diff --git a/third_party/nixpkgs/.github/CODEOWNERS b/third_party/nixpkgs/.github/CODEOWNERS index be54040ca2..64719a7bc3 100644 --- a/third_party/nixpkgs/.github/CODEOWNERS +++ b/third_party/nixpkgs/.github/CODEOWNERS @@ -82,13 +82,13 @@ /pkgs/development/interpreters/python/conda @DavHau # Haskell -/doc/languages-frameworks/haskell.section.md @cdepillabout @sternenseemann @maralorn -/maintainers/scripts/haskell @cdepillabout @sternenseemann @maralorn -/pkgs/development/compilers/ghc @cdepillabout @sternenseemann @maralorn -/pkgs/development/haskell-modules @cdepillabout @sternenseemann @maralorn -/pkgs/test/haskell @cdepillabout @sternenseemann @maralorn -/pkgs/top-level/release-haskell.nix @cdepillabout @sternenseemann @maralorn -/pkgs/top-level/haskell-packages.nix @cdepillabout @sternenseemann @maralorn +/doc/languages-frameworks/haskell.section.md @cdepillabout @sternenseemann @maralorn @expipiplus1 +/maintainers/scripts/haskell @cdepillabout @sternenseemann @maralorn @expipiplus1 +/pkgs/development/compilers/ghc @cdepillabout @sternenseemann @maralorn @expipiplus1 +/pkgs/development/haskell-modules @cdepillabout @sternenseemann @maralorn @expipiplus1 +/pkgs/test/haskell @cdepillabout @sternenseemann @maralorn @expipiplus1 +/pkgs/top-level/release-haskell.nix @cdepillabout @sternenseemann @maralorn @expipiplus1 +/pkgs/top-level/haskell-packages.nix @cdepillabout @sternenseemann @maralorn @expipiplus1 # Perl /pkgs/development/interpreters/perl @volth @stigtsp @@ -196,12 +196,12 @@ /nixos/tests/prometheus-exporters.nix @WilliButz # PHP interpreter, packages, extensions, tests and documentation -/doc/languages-frameworks/php.section.md @NixOS/php -/nixos/tests/php @NixOS/php -/pkgs/build-support/build-pecl.nix @NixOS/php -/pkgs/development/interpreters/php @NixOS/php -/pkgs/development/php-packages @NixOS/php -/pkgs/top-level/php-packages.nix @NixOS/php +/doc/languages-frameworks/php.section.md @NixOS/php @aanderse @etu @globin @ma27 @talyz +/nixos/tests/php @NixOS/php @aanderse @etu @globin @ma27 @talyz +/pkgs/build-support/build-pecl.nix @NixOS/php @aanderse @etu @globin @ma27 @talyz +/pkgs/development/interpreters/php @jtojnar @NixOS/php @aanderse @etu @globin @ma27 @talyz +/pkgs/development/php-packages @NixOS/php @aanderse @etu @globin @ma27 @talyz +/pkgs/top-level/php-packages.nix @jtojnar @NixOS/php @aanderse @etu @globin @ma27 @talyz # Podman, CRI-O modules and related /nixos/modules/virtualisation/containers.nix @NixOS/podman @zowoq diff --git a/third_party/nixpkgs/.github/PULL_REQUEST_TEMPLATE.md b/third_party/nixpkgs/.github/PULL_REQUEST_TEMPLATE.md index 1c4d7aa066..27d959410b 100644 --- a/third_party/nixpkgs/.github/PULL_REQUEST_TEMPLATE.md +++ b/third_party/nixpkgs/.github/PULL_REQUEST_TEMPLATE.md @@ -23,8 +23,8 @@ Reviewing guidelines: https://nixos.org/manual/nixpkgs/unstable/#chap-reviewing- - [ ] Tested via one or more NixOS test(s) if existing and applicable for the change (look inside [nixos/tests](https://github.com/NixOS/nixpkgs/blob/master/nixos/tests)) - [ ] Tested compilation of all pkgs that depend on this change using `nix-shell -p nixpkgs-review --run "nixpkgs-review wip"` - [ ] Tested execution of all binary files (usually in `./result/bin/`) -- [21.11 Release Notes](https://github.com/NixOS/nixpkgs/blob/master/.github/CONTRIBUTING.md#generating-2111-release-notes) +- [21.11 Release Notes (or backporting 21.05 Relase notes)](https://github.com/NixOS/nixpkgs/blob/master/CONTRIBUTING.md#generating-2111-release-notes) - [ ] (Package updates) Added a release notes entry if the change is major or breaking - [ ] (Module updates) Added a release notes entry if the change is significant - [ ] (Module addition) Added a release notes entry if adding a new NixOS module -- [ ] Fits [CONTRIBUTING.md](https://github.com/NixOS/nixpkgs/blob/master/.github/CONTRIBUTING.md). +- [ ] Fits [CONTRIBUTING.md](https://github.com/NixOS/nixpkgs/blob/master/CONTRIBUTING.md). diff --git a/third_party/nixpkgs/.github/workflows/backport.yml b/third_party/nixpkgs/.github/workflows/backport.yml index 766b5aa831..bea970f02d 100644 --- a/third_party/nixpkgs/.github/workflows/backport.yml +++ b/third_party/nixpkgs/.github/workflows/backport.yml @@ -5,7 +5,7 @@ on: jobs: backport: name: Backport Pull Request - if: github.repository_owner == 'NixOS' && github.event.pull_request.merged == true + if: github.repository_owner == 'NixOS' && github.event.pull_request.merged == true && (github.event_name != 'labeled' || startsWith('backport', github.event.label.name)) runs-on: ubuntu-latest steps: - uses: actions/checkout@v2 @@ -15,9 +15,15 @@ jobs: ref: ${{ github.event.pull_request.head.sha }} - name: Create backport PRs # should be kept in sync with `version` - uses: zeebe-io/backport-action@9b8949dcd4295d364b0939f07d0c7593598d26cd + uses: zeebe-io/backport-action@2b994724142df0774855690db56bc6308fb99ffa with: + # Config README: https://github.com/zeebe-io/backport-action#backport-action github_token: ${{ secrets.GITHUB_TOKEN }} github_workspace: ${{ github.workspace }} # should be kept in sync with `uses` - version: 9b8949dcd4295d364b0939f07d0c7593598d26cd + version: 2b994724142df0774855690db56bc6308fb99ffa + pull_description: |- + Bot-based backport to `${target_branch}`, triggered by a label in #${pull_number}. + + * [ ] Before merging, ensure that this backport complies with the [Criteria for Backporting](https://github.com/NixOS/nixpkgs/blob/master/CONTRIBUTING.md#criteria-for-backporting-changes). + * Even as a non-commiter, if you find that it does not comply, leave a comment. diff --git a/third_party/nixpkgs/.github/workflows/direct-push.yml b/third_party/nixpkgs/.github/workflows/direct-push.yml index 6177004295..459475c3c6 100644 --- a/third_party/nixpkgs/.github/workflows/direct-push.yml +++ b/third_party/nixpkgs/.github/workflows/direct-push.yml @@ -17,6 +17,9 @@ jobs: run: | ISMERGE=$(curl -H 'Accept: application/vnd.github.groot-preview+json' -H "authorization: Bearer ${{ secrets.GITHUB_TOKEN }}" https://api.github.com/repos/${{ env.GITHUB_REPOSITORY }}/commits/${{ env.GITHUB_SHA }}/pulls | jq -r '.[] | select(.merge_commit_sha == "${{ env.GITHUB_SHA }}") | any') echo "::set-output name=ismerge::$ISMERGE" + # github events are eventually consistent, so wait until changes propagate to thier DB + - run: sleep 60 + if: steps.ismerge.outputs.ismerge != 'true' - name: Warn if the commit was a direct push if: steps.ismerge.outputs.ismerge != 'true' uses: peter-evans/commit-comment@v1 diff --git a/third_party/nixpkgs/.github/workflows/rebase.yml b/third_party/nixpkgs/.github/workflows/rebase.yml deleted file mode 100644 index 47e8f4e4e4..0000000000 --- a/third_party/nixpkgs/.github/workflows/rebase.yml +++ /dev/null @@ -1,134 +0,0 @@ -on: - issue_comment: - types: - - created - -# This action allows people with write access to the repo to rebase a PRs base branch -# by commenting `/rebase ${branch}` on the PR while avoiding CODEOWNER notifications. - -jobs: - rebase: - runs-on: ubuntu-latest - if: github.repository_owner == 'NixOS' && github.event.issue.pull_request != '' && contains(github.event.comment.body, '/rebase') - steps: - - uses: peter-evans/create-or-update-comment@v1 - with: - comment-id: ${{ github.event.comment.id }} - reactions: eyes - - uses: scherermichael-oss/action-has-permission@1.0.6 - id: check-write-access - with: - required-permission: write - env: - GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} - - name: check permissions - run: | - echo "Commenter doesn't have write access to the repo" - exit 1 - if: "! steps.check-write-access.outputs.has-permission" - - name: setup - run: | - curl "https://api.github.com/repos/${{ github.repository }}/pulls/${{ github.event.issue.number }}" 2>/dev/null >pr.json - cat <>"$GITHUB_ENV" - CAN_MODIFY=$(jq -r '.maintainer_can_modify' pr.json) - COMMITS=$(jq -r '.commits' pr.json) - CURRENT_BASE=$(jq -r '.base.ref' pr.json) - PR_BRANCH=$(jq -r '.head.ref' pr.json) - COMMENT_BRANCH=$(echo ${{ github.event.comment.body }} | awk "/^\/rebase / {print \$2}") - PULL_REQUEST=${{ github.event.issue.number }} - EOF - rm pr.json - - name: check branch - env: - PERMANENT_BRANCHES: "haskell-updates|master|nixos|nixpkgs|python-unstable|release|staging" - VALID_BRANCHES: "haskell-updates|master|python-unstable|release-20.09|release-21.05|staging|staging-20.09|staging-21.05|staging-next|staging-next-21.05" - run: | - message() { - cat < $@ + $(PANDOC) $^ -t docbook \ + $(pandoc_flags) \ + -o $@ %.chapter.xml: %.chapter.md - pandoc $^ -t docbook \ + $(PANDOC) $^ -t docbook \ --top-level-division=chapter \ - --extract-media=media \ - --lua-filter=$(PANDOC_LUA_FILTERS_DIR)/diagram-generator.lua \ - -f markdown+smart \ - | cat > $@ + $(pandoc_flags) \ + -o $@ diff --git a/third_party/nixpkgs/doc/builders/fetchers.chapter.md b/third_party/nixpkgs/doc/builders/fetchers.chapter.md index c70e3020bb..30d0653448 100644 --- a/third_party/nixpkgs/doc/builders/fetchers.chapter.md +++ b/third_party/nixpkgs/doc/builders/fetchers.chapter.md @@ -20,59 +20,58 @@ The main difference between `fetchurl` and `fetchzip` is in how they store the c `fetchpatch` works very similarly to `fetchurl` with the same arguments expected. It expects patch files as a source and performs normalization on them before computing the checksum. For example it will remove comments or other unstable parts that are sometimes added by version control systems and can change over time. - Other fetcher functions allow you to add source code directly from a VCS such as subversion or git. These are mostly straightforward nambes based on the name of the command used with the VCS system. Because they give you a working repository, they act most like `fetchzip`. -## `fetchsvn` +## `fetchsvn` {#fetchsvn} Used with Subversion. Expects `url` to a Subversion directory, `rev`, and `sha256`. -## `fetchgit` +## `fetchgit` {#fetchgit} Used with Git. Expects `url` to a Git repo, `rev`, and `sha256`. `rev` in this case can be full the git commit id (SHA1 hash) or a tag name like `refs/tags/v1.0`. Additionally the following optional arguments can be given: `fetchSubmodules = true` makes `fetchgit` also fetch the submodules of a repository. If `deepClone` is set to true, the entire repository is cloned as opposing to just creating a shallow clone. `deepClone = true` also implies `leaveDotGit = true` which means that the `.git` directory of the clone won't be removed after checkout. -## `fetchfossil` +## `fetchfossil` {#fetchfossil} Used with Fossil. Expects `url` to a Fossil archive, `rev`, and `sha256`. -## `fetchcvs` +## `fetchcvs` {#fetchcvs} Used with CVS. Expects `cvsRoot`, `tag`, and `sha256`. -## `fetchhg` +## `fetchhg` {#fetchhg} Used with Mercurial. Expects `url`, `rev`, and `sha256`. A number of fetcher functions wrap part of `fetchurl` and `fetchzip`. They are mainly convenience functions intended for commonly used destinations of source code in Nixpkgs. These wrapper fetchers are listed below. -## `fetchFromGitHub` +## `fetchFromGitHub` {#fetchfromgithub} `fetchFromGitHub` expects four arguments. `owner` is a string corresponding to the GitHub user or organization that controls this repository. `repo` corresponds to the name of the software repository. These are located at the top of every GitHub HTML page as `owner`/`repo`. `rev` corresponds to the Git commit hash or tag (e.g `v1.0`) that will be downloaded from Git. Finally, `sha256` corresponds to the hash of the extracted directory. Again, other hash algorithms are also available but `sha256` is currently preferred. `fetchFromGitHub` uses `fetchzip` to download the source archive generated by GitHub for the specified revision. If `leaveDotGit`, `deepClone` or `fetchSubmodules` are set to `true`, `fetchFromGitHub` will use `fetchgit` instead. Refer to its section for documentation of these options. -## `fetchFromGitLab` +## `fetchFromGitLab` {#fetchfromgitlab} This is used with GitLab repositories. The arguments expected are very similar to fetchFromGitHub above. -## `fetchFromGitiles` +## `fetchFromGitiles` {#fetchfromgitiles} This is used with Gitiles repositories. The arguments expected are similar to fetchgit. -## `fetchFromBitbucket` +## `fetchFromBitbucket` {#fetchfrombitbucket} This is used with BitBucket repositories. The arguments expected are very similar to fetchFromGitHub above. -## `fetchFromSavannah` +## `fetchFromSavannah` {#fetchfromsavannah} This is used with Savannah repositories. The arguments expected are very similar to fetchFromGitHub above. -## `fetchFromRepoOrCz` +## `fetchFromRepoOrCz` {#fetchfromrepoorcz} This is used with repo.or.cz repositories. The arguments expected are very similar to fetchFromGitHub above. -## `fetchFromSourcehut` +## `fetchFromSourcehut` {#fetchfromsourcehut} This is used with sourcehut repositories. The arguments expected are very similar to fetchFromGitHub above. Don't forget the tilde (~) in front of the user name! diff --git a/third_party/nixpkgs/doc/builders/images/appimagetools.section.md b/third_party/nixpkgs/doc/builders/images/appimagetools.section.md index 7ab4e4e9d8..67e63dc5f6 100644 --- a/third_party/nixpkgs/doc/builders/images/appimagetools.section.md +++ b/third_party/nixpkgs/doc/builders/images/appimagetools.section.md @@ -2,7 +2,7 @@ `pkgs.appimageTools` is a set of functions for extracting and wrapping [AppImage](https://appimage.org/) files. They are meant to be used if traditional packaging from source is infeasible, or it would take too long. To quickly run an AppImage file, `pkgs.appimage-run` can be used as well. -::: warning +::: {.warning} The `appimageTools` API is unstable and may be subject to backwards-incompatible changes in the future. ::: diff --git a/third_party/nixpkgs/doc/builders/images/dockertools.section.md b/third_party/nixpkgs/doc/builders/images/dockertools.section.md index 2d21eb1c2e..bfe1d17a60 100644 --- a/third_party/nixpkgs/doc/builders/images/dockertools.section.md +++ b/third_party/nixpkgs/doc/builders/images/dockertools.section.md @@ -1,6 +1,6 @@ # pkgs.dockerTools {#sec-pkgs-dockerTools} -`pkgs.dockerTools` is a set of functions for creating and manipulating Docker images according to the [ Docker Image Specification v1.2.0 ](https://github.com/moby/moby/blob/master/image/spec/v1.2.md#docker-image-specification-v120). Docker itself is not used to perform any of the operations done by these functions. +`pkgs.dockerTools` is a set of functions for creating and manipulating Docker images according to the [Docker Image Specification v1.2.0](https://github.com/moby/moby/blob/master/image/spec/v1.2.md#docker-image-specification-v120). Docker itself is not used to perform any of the operations done by these functions. ## buildImage {#ssec-pkgs-dockerTools-buildImage} @@ -52,7 +52,7 @@ The above example will build a Docker image `redis/latest` from the given base i > **_NOTE:_** Using this parameter requires the `kvm` device to be available. -- `config` is used to specify the configuration of the containers that will be started off the built image in Docker. The available options are listed in the [ Docker Image Specification v1.2.0 ](https://github.com/moby/moby/blob/master/image/spec/v1.2.md#image-json-field-descriptions). +- `config` is used to specify the configuration of the containers that will be started off the built image in Docker. The available options are listed in the [Docker Image Specification v1.2.0](https://github.com/moby/moby/blob/master/image/spec/v1.2.md#image-json-field-descriptions). After the new layer has been created, its closure (to which `contents`, `config` and `runAsRoot` contribute) will be copied in the layer itself. Only new dependencies that are not already in the existing layers will be copied. diff --git a/third_party/nixpkgs/doc/builders/images/snaptools.section.md b/third_party/nixpkgs/doc/builders/images/snaptools.section.md index 9e1403b882..5f710d2de7 100644 --- a/third_party/nixpkgs/doc/builders/images/snaptools.section.md +++ b/third_party/nixpkgs/doc/builders/images/snaptools.section.md @@ -14,7 +14,7 @@ Currently, `makeSnap` does not support creating GUI stubs. The following expression packages GNU Hello as a Snapcraft snap. -```{#ex-snapTools-buildSnap-hello .nix} +``` {#ex-snapTools-buildSnap-hello .nix} let inherit (import { }) snapTools hello; in snapTools.makeSnap { @@ -35,7 +35,7 @@ in snapTools.makeSnap { Graphical programs require many more integrations with the host. This example uses Firefox as an example, because it is one of the most complicated programs we could package. -```{#ex-snapTools-buildSnap-firefox .nix} +``` {#ex-snapTools-buildSnap-firefox .nix} let inherit (import { }) snapTools firefox; in snapTools.makeSnap { diff --git a/third_party/nixpkgs/doc/builders/packages/cataclysm-dda.section.md b/third_party/nixpkgs/doc/builders/packages/cataclysm-dda.section.md index 0f908cb759..bfeacb47fe 100644 --- a/third_party/nixpkgs/doc/builders/packages/cataclysm-dda.section.md +++ b/third_party/nixpkgs/doc/builders/packages/cataclysm-dda.section.md @@ -1,6 +1,6 @@ # Cataclysm: Dark Days Ahead {#cataclysm-dark-days-ahead} -## How to install Cataclysm DDA +## How to install Cataclysm DDA {#how-to-install-cataclysm-dda} To install the latest stable release of Cataclysm DDA to your profile, execute `nix-env -f "" -iA cataclysm-dda`. For the curses build (build @@ -34,7 +34,7 @@ cataclysm-dda.override { } ``` -## Important note for overriding packages +## Important note for overriding packages {#important-note-for-overriding-packages} After applying `overrideAttrs`, you need to fix `passthru.pkgs` and `passthru.withMods` attributes either manually or by using `attachPkgs`: @@ -69,7 +69,7 @@ in goodExample2.withMods (_: []) # parallel building enabled ``` -## Customizing with mods +## Customizing with mods {#customizing-with-mods} To install Cataclysm DDA with mods of your choice, you can use `withMods` attribute: diff --git a/third_party/nixpkgs/doc/builders/packages/elm.section.md b/third_party/nixpkgs/doc/builders/packages/elm.section.md index 53087c0e9d..ae223c802d 100644 --- a/third_party/nixpkgs/doc/builders/packages/elm.section.md +++ b/third_party/nixpkgs/doc/builders/packages/elm.section.md @@ -6,6 +6,6 @@ To start a development environment do nix-shell -p elmPackages.elm elmPackages.elm-format ``` -To update the Elm compiler, see nixpkgs/pkgs/development/compilers/elm/README.md. +To update the Elm compiler, see `nixpkgs/pkgs/development/compilers/elm/README.md`. To package Elm applications, [read about elm2nix](https://github.com/hercules-ci/elm2nix#elm2nix). diff --git a/third_party/nixpkgs/doc/builders/packages/firefox.section.md b/third_party/nixpkgs/doc/builders/packages/firefox.section.md index acf31e188c..b7c430db23 100644 --- a/third_party/nixpkgs/doc/builders/packages/firefox.section.md +++ b/third_party/nixpkgs/doc/builders/packages/firefox.section.md @@ -1,6 +1,6 @@ # Firefox {#sec-firefox} -## Build wrapped Firefox with extensions and policies +## Build wrapped Firefox with extensions and policies {#build-wrapped-firefox-with-extensions-and-policies} The `wrapFirefox` function allows to pass policies, preferences and extension that are available to firefox. With the help of `fetchFirefoxAddon` this allows build a firefox version that already comes with addons pre-installed: diff --git a/third_party/nixpkgs/doc/builders/packages/opengl.section.md b/third_party/nixpkgs/doc/builders/packages/opengl.section.md index 6866bf8922..ee7f3af98c 100644 --- a/third_party/nixpkgs/doc/builders/packages/opengl.section.md +++ b/third_party/nixpkgs/doc/builders/packages/opengl.section.md @@ -4,11 +4,11 @@ OpenGL support varies depending on which hardware is used and which drivers are Broadly, we support both GL vendors: Mesa and NVIDIA. -## NixOS Desktop +## NixOS Desktop {#nixos-desktop} The NixOS desktop or other non-headless configurations are the primary target for OpenGL libraries and applications. The current solution for discovering which drivers are available is based on [libglvnd](https://gitlab.freedesktop.org/glvnd/libglvnd). `libglvnd` performs "vendor-neutral dispatch", trying a variety of techniques to find the system's GL implementation. In practice, this will be either via standard GLX for X11 users or EGL for Wayland users, and supporting either NVIDIA or Mesa extensions. -## Nix on GNU/Linux +## Nix on GNU/Linux {#nix-on-gnulinux} If you are using a non-NixOS GNU/Linux/X11 desktop with free software video drivers, consider launching OpenGL-dependent programs from Nixpkgs with Nixpkgs versions of `libglvnd` and `mesa.drivers` in `LD_LIBRARY_PATH`. For Mesa drivers, the Linux kernel version doesn't have to match nixpkgs. diff --git a/third_party/nixpkgs/doc/builders/packages/steam.section.md b/third_party/nixpkgs/doc/builders/packages/steam.section.md index e33f1192f7..d7bb6e69d7 100644 --- a/third_party/nixpkgs/doc/builders/packages/steam.section.md +++ b/third_party/nixpkgs/doc/builders/packages/steam.section.md @@ -20,6 +20,7 @@ Use `programs.steam.enable = true;` if you want to add steam to systemPackages a ## Troubleshooting {#sec-steam-troub} - **Steam fails to start. What do I do?** + Try to run ```ShellSession @@ -32,24 +33,26 @@ Use `programs.steam.enable = true;` if you want to add steam to systemPackages a - The `newStdcpp` parameter was removed since NixOS 17.09 and should not be needed anymore. - Steam ships statically linked with a version of libcrypto that conflics with the one dynamically loaded by radeonsi_dri.so. If you get the error + ``` steam.sh: line 713: 7842 Segmentation fault (core dumped) ``` + have a look at [this pull request](https://github.com/NixOS/nixpkgs/pull/20269). - **Java** 1. There is no java in steam chrootenv by default. If you get a message like - ``` - /home/foo/.local/share/Steam/SteamApps/common/towns/towns.sh: line 1: java: command not found - ``` + ``` + /home/foo/.local/share/Steam/SteamApps/common/towns/towns.sh: line 1: java: command not found + ``` - You need to add + you need to add - ```nix - steam.override { withJava = true; }; - ``` + ```nix + steam.override { withJava = true; }; + ``` ## steam-run {#sec-steam-run} @@ -57,9 +60,9 @@ The FHS-compatible chroot used for steam can also be used to run other linux gam ```nix pkgs.steam.override ({ - nativeOnly = true; - newStdcpp = true; - }).run + nativeOnly = true; + newStdcpp = true; +}).run ``` to your configuration, rebuild, and run the game with diff --git a/third_party/nixpkgs/doc/builders/packages/xorg.section.md b/third_party/nixpkgs/doc/builders/packages/xorg.section.md index be220a2540..ae885f9234 100644 --- a/third_party/nixpkgs/doc/builders/packages/xorg.section.md +++ b/third_party/nixpkgs/doc/builders/packages/xorg.section.md @@ -2,7 +2,7 @@ The Nix expressions for the X.org packages reside in `pkgs/servers/x11/xorg/default.nix`. This file is automatically generated from lists of tarballs in an X.org release. As such it should not be modified directly; rather, you should modify the lists, the generator script or the file `pkgs/servers/x11/xorg/overrides.nix`, in which you can override or add to the derivations produced by the generator. -## Katamari Tarballs +## Katamari Tarballs {#katamari-tarballs} X.org upstream releases used to include [katamari](https://en.wiktionary.org/wiki/%E3%81%8B%E3%81%9F%E3%81%BE%E3%82%8A) releases, which included a holistic recommended version for each tarball, up until 7.7. To create a list of tarballs in a katamari release: @@ -14,11 +14,11 @@ cat $(PRINT_PATH=1 nix-prefetch-url $url | tail -n 1) \ | sort > "tarballs-$release.list" ``` -## Individual Tarballs +## Individual Tarballs {#individual-tarballs} The upstream release process for [X11R7.8](https://x.org/wiki/Releases/7.8/) does not include a planned katamari. Instead, each component of X.org is released as its own tarball. We maintain `pkgs/servers/x11/xorg/tarballs.list` as a list of tarballs for each individual package. This list includes X.org core libraries and protocol descriptions, extra newer X11 interface libraries, like `xorg.libxcb`, and classic utilities which are largely unused but still available if needed, like `xorg.imake`. -## Generating Nix Expressions +## Generating Nix Expressions {#generating-nix-expressions} The generator is invoked as follows: @@ -29,6 +29,6 @@ cd pkgs/servers/x11/xorg For each of the tarballs in the `.list` files, the script downloads it, unpacks it, and searches its `configure.ac` and `*.pc.in` files for dependencies. This information is used to generate `default.nix`. The generator caches downloaded tarballs between runs. Pay close attention to the `NOT FOUND: $NAME` messages at the end of the run, since they may indicate missing dependencies. (Some might be optional dependencies, however.) -## Overriding the Generator +## Overriding the Generator {#overriding-the-generator} If the expression for a package requires derivation attributes that the generator cannot figure out automatically (say, `patches` or a `postInstall` hook), you should modify `pkgs/servers/x11/xorg/overrides.nix`. diff --git a/third_party/nixpkgs/doc/builders/special/fhs-environments.section.md b/third_party/nixpkgs/doc/builders/special/fhs-environments.section.md index 512a31cae0..146ded5324 100644 --- a/third_party/nixpkgs/doc/builders/special/fhs-environments.section.md +++ b/third_party/nixpkgs/doc/builders/special/fhs-environments.section.md @@ -28,7 +28,7 @@ One can create a simple environment using a `shell.nix` like that: name = "simple-x11-env"; targetPkgs = pkgs: (with pkgs; [ udev - alsaLib + alsa-lib ]) ++ (with pkgs.xorg; [ libX11 libXcursor @@ -36,7 +36,7 @@ One can create a simple environment using a `shell.nix` like that: ]); multiPkgs = pkgs: (with pkgs; [ udev - alsaLib + alsa-lib ]); runScript = "bash"; }).env diff --git a/third_party/nixpkgs/doc/builders/trivial-builders.chapter.md b/third_party/nixpkgs/doc/builders/trivial-builders.chapter.md index bc1317cc49..46620e1b45 100644 --- a/third_party/nixpkgs/doc/builders/trivial-builders.chapter.md +++ b/third_party/nixpkgs/doc/builders/trivial-builders.chapter.md @@ -37,7 +37,7 @@ This works just like `runCommand`. The only difference is that it also provides Variant of `runCommand` that forces the derivation to be built locally, it is not substituted. This is intended for very cheap commands (<1s execution time). It saves on the network roundrip and can speed up a build. -::: note +::: {.note} This sets [`allowSubstitutes` to `false`](https://nixos.org/nix/manual/#adv-attr-allowSubstitutes), so only use `runCommandLocal` if you are certain the user will always have a builder for the `system` of the derivation. This should be true for most trivial use cases (e.g. just copying some files to a different location or adding symlinks), because there the `system` is usually the same as `builtins.currentSystem`. ::: diff --git a/third_party/nixpkgs/doc/contributing/coding-conventions.chapter.md b/third_party/nixpkgs/doc/contributing/coding-conventions.chapter.md index 1eaa06a659..e42ba512b9 100644 --- a/third_party/nixpkgs/doc/contributing/coding-conventions.chapter.md +++ b/third_party/nixpkgs/doc/contributing/coding-conventions.chapter.md @@ -6,7 +6,7 @@ - Do not use tab characters, i.e. configure your editor to use soft tabs. For instance, use `(setq-default indent-tabs-mode nil)` in Emacs. Everybody has different tab settings so it’s asking for trouble. -- Use `lowerCamelCase` for variable names, not `UpperCamelCase`. Note, this rule does not apply to package attribute names, which instead follow the rules in . +- Use `lowerCamelCase` for variable names, not `UpperCamelCase`. Note, this rule does not apply to package attribute names, which instead follow the rules in [](#sec-package-naming). - Function calls with attribute set arguments are written as @@ -209,7 +209,7 @@ There are a few naming guidelines: - Dashes in the package name _should_ be preserved in new variable names, rather than converted to underscores or camel cased — e.g., `http-parser` instead of `http_parser` or `httpParser`. The hyphenated style is preferred in all three package names. -- If there are multiple versions of a package, this _should_ be reflected in the variable names in `all-packages.nix`, e.g. `json-c-0-9` and `json-c-0-11`. If there is an obvious “default” version, make an attribute like `json-c = json-c-0-9;`. See also +- If there are multiple versions of a package, this _should_ be reflected in the variable names in `all-packages.nix`, e.g. `json-c-0-9` and `json-c-0-11`. If there is an obvious “default” version, make an attribute like `json-c = json-c-0-9;`. See also [](#sec-versioning) ## File naming and organisation {#sec-organisation} @@ -462,9 +462,9 @@ Preferred source hash type is sha256. There are several ways to get it. For package updates it is enough to change one symbol to make hash fake. For new packages, you can use `lib.fakeSha256`, `lib.fakeSha512` or any other fake hash. - This is last resort method when reconstructing source URL is non-trivial and `nix-prefetch-url -A` isn't applicable (for example, [one of `kodi` dependencies](https://github.com/NixOS/nixpkgs/blob/d2ab091dd308b99e4912b805a5eb088dd536adb9/pkgs/applications/video/kodi/default.nix#L73")). The easiest way then would be replace hash with a fake one and rebuild. Nix build will fail and error message will contain desired hash. + This is last resort method when reconstructing source URL is non-trivial and `nix-prefetch-url -A` isn’t applicable (for example, [one of `kodi` dependencies](https://github.com/NixOS/nixpkgs/blob/d2ab091dd308b99e4912b805a5eb088dd536adb9/pkgs/applications/video/kodi/default.nix#L73)). The easiest way then would be replace hash with a fake one and rebuild. Nix build will fail and error message will contain desired hash. -::: warning +::: {.warning} This method has security problems. Check below for details. ::: diff --git a/third_party/nixpkgs/doc/contributing/contributing-to-documentation.chapter.md b/third_party/nixpkgs/doc/contributing/contributing-to-documentation.chapter.md index 7fd4b93f0d..2f7ae32259 100644 --- a/third_party/nixpkgs/doc/contributing/contributing-to-documentation.chapter.md +++ b/third_party/nixpkgs/doc/contributing/contributing-to-documentation.chapter.md @@ -1,6 +1,6 @@ # Contributing to this documentation {#chap-contributing} -The DocBook sources of the Nixpkgs manual are in the [doc](https://github.com/NixOS/nixpkgs/tree/master/doc) subdirectory of the Nixpkgs repository. +The sources of the Nixpkgs manual are in the [doc](https://github.com/NixOS/nixpkgs/tree/master/doc) subdirectory of the Nixpkgs repository. The manual is still partially written in DocBook but it is progressively being converted to [Markdown](#sec-contributing-markup). You can quickly check your edits with `make`: @@ -22,3 +22,78 @@ $ nix-shell ``` If the build succeeds, the manual will be in `./result/share/doc/nixpkgs/manual.html`. + +## Syntax {#sec-contributing-markup} + +As per [RFC 0072](https://github.com/NixOS/rfcs/pull/72), all new documentation content should be written in [CommonMark](https://commonmark.org/) Markdown dialect. + +Additionally, the following syntax extensions are currently used: + +- []{#ssec-contributing-markup-anchors} + Explicitly defined **anchors** on headings, to allow linking to sections. These should be always used, to ensure the anchors can be linked even when the heading text changes, and to prevent conflicts between [automatically assigned identifiers](https://github.com/jgm/commonmark-hs/blob/master/commonmark-extensions/test/auto_identifiers.md). + + It uses the widely compatible [header attributes](https://github.com/jgm/commonmark-hs/blob/master/commonmark-extensions/test/attributes.md) syntax: + + ```markdown + ## Syntax {#sec-contributing-markup} + ``` + +- []{#ssec-contributing-markup-anchors-inline} + **Inline anchors**, which allow linking arbitrary place in the text (e.g. individual list items, sentences…). + + They are defined using a hybrid of the link syntax with the attributes syntax known from headings, called [bracketed spans](https://github.com/jgm/commonmark-hs/blob/master/commonmark-extensions/test/bracketed_spans.md): + + ```markdown + - []{#ssec-gnome-hooks-glib} `glib` setup hook will populate `GSETTINGS_SCHEMAS_PATH` and then `wrapGAppsHook` will prepend it to `XDG_DATA_DIRS`. + ``` + +- []{#ssec-contributing-markup-automatic-links} + If you **omit a link text** for a link pointing to a section, the text will be substituted automatically. For example, `[](#chap-contributing)` will result in [](#chap-contributing). + + This syntax is taken from [MyST](https://myst-parser.readthedocs.io/en/latest/using/syntax.html#targets-and-cross-referencing). + +- []{#ssec-contributing-markup-admonitions} + **Admonitions**, set off from the text to bring attention to something. + + It uses pandoc’s [fenced `div`s syntax](https://github.com/jgm/commonmark-hs/blob/master/commonmark-extensions/test/fenced_divs.md): + + ```markdown + ::: {.warning} + This is a warning + ::: + ``` + + which renders as + + > ::: {.warning} + > This is a warning. + > ::: + + The following are supported: + + - [`caution`](https://tdg.docbook.org/tdg/5.0/caution.html) + - [`important`](https://tdg.docbook.org/tdg/5.0/important.html) + - [`note`](https://tdg.docbook.org/tdg/5.0/note.html) + - [`tip`](https://tdg.docbook.org/tdg/5.0/tip.html) + - [`warning`](https://tdg.docbook.org/tdg/5.0/warning.html) + +- []{#ssec-contributing-markup-definition-lists} + [**Definition lists**](https://github.com/jgm/commonmark-hs/blob/master/commonmark-extensions/test/definition_lists.md), for defining a group of terms: + + ```markdown + pear + : green or yellow bulbous fruit + + watermelon + : green fruit with red flesh + ``` + + which renders as + + > pear + > : green or yellow bulbous fruit + > + > watermelon + > : green fruit with red flesh + +For contributing to the legacy parts, please see [DocBook: The Definitive Guide](https://tdg.docbook.org/) or the [DocBook rocks! primer](https://web.archive.org/web/20200816233747/https://docbook.rocks/). diff --git a/third_party/nixpkgs/doc/contributing/quick-start.chapter.md b/third_party/nixpkgs/doc/contributing/quick-start.chapter.md index 85c3897221..96b30d3822 100644 --- a/third_party/nixpkgs/doc/contributing/quick-start.chapter.md +++ b/third_party/nixpkgs/doc/contributing/quick-start.chapter.md @@ -9,7 +9,7 @@ To add a package to Nixpkgs: $ cd nixpkgs ``` -2. Find a good place in the Nixpkgs tree to add the Nix expression for your package. For instance, a library package typically goes into `pkgs/development/libraries/pkgname`, while a web browser goes into `pkgs/applications/networking/browsers/pkgname`. See for some hints on the tree organisation. Create a directory for your package, e.g. +2. Find a good place in the Nixpkgs tree to add the Nix expression for your package. For instance, a library package typically goes into `pkgs/development/libraries/pkgname`, while a web browser goes into `pkgs/applications/networking/browsers/pkgname`. See [](#sec-organisation) for some hints on the tree organisation. Create a directory for your package, e.g. ```ShellSession $ mkdir pkgs/development/libraries/libfoo diff --git a/third_party/nixpkgs/doc/contributing/reviewing-contributions.chapter.md b/third_party/nixpkgs/doc/contributing/reviewing-contributions.chapter.md index 0dfe22199c..3f3ba60947 100644 --- a/third_party/nixpkgs/doc/contributing/reviewing-contributions.chapter.md +++ b/third_party/nixpkgs/doc/contributing/reviewing-contributions.chapter.md @@ -1,6 +1,6 @@ # Reviewing contributions {#chap-reviewing-contributions} -::: warning +::: {.warning} The following section is a draft, and the policy for reviewing is still being discussed in issues such as [#11166](https://github.com/NixOS/nixpkgs/issues/11166) and [#20836](https://github.com/NixOS/nixpkgs/issues/20836). ::: @@ -35,15 +35,18 @@ Reviewing process: - Building the package locally. - pull requests are often targeted to the master or staging branch, and building the pull request locally when it is submitted can trigger many source builds. - It is possible to rebase the changes on nixos-unstable or nixpkgs-unstable for easier review by running the following commands from a nixpkgs clone. + ```ShellSession $ git fetch origin nixos-unstable $ git fetch origin pull/PRNUMBER/head $ git rebase --onto nixos-unstable BASEBRANCH FETCH_HEAD ``` + - The first command fetches the nixos-unstable branch. - The second command fetches the pull request changes, `PRNUMBER` is the number at the end of the pull request title and `BASEBRANCH` the base branch of the pull request. - The third command rebases the pull request changes to the nixos-unstable branch. - The [nixpkgs-review](https://github.com/Mic92/nixpkgs-review) tool can be used to review a pull request content in a single command. `PRNUMBER` should be replaced by the number at the end of the pull request title. You can also provide the full github pull request url. + ```ShellSession $ nix-shell -p nixpkgs-review --run "nixpkgs-review pr PRNUMBER" ``` diff --git a/third_party/nixpkgs/doc/contributing/submitting-changes.chapter.md b/third_party/nixpkgs/doc/contributing/submitting-changes.chapter.md index 0a46502009..221ba30061 100644 --- a/third_party/nixpkgs/doc/contributing/submitting-changes.chapter.md +++ b/third_party/nixpkgs/doc/contributing/submitting-changes.chapter.md @@ -62,7 +62,7 @@ - Push your changes to your fork of nixpkgs. - Create the pull request -- Follow [the contribution guidelines](https://github.com/NixOS/nixpkgs/blob/master/.github/CONTRIBUTING.md#submitting-changes). +- Follow [the contribution guidelines](https://github.com/NixOS/nixpkgs/blob/master/CONTRIBUTING.md#submitting-changes). ## Submitting security fixes {#submitting-changes-submitting-security-fixes} @@ -71,6 +71,7 @@ Security fixes are submitted in the same way as other changes and thus the same - If a new version fixing the vulnerability has been released, update the package; - If the security fix comes in the form of a patch and a CVE is available, then add the patch to the Nixpkgs tree, and apply it to the package. The name of the patch should be the CVE identifier, so e.g. `CVE-2019-13636.patch`; If a patch is fetched the name needs to be set as well, e.g.: + ```nix (fetchpatch { name = "CVE-2019-11068.patch"; @@ -89,7 +90,7 @@ There is currently no policy when to remove a package. Before removing a package, one should try to find a new maintainer or fix smaller issues first. -### Steps to remove a package from Nixpkgs +### Steps to remove a package from Nixpkgs {#steps-to-remove-a-package-from-nixpkgs} We use jbidwatcher as an example for a discontinued project here. @@ -100,6 +101,7 @@ We use jbidwatcher as an example for a discontinued project here. 1. Add an alias for the package name in `pkgs/top-level/aliases.nix` (There is also `pkgs/misc/vim-plugins/aliases.nix`. Package sets typically do not have aliases, so we can't add them there.) For example in this case: + ``` jbidwatcher = throw "jbidwatcher was discontinued in march 2021"; # added 2021-03-15 ``` @@ -191,7 +193,7 @@ It’s important to test any executables generated by a build when you change or ### Meets Nixpkgs contribution standards {#submitting-changes-contribution-standards} -The last checkbox is fits [CONTRIBUTING.md](https://github.com/NixOS/nixpkgs/blob/master/.github/CONTRIBUTING.md). The contributing document has detailed information on standards the Nix community has for commit messages, reviews, licensing of contributions you make to the project, etc\... Everyone should read and understand the standards the community has for contributing before submitting a pull request. +The last checkbox is fits [CONTRIBUTING.md](https://github.com/NixOS/nixpkgs/blob/master/CONTRIBUTING.md). The contributing document has detailed information on standards the Nix community has for commit messages, reviews, licensing of contributions you make to the project, etc\... Everyone should read and understand the standards the community has for contributing before submitting a pull request. ## Hotfixing pull requests {#submitting-changes-hotfixing-pull-requests} @@ -267,3 +269,14 @@ Other examples of reasons are: - Previously the build would fail due to, e.g., `getaddrinfo` not being defined - The previous download links were all broken - Crash when starting on some X11 systems + +#### Acceptable backport criteria + +The stable branch does have some changes which cannot be backported. Most notable are breaking changes. The desire is to have stable users be uninterrupted when updating packages. + +However, many changes are able to be backported, including: +- New Packages / Modules +- Security / Patch updates +- Version updates which include new functionality (but no breaking changes) +- Services which require a client to be up-to-date regardless. (E.g. `spotify`, `steam`, or `discord`) +- Security critical applications (E.g. `firefox`) diff --git a/third_party/nixpkgs/doc/doc-support/lib-function-docs.nix b/third_party/nixpkgs/doc/doc-support/lib-function-docs.nix index 5199b949e7..f6d613cac0 100644 --- a/third_party/nixpkgs/doc/doc-support/lib-function-docs.nix +++ b/third_party/nixpkgs/doc/doc-support/lib-function-docs.nix @@ -22,5 +22,6 @@ with pkgs; stdenv.mkDerivation { docgen lists 'List manipulation functions' docgen debug 'Debugging functions' docgen options 'NixOS / nixpkgs option handling' + docgen sources 'Source filtering functions' ''; } diff --git a/third_party/nixpkgs/doc/functions.xml b/third_party/nixpkgs/doc/functions.xml index 5a9240ec80..8ef530d307 100644 --- a/third_party/nixpkgs/doc/functions.xml +++ b/third_party/nixpkgs/doc/functions.xml @@ -7,8 +7,8 @@ The nixpkgs repository has several utility functions to manipulate Nix expressions. - - - - + + + + diff --git a/third_party/nixpkgs/doc/functions/debug.section.md b/third_party/nixpkgs/doc/functions/debug.section.md new file mode 100644 index 0000000000..b2d8589431 --- /dev/null +++ b/third_party/nixpkgs/doc/functions/debug.section.md @@ -0,0 +1,5 @@ +# Debugging Nix Expressions {#sec-debug} + +Nix is a unityped, dynamic language, this means every value can potentially appear anywhere. Since it is also non-strict, evaluation order and what ultimately is evaluated might surprise you. Therefore it is important to be able to debug nix expressions. + +In the `lib/debug.nix` file you will find a number of functions that help (pretty-)printing values while evaluation is running. You can even specify how deep these values should be printed recursively, and transform them on the fly. Please consult the docstrings in `lib/debug.nix` for usage information. diff --git a/third_party/nixpkgs/doc/functions/debug.xml b/third_party/nixpkgs/doc/functions/debug.xml deleted file mode 100644 index c27421f12e..0000000000 --- a/third_party/nixpkgs/doc/functions/debug.xml +++ /dev/null @@ -1,14 +0,0 @@ -
- Debugging Nix Expressions - - - Nix is a unityped, dynamic language, this means every value can potentially appear anywhere. Since it is also non-strict, evaluation order and what ultimately is evaluated might surprise you. Therefore it is important to be able to debug nix expressions. - - - - In the lib/debug.nix file you will find a number of functions that help (pretty-)printing values while evaluation is runnnig. You can even specify how deep these values should be printed recursively, and transform them on the fly. Please consult the docstrings in lib/debug.nix for usage information. - -
diff --git a/third_party/nixpkgs/doc/functions/generators.section.md b/third_party/nixpkgs/doc/functions/generators.section.md new file mode 100644 index 0000000000..d54e5027c7 --- /dev/null +++ b/third_party/nixpkgs/doc/functions/generators.section.md @@ -0,0 +1,56 @@ +# Generators {#sec-generators} +Generators are functions that create file formats from nix data structures, e. g. for configuration files. There are generators available for: `INI`, `JSON` and `YAML` + +All generators follow a similar call interface: `generatorName configFunctions data`, where `configFunctions` is an attrset of user-defined functions that format nested parts of the content. They each have common defaults, so often they do not need to be set manually. An example is `mkSectionName ? (name: libStr.escape [ "[" "]" ] name)` from the `INI` generator. It receives the name of a section and sanitizes it. The default `mkSectionName` escapes `[` and `]` with a backslash. + +Generators can be fine-tuned to produce exactly the file format required by your application/service. One example is an INI-file format which uses `: ` as separator, the strings `"yes"`/`"no"` as boolean values and requires all string values to be quoted: + +```nix +with lib; +let + customToINI = generators.toINI { + # specifies how to format a key/value pair + mkKeyValue = generators.mkKeyValueDefault { + # specifies the generated string for a subset of nix values + mkValueString = v: + if v == true then ''"yes"'' + else if v == false then ''"no"'' + else if isString v then ''"${v}"'' + # and delegats all other values to the default generator + else generators.mkValueStringDefault {} v; + } ":"; + }; + +# the INI file can now be given as plain old nix values +in customToINI { + main = { + pushinfo = true; + autopush = false; + host = "localhost"; + port = 42; + }; + mergetool = { + merge = "diff3"; + }; +} +``` + +This will produce the following INI file as nix string: + +```INI +[main] +autopush:"no" +host:"localhost" +port:42 +pushinfo:"yes" +str\:ange:"very::strange" + +[mergetool] +merge:"diff3" +``` + +::: {.note} +Nix store paths can be converted to strings by enclosing a derivation attribute like so: `"${drv}"`. +::: + +Detailed documentation for each generator can be found in `lib/generators.nix`. diff --git a/third_party/nixpkgs/doc/functions/generators.xml b/third_party/nixpkgs/doc/functions/generators.xml deleted file mode 100644 index 9ce1f85eb1..0000000000 --- a/third_party/nixpkgs/doc/functions/generators.xml +++ /dev/null @@ -1,74 +0,0 @@ -
- Generators - - - Generators are functions that create file formats from nix data structures, e. g. for configuration files. There are generators available for: INI, JSON and YAML - - - - All generators follow a similar call interface: generatorName configFunctions data, where configFunctions is an attrset of user-defined functions that format nested parts of the content. They each have common defaults, so often they do not need to be set manually. An example is mkSectionName ? (name: libStr.escape [ "[" "]" ] name) from the INI generator. It receives the name of a section and sanitizes it. The default mkSectionName escapes [ and ] with a backslash. - - - - Generators can be fine-tuned to produce exactly the file format required by your application/service. One example is an INI-file format which uses : as separator, the strings "yes"/"no" as boolean values and requires all string values to be quoted: - - - -with lib; -let - customToINI = generators.toINI { - # specifies how to format a key/value pair - mkKeyValue = generators.mkKeyValueDefault { - # specifies the generated string for a subset of nix values - mkValueString = v: - if v == true then ''"yes"'' - else if v == false then ''"no"'' - else if isString v then ''"${v}"'' - # and delegats all other values to the default generator - else generators.mkValueStringDefault {} v; - } ":"; - }; - -# the INI file can now be given as plain old nix values -in customToINI { - main = { - pushinfo = true; - autopush = false; - host = "localhost"; - port = 42; - }; - mergetool = { - merge = "diff3"; - }; -} - - - - This will produce the following INI file as nix string: - - - -[main] -autopush:"no" -host:"localhost" -port:42 -pushinfo:"yes" -str\:ange:"very::strange" - -[mergetool] -merge:"diff3" - - - - - Nix store paths can be converted to strings by enclosing a derivation attribute like so: "${drv}". - - - - - Detailed documentation for each generator can be found in lib/generators.nix. - -
diff --git a/third_party/nixpkgs/doc/functions/library.xml b/third_party/nixpkgs/doc/functions/library.xml index 6ffb944b5a..21bcf5b88c 100644 --- a/third_party/nixpkgs/doc/functions/library.xml +++ b/third_party/nixpkgs/doc/functions/library.xml @@ -25,4 +25,6 @@ + + diff --git a/third_party/nixpkgs/doc/functions/library/attrsets.xml b/third_party/nixpkgs/doc/functions/library/attrsets.xml index 912d6d4779..ef132514da 100644 --- a/third_party/nixpkgs/doc/functions/library/attrsets.xml +++ b/third_party/nixpkgs/doc/functions/library/attrsets.xml @@ -166,7 +166,7 @@ lib.attrsets.setAttrByPath [ "a" "b" ] 3 - Like except without a default, and it will throw if the value doesn't exist. + Like [](#function-library-lib.attrsets.attrByPath) except without a default, and it will throw if the value doesn't exist. @@ -1480,7 +1480,7 @@ lib.attrsets.zipAttrsWith - Merge sets of attributes and combine each attribute value in to a list. Similar to where the merge function returns a list of all values. + Merge sets of attributes and combine each attribute value in to a list. Similar to [](#function-library-lib.attrsets.zipAttrsWith) where the merge function returns a list of all values. diff --git a/third_party/nixpkgs/doc/functions/nix-gitignore.section.md b/third_party/nixpkgs/doc/functions/nix-gitignore.section.md new file mode 100644 index 0000000000..2fb833b230 --- /dev/null +++ b/third_party/nixpkgs/doc/functions/nix-gitignore.section.md @@ -0,0 +1,49 @@ +# pkgs.nix-gitignore {#sec-pkgs-nix-gitignore} + +`pkgs.nix-gitignore` is a function that acts similarly to `builtins.filterSource` but also allows filtering with the help of the gitignore format. + +## Usage {#sec-pkgs-nix-gitignore-usage} + +`pkgs.nix-gitignore` exports a number of functions, but you\'ll most likely need either `gitignoreSource` or `gitignoreSourcePure`. As their first argument, they both accept either 1. a file with gitignore lines or 2. a string with gitignore lines, or 3. a list of either of the two. They will be concatenated into a single big string. + +```nix +{ pkgs ? import {} }: + + nix-gitignore.gitignoreSource [] ./source + # Simplest version + + nix-gitignore.gitignoreSource "supplemental-ignores\n" ./source + # This one reads the ./source/.gitignore and concats the auxiliary ignores + + nix-gitignore.gitignoreSourcePure "ignore-this\nignore-that\n" ./source + # Use this string as gitignore, don't read ./source/.gitignore. + + nix-gitignore.gitignoreSourcePure ["ignore-this\nignore-that\n", ~/.gitignore] ./source + # It also accepts a list (of strings and paths) that will be concatenated + # once the paths are turned to strings via readFile. +``` + +These functions are derived from the `Filter` functions by setting the first filter argument to `(_: _: true)`: + +```nix +gitignoreSourcePure = gitignoreFilterSourcePure (_: _: true); +gitignoreSource = gitignoreFilterSource (_: _: true); +``` + +Those filter functions accept the same arguments the `builtins.filterSource` function would pass to its filters, thus `fn: gitignoreFilterSourcePure fn ""` should be extensionally equivalent to `filterSource`. The file is blacklisted if it\'s blacklisted by either your filter or the gitignoreFilter. + +If you want to make your own filter from scratch, you may use + +```nix +gitignoreFilter = ign: root: filterPattern (gitignoreToPatterns ign) root; +``` + +## gitignore files in subdirectories {#sec-pkgs-nix-gitignore-usage-recursive} + +If you wish to use a filter that would search for .gitignore files in subdirectories, just like git does by default, use this function: + +```nix +gitignoreFilterRecursiveSource = filter: patterns: root: +# OR +gitignoreRecursiveSource = gitignoreFilterSourcePure (_: _: true); +``` diff --git a/third_party/nixpkgs/doc/functions/nix-gitignore.xml b/third_party/nixpkgs/doc/functions/nix-gitignore.xml deleted file mode 100644 index 37a82b196c..0000000000 --- a/third_party/nixpkgs/doc/functions/nix-gitignore.xml +++ /dev/null @@ -1,70 +0,0 @@ -
- pkgs.nix-gitignore - - - pkgs.nix-gitignore is a function that acts similarly to builtins.filterSource but also allows filtering with the help of the gitignore format. - - -
- Usage - - - pkgs.nix-gitignore exports a number of functions, but you'll most likely need either gitignoreSource or gitignoreSourcePure. As their first argument, they both accept either 1. a file with gitignore lines or 2. a string with gitignore lines, or 3. a list of either of the two. They will be concatenated into a single big string. - - - {} }: - - nix-gitignore.gitignoreSource [] ./source - # Simplest version - - nix-gitignore.gitignoreSource "supplemental-ignores\n" ./source - # This one reads the ./source/.gitignore and concats the auxiliary ignores - - nix-gitignore.gitignoreSourcePure "ignore-this\nignore-that\n" ./source - # Use this string as gitignore, don't read ./source/.gitignore. - - nix-gitignore.gitignoreSourcePure ["ignore-this\nignore-that\n", ~/.gitignore] ./source - # It also accepts a list (of strings and paths) that will be concatenated - # once the paths are turned to strings via readFile. - ]]> - - - These functions are derived from the Filter functions by setting the first filter argument to (_: _: true): - - - - - - Those filter functions accept the same arguments the builtins.filterSource function would pass to its filters, thus fn: gitignoreFilterSourcePure fn "" should be extensionally equivalent to filterSource. The file is blacklisted iff it's blacklisted by either your filter or the gitignoreFilter. - - - - If you want to make your own filter from scratch, you may use - - - -
- -
- gitignore files in subdirectories - - - If you wish to use a filter that would search for .gitignore files in subdirectories, just like git does by default, use this function: - - - -
-
diff --git a/third_party/nixpkgs/doc/functions/prefer-remote-fetch.section.md b/third_party/nixpkgs/doc/functions/prefer-remote-fetch.section.md new file mode 100644 index 0000000000..8760c10022 --- /dev/null +++ b/third_party/nixpkgs/doc/functions/prefer-remote-fetch.section.md @@ -0,0 +1,17 @@ +# prefer-remote-fetch overlay {#sec-prefer-remote-fetch} + +`prefer-remote-fetch` is an overlay that download sources on remote builder. This is useful when the evaluating machine has a slow upload while the builder can fetch faster directly from the source. To use it, put the following snippet as a new overlay: + +```nix +self: super: + (super.prefer-remote-fetch self super) +``` + +A full configuration example for that sets the overlay up for your own account, could look like this + +```ShellSession +$ mkdir ~/.config/nixpkgs/overlays/ +$ cat > ~/.config/nixpkgs/overlays/prefer-remote-fetch.nix < - prefer-remote-fetch overlay - - - prefer-remote-fetch is an overlay that download sources on remote builder. This is useful when the evaluating machine has a slow upload while the builder can fetch faster directly from the source. To use it, put the following snippet as a new overlay: - -self: super: - (super.prefer-remote-fetch self super) - - A full configuration example for that sets the overlay up for your own account, could look like this - -$ mkdir ~/.config/nixpkgs/overlays/ -$ cat > ~/.config/nixpkgs/overlays/prefer-remote-fetch.nix <<EOF - self: super: super.prefer-remote-fetch self super -EOF - - - diff --git a/third_party/nixpkgs/doc/labelless-link-is-xref.lua b/third_party/nixpkgs/doc/labelless-link-is-xref.lua new file mode 100644 index 0000000000..67569b0209 --- /dev/null +++ b/third_party/nixpkgs/doc/labelless-link-is-xref.lua @@ -0,0 +1,24 @@ +local function starts_with(start, str) + return str:sub(1, #start) == start +end + +local function escape_xml_arg(arg) + amps = arg:gsub('&', '&') + amps_quotes = amps:gsub('"', '"') + amps_quotes_lt = amps_quotes:gsub('<', '<') + + return amps_quotes_lt +end + +function Link(elem) + has_no_content = #elem.content == 0 + targets_anchor = starts_with('#', elem.target) + has_no_attributes = elem.title == '' and elem.identifier == '' and #elem.classes == 0 and #elem.attributes == 0 + + if has_no_content and targets_anchor and has_no_attributes then + -- xref expects idref without the pound-sign + target_without_hash = elem.target:sub(2, #elem.target) + + return pandoc.RawInline('docbook', '') + end +end diff --git a/third_party/nixpkgs/doc/languages-frameworks/agda.section.md b/third_party/nixpkgs/doc/languages-frameworks/agda.section.md index 1675fcb0a7..2b7c35f68d 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/agda.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/agda.section.md @@ -1,6 +1,6 @@ # Agda {#agda} -## How to use Agda +## How to use Agda {#how-to-use-agda} Agda is available as the [agda](https://search.nixos.org/packages?channel=unstable&show=agda&from=0&size=30&sort=relevance&query=agda) package. @@ -43,6 +43,7 @@ agda.withPackages (p: [ ``` You can also reference a GitHub repository + ```nix agda.withPackages (p: [ (p.standard-library.overrideAttrs (oldAttrs: { @@ -59,6 +60,7 @@ agda.withPackages (p: [ If you want to use a library not added to Nixpkgs, you can add a dependency to a local library by calling `agdaPackages.mkDerivation`. + ```nix agda.withPackages (p: [ (p.mkDerivation { @@ -92,20 +94,21 @@ See [Building Agda Packages](#building-agda-packages) for more information on `m Agda will not by default use these libraries. To tell Agda to use a library we have some options: * Call `agda` with the library flag: -```ShellSession -$ agda -l standard-library -i . MyFile.agda -``` + ```ShellSession + $ agda -l standard-library -i . MyFile.agda + ``` * Write a `my-library.agda-lib` file for the project you are working on which may look like: -``` -name: my-library -include: . -depend: standard-library -``` + ``` + name: my-library + include: . + depend: standard-library + ``` * Create the file `~/.agda/defaults` and add any libraries you want to use by default. More information can be found in the [official Agda documentation on library management](https://agda.readthedocs.io/en/v2.6.1/tools/package-system.html). -## Compiling Agda +## Compiling Agda {#compiling-agda} + Agda modules can be compiled using the GHC backend with the `--compile` flag. A version of `ghc` with `ieee754` is made available to the Agda program via the `--with-compiler` flag. This can be overridden by a different version of `ghc` as follows: @@ -116,7 +119,8 @@ agda.withPackages { } ``` -## Writing Agda packages +## Writing Agda packages {#writing-agda-packages} + To write a nix derivation for an Agda library, first check that the library has a `*.agda-lib` file. A derivation can then be written using `agdaPackages.mkDerivation`. This has similar arguments to `stdenv.mkDerivation` with the following additions: @@ -140,19 +144,21 @@ agdaPackages.mkDerivation { } ``` -### Building Agda packages +### Building Agda packages {#building-agda-packages} + The default build phase for `agdaPackages.mkDerivation` simply runs `agda` on the `Everything.agda` file. If something else is needed to build the package (e.g. `make`) then the `buildPhase` should be overridden. Additionally, a `preBuild` or `configurePhase` can be used if there are steps that need to be done prior to checking the `Everything.agda` file. `agda` and the Agda libraries contained in `buildInputs` are made available during the build phase. -### Installing Agda packages +### Installing Agda packages {#installing-agda-packages} + The default install phase copies Agda source files, Agda interface files (`*.agdai`) and `*.agda-lib` files to the output directory. This can be overridden. By default, Agda sources are files ending on `.agda`, or literate Agda files ending on `.lagda`, `.lagda.tex`, `.lagda.org`, `.lagda.md`, `.lagda.rst`. The list of recognised Agda source extensions can be extended by setting the `extraExtensions` config variable. -## Adding Agda packages to Nixpkgs +## Adding Agda packages to Nixpkgs {#adding-agda-packages-to-nixpkgs} To add an Agda package to `nixpkgs`, the derivation should be written to `pkgs/development/libraries/agda/${library-name}/` and an entry should be added to `pkgs/top-level/agda-packages.nix`. Here it is called in a scope with access to all other Agda libraries, so the top line of the `default.nix` can look like: @@ -182,6 +188,7 @@ mkDerivation { ''; } ``` + This library has a file called `.agda-lib`, and so we give an empty string to `libraryFile` as nothing precedes `.agda-lib` in the filename. This file contains `name: IAL-1.3`, and so we let `libraryName = "IAL-1.3"`. This library does not use an `Everything.agda` file and instead has a Makefile, so there is no need to set `everythingFile` and we set a custom `buildPhase`. When writing an Agda package it is essential to make sure that no `.agda-lib` file gets added to the store as a single file (for example by using `writeText`). This causes Agda to think that the nix store is a Agda library and it will attempt to write to it whenever it typechecks something. See [https://github.com/agda/agda/issues/4613](https://github.com/agda/agda/issues/4613). diff --git a/third_party/nixpkgs/doc/languages-frameworks/android.section.md b/third_party/nixpkgs/doc/languages-frameworks/android.section.md index e7dbbf6f8e..28128ead66 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/android.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/android.section.md @@ -3,8 +3,8 @@ The Android build environment provides three major features and a number of supporting features. -Deploying an Android SDK installation with plugins --------------------------------------------------- +## Deploying an Android SDK installation with plugins {#deploying-an-android-sdk-installation-with-plugins} + The first use case is deploying the SDK with a desired set of plugins or subsets of an SDK. @@ -136,8 +136,8 @@ in androidComposition.platform-tools ``` -Using predefined Android package compositions ---------------------------------------------- +## Using predefined Android package compositions {#using-predefined-android-package-compositions} + In addition to composing an Android package set manually, it is also possible to use a predefined composition that contains all basic packages for a specific Android version, such as version 9.0 (API-level 28). @@ -159,12 +159,13 @@ with import {}; androidenv.androidPkgs_9_0.platform-tools ``` -Building an Android application -------------------------------- +## Building an Android application {#building-an-android-application} + In addition to the SDK, it is also possible to build an Ant-based Android project and automatically deploy all the Android plugins that a project requires. + ```nix with import {}; @@ -199,8 +200,8 @@ to build Android apps. An Android APK gets exposed as a build product and can be installed on any Android device with a web browser by navigating to the build result page. -Spawning emulator instances ---------------------------- +## Spawning emulator instances {#spawning-emulator-instances} + For testing purposes, it can also be quite convenient to automatically generate scripts that spawn emulator instances with all desired configuration settings. @@ -241,8 +242,8 @@ androidenv.emulateApp { In addition to prebuilt APKs, you can also bind the APK parameter to a `buildApp {}` function invocation shown in the previous example. -Notes on environment variables in Android projects --------------------------------------------------- +## Notes on environment variables in Android projects {#notes-on-environment-variables-in-android-projects} + * `ANDROID_SDK_ROOT` should point to the Android SDK. In your Nix expressions, this should be `${androidComposition.androidsdk}/libexec/android-sdk`. Note that `ANDROID_HOME` is deprecated, but if you rely on tools that need it, you can export it too. @@ -300,8 +301,8 @@ This shell.nix includes a shell hook that overwrites local.properties with the c sdk.dir and ndk.dir values. This will ensure that the SDK and NDK directories will both be correct when you run Android Studio inside nix-shell. -Notes on improving build.gradle compatibility ---------------------------------------------- +## Notes on improving build.gradle compatibility {#notes-on-improving-build.gradle-compatibility} + Ensure that your buildToolsVersion and ndkVersion match what is declared in androidenv. If you are using cmake, make sure its declared version is correct too. @@ -321,8 +322,8 @@ android { ``` -Querying the available versions of each plugin ----------------------------------------------- +## Querying the available versions of each plugin {#querying-the-available-versions-of-each-plugin} + repo.json provides all the options in one file now. A shell script in the `pkgs/development/mobile/androidenv/` subdirectory can be used to retrieve all @@ -334,8 +335,8 @@ possible options: The above command-line instruction queries all package versions in repo.json. -Updating the generated expressions ----------------------------------- +## Updating the generated expressions {#updating-the-generated-expressions} + repo.json is generated from XML files that the Android Studio package manager uses. To update the expressions run the `generate.sh` script that is stored in the `pkgs/development/mobile/androidenv/` subdirectory: diff --git a/third_party/nixpkgs/doc/languages-frameworks/beam.section.md b/third_party/nixpkgs/doc/languages-frameworks/beam.section.md index 68e84d2f99..348f66d427 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/beam.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/beam.section.md @@ -4,9 +4,9 @@ In this document and related Nix expressions, we use the term, _BEAM_, to describe the environment. BEAM is the name of the Erlang Virtual Machine and, as far as we're concerned, from a packaging perspective, all languages that run on the BEAM are interchangeable. That which varies, like the build system, is transparent to users of any given BEAM package, so we make no distinction. -## Available versions and deprecations schedule +## Available versions and deprecations schedule {#available-versions-and-deprecations-schedule} -### Elixir +### Elixir {#elixir} nixpkgs follows the [official elixir deprecation schedule](https://hexdocs.pm/elixir/compatibility-and-deprecations.html) and keeps the last 5 released versions of Elixir available. @@ -68,7 +68,7 @@ Erlang.mk functions similarly to Rebar3, except we use `buildErlangMk` instead o `mixRelease` is used to make a release in the mix sense. Dependencies will need to be fetched with `fetchMixDeps` and passed to it. -#### mixRelease - Elixir Phoenix example +#### mixRelease - Elixir Phoenix example {#mixrelease---elixir-phoenix-example} Here is how your `default.nix` file would look. @@ -148,7 +148,7 @@ Setup will require the following steps: - you can now `nix-build .` - To run the release, set the `RELEASE_TMP` environment variable to a directory that your program has write access to. It will be used to store the BEAM settings. -#### Example of creating a service for an Elixir - Phoenix project +#### Example of creating a service for an Elixir - Phoenix project {#example-of-creating-a-service-for-an-elixir---phoenix-project} In order to create a service with your release, you could add a `service.nix` in your project with the following @@ -228,7 +228,7 @@ mkShell { } ``` -#### Elixir - Phoenix project +#### Elixir - Phoenix project {#elixir---phoenix-project} Here is an example `shell.nix`. diff --git a/third_party/nixpkgs/doc/languages-frameworks/bower.section.md b/third_party/nixpkgs/doc/languages-frameworks/bower.section.md index f408bd5b2c..6226dc0702 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/bower.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/bower.section.md @@ -149,7 +149,7 @@ A few notes about [Full example — `default.nix`](#ex-buildBowerComponentsDefau ## Troubleshooting {#ssec-bower2nix-troubleshooting} -### ENOCACHE errors from buildBowerComponents +### ENOCACHE errors from buildBowerComponents {#enocache-errors-from-buildbowercomponents} This means that Bower was looking for a package version which doesn't exist in the generated `bower-packages.nix`. diff --git a/third_party/nixpkgs/doc/languages-frameworks/coq.section.md b/third_party/nixpkgs/doc/languages-frameworks/coq.section.md index 5964d46e2f..0674c5a470 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/coq.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/coq.section.md @@ -1,6 +1,6 @@ # Coq and coq packages {#sec-language-coq} -## Coq derivation: `coq` +## Coq derivation: `coq` {#coq-derivation-coq} The Coq derivation is overridable through the `coq.override overrides`, where overrides is an attribute set which contains the arguments to override. We recommend overriding either of the following @@ -8,7 +8,7 @@ The Coq derivation is overridable through the `coq.override overrides`, where ov * `customOCamlPackage` (optional, defaults to `null`, which lets Coq choose a version automatically), which can be set to any of the ocaml packages attribute of `ocaml-ng` (such as `ocaml-ng.ocamlPackages_4_10` which is the default for Coq 8.11 for example). * `coq-version` (optional, defaults to the short version e.g. "8.10"), is a version number of the form "x.y" that indicates which Coq's version build behavior to mimic when using a source which is not a release. E.g. `coq.override { version = "d370a9d1328a4e1cdb9d02ee032f605a9d94ec7a"; coq-version = "8.10"; }`. -## Coq packages attribute sets: `coqPackages` +## Coq packages attribute sets: `coqPackages` {#coq-packages-attribute-sets-coqpackages} The recommended way of defining a derivation for a Coq library, is to use the `coqPackages.mkCoqDerivation` function, which is essentially a specialization of `mkDerivation` taking into account most of the specifics of Coq libraries. The following attributes are supported: diff --git a/third_party/nixpkgs/doc/languages-frameworks/crystal.section.md b/third_party/nixpkgs/doc/languages-frameworks/crystal.section.md index 7479013297..cbe31f9f0b 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/crystal.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/crystal.section.md @@ -1,10 +1,11 @@ # Crystal {#crystal} -## Building a Crystal package +## Building a Crystal package {#building-a-crystal-package} This section uses [Mint](https://github.com/mint-lang/mint) as an example for how to build a Crystal package. If the Crystal project has any dependencies, the first step is to get a `shards.nix` file encoding those. Get a copy of the project and go to its root directory such that its `shard.lock` file is in the current directory, then run `crystal2nix` in it + ```bash $ git clone https://github.com/mint-lang/mint $ cd mint @@ -15,6 +16,7 @@ $ nix-shell -p crystal2nix --run crystal2nix This should have generated a `shards.nix` file. Next create a Nix file for your derivation and use `pkgs.crystal.buildCrystalPackage` as follows: + ```nix with import {}; crystal.buildCrystalPackage rec { diff --git a/third_party/nixpkgs/doc/languages-frameworks/dotnet.section.md b/third_party/nixpkgs/doc/languages-frameworks/dotnet.section.md index 725ffd4bec..1bcb6e4521 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/dotnet.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/dotnet.section.md @@ -1,6 +1,6 @@ -# Dotnet +# Dotnet {#dotnet} -## Local Development Workflow +## Local Development Workflow {#local-development-workflow} For local development, it's recommended to use nix-shell to create a dotnet environment: @@ -16,7 +16,7 @@ mkShell { } ``` -### Using many sdks in a workflow +### Using many sdks in a workflow {#using-many-sdks-in-a-workflow} It's very likely that more than one sdk will be needed on a given project. Dotnet provides several different frameworks (E.g dotnetcore, aspnetcore, etc.) as well as many versions for a given framework. Normally, dotnet is able to fetch a framework and install it relative to the executable. However, this would mean writing to the nix store in nixpkgs, which is read-only. To support the many-sdk use case, one can compose an environment using `dotnetCorePackages.combinePackages`: @@ -37,7 +37,7 @@ mkShell { This will produce a dotnet installation that has the dotnet 3.1, 3.0, and 2.1 sdk. The first sdk listed will have it's cli utility present in the resulting environment. Example info output: -```ShellSesssion +```ShellSession $ dotnet --info .NET Core SDK (reflecting any global.json): Version: 3.1.101 @@ -60,15 +60,15 @@ $ dotnet --info Microsoft.NETCore.App 3.1.1 [/nix/store/iiv98i2jdi226dgh4jzkkj2ww7f8jgpd-dotnet-core-combined/shared/Microsoft.NETCore.App] ``` -## dotnet-sdk vs dotnetCorePackages.sdk +## dotnet-sdk vs dotnetCorePackages.sdk {#dotnet-sdk-vs-dotnetcorepackages.sdk} The `dotnetCorePackages.sdk_X_Y` is preferred over the old dotnet-sdk as both major and minor version are very important for a dotnet environment. If a given minor version isn't present (or was changed), then this will likely break your ability to build a project. -## dotnetCorePackages.sdk vs dotnetCorePackages.net vs dotnetCorePackages.netcore vs dotnetCorePackages.aspnetcore +## dotnetCorePackages.sdk vs dotnetCorePackages.net vs dotnetCorePackages.netcore vs dotnetCorePackages.aspnetcore {#dotnetcorepackages.sdk-vs-dotnetcorepackages.net-vs-dotnetcorepackages.netcore-vs-dotnetcorepackages.aspnetcore} The `dotnetCorePackages.sdk` contains both a runtime and the full sdk of a given version. The `net`, `netcore` and `aspnetcore` packages are meant to serve as minimal runtimes to deploy alongside already built applications. For runtime versions >= .NET 5 `net` is used while `netcore` is used for older .NET Core runtime version. -## Packaging a Dotnet Application +## Packaging a Dotnet Application {#packaging-a-dotnet-application} Ideally, we would like to build against the sdk, then only have the dotnet runtime available in the runtime closure. diff --git a/third_party/nixpkgs/doc/languages-frameworks/emscripten.section.md b/third_party/nixpkgs/doc/languages-frameworks/emscripten.section.md index d391e03807..b3ddf0ceda 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/emscripten.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/emscripten.section.md @@ -27,16 +27,14 @@ Modes of use of `emscripten`: * dev-shell for zlib implementation hacking: * `nix-shell -A emscriptenPackages.zlib` - -## Imperative usage +## Imperative usage {#imperative-usage} A few things to note: * `export EMCC_DEBUG=2` is nice for debugging * `~/.emscripten`, the build artifact cache sometimes creates issues and needs to be removed from time to time - -## Declarative usage +## Declarative usage {#declarative-usage} Let's see two different examples from `pkgs/top-level/emscripten-packages.nix`: @@ -50,7 +48,7 @@ A special requirement of the `pkgs.buildEmscriptenPackage` is the `doCheck = tru * Use `export EMCC_DEBUG=2` from within a emscriptenPackage's `phase` to get more detailed debug output what is going wrong. * ~/.emscripten cache is requiring us to set `HOME=$TMPDIR` in individual phases. This makes compilation slower but also makes it more deterministic. -### Usage 1: pkgs.zlib.override +### Usage 1: pkgs.zlib.override {#usage-1-pkgs.zlib.override} This example uses `zlib` from nixpkgs but instead of compiling **C** to **ELF** it compiles **C** to **JS** since we were using `pkgs.zlib.override` and changed stdenv to `pkgs.emscriptenStdenv`. A few adaptions and hacks were set in place to make it working. One advantage is that when `pkgs.zlib` is updated, it will automatically update this package as well. However, this can also be the downside... @@ -110,7 +108,7 @@ See the `zlib` example: ''; }); -### Usage 2: pkgs.buildEmscriptenPackage +### Usage 2: pkgs.buildEmscriptenPackage {#usage-2-pkgs.buildemscriptenpackage} This `xmlmirror` example features a emscriptenPackage which is defined completely from this context and no `pkgs.zlib.override` is used. @@ -165,7 +163,7 @@ This `xmlmirror` example features a emscriptenPackage which is defined completel ''; }; -### Declarative debugging +### Declarative debugging {#declarative-debugging} Use `nix-shell -I nixpkgs=/some/dir/nixpkgs -A emscriptenPackages.libz` and from there you can go trough the individual steps. This makes it easy to build a good `unit test` or list the files of the project. @@ -177,7 +175,7 @@ Use `nix-shell -I nixpkgs=/some/dir/nixpkgs -A emscriptenPackages.libz` and from 6. `buildPhase` 7. ... happy hacking... -## Summary +## Summary {#summary} Using this toolchain makes it easy to leverage `nix` from NixOS, MacOSX or even Windows (WSL+ubuntu+nix). This toolchain is reproducible, behaves like the rest of the packages from nixpkgs and contains a set of well working examples to learn and adapt from. diff --git a/third_party/nixpkgs/doc/languages-frameworks/gnome.section.md b/third_party/nixpkgs/doc/languages-frameworks/gnome.section.md index 732b529cc2..11b49f4f23 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/gnome.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/gnome.section.md @@ -8,12 +8,30 @@ Programs in the GNOME universe are written in various languages but they all use [GSettings](https://developer.gnome.org/gio/stable/GSettings.html) API is often used for storing settings. GSettings schemas are required, to know the type and other metadata of the stored values. GLib looks for `glib-2.0/schemas/gschemas.compiled` files inside the directories of `XDG_DATA_DIRS`. -On Linux, GSettings API is implemented using [dconf](https://wiki.gnome.org/Projects/dconf) backend. You will need to add `dconf` GIO module to `GIO_EXTRA_MODULES` variable, otherwise the `memory` backend will be used and the saved settings will not be persistent. +On Linux, GSettings API is implemented using [dconf](https://wiki.gnome.org/Projects/dconf) backend. You will need to add `dconf` [GIO module](#ssec-gnome-gio-modules) to `GIO_EXTRA_MODULES` variable, otherwise the `memory` backend will be used and the saved settings will not be persistent. Last you will need the dconf database D-Bus service itself. You can enable it using `programs.dconf.enable`. Some applications will also require `gsettings-desktop-schemas` for things like reading proxy configuration or user interface customization. This dependency is often not mentioned by upstream, you should grep for `org.gnome.desktop` and `org.gnome.system` to see if the schemas are needed. +### GIO modules {#ssec-gnome-gio-modules} + +GLib’s [GIO](https://developer.gnome.org/gio/stable/ch01.html) library supports several [extension points](https://developer.gnome.org/gio/stable/extending-gio.html). Notably, they allow: + +* implementing settings backends (already [mentioned](#ssec-gnome-settings)) +* adding TLS support +* proxy settings +* virtual file systems + +The modules are typically installed to `lib/gio/modules/` directory of a package and you need to add them to `GIO_EXTRA_MODULES` if you need any of those features. + +In particular, we recommend: + +* adding `dconf.lib` for any software on Linux that reads [GSettings](#ssec-gnome-settings) (even transitivily through e.g. GTK’s file manager) +* adding `glib-networking` for any software that accesses network using GIO or libsoup – glib-networking contains a module that implements TLS support and loads system-wide proxy settings + +To allow software to use various virtual file systems, `gvfs` package can be also added. But that is usually an optional feature so we typically use `gvfs` from the system (e.g. installed globally using NixOS module). + ### GdkPixbuf loaders {#ssec-gnome-gdk-pixbuf-loaders} GTK applications typically use [GdkPixbuf](https://developer.gnome.org/gdk-pixbuf/stable/) to load images. But `gdk-pixbuf` package only supports basic bitmap formats like JPEG, PNG or TIFF, requiring to use third-party loader modules for other formats. This is especially painful since GTK itself includes SVG icons, which cannot be rendered without a loader provided by `librsvg`. @@ -84,7 +102,7 @@ For convenience, it also adds `dconf.lib` for a GIO module implementing a GSetti - []{#ssec-gnome-hooks-gobject-introspection} `gobject-introspection` setup hook populates `GI_TYPELIB_PATH` variable with `lib/girepository-1.0` directories of dependencies, which is then added to wrapper by `wrapGAppsHook`. It also adds `share` directories of dependencies to `XDG_DATA_DIRS`, which is intended to promote GIR files but it also [pollutes the closures](https://github.com/NixOS/nixpkgs/issues/32790) of packages using `wrapGAppsHook`. - ::: warning + ::: {.warning} The setup hook [currently](https://github.com/NixOS/nixpkgs/issues/56943) does not work in expressions with `strictDeps` enabled, like Python packages. In those cases, you will need to disable it with `strictDeps = false;`. ::: diff --git a/third_party/nixpkgs/doc/languages-frameworks/go.section.md b/third_party/nixpkgs/doc/languages-frameworks/go.section.md index f52570ac8c..b20a8d0c35 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/go.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/go.section.md @@ -44,7 +44,7 @@ pet = buildGoModule rec { The function `buildGoPackage` builds legacy Go programs, not supporting Go modules. -### Example for `buildGoPackage` +### Example for `buildGoPackage` {#example-for-buildgopackage} In the following is an example expression using buildGoPackage, the following arguments are of special significance to the function: @@ -140,4 +140,4 @@ Removes the pre-existing vendor directory. This should only be used if the depen ### `subPackages` {#var-go-subPackages} -Limits the builder from building child packages that have not been listed. If subPackages is not specified, all child packages will be built. +Limits the builder from building child packages that have not been listed. If `subPackages` is not specified, all child packages will be built. diff --git a/third_party/nixpkgs/doc/languages-frameworks/idris.section.md b/third_party/nixpkgs/doc/languages-frameworks/idris.section.md index 000e3627d7..ffdd706eb0 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/idris.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/idris.section.md @@ -1,10 +1,10 @@ # Idris {#idris} -## Installing Idris +## Installing Idris {#installing-idris} The easiest way to get a working idris version is to install the `idris` attribute: -```ShellSesssion +```ShellSession $ # On NixOS $ nix-env -i nixos.idris $ # On non-NixOS @@ -21,7 +21,7 @@ self: super: { And then: -```ShellSesssion +```ShellSession $ # On NixOS $ nix-env -iA nixos.myIdris $ # On non-NixOS @@ -29,7 +29,8 @@ $ nix-env -iA nixpkgs.myIdris ``` To see all available Idris packages: -```ShellSesssion + +```ShellSession $ # On NixOS $ nix-env -qaPA nixos.idrisPackages $ # On non-NixOS @@ -37,22 +38,23 @@ $ nix-env -qaPA nixpkgs.idrisPackages ``` Similarly, entering a `nix-shell`: -```ShellSesssion + +```ShellSession $ nix-shell -p 'idrisPackages.with-packages (with idrisPackages; [ contrib pruviloj ])' ``` -## Starting Idris with library support +## Starting Idris with library support {#starting-idris-with-library-support} To have access to these libraries in idris, call it with an argument `-p ` for each library: -```ShellSesssion +```ShellSession $ nix-shell -p 'idrisPackages.with-packages (with idrisPackages; [ contrib pruviloj ])' [nix-shell:~]$ idris -p contrib -p pruviloj ``` A listing of all available packages the Idris binary has access to is available via `--listlibs`: -```ShellSesssion +```ShellSession $ idris --listlibs 00prelude-idx.ibc pruviloj @@ -64,7 +66,7 @@ prelude 00contrib-idx.ibc ``` -## Building an Idris project with Nix +## Building an Idris project with Nix {#building-an-idris-project-with-nix} As an example of how a Nix expression for an Idris package can be created, here is the one for `idrisPackages.yaml`: @@ -105,7 +107,7 @@ build-idris-package { Assuming this file is saved as `yaml.nix`, it's buildable using -```ShellSesssion +```ShellSession $ nix-build -E '(import {}).idrisPackages.callPackage ./yaml.nix {}' ``` @@ -121,11 +123,11 @@ with import {}; in another file (say `default.nix`) to be able to build it with -```ShellSesssion +```ShellSession $ nix-build -A yaml ``` -## Passing options to `idris` commands +## Passing options to `idris` commands {#passing-options-to-idris-commands} The `build-idris-package` function provides also optional input values to set additional options for the used `idris` commands. diff --git a/third_party/nixpkgs/doc/languages-frameworks/ios.section.md b/third_party/nixpkgs/doc/languages-frameworks/ios.section.md index a162e8d19f..04b013be12 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/ios.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/ios.section.md @@ -20,8 +20,8 @@ Hydra. The Xcode build environment implements a number of features. -Deploying a proxy component wrapper exposing Xcode --------------------------------------------------- +## Deploying a proxy component wrapper exposing Xcode {#deploying-a-proxy-component-wrapper-exposing-xcode} + The first use case is deploying a Nix package that provides symlinks to the Xcode installation on the host system. This package can be used as a build input to any build function implemented in the Nix expression language that requires @@ -55,8 +55,8 @@ lrwxr-xr-x 1 sander staff 61 1 jan 1970 xcodebuild -> /Applications/Xcode.a lrwxr-xr-x 1 sander staff 14 1 jan 1970 xcrun -> /usr/bin/xcrun ``` -Building an iOS application ---------------------------- +## Building an iOS application {#building-an-ios-application} + We can build an iOS app executable for the simulator, or an IPA/xcarchive file for release purposes, e.g. ad-hoc, enterprise or store installations, by executing the `xcodeenv.buildApp {}` function: @@ -99,6 +99,7 @@ xcodeenv.buildApp { ``` The above function takes a variety of parameters: + * The `name` and `src` parameters are mandatory and specify the name of the app and the location where the source code resides * `sdkVersion` specifies which version of the iOS SDK to use. @@ -151,8 +152,8 @@ the `xcodeenv.composeXcodeWrapper {}` function takes. For example, the `xcodeBaseDir` parameter can be overridden to refer to a different Xcode version. -Spawning simulator instances ----------------------------- +## Spawning simulator instances {#spawning-simulator-instances} + In addition to building iOS apps, we can also automatically spawn simulator instances: @@ -213,8 +214,8 @@ xcode.simulateApp { By providing the result of an `xcode.buildApp {}` function and configuring the app bundle id, the app gets deployed automatically and started. -Troubleshooting ---------------- +## Troubleshooting {#troubleshooting} + In some rare cases, it may happen that after a failure, changes are not picked up. Most likely, this is caused by a derived data cache that Xcode maintains. To wipe it you can run: diff --git a/third_party/nixpkgs/doc/languages-frameworks/lua.section.md b/third_party/nixpkgs/doc/languages-frameworks/lua.section.md index 5935cbd7bd..ea893ce3a4 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/lua.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/lua.section.md @@ -1,8 +1,8 @@ -# User's Guide to Lua Infrastructure {#users-guide-to-lua-infrastructure} +# User’s Guide to Lua Infrastructure {#users-guide-to-lua-infrastructure} -## Using Lua +## Using Lua {#using-lua} -### Overview of Lua +### Overview of Lua {#overview-of-lua} Several versions of the Lua interpreter are available: luajit, lua 5.1, 5.2, 5.3. The attribute `lua` refers to the default interpreter, it is also possible to refer to specific versions, e.g. `lua5_2` refers to Lua 5.2. @@ -17,27 +17,31 @@ The main package set contains aliases to these package sets, e.g. `luaPackages` refers to `lua5_1.pkgs` and `lua52Packages` to `lua5_2.pkgs`. -### Installing Lua and packages +### Installing Lua and packages {#installing-lua-and-packages} -#### Lua environment defined in separate `.nix` file +#### Lua environment defined in separate `.nix` file {#lua-environment-defined-in-separate-.nix-file} Create a file, e.g. `build.nix`, with the following expression + ```nix with import {}; lua5_2.withPackages (ps: with ps; [ busted luafilesystem ]) ``` + and install it in your profile with + ```shell nix-env -if build.nix ``` Now you can use the Lua interpreter, as well as the extra packages (`busted`, `luafilesystem`) that you added to the environment. -#### Lua environment defined in `~/.config/nixpkgs/config.nix` +#### Lua environment defined in `~/.config/nixpkgs/config.nix` {#lua-environment-defined-in-.confignixpkgsconfig.nix} If you prefer to, you could also add the environment as a package override to the Nixpkgs set, e.g. using `config.nix`, + ```nix { # ... @@ -46,14 +50,16 @@ using `config.nix`, }; } ``` + and install it in your profile with + ```shell nix-env -iA nixpkgs.myLuaEnv ``` The environment is installed by referring to the attribute, and considering the `nixpkgs` channel was used. -#### Lua environment defined in `/etc/nixos/configuration.nix` +#### Lua environment defined in `/etc/nixos/configuration.nix` {#lua-environment-defined-in-etcnixosconfiguration.nix} For the sake of completeness, here's another example how to install the environment system-wide. @@ -66,7 +72,7 @@ For the sake of completeness, here's another example how to install the environm } ``` -### How to override a Lua package using overlays? +### How to override a Lua package using overlays? {#how-to-override-a-lua-package-using-overlays} Use the following overlay template: @@ -87,18 +93,22 @@ final: prev: } ``` -### Temporary Lua environment with `nix-shell` +### Temporary Lua environment with `nix-shell` {#temporary-lua-environment-with-nix-shell} There are two methods for loading a shell with Lua packages. The first and recommended method is to create an environment with `lua.buildEnv` or `lua.withPackages` and load that. E.g. + ```sh $ nix-shell -p 'lua.withPackages(ps: with ps; [ busted luafilesystem ])' ``` + opens a shell from which you can launch the interpreter + ```sh [nix-shell:~] lua ``` + The other method, which is not recommended, does not create an environment and requires you to list the packages directly, ```sh @@ -108,7 +118,7 @@ Again, it is possible to launch the interpreter from the shell. The Lua interpreter has the attribute `pkgs` which contains all Lua libraries for that specific interpreter. -## Developing with Lua +## Developing with Lua {#developing-with-lua} Now that you know how to get a working Lua environment with Nix, it is time to go forward and start actually developing with Lua. There are two ways to @@ -116,7 +126,7 @@ package lua software, either it is on luarocks and most of it can be taken care of by the luarocks2nix converter or the packaging has to be done manually. Let's present the luarocks way first and the manual one in a second time. -### Packaging a library on luarocks +### Packaging a library on luarocks {#packaging-a-library-on-luarocks} [Luarocks.org](www.luarocks.org) is the main repository of lua packages. The site proposes two types of packages, the rockspec and the src.rock @@ -135,10 +145,11 @@ You can try converting luarocks packages to nix packages with the command `nix-s Nix rely on luarocks to install lua packages, basically it runs: `luarocks make --deps-mode=none --tree $out` -#### Packaging a library manually +#### Packaging a library manually {#packaging-a-library-manually} You can develop your package as you usually would, just don't forget to wrap it within a `toLuaModule` call, for instance + ```nix mynewlib = toLuaModule ( stdenv.mkDerivation { ... }); ``` @@ -146,16 +157,15 @@ mynewlib = toLuaModule ( stdenv.mkDerivation { ... }); There is also the `buildLuaPackage` function that can be used when lua modules are not packaged for luarocks. You can see a few examples at `pkgs/top-level/lua-packages.nix`. -## Lua Reference +## Lua Reference {#lua-reference} -### Lua interpreters +### Lua interpreters {#lua-interpreters} Versions 5.1, 5.2 and 5.3 of the lua interpreter are available as respectively `lua5_1`, `lua5_2` and `lua5_3`. Luajit is available too. The Nix expressions for the interpreters can be found in `pkgs/development/interpreters/lua-5`. - -#### Attributes on lua interpreters packages +#### Attributes on lua interpreters packages {#attributes-on-lua-interpreters-packages} Each interpreter has the following attributes: @@ -164,8 +174,7 @@ Each interpreter has the following attributes: - `withPackages`. Simpler interface to `buildEnv`. - `pkgs`. Set of Lua packages for that specific interpreter. The package set can be modified by overriding the interpreter and passing `packageOverrides`. - -#### `buildLuarocksPackage` function +#### `buildLuarocksPackage` function {#buildluarockspackage-function} The `buildLuarocksPackage` function is implemented in `pkgs/development/interpreters/lua-5/build-lua-package.nix` The following is an example: @@ -205,16 +214,17 @@ install the package By default `meta.platforms` is set to the same value as the interpreter unless overridden otherwise. -#### `buildLuaApplication` function +#### `buildLuaApplication` function {#buildluaapplication-function} The `buildLuaApplication` function is practically the same as `buildLuaPackage`. The difference is that `buildLuaPackage` by default prefixes the names of the packages with the version of the interpreter. Because with an application we're not interested in multiple version the prefix is dropped. -#### lua.withPackages function +#### lua.withPackages function {#lua.withpackages-function} The `lua.withPackages` takes a function as an argument that is passed the set of lua packages and returns the list of packages to be included in the environment. Using the `withPackages` function, the previous example for the luafilesystem environment can be written like this: + ```nix with import {}; @@ -223,6 +233,7 @@ lua.withPackages (ps: [ps.luafilesystem]) `withPackages` passes the correct package set for the specific interpreter version as an argument to the function. In the above example, `ps` equals `luaPackages`. But you can also easily switch to using `lua5_2`: + ```nix with import {}; @@ -231,13 +242,12 @@ lua5_2.withPackages (ps: [ps.lua]) Now, `ps` is set to `lua52Packages`, matching the version of the interpreter. - -### Possible Todos +### Possible Todos {#possible-todos} * export/use version specific variables such as `LUA_PATH_5_2`/`LUAROCKS_CONFIG_5_2` * let luarocks check for dependencies via exporting the different rocktrees in temporary config -### Lua Contributing guidelines +### Lua Contributing guidelines {#lua-contributing-guidelines} Following rules should be respected: diff --git a/third_party/nixpkgs/doc/languages-frameworks/maven.section.md b/third_party/nixpkgs/doc/languages-frameworks/maven.section.md index d66931e808..f53a6fa8ac 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/maven.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/maven.section.md @@ -43,9 +43,9 @@ public class Main { You find this demo project at https://github.com/fzakaria/nixos-maven-example -## Solving for dependencies +## Solving for dependencies {#solving-for-dependencies} -### buildMaven with NixOS/mvn2nix-maven-plugin +### buildMaven with NixOS/mvn2nix-maven-plugin {#buildmaven-with-nixosmvn2nix-maven-plugin} > ⚠️ Although `buildMaven` is the "blessed" way within nixpkgs, as of 2020, it hasn't seen much activity in quite a while. @@ -82,6 +82,7 @@ This file is then given to the `buildMaven` function, and it returns 2 attribute A simple derivation that runs through `mvn compile` & `mvn package` to build the JAR. You may use this as inspiration for more complicated derivations. Here is an [example](https://github.com/fzakaria/nixos-maven-example/blob/main/build-maven-repository.nix) of building the Maven repository + ```nix { pkgs ? import { } }: with pkgs; @@ -103,7 +104,8 @@ The benefit over the _double invocation_ as we will see below, is that the _/nix │   └── 4.1.3 │   ├── avalon-framework-4.1.3.jar -> /nix/store/iv5fp3955w3nq28ff9xfz86wvxbiw6n9-avalon-framework-4.1.3.jar ``` -### Double Invocation + +### Double Invocation {#double-invocation} > ⚠️ This pattern is the simplest but may cause unnecessary rebuilds due to the output hash changing. @@ -163,7 +165,7 @@ The build will fail, and tell you the expected `outputHash` to place. When you'v If your package uses _SNAPSHOT_ dependencies or _version ranges_; there is a strong likelihood that over-time your output hash will change since the resolved dependencies may change. Hence this method is less recommended then using `buildMaven`. -## Building a JAR +## Building a JAR {#building-a-jar} Regardless of which strategy is chosen above, the step to build the derivation is the same. @@ -201,7 +203,7 @@ in stdenv.mkDerivation rec { 2 directories, 1 file ``` -## Runnable JAR +## Runnable JAR {#runnable-jar} The previous example builds a `jar` file but that's not a file one can run. @@ -213,7 +215,7 @@ We will use the same repository we built above (either _double invocation_ or _b The following two methods are more suited to Nix then building an [UberJar](https://imagej.net/Uber-JAR) which may be the more traditional approach. -### CLASSPATH +### CLASSPATH {#classpath} > This is ideal if you are providing a derivation for _nixpkgs_ and don't want to patch the project's `pom.xml`. @@ -252,11 +254,12 @@ in stdenv.mkDerivation rec { } ``` -### MANIFEST file via Maven Plugin +### MANIFEST file via Maven Plugin {#manifest-file-via-maven-plugin} > This is ideal if you are the project owner and want to change your `pom.xml` to set the CLASSPATH within it. Augment the `pom.xml` to create a JAR with the following manifest: + ```xml diff --git a/third_party/nixpkgs/doc/languages-frameworks/ocaml.section.md b/third_party/nixpkgs/doc/languages-frameworks/ocaml.section.md index 9b92a80f47..5ffc23173d 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/ocaml.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/ocaml.section.md @@ -4,60 +4,83 @@ OCaml libraries should be installed in `$(out)/lib/ocaml/${ocaml.version}/site-l Given that most of the OCaml ecosystem is now built with dune, nixpkgs includes a convenience build support function called `buildDunePackage` that will build an OCaml package using dune, OCaml and findlib and any additional dependencies provided as `buildInputs` or `propagatedBuildInputs`. -Here is a simple package example. It defines an (optional) attribute `minimumOCamlVersion` that will be used to throw a descriptive evaluation error if building with an older OCaml is attempted. It uses the `fetchFromGitHub` fetcher to get its source. It sets the `doCheck` (optional) attribute to `true` which means that tests will be run with `dune runtest -p angstrom` after the build (`dune build -p angstrom`) is complete. It uses `alcotest` as a build input (because it is needed to run the tests) and `bigstringaf` and `result` as propagated build inputs (thus they will also be available to libraries depending on this library). The library will be installed using the `angstrom.install` file that dune generates. +Here is a simple package example. + +- It defines an (optional) attribute `minimalOCamlVersion` that will be used to + throw a descriptive evaluation error if building with an older OCaml is + attempted. + +- It uses the `fetchFromGitHub` fetcher to get its source. + +- `useDune2 = true` ensures that the latest version of Dune is used for the + build (this may become the default value in a future release). + +- It sets the optional `doCheck` attribute such that tests will be run with + `dune runtest -p angstrom` after the build (`dune build -p angstrom`) is + complete, but only if the Ocaml version is at at least `"4.05"`. + +- It uses the package `ocaml-syntax-shims` as a build input, `alcotest` and + `ppx_let` as check inputs (because they are needed to run the tests), and + `bigstringaf` and `result` as propagated build inputs (thus they will also be + available to libraries depending on this library). + +- The library will be installed using the `angstrom.install` file that dune + generates. ```nix -{ lib -, fetchFromGitHub -, buildDunePackage -, alcotest -, result -, bigstringaf -}: +{ lib, + fetchFromGitHub, + buildDunePackage, + ocaml, + ocaml-syntax-shims, + alcotest, + result, + bigstringaf, + ppx_let }: buildDunePackage rec { pname = "angstrom"; - version = "0.10.0"; + version = "0.15.0"; + useDune2 = true; - minimumOCamlVersion = "4.03"; + minimalOCamlVersion = "4.04"; src = fetchFromGitHub { owner = "inhabitedtype"; repo = pname; rev = version; - sha256 = "0lh6024yf9ds0nh9i93r9m6p5psi8nvrqxl5x7jwl13zb0r9xfpw"; + sha256 = "1hmrkdcdlkwy7rxhngf3cv3sa61cznnd9p5lmqhx20664gx2ibrh"; }; - buildInputs = [ alcotest ]; + checkInputs = [ alcotest ppx_let ]; + buildInputs = [ ocaml-syntax-shims ]; propagatedBuildInputs = [ bigstringaf result ]; - doCheck = true; + doCheck = lib.versionAtLeast ocaml.version "4.05"; - meta = with lib; { + meta = { homepage = "https://github.com/inhabitedtype/angstrom"; description = "OCaml parser combinators built for speed and memory efficiency"; - license = licenses.bsd3; - maintainers = with maintainers; [ sternenseemann ]; + license = lib.licenses.bsd3; + maintainers = with lib.maintainers; [ sternenseemann ]; }; -} ``` Here is a second example, this time using a source archive generated with `dune-release`. It is a good idea to use this archive when it is available as it will usually contain substituted variables such as a `%%VERSION%%` field. This library does not depend on any other OCaml library and no tests are run after building it. ```nix -{ lib -, fetchurl -, buildDunePackage -}: +{ lib, fetchurl, buildDunePackage }: buildDunePackage rec { pname = "wtf8"; - version = "1.0.1"; + version = "1.0.2"; - minimumOCamlVersion = "4.01"; + useDune2 = true; + + minimalOCamlVersion = "4.02"; src = fetchurl { - url = "https://github.com/flowtype/ocaml-${pname}/releases/download/v${version}/${pname}-${version}.tbz"; - sha256 = "1msg3vycd3k8qqj61sc23qks541cxpb97vrnrvrhjnqxsqnh6ygq"; + url = "https://github.com/flowtype/ocaml-${pname}/releases/download/v${version}/${pname}-v${version}.tbz"; + sha256 = "09ygcxxd5warkdzz17rgpidrd0pg14cy2svvnvy1hna080lzg7vp"; }; meta = with lib; { diff --git a/third_party/nixpkgs/doc/languages-frameworks/python.section.md b/third_party/nixpkgs/doc/languages-frameworks/python.section.md index feefefeabb..54face47d1 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/python.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/python.section.md @@ -1,10 +1,10 @@ # Python {#python} -## User Guide +## User Guide {#user-guide} -### Using Python +### Using Python {#using-python} -#### Overview +#### Overview {#overview} Several versions of the Python interpreter are available on Nix, as well as a high amount of packages. The attribute `python3` refers to the default @@ -31,7 +31,7 @@ The main package set contains aliases to these package sets, e.g. `pythonPackages` refers to `python.pkgs` and `python38Packages` to `python38.pkgs`. -#### Installing Python and packages +#### Installing Python and packages {#installing-python-and-packages} The Nix and NixOS manuals explain how packages are generally installed. In the case of Python and Nix, it is important to make a distinction between whether the @@ -62,7 +62,7 @@ Philosphically, this should be familiar to users who are used to a `venv` style of development: individual projects create their own Python environments without impacting the global environment or each other. -#### Ad-hoc temporary Python environment with `nix-shell` +#### Ad-hoc temporary Python environment with `nix-shell` {#ad-hoc-temporary-python-environment-with-nix-shell} The simplest way to start playing with the way nix wraps and sets up Python environments is with `nix-shell` at the cmdline. These environments create a @@ -131,7 +131,7 @@ arbitrary dependencies. This is a good way to get a feel for how the Python interpreter and dependencies work in Nix and NixOS, but to do some actual development, we'll want to make it a bit more persistent. -##### Running Python scripts and using `nix-shell` as shebang +##### Running Python scripts and using `nix-shell` as shebang {#running-python-scripts-and-using-nix-shell-as-shebang} Sometimes, we have a script whose header looks like this: @@ -146,7 +146,7 @@ print(f"The dot product of {a} and {b} is: {np.dot(a, b)}") Executing this script requires a `python3` that has `numpy`. Using what we learned in the previous section, we could startup a shell and just run it like so: -```ShellSesssion +```ShellSession $ nix-shell -p 'python38.withPackages(ps: with ps; [ numpy ])' --run 'python3 foo.py' The dot product of [1 2] and [3 4] is: 11 ``` @@ -203,7 +203,7 @@ of the package versions. This is also a great way to ensure the script executes identically on different servers. -##### Load environment from `.nix` expression +##### Load environment from `.nix` expression {#load-environment-from-.nix-expression} We've now seen how to create an ad-hoc temporary shell session, and how to create a single script with Python dependencies, but in the course of normal @@ -262,7 +262,7 @@ and its Python dependencies, but also tools like `black` or `mypy` and libraries like `libffi` the `openssl` in scope. This is generic and can span any number of tools or languages across the Nixpkgs ecosystem. -##### Installing environments globally on the system +##### Installing environments globally on the system {#installing-environments-globally-on-the-system} Up to now, we've been creating environments scoped to an ad-hoc shell session, or a single script, or a single project. This is generally advisable, as it @@ -315,7 +315,7 @@ If you get a conflict or prefer to keep the setup clean, you can have `nix-env` atomically *uninstall* all other imperatively installed packages and replace your profile with just `myEnv` by using the `--replace` flag. -##### Environment defined in `/etc/nixos/configuration.nix` +##### Environment defined in `/etc/nixos/configuration.nix` {#environment-defined-in-etcnixosconfiguration.nix} For the sake of completeness, here's how to install the environment system-wide on NixOS. @@ -329,7 +329,7 @@ on NixOS. } ``` -### Developing with Python +### Developing with Python {#developing-with-python} Above, we were mostly just focused on use cases and what to do to get started creating working Python environments in nix. @@ -338,7 +338,7 @@ Now that you know the basics to be up and running, it is time to take a step back and take a deeper look at how Python packages are packaged on Nix. Then, we will look at how you can use development mode with your code. -#### Python library packages in Nixpkgs +#### Python library packages in Nixpkgs {#python-library-packages-in-nixpkgs} With Nix all packages are built by functions. The main function in Nix for building Python libraries is `buildPythonPackage`. Let's see how we can build the @@ -425,7 +425,7 @@ of `withPackages` we used a `let` expression. You can see that we used `toolz` from the Nixpkgs package set this time, but instead took our own version that we introduced with the `let` expression. -#### Handling dependencies +#### Handling dependencies {#handling-dependencies} Our example, `toolz`, does not have any dependencies on other Python packages or system libraries. According to the manual, `buildPythonPackage` uses the @@ -537,9 +537,10 @@ buildPythonPackage rec { }; } ``` + Note also the line `doCheck = false;`, we explicitly disabled running the test-suite. -#### Testing Python Packages +#### Testing Python Packages {#testing-python-packages} It is highly encouraged to have testing as part of the package build. This helps to avoid situations where the package was able to build and install, @@ -559,10 +560,11 @@ thus can cause issues when a test suite asserts on that behavior. as many tests should be enabled as possible. Failing tests can still be a good indication that the package is not in a valid state. -#### Using pytest +#### Using pytest {#using-pytest} Pytest is the most common test runner for python repositories. A trivial test run would be: + ``` checkInputs = [ pytest ]; checkPhase = "pytest"; @@ -572,6 +574,7 @@ However, many repositories' test suites do not translate well to nix's build sandbox, and will generally need many tests to be disabled. To filter tests using pytest, one can do the following: + ``` checkInputs = [ pytest ]; # avoid tests which need additional data or touch network @@ -587,19 +590,20 @@ easier than having to create a new package. `-k` is used to define a predicate for test names. In this example, we are filtering out tests which contain `download` or `update` in their test case name. -Only one `-k` argument is allows, and thus a long predicate should be concatenated -with "\" and wrapped to the next line. +Only one `-k` argument is allowed, and thus a long predicate should be concatenated +with “\\” and wrapped to the next line. -*NOTE:* In pytest==6.0.1, the use of "\" to continue a line (e.g. `-k 'not download \'`) has +*NOTE:* In pytest==6.0.1, the use of “\\” to continue a line (e.g. `-k 'not download \'`) has been removed, in this case, it's recommended to use `pytestCheckHook`. -#### Using pytestCheckHook +#### Using pytestCheckHook {#using-pytestcheckhook} `pytestCheckHook` is a convenient hook which will substitute the setuptools `test` command for a checkPhase which runs `pytest`. This is also beneficial when a package may need many items disabled to run the test suite. Using the example above, the analagous pytestCheckHook usage would be: + ``` checkInputs = [ pytestCheckHook ]; @@ -637,7 +641,7 @@ Trying to concatenate the related strings to disable tests in a regular checkPha would be much harder to read. This also enables us to comment on why specific tests are disabled. -#### Using pythonImportsCheck +#### Using pythonImportsCheck {#using-pythonimportscheck} Although unit tests are highly prefered to validate correctness of a package, not all packages have test suites that can be ran easily, and some have none at all. @@ -659,7 +663,7 @@ However, this is done in it's own phase, and not dependent on whether `doCheck = This can also be useful in verifying that the package doesn't assume commonly present packages (e.g. `setuptools`) -### Develop local package +### Develop local package {#develop-local-package} As a Python developer you're likely aware of [development mode](http://setuptools.readthedocs.io/en/latest/setuptools.html#development-mode) (`python setup.py develop`); instead of installing the package this command @@ -694,7 +698,7 @@ buildPythonPackage rec { It is important to note that due to how development mode is implemented on Nix it is not possible to have multiple packages simultaneously in development mode. -### Organising your packages +### Organising your packages {#organising-your-packages} So far we discussed how you can use Python on Nix, and how you can develop with it. We've looked at how you write expressions to package Python packages, and we @@ -706,7 +710,7 @@ like to be able to use in different projects. In order to minimise unnecessary duplication we now look at how you can maintain a repository with your own packages. The important functions here are `import` and `callPackage`. -### Including a derivation using `callPackage` +### Including a derivation using `callPackage` {#including-a-derivation-using-callpackage} Earlier we created a Python environment using `withPackages`, and included the `toolz` package via a `let` expression. @@ -756,9 +760,9 @@ don't explicitly define which `python` derivation should be used. In the above example we use `buildPythonPackage` that is part of the set `python38Packages`, and in this case the `python38` interpreter is automatically used. -## Reference +## Reference {#reference} -### Interpreters +### Interpreters {#interpreters} Versions 2.7, 3.6, 3.7, 3.8 and 3.9 of the CPython interpreter are available as respectively `python27`, `python36`, `python37`, `python38` and `python39`. The @@ -773,11 +777,11 @@ All packages depending on any Python interpreter get appended `out/{python.sitePackages}` to `$PYTHONPATH` if such directory exists. -#### Missing `tkinter` module standard library +#### Missing `tkinter` module standard library {#missing-tkinter-module-standard-library} To reduce closure size the `Tkinter`/`tkinter` is available as a separate package, `pythonPackages.tkinter`. -#### Attributes on interpreters packages +#### Attributes on interpreters packages {#attributes-on-interpreters-packages} Each interpreter has the following attributes: @@ -789,7 +793,7 @@ Each interpreter has the following attributes: - `executable`. Name of the interpreter executable, e.g. `python3.8`. - `pkgs`. Set of Python packages for that specific interpreter. The package set can be modified by overriding the interpreter and passing `packageOverrides`. -### Optimizations +### Optimizations {#optimizations} The Python interpreters are by default not build with optimizations enabled, because the builds are in that case not reproducible. To enable optimizations, override the @@ -806,7 +810,7 @@ let in mypython ``` -### Building packages and applications +### Building packages and applications {#building-packages-and-applications} Python libraries and applications that use `setuptools` or `distutils` are typically built with respectively the `buildPythonPackage` and @@ -838,7 +842,7 @@ and the aliases * `pkgs.python3Packages` pointing to `pkgs.python38Packages` * `pkgs.pythonPackages` pointing to `pkgs.python2Packages` -#### `buildPythonPackage` function +#### `buildPythonPackage` function {#buildpythonpackage-function} The `buildPythonPackage` function is implemented in `pkgs/development/interpreters/python/mk-python-derivation` @@ -890,7 +894,7 @@ e.g. the test runner, should be added to `checkInputs`. By default `meta.platforms` is set to the same value as the interpreter unless overridden otherwise. -##### `buildPythonPackage` parameters +##### `buildPythonPackage` parameters {#buildpythonpackage-parameters} All parameters from `stdenv.mkDerivation` function are still supported. The following are specific to `buildPythonPackage`: @@ -946,7 +950,7 @@ because their behaviour is different: `buildPythonPackage` also injects code into and wraps executables with the paths included in this list. Items listed in `install_requires` go here. -##### Overriding Python packages +##### Overriding Python packages {#overriding-python-packages} The `buildPythonPackage` function has a `overridePythonAttrs` method that can be used to override the package. In the following example we create an environment @@ -974,7 +978,7 @@ with import {}; in python.withPackages(ps: [ps.blaze])).env ``` -#### `buildPythonApplication` function +#### `buildPythonApplication` function {#buildpythonapplication-function} The `buildPythonApplication` function is practically the same as `buildPythonPackage`. The main purpose of this function is to build a Python @@ -1019,7 +1023,7 @@ luigi = callPackage ../applications/networking/cluster/luigi { }; Since the package is an application, a consumer doesn't need to care about Python versions or modules, which is why they don't go in `pythonPackages`. -#### `toPythonApplication` function +#### `toPythonApplication` function {#topythonapplication-function} A distinction is made between applications and libraries, however, sometimes a package is used as both. In this case the package is added as a library to @@ -1031,11 +1035,12 @@ The Nix expression shall use `buildPythonPackage` and be called from `python-packages.nix`. A reference shall be created from `all-packages.nix` to the attribute in `python-packages.nix`, and the `toPythonApplication` shall be applied to the reference: + ```nix youtube-dl = with pythonPackages; toPythonApplication youtube-dl; ``` -#### `toPythonModule` function +#### `toPythonModule` function {#topythonmodule-function} In some cases, such as bindings, a package is created using `stdenv.mkDerivation` and added as attribute in `all-packages.nix`. The Python @@ -1052,7 +1057,7 @@ opencv = toPythonModule (pkgs.opencv.override { Do pay attention to passing in the right Python version! -#### `python.buildEnv` function +#### `python.buildEnv` function {#python.buildenv-function} Python environments can be created using the low-level `pkgs.buildEnv` function. This example shows how to create an environment that has the Pyramid Web Framework. @@ -1090,8 +1095,8 @@ with import {}; will drop you into a shell where Python will have the specified packages in its path. +##### `python.buildEnv` arguments {#python.buildenv-arguments} -##### `python.buildEnv` arguments * `extraLibs`: List of packages installed inside the environment. * `postBuild`: Shell command executed after the build of environment. @@ -1099,7 +1104,7 @@ specified packages in its path. * `permitUserSite`: Skip setting the `PYTHONNOUSERSITE` environment variable in wrapped binaries in the environment. -#### `python.withPackages` function +#### `python.withPackages` function {#python.withpackages-function} The `python.withPackages` function provides a simpler interface to the `python.buildEnv` functionality. It takes a function as an argument that is passed the set of python packages and returns the list @@ -1141,7 +1146,7 @@ need them, you have to use `python.buildEnv`. Python 2 namespace packages may provide `__init__.py` that collide. In that case `python.buildEnv` should be used with `ignoreCollisions = true`. -#### Setup hooks +#### Setup hooks {#setup-hooks} The following are setup hooks specifically for Python packages. Most of these are used in `buildPythonPackage`. @@ -1166,7 +1171,7 @@ are used in `buildPythonPackage`. - `wheelUnpackHook` to move a wheel to the correct folder so it can be installed with the `pipInstallHook`. -### Development mode +### Development mode {#development-mode} Development or editable mode is supported. To develop Python packages `buildPythonPackage` has additional logic inside `shellPhase` to run `pip @@ -1175,6 +1180,7 @@ install -e . --prefix $TMPDIR/`for the package. Warning: `shellPhase` is executed only if `setup.py` exists. Given a `default.nix`: + ```nix with import {}; @@ -1197,7 +1203,7 @@ nix-shell -p pythonPackages.pyramid zlib libjpeg git Note: There is a boolean value `lib.inNixShell` set to `true` if nix-shell is invoked. -### Tools +### Tools {#tools} Packages inside nixpkgs are written by hand. However many tools exist in community to help save time. No tool is preferred at the moment. @@ -1209,7 +1215,7 @@ community to help save time. No tool is preferred at the moment. - [nixpkgs-pytools](https://github.com/nix-community/nixpkgs-pytools) - [poetry2nix](https://github.com/nix-community/poetry2nix) -### Deterministic builds +### Deterministic builds {#deterministic-builds} The Python interpreters are now built deterministically. Minor modifications had to be made to the interpreters in order to generate deterministic bytecode. This @@ -1221,7 +1227,7 @@ have timestamp 1. The `buildPythonPackage` function sets `DETERMINISTIC_BUILD=1` and [PYTHONHASHSEED=0](https://docs.python.org/3.8/using/cmdline.html#envvar-PYTHONHASHSEED). Both are also exported in `nix-shell`. -### Automatic tests +### Automatic tests {#automatic-tests} It is recommended to test packages as part of the build process. Source distributions (`sdist`) often include test files, but not always. @@ -1230,7 +1236,7 @@ By default the command `python setup.py test` is run as part of the `checkPhase`, but often it is necessary to pass a custom `checkPhase`. An example of such a situation is when `py.test` is used. -#### Common issues +#### Common issues {#common-issues} * Non-working tests can often be deselected. By default `buildPythonPackage` runs `python setup.py test`. Most Python modules follows the standard test @@ -1247,18 +1253,19 @@ example of such a situation is when `py.test` is used. ''; } ``` + * Tests that attempt to access `$HOME` can be fixed by using the following work-around before running tests (e.g. `preCheck`): `export HOME=$(mktemp -d)` -## FAQ +## FAQ {#faq} -### How to solve circular dependencies? +### How to solve circular dependencies? {#how-to-solve-circular-dependencies} Consider the packages `A` and `B` that depend on each other. When packaging `B`, a solution is to override package `A` not to depend on `B` as an input. The same should also be done when packaging `A`. -### How to override a Python package? +### How to override a Python package? {#how-to-override-a-python-package} We can override the interpreter and pass `packageOverrides`. In the following example we rename the `pandas` package and build it. @@ -1316,7 +1323,7 @@ let in newpkgs.inkscape ``` -### `python setup.py bdist_wheel` cannot create .whl +### `python setup.py bdist_wheel` cannot create .whl {#python-setup.py-bdist_wheel-cannot-create-.whl} Executing `python setup.py bdist_wheel` in a `nix-shell `fails with ``` @@ -1349,7 +1356,7 @@ or unset `SOURCE_DATE_EPOCH`: nix-shell --run "unset SOURCE_DATE_EPOCH; python3 setup.py bdist_wheel" ``` -### `install_data` / `data_files` problems +### `install_data` / `data_files` problems {#install_data-data_files-problems} If you get the following error: @@ -1369,7 +1376,7 @@ ${python.interpreter} setup.py install_data --install-dir=$out --root=$out sed -i '/ = data\_files/d' setup.py ``` -### Rationale of non-existent global site-packages +### Rationale of non-existent global site-packages {#rationale-of-non-existent-global-site-packages} On most operating systems a global `site-packages` is maintained. This however becomes problematic if you want to run multiple Python versions or have multiple @@ -1384,7 +1391,7 @@ If you want to create a Python environment for development, then the recommended method is to use `nix-shell`, either with or without the `python.buildEnv` function. -### How to consume Python modules using pip in a virtual environment like I am used to on other Operating Systems? +### How to consume Python modules using pip in a virtual environment like I am used to on other Operating Systems? {#how-to-consume-python-modules-using-pip-in-a-virtual-environment-like-i-am-used-to-on-other-operating-systems} While this approach is not very idiomatic from Nix perspective, it can still be useful when dealing with pre-existing projects or in situations where it's not @@ -1497,7 +1504,7 @@ is executed it will attempt to download the Python modules listed in requirements.txt. However these will be cached locally within the `virtualenv` folder and not downloaded again. -### How to override a Python package from `configuration.nix`? +### How to override a Python package from `configuration.nix`? {#how-to-override-a-python-package-from-configuration.nix} If you need to change a package's attribute(s) from `configuration.nix` you could do: @@ -1535,7 +1542,7 @@ this snippet: } ``` -### How to override a Python package using overlays? +### How to override a Python package using overlays? {#how-to-override-a-python-package-using-overlays} Use the following overlay template: @@ -1556,12 +1563,12 @@ self: super: { } ``` -### How to use Intel's MKL with numpy and scipy? +### How to use Intel’s MKL with numpy and scipy? {#how-to-use-intels-mkl-with-numpy-and-scipy} MKL can be configured using an overlay. See the section "[Using overlays to configure alternatives](#sec-overlays-alternatives-blas-lapack)". -### What inputs do `setup_requires`, `install_requires` and `tests_require` map to? +### What inputs do `setup_requires`, `install_requires` and `tests_require` map to? {#what-inputs-do-setup_requires-install_requires-and-tests_require-map-to} In a `setup.py` or `setup.cfg` it is common to declare dependencies: @@ -1569,9 +1576,9 @@ In a `setup.py` or `setup.cfg` it is common to declare dependencies: * `install_requires` corresponds to `propagatedBuildInputs` * `tests_require` corresponds to `checkInputs` -## Contributing +## Contributing {#contributing} -### Contributing guidelines +### Contributing guidelines {#contributing-guidelines} The following rules are desired to be respected: diff --git a/third_party/nixpkgs/doc/languages-frameworks/qt.section.md b/third_party/nixpkgs/doc/languages-frameworks/qt.section.md index 6f8c9626e6..986deeb0d4 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/qt.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/qt.section.md @@ -90,19 +90,21 @@ stdenv.mkDerivation { } ``` -::: note +::: {.note} `wrapQtAppsHook` ignores files that are non-ELF executables. This means that scripts won't be automatically wrapped so you'll need to manually wrap them as previously mentioned. An example of when you'd always need to do this is with Python applications that use PyQt. ::: -## Adding a library to Nixpkgs +## Adding a library to Nixpkgs {#adding-a-library-to-nixpkgs} + Add Qt libraries to `qt5-packages.nix` to make them available for every supported Qt version. ### Example adding a Qt library {#qt-library-all-packages-nix} The following represents the contents of `qt5-packages.nix`. + ```nix { # ... @@ -126,13 +128,15 @@ stdenv.mkDerivation { } ``` -## Adding an application to Nixpkgs +## Adding an application to Nixpkgs {#adding-an-application-to-nixpkgs} + Add Qt applications to `qt5-packages.nix`. Add an alias to `all-packages.nix` to select the Qt 5 version used for the application. ### Example adding a Qt application {#qt-application-all-packages-nix} The following represents the contents of `qt5-packages.nix`. + ```nix { # ... @@ -144,6 +148,7 @@ The following represents the contents of `qt5-packages.nix`. ``` The following represents the contents of `all-packages.nix`. + ```nix { # ... diff --git a/third_party/nixpkgs/doc/languages-frameworks/r.section.md b/third_party/nixpkgs/doc/languages-frameworks/r.section.md index c420d112c9..56e3da64df 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/r.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/r.section.md @@ -1,6 +1,6 @@ # R {#r} -## Installation +## Installation {#installation} Define an environment for R that contains all the libraries that you'd like to use by adding the following snippet to your $HOME/.config/nixpkgs/config.nix file: @@ -31,6 +31,7 @@ output is the name that has to be passed to rWrapper in the code snipped above. However, if you'd like to add a file to your project source to make the environment available for other contributors, you can create a `default.nix` file like so: + ```nix with import {}; { @@ -50,7 +51,7 @@ with import {}; and then run `nix-shell .` to be dropped into a shell with those packages available. -## RStudio +## RStudio {#rstudio} RStudio uses a standard set of packages and ignores any custom R environments or installed packages you may have. To create a custom @@ -93,7 +94,7 @@ Executing `nix-shell` will then drop you into an environment equivalent to the one above. If you need additional packages just add them to the list and re-enter the shell. -## Updating the package set +## Updating the package set {#updating-the-package-set} ```bash nix-shell generate-shell.nix @@ -113,8 +114,7 @@ mv bioc-experiment-packages.nix.new bioc-experiment-packages.nix `generate-r-packages.R ` reads `-packages.nix`, therefor the renaming. - -## Testing if the Nix-expression could be evaluated +## Testing if the Nix-expression could be evaluated {#testing-if-the-nix-expression-could-be-evaluated} ```bash nix-build test-evaluation.nix --dry-run diff --git a/third_party/nixpkgs/doc/languages-frameworks/ruby.section.md b/third_party/nixpkgs/doc/languages-frameworks/ruby.section.md index b8fc19eb6b..36b794458c 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/ruby.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/ruby.section.md @@ -1,6 +1,6 @@ # Ruby {#sec-language-ruby} -## Using Ruby +## Using Ruby {#using-ruby} Several versions of Ruby interpreters are available on Nix, as well as over 250 gems and many applications written in Ruby. The attribute `ruby` refers to the default Ruby interpreter, which is currently MRI 2.6. It's also possible to refer to specific versions, e.g. `ruby_2_y`, `jruby`, or `mruby`. @@ -12,7 +12,7 @@ The interpreters have common attributes, namely `gems`, and `withPackages`. So y Since not all gems have executables like `nokogiri`, it's usually more convenient to use the `withPackages` function like this: `ruby.withPackages (p: with p; [ nokogiri ])`. This will also make sure that the Ruby in your environment will be able to find the gem and it can be used in your Ruby code (for example via `ruby` or `irb` executables) via `require "nokogiri"` as usual. -### Temporary Ruby environment with `nix-shell` +### Temporary Ruby environment with `nix-shell` {#temporary-ruby-environment-with-nix-shell} Rather than having a single Ruby environment shared by all Ruby development projects on a system, Nix allows you to create separate environments per project. `nix-shell` gives you the possibility to temporarily load another environment akin to a combined `chruby` or `rvm` and `bundle exec`. @@ -30,7 +30,7 @@ $ nix-shell -p ruby.gems.nokogiri ruby.gems.pry Again, it's possible to launch the interpreter from the shell. The Ruby interpreter has the attribute `gems` which contains all Ruby gems for that specific interpreter. -#### Load Ruby environment from `.nix` expression +#### Load Ruby environment from `.nix` expression {#load-ruby-environment-from-.nix-expression} As explained in the Nix manual, `nix-shell` can also load an expression from a `.nix` file. Say we want to have Ruby 2.6, `nokogori`, and `pry`. Consider a `shell.nix` file with: @@ -45,7 +45,7 @@ What's happening here? 2. Then we create a Ruby environment with the `withPackages` function. 3. The `withPackages` function expects us to provide a function as an argument that takes the set of all ruby gems and returns a list of packages to include in the environment. Here, we select the packages `nokogiri` and `pry` from the package set. -#### Execute command with `--run` +#### Execute command with `--run` {#execute-command-with---run} A convenient flag for `nix-shell` is `--run`. It executes a command in the `nix-shell`. We can e.g. directly open a `pry` REPL: @@ -65,7 +65,7 @@ Or run a script using this environment: $ nix-shell -p "ruby.withPackages (ps: with ps; [ nokogiri pry ])" --run "ruby example.rb" ``` -#### Using `nix-shell` as shebang +#### Using `nix-shell` as shebang {#using-nix-shell-as-shebang} In fact, for the last case, there is a more convenient method. You can add a [shebang]() to your script specifying which dependencies `nix-shell` needs. With the following shebang, you can just execute `./example.rb`, and it will run with all dependencies. @@ -80,9 +80,9 @@ body = RestClient.get('http://example.com').body puts Nokogiri::HTML(body).at('h1').text ``` -## Developing with Ruby +## Developing with Ruby {#developing-with-ruby} -### Using an existing Gemfile +### Using an existing Gemfile {#using-an-existing-gemfile} In most cases, you'll already have a `Gemfile.lock` listing all your dependencies. This can be used to generate a `gemset.nix` which is used to fetch the gems and combine them into a single environment. The reason why you need to have a separate file for this, is that Nix requires you to have a checksum for each input to your build. Since the `Gemfile.lock` that `bundler` generates doesn't provide us with checksums, we have to first download each gem, calculate its SHA256, and store it in this separate file. @@ -120,7 +120,7 @@ One common issue that you might have is that you have Ruby 2.6, but also `bundle mkShell { buildInputs = [ gems (lowPrio gems.wrappedRuby) ]; } ``` -### Gem-specific configurations and workarounds +### Gem-specific configurations and workarounds {#gem-specific-configurations-and-workarounds} In some cases, especially if the gem has native extensions, you might need to modify the way the gem is built. @@ -201,7 +201,7 @@ $ nix-shell --run 'ruby -rpg -e "puts PG.library_version"' Of course for this use-case one could also use overlays since the configuration for `pg` depends on the `postgresql` alias, but for demonstration purposes this has to suffice. -### Adding a gem to the default gemset +### Adding a gem to the default gemset {#adding-a-gem-to-the-default-gemset} Now that you know how to get a working Ruby environment with Nix, it's time to go forward and start actually developing with Ruby. We will first have a look at how Ruby gems are packaged on Nix. Then, we will look at how you can use development mode with your code. @@ -215,7 +215,7 @@ To test that it works, you can then try using the gem with: NIX_PATH=nixpkgs=$PWD nix-shell -p "ruby.withPackages (ps: with ps; [ name-of-your-gem ])" ``` -### Packaging applications +### Packaging applications {#packaging-applications} A common task is to add a ruby executable to nixpkgs, popular examples would be `chef`, `jekyll`, or `sass`. A good way to do that is to use the `bundlerApp` function, that allows you to make a package that only exposes the listed executables, otherwise the package may cause conflicts through common paths like `bin/rake` or `bin/bundler` that aren't meant to be used. @@ -243,7 +243,7 @@ bundlerApp { All that's left to do is to generate the corresponding `Gemfile.lock` and `gemset.nix` as described above in the `Using an existing Gemfile` section. -#### Packaging executables that require wrapping +#### Packaging executables that require wrapping {#packaging-executables-that-require-wrapping} Sometimes your app will depend on other executables at runtime, and tries to find it through the `PATH` environment variable. diff --git a/third_party/nixpkgs/doc/languages-frameworks/rust.section.md b/third_party/nixpkgs/doc/languages-frameworks/rust.section.md index 5ff7a5edef..f5c664bec2 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/rust.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/rust.section.md @@ -15,7 +15,7 @@ For other versions such as daily builds (beta and nightly), use either `rustup` from nixpkgs (which will manage the rust installation in your home directory), or use Mozilla's [Rust nightlies overlay](#using-the-rust-nightlies-overlay). -## Compiling Rust applications with Cargo +## Compiling Rust applications with Cargo {#compiling-rust-applications-with-cargo} Rust applications are packaged by using the `buildRustPackage` helper from `rustPlatform`: @@ -107,7 +107,7 @@ rustPlatform.buildRustPackage rec { } ``` -### Importing a `Cargo.lock` file +### Importing a `Cargo.lock` file {#importing-a-cargo.lock-file} Using `cargoSha256` or `cargoHash` is tedious when using `buildRustPackage` within a project, since it requires that the hash @@ -156,7 +156,7 @@ added. To find the correct hash, you can first use `lib.fakeSha256` or `lib.fakeHash` as a stub hash. Building the package (and thus the vendored dependencies) will then inform you of the correct hash. -### Cross compilation +### Cross compilation {#cross-compilation} By default, Rust packages are compiled for the host platform, just like any other package is. The `--target` passed to rust tools is computed from this. @@ -168,6 +168,7 @@ where they are known to differ. But there are ways to customize the argument: name will be used instead. For example: + ```nix import { crossSystem = (import ).systems.examples.armhf-embedded // { @@ -175,7 +176,9 @@ where they are known to differ. But there are ways to customize the argument: }; } ``` + will result in: + ```shell --target thumbv7em-none-eabi ``` @@ -188,6 +191,7 @@ where they are known to differ. But there are ways to customize the argument: will be used instead. For example: + ```nix import { crossSystem = (import ).systems.examples.armhf-embedded // { @@ -196,7 +200,9 @@ where they are known to differ. But there are ways to customize the argument: }; } ``` + will result in: + ```shell --target /nix/store/asdfasdfsadf-thumb-crazy.json # contains {"foo":"","bar":""} ``` @@ -220,7 +226,7 @@ ad-hoc escape hatch to `buildRustPackage` can be removed. Note that currently custom targets aren't compiled with `std`, so `cargo test` will fail. This can be ignored by adding `doCheck = false;` to your derivation. -### Running package tests +### Running package tests {#running-package-tests} When using `buildRustPackage`, the `checkPhase` is enabled by default and runs `cargo test` on the package to build. To make sure that we don't compile the @@ -248,7 +254,7 @@ Another attribute, called `checkFlags`, is used to pass arguments to the test binary itself, as stated (here)[https://doc.rust-lang.org/cargo/commands/cargo-test.html]. -#### Tests relying on the structure of the `target/` directory +#### Tests relying on the structure of the `target/` directory {#tests-relying-on-the-structure-of-the-target-directory} Some tests may rely on the structure of the `target/` directory. Those tests are likely to fail because we use `cargo --target` during the build. This means that @@ -258,7 +264,7 @@ rather than in `target/release/`. This can only be worked around by patching the affected tests accordingly. -#### Disabling package-tests +#### Disabling package-tests {#disabling-package-tests} In some instances, it may be necessary to disable testing altogether (with `doCheck = false;`): @@ -272,7 +278,7 @@ The above are just guidelines, and exceptions may be granted on a case-by-case b However, please check if it's possible to disable a problematic subset of the test suite and leave a comment explaining your reasoning. -#### Setting `test-threads` +#### Setting `test-threads` {#setting-test-threads} `buildRustPackage` will use parallel test threads by default, sometimes it may be necessary to disable this so the tests run consecutively. @@ -284,7 +290,7 @@ rustPlatform.buildRustPackage { } ``` -### Building a package in `debug` mode +### Building a package in `debug` mode {#building-a-package-in-debug-mode} By default, `buildRustPackage` will use `release` mode for builds. If a package should be built in `debug` mode, it can be configured like so: @@ -298,14 +304,14 @@ rustPlatform.buildRustPackage { In this scenario, the `checkPhase` will be ran in `debug` mode as well. -### Custom `build`/`install`-procedures +### Custom `build`/`install`-procedures {#custom-buildinstall-procedures} Some packages may use custom scripts for building/installing, e.g. with a `Makefile`. In these cases, it's recommended to override the `buildPhase`/`installPhase`/`checkPhase`. Otherwise, some steps may fail because of the modified directory structure of `target/`. -### Building a crate with an absent or out-of-date Cargo.lock file +### Building a crate with an absent or out-of-date Cargo.lock file {#building-a-crate-with-an-absent-or-out-of-date-cargo.lock-file} `buildRustPackage` needs a `Cargo.lock` file to get all dependencies in the source code in a reproducible way. If it is missing or out-of-date one can use @@ -321,13 +327,13 @@ rustPlatform.buildRustPackage rec { } ``` -## Compiling non-Rust packages that include Rust code +## Compiling non-Rust packages that include Rust code {#compiling-non-rust-packages-that-include-rust-code} Several non-Rust packages incorporate Rust code for performance- or security-sensitive parts. `rustPlatform` exposes several functions and hooks that can be used to integrate Cargo in non-Rust packages. -### Vendoring of dependencies +### Vendoring of dependencies {#vendoring-of-dependencies} Since network access is not allowed in sandboxed builds, Rust crate dependencies need to be retrieved using a fetcher. `rustPlatform` @@ -387,7 +393,7 @@ added. To find the correct hash, you can first use `lib.fakeSha256` or `lib.fakeHash` as a stub hash. Building `cargoDeps` will then inform you of the correct hash. -### Hooks +### Hooks {#hooks} `rustPlatform` provides the following hooks to automate Cargo builds: @@ -416,9 +422,9 @@ you of the correct hash. * `cargoInstallHook`: install binaries and static/shared libraries that were built using `cargoBuildHook`. -### Examples +### Examples {#examples} -#### Python package using `setuptools-rust` +#### Python package using `setuptools-rust` {#python-package-using-setuptools-rust} For Python packages using `setuptools-rust`, you can use `fetchCargoTarball` and `cargoSetupHook` to retrieve and set up Cargo @@ -504,7 +510,7 @@ buildPythonPackage rec { } ``` -#### Python package using `maturin` +#### Python package using `maturin` {#python-package-using-maturin} Python packages that use [Maturin](https://github.com/PyO3/maturin) can be built with `fetchCargoTarball`, `cargoSetupHook`, and @@ -545,9 +551,9 @@ buildPythonPackage rec { } ``` -## Compiling Rust crates using Nix instead of Cargo +## Compiling Rust crates using Nix instead of Cargo {#compiling-rust-crates-using-nix-instead-of-cargo} -### Simple operation +### Simple operation {#simple-operation} When run, `cargo build` produces a file called `Cargo.lock`, containing pinned versions of all dependencies. Nixpkgs contains a @@ -558,14 +564,15 @@ That Nix expression calls `rustc` directly (hence bypassing Cargo), and can be used to compile a crate and all its dependencies. Here is an example for a minimal `hello` crate: - - $ cargo new hello - $ cd hello - $ cargo build +```ShellSession +$ cargo new hello +$ cd hello +$ cargo build Compiling hello v0.1.0 (file:///tmp/hello) - Finished dev [unoptimized + debuginfo] target(s) in 0.20 secs - $ carnix -o hello.nix --src ./. Cargo.lock --standalone - $ nix-build hello.nix -A hello_0_1_0 + Finished dev [unoptimized + debuginfo] target(s) in 0.20 secs +$ carnix -o hello.nix --src ./. Cargo.lock --standalone +$ nix-build hello.nix -A hello_0_1_0 +``` Now, the file produced by the call to `carnix`, called `hello.nix`, looks like: @@ -644,7 +651,7 @@ Here, the `libc` crate has no `src` attribute, so `buildRustCrate` will fetch it from [crates.io](https://crates.io). A `sha256` attribute is still needed for Nix purity. -### Handling external dependencies +### Handling external dependencies {#handling-external-dependencies} Some crates require external libraries. For crates from [crates.io](https://crates.io), such libraries can be specified in @@ -703,7 +710,7 @@ with import {}; } ``` -### Options and phases configuration +### Options and phases configuration {#options-and-phases-configuration} Actually, the overrides introduced in the previous section are more general. A number of other parameters can be overridden: @@ -750,7 +757,7 @@ general. A number of other parameters can be overridden: }; ``` -### Features +### Features {#features} One can also supply features switches. For example, if we want to compile `diesel_cli` only with the `postgres` feature, and no default @@ -765,14 +772,15 @@ features, we would write: Where `diesel.nix` is the file generated by Carnix, as explained above. +## Setting Up `nix-shell` {#setting-up-nix-shell} -## Setting Up `nix-shell` Oftentimes you want to develop code from within `nix-shell`. Unfortunately `buildRustCrate` does not support common `nix-shell` operations directly (see [this issue](https://github.com/NixOS/nixpkgs/issues/37945)) so we will use `stdenv.mkDerivation` instead. Using the example `hello` project above, we want to do the following: + - Have access to `cargo` and `rustc` - Have the `openssl` library available to a crate through it's _normal_ compilation mechanism (`pkg-config`). @@ -801,13 +809,15 @@ stdenv.mkDerivation { ``` You should now be able to run the following: -```ShellSesssion + +```ShellSession $ nix-shell --pure $ cargo build $ cargo test ``` -### Controlling Rust Version Inside `nix-shell` +### Controlling Rust Version Inside `nix-shell` {#controlling-rust-version-inside-nix-shell} + To control your rust version (i.e. use nightly) from within `shell.nix` (or other nix expressions) you can use the following `shell.nix` @@ -839,6 +849,7 @@ stdenv.mkDerivation { ``` Now run: + ```ShellSession $ rustc --version rustc 1.26.0-nightly (188e693b3 2018-03-26) @@ -846,31 +857,32 @@ rustc 1.26.0-nightly (188e693b3 2018-03-26) To see that you are using nightly. - -## Using the Rust nightlies overlay +## Using the Rust nightlies overlay {#using-the-rust-nightlies-overlay} Mozilla provides an overlay for nixpkgs to bring a nightly version of Rust into scope. This overlay can _also_ be used to install recent unstable or stable versions of Rust, if desired. -### Rust overlay installation +### Rust overlay installation {#rust-overlay-installation} You can use this overlay by either changing your local nixpkgs configuration, or by adding the overlay declaratively in a nix expression, e.g. in `configuration.nix`. -For more information see [#sec-overlays-install](the manual on installing overlays). +For more information see [the manual on installing overlays](#sec-overlays-install). -#### Imperative rust overlay installation +#### Imperative rust overlay installation {#imperative-rust-overlay-installation} Clone [nixpkgs-mozilla](https://github.com/mozilla/nixpkgs-mozilla), and create a symbolic link to the file [rust-overlay.nix](https://github.com/mozilla/nixpkgs-mozilla/blob/master/rust-overlay.nix) in the `~/.config/nixpkgs/overlays` directory. - $ git clone https://github.com/mozilla/nixpkgs-mozilla.git - $ mkdir -p ~/.config/nixpkgs/overlays - $ ln -s $(pwd)/nixpkgs-mozilla/rust-overlay.nix ~/.config/nixpkgs/overlays/rust-overlay.nix +```ShellSession +$ git clone https://github.com/mozilla/nixpkgs-mozilla.git +$ mkdir -p ~/.config/nixpkgs/overlays +$ ln -s $(pwd)/nixpkgs-mozilla/rust-overlay.nix ~/.config/nixpkgs/overlays/rust-overlay.nix +``` -### Declarative rust overlay installation +### Declarative rust overlay installation {#declarative-rust-overlay-installation} Add the following to your `configuration.nix`, `home-configuration.nix`, `shell.nix`, or similar: @@ -886,7 +898,7 @@ Add the following to your `configuration.nix`, `home-configuration.nix`, `shell. Note that this will fetch the latest overlay version when rebuilding your system. -### Rust overlay usage +### Rust overlay usage {#rust-overlay-usage} The overlay contains attribute sets corresponding to different versions of the rust toolchain, such as: @@ -900,11 +912,15 @@ For example, you might want to add `latest.rustChannels.stable.rust` to the list Imperatively, the latest stable version can be installed with the following command: - $ nix-env -Ai nixpkgs.latest.rustChannels.stable.rust +```ShellSession +$ nix-env -Ai nixpkgs.latest.rustChannels.stable.rust +``` Or using the attribute with nix-shell: - $ nix-shell -p nixpkgs.latest.rustChannels.stable.rust +```ShellSession +$ nix-shell -p nixpkgs.latest.rustChannels.stable.rust +``` Substitute the `nixpkgs` prefix with `nixos` on NixOS. To install the beta or nightly channel, "stable" should be substituted by diff --git a/third_party/nixpkgs/doc/languages-frameworks/texlive.section.md b/third_party/nixpkgs/doc/languages-frameworks/texlive.section.md index c3028731f4..6b505cefcc 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/texlive.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/texlive.section.md @@ -5,6 +5,7 @@ Since release 15.09 there is a new TeX Live packaging that lives entirely under ## User's guide {#sec-language-texlive-user-guide} - For basic usage just pull `texlive.combined.scheme-basic` for an environment with basic LaTeX support. + - It typically won't work to use separately installed packages together. Instead, you can build a custom set of packages like this: ```nix @@ -14,6 +15,7 @@ Since release 15.09 there is a new TeX Live packaging that lives entirely under ``` - There are all the schemes, collections and a few thousand packages, as defined upstream (perhaps with tiny differences). + - By default you only get executables and files needed during runtime, and a little documentation for the core packages. To change that, you need to add `pkgFilter` function to `combine`. ```nix diff --git a/third_party/nixpkgs/doc/languages-frameworks/titanium.section.md b/third_party/nixpkgs/doc/languages-frameworks/titanium.section.md index 57360f034b..306ad86627 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/titanium.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/titanium.section.md @@ -9,8 +9,8 @@ applications for Android and iOS devices from source code. Not all Titanium features supported -- currently, it can only be used to build Android and iOS apps. -Building a Titanium app ------------------------ +## Building a Titanium app {#building-a-titanium-app} + We can build a Titanium app from source for Android or iOS and for debugging or release purposes by invoking the `titaniumenv.buildApp {}` function: @@ -103,8 +103,8 @@ When `enableWirelessDistribution` has been enabled, you must also provide the path of the PHP script (`installURL`) (that is included with the iOS build environment) to enable wireless ad-hoc installations. -Emulating or simulating the app -------------------------------- +## Emulating or simulating the app {#emulating-or-simulating-the-app} + It is also possible to simulate the correspond iOS simulator build by using `xcodeenv.simulateApp {}` and emulate an Android APK by using `androidenv.emulateApp {}`. diff --git a/third_party/nixpkgs/doc/languages-frameworks/vim.section.md b/third_party/nixpkgs/doc/languages-frameworks/vim.section.md index 5316db9a13..e170591605 100644 --- a/third_party/nixpkgs/doc/languages-frameworks/vim.section.md +++ b/third_party/nixpkgs/doc/languages-frameworks/vim.section.md @@ -12,7 +12,7 @@ At the moment we support three different methods for managing plugins: - Pathogen - vim-plug -## Custom configuration +## Custom configuration {#custom-configuration} Adding custom .vimrc lines can be done using the following code: @@ -56,7 +56,7 @@ neovim-qt.override { } ``` -## Managing plugins with Vim packages +## Managing plugins with Vim packages {#managing-plugins-with-vim-packages} To store you plugins in Vim packages (the native Vim plugin manager, see `:help packages`) the following example can be used: @@ -116,7 +116,7 @@ The resulting package can be added to `packageOverrides` in `~/.nixpkgs/config.n After that you can install your special grafted `myVim` or `myNeovim` packages. -### What if your favourite Vim plugin isn't already packaged? +### What if your favourite Vim plugin isn’t already packaged? {#what-if-your-favourite-vim-plugin-isnt-already-packaged} If one of your favourite plugins isn't packaged, you can package it yourself: @@ -154,7 +154,7 @@ in } ``` -## Managing plugins with vim-plug +## Managing plugins with vim-plug {#managing-plugins-with-vim-plug} To use [vim-plug](https://github.com/junegunn/vim-plug) to manage your Vim plugins the following example can be used: @@ -183,14 +183,14 @@ neovim.override { } ``` -## Managing plugins with VAM +## Managing plugins with VAM {#managing-plugins-with-vam} -### Handling dependencies of Vim plugins +### Handling dependencies of Vim plugins {#handling-dependencies-of-vim-plugins} VAM introduced .json files supporting dependencies without versioning assuming that "using latest version" is ok most of the time. -### Example +### Example {#example} First create a vim-scripts file having one plugin name per line. Example: @@ -280,7 +280,7 @@ Sample output2: ] ``` -## Adding new plugins to nixpkgs +## Adding new plugins to nixpkgs {#adding-new-plugins-to-nixpkgs} Nix expressions for Vim plugins are stored in [pkgs/misc/vim-plugins](/pkgs/misc/vim-plugins). For the vast majority of plugins, Nix expressions are automatically generated by running [`./update.py`](/pkgs/misc/vim-plugins/update.py). This creates a [generated.nix](/pkgs/misc/vim-plugins/generated.nix) file based on the plugins listed in [vim-plugin-names](/pkgs/misc/vim-plugins/vim-plugin-names). Plugins are listed in alphabetical order in `vim-plugin-names` using the format `[github username]/[repository]`. For example https://github.com/scrooloose/nerdtree becomes `scrooloose/nerdtree`. @@ -298,7 +298,7 @@ To add a new plugin, run `./update.py --add "[owner]/[name]"`. **NOTE**: This sc Finally, there are some plugins that are also packaged in nodePackages because they have Javascript-related build steps, such as running webpack. Those plugins are not listed in `vim-plugin-names` or managed by `update.py` at all, and are included separately in `overrides.nix`. Currently, all these plugins are related to the `coc.nvim` ecosystem of Language Server Protocol integration with vim/neovim. -## Updating plugins in nixpkgs +## Updating plugins in nixpkgs {#updating-plugins-in-nixpkgs} Run the update script with a GitHub API token that has at least `public_repo` access. Running the script without the token is likely to result in rate-limiting (429 errors). For steps on creating an API token, please refer to [GitHub's token documentation](https://docs.github.com/en/free-pro-team@latest/github/authenticating-to-github/creating-a-personal-access-token). @@ -312,7 +312,7 @@ Alternatively, set the number of processes to a lower count to avoid rate-limiti ./pkgs/misc/vim-plugins/update.py --proc 1 ``` -## Important repositories +## Important repositories {#important-repositories} - [vim-pi](https://bitbucket.org/vimcommunity/vim-pi) is a plugin repository from VAM plugin manager meant to be used by others as well used by diff --git a/third_party/nixpkgs/doc/preface.chapter.md b/third_party/nixpkgs/doc/preface.chapter.md index 64c921c711..16f228272b 100644 --- a/third_party/nixpkgs/doc/preface.chapter.md +++ b/third_party/nixpkgs/doc/preface.chapter.md @@ -12,7 +12,7 @@ Nixpkgs. If you like to learn more about the Nix package manager and the Nix expression language, then you are kindly referred to the [Nix manual](https://nixos.org/nix/manual/). The NixOS distribution is documented in the [NixOS manual](https://nixos.org/nixos/manual/). -## Overview of Nixpkgs +## Overview of Nixpkgs {#overview-of-nixpkgs} Nix expressions describe how to build packages from source and are collected in the [nixpkgs repository](https://github.com/NixOS/nixpkgs). Also included in the diff --git a/third_party/nixpkgs/doc/stdenv/cross-compilation.chapter.md b/third_party/nixpkgs/doc/stdenv/cross-compilation.chapter.md index 3755c13fac..53522962a5 100644 --- a/third_party/nixpkgs/doc/stdenv/cross-compilation.chapter.md +++ b/third_party/nixpkgs/doc/stdenv/cross-compilation.chapter.md @@ -6,7 +6,6 @@ This chapter will be organized in three parts. First, it will describe the basics of how to package software in a way that supports cross-compilation. Second, it will describe how to use Nixpkgs when cross-compiling. Third, it will describe the internal infrastructure supporting cross-compilation. - ## Packaging in a cross-friendly manner {#sec-cross-packaging} ### Platform parameters {#ssec-cross-platform-parameters} @@ -65,8 +64,8 @@ The exact schema these fields follow is a bit ill-defined due to a long and conv ### Theory of dependency categorization {#ssec-cross-dependency-categorization} -::: note -This is a rather philosophical description that isn't very Nixpkgs-specific. For an overview of all the relevant attributes given to `mkDerivation`, see . For a description of how everything is implemented, see . +::: {.note} +This is a rather philosophical description that isn't very Nixpkgs-specific. For an overview of all the relevant attributes given to `mkDerivation`, see [](#ssec-stdenv-dependencies). For a description of how everything is implemented, see [](#ssec-cross-dependency-implementation). ::: In this section we explore the relationship between both runtime and build-time dependencies and the 3 Autoconf platforms. @@ -81,10 +80,10 @@ Finally, if the depending package is a compiler or other machine-code-producing Putting this all together, that means we have dependencies in the form "host → target", in at most the following six combinations: +#### Possible dependency types {#possible-dependency-types} -#### Possible dependency types -| Dependency's host platform | Dependency's target platform | -| -- | -- | +| Dependency’s host platform | Dependency’s target platform | +|----------------------------|------------------------------| | build | build | | build | host | | build | target | @@ -113,15 +112,18 @@ On less powerful machines, it can be inconvenient to cross-compile a package onl $ nix-build '' -A pkgsCross.raspberryPi.hello ``` -#### What if my package's build system needs to build a C program to be run under the build environment? {#cross-qa-build-c-program-in-build-environment} +#### What if my package’s build system needs to build a C program to be run under the build environment? {#cross-qa-build-c-program-in-build-environment} + Add the following to your `mkDerivation` invocation. + ```nix depsBuildBuild = [ buildPackages.stdenv.cc ]; ``` -#### My package's testsuite needs to run host platform code. {#cross-testsuite-runs-host-code} +#### My package’s testsuite needs to run host platform code. {#cross-testsuite-runs-host-code} Add the following to your `mkDerivation` invocation. + ```nix doCheck = stdenv.hostPlatform == stdenv.buildPlatform; ``` @@ -134,7 +136,7 @@ Nixpkgs can be instantiated with `localSystem` alone, in which case there is no $ nix-build '' --arg crossSystem '(import ).systems.examples.fooBarBaz' -A whatever ``` -::: note +::: {.note} Eventually we would like to make these platform examples an unnecessary convenience so that ```ShellSession @@ -146,7 +148,7 @@ works in the vast majority of cases. The problem today is dependencies on other While one is free to pass both parameters in full, there's a lot of logic to fill in missing fields. As discussed in the previous section, only one of `system`, `config`, and `parsed` is needed to infer the other two. Additionally, `libc` will be inferred from `parse`. Finally, `localSystem.system` is also _impurely_ inferred based on the platform evaluation occurs. This means it is often not necessary to pass `localSystem` at all, as in the command-line example in the previous paragraph. -::: note +::: {.note} Many sources (manual, wiki, etc) probably mention passing `system`, `platform`, along with the optional `crossSystem` to Nixpkgs: `import { system = ..; platform = ..; crossSystem = ..; }`. Passing those two instead of `localSystem` is still supported for compatibility, but is discouraged. Indeed, much of the inference we do for these parameters is motivated by compatibility as much as convenience. ::: @@ -156,7 +158,7 @@ One would think that `localSystem` and `crossSystem` overlap horribly with the t ### Implementation of dependencies {#ssec-cross-dependency-implementation} -The categories of dependencies developed in are specified as lists of derivations given to `mkDerivation`, as documented in . In short, each list of dependencies for "host → target" of "foo → bar" is called `depsFooBar`, with exceptions for backwards compatibility that `depsBuildHost` is instead called `nativeBuildInputs` and `depsHostTarget` is instead called `buildInputs`. Nixpkgs is now structured so that each `depsFooBar` is automatically taken from `pkgsFooBar`. (These `pkgsFooBar`s are quite new, so there is no special case for `nativeBuildInputs` and `buildInputs`.) For example, `pkgsBuildHost.gcc` should be used at build-time, while `pkgsHostTarget.gcc` should be used at run-time. +The categories of dependencies developed in [](#ssec-cross-dependency-categorization) are specified as lists of derivations given to `mkDerivation`, as documented in [](#ssec-stdenv-dependencies). In short, each list of dependencies for "host → target" of "foo → bar" is called `depsFooBar`, with exceptions for backwards compatibility that `depsBuildHost` is instead called `nativeBuildInputs` and `depsHostTarget` is instead called `buildInputs`. Nixpkgs is now structured so that each `depsFooBar` is automatically taken from `pkgsFooBar`. (These `pkgsFooBar`s are quite new, so there is no special case for `nativeBuildInputs` and `buildInputs`.) For example, `pkgsBuildHost.gcc` should be used at build-time, while `pkgsHostTarget.gcc` should be used at run-time. Now, for most of Nixpkgs's history, there were no `pkgsFooBar` attributes, and most packages have not been refactored to use it explicitly. Prior to those, there were just `buildPackages`, `pkgs`, and `targetPackages`. Those are now redefined as aliases to `pkgsBuildHost`, `pkgsHostTarget`, and `pkgsTargetTarget`. It is acceptable, even recommended, to use them for libraries to show that the host platform is irrelevant. @@ -178,7 +180,7 @@ While there are many package sets, and thus many edges, the stages can also be a In each stage, `pkgsBuildHost` refers to the previous stage, `pkgsBuildBuild` refers to the one before that, and `pkgsHostTarget` refers to the current one, and `pkgsTargetTarget` refers to the next one. When there is no previous or next stage, they instead refer to the current stage. Note how all the invariants regarding the mapping between dependency and depending packages' build host and target platforms are preserved. `pkgsBuildTarget` and `pkgsHostHost` are more complex in that the stage fitting the requirements isn't always a fixed chain of "prevs" and "nexts" away (modulo the "saturating" self-references at the ends). We just special case each instead. All the primary edges are implemented is in `pkgs/stdenv/booter.nix`, and secondarily aliases in `pkgs/top-level/stage.nix`. -::: note +::: {.note} The native stages are bootstrapped in legacy ways that predate the current cross implementation. This is why the bootstrapping stages leading up to the final stages are ignored in the previous paragraph. ::: @@ -186,6 +188,7 @@ If one looks at the 3 platform triples, one can see that they overlap such that ``` (native, native, native, foreign, foreign) ``` + If one imagines the saturating self references at the end being replaced with infinite stages, and then overlays those platform triples, one ends up with the infinite tuple: ``` (native..., native, native, native, foreign, foreign, foreign...) @@ -193,8 +196,8 @@ If one imagines the saturating self references at the end being replaced with in One can then imagine any sequence of platforms such that there are bootstrap stages with their 3 platforms determined by "sliding a window" that is the 3 tuple through the sequence. This was the original model for bootstrapping. Without a target platform (assume a better world where all compilers are multi-target and all standard libraries are built in their own derivation), this is sufficient. Conversely if one wishes to cross compile "faster", with a "Canadian Cross" bootstrapping stage where `build != host != target`, more bootstrapping stages are needed since no sliding window provides the pesky `pkgsBuildTarget` package set since it skips the Canadian cross stage's "host". -::: note -It is much better to refer to `buildPackages` than `targetPackages`, or more broadly package sets that do not mention "target". There are three reasons for this. +::: {.note} +It is much better to refer to `buildPackages` than `targetPackages`, or more broadly package sets that do not mention “target”. There are three reasons for this. First, it is because bootstrapping stages do not have a unique `targetPackages`. For example a `(x86-linux, x86-linux, arm-linux)` and `(x86-linux, x86-linux, x86-windows)` package set both have a `(x86-linux, x86-linux, x86-linux)` package set. Because there is no canonical `targetPackages` for such a native (`build == host == target`) package set, we set their `targetPackages` @@ -203,6 +206,6 @@ Second, it is because this is a frequent source of hard-to-follow "infinite recu Thirdly, it is because everything target-mentioning only exists to accommodate compilers with lousy build systems that insist on the compiler itself and standard library being built together. Of course that is bad because bigger derivations means longer rebuilds. It is also problematic because it tends to make the standard libraries less like other libraries than they could be, complicating code and build systems alike. Because of the other problems, and because of these innate disadvantages, compilers ought to be packaged another way where possible. ::: -::: note -If one explores Nixpkgs, they will see derivations with names like `gccCross`. Such `*Cross` derivations is a holdover from before we properly distinguished between the host and target platforms—the derivation with "Cross" in the name covered the `build = host != target` case, while the other covered the `host = target`, with build platform the same or not based on whether one was using its `.nativeDrv` or `.crossDrv`. This ugliness will disappear soon. +::: {.note} +If one explores Nixpkgs, they will see derivations with names like `gccCross`. Such `*Cross` derivations is a holdover from before we properly distinguished between the host and target platforms—the derivation with “Cross” in the name covered the `build = host != target` case, while the other covered the `host = target`, with build platform the same or not based on whether one was using its `.nativeDrv` or `.crossDrv`. This ugliness will disappear soon. ::: diff --git a/third_party/nixpkgs/doc/stdenv/meta.chapter.md b/third_party/nixpkgs/doc/stdenv/meta.chapter.md index dd9f532585..f226a72548 100644 --- a/third_party/nixpkgs/doc/stdenv/meta.chapter.md +++ b/third_party/nixpkgs/doc/stdenv/meta.chapter.md @@ -130,7 +130,7 @@ Attribute Set `lib.platforms` defines [various common lists](https://github.com/ ### `tests` {#var-meta-tests} -::: warning +::: {.warning} This attribute is special in that it is not actually under the `meta` attribute set but rather under the `passthru` attribute set. This is due to how `meta` attributes work, and the fact that they are supposed to contain only metadata, not derivations. ::: @@ -175,20 +175,20 @@ The `meta.license` attribute should preferably contain a value from `lib.license Although it’s typically better to indicate the specific license, a few generic options are available: -### `lib.licenses.free`, `"free"` +### `lib.licenses.free`, `"free"` {#lib.licenses.free-free} Catch-all for free software licenses not listed above. -### `lib.licenses.unfreeRedistributable`, `"unfree-redistributable"` +### `lib.licenses.unfreeRedistributable`, `"unfree-redistributable"` {#lib.licenses.unfreeredistributable-unfree-redistributable} Unfree package that can be redistributed in binary form. That is, it’s legal to redistribute the *output* of the derivation. This means that the package can be included in the Nixpkgs channel. Sometimes proprietary software can only be redistributed unmodified. Make sure the builder doesn’t actually modify the original binaries; otherwise we’re breaking the license. For instance, the NVIDIA X11 drivers can be redistributed unmodified, but our builder applies `patchelf` to make them work. Thus, its license is `"unfree"` and it cannot be included in the Nixpkgs channel. -### `lib.licenses.unfree`, `"unfree"` +### `lib.licenses.unfree`, `"unfree"` {#lib.licenses.unfree-unfree} Unfree package that cannot be redistributed. You can build it yourself, but you cannot redistribute the output of the derivation. Thus it cannot be included in the Nixpkgs channel. -### `lib.licenses.unfreeRedistributableFirmware`, `"unfree-redistributable-firmware"` +### `lib.licenses.unfreeRedistributableFirmware`, `"unfree-redistributable-firmware"` {#lib.licenses.unfreeredistributablefirmware-unfree-redistributable-firmware} This package supplies unfree, redistributable firmware. This is a separate value from `unfree-redistributable` because not everybody cares whether firmware is free. diff --git a/third_party/nixpkgs/doc/stdenv/multiple-output.chapter.md b/third_party/nixpkgs/doc/stdenv/multiple-output.chapter.md index 90bc25bef7..d04f83302a 100644 --- a/third_party/nixpkgs/doc/stdenv/multiple-output.chapter.md +++ b/third_party/nixpkgs/doc/stdenv/multiple-output.chapter.md @@ -6,7 +6,7 @@ The Nix language allows a derivation to produce multiple outputs, which is simil The main motivation is to save disk space by reducing runtime closure sizes; consequently also sizes of substituted binaries get reduced. Splitting can be used to have more granular runtime dependencies, for example the typical reduction is to split away development-only files, as those are typically not needed during runtime. As a result, closure sizes of many packages can get reduced to a half or even much less. -::: note +::: {.note} The reduction effects could be instead achieved by building the parts in completely separate derivations. That would often additionally reduce build-time closures, but it tends to be much harder to write such derivations, as build systems typically assume all parts are being built at once. This compromise approach of single source package producing multiple binary packages is also utilized often by rpm and deb. ::: @@ -28,7 +28,7 @@ NixOS provides two ways to select the outputs to install for packages listed in `nix-env` lacks an easy way to select the outputs to install. When installing a package, `nix-env` always installs the outputs listed in `meta.outputsToInstall`, even when the user explicitly selects an output. -::: warning +::: {.warning} `nix-env` silenty disregards the outputs selected by the user, and instead installs the outputs from `meta.outputsToInstall`. For example, ```ShellSession @@ -38,7 +38,7 @@ $ nix-env -iA nixpkgs.coreutils.info installs the `"out"` output (`coreutils.meta.outputsToInstall` is `[ "out" ]`) instead of the requested `"info"`. ::: -The only recourse to select an output with `nix-env` is to override the package’s `meta.outputsToInstall`, using the functions described in . For example, the following overlay adds the `"info"` output for the `coreutils` package: +The only recourse to select an output with `nix-env` is to override the package’s `meta.outputsToInstall`, using the functions described in [](#chap-overrides). For example, the following overlay adds the `"info"` output for the `coreutils` package: ```nix self: super: @@ -53,7 +53,7 @@ self: super: In the Nix language the individual outputs can be reached explicitly as attributes, e.g. `coreutils.info`, but the typical case is just using packages as build inputs. -When a multiple-output derivation gets into a build input of another derivation, the `dev` output is added if it exists, otherwise the first output is added. In addition to that, `propagatedBuildOutputs` of that package which by default contain `$outputBin` and `$outputLib` are also added. (See .) +When a multiple-output derivation gets into a build input of another derivation, the `dev` output is added if it exists, otherwise the first output is added. In addition to that, `propagatedBuildOutputs` of that package which by default contain `$outputBin` and `$outputLib` are also added. (See [](#multiple-output-file-type-groups).) In some cases it may be desirable to combine different outputs under a single store path. A function `symlinkJoin` can be used to do this. (Note that it may negate some closure size benefits of using a multiple-output package.) @@ -69,8 +69,8 @@ outputs = [ "bin" "dev" "out" "doc" ]; Often such a single line is enough. For each output an equally named environment variable is passed to the builder and contains the path in nix store for that output. Typically you also want to have the main `out` output, as it catches any files that didn’t get elsewhere. -::: note -There is a special handling of the `debug` output, described at . +::: {.note} +There is a special handling of the `debug` output, described at [](#stdenv-separateDebugInfo). ::: ### “Binaries first” {#multiple-output-file-binaries-first-convention} @@ -85,35 +85,35 @@ The reason for why `glibc` deviates from the convention is because referencing a The support code currently recognizes some particular kinds of outputs and either instructs the build system of the package to put files into their desired outputs or it moves the files during the fixup phase. Each group of file types has an `outputFoo` variable specifying the output name where they should go. If that variable isn’t defined by the derivation writer, it is guessed – a default output name is defined, falling back to other possibilities if the output isn’t defined. -#### ` $outputDev` +#### `$outputDev` {#outputdev} is for development-only files. These include C(++) headers (`include/`), pkg-config (`lib/pkgconfig/`), cmake (`lib/cmake/`) and aclocal files (`share/aclocal/`). They go to `dev` or `out` by default. -#### ` $outputBin` +#### `$outputBin` {#outputbin} is meant for user-facing binaries, typically residing in `bin/`. They go to `bin` or `out` by default. -#### ` $outputLib` +#### `$outputLib` {#outputlib} is meant for libraries, typically residing in `lib/` and `libexec/`. They go to `lib` or `out` by default. -#### ` $outputDoc` +#### `$outputDoc` {#outputdoc} is for user documentation, typically residing in `share/doc/`. It goes to `doc` or `out` by default. -#### ` $outputDevdoc` +#### `$outputDevdoc` {#outputdevdoc} is for _developer_ documentation. Currently we count gtk-doc and devhelp books, typically residing in `share/gtk-doc/` and `share/devhelp/`, in there. It goes to `devdoc` or is removed (!) by default. This is because e.g. gtk-doc tends to be rather large and completely unused by nixpkgs users. -#### ` $outputMan` +#### `$outputMan` {#outputman} is for man pages (except for section 3), typically residing in `share/man/man[0-9]/`. They go to `man` or `$outputBin` by default. -#### ` $outputDevman` +#### `$outputDevman` {#outputdevman} is for section 3 man pages, typically residing in `share/man/man[0-9]/`. They go to `devman` or `$outputMan` by default. -#### ` $outputInfo` +#### `$outputInfo` {#outputinfo} is for info pages, typically residing in `share/info/`. They go to `info` or `$outputBin` by default. diff --git a/third_party/nixpkgs/doc/stdenv/stdenv.chapter.md b/third_party/nixpkgs/doc/stdenv/stdenv.chapter.md index b23c50e836..7219b5e80f 100644 --- a/third_party/nixpkgs/doc/stdenv/stdenv.chapter.md +++ b/third_party/nixpkgs/doc/stdenv/stdenv.chapter.md @@ -39,9 +39,9 @@ stdenv.mkDerivation { } ``` -This attribute ensures that the `bin` subdirectories of these packages appear in the `PATH` environment variable during the build, that their `include` subdirectories are searched by the C compiler, and so on. (See for details.) +This attribute ensures that the `bin` subdirectories of these packages appear in the `PATH` environment variable during the build, that their `include` subdirectories are searched by the C compiler, and so on. (See [](#ssec-setup-hooks) for details.) -Often it is necessary to override or modify some aspect of the build. To make this easier, the standard environment breaks the package build into a number of *phases*, all of which can be overridden or modified individually: unpacking the sources, applying patches, configuring, building, and installing. (There are some others; see .) For instance, a package that doesn’t supply a makefile but instead has to be compiled "manually" could be handled like this: +Often it is necessary to override or modify some aspect of the build. To make this easier, the standard environment breaks the package build into a number of *phases*, all of which can be overridden or modified individually: unpacking the sources, applying patches, configuring, building, and installing. (There are some others; see [](#sec-stdenv-phases).) For instance, a package that doesn’t supply a makefile but instead has to be compiled "manually" could be handled like this: ```nix stdenv.mkDerivation { @@ -59,7 +59,7 @@ stdenv.mkDerivation { (Note the use of `''`-style string literals, which are very convenient for large multi-line script fragments because they don’t need escaping of `"` and `\`, and because indentation is intelligently removed.) -There are many other attributes to customise the build. These are listed in . +There are many other attributes to customise the build. These are listed in [](#ssec-stdenv-attributes). While the standard environment provides a generic builder, you can still supply your own build script: @@ -116,9 +116,9 @@ On Linux, `stdenv` also includes the `patchelf` utility. ## Specifying dependencies {#ssec-stdenv-dependencies} -As described in the Nix manual, almost any `*.drv` store path in a derivation’s attribute set will induce a dependency on that derivation. `mkDerivation`, however, takes a few attributes intended to, between them, include all the dependencies of a package. This is done both for structure and consistency, but also so that certain other setup can take place. For example, certain dependencies need their bin directories added to the `PATH`. That is built-in, but other setup is done via a pluggable mechanism that works in conjunction with these dependency attributes. See for details. +As described in the Nix manual, almost any `*.drv` store path in a derivation’s attribute set will induce a dependency on that derivation. `mkDerivation`, however, takes a few attributes intended to, between them, include all the dependencies of a package. This is done both for structure and consistency, but also so that certain other setup can take place. For example, certain dependencies need their bin directories added to the `PATH`. That is built-in, but other setup is done via a pluggable mechanism that works in conjunction with these dependency attributes. See [](#ssec-setup-hooks) for details. -Dependencies can be broken down along three axes: their host and target platforms relative to the new derivation’s, and whether they are propagated. The platform distinctions are motivated by cross compilation; see for exactly what each platform means. [^footnote-stdenv-ignored-build-platform] But even if one is not cross compiling, the platforms imply whether or not the dependency is needed at run-time or build-time, a concept that makes perfect sense outside of cross compilation. By default, the run-time/build-time distinction is just a hint for mental clarity, but with `strictDeps` set it is mostly enforced even in the native case. +Dependencies can be broken down along three axes: their host and target platforms relative to the new derivation’s, and whether they are propagated. The platform distinctions are motivated by cross compilation; see [](#chap-cross) for exactly what each platform means. [^footnote-stdenv-ignored-build-platform] But even if one is not cross compiling, the platforms imply whether or not the dependency is needed at run-time or build-time, a concept that makes perfect sense outside of cross compilation. By default, the run-time/build-time distinction is just a hint for mental clarity, but with `strictDeps` set it is mostly enforced even in the native case. The extension of `PATH` with dependencies, alluded to above, proceeds according to the relative platforms alone. The process is carried out only for dependencies whose host platform matches the new derivation’s build platform i.e. dependencies which run on the platform where the new derivation will be built. [^footnote-stdenv-native-dependencies-in-path] For each dependency \ of those dependencies, `dep/bin`, if present, is added to the `PATH` environment variable. @@ -175,7 +175,8 @@ Because of the bounds checks, the uncommon cases are `h = t` and `h + 2 = t`. In Overall, the unifying theme here is that propagation shouldn’t be introducing transitive dependencies involving platforms the depending package is unaware of. \[One can imagine the dependending package asking for dependencies with the platforms it knows about; other platforms it doesn’t know how to ask for. The platform description in that scenario is a kind of unforagable capability.\] The offset bounds checking and definition of `mapOffset` together ensure that this is the case. Discovering a new offset is discovering a new platform, and since those platforms weren’t in the derivation “spec” of the needing package, they cannot be relevant. From a capability perspective, we can imagine that the host and target platforms of a package are the capabilities a package requires, and the depending package must provide the capability to the dependency. -### Variables specifying dependencies +### Variables specifying dependencies {#variables-specifying-dependencies} + #### `depsBuildBuild` {#var-stdenv-depsBuildBuild} A list of dependencies whose host and target platforms are the new derivation’s build platform. This means a `-1` host and `-1` target offset from the new derivation’s platforms. These are programs and libraries used at build time that produce programs and libraries also used at build time. If the dependency doesn’t care about the target platform (i.e. isn’t a compiler or similar tool), put it in `nativeBuildInputs` instead. The most common use of this `buildPackages.stdenv.cc`, the default C compiler for this role. That example crops up more than one might think in old commonly used C libraries. @@ -236,13 +237,13 @@ The propagated equivalent of `depsTargetTarget`. This is prefixed for the same r ## Attributes {#ssec-stdenv-attributes} -### Variables affecting `stdenv` initialisation +### Variables affecting `stdenv` initialisation {#variables-affecting-stdenv-initialisation} #### `NIX_DEBUG` {#var-stdenv-NIX_DEBUG} A natural number indicating how much information to log. If set to 1 or higher, `stdenv` will print moderate debugging information during the build. In particular, the `gcc` and `ld` wrapper scripts will print out the complete command line passed to the wrapped tools. If set to 6 or higher, the `stdenv` setup script will be run with `set -x` tracing. If set to 7 or higher, the `gcc` and `ld` wrapper scripts will also be run with `set -x` tracing. -### Attributes affecting build properties +### Attributes affecting build properties {#attributes-affecting-build-properties} #### `enableParallelBuilding` {#var-stdenv-enableParallelBuilding} @@ -250,7 +251,7 @@ If set to `true`, `stdenv` will pass specific flags to `make` and other build to Unless set to `false`, some build systems with good support for parallel building including `cmake`, `meson`, and `qmake` will set it to `true`. -### Special variables +### Special variables {#special-variables} #### `passthru` {#var-stdenv-passthru} @@ -298,7 +299,7 @@ passthru.updateScript = [ ../../update.sh pname "--requested-release=unstable" ] The script will be run with `UPDATE_NIX_ATTR_PATH` environment variable set to the attribute path it is supposed to update. -::: note +::: {.note} The script will be usually run from the root of the Nixpkgs repository but you should not rely on that. Also note that the update scripts will be run in parallel by default; you should avoid running `git commit` or any other commands that cannot handle that. ::: @@ -314,7 +315,7 @@ Each phase can be overridden in its entirety either by setting the environment v There are a number of variables that control what phases are executed and in what order: -#### Variables affecting phase control +#### Variables affecting phase control {#variables-affecting-phase-control} ##### `phases` {#var-stdenv-phases} @@ -354,21 +355,22 @@ Additional phases executed after any of the default phases. The unpack phase is responsible for unpacking the source code of the package. The default implementation of `unpackPhase` unpacks the source files listed in the `src` environment variable to the current directory. It supports the following files by default: -#### Tar files +#### Tar files {#tar-files} These can optionally be compressed using `gzip` (`.tar.gz`, `.tgz` or `.tar.Z`), `bzip2` (`.tar.bz2`, `.tbz2` or `.tbz`) or `xz` (`.tar.xz`, `.tar.lzma` or `.txz`). -#### Zip files +#### Zip files {#zip-files} Zip files are unpacked using `unzip`. However, `unzip` is not in the standard environment, so you should add it to `nativeBuildInputs` yourself. -#### Directories in the Nix store +#### Directories in the Nix store {#directories-in-the-nix-store} These are simply copied to the current directory. The hash part of the file name is stripped, e.g. `/nix/store/1wydxgby13cz...-my-sources` would be copied to `my-sources`. Additional file types can be supported by setting the `unpackCmd` variable (see below). -#### Variables controlling the unpack phase +#### Variables controlling the unpack phase {#variables-controlling-the-unpack-phase} + ##### `srcs` / `src` {#var-stdenv-src} The list of source files or directories to be unpacked or copied. One of these must be set. @@ -405,7 +407,7 @@ The unpack phase evaluates the string `$unpackCmd` for any unrecognised file. Th The patch phase applies the list of patches defined in the `patches` variable. -#### Variables controlling the patch phase +#### Variables controlling the patch phase {#variables-controlling-the-patch-phase} ##### `dontPatch` {#var-stdenv-dontPatch} @@ -431,7 +433,7 @@ Hook executed at the end of the patch phase. The configure phase prepares the source tree for building. The default `configurePhase` runs `./configure` (typically an Autoconf-generated script) if it exists. -#### Variables controlling the configure phase +#### Variables controlling the configure phase {#variables-controlling-the-configure-phase} ##### `configureScript` {#var-stdenv-configureScript} @@ -461,6 +463,12 @@ The prefix under which the package must be installed, passed via the `--prefix` The key to use when specifying the prefix. By default, this is set to `--prefix=` as that is used by the majority of packages. +##### `dontAddStaticConfigureFlags` + +By default, when building statically, stdenv will try to add build system appropriate configure flags to try to enable static builds. + +If this is undesirable, set this variable to true. + ##### `dontAddDisableDepTrack` {#var-stdenv-dontAddDisableDepTrack} By default, the flag `--disable-dependency-tracking` is added to the configure flags to speed up Automake-based builds. If this is undesirable, set this variable to true. @@ -473,7 +481,7 @@ By default, the configure phase applies some special hackery to all files called By default, when the configure script has `--enable-static`, the option `--disable-static` is added to the configure flags. -If this is undesirable, set this variable to true. +If this is undesirable, set this variable to true. It is automatically set to true when building statically, for example through `pkgsStatic`. ##### `configurePlatforms` {#var-stdenv-configurePlatforms} @@ -491,7 +499,7 @@ Hook executed at the end of the configure phase. The build phase is responsible for actually building the package (e.g. compiling it). The default `buildPhase` simply calls `make` if a file named `Makefile`, `makefile` or `GNUmakefile` exists in the current directory (or the `makefile` is explicitly set); otherwise it does nothing. -#### Variables controlling the build phase +#### Variables controlling the build phase {#variables-controlling-the-build-phase} ##### `dontBuild` {#var-stdenv-dontBuild} @@ -509,7 +517,7 @@ A list of strings passed as additional flags to `make`. These flags are also use makeFlags = [ "PREFIX=$(out)" ]; ``` -::: note +::: {.note} The flags are quoted in bash, but environment variables can be specified by using the make syntax. ::: @@ -545,7 +553,7 @@ Before and after running `make`, the hooks `preBuild` and `postBuild` are called The check phase checks whether the package was built correctly by running its test suite. The default `checkPhase` calls `make check`, but only if the `doCheck` variable is enabled. -#### Variables controlling the check phase +#### Variables controlling the check phase {#variables-controlling-the-check-phase} ##### `doCheck` {#var-stdenv-doCheck} @@ -557,7 +565,7 @@ doCheck = true; in the derivation to enable checks. The exception is cross compilation. Cross compiled builds never run tests, no matter how `doCheck` is set, as the newly-built program won’t run on the platform used to build it. -##### `makeFlags` / `makeFlagsArray` / `makefile` +##### `makeFlags` / `makeFlagsArray` / `makefile` {#makeflags-makeflagsarray-makefile} See the [build phase](#var-stdenv-makeFlags) for details. @@ -585,13 +593,13 @@ Hook executed at the end of the check phase. The install phase is responsible for installing the package in the Nix store under `out`. The default `installPhase` creates the directory `$out` and calls `make install`. -#### Variables controlling the install phase +#### Variables controlling the install phase {#variables-controlling-the-install-phase} ##### `dontInstall` {#var-stdenv-dontInstall} Set to true to skip the install phase. -##### `makeFlags` / `makeFlagsArray` / `makefile` +##### `makeFlags` / `makeFlagsArray` / `makefile` {#makeflags-makeflagsarray-makefile-1} See the [build phase](#var-stdenv-makeFlags) for details. @@ -624,7 +632,7 @@ The fixup phase performs some (Nix-specific) post-processing actions on the file - On Linux, it applies the `patchelf` command to ELF executables and libraries to remove unused directories from the `RPATH` in order to prevent unnecessary runtime dependencies. - It rewrites the interpreter paths of shell scripts to paths found in `PATH`. E.g., `/usr/bin/perl` will be rewritten to `/nix/store/some-perl/bin/perl` found in `PATH`. -#### Variables controlling the fixup phase +#### Variables controlling the fixup phase {#variables-controlling-the-fixup-phase} ##### `dontFixup` {#var-stdenv-dontFixup} @@ -706,7 +714,7 @@ to `~/.gdbinit`. GDB will then be able to find debug information installed via ` The installCheck phase checks whether the package was installed correctly by running its test suite against the installed directories. The default `installCheck` calls `make installcheck`. -#### Variables controlling the installCheck phase +#### Variables controlling the installCheck phase {#variables-controlling-the-installcheck-phase} ##### `doInstallCheck` {#var-stdenv-doInstallCheck} @@ -742,7 +750,7 @@ Hook executed at the end of the installCheck phase. The distribution phase is intended to produce a source distribution of the package. The default `distPhase` first calls `make dist`, then it copies the resulting source tarballs to `$out/tarballs/`. This phase is only executed if the attribute `doDist` is set. -#### Variables controlling the distribution phase +#### Variables controlling the distribution phase {#variables-controlling-the-distribution-phase} ##### `distTarget` {#var-stdenv-distTarget} @@ -879,7 +887,7 @@ The most typical use of the setup hook is actually to add other hooks which are Packages adding a hook should not hard code a specific hook, but rather choose a variable *relative* to how they are included. Returning to the C compiler wrapper example, if the wrapper itself is an `n` dependency, then it only wants to accumulate flags from `n + 1` dependencies, as only those ones match the compiler’s target platform. The `hostOffset` variable is defined with the current dependency’s host offset `targetOffset` with its target offset, before its setup hook is sourced. Additionally, since most environment hooks don’t care about the target platform, that means the setup hook can append to the right bash array by doing something like -```{.bash} +```bash addEnvHooks "$hostOffset" myBashFunction ``` @@ -887,47 +895,47 @@ The *existence* of setups hooks has long been documented and packages inside Nix First, let’s cover some setup hooks that are part of Nixpkgs default stdenv. This means that they are run for every package built using `stdenv.mkDerivation`. Some of these are platform specific, so they may run on Linux but not Darwin or vice-versa. -### `move-docs.sh` +### `move-docs.sh` {#move-docs.sh} This setup hook moves any installed documentation to the `/share` subdirectory directory. This includes the man, doc and info directories. This is needed for legacy programs that do not know how to use the `share` subdirectory. -### `compress-man-pages.sh` +### `compress-man-pages.sh` {#compress-man-pages.sh} This setup hook compresses any man pages that have been installed. The compression is done using the gzip program. This helps to reduce the installed size of packages. -### `strip.sh` +### `strip.sh` {#strip.sh} This runs the strip command on installed binaries and libraries. This removes unnecessary information like debug symbols when they are not needed. This also helps to reduce the installed size of packages. -### `patch-shebangs.sh` +### `patch-shebangs.sh` {#patch-shebangs.sh} This setup hook patches installed scripts to use the full path to the shebang interpreter. A shebang interpreter is the first commented line of a script telling the operating system which program will run the script (e.g `#!/bin/bash`). In Nix, we want an exact path to that interpreter to be used. This often replaces `/bin/sh` with a path in the Nix store. -### `audit-tmpdir.sh` +### `audit-tmpdir.sh` {#audit-tmpdir.sh} This verifies that no references are left from the install binaries to the directory used to build those binaries. This ensures that the binaries do not need things outside the Nix store. This is currently supported in Linux only. -### `multiple-outputs.sh` +### `multiple-outputs.sh` {#multiple-outputs.sh} -This setup hook adds configure flags that tell packages to install files into any one of the proper outputs listed in `outputs`. This behavior can be turned off by setting `setOutputFlags` to false in the derivation environment. See for more information. +This setup hook adds configure flags that tell packages to install files into any one of the proper outputs listed in `outputs`. This behavior can be turned off by setting `setOutputFlags` to false in the derivation environment. See [](#chap-multiple-output) for more information. -### `move-sbin.sh` +### `move-sbin.sh` {#move-sbin.sh} This setup hook moves any binaries installed in the `sbin/` subdirectory into `bin/`. In addition, a link is provided from `sbin/` to `bin/` for compatibility. -### `move-lib64.sh` +### `move-lib64.sh` {#move-lib64.sh} This setup hook moves any libraries installed in the `lib64/` subdirectory into `lib/`. In addition, a link is provided from `lib64/` to `lib/` for compatibility. -### `move-systemd-user-units.sh` +### `move-systemd-user-units.sh` {#move-systemd-user-units.sh} This setup hook moves any systemd user units installed in the `lib/` subdirectory into `share/`. In addition, a link is provided from `share/` to `lib/` for compatibility. This is needed for systemd to find user services when installed into the user profile. -### `set-source-date-epoch-to-latest.sh` +### `set-source-date-epoch-to-latest.sh` {#set-source-date-epoch-to-latest.sh} This sets `SOURCE_DATE_EPOCH` to the modification time of the most recent file. -### Bintools Wrapper +### Bintools Wrapper {#bintools-wrapper} The Bintools Wrapper wraps the binary utilities for a bunch of miscellaneous purposes. These are GNU Binutils when targetting Linux, and a mix of cctools and GNU binutils for Darwin. \[The “Bintools” name is supposed to be a compromise between “Binutils” and “cctools” not denoting any specific implementation.\] Specifically, the underlying bintools package, and a C standard library (glibc or Darwin’s libSystem, just for the dynamic loader) are all fed in, and dependency finding, hardening (see below), and purity checks for each are handled by the Bintools Wrapper. Packages typically depend on CC Wrapper, which in turn (at run time) depends on the Bintools Wrapper. @@ -937,7 +945,7 @@ A final task of the setup hook is defining a number of standard environment vari A problem with this final task is that the Bintools Wrapper is honest and defines `LD` as `ld`. Most packages, however, firstly use the C compiler for linking, secondly use `LD` anyways, defining it as the C compiler, and thirdly, only so define `LD` when it is undefined as a fallback. This triple-threat means Bintools Wrapper will break those packages, as LD is already defined as the actual linker which the package won’t override yet doesn’t want to use. The workaround is to define, just for the problematic package, `LD` as the C compiler. A good way to do this would be `preConfigure = "LD=$CC"`. -### CC Wrapper +### CC Wrapper {#cc-wrapper} The CC Wrapper wraps a C toolchain for a bunch of miscellaneous purposes. Specifically, a C compiler (GCC or Clang), wrapped binary tools, and a C standard library (glibc or Darwin’s libSystem, just for the dynamic loader) are all fed in, and dependency finding, hardening (see below), and purity checks for each are handled by the CC Wrapper. Packages typically depend on the CC Wrapper, which in turn (at run-time) depends on the Bintools Wrapper. @@ -971,11 +979,11 @@ The `autoreconfHook` derivation adds `autoreconfPhase`, which runs autoreconf, l Adds every file named `catalog.xml` found under the `xml/dtd` and `xml/xsl` subdirectories of each build input to the `XML_CATALOG_FILES` environment variable. -### teTeX / TeX Live +### teTeX / TeX Live {#tetex-tex-live} Adds the `share/texmf-nix` subdirectory of each build input to the `TEXINPUTS` environment variable. -### Qt 4 +### Qt 4 {#qt-4} Sets the `QTDIR` environment variable to Qt’s path. @@ -983,13 +991,13 @@ Sets the `QTDIR` environment variable to Qt’s path. Exports `GDK_PIXBUF_MODULE_FILE` environment variable to the builder. Add librsvg package to `buildInputs` to get svg support. See also the [setup hook description in GNOME platform docs](#ssec-gnome-hooks-gdk-pixbuf). -### GHC +### GHC {#ghc} Creates a temporary package database and registers every Haskell build input in it (TODO: how?). -### GNOME platform +### GNOME platform {#gnome-platform} -Hooks related to GNOME platform and related libraries like GLib, GTK and GStreamer are described in . +Hooks related to GNOME platform and related libraries like GLib, GTK and GStreamer are described in [](#sec-language-gnome). ### autoPatchelfHook {#setup-hook-autopatchelfhook} @@ -1003,7 +1011,7 @@ By default `autoPatchelf` will fail as soon as any ELF file requires a dependenc The `autoPatchelf` command also recognizes a `--no-recurse` command line flag, which prevents it from recursing into subdirectories. -### breakpointHook +### breakpointHook {#breakpointhook} This hook will make a build pause instead of stopping when a failure happens. It prevents nix from cleaning up the build environment immediately and allows the user to attach to a build environment using the `cntr` command. Upon build error it will print instructions on how to use `cntr`, which can be used to enter the environment for debugging. Installing cntr and running the command will provide shell access to the build sandbox of failed build. At `/var/lib/cntr` the sandboxed filesystem is mounted. All commands and files of the system are still accessible within the shell. To execute commands from the sandbox use the cntr exec subcommand. `cntr` is only supported on Linux-based platforms. To use it first add `cntr` to your `environment.systemPackages` on NixOS or alternatively to the root user on non-NixOS systems. Then in the package that is supposed to be inspected, add `breakpointHook` to `nativeBuildInputs`. @@ -1013,15 +1021,15 @@ nativeBuildInputs = [ breakpointHook ]; When a build failure happens there will be an instruction printed that shows how to attach with `cntr` to the build sandbox. -::: note -::: title +::: {.note} +::: {.title} Caution with remote builds ::: This won’t work with remote builds as the build environment is on a different machine and can’t be accessed by `cntr`. Remote builds can be turned off by setting `--option builders ''` for `nix-build` or `--builders ''` for `nix build`. ::: -### installShellFiles +### installShellFiles {#installshellfiles} This hook helps with installing manpages and shell completion files. It exposes 2 shell functions `installManPage` and `installShellCompletion` that can be used from your `postInstall` hook. @@ -1047,61 +1055,61 @@ postInstall = '' ''; ``` -### libiconv, libintl +### libiconv, libintl {#libiconv-libintl} A few libraries automatically add to `NIX_LDFLAGS` their library, making their symbols automatically available to the linker. This includes libiconv and libintl (gettext). This is done to provide compatibility between GNU Linux, where libiconv and libintl are bundled in, and other systems where that might not be the case. Sometimes, this behavior is not desired. To disable this behavior, set `dontAddExtraLibs`. -### validatePkgConfig +### validatePkgConfig {#validatepkgconfig} The `validatePkgConfig` hook validates all pkg-config (`.pc`) files in a package. This helps catching some common errors in pkg-config files, such as undefined variables. -### cmake +### cmake {#cmake} Overrides the default configure phase to run the CMake command. By default, we use the Make generator of CMake. In addition, dependencies are added automatically to CMAKE_PREFIX_PATH so that packages are correctly detected by CMake. Some additional flags are passed in to give similar behavior to configure-based packages. You can disable this hook’s behavior by setting configurePhase to a custom value, or by setting dontUseCmakeConfigure. cmakeFlags controls flags passed only to CMake. By default, parallel building is enabled as CMake supports parallel building almost everywhere. When Ninja is also in use, CMake will detect that and use the ninja generator. -### xcbuildHook +### xcbuildHook {#xcbuildhook} Overrides the build and install phases to run the "xcbuild" command. This hook is needed when a project only comes with build files for the XCode build system. You can disable this behavior by setting buildPhase and configurePhase to a custom value. xcbuildFlags controls flags passed only to xcbuild. -### Meson +### Meson {#meson} Overrides the configure phase to run meson to generate Ninja files. To run these files, you should accompany Meson with ninja. By default, `enableParallelBuilding` is enabled as Meson supports parallel building almost everywhere. -#### Variables controlling Meson +#### Variables controlling Meson {#variables-controlling-meson} -##### `mesonFlags` +##### `mesonFlags` {#mesonflags} Controls the flags passed to meson. -##### `mesonBuildType` +##### `mesonBuildType` {#mesonbuildtype} Which [`--buildtype`](https://mesonbuild.com/Builtin-options.html#core-options) to pass to Meson. We default to `plain`. -##### `mesonAutoFeatures` +##### `mesonAutoFeatures` {#mesonautofeatures} What value to set [`-Dauto_features=`](https://mesonbuild.com/Builtin-options.html#core-options) to. We default to `enabled`. -##### `mesonWrapMode` +##### `mesonWrapMode` {#mesonwrapmode} What value to set [`-Dwrap_mode=`](https://mesonbuild.com/Builtin-options.html#core-options) to. We default to `nodownload` as we disallow network access. -##### `dontUseMesonConfigure` +##### `dontUseMesonConfigure` {#dontusemesonconfigure} Disables using Meson’s `configurePhase`. -### ninja +### ninja {#ninja} Overrides the build, install, and check phase to run ninja instead of make. You can disable this behavior with the `dontUseNinjaBuild`, `dontUseNinjaInstall`, and `dontUseNinjaCheck`, respectively. Parallel building is enabled by default in Ninja. -### unzip +### unzip {#unzip} This setup hook will allow you to unzip .zip files specified in `$src`. There are many similar packages like `unrar`, `undmg`, etc. -### wafHook +### wafHook {#wafhook} Overrides the configure, build, and install phases. This will run the “waf” script used by many projects. If `wafPath` (default `./waf`) doesn’t exist, it will copy the version of waf available in Nixpkgs. `wafFlags` can be used to pass flags to the waf script. -### scons +### scons {#scons} Overrides the build, install, and check phases. This uses the scons build system as a replacement for make. scons does not provide a configure phase, so everything is managed at build and install time. @@ -1119,7 +1127,7 @@ Both parameters take a list of flags as strings. The special `"all"` flag can be The following flags are enabled by default and might require disabling with `hardeningDisable` if the program to package is incompatible. -### `format` +### `format` {#format} Adds the `-Wformat -Wformat-security -Werror=format-security` compiler options. At present, this warns about calls to `printf` and `scanf` functions where the format string is not a string literal and there are no format arguments, as in `printf(foo);`. This may be a security hole if the format string came from untrusted input and contains `%n`. @@ -1132,7 +1140,7 @@ This needs to be turned off or fixed for errors similar to: cc1plus: some warnings being treated as errors ``` -### `stackprotector` +### `stackprotector` {#stackprotector} Adds the `-fstack-protector-strong --param ssp-buffer-size=4` compiler options. This adds safety checks against stack overwrites rendering many potential code injection attacks into aborting situations. In the best case this turns code injection vulnerabilities into denial of service or into non-issues (depending on the application). @@ -1143,7 +1151,7 @@ bin/blib.a(bios_console.o): In function `bios_handle_cup': /tmp/nix-build-ipxe-20141124-5cbdc41.drv-0/ipxe-5cbdc41/src/arch/i386/firmware/pcbios/bios_console.c:86: undefined reference to `__stack_chk_fail' ``` -### `fortify` +### `fortify` {#fortify} Adds the `-O2 -D_FORTIFY_SOURCE=2` compiler options. During code generation the compiler knows a great deal of information about buffer sizes (where possible), and attempts to replace insecure unlimited length buffer function calls with length-limited ones. This is especially useful for old, crufty code. Additionally, format strings in writable memory that contain `%n` are blocked. If an application depends on such a format string, it will need to be worked around. @@ -1164,7 +1172,7 @@ installwatch.c:3751:5: error: conflicting types for '__open_2' fcntl2.h:50:4: error: call to '__open_missing_mode' declared with attribute error: open with O_CREAT or O_TMPFILE in second argument needs 3 arguments ``` -### `pic` +### `pic` {#pic} Adds the `-fPIC` compiler options. This options adds support for position independent code in shared libraries and thus making ASLR possible. @@ -1177,19 +1185,19 @@ ccbLfRgg.s: Assembler messages: ccbLfRgg.s:33: Error: missing or invalid displacement expression `private_key_len@GOTOFF' ``` -### `strictoverflow` +### `strictoverflow` {#strictoverflow} Signed integer overflow is undefined behaviour according to the C standard. If it happens, it is an error in the program as it should check for overflow before it can happen, not afterwards. GCC provides built-in functions to perform arithmetic with overflow checking, which are correct and faster than any custom implementation. As a workaround, the option `-fno-strict-overflow` makes gcc behave as if signed integer overflows were defined. This flag should not trigger any build or runtime errors. -### `relro` +### `relro` {#relro} Adds the `-z relro` linker option. During program load, several ELF memory sections need to be written to by the linker, but can be turned read-only before turning over control to the program. This prevents some GOT (and .dtors) overwrite attacks, but at least the part of the GOT used by the dynamic linker (.got.plt) is still vulnerable. This flag can break dynamic shared object loading. For instance, the module systems of Xorg and OpenCV are incompatible with this flag. In almost all cases the `bindnow` flag must also be disabled and incompatible programs typically fail with similar errors at runtime. -### `bindnow` +### `bindnow` {#bindnow} Adds the `-z bindnow` linker option. During program load, all dynamic symbols are resolved, allowing for the complete GOT to be marked read-only (due to `relro`). This prevents GOT overwrite attacks. For very large applications, this can incur some performance loss during initial load while symbols are resolved, but this shouldn’t be an issue for daemons. @@ -1201,7 +1209,7 @@ intel_drv.so: undefined symbol: vgaHWFreeHWRec The following flags are disabled by default and should be enabled with `hardeningEnable` for packages that take untrusted input like network services. -### `pie` +### `pie` {#pie} Adds the `-fPIE` compiler and `-pie` linker options. Position Independent Executables are needed to take advantage of Address Space Layout Randomization, supported by modern kernel versions. While ASLR can already be enforced for data areas in the stack and heap (brk and mmap), the code areas must be compiled as position-independent. Shared libraries already do this with the `pic` flag, so they gain ASLR automatically, but binary .text regions need to be build with `pie` to gain ASLR. When this happens, ROP attacks are much harder since there are no static locations to bounce off of during a memory corruption attack. diff --git a/third_party/nixpkgs/doc/using/overlays.chapter.md b/third_party/nixpkgs/doc/using/overlays.chapter.md index 21efe467b8..037580583b 100644 --- a/third_party/nixpkgs/doc/using/overlays.chapter.md +++ b/third_party/nixpkgs/doc/using/overlays.chapter.md @@ -63,7 +63,7 @@ The second argument (`super`) corresponds to the result of the evaluation of the The value returned by this function should be a set similar to `pkgs/top-level/all-packages.nix`, containing overridden and/or new packages. -Overlays are similar to other methods for customizing Nixpkgs, in particular the `packageOverrides` attribute described in . Indeed, `packageOverrides` acts as an overlay with only the `super` argument. It is therefore appropriate for basic use, but overlays are more powerful and easier to distribute. +Overlays are similar to other methods for customizing Nixpkgs, in particular the `packageOverrides` attribute described in [](#sec-modify-via-packageOverrides). Indeed, `packageOverrides` acts as an overlay with only the `super` argument. It is therefore appropriate for basic use, but overlays are more powerful and easier to distribute. ## Using overlays to configure alternatives {#sec-overlays-alternatives} diff --git a/third_party/nixpkgs/doc/using/overrides.chapter.md b/third_party/nixpkgs/doc/using/overrides.chapter.md index c1ab710e06..66e5103531 100644 --- a/third_party/nixpkgs/doc/using/overrides.chapter.md +++ b/third_party/nixpkgs/doc/using/overrides.chapter.md @@ -48,17 +48,17 @@ In the above example, the `separateDebugInfo` attribute is overridden to be true The argument `oldAttrs` is conventionally used to refer to the attr set originally passed to `stdenv.mkDerivation`. -::: note -Note that `separateDebugInfo` is processed only by the `stdenv.mkDerivation` function, not the generated, raw Nix derivation. Thus, using `overrideDerivation` will not work in this case, as it overrides only the attributes of the final derivation. It is for this reason that `overrideAttrs` should be preferred in (almost) all cases to `overrideDerivation`, i.e. to allow using `stdenv.mkDerivation` to process input arguments, as well as the fact that it is easier to use (you can use the same attribute names you see in your Nix code, instead of the ones generated (e.g. `buildInputs` vs `nativeBuildInputs`), and it involves less typing). +::: {.note} +Note that `separateDebugInfo` is processed only by the `stdenv.mkDerivation` function, not the generated, raw Nix derivation. Thus, using `overrideDerivation` will not work in this case, as it overrides only the attributes of the final derivation. It is for this reason that `overrideAttrs` should be preferred in (almost) all cases to `overrideDerivation`, i.e. to allow using `stdenv.mkDerivation` to process input arguments, as well as the fact that it is easier to use (you can use the same attribute names you see in your Nix code, instead of the ones generated (e.g. `buildInputs` vs `nativeBuildInputs`), and it involves less typing). ::: ## <pkg>.overrideDerivation {#sec-pkg-overrideDerivation} -::: warning +::: {.warning} You should prefer `overrideAttrs` in almost all cases, see its documentation for the reasons why. `overrideDerivation` is not deprecated and will continue to work, but is less nice to use and does not have as many abilities as `overrideAttrs`. ::: -::: warning +::: {.warning} Do not use this function in Nixpkgs as it evaluates a Derivation before modifying it, which breaks package abstraction and removes error-checking of function arguments. In addition, this evaluation-per-function application incurs a performance penalty, which can become a problem if many overrides are used. It is only intended for ad-hoc customisation, such as in `~/.config/nixpkgs/config.nix`. ::: @@ -81,8 +81,8 @@ In the above example, the `name`, `src`, and `patches` of the derivation will be The argument `oldAttrs` is used to refer to the attribute set of the original derivation. -::: note -A package's attributes are evaluated *before* being modified by the `overrideDerivation` function. For example, the `name` attribute reference in `url = "mirror://gnu/hello/${name}.tar.gz";` is filled-in *before* the `overrideDerivation` function modifies the attribute set. This means that overriding the `name` attribute, in this example, *will not* change the value of the `url` attribute. Instead, we need to override both the `name` *and* `url` attributes. +::: {.note} +A package's attributes are evaluated *before* being modified by the `overrideDerivation` function. For example, the `name` attribute reference in `url = "mirror://gnu/hello/${name}.tar.gz";` is filled-in *before* the `overrideDerivation` function modifies the attribute set. This means that overriding the `name` attribute, in this example, *will not* change the value of the `url` attribute. Instead, we need to override both the `name` *and* `url` attributes. ::: ## lib.makeOverridable {#sec-lib-makeOverridable} diff --git a/third_party/nixpkgs/lib/default.nix b/third_party/nixpkgs/lib/default.nix index ccae0bbc3a..ccfee2ebe3 100644 --- a/third_party/nixpkgs/lib/default.nix +++ b/third_party/nixpkgs/lib/default.nix @@ -115,8 +115,8 @@ let mergeModules' mergeOptionDecls evalOptionValue mergeDefinitions pushDownProperties dischargeProperties filterOverrides sortProperties fixupOptionType mkIf mkAssert mkMerge mkOverride - mkOptionDefault mkDefault mkForce mkVMOverride mkStrict - mkFixStrictness mkOrder mkBefore mkAfter mkAliasDefinitions + mkOptionDefault mkDefault mkForce mkVMOverride + mkOrder mkBefore mkAfter mkAliasDefinitions mkAliasAndWrapDefinitions fixMergeModules mkRemovedOptionModule mkRenamedOptionModule mkMergedOptionModule mkChangedOptionModule mkAliasOptionModule doRename; diff --git a/third_party/nixpkgs/lib/licenses.nix b/third_party/nixpkgs/lib/licenses.nix index 9baaba022b..4792f1cb59 100644 --- a/third_party/nixpkgs/lib/licenses.nix +++ b/third_party/nixpkgs/lib/licenses.nix @@ -346,6 +346,11 @@ lib.mapAttrs (n: v: v // { shortName = n; }) ({ fullName = "Unspecified free software license"; }; + ftl = spdx { + spdxId = "FTL"; + fullName = "Freetype Project License"; + }; + g4sl = { fullName = "Geant4 Software License"; url = "https://geant4.web.cern.ch/geant4/license/LICENSE.html"; @@ -737,7 +742,7 @@ lib.mapAttrs (n: v: v // { shortName = n; }) ({ stk = { shortName = "stk"; fullName = "Synthesis Tool Kit 4.3"; - url = https://github.com/thestk/stk/blob/master/LICENSE; + url = "https://github.com/thestk/stk/blob/master/LICENSE"; }; tcltk = spdx { diff --git a/third_party/nixpkgs/lib/modules.nix b/third_party/nixpkgs/lib/modules.nix index 99b9a8a31e..58c6cda58e 100644 --- a/third_party/nixpkgs/lib/modules.nix +++ b/third_party/nixpkgs/lib/modules.nix @@ -713,10 +713,6 @@ rec { mkForce = mkOverride 50; mkVMOverride = mkOverride 10; # used by ‘nixos-rebuild build-vm’ - mkStrict = builtins.trace "`mkStrict' is obsolete; use `mkOverride 0' instead." (mkOverride 0); - - mkFixStrictness = id; # obsolete, no-op - mkOrder = priority: content: { _type = "order"; inherit priority content; diff --git a/third_party/nixpkgs/lib/sources.nix b/third_party/nixpkgs/lib/sources.nix index 1a821f5505..407829b547 100644 --- a/third_party/nixpkgs/lib/sources.nix +++ b/third_party/nixpkgs/lib/sources.nix @@ -1,6 +1,7 @@ # Functions for copying sources to the Nix store. { lib }: +# Tested in lib/tests/sources.sh let inherit (builtins) hasContext @@ -11,14 +12,13 @@ let tryEval ; inherit (lib) + boolToString filter getAttr isString pathExists readFile ; -in -rec { # Returns the type of a path: regular (for file), symlink, or directory pathType = p: getAttr (baseNameOf p) (readDir (dirOf p)); @@ -84,18 +84,36 @@ rec { # cleanSourceWith = { filter ? _path: _type: true, src, name ? null }: let - isFiltered = src ? _isLibCleanSourceWith; - origSrc = if isFiltered then src.origSrc else src; - filter' = if isFiltered then name: type: filter name type && src.filter name type else filter; - name' = if name != null then name else if isFiltered then src.name else "source"; - in { - inherit origSrc; - filter = filter'; - outPath = builtins.path { filter = filter'; path = origSrc; name = name'; }; - _isLibCleanSourceWith = true; - name = name'; + orig = toSourceAttributes src; + in fromSourceAttributes { + inherit (orig) origSrc; + filter = path: type: filter path type && orig.filter path type; + name = if name != null then name else orig.name; }; + /* + Add logging to a source, for troubleshooting the filtering behavior. + Type: + sources.trace :: sourceLike -> Source + */ + trace = + # Source to debug. The returned source will behave like this source, but also log its filter invocations. + src: + let + attrs = toSourceAttributes src; + in + fromSourceAttributes ( + attrs // { + filter = path: type: + let + r = attrs.filter path type; + in + builtins.trace "${attrs.name}.filter ${path} = ${boolToString r}" r; + } + ) // { + satisfiesSubpathInvariant = src ? satisfiesSubpathInvariant && src.satisfiesSubpathInvariant; + }; + # Filter sources by a list of regular expressions. # # E.g. `src = sourceByRegex ./my-subproject [".*\.py$" "^database.sql$"]` @@ -110,14 +128,26 @@ rec { inherit src; }; - # Get all files ending with the specified suffices from the given - # directory or its descendants. E.g. `sourceFilesBySuffices ./dir - # [".xml" ".c"]'. - sourceFilesBySuffices = path: exts: + /* + Get all files ending with the specified suffices from the given + source directory or its descendants, omitting files that do not match + any suffix. The result of the example below will include files like + `./dir/module.c` and `./dir/subdir/doc.xml` if present. + + Type: sourceLike -> [String] -> Source + + Example: + sourceFilesBySuffices ./. [ ".xml" ".c" ] + */ + sourceFilesBySuffices = + # Path or source containing the files to be returned + src: + # A list of file suffix strings + exts: let filter = name: type: let base = baseNameOf (toString name); in type == "directory" || lib.any (ext: lib.hasSuffix ext base) exts; - in cleanSourceWith { inherit filter; src = path; }; + in cleanSourceWith { inherit filter src; }; pathIsGitRepo = path: (tryEval (commitIdFromGitRepo path)).success; @@ -177,4 +207,57 @@ rec { pathHasContext = builtins.hasContext or (lib.hasPrefix storeDir); canCleanSource = src: src ? _isLibCleanSourceWith || !(pathHasContext (toString src)); + + # -------------------------------------------------------------------------- # + # Internal functions + # + + # toSourceAttributes : sourceLike -> SourceAttrs + # + # Convert any source-like object into a simple, singular representation. + # We don't expose this representation in order to avoid having a fifth path- + # like class of objects in the wild. + # (Existing ones being: paths, strings, sources and x//{outPath}) + # So instead of exposing internals, we build a library of combinator functions. + toSourceAttributes = src: + let + isFiltered = src ? _isLibCleanSourceWith; + in + { + # The original path + origSrc = if isFiltered then src.origSrc else src; + filter = if isFiltered then src.filter else _: _: true; + name = if isFiltered then src.name else "source"; + }; + + # fromSourceAttributes : SourceAttrs -> Source + # + # Inverse of toSourceAttributes for Source objects. + fromSourceAttributes = { origSrc, filter, name }: + { + _isLibCleanSourceWith = true; + inherit origSrc filter name; + outPath = builtins.path { inherit filter name; path = origSrc; }; + }; + +in { + inherit + pathType + pathIsDirectory + pathIsRegularFile + + pathIsGitRepo + commitIdFromGitRepo + + cleanSource + cleanSourceWith + cleanSourceFilter + pathHasContext + canCleanSource + + sourceByRegex + sourceFilesBySuffices + + trace + ; } diff --git a/third_party/nixpkgs/lib/systems/doubles.nix b/third_party/nixpkgs/lib/systems/doubles.nix index c6d90ba985..61ba7dad7c 100644 --- a/third_party/nixpkgs/lib/systems/doubles.nix +++ b/third_party/nixpkgs/lib/systems/doubles.nix @@ -96,5 +96,5 @@ in { embedded = filterDoubles predicates.isNone; - mesaPlatforms = ["i686-linux" "x86_64-linux" "x86_64-darwin" "armv5tel-linux" "armv6l-linux" "armv7l-linux" "armv7a-linux" "aarch64-linux" "powerpc64-linux" "powerpc64le-linux" "aarch64-darwin"]; + mesaPlatforms = ["i686-linux" "x86_64-linux" "x86_64-darwin" "armv5tel-linux" "armv6l-linux" "armv7l-linux" "armv7a-linux" "aarch64-linux" "powerpc64-linux" "powerpc64le-linux" "aarch64-darwin" "riscv64-linux"]; } diff --git a/third_party/nixpkgs/lib/systems/parse.nix b/third_party/nixpkgs/lib/systems/parse.nix index accaeb652d..2b789fd8ec 100644 --- a/third_party/nixpkgs/lib/systems/parse.nix +++ b/third_party/nixpkgs/lib/systems/parse.nix @@ -121,6 +121,14 @@ rec { js = { bits = 32; significantByte = littleEndian; family = "js"; }; }; + # GNU build systems assume that older NetBSD architectures are using a.out. + gnuNetBSDDefaultExecFormat = cpu: + if (cpu.family == "x86" && cpu.bits == 32) || + (cpu.family == "arm" && cpu.bits == 32) || + (cpu.family == "sparc" && cpu.bits == 32) + then execFormats.aout + else execFormats.elf; + # Determine when two CPUs are compatible with each other. That is, # can code built for system B run on system A? For that to happen, # the programs that system B accepts must be a subset of the @@ -276,7 +284,7 @@ rec { kernels = with execFormats; with kernelFamilies; setTypes types.openKernel { # TODO(@Ericson2314): Don't want to mass-rebuild yet to keeping 'darwin' as - # the nnormalized name for macOS. + # the normalized name for macOS. macos = { execFormat = macho; families = { inherit darwin; }; name = "darwin"; }; ios = { execFormat = macho; families = { inherit darwin; }; }; freebsd = { execFormat = elf; families = { inherit bsd; }; }; @@ -463,8 +471,12 @@ rec { else "${cpu.name}-${kernel.name}"; tripleFromSystem = { cpu, vendor, kernel, abi, ... } @ sys: assert isSystem sys; let + optExecFormat = + lib.optionalString (kernel.name == "netbsd" && + gnuNetBSDDefaultExecFormat cpu != kernel.execFormat) + kernel.execFormat.name; optAbi = lib.optionalString (abi != abis.unknown) "-${abi.name}"; - in "${cpu.name}-${vendor.name}-${kernel.name}${optAbi}"; + in "${cpu.name}-${vendor.name}-${kernel.name}${optExecFormat}${optAbi}"; ################################################################################ diff --git a/third_party/nixpkgs/lib/tests/release.nix b/third_party/nixpkgs/lib/tests/release.nix index 800d8a65c1..c3b05251f7 100644 --- a/third_party/nixpkgs/lib/tests/release.nix +++ b/third_party/nixpkgs/lib/tests/release.nix @@ -26,7 +26,11 @@ pkgs.runCommandNoCC "nixpkgs-lib-tests" { nix-store --init cp -r ${../.} lib + echo "Running lib/tests/modules.sh" bash lib/tests/modules.sh + echo "Running lib/tests/sources.sh" + TEST_LIB=$PWD/lib bash lib/tests/sources.sh + touch $out '' diff --git a/third_party/nixpkgs/lib/tests/sources.sh b/third_party/nixpkgs/lib/tests/sources.sh new file mode 100755 index 0000000000..71fee719cb --- /dev/null +++ b/third_party/nixpkgs/lib/tests/sources.sh @@ -0,0 +1,59 @@ +#!/usr/bin/env bash +set -euo pipefail + +# Use +# || die +die() { + echo >&2 "test case failed: " "$@" + exit 1 +} + +if test -n "${TEST_LIB:-}"; then + export NIX_PATH=nixpkgs="$(dirname "$TEST_LIB")" +else + export NIX_PATH=nixpkgs="$(cd $(dirname ${BASH_SOURCE[0]})/../..; pwd)" +fi + +work="$(mktemp -d)" +clean_up() { + rm -rf "$work" +} +trap clean_up EXIT +cd $work + +touch {README.md,module.o,foo.bar} + +# nix-instantiate doesn't write out the source, only computing the hash, so +# this uses the experimental nix command instead. + +dir="$(nix eval --raw '(with import ; "${ + cleanSource ./. +}")')" +(cd $dir; find) | sort -f | diff -U10 - <(cat <&2 tests ok diff --git a/third_party/nixpkgs/maintainers/maintainer-list.nix b/third_party/nixpkgs/maintainers/maintainer-list.nix index 2448ad3f93..7a5c9fcbd7 100644 --- a/third_party/nixpkgs/maintainers/maintainer-list.nix +++ b/third_party/nixpkgs/maintainers/maintainer-list.nix @@ -318,6 +318,12 @@ githubId = 4296804; name = "Alex Franchuk"; }; + agbrooks = { + email = "andrewgrantbrooks@gmail.com"; + github = "agbrooks"; + githubId = 19290901; + name = "Andrew Brooks"; + }; aherrmann = { email = "andreash87@gmx.ch"; github = "aherrmann"; @@ -684,6 +690,12 @@ fingerprint = "AA4B 8EC3 F971 D350 482E 4E20 0299 AFF9 ECBB 5169"; }]; }; + anhduy = { + email = "vo@anhduy.io"; + github = "voanhduy1512"; + githubId = 1771266; + name = "Vo Anh Duy"; + }; ankhers = { email = "me@ankhers.dev"; github = "ankhers"; @@ -758,7 +770,7 @@ keys = [{ longkeyid = "rsa4096/0xAAA50652F0479205"; fingerprint = "BF8B F725 DA30 E53E 7F11 4ED8 AAA5 0652 F047 9205"; - }]; + }]; }; ar1a = { email = "aria@ar1as.space"; @@ -790,6 +802,12 @@ githubId = 718812; name = "Antoine R. Dumont"; }; + arezvov = { + email = "alex@rezvov.ru"; + github = "arezvov"; + githubId = 58516559; + name = "Alexander Rezvov"; + }; arianvp = { email = "arian.vanputten@gmail.com"; github = "arianvp"; @@ -896,6 +914,12 @@ githubId = 869771; name = "Kirill Boltaev"; }; + ashley = { + email = "personavinny@protonmail.com"; + github = "paranoidcat"; + githubId = 84152630; + name = "Ashley Chiara"; + }; asppsa = { email = "asppsa@gmail.com"; github = "asppsa"; @@ -1044,7 +1068,11 @@ email = "babathriviere@gmail.com"; github = "babariviere"; githubId = 12128029; - name = "babariviere"; + name = "Bastien Rivière"; + keys = [{ + longkeyid = "rsa4096/0xF202AD3B6EDF4BD1"; + fingerprint = "2F85 B362 B274 0012 37E2 81EE F202 AD3B 6EDF 4BD1"; + }]; }; babbaj = { name = "babbaj"; @@ -1184,6 +1212,12 @@ github = "beardhatcode"; githubId = 662538; }; + beezow = { + name = "beezow"; + email = "zbeezow@gmail.com"; + github = "beezow"; + githubId = 42082156; + }; bendlas = { email = "herwig@bendlas.net"; github = "bendlas"; @@ -1202,6 +1236,16 @@ github = "benneti"; githubId = 11725645; }; + bertof = { + name = "Filippo Berto"; + email = "berto.f@protonmail.com"; + github = "bertof"; + githubId = 9915675; + keys = [{ + longkeyid = "rsa4096/0xFE98AE5EC52B1056"; + fingerprint = "17C5 1EF9 C0FE 2EB2 FE56 BB53 FE98 AE5E C52B 1056"; + }]; + }; bennofs = { email = "benno.fuenfstueck@gmail.com"; github = "bennofs"; @@ -1865,6 +1909,12 @@ githubId = 2131991; name = "Elmo Todurov"; }; + cjab = { + email = "chad+nixpkgs@jablonski.xyz"; + github = "cjab"; + githubId = 136485; + name = "Chad Jablonski"; + }; ck3d = { email = "ck3d@gmx.de"; github = "ck3d"; @@ -1907,6 +1957,16 @@ githubId = 3392199; name = "Calum MacRae"; }; + cmars = { + email = "nix@cmars.tech"; + github = "cmars"; + githubId = 23741; + name = "Casey Marshall"; + keys = [{ + longkeyid = "rsa3072/0x6DEC2758ACD5A973"; + fingerprint = "6B78 7E5F B493 FA4F D009 5D10 6DEC 2758 ACD5 A973"; + }]; + }; cmcdragonkai = { email = "roger.qiu@matrix.ai"; github = "cmcdragonkai"; @@ -2235,6 +2295,12 @@ githubId = 1298344; name = "Daniel Fullmer"; }; + dan4ik605743 = { + email = "6057430gu@gmail.com"; + github = "dan4ik605743"; + githubId = 86075850; + name = "Danil Danevich"; + }; das-g = { email = "nixpkgs@raphael.dasgupta.ch"; github = "das-g"; @@ -2353,6 +2419,16 @@ githubId = 75067; name = "Daniel Duan"; }; + dearrude = { + name = "Ebrahim Nejati"; + email = "dearrude@tfwno.gf"; + github = "dearrude"; + githubId = 30749142; + keys = [{ + longkeyid = "rsa4096/19151E03BF2CF012"; + fingerprint = "4E35 F2E5 2132 D654 E815 A672 DB2C BC24 2868 6000"; + }]; + }; deepfire = { email = "_deepfire@feelingofgreen.ru"; github = "deepfire"; @@ -2365,6 +2441,12 @@ github = "delan"; githubId = 465303; }; + deliciouslytyped = { + email = "47436522+deliciouslytyped@users.noreply.github.com"; + github = "deliciouslytyped"; + githubId = 47436522; + name = "deliciouslytyped"; + }; delroth = { email = "delroth@gmail.com"; github = "delroth"; @@ -2479,6 +2561,12 @@ githubId = 8404455; name = "Diego Lelis"; }; + diffumist = { + email = "diffumist@gmail.com"; + github = "diffumist"; + githubId = 32810399; + name = "Diffumist"; + }; diogox = { name = "Diogo Xavier"; email = "13244408+diogox@users.noreply.github.com"; @@ -2677,6 +2765,16 @@ githubId = 10198051; name = "Drew Risinger"; }; + drupol = { + name = "Pol Dellaiera"; + email = "pol.dellaiera@protonmail.com"; + github = "drupol"; + githubId = 252042; + keys = [{ + longkeyid = "ed25519/0x0AAF2901E8040715"; + fingerprint = "85F3 72DF 4AF3 EF13 ED34 72A3 0AAF 2901 E804 0715"; + }]; + }; dschrempf = { name = "Dominik Schrempf"; email = "dominik.schrempf@gmail.com"; @@ -3701,6 +3799,16 @@ githubId = 1176131; name = "George Whewell"; }; + georgyo = { + email = "george@shamm.as"; + github = "georgyo"; + githubId = 19374; + name = "George Shammas"; + keys = [{ + longkeyid = "rsa4096/0x82BB70D541AE2DB4"; + fingerprint = "D0CF 440A A703 E0F9 73CB A078 82BB 70D5 41AE 2DB4"; + }]; + }; gerschtli = { email = "tobias.happ@gmx.de"; github = "Gerschtli"; @@ -3953,6 +4061,12 @@ githubId = 1742172; name = "Hamish Hutchings"; }; + hanemile = { + email = "mail@emile.space"; + github = "hanemile"; + githubId = 22756350; + name = "Emile Hansmaennel"; + }; hansjoergschurr = { email = "commits@schurr.at"; github = "hansjoergschurr"; @@ -4177,6 +4291,12 @@ githubId = 1436960; name = "Christoph Hrdinka"; }; + hrhino = { + email = "hora.rhino@gmail.com"; + github = "hrhino"; + githubId = 28076058; + name = "Harrison Houghton"; + }; hschaeidt = { email = "he.schaeidt@gmail.com"; github = "hschaeidt"; @@ -4255,6 +4375,12 @@ githubId = 3661115; name = "Ingo Blechschmidt"; }; + icy-thought = { + name = "Icy-Thought"; + email = "gilganyx@pm.me"; + github = "Icy-Thought"; + githubId = 53710398; + }; idontgetoutmuch = { email = "dominic@steinitz.org"; github = "idontgetoutmuch"; @@ -4603,12 +4729,6 @@ githubId = 1982341; name = "Jack Cummings"; }; - jD91mZM2 = { - email = "me@krake.one"; - github = "jD91mZM2"; - githubId = 12830969; - name = "jD91mZM2"; - }; jdagilliland = { email = "jdagilliland@gmail.com"; github = "jdagilliland"; @@ -4815,6 +4935,12 @@ githubId = 587870; name = "Jonathan Mettes"; }; + jo1gi = { + email = "joakimholm@protonmail.com"; + github = "jo1gi"; + githubId = 26695750; + name = "Joakim Holm"; + }; joachifm = { email = "joachifm@fastmail.fm"; github = "joachifm"; @@ -5124,6 +5250,12 @@ email = "jwilberding@afiniate.com"; name = "Jordan Wilberding"; }; + jwoudenberg = { + email = "nixpkgs@jasperwoudenberg.com"; + github = "jwoudenberg"; + githubId = 1525551; + name = "Jasper Woudenberg"; + }; jwygoda = { email = "jaroslaw@wygoda.me"; github = "jwygoda"; @@ -5271,7 +5403,7 @@ github = "kho-dialga"; githubId = 55767703; name = "Iván Brito"; - }; + }; khumba = { email = "bog@khumba.net"; github = "khumba"; @@ -5593,6 +5725,16 @@ githubId = 72546287; name = "L3af"; }; + lach = { + email = "iam@lach.pw"; + github = "CertainLach"; + githubId = 6235312; + keys = [{ + longkeyid = "rsa3072/40B5D6948143175F"; + fingerprint = "323C 95B5 DBF7 2D74 8570 C0B7 40B5 D694 8143 175F"; + }]; + name = "Yaroslav Bolyukin"; + }; laikq = { email = "gwen@quasebarth.de"; github = "laikq"; @@ -5966,8 +6108,8 @@ githubId = 7243783; name = "Bernardo Meurer"; keys = [{ - longkeyid = "rsa4096/0xF4C0D53B8D14C246"; - fingerprint = "F193 7596 57D5 6DA4 CCD4 786B F4C0 D53B 8D14 C246"; + longkeyid = "rsa4096/0xF4C0D53B8D14C246"; + fingerprint = "F193 7596 57D5 6DA4 CCD4 786B F4C0 D53B 8D14 C246"; }]; }; lowfatcomputing = { @@ -6140,6 +6282,12 @@ githubId = 36235154; name = "Sean Haugh"; }; + maaslalani = { + email = "maaslalani0@gmail.com"; + github = "maaslalani"; + githubId = 42545625; + name = "Maas Lalani"; + }; madjar = { email = "georges.dubus@compiletoi.net"; github = "madjar"; @@ -6194,6 +6342,12 @@ githubId = 34393802; name = "Malte Voos"; }; + malbarbo = { + email = "malbarbo@gmail.com"; + github = "malbarbo"; + githubId = 1678126; + name = "Marco A L Barbosa"; + }; malyn = { email = "malyn@strangeGizmo.com"; github = "malyn"; @@ -6400,12 +6554,6 @@ githubId = 2649304; name = "M. Baeten"; }; - mbakke = { - email = "mbakke@fastmail.com"; - github = "mbakke"; - githubId = 1269099; - name = "Marius Bakke"; - }; mbaillie = { email = "martin@baillie.id"; github = "martinbaillie"; @@ -6461,10 +6609,14 @@ name = "Matthias C. M. Troffaes"; }; McSinyx = { - email = "vn.mcsinyx@gmail.com"; + email = "mcsinyx@disroot.org"; github = "McSinyx"; githubId = 13689192; name = "Nguyễn Gia Phong"; + keys = [{ + longkeyid = "rsa3072/0x27148B2C06A2224B"; + fingerprint = "E90E 11B8 0493 343B 6132 E394 2714 8B2C 06A2 224B"; + }]; }; mcwitt = { email = "mcwitt@gmail.com"; @@ -7185,12 +7337,28 @@ githubId = 818502; name = "Nathan Yong"; }; + natto1784 = { + email = "natto@weirdnatto.in"; + github = "natto1784"; + githubId = 56316606; + name = "Amneesh Singh"; + }; nbren12 = { email = "nbren12@gmail.com"; github = "nbren12"; githubId = 1386642; name = "Noah Brenowitz"; }; + ncfavier = { + email = "n@monade.li"; + github = "ncfavier"; + githubId = 4323933; + name = "Naïm Favier"; + keys = [{ + longkeyid = "rsa2048/0x49B07322580B7EE2"; + fingerprint = "51A0 705E 7DD2 3CBC 5EAA B43E 49B0 7322 580B 7EE2"; + }]; + }; nckx = { email = "github@tobias.gr"; github = "nckx"; @@ -7221,6 +7389,11 @@ githubId = 628342; name = "Tim Steinbach"; }; + nessdoor = { + name = "Tomas Antonio Lopez"; + email = "entropy.overseer@protonmail.com"; + githubId = 25993494; + }; netcrns = { email = "jason.wing@gmx.de"; github = "netcrns"; @@ -7239,6 +7412,12 @@ githubId = 17120571; name = "Xinhao Luo"; }; + newam = { + email = "alexmgit@protonmail.com"; + github = "newAM"; + githubId = 7845120; + name = "Alex M."; + }; nikitavoloboev = { email = "nikita.voloboev@gmail.com"; github = "nikitavoloboev"; @@ -7941,6 +8120,12 @@ githubId = 1640697; name = "Philipp Hausmann"; }; + Philipp-M = { + email = "philipp@mildenberger.me"; + github = "Philipp-M"; + githubId = 9267430; + name = "Philipp Mildenberger"; + }; Phlogistique = { email = "noe.rubinstein@gmail.com"; github = "Phlogistique"; @@ -8139,6 +8324,12 @@ githubId = 1829032; name = "Paul Hendry"; }; + polygon = { + email = "polygon@wh2.tu-dresden.de"; + name = "Polygon"; + github = "polygon"; + githubId = 51489; + }; polyrod = { email = "dc1mdp@gmail.com"; github = "polyrod"; @@ -8156,12 +8347,10 @@ github = "poscat0x04"; githubId = 53291983; name = "Poscat Tarski"; - keys = [ - { - longkeyid = "rsa4096/2D2595A00D08ACE0"; - fingerprint = "48AD DE10 F27B AFB4 7BB0 CCAF 2D25 95A0 0D08 ACE0"; - } - ]; + keys = [{ + longkeyid = "rsa4096/2D2595A00D08ACE0"; + fingerprint = "48AD DE10 F27B AFB4 7BB0 CCAF 2D25 95A0 0D08 ACE0"; + }]; }; pradeepchhetri = { email = "pradeep.chhetri89@gmail.com"; @@ -8589,6 +8778,12 @@ githubId = 6047658; name = "Ryan Horiguchi"; }; + ribose-jeffreylau = { + name = "Jeffrey Lau"; + email = "jeffrey.lau@ribose.com"; + github = "ribose-jeffreylau"; + githubId = 2649467; + }; richardipsum = { email = "richardipsum@fastmail.co.uk"; github = "richardipsum"; @@ -8973,6 +9168,16 @@ githubId = 3280280; name = "Ryne Everett"; }; + rytone = { + email = "max@ryt.one"; + github = "rytone"; + githubId = 8082305; + name = "Maxwell Beck"; + keys = [{ + longkeyid = "rsa2048/0xBB3EFA303760A0DB"; + fingerprint = "D260 79E3 C2BC 2E43 905B D057 BB3E FA30 3760 A0DB"; + }]; + }; rzetterberg = { email = "richard.zetterberg@gmail.com"; github = "rzetterberg"; @@ -9247,6 +9452,16 @@ fingerprint = "A317 37B3 693C 921B 480C C629 4A2A AAA3 82F8 294C"; }]; }; + seylerius = { + name = "Sable Seyler"; + email = "sable@seyleri.us"; + github = "seylerius"; + githubId = 1145981; + keys = [{ + longkeyid = "rsa4096/0xDC26B921A9E9DBDE"; + fingerprint = "7246 B6E1 ABB9 9A48 4395 FD11 DC26 B921 A9E9 DBDE"; + }]; + }; sfrijters = { email = "sfrijters@gmail.com"; github = "sfrijters"; @@ -9772,10 +9987,16 @@ name = "Felix Bühler"; }; stupremee = { - email = "jutus.k@protonmail.com"; - github = "Stupremee"; - githubId = 39732259; - name = "Justus K"; + email = "jutus.k@protonmail.com"; + github = "Stupremee"; + githubId = 39732259; + name = "Justus K"; + }; + SubhrajyotiSen = { + email = "subhrajyoti12@gmail.com"; + github = "SubhrajyotiSen"; + githubId = 12984845; + name = "Subhrajyoti Sen"; }; suhr = { email = "suhr@i2pmail.org"; @@ -10579,6 +10800,12 @@ githubId = 33242106; name = "Uri Baghin"; }; + urlordjames = { + email = "urlordjames@gmail.com"; + github = "urlordjames"; + githubId = 32751441; + name = "urlordjames"; + }; uskudnik = { email = "urban.skudnik@gmail.com"; github = "uskudnik"; @@ -10887,6 +11114,16 @@ githubId = 3889405; name = "vyp"; }; + wakira = { + name = "Sheng Wang"; + email = "sheng@a64.work"; + github = "wakira"; + githubId = 2338339; + keys = [{ + longkeyid = "rsa4096/0x8C9B0A8FC0C0D862"; + fingerprint = "47F7 009E 3AE3 1DA7 988E 12E1 8C9B 0A8F C0C0 D862"; + }]; + }; wamserma = { name = "Markus S. Wamser"; email = "github-dev@mail2013.wamser.eu"; @@ -11261,6 +11498,12 @@ fingerprint = "85F8 E850 F8F2 F823 F934 535B EC50 6589 9AEA AF4C"; }]; }; + yuka = { + email = "yuka@yuka.dev"; + github = "yu-re-ka"; + githubId = 86169957; + name = "Yureka"; + }; yusdacra = { email = "y.bera003.06@protonmail.com"; github = "yusdacra"; @@ -11667,6 +11910,16 @@ github = "pulsation"; githubId = 1838397; }; + princemachiavelli = { + name = "Josh Hoffer"; + email = "jhoffer@sansorgan.es"; + github = "princemachiavelli"; + githubId = 2730968; + keys = [{ + longkeyid = "ed25519/0x83124F97A318EA18"; + fingerprint = "DD54 130B ABEC B65C 1F6B 2A38 8312 4F97 A318 EA18"; + }]; + }; ydlr = { name = "ydlr"; email = "ydlr@ydlr.io"; diff --git a/third_party/nixpkgs/maintainers/scripts/haskell/mark-broken.sh b/third_party/nixpkgs/maintainers/scripts/haskell/mark-broken.sh index ddf2b1243b..58433abe66 100755 --- a/third_party/nixpkgs/maintainers/scripts/haskell/mark-broken.sh +++ b/third_party/nixpkgs/maintainers/scripts/haskell/mark-broken.sh @@ -38,7 +38,7 @@ git add $broken_config git add pkgs/development/haskell-modules/configuration-hackage2nix/transitive-broken.yaml git add pkgs/development/haskell-modules/hackage-packages.nix git commit -F - << EOF -hackage2nix: Mark failing builds broken +haskellPackages: mark builds failing on hydra as broken This commit has been generated by maintainers/scripts/haskell/mark-broken.sh EOF diff --git a/third_party/nixpkgs/maintainers/scripts/haskell/regenerate-hackage-packages.sh b/third_party/nixpkgs/maintainers/scripts/haskell/regenerate-hackage-packages.sh index 1effa5e259..285f6ed7cf 100755 --- a/third_party/nixpkgs/maintainers/scripts/haskell/regenerate-hackage-packages.sh +++ b/third_party/nixpkgs/maintainers/scripts/haskell/regenerate-hackage-packages.sh @@ -14,6 +14,8 @@ set -euo pipefail +HACKAGE2NIX="${HACKAGE2NIX:-hackage2nix}" + # To prevent hackage2nix fails because of encoding. # See: https://github.com/NixOS/nixpkgs/pull/122023 export LC_ALL=C.UTF-8 @@ -23,7 +25,7 @@ unpacked_hackage="$(nix-build -E "$extraction_derivation" --no-out-link)" config_dir=pkgs/development/haskell-modules/configuration-hackage2nix echo "Starting hackage2nix to regenerate pkgs/development/haskell-modules/hackage-packages.nix ..." -hackage2nix \ +"$HACKAGE2NIX" \ --hackage "$unpacked_hackage" \ --preferred-versions <(for n in "$unpacked_hackage"/*/preferred-versions; do cat "$n"; echo; done) \ --nixpkgs "$PWD" \ @@ -35,7 +37,7 @@ hackage2nix \ if [[ "${1:-}" == "--do-commit" ]]; then git add pkgs/development/haskell-modules/hackage-packages.nix git commit -F - << EOF -hackage-packages.nix: Regenerate based on current config +haskellPackages: regenerate package set based on current config This commit has been generated by maintainers/scripts/haskell/regenerate-hackage-packages.sh EOF diff --git a/third_party/nixpkgs/maintainers/scripts/haskell/update-stackage.sh b/third_party/nixpkgs/maintainers/scripts/haskell/update-stackage.sh index db336bf12d..ecf38dc4b9 100755 --- a/third_party/nixpkgs/maintainers/scripts/haskell/update-stackage.sh +++ b/third_party/nixpkgs/maintainers/scripts/haskell/update-stackage.sh @@ -11,15 +11,17 @@ stackage_config="pkgs/development/haskell-modules/configuration-hackage2nix/stac trap "rm ${tmpfile} ${tmpfile}.new" 0 touch "$tmpfile" "$tmpfile.new" # Creating files here so that trap creates no errors. -curl -L -s "https://stackage.org/nightly/cabal.config" >"$tmpfile" -old_version=$(grep "# Stackage Nightly" $stackage_config | sed -E 's/.*([0-9]{4}-[0-9]{2}-[0-9]{2}).*/\1/') -version=$(sed -rn "s/^--.*http:..(www.)?stackage.org.snapshot.nightly-//p" "$tmpfile") +curl -L -s "https://stackage.org/lts/cabal.config" >"$tmpfile" +old_version=$(grep "# Stackage" $stackage_config | sed -E 's/.*([0-9]{2}\.[0-9]+)/\1/') +version=$(sed -rn "s/^--.*http:..(www.)?stackage.org.snapshot.lts-//p" "$tmpfile") if [[ "$old_version" == "$version" ]]; then echo "No new stackage version" exit 0 # Nothing to do fi +echo "Updating Stackage LTS from $old_version to $version." + # Create a simple yaml version of the file. sed -r \ -e '/^--/d' \ @@ -31,7 +33,7 @@ sed -r \ < "${tmpfile}" | sort --ignore-case >"${tmpfile}.new" cat > $stackage_config << EOF -# Stackage Nightly $version +# Stackage LTS $version # This file is auto-generated by # maintainers/scripts/haskell/update-stackage.sh default-package-overrides: @@ -39,29 +41,16 @@ EOF # Drop restrictions on some tools where we always want the latest version. sed -r \ - -e '/ cabal-install /d' \ -e '/ cabal2nix /d' \ - -e '/ cabal2spec /d' \ -e '/ distribution-nixpkgs /d' \ - -e '/ git-annex /d' \ - -e '/ hindent /d' \ - -e '/ hledger/d' \ - -e '/ hlint /d' \ - -e '/ hoogle /d' \ - -e '/ hopenssl /d' \ -e '/ jailbreak-cabal /d' \ - -e '/ json-autotype/d' \ -e '/ language-nix /d' \ - -e '/ shake /d' \ - -e '/ ShellCheck /d' \ - -e '/ stack /d' \ - -e '/ weeder /d' \ < "${tmpfile}.new" >> $stackage_config if [[ "${1:-}" == "--do-commit" ]]; then git add $stackage_config git commit -F - << EOF -Stackage Nightly: $old_version -> $version +haskellPackages: stackage-lts $old_version -> $version This commit has been generated by maintainers/scripts/haskell/update-stackage.sh EOF diff --git a/third_party/nixpkgs/maintainers/team-list.nix b/third_party/nixpkgs/maintainers/team-list.nix index ab05ab7a5b..ab42a99486 100644 --- a/third_party/nixpkgs/maintainers/team-list.nix +++ b/third_party/nixpkgs/maintainers/team-list.nix @@ -136,6 +136,7 @@ with lib.maintainers; { mmilata petabyteboy ryantm + yuka ]; scope = "Maintain Jitsi."; }; @@ -155,12 +156,12 @@ with lib.maintainers; { matrix = { members = [ ma27 - pacien fadenb mguentner ekleog ralith mjlbach + dandellion ]; scope = "Maintain the ecosystem around Matrix, a decentralized messenger."; }; @@ -204,4 +205,12 @@ with lib.maintainers; { ]; scope = "Group registration for Serokell employees who collectively maintain packages."; }; + + tts = { + members = [ + hexa + mic92 + ]; + scope = "coqui-ai TTS (formerly Mozilla TTS) and leaf packages"; + }; } diff --git a/third_party/nixpkgs/nixos/doc/manual/administration/boot-problems.section.md b/third_party/nixpkgs/nixos/doc/manual/administration/boot-problems.section.md new file mode 100644 index 0000000000..eb9209602a --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/administration/boot-problems.section.md @@ -0,0 +1,35 @@ +# Boot Problems {#sec-boot-problems} + +If NixOS fails to boot, there are a number of kernel command line parameters that may help you to identify or fix the issue. You can add these parameters in the GRUB boot menu by pressing “e” to modify the selected boot entry and editing the line starting with `linux`. The following are some useful kernel command line parameters that are recognised by the NixOS boot scripts or by systemd: + +`boot.shell_on_fail` + +: Allows the user to start a root shell if something goes wrong in stage 1 of the boot process (the initial ramdisk). This is disabled by default because there is no authentication for the root shell. + +`boot.debug1` + +: Start an interactive shell in stage 1 before anything useful has been done. That is, no modules have been loaded and no file systems have been mounted, except for `/proc` and `/sys`. + +`boot.debug1devices` + +: Like `boot.debug1`, but runs stage1 until kernel modules are loaded and device nodes are created. This may help with e.g. making the keyboard work. + +`boot.debug1mounts` + +: Like `boot.debug1` or `boot.debug1devices`, but runs stage1 until all filesystems that are mounted during initrd are mounted (see [neededForBoot](#opt-fileSystems._name_.neededForBoot)). As a motivating example, this could be useful if you've forgotten to set [neededForBoot](options.html#opt-fileSystems._name_.neededForBoot) on a file system. + +`boot.trace` + +: Print every shell command executed by the stage 1 and 2 boot scripts. + +`single` + +: Boot into rescue mode (a.k.a. single user mode). This will cause systemd to start nothing but the unit `rescue.target`, which runs `sulogin` to prompt for the root password and start a root login shell. Exiting the shell causes the system to continue with the normal boot process. + +`systemd.log_level=debug` `systemd.log_target=console` + +: Make systemd very verbose and send log messages to the console instead of the journal. For more parameters recognised by systemd, see systemd(1). + +Notice that for `boot.shell_on_fail`, `boot.debug1`, `boot.debug1devices`, and `boot.debug1mounts`, if you did **not** select "start the new shell as pid 1", and you `exit` from the new shell, boot will proceed normally from the point where it failed, as if you'd chosen "ignore the error and continue". + +If no login prompts or X11 login screens appear (e.g. due to hanging dependencies), you can press Alt+ArrowUp. If you’re lucky, this will start rescue mode (described above). (Also note that since most units have a 90-second timeout before systemd gives up on them, the `agetty` login prompts should appear eventually unless something is very wrong.) diff --git a/third_party/nixpkgs/nixos/doc/manual/administration/boot-problems.xml b/third_party/nixpkgs/nixos/doc/manual/administration/boot-problems.xml deleted file mode 100644 index e0f6628401..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/administration/boot-problems.xml +++ /dev/null @@ -1,126 +0,0 @@ -
- Boot Problems - - - If NixOS fails to boot, there are a number of kernel command line parameters - that may help you to identify or fix the issue. You can add these parameters - in the GRUB boot menu by pressing “e” to modify the selected boot entry - and editing the line starting with linux. The following - are some useful kernel command line parameters that are recognised by the - NixOS boot scripts or by systemd: - - - - boot.shell_on_fail - - - - Allows the user to start a root shell if something goes wrong in stage 1 - of the boot process (the initial ramdisk). This is disabled by default - because there is no authentication for the root shell. - - - - - - boot.debug1 - - - - Start an interactive shell in stage 1 before anything useful has been - done. That is, no modules have been loaded and no file systems have been - mounted, except for /proc and - /sys. - - - - - - boot.debug1devices - - - - Like boot.debug1, but runs stage1 until kernel modules are loaded and device nodes are created. - This may help with e.g. making the keyboard work. - - - - - - boot.debug1mounts - - - - Like boot.debug1 or - boot.debug1devices, but runs stage1 until all - filesystems that are mounted during initrd are mounted (see - - ). As a motivating example, this could be useful if you've forgotten to set - - on a file system. - - - - - - boot.trace - - - - Print every shell command executed by the stage 1 and 2 boot scripts. - - - - - - single - - - - Boot into rescue mode (a.k.a. single user mode). This will cause systemd - to start nothing but the unit rescue.target, which - runs sulogin to prompt for the root password and start - a root login shell. Exiting the shell causes the system to continue with - the normal boot process. - - - - - - systemd.log_level=debug systemd.log_target=console - - - - Make systemd very verbose and send log messages to the console instead of - the journal. - - - - - For more parameters recognised by systemd, see - systemd - 1. - - - - Notice that for boot.shell_on_fail, - boot.debug1, boot.debug1devices, and - boot.debug1mounts, if you did not - select "start the new shell as pid 1", and you exit from - the new shell, boot will proceed normally from the point where it failed, as - if you'd chosen "ignore the error and continue". - - - - If no login prompts or X11 login screens appear (e.g. due to hanging - dependencies), you can press Alt+ArrowUp. If you’re lucky, this will start - rescue mode (described above). (Also note that since most units have a - 90-second timeout before systemd gives up on them, the - agetty login prompts should appear eventually unless - something is very wrong.) - -
diff --git a/third_party/nixpkgs/nixos/doc/manual/administration/troubleshooting.xml b/third_party/nixpkgs/nixos/doc/manual/administration/troubleshooting.xml index 6496e7bde3..b055acadac 100644 --- a/third_party/nixpkgs/nixos/doc/manual/administration/troubleshooting.xml +++ b/third_party/nixpkgs/nixos/doc/manual/administration/troubleshooting.xml @@ -8,7 +8,7 @@ This chapter describes solutions to common problems you might encounter when you manage your NixOS system. - + diff --git a/third_party/nixpkgs/nixos/doc/manual/configuration/abstractions.section.md b/third_party/nixpkgs/nixos/doc/manual/configuration/abstractions.section.md new file mode 100644 index 0000000000..bf26e4c51e --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/configuration/abstractions.section.md @@ -0,0 +1,80 @@ +# Abstractions {#sec-module-abstractions} + +If you find yourself repeating yourself over and over, it’s time to abstract. Take, for instance, this Apache HTTP Server configuration: + +```nix +{ + services.httpd.virtualHosts = + { "blog.example.org" = { + documentRoot = "/webroot/blog.example.org"; + adminAddr = "alice@example.org"; + forceSSL = true; + enableACME = true; + enablePHP = true; + }; + "wiki.example.org" = { + documentRoot = "/webroot/wiki.example.org"; + adminAddr = "alice@example.org"; + forceSSL = true; + enableACME = true; + enablePHP = true; + }; + }; +} +``` + +It defines two virtual hosts with nearly identical configuration; the only difference is the document root directories. To prevent this duplication, we can use a `let`: +```nix +let + commonConfig = + { adminAddr = "alice@example.org"; + forceSSL = true; + enableACME = true; + }; +in +{ + services.httpd.virtualHosts = + { "blog.example.org" = (commonConfig // { documentRoot = "/webroot/blog.example.org"; }); + "wiki.example.org" = (commonConfig // { documentRoot = "/webroot/wiki.example.com"; }); + }; +} +``` + +The `let commonConfig = ...` defines a variable named `commonConfig`. The `//` operator merges two attribute sets, so the configuration of the second virtual host is the set `commonConfig` extended with the document root option. + +You can write a `let` wherever an expression is allowed. Thus, you also could have written: + +```nix +{ + services.httpd.virtualHosts = + let commonConfig = ...; in + { "blog.example.org" = (commonConfig // { ... }) + "wiki.example.org" = (commonConfig // { ... }) + }; +} +``` + +but not `{ let commonConfig = ...; in ...; }` since attributes (as opposed to attribute values) are not expressions. + +**Functions** provide another method of abstraction. For instance, suppose that we want to generate lots of different virtual hosts, all with identical configuration except for the document root. This can be done as follows: + +```nix +{ + services.httpd.virtualHosts = + let + makeVirtualHost = webroot: + { documentRoot = webroot; + adminAddr = "alice@example.org"; + forceSSL = true; + enableACME = true; + }; + in + { "example.org" = (makeVirtualHost "/webroot/example.org"); + "example.com" = (makeVirtualHost "/webroot/example.com"); + "example.gov" = (makeVirtualHost "/webroot/example.gov"); + "example.nl" = (makeVirtualHost "/webroot/example.nl"); + }; +} +``` + +Here, `makeVirtualHost` is a function that takes a single argument `webroot` and returns the configuration for a virtual host. That function is then called for several names to produce the list of virtual host configurations. diff --git a/third_party/nixpkgs/nixos/doc/manual/configuration/abstractions.xml b/third_party/nixpkgs/nixos/doc/manual/configuration/abstractions.xml deleted file mode 100644 index df9ff2615e..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/configuration/abstractions.xml +++ /dev/null @@ -1,101 +0,0 @@ -
- Abstractions - - - If you find yourself repeating yourself over and over, it’s time to - abstract. Take, for instance, this Apache HTTP Server configuration: - -{ - = - { "blog.example.org" = { - documentRoot = "/webroot/blog.example.org"; - adminAddr = "alice@example.org"; - forceSSL = true; - enableACME = true; - enablePHP = true; - }; - "wiki.example.org" = { - documentRoot = "/webroot/wiki.example.org"; - adminAddr = "alice@example.org"; - forceSSL = true; - enableACME = true; - enablePHP = true; - }; - }; -} - - It defines two virtual hosts with nearly identical configuration; the only - difference is the document root directories. To prevent this - duplication, we can use a let: - -let - commonConfig = - { adminAddr = "alice@example.org"; - forceSSL = true; - enableACME = true; - }; -in -{ - = - { "blog.example.org" = (commonConfig // { documentRoot = "/webroot/blog.example.org"; }); - "wiki.example.org" = (commonConfig // { documentRoot = "/webroot/wiki.example.com"; }); - }; -} - - The let commonConfig = ... - defines a variable named commonConfig. The - // operator merges two attribute sets, so the - configuration of the second virtual host is the set - commonConfig extended with the document root option. - - - - You can write a let wherever an expression is allowed. - Thus, you also could have written: - -{ - = - let commonConfig = ...; in - { "blog.example.org" = (commonConfig // { ... }) - "wiki.example.org" = (commonConfig // { ... }) - }; -} - - but not { let commonConfig = ...; in - ...; } since attributes (as opposed to - attribute values) are not expressions. - - - - Functions provide another method of abstraction. For - instance, suppose that we want to generate lots of different virtual hosts, - all with identical configuration except for the document root. This can be done - as follows: - -{ - = - let - makeVirtualHost = webroot: - { documentRoot = webroot; - adminAddr = "alice@example.org"; - forceSSL = true; - enableACME = true; - }; - in - { "example.org" = (makeVirtualHost "/webroot/example.org"); - "example.com" = (makeVirtualHost "/webroot/example.com"); - "example.gov" = (makeVirtualHost "/webroot/example.gov"); - "example.nl" = (makeVirtualHost "/webroot/example.nl"); - }; -} - - Here, makeVirtualHost is a function that takes a single - argument webroot and returns the configuration for a virtual - host. That function is then called for several names to produce the list of - virtual host configurations. - -
diff --git a/third_party/nixpkgs/nixos/doc/manual/configuration/config-syntax.xml b/third_party/nixpkgs/nixos/doc/manual/configuration/config-syntax.xml index 5526dea247..a374c6a870 100644 --- a/third_party/nixpkgs/nixos/doc/manual/configuration/config-syntax.xml +++ b/third_party/nixpkgs/nixos/doc/manual/configuration/config-syntax.xml @@ -19,7 +19,7 @@ xlink:href="https://nixos.org/nix/manual/#chap-writing-nix-expressions">Nix constructs useful in NixOS configuration files. - + diff --git a/third_party/nixpkgs/nixos/doc/manual/configuration/file-systems.xml b/third_party/nixpkgs/nixos/doc/manual/configuration/file-systems.xml index 9747433375..42c59844ff 100644 --- a/third_party/nixpkgs/nixos/doc/manual/configuration/file-systems.xml +++ b/third_party/nixpkgs/nixos/doc/manual/configuration/file-systems.xml @@ -54,4 +54,5 @@ + diff --git a/third_party/nixpkgs/nixos/doc/manual/configuration/gpu-accel.xml b/third_party/nixpkgs/nixos/doc/manual/configuration/gpu-accel.xml index 3695a5ff44..9aa9be86a0 100644 --- a/third_party/nixpkgs/nixos/doc/manual/configuration/gpu-accel.xml +++ b/third_party/nixpkgs/nixos/doc/manual/configuration/gpu-accel.xml @@ -178,9 +178,9 @@ GPU1: Core Next (GCN) GPUs are supported through either radv, which is part of mesa, or the amdvlk package. Adding the amdvlk package to - makes both drivers - available for applications and lets them choose. A specific driver can - be forced as follows: + makes amdvlk the + default driver and hides radv and lavapipe from the device list. A + specific driver can be forced as follows: = [ pkgs.amdvlk @@ -191,10 +191,9 @@ GPU1: pkgs.driversi686Linux.amdvlk ]; - # For amdvlk - .VK_ICD_FILENAMES = - "/run/opengl-driver/share/vulkan/icd.d/amd_icd64.json"; - # For radv + # Force radv + .AMD_VULKAN_ICD = "RADV"; + # Or .VK_ICD_FILENAMES = "/run/opengl-driver/share/vulkan/icd.d/radeon_icd.x86_64.json"; diff --git a/third_party/nixpkgs/nixos/doc/manual/configuration/sshfs-file-systems.section.md b/third_party/nixpkgs/nixos/doc/manual/configuration/sshfs-file-systems.section.md new file mode 100644 index 0000000000..4625fce03d --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/configuration/sshfs-file-systems.section.md @@ -0,0 +1,104 @@ +# SSHFS File Systems {#sec-sshfs-file-systems} + +[SSHFS][sshfs] is a [FUSE][fuse] filesystem that allows easy access to directories on a remote machine using the SSH File Transfer Protocol (SFTP). +It means that if you have SSH access to a machine, no additional setup is needed to mount a directory. + +[sshfs]: https://github.com/libfuse/sshfs +[fuse]: https://en.wikipedia.org/wiki/Filesystem_in_Userspace + +## Interactive mounting {#sec-sshfs-interactive} + +In NixOS, SSHFS is packaged as sshfs. +Once installed, mounting a directory interactively is simple as running: +```ShellSession +$ sshfs my-user@example.com:/my-dir /mnt/my-dir +``` +Like any other FUSE file system, the directory is unmounted using: +```ShellSession +$ fusermount -u /mnt/my-dir +``` + +## Non-interactive mounting {#sec-sshfs-non-interactive} + +Mounting non-interactively requires some precautions because `sshfs` will run at boot and under a different user (root). +For obvious reason, you can't input a password, so public key authentication using an unencrypted key is needed. +To create a new key without a passphrase you can do: +```ShellSession +$ ssh-keygen -t ed25519 -P '' -f example-key +Generating public/private ed25519 key pair. +Your identification has been saved in test-key +Your public key has been saved in test-key.pub +The key fingerprint is: +SHA256:yjxl3UbTn31fLWeyLYTAKYJPRmzknjQZoyG8gSNEoIE my-user@workstation +``` +To keep the key safe, change the ownership to `root:root` and make sure the permissions are `600`: +OpenSSH normally refuses to use the key if it's not well-protected. + +The file system can be configured in NixOS via the usual [fileSystems](options.html#opt-fileSystems) option. +Here's a typical setup: +```nix +{ + system.fsPackages = [ pkgs.sshfs ]; + + fileSystems."/mnt/my-dir" = { + device = "my-user@example.com:/my-dir/"; + fsType = "sshfs"; + options = + [ # Filesystem options + "allow_other" # for non-root access + "_netdev" # this is a network fs + "x-systemd.automount" # mount on demand + + # SSH options + "reconnect" # handle connection drops + "ServerAliveInterval=15" # keep connections alive + "IdentityFile=/var/secrets/example-key" + ]; + }; +} +``` +More options from `ssh_config(5)` can be given as well, for example you can change the default SSH port or specify a jump proxy: +```nix +{ + options = + [ "ProxyJump=bastion@example.com" + "Port=22" + ]; +} +``` +It's also possible to change the `ssh` command used by SSHFS to connect to the server. +For example: +```nix +{ + options = + [ (builtins.replaceStrings [" "] ["\\040"] + "ssh_command=${pkgs.openssh}/bin/ssh -v -L 8080:localhost:80") + ]; + +} +``` + +::: {.note} +The escaping of spaces is needed because every option is written to the `/etc/fstab` file, which is a space-separated table. +::: + +### Troubleshooting {#sec-sshfs-troubleshooting} + +If you're having a hard time figuring out why mounting is failing, you can add the option `"debug"`. +This enables a verbose log in SSHFS that you can access via: +```ShellSession +$ journalctl -u $(systemd-escape -p /mnt/my-dir/).mount +Jun 22 11:41:18 workstation mount[87790]: SSHFS version 3.7.1 +Jun 22 11:41:18 workstation mount[87793]: executing <-x> <-a> <-oClearAllForwardings=yes> <-oServerAliveInterval=15> <-oIdentityFile=/var/secrets/wrong-key> <-2> <-s> +Jun 22 11:41:19 workstation mount[87793]: my-user@example.com: Permission denied (publickey). +Jun 22 11:41:19 workstation mount[87790]: read: Connection reset by peer +Jun 22 11:41:19 workstation systemd[1]: mnt-my\x2ddir.mount: Mount process exited, code=exited, status=1/FAILURE +Jun 22 11:41:19 workstation systemd[1]: mnt-my\x2ddir.mount: Failed with result 'exit-code'. +Jun 22 11:41:19 workstation systemd[1]: Failed to mount /mnt/my-dir. +Jun 22 11:41:19 workstation systemd[1]: mnt-my\x2ddir.mount: Consumed 54ms CPU time, received 2.3K IP traffic, sent 2.7K IP traffic. +``` + +::: {.note} +If the mount point contains special characters it needs to be escaped using `systemd-escape`. +This is due to the way systemd converts paths into unit names. +::: diff --git a/third_party/nixpkgs/nixos/doc/manual/configuration/wayland.xml b/third_party/nixpkgs/nixos/doc/manual/configuration/wayland.xml index 231c219cf0..2aefda3e22 100644 --- a/third_party/nixpkgs/nixos/doc/manual/configuration/wayland.xml +++ b/third_party/nixpkgs/nixos/doc/manual/configuration/wayland.xml @@ -20,4 +20,14 @@ essential utilities. Now you can start sway from the TTY console. + + + If you are using a wlroots-based compositor, like sway, and want to be able to + share your screen, you might want to activate this option: + + = true; + + and configure Pipewire using + and related options. + diff --git a/third_party/nixpkgs/nixos/doc/manual/configuration/x-windows.xml b/third_party/nixpkgs/nixos/doc/manual/configuration/x-windows.xml index e721938970..f9121508d7 100644 --- a/third_party/nixpkgs/nixos/doc/manual/configuration/x-windows.xml +++ b/third_party/nixpkgs/nixos/doc/manual/configuration/x-windows.xml @@ -191,9 +191,12 @@ GTK themes can be installed either to user profile or system-wide (via environment.systemPackages). To make Qt 5 applications - look similar to GTK2 ones, you can install qt5.qtbase.gtk - package into your system environment. It should work for all Qt 5 library - versions. + look similar to GTK ones, you can use the following configuration: + + = true; + = "gtk2"; + = "gtk2"; + @@ -238,11 +241,11 @@ xkb_symbols "us-greek" description = "US layout with alt-gr greek"; languages = [ "eng" ]; symbolsFile = /yourpath/symbols/us-greek; -} +}; - The name should match the one given to the + The name (after extraLayouts.) should match the one given to the xkb_symbols block. diff --git a/third_party/nixpkgs/nixos/doc/manual/development/assertions.section.md b/third_party/nixpkgs/nixos/doc/manual/development/assertions.section.md new file mode 100644 index 0000000000..cc6d81e569 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/development/assertions.section.md @@ -0,0 +1,40 @@ +# Warnings and Assertions {#sec-assertions} + +When configuration problems are detectable in a module, it is a good idea to write an assertion or warning. Doing so provides clear feedback to the user and prevents errors after the build. + +Although Nix has the `abort` and `builtins.trace` [functions](https://nixos.org/nix/manual/#ssec-builtins) to perform such tasks, they are not ideally suited for NixOS modules. Instead of these functions, you can declare your warnings and assertions using the NixOS module system. + +## Warnings {#sec-assertions-warnings} + +This is an example of using `warnings`. + +```nix +{ config, lib, ... }: +{ + config = lib.mkIf config.services.foo.enable { + warnings = + if config.services.foo.bar + then [ ''You have enabled the bar feature of the foo service. + This is known to cause some specific problems in certain situations. + '' ] + else []; + } +} +``` + +## Assertions {#sec-assertions-assetions} + +This example, extracted from the [`syslogd` module](https://github.com/NixOS/nixpkgs/blob/release-17.09/nixos/modules/services/logging/syslogd.nix) shows how to use `assertions`. Since there can only be one active syslog daemon at a time, an assertion is useful to prevent such a broken system from being built. + +```nix +{ config, lib, ... }: +{ + config = lib.mkIf config.services.syslogd.enable { + assertions = + [ { assertion = !config.services.rsyslogd.enable; + message = "rsyslogd conflicts with syslogd"; + } + ]; + } +} +``` diff --git a/third_party/nixpkgs/nixos/doc/manual/development/assertions.xml b/third_party/nixpkgs/nixos/doc/manual/development/assertions.xml deleted file mode 100644 index 32f90cf2e7..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/development/assertions.xml +++ /dev/null @@ -1,74 +0,0 @@ -
- Warnings and Assertions - - - When configuration problems are detectable in a module, it is a good idea to - write an assertion or warning. Doing so provides clear feedback to the user - and prevents errors after the build. - - - - Although Nix has the abort and - builtins.trace - functions - to perform such tasks, they are not ideally suited for NixOS modules. Instead - of these functions, you can declare your warnings and assertions using the - NixOS module system. - - -
- Warnings - - - This is an example of using warnings. - - - - - -
- -
- Assertions - - - This example, extracted from the - - syslogd module shows how to use - assertions. Since there can only be one active syslog - daemon at a time, an assertion is useful to prevent such a broken system - from being built. - - - - - -
-
diff --git a/third_party/nixpkgs/nixos/doc/manual/development/writing-modules.xml b/third_party/nixpkgs/nixos/doc/manual/development/writing-modules.xml index fad4637f51..04497db77b 100644 --- a/third_party/nixpkgs/nixos/doc/manual/development/writing-modules.xml +++ b/third_party/nixpkgs/nixos/doc/manual/development/writing-modules.xml @@ -182,7 +182,7 @@ in { - + diff --git a/third_party/nixpkgs/nixos/doc/manual/development/writing-nixos-tests.xml b/third_party/nixpkgs/nixos/doc/manual/development/writing-nixos-tests.xml index 32321deedd..e372c66410 100644 --- a/third_party/nixpkgs/nixos/doc/manual/development/writing-nixos-tests.xml +++ b/third_party/nixpkgs/nixos/doc/manual/development/writing-nixos-tests.xml @@ -274,8 +274,29 @@ start_all() - Execute a shell command, raising an exception if the exit status is not - zero, otherwise returning the standard output. + Execute a shell command, raising an exception if the exit status + is not zero, otherwise returning the standard output. Commands + are run with set -euo pipefail set: + + + + If several commands are separated by ; + and one fails, the command as a whole will fail. + + + + + For pipelines, the last non-zero exit status will be + returned (if there is one, zero will be returned + otherwise). + + + + + Dereferencing unset variables fail the command. + + + diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/administration/boot-problems.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/administration/boot-problems.section.xml new file mode 100644 index 0000000000..b484d07581 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/administration/boot-problems.section.xml @@ -0,0 +1,127 @@ +
+ Boot Problems + + If NixOS fails to boot, there are a number of kernel command line + parameters that may help you to identify or fix the issue. You can + add these parameters in the GRUB boot menu by pressing “e” to modify + the selected boot entry and editing the line starting with + linux. The following are some useful kernel + command line parameters that are recognised by the NixOS boot + scripts or by systemd: + + + + + boot.shell_on_fail + + + + Allows the user to start a root shell if something goes wrong + in stage 1 of the boot process (the initial ramdisk). This is + disabled by default because there is no authentication for the + root shell. + + + + + + boot.debug1 + + + + Start an interactive shell in stage 1 before anything useful + has been done. That is, no modules have been loaded and no + file systems have been mounted, except for + /proc and /sys. + + + + + + boot.debug1devices + + + + Like boot.debug1, but runs stage1 until + kernel modules are loaded and device nodes are created. This + may help with e.g. making the keyboard work. + + + + + + boot.debug1mounts + + + + Like boot.debug1 or + boot.debug1devices, but runs stage1 until + all filesystems that are mounted during initrd are mounted + (see + neededForBoot). + As a motivating example, this could be useful if you’ve + forgotten to set + neededForBoot + on a file system. + + + + + + boot.trace + + + + Print every shell command executed by the stage 1 and 2 boot + scripts. + + + + + + single + + + + Boot into rescue mode (a.k.a. single user mode). This will + cause systemd to start nothing but the unit + rescue.target, which runs + sulogin to prompt for the root password and + start a root login shell. Exiting the shell causes the system + to continue with the normal boot process. + + + + + + systemd.log_level=debug + systemd.log_target=console + + + + Make systemd very verbose and send log messages to the console + instead of the journal. For more parameters recognised by + systemd, see systemd(1). + + + + + + Notice that for boot.shell_on_fail, + boot.debug1, + boot.debug1devices, and + boot.debug1mounts, if you did + not select start the new + shell as pid 1, and you exit from the new + shell, boot will proceed normally from the point where it failed, as + if you’d chosen ignore the error and continue. + + + If no login prompts or X11 login screens appear (e.g. due to hanging + dependencies), you can press Alt+ArrowUp. If you’re lucky, this will + start rescue mode (described above). (Also note that since most + units have a 90-second timeout before systemd gives up on them, the + agetty login prompts should appear eventually + unless something is very wrong.) + +
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/configuration/abstractions.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/configuration/abstractions.section.xml new file mode 100644 index 0000000000..c71e23e34a --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/configuration/abstractions.section.xml @@ -0,0 +1,101 @@ +
+ Abstractions + + If you find yourself repeating yourself over and over, it’s time to + abstract. Take, for instance, this Apache HTTP Server configuration: + + +{ + services.httpd.virtualHosts = + { "blog.example.org" = { + documentRoot = "/webroot/blog.example.org"; + adminAddr = "alice@example.org"; + forceSSL = true; + enableACME = true; + enablePHP = true; + }; + "wiki.example.org" = { + documentRoot = "/webroot/wiki.example.org"; + adminAddr = "alice@example.org"; + forceSSL = true; + enableACME = true; + enablePHP = true; + }; + }; +} + + + It defines two virtual hosts with nearly identical configuration; + the only difference is the document root directories. To prevent + this duplication, we can use a let: + + +let + commonConfig = + { adminAddr = "alice@example.org"; + forceSSL = true; + enableACME = true; + }; +in +{ + services.httpd.virtualHosts = + { "blog.example.org" = (commonConfig // { documentRoot = "/webroot/blog.example.org"; }); + "wiki.example.org" = (commonConfig // { documentRoot = "/webroot/wiki.example.com"; }); + }; +} + + + The let commonConfig = ... defines a variable + named commonConfig. The // + operator merges two attribute sets, so the configuration of the + second virtual host is the set commonConfig + extended with the document root option. + + + You can write a let wherever an expression is + allowed. Thus, you also could have written: + + +{ + services.httpd.virtualHosts = + let commonConfig = ...; in + { "blog.example.org" = (commonConfig // { ... }) + "wiki.example.org" = (commonConfig // { ... }) + }; +} + + + but not { let commonConfig = ...; in ...; } since + attributes (as opposed to attribute values) are not expressions. + + + Functions provide another method + of abstraction. For instance, suppose that we want to generate lots + of different virtual hosts, all with identical configuration except + for the document root. This can be done as follows: + + +{ + services.httpd.virtualHosts = + let + makeVirtualHost = webroot: + { documentRoot = webroot; + adminAddr = "alice@example.org"; + forceSSL = true; + enableACME = true; + }; + in + { "example.org" = (makeVirtualHost "/webroot/example.org"); + "example.com" = (makeVirtualHost "/webroot/example.com"); + "example.gov" = (makeVirtualHost "/webroot/example.gov"); + "example.nl" = (makeVirtualHost "/webroot/example.nl"); + }; +} + + + Here, makeVirtualHost is a function that takes a + single argument webroot and returns the + configuration for a virtual host. That function is then called for + several names to produce the list of virtual host configurations. + +
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/configuration/sshfs-file-systems.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/configuration/sshfs-file-systems.section.xml new file mode 100644 index 0000000000..6b317aa63e --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/configuration/sshfs-file-systems.section.xml @@ -0,0 +1,139 @@ +
+ SSHFS File Systems + + SSHFS is + a + FUSE + filesystem that allows easy access to directories on a remote + machine using the SSH File Transfer Protocol (SFTP). It means that + if you have SSH access to a machine, no additional setup is needed + to mount a directory. + +
+ Interactive mounting + + In NixOS, SSHFS is packaged as sshfs. Once + installed, mounting a directory interactively is simple as + running: + + +$ sshfs my-user@example.com:/my-dir /mnt/my-dir + + + Like any other FUSE file system, the directory is unmounted using: + + +$ fusermount -u /mnt/my-dir + +
+
+ Non-interactive mounting + + Mounting non-interactively requires some precautions because + sshfs will run at boot and under a different + user (root). For obvious reason, you can’t input a password, so + public key authentication using an unencrypted key is needed. To + create a new key without a passphrase you can do: + + +$ ssh-keygen -t ed25519 -P '' -f example-key +Generating public/private ed25519 key pair. +Your identification has been saved in test-key +Your public key has been saved in test-key.pub +The key fingerprint is: +SHA256:yjxl3UbTn31fLWeyLYTAKYJPRmzknjQZoyG8gSNEoIE my-user@workstation + + + To keep the key safe, change the ownership to + root:root and make sure the permissions are + 600: OpenSSH normally refuses to use the key if + it’s not well-protected. + + + The file system can be configured in NixOS via the usual + fileSystems + option. Here’s a typical setup: + + +{ + system.fsPackages = [ pkgs.sshfs ]; + + fileSystems."/mnt/my-dir" = { + device = "my-user@example.com:/my-dir/"; + fsType = "sshfs"; + options = + [ # Filesystem options + "allow_other" # for non-root access + "_netdev" # this is a network fs + "x-systemd.automount" # mount on demand + + # SSH options + "reconnect" # handle connection drops + "ServerAliveInterval=15" # keep connections alive + "IdentityFile=/var/secrets/example-key" + ]; + }; +} + + + More options from ssh_config(5) can be given as + well, for example you can change the default SSH port or specify a + jump proxy: + + +{ + options = + [ "ProxyJump=bastion@example.com" + "Port=22" + ]; +} + + + It’s also possible to change the ssh command + used by SSHFS to connect to the server. For example: + + +{ + options = + [ (builtins.replaceStrings [" "] ["\\040"] + "ssh_command=${pkgs.openssh}/bin/ssh -v -L 8080:localhost:80") + ]; + +} + + + + The escaping of spaces is needed because every option is written + to the /etc/fstab file, which is a + space-separated table. + + +
+ Troubleshooting + + If you’re having a hard time figuring out why mounting is + failing, you can add the option + "debug". This enables a verbose log + in SSHFS that you can access via: + + +$ journalctl -u $(systemd-escape -p /mnt/my-dir/).mount +Jun 22 11:41:18 workstation mount[87790]: SSHFS version 3.7.1 +Jun 22 11:41:18 workstation mount[87793]: executing <ssh> <-x> <-a> <-oClearAllForwardings=yes> <-oServerAliveInterval=15> <-oIdentityFile=/var/secrets/wrong-key> <-2> <my-user@example.com> <-s> <sftp> +Jun 22 11:41:19 workstation mount[87793]: my-user@example.com: Permission denied (publickey). +Jun 22 11:41:19 workstation mount[87790]: read: Connection reset by peer +Jun 22 11:41:19 workstation systemd[1]: mnt-my\x2ddir.mount: Mount process exited, code=exited, status=1/FAILURE +Jun 22 11:41:19 workstation systemd[1]: mnt-my\x2ddir.mount: Failed with result 'exit-code'. +Jun 22 11:41:19 workstation systemd[1]: Failed to mount /mnt/my-dir. +Jun 22 11:41:19 workstation systemd[1]: mnt-my\x2ddir.mount: Consumed 54ms CPU time, received 2.3K IP traffic, sent 2.7K IP traffic. + + + + If the mount point contains special characters it needs to be + escaped using systemd-escape. This is due + to the way systemd converts paths into unit names. + + +
+
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/development/assertions.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/development/assertions.section.xml new file mode 100644 index 0000000000..0844d484d6 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/development/assertions.section.xml @@ -0,0 +1,58 @@ +
+ Warnings and Assertions + + When configuration problems are detectable in a module, it is a good + idea to write an assertion or warning. Doing so provides clear + feedback to the user and prevents errors after the build. + + + Although Nix has the abort and + builtins.trace + functions + to perform such tasks, they are not ideally suited for NixOS + modules. Instead of these functions, you can declare your warnings + and assertions using the NixOS module system. + +
+ Warnings + + This is an example of using warnings. + + +{ config, lib, ... }: +{ + config = lib.mkIf config.services.foo.enable { + warnings = + if config.services.foo.bar + then [ ''You have enabled the bar feature of the foo service. + This is known to cause some specific problems in certain situations. + '' ] + else []; + } +} + +
+
+ Assertions + + This example, extracted from the + syslogd + module shows how to use assertions. + Since there can only be one active syslog daemon at a time, an + assertion is useful to prevent such a broken system from being + built. + + +{ config, lib, ... }: +{ + config = lib.mkIf config.services.syslogd.enable { + assertions = + [ { assertion = !config.services.rsyslogd.enable; + message = "rsyslogd conflicts with syslogd"; + } + ]; + } +} + +
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1310.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1310.section.xml new file mode 100644 index 0000000000..b4f3657b4b --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1310.section.xml @@ -0,0 +1,6 @@ +
+ Release 13.10 (<quote>Aardvark</quote>, 2013/10/31) + + This is the first stable release branch of NixOS. + +
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1404.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1404.section.xml new file mode 100644 index 0000000000..8771623b46 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1404.section.xml @@ -0,0 +1,189 @@ +
+ Release 14.04 (<quote>Baboon</quote>, 2014/04/30) + + This is the second stable release branch of NixOS. In addition to + numerous new and upgraded packages and modules, this release has the + following highlights: + + + + + Installation on UEFI systems is now supported. See + for details. + + + + + Systemd has been updated to version 212, which has + numerous + improvements. NixOS now automatically starts systemd user + instances when you log in. You can define global user units + through the systemd.unit.* options. + + + + + NixOS is now based on Glibc 2.19 and GCC 4.8. + + + + + The default Linux kernel has been updated to 3.12. + + + + + KDE has been updated to 4.12. + + + + + GNOME 3.10 experimental support has been added. + + + + + Nix has been updated to 1.7 + (details). + + + + + NixOS now supports fully declarative management of users and + groups. If you set users.mutableUsers to + false, then the contents of + /etc/passwd and /etc/group + will be + congruent + to your NixOS configuration. For instance, if you remove a user + from users.extraUsers and run + nixos-rebuild, the user account will cease to + exist. Also, imperative commands for managing users and groups, + such as useradd, are no longer available. If + users.mutableUsers is true + (the default), then behaviour is unchanged from NixOS 13.10. + + + + + NixOS now has basic container support, meaning you can easily + run a NixOS instance as a container in a NixOS host system. + These containers are suitable for testing and experimentation + but not production use, since they’re not fully isolated from + the host. See for details. + + + + + Systemd units provided by packages can now be overridden from + the NixOS configuration. For instance, if a package + foo provides systemd units, you can say: + + +{ + systemd.packages = [ pkgs.foo ]; +} + + + to enable those units. You can then set or override unit options + in the usual way, e.g. + + +{ + systemd.services.foo.wantedBy = [ "multi-user.target" ]; + systemd.services.foo.serviceConfig.MemoryLimit = "512M"; +} + + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + Nixpkgs no longer exposes unfree packages by default. If your + NixOS configuration requires unfree packages from Nixpkgs, you + need to enable support for them explicitly by setting: + + +{ + nixpkgs.config.allowUnfree = true; +} + + + Otherwise, you get an error message such as: + + + error: package ‘nvidia-x11-331.49-3.12.17’ in ‘…/nvidia-x11/default.nix:56’ + has an unfree license, refusing to evaluate + + + + + The Adobe Flash player is no longer enabled by default in the + Firefox and Chromium wrappers. To enable it, you must set: + + +{ + nixpkgs.config.allowUnfree = true; + nixpkgs.config.firefox.enableAdobeFlash = true; # for Firefox + nixpkgs.config.chromium.enableAdobeFlash = true; # for Chromium +} + + + + + The firewall is now enabled by default. If you don’t want this, + you need to disable it explicitly: + + +{ + networking.firewall.enable = false; +} + + + + + The option boot.loader.grub.memtest86 has + been renamed to + boot.loader.grub.memtest86.enable. + + + + + The mysql55 service has been merged into the + mysql service, which no longer sets a default + for the option services.mysql.package. + + + + + Package variants are now differentiated by suffixing the name, + rather than the version. For instance, + sqlite-3.8.4.3-interactive is now called + sqlite-interactive-3.8.4.3. This ensures that + nix-env -i sqlite is unambiguous, and that + nix-env -u won’t upgrade + sqlite to + sqlite-interactive or vice versa. Notably, + this change affects the Firefox wrapper (which provides + plugins), as it is now called + firefox-wrapper. So when using + nix-env, you should do + nix-env -e firefox; nix-env -i firefox-wrapper + if you want to keep using the wrapper. This change does not + affect declarative package management, since attribute names + like pkgs.firefoxWrapper were already + unambiguous. + + + + + The symlink /etc/ca-bundle.crt is gone. + Programs should instead use the environment variable + OPENSSL_X509_CERT_FILE (which points to + /etc/ssl/certs/ca-bundle.crt). + + + +
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1412.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1412.section.xml new file mode 100644 index 0000000000..3b6af73359 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1412.section.xml @@ -0,0 +1,466 @@ +
+ Release 14.12 (<quote>Caterpillar</quote>, 2014/12/30) + + In addition to numerous new and upgraded packages, this release has + the following highlights: + + + + + Systemd has been updated to version 217, which has numerous + improvements. + + + + + Nix + has been updated to 1.8. + + + + + NixOS is now based on Glibc 2.20. + + + + + KDE has been updated to 4.14. + + + + + The default Linux kernel has been updated to 3.14. + + + + + If users.mutableUsers is enabled (the + default), changes made to the declaration of a user or group + will be correctly realised when running + nixos-rebuild. For instance, removing a user + specification from configuration.nix will + cause the actual user account to be deleted. If + users.mutableUsers is disabled, it is no + longer necessary to specify UIDs or GIDs; if omitted, they are + allocated dynamically. + + + + + Following new services were added since the last release: + + + + + atftpd + + + + + bosun + + + + + bspwm + + + + + chronos + + + + + collectd + + + + + consul + + + + + cpuminer-cryptonight + + + + + crashplan + + + + + dnscrypt-proxy + + + + + docker-registry + + + + + docker + + + + + etcd + + + + + fail2ban + + + + + fcgiwrap + + + + + fleet + + + + + fluxbox + + + + + gdm + + + + + geoclue2 + + + + + gitlab + + + + + gitolite + + + + + gnome3.gnome-documents + + + + + gnome3.gnome-online-miners + + + + + gnome3.gvfs + + + + + gnome3.seahorse + + + + + hbase + + + + + i2pd + + + + + influxdb + + + + + kubernetes + + + + + liquidsoap + + + + + lxc + + + + + mailpile + + + + + mesos + + + + + mlmmj + + + + + monetdb + + + + + mopidy + + + + + neo4j + + + + + nsd + + + + + openntpd + + + + + opentsdb + + + + + openvswitch + + + + + parallels-guest + + + + + peerflix + + + + + phd + + + + + polipo + + + + + prosody + + + + + radicale + + + + + redmine + + + + + riemann + + + + + scollector + + + + + seeks + + + + + siproxd + + + + + strongswan + + + + + tcsd + + + + + teamspeak3 + + + + + thermald + + + + + torque/mrom + + + + + torque/server + + + + + uhub + + + + + unifi + + + + + znc + + + + + zookeeper + + + + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + The default version of Apache httpd is now 2.4. If you use the + extraConfig option to pass literal Apache + configuration text, you may need to update it — see + Apache’s + documentation for details. If you wish to continue to use + httpd 2.2, add the following line to your NixOS configuration: + + +{ + services.httpd.package = pkgs.apacheHttpd_2_2; +} + + + + + PHP 5.3 has been removed because it is no longer supported by + the PHP project. A + migration + guide is available. + + + + + The host side of a container virtual Ethernet pair is now called + ve-container-name rather than + c-container-name. + + + + + GNOME 3.10 support has been dropped. The default GNOME version + is now 3.12. + + + + + VirtualBox has been upgraded to 4.3.20 release. Users may be + required to run rm -rf /tmp/.vbox*. The line + imports = [ <nixpkgs/nixos/modules/programs/virtualbox.nix> ] + is no longer necessary, use + services.virtualboxHost.enable = true + instead. + + + Also, hardening mode is now enabled by default, which means that + unless you want to use USB support, you no longer need to be a + member of the vboxusers group. + + + + + Chromium has been updated to 39.0.2171.65. + enablePepperPDF is now enabled by default. + chromium*Wrapper packages no longer exist, + because upstream removed NSAPI support. + chromium-stable has been renamed to + chromium. + + + + + Python packaging documentation is now part of nixpkgs manual. To + override the python packages available to a custom python you + now use pkgs.pythonFull.buildEnv.override + instead of pkgs.pythonFull.override. + + + + + boot.resumeDevice = "8:6" is no + longer supported. Most users will want to leave it undefined, + which takes the swap partitions automatically. There is an + evaluation assertion to ensure that the string starts with a + slash. + + + + + The system-wide default timezone for NixOS installations changed + from CET to UTC. To choose + a different timezone for your system, configure + time.timeZone in + configuration.nix. A fairly complete list of + possible values for that setting is available at + https://en.wikipedia.org/wiki/List_of_tz_database_time_zones. + + + + + GNU screen has been updated to 4.2.1, which breaks the ability + to connect to sessions created by older versions of screen. + + + + + The Intel GPU driver was updated to the 3.x prerelease version + (used by most distributions) and supports DRI3 now. + + + +
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1509.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1509.section.xml new file mode 100644 index 0000000000..68d2ab389e --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1509.section.xml @@ -0,0 +1,776 @@ +
+ Release 15.09 (<quote>Dingo</quote>, 2015/09/30) + + In addition to numerous new and upgraded packages, this release has + the following highlights: + + + + + The Haskell + packages infrastructure has been re-designed from the ground up + ("Haskell NG"). NixOS now distributes the latest + version of every single package registered on + Hackage -- + well in excess of 8,000 Haskell packages. Detailed instructions + on how to use that infrastructure can be found in the + User's + Guide to the Haskell Infrastructure. Users migrating from + an earlier release may find helpful information below, in the + list of backwards-incompatible changes. Furthermore, we + distribute 51(!) additional Haskell package sets that provide + every single LTS + Haskell release since version 0.0 as well as the most + recent Stackage + Nightly snapshot. The announcement + "Full + Stackage Support in Nixpkgs" gives additional + details. + + + + + Nix has been updated to version 1.10, which among other + improvements enables cryptographic signatures on binary caches + for improved security. + + + + + You can now keep your NixOS system up to date automatically by + setting + + + + +{ + system.autoUpgrade.enable = true; +} + + + This will cause the system to periodically check for updates in your + current channel and run nixos-rebuild. + + + + + This release is based on Glibc 2.21, GCC 4.9 and Linux 3.18. + + + + + GNOME has been upgraded to 3.16. + + + + + Xfce has been upgraded to 4.12. + + + + + KDE 5 has been upgraded to KDE Frameworks 5.10, Plasma 5.3.2 and + Applications 15.04.3. KDE 4 has been updated to kdelibs-4.14.10. + + + + + E19 has been upgraded to 0.16.8.15. + + + + + The following new services were added since the last release: + + + + + services/mail/exim.nix + + + + + services/misc/apache-kafka.nix + + + + + services/misc/canto-daemon.nix + + + + + services/misc/confd.nix + + + + + services/misc/devmon.nix + + + + + services/misc/gitit.nix + + + + + services/misc/ihaskell.nix + + + + + services/misc/mbpfan.nix + + + + + services/misc/mediatomb.nix + + + + + services/misc/mwlib.nix + + + + + services/misc/parsoid.nix + + + + + services/misc/plex.nix + + + + + services/misc/ripple-rest.nix + + + + + services/misc/ripple-data-api.nix + + + + + services/misc/subsonic.nix + + + + + services/misc/sundtek.nix + + + + + services/monitoring/cadvisor.nix + + + + + services/monitoring/das_watchdog.nix + + + + + services/monitoring/grafana.nix + + + + + services/monitoring/riemann-tools.nix + + + + + services/monitoring/teamviewer.nix + + + + + services/network-filesystems/u9fs.nix + + + + + services/networking/aiccu.nix + + + + + services/networking/asterisk.nix + + + + + services/networking/bird.nix + + + + + services/networking/charybdis.nix + + + + + services/networking/docker-registry-server.nix + + + + + services/networking/fan.nix + + + + + services/networking/firefox/sync-server.nix + + + + + services/networking/gateone.nix + + + + + services/networking/heyefi.nix + + + + + services/networking/i2p.nix + + + + + services/networking/lambdabot.nix + + + + + services/networking/mstpd.nix + + + + + services/networking/nix-serve.nix + + + + + services/networking/nylon.nix + + + + + services/networking/racoon.nix + + + + + services/networking/skydns.nix + + + + + services/networking/shout.nix + + + + + services/networking/softether.nix + + + + + services/networking/sslh.nix + + + + + services/networking/tinc.nix + + + + + services/networking/tlsdated.nix + + + + + services/networking/tox-bootstrapd.nix + + + + + services/networking/tvheadend.nix + + + + + services/networking/zerotierone.nix + + + + + services/scheduling/marathon.nix + + + + + services/security/fprintd.nix + + + + + services/security/hologram.nix + + + + + services/security/munge.nix + + + + + services/system/cloud-init.nix + + + + + services/web-servers/shellinabox.nix + + + + + services/web-servers/uwsgi.nix + + + + + services/x11/unclutter.nix + + + + + services/x11/display-managers/sddm.nix + + + + + system/boot/coredump.nix + + + + + system/boot/loader/loader.nix + + + + + system/boot/loader/generic-extlinux-compatible + + + + + system/boot/networkd.nix + + + + + system/boot/resolved.nix + + + + + system/boot/timesyncd.nix + + + + + tasks/filesystems/exfat.nix + + + + + tasks/filesystems/ntfs.nix + + + + + tasks/filesystems/vboxsf.nix + + + + + virtualisation/virtualbox-host.nix + + + + + virtualisation/vmware-guest.nix + + + + + virtualisation/xen-dom0.nix + + + + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + sshd no longer supports DSA and ECDSA host + keys by default. If you have existing systems with such host + keys and want to continue to use them, please set + + + + +{ + system.stateVersion = "14.12"; +} + + + The new option system.stateVersion ensures that + certain configuration changes that could break existing systems + (such as the sshd host key setting) will maintain + compatibility with the specified NixOS release. NixOps sets the + state version of existing deployments automatically. + + + + + cron is no longer enabled by default, unless + you have a non-empty + services.cron.systemCronJobs. To force + cron to be enabled, set + services.cron.enable = true. + + + + + Nix now requires binary caches to be cryptographically signed. + If you have unsigned binary caches that you want to continue to + use, you should set + nix.requireSignedBinaryCaches = false. + + + + + Steam now doesn't need root rights to work. Instead of using + *-steam-chrootenv, you should now just run + steam. steamChrootEnv + package was renamed to steam, and old + steam package -- to + steamOriginal. + + + + + CMPlayer has been renamed to bomi upstream. Package + cmplayer was accordingly renamed to + bomi + + + + + Atom Shell has been renamed to Electron upstream. Package + atom-shell was accordingly renamed to + electron + + + + + Elm is not released on Hackage anymore. You should now use + elmPackages.elm which contains the latest Elm + platform. + + + + + The CUPS printing service has been updated to version + 2.0.2. Furthermore its systemd service has + been renamed to cups.service. + + + Local printers are no longer shared or advertised by default. + This behavior can be changed by enabling + services.printing.defaultShared or + services.printing.browsing respectively. + + + + + The VirtualBox host and guest options have been named more + consistently. They can now found in + virtualisation.virtualbox.host.* instead of + services.virtualboxHost.* and + virtualisation.virtualbox.guest.* instead of + services.virtualboxGuest.*. + + + Also, there now is support for the vboxsf + file system using the fileSystems + configuration attribute. An example of how this can be used in a + configuration: + + + + +{ + fileSystems."/shiny" = { + device = "myshinysharedfolder"; + fsType = "vboxsf"; + }; +} + + + + + "nix-env -qa" no longer discovers + Haskell packages by name. The only packages visible in the + global scope are ghc, + cabal-install, and stack, + but all other packages are hidden. The reason for this + inconvenience is the sheer size of the Haskell package set. + Name-based lookups are expensive, and most + nix-env -qa operations would become much + slower if we'd add the entire Hackage database into the top + level attribute set. Instead, the list of Haskell packages can + be displayed by running: + + + + +nix-env -f "<nixpkgs>" -qaP -A haskellPackages + + + Executable programs written in Haskell can be installed with: + + +nix-env -f "<nixpkgs>" -iA haskellPackages.pandoc + + + Installing Haskell libraries this way, however, + is no longer supported. See the next item for more details. + + + + + Previous versions of NixOS came with a feature called + ghc-wrapper, a small script that allowed GHC + to transparently pick up on libraries installed in the user's + profile. This feature has been deprecated; + ghc-wrapper was removed from the + distribution. The proper way to register Haskell libraries with + the compiler now is the + haskellPackages.ghcWithPackages function. The + User's + Guide to the Haskell Infrastructure provides more + information about this subject. + + + + + All Haskell builds that have been generated with version 1.x of + the cabal2nix utility are now invalid and + need to be re-generated with a current version of + cabal2nix to function. The most recent + version of this tool can be installed by running + nix-env -i cabal2nix. + + + + + The haskellPackages set in Nixpkgs used to + have a function attribute called extension + that users could override in their + ~/.nixpkgs/config.nix files to configure + additional attributes, etc. That function still exists, but it's + now called overrides. + + + + + The OpenBLAS library has been updated to version + 0.2.14. Support for the + x86_64-darwin platform was added. Dynamic + architecture detection was enabled; OpenBLAS now selects + microarchitecture-optimized routines at runtime, so optimal + performance is achieved without the need to rebuild OpenBLAS + locally. OpenBLAS has replaced ATLAS in most packages which use + an optimized BLAS or LAPACK implementation. + + + + + The phpfpm is now using the default PHP + version (pkgs.php) instead of PHP 5.4 + (pkgs.php54). + + + + + The locate service no longer indexes the Nix + store by default, preventing packages with potentially numerous + versions from cluttering the output. Indexing the store can be + activated by setting + services.locate.includeStore = true. + + + + + The Nix expression search path (NIX_PATH) no + longer contains /etc/nixos/nixpkgs by + default. You can override NIX_PATH by setting + nix.nixPath. + + + + + Python 2.6 has been marked as broken (as it no longer receives + security updates from upstream). + + + + + Any use of module arguments such as pkgs to + access library functions, or to define + imports attributes will now lead to an + infinite loop at the time of the evaluation. + + + In case of an infinite loop, use the + --show-trace command line argument and read + the line just above the error message. + + +$ nixos-rebuild build --show-trace +… +while evaluating the module argument `pkgs' in "/etc/nixos/my-module.nix": +infinite recursion encountered + + + Any use of pkgs.lib, should be replaced by + lib, after adding it as argument of the + module. The following module + + +{ config, pkgs, ... }: + +with pkgs.lib; + +{ + options = { + foo = mkOption { … }; + }; + config = mkIf config.foo { … }; +} + + + should be modified to look like: + + +{ config, pkgs, lib, ... }: + +with lib; + +{ + options = { + foo = mkOption { option declaration }; + }; + config = mkIf config.foo { option definition }; +} + + + When pkgs is used to download other projects + to import their modules, and only in such cases, it should be + replaced by (import <nixpkgs> {}). The + following module + + +{ config, pkgs, ... }: + +let + myProject = pkgs.fetchurl { + src = url; + sha256 = hash; + }; +in + +{ + imports = [ "${myProject}/module.nix" ]; +} + + + should be modified to look like: + + +{ config, pkgs, ... }: + +let + myProject = (import <nixpkgs> {}).fetchurl { + src = url; + sha256 = hash; + }; +in + +{ + imports = [ "${myProject}/module.nix" ]; +} + + + + + Other notable improvements: + + + + + The nixos and nixpkgs channels were unified, so one + can use + nix-env -iA nixos.bash instead of + nix-env -iA nixos.pkgs.bash. See + the + commit for details. + + + + + Users running an SSH server who worry about the quality of their + /etc/ssh/moduli file with respect to the + vulnerabilities + discovered in the Diffie-Hellman key exchange can now + replace OpenSSH's default version with one they generated + themselves using the new + services.openssh.moduliFile option. + + + + + A newly packaged TeX Live 2015 is provided in + pkgs.texlive, split into 6500 nix packages. + For basic user documentation see + the + source. Beware of + an + issue when installing a too large package set. The plan + is to deprecate and maybe delete the original TeX packages until + the next release. + + + + + buildEnv.env on all Python interpreters is + now available for nix-shell interoperability. + + + +
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1603.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1603.section.xml new file mode 100644 index 0000000000..172b800b59 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1603.section.xml @@ -0,0 +1,695 @@ +
+ Release 16.03 (<quote>Emu</quote>, 2016/03/31) + + In addition to numerous new and upgraded packages, this release has + the following highlights: + + + + + Systemd 229, bringing + numerous + improvements over 217. + + + + + Linux 4.4 (was 3.18). + + + + + GCC 5.3 (was 4.9). Note that GCC 5 + changes + the C++ ABI in an incompatible way; this may cause + problems if you try to link objects compiled with different + versions of GCC. + + + + + Glibc 2.23 (was 2.21). + + + + + Binutils 2.26 (was 2.23.1). See #909 + + + + + Improved support for ensuring + bitwise + reproducible builds. For example, + stdenv now sets the environment variable + SOURCE_DATE_EPOCH to a deterministic value, + and Nix has + gained + an option to repeat a build a number of times to test + determinism. An ongoing project, the goal of exact + reproducibility is to allow binaries to be verified + independently (e.g., a user might only trust binaries that + appear in three independent binary caches). + + + + + Perl 5.22. + + + + + The following new services were added since the last release: + + + + + services/monitoring/longview.nix + + + + + hardware/video/webcam/facetimehd.nix + + + + + i18n/input-method/default.nix + + + + + i18n/input-method/fcitx.nix + + + + + i18n/input-method/ibus.nix + + + + + i18n/input-method/nabi.nix + + + + + i18n/input-method/uim.nix + + + + + programs/fish.nix + + + + + security/acme.nix + + + + + security/audit.nix + + + + + security/oath.nix + + + + + services/hardware/irqbalance.nix + + + + + services/mail/dspam.nix + + + + + services/mail/opendkim.nix + + + + + services/mail/postsrsd.nix + + + + + services/mail/rspamd.nix + + + + + services/mail/rmilter.nix + + + + + services/misc/autofs.nix + + + + + services/misc/bepasty.nix + + + + + services/misc/calibre-server.nix + + + + + services/misc/cfdyndns.nix + + + + + services/misc/gammu-smsd.nix + + + + + services/misc/mathics.nix + + + + + services/misc/matrix-synapse.nix + + + + + services/misc/octoprint.nix + + + + + services/monitoring/hdaps.nix + + + + + services/monitoring/heapster.nix + + + + + services/monitoring/longview.nix + + + + + services/network-filesystems/netatalk.nix + + + + + services/network-filesystems/xtreemfs.nix + + + + + services/networking/autossh.nix + + + + + services/networking/dnschain.nix + + + + + services/networking/gale.nix + + + + + services/networking/miniupnpd.nix + + + + + services/networking/namecoind.nix + + + + + services/networking/ostinato.nix + + + + + services/networking/pdnsd.nix + + + + + services/networking/shairport-sync.nix + + + + + services/networking/supplicant.nix + + + + + services/search/kibana.nix + + + + + services/security/haka.nix + + + + + services/security/physlock.nix + + + + + services/web-apps/pump.io.nix + + + + + services/x11/hardware/libinput.nix + + + + + services/x11/window-managers/windowlab.nix + + + + + system/boot/initrd-network.nix + + + + + system/boot/initrd-ssh.nix + + + + + system/boot/loader/loader.nix + + + + + system/boot/networkd.nix + + + + + system/boot/resolved.nix + + + + + virtualisation/lxd.nix + + + + + virtualisation/rkt.nix + + + + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + We no longer produce graphical ISO images and VirtualBox images + for i686-linux. A minimal ISO image is still + provided. + + + + + Firefox and similar browsers are now wrapped by + default. The package and attribute names are plain + firefox or midori, etc. + Backward-compatibility attributes were set up, but note that + nix-env -u will not + update your current firefox-with-plugins; you + have to uninstall it and install firefox + instead. + + + + + wmiiSnap has been replaced with + wmii_hg, but + services.xserver.windowManager.wmii.enable + has been updated respectively so this only affects you if you + have explicitly installed wmiiSnap. + + + + + jobs NixOS option has been removed. It served + as compatibility layer between Upstart jobs and SystemD + services. All services have been rewritten to use + systemd.services + + + + + wmiimenu is removed, as it has been removed + by the developers upstream. Use wimenu from + the wmii-hg package. + + + + + Gitit is no longer automatically added to the module list in + NixOS and as such there will not be any manual entries for it. + You will need to add an import statement to your NixOS + configuration in order to use it, e.g. + + +{ + imports = [ <nixpkgs/nixos/modules/services/misc/gitit.nix> ]; +} + + + will include the Gitit service configuration options. + + + + + nginx does not accept flags for enabling and + disabling modules anymore. Instead it accepts + modules argument, which is a list of modules + to be built in. All modules now reside in + nginxModules set. Example configuration: + + +nginx.override { + modules = [ nginxModules.rtmp nginxModules.dav nginxModules.moreheaders ]; +} + + + + + s3sync is removed, as it hasn't been + developed by upstream for 4 years and only runs with ruby 1.8. + For an actively-developer alternative look at + tarsnap and others. + + + + + ruby_1_8 has been removed as it's not + supported from upstream anymore and probably contains security + issues. + + + + + tidy-html5 package is removed. Upstream only + provided (lib)tidy5 during development, and + now they went back to (lib)tidy to work as a + drop-in replacement of the original package that has been + unmaintained for years. You can (still) use the + html-tidy package, which got updated to a + stable release from this new upstream. + + + + + extraDeviceOptions argument is removed from + bumblebee package. Instead there are now two + separate arguments: extraNvidiaDeviceOptions + and extraNouveauDeviceOptions for setting + extra X11 options for nvidia and nouveau drivers, respectively. + + + + + The Ctrl+Alt+Backspace key combination no + longer kills the X server by default. There's a new option + services.xserver.enableCtrlAltBackspace + allowing to enable the combination again. + + + + + emacsPackagesNg now contains all packages + from the ELPA, MELPA, and MELPA Stable repositories. + + + + + Data directory for Postfix MTA server is moved from + /var/postfix to + /var/lib/postfix. Old configurations are + migrated automatically. service.postfix + module has also received many improvements, such as correct + directories' access rights, new aliasFiles + and mapFiles options and more. + + + + + Filesystem options should now be configured as a list of + strings, not a comma-separated string. The old style will + continue to work, but print a warning, until the 16.09 release. + An example of the new style: + + +{ + fileSystems."/example" = { + device = "/dev/sdc"; + fsType = "btrfs"; + options = [ "noatime" "compress=lzo" "space_cache" "autodefrag" ]; + }; +} + + + + + CUPS, installed by services.printing module, + now has its data directory in /var/lib/cups. + Old configurations from /etc/cups are moved + there automatically, but there might be problems. Also + configuration options + services.printing.cupsdConf and + services.printing.cupsdFilesConf were removed + because they had been allowing one to override configuration + variables required for CUPS to work at all on NixOS. For most + use cases, services.printing.extraConf and + new option services.printing.extraFilesConf + should be enough; if you encounter a situation when they are + not, please file a bug. + + + There are also Gutenprint improvements; in particular, a new + option services.printing.gutenprint is added + to enable automatic updating of Gutenprint PPMs; it's greatly + recommended to enable it instead of adding + gutenprint to the drivers + list. + + + + + services.xserver.vaapiDrivers has been + removed. Use + hardware.opengl.extraPackages{,32} instead. + You can also specify VDPAU drivers there. + + + + + programs.ibus moved to + i18n.inputMethod.ibus. The option + programs.ibus.plugins changed to + i18n.inputMethod.ibus.engines and the option + to enable ibus changed from + programs.ibus.enable to + i18n.inputMethod.enabled. + i18n.inputMethod.enabled should be set to the + used input method name, "ibus" for + ibus. An example of the new style: + + +{ + i18n.inputMethod.enabled = "ibus"; + i18n.inputMethod.ibus.engines = with pkgs.ibus-engines; [ anthy mozc ]; +} + + + That is equivalent to the old version: + + +{ + programs.ibus.enable = true; + programs.ibus.plugins = with pkgs; [ ibus-anthy mozc ]; +} + + + + + services.udev.extraRules option now writes + rules to 99-local.rules instead of + 10-local.rules. This makes all the user rules + apply after others, so their results wouldn't be overriden by + anything else. + + + + + Large parts of the services.gitlab module has + been been rewritten. There are new configuration options + available. The stateDir option was renamned + to statePath and the + satellitesDir option was removed. Please + review the currently available options. + + + + + The option + services.nsd.zones.<name>.data no + longer interpret the dollar sign ($) as a shell variable, as + such it should not be escaped anymore. Thus the following zone + data: + + +$ORIGIN example.com. +$TTL 1800 +@ IN SOA ns1.vpn.nbp.name. admin.example.com. ( + + + Should modified to look like the actual file expected by nsd: + + +$ORIGIN example.com. +$TTL 1800 +@ IN SOA ns1.vpn.nbp.name. admin.example.com. ( + + + + + service.syncthing.dataDir options now has to + point to exact folder where syncthing is writing to. Example + configuration should look something like: + + +{ + services.syncthing = { + enable = true; + dataDir = "/home/somebody/.syncthing"; + user = "somebody"; + }; +} + + + + + networking.firewall.allowPing is now enabled + by default. Users are encouraged to configure an appropriate + rate limit for their machines using the Kernel interface at + /proc/sys/net/ipv4/icmp_ratelimit and + /proc/sys/net/ipv6/icmp/ratelimit or using + the firewall itself, i.e. by setting the NixOS option + networking.firewall.pingLimit. + + + + + Systems with some broadcom cards used to result into a generated + config that is no longer accepted. If you get errors like + + +error: path ‘/nix/store/*-broadcom-sta-*’ does not exist and cannot be created + + + you should either re-run + nixos-generate-config or manually replace + "${config.boot.kernelPackages.broadcom_sta}" + by config.boot.kernelPackages.broadcom_sta in + your /etc/nixos/hardware-configuration.nix. + More discussion is on + + the github issue. + + + + + The services.xserver.startGnuPGAgent option + has been removed. GnuPG 2.1.x changed the way the gpg-agent + works, and that new approach no longer requires (or even + supports) the "start everything as a child of the + agent" scheme we've implemented in NixOS for older + versions. To configure the gpg-agent for your X session, add the + following code to ~/.bashrc or some file + that’s sourced when your shell is started: + + +GPG_TTY=$(tty) +export GPG_TTY + + + If you want to use gpg-agent for SSH, too, add the following to + your session initialization (e.g. + displayManager.sessionCommands) + + + gpg-connect-agent /bye + unset SSH_AGENT_PID + export SSH_AUTH_SOCK="''${HOME}/.gnupg/S.gpg-agent.ssh" + + + and make sure that + + + enable-ssh-support + + + is included in your ~/.gnupg/gpg-agent.conf. + You will need to use ssh-add to re-add your + ssh keys. If gpg’s automatic transformation of the private keys + to the new format fails, you will need to re-import your private + keyring as well: + + + gpg --import ~/.gnupg/secring.gpg + + + The gpg-agent(1) man page has more details + about this subject, i.e. in the "EXAMPLES" section. + + + + + Other notable improvements: + + + + + ejabberd module is brought back and now works + on NixOS. + + + + + Input method support was improved. New NixOS modules (fcitx, + nabi and uim), fcitx engines (chewing, hangul, m17n, mozc and + table-other) and ibus engines (hangul and m17n) have been added. + + + +
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1609.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1609.section.xml new file mode 100644 index 0000000000..0fba40a0e7 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1609.section.xml @@ -0,0 +1,273 @@ +
+ Release 16.09 (<quote>Flounder</quote>, 2016/09/30) + + In addition to numerous new and upgraded packages, this release has + the following highlights: + + + + + Many NixOS configurations and Nix packages now use significantly + less disk space, thanks to the + extensive + work on closure size reduction. For example, the closure + size of a minimal NixOS container went down from ~424 MiB in + 16.03 to ~212 MiB in 16.09, while the closure size of Firefox + went from ~651 MiB to ~259 MiB. + + + + + To improve security, packages are now + built + using various hardening features. See the Nixpkgs manual + for more information. + + + + + Support for PXE netboot. See + for documentation. + + + + + X.org server 1.18. If you use the ati_unfree + driver, 1.17 is still used due to an ABI incompatibility. + + + + + This release is based on Glibc 2.24, GCC 5.4.0 and systemd 231. + The default Linux kernel remains 4.4. + + + + + The following new services were added since the last release: + + + + + (this will get automatically generated at release time) + + + + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + A large number of packages have been converted to use the + multiple outputs feature of Nix to greatly reduce the amount of + required disk space, as mentioned above. This may require + changes to any custom packages to make them build again; see the + relevant chapter in the Nixpkgs manual for more information. + (Additional caveat to packagers: some packaging conventions + related to multiple-output packages + were + changed late (August 2016) in the release cycle and + differ from the initial introduction of multiple outputs.) + + + + + Previous versions of Nixpkgs had support for all versions of the + LTS Haskell package set. That support has been dropped. The + previously provided haskell.packages.lts-x_y + package sets still exist in name to aviod breaking user code, + but these package sets don't actually contain the versions + mandated by the corresponding LTS release. Instead, our package + set it loosely based on the latest available LTS release, i.e. + LTS 7.x at the time of this writing. New releases of NixOS and + Nixpkgs will drop those old names entirely. + The + motivation for this change has been discussed at length + on the nix-dev mailing list and in + Github + issue #14897. Development strategies for Haskell hackers + who want to rely on Nix and NixOS have been described in + another + nix-dev article. + + + + + Shell aliases for systemd sub-commands + were + dropped: start, + stop, restart, + status. + + + + + Redis now binds to 127.0.0.1 only instead of listening to all + network interfaces. This is the default behavior of Redis 3.2 + + + + + /var/empty is now immutable. Activation + script runs chattr +i to forbid any + modifications inside the folder. See + + the pull request for what bugs this caused. + + + + + Gitlab's maintainance script gitlab-runner + was removed and split up into the more clearer + gitlab-run and gitlab-rake + scripts, because gitlab-runner is a component + of Gitlab CI. + + + + + services.xserver.libinput.accelProfile + default changed from flat to + adaptive, as per + + official documentation. + + + + + fonts.fontconfig.ultimate.rendering was + removed because our presets were obsolete for some time. New + presets are hardcoded into FreeType; you can select a preset via + fonts.fontconfig.ultimate.preset. You can + customize those presets via ordinary environment variables, + using environment.variables. + + + + + The audit service is no longer enabled by + default. Use security.audit.enable = true to + explicitly enable it. + + + + + pkgs.linuxPackages.virtualbox now contains + only the kernel modules instead of the VirtualBox user space + binaries. If you want to reference the user space binaries, you + have to use the new pkgs.virtualbox instead. + + + + + goPackages was replaced with separated Go + applications in appropriate nixpkgs + categories. Each Go package uses its own dependency set. There's + also a new go2nix tool introduced to generate + a Go package definition from its Go source automatically. + + + + + services.mongodb.extraConfig configuration + format was changed to YAML. + + + + + PHP has been upgraded to 7.0 + + + + + Other notable improvements: + + + + + Revamped grsecurity/PaX support. There is now only a single + general-purpose distribution kernel and the configuration + interface has been streamlined. Desktop users should be able to + simply set + + +{ + security.grsecurity.enable = true; +} + + + to get a reasonably secure system without having to sacrifice + too much functionality. + + + + + Special filesystems, like /proc, + /run and others, now have the same mount + options as recommended by systemd and are unified across + different places in NixOS. Mount options are updated during + nixos-rebuild switch if possible. One benefit + from this is improved security — most such filesystems are now + mounted with noexec, nodev + and/or nosuid options. + + + + + The reverse path filter was interfering with DHCPv4 server + operation in the past. An exception for DHCPv4 and a new option + to log packets that were dropped due to the reverse path filter + was added + (networking.firewall.logReversePathDrops) for + easier debugging. + + + + + Containers configuration within + containers.<name>.config is + now + properly typed and checked. In particular, partial + configurations are merged correctly. + + + + + The directory container setuid wrapper programs, + /var/setuid-wrappers, + is + now updated atomically to prevent failures if the switch to a + new configuration is interrupted. + + + + + services.xserver.startGnuPGAgent has been + removed due to GnuPG 2.1.x bump. See + + how to achieve similar behavior. You might need to + pkill gpg-agent after the upgrade to prevent + a stale agent being in the way. + + + + + + Declarative users could share the uid due to the bug in the + script handling conflict resolution. + + + + + Gummi boot has been replaced using systemd-boot. + + + + + Hydra package and NixOS module were added for convenience. + + + +
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1703.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1703.section.xml new file mode 100644 index 0000000000..1119ec53df --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1703.section.xml @@ -0,0 +1,818 @@ +
+ Release 17.03 (<quote>Gorilla</quote>, 2017/03/31) +
+ Highlights + + In addition to numerous new and upgraded packages, this release + has the following highlights: + + + + + Nixpkgs is now extensible through overlays. See the + Nixpkgs + manual for more information. + + + + + This release is based on Glibc 2.25, GCC 5.4.0 and systemd + 232. The default Linux kernel is 4.9 and Nix is at 1.11.8. + + + + + The default desktop environment now is KDE's Plasma 5. KDE 4 + has been removed + + + + + The setuid wrapper functionality now supports setting + capabilities. + + + + + X.org server uses branch 1.19. Due to ABI incompatibilities, + ati_unfree keeps forcing 1.17 and + amdgpu-pro starts forcing 1.18. + + + + + Cross compilation has been rewritten. See the nixpkgs manual + for details. The most obvious breaking change is that in + derivations there is no .nativeDrv nor + .crossDrv are now cross by default, not + native. + + + + + The overridePackages function has been + rewritten to be replaced by + + overlays + + + + + Packages in nixpkgs can be marked as insecure through listed + vulnerabilities. See the + Nixpkgs + manual for more information. + + + + + PHP now defaults to PHP 7.1 + + + +
+
+ New Services + + The following new services were added since the last release: + + + + + hardware/ckb.nix + + + + + hardware/mcelog.nix + + + + + hardware/usb-wwan.nix + + + + + hardware/video/capture/mwprocapture.nix + + + + + programs/adb.nix + + + + + programs/chromium.nix + + + + + programs/gphoto2.nix + + + + + programs/java.nix + + + + + programs/mtr.nix + + + + + programs/oblogout.nix + + + + + programs/vim.nix + + + + + programs/wireshark.nix + + + + + security/dhparams.nix + + + + + services/audio/ympd.nix + + + + + services/computing/boinc/client.nix + + + + + services/continuous-integration/buildbot/master.nix + + + + + services/continuous-integration/buildbot/worker.nix + + + + + services/continuous-integration/gitlab-runner.nix + + + + + services/databases/riak-cs.nix + + + + + services/databases/stanchion.nix + + + + + services/desktops/gnome3/gnome-terminal-server.nix + + + + + services/editors/infinoted.nix + + + + + services/hardware/illum.nix + + + + + services/hardware/trezord.nix + + + + + services/logging/journalbeat.nix + + + + + services/mail/offlineimap.nix + + + + + services/mail/postgrey.nix + + + + + services/misc/couchpotato.nix + + + + + services/misc/docker-registry.nix + + + + + services/misc/errbot.nix + + + + + services/misc/geoip-updater.nix + + + + + services/misc/gogs.nix + + + + + services/misc/leaps.nix + + + + + services/misc/nix-optimise.nix + + + + + services/misc/ssm-agent.nix + + + + + services/misc/sssd.nix + + + + + services/monitoring/arbtt.nix + + + + + services/monitoring/netdata.nix + + + + + services/monitoring/prometheus/default.nix + + + + + services/monitoring/prometheus/alertmanager.nix + + + + + services/monitoring/prometheus/blackbox-exporter.nix + + + + + services/monitoring/prometheus/json-exporter.nix + + + + + services/monitoring/prometheus/nginx-exporter.nix + + + + + services/monitoring/prometheus/node-exporter.nix + + + + + services/monitoring/prometheus/snmp-exporter.nix + + + + + services/monitoring/prometheus/unifi-exporter.nix + + + + + services/monitoring/prometheus/varnish-exporter.nix + + + + + services/monitoring/sysstat.nix + + + + + services/monitoring/telegraf.nix + + + + + services/monitoring/vnstat.nix + + + + + services/network-filesystems/cachefilesd.nix + + + + + services/network-filesystems/glusterfs.nix + + + + + services/network-filesystems/ipfs.nix + + + + + services/networking/dante.nix + + + + + services/networking/dnscrypt-wrapper.nix + + + + + services/networking/fakeroute.nix + + + + + services/networking/flannel.nix + + + + + services/networking/htpdate.nix + + + + + services/networking/miredo.nix + + + + + services/networking/nftables.nix + + + + + services/networking/powerdns.nix + + + + + services/networking/pdns-recursor.nix + + + + + services/networking/quagga.nix + + + + + services/networking/redsocks.nix + + + + + services/networking/wireguard.nix + + + + + services/system/cgmanager.nix + + + + + services/torrent/opentracker.nix + + + + + services/web-apps/atlassian/confluence.nix + + + + + services/web-apps/atlassian/crowd.nix + + + + + services/web-apps/atlassian/jira.nix + + + + + services/web-apps/frab.nix + + + + + services/web-apps/nixbot.nix + + + + + services/web-apps/selfoss.nix + + + + + services/web-apps/quassel-webserver.nix + + + + + services/x11/unclutter-xfixes.nix + + + + + services/x11/urxvtd.nix + + + + + system/boot/systemd-nspawn.nix + + + + + virtualisation/ecs-agent.nix + + + + + virtualisation/lxcfs.nix + + + + + virtualisation/openstack/keystone.nix + + + + + virtualisation/openstack/glance.nix + + + +
+
+ Backward Incompatibilities + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + Derivations have no .nativeDrv nor + .crossDrv and are now cross by default, not + native. + + + + + stdenv.overrides is now expected to take + self and super + arguments. See lib.trivial.extends for what + those parameters represent. + + + + + ansible now defaults to ansible version 2 + as version 1 has been removed due to a serious + + vulnerability unpatched by upstream. + + + + + gnome alias has been removed along with + gtk, gtkmm and several + others. Now you need to use versioned attributes, like + gnome3. + + + + + The attribute name of the Radicale daemon has been changed + from pythonPackages.radicale to + radicale. + + + + + The stripHash bash function in + stdenv changed according to its + documentation; it now outputs the stripped name to + stdout instead of putting it in the + variable strippedName. + + + + + PHP now scans for extra configuration .ini files in /etc/php.d + instead of /etc. This prevents accidentally loading non-PHP + .ini files that may be in /etc. + + + + + Two lone top-level dict dbs moved into + dictdDBs. This affects: + dictdWordnet which is now at + dictdDBs.wordnet and + dictdWiktionary which is now at + dictdDBs.wiktionary + + + + + Parsoid service now uses YAML configuration format. + service.parsoid.interwikis is now called + service.parsoid.wikis and is a list of + either API URLs or attribute sets as specified in parsoid's + documentation. + + + + + Ntpd was replaced by + systemd-timesyncd as the default service to + synchronize system time with a remote NTP server. The old + behavior can be restored by setting + services.ntp.enable to + true. Upstream time servers for all NTP + implementations are now configured using + networking.timeServers. + + + + + service.nylon is now declared using named + instances. As an example: + + +{ + services.nylon = { + enable = true; + acceptInterface = "br0"; + bindInterface = "tun1"; + port = 5912; + }; +} + + + should be replaced with: + + +{ + services.nylon.myvpn = { + enable = true; + acceptInterface = "br0"; + bindInterface = "tun1"; + port = 5912; + }; +} + + + this enables you to declare a SOCKS proxy for each uplink. + + + + + overridePackages function no longer exists. + It is replaced by + + overlays. For example, the following code: + + +let + pkgs = import <nixpkgs> {}; +in + pkgs.overridePackages (self: super: ...) + + + should be replaced by: + + +let + pkgs = import <nixpkgs> {}; +in + import pkgs.path { overlays = [(self: super: ...)]; } + + + + + Autoloading connection tracking helpers is now disabled by + default. This default was also changed in the Linux kernel and + is considered insecure if not configured properly in your + firewall. If you need connection tracking helpers (i.e. for + active FTP) please enable + networking.firewall.autoLoadConntrackHelpers + and tune + networking.firewall.connectionTrackingModules + to suit your needs. + + + + + local_recipient_maps is not set to empty + value by Postfix service. It's an insecure default as stated + by Postfix documentation. Those who want to retain this + setting need to set it via + services.postfix.extraConfig. + + + + + Iputils no longer provide ping6 and traceroute6. The + functionality of these tools has been integrated into ping and + traceroute respectively. To enforce an address family the new + flags -4 and -6 have + been added. One notable incompatibility is that specifying an + interface (for link-local IPv6 for instance) is no longer done + with the -I flag, but by encoding the + interface into the address + (ping fe80::1%eth0). + + + + + The socket handling of the services.rmilter + module has been fixed and refactored. As rmilter doesn't + support binding to more than one socket, the options + bindUnixSockets and + bindInetSockets have been replaced by + services.rmilter.bindSocket.*. The default + is still a unix socket in + /run/rmilter/rmilter.sock. Refer to the + options documentation for more information. + + + + + The fetch* functions no longer support md5, + please use sha256 instead. + + + + + The dnscrypt-proxy module interface has been streamlined + around the extraArgs option. Where + possible, legacy option declarations are mapped to + extraArgs but will emit warnings. The + resolverList has been outright removed: to + use an unlisted resolver, use the + customResolver option. + + + + + torbrowser now stores local state under + ~/.local/share/tor-browser by default. Any + browser profile data from the old location, + ~/.torbrowser4, must be migrated manually. + + + + + The ihaskell, monetdb, offlineimap and sitecopy services have + been removed. + + + +
+
+ Other Notable Changes + + + + Module type system have a new extensible option types feature + that allow to extend certain types, such as enum, through + multiple option declarations of the same option across + multiple modules. + + + + + jre now defaults to GTK UI by default. This + improves visual consistency and makes Java follow system font + style, improving the situation on HighDPI displays. This has a + cost of increased closure size; for server and other headless + workloads it's recommended to use + jre_headless. + + + + + Python 2.6 interpreter and package set have been removed. + + + + + The Python 2.7 interpreter does not use modules anymore. + Instead, all CPython interpreters now include the whole + standard library except for `tkinter`, which is available in + the Python package set. + + + + + Python 2.7, 3.5 and 3.6 are now built deterministically and + 3.4 mostly. Minor modifications had to be made to the + interpreters in order to generate deterministic bytecode. This + has security implications and is relevant for those using + Python in a nix-shell. See the Nixpkgs + manual for details. + + + + + The Python package sets now use a fixed-point combinator and + the sets are available as attributes of the interpreters. + + + + + The Python function buildPythonPackage has + been improved and can be used to build from Setuptools source, + Flit source, and precompiled Wheels. + + + + + When adding new or updating current Python libraries, the + expressions should be put in separate files in + pkgs/development/python-modules and called + from python-packages.nix. + + + + + The dnscrypt-proxy service supports synchronizing the list of + public resolvers without working DNS resolution. This fixes + issues caused by the resolver list becoming outdated. It also + improves the viability of DNSCrypt only configurations. + + + + + Containers using bridged networking no longer lose their + connection after changes to the host networking. + + + + + ZFS supports pool auto scrubbing. + + + + + The bind DNS utilities (e.g. dig) have been split into their + own output and are now also available in + pkgs.dnsutils and it is no longer necessary + to pull in all of bind to use them. + + + + + Per-user configuration was moved from + ~/.nixpkgs to + ~/.config/nixpkgs. The former is still + valid for config.nix for backwards + compatibility. + + + +
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1709.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1709.section.xml new file mode 100644 index 0000000000..8f0efe816e --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1709.section.xml @@ -0,0 +1,922 @@ +
+ Release 17.09 (<quote>Hummingbird</quote>, 2017/09/??) +
+ Highlights + + In addition to numerous new and upgraded packages, this release + has the following highlights: + + + + + The GNOME version is now 3.24. KDE Plasma was upgraded to + 5.10, KDE Applications to 17.08.1 and KDE Frameworks to 5.37. + + + + + The user handling now keeps track of deallocated UIDs/GIDs. + When a user or group is revived, this allows it to be + allocated the UID/GID it had before. A consequence is that + UIDs and GIDs are no longer reused. + + + + + The module option + services.xserver.xrandrHeads now causes the + first head specified in this list to be set as the primary + head. Apart from that, it's now possible to also set + additional options by using an attribute set, for example: + + +{ services.xserver.xrandrHeads = [ + "HDMI-0" + { + output = "DVI-0"; + primary = true; + monitorConfig = '' + Option "Rotate" "right" + ''; + } + ]; +} + + + This will set the DVI-0 output to be the + primary head, even though HDMI-0 is the + first head in the list. + + + + + The handling of SSL in the services.nginx + module has been cleaned up, renaming the misnamed + enableSSL to onlySSL + which reflects its original intention. This is not to be used + with the already existing forceSSL which + creates a second non-SSL virtual host redirecting to the SSL + virtual host. This by chance had worked earlier due to + specific implementation details. In case you had specified + both please remove the enableSSL option to + keep the previous behaviour. + + + Another addSSL option has been introduced + to configure both a non-SSL virtual host and an SSL virtual + host with the same configuration. + + + Options to configure resolver options and + upstream blocks have been introduced. See + their information for further details. + + + The port option has been replaced by a more + generic listen option which makes it + possible to specify multiple addresses, ports and SSL configs + dependant on the new SSL handling mentioned above. + + + +
+
+ New Services + + The following new services were added since the last release: + + + + + config/fonts/fontconfig-penultimate.nix + + + + + config/fonts/fontconfig-ultimate.nix + + + + + config/terminfo.nix + + + + + hardware/sensor/iio.nix + + + + + hardware/nitrokey.nix + + + + + hardware/raid/hpsa.nix + + + + + programs/browserpass.nix + + + + + programs/gnupg.nix + + + + + programs/qt5ct.nix + + + + + programs/slock.nix + + + + + programs/thefuck.nix + + + + + security/auditd.nix + + + + + security/lock-kernel-modules.nix + + + + + service-managers/docker.nix + + + + + service-managers/trivial.nix + + + + + services/admin/salt/master.nix + + + + + services/admin/salt/minion.nix + + + + + services/audio/slimserver.nix + + + + + services/cluster/kubernetes/default.nix + + + + + services/cluster/kubernetes/dns.nix + + + + + services/cluster/kubernetes/dashboard.nix + + + + + services/continuous-integration/hail.nix + + + + + services/databases/clickhouse.nix + + + + + services/databases/postage.nix + + + + + services/desktops/gnome3/gnome-disks.nix + + + + + services/desktops/gnome3/gpaste.nix + + + + + services/logging/SystemdJournal2Gelf.nix + + + + + services/logging/heartbeat.nix + + + + + services/logging/journalwatch.nix + + + + + services/logging/syslogd.nix + + + + + services/mail/mailhog.nix + + + + + services/mail/nullmailer.nix + + + + + services/misc/airsonic.nix + + + + + services/misc/autorandr.nix + + + + + services/misc/exhibitor.nix + + + + + services/misc/fstrim.nix + + + + + services/misc/gollum.nix + + + + + services/misc/irkerd.nix + + + + + services/misc/jackett.nix + + + + + services/misc/radarr.nix + + + + + services/misc/snapper.nix + + + + + services/monitoring/osquery.nix + + + + + services/monitoring/prometheus/collectd-exporter.nix + + + + + services/monitoring/prometheus/fritzbox-exporter.nix + + + + + services/network-filesystems/kbfs.nix + + + + + services/networking/dnscache.nix + + + + + services/networking/fireqos.nix + + + + + services/networking/iwd.nix + + + + + services/networking/keepalived/default.nix + + + + + services/networking/keybase.nix + + + + + services/networking/lldpd.nix + + + + + services/networking/matterbridge.nix + + + + + services/networking/squid.nix + + + + + services/networking/tinydns.nix + + + + + services/networking/xrdp.nix + + + + + services/security/shibboleth-sp.nix + + + + + services/security/sks.nix + + + + + services/security/sshguard.nix + + + + + services/security/torify.nix + + + + + services/security/usbguard.nix + + + + + services/security/vault.nix + + + + + services/system/earlyoom.nix + + + + + services/system/saslauthd.nix + + + + + services/web-apps/nexus.nix + + + + + services/web-apps/pgpkeyserver-lite.nix + + + + + services/web-apps/piwik.nix + + + + + services/web-servers/lighttpd/collectd.nix + + + + + services/web-servers/minio.nix + + + + + services/x11/display-managers/xpra.nix + + + + + services/x11/xautolock.nix + + + + + tasks/filesystems/bcachefs.nix + + + + + tasks/powertop.nix + + + +
+
+ Backward Incompatibilities + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + In an Qemu-based virtualization + environment, the network interface names changed from i.e. + enp0s3 to + ens3. + + + This is due to a kernel configuration change. The new naming + is consistent with those of other Linux distributions with + systemd. See + #29197 + for more information. + + + A machine is affected if the virt-what tool + either returns qemu or + kvm and has interface + names used in any part of its NixOS configuration, in + particular if a static network configuration with + networking.interfaces is used. + + + Before rebooting affected machines, please ensure: + + + + + Change the interface names in your NixOS configuration. + The first interface will be called + ens3, the second one + ens8 and starting from there + incremented by 1. + + + + + After changing the interface names, rebuild your system + with nixos-rebuild boot to activate the + new configuration after a reboot. If you switch to the new + configuration right away you might lose network + connectivity! If using nixops, deploy + with nixops deploy --force-reboot. + + + + + + + The following changes apply if the + stateVersion is changed to 17.09 or higher. + For stateVersion = "17.03" or + lower the old behavior is preserved. + + + + + The postgres default version was + changed from 9.5 to 9.6. + + + + + The postgres superuser name has changed + from root to + postgres to more closely follow what + other Linux distributions are doing. + + + + + The postgres default + dataDir has changed from + /var/db/postgres to + /var/lib/postgresql/$psqlSchema where + $psqlSchema is 9.6 for example. + + + + + The mysql default + dataDir has changed from + /var/mysql to + /var/lib/mysql. + + + + + Radicale's default package has changed from 1.x to 2.x. + Instructions to migrate can be found + here + . It is also possible to use the newer version by + setting the package to + radicale2, which is done automatically + when stateVersion is 17.09 or higher. + The extraArgs option has been added to + allow passing the data migration arguments specified in + the instructions; see the radicale.nix + NixOS test for an example migration. + + + + + + + The aiccu package was removed. This is due + to SixXS + sunsetting its IPv6 tunnel. + + + + + The fanctl package and + fan module have been removed due to the + developers not upstreaming their iproute2 patches and lagging + with compatibility to recent iproute2 versions. + + + + + Top-level idea package collection was + renamed. All JetBrains IDEs are now at + jetbrains. + + + + + flexget's state database cannot be upgraded + to its new internal format, requiring removal of any existing + db-config.sqlite which will be + automatically recreated. + + + + + The ipfs service now doesn't ignore the + dataDir option anymore. If you've ever set + this option to anything other than the default you'll have to + either unset it (so the default gets used) or migrate the old + data manually with + + +dataDir=<valueOfDataDir> +mv /var/lib/ipfs/.ipfs/* $dataDir +rmdir /var/lib/ipfs/.ipfs + + + + + The caddy service was previously using an + extra .caddy directory in the data + directory specified with the dataDir + option. The contents of the .caddy + directory are now expected to be in the + dataDir. + + + + + The ssh-agent user service is not started + by default anymore. Use + programs.ssh.startAgent to enable it if + needed. There is also a new + programs.gnupg.agent module that creates a + gpg-agent user service. It can also serve + as a SSH agent if enableSSHSupport is set. + + + + + The + services.tinc.networks.<name>.listenAddress + option had a misleading name that did not correspond to its + behavior. It now correctly defines the ip to listen for + incoming connections on. To keep the previous behaviour, use + services.tinc.networks.<name>.bindToAddress + instead. Refer to the description of the options for more + details. + + + + + tlsdate package and module were removed. + This is due to the project being dead and not building with + openssl 1.1. + + + + + wvdial package and module were removed. + This is due to the project being dead and not building with + openssl 1.1. + + + + + cc-wrapper's setup-hook now exports a + number of environment variables corresponding to binutils + binaries, (e.g. LD, + STRIP, RANLIB, etc). + This is done to prevent packages' build systems guessing, + which is harder to predict, especially when cross-compiling. + However, some packages have broken due to this—their build + systems either not supporting, or claiming to support without + adequate testing, taking such environment variables as + parameters. + + + + + services.firefox.syncserver now runs by + default as a non-root user. To accomodate this change, the + default sqlite database location has also been changed. + Migration should work automatically. Refer to the description + of the options for more details. + + + + + The compiz window manager and package was + removed. The system support had been broken for several years. + + + + + Touchpad support should now be enabled through + libinput as synaptics is + now deprecated. See the option + services.xserver.libinput.enable. + + + + + grsecurity/PaX support has been dropped, following upstream's + decision to cease free support. See + + upstream's announcement for more information. No + complete replacement for grsecurity/PaX is available + presently. + + + + + services.mysql now has declarative + configuration of databases and users with the + ensureDatabases and + ensureUsers options. + + + These options will never delete existing databases and users, + especially not when the value of the options are changed. + + + The MySQL users will be identified using + + Unix socket authentication. This authenticates the Unix + user with the same name only, and that without the need for a + password. + + + If you have previously created a MySQL root + user with a password, you will need to + add root user for unix socket + authentication before using the new options. This can be done + by running the following SQL script: + + +CREATE USER 'root'@'%' IDENTIFIED BY ''; +GRANT ALL PRIVILEGES ON *.* TO 'root'@'%' WITH GRANT OPTION; +FLUSH PRIVILEGES; + +-- Optionally, delete the password-authenticated user: +-- DROP USER 'root'@'localhost'; + + + + + services.mysqlBackup now works by default + without any user setup, including for users other than + mysql. + + + By default, the mysql user is no longer the + user which performs the backup. Instead a system account + mysqlbackup is used. + + + The mysqlBackup service is also now using + systemd timers instead of cron. + + + Therefore, the services.mysqlBackup.period + option no longer exists, and has been replaced with + services.mysqlBackup.calendar, which is in + the format of + systemd.time(7). + + + If you expect to be sent an e-mail when the backup fails, + consider using a script which monitors the systemd journal for + errors. Regretfully, at present there is no built-in + functionality for this. + + + You can check that backups still work by running + systemctl start mysql-backup then + systemctl status mysql-backup. + + + + + Templated systemd services e.g + container@name are now handled currectly + when switching to a new configuration, resulting in them being + reloaded. + + + + + Steam: the newStdcpp parameter was removed + and should not be needed anymore. + + + + + Redis has been updated to version 4 which mandates a cluster + mass-restart, due to changes in the network handling, in order + to ensure compatibility with networks NATing traffic. + + + +
+
+ Other Notable Changes + + + + Modules can now be disabled by using + + disabledModules, allowing another to take it's place. + This can be used to import a set of modules from another + channel while keeping the rest of the system on a stable + release. + + + + + Updated to FreeType 2.7.1, including a new TrueType engine. + The new engine replaces the Infinality engine which was the + default in NixOS. The default font rendering settings are now + provided by fontconfig-penultimate, replacing + fontconfig-ultimate; the new defaults are less invasive and + provide rendering that is more consistent with other systems + and hopefully with each font designer's intent. Some + system-wide configuration has been removed from the Fontconfig + NixOS module where user Fontconfig settings are available. + + + + + ZFS/SPL have been updated to 0.7.0, + zfsUnstable, splUnstable have therefore + been removed. + + + + + The time.timeZone option now allows the + value null in addition to timezone strings. + This value allows changing the timezone of a system + imperatively using + timedatectl set-timezone. The default + timezone is still UTC. + + + + + Nixpkgs overlays may now be specified with a file as well as a + directory. The value of + <nixpkgs-overlays> may be a file, and + ~/.config/nixpkgs/overlays.nix can be used + instead of the ~/.config/nixpkgs/overlays + directory. + + + See the overlays chapter of the Nixpkgs manual for more + details. + + + + + Definitions for /etc/hosts can now be + specified declaratively with + networking.hosts. + + + + + Two new options have been added to the installer loader, in + addition to the default having changed. The kernel log + verbosity has been lowered to the upstream default for the + default options, in order to not spam the console when e.g. + joining a network. + + + This therefore leads to adding a new debug + option to set the log level to the previous verbose mode, to + make debugging easier, but still accessible easily. + + + Additionally a copytoram option has been + added, which makes it possible to remove the install medium + after booting. This allows tethering from your phone after + booting from it. + + + + + services.gitlab-runner.configOptions has + been added to specify the configuration of gitlab-runners + declaratively. + + + + + services.jenkins.plugins has been added to + install plugins easily, this can be generated with + jenkinsPlugins2nix. + + + + + services.postfix.config has been added to + specify the main.cf with NixOS options. Additionally other + options have been added to the postfix module and has been + improved further. + + + + + The GitLab package and module have been updated to the latest + 10.0 release. + + + + + The systemd-boot boot loader now lists the + NixOS version, kernel version and build date of all bootable + generations. + + + + + The dnscrypt-proxy service now defaults to using a random + upstream resolver, selected from the list of public + non-logging resolvers with DNSSEC support. Existing + configurations can be migrated to this mode of operation by + omitting the + services.dnscrypt-proxy.resolverName option + or setting it to "random". + + + +
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1803.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1803.section.xml new file mode 100644 index 0000000000..f54f6129e0 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1803.section.xml @@ -0,0 +1,871 @@ +
+ Release 18.03 (<quote>Impala</quote>, 2018/04/04) +
+ Highlights + + In addition to numerous new and upgraded packages, this release + has the following highlights: + + + + + End of support is planned for end of October 2018, handing + over to 18.09. + + + + + Platform support: x86_64-linux and x86_64-darwin since release + time (the latter isn't NixOS, really). Binaries for + aarch64-linux are available, but no channel exists yet, as + it's waiting for some test fixes, etc. + + + + + Nix now defaults to 2.0; see its + release + notes. + + + + + Core version changes: linux: 4.9 -> 4.14, glibc: 2.25 -> + 2.26, gcc: 6 -> 7, systemd: 234 -> 237. + + + + + Desktop version changes: gnome: 3.24 -> 3.26, (KDE) + plasma-desktop: 5.10 -> 5.12. + + + + + MariaDB 10.2, updated from 10.1, is now the default MySQL + implementation. While upgrading a few changes have been made + to the infrastructure involved: + + + + + libmysql has been deprecated, please + use mysql.connector-c instead, a + compatibility passthru has been added to the MySQL + packages. + + + + + The mysql57 package has a new + static output containing the static + libraries including libmysqld.a + + + + + + + PHP now defaults to PHP 7.2, updated from 7.1. + + + +
+
+ New Services + + The following new services were added since the last release: + + + + + ./config/krb5/default.nix + + + + + ./hardware/digitalbitbox.nix + + + + + ./misc/label.nix + + + + + ./programs/ccache.nix + + + + + ./programs/criu.nix + + + + + ./programs/digitalbitbox/default.nix + + + + + ./programs/less.nix + + + + + ./programs/npm.nix + + + + + ./programs/plotinus.nix + + + + + ./programs/rootston.nix + + + + + ./programs/systemtap.nix + + + + + ./programs/sway.nix + + + + + ./programs/udevil.nix + + + + + ./programs/way-cooler.nix + + + + + ./programs/yabar.nix + + + + + ./programs/zsh/zsh-autoenv.nix + + + + + ./services/backup/borgbackup.nix + + + + + ./services/backup/crashplan-small-business.nix + + + + + ./services/desktops/dleyna-renderer.nix + + + + + ./services/desktops/dleyna-server.nix + + + + + ./services/desktops/pipewire.nix + + + + + ./services/desktops/gnome3/chrome-gnome-shell.nix + + + + + ./services/desktops/gnome3/tracker-miners.nix + + + + + ./services/hardware/fwupd.nix + + + + + ./services/hardware/interception-tools.nix + + + + + ./services/hardware/u2f.nix + + + + + ./services/hardware/usbmuxd.nix + + + + + ./services/mail/clamsmtp.nix + + + + + ./services/mail/dkimproxy-out.nix + + + + + ./services/mail/pfix-srsd.nix + + + + + ./services/misc/gitea.nix + + + + + ./services/misc/home-assistant.nix + + + + + ./services/misc/ihaskell.nix + + + + + ./services/misc/logkeys.nix + + + + + ./services/misc/novacomd.nix + + + + + ./services/misc/osrm.nix + + + + + ./services/misc/plexpy.nix + + + + + ./services/misc/pykms.nix + + + + + ./services/misc/tzupdate.nix + + + + + ./services/monitoring/fusion-inventory.nix + + + + + ./services/monitoring/prometheus/exporters.nix + + + + + ./services/network-filesystems/beegfs.nix + + + + + ./services/network-filesystems/davfs2.nix + + + + + ./services/network-filesystems/openafs/client.nix + + + + + ./services/network-filesystems/openafs/server.nix + + + + + ./services/network-filesystems/ceph.nix + + + + + ./services/networking/aria2.nix + + + + + ./services/networking/monero.nix + + + + + ./services/networking/nghttpx/default.nix + + + + + ./services/networking/nixops-dns.nix + + + + + ./services/networking/rxe.nix + + + + + ./services/networking/stunnel.nix + + + + + ./services/web-apps/matomo.nix + + + + + ./services/web-apps/restya-board.nix + + + + + ./services/web-servers/mighttpd2.nix + + + + + ./services/x11/fractalart.nix + + + + + ./system/boot/binfmt.nix + + + + + ./system/boot/grow-partition.nix + + + + + ./tasks/filesystems/ecryptfs.nix + + + + + ./virtualisation/hyperv-guest.nix + + + +
+
+ Backward Incompatibilities + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + sound.enable now defaults to false. + + + + + Dollar signs in options under + services.postfix are passed verbatim to + Postfix, which will interpret them as the beginning of a + parameter expression. This was already true for string-valued + options in the previous release, but not for list-valued + options. If you need to pass literal dollar signs through + Postfix, double them. + + + + + The postage package (for web-based + PostgreSQL administration) has been renamed to + pgmanage. The corresponding module has also + been renamed. To migrate please rename all + services.postage options to + services.pgmanage. + + + + + Package attributes starting with a digit have been prefixed + with an underscore sign. This is to avoid quoting in the + configuration and other issues with command-line tools like + nix-env. The change affects the following + packages: + + + + + 2048-in-terminal → + _2048-in-terminal + + + + + 90secondportraits → + _90secondportraits + + + + + 2bwm → _2bwm + + + + + 389-ds-base → + _389-ds-base + + + + + + + The OpenSSH service no longer enables + support for DSA keys by default, which could cause a system + lock out. Update your keys or, unfavorably, re-enable DSA + support manually. + + + DSA support was + deprecated + in OpenSSH 7.0, due to it being too weak. To re-enable + support, add + PubkeyAcceptedKeyTypes +ssh-dss to the end + of your services.openssh.extraConfig. + + + After updating the keys to be stronger, anyone still on a + pre-17.03 version is safe to jump to 17.03, as vetted + here. + + + + + The openssh package now includes Kerberos + support by default; the + openssh_with_kerberos package is now a + deprecated alias. If you do not want Kerberos support, you can + do + openssh.override { withKerberos = false; }. + Note, this also applies to the openssh_hpn + package. + + + + + cc-wrapper has been split in two; there is + now also a bintools-wrapper. The most + commonly used files in nix-support are now + split between the two wrappers. Some commonly used ones, like + nix-support/dynamic-linker, are duplicated + for backwards compatability, even though they rightly belong + only in bintools-wrapper. Other more + obscure ones are just moved. + + + + + The propagation logic has been changed. The new logic, along + with new types of dependencies that go with, is thoroughly + documented in the "Specifying dependencies" section + of the "Standard Environment" chapter of the nixpkgs + manual. The old logic isn't but is easy to describe: + dependencies were propagated as the same type of dependency no + matter what. In practice, that means that many + propagatedNativeBuildInputs should instead + be propagatedBuildInputs. Thankfully, that + was and is the least used type of dependency. Also, it means + that some propagatedBuildInputs should + instead be depsTargetTargetPropagated. + Other types dependencies should be unaffected. + + + + + lib.addPassthru drv passthru is removed. + Use lib.extendDerivation true passthru drv + instead. + + + + + The memcached service no longer accept + dynamic socket paths via + services.memcached.socket. Unix sockets can + be still enabled by + services.memcached.enableUnixSocket and + will be accessible at + /run/memcached/memcached.sock. + + + + + The hardware.amdHybridGraphics.disable + option was removed for lack of a maintainer. If you still need + this module, you may wish to include a copy of it from an + older version of nixos in your imports. + + + + + The merging of config options for + services.postfix.config was buggy. + Previously, if other options in the Postfix module like + services.postfix.useSrs were set and the + user set config options that were also set by such options, + the resulting config wouldn't include all options that were + needed. They are now merged correctly. If config options need + to be overridden, lib.mkForce or + lib.mkOverride can be used. + + + + + The following changes apply if the + stateVersion is changed to 18.03 or higher. + For stateVersion = "17.09" or + lower the old behavior is preserved. + + + + + matrix-synapse uses postgresql by + default instead of sqlite. Migration instructions can be + found + + here . + + + + + + + The jid package has been removed, due to + maintenance overhead of a go package having non-versioned + dependencies. + + + + + When using services.xserver.libinput + (enabled by default in GNOME), it now handles all input + devices, not just touchpads. As a result, you might need to + re-evaluate any custom Xorg configuration. In particular, + Option "XkbRules" "base" + may result in broken keyboard layout. + + + + + The attic package was removed. A maintained + fork called + Borg + should be used instead. Migration instructions can be found + here. + + + + + The Piwik analytics software was renamed to Matomo: + + + + + The package pkgs.piwik was renamed to + pkgs.matomo. + + + + + The service services.piwik was renamed + to services.matomo. + + + + + The data directory /var/lib/piwik was + renamed to /var/lib/matomo. All files + will be moved automatically on first startup, but you + might need to adjust your backup scripts. + + + + + The default serverName for the nginx + configuration changed from + piwik.${config.networking.hostName} to + matomo.${config.networking.hostName}.${config.networking.domain} + if config.networking.domain is set, + matomo.${config.networking.hostName} if + it is not set. If you change your + serverName, remember you'll need to + update the trustedHosts[] array in + /var/lib/matomo/config/config.ini.php + as well. + + + + + The piwik user was renamed to + matomo. The service will adjust + ownership automatically for files in the data directory. + If you use unix socket authentication, remember to give + the new matomo user access to the + database and to change the username to + matomo in the + [database] section of + /var/lib/matomo/config/config.ini.php. + + + + + If you named your database `piwik`, you might want to + rename it to `matomo` to keep things clean, but this is + neither enforced nor required. + + + + + + + nodejs-4_x is end-of-life. + nodejs-4_x, + nodejs-slim-4_x and + nodePackages_4_x are removed. + + + + + The pump.io NixOS module was removed. It is + now maintained as an + external + module. + + + + + The Prosody XMPP server has received a major update. The + following modules were renamed: + + + + + services.prosody.modules.httpserver is + now services.prosody.modules.http_files + + + + + services.prosody.modules.console is now + services.prosody.modules.admin_telnet + + + + + Many new modules are now core modules, most notably + services.prosody.modules.carbons and + services.prosody.modules.mam. + + + The better-performing libevent backend is + now enabled by default. + + + withCommunityModules now passes through the + modules to services.prosody.extraModules. + Use withOnlyInstalledCommunityModules for + modules that should not be enabled directly, e.g + lib_ldap. + + + + + All prometheus exporter modules are now defined as submodules. + The exporters are configured using + services.prometheus.exporters. + + + +
+
+ Other Notable Changes + + + + ZNC option services.znc.mutable now + defaults to true. That means that old + configuration is not overwritten by default when update to the + znc options are made. + + + + + The option + networking.wireless.networks.<name>.auth + has been added for wireless networks with WPA-Enterprise + authentication. There is also a new + extraConfig option to directly configure + wpa_supplicant and + hidden to connect to hidden networks. + + + + + In the module + networking.interfaces.<name> the + following options have been removed: + + + + + ipAddress + + + + + ipv6Address + + + + + prefixLength + + + + + ipv6PrefixLength + + + + + subnetMask + + + + + To assign static addresses to an interface the options + ipv4.addresses and + ipv6.addresses should be used instead. The + options ip4 and ip6 have + been renamed to ipv4.addresses + ipv6.addresses respectively. The new + options ipv4.routes and + ipv6.routes have been added to set up + static routing. + + + + + The option services.logstash.listenAddress + is now 127.0.0.1 by default. Previously the + default behaviour was to listen on all interfaces. + + + + + services.btrfs.autoScrub has been added, to + periodically check btrfs filesystems for data corruption. If + there's a correct copy available, it will automatically repair + corrupted blocks. + + + + + displayManager.lightdm.greeters.gtk.clock-format. + has been added, the clock format string (as expected by + strftime, e.g. %H:%M) to use with the + lightdm gtk greeter panel. + + + If set to null the default clock format is used. + + + + + displayManager.lightdm.greeters.gtk.indicators + has been added, a list of allowed indicator modules to use + with the lightdm gtk greeter panel. + + + Built-in indicators include ~a11y, + ~language, ~session, + ~power, ~clock, + ~host, ~spacer. Unity + indicators can be represented by short name (e.g. + sound, power), service + file name, or absolute path. + + + If set to null the default indicators are + used. + + + In order to have the previous default configuration add + + +{ + services.xserver.displayManager.lightdm.greeters.gtk.indicators = [ + "~host" "~spacer" + "~clock" "~spacer" + "~session" + "~language" + "~a11y" + "~power" + ]; +} + + + to your configuration.nix. + + + + + The NixOS test driver supports user services declared by + systemd.user.services. The methods + waitForUnit, + getUnitInfo, startJob + and stopJob provide an optional + $user argument for that purpose. + + + + + Enabling bash completion on NixOS, + programs.bash.enableCompletion, will now + also enable completion for the Nix command line tools by + installing the + nix-bash-completions + package. + + + +
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1809.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1809.section.xml new file mode 100644 index 0000000000..aa4637a99b --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1809.section.xml @@ -0,0 +1,941 @@ +
+ Release 18.09 (<quote>Jellyfish</quote>, 2018/10/05) +
+ Highlights + + In addition to numerous new and upgraded packages, this release + has the following notable updates: + + + + + End of support is planned for end of April 2019, handing over + to 19.03. + + + + + Platform support: x86_64-linux and x86_64-darwin as always. + Support for aarch64-linux is as with the previous releases, + not equivalent to the x86-64-linux release, but with efforts + to reach parity. + + + + + Nix has been updated to 2.1; see its + release + notes. + + + + + Core versions: linux: 4.14 LTS (unchanged), glibc: 2.26 → + 2.27, gcc: 7 (unchanged), systemd: 237 → 239. + + + + + Desktop version changes: gnome: 3.26 → 3.28, (KDE) + plasma-desktop: 5.12 → 5.13. + + + + + Notable changes and additions for 18.09 include: + + + + + Support for wrapping binaries using + firejail has been added through + programs.firejail.wrappedBinaries. + + + For example + + +{ + programs.firejail = { + enable = true; + wrappedBinaries = { + firefox = "${lib.getBin pkgs.firefox}/bin/firefox"; + mpv = "${lib.getBin pkgs.mpv}/bin/mpv"; + }; + }; +} + + + This will place firefox and + mpv binaries in the global path wrapped by + firejail. + + + + + User channels are now in the default + NIX_PATH, allowing users to use their + personal nix-channel defined channels in + nix-build and nix-shell + commands, as well as in imports like + import <mychannel>. + + + For example + + +$ nix-channel --add https://nixos.org/channels/nixpkgs-unstable nixpkgsunstable +$ nix-channel --update +$ nix-build '<nixpkgsunstable>' -A gitFull +$ nix run -f '<nixpkgsunstable>' gitFull +$ nix-instantiate -E '(import <nixpkgsunstable> {}).gitFull' + + + +
+
+ New Services + + A curated selection of new services that were added since the last + release: + + + + + The services.cassandra module has been + reworked and was rewritten from scratch. The service has + succeeding tests for the versions 2.1, 2.2, 3.0 and 3.11 of + Apache + Cassandra. + + + + + There is a new services.foundationdb module + for deploying + FoundationDB + clusters. + + + + + When enabled the iproute2 will copy the + files expected by ip route (e.g., + rt_tables) in + /etc/iproute2. This allows to write aliases + for routing tables for instance. + + + + + services.strongswan-swanctl is a modern + replacement for services.strongswan. You + can use either one of them to setup IPsec VPNs but not both at + the same time. + + + services.strongswan-swanctl uses the + swanctl + command which uses the modern + vici + Versatile IKE Configuration Interface. + The deprecated ipsec command used in + services.strongswan is using the legacy + stroke + configuration interface. + + + + + The new services.elasticsearch-curator + service periodically curates or manages, your Elasticsearch + indices and snapshots. + + + + + Every new services: + + + + + ./config/xdg/autostart.nix + + + + + ./config/xdg/icons.nix + + + + + ./config/xdg/menus.nix + + + + + ./config/xdg/mime.nix + + + + + ./hardware/brightnessctl.nix + + + + + ./hardware/onlykey.nix + + + + + ./hardware/video/uvcvideo/default.nix + + + + + ./misc/documentation.nix + + + + + ./programs/firejail.nix + + + + + ./programs/iftop.nix + + + + + ./programs/sedutil.nix + + + + + ./programs/singularity.nix + + + + + ./programs/xss-lock.nix + + + + + ./programs/zsh/zsh-autosuggestions.nix + + + + + ./services/admin/oxidized.nix + + + + + ./services/backup/duplicati.nix + + + + + ./services/backup/restic.nix + + + + + ./services/backup/restic-rest-server.nix + + + + + ./services/cluster/hadoop/default.nix + + + + + ./services/databases/aerospike.nix + + + + + ./services/databases/monetdb.nix + + + + + ./services/desktops/bamf.nix + + + + + ./services/desktops/flatpak.nix + + + + + ./services/desktops/zeitgeist.nix + + + + + ./services/development/bloop.nix + + + + + ./services/development/jupyter/default.nix + + + + + ./services/hardware/lcd.nix + + + + + ./services/hardware/undervolt.nix + + + + + ./services/misc/clipmenu.nix + + + + + ./services/misc/gitweb.nix + + + + + ./services/misc/serviio.nix + + + + + ./services/misc/safeeyes.nix + + + + + ./services/misc/sysprof.nix + + + + + ./services/misc/weechat.nix + + + + + ./services/monitoring/datadog-agent.nix + + + + + ./services/monitoring/incron.nix + + + + + ./services/networking/dnsdist.nix + + + + + ./services/networking/freeradius.nix + + + + + ./services/networking/hans.nix + + + + + ./services/networking/morty.nix + + + + + ./services/networking/ndppd.nix + + + + + ./services/networking/ocserv.nix + + + + + ./services/networking/owamp.nix + + + + + ./services/networking/quagga.nix + + + + + ./services/networking/shadowsocks.nix + + + + + ./services/networking/stubby.nix + + + + + ./services/networking/zeronet.nix + + + + + ./services/security/certmgr.nix + + + + + ./services/security/cfssl.nix + + + + + ./services/security/oauth2_proxy_nginx.nix + + + + + ./services/web-apps/virtlyst.nix + + + + + ./services/web-apps/youtrack.nix + + + + + ./services/web-servers/hitch/default.nix + + + + + ./services/web-servers/hydron.nix + + + + + ./services/web-servers/meguca.nix + + + + + ./services/web-servers/nginx/gitweb.nix + + + + + ./virtualisation/kvmgt.nix + + + + + ./virtualisation/qemu-guest-agent.nix + + + +
+
+ Backward Incompatibilities + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + Some licenses that were incorrectly not marked as unfree now + are. This is the case for: + + + + + cc-by-nc-sa-20: Creative Commons Attribution Non + Commercial Share Alike 2.0 + + + + + cc-by-nc-sa-25: Creative Commons Attribution Non + Commercial Share Alike 2.5 + + + + + cc-by-nc-sa-30: Creative Commons Attribution Non + Commercial Share Alike 3.0 + + + + + cc-by-nc-sa-40: Creative Commons Attribution Non + Commercial Share Alike 4.0 + + + + + cc-by-nd-30: Creative Commons Attribution-No Derivative + Works v3.00 + + + + + msrla: Microsoft Research License Agreement + + + + + + + The deprecated services.cassandra module + has seen a complete rewrite. (See above.) + + + + + lib.strict is removed. Use + builtins.seq instead. + + + + + The clementine package points now to the + free derivation. clementineFree is removed + now and clementineUnfree points to the + package which is bundled with the unfree + libspotify package. + + + + + The netcat package is now taken directly + from OpenBSD's libressl, instead of relying + on Debian's fork. The new version should be very close to the + old version, but there are some minor differences. + Importantly, flags like -b, -q, -C, and -Z are no longer + accepted by the nc command. + + + + + The services.docker-registry.extraConfig + object doesn't contain environment variables anymore. Instead + it needs to provide an object structure that can be mapped + onto the YAML configuration defined in + the + docker/distribution docs. + + + + + gnucash has changed from version 2.4 to + 3.x. If you've been using gnucash (version + 2.4) instead of gnucash26 (version 2.6) you + must open your Gnucash data file(s) with + gnucash26 and then save them to upgrade the + file format. Then you may use your data file(s) with Gnucash + 3.x. See the upgrade + documentation. + Gnucash 2.4 is still available under the attribute + gnucash24. + + + + + services.munge now runs as user (and group) + munge instead of root. Make sure the key + file is accessible to the daemon. + + + + + dockerTools.buildImage now uses + null as default value for + tag, which indicates that the nix output + hash will be used as tag. + + + + + The ELK stack: elasticsearch, + logstash and kibana has + been upgraded from 2.* to 6.3.*. The 2.* versions have been + unsupported + since last year so they have been removed. You can + still use the 5.* versions under the names + elasticsearch5, + logstash5 and kibana5. + + + The elastic beats: filebeat, + heartbeat, metricbeat + and packetbeat have had the same treatment: + they now target 6.3.* as well. The 5.* versions are available + under the names: filebeat5, + heartbeat5, metricbeat5 + and packetbeat5 + + + The ELK-6.3 stack now comes with + X-Pack + by default. Since X-Pack is licensed under the + Elastic + License the ELK packages now have an unfree license. To + use them you need to specify + allowUnfree = true; in your nixpkgs + configuration. + + + Fortunately there is also a free variant of the ELK stack + without X-Pack. The packages are available under the names: + elasticsearch-oss, + logstash-oss and + kibana-oss. + + + + + Options + boot.initrd.luks.devices.name.yubikey.ramfsMountPoint + boot.initrd.luks.devices.name.yubikey.storage.mountPoint + were removed. luksroot.nix module never + supported more than one YubiKey at a time anyway, hence those + options never had any effect. You should be able to remove + them from your config without any issues. + + + + + stdenv.system and system + in nixpkgs now refer to the host platform instead of the build + platform. For native builds this is not change, let alone a + breaking one. For cross builds, it is a breaking change, and + stdenv.buildPlatform.system can be used + instead for the old behavior. They should be using that + anyways for clarity. + + + + + Groups kvm and render + are introduced now, as systemd requires them. + + + +
+
+ Other Notable Changes + + + + dockerTools.pullImage relies on image + digest instead of image tag to download the image. The + sha256 of a pulled image has to be updated. + + + + + lib.attrNamesToStr has been deprecated. Use + more specific concatenation + (lib.concat(Map)StringsSep) instead. + + + + + lib.addErrorContextToAttrs has been + deprecated. Use builtins.addErrorContext + directly. + + + + + lib.showVal has been deprecated. Use + lib.traceSeqN instead. + + + + + lib.traceXMLVal has been deprecated. Use + lib.traceValFn builtins.toXml instead. + + + + + lib.traceXMLValMarked has been deprecated. + Use + lib.traceValFn (x: str + builtins.toXML x) + instead. + + + + + The pkgs argument to NixOS modules can now + be set directly using nixpkgs.pkgs. + Previously, only the system, + config and overlays + arguments could be used to influence pkgs. + + + + + A NixOS system can now be constructed more easily based on a + preexisting invocation of Nixpkgs. For example: + + +{ + inherit (pkgs.nixos { + boot.loader.grub.enable = false; + fileSystems."/".device = "/dev/xvda1"; + }) toplevel kernel initialRamdisk manual; +} + + + This benefits evaluation performance, lets you write Nixpkgs + packages that depend on NixOS images and is consistent with a + deployment architecture that would be centered around Nixpkgs + overlays. + + + + + lib.traceValIfNot has been deprecated. Use + if/then/else and + lib.traceValSeq instead. + + + + + lib.traceCallXml has been deprecated. + Please complain if you use the function regularly. + + + + + The attribute lib.nixpkgsVersion has been + deprecated in favor of lib.version. Please + refer to the discussion in + NixOS/nixpkgs#39416 + for further reference. + + + + + lib.recursiveUpdateUntil was not acting + according to its specification. It has been fixed to act + according to the docstring, and a test has been added. + + + + + The module for security.dhparams has two + new options now: + + + + + security.dhparams.stateless + + + + Puts the generated Diffie-Hellman parameters into the + Nix store instead of managing them in a stateful manner + in /var/lib/dhparams. + + + + + + security.dhparams.defaultBitSize + + + + The default bit size to use for the generated + Diffie-Hellman parameters. + + + + + + + The path to the actual generated parameter files should now + be queried using + config.security.dhparams.params.name.path + because it might be either in the Nix store or in a + directory configured by + security.dhparams.path. + + + + + For developers: + + + Module implementers should not set a specific bit size in + order to let users configure it by themselves if they want + to have a different bit size than the default (2048). + + + An example usage of this would be: + + +{ config, ... }: + +{ + security.dhparams.params.myservice = {}; + environment.etc."myservice.conf".text = '' + dhparams = ${config.security.dhparams.params.myservice.path} + ''; +} + + + + + + networking.networkmanager.useDnsmasq has + been deprecated. Use + networking.networkmanager.dns instead. + + + + + The Kubernetes package has been bumped to major version 1.11. + Please consult the + release + notes for details on new features and api changes. + + + + + The option + services.kubernetes.apiserver.admissionControl + was renamed to + services.kubernetes.apiserver.enableAdmissionPlugins. + + + + + Recommended way to access the Kubernetes Dashboard is via + HTTPS (TLS) Therefore; public service port for the dashboard + has changed to 443 (container port 8443) and scheme to https. + + + + + The option + services.kubernetes.apiserver.address was + renamed to + services.kubernetes.apiserver.bindAddress. + Note that the default value has changed from 127.0.0.1 to + 0.0.0.0. + + + + + The option + services.kubernetes.apiserver.publicAddress + was not used and thus has been removed. + + + + + The option + services.kubernetes.addons.dashboard.enableRBAC + was renamed to + services.kubernetes.addons.dashboard.rbac.enable. + + + + + The Kubernetes Dashboard now has only minimal RBAC permissions + by default. If dashboard cluster-admin rights are desired, set + services.kubernetes.addons.dashboard.rbac.clusterAdmin + to true. On existing clusters, in order for the revocation of + privileges to take effect, the current ClusterRoleBinding for + kubernetes-dashboard must be manually removed: + kubectl delete clusterrolebinding kubernetes-dashboard + + + + + The programs.screen module provides allows + to configure /etc/screenrc, however the + module behaved fairly counterintuitive as the config exists, + but the package wasn't available. Since 18.09 + pkgs.screen will be added to + environment.systemPackages. + + + + + The module services.networking.hostapd now + uses WPA2 by default. + + + + + s6Dns, s6Networking, + s6LinuxUtils and + s6PortableUtils renamed to + s6-dns, s6-networking, + s6-linux-utils and + s6-portable-utils respectively. + + + + + The module option nix.useSandbox is now + defaulted to true. + + + + + The config activation script of + nixos-rebuild now + reloads + all user units for each authenticated user. + + + + + The default display manager is now LightDM. To use SLiM set + services.xserver.displayManager.slim.enable + to true. + + + + + NixOS option descriptions are now automatically broken up into + individual paragraphs if the text contains two consecutive + newlines, so it's no longer necessary to use + </para><para> to start a new + paragraph. + + + + + Top-level buildPlatform, + hostPlatform, and + targetPlatform in Nixpkgs are deprecated. + Please use their equivalents in stdenv + instead: stdenv.buildPlatform, + stdenv.hostPlatform, and + stdenv.targetPlatform. + + + +
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1903.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1903.section.xml new file mode 100644 index 0000000000..f26e68e132 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1903.section.xml @@ -0,0 +1,790 @@ +
+ Release 19.03 (<quote>Koi</quote>, 2019/04/11) +
+ Highlights + + In addition to numerous new and upgraded packages, this release + has the following highlights: + + + + + End of support is planned for end of October 2019, handing + over to 19.09. + + + + + The default Python 3 interpreter is now CPython 3.7 instead of + CPython 3.6. + + + + + Added the Pantheon desktop environment. It can be enabled + through + services.xserver.desktopManager.pantheon.enable. + + + + By default, + services.xserver.desktopManager.pantheon + enables LightDM as a display manager, as pantheon's screen + locking implementation relies on it. Because of that it is + recommended to leave LightDM enabled. If you'd like to + disable it anyway, set + services.xserver.displayManager.lightdm.enable + to false and enable your preferred + display manager. + + + + Also note that Pantheon's LightDM greeter is not enabled by + default, because it has numerous issues in NixOS and isn't + optimal for use here yet. + + + + + A major refactoring of the Kubernetes module has been + completed. Refactorings primarily focus on decoupling + components and enhancing security. Two-way TLS and RBAC has + been enabled by default for all components, which slightly + changes the way the module is configured. See: + for details. + + + + + There is now a set of confinement options + for systemd.services, which allows to + restrict services into a chroot 2 ed environment that only + contains the store paths from the runtime closure of the + service. + + + +
+
+ New Services + + The following new services were added since the last release: + + + + + ./programs/nm-applet.nix + + + + + There is a new security.googleOsLogin + module for using + OS + Login to manage SSH access to Google Compute Engine + instances, which supersedes the imperative and broken + google-accounts-daemon used in + nixos/modules/virtualisation/google-compute-config.nix. + + + + + ./services/misc/beanstalkd.nix + + + + + There is a new services.cockroachdb module + for running CockroachDB databases. NixOS now ships with + CockroachDB 2.1.x as well, available on + x86_64-linux and + aarch64-linux. + + + + + ./security/duosec.nix + + + + + The PAM module + for Duo Security has been enabled for use. One can + configure it using the security.duosec + options along with the corresponding PAM option in + security.pam.services.<name?>.duoSecurity.enable. + + + +
+
+ Backward Incompatibilities + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + The minimum version of Nix required to evaluate Nixpkgs is now + 2.0. + + + + + For users of NixOS 18.03 and 19.03, NixOS defaults to Nix + 2.0, but supports using Nix 1.11 by setting + nix.package = pkgs.nix1;. If this + option is set to a Nix 1.11 package, you will need to + either unset the option or upgrade it to Nix 2.0. + + + + + For users of NixOS 17.09, you will first need to upgrade + Nix by setting + nix.package = pkgs.nixStable2; and run + nixos-rebuild switch as the + root user. + + + + + For users of a daemon-less Nix installation on Linux or + macOS, you can upgrade Nix by running + curl -L https://nixos.org/nix/install | sh, + or prior to doing a channel update, running + nix-env -iA nix. If you have already + run a channel update and Nix is no longer able to evaluate + Nixpkgs, the error message printed should provide adequate + directions for upgrading Nix. + + + + + For users of the Nix daemon on macOS, you can upgrade Nix + by running + sudo -i sh -c 'nix-channel --update && nix-env -iA nixpkgs.nix'; sudo launchctl stop org.nixos.nix-daemon; sudo launchctl start org.nixos.nix-daemon. + + + + + + + The buildPythonPackage function now sets + strictDeps = true to help distinguish + between native and non-native dependencies in order to improve + cross-compilation compatibility. Note however that this may + break user expressions. + + + + + The buildPythonPackage function now sets + LANG = C.UTF-8 to enable Unicode support. + The glibcLocales package is no longer + needed as a build input. + + + + + The Syncthing state and configuration data has been moved from + services.syncthing.dataDir to the newly + defined services.syncthing.configDir, which + default to + /var/lib/syncthing/.config/syncthing. This + change makes possible to share synced directories using ACLs + without Syncthing resetting the permission on every start. + + + + + The ntp module now has sane default + restrictions. If you're relying on the previous defaults, + which permitted all queries and commands from all + firewall-permitted sources, you can set + services.ntp.restrictDefault and + services.ntp.restrictSource to + []. + + + + + Package rabbitmq_server is renamed to + rabbitmq-server. + + + + + The light module no longer uses setuid + binaries, but udev rules. As a consequence users of that + module have to belong to the video group in + order to use the executable (i.e. + users.users.yourusername.extraGroups = ["video"];). + + + + + Buildbot now supports Python 3 and its packages have been + moved to pythonPackages. The options + services.buildbot-master.package and + services.buildbot-worker.package can be + used to select the Python 2 or 3 version of the package. + + + + + Options + services.znc.confOptions.networks.name.userName + and + services.znc.confOptions.networks.name.modulePackages + were removed. They were never used for anything and can + therefore safely be removed. + + + + + Package wasm has been renamed + proglodyte-wasm. The package + wasm will be pointed to + ocamlPackages.wasm in 19.09, so make sure + to update your configuration if you want to keep + proglodyte-wasm + + + + + When the nixpkgs.pkgs option is set, NixOS + will no longer ignore the nixpkgs.overlays + option. The old behavior can be recovered by setting + nixpkgs.overlays = lib.mkForce [];. + + + + + OpenSMTPD has been upgraded to version 6.4.0p1. This release + makes backwards-incompatible changes to the configuration file + format. See man smtpd.conf for more + information on the new file format. + + + + + The versioned postgresql have been renamed + to use underscore number seperators. For example, + postgresql96 has been renamed to + postgresql_9_6. + + + + + Package consul-ui and passthrough + consul.ui have been removed. The package + consul now uses upstream releases that + vendor the UI into the binary. See + #48714 + for details. + + + + + Slurm introduces the new option + services.slurm.stateSaveLocation, which is + now set to /var/spool/slurm by default + (instead of /var/spool). Make sure to move + all files to the new directory or to set the option + accordingly. + + + The slurmctld now runs as user slurm + instead of root. If you want to keep + slurmctld running as root, set + services.slurm.user = root. + + + The options services.slurm.nodeName and + services.slurm.partitionName are now sets + of strings to correctly reflect that fact that each of these + options can occour more than once in the configuration. + + + + + The solr package has been upgraded from + 4.10.3 to 7.5.0 and has undergone some major changes. The + services.solr module has been updated to + reflect these changes. Please review + http://lucene.apache.org/solr/ carefully before upgrading. + + + + + Package ckb is renamed to + ckb-next, and options + hardware.ckb.* are renamed to + hardware.ckb-next.*. + + + + + The option + services.xserver.displayManager.job.logToFile + which was previously set to true when using + the display managers lightdm, + sddm or xpra has been + reset to the default value (false). + + + + + Network interface indiscriminate NixOS firewall options + (networking.firewall.allow*) are now + preserved when also setting interface specific rules such as + networking.firewall.interfaces.en0.allow*. + These rules continue to use the pseudo device + "default" + (networking.firewall.interfaces.default.*), + and assigning to this pseudo device will override the + (networking.firewall.allow*) options. + + + + + The nscd service now disables all caching + of passwd and group + databases by default. This was interferring with the correct + functioning of the libnss_systemd.so module + which is used by systemd to manage uids and + usernames in the presence of DynamicUser= + in systemd services. This was already the default behaviour in + presence of services.sssd.enable = true + because nscd caching would interfere with + sssd in unpredictable ways as well. Because + we're using nscd not for caching, but for convincing glibc to + find NSS modules in the nix store instead of an absolute path, + we have decided to disable caching globally now, as it's + usually not the behaviour the user wants and can lead to + surprising behaviour. Furthermore, negative caching of host + lookups is also disabled now by default. This should fix the + issue of dns lookups failing in the presence of an unreliable + network. + + + If the old behaviour is desired, this can be restored by + setting the services.nscd.config option + with the desired caching parameters. + + +{ + services.nscd.config = + '' + server-user nscd + threads 1 + paranoia no + debug-level 0 + + enable-cache passwd yes + positive-time-to-live passwd 600 + negative-time-to-live passwd 20 + suggested-size passwd 211 + check-files passwd yes + persistent passwd no + shared passwd yes + + enable-cache group yes + positive-time-to-live group 3600 + negative-time-to-live group 60 + suggested-size group 211 + check-files group yes + persistent group no + shared group yes + + enable-cache hosts yes + positive-time-to-live hosts 600 + negative-time-to-live hosts 5 + suggested-size hosts 211 + check-files hosts yes + persistent hosts no + shared hosts yes + ''; +} + + + See + #50316 + for details. + + + + + GitLab Shell previously used the nix store paths for the + gitlab-shell command in its + authorized_keys file, which might stop + working after garbage collection. To circumvent that, we + regenerated that file on each startup. As + gitlab-shell has now been changed to use + /var/run/current-system/sw/bin/gitlab-shell, + this is not necessary anymore, but there might be leftover + lines with a nix store path. Regenerate the + authorized_keys file via + sudo -u git -H gitlab-rake gitlab:shell:setup + in that case. + + + + + The pam_unix account module is now loaded + with its control field set to required + instead of sufficient, so that later PAM + account modules that might do more extensive checks are being + executed. Previously, the whole account module verification + was exited prematurely in case a nss module provided the + account name to pam_unix. The LDAP and SSSD + NixOS modules already add their NSS modules when enabled. In + case your setup breaks due to some later PAM account module + previosuly shadowed, or failing NSS lookups, please file a + bug. You can get back the old behaviour by manually setting + security.pam.services.<name?>.text. + + + + + The pam_unix password module is now loaded + with its control field set to sufficient + instead of required, so that password + managed only by later PAM password modules are being executed. + Previously, for example, changing an LDAP account's password + through PAM was not possible: the whole password module + verification was exited prematurely by + pam_unix, preventing + pam_ldap to manage the password as it + should. + + + + + fish has been upgraded to 3.0. It comes + with a number of improvements and backwards incompatible + changes. See the fish + release + notes for more information. + + + + + The ibus-table input method has had a change in config format, + which causes all previous settings to be lost. See + this + commit message for details. + + + + + NixOS module system type types.optionSet + and lib.mkOption argument + options are deprecated. Use + types.submodule instead. + (#54637) + + + + + matrix-synapse has been updated to version + 0.99. It will + no + longer generate a self-signed certificate on first + launch and will be + the + last version to accept self-signed certificates. As + such, it is now recommended to use a proper certificate + verified by a root CA (for example Let's Encrypt). The new + manual chapter on + Matrix contains a working example of using nginx as a + reverse proxy in front of matrix-synapse, + using Let's Encrypt certificates. + + + + + mailutils now works by default when + sendmail is not in a setuid wrapper. As a + consequence, the sendmailPath argument, + having lost its main use, has been removed. + + + + + graylog has been upgraded from version 2.* + to 3.*. Some setups making use of extraConfig (especially + those exposing Graylog via reverse proxies) need to be updated + as upstream removed/replaced some settings. See + Upgrading + Graylog for details. + + + + + The option users.ldap.bind.password was + renamed to users.ldap.bind.passwordFile, + and needs to be readable by the nslcd user. + Same applies to the new + users.ldap.daemon.rootpwmodpwFile option. + + + + + nodejs-6_x is end-of-life. + nodejs-6_x, + nodejs-slim-6_x and + nodePackages_6_x are removed. + + + +
+
+ Other Notable Changes + + + + The services.matomo module gained the + option services.matomo.package which + determines the used Matomo version. + + + The Matomo module now also comes with the systemd service + matomo-archive-processing.service and a + timer that automatically triggers archive processing every + hour. This means that you can safely + + disable browser triggers for Matomo archiving at + Administration > System > General Settings. + + + Additionally, you can enable to + + delete old visitor logs at + Administration > System > Privacy, + but make sure that you run + systemctl start matomo-archive-processing.service + at least once without errors if you have already collected + data before, so that the reports get archived before the + source data gets deleted. + + + + + composableDerivation along with supporting + library functions has been removed. + + + + + The deprecated truecrypt package has been + removed and truecrypt attribute is now an + alias for veracrypt. VeraCrypt is + backward-compatible with TrueCrypt volumes. Note that + cryptsetup also supports loading TrueCrypt + volumes. + + + + + The Kubernetes DNS addons, kube-dns, has been replaced with + CoreDNS. This change is made in accordance with Kubernetes + making CoreDNS the official default starting from + Kubernetes + v1.11. Please beware that upgrading DNS-addon on + existing clusters might induce minor downtime while the + DNS-addon terminates and re-initializes. Also note that the + DNS-service now runs with 2 pod replicas by default. The + desired number of replicas can be configured using: + services.kubernetes.addons.dns.replicas. + + + + + The quassel-webserver package and module was removed from + nixpkgs due to the lack of maintainers. + + + + + The manual gained a + new chapter on self-hosting matrix-synapse + and riot-web , the most prevalent + server and client implementations for the + Matrix federated + communication network. + + + + + The astah-community package was removed from nixpkgs due to it + being discontinued and the downloads not being available + anymore. + + + + + The httpd service now saves log files with a .log file + extension by default for easier integration with the logrotate + service. + + + + + The owncloud server packages and httpd subservice module were + removed from nixpkgs due to the lack of maintainers. + + + + + It is possible now to uze ZRAM devices as general purpose + ephemeral block devices, not only as swap. Using more than 1 + device as ZRAM swap is no longer recommended, but is still + possible by setting zramSwap.swapDevices + explicitly. + + + ZRAM algorithm can be changed now. + + + Changes to ZRAM algorithm are applied during + nixos-rebuild switch, so make sure you have + enough swap space on disk to survive ZRAM device rebuild. + Alternatively, use + nixos-rebuild boot; reboot. + + + + + Flat volumes are now disabled by default in + hardware.pulseaudio. This has been done to + prevent applications, which are unaware of this feature, + setting their volumes to 100% on startup causing harm to your + audio hardware and potentially your ears. + + + + With this change application specific volumes are relative + to the master volume which can be adjusted independently, + whereas before they were absolute; meaning that in effect, + it scaled the device-volume with the volume of the loudest + application. + + + + + + The + ndppd + module now supports + all + config options provided by the current upstream version + as service options. Additionally the ndppd + package doesn't contain the systemd unit configuration from + upstream anymore, the unit is completely configured by the + NixOS module now. + + + + + New installs of NixOS will default to the Redmine 4.x series + unless otherwise specified in + services.redmine.package while existing + installs of NixOS will default to the Redmine 3.x series. + + + + + The + Grafana + module now supports declarative + datasource + and dashboard provisioning. + + + + + The use of insecure ports on kubernetes has been deprecated. + Thus options: + services.kubernetes.apiserver.port and + services.kubernetes.controllerManager.port + has been renamed to .insecurePort, and + default of both options has changed to 0 (disabled). + + + + + Note that the default value of + services.kubernetes.apiserver.bindAddress + has changed from 127.0.0.1 to 0.0.0.0, allowing the apiserver + to be accessible from outside the master node itself. If the + apiserver insecurePort is enabled, it is strongly recommended + to only bind on the loopback interface. See: + services.kubernetes.apiserver.insecurebindAddress. + + + + + The option + services.kubernetes.apiserver.allowPrivileged + and + services.kubernetes.kubelet.allowPrivileged + now defaults to false. Disallowing privileged containers on + the cluster. + + + + + The kubernetes module does no longer add the kubernetes + package to environment.systemPackages + implicitly. + + + + + The intel driver has been removed from the + default list of + X.org + video drivers. The modesetting + driver should take over automatically, it is better maintained + upstream and has less problems with advanced X11 features. + This can lead to a change in the output names used by + xrandr. Some performance regressions on + some GPU models might happen. Some OpenCL and VA-API + applications might also break (Beignet seems to provide OpenCL + support with modesetting driver, too). + Kernel mode setting API does not support backlight control, so + xbacklight tool will not work; backlight + level can be controlled directly via /sys/ + or with brightnessctl. Users who need this + functionality more than multi-output XRandR are advised to add + `intel` to `videoDrivers` and report an issue (or provide + additional details in an existing one) + + + + + Openmpi has been updated to version 4.0.0, which removes some + deprecated MPI-1 symbols. This may break some older + applications that still rely on those symbols. An upgrade + guide can be found + here. + + + The nginx package now relies on OpenSSL 1.1 and supports TLS + 1.3 by default. You can set the protocols used by the nginx + service using + services.nginx.sslProtocols. + + + + + A new subcommand nixos-rebuild edit was + added. + + + +
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1909.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1909.section.xml new file mode 100644 index 0000000000..83cd649f4e --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-1909.section.xml @@ -0,0 +1,1197 @@ +
+ Release 19.09 (<quote>Loris</quote>, 2019/10/09) +
+ Highlights + + In addition to numerous new and upgraded packages, this release + has the following highlights: + + + + + End of support is planned for end of April 2020, handing over + to 20.03. + + + + + Nix has been updated to 2.3; see its + release + notes. + + + + + Core version changes: + + + systemd: 239 -> 243 + + + gcc: 7 -> 8 + + + glibc: 2.27 (unchanged) + + + linux: 4.19 LTS (unchanged) + + + openssl: 1.0 -> 1.1 + + + + + Desktop version changes: + + + plasma5: 5.14 -> 5.16 + + + gnome3: 3.30 -> 3.32 + + + + + PHP now defaults to PHP 7.3, updated from 7.2. + + + + + PHP 7.1 is no longer supported due to upstream not supporting + this version for the entire lifecycle of the 19.09 release. + + + + + The binfmt module is now easier to use. Additional systems can + be added through + boot.binfmt.emulatedSystems. For instance, + boot.binfmt.emulatedSystems = [ "wasm32-wasi" "x86_64-windows" "aarch64-linux" ]; + will set up binfmt interpreters for each of those listed + systems. + + + + + The installer now uses a less privileged + nixos user whereas before we logged in as + root. To gain root privileges use sudo -i + without a password. + + + + + We've updated to Xfce 4.14, which brings a new module + services.xserver.desktopManager.xfce4-14. + If you'd like to upgrade, please switch from the + services.xserver.desktopManager.xfce module + as it will be deprecated in a future release. They're + incompatibilities with the current Xfce module; it doesn't + support thunarPlugins and it isn't + recommended to use + services.xserver.desktopManager.xfce and + services.xserver.desktopManager.xfce4-14 + simultaneously or to downgrade from Xfce 4.14 after upgrading. + + + + + The GNOME 3 desktop manager module sports an interface to + enable/disable core services, applications, and optional GNOME + packages like games. + + + + + services.gnome3.core-os-services.enable + + + + + services.gnome3.core-shell.enable + + + + + services.gnome3.core-utilities.enable + + + + + services.gnome3.games.enable + + + + + With these options we hope to give users finer grained control + over their systems. Prior to this change you'd either have to + manually disable options or use + environment.gnome3.excludePackages which + only excluded the optional applications. + environment.gnome3.excludePackages is now + unguarded, it can exclude any package installed with + environment.systemPackages in the GNOME 3 + module. + + + + + Orthogonal to the previous changes to the GNOME 3 desktop + manager module, we've updated all default services and + applications to match as close as possible to a default + reference GNOME 3 experience. + + + The following changes were enacted in + services.gnome3.core-utilities.enable + + + + + accerciser + + + + + dconf-editor + + + + + evolution + + + + + gnome-documents + + + + + gnome-nettool + + + + + gnome-power-manager + + + + + gnome-todo + + + + + gnome-tweaks + + + + + gnome-usage + + + + + gucharmap + + + + + nautilus-sendto + + + + + vinagre + + + + + cheese + + + + + geary + + + + + The following changes were enacted in + services.gnome3.core-shell.enable + + + + + gnome-color-manager + + + + + orca + + + + + services.avahi.enable + + + + + +
+
+ New Services + + The following new services were added since the last release: + + + + + ./programs/dwm-status.nix + + + + + The new hardware.printers module allows to + declaratively configure CUPS printers via the + ensurePrinters and + ensureDefaultPrinter options. + ensurePrinters will never delete existing + printers, but will make sure that the given printers are + configured as declared. + + + + + There is a new + services.system-config-printer.enable + and + programs.system-config-printer.enable + module for the program of the same name. If you previously had + system-config-printer enabled through some + other means you should migrate to using one of these modules. + + + + + services.xserver.desktopManager.plasma5 + + + + + services.xserver.desktopManager.gnome3 + + + + + services.xserver.desktopManager.pantheon + + + + + services.xserver.desktopManager.mate + Note Mate uses + programs.system-config-printer as it + doesn't use it as a service, but its graphical interface + directly. + + + + + + + services.blueman.enable + has been added. If you previously had blueman installed via + environment.systemPackages please migrate + to using the NixOS module, as this would result in an + insufficiently configured blueman. + + + +
+
+ Backward Incompatibilities + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + Buildbot no longer supports Python 2, as support was dropped + upstream in version 2.0.0. Configurations may need to be + modified to make them compatible with Python 3. + + + + + PostgreSQL now uses /run/postgresql as its + socket directory instead of /tmp. So if you + run an application like eg. Nextcloud, where you need to use + the Unix socket path as the database host name, you need to + change it accordingly. + + + + + PostgreSQL 9.4 is scheduled EOL during the 19.09 life cycle + and has been removed. + + + + + The options + services.prometheus.alertmanager.user and + services.prometheus.alertmanager.group have + been removed because the alertmanager service is now using + systemd's + + DynamicUser mechanism which obviates these options. + + + + + The NetworkManager systemd unit was renamed back from + network-manager.service to NetworkManager.service for better + compatibility with other applications expecting this name. The + same applies to ModemManager where modem-manager.service is + now called ModemManager.service again. + + + + + The services.nzbget.configFile and + services.nzbget.openFirewall options were + removed as they are managed internally by the nzbget. The + services.nzbget.dataDir option hadn't + actually been used by the module for some time and so was + removed as cleanup. + + + + + The services.mysql.pidDir option was + removed, as it was only used by the wordpress apache-httpd + service to wait for mysql to have started up. This can be + accomplished by either describing a dependency on + mysql.service (preferred) or waiting for the (hardcoded) + /run/mysqld/mysql.sock file to appear. + + + + + The services.emby.enable module has been + removed, see services.jellyfin.enable + instead for a free software fork of Emby. See the Jellyfin + documentation: + + Migrating from Emby to Jellyfin + + + + + IPv6 Privacy Extensions are now enabled by default for + undeclared interfaces. The previous behaviour was quite + misleading — even though the default value for + networking.interfaces.*.preferTempAddress + was true, undeclared interfaces would not + prefer temporary addresses. Now, interfaces not mentioned in + the config will prefer temporary addresses. EUI64 addresses + can still be set as preferred by explicitly setting the option + to false for the interface in question. + + + + + Since Bittorrent Sync was superseded by Resilio Sync in 2016, + the bittorrentSync, + bittorrentSync14, and + bittorrentSync16 packages have been removed + in favor of resilio-sync. + + + The corresponding module, services.btsync + has been replaced by the services.resilio + module. + + + + + The httpd service no longer attempts to start the postgresql + service. If you have come to depend on this behaviour then you + can preserve the behavior with the following configuration: + systemd.services.httpd.after = [ "postgresql.service" ]; + + + The option services.httpd.extraSubservices + has been marked as deprecated. You may still use this feature, + but it will be removed in a future release of NixOS. You are + encouraged to convert any httpd subservices you may have + written to a full NixOS module. + + + Most of the httpd subservices packaged with NixOS have been + replaced with full NixOS modules including LimeSurvey, + WordPress, and Zabbix. These modules can be enabled using the + services.limesurvey.enable, + services.mediawiki.enable, + services.wordpress.enable, and + services.zabbixWeb.enable options. + + + + + The option + systemd.network.networks.<name>.routes.*.routeConfig.GatewayOnlink + was renamed to + systemd.network.networks.<name>.routes.*.routeConfig.GatewayOnLink + (capital L). This follows + + upstreams renaming of the setting. + + + + + As of this release the NixOps feature + autoLuks is deprecated. It no longer works + with our systemd version without manual intervention. + + + Whenever the usage of the module is detected the evaluation + will fail with a message explaining why and how to deal with + the situation. + + + A new knob named + nixops.enableDeprecatedAutoLuks has been + introduced to disable the eval failure and to acknowledge the + notice was received and read. If you plan on using the feature + please note that it might break with subsequent updates. + + + Make sure you set the _netdev option for + each of the file systems referring to block devices provided + by the autoLuks module. Not doing this might render the system + in a state where it doesn't boot anymore. + + + If you are actively using the autoLuks + module please let us know in + issue + #62211. + + + + + The setopt declarations will be evaluated at the end of + /etc/zshrc, so any code in + programs.zsh.interactiveShellInit, + programs.zsh.loginShellInit + and + programs.zsh.promptInit + may break if it relies on those options being set. + + + + + The prometheus-nginx-exporter package now + uses the offical exporter provided by NGINX Inc. Its metrics + are differently structured and are incompatible to the old + ones. For information about the metrics, have a look at the + official + repo. + + + + + The shibboleth-sp package has been updated + to version 3. It is largely backward compatible, for further + information refer to the + release + notes and + upgrade + guide. + + + Nodejs 8 is scheduled EOL under the lifetime of 19.09 and has + been dropped. + + + + + By default, prometheus exporters are now run with + DynamicUser enabled. Exporters that need a + real user, now run under a seperate user and group which + follow the pattern + <exporter-name>-exporter, instead of + the previous default nobody and + nogroup. Only some exporters are affected + by the latter, namely the exporters + dovecot, node, + postfix and varnish. + + + + + The ibus-qt package is not installed by + default anymore when + i18n.inputMethod.enabled + is set to ibus. If IBus support in Qt 4.x + applications is required, add the ibus-qt + package to your + environment.systemPackages + manually. + + + + + The CUPS Printing service now uses socket-based activation by + default, only starting when needed. The previous behavior can + be restored by setting + services.cups.startWhenNeeded to + false. + + + + + The services.systemhealth module has been + removed from nixpkgs due to lack of maintainer. + + + + + The services.mantisbt module has been + removed from nixpkgs due to lack of maintainer. + + + + + Squid 3 has been removed and the squid + derivation now refers to Squid 4. + + + + + The services.pdns-recursor.extraConfig + option has been replaced by + services.pdns-recursor.settings. The new + option allows setting extra configuration while being better + type-checked and mergeable. + + + + + No service depends on keys.target anymore + which is a systemd target that indicates if all + NixOps + keys were successfully uploaded. Instead, + <key-name>-key.service should be used + to define a dependency of a key in a service. The full issue + behind the keys.target dependency is + described at + NixOS/nixpkgs#67265. + + + The following services are affected by this: + + + + + services.dovecot2 + + + + + services.nsd + + + + + services.softether + + + + + services.strongswan + + + + + services.strongswan-swanctl + + + + + services.httpd + + + + + + + The security.acme.directory option has been + replaced by a read-only + security.acme.certs.<cert>.directory + option for each certificate you define. This will be a + subdirectory of /var/lib/acme. You can use + this read-only option to figure out where the certificates are + stored for a specific certificate. For example, the + services.nginx.virtualhosts.<name>.enableACME + option will use this directory option to find the certs for + the virtual host. + + + security.acme.preDelay and + security.acme.activationDelay options have + been removed. To execute a service before certificates are + provisioned or renewed add a + RequiredBy=acme-${cert}.service to any + service. + + + Furthermore, the acme module will not automatically add a + dependency on lighttpd.service anymore. If + you are using certficates provided by letsencrypt for + lighttpd, then you should depend on the certificate service + acme-${cert}.service> manually. + + + For nginx, the dependencies are still automatically managed + when + services.nginx.virtualhosts.<name>.enableACME + is enabled just like before. What changed is that nginx now + directly depends on the specific certificates that it needs, + instead of depending on the catch-all + acme-certificates.target. This target unit + was also removed from the codebase. This will mean nginx will + no longer depend on certificates it isn't explicitly managing + and fixes a bug with certificate renewal ordering racing with + nginx restarting which could lead to nginx getting in a broken + state as described at + NixOS/nixpkgs#60180. + + + + + The old deprecated emacs package sets have + been dropped. What used to be called + emacsPackagesNg is now simply called + emacsPackages. + + + + + services.xserver.desktopManager.xterm is + now disabled by default if stateVersion is + 19.09 or higher. Previously the xterm desktopManager was + enabled when xserver was enabled, but it isn't useful for all + people so it didn't make sense to have any desktopManager + enabled default. + + + + + The WeeChat plugin + pkgs.weechatScripts.weechat-xmpp has been + removed as it doesn't receive any updates from upstream and + depends on outdated Python2-based modules. + + + + + Old unsupported versions (logstash5, + kibana5, filebeat5, + heartbeat5, metricbeat5, + packetbeat5) of the ELK-stack and Elastic + beats have been removed. + + + + + For NixOS 19.03, both Prometheus 1 and 2 were available to + allow for a seamless transition from version 1 to 2 with + existing setups. Because Prometheus 1 is no longer developed, + it was removed. Prometheus 2 is now configured with + services.prometheus. + + + + + Citrix Receiver (citrix_receiver) has been + dropped in favor of Citrix Workspace + (citrix_workspace). + + + + + The services.gitlab module has had its + literal secret options + (services.gitlab.smtp.password, + services.gitlab.databasePassword, + services.gitlab.initialRootPassword, + services.gitlab.secrets.secret, + services.gitlab.secrets.db, + services.gitlab.secrets.otp and + services.gitlab.secrets.jws) replaced by + file-based versions + (services.gitlab.smtp.passwordFile, + services.gitlab.databasePasswordFile, + services.gitlab.initialRootPasswordFile, + services.gitlab.secrets.secretFile, + services.gitlab.secrets.dbFile, + services.gitlab.secrets.otpFile and + services.gitlab.secrets.jwsFile). This was + done so that secrets aren't stored in the world-readable nix + store, but means that for each option you'll have to create a + file with the same exact string, add "File" to the + end of the option name, and change the definition to a string + pointing to the corresponding file; e.g. + services.gitlab.databasePassword = "supersecurepassword" + becomes + services.gitlab.databasePasswordFile = "/path/to/secret_file" + where the file secret_file contains the + string supersecurepassword. + + + The state path (services.gitlab.statePath) + now has the following restriction: no parent directory can be + owned by any other user than root or the + user specified in services.gitlab.user; + i.e. if services.gitlab.statePath is set to + /var/lib/gitlab/state, + gitlab and all parent directories must be + owned by either root or the user specified + in services.gitlab.user. + + + + + The networking.useDHCP option is + unsupported in combination with + networking.useNetworkd in anticipation of + defaulting to it. It has to be set to false + and enabled per interface with + networking.interfaces.<name>.useDHCP = true; + + + + + The Twitter client corebird has been + dropped as + it + is discontinued and does not work against the new Twitter + API. Please use the fork cawbird + instead which has been adapted to the API changes and is still + maintained. + + + + + The nodejs-11_x package has been removed as + it's EOLed by upstream. + + + + + Because of the systemd upgrade, systemd-timesyncd will no + longer work if system.stateVersion is not + set correctly. When upgrading from NixOS 19.03, please make + sure that system.stateVersion is set to + "19.03", or lower if the + installation dates back to an earlier version of NixOS. + + + + + Due to the short lifetime of non-LTS kernel releases package + attributes like linux_5_1, + linux_5_2 and linux_5_3 + have been removed to discourage dependence on specific non-LTS + kernel versions in stable NixOS releases. Going forward, + versioned attributes like linux_4_9 will + exist for LTS versions only. Please use + linux_latest or + linux_testing if you depend on non-LTS + releases. Keep in mind that linux_latest + and linux_testing will change versions + under the hood during the lifetime of a stable release and + might include breaking changes. + + + + + Because of the systemd upgrade, some network interfaces might + change their name. For details see + + upstream docs or + + our ticket. + + + +
+
+ Other Notable Changes + + + + The documentation module gained an option + named documentation.nixos.includeAllModules + which makes the generated configuration.nix 5 manual page + include all options from all NixOS modules included in a given + configuration.nix configuration file. + Currently, it is set to false by default as + enabling it frequently prevents evaluation. But the plan is to + eventually have it set to true by default. + Please set it to true now in your + configuration.nix and fix all the bugs it + uncovers. + + + + + The vlc package gained support for + Chromecast streaming, enabled by default. TCP port 8010 must + be open for it to work, so something like + networking.firewall.allowedTCPPorts = [ 8010 ]; + may be required in your configuration. Also consider enabling + + Accelerated Video Playback for better transcoding + performance. + + + + + The following changes apply if the + stateVersion is changed to 19.09 or higher. + For stateVersion = "19.03" or + lower the old behavior is preserved. + + + + + solr.package defaults to + pkgs.solr_8. + + + + + + + The hunspellDicts.fr-any dictionary now + ships with fr_FR.{aff,dic} which is linked + to fr-toutesvariantes.{aff,dic}. + + + + + The mysql service now runs as + mysql user. Previously, systemd did execute + it as root, and mysql dropped privileges itself. This includes + ExecStartPre= and + ExecStartPost= phases. To accomplish that, + runtime and data directory setup was delegated to + RuntimeDirectory and tmpfiles. + + + + + With the upgrade to systemd version 242 the + systemd-timesyncd service is no longer + using DynamicUser=yes. In order for the + upgrade to work we rely on an activation script to move the + state from the old to the new directory. The older directory + (prior 19.09) was + /var/lib/private/systemd/timesync. + + + As long as the system.config.stateVersion + is below 19.09 the state folder will + migrated to its proper location + (/var/lib/systemd/timesync), if required. + + + + + The package avahi is now built to look up + service definitions from + /etc/avahi/services instead of its output + directory in the nix store. Accordingly the module + avahi now supports custom service + definitions via + services.avahi.extraServiceFiles, which are + then placed in the aforementioned directory. See + avahi.service5 for more information on custom service + definitions. + + + + + Since version 0.1.19, cargo-vendor honors + package includes that are specified in the + Cargo.toml file of Rust crates. + rustPlatform.buildRustPackage uses + cargo-vendor to collect and build dependent + crates. Since this change in cargo-vendor + changes the set of vendored files for most Rust packages, the + hash that use used to verify the dependencies, + cargoSha256, also changes. + + + The cargoSha256 hashes of all in-tree + derivations that use buildRustPackage have + been updated to reflect this change. However, third-party + derivations that use buildRustPackage may + have to be updated as well. + + + + + The consul package was upgraded past + version 1.5, so its deprecated legacy UI is + no longer available. + + + + + The default resample-method for PulseAudio has been changed + from the upstream default speex-float-1 to + speex-float-5. Be aware that low-powered + ARM-based and MIPS-based boards will struggle with this so + you'll need to set + hardware.pulseaudio.daemon.config.resample-method + back to speex-float-1. + + + + + The phabricator package and associated + httpd.extraSubservice, as well as the + phd service have been removed from nixpkgs + due to lack of maintainer. + + + + + The mercurial + httpd.extraSubservice has been removed from + nixpkgs due to lack of maintainer. + + + + + The trac + httpd.extraSubservice has been removed from + nixpkgs because it was unmaintained. + + + + + The foswiki package and associated + httpd.extraSubservice have been removed + from nixpkgs due to lack of maintainer. + + + + + The tomcat-connector + httpd.extraSubservice has been removed from + nixpkgs. + + + + + It's now possible to change configuration in + services.nextcloud + after the initial deploy since all config parameters are + persisted in an additional config file generated by the + module. Previously core configuration like database parameters + were set using their imperative installer after creating + /var/lib/nextcloud. + + + + + There exists now lib.forEach, which is like + map, but with arguments flipped. When + mapping function body spans many lines (or has nested + maps), it is often hard to follow which + list is modified. + + + Previous solution to this problem was either to use + lib.flip map idiom or extract that + anonymous mapping function to a named one. Both can still be + used but lib.forEach is preferred over + lib.flip map. + + + The /etc/sysctl.d/nixos.conf file + containing all the options set via + boot.kernel.sysctl + was moved to /etc/sysctl.d/60-nixos.conf, + as sysctl.d5 recommends prefixing all filenames in + /etc/sysctl.d with a two-digit number and a + dash to simplify the ordering of the files. + + + + + We now install the sysctl snippets shipped with systemd. + + + + + Loose reverse path filtering + + + + + Source route filtering + + + + + fq_codel as a packet scheduler (this + helps to fight bufferbloat) + + + + + This also configures the kernel to pass core dumps to + systemd-coredump, and restricts the SysRq + key combinations to the sync command only. These sysctl + snippets can be found in + /etc/sysctl.d/50-*.conf, and overridden via + boot.kernel.sysctl + (which will place the parameters in + /etc/sysctl.d/60-nixos.conf). + + + + + Core dumps are now processed by + systemd-coredump by default. + systemd-coredump behaviour can still be + modified via systemd.coredump.extraConfig. + To stick to the old behaviour (having the kernel dump to a + file called core in the working directory), + without piping it through systemd-coredump, + set systemd.coredump.enable to + false. + + + + + systemd.packages option now also supports + generators and shutdown scripts. Old + systemd.generator-packages option has been + removed. + + + + + The rmilter package was removed with + associated module and options due deprecation by upstream + developer. Use rspamd in proxy mode + instead. + + + + + systemd cgroup accounting via the + systemd.enableCgroupAccounting + option is now enabled by default. It now also enables the more + recent Block IO and IP accounting features. + + + + + We no longer enable custom font rendering settings with + fonts.fontconfig.penultimate.enable by + default. The defaults from fontconfig are sufficient. + + + + + The crashplan package and the + crashplan service have been removed from + nixpkgs due to crashplan shutting down the service, while the + crashplansb package and + crashplan-small-business service have been + removed from nixpkgs due to lack of maintainer. + + + The + redis + module was hardcoded to use the + redis user, /run/redis + as runtime directory and /var/lib/redis as + state directory. Note that the NixOS module for Redis now + disables kernel support for Transparent Huge Pages (THP), + because this features causes major performance problems for + Redis, e.g. (https://redis.io/topics/latency). + + + + + Using fonts.enableDefaultFonts adds a + default emoji font noto-fonts-emoji. + + + + + services.xserver.enable + + + + + programs.sway.enable + + + + + programs.way-cooler.enable + + + + + services.xrdp.enable + + + + + + + The altcoins categorization of packages has + been removed. You now access these packages at the top level, + ie. nix-shell -p dogecoin instead of + nix-shell -p altcoins.dogecoin, etc. + + + + + Ceph has been upgraded to v14.2.1. See the + release + notes for details. The mgr dashboard as well as osds + backed by loop-devices is no longer explicitly supported by + the package and module. Note: There's been some issues with + python-cherrypy, which is used by the dashboard and prometheus + mgr modules (and possibly others), hence + 0000-dont-check-cherrypy-version.patch. + + + + + pkgs.weechat is now compiled against + pkgs.python3. Weechat also recommends + to use + Python3 in their docs. + + + +
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2003.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2003.section.xml new file mode 100644 index 0000000000..53e6e1329a --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2003.section.xml @@ -0,0 +1,1497 @@ +
+ Release 20.03 (<quote>Markhor</quote>, 2020.04/20) +
+ Highlights + + In addition to numerous new and upgraded packages, this release + has the following highlights: + + + + + Support is planned until the end of October 2020, handing over + to 20.09. + + + + + Core version changes: + + + gcc: 8.3.0 -> 9.2.0 + + + glibc: 2.27 -> 2.30 + + + linux: 4.19 -> 5.4 + + + mesa: 19.1.5 -> 19.3.3 + + + openssl: 1.0.2u -> 1.1.1d + + + + + Desktop version changes: + + + plasma5: 5.16.5 -> 5.17.5 + + + kdeApplications: 19.08.2 -> 19.12.3 + + + gnome3: 3.32 -> 3.34 + + + pantheon: 5.0 -> 5.1.3 + + + + + Linux kernel is updated to branch 5.4 by default (from 4.19). + + + + + Grub is updated to 2.04, adding support for booting from F2FS + filesystems and Btrfs volumes using zstd compression. Note + that some users have been unable to boot after upgrading to + 2.04 - for more information, please see + this + discussion. + + + + + Postgresql for NixOS service now defaults to v11. + + + + + The graphical installer image starts the graphical session + automatically. Before you'd be greeted by a tty and asked to + enter systemctl start display-manager. It + is now possible to disable the display-manager from running by + selecting the Disable display-manager quirk + in the boot menu. + + + + + GNOME 3 has been upgraded to 3.34. Please take a look at their + Release + Notes for details. + + + + + If you enable the Pantheon Desktop Manager via + services.xserver.desktopManager.pantheon.enable, + we now default to also use + + Pantheon's newly designed greeter . Contrary to NixOS's + usual update policy, Pantheon will receive updates during the + cycle of NixOS 20.03 when backwards compatible. + + + + + By default zfs pools will now be trimmed on a weekly basis. + Trimming is only done on supported devices (i.e. NVME or SSDs) + and should improve throughput and lifetime of these devices. + It is controlled by the + services.zfs.trim.enable varname. The zfs + scrub service + (services.zfs.autoScrub.enable) and the zfs + autosnapshot service + (services.zfs.autoSnapshot.enable) are now + only enabled if zfs is set in + config.boot.initrd.supportedFilesystems or + config.boot.supportedFilesystems. These + lists will automatically contain zfs as soon as any zfs + mountpoint is configured in fileSystems. + + + + + nixos-option has been rewritten in C++, + speeding it up, improving correctness, and adding a + -r option which prints all options and + their values recursively. + + + + + services.xserver.desktopManager.default and + services.xserver.windowManager.default + options were replaced by a single + services.xserver.displayManager.defaultSession + option to improve support for upstream session files. If you + used something like: + + +{ + services.xserver.desktopManager.default = "xfce"; + services.xserver.windowManager.default = "icewm"; +} + + + you should change it to: + + +{ + services.xserver.displayManager.defaultSession = "xfce+icewm"; +} + + + + + The testing driver implementation in NixOS is now in Python + make-test-python.nix. This was done by + Jacek Galowicz + (@tfc), and + with the collaboration of Julian Stecklina + (@blitz) + and Jana Traue + (@jtraue). + All documentation has been updated to use this testing driver, + and a vast majority of the 286 tests in NixOS were ported to + python driver. In 20.09 the Perl driver implementation, + make-test.nix, is slated for removal. This + should give users of the NixOS integration framework a + transitory period to rewrite their tests to use the Python + implementation. Users of the Perl driver will see this warning + everytime they use it: + + +$ warning: Perl VM tests are deprecated and will be removed for 20.09. +Please update your tests to use the python test driver. +See https://github.com/NixOS/nixpkgs/pull/71684 for details. + + + API compatibility is planned to be kept for at least the next + release with the perl driver. + + + +
+
+ New Services + + The following new services were added since the last release: + + + + + The kubernetes kube-proxy now supports a new hostname + configuration + services.kubernetes.proxy.hostname which + has to be set if the hostname of the node should be non + default. + + + + + UPower's configuration is now managed by NixOS and can be + customized via services.upower. + + + + + To use Geary you should enable + programs.geary.enable + instead of just adding it to + environment.systemPackages. + It was created so Geary could function properly outside of + GNOME. + + + + + ./config/console.nix + + + + + ./hardware/brillo.nix + + + + + ./hardware/tuxedo-keyboard.nix + + + + + ./programs/bandwhich.nix + + + + + ./programs/bash-my-aws.nix + + + + + ./programs/liboping.nix + + + + + ./programs/traceroute.nix + + + + + ./services/backup/sanoid.nix + + + + + ./services/backup/syncoid.nix + + + + + ./services/backup/zfs-replication.nix + + + + + ./services/continuous-integration/buildkite-agents.nix + + + + + ./services/databases/victoriametrics.nix + + + + + ./services/desktops/gnome3/gnome-initial-setup.nix + + + + + ./services/desktops/neard.nix + + + + + ./services/games/openarena.nix + + + + + ./services/hardware/fancontrol.nix + + + + + ./services/mail/sympa.nix + + + + + ./services/misc/freeswitch.nix + + + + + ./services/misc/mame.nix + + + + + ./services/monitoring/do-agent.nix + + + + + ./services/monitoring/prometheus/xmpp-alerts.nix + + + + + ./services/network-filesystems/orangefs/server.nix + + + + + ./services/network-filesystems/orangefs/client.nix + + + + + ./services/networking/3proxy.nix + + + + + ./services/networking/corerad.nix + + + + + ./services/networking/go-shadowsocks2.nix + + + + + ./services/networking/ntp/openntpd.nix + + + + + ./services/networking/shorewall.nix + + + + + ./services/networking/shorewall6.nix + + + + + ./services/networking/spacecookie.nix + + + + + ./services/networking/trickster.nix + + + + + ./services/networking/v2ray.nix + + + + + ./services/networking/xandikos.nix + + + + + ./services/networking/yggdrasil.nix + + + + + ./services/web-apps/dokuwiki.nix + + + + + ./services/web-apps/gotify-server.nix + + + + + ./services/web-apps/grocy.nix + + + + + ./services/web-apps/ihatemoney + + + + + ./services/web-apps/moinmoin.nix + + + + + ./services/web-apps/trac.nix + + + + + ./services/web-apps/trilium.nix + + + + + ./services/web-apps/shiori.nix + + + + + ./services/web-servers/ttyd.nix + + + + + ./services/x11/picom.nix + + + + + ./services/x11/hardware/digimend.nix + + + + + ./services/x11/imwheel.nix + + + + + ./virtualisation/cri-o.nix + + + +
+
+ Backward Incompatibilities + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + The dhcpcd package + + does not request IPv4 addresses for tap and bridge interfaces + anymore by default. In order to still get an address on + a bridge interface, one has to disable + networking.useDHCP and explicitly enable + networking.interfaces.<name>.useDHCP + on every interface, that should get an address via DHCP. This + way, dhcpcd is configured in an explicit way about which + interface to run on. + + + + + GnuPG is now built without support for a graphical passphrase + entry by default. Please enable the + gpg-agent user service via the NixOS option + programs.gnupg.agent.enable. Note that + upstream recommends using gpg-agent and + will spawn a gpg-agent on the first + invocation of GnuPG anyway. + + + + + The dynamicHosts option has been removed + from the + NetworkManager + module. Allowing (multiple) regular users to override host + entries affecting the whole system opens up a huge attack + vector. There seem to be very rare cases where this might be + useful. Consider setting system-wide host entries using + networking.hosts, + provide them via the DNS server in your network, or use + environment.etc + to add a file into + /etc/NetworkManager/dnsmasq.d reconfiguring + hostsdir. + + + + + The 99-main.network file was removed. + Matching all network interfaces caused many breakages, see + #18962 + and + #71106. + + + We already don't support the global + networking.useDHCP, + networking.defaultGateway + and + networking.defaultGateway6 + options if + networking.useNetworkd + is enabled, but direct users to configure the per-device + networking.interfaces.<name>…. + options. + + + + + The stdenv now runs all bash with set -u, + to catch the use of undefined variables. Before, it itself + used set -u but was careful to unset it so + other packages' code ran as before. Now, all bash code is held + to the same high standard, and the rather complex stateful + manipulation of the options can be discarded. + + + + + The SLIM Display Manager has been removed, as it has been + unmaintained since 2013. Consider migrating to a different + display manager such as LightDM (current default in NixOS), + SDDM, GDM, or using the startx module which uses Xinitrc. + + + + + The Way Cooler wayland compositor has been removed, as the + project has been officially canceled. There are no more + way-cooler attribute and + programs.way-cooler options. + + + + + The BEAM package set has been deleted. You will only find + there the different interpreters. You should now use the + different build tools coming with the languages with sandbox + mode disabled. + + + + + There is now only one Xfce package-set and module. This means + that attributes xfce4-14 and + xfceUnstable all now point to the latest + Xfce 4.14 packages. And in the future NixOS releases will be + the latest released version of Xfce available at the time of + the release's development (if viable). + + + + + The + phpfpm + module now sets PrivateTmp=true in its + systemd units for better process isolation. If you rely on + /tmp being shared with other services, + explicitly override this by setting + serviceConfig.PrivateTmp to + false for each phpfpm unit. + + + + + KDE’s old multimedia framework Phonon no longer supports Qt 4. + For that reason, Plasma desktop also does not have + enableQt4Support option any more. + + + + + The BeeGFS module has been removed. + + + + + The osquery module has been removed. + + + + + Going forward, ~/bin in the users home + directory will no longer be in PATH by + default. If you depend on this you should set the option + environment.homeBinInPath to + true. The aforementioned option was added + this release. + + + + + The buildRustCrate infrastructure now + produces lib outputs in addition to the + out output. This has led to drastically + reduced closure sizes for some rust crates since development + dependencies are now in the lib output. + + + + + Pango was upgraded to 1.44, which no longer uses freetype for + font loading. This means that type1 and bitmap fonts are no + longer supported in applications relying on Pango for font + rendering (notably, GTK application). See + + upstream issue for more information. + + + + + The roundcube module has been hardened. + + + + + The password of the database is not written world readable + in the store any more. If database.host + is set to localhost, then a unix user + of the same name as the database will be created and + PostreSQL peer authentication will be used, removing the + need for a password. Otherwise, a password is still needed + and can be provided with the new option + database.passwordFile, which should be + set to the path of a file containing the password and + readable by the user nginx only. The + database.password option is insecure + and deprecated. Usage of this option will print a warning. + + + + + A random des_key is set by default in + the configuration of roundcube, instead of using the + hardcoded and insecure default. To ensure a clean + migration, all users will be logged out when you upgrade + to this release. + + + + + + + The packages openobex and + obexftp are no longer installed when + enabling Bluetooth via + hardware.bluetooth.enable. + + + + + The dump1090 derivation has been changed to + use FlightAware's dump1090 as its upstream. However, this + version does not have an internal webserver anymore. The + assets in the share/dump1090 directory of + the derivation can be used in conjunction with an external + webserver to replace this functionality. + + + + + The fourStore and fourStoreEndpoint modules have been removed. + + + + + Polkit no longer has the user of uid 0 (root) as an admin + identity. We now follow the upstream default of only having + every member of the wheel group admin privileged. Before it + was root and members of wheel. The positive outcome of this is + pkexec GUI popups or terminal prompts will no longer require + the user to choose between two essentially equivalent choices + (whether to perform the action as themselves with wheel + permissions, or as the root user). + + + + + NixOS containers no longer build NixOS manual by default. This + saves evaluation time, especially if there are many + declarative containers defined. Note that this is already done + when + <nixos/modules/profiles/minimal.nix> + module is included in container config. + + + + + The kresd services deprecates the + interfaces option in favor of the + listenPlain option which requires full + systemd.socket + compatible declaration which always include a port. + + + + + Virtual console options have been reorganized and can be found + under a single top-level attribute: + console. The full set of changes is as + follows: + + + + + i18n.consoleFont renamed to + console.font + + + + + i18n.consoleKeyMap renamed to + console.keyMap + + + + + i18n.consoleColors renamed to + console.colors + + + + + i18n.consolePackages renamed to + console.packages + + + + + i18n.consoleUseXkbConfig renamed to + console.useXkbConfig + + + + + boot.earlyVconsoleSetup renamed to + console.earlySetup + + + + + boot.extraTTYs renamed to + console.extraTTYs. + + + + + + + The + awstats + module has been rewritten to serve stats via static html + pages, updated on a timer, over + nginx, + instead of dynamic cgi pages over + apache. + + + Minor changes will be required to migrate existing + configurations. Details of the required changes can seen by + looking through the + awstats + module. + + + + + The httpd module no longer provides options to support serving + web content without defining a virtual host. As a result of + this the + services.httpd.logPerVirtualHost + option now defaults to true instead of + false. Please update your configuration to + make use of + services.httpd.virtualHosts. + + + The + services.httpd.virtualHosts.<name> + option has changed type from a list of submodules to an + attribute set of submodules, better matching + services.nginx.virtualHosts.<name>. + + + This change comes with the addition of the following options + which mimic the functionality of their + nginx counterparts: + services.httpd.virtualHosts.<name>.addSSL, + services.httpd.virtualHosts.<name>.forceSSL, + services.httpd.virtualHosts.<name>.onlySSL, + services.httpd.virtualHosts.<name>.enableACME, + services.httpd.virtualHosts.<name>.acmeRoot, + and + services.httpd.virtualHosts.<name>.useACMEHost. + + + + + For NixOS configuration options, the loaOf + type has been deprecated and will be removed in a future + release. In nixpkgs, options of this type will be changed to + attrsOf instead. If you were using one of + these in your configuration, you will see a warning suggesting + what changes will be required. + + + For example, + users.users + is a loaOf option that is commonly used as + follows: + + +{ + users.users = + [ { name = "me"; + description = "My personal user."; + isNormalUser = true; + } + ]; +} + + + This should be rewritten by removing the list and using the + value of name as the name of the attribute + set: + + +{ + users.users.me = + { description = "My personal user."; + isNormalUser = true; + }; +} + + + For more information on this change have look at these links: + issue + #1800, + PR + #63103. + + + + + For NixOS modules, the types + types.submodule and + types.submoduleWith now support paths as + allowed values, similar to how imports + supports paths. Because of this, if you have a module that + defines an option of type + either (submodule ...) path, it will break + since a path is now treated as the first type instead of the + second. To fix this, change the type to + either path (submodule ...). + + + + + The + Buildkite + Agent module and corresponding packages have been + updated to 3.x, and to support multiple instances of the agent + running at the same time. This means you will have to rename + services.buildkite-agent to + services.buildkite-agents.<name>. + Furthermore, the following options have been changed: + + + + + services.buildkite-agent.meta-data has + been renamed to + services.buildkite-agents.<name>.tags, + to match upstreams naming for 3.x. Its type has also + changed - it now accepts an attrset of strings. + + + + + Theservices.buildkite-agent.openssh.publicKeyPath + option has been removed, as it's not necessary to deploy + public keys to clone private repositories. + + + + + services.buildkite-agent.openssh.privateKeyPath + has been renamed to + buildkite-agents.<name>.privateSshKeyPath, + as the whole openssh now only contained + that single option. + + + + + services.buildkite-agents.<name>.shell + has been introduced, allowing to specify a custom shell to + be used. + + + + + + + The citrix_workspace_19_3_0 package has + been removed as it will be EOLed within the lifespan of 20.03. + For further information, please refer to the + support + and maintenance information from upstream. + + + + + The gcc5 and gfortran5 + packages have been removed. + + + + + The services.xserver.displayManager.auto + module has been removed. It was only intended for use in + internal NixOS tests, and gave the false impression of it + being a special display manager when it's actually LightDM. + Please use the + services.xserver.displayManager.lightdm.autoLogin + options instead, or any other display manager in NixOS as they + all support auto-login. If you used this module specifically + because it permitted root auto-login you can override the + lightdm-autologin pam module like: + + +{ + security.pam.services.lightdm-autologin.text = lib.mkForce '' + auth requisite pam_nologin.so + auth required pam_succeed_if.so quiet + auth required pam_permit.so + + account include lightdm + + password include lightdm + + session include lightdm + ''; +} + + + The difference is the: + + +auth required pam_succeed_if.so quiet + + + line, where default it's: + + + auth required pam_succeed_if.so uid >= 1000 quiet + + + not permitting users with uid's below 1000 (like root). All + other display managers in NixOS are configured like this. + + + + + There have been lots of improvements to the Mailman module. As + a result, + + + + + The services.mailman.hyperkittyBaseUrl + option has been renamed to + services.mailman.hyperkitty.baseUrl. + + + + + The services.mailman.hyperkittyApiKey + option has been removed. This is because having an option + for the Hyperkitty API key meant that the API key would be + stored in the world-readable Nix store, which was a + security vulnerability. A new Hyperkitty API key will be + generated the first time the new Hyperkitty service is + run, and it will then be persisted outside of the Nix + store. To continue using Hyperkitty, you must set + services.mailman.hyperkitty.enable + to true. + + + + + Additionally, some Postfix configuration must now be set + manually instead of automatically by the Mailman module: + + +{ + services.postfix.relayDomains = [ "hash:/var/lib/mailman/data/postfix_domains" ]; + services.postfix.config.transport_maps = [ "hash:/var/lib/mailman/data/postfix_lmtp" ]; + services.postfix.config.local_recipient_maps = [ "hash:/var/lib/mailman/data/postfix_lmtp" ]; +} + + + This is because some users may want to include other + values in these lists as well, and this was not possible + if they were set automatically by the Mailman module. It + would not have been possible to just concatenate values + from multiple modules each setting the values they needed, + because the order of elements in the list is significant. + + + + + + + The LLVM versions 3.5, 3.9 and 4 (including the corresponding + CLang versions) have been dropped. + + + + + The + networking.interfaces.*.preferTempAddress + option has been replaced by + networking.interfaces.*.tempAddress. The + new option allows better control of the IPv6 temporary + addresses, including completely disabling them for interfaces + where they are not needed. + + + + + Rspamd was updated to version 2.2. Read + + the upstream migration notes carefully. Please be + especially aware that some modules were removed and the + default Bayes backend is now Redis. + + + + + The *psu versions of oraclejdk8 have been + removed as they aren't provided by upstream anymore. + + + + + The services.dnscrypt-proxy module has been + removed as it used the deprecated version of dnscrypt-proxy. + We've added + services.dnscrypt-proxy2.enable + to use the supported version. This module supports + configuration via the Nix attribute set + services.dnscrypt-proxy2.settings, + or by passing a TOML configuration file via + services.dnscrypt-proxy2.configFile. + + +{ + # Example configuration: + services.dnscrypt-proxy2.enable = true; + services.dnscrypt-proxy2.settings = { + listen_addresses = [ "127.0.0.1:43" ]; + sources.public-resolvers = { + urls = [ "https://download.dnscrypt.info/resolvers-list/v2/public-resolvers.md" ]; + cache_file = "public-resolvers.md"; + minisign_key = "RWQf6LRCGA9i53mlYecO4IzT51TGPpvWucNSCh1CBM0QTaLn73Y7GFO3"; + refresh_delay = 72; + }; + }; + + services.dnsmasq.enable = true; + services.dnsmasq.servers = [ "127.0.0.1#43" ]; +} + + + + + qesteidutil has been deprecated in favor of + qdigidoc. + + + + + sqldeveloper_18 has been removed as it's not maintained + anymore, sqldeveloper has been updated to version + 19.4. Please note that this means that this + means that the oraclejdk is now required. For further + information please read the + release + notes. + + + + + Haskell env and shellFor + dev shell environments now organize dependencies the same way + as regular builds. In particular, rather than receiving all + the different lists of dependencies mashed together as one big + list, and then partitioning into Haskell and non-Hakell + dependencies, they work from the original many different + dependency parameters and don't need to algorithmically + partition anything. + + + This means that if you incorrectly categorize a dependency, + e.g. non-Haskell library dependency as a + buildDepends or run-time Haskell dependency + as a setupDepends, whereas things would + have worked before they may not work now. + + + + + The gcc-snapshot-package has been removed. It's marked as + broken for >2 years and used to point to a fairly old + snapshot from the gcc7-branch. + + + + + The nixos-build-vms8 -script now uses the python test-driver. + + + + + The riot-web package now accepts configuration overrides as an + attribute set instead of a string. A formerly used JSON + configuration can be converted to an attribute set with + builtins.fromJSON. + + + The new default configuration also disables automatic guest + account registration and analytics to improve privacy. The + previous behavior can be restored by setting + config.riot-web.conf = { disable_guests = false; piwik = true; }. + + + + + Stand-alone usage of Upower now requires + services.upower.enable instead of just + installing into + environment.systemPackages. + + + + + nextcloud has been updated to v18.0.2. This + means that users from NixOS 19.09 can't upgrade directly since + you can only move one version forward and 19.09 uses + v16.0.8. + + + To provide a safe upgrade-path and to circumvent similar + issues in the future, the following measures were taken: + + + + + The pkgs.nextcloud-attribute has been removed and replaced + with versioned attributes (currently pkgs.nextcloud17 and + pkgs.nextcloud18). With this change major-releases can be + backported without breaking stuff and to make + upgrade-paths easier. + + + + + Existing setups will be detected using + system.stateVersion: + by default, nextcloud17 will be used, but will raise a + warning which notes that after that deploy it's + recommended to update to the latest stable version + (nextcloud18) by declaring the newly introduced setting + services.nextcloud.package. + + + + + Users with an overlay (e.g. to use nextcloud at version + v18 on 19.09) will + get an evaluation error by default. This is done to ensure + that our + package-option + doesn't select an older version by accident. It's + recommended to use pkgs.nextcloud18 or to set + package + to pkgs.nextcloud explicitly. + + + + + + Please note that if you're coming from + 19.03 or older, you have to manually + upgrade to 19.09 first to upgrade your + server to Nextcloud v16. + + + + + + Hydra has gained a massive performance improvement due to + some + database schema changes by adding several IDs and + better indexing. However, it's necessary to upgrade Hydra in + multiple steps: + + + + + At first, an older version of Hydra needs to be deployed + which adds those (nullable) columns. When having set + stateVersion + to a value older than 20.03, + this package will be selected by default from the module + when upgrading. Otherwise, the package can be deployed + using the following config: + + +{ pkgs, ... }: { + services.hydra.package = pkgs.hydra-migration; +} + + + + + + + Automatically fill the newly added ID columns on the server by + running the following command: + + +$ hydra-backfill-ids + + + + Please note that this process can take a while depending on + your database-size! + + + + + + Deploy a newer version of Hydra to activate the DB + optimizations. This can be done by using hydra-unstable. This + package already includes + flake-support + and is therefore compiled against pkgs.nixFlakes. + + + + If your + stateVersion + is set to 20.03 or greater, + hydra-unstable will be used automatically! This will break + your setup if you didn't run the migration. + + + + Please note that Hydra is currently not available with + nixStable as this doesn't compile anymore. + + + + pkgs.hydra has been removed to ensure a graceful + database-migration using the dedicated package-attributes. + If you still have pkgs.hydra defined in e.g. an overlay, an + assertion error will be thrown. To circumvent this, you need + to set + services.hydra.package + to pkgs.hydra explicitly and make sure you know what you're + doing! + + + + + + The TokuDB storage engine will be disabled in mariadb 10.5. It + is recommended to switch to RocksDB. See also + TokuDB. + + + +
+
+ Other Notable Changes + + + + SD images are now compressed by default using + bzip2. + + + + + The nginx web server previously started its master process as + root privileged, then ran worker processes as a less + privileged identity user (the nginx user). + This was changed to start all of nginx as a less privileged + user (defined by services.nginx.user and + services.nginx.group). As a consequence, + all files that are needed for nginx to run (included + configuration fragments, SSL certificates and keys, etc.) must + now be readable by this less privileged user/group. + + + To continue to use the old approach, you can configure: + + +{ + services.nginx.appendConfig = let cfg = config.services.nginx; in ''user ${cfg.user} ${cfg.group};''; + systemd.services.nginx.serviceConfig.User = lib.mkForce "root"; +} + + + + + OpenSSH has been upgraded from 7.9 to 8.1, improving security + and adding features but with potential incompatibilities. + Consult the + + release announcement for more information. + + + + + PRETTY_NAME in + /etc/os-release now uses the short rather + than full version string. + + + + + The ACME module has switched from simp-le to + lego + which allows us to support DNS-01 challenges and wildcard + certificates. The following options have been added: + security.acme.acceptTerms, + security.acme.certs.<name>.dnsProvider, + security.acme.certs.<name>.credentialsFile, + security.acme.certs.<name>.dnsPropagationCheck. + As well as this, the options + security.acme.acceptTerms and either + security.acme.email or + security.acme.certs.<name>.email must + be set in order to use the ACME module. Certificates will be + regenerated on activation, no account or certificate will be + migrated from simp-le. In particular private keys will not be + preserved. However, the credentials for simp-le are preserved + and thus it is possible to roll back to previous versions + without breaking certificate generation. Note also that in + contrary to simp-le a new private key is recreated at each + renewal by default, which can have consequences if you embed + your public key in apps. + + + + + It is now possible to unlock LUKS-Encrypted file systems using + a FIDO2 token via + boot.initrd.luks.fido2Support. + + + + + Predictably named network interfaces get renamed in stage-1. + This means that it is possible to use the proper interface + name for e.g. Dropbear setups. + + + For further reference, please read + #68953 + or the corresponding + discourse + thread. + + + + + The matrix-synapse-package has been updated to + v1.11.1. + Due to + stricter + requirements for database configuration when using + postgresql, the automated database setup of the module has + been removed to avoid any further edge-cases. + + + matrix-synapse expects postgresql-databases + to have the options LC_COLLATE and + LC_CTYPE set to + 'C' + which basically instructs postgresql to + ignore any locale-based preferences. + + + Depending on your setup, you need to incorporate one of the + following changes in your setup to upgrade to 20.03: + + + + + If you use sqlite3 you don't need to do + anything. + + + + + If you use postgresql on a different + server, you don't need to change anything as well since + this module was never designed to configure remote + databases. + + + + + If you use postgresql and configured + your synapse initially on 19.09 or + older, you simply need to enable postgresql-support + explicitly: + + +{ ... }: { + services.matrix-synapse = { + enable = true; + /* and all the other config you've defined here */ + }; + services.postgresql.enable = true; +} + + + + + + + If you deploy a fresh matrix-synapse, you need to configure + the database yourself (e.g. by using the + services.postgresql.initialScript + option). An example for this can be found in the + documentation of the + Matrix module. + + + + + If you initially deployed your matrix-synapse on + nixos-unstable after + the 19.09-release, your database is + misconfigured due to a regression in NixOS. For now, + matrix-synapse will startup with a warning, but it's + recommended to reconfigure the database to set the values + LC_COLLATE and LC_CTYPE + to + 'C'. + + + + + The + systemd.network.links + option is now respected even when + systemd-networkd + is disabled. This mirrors the behaviour of systemd - It's udev + that parses .link files, not + systemd-networkd. + + + + + mongodb has been updated to version 3.4.24. + + + + Please note that mongodb has been relicensed under their own + sspl-license. + Since it's not entirely free and not OSI-approved, it's + listed as non-free. This means that Hydra doesn't provide + prebuilt mongodb-packages and needs to be built locally. + + + + +
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2009.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2009.section.xml new file mode 100644 index 0000000000..c74d850b2c --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2009.section.xml @@ -0,0 +1,2206 @@ +
+ Release 20.09 (<quote>Nightingale</quote>, 2020.10/27) + + Support is planned until the end of June 2021, handing over to + 21.05. (Plans + + have shifted by two months since release of 20.09.) + +
+ Highlights + + In addition to 7349 new, 14442 updated, and 8181 removed packages, + this release has the following highlights: + + + + + Core version changes: + + + + + gcc: 9.2.0 -> 9.3.0 + + + + + glibc: 2.30 -> 2.31 + + + + + linux: still defaults to 5.4.x, all supported kernels + available + + + + + mesa: 19.3.5 -> 20.1.7 + + + + + + + Desktop Environments: + + + + + plasma5: 5.17.5 -> 5.18.5 + + + + + kdeApplications: 19.12.3 -> 20.08.1 + + + + + gnome3: 3.34 -> 3.36, see its + release + notes + + + + + cinnamon: added at 4.6 + + + + + NixOS now distributes an official + GNOME + ISO + + + + + + + Programming Languages and Frameworks: + + + + + Agda ecosystem was heavily reworked (see more details + below) + + + + + PHP now defaults to PHP 7.4, updated from 7.3 + + + + + PHP 7.2 is no longer supported due to upstream not + supporting this version for the entire lifecycle of the + 20.09 release + + + + + Python 3 now defaults to Python 3.8 instead of 3.7 + + + + + Python 3.5 reached its upstream EOL at the end of + September 2020: it has been removed from the list of + available packages + + + + + + + Databases and Service Monitoring: + + + + + MariaDB has been updated to 10.4, MariaDB Galera to 26.4. + Please read the related upgrade instructions under + backwards + incompatibilities before upgrading. + + + + + Zabbix now defaults to 5.0, updated from 4.4. Please read + related sections under + backwards + compatibilities before upgrading. + + + + + + + Major module changes: + + + + + Quickly configure a complete, private, self-hosted video + conferencing solution with the new Jitsi Meet module. + + + + + Two new options, + authorizedKeysCommand + and + authorizedKeysCommandUser, + have been added to the openssh module. + If you have AuthorizedKeysCommand in + your + services.openssh.extraConfig + you should make use of these new options instead. + + + + + There is a new module for Podman + (virtualisation.podman), a drop-in + replacement for the Docker command line. + + + + + The new virtualisation.containers + module manages configuration shared by the CRI-O and + Podman modules. + + + + + Declarative Docker containers are renamed from + docker-containers to + virtualisation.oci-containers.containers. + This is to make it possible to use + podman instead of + docker. + + + + + The new option + documentation.man.generateCaches + has been added to automatically generate the + man-db caches, which are needed by + utilities like whatis and + apropos. The caches are generated + during the build of the NixOS configuration: since this + can be expensive when a large number of packages are + installed, the feature is disabled by default. + + + + + services.postfix.sslCACert was replaced + by + services.postfix.tlsTrustedAuthorities + which now defaults to system certificate authorities. + + + + + The various documented workarounds to use steam have been + converted to a module. + programs.steam.enable enables steam, + controller support and the workarounds. + + + + + Support for built-in LCDs in various pieces of Logitech + hardware (keyboards and USB speakers). + hardware.logitech.lcd.enable enables + support for all hardware supported by the + g15daemon + project. + + + + + The GRUB module gained support for basic password + protection, which allows to restrict non-default entries + in the boot menu to one or more users. The users and + passwords are defined via the option + boot.loader.grub.users. Note: Password + support is only available in GRUB version 2. + + + + + + + NixOS module changes: + + + + + The NixOS module system now supports freeform modules as a + mix between types.attrsOf and + types.submodule. These allow you to + explicitly declare a subset of options while still + permitting definitions without an associated option. See + for how to use + them. + + + + + Following its deprecation in 20.03, the Perl NixOS test + driver has been removed. All remaining tests have been + ported to the Python test framework. Code outside nixpkgs + using make-test.nix or + testing.nix needs to be ported to + make-test-python.nix and + testing-python.nix respectively. + + + + + Subordinate GID and UID mappings are now set up + automatically for all normal users. This will make + container tools like Podman work as non-root users out of + the box. + + + + + + + Starting with this release, the hydra-build-result + nixos-YY.MM branches no longer exist in the + deprecated + nixpkgs-channels repository. These branches are now in + the main + nixpkgs repository. + + + +
+
+ New Services + + In addition to 1119 new, 118 updated, and 476 removed options; 61 + new modules were added since the last release: + + + + + Hardware: + + + + + hardware.system76.firmware-daemon.enable + adds easy support of system76 firmware + + + + + hardware.uinput.enable + loads uinput kernel module + + + + + hardware.video.hidpi.enable + enable good defaults for HiDPI displays + + + + + hardware.wooting.enable + support for Wooting keyboards + + + + + hardware.xpadneo.enable + xpadneo driver for Xbox One wireless controllers + + + + + + + Programs: + + + + + programs.hamster.enable + enable hamster time tracking + + + + + programs.steam.enable + adds easy enablement of steam and related system + configuration + + + + + + + Security: + + + + + security.doas.enable + alternative to sudo, allows non-root users to execute + commands as root + + + + + security.tpm2.enable + add Trusted Platform Module 2 support + + + + + + + System: + + + + + boot.initrd.network.openvpn.enable + start an OpenVPN client during initrd boot + + + + + + + Virtualization: + + + + + boot.enableContainers + use nixos-containers + + + + + virtualisation.oci-containers.containers + run OCI (Docker) containers + + + + + virtualisation.podman.enable + daemonless container engine + + + + + + + Services: + + + + + services.ankisyncd.enable + Anki sync server + + + + + services.bazarr.enable + Subtitle manager for Sonarr and Radarr + + + + + services.biboumi.enable + Biboumi XMPP gateway to IRC + + + + + services.blockbook-frontend + Blockbook-frontend, a service for the Trezor wallet + + + + + services.cage.enable + Wayland cage service + + + + + services.convos.enable + IRC daemon, which can be accessed throught the browser + + + + + services.engelsystem.enable + Tool for coordinating volunteers and shifts on large + events + + + + + services.espanso.enable + text-expander written in rust + + + + + services.foldingathome.enable + Folding@home client + + + + + services.gerrit.enable + Web-based team code collaboration tool + + + + + services.go-neb.enable + Matrix bot + + + + + services.hardware.xow.enable + xow as a systemd service + + + + + services.hercules-ci-agent.enable + Hercules CI build agent + + + + + services.jicofo.enable + Jitsi Conference Focus, component of Jitsi Meet + + + + + services.jirafeau.enable + A web file repository + + + + + services.jitsi-meet.enable + Secure, simple and scalable video conferences + + + + + services.jitsi-videobridge.enable + Jitsi Videobridge, a WebRTC compatible router + + + + + services.jupyterhub.enable + Jupyterhub development server + + + + + services.k3s.enable + Lightweight Kubernetes distribution + + + + + services.magic-wormhole-mailbox-server.enable + Magic Wormhole Mailbox Server + + + + + services.malcontent.enable + Parental Control support + + + + + services.matrix-appservice-discord.enable + Matrix and Discord bridge + + + + + services.mautrix-telegram.enable + Matrix-Telegram puppeting/relaybot bridge + + + + + services.mirakurun.enable + Japanese DTV Tuner Server Service + + + + + services.molly-brown.enable + Molly-Brown Gemini server + + + + + services.mullvad-vpn.enable + Mullvad VPN daemon + + + + + services.ncdns.enable + Namecoin to DNS bridge + + + + + services.nextdns.enable + NextDNS to DoH Proxy service + + + + + services.nix-store-gcs-proxy + Google storage bucket to be used as a nix store + + + + + services.onedrive.enable + OneDrive sync service + + + + + services.pinnwand.enable + Pastebin-like service + + + + + services.pixiecore.enable + Manage network booting of machines + + + + + services.privacyidea.enable + Privacy authentication server + + + + + services.quorum.enable + Quorum blockchain daemon + + + + + services.robustirc-bridge.enable + RobustIRC bridge + + + + + services.rss-bridge.enable + Generate RSS and Atom feeds + + + + + services.rtorrent.enable + rTorrent service + + + + + services.smartdns.enable + SmartDNS DNS server + + + + + services.sogo.enable + SOGo groupware + + + + + services.teeworlds.enable + Teeworlds game server + + + + + services.torque.mom.enable + torque computing node + + + + + services.torque.server.enable + torque server + + + + + services.tuptime.enable + A total uptime service + + + + + services.urserver.enable + X11 remote server + + + + + services.wasabibackend.enable + Wasabi backend service + + + + + services.yubikey-agent.enable + Yubikey agent + + + + + services.zigbee2mqtt.enable + Zigbee to MQTT bridge + + + + + +
+
+ Backward Incompatibilities + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + MariaDB has been updated to 10.4, MariaDB Galera to 26.4. + Before you upgrade, it would be best to take a backup of your + database. For MariaDB Galera Cluster, see + Upgrading + from MariaDB 10.3 to MariaDB 10.4 with Galera Cluster + instead. Before doing the upgrade read + Incompatible + Changes Between 10.3 and 10.4. After the upgrade you + will need to run mysql_upgrade. MariaDB + 10.4 introduces a number of changes to the authentication + process, intended to make things easier and more intuitive. + See + Authentication + from MariaDB 10.4. unix_socket auth plugin does not use + a password, and uses the connecting user's UID instead. When a + new MariaDB data directory is initialized, two MariaDB users + are created and can be used with new unix_socket auth plugin, + as well as traditional mysql_native_password plugin: + root@localhost and mysql@localhost. To actually use the + traditional mysql_native_password plugin method, one must run + the following: + + +{ +services.mysql.initialScript = pkgs.writeText "mariadb-init.sql" '' + ALTER USER root@localhost IDENTIFIED VIA mysql_native_password USING PASSWORD("verysecret"); +''; +} + + + When MariaDB data directory is just upgraded (not + initialized), the users are not created or modified. + + + + + MySQL server is now started with additional systemd + sandbox/hardening options for better security. The PrivateTmp, + ProtectHome, and ProtectSystem options may be problematic when + MySQL is attempting to read from or write to your filesystem + anywhere outside of its own state directory, for example when + calling + LOAD DATA INFILE or SELECT * INTO OUTFILE. + In this scenario a variant of the following may be required: - + allow MySQL to read from /home and /tmp directories when using + LOAD DATA INFILE + + +{ + systemd.services.mysql.serviceConfig.ProtectHome = lib.mkForce "read-only"; +} + + + - allow MySQL to write to custom folder + /var/data when using + SELECT * INTO OUTFILE, assuming the mysql + user has write access to /var/data + + +{ + systemd.services.mysql.serviceConfig.ReadWritePaths = [ "/var/data" ]; +} + + + The MySQL service no longer runs its + systemd service startup script as + root anymore. A dedicated non + root super user account is required for + operation. This means users with an existing MySQL or MariaDB + database server are required to run the following SQL + statements as a super admin user before upgrading: + + +CREATE USER IF NOT EXISTS 'mysql'@'localhost' identified with unix_socket; +GRANT ALL PRIVILEGES ON *.* TO 'mysql'@'localhost' WITH GRANT OPTION; + + + If you use MySQL instead of MariaDB please replace + unix_socket with + auth_socket. If you have changed the value + of + services.mysql.user + from the default of mysql to a different + user please change 'mysql'@'localhost' to + the corresponding user instead. + + + + + Zabbix now defaults to 5.0, updated from 4.4. Please carefully + read through + the + upgrade guide and apply any changes required. Be sure + to take special note of the section on + enabling + extended range of numeric (float) values as you will + need to apply this database migration manually. + + + If you are using Zabbix Server with a MySQL or MariaDB + database you should note that using a character set of + utf8 and a collate of + utf8_bin has become mandatory with this + release. See the upstream + issue + for further discussion. Before upgrading you should check the + character set and collation used by your database and ensure + they are correct: + + +SELECT + default_character_set_name, + default_collation_name +FROM + information_schema.schemata +WHERE + schema_name = 'zabbix'; + + + If these values are not correct you should take a backup of + your database and convert the character set and collation as + required. Here is an + example + of how to do so, taken from the Zabbix forums: + + +ALTER DATABASE `zabbix` DEFAULT CHARACTER SET utf8 COLLATE utf8_bin; + +-- the following will produce a list of SQL commands you should subsequently execute +SELECT CONCAT("ALTER TABLE ", TABLE_NAME," CONVERT TO CHARACTER SET utf8 COLLATE utf8_bin;") AS ExecuteTheString +FROM information_schema.`COLUMNS` +WHERE table_schema = "zabbix" AND COLLATION_NAME = "utf8_general_ci"; + + + + + maxx package removed along with + services.xserver.desktopManager.maxx + module. Please migrate to cdesktopenv and + services.xserver.desktopManager.cde module. + + + + + The + matrix-synapse + module no longer includes optional dependencies by default, + they have to be added through the + plugins + option. + + + + + buildGoModule now internally creates a + vendor directory in the source tree for downloaded modules + instead of using go's + module + proxy protocol. This storage format is simpler and + therefore less likely to break with future versions of go. As + a result buildGoModule switched from + modSha256 to the + vendorSha256 attribute to pin fetched + version data. + + + + + Grafana is now built without support for phantomjs by default. + Phantomjs support has been + deprecated + in Grafana and the phantomjs project is + currently + unmaintained. It can still be enabled by providing + phantomJsSupport = true to the package + instantiation: + + +{ + services.grafana.package = pkgs.grafana.overrideAttrs (oldAttrs: rec { + phantomJsSupport = true; + }); +} + + + + + The + supybot + module now uses /var/lib/supybot as its + default + stateDir + path if stateVersion is 20.09 or higher. It + also enables a number of + systemd + sandboxing options which may possibly interfere with + some plugins. If this is the case you can disable the options + through attributes in + systemd.services.supybot.serviceConfig. + + + + + The security.duosec.skey option, which + stored a secret in the nix store, has been replaced by a new + security.duosec.secretKeyFile + option for better security. + + + security.duosec.ikey has been renamed to + security.duosec.integrationKey. + + + + + vmware has been removed from the + services.x11.videoDrivers defaults. For + VMWare guests set + virtualisation.vmware.guest.enable to + true which will include the appropriate + drivers. + + + + + The initrd SSH support now uses OpenSSH rather than Dropbear + to allow the use of Ed25519 keys and other OpenSSH-specific + functionality. Host keys must now be in the OpenSSH format, + and at least one pre-generated key must be specified. + + + If you used the + boot.initrd.network.ssh.host*Key options, + you'll get an error explaining how to convert your host keys + and migrate to the new + boot.initrd.network.ssh.hostKeys option. + Otherwise, if you don't have any host keys set, you'll need to + generate some; see the hostKeys option + documentation for instructions. + + + + + Since this release there's an easy way to customize your PHP + install to get a much smaller base PHP with only wanted + extensions enabled. See the following snippet installing a + smaller PHP with the extensions imagick, + opcache, pdo and + pdo_mysql loaded: + + +{ + environment.systemPackages = [ + (pkgs.php.withExtensions + ({ all, ... }: with all; [ + imagick + opcache + pdo + pdo_mysql + ]) + ) + ]; +} + + + The default php attribute hasn't lost any + extensions. The opcache extension has been + added. All upstream PHP extensions are available under + php.extensions.<name?>. + + + All PHP config flags have been removed for + the following reasons: + + + + + The updated php attribute is now easily + customizable to your liking by using + php.withExtensions or + php.buildEnv instead of writing config + files or changing configure flags. + + + + + The remaining configuration flags can now be set directly on + the php attribute. For example, instead of + + +{ + php.override { + config.php.embed = true; + config.php.apxs2 = false; + } +} + + + you should now write + + +{ + php.override { + embedSupport = true; + apxs2Support = false; + } +} + + + + + The ACME module has been overhauled for simplicity and + maintainability. Cert generation now implicitly uses the + acme user, and the + security.acme.certs._name_.user option has + been removed. Instead, certificate access from other services + is now managed through group permissions. The module no longer + runs lego twice under certain conditions, and will correctly + renew certificates if their configuration is changed. Services + which reload nginx and httpd after certificate renewal are now + properly configured too so you no longer have to do this + manually if you are using HTTPS enabled virtual hosts. A + mechanism for regenerating certs on demand has also been added + and documented. + + + + + Gollum received a major update to version 5.x and you may have + to change some links in your wiki when migrating from gollum + 4.x. More information can be found + here. + + + + + Deluge 2.x was added and is used as default for new NixOS + installations where stateVersion is >= 20.09. If you are + upgrading from a previous NixOS version, you can set + service.deluge.package = pkgs.deluge-2_x to + upgrade to Deluge 2.x and migrate the state to the new format. + Be aware that backwards state migrations are not supported by + Deluge. + + + + + Nginx web server now starting with additional + sandbox/hardening options. By default, write access to + /var/log/nginx and + /var/cache/nginx is allowed. To allow + writing to other folders, use + systemd.services.nginx.serviceConfig.ReadWritePaths + + +{ + systemd.services.nginx.serviceConfig.ReadWritePaths = [ "/var/www" ]; +} + + + Nginx is also started with the systemd option + ProtectHome = mkDefault true; which forbids + it to read anything from /home, + /root and /run/user (see + ProtectHome + docs for details). If you require serving files from + home directories, you may choose to set e.g. + + +{ + systemd.services.nginx.serviceConfig.ProtectHome = "read-only"; +} + + + + + The NixOS options nesting.clone and + nesting.children have been deleted, and + replaced with named + specialisation + configurations. + + + Replace a nesting.clone entry with: + + +{ + specialisation.example-sub-configuration = { + configuration = { + ... + }; +}; + + + Replace a nesting.children entry with: + + +{ + specialisation.example-sub-configuration = { + inheritParentConfig = false; + configuration = { + ... + }; +}; + + + To switch to a specialised configuration at runtime you need + to run: + + +$ sudo /run/current-system/specialisation/example-sub-configuration/bin/switch-to-configuration test + + + Before you would have used: + + +$ sudo /run/current-system/fine-tune/child-1/bin/switch-to-configuration test + + + + + The Nginx log directory has been moved to + /var/log/nginx, the cache directory to + /var/cache/nginx. The option + services.nginx.stateDir has been removed. + + + + + The httpd web server previously started its main process as + root privileged, then ran worker processes as a less + privileged identity user. This was changed to start all of + httpd as a less privileged user (defined by + services.httpd.user + and + services.httpd.group). + As a consequence, all files that are needed for httpd to run + (included configuration fragments, SSL certificates and keys, + etc.) must now be readable by this less privileged user/group. + + + The default value for + services.httpd.mpm + has been changed from prefork to + event. Along with this change the default + value for + services.httpd.virtualHosts.<name>.http2 + has been set to true. + + + + + The systemd-networkd option + systemd.network.networks.<name>.dhcp.CriticalConnection + has been removed following upstream systemd's deprecation of + the same. It is recommended to use + systemd.network.networks.<name>.networkConfig.KeepConfiguration + instead. See systemd.network 5 for details. + + + + + The systemd-networkd option + systemd.network.networks._name_.dhcpConfig + has been renamed to + systemd.network.networks.name.dhcpV4Config + following upstream systemd's documentation change. See + systemd.network 5 for details. + + + + + In the picom module, several options that + accepted floating point numbers encoded as strings (for + example + services.picom.activeOpacity) + have been changed to the (relatively) new native + float type. To migrate your configuration + simply remove the quotes around the numbers. + + + + + When using buildBazelPackage from Nixpkgs, + flat hash mode is now used for dependencies + instead of recursive. This is to better + allow using hashed mirrors where needed. As a result, these + hashes will have changed. + + + + + The syntax of the PostgreSQL configuration file is now checked + at build time. If your configuration includes a file + inaccessible inside the build sandbox, set + services.postgresql.checkConfig to + false. + + + + + The rkt module has been removed, it was archived by upstream. + + + + + The + Bazaar + VCS is unmaintained and, as consequence of the Python 2 EOL, + the packages bazaar and + bazaarTools were removed. Breezy, the + backward compatible fork of Bazaar (see the + announcement), + was packaged as breezy and can be used + instead. + + + Regarding Nixpkgs, fetchbzr, + nix-prefetch-bzr and Bazaar support in + Hydra will continue to work through Breezy. + + + + + In addition to the hostname, the fully qualified domain name + (FQDN), which consists of + ${networking.hostName} and + ${networking.domain} is now added to + /etc/hosts, to allow local FQDN resolution, + as used by the hostname --fqdn command and + other applications that try to determine the FQDN. These new + entries take precedence over entries from the DNS which could + cause regressions in some very specific setups. Additionally + the hostname is now resolved to 127.0.0.2 + instead of 127.0.1.1 to be consistent with + what nss-myhostname (from systemd) returns. + The old behaviour can e.g. be restored by using + networking.hosts = lib.mkForce { "127.0.1.1" = [ config.networking.hostName ]; };. + + + + + The hostname (networking.hostName) must now + be a valid DNS label (see RFC 1035, RFC 1123) and as such must + not contain the domain part. This means that the hostname must + start with a letter or digit, end with a letter or digit, and + have as interior characters only letters, digits, and hyphen. + The maximum length is 63 characters. Additionally it is + recommended to only use lower-case characters. If (e.g. for + legacy reasons) a FQDN is required as the Linux kernel network + node hostname (uname --nodename) the option + boot.kernel.sysctl."kernel.hostname" + can be used as a workaround (but be aware of the 64 character + limit). + + + + + The GRUB specific option + boot.loader.grub.extraInitrd has been + replaced with the generic option + boot.initrd.secrets. This option creates a + secondary initrd from the specified files, rather than using a + manually created initrd file. Due to an existing bug with + boot.loader.grub.extraInitrd, it is not + possible to directly boot an older generation that used that + option. It is still possible to rollback to that generation if + the required initrd file has not been deleted. + + + + + The + DNSChain + package and NixOS module have been removed from Nixpkgs as the + software is unmaintained and can't be built. For more + information see issue + #89205. + + + + + In the resilio module, + services.resilio.httpListenAddr + has been changed to listen to [::1] instead + of 0.0.0.0. + + + + + sslh has been updated to version + 1.21. The ssl probe must + be renamed to tls in + services.sslh.appendConfig. + + + + + Users of OpenAFS + 1.6 must upgrade their services to OpenAFS 1.8! In this + release, the OpenAFS package version 1.6.24 is marked broken + but can be used during transition to OpenAFS 1.8.x. Use the + options + services.openafsClient.packages.module, + services.openafsClient.packages.programs + and services.openafsServer.package to + select a different OpenAFS package. OpenAFS 1.6 will be + removed in the next release. The package + openafs and the service options will then + silently point to the OpenAFS 1.8 release. + + + See also the OpenAFS + Administrator + Guide for instructions. Beware of the following when + updating servers: + + + + + The storage format of the server key has changed and the + key must be converted before running the new release. + + + + + When updating multiple database servers, turn off the + database servers from the highest IP down to the lowest + with resting periods in between. Start up in reverse + order. Do not concurrently run database servers working + with different OpenAFS releases! + + + + + Update servers first, then clients. + + + + + + + Radicale's default package has changed from 2.x to 3.x. An + upgrade checklist can be found + here. + You can use the newer version in the NixOS service by setting + the package to + radicale3, which is done automatically if + stateVersion is 20.09 or higher. + + + + + udpt experienced a complete rewrite from + C++ to rust. The configuration format changed from ini to + toml. The new configuration documentation can be found at + the + official website and example configuration is packaged + in ${udpt}/share/udpt/udpt.toml. + + + + + We now have a unified + services.xserver.displayManager.autoLogin + option interface to be used for every display-manager in + NixOS. + + + + + The bitcoind module has changed to + multi-instance, using submodules. Therefore, it is now + mandatory to name each instance. To use this new + multi-instance config with an existing bitcoind data directory + and user, you have to adjust the original config, e.g.: + + +{ + services.bitcoind = { + enable = true; + extraConfig = "..."; + ... + }; +} + + + To something similar: + + +{ + services.bitcoind.mainnet = { + enable = true; + dataDir = "/var/lib/bitcoind"; + user = "bitcoin"; + extraConfig = "..."; + ... + }; +} + + + The key settings are: + + + + + dataDir - to continue using the same + data directory. + + + + + user - to continue using the same user + so that bitcoind maintains access to its files. + + + + + + + Graylog introduced a change in the LDAP server certificate + validation behaviour for version 3.3.3 which might break + existing setups. When updating Graylog from a version before + 3.3.3 make sure to check the Graylog + release + info for information on how to avoid the issue. + + + + + The dokuwiki module has changed to + multi-instance, using submodules. Therefore, it is now + mandatory to name each instance. Moreover, forcing SSL by + default has been dropped, so nginx.forceSSL + and nginx.enableACME are no longer set to + true. To continue using your service with + the original SSL settings, you have to adjust the original + config, e.g.: + + +{ + services.dokuwiki = { + enable = true; + ... + }; +} + + + To something similar: + + +{ + services.dokuwiki."mywiki" = { + enable = true; + nginx = { + forceSSL = true; + enableACME = true; + }; + ... + }; +} + + + The base package has also been upgraded to the 2020-07-29 + "Hogfather" release. Plugins might be incompatible + or require upgrading. + + + + + The + services.postgresql.dataDir + option is now set to + "/var/lib/postgresql/${cfg.package.psqlSchema}" + regardless of your + system.stateVersion. + Users with an existing postgresql install that have a + system.stateVersion + of 17.03 or below should double check what + the value of their + services.postgresql.dataDir + option is (/var/db/postgresql) and then + explicitly set this value to maintain compatibility: + + +{ + services.postgresql.dataDir = "/var/db/postgresql"; +} + + + The postgresql module now expects there to be a database super + user account called postgres regardless of + your + system.stateVersion. + Users with an existing postgresql install that have a + system.stateVersion + of 17.03 or below should run the following + SQL statements as a database super admin user before + upgrading: + + +CREATE ROLE postgres LOGIN SUPERUSER; + + + + + The USBGuard module now removes options and instead hardcodes + values for IPCAccessControlFiles, + ruleFiles, and + auditFilePath. Audit logs can be found in + the journal. + + + + + The NixOS module system now evaluates option definitions more + strictly, allowing it to detect a larger set of problems. As a + result, what previously evaluated may not do so anymore. See + the + PR that changed this for more info. + + + + + For NixOS configuration options, the type + loaOf, after its initial deprecation in + release 20.03, has been removed. In NixOS and Nixpkgs options + using this type have been converted to + attrsOf. For more information on this + change have look at these links: + issue + #1800, + PR + #63103. + + + + + config.systemd.services.${name}.path now + returns a list of paths instead of a colon-separated string. + + + + + Caddy module now uses Caddy v2 by default. Caddy v1 can still + be used by setting + services.caddy.package + to pkgs.caddy1. + + + New option + services.caddy.adapter + has been added. + + + + + The + jellyfin + module will use and stay on the Jellyfin version + 10.5.5 if stateVersion + is lower than 20.09. This is because + significant changes were made to the database schema, and it + is highly recommended to backup your instance before + upgrading. After making your backup, you can upgrade to the + latest version either by setting your + stateVersion to 20.09 or + higher, or set the + services.jellyfin.package to + pkgs.jellyfin. If you do not wish to + upgrade Jellyfin, but want to change your + stateVersion, you can set the value of + services.jellyfin.package to + pkgs.jellyfin_10_5. + + + + + The security.rngd service is now disabled + by default. This choice was made because there's krngd in the + linux kernel space making it (for most usecases) functionally + redundent. + + + + + The hardware.nvidia.optimus_prime.enable + service has been renamed to + hardware.nvidia.prime.sync.enable and has + many new enhancements. Related nvidia prime settings may have + also changed. + + + + + The package nextcloud17 has been removed and nextcloud18 was + marked as insecure since both of them will + + will be EOL (end of life) within the lifetime of 20.09. + + + It's necessary to upgrade to nextcloud19: + + + + + From nextcloud17, you have to upgrade to nextcloud18 first + as Nextcloud doesn't allow going multiple major revisions + forward in a single upgrade. This is possible by setting + services.nextcloud.package + to nextcloud18. + + + + + From nextcloud18, it's possible to directly upgrade to + nextcloud19 by setting + services.nextcloud.package + to nextcloud19. + + + + + + + The GNOME desktop manager no longer default installs + gnome3.epiphany. It was chosen to do this as it has a + usability breaking issue (see issue + #98819) + that makes it unsuitable to be a default app. + + + + Issue + #98819 + is now fixed and gnome3.epiphany is once again installed by + default. + + + + + + If you want to manage the configuration of wpa_supplicant + outside of NixOS you must ensure that none of + networking.wireless.networks, + networking.wireless.extraConfig + or + networking.wireless.userControlled.enable + is being used or true. Using any of those + options will cause wpa_supplicant to be started with a NixOS + generated configuration file instead of your own. + + + +
+
+ Other Notable Changes + + + + SD images are now compressed by default using + zstd. The compression for ISO images has + also been changed to zstd, but ISO images + are still not compressed by default. + + + + + services.journald.rateLimitBurst was + updated from 1000 to + 10000 to follow the new upstream systemd + default. + + + + + The notmuch package move its emacs-related binaries and emacs + lisp files to a separate output. They're not part of the + default out output anymore - if you relied + on the notmuch-emacs-mua binary or the + emacs lisp files, access them via the + notmuch.emacs output. Device tree overlay + support was improved in + #79370 + and now uses + hardware.deviceTree.kernelPackage + instead of hardware.deviceTree.base. + hardware.deviceTree.overlays + configuration was extended to support .dts + files with symbols. Device trees can now be filtered by + setting + hardware.deviceTree.filter + option. + + + + + The default output of buildGoPackage is now + $out instead of $bin. + + + + + buildGoModule doCheck + now defaults to true. + + + + + Packages built using buildRustPackage now + use release mode for the + checkPhase by default. + + + Please note that Rust packages utilizing a custom + build/install procedure (e.g. by using a + Makefile) or test suites that rely on the + structure of the target/ directory may + break due to those assumptions. For further information, + please read the Rust section in the Nixpkgs manual. + + + + + The cc- and binutils-wrapper's "infix salt" and + _BUILD_ and _TARGET_ + user infixes have been replaced with with a "suffix + salt" and suffixes and _FOR_BUILD and + _FOR_TARGET. This matches the autotools + convention for env vars which standard for these things, + making interfacing with other tools easier. + + + + + Additional Git documentation (HTML and text files) is now + available via the git-doc package. + + + + + Default algorithm for ZRAM swap was changed to + zstd. + + + + + The installer now enables sshd by default. This improves + installation on headless machines especially ARM + single-board-computer. To login through ssh, either a password + or an ssh key must be set for the root user or the nixos user. + + + + + The scripted networking system now uses + .link files in + /etc/systemd/network to configure mac + address and link MTU, instead of the sometimes buggy + network-link-* units, which have been + removed. Bringing the interface up has been moved to the + beginning of the network-addresses-* unit. + Note this doesn't require systemd-networkd + - it's udev that parses .link files. Extra + care needs to be taken in the presence of + legacy + udev rules to rename interfaces, as MAC Address and MTU + defined in these options can only match on the original link + name. In such cases, you most likely want to create a + 10-*.link file through + systemd.network.links + and set both name and MAC Address / MTU there. + + + + + Grafana received a major update to version 7.x. A plugin is + now needed for image rendering support, and plugins must now + be signed by default. More information can be found + in + the Grafana documentation. + + + + + The hardware.u2f module, which was + installing udev rules was removed, as udev gained native + support to handle FIDO security tokens. + + + + + The services.transmission module was + enhanced with the new options: + services.transmission.credentialsFile, + services.transmission.openFirewall, + and + services.transmission.performanceNetParameters. + + + transmission-daemon is now started with + additional systemd sandbox/hardening options for better + security. Please + report + any use case where this is not working well. In particular, + the RootDirectory option newly set forbids + uploading or downloading a torrent outside of the default + directory configured at + settings.download-dir. + If you really need Transmission to access other directories, + you must include those directories into the + BindPaths of the service: + + +{ + systemd.services.transmission.serviceConfig.BindPaths = [ "/path/to/alternative/download-dir" ]; +} + + + Also, connection to the RPC (Remote Procedure Call) of + transmission-daemon is now only available + on the local network interface by default. Use: + + +{ + services.transmission.settings.rpc-bind-address = "0.0.0.0"; +} + + + to get the previous behavior of listening on all network + interfaces. + + + + + With this release systemd-networkd (when + enabled through + networking.useNetworkd) + has it's netlink socket created through a + systemd.socket unit. This gives us control + over socket buffer sizes and other parameters. For larger + setups where networkd has to create a lot of (virtual) devices + the default buffer size (currently 128MB) is not enough. + + + On a machine with >100 virtual interfaces (e.g., wireguard + tunnels, VLANs, …), that all have to be brought up during + system startup, the receive buffer size will spike for a brief + period. Eventually some of the message will be dropped since + there is not enough (permitted) buffer space available. + + + By having systemd-networkd start with a + netlink socket created by systemd we can + configure the ReceiveBufferSize= parameter + in the socket options (i.e. + systemd.sockets.systemd-networkd.socketOptions.ReceiveBufferSize) + without recompiling systemd-networkd. + + + Since the actual memory requirements depend on hardware, + timing, exact configurations etc. it isn't currently possible + to infer a good default from within the NixOS module system. + Administrators are advised to monitor the logs of + systemd-networkd for + rtnl: kernel receive buffer overrun spam + and increase the memory limit as they see fit. + + + Note: Increasing the ReceiveBufferSize= + doesn't allocate any memory. It just increases the upper bound + on the kernel side. The memory allocation depends on the + amount of messages that are queued on the kernel side of the + netlink socket. + + + + + Specifying + mailboxes + in the dovecot2 module as a list is deprecated and will break + eval in 21.05. Instead, an attribute-set should be specified + where the name should be the key of the + attribute. + + + This means that a configuration like this + + +{ + services.dovecot2.mailboxes = [ + { name = "Junk"; + auto = "create"; + } + ]; +} + + + should now look like this: + + +{ + services.dovecot2.mailboxes = { + Junk.auto = "create"; + }; +} + + + + + netbeans was upgraded to 12.0 and now defaults to OpenJDK 11. + This might cause problems if your projects depend on packages + that were removed in Java 11. + + + + + nextcloud has been updated to + v19. + + + If you have an existing installation, please make sure that + you're on nextcloud18 before upgrading to nextcloud19 since + Nextcloud doesn't support upgrades across multiple major + versions. + + + + + The nixos-run-vms script now deletes the + previous run machines states on test startup. You can use the + --keep-vm-state flag to match the previous + behaviour and keep the same VM state between different test + runs. + + + + + The + nix.buildMachines + option is now type-checked. There are no functional changes, + however this may require updating some configurations to use + correct types for all attributes. + + + + + The fontconfig module stopped generating + config and cache files for fontconfig 2.10.x, the + /etc/fonts/fonts.conf now belongs to the + latest fontconfig, just like on other Linux distributions, and + we will + no + longer be versioning the config directories. + + + Fontconfig 2.10.x was removed from Nixpkgs since it hasn’t + been used in any Nixpkgs package for years now. + + + + + Nginx module + nginxModules.fastcgi-cache-purge renamed to + official name nginxModules.cache-purge. + Nginx module nginxModules.ngx_aws_auth + renamed to official name + nginxModules.aws-auth. + + + + + The option defaultPackages was added. It + installs the packages perl, rsync and strace for now. They + were added unconditionally to + systemPackages before, but are not strictly + necessary for a minimal NixOS install. You can set it to an + empty list to have a more minimal system. Be aware that some + functionality might still have an impure dependency on those + packages, so things might break. + + + + + The undervolt option no longer needs to + apply its settings every 30s. If they still become undone, + open an issue and restore the previous behaviour using + undervolt.useTimer. + + + + + Agda has been heavily reworked. + + + + + agda.mkDerivation has been heavily + changed and is now located at agdaPackages.mkDerivation. + + + + + New top-level packages agda and + agda.withPackages have been added, the + second of which sets up agda with access to chosen + libraries. + + + + + All agda libraries now live under + agdaPackages. + + + + + Many broken libraries have been removed. + + + + + See the + new + documentation for more information. + + + + + The deepin package set has been removed + from nixpkgs. It was a work in progress to package the + Deepin + Desktop Environment (DDE), including libraries, tools + and applications, and it was still missing a service to launch + the desktop environment. It has shown to no longer be a + feasible goal due to reasons discussed in + issue + #94870. The package + netease-cloud-music has also been removed, + as it depends on libraries from deepin. + + + + + The opendkim module now uses systemd + sandboxing features to limit the exposure of the system + towards the opendkim service. + + + + + Kubernetes has been upgraded to 1.19.1, which also means that + the golang version to build it has been bumped to 1.15. This + may have consequences for your existing clusters and their + certificates. Please consider + + the release notes for Kubernetes 1.19 carefully before + upgrading. + + + + + For AMD GPUs, Vulkan can now be used by adding + amdvlk to + hardware.opengl.extraPackages. + + + + + Similarly, still for AMD GPUs, the ROCm OpenCL stack can now + be used by adding rocm-opencl-icd to + hardware.opengl.extraPackages. + + + +
+
+ Contributions + + I, Jonathan Ringer, would like to thank the following individuals + for their work on nixpkgs. This release could not be done without + the hard work of the NixOS community. There were 31282 + contributions across 1313 contributors. + + + + + 2288 Mario Rodas + + + + + 1837 Frederik Rietdijk + + + + + 946 Jörg Thalheim + + + + + 925 Maximilian Bosch + + + + + 687 Jonathan Ringer + + + + + 651 Jan Tojnar + + + + + 622 Daniël de Kok + + + + + 605 WORLDofPEACE + + + + + 597 Florian Klink + + + + + 528 José Romildo Malaquias + + + + + 281 volth + + + + + 101 Robert Scott + + + + + 86 Tim Steinbach + + + + + 76 WORLDofPEACE + + + + + 49 Maximilian Bosch + + + + + 42 Thomas Tuegel + + + + + 37 Doron Behar + + + + + 36 Vladimír Čunát + + + + + 27 Jonathan Ringer + + + + + 27 Maciej Krüger + + + + + I, Jonathan Ringer, would also like to personally thank + @WORLDofPEACE for their help in mentoring me on the release + process. Special thanks also goes to Thomas Tuegel for helping + immensely with stabilizing Qt, KDE, and Plasma5; I would also like + to thank Robert Scott for his numerous fixes and pull request + reviews. + +
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2105.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2105.section.xml new file mode 100644 index 0000000000..e043bee776 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2105.section.xml @@ -0,0 +1,1565 @@ +
+ Release 21.05 (<quote>Okapi</quote>, 2021.05/31) + + Support is planned until the end of December 2021, handing over to + 21.11. + +
+ Highlights + + In addition to numerous new and upgraded packages, this release + has the following highlights: + + + + + Core version changes: + + + + + gcc: 9.3.0 -> 10.3.0 + + + + + glibc: 2.30 -> 2.32 + + + + + default linux: 5.4 -> 5.10, all supported kernels + available + + + + + mesa: 20.1.7 -> 21.0.1 + + + + + + + Desktop Environments: + + + + + GNOME: 3.36 -> 40, see its + release + notes + + + + + Plasma5: 5.18.5 -> 5.21.3 + + + + + kdeApplications: 20.08.1 -> 20.12.3 + + + + + cinnamon: 4.6 -> 4.8.1 + + + + + + + Programming Languages and Frameworks: + + + + + Python optimizations were disabled again. Builds with + optimizations enabled are not reproducible. Optimizations + can now be enabled with an option. + + + + + + + The linux_latest kernel was updated to the 5.12 series. It + currently is not officially supported for use with the zfs + filesystem. If you use zfs, you should use a different kernel + version (either the LTS kernel, or track a specific one). + + + +
+
+ New Services + + The following new services were added since the last release: + + + + + GNURadio + 3.8 was + finally + packaged, along with a rewrite to the Nix expressions, + allowing users to override the features upstream supports + selecting to compile or not to. Additionally, the attribute + gnuradio and gnuradio3_7 + now point to an externally wrapped by default derivations, + that allow you to also add `extraPythonPackages` to the Python + interpreter used by GNURadio. Missing environmental variables + needed for operational GUI were also added + (#75478). + + + + + Keycloak, + an open source identity and access management server with + support for + OpenID + Connect, OAUTH + 2.0 and + SAML + 2.0. + + + See the Keycloak + section of the NixOS manual for more information. + + + + + services.samba-wsdd.enable + Web Services Dynamic Discovery host daemon + + + + + Discourse, + a modern and open source discussion platform. + + + See the Discourse + section of the NixOS manual for more information. + + + + + services.nebula.networks + Nebula + VPN + + + +
+
+ Backward Incompatibilities + + When upgrading from a previous release, please be aware of the + following incompatible changes: + + + + + GNOME desktop environment was upgraded to 40, see the release + notes for + 40.0 + and + 3.38. + The gnome3 attribute set has been renamed + to gnome and so have been the NixOS + options. + + + + + If you are using services.udev.extraRules + to assign custom names to network interfaces, this may stop + working due to a change in the initialisation of dhcpcd and + systemd networkd. To avoid this, either move them to + services.udev.initrdRules or see the new + Assigning custom + names section of the NixOS manual for an example using + networkd links. + + + + + The security.hideProcessInformation module + has been removed. It was broken since the switch to + cgroups-v2. + + + + + The linuxPackages.ati_drivers_x11 kernel + modules have been removed. The drivers only supported kernels + prior to 4.2, and thus have become obsolete. + + + + + The systemConfig kernel parameter is no + longer added to boot loader entries. It has been unused since + September 2010, but if do have a system generation from that + era, you will now be unable to boot into them. + + + + + systemd-journal2gelf no longer parses json + and expects the receiving system to handle it. How to achieve + this with Graylog is described in this + GitHub + issue. + + + + + If the services.dbus module is enabled, + then the user D-Bus session is now always socket activated. + The associated options + services.dbus.socketActivated and + services.xserver.startDbusSession have + therefore been removed and you will receive a warning if they + are present in your configuration. This change makes the user + D-Bus session available also for non-graphical logins. + + + + + The networking.wireless.iwd module now + installs the upstream-provided 80-iwd.link file, which sets + the NamePolicy= for all wlan devices to "keep + kernel", to avoid race conditions between iwd and + networkd. If you don't want this, you can set + systemd.network.links."80-iwd" = lib.mkForce {}. + + + + + rubyMinimal was removed due to being unused + and unusable. The default ruby interpreter includes JIT + support, which makes it reference it's compiler. Since JIT + support is probably needed by some Gems, it was decided to + enable this feature with all cc references by default, and + allow to build a Ruby derivation without references to cc, by + setting jitSupport = false; in an overlay. + See + #90151 + for more info. + + + + + Setting + services.openssh.authorizedKeysFiles now + also affects which keys + security.pam.enableSSHAgentAuth will use. + WARNING: If you are using these options in combination do make + sure that any key paths you use are present in + services.openssh.authorizedKeysFiles! + + + + + The option fonts.enableFontDir has been + renamed to + fonts.fontDir.enable. + The path of font directory has also been changed to + /run/current-system/sw/share/X11/fonts, for + consistency with other X11 resources. + + + + + A number of options have been renamed in the kicad interface. + oceSupport has been renamed to + withOCE, withOCCT has + been renamed to withOCC, + ngspiceSupport has been renamed to + withNgspice, and + scriptingSupport has been renamed to + withScripting. Additionally, + kicad/base.nix no longer provides default + argument values since these are provided by + kicad/default.nix. + + + + + The socket for the pdns-recursor module was + moved from /var/lib/pdns-recursor to + /run/pdns-recursor to match upstream. + + + + + Paperwork was updated to version 2. The on-disk format + slightly changed, and it is not possible to downgrade from + Paperwork 2 back to Paperwork 1.3. Back your documents up + before upgrading. See + this + thread for more details. + + + + + PowerDNS has been updated from 4.2.x to + 4.3.x. Please be sure to review the + Upgrade + Notes provided by upstream before upgrading. Worth + specifically noting is that the service now runs entirely as a + dedicated pdns user, instead of starting as + root and dropping privileges, as well as + the default socket-dir location changing + from /var/lib/powerdns to + /run/pdns. + + + + + The mediatomb service is now using by + default the new and maintained fork gerbera + package instead of the unmaintained + mediatomb package. If you want to keep the + old behavior, you must declare it with: + + +{ + services.mediatomb.package = pkgs.mediatomb; +} + + + One new option openFirewall has been + introduced which defaults to false. If you relied on the + service declaration to add the firewall rules itself before, + you should now declare it with: + + +{ + services.mediatomb.openFirewall = true; +} + + + + + xfsprogs was update from 4.19 to 5.11. It now enables reflink + support by default on filesystem creation. Support for + reflinks was added with an experimental status to kernel 4.9 + and deemed stable in kernel 4.16. If you want to be able to + mount XFS filesystems created with this release of xfsprogs on + kernel releases older than those, you need to format them with + mkfs.xfs -m reflink=0. + + + + + The uWSGI server is now built with POSIX capabilities. As a + consequence, root is no longer required in emperor mode and + the service defaults to running as the unprivileged + uwsgi user. Any additional capability can + be added via the new option + services.uwsgi.capabilities. + The previous behaviour can be restored by setting: + + +{ + services.uwsgi.user = "root"; + services.uwsgi.group = "root"; + services.uwsgi.instance = + { + uid = "uwsgi"; + gid = "uwsgi"; + }; +} + + + Another incompatibility from the previous release is that + vassals running under a different user or group need to use + immediate-{uid,gid} instead of the usual + uid,gid options. + + + + + btc1 has been abandoned upstream, and removed. + + + + + cpp_ethereum (aleth) has been abandoned upstream, and removed. + + + + + riak-cs package removed along with + services.riak-cs module. + + + + + stanchion package removed along with + services.stanchion module. + + + + + mutt has been updated to a new major version (2.x), which + comes with some backward incompatible changes that are + described in the + release + notes for Mutt 2.0. + + + + + vim and neovim switched + to Python 3, dropping all Python 2 support. + + + + + networking.wireguard.interfaces.<name>.generatePrivateKeyFile, + which is off by default, had a chmod race + condition fixed. As an aside, the parent directory's + permissions were widened, and the key files were made + owner-writable. This only affects newly created keys. However, + if the exact permissions are important for your setup, read + #121294. + + + + + boot.zfs.forceImportAll + previously did nothing, but has been fixed. However its + default has been changed to false to + preserve the existing default behaviour. If you have this + explicitly set to true, please note that + your non-root pools will now be forcibly imported. + + + + + openafs now points to openafs_1_8, which is the new stable + release. OpenAFS 1.6 was removed. + + + + + The WireGuard module gained a new option + networking.wireguard.interfaces.<name>.peers.*.dynamicEndpointRefreshSeconds + that implements refreshing the IP of DNS-based endpoints + periodically (which WireGuard itself + cannot + do). + + + + + MariaDB has been updated to 10.5. Before you upgrade, it would + be best to take a backup of your database and read + + Incompatible Changes Between 10.4 and 10.5. After the + upgrade you will need to run mysql_upgrade. + + + + + The TokuDB storage engine dropped in mariadb 10.5 and removed + in mariadb 10.6. It is recommended to switch to RocksDB. See + also + TokuDB + and + MDEV-19780: + Remove the TokuDB storage engine. + + + + + The openldap module now has support for + OLC-style configuration, users of the + configDir option may wish to migrate. If + you continue to use configDir, ensure that + olcPidFile is set to + /run/slapd/slapd.pid. + + + As a result, extraConfig and + extraDatabaseConfig are removed. To help + with migration, you can convert your + slapd.conf file to OLC configuration with + the following script (find the location of this configuration + file by running systemctl status openldap, + it is the -f option. + + +$ TMPDIR=$(mktemp -d) +$ slaptest -f /path/to/slapd.conf -F $TMPDIR +$ slapcat -F $TMPDIR -n0 -H 'ldap:///???(!(objectClass=olcSchemaConfig))' + + + This will dump your current configuration in LDIF format, + which should be straightforward to convert into Nix settings. + This does not show your schema configuration, as this is + unnecessarily verbose for users of the default schemas and + slaptest is buggy with schemas directly in + the config file. + + + + + Amazon EC2 and OpenStack Compute (nova) images now re-fetch + instance meta data and user data from the instance metadata + service (IMDS) on each boot. For example: stopping an EC2 + instance, changing its user data, and restarting the instance + will now cause it to fetch and apply the new user data. + + + + Specifically, /etc/ec2-metadata is + re-populated on each boot. Some NixOS scripts that read from + this directory are guarded to only run if the files they + want to manipulate do not already exist, and so will not + re-apply their changes if the IMDS response changes. + Examples: root's SSH key is only added if + /root/.ssh/authorized_keys does not + exist, and SSH host keys are only set from user data if they + do not exist in /etc/ssh. + + + + + + The rspamd services is now sandboxed. It is + run as a dynamic user instead of root, so secrets and other + files may have to be moved or their permissions may have to be + fixed. The sockets are now located in + /run/rspamd instead of + /run. + + + + + Enabling the Tor client no longer silently also enables and + configures Privoxy, and the + services.tor.client.privoxy.enable option + has been removed. To enable Privoxy, and to configure it to + use Tor's faster port, use the following configuration: + + +{ + opt-services.privoxy.enable = true; + opt-services.privoxy.enableTor = true; +} + + + + + The services.tor module has a new + exhaustively typed + services.tor.settings + option following RFC 0042; backward compatibility with old + options has been preserved when aliasing was possible. The + corresponding systemd service has been hardened, but there is + a chance that the service still requires more permissions, so + please report any related trouble on the bugtracker. Onion + services v3 are now supported in + services.tor.relay.onionServices. + A new + services.tor.openFirewall + option as been introduced for allowing connections on all the + TCP ports configured. + + + + + The options + services.slurm.dbdserver.storagePass and + services.slurm.dbdserver.configFile have + been removed. Use + services.slurm.dbdserver.storagePassFile + instead to provide the database password. Extra config options + can be given via the option + services.slurm.dbdserver.extraConfig. The + actual configuration file is created on the fly on startup of + the service. This avoids that the password gets exposed in the + nix store. + + + + + The wafHook hook does not wrap Python + anymore. Packages depending on wafHook need + to include any Python into their + nativeBuildInputs. + + + + + Starting with version 1.7.0, the project formerly named + CodiMD is now named + HedgeDoc. New installations will no longer + use the old name for users, state directories and such, this + needs to be considered when moving state to a more recent + NixOS installation. Based on + system.stateVersion, + existing installations will continue to work. + + + + + The fish-foreign-env package has been replaced with + fishPlugins.foreign-env, in which the fish functions have been + relocated to the vendor_functions.d + directory to be loaded automatically. + + + + + The prometheus json exporter is now managed by the prometheus + community. Together with additional features some backwards + incompatibilities were introduced. Most importantly the + exporter no longer accepts a fixed command-line parameter to + specify the URL of the endpoint serving JSON. It now expects + this URL to be passed as an URL parameter, when scraping the + exporter's /probe endpoint. In the + prometheus scrape configuration the scrape target might look + like this: + + +http://some.json-exporter.host:7979/probe?target=https://example.com/some/json/endpoint + + + Existing configuration for the exporter needs to be updated, + but can partially be re-used. Documentation is available in + the upstream repository and a small example for NixOS is + available in the corresponding NixOS test. + + + These changes also affect + services.prometheus.exporters.rspamd.enable, + which is just a preconfigured instance of the json exporter. + + + For more information, take a look at the + + official documentation of the json_exporter. + + + + + Androidenv was updated, removing the + includeDocs and + lldbVersions arguments. Docs only covered a + single version of the Android SDK, LLDB is now bundled with + the NDK, and both are no longer available to download from the + Android package repositories. Additionally, since the package + lists have been updated, some older versions of Android + packages may not be bundled. If you depend on older versions + of Android packages, we recommend overriding the repo. + + + Android packages are now loaded from a repo.json file created + by parsing Android repo XML files. The arguments + repoJson and repoXmls + have been added to allow overriding the built-in androidenv + repo.json with your own. Additionally, license files are now + written to allow compatibility with Gradle-based tools, and + the extraLicenses argument has been added + to accept more SDK licenses if your project requires it. See + the androidenv documentation for more details. + + + + + The attribute mpi is now consistently used + to provide a default, system-wide MPI implementation. The + default implementation is openmpi, which has been used before + by all derivations affects by this change. Note that all + packages that have used mpi ? null in the + input for optional MPI builds, have been changed to the + boolean input paramater useMpi to enable + building with MPI. Building all packages with + mpich instead of the default + openmpi can now be achived like this: + + +self: super: +{ + mpi = super.mpich; +} + + + + + The Searx module has been updated with the ability to + configure the service declaratively and uWSGI integration. The + option services.searx.configFile has been + renamed to + services.searx.settingsFile + for consistency with the new + services.searx.settings. + In addition, the searx uid and gid + reservations have been removed since they were not necessary: + the service is now running with a dynamically allocated uid. + + + + + The libinput module has been updated with the ability to + configure mouse and touchpad settings separately. The options + in services.xserver.libinput have been + renamed to + services.xserver.libinput.touchpad, while + there is a new + services.xserver.libinput.mouse for mouse + related configuration. + + + Since touchpad options no longer apply to all devices, you may + want to replicate your touchpad configuration in mouse + section. + + + + + ALSA OSS emulation + (sound.enableOSSEmulation) is now disabled + by default. + + + + + Thinkfan as been updated to 1.2.x, which + comes with a new YAML based configuration format. For this + reason, several NixOS options of the thinkfan module have been + changed to non-backward compatible types. In addition, a new + services.thinkfan.settings + option has been added. + + + Please read the + + thinkfan documentation before updating. + + + + + Adobe Flash Player support has been dropped from the tree. In + particular, the following packages no longer support it: + + + + + chromium + + + + + firefox + + + + + qt48 + + + + + qt5.qtwebkit + + + + + Additionally, packages flashplayer and hal-flash were removed + along with the services.flashpolicyd + module. + + + + + The security.rngd module has been removed. + It was disabled by default in 20.09 as it was functionally + redundant with krngd in the linux kernel. It is not necessary + for any device that the kernel recognises as an hardware RNG, + as it will automatically run the krngd task to periodically + collect random data from the device and mix it into the + kernel's RNG. + + + The default SMTP port for GitLab has been changed to + 25 from its previous default of + 465. If you depended on this default, you + should now set the + services.gitlab.smtp.port + option. + + + + + The default version of ImageMagick has been updated from 6 to + 7. You can use imagemagick6, imagemagick6_light, and + imagemagick6Big if you need the older version. + + + + + services.xserver.videoDrivers + no longer uses the deprecated cirrus and + vesa device dependent X drivers by default. + It also enables both amdgpu and + nouveau drivers by default now. + + + + + The kindlegen package is gone, because it + is no longer supported or hosted by Amazon. Sadly, its + replacement, Kindle Previewer, has no Linux support. However, + there are other ways to generate MOBI files. See + the + discussion for more info. + + + + + The apacheKafka packages are now built with version-matched + JREs. Versions 2.6 and above, the ones that recommend it, use + jdk11, while versions below remain on jdk8. The NixOS service + has been adjusted to start the service using the same version + as the package, adjustable with the new + services.apache-kafka.jre + option. Furthermore, the default list of + services.apache-kafka.jvmOptions + have been removed. You should set your own according to the + upstream + documentation for your Kafka version. + + + + + The kodi package has been modified to allow concise addon + management. Consider the following configuration from previous + releases of NixOS to install kodi, including the + kodiPackages.inputstream-adaptive and kodiPackages.vfs-sftp + addons: + + +{ + environment.systemPackages = [ + pkgs.kodi + ]; + + nixpkgs.config.kodi = { + enableInputStreamAdaptive = true; + enableVFSSFTP = true; + }; +} + + + All Kodi config flags have been removed, + and as a result the above configuration should now be written + as: + + +{ + environment.systemPackages = [ + (pkgs.kodi.withPackages (p: with p; [ + inputstream-adaptive + vfs-sftp + ])) + ]; +} + + + + + environment.defaultPackages now includes + the nano package. If pkgs.nano is not added to the list, make + sure another editor is installed and the + EDITOR environment variable is set to it. + Environment variables can be set using + environment.variables. + + + + + services.minio.dataDir changed type to a + list of paths, required for specifiyng multiple data + directories for using with erasure coding. Currently, the + service doesn't enforce nor checks the correct number of paths + to correspond to minio requirements. + + + + + All CUDA toolkit versions prior to CUDA 10 have been removed. + + + + + The kbdKeymaps package was removed since dvp and neo are now + included in kbd. If you want to use the Programmer Dvorak + Keyboard Layout, you have to use + dvorak-programmer in + console.keyMap now instead of + dvp. In + services.xserver.xkbVariant it's still + dvp. + + + + + The babeld service is now being run as an unprivileged user. + To achieve that the module configures + skip-kernel-setup true and takes care of + setting forwarding and rp_filter sysctls by itself as well as + for each interface in + services.babeld.interfaces. + + + + + The services.zigbee2mqtt.config option has + been renamed to + services.zigbee2mqtt.settings and now + follows + RFC + 0042. + + + + + The yadm dotfile manager has been updated from 2.x to 3.x, which + has new (XDG) default locations for some data/state files. Most + yadm commands will fail and print a legacy path warning (which + describes how to upgrade/migrate your repository). If you have + scripts, daemons, scheduled jobs, shell profiles, etc. that invoke + yadm, expect them to fail or misbehave until you perform this + migration and prepare accordingly. + + + + + Instead of determining + services.radicale.package automatically + based on system.stateVersion, the latest + version is always used because old versions are not officially + supported. + + + Furthermore, Radicale's systemd unit was hardened which might + break some deployments. In particular, a non-default + filesystem_folder has to be added to + systemd.services.radicale.serviceConfig.ReadWritePaths + if the deprecated services.radicale.config + is used. + + + + + In the security.acme module, use of + --reuse-key parameter for Lego has been + removed. It was introduced for HKPK, but this security feature + is now deprecated. It is a better security practice to rotate + key pairs instead of always keeping the same. If you need to + keep this parameter, you can add it back using + extraLegoRenewFlags as an option for the + appropriate certificate. + + + +
+
+ Other Notable Changes + + + + stdenv.lib has been deprecated and will + break eval in 21.11. Please use pkgs.lib + instead. See + #108938 + for details. + + + + + GNURadio + has a pkgs attribute set, and there's a + gnuradio.callPackage function that extends + pkgs with a + mkDerivation, and a + mkDerivationWith, like Qt5. Now all + gnuradio.pkgs are defined with + gnuradio.callPackage and some packages that + depend on gnuradio are defined with this as well. + + + + + Privoxy has + been updated to version 3.0.32 (See + announcement). + Compared to the previous release, Privoxy has gained support + for HTTPS inspection (still experimental), Brotli + decompression, several new filters and lots of bug fixes, + including security ones. In addition, the package is now built + with compression and external filters support, which were + previously disabled. + + + Regarding the NixOS module, new options for HTTPS inspection + have been added and + services.privoxy.extraConfig has been + replaced by the new + services.privoxy.settings + (See + RFC + 0042 for the motivation). + + + + + Kodi has been + updated to version 19.1 "Matrix". See the + announcement + for further details. + + + + + The services.packagekit.backend option has + been removed as it only supported a single setting which would + always be the default. Instead new + RFC + 0042 compliant + services.packagekit.settings + and + services.packagekit.vendorSettings + options have been introduced. + + + + + Nginx has been + updated to stable version 1.20.0. Now nginx uses the zlib-ng + library by default. + + + + + KDE Gear (formerly KDE Applications) is upgraded to 21.04, see + its + release + notes for details. + + + The kdeApplications package set is now + kdeGear, in keeping with the new name. The + old name remains for compatibility, but it is deprecated. + + + + + Libreswan has + been updated to version 4.4. The package now includes example + configurations and manual pages by default. The NixOS module + has been changed to use the upstream systemd units and write + the configuration in the /etc/ipsec.d/ + directory. In addition, two new options have been added to + specify connection policies + (services.libreswan.policies) + and disable send/receive redirects + (services.libreswan.disableRedirects). + + + + + The Mailman NixOS module (services.mailman) + has a new option + services.mailman.enablePostfix, + defaulting to true, that controls integration with Postfix. + + + If this option is disabled, default MTA config becomes not set + and you should set the options in + services.mailman.settings.mta according to + the desired configuration as described in + Mailman + documentation. + + + + + The default-version of nextcloud is + nextcloud21. Please note that it's not + possible to upgrade nextcloud across + multiple major versions! This means that it's e.g. not + possible to upgrade from nextcloud18 to nextcloud20 in a + single deploy and most 20.09 users will + have to upgrade to nextcloud20 first. + + + The package can be manually upgraded by setting + services.nextcloud.package + to nextcloud21. + + + + + The setting + services.redis.bind + defaults to 127.0.0.1 now, making Redis + listen on the loopback interface only, and not all public + network interfaces. + + + + + NixOS now emits a deprecation warning if systemd's + StartLimitInterval setting is used in a + serviceConfig section instead of in a + unitConfig; that setting is deprecated and + now undocumented for the service section by systemd upstream, + but still effective and somewhat buggy there, which can be + confusing. See + #45785 + for details. + + + All services should use + systemd.services.name.startLimitIntervalSec + or StartLimitIntervalSec in + systemd.services.name.unitConfig + instead. + + + + + The mediatomb service declares new options. + It also adapts existing options so the configuration + generation is now lazy. The existing option + customCfg (defaults to false), when + enabled, stops the service configuration generation + completely. It then expects the users to provide their own + correct configuration at the right location (whereas the + configuration was generated and not used at all before). The + new option transcodingOption (defaults to + no) allows a generated configuration. It makes the mediatomb + service pulls the necessary runtime dependencies in the nix + store (whereas it was generated with hardcoded values before). + The new option mediaDirectories allows the + users to declare autoscan media directories from their nixos + configuration: + + +{ + services.mediatomb.mediaDirectories = [ + { path = "/var/lib/mediatomb/pictures"; recursive = false; hidden-files = false; } + { path = "/var/lib/mediatomb/audio"; recursive = true; hidden-files = false; } + ]; +} + + + + + The Unbound DNS resolver service + (services.unbound) has been refactored to + allow reloading, control sockets and to fix startup ordering + issues. + + + It is now possible to enable a local UNIX control socket for + unbound by setting the + services.unbound.localControlSocketPath + option. + + + Previously we just applied a very minimal set of restrictions + and trusted unbound to properly drop root privs and + capabilities. + + + As of this we are (for the most part) just using the upstream + example unit file for unbound. The main difference is that we + start unbound as unbound user with the + required capabilities instead of letting unbound do the chroot + & uid/gid changes. + + + The upstream unit configuration this is based on is a lot + stricter with all kinds of permissions then our previous + variant. It also came with the default of having the + Type set to notify, + therefore we are now also using the + unbound-with-systemd package here. Unbound + will start up, read the configuration files and start + listening on the configured ports before systemd will declare + the unit active (running). This will likely + help with startup order and the occasional race condition + during system activation where the DNS service is started but + not yet ready to answer queries. Services depending on + nss-lookup.target or + unbound.service are now be able to use + unbound when those targets have been reached. + + + Additionally to the much stricter runtime environment the + /dev/urandom mount lines we previously had + in the code (that randomly failed during the stop-phase) have + been removed as systemd will take care of those for us. + + + The preStart script is now only required if + we enabled the trust anchor updates (which are still enabled + by default). + + + Another benefit of the refactoring is that we can now issue + reloads via either pkill -HUP unbound and + systemctl reload unbound to reload the + running configuration without taking the daemon offline. A + prerequisite of this was that unbound configuration is + available on a well known path on the file system. We are + using the path /etc/unbound/unbound.conf as + that is the default in the CLI tooling which in turn enables + us to use unbound-control without passing a + custom configuration location. + + + The module has also been reworked to be + RFC + 0042 compliant. As such, + sevices.unbound.extraConfig has been + removed and replaced by + services.unbound.settings. + services.unbound.interfaces has been + renamed to + services.unbound.settings.server.interface. + + + services.unbound.forwardAddresses and + services.unbound.allowedAccess have also + been changed to use the new settings interface. You can follow + the instructions when executing + nixos-rebuild to upgrade your configuration + to use the new interface. + + + + + The services.dnscrypt-proxy2 module now + takes the upstream's example configuration and updates it with + the user's settings. An option has been added to restore the + old behaviour if you prefer to declare the configuration from + scratch. + + + + + NixOS now defaults to the unified cgroup hierarchy + (cgroupsv2). See the + Fedora + Article for 31 for details on why this is desirable, + and how it impacts containers. + + + If you want to run containers with a runtime that does not yet + support cgroupsv2, you can switch back to the old behaviour by + setting + systemd.enableUnifiedCgroupHierarchy + = false; and rebooting. + + + + + PulseAudio was upgraded to 14.0, with changes to the handling + of default sinks. See its + release + notes. + + + + + GNOME users may wish to delete their + ~/.config/pulse due to the changes to + stream routing logic. See + PulseAudio + bug 832 for more information. + + + + + The zookeeper package does not provide + zooInspector.sh anymore, as that + "contrib" has been dropped from upstream releases. + + + + + In the ACME module, the data used to build the hash for the + account directory has changed to accomodate new features to + reduce account rate limit issues. This will trigger new + account creation on the first rebuild following this update. + No issues are expected to arise from this, thanks to the new + account creation handling. + + + + + users.users.name.createHome + now always ensures home directory permissions to be + 0700. Permissions had previously been + ignored for already existing home directories, possibly + leaving them readable by others. The option's description was + incorrect regarding ownership management and has been + simplified greatly. + + + + + When defining a new user, one of + users.users.name.isNormalUser + and + users.users.name.isSystemUser + is now required. This is to prevent accidentally giving a UID + above 1000 to system users, which could have unexpected + consequences, like running user activation scripts for system + users. Note that users defined with an explicit UID below 500 + are exempted from this check, as + users.users.name.isSystemUser + has no effect for those. + + + + + The security.apparmor module, for the + AppArmor + Mandatory Access Control system, has been substantialy + improved along with related tools, so that module maintainers + can now more easily write AppArmor profiles for NixOS. The + most notable change on the user-side is the new option + security.apparmor.policies, + replacing the previous profiles option to + provide a way to disable a profile and to select whether to + confine in enforce mode (default) or in complain mode (see + journalctl -b --grep apparmor). + Security-minded users may also want to enable + security.apparmor.killUnconfinedConfinables, + at the cost of having some of their processes killed when + updating to a NixOS version introducing new AppArmor profiles. + + + + + The GNOME desktop manager once again installs gnome.epiphany + by default. + + + + + NixOS now generates empty /etc/netgroup. + /etc/netgroup defines network-wide groups + and may affect to setups using NIS. + + + + + Platforms, like stdenv.hostPlatform, no + longer have a platform attribute. It has + been (mostly) flattened away: + + + + + platform.gcc is now + gcc + + + + + platform.kernel* is now + linux-kernel.* + + + + + Additionally, platform.kernelArch moved to + the top level as linuxArch to match the + other *Arch variables. + + + The platform grouping of these things never + meant anything, and was just a historial/implementation + artifact that was overdue removal. + + + + + services.restic now uses a dedicated cache + directory for every backup defined in + services.restic.backups. The old global + cache directory, /root/.cache/restic, is + now unused and can be removed to free up disk space. + + + + + isync: The isync + compatibility wrapper was removed and the Master/Slave + terminology has been deprecated and should be replaced with + Far/Near in the configuration file. + + + + + The nix-gc service now accepts randomizedDelaySec (default: 0) + and persistent (default: true) parameters. By default nix-gc + will now run immediately if it would have been triggered at + least once during the time when the timer was inactive. + + + + + The rustPlatform.buildRustPackage function + is split into several hooks: cargoSetupHook to set up + vendoring for Cargo-based projects, cargoBuildHook to build a + project using Cargo, cargoInstallHook to install a project + using Cargo, and cargoCheckHook to run tests in Cargo-based + projects. With this change, mixed-language projects can use + the relevant hooks within builders other than + buildRustPackage. However, these changes + also required several API changes to + buildRustPackage itself: + + + + + The target argument was removed. + Instead, buildRustPackage will always + use the same target as the C/C++ compiler that is used. + + + + + The cargoParallelTestThreads argument + was removed. Parallel tests are now disabled through + dontUseCargoParallelTests. + + + + + + + The rustPlatform.maturinBuildHook hook was + added. This hook can be used with + buildPythonPackage to build Python packages + that are written in Rust and use Maturin as their build tool. + + + + + Kubernetes has + deprecated + docker as container runtime. As a consequence, the + Kubernetes module now has support for configuration of custom + remote container runtimes and enables containerd by default. + Note that containerd is more strict regarding container image + OCI-compliance. As an example, images with CMD or ENTRYPOINT + defined as strings (not lists) will fail on containerd, while + working fine on docker. Please test your setup and container + images with containerd prior to upgrading. + + + + + The GitLab module now has support for automatic backups. A + schedule can be set with the + services.gitlab.backup.startAt + option. + + + + + Prior to this release, systemd would also read system units + from an undocumented + /etc/systemd-mutable/system path. This path + has been dropped from the defaults. That path (or others) can + be re-enabled by adding it to the + boot.extraSystemdUnitPaths + list. + + + + + PostgreSQL 9.5 is scheduled EOL during the 21.05 life cycle + and has been removed. + + + + + Xfce4 relies + on GIO/GVfs for userspace virtual filesystem access in + applications like + thunar + and + gigolo. + For that to work, the gvfs nixos service is enabled by + default, and it can be configured with the specific package + that provides GVfs. Until now Xfce4 was setting it to use a + lighter version of GVfs (without support for samba). To avoid + conflicts with other desktop environments this setting has + been dropped. Users that still want it should add the + following to their system configuration: + + +{ + services.gvfs.package = pkgs.gvfs.override { samba = null; }; +} + + + + + The newly enabled systemd-pstore.service + now automatically evacuates crashdumps and panic logs from the + persistent storage to + /var/lib/systemd/pstore. This prevents + NVRAM from filling up, which ensures the latest diagnostic + data is always stored and alleviates problems with writing new + boot configurations. + + + + + Nixpkgs now contains + automatically + packaged GNOME Shell extensions from the + GNOME + Extensions portal. You can find them, filed by their + UUID, under gnome38Extensions attribute for + GNOME 3.38 and under gnome40Extensions for + GNOME 40. Finally, the gnomeExtensions + attribute contains extensions for the latest GNOME Shell + version in Nixpkgs, listed under a more human-friendly name. + The unqualified attribute scope also contains manually + packaged extensions. Note that the automatically packaged + extensions are provided for convenience and are not checked or + guaranteed to work. + + + + + Erlang/OTP versions older than R21 got dropped. We also + dropped the cuter package, as it was purely an example of how + to build a package. We also dropped lfe_1_2 + as it could not build with R21+. Moving forward, we expect to + only support 3 yearly releases of OTP. + + + +
+
diff --git a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2111.section.xml b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2111.section.xml index 7ac120b693..896a797cef 100644 --- a/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2111.section.xml +++ b/third_party/nixpkgs/nixos/doc/manual/from_md/release-notes/rl-2111.section.xml @@ -1,5 +1,5 @@ -
- Release 21.11 (<quote>?</quote>, 2021.11/??) +
+ Release 21.11 (“?”, 2021.11/??) In addition to numerous new and upgraded packages, this release has the following highlights: @@ -12,7 +12,7 @@ -
+
Highlights @@ -22,9 +22,9 @@
-
+
New Services - + geoipupdate, @@ -32,9 +32,25 @@ services.geoipupdate. + + + sourcehut, a + collection of tools useful for software development. Available + as + services.sourcehut. + + + + + ucarp, + an userspace implementation of the Common Address Redundancy + Protocol (CARP). Available as + networking.ucarp. + +
-
+
Backward Incompatibilities @@ -56,11 +72,300 @@ this version for the entire lifecycle of the 21.11 release. + + + Those making use of buildBazelPackage will + need to regenerate the fetch hashes (preferred), or set + fetchConfigured = false;. + + + + + consul was upgraded to a new major release + with breaking changes, see + upstream + changelog. + + + + + fsharp41 has been removed in preference to use the latest + dotnet-sdk + + + + + The following F#-related packages have been removed for being + unmaintaned. Please use fetchNuGet for + specific packages. + + + + + ExtCore + + + + + Fake + + + + + Fantomas + + + + + FsCheck + + + + + FsCheck262 + + + + + FsCheckNunit + + + + + FSharpAutoComplete + + + + + FSharpCompilerCodeDom + + + + + FSharpCompilerService + + + + + FSharpCompilerTools + + + + + FSharpCore302 + + + + + FSharpCore3125 + + + + + FSharpCore4001 + + + + + FSharpCore4117 + + + + + FSharpData + + + + + FSharpData225 + + + + + FSharpDataSQLProvider + + + + + FSharpFormatting + + + + + FsLexYacc + + + + + FsLexYacc706 + + + + + FsLexYaccRuntime + + + + + FsPickler + + + + + FsUnit + + + + + Projekt + + + + + Suave + + + + + UnionArgParser + + + + + ExcelDnaRegistration + + + + + MathNetNumerics + + + + + + + programs.x2goserver is now + services.x2goserver + + + + + The following dotnet-related packages have been removed for + being unmaintaned. Please use fetchNuGet + for specific packages. + + + + + Autofac + + + + + SystemValueTuple + + + + + MicrosoftDiaSymReader + + + + + MicrosoftDiaSymReaderPortablePdb + + + + + SystemCollectionsImmutable + + + + + SystemCollectionsImmutable131 + + + + + SystemReflectionMetadata + + + + + NUnit350 + + + + + Deedle + + + + + ExcelDna + + + + + GitVersionTree + + + + + NDeskOptions + + + + + + + + + The antlr package now defaults to the 4.x + release instead of the old 2.7.7 version. + + + + + The libwnck package now defaults to the 3.x + release instead of the old 2.31.0 version. + +
-
+
Other Notable Changes - - + + + + The setting + services.openssh.logLevel + "VERBOSE" + "INFO". This brings NixOS in line + with upstream and other Linux distributions, and reduces log + spam on servers due to bruteforcing botnets. + + + However, if + services.fail2ban.enable + is true, the fail2ban + will override the verbosity to + "VERBOSE", so that + fail2ban can observe the failed login + attempts from the SSH logs. + + + + + Sway: The terminal emulator rxvt-unicode is + no longer installed by default via + programs.sway.extraPackages. The current + default configuration uses alacritty (and + soon foot) so this is only an issue when + using a customized configuration and not installing + rxvt-unicode explicitly. + + +
diff --git a/third_party/nixpkgs/nixos/doc/manual/man-nixos-rebuild.xml b/third_party/nixpkgs/nixos/doc/manual/man-nixos-rebuild.xml index a5ea81bcda..2e1069828c 100644 --- a/third_party/nixpkgs/nixos/doc/manual/man-nixos-rebuild.xml +++ b/third_party/nixpkgs/nixos/doc/manual/man-nixos-rebuild.xml @@ -91,6 +91,10 @@ flake-uri + + input-name flake-uri + + diff --git a/third_party/nixpkgs/nixos/doc/manual/md-to-db.sh b/third_party/nixpkgs/nixos/doc/manual/md-to-db.sh index fc4be7da22..7949b42e8d 100755 --- a/third_party/nixpkgs/nixos/doc/manual/md-to-db.sh +++ b/third_party/nixpkgs/nixos/doc/manual/md-to-db.sh @@ -8,25 +8,31 @@ DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 && pwd )" pushd $DIR +# NOTE: Keep in sync with Nixpkgs manual (/doc/Makefile). +# TODO: Remove raw-attribute when we can get rid of DocBook altogether. +pandoc_commonmark_enabled_extensions=+attributes+fenced_divs+footnotes+bracketed_spans+definition_lists+pipe_tables+raw_attribute +pandoc_flags=( + # media extraction and diagram-generator.lua not needed + "--lua-filter=$DIR/../../../doc/labelless-link-is-xref.lua" + -f "commonmark${pandoc_commonmark_enabled_extensions}+smart" + -t docbook +) + OUT="$DIR/from_md" mapfile -t MD_FILES < <(find . -type f -regex '.*\.md$') for mf in ${MD_FILES[*]}; do if [ "${mf: -11}" == ".section.md" ]; then mkdir -p $(dirname "$OUT/$mf") - pandoc "$mf" -t docbook \ - --extract-media=media \ - -f markdown+smart \ - | cat > "$OUT/${mf%".section.md"}.section.xml" + pandoc "$mf" "${pandoc_flags[@]}" \ + -o "$OUT/${mf%".section.md"}.section.xml" fi if [ "${mf: -11}" == ".chapter.md" ]; then mkdir -p $(dirname "$OUT/$mf") - pandoc "$mf" -t docbook \ + pandoc "$mf" "${pandoc_flags[@]}" \ --top-level-division=chapter \ - --extract-media=media \ - -f markdown+smart \ - | cat > "$OUT/${mf%".chapter.md"}.chapter.xml" + -o "$OUT/${mf%".chapter.md"}.chapter.xml" fi done diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/release-notes.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/release-notes.xml index 6d7899f6dc..74ca57850e 100644 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/release-notes.xml +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/release-notes.xml @@ -9,19 +9,19 @@ current unstable revision. - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1310.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1310.section.md new file mode 100644 index 0000000000..9efd8f6e8a --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1310.section.md @@ -0,0 +1,3 @@ +# Release 13.10 ("Aardvark", 2013/10/31) {#sec-release-13.10} + +This is the first stable release branch of NixOS. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1310.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1310.xml deleted file mode 100644 index 248bab70c3..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1310.xml +++ /dev/null @@ -1,11 +0,0 @@ -
- Release 13.10 (“Aardvark”, 2013/10/31) - - - This is the first stable release branch of NixOS. - -
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1404.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1404.section.md new file mode 100644 index 0000000000..e0a70df3a6 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1404.section.md @@ -0,0 +1,81 @@ +# Release 14.04 ("Baboon", 2014/04/30) {#sec-release-14.04} + +This is the second stable release branch of NixOS. In addition to numerous new and upgraded packages and modules, this release has the following highlights: + +- Installation on UEFI systems is now supported. See [](#sec-installation) for details. + +- Systemd has been updated to version 212, which has [numerous improvements](http://cgit.freedesktop.org/systemd/systemd/plain/NEWS?id=v212). NixOS now automatically starts systemd user instances when you log in. You can define global user units through the `systemd.unit.*` options. + +- NixOS is now based on Glibc 2.19 and GCC 4.8. + +- The default Linux kernel has been updated to 3.12. + +- KDE has been updated to 4.12. + +- GNOME 3.10 experimental support has been added. + +- Nix has been updated to 1.7 ([details](https://nixos.org/nix/manual/#ssec-relnotes-1.7)). + +- NixOS now supports fully declarative management of users and groups. If you set `users.mutableUsers` to `false`, then the contents of `/etc/passwd` and `/etc/group` will be [congruent](https://www.usenix.org/legacy/event/lisa02/tech/full_papers/traugott/traugott_html/) to your NixOS configuration. For instance, if you remove a user from `users.extraUsers` and run `nixos-rebuild`, the user account will cease to exist. Also, imperative commands for managing users and groups, such as `useradd`, are no longer available. If `users.mutableUsers` is `true` (the default), then behaviour is unchanged from NixOS 13.10. + +- NixOS now has basic container support, meaning you can easily run a NixOS instance as a container in a NixOS host system. These containers are suitable for testing and experimentation but not production use, since they're not fully isolated from the host. See [](#ch-containers) for details. + +- Systemd units provided by packages can now be overridden from the NixOS configuration. For instance, if a package `foo` provides systemd units, you can say: + + ```nix + { + systemd.packages = [ pkgs.foo ]; + } + ``` + + to enable those units. You can then set or override unit options in the usual way, e.g. + + ```nix + { + systemd.services.foo.wantedBy = [ "multi-user.target" ]; + systemd.services.foo.serviceConfig.MemoryLimit = "512M"; + } + ``` + + When upgrading from a previous release, please be aware of the following incompatible changes: + +- Nixpkgs no longer exposes unfree packages by default. If your NixOS configuration requires unfree packages from Nixpkgs, you need to enable support for them explicitly by setting: + + ```nix + { + nixpkgs.config.allowUnfree = true; + } + ``` + + Otherwise, you get an error message such as: + + ```ShellSession + error: package ‘nvidia-x11-331.49-3.12.17’ in ‘…/nvidia-x11/default.nix:56’ + has an unfree license, refusing to evaluate + ``` + +- The Adobe Flash player is no longer enabled by default in the Firefox and Chromium wrappers. To enable it, you must set: + + ```nix + { + nixpkgs.config.allowUnfree = true; + nixpkgs.config.firefox.enableAdobeFlash = true; # for Firefox + nixpkgs.config.chromium.enableAdobeFlash = true; # for Chromium + } + ``` + +- The firewall is now enabled by default. If you don't want this, you need to disable it explicitly: + + ```nix + { + networking.firewall.enable = false; + } + ``` + +- The option `boot.loader.grub.memtest86` has been renamed to `boot.loader.grub.memtest86.enable`. + +- The `mysql55` service has been merged into the `mysql` service, which no longer sets a default for the option `services.mysql.package`. + +- Package variants are now differentiated by suffixing the name, rather than the version. For instance, `sqlite-3.8.4.3-interactive` is now called `sqlite-interactive-3.8.4.3`. This ensures that `nix-env -i sqlite` is unambiguous, and that `nix-env -u` won't "upgrade" `sqlite` to `sqlite-interactive` or vice versa. Notably, this change affects the Firefox wrapper (which provides plugins), as it is now called `firefox-wrapper`. So when using `nix-env`, you should do `nix-env -e firefox; nix-env -i firefox-wrapper` if you want to keep using the wrapper. This change does not affect declarative package management, since attribute names like `pkgs.firefoxWrapper` were already unambiguous. + +- The symlink `/etc/ca-bundle.crt` is gone. Programs should instead use the environment variable `OPENSSL_X509_CERT_FILE` (which points to `/etc/ssl/certs/ca-bundle.crt`). diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1404.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1404.xml deleted file mode 100644 index 56dbb74a71..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1404.xml +++ /dev/null @@ -1,179 +0,0 @@ -
- Release 14.04 (“Baboon”, 2014/04/30) - - - This is the second stable release branch of NixOS. In addition to numerous - new and upgraded packages and modules, this release has the following - highlights: - - - - Installation on UEFI systems is now supported. See - for details. - - - - - Systemd has been updated to version 212, which has - numerous - improvements. NixOS now automatically starts systemd user instances - when you log in. You can define global user units through the - options. - - - - - NixOS is now based on Glibc 2.19 and GCC 4.8. - - - - - The default Linux kernel has been updated to 3.12. - - - - - KDE has been updated to 4.12. - - - - - GNOME 3.10 experimental support has been added. - - - - - Nix has been updated to 1.7 - (details). - - - - - NixOS now supports fully declarative management of users and groups. If - you set to false, - then the contents of /etc/passwd and - /etc/group will be - congruent - to your NixOS configuration. For instance, if you remove a user from - and run - nixos-rebuild, the user account will cease to exist. - Also, imperative commands for managing users and groups, such as - useradd, are no longer available. If - is true (the - default), then behaviour is unchanged from NixOS 13.10. - - - - - NixOS now has basic container support, meaning you can easily run a NixOS - instance as a container in a NixOS host system. These containers are - suitable for testing and experimentation but not production use, since - they’re not fully isolated from the host. See - for details. - - - - - Systemd units provided by packages can now be overridden from the NixOS - configuration. For instance, if a package foo provides - systemd units, you can say: - -systemd.packages = [ pkgs.foo ]; - - to enable those units. You can then set or override unit options in the - usual way, e.g. - -systemd.services.foo.wantedBy = [ "multi-user.target" ]; -systemd.services.foo.serviceConfig.MemoryLimit = "512M"; - - - - - - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - Nixpkgs no longer exposes unfree packages by default. If your NixOS - configuration requires unfree packages from Nixpkgs, you need to enable - support for them explicitly by setting: - -nixpkgs.config.allowUnfree = true; - - Otherwise, you get an error message such as: - -error: package ‘nvidia-x11-331.49-3.12.17’ in ‘…/nvidia-x11/default.nix:56’ - has an unfree license, refusing to evaluate - - - - - - The Adobe Flash player is no longer enabled by default in the Firefox and - Chromium wrappers. To enable it, you must set: - -nixpkgs.config.allowUnfree = true; -nixpkgs.config.firefox.enableAdobeFlash = true; # for Firefox -nixpkgs.config.chromium.enableAdobeFlash = true; # for Chromium - - - - - - The firewall is now enabled by default. If you don’t want this, you need - to disable it explicitly: - -networking.firewall.enable = false; - - - - - - The option has been renamed to - . - - - - - The mysql55 service has been merged into the - mysql service, which no longer sets a default for the - option . - - - - - Package variants are now differentiated by suffixing the name, rather than - the version. For instance, sqlite-3.8.4.3-interactive - is now called sqlite-interactive-3.8.4.3. This - ensures that nix-env -i sqlite is unambiguous, and that - nix-env -u won’t “upgrade” - sqlite to sqlite-interactive or vice - versa. Notably, this change affects the Firefox wrapper (which provides - plugins), as it is now called firefox-wrapper. So when - using nix-env, you should do nix-env -e - firefox; nix-env -i firefox-wrapper if you want to keep using - the wrapper. This change does not affect declarative package management, - since attribute names like pkgs.firefoxWrapper were - already unambiguous. - - - - - The symlink /etc/ca-bundle.crt is gone. Programs - should instead use the environment variable - OPENSSL_X509_CERT_FILE (which points to - /etc/ssl/certs/ca-bundle.crt). - - - - -
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1412.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1412.section.md new file mode 100644 index 0000000000..683f1e45f0 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1412.section.md @@ -0,0 +1,171 @@ +# Release 14.12 ("Caterpillar", 2014/12/30) {#sec-release-14.12} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- Systemd has been updated to version 217, which has numerous [improvements.](http://lists.freedesktop.org/archives/systemd-devel/2014-October/024662.html) + +- [Nix has been updated to 1.8.](https://www.mail-archive.com/nix-dev@lists.science.uu.nl/msg13957.html) + +- NixOS is now based on Glibc 2.20. + +- KDE has been updated to 4.14. + +- The default Linux kernel has been updated to 3.14. + +- If `users.mutableUsers` is enabled (the default), changes made to the declaration of a user or group will be correctly realised when running `nixos-rebuild`. For instance, removing a user specification from `configuration.nix` will cause the actual user account to be deleted. If `users.mutableUsers` is disabled, it is no longer necessary to specify UIDs or GIDs; if omitted, they are allocated dynamically. + +Following new services were added since the last release: + +- `atftpd` + +- `bosun` + +- `bspwm` + +- `chronos` + +- `collectd` + +- `consul` + +- `cpuminer-cryptonight` + +- `crashplan` + +- `dnscrypt-proxy` + +- `docker-registry` + +- `docker` + +- `etcd` + +- `fail2ban` + +- `fcgiwrap` + +- `fleet` + +- `fluxbox` + +- `gdm` + +- `geoclue2` + +- `gitlab` + +- `gitolite` + +- `gnome3.gnome-documents` + +- `gnome3.gnome-online-miners` + +- `gnome3.gvfs` + +- `gnome3.seahorse` + +- `hbase` + +- `i2pd` + +- `influxdb` + +- `kubernetes` + +- `liquidsoap` + +- `lxc` + +- `mailpile` + +- `mesos` + +- `mlmmj` + +- `monetdb` + +- `mopidy` + +- `neo4j` + +- `nsd` + +- `openntpd` + +- `opentsdb` + +- `openvswitch` + +- `parallels-guest` + +- `peerflix` + +- `phd` + +- `polipo` + +- `prosody` + +- `radicale` + +- `redmine` + +- `riemann` + +- `scollector` + +- `seeks` + +- `siproxd` + +- `strongswan` + +- `tcsd` + +- `teamspeak3` + +- `thermald` + +- `torque/mrom` + +- `torque/server` + +- `uhub` + +- `unifi` + +- `znc` + +- `zookeeper` + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- The default version of Apache httpd is now 2.4. If you use the `extraConfig` option to pass literal Apache configuration text, you may need to update it --- see [Apache's documentation](http://httpd.apache.org/docs/2.4/upgrading.html) for details. If you wish to continue to use httpd 2.2, add the following line to your NixOS configuration: + + ```nix + { + services.httpd.package = pkgs.apacheHttpd_2_2; + } + ``` + +- PHP 5.3 has been removed because it is no longer supported by the PHP project. A [migration guide](http://php.net/migration54) is available. + +- The host side of a container virtual Ethernet pair is now called `ve-container-name` rather than `c-container-name`. + +- GNOME 3.10 support has been dropped. The default GNOME version is now 3.12. + +- VirtualBox has been upgraded to 4.3.20 release. Users may be required to run `rm -rf /tmp/.vbox*`. The line `imports = [ ]` is no longer necessary, use `services.virtualboxHost.enable = true` instead. + + Also, hardening mode is now enabled by default, which means that unless you want to use USB support, you no longer need to be a member of the `vboxusers` group. + +- Chromium has been updated to 39.0.2171.65. `enablePepperPDF` is now enabled by default. `chromium*Wrapper` packages no longer exist, because upstream removed NSAPI support. `chromium-stable` has been renamed to `chromium`. + +- Python packaging documentation is now part of nixpkgs manual. To override the python packages available to a custom python you now use `pkgs.pythonFull.buildEnv.override` instead of `pkgs.pythonFull.override`. + +- `boot.resumeDevice = "8:6"` is no longer supported. Most users will want to leave it undefined, which takes the swap partitions automatically. There is an evaluation assertion to ensure that the string starts with a slash. + +- The system-wide default timezone for NixOS installations changed from `CET` to `UTC`. To choose a different timezone for your system, configure `time.timeZone` in `configuration.nix`. A fairly complete list of possible values for that setting is available at . + +- GNU screen has been updated to 4.2.1, which breaks the ability to connect to sessions created by older versions of screen. + +- The Intel GPU driver was updated to the 3.x prerelease version (used by most distributions) and supports DRI3 now. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1412.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1412.xml deleted file mode 100644 index 139f61c2a5..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1412.xml +++ /dev/null @@ -1,467 +0,0 @@ -
- Release 14.12 (“Caterpillar”, 2014/12/30) - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - Systemd has been updated to version 217, which has numerous - improvements. - - - - - - Nix has been updated to 1.8. - - - - - NixOS is now based on Glibc 2.20. - - - - - KDE has been updated to 4.14. - - - - - The default Linux kernel has been updated to 3.14. - - - - - If is enabled (the default), changes - made to the declaration of a user or group will be correctly realised when - running nixos-rebuild. For instance, removing a user - specification from configuration.nix will cause the - actual user account to be deleted. If - is disabled, it is no longer necessary to specify UIDs or GIDs; if - omitted, they are allocated dynamically. - - - - - - - Following new services were added since the last release: - - - - atftpd - - - - - bosun - - - - - bspwm - - - - - chronos - - - - - collectd - - - - - consul - - - - - cpuminer-cryptonight - - - - - crashplan - - - - - dnscrypt-proxy - - - - - docker-registry - - - - - docker - - - - - etcd - - - - - fail2ban - - - - - fcgiwrap - - - - - fleet - - - - - fluxbox - - - - - gdm - - - - - geoclue2 - - - - - gitlab - - - - - gitolite - - - - - gnome3.gnome-documents - - - - - gnome3.gnome-online-miners - - - - - gnome3.gvfs - - - - - gnome3.seahorse - - - - - hbase - - - - - i2pd - - - - - influxdb - - - - - kubernetes - - - - - liquidsoap - - - - - lxc - - - - - mailpile - - - - - mesos - - - - - mlmmj - - - - - monetdb - - - - - mopidy - - - - - neo4j - - - - - nsd - - - - - openntpd - - - - - opentsdb - - - - - openvswitch - - - - - parallels-guest - - - - - peerflix - - - - - phd - - - - - polipo - - - - - prosody - - - - - radicale - - - - - redmine - - - - - riemann - - - - - scollector - - - - - seeks - - - - - siproxd - - - - - strongswan - - - - - tcsd - - - - - teamspeak3 - - - - - thermald - - - - - torque/mrom - - - - - torque/server - - - - - uhub - - - - - unifi - - - - - znc - - - - - zookeeper - - - - - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - The default version of Apache httpd is now 2.4. If you use the - option to pass literal Apache configuration - text, you may need to update it — see - Apache’s - documentation for details. If you wish to continue to use httpd - 2.2, add the following line to your NixOS configuration: - -services.httpd.package = pkgs.apacheHttpd_2_2; - - - - - - PHP 5.3 has been removed because it is no longer supported by the PHP - project. A migration - guide is available. - - - - - The host side of a container virtual Ethernet pair is now called - ve-container-name rather - than c-container-name. - - - - - GNOME 3.10 support has been dropped. The default GNOME version is now - 3.12. - - - - - VirtualBox has been upgraded to 4.3.20 release. Users may be required to - run rm -rf /tmp/.vbox*. The line imports = [ - <nixpkgs/nixos/modules/programs/virtualbox.nix> ] is no - longer necessary, use services.virtualboxHost.enable = - true instead. - - - Also, hardening mode is now enabled by default, which means that unless - you want to use USB support, you no longer need to be a member of the - vboxusers group. - - - - - Chromium has been updated to 39.0.2171.65. - is now enabled by default. - chromium*Wrapper packages no longer exist, because - upstream removed NSAPI support. chromium-stable has - been renamed to chromium. - - - - - Python packaging documentation is now part of nixpkgs manual. To override - the python packages available to a custom python you now use - pkgs.pythonFull.buildEnv.override instead of - pkgs.pythonFull.override. - - - - - boot.resumeDevice = "8:6" is no longer supported. Most - users will want to leave it undefined, which takes the swap partitions - automatically. There is an evaluation assertion to ensure that the string - starts with a slash. - - - - - The system-wide default timezone for NixOS installations changed from - CET to UTC. To choose a different - timezone for your system, configure time.timeZone in - configuration.nix. A fairly complete list of possible - values for that setting is available at - . - - - - - GNU screen has been updated to 4.2.1, which breaks the ability to connect - to sessions created by older versions of screen. - - - - - The Intel GPU driver was updated to the 3.x prerelease version (used by - most distributions) and supports DRI3 now. - - - - -
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1509.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1509.section.md new file mode 100644 index 0000000000..55804ddb98 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1509.section.md @@ -0,0 +1,319 @@ +# Release 15.09 ("Dingo", 2015/09/30) {#sec-release-15.09} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- The [Haskell](http://haskell.org/) packages infrastructure has been re-designed from the ground up (\"Haskell NG\"). NixOS now distributes the latest version of every single package registered on [Hackage](http://hackage.haskell.org/) \-- well in excess of 8,000 Haskell packages. Detailed instructions on how to use that infrastructure can be found in the [User\'s Guide to the Haskell Infrastructure](https://nixos.org/nixpkgs/manual/#users-guide-to-the-haskell-infrastructure). Users migrating from an earlier release may find helpful information below, in the list of backwards-incompatible changes. Furthermore, we distribute 51(!) additional Haskell package sets that provide every single [LTS Haskell](http://www.stackage.org/) release since version 0.0 as well as the most recent [Stackage Nightly](http://www.stackage.org/) snapshot. The announcement [\"Full Stackage Support in Nixpkgs\"](https://nixos.org/nix-dev/2015-September/018138.html) gives additional details. + +- Nix has been updated to version 1.10, which among other improvements enables cryptographic signatures on binary caches for improved security. + +- You can now keep your NixOS system up to date automatically by setting + +```nix +{ + system.autoUpgrade.enable = true; +} +``` + +This will cause the system to periodically check for updates in your current channel and run `nixos-rebuild`. + +- This release is based on Glibc 2.21, GCC 4.9 and Linux 3.18. + +- GNOME has been upgraded to 3.16. + +- Xfce has been upgraded to 4.12. + +- KDE 5 has been upgraded to KDE Frameworks 5.10, Plasma 5.3.2 and Applications 15.04.3. KDE 4 has been updated to kdelibs-4.14.10. + +- E19 has been upgraded to 0.16.8.15. + +The following new services were added since the last release: + +- `services/mail/exim.nix` + +- `services/misc/apache-kafka.nix` + +- `services/misc/canto-daemon.nix` + +- `services/misc/confd.nix` + +- `services/misc/devmon.nix` + +- `services/misc/gitit.nix` + +- `services/misc/ihaskell.nix` + +- `services/misc/mbpfan.nix` + +- `services/misc/mediatomb.nix` + +- `services/misc/mwlib.nix` + +- `services/misc/parsoid.nix` + +- `services/misc/plex.nix` + +- `services/misc/ripple-rest.nix` + +- `services/misc/ripple-data-api.nix` + +- `services/misc/subsonic.nix` + +- `services/misc/sundtek.nix` + +- `services/monitoring/cadvisor.nix` + +- `services/monitoring/das_watchdog.nix` + +- `services/monitoring/grafana.nix` + +- `services/monitoring/riemann-tools.nix` + +- `services/monitoring/teamviewer.nix` + +- `services/network-filesystems/u9fs.nix` + +- `services/networking/aiccu.nix` + +- `services/networking/asterisk.nix` + +- `services/networking/bird.nix` + +- `services/networking/charybdis.nix` + +- `services/networking/docker-registry-server.nix` + +- `services/networking/fan.nix` + +- `services/networking/firefox/sync-server.nix` + +- `services/networking/gateone.nix` + +- `services/networking/heyefi.nix` + +- `services/networking/i2p.nix` + +- `services/networking/lambdabot.nix` + +- `services/networking/mstpd.nix` + +- `services/networking/nix-serve.nix` + +- `services/networking/nylon.nix` + +- `services/networking/racoon.nix` + +- `services/networking/skydns.nix` + +- `services/networking/shout.nix` + +- `services/networking/softether.nix` + +- `services/networking/sslh.nix` + +- `services/networking/tinc.nix` + +- `services/networking/tlsdated.nix` + +- `services/networking/tox-bootstrapd.nix` + +- `services/networking/tvheadend.nix` + +- `services/networking/zerotierone.nix` + +- `services/scheduling/marathon.nix` + +- `services/security/fprintd.nix` + +- `services/security/hologram.nix` + +- `services/security/munge.nix` + +- `services/system/cloud-init.nix` + +- `services/web-servers/shellinabox.nix` + +- `services/web-servers/uwsgi.nix` + +- `services/x11/unclutter.nix` + +- `services/x11/display-managers/sddm.nix` + +- `system/boot/coredump.nix` + +- `system/boot/loader/loader.nix` + +- `system/boot/loader/generic-extlinux-compatible` + +- `system/boot/networkd.nix` + +- `system/boot/resolved.nix` + +- `system/boot/timesyncd.nix` + +- `tasks/filesystems/exfat.nix` + +- `tasks/filesystems/ntfs.nix` + +- `tasks/filesystems/vboxsf.nix` + +- `virtualisation/virtualbox-host.nix` + +- `virtualisation/vmware-guest.nix` + +- `virtualisation/xen-dom0.nix` + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- `sshd` no longer supports DSA and ECDSA host keys by default. If you have existing systems with such host keys and want to continue to use them, please set + +```nix +{ + system.stateVersion = "14.12"; +} +``` + +The new option `system.stateVersion` ensures that certain configuration changes that could break existing systems (such as the `sshd` host key setting) will maintain compatibility with the specified NixOS release. NixOps sets the state version of existing deployments automatically. + +- `cron` is no longer enabled by default, unless you have a non-empty `services.cron.systemCronJobs`. To force `cron` to be enabled, set `services.cron.enable = true`. + +- Nix now requires binary caches to be cryptographically signed. If you have unsigned binary caches that you want to continue to use, you should set `nix.requireSignedBinaryCaches = false`. + +- Steam now doesn\'t need root rights to work. Instead of using `*-steam-chrootenv`, you should now just run `steam`. `steamChrootEnv` package was renamed to `steam`, and old `steam` package \-- to `steamOriginal`. + +- CMPlayer has been renamed to bomi upstream. Package `cmplayer` was accordingly renamed to `bomi` + +- Atom Shell has been renamed to Electron upstream. Package `atom-shell` was accordingly renamed to `electron` + +- Elm is not released on Hackage anymore. You should now use `elmPackages.elm` which contains the latest Elm platform. + +- The CUPS printing service has been updated to version `2.0.2`. Furthermore its systemd service has been renamed to `cups.service`. + + Local printers are no longer shared or advertised by default. This behavior can be changed by enabling `services.printing.defaultShared` or `services.printing.browsing` respectively. + +- The VirtualBox host and guest options have been named more consistently. They can now found in `virtualisation.virtualbox.host.*` instead of `services.virtualboxHost.*` and `virtualisation.virtualbox.guest.*` instead of `services.virtualboxGuest.*`. + + Also, there now is support for the `vboxsf` file system using the `fileSystems` configuration attribute. An example of how this can be used in a configuration: + +```nix +{ + fileSystems."/shiny" = { + device = "myshinysharedfolder"; + fsType = "vboxsf"; + }; +} +``` + +- \"`nix-env -qa`\" no longer discovers Haskell packages by name. The only packages visible in the global scope are `ghc`, `cabal-install`, and `stack`, but all other packages are hidden. The reason for this inconvenience is the sheer size of the Haskell package set. Name-based lookups are expensive, and most `nix-env -qa` operations would become much slower if we\'d add the entire Hackage database into the top level attribute set. Instead, the list of Haskell packages can be displayed by running: + +```ShellSession +nix-env -f "" -qaP -A haskellPackages +``` + +Executable programs written in Haskell can be installed with: + +```ShellSession +nix-env -f "" -iA haskellPackages.pandoc +``` + +Installing Haskell _libraries_ this way, however, is no longer supported. See the next item for more details. + +- Previous versions of NixOS came with a feature called `ghc-wrapper`, a small script that allowed GHC to transparently pick up on libraries installed in the user\'s profile. This feature has been deprecated; `ghc-wrapper` was removed from the distribution. The proper way to register Haskell libraries with the compiler now is the `haskellPackages.ghcWithPackages` function. The [User\'s Guide to the Haskell Infrastructure](https://nixos.org/nixpkgs/manual/#users-guide-to-the-haskell-infrastructure) provides more information about this subject. + +- All Haskell builds that have been generated with version 1.x of the `cabal2nix` utility are now invalid and need to be re-generated with a current version of `cabal2nix` to function. The most recent version of this tool can be installed by running `nix-env -i cabal2nix`. + +- The `haskellPackages` set in Nixpkgs used to have a function attribute called `extension` that users could override in their `~/.nixpkgs/config.nix` files to configure additional attributes, etc. That function still exists, but it\'s now called `overrides`. + +- The OpenBLAS library has been updated to version `0.2.14`. Support for the `x86_64-darwin` platform was added. Dynamic architecture detection was enabled; OpenBLAS now selects microarchitecture-optimized routines at runtime, so optimal performance is achieved without the need to rebuild OpenBLAS locally. OpenBLAS has replaced ATLAS in most packages which use an optimized BLAS or LAPACK implementation. + +- The `phpfpm` is now using the default PHP version (`pkgs.php`) instead of PHP 5.4 (`pkgs.php54`). + +- The `locate` service no longer indexes the Nix store by default, preventing packages with potentially numerous versions from cluttering the output. Indexing the store can be activated by setting `services.locate.includeStore = true`. + +- The Nix expression search path (`NIX_PATH`) no longer contains `/etc/nixos/nixpkgs` by default. You can override `NIX_PATH` by setting `nix.nixPath`. + +- Python 2.6 has been marked as broken (as it no longer receives security updates from upstream). + +- Any use of module arguments such as `pkgs` to access library functions, or to define `imports` attributes will now lead to an infinite loop at the time of the evaluation. + + In case of an infinite loop, use the `--show-trace` command line argument and read the line just above the error message. + + ```ShellSession + $ nixos-rebuild build --show-trace + … + while evaluating the module argument `pkgs' in "/etc/nixos/my-module.nix": + infinite recursion encountered + ``` + + Any use of `pkgs.lib`, should be replaced by `lib`, after adding it as argument of the module. The following module + + ```nix + { config, pkgs, ... }: + + with pkgs.lib; + + { + options = { + foo = mkOption { … }; + }; + config = mkIf config.foo { … }; + } + ``` + + should be modified to look like: + + ```nix + { config, pkgs, lib, ... }: + + with lib; + + { + options = { + foo = mkOption { option declaration }; + }; + config = mkIf config.foo { option definition }; + } + ``` + + When `pkgs` is used to download other projects to import their modules, and only in such cases, it should be replaced by `(import {})`. The following module + + ```nix + { config, pkgs, ... }: + + let + myProject = pkgs.fetchurl { + src = url; + sha256 = hash; + }; + in + + { + imports = [ "${myProject}/module.nix" ]; + } + ``` + + should be modified to look like: + + ```nix + { config, pkgs, ... }: + + let + myProject = (import {}).fetchurl { + src = url; + sha256 = hash; + }; + in + + { + imports = [ "${myProject}/module.nix" ]; + } + ``` + +Other notable improvements: + +- The nixos and nixpkgs channels were unified, so one _can_ use `nix-env -iA nixos.bash` instead of `nix-env -iA nixos.pkgs.bash`. See [the commit](https://github.com/NixOS/nixpkgs/commit/2cd7c1f198) for details. + +- Users running an SSH server who worry about the quality of their `/etc/ssh/moduli` file with respect to the [vulnerabilities discovered in the Diffie-Hellman key exchange](https://stribika.github.io/2015/01/04/secure-secure-shell.html) can now replace OpenSSH\'s default version with one they generated themselves using the new `services.openssh.moduliFile` option. + +- A newly packaged TeX Live 2015 is provided in `pkgs.texlive`, split into 6500 nix packages. For basic user documentation see [the source](https://github.com/NixOS/nixpkgs/blob/release-15.09/pkgs/tools/typesetting/tex/texlive/default.nix#L1). Beware of [an issue](https://github.com/NixOS/nixpkgs/issues/9757) when installing a too large package set. The plan is to deprecate and maybe delete the original TeX packages until the next release. + +- `buildEnv.env` on all Python interpreters is now available for nix-shell interoperability. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1509.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1509.xml deleted file mode 100644 index 098c8c5095..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1509.xml +++ /dev/null @@ -1,750 +0,0 @@ -
- Release 15.09 (“Dingo”, 2015/09/30) - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - - - The Haskell packages - infrastructure has been re-designed from the ground up ("Haskell - NG"). NixOS now distributes the latest version of every single package - registered on - Hackage -- well - in excess of 8,000 Haskell packages. Detailed instructions on how to use - that infrastructure can be found in the - User's - Guide to the Haskell Infrastructure. Users migrating from an earlier - release may find helpful information below, in the list of - backwards-incompatible changes. Furthermore, we distribute 51(!) additional - Haskell package sets that provide every single - LTS Haskell release - since version 0.0 as well as the most recent - Stackage Nightly - snapshot. The announcement - "Full - Stackage Support in Nixpkgs" gives additional details. - - - - - Nix has been updated to version 1.10, which among other improvements - enables cryptographic signatures on binary caches for improved security. - - - - - You can now keep your NixOS system up to date automatically by setting - -system.autoUpgrade.enable = true; - - This will cause the system to periodically check for updates in your - current channel and run nixos-rebuild. - - - - - This release is based on Glibc 2.21, GCC 4.9 and Linux 3.18. - - - - - GNOME has been upgraded to 3.16. - - - - - Xfce has been upgraded to 4.12. - - - - - KDE 5 has been upgraded to KDE Frameworks 5.10, Plasma 5.3.2 and - Applications 15.04.3. KDE 4 has been updated to kdelibs-4.14.10. - - - - - E19 has been upgraded to 0.16.8.15. - - - - - - The following new services were added since the last release: - - - - services/mail/exim.nix - - - - - services/misc/apache-kafka.nix - - - - - services/misc/canto-daemon.nix - - - - - services/misc/confd.nix - - - - - services/misc/devmon.nix - - - - - services/misc/gitit.nix - - - - - services/misc/ihaskell.nix - - - - - services/misc/mbpfan.nix - - - - - services/misc/mediatomb.nix - - - - - services/misc/mwlib.nix - - - - - services/misc/parsoid.nix - - - - - services/misc/plex.nix - - - - - services/misc/ripple-rest.nix - - - - - services/misc/ripple-data-api.nix - - - - - services/misc/subsonic.nix - - - - - services/misc/sundtek.nix - - - - - services/monitoring/cadvisor.nix - - - - - services/monitoring/das_watchdog.nix - - - - - services/monitoring/grafana.nix - - - - - services/monitoring/riemann-tools.nix - - - - - services/monitoring/teamviewer.nix - - - - - services/network-filesystems/u9fs.nix - - - - - services/networking/aiccu.nix - - - - - services/networking/asterisk.nix - - - - - services/networking/bird.nix - - - - - services/networking/charybdis.nix - - - - - services/networking/docker-registry-server.nix - - - - - services/networking/fan.nix - - - - - services/networking/firefox/sync-server.nix - - - - - services/networking/gateone.nix - - - - - services/networking/heyefi.nix - - - - - services/networking/i2p.nix - - - - - services/networking/lambdabot.nix - - - - - services/networking/mstpd.nix - - - - - services/networking/nix-serve.nix - - - - - services/networking/nylon.nix - - - - - services/networking/racoon.nix - - - - - services/networking/skydns.nix - - - - - services/networking/shout.nix - - - - - services/networking/softether.nix - - - - - services/networking/sslh.nix - - - - - services/networking/tinc.nix - - - - - services/networking/tlsdated.nix - - - - - services/networking/tox-bootstrapd.nix - - - - - services/networking/tvheadend.nix - - - - - services/networking/zerotierone.nix - - - - - services/scheduling/marathon.nix - - - - - services/security/fprintd.nix - - - - - services/security/hologram.nix - - - - - services/security/munge.nix - - - - - services/system/cloud-init.nix - - - - - services/web-servers/shellinabox.nix - - - - - services/web-servers/uwsgi.nix - - - - - services/x11/unclutter.nix - - - - - services/x11/display-managers/sddm.nix - - - - - system/boot/coredump.nix - - - - - system/boot/loader/loader.nix - - - - - system/boot/loader/generic-extlinux-compatible - - - - - system/boot/networkd.nix - - - - - system/boot/resolved.nix - - - - - system/boot/timesyncd.nix - - - - - tasks/filesystems/exfat.nix - - - - - tasks/filesystems/ntfs.nix - - - - - tasks/filesystems/vboxsf.nix - - - - - virtualisation/virtualbox-host.nix - - - - - virtualisation/vmware-guest.nix - - - - - virtualisation/xen-dom0.nix - - - - - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - sshd no longer supports DSA and ECDSA host keys by - default. If you have existing systems with such host keys and want to - continue to use them, please set - -system.stateVersion = "14.12"; - - The new option ensures that certain - configuration changes that could break existing systems (such as the - sshd host key setting) will maintain compatibility with - the specified NixOS release. NixOps sets the state version of existing - deployments automatically. - - - - - cron is no longer enabled by default, unless you have a - non-empty . To force - cron to be enabled, set . - - - - - Nix now requires binary caches to be cryptographically signed. If you have - unsigned binary caches that you want to continue to use, you should set - . - - - - - Steam now doesn't need root rights to work. Instead of using - *-steam-chrootenv, you should now just run - steam. steamChrootEnv package was - renamed to steam, and old steam - package -- to steamOriginal. - - - - - CMPlayer has been renamed to bomi upstream. Package - cmplayer was accordingly renamed to - bomi - - - - - Atom Shell has been renamed to Electron upstream. Package - atom-shell was accordingly renamed to - electron - - - - - Elm is not released on Hackage anymore. You should now use - elmPackages.elm which contains the latest Elm platform. - - - - - The CUPS printing service has been updated to version - 2.0.2. Furthermore its systemd service has been renamed - to cups.service. - - - Local printers are no longer shared or advertised by default. This - behavior can be changed by enabling - or - respectively. - - - - - The VirtualBox host and guest options have been named more consistently. - They can now found in - instead of and - instead of - . - - - Also, there now is support for the vboxsf file system - using the configuration attribute. An example - of how this can be used in a configuration: - -fileSystems."/shiny" = { - device = "myshinysharedfolder"; - fsType = "vboxsf"; -}; - - - - - - "nix-env -qa" no longer discovers Haskell - packages by name. The only packages visible in the global scope are - ghc, cabal-install, and - stack, but all other packages are hidden. The reason - for this inconvenience is the sheer size of the Haskell package set. - Name-based lookups are expensive, and most nix-env -qa - operations would become much slower if we'd add the entire Hackage - database into the top level attribute set. Instead, the list of Haskell - packages can be displayed by running: - - -nix-env -f "<nixpkgs>" -qaP -A haskellPackages - - - Executable programs written in Haskell can be installed with: - - -nix-env -f "<nixpkgs>" -iA haskellPackages.pandoc - - - Installing Haskell libraries this way, however, is no - longer supported. See the next item for more details. - - - - - Previous versions of NixOS came with a feature called - ghc-wrapper, a small script that allowed GHC to - transparently pick up on libraries installed in the user's profile. This - feature has been deprecated; ghc-wrapper was removed - from the distribution. The proper way to register Haskell libraries with - the compiler now is the haskellPackages.ghcWithPackages - function. The - User's - Guide to the Haskell Infrastructure provides more information about - this subject. - - - - - All Haskell builds that have been generated with version 1.x of the - cabal2nix utility are now invalid and need to be - re-generated with a current version of cabal2nix to - function. The most recent version of this tool can be installed by running - nix-env -i cabal2nix. - - - - - The haskellPackages set in Nixpkgs used to have a - function attribute called extension that users could - override in their ~/.nixpkgs/config.nix files to - configure additional attributes, etc. That function still exists, but it's - now called overrides. - - - - - The OpenBLAS library has been updated to version - 0.2.14. Support for the - x86_64-darwin platform was added. Dynamic architecture - detection was enabled; OpenBLAS now selects microarchitecture-optimized - routines at runtime, so optimal performance is achieved without the need - to rebuild OpenBLAS locally. OpenBLAS has replaced ATLAS in most packages - which use an optimized BLAS or LAPACK implementation. - - - - - The phpfpm is now using the default PHP version - (pkgs.php) instead of PHP 5.4 - (pkgs.php54). - - - - - The locate service no longer indexes the Nix store by - default, preventing packages with potentially numerous versions from - cluttering the output. Indexing the store can be activated by setting - . - - - - - The Nix expression search path (NIX_PATH) no longer - contains /etc/nixos/nixpkgs by default. You can - override NIX_PATH by setting . - - - - - Python 2.6 has been marked as broken (as it no longer receives security - updates from upstream). - - - - - Any use of module arguments such as pkgs to access - library functions, or to define imports attributes will - now lead to an infinite loop at the time of the evaluation. - - - In case of an infinite loop, use the --show-trace - command line argument and read the line just above the error message. - -$ nixos-rebuild build --show-trace -… -while evaluating the module argument `pkgs' in "/etc/nixos/my-module.nix": -infinite recursion encountered - - - - Any use of pkgs.lib, should be replaced by - lib, after adding it as argument of the module. The - following module - -{ config, pkgs, ... }: - -with pkgs.lib; - -{ - options = { - foo = mkOption { … }; - }; - config = mkIf config.foo { … }; -} - - should be modified to look like: - -{ config, pkgs, lib, ... }: - -with lib; - -{ - options = { - foo = mkOption { option declaration }; - }; - config = mkIf config.foo { option definition }; -} - - - - When pkgs is used to download other projects to import - their modules, and only in such cases, it should be replaced by - (import <nixpkgs> {}). The following module - -{ config, pkgs, ... }: - -let - myProject = pkgs.fetchurl { - src = url; - sha256 = hash; - }; -in - -{ - imports = [ "${myProject}/module.nix" ]; -} - - should be modified to look like: - -{ config, pkgs, ... }: - -let - myProject = (import <nixpkgs> {}).fetchurl { - src = url; - sha256 = hash; - }; -in - -{ - imports = [ "${myProject}/module.nix" ]; -} - - - - - - - - Other notable improvements: - - - - The nixos and nixpkgs channels were unified, so one - can use nix-env -iA nixos.bash - instead of nix-env -iA nixos.pkgs.bash. See - the - commit for details. - - - - - Users running an SSH server who worry about the quality of their - /etc/ssh/moduli file with respect to the - vulnerabilities - discovered in the Diffie-Hellman key exchange can now replace - OpenSSH's default version with one they generated themselves using the new - option. - - - - - A newly packaged TeX Live 2015 is provided in - pkgs.texlive, split into 6500 nix packages. For basic - user documentation see - the - source. Beware of - an - issue when installing a too large package set. The plan is to - deprecate and maybe delete the original TeX packages until the next - release. - - - - - on all Python interpreters is now available - for nix-shell interoperability. - - - - -
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1603.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1603.section.md new file mode 100644 index 0000000000..dce879ec16 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1603.section.md @@ -0,0 +1,282 @@ +# Release 16.03 ("Emu", 2016/03/31) {#sec-release-16.03} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- Systemd 229, bringing [numerous improvements](https://github.com/systemd/systemd/blob/v229/NEWS) over 217. + +- Linux 4.4 (was 3.18). + +- GCC 5.3 (was 4.9). Note that GCC 5 [changes the C++ ABI in an incompatible way](https://gcc.gnu.org/onlinedocs/libstdc++/manual/using_dual_abi.html); this may cause problems if you try to link objects compiled with different versions of GCC. + +- Glibc 2.23 (was 2.21). + +- Binutils 2.26 (was 2.23.1). See \#909 + +- Improved support for ensuring [bitwise reproducible builds](https://reproducible-builds.org/). For example, `stdenv` now sets the environment variable `SOURCE_DATE_EPOCH` to a deterministic value, and Nix has [gained an option](https://nixos.org/nix/manual/#ssec-relnotes-1.11) to repeat a build a number of times to test determinism. An ongoing project, the goal of exact reproducibility is to allow binaries to be verified independently (e.g., a user might only trust binaries that appear in three independent binary caches). + +- Perl 5.22. + +The following new services were added since the last release: + +- `services/monitoring/longview.nix` + +- `hardware/video/webcam/facetimehd.nix` + +- `i18n/input-method/default.nix` + +- `i18n/input-method/fcitx.nix` + +- `i18n/input-method/ibus.nix` + +- `i18n/input-method/nabi.nix` + +- `i18n/input-method/uim.nix` + +- `programs/fish.nix` + +- `security/acme.nix` + +- `security/audit.nix` + +- `security/oath.nix` + +- `services/hardware/irqbalance.nix` + +- `services/mail/dspam.nix` + +- `services/mail/opendkim.nix` + +- `services/mail/postsrsd.nix` + +- `services/mail/rspamd.nix` + +- `services/mail/rmilter.nix` + +- `services/misc/autofs.nix` + +- `services/misc/bepasty.nix` + +- `services/misc/calibre-server.nix` + +- `services/misc/cfdyndns.nix` + +- `services/misc/gammu-smsd.nix` + +- `services/misc/mathics.nix` + +- `services/misc/matrix-synapse.nix` + +- `services/misc/octoprint.nix` + +- `services/monitoring/hdaps.nix` + +- `services/monitoring/heapster.nix` + +- `services/monitoring/longview.nix` + +- `services/network-filesystems/netatalk.nix` + +- `services/network-filesystems/xtreemfs.nix` + +- `services/networking/autossh.nix` + +- `services/networking/dnschain.nix` + +- `services/networking/gale.nix` + +- `services/networking/miniupnpd.nix` + +- `services/networking/namecoind.nix` + +- `services/networking/ostinato.nix` + +- `services/networking/pdnsd.nix` + +- `services/networking/shairport-sync.nix` + +- `services/networking/supplicant.nix` + +- `services/search/kibana.nix` + +- `services/security/haka.nix` + +- `services/security/physlock.nix` + +- `services/web-apps/pump.io.nix` + +- `services/x11/hardware/libinput.nix` + +- `services/x11/window-managers/windowlab.nix` + +- `system/boot/initrd-network.nix` + +- `system/boot/initrd-ssh.nix` + +- `system/boot/loader/loader.nix` + +- `system/boot/networkd.nix` + +- `system/boot/resolved.nix` + +- `virtualisation/lxd.nix` + +- `virtualisation/rkt.nix` + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- We no longer produce graphical ISO images and VirtualBox images for `i686-linux`. A minimal ISO image is still provided. + +- Firefox and similar browsers are now _wrapped by default_. The package and attribute names are plain `firefox` or `midori`, etc. Backward-compatibility attributes were set up, but note that `nix-env -u` will _not_ update your current `firefox-with-plugins`; you have to uninstall it and install `firefox` instead. + +- `wmiiSnap` has been replaced with `wmii_hg`, but `services.xserver.windowManager.wmii.enable` has been updated respectively so this only affects you if you have explicitly installed `wmiiSnap`. + +- `jobs` NixOS option has been removed. It served as compatibility layer between Upstart jobs and SystemD services. All services have been rewritten to use `systemd.services` + +- `wmiimenu` is removed, as it has been removed by the developers upstream. Use `wimenu` from the `wmii-hg` package. + +- Gitit is no longer automatically added to the module list in NixOS and as such there will not be any manual entries for it. You will need to add an import statement to your NixOS configuration in order to use it, e.g. + + ```nix + { + imports = [ ]; + } + ``` + + will include the Gitit service configuration options. + +- `nginx` does not accept flags for enabling and disabling modules anymore. Instead it accepts `modules` argument, which is a list of modules to be built in. All modules now reside in `nginxModules` set. Example configuration: + + ```nix + nginx.override { + modules = [ nginxModules.rtmp nginxModules.dav nginxModules.moreheaders ]; + } + ``` + +- `s3sync` is removed, as it hasn\'t been developed by upstream for 4 years and only runs with ruby 1.8. For an actively-developer alternative look at `tarsnap` and others. + +- `ruby_1_8` has been removed as it\'s not supported from upstream anymore and probably contains security issues. + +- `tidy-html5` package is removed. Upstream only provided `(lib)tidy5` during development, and now they went back to `(lib)tidy` to work as a drop-in replacement of the original package that has been unmaintained for years. You can (still) use the `html-tidy` package, which got updated to a stable release from this new upstream. + +- `extraDeviceOptions` argument is removed from `bumblebee` package. Instead there are now two separate arguments: `extraNvidiaDeviceOptions` and `extraNouveauDeviceOptions` for setting extra X11 options for nvidia and nouveau drivers, respectively. + +- The `Ctrl+Alt+Backspace` key combination no longer kills the X server by default. There\'s a new option `services.xserver.enableCtrlAltBackspace` allowing to enable the combination again. + +- `emacsPackagesNg` now contains all packages from the ELPA, MELPA, and MELPA Stable repositories. + +- Data directory for Postfix MTA server is moved from `/var/postfix` to `/var/lib/postfix`. Old configurations are migrated automatically. `service.postfix` module has also received many improvements, such as correct directories\' access rights, new `aliasFiles` and `mapFiles` options and more. + +- Filesystem options should now be configured as a list of strings, not a comma-separated string. The old style will continue to work, but print a warning, until the 16.09 release. An example of the new style: + + ```nix + { + fileSystems."/example" = { + device = "/dev/sdc"; + fsType = "btrfs"; + options = [ "noatime" "compress=lzo" "space_cache" "autodefrag" ]; + }; + } + ``` + +- CUPS, installed by `services.printing` module, now has its data directory in `/var/lib/cups`. Old configurations from `/etc/cups` are moved there automatically, but there might be problems. Also configuration options `services.printing.cupsdConf` and `services.printing.cupsdFilesConf` were removed because they had been allowing one to override configuration variables required for CUPS to work at all on NixOS. For most use cases, `services.printing.extraConf` and new option `services.printing.extraFilesConf` should be enough; if you encounter a situation when they are not, please file a bug. + + There are also Gutenprint improvements; in particular, a new option `services.printing.gutenprint` is added to enable automatic updating of Gutenprint PPMs; it\'s greatly recommended to enable it instead of adding `gutenprint` to the `drivers` list. + +- `services.xserver.vaapiDrivers` has been removed. Use `hardware.opengl.extraPackages{,32}` instead. You can also specify VDPAU drivers there. + +- `programs.ibus` moved to `i18n.inputMethod.ibus`. The option `programs.ibus.plugins` changed to `i18n.inputMethod.ibus.engines` and the option to enable ibus changed from `programs.ibus.enable` to `i18n.inputMethod.enabled`. `i18n.inputMethod.enabled` should be set to the used input method name, `"ibus"` for ibus. An example of the new style: + + ```nix + { + i18n.inputMethod.enabled = "ibus"; + i18n.inputMethod.ibus.engines = with pkgs.ibus-engines; [ anthy mozc ]; + } + ``` + + That is equivalent to the old version: + + ```nix + { + programs.ibus.enable = true; + programs.ibus.plugins = with pkgs; [ ibus-anthy mozc ]; + } + ``` + +- `services.udev.extraRules` option now writes rules to `99-local.rules` instead of `10-local.rules`. This makes all the user rules apply after others, so their results wouldn\'t be overriden by anything else. + +- Large parts of the `services.gitlab` module has been been rewritten. There are new configuration options available. The `stateDir` option was renamned to `statePath` and the `satellitesDir` option was removed. Please review the currently available options. + +- The option `services.nsd.zones..data` no longer interpret the dollar sign (\$) as a shell variable, as such it should not be escaped anymore. Thus the following zone data: + + ```dns-zone + $ORIGIN example.com. + $TTL 1800 + @ IN SOA ns1.vpn.nbp.name. admin.example.com. ( + + ``` + + Should modified to look like the actual file expected by nsd: + + ```dns-zone + $ORIGIN example.com. + $TTL 1800 + @ IN SOA ns1.vpn.nbp.name. admin.example.com. ( + + ``` + +- `service.syncthing.dataDir` options now has to point to exact folder where syncthing is writing to. Example configuration should look something like: + + ```nix + { + services.syncthing = { + enable = true; + dataDir = "/home/somebody/.syncthing"; + user = "somebody"; + }; + } + ``` + +- `networking.firewall.allowPing` is now enabled by default. Users are encouraged to configure an appropriate rate limit for their machines using the Kernel interface at `/proc/sys/net/ipv4/icmp_ratelimit` and `/proc/sys/net/ipv6/icmp/ratelimit` or using the firewall itself, i.e. by setting the NixOS option `networking.firewall.pingLimit`. + +- Systems with some broadcom cards used to result into a generated config that is no longer accepted. If you get errors like + + ```ShellSession + error: path ‘/nix/store/*-broadcom-sta-*’ does not exist and cannot be created + ``` + + you should either re-run `nixos-generate-config` or manually replace `"${config.boot.kernelPackages.broadcom_sta}"` by `config.boot.kernelPackages.broadcom_sta` in your `/etc/nixos/hardware-configuration.nix`. More discussion is on [ the github issue](https://github.com/NixOS/nixpkgs/pull/12595). + +- The `services.xserver.startGnuPGAgent` option has been removed. GnuPG 2.1.x changed the way the gpg-agent works, and that new approach no longer requires (or even supports) the \"start everything as a child of the agent\" scheme we\'ve implemented in NixOS for older versions. To configure the gpg-agent for your X session, add the following code to `~/.bashrc` or some file that's sourced when your shell is started: + + ```shell + GPG_TTY=$(tty) + export GPG_TTY + ``` + + If you want to use gpg-agent for SSH, too, add the following to your session initialization (e.g. `displayManager.sessionCommands`) + + ```shell + gpg-connect-agent /bye + unset SSH_AGENT_PID + export SSH_AUTH_SOCK="''${HOME}/.gnupg/S.gpg-agent.ssh" + ``` + + and make sure that + + ```conf + enable-ssh-support + ``` + + is included in your `~/.gnupg/gpg-agent.conf`. You will need to use `ssh-add` to re-add your ssh keys. If gpg's automatic transformation of the private keys to the new format fails, you will need to re-import your private keyring as well: + + ```ShellSession + gpg --import ~/.gnupg/secring.gpg + ``` + + The `gpg-agent(1)` man page has more details about this subject, i.e. in the \"EXAMPLES\" section. + +Other notable improvements: + +- `ejabberd` module is brought back and now works on NixOS. + +- Input method support was improved. New NixOS modules (fcitx, nabi and uim), fcitx engines (chewing, hangul, m17n, mozc and table-other) and ibus engines (hangul and m17n) have been added. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1603.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1603.xml deleted file mode 100644 index 6d4b28825f..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1603.xml +++ /dev/null @@ -1,671 +0,0 @@ -
- Release 16.03 (“Emu”, 2016/03/31) - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - - - Systemd 229, bringing - numerous - improvements over 217. - - - - - Linux 4.4 (was 3.18). - - - - - GCC 5.3 (was 4.9). Note that GCC 5 - changes - the C++ ABI in an incompatible way; this may cause problems if you - try to link objects compiled with different versions of GCC. - - - - - Glibc 2.23 (was 2.21). - - - - - Binutils 2.26 (was 2.23.1). See #909 - - - - - Improved support for ensuring - bitwise - reproducible builds. For example, stdenv now sets - the environment variable - SOURCE_DATE_EPOCH - to a deterministic value, and Nix has - gained - an option to repeat a build a number of times to test determinism. - An ongoing project, the goal of exact reproducibility is to allow binaries - to be verified independently (e.g., a user might only trust binaries that - appear in three independent binary caches). - - - - - Perl 5.22. - - - - - - The following new services were added since the last release: - - - - services/monitoring/longview.nix - - - - - hardware/video/webcam/facetimehd.nix - - - - - i18n/input-method/default.nix - - - - - i18n/input-method/fcitx.nix - - - - - i18n/input-method/ibus.nix - - - - - i18n/input-method/nabi.nix - - - - - i18n/input-method/uim.nix - - - - - programs/fish.nix - - - - - security/acme.nix - - - - - security/audit.nix - - - - - security/oath.nix - - - - - services/hardware/irqbalance.nix - - - - - services/mail/dspam.nix - - - - - services/mail/opendkim.nix - - - - - services/mail/postsrsd.nix - - - - - services/mail/rspamd.nix - - - - - services/mail/rmilter.nix - - - - - services/misc/autofs.nix - - - - - services/misc/bepasty.nix - - - - - services/misc/calibre-server.nix - - - - - services/misc/cfdyndns.nix - - - - - services/misc/gammu-smsd.nix - - - - - services/misc/mathics.nix - - - - - services/misc/matrix-synapse.nix - - - - - services/misc/octoprint.nix - - - - - services/monitoring/hdaps.nix - - - - - services/monitoring/heapster.nix - - - - - services/monitoring/longview.nix - - - - - services/network-filesystems/netatalk.nix - - - - - services/network-filesystems/xtreemfs.nix - - - - - services/networking/autossh.nix - - - - - services/networking/dnschain.nix - - - - - services/networking/gale.nix - - - - - services/networking/miniupnpd.nix - - - - - services/networking/namecoind.nix - - - - - services/networking/ostinato.nix - - - - - services/networking/pdnsd.nix - - - - - services/networking/shairport-sync.nix - - - - - services/networking/supplicant.nix - - - - - services/search/kibana.nix - - - - - services/security/haka.nix - - - - - services/security/physlock.nix - - - - - services/web-apps/pump.io.nix - - - - - services/x11/hardware/libinput.nix - - - - - services/x11/window-managers/windowlab.nix - - - - - system/boot/initrd-network.nix - - - - - system/boot/initrd-ssh.nix - - - - - system/boot/loader/loader.nix - - - - - system/boot/networkd.nix - - - - - system/boot/resolved.nix - - - - - virtualisation/lxd.nix - - - - - virtualisation/rkt.nix - - - - - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - - We no longer produce graphical ISO images and VirtualBox images for - i686-linux. A minimal ISO image is still provided. - - - - - Firefox and similar browsers are now wrapped by - default. The package and attribute names are plain - firefox or midori, etc. - Backward-compatibility attributes were set up, but note that - nix-env -u will not update your - current firefox-with-plugins; you have to uninstall it - and install firefox instead. - - - - - wmiiSnap has been replaced with - wmii_hg, but - services.xserver.windowManager.wmii.enable has been - updated respectively so this only affects you if you have explicitly - installed wmiiSnap. - - - - - jobs NixOS option has been removed. It served as - compatibility layer between Upstart jobs and SystemD services. All services - have been rewritten to use systemd.services - - - - - wmiimenu is removed, as it has been removed by the - developers upstream. Use wimenu from the - wmii-hg package. - - - - - Gitit is no longer automatically added to the module list in NixOS and as - such there will not be any manual entries for it. You will need to add an - import statement to your NixOS configuration in order to use it, e.g. - ]; -} -]]> - will include the Gitit service configuration options. - - - - - nginx does not accept flags for enabling and disabling - modules anymore. Instead it accepts modules argument, - which is a list of modules to be built in. All modules now reside in - nginxModules set. Example configuration: - - - - - - s3sync is removed, as it hasn't been developed by - upstream for 4 years and only runs with ruby 1.8. For an actively-developer - alternative look at tarsnap and others. - - - - - ruby_1_8 has been removed as it's not supported from - upstream anymore and probably contains security issues. - - - - - tidy-html5 package is removed. Upstream only provided - (lib)tidy5 during development, and now they went back to - (lib)tidy to work as a drop-in replacement of the - original package that has been unmaintained for years. You can (still) use - the html-tidy package, which got updated to a stable - release from this new upstream. - - - - - extraDeviceOptions argument is removed from - bumblebee package. Instead there are now two separate - arguments: extraNvidiaDeviceOptions and - extraNouveauDeviceOptions for setting extra X11 options - for nvidia and nouveau drivers, respectively. - - - - - The Ctrl+Alt+Backspace key combination no longer kills - the X server by default. There's a new option - allowing to enable - the combination again. - - - - - emacsPackagesNg now contains all packages from the ELPA, - MELPA, and MELPA Stable repositories. - - - - - Data directory for Postfix MTA server is moved from - /var/postfix to /var/lib/postfix. - Old configurations are migrated automatically. - service.postfix module has also received many - improvements, such as correct directories' access rights, new - aliasFiles and mapFiles options and - more. - - - - - Filesystem options should now be configured as a list of strings, not a - comma-separated string. The old style will continue to work, but print a - warning, until the 16.09 release. An example of the new style: - -fileSystems."/example" = { - device = "/dev/sdc"; - fsType = "btrfs"; - options = [ "noatime" "compress=lzo" "space_cache" "autodefrag" ]; -}; - - - - - - CUPS, installed by services.printing module, now has its - data directory in /var/lib/cups. Old configurations - from /etc/cups are moved there automatically, but - there might be problems. Also configuration options - services.printing.cupsdConf and - services.printing.cupsdFilesConf were removed because - they had been allowing one to override configuration variables required for - CUPS to work at all on NixOS. For most use cases, - services.printing.extraConf and new option - services.printing.extraFilesConf should be enough; if - you encounter a situation when they are not, please file a bug. - - - There are also Gutenprint improvements; in particular, a new option - services.printing.gutenprint is added to enable - automatic updating of Gutenprint PPMs; it's greatly recommended to enable - it instead of adding gutenprint to the - drivers list. - - - - - services.xserver.vaapiDrivers has been removed. Use - hardware.opengl.extraPackages{,32} instead. You can also - specify VDPAU drivers there. - - - - - programs.ibus moved to - i18n.inputMethod.ibus. The option - programs.ibus.plugins changed to - i18n.inputMethod.ibus.engines and the option to enable - ibus changed from programs.ibus.enable to - i18n.inputMethod.enabled. - i18n.inputMethod.enabled should be set to the used input - method name, "ibus" for ibus. An example of the new - style: - -i18n.inputMethod.enabled = "ibus"; -i18n.inputMethod.ibus.engines = with pkgs.ibus-engines; [ anthy mozc ]; - - That is equivalent to the old version: - -programs.ibus.enable = true; -programs.ibus.plugins = with pkgs; [ ibus-anthy mozc ]; - - - - - - services.udev.extraRules option now writes rules to - 99-local.rules instead of - 10-local.rules. This makes all the user rules apply - after others, so their results wouldn't be overriden by anything else. - - - - - Large parts of the services.gitlab module has been been - rewritten. There are new configuration options available. The - stateDir option was renamned to - statePath and the satellitesDir - option was removed. Please review the currently available options. - - - - - The option no longer - interpret the dollar sign ($) as a shell variable, as such it should not be - escaped anymore. Thus the following zone data: - - -\$ORIGIN example.com. -\$TTL 1800 -@ IN SOA ns1.vpn.nbp.name. admin.example.com. ( - - - Should modified to look like the actual file expected by nsd: - - -$ORIGIN example.com. -$TTL 1800 -@ IN SOA ns1.vpn.nbp.name. admin.example.com. ( - - - - - service.syncthing.dataDir options now has to point to - exact folder where syncthing is writing to. Example configuration should - look something like: - - -services.syncthing = { - enable = true; - dataDir = "/home/somebody/.syncthing"; - user = "somebody"; -}; - - - - - networking.firewall.allowPing is now enabled by default. - Users are encouraged to configure an appropriate rate limit for their - machines using the Kernel interface at - /proc/sys/net/ipv4/icmp_ratelimit and - /proc/sys/net/ipv6/icmp/ratelimit or using the - firewall itself, i.e. by setting the NixOS option - networking.firewall.pingLimit. - - - - - Systems with some broadcom cards used to result into a generated config - that is no longer accepted. If you get errors like -error: path ‘/nix/store/*-broadcom-sta-*’ does not exist and cannot be created - you should either re-run nixos-generate-config or - manually replace - "${config.boot.kernelPackages.broadcom_sta}" by - config.boot.kernelPackages.broadcom_sta in your - /etc/nixos/hardware-configuration.nix. More discussion - is on the - github issue. - - - - - The services.xserver.startGnuPGAgent option has been - removed. GnuPG 2.1.x changed the way the gpg-agent works, and that new - approach no longer requires (or even supports) the "start everything as a - child of the agent" scheme we've implemented in NixOS for older versions. - To configure the gpg-agent for your X session, add the following code to - ~/.bashrc or some file that’s sourced when your - shell is started: - -GPG_TTY=$(tty) -export GPG_TTY - - If you want to use gpg-agent for SSH, too, add the following to your - session initialization (e.g. - displayManager.sessionCommands) - -gpg-connect-agent /bye -unset SSH_AGENT_PID -export SSH_AUTH_SOCK="''${HOME}/.gnupg/S.gpg-agent.ssh" - - and make sure that - -enable-ssh-support - - is included in your ~/.gnupg/gpg-agent.conf. You will - need to use ssh-add to re-add your ssh keys. If gpg’s - automatic transformation of the private keys to the new format fails, you - will need to re-import your private keyring as well: - -gpg --import ~/.gnupg/secring.gpg - - The gpg-agent(1) man page has more details about this - subject, i.e. in the "EXAMPLES" section. - - - - - - Other notable improvements: - - - - - ejabberd module is brought back and now works on NixOS. - - - - - Input method support was improved. New NixOS modules (fcitx, nabi and - uim), fcitx engines (chewing, hangul, m17n, mozc and table-other) and ibus - engines (hangul and m17n) have been added. - - - - -
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1609.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1609.section.md new file mode 100644 index 0000000000..075f0cf52c --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1609.section.md @@ -0,0 +1,73 @@ +# Release 16.09 ("Flounder", 2016/09/30) {#sec-release-16.09} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- Many NixOS configurations and Nix packages now use significantly less disk space, thanks to the [extensive work on closure size reduction](https://github.com/NixOS/nixpkgs/issues/7117). For example, the closure size of a minimal NixOS container went down from \~424 MiB in 16.03 to \~212 MiB in 16.09, while the closure size of Firefox went from \~651 MiB to \~259 MiB. + +- To improve security, packages are now [built using various hardening features](https://github.com/NixOS/nixpkgs/pull/12895). See the Nixpkgs manual for more information. + +- Support for PXE netboot. See [](#sec-booting-from-pxe) for documentation. + +- X.org server 1.18. If you use the `ati_unfree` driver, 1.17 is still used due to an ABI incompatibility. + +- This release is based on Glibc 2.24, GCC 5.4.0 and systemd 231. The default Linux kernel remains 4.4. + +The following new services were added since the last release: + +- `(this will get automatically generated at release time)` + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- A large number of packages have been converted to use the multiple outputs feature of Nix to greatly reduce the amount of required disk space, as mentioned above. This may require changes to any custom packages to make them build again; see the relevant chapter in the Nixpkgs manual for more information. (Additional caveat to packagers: some packaging conventions related to multiple-output packages [were changed](https://github.com/NixOS/nixpkgs/pull/14766) late (August 2016) in the release cycle and differ from the initial introduction of multiple outputs.) + +- Previous versions of Nixpkgs had support for all versions of the LTS Haskell package set. That support has been dropped. The previously provided `haskell.packages.lts-x_y` package sets still exist in name to aviod breaking user code, but these package sets don\'t actually contain the versions mandated by the corresponding LTS release. Instead, our package set it loosely based on the latest available LTS release, i.e. LTS 7.x at the time of this writing. New releases of NixOS and Nixpkgs will drop those old names entirely. [The motivation for this change](https://nixos.org/nix-dev/2016-June/020585.html) has been discussed at length on the `nix-dev` mailing list and in [Github issue \#14897](https://github.com/NixOS/nixpkgs/issues/14897). Development strategies for Haskell hackers who want to rely on Nix and NixOS have been described in [another nix-dev article](https://nixos.org/nix-dev/2016-June/020642.html). + +- Shell aliases for systemd sub-commands [were dropped](https://github.com/NixOS/nixpkgs/pull/15598): `start`, `stop`, `restart`, `status`. + +- Redis now binds to 127.0.0.1 only instead of listening to all network interfaces. This is the default behavior of Redis 3.2 + +- `/var/empty` is now immutable. Activation script runs `chattr +i` to forbid any modifications inside the folder. See [ the pull request](https://github.com/NixOS/nixpkgs/pull/18365) for what bugs this caused. + +- Gitlab\'s maintainance script `gitlab-runner` was removed and split up into the more clearer `gitlab-run` and `gitlab-rake` scripts, because `gitlab-runner` is a component of Gitlab CI. + +- `services.xserver.libinput.accelProfile` default changed from `flat` to `adaptive`, as per [ official documentation](https://wayland.freedesktop.org/libinput/doc/latest/group__config.html#gad63796972347f318b180e322e35cee79). + +- `fonts.fontconfig.ultimate.rendering` was removed because our presets were obsolete for some time. New presets are hardcoded into FreeType; you can select a preset via `fonts.fontconfig.ultimate.preset`. You can customize those presets via ordinary environment variables, using `environment.variables`. + +- The `audit` service is no longer enabled by default. Use `security.audit.enable = true` to explicitly enable it. + +- `pkgs.linuxPackages.virtualbox` now contains only the kernel modules instead of the VirtualBox user space binaries. If you want to reference the user space binaries, you have to use the new `pkgs.virtualbox` instead. + +- `goPackages` was replaced with separated Go applications in appropriate `nixpkgs` categories. Each Go package uses its own dependency set. There\'s also a new `go2nix` tool introduced to generate a Go package definition from its Go source automatically. + +- `services.mongodb.extraConfig` configuration format was changed to YAML. + +- PHP has been upgraded to 7.0 + +Other notable improvements: + +- Revamped grsecurity/PaX support. There is now only a single general-purpose distribution kernel and the configuration interface has been streamlined. Desktop users should be able to simply set + + ```nix + { + security.grsecurity.enable = true; + } + ``` + + to get a reasonably secure system without having to sacrifice too much functionality. + +- Special filesystems, like `/proc`, `/run` and others, now have the same mount options as recommended by systemd and are unified across different places in NixOS. Mount options are updated during `nixos-rebuild switch` if possible. One benefit from this is improved security --- most such filesystems are now mounted with `noexec`, `nodev` and/or `nosuid` options. + +- The reverse path filter was interfering with DHCPv4 server operation in the past. An exception for DHCPv4 and a new option to log packets that were dropped due to the reverse path filter was added (`networking.firewall.logReversePathDrops`) for easier debugging. + +- Containers configuration within `containers..config` is [now properly typed and checked](https://github.com/NixOS/nixpkgs/pull/17365). In particular, partial configurations are merged correctly. + +- The directory container setuid wrapper programs, `/var/setuid-wrappers`, [is now updated atomically to prevent failures if the switch to a new configuration is interrupted.](https://github.com/NixOS/nixpkgs/pull/18124) + +- `services.xserver.startGnuPGAgent` has been removed due to GnuPG 2.1.x bump. See [ how to achieve similar behavior](https://github.com/NixOS/nixpkgs/commit/5391882ebd781149e213e8817fba6ac3c503740c). You might need to `pkill gpg-agent` after the upgrade to prevent a stale agent being in the way. + +- [ Declarative users could share the uid due to the bug in the script handling conflict resolution. ](https://github.com/NixOS/nixpkgs/commit/e561edc322d275c3687fec431935095cfc717147) + +- Gummi boot has been replaced using systemd-boot. + +- Hydra package and NixOS module were added for convenience. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1609.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1609.xml deleted file mode 100644 index 4a2343edc9..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1609.xml +++ /dev/null @@ -1,277 +0,0 @@ -
- Release 16.09 (“Flounder”, 2016/09/30) - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - - - Many NixOS configurations and Nix packages now use significantly less disk - space, thanks to the - extensive - work on closure size reduction. For example, the closure size of a - minimal NixOS container went down from ~424 MiB in 16.03 to ~212 MiB in - 16.09, while the closure size of Firefox went from ~651 MiB to ~259 MiB. - - - - - To improve security, packages are now - built - using various hardening features. See the Nixpkgs manual for more - information. - - - - - Support for PXE netboot. See - for documentation. - - - - - X.org server 1.18. If you use the ati_unfree driver, - 1.17 is still used due to an ABI incompatibility. - - - - - This release is based on Glibc 2.24, GCC 5.4.0 and systemd 231. The default - Linux kernel remains 4.4. - - - - - - The following new services were added since the last release: - - - - - - (this will get automatically generated at release time) - - - - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - - A large number of packages have been converted to use the multiple outputs - feature of Nix to greatly reduce the amount of required disk space, as - mentioned above. This may require changes to any custom packages to make - them build again; see the relevant chapter in the Nixpkgs manual for more - information. (Additional caveat to packagers: some packaging conventions - related to multiple-output packages - were - changed late (August 2016) in the release cycle and differ from the - initial introduction of multiple outputs.) - - - - - Previous versions of Nixpkgs had support for all versions of the LTS - Haskell package set. That support has been dropped. The previously provided - haskell.packages.lts-x_y package sets still exist in - name to aviod breaking user code, but these package sets don't actually - contain the versions mandated by the corresponding LTS release. Instead, - our package set it loosely based on the latest available LTS release, i.e. - LTS 7.x at the time of this writing. New releases of NixOS and Nixpkgs will - drop those old names entirely. - The - motivation for this change has been discussed at length on the - nix-dev mailing list and in - Github - issue #14897. Development strategies for Haskell hackers who want to - rely on Nix and NixOS have been described in - another - nix-dev article. - - - - - Shell aliases for systemd sub-commands - were - dropped: start, stop, - restart, status. - - - - - Redis now binds to 127.0.0.1 only instead of listening to all network - interfaces. This is the default behavior of Redis 3.2 - - - - - /var/empty is now immutable. Activation script runs - chattr +i to forbid any modifications inside the folder. - See the - pull request for what bugs this caused. - - - - - Gitlab's maintainance script gitlab-runner was removed - and split up into the more clearer gitlab-run and - gitlab-rake scripts, because - gitlab-runner is a component of Gitlab CI. - - - - - services.xserver.libinput.accelProfile default changed - from flat to adaptive, as per - - official documentation. - - - - - fonts.fontconfig.ultimate.rendering was removed because - our presets were obsolete for some time. New presets are hardcoded into - FreeType; you can select a preset via - fonts.fontconfig.ultimate.preset. You can customize - those presets via ordinary environment variables, using - environment.variables. - - - - - The audit service is no longer enabled by default. Use - security.audit.enable = true to explicitly enable it. - - - - - pkgs.linuxPackages.virtualbox now contains only the - kernel modules instead of the VirtualBox user space binaries. If you want - to reference the user space binaries, you have to use the new - pkgs.virtualbox instead. - - - - - goPackages was replaced with separated Go applications - in appropriate nixpkgs categories. Each Go package uses - its own dependency set. There's also a new go2nix tool - introduced to generate a Go package definition from its Go source - automatically. - - - - - services.mongodb.extraConfig configuration format was - changed to YAML. - - - - - PHP has been upgraded to 7.0 - - - - - - Other notable improvements: - - - - - - Revamped grsecurity/PaX support. There is now only a single general-purpose - distribution kernel and the configuration interface has been streamlined. - Desktop users should be able to simply set -security.grsecurity.enable = true - to get a reasonably secure system without having to sacrifice too much - functionality. - - - - - Special filesystems, like /proc, /run - and others, now have the same mount options as recommended by systemd and - are unified across different places in NixOS. Mount options are updated - during nixos-rebuild switch if possible. One benefit - from this is improved security — most such filesystems are now mounted - with noexec, nodev and/or - nosuid options. - - - - - The reverse path filter was interfering with DHCPv4 server operation in the - past. An exception for DHCPv4 and a new option to log packets that were - dropped due to the reverse path filter was added - (networking.firewall.logReversePathDrops) for easier - debugging. - - - - - Containers configuration within - containers.<name>.config is - now - properly typed and checked. In particular, partial configurations - are merged correctly. - - - - - The directory container setuid wrapper programs, - /var/setuid-wrappers, - is now - updated atomically to prevent failures if the switch to a new configuration - is interrupted. - - - - - services.xserver.startGnuPGAgent has been removed due to - GnuPG 2.1.x bump. See - - how to achieve similar behavior. You might need to pkill - gpg-agent after the upgrade to prevent a stale agent being in the - way. - - - - - - Declarative users could share the uid due to the bug in the script handling - conflict resolution. - - - - - Gummi boot has been replaced using systemd-boot. - - - - - Hydra package and NixOS module were added for convenience. - - - -
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1703.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1703.section.md new file mode 100644 index 0000000000..7f424f2a6c --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1703.section.md @@ -0,0 +1,303 @@ +# Release 17.03 ("Gorilla", 2017/03/31) {#sec-release-17.03} + +## Highlights {#sec-release-17.03-highlights} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- Nixpkgs is now extensible through overlays. See the [Nixpkgs manual](https://nixos.org/nixpkgs/manual/#sec-overlays-install) for more information. + +- This release is based on Glibc 2.25, GCC 5.4.0 and systemd 232. The default Linux kernel is 4.9 and Nix is at 1.11.8. + +- The default desktop environment now is KDE\'s Plasma 5. KDE 4 has been removed + +- The setuid wrapper functionality now supports setting capabilities. + +- X.org server uses branch 1.19. Due to ABI incompatibilities, `ati_unfree` keeps forcing 1.17 and `amdgpu-pro` starts forcing 1.18. + +- Cross compilation has been rewritten. See the nixpkgs manual for details. The most obvious breaking change is that in derivations there is no `.nativeDrv` nor `.crossDrv` are now cross by default, not native. + +- The `overridePackages` function has been rewritten to be replaced by [ overlays](https://nixos.org/nixpkgs/manual/#sec-overlays-install) + +- Packages in nixpkgs can be marked as insecure through listed vulnerabilities. See the [Nixpkgs manual](https://nixos.org/nixpkgs/manual/#sec-allow-insecure) for more information. + +- PHP now defaults to PHP 7.1 + +## New Services {#sec-release-17.03-new-services} + +The following new services were added since the last release: + +- `hardware/ckb.nix` + +- `hardware/mcelog.nix` + +- `hardware/usb-wwan.nix` + +- `hardware/video/capture/mwprocapture.nix` + +- `programs/adb.nix` + +- `programs/chromium.nix` + +- `programs/gphoto2.nix` + +- `programs/java.nix` + +- `programs/mtr.nix` + +- `programs/oblogout.nix` + +- `programs/vim.nix` + +- `programs/wireshark.nix` + +- `security/dhparams.nix` + +- `services/audio/ympd.nix` + +- `services/computing/boinc/client.nix` + +- `services/continuous-integration/buildbot/master.nix` + +- `services/continuous-integration/buildbot/worker.nix` + +- `services/continuous-integration/gitlab-runner.nix` + +- `services/databases/riak-cs.nix` + +- `services/databases/stanchion.nix` + +- `services/desktops/gnome3/gnome-terminal-server.nix` + +- `services/editors/infinoted.nix` + +- `services/hardware/illum.nix` + +- `services/hardware/trezord.nix` + +- `services/logging/journalbeat.nix` + +- `services/mail/offlineimap.nix` + +- `services/mail/postgrey.nix` + +- `services/misc/couchpotato.nix` + +- `services/misc/docker-registry.nix` + +- `services/misc/errbot.nix` + +- `services/misc/geoip-updater.nix` + +- `services/misc/gogs.nix` + +- `services/misc/leaps.nix` + +- `services/misc/nix-optimise.nix` + +- `services/misc/ssm-agent.nix` + +- `services/misc/sssd.nix` + +- `services/monitoring/arbtt.nix` + +- `services/monitoring/netdata.nix` + +- `services/monitoring/prometheus/default.nix` + +- `services/monitoring/prometheus/alertmanager.nix` + +- `services/monitoring/prometheus/blackbox-exporter.nix` + +- `services/monitoring/prometheus/json-exporter.nix` + +- `services/monitoring/prometheus/nginx-exporter.nix` + +- `services/monitoring/prometheus/node-exporter.nix` + +- `services/monitoring/prometheus/snmp-exporter.nix` + +- `services/monitoring/prometheus/unifi-exporter.nix` + +- `services/monitoring/prometheus/varnish-exporter.nix` + +- `services/monitoring/sysstat.nix` + +- `services/monitoring/telegraf.nix` + +- `services/monitoring/vnstat.nix` + +- `services/network-filesystems/cachefilesd.nix` + +- `services/network-filesystems/glusterfs.nix` + +- `services/network-filesystems/ipfs.nix` + +- `services/networking/dante.nix` + +- `services/networking/dnscrypt-wrapper.nix` + +- `services/networking/fakeroute.nix` + +- `services/networking/flannel.nix` + +- `services/networking/htpdate.nix` + +- `services/networking/miredo.nix` + +- `services/networking/nftables.nix` + +- `services/networking/powerdns.nix` + +- `services/networking/pdns-recursor.nix` + +- `services/networking/quagga.nix` + +- `services/networking/redsocks.nix` + +- `services/networking/wireguard.nix` + +- `services/system/cgmanager.nix` + +- `services/torrent/opentracker.nix` + +- `services/web-apps/atlassian/confluence.nix` + +- `services/web-apps/atlassian/crowd.nix` + +- `services/web-apps/atlassian/jira.nix` + +- `services/web-apps/frab.nix` + +- `services/web-apps/nixbot.nix` + +- `services/web-apps/selfoss.nix` + +- `services/web-apps/quassel-webserver.nix` + +- `services/x11/unclutter-xfixes.nix` + +- `services/x11/urxvtd.nix` + +- `system/boot/systemd-nspawn.nix` + +- `virtualisation/ecs-agent.nix` + +- `virtualisation/lxcfs.nix` + +- `virtualisation/openstack/keystone.nix` + +- `virtualisation/openstack/glance.nix` + +## Backward Incompatibilities {#sec-release-17.03-incompatibilities} + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- Derivations have no `.nativeDrv` nor `.crossDrv` and are now cross by default, not native. + +- `stdenv.overrides` is now expected to take `self` and `super` arguments. See `lib.trivial.extends` for what those parameters represent. + +- `ansible` now defaults to ansible version 2 as version 1 has been removed due to a serious [ vulnerability](https://www.computest.nl/advisories/CT-2017-0109_Ansible.txt) unpatched by upstream. + +- `gnome` alias has been removed along with `gtk`, `gtkmm` and several others. Now you need to use versioned attributes, like `gnome3`. + +- The attribute name of the Radicale daemon has been changed from `pythonPackages.radicale` to `radicale`. + +- The `stripHash` bash function in `stdenv` changed according to its documentation; it now outputs the stripped name to `stdout` instead of putting it in the variable `strippedName`. + +- PHP now scans for extra configuration .ini files in /etc/php.d instead of /etc. This prevents accidentally loading non-PHP .ini files that may be in /etc. + +- Two lone top-level dict dbs moved into `dictdDBs`. This affects: `dictdWordnet` which is now at `dictdDBs.wordnet` and `dictdWiktionary` which is now at `dictdDBs.wiktionary` + +- Parsoid service now uses YAML configuration format. `service.parsoid.interwikis` is now called `service.parsoid.wikis` and is a list of either API URLs or attribute sets as specified in parsoid\'s documentation. + +- `Ntpd` was replaced by `systemd-timesyncd` as the default service to synchronize system time with a remote NTP server. The old behavior can be restored by setting `services.ntp.enable` to `true`. Upstream time servers for all NTP implementations are now configured using `networking.timeServers`. + +- `service.nylon` is now declared using named instances. As an example: + + ```nix + { + services.nylon = { + enable = true; + acceptInterface = "br0"; + bindInterface = "tun1"; + port = 5912; + }; + } + ``` + + should be replaced with: + + ```nix + { + services.nylon.myvpn = { + enable = true; + acceptInterface = "br0"; + bindInterface = "tun1"; + port = 5912; + }; + } + ``` + + this enables you to declare a SOCKS proxy for each uplink. + +- `overridePackages` function no longer exists. It is replaced by [ overlays](https://nixos.org/nixpkgs/manual/#sec-overlays-install). For example, the following code: + + ```nix + let + pkgs = import {}; + in + pkgs.overridePackages (self: super: ...) + ``` + + should be replaced by: + + ```nix + let + pkgs = import {}; + in + import pkgs.path { overlays = [(self: super: ...)]; } + ``` + +- Autoloading connection tracking helpers is now disabled by default. This default was also changed in the Linux kernel and is considered insecure if not configured properly in your firewall. If you need connection tracking helpers (i.e. for active FTP) please enable `networking.firewall.autoLoadConntrackHelpers` and tune `networking.firewall.connectionTrackingModules` to suit your needs. + +- `local_recipient_maps` is not set to empty value by Postfix service. It\'s an insecure default as stated by Postfix documentation. Those who want to retain this setting need to set it via `services.postfix.extraConfig`. + +- Iputils no longer provide ping6 and traceroute6. The functionality of these tools has been integrated into ping and traceroute respectively. To enforce an address family the new flags `-4` and `-6` have been added. One notable incompatibility is that specifying an interface (for link-local IPv6 for instance) is no longer done with the `-I` flag, but by encoding the interface into the address (`ping fe80::1%eth0`). + +- The socket handling of the `services.rmilter` module has been fixed and refactored. As rmilter doesn\'t support binding to more than one socket, the options `bindUnixSockets` and `bindInetSockets` have been replaced by `services.rmilter.bindSocket.*`. The default is still a unix socket in `/run/rmilter/rmilter.sock`. Refer to the options documentation for more information. + +- The `fetch*` functions no longer support md5, please use sha256 instead. + +- The dnscrypt-proxy module interface has been streamlined around the `extraArgs` option. Where possible, legacy option declarations are mapped to `extraArgs` but will emit warnings. The `resolverList` has been outright removed: to use an unlisted resolver, use the `customResolver` option. + +- torbrowser now stores local state under `~/.local/share/tor-browser` by default. Any browser profile data from the old location, `~/.torbrowser4`, must be migrated manually. + +- The ihaskell, monetdb, offlineimap and sitecopy services have been removed. + +## Other Notable Changes {#sec-release-17.03-notable-changes} + +- Module type system have a new extensible option types feature that allow to extend certain types, such as enum, through multiple option declarations of the same option across multiple modules. + +- `jre` now defaults to GTK UI by default. This improves visual consistency and makes Java follow system font style, improving the situation on HighDPI displays. This has a cost of increased closure size; for server and other headless workloads it\'s recommended to use `jre_headless`. + +- Python 2.6 interpreter and package set have been removed. + +- The Python 2.7 interpreter does not use modules anymore. Instead, all CPython interpreters now include the whole standard library except for \`tkinter\`, which is available in the Python package set. + +- Python 2.7, 3.5 and 3.6 are now built deterministically and 3.4 mostly. Minor modifications had to be made to the interpreters in order to generate deterministic bytecode. This has security implications and is relevant for those using Python in a `nix-shell`. See the Nixpkgs manual for details. + +- The Python package sets now use a fixed-point combinator and the sets are available as attributes of the interpreters. + +- The Python function `buildPythonPackage` has been improved and can be used to build from Setuptools source, Flit source, and precompiled Wheels. + +- When adding new or updating current Python libraries, the expressions should be put in separate files in `pkgs/development/python-modules` and called from `python-packages.nix`. + +- The dnscrypt-proxy service supports synchronizing the list of public resolvers without working DNS resolution. This fixes issues caused by the resolver list becoming outdated. It also improves the viability of DNSCrypt only configurations. + +- Containers using bridged networking no longer lose their connection after changes to the host networking. + +- ZFS supports pool auto scrubbing. + +- The bind DNS utilities (e.g. dig) have been split into their own output and are now also available in `pkgs.dnsutils` and it is no longer necessary to pull in all of `bind` to use them. + +- Per-user configuration was moved from `~/.nixpkgs` to `~/.config/nixpkgs`. The former is still valid for `config.nix` for backwards compatibility. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1703.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1703.xml deleted file mode 100644 index 14b31b232e..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1703.xml +++ /dev/null @@ -1,817 +0,0 @@ -
- Release 17.03 (“Gorilla”, 2017/03/31) - -
- Highlights - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - - - Nixpkgs is now extensible through overlays. See the - Nixpkgs - manual for more information. - - - - - This release is based on Glibc 2.25, GCC 5.4.0 and systemd 232. The - default Linux kernel is 4.9 and Nix is at 1.11.8. - - - - - The default desktop environment now is KDE's Plasma 5. KDE 4 has been - removed - - - - - The setuid wrapper functionality now supports setting capabilities. - - - - - X.org server uses branch 1.19. Due to ABI incompatibilities, - ati_unfree keeps forcing 1.17 and - amdgpu-pro starts forcing 1.18. - - - - - Cross compilation has been rewritten. See the nixpkgs manual for details. - The most obvious breaking change is that in derivations there is no - .nativeDrv nor .crossDrv are now - cross by default, not native. - - - - - The overridePackages function has been rewritten to be - replaced by - - overlays - - - - - Packages in nixpkgs can be marked as insecure through listed - vulnerabilities. See the - Nixpkgs - manual for more information. - - - - - PHP now defaults to PHP 7.1 - - - -
- -
- New Services - - - The following new services were added since the last release: - - - - - - hardware/ckb.nix - - - - - hardware/mcelog.nix - - - - - hardware/usb-wwan.nix - - - - - hardware/video/capture/mwprocapture.nix - - - - - programs/adb.nix - - - - - programs/chromium.nix - - - - - programs/gphoto2.nix - - - - - programs/java.nix - - - - - programs/mtr.nix - - - - - programs/oblogout.nix - - - - - programs/vim.nix - - - - - programs/wireshark.nix - - - - - security/dhparams.nix - - - - - services/audio/ympd.nix - - - - - services/computing/boinc/client.nix - - - - - services/continuous-integration/buildbot/master.nix - - - - - services/continuous-integration/buildbot/worker.nix - - - - - services/continuous-integration/gitlab-runner.nix - - - - - services/databases/riak-cs.nix - - - - - services/databases/stanchion.nix - - - - - services/desktops/gnome3/gnome-terminal-server.nix - - - - - services/editors/infinoted.nix - - - - - services/hardware/illum.nix - - - - - services/hardware/trezord.nix - - - - - services/logging/journalbeat.nix - - - - - services/mail/offlineimap.nix - - - - - services/mail/postgrey.nix - - - - - services/misc/couchpotato.nix - - - - - services/misc/docker-registry.nix - - - - - services/misc/errbot.nix - - - - - services/misc/geoip-updater.nix - - - - - services/misc/gogs.nix - - - - - services/misc/leaps.nix - - - - - services/misc/nix-optimise.nix - - - - - services/misc/ssm-agent.nix - - - - - services/misc/sssd.nix - - - - - services/monitoring/arbtt.nix - - - - - services/monitoring/netdata.nix - - - - - services/monitoring/prometheus/default.nix - - - - - services/monitoring/prometheus/alertmanager.nix - - - - - services/monitoring/prometheus/blackbox-exporter.nix - - - - - services/monitoring/prometheus/json-exporter.nix - - - - - services/monitoring/prometheus/nginx-exporter.nix - - - - - services/monitoring/prometheus/node-exporter.nix - - - - - services/monitoring/prometheus/snmp-exporter.nix - - - - - services/monitoring/prometheus/unifi-exporter.nix - - - - - services/monitoring/prometheus/varnish-exporter.nix - - - - - services/monitoring/sysstat.nix - - - - - services/monitoring/telegraf.nix - - - - - services/monitoring/vnstat.nix - - - - - services/network-filesystems/cachefilesd.nix - - - - - services/network-filesystems/glusterfs.nix - - - - - services/network-filesystems/ipfs.nix - - - - - services/networking/dante.nix - - - - - services/networking/dnscrypt-wrapper.nix - - - - - services/networking/fakeroute.nix - - - - - services/networking/flannel.nix - - - - - services/networking/htpdate.nix - - - - - services/networking/miredo.nix - - - - - services/networking/nftables.nix - - - - - services/networking/powerdns.nix - - - - - services/networking/pdns-recursor.nix - - - - - services/networking/quagga.nix - - - - - services/networking/redsocks.nix - - - - - services/networking/wireguard.nix - - - - - services/system/cgmanager.nix - - - - - services/torrent/opentracker.nix - - - - - services/web-apps/atlassian/confluence.nix - - - - - services/web-apps/atlassian/crowd.nix - - - - - services/web-apps/atlassian/jira.nix - - - - - services/web-apps/frab.nix - - - - - services/web-apps/nixbot.nix - - - - - services/web-apps/selfoss.nix - - - - - services/web-apps/quassel-webserver.nix - - - - - services/x11/unclutter-xfixes.nix - - - - - services/x11/urxvtd.nix - - - - - system/boot/systemd-nspawn.nix - - - - - virtualisation/ecs-agent.nix - - - - - virtualisation/lxcfs.nix - - - - - virtualisation/openstack/keystone.nix - - - - - virtualisation/openstack/glance.nix - - - -
- -
- Backward Incompatibilities - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - - Derivations have no .nativeDrv nor - .crossDrv and are now cross by default, not native. - - - - - stdenv.overrides is now expected to take - self and super arguments. See - lib.trivial.extends for what those parameters - represent. - - - - - ansible now defaults to ansible version 2 as version 1 - has been removed due to a serious - - vulnerability unpatched by upstream. - - - - - gnome alias has been removed along with - gtk, gtkmm and several others. Now - you need to use versioned attributes, like gnome3. - - - - - The attribute name of the Radicale daemon has been changed from - pythonPackages.radicale to radicale. - - - - - The stripHash bash function in - stdenv changed according to its documentation; it now - outputs the stripped name to stdout instead of putting - it in the variable strippedName. - - - - - PHP now scans for extra configuration .ini files in /etc/php.d instead of - /etc. This prevents accidentally loading non-PHP .ini files that may be in - /etc. - - - - - Two lone top-level dict dbs moved into dictdDBs. This - affects: dictdWordnet which is now at - dictdDBs.wordnet and dictdWiktionary - which is now at dictdDBs.wiktionary - - - - - Parsoid service now uses YAML configuration format. - service.parsoid.interwikis is now called - service.parsoid.wikis and is a list of either API URLs - or attribute sets as specified in parsoid's documentation. - - - - - Ntpd was replaced by - systemd-timesyncd as the default service to synchronize - system time with a remote NTP server. The old behavior can be restored by - setting services.ntp.enable to true. - Upstream time servers for all NTP implementations are now configured using - networking.timeServers. - - - - - service.nylon is now declared using named instances. As - an example: - - services.nylon = { - enable = true; - acceptInterface = "br0"; - bindInterface = "tun1"; - port = 5912; - }; - - should be replaced with: - - services.nylon.myvpn = { - enable = true; - acceptInterface = "br0"; - bindInterface = "tun1"; - port = 5912; - }; - - this enables you to declare a SOCKS proxy for each uplink. - - - - - overridePackages function no longer exists. It is - replaced by - - overlays. For example, the following code: - -let - pkgs = import <nixpkgs> {}; -in - pkgs.overridePackages (self: super: ...) - - should be replaced by: - -let - pkgs = import <nixpkgs> {}; -in - import pkgs.path { overlays = [(self: super: ...)]; } - - - - - - Autoloading connection tracking helpers is now disabled by default. This - default was also changed in the Linux kernel and is considered insecure if - not configured properly in your firewall. If you need connection tracking - helpers (i.e. for active FTP) please enable - networking.firewall.autoLoadConntrackHelpers and tune - networking.firewall.connectionTrackingModules to suit - your needs. - - - - - local_recipient_maps is not set to empty value by - Postfix service. It's an insecure default as stated by Postfix - documentation. Those who want to retain this setting need to set it via - services.postfix.extraConfig. - - - - - Iputils no longer provide ping6 and traceroute6. The functionality of - these tools has been integrated into ping and traceroute respectively. To - enforce an address family the new flags -4 and - -6 have been added. One notable incompatibility is that - specifying an interface (for link-local IPv6 for instance) is no longer - done with the -I flag, but by encoding the interface - into the address (ping fe80::1%eth0). - - - - - The socket handling of the services.rmilter module has - been fixed and refactored. As rmilter doesn't support binding to more than - one socket, the options bindUnixSockets and - bindInetSockets have been replaced by - services.rmilter.bindSocket.*. The default is still a - unix socket in /run/rmilter/rmilter.sock. Refer to the - options documentation for more information. - - - - - The fetch* functions no longer support md5, please use - sha256 instead. - - - - - The dnscrypt-proxy module interface has been streamlined around the - option. Where possible, legacy option - declarations are mapped to but will emit - warnings. The has been outright removed: to - use an unlisted resolver, use the option. - - - - - torbrowser now stores local state under - ~/.local/share/tor-browser by default. Any browser - profile data from the old location, ~/.torbrowser4, - must be migrated manually. - - - - - The ihaskell, monetdb, offlineimap and sitecopy services have been - removed. - - - -
- -
- Other Notable Changes - - - - - Module type system have a new extensible option types feature that allow - to extend certain types, such as enum, through multiple option - declarations of the same option across multiple modules. - - - - - jre now defaults to GTK UI by default. This improves - visual consistency and makes Java follow system font style, improving the - situation on HighDPI displays. This has a cost of increased closure size; - for server and other headless workloads it's recommended to use - jre_headless. - - - - - Python 2.6 interpreter and package set have been removed. - - - - - The Python 2.7 interpreter does not use modules anymore. Instead, all - CPython interpreters now include the whole standard library except for - `tkinter`, which is available in the Python package set. - - - - - Python 2.7, 3.5 and 3.6 are now built deterministically and 3.4 mostly. - Minor modifications had to be made to the interpreters in order to - generate deterministic bytecode. This has security implications and is - relevant for those using Python in a nix-shell. See the - Nixpkgs manual for details. - - - - - The Python package sets now use a fixed-point combinator and the sets are - available as attributes of the interpreters. - - - - - The Python function buildPythonPackage has been - improved and can be used to build from Setuptools source, Flit source, and - precompiled Wheels. - - - - - When adding new or updating current Python libraries, the expressions - should be put in separate files in - pkgs/development/python-modules and called from - python-packages.nix. - - - - - The dnscrypt-proxy service supports synchronizing the list of public - resolvers without working DNS resolution. This fixes issues caused by the - resolver list becoming outdated. It also improves the viability of - DNSCrypt only configurations. - - - - - Containers using bridged networking no longer lose their connection after - changes to the host networking. - - - - - ZFS supports pool auto scrubbing. - - - - - The bind DNS utilities (e.g. dig) have been split into their own output - and are now also available in pkgs.dnsutils and it is - no longer necessary to pull in all of bind to use them. - - - - - Per-user configuration was moved from ~/.nixpkgs to - ~/.config/nixpkgs. The former is still valid for - config.nix for backwards compatibility. - - - -
-
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1709.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1709.section.md new file mode 100644 index 0000000000..e5af22721b --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1709.section.md @@ -0,0 +1,316 @@ +# Release 17.09 ("Hummingbird", 2017/09/??) {#sec-release-17.09} + +## Highlights {#sec-release-17.09-highlights} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- The GNOME version is now 3.24. KDE Plasma was upgraded to 5.10, KDE Applications to 17.08.1 and KDE Frameworks to 5.37. + +- The user handling now keeps track of deallocated UIDs/GIDs. When a user or group is revived, this allows it to be allocated the UID/GID it had before. A consequence is that UIDs and GIDs are no longer reused. + +- The module option `services.xserver.xrandrHeads` now causes the first head specified in this list to be set as the primary head. Apart from that, it\'s now possible to also set additional options by using an attribute set, for example: + + ```nix + { services.xserver.xrandrHeads = [ + "HDMI-0" + { + output = "DVI-0"; + primary = true; + monitorConfig = '' + Option "Rotate" "right" + ''; + } + ]; + } + ``` + + This will set the `DVI-0` output to be the primary head, even though `HDMI-0` is the first head in the list. + +- The handling of SSL in the `services.nginx` module has been cleaned up, renaming the misnamed `enableSSL` to `onlySSL` which reflects its original intention. This is not to be used with the already existing `forceSSL` which creates a second non-SSL virtual host redirecting to the SSL virtual host. This by chance had worked earlier due to specific implementation details. In case you had specified both please remove the `enableSSL` option to keep the previous behaviour. + + Another `addSSL` option has been introduced to configure both a non-SSL virtual host and an SSL virtual host with the same configuration. + + Options to configure `resolver` options and `upstream` blocks have been introduced. See their information for further details. + + The `port` option has been replaced by a more generic `listen` option which makes it possible to specify multiple addresses, ports and SSL configs dependant on the new SSL handling mentioned above. + +## New Services {#sec-release-17.09-new-services} + +The following new services were added since the last release: + +- `config/fonts/fontconfig-penultimate.nix` + +- `config/fonts/fontconfig-ultimate.nix` + +- `config/terminfo.nix` + +- `hardware/sensor/iio.nix` + +- `hardware/nitrokey.nix` + +- `hardware/raid/hpsa.nix` + +- `programs/browserpass.nix` + +- `programs/gnupg.nix` + +- `programs/qt5ct.nix` + +- `programs/slock.nix` + +- `programs/thefuck.nix` + +- `security/auditd.nix` + +- `security/lock-kernel-modules.nix` + +- `service-managers/docker.nix` + +- `service-managers/trivial.nix` + +- `services/admin/salt/master.nix` + +- `services/admin/salt/minion.nix` + +- `services/audio/slimserver.nix` + +- `services/cluster/kubernetes/default.nix` + +- `services/cluster/kubernetes/dns.nix` + +- `services/cluster/kubernetes/dashboard.nix` + +- `services/continuous-integration/hail.nix` + +- `services/databases/clickhouse.nix` + +- `services/databases/postage.nix` + +- `services/desktops/gnome3/gnome-disks.nix` + +- `services/desktops/gnome3/gpaste.nix` + +- `services/logging/SystemdJournal2Gelf.nix` + +- `services/logging/heartbeat.nix` + +- `services/logging/journalwatch.nix` + +- `services/logging/syslogd.nix` + +- `services/mail/mailhog.nix` + +- `services/mail/nullmailer.nix` + +- `services/misc/airsonic.nix` + +- `services/misc/autorandr.nix` + +- `services/misc/exhibitor.nix` + +- `services/misc/fstrim.nix` + +- `services/misc/gollum.nix` + +- `services/misc/irkerd.nix` + +- `services/misc/jackett.nix` + +- `services/misc/radarr.nix` + +- `services/misc/snapper.nix` + +- `services/monitoring/osquery.nix` + +- `services/monitoring/prometheus/collectd-exporter.nix` + +- `services/monitoring/prometheus/fritzbox-exporter.nix` + +- `services/network-filesystems/kbfs.nix` + +- `services/networking/dnscache.nix` + +- `services/networking/fireqos.nix` + +- `services/networking/iwd.nix` + +- `services/networking/keepalived/default.nix` + +- `services/networking/keybase.nix` + +- `services/networking/lldpd.nix` + +- `services/networking/matterbridge.nix` + +- `services/networking/squid.nix` + +- `services/networking/tinydns.nix` + +- `services/networking/xrdp.nix` + +- `services/security/shibboleth-sp.nix` + +- `services/security/sks.nix` + +- `services/security/sshguard.nix` + +- `services/security/torify.nix` + +- `services/security/usbguard.nix` + +- `services/security/vault.nix` + +- `services/system/earlyoom.nix` + +- `services/system/saslauthd.nix` + +- `services/web-apps/nexus.nix` + +- `services/web-apps/pgpkeyserver-lite.nix` + +- `services/web-apps/piwik.nix` + +- `services/web-servers/lighttpd/collectd.nix` + +- `services/web-servers/minio.nix` + +- `services/x11/display-managers/xpra.nix` + +- `services/x11/xautolock.nix` + +- `tasks/filesystems/bcachefs.nix` + +- `tasks/powertop.nix` + +## Backward Incompatibilities {#sec-release-17.09-incompatibilities} + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- **In an Qemu-based virtualization environment, the network interface names changed from i.e. `enp0s3` to `ens3`.** + + This is due to a kernel configuration change. The new naming is consistent with those of other Linux distributions with systemd. See [\#29197](https://github.com/NixOS/nixpkgs/issues/29197) for more information. + + A machine is affected if the `virt-what` tool either returns `qemu` or `kvm` _and_ has interface names used in any part of its NixOS configuration, in particular if a static network configuration with `networking.interfaces` is used. + + Before rebooting affected machines, please ensure: + + - Change the interface names in your NixOS configuration. The first interface will be called `ens3`, the second one `ens8` and starting from there incremented by 1. + + - After changing the interface names, rebuild your system with `nixos-rebuild boot` to activate the new configuration after a reboot. If you switch to the new configuration right away you might lose network connectivity! If using `nixops`, deploy with `nixops deploy --force-reboot`. + +- The following changes apply if the `stateVersion` is changed to 17.09 or higher. For `stateVersion = "17.03"` or lower the old behavior is preserved. + + - The `postgres` default version was changed from 9.5 to 9.6. + + - The `postgres` superuser name has changed from `root` to `postgres` to more closely follow what other Linux distributions are doing. + + - The `postgres` default `dataDir` has changed from `/var/db/postgres` to `/var/lib/postgresql/$psqlSchema` where \$psqlSchema is 9.6 for example. + + - The `mysql` default `dataDir` has changed from `/var/mysql` to `/var/lib/mysql`. + + - Radicale\'s default package has changed from 1.x to 2.x. Instructions to migrate can be found [ here ](http://radicale.org/1to2/). It is also possible to use the newer version by setting the `package` to `radicale2`, which is done automatically when `stateVersion` is 17.09 or higher. The `extraArgs` option has been added to allow passing the data migration arguments specified in the instructions; see the `radicale.nix` NixOS test for an example migration. + +- The `aiccu` package was removed. This is due to SixXS [ sunsetting](https://www.sixxs.net/main/) its IPv6 tunnel. + +- The `fanctl` package and `fan` module have been removed due to the developers not upstreaming their iproute2 patches and lagging with compatibility to recent iproute2 versions. + +- Top-level `idea` package collection was renamed. All JetBrains IDEs are now at `jetbrains`. + +- `flexget`\'s state database cannot be upgraded to its new internal format, requiring removal of any existing `db-config.sqlite` which will be automatically recreated. + +- The `ipfs` service now doesn\'t ignore the `dataDir` option anymore. If you\'ve ever set this option to anything other than the default you\'ll have to either unset it (so the default gets used) or migrate the old data manually with + + ```ShellSession + dataDir= + mv /var/lib/ipfs/.ipfs/* $dataDir + rmdir /var/lib/ipfs/.ipfs + ``` + +- The `caddy` service was previously using an extra `.caddy` directory in the data directory specified with the `dataDir` option. The contents of the `.caddy` directory are now expected to be in the `dataDir`. + +- The `ssh-agent` user service is not started by default anymore. Use `programs.ssh.startAgent` to enable it if needed. There is also a new `programs.gnupg.agent` module that creates a `gpg-agent` user service. It can also serve as a SSH agent if `enableSSHSupport` is set. + +- The `services.tinc.networks..listenAddress` option had a misleading name that did not correspond to its behavior. It now correctly defines the ip to listen for incoming connections on. To keep the previous behaviour, use `services.tinc.networks..bindToAddress` instead. Refer to the description of the options for more details. + +- `tlsdate` package and module were removed. This is due to the project being dead and not building with openssl 1.1. + +- `wvdial` package and module were removed. This is due to the project being dead and not building with openssl 1.1. + +- `cc-wrapper`\'s setup-hook now exports a number of environment variables corresponding to binutils binaries, (e.g. `LD`, `STRIP`, `RANLIB`, etc). This is done to prevent packages\' build systems guessing, which is harder to predict, especially when cross-compiling. However, some packages have broken due to this---their build systems either not supporting, or claiming to support without adequate testing, taking such environment variables as parameters. + +- `services.firefox.syncserver` now runs by default as a non-root user. To accomodate this change, the default sqlite database location has also been changed. Migration should work automatically. Refer to the description of the options for more details. + +- The `compiz` window manager and package was removed. The system support had been broken for several years. + +- Touchpad support should now be enabled through `libinput` as `synaptics` is now deprecated. See the option `services.xserver.libinput.enable`. + +- grsecurity/PaX support has been dropped, following upstream\'s decision to cease free support. See [ upstream\'s announcement](https://grsecurity.net/passing_the_baton.php) for more information. No complete replacement for grsecurity/PaX is available presently. + +- `services.mysql` now has declarative configuration of databases and users with the `ensureDatabases` and `ensureUsers` options. + + These options will never delete existing databases and users, especially not when the value of the options are changed. + + The MySQL users will be identified using [ Unix socket authentication](https://mariadb.com/kb/en/library/authentication-plugin-unix-socket/). This authenticates the Unix user with the same name only, and that without the need for a password. + + If you have previously created a MySQL `root` user _with a password_, you will need to add `root` user for unix socket authentication before using the new options. This can be done by running the following SQL script: + + ```SQL + CREATE USER 'root'@'%' IDENTIFIED BY ''; + GRANT ALL PRIVILEGES ON *.* TO 'root'@'%' WITH GRANT OPTION; + FLUSH PRIVILEGES; + + -- Optionally, delete the password-authenticated user: + -- DROP USER 'root'@'localhost'; + ``` + +- `services.mysqlBackup` now works by default without any user setup, including for users other than `mysql`. + + By default, the `mysql` user is no longer the user which performs the backup. Instead a system account `mysqlbackup` is used. + + The `mysqlBackup` service is also now using systemd timers instead of `cron`. + + Therefore, the `services.mysqlBackup.period` option no longer exists, and has been replaced with `services.mysqlBackup.calendar`, which is in the format of [systemd.time(7)](https://www.freedesktop.org/software/systemd/man/systemd.time.html#Calendar%20Events). + + If you expect to be sent an e-mail when the backup fails, consider using a script which monitors the systemd journal for errors. Regretfully, at present there is no built-in functionality for this. + + You can check that backups still work by running `systemctl start mysql-backup` then `systemctl status mysql-backup`. + +- Templated systemd services e.g `container@name` are now handled currectly when switching to a new configuration, resulting in them being reloaded. + +- Steam: the `newStdcpp` parameter was removed and should not be needed anymore. + +- Redis has been updated to version 4 which mandates a cluster mass-restart, due to changes in the network handling, in order to ensure compatibility with networks NATing traffic. + +## Other Notable Changes {#sec-release-17.09-notable-changes} + +- Modules can now be disabled by using [ disabledModules](https://nixos.org/nixpkgs/manual/#sec-replace-modules), allowing another to take it\'s place. This can be used to import a set of modules from another channel while keeping the rest of the system on a stable release. + +- Updated to FreeType 2.7.1, including a new TrueType engine. The new engine replaces the Infinality engine which was the default in NixOS. The default font rendering settings are now provided by fontconfig-penultimate, replacing fontconfig-ultimate; the new defaults are less invasive and provide rendering that is more consistent with other systems and hopefully with each font designer\'s intent. Some system-wide configuration has been removed from the Fontconfig NixOS module where user Fontconfig settings are available. + +- ZFS/SPL have been updated to 0.7.0, `zfsUnstable, splUnstable` have therefore been removed. + +- The `time.timeZone` option now allows the value `null` in addition to timezone strings. This value allows changing the timezone of a system imperatively using `timedatectl set-timezone`. The default timezone is still UTC. + +- Nixpkgs overlays may now be specified with a file as well as a directory. The value of `` may be a file, and `~/.config/nixpkgs/overlays.nix` can be used instead of the `~/.config/nixpkgs/overlays` directory. + + See the overlays chapter of the Nixpkgs manual for more details. + +- Definitions for `/etc/hosts` can now be specified declaratively with `networking.hosts`. + +- Two new options have been added to the installer loader, in addition to the default having changed. The kernel log verbosity has been lowered to the upstream default for the default options, in order to not spam the console when e.g. joining a network. + + This therefore leads to adding a new `debug` option to set the log level to the previous verbose mode, to make debugging easier, but still accessible easily. + + Additionally a `copytoram` option has been added, which makes it possible to remove the install medium after booting. This allows tethering from your phone after booting from it. + +- `services.gitlab-runner.configOptions` has been added to specify the configuration of gitlab-runners declaratively. + +- `services.jenkins.plugins` has been added to install plugins easily, this can be generated with jenkinsPlugins2nix. + +- `services.postfix.config` has been added to specify the main.cf with NixOS options. Additionally other options have been added to the postfix module and has been improved further. + +- The GitLab package and module have been updated to the latest 10.0 release. + +- The `systemd-boot` boot loader now lists the NixOS version, kernel version and build date of all bootable generations. + +- The dnscrypt-proxy service now defaults to using a random upstream resolver, selected from the list of public non-logging resolvers with DNSSEC support. Existing configurations can be migrated to this mode of operation by omitting the `services.dnscrypt-proxy.resolverName` option or setting it to `"random"`. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1709.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1709.xml deleted file mode 100644 index 795c51d292..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1709.xml +++ /dev/null @@ -1,899 +0,0 @@ -
- Release 17.09 (“Hummingbird”, 2017/09/??) - -
- Highlights - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - - - The GNOME version is now 3.24. KDE Plasma was upgraded to 5.10, KDE - Applications to 17.08.1 and KDE Frameworks to 5.37. - - - - - The user handling now keeps track of deallocated UIDs/GIDs. When a user or - group is revived, this allows it to be allocated the UID/GID it had - before. A consequence is that UIDs and GIDs are no longer reused. - - - - - The module option now causes - the first head specified in this list to be set as the primary head. Apart - from that, it's now possible to also set additional options by using an - attribute set, for example: - -{ services.xserver.xrandrHeads = [ - "HDMI-0" - { - output = "DVI-0"; - primary = true; - monitorConfig = '' - Option "Rotate" "right" - ''; - } - ]; -} - - This will set the DVI-0 output to be the primary head, - even though HDMI-0 is the first head in the list. - - - - - The handling of SSL in the services.nginx module has - been cleaned up, renaming the misnamed enableSSL to - onlySSL which reflects its original intention. This is - not to be used with the already existing forceSSL which - creates a second non-SSL virtual host redirecting to the SSL virtual host. - This by chance had worked earlier due to specific implementation details. - In case you had specified both please remove the - enableSSL option to keep the previous behaviour. - - - Another addSSL option has been introduced to configure - both a non-SSL virtual host and an SSL virtual host with the same - configuration. - - - Options to configure resolver options and - upstream blocks have been introduced. See their - information for further details. - - - The port option has been replaced by a more generic - listen option which makes it possible to specify - multiple addresses, ports and SSL configs dependant on the new SSL - handling mentioned above. - - - -
- -
- New Services - - - The following new services were added since the last release: - - - - - - config/fonts/fontconfig-penultimate.nix - - - - - config/fonts/fontconfig-ultimate.nix - - - - - config/terminfo.nix - - - - - hardware/sensor/iio.nix - - - - - hardware/nitrokey.nix - - - - - hardware/raid/hpsa.nix - - - - - programs/browserpass.nix - - - - - programs/gnupg.nix - - - - - programs/qt5ct.nix - - - - - programs/slock.nix - - - - - programs/thefuck.nix - - - - - security/auditd.nix - - - - - security/lock-kernel-modules.nix - - - - - service-managers/docker.nix - - - - - service-managers/trivial.nix - - - - - services/admin/salt/master.nix - - - - - services/admin/salt/minion.nix - - - - - services/audio/slimserver.nix - - - - - services/cluster/kubernetes/default.nix - - - - - services/cluster/kubernetes/dns.nix - - - - - services/cluster/kubernetes/dashboard.nix - - - - - services/continuous-integration/hail.nix - - - - - services/databases/clickhouse.nix - - - - - services/databases/postage.nix - - - - - services/desktops/gnome3/gnome-disks.nix - - - - - services/desktops/gnome3/gpaste.nix - - - - - services/logging/SystemdJournal2Gelf.nix - - - - - services/logging/heartbeat.nix - - - - - services/logging/journalwatch.nix - - - - - services/logging/syslogd.nix - - - - - services/mail/mailhog.nix - - - - - services/mail/nullmailer.nix - - - - - services/misc/airsonic.nix - - - - - services/misc/autorandr.nix - - - - - services/misc/exhibitor.nix - - - - - services/misc/fstrim.nix - - - - - services/misc/gollum.nix - - - - - services/misc/irkerd.nix - - - - - services/misc/jackett.nix - - - - - services/misc/radarr.nix - - - - - services/misc/snapper.nix - - - - - services/monitoring/osquery.nix - - - - - services/monitoring/prometheus/collectd-exporter.nix - - - - - services/monitoring/prometheus/fritzbox-exporter.nix - - - - - services/network-filesystems/kbfs.nix - - - - - services/networking/dnscache.nix - - - - - services/networking/fireqos.nix - - - - - services/networking/iwd.nix - - - - - services/networking/keepalived/default.nix - - - - - services/networking/keybase.nix - - - - - services/networking/lldpd.nix - - - - - services/networking/matterbridge.nix - - - - - services/networking/squid.nix - - - - - services/networking/tinydns.nix - - - - - services/networking/xrdp.nix - - - - - services/security/shibboleth-sp.nix - - - - - services/security/sks.nix - - - - - services/security/sshguard.nix - - - - - services/security/torify.nix - - - - - services/security/usbguard.nix - - - - - services/security/vault.nix - - - - - services/system/earlyoom.nix - - - - - services/system/saslauthd.nix - - - - - services/web-apps/nexus.nix - - - - - services/web-apps/pgpkeyserver-lite.nix - - - - - services/web-apps/piwik.nix - - - - - services/web-servers/lighttpd/collectd.nix - - - - - services/web-servers/minio.nix - - - - - services/x11/display-managers/xpra.nix - - - - - services/x11/xautolock.nix - - - - - tasks/filesystems/bcachefs.nix - - - - - tasks/powertop.nix - - - -
- -
- Backward Incompatibilities - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - - In an Qemu-based virtualization environment, the - network interface names changed from i.e. enp0s3 to - ens3. - - - This is due to a kernel configuration change. The new naming is consistent - with those of other Linux distributions with systemd. See - #29197 - for more information. - - - A machine is affected if the virt-what tool either - returns qemu or kvm - and has interface names used in any part of its NixOS - configuration, in particular if a static network configuration with - networking.interfaces is used. - - - Before rebooting affected machines, please ensure: - - - - Change the interface names in your NixOS configuration. The first - interface will be called ens3, the second one - ens8 and starting from there incremented by 1. - - - - - After changing the interface names, rebuild your system with - nixos-rebuild boot to activate the new configuration - after a reboot. If you switch to the new configuration right away you - might lose network connectivity! If using nixops, - deploy with nixops deploy --force-reboot. - - - - - - - - The following changes apply if the stateVersion is - changed to 17.09 or higher. For stateVersion = "17.03" - or lower the old behavior is preserved. - - - - - The postgres default version was changed from 9.5 to - 9.6. - - - - - The postgres superuser name has changed from - root to postgres to more closely - follow what other Linux distributions are doing. - - - - - The postgres default dataDir has - changed from /var/db/postgres to - /var/lib/postgresql/$psqlSchema where $psqlSchema is - 9.6 for example. - - - - - The mysql default dataDir has - changed from /var/mysql to - /var/lib/mysql. - - - - - Radicale's default package has changed from 1.x to 2.x. Instructions to - migrate can be found here - . It is also possible to use the newer version by setting the - package to radicale2, which is - done automatically when stateVersion is 17.09 or - higher. The extraArgs option has been added to allow - passing the data migration arguments specified in the instructions; see - the - radicale.nix - NixOS test for an example migration. - - - - - - - The aiccu package was removed. This is due to SixXS - sunsetting its IPv6 - tunnel. - - - - - The fanctl package and fan module - have been removed due to the developers not upstreaming their iproute2 - patches and lagging with compatibility to recent iproute2 versions. - - - - - Top-level idea package collection was renamed. All - JetBrains IDEs are now at jetbrains. - - - - - flexget's state database cannot be upgraded to its new - internal format, requiring removal of any existing - db-config.sqlite which will be automatically recreated. - - - - - The ipfs service now doesn't ignore the - dataDir option anymore. If you've ever set this option - to anything other than the default you'll have to either unset it (so the - default gets used) or migrate the old data manually with - -dataDir=<valueOfDataDir> -mv /var/lib/ipfs/.ipfs/* $dataDir -rmdir /var/lib/ipfs/.ipfs - - - - - - The caddy service was previously using an extra - .caddy directory in the data directory specified with - the dataDir option. The contents of the - .caddy directory are now expected to be in the - dataDir. - - - - - The ssh-agent user service is not started by default - anymore. Use programs.ssh.startAgent to enable it if - needed. There is also a new programs.gnupg.agent module - that creates a gpg-agent user service. It can also - serve as a SSH agent if enableSSHSupport is set. - - - - - The services.tinc.networks.<name>.listenAddress - option had a misleading name that did not correspond to its behavior. It - now correctly defines the ip to listen for incoming connections on. To - keep the previous behaviour, use - services.tinc.networks.<name>.bindToAddress - instead. Refer to the description of the options for more details. - - - - - tlsdate package and module were removed. This is due to - the project being dead and not building with openssl 1.1. - - - - - wvdial package and module were removed. This is due to - the project being dead and not building with openssl 1.1. - - - - - cc-wrapper's setup-hook now exports a number of - environment variables corresponding to binutils binaries, (e.g. - LD, STRIP, RANLIB, etc). This - is done to prevent packages' build systems guessing, which is harder to - predict, especially when cross-compiling. However, some packages have - broken due to this—their build systems either not supporting, or - claiming to support without adequate testing, taking such environment - variables as parameters. - - - - - services.firefox.syncserver now runs by default as a - non-root user. To accomodate this change, the default sqlite database - location has also been changed. Migration should work automatically. Refer - to the description of the options for more details. - - - - - The compiz window manager and package was removed. The - system support had been broken for several years. - - - - - Touchpad support should now be enabled through libinput - as synaptics is now deprecated. See the option - services.xserver.libinput.enable. - - - - - grsecurity/PaX support has been dropped, following upstream's decision to - cease free support. See - - upstream's announcement for more information. No complete - replacement for grsecurity/PaX is available presently. - - - - - services.mysql now has declarative configuration of - databases and users with the ensureDatabases and - ensureUsers options. - - - These options will never delete existing databases and users, especially - not when the value of the options are changed. - - - The MySQL users will be identified using - - Unix socket authentication. This authenticates the Unix user with - the same name only, and that without the need for a password. - - - If you have previously created a MySQL root user - with a password, you will need to add - root user for unix socket authentication before using - the new options. This can be done by running the following SQL script: - -CREATE USER 'root'@'%' IDENTIFIED BY ''; -GRANT ALL PRIVILEGES ON *.* TO 'root'@'%' WITH GRANT OPTION; -FLUSH PRIVILEGES; - --- Optionally, delete the password-authenticated user: --- DROP USER 'root'@'localhost'; - - - - - - services.mysqlBackup now works by default without any - user setup, including for users other than mysql. - - - By default, the mysql user is no longer the user which - performs the backup. Instead a system account - mysqlbackup is used. - - - The mysqlBackup service is also now using systemd - timers instead of cron. - - - Therefore, the services.mysqlBackup.period option no - longer exists, and has been replaced with - services.mysqlBackup.calendar, which is in the format - of - systemd.time(7). - - - If you expect to be sent an e-mail when the backup fails, consider using a - script which monitors the systemd journal for errors. Regretfully, at - present there is no built-in functionality for this. - - - You can check that backups still work by running systemctl start - mysql-backup then systemctl status - mysql-backup. - - - - - Templated systemd services e.g container@name are now - handled currectly when switching to a new configuration, resulting in them - being reloaded. - - - - - Steam: the newStdcpp parameter was removed and should - not be needed anymore. - - - - - Redis has been updated to version 4 which mandates a cluster mass-restart, - due to changes in the network handling, in order to ensure compatibility - with networks NATing traffic. - - - -
- -
- Other Notable Changes - - - - - Modules can now be disabled by using - - disabledModules, allowing another to take it's place. This can be - used to import a set of modules from another channel while keeping the - rest of the system on a stable release. - - - - - Updated to FreeType 2.7.1, including a new TrueType engine. The new engine - replaces the Infinality engine which was the default in NixOS. The default - font rendering settings are now provided by fontconfig-penultimate, - replacing fontconfig-ultimate; the new defaults are less invasive and - provide rendering that is more consistent with other systems and hopefully - with each font designer's intent. Some system-wide configuration has been - removed from the Fontconfig NixOS module where user Fontconfig settings - are available. - - - - - ZFS/SPL have been updated to 0.7.0, zfsUnstable, - splUnstable have therefore been removed. - - - - - The option now allows the value - null in addition to timezone strings. This value allows - changing the timezone of a system imperatively using timedatectl - set-timezone. The default timezone is still UTC. - - - - - Nixpkgs overlays may now be specified with a file as well as a directory. - The value of <nixpkgs-overlays> may be a file, and - ~/.config/nixpkgs/overlays.nix can be used instead of - the ~/.config/nixpkgs/overlays directory. - - - See the overlays chapter of the Nixpkgs manual for more details. - - - - - Definitions for /etc/hosts can now be specified - declaratively with networking.hosts. - - - - - Two new options have been added to the installer loader, in addition to - the default having changed. The kernel log verbosity has been lowered to - the upstream default for the default options, in order to not spam the - console when e.g. joining a network. - - - This therefore leads to adding a new debug option to - set the log level to the previous verbose mode, to make debugging easier, - but still accessible easily. - - - Additionally a copytoram option has been added, which - makes it possible to remove the install medium after booting. This allows - tethering from your phone after booting from it. - - - - - services.gitlab-runner.configOptions has been added to - specify the configuration of gitlab-runners declaratively. - - - - - services.jenkins.plugins has been added to install - plugins easily, this can be generated with jenkinsPlugins2nix. - - - - - services.postfix.config has been added to specify the - main.cf with NixOS options. Additionally other options have been added to - the postfix module and has been improved further. - - - - - The GitLab package and module have been updated to the latest 10.0 - release. - - - - - The systemd-boot boot loader now lists the NixOS - version, kernel version and build date of all bootable generations. - - - - - The dnscrypt-proxy service now defaults to using a random upstream - resolver, selected from the list of public non-logging resolvers with - DNSSEC support. Existing configurations can be migrated to this mode of - operation by omitting the - option or setting it - to "random". - - - -
-
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1803.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1803.section.md new file mode 100644 index 0000000000..e4e4679810 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1803.section.md @@ -0,0 +1,284 @@ +# Release 18.03 ("Impala", 2018/04/04) {#sec-release-18.03} + +## Highlights {#sec-release-18.03-highlights} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- End of support is planned for end of October 2018, handing over to 18.09. + +- Platform support: x86_64-linux and x86_64-darwin since release time (the latter isn\'t NixOS, really). Binaries for aarch64-linux are available, but no channel exists yet, as it\'s waiting for some test fixes, etc. + +- Nix now defaults to 2.0; see its [release notes](https://nixos.org/nix/manual/#ssec-relnotes-2.0). + +- Core version changes: linux: 4.9 -\> 4.14, glibc: 2.25 -\> 2.26, gcc: 6 -\> 7, systemd: 234 -\> 237. + +- Desktop version changes: gnome: 3.24 -\> 3.26, (KDE) plasma-desktop: 5.10 -\> 5.12. + +- MariaDB 10.2, updated from 10.1, is now the default MySQL implementation. While upgrading a few changes have been made to the infrastructure involved: + + - `libmysql` has been deprecated, please use `mysql.connector-c` instead, a compatibility passthru has been added to the MySQL packages. + + - The `mysql57` package has a new `static` output containing the static libraries including `libmysqld.a` + +- PHP now defaults to PHP 7.2, updated from 7.1. + +## New Services {#sec-release-18.03-new-services} + +The following new services were added since the last release: + +- `./config/krb5/default.nix` + +- `./hardware/digitalbitbox.nix` + +- `./misc/label.nix` + +- `./programs/ccache.nix` + +- `./programs/criu.nix` + +- `./programs/digitalbitbox/default.nix` + +- `./programs/less.nix` + +- `./programs/npm.nix` + +- `./programs/plotinus.nix` + +- `./programs/rootston.nix` + +- `./programs/systemtap.nix` + +- `./programs/sway.nix` + +- `./programs/udevil.nix` + +- `./programs/way-cooler.nix` + +- `./programs/yabar.nix` + +- `./programs/zsh/zsh-autoenv.nix` + +- `./services/backup/borgbackup.nix` + +- `./services/backup/crashplan-small-business.nix` + +- `./services/desktops/dleyna-renderer.nix` + +- `./services/desktops/dleyna-server.nix` + +- `./services/desktops/pipewire.nix` + +- `./services/desktops/gnome3/chrome-gnome-shell.nix` + +- `./services/desktops/gnome3/tracker-miners.nix` + +- `./services/hardware/fwupd.nix` + +- `./services/hardware/interception-tools.nix` + +- `./services/hardware/u2f.nix` + +- `./services/hardware/usbmuxd.nix` + +- `./services/mail/clamsmtp.nix` + +- `./services/mail/dkimproxy-out.nix` + +- `./services/mail/pfix-srsd.nix` + +- `./services/misc/gitea.nix` + +- `./services/misc/home-assistant.nix` + +- `./services/misc/ihaskell.nix` + +- `./services/misc/logkeys.nix` + +- `./services/misc/novacomd.nix` + +- `./services/misc/osrm.nix` + +- `./services/misc/plexpy.nix` + +- `./services/misc/pykms.nix` + +- `./services/misc/tzupdate.nix` + +- `./services/monitoring/fusion-inventory.nix` + +- `./services/monitoring/prometheus/exporters.nix` + +- `./services/network-filesystems/beegfs.nix` + +- `./services/network-filesystems/davfs2.nix` + +- `./services/network-filesystems/openafs/client.nix` + +- `./services/network-filesystems/openafs/server.nix` + +- `./services/network-filesystems/ceph.nix` + +- `./services/networking/aria2.nix` + +- `./services/networking/monero.nix` + +- `./services/networking/nghttpx/default.nix` + +- `./services/networking/nixops-dns.nix` + +- `./services/networking/rxe.nix` + +- `./services/networking/stunnel.nix` + +- `./services/web-apps/matomo.nix` + +- `./services/web-apps/restya-board.nix` + +- `./services/web-servers/mighttpd2.nix` + +- `./services/x11/fractalart.nix` + +- `./system/boot/binfmt.nix` + +- `./system/boot/grow-partition.nix` + +- `./tasks/filesystems/ecryptfs.nix` + +- `./virtualisation/hyperv-guest.nix` + +## Backward Incompatibilities {#sec-release-18.03-incompatibilities} + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- `sound.enable` now defaults to false. + +- Dollar signs in options under `services.postfix` are passed verbatim to Postfix, which will interpret them as the beginning of a parameter expression. This was already true for string-valued options in the previous release, but not for list-valued options. If you need to pass literal dollar signs through Postfix, double them. + +- The `postage` package (for web-based PostgreSQL administration) has been renamed to `pgmanage`. The corresponding module has also been renamed. To migrate please rename all `services.postage` options to `services.pgmanage`. + +- Package attributes starting with a digit have been prefixed with an underscore sign. This is to avoid quoting in the configuration and other issues with command-line tools like `nix-env`. The change affects the following packages: + + - `2048-in-terminal` → `_2048-in-terminal` + + - `90secondportraits` → `_90secondportraits` + + - `2bwm` → `_2bwm` + + - `389-ds-base` → `_389-ds-base` + +- **The OpenSSH service no longer enables support for DSA keys by default, which could cause a system lock out. Update your keys or, unfavorably, re-enable DSA support manually.** + + DSA support was [deprecated in OpenSSH 7.0](https://www.openssh.com/legacy.html), due to it being too weak. To re-enable support, add `PubkeyAcceptedKeyTypes +ssh-dss` to the end of your `services.openssh.extraConfig`. + + After updating the keys to be stronger, anyone still on a pre-17.03 version is safe to jump to 17.03, as vetted [here](https://search.nix.gsc.io/?q=stateVersion). + +- The `openssh` package now includes Kerberos support by default; the `openssh_with_kerberos` package is now a deprecated alias. If you do not want Kerberos support, you can do `openssh.override { withKerberos = false; }`. Note, this also applies to the `openssh_hpn` package. + +- `cc-wrapper` has been split in two; there is now also a `bintools-wrapper`. The most commonly used files in `nix-support` are now split between the two wrappers. Some commonly used ones, like `nix-support/dynamic-linker`, are duplicated for backwards compatability, even though they rightly belong only in `bintools-wrapper`. Other more obscure ones are just moved. + +- The propagation logic has been changed. The new logic, along with new types of dependencies that go with, is thoroughly documented in the \"Specifying dependencies\" section of the \"Standard Environment\" chapter of the nixpkgs manual. The old logic isn\'t but is easy to describe: dependencies were propagated as the same type of dependency no matter what. In practice, that means that many `propagatedNativeBuildInputs` should instead be `propagatedBuildInputs`. Thankfully, that was and is the least used type of dependency. Also, it means that some `propagatedBuildInputs` should instead be `depsTargetTargetPropagated`. Other types dependencies should be unaffected. + +- `lib.addPassthru drv passthru` is removed. Use `lib.extendDerivation true passthru drv` instead. + +- The `memcached` service no longer accept dynamic socket paths via `services.memcached.socket`. Unix sockets can be still enabled by `services.memcached.enableUnixSocket` and will be accessible at `/run/memcached/memcached.sock`. + +- The `hardware.amdHybridGraphics.disable` option was removed for lack of a maintainer. If you still need this module, you may wish to include a copy of it from an older version of nixos in your imports. + +- The merging of config options for `services.postfix.config` was buggy. Previously, if other options in the Postfix module like `services.postfix.useSrs` were set and the user set config options that were also set by such options, the resulting config wouldn\'t include all options that were needed. They are now merged correctly. If config options need to be overridden, `lib.mkForce` or `lib.mkOverride` can be used. + +- The following changes apply if the `stateVersion` is changed to 18.03 or higher. For `stateVersion = "17.09"` or lower the old behavior is preserved. + + - `matrix-synapse` uses postgresql by default instead of sqlite. Migration instructions can be found [ here ](https://github.com/matrix-org/synapse/blob/master/docs/postgres.rst#porting-from-sqlite). + +- The `jid` package has been removed, due to maintenance overhead of a go package having non-versioned dependencies. + +- When using `services.xserver.libinput` (enabled by default in GNOME), it now handles all input devices, not just touchpads. As a result, you might need to re-evaluate any custom Xorg configuration. In particular, `Option "XkbRules" "base"` may result in broken keyboard layout. + +- The `attic` package was removed. A maintained fork called [Borg](https://www.borgbackup.org/) should be used instead. Migration instructions can be found [here](http://borgbackup.readthedocs.io/en/stable/usage/upgrade.html#attic-and-borg-0-xx-to-borg-1-x). + +- The Piwik analytics software was renamed to Matomo: + + - The package `pkgs.piwik` was renamed to `pkgs.matomo`. + + - The service `services.piwik` was renamed to `services.matomo`. + + - The data directory `/var/lib/piwik` was renamed to `/var/lib/matomo`. All files will be moved automatically on first startup, but you might need to adjust your backup scripts. + + - The default `serverName` for the nginx configuration changed from `piwik.${config.networking.hostName}` to `matomo.${config.networking.hostName}.${config.networking.domain}` if `config.networking.domain` is set, `matomo.${config.networking.hostName}` if it is not set. If you change your `serverName`, remember you\'ll need to update the `trustedHosts[]` array in `/var/lib/matomo/config/config.ini.php` as well. + + - The `piwik` user was renamed to `matomo`. The service will adjust ownership automatically for files in the data directory. If you use unix socket authentication, remember to give the new `matomo` user access to the database and to change the `username` to `matomo` in the `[database]` section of `/var/lib/matomo/config/config.ini.php`. + + - If you named your database \`piwik\`, you might want to rename it to \`matomo\` to keep things clean, but this is neither enforced nor required. + +- `nodejs-4_x` is end-of-life. `nodejs-4_x`, `nodejs-slim-4_x` and `nodePackages_4_x` are removed. + +- The `pump.io` NixOS module was removed. It is now maintained as an [external module](https://github.com/rvl/pump.io-nixos). + +- The Prosody XMPP server has received a major update. The following modules were renamed: + + - `services.prosody.modules.httpserver` is now `services.prosody.modules.http_files` + + - `services.prosody.modules.console` is now `services.prosody.modules.admin_telnet` + + Many new modules are now core modules, most notably `services.prosody.modules.carbons` and `services.prosody.modules.mam`. + + The better-performing `libevent` backend is now enabled by default. + + `withCommunityModules` now passes through the modules to `services.prosody.extraModules`. Use `withOnlyInstalledCommunityModules` for modules that should not be enabled directly, e.g `lib_ldap`. + +- All prometheus exporter modules are now defined as submodules. The exporters are configured using `services.prometheus.exporters`. + +## Other Notable Changes {#sec-release-18.03-notable-changes} + +- ZNC option `services.znc.mutable` now defaults to `true`. That means that old configuration is not overwritten by default when update to the znc options are made. + +- The option `networking.wireless.networks..auth` has been added for wireless networks with WPA-Enterprise authentication. There is also a new `extraConfig` option to directly configure `wpa_supplicant` and `hidden` to connect to hidden networks. + +- In the module `networking.interfaces.` the following options have been removed: + + - `ipAddress` + + - `ipv6Address` + + - `prefixLength` + + - `ipv6PrefixLength` + + - `subnetMask` + + To assign static addresses to an interface the options `ipv4.addresses` and `ipv6.addresses` should be used instead. The options `ip4` and `ip6` have been renamed to `ipv4.addresses` `ipv6.addresses` respectively. The new options `ipv4.routes` and `ipv6.routes` have been added to set up static routing. + +- The option `services.logstash.listenAddress` is now `127.0.0.1` by default. Previously the default behaviour was to listen on all interfaces. + +- `services.btrfs.autoScrub` has been added, to periodically check btrfs filesystems for data corruption. If there\'s a correct copy available, it will automatically repair corrupted blocks. + +- `displayManager.lightdm.greeters.gtk.clock-format.` has been added, the clock format string (as expected by strftime, e.g. `%H:%M`) to use with the lightdm gtk greeter panel. + + If set to null the default clock format is used. + +- `displayManager.lightdm.greeters.gtk.indicators` has been added, a list of allowed indicator modules to use with the lightdm gtk greeter panel. + + Built-in indicators include `~a11y`, `~language`, `~session`, `~power`, `~clock`, `~host`, `~spacer`. Unity indicators can be represented by short name (e.g. `sound`, `power`), service file name, or absolute path. + + If set to `null` the default indicators are used. + + In order to have the previous default configuration add + + ```nix + { + services.xserver.displayManager.lightdm.greeters.gtk.indicators = [ + "~host" "~spacer" + "~clock" "~spacer" + "~session" + "~language" + "~a11y" + "~power" + ]; + } + ``` + + to your `configuration.nix`. + +- The NixOS test driver supports user services declared by `systemd.user.services`. The methods `waitForUnit`, `getUnitInfo`, `startJob` and `stopJob` provide an optional `$user` argument for that purpose. + +- Enabling bash completion on NixOS, `programs.bash.enableCompletion`, will now also enable completion for the Nix command line tools by installing the [nix-bash-completions](https://github.com/hedning/nix-bash-completions) package. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1803.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1803.xml deleted file mode 100644 index c14679eea0..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1803.xml +++ /dev/null @@ -1,855 +0,0 @@ -
- Release 18.03 (“Impala”, 2018/04/04) - -
- Highlights - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - - - End of support is planned for end of October 2018, handing over to 18.09. - - - - - Platform support: x86_64-linux and x86_64-darwin since release time (the - latter isn't NixOS, really). Binaries for aarch64-linux are available, but - no channel exists yet, as it's waiting for some test fixes, etc. - - - - - Nix now defaults to 2.0; see its - release - notes. - - - - - Core version changes: linux: 4.9 -> 4.14, glibc: 2.25 -> 2.26, gcc: 6 -> - 7, systemd: 234 -> 237. - - - - - Desktop version changes: gnome: 3.24 -> 3.26, (KDE) plasma-desktop: 5.10 - -> 5.12. - - - - - MariaDB 10.2, updated from 10.1, is now the default MySQL implementation. - While upgrading a few changes have been made to the infrastructure - involved: - - - - libmysql has been deprecated, please use - mysql.connector-c instead, a compatibility passthru - has been added to the MySQL packages. - - - - - The mysql57 package has a new - static output containing the static libraries - including libmysqld.a - - - - - - - - PHP now defaults to PHP 7.2, updated from 7.1. - - - -
- -
- New Services - - - The following new services were added since the last release: - - - - - - ./config/krb5/default.nix - - - - - ./hardware/digitalbitbox.nix - - - - - ./misc/label.nix - - - - - ./programs/ccache.nix - - - - - ./programs/criu.nix - - - - - ./programs/digitalbitbox/default.nix - - - - - ./programs/less.nix - - - - - ./programs/npm.nix - - - - - ./programs/plotinus.nix - - - - - ./programs/rootston.nix - - - - - ./programs/systemtap.nix - - - - - ./programs/sway.nix - - - - - ./programs/udevil.nix - - - - - ./programs/way-cooler.nix - - - - - ./programs/yabar.nix - - - - - ./programs/zsh/zsh-autoenv.nix - - - - - ./services/backup/borgbackup.nix - - - - - ./services/backup/crashplan-small-business.nix - - - - - ./services/desktops/dleyna-renderer.nix - - - - - ./services/desktops/dleyna-server.nix - - - - - ./services/desktops/pipewire.nix - - - - - ./services/desktops/gnome3/chrome-gnome-shell.nix - - - - - ./services/desktops/gnome3/tracker-miners.nix - - - - - ./services/hardware/fwupd.nix - - - - - ./services/hardware/interception-tools.nix - - - - - ./services/hardware/u2f.nix - - - - - ./services/hardware/usbmuxd.nix - - - - - ./services/mail/clamsmtp.nix - - - - - ./services/mail/dkimproxy-out.nix - - - - - ./services/mail/pfix-srsd.nix - - - - - ./services/misc/gitea.nix - - - - - ./services/misc/home-assistant.nix - - - - - ./services/misc/ihaskell.nix - - - - - ./services/misc/logkeys.nix - - - - - ./services/misc/novacomd.nix - - - - - ./services/misc/osrm.nix - - - - - ./services/misc/plexpy.nix - - - - - ./services/misc/pykms.nix - - - - - ./services/misc/tzupdate.nix - - - - - ./services/monitoring/fusion-inventory.nix - - - - - ./services/monitoring/prometheus/exporters.nix - - - - - ./services/network-filesystems/beegfs.nix - - - - - ./services/network-filesystems/davfs2.nix - - - - - ./services/network-filesystems/openafs/client.nix - - - - - ./services/network-filesystems/openafs/server.nix - - - - - ./services/network-filesystems/ceph.nix - - - - - ./services/networking/aria2.nix - - - - - ./services/networking/monero.nix - - - - - ./services/networking/nghttpx/default.nix - - - - - ./services/networking/nixops-dns.nix - - - - - ./services/networking/rxe.nix - - - - - ./services/networking/stunnel.nix - - - - - ./services/web-apps/matomo.nix - - - - - ./services/web-apps/restya-board.nix - - - - - ./services/web-servers/mighttpd2.nix - - - - - ./services/x11/fractalart.nix - - - - - ./system/boot/binfmt.nix - - - - - ./system/boot/grow-partition.nix - - - - - ./tasks/filesystems/ecryptfs.nix - - - - - ./virtualisation/hyperv-guest.nix - - - -
- -
- Backward Incompatibilities - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - - sound.enable now defaults to false. - - - - - Dollar signs in options under are passed - verbatim to Postfix, which will interpret them as the beginning of a - parameter expression. This was already true for string-valued options in - the previous release, but not for list-valued options. If you need to pass - literal dollar signs through Postfix, double them. - - - - - The postage package (for web-based PostgreSQL - administration) has been renamed to pgmanage. The - corresponding module has also been renamed. To migrate please rename all - options to - . - - - - - Package attributes starting with a digit have been prefixed with an - underscore sign. This is to avoid quoting in the configuration and other - issues with command-line tools like nix-env. The change - affects the following packages: - - - - 2048-in-terminal → - _2048-in-terminal - - - - - 90secondportraits → - _90secondportraits - - - - - 2bwm → _2bwm - - - - - 389-ds-base → _389-ds-base - - - - - - - - The OpenSSH service no longer enables support for - DSA keys by default, which could cause a system lock out. Update your keys - or, unfavorably, re-enable DSA support manually. - - - DSA support was - deprecated in - OpenSSH 7.0, due to it being too weak. To re-enable support, add - PubkeyAcceptedKeyTypes +ssh-dss to the end of your - . - - - After updating the keys to be stronger, anyone still on a pre-17.03 - version is safe to jump to 17.03, as vetted - here. - - - - - The openssh package now includes Kerberos support by - default; the openssh_with_kerberos package is now a - deprecated alias. If you do not want Kerberos support, you can do - openssh.override { withKerberos = false; }. Note, this - also applies to the openssh_hpn package. - - - - - cc-wrapper has been split in two; there is now also a - bintools-wrapper. The most commonly used files in - nix-support are now split between the two wrappers. - Some commonly used ones, like - nix-support/dynamic-linker, are duplicated for - backwards compatability, even though they rightly belong only in - bintools-wrapper. Other more obscure ones are just - moved. - - - - - The propagation logic has been changed. The new logic, along with new - types of dependencies that go with, is thoroughly documented in the - "Specifying dependencies" section of the "Standard Environment" chapter of - the nixpkgs manual. - - The old logic isn't but is easy to describe: dependencies were propagated - as the same type of dependency no matter what. In practice, that means - that many propagatedNativeBuildInputs should instead - be propagatedBuildInputs. Thankfully, that was and is - the least used type of dependency. Also, it means that some - propagatedBuildInputs should instead be - depsTargetTargetPropagated. Other types dependencies - should be unaffected. - - - - - lib.addPassthru drv passthru is removed. Use - lib.extendDerivation true passthru drv instead. - - - - - The memcached service no longer accept dynamic socket - paths via . Unix sockets can be - still enabled by and - will be accessible at /run/memcached/memcached.sock. - - - - - The hardware.amdHybridGraphics.disable option was - removed for lack of a maintainer. If you still need this module, you may - wish to include a copy of it from an older version of nixos in your - imports. - - - - - The merging of config options for - services.postfix.config was buggy. Previously, if other - options in the Postfix module like - services.postfix.useSrs were set and the user set - config options that were also set by such options, the resulting config - wouldn't include all options that were needed. They are now merged - correctly. If config options need to be overridden, - lib.mkForce or lib.mkOverride can be - used. - - - - - The following changes apply if the stateVersion is - changed to 18.03 or higher. For stateVersion = "17.09" - or lower the old behavior is preserved. - - - - - matrix-synapse uses postgresql by default instead of - sqlite. Migration instructions can be found - - here . - - - - - - - The jid package has been removed, due to maintenance - overhead of a go package having non-versioned dependencies. - - - - - When using (enabled by default - in GNOME), it now handles all input devices, not just touchpads. As a - result, you might need to re-evaluate any custom Xorg configuration. In - particular, Option "XkbRules" "base" may result in - broken keyboard layout. - - - - - The attic package was removed. A maintained fork called - Borg should be used - instead. Migration instructions can be found - here. - - - - - The Piwik analytics software was renamed to Matomo: - - - - The package pkgs.piwik was renamed to - pkgs.matomo. - - - - - The service services.piwik was renamed to - services.matomo. - - - - - The data directory /var/lib/piwik was renamed to - /var/lib/matomo. All files will be moved - automatically on first startup, but you might need to adjust your - backup scripts. - - - - - The default for the nginx configuration - changed from piwik.${config.networking.hostName} to - matomo.${config.networking.hostName}.${config.networking.domain} - if is set, - matomo.${config.networking.hostName} if it is not - set. If you change your , remember you'll - need to update the trustedHosts[] array in - /var/lib/matomo/config/config.ini.php as well. - - - - - The piwik user was renamed to - matomo. The service will adjust ownership - automatically for files in the data directory. If you use unix socket - authentication, remember to give the new matomo user - access to the database and to change the username to - matomo in the [database] section - of /var/lib/matomo/config/config.ini.php. - - - - - If you named your database `piwik`, you might want to rename it to - `matomo` to keep things clean, but this is neither enforced nor - required. - - - - - - - - nodejs-4_x is end-of-life. - nodejs-4_x, nodejs-slim-4_x and - nodePackages_4_x are removed. - - - - - The pump.io NixOS module was removed. It is now - maintained as an - external - module. - - - - - The Prosody XMPP server has received a major update. The following modules - were renamed: - - - - is now - - - - - - is now - - - - - - - Many new modules are now core modules, most notably - and - . - - - The better-performing libevent backend is now enabled - by default. - - - withCommunityModules now passes through the modules to - . Use - withOnlyInstalledCommunityModules for modules that - should not be enabled directly, e.g lib_ldap. - - - - - All prometheus exporter modules are now defined as submodules. The - exporters are configured using - services.prometheus.exporters. - - - -
- -
- Other Notable Changes - - - - - ZNC option now defaults to - true. That means that old configuration is not - overwritten by default when update to the znc options are made. - - - - - The option - has been added for wireless networks with WPA-Enterprise authentication. - There is also a new option to directly - configure wpa_supplicant and to - connect to hidden networks. - - - - - In the module the - following options have been removed: - - - - - - - - - - - - - - - - - - - - - - - - - - - - To assign static addresses to an interface the options - and should - be used instead. The options and - have been renamed to - respectively. The new options - and have been - added to set up static routing. - - - - - The option is now - 127.0.0.1 by default. Previously the default behaviour - was to listen on all interfaces. - - - - - services.btrfs.autoScrub has been added, to - periodically check btrfs filesystems for data corruption. If there's a - correct copy available, it will automatically repair corrupted blocks. - - - - - displayManager.lightdm.greeters.gtk.clock-format. has - been added, the clock format string (as expected by strftime, e.g. - %H:%M) to use with the lightdm gtk greeter panel. - - - If set to null the default clock format is used. - - - - - displayManager.lightdm.greeters.gtk.indicators has been - added, a list of allowed indicator modules to use with the lightdm gtk - greeter panel. - - - Built-in indicators include ~a11y, - ~language, ~session, - ~power, ~clock, - ~host, ~spacer. Unity indicators can - be represented by short name (e.g. sound, - power), service file name, or absolute path. - - - If set to null the default indicators are used. - - - In order to have the previous default configuration add - - services.xserver.displayManager.lightdm.greeters.gtk.indicators = [ - "~host" "~spacer" - "~clock" "~spacer" - "~session" - "~language" - "~a11y" - "~power" - ]; - - to your configuration.nix. - - - - - The NixOS test driver supports user services declared by - systemd.user.services. The methods - waitForUnit, getUnitInfo, - startJob and stopJob provide an - optional $user argument for that purpose. - - - - - Enabling bash completion on NixOS, - programs.bash.enableCompletion, will now also enable - completion for the Nix command line tools by installing the - nix-bash-completions - package. - - - -
-
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1809.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1809.section.md new file mode 100644 index 0000000000..3443db37c9 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1809.section.md @@ -0,0 +1,332 @@ +# Release 18.09 ("Jellyfish", 2018/10/05) {#sec-release-18.09} + +## Highlights {#sec-release-18.09-highlights} + +In addition to numerous new and upgraded packages, this release has the following notable updates: + +- End of support is planned for end of April 2019, handing over to 19.03. + +- Platform support: x86_64-linux and x86_64-darwin as always. Support for aarch64-linux is as with the previous releases, not equivalent to the x86-64-linux release, but with efforts to reach parity. + +- Nix has been updated to 2.1; see its [release notes](https://nixos.org/nix/manual/#ssec-relnotes-2.1). + +- Core versions: linux: 4.14 LTS (unchanged), glibc: 2.26 → 2.27, gcc: 7 (unchanged), systemd: 237 → 239. + +- Desktop version changes: gnome: 3.26 → 3.28, (KDE) plasma-desktop: 5.12 → 5.13. + +Notable changes and additions for 18.09 include: + +- Support for wrapping binaries using `firejail` has been added through `programs.firejail.wrappedBinaries`. + + For example + + ```nix + { + programs.firejail = { + enable = true; + wrappedBinaries = { + firefox = "${lib.getBin pkgs.firefox}/bin/firefox"; + mpv = "${lib.getBin pkgs.mpv}/bin/mpv"; + }; + }; + } + ``` + + This will place `firefox` and `mpv` binaries in the global path wrapped by firejail. + +- User channels are now in the default `NIX_PATH`, allowing users to use their personal `nix-channel` defined channels in `nix-build` and `nix-shell` commands, as well as in imports like `import `. + + For example + + ```ShellSession + $ nix-channel --add https://nixos.org/channels/nixpkgs-unstable nixpkgsunstable + $ nix-channel --update + $ nix-build '' -A gitFull + $ nix run -f '' gitFull + $ nix-instantiate -E '(import {}).gitFull' + ``` + +## New Services {#sec-release-18.09-new-services} + +A curated selection of new services that were added since the last release: + +- The `services.cassandra` module has been reworked and was rewritten from scratch. The service has succeeding tests for the versions 2.1, 2.2, 3.0 and 3.11 of [Apache Cassandra](https://cassandra.apache.org/). + +- There is a new `services.foundationdb` module for deploying [FoundationDB](https://www.foundationdb.org) clusters. + +- When enabled the `iproute2` will copy the files expected by ip route (e.g., `rt_tables`) in `/etc/iproute2`. This allows to write aliases for routing tables for instance. + +- `services.strongswan-swanctl` is a modern replacement for `services.strongswan`. You can use either one of them to setup IPsec VPNs but not both at the same time. + + `services.strongswan-swanctl` uses the [swanctl](https://wiki.strongswan.org/projects/strongswan/wiki/swanctl) command which uses the modern [vici](https://github.com/strongswan/strongswan/blob/master/src/libcharon/plugins/vici/README.md) _Versatile IKE Configuration Interface_. The deprecated `ipsec` command used in `services.strongswan` is using the legacy [stroke configuration interface](https://github.com/strongswan/strongswan/blob/master/README_LEGACY.md). + +- The new `services.elasticsearch-curator` service periodically curates or manages, your Elasticsearch indices and snapshots. + +Every new services: + +- `./config/xdg/autostart.nix` + +- `./config/xdg/icons.nix` + +- `./config/xdg/menus.nix` + +- `./config/xdg/mime.nix` + +- `./hardware/brightnessctl.nix` + +- `./hardware/onlykey.nix` + +- `./hardware/video/uvcvideo/default.nix` + +- `./misc/documentation.nix` + +- `./programs/firejail.nix` + +- `./programs/iftop.nix` + +- `./programs/sedutil.nix` + +- `./programs/singularity.nix` + +- `./programs/xss-lock.nix` + +- `./programs/zsh/zsh-autosuggestions.nix` + +- `./services/admin/oxidized.nix` + +- `./services/backup/duplicati.nix` + +- `./services/backup/restic.nix` + +- `./services/backup/restic-rest-server.nix` + +- `./services/cluster/hadoop/default.nix` + +- `./services/databases/aerospike.nix` + +- `./services/databases/monetdb.nix` + +- `./services/desktops/bamf.nix` + +- `./services/desktops/flatpak.nix` + +- `./services/desktops/zeitgeist.nix` + +- `./services/development/bloop.nix` + +- `./services/development/jupyter/default.nix` + +- `./services/hardware/lcd.nix` + +- `./services/hardware/undervolt.nix` + +- `./services/misc/clipmenu.nix` + +- `./services/misc/gitweb.nix` + +- `./services/misc/serviio.nix` + +- `./services/misc/safeeyes.nix` + +- `./services/misc/sysprof.nix` + +- `./services/misc/weechat.nix` + +- `./services/monitoring/datadog-agent.nix` + +- `./services/monitoring/incron.nix` + +- `./services/networking/dnsdist.nix` + +- `./services/networking/freeradius.nix` + +- `./services/networking/hans.nix` + +- `./services/networking/morty.nix` + +- `./services/networking/ndppd.nix` + +- `./services/networking/ocserv.nix` + +- `./services/networking/owamp.nix` + +- `./services/networking/quagga.nix` + +- `./services/networking/shadowsocks.nix` + +- `./services/networking/stubby.nix` + +- `./services/networking/zeronet.nix` + +- `./services/security/certmgr.nix` + +- `./services/security/cfssl.nix` + +- `./services/security/oauth2_proxy_nginx.nix` + +- `./services/web-apps/virtlyst.nix` + +- `./services/web-apps/youtrack.nix` + +- `./services/web-servers/hitch/default.nix` + +- `./services/web-servers/hydron.nix` + +- `./services/web-servers/meguca.nix` + +- `./services/web-servers/nginx/gitweb.nix` + +- `./virtualisation/kvmgt.nix` + +- `./virtualisation/qemu-guest-agent.nix` + +## Backward Incompatibilities {#sec-release-18.09-incompatibilities} + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- Some licenses that were incorrectly not marked as unfree now are. This is the case for: + + - cc-by-nc-sa-20: Creative Commons Attribution Non Commercial Share Alike 2.0 + + - cc-by-nc-sa-25: Creative Commons Attribution Non Commercial Share Alike 2.5 + + - cc-by-nc-sa-30: Creative Commons Attribution Non Commercial Share Alike 3.0 + + - cc-by-nc-sa-40: Creative Commons Attribution Non Commercial Share Alike 4.0 + + - cc-by-nd-30: Creative Commons Attribution-No Derivative Works v3.00 + + - msrla: Microsoft Research License Agreement + +- The deprecated `services.cassandra` module has seen a complete rewrite. (See above.) + +- `lib.strict` is removed. Use `builtins.seq` instead. + +- The `clementine` package points now to the free derivation. `clementineFree` is removed now and `clementineUnfree` points to the package which is bundled with the unfree `libspotify` package. + +- The `netcat` package is now taken directly from OpenBSD\'s `libressl`, instead of relying on Debian\'s fork. The new version should be very close to the old version, but there are some minor differences. Importantly, flags like -b, -q, -C, and -Z are no longer accepted by the nc command. + +- The `services.docker-registry.extraConfig` object doesn\'t contain environment variables anymore. Instead it needs to provide an object structure that can be mapped onto the YAML configuration defined in [the `docker/distribution` docs](https://github.com/docker/distribution/blob/v2.6.2/docs/configuration.md). + +- `gnucash` has changed from version 2.4 to 3.x. If you\'ve been using `gnucash` (version 2.4) instead of `gnucash26` (version 2.6) you must open your Gnucash data file(s) with `gnucash26` and then save them to upgrade the file format. Then you may use your data file(s) with Gnucash 3.x. See the upgrade [documentation](https://wiki.gnucash.org/wiki/FAQ#Using_Different_Versions.2C_Up_And_Downgrade). Gnucash 2.4 is still available under the attribute `gnucash24`. + +- `services.munge` now runs as user (and group) `munge` instead of root. Make sure the key file is accessible to the daemon. + +- `dockerTools.buildImage` now uses `null` as default value for `tag`, which indicates that the nix output hash will be used as tag. + +- The ELK stack: `elasticsearch`, `logstash` and `kibana` has been upgraded from 2.\* to 6.3.\*. The 2.\* versions have been [unsupported since last year](https://www.elastic.co/support/eol) so they have been removed. You can still use the 5.\* versions under the names `elasticsearch5`, `logstash5` and `kibana5`. + + The elastic beats: `filebeat`, `heartbeat`, `metricbeat` and `packetbeat` have had the same treatment: they now target 6.3.\* as well. The 5.\* versions are available under the names: `filebeat5`, `heartbeat5`, `metricbeat5` and `packetbeat5` + + The ELK-6.3 stack now comes with [X-Pack by default](https://www.elastic.co/products/x-pack/open). Since X-Pack is licensed under the [Elastic License](https://github.com/elastic/elasticsearch/blob/master/licenses/ELASTIC-LICENSE.txt) the ELK packages now have an unfree license. To use them you need to specify `allowUnfree = true;` in your nixpkgs configuration. + + Fortunately there is also a free variant of the ELK stack without X-Pack. The packages are available under the names: `elasticsearch-oss`, `logstash-oss` and `kibana-oss`. + +- Options `boot.initrd.luks.devices.name.yubikey.ramfsMountPoint` `boot.initrd.luks.devices.name.yubikey.storage.mountPoint` were removed. `luksroot.nix` module never supported more than one YubiKey at a time anyway, hence those options never had any effect. You should be able to remove them from your config without any issues. + +- `stdenv.system` and `system` in nixpkgs now refer to the host platform instead of the build platform. For native builds this is not change, let alone a breaking one. For cross builds, it is a breaking change, and `stdenv.buildPlatform.system` can be used instead for the old behavior. They should be using that anyways for clarity. + +- Groups `kvm` and `render` are introduced now, as systemd requires them. + +## Other Notable Changes {#sec-release-18.09-notable-changes} + +- `dockerTools.pullImage` relies on image digest instead of image tag to download the image. The `sha256` of a pulled image has to be updated. + +- `lib.attrNamesToStr` has been deprecated. Use more specific concatenation (`lib.concat(Map)StringsSep`) instead. + +- `lib.addErrorContextToAttrs` has been deprecated. Use `builtins.addErrorContext` directly. + +- `lib.showVal` has been deprecated. Use `lib.traceSeqN` instead. + +- `lib.traceXMLVal` has been deprecated. Use `lib.traceValFn builtins.toXml` instead. + +- `lib.traceXMLValMarked` has been deprecated. Use `lib.traceValFn (x: str + builtins.toXML x)` instead. + +- The `pkgs` argument to NixOS modules can now be set directly using `nixpkgs.pkgs`. Previously, only the `system`, `config` and `overlays` arguments could be used to influence `pkgs`. + +- A NixOS system can now be constructed more easily based on a preexisting invocation of Nixpkgs. For example: + + ```nix + { + inherit (pkgs.nixos { + boot.loader.grub.enable = false; + fileSystems."/".device = "/dev/xvda1"; + }) toplevel kernel initialRamdisk manual; + } + ``` + + This benefits evaluation performance, lets you write Nixpkgs packages that depend on NixOS images and is consistent with a deployment architecture that would be centered around Nixpkgs overlays. + +- `lib.traceValIfNot` has been deprecated. Use `if/then/else` and `lib.traceValSeq` instead. + +- `lib.traceCallXml` has been deprecated. Please complain if you use the function regularly. + +- The attribute `lib.nixpkgsVersion` has been deprecated in favor of `lib.version`. Please refer to the discussion in [NixOS/nixpkgs\#39416](https://github.com/NixOS/nixpkgs/pull/39416#discussion_r183845745) for further reference. + +- `lib.recursiveUpdateUntil` was not acting according to its specification. It has been fixed to act according to the docstring, and a test has been added. + +- The module for `security.dhparams` has two new options now: + + `security.dhparams.stateless` + + : Puts the generated Diffie-Hellman parameters into the Nix store instead of managing them in a stateful manner in `/var/lib/dhparams`. + + `security.dhparams.defaultBitSize` + + : The default bit size to use for the generated Diffie-Hellman parameters. + + ::: {.note} + The path to the actual generated parameter files should now be queried using `config.security.dhparams.params.name.path` because it might be either in the Nix store or in a directory configured by `security.dhparams.path`. + ::: + + ::: {.note} + **For developers:** + + Module implementers should not set a specific bit size in order to let users configure it by themselves if they want to have a different bit size than the default (2048). + + An example usage of this would be: + + ```nix + { config, ... }: + + { + security.dhparams.params.myservice = {}; + environment.etc."myservice.conf".text = '' + dhparams = ${config.security.dhparams.params.myservice.path} + ''; + } + ``` + + ::: + +- `networking.networkmanager.useDnsmasq` has been deprecated. Use `networking.networkmanager.dns` instead. + +- The Kubernetes package has been bumped to major version 1.11. Please consult the [release notes](https://github.com/kubernetes/kubernetes/blob/release-1.11/CHANGELOG-1.11.md) for details on new features and api changes. + +- The option `services.kubernetes.apiserver.admissionControl` was renamed to `services.kubernetes.apiserver.enableAdmissionPlugins`. + +- Recommended way to access the Kubernetes Dashboard is via HTTPS (TLS) Therefore; public service port for the dashboard has changed to 443 (container port 8443) and scheme to https. + +- The option `services.kubernetes.apiserver.address` was renamed to `services.kubernetes.apiserver.bindAddress`. Note that the default value has changed from 127.0.0.1 to 0.0.0.0. + +- The option `services.kubernetes.apiserver.publicAddress` was not used and thus has been removed. + +- The option `services.kubernetes.addons.dashboard.enableRBAC` was renamed to `services.kubernetes.addons.dashboard.rbac.enable`. + +- The Kubernetes Dashboard now has only minimal RBAC permissions by default. If dashboard cluster-admin rights are desired, set `services.kubernetes.addons.dashboard.rbac.clusterAdmin` to true. On existing clusters, in order for the revocation of privileges to take effect, the current ClusterRoleBinding for kubernetes-dashboard must be manually removed: `kubectl delete clusterrolebinding kubernetes-dashboard` + +- The `programs.screen` module provides allows to configure `/etc/screenrc`, however the module behaved fairly counterintuitive as the config exists, but the package wasn\'t available. Since 18.09 `pkgs.screen` will be added to `environment.systemPackages`. + +- The module `services.networking.hostapd` now uses WPA2 by default. + +- `s6Dns`, `s6Networking`, `s6LinuxUtils` and `s6PortableUtils` renamed to `s6-dns`, `s6-networking`, `s6-linux-utils` and `s6-portable-utils` respectively. + +- The module option `nix.useSandbox` is now defaulted to `true`. + +- The config activation script of `nixos-rebuild` now [reloads](https://www.freedesktop.org/software/systemd/man/systemctl.html#Manager%20Lifecycle%20Commands) all user units for each authenticated user. + +- The default display manager is now LightDM. To use SLiM set `services.xserver.displayManager.slim.enable` to `true`. + +- NixOS option descriptions are now automatically broken up into individual paragraphs if the text contains two consecutive newlines, so it\'s no longer necessary to use `` to start a new paragraph. + +- Top-level `buildPlatform`, `hostPlatform`, and `targetPlatform` in Nixpkgs are deprecated. Please use their equivalents in `stdenv` instead: `stdenv.buildPlatform`, `stdenv.hostPlatform`, and `stdenv.targetPlatform`. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1809.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1809.xml deleted file mode 100644 index 3f10b26223..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1809.xml +++ /dev/null @@ -1,933 +0,0 @@ -
- Release 18.09 (“Jellyfish”, 2018/10/05) - -
- Highlights - - - In addition to numerous new and upgraded packages, this release has the - following notable updates: - - - - - - End of support is planned for end of April 2019, handing over to 19.03. - - - - - Platform support: x86_64-linux and x86_64-darwin as always. Support for - aarch64-linux is as with the previous releases, not equivalent to the - x86-64-linux release, but with efforts to reach parity. - - - - - Nix has been updated to 2.1; see its - release - notes. - - - - - Core versions: linux: 4.14 LTS (unchanged), glibc: 2.26 → 2.27, gcc: 7 - (unchanged), systemd: 237 → 239. - - - - - Desktop version changes: gnome: 3.26 → 3.28, (KDE) plasma-desktop: 5.12 - → 5.13. - - - - - - Notable changes and additions for 18.09 include: - - - - - - Support for wrapping binaries using firejail has been - added through programs.firejail.wrappedBinaries. - - - For example - - -programs.firejail = { - enable = true; - wrappedBinaries = { - firefox = "${lib.getBin pkgs.firefox}/bin/firefox"; - mpv = "${lib.getBin pkgs.mpv}/bin/mpv"; - }; -}; - - - This will place firefox and mpv - binaries in the global path wrapped by firejail. - - - - - User channels are now in the default NIX_PATH, allowing - users to use their personal nix-channel defined - channels in nix-build and nix-shell - commands, as well as in imports like import - <mychannel>. - - - For example - - -$ nix-channel --add https://nixos.org/channels/nixpkgs-unstable nixpkgsunstable -$ nix-channel --update -$ nix-build '<nixpkgsunstable>' -A gitFull -$ nix run -f '<nixpkgsunstable>' gitFull -$ nix-instantiate -E '(import <nixpkgsunstable> {}).gitFull' - - - -
- -
- New Services - - - A curated selection of new services that were added since the last release: - - - - - - The services.cassandra module has been reworked and was - rewritten from scratch. The service has succeeding tests for the versions - 2.1, 2.2, 3.0 and 3.11 of - Apache - Cassandra. - - - - - There is a new services.foundationdb module for - deploying - FoundationDB - clusters. - - - - - When enabled the iproute2 will copy the files expected - by ip route (e.g., rt_tables) in - /etc/iproute2. This allows to write aliases for - routing tables for instance. - - - - - services.strongswan-swanctl is a modern replacement for - services.strongswan. You can use either one of them to - setup IPsec VPNs but not both at the same time. - - - services.strongswan-swanctl uses the - swanctl - command which uses the modern - vici - Versatile IKE Configuration Interface. The deprecated - ipsec command used in - services.strongswan is using the legacy - stroke - configuration interface. - - - - - The new services.elasticsearch-curator service - periodically curates or manages, your Elasticsearch indices and snapshots. - - - - - - Every new services: - - - - - - ./config/xdg/autostart.nix - - - - - ./config/xdg/icons.nix - - - - - ./config/xdg/menus.nix - - - - - ./config/xdg/mime.nix - - - - - ./hardware/brightnessctl.nix - - - - - ./hardware/onlykey.nix - - - - - ./hardware/video/uvcvideo/default.nix - - - - - ./misc/documentation.nix - - - - - ./programs/firejail.nix - - - - - ./programs/iftop.nix - - - - - ./programs/sedutil.nix - - - - - ./programs/singularity.nix - - - - - ./programs/xss-lock.nix - - - - - ./programs/zsh/zsh-autosuggestions.nix - - - - - ./services/admin/oxidized.nix - - - - - ./services/backup/duplicati.nix - - - - - ./services/backup/restic.nix - - - - - ./services/backup/restic-rest-server.nix - - - - - ./services/cluster/hadoop/default.nix - - - - - ./services/databases/aerospike.nix - - - - - ./services/databases/monetdb.nix - - - - - ./services/desktops/bamf.nix - - - - - ./services/desktops/flatpak.nix - - - - - ./services/desktops/zeitgeist.nix - - - - - ./services/development/bloop.nix - - - - - ./services/development/jupyter/default.nix - - - - - ./services/hardware/lcd.nix - - - - - ./services/hardware/undervolt.nix - - - - - ./services/misc/clipmenu.nix - - - - - ./services/misc/gitweb.nix - - - - - ./services/misc/serviio.nix - - - - - ./services/misc/safeeyes.nix - - - - - ./services/misc/sysprof.nix - - - - - ./services/misc/weechat.nix - - - - - ./services/monitoring/datadog-agent.nix - - - - - ./services/monitoring/incron.nix - - - - - ./services/networking/dnsdist.nix - - - - - ./services/networking/freeradius.nix - - - - - ./services/networking/hans.nix - - - - - ./services/networking/morty.nix - - - - - ./services/networking/ndppd.nix - - - - - ./services/networking/ocserv.nix - - - - - ./services/networking/owamp.nix - - - - - ./services/networking/quagga.nix - - - - - ./services/networking/shadowsocks.nix - - - - - ./services/networking/stubby.nix - - - - - ./services/networking/zeronet.nix - - - - - ./services/security/certmgr.nix - - - - - ./services/security/cfssl.nix - - - - - ./services/security/oauth2_proxy_nginx.nix - - - - - ./services/web-apps/virtlyst.nix - - - - - ./services/web-apps/youtrack.nix - - - - - ./services/web-servers/hitch/default.nix - - - - - ./services/web-servers/hydron.nix - - - - - ./services/web-servers/meguca.nix - - - - - ./services/web-servers/nginx/gitweb.nix - - - - - ./virtualisation/kvmgt.nix - - - - - ./virtualisation/qemu-guest-agent.nix - - - -
- -
- Backward Incompatibilities - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - - Some licenses that were incorrectly not marked as unfree now are. This is - the case for: - - - - cc-by-nc-sa-20: Creative Commons Attribution Non Commercial Share Alike - 2.0 - - - - - cc-by-nc-sa-25: Creative Commons Attribution Non Commercial Share Alike - 2.5 - - - - - cc-by-nc-sa-30: Creative Commons Attribution Non Commercial Share Alike - 3.0 - - - - - cc-by-nc-sa-40: Creative Commons Attribution Non Commercial Share Alike - 4.0 - - - - - cc-by-nd-30: Creative Commons Attribution-No Derivative Works v3.00 - - - - - msrla: Microsoft Research License Agreement - - - - - - - - The deprecated services.cassandra module has seen a - complete rewrite. (See above.) - - - - - lib.strict is removed. Use - builtins.seq instead. - - - - - The clementine package points now to the free - derivation. clementineFree is removed now and - clementineUnfree points to the package which is bundled - with the unfree libspotify package. - - - - - The netcat package is now taken directly from OpenBSD's - libressl, instead of relying on Debian's fork. The new - version should be very close to the old version, but there are some minor - differences. Importantly, flags like -b, -q, -C, and -Z are no longer - accepted by the nc command. - - - - - The services.docker-registry.extraConfig object doesn't - contain environment variables anymore. Instead it needs to provide an - object structure that can be mapped onto the YAML configuration defined in - the - docker/distribution docs. - - - - - gnucash has changed from version 2.4 to 3.x. If you've - been using gnucash (version 2.4) instead of - gnucash26 (version 2.6) you must open your Gnucash data - file(s) with gnucash26 and then save them to upgrade - the file format. Then you may use your data file(s) with Gnucash 3.x. See - the upgrade - documentation. - Gnucash 2.4 is still available under the attribute - gnucash24. - - - - - services.munge now runs as user (and group) - munge instead of root. Make sure the key file is - accessible to the daemon. - - - - - dockerTools.buildImage now uses null - as default value for tag, which indicates that the nix - output hash will be used as tag. - - - - - The ELK stack: elasticsearch, - logstash and kibana has been - upgraded from 2.* to 6.3.*. The 2.* versions have been - unsupported since - last year so they have been removed. You can still use the 5.* - versions under the names elasticsearch5, - logstash5 and kibana5. - - - The elastic beats: filebeat, - heartbeat, metricbeat and - packetbeat have had the same treatment: they now target - 6.3.* as well. The 5.* versions are available under the names: - filebeat5, heartbeat5, - metricbeat5 and packetbeat5 - - - The ELK-6.3 stack now comes with - X-Pack by - default. Since X-Pack is licensed under the - Elastic - License the ELK packages now have an unfree license. To use them - you need to specify allowUnfree = true; in your nixpkgs - configuration. - - - Fortunately there is also a free variant of the ELK stack without X-Pack. - The packages are available under the names: - elasticsearch-oss, logstash-oss and - kibana-oss. - - - - - Options - boot.initrd.luks.devices.name.yubikey.ramfsMountPoint - boot.initrd.luks.devices.name.yubikey.storage.mountPoint - were removed. luksroot.nix module never supported more - than one YubiKey at a time anyway, hence those options never had any - effect. You should be able to remove them from your config without any - issues. - - - - - stdenv.system and system in nixpkgs - now refer to the host platform instead of the build platform. For native - builds this is not change, let alone a breaking one. For cross builds, it - is a breaking change, and stdenv.buildPlatform.system - can be used instead for the old behavior. They should be using that - anyways for clarity. - - - - - Groups kvm and render are introduced - now, as systemd requires them. - - - -
- -
- Other Notable Changes - - - - - dockerTools.pullImage relies on image digest instead of - image tag to download the image. The sha256 of a pulled - image has to be updated. - - - - - lib.attrNamesToStr has been deprecated. Use more - specific concatenation (lib.concat(Map)StringsSep) - instead. - - - - - lib.addErrorContextToAttrs has been deprecated. Use - builtins.addErrorContext directly. - - - - - lib.showVal has been deprecated. Use - lib.traceSeqN instead. - - - - - lib.traceXMLVal has been deprecated. Use - lib.traceValFn builtins.toXml instead. - - - - - lib.traceXMLValMarked has been deprecated. Use - lib.traceValFn (x: str + builtins.toXML x) instead. - - - - - The pkgs argument to NixOS modules can now be set - directly using nixpkgs.pkgs. Previously, only the - system, config and - overlays arguments could be used to influence - pkgs. - - - - - A NixOS system can now be constructed more easily based on a preexisting - invocation of Nixpkgs. For example: - -inherit (pkgs.nixos { - boot.loader.grub.enable = false; - fileSystems."/".device = "/dev/xvda1"; -}) toplevel kernel initialRamdisk manual; - - This benefits evaluation performance, lets you write Nixpkgs packages that - depend on NixOS images and is consistent with a deployment architecture - that would be centered around Nixpkgs overlays. - - - - - lib.traceValIfNot has been deprecated. Use - if/then/else and lib.traceValSeq - instead. - - - - - lib.traceCallXml has been deprecated. Please complain - if you use the function regularly. - - - - - The attribute lib.nixpkgsVersion has been deprecated in - favor of lib.version. Please refer to the discussion in - NixOS/nixpkgs#39416 - for further reference. - - - - - lib.recursiveUpdateUntil was not acting according to - its specification. It has been fixed to act according to the docstring, - and a test has been added. - - - - - The module for has two new options now: - - - - - - - - - Puts the generated Diffie-Hellman parameters into the Nix store instead - of managing them in a stateful manner in - /var/lib/dhparams. - - - - - - - - - - The default bit size to use for the generated Diffie-Hellman - parameters. - - - - - - - The path to the actual generated parameter files should now be queried - using - config.security.dhparams.params.name.path - because it might be either in the Nix store or in a directory configured - by . - - - - For developers: - - Module implementers should not set a specific bit size in order to let - users configure it by themselves if they want to have a different bit - size than the default (2048). - - - An example usage of this would be: - -{ config, ... }: - -{ - security.dhparams.params.myservice = {}; - environment.etc."myservice.conf".text = '' - dhparams = ${config.security.dhparams.params.myservice.path} - ''; -} - - - - - - - networking.networkmanager.useDnsmasq has been - deprecated. Use networking.networkmanager.dns instead. - - - - - The Kubernetes package has been bumped to major version 1.11. Please - consult the - release - notes for details on new features and api changes. - - - - - The option - services.kubernetes.apiserver.admissionControl was - renamed to - services.kubernetes.apiserver.enableAdmissionPlugins. - - - - - Recommended way to access the Kubernetes Dashboard is via HTTPS (TLS) - Therefore; public service port for the dashboard has changed to 443 - (container port 8443) and scheme to https. - - - - - The option services.kubernetes.apiserver.address was - renamed to services.kubernetes.apiserver.bindAddress. - Note that the default value has changed from 127.0.0.1 to 0.0.0.0. - - - - - The option services.kubernetes.apiserver.publicAddress - was not used and thus has been removed. - - - - - The option - services.kubernetes.addons.dashboard.enableRBAC was - renamed to - services.kubernetes.addons.dashboard.rbac.enable. - - - - - The Kubernetes Dashboard now has only minimal RBAC permissions by default. - If dashboard cluster-admin rights are desired, set - services.kubernetes.addons.dashboard.rbac.clusterAdmin - to true. On existing clusters, in order for the revocation of privileges - to take effect, the current ClusterRoleBinding for kubernetes-dashboard - must be manually removed: kubectl delete clusterrolebinding - kubernetes-dashboard - - - - - The programs.screen module provides allows to configure - /etc/screenrc, however the module behaved fairly - counterintuitive as the config exists, but the package wasn't available. - Since 18.09 pkgs.screen will be added to - environment.systemPackages. - - - - - The module now uses WPA2 by - default. - - - - - s6Dns, s6Networking, - s6LinuxUtils and s6PortableUtils - renamed to s6-dns, s6-networking, - s6-linux-utils and s6-portable-utils - respectively. - - - - - The module option is now defaulted to - true. - - - - - The config activation script of nixos-rebuild now - reloads - all user units for each authenticated user. - - - - - The default display manager is now LightDM. To use SLiM set - services.xserver.displayManager.slim.enable to - true. - - - - - NixOS option descriptions are now automatically broken up into individual - paragraphs if the text contains two consecutive newlines, so it's no - longer necessary to use </para><para> to start a - new paragraph. - - - - - Top-level buildPlatform, - hostPlatform, and targetPlatform in - Nixpkgs are deprecated. Please use their equivalents in - stdenv instead: - stdenv.buildPlatform, - stdenv.hostPlatform, and - stdenv.targetPlatform. - - - -
-
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1903.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1903.section.md new file mode 100644 index 0000000000..7637a70c1b --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1903.section.md @@ -0,0 +1,214 @@ +# Release 19.03 ("Koi", 2019/04/11) {#sec-release-19.03} + +## Highlights {#sec-release-19.03-highlights} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- End of support is planned for end of October 2019, handing over to 19.09. + +- The default Python 3 interpreter is now CPython 3.7 instead of CPython 3.6. + +- Added the Pantheon desktop environment. It can be enabled through `services.xserver.desktopManager.pantheon.enable`. + + ::: {.note} + By default, `services.xserver.desktopManager.pantheon` enables LightDM as a display manager, as pantheon\'s screen locking implementation relies on it. + Because of that it is recommended to leave LightDM enabled. If you\'d like to disable it anyway, set `services.xserver.displayManager.lightdm.enable` to `false` and enable your preferred display manager. + ::: + + Also note that Pantheon\'s LightDM greeter is not enabled by default, because it has numerous issues in NixOS and isn\'t optimal for use here yet. + +- A major refactoring of the Kubernetes module has been completed. Refactorings primarily focus on decoupling components and enhancing security. Two-way TLS and RBAC has been enabled by default for all components, which slightly changes the way the module is configured. See: [](#sec-kubernetes) for details. + +- There is now a set of `confinement` options for `systemd.services`, which allows to restrict services into a chroot 2 ed environment that only contains the store paths from the runtime closure of the service. + +## New Services {#sec-release-19.03-new-services} + +The following new services were added since the last release: + +- `./programs/nm-applet.nix` + +- There is a new `security.googleOsLogin` module for using [OS Login](https://cloud.google.com/compute/docs/instances/managing-instance-access) to manage SSH access to Google Compute Engine instances, which supersedes the imperative and broken `google-accounts-daemon` used in `nixos/modules/virtualisation/google-compute-config.nix`. + +- `./services/misc/beanstalkd.nix` + +- There is a new `services.cockroachdb` module for running CockroachDB databases. NixOS now ships with CockroachDB 2.1.x as well, available on `x86_64-linux` and `aarch64-linux`. + +- `./security/duosec.nix` + +- The [PAM module for Duo Security](https://duo.com/docs/duounix) has been enabled for use. One can configure it using the `security.duosec` options along with the corresponding PAM option in `security.pam.services..duoSecurity.enable`. + +## Backward Incompatibilities {#sec-release-19.03-incompatibilities} + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- The minimum version of Nix required to evaluate Nixpkgs is now 2.0. + + - For users of NixOS 18.03 and 19.03, NixOS defaults to Nix 2.0, but supports using Nix 1.11 by setting `nix.package = pkgs.nix1;`. If this option is set to a Nix 1.11 package, you will need to either unset the option or upgrade it to Nix 2.0. + + - For users of NixOS 17.09, you will first need to upgrade Nix by setting `nix.package = pkgs.nixStable2;` and run `nixos-rebuild switch` as the `root` user. + + - For users of a daemon-less Nix installation on Linux or macOS, you can upgrade Nix by running `curl -L https://nixos.org/nix/install | sh`, or prior to doing a channel update, running `nix-env -iA nix`. If you have already run a channel update and Nix is no longer able to evaluate Nixpkgs, the error message printed should provide adequate directions for upgrading Nix. + + - For users of the Nix daemon on macOS, you can upgrade Nix by running `sudo -i sh -c 'nix-channel --update && nix-env -iA nixpkgs.nix'; sudo launchctl stop org.nixos.nix-daemon; sudo launchctl start org.nixos.nix-daemon`. + +- The `buildPythonPackage` function now sets `strictDeps = true` to help distinguish between native and non-native dependencies in order to improve cross-compilation compatibility. Note however that this may break user expressions. + +- The `buildPythonPackage` function now sets `LANG = C.UTF-8` to enable Unicode support. The `glibcLocales` package is no longer needed as a build input. + +- The Syncthing state and configuration data has been moved from `services.syncthing.dataDir` to the newly defined `services.syncthing.configDir`, which default to `/var/lib/syncthing/.config/syncthing`. This change makes possible to share synced directories using ACLs without Syncthing resetting the permission on every start. + +- The `ntp` module now has sane default restrictions. If you\'re relying on the previous defaults, which permitted all queries and commands from all firewall-permitted sources, you can set `services.ntp.restrictDefault` and `services.ntp.restrictSource` to `[]`. + +- Package `rabbitmq_server` is renamed to `rabbitmq-server`. + +- The `light` module no longer uses setuid binaries, but udev rules. As a consequence users of that module have to belong to the `video` group in order to use the executable (i.e. `users.users.yourusername.extraGroups = ["video"];`). + +- Buildbot now supports Python 3 and its packages have been moved to `pythonPackages`. The options `services.buildbot-master.package` and `services.buildbot-worker.package` can be used to select the Python 2 or 3 version of the package. + +- Options `services.znc.confOptions.networks.name.userName` and `services.znc.confOptions.networks.name.modulePackages` were removed. They were never used for anything and can therefore safely be removed. + +- Package `wasm` has been renamed `proglodyte-wasm`. The package `wasm` will be pointed to `ocamlPackages.wasm` in 19.09, so make sure to update your configuration if you want to keep `proglodyte-wasm` + +- When the `nixpkgs.pkgs` option is set, NixOS will no longer ignore the `nixpkgs.overlays` option. The old behavior can be recovered by setting `nixpkgs.overlays = lib.mkForce [];`. + +- OpenSMTPD has been upgraded to version 6.4.0p1. This release makes backwards-incompatible changes to the configuration file format. See `man smtpd.conf` for more information on the new file format. + +- The versioned `postgresql` have been renamed to use underscore number seperators. For example, `postgresql96` has been renamed to `postgresql_9_6`. + +- Package `consul-ui` and passthrough `consul.ui` have been removed. The package `consul` now uses upstream releases that vendor the UI into the binary. See [\#48714](https://github.com/NixOS/nixpkgs/pull/48714#issuecomment-433454834) for details. + +- Slurm introduces the new option `services.slurm.stateSaveLocation`, which is now set to `/var/spool/slurm` by default (instead of `/var/spool`). Make sure to move all files to the new directory or to set the option accordingly. + + The slurmctld now runs as user `slurm` instead of `root`. If you want to keep slurmctld running as `root`, set `services.slurm.user = root`. + + The options `services.slurm.nodeName` and `services.slurm.partitionName` are now sets of strings to correctly reflect that fact that each of these options can occour more than once in the configuration. + +- The `solr` package has been upgraded from 4.10.3 to 7.5.0 and has undergone some major changes. The `services.solr` module has been updated to reflect these changes. Please review http://lucene.apache.org/solr/ carefully before upgrading. + +- Package `ckb` is renamed to `ckb-next`, and options `hardware.ckb.*` are renamed to `hardware.ckb-next.*`. + +- The option `services.xserver.displayManager.job.logToFile` which was previously set to `true` when using the display managers `lightdm`, `sddm` or `xpra` has been reset to the default value (`false`). + +- Network interface indiscriminate NixOS firewall options (`networking.firewall.allow*`) are now preserved when also setting interface specific rules such as `networking.firewall.interfaces.en0.allow*`. These rules continue to use the pseudo device \"default\" (`networking.firewall.interfaces.default.*`), and assigning to this pseudo device will override the (`networking.firewall.allow*`) options. + +- The `nscd` service now disables all caching of `passwd` and `group` databases by default. This was interferring with the correct functioning of the `libnss_systemd.so` module which is used by `systemd` to manage uids and usernames in the presence of `DynamicUser=` in systemd services. This was already the default behaviour in presence of `services.sssd.enable = true` because nscd caching would interfere with `sssd` in unpredictable ways as well. Because we\'re using nscd not for caching, but for convincing glibc to find NSS modules in the nix store instead of an absolute path, we have decided to disable caching globally now, as it\'s usually not the behaviour the user wants and can lead to surprising behaviour. Furthermore, negative caching of host lookups is also disabled now by default. This should fix the issue of dns lookups failing in the presence of an unreliable network. + + If the old behaviour is desired, this can be restored by setting the `services.nscd.config` option with the desired caching parameters. + + ```nix + { + services.nscd.config = + '' + server-user nscd + threads 1 + paranoia no + debug-level 0 + + enable-cache passwd yes + positive-time-to-live passwd 600 + negative-time-to-live passwd 20 + suggested-size passwd 211 + check-files passwd yes + persistent passwd no + shared passwd yes + + enable-cache group yes + positive-time-to-live group 3600 + negative-time-to-live group 60 + suggested-size group 211 + check-files group yes + persistent group no + shared group yes + + enable-cache hosts yes + positive-time-to-live hosts 600 + negative-time-to-live hosts 5 + suggested-size hosts 211 + check-files hosts yes + persistent hosts no + shared hosts yes + ''; + } + ``` + + See [\#50316](https://github.com/NixOS/nixpkgs/pull/50316) for details. + +- GitLab Shell previously used the nix store paths for the `gitlab-shell` command in its `authorized_keys` file, which might stop working after garbage collection. To circumvent that, we regenerated that file on each startup. As `gitlab-shell` has now been changed to use `/var/run/current-system/sw/bin/gitlab-shell`, this is not necessary anymore, but there might be leftover lines with a nix store path. Regenerate the `authorized_keys` file via `sudo -u git -H gitlab-rake gitlab:shell:setup` in that case. + +- The `pam_unix` account module is now loaded with its control field set to `required` instead of `sufficient`, so that later PAM account modules that might do more extensive checks are being executed. Previously, the whole account module verification was exited prematurely in case a nss module provided the account name to `pam_unix`. The LDAP and SSSD NixOS modules already add their NSS modules when enabled. In case your setup breaks due to some later PAM account module previosuly shadowed, or failing NSS lookups, please file a bug. You can get back the old behaviour by manually setting `security.pam.services..text`. + +- The `pam_unix` password module is now loaded with its control field set to `sufficient` instead of `required`, so that password managed only by later PAM password modules are being executed. Previously, for example, changing an LDAP account\'s password through PAM was not possible: the whole password module verification was exited prematurely by `pam_unix`, preventing `pam_ldap` to manage the password as it should. + +- `fish` has been upgraded to 3.0. It comes with a number of improvements and backwards incompatible changes. See the `fish` [release notes](https://github.com/fish-shell/fish-shell/releases/tag/3.0.0) for more information. + +- The ibus-table input method has had a change in config format, which causes all previous settings to be lost. See [this commit message](https://github.com/mike-fabian/ibus-table/commit/f9195f877c5212fef0dfa446acb328c45ba5852b) for details. + +- NixOS module system type `types.optionSet` and `lib.mkOption` argument `options` are deprecated. Use `types.submodule` instead. ([\#54637](https://github.com/NixOS/nixpkgs/pull/54637)) + +- `matrix-synapse` has been updated to version 0.99. It will [no longer generate a self-signed certificate on first launch](https://github.com/matrix-org/synapse/pull/4509) and will be [the last version to accept self-signed certificates](https://matrix.org/blog/2019/02/05/synapse-0-99-0/). As such, it is now recommended to use a proper certificate verified by a root CA (for example Let\'s Encrypt). The new [manual chapter on Matrix](#module-services-matrix) contains a working example of using nginx as a reverse proxy in front of `matrix-synapse`, using Let\'s Encrypt certificates. + +- `mailutils` now works by default when `sendmail` is not in a setuid wrapper. As a consequence, the `sendmailPath` argument, having lost its main use, has been removed. + +- `graylog` has been upgraded from version 2.\* to 3.\*. Some setups making use of extraConfig (especially those exposing Graylog via reverse proxies) need to be updated as upstream removed/replaced some settings. See [Upgrading Graylog](http://docs.graylog.org/en/3.0/pages/upgrade/graylog-3.0.html#simplified-http-interface-configuration) for details. + +- The option `users.ldap.bind.password` was renamed to `users.ldap.bind.passwordFile`, and needs to be readable by the `nslcd` user. Same applies to the new `users.ldap.daemon.rootpwmodpwFile` option. + +- `nodejs-6_x` is end-of-life. `nodejs-6_x`, `nodejs-slim-6_x` and `nodePackages_6_x` are removed. + +## Other Notable Changes {#sec-release-19.03-notable-changes} + +- The `services.matomo` module gained the option `services.matomo.package` which determines the used Matomo version. + + The Matomo module now also comes with the systemd service `matomo-archive-processing.service` and a timer that automatically triggers archive processing every hour. This means that you can safely [ disable browser triggers for Matomo archiving ](https://matomo.org/docs/setup-auto-archiving/#disable-browser-triggers-for-matomo-archiving-and-limit-matomo-reports-to-updating-every-hour) at `Administration > System > General Settings`. + + Additionally, you can enable to [ delete old visitor logs ](https://matomo.org/docs/privacy/#step-2-delete-old-visitors-logs) at `Administration > System > Privacy`, but make sure that you run `systemctl start matomo-archive-processing.service` at least once without errors if you have already collected data before, so that the reports get archived before the source data gets deleted. + +- `composableDerivation` along with supporting library functions has been removed. + +- The deprecated `truecrypt` package has been removed and `truecrypt` attribute is now an alias for `veracrypt`. VeraCrypt is backward-compatible with TrueCrypt volumes. Note that `cryptsetup` also supports loading TrueCrypt volumes. + +- The Kubernetes DNS addons, kube-dns, has been replaced with CoreDNS. This change is made in accordance with Kubernetes making CoreDNS the official default starting from [Kubernetes v1.11](https://github.com/kubernetes/kubernetes/blob/master/CHANGELOG-1.11.md#sig-cluster-lifecycle). Please beware that upgrading DNS-addon on existing clusters might induce minor downtime while the DNS-addon terminates and re-initializes. Also note that the DNS-service now runs with 2 pod replicas by default. The desired number of replicas can be configured using: `services.kubernetes.addons.dns.replicas`. + +- The quassel-webserver package and module was removed from nixpkgs due to the lack of maintainers. + +- The manual gained a [ new chapter on self-hosting `matrix-synapse` and `riot-web` ](#module-services-matrix), the most prevalent server and client implementations for the [Matrix](https://matrix.org/) federated communication network. + +- The astah-community package was removed from nixpkgs due to it being discontinued and the downloads not being available anymore. + +- The httpd service now saves log files with a .log file extension by default for easier integration with the logrotate service. + +- The owncloud server packages and httpd subservice module were removed from nixpkgs due to the lack of maintainers. + +- It is possible now to uze ZRAM devices as general purpose ephemeral block devices, not only as swap. Using more than 1 device as ZRAM swap is no longer recommended, but is still possible by setting `zramSwap.swapDevices` explicitly. + + ZRAM algorithm can be changed now. + + Changes to ZRAM algorithm are applied during `nixos-rebuild switch`, so make sure you have enough swap space on disk to survive ZRAM device rebuild. Alternatively, use `nixos-rebuild boot; reboot`. + +- Flat volumes are now disabled by default in `hardware.pulseaudio`. This has been done to prevent applications, which are unaware of this feature, setting their volumes to 100% on startup causing harm to your audio hardware and potentially your ears. + + ::: {.note} + With this change application specific volumes are relative to the master volume which can be adjusted independently, whereas before they were absolute; meaning that in effect, it scaled the device-volume with the volume of the loudest application. + ::: + +- The [`ndppd`](https://github.com/DanielAdolfsson/ndppd) module now supports [all config options](options.html#opt-services.ndppd.enable) provided by the current upstream version as service options. Additionally the `ndppd` package doesn\'t contain the systemd unit configuration from upstream anymore, the unit is completely configured by the NixOS module now. + +- New installs of NixOS will default to the Redmine 4.x series unless otherwise specified in `services.redmine.package` while existing installs of NixOS will default to the Redmine 3.x series. + +- The [Grafana module](options.html#opt-services.grafana.enable) now supports declarative [datasource and dashboard](http://docs.grafana.org/administration/provisioning/) provisioning. + +- The use of insecure ports on kubernetes has been deprecated. Thus options: `services.kubernetes.apiserver.port` and `services.kubernetes.controllerManager.port` has been renamed to `.insecurePort`, and default of both options has changed to 0 (disabled). + +- Note that the default value of `services.kubernetes.apiserver.bindAddress` has changed from 127.0.0.1 to 0.0.0.0, allowing the apiserver to be accessible from outside the master node itself. If the apiserver insecurePort is enabled, it is strongly recommended to only bind on the loopback interface. See: `services.kubernetes.apiserver.insecurebindAddress`. + +- The option `services.kubernetes.apiserver.allowPrivileged` and `services.kubernetes.kubelet.allowPrivileged` now defaults to false. Disallowing privileged containers on the cluster. + +- The kubernetes module does no longer add the kubernetes package to `environment.systemPackages` implicitly. + +- The `intel` driver has been removed from the default list of [X.org video drivers](options.html#opt-services.xserver.videoDrivers). The `modesetting` driver should take over automatically, it is better maintained upstream and has less problems with advanced X11 features. This can lead to a change in the output names used by `xrandr`. Some performance regressions on some GPU models might happen. Some OpenCL and VA-API applications might also break (Beignet seems to provide OpenCL support with `modesetting` driver, too). Kernel mode setting API does not support backlight control, so `xbacklight` tool will not work; backlight level can be controlled directly via `/sys/` or with `brightnessctl`. Users who need this functionality more than multi-output XRandR are advised to add \`intel\` to \`videoDrivers\` and report an issue (or provide additional details in an existing one) + +- Openmpi has been updated to version 4.0.0, which removes some deprecated MPI-1 symbols. This may break some older applications that still rely on those symbols. An upgrade guide can be found [here](https://www.open-mpi.org/faq/?category=mpi-removed). + + The nginx package now relies on OpenSSL 1.1 and supports TLS 1.3 by default. You can set the protocols used by the nginx service using [services.nginx.sslProtocols](options.html#opt-services.nginx.sslProtocols). + +- A new subcommand `nixos-rebuild edit` was added. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1903.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1903.xml deleted file mode 100644 index 5593cb3e5d..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1903.xml +++ /dev/null @@ -1,768 +0,0 @@ -
- Release 19.03 (“Koi”, 2019/04/11) - -
- Highlights - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - - - End of support is planned for end of October 2019, handing over to 19.09. - - - - - The default Python 3 interpreter is now CPython 3.7 instead of CPython - 3.6. - - - - - Added the Pantheon desktop environment. It can be enabled through - services.xserver.desktopManager.pantheon.enable. - - - - By default, services.xserver.desktopManager.pantheon - enables LightDM as a display manager, as pantheon's screen locking - implementation relies on it. - - - Because of that it is recommended to leave LightDM enabled. If you'd like - to disable it anyway, set - to - false and enable your preferred display manager. - - - - Also note that Pantheon's LightDM greeter is not enabled by default, - because it has numerous issues in NixOS and isn't optimal for use here - yet. - - - - - A major refactoring of the Kubernetes module has been completed. - Refactorings primarily focus on decoupling components and enhancing - security. Two-way TLS and RBAC has been enabled by default for all - components, which slightly changes the way the module is configured. See: - for details. - - - - - There is now a set of options for - , which allows to restrict services - into a - chroot - 2 - ed environment that only contains the store paths from - the runtime closure of the service. - - - -
- -
- New Services - - - The following new services were added since the last release: - - - - - - ./programs/nm-applet.nix - - - - - There is a new security.googleOsLogin module for using - OS - Login to manage SSH access to Google Compute Engine instances, - which supersedes the imperative and broken - google-accounts-daemon used in - nixos/modules/virtualisation/google-compute-config.nix. - - - - - ./services/misc/beanstalkd.nix - - - - - There is a new services.cockroachdb module for running - CockroachDB databases. NixOS now ships with CockroachDB 2.1.x as well, - available on x86_64-linux and - aarch64-linux. - - - - - - - - ./security/duosec.nix - - - - - The PAM module for Duo - Security has been enabled for use. One can configure it using the - options along with the corresponding PAM - option in - . - - - -
- -
- Backward Incompatibilities - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - - The minimum version of Nix required to evaluate Nixpkgs is now 2.0. - - - - - For users of NixOS 18.03 and 19.03, NixOS defaults to Nix 2.0, but - supports using Nix 1.11 by setting nix.package = - pkgs.nix1;. If this option is set to a Nix 1.11 package, you - will need to either unset the option or upgrade it to Nix 2.0. - - - - - For users of NixOS 17.09, you will first need to upgrade Nix by setting - nix.package = pkgs.nixStable2; and run - nixos-rebuild switch as the root - user. - - - - - For users of a daemon-less Nix installation on Linux or macOS, you can - upgrade Nix by running curl -L https://nixos.org/nix/install | - sh, or prior to doing a channel update, running - nix-env -iA nix. - - - If you have already run a channel update and Nix is no longer able to - evaluate Nixpkgs, the error message printed should provide adequate - directions for upgrading Nix. - - - - - For users of the Nix daemon on macOS, you can upgrade Nix by running - sudo -i sh -c 'nix-channel --update && nix-env -iA - nixpkgs.nix'; sudo launchctl stop org.nixos.nix-daemon; sudo launchctl - start org.nixos.nix-daemon. - - - - - - - The buildPythonPackage function now sets - strictDeps = true to help distinguish between native - and non-native dependencies in order to improve cross-compilation - compatibility. Note however that this may break user expressions. - - - - - The buildPythonPackage function now sets LANG - = C.UTF-8 to enable Unicode support. The - glibcLocales package is no longer needed as a build - input. - - - - - The Syncthing state and configuration data has been moved from - services.syncthing.dataDir to the newly defined - services.syncthing.configDir, which default to - /var/lib/syncthing/.config/syncthing. This change makes - possible to share synced directories using ACLs without Syncthing - resetting the permission on every start. - - - - - The ntp module now has sane default restrictions. If - you're relying on the previous defaults, which permitted all queries and - commands from all firewall-permitted sources, you can set - services.ntp.restrictDefault and - services.ntp.restrictSource to []. - - - - - Package rabbitmq_server is renamed to - rabbitmq-server. - - - - - The light module no longer uses setuid binaries, but - udev rules. As a consequence users of that module have to belong to the - video group in order to use the executable (i.e. - users.users.yourusername.extraGroups = ["video"];). - - - - - Buildbot now supports Python 3 and its packages have been moved to - pythonPackages. The options - and - can be used to select - the Python 2 or 3 version of the package. - - - - - Options - services.znc.confOptions.networks.name.userName - and - services.znc.confOptions.networks.name.modulePackages - were removed. They were never used for anything and can therefore safely - be removed. - - - - - Package wasm has been renamed - proglodyte-wasm. The package wasm - will be pointed to ocamlPackages.wasm in 19.09, so make - sure to update your configuration if you want to keep - proglodyte-wasm - - - - - When the nixpkgs.pkgs option is set, NixOS will no - longer ignore the nixpkgs.overlays option. The old - behavior can be recovered by setting nixpkgs.overlays = - lib.mkForce [];. - - - - - OpenSMTPD has been upgraded to version 6.4.0p1. This release makes - backwards-incompatible changes to the configuration file format. See - man smtpd.conf for more information on the new file - format. - - - - - The versioned postgresql have been renamed to use - underscore number seperators. For example, postgresql96 - has been renamed to postgresql_9_6. - - - - - Package consul-ui and passthrough - consul.ui have been removed. The package - consul now uses upstream releases that vendor the UI - into the binary. See - #48714 - for details. - - - - - Slurm introduces the new option - services.slurm.stateSaveLocation, which is now set to - /var/spool/slurm by default (instead of - /var/spool). Make sure to move all files to the new - directory or to set the option accordingly. - - - The slurmctld now runs as user slurm instead of - root. If you want to keep slurmctld running as - root, set services.slurm.user = - root. - - - The options services.slurm.nodeName and - services.slurm.partitionName are now sets of strings to - correctly reflect that fact that each of these options can occour more - than once in the configuration. - - - - - The solr package has been upgraded from 4.10.3 to 7.5.0 - and has undergone some major changes. The services.solr - module has been updated to reflect these changes. Please review - http://lucene.apache.org/solr/ carefully before upgrading. - - - - - Package ckb is renamed to ckb-next, - and options hardware.ckb.* are renamed to - hardware.ckb-next.*. - - - - - The option - services.xserver.displayManager.job.logToFile which was - previously set to true when using the display managers - lightdm, sddm or - xpra has been reset to the default value - (false). - - - - - Network interface indiscriminate NixOS firewall options - (networking.firewall.allow*) are now preserved when - also setting interface specific rules such as - networking.firewall.interfaces.en0.allow*. These rules - continue to use the pseudo device "default" - (networking.firewall.interfaces.default.*), and - assigning to this pseudo device will override the - (networking.firewall.allow*) options. - - - - - The nscd service now disables all caching of - passwd and group databases by - default. This was interferring with the correct functioning of the - libnss_systemd.so module which is used by - systemd to manage uids and usernames in the presence of - DynamicUser= in systemd services. This was already the - default behaviour in presence of services.sssd.enable = - true because nscd caching would interfere with - sssd in unpredictable ways as well. Because we're using - nscd not for caching, but for convincing glibc to find NSS modules in the - nix store instead of an absolute path, we have decided to disable caching - globally now, as it's usually not the behaviour the user wants and can - lead to surprising behaviour. Furthermore, negative caching of host - lookups is also disabled now by default. This should fix the issue of dns - lookups failing in the presence of an unreliable network. - - - If the old behaviour is desired, this can be restored by setting the - services.nscd.config option with the desired caching - parameters. - - services.nscd.config = - '' - server-user nscd - threads 1 - paranoia no - debug-level 0 - - enable-cache passwd yes - positive-time-to-live passwd 600 - negative-time-to-live passwd 20 - suggested-size passwd 211 - check-files passwd yes - persistent passwd no - shared passwd yes - - enable-cache group yes - positive-time-to-live group 3600 - negative-time-to-live group 60 - suggested-size group 211 - check-files group yes - persistent group no - shared group yes - - enable-cache hosts yes - positive-time-to-live hosts 600 - negative-time-to-live hosts 5 - suggested-size hosts 211 - check-files hosts yes - persistent hosts no - shared hosts yes - ''; - - See - #50316 - for details. - - - - - GitLab Shell previously used the nix store paths for the - gitlab-shell command in its - authorized_keys file, which might stop working after - garbage collection. To circumvent that, we regenerated that file on each - startup. As gitlab-shell has now been changed to use - /var/run/current-system/sw/bin/gitlab-shell, this is - not necessary anymore, but there might be leftover lines with a nix store - path. Regenerate the authorized_keys file via - sudo -u git -H gitlab-rake gitlab:shell:setup in that - case. - - - - - The pam_unix account module is now loaded with its - control field set to required instead of - sufficient, so that later PAM account modules that - might do more extensive checks are being executed. Previously, the whole - account module verification was exited prematurely in case a nss module - provided the account name to pam_unix. The LDAP and - SSSD NixOS modules already add their NSS modules when enabled. In case - your setup breaks due to some later PAM account module previosuly - shadowed, or failing NSS lookups, please file a bug. You can get back the - old behaviour by manually setting -.text]]> - . - - - - - The pam_unix password module is now loaded with its - control field set to sufficient instead of - required, so that password managed only by later PAM - password modules are being executed. Previously, for example, changing an - LDAP account's password through PAM was not possible: the whole password - module verification was exited prematurely by pam_unix, - preventing pam_ldap to manage the password as it - should. - - - - - fish has been upgraded to 3.0. It comes with a number - of improvements and backwards incompatible changes. See the - fish - release - notes for more information. - - - - - The ibus-table input method has had a change in config format, which - causes all previous settings to be lost. See - this - commit message for details. - - - - - NixOS module system type types.optionSet and - lib.mkOption argument options are - deprecated. Use types.submodule instead. - (#54637) - - - - - matrix-synapse has been updated to version 0.99. It - will no - longer generate a self-signed certificate on first launch and will - be - the - last version to accept self-signed certificates. As such, it is now - recommended to use a proper certificate verified by a root CA (for example - Let's Encrypt). The new manual - chapter on Matrix contains a working example of using nginx as a - reverse proxy in front of matrix-synapse, using Let's - Encrypt certificates. - - - - - mailutils now works by default when - sendmail is not in a setuid wrapper. As a consequence, - the sendmailPath argument, having lost its main use, - has been removed. - - - - - graylog has been upgraded from version 2.* to 3.*. Some - setups making use of extraConfig (especially those exposing Graylog via - reverse proxies) need to be updated as upstream removed/replaced some - settings. See - Upgrading - Graylog for details. - - - - - The option users.ldap.bind.password was renamed to users.ldap.bind.passwordFile, - and needs to be readable by the nslcd user. - Same applies to the new users.ldap.daemon.rootpwmodpwFile option. - - - - - nodejs-6_x is end-of-life. - nodejs-6_x, nodejs-slim-6_x and - nodePackages_6_x are removed. - - - -
- -
- Other Notable Changes - - - - - The module gained the option - which determines the used Matomo - version. - - - The Matomo module now also comes with the systemd service - matomo-archive-processing.service and a timer that - automatically triggers archive processing every hour. This means that you - can safely - - disable browser triggers for Matomo archiving at - Administration > System > General Settings. - - - Additionally, you can enable to - - delete old visitor logs at Administration > System > - Privacy, but make sure that you run systemctl start - matomo-archive-processing.service at least once without errors - if you have already collected data before, so that the reports get - archived before the source data gets deleted. - - - - - composableDerivation along with supporting library - functions has been removed. - - - - - The deprecated truecrypt package has been removed and - truecrypt attribute is now an alias for - veracrypt. VeraCrypt is backward-compatible with - TrueCrypt volumes. Note that cryptsetup also supports - loading TrueCrypt volumes. - - - - - The Kubernetes DNS addons, kube-dns, has been replaced with CoreDNS. This - change is made in accordance with Kubernetes making CoreDNS the official - default starting from - Kubernetes - v1.11. Please beware that upgrading DNS-addon on existing clusters - might induce minor downtime while the DNS-addon terminates and - re-initializes. Also note that the DNS-service now runs with 2 pod - replicas by default. The desired number of replicas can be configured - using: . - - - - - The quassel-webserver package and module was removed from nixpkgs due to - the lack of maintainers. - - - - - The manual gained a new chapter on - self-hosting matrix-synapse and - riot-web , the most prevalent server and client - implementations for the - Matrix federated - communication network. - - - - - The astah-community package was removed from nixpkgs due to it being - discontinued and the downloads not being available anymore. - - - - - The httpd service now saves log files with a .log file extension by - default for easier integration with the logrotate service. - - - - - The owncloud server packages and httpd subservice module were removed from - nixpkgs due to the lack of maintainers. - - - - - It is possible now to uze ZRAM devices as general purpose ephemeral block - devices, not only as swap. Using more than 1 device as ZRAM swap is no - longer recommended, but is still possible by setting - zramSwap.swapDevices explicitly. - - - ZRAM algorithm can be changed now. - - - Changes to ZRAM algorithm are applied during nixos-rebuild - switch, so make sure you have enough swap space on disk to - survive ZRAM device rebuild. Alternatively, use nixos-rebuild - boot; reboot. - - - - - Flat volumes are now disabled by default in - hardware.pulseaudio. This has been done to prevent - applications, which are unaware of this feature, setting their volumes to - 100% on startup causing harm to your audio hardware and potentially your - ears. - - - - With this change application specific volumes are relative to the master - volume which can be adjusted independently, whereas before they were - absolute; meaning that in effect, it scaled the device-volume with the - volume of the loudest application. - - - - - - The - ndppd - module now supports all config - options provided by the current upstream version as service - options. Additionally the ndppd package doesn't contain - the systemd unit configuration from upstream anymore, the unit is - completely configured by the NixOS module now. - - - - - New installs of NixOS will default to the Redmine 4.x series unless - otherwise specified in services.redmine.package while - existing installs of NixOS will default to the Redmine 3.x series. - - - - - The Grafana module now - supports declarative - datasource - and dashboard provisioning. - - - - - The use of insecure ports on kubernetes has been deprecated. Thus options: - services.kubernetes.apiserver.port and - services.kubernetes.controllerManager.port has been - renamed to .insecurePort, and default of both options - has changed to 0 (disabled). - - - - - Note that the default value of - services.kubernetes.apiserver.bindAddress has changed - from 127.0.0.1 to 0.0.0.0, allowing the apiserver to be accessible from - outside the master node itself. If the apiserver insecurePort is enabled, - it is strongly recommended to only bind on the loopback interface. See: - services.kubernetes.apiserver.insecurebindAddress. - - - - - The option - services.kubernetes.apiserver.allowPrivileged and - services.kubernetes.kubelet.allowPrivileged now - defaults to false. Disallowing privileged containers on the cluster. - - - - - The kubernetes module does no longer add the kubernetes package to - environment.systemPackages implicitly. - - - - - The intel driver has been removed from the default list - of X.org video - drivers. The modesetting driver should take over - automatically, it is better maintained upstream and has less problems with - advanced X11 features. This can lead to a change in the output names used - by xrandr. Some performance regressions on some GPU - models might happen. Some OpenCL and VA-API applications might also break - (Beignet seems to provide OpenCL support with - modesetting driver, too). Kernel mode setting API does - not support backlight control, so xbacklight tool will - not work; backlight level can be controlled directly via - /sys/ or with brightnessctl. Users - who need this functionality more than multi-output XRandR are advised to - add `intel` to `videoDrivers` and report an issue (or provide additional - details in an existing one) - - - - - Openmpi has been updated to version 4.0.0, which removes some deprecated - MPI-1 symbols. This may break some older applications that still rely on - those symbols. An upgrade guide can be found - here. - - - The nginx package now relies on OpenSSL 1.1 and supports TLS 1.3 by - default. You can set the protocols used by the nginx service using - . - - - - - A new subcommand nixos-rebuild edit was added. - - - -
-
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1909.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1909.section.md new file mode 100644 index 0000000000..572f1bf5a2 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1909.section.md @@ -0,0 +1,313 @@ +# Release 19.09 ("Loris", 2019/10/09) {#sec-release-19.09} + +## Highlights {#sec-release-19.09-highlights} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- End of support is planned for end of April 2020, handing over to 20.03. + +- Nix has been updated to 2.3; see its [release notes](https://nixos.org/nix/manual/#ssec-relnotes-2.3). + +- Core version changes: + + systemd: 239 -\> 243 + + gcc: 7 -\> 8 + + glibc: 2.27 (unchanged) + + linux: 4.19 LTS (unchanged) + + openssl: 1.0 -\> 1.1 + +- Desktop version changes: + + plasma5: 5.14 -\> 5.16 + + gnome3: 3.30 -\> 3.32 + +- PHP now defaults to PHP 7.3, updated from 7.2. + +- PHP 7.1 is no longer supported due to upstream not supporting this version for the entire lifecycle of the 19.09 release. + +- The binfmt module is now easier to use. Additional systems can be added through `boot.binfmt.emulatedSystems`. For instance, `boot.binfmt.emulatedSystems = [ "wasm32-wasi" "x86_64-windows" "aarch64-linux" ];` will set up binfmt interpreters for each of those listed systems. + +- The installer now uses a less privileged `nixos` user whereas before we logged in as root. To gain root privileges use `sudo -i` without a password. + +- We\'ve updated to Xfce 4.14, which brings a new module `services.xserver.desktopManager.xfce4-14`. If you\'d like to upgrade, please switch from the `services.xserver.desktopManager.xfce` module as it will be deprecated in a future release. They\'re incompatibilities with the current Xfce module; it doesn\'t support `thunarPlugins` and it isn\'t recommended to use `services.xserver.desktopManager.xfce` and `services.xserver.desktopManager.xfce4-14` simultaneously or to downgrade from Xfce 4.14 after upgrading. + +- The GNOME 3 desktop manager module sports an interface to enable/disable core services, applications, and optional GNOME packages like games. + + - `services.gnome3.core-os-services.enable` + + - `services.gnome3.core-shell.enable` + + - `services.gnome3.core-utilities.enable` + + - `services.gnome3.games.enable` + + With these options we hope to give users finer grained control over their systems. Prior to this change you\'d either have to manually disable options or use `environment.gnome3.excludePackages` which only excluded the optional applications. `environment.gnome3.excludePackages` is now unguarded, it can exclude any package installed with `environment.systemPackages` in the GNOME 3 module. + +- Orthogonal to the previous changes to the GNOME 3 desktop manager module, we\'ve updated all default services and applications to match as close as possible to a default reference GNOME 3 experience. + + **The following changes were enacted in `services.gnome3.core-utilities.enable`** + + - `accerciser` + + - `dconf-editor` + + - `evolution` + + - `gnome-documents` + + - `gnome-nettool` + + - `gnome-power-manager` + + - `gnome-todo` + + - `gnome-tweaks` + + - `gnome-usage` + + - `gucharmap` + + - `nautilus-sendto` + + - `vinagre` + + - `cheese` + + - `geary` + + **The following changes were enacted in `services.gnome3.core-shell.enable`** + + - `gnome-color-manager` + + - `orca` + + - `services.avahi.enable` + +## New Services {#sec-release-19.09-new-services} + +The following new services were added since the last release: + +- `./programs/dwm-status.nix` + +- The new `hardware.printers` module allows to declaratively configure CUPS printers via the `ensurePrinters` and `ensureDefaultPrinter` options. `ensurePrinters` will never delete existing printers, but will make sure that the given printers are configured as declared. + +- There is a new [services.system-config-printer.enable](options.html#opt-services.system-config-printer.enable) and [programs.system-config-printer.enable](options.html#opt-programs.system-config-printer.enable) module for the program of the same name. If you previously had `system-config-printer` enabled through some other means you should migrate to using one of these modules. + + - `services.xserver.desktopManager.plasma5` + + - `services.xserver.desktopManager.gnome3` + + - `services.xserver.desktopManager.pantheon` + + - `services.xserver.desktopManager.mate` Note Mate uses `programs.system-config-printer` as it doesn\'t use it as a service, but its graphical interface directly. + +- [services.blueman.enable](options.html#opt-services.blueman.enable) has been added. If you previously had blueman installed via `environment.systemPackages` please migrate to using the NixOS module, as this would result in an insufficiently configured blueman. + +## Backward Incompatibilities {#sec-release-19.09-incompatibilities} + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- Buildbot no longer supports Python 2, as support was dropped upstream in version 2.0.0. Configurations may need to be modified to make them compatible with Python 3. + +- PostgreSQL now uses `/run/postgresql` as its socket directory instead of `/tmp`. So if you run an application like eg. Nextcloud, where you need to use the Unix socket path as the database host name, you need to change it accordingly. + +- PostgreSQL 9.4 is scheduled EOL during the 19.09 life cycle and has been removed. + +- The options `services.prometheus.alertmanager.user` and `services.prometheus.alertmanager.group` have been removed because the alertmanager service is now using systemd\'s [ DynamicUser mechanism](http://0pointer.net/blog/dynamic-users-with-systemd.html) which obviates these options. + +- The NetworkManager systemd unit was renamed back from network-manager.service to NetworkManager.service for better compatibility with other applications expecting this name. The same applies to ModemManager where modem-manager.service is now called ModemManager.service again. + +- The `services.nzbget.configFile` and `services.nzbget.openFirewall` options were removed as they are managed internally by the nzbget. The `services.nzbget.dataDir` option hadn\'t actually been used by the module for some time and so was removed as cleanup. + +- The `services.mysql.pidDir` option was removed, as it was only used by the wordpress apache-httpd service to wait for mysql to have started up. This can be accomplished by either describing a dependency on mysql.service (preferred) or waiting for the (hardcoded) `/run/mysqld/mysql.sock` file to appear. + +- The `services.emby.enable` module has been removed, see `services.jellyfin.enable` instead for a free software fork of Emby. See the Jellyfin documentation: [ Migrating from Emby to Jellyfin ](https://jellyfin.readthedocs.io/en/latest/administrator-docs/migrate-from-emby/) + +- IPv6 Privacy Extensions are now enabled by default for undeclared interfaces. The previous behaviour was quite misleading --- even though the default value for `networking.interfaces.*.preferTempAddress` was `true`, undeclared interfaces would not prefer temporary addresses. Now, interfaces not mentioned in the config will prefer temporary addresses. EUI64 addresses can still be set as preferred by explicitly setting the option to `false` for the interface in question. + +- Since Bittorrent Sync was superseded by Resilio Sync in 2016, the `bittorrentSync`, `bittorrentSync14`, and `bittorrentSync16` packages have been removed in favor of `resilio-sync`. + + The corresponding module, `services.btsync` has been replaced by the `services.resilio` module. + +- The httpd service no longer attempts to start the postgresql service. If you have come to depend on this behaviour then you can preserve the behavior with the following configuration: `systemd.services.httpd.after = [ "postgresql.service" ];` + + The option `services.httpd.extraSubservices` has been marked as deprecated. You may still use this feature, but it will be removed in a future release of NixOS. You are encouraged to convert any httpd subservices you may have written to a full NixOS module. + + Most of the httpd subservices packaged with NixOS have been replaced with full NixOS modules including LimeSurvey, WordPress, and Zabbix. These modules can be enabled using the `services.limesurvey.enable`, `services.mediawiki.enable`, `services.wordpress.enable`, and `services.zabbixWeb.enable` options. + +- The option `systemd.network.networks..routes.*.routeConfig.GatewayOnlink` was renamed to `systemd.network.networks..routes.*.routeConfig.GatewayOnLink` (capital `L`). This follows [ upstreams renaming ](https://github.com/systemd/systemd/commit/9cb8c5593443d24c19e40bfd4fc06d672f8c554c) of the setting. + +- As of this release the NixOps feature `autoLuks` is deprecated. It no longer works with our systemd version without manual intervention. + + Whenever the usage of the module is detected the evaluation will fail with a message explaining why and how to deal with the situation. + + A new knob named `nixops.enableDeprecatedAutoLuks` has been introduced to disable the eval failure and to acknowledge the notice was received and read. If you plan on using the feature please note that it might break with subsequent updates. + + Make sure you set the `_netdev` option for each of the file systems referring to block devices provided by the autoLuks module. Not doing this might render the system in a state where it doesn\'t boot anymore. + + If you are actively using the `autoLuks` module please let us know in [issue \#62211](https://github.com/NixOS/nixpkgs/issues/62211). + +- The setopt declarations will be evaluated at the end of `/etc/zshrc`, so any code in [programs.zsh.interactiveShellInit](options.html#opt-programs.zsh.interactiveShellInit), [programs.zsh.loginShellInit](options.html#opt-programs.zsh.loginShellInit) and [programs.zsh.promptInit](options.html#opt-programs.zsh.promptInit) may break if it relies on those options being set. + +- The `prometheus-nginx-exporter` package now uses the offical exporter provided by NGINX Inc. Its metrics are differently structured and are incompatible to the old ones. For information about the metrics, have a look at the [official repo](https://github.com/nginxinc/nginx-prometheus-exporter). + +- The `shibboleth-sp` package has been updated to version 3. It is largely backward compatible, for further information refer to the [release notes](https://wiki.shibboleth.net/confluence/display/SP3/ReleaseNotes) and [upgrade guide](https://wiki.shibboleth.net/confluence/display/SP3/UpgradingFromV2). + + Nodejs 8 is scheduled EOL under the lifetime of 19.09 and has been dropped. + +- By default, prometheus exporters are now run with `DynamicUser` enabled. Exporters that need a real user, now run under a seperate user and group which follow the pattern `-exporter`, instead of the previous default `nobody` and `nogroup`. Only some exporters are affected by the latter, namely the exporters `dovecot`, `node`, `postfix` and `varnish`. + +- The `ibus-qt` package is not installed by default anymore when [i18n.inputMethod.enabled](options.html#opt-i18n.inputMethod.enabled) is set to `ibus`. If IBus support in Qt 4.x applications is required, add the `ibus-qt` package to your [environment.systemPackages](options.html#opt-environment.systemPackages) manually. + +- The CUPS Printing service now uses socket-based activation by default, only starting when needed. The previous behavior can be restored by setting `services.cups.startWhenNeeded` to `false`. + +- The `services.systemhealth` module has been removed from nixpkgs due to lack of maintainer. + +- The `services.mantisbt` module has been removed from nixpkgs due to lack of maintainer. + +- Squid 3 has been removed and the `squid` derivation now refers to Squid 4. + +- The `services.pdns-recursor.extraConfig` option has been replaced by `services.pdns-recursor.settings`. The new option allows setting extra configuration while being better type-checked and mergeable. + +- No service depends on `keys.target` anymore which is a systemd target that indicates if all [NixOps keys](https://nixos.org/nixops/manual/#idm140737322342384) were successfully uploaded. Instead, `-key.service` should be used to define a dependency of a key in a service. The full issue behind the `keys.target` dependency is described at [NixOS/nixpkgs\#67265](https://github.com/NixOS/nixpkgs/issues/67265). + + The following services are affected by this: + + - [`services.dovecot2`](options.html#opt-services.dovecot2.enable) + + - [`services.nsd`](options.html#opt-services.nsd.enable) + + - [`services.softether`](options.html#opt-services.softether.enable) + + - [`services.strongswan`](options.html#opt-services.strongswan.enable) + + - [`services.strongswan-swanctl`](options.html#opt-services.strongswan-swanctl.enable) + + - [`services.httpd`](options.html#opt-services.httpd.enable) + +- The `security.acme.directory` option has been replaced by a read-only `security.acme.certs..directory` option for each certificate you define. This will be a subdirectory of `/var/lib/acme`. You can use this read-only option to figure out where the certificates are stored for a specific certificate. For example, the `services.nginx.virtualhosts..enableACME` option will use this directory option to find the certs for the virtual host. + + `security.acme.preDelay` and `security.acme.activationDelay` options have been removed. To execute a service before certificates are provisioned or renewed add a `RequiredBy=acme-${cert}.service` to any service. + + Furthermore, the acme module will not automatically add a dependency on `lighttpd.service` anymore. If you are using certficates provided by letsencrypt for lighttpd, then you should depend on the certificate service `acme-${cert}.service>` manually. + + For nginx, the dependencies are still automatically managed when `services.nginx.virtualhosts..enableACME` is enabled just like before. What changed is that nginx now directly depends on the specific certificates that it needs, instead of depending on the catch-all `acme-certificates.target`. This target unit was also removed from the codebase. This will mean nginx will no longer depend on certificates it isn\'t explicitly managing and fixes a bug with certificate renewal ordering racing with nginx restarting which could lead to nginx getting in a broken state as described at [NixOS/nixpkgs\#60180](https://github.com/NixOS/nixpkgs/issues/60180). + +- The old deprecated `emacs` package sets have been dropped. What used to be called `emacsPackagesNg` is now simply called `emacsPackages`. + +- `services.xserver.desktopManager.xterm` is now disabled by default if `stateVersion` is 19.09 or higher. Previously the xterm desktopManager was enabled when xserver was enabled, but it isn\'t useful for all people so it didn\'t make sense to have any desktopManager enabled default. + +- The WeeChat plugin `pkgs.weechatScripts.weechat-xmpp` has been removed as it doesn\'t receive any updates from upstream and depends on outdated Python2-based modules. + +- Old unsupported versions (`logstash5`, `kibana5`, `filebeat5`, `heartbeat5`, `metricbeat5`, `packetbeat5`) of the ELK-stack and Elastic beats have been removed. + +- For NixOS 19.03, both Prometheus 1 and 2 were available to allow for a seamless transition from version 1 to 2 with existing setups. Because Prometheus 1 is no longer developed, it was removed. Prometheus 2 is now configured with `services.prometheus`. + +- Citrix Receiver (`citrix_receiver`) has been dropped in favor of Citrix Workspace (`citrix_workspace`). + +- The `services.gitlab` module has had its literal secret options (`services.gitlab.smtp.password`, `services.gitlab.databasePassword`, `services.gitlab.initialRootPassword`, `services.gitlab.secrets.secret`, `services.gitlab.secrets.db`, `services.gitlab.secrets.otp` and `services.gitlab.secrets.jws`) replaced by file-based versions (`services.gitlab.smtp.passwordFile`, `services.gitlab.databasePasswordFile`, `services.gitlab.initialRootPasswordFile`, `services.gitlab.secrets.secretFile`, `services.gitlab.secrets.dbFile`, `services.gitlab.secrets.otpFile` and `services.gitlab.secrets.jwsFile`). This was done so that secrets aren\'t stored in the world-readable nix store, but means that for each option you\'ll have to create a file with the same exact string, add \"File\" to the end of the option name, and change the definition to a string pointing to the corresponding file; e.g. `services.gitlab.databasePassword = "supersecurepassword"` becomes `services.gitlab.databasePasswordFile = "/path/to/secret_file"` where the file `secret_file` contains the string `supersecurepassword`. + + The state path (`services.gitlab.statePath`) now has the following restriction: no parent directory can be owned by any other user than `root` or the user specified in `services.gitlab.user`; i.e. if `services.gitlab.statePath` is set to `/var/lib/gitlab/state`, `gitlab` and all parent directories must be owned by either `root` or the user specified in `services.gitlab.user`. + +- The `networking.useDHCP` option is unsupported in combination with `networking.useNetworkd` in anticipation of defaulting to it. It has to be set to `false` and enabled per interface with `networking.interfaces..useDHCP = true;` + +- The Twitter client `corebird` has been dropped as [it is discontinued and does not work against the new Twitter API](https://www.patreon.com/posts/corebirds-future-18921328). Please use the fork `cawbird` instead which has been adapted to the API changes and is still maintained. + +- The `nodejs-11_x` package has been removed as it\'s EOLed by upstream. + +- Because of the systemd upgrade, systemd-timesyncd will no longer work if `system.stateVersion` is not set correctly. When upgrading from NixOS 19.03, please make sure that `system.stateVersion` is set to `"19.03"`, or lower if the installation dates back to an earlier version of NixOS. + +- Due to the short lifetime of non-LTS kernel releases package attributes like `linux_5_1`, `linux_5_2` and `linux_5_3` have been removed to discourage dependence on specific non-LTS kernel versions in stable NixOS releases. Going forward, versioned attributes like `linux_4_9` will exist for LTS versions only. Please use `linux_latest` or `linux_testing` if you depend on non-LTS releases. Keep in mind that `linux_latest` and `linux_testing` will change versions under the hood during the lifetime of a stable release and might include breaking changes. + +- Because of the systemd upgrade, some network interfaces might change their name. For details see [ upstream docs](https://www.freedesktop.org/software/systemd/man/systemd.net-naming-scheme.html#History) or [ our ticket](https://github.com/NixOS/nixpkgs/issues/71086). + +## Other Notable Changes {#sec-release-19.09-notable-changes} + +- The `documentation` module gained an option named `documentation.nixos.includeAllModules` which makes the generated configuration.nix 5 manual page include all options from all NixOS modules included in a given `configuration.nix` configuration file. Currently, it is set to `false` by default as enabling it frequently prevents evaluation. But the plan is to eventually have it set to `true` by default. Please set it to `true` now in your `configuration.nix` and fix all the bugs it uncovers. + +- The `vlc` package gained support for Chromecast streaming, enabled by default. TCP port 8010 must be open for it to work, so something like `networking.firewall.allowedTCPPorts = [ 8010 ];` may be required in your configuration. Also consider enabling [ Accelerated Video Playback](https://nixos.wiki/wiki/Accelerated_Video_Playback) for better transcoding performance. + +- The following changes apply if the `stateVersion` is changed to 19.09 or higher. For `stateVersion = "19.03"` or lower the old behavior is preserved. + + - `solr.package` defaults to `pkgs.solr_8`. + +- The `hunspellDicts.fr-any` dictionary now ships with `fr_FR.{aff,dic}` which is linked to `fr-toutesvariantes.{aff,dic}`. + +- The `mysql` service now runs as `mysql` user. Previously, systemd did execute it as root, and mysql dropped privileges itself. This includes `ExecStartPre=` and `ExecStartPost=` phases. To accomplish that, runtime and data directory setup was delegated to RuntimeDirectory and tmpfiles. + +- With the upgrade to systemd version 242 the `systemd-timesyncd` service is no longer using `DynamicUser=yes`. In order for the upgrade to work we rely on an activation script to move the state from the old to the new directory. The older directory (prior `19.09`) was `/var/lib/private/systemd/timesync`. + + As long as the `system.config.stateVersion` is below `19.09` the state folder will migrated to its proper location (`/var/lib/systemd/timesync`), if required. + +- The package `avahi` is now built to look up service definitions from `/etc/avahi/services` instead of its output directory in the nix store. Accordingly the module `avahi` now supports custom service definitions via `services.avahi.extraServiceFiles`, which are then placed in the aforementioned directory. See avahi.service5 for more information on custom service definitions. + +- Since version 0.1.19, `cargo-vendor` honors package includes that are specified in the `Cargo.toml` file of Rust crates. `rustPlatform.buildRustPackage` uses `cargo-vendor` to collect and build dependent crates. Since this change in `cargo-vendor` changes the set of vendored files for most Rust packages, the hash that use used to verify the dependencies, `cargoSha256`, also changes. + + The `cargoSha256` hashes of all in-tree derivations that use `buildRustPackage` have been updated to reflect this change. However, third-party derivations that use `buildRustPackage` may have to be updated as well. + +- The `consul` package was upgraded past version `1.5`, so its deprecated legacy UI is no longer available. + +- The default resample-method for PulseAudio has been changed from the upstream default `speex-float-1` to `speex-float-5`. Be aware that low-powered ARM-based and MIPS-based boards will struggle with this so you\'ll need to set `hardware.pulseaudio.daemon.config.resample-method` back to `speex-float-1`. + +- The `phabricator` package and associated `httpd.extraSubservice`, as well as the `phd` service have been removed from nixpkgs due to lack of maintainer. + +- The `mercurial` `httpd.extraSubservice` has been removed from nixpkgs due to lack of maintainer. + +- The `trac` `httpd.extraSubservice` has been removed from nixpkgs because it was unmaintained. + +- The `foswiki` package and associated `httpd.extraSubservice` have been removed from nixpkgs due to lack of maintainer. + +- The `tomcat-connector` `httpd.extraSubservice` has been removed from nixpkgs. + +- It\'s now possible to change configuration in [services.nextcloud](options.html#opt-services.nextcloud.enable) after the initial deploy since all config parameters are persisted in an additional config file generated by the module. Previously core configuration like database parameters were set using their imperative installer after creating `/var/lib/nextcloud`. + +- There exists now `lib.forEach`, which is like `map`, but with arguments flipped. When mapping function body spans many lines (or has nested `map`s), it is often hard to follow which list is modified. + + Previous solution to this problem was either to use `lib.flip map` idiom or extract that anonymous mapping function to a named one. Both can still be used but `lib.forEach` is preferred over `lib.flip map`. + + The `/etc/sysctl.d/nixos.conf` file containing all the options set via [boot.kernel.sysctl](options.html#opt-boot.kernel.sysctl) was moved to `/etc/sysctl.d/60-nixos.conf`, as sysctl.d5 recommends prefixing all filenames in `/etc/sysctl.d` with a two-digit number and a dash to simplify the ordering of the files. + +- We now install the sysctl snippets shipped with systemd. + + - Loose reverse path filtering + + - Source route filtering + + - `fq_codel` as a packet scheduler (this helps to fight bufferbloat) + + This also configures the kernel to pass core dumps to `systemd-coredump`, and restricts the SysRq key combinations to the sync command only. These sysctl snippets can be found in `/etc/sysctl.d/50-*.conf`, and overridden via [boot.kernel.sysctl](options.html#opt-boot.kernel.sysctl) (which will place the parameters in `/etc/sysctl.d/60-nixos.conf`). + +- Core dumps are now processed by `systemd-coredump` by default. `systemd-coredump` behaviour can still be modified via `systemd.coredump.extraConfig`. To stick to the old behaviour (having the kernel dump to a file called `core` in the working directory), without piping it through `systemd-coredump`, set `systemd.coredump.enable` to `false`. + +- `systemd.packages` option now also supports generators and shutdown scripts. Old `systemd.generator-packages` option has been removed. + +- The `rmilter` package was removed with associated module and options due deprecation by upstream developer. Use `rspamd` in proxy mode instead. + +- systemd cgroup accounting via the [systemd.enableCgroupAccounting](options.html#opt-systemd.enableCgroupAccounting) option is now enabled by default. It now also enables the more recent Block IO and IP accounting features. + +- We no longer enable custom font rendering settings with `fonts.fontconfig.penultimate.enable` by default. The defaults from fontconfig are sufficient. + +- The `crashplan` package and the `crashplan` service have been removed from nixpkgs due to crashplan shutting down the service, while the `crashplansb` package and `crashplan-small-business` service have been removed from nixpkgs due to lack of maintainer. + + The [redis module](options.html#opt-services.redis.enable) was hardcoded to use the `redis` user, `/run/redis` as runtime directory and `/var/lib/redis` as state directory. Note that the NixOS module for Redis now disables kernel support for Transparent Huge Pages (THP), because this features causes major performance problems for Redis, e.g. (https://redis.io/topics/latency). + +- Using `fonts.enableDefaultFonts` adds a default emoji font `noto-fonts-emoji`. + + - `services.xserver.enable` + + - `programs.sway.enable` + + - `programs.way-cooler.enable` + + - `services.xrdp.enable` + +- The `altcoins` categorization of packages has been removed. You now access these packages at the top level, ie. `nix-shell -p dogecoin` instead of `nix-shell -p altcoins.dogecoin`, etc. + +- Ceph has been upgraded to v14.2.1. See the [release notes](https://ceph.com/releases/v14-2-0-nautilus-released/) for details. The mgr dashboard as well as osds backed by loop-devices is no longer explicitly supported by the package and module. Note: There\'s been some issues with python-cherrypy, which is used by the dashboard and prometheus mgr modules (and possibly others), hence 0000-dont-check-cherrypy-version.patch. + +- `pkgs.weechat` is now compiled against `pkgs.python3`. Weechat also recommends [to use Python3 in their docs.](https://weechat.org/scripts/python3/) diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1909.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1909.xml deleted file mode 100644 index 0dae49c636..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-1909.xml +++ /dev/null @@ -1,902 +0,0 @@ -
- Release 19.09 (“Loris”, 2019/10/09) - -
- Highlights - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - - - End of support is planned for end of April 2020, handing over to 20.03. - - - - - Nix has been updated to 2.3; see its - release - notes. - - - - Core version changes: - systemd: 239 -> 243 - gcc: 7 -> 8 - glibc: 2.27 (unchanged) - linux: 4.19 LTS (unchanged) - openssl: 1.0 -> 1.1 - - - Desktop version changes: - plasma5: 5.14 -> 5.16 - gnome3: 3.30 -> 3.32 - - - - PHP now defaults to PHP 7.3, updated from 7.2. - - - - - PHP 7.1 is no longer supported due to upstream not supporting this version for the entire lifecycle of the 19.09 release. - - - - - The binfmt module is now easier to use. Additional systems can - be added through . - For instance, boot.binfmt.emulatedSystems = [ - "wasm32-wasi" "x86_64-windows" "aarch64-linux" ]; will - set up binfmt interpreters for each of those listed systems. - - - - - The installer now uses a less privileged nixos user whereas before we logged in as root. - To gain root privileges use sudo -i without a password. - - - - - We've updated to Xfce 4.14, which brings a new module . - If you'd like to upgrade, please switch from the module as it - will be deprecated in a future release. They're incompatibilities with the current Xfce module; it doesn't support - and it isn't recommended to use - and simultaneously or to downgrade from Xfce 4.14 after upgrading. - - - - - The GNOME 3 desktop manager module sports an interface to enable/disable core services, applications, and optional GNOME packages - like games. - - This can be achieved with the following options which the desktop manager default enables, excluding games. - - - - - - With these options we hope to give users finer grained control over their systems. Prior to this change you'd either have to manually - disable options or use which only excluded the optional applications. - is now unguarded, it can exclude any package installed with - in the GNOME 3 module. - - - - - Orthogonal to the previous changes to the GNOME 3 desktop manager module, we've updated all default services and applications - to match as close as possible to a default reference GNOME 3 experience. - - - The following changes were enacted in - - - Applications removed from defaults: - accerciser - dconf-editor - evolution - gnome-documents - gnome-nettool - gnome-power-manager - gnome-todo - gnome-tweaks - gnome-usage - gucharmap - nautilus-sendto - vinagre - - - Applications added to defaults: - cheese - geary - - - The following changes were enacted in - - - Applications added to defaults: - gnome-color-manager - orca - - - Services enabled: - - - - -
- -
- New Services - - - The following new services were added since the last release: - - - - - - ./programs/dwm-status.nix - - - - - The new hardware.printers module allows to declaratively configure CUPS printers - via the ensurePrinters and - ensureDefaultPrinter options. - ensurePrinters will never delete existing printers, - but will make sure that the given printers are configured as declared. - - - - - There is a new and module - for the program of the same name. If you previously had system-config-printer enabled through some other - means you should migrate to using one of these modules. - - - If you're a user of the following desktopManager modules no action is needed: - - - - - - - - - - - - - Note Mate uses programs.system-config-printer as it doesn't - use it as a service, but its graphical interface directly. - - - - - - - has been added. - If you previously had blueman installed via please - migrate to using the NixOS module, as this would result in an insufficiently configured blueman. - - - - -
- -
- Backward Incompatibilities - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - - Buildbot no longer supports Python 2, as support was dropped upstream in - version 2.0.0. Configurations may need to be modified to make them - compatible with Python 3. - - - - - PostgreSQL now uses - /run/postgresql as its socket - directory instead of /tmp. So - if you run an application like eg. Nextcloud, where you need to use - the Unix socket path as the database host name, you need to change it - accordingly. - - - - - PostgreSQL 9.4 is scheduled EOL during the 19.09 life cycle and has been removed. - - - - - The options and - have been removed - because the alertmanager service is now using systemd's - DynamicUser mechanism which obviates these options. - - - - - The NetworkManager systemd unit was renamed back from network-manager.service to - NetworkManager.service for better compatibility with other applications expecting this name. - The same applies to ModemManager where modem-manager.service is now called ModemManager.service again. - - - - - The and - options were removed as they are managed internally by the nzbget. The - option hadn't actually been used by - the module for some time and so was removed as cleanup. - - - - - The option was removed, as it was only used by the wordpress - apache-httpd service to wait for mysql to have started up. - This can be accomplished by either describing a dependency on mysql.service (preferred) - or waiting for the (hardcoded) /run/mysqld/mysql.sock file to appear. - - - - - The module has been removed, see - instead for a free software fork of Emby. - - See the Jellyfin documentation: - - Migrating from Emby to Jellyfin - - - - - - IPv6 Privacy Extensions are now enabled by default for undeclared - interfaces. The previous behaviour was quite misleading — even though - the default value for - was - true, undeclared interfaces would not prefer temporary - addresses. Now, interfaces not mentioned in the config will prefer - temporary addresses. EUI64 addresses can still be set as preferred by - explicitly setting the option to false for the - interface in question. - - - - - Since Bittorrent Sync was superseded by Resilio Sync in 2016, the - bittorrentSync, bittorrentSync14, - and bittorrentSync16 packages have been removed in - favor of resilio-sync. - - - The corresponding module, has been - replaced by the module. - - - - - The httpd service no longer attempts to start the postgresql service. If you have come to depend - on this behaviour then you can preserve the behavior with the following configuration: - systemd.services.httpd.after = [ "postgresql.service" ]; - - - The option has been - marked as deprecated. You may still use this feature, but it will be - removed in a future release of NixOS. You are encouraged to convert any - httpd subservices you may have written to a full NixOS module. - - - Most of the httpd subservices packaged with NixOS have been replaced with - full NixOS modules including LimeSurvey, WordPress, and Zabbix. These - modules can be enabled using the , - , , - and options. - - - - - The option - was renamed to - (capital L). This follows - - upstreams renaming - of the setting. - - - - - As of this release the NixOps feature autoLuks is deprecated. It no longer works - with our systemd version without manual intervention. - - - Whenever the usage of the module is detected the evaluation will fail with a message - explaining why and how to deal with the situation. - - - A new knob named nixops.enableDeprecatedAutoLuks - has been introduced to disable the eval failure and to acknowledge the notice was received and read. - If you plan on using the feature please note that it might break with subsequent updates. - - - Make sure you set the _netdev option for each of the file systems referring to block - devices provided by the autoLuks module. Not doing this might render the system in a - state where it doesn't boot anymore. - - - If you are actively using the autoLuks module please let us know in - issue #62211. - - - - - The setopt declarations will be evaluated at the end of /etc/zshrc, so any code in , - and may break if it relies on those options being set. - - - - - The prometheus-nginx-exporter package now uses the offical exporter provided by NGINX Inc. - Its metrics are differently structured and are incompatible to the old ones. For information about the metrics, - have a look at the official repo. - - - - - The shibboleth-sp package has been updated to version 3. - It is largely backward compatible, for further information refer to the - release notes - and upgrade guide. - - - Nodejs 8 is scheduled EOL under the lifetime of 19.09 and has been dropped. - - - - - By default, prometheus exporters are now run with DynamicUser enabled. - Exporters that need a real user, now run under a seperate user and group which follow the pattern <exporter-name>-exporter, instead of the previous default nobody and nogroup. - Only some exporters are affected by the latter, namely the exporters dovecot, node, postfix and varnish. - - - - - The ibus-qt package is not installed by default anymore when is set to ibus. - If IBus support in Qt 4.x applications is required, add the ibus-qt package to your manually. - - - - - The CUPS Printing service now uses socket-based activation by - default, only starting when needed. The previous behavior can - be restored by setting - to - false. - - - - - The module has been removed from nixpkgs due to lack of maintainer. - - - - - The module has been removed from nixpkgs due to lack of maintainer. - - - - - Squid 3 has been removed and the derivation now refers to Squid 4. - - - - - The option has been replaced by - . The new option allows setting extra - configuration while being better type-checked and mergeable. - - - - - No service depends on keys.target anymore which is a systemd - target that indicates if all NixOps keys were successfully uploaded. - Instead, <key-name>-key.service should be used to define - a dependency of a key in a service. The full issue behind the keys.target - dependency is described at NixOS/nixpkgs#67265. - - - The following services are affected by this: - - services.dovecot2 - services.nsd - services.softether - services.strongswan - services.strongswan-swanctl - services.httpd - - - - - - The option has been replaced by a read-only option for each certificate you define. This will be - a subdirectory of /var/lib/acme. You can use this read-only option to figure out where the certificates are stored for a specific certificate. For example, - the option will use this directory option to find the certs for the virtual host. - - - and options have been removed. To execute a service before certificates - are provisioned or renewed add a RequiredBy=acme-${cert}.service to any service. - - - Furthermore, the acme module will not automatically add a dependency on lighttpd.service anymore. If you are using certficates provided by letsencrypt - for lighttpd, then you should depend on the certificate service acme-${cert}.service> manually. - - - For nginx, the dependencies are still automatically managed when is enabled just like before. What changed is that nginx now directly depends on the specific certificates that it needs, - instead of depending on the catch-all acme-certificates.target. This target unit was also removed from the codebase. - This will mean nginx will no longer depend on certificates it isn't explicitly managing and fixes a bug with certificate renewal - ordering racing with nginx restarting which could lead to nginx getting in a broken state as described at - NixOS/nixpkgs#60180. - - - - - The old deprecated emacs package sets have been dropped. - What used to be called emacsPackagesNg is now simply called emacsPackages. - - - - - is now disabled by default if stateVersion is 19.09 or higher. - Previously the xterm desktopManager was enabled when xserver was enabled, but it isn't useful for all people so it didn't make sense to - have any desktopManager enabled default. - - - - - The WeeChat plugin pkgs.weechatScripts.weechat-xmpp has been removed as it doesn't receive - any updates from upstream and depends on outdated Python2-based modules. - - - - - Old unsupported versions (logstash5, - kibana5, - filebeat5, - heartbeat5, - metricbeat5, - packetbeat5) of the ELK-stack and Elastic beats have been removed. - - - - - For NixOS 19.03, both Prometheus 1 and 2 were available to allow for - a seamless transition from version 1 to 2 with existing setups. - Because Prometheus 1 is no longer developed, it was removed. - Prometheus 2 is now configured with services.prometheus. - - - - - Citrix Receiver (citrix_receiver) has been dropped in favor of Citrix Workspace - (citrix_workspace). - - - - - The services.gitlab module has had its literal secret options (, - , - , - , - , - and - ) replaced by file-based versions (, - , - , - , - , - and - ). This was done so that secrets aren't stored - in the world-readable nix store, but means that for each option you'll have to create a file with - the same exact string, add "File" to the end of the option name, and change the definition to a - string pointing to the corresponding file; e.g. services.gitlab.databasePassword = "supersecurepassword" - becomes services.gitlab.databasePasswordFile = "/path/to/secret_file" where the - file secret_file contains the string supersecurepassword. - - - The state path () now has the following restriction: - no parent directory can be owned by any other user than root or the user - specified in ; i.e. if - is set to /var/lib/gitlab/state, gitlab and all parent directories - must be owned by either root or the user specified in . - - - - - The option is unsupported in combination with - in anticipation of defaulting to it. - It has to be set to false and enabled per - interface with - - - - - The Twitter client corebird has been dropped as it is discontinued and does not work against the new Twitter API. - Please use the fork cawbird instead which has been adapted to the API changes and is still maintained. - - - - - The nodejs-11_x package has been removed as it's EOLed by upstream. - - - - - Because of the systemd upgrade, - systemd-timesyncd will no longer work if - is not set correctly. When - upgrading from NixOS 19.03, please make sure that - is set to - "19.03", or lower if the installation dates back to an - earlier version of NixOS. - - - - - Due to the short lifetime of non-LTS kernel releases package attributes like linux_5_1, - linux_5_2 and linux_5_3 have been removed to discourage dependence - on specific non-LTS kernel versions in stable NixOS releases. - - Going forward, versioned attributes like linux_4_9 will exist for LTS versions only. - Please use linux_latest or linux_testing if you depend on non-LTS - releases. Keep in mind that linux_latest and linux_testing will - change versions under the hood during the lifetime of a stable release and might include breaking changes. - - - - - Because of the systemd upgrade, - some network interfaces might change their name. For details see - - upstream docs or - our ticket. - - - -
- -
- Other Notable Changes - - - - - The module gained an option named - which makes the - generated - configuration.nix - 5 manual page include all options - from all NixOS modules included in a given - configuration.nix configuration file. Currently, it is - set to false by default as enabling it frequently - prevents evaluation. But the plan is to eventually have it set to - true by default. Please set it to - true now in your configuration.nix - and fix all the bugs it uncovers. - - - - - The vlc package gained support for Chromecast - streaming, enabled by default. TCP port 8010 must be open for it to work, - so something like networking.firewall.allowedTCPPorts = [ 8010 - ]; may be required in your configuration. Also consider enabling - - Accelerated Video Playback for better transcoding performance. - - - - - The following changes apply if the stateVersion is - changed to 19.09 or higher. For stateVersion = "19.03" - or lower the old behavior is preserved. - - - - - solr.package defaults to - pkgs.solr_8. - - - - - - - The hunspellDicts.fr-any dictionary now ships with fr_FR.{aff,dic} - which is linked to fr-toutesvariantes.{aff,dic}. - - - - - The mysql service now runs as mysql - user. Previously, systemd did execute it as root, and mysql dropped privileges - itself. - This includes ExecStartPre= and - ExecStartPost= phases. - To accomplish that, runtime and data directory setup was delegated to - RuntimeDirectory and tmpfiles. - - - - - With the upgrade to systemd version 242 the systemd-timesyncd - service is no longer using DynamicUser=yes. In order for the - upgrade to work we rely on an activation script to move the state from the old - to the new directory. The older directory (prior 19.09) was - /var/lib/private/systemd/timesync. - - - As long as the system.config.stateVersion is below - 19.09 the state folder will migrated to its proper location - (/var/lib/systemd/timesync), if required. - - - - - The package avahi is now built to look up service - definitions from /etc/avahi/services instead of its - output directory in the nix store. Accordingly the module - now supports custom service definitions via - , which are then placed - in the aforementioned directory. See - avahi.service5 - for more information on custom service definitions. - - - - - Since version 0.1.19, cargo-vendor honors package - includes that are specified in the Cargo.toml - file of Rust crates. rustPlatform.buildRustPackage uses - cargo-vendor to collect and build dependent crates. - Since this change in cargo-vendor changes the set of - vendored files for most Rust packages, the hash that use used to verify - the dependencies, cargoSha256, also changes. - - - The cargoSha256 hashes of all in-tree derivations that - use buildRustPackage have been updated to reflect this - change. However, third-party derivations that use - buildRustPackage may have to be updated as well. - - - - - The consul package was upgraded past version 1.5, - so its deprecated legacy UI is no longer available. - - - - - The default resample-method for PulseAudio has been changed from the upstream default speex-float-1 - to speex-float-5. Be aware that low-powered ARM-based and MIPS-based boards will struggle with this - so you'll need to set back to speex-float-1. - - - - - The phabricator package and associated httpd.extraSubservice, as well as the - phd service have been removed from nixpkgs due to lack of maintainer. - - - - - The mercurial httpd.extraSubservice has been removed from nixpkgs due to lack of maintainer. - - - - - The trac httpd.extraSubservice has been removed from nixpkgs because it was unmaintained. - - - - - The foswiki package and associated httpd.extraSubservice have been removed - from nixpkgs due to lack of maintainer. - - - - - The tomcat-connector httpd.extraSubservice has been removed from nixpkgs. - - - - - It's now possible to change configuration in - services.nextcloud after the initial deploy - since all config parameters are persisted in an additional config file generated by the module. - Previously core configuration like database parameters were set using their imperative - installer after creating /var/lib/nextcloud. - - - - - There exists now lib.forEach, which is like map, but with - arguments flipped. When mapping function body spans many lines (or has nested - maps), it is often hard to follow which list is modified. - - - Previous solution to this problem was either to use lib.flip map - idiom or extract that anonymous mapping function to a named one. Both can still be used - but lib.forEach is preferred over lib.flip map. - - - The /etc/sysctl.d/nixos.conf file containing all the options set via - boot.kernel.sysctl was moved to - /etc/sysctl.d/60-nixos.conf, as - sysctl.d5 - recommends prefixing all filenames in /etc/sysctl.d with a - two-digit number and a dash to simplify the ordering of the files. - - - - - We now install the sysctl snippets shipped with systemd. - - This enables: - - Loose reverse path filtering - - - Source route filtering - - - - fq_codel as a packet scheduler (this helps to fight bufferbloat) - - - - This also configures the kernel to pass core dumps to systemd-coredump, - and restricts the SysRq key combinations to the sync command only. - These sysctl snippets can be found in /etc/sysctl.d/50-*.conf, - and overridden via boot.kernel.sysctl - (which will place the parameters in /etc/sysctl.d/60-nixos.conf). - - - - - Core dumps are now processed by systemd-coredump - by default. systemd-coredump behaviour can - still be modified via - . To stick to the - old behaviour (having the kernel dump to a file called - core in the working directory), without piping - it through systemd-coredump, set - to - false. - - - - - systemd.packages option now also supports generators and - shutdown scripts. Old systemd.generator-packages option has - been removed. - - - - - The rmilter package was removed with associated module and options due deprecation by upstream developer. - Use rspamd in proxy mode instead. - - - - - systemd cgroup accounting via the - systemd.enableCgroupAccounting - option is now enabled by default. It now also enables the more recent Block IO and IP accounting - features. - - - - - We no longer enable custom font rendering settings with by default. - The defaults from fontconfig are sufficient. - - - - - The crashplan package and the - crashplan service have been removed from nixpkgs due to - crashplan shutting down the service, while the crashplansb - package and crashplan-small-business service have been - removed from nixpkgs due to lack of maintainer. - - - The redis module was hardcoded to use the redis user, - /run/redis as runtime directory and - /var/lib/redis as state directory. - Note that the NixOS module for Redis now disables kernel support for Transparent Huge Pages (THP), - because this features causes major performance problems for Redis, - e.g. (https://redis.io/topics/latency). - - - - - Using adds a default emoji font noto-fonts-emoji. - - Users of the following options will have this enabled by default: - - - - - - - - - - - - - - - - - - The altcoins categorization of packages has - been removed. You now access these packages at the top level, - ie. nix-shell -p dogecoin instead of - nix-shell -p altcoins.dogecoin, etc. - - - - - Ceph has been upgraded to v14.2.1. - See the release notes for details. - The mgr dashboard as well as osds backed by loop-devices is no longer explicitly supported by the package and module. - Note: There's been some issues with python-cherrypy, which is used by the dashboard - and prometheus mgr modules (and possibly others), hence 0000-dont-check-cherrypy-version.patch. - - - - - pkgs.weechat is now compiled against pkgs.python3. - Weechat also recommends to use Python3 - in their docs. - - - -
-
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2003.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2003.section.md new file mode 100644 index 0000000000..b92c7f6634 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2003.section.md @@ -0,0 +1,507 @@ +# Release 20.03 ("Markhor", 2020.04/20) {#sec-release-20.03} + +## Highlights {#sec-release-20.03-highlights} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- Support is planned until the end of October 2020, handing over to 20.09. + +- Core version changes: + + gcc: 8.3.0 -\> 9.2.0 + + glibc: 2.27 -\> 2.30 + + linux: 4.19 -\> 5.4 + + mesa: 19.1.5 -\> 19.3.3 + + openssl: 1.0.2u -\> 1.1.1d + +- Desktop version changes: + + plasma5: 5.16.5 -\> 5.17.5 + + kdeApplications: 19.08.2 -\> 19.12.3 + + gnome3: 3.32 -\> 3.34 + + pantheon: 5.0 -\> 5.1.3 + +- Linux kernel is updated to branch 5.4 by default (from 4.19). + +- Grub is updated to 2.04, adding support for booting from F2FS filesystems and Btrfs volumes using zstd compression. Note that some users have been unable to boot after upgrading to 2.04 - for more information, please see [this discussion](https://github.com/NixOS/nixpkgs/issues/61718#issuecomment-617618503). + +- Postgresql for NixOS service now defaults to v11. + +- The graphical installer image starts the graphical session automatically. Before you\'d be greeted by a tty and asked to enter `systemctl start display-manager`. It is now possible to disable the display-manager from running by selecting the `Disable display-manager` quirk in the boot menu. + +- GNOME 3 has been upgraded to 3.34. Please take a look at their [Release Notes](https://help.gnome.org/misc/release-notes/3.34) for details. + +- If you enable the Pantheon Desktop Manager via [services.xserver.desktopManager.pantheon.enable](options.html#opt-services.xserver.desktopManager.pantheon.enable), we now default to also use [ Pantheon\'s newly designed greeter ](https://blog.elementary.io/say-hello-to-the-new-greeter/). Contrary to NixOS\'s usual update policy, Pantheon will receive updates during the cycle of NixOS 20.03 when backwards compatible. + +- By default zfs pools will now be trimmed on a weekly basis. Trimming is only done on supported devices (i.e. NVME or SSDs) and should improve throughput and lifetime of these devices. It is controlled by the `services.zfs.trim.enable` varname. The zfs scrub service (`services.zfs.autoScrub.enable`) and the zfs autosnapshot service (`services.zfs.autoSnapshot.enable`) are now only enabled if zfs is set in `config.boot.initrd.supportedFilesystems` or `config.boot.supportedFilesystems`. These lists will automatically contain zfs as soon as any zfs mountpoint is configured in `fileSystems`. + +- `nixos-option` has been rewritten in C++, speeding it up, improving correctness, and adding a `-r` option which prints all options and their values recursively. + +- `services.xserver.desktopManager.default` and `services.xserver.windowManager.default` options were replaced by a single [services.xserver.displayManager.defaultSession](options.html#opt-services.xserver.displayManager.defaultSession) option to improve support for upstream session files. If you used something like: + + ```nix + { + services.xserver.desktopManager.default = "xfce"; + services.xserver.windowManager.default = "icewm"; + } + ``` + + you should change it to: + + ```nix + { + services.xserver.displayManager.defaultSession = "xfce+icewm"; + } + ``` + +- The testing driver implementation in NixOS is now in Python `make-test-python.nix`. This was done by Jacek Galowicz ([\@tfc](https://github.com/tfc)), and with the collaboration of Julian Stecklina ([\@blitz](https://github.com/blitz)) and Jana Traue ([\@jtraue](https://github.com/jtraue)). All documentation has been updated to use this testing driver, and a vast majority of the 286 tests in NixOS were ported to python driver. In 20.09 the Perl driver implementation, `make-test.nix`, is slated for removal. This should give users of the NixOS integration framework a transitory period to rewrite their tests to use the Python implementation. Users of the Perl driver will see this warning everytime they use it: + + ```ShellSession + $ warning: Perl VM tests are deprecated and will be removed for 20.09. + Please update your tests to use the python test driver. + See https://github.com/NixOS/nixpkgs/pull/71684 for details. + ``` + + API compatibility is planned to be kept for at least the next release with the perl driver. + +## New Services {#sec-release-20.03-new-services} + +The following new services were added since the last release: + +- The kubernetes kube-proxy now supports a new hostname configuration `services.kubernetes.proxy.hostname` which has to be set if the hostname of the node should be non default. + +- UPower\'s configuration is now managed by NixOS and can be customized via `services.upower`. + +- To use Geary you should enable [programs.geary.enable](options.html#opt-programs.geary.enable) instead of just adding it to [environment.systemPackages](options.html#opt-environment.systemPackages). It was created so Geary could function properly outside of GNOME. + +- `./config/console.nix` + +- `./hardware/brillo.nix` + +- `./hardware/tuxedo-keyboard.nix` + +- `./programs/bandwhich.nix` + +- `./programs/bash-my-aws.nix` + +- `./programs/liboping.nix` + +- `./programs/traceroute.nix` + +- `./services/backup/sanoid.nix` + +- `./services/backup/syncoid.nix` + +- `./services/backup/zfs-replication.nix` + +- `./services/continuous-integration/buildkite-agents.nix` + +- `./services/databases/victoriametrics.nix` + +- `./services/desktops/gnome3/gnome-initial-setup.nix` + +- `./services/desktops/neard.nix` + +- `./services/games/openarena.nix` + +- `./services/hardware/fancontrol.nix` + +- `./services/mail/sympa.nix` + +- `./services/misc/freeswitch.nix` + +- `./services/misc/mame.nix` + +- `./services/monitoring/do-agent.nix` + +- `./services/monitoring/prometheus/xmpp-alerts.nix` + +- `./services/network-filesystems/orangefs/server.nix` + +- `./services/network-filesystems/orangefs/client.nix` + +- `./services/networking/3proxy.nix` + +- `./services/networking/corerad.nix` + +- `./services/networking/go-shadowsocks2.nix` + +- `./services/networking/ntp/openntpd.nix` + +- `./services/networking/shorewall.nix` + +- `./services/networking/shorewall6.nix` + +- `./services/networking/spacecookie.nix` + +- `./services/networking/trickster.nix` + +- `./services/networking/v2ray.nix` + +- `./services/networking/xandikos.nix` + +- `./services/networking/yggdrasil.nix` + +- `./services/web-apps/dokuwiki.nix` + +- `./services/web-apps/gotify-server.nix` + +- `./services/web-apps/grocy.nix` + +- `./services/web-apps/ihatemoney` + +- `./services/web-apps/moinmoin.nix` + +- `./services/web-apps/trac.nix` + +- `./services/web-apps/trilium.nix` + +- `./services/web-apps/shiori.nix` + +- `./services/web-servers/ttyd.nix` + +- `./services/x11/picom.nix` + +- `./services/x11/hardware/digimend.nix` + +- `./services/x11/imwheel.nix` + +- `./virtualisation/cri-o.nix` + +## Backward Incompatibilities {#sec-release-20.03-incompatibilities} + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- The dhcpcd package [ does not request IPv4 addresses for tap and bridge interfaces anymore by default](https://roy.marples.name/archives/dhcpcd-discuss/0002621.html). In order to still get an address on a bridge interface, one has to disable `networking.useDHCP` and explicitly enable `networking.interfaces..useDHCP` on every interface, that should get an address via DHCP. This way, dhcpcd is configured in an explicit way about which interface to run on. + +- GnuPG is now built without support for a graphical passphrase entry by default. Please enable the `gpg-agent` user service via the NixOS option `programs.gnupg.agent.enable`. Note that upstream recommends using `gpg-agent` and will spawn a `gpg-agent` on the first invocation of GnuPG anyway. + +- The `dynamicHosts` option has been removed from the [NetworkManager](options.html#opt-networking.networkmanager.enable) module. Allowing (multiple) regular users to override host entries affecting the whole system opens up a huge attack vector. There seem to be very rare cases where this might be useful. Consider setting system-wide host entries using [networking.hosts](options.html#opt-networking.hosts), provide them via the DNS server in your network, or use [environment.etc](options.html#opt-environment.etc) to add a file into `/etc/NetworkManager/dnsmasq.d` reconfiguring `hostsdir`. + +- The `99-main.network` file was removed. Matching all network interfaces caused many breakages, see [\#18962](https://github.com/NixOS/nixpkgs/pull/18962) and [\#71106](https://github.com/NixOS/nixpkgs/pull/71106). + + We already don\'t support the global [networking.useDHCP](options.html#opt-networking.useDHCP), [networking.defaultGateway](options.html#opt-networking.defaultGateway) and [networking.defaultGateway6](options.html#opt-networking.defaultGateway6) options if [networking.useNetworkd](options.html#opt-networking.useNetworkd) is enabled, but direct users to configure the per-device [networking.interfaces.\....](options.html#opt-networking.interfaces) options. + +- The stdenv now runs all bash with `set -u`, to catch the use of undefined variables. Before, it itself used `set -u` but was careful to unset it so other packages\' code ran as before. Now, all bash code is held to the same high standard, and the rather complex stateful manipulation of the options can be discarded. + +- The SLIM Display Manager has been removed, as it has been unmaintained since 2013. Consider migrating to a different display manager such as LightDM (current default in NixOS), SDDM, GDM, or using the startx module which uses Xinitrc. + +- The Way Cooler wayland compositor has been removed, as the project has been officially canceled. There are no more `way-cooler` attribute and `programs.way-cooler` options. + +- The BEAM package set has been deleted. You will only find there the different interpreters. You should now use the different build tools coming with the languages with sandbox mode disabled. + +- There is now only one Xfce package-set and module. This means that attributes `xfce4-14` and `xfceUnstable` all now point to the latest Xfce 4.14 packages. And in the future NixOS releases will be the latest released version of Xfce available at the time of the release\'s development (if viable). + +- The [phpfpm](options.html#opt-services.phpfpm.pools) module now sets `PrivateTmp=true` in its systemd units for better process isolation. If you rely on `/tmp` being shared with other services, explicitly override this by setting `serviceConfig.PrivateTmp` to `false` for each phpfpm unit. + +- KDE's old multimedia framework Phonon no longer supports Qt 4. For that reason, Plasma desktop also does not have `enableQt4Support` option any more. + +- The BeeGFS module has been removed. + +- The osquery module has been removed. + +- Going forward, `~/bin` in the users home directory will no longer be in `PATH` by default. If you depend on this you should set the option `environment.homeBinInPath` to `true`. The aforementioned option was added this release. + +- The `buildRustCrate` infrastructure now produces `lib` outputs in addition to the `out` output. This has led to drastically reduced closure sizes for some rust crates since development dependencies are now in the `lib` output. + +- Pango was upgraded to 1.44, which no longer uses freetype for font loading. This means that type1 and bitmap fonts are no longer supported in applications relying on Pango for font rendering (notably, GTK application). See [ upstream issue](https://gitlab.gnome.org/GNOME/pango/issues/386) for more information. + +- The `roundcube` module has been hardened. + + - The password of the database is not written world readable in the store any more. If `database.host` is set to `localhost`, then a unix user of the same name as the database will be created and PostreSQL peer authentication will be used, removing the need for a password. Otherwise, a password is still needed and can be provided with the new option `database.passwordFile`, which should be set to the path of a file containing the password and readable by the user `nginx` only. The `database.password` option is insecure and deprecated. Usage of this option will print a warning. + + - A random `des_key` is set by default in the configuration of roundcube, instead of using the hardcoded and insecure default. To ensure a clean migration, all users will be logged out when you upgrade to this release. + +- The packages `openobex` and `obexftp` are no longer installed when enabling Bluetooth via `hardware.bluetooth.enable`. + +- The `dump1090` derivation has been changed to use FlightAware\'s dump1090 as its upstream. However, this version does not have an internal webserver anymore. The assets in the `share/dump1090` directory of the derivation can be used in conjunction with an external webserver to replace this functionality. + +- The fourStore and fourStoreEndpoint modules have been removed. + +- Polkit no longer has the user of uid 0 (root) as an admin identity. We now follow the upstream default of only having every member of the wheel group admin privileged. Before it was root and members of wheel. The positive outcome of this is pkexec GUI popups or terminal prompts will no longer require the user to choose between two essentially equivalent choices (whether to perform the action as themselves with wheel permissions, or as the root user). + +- NixOS containers no longer build NixOS manual by default. This saves evaluation time, especially if there are many declarative containers defined. Note that this is already done when `` module is included in container config. + +- The `kresd` services deprecates the `interfaces` option in favor of the `listenPlain` option which requires full [systemd.socket compatible](https://www.freedesktop.org/software/systemd/man/systemd.socket.html#ListenStream=) declaration which always include a port. + +- Virtual console options have been reorganized and can be found under a single top-level attribute: `console`. The full set of changes is as follows: + + - `i18n.consoleFont` renamed to [console.font](options.html#opt-console.font) + + - `i18n.consoleKeyMap` renamed to [console.keyMap](options.html#opt-console.keyMap) + + - `i18n.consoleColors` renamed to [console.colors](options.html#opt-console.colors) + + - `i18n.consolePackages` renamed to [console.packages](options.html#opt-console.packages) + + - `i18n.consoleUseXkbConfig` renamed to [console.useXkbConfig](options.html#opt-console.useXkbConfig) + + - `boot.earlyVconsoleSetup` renamed to [console.earlySetup](options.html#opt-console.earlySetup) + + - `boot.extraTTYs` renamed to `console.extraTTYs`. + +- The [awstats](options.html#opt-services.awstats.enable) module has been rewritten to serve stats via static html pages, updated on a timer, over [nginx](options.html#opt-services.nginx.virtualHosts), instead of dynamic cgi pages over [apache](options.html#opt-services.httpd.enable). + + Minor changes will be required to migrate existing configurations. Details of the required changes can seen by looking through the [awstats](options.html#opt-services.awstats.enable) module. + +- The httpd module no longer provides options to support serving web content without defining a virtual host. As a result of this the [services.httpd.logPerVirtualHost](options.html#opt-services.httpd.logPerVirtualHost) option now defaults to `true` instead of `false`. Please update your configuration to make use of [services.httpd.virtualHosts](options.html#opt-services.httpd.virtualHosts). + + The [services.httpd.virtualHosts.\](options.html#opt-services.httpd.virtualHosts) option has changed type from a list of submodules to an attribute set of submodules, better matching [services.nginx.virtualHosts.\](options.html#opt-services.nginx.virtualHosts). + + This change comes with the addition of the following options which mimic the functionality of their `nginx` counterparts: [services.httpd.virtualHosts.\.addSSL](options.html#opt-services.httpd.virtualHosts), [services.httpd.virtualHosts.\.forceSSL](options.html#opt-services.httpd.virtualHosts), [services.httpd.virtualHosts.\.onlySSL](options.html#opt-services.httpd.virtualHosts), [services.httpd.virtualHosts.\.enableACME](options.html#opt-services.httpd.virtualHosts), [services.httpd.virtualHosts.\.acmeRoot](options.html#opt-services.httpd.virtualHosts), and [services.httpd.virtualHosts.\.useACMEHost](options.html#opt-services.httpd.virtualHosts). + +- For NixOS configuration options, the `loaOf` type has been deprecated and will be removed in a future release. In nixpkgs, options of this type will be changed to `attrsOf` instead. If you were using one of these in your configuration, you will see a warning suggesting what changes will be required. + + For example, [users.users](options.html#opt-users.users) is a `loaOf` option that is commonly used as follows: + + ```nix + { + users.users = + [ { name = "me"; + description = "My personal user."; + isNormalUser = true; + } + ]; + } + ``` + + This should be rewritten by removing the list and using the value of `name` as the name of the attribute set: + + ```nix + { + users.users.me = + { description = "My personal user."; + isNormalUser = true; + }; + } + ``` + + For more information on this change have look at these links: [issue \#1800](https://github.com/NixOS/nixpkgs/issues/1800), [PR \#63103](https://github.com/NixOS/nixpkgs/pull/63103). + +- For NixOS modules, the types `types.submodule` and `types.submoduleWith` now support paths as allowed values, similar to how `imports` supports paths. Because of this, if you have a module that defines an option of type `either (submodule ...) path`, it will break since a path is now treated as the first type instead of the second. To fix this, change the type to `either path (submodule ...)`. + +- The [Buildkite Agent](options.html#opt-services.buildkite-agents) module and corresponding packages have been updated to 3.x, and to support multiple instances of the agent running at the same time. This means you will have to rename `services.buildkite-agent` to `services.buildkite-agents.`. Furthermore, the following options have been changed: + + - `services.buildkite-agent.meta-data` has been renamed to [services.buildkite-agents.\.tags](options.html#opt-services.buildkite-agents), to match upstreams naming for 3.x. Its type has also changed - it now accepts an attrset of strings. + + - The`services.buildkite-agent.openssh.publicKeyPath` option has been removed, as it\'s not necessary to deploy public keys to clone private repositories. + + - `services.buildkite-agent.openssh.privateKeyPath` has been renamed to [buildkite-agents.\.privateSshKeyPath](options.html#opt-services.buildkite-agents), as the whole `openssh` now only contained that single option. + + - [services.buildkite-agents.\.shell](options.html#opt-services.buildkite-agents) has been introduced, allowing to specify a custom shell to be used. + +- The `citrix_workspace_19_3_0` package has been removed as it will be EOLed within the lifespan of 20.03. For further information, please refer to the [support and maintenance information](https://www.citrix.com/de-de/support/product-lifecycle/milestones/receiver.html) from upstream. + +- The `gcc5` and `gfortran5` packages have been removed. + +- The `services.xserver.displayManager.auto` module has been removed. It was only intended for use in internal NixOS tests, and gave the false impression of it being a special display manager when it\'s actually LightDM. Please use the `services.xserver.displayManager.lightdm.autoLogin` options instead, or any other display manager in NixOS as they all support auto-login. If you used this module specifically because it permitted root auto-login you can override the lightdm-autologin pam module like: + + ```nix + { + security.pam.services.lightdm-autologin.text = lib.mkForce '' + auth requisite pam_nologin.so + auth required pam_succeed_if.so quiet + auth required pam_permit.so + + account include lightdm + + password include lightdm + + session include lightdm + ''; + } + ``` + + The difference is the: + + ``` + auth required pam_succeed_if.so quiet + ``` + + line, where default it\'s: + + ``` + auth required pam_succeed_if.so uid >= 1000 quiet + ``` + + not permitting users with uid\'s below 1000 (like root). All other display managers in NixOS are configured like this. + +- There have been lots of improvements to the Mailman module. As a result, + + - The `services.mailman.hyperkittyBaseUrl` option has been renamed to [services.mailman.hyperkitty.baseUrl](options.html#opt-services.mailman.hyperkitty.baseUrl). + + - The `services.mailman.hyperkittyApiKey` option has been removed. This is because having an option for the Hyperkitty API key meant that the API key would be stored in the world-readable Nix store, which was a security vulnerability. A new Hyperkitty API key will be generated the first time the new Hyperkitty service is run, and it will then be persisted outside of the Nix store. To continue using Hyperkitty, you must set [services.mailman.hyperkitty.enable](options.html#opt-services.mailman.hyperkitty.enable) to `true`. + + - Additionally, some Postfix configuration must now be set manually instead of automatically by the Mailman module: + + ```nix + { + services.postfix.relayDomains = [ "hash:/var/lib/mailman/data/postfix_domains" ]; + services.postfix.config.transport_maps = [ "hash:/var/lib/mailman/data/postfix_lmtp" ]; + services.postfix.config.local_recipient_maps = [ "hash:/var/lib/mailman/data/postfix_lmtp" ]; + } + ``` + + This is because some users may want to include other values in these lists as well, and this was not possible if they were set automatically by the Mailman module. It would not have been possible to just concatenate values from multiple modules each setting the values they needed, because the order of elements in the list is significant. + +- The LLVM versions 3.5, 3.9 and 4 (including the corresponding CLang versions) have been dropped. + +- The `networking.interfaces.*.preferTempAddress` option has been replaced by `networking.interfaces.*.tempAddress`. The new option allows better control of the IPv6 temporary addresses, including completely disabling them for interfaces where they are not needed. + +- Rspamd was updated to version 2.2. Read [ the upstream migration notes](https://rspamd.com/doc/migration.html#migration-to-rspamd-20) carefully. Please be especially aware that some modules were removed and the default Bayes backend is now Redis. + +- The `*psu` versions of oraclejdk8 have been removed as they aren\'t provided by upstream anymore. + +- The `services.dnscrypt-proxy` module has been removed as it used the deprecated version of dnscrypt-proxy. We\'ve added [services.dnscrypt-proxy2.enable](options.html#opt-services.dnscrypt-proxy2.enable) to use the supported version. This module supports configuration via the Nix attribute set [services.dnscrypt-proxy2.settings](options.html#opt-services.dnscrypt-proxy2.settings), or by passing a TOML configuration file via [services.dnscrypt-proxy2.configFile](options.html#opt-services.dnscrypt-proxy2.configFile). + + ```nix + { + # Example configuration: + services.dnscrypt-proxy2.enable = true; + services.dnscrypt-proxy2.settings = { + listen_addresses = [ "127.0.0.1:43" ]; + sources.public-resolvers = { + urls = [ "https://download.dnscrypt.info/resolvers-list/v2/public-resolvers.md" ]; + cache_file = "public-resolvers.md"; + minisign_key = "RWQf6LRCGA9i53mlYecO4IzT51TGPpvWucNSCh1CBM0QTaLn73Y7GFO3"; + refresh_delay = 72; + }; + }; + + services.dnsmasq.enable = true; + services.dnsmasq.servers = [ "127.0.0.1#43" ]; + } + ``` + +- `qesteidutil` has been deprecated in favor of `qdigidoc`. + +- sqldeveloper_18 has been removed as it\'s not maintained anymore, sqldeveloper has been updated to version `19.4`. Please note that this means that this means that the oraclejdk is now required. For further information please read the [release notes](https://www.oracle.com/technetwork/developer-tools/sql-developer/downloads/sqldev-relnotes-194-5908846.html). + +- Haskell `env` and `shellFor` dev shell environments now organize dependencies the same way as regular builds. In particular, rather than receiving all the different lists of dependencies mashed together as one big list, and then partitioning into Haskell and non-Hakell dependencies, they work from the original many different dependency parameters and don\'t need to algorithmically partition anything. + + This means that if you incorrectly categorize a dependency, e.g. non-Haskell library dependency as a `buildDepends` or run-time Haskell dependency as a `setupDepends`, whereas things would have worked before they may not work now. + +- The gcc-snapshot-package has been removed. It\'s marked as broken for \>2 years and used to point to a fairly old snapshot from the gcc7-branch. + +- The nixos-build-vms8 -script now uses the python test-driver. + +- The riot-web package now accepts configuration overrides as an attribute set instead of a string. A formerly used JSON configuration can be converted to an attribute set with `builtins.fromJSON`. + + The new default configuration also disables automatic guest account registration and analytics to improve privacy. The previous behavior can be restored by setting `config.riot-web.conf = { disable_guests = false; piwik = true; }`. + +- Stand-alone usage of `Upower` now requires `services.upower.enable` instead of just installing into [environment.systemPackages](options.html#opt-environment.systemPackages). + +- nextcloud has been updated to `v18.0.2`. This means that users from NixOS 19.09 can\'t upgrade directly since you can only move one version forward and 19.09 uses `v16.0.8`. + + To provide a safe upgrade-path and to circumvent similar issues in the future, the following measures were taken: + + - The pkgs.nextcloud-attribute has been removed and replaced with versioned attributes (currently pkgs.nextcloud17 and pkgs.nextcloud18). With this change major-releases can be backported without breaking stuff and to make upgrade-paths easier. + + - Existing setups will be detected using [system.stateVersion](options.html#opt-system.stateVersion): by default, nextcloud17 will be used, but will raise a warning which notes that after that deploy it\'s recommended to update to the latest stable version (nextcloud18) by declaring the newly introduced setting [services.nextcloud.package](options.html#opt-services.nextcloud.package). + + - Users with an overlay (e.g. to use nextcloud at version `v18` on `19.09`) will get an evaluation error by default. This is done to ensure that our [package](options.html#opt-services.nextcloud.package)-option doesn\'t select an older version by accident. It\'s recommended to use pkgs.nextcloud18 or to set [package](options.html#opt-services.nextcloud.package) to pkgs.nextcloud explicitly. + + ::: {.warning} + Please note that if you\'re coming from `19.03` or older, you have to manually upgrade to `19.09` first to upgrade your server to Nextcloud v16. + ::: + +- Hydra has gained a massive performance improvement due to [some database schema changes](https://github.com/NixOS/hydra/pull/710) by adding several IDs and better indexing. However, it\'s necessary to upgrade Hydra in multiple steps: + + - At first, an older version of Hydra needs to be deployed which adds those (nullable) columns. When having set [stateVersion ](options.html#opt-system.stateVersion) to a value older than `20.03`, this package will be selected by default from the module when upgrading. Otherwise, the package can be deployed using the following config: + + ```nix + { pkgs, ... }: { + services.hydra.package = pkgs.hydra-migration; + } + ``` + +- Automatically fill the newly added ID columns on the server by running the following command: + + ```ShellSession + $ hydra-backfill-ids + ``` + ::: {.warning} + Please note that this process can take a while depending on your database-size! + ::: + +- Deploy a newer version of Hydra to activate the DB optimizations. This can be done by using hydra-unstable. This package already includes [flake-support](https://github.com/nixos/rfcs/pull/49) and is therefore compiled against pkgs.nixFlakes. + + ::: {.warning} + If your [stateVersion](options.html#opt-system.stateVersion) is set to `20.03` or greater, hydra-unstable will be used automatically! This will break your setup if you didn\'t run the migration. + ::: + + Please note that Hydra is currently not available with nixStable as this doesn\'t compile anymore. + + ::: {.warning} + pkgs.hydra has been removed to ensure a graceful database-migration using the dedicated package-attributes. If you still have pkgs.hydra defined in e.g. an overlay, an assertion error will be thrown. To circumvent this, you need to set [services.hydra.package](options.html#opt-services.hydra.package) to pkgs.hydra explicitly and make sure you know what you\'re doing! + ::: + +- The TokuDB storage engine will be disabled in mariadb 10.5. It is recommended to switch to RocksDB. See also [TokuDB](https://mariadb.com/kb/en/tokudb/). + +## Other Notable Changes {#sec-release-20.03-notable-changes} + +- SD images are now compressed by default using `bzip2`. + +- The nginx web server previously started its master process as root privileged, then ran worker processes as a less privileged identity user (the `nginx` user). This was changed to start all of nginx as a less privileged user (defined by `services.nginx.user` and `services.nginx.group`). As a consequence, all files that are needed for nginx to run (included configuration fragments, SSL certificates and keys, etc.) must now be readable by this less privileged user/group. + + To continue to use the old approach, you can configure: + + ```nix + { + services.nginx.appendConfig = let cfg = config.services.nginx; in ''user ${cfg.user} ${cfg.group};''; + systemd.services.nginx.serviceConfig.User = lib.mkForce "root"; + } + ``` + +- OpenSSH has been upgraded from 7.9 to 8.1, improving security and adding features but with potential incompatibilities. Consult the [ release announcement](https://www.openssh.com/txt/release-8.1) for more information. + +- `PRETTY_NAME` in `/etc/os-release` now uses the short rather than full version string. + +- The ACME module has switched from simp-le to [lego](https://github.com/go-acme/lego) which allows us to support DNS-01 challenges and wildcard certificates. The following options have been added: [security.acme.acceptTerms](options.html#opt-security.acme.acceptTerms), [security.acme.certs.\.dnsProvider](options.html#opt-security.acme.certs), [security.acme.certs.\.credentialsFile](options.html#opt-security.acme.certs), [security.acme.certs.\.dnsPropagationCheck](options.html#opt-security.acme.certs). As well as this, the options `security.acme.acceptTerms` and either `security.acme.email` or `security.acme.certs..email` must be set in order to use the ACME module. Certificates will be regenerated on activation, no account or certificate will be migrated from simp-le. In particular private keys will not be preserved. However, the credentials for simp-le are preserved and thus it is possible to roll back to previous versions without breaking certificate generation. Note also that in contrary to simp-le a new private key is recreated at each renewal by default, which can have consequences if you embed your public key in apps. + +- It is now possible to unlock LUKS-Encrypted file systems using a FIDO2 token via `boot.initrd.luks.fido2Support`. + +- Predictably named network interfaces get renamed in stage-1. This means that it is possible to use the proper interface name for e.g. Dropbear setups. + + For further reference, please read [\#68953](https://github.com/NixOS/nixpkgs/pull/68953) or the corresponding [discourse thread](https://discourse.nixos.org/t/predictable-network-interface-names-in-initrd/4055). + +- The matrix-synapse-package has been updated to [v1.11.1](https://github.com/matrix-org/synapse/releases/tag/v1.11.1). Due to [stricter requirements](https://github.com/matrix-org/synapse/releases/tag/v1.10.0rc1) for database configuration when using postgresql, the automated database setup of the module has been removed to avoid any further edge-cases. + + matrix-synapse expects `postgresql`-databases to have the options `LC_COLLATE` and `LC_CTYPE` set to [`'C'`](https://www.postgresql.org/docs/12/locale.html) which basically instructs `postgresql` to ignore any locale-based preferences. + + Depending on your setup, you need to incorporate one of the following changes in your setup to upgrade to 20.03: + + - If you use `sqlite3` you don\'t need to do anything. + + - If you use `postgresql` on a different server, you don\'t need to change anything as well since this module was never designed to configure remote databases. + + - If you use `postgresql` and configured your synapse initially on `19.09` or older, you simply need to enable postgresql-support explicitly: + + ```nix + { ... }: { + services.matrix-synapse = { + enable = true; + /* and all the other config you've defined here */ + }; + services.postgresql.enable = true; + } + ``` + +- If you deploy a fresh matrix-synapse, you need to configure the database yourself (e.g. by using the [services.postgresql.initialScript](options.html#opt-services.postgresql.initialScript) option). An example for this can be found in the [documentation of the Matrix module](#module-services-matrix). + +- If you initially deployed your matrix-synapse on `nixos-unstable` _after_ the `19.09`-release, your database is misconfigured due to a regression in NixOS. For now, matrix-synapse will startup with a warning, but it\'s recommended to reconfigure the database to set the values `LC_COLLATE` and `LC_CTYPE` to [`'C'`](https://www.postgresql.org/docs/12/locale.html). + +- The [systemd.network.links](options.html#opt-systemd.network.links) option is now respected even when [systemd-networkd](options.html#opt-systemd.network.enable) is disabled. This mirrors the behaviour of systemd - It\'s udev that parses `.link` files, not `systemd-networkd`. + +- mongodb has been updated to version `3.4.24`. + + ::: {.warning} + Please note that mongodb has been relicensed under their own [` sspl`](https://www.mongodb.com/licensing/server-side-public-license/faq)-license. Since it\'s not entirely free and not OSI-approved, it\'s listed as non-free. This means that Hydra doesn\'t provide prebuilt mongodb-packages and needs to be built locally. + ::: diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2003.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2003.xml deleted file mode 100644 index 4206f44f6c..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2003.xml +++ /dev/null @@ -1,1252 +0,0 @@ -
- Release 20.03 (“Markhor”, 2020.04/20) - -
- Highlights - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - - - Support is planned until the end of October 2020, handing over to 20.09. - - - - Core version changes: - gcc: 8.3.0 -> 9.2.0 - glibc: 2.27 -> 2.30 - linux: 4.19 -> 5.4 - mesa: 19.1.5 -> 19.3.3 - openssl: 1.0.2u -> 1.1.1d - - - Desktop version changes: - plasma5: 5.16.5 -> 5.17.5 - kdeApplications: 19.08.2 -> 19.12.3 - gnome3: 3.32 -> 3.34 - pantheon: 5.0 -> 5.1.3 - - - - Linux kernel is updated to branch 5.4 by default (from 4.19). - - - - - Grub is updated to 2.04, adding support for booting from F2FS filesystems and - Btrfs volumes using zstd compression. Note that some users have been unable -to boot after upgrading to 2.04 - for more information, please see this - discussion. - - - - - Postgresql for NixOS service now defaults to v11. - - - - - The graphical installer image starts the graphical session automatically. - Before you'd be greeted by a tty and asked to enter systemctl start display-manager. - It is now possible to disable the display-manager from running by selecting the Disable display-manager - quirk in the boot menu. - - - - - GNOME 3 has been upgraded to 3.34. Please take a look at their - Release Notes - for details. - - - - - If you enable the Pantheon Desktop Manager via - , we now default to also use - - Pantheon's newly designed greeter - . - Contrary to NixOS's usual update policy, Pantheon will receive updates during the cycle of - NixOS 20.03 when backwards compatible. - - - - - By default zfs pools will now be trimmed on a weekly basis. - Trimming is only done on supported devices (i.e. NVME or SSDs) - and should improve throughput and lifetime of these devices. - It is controlled by the services.zfs.trim.enable varname. - The zfs scrub service (services.zfs.autoScrub.enable) - and the zfs autosnapshot service (services.zfs.autoSnapshot.enable) - are now only enabled if zfs is set in config.boot.initrd.supportedFilesystems or - config.boot.supportedFilesystems. These lists will automatically contain - zfs as soon as any zfs mountpoint is configured in fileSystems. - - - - - nixos-option has been rewritten in C++, speeding it up, improving correctness, - and adding a option which prints all options and their values recursively. - - - - - and options were replaced by a single option to improve support for upstream session files. If you used something like: - -services.xserver.desktopManager.default = "xfce"; -services.xserver.windowManager.default = "icewm"; - - you should change it to: - -services.xserver.displayManager.defaultSession = "xfce+icewm"; - - - - - - The testing driver implementation in NixOS is now in Python make-test-python.nix. - This was done by Jacek Galowicz (@tfc), and with the - collaboration of Julian Stecklina (@blitz) and - Jana Traue (@jtraue). All documentation has been updated to use this - testing driver, and a vast majority of the 286 tests in NixOS were ported to python driver. In 20.09 the Perl driver implementation, - make-test.nix, is slated for removal. This should give users of the NixOS integration framework - a transitory period to rewrite their tests to use the Python implementation. Users of the Perl driver will see - this warning everytime they use it: - -$ warning: Perl VM tests are deprecated and will be removed for 20.09. -Please update your tests to use the python test driver. -See https://github.com/NixOS/nixpkgs/pull/71684 for details. - - API compatibility is planned to be kept for at least the next release with the perl driver. - - - -
- -
- New Services - - - The following new services were added since the last release: - - - - - - The kubernetes kube-proxy now supports a new hostname configuration - services.kubernetes.proxy.hostname which has to - be set if the hostname of the node should be non default. - - - - - UPower's configuration is now managed by NixOS and can be customized - via . - - - - - To use Geary you should enable instead of - just adding it to . - It was created so Geary could function properly outside of GNOME. - - - - - ./config/console.nix - - - - - ./hardware/brillo.nix - - - - - ./hardware/tuxedo-keyboard.nix - - - - - ./programs/bandwhich.nix - - - - - ./programs/bash-my-aws.nix - - - - - ./programs/liboping.nix - - - - - ./programs/traceroute.nix - - - - - ./services/backup/sanoid.nix - - - - - ./services/backup/syncoid.nix - - - - - ./services/backup/zfs-replication.nix - - - - - ./services/continuous-integration/buildkite-agents.nix - - - - - ./services/databases/victoriametrics.nix - - - - - ./services/desktops/gnome3/gnome-initial-setup.nix - - - - - ./services/desktops/neard.nix - - - - - ./services/games/openarena.nix - - - - - ./services/hardware/fancontrol.nix - - - - - ./services/mail/sympa.nix - - - - - ./services/misc/freeswitch.nix - - - - - ./services/misc/mame.nix - - - - - ./services/monitoring/do-agent.nix - - - - - ./services/monitoring/prometheus/xmpp-alerts.nix - - - - - ./services/network-filesystems/orangefs/server.nix - - - - - ./services/network-filesystems/orangefs/client.nix - - - - - ./services/networking/3proxy.nix - - - - - ./services/networking/corerad.nix - - - - - ./services/networking/go-shadowsocks2.nix - - - - - ./services/networking/ntp/openntpd.nix - - - - - ./services/networking/shorewall.nix - - - - - ./services/networking/shorewall6.nix - - - - - ./services/networking/spacecookie.nix - - - - - ./services/networking/trickster.nix - - - - - ./services/networking/v2ray.nix - - - - - ./services/networking/xandikos.nix - - - - - ./services/networking/yggdrasil.nix - - - - - ./services/web-apps/dokuwiki.nix - - - - - ./services/web-apps/gotify-server.nix - - - - - ./services/web-apps/grocy.nix - - - - - ./services/web-apps/ihatemoney - - - - - ./services/web-apps/moinmoin.nix - - - - - ./services/web-apps/trac.nix - - - - - ./services/web-apps/trilium.nix - - - - - ./services/web-apps/shiori.nix - - - - - ./services/web-servers/ttyd.nix - - - - - ./services/x11/picom.nix - - - - - ./services/x11/hardware/digimend.nix - - - - - ./services/x11/imwheel.nix - - - - - ./virtualisation/cri-o.nix - - - - -
- -
- Backward Incompatibilities - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - - The dhcpcd package - does not request IPv4 addresses for tap and bridge interfaces anymore by default. - In order to still get an address on a bridge interface, one has to disable - networking.useDHCP and explicitly enable - networking.interfaces.<name>.useDHCP on - every interface, that should get an address via DHCP. This way, dhcpcd - is configured in an explicit way about which interface to run on. - - - - - GnuPG is now built without support for a graphical passphrase entry - by default. Please enable the gpg-agent user service - via the NixOS option programs.gnupg.agent.enable. - Note that upstream recommends using gpg-agent and - will spawn a gpg-agent on the first invocation of - GnuPG anyway. - - - - - The dynamicHosts option has been removed from the - NetworkManager - module. Allowing (multiple) regular users to override host entries - affecting the whole system opens up a huge attack vector. - There seem to be very rare cases where this might be useful. - Consider setting system-wide host entries using - networking.hosts, provide - them via the DNS server in your network, or use - environment.etc - to add a file into /etc/NetworkManager/dnsmasq.d - reconfiguring hostsdir. - - - - - The 99-main.network file was removed. Matching all - network interfaces caused many breakages, see - #18962 - and #71106. - - - We already don't support the global networking.useDHCP, - networking.defaultGateway and - networking.defaultGateway6 options - if networking.useNetworkd is enabled, - but direct users to configure the per-device - networking.interfaces.<name>.… options. - - - - - The stdenv now runs all bash with set -u, to catch the use of undefined variables. - Before, it itself used set -u but was careful to unset it so other packages' code ran as before. - Now, all bash code is held to the same high standard, and the rather complex stateful manipulation of the options can be discarded. - - - - - The SLIM Display Manager has been removed, as it has been unmaintained since 2013. - Consider migrating to a different display manager such as LightDM (current default in NixOS), - SDDM, GDM, or using the startx module which uses Xinitrc. - - - - - The Way Cooler wayland compositor has been removed, as the project has been officially canceled. - There are no more way-cooler attribute and programs.way-cooler options. - - - - - The BEAM package set has been deleted. You will only find there the different interpreters. - You should now use the different build tools coming with the languages with sandbox mode disabled. - - - - - There is now only one Xfce package-set and module. This means that attributes xfce4-14 - and xfceUnstable all now point to the latest Xfce 4.14 - packages. And in the future NixOS releases will be the latest released version of Xfce available at the - time of the release's development (if viable). - - - - - The phpfpm module now sets - PrivateTmp=true in its systemd units for better process isolation. - If you rely on /tmp being shared with other services, explicitly override this by - setting serviceConfig.PrivateTmp to false for each phpfpm unit. - - - - - KDE’s old multimedia framework Phonon no longer supports Qt 4. For that reason, Plasma desktop also does not have option any more. - - - - - The BeeGFS module has been removed. - - - - - The osquery module has been removed. - - - - - Going forward, ~/bin in the users home directory will no longer be in PATH by default. - If you depend on this you should set the option environment.homeBinInPath to true. - The aforementioned option was added this release. - - - - - The buildRustCrate infrastructure now produces lib outputs in addition to the out output. - This has led to drastically reduced closure sizes for some rust crates since development dependencies are now in the lib output. - - - - - Pango was upgraded to 1.44, which no longer uses freetype for font loading. This means that type1 - and bitmap fonts are no longer supported in applications relying on Pango for font rendering - (notably, GTK application). See - upstream issue for more information. - - - - - The roundcube module has been hardened. - - - - The password of the database is not written world readable in the store any more. If database.host is set to localhost, then a unix user of the same name as the database will be created and PostreSQL peer authentication will be used, removing the need for a password. Otherwise, a password is still needed and can be provided with the new option database.passwordFile, which should be set to the path of a file containing the password and readable by the user nginx only. The database.password option is insecure and deprecated. Usage of this option will print a warning. - - - - - A random des_key is set by default in the configuration of roundcube, instead of using the hardcoded and insecure default. To ensure a clean migration, all users will be logged out when you upgrade to this release. - - - - - - - - The packages openobex and obexftp - are no longer installed when enabling Bluetooth via - . - - - - - The dump1090 derivation has been changed to use FlightAware's dump1090 - as its upstream. However, this version does not have an internal webserver anymore. The - assets in the share/dump1090 directory of the derivation can be used - in conjunction with an external webserver to replace this functionality. - - - - - The fourStore and fourStoreEndpoint modules have been removed. - - - - - Polkit no longer has the user of uid 0 (root) as an admin identity. - We now follow the upstream default of only having every member of the wheel - group admin privileged. Before it was root and members of wheel. - The positive outcome of this is pkexec GUI popups or terminal prompts - will no longer require the user to choose between two essentially equivalent - choices (whether to perform the action as themselves with wheel permissions, or as the root user). - - - - - NixOS containers no longer build NixOS manual by default. This saves evaluation time, - especially if there are many declarative containers defined. Note that this is already done - when <nixos/modules/profiles/minimal.nix> module is included - in container config. - - - - - The kresd services deprecates the interfaces option - in favor of the listenPlain option which requires full - systemd.socket compatible - declaration which always include a port. - - - - - Virtual console options have been reorganized and can be found under - a single top-level attribute: console. - The full set of changes is as follows: - - - - - i18n.consoleFont renamed to - console.font - - - - - i18n.consoleKeyMap renamed to - console.keyMap - - - - - i18n.consoleColors renamed to - console.colors - - - - - i18n.consolePackages renamed to - console.packages - - - - - i18n.consoleUseXkbConfig renamed to - console.useXkbConfig - - - - - boot.earlyVconsoleSetup renamed to - console.earlySetup - - - - - boot.extraTTYs renamed to - console.extraTTYs. - - - - - - - The awstats module has been rewritten - to serve stats via static html pages, updated on a timer, over nginx, - instead of dynamic cgi pages over apache. - - - Minor changes will be required to migrate existing configurations. Details of the - required changes can seen by looking through the awstats - module. - - - - - The httpd module no longer provides options to support serving web content without defining a virtual host. As a - result of this the services.httpd.logPerVirtualHost - option now defaults to true instead of false. Please update your - configuration to make use of services.httpd.virtualHosts. - - - The services.httpd.virtualHosts.<name> - option has changed type from a list of submodules to an attribute set of submodules, better matching - services.nginx.virtualHosts.<name>. - - - This change comes with the addition of the following options which mimic the functionality of their nginx counterparts: - services.httpd.virtualHosts.<name>.addSSL, - services.httpd.virtualHosts.<name>.forceSSL, - services.httpd.virtualHosts.<name>.onlySSL, - services.httpd.virtualHosts.<name>.enableACME, - services.httpd.virtualHosts.<name>.acmeRoot, and - services.httpd.virtualHosts.<name>.useACMEHost. - - - - - For NixOS configuration options, the loaOf type has - been deprecated and will be removed in a future release. In nixpkgs, - options of this type will be changed to attrsOf - instead. If you were using one of these in your configuration, you will - see a warning suggesting what changes will be required. - - - For example, users.users is a - loaOf option that is commonly used as follows: - -users.users = - [ { name = "me"; - description = "My personal user."; - isNormalUser = true; - } - ]; - - This should be rewritten by removing the list and using the - value of name as the name of the attribute set: - -users.users.me = - { description = "My personal user."; - isNormalUser = true; - }; - - - - For more information on this change have look at these links: - issue #1800, - PR #63103. - - - - - For NixOS modules, the types types.submodule and types.submoduleWith now support - paths as allowed values, similar to how imports supports paths. - Because of this, if you have a module that defines an option of type - either (submodule ...) path, it will break since a path - is now treated as the first type instead of the second. To fix this, change - the type to either path (submodule ...). - - - - - The Buildkite - Agent module and corresponding packages have been updated to - 3.x, and to support multiple instances of the agent running at the - same time. This means you will have to rename - services.buildkite-agent to - services.buildkite-agents.<name>. Furthermore, - the following options have been changed: - - - - - services.buildkite-agent.meta-data has been renamed to - services.buildkite-agents.<name>.tags, - to match upstreams naming for 3.x. - Its type has also changed - it now accepts an attrset of strings. - - - - - Theservices.buildkite-agent.openssh.publicKeyPath option - has been removed, as it's not necessary to deploy public keys to clone private - repositories. - - - - - services.buildkite-agent.openssh.privateKeyPath - has been renamed to - buildkite-agents.<name>.privateSshKeyPath, - as the whole openssh now only contained that single option. - - - - - services.buildkite-agents.<name>.shell - has been introduced, allowing to specify a custom shell to be used. - - - - - - - The citrix_workspace_19_3_0 package has been removed as - it will be EOLed within the lifespan of 20.03. For further information, - please refer to the support and maintenance information from upstream. - - - - - The gcc5 and gfortran5 packages have been removed. - - - - - The module has been removed. - It was only intended for use in internal NixOS tests, and gave the false impression - of it being a special display manager when it's actually LightDM. - Please use the options instead, - or any other display manager in NixOS as they all support auto-login. If you used this module specifically - because it permitted root auto-login you can override the lightdm-autologin pam module like: - -security.pam.services.lightdm-autologin.text = lib.mkForce '' - auth requisite pam_nologin.so - auth required pam_succeed_if.so quiet - auth required pam_permit.so - - account include lightdm - - password include lightdm - - session include lightdm -''; - - The difference is the: - -auth required pam_succeed_if.so quiet - - line, where default it's: - -auth required pam_succeed_if.so uid >= 1000 quiet - - not permitting users with uid's below 1000 (like root). - All other display managers in NixOS are configured like this. - - - - - There have been lots of improvements to the Mailman module. As - a result, - - - - - The - option has been renamed to . - - - - - The - option has been removed. This is because having an option - for the Hyperkitty API key meant that the API key would be - stored in the world-readable Nix store, which was a - security vulnerability. A new Hyperkitty API key will be - generated the first time the new Hyperkitty service is run, - and it will then be persisted outside of the Nix store. To - continue using Hyperkitty, you must set to - true. - - - - - Additionally, some Postfix configuration must now be set - manually instead of automatically by the Mailman module: - - = [ "hash:/var/lib/mailman/data/postfix_domains" ]; -.transport_maps = [ "hash:/var/lib/mailman/data/postfix_lmtp" ]; -.local_recipient_maps = [ "hash:/var/lib/mailman/data/postfix_lmtp" ]; - - This is because some users may want to include other values - in these lists as well, and this was not possible if they - were set automatically by the Mailman module. It would not - have been possible to just concatenate values from multiple - modules each setting the values they needed, because the - order of elements in the list is significant. - - - - - - The LLVM versions 3.5, 3.9 and 4 (including the corresponding CLang versions) have been dropped. - - - - The option has - been replaced by . - The new option allows better control of the IPv6 temporary addresses, - including completely disabling them for interfaces where they are not - needed. - - - - - Rspamd was updated to version 2.2. Read - - the upstream migration notes carefully. Please be especially - aware that some modules were removed and the default Bayes backend is - now Redis. - - - - - The *psu versions of oraclejdk8 have been removed - as they aren't provided by upstream anymore. - - - - - The module has been removed - as it used the deprecated version of dnscrypt-proxy. We've added - to use the supported version. - This module supports configuration via the Nix attribute set - , or by passing a TOML configuration file via - . - -# Example configuration: -services.dnscrypt-proxy2.enable = true; -services.dnscrypt-proxy2.settings = { - listen_addresses = [ "127.0.0.1:43" ]; - sources.public-resolvers = { - urls = [ "https://download.dnscrypt.info/resolvers-list/v2/public-resolvers.md" ]; - cache_file = "public-resolvers.md"; - minisign_key = "RWQf6LRCGA9i53mlYecO4IzT51TGPpvWucNSCh1CBM0QTaLn73Y7GFO3"; - refresh_delay = 72; - }; -}; - -services.dnsmasq.enable = true; -services.dnsmasq.servers = [ "127.0.0.1#43" ]; - - - - - - qesteidutil has been deprecated in favor of qdigidoc. - - - - - sqldeveloper_18 has been removed as it's not maintained anymore, - sqldeveloper has been updated to version 19.4. - Please note that this means that this means that the oraclejdk is now - required. For further information please read the - release notes. - - - - - Haskell env and shellFor dev shell environments now organize dependencies the same way as regular builds. - In particular, rather than receiving all the different lists of dependencies mashed together as one big list, and then partitioning into Haskell and non-Hakell dependencies, they work from the original many different dependency parameters and don't need to algorithmically partition anything. - - - This means that if you incorrectly categorize a dependency, e.g. non-Haskell library dependency as a buildDepends or run-time Haskell dependency as a setupDepends, whereas things would have worked before they may not work now. - - - - - The gcc-snapshot-package has been removed. It's marked as broken for >2 years and used to point - to a fairly old snapshot from the gcc7-branch. - - - - - The nixos-build-vms8 - -script now uses the python test-driver. - - - - - The riot-web package now accepts configuration overrides as an attribute set instead of a string. - A formerly used JSON configuration can be converted to an attribute set with builtins.fromJSON. - - - The new default configuration also disables automatic guest account registration and analytics to improve privacy. - The previous behavior can be restored by setting config.riot-web.conf = { disable_guests = false; piwik = true; }. - - - - - Stand-alone usage of Upower now requires - instead of just installing into - . - - - - - nextcloud has been updated to v18.0.2. This means - that users from NixOS 19.09 can't upgrade directly since you can only move one version - forward and 19.09 uses v16.0.8. - - - To provide a safe upgrade-path and to circumvent similar issues in the future, the following - measures were taken: - - - - The pkgs.nextcloud-attribute has been removed and replaced with - versioned attributes (currently pkgs.nextcloud17 and - pkgs.nextcloud18). With this change major-releases can be backported - without breaking stuff and to make upgrade-paths easier. - - - - - Existing setups will be detected using - system.stateVersion: by default, - nextcloud17 will be used, but will raise a warning which notes - that after that deploy it's recommended to update to the latest stable version - (nextcloud18) by declaring the newly introduced setting - services.nextcloud.package. - - - - - Users with an overlay (e.g. to use nextcloud at version - v18 on 19.09) will get an evaluation error - by default. This is done to ensure that our - package-option doesn't select an - older version by accident. It's recommended to use pkgs.nextcloud18 - or to set package to - pkgs.nextcloud explicitly. - - - - - - - Please note that if you're coming from 19.03 or older, you have - to manually upgrade to 19.09 first to upgrade your server - to Nextcloud v16. - - - - - - Hydra has gained a massive performance improvement due to - some database schema - changes by adding several IDs and better indexing. However, it's necessary - to upgrade Hydra in multiple steps: - - - - At first, an older version of Hydra needs to be deployed which adds those - (nullable) columns. When having set stateVersion - to a value older than 20.03, this package will be selected - by default from the module when upgrading. Otherwise, the package can be deployed using - the following config: -{ pkgs, ... }: { - services.hydra.package = pkgs.hydra-migration; -} - - - - - Automatically fill the newly added ID columns on the server by running the following - command: - -$ hydra-backfill-ids - - - Please note that this process can take a while depending on your database-size! - - - - - - Deploy a newer version of Hydra to activate the DB optimizations. This can be done by - using hydra-unstable. This package already includes - flake-support and is - therefore compiled against pkgs.nixFlakes. - - - If your stateVersion is set to - 20.03 or greater, hydra-unstable will be used - automatically! This will break your setup if you didn't run the migration. - - - Please note that Hydra is currently not available with nixStable - as this doesn't compile anymore. - - - - - - pkgs.hydra has been removed to ensure a graceful database-migration - using the dedicated package-attributes. If you still have pkgs.hydra - defined in e.g. an overlay, an assertion error will be thrown. To circumvent this, - you need to set to pkgs.hydra - explicitly and make sure you know what you're doing! - - - - - - - The TokuDB storage engine will be disabled in mariadb 10.5. It is recommended to switch - to RocksDB. See also TokuDB. - - - -
- -
- Other Notable Changes - - - - SD images are now compressed by default using bzip2. - - - - The nginx web server previously started its master process as root - privileged, then ran worker processes as a less privileged identity user - (the nginx user). - This was changed to start all of nginx as a less privileged user (defined by - services.nginx.user and - services.nginx.group). As a consequence, all files that - are needed for nginx to run (included configuration fragments, SSL - certificates and keys, etc.) must now be readable by this less privileged - user/group. - - - To continue to use the old approach, you can configure: - -services.nginx.appendConfig = let cfg = config.services.nginx; in ''user ${cfg.user} ${cfg.group};''; -systemd.services.nginx.serviceConfig.User = lib.mkForce "root"; - - - - - - OpenSSH has been upgraded from 7.9 to 8.1, improving security and adding features - but with potential incompatibilities. Consult the - - release announcement for more information. - - - - - PRETTY_NAME in /etc/os-release - now uses the short rather than full version string. - - - - - The ACME module has switched from simp-le to lego - which allows us to support DNS-01 challenges and wildcard certificates. The following options have been added: - security.acme.acceptTerms, - security.acme.certs.<name>.dnsProvider, - security.acme.certs.<name>.credentialsFile, - security.acme.certs.<name>.dnsPropagationCheck. - As well as this, the options security.acme.acceptTerms and either - security.acme.email or security.acme.certs.<name>.email - must be set in order to use the ACME module. - Certificates will be regenerated on activation, no account or certificate will be migrated from simp-le. - In particular private keys will not be preserved. However, the credentials for simp-le are preserved and - thus it is possible to roll back to previous versions without breaking certificate generation. - Note also that in contrary to simp-le a new private key is recreated at each renewal by default, which can - have consequences if you embed your public key in apps. - - - - - It is now possible to unlock LUKS-Encrypted file systems using a FIDO2 token - via . - - - - - Predictably named network interfaces get renamed in stage-1. This means that it is possible - to use the proper interface name for e.g. Dropbear setups. - - - For further reference, please read #68953 or the corresponding discourse thread. - - - - - The matrix-synapse-package has been updated to - v1.11.1. - Due to stricter requirements - for database configuration when using postgresql, the automated database setup - of the module has been removed to avoid any further edge-cases. - - - matrix-synapse expects postgresql-databases to have the options - LC_COLLATE and LC_CTYPE set to - 'C' which basically - instructs postgresql to ignore any locale-based preferences. - - - Depending on your setup, you need to incorporate one of the following changes in your setup to - upgrade to 20.03: - - If you use sqlite3 you don't need to do anything. - If you use postgresql on a different server, you don't need - to change anything as well since this module was never designed to configure remote databases. - - If you use postgresql and configured your synapse initially on - 19.09 or older, you simply need to enable postgresql-support - explicitly: -{ ... }: { - services.matrix-synapse = { - enable = true; - /* and all the other config you've defined here */ - }; - services.postgresql.enable = true; -} - - If you deploy a fresh matrix-synapse, you need to configure - the database yourself (e.g. by using the - services.postgresql.initialScript - option). An example for this can be found in the - documentation of the Matrix module. - - If you initially deployed your matrix-synapse on - nixos-unstable after the 19.09-release, - your database is misconfigured due to a regression in NixOS. For now, matrix-synapse will - startup with a warning, but it's recommended to reconfigure the database to set the values - LC_COLLATE and LC_CTYPE to - 'C'. - - - - - - - The systemd.network.links option is now respected - even when systemd-networkd is disabled. - This mirrors the behaviour of systemd - It's udev that parses .link files, - not systemd-networkd. - - - - - mongodb has been updated to version 3.4.24. - - - Please note that mongodb has been relicensed under their own - - sspl-license. Since it's not entirely free and not OSI-approved, - it's listed as non-free. This means that Hydra doesn't provide prebuilt - mongodb-packages and needs to be built locally. - - - - - -
-
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2009.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2009.section.md new file mode 100644 index 0000000000..48059ab07f --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2009.section.md @@ -0,0 +1,745 @@ +# Release 20.09 ("Nightingale", 2020.10/27) {#sec-release-20.09} + +Support is planned until the end of June 2021, handing over to 21.05. (Plans [ have shifted](https://github.com/NixOS/rfcs/blob/master/rfcs/0080-nixos-release-schedule.md#core-changes) by two months since release of 20.09.) + +## Highlights {#sec-release-20.09-highlights} + +In addition to 7349 new, 14442 updated, and 8181 removed packages, this release has the following highlights: + +- Core version changes: + + - gcc: 9.2.0 -\> 9.3.0 + + - glibc: 2.30 -\> 2.31 + + - linux: still defaults to 5.4.x, all supported kernels available + + - mesa: 19.3.5 -\> 20.1.7 + +- Desktop Environments: + + - plasma5: 5.17.5 -\> 5.18.5 + + - kdeApplications: 19.12.3 -\> 20.08.1 + + - gnome3: 3.34 -\> 3.36, see its [release notes](https://help.gnome.org/misc/release-notes/3.36/) + + - cinnamon: added at 4.6 + + - NixOS now distributes an official [GNOME ISO](https://nixos.org/download.html#nixos-iso) + +- Programming Languages and Frameworks: + + - Agda ecosystem was heavily reworked (see more details below) + + - PHP now defaults to PHP 7.4, updated from 7.3 + + - PHP 7.2 is no longer supported due to upstream not supporting this version for the entire lifecycle of the 20.09 release + + - Python 3 now defaults to Python 3.8 instead of 3.7 + + - Python 3.5 reached its upstream EOL at the end of September 2020: it has been removed from the list of available packages + +- Databases and Service Monitoring: + + - MariaDB has been updated to 10.4, MariaDB Galera to 26.4. Please read the related upgrade instructions under [backwards incompatibilities](#sec-release-20.09-incompatibilities) before upgrading. + + - Zabbix now defaults to 5.0, updated from 4.4. Please read related sections under [backwards compatibilities](#sec-release-20.09-incompatibilities) before upgrading. + +- Major module changes: + + - Quickly configure a complete, private, self-hosted video conferencing solution with the new Jitsi Meet module. + + - Two new options, [authorizedKeysCommand](options.html#opt-services.openssh.authorizedKeysCommand) and [authorizedKeysCommandUser](options.html#opt-services.openssh.authorizedKeysCommandUser), have been added to the `openssh` module. If you have `AuthorizedKeysCommand` in your [services.openssh.extraConfig](options.html#opt-services.openssh.extraConfig) you should make use of these new options instead. + + - There is a new module for Podman (`virtualisation.podman`), a drop-in replacement for the Docker command line. + + - The new `virtualisation.containers` module manages configuration shared by the CRI-O and Podman modules. + + - Declarative Docker containers are renamed from `docker-containers` to `virtualisation.oci-containers.containers`. This is to make it possible to use `podman` instead of `docker`. + + - The new option [documentation.man.generateCaches](options.html#opt-documentation.man.generateCaches) has been added to automatically generate the `man-db` caches, which are needed by utilities like `whatis` and `apropos`. The caches are generated during the build of the NixOS configuration: since this can be expensive when a large number of packages are installed, the feature is disabled by default. + + - `services.postfix.sslCACert` was replaced by `services.postfix.tlsTrustedAuthorities` which now defaults to system certificate authorities. + + - The various documented workarounds to use steam have been converted to a module. `programs.steam.enable` enables steam, controller support and the workarounds. + + - Support for built-in LCDs in various pieces of Logitech hardware (keyboards and USB speakers). `hardware.logitech.lcd.enable` enables support for all hardware supported by the [g15daemon project](https://sourceforge.net/projects/g15daemon/). + + - The GRUB module gained support for basic password protection, which allows to restrict non-default entries in the boot menu to one or more users. The users and passwords are defined via the option `boot.loader.grub.users`. Note: Password support is only available in GRUB version 2. + +- NixOS module changes: + + - The NixOS module system now supports freeform modules as a mix between `types.attrsOf` and `types.submodule`. These allow you to explicitly declare a subset of options while still permitting definitions without an associated option. See [](#sec-freeform-modules) for how to use them. + + - Following its deprecation in 20.03, the Perl NixOS test driver has been removed. All remaining tests have been ported to the Python test framework. Code outside nixpkgs using `make-test.nix` or `testing.nix` needs to be ported to `make-test-python.nix` and `testing-python.nix` respectively. + + - Subordinate GID and UID mappings are now set up automatically for all normal users. This will make container tools like Podman work as non-root users out of the box. + +- Starting with this release, the hydra-build-result `nixos-YY.MM` branches no longer exist in the [deprecated nixpkgs-channels repository](https://github.com/nixos/nixpkgs-channels). These branches are now in [the main nixpkgs repository](https://github.com/nixos/nixpkgs). + +## New Services {#sec-release-20.09-new-services} + +In addition to 1119 new, 118 updated, and 476 removed options; 61 new modules were added since the last release: + +- Hardware: + + - [hardware.system76.firmware-daemon.enable](options.html#opt-hardware.system76.firmware-daemon.enable) adds easy support of system76 firmware + + - [hardware.uinput.enable](options.html#opt-hardware.uinput.enable) loads uinput kernel module + + - [hardware.video.hidpi.enable](options.html#opt-hardware.video.hidpi.enable) enable good defaults for HiDPI displays + + - [hardware.wooting.enable](options.html#opt-hardware.wooting.enable) support for Wooting keyboards + + - [hardware.xpadneo.enable](options.html#opt-hardware.xpadneo.enable) xpadneo driver for Xbox One wireless controllers + +- Programs: + + - [programs.hamster.enable](options.html#opt-programs.hamster.enable) enable hamster time tracking + + - [programs.steam.enable](options.html#opt-programs.steam.enable) adds easy enablement of steam and related system configuration + +- Security: + + - [security.doas.enable](options.html#opt-security.doas.enable) alternative to sudo, allows non-root users to execute commands as root + + - [security.tpm2.enable](options.html#opt-security.tpm2.enable) add Trusted Platform Module 2 support + +- System: + + - [boot.initrd.network.openvpn.enable](options.html#opt-boot.initrd.network.openvpn.enable) start an OpenVPN client during initrd boot + +- Virtualization: + + - [boot.enableContainers](options.html#opt-boot.enableContainers) use nixos-containers + + - [virtualisation.oci-containers.containers](options.html#opt-virtualisation.oci-containers.containers) run OCI (Docker) containers + + - [virtualisation.podman.enable](options.html#opt-virtualisation.podman.enable) daemonless container engine + +- Services: + + - [services.ankisyncd.enable](options.html#opt-services.ankisyncd.enable) Anki sync server + + - [services.bazarr.enable](options.html#opt-services.bazarr.enable) Subtitle manager for Sonarr and Radarr + + - [services.biboumi.enable](options.html#opt-services.biboumi.enable) Biboumi XMPP gateway to IRC + + - [services.blockbook-frontend](options.html#opt-services.blockbook-frontend) Blockbook-frontend, a service for the Trezor wallet + + - [services.cage.enable](options.html#opt-services.cage.enable) Wayland cage service + + - [services.convos.enable](options.html#opt-services.convos.enable) IRC daemon, which can be accessed throught the browser + + - [services.engelsystem.enable](options.html#opt-services.engelsystem.enable) Tool for coordinating volunteers and shifts on large events + + - [services.espanso.enable](options.html#opt-services.espanso.enable) text-expander written in rust + + - [services.foldingathome.enable](options.html#opt-services.foldingathome.enable) Folding\@home client + + - [services.gerrit.enable](options.html#opt-services.gerrit.enable) Web-based team code collaboration tool + + - [services.go-neb.enable](options.html#opt-services.go-neb.enable) Matrix bot + + - [services.hardware.xow.enable](options.html#opt-services.hardware.xow.enable) xow as a systemd service + + - [services.hercules-ci-agent.enable](options.html#opt-services.hercules-ci-agent.enable) Hercules CI build agent + + - [services.jicofo.enable](options.html#opt-services.jicofo.enable) Jitsi Conference Focus, component of Jitsi Meet + + - [services.jirafeau.enable](options.html#opt-services.jirafeau.enable) A web file repository + + - [services.jitsi-meet.enable](options.html#opt-services.jitsi-meet.enable) Secure, simple and scalable video conferences + + - [services.jitsi-videobridge.enable](options.html#opt-services.jitsi-videobridge.enable) Jitsi Videobridge, a WebRTC compatible router + + - [services.jupyterhub.enable](options.html#opt-services.jupyterhub.enable) Jupyterhub development server + + - [services.k3s.enable](options.html#opt-services.k3s.enable) Lightweight Kubernetes distribution + + - [services.magic-wormhole-mailbox-server.enable](options.html#opt-services.magic-wormhole-mailbox-server.enable) Magic Wormhole Mailbox Server + + - [services.malcontent.enable](options.html#opt-services.malcontent.enable) Parental Control support + + - [services.matrix-appservice-discord.enable](options.html#opt-services.matrix-appservice-discord.enable) Matrix and Discord bridge + + - [services.mautrix-telegram.enable](options.html#opt-services.mautrix-telegram.enable) Matrix-Telegram puppeting/relaybot bridge + + - [services.mirakurun.enable](options.html#opt-services.mirakurun.enable) Japanese DTV Tuner Server Service + + - [services.molly-brown.enable](options.html#opt-services.molly-brown.enable) Molly-Brown Gemini server + + - [services.mullvad-vpn.enable](options.html#opt-services.mullvad-vpn.enable) Mullvad VPN daemon + + - [services.ncdns.enable](options.html#opt-services.ncdns.enable) Namecoin to DNS bridge + + - [services.nextdns.enable](options.html#opt-services.nextdns.enable) NextDNS to DoH Proxy service + + - [services.nix-store-gcs-proxy](options.html#opt-services.nix-store-gcs-proxy) Google storage bucket to be used as a nix store + + - [services.onedrive.enable](options.html#opt-services.onedrive.enable) OneDrive sync service + + - [services.pinnwand.enable](options.html#opt-services.pinnwand.enable) Pastebin-like service + + - [services.pixiecore.enable](options.html#opt-services.pixiecore.enable) Manage network booting of machines + + - [services.privacyidea.enable](options.html#opt-services.privacyidea.enable) Privacy authentication server + + - [services.quorum.enable](options.html#opt-services.quorum.enable) Quorum blockchain daemon + + - [services.robustirc-bridge.enable](options.html#opt-services.robustirc-bridge.enable) RobustIRC bridge + + - [services.rss-bridge.enable](options.html#opt-services.rss-bridge.enable) Generate RSS and Atom feeds + + - [services.rtorrent.enable](options.html#opt-services.rtorrent.enable) rTorrent service + + - [services.smartdns.enable](options.html#opt-services.smartdns.enable) SmartDNS DNS server + + - [services.sogo.enable](options.html#opt-services.sogo.enable) SOGo groupware + + - [services.teeworlds.enable](options.html#opt-services.teeworlds.enable) Teeworlds game server + + - [services.torque.mom.enable](options.html#opt-services.torque.mom.enable) torque computing node + + - [services.torque.server.enable](options.html#opt-services.torque.server.enable) torque server + + - [services.tuptime.enable](options.html#opt-services.tuptime.enable) A total uptime service + + - [services.urserver.enable](options.html#opt-services.urserver.enable) X11 remote server + + - [services.wasabibackend.enable](options.html#opt-services.wasabibackend.enable) Wasabi backend service + + - [services.yubikey-agent.enable](options.html#opt-services.yubikey-agent.enable) Yubikey agent + + - [services.zigbee2mqtt.enable](options.html#opt-services.zigbee2mqtt.enable) Zigbee to MQTT bridge + +## Backward Incompatibilities {#sec-release-20.09-incompatibilities} + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- MariaDB has been updated to 10.4, MariaDB Galera to 26.4. Before you upgrade, it would be best to take a backup of your database. For MariaDB Galera Cluster, see [Upgrading from MariaDB 10.3 to MariaDB 10.4 with Galera Cluster](https://mariadb.com/kb/en/upgrading-from-mariadb-103-to-mariadb-104-with-galera-cluster/) instead. Before doing the upgrade read [Incompatible Changes Between 10.3 and 10.4](https://mariadb.com/kb/en/upgrading-from-mariadb-103-to-mariadb-104/#incompatible-changes-between-103-and-104). After the upgrade you will need to run `mysql_upgrade`. MariaDB 10.4 introduces a number of changes to the authentication process, intended to make things easier and more intuitive. See [Authentication from MariaDB 10.4](https://mariadb.com/kb/en/authentication-from-mariadb-104/). unix_socket auth plugin does not use a password, and uses the connecting user\'s UID instead. When a new MariaDB data directory is initialized, two MariaDB users are created and can be used with new unix_socket auth plugin, as well as traditional mysql_native_password plugin: root\@localhost and mysql\@localhost. To actually use the traditional mysql_native_password plugin method, one must run the following: + + ```nix + { + services.mysql.initialScript = pkgs.writeText "mariadb-init.sql" '' + ALTER USER root@localhost IDENTIFIED VIA mysql_native_password USING PASSWORD("verysecret"); + ''; + } + ``` + + When MariaDB data directory is just upgraded (not initialized), the users are not created or modified. + +- MySQL server is now started with additional systemd sandbox/hardening options for better security. The PrivateTmp, ProtectHome, and ProtectSystem options may be problematic when MySQL is attempting to read from or write to your filesystem anywhere outside of its own state directory, for example when calling `LOAD DATA INFILE or SELECT * INTO OUTFILE`. In this scenario a variant of the following may be required: - allow MySQL to read from /home and /tmp directories when using `LOAD DATA INFILE` + + ```nix + { + systemd.services.mysql.serviceConfig.ProtectHome = lib.mkForce "read-only"; + } + ``` + + \- allow MySQL to write to custom folder `/var/data` when using `SELECT * INTO OUTFILE`, assuming the mysql user has write access to `/var/data` + + ```nix + { + systemd.services.mysql.serviceConfig.ReadWritePaths = [ "/var/data" ]; + } + ``` + + The MySQL service no longer runs its `systemd` service startup script as `root` anymore. A dedicated non `root` super user account is required for operation. This means users with an existing MySQL or MariaDB database server are required to run the following SQL statements as a super admin user before upgrading: + + ```SQL + CREATE USER IF NOT EXISTS 'mysql'@'localhost' identified with unix_socket; + GRANT ALL PRIVILEGES ON *.* TO 'mysql'@'localhost' WITH GRANT OPTION; + ``` + + If you use MySQL instead of MariaDB please replace `unix_socket` with `auth_socket`. If you have changed the value of [services.mysql.user](options.html#opt-services.mysql.user) from the default of `mysql` to a different user please change `'mysql'@'localhost'` to the corresponding user instead. + +- Zabbix now defaults to 5.0, updated from 4.4. Please carefully read through [the upgrade guide](https://www.zabbix.com/documentation/current/manual/installation/upgrade/sources) and apply any changes required. Be sure to take special note of the section on [enabling extended range of numeric (float) values](https://www.zabbix.com/documentation/current/manual/installation/upgrade_notes_500#enabling_extended_range_of_numeric_float_values) as you will need to apply this database migration manually. + + If you are using Zabbix Server with a MySQL or MariaDB database you should note that using a character set of `utf8` and a collate of `utf8_bin` has become mandatory with this release. See the upstream [issue](https://support.zabbix.com/browse/ZBX-17357) for further discussion. Before upgrading you should check the character set and collation used by your database and ensure they are correct: + + ```SQL + SELECT + default_character_set_name, + default_collation_name + FROM + information_schema.schemata + WHERE + schema_name = 'zabbix'; + ``` + + If these values are not correct you should take a backup of your database and convert the character set and collation as required. Here is an [example](https://www.zabbix.com/forum/zabbix-help/396573-reinstall-after-upgrade?p=396891#post396891) of how to do so, taken from the Zabbix forums: + + ```SQL + ALTER DATABASE `zabbix` DEFAULT CHARACTER SET utf8 COLLATE utf8_bin; + + -- the following will produce a list of SQL commands you should subsequently execute + SELECT CONCAT("ALTER TABLE ", TABLE_NAME," CONVERT TO CHARACTER SET utf8 COLLATE utf8_bin;") AS ExecuteTheString + FROM information_schema.`COLUMNS` + WHERE table_schema = "zabbix" AND COLLATION_NAME = "utf8_general_ci"; + ``` + +- maxx package removed along with `services.xserver.desktopManager.maxx` module. Please migrate to cdesktopenv and `services.xserver.desktopManager.cde` module. + +- The [matrix-synapse](options.html#opt-services.matrix-synapse.enable) module no longer includes optional dependencies by default, they have to be added through the [plugins](options.html#opt-services.matrix-synapse.plugins) option. + +- `buildGoModule` now internally creates a vendor directory in the source tree for downloaded modules instead of using go\'s [module proxy protocol](https://golang.org/cmd/go/#hdr-Module_proxy_protocol). This storage format is simpler and therefore less likely to break with future versions of go. As a result `buildGoModule` switched from `modSha256` to the `vendorSha256` attribute to pin fetched version data. + +- Grafana is now built without support for phantomjs by default. Phantomjs support has been [deprecated in Grafana](https://grafana.com/docs/grafana/latest/guides/whats-new-in-v6-4/) and the phantomjs project is [currently unmaintained](https://github.com/ariya/phantomjs/issues/15344#issue-302015362). It can still be enabled by providing `phantomJsSupport = true` to the package instantiation: + + ```nix + { + services.grafana.package = pkgs.grafana.overrideAttrs (oldAttrs: rec { + phantomJsSupport = true; + }); + } + ``` + +- The [supybot](options.html#opt-services.supybot.enable) module now uses `/var/lib/supybot` as its default [stateDir](options.html#opt-services.supybot.stateDir) path if `stateVersion` is 20.09 or higher. It also enables a number of [systemd sandboxing options](https://www.freedesktop.org/software/systemd/man/systemd.exec.html#Sandboxing) which may possibly interfere with some plugins. If this is the case you can disable the options through attributes in `systemd.services.supybot.serviceConfig`. + +- The `security.duosec.skey` option, which stored a secret in the nix store, has been replaced by a new [security.duosec.secretKeyFile](options.html#opt-security.duosec.secretKeyFile) option for better security. + + `security.duosec.ikey` has been renamed to [security.duosec.integrationKey](options.html#opt-security.duosec.integrationKey). + +- `vmware` has been removed from the `services.x11.videoDrivers` defaults. For VMWare guests set `virtualisation.vmware.guest.enable` to `true` which will include the appropriate drivers. + +- The initrd SSH support now uses OpenSSH rather than Dropbear to allow the use of Ed25519 keys and other OpenSSH-specific functionality. Host keys must now be in the OpenSSH format, and at least one pre-generated key must be specified. + + If you used the `boot.initrd.network.ssh.host*Key` options, you\'ll get an error explaining how to convert your host keys and migrate to the new `boot.initrd.network.ssh.hostKeys` option. Otherwise, if you don\'t have any host keys set, you\'ll need to generate some; see the `hostKeys` option documentation for instructions. + +- Since this release there\'s an easy way to customize your PHP install to get a much smaller base PHP with only wanted extensions enabled. See the following snippet installing a smaller PHP with the extensions `imagick`, `opcache`, `pdo` and `pdo_mysql` loaded: + + ```nix + { + environment.systemPackages = [ + (pkgs.php.withExtensions + ({ all, ... }: with all; [ + imagick + opcache + pdo + pdo_mysql + ]) + ) + ]; + } + ``` + + The default `php` attribute hasn\'t lost any extensions. The `opcache` extension has been added. All upstream PHP extensions are available under php.extensions.\. + + All PHP `config` flags have been removed for the following reasons: + +- The updated `php` attribute is now easily customizable to your liking by using `php.withExtensions` or `php.buildEnv` instead of writing config files or changing configure flags. + +- The remaining configuration flags can now be set directly on the `php` attribute. For example, instead of + + ```nix + { + php.override { + config.php.embed = true; + config.php.apxs2 = false; + } + } + ``` + + you should now write + + ```nix + { + php.override { + embedSupport = true; + apxs2Support = false; + } + } + ``` + +- The ACME module has been overhauled for simplicity and maintainability. Cert generation now implicitly uses the `acme` user, and the `security.acme.certs._name_.user` option has been removed. Instead, certificate access from other services is now managed through group permissions. The module no longer runs lego twice under certain conditions, and will correctly renew certificates if their configuration is changed. Services which reload nginx and httpd after certificate renewal are now properly configured too so you no longer have to do this manually if you are using HTTPS enabled virtual hosts. A mechanism for regenerating certs on demand has also been added and documented. + +- Gollum received a major update to version 5.x and you may have to change some links in your wiki when migrating from gollum 4.x. More information can be found [here](https://github.com/gollum/gollum/wiki/5.0-release-notes#migrating-your-wiki). + +- Deluge 2.x was added and is used as default for new NixOS installations where stateVersion is \>= 20.09. If you are upgrading from a previous NixOS version, you can set `service.deluge.package = pkgs.deluge-2_x` to upgrade to Deluge 2.x and migrate the state to the new format. Be aware that backwards state migrations are not supported by Deluge. + +- Nginx web server now starting with additional sandbox/hardening options. By default, write access to `/var/log/nginx` and `/var/cache/nginx` is allowed. To allow writing to other folders, use `systemd.services.nginx.serviceConfig.ReadWritePaths` + + ```nix + { + systemd.services.nginx.serviceConfig.ReadWritePaths = [ "/var/www" ]; + } + ``` + + Nginx is also started with the systemd option `ProtectHome = mkDefault true;` which forbids it to read anything from `/home`, `/root` and `/run/user` (see [ProtectHome docs](https://www.freedesktop.org/software/systemd/man/systemd.exec.html#ProtectHome=) for details). If you require serving files from home directories, you may choose to set e.g. + + ```nix + { + systemd.services.nginx.serviceConfig.ProtectHome = "read-only"; + } + ``` + +- The NixOS options `nesting.clone` and `nesting.children` have been deleted, and replaced with named [specialisation](options.html#opt-specialisation) configurations. + + Replace a `nesting.clone` entry with: + + ```nix + { + specialisation.example-sub-configuration = { + configuration = { + ... + }; + }; + ``` + + Replace a `nesting.children` entry with: + + ```nix + { + specialisation.example-sub-configuration = { + inheritParentConfig = false; + configuration = { + ... + }; + }; + ``` + + To switch to a specialised configuration at runtime you need to run: + + ```ShellSession + $ sudo /run/current-system/specialisation/example-sub-configuration/bin/switch-to-configuration test + ``` + + Before you would have used: + + ```ShellSession + $ sudo /run/current-system/fine-tune/child-1/bin/switch-to-configuration test + ``` + +- The Nginx log directory has been moved to `/var/log/nginx`, the cache directory to `/var/cache/nginx`. The option `services.nginx.stateDir` has been removed. + +- The httpd web server previously started its main process as root privileged, then ran worker processes as a less privileged identity user. This was changed to start all of httpd as a less privileged user (defined by [services.httpd.user](options.html#opt-services.httpd.user) and [services.httpd.group](options.html#opt-services.httpd.group)). As a consequence, all files that are needed for httpd to run (included configuration fragments, SSL certificates and keys, etc.) must now be readable by this less privileged user/group. + + The default value for [services.httpd.mpm](options.html#opt-services.httpd.mpm) has been changed from `prefork` to `event`. Along with this change the default value for [services.httpd.virtualHosts.\.http2](options.html#opt-services.httpd.virtualHosts) has been set to `true`. + +- The `systemd-networkd` option `systemd.network.networks..dhcp.CriticalConnection` has been removed following upstream systemd\'s deprecation of the same. It is recommended to use `systemd.network.networks..networkConfig.KeepConfiguration` instead. See systemd.network 5 for details. + +- The `systemd-networkd` option `systemd.network.networks._name_.dhcpConfig` has been renamed to [systemd.network.networks._name_.dhcpV4Config](options.html#opt-systemd.network.networks._name_.dhcpV4Config) following upstream systemd\'s documentation change. See systemd.network 5 for details. + +- In the `picom` module, several options that accepted floating point numbers encoded as strings (for example [services.picom.activeOpacity](options.html#opt-services.picom.activeOpacity)) have been changed to the (relatively) new native `float` type. To migrate your configuration simply remove the quotes around the numbers. + +- When using `buildBazelPackage` from Nixpkgs, `flat` hash mode is now used for dependencies instead of `recursive`. This is to better allow using hashed mirrors where needed. As a result, these hashes will have changed. + +- The syntax of the PostgreSQL configuration file is now checked at build time. If your configuration includes a file inaccessible inside the build sandbox, set `services.postgresql.checkConfig` to `false`. + +- The rkt module has been removed, it was archived by upstream. + +- The [Bazaar](https://bazaar.canonical.com) VCS is unmaintained and, as consequence of the Python 2 EOL, the packages `bazaar` and `bazaarTools` were removed. Breezy, the backward compatible fork of Bazaar (see the [announcement](https://www.jelmer.uk/breezy-intro.html)), was packaged as `breezy` and can be used instead. + + Regarding Nixpkgs, `fetchbzr`, `nix-prefetch-bzr` and Bazaar support in Hydra will continue to work through Breezy. + +- In addition to the hostname, the fully qualified domain name (FQDN), which consists of `${networking.hostName}` and `${networking.domain}` is now added to `/etc/hosts`, to allow local FQDN resolution, as used by the `hostname --fqdn` command and other applications that try to determine the FQDN. These new entries take precedence over entries from the DNS which could cause regressions in some very specific setups. Additionally the hostname is now resolved to `127.0.0.2` instead of `127.0.1.1` to be consistent with what `nss-myhostname` (from systemd) returns. The old behaviour can e.g. be restored by using `networking.hosts = lib.mkForce { "127.0.1.1" = [ config.networking.hostName ]; };`. + +- The hostname (`networking.hostName`) must now be a valid DNS label (see RFC 1035, RFC 1123) and as such must not contain the domain part. This means that the hostname must start with a letter or digit, end with a letter or digit, and have as interior characters only letters, digits, and hyphen. The maximum length is 63 characters. Additionally it is recommended to only use lower-case characters. If (e.g. for legacy reasons) a FQDN is required as the Linux kernel network node hostname (`uname --nodename`) the option `boot.kernel.sysctl."kernel.hostname"` can be used as a workaround (but be aware of the 64 character limit). + +- The GRUB specific option `boot.loader.grub.extraInitrd` has been replaced with the generic option `boot.initrd.secrets`. This option creates a secondary initrd from the specified files, rather than using a manually created initrd file. Due to an existing bug with `boot.loader.grub.extraInitrd`, it is not possible to directly boot an older generation that used that option. It is still possible to rollback to that generation if the required initrd file has not been deleted. + +- The [DNSChain](https://github.com/okTurtles/dnschain) package and NixOS module have been removed from Nixpkgs as the software is unmaintained and can\'t be built. For more information see issue [\#89205](https://github.com/NixOS/nixpkgs/issues/89205). + +- In the `resilio` module, [services.resilio.httpListenAddr](options.html#opt-services.resilio.httpListenAddr) has been changed to listen to `[::1]` instead of `0.0.0.0`. + +- `sslh` has been updated to version `1.21`. The `ssl` probe must be renamed to `tls` in [services.sslh.appendConfig](options.html#opt-services.sslh.appendConfig). + +- Users of [OpenAFS 1.6](http://openafs.org) must upgrade their services to OpenAFS 1.8! In this release, the OpenAFS package version 1.6.24 is marked broken but can be used during transition to OpenAFS 1.8.x. Use the options `services.openafsClient.packages.module`, `services.openafsClient.packages.programs` and `services.openafsServer.package` to select a different OpenAFS package. OpenAFS 1.6 will be removed in the next release. The package `openafs` and the service options will then silently point to the OpenAFS 1.8 release. + + See also the OpenAFS [Administrator Guide](http://docs.openafs.org/AdminGuide/index.html) for instructions. Beware of the following when updating servers: + + - The storage format of the server key has changed and the key must be converted before running the new release. + + - When updating multiple database servers, turn off the database servers from the highest IP down to the lowest with resting periods in between. Start up in reverse order. Do not concurrently run database servers working with different OpenAFS releases! + + - Update servers first, then clients. + +- Radicale\'s default package has changed from 2.x to 3.x. An upgrade checklist can be found [here](https://github.com/Kozea/Radicale/blob/3.0.x/NEWS.md#upgrade-checklist). You can use the newer version in the NixOS service by setting the `package` to `radicale3`, which is done automatically if `stateVersion` is 20.09 or higher. + +- `udpt` experienced a complete rewrite from C++ to rust. The configuration format changed from ini to toml. The new configuration documentation can be found at [the official website](https://naim94a.github.io/udpt/config.html) and example configuration is packaged in `${udpt}/share/udpt/udpt.toml`. + +- We now have a unified [services.xserver.displayManager.autoLogin](options.html#opt-services.xserver.displayManager.autoLogin) option interface to be used for every display-manager in NixOS. + +- The `bitcoind` module has changed to multi-instance, using submodules. Therefore, it is now mandatory to name each instance. To use this new multi-instance config with an existing bitcoind data directory and user, you have to adjust the original config, e.g.: + + ```nix + { + services.bitcoind = { + enable = true; + extraConfig = "..."; + ... + }; + } + ``` + + To something similar: + + ```nix + { + services.bitcoind.mainnet = { + enable = true; + dataDir = "/var/lib/bitcoind"; + user = "bitcoin"; + extraConfig = "..."; + ... + }; + } + ``` + + The key settings are: + + - `dataDir` - to continue using the same data directory. + + - `user` - to continue using the same user so that bitcoind maintains access to its files. + +- Graylog introduced a change in the LDAP server certificate validation behaviour for version 3.3.3 which might break existing setups. When updating Graylog from a version before 3.3.3 make sure to check the Graylog [release info](https://www.graylog.org/post/announcing-graylog-v3-3-3) for information on how to avoid the issue. + +- The `dokuwiki` module has changed to multi-instance, using submodules. Therefore, it is now mandatory to name each instance. Moreover, forcing SSL by default has been dropped, so `nginx.forceSSL` and `nginx.enableACME` are no longer set to `true`. To continue using your service with the original SSL settings, you have to adjust the original config, e.g.: + + ```nix + { + services.dokuwiki = { + enable = true; + ... + }; + } + ``` + + To something similar: + + ```nix + { + services.dokuwiki."mywiki" = { + enable = true; + nginx = { + forceSSL = true; + enableACME = true; + }; + ... + }; + } + ``` + + The base package has also been upgraded to the 2020-07-29 \"Hogfather\" release. Plugins might be incompatible or require upgrading. + +- The [services.postgresql.dataDir](options.html#opt-services.postgresql.dataDir) option is now set to `"/var/lib/postgresql/${cfg.package.psqlSchema}"` regardless of your [system.stateVersion](options.html#opt-system.stateVersion). Users with an existing postgresql install that have a [system.stateVersion](options.html#opt-system.stateVersion) of `17.03` or below should double check what the value of their [services.postgresql.dataDir](options.html#opt-services.postgresql.dataDir) option is (`/var/db/postgresql`) and then explicitly set this value to maintain compatibility: + + ```nix + { + services.postgresql.dataDir = "/var/db/postgresql"; + } + ``` + + The postgresql module now expects there to be a database super user account called `postgres` regardless of your [system.stateVersion](options.html#opt-system.stateVersion). Users with an existing postgresql install that have a [system.stateVersion](options.html#opt-system.stateVersion) of `17.03` or below should run the following SQL statements as a database super admin user before upgrading: + + ```SQL + CREATE ROLE postgres LOGIN SUPERUSER; + ``` + +- The USBGuard module now removes options and instead hardcodes values for `IPCAccessControlFiles`, `ruleFiles`, and `auditFilePath`. Audit logs can be found in the journal. + +- The NixOS module system now evaluates option definitions more strictly, allowing it to detect a larger set of problems. As a result, what previously evaluated may not do so anymore. See [the PR that changed this](https://github.com/NixOS/nixpkgs/pull/82743#issuecomment-674520472) for more info. + +- For NixOS configuration options, the type `loaOf`, after its initial deprecation in release 20.03, has been removed. In NixOS and Nixpkgs options using this type have been converted to `attrsOf`. For more information on this change have look at these links: [issue \#1800](https://github.com/NixOS/nixpkgs/issues/1800), [PR \#63103](https://github.com/NixOS/nixpkgs/pull/63103). + +- `config.systemd.services.${name}.path` now returns a list of paths instead of a colon-separated string. + +- Caddy module now uses Caddy v2 by default. Caddy v1 can still be used by setting [services.caddy.package](options.html#opt-services.caddy.package) to `pkgs.caddy1`. + + New option [services.caddy.adapter](options.html#opt-services.caddy.adapter) has been added. + +- The [jellyfin](options.html#opt-services.jellyfin.enable) module will use and stay on the Jellyfin version `10.5.5` if `stateVersion` is lower than `20.09`. This is because significant changes were made to the database schema, and it is highly recommended to backup your instance before upgrading. After making your backup, you can upgrade to the latest version either by setting your `stateVersion` to `20.09` or higher, or set the `services.jellyfin.package` to `pkgs.jellyfin`. If you do not wish to upgrade Jellyfin, but want to change your `stateVersion`, you can set the value of `services.jellyfin.package` to `pkgs.jellyfin_10_5`. + +- The `security.rngd` service is now disabled by default. This choice was made because there\'s krngd in the linux kernel space making it (for most usecases) functionally redundent. + +- The `hardware.nvidia.optimus_prime.enable` service has been renamed to `hardware.nvidia.prime.sync.enable` and has many new enhancements. Related nvidia prime settings may have also changed. + +- The package nextcloud17 has been removed and nextcloud18 was marked as insecure since both of them will [ will be EOL (end of life) within the lifetime of 20.09](https://docs.nextcloud.com/server/19/admin_manual/release_schedule.html). + + It\'s necessary to upgrade to nextcloud19: + + - From nextcloud17, you have to upgrade to nextcloud18 first as Nextcloud doesn\'t allow going multiple major revisions forward in a single upgrade. This is possible by setting [services.nextcloud.package](options.html#opt-services.nextcloud.package) to nextcloud18. + + - From nextcloud18, it\'s possible to directly upgrade to nextcloud19 by setting [services.nextcloud.package](options.html#opt-services.nextcloud.package) to nextcloud19. + +- The GNOME desktop manager no longer default installs gnome3.epiphany. It was chosen to do this as it has a usability breaking issue (see issue [\#98819](https://github.com/NixOS/nixpkgs/issues/98819)) that makes it unsuitable to be a default app. + + ::: {.note} + Issue [\#98819](https://github.com/NixOS/nixpkgs/issues/98819) is now fixed and gnome3.epiphany is once again installed by default. + ::: + +- If you want to manage the configuration of wpa_supplicant outside of NixOS you must ensure that none of [networking.wireless.networks](options.html#opt-networking.wireless.networks), [networking.wireless.extraConfig](options.html#opt-networking.wireless.extraConfig) or [networking.wireless.userControlled.enable](options.html#opt-networking.wireless.userControlled.enable) is being used or `true`. Using any of those options will cause wpa_supplicant to be started with a NixOS generated configuration file instead of your own. + +## Other Notable Changes {#sec-release-20.09-notable-changes} + +- SD images are now compressed by default using `zstd`. The compression for ISO images has also been changed to `zstd`, but ISO images are still not compressed by default. + +- `services.journald.rateLimitBurst` was updated from `1000` to `10000` to follow the new upstream systemd default. + +- The notmuch package move its emacs-related binaries and emacs lisp files to a separate output. They\'re not part of the default `out` output anymore - if you relied on the `notmuch-emacs-mua` binary or the emacs lisp files, access them via the `notmuch.emacs` output. Device tree overlay support was improved in [\#79370](https://github.com/NixOS/nixpkgs/pull/79370) and now uses [hardware.deviceTree.kernelPackage](options.html#opt-hardware.deviceTree.kernelPackage) instead of `hardware.deviceTree.base`. [hardware.deviceTree.overlays](options.html#opt-hardware.deviceTree.overlays) configuration was extended to support `.dts` files with symbols. Device trees can now be filtered by setting [hardware.deviceTree.filter](options.html#opt-hardware.deviceTree.filter) option. + +- The default output of `buildGoPackage` is now `$out` instead of `$bin`. + +- `buildGoModule` `doCheck` now defaults to `true`. + +- Packages built using `buildRustPackage` now use `release` mode for the `checkPhase` by default. + + Please note that Rust packages utilizing a custom build/install procedure (e.g. by using a `Makefile`) or test suites that rely on the structure of the `target/` directory may break due to those assumptions. For further information, please read the Rust section in the Nixpkgs manual. + +- The cc- and binutils-wrapper\'s \"infix salt\" and `_BUILD_` and `_TARGET_` user infixes have been replaced with with a \"suffix salt\" and suffixes and `_FOR_BUILD` and `_FOR_TARGET`. This matches the autotools convention for env vars which standard for these things, making interfacing with other tools easier. + +- Additional Git documentation (HTML and text files) is now available via the `git-doc` package. + +- Default algorithm for ZRAM swap was changed to `zstd`. + +- The installer now enables sshd by default. This improves installation on headless machines especially ARM single-board-computer. To login through ssh, either a password or an ssh key must be set for the root user or the nixos user. + +- The scripted networking system now uses `.link` files in `/etc/systemd/network` to configure mac address and link MTU, instead of the sometimes buggy `network-link-*` units, which have been removed. Bringing the interface up has been moved to the beginning of the `network-addresses-*` unit. Note this doesn\'t require `systemd-networkd` - it\'s udev that parses `.link` files. Extra care needs to be taken in the presence of [legacy udev rules](https://wiki.debian.org/NetworkInterfaceNames#THE_.22PERSISTENT_NAMES.22_SCHEME) to rename interfaces, as MAC Address and MTU defined in these options can only match on the original link name. In such cases, you most likely want to create a `10-*.link` file through [systemd.network.links](options.html#opt-systemd.network.links) and set both name and MAC Address / MTU there. + +- Grafana received a major update to version 7.x. A plugin is now needed for image rendering support, and plugins must now be signed by default. More information can be found [in the Grafana documentation](https://grafana.com/docs/grafana/latest/installation/upgrading/#upgrading-to-v7-0). + +- The `hardware.u2f` module, which was installing udev rules was removed, as udev gained native support to handle FIDO security tokens. + +- The `services.transmission` module was enhanced with the new options: [services.transmission.credentialsFile](options.html#opt-services.transmission.credentialsFile), [services.transmission.openFirewall](options.html#opt-services.transmission.openFirewall), and [services.transmission.performanceNetParameters](options.html#opt-services.transmission.performanceNetParameters). + + `transmission-daemon` is now started with additional systemd sandbox/hardening options for better security. Please [report](https://github.com/NixOS/nixpkgs/issues) any use case where this is not working well. In particular, the `RootDirectory` option newly set forbids uploading or downloading a torrent outside of the default directory configured at [settings.download-dir](options.html#opt-services.transmission.settings). If you really need Transmission to access other directories, you must include those directories into the `BindPaths` of the service: + + ```nix + { + systemd.services.transmission.serviceConfig.BindPaths = [ "/path/to/alternative/download-dir" ]; + } + ``` + + Also, connection to the RPC (Remote Procedure Call) of `transmission-daemon` is now only available on the local network interface by default. Use: + + ```nix + { + services.transmission.settings.rpc-bind-address = "0.0.0.0"; + } + ``` + + to get the previous behavior of listening on all network interfaces. + +- With this release `systemd-networkd` (when enabled through [networking.useNetworkd](options.html#opt-networking.useNetworkd)) has it\'s netlink socket created through a `systemd.socket` unit. This gives us control over socket buffer sizes and other parameters. For larger setups where networkd has to create a lot of (virtual) devices the default buffer size (currently 128MB) is not enough. + + On a machine with \>100 virtual interfaces (e.g., wireguard tunnels, VLANs, ...), that all have to be brought up during system startup, the receive buffer size will spike for a brief period. Eventually some of the message will be dropped since there is not enough (permitted) buffer space available. + + By having `systemd-networkd` start with a netlink socket created by `systemd` we can configure the `ReceiveBufferSize=` parameter in the socket options (i.e. `systemd.sockets.systemd-networkd.socketOptions.ReceiveBufferSize`) without recompiling `systemd-networkd`. + + Since the actual memory requirements depend on hardware, timing, exact configurations etc. it isn\'t currently possible to infer a good default from within the NixOS module system. Administrators are advised to monitor the logs of `systemd-networkd` for `rtnl: kernel receive buffer overrun` spam and increase the memory limit as they see fit. + + Note: Increasing the `ReceiveBufferSize=` doesn\'t allocate any memory. It just increases the upper bound on the kernel side. The memory allocation depends on the amount of messages that are queued on the kernel side of the netlink socket. + +- Specifying [mailboxes](options.html#opt-services.dovecot2.mailboxes) in the dovecot2 module as a list is deprecated and will break eval in 21.05. Instead, an attribute-set should be specified where the `name` should be the key of the attribute. + + This means that a configuration like this + + ```nix + { + services.dovecot2.mailboxes = [ + { name = "Junk"; + auto = "create"; + } + ]; + } + ``` + + should now look like this: + + ```nix + { + services.dovecot2.mailboxes = { + Junk.auto = "create"; + }; + } + ``` + +- netbeans was upgraded to 12.0 and now defaults to OpenJDK 11. This might cause problems if your projects depend on packages that were removed in Java 11. + +- nextcloud has been updated to [v19](https://nextcloud.com/blog/nextcloud-hub-brings-productivity-to-home-office/). + + If you have an existing installation, please make sure that you\'re on nextcloud18 before upgrading to nextcloud19 since Nextcloud doesn\'t support upgrades across multiple major versions. + +- The `nixos-run-vms` script now deletes the previous run machines states on test startup. You can use the `--keep-vm-state` flag to match the previous behaviour and keep the same VM state between different test runs. + +- The [nix.buildMachines](options.html#opt-nix.buildMachines) option is now type-checked. There are no functional changes, however this may require updating some configurations to use correct types for all attributes. + +- The `fontconfig` module stopped generating config and cache files for fontconfig 2.10.x, the `/etc/fonts/fonts.conf` now belongs to the latest fontconfig, just like on other Linux distributions, and we will [no longer](https://github.com/NixOS/nixpkgs/pull/95358) be versioning the config directories. + + Fontconfig 2.10.x was removed from Nixpkgs since it hasn't been used in any Nixpkgs package for years now. + +- Nginx module `nginxModules.fastcgi-cache-purge` renamed to official name `nginxModules.cache-purge`. Nginx module `nginxModules.ngx_aws_auth` renamed to official name `nginxModules.aws-auth`. + +- The option `defaultPackages` was added. It installs the packages perl, rsync and strace for now. They were added unconditionally to `systemPackages` before, but are not strictly necessary for a minimal NixOS install. You can set it to an empty list to have a more minimal system. Be aware that some functionality might still have an impure dependency on those packages, so things might break. + +- The `undervolt` option no longer needs to apply its settings every 30s. If they still become undone, open an issue and restore the previous behaviour using `undervolt.useTimer`. + +- Agda has been heavily reworked. + + - `agda.mkDerivation` has been heavily changed and is now located at agdaPackages.mkDerivation. + + - New top-level packages agda and `agda.withPackages` have been added, the second of which sets up agda with access to chosen libraries. + + - All agda libraries now live under `agdaPackages`. + + - Many broken libraries have been removed. + + See the [new documentation](https://nixos.org/nixpkgs/manual/#agda) for more information. + +- The `deepin` package set has been removed from nixpkgs. It was a work in progress to package the [Deepin Desktop Environment (DDE)](https://www.deepin.org/en/dde/), including libraries, tools and applications, and it was still missing a service to launch the desktop environment. It has shown to no longer be a feasible goal due to reasons discussed in [issue \#94870](https://github.com/NixOS/nixpkgs/issues/94870). The package `netease-cloud-music` has also been removed, as it depends on libraries from deepin. + +- The `opendkim` module now uses systemd sandboxing features to limit the exposure of the system towards the opendkim service. + +- Kubernetes has been upgraded to 1.19.1, which also means that the golang version to build it has been bumped to 1.15. This may have consequences for your existing clusters and their certificates. Please consider [ the release notes for Kubernetes 1.19 carefully ](https://relnotes.k8s.io/?markdown=93264) before upgrading. + +- For AMD GPUs, Vulkan can now be used by adding `amdvlk` to `hardware.opengl.extraPackages`. + +- Similarly, still for AMD GPUs, the ROCm OpenCL stack can now be used by adding `rocm-opencl-icd` to `hardware.opengl.extraPackages`. + +## Contributions {#sec-release-20.09-contributions} + +I, Jonathan Ringer, would like to thank the following individuals for their work on nixpkgs. This release could not be done without the hard work of the NixOS community. There were 31282 contributions across 1313 contributors. + +1. 2288 Mario Rodas + +2. 1837 Frederik Rietdijk + +3. 946 Jörg Thalheim + +4. 925 Maximilian Bosch + +5. 687 Jonathan Ringer + +6. 651 Jan Tojnar + +7. 622 Daniël de Kok + +8. 605 WORLDofPEACE + +9. 597 Florian Klink + +10. 528 José Romildo Malaquias + +11. 281 volth + +12. 101 Robert Scott + +13. 86 Tim Steinbach + +14. 76 WORLDofPEACE + +15. 49 Maximilian Bosch + +16. 42 Thomas Tuegel + +17. 37 Doron Behar + +18. 36 Vladimír Čunát + +19. 27 Jonathan Ringer + +20. 27 Maciej Krüger + +I, Jonathan Ringer, would also like to personally thank \@WORLDofPEACE for their help in mentoring me on the release process. Special thanks also goes to Thomas Tuegel for helping immensely with stabilizing Qt, KDE, and Plasma5; I would also like to thank Robert Scott for his numerous fixes and pull request reviews. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2009.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2009.xml deleted file mode 100644 index 49446afdea..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2009.xml +++ /dev/null @@ -1,1838 +0,0 @@ -
- Release 20.09 (“Nightingale”, 2020.10/27) - - - Support is planned until the end of June 2021, handing over to 21.05. - (Plans - have shifted by two months since release of 20.09.) - -
- Highlights - - - In addition to 7349 new, 14442 updated, and 8181 removed packages, this release has the - following highlights: - - - - - - Core version changes: - - - - - gcc: 9.2.0 -> 9.3.0 - - - - - glibc: 2.30 -> 2.31 - - - - - linux: still defaults to 5.4.x, all supported kernels available - - - - - mesa: 19.3.5 -> 20.1.7 - - - - - - - Desktop Environments: - - - - - plasma5: 5.17.5 -> 5.18.5 - - - - - kdeApplications: 19.12.3 -> 20.08.1 - - - - - gnome3: 3.34 -> 3.36, see its release notes - - - - - cinnamon: added at 4.6 - - - - - NixOS now distributes an official GNOME ISO - - - - - - - - Programming Languages and Frameworks: - - - - - - Agda ecosystem was heavily reworked (see more details below) - - - - - PHP now defaults to PHP 7.4, updated from 7.3 - - - - - PHP 7.2 is no longer supported due to upstream not supporting this version for the entire lifecycle of the 20.09 release - - - - - Python 3 now defaults to Python 3.8 instead of 3.7 - - - - - Python 3.5 reached its upstream EOL at the end of September 2020: it - has been removed from the list of available packages - - - - - - - - Databases and Service Monitoring: - - - - - MariaDB has been updated to 10.4, MariaDB Galera to 26.4. Please read the related upgrade instructions under backwards incompatibilities before upgrading. - - - - - Zabbix now defaults to 5.0, updated from 4.4. Please read related sections under backwards compatibilities before upgrading. - - - - - - - - Major module changes: - - - - - Quickly configure a complete, private, self-hosted video - conferencing solution with the new Jitsi Meet module. - - - - - Two new options, authorizedKeysCommand - and authorizedKeysCommandUser, have - been added to the openssh module. If you have AuthorizedKeysCommand - in your services.openssh.extraConfig you should - make use of these new options instead. - - - - - There is a new module for Podman (virtualisation.podman), a drop-in replacement for the Docker command line. - - - - - The new virtualisation.containers module manages configuration shared by the CRI-O and Podman modules. - - - - - Declarative Docker containers are renamed from docker-containers to virtualisation.oci-containers.containers. - This is to make it possible to use podman instead of docker. - - - - - The new option documentation.man.generateCaches - has been added to automatically generate the man-db caches, which are needed by utilities - like whatis and apropos. The caches are generated during the build of - the NixOS configuration: since this can be expensive when a large number of packages are installed, the - feature is disabled by default. - - - - - services.postfix.sslCACert was replaced by services.postfix.tlsTrustedAuthorities which now defaults to system certificate authorities. - - - - - The various documented workarounds to use steam have been converted to a module. programs.steam.enable enables steam, controller support and the workarounds. - - - - - Support for built-in LCDs in various pieces of Logitech hardware (keyboards and USB speakers). hardware.logitech.lcd.enable enables support for all hardware supported by the g15daemon project. - - - - - The GRUB module gained support for basic password protection, which - allows to restrict non-default entries in the boot menu to one or more - users. The users and passwords are defined via the option - . - Note: Password support is only available in GRUB version 2. - - - - - - - - NixOS module changes: - - - - - The NixOS module system now supports freeform modules as a mix between types.attrsOf and types.submodule. These allow you to explicitly declare a subset of options while still permitting definitions without an associated option. See for how to use them. - - - - - Following its deprecation in 20.03, the Perl NixOS test driver has been removed. - All remaining tests have been ported to the Python test framework. - Code outside nixpkgs using make-test.nix or - testing.nix needs to be ported to - make-test-python.nix and - testing-python.nix respectively. - - - - - Subordinate GID and UID mappings are now set up automatically for all normal users. - This will make container tools like Podman work as non-root users out of the box. - - - - - - - Starting with this release, the hydra-build-result - nixos-YY.MM - branches no longer exist in the deprecated - nixpkgs-channels repository. These branches are now in - the main nixpkgs - repository. - - - -
- -
- New Services - - - In addition to 1119 new, 118 updated, and 476 removed options; 61 new modules were added since the last release: - - - - - - Hardware: - - - - - adds easy support of system76 firmware - - - - - loads uinput kernel module - - - - - enable good defaults for HiDPI displays - - - - - support for Wooting keyboards - - - - - xpadneo driver for Xbox One wireless controllers - - - - - - - Programs: - - - - - enable hamster time tracking - - - - - adds easy enablement of steam and related system configuration - - - - - - - Security: - - - - - alternative to sudo, allows non-root users to execute commands as root - - - - - add Trusted Platform Module 2 support - - - - - - - System: - - - - - start an OpenVPN client during initrd boot - - - - - - - Virtualization: - - - - - use nixos-containers - - - - - run OCI (Docker) containers - - - - - daemonless container engine - - - - - - - - Services: - - - - - Anki sync server - - - - - Subtitle manager for Sonarr and Radarr - - - - - Biboumi XMPP gateway to IRC - - - - - Blockbook-frontend, a service for the Trezor wallet - - - - - Wayland cage service - - - - - IRC daemon, which can be accessed throught the browser - - - - - Tool for coordinating volunteers and shifts on large events - - - - - text-expander written in rust - - - - - Folding@home client - - - - - Web-based team code collaboration tool - - - - - Matrix bot - - - - - xow as a systemd service - - - - - Hercules CI build agent - - - - - Jitsi Conference Focus, component of Jitsi Meet - - - - - A web file repository - - - - - Secure, simple and scalable video conferences - - - - - Jitsi Videobridge, a WebRTC compatible router - - - - - Jupyterhub development server - - - - - Lightweight Kubernetes distribution - - - - - Magic Wormhole Mailbox Server - - - - - Parental Control support - - - - - Matrix and Discord bridge - - - - - Matrix-Telegram puppeting/relaybot bridge - - - - - Japanese DTV Tuner Server Service - - - - - Molly-Brown Gemini server - - - - - Mullvad VPN daemon - - - - - Namecoin to DNS bridge - - - - - NextDNS to DoH Proxy service - - - - - Google storage bucket to be used as a nix store - - - - - OneDrive sync service - - - - - Pastebin-like service - - - - - Manage network booting of machines - - - - - Privacy authentication server - - - - - Quorum blockchain daemon - - - - - RobustIRC bridge - - - - - Generate RSS and Atom feeds - - - - - rTorrent service - - - - - SmartDNS DNS server - - - - - SOGo groupware - - - - - Teeworlds game server - - - - - torque computing node - - - - - torque server - - - - - A total uptime service - - - - - X11 remote server - - - - - Wasabi backend service - - - - - Yubikey agent - - - - - Zigbee to MQTT bridge - - - - - - - -
- -
- Backward Incompatibilities - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - - MariaDB has been updated to 10.4, MariaDB Galera to 26.4. - Before you upgrade, it would be best to take a backup of your database. - For MariaDB Galera Cluster, see Upgrading - from MariaDB 10.3 to MariaDB 10.4 with Galera Cluster instead. - Before doing the upgrade read Incompatible - Changes Between 10.3 and 10.4. - After the upgrade you will need to run mysql_upgrade. - MariaDB 10.4 introduces a number of changes to the authentication process, intended to make things easier and more - intuitive. See Authentication from MariaDB 10.4. - unix_socket auth plugin does not use a password, and uses the connecting user's UID instead. When a new MariaDB data directory is initialized, two MariaDB users are - created and can be used with new unix_socket auth plugin, as well as traditional mysql_native_password plugin: root@localhost and mysql@localhost. To actually use - the traditional mysql_native_password plugin method, one must run the following: - -services.mysql.initialScript = pkgs.writeText "mariadb-init.sql" '' - ALTER USER root@localhost IDENTIFIED VIA mysql_native_password USING PASSWORD("verysecret"); -''; - - When MariaDB data directory is just upgraded (not initialized), the users are not created or modified. - - - - - MySQL server is now started with additional systemd sandbox/hardening options for better security. The PrivateTmp, ProtectHome, and ProtectSystem options - may be problematic when MySQL is attempting to read from or write to your filesystem anywhere outside of its own state directory, for example when - calling LOAD DATA INFILE or SELECT * INTO OUTFILE. In this scenario a variant of the following may be required: - - allow MySQL to read from /home and /tmp directories when using LOAD DATA INFILE - -systemd.services.mysql.serviceConfig.ProtectHome = lib.mkForce "read-only"; - - - allow MySQL to write to custom folder /var/data when using SELECT * INTO OUTFILE, assuming the mysql user has write - access to /var/data - -systemd.services.mysql.serviceConfig.ReadWritePaths = [ "/var/data" ]; - - - - The MySQL service no longer runs its systemd service startup script as root anymore. A dedicated non root - super user account is required for operation. This means users with an existing MySQL or MariaDB database server are required to run the following SQL statements - as a super admin user before upgrading: - -CREATE USER IF NOT EXISTS 'mysql'@'localhost' identified with unix_socket; -GRANT ALL PRIVILEGES ON *.* TO 'mysql'@'localhost' WITH GRANT OPTION; - - If you use MySQL instead of MariaDB please replace unix_socket with auth_socket. If you have changed the value of - from the default of mysql to a different user please change 'mysql'@'localhost' to the corresponding user instead. - - - - - - Zabbix now defaults to 5.0, updated from 4.4. Please carefully read through - the upgrade guide - and apply any changes required. Be sure to take special note of the section on - enabling extended range of numeric (float) values - as you will need to apply this database migration manually. - - - If you are using Zabbix Server with a MySQL or MariaDB database you should note that using a character set of utf8 and a collate of utf8_bin has become mandatory with - this release. See the upstream issue for further discussion. Before upgrading you should check the character set and collation used by - your database and ensure they are correct: - - SELECT - default_character_set_name, - default_collation_name - FROM - information_schema.schemata - WHERE - schema_name = 'zabbix'; - - If these values are not correct you should take a backup of your database and convert the character set and collation as required. Here is an - example of how to do so, taken from - the Zabbix forums: - - ALTER DATABASE `zabbix` DEFAULT CHARACTER SET utf8 COLLATE utf8_bin; - - -- the following will produce a list of SQL commands you should subsequently execute - SELECT CONCAT("ALTER TABLE ", TABLE_NAME," CONVERT TO CHARACTER SET utf8 COLLATE utf8_bin;") AS ExecuteTheString - FROM information_schema.`COLUMNS` - WHERE table_schema = "zabbix" AND COLLATION_NAME = "utf8_general_ci"; - - - - - - - maxx package removed along with services.xserver.desktopManager.maxx module. - Please migrate to cdesktopenv and services.xserver.desktopManager.cde module. - - - - - The matrix-synapse module no longer includes optional dependencies by default, they have to be added through the plugins option. - - - - - buildGoModule now internally creates a vendor directory - in the source tree for downloaded modules instead of using go's module - proxy protocol. This storage format is simpler and therefore less - likely to break with future versions of go. As a result - buildGoModule switched from - modSha256 to the vendorSha256 - attribute to pin fetched version data. - - - - - Grafana is now built without support for phantomjs by default. Phantomjs support has been - deprecated in Grafana - and the phantomjs project is - currently unmaintained. - It can still be enabled by providing phantomJsSupport = true to the package instantiation: -{ - services.grafana.package = pkgs.grafana.overrideAttrs (oldAttrs: rec { - phantomJsSupport = true; - }); -} - - - - - The supybot module now uses /var/lib/supybot - as its default stateDir path if stateVersion - is 20.09 or higher. It also enables a number of - systemd sandboxing options - which may possibly interfere with some plugins. If this is the case you can disable the options through attributes in - . - - - - - The security.duosec.skey option, which stored a secret in the - nix store, has been replaced by a new - security.duosec.secretKeyFile - option for better security. - - - security.duosec.ikey has been renamed to - security.duosec.integrationKey. - - - - - vmware has been removed from the services.x11.videoDrivers defaults. - For VMWare guests set virtualisation.vmware.guest.enable to true which will include the appropriate drivers. - - - - - The initrd SSH support now uses OpenSSH rather than Dropbear to - allow the use of Ed25519 keys and other OpenSSH-specific - functionality. Host keys must now be in the OpenSSH format, and at - least one pre-generated key must be specified. - - - If you used the - options, you'll get an error explaining how to convert your host - keys and migrate to the new - option. - Otherwise, if you don't have any host keys set, you'll need to - generate some; see the option - documentation for instructions. - - - - - Since this release there's an easy way to customize your PHP - install to get a much smaller base PHP with only wanted - extensions enabled. See the following snippet installing a - smaller PHP with the extensions imagick, - opcache, pdo and - pdo_mysql loaded: - - -environment.systemPackages = [ - (pkgs.php.withExtensions - ({ all, ... }: with all; [ - imagick - opcache - pdo - pdo_mysql - ]) - ) -]; - - The default php attribute hasn't lost any - extensions. The opcache extension has been - added. - - All upstream PHP extensions are available under ]]>. - - - All PHP config flags have been removed for - the following reasons: - - - - - The updated php attribute is now easily - customizable to your liking by using - php.withExtensions or - php.buildEnv instead of writing config files - or changing configure flags. - - - - - The remaining configuration flags can now be set directly on - the php attribute. For example, instead of - - -php.override { - config.php.embed = true; - config.php.apxs2 = false; -} - - - you should now write - - -php.override { - embedSupport = true; - apxs2Support = false; -} - - - - - - - - - - The ACME module has been overhauled for simplicity and maintainability. - Cert generation now implicitly uses the acme - user, and the security.acme.certs._name_.user option - has been removed. Instead, certificate access from other services is now - managed through group permissions. The module no longer runs lego - twice under certain conditions, and will correctly renew certificates if - their configuration is changed. Services which reload nginx and httpd after - certificate renewal are now properly configured too so you no longer have - to do this manually if you are using HTTPS enabled virtual hosts. A mechanism - for regenerating certs on demand has also been added and documented. - - - - - Gollum received a major update to version 5.x and you may have to change - some links in your wiki when migrating from gollum 4.x. More information - can be found - here. - - - - - Deluge 2.x was added and is used as default for new NixOS - installations where stateVersion is >= 20.09. If you are upgrading from a previous - NixOS version, you can set service.deluge.package = pkgs.deluge-2_x - to upgrade to Deluge 2.x and migrate the state to the new format. - Be aware that backwards state migrations are not supported by Deluge. - - - - - Nginx web server now starting with additional sandbox/hardening options. By default, write access - to /var/log/nginx and /var/cache/nginx is allowed. To allow writing to other folders, - use systemd.services.nginx.serviceConfig.ReadWritePaths - -systemd.services.nginx.serviceConfig.ReadWritePaths = [ "/var/www" ]; - - - - Nginx is also started with the systemd option ProtectHome = mkDefault true; - which forbids it to read anything from /home, /root - and /run/user (see - ProtectHome docs - for details). - If you require serving files from home directories, you may choose to set e.g. - -systemd.services.nginx.serviceConfig.ProtectHome = "read-only"; - - - - - - The NixOS options nesting.clone and - nesting.children have been deleted, and - replaced with named - configurations. - - - - Replace a nesting.clone entry with: - -{ -specialisation.example-sub-configuration = { - configuration = { - ... - }; -}; - - - - Replace a nesting.children entry with: - -{ -specialisation.example-sub-configuration = { - inheritParentConfig = false; - configuration = { - ... - }; -}; - - - - To switch to a specialised configuration at runtime you need to - run: - -# sudo /run/current-system/specialisation/example-sub-configuration/bin/switch-to-configuration test - - Before you would have used: - -# sudo /run/current-system/fine-tune/child-1/bin/switch-to-configuration test - - - - - - The Nginx log directory has been moved to /var/log/nginx, the cache directory - to /var/cache/nginx. The option services.nginx.stateDir has - been removed. - - - - - The httpd web server previously started its main process as root - privileged, then ran worker processes as a less privileged identity user. - This was changed to start all of httpd as a less privileged user (defined by - and - ). As a consequence, all files that - are needed for httpd to run (included configuration fragments, SSL - certificates and keys, etc.) must now be readable by this less privileged - user/group. - - - The default value for - has been changed from prefork to event. Along with - this change the default value for - services.httpd.virtualHosts.<name>.http2 - has been set to true. - - - - - The systemd-networkd option - systemd.network.networks.<name>.dhcp.CriticalConnection - has been removed following upstream systemd's deprecation of the same. It is recommended to use - systemd.network.networks.<name>.networkConfig.KeepConfiguration instead. - See systemd.network - 5 for details. - - - - - The systemd-networkd option - systemd.network.networks._name_.dhcpConfig - has been renamed to - - following upstream systemd's documentation change. - See systemd.network - 5 for details. - - - - - In the picom module, several options that accepted - floating point numbers encoded as strings (for example - ) have been changed - to the (relatively) new native float type. To migrate - your configuration simply remove the quotes around the numbers. - - - - - When using buildBazelPackage from Nixpkgs, - flat hash mode is now used for dependencies - instead of recursive. This is to better allow - using hashed mirrors where needed. As a result, these hashes - will have changed. - - - - - The syntax of the PostgreSQL configuration file is now checked at build - time. If your configuration includes a file inaccessible inside the build - sandbox, set services.postgresql.checkConfig to - false. - - - - - The rkt module has been removed, it was archived by upstream. - - - - - The Bazaar VCS is - unmaintained and, as consequence of the Python 2 EOL, the packages - bazaar and bazaarTools were - removed. Breezy, the backward compatible fork of Bazaar (see the - announcement), - was packaged as breezy and can be used instead. - - - Regarding Nixpkgs, fetchbzr, - nix-prefetch-bzr and Bazaar support in Hydra will - continue to work through Breezy. - - - - - In addition to the hostname, the fully qualified domain name (FQDN), - which consists of ${networking.hostName} and - ${networking.domain} is now added to - /etc/hosts, to allow local FQDN resolution, as used by the - hostname --fqdn command and other applications that - try to determine the FQDN. These new entries take precedence over entries - from the DNS which could cause regressions in some very specific setups. - Additionally the hostname is now resolved to 127.0.0.2 - instead of 127.0.1.1 to be consistent with what - nss-myhostname (from systemd) returns. - The old behaviour can e.g. be restored by using - networking.hosts = lib.mkForce { "127.0.1.1" = [ config.networking.hostName ]; };. - - - - - The hostname (networking.hostName) must now be a valid - DNS label (see RFC 1035, RFC 1123) and as such must not contain the domain part. - This means that the hostname must start with a letter or digit, end with a letter - or digit, and have as interior characters only letters, digits, and - hyphen. The maximum length is 63 characters. Additionally it is - recommended to only use lower-case characters. - If (e.g. for legacy reasons) a FQDN is required as the Linux kernel network node hostname - (uname --nodename) the option - boot.kernel.sysctl."kernel.hostname" - can be used as a workaround (but be aware of the 64 character limit). - - - - - The GRUB specific option - has been replaced with the generic option - . This option creates a secondary - initrd from the specified files, rather than using a manually created - initrd file. - - Due to an existing bug with , - it is not possible to directly boot an older generation that used that - option. It is still possible to rollback to that generation if the required - initrd file has not been deleted. - - - - - The DNSChain - package and NixOS module have been removed from Nixpkgs as the software is - unmaintained and can't be built. For more information see issue - #89205. - - - - - In the resilio module, has been changed to listen to [::1] instead of 0.0.0.0. - - - - - sslh has been updated to version - 1.21. The ssl probe must be - renamed to tls in . - - - - - Users of OpenAFS 1.6 must - upgrade their services to OpenAFS 1.8! In this release, the OpenAFS package - version 1.6.24 is marked broken but can be used during transition to - OpenAFS 1.8.x. Use the options - , - and - to select a different - OpenAFS package. OpenAFS 1.6 will be removed in the next release. The - package openafs and the service options will then - silently point to the OpenAFS 1.8 release. - - - See also the OpenAFS Administrator - Guide for instructions. Beware of the following when updating - servers: - - - - The storage format of the server key has changed and the key must be converted before running the new release. - - - - - When updating multiple database servers, turn off the database servers - from the highest IP down to the lowest with resting periods in - between. Start up in reverse order. Do not concurrently run database - servers working with different OpenAFS releases! - - - - - Update servers first, then clients. - - - - - - - - Radicale's default package has changed from 2.x to 3.x. An upgrade - checklist can be found - here. - You can use the newer version in the NixOS service by setting the - package to radicale3, which is done - automatically if stateVersion is 20.09 or higher. - - - - - udpt experienced a complete rewrite from C++ to rust. The configuration format changed from ini to toml. - The new configuration documentation can be found at - the official website and example - configuration is packaged in ${udpt}/share/udpt/udpt.toml. - - - - - We now have a unified option interface - to be used for every display-manager in NixOS. - - - - - The bitcoind module has changed to multi-instance, using submodules. - Therefore, it is now mandatory to name each instance. - To use this new multi-instance config with an existing bitcoind data directory and user, - you have to adjust the original config, e.g.: - - services.bitcoind = { - enable = true; - extraConfig = "..."; - ... - }; - - To something similar: - - services.bitcoind.mainnet = { - enable = true; - dataDir = "/var/lib/bitcoind"; - user = "bitcoin"; - extraConfig = "..."; - ... - }; - - The key settings are: - - - - dataDir - to continue using the same data directory. - - - - - user - to continue using the same user so that bitcoind maintains access to its files. - - - - - - - - Graylog introduced a change in the LDAP server certificate validation behaviour for version 3.3.3 which might break existing setups. - When updating Graylog from a version before 3.3.3 make sure to check the Graylog release info for information on how to avoid the issue. - - - - - The dokuwiki module has changed to multi-instance, using submodules. - Therefore, it is now mandatory to name each instance. Moreover, forcing SSL by default has been dropped, so - nginx.forceSSL and nginx.enableACME are no longer set to true. - To continue using your service with the original SSL settings, you have to adjust the original config, e.g.: - -services.dokuwiki = { - enable = true; - ... -}; - - To something similar: - -services.dokuwiki."mywiki" = { - enable = true; - nginx = { - forceSSL = true; - enableACME = true; - }; - ... -}; - - The base package has also been upgraded to the 2020-07-29 "Hogfather" release. Plugins might be incompatible or require upgrading. - - - - - The option is now set to "/var/lib/postgresql/${cfg.package.psqlSchema}" regardless of your - . Users with an existing postgresql install that have a of 17.03 or below - should double check what the value of their option is (/var/db/postgresql) and then explicitly - set this value to maintain compatibility: - -services.postgresql.dataDir = "/var/db/postgresql"; - - - - The postgresql module now expects there to be a database super user account called postgres regardless of your . Users - with an existing postgresql install that have a of 17.03 or below should run the following SQL statements as a - database super admin user before upgrading: - -CREATE ROLE postgres LOGIN SUPERUSER; - - - - - - The USBGuard module now removes options and instead hardcodes values for IPCAccessControlFiles, ruleFiles, and auditFilePath. Audit logs can be found in the journal. - - - - - The NixOS module system now evaluates option definitions more strictly, allowing it to detect a larger set of problems. - As a result, what previously evaluated may not do so anymore. - See the PR that changed this for more info. - - - - - For NixOS configuration options, the type loaOf, after - its initial deprecation in release 20.03, has been removed. In NixOS and - Nixpkgs options using this type have been converted to attrsOf. - For more information on this change have look at these links: - issue #1800, - PR #63103. - - - - - config.systemd.services.${name}.path now returns a list of paths instead of a colon-separated string. - - - - - Caddy module now uses Caddy v2 by default. Caddy v1 can still be used by setting - to pkgs.caddy1. - - - New option has been added. - - - - - The jellyfin module will use and stay on the Jellyfin version 10.5.5 - if stateVersion is lower than 20.09. This is because significant changes were made to the database schema, - and it is highly recommended to backup your instance before upgrading. After making your backup, you can upgrade to the latest version either by - setting your stateVersion to 20.09 or higher, or set the to - pkgs.jellyfin. If you do not wish to upgrade Jellyfin, but want to change your stateVersion, you can set - the value of to pkgs.jellyfin_10_5. - - - - - The security.rngd service is now disabled by default. - This choice was made because there's krngd in the linux kernel space making it (for most usecases) - functionally redundent. - - - - - The hardware.nvidia.optimus_prime.enable service has been renamed to - hardware.nvidia.prime.sync.enable and has many new enhancements. - Related nvidia prime settings may have also changed. - - - - - The package nextcloud17 has been removed and nextcloud18 was marked as insecure - since both of them will - will be EOL (end of life) within the lifetime of 20.09. - - - It's necessary to upgrade to nextcloud19: - - - - From nextcloud17, you have to upgrade to nextcloud18 first as - Nextcloud doesn't allow going multiple major revisions forward in a single upgrade. This is possible - by setting to nextcloud18. - - - - - From nextcloud18, it's possible to directly upgrade to nextcloud19 - by setting to nextcloud19. - - - - - - - - The GNOME desktop manager no longer default installs gnome3.epiphany. - It was chosen to do this as it has a usability breaking issue (see issue #98819) - that makes it unsuitable to be a default app. - - - - Issue #98819 - is now fixed and gnome3.epiphany is once - again installed by default. - - - - - - If you want to manage the configuration of wpa_supplicant outside of NixOS you must ensure that none of , or is being used or true. - Using any of those options will cause wpa_supplicant to be started with a NixOS generated configuration file instead of your own. - - - -
- -
- Other Notable Changes - - - - SD images are now compressed by default using zstd. The compression for ISO images has also been changed to zstd, but ISO images are still not compressed by default. - - - - was updated from - 1000 to 10000 to follow the new - upstream systemd default. - - - - - The notmuch package move its emacs-related binaries and - emacs lisp files to a separate output. They're not part - of the default out output anymore - if you relied on the - notmuch-emacs-mua binary or the emacs lisp files, access them via - the notmuch.emacs output. - - Device tree overlay support was improved in - #79370 - and now uses - instead of . - - configuration was - extended to support .dts files with symbols. - - Device trees can now be filtered by setting - option. - - - - - The default output of buildGoPackage is now $out instead of $bin. - - - - - buildGoModule doCheck now defaults to true. - - - - - Packages built using buildRustPackage now use release - mode for the checkPhase by default. - - - Please note that Rust packages utilizing a custom build/install procedure - (e.g. by using a Makefile) or test suites that rely on the - structure of the target/ directory may break due to those assumptions. - For further information, please read the Rust section in the Nixpkgs manual. - - - - - The cc- and binutils-wrapper's "infix salt" and _BUILD_ and _TARGET_ user infixes have been replaced with with a "suffix salt" and suffixes and _FOR_BUILD and _FOR_TARGET. - This matches the autotools convention for env vars which standard for these things, making interfacing with other tools easier. - - - - - Additional Git documentation (HTML and text files) is now available via the git-doc package. - - - - - Default algorithm for ZRAM swap was changed to zstd. - - - - - The installer now enables sshd by default. This improves installation on headless machines especially ARM single-board-computer. - To login through ssh, either a password or an ssh key must be set for the root user or the nixos user. - - - - - The scripted networking system now uses .link files in - /etc/systemd/network to configure mac address and link MTU, - instead of the sometimes buggy network-link-* units, which - have been removed. - Bringing the interface up has been moved to the beginning of the - network-addresses-* unit. - Note this doesn't require systemd-networkd - it's udev that - parses .link files. - Extra care needs to be taken in the presence of legacy udev rules - to rename interfaces, as MAC Address and MTU defined in these options can only match on the original link name. - In such cases, you most likely want to create a 10-*.link file through and set both name and MAC Address / MTU there. - - - - - Grafana received a major update to version 7.x. A plugin is now needed for - image rendering support, and plugins must now be signed by default. More - information can be found - in the Grafana documentation. - - - - - The hardware.u2f module, which was installing udev rules - was removed, as udev gained native support to handle FIDO security tokens. - - - - - The services.transmission module - was enhanced with the new options: - , - , - and . - - - transmission-daemon is now started with additional systemd sandbox/hardening options for better security. - Please report - any use case where this is not working well. - In particular, the RootDirectory option newly set - forbids uploading or downloading a torrent outside of the default directory - configured at settings.download-dir. - If you really need Transmission to access other directories, - you must include those directories into the BindPaths of the service: - -systemd.services.transmission.serviceConfig.BindPaths = [ "/path/to/alternative/download-dir" ]; - - - - Also, connection to the RPC (Remote Procedure Call) of transmission-daemon - is now only available on the local network interface by default. - Use: - -services.transmission.settings.rpc-bind-address = "0.0.0.0"; - - to get the previous behavior of listening on all network interfaces. - - - - - With this release systemd-networkd (when enabled through ) - has it's netlink socket created through a systemd.socket unit. This gives us control over - socket buffer sizes and other parameters. For larger setups where networkd has to create a lot of (virtual) - devices the default buffer size (currently 128MB) is not enough. - - - On a machine with >100 virtual interfaces (e.g., wireguard tunnels, VLANs, …), that all have to - be brought up during system startup, the receive buffer size will spike for a brief period. - Eventually some of the message will be dropped since there is not enough (permitted) buffer - space available. - - - By having systemd-networkd start with a netlink socket created by - systemd we can configure the ReceiveBufferSize= parameter - in the socket options (i.e. systemd.sockets.systemd-networkd.socketOptions.ReceiveBufferSize) - without recompiling systemd-networkd. - - - Since the actual memory requirements depend on hardware, timing, exact - configurations etc. it isn't currently possible to infer a good default - from within the NixOS module system. Administrators are advised to - monitor the logs of systemd-networkd for rtnl: kernel receive buffer - overrun spam and increase the memory limit as they see fit. - - - Note: Increasing the ReceiveBufferSize= doesn't allocate any memory. It just increases - the upper bound on the kernel side. The memory allocation depends on the amount of messages that are - queued on the kernel side of the netlink socket. - - - - - Specifying mailboxes in the dovecot2 module - as a list is deprecated and will break eval in 21.05. Instead, an attribute-set should be specified where the name - should be the key of the attribute. - - - This means that a configuration like this -{ - services.dovecot2.mailboxes = [ - { name = "Junk"; - auto = "create"; - } - ]; -} - should now look like this: -{ - services.dovecot2.mailboxes = { - Junk.auto = "create"; - }; -} - - - - - netbeans was upgraded to 12.0 and now defaults to OpenJDK 11. This might cause problems if your projects depend on packages that were removed in Java 11. - - - - - nextcloud has been updated to v19. - - - If you have an existing installation, please make sure that you're on - nextcloud18 before upgrading to nextcloud19 - since Nextcloud doesn't support upgrades across multiple major versions. - - - - - The nixos-run-vms script now deletes the - previous run machines states on test startup. You can use the - --keep-vm-state flag to match the previous - behaviour and keep the same VM state between different test runs. - - - - - The nix.buildMachines option is now type-checked. - There are no functional changes, however this may require updating some configurations to use correct types for all attributes. - - - - - The fontconfig module stopped generating config and cache files for fontconfig 2.10.x, the /etc/fonts/fonts.conf now belongs to the latest fontconfig, just like on other Linux distributions, and we will no longer be versioning the config directories. - - - Fontconfig 2.10.x was removed from Nixpkgs since it hasn’t been used in any Nixpkgs package for years now. - - - - - Nginx module nginxModules.fastcgi-cache-purge renamed to official name nginxModules.cache-purge. - Nginx module nginxModules.ngx_aws_auth renamed to official name nginxModules.aws-auth. - - - - - The option was added. It installs the packages perl, rsync and strace for now. They were added unconditionally to before, but are not strictly necessary for a minimal NixOS install. You can set it to an empty list to have a more minimal system. Be aware that some functionality might still have an impure dependency on those packages, so things might break. - - - - - The undervolt option no longer needs to apply its - settings every 30s. If they still become undone, open an issue and restore - the previous behaviour using undervolt.useTimer. - - - - - Agda has been heavily reworked. - - - - agda.mkDerivation has been heavily changed and - is now located at agdaPackages.mkDerivation. - - - - - New top-level packages agda and - agda.withPackages have been added, the second - of which sets up agda with access to chosen libraries. - - - - - All agda libraries now live under - agdaPackages. - - - - - Many broken libraries have been removed. - - - - See the new - documentation for more information. - - - - - The deepin package set has been removed from - nixpkgs. It was a work in progress to package the - Deepin Desktop Environment (DDE), - including libraries, tools and applications, and it was still - missing a service to launch the desktop environment. It has shown - to no longer be a feasible goal due to reasons discussed in - issue #94870. - The package netease-cloud-music has also been - removed, as it depends on libraries from deepin. - - - - - The opendkim module now uses systemd sandboxing features - to limit the exposure of the system towards the opendkim service. - - - - - - - - Kubernetes has been upgraded to 1.19.1, which also means that the - golang version to build it has been bumped to 1.15. This may have - consequences for your existing clusters and their certificates. Please - consider - - the release notes for Kubernetes 1.19 carefully - - before upgrading. - - - - - - - For AMD GPUs, Vulkan can now be used by adding amdvlk - to hardware.opengl.extraPackages. - - - - - Similarly, still for AMD GPUs, the ROCm OpenCL stack can now be used by adding - rocm-opencl-icd to - hardware.opengl.extraPackages. - - - -
- -
- Contributions - - I, Jonathan Ringer, would like to thank the following individuals for their work on nixpkgs. This release could not be done without the hard work of the NixOS community. There were 31282 contributions across 1313 contributors. - - - - Top contributors to NixOS/Nixpkgs from the 20.03 release to the 20.09 release: - - - - 2288 Mario Rodas - - - - - 1837 Frederik Rietdijk - - - - - 946 Jörg Thalheim - - - - - 925 Maximilian Bosch - - - - - 687 Jonathan Ringer - - - - - 651 Jan Tojnar - - - - - 622 Daniël de Kok - - - - - 605 WORLDofPEACE - - - - - 597 Florian Klink - - - - - 528 José Romildo Malaquias - - - - - - - Top contributors to stabilizing this release (Zero Hydra Failures period): - - - - 281 volth - - - - - 101 Robert Scott - - - - - 86 Tim Steinbach - - - - - 76 WORLDofPEACE - - - - - 49 Maximilian Bosch - - - - - 42 Thomas Tuegel - - - - - 37 Doron Behar - - - - - 36 Vladimír Čunát - - - - - 27 Jonathan Ringer - - - - - 27 Maciej Krüger - - - - - - I, Jonathan Ringer, would also like to personally thank @WORLDofPEACE for their help in mentoring me on the release process. Special thanks also goes to Thomas Tuegel for helping immensely with stabilizing Qt, KDE, and Plasma5; I would also like to thank Robert Scott for his numerous fixes and pull request reviews. - - -
-
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2105.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2105.section.md new file mode 100644 index 0000000000..e4565b8ca6 --- /dev/null +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2105.section.md @@ -0,0 +1,428 @@ +# Release 21.05 ("Okapi", 2021.05/31) {#sec-release-21.05} + +Support is planned until the end of December 2021, handing over to 21.11. + +## Highlights {#sec-release-21.05-highlights} + +In addition to numerous new and upgraded packages, this release has the following highlights: + +- Core version changes: + + - gcc: 9.3.0 -\> 10.3.0 + + - glibc: 2.30 -\> 2.32 + + - default linux: 5.4 -\> 5.10, all supported kernels available + + - mesa: 20.1.7 -\> 21.0.1 + +- Desktop Environments: + + - GNOME: 3.36 -\> 40, see its [release notes](https://help.gnome.org/misc/release-notes/40.0/) + + - Plasma5: 5.18.5 -\> 5.21.3 + + - kdeApplications: 20.08.1 -\> 20.12.3 + + - cinnamon: 4.6 -\> 4.8.1 + +- Programming Languages and Frameworks: + + - Python optimizations were disabled again. Builds with optimizations enabled are not reproducible. Optimizations can now be enabled with an option. + +- The linux_latest kernel was updated to the 5.12 series. It currently is not officially supported for use with the zfs filesystem. If you use zfs, you should use a different kernel version (either the LTS kernel, or track a specific one). + +## New Services {#sec-release-21.05-new-services} + +The following new services were added since the last release: + +- [GNURadio](https://www.gnuradio.org/) 3.8 was [finally](https://github.com/NixOS/nixpkgs/issues/82263) packaged, along with a rewrite to the Nix expressions, allowing users to override the features upstream supports selecting to compile or not to. Additionally, the attribute `gnuradio` and `gnuradio3_7` now point to an externally wrapped by default derivations, that allow you to also add \`extraPythonPackages\` to the Python interpreter used by GNURadio. Missing environmental variables needed for operational GUI were also added ([\#75478](https://github.com/NixOS/nixpkgs/issues/75478)). + +- [Keycloak](https://www.keycloak.org/), an open source identity and access management server with support for [OpenID Connect](https://openid.net/connect/), [OAUTH 2.0](https://oauth.net/2/) and [SAML 2.0](https://en.wikipedia.org/wiki/SAML_2.0). + + See the [Keycloak section of the NixOS manual](#module-services-keycloak) for more information. + +- [services.samba-wsdd.enable](options.html#opt-services.samba-wsdd.enable) Web Services Dynamic Discovery host daemon + +- [Discourse](https://www.discourse.org/), a modern and open source discussion platform. + + See the [Discourse section of the NixOS manual](#module-services-discourse) for more information. + +- [services.nebula.networks](options.html#opt-services.nebula.networks) [Nebula VPN](https://github.com/slackhq/nebula) + +## Backward Incompatibilities {#sec-release-21.05-incompatibilities} + +When upgrading from a previous release, please be aware of the following incompatible changes: + +- GNOME desktop environment was upgraded to 40, see the release notes for [40.0](https://help.gnome.org/misc/release-notes/40.0/) and [3.38](https://help.gnome.org/misc/release-notes/3.38/). The `gnome3` attribute set has been renamed to `gnome` and so have been the NixOS options. + +- If you are using `services.udev.extraRules` to assign custom names to network interfaces, this may stop working due to a change in the initialisation of dhcpcd and systemd networkd. To avoid this, either move them to `services.udev.initrdRules` or see the new [Assigning custom names](#sec-custom-ifnames) section of the NixOS manual for an example using networkd links. + +- The `security.hideProcessInformation` module has been removed. It was broken since the switch to cgroups-v2. + +- The `linuxPackages.ati_drivers_x11` kernel modules have been removed. The drivers only supported kernels prior to 4.2, and thus have become obsolete. + +- The `systemConfig` kernel parameter is no longer added to boot loader entries. It has been unused since September 2010, but if do have a system generation from that era, you will now be unable to boot into them. + +- `systemd-journal2gelf` no longer parses json and expects the receiving system to handle it. How to achieve this with Graylog is described in this [GitHub issue](https://github.com/parse-nl/SystemdJournal2Gelf/issues/10). + +- If the `services.dbus` module is enabled, then the user D-Bus session is now always socket activated. The associated options `services.dbus.socketActivated` and `services.xserver.startDbusSession` have therefore been removed and you will receive a warning if they are present in your configuration. This change makes the user D-Bus session available also for non-graphical logins. + +- The `networking.wireless.iwd` module now installs the upstream-provided 80-iwd.link file, which sets the NamePolicy= for all wlan devices to \"keep kernel\", to avoid race conditions between iwd and networkd. If you don\'t want this, you can set `systemd.network.links."80-iwd" = lib.mkForce {}`. + +- `rubyMinimal` was removed due to being unused and unusable. The default ruby interpreter includes JIT support, which makes it reference it\'s compiler. Since JIT support is probably needed by some Gems, it was decided to enable this feature with all cc references by default, and allow to build a Ruby derivation without references to cc, by setting `jitSupport = false;` in an overlay. See [\#90151](https://github.com/NixOS/nixpkgs/pull/90151) for more info. + +- Setting `services.openssh.authorizedKeysFiles` now also affects which keys `security.pam.enableSSHAgentAuth` will use. WARNING: If you are using these options in combination do make sure that any key paths you use are present in `services.openssh.authorizedKeysFiles`! + +- The option `fonts.enableFontDir` has been renamed to [fonts.fontDir.enable](options.html#opt-fonts.fontDir.enable). The path of font directory has also been changed to `/run/current-system/sw/share/X11/fonts`, for consistency with other X11 resources. + +- A number of options have been renamed in the kicad interface. `oceSupport` has been renamed to `withOCE`, `withOCCT` has been renamed to `withOCC`, `ngspiceSupport` has been renamed to `withNgspice`, and `scriptingSupport` has been renamed to `withScripting`. Additionally, `kicad/base.nix` no longer provides default argument values since these are provided by `kicad/default.nix`. + +- The socket for the `pdns-recursor` module was moved from `/var/lib/pdns-recursor` to `/run/pdns-recursor` to match upstream. + +- Paperwork was updated to version 2. The on-disk format slightly changed, and it is not possible to downgrade from Paperwork 2 back to Paperwork 1.3. Back your documents up before upgrading. See [this thread](https://forum.openpaper.work/t/paperwork-2-0/112/5) for more details. + +- PowerDNS has been updated from `4.2.x` to `4.3.x`. Please be sure to review the [Upgrade Notes](https://doc.powerdns.com/authoritative/upgrading.html#x-to-4-3-0) provided by upstream before upgrading. Worth specifically noting is that the service now runs entirely as a dedicated `pdns` user, instead of starting as `root` and dropping privileges, as well as the default `socket-dir` location changing from `/var/lib/powerdns` to `/run/pdns`. + +- The `mediatomb` service is now using by default the new and maintained fork `gerbera` package instead of the unmaintained `mediatomb` package. If you want to keep the old behavior, you must declare it with: + + ```nix + { + services.mediatomb.package = pkgs.mediatomb; + } + ``` + + One new option `openFirewall` has been introduced which defaults to false. If you relied on the service declaration to add the firewall rules itself before, you should now declare it with: + + ```nix + { + services.mediatomb.openFirewall = true; + } + ``` + +- xfsprogs was update from 4.19 to 5.11. It now enables reflink support by default on filesystem creation. Support for reflinks was added with an experimental status to kernel 4.9 and deemed stable in kernel 4.16. If you want to be able to mount XFS filesystems created with this release of xfsprogs on kernel releases older than those, you need to format them with `mkfs.xfs -m reflink=0`. + +- The uWSGI server is now built with POSIX capabilities. As a consequence, root is no longer required in emperor mode and the service defaults to running as the unprivileged `uwsgi` user. Any additional capability can be added via the new option [services.uwsgi.capabilities](options.html#opt-services.uwsgi.capabilities). The previous behaviour can be restored by setting: + + ```nix + { + services.uwsgi.user = "root"; + services.uwsgi.group = "root"; + services.uwsgi.instance = + { + uid = "uwsgi"; + gid = "uwsgi"; + }; + } + ``` + + Another incompatibility from the previous release is that vassals running under a different user or group need to use `immediate-{uid,gid}` instead of the usual `uid,gid` options. + +- btc1 has been abandoned upstream, and removed. + +- cpp_ethereum (aleth) has been abandoned upstream, and removed. + +- riak-cs package removed along with `services.riak-cs` module. + +- stanchion package removed along with `services.stanchion` module. + +- mutt has been updated to a new major version (2.x), which comes with some backward incompatible changes that are described in the [release notes for Mutt 2.0](http://www.mutt.org/relnotes/2.0/). + +- `vim` and `neovim` switched to Python 3, dropping all Python 2 support. + +- [networking.wireguard.interfaces.\.generatePrivateKeyFile](options.html#opt-networking.wireguard.interfaces), which is off by default, had a `chmod` race condition fixed. As an aside, the parent directory\'s permissions were widened, and the key files were made owner-writable. This only affects newly created keys. However, if the exact permissions are important for your setup, read [\#121294](https://github.com/NixOS/nixpkgs/pull/121294). + +- [boot.zfs.forceImportAll](options.html#opt-boot.zfs.forceImportAll) previously did nothing, but has been fixed. However its default has been changed to `false` to preserve the existing default behaviour. If you have this explicitly set to `true`, please note that your non-root pools will now be forcibly imported. + +- openafs now points to openafs_1_8, which is the new stable release. OpenAFS 1.6 was removed. + +- The WireGuard module gained a new option `networking.wireguard.interfaces..peers.*.dynamicEndpointRefreshSeconds` that implements refreshing the IP of DNS-based endpoints periodically (which WireGuard itself [cannot do](https://lists.zx2c4.com/pipermail/wireguard/2017-November/002028.html)). + +- MariaDB has been updated to 10.5. Before you upgrade, it would be best to take a backup of your database and read [ Incompatible Changes Between 10.4 and 10.5](https://mariadb.com/kb/en/upgrading-from-mariadb-104-to-mariadb-105/#incompatible-changes-between-104-and-105). After the upgrade you will need to run `mysql_upgrade`. + +- The TokuDB storage engine dropped in mariadb 10.5 and removed in mariadb 10.6. It is recommended to switch to RocksDB. See also [TokuDB](https://mariadb.com/kb/en/tokudb/) and [MDEV-19780: Remove the TokuDB storage engine](https://jira.mariadb.org/browse/MDEV-19780). + +- The `openldap` module now has support for OLC-style configuration, users of the `configDir` option may wish to migrate. If you continue to use `configDir`, ensure that `olcPidFile` is set to `/run/slapd/slapd.pid`. + + As a result, `extraConfig` and `extraDatabaseConfig` are removed. To help with migration, you can convert your `slapd.conf` file to OLC configuration with the following script (find the location of this configuration file by running `systemctl status openldap`, it is the `-f` option. + + ```ShellSession + $ TMPDIR=$(mktemp -d) + $ slaptest -f /path/to/slapd.conf -F $TMPDIR + $ slapcat -F $TMPDIR -n0 -H 'ldap:///???(!(objectClass=olcSchemaConfig))' + ``` + + This will dump your current configuration in LDIF format, which should be straightforward to convert into Nix settings. This does not show your schema configuration, as this is unnecessarily verbose for users of the default schemas and `slaptest` is buggy with schemas directly in the config file. + +- Amazon EC2 and OpenStack Compute (nova) images now re-fetch instance meta data and user data from the instance metadata service (IMDS) on each boot. For example: stopping an EC2 instance, changing its user data, and restarting the instance will now cause it to fetch and apply the new user data. + + ::: {.warning} + Specifically, `/etc/ec2-metadata` is re-populated on each boot. Some NixOS scripts that read from this directory are guarded to only run if the files they want to manipulate do not already exist, and so will not re-apply their changes if the IMDS response changes. Examples: `root`\'s SSH key is only added if `/root/.ssh/authorized_keys` does not exist, and SSH host keys are only set from user data if they do not exist in `/etc/ssh`. + ::: + +- The `rspamd` services is now sandboxed. It is run as a dynamic user instead of root, so secrets and other files may have to be moved or their permissions may have to be fixed. The sockets are now located in `/run/rspamd` instead of `/run`. + +- Enabling the Tor client no longer silently also enables and configures Privoxy, and the `services.tor.client.privoxy.enable` option has been removed. To enable Privoxy, and to configure it to use Tor\'s faster port, use the following configuration: + + ```nix + { + opt-services.privoxy.enable = true; + opt-services.privoxy.enableTor = true; + } + ``` + +- The `services.tor` module has a new exhaustively typed [services.tor.settings](options.html#opt-services.tor.settings) option following RFC 0042; backward compatibility with old options has been preserved when aliasing was possible. The corresponding systemd service has been hardened, but there is a chance that the service still requires more permissions, so please report any related trouble on the bugtracker. Onion services v3 are now supported in [services.tor.relay.onionServices](options.html#opt-services.tor.relay.onionServices). A new [services.tor.openFirewall](options.html#opt-services.tor.openFirewall) option as been introduced for allowing connections on all the TCP ports configured. + +- The options `services.slurm.dbdserver.storagePass` and `services.slurm.dbdserver.configFile` have been removed. Use `services.slurm.dbdserver.storagePassFile` instead to provide the database password. Extra config options can be given via the option `services.slurm.dbdserver.extraConfig`. The actual configuration file is created on the fly on startup of the service. This avoids that the password gets exposed in the nix store. + +- The `wafHook` hook does not wrap Python anymore. Packages depending on `wafHook` need to include any Python into their `nativeBuildInputs`. + +- Starting with version 1.7.0, the project formerly named `CodiMD` is now named `HedgeDoc`. New installations will no longer use the old name for users, state directories and such, this needs to be considered when moving state to a more recent NixOS installation. Based on [system.stateVersion](options.html#opt-system.stateVersion), existing installations will continue to work. + +- The fish-foreign-env package has been replaced with fishPlugins.foreign-env, in which the fish functions have been relocated to the `vendor_functions.d` directory to be loaded automatically. + +- The prometheus json exporter is now managed by the prometheus community. Together with additional features some backwards incompatibilities were introduced. Most importantly the exporter no longer accepts a fixed command-line parameter to specify the URL of the endpoint serving JSON. It now expects this URL to be passed as an URL parameter, when scraping the exporter\'s `/probe` endpoint. In the prometheus scrape configuration the scrape target might look like this: + + ``` + http://some.json-exporter.host:7979/probe?target=https://example.com/some/json/endpoint + ``` + + Existing configuration for the exporter needs to be updated, but can partially be re-used. Documentation is available in the upstream repository and a small example for NixOS is available in the corresponding NixOS test. + + These changes also affect [services.prometheus.exporters.rspamd.enable](options.html#opt-services.prometheus.exporters.rspamd.enable), which is just a preconfigured instance of the json exporter. + + For more information, take a look at the [ official documentation](https://github.com/prometheus-community/json_exporter) of the json_exporter. + +- Androidenv was updated, removing the `includeDocs` and `lldbVersions` arguments. Docs only covered a single version of the Android SDK, LLDB is now bundled with the NDK, and both are no longer available to download from the Android package repositories. Additionally, since the package lists have been updated, some older versions of Android packages may not be bundled. If you depend on older versions of Android packages, we recommend overriding the repo. + + Android packages are now loaded from a repo.json file created by parsing Android repo XML files. The arguments `repoJson` and `repoXmls` have been added to allow overriding the built-in androidenv repo.json with your own. Additionally, license files are now written to allow compatibility with Gradle-based tools, and the `extraLicenses` argument has been added to accept more SDK licenses if your project requires it. See the androidenv documentation for more details. + +- The attribute `mpi` is now consistently used to provide a default, system-wide MPI implementation. The default implementation is openmpi, which has been used before by all derivations affects by this change. Note that all packages that have used `mpi ? null` in the input for optional MPI builds, have been changed to the boolean input paramater `useMpi` to enable building with MPI. Building all packages with `mpich` instead of the default `openmpi` can now be achived like this: + + ```nix + self: super: + { + mpi = super.mpich; + } + ``` + +- The Searx module has been updated with the ability to configure the service declaratively and uWSGI integration. The option `services.searx.configFile` has been renamed to [services.searx.settingsFile](options.html#opt-services.searx.settingsFile) for consistency with the new [services.searx.settings](options.html#opt-services.searx.settings). In addition, the `searx` uid and gid reservations have been removed since they were not necessary: the service is now running with a dynamically allocated uid. + +- The libinput module has been updated with the ability to configure mouse and touchpad settings separately. The options in `services.xserver.libinput` have been renamed to `services.xserver.libinput.touchpad`, while there is a new `services.xserver.libinput.mouse` for mouse related configuration. + + Since touchpad options no longer apply to all devices, you may want to replicate your touchpad configuration in mouse section. + +- ALSA OSS emulation (`sound.enableOSSEmulation`) is now disabled by default. + +- Thinkfan as been updated to `1.2.x`, which comes with a new YAML based configuration format. For this reason, several NixOS options of the thinkfan module have been changed to non-backward compatible types. In addition, a new [services.thinkfan.settings](options.html#opt-services.thinkfan.settings) option has been added. + + Please read the [ thinkfan documentation](https://github.com/vmatare/thinkfan#readme) before updating. + +- Adobe Flash Player support has been dropped from the tree. In particular, the following packages no longer support it: + + - chromium + + - firefox + + - qt48 + + - qt5.qtwebkit + + Additionally, packages flashplayer and hal-flash were removed along with the `services.flashpolicyd` module. + +- The `security.rngd` module has been removed. It was disabled by default in 20.09 as it was functionally redundant with krngd in the linux kernel. It is not necessary for any device that the kernel recognises as an hardware RNG, as it will automatically run the krngd task to periodically collect random data from the device and mix it into the kernel\'s RNG. + + The default SMTP port for GitLab has been changed to `25` from its previous default of `465`. If you depended on this default, you should now set the [services.gitlab.smtp.port](options.html#opt-services.gitlab.smtp.port) option. + +- The default version of ImageMagick has been updated from 6 to 7. You can use imagemagick6, imagemagick6_light, and imagemagick6Big if you need the older version. + +- [services.xserver.videoDrivers](options.html#opt-services.xserver.videoDrivers) no longer uses the deprecated `cirrus` and `vesa` device dependent X drivers by default. It also enables both `amdgpu` and `nouveau` drivers by default now. + +- The `kindlegen` package is gone, because it is no longer supported or hosted by Amazon. Sadly, its replacement, Kindle Previewer, has no Linux support. However, there are other ways to generate MOBI files. See [the discussion](https://github.com/NixOS/nixpkgs/issues/96439) for more info. + +- The apacheKafka packages are now built with version-matched JREs. Versions 2.6 and above, the ones that recommend it, use jdk11, while versions below remain on jdk8. The NixOS service has been adjusted to start the service using the same version as the package, adjustable with the new [services.apache-kafka.jre](options.html#opt-services.apache-kafka.jre) option. Furthermore, the default list of [services.apache-kafka.jvmOptions](options.html#opt-services.apache-kafka.jvmOptions) have been removed. You should set your own according to the [upstream documentation](https://kafka.apache.org/documentation/#java) for your Kafka version. + +- The kodi package has been modified to allow concise addon management. Consider the following configuration from previous releases of NixOS to install kodi, including the kodiPackages.inputstream-adaptive and kodiPackages.vfs-sftp addons: + + ```nix + { + environment.systemPackages = [ + pkgs.kodi + ]; + + nixpkgs.config.kodi = { + enableInputStreamAdaptive = true; + enableVFSSFTP = true; + }; + } + ``` + + All Kodi `config` flags have been removed, and as a result the above configuration should now be written as: + + ```nix + { + environment.systemPackages = [ + (pkgs.kodi.withPackages (p: with p; [ + inputstream-adaptive + vfs-sftp + ])) + ]; + } + ``` + +- `environment.defaultPackages` now includes the nano package. If pkgs.nano is not added to the list, make sure another editor is installed and the `EDITOR` environment variable is set to it. Environment variables can be set using `environment.variables`. + +- `services.minio.dataDir` changed type to a list of paths, required for specifiyng multiple data directories for using with erasure coding. Currently, the service doesn\'t enforce nor checks the correct number of paths to correspond to minio requirements. + +- All CUDA toolkit versions prior to CUDA 10 have been removed. + +- The kbdKeymaps package was removed since dvp and neo are now included in kbd. If you want to use the Programmer Dvorak Keyboard Layout, you have to use `dvorak-programmer` in `console.keyMap` now instead of `dvp`. In `services.xserver.xkbVariant` it\'s still `dvp`. + +- The babeld service is now being run as an unprivileged user. To achieve that the module configures `skip-kernel-setup true` and takes care of setting forwarding and rp_filter sysctls by itself as well as for each interface in `services.babeld.interfaces`. + +- The `services.zigbee2mqtt.config` option has been renamed to `services.zigbee2mqtt.settings` and now follows [RFC 0042](https://github.com/NixOS/rfcs/blob/master/rfcs/0042-config-option.md). + + The yadm dotfile manager has been updated from 2.x to 3.x, which has new (XDG) default locations for some data/state files. Most yadm commands will fail and print a legacy path warning (which describes how to upgrade/migrate your repository). If you have scripts, daemons, scheduled jobs, shell profiles, etc. that invoke yadm, expect them to fail or misbehave until you perform this migration and prepare accordingly. + +- Instead of determining `services.radicale.package` automatically based on `system.stateVersion`, the latest version is always used because old versions are not officially supported. + + Furthermore, Radicale\'s systemd unit was hardened which might break some deployments. In particular, a non-default `filesystem_folder` has to be added to `systemd.services.radicale.serviceConfig.ReadWritePaths` if the deprecated `services.radicale.config` is used. + +- In the `security.acme` module, use of `--reuse-key` parameter for Lego has been removed. It was introduced for HKPK, but this security feature is now deprecated. It is a better security practice to rotate key pairs instead of always keeping the same. If you need to keep this parameter, you can add it back using `extraLegoRenewFlags` as an option for the appropriate certificate. + +## Other Notable Changes {#sec-release-21.05-notable-changes} + +- `stdenv.lib` has been deprecated and will break eval in 21.11. Please use `pkgs.lib` instead. See [\#108938](https://github.com/NixOS/nixpkgs/issues/108938) for details. + +- [GNURadio](https://www.gnuradio.org/) has a `pkgs` attribute set, and there\'s a `gnuradio.callPackage` function that extends `pkgs` with a `mkDerivation`, and a `mkDerivationWith`, like Qt5. Now all `gnuradio.pkgs` are defined with `gnuradio.callPackage` and some packages that depend on gnuradio are defined with this as well. + +- [Privoxy](https://www.privoxy.org/) has been updated to version 3.0.32 (See [announcement](https://lists.privoxy.org/pipermail/privoxy-announce/2021-February/000007.html)). Compared to the previous release, Privoxy has gained support for HTTPS inspection (still experimental), Brotli decompression, several new filters and lots of bug fixes, including security ones. In addition, the package is now built with compression and external filters support, which were previously disabled. + + Regarding the NixOS module, new options for HTTPS inspection have been added and `services.privoxy.extraConfig` has been replaced by the new [services.privoxy.settings](options.html#opt-services.privoxy.settings) (See [RFC 0042](https://github.com/NixOS/rfcs/blob/master/rfcs/0042-config-option.md) for the motivation). + +- [Kodi](https://kodi.tv/) has been updated to version 19.1 \"Matrix\". See the [announcement](https://kodi.tv/article/kodi-190-matrix-release) for further details. + +- The `services.packagekit.backend` option has been removed as it only supported a single setting which would always be the default. Instead new [RFC 0042](https://github.com/NixOS/rfcs/blob/master/rfcs/0042-config-option.md) compliant [services.packagekit.settings](options.html#opt-services.packagekit.settings) and [services.packagekit.vendorSettings](options.html#opt-services.packagekit.vendorSettings) options have been introduced. + +- [Nginx](https://nginx.org) has been updated to stable version 1.20.0. Now nginx uses the zlib-ng library by default. + +- KDE Gear (formerly KDE Applications) is upgraded to 21.04, see its [release notes](https://kde.org/announcements/gear/21.04/) for details. + + The `kdeApplications` package set is now `kdeGear`, in keeping with the new name. The old name remains for compatibility, but it is deprecated. + +- [Libreswan](https://libreswan.org/) has been updated to version 4.4. The package now includes example configurations and manual pages by default. The NixOS module has been changed to use the upstream systemd units and write the configuration in the `/etc/ipsec.d/ ` directory. In addition, two new options have been added to specify connection policies ([services.libreswan.policies](options.html#opt-services.libreswan.policies)) and disable send/receive redirects ([services.libreswan.disableRedirects](options.html#opt-services.libreswan.disableRedirects)). + +- The Mailman NixOS module (`services.mailman`) has a new option [services.mailman.enablePostfix](options.html#opt-services.mailman.enablePostfix), defaulting to true, that controls integration with Postfix. + + If this option is disabled, default MTA config becomes not set and you should set the options in `services.mailman.settings.mta` according to the desired configuration as described in [Mailman documentation](https://mailman.readthedocs.io/en/latest/src/mailman/docs/mta.html). + +- The default-version of `nextcloud` is nextcloud21. Please note that it\'s _not_ possible to upgrade `nextcloud` across multiple major versions! This means that it\'s e.g. not possible to upgrade from nextcloud18 to nextcloud20 in a single deploy and most `20.09` users will have to upgrade to nextcloud20 first. + + The package can be manually upgraded by setting [services.nextcloud.package](options.html#opt-services.nextcloud.package) to nextcloud21. + +- The setting [services.redis.bind](options.html#opt-services.redis.bind) defaults to `127.0.0.1` now, making Redis listen on the loopback interface only, and not all public network interfaces. + +- NixOS now emits a deprecation warning if systemd\'s `StartLimitInterval` setting is used in a `serviceConfig` section instead of in a `unitConfig`; that setting is deprecated and now undocumented for the service section by systemd upstream, but still effective and somewhat buggy there, which can be confusing. See [\#45785](https://github.com/NixOS/nixpkgs/issues/45785) for details. + + All services should use [systemd.services._name_.startLimitIntervalSec](options.html#opt-systemd.services._name_.startLimitIntervalSec) or `StartLimitIntervalSec` in [systemd.services._name_.unitConfig](options.html#opt-systemd.services._name_.unitConfig) instead. + +- The `mediatomb` service declares new options. It also adapts existing options so the configuration generation is now lazy. The existing option `customCfg` (defaults to false), when enabled, stops the service configuration generation completely. It then expects the users to provide their own correct configuration at the right location (whereas the configuration was generated and not used at all before). The new option `transcodingOption` (defaults to no) allows a generated configuration. It makes the mediatomb service pulls the necessary runtime dependencies in the nix store (whereas it was generated with hardcoded values before). The new option `mediaDirectories` allows the users to declare autoscan media directories from their nixos configuration: + + ```nix + { + services.mediatomb.mediaDirectories = [ + { path = "/var/lib/mediatomb/pictures"; recursive = false; hidden-files = false; } + { path = "/var/lib/mediatomb/audio"; recursive = true; hidden-files = false; } + ]; + } + ``` + +- The Unbound DNS resolver service (`services.unbound`) has been refactored to allow reloading, control sockets and to fix startup ordering issues. + + It is now possible to enable a local UNIX control socket for unbound by setting the [services.unbound.localControlSocketPath](options.html#opt-services.unbound.localControlSocketPath) option. + + Previously we just applied a very minimal set of restrictions and trusted unbound to properly drop root privs and capabilities. + + As of this we are (for the most part) just using the upstream example unit file for unbound. The main difference is that we start unbound as `unbound` user with the required capabilities instead of letting unbound do the chroot & uid/gid changes. + + The upstream unit configuration this is based on is a lot stricter with all kinds of permissions then our previous variant. It also came with the default of having the `Type` set to `notify`, therefore we are now also using the `unbound-with-systemd` package here. Unbound will start up, read the configuration files and start listening on the configured ports before systemd will declare the unit `active (running)`. This will likely help with startup order and the occasional race condition during system activation where the DNS service is started but not yet ready to answer queries. Services depending on `nss-lookup.target` or `unbound.service` are now be able to use unbound when those targets have been reached. + + Additionally to the much stricter runtime environment the `/dev/urandom` mount lines we previously had in the code (that randomly failed during the stop-phase) have been removed as systemd will take care of those for us. + + The `preStart` script is now only required if we enabled the trust anchor updates (which are still enabled by default). + + Another benefit of the refactoring is that we can now issue reloads via either `pkill -HUP unbound` and `systemctl reload unbound` to reload the running configuration without taking the daemon offline. A prerequisite of this was that unbound configuration is available on a well known path on the file system. We are using the path `/etc/unbound/unbound.conf` as that is the default in the CLI tooling which in turn enables us to use `unbound-control` without passing a custom configuration location. + + The module has also been reworked to be [RFC 0042](https://github.com/NixOS/rfcs/blob/master/rfcs/0042-config-option.md) compliant. As such, `sevices.unbound.extraConfig` has been removed and replaced by [services.unbound.settings](options.html#opt-services.unbound.settings). `services.unbound.interfaces` has been renamed to `services.unbound.settings.server.interface`. + + `services.unbound.forwardAddresses` and `services.unbound.allowedAccess` have also been changed to use the new settings interface. You can follow the instructions when executing `nixos-rebuild` to upgrade your configuration to use the new interface. + +- The `services.dnscrypt-proxy2` module now takes the upstream\'s example configuration and updates it with the user\'s settings. An option has been added to restore the old behaviour if you prefer to declare the configuration from scratch. + +- NixOS now defaults to the unified cgroup hierarchy (cgroupsv2). See the [Fedora Article for 31](https://www.redhat.com/sysadmin/fedora-31-control-group-v2) for details on why this is desirable, and how it impacts containers. + + If you want to run containers with a runtime that does not yet support cgroupsv2, you can switch back to the old behaviour by setting [systemd.enableUnifiedCgroupHierarchy](options.html#opt-systemd.enableUnifiedCgroupHierarchy) = `false`; and rebooting. + +- PulseAudio was upgraded to 14.0, with changes to the handling of default sinks. See its [release notes](https://www.freedesktop.org/wiki/Software/PulseAudio/Notes/14.0/). + +- GNOME users may wish to delete their `~/.config/pulse` due to the changes to stream routing logic. See [PulseAudio bug 832](https://gitlab.freedesktop.org/pulseaudio/pulseaudio/-/issues/832) for more information. + +- The zookeeper package does not provide `zooInspector.sh` anymore, as that \"contrib\" has been dropped from upstream releases. + +- In the ACME module, the data used to build the hash for the account directory has changed to accomodate new features to reduce account rate limit issues. This will trigger new account creation on the first rebuild following this update. No issues are expected to arise from this, thanks to the new account creation handling. + +- [users.users._name_.createHome](options.html#opt-users.users._name_.createHome) now always ensures home directory permissions to be `0700`. Permissions had previously been ignored for already existing home directories, possibly leaving them readable by others. The option\'s description was incorrect regarding ownership management and has been simplified greatly. + +- When defining a new user, one of [users.users._name_.isNormalUser](options.html#opt-users.users._name_.isNormalUser) and [users.users._name_.isSystemUser](options.html#opt-users.users._name_.isSystemUser) is now required. This is to prevent accidentally giving a UID above 1000 to system users, which could have unexpected consequences, like running user activation scripts for system users. Note that users defined with an explicit UID below 500 are exempted from this check, as [users.users._name_.isSystemUser](options.html#opt-users.users._name_.isSystemUser) has no effect for those. + +- The `security.apparmor` module, for the [AppArmor](https://gitlab.com/apparmor/apparmor/-/wikis/Documentation) Mandatory Access Control system, has been substantialy improved along with related tools, so that module maintainers can now more easily write AppArmor profiles for NixOS. The most notable change on the user-side is the new option [security.apparmor.policies](options.html#opt-security.apparmor.policies), replacing the previous `profiles` option to provide a way to disable a profile and to select whether to confine in enforce mode (default) or in complain mode (see `journalctl -b --grep apparmor`). Security-minded users may also want to enable [security.apparmor.killUnconfinedConfinables](options.html#opt-security.apparmor.killUnconfinedConfinables), at the cost of having some of their processes killed when updating to a NixOS version introducing new AppArmor profiles. + +- The GNOME desktop manager once again installs gnome.epiphany by default. + +- NixOS now generates empty `/etc/netgroup`. `/etc/netgroup` defines network-wide groups and may affect to setups using NIS. + +- Platforms, like `stdenv.hostPlatform`, no longer have a `platform` attribute. It has been (mostly) flattened away: + + - `platform.gcc` is now `gcc` + + - `platform.kernel*` is now `linux-kernel.*` + + Additionally, `platform.kernelArch` moved to the top level as `linuxArch` to match the other `*Arch` variables. + + The `platform` grouping of these things never meant anything, and was just a historial/implementation artifact that was overdue removal. + +- `services.restic` now uses a dedicated cache directory for every backup defined in `services.restic.backups`. The old global cache directory, `/root/.cache/restic`, is now unused and can be removed to free up disk space. + +- `isync`: The `isync` compatibility wrapper was removed and the Master/Slave terminology has been deprecated and should be replaced with Far/Near in the configuration file. + +- The nix-gc service now accepts randomizedDelaySec (default: 0) and persistent (default: true) parameters. By default nix-gc will now run immediately if it would have been triggered at least once during the time when the timer was inactive. + +- The `rustPlatform.buildRustPackage` function is split into several hooks: cargoSetupHook to set up vendoring for Cargo-based projects, cargoBuildHook to build a project using Cargo, cargoInstallHook to install a project using Cargo, and cargoCheckHook to run tests in Cargo-based projects. With this change, mixed-language projects can use the relevant hooks within builders other than `buildRustPackage`. However, these changes also required several API changes to `buildRustPackage` itself: + + - The `target` argument was removed. Instead, `buildRustPackage` will always use the same target as the C/C++ compiler that is used. + + - The `cargoParallelTestThreads` argument was removed. Parallel tests are now disabled through `dontUseCargoParallelTests`. + +- The `rustPlatform.maturinBuildHook` hook was added. This hook can be used with `buildPythonPackage` to build Python packages that are written in Rust and use Maturin as their build tool. + +- Kubernetes has [deprecated docker](https://kubernetes.io/blog/2020/12/02/dont-panic-kubernetes-and-docker/) as container runtime. As a consequence, the Kubernetes module now has support for configuration of custom remote container runtimes and enables containerd by default. Note that containerd is more strict regarding container image OCI-compliance. As an example, images with CMD or ENTRYPOINT defined as strings (not lists) will fail on containerd, while working fine on docker. Please test your setup and container images with containerd prior to upgrading. + +- The GitLab module now has support for automatic backups. A schedule can be set with the [services.gitlab.backup.startAt](options.html#opt-services.gitlab.backup.startAt) option. + +- Prior to this release, systemd would also read system units from an undocumented `/etc/systemd-mutable/system` path. This path has been dropped from the defaults. That path (or others) can be re-enabled by adding it to the [boot.extraSystemdUnitPaths](options.html#opt-boot.extraSystemdUnitPaths) list. + +- PostgreSQL 9.5 is scheduled EOL during the 21.05 life cycle and has been removed. + +- [Xfce4](https://www.xfce.org/) relies on GIO/GVfs for userspace virtual filesystem access in applications like [thunar](https://docs.xfce.org/xfce/thunar/) and [gigolo](https://docs.xfce.org/apps/gigolo/). For that to work, the gvfs nixos service is enabled by default, and it can be configured with the specific package that provides GVfs. Until now Xfce4 was setting it to use a lighter version of GVfs (without support for samba). To avoid conflicts with other desktop environments this setting has been dropped. Users that still want it should add the following to their system configuration: + + ```nix + { + services.gvfs.package = pkgs.gvfs.override { samba = null; }; + } + ``` + +- The newly enabled `systemd-pstore.service` now automatically evacuates crashdumps and panic logs from the persistent storage to `/var/lib/systemd/pstore`. This prevents NVRAM from filling up, which ensures the latest diagnostic data is always stored and alleviates problems with writing new boot configurations. + +- Nixpkgs now contains [automatically packaged GNOME Shell extensions](https://github.com/NixOS/nixpkgs/pull/118232) from the [GNOME Extensions](https://extensions.gnome.org/) portal. You can find them, filed by their UUID, under `gnome38Extensions` attribute for GNOME 3.38 and under `gnome40Extensions` for GNOME 40. Finally, the `gnomeExtensions` attribute contains extensions for the latest GNOME Shell version in Nixpkgs, listed under a more human-friendly name. The unqualified attribute scope also contains manually packaged extensions. Note that the automatically packaged extensions are provided for convenience and are not checked or guaranteed to work. + +- Erlang/OTP versions older than R21 got dropped. We also dropped the cuter package, as it was purely an example of how to build a package. We also dropped `lfe_1_2` as it could not build with R21+. Moving forward, we expect to only support 3 yearly releases of OTP. diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2105.xml b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2105.xml deleted file mode 100644 index 54abbb6e38..0000000000 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2105.xml +++ /dev/null @@ -1,1266 +0,0 @@ -
- Release 21.05 (“Okapi”, 2021.05/31) - - - Support is planned until the end of December 2021, handing over to 21.11. - -
- Highlights - - - In addition to numerous new and upgraded packages, this release has the - following highlights: - - - - - - - Core version changes: - - - - - gcc: 9.3.0 -> 10.3.0 - - - - - glibc: 2.30 -> 2.32 - - - - - default linux: 5.4 -> 5.10, all supported kernels available - - - - - mesa: 20.1.7 -> 21.0.1 - - - - - - - Desktop Environments: - - - - - GNOME: 3.36 -> 40, see its release notes - - - - - Plasma5: 5.18.5 -> 5.21.3 - - - - - kdeApplications: 20.08.1 -> 20.12.3 - - - - - cinnamon: 4.6 -> 4.8.1 - - - - - - - - Programming Languages and Frameworks: - - - - - - Python optimizations were disabled again. Builds with optimizations enabled - are not reproducible. Optimizations can now be enabled with an option. - - - - - - - The linux_latest kernel was updated to the 5.12 series. It currently is not officially supported for use with the zfs filesystem. If you use zfs, you should use a different kernel version (either the LTS kernel, or track a specific one). - - - -
- -
- New Services - - - The following new services were added since the last release: - - - - - - GNURadio 3.8 was - finally - packaged, along with a rewrite to the Nix expressions, allowing users to - override the features upstream supports selecting to compile or not to. - Additionally, the attribute gnuradio and gnuradio3_7 - now point to an externally wrapped by default derivations, that allow you to - also add `extraPythonPackages` to the Python interpreter used by GNURadio. - Missing environmental variables needed for operational GUI were also added - (#75478). - - - - - - Keycloak, - an open source identity and access management server with - support for OpenID Connect, - OAUTH 2.0 and - SAML - 2.0. - - - See the Keycloak - section of the NixOS manual for more information. - - - - - Web Services Dynamic Discovery host daemon - - - - - Discourse, a - modern and open source discussion platform. - - - See the Discourse - section of the NixOS manual for more information. - - - - - Nebula VPN - - - - -
- -
- Backward Incompatibilities - - - When upgrading from a previous release, please be aware of the following - incompatible changes: - - - - - GNOME desktop environment was upgraded to 40, see the release notes for 40.0 and 3.38. The gnome3 attribute set has been renamed to gnome and so have been the NixOS options. - - - - - If you are using to assign - custom names to network interfaces, this may stop working due to a change - in the initialisation of dhcpcd and systemd networkd. To avoid this, either - move them to or see the new - Assigning custom names section - of the NixOS manual for an example using networkd links. - - - - - The module has been removed. - It was broken since the switch to cgroups-v2. - - - - - The linuxPackages.ati_drivers_x11 kernel modules have been removed. - The drivers only supported kernels prior to 4.2, and thus have become obsolete. - - - - - The systemConfig kernel parameter is no longer added to boot loader entries. It has been unused since September 2010, but if do have a system generation from that era, you will now be unable to boot into them. - - - - - systemd-journal2gelf no longer parses json and expects the receiving system to handle it. How to achieve this with Graylog is described in this GitHub issue. - - - - - If the services.dbus module is enabled, then - the user D-Bus session is now always socket activated. The - associated options services.dbus.socketActivated - and services.xserver.startDbusSession have - therefore been removed and you will receive a warning if - they are present in your configuration. This change makes the - user D-Bus session available also for non-graphical logins. - - - - - The networking.wireless.iwd module now installs - the upstream-provided 80-iwd.link file, which sets the NamePolicy= - for all wlan devices to "keep kernel", to avoid race conditions - between iwd and networkd. If you don't want this, you can set - systemd.network.links."80-iwd" = lib.mkForce {}. - - - - - rubyMinimal was removed due to being unused and - unusable. The default ruby interpreter includes JIT support, which makes - it reference it's compiler. Since JIT support is probably needed by some - Gems, it was decided to enable this feature with all cc references by - default, and allow to build a Ruby derivation without references to cc, - by setting jitSupport = false; in an overlay. See - #90151 - for more info. - - - - - Setting now also affects which keys will use. - - WARNING: If you are using these options in combination do make sure that any key paths you use are present in ! - - - - - The option has been renamed to - . The path of font directory - has also been changed to /run/current-system/sw/share/X11/fonts, - for consistency with other X11 resources. - - - - - A number of options have been renamed in the kicad interface. oceSupport - has been renamed to withOCE, withOCCT has been renamed - to withOCC, ngspiceSupport has been renamed to - withNgspice, and scriptingSupport has been renamed to - withScripting. Additionally, kicad/base.nix no longer - provides default argument values since these are provided by - kicad/default.nix. - - - - - The socket for the pdns-recursor module was moved from /var/lib/pdns-recursor - to /run/pdns-recursor to match upstream. - - - - - Paperwork was updated to version 2. The on-disk format slightly changed, - and it is not possible to downgrade from Paperwork 2 back to Paperwork - 1.3. Back your documents up before upgrading. See this thread for more details. - - - - - PowerDNS has been updated from 4.2.x to 4.3.x. Please - be sure to review the Upgrade Notes - provided by upstream before upgrading. Worth specifically noting is that the service now runs - entirely as a dedicated pdns user, instead of starting as root - and dropping privileges, as well as the default socket-dir location changing from - /var/lib/powerdns to /run/pdns. - - - - - The mediatomb service is - now using by default the new and maintained fork - gerbera package instead of the unmaintained - mediatomb package. If you want to keep the old - behavior, you must declare it with: - - services.mediatomb.package = pkgs.mediatomb; - - One new option openFirewall has been introduced which - defaults to false. If you relied on the service declaration to add the - firewall rules itself before, you should now declare it with: - - services.mediatomb.openFirewall = true; - - - - - - xfsprogs was update from 4.19 to 5.11. It now enables reflink support by default on filesystem creation. - Support for reflinks was added with an experimental status to kernel 4.9 and deemed stable in kernel 4.16. - If you want to be able to mount XFS filesystems created with this release of xfsprogs on kernel releases older than those, you need to format them - with mkfs.xfs -m reflink=0. - - - - - The uWSGI server is now built with POSIX capabilities. As a consequence, - root is no longer required in emperor mode and the service defaults to - running as the unprivileged uwsgi user. Any additional - capability can be added via the new option - . - The previous behaviour can be restored by setting: - - = "root"; - = "root"; - = - { - uid = "uwsgi"; - gid = "uwsgi"; - }; - - - - Another incompatibility from the previous release is that vassals running under a - different user or group need to use immediate-{uid,gid} - instead of the usual uid,gid options. - - - - - btc1 has been abandoned upstream, and removed. - - - - - cpp_ethereum (aleth) has been abandoned upstream, and removed. - - - - - riak-cs package removed along with services.riak-cs module. - - - - - stanchion package removed along with services.stanchion module. - - - - - mutt has been updated to a new major version (2.x), which comes with - some backward incompatible changes that are described in the - release notes for Mutt 2.0. - - - - - vim and neovim switched to Python 3, dropping all Python 2 support. - - - - - networking.wireguard.interfaces.<name>.generatePrivateKeyFile, - which is off by default, had a chmod race condition - fixed. As an aside, the parent directory's permissions were widened, - and the key files were made owner-writable. - This only affects newly created keys. - However, if the exact permissions are important for your setup, read - #121294. - - - - - boot.zfs.forceImportAll - previously did nothing, but has been fixed. However its default has been - changed to false to preserve the existing default - behaviour. If you have this explicitly set to true, - please note that your non-root pools will now be forcibly imported. - - - - - openafs now points to openafs_1_8, - which is the new stable release. OpenAFS 1.6 was removed. - - - - - The WireGuard module gained a new option - - that implements refreshing the IP of DNS-based endpoints periodically - (which WireGuard itself - cannot do). - - - - - MariaDB has been updated to 10.5. - Before you upgrade, it would be best to take a backup of your database and read - - Incompatible Changes Between 10.4 and 10.5. - After the upgrade you will need to run mysql_upgrade. - - - - - The TokuDB storage engine dropped in mariadb 10.5 and removed in mariadb 10.6. - It is recommended to switch to RocksDB. See also TokuDB and - MDEV-19780: Remove the TokuDB storage engine. - - - - - The openldap module now has support for OLC-style - configuration, users of the configDir option may wish - to migrate. If you continue to use configDir, ensure that - olcPidFile is set to /run/slapd/slapd.pid. - - - As a result, extraConfig and extraDatabaseConfig - are removed. To help with migration, you can convert your slapd.conf - file to OLC configuration with the following script (find the location of this - configuration file by running systemctl status openldap, it is the - -f option. - - - TMPDIR=$(mktemp -d) - slaptest -f /path/to/slapd.conf -F $TMPDIR - slapcat -F $TMPDIR -n0 -H 'ldap:///???(!(objectClass=olcSchemaConfig))' - - - This will dump your current configuration in LDIF format, which should be - straightforward to convert into Nix settings. This does not show your schema - configuration, as this is unnecessarily verbose for users of the default schemas - and slaptest is buggy with schemas directly in the config file. - - - - - Amazon EC2 and OpenStack Compute (nova) images now re-fetch instance meta data and user data from the instance - metadata service (IMDS) on each boot. For example: stopping an EC2 instance, changing its user data, and - restarting the instance will now cause it to fetch and apply the new user data. - - - - Specifically, /etc/ec2-metadata is re-populated on each boot. Some NixOS scripts that read - from this directory are guarded to only run if the files they want to manipulate do not already exist, and so - will not re-apply their changes if the IMDS response changes. Examples: root's SSH key is - only added if /root/.ssh/authorized_keys does not exist, and SSH host keys are only set from - user data if they do not exist in /etc/ssh. - - - - - - The rspamd services is now sandboxed. It is run as - a dynamic user instead of root, so secrets and other files may have to - be moved or their permissions may have to be fixed. The sockets are now - located in /run/rspamd instead of /run. - - - - - Enabling the Tor client no longer silently also enables and - configures Privoxy, and the - services.tor.client.privoxy.enable option has - been removed. To enable Privoxy, and to configure it to use - Tor's faster port, use the following configuration: - - - = true; - = true; - - - - - The services.tor module has a new exhaustively typed option following RFC 0042; backward compatibility with old options has been preserved when aliasing was possible. - The corresponding systemd service has been hardened, - but there is a chance that the service still requires more permissions, - so please report any related trouble on the bugtracker. - Onion services v3 are now supported in . - A new option as been introduced for allowing connections on all the TCP ports configured. - - - - - The options services.slurm.dbdserver.storagePass - and services.slurm.dbdserver.configFile have been removed. - Use services.slurm.dbdserver.storagePassFile instead to provide the database password. - Extra config options can be given via the option services.slurm.dbdserver.extraConfig. The actual configuration file is created on the fly on startup of the service. - This avoids that the password gets exposed in the nix store. - - - - - The wafHook hook does not wrap Python anymore. - Packages depending on wafHook need to include any Python into their nativeBuildInputs. - - - - - Starting with version 1.7.0, the project formerly named CodiMD - is now named HedgeDoc. - New installations will no longer use the old name for users, state directories and such, this needs to be considered when moving state to a more recent NixOS installation. - Based on , existing installations will continue to work. - - - - - The fish-foreign-env package has been replaced with - fishPlugins.foreign-env, in which the fish - functions have been relocated to the - vendor_functions.d directory to be loaded automatically. - - - - - The prometheus json exporter is now managed by the prometheus community. Together with additional features - some backwards incompatibilities were introduced. - Most importantly the exporter no longer accepts a fixed command-line parameter to specify the URL of the - endpoint serving JSON. It now expects this URL to be passed as an URL parameter, when scraping the exporter's - /probe endpoint. - In the prometheus scrape configuration the scrape target might look like this: - -http://some.json-exporter.host:7979/probe?target=https://example.com/some/json/endpoint - - - - Existing configuration for the exporter needs to be updated, but can partially be re-used. - Documentation is available in the upstream repository and a small example for NixOS is available - in the corresponding NixOS test. - - - These changes also affect , which is - just a preconfigured instance of the json exporter. - - - For more information, take a look at the - official documentation of the json_exporter. - - - - - Androidenv was updated, removing the includeDocs and lldbVersions - arguments. Docs only covered a single version of the Android SDK, LLDB is now bundled with the NDK, - and both are no longer available to download from the Android package repositories. Additionally, since - the package lists have been updated, some older versions of Android packages may not be bundled. If you - depend on older versions of Android packages, we recommend overriding the repo. - - - Android packages are now loaded from a repo.json file created by parsing Android repo XML files. The arguments - repoJson and repoXmls have been added to allow overriding the built-in - androidenv repo.json with your own. Additionally, license files are now written to allow compatibility - with Gradle-based tools, and the extraLicenses argument has been added to accept more - SDK licenses if your project requires it. See the androidenv documentation for more details. - - - - - The attribute mpi is now consistently used to - provide a default, system-wide MPI implementation. - The default implementation is openmpi, which has been used before by - all derivations affects by this change. - Note that all packages that have used mpi ? null in the input - for optional MPI builds, have been changed to the boolean input paramater - useMpi to enable building with MPI. - - Building all packages with mpich instead - of the default openmpi can now be achived like this: - -self: super: -{ - mpi = super.mpich; -} - - - - - - The Searx module has been updated with the ability to configure the - service declaratively and uWSGI integration. - The option services.searx.configFile has been renamed - to for consistency with - the new . In addition, the - searx uid and gid reservations have been removed - since they were not necessary: the service is now running with a - dynamically allocated uid. - - - - - The libinput module has been updated with the ability to configure mouse and touchpad settings separately. - The options in services.xserver.libinput have been renamed to services.xserver.libinput.touchpad, - while there is a new services.xserver.libinput.mouse for mouse related configuration. - - - Since touchpad options no longer apply to all devices, you may want to replicate your touchpad configuration in - mouse section. - - - - - ALSA OSS emulation (sound.enableOSSEmulation) is now disabled by default. - - - - - Thinkfan as been updated to 1.2.x, which comes with a - new YAML based configuration format. For this reason, several NixOS options - of the thinkfan module have been changed to non-backward compatible types. - In addition, a new option has - been added. - - - Please read the - thinkfan documentation before updating. - - - - - Adobe Flash Player support has been dropped from the tree. In particular, - the following packages no longer support it: - - chromium - firefox - qt48 - qt5.qtwebkit - - Additionally, packages flashplayer and - hal-flash were removed along with the - services.flashpolicyd module. - - - - - The security.rngd module has been removed. - It was disabled by default in 20.09 as it was functionally redundant - with krngd in the linux kernel. It is not necessary for any device that the kernel recognises - as an hardware RNG, as it will automatically run the krngd task to periodically collect random - data from the device and mix it into the kernel's RNG. - - - The default SMTP port for GitLab has been changed to - 25 from its previous default of - 465. If you depended on this default, you - should now set the - option. - - - - - The default version of ImageMagick has been updated from 6 to 7. - You can use imagemagick6, - imagemagick6_light, and - imagemagick6Big if you need the older version. - - - - - no longer uses the deprecated cirrus and vesa device dependent X drivers by default. It also enables both amdgpu and nouveau drivers by default now. - - - - - The kindlegen package is gone, because it is no longer supported or hosted by Amazon. Sadly, its replacement, Kindle Previewer, has no Linux support. However, there are other ways to generate MOBI files. See the discussion for more info. - - - - - The apacheKafka packages are now built with - version-matched JREs. Versions 2.6 and above, the ones that recommend it, - use jdk11, while versions below remain on jdk8. The NixOS service has - been adjusted to start the service using the same version as the package, - adjustable with the new - services.apache-kafka.jre - option. Furthermore, the default list of - services.apache-kafka.jvmOptions - have been removed. You should set your own according to the - upstream documentation - for your Kafka version. - - - - - The kodi package has been modified to allow concise addon management. Consider - the following configuration from previous releases of NixOS to install kodi, - including the kodiPackages.inputstream-adaptive and kodiPackages.vfs-sftp - addons: - - -environment.systemPackages = [ - pkgs.kodi -]; - -nixpkgs.config.kodi = { - enableInputStreamAdaptive = true; - enableVFSSFTP = true; -}; - - - All Kodi config flags have been removed, and as a result the above configuration - should now be written as: - - -environment.systemPackages = [ - (pkgs.kodi.withPackages (p: with p; [ - inputstream-adaptive - vfs-sftp - ])) -]; - - - - - - now includes the nano package. - If pkgs.nano is not added to the list, - make sure another editor is installed and the EDITOR - environment variable is set to it. - Environment variables can be set using . - - - - - changed type to a list of paths, required for specifiyng multiple data directories for using with erasure coding. - Currently, the service doesn't enforce nor checks the correct number of paths to correspond to minio requirements. - - - - - All CUDA toolkit versions prior to CUDA 10 have been removed. - - - - - The kbdKeymaps package was removed since dvp and neo - are now included in kbd. - - If you want to use the Programmer Dvorak Keyboard Layout, you have to use - dvorak-programmer in - now instead of dvp. - In it's still dvp. - - - - - The babeld service is now being run as an unprivileged user. To achieve that the module configures - skip-kernel-setup true and takes care of setting forwarding and rp_filter sysctls by itself as well - as for each interface in services.babeld.interfaces. - - - - - The option has been renamed to and - now follows RFC 0042. - - - - - The yadm dotfile manager has been updated from 2.x to 3.x, which has new (XDG) default locations for some data/state files. Most yadm commands will fail and print a legacy path warning (which describes how to upgrade/migrate your repository). If you have scripts, daemons, scheduled jobs, shell profiles, etc. that invoke yadm, expect them to fail or misbehave until you perform this migration and prepare accordingly. - - - - - Instead of determining - automatically based on , the latest - version is always used because old versions are not officially supported. - - - Furthermore, Radicale's systemd unit was hardened which might break some - deployments. In particular, a non-default - filesystem_folder has to be added to - if - the deprecated is used. - - - - - In the module, use of --reuse-key - parameter for Lego has been removed. It was introduced for HKPK, but this security - feature is now deprecated. It is a better security practice to rotate key pairs - instead of always keeping the same. If you need to keep this parameter, you can add - it back using extraLegoRenewFlags as an option for the - appropriate certificate. - - - -
- -
- Other Notable Changes - - - - - stdenv.lib has been deprecated and will break - eval in 21.11. Please use pkgs.lib instead. - See #108938 - for details. - - - - - - GNURadio has a - pkgs attribute set, and there's a gnuradio.callPackage - function that extends pkgs with a mkDerivation, and a - mkDerivationWith, like Qt5. Now all gnuradio.pkgs are - defined with gnuradio.callPackage and some packages that depend - on gnuradio are defined with this as well. - - - - - Privoxy has been updated - to version 3.0.32 (See announcement). - Compared to the previous release, Privoxy has gained support for HTTPS - inspection (still experimental), Brotli decompression, several new filters - and lots of bug fixes, including security ones. In addition, the package - is now built with compression and external filters support, which were - previously disabled. - - - Regarding the NixOS module, new options for HTTPS inspection have been added - and has been replaced by the new - - (See RFC 0042 - for the motivation). - - - - - Kodi has been updated to version 19.1 "Matrix". See - the announcement for - further details. - - - - - The option has been removed as - it only supported a single setting which would always be the default. - Instead new RFC - 0042 compliant - and options have - been introduced. - - - - - Nginx has been updated to stable version 1.20.0. - Now nginx uses the zlib-ng library by default. - - - - - KDE Gear (formerly KDE Applications) is upgraded to 21.04, see its - release - notes for details. - - - The kdeApplications package set is now kdeGear, - in keeping with the new name. The old name remains for compatibility, but - it is deprecated. - - - - - Libreswan has been updated - to version 4.4. The package now includes example configurations and manual - pages by default. The NixOS module has been changed to use the upstream - systemd units and write the configuration in the /etc/ipsec.d/ - directory. In addition, two new options have been added to - specify connection policies - () - and disable send/receive redirects - (). - - - - - - The Mailman NixOS module (services.mailman) has a new - option , defaulting - to true, that controls integration with Postfix. - - - If this option is disabled, default MTA config becomes not set and you - should set the options in services.mailman.settings.mta - according to the desired configuration as described in - Mailman documentation. - - - - - The default-version of nextcloud is nextcloud21. - Please note that it's not possible to upgrade nextcloud - across multiple major versions! This means that it's e.g. not possible to upgrade - from nextcloud18 to nextcloud20 in a single deploy and - most 20.09 users will have to upgrade to nextcloud20 - first. - - - The package can be manually upgraded by setting - to nextcloud21. - - - - - The setting defaults to 127.0.0.1 now, making Redis listen on the loopback interface only, and not all public network interfaces. - - - - - NixOS now emits a deprecation warning if systemd's StartLimitInterval setting is used in a serviceConfig section instead of in a unitConfig; that setting is deprecated and now undocumented for the service section by systemd upstream, but still effective and somewhat buggy there, which can be confusing. See #45785 for details. - - - All services should use or StartLimitIntervalSec in instead. - - - - - The mediatomb service - declares new options. It also adapts existing options so the - configuration generation is now lazy. The existing option - customCfg (defaults to false), when enabled, stops - the service configuration generation completely. It then expects the - users to provide their own correct configuration at the right location - (whereas the configuration was generated and not used at all before). - The new option transcodingOption (defaults to no) - allows a generated configuration. It makes the mediatomb service pulls - the necessary runtime dependencies in the nix store (whereas it was - generated with hardcoded values before). The new option - mediaDirectories allows the users to declare autoscan - media directories from their nixos configuration: - - services.mediatomb.mediaDirectories = [ - { path = "/var/lib/mediatomb/pictures"; recursive = false; hidden-files = false; } - { path = "/var/lib/mediatomb/audio"; recursive = true; hidden-files = false; } - ]; - - - - - - The Unbound DNS resolver service (services.unbound) has been refactored to allow reloading, control sockets and to fix startup ordering issues. - - - - It is now possible to enable a local UNIX control socket for unbound by setting the - option. - - - - Previously we just applied a very minimal set of restrictions and - trusted unbound to properly drop root privs and capabilities. - - - - As of this we are (for the most part) just using the upstream - example unit file for unbound. The main difference is that we start - unbound as unbound user with the required capabilities instead of - letting unbound do the chroot & uid/gid changes. - - - - The upstream unit configuration this is based on is a lot stricter with - all kinds of permissions then our previous variant. It also came with - the default of having the Type set to notify, therefore we are now also - using the unbound-with-systemd package here. Unbound will start up, - read the configuration files and start listening on the configured ports - before systemd will declare the unit active (running). - This will likely help with startup order and the occasional race condition during system - activation where the DNS service is started but not yet ready to answer - queries. Services depending on nss-lookup.target or unbound.service - are now be able to use unbound when those targets have been reached. - - - - Additionally to the much stricter runtime environment the - /dev/urandom mount lines we previously had in the code (that - randomly failed during the stop-phase) have been removed as systemd will take care of those for us. - - - - The preStart script is now only required if we enabled the trust - anchor updates (which are still enabled by default). - - - - Another benefit of the refactoring is that we can now issue reloads via - either pkill -HUP unbound and systemctl reload unbound to reload the - running configuration without taking the daemon offline. A prerequisite - of this was that unbound configuration is available on a well known path - on the file system. We are using the path /etc/unbound/unbound.conf as that is the - default in the CLI tooling which in turn enables us to use - unbound-control without passing a custom configuration location. - - - - The module has also been reworked to be RFC - 0042 compliant. As such, - has been removed and replaced - by . - has been renamed to . - - - - and - have also been changed to - use the new settings interface. You can follow the instructions when - executing nixos-rebuild to upgrade your configuration to - use the new interface. - - - - - The services.dnscrypt-proxy2 module now takes the upstream's example configuration and updates it with the user's settings. - - An option has been added to restore the old behaviour if you prefer to declare the configuration from scratch. - - - - - NixOS now defaults to the unified cgroup hierarchy (cgroupsv2). - See the Fedora Article for 31 - for details on why this is desirable, and how it impacts containers. - - - If you want to run containers with a runtime that does not yet support cgroupsv2, - you can switch back to the old behaviour by setting - = false; - and rebooting. - - - - - PulseAudio was upgraded to 14.0, with changes to the handling of default sinks. - See its release notes. - - - - - GNOME users may wish to delete their ~/.config/pulse due to the changes to stream routing - logic. See PulseAudio bug 832 - for more information. - - - - - The zookeeper package does not provide - zooInspector.sh anymore, as that "contrib" has - been dropped from upstream releases. - - - - - In the ACME module, the data used to build the hash for the account - directory has changed to accomodate new features to reduce account - rate limit issues. This will trigger new account creation on the first - rebuild following this update. No issues are expected to arise from this, - thanks to the new account creation handling. - - - - - now always ensures home directory permissions to be 0700. - Permissions had previously been ignored for already existing home directories, possibly leaving them readable by others. - The option's description was incorrect regarding ownership management and has been simplified greatly. - - - - - When defining a new user, one of and is now required. - This is to prevent accidentally giving a UID above 1000 to system users, which could have unexpected consequences, like running user activation scripts for system users. - Note that users defined with an explicit UID below 500 are exempted from this check, as has no effect for those. - - - - - The security.apparmor module, - for the AppArmor - Mandatory Access Control system, - has been substantialy improved along with related tools, - so that module maintainers can now more easily write AppArmor profiles for NixOS. - The most notable change on the user-side is the new option , - replacing the previous profiles option - to provide a way to disable a profile - and to select whether to confine in enforce mode (default) - or in complain mode (see journalctl -b --grep apparmor). - Security-minded users may also want to enable , - at the cost of having some of their processes killed - when updating to a NixOS version introducing new AppArmor profiles. - - - - - The GNOME desktop manager once again installs gnome.epiphany by default. - - - - - NixOS now generates empty /etc/netgroup. - /etc/netgroup defines network-wide groups and may affect to setups using NIS. - - - - - Platforms, like stdenv.hostPlatform, no longer have a platform attribute. - It has been (mostly) flattened away: - - - platform.gcc is now gcc - platform.kernel* is now linux-kernel.* - - - Additionally, platform.kernelArch moved to the top level as linuxArch to match the other *Arch variables. - - - The platform grouping of these things never meant anything, and was just a historial/implementation artifact that was overdue removal. - - - - - services.restic now uses a dedicated cache directory for every backup defined in services.restic.backups. The old global cache directory, /root/.cache/restic, is now unused and can be removed to free up disk space. - - - - - isync: The isync compatibility wrapper was removed and the Master/Slave - terminology has been deprecated and should be replaced with Far/Near in the configuration file. - - - - - The nix-gc service now accepts randomizedDelaySec (default: 0) and persistent (default: true) parameters. - By default nix-gc will now run immediately if it would have been triggered at least - once during the time when the timer was inactive. - - - - - The rustPlatform.buildRustPackage function is split into several hooks: - cargoSetupHook to set up vendoring for Cargo-based projects, - cargoBuildHook to build a project using Cargo, - cargoInstallHook to install a project using Cargo, and - cargoCheckHook to run tests in Cargo-based projects. With this change, - mixed-language projects can use the relevant hooks within builders other than - buildRustPackage. However, these changes also required several API changes to - buildRustPackage itself: - - - - - The target argument was removed. Instead, buildRustPackage - will always use the same target as the C/C++ compiler that is used. - - - - - The cargoParallelTestThreads argument was removed. Parallel tests are - now disabled through dontUseCargoParallelTests. - - - - - - - - The rustPlatform.maturinBuildHook hook was added. This hook can be used - with buildPythonPackage to build Python packages that are written in Rust - and use Maturin as their build tool. - - - - - Kubernetes has deprecated docker as container runtime. - As a consequence, the Kubernetes module now has support for configuration of custom remote container runtimes and enables containerd by default. - Note that containerd is more strict regarding container image OCI-compliance. - As an example, images with CMD or ENTRYPOINT defined as strings (not lists) will fail on containerd, while working fine on docker. - Please test your setup and container images with containerd prior to upgrading. - - - - - The GitLab module now has support for automatic backups. A - schedule can be set with the - services.gitlab.backup.startAt - option. - - - - - Prior to this release, systemd would also read system units from an undocumented /etc/systemd-mutable/system path. - This path has been dropped from the defaults. That path (or others) can be re-enabled by adding it to the - boot.extraSystemdUnitPaths list. - - - - - PostgreSQL 9.5 is scheduled EOL during the 21.05 life cycle and has been removed. - - - - - Xfce4 relies on - GIO/GVfs for userspace virtual filesystem access in applications - like thunar and - gigolo. - For that to work, the gvfs nixos service is enabled by default, - and it can be configured with the specific package that provides - GVfs. Until now Xfce4 was setting it to use a lighter version of - GVfs (without support for samba). To avoid conflicts with other - desktop environments this setting has been dropped. Users that - still want it should add the following to their system - configuration: - - = pkgs.gvfs.override { samba = null; }; - - - - - - The newly enabled systemd-pstore.service now automatically evacuates crashdumps and panic logs from the persistent storage to /var/lib/systemd/pstore. - This prevents NVRAM from filling up, which ensures the latest diagnostic data is always stored and alleviates problems with writing new boot configurations. - - - - - Nixpkgs now contains automatically packaged GNOME Shell extensions from the GNOME Extensions portal. You can find them, filed by their UUID, under gnome38Extensions attribute for GNOME 3.38 and under gnome40Extensions for GNOME 40. Finally, the gnomeExtensions attribute contains extensions for the latest GNOME Shell version in Nixpkgs, listed under a more human-friendly name. The unqualified attribute scope also contains manually packaged extensions. Note that the automatically packaged extensions are provided for convenience and are not checked or guaranteed to work. - - - - - Erlang/OTP versions older than R21 got dropped. We also dropped the cuter package, as it was purely an example of how to build a package. - We also dropped lfe_1_2 as it could not build with R21+. - Moving forward, we expect to only support 3 yearly releases of OTP. - - - - -
-
diff --git a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2111.section.md b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2111.section.md index 577d759293..afb1299604 100644 --- a/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2111.section.md +++ b/third_party/nixpkgs/nixos/doc/manual/release-notes/rl-2111.section.md @@ -1,27 +1,92 @@ -# Release 21.11 (“?”, 2021.11/??) {#release-21.11} +# Release 21.11 (“?”, 2021.11/??) {#sec-release-21.11} In addition to numerous new and upgraded packages, this release has the following highlights: -* Support is planned until the end of April 2022, handing over to 22.05. +- Support is planned until the end of April 2022, handing over to 22.05. -## Highlights +## Highlights {#sec-release-21.11-highlights} -* PHP now defaults to PHP 8.0, updated from 7.4. +- PHP now defaults to PHP 8.0, updated from 7.4. -## New Services +## New Services {#sec-release-21.11-new-services} -* [geoipupdate](https://github.com/maxmind/geoipupdate), a GeoIP - database updater from MaxMind. Available as - [services.geoipupdate](options.html#opt-services.geoipupdate.enable). +- [geoipupdate](https://github.com/maxmind/geoipupdate), a GeoIP database updater from MaxMind. Available as [services.geoipupdate](options.html#opt-services.geoipupdate.enable). -## Backward Incompatibilities +- [sourcehut](https://sr.ht), a collection of tools useful for software development. Available as [services.sourcehut](options.html#opt-services.sourcehut.enable). -* The `staticjinja` package has been upgraded from 1.0.4 to 2.0.0 +- [ucarp](https://download.pureftpd.org/pub/ucarp/README), an userspace implementation of the Common Address Redundancy Protocol (CARP). Available as [networking.ucarp](options.html#opt-networking.ucarp.enable). -* `services.geoip-updater` was broken and has been replaced by - [services.geoipupdate](options.html#opt-services.geoipupdate.enable). +## Backward Incompatibilities {#sec-release-21.11-incompatibilities} -* PHP 7.3 is no longer supported due to upstream not supporting this - version for the entire lifecycle of the 21.11 release. +- The `staticjinja` package has been upgraded from 1.0.4 to 2.0.0 -## Other Notable Changes +- `services.geoip-updater` was broken and has been replaced by [services.geoipupdate](options.html#opt-services.geoipupdate.enable). + +- PHP 7.3 is no longer supported due to upstream not supporting this version for the entire lifecycle of the 21.11 release. + +- Those making use of `buildBazelPackage` will need to regenerate the fetch hashes (preferred), or set `fetchConfigured = false;`. + +- `consul` was upgraded to a new major release with breaking changes, see [upstream changelog](https://github.com/hashicorp/consul/releases/tag/v1.10.0). + +- fsharp41 has been removed in preference to use the latest dotnet-sdk + +- The following F#-related packages have been removed for being unmaintaned. Please use `fetchNuGet` for specific packages. + + - ExtCore + - Fake + - Fantomas + - FsCheck + - FsCheck262 + - FsCheckNunit + - FSharpAutoComplete + - FSharpCompilerCodeDom + - FSharpCompilerService + - FSharpCompilerTools + - FSharpCore302 + - FSharpCore3125 + - FSharpCore4001 + - FSharpCore4117 + - FSharpData + - FSharpData225 + - FSharpDataSQLProvider + - FSharpFormatting + - FsLexYacc + - FsLexYacc706 + - FsLexYaccRuntime + - FsPickler + - FsUnit + - Projekt + - Suave + - UnionArgParser + - ExcelDnaRegistration + - MathNetNumerics + +- `programs.x2goserver` is now `services.x2goserver` + +- The following dotnet-related packages have been removed for being unmaintaned. Please use `fetchNuGet` for specific packages. + - Autofac + - SystemValueTuple + - MicrosoftDiaSymReader + - MicrosoftDiaSymReaderPortablePdb + - SystemCollectionsImmutable + - SystemCollectionsImmutable131 + - SystemReflectionMetadata + - NUnit350 + - Deedle + - ExcelDna + - GitVersionTree + - NDeskOptions + +* The `antlr` package now defaults to the 4.x release instead of the + old 2.7.7 version. + +* The `libwnck` package now defaults to the 3.x release instead of the + old 2.31.0 version. + +## Other Notable Changes {#sec-release-21.11-notable-changes} + +- The setting [`services.openssh.logLevel`](options.html#opt-services.openssh.logLevel) `"VERBOSE"` `"INFO"`. This brings NixOS in line with upstream and other Linux distributions, and reduces log spam on servers due to bruteforcing botnets. + + However, if [`services.fail2ban.enable`](options.html#opt-services.fail2ban.enable) is `true`, the `fail2ban` will override the verbosity to `"VERBOSE"`, so that `fail2ban` can observe the failed login attempts from the SSH logs. + +- Sway: The terminal emulator `rxvt-unicode` is no longer installed by default via `programs.sway.extraPackages`. The current default configuration uses `alacritty` (and soon `foot`) so this is only an issue when using a customized configuration and not installing `rxvt-unicode` explicitly. diff --git a/third_party/nixpkgs/nixos/lib/build-vms.nix b/third_party/nixpkgs/nixos/lib/build-vms.nix index 064e44f643..f0a58628c6 100644 --- a/third_party/nixpkgs/nixos/lib/build-vms.nix +++ b/third_party/nixpkgs/nixos/lib/build-vms.nix @@ -41,7 +41,7 @@ rec { # The human version (e.g. 21.05-pre) is left as is, because it is useful # for external modules that test with e.g. nixosTest and rely on that # version number. - config.system.nixos.revision = "constant-nixos-revision"; + config.system.nixos.revision = mkForce "constant-nixos-revision"; } { key = "nodes"; _module.args.nodes = nodes; } ] ++ optional minimal ../modules/testing/minimal-kernel.nix; diff --git a/third_party/nixpkgs/nixos/lib/make-disk-image.nix b/third_party/nixpkgs/nixos/lib/make-disk-image.nix index 7d40d3b554..55643facea 100644 --- a/third_party/nixpkgs/nixos/lib/make-disk-image.nix +++ b/third_party/nixpkgs/nixos/lib/make-disk-image.nix @@ -278,7 +278,7 @@ let format' = format; in let additionalSpace=$(( $(numfmt --from=iec '${additionalSpace}') + reservedSpace )) # Compute required space in filesystem blocks - diskUsage=$(find . ! -type d -exec 'du' '--apparent-size' '--block-size' "${blockSize}" '{}' ';' | cut -f1 | sum_lines) + diskUsage=$(find . ! -type d -print0 | du --files0-from=- --apparent-size --block-size "${blockSize}" | cut -f1 | sum_lines) # Each inode takes space! numInodes=$(find . | wc -l) # Convert to bytes, inodes take two blocks each! diff --git a/third_party/nixpkgs/nixos/lib/test-driver/test-driver.py b/third_party/nixpkgs/nixos/lib/test-driver/test-driver.py index e0e8b0fb71..7f4dd5963c 100644 --- a/third_party/nixpkgs/nixos/lib/test-driver/test-driver.py +++ b/third_party/nixpkgs/nixos/lib/test-driver/test-driver.py @@ -441,7 +441,7 @@ class Machine: def execute(self, command: str) -> Tuple[int, str]: self.connect() - out_command = "( {} ); echo '|!=EOF' $?\n".format(command) + out_command = "( set -euo pipefail; {} ); echo '|!=EOF' $?\n".format(command) self.shell.send(out_command.encode()) output = "" @@ -462,9 +462,10 @@ class Machine: Should only be used during test development, not in the production test.""" self.connect() self.log("Terminal is ready (there is no prompt):") - telnet = telnetlib.Telnet() - telnet.sock = self.shell # type: ignore - telnet.interact() + subprocess.run( + ["socat", "READLINE", f"FD:{self.shell.fileno()}"], + pass_fds=[self.shell.fileno()], + ) def succeed(self, *commands: str) -> str: """Execute each command and check that it succeeds.""" @@ -907,7 +908,6 @@ class Machine: def create_machine(args: Dict[str, Any]) -> Machine: global log args["log"] = log - args["redirectSerial"] = os.environ.get("USE_SERIAL", "0") == "1" return Machine(args) @@ -974,7 +974,7 @@ def subtest(name: str) -> Iterator[None]: if __name__ == "__main__": - arg_parser = argparse.ArgumentParser() + arg_parser = argparse.ArgumentParser(prog="nixos-test-driver") arg_parser.add_argument( "-K", "--keep-vm-state", diff --git a/third_party/nixpkgs/nixos/lib/testing-python.nix b/third_party/nixpkgs/nixos/lib/testing-python.nix index 99d0a9a0bf..768f1dc2a1 100644 --- a/third_party/nixpkgs/nixos/lib/testing-python.nix +++ b/third_party/nixpkgs/nixos/lib/testing-python.nix @@ -16,13 +16,19 @@ rec { inherit pkgs; - - mkTestDriver = + # Reifies and correctly wraps the python test driver for + # the respective qemu version and with or without ocr support + pythonTestDriver = { + qemu_pkg ? pkgs.qemu_test + , enableOCR ? false + }: let - testDriverScript = ./test-driver/test-driver.py; - in - qemu_pkg: stdenv.mkDerivation { name = "nixos-test-driver"; + testDriverScript = ./test-driver/test-driver.py; + ocrProg = tesseract4.override { enableLanguages = [ "eng" ]; }; + imagemagick_tiff = imagemagick_light.override { inherit libtiff; }; + in stdenv.mkDerivation { + inherit name; nativeBuildInputs = [ makeWrapper ]; buildInputs = [ (python3.withPackages (p: [ p.ptpython p.colorama ])) ]; @@ -35,7 +41,7 @@ rec { buildPhase = '' python < maxTestNameLen then + abort + ("The name of the test '${testName}' must not be longer than ${toString maxTestNameLen} " + + "it's currently ${toString testNameLen} characters long.") + else + "nixos-test-driver-${testName}"; + + vlans = map (m: m.config.virtualisation.vlans) (lib.attrValues nodes); + vms = map (m: m.config.system.build.vm) (lib.attrValues nodes); + + nodeHostNames = map (c: c.config.system.name) (lib.attrValues nodes); + + invalidNodeNames = lib.filter + (node: builtins.match "^[A-z_]([A-z0-9_]+)?$" node == null) + (builtins.attrNames nodes); + + testScript' = + # Call the test script with the computed nodes. + if lib.isFunction testScript + then testScript { inherit nodes; } + else testScript; + + in + if lib.length invalidNodeNames > 0 then + throw '' + Cannot create machines out of (${lib.concatStringsSep ", " invalidNodeNames})! + All machines are referenced as python variables in the testing framework which will break the + script when special characters are used. + Please stick to alphanumeric chars and underscores as separation. + '' + else lib.warnIf skipLint "Linting is disabled" (runCommand testDriverName + { + inherit testName; + nativeBuildInputs = [ makeWrapper ]; + testScript = testScript'; + preferLocalBuild = true; + passthru = passthru // { + inherit nodes; + }; + } + '' + mkdir -p $out/bin + + echo -n "$testScript" > $out/test-script + ${lib.optionalString (!skipLint) '' + PYFLAKES_BUILTINS="$( + echo -n ${lib.escapeShellArg (lib.concatStringsSep "," nodeHostNames)}, + < ${lib.escapeShellArg "${testDriver}/nix-support/driver-symbols"} + )" ${python3Packages.pyflakes}/bin/pyflakes $out/test-script + ''} + + ln -s ${testDriver}/bin/nixos-test-driver $out/bin/ + vms=($(for i in ${toString vms}; do echo $i/bin/run-*-vm; done)) + wrapProgram $out/bin/nixos-test-driver \ + --add-flags "''${vms[*]}" \ + --run "export testScript=\"\$(${coreutils}/bin/cat $out/test-script)\"" \ + --set VLANS '${toString vlans}' + ln -s ${testDriver}/bin/nixos-test-driver $out/bin/nixos-run-vms + wrapProgram $out/bin/nixos-run-vms \ + --add-flags "''${vms[*]}" \ + --set tests 'start_all(); join_all();' \ + --set VLANS '${toString vlans}' + ''); + + # Make a full-blown test makeTest = { testScript , enableOCR ? false @@ -106,129 +198,47 @@ rec { , ... } @ t: let - # A standard store path to the vm monitor is built like this: - # /tmp/nix-build-vm-test-run-$name.drv-0/vm-state-machine/monitor - # The max filename length of a unix domain socket is 108 bytes. - # This means $name can at most be 50 bytes long. - maxTestNameLen = 50; - testNameLen = builtins.stringLength name; - - - - ocrProg = tesseract4.override { enableLanguages = [ "eng" ]; }; - - imagemagick_tiff = imagemagick_light.override { inherit libtiff; }; - - # Generate convenience wrappers for running the test driver - # interactively with the specified network, and for starting the - # VMs from the command line. - mkDriver = qemu_pkg: + nodes = qemu_pkg: let build-vms = import ./build-vms.nix { inherit system pkgs minimal specialArgs; - extraConfigurations = extraConfigurations ++ (pkgs.lib.optional (qemu_pkg != null) + extraConfigurations = extraConfigurations ++ [( { virtualisation.qemu.package = qemu_pkg; - } - ) ++ [( - { # Ensure we do not use aliases. Ideally this is only set # when the test framework is used by Nixpkgs NixOS tests. nixpkgs.config.allowAliases = false; } )]; }; - - # FIXME: get this pkg from the module system - testDriver = mkTestDriver (if qemu_pkg == null then pkgs.qemu_test else qemu_pkg); - - nodes = build-vms.buildVirtualNetwork ( - t.nodes or (if t ? machine then { machine = t.machine; } else { }) - ); - vlans = map (m: m.config.virtualisation.vlans) (lib.attrValues nodes); - vms = map (m: m.config.system.build.vm) (lib.attrValues nodes); - - testScript' = - # Call the test script with the computed nodes. - if lib.isFunction testScript - then testScript { inherit nodes; } - else testScript; - - testDriverName = with builtins; - if testNameLen > maxTestNameLen then - abort - ("The name of the test '${name}' must not be longer than ${toString maxTestNameLen} " + - "it's currently ${toString testNameLen} characters long.") - else - "nixos-test-driver-${name}"; in - lib.warnIf skipLint "Linting is disabled" (runCommand testDriverName - { - nativeBuildInputs = [ makeWrapper ]; - testScript = testScript'; - preferLocalBuild = true; - testName = name; - passthru = passthru // { - inherit nodes; - }; - } - '' - mkdir -p $out/bin + build-vms.buildVirtualNetwork ( + t.nodes or (if t ? machine then { machine = t.machine; } else { }) + ); - echo -n "$testScript" > $out/test-script - ${lib.optionalString (!skipLint) '' - PYFLAKES_BUILTINS="$( - echo -n ${lib.escapeShellArg (lib.concatStringsSep "," nodeHostNames)}, - < ${lib.escapeShellArg "${testDriver}/nix-support/driver-exports"} - )" ${python3Packages.pyflakes}/bin/pyflakes $out/test-script - ''} - - ln -s ${testDriver}/bin/nixos-test-driver $out/bin/ - vms=($(for i in ${toString vms}; do echo $i/bin/run-*-vm; done)) - wrapProgram $out/bin/nixos-test-driver \ - --add-flags "''${vms[*]}" \ - ${lib.optionalString enableOCR - "--prefix PATH : '${ocrProg}/bin:${imagemagick_tiff}/bin'"} \ - --run "export testScript=\"\$(${coreutils}/bin/cat $out/test-script)\"" \ - --set VLANS '${toString vlans}' - ln -s ${testDriver}/bin/nixos-test-driver $out/bin/nixos-run-vms - wrapProgram $out/bin/nixos-run-vms \ - --add-flags "''${vms[*]}" \ - ${lib.optionalString enableOCR "--prefix PATH : '${ocrProg}/bin'"} \ - --set tests 'start_all(); join_all();' \ - --set VLANS '${toString vlans}' \ - ${lib.optionalString (builtins.length vms == 1) "--set USE_SERIAL 1"} - ''); # " - - passMeta = drv: drv // lib.optionalAttrs (t ? meta) { - meta = (drv.meta or { }) // t.meta; + driver = setupDriverForTest { + inherit testScript enableOCR skipLint passthru; + testName = name; + qemu_pkg = pkgs.qemu_test; + nodes = nodes pkgs.qemu_test; + }; + driverInteractive = setupDriverForTest { + inherit testScript enableOCR skipLint passthru; + testName = name; + qemu_pkg = pkgs.qemu; + nodes = nodes pkgs.qemu; }; - driver = mkDriver null; - driverInteractive = mkDriver pkgs.qemu; - - test = passMeta (runTests { inherit driver pos; }); - - nodeNames = builtins.attrNames driver.nodes; - invalidNodeNames = lib.filter - (node: builtins.match "^[A-z_]([A-z0-9_]+)?$" node == null) - nodeNames; - - nodeHostNames = map (c: c.config.system.name) (lib.attrValues driver.nodes); + test = + let + passMeta = drv: drv // lib.optionalAttrs (t ? meta) { + meta = (drv.meta or { }) // t.meta; + }; + in passMeta (runTests { inherit driver pos; }); in - if lib.length invalidNodeNames > 0 then - throw '' - Cannot create machines out of (${lib.concatStringsSep ", " invalidNodeNames})! - All machines are referenced as python variables in the testing framework which will break the - script when special characters are used. - - Please stick to alphanumeric chars and underscores as separation. - '' - else test // { - inherit test driver driverInteractive; - inherit (driver) nodes; + inherit test driver driverInteractive nodes; }; runInMachine = @@ -236,7 +246,7 @@ rec { , machine , preBuild ? "" , postBuild ? "" - , qemu ? pkgs.qemu_test + , qemu_pkg ? pkgs.qemu_test , ... # ??? }: let @@ -273,6 +283,8 @@ rec { client.succeed("sync") # flush all data before pulling the plug ''; + testDriver = pythonTestDriver { inherit qemu_pkg; }; + vmRunCommand = writeText "vm-run" '' xchg=vm-state-client/xchg ${coreutils}/bin/mkdir $out @@ -291,7 +303,7 @@ rec { unset xchg export tests='${testScript}' - ${mkTestDriver qemu}/bin/nixos-test-driver --keep-vm-state ${vm.config.system.build.vm}/bin/run-*-vm + ${testDriver}/bin/nixos-test-driver --keep-vm-state ${vm.config.system.build.vm}/bin/run-*-vm ''; # */ in diff --git a/third_party/nixpkgs/nixos/lib/utils.nix b/third_party/nixpkgs/nixos/lib/utils.nix index c9dfdbed99..f1332ab559 100644 --- a/third_party/nixpkgs/nixos/lib/utils.nix +++ b/third_party/nixpkgs/nixos/lib/utils.nix @@ -14,8 +14,30 @@ rec { fsNeededForBoot = fs: fs.neededForBoot || elem fs.mountPoint pathsNeededForBoot; # Check whenever `b` depends on `a` as a fileSystem - fsBefore = a: b: a.mountPoint == b.device - || hasPrefix "${a.mountPoint}${optionalString (!(hasSuffix "/" a.mountPoint)) "/"}" b.mountPoint; + fsBefore = a: b: + let + # normalisePath adds a slash at the end of the path if it didn't already + # have one. + # + # The reason slashes are added at the end of each path is to prevent `b` + # from accidentally depending on `a` in cases like + # a = { mountPoint = "/aaa"; ... } + # b = { device = "/aaaa"; ... } + # Here a.mountPoint *is* a prefix of b.device even though a.mountPoint is + # *not* a parent of b.device. If we add a slash at the end of each string, + # though, this is not a problem: "/aaa/" is not a prefix of "/aaaa/". + normalisePath = path: "${path}${optionalString (!(hasSuffix "/" path)) "/"}"; + normalise = mount: mount // { device = normalisePath (toString mount.device); + mountPoint = normalisePath mount.mountPoint; + depends = map normalisePath mount.depends; + }; + + a' = normalise a; + b' = normalise b; + + in hasPrefix a'.mountPoint b'.device + || hasPrefix a'.mountPoint b'.mountPoint + || any (hasPrefix a'.mountPoint) b'.depends; # Escape a path according to the systemd rules, e.g. /dev/xyzzy # becomes dev-xyzzy. FIXME: slow. diff --git a/third_party/nixpkgs/nixos/modules/config/console.nix b/third_party/nixpkgs/nixos/modules/config/console.nix index 5be7f06c05..c5150305bd 100644 --- a/third_party/nixpkgs/nixos/modules/config/console.nix +++ b/third_party/nixpkgs/nixos/modules/config/console.nix @@ -43,13 +43,14 @@ in options.console = { font = mkOption { - type = types.str; + type = with types; either str path; default = "Lat2-Terminus16"; example = "LatArCyrHeb-16"; description = '' The font used for the virtual consoles. Leave empty to use whatever the setfont program considers the default font. + Can be either a font name or a path to a PSF font file. ''; }; diff --git a/third_party/nixpkgs/nixos/modules/config/pulseaudio.nix b/third_party/nixpkgs/nixos/modules/config/pulseaudio.nix index 0266bbfb12..3f7ae109e8 100644 --- a/third_party/nixpkgs/nixos/modules/config/pulseaudio.nix +++ b/third_party/nixpkgs/nixos/modules/config/pulseaudio.nix @@ -17,9 +17,9 @@ let binary = "${getBin overriddenPackage}/bin/pulseaudio"; binaryNoDaemon = "${binary} --daemonize=no"; - # Forces 32bit pulseaudio and alsaPlugins to be built/supported for apps + # Forces 32bit pulseaudio and alsa-plugins to be built/supported for apps # using 32bit alsa on 64bit linux. - enable32BitAlsaPlugins = cfg.support32Bit && stdenv.isx86_64 && (pkgs.pkgsi686Linux.alsaLib != null && pkgs.pkgsi686Linux.libpulseaudio != null); + enable32BitAlsaPlugins = cfg.support32Bit && stdenv.isx86_64 && (pkgs.pkgsi686Linux.alsa-lib != null && pkgs.pkgsi686Linux.libpulseaudio != null); myConfigFile = @@ -62,18 +62,18 @@ let # plugin. alsaConf = writeText "asound.conf" ('' pcm_type.pulse { - libs.native = ${pkgs.alsaPlugins}/lib/alsa-lib/libasound_module_pcm_pulse.so ; + libs.native = ${pkgs.alsa-plugins}/lib/alsa-lib/libasound_module_pcm_pulse.so ; ${lib.optionalString enable32BitAlsaPlugins - "libs.32Bit = ${pkgs.pkgsi686Linux.alsaPlugins}/lib/alsa-lib/libasound_module_pcm_pulse.so ;"} + "libs.32Bit = ${pkgs.pkgsi686Linux.alsa-plugins}/lib/alsa-lib/libasound_module_pcm_pulse.so ;"} } pcm.!default { type pulse hint.description "Default Audio Device (via PulseAudio)" } ctl_type.pulse { - libs.native = ${pkgs.alsaPlugins}/lib/alsa-lib/libasound_module_ctl_pulse.so ; + libs.native = ${pkgs.alsa-plugins}/lib/alsa-lib/libasound_module_ctl_pulse.so ; ${lib.optionalString enable32BitAlsaPlugins - "libs.32Bit = ${pkgs.pkgsi686Linux.alsaPlugins}/lib/alsa-lib/libasound_module_ctl_pulse.so ;"} + "libs.32Bit = ${pkgs.pkgsi686Linux.alsa-plugins}/lib/alsa-lib/libasound_module_ctl_pulse.so ;"} } ctl.!default { type pulse diff --git a/third_party/nixpkgs/nixos/modules/config/swap.nix b/third_party/nixpkgs/nixos/modules/config/swap.nix index 59bc9e9d11..a37b46b8c4 100644 --- a/third_party/nixpkgs/nixos/modules/config/swap.nix +++ b/third_party/nixpkgs/nixos/modules/config/swap.nix @@ -114,6 +114,19 @@ let ''; }; + discardPolicy = mkOption { + default = null; + example = "once"; + type = types.nullOr (types.enum ["once" "pages" "both" ]); + description = '' + Specify the discard policy for the swap device. If "once", then the + whole swap space is discarded at swapon invocation. If "pages", + asynchronous discard on freed pages is performed, before returning to + the available pages pool. With "both", both policies are activated. + See swapon(8) for more information. + ''; + }; + deviceName = mkOption { type = types.str; internal = true; diff --git a/third_party/nixpkgs/nixos/modules/config/xdg/portals/wlr.nix b/third_party/nixpkgs/nixos/modules/config/xdg/portals/wlr.nix new file mode 100644 index 0000000000..55baab0026 --- /dev/null +++ b/third_party/nixpkgs/nixos/modules/config/xdg/portals/wlr.nix @@ -0,0 +1,67 @@ +{ config, pkgs, lib, ... }: + +with lib; + +let + cfg = config.xdg.portal.wlr; + package = pkgs.xdg-desktop-portal-wlr; + settingsFormat = pkgs.formats.ini { }; + configFile = settingsFormat.generate "xdg-desktop-portal-wlr.ini" cfg.settings; +in +{ + meta = { + maintainers = with maintainers; [ minijackson ]; + }; + + options.xdg.portal.wlr = { + enable = mkEnableOption '' + desktop portal for wlroots-based desktops + + This will add the xdg-desktop-portal-wlr package into + the option, and provide the + configuration file + ''; + + settings = mkOption { + description = '' + Configuration for xdg-desktop-portal-wlr. + + See xdg-desktop-portal-wlr(5) for supported + values. + ''; + + type = types.submodule { + freeformType = settingsFormat.type; + }; + + default = { }; + + # Example taken from the manpage + example = literalExample '' + { + screencast = { + output_name = "HDMI-A-1"; + max_fps = 30; + exec_before = "disable_notifications.sh"; + exec_after = "enable_notifications.sh"; + chooser_type = "simple"; + chooser_cmd = "''${pkgs.slurp}/bin/slurp -f %o -or"; + }; + } + ''; + }; + }; + + config = mkIf cfg.enable { + xdg.portal = { + enable = true; + extraPortals = [ package ]; + }; + + systemd.user.services.xdg-desktop-portal-wlr.serviceConfig.ExecStart = [ + # Empty ExecStart value to override the field + "" + "${package}/libexec/xdg-desktop-portal-wlr --config=${configFile}" + ]; + }; +} diff --git a/third_party/nixpkgs/nixos/modules/hardware/corectrl.nix b/third_party/nixpkgs/nixos/modules/hardware/corectrl.nix new file mode 100644 index 0000000000..3185f6486c --- /dev/null +++ b/third_party/nixpkgs/nixos/modules/hardware/corectrl.nix @@ -0,0 +1,62 @@ +{ config, pkgs, lib, ... }: + +with lib; + +let + cfg = config.programs.corectrl; +in +{ + options.programs.corectrl = { + enable = mkEnableOption '' + A tool to overclock amd graphics cards and processors. + Add your user to the corectrl group to run corectrl without needing to enter your password + ''; + + gpuOverclock = { + enable = mkEnableOption '' + true + ''; + ppfeaturemask = mkOption { + type = types.str; + default = "0xfffd7fff"; + example = "0xffffffff"; + description = '' + Sets the `amdgpu.ppfeaturemask` kernel option. + In particular, it is used here to set the overdrive bit. + Default is `0xfffd7fff` as it is less likely to cause flicker issues. + Setting it to `0xffffffff` enables all features. + ''; + }; + }; + }; + + config = mkIf cfg.enable (lib.mkMerge [ + { + environment.systemPackages = [ pkgs.corectrl ]; + + services.dbus.packages = [ pkgs.corectrl ]; + + users.groups.corectrl = { }; + + security.polkit.extraConfig = '' + polkit.addRule(function(action, subject) { + if ((action.id == "org.corectrl.helper.init" || + action.id == "org.corectrl.helperkiller.init") && + subject.local == true && + subject.active == true && + subject.isInGroup("corectrl")) { + return polkit.Result.YES; + } + }); + ''; + } + + (lib.mkIf cfg.gpuOverclock.enable { + # https://git.kernel.org/pub/scm/linux/kernel/git/torvalds/linux.git/tree/drivers/gpu/drm/amd/include/amd_shared.h#n169 + # The overdrive bit + boot.kernelParams = [ "amdgpu.ppfeaturemask=${cfg.gpuOverclock.ppfeaturemask}" ]; + }) + ]); + + meta.maintainers = with lib.maintainers; [ artturin ]; +} diff --git a/third_party/nixpkgs/nixos/modules/hardware/system-76.nix b/third_party/nixpkgs/nixos/modules/hardware/system-76.nix index ed661fd330..d4896541db 100644 --- a/third_party/nixpkgs/nixos/modules/hardware/system-76.nix +++ b/third_party/nixpkgs/nixos/modules/hardware/system-76.nix @@ -34,6 +34,25 @@ let wantedBy = [ "multi-user.target" ]; }; }; + + power-pkg = config.boot.kernelPackages.system76-power; + powerConfig = mkIf cfg.power-daemon.enable { + # Make system76-power usable by root from the command line. + environment.systemPackages = [ power-pkg ]; + + services.dbus.packages = [ power-pkg ]; + + systemd.services.system76-power = { + description = "System76 Power Daemon"; + serviceConfig = { + ExecStart = "${power-pkg}/bin/system76-power daemon"; + Restart = "on-failure"; + Type = "dbus"; + BusName = "com.system76.PowerDaemon"; + }; + wantedBy = [ "multi-user.target" ]; + }; + }; in { options = { hardware.system76 = { @@ -52,8 +71,15 @@ in { description = "Whether to make the system76 out-of-tree kernel modules available"; type = types.bool; }; + + power-daemon.enable = mkOption { + default = cfg.enableAll; + example = true; + description = "Whether to enable the system76 power daemon"; + type = types.bool; + }; }; }; - config = mkMerge [ moduleConfig firmwareConfig ]; + config = mkMerge [ moduleConfig firmwareConfig powerConfig ]; } diff --git a/third_party/nixpkgs/nixos/modules/hardware/video/nvidia.nix b/third_party/nixpkgs/nixos/modules/hardware/video/nvidia.nix index 97accc7b99..2be9da8f42 100644 --- a/third_party/nixpkgs/nixos/modules/hardware/video/nvidia.nix +++ b/third_party/nixpkgs/nixos/modules/hardware/video/nvidia.nix @@ -92,7 +92,7 @@ in example = "PCI:4:0:0"; description = '' Bus ID of the AMD APU. You can find it using lspci; for example if lspci - shows the AMD APU at "04:00.0", set this option to "PCI:4:0:0". + shows the AMD APU at "04:00.0", set this option to "PCI:4:0:0". ''; }; @@ -159,7 +159,7 @@ in description = '' The NVIDIA X11 derivation to use. ''; - example = "config.boot.kernelPackages.nvidiaPackages.legacy340"; + example = "config.boot.kernelPackages.nvidiaPackages.legacy_340"; }; }; diff --git a/third_party/nixpkgs/nixos/modules/installer/cd-dvd/iso-image.nix b/third_party/nixpkgs/nixos/modules/installer/cd-dvd/iso-image.nix index c2836b5a9a..d94af0b5bf 100644 --- a/third_party/nixpkgs/nixos/modules/installer/cd-dvd/iso-image.nix +++ b/third_party/nixpkgs/nixos/modules/installer/cd-dvd/iso-image.nix @@ -428,7 +428,8 @@ let # Rewrite dates for everything in the FS find . -exec touch --date=2000-01-01 {} + - usage_size=$(du -sb --apparent-size . | tr -cd '[:digit:]') + # Round up to the nearest multiple of 1MB, for more deterministic du output + usage_size=$(( $(du -s --block-size=1M --apparent-size . | tr -cd '[:digit:]') * 1024 * 1024 )) # Make the image 110% as big as the files need to make up for FAT overhead image_size=$(( ($usage_size * 110) / 100 )) # Make the image fit blocks of 1M @@ -438,7 +439,16 @@ let echo "Image size: $image_size" truncate --size=$image_size "$out" faketime "2000-01-01 00:00:00" mkfs.vfat -i 12345678 -n EFIBOOT "$out" - mcopy -psvm -i "$out" ./EFI ./boot :: + + # Force a fixed order in mcopy for better determinism, and avoid file globbing + for d in $(find EFI boot -type d | sort); do + faketime "2000-01-01 00:00:00" mmd -i "$out" "::/$d" + done + + for f in $(find EFI boot -type f | sort); do + mcopy -pvm -i "$out" "$f" "::/$f" + done + # Verify the FAT partition. fsck.vfat -vn "$out" ''; # */ @@ -680,6 +690,12 @@ in "upperdir=/nix/.rw-store/store" "workdir=/nix/.rw-store/work" ]; + + depends = [ + "/nix/.ro-store" + "/nix/.rw-store/store" + "/nix/.rw-store/work" + ]; }; boot.initrd.availableKernelModules = [ "squashfs" "iso9660" "uas" "overlay" ]; diff --git a/third_party/nixpkgs/nixos/modules/installer/netboot/netboot.nix b/third_party/nixpkgs/nixos/modules/installer/netboot/netboot.nix index fa074fdfcc..238ab6d061 100644 --- a/third_party/nixpkgs/nixos/modules/installer/netboot/netboot.nix +++ b/third_party/nixpkgs/nixos/modules/installer/netboot/netboot.nix @@ -57,6 +57,12 @@ with lib; "upperdir=/nix/.rw-store/store" "workdir=/nix/.rw-store/work" ]; + + depends = [ + "/nix/.ro-store" + "/nix/.rw-store/store" + "/nix/.rw-store/work" + ]; }; boot.initrd.availableKernelModules = [ "squashfs" "overlay" ]; diff --git a/third_party/nixpkgs/nixos/modules/installer/sd-card/sd-image.nix b/third_party/nixpkgs/nixos/modules/installer/sd-card/sd-image.nix index d0fe79903d..2a10a77300 100644 --- a/third_party/nixpkgs/nixos/modules/installer/sd-card/sd-image.nix +++ b/third_party/nixpkgs/nixos/modules/installer/sd-card/sd-image.nix @@ -55,6 +55,22 @@ in ''; }; + firmwarePartitionOffset = mkOption { + type = types.int; + default = 8; + description = '' + Gap in front of the /boot/firmware partition, in mebibytes (1024×1024 + bytes). + Can be increased to make more space for boards requiring to dd u-boot + SPL before actual partitions. + + Unless you are building your own images pre-configured with an + installed U-Boot, you can instead opt to delete the existing `FIRMWARE` + partition, which is used **only** for the Raspberry Pi family of + hardware. + ''; + }; + firmwarePartitionID = mkOption { type = types.str; default = "0x2178694e"; @@ -177,7 +193,7 @@ in zstd -d --no-progress "${rootfsImage}" -o ./root-fs.img # Gap in front of the first partition, in MiB - gap=8 + gap=${toString config.sdImage.firmwarePartitionOffset} # Create the image file sized to fit /boot/firmware and /, plus slack for the gap. rootSizeBlocks=$(du -B 512 --apparent-size ./root-fs.img | awk '{ print $1 }') diff --git a/third_party/nixpkgs/nixos/modules/misc/ids.nix b/third_party/nixpkgs/nixos/modules/misc/ids.nix index 7ea2940292..2cbbbc522e 100644 --- a/third_party/nixpkgs/nixos/modules/misc/ids.nix +++ b/third_party/nixpkgs/nixos/modules/misc/ids.nix @@ -252,7 +252,7 @@ in postsrsd = 220; opendkim = 221; dspam = 222; - gale = 223; + # gale = 223; removed 2021-06-10 matrix-synapse = 224; rspamd = 225; # rmilter = 226; # unused, removed 2019-08-22 @@ -562,7 +562,7 @@ in postsrsd = 220; opendkim = 221; dspam = 222; - gale = 223; + # gale = 223; removed 2021-06-10 matrix-synapse = 224; rspamd = 225; # rmilter = 226; # unused, removed 2019-08-22 diff --git a/third_party/nixpkgs/nixos/modules/module-list.nix b/third_party/nixpkgs/nixos/modules/module-list.nix index fc04997bd2..d3a3143c17 100644 --- a/third_party/nixpkgs/nixos/modules/module-list.nix +++ b/third_party/nixpkgs/nixos/modules/module-list.nix @@ -9,6 +9,7 @@ ./config/xdg/menus.nix ./config/xdg/mime.nix ./config/xdg/portal.nix + ./config/xdg/portals/wlr.nix ./config/appstream.nix ./config/console.nix ./config/xdg/sounds.nix @@ -44,6 +45,7 @@ ./hardware/ckb-next.nix ./hardware/cpu/amd-microcode.nix ./hardware/cpu/intel-microcode.nix + ./hardware/corectrl.nix ./hardware/digitalbitbox.nix ./hardware/device-tree.nix ./hardware/i2c.nix @@ -151,6 +153,7 @@ ./programs/iftop.nix ./programs/iotop.nix ./programs/java.nix + ./programs/kdeconnect.nix ./programs/kbdlight.nix ./programs/less.nix ./programs/liboping.nix @@ -197,7 +200,6 @@ ./programs/waybar.nix ./programs/wireshark.nix ./programs/wshowkeys.nix - ./programs/x2goserver.nix ./programs/xfs_quota.nix ./programs/xonsh.nix ./programs/xss-lock.nix @@ -594,6 +596,7 @@ ./services/monitoring/loki.nix ./services/monitoring/longview.nix ./services/monitoring/mackerel-agent.nix + ./services/monitoring/metricbeat.nix ./services/monitoring/monit.nix ./services/monitoring/munin.nix ./services/monitoring/nagios.nix @@ -691,11 +694,11 @@ ./services/networking/flannel.nix ./services/networking/freenet.nix ./services/networking/freeradius.nix - ./services/networking/gale.nix ./services/networking/gateone.nix ./services/networking/gdomap.nix ./services/networking/ghostunnel.nix ./services/networking/git-daemon.nix + ./services/networking/globalprotect-vpn.nix ./services/networking/gnunet.nix ./services/networking/go-neb.nix ./services/networking/go-shadowsocks2.nix @@ -839,6 +842,7 @@ ./services/networking/tox-node.nix ./services/networking/toxvpn.nix ./services/networking/tvheadend.nix + ./services/networking/ucarp.nix ./services/networking/unbound.nix ./services/networking/unifi.nix ./services/networking/v2ray.nix @@ -853,6 +857,7 @@ ./services/networking/xandikos.nix ./services/networking/xinetd.nix ./services/networking/xl2tpd.nix + ./services/networking/x2goserver.nix ./services/networking/xrdp.nix ./services/networking/yggdrasil.nix ./services/networking/zerobin.nix diff --git a/third_party/nixpkgs/nixos/modules/programs/appgate-sdp.nix b/third_party/nixpkgs/nixos/modules/programs/appgate-sdp.nix index 1dec4ecf9e..12cb542f4d 100644 --- a/third_party/nixpkgs/nixos/modules/programs/appgate-sdp.nix +++ b/third_party/nixpkgs/nixos/modules/programs/appgate-sdp.nix @@ -5,8 +5,7 @@ with lib; { options = { programs.appgate-sdp = { - enable = mkEnableOption - "AppGate SDP VPN client"; + enable = mkEnableOption "AppGate SDP VPN client"; }; }; @@ -17,7 +16,10 @@ with lib; systemd = { packages = [ pkgs.appgate-sdp ]; # https://github.com/NixOS/nixpkgs/issues/81138 - services.appgatedriver.wantedBy = [ "multi-user.target" ]; + services.appgatedriver.wantedBy = [ "multi-user.target" ]; + services.appgate-dumb-resolver.path = [ pkgs.e2fsprogs ]; + services.appgate-resolver.path = [ pkgs.procps pkgs.e2fsprogs ]; + services.appgatedriver.path = [ pkgs.e2fsprogs ]; }; }; } diff --git a/third_party/nixpkgs/nixos/modules/programs/kdeconnect.nix b/third_party/nixpkgs/nixos/modules/programs/kdeconnect.nix new file mode 100644 index 0000000000..673449b9f6 --- /dev/null +++ b/third_party/nixpkgs/nixos/modules/programs/kdeconnect.nix @@ -0,0 +1,35 @@ +{ config, pkgs, lib, ... }: +with lib; +{ + options.programs.kdeconnect = { + enable = mkEnableOption '' + kdeconnect. + + Note that it will open the TCP and UDP port from + 1714 to 1764 as they are needed for it to function properly. + You can use the to use + gnomeExtensions.gsconnect as an alternative + implementation if you use Gnome. + ''; + package = mkOption { + default = pkgs.kdeconnect; + defaultText = "pkgs.kdeconnect"; + type = types.package; + example = literalExample "pkgs.gnomeExtensions.gsconnect"; + description = '' + The package providing the implementation for kdeconnect. + ''; + }; + }; + config = + let + cfg = config.programs.kdeconnect; + in + mkIf cfg.enable { + environment.systemPackages = [ cfg.package ]; + networking.firewall = rec { + allowedTCPPortRanges = [ { from = 1714; to = 1764; } ]; + allowedUDPPortRanges = allowedTCPPortRanges; + }; + }; +} diff --git a/third_party/nixpkgs/nixos/modules/programs/phosh.nix b/third_party/nixpkgs/nixos/modules/programs/phosh.nix index 1f50065f78..cba3f73768 100644 --- a/third_party/nixpkgs/nixos/modules/programs/phosh.nix +++ b/third_party/nixpkgs/nixos/modules/programs/phosh.nix @@ -143,10 +143,14 @@ in { oskItem ]; + systemd.packages = [ pkgs.phosh ]; + programs.feedbackd.enable = true; security.pam.services.phosh = {}; + hardware.opengl.enable = mkDefault true; + services.gnome.core-shell.enable = true; services.gnome.core-os-services.enable = true; services.xserver.displayManager.sessionPackages = [ pkgs.phosh ]; diff --git a/third_party/nixpkgs/nixos/modules/programs/sway.nix b/third_party/nixpkgs/nixos/modules/programs/sway.nix index 3c09d9f00f..d5819a08e8 100644 --- a/third_party/nixpkgs/nixos/modules/programs/sway.nix +++ b/third_party/nixpkgs/nixos/modules/programs/sway.nix @@ -91,10 +91,9 @@ in { type = with types; listOf package; default = with pkgs; [ swaylock swayidle alacritty dmenu - rxvt-unicode # For backward compatibility (old default terminal) ]; defaultText = literalExample '' - with pkgs; [ swaylock swayidle rxvt-unicode alacritty dmenu ]; + with pkgs; [ swaylock swayidle alacritty dmenu ]; ''; example = literalExample '' with pkgs; [ diff --git a/third_party/nixpkgs/nixos/modules/security/acme.xml b/third_party/nixpkgs/nixos/modules/security/acme.xml index a78ff05f2e..8249da948c 100644 --- a/third_party/nixpkgs/nixos/modules/security/acme.xml +++ b/third_party/nixpkgs/nixos/modules/security/acme.xml @@ -194,7 +194,7 @@ services.httpd = { This is useful if you want to generate a wildcard certificate, since ACME servers will only hand out wildcard certs over DNS validation. - There a number of supported DNS providers and servers you can utilise, + There are a number of supported DNS providers and servers you can utilise, see the lego docs for provider/server specific configuration values. For the sake of these docs, we will provide a fully self-hosted example using bind. diff --git a/third_party/nixpkgs/nixos/modules/security/pam.nix b/third_party/nixpkgs/nixos/modules/security/pam.nix index 3cde7e9515..5699025601 100644 --- a/third_party/nixpkgs/nixos/modules/security/pam.nix +++ b/third_party/nixpkgs/nixos/modules/security/pam.nix @@ -397,8 +397,6 @@ let "auth required pam_faillock.so"} ${optionalString (config.security.pam.enableSSHAgentAuth && cfg.sshAgentAuth) "auth sufficient ${pkgs.pam_ssh_agent_auth}/libexec/pam_ssh_agent_auth.so file=${lib.concatStringsSep ":" config.services.openssh.authorizedKeysFiles}"} - ${optionalString cfg.fprintAuth - "auth sufficient ${pkgs.fprintd}/lib/security/pam_fprintd.so"} ${let p11 = config.security.pam.p11; in optionalString cfg.p11Auth "auth ${p11.control} ${pkgs.pam_p11}/lib/security/pam_p11.so ${pkgs.opensc}/lib/opensc-pkcs11.so"} ${let u2f = config.security.pam.u2f; in optionalString cfg.u2fAuth @@ -409,6 +407,8 @@ let "auth requisite ${pkgs.oathToolkit}/lib/security/pam_oath.so window=${toString oath.window} usersfile=${toString oath.usersFile} digits=${toString oath.digits}"} ${let yubi = config.security.pam.yubico; in optionalString cfg.yubicoAuth "auth ${yubi.control} ${pkgs.yubico-pam}/lib/security/pam_yubico.so mode=${toString yubi.mode} ${optionalString (yubi.mode == "client") "id=${toString yubi.id}"} ${optionalString yubi.debug "debug"}"} + ${optionalString cfg.fprintAuth + "auth sufficient ${pkgs.fprintd}/lib/security/pam_fprintd.so"} '' + # Modules in this block require having the password set in PAM_AUTHTOK. # pam_unix is marked as 'sufficient' on NixOS which means nothing will run diff --git a/third_party/nixpkgs/nixos/modules/security/pam_mount.nix b/third_party/nixpkgs/nixos/modules/security/pam_mount.nix index 9a0143c155..e25ace38f5 100644 --- a/third_party/nixpkgs/nixos/modules/security/pam_mount.nix +++ b/third_party/nixpkgs/nixos/modules/security/pam_mount.nix @@ -29,6 +29,28 @@ in xlink:href="http://pam-mount.sourceforge.net/pam_mount.conf.5.html" />. ''; }; + + additionalSearchPaths = mkOption { + type = types.listOf types.package; + default = []; + example = literalExample "[ pkgs.bindfs ]"; + description = '' + Additional programs to include in the search path of pam_mount. + Useful for example if you want to use some FUSE filesystems like bindfs. + ''; + }; + + fuseMountOptions = mkOption { + type = types.listOf types.str; + default = []; + example = literalExample '' + [ "nodev" "nosuid" "force-user=%(USER)" "gid=%(USERGID)" "perms=0700" "chmod-deny" "chown-deny" "chgrp-deny" ] + ''; + description = '' + Global mount options that apply to every FUSE volume. + You can define volume-specific options in the volume definitions. + ''; + }; }; }; @@ -60,11 +82,12 @@ in - ${pkgs.util-linux}/bin + ${makeBinPath ([ pkgs.util-linux ] ++ cfg.additionalSearchPaths)} + ${pkgs.fuse}/bin/mount.fuse %(VOLUME) %(MNTPT) -o ${concatStringsSep "," (cfg.fuseMountOptions ++ [ "%(OPTIONS)" ])} ${pkgs.pam_mount}/bin/mount.crypt %(VOLUME) %(MNTPT) ${pkgs.pam_mount}/bin/umount.crypt %(MNTPT) ${pkgs.pam_mount}/bin/pmvarrun -u %(USER) -o %(OPERATION) diff --git a/third_party/nixpkgs/nixos/modules/services/audio/alsa.nix b/third_party/nixpkgs/nixos/modules/services/audio/alsa.nix index aff3fe2ba4..0d743ed31d 100644 --- a/third_party/nixpkgs/nixos/modules/services/audio/alsa.nix +++ b/third_party/nixpkgs/nixos/modules/services/audio/alsa.nix @@ -5,7 +5,7 @@ with lib; let - inherit (pkgs) alsaUtils; + inherit (pkgs) alsa-utils; pulseaudioEnabled = config.hardware.pulseaudio.enable; @@ -88,13 +88,13 @@ in config = mkIf config.sound.enable { - environment.systemPackages = [ alsaUtils ]; + environment.systemPackages = [ alsa-utils ]; environment.etc = mkIf (!pulseaudioEnabled && config.sound.extraConfig != "") { "asound.conf".text = config.sound.extraConfig; }; # ALSA provides a udev rule for restoring volume settings. - services.udev.packages = [ alsaUtils ]; + services.udev.packages = [ alsa-utils ]; boot.kernelModules = optional config.sound.enableOSSEmulation "snd_pcm_oss"; @@ -107,7 +107,7 @@ in Type = "oneshot"; RemainAfterExit = true; ExecStart = "${pkgs.coreutils}/bin/mkdir -p /var/lib/alsa"; - ExecStop = "${alsaUtils}/sbin/alsactl store --ignore"; + ExecStop = "${alsa-utils}/sbin/alsactl store --ignore"; }; }; @@ -115,16 +115,16 @@ in enable = true; bindings = [ # "Mute" media key - { keys = [ 113 ]; events = [ "key" ]; command = "${alsaUtils}/bin/amixer -q set Master toggle"; } + { keys = [ 113 ]; events = [ "key" ]; command = "${alsa-utils}/bin/amixer -q set Master toggle"; } # "Lower Volume" media key - { keys = [ 114 ]; events = [ "key" "rep" ]; command = "${alsaUtils}/bin/amixer -q set Master ${config.sound.mediaKeys.volumeStep}- unmute"; } + { keys = [ 114 ]; events = [ "key" "rep" ]; command = "${alsa-utils}/bin/amixer -q set Master ${config.sound.mediaKeys.volumeStep}- unmute"; } # "Raise Volume" media key - { keys = [ 115 ]; events = [ "key" "rep" ]; command = "${alsaUtils}/bin/amixer -q set Master ${config.sound.mediaKeys.volumeStep}+ unmute"; } + { keys = [ 115 ]; events = [ "key" "rep" ]; command = "${alsa-utils}/bin/amixer -q set Master ${config.sound.mediaKeys.volumeStep}+ unmute"; } # "Mic Mute" media key - { keys = [ 190 ]; events = [ "key" ]; command = "${alsaUtils}/bin/amixer -q set Capture toggle"; } + { keys = [ 190 ]; events = [ "key" ]; command = "${alsa-utils}/bin/amixer -q set Capture toggle"; } ]; }; diff --git a/third_party/nixpkgs/nixos/modules/services/audio/jack.nix b/third_party/nixpkgs/nixos/modules/services/audio/jack.nix index f341b432f7..d0a95b87ee 100644 --- a/third_party/nixpkgs/nixos/modules/services/audio/jack.nix +++ b/third_party/nixpkgs/nixos/modules/services/audio/jack.nix @@ -8,7 +8,7 @@ let pcmPlugin = cfg.jackd.enable && cfg.alsa.enable; loopback = cfg.jackd.enable && cfg.loopback.enable; - enable32BitAlsaPlugins = cfg.alsa.support32Bit && pkgs.stdenv.isx86_64 && pkgs.pkgsi686Linux.alsaLib != null; + enable32BitAlsaPlugins = cfg.alsa.support32Bit && pkgs.stdenv.isx86_64 && pkgs.pkgsi686Linux.alsa-lib != null; umaskNeeded = versionOlder cfg.jackd.package.version "1.9.12"; bridgeNeeded = versionAtLeast cfg.jackd.package.version "1.9.12"; @@ -129,9 +129,9 @@ in { (mkIf pcmPlugin { sound.extraConfig = '' pcm_type.jack { - libs.native = ${pkgs.alsaPlugins}/lib/alsa-lib/libasound_module_pcm_jack.so ; + libs.native = ${pkgs.alsa-plugins}/lib/alsa-lib/libasound_module_pcm_jack.so ; ${lib.optionalString enable32BitAlsaPlugins - "libs.32Bit = ${pkgs.pkgsi686Linux.alsaPlugins}/lib/alsa-lib/libasound_module_pcm_jack.so ;"} + "libs.32Bit = ${pkgs.pkgsi686Linux.alsa-plugins}/lib/alsa-lib/libasound_module_pcm_jack.so ;"} } pcm.!default { @func getenv @@ -234,7 +234,7 @@ in { environment = { systemPackages = [ cfg.jackd.package ]; - etc."alsa/conf.d/50-jack.conf".source = "${pkgs.alsaPlugins}/etc/alsa/conf.d/50-jack.conf"; + etc."alsa/conf.d/50-jack.conf".source = "${pkgs.alsa-plugins}/etc/alsa/conf.d/50-jack.conf"; variables.JACK_PROMISCUOUS_SERVER = "jackaudio"; }; diff --git a/third_party/nixpkgs/nixos/modules/services/audio/roon-bridge.nix b/third_party/nixpkgs/nixos/modules/services/audio/roon-bridge.nix new file mode 100644 index 0000000000..85273a2039 --- /dev/null +++ b/third_party/nixpkgs/nixos/modules/services/audio/roon-bridge.nix @@ -0,0 +1,74 @@ +{ config, lib, pkgs, ... }: + +with lib; + +let + name = "roon-bridge"; + cfg = config.services.roon-bridge; +in { + options = { + services.roon-bridge = { + enable = mkEnableOption "Roon Bridge"; + openFirewall = mkOption { + type = types.bool; + default = false; + description = '' + Open ports in the firewall for the bridge. + + UDP: 9003 + TCP: 9100 - 9200 + ''; + }; + user = mkOption { + type = types.str; + default = "roon-bridge"; + description = '' + User to run the Roon bridge as. + ''; + }; + group = mkOption { + type = types.str; + default = "roon-bridge"; + description = '' + Group to run the Roon Bridge as. + ''; + }; + }; + }; + + config = mkIf cfg.enable { + systemd.services.roon-bridge = { + after = [ "network.target" ]; + description = "Roon Bridge"; + wantedBy = [ "multi-user.target" ]; + + environment.ROON_DATAROOT = "/var/lib/${name}"; + + serviceConfig = { + ExecStart = "${pkgs.roon-bridge}/start.sh"; + LimitNOFILE = 8192; + User = cfg.user; + Group = cfg.group; + StateDirectory = name; + }; + }; + + networking.firewall = mkIf cfg.openFirewall { + allowedTCPPortRanges = [ + { from = 9100; to = 9200; } + ]; + allowedUDPPorts = [ 9003 ]; + }; + + + users.groups.${cfg.group} = {}; + users.users.${cfg.user} = + if cfg.user == "roon-bridge" then { + isSystemUser = true; + description = "Roon Bridge user"; + group = cfg.group; + extraGroups = [ "audio" ]; + } + else {}; + }; +} diff --git a/third_party/nixpkgs/nixos/modules/services/backup/duplicity.nix b/third_party/nixpkgs/nixos/modules/services/backup/duplicity.nix index 1f6883ed02..6949fa8b99 100644 --- a/third_party/nixpkgs/nixos/modules/services/backup/duplicity.nix +++ b/third_party/nixpkgs/nixos/modules/services/backup/duplicity.nix @@ -157,7 +157,7 @@ in ${dup} cleanup ${target} --force ${extra} ${lib.optionalString (cfg.cleanup.maxAge != null) "${dup} remove-older-than ${lib.escapeShellArg cfg.cleanup.maxAge} ${target} --force ${extra}"} ${lib.optionalString (cfg.cleanup.maxFull != null) "${dup} remove-all-but-n-full ${toString cfg.cleanup.maxFull} ${target} --force ${extra}"} - ${lib.optionalString (cfg.cleanup.maxIncr != null) "${dup} remove-all-incr-but-n-full ${toString cfg.cleanup.maxIncr} ${target} --force ${extra}"} + ${lib.optionalString (cfg.cleanup.maxIncr != null) "${dup} remove-all-inc-of-but-n-full ${toString cfg.cleanup.maxIncr} ${target} --force ${extra}"} exec ${dup} ${if cfg.fullIfOlderThan == "always" then "full" else "incr"} ${lib.escapeShellArgs ( [ cfg.root cfg.targetUrl ] ++ concatMap (p: [ "--include" p ]) cfg.include diff --git a/third_party/nixpkgs/nixos/modules/services/databases/redis.nix b/third_party/nixpkgs/nixos/modules/services/databases/redis.nix index c4d51958e2..9c0740f28c 100644 --- a/third_party/nixpkgs/nixos/modules/services/databases/redis.nix +++ b/third_party/nixpkgs/nixos/modules/services/databases/redis.nix @@ -52,7 +52,7 @@ in { }; port = mkOption { - type = types.int; + type = types.port; default = 6379; description = "The port for Redis to listen to."; }; diff --git a/third_party/nixpkgs/nixos/modules/services/desktops/espanso.nix b/third_party/nixpkgs/nixos/modules/services/desktops/espanso.nix index cd2eadf881..4ef6724dda 100644 --- a/third_party/nixpkgs/nixos/modules/services/desktops/espanso.nix +++ b/third_party/nixpkgs/nixos/modules/services/desktops/espanso.nix @@ -12,7 +12,6 @@ in { config = mkIf cfg.enable { systemd.user.services.espanso = { description = "Espanso daemon"; - path = with pkgs; [ espanso libnotify xclip ]; serviceConfig = { ExecStart = "${pkgs.espanso}/bin/espanso daemon"; Restart = "on-failure"; diff --git a/third_party/nixpkgs/nixos/modules/services/desktops/pipewire/pipewire.conf.json b/third_party/nixpkgs/nixos/modules/services/desktops/pipewire/pipewire.conf.json index a9330f54f4..a923ab4db2 100644 --- a/third_party/nixpkgs/nixos/modules/services/desktops/pipewire/pipewire.conf.json +++ b/third_party/nixpkgs/nixos/modules/services/desktops/pipewire/pipewire.conf.json @@ -74,7 +74,18 @@ "args": { "factory.name": "support.node.driver", "node.name": "Dummy-Driver", - "priority.driver": 8000 + "node.group": "pipewire.dummy", + "priority.driver": 20000 + } + }, + { + "factory": "spa-node-factory", + "args": { + "factory.name": "support.node.driver", + "node.name": "Freewheel-Driver", + "priority.driver": 19000, + "node.group": "pipewire.freewheel", + "node.freewheel": true } } ], diff --git a/third_party/nixpkgs/nixos/modules/services/games/terraria.nix b/third_party/nixpkgs/nixos/modules/services/games/terraria.nix index 9e8e5ae875..7312c7e6b6 100644 --- a/third_party/nixpkgs/nixos/modules/services/games/terraria.nix +++ b/third_party/nixpkgs/nixos/modules/services/games/terraria.nix @@ -42,7 +42,7 @@ in }; port = mkOption { - type = types.int; + type = types.port; default = 7777; description = '' Specifies the port to listen on. @@ -50,7 +50,7 @@ in }; maxPlayers = mkOption { - type = types.int; + type = types.ints.u8; default = 255; description = '' Sets the max number of players (between 1 and 255). diff --git a/third_party/nixpkgs/nixos/modules/services/hardware/actkbd.nix b/third_party/nixpkgs/nixos/modules/services/hardware/actkbd.nix index daa407ca1f..f7770f85da 100644 --- a/third_party/nixpkgs/nixos/modules/services/hardware/actkbd.nix +++ b/third_party/nixpkgs/nixos/modules/services/hardware/actkbd.nix @@ -75,7 +75,7 @@ in type = types.listOf (types.submodule bindingCfg); default = []; example = lib.literalExample '' - [ { keys = [ 113 ]; events = [ "key" ]; command = "''${pkgs.alsaUtils}/bin/amixer -q set Master toggle"; } + [ { keys = [ 113 ]; events = [ "key" ]; command = "''${pkgs.alsa-utils}/bin/amixer -q set Master toggle"; } ] ''; description = '' diff --git a/third_party/nixpkgs/nixos/modules/services/hardware/auto-cpufreq.nix b/third_party/nixpkgs/nixos/modules/services/hardware/auto-cpufreq.nix index 72c4eccaff..f846476b30 100644 --- a/third_party/nixpkgs/nixos/modules/services/hardware/auto-cpufreq.nix +++ b/third_party/nixpkgs/nixos/modules/services/hardware/auto-cpufreq.nix @@ -12,7 +12,13 @@ in { config = mkIf cfg.enable { environment.systemPackages = [ pkgs.auto-cpufreq ]; - systemd.packages = [ pkgs.auto-cpufreq ]; - systemd.services.auto-cpufreq.path = with pkgs; [ bash coreutils ]; + systemd = { + packages = [ pkgs.auto-cpufreq ]; + services.auto-cpufreq = { + # Workaround for https://github.com/NixOS/nixpkgs/issues/81138 + wantedBy = [ "multi-user.target" ]; + path = with pkgs; [ bash coreutils ]; + }; + }; }; } diff --git a/third_party/nixpkgs/nixos/modules/services/misc/bees.nix b/third_party/nixpkgs/nixos/modules/services/misc/bees.nix index b0ed2d5c28..6b8cae8464 100644 --- a/third_party/nixpkgs/nixos/modules/services/misc/bees.nix +++ b/third_party/nixpkgs/nixos/modules/services/misc/bees.nix @@ -57,7 +57,7 @@ let }; options.extraOptions = mkOption { type = listOf str; - default = []; + default = [ ]; description = '' Extra command-line options passed to the daemon. See upstream bees documentation. ''; @@ -67,7 +67,8 @@ let }; }; -in { +in +{ options.services.beesd = { filesystems = mkOption { @@ -87,37 +88,42 @@ in { }; }; config = { - systemd.services = mapAttrs' (name: fs: nameValuePair "beesd@${name}" { - description = "Block-level BTRFS deduplication for %i"; - after = [ "sysinit.target" ]; + systemd.services = mapAttrs' + (name: fs: nameValuePair "beesd@${name}" { + description = "Block-level BTRFS deduplication for %i"; + after = [ "sysinit.target" ]; - serviceConfig = let - configOpts = [ - fs.spec - "verbosity=${toString fs.verbosity}" - "idxSizeMB=${toString fs.hashTableSizeMB}" - "workDir=${fs.workDir}" - ]; - configOptsStr = escapeShellArgs configOpts; - in { - # Values from https://github.com/Zygo/bees/blob/v0.6.1/scripts/beesd%40.service.in - ExecStart = "${pkgs.bees}/bin/bees-service-wrapper run ${configOptsStr} -- --no-timestamps ${escapeShellArgs fs.extraOptions}"; - ExecStopPost = "${pkgs.bees}/bin/bees-service-wrapper cleanup ${configOptsStr}"; - CPUAccounting = true; - CPUWeight = 12; - IOSchedulingClass = "idle"; - IOSchedulingPriority = 7; - IOWeight = 10; - KillMode = "control-group"; - KillSignal = "SIGTERM"; - MemoryAccounting = true; - Nice = 19; - Restart = "on-abnormal"; - StartupCPUWeight = 25; - StartupIOWeight = 25; - SyslogIdentifier = "bees"; # would otherwise be "bees-service-wrapper" - }; - wantedBy = ["multi-user.target"]; - }) cfg.filesystems; + serviceConfig = + let + configOpts = [ + fs.spec + "verbosity=${toString fs.verbosity}" + "idxSizeMB=${toString fs.hashTableSizeMB}" + "workDir=${fs.workDir}" + ]; + configOptsStr = escapeShellArgs configOpts; + in + { + # Values from https://github.com/Zygo/bees/blob/v0.6.5/scripts/beesd@.service.in + ExecStart = "${pkgs.bees}/bin/bees-service-wrapper run ${configOptsStr} -- --no-timestamps ${escapeShellArgs fs.extraOptions}"; + ExecStopPost = "${pkgs.bees}/bin/bees-service-wrapper cleanup ${configOptsStr}"; + CPUAccounting = true; + CPUSchedulingPolicy = "batch"; + CPUWeight = 12; + IOSchedulingClass = "idle"; + IOSchedulingPriority = 7; + IOWeight = 10; + KillMode = "control-group"; + KillSignal = "SIGTERM"; + MemoryAccounting = true; + Nice = 19; + Restart = "on-abnormal"; + StartupCPUWeight = 25; + StartupIOWeight = 25; + SyslogIdentifier = "beesd"; # would otherwise be "bees-service-wrapper" + }; + wantedBy = [ "multi-user.target" ]; + }) + cfg.filesystems; }; } diff --git a/third_party/nixpkgs/nixos/modules/services/misc/etcd.nix b/third_party/nixpkgs/nixos/modules/services/misc/etcd.nix index 32360d4376..eb266f043e 100644 --- a/third_party/nixpkgs/nixos/modules/services/misc/etcd.nix +++ b/third_party/nixpkgs/nixos/modules/services/misc/etcd.nix @@ -184,7 +184,7 @@ in { }; }; - environment.systemPackages = [ pkgs.etcdctl ]; + environment.systemPackages = [ pkgs.etcd ]; users.users.etcd = { uid = config.ids.uids.etcd; diff --git a/third_party/nixpkgs/nixos/modules/services/misc/gitlab.nix b/third_party/nixpkgs/nixos/modules/services/misc/gitlab.nix index 253d87537c..237c20e4b7 100644 --- a/third_party/nixpkgs/nixos/modules/services/misc/gitlab.nix +++ b/third_party/nixpkgs/nixos/modules/services/misc/gitlab.nix @@ -10,7 +10,7 @@ let postgresqlPackage = if config.services.postgresql.enable then config.services.postgresql.package else - pkgs.postgresql; + pkgs.postgresql_12; gitlabSocket = "${cfg.statePath}/tmp/sockets/gitlab.socket"; gitalySocket = "${cfg.statePath}/tmp/sockets/gitaly.socket"; @@ -145,7 +145,7 @@ let }; }; - gitlabEnv = { + gitlabEnv = cfg.packages.gitlab.gitlabEnv // { HOME = "${cfg.statePath}/home"; PUMA_PATH = "${cfg.statePath}/"; GITLAB_PATH = "${cfg.packages.gitlab}/share/gitlab/"; @@ -462,7 +462,7 @@ in { }; port = mkOption { - type = types.int; + type = types.port; default = 8080; description = '' GitLab server port for copy-paste URLs, e.g. 80 or 443 if you're @@ -841,6 +841,10 @@ in { assertion = cfg.secrets.jwsFile != null; message = "services.gitlab.secrets.jwsFile must be set!"; } + { + assertion = versionAtLeast postgresqlPackage.version "12.0.0"; + message = "PostgreSQL >=12 is required to run GitLab 14."; + } ]; environment.systemPackages = [ pkgs.git gitlab-rake gitlab-rails cfg.packages.gitlab-shell ]; diff --git a/third_party/nixpkgs/nixos/modules/services/misc/home-assistant.nix b/third_party/nixpkgs/nixos/modules/services/misc/home-assistant.nix index 1e33381de2..d68d7b05c1 100644 --- a/third_party/nixpkgs/nixos/modules/services/misc/home-assistant.nix +++ b/third_party/nixpkgs/nixos/modules/services/misc/home-assistant.nix @@ -66,7 +66,9 @@ in { meta.maintainers = teams.home-assistant.members; options.services.home-assistant = { - enable = mkEnableOption "Home Assistant"; + # Running home-assistant on NixOS is considered an installation method that is unsupported by the upstream project. + # https://github.com/home-assistant/architecture/blob/master/adr/0012-define-supported-installation-method.md#decision + enable = mkEnableOption "Home Assistant. Please note that this installation method is unsupported upstream"; configDir = mkOption { default = "/var/lib/hass"; @@ -266,6 +268,52 @@ in { "CAP_NET_BIND_SERVICE" "CAP_NET_RAW" ])); + componentsUsingBluetooth = [ + # Components that require the AF_BLUETOOTH address family + "bluetooth_tracker" + "bluetooth_le_tracker" + ]; + componentsUsingSerialDevices = [ + # Components that require access to serial devices (/dev/tty*) + # List generated from home-assistant documentation: + # git clone https://github.com/home-assistant/home-assistant.io/ + # cd source/_integrations + # rg "/dev/tty" -l | cut -d'/' -f3 | cut -d'.' -f1 | sort + # And then extended by references found in the source code, these + # mostly the ones using config flows already. + "acer_projector" + "alarmdecoder" + "arduino" + "blackbird" + "dsmr" + "edl21" + "elkm1" + "elv" + "enocean" + "firmata" + "flexit" + "gpsd" + "insteon" + "kwb" + "lacrosse" + "mhz19" + "modbus" + "modem_callerid" + "mysensors" + "nad" + "numato" + "rflink" + "rfxtrx" + "scsgate" + "serial" + "serial_pm" + "sms" + "upb" + "velbus" + "w800rf32" + "xbee" + "zha" + ]; in { ExecStart = "${package}/bin/hass --runner --config '${cfg.configDir}'"; ExecReload = "${pkgs.coreutils}/bin/kill -HUP $MAINPID"; @@ -279,11 +327,11 @@ in { # Hardening AmbientCapabilities = capabilities; CapabilityBoundingSet = capabilities; - DeviceAllow = [ + DeviceAllow = (optionals (any useComponent componentsUsingSerialDevices) [ "char-ttyACM rw" "char-ttyAMA rw" "char-ttyUSB rw" - ]; + ]); DevicePolicy = "closed"; LockPersonality = true; MemoryDenyWriteExecute = true; @@ -312,13 +360,15 @@ in { "AF_INET6" "AF_NETLINK" "AF_UNIX" - ] ++ optionals (useComponent "bluetooth_tracker" || useComponent "bluetooth_le_tracker") [ + ] ++ optionals (any useComponent componentsUsingBluetooth) [ "AF_BLUETOOTH" ]; RestrictNamespaces = true; RestrictRealtime = true; RestrictSUIDSGID = true; - SupplementaryGroups = [ "dialout" ]; + SupplementaryGroups = optionals (any useComponent componentsUsingSerialDevices) [ + "dialout" + ]; SystemCallArchitectures = "native"; SystemCallFilter = [ "@system-service" diff --git a/third_party/nixpkgs/nixos/modules/services/misc/matrix-synapse.nix b/third_party/nixpkgs/nixos/modules/services/misc/matrix-synapse.nix index dff5874530..3c734a9481 100644 --- a/third_party/nixpkgs/nixos/modules/services/misc/matrix-synapse.nix +++ b/third_party/nixpkgs/nixos/modules/services/misc/matrix-synapse.nix @@ -143,6 +143,13 @@ in { List of additional Matrix plugins to make available. ''; }; + withJemalloc = mkOption { + type = types.bool; + default = false; + description = '' + Whether to preload jemalloc to reduce memory fragmentation and overall usage. + ''; + }; no_tls = mkOption { type = types.bool; default = false; @@ -231,7 +238,7 @@ in { type = types.listOf (types.submodule { options = { port = mkOption { - type = types.int; + type = types.port; example = 8448; description = '' The port to listen for HTTP(S) requests on. @@ -720,7 +727,11 @@ in { --keys-directory ${cfg.dataDir} \ --generate-keys ''; - environment.PYTHONPATH = makeSearchPathOutput "lib" cfg.package.python.sitePackages [ pluginsEnv ]; + environment = { + PYTHONPATH = makeSearchPathOutput "lib" cfg.package.python.sitePackages [ pluginsEnv ]; + } // optionalAttrs (cfg.withJemalloc) { + LD_PRELOAD = "${pkgs.jemalloc}/lib/libjemalloc.so"; + }; serviceConfig = { Type = "notify"; User = "matrix-synapse"; diff --git a/third_party/nixpkgs/nixos/modules/services/misc/sourcehut/builds.nix b/third_party/nixpkgs/nixos/modules/services/misc/sourcehut/builds.nix index e228665784..a17a1010db 100644 --- a/third_party/nixpkgs/nixos/modules/services/misc/sourcehut/builds.nix +++ b/third_party/nixpkgs/nixos/modules/services/misc/sourcehut/builds.nix @@ -48,7 +48,6 @@ in default = false; description = '' Run workers for builds.sr.ht. - Perform manually on machine: `cd ${scfg.statePath}/images; docker build -t qemu -f qemu/Dockerfile .` ''; }; @@ -161,6 +160,21 @@ in partOf = [ "buildsrht.service" ]; description = "builds.sr.ht worker service"; path = [ pkgs.openssh pkgs.docker ]; + preStart = let qemuPackage = pkgs.qemu_kvm; + in '' + if [[ "$(docker images -q qemu:latest 2> /dev/null)" == "" || "$(cat ${statePath}/docker-image-qemu 2> /dev/null || true)" != "${qemuPackage.version}" ]]; then + # Create and import qemu:latest image for docker + ${ + pkgs.dockerTools.streamLayeredImage { + name = "qemu"; + tag = "latest"; + contents = [ qemuPackage ]; + } + } | docker load + # Mark down current package version + printf "%s" "${qemuPackage.version}" > ${statePath}/docker-image-qemu + fi + ''; serviceConfig = { Type = "simple"; User = user; diff --git a/third_party/nixpkgs/nixos/modules/services/misc/synergy.nix b/third_party/nixpkgs/nixos/modules/services/misc/synergy.nix index 7990a9f6f4..d6cd5d7f0d 100644 --- a/third_party/nixpkgs/nixos/modules/services/misc/synergy.nix +++ b/third_party/nixpkgs/nixos/modules/services/misc/synergy.nix @@ -70,6 +70,26 @@ in type = types.bool; description = "Whether the Synergy server should be started automatically."; }; + tls = { + enable = mkOption { + type = types.bool; + default = false; + description = '' + Whether TLS encryption should be used. + + Using this requires a TLS certificate that can be + generated by starting the Synergy GUI once and entering + a valid product key. + ''; + }; + + cert = mkOption { + type = types.nullOr types.str; + default = null; + example = "~/.synergy/SSL/Synergy.pem"; + description = "The TLS certificate to use for encryption."; + }; + }; }; }; @@ -95,7 +115,7 @@ in description = "Synergy server"; wantedBy = optional cfgS.autoStart "graphical-session.target"; path = [ pkgs.synergy ]; - serviceConfig.ExecStart = ''${pkgs.synergy}/bin/synergys -c ${cfgS.configFile} -f ${optionalString (cfgS.address != "") "-a ${cfgS.address}"} ${optionalString (cfgS.screenName != "") "-n ${cfgS.screenName}" }''; + serviceConfig.ExecStart = ''${pkgs.synergy}/bin/synergys -c ${cfgS.configFile} -f${optionalString (cfgS.address != "") " -a ${cfgS.address}"}${optionalString (cfgS.screenName != "") " -n ${cfgS.screenName}"}${optionalString cfgS.tls.enable " --enable-crypto"}${optionalString (cfgS.tls.cert != null) (" --tls-cert=${cfgS.tls.cert}")}''; serviceConfig.Restart = "on-failure"; }; }) diff --git a/third_party/nixpkgs/nixos/modules/services/monitoring/grafana.nix b/third_party/nixpkgs/nixos/modules/services/monitoring/grafana.nix index 4ebde6f9b1..c3e1f72945 100644 --- a/third_party/nixpkgs/nixos/modules/services/monitoring/grafana.nix +++ b/third_party/nixpkgs/nixos/modules/services/monitoring/grafana.nix @@ -94,7 +94,7 @@ let description = "Name of the datasource. Required."; }; type = mkOption { - type = types.enum ["graphite" "prometheus" "cloudwatch" "elasticsearch" "influxdb" "opentsdb" "mysql" "mssql" "postgres" "loki"]; + type = types.str; description = "Datasource type. Required."; }; access = mkOption { @@ -337,11 +337,16 @@ in { defaultText = "pkgs.grafana"; type = types.package; }; + declarativePlugins = mkOption { type = with types; nullOr (listOf path); default = null; description = "If non-null, then a list of packages containing Grafana plugins to install. If set, plugins cannot be manually installed."; example = literalExample "with pkgs.grafanaPlugins; [ grafana-piechart-panel ]"; + # Make sure each plugin is added only once; otherwise building + # the link farm fails, since the same path is added multiple + # times. + apply = x: if isList x then lib.unique x else x; }; dataDir = mkOption { @@ -635,20 +640,28 @@ in { QT_QPA_PLATFORM = "offscreen"; } // mapAttrs' (n: v: nameValuePair "GF_${n}" (toString v)) envOptions; script = '' + set -o errexit -o pipefail -o nounset -o errtrace + shopt -s inherit_errexit + ${optionalString (cfg.auth.google.clientSecretFile != null) '' - export GF_AUTH_GOOGLE_CLIENT_SECRET="$(cat ${escapeShellArg cfg.auth.google.clientSecretFile})" + GF_AUTH_GOOGLE_CLIENT_SECRET="$(<${escapeShellArg cfg.auth.google.clientSecretFile})" + export GF_AUTH_GOOGLE_CLIENT_SECRET ''} ${optionalString (cfg.database.passwordFile != null) '' - export GF_DATABASE_PASSWORD="$(cat ${escapeShellArg cfg.database.passwordFile})" + GF_DATABASE_PASSWORD="$(<${escapeShellArg cfg.database.passwordFile})" + export GF_DATABASE_PASSWORD ''} ${optionalString (cfg.security.adminPasswordFile != null) '' - export GF_SECURITY_ADMIN_PASSWORD="$(cat ${escapeShellArg cfg.security.adminPasswordFile})" + GF_SECURITY_ADMIN_PASSWORD="$(<${escapeShellArg cfg.security.adminPasswordFile})" + export GF_SECURITY_ADMIN_PASSWORD ''} ${optionalString (cfg.security.secretKeyFile != null) '' - export GF_SECURITY_SECRET_KEY="$(cat ${escapeShellArg cfg.security.secretKeyFile})" + GF_SECURITY_SECRET_KEY="$(<${escapeShellArg cfg.security.secretKeyFile})" + export GF_SECURITY_SECRET_KEY ''} ${optionalString (cfg.smtp.passwordFile != null) '' - export GF_SMTP_PASSWORD="$(cat ${escapeShellArg cfg.smtp.passwordFile})" + GF_SMTP_PASSWORD="$(<${escapeShellArg cfg.smtp.passwordFile})" + export GF_SMTP_PASSWORD ''} ${optionalString cfg.provision.enable '' export GF_PATHS_PROVISIONING=${provisionConfDir}; diff --git a/third_party/nixpkgs/nixos/modules/services/monitoring/metricbeat.nix b/third_party/nixpkgs/nixos/modules/services/monitoring/metricbeat.nix new file mode 100644 index 0000000000..b285559eaa --- /dev/null +++ b/third_party/nixpkgs/nixos/modules/services/monitoring/metricbeat.nix @@ -0,0 +1,152 @@ +{ config, lib, pkgs, ... }: + +let + inherit (lib) + attrValues + literalExample + mkEnableOption + mkIf + mkOption + types + ; + cfg = config.services.metricbeat; + + settingsFormat = pkgs.formats.yaml {}; + +in +{ + options = { + + services.metricbeat = { + + enable = mkEnableOption "metricbeat"; + + package = mkOption { + type = types.package; + default = pkgs.metricbeat; + defaultText = literalExample "pkgs.metricbeat"; + example = literalExample "pkgs.metricbeat7"; + description = '' + The metricbeat package to use + ''; + }; + + modules = mkOption { + description = '' + Metricbeat modules are responsible for reading metrics from the various sources. + + This is like services.metricbeat.settings.metricbeat.modules, + but structured as an attribute set. This has the benefit that multiple + NixOS modules can contribute settings to a single metricbeat module. + + A module can be specified multiple times by choosing a different <name> + for each, but setting to the same value. + + See . + ''; + default = {}; + type = types.attrsOf (types.submodule ({ name, ... }: { + freeformType = settingsFormat.type; + options = { + module = mkOption { + type = types.str; + default = name; + defaultText = literalExample ''''; + description = '' + The name of the module. + + Look for the value after module: on the individual + module pages linked from . + ''; + }; + }; + })); + example = { + system = { + metricsets = ["cpu" "load" "memory" "network" "process" "process_summary" "uptime" "socket_summary"]; + enabled = true; + period = "10s"; + processes = [".*"]; + cpu.metrics = ["percentages" "normalized_percentages"]; + core.metrics = ["percentages"]; + }; + }; + }; + + settings = mkOption { + type = types.submodule { + freeformType = settingsFormat.type; + options = { + + name = mkOption { + type = types.str; + default = ""; + description = '' + Name of the beat. Defaults to the hostname. + See . + ''; + }; + + tags = mkOption { + type = types.listOf types.str; + default = []; + description = '' + Tags to place on the shipped metrics. + See . + ''; + }; + + metricbeat.modules = mkOption { + type = types.listOf settingsFormat.type; + default = []; + internal = true; + description = '' + The metric collecting modules. Use instead. + + See . + ''; + }; + }; + }; + default = {}; + description = '' + Configuration for metricbeat. See for supported values. + ''; + }; + + }; + }; + + config = mkIf cfg.enable { + + assertions = [ + { + # empty modules would cause a failure at runtime + assertion = cfg.settings.metricbeat.modules != []; + message = "services.metricbeat: You must configure one or more modules."; + } + ]; + + services.metricbeat.settings.metricbeat.modules = attrValues cfg.modules; + + systemd.services.metricbeat = { + description = "metricbeat metrics shipper"; + wantedBy = [ "multi-user.target" ]; + serviceConfig = { + ExecStart = '' + ${cfg.package}/bin/metricbeat \ + -c ${settingsFormat.generate "metricbeat.yml" cfg.settings} \ + --path.data $STATE_DIRECTORY \ + --path.logs $LOGS_DIRECTORY \ + ; + ''; + Restart = "always"; + DynamicUser = true; + ProtectSystem = "strict"; + ProtectHome = "tmpfs"; + StateDirectory = "metricbeat"; + LogsDirectory = "metricbeat"; + }; + }; + }; +} diff --git a/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/default.nix b/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/default.nix index e08f23d8eb..8fe689ef3d 100644 --- a/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/default.nix +++ b/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/default.nix @@ -945,6 +945,7 @@ in { RuntimeDirectoryMode = "0700"; WorkingDirectory = workingDir; StateDirectory = cfg.stateDir; + StateDirectoryMode = "0700"; }; }; }; diff --git a/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/exporters.nix b/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/exporters.nix index 212ba06ef7..46015c9ec1 100644 --- a/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/exporters.nix +++ b/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/exporters.nix @@ -56,6 +56,7 @@ let "redis" "rspamd" "rtl_433" + "script" "snmp" "smokeping" "sql" diff --git a/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/exporters/script.nix b/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/exporters/script.nix new file mode 100644 index 0000000000..104ab859f2 --- /dev/null +++ b/third_party/nixpkgs/nixos/modules/services/monitoring/prometheus/exporters/script.nix @@ -0,0 +1,64 @@ +{ config, lib, pkgs, options }: + +with lib; + +let + cfg = config.services.prometheus.exporters.script; + configFile = pkgs.writeText "script-exporter.yaml" (builtins.toJSON cfg.settings); +in +{ + port = 9172; + extraOpts = { + settings.scripts = mkOption { + type = with types; listOf (submodule { + options = { + name = mkOption { + type = str; + example = "sleep"; + description = "Name of the script."; + }; + script = mkOption { + type = str; + example = "sleep 5"; + description = "Shell script to execute when metrics are requested."; + }; + timeout = mkOption { + type = nullOr int; + default = null; + example = 60; + description = "Optional timeout for the script in seconds."; + }; + }; + }); + example = literalExample '' + { + scripts = [ + { name = "sleep"; script = "sleep 5"; } + ]; + } + ''; + description = '' + All settings expressed as an Nix attrset. + + Check the official documentation for the corresponding YAML + settings that can all be used here: + ''; + }; + }; + serviceOpts = { + serviceConfig = { + ExecStart = '' + ${pkgs.prometheus-script-exporter}/bin/script_exporter \ + --web.listen-address ${cfg.listenAddress}:${toString cfg.port} \ + --config.file ${configFile} \ + ${concatStringsSep " \\\n " cfg.extraFlags} + ''; + NoNewPrivileges = true; + ProtectHome = true; + ProtectSystem = "strict"; + ProtectKernelTunables = true; + ProtectKernelModules = true; + ProtectControlGroups = true; + }; + }; +} diff --git a/third_party/nixpkgs/nixos/modules/services/monitoring/zabbix-agent.nix b/third_party/nixpkgs/nixos/modules/services/monitoring/zabbix-agent.nix index e7dd9e3393..7eb6449e38 100644 --- a/third_party/nixpkgs/nixos/modules/services/monitoring/zabbix-agent.nix +++ b/third_party/nixpkgs/nixos/modules/services/monitoring/zabbix-agent.nix @@ -157,7 +157,10 @@ in wantedBy = [ "multi-user.target" ]; - path = [ "/run/wrappers" ] ++ cfg.extraPackages; + # https://www.zabbix.com/documentation/current/manual/config/items/userparameters + # > User parameters are commands executed by Zabbix agent. + # > /bin/sh is used as a command line interpreter under UNIX operating systems. + path = with pkgs; [ bash "/run/wrappers" ] ++ cfg.extraPackages; serviceConfig = { ExecStart = "@${cfg.package}/sbin/zabbix_agentd zabbix_agentd -f --config ${configFile}"; diff --git a/third_party/nixpkgs/nixos/modules/services/network-filesystems/davfs2.nix b/third_party/nixpkgs/nixos/modules/services/network-filesystems/davfs2.nix index 4b6f85e4a2..8cf314fe63 100644 --- a/third_party/nixpkgs/nixos/modules/services/network-filesystems/davfs2.nix +++ b/third_party/nixpkgs/nixos/modules/services/network-filesystems/davfs2.nix @@ -70,6 +70,24 @@ in }; }; + security.wrappers."mount.davfs" = { + program = "mount.davfs"; + source = "${pkgs.davfs2}/bin/mount.davfs"; + owner = "root"; + group = cfg.davGroup; + setuid = true; + permissions = "u+rx,g+x"; + }; + + security.wrappers."umount.davfs" = { + program = "umount.davfs"; + source = "${pkgs.davfs2}/bin/umount.davfs"; + owner = "root"; + group = cfg.davGroup; + setuid = true; + permissions = "u+rx,g+x"; + }; + }; } diff --git a/third_party/nixpkgs/nixos/modules/services/networking/babeld.nix b/third_party/nixpkgs/nixos/modules/services/networking/babeld.nix index 5e14283179..aae6f1498a 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/babeld.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/babeld.nix @@ -104,6 +104,7 @@ in ExecStart = "${pkgs.babeld}/bin/babeld -c ${configFile} -I /run/babeld/babeld.pid -S /var/lib/babeld/state"; AmbientCapabilities = [ "CAP_NET_ADMIN" ]; CapabilityBoundingSet = [ "CAP_NET_ADMIN" ]; + DevicePolicy = "closed"; DynamicUser = true; IPAddressAllow = [ "fe80::/64" "ff00::/8" "::1/128" "127.0.0.0/8" ]; IPAddressDeny = "any"; @@ -123,12 +124,17 @@ in RemoveIPC = true; ProtectHome = true; ProtectHostname = true; + ProtectProc = "invisible"; PrivateMounts = true; PrivateTmp = true; PrivateDevices = true; PrivateUsers = false; # kernel_route(ADD): Operation not permitted + ProcSubset = "pid"; SystemCallArchitectures = "native"; - SystemCallFilter = [ "@system-service" ]; + SystemCallFilter = [ + "@system-service" + "~@privileged @resources" + ]; UMask = "0177"; RuntimeDirectory = "babeld"; StateDirectory = "babeld"; diff --git a/third_party/nixpkgs/nixos/modules/services/networking/firefox/sync-server.nix b/third_party/nixpkgs/nixos/modules/services/networking/firefox/sync-server.nix index 6842aa7356..24f7686495 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/firefox/sync-server.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/firefox/sync-server.nix @@ -67,7 +67,7 @@ in }; listen.port = mkOption { - type = types.int; + type = types.port; default = 5000; description = '' Port on which the sync server listen to. diff --git a/third_party/nixpkgs/nixos/modules/services/networking/gale.nix b/third_party/nixpkgs/nixos/modules/services/networking/gale.nix deleted file mode 100644 index cb954fd836..0000000000 --- a/third_party/nixpkgs/nixos/modules/services/networking/gale.nix +++ /dev/null @@ -1,181 +0,0 @@ -{ config, lib, pkgs, ... }: - -with lib; - -let - cfg = config.services.gale; - # we convert the path to a string to avoid it being copied to the nix store, - # otherwise users could read the private key as all files in the store are - # world-readable - keyPath = toString cfg.keyPath; - # ...but we refer to the pubkey file using a path so that we can ensure the - # config gets rebuilt if the public key changes (we can assume the private key - # will never change without the public key having changed) - gpubFile = cfg.keyPath + "/${cfg.domain}.gpub"; - home = "/var/lib/gale"; - keysPrepared = cfg.keyPath != null && lib.pathExists cfg.keyPath; -in -{ - options = { - services.gale = { - enable = mkEnableOption "the Gale messaging daemon"; - - user = mkOption { - default = "gale"; - type = types.str; - description = "Username for the Gale daemon."; - }; - - group = mkOption { - default = "gale"; - type = types.str; - description = "Group name for the Gale daemon."; - }; - - setuidWrapper = mkOption { - default = null; - description = "Configuration for the Gale gksign setuid wrapper."; - }; - - domain = mkOption { - default = ""; - type = types.str; - description = "Domain name for the Gale system."; - }; - - keyPath = mkOption { - default = null; - type = types.nullOr types.path; - description = '' - Directory containing the key pair for this Gale domain. The expected - filename will be taken from the domain option with ".gpri" and ".gpub" - appended. - ''; - }; - - extraConfig = mkOption { - type = types.lines; - default = ""; - description = '' - Additional text to be added to /etc/gale/conf. - ''; - }; - }; - }; - - config = mkMerge [ - (mkIf cfg.enable { - assertions = [{ - assertion = cfg.domain != ""; - message = "A domain must be set for Gale."; - }]; - - warnings = mkIf (!keysPrepared) [ - "You must run gale-install in order to generate a domain key." - ]; - - system.activationScripts.gale = mkIf cfg.enable ( - stringAfter [ "users" "groups" ] '' - chmod 755 ${home} - mkdir -m 0777 -p ${home}/auth/cache - mkdir -m 1777 -p ${home}/auth/local # GALE_DOMAIN.gpub - mkdir -m 0700 -p ${home}/auth/private # ROOT.gpub - mkdir -m 0755 -p ${home}/auth/trusted # ROOT - mkdir -m 0700 -p ${home}/.gale - mkdir -m 0700 -p ${home}/.gale/auth - mkdir -m 0700 -p ${home}/.gale/auth/private # GALE_DOMAIN.gpri - - ln -sf ${pkgs.gale}/etc/gale/auth/trusted/ROOT "${home}/auth/trusted/ROOT" - chown ${cfg.user}:${cfg.group} ${home} ${home}/auth ${home}/auth/* - chown ${cfg.user}:${cfg.group} ${home}/.gale ${home}/.gale/auth ${home}/.gale/auth/private - '' - ); - - environment = { - etc = { - "gale/auth".source = home + "/auth"; # symlink /var/lib/gale/auth - "gale/conf".text = '' - GALE_USER ${cfg.user} - GALE_DOMAIN ${cfg.domain} - ${cfg.extraConfig} - ''; - }; - - systemPackages = [ pkgs.gale ]; - }; - - users.users.${cfg.user} = { - description = "Gale daemon"; - uid = config.ids.uids.gale; - group = cfg.group; - home = home; - createHome = true; - }; - - users.groups = [{ - name = cfg.group; - gid = config.ids.gids.gale; - }]; - }) - (mkIf (cfg.enable && keysPrepared) { - assertions = [ - { - assertion = cfg.keyPath != null - && lib.pathExists (cfg.keyPath + "/${cfg.domain}.gpub"); - message = "Couldn't find a Gale public key for ${cfg.domain}."; - } - { - assertion = cfg.keyPath != null - && lib.pathExists (cfg.keyPath + "/${cfg.domain}.gpri"); - message = "Couldn't find a Gale private key for ${cfg.domain}."; - } - ]; - - services.gale.setuidWrapper = { - program = "gksign"; - source = "${pkgs.gale}/bin/gksign"; - owner = cfg.user; - group = cfg.group; - setuid = true; - setgid = false; - }; - - security.wrappers.gksign = cfg.setuidWrapper; - - systemd.services.gale-galed = { - description = "Gale messaging daemon"; - wantedBy = [ "multi-user.target" ]; - wants = [ "gale-gdomain.service" ]; - after = [ "network.target" ]; - - preStart = '' - install -m 0640 -o ${cfg.user} -g ${cfg.group} ${keyPath}/${cfg.domain}.gpri "${home}/.gale/auth/private/" - install -m 0644 -o ${cfg.user} -g ${cfg.group} ${gpubFile} "${home}/.gale/auth/private/${cfg.domain}.gpub" - install -m 0644 -o ${cfg.user} -g ${cfg.group} ${gpubFile} "${home}/auth/local/${cfg.domain}.gpub" - ''; - - serviceConfig = { - Type = "forking"; - ExecStart = "@${pkgs.gale}/bin/galed galed"; - User = cfg.user; - Group = cfg.group; - PermissionsStartOnly = true; - }; - }; - - systemd.services.gale-gdomain = { - description = "Gale AKD daemon"; - wantedBy = [ "multi-user.target" ]; - requires = [ "gale-galed.service" ]; - after = [ "gale-galed.service" ]; - - serviceConfig = { - Type = "forking"; - ExecStart = "@${pkgs.gale}/bin/gdomain gdomain"; - User = cfg.user; - Group = cfg.group; - }; - }; - }) - ]; -} diff --git a/third_party/nixpkgs/nixos/modules/services/networking/git-daemon.nix b/third_party/nixpkgs/nixos/modules/services/networking/git-daemon.nix index 52c895215f..98f80dd4bc 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/git-daemon.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/git-daemon.nix @@ -74,7 +74,7 @@ in }; port = mkOption { - type = types.int; + type = types.port; default = 9418; description = "Port to listen on."; }; diff --git a/third_party/nixpkgs/nixos/modules/services/networking/globalprotect-vpn.nix b/third_party/nixpkgs/nixos/modules/services/networking/globalprotect-vpn.nix new file mode 100644 index 0000000000..367a42687e --- /dev/null +++ b/third_party/nixpkgs/nixos/modules/services/networking/globalprotect-vpn.nix @@ -0,0 +1,43 @@ +{ config, lib, pkgs, ... }: + +with lib; + +let + cfg = config.services.globalprotect; + + execStart = if cfg.csdWrapper == null then + "${pkgs.globalprotect-openconnect}/bin/gpservice" + else + "${pkgs.globalprotect-openconnect}/bin/gpservice --csd-wrapper=${cfg.csdWrapper}"; +in + +{ + options.services.globalprotect = { + enable = mkEnableOption "globalprotect"; + + csdWrapper = mkOption { + description = '' + A script that will produce a Host Integrity Protection (HIP) report, + as described at + ''; + default = null; + example = literalExample "\${pkgs.openconnect}/libexec/openconnect/hipreport.sh"; + type = types.nullOr types.path; + }; + }; + + config = mkIf cfg.enable { + services.dbus.packages = [ pkgs.globalprotect-openconnect ]; + + systemd.services.gpservice = { + description = "GlobalProtect openconnect DBus service"; + serviceConfig = { + Type="dbus"; + BusName="com.yuezk.qt.GPService"; + ExecStart=execStart; + }; + wantedBy = [ "multi-user.target" ]; + after = [ "network.target" ]; + }; + }; +} diff --git a/third_party/nixpkgs/nixos/modules/services/networking/go-neb.nix b/third_party/nixpkgs/nixos/modules/services/networking/go-neb.nix index 991ae38f30..765834fad8 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/go-neb.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/go-neb.nix @@ -5,7 +5,8 @@ with lib; let cfg = config.services.go-neb; - configFile = pkgs.writeText "config.yml" (builtins.toJSON cfg.config); + settingsFormat = pkgs.formats.yaml {}; + configFile = settingsFormat.generate "config.yaml" cfg.config; in { options.services.go-neb = { enable = mkEnableOption "Extensible matrix bot written in Go"; @@ -16,13 +17,26 @@ in { default = ":4050"; }; + secretFile = mkOption { + type = types.nullOr types.path; + default = null; + example = "/run/keys/go-neb.env"; + description = '' + Environment variables from this file will be interpolated into the + final config file using envsubst with this syntax: $ENVIRONMENT + or ''${VARIABLE}. + The file should contain lines formatted as SECRET_VAR=SECRET_VALUE. + This is useful to avoid putting secrets into the nix store. + ''; + }; + baseUrl = mkOption { type = types.str; description = "Public-facing endpoint that can receive webhooks."; }; config = mkOption { - type = types.uniq types.attrs; + inherit (settingsFormat) type; description = '' Your config.yaml as a Nix attribute set. See config.sample.yaml @@ -32,18 +46,30 @@ in { }; config = mkIf cfg.enable { - systemd.services.go-neb = { + systemd.services.go-neb = let + finalConfigFile = if cfg.secretFile == null then configFile else "/var/run/go-neb/config.yaml"; + in { description = "Extensible matrix bot written in Go"; after = [ "network.target" ]; wantedBy = [ "multi-user.target" ]; environment = { BASE_URL = cfg.baseUrl; BIND_ADDRESS = cfg.bindAddress; - CONFIG_FILE = configFile; + CONFIG_FILE = finalConfigFile; }; serviceConfig = { + ExecStartPre = lib.optional (cfg.secretFile != null) + (pkgs.writeShellScript "pre-start" '' + umask 077 + export $(xargs < ${cfg.secretFile}) + ${pkgs.envsubst}/bin/envsubst -i "${configFile}" > ${finalConfigFile} + chown go-neb ${finalConfigFile} + ''); + PermissionsStartOnly = true; + RuntimeDirectory = "go-neb"; ExecStart = "${pkgs.go-neb}/bin/go-neb"; + User = "go-neb"; DynamicUser = true; }; }; diff --git a/third_party/nixpkgs/nixos/modules/services/networking/monero.nix b/third_party/nixpkgs/nixos/modules/services/networking/monero.nix index 952d1d47ca..9a9084e4ce 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/monero.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/monero.nix @@ -110,7 +110,7 @@ in }; rpc.port = mkOption { - type = types.int; + type = types.port; default = 18081; description = '' Port the RPC server will bind to. diff --git a/third_party/nixpkgs/nixos/modules/services/networking/networkmanager.nix b/third_party/nixpkgs/nixos/modules/services/networking/networkmanager.nix index 135f29be58..064018057c 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/networkmanager.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/networkmanager.nix @@ -22,36 +22,51 @@ let enableIwd = cfg.wifi.backend == "iwd"; - configFile = pkgs.writeText "NetworkManager.conf" '' - [main] - plugins=keyfile - dhcp=${cfg.dhcp} - dns=${cfg.dns} - # If resolvconf is disabled that means that resolv.conf is managed by some other module. - rc-manager=${if config.networking.resolvconf.enable then "resolvconf" else "unmanaged"} + mkValue = v: + if v == true then "yes" + else if v == false then "no" + else if lib.isInt v then toString v + else v; - [keyfile] - ${optionalString (cfg.unmanaged != []) - ''unmanaged-devices=${lib.concatStringsSep ";" cfg.unmanaged}''} - - [logging] - level=${cfg.logLevel} - audit=${lib.boolToString config.security.audit.enable} - - [connection] - ipv6.ip6-privacy=2 - ethernet.cloned-mac-address=${cfg.ethernet.macAddress} - wifi.cloned-mac-address=${cfg.wifi.macAddress} - ${optionalString (cfg.wifi.powersave != null) - ''wifi.powersave=${if cfg.wifi.powersave then "3" else "2"}''} - - [device] - wifi.scan-rand-mac-address=${if cfg.wifi.scanRandMacAddress then "yes" else "no"} - wifi.backend=${cfg.wifi.backend} - - ${cfg.extraConfig} + mkSection = name: attrs: '' + [${name}] + ${ + lib.concatStringsSep "\n" + (lib.mapAttrsToList + (k: v: "${k}=${mkValue v}") + (lib.filterAttrs + (k: v: v != null) + attrs)) + } ''; + configFile = pkgs.writeText "NetworkManager.conf" (lib.concatStringsSep "\n" [ + (mkSection "main" { + plugins = "keyfile"; + dhcp = cfg.dhcp; + dns = cfg.dns; + # If resolvconf is disabled that means that resolv.conf is managed by some other module. + rc-manager = + if config.networking.resolvconf.enable then "resolvconf" + else "unmanaged"; + }) + (mkSection "keyfile" { + unmanaged-devices = + if cfg.unmanaged == [] then null + else lib.concatStringsSep ";" cfg.unmanaged; + }) + (mkSection "logging" { + audit = config.security.audit.enable; + level = cfg.logLevel; + }) + (mkSection "connection" cfg.connectionConfig) + (mkSection "device" { + "wifi.scan-rand-mac-address" = cfg.wifi.scanRandMacAddress; + "wifi.backend" = cfg.wifi.backend; + }) + cfg.extraConfig + ]); + /* [network-manager] Identity=unix-group:networkmanager @@ -154,6 +169,28 @@ in { ''; }; + connectionConfig = mkOption { + type = with types; attrsOf (nullOr (oneOf [ + bool + int + str + ])); + default = {}; + description = '' + Configuration for the [connection] section of NetworkManager.conf. + Refer to + + https://developer.gnome.org/NetworkManager/stable/NetworkManager.conf.html#id-1.2.3.11 + + or + + NetworkManager.conf + 5 + + for more information. + ''; + }; + extraConfig = mkOption { type = types.lines; default = ""; @@ -482,6 +519,18 @@ in { (mkIf enableIwd { wireless.iwd.enable = true; }) + + { + networkmanager.connectionConfig = { + "ipv6.ip6-privacy" = 2; + "ethernet.cloned-mac-address" = cfg.ethernet.macAddress; + "wifi.cloned-mac-address" = cfg.wifi.macAddress; + "wifi.powersave" = + if cfg.wifi.powersave == null then null + else if cfg.wifi.powersave then 3 + else 2; + }; + } ]; boot.kernelModules = [ "ctr" ]; diff --git a/third_party/nixpkgs/nixos/modules/services/networking/pleroma.nix b/third_party/nixpkgs/nixos/modules/services/networking/pleroma.nix index 2687230a15..bd75083a4a 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/pleroma.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/pleroma.nix @@ -8,7 +8,7 @@ in { package = mkOption { type = types.package; - default = pkgs.pleroma-otp; + default = pkgs.pleroma; description = "Pleroma package to use."; }; diff --git a/third_party/nixpkgs/nixos/modules/services/networking/solanum.nix b/third_party/nixpkgs/nixos/modules/services/networking/solanum.nix index b6496fb8b3..dc066a2454 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/solanum.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/solanum.nix @@ -2,7 +2,7 @@ let inherit (lib) mkEnableOption mkIf mkOption types; - inherit (pkgs) solanum; + inherit (pkgs) solanum util-linux; cfg = config.services.solanum; configFile = pkgs.writeText "solanum.conf" cfg.config; @@ -78,12 +78,20 @@ in config = mkIf cfg.enable (lib.mkMerge [ { + + environment.etc."solanum/ircd.conf".source = configFile; + systemd.services.solanum = { description = "Solanum IRC daemon"; after = [ "network.target" ]; wantedBy = [ "multi-user.target" ]; + reloadIfChanged = true; + restartTriggers = [ + configFile + ]; serviceConfig = { - ExecStart = "${solanum}/bin/solanum -foreground -logfile /dev/stdout -configfile ${configFile} -pidfile /run/solanum/ircd.pid"; + ExecStart = "${solanum}/bin/solanum -foreground -logfile /dev/stdout -configfile /etc/solanum/ircd.conf -pidfile /run/solanum/ircd.pid"; + ExecReload = "${util-linux}/bin/kill -HUP $MAINPID"; DynamicUser = true; User = "solanum"; StateDirectory = "solanum"; diff --git a/third_party/nixpkgs/nixos/modules/services/networking/ssh/sshd.nix b/third_party/nixpkgs/nixos/modules/services/networking/ssh/sshd.nix index 089c7a12af..91caa2ccb4 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/ssh/sshd.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/ssh/sshd.nix @@ -41,6 +41,10 @@ let Warning: If you are using NixOps then don't use this option since it will replace the key required for deployment via ssh. ''; + example = [ + "ssh-rsa AAAAB3NzaC1yc2etc/etc/etcjwrsh8e596z6J0l7 example@host" + "ssh-ed25519 AAAAC3NzaCetcetera/etceteraJZMfk3QPfQ foo@bar" + ]; }; keyFiles = mkOption { @@ -252,7 +256,17 @@ in authorizedKeysFiles = mkOption { type = types.listOf types.str; default = []; - description = "Files from which authorized keys are read."; + description = '' + Specify the rules for which files to read on the host. + + This is an advanced option. If you're looking to configure user + keys, you can generally use + or . + + These are paths relative to the host root file system or home + directories and they are subject to certain token expansion rules. + See AuthorizedKeysFile in man sshd_config for details. + ''; }; authorizedKeysCommand = mkOption { @@ -337,15 +351,12 @@ in logLevel = mkOption { type = types.enum [ "QUIET" "FATAL" "ERROR" "INFO" "VERBOSE" "DEBUG" "DEBUG1" "DEBUG2" "DEBUG3" ]; - default = "VERBOSE"; + default = "INFO"; # upstream default description = '' Gives the verbosity level that is used when logging messages from sshd(8). The possible values are: - QUIET, FATAL, ERROR, INFO, VERBOSE, DEBUG, DEBUG1, DEBUG2, and DEBUG3. The default is VERBOSE. DEBUG and DEBUG1 + QUIET, FATAL, ERROR, INFO, VERBOSE, DEBUG, DEBUG1, DEBUG2, and DEBUG3. The default is INFO. DEBUG and DEBUG1 are equivalent. DEBUG2 and DEBUG3 each specify higher levels of debugging output. Logging with a DEBUG level violates the privacy of users and is not recommended. - - LogLevel VERBOSE logs user's key fingerprint on login. - Needed to have a clear audit track of which key was used to log in. ''; }; diff --git a/third_party/nixpkgs/nixos/modules/services/networking/tailscale.nix b/third_party/nixpkgs/nixos/modules/services/networking/tailscale.nix index 9a28a266a9..c33a38179e 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/tailscale.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/tailscale.nix @@ -15,6 +15,12 @@ in { description = "The port to listen on for tunnel traffic (0=autoselect)."; }; + interfaceName = mkOption { + type = types.str; + default = "tailscale0"; + description = ''The interface name for tunnel traffic. Use "userspace-networking" (beta) to not use TUN.''; + }; + package = mkOption { type = types.package; default = pkgs.tailscale; @@ -29,7 +35,10 @@ in { systemd.services.tailscaled = { wantedBy = [ "multi-user.target" ]; path = [ pkgs.openresolv ]; - serviceConfig.Environment = "PORT=${toString cfg.port}"; + serviceConfig.Environment = [ + "PORT=${toString cfg.port}" + ''"FLAGS=--tun ${lib.escapeShellArg cfg.interfaceName}"'' + ]; }; }; } diff --git a/third_party/nixpkgs/nixos/modules/services/networking/ucarp.nix b/third_party/nixpkgs/nixos/modules/services/networking/ucarp.nix new file mode 100644 index 0000000000..9b19a19687 --- /dev/null +++ b/third_party/nixpkgs/nixos/modules/services/networking/ucarp.nix @@ -0,0 +1,183 @@ +{ config, lib, pkgs, ... }: + +with lib; + +let + cfg = config.networking.ucarp; + + ucarpExec = concatStringsSep " " ( + [ + "${cfg.package}/bin/ucarp" + "--interface=${cfg.interface}" + "--srcip=${cfg.srcIp}" + "--vhid=${toString cfg.vhId}" + "--passfile=${cfg.passwordFile}" + "--addr=${cfg.addr}" + "--advbase=${toString cfg.advBase}" + "--advskew=${toString cfg.advSkew}" + "--upscript=${cfg.upscript}" + "--downscript=${cfg.downscript}" + "--deadratio=${toString cfg.deadratio}" + ] + ++ (optional cfg.preempt "--preempt") + ++ (optional cfg.neutral "--neutral") + ++ (optional cfg.shutdown "--shutdown") + ++ (optional cfg.ignoreIfState "--ignoreifstate") + ++ (optional cfg.noMcast "--nomcast") + ++ (optional (cfg.extraParam != null) "--xparam=${cfg.extraParam}") + ); +in { + options.networking.ucarp = { + enable = mkEnableOption "ucarp, userspace implementation of CARP"; + + interface = mkOption { + type = types.str; + description = "Network interface to bind to."; + example = "eth0"; + }; + + srcIp = mkOption { + type = types.str; + description = "Source (real) IP address of this host."; + }; + + vhId = mkOption { + type = types.ints.between 1 255; + description = "Virtual IP identifier shared between CARP hosts."; + example = 1; + }; + + passwordFile = mkOption { + type = types.str; + description = "File containing shared password between CARP hosts."; + example = "/run/keys/ucarp-password"; + }; + + preempt = mkOption { + type = types.bool; + description = '' + Enable preemptive failover. + Thus, this host becomes the CARP master as soon as possible. + ''; + default = false; + }; + + neutral = mkOption { + type = types.bool; + description = "Do not run downscript at start if the host is the backup."; + default = false; + }; + + addr = mkOption { + type = types.str; + description = "Virtual shared IP address."; + }; + + advBase = mkOption { + type = types.ints.unsigned; + description = "Advertisement frequency in seconds."; + default = 1; + }; + + advSkew = mkOption { + type = types.ints.unsigned; + description = "Advertisement skew in seconds."; + default = 0; + }; + + upscript = mkOption { + type = types.path; + description = '' + Command to run after become master, the interface name, virtual address + and optional extra parameters are passed as arguments. + ''; + example = '' + pkgs.writeScript "upscript" ''' + #!/bin/sh + $\{pkgs.iproute2\}/bin/ip addr add "$2"/24 dev "$1" + '''; + ''; + }; + + downscript = mkOption { + type = types.path; + description = '' + Command to run after become backup, the interface name, virtual address + and optional extra parameters are passed as arguments. + ''; + example = '' + pkgs.writeScript "downscript" ''' + #!/bin/sh + $\{pkgs.iproute2\}/bin/ip addr del "$2"/24 dev "$1" + '''; + ''; + }; + + deadratio = mkOption { + type = types.ints.unsigned; + description = "Ratio to consider a host as dead."; + default = 3; + }; + + shutdown = mkOption { + type = types.bool; + description = "Call downscript at exit."; + default = false; + }; + + ignoreIfState = mkOption { + type = types.bool; + description = "Ignore interface state, e.g., down or no carrier."; + default = false; + }; + + noMcast = mkOption { + type = types.bool; + description = "Use broadcast instead of multicast advertisements."; + default = false; + }; + + extraParam = mkOption { + type = types.nullOr types.str; + description = "Extra parameter to pass to the up/down scripts."; + default = null; + }; + + package = mkOption { + type = types.package; + description = '' + Package that should be used for ucarp. + + Please note that the default package, pkgs.ucarp, has not received any + upstream updates for a long time and can be considered as unmaintained. + ''; + default = pkgs.ucarp; + defaultText = "pkgs.ucarp"; + }; + }; + + config = mkIf cfg.enable { + systemd.services.ucarp = { + description = "ucarp, userspace implementation of CARP"; + + wantedBy = [ "multi-user.target" ]; + after = [ "network.target" ]; + + serviceConfig = { + Type = "exec"; + ExecStart = ucarpExec; + + ProtectSystem = "strict"; + ProtectHome = true; + PrivateTmp = true; + ProtectClock = true; + ProtectKernelModules = true; + ProtectControlGroups = true; + MemoryDenyWriteExecute = true; + RestrictRealtime = true; + }; + }; + }; + + meta.maintainers = with lib.maintainers; [ oxzi ]; +} diff --git a/third_party/nixpkgs/nixos/modules/services/networking/wpa_supplicant.nix b/third_party/nixpkgs/nixos/modules/services/networking/wpa_supplicant.nix index 8a0685c3d9..c0a4ce4076 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/wpa_supplicant.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/wpa_supplicant.nix @@ -42,6 +42,11 @@ in { description = '' The interfaces wpa_supplicant will use. If empty, it will automatically use all wireless interfaces. + + The automatic discovery of interfaces does not work reliably on boot: + it may fail and leave the system without network. When possible, specify + a known interface name. + ''; }; @@ -225,6 +230,14 @@ in { message = ''options networking.wireless."${name}".{psk,pskRaw,auth} are mutually exclusive''; }); + warnings = + optional (cfg.interfaces == [] && config.systemd.services.wpa_supplicant.wantedBy != []) + '' + No network interfaces for wpa_supplicant have been configured: the service + may randomly fail to start at boot. You should specify at least one using the option + networking.wireless.interfaces. + ''; + environment.systemPackages = [ package ]; services.dbus.packages = [ package ]; diff --git a/third_party/nixpkgs/nixos/modules/programs/x2goserver.nix b/third_party/nixpkgs/nixos/modules/services/networking/x2goserver.nix similarity index 92% rename from third_party/nixpkgs/nixos/modules/programs/x2goserver.nix rename to third_party/nixpkgs/nixos/modules/services/networking/x2goserver.nix index 05707a5654..48020fc1ce 100644 --- a/third_party/nixpkgs/nixos/modules/programs/x2goserver.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/x2goserver.nix @@ -3,7 +3,7 @@ with lib; let - cfg = config.programs.x2goserver; + cfg = config.services.x2goserver; defaults = { superenicer = { enable = cfg.superenicer.enable; }; @@ -17,7 +17,11 @@ let ''; in { - options.programs.x2goserver = { + imports = [ + (mkRenamedOptionModule [ "programs" "x2goserver" ] [ "services" "x2goserver" ]) + ]; + + options.services.x2goserver = { enable = mkEnableOption "x2goserver" // { description = '' Enables the x2goserver module. @@ -63,6 +67,14 @@ in { config = mkIf cfg.enable { + # x2goserver can run X11 program even if "services.xserver.enable = false" + xdg = { + autostart.enable = true; + menus.enable = true; + mime.enable = true; + icons.enable = true; + }; + environment.systemPackages = [ pkgs.x2goserver ]; users.groups.x2go = {}; diff --git a/third_party/nixpkgs/nixos/modules/services/networking/xrdp.nix b/third_party/nixpkgs/nixos/modules/services/networking/xrdp.nix index b7dd1c5d99..9be7c3233e 100644 --- a/third_party/nixpkgs/nixos/modules/services/networking/xrdp.nix +++ b/third_party/nixpkgs/nixos/modules/services/networking/xrdp.nix @@ -61,6 +61,12 @@ in ''; }; + openFirewall = mkOption { + default = false; + type = types.bool; + description = "Whether to open the firewall for the specified RDP port."; + }; + sslKey = mkOption { type = types.str; default = "/etc/xrdp/key.pem"; @@ -99,6 +105,8 @@ in config = mkIf cfg.enable { + networking.firewall.allowedTCPPorts = mkIf cfg.openFirewall [ cfg.port ]; + # xrdp can run X11 program even if "services.xserver.enable = false" xdg = { autostart.enable = true; diff --git a/third_party/nixpkgs/nixos/modules/services/security/fail2ban.nix b/third_party/nixpkgs/nixos/modules/services/security/fail2ban.nix index 0c24972823..499d346675 100644 --- a/third_party/nixpkgs/nixos/modules/services/security/fail2ban.nix +++ b/third_party/nixpkgs/nixos/modules/services/security/fail2ban.nix @@ -45,7 +45,12 @@ in enable = mkOption { default = false; type = types.bool; - description = "Whether to enable the fail2ban service."; + description = '' + Whether to enable the fail2ban service. + + See the documentation of + for what jails are enabled by default. + ''; }; package = mkOption { @@ -221,6 +226,15 @@ in defined in /etc/fail2ban/action.d, while filters are defined in /etc/fail2ban/filter.d. + + NixOS comes with a default sshd jail; + for it to work well, + should be set to + "VERBOSE" or higher so that fail2ban + can observe failed login attempts. + This module sets it to "VERBOSE" if + not set otherwise, so enabling fail2ban can make SSH logs + more verbose. ''; }; @@ -257,7 +271,6 @@ in partOf = optional config.networking.firewall.enable "firewall.service"; restartTriggers = [ fail2banConf jailConf pathsConf ]; - reloadIfChanged = true; path = [ cfg.package cfg.packageFirewall pkgs.iproute2 ] ++ cfg.extraPackages; @@ -314,6 +327,9 @@ in banaction_allports = ${cfg.banaction-allports} ''; # Block SSH if there are too many failing connection attempts. + # Benefits from verbose sshd logging to observe failed login attempts, + # so we set that here unless the user overrode it. + services.openssh.logLevel = lib.mkDefault "VERBOSE"; services.fail2ban.jails.sshd = mkDefault '' enabled = true port = ${concatMapStringsSep "," (p: toString p) config.services.openssh.ports} diff --git a/third_party/nixpkgs/nixos/modules/services/security/privacyidea.nix b/third_party/nixpkgs/nixos/modules/services/security/privacyidea.nix index 2696dca4c7..63271848e9 100644 --- a/third_party/nixpkgs/nixos/modules/services/security/privacyidea.nix +++ b/third_party/nixpkgs/nixos/modules/services/security/privacyidea.nix @@ -7,7 +7,7 @@ let uwsgi = pkgs.uwsgi.override { plugins = [ "python3" ]; }; python = uwsgi.python3; - penv = python.withPackages (ps: [ ps.privacyidea ]); + penv = python.withPackages (const [ pkgs.privacyidea ]); logCfg = pkgs.writeText "privacyidea-log.cfg" '' [formatters] keys=detail @@ -194,7 +194,7 @@ in (mkIf cfg.enable { - environment.systemPackages = [ python.pkgs.privacyidea ]; + environment.systemPackages = [ pkgs.privacyidea ]; services.postgresql.enable = mkDefault true; diff --git a/third_party/nixpkgs/nixos/modules/services/system/self-deploy.nix b/third_party/nixpkgs/nixos/modules/services/system/self-deploy.nix index 3c82ed4fc5..33d15e08f4 100644 --- a/third_party/nixpkgs/nixos/modules/services/system/self-deploy.nix +++ b/third_party/nixpkgs/nixos/modules/services/system/self-deploy.nix @@ -37,7 +37,9 @@ in }; nixAttribute = lib.mkOption { - type = lib.types.str; + type = with lib.types; nullOr str; + + default = null; description = '' Attribute of `nixFile` that builds the current system. diff --git a/third_party/nixpkgs/nixos/modules/services/ttys/getty.nix b/third_party/nixpkgs/nixos/modules/services/ttys/getty.nix index 2480e681de..8345dfabeb 100644 --- a/third_party/nixpkgs/nixos/modules/services/ttys/getty.nix +++ b/third_party/nixpkgs/nixos/modules/services/ttys/getty.nix @@ -118,7 +118,7 @@ in let speeds = concatStringsSep "," (map toString config.services.getty.serialSpeed); in { serviceConfig.ExecStart = [ "" # override upstream default with an empty ExecStart - (gettyCmd "%I ${speeds} $TERM") + (gettyCmd "%I --keep-baud ${speeds} $TERM") ]; restartIfChanged = false; }; diff --git a/third_party/nixpkgs/nixos/modules/services/web-apps/discourse.nix b/third_party/nixpkgs/nixos/modules/services/web-apps/discourse.nix index 49958fc619..9c7166f381 100644 --- a/third_party/nixpkgs/nixos/modules/services/web-apps/discourse.nix +++ b/third_party/nixpkgs/nixos/modules/services/web-apps/discourse.nix @@ -356,7 +356,7 @@ in }; port = lib.mkOption { - type = lib.types.int; + type = lib.types.port; default = 25; description = '' The port of the SMTP server Discourse should use to diff --git a/third_party/nixpkgs/nixos/modules/services/web-apps/jitsi-meet.nix b/third_party/nixpkgs/nixos/modules/services/web-apps/jitsi-meet.nix index 2df762882f..997604754e 100644 --- a/third_party/nixpkgs/nixos/modules/services/web-apps/jitsi-meet.nix +++ b/third_party/nixpkgs/nixos/modules/services/web-apps/jitsi-meet.nix @@ -186,9 +186,10 @@ in } ]; extraModules = [ "pubsub" ]; + extraPluginPaths = [ "${pkgs.jitsi-meet-prosody}/share/prosody-plugins" ]; extraConfig = mkAfter '' - Component "focus.${cfg.hostName}" - component_secret = os.getenv("JICOFO_COMPONENT_SECRET") + Component "focus.${cfg.hostName}" "client_proxy" + target_address = "focus@auth.${cfg.hostName}" ''; virtualHosts.${cfg.hostName} = { enabled = true; @@ -254,6 +255,7 @@ in + optionalString cfg.prosody.enable '' ${config.services.prosody.package}/bin/prosodyctl register focus auth.${cfg.hostName} "$(cat /var/lib/jitsi-meet/jicofo-user-secret)" ${config.services.prosody.package}/bin/prosodyctl register jvb auth.${cfg.hostName} "$(cat ${videobridgeSecret})" + ${config.services.prosody.package}/bin/prosodyctl mod_roster_command subscribe focus.${cfg.hostName} focus@auth.${cfg.hostName} # generate self-signed certificates if [ ! -f /var/lib/jitsi-meet.crt ]; then diff --git a/third_party/nixpkgs/nixos/modules/services/web-apps/matomo.nix b/third_party/nixpkgs/nixos/modules/services/web-apps/matomo.nix index 75da474dc4..79a0354e22 100644 --- a/third_party/nixpkgs/nixos/modules/services/web-apps/matomo.nix +++ b/third_party/nixpkgs/nixos/modules/services/web-apps/matomo.nix @@ -77,6 +77,16 @@ in { ''; }; + periodicArchiveProcessingUrl = mkOption { + type = types.str; + default = "${user}.${fqdn}"; + example = "matomo.yourdomain.org"; + description = '' + URL of the host, without https prefix. By default, this is ${user}.${fqdn}, but you may want to change it if you + run Matomo on a different URL than matomo.yourdomain. + ''; + }; + nginx = mkOption { type = types.nullOr (types.submodule ( recursiveUpdate @@ -190,7 +200,7 @@ in { UMask = "0007"; CPUSchedulingPolicy = "idle"; IOSchedulingClass = "idle"; - ExecStart = "${cfg.package}/bin/matomo-console core:archive --url=https://${user}.${fqdn}"; + ExecStart = "${cfg.package}/bin/matomo-console core:archive --url=https://${cfg.periodicArchiveProcessingUrl}"; }; }; diff --git a/third_party/nixpkgs/nixos/modules/services/web-servers/apache-httpd/default.nix b/third_party/nixpkgs/nixos/modules/services/web-servers/apache-httpd/default.nix index a7b93c9c45..df7035c03c 100644 --- a/third_party/nixpkgs/nixos/modules/services/web-servers/apache-httpd/default.nix +++ b/third_party/nixpkgs/nixos/modules/services/web-servers/apache-httpd/default.nix @@ -202,7 +202,7 @@ let let documentRoot = if hostOpts.documentRoot != null then hostOpts.documentRoot - else pkgs.runCommand "empty" { preferLocalBuild = true; } "mkdir -p $out" + else pkgs.emptyDirectory ; mkLocations = locations: concatStringsSep "\n" (map (config: '' diff --git a/third_party/nixpkgs/nixos/modules/services/web-servers/darkhttpd.nix b/third_party/nixpkgs/nixos/modules/services/web-servers/darkhttpd.nix index d6649fd472..f6b693139a 100644 --- a/third_party/nixpkgs/nixos/modules/services/web-servers/darkhttpd.nix +++ b/third_party/nixpkgs/nixos/modules/services/web-servers/darkhttpd.nix @@ -19,7 +19,7 @@ in { port = mkOption { default = 80; - type = ints.u16; + type = types.port; description = '' Port to listen on. Pass 0 to let the system choose any free port for you. diff --git a/third_party/nixpkgs/nixos/modules/services/web-servers/lighttpd/default.nix b/third_party/nixpkgs/nixos/modules/services/web-servers/lighttpd/default.nix index d1cb8a8dc2..7a691aa789 100644 --- a/third_party/nixpkgs/nixos/modules/services/web-servers/lighttpd/default.nix +++ b/third_party/nixpkgs/nixos/modules/services/web-servers/lighttpd/default.nix @@ -134,7 +134,7 @@ in port = mkOption { default = 80; - type = types.int; + type = types.port; description = '' TCP port number for lighttpd to bind to. ''; diff --git a/third_party/nixpkgs/nixos/modules/services/web-servers/nginx/vhost-options.nix b/third_party/nixpkgs/nixos/modules/services/web-servers/nginx/vhost-options.nix index 1c7d402447..bc18bcaa7b 100644 --- a/third_party/nixpkgs/nixos/modules/services/web-servers/nginx/vhost-options.nix +++ b/third_party/nixpkgs/nixos/modules/services/web-servers/nginx/vhost-options.nix @@ -169,7 +169,7 @@ with lib; description = '' Whether to enable HTTP 3. This requires using pkgs.nginxQuic package - which can be achived by setting services.nginx.package = pkgs.nginxQuic;. + which can be achieved by setting services.nginx.package = pkgs.nginxQuic;. Note that HTTP 3 support is experimental and *not* yet recommended for production. Read more at https://quic.nginx.org/ diff --git a/third_party/nixpkgs/nixos/modules/services/x11/desktop-managers/cinnamon.nix b/third_party/nixpkgs/nixos/modules/services/x11/desktop-managers/cinnamon.nix index 101c64c7b3..d201c1a533 100644 --- a/third_party/nixpkgs/nixos/modules/services/x11/desktop-managers/cinnamon.nix +++ b/third_party/nixpkgs/nixos/modules/services/x11/desktop-managers/cinnamon.nix @@ -198,6 +198,7 @@ in environment.systemPackages = (with pkgs // pkgs.gnome // pkgs.cinnamon; pkgs.gnome.removePackagesByName [ # cinnamon team apps + bulky blueberry warpinator diff --git a/third_party/nixpkgs/nixos/modules/services/x11/desktop-managers/gnome.nix b/third_party/nixpkgs/nixos/modules/services/x11/desktop-managers/gnome.nix index 2b2ee019ae..b0859321a5 100644 --- a/third_party/nixpkgs/nixos/modules/services/x11/desktop-managers/gnome.nix +++ b/third_party/nixpkgs/nixos/modules/services/x11/desktop-managers/gnome.nix @@ -180,7 +180,7 @@ in enable = mkOption { type = types.bool; default = false; - description = "Enable Gnome 3 desktop manager."; + description = "Enable GNOME desktop manager."; }; sessionPath = mkOption { @@ -283,7 +283,7 @@ in (mkIf (cfg.enable || flashbackEnabled) { # Seed our configuration into nixos-generate-config system.nixos-generate-config.desktopConfiguration = ['' - # Enable the GNOME 3 Desktop Environment. + # Enable the GNOME Desktop Environment. services.xserver.displayManager.gdm.enable = true; services.xserver.desktopManager.gnome.enable = true; '']; diff --git a/third_party/nixpkgs/nixos/modules/services/x11/hardware/libinput.nix b/third_party/nixpkgs/nixos/modules/services/x11/hardware/libinput.nix index 9b0757153c..439708bc47 100644 --- a/third_party/nixpkgs/nixos/modules/services/x11/hardware/libinput.nix +++ b/third_party/nixpkgs/nixos/modules/services/x11/hardware/libinput.nix @@ -188,27 +188,27 @@ let cfg = config.services.xserver.libinput; }; mkX11ConfigForDevice = deviceType: matchIs: '' - Identifier "libinput ${deviceType} configuration" - MatchDriver "libinput" - MatchIs${matchIs} "${xorgBool true}" - ${optionalString (cfg.${deviceType}.dev != null) ''MatchDevicePath "${cfg.${deviceType}.dev}"''} - Option "AccelProfile" "${cfg.${deviceType}.accelProfile}" - ${optionalString (cfg.${deviceType}.accelSpeed != null) ''Option "AccelSpeed" "${cfg.${deviceType}.accelSpeed}"''} - ${optionalString (cfg.${deviceType}.buttonMapping != null) ''Option "ButtonMapping" "${cfg.${deviceType}.buttonMapping}"''} - ${optionalString (cfg.${deviceType}.calibrationMatrix != null) ''Option "CalibrationMatrix" "${cfg.${deviceType}.calibrationMatrix}"''} - ${optionalString (cfg.${deviceType}.clickMethod != null) ''Option "ClickMethod" "${cfg.${deviceType}.clickMethod}"''} - Option "LeftHanded" "${xorgBool cfg.${deviceType}.leftHanded}" - Option "MiddleEmulation" "${xorgBool cfg.${deviceType}.middleEmulation}" - Option "NaturalScrolling" "${xorgBool cfg.${deviceType}.naturalScrolling}" - ${optionalString (cfg.${deviceType}.scrollButton != null) ''Option "ScrollButton" "${toString cfg.${deviceType}.scrollButton}"''} - Option "ScrollMethod" "${cfg.${deviceType}.scrollMethod}" - Option "HorizontalScrolling" "${xorgBool cfg.${deviceType}.horizontalScrolling}" - Option "SendEventsMode" "${cfg.${deviceType}.sendEventsMode}" - Option "Tapping" "${xorgBool cfg.${deviceType}.tapping}" - Option "TappingDragLock" "${xorgBool cfg.${deviceType}.tappingDragLock}" - Option "DisableWhileTyping" "${xorgBool cfg.${deviceType}.disableWhileTyping}" - ${cfg.${deviceType}.additionalOptions} - ''; + Identifier "libinput ${deviceType} configuration" + MatchDriver "libinput" + MatchIs${matchIs} "${xorgBool true}" + ${optionalString (cfg.${deviceType}.dev != null) ''MatchDevicePath "${cfg.${deviceType}.dev}"''} + Option "AccelProfile" "${cfg.${deviceType}.accelProfile}" + ${optionalString (cfg.${deviceType}.accelSpeed != null) ''Option "AccelSpeed" "${cfg.${deviceType}.accelSpeed}"''} + ${optionalString (cfg.${deviceType}.buttonMapping != null) ''Option "ButtonMapping" "${cfg.${deviceType}.buttonMapping}"''} + ${optionalString (cfg.${deviceType}.calibrationMatrix != null) ''Option "CalibrationMatrix" "${cfg.${deviceType}.calibrationMatrix}"''} + ${optionalString (cfg.${deviceType}.clickMethod != null) ''Option "ClickMethod" "${cfg.${deviceType}.clickMethod}"''} + Option "LeftHanded" "${xorgBool cfg.${deviceType}.leftHanded}" + Option "MiddleEmulation" "${xorgBool cfg.${deviceType}.middleEmulation}" + Option "NaturalScrolling" "${xorgBool cfg.${deviceType}.naturalScrolling}" + ${optionalString (cfg.${deviceType}.scrollButton != null) ''Option "ScrollButton" "${toString cfg.${deviceType}.scrollButton}"''} + Option "ScrollMethod" "${cfg.${deviceType}.scrollMethod}" + Option "HorizontalScrolling" "${xorgBool cfg.${deviceType}.horizontalScrolling}" + Option "SendEventsMode" "${cfg.${deviceType}.sendEventsMode}" + Option "Tapping" "${xorgBool cfg.${deviceType}.tapping}" + Option "TappingDragLock" "${xorgBool cfg.${deviceType}.tappingDragLock}" + Option "DisableWhileTyping" "${xorgBool cfg.${deviceType}.disableWhileTyping}" + ${cfg.${deviceType}.additionalOptions} + ''; in { imports = diff --git a/third_party/nixpkgs/nixos/modules/services/x11/xserver.nix b/third_party/nixpkgs/nixos/modules/services/x11/xserver.nix index 4dde4476d2..37e004ae80 100644 --- a/third_party/nixpkgs/nixos/modules/services/x11/xserver.nix +++ b/third_party/nixpkgs/nixos/modules/services/x11/xserver.nix @@ -81,13 +81,7 @@ let monitors = forEach xrandrHeads (h: '' Option "monitor-${h.config.output}" "${h.name}" ''); - # First option is indented through the space in the config but any - # subsequent options aren't so we need to apply indentation to - # them here - monitorsIndented = if length monitors > 1 - then singleton (head monitors) ++ map (m: " " + m) (tail monitors) - else monitors; - in concatStrings monitorsIndented; + in concatStrings monitors; # Here we chain every monitor from the left to right, so we have: # m4 right of m3 right of m2 right of m1 .----.----.----.----. @@ -138,10 +132,15 @@ let echo '${cfg.filesSection}' >> $out echo 'EndSection' >> $out + echo >> $out echo "$config" >> $out ''; # */ + prefixStringLines = prefix: str: + concatMapStringsSep "\n" (line: prefix + line) (splitString "\n" str); + + indent = prefixStringLines " "; in { @@ -358,6 +357,13 @@ in description = '' The contents of the configuration file of the X server (xorg.conf). + + This option is set by multiple modules, and the configs are + concatenated together. + + In Xorg configs the last config entries take precedence, + so you may want to use lib.mkAfter on this option + to override NixOS's defaults. ''; }; @@ -736,29 +742,29 @@ in Section "ServerFlags" Option "AllowMouseOpenFail" "on" Option "DontZap" "${if cfg.enableCtrlAltBackspace then "off" else "on"}" - ${cfg.serverFlagsSection} + ${indent cfg.serverFlagsSection} EndSection Section "Module" - ${cfg.moduleSection} + ${indent cfg.moduleSection} EndSection Section "Monitor" Identifier "Monitor[0]" - ${cfg.monitorSection} + ${indent cfg.monitorSection} EndSection # Additional "InputClass" sections - ${flip concatMapStrings cfg.inputClassSections (inputClassSection: '' - Section "InputClass" - ${inputClassSection} - EndSection + ${flip (concatMapStringsSep "\n") cfg.inputClassSections (inputClassSection: '' + Section "InputClass" + ${indent inputClassSection} + EndSection '')} Section "ServerLayout" Identifier "Layout[all]" - ${cfg.serverLayoutSection} + ${indent cfg.serverLayoutSection} # Reference the Screen sections for each driver. This will # cause the X server to try each in turn. ${flip concatMapStrings (filter (d: d.display) cfg.drivers) (d: '' @@ -781,9 +787,9 @@ in Identifier "Device-${driver.name}[0]" Driver "${driver.driverName or driver.name}" ${if cfg.useGlamor then ''Option "AccelMethod" "glamor"'' else ""} - ${cfg.deviceSection} - ${driver.deviceSection or ""} - ${xrandrDeviceSection} + ${indent cfg.deviceSection} + ${indent (driver.deviceSection or "")} + ${indent xrandrDeviceSection} EndSection ${optionalString driver.display '' @@ -794,18 +800,22 @@ in Monitor "Monitor[0]" ''} - ${cfg.screenSection} - ${driver.screenSection or ""} + ${indent cfg.screenSection} + ${indent (driver.screenSection or "")} ${optionalString (cfg.defaultDepth != 0) '' DefaultDepth ${toString cfg.defaultDepth} ''} ${optionalString - (driver.name != "virtualbox" && + ( + driver.name != "virtualbox" + && (cfg.resolutions != [] || cfg.extraDisplaySettings != "" || - cfg.virtualScreen != null)) + cfg.virtualScreen != null + ) + ) (let f = depth: '' @@ -813,7 +823,7 @@ in Depth ${toString depth} ${optionalString (cfg.resolutions != []) "Modes ${concatMapStrings (res: ''"${toString res.x}x${toString res.y}"'') cfg.resolutions}"} - ${cfg.extraDisplaySettings} + ${indent cfg.extraDisplaySettings} ${optionalString (cfg.virtualScreen != null) "Virtual ${toString cfg.virtualScreen.x} ${toString cfg.virtualScreen.y}"} EndSubSection diff --git a/third_party/nixpkgs/nixos/modules/tasks/filesystems.nix b/third_party/nixpkgs/nixos/modules/tasks/filesystems.nix index 065d6cc95d..d274a38a27 100644 --- a/third_party/nixpkgs/nixos/modules/tasks/filesystems.nix +++ b/third_party/nixpkgs/nixos/modules/tasks/filesystems.nix @@ -24,13 +24,15 @@ let specialFSTypes = [ "proc" "sysfs" "tmpfs" "ramfs" "devtmpfs" "devpts" ]; + nonEmptyWithoutTrailingSlash = addCheckDesc "non-empty without trailing slash" types.str + (s: isNonEmpty s && (builtins.match ".+/" s) == null); + coreFileSystemOpts = { name, config, ... }: { options = { mountPoint = mkOption { example = "/mnt/usb"; - type = addCheckDesc "non-empty without trailing slash" types.str - (s: isNonEmpty s && (builtins.match ".+/" s) == null); + type = nonEmptyWithoutTrailingSlash; description = "Location of the mounted the file system."; }; @@ -55,6 +57,20 @@ let type = types.listOf nonEmptyStr; }; + depends = mkOption { + default = [ ]; + example = [ "/persist" ]; + type = types.listOf nonEmptyWithoutTrailingSlash; + description = '' + List of paths that should be mounted before this one. This filesystem's + and are always + checked and do not need to be included explicitly. If a path is added + to this list, any other filesystem whose mount point is a parent of + the path will be mounted before this filesystem. The paths do not need + to actually be the of some other filesystem. + ''; + }; + }; config = { @@ -238,8 +254,11 @@ in skipCheck = fs: fs.noCheck || fs.device == "none" || builtins.elem fs.fsType fsToSkipCheck; # https://wiki.archlinux.org/index.php/fstab#Filepath_spaces escape = string: builtins.replaceStrings [ " " "\t" ] [ "\\040" "\\011" ] string; - swapOptions = sw: "defaults" - + optionalString (sw.priority != null) ",pri=${toString sw.priority}"; + swapOptions = sw: concatStringsSep "," ( + [ "defaults" ] + ++ optional (sw.priority != null) "pri=${toString sw.priority}" + ++ optional (sw.discardPolicy != null) "discard${optionalString (sw.discardPolicy != "both") "=${toString sw.discardPolicy}"}" + ); in '' # This is a generated file. Do not edit! # diff --git a/third_party/nixpkgs/nixos/modules/tasks/trackpoint.nix b/third_party/nixpkgs/nixos/modules/tasks/trackpoint.nix index b154cf9f5f..029d8a0029 100644 --- a/third_party/nixpkgs/nixos/modules/tasks/trackpoint.nix +++ b/third_party/nixpkgs/nixos/modules/tasks/trackpoint.nix @@ -87,9 +87,9 @@ with lib; }) (mkIf (cfg.emulateWheel) { - services.xserver.inputClassSections = - ['' - Identifier "Trackpoint Wheel Emulation" + services.xserver.inputClassSections = [ + '' + Identifier "Trackpoint Wheel Emulation" MatchProduct "${if cfg.fakeButtons then "PS/2 Generic Mouse" else "ETPS/2 Elantech TrackPoint|Elantech PS/2 TrackPoint|TPPS/2 IBM TrackPoint|DualPoint Stick|Synaptics Inc. Composite TouchPad / TrackPoint|ThinkPad USB Keyboard with TrackPoint|USB Trackpoint pointing device|Composite TouchPad / TrackPoint|${cfg.device}"}" MatchDevicePath "/dev/input/event*" Option "EmulateWheel" "true" @@ -97,7 +97,8 @@ with lib; Option "Emulate3Buttons" "false" Option "XAxisMapping" "6 7" Option "YAxisMapping" "4 5" - '']; + '' + ]; }) (mkIf cfg.fakeButtons { diff --git a/third_party/nixpkgs/nixos/modules/virtualisation/ec2-amis.nix b/third_party/nixpkgs/nixos/modules/virtualisation/ec2-amis.nix index 892af513b0..d38f41ab39 100644 --- a/third_party/nixpkgs/nixos/modules/virtualisation/ec2-amis.nix +++ b/third_party/nixpkgs/nixos/modules/virtualisation/ec2-amis.nix @@ -348,5 +348,24 @@ let self = { "20.09".ap-east-1.hvm-ebs = "ami-0c42f97e5b1fda92f"; "20.09".sa-east-1.hvm-ebs = "ami-021637976b094959d"; - latest = self."20.09"; + # 21.05.740.aa576357673 + "21.05".eu-west-1.hvm-ebs = "ami-048dbc738074a3083"; + "21.05".eu-west-2.hvm-ebs = "ami-0234cf81fec68315d"; + "21.05".eu-west-3.hvm-ebs = "ami-020e459baf709107d"; + "21.05".eu-central-1.hvm-ebs = "ami-0857d5d1309ab8b77"; + "21.05".eu-north-1.hvm-ebs = "ami-05403e3ae53d3716f"; + "21.05".us-east-1.hvm-ebs = "ami-0d3002ba40b5b9897"; + "21.05".us-east-2.hvm-ebs = "ami-069a0ca1bde6dea52"; + "21.05".us-west-1.hvm-ebs = "ami-0b415460a84bcf9bc"; + "21.05".us-west-2.hvm-ebs = "ami-093cba49754abd7f8"; + "21.05".ca-central-1.hvm-ebs = "ami-065c13e1d52d60b33"; + "21.05".ap-southeast-1.hvm-ebs = "ami-04f570c70ff9b665e"; + "21.05".ap-southeast-2.hvm-ebs = "ami-02a3d1df595df5ef6"; + "21.05".ap-northeast-1.hvm-ebs = "ami-027836fddb5c56012"; + "21.05".ap-northeast-2.hvm-ebs = "ami-0edacd41dc7700c39"; + "21.05".ap-south-1.hvm-ebs = "ami-0b279b5bb55288059"; + "21.05".ap-east-1.hvm-ebs = "ami-06dc98082bc55c1fc"; + "21.05".sa-east-1.hvm-ebs = "ami-04737dd49b98936c6"; + + latest = self."21.05"; }; in self diff --git a/third_party/nixpkgs/nixos/modules/virtualisation/libvirtd.nix b/third_party/nixpkgs/nixos/modules/virtualisation/libvirtd.nix index 61ebc3ab8c..f45f1802d9 100644 --- a/third_party/nixpkgs/nixos/modules/virtualisation/libvirtd.nix +++ b/third_party/nixpkgs/nixos/modules/virtualisation/libvirtd.nix @@ -155,6 +155,13 @@ in { config = mkIf cfg.enable { + assertions = [ + { + assertion = config.security.polkit.enable; + message = "The libvirtd module currently requires Polkit to be enabled ('security.polkit.enable = true')."; + } + ]; + environment = { # this file is expected in /etc/qemu and not sysconfdir (/var/lib) etc."qemu/bridge.conf".text = lib.concatMapStringsSep "\n" (e: diff --git a/third_party/nixpkgs/nixos/modules/virtualisation/virtualbox-image.nix b/third_party/nixpkgs/nixos/modules/virtualisation/virtualbox-image.nix index 071edda826..272c696807 100644 --- a/third_party/nixpkgs/nixos/modules/virtualisation/virtualbox-image.nix +++ b/third_party/nixpkgs/nixos/modules/virtualisation/virtualbox-image.nix @@ -58,7 +58,19 @@ in { Run VBoxManage modifyvm --help to see more options. ''; - }; + }; + exportParams = mkOption { + type = with types; listOf (oneOf [ str int bool (listOf str) ]); + example = [ + "--vsys" "0" "--vendor" "ACME Inc." + ]; + default = []; + description = '' + Parameters passed to the Virtualbox export command. + + Run VBoxManage export --help to see more options. + ''; + }; extraDisk = mkOption { description = '' Optional extra disk/hdd configuration. @@ -158,7 +170,7 @@ in { echo "exporting VirtualBox VM..." mkdir -p $out fn="$out/${cfg.vmFileName}" - VBoxManage export "$vmName" --output "$fn" --options manifest + VBoxManage export "$vmName" --output "$fn" --options manifest ${escapeShellArgs cfg.exportParams} rm -v $diskImage diff --git a/third_party/nixpkgs/nixos/tests/acme.nix b/third_party/nixpkgs/nixos/tests/acme.nix index 6f98b0da37..fe8c4af3ea 100644 --- a/third_party/nixpkgs/nixos/tests/acme.nix +++ b/third_party/nixpkgs/nixos/tests/acme.nix @@ -392,14 +392,11 @@ in import ./make-test-python.nix ({ lib, ... }: { # Check the key hash before and after adding an alias. It should not change. # The previous test reverts the ed384 change webserver.wait_for_unit("acme-finished-a.example.test.target") - keyhash_old = webserver.succeed("md5sum /var/lib/acme/a.example.test/key.pem") switch_to(webserver, "nginx-aliases") webserver.wait_for_unit("acme-finished-a.example.test.target") check_issuer(webserver, "a.example.test", "pebble") check_connection(client, "a.example.test") check_connection(client, "b.example.test") - keyhash_new = webserver.succeed("md5sum /var/lib/acme/a.example.test/key.pem") - assert keyhash_old == keyhash_new with subtest("Can request certificates for vhost + aliases (apache-httpd)"): try: diff --git a/third_party/nixpkgs/nixos/tests/all-tests.nix b/third_party/nixpkgs/nixos/tests/all-tests.nix index d8fcbde6bc..b5126be8af 100644 --- a/third_party/nixpkgs/nixos/tests/all-tests.nix +++ b/third_party/nixpkgs/nixos/tests/all-tests.nix @@ -201,6 +201,7 @@ in jitsi-meet = handleTest ./jitsi-meet.nix {}; k3s = handleTest ./k3s.nix {}; kafka = handleTest ./kafka.nix {}; + kbd-setfont-decompress = handleTest ./kbd-setfont-decompress.nix {}; keepalived = handleTest ./keepalived.nix {}; keepassxc = handleTest ./keepassxc.nix {}; kerberos = handleTest ./kerberos/default.nix {}; @@ -431,8 +432,10 @@ in trezord = handleTest ./trezord.nix {}; trickster = handleTest ./trickster.nix {}; trilium-server = handleTestOn ["x86_64-linux"] ./trilium-server.nix {}; + txredisapi = handleTest ./txredisapi.nix {}; tuptime = handleTest ./tuptime.nix {}; turbovnc-headless-server = handleTest ./turbovnc-headless-server.nix {}; + ucarp = handleTest ./ucarp.nix {}; ucg = handleTest ./ucg.nix {}; udisks2 = handleTest ./udisks2.nix {}; unbound = handleTest ./unbound.nix {}; diff --git a/third_party/nixpkgs/nixos/tests/calibre-web.nix b/third_party/nixpkgs/nixos/tests/calibre-web.nix index 4f73b33111..0af997317f 100644 --- a/third_party/nixpkgs/nixos/tests/calibre-web.nix +++ b/third_party/nixpkgs/nixos/tests/calibre-web.nix @@ -36,7 +36,7 @@ import ./make-test-python.nix ( default.wait_for_unit("calibre-web.service") default.wait_for_open_port(${toString defaultPort}) default.succeed( - "curl --fail 'http://localhost:${toString defaultPort}/basicconfig' | grep -q 'Basic Configuration'" + "curl --fail 'http://localhost:${toString defaultPort}/basicconfig' | grep 'Basic Configuration'" ) customized.succeed( @@ -46,7 +46,7 @@ import ./make-test-python.nix ( customized.wait_for_unit("calibre-web.service") customized.wait_for_open_port(${toString port}) customized.succeed( - "curl --fail -H X-User:admin 'http://localhost:${toString port}' | grep -q test-book" + "curl --fail -H X-User:admin 'http://localhost:${toString port}' | grep test-book" ) ''; } diff --git a/third_party/nixpkgs/nixos/tests/custom-ca.nix b/third_party/nixpkgs/nixos/tests/custom-ca.nix index 7ce1101911..26f29a3e68 100644 --- a/third_party/nixpkgs/nixos/tests/custom-ca.nix +++ b/third_party/nixpkgs/nixos/tests/custom-ca.nix @@ -107,8 +107,15 @@ in ''; }; - environment.systemPackages = with pkgs; - [ xdotool firefox chromium falkon midori ]; + environment.systemPackages = with pkgs; [ + xdotool + # Firefox was disabled here, because we needed to disable p11-kit support in nss, + # which is why it will not use the system certificate store for the time being. + # firefox + chromium + falkon + midori + ]; }; testScript = '' @@ -145,7 +152,14 @@ in with subtest("Unknown CA is untrusted in curl"): machine.fail("curl -fv https://bad.example.com") - browsers = ["firefox", "chromium", "falkon", "midori"] + browsers = [ + # Firefox was disabled here, because we needed to disable p11-kit support in nss, + # which is why it will not use the system certificate store for the time being. + # "firefox", + "chromium", + "falkon", + "midori" + ] errors = ["Security Risk", "not private", "Certificate Error", "Security"] machine.wait_for_x() diff --git a/third_party/nixpkgs/nixos/tests/docker-tools.nix b/third_party/nixpkgs/nixos/tests/docker-tools.nix index 831ef2fb77..4c3c26980a 100644 --- a/third_party/nixpkgs/nixos/tests/docker-tools.nix +++ b/third_party/nixpkgs/nixos/tests/docker-tools.nix @@ -23,15 +23,15 @@ import ./make-test-python.nix ({ pkgs, ... }: { with subtest("includeStorePath"): with subtest("assumption"): docker.succeed("${examples.helloOnRoot} | docker load") - docker.succeed("set -euo pipefail; docker run --rm hello | grep -i hello") + docker.succeed("docker run --rm hello | grep -i hello") docker.succeed("docker image rm hello:latest") with subtest("includeStorePath = false; breaks example"): docker.succeed("${examples.helloOnRootNoStore} | docker load") - docker.fail("set -euo pipefail; docker run --rm hello | grep -i hello") + docker.fail("docker run --rm hello | grep -i hello") docker.succeed("docker image rm hello:latest") with subtest("includeStorePath = false; works with mounted store"): docker.succeed("${examples.helloOnRootNoStore} | docker load") - docker.succeed("set -euo pipefail; docker run --rm --volume ${builtins.storeDir}:${builtins.storeDir}:ro hello | grep -i hello") + docker.succeed("docker run --rm --volume ${builtins.storeDir}:${builtins.storeDir}:ro hello | grep -i hello") docker.succeed("docker image rm hello:latest") with subtest("Ensure Docker images use a stable date by default"): diff --git a/third_party/nixpkgs/nixos/tests/doh-proxy-rust.nix b/third_party/nixpkgs/nixos/tests/doh-proxy-rust.nix index ca150cafab..23f8616849 100644 --- a/third_party/nixpkgs/nixos/tests/doh-proxy-rust.nix +++ b/third_party/nixpkgs/nixos/tests/doh-proxy-rust.nix @@ -38,6 +38,6 @@ import ./make-test-python.nix ({ lib, pkgs, ... }: { machine.wait_for_unit("doh-proxy-rust.service") machine.wait_for_open_port(53) machine.wait_for_open_port(3000) - machine.succeed(f"curl --fail '{url}?dns={query}' | grep -qF {bin_ip}") + machine.succeed(f"curl --fail '{url}?dns={query}' | grep -F {bin_ip}") ''; }) diff --git a/third_party/nixpkgs/nixos/tests/elk.nix b/third_party/nixpkgs/nixos/tests/elk.nix index fee350de65..2a1a4cba29 100644 --- a/third_party/nixpkgs/nixos/tests/elk.nix +++ b/third_party/nixpkgs/nixos/tests/elk.nix @@ -56,6 +56,24 @@ let ''); }; + metricbeat = { + enable = true; + package = elk.metricbeat; + modules.system = { + metricsets = ["cpu" "load" "memory" "network" "process" "process_summary" "uptime" "socket_summary"]; + enabled = true; + period = "5s"; + processes = [".*"]; + cpu.metrics = ["percentages" "normalized_percentages"]; + core.metrics = ["percentages"]; + }; + settings = { + output.elasticsearch = { + hosts = ["127.0.0.1:9200"]; + }; + }; + }; + logstash = { enable = true; package = elk.logstash; @@ -135,6 +153,16 @@ let ) + def has_metricbeat(): + dictionary = {"query": {"match": {"event.dataset": {"query": "system.cpu"}}}} + return ( + "curl --silent --show-error '${esUrl}/_search' " + + "-H 'Content-Type: application/json' " + + "-d '{}' ".format(json.dumps(dictionary)) + + "| jq '.hits.total > 0'" + ) + + start_all() one.wait_for_unit("elasticsearch.service") @@ -161,6 +189,12 @@ let "curl --silent --show-error 'http://localhost:5601/api/status' | jq .status.overall.state | grep green" ) + with subtest("Metricbeat is running"): + one.wait_for_unit("metricbeat.service") + + with subtest("Metricbeat metrics arrive in elasticsearch"): + one.wait_until_succeeds(has_metricbeat() + " | tee /dev/console | grep 'true'") + with subtest("Logstash messages arive in elasticsearch"): one.wait_until_succeeds(total_hits("flowers") + " | grep -v 0") one.wait_until_succeeds(total_hits("dragons") + " | grep 0") @@ -178,7 +212,7 @@ let one.systemctl("stop logstash") one.systemctl("start elasticsearch-curator") one.wait_until_succeeds( - '! curl --silent --show-error "${esUrl}/_cat/indices" | grep logstash | grep -q ^' + '! curl --silent --show-error "${esUrl}/_cat/indices" | grep logstash | grep ^' ) ''; }) {}; @@ -190,12 +224,14 @@ in pkgs.lib.mapAttrs mkElkTest { logstash = pkgs.logstash6; kibana = pkgs.kibana6; journalbeat = pkgs.journalbeat6; + metricbeat = pkgs.metricbeat6; } else { elasticsearch = pkgs.elasticsearch6-oss; logstash = pkgs.logstash6-oss; kibana = pkgs.kibana6-oss; journalbeat = pkgs.journalbeat6; + metricbeat = pkgs.metricbeat6; }; ELK-7 = if enableUnfree @@ -204,11 +240,13 @@ in pkgs.lib.mapAttrs mkElkTest { logstash = pkgs.logstash7; kibana = pkgs.kibana7; journalbeat = pkgs.journalbeat7; + metricbeat = pkgs.metricbeat7; } else { elasticsearch = pkgs.elasticsearch7-oss; logstash = pkgs.logstash7-oss; kibana = pkgs.kibana7-oss; journalbeat = pkgs.journalbeat7; + metricbeat = pkgs.metricbeat7; }; } diff --git a/third_party/nixpkgs/nixos/tests/firefox.nix b/third_party/nixpkgs/nixos/tests/firefox.nix index 4262f5443b..2e27ac302a 100644 --- a/third_party/nixpkgs/nixos/tests/firefox.nix +++ b/third_party/nixpkgs/nixos/tests/firefox.nix @@ -46,7 +46,7 @@ import ./make-test-python.nix ({ pkgs, esr ? false, ... }: { systemd.services.audio-recorder = { description = "Record NixOS test audio to /tmp/record.wav"; - script = "${pkgs.alsaUtils}/bin/arecord -D recorder -f S16_LE -r48000 /tmp/record.wav"; + script = "${pkgs.alsa-utils}/bin/arecord -D recorder -f S16_LE -r48000 /tmp/record.wav"; }; }; diff --git a/third_party/nixpkgs/nixos/tests/gitlab.nix b/third_party/nixpkgs/nixos/tests/gitlab.nix index af2ab12bf4..696ebabb58 100644 --- a/third_party/nixpkgs/nixos/tests/gitlab.nix +++ b/third_party/nixpkgs/nixos/tests/gitlab.nix @@ -102,7 +102,7 @@ import ./make-test-python.nix ({ pkgs, lib, ...} : with lib; { # `doSetup` is is true. test = doSetup: '' gitlab.succeed( - "curl -isSf http://gitlab | grep -i location | grep -q http://gitlab/users/sign_in" + "curl -isSf http://gitlab | grep -i location | grep http://gitlab/users/sign_in" ) gitlab.succeed( "${pkgs.sudo}/bin/sudo -u gitlab -H gitlab-rake gitlab:check 1>&2" diff --git a/third_party/nixpkgs/nixos/tests/go-neb.nix b/third_party/nixpkgs/nixos/tests/go-neb.nix index f8801ff68d..4bd03dcf3c 100644 --- a/third_party/nixpkgs/nixos/tests/go-neb.nix +++ b/third_party/nixpkgs/nixos/tests/go-neb.nix @@ -10,10 +10,11 @@ import ./make-test-python.nix ({ pkgs, ... }: services.go-neb = { enable = true; baseUrl = "http://localhost"; + secretFile = pkgs.writeText "secrets" "ACCESS_TOKEN=changeme"; config = { clients = [ { UserId = "@test:localhost"; - AccessToken = "changeme"; + AccessToken = "$ACCESS_TOKEN"; HomeServerUrl = "http://localhost"; Sync = false; AutoJoinRooms = false; @@ -33,11 +34,10 @@ import ./make-test-python.nix ({ pkgs, ... }: testScript = '' start_all() server.wait_for_unit("go-neb.service") - server.wait_until_succeeds( - "curl -fL http://localhost:4050/services/hooks/d2lraXBlZGlhX3NlcnZpY2U" - ) - server.wait_until_succeeds( - "journalctl -eu go-neb -o cat | grep -q service_id=wikipedia_service" + server.wait_until_succeeds("curl -fL http://localhost:4050/services/hooks/d2lraXBlZGlhX3NlcnZpY2U") + server.succeed( + "journalctl -eu go-neb -o cat | grep -q service_id=wikipedia_service", + "grep -q changeme /var/run/go-neb/config.yaml", ) ''; diff --git a/third_party/nixpkgs/nixos/tests/gocd-agent.nix b/third_party/nixpkgs/nixos/tests/gocd-agent.nix index 75edf43ee2..686d0b971d 100644 --- a/third_party/nixpkgs/nixos/tests/gocd-agent.nix +++ b/third_party/nixpkgs/nixos/tests/gocd-agent.nix @@ -42,7 +42,7 @@ import ./make-test-python.nix ({ pkgs, ...} : { "curl ${serverUrl} -H '${header}' | ${pkgs.jq}/bin/jq -e ._embedded.agents[0].uuid" ) agent.succeed( - "curl ${serverUrl} -H '${header}' | ${pkgs.jq}/bin/jq -e ._embedded.agents[0].agent_state | grep -q Idle" + "curl ${serverUrl} -H '${header}' | ${pkgs.jq}/bin/jq -e ._embedded.agents[0].agent_state | grep Idle" ) ''; }) diff --git a/third_party/nixpkgs/nixos/tests/grafana.nix b/third_party/nixpkgs/nixos/tests/grafana.nix index 4ba091b893..174d664d87 100644 --- a/third_party/nixpkgs/nixos/tests/grafana.nix +++ b/third_party/nixpkgs/nixos/tests/grafana.nix @@ -74,7 +74,7 @@ in { declarativePlugins.wait_for_unit("grafana.service") declarativePlugins.wait_for_open_port(3000) declarativePlugins.succeed( - "curl -sSfN -u testadmin:snakeoilpwd http://127.0.0.1:3000/api/plugins | grep -q grafana-clock-panel" + "curl -sSfN -u testadmin:snakeoilpwd http://127.0.0.1:3000/api/plugins | grep grafana-clock-panel" ) declarativePlugins.shutdown() @@ -82,7 +82,7 @@ in { sqlite.wait_for_unit("grafana.service") sqlite.wait_for_open_port(3000) sqlite.succeed( - "curl -sSfN -u testadmin:snakeoilpwd http://127.0.0.1:3000/api/org/users | grep -q testadmin\@localhost" + "curl -sSfN -u testadmin:snakeoilpwd http://127.0.0.1:3000/api/org/users | grep testadmin\@localhost" ) sqlite.shutdown() @@ -92,7 +92,7 @@ in { postgresql.wait_for_open_port(3000) postgresql.wait_for_open_port(5432) postgresql.succeed( - "curl -sSfN -u testadmin:snakeoilpwd http://127.0.0.1:3000/api/org/users | grep -q testadmin\@localhost" + "curl -sSfN -u testadmin:snakeoilpwd http://127.0.0.1:3000/api/org/users | grep testadmin\@localhost" ) postgresql.shutdown() @@ -102,7 +102,7 @@ in { mysql.wait_for_open_port(3000) mysql.wait_for_open_port(3306) mysql.succeed( - "curl -sSfN -u testadmin:snakeoilpwd http://127.0.0.1:3000/api/org/users | grep -q testadmin\@localhost" + "curl -sSfN -u testadmin:snakeoilpwd http://127.0.0.1:3000/api/org/users | grep testadmin\@localhost" ) mysql.shutdown() ''; diff --git a/third_party/nixpkgs/nixos/tests/home-assistant.nix b/third_party/nixpkgs/nixos/tests/home-assistant.nix index c75dd248ec..699be8fd7d 100644 --- a/third_party/nixpkgs/nixos/tests/home-assistant.nix +++ b/third_party/nixpkgs/nixos/tests/home-assistant.nix @@ -23,8 +23,6 @@ in { services.home-assistant = { inherit configDir; enable = true; - # includes the package with all tests enabled - package = pkgs.home-assistant; config = { homeassistant = { name = "Home"; @@ -45,6 +43,7 @@ in { payload_on = "let_there_be_light"; payload_off = "off"; }]; + # tests component-based capability assignment (CAP_NET_BIND_SERVICE) emulated_hue = { host_ip = "127.0.0.1"; listen_port = 80; @@ -100,6 +99,7 @@ in { assert "let_there_be_light" in output_log with subtest("Check systemd unit hardening"): + hass.log(hass.succeed("systemctl show home-assistant.service")) hass.log(hass.succeed("systemd-analyze security home-assistant.service")) ''; }) diff --git a/third_party/nixpkgs/nixos/tests/jenkins.nix b/third_party/nixpkgs/nixos/tests/jenkins.nix index 5898adab75..cb4207c6e7 100644 --- a/third_party/nixpkgs/nixos/tests/jenkins.nix +++ b/third_party/nixpkgs/nixos/tests/jenkins.nix @@ -2,6 +2,7 @@ # 1. jenkins service starts on master node # 2. jenkins user can be extended on both master and slave # 3. jenkins service not started on slave node +# 4. declarative jobs can be added and removed import ./make-test-python.nix ({ pkgs, ...} : { name = "jenkins"; @@ -13,7 +14,45 @@ import ./make-test-python.nix ({ pkgs, ...} : { master = { ... }: - { services.jenkins.enable = true; + { services.jenkins = { + enable = true; + jobBuilder = { + enable = true; + nixJobs = [ + { job = { + name = "job-1"; + builders = [ + { shell = '' + echo "Running job-1" + ''; + } + ]; + }; + } + + { job = { + name = "folder-1"; + project-type = "folder"; + }; + } + + { job = { + name = "folder-1/job-2"; + builders = [ + { shell = '' + echo "Running job-2" + ''; + } + ]; + }; + } + ]; + }; + }; + + specialisation.noJenkinsJobs.configuration = { + services.jenkins.jobBuilder.nixJobs = pkgs.lib.mkForce []; + }; # should have no effect services.jenkinsSlave.enable = true; @@ -32,7 +71,12 @@ import ./make-test-python.nix ({ pkgs, ...} : { }; - testScript = '' + testScript = { nodes, ... }: + let + configWithoutJobs = "${nodes.master.config.system.build.toplevel}/specialisation/noJenkinsJobs"; + jenkinsPort = nodes.master.config.services.jenkins.port; + jenkinsUrl = "http://localhost:${toString jenkinsPort}"; + in '' start_all() master.wait_for_unit("jenkins") @@ -45,5 +89,42 @@ import ./make-test-python.nix ({ pkgs, ...} : { assert "users" in groups slave.fail("systemctl is-enabled jenkins.service") + + with subtest("jobs are declarative"): + # Check that jobs are created on disk. + master.wait_for_unit("jenkins-job-builder") + master.wait_until_fails("systemctl is-active jenkins-job-builder") + master.wait_until_succeeds("test -f /var/lib/jenkins/jobs/job-1/config.xml") + master.wait_until_succeeds("test -f /var/lib/jenkins/jobs/folder-1/config.xml") + master.wait_until_succeeds("test -f /var/lib/jenkins/jobs/folder-1/jobs/job-2/config.xml") + + # Wait until jenkins is ready, reload configuration and verify it also + # sees the jobs. + master.succeed("curl --fail ${jenkinsUrl}/cli") + master.succeed("curl ${jenkinsUrl}/jnlpJars/jenkins-cli.jar -O") + master.succeed("${pkgs.jre}/bin/java -jar jenkins-cli.jar -s ${jenkinsUrl} -auth admin:$(cat /var/lib/jenkins/secrets/initialAdminPassword) reload-configuration") + out = master.succeed("${pkgs.jre}/bin/java -jar jenkins-cli.jar -s ${jenkinsUrl} -auth admin:$(cat /var/lib/jenkins/secrets/initialAdminPassword) list-jobs") + jobs = [x.strip() for x in out.splitlines()] + # Seeing jobs inside folders requires the Folders plugin + # (https://plugins.jenkins.io/cloudbees-folder/), which we don't have + # in this vanilla jenkins install, so limit ourself to non-folder jobs. + assert jobs == ['job-1'], f"jobs != ['job-1']: {jobs}" + + master.succeed( + "${configWithoutJobs}/bin/switch-to-configuration test >&2" + ) + + # Check that jobs are removed from disk. + master.wait_for_unit("jenkins-job-builder") + master.wait_until_fails("systemctl is-active jenkins-job-builder") + master.wait_until_fails("test -f /var/lib/jenkins/jobs/job-1/config.xml") + master.wait_until_fails("test -f /var/lib/jenkins/jobs/folder-1/config.xml") + master.wait_until_fails("test -f /var/lib/jenkins/jobs/folder-1/jobs/job-2/config.xml") + + # Reload jenkins' configuration and verify it also sees the jobs as removed. + master.succeed("${pkgs.jre}/bin/java -jar jenkins-cli.jar -s ${jenkinsUrl} -auth admin:$(cat /var/lib/jenkins/secrets/initialAdminPassword) reload-configuration") + out = master.succeed("${pkgs.jre}/bin/java -jar jenkins-cli.jar -s ${jenkinsUrl} -auth admin:$(cat /var/lib/jenkins/secrets/initialAdminPassword) list-jobs") + jobs = [x.strip() for x in out.splitlines()] + assert jobs == [], f"jobs != []: {jobs}" ''; }) diff --git a/third_party/nixpkgs/nixos/tests/jitsi-meet.nix b/third_party/nixpkgs/nixos/tests/jitsi-meet.nix index dec49c8312..f9a0b121a2 100644 --- a/third_party/nixpkgs/nixos/tests/jitsi-meet.nix +++ b/third_party/nixpkgs/nixos/tests/jitsi-meet.nix @@ -8,6 +8,7 @@ import ./make-test-python.nix ({ pkgs, ... }: { client = { nodes, pkgs, ... }: { }; server = { config, pkgs, ... }: { + virtualisation.memorySize = 512; services.jitsi-meet = { enable = true; hostName = "server"; @@ -36,15 +37,9 @@ import ./make-test-python.nix ({ pkgs, ... }: { server.wait_until_succeeds( "journalctl -b -u jitsi-videobridge2 -o cat | grep -q 'Performed a successful health check'" ) - server.wait_until_succeeds( - "journalctl -b -u jicofo -o cat | grep -q 'connected .JID: focus@auth.server'" - ) server.wait_until_succeeds( "journalctl -b -u prosody -o cat | grep -q 'Authenticated as focus@auth.server'" ) - server.wait_until_succeeds( - "journalctl -b -u prosody -o cat | grep -q 'focus.server:component: External component successfully authenticated'" - ) server.wait_until_succeeds( "journalctl -b -u prosody -o cat | grep -q 'Authenticated as jvb@auth.server'" ) diff --git a/third_party/nixpkgs/nixos/tests/kbd-setfont-decompress.nix b/third_party/nixpkgs/nixos/tests/kbd-setfont-decompress.nix new file mode 100644 index 0000000000..c3a495afac --- /dev/null +++ b/third_party/nixpkgs/nixos/tests/kbd-setfont-decompress.nix @@ -0,0 +1,21 @@ +import ./make-test-python.nix ({ lib, pkgs, ... }: +{ + name = "kbd-setfont-decompress"; + + meta.maintainers = with lib.maintainers; [ oxalica ]; + + machine = { ... }: {}; + + testScript = '' + machine.succeed("gzip -cd ${pkgs.terminus_font}/share/consolefonts/ter-v16b.psf.gz >font.psf") + machine.succeed("gzip font.psf.gz") + machine.succeed("bzip2 font.psf.bz2") + machine.succeed("xz font.psf.xz") + machine.succeed("zstd font.psf.zst") + # setfont returns 0 even on error. + assert machine.succeed("PATH= ${pkgs.kbd}/bin/setfont font.psf.gz 2>&1") == "" + assert machine.succeed("PATH= ${pkgs.kbd}/bin/setfont font.psf.bz2 2>&1") == "" + assert machine.succeed("PATH= ${pkgs.kbd}/bin/setfont font.psf.xz 2>&1") == "" + assert machine.succeed("PATH= ${pkgs.kbd}/bin/setfont font.psf.zst 2>&1") == "" + ''; +}) diff --git a/third_party/nixpkgs/nixos/tests/kernel-generic.nix b/third_party/nixpkgs/nixos/tests/kernel-generic.nix index a300609cf2..cd32049dff 100644 --- a/third_party/nixpkgs/nixos/tests/kernel-generic.nix +++ b/third_party/nixpkgs/nixos/tests/kernel-generic.nix @@ -31,8 +31,8 @@ with pkgs; { linux_4_19 = makeKernelTest "4.19" linuxPackages_4_19; linux_5_4 = makeKernelTest "5.4" linuxPackages_5_4; linux_5_10 = makeKernelTest "5.10" linuxPackages_5_10; - linux_5_11 = makeKernelTest "5.11" linuxPackages_5_11; linux_5_12 = makeKernelTest "5.12" linuxPackages_5_12; + linux_5_13 = makeKernelTest "5.13" linuxPackages_5_13; linux_testing = makeKernelTest "testing" linuxPackages_testing; } diff --git a/third_party/nixpkgs/nixos/tests/miniflux.nix b/third_party/nixpkgs/nixos/tests/miniflux.nix index 797a2787d1..9a25a9e77c 100644 --- a/third_party/nixpkgs/nixos/tests/miniflux.nix +++ b/third_party/nixpkgs/nixos/tests/miniflux.nix @@ -48,23 +48,23 @@ with lib; default.wait_for_unit("miniflux.service") default.wait_for_open_port(${toString defaultPort}) - default.succeed("curl --fail 'http://localhost:${toString defaultPort}/healthcheck' | grep -q OK") + default.succeed("curl --fail 'http://localhost:${toString defaultPort}/healthcheck' | grep OK") default.succeed( - "curl 'http://localhost:${toString defaultPort}/v1/me' -u '${defaultUsername}:${defaultPassword}' -H Content-Type:application/json | grep -q '\"is_admin\":true'" + "curl 'http://localhost:${toString defaultPort}/v1/me' -u '${defaultUsername}:${defaultPassword}' -H Content-Type:application/json | grep '\"is_admin\":true'" ) withoutSudo.wait_for_unit("miniflux.service") withoutSudo.wait_for_open_port(${toString defaultPort}) - withoutSudo.succeed("curl --fail 'http://localhost:${toString defaultPort}/healthcheck' | grep -q OK") + withoutSudo.succeed("curl --fail 'http://localhost:${toString defaultPort}/healthcheck' | grep OK") withoutSudo.succeed( - "curl 'http://localhost:${toString defaultPort}/v1/me' -u '${defaultUsername}:${defaultPassword}' -H Content-Type:application/json | grep -q '\"is_admin\":true'" + "curl 'http://localhost:${toString defaultPort}/v1/me' -u '${defaultUsername}:${defaultPassword}' -H Content-Type:application/json | grep '\"is_admin\":true'" ) customized.wait_for_unit("miniflux.service") customized.wait_for_open_port(${toString port}) - customized.succeed("curl --fail 'http://localhost:${toString port}/healthcheck' | grep -q OK") + customized.succeed("curl --fail 'http://localhost:${toString port}/healthcheck' | grep OK") customized.succeed( - "curl 'http://localhost:${toString port}/v1/me' -u '${username}:${password}' -H Content-Type:application/json | grep -q '\"is_admin\":true'" + "curl 'http://localhost:${toString port}/v1/me' -u '${username}:${password}' -H Content-Type:application/json | grep '\"is_admin\":true'" ) ''; }) diff --git a/third_party/nixpkgs/nixos/tests/nginx-variants.nix b/third_party/nixpkgs/nixos/tests/nginx-variants.nix index ca4655391b..a535030663 100644 --- a/third_party/nixpkgs/nixos/tests/nginx-variants.nix +++ b/third_party/nixpkgs/nixos/tests/nginx-variants.nix @@ -29,5 +29,5 @@ builtins.listToAttrs ( }; } ) - [ "nginxStable" "nginxUnstable" "nginxShibboleth" "openresty" "tengine" ] + [ "nginxStable" "nginxMainline" "nginxShibboleth" "openresty" "tengine" ] ) diff --git a/third_party/nixpkgs/nixos/tests/nginx.nix b/third_party/nixpkgs/nixos/tests/nginx.nix index 5686afcd04..d9d073822a 100644 --- a/third_party/nixpkgs/nixos/tests/nginx.nix +++ b/third_party/nixpkgs/nixos/tests/nginx.nix @@ -56,11 +56,11 @@ import ./make-test-python.nix ({ pkgs, ... }: { }; specialisation.reloadRestartSystem.configuration = { - services.nginx.package = pkgs.nginxUnstable; + services.nginx.package = pkgs.nginxMainline; }; specialisation.reloadWithErrorsSystem.configuration = { - services.nginx.package = pkgs.nginxUnstable; + services.nginx.package = pkgs.nginxMainline; services.nginx.virtualHosts."!@$$(#*%".locations."~@#*$*!)".proxyPass = ";;;"; }; }; diff --git a/third_party/nixpkgs/nixos/tests/overlayfs.nix b/third_party/nixpkgs/nixos/tests/overlayfs.nix index 142e7d378b..1768f1fea1 100644 --- a/third_party/nixpkgs/nixos/tests/overlayfs.nix +++ b/third_party/nixpkgs/nixos/tests/overlayfs.nix @@ -15,36 +15,33 @@ import ./make-test-python.nix ({ pkgs, ... }: { # Test ext4 + overlayfs machine.succeed( - """ - mkfs.ext4 -F -L overlay-ext4 /dev/vdb - mount -t ext4 /dev/vdb /tmp/mnt - mkdir -p /tmp/mnt/upper /tmp/mnt/lower /tmp/mnt/work /tmp/mnt/merged - # Setup some existing files - echo 'Replace' > /tmp/mnt/lower/replace.txt - echo 'Append' > /tmp/mnt/lower/append.txt - echo 'Overwrite' > /tmp/mnt/lower/overwrite.txt - mount -t overlay overlay -o lowerdir=/tmp/mnt/lower,upperdir=/tmp/mnt/upper,workdir=/tmp/mnt/work /tmp/mnt/merged - # Test new - echo 'New' > /tmp/mnt/merged/new.txt - [[ "\$(cat /tmp/mnt/merged/new.txt)" == "New" ]] - # Test replace - [[ "\$(cat /tmp/mnt/merged/replace.txt)" == "Replace" ]] - echo 'Replaced' > /tmp/mnt/merged/replace-tmp.txt - mv /tmp/mnt/merged/replace-tmp.txt /tmp/mnt/merged/replace.txt - [[ "\$(cat /tmp/mnt/merged/replace.txt)" == "Replaced" ]] - # Overwrite - [[ "\$(cat /tmp/mnt/merged/overwrite.txt)" == "Overwrite" ]] - echo 'Overwritten' > /tmp/mnt/merged/overwrite.txt - [[ "\$(cat /tmp/mnt/merged/overwrite.txt)" == "Overwritten" ]] - # Test append - [[ "\$(cat /tmp/mnt/merged/append.txt)" == "Append" ]] - echo 'ed' >> /tmp/mnt/merged/append.txt - #"cat /tmp/mnt/merged/append.txt && exit 1 - [[ "\$(cat /tmp/mnt/merged/append.txt)" == "Append\ned" ]] - umount /tmp/mnt/merged - umount /tmp/mnt - udevadm settle - """ + 'mkfs.ext4 -F -L overlay-ext4 /dev/vdb', + 'mount -t ext4 /dev/vdb /tmp/mnt', + 'mkdir -p /tmp/mnt/upper /tmp/mnt/lower /tmp/mnt/work /tmp/mnt/merged', + # Setup some existing files + 'echo Replace > /tmp/mnt/lower/replace.txt', + 'echo Append > /tmp/mnt/lower/append.txt', + 'echo Overwrite > /tmp/mnt/lower/overwrite.txt', + 'mount -t overlay overlay -o lowerdir=/tmp/mnt/lower,upperdir=/tmp/mnt/upper,workdir=/tmp/mnt/work /tmp/mnt/merged', + # Test new + 'echo New > /tmp/mnt/merged/new.txt', + '[[ "$(cat /tmp/mnt/merged/new.txt)" == New ]]', + # Test replace + '[[ "$(cat /tmp/mnt/merged/replace.txt)" == Replace ]]', + 'echo Replaced > /tmp/mnt/merged/replace-tmp.txt', + 'mv /tmp/mnt/merged/replace-tmp.txt /tmp/mnt/merged/replace.txt', + '[[ "$(cat /tmp/mnt/merged/replace.txt)" == Replaced ]]', + # Overwrite + '[[ "$(cat /tmp/mnt/merged/overwrite.txt)" == Overwrite ]]', + 'echo Overwritten > /tmp/mnt/merged/overwrite.txt', + '[[ "$(cat /tmp/mnt/merged/overwrite.txt)" == Overwritten ]]', + # Test append + '[[ "$(cat /tmp/mnt/merged/append.txt)" == Append ]]', + 'echo ed >> /tmp/mnt/merged/append.txt', + '[[ "$(cat /tmp/mnt/merged/append.txt)" == "Append\ned" ]]', + 'umount /tmp/mnt/merged', + 'umount /tmp/mnt', + 'udevadm settle', ) ''; }) diff --git a/third_party/nixpkgs/nixos/tests/php/default.nix b/third_party/nixpkgs/nixos/tests/php/default.nix index cf78c9db53..c038638575 100644 --- a/third_party/nixpkgs/nixos/tests/php/default.nix +++ b/third_party/nixpkgs/nixos/tests/php/default.nix @@ -1,5 +1,5 @@ { system ? builtins.currentSystem -, config ? {} +, config ? { } , pkgs ? import ../../.. { inherit system config; } , php ? pkgs.php }: @@ -8,7 +8,8 @@ let php' = php.buildEnv { extensions = { enabled, all }: with all; enabled ++ [ apcu ]; }; -in { +in +{ fpm = import ./fpm.nix { inherit system pkgs; php = php'; }; httpd = import ./httpd.nix { inherit system pkgs; php = php'; }; pcre = import ./pcre.nix { inherit system pkgs; php = php'; }; diff --git a/third_party/nixpkgs/nixos/tests/php/fpm.nix b/third_party/nixpkgs/nixos/tests/php/fpm.nix index b11f85d39c..31a79bb4db 100644 --- a/third_party/nixpkgs/nixos/tests/php/fpm.nix +++ b/third_party/nixpkgs/nixos/tests/php/fpm.nix @@ -1,4 +1,4 @@ -import ../make-test-python.nix ({pkgs, lib, php, ...}: { +import ../make-test-python.nix ({ pkgs, lib, php, ... }: { name = "php-${php.version}-fpm-nginx-test"; meta.maintainers = lib.teams.php.members; @@ -8,21 +8,23 @@ import ../make-test-python.nix ({pkgs, lib, php, ...}: { services.nginx = { enable = true; - virtualHosts."phpfpm" = let - testdir = pkgs.writeTextDir "web/index.php" " yasm != null; assert artworkSupport -> imlib2 != null; assert hotkeysSupport -> libX11 != null; assert osdSupport -> dbus != null; -assert alsaSupport -> alsaLib != null; +assert alsaSupport -> alsa-lib != null; assert pulseSupport -> libpulseaudio != null; assert resamplerSupport -> libsamplerate != null; assert overloadSupport -> zlib != null; @@ -84,7 +84,7 @@ stdenv.mkDerivation rec { ++ optional artworkSupport imlib2 ++ optional hotkeysSupport libX11 ++ optional osdSupport dbus - ++ optional alsaSupport alsaLib + ++ optional alsaSupport alsa-lib ++ optional pulseSupport libpulseaudio ++ optional resamplerSupport libsamplerate ++ optional overloadSupport zlib diff --git a/third_party/nixpkgs/pkgs/applications/audio/diopser/default.nix b/third_party/nixpkgs/pkgs/applications/audio/diopser/default.nix index 0c97d64945..339eae1a7c 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/diopser/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/diopser/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, cmake, pkg-config -, libjack2, alsaLib, freetype, libX11, libXrandr, libXinerama, libXext, libXcursor +, libjack2, alsa-lib, freetype, libX11, libXrandr, libXinerama, libXext, libXcursor }: let @@ -57,7 +57,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; buildInputs = [ - libjack2 alsaLib freetype libX11 libXrandr libXinerama libXext + libjack2 alsa-lib freetype libX11 libXrandr libXinerama libXext libXcursor ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/distrho/default.nix b/third_party/nixpkgs/pkgs/applications/audio/distrho/default.nix index 3582583333..258eec8372 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/distrho/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/distrho/default.nix @@ -1,6 +1,6 @@ { lib , stdenv -, alsaLib +, alsa-lib , fetchFromGitHub , fftwFloat , freetype @@ -32,7 +32,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config meson ninja ]; buildInputs = rpathLibs ++ [ - alsaLib + alsa-lib freetype libGL libX11 diff --git a/third_party/nixpkgs/pkgs/applications/audio/drumgizmo/default.nix b/third_party/nixpkgs/pkgs/applications/audio/drumgizmo/default.nix index ef4970a160..7dd78e5131 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/drumgizmo/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/drumgizmo/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, expat, glib, libjack2, libXext, libX11, libpng +{ lib, stdenv, fetchurl, alsa-lib, expat, glib, libjack2, libXext, libX11, libpng , libpthreadstubs, libsmf, libsndfile, lv2, pkg-config, zita-resampler }: @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; buildInputs = [ - alsaLib expat glib libjack2 libXext libX11 libpng libpthreadstubs + alsa-lib expat glib libjack2 libXext libX11 libpng libpthreadstubs libsmf libsndfile lv2 zita-resampler ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/drumkv1/default.nix b/third_party/nixpkgs/pkgs/applications/audio/drumkv1/default.nix index c175804a02..e15e4550e0 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/drumkv1/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/drumkv1/default.nix @@ -1,4 +1,4 @@ -{ mkDerivation, lib, fetchurl, pkg-config, libjack2, alsaLib, libsndfile, liblo, lv2, qt5 }: +{ mkDerivation, lib, fetchurl, pkg-config, libjack2, alsa-lib, libsndfile, liblo, lv2, qt5 }: mkDerivation rec { pname = "drumkv1"; @@ -9,7 +9,7 @@ mkDerivation rec { sha256 = "1bzkaz7sqx1pvirja8zm7i2ckzl5ad6xspr4840389ik3l8qpnr5"; }; - buildInputs = [ libjack2 alsaLib libsndfile liblo lv2 qt5.qtbase qt5.qttools ]; + buildInputs = [ libjack2 alsa-lib libsndfile liblo lv2 qt5.qtbase qt5.qttools ]; nativeBuildInputs = [ pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/ecasound/default.nix b/third_party/nixpkgs/pkgs/applications/audio/ecasound/default.nix index e2ec9bf8ab..47db220164 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/ecasound/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/ecasound/default.nix @@ -1,7 +1,7 @@ { lib, stdenv , fetchurl , pkg-config -, alsaLib +, alsa-lib , audiofile , libjack2 , liblo @@ -33,7 +33,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib audiofile libjack2 liblo diff --git a/third_party/nixpkgs/pkgs/applications/audio/eflite/default.nix b/third_party/nixpkgs/pkgs/applications/audio/eflite/default.nix index 6a974abb8a..0c48c582c4 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/eflite/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/eflite/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, fetchpatch, flite, alsaLib, debug ? false }: +{ lib, stdenv, fetchurl, fetchpatch, flite, alsa-lib, debug ? false }: stdenv.mkDerivation rec { pname = "eflite"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "088p9w816s02s64grfs28gai3lnibzdjb9d1jwxzr8smbs2qbbci"; }; - buildInputs = [ flite alsaLib ]; + buildInputs = [ flite alsa-lib ]; configureFlags = [ "flite_dir=${flite}" diff --git a/third_party/nixpkgs/pkgs/applications/audio/ensemble-chorus/default.nix b/third_party/nixpkgs/pkgs/applications/audio/ensemble-chorus/default.nix index 7858da25b7..b325512620 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/ensemble-chorus/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/ensemble-chorus/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, fltk, alsaLib, freetype, libXrandr, libXinerama, libXcursor, lv2, libjack2, cmake, pkg-config }: +{ lib, stdenv, fetchFromGitHub, fltk, alsa-lib, freetype, libXrandr, libXinerama, libXcursor, lv2, libjack2, cmake, pkg-config }: stdenv.mkDerivation rec { pname = "ensemble-chorus"; @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; buildInputs = [ - fltk alsaLib freetype libXrandr libXinerama libXcursor lv2 libjack2 + fltk alsa-lib freetype libXrandr libXinerama libXcursor lv2 libjack2 ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/audio/faust/faust2.nix b/third_party/nixpkgs/pkgs/applications/audio/faust/faust2.nix index 995618af4c..c1d351fa53 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/faust/faust2.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/faust/faust2.nix @@ -178,6 +178,12 @@ let # export parts of the build environment for script in "$out"/bin/*; do + # e.g. NIX_CC_WRAPPER_TARGET_HOST_x86_64_unknown_linux_gnu + nix_cc_wrapper_target_host="$(printenv | grep ^NIX_CC_WRAPPER_TARGET_HOST | sed 's/=.*//')" + + # e.g. NIX_BINTOOLS_WRAPPER_TARGET_HOST_x86_64_unknown_linux_gnu + nix_bintools_wrapper_target_host="$(printenv | grep ^NIX_BINTOOLS_WRAPPER_TARGET_HOST | sed 's/=.*//')" + wrapProgram "$script" \ --set FAUSTLDDIR "${faust}/lib" \ --set FAUSTLIB "${faust}/share/faust" \ @@ -187,7 +193,9 @@ let --prefix PKG_CONFIG_PATH : "$PKG_CONFIG_PATH" \ --set NIX_CFLAGS_COMPILE "$NIX_CFLAGS_COMPILE" \ --set NIX_LDFLAGS "$NIX_LDFLAGS -lpthread" \ - --prefix LIBRARY_PATH $libPath + --set "$nix_cc_wrapper_target_host" "''${!nix_cc_wrapper_target_host}" \ + --set "$nix_bintools_wrapper_target_host" "''${!nix_bintools_wrapper_target_host}" \ + --prefix LIBRARY_PATH "$libPath" done ''; }); diff --git a/third_party/nixpkgs/pkgs/applications/audio/faust/faust2alqt.nix b/third_party/nixpkgs/pkgs/applications/audio/faust/faust2alqt.nix index 8ac26e488b..111d1c9e55 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/faust/faust2alqt.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/faust/faust2alqt.nix @@ -1,5 +1,5 @@ { faust -, alsaLib +, alsa-lib , qt4 }: @@ -8,7 +8,7 @@ faust.wrapWithBuildEnv { baseName = "faust2alqt"; propagatedBuildInputs = [ - alsaLib + alsa-lib qt4 ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/faust/faust2alsa.nix b/third_party/nixpkgs/pkgs/applications/audio/faust/faust2alsa.nix index 6af5af9bba..bb6121a5d7 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/faust/faust2alsa.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/faust/faust2alsa.nix @@ -1,5 +1,5 @@ { faust -, alsaLib +, alsa-lib , atk , cairo , fontconfig @@ -15,7 +15,7 @@ faust.wrapWithBuildEnv { baseName = "faust2alsa"; propagatedBuildInputs = [ - alsaLib + alsa-lib atk cairo fontconfig diff --git a/third_party/nixpkgs/pkgs/applications/audio/faust/faust2jack.nix b/third_party/nixpkgs/pkgs/applications/audio/faust/faust2jack.nix index ab2450f1e5..bd213bfcad 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/faust/faust2jack.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/faust/faust2jack.nix @@ -1,7 +1,7 @@ { faust , gtk2 , jack2 -, alsaLib +, alsa-lib , opencv , libsndfile , which @@ -19,7 +19,7 @@ faust.wrapWithBuildEnv { propagatedBuildInputs = [ gtk2 jack2 - alsaLib + alsa-lib opencv libsndfile which diff --git a/third_party/nixpkgs/pkgs/applications/audio/faust/faust2jaqt.nix b/third_party/nixpkgs/pkgs/applications/audio/faust/faust2jaqt.nix index f6bc4d485f..6bebd97ddd 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/faust/faust2jaqt.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/faust/faust2jaqt.nix @@ -2,7 +2,7 @@ , jack2 , qt4 , libsndfile -, alsaLib +, alsa-lib , which }: @@ -19,7 +19,7 @@ faust.wrapWithBuildEnv { jack2 qt4 libsndfile - alsaLib + alsa-lib which ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/faust/faustlive.nix b/third_party/nixpkgs/pkgs/applications/audio/faust/faustlive.nix index 2b4602f78c..46d63c8431 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/faust/faustlive.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/faust/faustlive.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub -, llvm_10, qt5, qrencode, libmicrohttpd, libjack2, alsaLib, faust, curl +, llvm_10, qt5, qrencode, libmicrohttpd, libjack2, alsa-lib, faust, curl , bc, coreutils, which, libsndfile, pkg-config, libxcb }: @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config qt5.wrapQtAppsHook ]; buildInputs = [ - llvm_10 qt5.qtbase qrencode libmicrohttpd libjack2 alsaLib faust curl + llvm_10 qt5.qtbase qrencode libmicrohttpd libjack2 alsa-lib faust curl bc coreutils which libsndfile libxcb ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/fluidsynth/default.nix b/third_party/nixpkgs/pkgs/applications/audio/fluidsynth/default.nix index a1fee315d4..1a6471397d 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/fluidsynth/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/fluidsynth/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchFromGitHub, pkg-config, cmake -, alsaLib, glib, libjack2, libsndfile, libpulseaudio +, alsa-lib, glib, libjack2, libsndfile, libpulseaudio , AudioUnit, CoreAudio, CoreMIDI, CoreServices , version ? "2" }: @@ -33,7 +33,7 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkg-config cmake ]; buildInputs = [ glib libsndfile libpulseaudio libjack2 ] - ++ lib.optionals stdenv.isLinux [ alsaLib ] + ++ lib.optionals stdenv.isLinux [ alsa-lib ] ++ lib.optionals stdenv.isDarwin [ AudioUnit CoreAudio CoreMIDI CoreServices ]; cmakeFlags = [ "-Denable-framework=off" ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/fmit/default.nix b/third_party/nixpkgs/pkgs/applications/audio/fmit/default.nix index b91c72a5c7..967c984bc5 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/fmit/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/fmit/default.nix @@ -1,9 +1,9 @@ { lib, mkDerivation, fetchFromGitHub, fftw, qtbase, qtmultimedia, qmake, itstool, wrapQtAppsHook -, alsaSupport ? true, alsaLib ? null +, alsaSupport ? true, alsa-lib ? null , jackSupport ? false, libjack2 ? null , portaudioSupport ? false, portaudio ? null }: -assert alsaSupport -> alsaLib != null; +assert alsaSupport -> alsa-lib != null; assert jackSupport -> libjack2 != null; assert portaudioSupport -> portaudio != null; @@ -22,7 +22,7 @@ mkDerivation rec { nativeBuildInputs = [ qmake itstool wrapQtAppsHook ]; buildInputs = [ fftw qtbase qtmultimedia ] - ++ optionals alsaSupport [ alsaLib ] + ++ optionals alsaSupport [ alsa-lib ] ++ optionals jackSupport [ libjack2 ] ++ optionals portaudioSupport [ portaudio ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/freewheeling/default.nix b/third_party/nixpkgs/pkgs/applications/audio/freewheeling/default.nix index 7bd063d9f5..75e44d8c4f 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/freewheeling/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/freewheeling/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, pkg-config, autoreconfHook, gnutls, freetype -, SDL, SDL_gfx, SDL_ttf, liblo, libxml2, alsaLib, libjack2, libvorbis +, SDL, SDL_gfx, SDL_ttf, liblo, libxml2, alsa-lib, libjack2, libvorbis , libSM, libsndfile, libogg, libtool }: let @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config autoreconfHook libtool ]; buildInputs = [ freetype SDL SDL_gfx SDL_ttf - liblo libxml2 libjack2 alsaLib libvorbis libsndfile libogg libSM + liblo libxml2 libjack2 alsa-lib libvorbis libsndfile libogg libSM (gnutls.overrideAttrs (oldAttrs: { configureFlags = oldAttrs.configureFlags ++ [ "--enable-openssl-compatibility" ]; })) diff --git a/third_party/nixpkgs/pkgs/applications/audio/ft2-clone/default.nix b/third_party/nixpkgs/pkgs/applications/audio/ft2-clone/default.nix index 781889f9fe..5155a91e72 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/ft2-clone/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/ft2-clone/default.nix @@ -2,7 +2,7 @@ , fetchFromGitHub , cmake , nixosTests -, alsaLib +, alsa-lib , SDL2 , libiconv , CoreAudio @@ -29,7 +29,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; buildInputs = [ SDL2 ] - ++ lib.optional stdenv.isLinux alsaLib + ++ lib.optional stdenv.isLinux alsa-lib ++ lib.optionals stdenv.isDarwin [ libiconv CoreAudio diff --git a/third_party/nixpkgs/pkgs/applications/audio/gbsplay/default.nix b/third_party/nixpkgs/pkgs/applications/audio/gbsplay/default.nix index 7cee125f6e..3d280ca72a 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/gbsplay/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/gbsplay/default.nix @@ -1,28 +1,32 @@ -{ lib, stdenv, fetchFromGitHub, libpulseaudio }: +{ lib, stdenv, fetchFromGitHub, installShellFiles, libpulseaudio, nas }: -stdenv.mkDerivation { - name = "gbsplay-2016-12-17"; +stdenv.mkDerivation rec { + pname = "gbsplay"; + version = "0.0.94"; src = fetchFromGitHub { owner = "mmitch"; repo = "gbsplay"; - rev = "2c4486e17fd4f4cdea8c3fd79ae898c892616b70"; - sha256 = "1214j67sr87zfhvym41cw2g823fmqh4hr451r7y1s9ql3jpjqhpz"; + rev = version; + sha256 = "VpaXbjotmc/Ref1geiKkBX9UhbPxfAGkFAdKVxP8Uxo="; }; - buildInputs = [ libpulseaudio ]; + configureFlags = [ + "--without-test" # See mmitch/gbsplay#62 + "--without-contrib" + ]; - configureFlags = - [ "--without-test" "--without-contrib" "--disable-devdsp" - "--enable-pulse" "--disable-alsa" "--disable-midi" - "--disable-nas" "--disable-dsound" "--disable-i18n" ]; + nativeBuildInputs = [ installShellFiles ]; + buildInputs = [ libpulseaudio nas ]; - makeFlags = [ "tests=" ]; + postInstall = '' + installShellCompletion --bash --name gbsplay contrib/gbsplay.bashcompletion + ''; meta = with lib; { - description = "gameboy sound player"; + description = "Gameboy sound player"; license = licenses.gpl1; - platforms = ["i686-linux" "x86_64-linux"]; + platforms = [ "i686-linux" "x86_64-linux" ]; maintainers = with maintainers; [ dasuxullebt ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/audio/giada/default.nix b/third_party/nixpkgs/pkgs/applications/audio/giada/default.nix index c9b3216ede..b49335298e 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/giada/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/giada/default.nix @@ -7,7 +7,7 @@ , libsamplerate , libsndfile , jack2 -, alsaLib +, alsa-lib , libpulseaudio , libXpm , libXinerama @@ -44,7 +44,7 @@ stdenv.mkDerivation rec { rtmidi libXpm jack2 - alsaLib + alsa-lib libpulseaudio libXinerama libXcursor diff --git a/third_party/nixpkgs/pkgs/applications/audio/google-play-music-desktop-player/default.nix b/third_party/nixpkgs/pkgs/applications/audio/google-play-music-desktop-player/default.nix index 9d891d3023..74286073b9 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/google-play-music-desktop-player/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/google-play-music-desktop-player/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, alsaLib, atk, at-spi2-atk, cairo, cups, dbus, dpkg, expat, fontconfig, freetype +{ lib, stdenv, alsa-lib, atk, at-spi2-atk, cairo, cups, dbus, dpkg, expat, fontconfig, freetype , fetchurl, GConf, gdk-pixbuf, glib, gtk2, gtk3, libpulseaudio, makeWrapper, nspr , nss, pango, udev, xorg }: @@ -7,7 +7,7 @@ let version = "4.7.1"; deps = [ - alsaLib + alsa-lib atk at-spi2-atk cairo diff --git a/third_party/nixpkgs/pkgs/applications/audio/grandorgue/default.nix b/third_party/nixpkgs/pkgs/applications/audio/grandorgue/default.nix index 2d660bc736..30c6e57188 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/grandorgue/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/grandorgue/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchsvn, cmake, gcc, pkg-config, fftwFloat, alsaLib +{ lib, stdenv, fetchsvn, cmake, gcc, pkg-config, fftwFloat, alsa-lib , zlib, wavpack, wxGTK31, udev, jackaudioSupport ? false, libjack2 , includeDemo ? true }: @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; - buildInputs = [ pkg-config fftwFloat alsaLib zlib wavpack wxGTK31 udev ] + buildInputs = [ pkg-config fftwFloat alsa-lib zlib wavpack wxGTK31 udev ] ++ lib.optional jackaudioSupport libjack2; cmakeFlags = lib.optional (!jackaudioSupport) [ diff --git a/third_party/nixpkgs/pkgs/applications/audio/gwc/default.nix b/third_party/nixpkgs/pkgs/applications/audio/gwc/default.nix index 175d5e4cb5..aeb64b92c8 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/gwc/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/gwc/default.nix @@ -2,7 +2,7 @@ , fetchFromGitHub , autoreconfHook , pkg-config -, alsaLib +, alsa-lib , libpulseaudio , gtk2 , hicolor-icon-theme @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib libpulseaudio gtk2 hicolor-icon-theme diff --git a/third_party/nixpkgs/pkgs/applications/audio/helio-workstation/default.nix b/third_party/nixpkgs/pkgs/applications/audio/helio-workstation/default.nix index 6378a97f31..012838eb43 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/helio-workstation/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/helio-workstation/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub -, alsaLib, freetype, xorg, curl, libGL, libjack2, gnome +, alsa-lib, freetype, xorg, curl, libGL, libjack2, gnome , pkg-config, makeWrapper }: @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ - alsaLib freetype xorg.libX11 xorg.libXext xorg.libXinerama xorg.libXrandr + alsa-lib freetype xorg.libX11 xorg.libXext xorg.libXinerama xorg.libXrandr xorg.libXcursor xorg.libXcomposite curl libGL libjack2 gnome.zenity ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/helm/default.nix b/third_party/nixpkgs/pkgs/applications/audio/helm/default.nix index 172f134907..86497e090f 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/helm/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/helm/default.nix @@ -3,7 +3,7 @@ , fetchpatch , xorg , freetype -, alsaLib +, alsa-lib , curl , libjack2 , lv2 @@ -26,7 +26,7 @@ buildInputs = [ xorg.libX11 xorg.libXcomposite xorg.libXcursor xorg.libXext xorg.libXinerama xorg.libXrender xorg.libXrandr - freetype alsaLib curl libjack2 pkg-config libGLU libGL lv2 + freetype alsa-lib curl libjack2 pkg-config libGLU libGL lv2 ]; CXXFLAGS = "-DHAVE_LROUND"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/helvum/default.nix b/third_party/nixpkgs/pkgs/applications/audio/helvum/default.nix index 1ecf9c56e8..cc98e9fb35 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/helvum/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/helvum/default.nix @@ -13,17 +13,17 @@ rustPlatform.buildRustPackage rec { pname = "helvum"; - version = "0.2.0"; + version = "0.2.1"; src = fetchFromGitLab { domain = "gitlab.freedesktop.org"; owner = "ryuukyu"; repo = pname; rev = version; - sha256 = "sha256-sQ4epL3QNOLHuR/dr/amHgiaxV/1SWeb3eijnjAAR3w="; + sha256 = "sha256-ZnpdGXK8N8c/s4qC2NXcn0Pdqrqr47iOWvVwXD9pn1A="; }; - cargoSha256 = "sha256-uNTSU06Fz/ud04K40e98rb7o/uAht0DsiJOXeHX72vw="; + cargoSha256 = "sha256-2v2L20rUWftXdhhuE3wiRrDIuSg6VFxfpWYMRaMUyTU="; nativeBuildInputs = [ clang copyDesktopItems pkg-config ]; buildInputs = [ glib gtk4 pipewire ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/hqplayer-desktop/default.nix b/third_party/nixpkgs/pkgs/applications/audio/hqplayer-desktop/default.nix new file mode 100644 index 0000000000..2551c610c5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/audio/hqplayer-desktop/default.nix @@ -0,0 +1,91 @@ +{ mkDerivation +, alsa-lib +, autoPatchelfHook +, fetchurl +, flac +, lib +, libmicrohttpd +, llvmPackages_10 +, qtcharts +, qtdeclarative +, qtquickcontrols2 +, qtwebengine +, qtwebview +, rpmextract +, wavpack +}: + +mkDerivation rec { + pname = "hqplayer-desktop"; + version = "4.12.1-35"; + + src = fetchurl { + # FIXME: use the fc34 sources when we get glibc 2.33 in nixpkgs + # c.f. https://github.com/NixOS/nixpkgs/pull/111616 + url = "https://www.signalyst.eu/bins/hqplayer/fc33/hqplayer4desktop-${version}.fc33.x86_64.rpm"; + sha256 = "sha256-DLnZNX+uAan9dhPLMvINeXsIn3Yv2CgsvyTcX0hbEK8="; + }; + + unpackPhase = '' + ${rpmextract}/bin/rpmextract $src + ''; + + nativeBuildInputs = [ autoPatchelfHook rpmextract ]; + + buildInputs = [ + alsa-lib + flac + libmicrohttpd + llvmPackages_10.openmp + qtquickcontrols2 + qtcharts + qtdeclarative + qtwebengine + qtwebview + wavpack + ]; + + dontConfigure = true; + dontBuild = true; + + installPhase = '' + runHook preInstall + + # main executable + mkdir -p $out/bin + cp ./usr/bin/* $out/bin + + # desktop files + mkdir -p $out/share/applications + cp ./usr/share/applications/* $out/share/applications + + # documentation + mkdir -p $out/share/doc/${pname} + cp ./usr/share/doc/hqplayer4desktop/* $out/share/doc/${pname} + + # pixmaps + mkdir -p $out/share/pixmaps + cp ./usr/share/pixmaps/* $out/share/pixmaps + + runHook postInstall + ''; + + postInstall = '' + for desktopFile in $out/share/applications/*; do + substituteInPlace "$desktopFile" \ + --replace /usr/bin/ $out/bin/ \ + --replace /usr/share/doc/ $out/share/doc/ + done + ''; + + postFixup = '' + patchelf --replace-needed libomp.so.5 libomp.so $out/bin/.hqplayer4desktop-wrapped + ''; + + meta = with lib; { + homepage = "https://www.signalyst.com/custom.html"; + description = "High-end upsampling multichannel software HD-audio player"; + license = licenses.unfree; + maintainers = with maintainers; [ lovesegfault ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/audio/hybridreverb2/default.nix b/third_party/nixpkgs/pkgs/applications/audio/hybridreverb2/default.nix index b887615a30..c539a31642 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/hybridreverb2/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/hybridreverb2/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, fetchzip, cmake, pkg-config, lv2, alsaLib, libjack2, +{ lib, stdenv, fetchFromGitHub, fetchzip, cmake, pkg-config, lv2, alsa-lib, libjack2, freetype, libX11, gtk3, pcre, libpthreadstubs, libXdmcp, libxkbcommon, epoxy, at-spi2-core, dbus, curl, fftwFloat }: @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config cmake ]; - buildInputs = [ lv2 alsaLib libjack2 freetype libX11 gtk3 pcre + buildInputs = [ lv2 alsa-lib libjack2 freetype libX11 gtk3 pcre libpthreadstubs libXdmcp libxkbcommon epoxy at-spi2-core dbus curl fftwFloat ]; cmakeFlags = [ diff --git a/third_party/nixpkgs/pkgs/applications/audio/hydrogen/0.nix b/third_party/nixpkgs/pkgs/applications/audio/hydrogen/0.nix index 1746715b83..ad3566571b 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/hydrogen/0.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/hydrogen/0.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, pkg-config, cmake -, alsaLib, boost, glib, lash, libjack2, libarchive, libsndfile, lrdf, qt4 +, alsa-lib, boost, glib, lash, libjack2, libarchive, libsndfile, lrdf, qt4 }: stdenv.mkDerivation rec { @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config cmake ]; buildInputs = [ - alsaLib boost glib lash libjack2 libarchive libsndfile lrdf qt4 + alsa-lib boost glib lash libjack2 libarchive libsndfile lrdf qt4 ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/audio/hydrogen/default.nix b/third_party/nixpkgs/pkgs/applications/audio/hydrogen/default.nix index 490591ec9e..319ee7a5f9 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/hydrogen/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/hydrogen/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, cmake, pkg-config, wrapQtAppsHook -, alsaLib, ladspa-sdk, lash, libarchive, libjack2, liblo, libpulseaudio, libsndfile, lrdf +, alsa-lib, ladspa-sdk, lash, libarchive, libjack2, liblo, libpulseaudio, libsndfile, lrdf , qtbase, qttools, qtxmlpatterns }: @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config wrapQtAppsHook ]; buildInputs = [ - alsaLib ladspa-sdk lash libarchive libjack2 liblo libpulseaudio libsndfile lrdf + alsa-lib ladspa-sdk lash libarchive libjack2 liblo libpulseaudio libsndfile lrdf qtbase qttools qtxmlpatterns ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/iannix/default.nix b/third_party/nixpkgs/pkgs/applications/audio/iannix/default.nix index 304f67e85a..f37150994f 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/iannix/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/iannix/default.nix @@ -1,4 +1,4 @@ -{ mkDerivation, lib, fetchFromGitHub, alsaLib, pkg-config, qtbase, qtscript, qmake +{ mkDerivation, lib, fetchFromGitHub, alsa-lib, pkg-config, qtbase, qtscript, qmake }: mkDerivation rec { @@ -13,7 +13,7 @@ mkDerivation rec { }; nativeBuildInputs = [ pkg-config qmake ]; - buildInputs = [ alsaLib qtbase qtscript ]; + buildInputs = [ alsa-lib qtbase qtscript ]; qmakeFlags = [ "PREFIX=/" ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/industrializer/default.nix b/third_party/nixpkgs/pkgs/applications/audio/industrializer/default.nix index f638eba321..91f7175e39 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/industrializer/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/industrializer/default.nix @@ -1,6 +1,6 @@ { lib, stdenv , fetchurl -, alsaLib +, alsa-lib , audiofile , autoconf , automake @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; buildInputs = [ - alsaLib + alsa-lib audiofile autoconf automake diff --git a/third_party/nixpkgs/pkgs/applications/audio/jaaa/default.nix b/third_party/nixpkgs/pkgs/applications/audio/jaaa/default.nix index 035e15abb2..48ffd5df51 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/jaaa/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/jaaa/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, libclthreads, libclxclient, libX11, libXft, libXrender, fftwFloat, libjack2, zita-alsa-pcmi }: +{ lib, stdenv, fetchurl, alsa-lib, libclthreads, libclxclient, libX11, libXft, libXrender, fftwFloat, libjack2, zita-alsa-pcmi }: stdenv.mkDerivation rec { pname = "jaaa"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ - alsaLib libclthreads libclxclient libX11 libXft libXrender fftwFloat libjack2 zita-alsa-pcmi + alsa-lib libclthreads libclxclient libX11 libXft libXrender fftwFloat libjack2 zita-alsa-pcmi ]; makeFlags = [ diff --git a/third_party/nixpkgs/pkgs/applications/audio/jack-rack/default.nix b/third_party/nixpkgs/pkgs/applications/audio/jack-rack/default.nix index ec62cb04c8..520b55e96d 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/jack-rack/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/jack-rack/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, pkg-config, libjack2, ladspaH, gtk2, alsaLib, libxml2, lrdf }: +{ lib, stdenv, fetchurl, pkg-config, libjack2, ladspaH, gtk2, alsa-lib, libxml2, lrdf }: stdenv.mkDerivation rec { name = "jack-rack-1.4.7"; src = fetchurl { @@ -6,7 +6,7 @@ stdenv.mkDerivation rec { sha256 = "1lmibx9gicagcpcisacj6qhq6i08lkl5x8szysjqvbgpxl9qg045"; }; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ libjack2 ladspaH gtk2 alsaLib libxml2 lrdf ]; + buildInputs = [ libjack2 ladspaH gtk2 alsa-lib libxml2 lrdf ]; NIX_LDFLAGS = "-ldl -lm -lpthread"; meta = { diff --git a/third_party/nixpkgs/pkgs/applications/audio/jackmix/default.nix b/third_party/nixpkgs/pkgs/applications/audio/jackmix/default.nix index eecafe9e50..e9d2abee91 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/jackmix/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/jackmix/default.nix @@ -1,4 +1,4 @@ -{ mkDerivation, lib, fetchFromGitHub, pkg-config, sconsPackages, qtbase, lash, libjack2, jack ? libjack2, alsaLib }: +{ mkDerivation, lib, fetchFromGitHub, pkg-config, sconsPackages, qtbase, lash, libjack2, jack ? libjack2, alsa-lib }: mkDerivation rec { pname = "jackmix"; @@ -18,7 +18,7 @@ mkDerivation rec { qtbase lash jack - alsaLib + alsa-lib ]; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/audio/jamulus/default.nix b/third_party/nixpkgs/pkgs/applications/audio/jamulus/default.nix index bf054b118e..185df48ff6 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/jamulus/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/jamulus/default.nix @@ -3,12 +3,12 @@ mkDerivation rec { pname = "jamulus"; - version = "3.7.0"; + version = "3.8.0"; src = fetchFromGitHub { owner = "jamulussoftware"; repo = "jamulus"; rev = "r${lib.replaceStrings [ "." ] [ "_" ] version}"; - sha256 = "sha256-8zCPT0jo4ExgmZWxGinumv3JauH4csM9DtuHmOiJQAM="; + sha256 = "sha256-Ni6N7XW34OFNuEkqBEgMcYGmIqb+UZ0uhLt/shRkWRs="; }; nativeBuildInputs = [ pkg-config qmake ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/japa/default.nix b/third_party/nixpkgs/pkgs/applications/audio/japa/default.nix index f45395eefa..016f515ce1 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/japa/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/japa/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, libjack2, fftwFloat, libclthreads, libclxclient, libX11, libXft, zita-alsa-pcmi, }: +{ lib, stdenv, fetchurl, alsa-lib, libjack2, fftwFloat, libclthreads, libclxclient, libX11, libXft, zita-alsa-pcmi, }: stdenv.mkDerivation rec { version = "0.9.2"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "1zmi4wg23hwsypg3h6y3qb72cbrihqcs19qrbzgs5a67d13q4897"; }; - buildInputs = [ alsaLib libjack2 fftwFloat libclthreads libclxclient libX11 libXft zita-alsa-pcmi ]; + buildInputs = [ alsa-lib libjack2 fftwFloat libclthreads libclxclient libX11 libXft zita-alsa-pcmi ]; preConfigure = '' cd ./source/ diff --git a/third_party/nixpkgs/pkgs/applications/audio/kmetronome/default.nix b/third_party/nixpkgs/pkgs/applications/audio/kmetronome/default.nix index 51c853809f..70b06e72fb 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/kmetronome/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/kmetronome/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, cmake, pkg-config, qttools, alsaLib, drumstick, qtbase, qtsvg }: +{ lib, stdenv, fetchurl, cmake, pkg-config, qttools, alsa-lib, drumstick, qtbase, qtsvg }: stdenv.mkDerivation rec { pname = "kmetronome"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config qttools ]; - buildInputs = [ alsaLib drumstick qtbase qtsvg ]; + buildInputs = [ alsa-lib drumstick qtbase qtsvg ]; dontWrapQtApps = true; diff --git a/third_party/nixpkgs/pkgs/applications/audio/lash/default.nix b/third_party/nixpkgs/pkgs/applications/audio/lash/default.nix index 74bbeb9b7b..6c8ea6528f 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/lash/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/lash/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, gtk2, libjack2, libuuid, libxml2 +{ lib, stdenv, fetchurl, alsa-lib, gtk2, libjack2, libuuid, libxml2 , makeWrapper, pkg-config, readline }: assert libuuid != null; @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { patches = [ ./socket.patch ./gcc-47.patch ]; nativeBuildInputs = [ pkg-config makeWrapper ]; - buildInputs = [ alsaLib gtk2 libjack2 libxml2 readline ]; + buildInputs = [ alsa-lib gtk2 libjack2 libxml2 readline ]; propagatedBuildInputs = [ libuuid ]; NIX_LDFLAGS = "-lm -lpthread -luuid"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/librespot/default.nix b/third_party/nixpkgs/pkgs/applications/audio/librespot/default.nix index 858d8e795e..61f709b33e 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/librespot/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/librespot/default.nix @@ -1,5 +1,5 @@ { lib, fetchFromGitHub, rustPlatform, pkg-config, openssl, withRodio ? true -, withALSA ? true, alsaLib ? null, withPulseAudio ? false, libpulseaudio ? null +, withALSA ? true, alsa-lib ? null, withPulseAudio ? false, libpulseaudio ? null , withPortAudio ? false, portaudio ? null }: rustPlatform.buildRustPackage rec { @@ -30,7 +30,7 @@ rustPlatform.buildRustPackage rec { nativeBuildInputs = [ pkg-config ]; - buildInputs = [ openssl ] ++ lib.optional withALSA alsaLib + buildInputs = [ openssl ] ++ lib.optional withALSA alsa-lib ++ lib.optional withPulseAudio libpulseaudio ++ lib.optional withPortAudio portaudio; diff --git a/third_party/nixpkgs/pkgs/applications/audio/lingot/default.nix b/third_party/nixpkgs/pkgs/applications/audio/lingot/default.nix index 17a28315f1..22cab165cc 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/lingot/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/lingot/default.nix @@ -4,7 +4,7 @@ , intltool , gtk3 , wrapGAppsHook -, alsaLib +, alsa-lib , libjack2 , libpulseaudio , fftw @@ -28,7 +28,7 @@ stdenv.mkDerivation rec { buildInputs = [ gtk3 - alsaLib + alsa-lib libpulseaudio fftw ] ++ lib.optional jackSupport libjack2; diff --git a/third_party/nixpkgs/pkgs/applications/audio/linuxsampler/default.nix b/third_party/nixpkgs/pkgs/applications/audio/linuxsampler/default.nix index 91f14879dc..1c33bff5b7 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/linuxsampler/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/linuxsampler/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, autoconf, automake, bison, libtool, pkg-config, which -, alsaLib, asio, libjack2, libgig, libsndfile, lv2 }: +, alsa-lib, asio, libjack2, libgig, libsndfile, lv2 }: stdenv.mkDerivation rec { pname = "linuxsampler"; @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoconf automake bison libtool pkg-config which ]; - buildInputs = [ alsaLib asio libjack2 libgig libsndfile lv2 ]; + buildInputs = [ alsa-lib asio libjack2 libgig libsndfile lv2 ]; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/applications/audio/lmms/default.nix b/third_party/nixpkgs/pkgs/applications/audio/lmms/default.nix index 11a7d0cf3c..f791ad51bf 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/lmms/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/lmms/default.nix @@ -1,4 +1,4 @@ -{ lib, fetchFromGitHub, cmake, pkg-config, alsaLib ? null, fftwFloat, fltk13 +{ lib, fetchFromGitHub, cmake, pkg-config, alsa-lib ? null, fftwFloat, fltk13 , fluidsynth_1 ? null, lame ? null, libgig ? null, libjack2 ? null, libpulseaudio ? null , libsamplerate, libsoundio ? null, libsndfile, libvorbis ? null, portaudio ? null , qtbase, qtx11extras, qttools, SDL ? null, mkDerivation }: @@ -18,7 +18,7 @@ mkDerivation rec { nativeBuildInputs = [ cmake qttools pkg-config ]; buildInputs = [ - alsaLib + alsa-lib fftwFloat fltk13 fluidsynth_1 diff --git a/third_party/nixpkgs/pkgs/applications/audio/lsp-plugins/default.nix b/third_party/nixpkgs/pkgs/applications/audio/lsp-plugins/default.nix index e3f92d2da7..2bf47786ef 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/lsp-plugins/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/lsp-plugins/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { pname = "lsp-plugins"; - version = "1.1.26"; + version = "1.1.30"; src = fetchFromGitHub { owner = "sadko4u"; repo = pname; - rev = "${pname}-${version}"; - sha256 = "1apw8zh3a3il4smkjji6bih4vbsymj0hjs10fgkrd4nazqkjvgyd"; + rev = version; + sha256 = "0g0nx05dyjwz2149v3pj6sa9divr26jyqvg2kk1qk48s2n4najkz"; }; nativeBuildInputs = [ pkg-config php makeWrapper ]; @@ -36,6 +36,8 @@ stdenv.mkDerivation rec { buildFlags = [ "release" ]; + enableParallelBuilding = true; + meta = with lib; { description = "Collection of open-source audio plugins"; longDescription = '' @@ -84,6 +86,8 @@ stdenv.mkDerivation rec { - Compressor MidSide - Kompressor MidSide - Compressor Mono - Kompressor Mono - Compressor Stereo - Kompressor Stereo + - Artistic Delay Mono - Künstlerische Verzögerung + - Artistic Delay Stereo - Künstlerische Verzögerung - Latency Meter - Latenzmessgerät - Loudness Compensator Mono - Lautstärke Kompensator Mono - Loudness Compensator Stereo - Lautstärke Kompensator Stereo @@ -99,6 +103,9 @@ stdenv.mkDerivation rec { - Multiband Compressor MidSide x8 - Multi-band Kompressor MidSide x8 - Multiband Compressor Mono x8 - Multi-band Kompressor Mono x8 - Multiband Compressor Stereo x8 - Multi-band Kompressor Stereo x8 + - Oscilloscope x1 - Oscilloscope x1 + - Oscilloscope x2 - Oscilloscope x2 + - Oscilloscope x4 - Oscilloscope x4 - Oscillator Mono - Oszillator Mono - Parametric Equalizer x16 LeftRight - Parametrischer Entzerrer x16 LeftRight - Parametric Equalizer x16 MidSide - Parametrischer Entzerrer x16 MidSide diff --git a/third_party/nixpkgs/pkgs/applications/audio/mamba/default.nix b/third_party/nixpkgs/pkgs/applications/audio/mamba/default.nix index 04d5bb0a6d..6f518dac9c 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/mamba/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/mamba/default.nix @@ -6,7 +6,7 @@ , fluidsynth , libX11 , libjack2 -, alsaLib +, alsa-lib , liblo , libsigcxx , libsmf @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config xxd ]; - buildInputs = [ cairo fluidsynth libX11 libjack2 alsaLib liblo libsigcxx libsmf ]; + buildInputs = [ cairo fluidsynth libX11 libjack2 alsa-lib liblo libsigcxx libsmf ]; makeFlags = [ "PREFIX=$(out)" ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/mhwaveedit/default.nix b/third_party/nixpkgs/pkgs/applications/audio/mhwaveedit/default.nix index 82f9b70c61..e6b21dff2d 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/mhwaveedit/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/mhwaveedit/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, makeWrapper, SDL, alsaLib, autoreconfHook, gtk2, libjack2, ladspaH +{ lib, stdenv, fetchFromGitHub, makeWrapper, SDL, alsa-lib, autoreconfHook, gtk2, libjack2, ladspaH , ladspaPlugins, libsamplerate, libsndfile, pkg-config, libpulseaudio, lame , vorbis-tools }: @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { preAutoreconf = "(cd docgen && sh gendocs.sh)"; buildInputs = [ - SDL alsaLib gtk2 libjack2 ladspaH libsamplerate libsndfile libpulseaudio + SDL alsa-lib gtk2 libjack2 ladspaH libsamplerate libsndfile libpulseaudio ]; configureFlags = [ "--with-default-ladspa-path=${ladspaPlugins}/lib/ladspa" ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/mid2key/default.nix b/third_party/nixpkgs/pkgs/applications/audio/mid2key/default.nix index 2e72a01192..5db17b99d1 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/mid2key/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/mid2key/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, libX11, libXi, libXtst, xorgproto }: +{ lib, stdenv, fetchurl, alsa-lib, libX11, libXi, libXtst, xorgproto }: stdenv.mkDerivation rec { name = "mid2key-r1"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { unpackPhase = "tar xvzf $src"; - buildInputs = [ alsaLib libX11 libXi libXtst xorgproto ]; + buildInputs = [ alsa-lib libX11 libXi libXtst xorgproto ]; buildPhase = "make"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/midas/generic.nix b/third_party/nixpkgs/pkgs/applications/audio/midas/generic.nix index 8f2e29ee95..93a215e46b 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/midas/generic.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/midas/generic.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, lib, libX11, libXext, alsaLib, freetype, brand, type, version, homepage, url, sha256, ... }: +{ stdenv, fetchurl, lib, libX11, libXext, alsa-lib, freetype, brand, type, version, homepage, url, sha256, ... }: stdenv.mkDerivation rec { inherit type; baseName = "${type}-Edit"; @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { libPath = lib.makeLibraryPath [ libX11 # libX11.so.6 libXext # libXext.so.6 - alsaLib # libasound.so.2 + alsa-lib # libasound.so.2 freetype # libfreetype.so.6 stdenv.cc.cc.lib # libstdc++.so.6 ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/milkytracker/default.nix b/third_party/nixpkgs/pkgs/applications/audio/milkytracker/default.nix index b43694eb9c..ce29a587d2 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/milkytracker/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/milkytracker/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, cmake, pkg-config, makeWrapper -, SDL2, alsaLib, libjack2, lhasa, perl, rtmidi, zlib, zziplib }: +, SDL2, alsa-lib, libjack2, lhasa, perl, rtmidi, zlib, zziplib }: stdenv.mkDerivation rec { version = "1.03.00"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config makeWrapper ]; - buildInputs = [ SDL2 alsaLib libjack2 lhasa perl rtmidi zlib zziplib ]; + buildInputs = [ SDL2 alsa-lib libjack2 lhasa perl rtmidi zlib zziplib ]; # Somehow this does not get set automatically cmakeFlags = [ "-DSDL2MAIN_LIBRARY=${SDL2}/lib/libSDL2.so" ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/mimic/default.nix b/third_party/nixpkgs/pkgs/applications/audio/mimic/default.nix index 57af7a469a..5ed51a9989 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/mimic/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/mimic/default.nix @@ -1,5 +1,5 @@ { config, lib, stdenv, autoreconfHook, fetchFromGitHub, pkg-config -, alsaLib, libtool, icu +, alsa-lib, libtool, icu , pulseaudioSupport ? config.pulseaudio or false, libpulseaudio }: stdenv.mkDerivation rec { @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib libtool icu ] ++ lib.optional pulseaudioSupport libpulseaudio; diff --git a/third_party/nixpkgs/pkgs/applications/audio/miniaudicle/default.nix b/third_party/nixpkgs/pkgs/applications/audio/miniaudicle/default.nix index 9c49f26bb4..90821b0147 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/miniaudicle/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/miniaudicle/default.nix @@ -4,7 +4,7 @@ , bison , flex , which -, alsaLib +, alsa-lib , libsndfile , qt4 , qscintilla @@ -36,7 +36,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib libsndfile qt4 qscintilla diff --git a/third_party/nixpkgs/pkgs/applications/audio/moc/default.nix b/third_party/nixpkgs/pkgs/applications/audio/moc/default.nix index 783ef2dbb7..1d26782b6a 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/moc/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/moc/default.nix @@ -1,7 +1,7 @@ { lib, stdenv, fetchurl, pkg-config , ncurses, db , popt, libtool # Sound sub-systems -, alsaSupport ? true, alsaLib +, alsaSupport ? true, alsa-lib , pulseSupport ? true, libpulseaudio, autoreconfHook , jackSupport ? true, libjack2 , ossSupport ? true @@ -46,7 +46,7 @@ in stdenv.mkDerivation rec { buildInputs = [ ncurses db popt libtool ] # Sound sub-systems - ++ opt alsaSupport alsaLib + ++ opt alsaSupport alsa-lib ++ opt pulseSupport libpulseaudio ++ opt jackSupport libjack2 # Audio formats diff --git a/third_party/nixpkgs/pkgs/applications/audio/mousai/default.nix b/third_party/nixpkgs/pkgs/applications/audio/mousai/default.nix index 687546624b..2f45a3fea9 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/mousai/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/mousai/default.nix @@ -1,6 +1,7 @@ { lib , python3 , fetchFromGitHub +, fetchpatch , appstream-glib , desktop-file-utils , gettext @@ -29,6 +30,14 @@ python3.pkgs.buildPythonApplication rec { sha256 = "sha256-AfR5n1dIm9X5OoPiikQEhHBFQq0rmQH4h7cCJ2yXoXI="; }; + patches = [ + (fetchpatch { + name = "fix-ABI-breakage-from-libadwaita.patch"; + url = "https://github.com/SeaDve/Mousai/commit/e3db2d9d1949300f49399209b56d667746e539df.patch"; + sha256 = "078kvmyhw4jd1m2npai0yl00lwh47jys2n03pkgxp6jf873y83vs"; + }) + ]; + postPatch = '' patchShebangs build-aux/meson ''; diff --git a/third_party/nixpkgs/pkgs/applications/audio/mpg123/default.nix b/third_party/nixpkgs/pkgs/applications/audio/mpg123/default.nix index 153e8b9940..8f9489befc 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/mpg123/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/mpg123/default.nix @@ -1,7 +1,7 @@ { lib, stdenv , fetchurl , makeWrapper -, alsaLib +, alsa-lib , perl , withConplay ? !stdenv.targetPlatform.isWindows }: @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = lib.optionals withConplay [ makeWrapper ]; buildInputs = lib.optionals withConplay [ perl ] - ++ lib.optionals (!stdenv.isDarwin && !stdenv.targetPlatform.isWindows) [ alsaLib ]; + ++ lib.optionals (!stdenv.isDarwin && !stdenv.targetPlatform.isWindows) [ alsa-lib ]; configureFlags = lib.optional (stdenv.hostPlatform ? mpg123) diff --git a/third_party/nixpkgs/pkgs/applications/audio/mpg321/default.nix b/third_party/nixpkgs/pkgs/applications/audio/mpg321/default.nix index 37f647a4a4..03aee52f2a 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/mpg321/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/mpg321/default.nix @@ -1,4 +1,4 @@ -{lib, stdenv, fetchurl, fetchpatch, libao, libmad, libid3tag, zlib, alsaLib +{lib, stdenv, fetchurl, fetchpatch, libao, libmad, libid3tag, zlib, alsa-lib # Specify default libao output plugin to use (e.g. "alsa", "pulse" …). # If null, it will use the libao system default. , defaultAudio ? null @@ -29,7 +29,7 @@ stdenv.mkDerivation rec { "--with-default-audio=${defaultAudio}"); buildInputs = [libao libid3tag libmad zlib] - ++ lib.optional stdenv.isLinux alsaLib; + ++ lib.optional stdenv.isLinux alsa-lib; installTargets = [ "install" "install-man" ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/munt/default.nix b/third_party/nixpkgs/pkgs/applications/audio/munt/default.nix index da8dcb0b0c..191612700f 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/munt/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/munt/default.nix @@ -1,38 +1,51 @@ -{ lib, mkDerivation, fetchFromGitHub, cmake, qtbase, alsaLib, makeDesktopItem, libjack2 }: +{ lib +, mkDerivation +, stdenv +, fetchFromGitHub +, makeDesktopItem +, cmake +, pkg-config +, qtbase +, glib +, alsa-lib +, withJack ? stdenv.hostPlatform.isUnix, jack +}: let - desktopItem = makeDesktopItem rec { - name = "Munt"; - exec = "mt32emu-qt"; - desktopName = name; - genericName = "Munt synthesiser"; - categories = "Audio;AudioVideo;"; - }; -in mkDerivation rec { - version = "2.4.1"; + mainProgram = "mt32emu-qt"; +in +mkDerivation rec { pname = "munt"; + version = "2.5.0"; src = fetchFromGitHub { owner = pname; repo = pname; - rev = with lib.versions; "libmt32emu_${major version}_${minor version}_${patch version}"; - sha256 = "0bszhkbz24hhx32f973l6h5lkyn4lxhqrckiwmv765d1sba8n5bk"; + rev = "munt_${lib.replaceChars [ "." ] [ "_" ] version}"; + sha256 = "1lknq2a72gv1ddhzr7f967wpa12lh805jj4gjacdnamgrc1h22yn"; }; - postInstall = '' - ln -s ${desktopItem}/share/applications $out/share - ''; - dontFixCmake = true; - nativeBuildInputs = [ cmake ]; - buildInputs = [ qtbase alsaLib libjack2 ]; + nativeBuildInputs = [ cmake pkg-config ]; + + buildInputs = [ qtbase glib ] + ++ lib.optional stdenv.hostPlatform.isLinux alsa-lib + ++ lib.optional withJack jack; + + postInstall = lib.optionalString stdenv.hostPlatform.isDarwin '' + mkdir $out/Applications + mv $out/bin/${mainProgram}.app $out/Applications/ + wrapQtApp $out/Applications/${mainProgram}.app/Contents/MacOS/${mainProgram} + ln -s $out/{Applications/${mainProgram}.app/Contents/MacOS,bin}/${mainProgram} + ''; meta = with lib; { + inherit mainProgram; description = "Multi-platform software synthesiser emulating Roland MT-32, CM-32L, CM-64 and LAPC-I devices"; homepage = "http://munt.sourceforge.net/"; license = with licenses; [ lgpl21 gpl3 ]; - platforms = platforms.linux; - maintainers = with maintainers; [ ]; + platforms = platforms.all; + maintainers = with maintainers; [ OPNA2608 ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/audio/muse/default.nix b/third_party/nixpkgs/pkgs/applications/audio/muse/default.nix index 22d66b18dd..f5a6bafe79 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/muse/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/muse/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, cmake, pkg-config, qttools, wrapQtAppsHook -, alsaLib, dssi, fluidsynth, ladspaH, lash, libinstpatch, libjack2, liblo +, alsa-lib, dssi, fluidsynth, ladspaH, lash, libinstpatch, libjack2, liblo , libsamplerate, libsndfile, lilv, lrdf, lv2, qtsvg, rtaudio, rubberband, sord }: @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config qttools wrapQtAppsHook ]; buildInputs = [ - alsaLib dssi fluidsynth ladspaH lash libinstpatch libjack2 liblo + alsa-lib dssi fluidsynth ladspaH lash libinstpatch libjack2 liblo libsamplerate libsndfile lilv lrdf lv2 qtsvg rtaudio rubberband sord ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/musescore/default.nix b/third_party/nixpkgs/pkgs/applications/audio/musescore/default.nix index b43b770b24..c2a2e7b960 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/musescore/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/musescore/default.nix @@ -1,5 +1,5 @@ { mkDerivation, lib, fetchFromGitHub, cmake, pkg-config -, alsaLib, freetype, libjack2, lame, libogg, libpulseaudio, libsndfile, libvorbis +, alsa-lib, freetype, libjack2, lame, libogg, libpulseaudio, libsndfile, libvorbis , portaudio, portmidi, qtbase, qtdeclarative, qtgraphicaleffects , qtquickcontrols2, qtscript, qtsvg, qttools , qtwebengine, qtxmlpatterns @@ -35,7 +35,7 @@ mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; buildInputs = [ - alsaLib libjack2 freetype lame libogg libpulseaudio libsndfile libvorbis + alsa-lib libjack2 freetype lame libogg libpulseaudio libsndfile libvorbis portaudio portmidi # tesseract qtbase qtdeclarative qtgraphicaleffects qtquickcontrols2 qtscript qtsvg qttools qtwebengine qtxmlpatterns diff --git a/third_party/nixpkgs/pkgs/applications/audio/musikcube/default.nix b/third_party/nixpkgs/pkgs/applications/audio/musikcube/default.nix index c8e18c03c1..2824832ef6 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/musikcube/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/musikcube/default.nix @@ -1,6 +1,6 @@ { cmake , pkg-config -, alsaLib +, alsa-lib , boost , curl , fetchFromGitHub @@ -31,7 +31,7 @@ stdenv.mkDerivation rec { pkg-config ]; buildInputs = [ - alsaLib + alsa-lib boost curl ffmpeg diff --git a/third_party/nixpkgs/pkgs/applications/audio/ncspot/default.nix b/third_party/nixpkgs/pkgs/applications/audio/ncspot/default.nix index aa56c98355..0a887ebaf3 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/ncspot/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/ncspot/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchFromGitHub, rustPlatform, pkg-config, ncurses, openssl, libiconv -, withALSA ? true, alsaLib ? null +, withALSA ? true, alsa-lib ? null , withPulseAudio ? false, libpulseaudio ? null , withPortAudio ? false, portaudio ? null , withMPRIS ? false, dbus ? null @@ -31,7 +31,7 @@ rustPlatform.buildRustPackage rec { buildInputs = [ ncurses openssl ] ++ lib.optional stdenv.isDarwin libiconv - ++ lib.optional withALSA alsaLib + ++ lib.optional withALSA alsa-lib ++ lib.optional withPulseAudio libpulseaudio ++ lib.optional withPortAudio portaudio ++ lib.optional withMPRIS dbus; diff --git a/third_party/nixpkgs/pkgs/applications/audio/netease-music-tui/default.nix b/third_party/nixpkgs/pkgs/applications/audio/netease-music-tui/default.nix index 61353f45fe..bf7d680ff1 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/netease-music-tui/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/netease-music-tui/default.nix @@ -1,4 +1,4 @@ -{ fetchFromGitHub, rustPlatform, lib, alsaLib, pkg-config, openssl }: +{ fetchFromGitHub, rustPlatform, lib, alsa-lib, pkg-config, openssl }: rustPlatform.buildRustPackage rec { pname = "netease-music-tui"; @@ -14,7 +14,7 @@ rustPlatform.buildRustPackage rec { cargoPatches = [ ./cargo-lock.patch ]; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib openssl ]; + buildInputs = [ alsa-lib openssl ]; cargoSha256 = "1pca0sz4rz8qls6k2vhf70ixhnvgk81c4hbx81q3pv106g5k205f"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/noisetorch/default.nix b/third_party/nixpkgs/pkgs/applications/audio/noisetorch/default.nix index 6f63bf542f..05e17bf7c9 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/noisetorch/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/noisetorch/default.nix @@ -1,42 +1,35 @@ -{ lib, buildGoModule, fetchFromGitHub, rnnoise-plugin }: +{ lib, buildGoModule, fetchFromGitHub, copyDesktopItems }: buildGoModule rec { pname = "NoiseTorch"; - version = "0.10.1"; + version = "0.11.3"; src = fetchFromGitHub { owner = "lawl"; repo = "NoiseTorch"; rev = version; - sha256 = "1a4g112h83m55pga8kq2a1wzxpycj59v4bygyjfyi1s09q1y97qg"; + sha256 = "0rjs6hbi7dvd179lzjmvqy4rv4pbc9amgzb8jfky4yc0zh8xf5z5"; }; - patches = [ - # Get version from environment instead of git tags - ./version.patch - ]; - vendorSha256 = null; doCheck = false; + ldflags = [ "-X main.version=${version}" "-X main.distribution=nix" ]; + subPackages = [ "." ]; - buildInputs = [ rnnoise-plugin ]; - - postPatch = "substituteInPlace main.go --replace 'librnnoise_ladspa/bin/ladspa/librnnoise_ladspa.so' '$RNNOISE_LADSPA_PLUGIN'"; + nativeBuildInputs = [ copyDesktopItems ]; preBuild = '' - export RNNOISE_LADSPA_PLUGIN="${rnnoise-plugin}/lib/ladspa/librnnoise_ladspa.so"; - go generate; + make -C c/ladspa/ + go generate rm ./scripts/* ''; postInstall = '' - mkdir -p $out/share/icons/hicolor/256x256/apps/ - cp assets/icon/noisetorch.png $out/share/icons/hicolor/256x256/apps/ - mkdir -p $out/share/applications/ - cp assets/noisetorch.desktop $out/share/applications/ + install -D ./assets/icon/noisetorch.png $out/share/icons/hicolor/256x256/apps/noisetorch.png + copyDesktopItems assets/noisetorch.desktop $out/share/applications/ ''; meta = with lib; { @@ -44,6 +37,6 @@ buildGoModule rec { homepage = "https://github.com/lawl/NoiseTorch"; license = licenses.gpl3Plus; platforms = platforms.linux; - maintainers = with maintainers; [ panaeon ]; + maintainers = with maintainers; [ panaeon legendofmiracles ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/audio/noisetorch/version.patch b/third_party/nixpkgs/pkgs/applications/audio/noisetorch/version.patch deleted file mode 100644 index 20c5186374..0000000000 --- a/third_party/nixpkgs/pkgs/applications/audio/noisetorch/version.patch +++ /dev/null @@ -1,37 +0,0 @@ -diff --git a/scripts/embedversion.go b/scripts/embedversion.go -index ce0a756..60e7a5e 100644 ---- a/scripts/embedversion.go -+++ b/scripts/embedversion.go -@@ -1,24 +1,18 @@ - package main - - import ( -- "os" -- "os/exec" -- "strings" -+ "os" -+ "strings" - ) - - func main() { -- cmd := exec.Command("git", "describe", "--tags") -- ret, err := cmd.Output() - -- if err != nil { -- panic("Couldn't read git tags to embed version number") -- } -- version := strings.TrimSpace(string(ret)) -+ version := strings.TrimSpace(string(os.Getenv("version"))) - -- out, _ := os.Create("version.go") -- defer out.Close() -+ out, _ := os.Create("version.go") -+ defer out.Close() - -- out.Write([]byte("package main\n\n//THIS FILE IS AUTOMATICALLY GENERATED BY `go generate` DO NOT EDIT!\n\nvar version=\"")) -- out.Write([]byte(version)) -- out.Write([]byte("\"\n")) -+ out.Write([]byte("package main\n\n//THIS FILE IS AUTOMATICALLY GENERATED BY `go generate` DO NOT EDIT!\n\nvar version=\"")) -+ out.Write([]byte(version)) -+ out.Write([]byte("\"\n")) - } diff --git a/third_party/nixpkgs/pkgs/applications/audio/nootka/default.nix b/third_party/nixpkgs/pkgs/applications/audio/nootka/default.nix index 11424c0be1..8b2284f9b3 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/nootka/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/nootka/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, cmake -, alsaLib, fftwSinglePrec, libjack2, libpulseaudio, libvorbis, soundtouch, qtbase +, alsa-lib, fftwSinglePrec, libjack2, libpulseaudio, libvorbis, soundtouch, qtbase }: stdenv.mkDerivation rec { @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; buildInputs = [ - alsaLib fftwSinglePrec libjack2 libpulseaudio libvorbis soundtouch qtbase + alsa-lib fftwSinglePrec libjack2 libpulseaudio libvorbis soundtouch qtbase ]; cmakeFlags = [ diff --git a/third_party/nixpkgs/pkgs/applications/audio/nootka/unstable.nix b/third_party/nixpkgs/pkgs/applications/audio/nootka/unstable.nix index aa49daaa1e..edfb194836 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/nootka/unstable.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/nootka/unstable.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, cmake -, alsaLib, fftwSinglePrec, libjack2, libpulseaudio, libvorbis, soundtouch +, alsa-lib, fftwSinglePrec, libjack2, libpulseaudio, libvorbis, soundtouch , qtbase, qtdeclarative, qtquickcontrols2 }: @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; buildInputs = [ - alsaLib fftwSinglePrec libjack2 libpulseaudio libvorbis soundtouch + alsa-lib fftwSinglePrec libjack2 libpulseaudio libvorbis soundtouch qtbase qtdeclarative qtquickcontrols2 ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/ocenaudio/default.nix b/third_party/nixpkgs/pkgs/applications/audio/ocenaudio/default.nix index 68edf99e01..7ad1e319bf 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/ocenaudio/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/ocenaudio/default.nix @@ -5,7 +5,7 @@ , dpkg , qt5 , libjack2 -, alsaLib +, alsa-lib , bzip2 , libpulseaudio }: @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { libjack2 libpulseaudio bzip2 - alsaLib + alsa-lib ]; buildInputs = [ dpkg ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/openmpt123/default.nix b/third_party/nixpkgs/pkgs/applications/audio/openmpt123/default.nix index a5ea91141c..5d18888951 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/openmpt123/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/openmpt123/default.nix @@ -1,19 +1,16 @@ { config, lib, stdenv, fetchurl, zlib, pkg-config, mpg123, libogg, libvorbis, portaudio, libsndfile, flac , usePulseAudio ? config.pulseaudio or false, libpulseaudio }: -let - version = "0.5.8"; -in stdenv.mkDerivation { +stdenv.mkDerivation rec { pname = "openmpt123"; - inherit version; + version = "0.5.9"; src = fetchurl { url = "https://lib.openmpt.org/files/libopenmpt/src/libopenmpt-${version}+release.autotools.tar.gz"; - sha256 = "sha256-KeLCEXS3P2fyul7naAjWLxgrEw5PcE7i2a6Cg5gtis0="; + sha256 = "0h86p8mnpm98vc4v6jbvrmm02fch7dnn332i26fg3a2s1738m04d"; }; enableParallelBuilding = true; - doCheck = true; nativeBuildInputs = [ pkg-config ]; buildInputs = [ zlib mpg123 libogg libvorbis portaudio libsndfile flac ] @@ -21,11 +18,13 @@ in stdenv.mkDerivation { configureFlags = lib.optional (!usePulseAudio) "--without-pulseaudio"; + doCheck = true; + meta = with lib; { description = "A cross-platform command-line based module file player"; homepage = "https://lib.openmpt.org/libopenmpt/"; license = licenses.bsd3; - maintainers = with maintainers; [ ]; - platforms = platforms.linux; + maintainers = with maintainers; [ OPNA2608 ]; + platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/applications/audio/osmid/default.nix b/third_party/nixpkgs/pkgs/applications/audio/osmid/default.nix index f16b146e61..1a65826dca 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/osmid/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/osmid/default.nix @@ -1,7 +1,7 @@ { lib, stdenv , fetchFromGitHub , cmake -, alsaLib +, alsa-lib , libX11 }: @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; - buildInputs = [ alsaLib libX11 ]; + buildInputs = [ alsa-lib libX11 ]; installPhase = '' runHook preInstall diff --git a/third_party/nixpkgs/pkgs/applications/audio/padthv1/default.nix b/third_party/nixpkgs/pkgs/applications/audio/padthv1/default.nix index f238a68760..90e80f13ac 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/padthv1/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/padthv1/default.nix @@ -1,4 +1,4 @@ -{ lib, fetchurl, pkg-config, libjack2, alsaLib, libsndfile, liblo, lv2, qt5, fftwFloat, mkDerivation }: +{ lib, fetchurl, pkg-config, libjack2, alsa-lib, libsndfile, liblo, lv2, qt5, fftwFloat, mkDerivation }: mkDerivation rec { pname = "padthv1"; @@ -9,7 +9,7 @@ mkDerivation rec { sha256 = "1karrprb3ijrbiwpr43rl3nxnzc33lnmwrd1832psgr3flnr9fp5"; }; - buildInputs = [ libjack2 alsaLib libsndfile liblo lv2 qt5.qtbase qt5.qttools fftwFloat ]; + buildInputs = [ libjack2 alsa-lib libsndfile liblo lv2 qt5.qtbase qt5.qttools fftwFloat ]; nativeBuildInputs = [ pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/patchage/default.nix b/third_party/nixpkgs/pkgs/applications/audio/patchage/default.nix index 573b2262e7..f37cf8c5b3 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/patchage/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/patchage/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, alsaLib, boost, dbus-glib, fetchsvn, ganv, glibmm +{ lib, stdenv, alsa-lib, boost, dbus-glib, fetchsvn, ganv, glibmm , gtkmm2, libjack2, pkg-config, python2, wafHook }: @@ -12,7 +12,7 @@ stdenv.mkDerivation { }; buildInputs = [ - alsaLib boost dbus-glib ganv glibmm gtkmm2 libjack2 + alsa-lib boost dbus-glib ganv glibmm gtkmm2 libjack2 pkg-config python2 wafHook ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/petrifoo/default.nix b/third_party/nixpkgs/pkgs/applications/audio/petrifoo/default.nix index fb29f9b13e..f76720aff9 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/petrifoo/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/petrifoo/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, cmake, gtk2, libjack2, libgnomecanvas +{ lib, stdenv, fetchurl, alsa-lib, cmake, gtk2, libjack2, libgnomecanvas , libpthreadstubs, libsamplerate, libsndfile, libtool, libxml2 , pkg-config, openssl }: @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; - buildInputs = [ alsaLib gtk2 libjack2 libgnomecanvas libpthreadstubs + buildInputs = [ alsa-lib gtk2 libjack2 libgnomecanvas libpthreadstubs libsamplerate libsndfile libtool libxml2 openssl ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/audio/pianobooster/default.nix b/third_party/nixpkgs/pkgs/applications/audio/pianobooster/default.nix index f1d35d7e78..2c58ecc5dc 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/pianobooster/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/pianobooster/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, cmake, pkg-config, qttools -, alsaLib, ftgl, libGLU, libjack2, qtbase, rtmidi, wrapQtAppsHook +, alsa-lib, ftgl, libGLU, libjack2, qtbase, rtmidi, wrapQtAppsHook }: stdenv.mkDerivation rec { @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config qttools wrapQtAppsHook ]; - buildInputs = [ alsaLib ftgl libGLU libjack2 qtbase rtmidi ]; + buildInputs = [ alsa-lib ftgl libGLU libjack2 qtbase rtmidi ]; cmakeFlags = [ "-DOpenGL_GL_PREFERENCE=GLVND" diff --git a/third_party/nixpkgs/pkgs/applications/audio/picard/default.nix b/third_party/nixpkgs/pkgs/applications/audio/picard/default.nix index 28d0ae6f5f..49aa0ba471 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/picard/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/picard/default.nix @@ -18,13 +18,13 @@ let in pythonPackages.buildPythonApplication rec { pname = "picard"; - version = "2.6.2"; + version = "2.6.3"; src = fetchFromGitHub { owner = "metabrainz"; repo = pname; rev = "release-${version}"; - sha256 = "1dhkdzc3601rhg8pqljbv3dz7j0mx75brpfhlizhgwgv65qk3ifj"; + sha256 = "sha256-bSqGgRXqHGjT+OYCEafsT/btVe+n91+L0kB8fnrywss="; }; nativeBuildInputs = [ gettext qt5.wrapQtAppsHook qt5.qtbase ] diff --git a/third_party/nixpkgs/pkgs/applications/audio/picoloop/default.nix b/third_party/nixpkgs/pkgs/applications/audio/picoloop/default.nix index 519888982c..bd956963a4 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/picoloop/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/picoloop/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, libpulseaudio, SDL2, SDL2_image, SDL2_ttf, alsaLib, libjack2 }: +{ lib, stdenv, fetchFromGitHub, libpulseaudio, SDL2, SDL2_image, SDL2_ttf, alsa-lib, libjack2 }: stdenv.mkDerivation rec { pname = "picoloop"; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { SDL2.dev SDL2_image SDL2_ttf - alsaLib + alsa-lib libjack2 ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/pmidi/default.nix b/third_party/nixpkgs/pkgs/applications/audio/pmidi/default.nix index 28e9788acb..43f38ff84e 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/pmidi/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/pmidi/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib +{ lib, stdenv, fetchurl, alsa-lib , version ? "1.7.1" , sourceSha256 ? "051mv6f13c8y13c1iv3279k1hhzpz4fm9sfczhgp9sim2bjdj055" }: @@ -11,7 +11,7 @@ stdenv.mkDerivation { sha256 = sourceSha256; }; - buildInputs = [ alsaLib ]; + buildInputs = [ alsa-lib ]; meta = with lib; { homepage = "https://www.parabola.me.uk/alsa/pmidi.html"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/polyphone/default.nix b/third_party/nixpkgs/pkgs/applications/audio/polyphone/default.nix index a331952aa8..4656db7257 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/polyphone/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/polyphone/default.nix @@ -1,4 +1,4 @@ -{ lib, mkDerivation, fetchFromGitHub, qmake, pkg-config, alsaLib, libjack2, portaudio, libogg, flac, libvorbis, rtmidi, qtsvg }: +{ lib, mkDerivation, fetchFromGitHub, qmake, pkg-config, alsa-lib, libjack2, portaudio, libogg, flac, libvorbis, rtmidi, qtsvg }: mkDerivation rec { version = "2.2.0"; @@ -12,7 +12,7 @@ mkDerivation rec { }; buildInputs = [ - alsaLib + alsa-lib libjack2 portaudio libogg diff --git a/third_party/nixpkgs/pkgs/applications/audio/praat/default.nix b/third_party/nixpkgs/pkgs/applications/audio/praat/default.nix index 1d3fd534dd..239b62a402 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/praat/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/praat/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, gtk2, pkg-config }: +{ lib, stdenv, fetchurl, alsa-lib, gtk2, pkg-config }: stdenv.mkDerivation rec { pname = "praat"; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { ''; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib gtk2 ]; + buildInputs = [ alsa-lib gtk2 ]; meta = { description = "Doing phonetics by computer"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/pt2-clone/default.nix b/third_party/nixpkgs/pkgs/applications/audio/pt2-clone/default.nix index 72e8ba135d..9092ae0b91 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/pt2-clone/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/pt2-clone/default.nix @@ -2,23 +2,23 @@ , fetchFromGitHub , cmake , nixosTests -, alsaLib +, alsa-lib , SDL2 }: stdenv.mkDerivation rec { pname = "pt2-clone"; - version = "1.29"; + version = "1.31"; src = fetchFromGitHub { owner = "8bitbubsy"; repo = "pt2-clone"; rev = "v${version}"; - sha256 = "sha256-xnw4UL30nUv/Ru6x/7d05gC0X9nREMdXO9QWBjVoIvo="; + sha256 = "sha256-hIm9HWKBTFmxU9jI41PfScZIHpZOZpjvV2jgaMX/KSg="; }; nativeBuildInputs = [ cmake ]; - buildInputs = [ SDL2 ] ++ lib.optional stdenv.isLinux alsaLib; + buildInputs = [ SDL2 ] ++ lib.optional stdenv.isLinux alsa-lib; passthru.tests = { pt2-clone-opens = nixosTests.pt2-clone; diff --git a/third_party/nixpkgs/pkgs/applications/audio/ptcollab/default.nix b/third_party/nixpkgs/pkgs/applications/audio/ptcollab/default.nix index f5752dd96f..c5b9f2b804 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/ptcollab/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/ptcollab/default.nix @@ -4,6 +4,7 @@ , fetchFromGitHub , nix-update-script , qmake +, pkg-config , qtbase , qtmultimedia , libvorbis @@ -12,21 +13,16 @@ mkDerivation rec { pname = "ptcollab"; - version = "0.4.0"; + version = "0.4.1"; src = fetchFromGitHub { owner = "yuxshao"; repo = "ptcollab"; rev = "v${version}"; - sha256 = "1yfnf47saxxj17x0vyxihr343kp7gz3fashzky79j80sqlm6ng85"; + sha256 = "sha256-98v9it9M5FXCsOpWvO10uKYmEH15v1FEH1hH73XHa7w="; }; - postPatch = '' - substituteInPlace src/editor.pro \ - --replace '/usr/include/rtmidi' '${rtmidi}/include/rtmidi' - ''; - - nativeBuildInputs = [ qmake ]; + nativeBuildInputs = [ qmake pkg-config ]; buildInputs = [ qtbase qtmultimedia libvorbis rtmidi ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/puredata/default.nix b/third_party/nixpkgs/pkgs/applications/audio/puredata/default.nix index 9bc6903e51..ebdc0388b9 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/puredata/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/puredata/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, autoreconfHook, gettext, makeWrapper -, alsaLib, libjack2, tk, fftw +, alsa-lib, libjack2, tk, fftw }: stdenv.mkDerivation rec { @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook gettext makeWrapper ]; - buildInputs = [ alsaLib libjack2 fftw ]; + buildInputs = [ alsa-lib libjack2 fftw ]; configureFlags = [ "--enable-alsa" diff --git a/third_party/nixpkgs/pkgs/applications/audio/qjackctl/default.nix b/third_party/nixpkgs/pkgs/applications/audio/qjackctl/default.nix index 586dfeae73..7196829afa 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/qjackctl/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/qjackctl/default.nix @@ -1,5 +1,5 @@ { lib, mkDerivation, fetchFromGitHub -, pkg-config, cmake, alsaLib, libjack2, dbus, qtbase, qttools, qtx11extras +, pkg-config, cmake, alsa-lib, libjack2, dbus, qtbase, qttools, qtx11extras # Enable jack session support , jackSession ? false }: @@ -21,7 +21,7 @@ mkDerivation rec { qtbase qtx11extras qttools - alsaLib + alsa-lib libjack2 dbus ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/qmidiarp/default.nix b/third_party/nixpkgs/pkgs/applications/audio/qmidiarp/default.nix index 4fa165a05a..618062dc2f 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/qmidiarp/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/qmidiarp/default.nix @@ -5,7 +5,7 @@ , lv2 , pkg-config , qt5 -, alsaLib +, alsa-lib , libjack2 }: @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib lv2 libjack2 ] ++ (with qt5; [ diff --git a/third_party/nixpkgs/pkgs/applications/audio/qmidinet/default.nix b/third_party/nixpkgs/pkgs/applications/audio/qmidinet/default.nix index ea5430a82a..51772cc135 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/qmidinet/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/qmidinet/default.nix @@ -1,4 +1,4 @@ -{ mkDerivation, lib, fetchurl, pkg-config, qtbase, qttools, alsaLib, libjack2 }: +{ mkDerivation, lib, fetchurl, pkg-config, qtbase, qttools, alsa-lib, libjack2 }: mkDerivation rec { version = "0.9.1"; @@ -11,7 +11,7 @@ mkDerivation rec { hardeningDisable = [ "format" ]; - buildInputs = [ qtbase qttools alsaLib libjack2 ]; + buildInputs = [ qtbase qttools alsa-lib libjack2 ]; nativeBuildInputs = [ pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/qmidiroute/default.nix b/third_party/nixpkgs/pkgs/applications/audio/qmidiroute/default.nix index e24824985f..35aea5bd08 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/qmidiroute/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/qmidiroute/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, pkg-config, qt4, alsaLib }: +{ lib, stdenv, fetchurl, pkg-config, qt4, alsa-lib }: stdenv.mkDerivation rec { version = "0.4.0"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ qt4 alsaLib ]; + buildInputs = [ qt4 alsa-lib ]; meta = with lib; { description = "MIDI event processor and router"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/qmmp/default.nix b/third_party/nixpkgs/pkgs/applications/audio/qmmp/default.nix index 2ff145d45c..25d7857c35 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/qmmp/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/qmmp/default.nix @@ -6,7 +6,7 @@ , libmad, taglib, libvorbis, libogg, flac, libmpcdec, libmodplug, libsndfile , libcdio, cdparanoia, libcddb, faad2, ffmpeg, wildmidi # output plugins -, alsaLib, libpulseaudio +, alsa-lib, libpulseaudio # effect plugins , libsamplerate }: @@ -46,7 +46,7 @@ mkDerivation rec { libmad taglib libvorbis libogg flac libmpcdec libmodplug libsndfile libcdio cdparanoia libcddb faad2 ffmpeg wildmidi # output plugins - alsaLib libpulseaudio + alsa-lib libpulseaudio # effect plugins libsamplerate ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/qsynth/default.nix b/third_party/nixpkgs/pkgs/applications/audio/qsynth/default.nix index 417c478e9e..6d75c32a66 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/qsynth/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/qsynth/default.nix @@ -1,4 +1,4 @@ -{ lib, fetchurl, alsaLib, fluidsynth, libjack2, autoconf, pkg-config +{ lib, fetchurl, alsa-lib, fluidsynth, libjack2, autoconf, pkg-config , mkDerivation, qtbase, qttools, qtx11extras }: @@ -13,7 +13,7 @@ mkDerivation rec { nativeBuildInputs = [ autoconf pkg-config ]; - buildInputs = [ alsaLib fluidsynth libjack2 qtbase qttools qtx11extras ]; + buildInputs = [ alsa-lib fluidsynth libjack2 qtbase qttools qtx11extras ]; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/applications/audio/qtractor/default.nix b/third_party/nixpkgs/pkgs/applications/audio/qtractor/default.nix index f19d0f70fd..b1d0928b86 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/qtractor/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/qtractor/default.nix @@ -1,4 +1,4 @@ -{ alsaLib +{ alsa-lib , aubio , cmake , dssi @@ -45,7 +45,7 @@ mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib aubio dssi flac diff --git a/third_party/nixpkgs/pkgs/applications/audio/rakarrack/default.nix b/third_party/nixpkgs/pkgs/applications/audio/rakarrack/default.nix index 8b5dd869e8..6d5d1ca860 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/rakarrack/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/rakarrack/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, alsaUtils, fltk, libjack2, libXft, +{ lib, stdenv, fetchurl, alsa-lib, alsa-utils, fltk, libjack2, libXft, libXpm, libjpeg, libpng, libsamplerate, libsndfile, zlib }: stdenv.mkDerivation rec { @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { patches = [ ./fltk-path.patch ]; - buildInputs = [ alsaLib alsaUtils fltk libjack2 libXft libXpm libjpeg + buildInputs = [ alsa-lib alsa-utils fltk libjack2 libXft libXpm libjpeg libpng libsamplerate libsndfile zlib ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/audio/reaper/default.nix b/third_party/nixpkgs/pkgs/applications/audio/reaper/default.nix index 48504a312c..773560c83c 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/reaper/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/reaper/default.nix @@ -3,7 +3,7 @@ , autoPatchelfHook , makeWrapper -, alsaLib +, alsa-lib , gtk3 , lame , ffmpeg @@ -17,11 +17,12 @@ stdenv.mkDerivation rec { pname = "reaper"; - version = "6.28"; + version = "6.29"; src = fetchurl { - url = "https://www.reaper.fm/files/${lib.versions.major version}.x/reaper${builtins.replaceStrings ["."] [""] version}_linux_x86_64.tar.xz"; - hash = "sha256-38HSjR+rQWPzMOjq1abLn/MP3DCz5YzBg0v2kBsQmR4="; + url = "https://www.reaper.fm/files/${lib.versions.major version}.x/reaper${builtins.replaceStrings ["."] [""] version}_linux_${stdenv.targetPlatform.qemuArch}.tar.xz"; + hash = if stdenv.isx86_64 then "sha256-DOul6J2Y7szy4+Q4SeO0uG6PSuU+MELE7ky8W3mSpTQ=" + else "sha256-67iTi6bFlbQtyCjnPIjK8K/3aV+zaCsWBRCWmgYonM4="; }; nativeBuildInputs = [ @@ -32,7 +33,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib stdenv.cc.cc.lib # reaper and libSwell need libstdc++.so.6 gtk3 ]; @@ -74,7 +75,7 @@ stdenv.mkDerivation rec { description = "Digital audio workstation"; homepage = "https://www.reaper.fm/"; license = licenses.unfree; - platforms = [ "x86_64-linux" ]; + platforms = [ "x86_64-linux" "aarch64-linux" ]; maintainers = with maintainers; [ jfrankenau ilian ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/audio/renoise/default.nix b/third_party/nixpkgs/pkgs/applications/audio/renoise/default.nix index e874b63898..acd1d80c86 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/renoise/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/renoise/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, libX11, libXext, libXcursor, libXrandr, libjack2, alsaLib +{ lib, stdenv, fetchurl, libX11, libXext, libXcursor, libXrandr, libjack2, alsa-lib , mpg123, releasePath ? null }: with lib; @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { releasePath else throw "Platform is not supported. Use instalation native to your platform https://www.renoise.com/"; - buildInputs = [ alsaLib libjack2 libX11 libXcursor libXext libXrandr ]; + buildInputs = [ alsa-lib libjack2 libX11 libXcursor libXext libXrandr ]; installPhase = '' cp -r Resources $out diff --git a/third_party/nixpkgs/pkgs/applications/audio/rosegarden/default.nix b/third_party/nixpkgs/pkgs/applications/audio/rosegarden/default.nix index b95e5fdc76..38d8a87696 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/rosegarden/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/rosegarden/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, cmake, makedepend, perl, pkg-config, qttools, wrapQtAppsHook -, dssi, fftwSinglePrec, ladspaH, ladspaPlugins, libjack2, alsaLib +, dssi, fftwSinglePrec, ladspaH, ladspaPlugins, libjack2, alsa-lib , liblo, libsamplerate, libsndfile, lirc ? null, lrdf, qtbase }: stdenv.mkDerivation (rec { @@ -30,7 +30,7 @@ stdenv.mkDerivation (rec { lirc lrdf qtbase - alsaLib + alsa-lib ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/audio/rymcast/default.nix b/third_party/nixpkgs/pkgs/applications/audio/rymcast/default.nix index 9f63dbe7bc..92d3151c83 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/rymcast/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/rymcast/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchzip, autoPatchelfHook, makeWrapper -, alsaLib, curl, gtk3, webkitgtk, zenity }: +, alsa-lib, curl, gtk3, webkitgtk, zenity }: stdenv.mkDerivation rec { pname = "rymcast"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoPatchelfHook makeWrapper ]; - buildInputs = [ alsaLib curl gtk3 stdenv.cc.cc.lib webkitgtk zenity ]; + buildInputs = [ alsa-lib curl gtk3 stdenv.cc.cc.lib webkitgtk zenity ]; installPhase = '' mkdir -p "$out/bin" diff --git a/third_party/nixpkgs/pkgs/applications/audio/samplv1/default.nix b/third_party/nixpkgs/pkgs/applications/audio/samplv1/default.nix index 8f0a480812..8c70705168 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/samplv1/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/samplv1/default.nix @@ -1,5 +1,5 @@ { mkDerivation, lib, fetchurl, pkg-config, libjack2 -, alsaLib, liblo, libsndfile, lv2, qtbase, qttools +, alsa-lib, liblo, libsndfile, lv2, qtbase, qttools , rubberband }: @@ -14,7 +14,7 @@ mkDerivation rec { nativeBuildInputs = [ qttools pkg-config ]; - buildInputs = [ libjack2 alsaLib liblo libsndfile lv2 qtbase rubberband ]; + buildInputs = [ libjack2 alsa-lib liblo libsndfile lv2 qtbase rubberband ]; meta = with lib; { description = "An old-school all-digital polyphonic sampler synthesizer with stereo fx"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/schismtracker/default.nix b/third_party/nixpkgs/pkgs/applications/audio/schismtracker/default.nix index 7e276e0722..ba193f7019 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/schismtracker/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/schismtracker/default.nix @@ -2,7 +2,7 @@ , stdenv , fetchFromGitHub , autoreconfHook -, alsaLib +, alsa-lib , python , SDL }: @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook python ]; - buildInputs = [ SDL ] ++ lib.optional stdenv.isLinux alsaLib; + buildInputs = [ SDL ] ++ lib.optional stdenv.isLinux alsa-lib; meta = with lib; { description = "Music tracker application, free reimplementation of Impulse Tracker"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/scream/default.nix b/third_party/nixpkgs/pkgs/applications/audio/scream/default.nix index 976ede5803..fb0ba9408d 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/scream/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/scream/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, config, fetchFromGitHub, cmake, pkg-config -, alsaSupport ? stdenv.isLinux, alsaLib +, alsaSupport ? stdenv.isLinux, alsa-lib , pulseSupport ? config.pulseaudio or stdenv.isLinux, libpulseaudio }: @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { }; buildInputs = lib.optional pulseSupport libpulseaudio - ++ lib.optional alsaSupport alsaLib; + ++ lib.optional alsaSupport alsa-lib; nativeBuildInputs = [ cmake pkg-config ]; cmakeFlags = [ diff --git a/third_party/nixpkgs/pkgs/applications/audio/seq24/default.nix b/third_party/nixpkgs/pkgs/applications/audio/seq24/default.nix index 84eebfac69..f586a1592f 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/seq24/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/seq24/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, gtkmm2, libjack2, pkg-config }: +{ lib, stdenv, fetchurl, alsa-lib, gtkmm2, libjack2, pkg-config }: stdenv.mkDerivation rec { pname = "seq24"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { patches = [ ./mutex_no_nameclash.patch ]; - buildInputs = [ alsaLib gtkmm2 libjack2 ]; + buildInputs = [ alsa-lib gtkmm2 libjack2 ]; nativeBuildInputs = [ pkg-config ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/audio/seq66/default.nix b/third_party/nixpkgs/pkgs/applications/audio/seq66/default.nix index 71d70c2dd5..0132b96790 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/seq66/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/seq66/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, autoreconfHook, pkg-config, qttools, which -, alsaLib, libjack2, liblo, qtbase +, alsa-lib, libjack2, liblo, qtbase }: stdenv.mkDerivation rec { @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook pkg-config qttools which ]; - buildInputs = [ alsaLib libjack2 liblo qtbase ]; + buildInputs = [ alsa-lib libjack2 liblo qtbase ]; postPatch = '' for d in libseq66/include libseq66/src libsessions/include libsessions/src seq_qt5/src seq_rtmidi/include seq_rtmidi/src Seqtool/src; do diff --git a/third_party/nixpkgs/pkgs/applications/audio/setbfree/default.nix b/third_party/nixpkgs/pkgs/applications/audio/setbfree/default.nix index 613abbf3c1..67851611f7 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/setbfree/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/setbfree/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchzip, alsaLib, freetype, ftgl, libjack2, libX11, lv2 +{ lib, stdenv, fetchzip, alsa-lib, freetype, ftgl, libjack2, libX11, lv2 , libGLU, libGL, pkg-config, ttf_bitstream_vera }: @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; buildInputs = [ - alsaLib freetype ftgl libjack2 libX11 lv2 libGLU libGL + alsa-lib freetype ftgl libjack2 libX11 lv2 libGLU libGL ttf_bitstream_vera ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/sidplayfp/default.nix b/third_party/nixpkgs/pkgs/applications/audio/sidplayfp/default.nix index 65f21c1361..b27593626e 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/sidplayfp/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/sidplayfp/default.nix @@ -1,12 +1,13 @@ { stdenv , lib , fetchFromGitHub +, nix-update-script , autoreconfHook , perl , pkg-config , libsidplayfp , alsaSupport ? stdenv.hostPlatform.isLinux -, alsaLib +, alsa-lib , pulseSupport ? stdenv.hostPlatform.isLinux , libpulseaudio , out123Support ? stdenv.hostPlatform.isDarwin @@ -15,19 +16,19 @@ stdenv.mkDerivation rec { pname = "sidplayfp"; - version = "2.1.1"; + version = "2.2.0"; src = fetchFromGitHub { owner = "libsidplayfp"; repo = "sidplayfp"; rev = "v${version}"; - sha256 = "0s3xmg3yzfqbsnlh2y46w7b5jim5zq7mshs6hx03q8wdr75cvwh4"; + sha256 = "sha256-hN7225lhuYyo4wPDiiEc9FaPg90pZ13mLw93V8tb/P0="; }; nativeBuildInputs = [ autoreconfHook perl pkg-config ]; buildInputs = [ libsidplayfp ] - ++ lib.optional alsaSupport alsaLib + ++ lib.optional alsaSupport alsa-lib ++ lib.optional pulseSupport libpulseaudio ++ lib.optional out123Support mpg123; @@ -37,6 +38,12 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; + passthru = { + updateScript = nix-update-script { + attrPath = pname; + }; + }; + meta = with lib; { description = "A SID player using libsidplayfp"; homepage = "https://github.com/libsidplayfp/sidplayfp"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/snapcast/default.nix b/third_party/nixpkgs/pkgs/applications/audio/snapcast/default.nix index 9351d1b0db..0299f66191 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/snapcast/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/snapcast/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchFromGitHub, cmake, pkg-config -, alsaLib, asio, avahi, boost17x, flac, libogg, libvorbis, soxr +, alsa-lib, asio, avahi, boost17x, flac, libogg, libvorbis, soxr , nixosTests }: let @@ -48,7 +48,7 @@ stdenv.mkDerivation rec { # not needed buildInputs = [ boost17x - alsaLib asio avahi flac libogg libvorbis + alsa-lib asio avahi flac libogg libvorbis aixlog popl soxr ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/snd/default.nix b/third_party/nixpkgs/pkgs/applications/audio/snd/default.nix index 164f266462..4881360b82 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/snd/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/snd/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, pkg-config -, alsaLib, fftw, gsl, motif, xorg +, alsa-lib, fftw, gsl, motif, xorg }: stdenv.mkDerivation rec { @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib fftw gsl motif ] + buildInputs = [ alsa-lib fftw gsl motif ] ++ (with xorg; [ libXext libXft libXpm libXt ]); configureFlags = [ "--with-motif" ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/sndpeek/default.nix b/third_party/nixpkgs/pkgs/applications/audio/sndpeek/default.nix index a8dfe759d6..39f706d1f2 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/sndpeek/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/sndpeek/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, libsndfile, freeglut, alsaLib, mesa, libGLU, libX11, libXmu +{ lib, stdenv, fetchurl, libsndfile, freeglut, alsa-lib, mesa, libGLU, libX11, libXmu , libXext, libXi }: stdenv.mkDerivation rec { @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { buildInputs = [ freeglut - alsaLib + alsa-lib mesa libGLU libsndfile diff --git a/third_party/nixpkgs/pkgs/applications/audio/songrec/default.nix b/third_party/nixpkgs/pkgs/applications/audio/songrec/default.nix index 81bd3c67d7..ccedb4c069 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/songrec/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/songrec/default.nix @@ -3,7 +3,7 @@ , fetchFromGitHub , gtk3 , openssl -, alsaLib +, alsa-lib , pkg-config , ffmpeg }: @@ -23,7 +23,11 @@ rustPlatform.buildRustPackage rec { nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib gtk3 openssl ffmpeg ]; + buildInputs = [ alsa-lib gtk3 openssl ffmpeg ]; + + postInstall = '' + mv packaging/rootfs/usr/share $out/share + ''; meta = with lib; { description = "An open-source Shazam client for Linux, written in Rust"; diff --git a/third_party/nixpkgs/pkgs/applications/audio/sonic-lineup/default.nix b/third_party/nixpkgs/pkgs/applications/audio/sonic-lineup/default.nix index b88165f693..711444651c 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/sonic-lineup/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/sonic-lineup/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, boost, bzip2, fftw, fftwFloat, libfishsound +{ lib, stdenv, fetchurl, alsa-lib, boost, bzip2, fftw, fftwFloat, libfishsound , libid3tag, liblo, libmad, liboggz, libpulseaudio, libsamplerate , libsndfile, lrdf, opusfile, portaudio, rubberband, serd, sord, capnproto , wrapQtAppsHook, pkg-config @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { }; buildInputs = - [ alsaLib boost bzip2 fftw fftwFloat libfishsound libid3tag liblo + [ alsa-lib boost bzip2 fftw fftwFloat libfishsound libid3tag liblo libmad liboggz libpulseaudio libsamplerate libsndfile lrdf opusfile portaudio rubberband serd sord capnproto ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/sonic-visualiser/default.nix b/third_party/nixpkgs/pkgs/applications/audio/sonic-visualiser/default.nix index f2df119fcc..43254e6c2b 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/sonic-visualiser/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/sonic-visualiser/default.nix @@ -1,6 +1,6 @@ # TODO add plugins having various licenses, see http://www.vamp-plugins.org/download.html -{ lib, stdenv, fetchurl, alsaLib, bzip2, fftw, libjack2, libX11, liblo +{ lib, stdenv, fetchurl, alsa-lib, bzip2, fftw, libjack2, libX11, liblo , libmad, lrdf, librdf_raptor, librdf_rasqal, libsamplerate , libsndfile, pkg-config, libpulseaudio, qtbase, qtsvg, redland , rubberband, serd, sord, vamp-plugin-sdk, fftwFloat @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config wrapQtAppsHook ]; buildInputs = [ libsndfile qtbase qtsvg fftw fftwFloat bzip2 lrdf rubberband - libsamplerate vamp-plugin-sdk alsaLib librdf_raptor librdf_rasqal redland + libsamplerate vamp-plugin-sdk alsa-lib librdf_raptor librdf_rasqal redland serd sord # optional diff --git a/third_party/nixpkgs/pkgs/applications/audio/sooperlooper/default.nix b/third_party/nixpkgs/pkgs/applications/audio/sooperlooper/default.nix index 135c042d53..1cad71ae29 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/sooperlooper/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/sooperlooper/default.nix @@ -14,7 +14,7 @@ , rubberband , gettext , ncurses -, alsaLib +, alsa-lib , fftw }: @@ -47,7 +47,7 @@ stdenv.mkDerivation rec { rubberband gettext ncurses - alsaLib + alsa-lib fftw ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/soundtracker/default.nix b/third_party/nixpkgs/pkgs/applications/audio/soundtracker/default.nix index 71fc763a5c..3dc9089b24 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/soundtracker/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/soundtracker/default.nix @@ -3,7 +3,7 @@ , pkg-config , autoconf , gtk2 -, alsaLib +, alsa-lib , SDL , jack2 , audiofile @@ -33,7 +33,7 @@ stdenv.mkDerivation rec { jack2 audiofile goocanvas - ] ++ lib.optional stdenv.isLinux alsaLib; + ] ++ lib.optional stdenv.isLinux alsa-lib; hardeningDisable = [ "format" ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/spot/default.nix b/third_party/nixpkgs/pkgs/applications/audio/spot/default.nix index afe669f386..2859a2e942 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/spot/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/spot/default.nix @@ -13,7 +13,7 @@ , libhandy , gtk3 , openssl -, alsaLib +, alsa-lib , libpulseaudio , wrapGAppsHook }: @@ -55,7 +55,7 @@ stdenv.mkDerivation rec { gtk3 libhandy openssl - alsaLib + alsa-lib libpulseaudio ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/spotify-tui/default.nix b/third_party/nixpkgs/pkgs/applications/audio/spotify-tui/default.nix index 86873802bf..783c15674a 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/spotify-tui/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/spotify-tui/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "spotify-tui"; - version = "0.23.0"; + version = "0.24.0"; src = fetchFromGitHub { owner = "Rigellute"; repo = "spotify-tui"; rev = "v${version}"; - sha256 = "082y5m2vglzx9kdc2088zynz0njcnljnb0y170igmlsxq9wkrgg2"; + sha256 = "1vi6b22ygi6nwydjwqirph9k18akbw81m3bci134nrbnrb30glla"; }; - cargoSha256 = "1khn6fx13qlfpqwnw7ysgan5h4nrg2qnzn2p74vn7jic3mqc3sax"; + cargoSha256 = "1l91xcgr3hcjaphns1hs0i8w1ynxqwx7rbgpl0i5xnyrkw0gn9lj"; nativeBuildInputs = [ installShellFiles ] ++ lib.optionals stdenv.isLinux [ pkg-config python3 ]; buildInputs = [ ] diff --git a/third_party/nixpkgs/pkgs/applications/audio/spotify/default.nix b/third_party/nixpkgs/pkgs/applications/audio/spotify/default.nix index 8656deb2f6..db0f69c80a 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/spotify/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/spotify/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, lib, stdenv, squashfsTools, xorg, alsaLib, makeWrapper, openssl, freetype +{ fetchurl, lib, stdenv, squashfsTools, xorg, alsa-lib, makeWrapper, openssl, freetype , glib, pango, cairo, atk, gdk-pixbuf, gtk3, cups, nspr, nss, libpng, libnotify , libgcrypt, systemd, fontconfig, dbus, expat, ffmpeg, curl, zlib, gnome , at-spi2-atk, at-spi2-core, libpulseaudio, libdrm, mesa, libxkbcommon @@ -20,7 +20,7 @@ let rev = "46"; deps = [ - alsaLib + alsa-lib atk at-spi2-atk at-spi2-core diff --git a/third_party/nixpkgs/pkgs/applications/audio/spotifyd/default.nix b/third_party/nixpkgs/pkgs/applications/audio/spotifyd/default.nix index 8a077918d4..e9de6cb3cf 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/spotifyd/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/spotifyd/default.nix @@ -1,5 +1,5 @@ { lib, fetchFromGitHub, rustPackages, pkg-config, openssl -, withALSA ? true, alsaLib +, withALSA ? true, alsa-lib , withPulseAudio ? false, libpulseaudio , withPortAudio ? false, portaudio , withMpris ? false @@ -29,7 +29,7 @@ rustPackages.rustPlatform.buildRustPackage rec { nativeBuildInputs = [ pkg-config ]; buildInputs = [ openssl ] - ++ lib.optional withALSA alsaLib + ++ lib.optional withALSA alsa-lib ++ lib.optional withPulseAudio libpulseaudio ++ lib.optional withPortAudio portaudio ++ lib.optional (withMpris || withKeyring) dbus; diff --git a/third_party/nixpkgs/pkgs/applications/audio/squeezelite/default.nix b/third_party/nixpkgs/pkgs/applications/audio/squeezelite/default.nix index 600ba95947..31fe69b00d 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/squeezelite/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/squeezelite/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub -, alsaLib, flac, libmad, libvorbis, mpg123 +, alsa-lib, flac, libmad, libvorbis, mpg123 , dsdSupport ? true , faad2Support ? true, faad2 , ffmpegSupport ? true, ffmpeg @@ -33,7 +33,7 @@ in stdenv.mkDerivation { sha256 = "024ypr1da2r079k3hgiifzd3d3wcfprhbl5zdm40zm0c7frzmr8i"; }; - buildInputs = [ alsaLib flac libmad libvorbis mpg123 ] + buildInputs = [ alsa-lib flac libmad libvorbis mpg123 ] ++ optional faad2Support faad2 ++ optional ffmpegSupport ffmpeg ++ optional opusSupport opusfile diff --git a/third_party/nixpkgs/pkgs/applications/audio/stochas/default.nix b/third_party/nixpkgs/pkgs/applications/audio/stochas/default.nix index aa4b4acf51..d295689716 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/stochas/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/stochas/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, cmake, pkg-config, libX11, libXrandr, libXinerama, libXext, libXcursor, freetype, alsaLib, libjack2 }: +{ lib, stdenv, fetchFromGitHub, cmake, pkg-config, libX11, libXrandr, libXinerama, libXext, libXcursor, freetype, alsa-lib, libjack2 }: stdenv.mkDerivation rec { pname = "stochas"; @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; buildInputs = [ - libX11 libXrandr libXinerama libXext libXcursor freetype alsaLib libjack2 + libX11 libXrandr libXinerama libXext libXcursor freetype alsa-lib libjack2 ]; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/audio/strawberry/default.nix b/third_party/nixpkgs/pkgs/applications/audio/strawberry/default.nix index c8ffba2c2a..5a5671ec77 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/strawberry/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/strawberry/default.nix @@ -4,7 +4,7 @@ , fetchFromGitHub , cmake , pkg-config -, alsaLib +, alsa-lib , boost , chromaprint , fftw @@ -45,7 +45,7 @@ mkDerivation rec { }; buildInputs = [ - alsaLib + alsa-lib boost chromaprint fftw diff --git a/third_party/nixpkgs/pkgs/applications/audio/sunvox/default.nix b/third_party/nixpkgs/pkgs/applications/audio/sunvox/default.nix index 577175fcff..7c5c378d2f 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/sunvox/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/sunvox/default.nix @@ -1,7 +1,7 @@ -{ lib, stdenv, fetchurl, unzip, alsaLib, libX11, libXi, SDL2 }: +{ lib, stdenv, fetchurl, unzip, alsa-lib, libX11, libXi, SDL2 }: let - libPath = lib.makeLibraryPath [ stdenv.cc.cc alsaLib libX11 libXi SDL2 ]; + libPath = lib.makeLibraryPath [ stdenv.cc.cc alsa-lib libX11 libXi SDL2 ]; arch = if stdenv.isAarch64 then "arm64" diff --git a/third_party/nixpkgs/pkgs/applications/audio/synthv1/default.nix b/third_party/nixpkgs/pkgs/applications/audio/synthv1/default.nix index 50e16c355e..eecf8caee3 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/synthv1/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/synthv1/default.nix @@ -1,4 +1,4 @@ -{ mkDerivation, lib, fetchurl, pkg-config, qtbase, qttools, libjack2, alsaLib, liblo, lv2 }: +{ mkDerivation, lib, fetchurl, pkg-config, qtbase, qttools, libjack2, alsa-lib, liblo, lv2 }: mkDerivation rec { pname = "synthv1"; @@ -9,7 +9,7 @@ mkDerivation rec { sha256 = "047y2l7ipzv00ly54f074v6p043xjml7vz0svc7z81bhx74vs0ix"; }; - buildInputs = [ qtbase qttools libjack2 alsaLib liblo lv2 ]; + buildInputs = [ qtbase qttools libjack2 alsa-lib liblo lv2 ]; nativeBuildInputs = [ pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/tonelib-gfx/default.nix b/third_party/nixpkgs/pkgs/applications/audio/tonelib-gfx/default.nix new file mode 100644 index 0000000000..137014508a --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/audio/tonelib-gfx/default.nix @@ -0,0 +1,60 @@ +{ stdenv +, dpkg +, lib +, autoPatchelfHook +, fetchurl +, gtk3 +, glib +, desktop-file-utils +, alsa-lib +, libjack2 +, harfbuzz +, fribidi +, pango +, freetype +}: + +stdenv.mkDerivation rec { + pname = "tonelib-gfx"; + version = "4.6.6"; + + src = fetchurl { + url = "https://www.tonelib.net/download/0509/ToneLib-GFX-amd64.deb"; + sha256 = "sha256-wdX3SQSr0IZHsTUl+1Y0iETme3gTyryexhZ/9XHkGeo="; + }; + + buildInputs = [ + dpkg + gtk3 + glib + desktop-file-utils + alsa-lib + libjack2 + harfbuzz + fribidi + pango + freetype + ]; + + nativeBuildInputs = [ + autoPatchelfHook + ]; + + unpackPhase = '' + mkdir -p $TMP/ $out/ + dpkg -x $src $TMP + ''; + + installPhase = '' + cp -R $TMP/usr/* $out/ + mv $out/bin/ToneLib-GFX $out/bin/tonelib-gfx + ''; + + meta = with lib; { + description = "Tonelib GFX is an amp and effects modeling software for electric guitar and bass."; + homepage = "https://tonelib.net/"; + license = licenses.unfree; + maintainers = with maintainers; [ dan4ik605743 ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/audio/tony/default.nix b/third_party/nixpkgs/pkgs/applications/audio/tony/default.nix index d8265c3161..aa18a5e397 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/tony/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/tony/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, pkg-config, wrapQtAppsHook -, alsaLib, boost, bzip2, fftw, fftwFloat, libX11, libfishsound, libid3tag +, alsa-lib, boost, bzip2, fftw, fftwFloat, libX11, libfishsound, libid3tag , libjack2, liblo, libmad, libogg, liboggz, libpulseaudio, libsamplerate , libsndfile, lrdf, opusfile, qtbase, qtsvg, rubberband, serd, sord }: @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config wrapQtAppsHook ]; buildInputs = [ - alsaLib boost bzip2 fftw fftwFloat libX11 libfishsound libid3tag + alsa-lib boost bzip2 fftw fftwFloat libX11 libfishsound libid3tag libjack2 liblo libmad libogg liboggz libpulseaudio libsamplerate libsndfile lrdf opusfile qtbase qtsvg rubberband serd sord ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/transcribe/default.nix b/third_party/nixpkgs/pkgs/applications/audio/transcribe/default.nix index 26cfb81898..9061c38f19 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/transcribe/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/transcribe/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchzip, lib, wrapGAppsHook, alsaLib, atk, cairo, gdk-pixbuf +{ stdenv, fetchzip, lib, wrapGAppsHook, alsa-lib, atk, cairo, gdk-pixbuf , glib, gst_all_1, gtk3, libSM, libX11, libpng12, pango, zlib }: stdenv.mkDerivation rec { @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { dontPatchELF = true; libPath = with gst_all_1; lib.makeLibraryPath [ - stdenv.cc.cc glib gtk3 atk pango cairo gdk-pixbuf alsaLib + stdenv.cc.cc glib gtk3 atk pango cairo gdk-pixbuf alsa-lib libX11 libSM libpng12 gstreamer gst-plugins-base zlib ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/traverso/default.nix b/third_party/nixpkgs/pkgs/applications/audio/traverso/default.nix index 71a91dc310..698a03b4a7 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/traverso/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/traverso/default.nix @@ -1,5 +1,5 @@ { mkDerivation, lib, fetchurl, cmake, pkg-config -, alsaLib, fftw, flac, lame, libjack2, libmad, libpulseaudio +, alsa-lib, fftw, flac, lame, libjack2, libmad, libpulseaudio , libsamplerate, libsndfile, libvorbis, portaudio, qtbase, wavpack }: mkDerivation { @@ -12,7 +12,7 @@ mkDerivation { }; nativeBuildInputs = [ cmake pkg-config ]; - buildInputs = [ alsaLib fftw flac.dev libjack2 lame + buildInputs = [ alsa-lib fftw flac.dev libjack2 lame libmad libpulseaudio libsamplerate.dev libsndfile.dev libvorbis portaudio qtbase wavpack ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/tunefish/default.nix b/third_party/nixpkgs/pkgs/applications/audio/tunefish/default.nix index 6dc1eb3396..df7564abcf 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/tunefish/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/tunefish/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, pkg-config, python3 -, alsaLib, curl, freetype, gtk3, libGL, libX11, libXext, libXinerama, webkitgtk +, alsa-lib, curl, freetype, gtk3, libGL, libX11, libXext, libXinerama, webkitgtk }: stdenv.mkDerivation { @@ -15,7 +15,7 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ pkg-config python3 ]; - buildInputs = [ alsaLib curl freetype gtk3 libGL libX11 libXext libXinerama webkitgtk ]; + buildInputs = [ alsa-lib curl freetype gtk3 libGL libX11 libXext libXinerama webkitgtk ]; postPatch = '' patchShebangs src/tunefish4/generate-lv2-ttl.py diff --git a/third_party/nixpkgs/pkgs/applications/audio/uade123/default.nix b/third_party/nixpkgs/pkgs/applications/audio/uade123/default.nix index 271f9f912e..8191fd381a 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/uade123/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/uade123/default.nix @@ -1,25 +1,74 @@ -{ lib, stdenv, fetchurl, which, libao, pkg-config }: +{ lib +, stdenv +, fetchFromGitLab +, pkg-config +, which +, makeWrapper +, libao +, libbencodetools +, sox +, lame +, flac +, vorbis-tools +}: -let - version = "2.13"; -in stdenv.mkDerivation { +stdenv.mkDerivation { pname = "uade123"; - inherit version; - src = fetchurl { - url = "http://zakalwe.fi/uade/uade2/uade-${version}.tar.bz2"; - sha256 = "04nn5li7xy4g5ysyjjngmv5d3ibxppkbb86m10vrvadzxdd4w69v"; + version = "unstable-2021-05-21"; + + src = fetchFromGitLab { + owner = "uade-music-player"; + repo = "uade"; + rev = "7169a46e777d19957cd7ff8ac31843203e725ddc"; + sha256 = "1dm7c924fy79y3wkb0qi71m1k6yw1x6j3whw7d0w4ka9hv6za03b"; }; - nativeBuildInputs = [ pkg-config which ]; - buildInputs = [ libao ]; + + postPatch = '' + patchShebangs . + substituteInPlace src/frontends/mod2ogg/mod2ogg2.sh.in \ + --replace '-e stat' '-n stat' \ + --replace '/usr/local' "$out" + ''; + + nativeBuildInputs = [ + pkg-config + which + makeWrapper + ]; + + buildInputs = [ + libao + libbencodetools + sox + lame + flac + vorbis-tools + ]; + + configureFlags = [ + "--bencode-tools-prefix=${libbencodetools}" + ]; enableParallelBuilding = true; + hardeningDisable = [ "format" ]; + postInstall = '' + wrapProgram $out/bin/mod2ogg2.sh \ + --prefix PATH : $out/bin:${lib.makeBinPath [ sox lame flac vorbis-tools ]} + # This is an old script, don't break expectations by renaming it + ln -s $out/bin/mod2ogg2{.sh,} + ''; + meta = with lib; { description = "Plays old Amiga tunes through UAE emulation and cloned m68k-assembler Eagleplayer API"; - homepage = "http://zakalwe.fi/uade/"; - license = licenses.gpl2; - maintainers = [ ]; + homepage = "https://zakalwe.fi/uade/"; + # It's a mix of licenses. "GPL", Public Domain, "LGPL", GPL2+, BSD, LGPL21+ and source code with unknown licenses. E.g. + # - hippel-coso player is "[not] under any Open Source certified license" + # - infogrames player is disassembled from Andi Silvas player, unknown license + # Let's make it easy and flag the whole package as unfree. + license = licenses.unfree; + maintainers = with maintainers; [ OPNA2608 ]; platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/applications/audio/vcv-rack/default.nix b/third_party/nixpkgs/pkgs/applications/audio/vcv-rack/default.nix index c7e24b926c..789b97507a 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/vcv-rack/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/vcv-rack/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, makeWrapper, fetchzip, fetchFromGitHub, pkg-config -, alsaLib, curl, glew, glfw, gtk2-x11, jansson, libjack2, libXext, libXi +, alsa-lib, curl, glew, glfw, gtk2-x11, jansson, libjack2, libXext, libXi , libzip, rtaudio, rtmidi, speex, libsamplerate }: let @@ -75,7 +75,7 @@ with lib; stdenv.mkDerivation rec { enableParallelBuilding = true; nativeBuildInputs = [ makeWrapper pkg-config ]; - buildInputs = [ alsaLib curl glew glfw gtk2-x11 jansson libjack2 libsamplerate libzip rtaudio rtmidi speex ]; + buildInputs = [ alsa-lib curl glew glfw gtk2-x11 jansson libjack2 libsamplerate libzip rtaudio rtmidi speex ]; buildFlags = [ "Rack" ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/vgmstream/default.nix b/third_party/nixpkgs/pkgs/applications/audio/vgmstream/default.nix new file mode 100644 index 0000000000..a3518f2398 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/audio/vgmstream/default.nix @@ -0,0 +1,33 @@ +{ stdenv, lib, fetchFromGitHub, cmake, pkg-config +, mpg123, ffmpeg, libvorbis, libao, jansson +}: +stdenv.mkDerivation rec { + pname = "vgmstream"; + version = "r1050-3448-g77cc431b"; + + src = fetchFromGitHub { + owner = "vgmstream"; + repo = "vgmstream"; + rev = version; + sha256 = "030q02c9li14by7vm00gn6v3m4dxxmfwiy9iyz3xsgzq1i7pqc1d"; + }; + + nativeBuildInputs = [ cmake pkg-config ]; + + buildInputs = [ mpg123 ffmpeg libvorbis libao jansson ]; + + # There's no nice way to build the audacious plugin without a circular dependency + cmakeFlags = [ "-DBUILD_AUDACIOUS=OFF" ]; + + preConfigure = '' + echo "#define VERSION \"${version}\"" > cli/version.h + ''; + + meta = with lib; { + description = "A library for playback of various streamed audio formats used in video games"; + homepage = "https://vgmstream.org"; + maintainers = with maintainers; [ zane ]; + license = with licenses; isc; + platforms = with platforms; unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/audio/virtual-ans/default.nix b/third_party/nixpkgs/pkgs/applications/audio/virtual-ans/default.nix index 1cb9c0f18b..c1e41e4128 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/virtual-ans/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/virtual-ans/default.nix @@ -3,7 +3,7 @@ , libX11 , libXi , libGL -, alsaLib +, alsa-lib , SDL2 , autoPatchelfHook }: @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { libX11 libXi libGL - alsaLib + alsa-lib SDL2 ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/vkeybd/default.nix b/third_party/nixpkgs/pkgs/applications/audio/vkeybd/default.nix index 943bd0d803..ec63915621 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/vkeybd/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/vkeybd/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, libX11, makeWrapper, tcl, tk }: +{ lib, stdenv, fetchurl, alsa-lib, libX11, makeWrapper, tcl, tk }: stdenv.mkDerivation rec { pname = "vkeybd"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ makeWrapper ]; - buildInputs = [ alsaLib libX11 tcl tk ]; + buildInputs = [ alsa-lib libX11 tcl tk ]; configurePhase = '' mkdir -p $out/bin diff --git a/third_party/nixpkgs/pkgs/applications/audio/whipper/default.nix b/third_party/nixpkgs/pkgs/applications/audio/whipper/default.nix index e96a6bfef2..d66c161664 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/whipper/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/whipper/default.nix @@ -1,6 +1,7 @@ { lib , python3 , fetchFromGitHub +, fetchpatch , libcdio-paranoia , cdrdao , libsndfile @@ -22,6 +23,15 @@ in python3.pkgs.buildPythonApplication rec { sha256 = "00cq03cy5dyghmibsdsq5sdqv3bzkzhshsng74bpnb5lasxp3ia5"; }; + patches = [ + (fetchpatch { + # Use custom YAML subclass to be compatible with ruamel_yaml>=0.17 + # https://github.com/whipper-team/whipper/pull/543 + url = "https://github.com/whipper-team/whipper/commit/3ce5964dfe8be1e625c3e3b091360dd0bc34a384.patch"; + sha256 = "0n9dmib884y8syvypsg88j0h71iy42n1qsrh0am8pwna63sl15ah"; + }) + ]; + nativeBuildInputs = with python3.pkgs; [ setuptools-scm docutils diff --git a/third_party/nixpkgs/pkgs/applications/audio/xmp/default.nix b/third_party/nixpkgs/pkgs/applications/audio/xmp/default.nix index b6accf1993..6158f33713 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/xmp/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/xmp/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, pkg-config, alsaLib, libxmp }: +{ lib, stdenv, fetchurl, pkg-config, alsa-lib, libxmp }: stdenv.mkDerivation rec { name = "xmp-4.1.0"; @@ -16,5 +16,5 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib libxmp ]; + buildInputs = [ alsa-lib libxmp ]; } diff --git a/third_party/nixpkgs/pkgs/applications/audio/xsynth-dssi/default.nix b/third_party/nixpkgs/pkgs/applications/audio/xsynth-dssi/default.nix index b994f197e6..0802a79df0 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/xsynth-dssi/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/xsynth-dssi/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, autoconf, automake, dssi, gtk2, libjack2, +{ lib, stdenv, fetchurl, alsa-lib, autoconf, automake, dssi, gtk2, libjack2, ladspaH, ladspaPlugins, liblo, pkg-config }: stdenv.mkDerivation rec { @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { sha256 = "00nwv2pqjbmxqdc6xdm0cljq6z05lv4y6bibmhz1kih9lm0lklnk"; }; - buildInputs = [ alsaLib autoconf automake dssi gtk2 libjack2 ladspaH + buildInputs = [ alsa-lib autoconf automake dssi gtk2 libjack2 ladspaH ladspaPlugins liblo pkg-config ]; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/audio/yoshimi/default.nix b/third_party/nixpkgs/pkgs/applications/audio/yoshimi/default.nix index e9e191112f..dfb6a419c3 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/yoshimi/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/yoshimi/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub , alsaLib, boost, cairo, cmake, fftwSinglePrec, fltk, pcre +{ lib, stdenv, fetchFromGitHub , alsa-lib, boost, cairo, cmake, fftwSinglePrec, fltk, pcre , libjack2, libsndfile, libXdmcp, readline, lv2, libGLU, libGL, minixml, pkg-config, zlib, xorg }: @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { sha256 = "0bgcc5fbgwpdjircq00wlii30pakf45yzligpbnf02a554hh4j01"; }; buildInputs = [ - alsaLib boost cairo fftwSinglePrec fltk libjack2 libsndfile libXdmcp readline lv2 libGLU libGL + alsa-lib boost cairo fftwSinglePrec fltk libjack2 libsndfile libXdmcp readline lv2 libGLU libGL minixml zlib xorg.libpthreadstubs pcre ]; diff --git a/third_party/nixpkgs/pkgs/applications/audio/zita-ajbridge/default.nix b/third_party/nixpkgs/pkgs/applications/audio/zita-ajbridge/default.nix index 4b09486460..db6fc7d338 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/zita-ajbridge/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/zita-ajbridge/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, libjack2, zita-alsa-pcmi, zita-resampler }: +{ lib, stdenv, fetchurl, alsa-lib, libjack2, zita-alsa-pcmi, zita-resampler }: stdenv.mkDerivation rec { name = "zita-ajbridge-0.8.4"; @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { sha256 = "0g5v0l0zmqh049mhv62n8s5bpm0yrlby7mkxxhs5qwadp8v4w9mw"; }; - buildInputs = [ alsaLib libjack2 zita-alsa-pcmi zita-resampler ]; + buildInputs = [ alsa-lib libjack2 zita-alsa-pcmi zita-resampler ]; preConfigure = '' cd ./source/ diff --git a/third_party/nixpkgs/pkgs/applications/audio/zynaddsubfx/default.nix b/third_party/nixpkgs/pkgs/applications/audio/zynaddsubfx/default.nix index dfc3e600ec..986e3215b9 100644 --- a/third_party/nixpkgs/pkgs/applications/audio/zynaddsubfx/default.nix +++ b/third_party/nixpkgs/pkgs/applications/audio/zynaddsubfx/default.nix @@ -16,7 +16,7 @@ # Optional dependencies , alsaSupport ? true -, alsaLib +, alsa-lib , dssiSupport ? false , dssi , ladspaH @@ -70,7 +70,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ cmake makeWrapper pkg-config ]; buildInputs = [ fftw liblo minixml zlib ] - ++ lib.optionals alsaSupport [ alsaLib ] + ++ lib.optionals alsaSupport [ alsa-lib ] ++ lib.optionals dssiSupport [ dssi ladspaH ] ++ lib.optionals jackSupport [ libjack2 ] ++ lib.optionals lashSupport [ lash ] diff --git a/third_party/nixpkgs/pkgs/applications/backup/vorta/default.nix b/third_party/nixpkgs/pkgs/applications/backup/vorta/default.nix index fc56d6c540..dc02e65bb7 100644 --- a/third_party/nixpkgs/pkgs/applications/backup/vorta/default.nix +++ b/third_party/nixpkgs/pkgs/applications/backup/vorta/default.nix @@ -1,34 +1,50 @@ { lib -, python3 +, python3Packages , fetchFromGitHub , wrapQtAppsHook , borgbackup +, qt5 }: -python3.pkgs.buildPythonApplication rec { +python3Packages.buildPythonApplication rec { pname = "vorta"; - version = "0.7.5"; + version = "0.7.7"; src = fetchFromGitHub { owner = "borgbase"; repo = "vorta"; rev = "v${version}"; - sha256 = "sha256-qPO8qmXYDDFwV+8hAUyfF4Ins0vkwEJbw4JPguUSYOw="; + sha256 = "sha256-AH9CvoWAaNLPLC+NL+VXtYq9CNCMt0AFtC1ZGXSlcHQ="; }; - postPatch = '' - sed -i -e '/setuptools_git/d' -e '/pytest-runner/d' setup.cfg - ''; - nativeBuildInputs = [ wrapQtAppsHook ]; - propagatedBuildInputs = with python3.pkgs; [ - paramiko peewee pyqt5 python-dateutil APScheduler psutil qdarkstyle - secretstorage appdirs setuptools + propagatedBuildInputs = with python3Packages; [ + paramiko + peewee + pyqt5 + python-dateutil + APScheduler + psutil + qdarkstyle + secretstorage + appdirs + setuptools ]; - # QT setup in tests broken. - doCheck = false; + postPatch = '' + substituteInPlace setup.cfg \ + --replace setuptools_git "" \ + --replace pytest-runner "" + + substituteInPlace src/vorta/assets/metadata/com.borgbase.Vorta.desktop \ + --replace Exec=vorta "Exec=$out/bin/vorta" \ + --replace com.borgbase.Vorta "com.borgbase.Vorta-symbolic" + ''; + + postInstall = '' + install -Dm644 src/vorta/assets/metadata/com.borgbase.Vorta.desktop $out/share/applications/com.borgbase.Vorta.desktop + ''; preFixup = '' makeWrapperArgs+=( @@ -37,6 +53,37 @@ python3.pkgs.buildPythonApplication rec { ) ''; + checkInputs = with python3Packages; [ + pytest-qt + pytest-mock + pytestCheckHook + ]; + + preCheck = '' + export HOME=$(mktemp -d) + # For tests/test_misc.py::test_autostart + mkdir -p $HOME/.config/autostart + export QT_PLUGIN_PATH="${qt5.qtbase.bin}/${qt5.qtbase.qtPluginPrefix}" + export QT_QPA_PLATFORM=offscreen + ''; + + disabledTestPaths = [ + "tests/test_archives.py" + "tests/test_borg.py" + "tests/test_lock.py" + "tests/test_notifications.py" + ]; + + disabledTests = [ + "diff_archives_dict_issue-Users" + "diff_archives-test" + "test_repo_unlink" + "test_repo_add_success" + "test_ssh_dialog" + "test_create" + "test_scheduler_create_backup" + ]; + meta = with lib; { license = licenses.gpl3Only; homepage = "https://vorta.borgbase.com/"; diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/charge-lnd/default.nix b/third_party/nixpkgs/pkgs/applications/blockchains/charge-lnd/default.nix index 3707b0741b..a3341a25b1 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/charge-lnd/default.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/charge-lnd/default.nix @@ -2,13 +2,13 @@ python3Packages.buildPythonApplication rec { pname = "charge-lnd"; - version = "0.1.2"; + version = "0.1.3"; src = fetchFromGitHub { owner = "accumulator"; repo = pname; rev = "v${version}"; - sha256 = "1m1ic69aj2vlnjlp4ckan8n67r01nfysvq4w6nny32wjkr0zvphr"; + sha256 = "0npn45qbbsbzj5qy9kwx662hml1y610ysmfl89sda02l6wf1sp3y"; }; propagatedBuildInputs = with python3Packages; [ diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/chia/default.nix b/third_party/nixpkgs/pkgs/applications/blockchains/chia/default.nix index 09fe6d1b2d..7b85a242ef 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/chia/default.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/chia/default.nix @@ -1,19 +1,29 @@ -{ lib, fetchFromGitHub, python3Packages }: +{ lib +, fetchFromGitHub +, fetchpatch +, python3Packages +}: python3Packages.buildPythonApplication rec { pname = "chia"; - version = "1.1.5"; + version = "1.1.7"; src = fetchFromGitHub { owner = "Chia-Network"; repo = "chia-blockchain"; rev = version; - sha256 = "ZUxWOlJGQpeQCtWt0PSdcbMackHdeuNFkxHvYDPcU8Y="; + sha256 = "05hcckkv3vhz172w9kp5lh4srakizx1l383dijs50vgx2bj30m8v"; }; patches = [ # tweak version requirements to what's available in Nixpkgs ./dependencies.patch + # Allow later websockets release, https://github.com/Chia-Network/chia-blockchain/pull/6304 + (fetchpatch { + name = "later-websockets.patch"; + url = "https://github.com/Chia-Network/chia-blockchain/commit/a188f161bf15a30e8e2efc5eec824e53e2a98a5b.patch"; + sha256 = "1s5qjhd4kmi28z6ni7pc5n09czxvh8qnbwmnqsmms7cpw700g78s"; + }) ]; nativeBuildInputs = [ @@ -38,6 +48,7 @@ python3Packages.buildPythonApplication rec { colorlog concurrent-log-handler cryptography + dnspython keyrings-cryptfile pyyaml setproctitle @@ -46,8 +57,8 @@ python3Packages.buildPythonApplication rec { websockets ]; - checkInputs = [ - python3Packages.pytestCheckHook + checkInputs = with python3Packages; [ + pytestCheckHook ]; disabledTests = [ diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/ergo/default.nix b/third_party/nixpkgs/pkgs/applications/blockchains/ergo/default.nix index 4f61be7dce..8b8ff3f48b 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/ergo/default.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/ergo/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "ergo"; - version = "4.0.11"; + version = "4.0.12"; src = fetchurl { url = "https://github.com/ergoplatform/ergo/releases/download/v${version}/ergo-${version}.jar"; - sha256 = "sha256-GzpYwytkWZBEIVmsOmK5RTJ7lPUfDeC1204FbK4O+XQ="; + sha256 = "sha256-cIMaCouzuI7UQ6UY4caGcTzA+Xp7vLdoOwIfGG+ahsU="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/exodus/default.nix b/third_party/nixpkgs/pkgs/applications/blockchains/exodus/default.nix index 8e32798dc4..08eeac760c 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/exodus/default.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/exodus/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, unzip, glib, systemd, nss, nspr, gtk3-x11, pango, -atk, cairo, gdk-pixbuf, xorg, xorg_sys_opengl, util-linux, alsaLib, dbus, at-spi2-atk, +atk, cairo, gdk-pixbuf, xorg, xorg_sys_opengl, util-linux, alsa-lib, dbus, at-spi2-atk, cups, vivaldi-ffmpeg-codecs, libpulseaudio, at-spi2-core, libxkbcommon, mesa }: stdenv.mkDerivation rec { @@ -54,7 +54,7 @@ stdenv.mkDerivation rec { util-linux xorg.libXrandr xorg.libXScrnSaver - alsaLib + alsa-lib dbus.lib at-spi2-atk at-spi2-core diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/faraday/default.nix b/third_party/nixpkgs/pkgs/applications/blockchains/faraday/default.nix index 90d76e29b6..76e91f2bbe 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/faraday/default.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/faraday/default.nix @@ -5,16 +5,16 @@ buildGoModule rec { pname = "faraday"; - version = "0.2.3-alpha"; + version = "0.2.5-alpha"; src = fetchFromGitHub { owner = "lightninglabs"; repo = "faraday"; rev = "v${version}"; - sha256 = "16cqaslsbwda23b5n0sfppybd3ma4ch545100ydxrwac4zhrq4kq"; + sha256 = "16mz333a6awii6g46gr597j31jmgws4285s693q0b87fl1ggj2zz"; }; - vendorSha256 = "1hh99nfprlmhkc36arg3w1kxby59i2l7n258cp40niv7bjn37hrq"; + vendorSha256 = "1nclmvypxp5436q6qaagp1k5bfmaia7hsykw47va0pijlsvsbmck"; subPackages = [ "cmd/frcli" "cmd/faraday" ]; @@ -22,6 +22,6 @@ buildGoModule rec { description = "LND Channel Management Tools"; homepage = "https://github.com/lightninglabs/faraday"; license = licenses.mit; - maintainers = with maintainers; [ proofofkeags ]; + maintainers = with maintainers; [ proofofkeags prusnak ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/go-ethereum.nix b/third_party/nixpkgs/pkgs/applications/blockchains/go-ethereum.nix index 4310f809ba..05bc2b824f 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/go-ethereum.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/go-ethereum.nix @@ -4,21 +4,22 @@ let # A list of binaries to put into separate outputs bins = [ "geth" + "clef" ]; in buildGoModule rec { pname = "go-ethereum"; - version = "1.10.3"; + version = "1.10.4"; src = fetchFromGitHub { owner = "ethereum"; repo = pname; rev = "v${version}"; - sha256 = "sha256-85aUR7MvaPeRilC+4oj6XW2IEUvxRUsVz63tQ/Jc7xw="; + sha256 = "sha256-DRlIiO3iXUsQnmOf5T9uk3560tVbS+Hrs8QtVkmllAI="; }; runVend = true; - vendorSha256 = "sha256-8zhVQ8FUdzog7h9RBfuq8uBp0zjulXbDOLAPljp4deA="; + vendorSha256 = "sha256-a/vY9iyqSM9QPs7lGFF6E7e2cMjIerVkNf5KwiWdyr0="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/lightning-loop/default.nix b/third_party/nixpkgs/pkgs/applications/blockchains/lightning-loop/default.nix new file mode 100644 index 0000000000..851a1b1d04 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/blockchains/lightning-loop/default.nix @@ -0,0 +1,27 @@ +{ buildGoModule +, fetchFromGitHub +, lib +}: + +buildGoModule rec { + pname = "lightning-loop"; + version = "0.14.1-beta"; + + src = fetchFromGitHub { + owner = "lightninglabs"; + repo = "loop"; + rev = "v${version}"; + sha256 = "0fnbf0cryrw9yk3z1g7innv1rxxk7h2lhfakdj994l5a0pgzghmy"; + }; + + vendorSha256 = "1i7mmf4ab4a6h08df6zlyjdnmvn44i2y3fc05hq6g1ln1bzdrz40"; + + subPackages = [ "cmd/loop" "cmd/loopd" ]; + + meta = with lib; { + description = "Lightning Loop Client"; + homepage = "https://github.com/lightninglabs/loop"; + license = licenses.mit; + maintainers = with maintainers; [ proofofkeags prusnak ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/lightning-pool/default.nix b/third_party/nixpkgs/pkgs/applications/blockchains/lightning-pool/default.nix new file mode 100644 index 0000000000..978509cc23 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/blockchains/lightning-pool/default.nix @@ -0,0 +1,27 @@ +{ buildGoModule +, fetchFromGitHub +, lib +}: + +buildGoModule rec { + pname = "lightning-pool"; + version = "0.5.0-alpha"; + + src = fetchFromGitHub { + owner = "lightninglabs"; + repo = "pool"; + rev = "v${version}"; + sha256 = "0i8qkxnrx3a89aw3v0mx7przlldl8kc0ng6g1m435366y6nzdarb"; + }; + + vendorSha256 = "04v2788w8l734n5xz6fwjbwkqlbk8q77nwncjpn7890mw75yd3rn"; + + subPackages = [ "cmd/pool" "cmd/poold" ]; + + meta = with lib; { + description = "Lightning Pool Client"; + homepage = "https://github.com/lightninglabs/pool"; + license = licenses.mit; + maintainers = with maintainers; [ proofofkeags prusnak ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/lnd.nix b/third_party/nixpkgs/pkgs/applications/blockchains/lnd.nix index 147d826dfa..e8c6d14b3d 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/lnd.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/lnd.nix @@ -6,16 +6,16 @@ buildGoModule rec { pname = "lnd"; - version = "0.12.1-beta"; + version = "0.13.0-beta"; src = fetchFromGitHub { owner = "lightningnetwork"; repo = "lnd"; rev = "v${version}"; - sha256 = "0ly6909cg0qzdsp9idp1g7zqd6liw7f142d7n7vga64s1ksvv6lx"; + sha256 = "0fwidjkfzzd7k891x5z7jrx2arl0kwj6vm9z2acsyy7riv4zfjbq"; }; - vendorSha256 = "00q8dydskzg4rhxnnpzpbmmvc3q4wzm8z3dps2bv0nx3fk0fmrl3"; + vendorSha256 = "19myr9f5zh05y6lagd9pra60y8df7pz837310cbpq9a6zzwpdxk2"; subPackages = ["cmd/lncli" "cmd/lnd"]; diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/openethereum/default.nix b/third_party/nixpkgs/pkgs/applications/blockchains/openethereum/default.nix index b4b5d13f14..be2373941b 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/openethereum/default.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/openethereum/default.nix @@ -10,18 +10,18 @@ , darwin }: -rustPlatform.buildRustPackage.override { stdenv = stdenv; } rec { +rustPlatform.buildRustPackage rec { pname = "openethereum"; - version = "3.2.5"; + version = "3.2.6"; src = fetchFromGitHub { owner = "openethereum"; repo = "openethereum"; rev = "v${version}"; - sha256 = "1g48fkznvr9fs3j9zy2d9pcwnahmyghxg2b9bsn2mxpyczmfqrki"; + sha256 = "0lxps3cyg8dzb9qr1kg91s9jc3mnm6hxybwcbhva38pcq4yc40xc"; }; - cargoSha256 = "02nlm5ariv4dr6b3rckzs7hw1xrl83yvhimrzb0g5l0j0sxh1nhc"; + cargoSha256 = "08yrpls3szmw6vy2c4d6b1k907ga0809ylvyx0zb6f8mp8z7ahl2"; nativeBuildInputs = [ cmake pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/parity-ui/env.nix b/third_party/nixpkgs/pkgs/applications/blockchains/parity-ui/env.nix index a878bbf2e3..8b7d706c01 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/parity-ui/env.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/parity-ui/env.nix @@ -1,11 +1,11 @@ -{ stdenv, lib, zlib, glib, alsaLib, dbus, gtk2, atk, pango, freetype, fontconfig +{ stdenv, lib, zlib, glib, alsa-lib, dbus, gtk2, atk, pango, freetype, fontconfig , libgnome-keyring3, gdk-pixbuf, cairo, cups, expat, libgpgerror, nspr , nss, xorg, libcap, systemd, libnotify, libsecret, gnome2 }: let packages = [ stdenv.cc.cc zlib glib dbus gtk2 atk pango freetype libgnome-keyring3 - fontconfig gdk-pixbuf cairo cups expat libgpgerror alsaLib nspr nss + fontconfig gdk-pixbuf cairo cups expat libgpgerror alsa-lib nspr nss xorg.libXrender xorg.libX11 xorg.libXext xorg.libXdamage xorg.libXtst xorg.libXcomposite xorg.libXi xorg.libXfixes xorg.libXrandr xorg.libXcursor xorg.libxkbfile xorg.libXScrnSaver libcap systemd libnotify diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/polkadot/default.nix b/third_party/nixpkgs/pkgs/applications/blockchains/polkadot/default.nix index 105686777d..8c549ee4e7 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/polkadot/default.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/polkadot/default.nix @@ -7,16 +7,16 @@ }: rustPlatform.buildRustPackage rec { pname = "polkadot"; - version = "0.9.3"; + version = "0.9.7"; src = fetchFromGitHub { owner = "paritytech"; repo = "polkadot"; rev = "v${version}"; - sha256 = "sha256-BxBrgcAJm6KM6ha494xlwiLYOSAr71gDFgqlH5RPqMM="; + sha256 = "sha256-swPLJIcm8XD0+/e9pGK2bDqUb7AS/5FdQ3A7Ceh5dZc="; }; - cargoSha256 = "131fkdazcspblzblmd9nhkymwn7qh6lhaqvi1jqnsq4951l9f4ms"; + cargoSha256 = "sha256-4njx8T3kzyN63Jo0aHee5ImqcObiADvi+dHKWcRmbQw="; nativeBuildInputs = [ clang ]; diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/stellar-core.nix b/third_party/nixpkgs/pkgs/applications/blockchains/stellar-core.nix index 197453599b..6ecc4e241c 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/stellar-core.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/stellar-core.nix @@ -40,7 +40,7 @@ stdenv.mkDerivation rec { ''; homepage = "https://www.stellar.org/"; platforms = [ "x86_64-linux" ]; - maintainers = with maintainers; [ chris-martin ]; + maintainers = with maintainers; [ ]; license = licenses.asl20; }; } diff --git a/third_party/nixpkgs/pkgs/applications/blockchains/trezor-suite/default.nix b/third_party/nixpkgs/pkgs/applications/blockchains/trezor-suite/default.nix index 585f01290b..bd9e26ae73 100644 --- a/third_party/nixpkgs/pkgs/applications/blockchains/trezor-suite/default.nix +++ b/third_party/nixpkgs/pkgs/applications/blockchains/trezor-suite/default.nix @@ -8,7 +8,7 @@ let pname = "trezor-suite"; - version = "21.5.1"; + version = "21.6.1"; name = "${pname}-${version}"; suffix = { @@ -20,8 +20,8 @@ let url = "https://github.com/trezor/${pname}/releases/download/v${version}/Trezor-Suite-${version}-${suffix}.AppImage"; # sha512 hashes are obtained from latest-linux-arm64.yml and latest-linux.yml sha512 = { - aarch64-linux = "sha512-nqwfonWySc+wBSJjC8BW9vm+v5zHbKqbbrTTRmoZdEYBJg2SthMtTULNLVpXaX9NHxr6guZnOWdBlzVk2dQkfQ=="; - x86_64-linux = "sha512-tfvdNXsjMe8YXJwTuujz4tKTdfsCuR/9VECF8EkcRP95YM7vuDV8dumru1jKtdiv0gaS1GT3SPEeAfmczY5jGg=="; + aarch64-linux = "sha512-IxWiOJEk2PHdKf4QPHH9Y5rdyhKF3aQCHJe1crS4sYrE+4BLj3rFwRPIIGhJLqzqPyW24Hw/A4lnRnDd/UpsNA=="; + x86_64-linux = "sha512-pSJ+4y9v1ltXun3F4UyQoSTJdaFSelIHx49DBbd180MSbpETecVa7OFadKjlSUKD1sknNXG9MDb2hv7SRNdDYw=="; }.${stdenv.hostPlatform.system} or (throw "Unsupported system: ${stdenv.hostPlatform.system}"); }; @@ -57,6 +57,7 @@ appimageTools.wrapType2 rec { meta = with lib; { description = "Trezor Suite - Desktop App for managing crypto"; homepage = "https://suite.trezor.io"; + changelog = "https://github.com/trezor/trezor-suite/releases/tag/v${version}"; license = licenses.unfree; maintainers = with maintainers; [ prusnak ]; platforms = [ "aarch64-linux" "x86_64-linux" ]; diff --git a/third_party/nixpkgs/pkgs/applications/editors/android-studio/common.nix b/third_party/nixpkgs/pkgs/applications/editors/android-studio/common.nix index 6d9182b9d6..42e3b7588a 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/android-studio/common.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/android-studio/common.nix @@ -1,6 +1,6 @@ { channel, pname, version, build ? null, sha256Hash }: -{ alsaLib +{ alsa-lib , bash , buildFHSUserEnv , cacert @@ -121,7 +121,7 @@ let libXrandr # For Android emulator - alsaLib + alsa-lib dbus expat libpulseaudio diff --git a/third_party/nixpkgs/pkgs/applications/editors/atom/default.nix b/third_party/nixpkgs/pkgs/applications/editors/atom/default.nix index 875f8612fd..03a4647987 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/atom/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/atom/default.nix @@ -3,14 +3,14 @@ let versions = { atom = { - version = "1.54.0"; - sha256 = "sha256-21AURgomEjuiTzeJ4MIx0mkyVi0b0mVdmFsFGNLXRP4"; + version = "1.57.0"; + sha256 = "1jzxjvaljk8p3gzjvs5bn3d128x37pcgn6by7srhs9qclc5j2664"; }; atom-beta = { - version = "1.55.0"; + version = "1.58.0"; beta = 0; - sha256 = "sha256-PICkTt54cPkDJVnXBTtSHUQVbmosOpZfVAiD5A3/n+Q="; + sha256 = "0amhilmpiwn2jfn0nrcrhzminqdp3xm5p3w3ldc3qk761pn3lbpd"; broken = true; }; }; diff --git a/third_party/nixpkgs/pkgs/applications/editors/atom/env.nix b/third_party/nixpkgs/pkgs/applications/editors/atom/env.nix index 53150e0ad6..253518b276 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/atom/env.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/atom/env.nix @@ -1,17 +1,18 @@ -{ stdenv, lib, zlib, glib, alsaLib, dbus, gtk3, atk, pango, freetype, fontconfig +{ stdenv, lib, zlib, glib, alsa-lib, dbus, gtk3, atk, pango, freetype, fontconfig , libgnome-keyring3, gdk-pixbuf, cairo, cups, expat, libgpgerror, nspr , gconf, nss, xorg, libcap, systemd, libnotify, libsecret, libuuid, at-spi2-atk -, at-spi2-core, libdbusmenu, mesa +, at-spi2-core, libdbusmenu, libdrm, mesa }: let packages = [ stdenv.cc.cc zlib glib dbus gtk3 atk pango freetype libgnome-keyring3 - fontconfig gdk-pixbuf cairo cups expat libgpgerror alsaLib nspr gconf nss + fontconfig gdk-pixbuf cairo cups expat libgpgerror alsa-lib nspr gconf nss xorg.libXrender xorg.libX11 xorg.libXext xorg.libXdamage xorg.libXtst xorg.libXcomposite xorg.libXi xorg.libXfixes xorg.libXrandr xorg.libXcursor xorg.libxkbfile xorg.libXScrnSaver libcap systemd libnotify xorg.libxcb libsecret libuuid at-spi2-atk at-spi2-core libdbusmenu + libdrm mesa # required for libgbm ]; diff --git a/third_party/nixpkgs/pkgs/applications/editors/bonzomatic/default.nix b/third_party/nixpkgs/pkgs/applications/editors/bonzomatic/default.nix index 9ccd549693..5b1fc966dd 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/bonzomatic/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/bonzomatic/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchFromGitHub , cmake, makeWrapper -, alsaLib, fontconfig, mesa_glu, libXcursor, libXinerama, libXrandr, xorg +, alsa-lib, fontconfig, mesa_glu, libXcursor, libXinerama, libXrandr, xorg }: stdenv.mkDerivation rec { @@ -16,12 +16,12 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake makeWrapper ]; buildInputs = [ - alsaLib fontconfig mesa_glu + alsa-lib fontconfig mesa_glu libXcursor libXinerama libXrandr xorg.xinput xorg.libXi xorg.libXext ]; postFixup = '' - wrapProgram $out/bin/bonzomatic --prefix LD_LIBRARY_PATH : "${alsaLib}/lib" + wrapProgram $out/bin/bonzomatic --prefix LD_LIBRARY_PATH : "${alsa-lib}/lib" ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/editors/edbrowse/0001-small-fixes.patch b/third_party/nixpkgs/pkgs/applications/editors/edbrowse/0001-small-fixes.patch new file mode 100644 index 0000000000..433b884cc5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/editors/edbrowse/0001-small-fixes.patch @@ -0,0 +1,20 @@ +diff -Naur source.old/src/makefile source/src/makefile +--- source.old/src/makefile 1969-12-31 21:00:01.000000000 -0300 ++++ source/src/makefile 2021-06-07 18:58:48.851231787 -0300 +@@ -101,14 +101,14 @@ + + # need packages nodejs and libnode-dev + js_hello_v8 : js_hello_v8.cpp +- g++ -I/usr/include/v8 js_hello_v8.cpp -lv8 -lstdc++ -o js_hello_v8 ++ $(CXX) -I/usr/include/v8 js_hello_v8.cpp -lv8 -lstdc++ -o js_hello_v8 + + HELLOEXTRA = stringfile.o messages.o msg-strings.o startwindow.o ebrc.o format.o http.o isup.o fetchmail.o sendmail.o plugin.o buffers.o dbstubs.o html.o decorate.o html-tidy.o css.o + js_hello_moz : js_hello_moz.o $(HELLOEXTRA) jseng-moz.o + $(CC) js_hello_moz.o $(HELLOEXTRA) jseng-moz.o $(LDFLAGS) -lmozjs-$(SMV) -lstdc++ -o $@ + + js_hello_quick : js_hello_quick.c +- gcc $(CFLAGS) js_hello_quick.c stringfile.o messages.o msg-strings.o ebrc.o format.o -o js_hello_quick -L/usr/local/lib/quickjs -lquickjs -lm -ldl -lpthread -latomic ++ $(CC) $(CFLAGS) js_hello_quick.c stringfile.o messages.o msg-strings.o ebrc.o format.o -o js_hello_quick $(QUICKJS_LDFLAGS) -lm -lpthread + + hello: js_hello_duk js_hello_v8 js_hello_moz js_hello_quick + diff --git a/third_party/nixpkgs/pkgs/applications/editors/edbrowse/default.nix b/third_party/nixpkgs/pkgs/applications/editors/edbrowse/default.nix index 86cc81a58c..5b37b86556 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/edbrowse/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/edbrowse/default.nix @@ -1,41 +1,79 @@ -{ lib, stdenv, fetchFromGitHub, duktape, curl, pcre, readline, openssl, perl, html-tidy }: +{ lib +, stdenv +, fetchFromGitHub +, curl +, duktape +, html-tidy +, openssl +, pcre +, perl +, pkg-config +, quickjs +, readline +, which +}: stdenv.mkDerivation rec { pname = "edbrowse"; - version = "3.7.7"; + version = "3.8.0"; - buildInputs = [ curl pcre readline openssl duktape perl html-tidy ]; + src = fetchFromGitHub { + owner = "CMB"; + repo = pname; + rev = "v${version}"; + hash = "sha256-ZXxzQBAmu7kM3sjqg/rDLBXNucO8sFRFKXV8UxQVQZU="; + }; + + nativeBuildInputs = [ + pkg-config + which + ]; + buildInputs = [ + curl + duktape + html-tidy + openssl + pcre + perl + quickjs + readline + ]; + + patches = [ + # Fixes some small annoyances on src/makefile + ./0001-small-fixes.patch + ]; postPatch = '' - for i in ./tools/*.pl - do - substituteInPlace $i --replace "/usr/bin/perl" "${perl}/bin/perl" + substituteInPlace src/makefile --replace\ + '-L/usr/local/lib/quickjs' '-L${quickjs}/lib/quickjs' + for i in $(find ./tools/ -type f ! -name '*.c'); do + patchShebangs $i done ''; makeFlags = [ "-C" "src" - "prefix=${placeholder "out"}" + "PREFIX=${placeholder "out"}" ]; - src = fetchFromGitHub { - owner = "CMB"; - repo = "edbrowse"; - rev = "v${version}"; - sha256 = "0cw9d60mdhwna57r1vxn53s8gl81rr3cxnvm769ifq3xyh49vfcf"; - }; meta = with lib; { + homepage = "https://edbrowse.org/"; description = "Command Line Editor Browser"; longDescription = '' - Edbrowse is a combination editor, browser, and mail client that is 100% text based. - The interface is similar to /bin/ed, though there are many more features, such as editing multiple files simultaneously, and rendering html. - This program was originally written for blind users, but many sighted users have taken advantage of the unique scripting capabilities of this program, which can be found nowhere else. - A batch job, or cron job, can access web pages on the internet, submit forms, and send email, with no human intervention whatsoever. - edbrowse can also tap into databases through odbc. It was primarily written by Karl Dahlke. - ''; + Edbrowse is a combination editor, browser, and mail client that is 100% + text based. The interface is similar to /bin/ed, though there are many + more features, such as editing multiple files simultaneously, and + rendering html. This program was originally written for blind users, but + many sighted users have taken advantage of the unique scripting + capabilities of this program, which can be found nowhere else. A batch + job, or cron job, can access web pages on the internet, submit forms, and + send email, with no human intervention whatsoever. edbrowse can also tap + into databases through odbc. It was primarily written by Karl Dahlke. + ''; license = licenses.gpl1Plus; - homepage = "https://edbrowse.org/"; maintainers = with maintainers; [ schmitthenner vrthra equirosa ]; platforms = platforms.linux; }; } +# TODO: send the patch to upstream developers diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/27.nix b/third_party/nixpkgs/pkgs/applications/editors/emacs/27.nix index b629c2d212..e0e41a78b9 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/emacs/27.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/27.nix @@ -1,7 +1,12 @@ import ./generic.nix (rec { version = "27.2"; sha256 = "sha256-tKfMTnjmPzeGJOCRkhW5EK9bsqCvyBn60pgnLp9Awbk="; - patches = [ + patches = fetchpatch: [ ./tramp-detect-wrapped-gvfsd.patch + (fetchpatch { + name = "fix-aarch64-darwin-triplet.patch"; + url = "https://git.savannah.gnu.org/cgit/emacs.git/patch/?id=a88f63500e475f842e5fbdd9abba4ce122cdb082"; + sha256 = "sha256-RF9b5PojFUAjh2TDUW4+HaWveV30Spy1iAXhaWf1ZVg="; + }) ]; }) diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/ebuild-mode/default.nix b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/ebuild-mode/default.nix new file mode 100644 index 0000000000..1e4036b4c2 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/ebuild-mode/default.nix @@ -0,0 +1,17 @@ +{ lib, trivialBuild, fetchurl }: + +trivialBuild rec { + pname = "ebuild-mode"; + version = "1.52"; + + src = fetchurl { + url = "https://dev.gentoo.org/~ulm/emacs/ebuild-mode-${version}.tar.xz"; + sha256 = "10nikbbwh612qlnms2i31963a0h3ccyg85vrxlizdpsqs4cjpg6h"; + }; + + meta = with lib; { + description = "Major modes for Gentoo package files"; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ qyliss ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/elpa-generated.nix b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/elpa-generated.nix index 8012d85137..946cef998c 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/elpa-generated.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/elpa-generated.nix @@ -238,10 +238,10 @@ elpaBuild { pname = "auctex"; ename = "auctex"; - version = "13.0.11"; + version = "13.0.12"; src = fetchurl { - url = "https://elpa.gnu.org/packages/auctex-13.0.11.tar"; - sha256 = "0sy4f1n38q58vyzw5l0f80ci3j99rb25gbwj0frl0pglfmgzl44k"; + url = "https://elpa.gnu.org/packages/auctex-13.0.12.tar"; + sha256 = "0fx3l6yyq63mlnapxiqpdhi5l314r3aj63404nly6hcdvc28g9nm"; }; packageRequires = [ emacs ]; meta = { @@ -636,6 +636,21 @@ license = lib.licenses.free; }; }) {}; + consult = callPackage ({ elpaBuild, emacs, fetchurl, lib }: + elpaBuild { + pname = "consult"; + ename = "consult"; + version = "0.8"; + src = fetchurl { + url = "https://elpa.gnu.org/packages/consult-0.8.tar"; + sha256 = "0vkq8dsj6k3gsdhiyg6ccv49fqgjw6f0db4wjsvm5zbkadjvlm86"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://elpa.gnu.org/packages/consult.html"; + license = lib.licenses.free; + }; + }) {}; context-coloring = callPackage ({ elpaBuild, emacs, fetchurl, lib }: elpaBuild { pname = "context-coloring"; @@ -816,6 +831,21 @@ license = lib.licenses.free; }; }) {}; + devdocs = callPackage ({ elpaBuild, emacs, fetchurl, lib }: + elpaBuild { + pname = "devdocs"; + ename = "devdocs"; + version = "0.1"; + src = fetchurl { + url = "https://elpa.gnu.org/packages/devdocs-0.1.tar"; + sha256 = "1ps2jpp1ckq9839l63p6npqrf85b8zb5akwvjvv7fkm8nvspdkil"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://elpa.gnu.org/packages/devdocs.html"; + license = lib.licenses.free; + }; + }) {}; dict-tree = callPackage ({ elpaBuild, fetchurl, heap, lib, tNFA, trie }: elpaBuild { pname = "dict-tree"; @@ -906,16 +936,16 @@ license = lib.licenses.free; }; }) {}; - dismal = callPackage ({ cl-lib ? null, elpaBuild, fetchurl, lib }: + dismal = callPackage ({ cl-lib ? null, elpaBuild, emacs, fetchurl, lib }: elpaBuild { pname = "dismal"; ename = "dismal"; - version = "1.5"; + version = "1.5.2"; src = fetchurl { - url = "https://elpa.gnu.org/packages/dismal-1.5.tar"; - sha256 = "1vhs6w6c2klsrfjpw8vr5c4gwiw83ppdjhsn2la0fvkm60jmc476"; + url = "https://elpa.gnu.org/packages/dismal-1.5.2.tar"; + sha256 = "0pl5cnziilm4ps1xzh1fa8irazn7vcp9nsxnxcvjqbkflpcpq5c7"; }; - packageRequires = [ cl-lib ]; + packageRequires = [ cl-lib emacs ]; meta = { homepage = "https://elpa.gnu.org/packages/dismal.html"; license = lib.licenses.free; @@ -985,10 +1015,10 @@ elpaBuild { pname = "ebdb"; ename = "ebdb"; - version = "0.6.22"; + version = "0.6.23"; src = fetchurl { - url = "https://elpa.gnu.org/packages/ebdb-0.6.22.tar"; - sha256 = "0dljl21n6508c7ash7l6zgxhpn2wdfzga0va63d4k9nwnqmkvsgz"; + url = "https://elpa.gnu.org/packages/ebdb-0.6.23.tar"; + sha256 = "0j3jvy9s606qjqcmcjzgck3dp8bhpgly2g00wnswzcgk4makdzld"; }; packageRequires = [ cl-lib emacs seq ]; meta = { @@ -1045,10 +1075,10 @@ elpaBuild { pname = "eev"; ename = "eev"; - version = "20210512"; + version = "20210607"; src = fetchurl { - url = "https://elpa.gnu.org/packages/eev-20210512.tar"; - sha256 = "0dj49lpqv5vsx02h8mla8cmv5cr5f2qbz74f9dn8q4adpzxsajin"; + url = "https://elpa.gnu.org/packages/eev-20210607.tar"; + sha256 = "0avd58m8630s4d3ys9g84csscdmf2y1swwwkgzjkrrq8q0j5yd3l"; }; packageRequires = [ emacs ]; meta = { @@ -1241,10 +1271,10 @@ elpaBuild { pname = "excorporate"; ename = "excorporate"; - version = "0.9.6"; + version = "1.0.0"; src = fetchurl { - url = "https://elpa.gnu.org/packages/excorporate-0.9.6.tar"; - sha256 = "0ljav8g1npg0a36x1xxpfs2gvk622fh3si95s3w2vmwa27ynirzj"; + url = "https://elpa.gnu.org/packages/excorporate-1.0.0.tar"; + sha256 = "1g0wc2kp15ra323b4rxvdh58q9c4h7m20grw6a0cs53m7l9xi62f"; }; packageRequires = [ cl-lib @@ -1742,10 +1772,10 @@ elpaBuild { pname = "isearch-mb"; ename = "isearch-mb"; - version = "0.2"; + version = "0.3"; src = fetchurl { - url = "https://elpa.gnu.org/packages/isearch-mb-0.2.tar"; - sha256 = "1mfjppv33cb5f5f6cc1486msxjxfjnnkryc1yax43k6fgzjr0j4h"; + url = "https://elpa.gnu.org/packages/isearch-mb-0.3.tar"; + sha256 = "01yq1skc6rm9yp80vz2fhh9lbkdb9nhf57h424mrkycdky2w50mx"; }; packageRequires = [ emacs ]; meta = { @@ -1987,10 +2017,10 @@ elpaBuild { pname = "leaf"; ename = "leaf"; - version = "4.4.4"; + version = "4.4.8"; src = fetchurl { - url = "https://elpa.gnu.org/packages/leaf-4.4.4.tar"; - sha256 = "1npg06zmy21kg2qsqgfm03l7vjib697i96awypcdb0hw5mvmc1a1"; + url = "https://elpa.gnu.org/packages/leaf-4.4.8.tar"; + sha256 = "0h0ksmgrhn29ci6z8y54dbbzcqlvfs1ra0kmf226gz0dqzk45vb3"; }; packageRequires = [ emacs ]; meta = { @@ -2118,6 +2148,21 @@ license = lib.licenses.free; }; }) {}; + marginalia = callPackage ({ elpaBuild, emacs, fetchurl, lib }: + elpaBuild { + pname = "marginalia"; + ename = "marginalia"; + version = "0.6"; + src = fetchurl { + url = "https://elpa.gnu.org/packages/marginalia-0.6.tar"; + sha256 = "05pwaz9643shxnv63l6r9m2c0qf1nc1hy6jiqw01bkvvgg8g4jag"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://elpa.gnu.org/packages/marginalia.html"; + license = lib.licenses.free; + }; + }) {}; markchars = callPackage ({ elpaBuild, fetchurl, lib }: elpaBuild { pname = "markchars"; @@ -2276,10 +2321,10 @@ elpaBuild { pname = "modus-themes"; ename = "modus-themes"; - version = "1.3.2"; + version = "1.4.0"; src = fetchurl { - url = "https://elpa.gnu.org/packages/modus-themes-1.3.2.tar"; - sha256 = "085zi3ckf4s1kjskqb04b78rgrhbdhrrp74yksb5w0hl58bd8rsc"; + url = "https://elpa.gnu.org/packages/modus-themes-1.4.0.tar"; + sha256 = "0ssckl06jk08vaq4g7sxpzvc3ybm339fzbn9qw21w82v1l60rzpm"; }; packageRequires = [ emacs ]; meta = { @@ -2784,10 +2829,10 @@ elpaBuild { pname = "posframe"; ename = "posframe"; - version = "1.0.2"; + version = "1.0.3"; src = fetchurl { - url = "https://elpa.gnu.org/packages/posframe-1.0.2.tar"; - sha256 = "19a1dkjyw9m74aamyqrsvzrdwshngqpmjzdngx6v5nifvcilrlnk"; + url = "https://elpa.gnu.org/packages/posframe-1.0.3.tar"; + sha256 = "0c3lnrydsysv8j25brgc0cckf1hz54yhkginncmw81y1ia43rqmx"; }; packageRequires = [ emacs ]; meta = { @@ -2844,10 +2889,10 @@ elpaBuild { pname = "pyim"; ename = "pyim"; - version = "3.7.6"; + version = "3.7.9"; src = fetchurl { - url = "https://elpa.gnu.org/packages/pyim-3.7.6.tar"; - sha256 = "1crimmvyppjmds9shfvxy9j5zi3mk133bv5av0fgicm7ddkivksr"; + url = "https://elpa.gnu.org/packages/pyim-3.7.9.tar"; + sha256 = "00ff1izdwcy53dcwpdn18wwndnw2jsw4bhg8gkqaa60xm468xzkl"; }; packageRequires = [ async emacs xr ]; meta = { @@ -3340,10 +3385,10 @@ elpaBuild { pname = "shell-command-plus"; ename = "shell-command+"; - version = "2.1.0"; + version = "2.2.0"; src = fetchurl { - url = "https://elpa.gnu.org/packages/shell-command+-2.1.0.tar"; - sha256 = "1jyrnv89989bi03m5h8dj0cllsw3rvyxkiyfrh9v6gpxjwfy8lmq"; + url = "https://elpa.gnu.org/packages/shell-command+-2.2.0.tar"; + sha256 = "1ms2xk7xfgd3ngwm90hnmlxwpvyb167bislc2wr3ilfrirbbw476"; }; packageRequires = [ emacs ]; meta = { @@ -3734,10 +3779,10 @@ elpaBuild { pname = "tramp"; ename = "tramp"; - version = "2.5.0.4"; + version = "2.5.0.5"; src = fetchurl { - url = "https://elpa.gnu.org/packages/tramp-2.5.0.4.tar"; - sha256 = "0yk4ckk45gkjp24nfywz49j8pazq33m6pga3lirb5h6zc8an5z24"; + url = "https://elpa.gnu.org/packages/tramp-2.5.0.5.tar"; + sha256 = "1dclxffynfacvwi2scpda35sxjb42603yyf2p0477qa9b0i4xha0"; }; packageRequires = [ emacs ]; meta = { @@ -3779,10 +3824,10 @@ elpaBuild { pname = "transient"; ename = "transient"; - version = "0.3.2"; + version = "0.3.4"; src = fetchurl { - url = "https://elpa.gnu.org/packages/transient-0.3.2.tar"; - sha256 = "10zqa245dn6z689z7ap6nx6q9s95whzgybpwl2slpmnawxix2q6i"; + url = "https://elpa.gnu.org/packages/transient-0.3.4.tar"; + sha256 = "1m71w52cr8f9wm6lybfa003w408lkrl6q9whs53hpp3pl5phhfvb"; }; packageRequires = [ emacs ]; meta = { @@ -3970,10 +4015,10 @@ elpaBuild { pname = "vertico"; ename = "vertico"; - version = "0.10"; + version = "0.11"; src = fetchurl { - url = "https://elpa.gnu.org/packages/vertico-0.10.tar"; - sha256 = "07bzhxgp3k6q4wl9ijhx4vg8diinn782xhr8axn790a5vj199j78"; + url = "https://elpa.gnu.org/packages/vertico-0.11.tar"; + sha256 = "0hzwddkac85i449173az8crlksj9ivrqf969r81kbr45ksgr1ij6"; }; packageRequires = [ emacs ]; meta = { @@ -4093,10 +4138,10 @@ elpaBuild { pname = "webfeeder"; ename = "webfeeder"; - version = "1.1.1"; + version = "1.1.2"; src = fetchurl { - url = "https://elpa.gnu.org/packages/webfeeder-1.1.1.tar"; - sha256 = "09caj12hfdfhlbcsmjyhw728w1f7yq13hdslh793yvfqv83ipvc4"; + url = "https://elpa.gnu.org/packages/webfeeder-1.1.2.tar"; + sha256 = "1l128q424qsq9jv2wk8cv4zli71rk34q5kgwa9axdz0d27p9l6v4"; }; packageRequires = [ emacs ]; meta = { diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/manual-packages.nix b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/manual-packages.nix index f862a1ae8a..b2a66c92ae 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/manual-packages.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/manual-packages.nix @@ -3,20 +3,25 @@ elisp-ffi = melpaBuild rec { pname = "elisp-ffi"; version = "1.0.0"; + src = pkgs.fetchFromGitHub { owner = "skeeto"; repo = "elisp-ffi"; rev = version; sha256 = "0z2n3h5l5fj8wl8i1ilfzv11l3zba14sgph6gz7dx7q12cnp9j22"; }; + buildInputs = [ pkgs.libffi ]; + preBuild = "make"; + recipe = pkgs.writeText "recipe" '' (elisp-ffi :repo "skeeto/elisp-ffi" :fetcher github :files ("ffi-glue" "ffi.el")) ''; + meta = { description = "Emacs Lisp Foreign Function Interface"; longDescription = '' @@ -65,27 +70,22 @@ }; }; - apheleia = callPackage ./apheleia {}; - - emacspeak = callPackage ./emacspeak {}; - - ess-R-object-popup = - callPackage ./ess-R-object-popup { }; - - evil-markdown = callPackage ./evil-markdown { }; - - font-lock-plus = callPackage ./font-lock-plus { }; - ghc-mod = melpaBuild { pname = "ghc"; version = pkgs.haskellPackages.ghc-mod.version; + src = pkgs.haskellPackages.ghc-mod.src; + packageRequires = [ haskell-mode ]; + propagatedUserEnvPkgs = [ pkgs.haskellPackages.ghc-mod ]; + recipe = pkgs.writeText "recipe" '' (ghc-mod :repo "DanielG/ghc-mod" :fetcher github :files ("elisp/*.el")) ''; + fileSpecs = [ "elisp/*.el" ]; + meta = { description = "An extension of haskell-mode that provides completion of symbols and documentation browsing"; license = bsd3; @@ -97,32 +97,28 @@ haskell-unicode-input-method = melpaBuild { pname = "emacs-haskell-unicode-input-method"; version = "20110905.2307"; + src = pkgs.fetchFromGitHub { owner = "roelvandijk"; repo = "emacs-haskell-unicode-input-method"; rev = "d8d168148c187ed19350bb7a1a190217c2915a63"; sha256 = "09b7bg2s9aa4s8f2kdqs4xps3jxkq5wsvbi87ih8b6id38blhf78"; }; + recipe = pkgs.writeText "recipe" '' (emacs-haskell-unicode-input-method :repo "roelvandijk/emacs-haskell-unicode-input-method" :fetcher github) ''; + packageRequires = []; + meta = { homepage = "https://melpa.org/#haskell-unicode-input-method/"; license = lib.licenses.free; }; }; - helm-words = callPackage ./helm-words { }; - - isearch-plus = callPackage ./isearch-plus { }; - - isearch-prop = callPackage ./isearch-prop { }; - - jam-mode = callPackage ./jam-mode { }; - llvm-mode = trivialBuild { pname = "llvm-mode"; inherit (pkgs.llvmPackages.llvm) src version; @@ -150,6 +146,7 @@ }; patches = [ + # Fix: avatar loading when imagemagick support is not available (pkgs.fetchpatch { url = "https://github.com/alphapapa/matrix-client.el/commit/5f49e615c7cf2872f48882d3ee5c4a2bff117d07.patch"; sha256 = "07bvid7s1nv1377p5n61q46yww3m1w6bw4vnd4iyayw3fby1lxbm"; @@ -187,11 +184,6 @@ }; - mu4e-patch = callPackage ./mu4e-patch { }; - - org-mac-link = - callPackage ./org-mac-link { }; - ott-mode = self.trivialBuild { pname = "ott-mod"; @@ -205,11 +197,30 @@ }; }; - perl-completion = - callPackage ./perl-completion { }; + # Packages made the classical callPackage way + + ebuild-mode = callPackage ./ebuild-mode { }; + + emacspeak = callPackage ./emacspeak { }; + + ess-R-object-popup = callPackage ./ess-R-object-popup { }; + + font-lock-plus = callPackage ./font-lock-plus { }; + + helm-words = callPackage ./helm-words { }; + + jam-mode = callPackage ./jam-mode { }; + + nano-theme = callPackage ./nano-theme { }; + + org-mac-link = callPackage ./org-mac-link { }; + + perl-completion = callPackage ./perl-completion { }; pod-mode = callPackage ./pod-mode { }; + power-mode = callPackage ./power-mode { }; + railgun = callPackage ./railgun { }; structured-haskell-mode = self.shm; @@ -243,34 +254,34 @@ # closer to the old outdated package infra. # # Ideally this should be dropped some time during/after 20.03 + + autoComplete = self.melpaStablePackages.auto-complete; bbdb3 = self.melpaStablePackages.bbdb; - jade = self.jade-mode; - # scalaMode2 = null; # No clear mapping as of now - flymakeCursor = self.melpaStablePackages.flymake-cursor; + colorTheme = self.color-theme; cryptol = self.melpaStablePackages.cryptol-mode; + d = self.melpaStablePackages.d-mode; + emacsw3m = self.w3m; + erlangMode = self.melpaStablePackages.erlang; + flymakeCursor = self.melpaStablePackages.flymake-cursor; + graphvizDot = self.melpaStablePackages.graphviz-dot-mode; + haskellMode = self.melpaStablePackages.haskell-mode; + hsc3Mode = self.hsc3-mode; + idris = self.melpaStablePackages.idris-mode; + jade = self.jade-mode; + js2 = self.melpaStablePackages.js2-mode; + loremIpsum = self.lorem-ipsum; + markdownMode = self.melpaStablePackages.markdown-mode; maudeMode = self.maude-mode; phpMode = self.melpaStablePackages.php-mode; - idris = self.melpaStablePackages.idris-mode; - rainbowDelimiters = self.melpaStablePackages.rainbow-delimiters; - colorTheme = self.color-theme; - sbtMode = self.melpaStablePackages.sbt-mode; - markdownMode = self.melpaStablePackages.markdown-mode; - scalaMode1 = self.melpaStablePackages.scala-mode; prologMode = self.prolog-mode; - hsc3Mode = self.hsc3-mode; - graphvizDot = self.melpaStablePackages.graphviz-dot-mode; - proofgeneral_HEAD = self.proof-general; proofgeneral = self.melpaStablePackages.proof-general; - haskellMode = self.melpaStablePackages.haskell-mode; - writeGood = self.melpaStablePackages.writegood-mode; - erlangMode = self.melpaStablePackages.erlang; - d = self.melpaStablePackages.d-mode; - autoComplete = self.melpaStablePackages.auto-complete; - tuaregMode = self.melpaStablePackages.tuareg; + proofgeneral_HEAD = self.proof-general; + rainbowDelimiters = self.melpaStablePackages.rainbow-delimiters; + sbtMode = self.melpaStablePackages.sbt-mode; + scalaMode1 = self.melpaStablePackages.scala-mode; + # scalaMode2 = null; # No clear mapping as of now structuredHaskellMode = self.melpaStablePackages.shm; + tuaregMode = self.melpaStablePackages.tuareg; + writeGood = self.melpaStablePackages.writegood-mode; xmlRpc = self.melpaStablePackages.xml-rpc; - emacsw3m = self.w3m; - loremIpsum = self.lorem-ipsum; - js2 = self.melpaStablePackages.js2-mode; - } diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/melpa-packages.nix b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/melpa-packages.nix index e55a920e36..051759cb8c 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/melpa-packages.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/melpa-packages.nix @@ -8,7 +8,7 @@ To update the list of packages from MELPA, 2. Check for evaluation errors: env NIXPKGS_ALLOW_BROKEN=1 nix-instantiate --show-trace ../../../../../ -A emacs.pkgs.melpaStablePackages env NIXPKGS_ALLOW_BROKEN=1 nix-instantiate --show-trace ../../../../../ -A emacs.pkgs.melpaPackages -3. Run `git commit -m "melpa-packages: $(date -Idate)" recipes-archive-melpa.json` +3. Run `git commit -m "melpa-packages $(date -Idate)" recipes-archive-melpa.json` ## Update from overlay diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/nano-theme/default.nix b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/nano-theme/default.nix new file mode 100644 index 0000000000..8034f41a72 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/nano-theme/default.nix @@ -0,0 +1,30 @@ +{ lib +, stdenv +, fetchFromGitHub +, emacs +}: + +stdenv.mkDerivation rec { + pname = "nano-theme"; + version = "2021-06-05"; + + src = fetchFromGitHub { + owner = "rougier"; + repo = pname; + rev = "99ff1c5e78296a073c6e63b966045e0d83a136e7"; + hash = "sha256-IDVnl4J4hx2mlLaiA+tKxxRGcIyBULr2HBeY/GMHD90="; + }; + + installPhase = '' + runHook preInstall + mkdir -p $out/share/emacs/site-lisp + install *.el $out/share/emacs/site-lisp + runHook postInstall + ''; + + meta = { + homepage = "https://github.com/rougier/nano-theme"; + description = "GNU Emacs / N Λ N O Theme"; + inherit (emacs.meta) platforms; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/org-generated.nix b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/org-generated.nix index 83c3a97727..b70032982c 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/org-generated.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/org-generated.nix @@ -4,10 +4,10 @@ elpaBuild { pname = "org"; ename = "org"; - version = "20210519"; + version = "20210607"; src = fetchurl { - url = "https://orgmode.org/elpa/org-20210519.tar"; - sha256 = "14vchfg69wai1yxv1fzvjk185gnfr7d9qrdijf0qmbbr5znci8rf"; + url = "https://orgmode.org/elpa/org-20210607.tar"; + sha256 = "178z9bnzcdaymnwxf0kkw1yzlzkj5dmdjjwdklc9qb9iv6rckfji"; }; packageRequires = []; meta = { @@ -19,10 +19,10 @@ elpaBuild { pname = "org-plus-contrib"; ename = "org-plus-contrib"; - version = "20210519"; + version = "20210607"; src = fetchurl { - url = "https://orgmode.org/elpa/org-plus-contrib-20210519.tar"; - sha256 = "0g765fsc7ssn779xnhjzrxy1sz5b019h7dk1q26yk2w6i540ybfl"; + url = "https://orgmode.org/elpa/org-plus-contrib-20210607.tar"; + sha256 = "03liivgfcmp0lh6p57bh2gyn85n3sc4p91y374kq8kzc7fzrgzyr"; }; packageRequires = []; meta = { diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/power-mode/default.nix b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/power-mode/default.nix new file mode 100644 index 0000000000..035c906c8a --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/power-mode/default.nix @@ -0,0 +1,30 @@ +{ lib +, stdenv +, fetchFromGitHub +, emacs +}: + +stdenv.mkDerivation rec { + pname = "power-mode"; + version = "2021-06-06"; + + src = fetchFromGitHub { + owner = "elizagamedev"; + repo = "power-mode.el"; + rev = "940e0aa36220f863e8f43840b4ed634b464fbdbb"; + hash = "sha256-Wy8o9QTWqvH9cP7xsTpF5QSd4mWNIPXJTadoADKeHWY="; + }; + + installPhase = '' + runHook preInstall + mkdir -p $out/share/emacs/site-lisp + install *.el $out/share/emacs/site-lisp + runHook postInstall + ''; + + meta = { + homepage = "https://github.com/rougier/nano-theme"; + description = "Imbue Emacs with power!"; + inherit (emacs.meta) platforms; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/recipes-archive-melpa.json b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/recipes-archive-melpa.json index 7675abd502..1429040e41 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/recipes-archive-melpa.json +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/recipes-archive-melpa.json @@ -198,11 +198,11 @@ "repo": "ymarco/auto-activating-snippets", "unstable": { "version": [ - 20210417, - 1134 + 20210605, + 1143 ], - "commit": "3076cefea0f6ae9d7757f13c27b5602e007b58ec", - "sha256": "1psy6qpqxh6dm2ix7pwqdcq0rbiy6hyd830g76jk4wvj4spm5rpf" + "commit": "118ed7fc948b6d91eea727df35a1639521bf5fdb", + "sha256": "0qnsyvvb0knarvd4lvnzazf8y756iwx435zswym5lwsw5v847l8d" }, "stable": { "version": [ @@ -1036,15 +1036,15 @@ "version": [ 2, 4, - 0 + 1 ], "deps": [ "ac-php-core", "auto-complete", "yasnippet" ], - "commit": "33ed12bb2ec627a8a05360885f071e4a88fff399", - "sha256": "1ffayysbqh7vq65vhbmqg9yp03fqfnwj3drwyinr5ia81acp37nz" + "commit": "9770c95bf2df93d9cb0f200723b03b3d9a480640", + "sha256": "188z1i209z61nwfcgffgp90rdcsnl75izxpqv4x1vbaay5fvg33f" } }, { @@ -1073,7 +1073,7 @@ "version": [ 2, 4, - 0 + 1 ], "deps": [ "dash", @@ -1083,8 +1083,8 @@ "s", "xcscope" ], - "commit": "33ed12bb2ec627a8a05360885f071e4a88fff399", - "sha256": "1ffayysbqh7vq65vhbmqg9yp03fqfnwj3drwyinr5ia81acp37nz" + "commit": "9770c95bf2df93d9cb0f200723b03b3d9a480640", + "sha256": "188z1i209z61nwfcgffgp90rdcsnl75izxpqv4x1vbaay5fvg33f" } }, { @@ -1597,10 +1597,10 @@ }, { "ename": "acme-theme", - "commit": "0bf14d91ff89556671b175d5f7e71066f27cb73d", - "sha256": "0zsrqvhly3si2qkvc4rhki89r2z185l684wf7j9kx32fgaaqanac", + "commit": "1b9a64eee8e5b3f75f873654fd6102fc4aaf5e10", + "sha256": "09079yjzc9dk052r5fjq9sxps2yld6rl36k6f58xj2rvghzdsbwc", "fetcher": "github", - "repo": "ianpan870102/acme-emacs-theme", + "repo": "ianyepan/acme-emacs-theme", "unstable": { "version": [ 20210430, @@ -1855,6 +1855,24 @@ "sha256": "0nz1lf77qr3vm90rm02d4inw8glav722rxsiqds76m4xsjrq02m7" } }, + { + "ename": "affe", + "commit": "84b0a313d4246b6e0c0541300a62c4ed37a71cbf", + "sha256": "1x0w6zl8ivv2lbj3qncqmvgh09p8q5zljhqxylsi3kc13xkv9d0p", + "fetcher": "github", + "repo": "minad/affe", + "unstable": { + "version": [ + 20210603, + 1139 + ], + "deps": [ + "consult" + ], + "commit": "dee51350e1d7d3cfbfb12069dea9246454a3df31", + "sha256": "1dpzwwbkwxmkh430hk3w9p6z1rwns5znzbar071h95gi7phyhm2x" + } + }, { "ename": "afternoon-theme", "commit": "583256b7fa48501c8bfad305d76d2e16b6441539", @@ -1918,18 +1936,23 @@ "annotation", "eri" ], - "commit": "ed6730a1717a0e3ddc25a75de0c2e109371391c7", - "sha256": "0zlx4xh5c5d88zfbbwd79qb56mrvd3fhgqd7r64p6gx9gfa6kbi5" + "commit": "044843c5281a7bdb9479317793a75c8c0fcfadd9", + "sha256": "04lirb2p1h46c1l84ysdnr2jxvzsdw1zv6jhm7h8ybgzmaa65b6m" }, "stable": { "version": [ 2, 6, 1, - 3 + 3, + 20210605 ], - "commit": "e5486b79cc78689e3fd07b6c924d0085063915ea", - "sha256": "1zl7c0rb5rg867a431apxlzj2flg3hjidamqa5prc1bzpmfaywyz" + "deps": [ + "annotation", + "eri" + ], + "commit": "ab805592a0ae7066fbd5fa5f47e933194fce878f", + "sha256": "19ld12x4is0nx52i05zv20js0zysx3bljbdn2nr65vy11dq2cyyp" } }, { @@ -2286,6 +2309,32 @@ "sha256": "0nffxpdm0sa7bynwi0rmlwpc4qmvbda5ankhzz7fmk4ap9fkjxv9" } }, + { + "ename": "alectryon", + "commit": "4f7b6099b9167840602515f10ab02e70defbee1e", + "sha256": "0q1dsnrjak49dlmwkns79n996ip6zsdsv4k2ifgd9r8fd9yxki22", + "fetcher": "github", + "repo": "cpitclaudel/alectryon", + "unstable": { + "version": [ + 20210518, + 1550 + ], + "deps": [ + "flycheck" + ], + "commit": "df5664e71c1026af4aaf69e6b227d427a728e7c6", + "sha256": "1czy3sbwm6lfrgdbj0y12q4n70w6zg8g3y27iz1zr4y20hhcp2zk" + }, + "stable": { + "version": [ + 1, + 0 + ], + "commit": "55fc849cdb7a05bbaab6f9359386d8830bdcfb87", + "sha256": "0v5jfmqcvridh8z7y8i5hklybfxicgmbnambi21ml34px3p9fldc" + } + }, { "ename": "alert", "commit": "113953825ac4ff98d90a5375eb48d8b7bfa224e7", @@ -2378,23 +2427,20 @@ "repo": "domtronn/all-the-icons.el", "unstable": { "version": [ - 20210513, - 1918 + 20210603, + 1604 ], - "commit": "be99987eda1ba3fdc490984b207849689599b858", - "sha256": "0a0yva34hrz7d1zq9p6bn69ywc2zpi6zpwb2s5g1lbh23cihvi1g" + "commit": "facbde4a7be292bf9490932cbe403b443273f45d", + "sha256": "0lwgvgnqf7vihglm0c5bwsxbl4x7f641289cji5s7jwy2dbsqk7g" }, "stable": { "version": [ - 4, + 5, 0, - 1 + 0 ], - "deps": [ - "memoize" - ], - "commit": "d363bb3e73909be013fcf35e1458bb654ec5bbaa", - "sha256": "0yh7gnv9xfqn8q4rzaa6wpyn9575vyfxy7d3afly2mqsb367fgm5" + "commit": "facbde4a7be292bf9490932cbe403b443273f45d", + "sha256": "0lwgvgnqf7vihglm0c5bwsxbl4x7f641289cji5s7jwy2dbsqk7g" } }, { @@ -2504,8 +2550,21 @@ "repo": "seagle0128/all-the-icons-ivy-rich", "unstable": { "version": [ - 20210505, - 840 + 20210605, + 1700 + ], + "deps": [ + "all-the-icons", + "ivy-rich" + ], + "commit": "e0eba9cb8f8c85c0b63434f6117f9fa232d8a890", + "sha256": "05a53s7v1vy688gwnn01p3flqlhznp2m0k1mg8ax4hjygyc05l8q" + }, + "stable": { + "version": [ + 1, + 5, + 1 ], "deps": [ "all-the-icons", @@ -2513,19 +2572,6 @@ ], "commit": "0138c7e7f3b7a6c09665e45a6dd2168359efd47c", "sha256": "0nbbkasbklxf62rx9mc5w37r014vdbbg3vm5dy03hxzvq3y1yrpn" - 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20210518, - 1738 + 20210530, + 1418 ], - "commit": "7e9b8d930b22900030f76b1e109ce64eb275b793", - "sha256": "06qimv5pxyz6rqz7v5fjkji3ay2cxs7h9bqf2y2jxpy6zsdy851m" + "commit": "a56c56de048900409d271f91fd08a408fd9bf32e", + "sha256": "0nblkcz52qvfkf4q3yb7drv0rbpkqgzv3clwb6vkvwz13s29b6my" } }, { @@ -109085,11 +109614,11 @@ "repo": "justbur/emacs-which-key", "unstable": { "version": [ - 20210407, - 28 + 20210601, + 252 ], - "commit": "5fb30301cb3b4fca5a0e1ce8ec1ef59290b79199", - "sha256": "1wgygby4zwlbx6ry6asraaixl169qdz092zgk1brvg63w7f8vkkb" + "commit": "fc29864395fdaf688e2ef5111831663bad89a020", + "sha256": "1adv32z8dmpygbrk14l1pj2535c10ncv8znfzgi1s908ds20kad1" }, "stable": { "version": [ @@ -109418,15 +109947,15 @@ "repo": "progfolio/wikinforg", "unstable": { "version": [ - 20210126, - 405 + 20210602, + 1459 ], "deps": [ "org", "wikinfo" ], - "commit": "2eb31ab00e4c8ad53dc15234f29527b9f0f54d71", - "sha256": "0sghvnvbbv3d7kdvcv2dbbzbv38b3jjzbrhjv6fn5lynyr929vqr" + "commit": "3aecd23e68b9117a03c65fafa85a0805b58609d1", + "sha256": "0m1fj06x9r941k2842v2091xbff89wp704ifrcdgb6zbksx5d8i2" } }, { @@ -109837,23 +110366,20 @@ "repo": "magit/with-editor", "unstable": { "version": [ - 20210427, - 1244 + 20210524, + 1654 ], - "commit": "86bdff68a106bc9d383fdab3bbf1ad4b703a52f0", - "sha256": "1rk8vza2g8gxybhjk10xj3pw9whc80cs9qv4avyv926g7dw60as9" + "commit": "5519b6a67ecd66865b4fdd5447425eee900c54f4", + "sha256": "1bmvkrfnjzrf0ch2mh75cv784mzs64i4f44l91xysapjqv46lfqn" }, "stable": { "version": [ 3, 0, - 2 + 4 ], - "deps": [ - "async" - ], - "commit": "6735180e73e787b79535c245b162249b70dbf841", - "sha256": "0hw6i5r3adkm4988badi94825lywkrh3sddiff4z04kj1nj15d0k" + "commit": "5519b6a67ecd66865b4fdd5447425eee900c54f4", + "sha256": "1bmvkrfnjzrf0ch2mh75cv784mzs64i4f44l91xysapjqv46lfqn" } }, { @@ -109943,23 +110469,19 @@ "repo": "DarwinAwardWinner/with-simulated-input", "unstable": { "version": [ - 20210514, - 349 + 20210527, + 2320 ], - "commit": "c377a673c86cdedd5d48418caf8f1ce621aca767", - "sha256": "10ms0cqxvicjs9lsbiy8h0hphx2dikr6bf1npybqwi7g643f2jzk" + "commit": "0f43fe46d4ab098c18a90b9df18cb96bab8e4a35", + "sha256": "0im6a1nr75mgz13zjavwycd5zsm5ysz5flbsmka7i8bkn2js1fm1" }, "stable": { "version": [ - 2, - 4 + 3, + 0 ], - "deps": [ - "s", - "seq" - ], - "commit": "3d881793521c5618cdb0968a85879e0e49da7fca", - "sha256": "12d3mhvzj74qwc4rdcb236jbqnf5lam8pk78j92kwbwjk1jaz2cf" + "commit": "ee4d2b75fd99bac3de40675b0a0e03529718f59f", + "sha256": "0n8h84whsh0aph8xhn9plprix9f6bysgvarz2anz7kwns19js6s4" } }, { @@ -111438,20 +111960,20 @@ "repo": "zkry/yaml.el", "unstable": { "version": [ - 20210424, - 2033 + 20210604, + 1500 ], - "commit": "d0abc17e3ddf42624d87fa6d2d3e1ba1dd175035", - "sha256": "19937d26gvj5ir1absb8rxyv35ac85xwvgb0nqcldmnqxqa2h66p" + "commit": "5b352258f50ec9d2e7ff8bd16323a24fb484b52b", + "sha256": "1zaj7w0jfzz7iwsnd8ql3pxgiw108dx0ggk2q5rqxdz5902hksqs" }, "stable": { "version": [ 0, - 2, - 1 + 3, + 2 ], - "commit": "d8ac09e8cad7f67339e19c53e77da1cd0ff98d36", - "sha256": "0wkrvhb5yhb38sf7w1njxij1x0pfxp56hn97j2bk4w58dz94fxir" + "commit": "5b352258f50ec9d2e7ff8bd16323a24fb484b52b", + "sha256": "1zaj7w0jfzz7iwsnd8ql3pxgiw108dx0ggk2q5rqxdz5902hksqs" } }, { @@ -111462,26 +111984,26 @@ "repo": "knu/yaml-imenu.el", "unstable": { "version": [ - 20201023, - 1524 + 20210530, + 251 ], "deps": [ "yaml-mode" ], - "commit": "fa37d9bf8a09af144980a42cc22891b1555a12ae", - "sha256": "08v2wxdcp5f43vl8976bn3lsiqkaph4driczgc0bw9p495fljb2p" + "commit": "01741205fb33d2ed511502d1cd65a711e07a3117", + "sha256": "1z8yzi322y8wnvci77xp7fb7x5l3z8zy1ng4zaa1z856va8x2971" }, "stable": { "version": [ 1, 0, - 2 + 3 ], "deps": [ "yaml-mode" ], - "commit": "fa37d9bf8a09af144980a42cc22891b1555a12ae", - "sha256": "08v2wxdcp5f43vl8976bn3lsiqkaph4driczgc0bw9p495fljb2p" + "commit": "01741205fb33d2ed511502d1cd65a711e07a3117", + "sha256": "1z8yzi322y8wnvci77xp7fb7x5l3z8zy1ng4zaa1z856va8x2971" } }, { @@ -112467,15 +112989,15 @@ "repo": "EFLS/zetteldeft", "unstable": { "version": [ - 20210520, - 724 + 20210602, + 841 ], "deps": [ "ace-window", "deft" ], - "commit": "bf46e764ed799d08e27c84e2c79cc643cab61322", - "sha256": "0x930i82090nfypm2qm60fx50y2ixv2b9szzz1ab07bb42ikpic2" + "commit": "b71f24d382887aeefde9c47fb6aa521d0ebeb806", + "sha256": "09wy2gllacry2n0cp52fakaa36lnd1mnbb26zysdjxh0429siy4a" }, "stable": { "version": [ @@ -112529,11 +113051,11 @@ "repo": "ziglang/zig-mode", "unstable": { "version": [ - 20210412, - 1428 + 20210605, + 513 ], - "commit": "2d0eb23e6b5c12b946f12c23803157605c90f02f", - "sha256": "0lpsqclk37nx8i9jfskbnvxrhvh6vaflgh63xijhv9ajx2iwpw0r" + "commit": "0babe7ec524f59d57c01e2fc66294d1afa01f5eb", + "sha256": "0balv7ggz10izjw7r6z9vx17qq88229jdzpsjas6z37gk61bfngk" } }, { @@ -112991,6 +113513,24 @@ "sha256": "1nn6dvzcayh6nv6xn3siv09iixc5c3gy9c8y1fdwzq81yny9l2fr" } }, + { + "ename": "zprint-format", + "commit": "54457e29def6ecfdf96f599e6a007f5ebee485b9", + "sha256": "1flb1i5byp6s8fj1vpgm5wc43f8hld7rg940m20a40ysr1x35szk", + "fetcher": "github", + "repo": "dpassen/zprint-format", + "unstable": { + "version": [ + 20210602, + 146 + ], + "deps": [ + "reformatter" + ], + "commit": "6051a5709ea6182974d7239f26e04c9731e04447", + "sha256": "1in5cyrj0kn1fdfcw7iaxhsxx5hn3r3r0aiida8p9dvkx8kq540l" + } + }, { "ename": "zprint-mode", "commit": "188d40daec1ff86dcfa807a91eb77a1281de3951", diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/tramp/default.nix b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/tramp/default.nix index 237c05c5fa..72dbf7a0f4 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/tramp/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/elisp-packages/tramp/default.nix @@ -1,16 +1,28 @@ -{ lib, stdenv, fetchurl, emacs, texinfo }: +{ lib +, stdenv +, fetchurl +, emacs +, texinfo +}: stdenv.mkDerivation rec { - name = "tramp-2.4.2"; + pname = "tramp"; + version = "2.5.0"; + src = fetchurl { - url = "mirror://gnu/tramp/${name}.tar.gz"; - sha256 = "082nwvi99y0bvpl1yhn4yjc8a613jh1pdck253lxn062lkcxxw61"; + url = "mirror://gnu/tramp/${pname}-${version}.tar.gz"; + sha256 = "sha256-w+6HJA8kFb75Z+7vM1zDnzOnkSSIXKnLVyCcEh+nMGY="; }; - buildInputs = [ emacs texinfo ]; + + buildInputs = [ + emacs + texinfo + ]; + meta = { - description = "Transparently access remote files from Emacs. Newer versions than built-in."; homepage = "https://www.gnu.org/software/tramp"; + description = "Transparently access remote files from Emacs. Newer versions than built-in."; license = lib.licenses.gpl3Plus; - platforms = lib.platforms.all; + inherit (emacs.meta) platforms; }; } diff --git a/third_party/nixpkgs/pkgs/applications/editors/emacs/generic.nix b/third_party/nixpkgs/pkgs/applications/editors/emacs/generic.nix index ad044d3968..bcd55258a4 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/emacs/generic.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/emacs/generic.nix @@ -9,8 +9,8 @@ { stdenv, lib, fetchurl, fetchpatch, ncurses, xlibsWrapper, libXaw, libXpm , Xaw3d, libXcursor, pkg-config, gettext, libXft, dbus, libpng, libjpeg, giflib , libtiff, librsvg, gconf, libxml2, imagemagick, gnutls, libselinux -, alsaLib, cairo, acl, gpm, AppKit, GSS, ImageIO, m17n_lib, libotf -, jansson, harfbuzz +, alsa-lib, cairo, acl, gpm, AppKit, GSS, ImageIO, m17n_lib, libotf +, sigtool, jansson, harfbuzz , dontRecurseIntoAttrs ,emacsPackagesFor , libgccjit, targetPlatform, makeWrapper # native-comp params , systemd ? null @@ -46,10 +46,10 @@ assert withXwidgets -> withGTK3 && webkitgtk != null; let emacs = stdenv.mkDerivation (lib.optionalAttrs nativeComp { NATIVE_FULL_AOT = "1"; LIBRARY_PATH = "${lib.getLib stdenv.cc.libc}/lib"; -} // lib.optionalAttrs stdenv.isDarwin { - CFLAGS = "-DMAC_OS_X_VERSION_MAX_ALLOWED=101200"; } // { - inherit pname version patches; + inherit pname version; + + patches = patches fetchpatch; src = fetchurl { url = "mirror://gnu/emacs/${name}.tar.xz"; @@ -105,7 +105,7 @@ let emacs = stdenv.mkDerivation (lib.optionalAttrs nativeComp { ++ lib.optional (withX && (withGTK3 || withXwidgets)) wrapGAppsHook; buildInputs = - [ ncurses gconf libxml2 gnutls alsaLib acl gpm gettext jansson harfbuzz.dev ] + [ ncurses gconf libxml2 gnutls alsa-lib acl gpm gettext jansson harfbuzz.dev ] ++ lib.optionals stdenv.isLinux [ dbus libselinux systemd ] ++ lib.optionals withX [ xlibsWrapper libXaw Xaw3d libXpm libpng libjpeg giflib libtiff libXft @@ -118,8 +118,8 @@ let emacs = stdenv.mkDerivation (lib.optionalAttrs nativeComp { ++ lib.optional (withX && withMotif) motif ++ lib.optionals (withX && withXwidgets) [ webkitgtk glib-networking ] ++ lib.optionals withNS [ AppKit GSS ImageIO ] - ++ lib.optionals nativeComp [ libgccjit ] - ; + ++ lib.optionals stdenv.isDarwin [ sigtool ] + ++ lib.optionals nativeComp [ libgccjit ]; hardeningDisable = [ "format" ]; @@ -138,7 +138,7 @@ let emacs = stdenv.mkDerivation (lib.optionalAttrs nativeComp { ++ lib.optional withXwidgets "--with-xwidgets" ++ lib.optional nativeComp "--with-native-compilation" ++ lib.optional withImageMagick "--with-imagemagick" - ; + ; installTargets = [ "tags" "install" ]; diff --git a/third_party/nixpkgs/pkgs/applications/editors/ghostwriter/default.nix b/third_party/nixpkgs/pkgs/applications/editors/ghostwriter/default.nix index d23b42811b..fdada2e776 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/ghostwriter/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/ghostwriter/default.nix @@ -1,20 +1,36 @@ -{ lib, stdenv, mkDerivation, fetchFromGitHub, qmake, pkg-config, qttools, qtwebengine, hunspell }: +{ lib +, stdenv +, mkDerivation +, fetchFromGitHub +, qmake +, pkg-config +, qttools +, qtwebengine +, hunspell +, cmark +, multimarkdown +, pandoc +}: mkDerivation rec { pname = "ghostwriter"; - version = "2.0.1"; + version = "2.0.2"; src = fetchFromGitHub { owner = "wereturtle"; repo = pname; rev = version; - sha256 = "sha256-bNVhYwX60F3lrP9UmZSntfz83vbmHe9tu/4nUgzUWR4="; + sha256 = "sha256-kNt0IIAcblDJ81ENIkoJuJvrI+F+fdVgWUJ6g1YpjqU="; }; nativeBuildInputs = [ qmake pkg-config qttools ]; buildInputs = [ qtwebengine hunspell ]; + qtWrapperArgs = [ + "--prefix" "PATH" ":" (lib.makeBinPath [ cmark multimarkdown pandoc ]) + ]; + meta = with lib; { description = "A cross-platform, aesthetic, distraction-free Markdown editor"; homepage = src.meta.homepage; diff --git a/third_party/nixpkgs/pkgs/applications/editors/gophernotes/default.nix b/third_party/nixpkgs/pkgs/applications/editors/gophernotes/default.nix index 468b3ff038..fe694c1add 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/gophernotes/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/gophernotes/default.nix @@ -5,16 +5,16 @@ buildGoModule rec { pname = "gophernotes"; - version = "0.7.2"; + version = "0.7.3"; src = fetchFromGitHub { owner = "gopherdata"; repo = "gophernotes"; rev = "v${version}"; - sha256 = "sha256-EEMKV+k5qcep4z7J5r1nSLxmb0fbfpJOPmz5bE91cd8="; + sha256 = "sha256-LiYPos6Ic+se5bTTkvggmyxyS20uhgALkDU2LoXTci8="; }; - vendorSha256 = "sha256-Wy4HcPlrlYUjRQHhw+UPAa+Rn1FvJobWGxgFiJKJTAg="; + vendorSha256 = "sha256-wDMx3B47Vv87/3YEPX8/70Q5/REJ7IPvw8dA/viJiSY="; meta = with lib; { description = "Go kernel for Jupyter notebooks"; diff --git a/third_party/nixpkgs/pkgs/applications/editors/jetbrains/common.nix b/third_party/nixpkgs/pkgs/applications/editors/jetbrains/common.nix index 635a8dbf46..dcbaa13679 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/jetbrains/common.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/jetbrains/common.nix @@ -3,13 +3,13 @@ , vmopts ? null }: -{ name, product, version, src, wmClass, jdk, meta, extraLdPath ? [] }: +{ name, product, version, src, wmClass, jdk, meta, extraLdPath ? [] }@args: with lib; let loName = toLower product; hiName = toUpper product; - execName = concatStringsSep "-" (init (splitString "-" name)); + mainProgram = concatStringsSep "-" (init (splitString "-" name)); vmoptsName = loName + ( if (with stdenv.hostPlatform; (is32bit || isDarwin)) then "" @@ -18,15 +18,17 @@ let loName = toLower product; in with stdenv; lib.makeOverridable mkDerivation rec { - inherit name src meta; + inherit name src; + meta = args.meta // { inherit mainProgram; }; + desktopItem = makeDesktopItem { - name = execName; - exec = execName; + name = mainProgram; + exec = mainProgram; comment = lib.replaceChars ["\n"] [" "] meta.longDescription; desktopName = product; genericName = meta.description; categories = "Development;"; - icon = execName; + icon = mainProgram; extraEntries = '' StartupWMClass=${wmClass} ''; @@ -64,13 +66,13 @@ with stdenv; lib.makeOverridable mkDerivation rec { installPhase = '' mkdir -p $out/{bin,$name,share/pixmaps,libexec/${name}} cp -a . $out/$name - ln -s $out/$name/bin/${loName}.png $out/share/pixmaps/${execName}.png + ln -s $out/$name/bin/${loName}.png $out/share/pixmaps/${mainProgram}.png mv bin/fsnotifier* $out/libexec/${name}/. jdk=${jdk.home} item=${desktopItem} - makeWrapper "$out/$name/bin/${loName}.sh" "$out/bin/${execName}" \ + makeWrapper "$out/$name/bin/${loName}.sh" "$out/bin/${mainProgram}" \ --prefix PATH : "$out/libexec/${name}:${lib.optionalString (stdenv.isDarwin) "${jdk}/jdk/Contents/Home/bin:"}${lib.makeBinPath [ jdk coreutils gnugrep which git ]}" \ --prefix LD_LIBRARY_PATH : "${lib.makeLibraryPath ([ # Some internals want libstdc++.so.6 diff --git a/third_party/nixpkgs/pkgs/applications/editors/jetbrains/default.nix b/third_party/nixpkgs/pkgs/applications/editors/jetbrains/default.nix index e72d2df43a..38ea3054a6 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/jetbrains/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/jetbrains/default.nix @@ -307,12 +307,12 @@ in mps = buildMps rec { name = "mps-${version}"; - version = "2020.3.3"; /* updated by script */ + version = "2021.1"; /* updated by script */ description = "Create your own domain-specific language"; license = lib.licenses.asl20; src = fetchurl { - url = "https://download.jetbrains.com/mps/2020.3/MPS-${version}.tar.gz"; - sha256 = "0sb50f7d4272dzx84njc326xvhbqn3xwrphvdq4zl3pk3wl8f4nz"; /* updated by script */ + url = "https://download.jetbrains.com/mps/${version}/MPS-${version}.tar.gz"; + sha256 = "0fdh8lzsi2zryi0xs961vrf3l8kqk5imlj56dhifywi7xkhs3vwn"; /* updated by script */ }; wmClass = "jetbrains-mps"; update-channel = "MPS RELEASE"; @@ -320,12 +320,12 @@ in phpstorm = buildPhpStorm rec { name = "phpstorm-${version}"; - version = "2021.1.2"; /* updated by script */ + version = "2021.1.3"; /* updated by script */ description = "Professional IDE for Web and PHP developers"; license = lib.licenses.unfree; src = fetchurl { url = "https://download.jetbrains.com/webide/PhpStorm-${version}.tar.gz"; - sha256 = "02s75fqd9hfh302zha4jw6qynpgm9nkrlq7s78nk3fc3d3hw8v5y"; /* updated by script */ + sha256 = "05hjv1nz1b82bkakadjvsy23v0qv8fyni6h31lcg9198h1890f7v"; /* updated by script */ }; wmClass = "jetbrains-phpstorm"; update-channel = "PhpStorm RELEASE"; @@ -333,12 +333,12 @@ in pycharm-community = buildPycharm rec { name = "pycharm-community-${version}"; - version = "2021.1.1"; /* updated by script */ + version = "2021.1.2"; /* updated by script */ description = "PyCharm Community Edition"; license = lib.licenses.asl20; src = fetchurl { url = "https://download.jetbrains.com/python/${name}.tar.gz"; - sha256 = "04bs9sz872b0h1zzax23irvj6q5wxnzp6fl4f177j94kh4116cqh"; /* updated by script */ + sha256 = "0sp7w1xrl0y36dai08kqfd0jk06yr7jdbaf1a9f3fgxp5pmspxp1"; /* updated by script */ }; wmClass = "jetbrains-pycharm-ce"; update-channel = "PyCharm RELEASE"; @@ -346,12 +346,12 @@ in pycharm-professional = buildPycharm rec { name = "pycharm-professional-${version}"; - version = "2021.1.1"; /* updated by script */ + version = "2021.1.2"; /* updated by script */ description = "PyCharm Professional Edition"; license = lib.licenses.unfree; src = fetchurl { url = "https://download.jetbrains.com/python/${name}.tar.gz"; - sha256 = "0wc9j7nilakmm7scf7a71zb3k9vixgih05ni3n3pp4iznvwb3nxg"; /* updated by script */ + sha256 = "0ny7rbl8g5azpqnlcq8l6bwh6hrp8rgp06lf4a8gdr9rpvw9xsqb"; /* updated by script */ }; wmClass = "jetbrains-pycharm"; update-channel = "PyCharm RELEASE"; @@ -372,12 +372,12 @@ in ruby-mine = buildRubyMine rec { name = "ruby-mine-${version}"; - version = "2021.1.1"; /* updated by script */ + version = "2021.1.2"; /* updated by script */ description = "The Most Intelligent Ruby and Rails IDE"; license = lib.licenses.unfree; src = fetchurl { url = "https://download.jetbrains.com/ruby/RubyMine-${version}.tar.gz"; - sha256 = "05sfjf5523idsl7byc7400r4xqv1d65gpmkh5x0lbgf1k3bx2wlm"; /* updated by script */ + sha256 = "0r80y8y38rdxgc9sim0q2p7bmgxlp4pdxydr0w9gjikwnjxnvz51"; /* updated by script */ }; wmClass = "jetbrains-rubymine"; update-channel = "RubyMine RELEASE"; diff --git a/third_party/nixpkgs/pkgs/applications/editors/jetbrains/update.pl b/third_party/nixpkgs/pkgs/applications/editors/jetbrains/update.pl index 6f0a451849..cd3d2193a2 100755 --- a/third_party/nixpkgs/pkgs/applications/editors/jetbrains/update.pl +++ b/third_party/nixpkgs/pkgs/applications/editors/jetbrains/update.pl @@ -61,8 +61,9 @@ sub update_nix_block { # try to interpret some nix my ($name) = $block =~ /name\s*=\s*"([^"]+)"/; $name =~ s/\$\{version\}/$latest_versions{$channel}/; - $url =~ s/\$\{name\}/$name/; - $url =~ s/\$\{version\}/$latest_versions{$channel}/; + # Some url paattern contain variables more than once + $url =~ s/\$\{name\}/$name/g; + $url =~ s/\$\{version\}/$latest_versions{$channel}/g; die "$url still has some interpolation" if $url =~ /\$/; my ($sha256) = get("$url.sha256") =~ /^([0-9a-f]{64})/; my $version_string = $latest_versions{$channel}; diff --git a/third_party/nixpkgs/pkgs/applications/editors/jupyter-kernels/octave/default.nix b/third_party/nixpkgs/pkgs/applications/editors/jupyter-kernels/octave/default.nix new file mode 100644 index 0000000000..9db38d1444 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/editors/jupyter-kernels/octave/default.nix @@ -0,0 +1,60 @@ +{ lib +, stdenv +, callPackage +, runCommand +, makeWrapper +, octave +, imagemagick +, python3 +}: + +# To test: +# $(nix-build -E 'with import {}; jupyter.override { definitions = { octave = octave-kernel.definition; }; }')/bin/jupyter-notebook + +let + kernel = callPackage ./kernel.nix { + python3Packages = python3.pkgs; + }; + +in + +rec { + launcher = runCommand "octave-kernel-launcher" { + inherit octave; + python = python3.withPackages (ps: [ ps.traitlets ps.jupyter_core ps.ipykernel ps.metakernel kernel ]); + buildInputs = [ makeWrapper ]; + } '' + mkdir -p $out/bin + + makeWrapper $python/bin/python $out/bin/octave-kernel \ + --add-flags "-m octave_kernel" \ + --suffix PATH : $octave/bin + ''; + + sizedLogo = size: stdenv.mkDerivation { + name = ''octave-logo-${octave.version}-${size}x${size}.png''; + + src = octave.src; + + buildInputs = [ imagemagick ]; + + dontConfigure = true; + dontInstall = true; + + buildPhase = '' + convert ./libgui/src/icons/logo.png -resize ${size}x${size} $out + ''; + }; + + definition = { + displayName = "Octave"; + argv = [ + "${launcher}/bin/octave-kernel" + "-f" + "{connection_file}" + ]; + language = "octave"; + logo32 = sizedLogo "32"; + logo64 = sizedLogo "64"; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/editors/jupyter-kernels/octave/kernel.nix b/third_party/nixpkgs/pkgs/applications/editors/jupyter-kernels/octave/kernel.nix new file mode 100644 index 0000000000..9ebb425778 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/editors/jupyter-kernels/octave/kernel.nix @@ -0,0 +1,30 @@ +{ lib, octave, python3Packages }: + +with python3Packages; + +buildPythonPackage rec { + pname = "octave-kernel"; + version = "0.32.0"; + + src = fetchPypi { + pname = "octave_kernel"; + inherit version; + sha256 = "0dfbxfcf3bz4jswnpkibnjwlkgy0y4j563nrhaqxv3nfa65bksif"; + }; + + propagatedBuildInputs = [ metakernel ipykernel ]; + + # Tests require jupyter_kernel_test to run, but it hasn't seen a + # release since 2017 and seems slightly abandoned. + # Doing fetchPypi on it doesn't work, even though it exists here: + # https://pypi.org/project/jupyter_kernel_test/. + doCheck = false; + + meta = with lib; { + description = "A Jupyter kernel for Octave."; + homepage = "https://github.com/Calysto/octave_kernel"; + license = licenses.bsd3; + maintainers = with maintainers; [ thomasjm ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/editors/kodestudio/default.nix b/third_party/nixpkgs/pkgs/applications/editors/kodestudio/default.nix index aa7b7b1944..38fb55ecf7 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/kodestudio/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/kodestudio/default.nix @@ -1,6 +1,6 @@ { stdenv, lib, fetchurl, makeDesktopItem, makeWrapper , # Patchelf dependencies: - alsaLib, atomEnv, boehmgc, flac, libogg, libvorbis, libXScrnSaver, libGLU, libGL + alsa-lib, atomEnv, boehmgc, flac, libogg, libvorbis, libXScrnSaver, libGLU, libGL , openssl, xorg, zlib }: @@ -57,7 +57,7 @@ in $out/kodestudio patchelf \ --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ - --set-rpath ".:${stdenv.cc.libc}/lib:${xorg.libXinerama}/lib:${xorg.libX11}/lib:${alsaLib}/lib:${libGL}/lib:${libGLU}/lib:${openssl.out}/lib" \ + --set-rpath ".:${stdenv.cc.libc}/lib:${xorg.libXinerama}/lib:${xorg.libX11}/lib:${alsa-lib}/lib:${libGL}/lib:${libGLU}/lib:${openssl.out}/lib" \ $out/resources/app/extensions/krom/Krom/linux/Krom patchelf \ --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ diff --git a/third_party/nixpkgs/pkgs/applications/editors/lighttable/default.nix b/third_party/nixpkgs/pkgs/applications/editors/lighttable/default.nix index 52acc8ee50..b19b1ac2b6 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/lighttable/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/lighttable/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchurl, zlib, glib, alsaLib, makeDesktopItem +{ stdenv, lib, fetchurl, zlib, glib, alsa-lib, makeDesktopItem , dbus, gtk2, atk, pango, freetype, fontconfig, libgnome-keyring3, gdk-pixbuf , cairo, cups, expat, libgpgerror, nspr, gnome2, nss, xorg, systemd, libnotify }: @@ -6,7 +6,7 @@ let libPath = lib.makeLibraryPath [ stdenv.cc.cc zlib glib dbus gtk2 atk pango freetype libgnome-keyring3 nss - fontconfig gdk-pixbuf cairo cups expat libgpgerror alsaLib nspr gnome2.GConf + fontconfig gdk-pixbuf cairo cups expat libgpgerror alsa-lib nspr gnome2.GConf xorg.libXrender xorg.libX11 xorg.libXext xorg.libXdamage xorg.libXtst xorg.libXcomposite xorg.libXi xorg.libXfixes libnotify xorg.libXrandr xorg.libXcursor diff --git a/third_party/nixpkgs/pkgs/applications/editors/mg/default.nix b/third_party/nixpkgs/pkgs/applications/editors/mg/default.nix index ea5e162fdd..bd7774b505 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/mg/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/mg/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "mg"; - version = "6.8.1"; + version = "6.9"; src = fetchFromGitHub { owner = "ibara"; repo = "mg"; - rev = "mg-6.8.1"; - sha256 = "0fyqyi5sag13jx8bc22bvkgybddvsr0wdili9ikxnpnqg2w84fx7"; + rev = "mg-${version}"; + sha256 = "1w49yb9v1657rv1w5w7rc9ih1d2vzv6ym3mzhf2wgmh04pdm6hid"; }; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/applications/editors/mindforger/default.nix b/third_party/nixpkgs/pkgs/applications/editors/mindforger/default.nix index 512e0f1244..6b93153ec0 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/mindforger/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/mindforger/default.nix @@ -1,14 +1,16 @@ -{ mkDerivation +{ lib +, stdenv , cmark-gfm , fetchurl +, fetchpatch , qmake , qtbase -, qtwebkit -, lib +, qtwebengine , wrapGAppsHook +, wrapQtAppsHook }: -mkDerivation rec { +stdenv.mkDerivation rec { pname = "mindforger"; version = "1.52.0"; @@ -17,19 +19,41 @@ mkDerivation rec { sha256 = "1pghsw8kwvjhg3jpmjs0n892h2l0pm0cs6ymi8b23fwk0kfj67rd"; }; - nativeBuildInputs = [ qmake wrapGAppsHook ] ; - buildInputs = [ qtbase qtwebkit cmark-gfm ] ; + nativeBuildInputs = [ qmake wrapGAppsHook wrapQtAppsHook ]; + buildInputs = [ qtbase qtwebengine cmark-gfm ]; doCheck = true; - patches = [ ./build.patch ] ; + patches = [ + # this makes the package relocatable - removes hardcoded references to /usr + ./paths.patch + # this fixes compilation with QtWebEngine - referencing a commit trying to upstream the change - see https://github.com/dvorka/mindforger/pull/1357 + (fetchpatch { + url = "https://github.com/dvorka/mindforger/commit/d28e2bade0278af1b5249953202810540969026a.diff"; + sha256 = "sha256-qHKQQNGSc3F9seaOHV0gzBQFFqcTXk91LpKrojjpAUw="; + }) + ]; postPatch = '' substituteInPlace lib/src/install/installer.cpp --replace /usr "$out" substituteInPlace app/resources/gnome-shell/mindforger.desktop --replace /usr "$out" + for f in app/app.pro lib/lib.pro; do + substituteInPlace "$f" --replace "QMAKE_CXX = g++" "" + done ''; - qmakeFlags = [ "-r mindforger.pro" "CONFIG+=mfnoccache" ] ; + qmakeFlags = [ + "-r" + "mindforger.pro" + "CONFIG+=mfnoccache" + "CONFIG+=mfwebengine" + ]; + + postInstall = lib.optionalString stdenv.isDarwin '' + mkdir "$out"/Applications + mv app/mindforger.app "$out"/Applications/ + wrapQtApp "$out"/Applications/mindforger.app/Contents/MacOS/mindforger + ''; meta = with lib; { description = "Thinking Notebook & Markdown IDE"; diff --git a/third_party/nixpkgs/pkgs/applications/editors/mindforger/build.patch b/third_party/nixpkgs/pkgs/applications/editors/mindforger/paths.patch similarity index 100% rename from third_party/nixpkgs/pkgs/applications/editors/mindforger/build.patch rename to third_party/nixpkgs/pkgs/applications/editors/mindforger/paths.patch diff --git a/third_party/nixpkgs/pkgs/applications/editors/music/tuxguitar/default.nix b/third_party/nixpkgs/pkgs/applications/editors/music/tuxguitar/default.nix index 90879b352e..a48b5eae3d 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/music/tuxguitar/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/music/tuxguitar/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, swt, jdk, makeWrapper, alsaLib, jack2, fluidsynth, libpulseaudio }: +{ lib, stdenv, fetchurl, swt, jdk, makeWrapper, alsa-lib, jack2, fluidsynth, libpulseaudio }: let metadata = assert stdenv.hostPlatform.system == "i686-linux" || stdenv.hostPlatform.system == "x86_64-linux"; if stdenv.hostPlatform.system == "i686-linux" then @@ -27,7 +27,7 @@ in stdenv.mkDerivation rec { wrapProgram $out/bin/tuxguitar \ --set JAVA "${jdk}/bin/java" \ - --prefix LD_LIBRARY_PATH : "$out/lib/:${lib.makeLibraryPath [ swt alsaLib jack2 fluidsynth libpulseaudio ]}" \ + --prefix LD_LIBRARY_PATH : "$out/lib/:${lib.makeLibraryPath [ swt alsa-lib jack2 fluidsynth libpulseaudio ]}" \ --prefix CLASSPATH : "${swt}/jars/swt.jar:$out/lib/tuxguitar.jar:$out/lib/itext.jar" ''; diff --git a/third_party/nixpkgs/pkgs/applications/editors/nano/default.nix b/third_party/nixpkgs/pkgs/applications/editors/nano/default.nix index 1a92ca3dec..bd61933b38 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/nano/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/nano/default.nix @@ -16,11 +16,11 @@ let in stdenv.mkDerivation rec { pname = "nano"; - version = "5.7"; + version = "5.8"; src = fetchurl { url = "mirror://gnu/nano/${pname}-${version}.tar.xz"; - sha256 = "1ynarilx0ca0a5h6hl5bf276cymyy8s9wr5l24vyy7f15v683cfl"; + sha256 = "133nhxg4xfxisjzi85rn2l575hdbvcax1s13l4m6wcvq5zdn6fz4"; }; nativeBuildInputs = [ texinfo ] ++ optional enableNls gettext; diff --git a/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/Cargo.lock b/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/Cargo.lock deleted file mode 100644 index 4e37d0fbfa..0000000000 --- a/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/Cargo.lock +++ /dev/null @@ -1,3292 +0,0 @@ -# This file is automatically @generated by Cargo. -# It is not intended for manual editing. -version = 3 - 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"winapi 0.3.9", -] - -[[package]] -name = "ws2_32-sys" -version = "0.2.1" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "d59cefebd0c892fa2dd6de581e937301d8552cb44489cdff035c6187cb63fa5e" -dependencies = [ - "winapi 0.2.8", - "winapi-build", -] - -[[package]] -name = "x11-dl" -version = "2.18.5" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "2bf981e3a5b3301209754218f962052d4d9ee97e478f4d26d4a6eced34c1fef8" -dependencies = [ - "lazy_static", - "libc", - "maybe-uninit", - "pkg-config", -] - -[[package]] -name = "xattr" -version = "0.2.2" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "244c3741f4240ef46274860397c7c74e50eb23624996930e484c16679633a54c" -dependencies = [ - "libc", -] - -[[package]] -name = "xcursor" -version = "0.3.3" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "3a9a231574ae78801646617cefd13bfe94be907c0e4fa979cfd8b770aa3c5d08" -dependencies = [ - "nom 6.1.2", -] - -[[package]] -name = "xdg" -version = "2.2.0" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "d089681aa106a86fade1b0128fb5daf07d5867a509ab036d99988dec80429a57" - -[[package]] -name = "xml-rs" -version = "0.8.3" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "b07db065a5cf61a7e4ba64f29e67db906fb1787316516c4e6e5ff0fea1efcd8a" diff --git a/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/default.nix b/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/default.nix index c0a5448732..55f75777be 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/default.nix @@ -9,65 +9,59 @@ , expat , openssl , SDL2 -, vulkan-loader , fontconfig , ninja , gn , llvmPackages , makeFontsConf +, libglvnd +, libxkbcommon +, wayland +, xorg }: rustPlatform.buildRustPackage rec { pname = "neovide"; - version = "20210515"; + version = "unstable-2021-06-21"; - src = - let - repo = fetchFromGitHub { - owner = "Kethku"; - repo = "neovide"; - rev = "0b976c3d28bbd24e6c83a2efc077aa96dde1e9eb"; - sha256 = "sha256-asaOxcAenKdy/yJvch3HFfgnrBnQagL02UpWYnz7sa8="; - }; - in - runCommand "source" { } '' - cp -R ${repo} $out - chmod -R +w $out - # Reasons for patching Cargo.toml: - # - I got neovide built with latest compatible skia-save version 0.35.1 - # and I did not try to get it with 0.32.1 working. Changing the skia - # version is time consuming, because of manual dependecy tracking and - # long compilation runs. - sed -i $out/Cargo.toml \ - -e '/skia-safe/s;0.32.1;0.35.1;' - cp ${./Cargo.lock} $out/Cargo.lock - ''; + src = fetchFromGitHub { + owner = "Kethku"; + repo = "neovide"; + rev = "4159c47ff4f30073b92b9d63fc6ab70e07b74b6d"; + sha256 = "sha256-XwirJGXMGxc/NkpSeHBUc16ppvJ+H4ECnrOVu030Qfg="; + }; - cargoSha256 = "sha256-XMPRM3BAfCleS0LXQv03A3lQhlUhAP8/9PdVbAUnfG0="; + cargoSha256 = "sha256-WCk9kt81DtBwpEEdKH9gKQSVxAvH+vkyP2y24tU+vzY="; - SKIA_OFFLINE_SOURCE_DIR = + SKIA_SOURCE_DIR = let repo = fetchFromGitHub { owner = "rust-skia"; repo = "skia"; - # see rust-skia/Cargo.toml#package.metadata skia - rev = "m86-0.35.0"; - sha256 = "sha256-uTSgtiEkbE9e08zYOkRZyiHkwOLr/FbBYkr2d+NZ8J0="; + # see rust-skia:skia-bindings/Cargo.toml#package.metadata skia + rev = "m90-0.38.3"; + sha256 = "sha256-l8c4vfO1PELAT8bDyr/yQGZetZsaufAlJ6bBOXz7E1w="; }; # The externals for skia are taken from skia/DEPS externals = lib.mapAttrs (n: v: fetchgit v) (lib.importJSON ./skia-externals.json); in - runCommand "source" { } ('' - cp -R ${repo} $out - chmod -R +w $out + runCommand "source" {} ( + '' + cp -R ${repo} $out + chmod -R +w $out - mkdir -p $out/third_party/externals - cd $out/third_party/externals - '' + (builtins.concatStringsSep "\n" (lib.mapAttrsToList (name: value: "cp -ra ${value} ${name}") externals))); + mkdir -p $out/third_party/externals + cd $out/third_party/externals + '' + (builtins.concatStringsSep "\n" (lib.mapAttrsToList (name: value: "cp -ra ${value} ${name}") externals)) + ); - SKIA_OFFLINE_NINJA_COMMAND = "${ninja}/bin/ninja"; - SKIA_OFFLINE_GN_COMMAND = "${gn}/bin/gn"; + SKIA_NINJA_COMMAND = "${ninja}/bin/ninja"; + SKIA_GN_COMMAND = "${gn}/bin/gn"; LIBCLANG_PATH = "${llvmPackages.libclang.lib}/lib"; + preConfigure = '' + unset CC CXX + ''; + # test needs a valid fontconfig file FONTCONFIG_FILE = makeFontsConf { fontDirectories = [ ]; }; @@ -92,9 +86,9 @@ rustPlatform.buildRustPackage rec { ]; postFixup = '' - wrapProgram $out/bin/neovide \ - --prefix LD_LIBRARY_PATH : ${vulkan-loader}/lib - ''; + wrapProgram $out/bin/neovide \ + --prefix LD_LIBRARY_PATH : ${lib.makeLibraryPath [ libglvnd libxkbcommon wayland xorg.libXcursor xorg.libXext xorg.libXrandr xorg.libXi ]} + ''; postInstall = '' for n in 16x16 32x32 48x48 256x256; do diff --git a/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/skia-externals.json b/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/skia-externals.json index be1fdb181c..3c0de3008d 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/skia-externals.json +++ b/third_party/nixpkgs/pkgs/applications/editors/neovim/neovide/skia-externals.json @@ -16,8 +16,8 @@ }, "zlib": { "url": "https://chromium.googlesource.com/chromium/src/third_party/zlib", - "rev": "eaf99a4e2009b0e5759e6070ad1760ac1dd75461", - "sha256": "sha256-B4PgeSVBU/MSkPkXTu9jPIa37dNJPm2HpmiVf6XuOGE=" + "rev": "c876c8f87101c5a75f6014b0f832499afeb65b73", + "sha256": "sha256-mwozVo8ymyrYN4tw+/ZnSI+xogSTZQ6PUBba/jQqRkE=" }, "harfbuzz": { "url": "https://chromium.googlesource.com/external/github.com/harfbuzz/harfbuzz.git", @@ -31,7 +31,7 @@ }, "libgifcodec": { "url": "https://skia.googlesource.com/libgifcodec", - "rev": "d06d2a6d42baf6c0c91cacc28df2542a911d05fe", - "sha256": "sha256-ke1X5iyj2ah2NqGVdFv8GuoRAzXg1aCeTdZwUM8wvCI=" + "rev": "fd59fa92a0c86788dcdd84d091e1ce81eda06a77", + "sha256": "sha256-spyZU4QhV2xrHcBRoYqYgCR0wEM5lgfhGh8pqJE5yXM=" } } diff --git a/third_party/nixpkgs/pkgs/applications/editors/neovim/neovim-override.vim b/third_party/nixpkgs/pkgs/applications/editors/neovim/neovim-override.vim new file mode 100644 index 0000000000..34a1a8f1f4 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/editors/neovim/neovim-override.vim @@ -0,0 +1,7 @@ +" configuration generated by NIX +set nocompatible + +set packpath^=/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-vim-pack-dir +set runtimepath^=/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-vim-pack-dir + +:help ale diff --git a/third_party/nixpkgs/pkgs/applications/editors/neovim/tests.nix b/third_party/nixpkgs/pkgs/applications/editors/neovim/tests.nix new file mode 100644 index 0000000000..f9d0d659b7 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/editors/neovim/tests.nix @@ -0,0 +1,135 @@ +{ vimUtils, vim_configurable, writeText, neovim, vimPlugins +, lib, fetchFromGitHub, neovimUtils, wrapNeovimUnstable +, neovim-unwrapped +, fetchFromGitLab +, pkgs +}: +let + inherit (vimUtils) buildVimPluginFrom2Nix; + inherit (neovimUtils) makeNeovimConfig; + + packages.myVimPackage.start = with vimPlugins; [ vim-nix ]; + + plugins = with vimPlugins; [ + { + plugin = vim-obsession; + config = '' + map $ Obsession + ''; + } + ]; + + nvimConfNix = makeNeovimConfig { + inherit plugins; + customRC = '' + " just a comment + ''; + }; + + nvimAutoDisableWrap = makeNeovimConfig { }; + + nvimConfDontWrap = makeNeovimConfig { + inherit plugins; + customRC = '' + " just a comment + ''; + }; + + wrapNeovim2 = suffix: config: + wrapNeovimUnstable neovim-unwrapped (config // { + extraName = suffix; + }); + + nmt = fetchFromGitLab { + owner = "rycee"; + repo = "nmt"; + rev = "d2cc8c1042b1c2511f68f40e2790a8c0e29eeb42"; + sha256 = "1ykcvyx82nhdq167kbnpgwkgjib8ii7c92y3427v986n2s5lsskc"; + }; + + runTest = neovim-drv: buildCommand: + pkgs.runCommandLocal "test-${neovim-drv.name}" ({ + nativeBuildInputs = [ ]; + meta.platforms = neovim-drv.meta.platforms; + }) ('' + source ${nmt}/bash-lib/assertions.sh + vimrc="${writeText "init.vim" neovim-drv.initRc}" + vimrcGeneric="$out/patched.vim" + mkdir $out + ${pkgs.perl}/bin/perl -pe "s|\Q$NIX_STORE\E/[a-z0-9]{32}-|$NIX_STORE/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-|g" < "$vimrc" > "$vimrcGeneric" + '' + buildCommand); + +in + pkgs.recurseIntoAttrs ( +rec { + vim_empty_config = vimUtils.vimrcFile { beforePlugins = ""; customRC = ""; }; + + ### neovim tests + ################## + nvim_with_plugins = wrapNeovim2 "-with-plugins" nvimConfNix; + + nvim_via_override = neovim.override { + extraName = "-via-override"; + configure = { + packages.foo.start = [ vimPlugins.ale ]; + customRC = '' + :help ale + ''; + }; + }; + + nvim_with_aliases = neovim.override { + extraName = "-with-aliases"; + vimAlias = true; + viAlias = true; + }; + + # nixpkgs should detect that no wrapping is necessary + nvimShouldntWrap = wrapNeovim2 "-should-not-wrap" nvimAutoDisableWrap; + + # this will generate a neovimRc content but we disable wrapping + nvimDontWrap = wrapNeovim2 "-forced-nowrap" (makeNeovimConfig { + wrapRc = false; + customRC = '' + " this shouldn't trigger the creation of an init.vim + ''; + }); + + force-nowrap = runTest nvimDontWrap '' + ! grep "-u" ${nvimDontWrap}/bin/nvim + ''; + + nvim_via_override-test = runTest nvim_via_override '' + assertFileContent \ + "$vimrcGeneric" \ + "${./neovim-override.vim}" + ''; + + + checkAliases = runTest nvim_with_aliases '' + folder=${nvim_with_aliases}/bin + assertFileExists "$folder/vi" + assertFileExists "$folder/vim" + ''; + + # having no RC generated should autodisable init.vim wrapping + nvim_autowrap = runTest nvim_via_override '' + ! grep "-u" ${nvimShouldntWrap}/bin/nvim + ''; + + + # system remote plugin manifest should be generated, deoplete should be usable + # without the user having to do `UpdateRemotePlugins`. To test, launch neovim + # and do `:call deoplete#enable()`. It will print an error if the remote + # plugin is not registered. + test_nvim_with_remote_plugin = neovim.override { + extraName = "-pathogen-remote"; + configure.pathogen.pluginNames = with vimPlugins; [ deoplete-nvim ]; + }; + + # only neovim makes use of `requiredPlugins`, test this here + test_nvim_with_vim_nix_using_pathogen = neovim.override { + extraName = "-pathogen"; + configure.pathogen.pluginNames = [ "vim-nix" ]; + }; +}) diff --git a/third_party/nixpkgs/pkgs/applications/editors/neovim/utils.nix b/third_party/nixpkgs/pkgs/applications/editors/neovim/utils.nix index ae814fa9b4..c753d2cca2 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/neovim/utils.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/neovim/utils.nix @@ -148,6 +148,7 @@ let , vimAlias ? false , viAlias ? false , configure ? {} + , extraName ? "" }: let /* for compatibility with passing extraPythonPackages as a list; added 2018-07-11 */ @@ -160,6 +161,7 @@ let extraPython3Packages = compatFun extraPython3Packages; inherit withNodeJs withRuby viAlias vimAlias; inherit configure; + inherit extraName; }; in assert withPython -> throw "Python2 support has been removed from neovim, please remove withPython and extraPythonPackages."; diff --git a/third_party/nixpkgs/pkgs/applications/editors/neovim/wrapper.nix b/third_party/nixpkgs/pkgs/applications/editors/neovim/wrapper.nix index 7fa15efd82..96b61a43cc 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/neovim/wrapper.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/neovim/wrapper.nix @@ -4,6 +4,7 @@ , nodejs , nodePackages , python3Packages +, callPackage }: with lib; @@ -27,23 +28,24 @@ let # set to false if you want to control where to save the generated config # (e.g., in ~/.config/init.vim or project/.nvimrc) , wrapRc ? true + , neovimRcContent ? "" , ... }@args: let wrapperArgsStr = if isString wrapperArgs then wrapperArgs else lib.escapeShellArgs wrapperArgs; - # If configure != {}, we can't generate the rplugin.vim file with e.g - # NVIM_SYSTEM_RPLUGIN_MANIFEST *and* NVIM_RPLUGIN_MANIFEST env vars set in - # the wrapper. That's why only when configure != {} (tested both here and - # when postBuild is evaluated), we call makeWrapper once to generate a - # wrapper with most arguments we need, excluding those that cause problems to - # generate rplugin.vim, but still required for the final wrapper. - finalMakeWrapperArgs = - [ "${neovim}/bin/nvim" "${placeholder "out"}/bin/nvim" ] - ++ [ "--set" "NVIM_SYSTEM_RPLUGIN_MANIFEST" "${placeholder "out"}/rplugin.vim" ] - ++ optionals wrapRc [ "--add-flags" "-u ${writeText "init.vim" args.neovimRcContent}" ] - ; + # If configure != {}, we can't generate the rplugin.vim file with e.g + # NVIM_SYSTEM_RPLUGIN_MANIFEST *and* NVIM_RPLUGIN_MANIFEST env vars set in + # the wrapper. That's why only when configure != {} (tested both here and + # when postBuild is evaluated), we call makeWrapper once to generate a + # wrapper with most arguments we need, excluding those that cause problems to + # generate rplugin.vim, but still required for the final wrapper. + finalMakeWrapperArgs = + [ "${neovim}/bin/nvim" "${placeholder "out"}/bin/nvim" ] + ++ [ "--set" "NVIM_SYSTEM_RPLUGIN_MANIFEST" "${placeholder "out"}/rplugin.vim" ] + ++ optionals wrapRc [ "--add-flags" "-u ${writeText "init.vim" neovimRcContent}" ] + ; in assert withPython2 -> throw "Python2 support has been removed from the neovim wrapper, please remove withPython2 and python2Env."; @@ -116,7 +118,13 @@ let preferLocalBuild = true; nativeBuildInputs = [ makeWrapper ]; - passthru = { unwrapped = neovim; }; + passthru = { + unwrapped = neovim; + initRc = neovimRcContent; + + tests = callPackage ./tests.nix { + }; + }; meta = neovim.meta // { # To prevent builds on hydra diff --git a/third_party/nixpkgs/pkgs/applications/editors/oed/default.nix b/third_party/nixpkgs/pkgs/applications/editors/oed/default.nix new file mode 100644 index 0000000000..2281ca8c08 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/editors/oed/default.nix @@ -0,0 +1,23 @@ +{ lib +, stdenv +, fetchFromGitHub +}: + +stdenv.mkDerivation rec { + pname = "oed"; + version = "6.7"; + + src = fetchFromGitHub { + owner = "ibara"; + repo = "oed"; + rev = "oed-${version}"; + hash = "sha256-Z8B1RIFve3UPj+9G/WJX0BNc2ynG/qtoGfoesarYGz8="; + }; + + meta = with lib; { + homepage = "https://github.com/ibara/oed"; + description = "Portable ed editor from OpenBSD"; + license = with licenses; [ bsd2 ]; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/editors/poke/default.nix b/third_party/nixpkgs/pkgs/applications/editors/poke/default.nix index f0b8c43546..a24666741e 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/poke/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/poke/default.nix @@ -19,11 +19,11 @@ let isCross = stdenv.hostPlatform != stdenv.buildPlatform; in stdenv.mkDerivation rec { pname = "poke"; - version = "1.2"; + version = "1.3"; src = fetchurl { url = "mirror://gnu/${pname}/${pname}-${version}.tar.gz"; - hash = "sha256-9hz42ltkwBoTWTc3JarRyiV/NcHJJp5NUN0GZBg932I="; + hash = "sha256-unhjA0obCABLDuj4i9qUFgcH6aeB1VVvVVtQdYPPDxs="; }; postPatch = '' @@ -40,7 +40,7 @@ in stdenv.mkDerivation rec { ] ++ lib.optional guiSupport makeWrapper; buildInputs = [ boehmgc readline ] - ++ lib.optional guiSupport tk + ++ lib.optionals guiSupport [ tk tcl.tclPackageHook tcllib ] ++ lib.optional miSupport json_c ++ lib.optional nbdSupport libnbd ++ lib.optional textStylingSupport gettext @@ -57,11 +57,6 @@ in stdenv.mkDerivation rec { doCheck = !isCross; checkInputs = lib.optionals (!isCross) [ dejagnu ]; - postFixup = lib.optionalString guiSupport '' - wrapProgram "$out/bin/poke-gui" \ - --prefix TCLLIBPATH ' ' ${tcllib}/lib/tcllib${tcllib.version} - ''; - meta = with lib; { description = "Interactive, extensible editor for binary data"; homepage = "http://www.jemarch.net/poke"; diff --git a/third_party/nixpkgs/pkgs/applications/editors/tiled/default.nix b/third_party/nixpkgs/pkgs/applications/editors/tiled/default.nix index 4fbbacf8f1..fe32da4a42 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/tiled/default.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/tiled/default.nix @@ -3,13 +3,13 @@ mkDerivation rec { pname = "tiled"; - version = "1.5.0"; + version = "1.7.0"; src = fetchFromGitHub { owner = "bjorn"; repo = pname; rev = "v${version}"; - sha256 = "sha256-Pf9nA5DUAJ+PPNG+oP7RO4/TD8fy4ADsyq625a6cbFk="; + sha256 = "sha256-XVIkyf9cQZXjFuGGCliCSY22X8EkoPEl1EpGCrMTsgY="; }; nativeBuildInputs = [ pkg-config qmake ]; diff --git a/third_party/nixpkgs/pkgs/applications/editors/vim/configurable.nix b/third_party/nixpkgs/pkgs/applications/editors/vim/configurable.nix index 4215b20180..5e1d9dc9cb 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/vim/configurable.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/vim/configurable.nix @@ -175,7 +175,8 @@ in stdenv.mkDerivation rec { ln -sfn '${nixosRuntimepath}' "$out"/share/vim/vimrc '' + lib.optionalString wrapPythonDrv '' - wrapProgram "$out/bin/vim" --prefix PATH : "${python3}/bin" + wrapProgram "$out/bin/vim" --prefix PATH : "${python3}/bin" \ + --set NIX_PYTHONPATH "${python3}/${python3.sitePackages}" '' + lib.optionalString (guiSupport == "gtk3") '' rewrap () { diff --git a/third_party/nixpkgs/pkgs/applications/editors/vscode/vscode.nix b/third_party/nixpkgs/pkgs/applications/editors/vscode/vscode.nix index fd1cb7153e..1a4b3e6c06 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/vscode/vscode.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/vscode/vscode.nix @@ -13,16 +13,16 @@ let archive_fmt = if system == "x86_64-darwin" then "zip" else "tar.gz"; sha256 = { - x86_64-linux = "08qrag9nzmngzzvs2cgbmc4zzxlb9kwn183v8caj6dvcrjvfqgbv"; - x86_64-darwin = "0rlyr08lla3xadlh373xqcks8a9akk3x2cmakgn17q2b16988fmq"; - aarch64-linux = "1m277940xsasqac4i88s05xrqsab99jhl3ka0zzfbixrgr2dj8q1"; - armv7l-linux = "1qm4cggjj50vdnrx848x810gz3ahh0hndra22lsvcjdbsw8g35rk"; + x86_64-linux = "0cklp0mp7qylzrqnfbvzs308q0bzpswlqw5n98qhl1jb5783svx1"; + x86_64-darwin = "04yyv0wpkzdjfiy9kj2jslhv7nc5i6nw2207vfnbzysgs55l3x63"; + aarch64-linux = "1ygk51902g0q7x3r6kd3s7gi2gx86x10svpvbipl494qcyfngqzs"; + armv7l-linux = "0z5rg1nl8lz7zsvml6dfz093dbyrkr4zvvfssqiyarw4n24d2mim"; }.${system}; in callPackage ./generic.nix rec { # Please backport all compatible updates to the stable release. # This is important for the extension ecosystem. - version = "1.56.2"; + version = "1.57.1"; pname = "vscode"; executableName = "code" + lib.optionalString isInsiders "-insiders"; diff --git a/third_party/nixpkgs/pkgs/applications/editors/vscode/vscodium.nix b/third_party/nixpkgs/pkgs/applications/editors/vscode/vscodium.nix index 7dadd02a44..849f435eb3 100644 --- a/third_party/nixpkgs/pkgs/applications/editors/vscode/vscodium.nix +++ b/third_party/nixpkgs/pkgs/applications/editors/vscode/vscodium.nix @@ -13,10 +13,10 @@ let archive_fmt = if system == "x86_64-darwin" then "zip" else "tar.gz"; sha256 = { - x86_64-linux = "1gw2273ab0gdyav6mz7wk7d6g6cwcdvx0xaghvm610m1pvkbvxkz"; - x86_64-darwin = "1zfzsr8gybmpmxc3jlfj6sx3m6ny6hc3dxvpgffni7k5zgv651df"; - aarch64-linux = "079bp48h0qfpsbyir2qg3w1f43dc68ngmxqdqb3jnkx721affjzs"; - armv7l-linux = "1d9243hk07xawv44909lk6y6bnvy0wjhy8xl13n3a11pg3djn5bm"; + x86_64-linux = "16s3hznyrz9w0cns8fk3pzk9ai5dj9y5p4n1rf3hrpg5hi9yxi5j"; + x86_64-darwin = "133p032c8gv3hx4x7kxdfhz4xvkpjmjnvy02sf05dxqv5nly4xx4"; + aarch64-linux = "183f674qyrlz0wqx6x48z6jhl8z30zmwsj8021hqi8px5ny99l1f"; + armv7l-linux = "0rf3ybha861r5pfp6rvh21abfagaiwqlsbxm7fhphrc5382lmxbs"; }.${system}; sourceRoot = { @@ -31,7 +31,7 @@ in # Please backport all compatible updates to the stable release. # This is important for the extension ecosystem. - version = "1.56.2"; + version = "1.57.1"; pname = "vscodium"; executableName = "codium"; diff --git a/third_party/nixpkgs/pkgs/applications/gis/gmt/default.nix b/third_party/nixpkgs/pkgs/applications/gis/gmt/default.nix index 0e2b45888b..a894d121bd 100644 --- a/third_party/nixpkgs/pkgs/applications/gis/gmt/default.nix +++ b/third_party/nixpkgs/pkgs/applications/gis/gmt/default.nix @@ -9,10 +9,10 @@ stdenv.mkDerivation rec { pname = "gmt"; - version = "6.1.1"; + version = "6.2.0"; src = fetchurl { url = "https://github.com/GenericMappingTools/gmt/releases/download/${version}/gmt-${version}-src.tar.gz"; - sha256 = "04mdxxcild56jhg9ax522xh78v1wl1x8iqv2f6wv32x9b2lgy1lp"; + sha256 = "sha256-q3BikSrurRAhdw+tR1bgqZhg/ejqm0KPsAwi+hWju/w="; }; nativeBuildInputs = [ cmake ]; diff --git a/third_party/nixpkgs/pkgs/applications/gis/qgis/unwrapped.nix b/third_party/nixpkgs/pkgs/applications/gis/qgis/unwrapped.nix index 5b972ae501..2ebe0ac253 100644 --- a/third_party/nixpkgs/pkgs/applications/gis/qgis/unwrapped.nix +++ b/third_party/nixpkgs/pkgs/applications/gis/qgis/unwrapped.nix @@ -77,12 +77,12 @@ in mkDerivation rec { # build to use PYQT5_SIP_DIR consistently. postPatch = '' substituteInPlace cmake/FindPyQt5.py \ - --replace 'sip_dir = cfg.default_sip_dir' 'sip_dir = "${python3Packages.pyqt5}/share/sip/PyQt5"' + --replace 'sip_dir = cfg.default_sip_dir' 'sip_dir = "${python3Packages.pyqt5}/${python3Packages.python.sitePackages}/PyQt5/bindings"' ''; cmakeFlags = [ "-DCMAKE_SKIP_BUILD_RPATH=OFF" - "-DPYQT5_SIP_DIR=${python3Packages.pyqt5}/share/sip/PyQt5" + "-DPYQT5_SIP_DIR=${python3Packages.pyqt5}/${python3Packages.python.sitePackages}/PyQt5/bindings" "-DQSCI_SIP_DIR=${python3Packages.qscintilla-qt5}/share/sip/PyQt5" ] ++ lib.optional (!withWebKit) "-DWITH_QTWEBKIT=OFF" ++ lib.optional withGrass "-DGRASS_PREFIX7=${grass}/${grass.name}"; diff --git a/third_party/nixpkgs/pkgs/applications/graphics/ImageMagick/6.x.nix b/third_party/nixpkgs/pkgs/applications/graphics/ImageMagick/6.x.nix index e8a8824936..5fea254ce0 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/ImageMagick/6.x.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/ImageMagick/6.x.nix @@ -16,13 +16,13 @@ in stdenv.mkDerivation rec { pname = "imagemagick"; - version = "6.9.12-12"; + version = "6.9.12-17"; src = fetchFromGitHub { owner = "ImageMagick"; repo = "ImageMagick6"; rev = version; - sha256 = "sha256-yqMYuayQjPlTqi3+CtwP5CdsAGud/fHR0I2LwUPIq00="; + sha256 = "sha256-yZXvxl9Tbl3JRBmRcfsjbkaxywtD08SuUnJayKfwk9M="; }; outputs = [ "out" "dev" "doc" ]; # bin/ isn't really big diff --git a/third_party/nixpkgs/pkgs/applications/graphics/ImageMagick/7.0.nix b/third_party/nixpkgs/pkgs/applications/graphics/ImageMagick/7.0.nix index 27c3e31b28..e2fdb19127 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/ImageMagick/7.0.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/ImageMagick/7.0.nix @@ -18,13 +18,13 @@ in stdenv.mkDerivation rec { pname = "imagemagick"; - version = "7.0.11-9"; + version = "7.1.0-0"; src = fetchFromGitHub { owner = "ImageMagick"; repo = "ImageMagick"; rev = version; - sha256 = "sha256-eL9zFrgkLb3pS8/UlQB5+p50UG8j3Q7TNDwcO/3BuXo="; + sha256 = "sha256-TmyJMzj5tHMrVm6xRguZmXIg7c6mHmqusMMdJAHNqNg="; }; outputs = [ "out" "dev" "doc" ]; # bin/ isn't really big diff --git a/third_party/nixpkgs/pkgs/applications/graphics/avocode/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/avocode/default.nix index 5159335333..6cd07fd373 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/avocode/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/avocode/default.nix @@ -1,15 +1,15 @@ { lib, stdenv, makeDesktopItem, fetchurl, unzip -, gdk-pixbuf, glib, gtk3, atk, at-spi2-atk, pango, cairo, freetype, fontconfig, dbus, nss, nspr, alsaLib, cups, expat, udev, gnome +, gdk-pixbuf, glib, gtk3, atk, at-spi2-atk, pango, cairo, freetype, fontconfig, dbus, nss, nspr, alsa-lib, cups, expat, udev, gnome , xorg, mozjpeg, makeWrapper, wrapGAppsHook, libuuid, at-spi2-core, libdrm, mesa, libxkbcommon }: stdenv.mkDerivation rec { pname = "avocode"; - version = "4.14.0"; + version = "4.14.3"; src = fetchurl { url = "https://media.avocode.com/download/avocode-app/${version}/avocode-${version}-linux.zip"; - sha256 = "sha256-BDW87UVN1Jub0sJFvtkZr5ssz835Yf2CNn5kHCn70cE="; + sha256 = "sha256-6OEgSnW96jufc/Z+B17ghtAbj9SLulue26ffKREGzbY="; }; libPath = lib.makeLibraryPath (with xorg; [ @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { dbus nss nspr - alsaLib + alsa-lib cups expat udev diff --git a/third_party/nixpkgs/pkgs/applications/graphics/cq-editor/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/cq-editor/default.nix index cf94f4fa32..b9b2eb3687 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/cq-editor/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/cq-editor/default.nix @@ -16,13 +16,17 @@ mkDerivationWith python3Packages.buildPythonApplication rec { sha256 = "1970izjaa60r5cg9i35rzz9lk5c5d8q1vw1rh2skvfbf63z1hnzv"; }; + patches = [ + ./spyder4.patch + ]; + propagatedBuildInputs = with python3Packages; [ cadquery Logbook pyqt5 pyparsing pyqtgraph - spyder_3 + spyder pathpy qtconsole requests diff --git a/third_party/nixpkgs/pkgs/applications/graphics/cq-editor/spyder4.patch b/third_party/nixpkgs/pkgs/applications/graphics/cq-editor/spyder4.patch new file mode 100644 index 0000000000..49813b18a0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/graphics/cq-editor/spyder4.patch @@ -0,0 +1,58 @@ +diff --git a/cq_editor/widgets/debugger.py b/cq_editor/widgets/debugger.py +index b7398fb..d039db5 100644 +--- a/cq_editor/widgets/debugger.py ++++ b/cq_editor/widgets/debugger.py +@@ -162,7 +162,7 @@ class Debugger(QObject,ComponentMixin): + + def get_breakpoints(self): + +- return self.parent().components['editor'].get_breakpoints() ++ return self.parent().components['editor'].debugger.get_breakpoints() + + def compile_code(self,cq_script): + +@@ -178,12 +178,14 @@ class Debugger(QObject,ComponentMixin): + def _exec(self, code, locals_dict, globals_dict): + + with ExitStack() as stack: +- p = Path(self.parent().components['editor'].filename).dirname() +- if self.preferences['Add script dir to path'] and p: ++ fname = self.parent().components['editor'].filename ++ p = Path(fname if fname else '').abspath().dirname() ++ if self.preferences['Add script dir to path'] and p.exists(): + sys.path.append(p) + stack.callback(sys.path.remove, p) +- if self.preferences['Change working dir to script dir'] and p: ++ if self.preferences['Change working dir to script dir'] and p.exists(): + stack.enter_context(p) ++ + exec(code, locals_dict, globals_dict) + + def _inject_locals(self,module): +diff --git a/cq_editor/widgets/editor.py b/cq_editor/widgets/editor.py +index 45aa048..2763469 100644 +--- a/cq_editor/widgets/editor.py ++++ b/cq_editor/widgets/editor.py +@@ -1,4 +1,4 @@ +-from spyder.widgets.sourcecode.codeeditor import CodeEditor ++from spyder.plugins.editor.widgets.codeeditor import CodeEditor + from PyQt5.QtCore import pyqtSignal, QFileSystemWatcher, QTimer + from PyQt5.QtWidgets import QAction, QFileDialog + from PyQt5.QtGui import QFontDatabase +@@ -32,6 +32,8 @@ class Editor(CodeEditor,ComponentMixin): + + def __init__(self,parent=None): + ++ self._watched_file = None ++ + super(Editor,self).__init__(parent) + ComponentMixin.__init__(self) + +@@ -83,7 +85,6 @@ class Editor(CodeEditor,ComponentMixin): + + # autoreload support + self._file_watcher = QFileSystemWatcher(self) +- self._watched_file = None + # we wait for 50ms after a file change for the file to be written completely + self._file_watch_timer = QTimer(self) + self._file_watch_timer.setInterval(50) diff --git a/third_party/nixpkgs/pkgs/applications/graphics/drawio/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/drawio/default.nix index e8ef97f949..05e94bb164 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/drawio/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/drawio/default.nix @@ -1,7 +1,7 @@ { stdenv, lib, fetchurl, rpmextract, autoPatchelfHook, wrapGAppsHook # Dynamic libraries -, alsaLib, atk, at-spi2-atk, at-spi2-core, cairo, dbus, cups, expat +, alsa-lib, atk, at-spi2-atk, at-spi2-core, cairo, dbus, cups, expat , gdk-pixbuf, glib, gtk3, libX11, libXScrnSaver, libXcomposite, libXcursor , libXdamage, libXext, libXfixes, libXi, libXrandr, libXrender, libXtst , libxcb, libuuid, libxshmfence, nspr, nss, pango, mesa @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib atk at-spi2-atk at-spi2-core diff --git a/third_party/nixpkgs/pkgs/applications/graphics/fluxus/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/fluxus/default.nix index acec529310..3db183b253 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/fluxus/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/fluxus/default.nix @@ -1,6 +1,6 @@ { lib, stdenv , fetchFromGitLab -, alsaLib +, alsa-lib , bzip2 , fftw , freeglut @@ -23,7 +23,7 @@ }: let libs = [ - alsaLib + alsa-lib bzip2 fftw freeglut @@ -54,7 +54,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ - alsaLib + alsa-lib fftw freeglut.dev freetype diff --git a/third_party/nixpkgs/pkgs/applications/graphics/foxotron/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/foxotron/default.nix index d886252503..2ccc6ed401 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/foxotron/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/foxotron/default.nix @@ -13,7 +13,7 @@ , libXi , libXext , libGLU -, alsaLib +, alsa-lib , fontconfig , AVFoundation , Carbon @@ -38,7 +38,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config makeWrapper ]; buildInputs = [ zlib ] - ++ lib.optionals stdenv.hostPlatform.isLinux [ libX11 libXrandr libXinerama libXcursor libXi libXext alsaLib fontconfig libGLU ] + ++ lib.optionals stdenv.hostPlatform.isLinux [ libX11 libXrandr libXinerama libXcursor libXi libXext alsa-lib fontconfig libGLU ] ++ lib.optionals stdenv.hostPlatform.isDarwin [ AVFoundation Carbon Cocoa CoreAudio Kernel OpenGL ]; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/graphics/graphicsmagick/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/graphicsmagick/default.nix index 583dcf7c61..13752bfc05 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/graphicsmagick/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/graphicsmagick/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, bzip2, freetype, graphviz, ghostscript , libjpeg, libpng, libtiff, libxml2, zlib, libtool, xz, libX11 -, libwebp, quantumdepth ? 8, fixDarwinDylibNames }: +, libwebp, quantumdepth ? 8, fixDarwinDylibNames, nukeReferences }: stdenv.mkDerivation rec { pname = "graphicsmagick"; @@ -27,8 +27,14 @@ stdenv.mkDerivation rec { zlib libtool libwebp ]; - nativeBuildInputs = [ xz ] - ++ lib.optional stdenv.hostPlatform.isDarwin fixDarwinDylibNames; + nativeBuildInputs = [ xz nukeReferences ] + ++ lib.optional stdenv.hostPlatform.isDarwin fixDarwinDylibNames; + + # Remove CFLAGS from the binaries to avoid closure bloat. + # In the past we have had -dev packages in the closure of the binaries soley due to the string references. + postConfigure = '' + nuke-refs ./magick/magick_config.h + ''; postInstall = '' sed -i 's/-ltiff.*'\'/\'/ $out/bin/* diff --git a/third_party/nixpkgs/pkgs/applications/graphics/imagej/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/imagej/default.nix index 65d3c9735d..0dbc2d5d4e 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/imagej/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/imagej/default.nix @@ -1,48 +1,74 @@ -{ lib, stdenv, fetchurl, jre, unzip, makeWrapper }: - -# Note: -# - User config dir is hard coded by upstream to $HOME/.imagej on linux systems -# and to $HOME/Library/Preferences on macOS. -# (The current trend appears to be to use $HOME/.config/imagej -# on linux systems, but we here do not attempt to fix it.) +{ lib +, stdenv +, fetchurl +, jre +, unzip +, makeWrapper +, makeDesktopItem +, copyDesktopItems +}: let - imagej150 = stdenv.mkDerivation { - pname = "imagej"; - version = "150"; - - src = fetchurl { - url = "https://wsr.imagej.net/distros/cross-platform/ij150.zip"; - sha256 = "97aba6fc5eb908f5160243aebcdc4965726693cb1353d9c0d71b8f5dd832cb7b"; - }; - nativeBuildInputs = [ makeWrapper unzip ]; - inherit jre; - - # JAR files that are intended to be used by other packages - # should go to $out/share/java. - # (Some uses ij.jar as a library not as a standalone program.) - installPhase = '' - mkdir -p $out/share/java - # Read permisssion suffices for the jar and others. - # Simple cp shall clear suid bits, if any. - cp ij.jar $out/share/java - cp -dR luts macros plugins $out/share - mkdir $out/bin - makeWrapper ${jre}/bin/java $out/bin/imagej \ - --add-flags "-jar $out/share/java/ij.jar -ijpath $out/share" - ''; - meta = with lib; { - homepage = "https://imagej.nih.gov/ij/"; - description = "Image processing and analysis in Java"; - longDescription = '' - ImageJ is a public domain Java image processing program - inspired by NIH Image for the Macintosh. - It runs on any computer with a Java 1.4 or later virtual machine. - ''; - license = licenses.publicDomain; - platforms = with platforms; linux ++ darwin; - maintainers = with maintainers; [ yuriaisaka ]; - }; + icon = fetchurl { + url = "https://imagej.net/media/icons/imagej.png"; + sha256 = "sha256-nU2nWI1wxZB/xlOKsZzdUjj+qiCTjO6GwEKYgZ5Risg="; }; -in - imagej150 +in stdenv.mkDerivation rec { + pname = "imagej"; + version = "153"; + + src = fetchurl { + url = "https://wsr.imagej.net/distros/cross-platform/ij${version}.zip"; + sha256 = "sha256-MGuUdUDuW3s/yGC68rHr6xxzmYScUjdXRawDpc1UQqw="; + }; + nativeBuildInputs = [ copyDesktopItems makeWrapper unzip ]; + desktopItems = lib.optionals stdenv.isLinux [ + (makeDesktopItem { + name = "ImageJ"; + desktopName = "ImageJ"; + icon = "imagej"; + categories = "Science;Utility;Graphics;"; + exec = "imagej"; + }) + ]; + + passthru = { + inherit jre; + }; + + # JAR files that are intended to be used by other packages + # should go to $out/share/java. + # (Some uses ij.jar as a library not as a standalone program.) + installPhase = '' + runHook preInstall + + mkdir -p $out/share/java $out/bin + # Read permisssion suffices for the jar and others. + # Simple cp shall clear suid bits, if any. + cp ij.jar $out/share/java + cp -dR luts macros plugins $out/share + makeWrapper ${jre}/bin/java $out/bin/imagej \ + --add-flags "-jar $out/share/java/ij.jar -ijpath $out/share" + + runHook postInstall + ''; + + postFixup = lib.optionalString stdenv.isLinux '' + install -Dm644 ${icon} $out/share/icons/hicolor/128x128/apps/imagej.png + substituteInPlace $out/share/applications/ImageJ.desktop \ + --replace Exec=imagej Exec=$out/bin/imagej + ''; + + meta = with lib; { + homepage = "https://imagej.nih.gov/ij/"; + description = "Image processing and analysis in Java"; + longDescription = '' + ImageJ is a public domain Java image processing program + inspired by NIH Image for the Macintosh. + It runs on any computer with a Java 1.4 or later virtual machine. + ''; + license = licenses.publicDomain; + platforms = platforms.unix; + maintainers = with maintainers; [ yuriaisaka ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/graphics/imv/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/imv/default.nix index 3f6a27cbc7..e9488b845f 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/imv/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/imv/default.nix @@ -5,7 +5,6 @@ , cmocka , docbook_xsl , libxslt -, fontconfig , meson , ninja , pkg-config @@ -90,6 +89,12 @@ stdenv.mkDerivation rec { ] ++ windowSystems."${withWindowSystem}" ++ builtins.map (b: backends."${b}") withBackends; + postInstall = '' + # fix the executable path and install the desktop item + substituteInPlace ../files/imv.desktop --replace "imv %F" "$out/bin/imv %F" + install -Dm644 ../files/imv.desktop $out/share/applications/ + ''; + postFixup = lib.optionalString (withWindowSystem == "all") '' # The `bin/imv` script assumes imv-wayland or imv-x11 in PATH, # so we have to fix those to the binaries we installed into the /nix/store @@ -104,7 +109,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "A command line image viewer for tiling window managers"; homepage = "https://github.com/eXeC64/imv"; - license = licenses.gpl2; + license = licenses.mit; maintainers = with maintainers; [ rnhmjoj markus1189 ]; platforms = platforms.all; }; diff --git a/third_party/nixpkgs/pkgs/applications/graphics/inkscape/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/inkscape/default.nix index 813db09847..c65dfa1b6c 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/inkscape/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/inkscape/default.nix @@ -4,6 +4,7 @@ , cairo , cmake , fetchurl +, fetchpatch , gettext , ghostscript , glib @@ -71,6 +72,15 @@ stdenv.mkDerivation rec { # e.g., those from the "Effects" menu. python3 = "${python3Env}/bin/python"; }) + + # Fix parsing paths by Python extensions. + # https://gitlab.com/inkscape/extensions/-/merge_requests/342 + (fetchpatch { + url = "https://gitlab.com/inkscape/extensions/-/commit/a82c382c610d37837c8f3f5b13224bab8fd3667e.patch"; + sha256 = "YWrgjCnQ9q6BUsxSLQojIXnDzPxM/SgrIfj1gxQ/JKM="; + stripLen = 1; + extraPrefix = "share/extensions/"; + }) ]; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/applications/graphics/inkscape/extensions.nix b/third_party/nixpkgs/pkgs/applications/graphics/inkscape/extensions.nix index affd934e93..63010a19f1 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/inkscape/extensions.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/inkscape/extensions.nix @@ -2,9 +2,12 @@ , fetchFromGitHub , runCommand , inkcut +, callPackage }: { + applytransforms = callPackage ./extensions/applytransforms { }; + hexmap = stdenv.mkDerivation { name = "hexmap"; version = "2020-06-06"; diff --git a/third_party/nixpkgs/pkgs/applications/graphics/inkscape/extensions/applytransforms/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/inkscape/extensions/applytransforms/default.nix new file mode 100644 index 0000000000..131daffffb --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/graphics/inkscape/extensions/applytransforms/default.nix @@ -0,0 +1,42 @@ +{ lib +, stdenv +, fetchFromGitHub +, python3 +}: + +stdenv.mkDerivation { + pname = "inkscape-applytransforms"; + version = "0.0.0+unstable=2021-05-11"; + + src = fetchFromGitHub { + owner = "Klowner"; + repo = "inkscape-applytransforms"; + rev = "5b3ed4af0fb66e399e686fc2b649b56db84f6042"; + sha256 = "XWwkuw+Um/cflRWjIeIgQUxJLrk2DLDmx7K+pMWvIlI="; + }; + + checkInputs = [ + python3.pkgs.inkex + python3.pkgs.pytestCheckHook + ]; + + dontBuild = true; + + doCheck = true; + + installPhase = '' + runHook preInstall + + install -Dt "$out/share/inkscape/extensions" *.inx *.py + + runHook postInstall + ''; + + meta = with lib; { + description = "Inkscape extension which removes all matrix transforms by applying them recursively to shapes"; + homepage = "https://github.com/Klowner/inkscape-applytransforms"; + license = licenses.gpl2Only; + maintainers = with maintainers; [ jtojnar ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/graphics/inkscape/with-extensions.nix b/third_party/nixpkgs/pkgs/applications/graphics/inkscape/with-extensions.nix index c558a6bb06..14fffadd03 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/inkscape/with-extensions.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/inkscape/with-extensions.nix @@ -2,13 +2,19 @@ , inkscape , symlinkJoin , makeWrapper -, inkscapeExtensions ? [] +, inkscapeExtensions ? [ ] +, inkscape-extensions }: +let + allExtensions = lib.filter (pkg: lib.isDerivation pkg && !pkg.meta.broken or false) (lib.attrValues inkscape-extensions); + selectedExtensions = if inkscapeExtensions == null then allExtensions else inkscapeExtensions; +in + symlinkJoin { name = "inkscape-with-extensions-${lib.getVersion inkscape}"; - paths = [ inkscape ] ++ inkscapeExtensions; + paths = [ inkscape ] ++ selectedExtensions; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/applications/graphics/kodelife/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/kodelife/default.nix index 2ac507dc87..1c4609ac55 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/kodelife/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/kodelife/default.nix @@ -1,6 +1,6 @@ { lib, stdenv , fetchzip -, alsaLib +, alsa-lib , glib , gst_all_1 , libGLU, libGL @@ -42,7 +42,7 @@ stdenv.mkDerivation rec { preFixup = let libPath = lib.makeLibraryPath [ stdenv.cc.cc.lib - alsaLib + alsa-lib glib gst_all_1.gstreamer gst_all_1.gst-plugins-base diff --git a/third_party/nixpkgs/pkgs/applications/graphics/krita/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/krita/default.nix index 0c5a0fe6e3..85830f9a04 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/krita/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/krita/default.nix @@ -3,18 +3,18 @@ , kguiaddons, ki18n, kitemmodels, kitemviews, kwindowsystem , kio, kcrash, breeze-icons , boost, libraw, fftw, eigen, exiv2, libheif, lcms2, gsl, openexr, giflib -, openjpeg, opencolorio, vc, poppler, curl, ilmbase +, openjpeg, opencolorio_1, vc, poppler, curl, ilmbase , qtmultimedia, qtx11extras, quazip , python3Packages }: mkDerivation rec { pname = "krita"; - version = "4.4.3"; + version = "4.4.5"; src = fetchurl { url = "https://download.kde.org/stable/${pname}/${version}/${pname}-${version}.tar.gz"; - sha256 = "0rwghzci2wn2jmisvnzs23yxc2z3d4dcx2qbbhcvjyi3q8ij61nl"; + sha256 = "sha256-S/1ygIcNEGCgDREj2Db8Gltb+KAoZ2Z58CaM1ef7dWg="; }; nativeBuildInputs = [ cmake extra-cmake-modules python3Packages.sip_4 makeWrapper ]; @@ -23,7 +23,7 @@ mkDerivation rec { karchive kconfig kwidgetsaddons kcompletion kcoreaddons kguiaddons ki18n kitemmodels kitemviews kwindowsystem kio kcrash breeze-icons boost libraw fftw eigen exiv2 lcms2 gsl openexr libheif giflib - openjpeg opencolorio poppler curl ilmbase + openjpeg opencolorio_1 poppler curl ilmbase qtmultimedia qtx11extras quazip python3Packages.pyqt5 ] ++ lib.optional (stdenv.hostPlatform.isi686 || stdenv.hostPlatform.isx86_64) vc; @@ -32,8 +32,8 @@ mkDerivation rec { ++ lib.optional stdenv.cc.isGNU "-Wno-deprecated-copy"; cmakeFlags = [ - "-DPYQT5_SIP_DIR=${python3Packages.pyqt5}/share/sip/PyQt5" - "-DPYQT_SIP_DIR_OVERRIDE=${python3Packages.pyqt5}/share/sip/PyQt5" + "-DPYQT5_SIP_DIR=${python3Packages.pyqt5}/${python3Packages.python.sitePackages}/PyQt5/bindings" + "-DPYQT_SIP_DIR_OVERRIDE=${python3Packages.pyqt5}/${python3Packages.python.sitePackages}/PyQt5/bindings" "-DCMAKE_BUILD_TYPE=RelWithDebInfo" ]; diff --git a/third_party/nixpkgs/pkgs/applications/graphics/megapixels/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/megapixels/default.nix index dbcf0fba29..1e9540ef95 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/megapixels/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/megapixels/default.nix @@ -26,13 +26,13 @@ let in stdenv.mkDerivation rec { pname = "megapixels"; - version = "1.0.1"; + version = "1.1.0"; src = fetchFromSourcehut { owner = "~martijnbraam"; repo = "megapixels"; rev = version; - sha256 = "0k9a5dpr5z0g7ngbhk4j22sbs1ffxiwg8wmbzgggdc9xvwmkgppr"; + sha256 = "0y56c6vchlzidfmp3a3bdc228vbhy7zaxvmhkyxchfb752yzr0n3"; }; nativeBuildInputs = [ meson ninja pkg-config wrapGAppsHook ]; diff --git a/third_party/nixpkgs/pkgs/applications/graphics/openboard/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/openboard/default.nix index ca51d74a0a..b30dbab157 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/openboard/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/openboard/default.nix @@ -1,6 +1,6 @@ { mkDerivation, lib, fetchFromGitHub, copyDesktopItems, makeDesktopItem, qmake , qtbase, qtxmlpatterns, qttools, qtwebkit, libGL, fontconfig, openssl, poppler -, ffmpeg, libva, alsaLib, SDL, x264, libvpx, libvorbis, libtheora, libogg +, ffmpeg, libva, alsa-lib, SDL, x264, libvpx, libvorbis, libtheora, libogg , libopus, lame, fdk_aac, libass, quazip, libXext, libXfixes }: let @@ -52,7 +52,7 @@ in mkDerivation rec { poppler ffmpeg libva - alsaLib + alsa-lib SDL x264 libvpx diff --git a/third_party/nixpkgs/pkgs/applications/graphics/openimageio/2.x.nix b/third_party/nixpkgs/pkgs/applications/graphics/openimageio/2.x.nix index 771af51335..8c9639e3fd 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/openimageio/2.x.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/openimageio/2.x.nix @@ -7,7 +7,7 @@ , libjpeg , libpng , libtiff -, opencolorio +, opencolorio_1 , openexr , robin-map , unzip @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { libjpeg libpng libtiff - opencolorio + opencolorio_1 openexr robin-map fmt diff --git a/third_party/nixpkgs/pkgs/applications/graphics/openimageio/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/openimageio/default.nix index 2461fcc276..e5262ab98d 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/openimageio/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/openimageio/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, boost, cmake, ilmbase, libjpeg, libpng, libtiff -, opencolorio, openexr, unzip +, opencolorio_1, openexr, unzip }: stdenv.mkDerivation rec { @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake unzip ]; buildInputs = [ boost ilmbase libjpeg libpng - libtiff opencolorio openexr + libtiff opencolorio_1 openexr ]; cmakeFlags = [ diff --git a/third_party/nixpkgs/pkgs/applications/graphics/pencil/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/pencil/default.nix index be3b07bf4c..5c5557d6d6 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/pencil/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/pencil/default.nix @@ -1,13 +1,13 @@ { stdenv, fetchurl, lib, makeWrapper, wrapGAppsHook, # build dependencies - alsaLib, atk, at-spi2-atk, at-spi2-core, cairo, cups, dbus, expat, fontconfig, + alsa-lib, atk, at-spi2-atk, at-spi2-core, cairo, cups, dbus, expat, fontconfig, freetype, gdk-pixbuf, glib, glibc, gtk3, libuuid, nspr, nss, pango, xorg, systemd }: let deps = [ - alsaLib + alsa-lib atk at-spi2-atk at-spi2-core diff --git a/third_party/nixpkgs/pkgs/applications/graphics/renderdoc/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/renderdoc/default.nix index 597bd1f170..d6a2658d86 100644 --- a/third_party/nixpkgs/pkgs/applications/graphics/renderdoc/default.nix +++ b/third_party/nixpkgs/pkgs/applications/graphics/renderdoc/default.nix @@ -13,14 +13,14 @@ let pythonPackages = python3Packages; in mkDerivation rec { - version = "1.13"; + version = "1.14"; pname = "renderdoc"; src = fetchFromGitHub { owner = "baldurk"; repo = "renderdoc"; rev = "v${version}"; - sha256 = "MBvdnB1YPeCaXSgqqtGs0SMocbarjmaWtIUkBBCvufc="; + sha256 = "VO7pOLodXI0J7O4Y9b7YSl5BdtsIxmalFG5mqfuiJEw="; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/graphics/veusz/default.nix b/third_party/nixpkgs/pkgs/applications/graphics/veusz/default.nix new file mode 100644 index 0000000000..d8f1ae76a8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/graphics/veusz/default.nix @@ -0,0 +1,71 @@ +{ python3Packages +, qtbase +, ghostscript +, wrapQtAppsHook +, lib +}: + +python3Packages.buildPythonApplication rec { + pname = "veusz"; + version = "3.3.1"; + + src = python3Packages.fetchPypi { + inherit pname version; + sha256 = "4ClgYwiU21wHDve2q9cItSAVb9hbR2F+fJc8znGI8OA="; + }; + + nativeBuildInputs = [ wrapQtAppsHook python3Packages.sip_4 ]; + + buildInputs = [ qtbase ]; + + # veusz is a script and not an ELF-executable, so wrapQtAppsHook will not wrap + # it automatically -> we have to do it explicitly + dontWrapQtApps = true; + preFixup = '' + wrapQtApp "$out/bin/veusz" + ''; + + # Since sip 6 (we use sip 4 here, but pyqt5 is built with sip 6), sip files are + # placed in a different directory layout and --sip-dir won't work anymore. + # --sip-dir expects a directory with a PyQt5 subdirectory (where sip files are located), + # but the new directory layout places sip files in a subdirectory named 'bindings'. + # To workaround this, we patch the full path into pyqtdistutils.py. + postPatch = '' + substituteInPlace pyqtdistutils.py \ + --replace "'-I', pyqt5_include_dir," "'-I', '${python3Packages.pyqt5}/${python3Packages.python.sitePackages}/PyQt5/bindings'," + patchShebangs tests/runselftest.py + ''; + + # you can find these options at + # https://github.com/veusz/veusz/blob/53b99dffa999f2bc41fdc5335d7797ae857c761f/pyqtdistutils.py#L71 + # --sip-dir cannot be used here for the reasons explained above + setupPyBuildFlags = [ + "--qt-include-dir=${qtbase.dev}/include" + # veusz tries to find a libinfix and fails without one + # but we simply don't need a libinfix, so set it to empty here + "--qt-libinfix=" + ]; + + propagatedBuildInputs = with python3Packages; [ + numpy + pyqt5 + # optional requirements: + dbus-python + h5py + # astropy -- fails to build on master + # optional TODO: add iminuit, pyemf and sampy + ]; + + installCheckPhase = '' + wrapQtApp "tests/runselftest.py" + QT_QPA_PLATFORM=minimal tests/runselftest.py + ''; + + meta = with lib; { + description = "A scientific plotting and graphing program with a GUI"; + homepage = "https://veusz.github.io/"; + license = licenses.gpl2Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ laikq ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/kde/kdenlive/default.nix b/third_party/nixpkgs/pkgs/applications/kde/kdenlive/default.nix index 3beaa4427d..8ec2d2a81b 100644 --- a/third_party/nixpkgs/pkgs/applications/kde/kdenlive/default.nix +++ b/third_party/nixpkgs/pkgs/applications/kde/kdenlive/default.nix @@ -102,5 +102,6 @@ mkDerivation { meta = { license = with lib.licenses; [ gpl2Plus ]; + maintainers = with lib.maintainers; [ turion ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/kde/kmail.nix b/third_party/nixpkgs/pkgs/applications/kde/kmail.nix index d5d61694e6..1a33eb2fe2 100644 --- a/third_party/nixpkgs/pkgs/applications/kde/kmail.nix +++ b/third_party/nixpkgs/pkgs/applications/kde/kmail.nix @@ -1,14 +1,53 @@ -{ - mkDerivation, lib, kdepimTeam, - extra-cmake-modules, kdoctools, - akonadi-search, kbookmarks, kcalutils, kcmutils, kcompletion, kconfig, - kconfigwidgets, kcoreaddons, libkdepim, - kdepim-runtime, kguiaddons, ki18n, kiconthemes, kinit, kio, kldap, - kmail-account-wizard, kmailtransport, knotifications, knotifyconfig, - kontactinterface, kparts, kpty, kservice, ktextwidgets, ktnef, kwallet, - kwidgetsaddons, kwindowsystem, kxmlgui, libgravatar, libksieve, mailcommon, - messagelib, pim-sieve-editor, qtscript, qtwebengine, akonadi, kdepim-addons, - qtkeychain, libsecret +{ mkDerivation +, lib +, akonadi +, akonadi-import-wizard +, akonadi-search +, extra-cmake-modules +, kaddressbook +, kbookmarks +, kcalutils +, kcmutils +, kcompletion +, kconfig +, kconfigwidgets +, kcoreaddons +, kdepim-addons +, kdepim-runtime +, kdepimTeam +, kdoctools +, kguiaddons +, ki18n +, kiconthemes +, kinit +, kio +, kldap +, kleopatra +, kmail-account-wizard +, kmailtransport +, knotifications +, knotifyconfig +, kontactinterface +, kparts +, kpty +, kservice +, ktextwidgets +, ktnef +, kwallet +, kwidgetsaddons +, kwindowsystem +, kxmlgui +, libgravatar +, libkdepim +, libksieve +, libsecret +, mailcommon +, messagelib +, pim-data-exporter +, pim-sieve-editor +, qtkeychain +, qtscript +, qtwebengine }: mkDerivation { @@ -19,13 +58,53 @@ mkDerivation { }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ - akonadi-search kbookmarks kcalutils kcmutils kcompletion kconfig - kconfigwidgets kcoreaddons kguiaddons ki18n - kiconthemes kinit kio kldap kmail-account-wizard kmailtransport libkdepim - knotifications knotifyconfig kontactinterface kparts kpty kservice - ktextwidgets ktnef kwidgetsaddons kwindowsystem kxmlgui libgravatar - libksieve mailcommon messagelib pim-sieve-editor qtscript qtwebengine - kdepim-addons qtkeychain libsecret + akonadi-search + kbookmarks + kcalutils + kcmutils + kcompletion + kconfig + kconfigwidgets + kcoreaddons + kdepim-addons + kguiaddons + ki18n + kiconthemes + kinit + kio + kldap + kmail-account-wizard + kmailtransport + knotifications + knotifyconfig + kontactinterface + kparts + kpty + kservice + ktextwidgets + ktnef + kwidgetsaddons + kwindowsystem + kxmlgui + libgravatar + libkdepim + libksieve + libsecret + mailcommon + messagelib + pim-sieve-editor + qtkeychain + qtscript + qtwebengine + akonadi-import-wizard + kaddressbook + kleopatra + pim-data-exporter ]; + outputs = [ "out" "doc" ]; propagatedUserEnvPkgs = [ kdepim-runtime kwallet akonadi ]; + postFixup = '' + wrapProgram "$out/bin/kmail" \ + --prefix PATH : "${lib.makeBinPath [ akonadi akonadi-import-wizard kaddressbook kleopatra kmail-account-wizard pim-data-exporter ]}" + ''; } diff --git a/third_party/nixpkgs/pkgs/applications/kde/kmix.nix b/third_party/nixpkgs/pkgs/applications/kde/kmix.nix index a3ae46cf13..a34f5a22d0 100644 --- a/third_party/nixpkgs/pkgs/applications/kde/kmix.nix +++ b/third_party/nixpkgs/pkgs/applications/kde/kmix.nix @@ -2,7 +2,7 @@ mkDerivation, lib, extra-cmake-modules, kdoctools, kglobalaccel, kxmlgui, kcoreaddons, - plasma-framework, libpulseaudio, alsaLib, libcanberra_kde + plasma-framework, libpulseaudio, alsa-lib, libcanberra_kde }: mkDerivation { @@ -13,7 +13,7 @@ mkDerivation { }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ - alsaLib kglobalaccel kxmlgui kcoreaddons + alsa-lib kglobalaccel kxmlgui kcoreaddons libcanberra_kde libpulseaudio plasma-framework ]; cmakeFlags = [ "-DKMIX_KF5_BUILD=1" ]; diff --git a/third_party/nixpkgs/pkgs/applications/kde/kwave.nix b/third_party/nixpkgs/pkgs/applications/kde/kwave.nix index 125e79c2c3..43f41c345f 100644 --- a/third_party/nixpkgs/pkgs/applications/kde/kwave.nix +++ b/third_party/nixpkgs/pkgs/applications/kde/kwave.nix @@ -1,5 +1,5 @@ { mkDerivation, lib, extra-cmake-modules, kdoctools, qtmultimedia, kcompletion, kconfig -, kcrash, kiconthemes, kio, audiofile, libsamplerate, alsaLib, libpulseaudio, flac, id3lib +, kcrash, kiconthemes, kio, audiofile, libsamplerate, alsa-lib, libpulseaudio, flac, id3lib , libogg, libmad, libopus, libvorbis, fftw, librsvg, qtbase }: mkDerivation { @@ -17,7 +17,7 @@ mkDerivation { extra-cmake-modules ]; buildInputs = [ - alsaLib + alsa-lib audiofile kcrash kdoctools diff --git a/third_party/nixpkgs/pkgs/applications/misc/1password-gui/default.nix b/third_party/nixpkgs/pkgs/applications/misc/1password-gui/default.nix index 580f6eda87..436e4d7831 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/1password-gui/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/1password-gui/default.nix @@ -2,7 +2,7 @@ , stdenv , fetchurl , makeWrapper -, alsaLib +, alsa-lib , at-spi2-atk , at-spi2-core , atk @@ -47,7 +47,7 @@ stdenv.mkDerivation rec { installPhase = let rpath = lib.makeLibraryPath [ - alsaLib + alsa-lib at-spi2-atk at-spi2-core atk diff --git a/third_party/nixpkgs/pkgs/applications/misc/airtame/default.nix b/third_party/nixpkgs/pkgs/applications/misc/airtame/default.nix index 58fcf4cb10..90373b6b00 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/airtame/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/airtame/default.nix @@ -1,12 +1,12 @@ { stdenv, lib, fetchurl, makeDesktopItem, makeWrapper -, alsaLib, atk, cairo, cups, curl, dbus, expat, ffmpeg_3, fontconfig, freetype +, alsa-lib, atk, cairo, cups, curl, dbus, expat, ffmpeg_3, fontconfig, freetype , gdk-pixbuf, glib, glibc, gnome2, gtk2, libX11, libXScrnSaver, libXcomposite , libXcursor, libXdamage, libXext, libXfixes, libXi, libXrandr, libXrender , libXtst, libopus, libpulseaudio, libxcb, nspr, nss, pango, udev, x264 }: let libPath = lib.makeLibraryPath [ - alsaLib atk cairo cups curl dbus expat ffmpeg_3 fontconfig freetype gdk-pixbuf + alsa-lib atk cairo cups curl dbus expat ffmpeg_3 fontconfig freetype gdk-pixbuf glib glibc gnome2.GConf gtk2 libopus nspr nss pango stdenv.cc.cc udev x264 libX11 libXScrnSaver libXcomposite libXcursor libXdamage libXext libXfixes libXi libXrandr libXrender libXtst libpulseaudio libxcb diff --git a/third_party/nixpkgs/pkgs/applications/misc/anup/default.nix b/third_party/nixpkgs/pkgs/applications/misc/anup/default.nix new file mode 100644 index 0000000000..9c99c84eab --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/anup/default.nix @@ -0,0 +1,27 @@ +{ lib, rustPlatform, fetchFromGitHub, sqlite, xdg-utils}: + +rustPlatform.buildRustPackage rec { + pname = "anup"; + version = "0.4.0"; + + src = fetchFromGitHub { + owner = "Acizza"; + repo = "anup"; + rev = version; + sha256 = "sha256-4pXF4p4K8+YihVB9NdgT6bOidmQEgWXUbcbvgXJ0IDA="; + }; + + buildInputs = [ + sqlite + xdg-utils + ]; + + cargoSha256 = "sha256-1TA2HDHKA3twFtlAWaC2zcRzS8TJwcbBt1OTQ3hC3qM="; + + meta = with lib; { + homepage = "https://github.com/Acizza/anup"; + description = "An anime tracker for AniList featuring a TUI"; + license = licenses.agpl3Only; + maintainers = with maintainers; [ natto1784 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/misc/archivy/default.nix b/third_party/nixpkgs/pkgs/applications/misc/archivy/default.nix index 6af4f67d8c..08d5524fc3 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/archivy/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/archivy/default.nix @@ -21,11 +21,11 @@ buildPythonApplication rec { pname = "archivy"; - version = "1.1.4"; + version = "1.3.1"; src = fetchPypi { inherit pname version; - sha256 = "sha256-oSmwQcKvp9RABmc7aq6fdLOZapMauIi6+7azVTXVb30="; + sha256 = "sha256-g7H22zJOQuxSmoJ3373eRcbderC67vkuiLN1CgaytFM="; }; # Relax some dependencies diff --git a/third_party/nixpkgs/pkgs/applications/misc/audio/sox/default.nix b/third_party/nixpkgs/pkgs/applications/misc/audio/sox/default.nix index 946150d2b8..9baf2d4d2f 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/audio/sox/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/audio/sox/default.nix @@ -1,5 +1,5 @@ { config, lib, stdenv, fetchurl, pkg-config, CoreAudio -, enableAlsa ? true, alsaLib ? null +, enableAlsa ? true, alsa-lib ? null , enableLibao ? true, libao ? null , enableLame ? config.sox.enableLame or false, lame ? null , enableLibmad ? true, libmad ? null @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { patches = [ ./0001-musl-rewind-pipe-workaround.patch ]; buildInputs = - optional (enableAlsa && stdenv.isLinux) alsaLib ++ + optional (enableAlsa && stdenv.isLinux) alsa-lib ++ optional enableLibao libao ++ optional enableLame lame ++ optional enableLibmad libmad ++ diff --git a/third_party/nixpkgs/pkgs/applications/misc/authenticator/default.nix b/third_party/nixpkgs/pkgs/applications/misc/authenticator/default.nix index 46b61720d0..ffa34d041e 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/authenticator/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/authenticator/default.nix @@ -91,6 +91,7 @@ stdenv.mkDerivation rec { ]; meta = with lib; { + broken = true; # https://gitlab.gnome.org/World/Authenticator/-/issues/271 description = "Two-factor authentication code generator for GNOME"; homepage = "https://gitlab.gnome.org/World/Authenticator"; license = licenses.gpl3Plus; diff --git a/third_party/nixpkgs/pkgs/applications/misc/authy/default.nix b/third_party/nixpkgs/pkgs/applications/misc/authy/default.nix index 65200d8517..dc8786dcce 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/authy/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/authy/default.nix @@ -1,4 +1,4 @@ -{ alsaLib, at-spi2-atk, at-spi2-core, atk, autoPatchelfHook, cairo, cups +{ alsa-lib, at-spi2-atk, at-spi2-core, atk, autoPatchelfHook, cairo, cups , dbus, electron_9, expat, fetchurl, gdk-pixbuf, glib, gtk3, lib , libappindicator-gtk3, libdbusmenu-gtk3, libuuid, makeWrapper , nspr, nss, pango, squashfsTools, stdenv, systemd, xorg @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { rev = "5"; buildInputs = [ - alsaLib + alsa-lib at-spi2-atk at-spi2-core atk diff --git a/third_party/nixpkgs/pkgs/applications/misc/base16-universal-manager/default.nix b/third_party/nixpkgs/pkgs/applications/misc/base16-universal-manager/default.nix new file mode 100644 index 0000000000..3d43a28709 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/base16-universal-manager/default.nix @@ -0,0 +1,22 @@ +{ buildGoModule, fetchFromGitHub, lib }: + +buildGoModule rec { + pname = "base16-universal-manager"; + version = "1.0"; + + src = fetchFromGitHub { + owner = "pinpox"; + repo = "base16-universal-manager"; + rev = "v${version}"; + sha256 = "11kal7x0lajzydbc2cvbsix9ympinsiqzfib7dg4b3xprqkyb9zl"; + }; + + vendorSha256 = "19rba689319w3wf0b10yafydyz01kqg8b051vnijcyjyk0khwvsk"; + + meta = with lib; { + description = "A universal manager to set base16 themes for any supported application"; + homepage = "https://github.com/pinpox/base16-universal-manager"; + license = licenses.mit; + maintainers = with maintainers; [ jo1gi ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/misc/bemenu/default.nix b/third_party/nixpkgs/pkgs/applications/misc/bemenu/default.nix index eaad132de9..371bb3a3ef 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/bemenu/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/bemenu/default.nix @@ -11,13 +11,13 @@ assert x11Support -> xorg != null; stdenv.mkDerivation rec { pname = "bemenu"; - version = "0.6.1"; + version = "0.6.2"; src = fetchFromGitHub { owner = "Cloudef"; repo = pname; rev = version; - sha256 = "sha256-UdsfIXlKfXmsrFwrerX1wfne4mdtd69WXnXu3EmxCBY="; + sha256 = "sha256-2xmi/Mh5iU50yc2R1x1yzP8Xaz+mUgLnH73tAeLwxI8="; }; nativeBuildInputs = [ pkg-config pcre ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/blender/default.nix b/third_party/nixpkgs/pkgs/applications/misc/blender/default.nix index cf5ede1c7f..305ab89171 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/blender/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/blender/default.nix @@ -12,7 +12,7 @@ , pugixml, llvmPackages, SDL, Cocoa, CoreGraphics, ForceFeedback, OpenAL, OpenGL , potrace , openxr-loader -, embree, gmp +, embree, gmp, libharu }: with lib; @@ -48,6 +48,7 @@ stdenv.mkDerivation rec { gmp pugixml potrace + libharu ] ++ (if (!stdenv.isDarwin) then [ libXi libX11 libXext libXrender diff --git a/third_party/nixpkgs/pkgs/applications/misc/calibre/default.nix b/third_party/nixpkgs/pkgs/applications/misc/calibre/default.nix index 40951d5f2a..0ee374ac69 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/calibre/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/calibre/default.nix @@ -41,7 +41,7 @@ mkDerivation rec { ++ lib.optional (!unrarSupport) ./dont_build_unrar_plugin.patch; prePatch = '' - sed -i "s@\[tool.sip.project\]@[tool.sip.project]\nsip-include-dirs = [\"${python3Packages.pyqt5}/share/sip/PyQt5\"]@g" \ + sed -i "s@\[tool.sip.project\]@[tool.sip.project]\nsip-include-dirs = [\"${python3Packages.pyqt5}/${python3Packages.python.sitePackages}/PyQt5/bindings\"]@g" \ setup/build.py sed -i "s/\[tool.sip.bindings.pictureflow\]/[tool.sip.bindings.pictureflow]\ntags = [\"${python3Packages.sip.platform_tag}\"]/g" \ setup/build.py diff --git a/third_party/nixpkgs/pkgs/applications/misc/cheat/default.nix b/third_party/nixpkgs/pkgs/applications/misc/cheat/default.nix index 9c8f060f16..f7a56a48fc 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/cheat/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/cheat/default.nix @@ -3,13 +3,13 @@ buildGoModule rec { pname = "cheat"; - version = "4.2.1"; + version = "4.2.2"; src = fetchFromGitHub { owner = "cheat"; repo = "cheat"; rev = version; - sha256 = "sha256-wH0MTTwUmi/QZXo3vWgRYmlPxMxgfhghrTIZAwdVjQ0="; + sha256 = "sha256-YKGCZm0BaFLi+kujl04B4IU1qay15XNfvelxfUkCP8o="; }; subPackages = [ "cmd/cheat" ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/cherrytree/default.nix b/third_party/nixpkgs/pkgs/applications/misc/cherrytree/default.nix index 0ce89afa6c..585f621786 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/cherrytree/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/cherrytree/default.nix @@ -1,24 +1,52 @@ -{ lib, fetchFromGitHub, python2Packages, gettext }: +{ stdenv +, lib +, fetchFromGitHub +, cmake +, pkg-config +, python3 +, wrapGAppsHook +, gtkmm3 +, gtksourceview +, gtksourceviewmm +, gspell +, libxmlxx +, sqlite +, curl +, libuchardet +, fmt +, spdlog +}: -python2Packages.buildPythonApplication rec { +stdenv.mkDerivation rec { pname = "cherrytree"; - version = "0.39.4"; + version = "0.99.37"; src = fetchFromGitHub { owner = "giuspen"; repo = "cherrytree"; rev = version; - sha256 = "1wycgn1f3b858qb6kn2bsaabak8n52qkpd24w54xz6fjizlnw7x0"; - + sha256 = "1a2scwjrjijxwyfpqih23zzay3yqhyzpxnp66388fcir1cmp8zih"; }; - nativeBuildInputs = [ gettext ]; + nativeBuildInputs = [ + cmake + pkg-config + python3 + wrapGAppsHook + ]; - propagatedBuildInputs = with python2Packages; [ pygtk dbus-python pygtksourceview ]; - - patches = [ ./subprocess.patch ]; - - doCheck = false; + buildInputs = [ + gtkmm3 + gtksourceview + gtksourceviewmm + gspell + libxmlxx + sqlite + curl + libuchardet + fmt + spdlog + ]; meta = with lib; { description = "An hierarchical note taking application"; @@ -31,8 +59,9 @@ python2Packages.buildPythonApplication rec { you have scattered around your hard drive can be conveniently placed into a Cherrytree document where you can easily find it. ''; - homepage = "http://www.giuspen.com/cherrytree"; - license = licenses.gpl3; + homepage = "https://www.giuspen.com/cherrytree"; + changelog = "https://raw.githubusercontent.com/giuspen/cherrytree/${version}/changelog.txt"; + license = licenses.gpl3Plus; maintainers = with maintainers; [ ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/misc/cherrytree/subprocess.patch b/third_party/nixpkgs/pkgs/applications/misc/cherrytree/subprocess.patch deleted file mode 100644 index 1f80cde03b..0000000000 --- a/third_party/nixpkgs/pkgs/applications/misc/cherrytree/subprocess.patch +++ /dev/null @@ -1,14 +0,0 @@ -diff -Naur cherrytree-0.37.1-orig/setup.py cherrytree-0.37.1/setup.py ---- cherrytree-0.37.1-orig/setup.py 2016-01-08 20:50:50.000000000 +0100 -+++ cherrytree-0.37.1/setup.py 2016-07-05 20:30:27.768178682 +0200 -@@ -205,4 +205,9 @@ - }, - distclass=CherryTreeDist - ) -- subprocess.call("update-desktop-database") -+ try: -+ subprocess.check_call(['update-desktop-database']) -+ except subprocess.CalledProcessError: -+ pass # handle errors in the called executable -+ except OSError: -+ pass # executable not found diff --git a/third_party/nixpkgs/pkgs/applications/misc/cobalt/default.nix b/third_party/nixpkgs/pkgs/applications/misc/cobalt/default.nix new file mode 100644 index 0000000000..a9ccc6a8f8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/cobalt/default.nix @@ -0,0 +1,22 @@ +{ lib, stdenv, fetchFromGitHub, rustPlatform }: + +rustPlatform.buildRustPackage rec { + pname = "cobalt"; + version = "0.16.5"; + + src = fetchFromGitHub { + owner = "cobalt-org"; + repo = "cobalt.rs"; + rev = "v${version}"; + sha256 = "wSvjPifnA8oc0vVmHBMdsMKzX7Gg6TdbPzIXl/SHqn8="; + }; + + cargoSha256 = "27LcoGBI4elt80uQkTwvToOyEmd2+/3ma5Y32OFrJaw="; + + meta = with lib; { + description = "Static site generator written in Rust"; + homepage = "https://github.com/cobalt-org/cobalt.rs/"; + license = licenses.mit; + maintainers = with maintainers; [ ethancedwards8 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/misc/dbeaver/default.nix b/third_party/nixpkgs/pkgs/applications/misc/dbeaver/default.nix index 8de49c5f95..b48640c1d2 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/dbeaver/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/dbeaver/default.nix @@ -18,13 +18,13 @@ stdenv.mkDerivation rec { pname = "dbeaver"; - version = "21.1.0"; # When updating also update fetchedMavenDeps.sha256 + version = "21.1.1"; # When updating also update fetchedMavenDeps.sha256 src = fetchFromGitHub { owner = "dbeaver"; repo = "dbeaver"; rev = version; - sha256 = "sha256-MHfW6gZFB2osE+8Ek7I40fg2cdowph3hvKqkjG7+rY4="; + sha256 = "sha256-enUwX+BxgPy4c1Vwo1+vN3lFYz4LgofgKvZOYuz/050="; }; fetchedMavenDeps = stdenv.mkDerivation { @@ -50,7 +50,7 @@ stdenv.mkDerivation rec { dontFixup = true; outputHashAlgo = "sha256"; outputHashMode = "recursive"; - outputHash = "sha256-FdWQ+2U5bIXSASm3SaLjyQlaRc1AkYPpFJSP4PnCWJw="; + outputHash = "sha256-vNC+LmGEepZCepPodY3c783moReppqNw32d7AUuvBZc="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/misc/devilspie2/default.nix b/third_party/nixpkgs/pkgs/applications/misc/devilspie2/default.nix index 2d3c28b2d7..b9d8b0f979 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/devilspie2/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/devilspie2/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, intltool, pkg-config, glib, gtk, lua, libwnck3 }: +{ lib, stdenv, fetchurl, intltool, pkg-config, glib, gtk, lua, libwnck }: stdenv.mkDerivation rec { pname = "devilspie2"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ intltool pkg-config ]; - buildInputs = [ glib gtk lua libwnck3 ]; + buildInputs = [ glib gtk lua libwnck ]; installPhase = '' mkdir -p $out/bin $out/share/man/man1 diff --git a/third_party/nixpkgs/pkgs/applications/misc/dockbarx/default.nix b/third_party/nixpkgs/pkgs/applications/misc/dockbarx/default.nix index cac6c363c3..9471751844 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/dockbarx/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/dockbarx/default.nix @@ -4,7 +4,7 @@ , gobject-introspection , gtk3 , keybinder3 -, libwnck3 +, libwnck , python3Packages , wrapGAppsHook }: @@ -31,7 +31,7 @@ python3Packages.buildPythonApplication rec { buildInputs = [ gobject-introspection gtk3 - libwnck3 + libwnck keybinder3 ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/electrum/default.nix b/third_party/nixpkgs/pkgs/applications/misc/electrum/default.nix index 676efb2aa0..4197c1af04 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/electrum/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/electrum/default.nix @@ -20,7 +20,7 @@ }: let - version = "4.1.2"; + version = "4.1.3"; libsecp256k1_name = if stdenv.isLinux then "libsecp256k1.so.0" @@ -36,7 +36,7 @@ let owner = "spesmilo"; repo = "electrum"; rev = version; - sha256 = "0zvv8nmjzw5pchykz5p28483nby4lp4ah7iqr08pv36gy89l51v5"; + sha256 = "1nkcybalkfna9zn33dxm13ic3brj50cfzwspjl349rgyar07j781"; extraPostFetch = '' mv $out ./all @@ -51,7 +51,7 @@ python3.pkgs.buildPythonApplication { src = fetchurl { url = "https://download.electrum.org/${version}/Electrum-${version}.tar.gz"; - sha256 = "05m6vbd4sfjk536kwa5wa3kv21jxxqnglx0ddvnmxfhf98371bhk"; + sha256 = "1mlwpmgfm3n45agx65jzsi4dr8nxf95x7nl01jnwa3qk5krrv4cf"; }; postUnpack = '' diff --git a/third_party/nixpkgs/pkgs/applications/misc/free42/default.nix b/third_party/nixpkgs/pkgs/applications/misc/free42/default.nix index dab8ccb29b..feadf15909 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/free42/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/free42/default.nix @@ -5,22 +5,22 @@ , copyDesktopItems , pkg-config , gtk3 -, alsaLib +, alsa-lib }: stdenv.mkDerivation rec { pname = "free42"; - version = "3.0.3"; + version = "3.0.4"; src = fetchFromGitHub { owner = "thomasokken"; repo = pname; rev = "v${version}"; - sha256 = "sha256-2TOYvZBI2EW9xjbjA4Bh+TgjbyEXRzOByalLYBW8Ba8="; + sha256 = "sha256-ZoW5gBAUp/5U8Is3Nhx+SHY4d0F3PGOS1/WOokKRnCU="; }; nativeBuildInputs = [ copyDesktopItems pkg-config ]; - buildInputs = [ gtk3 alsaLib ]; + buildInputs = [ gtk3 alsa-lib ]; postPatch = '' sed -i -e "s|/bin/ls|ls|" gtk/Makefile diff --git a/third_party/nixpkgs/pkgs/applications/misc/fuzzel/default.nix b/third_party/nixpkgs/pkgs/applications/misc/fuzzel/default.nix index 71c494d311..1e51f69f1c 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/fuzzel/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/fuzzel/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "fuzzel"; - version = "1.5.4"; + version = "1.6.0"; src = fetchzip { url = "https://codeberg.org/dnkl/fuzzel/archive/${version}.tar.gz"; - sha256 = "sha256-Zg9KrRf2ntg2FU6lhllt/Fd63KJak6zB7hu4ujj/9AI="; + sha256 = "sha256-iTpUWvQszDtNc1gDqkPbhvgUVNWydpivhnOCHMJVtSw="; }; nativeBuildInputs = [ pkg-config meson ninja scdoc git ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/gallery-dl/default.nix b/third_party/nixpkgs/pkgs/applications/misc/gallery-dl/default.nix index 854b8a5f9b..5cfca0b4a2 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/gallery-dl/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/gallery-dl/default.nix @@ -2,11 +2,11 @@ buildPythonApplication rec { pname = "gallery_dl"; - version = "1.17.4"; + version = "1.18.0"; src = fetchPypi { inherit pname version; - sha256 = "4df80fd923b03b2413a3d1c50e32c3006d100ed5acc1400ace69d8dc2162d293"; + sha256 = "a0658cd2b629ec5b24b9a893056ce7224088ee5eb760f30642131a8df0279131"; }; propagatedBuildInputs = [ requests ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/go-jira/default.nix b/third_party/nixpkgs/pkgs/applications/misc/go-jira/default.nix index 2f2a0a2212..4a368e92ec 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/go-jira/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/go-jira/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "go-jira"; - version = "1.0.27"; + version = "1.0.28"; src = fetchFromGitHub { rev = "v${version}"; owner = "go-jira"; repo = "jira"; - sha256 = "1sw56aqghfxh88mfchf0nvqld0x7w22jfwx13pd24slxv1iag1nb"; + sha256 = "sha256-h/x77xGqdOxPBxdchElZU9GFgjnNo89o9gx4fYM5dME="; }; - vendorSha256 = "0d64gkkzfm6hbgqaibj26fpaqnjs50p1675ycrshdhn6blb5mbxg"; + vendorSha256 = "sha256-r69aFl3GwgZ1Zr4cEy4oWlqsrjNCrqjwW9BU9+d8xDQ="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/applications/misc/gxkb/default.nix b/third_party/nixpkgs/pkgs/applications/misc/gxkb/default.nix index 7f2b93f149..16268bc76c 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/gxkb/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/gxkb/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, autoreconfHook, pkg-config, gtk3, libwnck3, libxklavier +{ lib, stdenv, fetchFromGitHub, autoreconfHook, pkg-config, gtk3, libwnck, libxklavier , appindicatorSupport ? true, libayatana-appindicator-gtk3 }: @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config autoreconfHook ]; - buildInputs = [ gtk3 libwnck3 libxklavier ] ++ lib.optional appindicatorSupport libayatana-appindicator-gtk3; + buildInputs = [ gtk3 libwnck libxklavier ] ++ lib.optional appindicatorSupport libayatana-appindicator-gtk3; configureFlags = lib.optional appindicatorSupport "--enable-appindicator=yes"; outputs = [ "out" "man" ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/houdini/runtime.nix b/third_party/nixpkgs/pkgs/applications/misc/houdini/runtime.nix index b1c7949d25..c9be607b36 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/houdini/runtime.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/houdini/runtime.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, requireFile, zlib, libpng, libSM, libICE, fontconfig, xorg, libGLU, libGL, alsaLib, dbus, xkeyboardconfig, bc, addOpenGLRunpath }: +{ lib, stdenv, requireFile, zlib, libpng, libSM, libICE, fontconfig, xorg, libGLU, libGL, alsa-lib, dbus, xkeyboardconfig, bc, addOpenGLRunpath }: let ld_library_path = builtins.concatStringsSep ":" [ @@ -17,7 +17,7 @@ let xorg.libXcomposite xorg.libXdamage xorg.libXtst - alsaLib + alsa-lib fontconfig libSM libICE diff --git a/third_party/nixpkgs/pkgs/applications/misc/hubstaff/default.nix b/third_party/nixpkgs/pkgs/applications/misc/hubstaff/default.nix index f291ab898e..1bc22b6613 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/hubstaff/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/hubstaff/default.nix @@ -1,13 +1,12 @@ { lib, stdenv, fetchurl, unzip, makeWrapper, libX11, zlib, libSM, libICE , libXext , freetype, libXrender, fontconfig, libXft, libXinerama , libXfixes, libXScrnSaver, libnotify, glib , gtk3, libappindicator-gtk3 -, curl }: +, curl, writeShellScript, common-updater-scripts }: let - - data = builtins.fromJSON (builtins.readFile ./revision.json); - - inherit (data) version url sha256; + url = "https://hubstaff-production.s3.amazonaws.com/downloads/HubstaffClient/Builds/Release/1.5.19-9e79d1da/Hubstaff-1.5.19-9e79d1da.sh"; + version = "1.5.19-9e79d1da"; + sha256 = "1l4sq8cblpl1kclkx5pgy0ldfmqa3n8bvdl5qml0n78r0lpk382j"; rpath = lib.makeLibraryPath [ libX11 zlib libSM libICE libXext freetype libXrender fontconfig libXft @@ -56,6 +55,18 @@ stdenv.mkDerivation { ln -s $opt/data/resources $opt/x86_64/resources ''; + updateScript = writeShellScript "hubstaff-updater" '' + set -eu -o pipefail + + installation_script_url=$(curl --fail --head --location --silent --output /dev/null --write-out %{url_effective} https://app.hubstaff.com/download/linux) + + version=$(echo "$installation_script_url" | sed -r 's/^https:\/\/hubstaff\-production\.s3\.amazonaws\.com\/downloads\/HubstaffClient\/Builds\/Release\/([^\/]+)\/Hubstaff.+$/\1/') + + sha256=$(nix-prefetch-url "$installation_script_url") + + ${common-updater-scripts}/bin/update-source-version hubstaff "$version" "$sha256" "$installation_script_url" + ''; + meta = with lib; { description = "Time tracking software"; homepage = "https://hubstaff.com/"; diff --git a/third_party/nixpkgs/pkgs/applications/misc/hubstaff/revision.json b/third_party/nixpkgs/pkgs/applications/misc/hubstaff/revision.json deleted file mode 100644 index 9b0ffe67f0..0000000000 --- a/third_party/nixpkgs/pkgs/applications/misc/hubstaff/revision.json +++ /dev/null @@ -1,5 +0,0 @@ -{ - "url": "https://hubstaff-production.s3.amazonaws.com/downloads/HubstaffClient/Builds/Release/1.5.15-28673d1c/Hubstaff-1.5.15-28673d1c.sh", - "version": "1.5.15-28673d1c", - "sha256": "0ging41l3a3sdj6bggh913h71gqmb8l3rplp4civpgclnfzv7fg2" -} diff --git a/third_party/nixpkgs/pkgs/applications/misc/hubstaff/update.sh b/third_party/nixpkgs/pkgs/applications/misc/hubstaff/update.sh deleted file mode 100755 index c4c1caf55d..0000000000 --- a/third_party/nixpkgs/pkgs/applications/misc/hubstaff/update.sh +++ /dev/null @@ -1,18 +0,0 @@ -#!/usr/bin/env nix-shell -#!nix-shell -i bash -p nix-prefetch-git curl - -SCRIPT_DIR=$(dirname "$(readlink -f "$BASH_SOURCE")") - -installation_script_url=$(curl --fail --head --location --silent --output /dev/null --write-out %{url_effective} https://app.hubstaff.com/download/linux) - -version=$(echo "$installation_script_url" | sed -r 's/^https:\/\/hubstaff\-production\.s3\.amazonaws\.com\/downloads\/HubstaffClient\/Builds\/Release\/([^\/]+)\/Hubstaff.+$/\1/') - -sha256=$(nix-prefetch-url "$installation_script_url") - -cat < $SCRIPT_DIR/revision.json -{ - "url": "$installation_script_url", - "version": "$version", - "sha256": "$sha256" -} -EOT diff --git a/third_party/nixpkgs/pkgs/applications/misc/hugo/default.nix b/third_party/nixpkgs/pkgs/applications/misc/hugo/default.nix index b8ea6b83b9..bf5fe070cb 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/hugo/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/hugo/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "hugo"; - version = "0.83.1"; + version = "0.84.1"; src = fetchFromGitHub { owner = "gohugoio"; repo = pname; rev = "v${version}"; - sha256 = "sha256-c9T3a6J78uLumBTy/DgE4gbxCmEXVGKd9JyF9dyrL6g="; + sha256 = "sha256-ULZa0tepq00v2VHDR3+aYYvRfbxYKcjcltRgRmbVmRA="; }; - vendorSha256 = "sha256-ddCyMmZ5RIZWzT2RYNnSW795oR7PIRudl3QTjsXtBGk="; + vendorSha256 = "sha256-jY/g92ON5OxjuZzPHJNduXYMgPU8/0ioAYvp4iqjGnU="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/applications/misc/joplin-desktop/default.nix b/third_party/nixpkgs/pkgs/applications/misc/joplin-desktop/default.nix index 9c559a364e..2d9a2ca590 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/joplin-desktop/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/joplin-desktop/default.nix @@ -2,7 +2,7 @@ let pname = "joplin-desktop"; - version = "1.7.11"; + version = "1.8.5"; name = "${pname}-${version}"; inherit (stdenv.hostPlatform) system; @@ -16,8 +16,8 @@ let src = fetchurl { url = "https://github.com/laurent22/joplin/releases/download/v${version}/Joplin-${version}.${suffix}"; sha256 = { - x86_64-linux = "11vjipvhfvf6wxldcg743anma005j8dbbngqk6sq9hlf677ahxii"; - x86_64-darwin = "1l7m86jlf1m066n6rwmh5fkpx2pj3wj5h9ncxdd24v0zll6ki8vs"; + x86_64-linux = "11csbr72i5kac2bk7wpa877lay2z1n58s0yildkfnjy552ihdxny"; + x86_64-darwin = "1n0ni3ixml99ag83bcn5wg6f0kldjhwkkddd9km37ykr8vxxl952"; }.${system} or throwSystem; }; diff --git a/third_party/nixpkgs/pkgs/applications/misc/jotta-cli/default.nix b/third_party/nixpkgs/pkgs/applications/misc/jotta-cli/default.nix index b34661e6eb..08ca656301 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/jotta-cli/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/jotta-cli/default.nix @@ -5,10 +5,10 @@ let in stdenv.mkDerivation rec { pname = "jotta-cli"; - version = "0.9.39536"; + version = "0.11.44593"; src = fetchzip { url = "https://repo.jotta.us/archives/linux/${arch}/jotta-cli-${version}_linux_${arch}.tar.gz"; - sha256 = "sha256-JZtc6Si3ZQoRG3q+ctzPPQm7WbMYRailIuq/Y5Avd2s="; + sha256 = "1f06zmcpvm0f3phwc43ai6v4ykhkrd4f3br2j89nx9bfmj6ss2ic"; stripRoot = false; }; @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { postFixup = '' patchelf --set-interpreter $(cat $NIX_CC/nix-support/dynamic-linker) $out/bin/jotta-cli patchelf --set-interpreter $(cat $NIX_CC/nix-support/dynamic-linker) $out/bin/jottad - $out/bin/jotta-cli completion > $out/share/bash-completion/completions/jotta-cli.bash + $out/bin/jotta-cli completion bash > $out/share/bash-completion/completions/jotta-cli.bash ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/misc/jquake/default.nix b/third_party/nixpkgs/pkgs/applications/misc/jquake/default.nix new file mode 100644 index 0000000000..2a3f1aec41 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/jquake/default.nix @@ -0,0 +1,67 @@ +{ lib, stdenv, fetchurl, copyDesktopItems, makeDesktopItem, unzip, jre8 +, logOutput ? false +}: + +stdenv.mkDerivation rec { + pname = "jquake"; + version = "1.6.1"; + + src = fetchurl { + url = "https://fleneindre.github.io/downloads/JQuake_${version}_linux.zip"; + sha256 = "0nw6xjc3i1b8rk15arc5d0ji2bycc40rz044qd03vzxvh0h8yvgl"; + }; + + nativeBuildInputs = [ unzip copyDesktopItems ]; + + sourceRoot = "."; + + postPatch = '' + # JQuake emits a lot of debug-like messages on stdout. Either drop the output + # stream entirely or log them at 'user.debug' level. + sed -i "/^java/ s/$/ ${if logOutput then "| logger -p user.debug" else "> \\/dev\\/null"}/" JQuake.sh + + # By default, an 'errors.log' file is created in the current directory. + # cd into a temporary directory and let it be created there. + substituteInPlace JQuake.sh \ + --replace "java -jar " "exec ${jre8.outPath}/bin/java -jar $out/lib/" \ + --replace "[JAR FOLDER]" "\$(mktemp -p /tmp -d jquake-errlog-XXX)" + ''; + + dontConfigure = true; + dontBuild = true; + + installPhase = '' + runHook preInstall + + chmod +x JQuake.sh + + mkdir -p $out/{bin,lib} + mv JQuake.sh $out/bin/JQuake + mv {JQuake.jar,JQuake_lib} $out/lib + mv sounds $out/lib + + mkdir -p $out/share/licenses/jquake + mv LICENSE* $out/share/licenses/jquake + + runHook postInstall + ''; + + desktopItems = [ + (makeDesktopItem { + name = "JQuake"; + desktopName = "JQuake"; + exec = "JQuake"; + comment = "Real-time earthquake map of Japan"; + }) + ]; + + meta = with lib; { + description = "Real-time earthquake map of Japan"; + homepage = "http://jquake.net"; + downloadPage = "https://jquake.net/?down"; + changelog = "https://jquake.net/?docu"; + maintainers = with maintainers; [ nessdoor ]; + license = licenses.unfree; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/misc/kanboard/default.nix b/third_party/nixpkgs/pkgs/applications/misc/kanboard/default.nix index 6dd407ab55..4b13eaa1e7 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/kanboard/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/kanboard/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "kanboard"; - version = "1.2.19"; + version = "1.2.20"; src = fetchFromGitHub { owner = "kanboard"; repo = "kanboard"; rev = "v${version}"; - sha256 = "sha256-48U3eRg6obRjgK06SKN2g1+0wocqm2aGyXO2yZw5fs8="; + sha256 = "sha256-IB+GhUZvjngjf1UHKc7B/PkZHVXKYUTk6CVA5XSiF5Y="; }; dontBuild = true; diff --git a/third_party/nixpkgs/pkgs/applications/misc/keepassx/community.nix b/third_party/nixpkgs/pkgs/applications/misc/keepassx/community.nix index fe09345349..b4beab05ac 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/keepassx/community.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/keepassx/community.nix @@ -1,8 +1,6 @@ { lib, stdenv , fetchFromGitHub -, fetchpatch , cmake -, makeWrapper , qttools , darwin @@ -43,13 +41,13 @@ with lib; stdenv.mkDerivation rec { pname = "keepassxc"; - version = "2.6.4"; + version = "2.6.6"; src = fetchFromGitHub { owner = "keepassxreboot"; repo = "keepassxc"; rev = version; - sha256 = "02ajfkw818cmalvkl0kqvza85rgdgs59kw2v7b3c4v8kv00c41j3"; + sha256 = "15rm3avdmc2x2n92zq6w1zbcranak4j6dds2sxmgdqi1ffc0a3ci"; }; NIX_CFLAGS_COMPILE = optionalString stdenv.cc.isClang [ @@ -92,10 +90,9 @@ stdenv.mkDerivation rec { runHook postCheck ''; - nativeBuildInputs = [ cmake wrapQtAppsHook qttools pkg-config ]; + nativeBuildInputs = [ asciidoctor cmake wrapQtAppsHook qttools pkg-config ]; buildInputs = [ - asciidoctor curl glibcLocales libXi diff --git a/third_party/nixpkgs/pkgs/applications/misc/kile-wl/default.nix b/third_party/nixpkgs/pkgs/applications/misc/kile-wl/default.nix index 479c5bf1d8..a9e44964d4 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/kile-wl/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/kile-wl/default.nix @@ -1,20 +1,28 @@ -{ lib, fetchFromGitLab, rustPlatform }: +{ lib, fetchFromGitLab, unstableGitUpdater, rustPlatform, scdoc }: rustPlatform.buildRustPackage rec { pname = "kile-wl"; - version = "unstable-2021-04-22"; + version = "unstable-2021-06-01"; src = fetchFromGitLab { owner = "snakedye"; repo = "kile"; - rev = "b97b9f1e5b33862b33918efaf23fd1c0c5d7058a"; - sha256 = "sha256-97qJd3o8nJt8IX5tyGWtAmJsIv5Gcw1xoBFwxAqk7I8="; + rev = "28235f85ece148e7010c5d6ac088688100a18e04"; + sha256 = "sha256-UTfYYywOwa728zLkLWQaz6wN0TM/4OzbHQGedjdHGSI="; }; - # Upstream has Cargo.lock gitignored - cargoPatches = [ ./update-Cargo-lock.diff ]; + passthru.updateScript = unstableGitUpdater { + url = "https://gitlab.com/snakedye/kile.git"; + }; - cargoSha256 = "sha256-TEgIiw/XTDUOe9K7agHWI86f88w+eDJ332V0CgNHtfo="; + cargoSha256 = "sha256-dzOkiZYHQu5AuwkbWEtIJAyZ1TNIGYkfz+S3q6K384w="; + + nativeBuildInputs = [ scdoc ]; + + postInstall = '' + mkdir -p $out/share/man + scdoc < doc/kile.1.scd > $out/share/man/kile.1 + ''; meta = with lib; { description = "A tiling layout generator for river"; diff --git a/third_party/nixpkgs/pkgs/applications/misc/kile-wl/update-Cargo-lock.diff b/third_party/nixpkgs/pkgs/applications/misc/kile-wl/update-Cargo-lock.diff deleted file mode 100644 index 8fc9fc555e..0000000000 --- a/third_party/nixpkgs/pkgs/applications/misc/kile-wl/update-Cargo-lock.diff +++ /dev/null @@ -1,153 +0,0 @@ -diff --git a/Cargo.lock b/Cargo.lock -new file mode 100644 -index 0000000..05cf87b ---- /dev/null -+++ b/Cargo.lock -@@ -0,0 +1,147 @@ -+# This file is automatically @generated by Cargo. -+# It is not intended for manual editing. -+[[package]] -+name = "bitflags" -+version = "1.2.1" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "cf1de2fe8c75bc145a2f577add951f8134889b4795d47466a54a5c846d691693" -+ -+[[package]] -+name = "cc" -+version = "1.0.67" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "e3c69b077ad434294d3ce9f1f6143a2a4b89a8a2d54ef813d85003a4fd1137fd" -+ -+[[package]] -+name = "cfg-if" -+version = "1.0.0" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd" -+ -+[[package]] -+name = "downcast-rs" -+version = "1.2.0" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "9ea835d29036a4087793836fa931b08837ad5e957da9e23886b29586fb9b6650" -+ -+[[package]] -+name = "kile" -+version = "0.1.0" -+dependencies = [ -+ "wayland-client", -+ "wayland-commons", -+ "wayland-scanner", -+] -+ -+[[package]] -+name = "libc" -+version = "0.2.93" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "9385f66bf6105b241aa65a61cb923ef20efc665cb9f9bb50ac2f0c4b7f378d41" -+ -+[[package]] -+name = "nix" -+version = "0.20.0" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "fa9b4819da1bc61c0ea48b63b7bc8604064dd43013e7cc325df098d49cd7c18a" -+dependencies = [ -+ "bitflags", -+ "cc", -+ "cfg-if", -+ "libc", -+] -+ -+[[package]] -+name = "once_cell" -+version = "1.7.2" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "af8b08b04175473088b46763e51ee54da5f9a164bc162f615b91bc179dbf15a3" -+ -+[[package]] -+name = "pkg-config" -+version = "0.3.19" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "3831453b3449ceb48b6d9c7ad7c96d5ea673e9b470a1dc578c2ce6521230884c" -+ -+[[package]] -+name = "proc-macro2" -+version = "1.0.26" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "a152013215dca273577e18d2bf00fa862b89b24169fb78c4c95aeb07992c9cec" -+dependencies = [ -+ "unicode-xid", -+] -+ -+[[package]] -+name = "quote" -+version = "1.0.9" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "c3d0b9745dc2debf507c8422de05d7226cc1f0644216dfdfead988f9b1ab32a7" -+dependencies = [ -+ "proc-macro2", -+] -+ -+[[package]] -+name = "smallvec" -+version = "1.6.1" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "fe0f37c9e8f3c5a4a66ad655a93c74daac4ad00c441533bf5c6e7990bb42604e" -+ -+[[package]] -+name = "unicode-xid" -+version = "0.2.1" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "f7fe0bb3479651439c9112f72b6c505038574c9fbb575ed1bf3b797fa39dd564" -+ -+[[package]] -+name = "wayland-client" -+version = "0.28.5" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "06ca44d86554b85cf449f1557edc6cc7da935cc748c8e4bf1c507cbd43bae02c" -+dependencies = [ -+ "bitflags", -+ "downcast-rs", -+ "libc", -+ "nix", -+ "wayland-commons", -+ "wayland-scanner", -+ "wayland-sys", -+] -+ -+[[package]] -+name = "wayland-commons" -+version = "0.28.5" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "8bd75ae380325dbcff2707f0cd9869827ea1d2d6d534cff076858d3f0460fd5a" -+dependencies = [ -+ "nix", -+ "once_cell", -+ "smallvec", -+ "wayland-sys", -+] -+ -+[[package]] -+name = "wayland-scanner" -+version = "0.28.5" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "389d680d7bd67512dc9c37f39560224327038deb0f0e8d33f870900441b68720" -+dependencies = [ -+ "proc-macro2", -+ "quote", -+ "xml-rs", -+] -+ -+[[package]] -+name = "wayland-sys" -+version = "0.28.5" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "2907bd297eef464a95ba9349ea771611771aa285b932526c633dc94d5400a8e2" -+dependencies = [ -+ "pkg-config", -+] -+ -+[[package]] -+name = "xml-rs" -+version = "0.8.3" -+source = "registry+https://github.com/rust-lang/crates.io-index" -+checksum = "b07db065a5cf61a7e4ba64f29e67db906fb1787316516c4e6e5ff0fea1efcd8a" diff --git a/third_party/nixpkgs/pkgs/applications/misc/koreader/default.nix b/third_party/nixpkgs/pkgs/applications/misc/koreader/default.nix index eadd5cae50..249569ffba 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/koreader/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/koreader/default.nix @@ -2,10 +2,12 @@ , fetchurl , makeWrapper , dpkg -, luajit -, gtk3-x11 -, SDL2 , glib +, gnutar +, gtk3-x11 +, luajit +, sdcv +, SDL2 , noto-fonts , nerdfonts }: let font-droid = nerdfonts.override { fonts = [ "DroidSansMono" ]; }; @@ -21,7 +23,14 @@ in stdenv.mkDerivation rec { sourceRoot = "."; nativeBuildInputs = [ makeWrapper dpkg ]; - buildInputs = [ luajit gtk3-x11 SDL2 glib ]; + buildInputs = [ + glib + gnutar + gtk3-x11 + luajit + sdcv + SDL2 + ]; unpackCmd = "dpkg-deb -x ${src} ."; dontConfigure = true; @@ -30,7 +39,9 @@ in stdenv.mkDerivation rec { installPhase = '' mkdir -p $out cp -R usr/* $out/ - cp ${luajit}/bin/luajit $out/lib/koreader/luajit + ln -sf ${luajit}/bin/luajit $out/lib/koreader/luajit + ln -sf ${sdcv}/bin/sdcv $out/lib/koreader/sdcv + ln -sf ${gnutar}/bin/tar $out/lib/koreader/tar find $out -xtype l -delete for i in ${noto-fonts}/share/fonts/truetype/noto/*; do ln -s "$i" $out/lib/koreader/fonts/noto/ diff --git a/third_party/nixpkgs/pkgs/applications/misc/kupfer/default.nix b/third_party/nixpkgs/pkgs/applications/misc/kupfer/default.nix index 07ff7c17f6..47e310fb76 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/kupfer/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/kupfer/default.nix @@ -5,7 +5,7 @@ , gobject-introspection , gtk3 , itstool -, libwnck3 +, libwnck , keybinder3 , desktop-file-utils , shared-mime-info @@ -34,7 +34,7 @@ buildPythonApplication rec { desktop-file-utils # for update-desktop-database shared-mime-info # for update-mime-info ]; - buildInputs = [ docutils libwnck3 keybinder3 ]; + buildInputs = [ docutils libwnck keybinder3 ]; propagatedBuildInputs = [ pygobject3 gtk3 pyxdg dbus-python pycairo ]; # without strictDeps kupfer fails to build: Could not find the python module 'gi.repository.Gtk' diff --git a/third_party/nixpkgs/pkgs/applications/misc/logseq/default.nix b/third_party/nixpkgs/pkgs/applications/misc/logseq/default.nix index 1900b92e3b..20648cf7a4 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/logseq/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/logseq/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "logseq"; - version = "0.1.3"; + version = "0.2.0"; src = fetchurl { url = "https://github.com/logseq/logseq/releases/download/${version}/logseq-linux-x64-${version}.AppImage"; - sha256 = "1akg3xjbh01nb7l06qpvz3xsjj64kf042xjnapn60jlgg5y34vbm"; + sha256 = "uFINB8WXFbtI/WMFvqirAygzwK7I/8+8YPeyCd+xQ5w="; name = "${pname}-${version}.AppImage"; }; diff --git a/third_party/nixpkgs/pkgs/applications/misc/lutris/fhsenv.nix b/third_party/nixpkgs/pkgs/applications/misc/lutris/fhsenv.nix index c7238fb015..19cb7f6c55 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/lutris/fhsenv.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/lutris/fhsenv.nix @@ -95,7 +95,7 @@ in buildFHSUserEnv { libao libevdev udev libgcrypt libxml2 libusb-compat-0_1 libpng libmpeg2 libv4l libjpeg libxkbcommon libass libcdio libjack2 libsamplerate libzip libmad libaio libcap libtiff libva libgphoto2 libxslt libsndfile giflib zlib glib - alsaLib zziplib bash dbus keyutils zip cabextract freetype unzip coreutils + alsa-lib zziplib bash dbus keyutils zip cabextract freetype unzip coreutils readline gcc SDL SDL2 curl graphite2 gtk2 gtk3 udev ncurses wayland libglvnd vulkan-loader xdg-utils sqlite gnutls p11-kit libbsd harfbuzz diff --git a/third_party/nixpkgs/pkgs/applications/misc/moonlight-embedded/default.nix b/third_party/nixpkgs/pkgs/applications/misc/moonlight-embedded/default.nix index dd3fb85459..ef80236148 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/moonlight-embedded/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/moonlight-embedded/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, cmake, perl -, alsaLib, libevdev, libopus, udev, SDL2 +, alsa-lib, libevdev, libopus, udev, SDL2 , ffmpeg, pkg-config, xorg, libvdpau, libpulseaudio, libcec , curl, expat, avahi, enet, libuuid, libva }: @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake perl ]; buildInputs = [ - alsaLib libevdev libopus udev SDL2 + alsa-lib libevdev libopus udev SDL2 ffmpeg pkg-config xorg.libxcb libvdpau libpulseaudio libcec xorg.libpthreadstubs curl expat avahi enet libuuid libva ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/moonlight-qt/default.nix b/third_party/nixpkgs/pkgs/applications/misc/moonlight-qt/default.nix index ad9baec8f9..b02abc2f22 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/moonlight-qt/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/moonlight-qt/default.nix @@ -10,7 +10,7 @@ , libva , libvdpau , libxkbcommon -, alsaLib +, alsa-lib , libpulseaudio , openssl , libopus @@ -43,7 +43,7 @@ stdenv.mkDerivation rec { libva libvdpau libxkbcommon - alsaLib + alsa-lib libpulseaudio openssl libopus diff --git a/third_party/nixpkgs/pkgs/applications/misc/navit/CMakeLists.txt.patch b/third_party/nixpkgs/pkgs/applications/misc/navit/CMakeLists.txt.patch deleted file mode 100644 index 7f8a75f319..0000000000 --- a/third_party/nixpkgs/pkgs/applications/misc/navit/CMakeLists.txt.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/CMakeLists.txt b/CMakeLists.txt -index 763f75b..defa74a 100755 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -212,7 +212,7 @@ CHECK_INCLUDE_FILES(endian.h HAVE_ENDIAN_H) - CHECK_INCLUDE_FILES(stdint.h HAVE_STDINT_H) - CHECK_INCLUDE_FILES(byteswap.h HAVE_BYTESWAP_H) - CHECK_LIBRARY_EXISTS(gypsy gypsy_control_get_default "" GYPSY_FOUND) --CHECK_INCLUDE_FILES(libspeechd.h HAVE_LIBSPEECHD) -+CHECK_INCLUDE_FILES(speech-dispatcher/libspeechd.h HAVE_LIBSPEECHD) - CHECK_INCLUDE_FILES(sys/socket.h HAVE_SOCKET) - CHECK_INCLUDE_FILES(sys/shm.h HAVE_SHMEM) - CHECK_FUNCTION_EXISTS(snprintf HAVE_SNPRINTF) diff --git a/third_party/nixpkgs/pkgs/applications/misc/navit/default.nix b/third_party/nixpkgs/pkgs/applications/misc/navit/default.nix deleted file mode 100644 index c041c29692..0000000000 --- a/third_party/nixpkgs/pkgs/applications/misc/navit/default.nix +++ /dev/null @@ -1,90 +0,0 @@ -{ lib, stdenv, fetchFromGitHub, pkg-config, gtk2, fontconfig, freetype, imlib2 -, SDL_image, libGLU, libGL, libXmu, freeglut, pcre, dbus, dbus-glib, glib -, librsvg, freeimage, libxslt, cairo, gdk-pixbuf, pango -, atk, patchelf, fetchurl, bzip2, python, gettext, quesoglc -, gd, cmake, shapelib, SDL_ttf, fribidi, makeWrapper -, qtquickcontrols, qtmultimedia, qtspeech, qtsensors -, qtlocation, qtdeclarative, qtsvg -, qtSupport ? false, qtbase #need to fix qt_qpainter -, sdlSupport ? true, SDL -, xkbdSupport ? true, xkbd -, espeakSupport ? true, espeak -, postgresqlSupport ? false, postgresql -, speechdSupport ? false, speechd ? null -}: - -assert speechdSupport -> speechd != null; - -with lib; -stdenv.mkDerivation rec { - pname = "navit"; - version = "0.5.3"; - - src = fetchFromGitHub { - owner = "navit-gps"; - repo = "navit"; - rev = "v${version}"; - sha256 = "071drvqzxpxbfh0lf0lra5a97rv8ny40l96n9xl0dx0s8w30j61i"; - }; - - sample_map = fetchurl { - url = "http://www.navit-project.org/maps/osm_bbox_11.3,47.9,11.7,48.2.osm.bz2"; - name = "sample_map.bz2"; - sha256 = "0vg6b6rhsa2cxqj4rbhfhhfss71syhnfa6f1jg2i2d7l88dm5x7d"; - }; - - patches = [ ./CMakeLists.txt.patch ]; - - NIX_CFLAGS_COMPILE = toString (optional sdlSupport "-I${SDL.dev}/include/SDL" - ++ optional speechdSupport "-I${speechd}/include/speech-dispatcher"); - - # we choose only cmdline and speech-dispatcher speech options. - # espeak builtins is made for non-cmdline OS as winCE - cmakeFlags = [ - "-DSAMPLE_MAP=n " "-DCMAKE_BUILD_TYPE=Release" - "-Dspeech/qt5_espeak=FALSE" "-Dsupport/espeak=FALSE" - ]; - - buildInputs = [ - gtk2 fontconfig freetype imlib2 libGLU libGL freeimage - libxslt libXmu freeglut python gettext quesoglc gd - fribidi pcre dbus dbus-glib librsvg shapelib glib - cairo gdk-pixbuf pango atk - ] ++ optionals sdlSupport [ SDL SDL_ttf SDL_image ] - ++ optional postgresqlSupport postgresql - ++ optional speechdSupport speechd - ++ optionals qtSupport [ - qtquickcontrols qtmultimedia qtspeech qtsensors - qtbase qtlocation qtdeclarative qtsvg - ]; - - nativeBuildInputs = [ makeWrapper pkg-config cmake patchelf bzip2 ]; - - # we dont want blank screen by defaut - postInstall = '' - # emulate DSAMPLE_MAP - mkdir -p $out/share/navit/maps/ - bzcat "${sample_map}" | $out/bin/maptool "$out/share/navit/maps/osm_bbox_11.3,47.9,11.7,48.2.bin" - ''; - - # TODO: fix upstream? - libPath = lib.makeLibraryPath ([ stdenv.cc.libc ] ++ buildInputs ); - postFixup = - '' - find "$out/lib" -type f -name "*.so" -exec patchelf --set-rpath $libPath {} \; - - wrapProgram $out/bin/navit \ - --prefix PATH : ${makeBinPath ( - optional xkbdSupport xkbd - ++ optional espeakSupport espeak - ++ optional speechdSupport speechd ) } - ''; - - meta = { - homepage = "https://www.navit-project.org"; - description = "Car navigation system with routing engine using OSM maps"; - license = licenses.gpl2; - maintainers = [ ]; - platforms = platforms.linux; - }; -} diff --git a/third_party/nixpkgs/pkgs/applications/misc/neo4j-desktop/default.nix b/third_party/nixpkgs/pkgs/applications/misc/neo4j-desktop/default.nix new file mode 100644 index 0000000000..045f0db42f --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/neo4j-desktop/default.nix @@ -0,0 +1,32 @@ +{ appimageTools, lib, fetchurl }: +let + pname = "neo4j-desktop"; + version = "1.4.5"; + name = "${pname}-${version}"; + + src = fetchurl { + url = "https://s3-eu-west-1.amazonaws.com/dist.neo4j.org/${pname}/linux-offline/${name}-x86_64.AppImage"; + sha256 = "sha256-TCkjYhvGhgqgrDEMvC4Ww/sDxRhHC70YgfDlCIFitMo"; + }; + + appimageContents = appimageTools.extract { inherit src; name = pname; }; +in appimageTools.wrapType2 { + inherit name src; + + extraPkgs = pkgs: with pkgs; [ libsecret ]; + + extraInstallCommands = '' + install -m 444 -D ${appimageContents}/${pname}.desktop -t $out/share/applications + substituteInPlace $out/share/applications/${pname}.desktop \ + --replace 'Exec=AppRun' 'Exec=${pname}' + cp -r ${appimageContents}/usr/share/icons $out/share + ''; + + meta = with lib; { + description = "A GUI front-end for Neo4j"; + homepage = "https://neo4j.com/"; + license = licenses.unfree; + maintainers = [ maintainers.bobvanderlinden ]; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/misc/notify-osd-customizable/default.nix b/third_party/nixpkgs/pkgs/applications/misc/notify-osd-customizable/default.nix index b00ee18d5f..820eceabb5 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/notify-osd-customizable/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/notify-osd-customizable/default.nix @@ -5,7 +5,7 @@ , gnome , libnotify , libtool -, libwnck3 +, libwnck , makeWrapper , pkg-config , gsettings-desktop-schemas @@ -26,7 +26,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; buildInputs = [ - glib libwnck3 libnotify dbus-glib makeWrapper + glib libwnck libnotify dbus-glib makeWrapper gsettings-desktop-schemas gnome.gnome-common libtool ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/notify-osd/default.nix b/third_party/nixpkgs/pkgs/applications/misc/notify-osd/default.nix index d68601ca6e..005d027346 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/notify-osd/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/notify-osd/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, pkg-config, glib, libwnck3, libnotify, dbus-glib, makeWrapper, gsettings-desktop-schemas }: +{ lib, stdenv, fetchurl, pkg-config, glib, libwnck, libnotify, dbus-glib, makeWrapper, gsettings-desktop-schemas }: stdenv.mkDerivation rec { pname = "notify-osd"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; buildInputs = [ - glib libwnck3 libnotify dbus-glib makeWrapper + glib libwnck libnotify dbus-glib makeWrapper gsettings-desktop-schemas ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/nwg-menu/default.nix b/third_party/nixpkgs/pkgs/applications/misc/nwg-menu/default.nix new file mode 100644 index 0000000000..5c4b508bb6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/nwg-menu/default.nix @@ -0,0 +1,48 @@ +{ lib, fetchFromGitHub +, buildGoModule, pkg-config, wrapGAppsHook, gobject-introspection +, gtk-layer-shell, gtk3, pango, gdk-pixbuf, atk +}: + +buildGoModule rec { + pname = "nwg-menu"; + version = "unstable-2021-06-12"; + + src = fetchFromGitHub { + owner = "nwg-piotr"; + repo = "nwg-menu"; + rev = "b0746e26514a047ed9c6b975a71b7263aa39bd56"; + hash = "sha256-rxyf3CfpfWnRAlIR/pl+s7LGAZbZjdtNWPPK7BecdhQ="; + }; + + vendorSha256 = "sha256-nN5iBleK12SKY9PBiDA+tM4B8FiVGZLXbtJM2+YrEfA="; + + runVend = true; + + doCheck = false; + + buildInputs = [ atk gtk3 gdk-pixbuf gtk-layer-shell pango ]; + nativeBuildInputs = [ pkg-config wrapGAppsHook gobject-introspection ]; + + prePatch = '' + for file in main.go tools.go; do + substituteInPlace $file --replace '/usr/share/nwg-menu' $out/share + done + ''; + + postInstall = '' + mkdir -p $out/share/ + cp menu-start.css $out/share/ + ''; + + preFixup = '' + gappsWrapperArgs+=(--prefix XDG_DATA_DIRS : "$out/share") + ''; + + meta = with lib; { + homepage = "https://github.com/nwg-piotr/nwg-menu"; + description = "MenuStart plugin for nwg-panel"; + license = licenses.mit; + platforms = platforms.linux; + maintainers = with maintainers; [ berbiche ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/misc/octoprint/default.nix b/third_party/nixpkgs/pkgs/applications/misc/octoprint/default.nix index af42466d0e..0c0dae0da4 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/octoprint/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/octoprint/default.nix @@ -33,6 +33,22 @@ let (mkOverride "unidecode" "0.04.21" "280a6ab88e1f2eb5af79edff450021a0d3f0448952847cd79677e55e58bad051") (mkOverride "sarge" "0.1.5.post0" "1c1ll7pys9vra5cfi8jxlgrgaql6c27l6inpy15aprgqhc4ck36s") + # Requires websocket-client <1.0, >=0.57. Cannot do mkOverride b/c differing underscore/hyphen in pypi source name + ( + self: super: { + websocket-client = super.websocket-client.overridePythonAttrs ( + oldAttrs: rec { + version = "0.58.0"; + src = oldAttrs.src.override { + pname = "websocket_client"; + inherit version; + sha256 = "63509b41d158ae5b7f67eb4ad20fecbb4eee99434e73e140354dc3ff8e09716f"; + }; + } + ); + } + ) + # Octoprint needs zeroconf >=0.24 <0.25. While this should be done in # the mkOverride aboves, this package also has broken tests, so we need # a proper override. @@ -134,7 +150,7 @@ let tornado unidecode watchdog - websocket_client + websocket-client werkzeug wrapt zeroconf diff --git a/third_party/nixpkgs/pkgs/applications/misc/opentx/default.nix b/third_party/nixpkgs/pkgs/applications/misc/opentx/default.nix index 2ca4e3203a..71bab08960 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/opentx/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/opentx/default.nix @@ -6,13 +6,13 @@ mkDerivation rec { pname = "opentx"; - version = "2.3.11"; + version = "2.3.13"; src = fetchFromGitHub { owner = "opentx"; repo = "opentx"; rev = "release/${version}"; - sha256 = "sha256-0B41TkTs4sNGYzpMGbsgCLT2ThkP6foeuwLUIzKKGkU="; + sha256 = "sha256-Bi/Cz2T2NdtnJZHav8qvo+gErPsR8Ym7K3KcD5APt6Y="; }; nativeBuildInputs = [ cmake gcc-arm-embedded python3Packages.pillow ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/plank/default.nix b/third_party/nixpkgs/pkgs/applications/misc/plank/default.nix index 30d9533d45..85e3bb4811 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/plank/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/plank/default.nix @@ -7,7 +7,7 @@ , glib , gnome , gtk3 -, libwnck3 +, libwnck , libX11 , libXfixes , libXi @@ -59,7 +59,7 @@ stdenv.mkDerivation rec { libXi libdbusmenu-gtk3 libgee - libwnck3 + libwnck pango ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/polar-bookshelf/default.nix b/third_party/nixpkgs/pkgs/applications/misc/polar-bookshelf/default.nix index 03a83c1179..8fcd9e1a04 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/polar-bookshelf/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/polar-bookshelf/default.nix @@ -27,7 +27,7 @@ , libXScrnSaver , nss , nspr -, alsaLib +, alsa-lib , cups , fontconfig , expat @@ -78,7 +78,7 @@ stdenv.mkDerivation rec { libXScrnSaver nss nspr - alsaLib + alsa-lib cups fontconfig expat diff --git a/third_party/nixpkgs/pkgs/applications/misc/polybar/default.nix b/third_party/nixpkgs/pkgs/applications/misc/polybar/default.nix index 2c431e68de..099813483a 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/polybar/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/polybar/default.nix @@ -19,7 +19,7 @@ , xcbutilxrm , makeWrapper , removeReferencesTo -, alsaLib +, alsa-lib , curl , libmpdclient , libpulseaudio @@ -75,7 +75,7 @@ stdenv.mkDerivation rec { xcbutilwm xcbutilxrm ] - ++ lib.optional alsaSupport alsaLib + ++ lib.optional alsaSupport alsa-lib ++ lib.optional githubSupport curl ++ lib.optional mpdSupport libmpdclient ++ lib.optional pulseSupport libpulseaudio diff --git a/third_party/nixpkgs/pkgs/applications/misc/printrun/default.nix b/third_party/nixpkgs/pkgs/applications/misc/printrun/default.nix index 6316095513..7ae8662e2c 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/printrun/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/printrun/default.nix @@ -1,4 +1,4 @@ -{ lib, python3Packages, fetchFromGitHub }: +{ lib, python3Packages, fetchFromGitHub, glib, wrapGAppsHook }: python3Packages.buildPythonApplication rec { pname = "printrun"; @@ -11,6 +11,8 @@ python3Packages.buildPythonApplication rec { sha256 = "179x8lwrw2h7cxnkq7izny6qcb4nhjnd8zx893i77zfhzsa6kx81"; }; + nativeBuildInputs = [ glib wrapGAppsHook ]; + propagatedBuildInputs = with python3Packages; [ appdirs cython dbus-python numpy six wxPython_4_0 psutil pyglet pyopengl pyserial ]; @@ -29,6 +31,14 @@ python3Packages.buildPythonApplication rec { done ''; + dontWrapGApps = true; + # https://github.com/NixOS/nixpkgs/issues/56943 + strictDeps = false; + + preFixup = '' + makeWrapperArgs+=("''${gappsWrapperArgs[@]}") + ''; + meta = with lib; { description = "Pronterface, Pronsole, and Printcore - Pure Python 3d printing host software"; homepage = "https://github.com/kliment/Printrun"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/privacyidea/default.nix b/third_party/nixpkgs/pkgs/applications/misc/privacyidea/default.nix similarity index 58% rename from third_party/nixpkgs/pkgs/development/python-modules/privacyidea/default.nix rename to third_party/nixpkgs/pkgs/applications/misc/privacyidea/default.nix index 11ff6f71af..7545253d50 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/privacyidea/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/privacyidea/default.nix @@ -1,43 +1,43 @@ -{ lib, buildPythonPackage, fetchFromGitHub, cacert, openssl, python, nixosTests - -, cryptography, pyrad, pymysql, python-dateutil, flask-versioned, flask_script -, defusedxml, croniter, flask_migrate, pyjwt1, configobj, sqlsoup, pillow -, python-gnupg, passlib, pyopenssl, beautifulsoup4, smpplib, flask-babel -, ldap3, huey, pyyaml, qrcode, oauth2client, requests, lxml, cbor2, psycopg2 -, pydash, ecdsa - -, mock, pytestCheckHook, responses, testfixtures +{ lib, fetchFromGitHub, cacert, openssl, nixosTests +, python3 }: -buildPythonPackage rec { +let + python3' = python3.override { + packageOverrides = self: super: { + sqlalchemy = super.sqlalchemy.overridePythonAttrs (oldAttrs: rec { + version = "1.3.24"; + src = oldAttrs.src.override { + inherit version; + sha256 = "ebbb777cbf9312359b897bf81ba00dae0f5cb69fba2a18265dcc18a6f5ef7519"; + }; + }); + }; + }; +in +python3'.pkgs.buildPythonPackage rec { pname = "privacyIDEA"; - version = "3.5.2"; + version = "3.6"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "sha256-k2om2LjkFRCT53ECPAJEztCiMdz4fF5eoipVUvSoyGo="; + sha256 = "sha256-yywkQ3TdBzRMbJGY0Seaprztgt0JrCAbgqosMQ5fcQM="; fetchSubmodules = true; }; - patches = [ - # Subset of https://github.com/privacyidea/privacyidea/commit/359db6dd10212b8a210e0a83536e92e9e796a1f8, - # fixes app context errors in tests. Can be removed on the next bump. - ./fix-tests.patch - ]; - - propagatedBuildInputs = [ + propagatedBuildInputs = with python3'.pkgs; [ cryptography pyrad pymysql python-dateutil flask-versioned flask_script defusedxml croniter flask_migrate pyjwt1 configobj sqlsoup pillow python-gnupg passlib pyopenssl beautifulsoup4 smpplib flask-babel ldap3 huey pyyaml qrcode oauth2client requests lxml cbor2 psycopg2 - pydash ecdsa + pydash ecdsa google-auth importlib-metadata ]; passthru.tests = { inherit (nixosTests) privacyidea; }; - checkInputs = [ openssl mock pytestCheckHook responses testfixtures ]; + checkInputs = with python3'.pkgs; [ openssl mock pytestCheckHook responses testfixtures ]; disabledTests = [ "AESHardwareSecurityModuleTestCase" "test_01_cert_request" @@ -61,7 +61,7 @@ buildPythonPackage rec { ''; postInstall = '' - rm -rf $out/${python.sitePackages}/tests + rm -r $out/${python3'.sitePackages}/tests ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/misc/prusa-slicer/super-slicer.nix b/third_party/nixpkgs/pkgs/applications/misc/prusa-slicer/super-slicer.nix index 4175cb2b22..2bf28aa892 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/prusa-slicer/super-slicer.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/prusa-slicer/super-slicer.nix @@ -1,7 +1,7 @@ { lib, fetchFromGitHub, makeDesktopItem, prusa-slicer }: let appname = "SuperSlicer"; - version = "2.2.54.2"; + version = "2.3.56.5"; pname = "super-slicer"; description = "PrusaSlicer fork with more features and faster development cycle"; override = super: { @@ -10,20 +10,19 @@ let src = fetchFromGitHub { owner = "supermerill"; repo = "SuperSlicer"; - sha256 = "sha256-ThmsxFXI1uReK+JwpHrIWzHpBdIOP77kDjv+QaK+Azk="; + sha256 = "sha256-Gg+LT1YKyUGNJE9XvWE1LSlIQ6Vq5GfVBTUw/A7Qx7E="; rev = version; + fetchSubmodules = true; }; + # We don't need PS overrides anymore, and gcode-viewer is embedded in the binary. + postInstall = null; + # See https://github.com/supermerill/SuperSlicer/issues/432 cmakeFlags = super.cmakeFlags ++ [ "-DSLIC3R_BUILD_TESTS=0" ]; - postInstall = '' - mkdir -p "$out/share/pixmaps/" - ln -s "$out/share/SuperSlicer/icons/Slic3r.png" "$out/share/pixmaps/${appname}.png" - ''; - desktopItems = [ (makeDesktopItem { name = appname; diff --git a/third_party/nixpkgs/pkgs/applications/misc/qlcplus/default.nix b/third_party/nixpkgs/pkgs/applications/misc/qlcplus/default.nix index 439af2b8c0..d387468bcd 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/qlcplus/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/qlcplus/default.nix @@ -1,5 +1,5 @@ { lib, mkDerivation, fetchFromGitHub, fetchpatch, qmake, pkg-config, udev -, qtmultimedia, qtscript, alsaLib, ola, libftdi1, libusb-compat-0_1 +, qtmultimedia, qtscript, alsa-lib, ola, libftdi1, libusb-compat-0_1 , libsndfile, libmad }: @@ -24,7 +24,7 @@ mkDerivation rec { nativeBuildInputs = [ qmake pkg-config ]; buildInputs = [ - udev qtmultimedia qtscript alsaLib ola libftdi1 libusb-compat-0_1 libsndfile libmad + udev qtmultimedia qtscript alsa-lib ola libftdi1 libusb-compat-0_1 libsndfile libmad ]; qmakeFlags = [ "INSTALLROOT=$(out)" ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/robo3t/default.nix b/third_party/nixpkgs/pkgs/applications/misc/robo3t/default.nix index 1b19d9ab9c..41f3475a64 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/robo3t/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/robo3t/default.nix @@ -1,5 +1,18 @@ -{ lib, stdenv, fetchurl, curl, zlib, glib, xorg, dbus, fontconfig, libGL, - freetype, xkeyboard_config, makeDesktopItem, makeWrapper }: +{ lib +, stdenv +, fetchurl +, curl +, zlib +, glib +, xorg +, dbus +, fontconfig +, libGL +, freetype +, xkeyboard_config +, makeDesktopItem +, makeWrapper +}: let curlWithGnuTls = curl.override { gnutlsSupport = true; sslSupport = false; }; @@ -30,7 +43,7 @@ stdenv.mkDerivation rec { categories = "Development;IDE;"; }; - nativeBuildInputs = [makeWrapper]; + nativeBuildInputs = [ makeWrapper ]; ldLibraryPath = lib.makeLibraryPath [ stdenv.cc.cc @@ -51,6 +64,8 @@ stdenv.mkDerivation rec { ]; installPhase = '' + runHook preInstall + BASEDIR=$out/lib/robo3t mkdir -p $BASEDIR/bin @@ -72,13 +87,15 @@ stdenv.mkDerivation rec { makeWrapper $BASEDIR/bin/robo3t $out/bin/robo3t \ --suffix LD_LIBRARY_PATH : ${ldLibraryPath} \ --suffix QT_XKB_CONFIG_ROOT : ${xkeyboard_config}/share/X11/xkb + + runHook postInstall ''; - meta = { + meta = with lib; { homepage = "https://robomongo.org/"; - description = "Query GUI for mongodb"; + description = "Query GUI for mongodb. Formerly called Robomongo"; platforms = [ "x86_64-linux" ]; - license = lib.licenses.gpl3; - maintainers = [ lib.maintainers.eperuffo ]; + license = licenses.gpl3Only; + maintainers = with maintainers; [ eperuffo ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/misc/robomongo/default.nix b/third_party/nixpkgs/pkgs/applications/misc/robomongo/default.nix deleted file mode 100644 index af5285909c..0000000000 --- a/third_party/nixpkgs/pkgs/applications/misc/robomongo/default.nix +++ /dev/null @@ -1,77 +0,0 @@ -{ lib, stdenv, fetchurl, zlib, glib, xorg, dbus, fontconfig, - freetype, xkeyboard_config, makeDesktopItem, makeWrapper }: - -stdenv.mkDerivation rec { - pname = "robomongo"; - version = "0.9.0"; - - src = fetchurl { - url = "https://download.robomongo.org/${version}/linux/robomongo-${version}-linux-x86_64-0786489.tar.gz"; - sha256 = "1q8ahdz3afcw002p8dl2pybzkq4srk6bnikrz216yx1gswivdcad"; - }; - - icon = fetchurl { - url = "https://github.com/Studio3T/robomongo/raw/${version}/trash/install/linux/robomongo.png"; - sha256 = "15li8536x600kkfkb3h6mw7y0f2ljkv951pc45dpiw036vldibv2"; - }; - - desktopItem = makeDesktopItem { - name = "robomongo"; - exec = "robomongo"; - icon = icon; - comment = "Query GUI for mongodb"; - desktopName = "Robomongo"; - genericName = "MongoDB management tool"; - categories = "Development;IDE;mongodb;"; - }; - - nativeBuildInputs = [makeWrapper]; - - ldLibraryPath = lib.makeLibraryPath [ - stdenv.cc.cc - zlib - glib - xorg.libXi - xorg.libxcb - xorg.libXrender - xorg.libX11 - xorg.libSM - xorg.libICE - xorg.libXext - dbus - fontconfig - freetype - ]; - - installPhase = '' - BASEDIR=$out/lib/robomongo - - mkdir -p $BASEDIR/bin - cp bin/* $BASEDIR/bin - - mkdir -p $BASEDIR/lib - cp -r lib/* $BASEDIR/lib - - mkdir -p $out/share/applications - cp $desktopItem/share/applications/* $out/share/applications - - mkdir -p $out/share/icons - cp ${icon} $out/share/icons/robomongo.png - - patchelf --set-interpreter ${stdenv.glibc}/lib/ld-linux-x86-64.so.2 $BASEDIR/bin/robomongo - - mkdir $out/bin - - makeWrapper $BASEDIR/bin/robomongo $out/bin/robomongo \ - --suffix LD_LIBRARY_PATH : ${ldLibraryPath} \ - --suffix QT_XKB_CONFIG_ROOT : ${xkeyboard_config}/share/X11/xkb - ''; - - meta = { - homepage = "https://robomongo.org/"; - description = "Query GUI for mongodb"; - platforms = lib.intersectLists lib.platforms.linux lib.platforms.x86_64; - license = lib.licenses.gpl3; - maintainers = [ lib.maintainers.eperuffo ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/applications/misc/rofi/default.nix b/third_party/nixpkgs/pkgs/applications/misc/rofi/default.nix index 33a37e3261..d47d1fe26a 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/rofi/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/rofi/default.nix @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { description = "Window switcher, run dialog and dmenu replacement"; homepage = "https://github.com/davatorium/rofi"; license = licenses.mit; - maintainers = with maintainers; [ mbakke ]; + maintainers = with maintainers; [ ]; platforms = with platforms; linux; }; } diff --git a/third_party/nixpkgs/pkgs/applications/misc/sampler/default.nix b/third_party/nixpkgs/pkgs/applications/misc/sampler/default.nix index b68a3a98e3..2e1b94b6b6 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/sampler/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/sampler/default.nix @@ -1,4 +1,4 @@ -{ lib, buildGoModule, fetchFromGitHub, alsaLib }: +{ lib, buildGoModule, fetchFromGitHub, alsa-lib }: buildGoModule rec { pname = "sampler"; @@ -17,7 +17,7 @@ buildGoModule rec { subPackages = [ "." ]; - buildInputs = [ alsaLib ]; + buildInputs = [ alsa-lib ]; meta = with lib; { description = "Tool for shell commands execution, visualization and alerting"; diff --git a/third_party/nixpkgs/pkgs/applications/misc/scli/default.nix b/third_party/nixpkgs/pkgs/applications/misc/scli/default.nix index 93fd5d4194..9694e9b691 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/scli/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/scli/default.nix @@ -1,18 +1,28 @@ -{ lib, buildPythonApplication, fetchFromGitHub, signal-cli, urwid -, urwid-readline, dbus }: +{ lib +, python3 +, fetchFromGitHub +, dbus +, signal-cli +, xclip +}: -buildPythonApplication rec { +python3.pkgs.buildPythonApplication rec { pname = "scli"; - version = "0.6.1"; + version = "0.6.3"; src = fetchFromGitHub { owner = "isamert"; repo = pname; rev = "v${version}"; - sha256 = "sha256-hWzpqj/sxPq/doxdmytnj5rh2qKQE71WMB0ugomWhHg"; + sha256 = "sha256-QGVBJKTBo2RckGwW1deM2toRPT73PYDLvr7YVepkQvg="; }; - propagatedBuildInputs = [ signal-cli urwid urwid-readline dbus ]; + propagatedBuildInputs = with python3.pkgs; [ + pyqrcode + urwid + urwid-readline + ]; + dontBuild = true; checkPhase = '' @@ -29,6 +39,10 @@ buildPythonApplication rec { install -m755 -D scli $out/bin/scli ''; + makeWrapperArgs = [ + "--prefix" "PATH" ":" (lib.makeBinPath [ dbus signal-cli xclip ]) + ]; + meta = with lib; { description = "Simple terminal user interface for Signal"; homepage = "https://github.com/isamert/scli"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libseat/default.nix b/third_party/nixpkgs/pkgs/applications/misc/seatd/default.nix similarity index 74% rename from third_party/nixpkgs/pkgs/development/libraries/libseat/default.nix rename to third_party/nixpkgs/pkgs/applications/misc/seatd/default.nix index bdefb51b50..e07356d0c3 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libseat/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/seatd/default.nix @@ -3,12 +3,13 @@ , meson , ninja , pkg-config +, scdoc , stdenv , systemd }: stdenv.mkDerivation rec { - pname = "libseat"; + pname = "seatd"; version = "0.5.0"; src = fetchFromSourcehut { @@ -18,13 +19,13 @@ stdenv.mkDerivation rec { sha256 = "sha256-JwlJLHkRgSRqfQEhXbzuFTmhxfbwKVdLICPbTDbC9M0="; }; - nativeBuildInputs = [ meson ninja pkg-config ]; + outputs = [ "bin" "out" "dev" "man" ]; - buildInputs = [ - systemd - ]; + nativeBuildInputs = [ meson ninja pkg-config scdoc ]; - mesonFlags = [ "-Dserver=disabled" "-Dseatd=disabled" "-Dlogind=enabled"]; + buildInputs = [ systemd ]; + + mesonFlags = [ "-Dlogind=enabled" "-Dbuiltin=enabled" ]; meta = with lib; { description = "A universal seat management library"; diff --git a/third_party/nixpkgs/pkgs/applications/misc/skytemple/default.nix b/third_party/nixpkgs/pkgs/applications/misc/skytemple/default.nix index a67d79f9bf..0daaad2f26 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/skytemple/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/skytemple/default.nix @@ -1,4 +1,4 @@ -{ lib, fetchFromGitHub, gobject-introspection, gtk3, gtksourceview3, wrapGAppsHook, python3Packages }: +{ lib, fetchFromGitHub, gobject-introspection, gtk3, gtksourceview3, webkitgtk, wrapGAppsHook, python3Packages }: python3Packages.buildPythonApplication rec { pname = "skytemple"; @@ -11,7 +11,15 @@ python3Packages.buildPythonApplication rec { sha256 = "0l2c4qngv58j6zkp0va6m96zksx8gqn3mjc3isqybfnhjr6nd3v9"; }; - buildInputs = [ gobject-introspection gtk3 gtksourceview3 ]; + buildInputs = [ + gobject-introspection + gtk3 + gtksourceview3 + # webkitgkt is used for rendering interactive statistics graph which + # can be seen by opening a ROM, entering Pokemon section, selecting + # any Pokemon, and clicking Stats and Moves tab. + webkitgtk + ]; nativeBuildInputs = [ gobject-introspection wrapGAppsHook ]; propagatedBuildInputs = with python3Packages; [ natsort diff --git a/third_party/nixpkgs/pkgs/applications/misc/slides/default.nix b/third_party/nixpkgs/pkgs/applications/misc/slides/default.nix new file mode 100644 index 0000000000..4eb0981d81 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/slides/default.nix @@ -0,0 +1,35 @@ +{ lib, buildGoModule, fetchFromGitHub, bash, go, python3, ruby, sd }: + +buildGoModule rec { + pname = "slides"; + version = "0.3.0"; + + src = fetchFromGitHub { + owner = "maaslalani"; + repo = "slides"; + rev = "v${version}"; + sha256 = "00sml6b9q3df9dgl7fpsn6a3qkq6xklnbfvvblf91xdf4ssn7wrx"; + }; + + checkInputs = [ + bash + go + python3 + ruby + sd + ]; + + vendorSha256 = "0y6fz9rw702mji571k0gp4kpfx7xbv7rvlnmpfjygy6lmp7wga6f"; + + ldflags = [ + "-s" "-w" + "-X=main.Version=${version}" + ]; + + meta = with lib; { + description = "Terminal based presentation tool"; + homepage = "https://github.com/maaslalani/slides"; + license = licenses.mit; + maintainers = with maintainers; [ maaslalani ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/misc/solaar/default.nix b/third_party/nixpkgs/pkgs/applications/misc/solaar/default.nix index bb1573f74c..b6059ac1a7 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/solaar/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/solaar/default.nix @@ -4,13 +4,13 @@ # logitech-udev-rules instead of adding this to services.udev.packages on NixOS python3Packages.buildPythonApplication rec { pname = "solaar"; - version = "1.0.5"; + version = "1.0.6"; src = fetchFromGitHub { owner = "pwr-Solaar"; repo = "Solaar"; rev = version; - sha256 = "sha256-k87DqIkvy5CVEsHT82ZArSM2JBi5sYdSCPfP4KjI850="; + sha256 = "sha256-Ys0005hIQ+fT4oMeU5iFtbLNqn1WM6iLdIKGwdyn7BM="; }; propagatedBuildInputs = with python3Packages; [ diff --git a/third_party/nixpkgs/pkgs/applications/misc/spicetify-cli/default.nix b/third_party/nixpkgs/pkgs/applications/misc/spicetify-cli/default.nix index 62a6d4785f..e20b95922f 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/spicetify-cli/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/spicetify-cli/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "spicetify-cli"; - version = "1.2.1"; + version = "2.2.6"; src = fetchFromGitHub { owner = "khanhas"; repo = pname; rev = "v${version}"; - sha256 = "sha256-HASFaPqm/A1QQ4nkd2hgeyqWplwE1RTrWA937rJA5Oo="; + sha256 = "sha256-9g6rkSDjE7x/YprPX0dkzqgpjgED5qBpUUQoVv6fGkk="; }; vendorSha256 = "sha256-g0RYIVIq4oMXdRZDBDnVYg7ombN5WEo/6O9hChQvOYs="; diff --git a/third_party/nixpkgs/pkgs/applications/misc/subsurface/default.nix b/third_party/nixpkgs/pkgs/applications/misc/subsurface/default.nix index 19fdd4640e..7420267aa7 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/subsurface/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/subsurface/default.nix @@ -5,13 +5,13 @@ }: let - version = "4.9.10"; + version = "5.0.1"; subsurfaceSrc = (fetchFromGitHub { owner = "Subsurface"; repo = "subsurface"; rev = "v${version}"; - sha256 = "12ndhjplz3cwndwzhfc959dc0i6rm2qf3v2d8n9kba8nj63iblfs"; + sha256 = "01r836ckvrmgprjf4cqxn2n3w5w4pa2fjrhspjndsspic8nwlrwg"; fetchSubmodules = true; }); @@ -40,13 +40,13 @@ let googlemaps = stdenv.mkDerivation rec { pname = "googlemaps"; - version = "2018-06-02"; + version = "2021-03-19"; src = fetchFromGitHub { owner = "vladest"; repo = "googlemaps"; - rev = "54a357f9590d9cf011bf1713589f66bad65e00eb"; - sha256 = "159kslp6rj0qznzxijppwvv8jnswlfgf2pw4x8ladi8vp6bzxnzi"; + rev = "8f7def10c203fd3faa5ef96c5010a7294dca0759"; + sha256 = "1irz398g45hk6xizwzd07qcx1ln8f7l6bhjh15f56yc20waqpx1x"; }; nativeBuildInputs = [ qmake ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/survex/default.nix b/third_party/nixpkgs/pkgs/applications/misc/survex/default.nix new file mode 100644 index 0000000000..f6865f877d --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/survex/default.nix @@ -0,0 +1,79 @@ +{ lib +, stdenv +, fetchgit +, autoreconfHook +, pkg-config +, wxGTK30-gtk3 +, wxmac +, ffmpeg +, proj +, perl532 +, unscii +, python +, libGL +, libGLU +, xlibsWrapper +, docbook2x +, docbook5 +, Carbon +, Cocoa +}: + +let + perlenv = perl532.withPackages (perlPackages: with perlPackages; [ LocalePO ] ); +in +stdenv.mkDerivation rec { + pname = "survex"; + version = "1.2.44"; + + nativeBuildInputs = [ docbook5 docbook2x autoreconfHook pkg-config perlenv python ]; + + buildInputs = [ + libGL libGLU ffmpeg proj + ] ++ lib.optionals stdenv.hostPlatform.isDarwin [ + wxmac Carbon Cocoa + ] ++ lib.optionals stdenv.hostPlatform.isLinux [ + wxGTK30-gtk3 xlibsWrapper + ]; + + src = fetchgit { + url = "git://git.survex.com/survex"; + rev = version; + sha256 = "11gaqmabrf3av665jy3mr0m8hg76fmvnd0g3rghzmyh8d8v6xk34"; + }; + + enableParallelBuilding = true; + + # Docs rely on sgmltools-lite, a package that would be quite complex to + # provide as it is quite old. So this preConfigure hook effectively disables + # the doc generation. An example of packaging sgmltools-lite from Gentoo can + # be found here: + # https://gitweb.gentoo.org/repo/gentoo.git/tree/app-text/sgmltools-lite/sgmltools-lite-3.0.3-r15.ebuild?id=0b8b716331049599ea3299981e3a9ea6e258c5e0 + + postPatch = '' + patchShebangs . + echo "" > doc/Makefile.am + # substituteInPlace doc/Makefile --replace "docbook2man" "docbook2man --sgml" # Will be needed once sgmltools-lite is packaged. + for perltool in './extract-msgs.pl' './gettexttomsg.pl' '$(srcdir)/gdtconvert' '$(srcdir)/gen_img2aven'; do + substituteInPlace src/Makefile.am \ + --replace "$perltool" "${perlenv}/bin/perl $perltool" + done + substituteInPlace lib/Makefile.am \ + --replace '$(srcdir)/make-pixel-font' '${perlenv}/bin/perl $(srcdir)/make-pixel-font' + substituteInPlace lib/make-pixel-font --replace /usr/share/unifont/unifont.hex ${unscii.extra}/share/fonts/misc/unifont.hex + ''; + + meta = with lib; { + description = "Free Software/Open Source software package for mapping caves"; + longDescription = '' + Survex is a Free Software/Open Source software package for mapping caves, + licensed under the GPL. It is designed to be portable and can be run on a + variety of platforms, including Linux/Unix, macOS, and Microsoft Windows. + ''; + homepage = "https://survex.com/"; + changelog = "https://github.com/ojwb/survex/blob/${version}/NEWS"; + license = licenses.gpl2Plus; + maintainers = [ maintainers.matthewcroughan ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/misc/ticker/default.nix b/third_party/nixpkgs/pkgs/applications/misc/ticker/default.nix index fd37a692d8..a3e2dc11c6 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/ticker/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/ticker/default.nix @@ -5,16 +5,16 @@ buildGoModule rec { pname = "ticker"; - version = "4.0.3"; + version = "4.2.0"; src = fetchFromGitHub { owner = "achannarasappa"; repo = pname; rev = "v${version}"; - sha256 = "sha256-YVpspFBwao/7M2nTVMw+ANc0roL0vBO4DpNUb7Thp3Q="; + sha256 = "sha256-FavbBGmChWQ3xySPHlw5HisZwVaNe/NaxA6+InN8fL8="; }; - vendorSha256 = "sha256-nidOIjrTL4llV5GORebXOOPGeL6TxkurDY82cIc7+mU="; + vendorSha256 = "sha256-XBfTVd3X3IDxLCAaNnijf6E5bw+AZ94UdOG9w7BOdBU="; preBuild = '' buildFlagsArray+=("-ldflags" "-s -w -X github.com/achannarasappa/ticker/cmd.Version=v${version}") diff --git a/third_party/nixpkgs/pkgs/applications/misc/timewarrior/default.nix b/third_party/nixpkgs/pkgs/applications/misc/timewarrior/default.nix index 41dc179efe..adff6741d3 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/timewarrior/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/timewarrior/default.nix @@ -1,18 +1,20 @@ -{ lib, stdenv, fetchFromGitHub, cmake }: +{ lib, stdenv, fetchFromGitHub, cmake, asciidoctor }: stdenv.mkDerivation rec { pname = "timewarrior"; - version = "1.4.2"; + version = "1.4.3"; src = fetchFromGitHub { owner = "GothenburgBitFactory"; repo = "timewarrior"; rev = "v${version}"; - sha256 = "0qvhpva0hmhybn0c2aajndw5vnxar1jw4pjjajd2k2cr6vax29dw"; + sha256 = "00ydikzmxym5jhv6w1ii12a6zw5ighddbzxsw03xg8yabzzfnvzw"; fetchSubmodules = true; }; - nativeBuildInputs = [ cmake ]; + nativeBuildInputs = [ cmake asciidoctor ]; + + dontUseCmakeBuildDir = true; meta = with lib; { description = "A command-line time tracker"; diff --git a/third_party/nixpkgs/pkgs/applications/misc/ulauncher/default.nix b/third_party/nixpkgs/pkgs/applications/misc/ulauncher/default.nix index ebfaaa1db5..6d9d9deefa 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/ulauncher/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/ulauncher/default.nix @@ -59,7 +59,7 @@ python3Packages.buildPythonApplication rec { python-Levenshtein pyxdg requests - websocket_client + websocket-client ]; checkInputs = with python3Packages; [ diff --git a/third_party/nixpkgs/pkgs/applications/misc/upwork/default.nix b/third_party/nixpkgs/pkgs/applications/misc/upwork/default.nix index 6a60e81933..976aae7817 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/upwork/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/upwork/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, dpkg, wrapGAppsHook, autoPatchelfHook -, alsaLib, atk, at-spi2-atk, at-spi2-core, cairo, cups, dbus, expat, fontconfig, freetype +, alsa-lib, atk, at-spi2-atk, at-spi2-core, cairo, cups, dbus, expat, fontconfig, freetype , gdk-pixbuf, glib, gtk3, libnotify, libX11, libXcomposite, libXcursor, libXdamage, libuuid , libXext, libXfixes, libXi, libXrandr, libXrender, libXtst, nspr, nss, libxcb , pango, systemd, libXScrnSaver, libcxx, libpulseaudio }: @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { buildInputs = [ libcxx systemd libpulseaudio - stdenv.cc.cc alsaLib atk at-spi2-atk at-spi2-core cairo cups dbus expat fontconfig freetype + stdenv.cc.cc alsa-lib atk at-spi2-atk at-spi2-core cairo cups dbus expat fontconfig freetype gdk-pixbuf glib gtk3 libnotify libX11 libXcomposite libuuid libXcursor libXdamage libXext libXfixes libXi libXrandr libXrender libXtst nspr nss libxcb pango systemd libXScrnSaver diff --git a/third_party/nixpkgs/pkgs/applications/misc/usql/default.nix b/third_party/nixpkgs/pkgs/applications/misc/usql/default.nix new file mode 100644 index 0000000000..7a83ec05c1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/usql/default.nix @@ -0,0 +1,56 @@ +{ lib +, fetchFromGitHub +, buildGoModule +, unixODBC +, icu +}: + +buildGoModule rec { + pname = "usql"; + version = "0.9.1"; + + src = fetchFromGitHub { + owner = "xo"; + repo = "usql"; + rev = "v${version}"; + sha256 = "sha256-fcKn4kHIRvMdgGFKDNQg49YxLc0Y5j/8VwKoDLiXbEU="; + }; + + vendorSha256 = "sha256-uAV8NLnqXjIDILfnbbkVr2BOIucQ8vX89KI5yIkVtus="; + + buildInputs = [ unixODBC icu ]; + + # These tags and flags are copied from build-release.sh + buildFlags = [ "-tags" ]; + buildFlagsArray = [ + "most" + "sqlite_app_armor" + "sqlite_fts5" + "sqlite_introspect" + "sqlite_json1" + "sqlite_stat4" + "sqlite_userauth" + "sqlite_vtable" + "sqlite_icu" + "no_adodb" + ]; + + ldflags = [ + "-s" + "-w" + "-X github.com/xo/usql/text.CommandVersion=${version}" + ]; + + # All the checks currently require docker instances to run the databases. + doCheck = false; + + meta = with lib; { + description = "Universal command-line interface for SQL databases"; + homepage = "https://github.com/xo/usql"; + license = licenses.mit; + maintainers = with maintainers; [ georgyo ]; + # usql does not build on ARM. + platforms = [ "x86_64-linux" "x86_64-darwin" ]; + }; + +} diff --git a/third_party/nixpkgs/pkgs/applications/misc/variety/default.nix b/third_party/nixpkgs/pkgs/applications/misc/variety/default.nix index 2366d04b9c..5e7765a16f 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/variety/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/variety/default.nix @@ -10,6 +10,7 @@ , hicolor-icon-theme , librsvg , wrapGAppsHook +, makeWrapper }: with python37Packages; @@ -27,10 +28,14 @@ buildPythonApplication rec { nativeBuildInputs = [ intltool wrapGAppsHook ]; - buildInputs = [ distutils_extra ]; + buildInputs = [ makeWrapper distutils_extra ]; doCheck = false; + postInstall = '' + wrapProgram $out/bin/variety --suffix XDG_DATA_DIRS : ${gtk3}/share/gsettings-schemas/${gtk3.name}/ + ''; + prePatch = '' substituteInPlace variety_lib/varietyconfig.py \ --replace "__variety_data_directory__ = \"../data\"" "__variety_data_directory__ = \"$out/share/variety\"" @@ -76,7 +81,7 @@ buildPythonApplication rec { blur, as well as options to layer quotes and a clock onto the background. ''; license = licenses.gpl3; - maintainers = with maintainers; [ AndersonTorres zfnmxt ]; + maintainers = with maintainers; [ p3psi AndersonTorres zfnmxt ]; platforms = with platforms; linux; }; } diff --git a/third_party/nixpkgs/pkgs/applications/misc/veracrypt/default.nix b/third_party/nixpkgs/pkgs/applications/misc/veracrypt/default.nix index 5e5fda23d4..33d0da5c93 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/veracrypt/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/veracrypt/default.nix @@ -1,29 +1,39 @@ -{ lib, stdenv, fetchurl, fetchpatch, pkg-config, makeself, yasm, fuse, wxGTK, lvm2 }: +{ lib +, stdenv +, fetchurl +, pkg-config +, makeself +, yasm +, fuse +, wxGTK +, lvm2 +, substituteAll +, e2fsprogs +, exfat +, ntfs3g +, btrfs-progs +}: with lib; stdenv.mkDerivation rec { pname = "veracrypt"; - version = "1.24-Hotfix1"; + version = "1.24-Update7"; src = fetchurl { url = "https://launchpad.net/${pname}/trunk/${toLower version}/+download/VeraCrypt_${version}_Source.tar.bz2"; - sha256 = "8b40ece805b216843d7a71b1a30069c4057931341b030bf65caace59263c5c8c"; + sha256 = "0i7h44zn2mjzgh416l7kfs0dk6qc7b1bxsaxqqqcvgrpl453n7bc"; }; - patches = [ - # https://github.com/veracrypt/VeraCrypt/issues/529 - fix build on non-x86 - (fetchpatch { - url = "https://github.com/veracrypt/VeraCrypt/commit/afe6b2f45b15393026a1159e5f3d165ac7d0b94a.patch"; - sha256 = "1xm9cl6zinlr0vah5xr9bvh0y9gw4331zl7d2n5xvqrcdxw3ww1y"; - stripLen = 1; - }) - # https://github.com/veracrypt/VeraCrypt/issues/529 - fix build on non-x86 - (fetchpatch { - url = "https://github.com/veracrypt/VeraCrypt/commit/3fa636d477119fff6e372074568edb42d038f508.patch"; - sha256 = "0qsccilip0ksnlzxina38a052gb533r4s422lxhrj3wv9zgpp7l3"; - stripLen = 1; + (substituteAll { + src = ./fix-paths.patch; + ext2 = "${e2fsprogs}/bin/mkfs.ext2"; + ext3 = "${e2fsprogs}/bin/mkfs.ext3"; + ext4 = "${e2fsprogs}/bin/mkfs.ext4"; + exfat = "${exfat}/bin/mkfs.exfat"; + ntfs = "${ntfs3g}/bin/mkfs.ntfs"; + btrfs = "${btrfs-progs}/bin/mkfs.btrfs"; }) ]; diff --git a/third_party/nixpkgs/pkgs/applications/misc/veracrypt/fix-paths.patch b/third_party/nixpkgs/pkgs/applications/misc/veracrypt/fix-paths.patch new file mode 100644 index 0000000000..56b4fc4838 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/veracrypt/fix-paths.patch @@ -0,0 +1,22 @@ +diff --color --unified --recursive --text a/Core/VolumeCreator.h b/Core/VolumeCreator.h +--- a/Core/VolumeCreator.h 2021-06-20 20:54:50.725210056 +0300 ++++ b/Core/VolumeCreator.h 2021-06-20 20:58:46.117742419 +0300 +@@ -77,12 +77,12 @@ + switch (fsType) + { + #if defined (TC_LINUX) +- case VolumeCreationOptions::FilesystemType::Ext2: return "mkfs.ext2"; +- case VolumeCreationOptions::FilesystemType::Ext3: return "mkfs.ext3"; +- case VolumeCreationOptions::FilesystemType::Ext4: return "mkfs.ext4"; +- case VolumeCreationOptions::FilesystemType::NTFS: return "mkfs.ntfs"; +- case VolumeCreationOptions::FilesystemType::exFAT: return "mkfs.exfat"; +- case VolumeCreationOptions::FilesystemType::Btrfs: return "mkfs.btrfs"; ++ case VolumeCreationOptions::FilesystemType::Ext2: return "@ext2@"; ++ case VolumeCreationOptions::FilesystemType::Ext3: return "@ext3@"; ++ case VolumeCreationOptions::FilesystemType::Ext4: return "@ext4@"; ++ case VolumeCreationOptions::FilesystemType::NTFS: return "@ntfs@"; ++ case VolumeCreationOptions::FilesystemType::exFAT: return "@exfat@"; ++ case VolumeCreationOptions::FilesystemType::Btrfs: return "@btrfs@"; + #elif defined (TC_MACOSX) + case VolumeCreationOptions::FilesystemType::MacOsExt: return "newfs_hfs"; + case VolumeCreationOptions::FilesystemType::exFAT: return "newfs_exfat"; diff --git a/third_party/nixpkgs/pkgs/applications/misc/visidata/default.nix b/third_party/nixpkgs/pkgs/applications/misc/visidata/default.nix index ad49a1b291..9663d09304 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/visidata/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/visidata/default.nix @@ -1,17 +1,26 @@ -{ buildPythonApplication +{ stdenv , lib +, buildPythonApplication , fetchFromGitHub , dateutil -, pyyaml +, pandas +, requests +, lxml , openpyxl , xlrd , h5py -, fonttools -, lxml -, pandas +, psycopg2 , pyshp +, fonttools +, pyyaml +, pdfminer +, vobject +, tabulate +, wcwidth +, zstandard , setuptools -, withPcap ? true, dpkt ? null, dnslib ? null +, git +, withPcap ? true, dpkt, dnslib }: buildPythonApplication rec { pname = "visidata"; @@ -25,19 +34,62 @@ buildPythonApplication rec { }; propagatedBuildInputs = [ + # from visidata/requirements.txt + # packages not (yet) present in nixpkgs are commented dateutil - pyyaml + pandas + requests + lxml openpyxl xlrd h5py - fonttools - lxml - pandas + psycopg2 pyshp + #mapbox-vector-tile + #pypng + fonttools + #sas7bdat + #xport + #savReaderWriter + pyyaml + #namestand + #datapackage + pdfminer + #tabula + vobject + tabulate + wcwidth + zstandard setuptools ] ++ lib.optionals withPcap [ dpkt dnslib ]; - doCheck = false; + checkInputs = [ + git + ]; + + # check phase uses the output bin, which is not possible when cross-compiling + doCheck = stdenv.buildPlatform == stdenv.hostPlatform; + + checkPhase = '' + # disable some tests which require access to the network + rm tests/load-http.vd # http + rm tests/graph-cursor-nosave.vd # http + rm tests/messenger-nosave.vd # dns + + # disable some tests which expect Python == 3.6 (not our current version) + # see https://github.com/saulpw/visidata/issues/1014 + rm tests/describe.vd + rm tests/describe-error.vd + rm tests/edit-type.vd + + # tests use git to compare outputs to references + git init -b "test-reference" + git config user.name "nobody"; git config user.email "no@where" + git add .; git commit -m "test reference" + + substituteInPlace dev/test.sh --replace "bin/vd" "$out/bin/vd" + bash dev/test.sh + ''; meta = { inherit version; diff --git a/third_party/nixpkgs/pkgs/applications/misc/vul/default.nix b/third_party/nixpkgs/pkgs/applications/misc/vul/default.nix new file mode 100644 index 0000000000..9acefa9394 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/misc/vul/default.nix @@ -0,0 +1,24 @@ +{ lib, stdenv, fetchFromGitHub }: + +stdenv.mkDerivation rec { + pname = "vul"; + version = "unstable-2020-02-15"; + + src = fetchFromGitHub { + owner = "LukeSmithxyz"; + repo = pname; + rev = "f6ebd8f6b6fb8a111e7b59470d6748fcbe71c559"; + sha256 = "aUl4f82sGOWkEvTDNILDszj5hztDRvYpHVovFl4oOCc="; + }; + + makeFlags = [ + "PREFIX=${placeholder "out"}" + ]; + + meta = with lib; { + description = "Latin Vulgate Bible on the Command Line"; + homepage = "https://github.com/LukeSmithxyz/vul"; + license = licenses.publicDomain; + maintainers = [ maintainers.j0hax ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/misc/xplr/default.nix b/third_party/nixpkgs/pkgs/applications/misc/xplr/default.nix index 6bd2c60b09..7d7df0ae8b 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/xplr/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/xplr/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "xplr"; - version = "0.13.1"; + version = "0.14.3"; src = fetchCrate { inherit pname version; - sha256 = "1aanw0l8b4ak0kikkixmb817qw48ypviq9dxdivzwc29rjvgp152"; + sha256 = "012wyl6qvwca5r8kqf8j7r50r1lbv802c90m13xb7rqyb6jjfv0m"; }; buildInputs = lib.optional stdenv.isDarwin libiconv; - cargoSha256 = "16iaj1pqvqwi0rq4k3lmqwd8skbjf55133ri69hj26gz88k4q43w"; + cargoSha256 = "1mgi7hxsn9wajxr78kr3n4g7fa0rwp4riah8dq06cqwjlh0pkfjd"; meta = with lib; { description = "A hackable, minimal, fast TUI file explorer"; diff --git a/third_party/nixpkgs/pkgs/applications/misc/xsuspender/default.nix b/third_party/nixpkgs/pkgs/applications/misc/xsuspender/default.nix index 93e56f1df2..c09c9329aa 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/xsuspender/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/xsuspender/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, cmake, makeWrapper, pkg-config -, glib, libwnck3, procps }: +, glib, libwnck, procps }: with lib; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { outputs = [ "out" "man" "doc" ]; nativeBuildInputs = [ cmake pkg-config makeWrapper ]; - buildInputs = [ glib libwnck3 ]; + buildInputs = [ glib libwnck ]; postInstall = '' wrapProgram $out/bin/xsuspender \ diff --git a/third_party/nixpkgs/pkgs/applications/misc/yambar/default.nix b/third_party/nixpkgs/pkgs/applications/misc/yambar/default.nix index 47d02a0cec..375b802d5c 100644 --- a/third_party/nixpkgs/pkgs/applications/misc/yambar/default.nix +++ b/third_party/nixpkgs/pkgs/applications/misc/yambar/default.nix @@ -5,7 +5,7 @@ , meson , ninja , scdoc -, alsaLib +, alsa-lib , fcft , json_c , libmpdclient @@ -34,7 +34,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config meson ninja scdoc ]; buildInputs = [ - alsaLib + alsa-lib fcft json_c libmpdclient diff --git a/third_party/nixpkgs/pkgs/applications/networking/appgate-sdp/default.nix b/third_party/nixpkgs/pkgs/applications/networking/appgate-sdp/default.nix index e9e22741c4..e894572dd7 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/appgate-sdp/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/appgate-sdp/default.nix @@ -1,16 +1,14 @@ -{ alsaLib +{ alsa-lib , at-spi2-atk , at-spi2-core , atk -, bash +, autoPatchelfHook , cairo -, coreutils , cups , curl , dbus , dnsmasq , dpkg -, e2fsprogs , expat , fetchurl , gdk-pixbuf @@ -20,25 +18,14 @@ , iproute2 , krb5 , lib -, mesa , libdrm -, libX11 -, libXScrnSaver -, libXcomposite -, libXcursor -, libXdamage -, libXext -, libXfixes -, libXi -, libXrandr -, libXrender -, libXtst -, libxkbcommon , libsecret , libuuid , libxcb +, libxkbcommon , lttng-ust , makeWrapper +, mesa , networkmanager , nspr , nss @@ -50,12 +37,13 @@ , stdenv , systemd , xdg-utils +, xorg , zlib }: with lib; let deps = [ - alsaLib + alsa-lib at-spi2-atk at-spi2-core atk @@ -69,46 +57,48 @@ let gtk3 icu krb5 - mesa libdrm - libX11 - libXScrnSaver - libXcomposite - libXcursor - libXdamage - libXext - libXfixes - libXi - libXrandr - libXrender - libXtst - libxkbcommon libsecret libuuid libxcb + libxkbcommon lttng-ust + mesa nspr nss openssl pango stdenv.cc.cc systemd + xorg.libX11 + xorg.libXScrnSaver + xorg.libXcomposite + xorg.libXcursor + xorg.libXdamage + xorg.libXext + xorg.libXfixes + xorg.libXi + xorg.libXrandr + xorg.libXrender + xorg.libXtst + xorg.libxkbfile + xorg.libxshmfence zlib ]; - rpath = lib.makeLibraryPath deps; in stdenv.mkDerivation rec { pname = "appgate-sdp"; - version = "5.4.0"; + version = "5.4.2"; src = fetchurl { - url = "https://bin.appgate-sdp.com/${lib.versions.majorMinor version}/client/appgate-sdp_${version}_amd64.deb"; - sha256 = "sha256-2DzZ5JnFGBeaHtDf7CAXb/qv6kVI+sYMW5Nc25E3eNA="; + url = "https://bin.appgate-sdp.com/${versions.majorMinor version}/client/appgate-sdp_${version}_amd64.deb"; + sha256 = "sha256-wAhcTRO/Cd4MG1lfPNDq92yGcu3NOfymucddy92VaXo="; }; + # just patch interpreter + autoPatchelfIgnoreMissingDeps = true; dontConfigure = true; dontBuild = true; - enableParallelBuilding = true; buildInputs = [ python37 @@ -116,6 +106,7 @@ stdenv.mkDerivation rec { ]; nativeBuildInputs = [ + autoPatchelfHook makeWrapper dpkg ]; @@ -125,62 +116,39 @@ stdenv.mkDerivation rec { ''; installPhase = '' - mkdir -p $out/bin - ln -s "$out/opt/appgate/appgate" "$out/bin/appgate" cp -r $out/usr/share $out/share - for file in $out/opt/appgate/linux/appgate-resolver.pre \ - $out/opt/appgate/linux/appgate-dumb-resolver.pre - do - substituteInPlace $file \ - --replace "/bin/sh" "${bash}/bin/sh" \ - --replace "cat" "${coreutils}/bin/cat" \ - --replace "chattr" "${e2fsprogs}/bin/chattr" \ - --replace "mv " "${coreutils}/bin/mv " \ - --replace "pkill" "${procps}/bin/pkill" - done - - for file in $out/lib/systemd/system/appgatedriver.service \ - $out/lib/systemd/system/appgate-dumb-resolver.service \ - $out/lib/systemd/system/appgate-resolver.service - do - substituteInPlace $file \ - --replace "/bin/sh" "${bash}/bin/sh" \ - --replace "/opt/" "$out/opt/" \ - --replace "chattr" "${e2fsprogs}/bin/chattr" \ - --replace "mv " "${coreutils}/bin/mv " - done + substituteInPlace $out/lib/systemd/system/appgate-dumb-resolver.service \ + --replace "/opt/" "$out/opt/" substituteInPlace $out/lib/systemd/system/appgatedriver.service \ + --replace "/opt/" "$out/opt/" \ --replace "InaccessiblePaths=/mnt /srv /boot /media" "InaccessiblePaths=-/mnt -/srv -/boot -/media" substituteInPlace $out/lib/systemd/system/appgate-resolver.service \ + --replace "/usr/sbin/dnsmasq" "${dnsmasq}/bin/dnsmasq" \ + --replace "/opt/" "$out/opt/" + + substituteInPlace $out/opt/appgate/linux/nm.py \ --replace "/usr/sbin/dnsmasq" "${dnsmasq}/bin/dnsmasq" - substituteInPlace $out/opt/appgate/linux/nm.py --replace "/usr/sbin/dnsmasq" "${dnsmasq}/bin/dnsmasq" - substituteInPlace $out/opt/appgate/linux/set_dns --replace "/etc/appgate.conf" "$out/etc/appgate.conf" + substituteInPlace $out/opt/appgate/linux/set_dns \ + --replace "/etc/appgate.conf" "$out/etc/appgate.conf" - ''; + wrapProgram $out/opt/appgate/service/createdump \ + --set LD_LIBRARY_PATH "${makeLibraryPath [ stdenv.cc.cc ]}" - postFixup = '' - find $out -type f -name "*.so" -exec patchelf --set-rpath '$ORIGIN:${rpath}' {} \; - for binary in $out/opt/appgate/appgate-driver \ - $out/opt/appgate/appgate \ - $out/opt/appgate/service/createdump \ - $out/opt/appgate/service/appgateservice.bin - do - patchelf --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" --set-rpath "$ORIGIN:$out/opt/appgate/service/:$out/opt/appgate/:${rpath}" $binary - done + wrapProgram $out/opt/appgate/appgate-driver \ + --prefix PATH : ${makeBinPath [ iproute2 networkmanager dnsmasq ]} \ + --set LD_LIBRARY_PATH $out/opt/appgate/service - # fail if there are missing dependencies - ldd $out/opt/appgate/appgate | grep -i 'not found' && exit 1 - ldd $out/opt/appgate/service/appgateservice.bin | grep -i 'not found' && exit 1 - ldd $out/opt/appgate/appgate-driver | grep -i 'not found' && exit 1 + makeWrapper $out/opt/appgate/Appgate $out/bin/appgate \ + --prefix PATH : ${makeBinPath [ xdg-utils ]} \ + --set LD_LIBRARY_PATH $out/opt/appgate:${makeLibraryPath deps} - wrapProgram $out/opt/appgate/appgate-driver --prefix PATH : ${lib.makeBinPath [ iproute2 networkmanager dnsmasq ]} wrapProgram $out/opt/appgate/linux/set_dns --set PYTHONPATH $PYTHONPATH - wrapProgram $out/bin/appgate --prefix PATH : ${lib.makeBinPath [ xdg-utils ]} ''; + meta = with lib; { description = "Appgate SDP (Software Defined Perimeter) desktop client"; homepage = "https://www.appgate.com/support/software-defined-perimeter-support"; @@ -189,3 +157,4 @@ stdenv.mkDerivation rec { maintainers = with maintainers; [ ymatsiuk ]; }; } + diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/angelfish/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/angelfish/default.nix index 7fb2703199..391993617d 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/angelfish/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/angelfish/default.nix @@ -20,17 +20,17 @@ mkDerivation rec { pname = "angelfish"; - version = "21.05"; + version = "21.06"; src = fetchurl { url = "mirror://kde/stable/plasma-mobile/${version}/angelfish-${version}.tar.xz"; - sha256 = "11jd5dwy0xa7kh5z5rc29xy3wfn20hm31908zjax4x83qqjrm075"; + sha256 = "sha256-iHgmG/DeaUPnRXlVIU8P/oUcYINienYmR2zI9Q4Yd3s="; }; cargoDeps = rustPlatform.fetchCargoTarball { inherit src; name = "${pname}-${version}"; - sha256 = "05xvh7yxndqm2bqpm06jsxiv4v02mqxaazll8wllp367qapvr21g"; + sha256 = "0zh0kli7kav18v9znq2f5jklhf3m1kyb41jzmivjx70g9xyfzlwk"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/bombadillo/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/bombadillo/default.nix index 5794bce31f..b07c526c0d 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/bombadillo/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/bombadillo/default.nix @@ -12,7 +12,7 @@ buildGoModule rec { nativeBuildInputs = [ installShellFiles ]; - vendorSha256 = "0sjjj9z1dhilhpc8pq4154czrb79z9cm044jvn75kxcjv6v5l2m5"; + vendorSha256 = null; outputs = [ "out" "man" ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/brave/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/brave/default.nix index feff2a74b1..7d5b437b0a 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/brave/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/brave/default.nix @@ -1,6 +1,6 @@ { stdenv, lib, fetchurl , dpkg -, alsaLib +, alsa-lib , at-spi2-atk , at-spi2-core , atk @@ -46,7 +46,7 @@ let rpath = lib.makeLibraryPath [ - alsaLib + alsa-lib at-spi2-atk at-spi2-core atk @@ -90,11 +90,11 @@ in stdenv.mkDerivation rec { pname = "brave"; - version = "1.25.68"; + version = "1.26.67"; src = fetchurl { url = "https://github.com/brave/brave-browser/releases/download/v${version}/brave-browser_${version}_amd64.deb"; - sha256 = "OBf42L6pctflNLjtcbnw2wKo7TisRSMF3SriDPFlB6I="; + sha256 = "Kg6ExXZYdSkyBoivu9h4blytHN9hOc4bUSuFR+1YZOY="; }; dontConfigure = true; diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/browser.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/browser.nix index dcac873b84..cc44376444 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/browser.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/browser.nix @@ -62,6 +62,8 @@ mkChromiumDerivation (base: rec { -e '/\[Desktop Entry\]/a\' \ -e 'StartupWMClass=chromium-browser' \ $out/share/applications/chromium-browser.desktop + '' + lib.optionalString (channel == "dev") '' + cp -v "$buildPath/crashpad_handler" "$libExecPath/" ''; passthru = { inherit sandboxExecutableName; }; diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/common.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/common.nix index 7e95da747d..18565f31a2 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/common.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/common.nix @@ -9,7 +9,7 @@ , python2, python3, perl, pkg-config , nspr, systemd, libkrb5 -, util-linux, alsaLib +, util-linux, alsa-lib , bison, gperf , glib, gtk3, dbus-glib , glibc @@ -54,9 +54,9 @@ let # source tree. extraAttrs = buildFun base; - githubPatch = commit: sha256: fetchpatch { + githubPatch = { commit, sha256, revert ? false }: fetchpatch { url = "https://github.com/chromium/chromium/commit/${commit}.patch"; - inherit sha256; + inherit sha256 revert; }; mkGnFlags = @@ -92,9 +92,10 @@ let }; defaultDependencies = [ + (libpng.override { apngSupport = false; }) # https://bugs.chromium.org/p/chromium/issues/detail?id=752403 bzip2 flac speex opusWithCustomModes libevent expat libjpeg snappy - libpng libcap + libcap xdg-utils minizip libwebp libusb1 re2 ffmpeg libxslt libxml2 @@ -144,7 +145,7 @@ let buildInputs = defaultDependencies ++ [ nspr nss systemd - util-linux alsaLib + util-linux alsa-lib bison gperf libkrb5 glib gtk3 dbus-glib libXScrnSaver libXcursor libXtst libxshmfence libGLU libGL @@ -166,6 +167,14 @@ let # Fix the build by adding a missing dependency (s. https://crbug.com/1197837): ./patches/fix-missing-atspi2-dependency.patch ./patches/closure_compiler-Use-the-Java-binary-from-the-system.patch + ] ++ lib.optionals (chromiumVersionAtLeast "93") [ + # We need to revert this patch to build M93 with LLVM 12. + (githubPatch { + # Reland "Replace 'blacklist' with 'ignorelist' in ./tools/msan/." + commit = "9d080c0934b848ee4a05013c78641e612fcc1e03"; + sha256 = "1bxdhxmiy6h4acq26lq43x2mxx6rawmfmlgsh5j7w8kyhkw5af0c"; + revert = true; + }) ]; postPatch = '' @@ -198,7 +207,7 @@ let substituteInPlace services/audio/audio_sandbox_hook_linux.cc \ --replace \ '/usr/share/alsa/' \ - '${alsaLib}/share/alsa/' \ + '${alsa-lib}/share/alsa/' \ --replace \ '/usr/lib/x86_64-linux-gnu/gconv/' \ '${glibc}/lib/gconv/' \ diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/get-commit-message.py b/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/get-commit-message.py index e14e364264..2768e31bd0 100755 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/get-commit-message.py +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/get-commit-message.py @@ -27,7 +27,7 @@ for entry in feed.entries: print('\n' + url) if fixes := re.search(r'This update includes .+ security fixes\.', content): fixes = html_tags.sub('', fixes.group(0)) - zero_days = re.search(r'Google is aware of reports that .+ in the wild\.', content) + zero_days = re.search(r'Google is aware( of reports)? that .+ in the wild\.', content) if zero_days: fixes += " " + zero_days.group(0) print('\n' + '\n'.join(textwrap.wrap(fixes, width=72))) diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/upstream-info.json b/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/upstream-info.json index 9762bcbbe9..bca947df47 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/upstream-info.json +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/chromium/upstream-info.json @@ -1,8 +1,8 @@ { "stable": { - "version": "91.0.4472.77", - "sha256": "0c8vj3gq3nmb7ssiwj6875g0a8hcprss1a4gqw9h7llqywza9ma5", - "sha256bin64": "0caf47xam5igdnbhipal1iyicnxxvadhi61k199rwysrvyv5sdad", + "version": "91.0.4472.114", + "sha256": "0wbyiwbdazgjjgj9vs56x26q3g9r80a57gfl0f2rfl1j7xwgxiy1", + "sha256bin64": "00ac1dyqxpxy1j11jvc5j35bgc629n2f2pll3912gzih4ir0vrys", "deps": { "gn": { "version": "2021-04-06", @@ -12,15 +12,15 @@ } }, "chromedriver": { - "version": "91.0.4472.19", - "sha256_linux": "0pg9y55644i87qxa0983lvfizbmfiak9bg9249xhifl5kykghrb2", - "sha256_darwin": "07v5k07100vrzsbm6r59xg8j80ffzs3gnnf2kcfgqrzprx284gf2" + "version": "91.0.4472.101", + "sha256_linux": "0dzx565z2rd0y4i57rv5kd7dsm69sffza96y3c773hqaghm4y1ng", + "sha256_darwin": "0nff1jmmrn6a4clfvhyzrhfp8hx85z72563jwk28apflqmnm0k68" } }, "beta": { - "version": "92.0.4515.40", - "sha256": "1v0vmnzdqq7d2rqp1sam8nk7z20xg5l9lnlpqjxj30y8k37gzh8p", - "sha256bin64": "0i3plysx51n2gsm5vbf9666rz73pqbbns7v09wznbbncvw9zngrf", + "version": "92.0.4515.70", + "sha256": "06yhpxr5bg0gx7hmrhc6zg4gr1d9s34y2rb98rpl4dilmc548i6q", + "sha256bin64": "1fkakh1r87pg5nr101m6v86y8iyyfba8vnzrg0229kcar7v8wzf7", "deps": { "gn": { "version": "2021-05-07", @@ -31,22 +31,22 @@ } }, "dev": { - "version": "93.0.4530.5", - "sha256": "0xxnn9fbwgmfk0zz5an35na1zprhas487pbg2qpgg76g50zxnsx5", - "sha256bin64": "14fzmfhaiish91byg7knr9nf2cigklfvy145vc7qhg17b6gzba25", + "version": "93.0.4549.3", + "sha256": "0bkr67n1d75ayd1d9sa57c99j85r83gadzfs8iw7kwiha9g0mjgp", + "sha256bin64": "1hac6m668nrdzvfqx3vyc74pnx8lf973m1jxnm3cfy83g7wynphz", "deps": { "gn": { - "version": "2021-05-07", + "version": "2021-06-18", "url": "https://gn.googlesource.com/gn", - "rev": "39a87c0b36310bdf06b692c098f199a0d97fc810", - "sha256": "0x63jr5hssm9dl6la4q5ahy669k4gxvbapqxi5w32vv107jrj8v4" + "rev": "170c2dba1e0c0299fe8c6a441caf2f2352a42ae0", + "sha256": "1ylx8a5fxq7aciqs0mx7fld763sqkqn39lb9k951w6gksm15lrn3" } } }, "ungoogled-chromium": { - "version": "91.0.4472.77", - "sha256": "0c8vj3gq3nmb7ssiwj6875g0a8hcprss1a4gqw9h7llqywza9ma5", - "sha256bin64": "0caf47xam5igdnbhipal1iyicnxxvadhi61k199rwysrvyv5sdad", + "version": "91.0.4472.114", + "sha256": "0wbyiwbdazgjjgj9vs56x26q3g9r80a57gfl0f2rfl1j7xwgxiy1", + "sha256bin64": "00ac1dyqxpxy1j11jvc5j35bgc629n2f2pll3912gzih4ir0vrys", "deps": { "gn": { "version": "2021-04-06", @@ -55,8 +55,8 @@ "sha256": "199xkks67qrn0xa5fhp24waq2vk8qb78a96cb3kdd8v1hgacgb8x" }, "ungoogled-patches": { - "rev": "91.0.4472.77-1", - "sha256": "1jfmmkw1y4rcjfgsm7b4v2lrgd3sks5qpajvq0djflbhkpsqxfk0" + "rev": "91.0.4472.114-1", + "sha256": "1xb5g3hybaiwn3y1zw1fxd3g0zwmvplrs06sdqnxzsr1qm8b874h" } } } diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix index 6d29a7bda9..d14d5b3215 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix @@ -1,965 +1,975 @@ { - version = "85.0b6"; + version = "90.0b6"; sources = [ - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/ach/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/ach/firefox-90.0b6.tar.bz2"; locale = "ach"; arch = "linux-x86_64"; - sha256 = "e6583b946d35db5b8d94bd33e183e397b85c6549a94961ec2cc395b30ba21b6b"; + sha256 = "07c06ddfe0b2d3f4acc89a8bd5de963ae8fb90aedb7710272adbccac178af867"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/af/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/af/firefox-90.0b6.tar.bz2"; locale = "af"; arch = "linux-x86_64"; - sha256 = "7f69bf9371454796ef6cc9469bf1ba6d6c7317a3e559fefafacb3c4d215eaa73"; + sha256 = "b01b6f591d815e2dd3c0bb129952a4a5dbfc7f93d9eed2d61b8c387135768462"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/an/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/an/firefox-90.0b6.tar.bz2"; locale = "an"; arch = "linux-x86_64"; - sha256 = "02ce58a9be06d2632e87daeb0e832d18e896c0ae376171d0d265d108530bf8ed"; + sha256 = "aebbf9e5edce5aa4a01b3dea5342d2335dadca261124f9557d727a2f03c5a123"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/ar/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/ar/firefox-90.0b6.tar.bz2"; locale = "ar"; arch = "linux-x86_64"; - sha256 = "04021d925774cfb01141f34a28800e339339f1b056255721d2c4aa4268156986"; + sha256 = "842c29a5aa563d1f386ed74820ba2cce763e86f8d86a943295b959a51bd8bf27"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/ast/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/ast/firefox-90.0b6.tar.bz2"; locale = "ast"; arch = "linux-x86_64"; - sha256 = "a85bc2a3c859b9b6e005c1cc5767f1519d255fac011208563c530d28bcec8935"; + sha256 = "8fe01d2193b4d60ce2134ebc5848abf6621cc49bc76d08890ce7588ac2d81311"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/az/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/az/firefox-90.0b6.tar.bz2"; locale = "az"; arch = "linux-x86_64"; - sha256 = "d84113f01e450d76eccb1f464a3e6a44c3b5fd604c74891d175f0f7565c3b911"; + sha256 = "e5a929e0eb95a09ec408aa831853b1a5859bb0b1f3b133677568f18bc7ba5a31"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/be/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/be/firefox-90.0b6.tar.bz2"; locale = "be"; arch = "linux-x86_64"; - sha256 = "a2826a554577a666b337d95f2c46b292fbb228152282799f295994cb9f6b6563"; + sha256 = "32533dc55222e7e407b386f46d55ae78dc61581ec7653bbe9f8e9859b4d191ce"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/bg/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/bg/firefox-90.0b6.tar.bz2"; locale = "bg"; arch = "linux-x86_64"; - sha256 = "c88db099ee75755d0e60cb8230731be9fafbf5ca3c0a6d0be232cfe1f93523eb"; + sha256 = "2d561a690d625cfff4fe163dda26eac5424e89b74bd6385543238c9e85abf39b"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/bn/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/bn/firefox-90.0b6.tar.bz2"; locale = "bn"; arch = "linux-x86_64"; - sha256 = "625377e2bb881aeac0659600def64039bbc1c8518c99acd102f9e47dc956af0d"; + sha256 = "3cec173b9c23137d935221d715bfeb87353bc87bd316a219c8063b5977422bc8"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/br/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/br/firefox-90.0b6.tar.bz2"; locale = "br"; arch = "linux-x86_64"; - sha256 = "5fd3c63066e098dc87337c6e4fb53aede9c9d817e1bc06b1fe11597d68f60f3a"; + sha256 = "ab9bd15850209de8d7ad1ef33f50c132babc2c6e70b4ceddee84081f2707b6ab"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/bs/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/bs/firefox-90.0b6.tar.bz2"; locale = "bs"; arch = "linux-x86_64"; - sha256 = "85745ac8ae54b559592430744ce3a08566c1b20a078b961988870e570dba6eba"; + sha256 = "9f9c87c0bf0a08c23dc30b29bcfb79634a52dccfa945a4593451f6230e373686"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/ca-valencia/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/ca-valencia/firefox-90.0b6.tar.bz2"; locale = "ca-valencia"; arch = "linux-x86_64"; - sha256 = "5ddd2c3244311bb975e510cefeb1c5e16f92de2d82ef7fd3f6cb6bc064fd70ef"; + sha256 = "21900bc7c61ebbf34f45da1b4740a722e00d6c0d27042a89e006fd99485e7b60"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/ca/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/ca/firefox-90.0b6.tar.bz2"; locale = "ca"; arch = "linux-x86_64"; - sha256 = "e1d4f0ee1a72ea956966b07c3c48fcd089f5540ea1bf02857f41f125a9ab8762"; + sha256 = "6ccec2ac83ab36fb72a8db9293622d7b1c6fe55d1fb8ec6421a64e1210e7e0a1"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/cak/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/cak/firefox-90.0b6.tar.bz2"; locale = "cak"; arch = "linux-x86_64"; - sha256 = "519c50b7994b0d2bb3c162812424188958a51bdfe40d382db2e83912fb893484"; + sha256 = "7610d94fa66da37689abd3fa79e0703d77f68457c77287e5e61e66169baf7473"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/cs/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/cs/firefox-90.0b6.tar.bz2"; locale = "cs"; arch = "linux-x86_64"; - sha256 = "37aeebb7dcd6240721c7377368751f2c48b3492846ef72d09e3fb5146db0cf5f"; + sha256 = "6241b68e5618b474b86529222f5a646f426983eb9e39b2a4d7c3d261cd26f4e2"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/cy/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/cy/firefox-90.0b6.tar.bz2"; locale = "cy"; arch = "linux-x86_64"; - sha256 = "5902520410a45eacf141c9f8c414994298ec108ed0d97096f34156001373dccb"; + sha256 = "b981946aec3128a3e7da3ca76f7815373dc8963ed01d495ee02941954ca42fca"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/da/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/da/firefox-90.0b6.tar.bz2"; locale = "da"; arch = "linux-x86_64"; - sha256 = "787a26c9f978643e6afaf9dadd88f7adbc18f6d8f6b5814da4752c21faac4078"; + sha256 = "c59f28aef1af64d1cf83e0e5e9ba4bd15be593da27e88e6ea7edaed80a3a64b5"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/de/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/de/firefox-90.0b6.tar.bz2"; locale = "de"; arch = "linux-x86_64"; - sha256 = "09f5f3edfca2b082ad6f96ecf7b97d336d81c3d63bf1588bc2f38ff91e2d641c"; + sha256 = "b9cd59a9b7ca024f6931d8e25962349346d8c279d3c7983f1a76681784c38efc"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/dsb/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/dsb/firefox-90.0b6.tar.bz2"; locale = "dsb"; arch = "linux-x86_64"; - sha256 = "eef50a2a7b0109b62202922041dea12beea346e98fcd8d93f402ba7f08546dff"; + sha256 = "e185f4b874beeacca38bfde59958eb277ce83fcf47eee4cc16065e350707e52d"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-x86_64/el/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-x86_64/el/firefox-90.0b6.tar.bz2"; locale = "el"; arch = "linux-x86_64"; - sha256 = "5ed270355c3fca3d8ce2ba15e2b9a322fa503339ef46c935851442523f91c277"; + sha256 = "ed323fc4a677afa40b1073640dc3fe9e5f49906842684677694a1c85d042c988"; 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locale = "rm"; arch = "linux-i686"; - sha256 = "71ad541e5c119f05cea1ef6a730f860025d105112907f8dc6ba2a4d33f8efcd9"; + sha256 = "9a77df59be3a58f7ba75951f38461ac366afeb22a936c01562a01d509792ecbb"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/ro/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/ro/firefox-90.0b6.tar.bz2"; locale = "ro"; arch = "linux-i686"; - sha256 = "d699396c833a48bab753a76456e653d90e62a0585a9c9ee9ffdc6b30d8958778"; + sha256 = "baf15728a07ba2ce73213edbc486cd060a95e9722867e129b4dcaa5b7dbdc20e"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/ru/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/ru/firefox-90.0b6.tar.bz2"; locale = "ru"; arch = "linux-i686"; - sha256 = "6bc991fd34ec649da0e85e5959197db7e92e2b52cd9b5b3abc3d631ec5cf5bd2"; + sha256 = "201bfd1905918fde0134abff649e4153639d42beefca8e5cf695db13305c4869"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/si/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/si/firefox-90.0b6.tar.bz2"; locale = "si"; arch = "linux-i686"; - sha256 = "11de780455b3cca25ab64a58f3da00062fc29ef43973ab0d34435bb99463c23d"; + sha256 = "9a8b35abf95cedd5bd8c777e45dc412df76c5ab135fdffce1136f4d5400c4b5f"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/sk/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/sk/firefox-90.0b6.tar.bz2"; locale = "sk"; arch = "linux-i686"; - sha256 = "773964f567fd6df114795d3f362e553664d028f5d6ef7bed5852397852f5412e"; + sha256 = "371fc35135170674b3560a7472b479473c5f989d041c87cd030f8798861f1c2e"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/sl/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/sl/firefox-90.0b6.tar.bz2"; locale = "sl"; arch = "linux-i686"; - sha256 = "284f486353dc7dd57f3dcdcc82314cb491f7a37d8aee04b2d35982f0bf9bbb0f"; + sha256 = "77df5a99a9577a3a07bb0f034a99f96afa85cb4b05200f56c41a3da2283a93f6"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/son/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/son/firefox-90.0b6.tar.bz2"; locale = "son"; arch = "linux-i686"; - sha256 = "e1ca542f40f91b69743ce53ba001e6b10b55a57701ad6354f025f0f6a2a66727"; + sha256 = "5b72f4757d23c78e2f6ed33ba7afc99b09478d434b6d85b453f980d6a183fabb"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/sq/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/sq/firefox-90.0b6.tar.bz2"; locale = "sq"; arch = "linux-i686"; - sha256 = "8796aa6b9641a33558f4aa2c55cd425fcc9fe7e7c08fa7de2bb68341e337944f"; + sha256 = "f44f53326face336bebe48657abec77444fbeaf90c82ea57a596465f0fa2e87f"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/sr/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/sr/firefox-90.0b6.tar.bz2"; locale = "sr"; arch = "linux-i686"; - sha256 = "a4aa9131f1cd1aadb550f6ca312e490142c4caaeb6cf9d3f2e81699bd9050f0d"; + sha256 = "5a284e9d3afc91691a2f4cc9454f8f113a2385db8e93cf243717e18755a066ce"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/sv-SE/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/sv-SE/firefox-90.0b6.tar.bz2"; locale = "sv-SE"; arch = "linux-i686"; - sha256 = "995863c51f9f91f3667f3927b7135e995d47b2ebf5bb4d8ccab28b0825af41be"; + sha256 = "b2abb070d7d89d0fff19b9ba293961d863547da558804c9ee853ba280cab5524"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/ta/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/szl/firefox-90.0b6.tar.bz2"; + locale = "szl"; + arch = "linux-i686"; + sha256 = "a6a8233e17ecdc236c6741286272fb79148d30b86876d348097f93733937bfcb"; + } + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/ta/firefox-90.0b6.tar.bz2"; locale = "ta"; arch = "linux-i686"; - sha256 = "e0318bf4e87f2bafa43939fe3931b626501fbb5bbb91db5b50b71d946332a66d"; + sha256 = "723d94602a9914c1d572f85635ceb2622960b09bfdc99d4ae010efd1f65e4792"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/te/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/te/firefox-90.0b6.tar.bz2"; locale = "te"; arch = "linux-i686"; - sha256 = "0c1420ce0e3c4abdfe2ccbdacd1632c619438e84faa2cf29efead3a74ab437c4"; + sha256 = "78e0ed7271171c5eaed2831ed56afb98b525f8ae4cd9db78f6e5b2c6830b5c87"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/th/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/th/firefox-90.0b6.tar.bz2"; locale = "th"; arch = "linux-i686"; - sha256 = "db256f39058d8e6e8d8301ac0ee435ff41b1c547b9357f99c91c8de325da9298"; + sha256 = "4d06b6cf8b81e39875f6b749286cc52d89d8c172e8a8af54f920906326404346"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/tl/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/tl/firefox-90.0b6.tar.bz2"; locale = "tl"; arch = "linux-i686"; - sha256 = "fa02d3cc5fdd6512b84e04a27e0af95b01986403f16abc04484dbfe873fce537"; + sha256 = "9880b5fb724522d823fdbad3aea4c9b1376e9d97543ad47071a7438aef164b1c"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/tr/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/tr/firefox-90.0b6.tar.bz2"; locale = "tr"; arch = "linux-i686"; - sha256 = "3a936bfe9b169dbb4f02f5984df1ccd0c37f19c7f83c05a56fbdb8ed3b6009eb"; + sha256 = "b198c6491a3618c0dc437cfef06c4564a8b70700b399013072201bbf003b2b37"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/trs/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/trs/firefox-90.0b6.tar.bz2"; locale = "trs"; arch = "linux-i686"; - sha256 = "b995caf1c8128d8b6b60819d0ddcc3016f4247cf83cebe8c3aa2d1747f6520f5"; + sha256 = "f35c3b4a04742ad4e500fd60a5d6f80147e19b60d6ba1464c7df62707a8dcc19"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/uk/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/uk/firefox-90.0b6.tar.bz2"; locale = "uk"; arch = "linux-i686"; - sha256 = "e4f53e17928fdaa1d85c8272079e5717fb9c443dc2659ac08d95524703883e2a"; + sha256 = "d3c2b7e536438e8d212c66463bb201475c1df143a040617aaeb08cc14e6962eb"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/ur/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/ur/firefox-90.0b6.tar.bz2"; locale = "ur"; arch = "linux-i686"; - sha256 = "84e7d6e01a570df7ef4b616e075cb93d1fc7fcd5da0a3adec179e99363ee5f92"; + sha256 = "c708a6886f3a22ec5ef66d9c3d26e051d153fea4ff01fceb65ac41cf090173e8"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/uz/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/uz/firefox-90.0b6.tar.bz2"; locale = "uz"; arch = "linux-i686"; - sha256 = "15bb01ebaab8ed4f022829b9bf7f16e2fb5fe90e5ca47e300e2cb2ccd66d922d"; + sha256 = "e26ab71962c17774721bc54bb612f963c61b3b5fb83f5c1473a84157c73c28bb"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/vi/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/vi/firefox-90.0b6.tar.bz2"; locale = "vi"; arch = "linux-i686"; - sha256 = "a8fc45cc1ffc151414621d8e4f36ead409582e298f7e86bc2943ed6f20dd7f90"; + sha256 = "fc8d824190bec7889618e14cc439f6b96e878acec171ef270e54980000cb60d5"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/xh/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/xh/firefox-90.0b6.tar.bz2"; locale = "xh"; arch = "linux-i686"; - sha256 = "ac0089e7ce04b218eae0ce40245a75626523035218cdc7ca2551a9af8a18d33b"; + sha256 = "ef932683f2b7eb51b043ac7c2b9dc1ffef3e048f3a92a5abc65550743e95440b"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/zh-CN/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/zh-CN/firefox-90.0b6.tar.bz2"; locale = "zh-CN"; arch = "linux-i686"; - sha256 = "eacf3a23fde07908effacbba3cc346d1e9af088ffde81711e3ab3e087bd86e6b"; + sha256 = "9e2695711d611ace940d8f6dcce037646bd96f0d0a533d551b73eb1adaa31b98"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/85.0b6/linux-i686/zh-TW/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/90.0b6/linux-i686/zh-TW/firefox-90.0b6.tar.bz2"; locale = "zh-TW"; arch = "linux-i686"; - sha256 = "e31a9683560465fa6bc97edc46c42071431d62ba4a55f5f066d58ea60613990e"; + sha256 = "dbb0f78780deef67bfed9c1a126ec296657f327ce3a72beabcea0bbb9a033be3"; } ]; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/default.nix index fc70299333..725205c5c2 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, config, wrapGAppsHook -, alsaLib +, alsa-lib , atk , cairo , curl @@ -93,7 +93,7 @@ stdenv.mkDerivation { libPath = lib.makeLibraryPath [ stdenv.cc.cc - alsaLib + alsa-lib atk cairo curl diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix index a3c60e2578..619b6186b4 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/devedition_sources.nix @@ -1,965 +1,975 @@ { - version = "85.0b6"; + version = "90.0b6"; sources = [ - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-x86_64/ach/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-x86_64/ach/firefox-90.0b6.tar.bz2"; locale = "ach"; arch = "linux-x86_64"; - sha256 = "eed87dd1f8683805d13f5d42f8d376ccc760c6c96b7b049ac6d5514e00122722"; + sha256 = "20c33b145287c4477e6516837c7bd763f0895750e40400e82ddb6f196b072b23"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-x86_64/af/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-x86_64/af/firefox-90.0b6.tar.bz2"; locale = "af"; arch = "linux-x86_64"; - sha256 = "233e9d412982933e2880d2c9b790d56cfdf15b1d55e8ee1f0819ec445faca451"; + sha256 = "edebcfa2f2c8a7af69d8d98ec4890d6ce8404f93d8e21a7d643458d769056286"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-x86_64/an/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-x86_64/an/firefox-90.0b6.tar.bz2"; 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locale = "rm"; arch = "linux-i686"; - sha256 = "dd57277dda625c767ed7e0f3ac15b5597f1b17c862f33724a300589bc760bbd5"; + sha256 = "eea1dd966c8f4264616b89183a732f7c551c30c999c7bc95e3a6952c6ed667c1"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/ro/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/ro/firefox-90.0b6.tar.bz2"; locale = "ro"; arch = "linux-i686"; - sha256 = "c5bcce6dc1dffe36a02b473bc100bab080991dbc85a92b5606c4b1d440a6bae1"; + sha256 = "1f472eab1edacbd4f94e5120a32ecd51b4ec507108b516a244582e0a6f177669"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/ru/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/ru/firefox-90.0b6.tar.bz2"; locale = "ru"; arch = "linux-i686"; - sha256 = "1635583bed89c8efc3cccf6ccd294b2795defcdebac8d2faa2d0adb863200910"; + sha256 = "0cc517ed918facc26e76159b744b28397536736db641a45ac5e11bef9cf9b3d9"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/si/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/si/firefox-90.0b6.tar.bz2"; locale = "si"; arch = "linux-i686"; - sha256 = "bf1d180a93b0d1c2c4a9a177b906db957fa92fd1e9afc070f208c48c65921f48"; + sha256 = "edb56422879227089c8093397464e24c641d7d76bfd71e2dd6fde7a8b7b2498e"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/sk/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/sk/firefox-90.0b6.tar.bz2"; locale = "sk"; arch = "linux-i686"; - sha256 = "3c06f3513ef00756d7aa09aff5acf7da408cc02567a8187f51d01a78f016f7ad"; + sha256 = "ca64ed30ae3d073b51c3dc82c841eec88a7fa3913e82243dd8f67078f0ec59b0"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/sl/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/sl/firefox-90.0b6.tar.bz2"; locale = "sl"; arch = "linux-i686"; - sha256 = "107db384d90cf468233ffaca01bc18e332d931dfe60ade299be3b788876479ba"; + sha256 = "ce5c1df3db5e819f309a757e37c764f75dffc2cbf8737a8953349283f98855c2"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/son/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/son/firefox-90.0b6.tar.bz2"; locale = "son"; arch = "linux-i686"; - sha256 = "75744dc4218b94400e480a30a93f697d5762e1d57e057ec5961ba76c0bbaa7f6"; + sha256 = "d1f5604c5204be5c6c5e323b1ffabb411051de8c31c1568cebb6cecda0c1a371"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/sq/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/sq/firefox-90.0b6.tar.bz2"; locale = "sq"; arch = "linux-i686"; - sha256 = "a02be173b477a7accc7eb3ba61f868baa6116b2f3b6c11fbf91544d37b8b3c96"; + sha256 = "805b77a1a561541e714c9ebaf23d0f5d50abb84766033e38056e0c528ac44d13"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/sr/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/sr/firefox-90.0b6.tar.bz2"; locale = "sr"; arch = "linux-i686"; - sha256 = "24397cab6c2f85bb59dae4b9b13136f4df73adc5d0ce1808615e96ca090b26c6"; + sha256 = "d9b5ca9b56132936391f0b56b3694dd741a6217f591acc7cecb73e947adac302"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/sv-SE/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/sv-SE/firefox-90.0b6.tar.bz2"; locale = "sv-SE"; arch = "linux-i686"; - sha256 = "3a10344dd08921246dc5ffc12e7bba8524bed0fa063ad0d369a9a3f3663ffc88"; + sha256 = "3b5aa0a8d598135a2bee5b9b7db478a106473f7708e24c89f103c8d67e233dec"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/ta/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/szl/firefox-90.0b6.tar.bz2"; + locale = "szl"; + arch = "linux-i686"; + sha256 = "6da4aef36fb8cd014e827a89a9ec9092c9d2005f493b29180048fe70688e8513"; + } + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/ta/firefox-90.0b6.tar.bz2"; locale = "ta"; arch = "linux-i686"; - sha256 = "c99dfb14a98f079a7275819bb1e7386eb1acbf9752cfa1a3c5dd7fd3b2d78cdd"; + sha256 = "972706bfdf85c74f7615222fd3dc15315fe9b339f2cf03509ea40461ffa09dc9"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/te/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/te/firefox-90.0b6.tar.bz2"; locale = "te"; arch = "linux-i686"; - sha256 = "ffa4a07accc7bd9515f67a8a2a7abb881b517b2c3fda5f5cf9a7399ff1aeab0d"; + sha256 = "5e92dbef162c8553868c321c604315af544fc5a157ad80bbb6cf0dfc1e049ed3"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/th/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/th/firefox-90.0b6.tar.bz2"; locale = "th"; arch = "linux-i686"; - sha256 = "d3c3539566237f9df3236d3850771c7589fc0af6367b20bb62df3b0417954278"; + sha256 = "2530799eca2427f2294b9020dacdd1360f12c07973627a4f27a1fd09fcee02c3"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/tl/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/tl/firefox-90.0b6.tar.bz2"; locale = "tl"; arch = "linux-i686"; - sha256 = "e5691a1dab9000bab76f516e77f8d846e4d6ba9eccb7ffce5da7685981263be2"; + sha256 = "ab71a1db5a1a1a77e52819b48322186a7b2425ccea4528aa68c286f76733b0cd"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/tr/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/tr/firefox-90.0b6.tar.bz2"; locale = "tr"; arch = "linux-i686"; - sha256 = "a165c58b79094f3c28f29bab43ea8d2921099148da2247d9c3829c468a066fac"; + sha256 = "f4816b4dcc0263451bfe4953c80ca9b2c19dcc882cd01523dee0fa95f8196db7"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/trs/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/trs/firefox-90.0b6.tar.bz2"; locale = "trs"; arch = "linux-i686"; - sha256 = "71a6466c49b1e4554ddca9798130425bf29de8ba22cb4204ee63df1399e15dd8"; + sha256 = "6dad8a06f75a64ea647b7eac9b211611048d46f6cb82c339eed09f26554e97e1"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/uk/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/uk/firefox-90.0b6.tar.bz2"; locale = "uk"; arch = "linux-i686"; - sha256 = "dccca6a7697d16203325c956cad9b7ccc39e45d87fe50fd0a864cb92cb33889c"; + sha256 = "ea5eb3e482eb51804a935266a91957c5969f0faacf7ea6fc3aaeb39e0b0d3dc4"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/ur/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/ur/firefox-90.0b6.tar.bz2"; locale = "ur"; arch = "linux-i686"; - sha256 = "b94b825f2b70775093042ee10e3ba140ddf4882f2c54a46379790195aa932920"; + sha256 = "3048627e8fa53fa379f5d1c3ec9ea70733aadee3a8a9ae35c75187f820024a1e"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/uz/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/uz/firefox-90.0b6.tar.bz2"; locale = "uz"; arch = "linux-i686"; - sha256 = "eeeaf926708997925ad80bb8d62d0bb8badf464d030bde97c62239f90f9566d9"; + sha256 = "9cd8711b5a188e7c3fc954b65bd08b4ecb3b827816652ae859d5e6a57a15ae5f"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/vi/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/vi/firefox-90.0b6.tar.bz2"; locale = "vi"; arch = "linux-i686"; - sha256 = "c465c1dd6e4df1011deefb9e75f778f000a2a48151d9447550f4ffa30da03400"; + sha256 = "89b09f5d295512e98fc374ee950a74aac041ecdde3bbad5cf42a07e5b3ae3ece"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/xh/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/xh/firefox-90.0b6.tar.bz2"; locale = "xh"; arch = "linux-i686"; - sha256 = "56420d01893a6ee9791f3984b4c8b676ffb0e300c734c9b90a8b2bfbbb3c3e44"; + sha256 = "925c0f9832d235aca22b0b26aef59f750f09d1d3ea2a391aab4087a44f743072"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/zh-CN/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/zh-CN/firefox-90.0b6.tar.bz2"; locale = "zh-CN"; arch = "linux-i686"; - sha256 = "d19e07a9120f3de2169614c3ffa3323dd2712903bdedff446ed2063ee54ba95f"; + sha256 = "3f8029b6f33a0954ea8d3029a5182b4b016356348d1a793f9f96261a5e7e6e99"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/85.0b6/linux-i686/zh-TW/firefox-85.0b6.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/90.0b6/linux-i686/zh-TW/firefox-90.0b6.tar.bz2"; locale = "zh-TW"; arch = "linux-i686"; - sha256 = "eefb93231e8603b69a793771f427de9f6520993744beb0f5de6bb1b06342b286"; + sha256 = "8d69eede16322268738bf8d4b75698a825391df1c06caa0ca2931555c832f124"; } ]; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/mozilla.asc b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/mozilla.asc deleted file mode 100644 index dc58eb8d56..0000000000 Binary files a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/mozilla.asc and /dev/null differ diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/release_sources.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/release_sources.nix index 136c2c4c71..08d928698e 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/release_sources.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/release_sources.nix @@ -1,975 +1,975 @@ { - version = "89.0"; + version = "89.0.1"; sources = [ - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-x86_64/ach/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-x86_64/ach/firefox-89.0.1.tar.bz2"; locale = "ach"; arch = "linux-x86_64"; - sha256 = "f55831518c6d1a590a48093a5737862418b543d3349c6fe0418d378cc78846d6"; + sha256 = "c3aef53650698b0787288ff519f6a277af0a0a8010b39602884c81fa7a7aec21"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-x86_64/af/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-x86_64/af/firefox-89.0.1.tar.bz2"; locale = "af"; arch = "linux-x86_64"; - sha256 = "a124ce560aabae43fa0fe7b5c2c88f286839bb01ef94185faae640ce8937afe6"; + sha256 = "c0d332895fdc0d9490ab437fbf7579ae583fd4df632072626a5b6884a5e32d0c"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-x86_64/an/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-x86_64/an/firefox-89.0.1.tar.bz2"; locale = "an"; arch = "linux-x86_64"; - sha256 = "f2624d37b96a23d447dc16ea8b8a627db2cb497945d0c4cbe20cc20570d579e3"; + sha256 = "f13cc741afbf2df7ce964d7cbff4c5e1786c0bfc70a899b0a41c949739e857c1"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-x86_64/ar/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-x86_64/ar/firefox-89.0.1.tar.bz2"; locale = "ar"; arch = "linux-x86_64"; - sha256 = "c01e143107753ea3363e6f8f0ca77c12f9f4803da342578c15c94554ca6d946d"; + sha256 = "cfd8e7fc3a3bd4802a8c500e36a5936853148258add8f28f7a846e589dc40340"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-x86_64/ast/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-x86_64/ast/firefox-89.0.1.tar.bz2"; locale = "ast"; arch = "linux-x86_64"; - sha256 = "d2bfb999bdb31daffee3774ba1f940a84ae5f4ca846a03852181b2ebb5ec9b10"; + sha256 = "6f3095de843fa761b6b277cefcfd9f21d2a13cba06ae8f73acc28d9593bdaa3f"; 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+ { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/th/firefox-89.0.1.tar.bz2"; locale = "th"; arch = "linux-i686"; - sha256 = "83c88f10bddd3ed8e1100bc57bebeeb4d0ccab30f2093813c6e121adb04be5e3"; + sha256 = "cba78c8646ecd92e54359d2a064bf7314f3d3e6789c53cbfe200af2786377d24"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-i686/tl/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/tl/firefox-89.0.1.tar.bz2"; locale = "tl"; arch = "linux-i686"; - sha256 = "3dd0c9dbb655c54db0b672ef3ca4b61bbe6a488185d92814e474da58b15ac7e5"; + sha256 = "055e3dcda6733a20588ad0daa8ac2b68406f5964965e2cd5d8a8b70350bc656d"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-i686/tr/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/tr/firefox-89.0.1.tar.bz2"; locale = "tr"; arch = "linux-i686"; - sha256 = "442f82197c929080e432817a7cfe42fafee2640799596ab5fcc55d4dd6e7a296"; + sha256 = "cd00f148489529d9ab3ad79da7a4d789408a08ac32bb21e01ab505826c7f2516"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-i686/trs/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/trs/firefox-89.0.1.tar.bz2"; locale = "trs"; arch = "linux-i686"; - sha256 = "98f10ccebd94fb4d0fd68bee80a691248e0033e1e33f03f97dcd9e3b3c602712"; + sha256 = "0e493794ffc3dc81e6e86863f2c1f8ae54194c638d087415668b7eb9e23fb344"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-i686/uk/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/uk/firefox-89.0.1.tar.bz2"; locale = "uk"; arch = "linux-i686"; - sha256 = "99cf2753defcec16447dc176b331ce6e6e70f66dacbc341e3f719cf9392d0acc"; + sha256 = "6effddaf16e4a16197eb9993ffc7d4ce33ba9c8b65906ec4a7d00d22d85956d1"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-i686/ur/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/ur/firefox-89.0.1.tar.bz2"; locale = "ur"; arch = "linux-i686"; - sha256 = "904484ad86e2e27d792b40aaa8a73857476c786cf500344305795bfbad87cba7"; + sha256 = "429c316967f0dc771e7028c2283b31cf3bf996bfec5d6a6cbc56dbb464752136"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-i686/uz/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/uz/firefox-89.0.1.tar.bz2"; locale = "uz"; arch = "linux-i686"; - sha256 = "b44a544c6f473a0b4d1c4b408d5fbde422199e23b3b85957b60d2eaf27351b2d"; + sha256 = "064a64280a5242522b6e94e575e3a36959c0308015ff111e73bce4d2e6e3dc45"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-i686/vi/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/vi/firefox-89.0.1.tar.bz2"; locale = "vi"; arch = "linux-i686"; - sha256 = "e4f5417a5e294ab2b38744a260280c1307c47b072aa78657ba1143020c26c778"; + sha256 = "9db7de20f5c05bf08094c406972de111b3a41e5ea491b5dff2bfedbd0ac0ce37"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-i686/xh/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/xh/firefox-89.0.1.tar.bz2"; locale = "xh"; arch = "linux-i686"; - sha256 = "39ce93e0459299d54a99c317d0dd8b01cb694a8140d5036f09e13d72887a8d6f"; + sha256 = "15ba3f945482600db96b829ecc76c497a5c6c0ee3db36d7bbb11a92b4e115fad"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-i686/zh-CN/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/zh-CN/firefox-89.0.1.tar.bz2"; locale = "zh-CN"; arch = "linux-i686"; - sha256 = "7f6ae88c4eda5fb7893e7b35f9ae04df658f78919fe3476ba78fe2460a2896ed"; + sha256 = "31f8ff9eaf88c57ddc4980c00c75da9aa9d47f0f67384a3059b5eeac91dbd7eb"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/89.0/linux-i686/zh-TW/firefox-89.0.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/89.0.1/linux-i686/zh-TW/firefox-89.0.1.tar.bz2"; locale = "zh-TW"; arch = "linux-i686"; - sha256 = "7e6db3c697021be17253b616d348e67df62ea3d86828af768881f67f4d340379"; + sha256 = "ceb7acf2489e92eb5b6dfa4bf0e08ff7a52d06d938191225f105ddeec6fae374"; } ]; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/update.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/update.nix index 018bf04cb5..a2fdb82ffe 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/update.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox-bin/update.nix @@ -26,7 +26,7 @@ in writeScript "update-${name}" '' HOME=`mktemp -d` export GNUPGHOME=`mktemp -d` - gpg --import ${./mozilla.asc} + gpg --receive-keys 14F26682D0916CDD81E37B6D61B7B526D98F0353 tmpfile=`mktemp` url=${baseUrl} diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/common.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/common.nix index e35fd6ca70..2d2073b80b 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/common.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/common.nix @@ -18,7 +18,7 @@ ## optional libraries -, alsaSupport ? stdenv.isLinux, alsaLib +, alsaSupport ? stdenv.isLinux, alsa-lib , pulseaudioSupport ? stdenv.isLinux, libpulseaudio , ffmpegSupport ? true , gtk3Support ? true, gtk2, gtk3, wrapGAppsHook @@ -116,7 +116,9 @@ let then overrideCC stdenv llvmPackages.clangUseLLVM else stdenv; - nss_pkg = if lib.versionOlder ffversion "83" then nss_3_53 else nss; + # Disable p11-kit support in nss until our cacert packages has caught up exposing CKA_NSS_MOZILLA_CA_POLICY + # https://github.com/NixOS/nixpkgs/issues/126065 + nss_pkg = if lib.versionOlder ffversion "83" then nss_3_53 else nss.override { useP11kit = false; }; # --enable-release adds -ffunction-sections & LTO that require a big amount of # RAM and the 32-bit memory space cannot handle that linking @@ -178,7 +180,7 @@ buildStdenv.mkDerivation ({ # https://groups.google.com/forum/#!msg/mozilla.dev.platform/o-8levmLU80/SM_zQvfzCQAJ nspr nss_pkg ] - ++ lib.optional alsaSupport alsaLib + ++ lib.optional alsaSupport alsa-lib ++ lib.optional pulseaudioSupport libpulseaudio # only headers are needed ++ lib.optional gtk3Support gtk3 ++ lib.optional gssSupport libkrb5 diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/packages.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/packages.nix index 1362844c37..16a17dde04 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/packages.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/packages.nix @@ -7,10 +7,10 @@ in rec { firefox = common rec { pname = "firefox"; - ffversion = "89.0"; + ffversion = "89.0.1"; src = fetchurl { url = "mirror://mozilla/firefox/releases/${ffversion}/source/firefox-${ffversion}.source.tar.xz"; - sha512 = "5089720feda15d054d0aa4c3bdeb84760314dadd6381d7360e688d8e396154868220c6315add650d8d2a42652cb8a9bfeb833885812ef0bd70a74ee58ad18aa3"; + sha512 = "67da387b3b6c5a110c83208f9a15d6064adf423bbebfb0fcad2d85f6c4b615b27da0cbd5486b817f0d5e040bc3e70d74d9af72599b24384397fef1dd153bd3f3"; }; meta = { @@ -51,6 +51,7 @@ rec { tests = [ nixosTests.firefox-esr ]; updateScript = callPackage ./update.nix { attrPath = "firefox-esr-78-unwrapped"; + versionSuffix = "esr"; versionKey = "ffversion"; }; }; diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/update.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/update.nix index e12b552535..bbfd17d1fe 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/update.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/update.nix @@ -6,6 +6,7 @@ , gnused , gnugrep , curl +, gnupg , attrPath , runtimeShell , baseUrl ? "http://archive.mozilla.org/pub/firefox/releases/" @@ -15,7 +16,12 @@ writeScript "update-${attrPath}" '' #!${runtimeShell} - PATH=${lib.makeBinPath [ common-updater-scripts coreutils curl gnugrep gnused xidel ]} + PATH=${lib.makeBinPath [ common-updater-scripts coreutils curl gnugrep gnupg gnused xidel ]} + + set -eux + HOME=`mktemp -d` + export GNUPGHOME=`mktemp -d` + gpg --receive-keys 14F26682D0916CDD81E37B6D61B7B526D98F0353 url=${baseUrl} @@ -31,5 +37,11 @@ writeScript "update-${attrPath}" '' sort --version-sort | \ tail -n 1` - update-source-version ${attrPath} "$version" "" "" --version-key=${versionKey} + curl --silent --show-error -o "$HOME"/shasums "$url$version/SHA512SUMS" + curl --silent --show-error -o "$HOME"/shasums.asc "$url$version/SHA512SUMS.asc" + gpgv --keyring="$GNUPGHOME"/pubring.kbx "$HOME"/shasums.asc "$HOME"/shasums + + hash=$(grep '\.source\.tar\.xz$' "$HOME"/shasums | grep '^[^ ]*' -o) + + update-source-version ${attrPath} "$version" "$hash" "" --version-key=${versionKey} '' diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/wrapper.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/wrapper.nix index 793e8688a5..f2fa787c17 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/wrapper.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/wrapper.nix @@ -2,7 +2,7 @@ , replace, fetchurl, zip, unzip, jq, xdg-utils, writeText ## various stuff that can be plugged in -, ffmpeg, xorg, alsaLib, libpulseaudio, libcanberra-gtk2, libglvnd, libnotify +, ffmpeg, xorg, alsa-lib, libpulseaudio, libcanberra-gtk2, libglvnd, libnotify , gnome/*.gnome-shell*/ , browserpass, chrome-gnome-shell, uget-integrator, plasma5Packages, bukubrow, pipewire , tridactyl-native @@ -11,6 +11,7 @@ , libkrb5 , libva , mesa # firefox wants gbm for drm+dmabuf +, cups }: ## configurability of the wrapper itself @@ -62,15 +63,15 @@ let ++ lib.optional (cfg.enableFXCastBridge or false) fx_cast_bridge ++ extraNativeMessagingHosts ); - libs = lib.optionals stdenv.isLinux [ udev libva mesa libnotify xorg.libXScrnSaver ] + libs = lib.optionals stdenv.isLinux [ udev libva mesa libnotify xorg.libXScrnSaver cups ] ++ lib.optional (pipewireSupport && lib.versionAtLeast version "83") pipewire ++ lib.optional ffmpegSupport ffmpeg ++ lib.optional gssSupport libkrb5 ++ lib.optional useGlvnd libglvnd ++ lib.optionals (cfg.enableQuakeLive or false) - (with xorg; [ stdenv.cc libX11 libXxf86dga libXxf86vm libXext libXt alsaLib zlib ]) + (with xorg; [ stdenv.cc libX11 libXxf86dga libXxf86vm libXext libXt alsa-lib zlib ]) ++ lib.optional (config.pulseaudio or true) libpulseaudio - ++ lib.optional alsaSupport alsaLib + ++ lib.optional alsaSupport alsa-lib ++ pkcs11Modules; gtk_modules = [ libcanberra-gtk2 ]; @@ -303,10 +304,6 @@ let ln -sLt $out/lib/mozilla/pkcs11-modules $ext/lib/mozilla/pkcs11-modules/* done - # For manpages, in case the program supplies them - mkdir -p $out/nix-support - echo ${browser} > $out/nix-support/propagated-user-env-packages - ######################### # # diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/google-chrome/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/google-chrome/default.nix index a7b9ddd07d..ec03a77d26 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/google-chrome/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/google-chrome/default.nix @@ -3,7 +3,7 @@ # Linked dynamic libraries. , glib, fontconfig, freetype, pango, cairo, libX11, libXi, atk, gconf, nss, nspr , libXcursor, libXext, libXfixes, libXrender, libXScrnSaver, libXcomposite, libxcb -, alsaLib, libXdamage, libXtst, libXrandr, libxshmfence, expat, cups +, alsa-lib, libXdamage, libXtst, libXrandr, libxshmfence, expat, cups , dbus, gtk3, gdk-pixbuf, gcc-unwrapped, at-spi2-atk, at-spi2-core , libkrb5, libdrm, mesa , libxkbcommon, wayland # ozone/wayland @@ -59,7 +59,7 @@ let deps = [ glib fontconfig freetype pango cairo libX11 libXi atk gconf nss nspr libXcursor libXext libXfixes libXrender libXScrnSaver libXcomposite libxcb - alsaLib libXdamage libXtst libXrandr libxshmfence expat cups + alsa-lib libXdamage libXtst libXrandr libxshmfence expat cups dbus gdk-pixbuf gcc-unwrapped.lib systemd libexif diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/lagrange/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/lagrange/default.nix index 436bccba47..f15cf6c81b 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/lagrange/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/lagrange/default.nix @@ -15,13 +15,13 @@ stdenv.mkDerivation rec { pname = "lagrange"; - version = "1.5.0"; + version = "1.5.2"; src = fetchFromGitHub { owner = "skyjake"; repo = "lagrange"; rev = "v${version}"; - sha256 = "sha256-W7uSyApTKBTE7bgprgCd8T5dKQ/nLYKIzFxjDMCRmZQ="; + sha256 = "sha256-NjiTjY2YuxUs/Wny7aDqHGw/2ML1fenjHrl089rLXFI="; fetchSubmodules = true; }; diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/opera/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/opera/default.nix index 2028c5a7b2..0bad6c58d0 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/opera/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/opera/default.nix @@ -1,4 +1,4 @@ -{ alsaLib +{ alsa-lib , atk , cairo , cups @@ -65,7 +65,7 @@ in stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib at-spi2-atk at-spi2-core atk diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/palemoon/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/palemoon/default.nix index 63f1958f4a..6afdf61886 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/palemoon/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/palemoon/default.nix @@ -1,11 +1,8 @@ -# Compiler in stdenv MUST be a supported one for official branding -# See https://developer.palemoon.org/build/linux/ -# TODO assert if stdenv.cc is supported? { stdenv , lib , fetchFromGitHub , writeScript -, alsaLib +, alsa-lib , autoconf213 , cairo , desktop-file-utils @@ -37,6 +34,15 @@ , gtk3 }: +# Only specific GCC versions are supported with branding +# https://developer.palemoon.org/build/linux/ +assert stdenv.cc.isGNU; +assert with lib.strings; ( + versionAtLeast stdenv.cc.version "4.9" + && !hasPrefix "6" stdenv.cc.version + && versionOlder stdenv.cc.version "11" +); + let libPath = lib.makeLibraryPath [ ffmpeg @@ -46,14 +52,14 @@ let in stdenv.mkDerivation rec { pname = "palemoon"; - version = "29.2.0"; + version = "29.2.1"; src = fetchFromGitHub { githubBase = "repo.palemoon.org"; owner = "MoonchildProductions"; repo = "Pale-Moon"; rev = "${version}_Release"; - sha256 = "0pa9j41bbfarwi60a6hxi5vpn52mwgr4p05l98acv4fcs1ccb427"; + sha256 = "0djjl79jrnny16p32db5w7pwwv0a24dc8mg1s1bnavhlvmmk52vq"; fetchSubmodules = true; }; @@ -87,7 +93,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib cairo dbus dbus-glib @@ -142,7 +148,6 @@ stdenv.mkDerivation rec { ac_add_options --enable-jemalloc ac_add_options --enable-strip ac_add_options --enable-devtools - # Missing from build instructions, https://forum.palemoon.org/viewtopic.php?f=5&t=25843#p214767 ac_add_options --enable-av1 ac_add_options --disable-eme @@ -188,7 +193,7 @@ stdenv.mkDerivation rec { ./mach install # Fix missing icon due to wrong WMClass - # TODO report upstream + # https://forum.palemoon.org/viewtopic.php?f=3&t=26746&p=214221#p214221 substituteInPlace ./palemoon/branding/official/palemoon.desktop \ --replace 'StartupWMClass="pale moon"' 'StartupWMClass=Pale moon' desktop-file-install --dir=$out/share/applications \ @@ -202,7 +207,7 @@ stdenv.mkDerivation rec { done # Remove unneeded SDK data from installation - # TODO: move to a separate output? + # https://forum.palemoon.org/viewtopic.php?f=37&t=26796&p=214676#p214729 rm -rf $out/{include,share/idl,lib/palemoon-devel-${version}} runHook postInstall @@ -231,6 +236,7 @@ stdenv.mkDerivation rec { extensions and themes to make the browser truly your own. ''; homepage = "https://www.palemoon.org/"; + changelog = "https://repo.palemoon.org/MoonchildProductions/Pale-Moon/releases/tag/${version}_Release"; license = licenses.mpl20; maintainers = with maintainers; [ AndersonTorres OPNA2608 ]; platforms = [ "i686-linux" "x86_64-linux" ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix index 72b17400df..d1830f1c52 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix @@ -88,19 +88,19 @@ let fteLibPath = makeLibraryPath [ stdenv.cc.cc gmp ]; # Upstream source - version = "10.0.16"; + version = "10.0.18"; lang = "en-US"; srcs = { x86_64-linux = fetchurl { url = "https://dist.torproject.org/torbrowser/${version}/tor-browser-linux64-${version}_${lang}.tar.xz"; - sha256 = "07h2gd6cwwq17lrwjpfah1xvr8ny8700qvi971qacrr7ssicw2pw"; + sha256 = "15ni33mkg3awfmk3ynr0vi4max1h2k0s10xw3dpmdx6chzv4ll14"; }; i686-linux = fetchurl { url = "https://dist.torproject.org/torbrowser/${version}/tor-browser-linux32-${version}_${lang}.tar.xz"; - sha256 = "145kniiby5nnd0ll3v2gggzxz52bqbrdp72hvh96i8qnzi0fq25a"; + sha256 = "16lx8wkxli1fzq5f6gcw3im4p8k3xdmnmf6w0p7n8hd8681b1w5s"; }; }; in @@ -401,7 +401,7 @@ stdenv.mkDerivation rec { homepage = "https://www.torproject.org/"; changelog = "https://gitweb.torproject.org/builders/tor-browser-build.git/plain/projects/tor-browser/Bundle-Data/Docs/ChangeLog.txt?h=maint-${version}"; platforms = attrNames srcs; - maintainers = with maintainers; [ offline matejc thoughtpolice joachifm hax404 cap KarlJoad ]; + maintainers = with maintainers; [ offline matejc thoughtpolice joachifm hax404 KarlJoad ]; mainProgram = "tor-browser"; hydraPlatforms = []; # MPL2.0+, GPL+, &c. While it's not entirely clear whether diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/tor-browser-bundle/extensions.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/tor-browser-bundle/extensions.nix deleted file mode 100644 index 7356768f39..0000000000 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/tor-browser-bundle/extensions.nix +++ /dev/null @@ -1,111 +0,0 @@ -{ stdenv -, fetchgit -, fetchurl - -# common -, zip - -# HTTPS Everywhere -, git -, libxml2 # xmllint -, python27 -, python27Packages -, rsync -}: - -{ - https-everywhere = stdenv.mkDerivation rec { - pname = "https-everywhere"; - version = "2017.10.4"; - - extid = "https-everywhere-eff@eff.org"; - - src = fetchgit { - url = "https://git.torproject.org/https-everywhere.git"; - rev = "refs/tags/${version}"; - sha256 = "1g7971xygnhagnb25xjdf6mli6091ai9igx42d0ww88g8i0cqfzj"; - fetchSubmodules = true; # for translations, TODO: remove - }; - - nativeBuildInputs = [ - git - libxml2 # xmllint - python27 - python27Packages.lxml - rsync - zip - ]; - - buildPhase = '' - $shell ./makexpi.sh ${version} --no-recurse - ''; - - installPhase = '' - install -m 444 -D pkg/https-everywhere-$version-eff.xpi "$out/$extid.xpi" - ''; - }; - - noscript = stdenv.mkDerivation rec { - pname = "noscript"; - version = "5.1.2"; - - extid = "{73a6fe31-595d-460b-a920-fcc0f8843232}"; - - src = fetchurl { - url = "https://secure.informaction.com/download/releases/noscript-${version}.xpi"; - sha256 = "1fzspdiwhjabwz1yxb3gzj7giz9jbc1xxm65i93rvhzcp537cs42"; - }; - - dontUnpack = true; - - installPhase = '' - install -m 444 -D $src "$out/$extid.xpi" - ''; - }; - - torbutton = stdenv.mkDerivation rec { - pname = "torbutton"; - version = "1.9.8.1"; - - extid = "torbutton@torproject.org"; - - src = fetchgit { - url = "https://git.torproject.org/torbutton.git"; - rev = "refs/tags/${version}"; - sha256 = "1amp0c9ky0a7fsa0bcbi6n6ginw7s2g3an4rj7kvc1lxmrcsm65l"; - }; - - nativeBuildInputs = [ zip ]; - - buildPhase = '' - $shell ./makexpi.sh - ''; - - installPhase = '' - install -m 444 -D pkg/torbutton-$version.xpi "$out/$extid.xpi" - ''; - }; - - tor-launcher = stdenv.mkDerivation rec { - pname = "tor-launcher"; - version = "0.2.13"; - - extid = "tor-launcher@torproject.org"; - - src = fetchgit { - url = "https://git.torproject.org/tor-launcher.git"; - rev = "refs/tags/${version}"; - sha256 = "1f98v88y2clwvjiw77kxqc9cacp5h0489a540nc2wmsx7vnskrq0"; - }; - - nativeBuildInputs = [ zip ]; - - buildPhase = '' - make package - ''; - - installPhase = '' - install -m 444 -D pkg/tor-launcher-$version.xpi "$out/$extid.xpi" - ''; - }; -} diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/default.nix index 248bf86c0c..0eeb523115 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/default.nix @@ -2,13 +2,13 @@ mkYarnPackage rec { pname = "vieb"; - version = "5.0.0"; + version = "5.2.0"; src = fetchFromGitHub { - owner = "jelmerro"; + owner = "Jelmerro"; repo = pname; rev = version; - sha256 = "sha256-0fbH2tmrgbu/XQg1piK9f56cow+R/Qe6bYMdbeV/mus="; + sha256 = "sha256-wLaOqjDxgjfv4+TJeLE0dkrhfdnNSjiDqtFcHTm8uG4="; }; packageJSON = ./package.json; @@ -50,6 +50,7 @@ mkYarnPackage rec { meta = with lib; { homepage = "https://vieb.dev/"; + changelog = "https://github.com/Jelmerro/Vieb/releases/tag/${version}"; description = "Vim Inspired Electron Browser"; maintainers = with maintainers; [ gebner fortuneteller2k ]; platforms = platforms.unix; diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/package.json b/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/package.json index 789c507786..e12d86356c 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/package.json +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/package.json @@ -1,9 +1,8 @@ { "name": "vieb", "productName": "Vieb", - "version": "5.0.0", + "version": "5.2.0", "description": "Vim Inspired Electron Browser", - "bin": "app.js", "main": "app/index.js", "scripts": { "build": "node build.js", @@ -30,18 +29,18 @@ "license": "GPL-3.0-or-later", "devDependencies": { "archiver": "5.3.0", - "electron": "13.0.1", - "electron-builder": "22.10.5", - "eslint": "7.27.0", - "eslint-plugin-compat": "^3.9.0", + "electron": "13.1.2", + "electron-builder": "22.11.7", + "eslint": "7.29.0", + "eslint-plugin-compat": "3.9.0", "eslint-plugin-sort-keys-fix": "1.1.1", - "jest-environment-jsdom": "^27.0.1", - "jest": "27.0.1" + "jest-environment-jsdom": "27.0.3", + "jest": "27.0.4" }, "dependencies": { "7zip-bin": "5.1.1", - "@cliqz/adblocker-electron": "1.20.6", - "@cliqz/adblocker-electron-preload": "1.20.6", + "@cliqz/adblocker-electron": "1.22.1", + "@cliqz/adblocker-electron-preload": "1.22.1", "is-svg": "4.3.1", "rimraf": "3.0.2" }, diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/yarn.lock b/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/yarn.lock index 2c484e5bcf..af42526610 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/yarn.lock +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/yarn.lock @@ -2,16 +2,11 @@ # yarn lockfile v1 -"7zip-bin@5.1.1": +"7zip-bin@5.1.1", "7zip-bin@~5.1.1": version "5.1.1" resolved "https://registry.yarnpkg.com/7zip-bin/-/7zip-bin-5.1.1.tgz#9274ec7460652f9c632c59addf24efb1684ef876" integrity sha512-sAP4LldeWNz0lNzmTird3uWfFDWWTeg6V/MsmyyLR9X1idwKBWIgt/ZvinqQldJm3LecKEs1emkbquO6PCiLVQ== -"7zip-bin@~5.0.3": - version "5.0.3" - resolved "https://registry.yarnpkg.com/7zip-bin/-/7zip-bin-5.0.3.tgz#bc5b5532ecafd923a61f2fb097e3b108c0106a3f" - integrity sha512-GLyWIFBbGvpKPGo55JyRZAo4lVbnBiD52cKlw/0Vt+wnmKvWJkpZvsjVoaIolyBXDeAQKSicRtqFNPem9w0WYA== - "@babel/code-frame@7.12.11": version "7.12.11" resolved "https://registry.yarnpkg.com/@babel/code-frame/-/code-frame-7.12.11.tgz#f4ad435aa263db935b8f10f2c552d23fb716a63f" @@ -19,32 +14,32 @@ dependencies: "@babel/highlight" "^7.10.4" -"@babel/code-frame@^7.12.13": - version "7.12.13" - resolved "https://registry.yarnpkg.com/@babel/code-frame/-/code-frame-7.12.13.tgz#dcfc826beef65e75c50e21d3837d7d95798dd658" - integrity sha512-HV1Cm0Q3ZrpCR93tkWOYiuYIgLxZXZFVG2VgK+MBWjUqZTundupbfx2aXarXuw5Ko5aMcjtJgbSs4vUGBS5v6g== +"@babel/code-frame@^7.12.13", "@babel/code-frame@^7.14.5": + version "7.14.5" + resolved "https://registry.yarnpkg.com/@babel/code-frame/-/code-frame-7.14.5.tgz#23b08d740e83f49c5e59945fbf1b43e80bbf4edb" + integrity sha512-9pzDqyc6OLDaqe+zbACgFkb6fKMNG6CObKpnYXChRsvYGyEdc7CA2BaqeOM+vOtCS5ndmJicPJhKAwYRI6UfFw== dependencies: - 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"@babel/code-frame" "^7.12.13" - "@babel/generator" "^7.14.3" - "@babel/helper-compilation-targets" "^7.13.16" - "@babel/helper-module-transforms" "^7.14.2" - "@babel/helpers" "^7.14.0" - "@babel/parser" "^7.14.3" - "@babel/template" "^7.12.13" - "@babel/traverse" "^7.14.2" - "@babel/types" "^7.14.2" + "@babel/code-frame" "^7.14.5" + "@babel/generator" "^7.14.5" + "@babel/helper-compilation-targets" "^7.14.5" + "@babel/helper-module-transforms" "^7.14.5" + "@babel/helpers" "^7.14.6" + "@babel/parser" "^7.14.6" + "@babel/template" "^7.14.5" + "@babel/traverse" "^7.14.5" + "@babel/types" "^7.14.5" convert-source-map "^1.7.0" debug "^4.1.0" gensync "^1.0.0-beta.2" @@ -52,137 +47,144 @@ semver "^6.3.0" source-map "^0.5.0" -"@babel/generator@^7.14.2", "@babel/generator@^7.14.3", "@babel/generator@^7.7.2": - version "7.14.3" - resolved "https://registry.yarnpkg.com/@babel/generator/-/generator-7.14.3.tgz#0c2652d91f7bddab7cccc6ba8157e4f40dcedb91" - integrity sha512-bn0S6flG/j0xtQdz3hsjJ624h3W0r3llttBMfyHX3YrZ/KtLYr15bjA0FXkgW7FpvrDuTuElXeVjiKlYRpnOFA== +"@babel/generator@^7.14.5", "@babel/generator@^7.7.2": + version "7.14.5" + resolved "https://registry.yarnpkg.com/@babel/generator/-/generator-7.14.5.tgz#848d7b9f031caca9d0cd0af01b063f226f52d785" + integrity sha512-y3rlP+/G25OIX3mYKKIOlQRcqj7YgrvHxOLbVmyLJ9bPmi5ttvUmpydVjcFjZphOktWuA7ovbx91ECloWTfjIA== dependencies: - 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dependencies: - "@types/yargs-parser" "*" - -"@types/yargs@^16.0.0": +"@types/yargs@^16.0.0", "@types/yargs@^16.0.2": version "16.0.3" resolved "https://registry.yarnpkg.com/@types/yargs/-/yargs-16.0.3.tgz#4b6d35bb8e680510a7dc2308518a80ee1ef27e01" integrity sha512-YlFfTGS+zqCgXuXNV26rOIeETOkXnGQXP/pjjL9P0gO/EP9jTmc7pUBhx+jVEIxpq41RX33GQ7N3DzOSfZoglQ== @@ -864,9 +876,9 @@ acorn@^7.1.1, acorn@^7.4.0: integrity sha512-nQyp0o1/mNdbTO1PO6kHkwSrmgZ0MT/jCCpNiwbUjGoRN4dlBhqJtoQuCnEOKzgTVwg0ZWiCoQy6SxMebQVh8A== acorn@^8.2.4: - version "8.2.4" - resolved "https://registry.yarnpkg.com/acorn/-/acorn-8.2.4.tgz#caba24b08185c3b56e3168e97d15ed17f4d31fd0" - integrity sha512-Ibt84YwBDDA890eDiDCEqcbwvHlBvzzDkU2cGBBDDI1QWT12jTiXIOn2CIw5KK4i6N5Z2HUxwYjzriDyqaqqZg== + version "8.4.0" + resolved "https://registry.yarnpkg.com/acorn/-/acorn-8.4.0.tgz#af53266e698d7cffa416714b503066a82221be60" + integrity sha512-ULr0LDaEqQrMFGyQ3bhJkLsbtrQ8QibAseGZeaSUiT/6zb9IvIkomWHJIvgvwad+hinRAgsI51JcWk2yvwyL+w== agent-base@6: version "6.0.2" @@ -891,9 +903,9 @@ ajv@^6.10.0, ajv@^6.12.0, ajv@^6.12.4: uri-js "^4.2.2" ajv@^8.0.1: - 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crc32-stream "^4.0.1" + crc32-stream "^4.0.2" normalize-path "^3.0.0" readable-stream "^3.6.0" @@ -1486,9 +1501,9 @@ concat-stream@^1.6.2: typedarray "^0.0.6" config-chain@^1.1.11: - version "1.1.12" - resolved "https://registry.yarnpkg.com/config-chain/-/config-chain-1.1.12.tgz#0fde8d091200eb5e808caf25fe618c02f48e4efa" - integrity sha512-a1eOIcu8+7lUInge4Rpf/n4Krkf3Dd9lqhljRzII1/Zno/kRtUWnznPO3jOKBmTEktkt3fkxisUcivoj0ebzoA== + version "1.1.13" + resolved "https://registry.yarnpkg.com/config-chain/-/config-chain-1.1.13.tgz#fad0795aa6a6cdaff9ed1b68e9dff94372c232f4" + integrity sha512-qj+f8APARXHrM0hraqXYb2/bOVSV4PvJQlNZ/DVj0QrmNM2q2euizkeuVckQ57J+W0mRH6Hvi+k50M4Jul2VRQ== dependencies: ini "^1.3.4" proto-list "~1.2.1" @@ -1506,16 +1521,16 @@ configstore@^5.0.1: xdg-basedir "^4.0.0" convert-source-map@^1.4.0, convert-source-map@^1.6.0, convert-source-map@^1.7.0: - version "1.7.0" - resolved "https://registry.yarnpkg.com/convert-source-map/-/convert-source-map-1.7.0.tgz#17a2cb882d7f77d3490585e2ce6c524424a3a442" - integrity sha512-4FJkXzKXEDB1snCFZlLP4gpC3JILicCpGbzG9f9G7tGqGCzETQ2hWPrcinA9oU4wtf2biUaEH5065UnMeR33oA== + version "1.8.0" + resolved "https://registry.yarnpkg.com/convert-source-map/-/convert-source-map-1.8.0.tgz#f3373c32d21b4d780dd8004514684fb791ca4369" + integrity sha512-+OQdjP49zViI/6i7nIJpA8rAl4sV/JdPfU9nZs3VqOwGIgizICvuN2ru6fMd+4llL0tar18UYJXfZ/TWtmhUjA== dependencies: safe-buffer "~5.1.1" core-js@^3.6.5: - version "3.13.0" - resolved "https://registry.yarnpkg.com/core-js/-/core-js-3.13.0.tgz#58ca436bf01d6903aee3d364089868d0d89fe58d" - integrity sha512-iWDbiyha1M5vFwPFmQnvRv+tJzGbFAm6XimJUT0NgHYW3xZEs1SkCAcasWSVFxpI2Xb/V1DDJckq3v90+bQnog== + version "3.15.0" + resolved "https://registry.yarnpkg.com/core-js/-/core-js-3.15.0.tgz#db9554ebce0b6fd90dc9b1f2465c841d2d055044" + integrity sha512-GUbtPllXMYRzIgHNZ4dTYTcUemls2cni83Q4Q/TrFONHfhcg9oEGOtaGHfb0cpzec60P96UKPvMkjX1jET8rUw== core-util-is@1.0.2, core-util-is@~1.0.0: version "1.0.2" @@ -1530,7 +1545,7 @@ crc-32@^1.2.0: exit-on-epipe "~1.0.1" printj "~1.1.0" -crc32-stream@^4.0.1: +crc32-stream@^4.0.2: version "4.0.2" resolved "https://registry.yarnpkg.com/crc32-stream/-/crc32-stream-4.0.2.tgz#c922ad22b38395abe9d3870f02fa8134ed709007" integrity sha512-DxFZ/Hk473b/muq1VJ///PMNLj0ZMnzye9thBpmjpJKCc5eMgB95aK8zCGrGfQ90cWo561Te6HK9D+j4KPdM6w== @@ -1680,21 +1695,21 @@ dir-compare@^2.4.0: commander "2.9.0" minimatch "3.0.4" -dmg-builder@22.10.5: - version "22.10.5" - resolved "https://registry.yarnpkg.com/dmg-builder/-/dmg-builder-22.10.5.tgz#65a33c106ead5a350c7de8997c546559bd6e0e7c" - integrity sha512-58FEpfH8PEFqjbUNka4bYr52snRT8+LSXrP4gy6EZWOVICbOlmTOYj988pfoLam5C5iXb3odmyUQqwWOxlsEUw== +dmg-builder@22.11.7: + version "22.11.7" + resolved "https://registry.yarnpkg.com/dmg-builder/-/dmg-builder-22.11.7.tgz#5956008c18d40ee72c0ea01ffea9590dbf51df89" + integrity sha512-+I+XfP2DODHB6PwFANgpH/WMzzCA5r5XoMvbFCIYjQjJpXlO0XnqQaamzFl2vh/Wz/Qt0d0lJMgRy8gKR3MGdQ== dependencies: - app-builder-lib "22.10.5" - builder-util "22.10.5" - fs-extra "^9.1.0" + app-builder-lib "22.11.7" + builder-util "22.11.7" + builder-util-runtime "8.7.6" + fs-extra "^10.0.0" iconv-lite "^0.6.2" - js-yaml "^4.0.0" - sanitize-filename "^1.6.3" + js-yaml "^4.1.0" optionalDependencies: - dmg-license "^1.0.8" + dmg-license "^1.0.9" -dmg-license@^1.0.8: +dmg-license@^1.0.9: version "1.0.9" resolved "https://registry.yarnpkg.com/dmg-license/-/dmg-license-1.0.9.tgz#a2fb8d692af0e30b0730b5afc91ed9edc2d9cb4f" integrity sha512-Rq6qMDaDou2+aPN2SYy0x7LDznoJ/XaG6oDcH5wXUp+WRWQMUYE6eM+F+nex+/LSXOp1uw4HLFoed0YbfU8R/Q== @@ -1735,24 +1750,16 @@ dotenv-expand@^5.1.0: resolved "https://registry.yarnpkg.com/dotenv-expand/-/dotenv-expand-5.1.0.tgz#3fbaf020bfd794884072ea26b1e9791d45a629f0" integrity sha512-YXQl1DSa4/PQyRfgrv6aoNjhasp/p4qs9FjJ4q4cQk+8m4r6k4ZSiEyytKG8f8W9gi8WsQtIObNmKd+tMzNTmA== -dotenv@^8.2.0: - 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"@jest/core" "^27.0.1" + "@jest/core" "^27.0.4" import-local "^3.0.2" - jest-cli "^27.0.1" + jest-cli "^27.0.4" js-tokens@^4.0.0: version "4.0.0" @@ -3107,7 +3091,7 @@ js-yaml@^3.13.1: argparse "^1.0.7" esprima "^4.0.0" -js-yaml@^4.0.0: +js-yaml@^4.1.0: version "4.1.0" resolved "https://registry.yarnpkg.com/js-yaml/-/js-yaml-4.1.0.tgz#c1fb65f8f5017901cdd2c951864ba18458a10602" integrity sha512-wpxZs9NoxZaJESJGIZTyDEaYpl0FKSA+FB9aJiyemKhMwkxQg63h4T1KJgUGHpTqPDNRcmmYLugrRjJlBtWvRA== @@ -3177,7 +3161,7 @@ json-stringify-safe@^5.0.1: resolved "https://registry.yarnpkg.com/json-stringify-safe/-/json-stringify-safe-5.0.1.tgz#1296a2d58fd45f19a0f6ce01d65701e2c735b6eb" integrity sha1-Epai1Y/UXxmg9s4B1lcB4sc1tus= -json5@^2.1.2: +json5@^2.1.2, json5@^2.2.0: version "2.2.0" resolved "https://registry.yarnpkg.com/json5/-/json5-2.2.0.tgz#2dfefe720c6ba525d9ebd909950f0515316c89a3" integrity sha512-f+8cldu7X/y7RAJurMEJmdoKXGB/X550w2Nr3tTbezL6RwEE/iMcm+tZnXeoZtKuOq6ft8+CqzEkrIgx1fPoQA== @@ -3219,7 +3203,7 @@ latest-version@^5.1.0: dependencies: package-json "^6.3.0" -lazy-val@^1.0.4: +lazy-val@^1.0.4, lazy-val@^1.0.5: version "1.0.5" resolved "https://registry.yarnpkg.com/lazy-val/-/lazy-val-1.0.5.tgz#6cf3b9f5bc31cee7ee3e369c0832b7583dcd923d" integrity sha512-0/BnGCCfyUMkBpeDgWihanIAF9JmZhHBgUhEqzvf+adhNGLoP6TaiI5oF8oyb3I45P+PcnrqihSf01M0l0G5+Q== @@ -3304,7 +3288,7 @@ lodash.union@^4.6.0: resolved "https://registry.yarnpkg.com/lodash.union/-/lodash.union-4.6.0.tgz#48bb5088409f16f1821666641c44dd1aaae3cd88" integrity sha1-SLtQiECfFvGCFmZkHETdGqrjzYg= -lodash@^4.17.10, lodash@^4.7.0: +lodash@^4.17.10, lodash@^4.17.15, lodash@^4.7.0: version "4.17.21" resolved "https://registry.yarnpkg.com/lodash/-/lodash-4.17.21.tgz#679591c564c3bffaae8454cf0b3df370c3d6911c" integrity sha512-v2kDEe57lecTulaDIuNTPy3Ry4gLGJ6Z1O3vE1krgXZNrsQ+LFTGHVxVjcXPs17LhbZVGedAJv8XZ1tvj5FvSg== @@ -3360,19 +3344,19 @@ micromatch@^4.0.4: braces "^3.0.1" picomatch "^2.2.3" -mime-db@1.47.0: - version "1.47.0" - resolved "https://registry.yarnpkg.com/mime-db/-/mime-db-1.47.0.tgz#8cb313e59965d3c05cfbf898915a267af46a335c" - integrity sha512-QBmA/G2y+IfeS4oktet3qRZ+P5kPhCKRXxXnQEudYqUaEioAU1/Lq2us3D/t1Jfo4hE9REQPrbB7K5sOczJVIw== +mime-db@1.48.0: + version "1.48.0" + resolved "https://registry.yarnpkg.com/mime-db/-/mime-db-1.48.0.tgz#e35b31045dd7eada3aaad537ed88a33afbef2d1d" + integrity sha512-FM3QwxV+TnZYQ2aRqhlKBMHxk10lTbMt3bBkMAp54ddrNeVSfcQYOOKuGuy3Ddrm38I04If834fOUSq1yzslJQ== mime-types@^2.1.12: - version "2.1.30" - resolved "https://registry.yarnpkg.com/mime-types/-/mime-types-2.1.30.tgz#6e7be8b4c479825f85ed6326695db73f9305d62d" - integrity sha512-crmjA4bLtR8m9qLpHvgxSChT+XoSlZi8J4n/aIdn3z92e/U47Z0V/yl+Wh9W046GgFVAmoNR/fmdbZYcSSIUeg== + version "2.1.31" + resolved "https://registry.yarnpkg.com/mime-types/-/mime-types-2.1.31.tgz#a00d76b74317c61f9c2db2218b8e9f8e9c5c9e6b" + integrity sha512-XGZnNzm3QvgKxa8dpzyhFTHmpP3l5YNusmne07VUOXxou9CqUqYa/HBy124RqtVh/O2pECas/MOcsDgpilPOPg== dependencies: - mime-db "1.47.0" + mime-db "1.48.0" -mime@^2.5.0: +mime@^2.5.2: version "2.5.2" resolved "https://registry.yarnpkg.com/mime/-/mime-2.5.2.tgz#6e3dc6cc2b9510643830e5f19d5cb753da5eeabe" integrity sha512-tqkh47FzKeCPD2PUiPB6pkbMzsCasjxAfC62/Wap5qrUWcb+sFasXUC5I3gYM5iBM8v/Qpn4UK0x+j0iHyFPDg== @@ -3437,19 +3421,9 @@ node-modules-regexp@^1.0.0: integrity sha1-jZ2+KJZKSsVxLpExZCEHxx6Q7EA= node-releases@^1.1.71: - version "1.1.72" - resolved "https://registry.yarnpkg.com/node-releases/-/node-releases-1.1.72.tgz#14802ab6b1039a79a0c7d662b610a5bbd76eacbe" - integrity sha512-LLUo+PpH3dU6XizX3iVoubUNheF/owjXCZZ5yACDxNnPtgFuludV1ZL3ayK1kVep42Rmm0+R9/Y60NQbZ2bifw== - -normalize-package-data@^3.0.0: - version "3.0.2" - resolved "https://registry.yarnpkg.com/normalize-package-data/-/normalize-package-data-3.0.2.tgz#cae5c410ae2434f9a6c1baa65d5bc3b9366c8699" - integrity sha512-6CdZocmfGaKnIHPVFhJJZ3GuR8SsLKvDANFp47Jmy51aKIr8akjAWTSxtpI+MBgBFdSMRyo4hMpDlT6dTffgZg== - dependencies: - hosted-git-info "^4.0.1" - resolve "^1.20.0" - semver "^7.3.4" - validate-npm-package-license "^3.0.1" + version "1.1.73" + resolved "https://registry.yarnpkg.com/node-releases/-/node-releases-1.1.73.tgz#dd4e81ddd5277ff846b80b52bb40c49edf7a7b20" + integrity sha512-uW7fodD6pyW2FZNZnp/Z3hvWKeEW1Y8R1+1CnErE8cXFXzl5blBOoVB41CvMer6P6Q0S5FXDwcHgFd1Wj0U9zg== normalize-path@^3.0.0: version "3.0.0" @@ -3648,12 +3622,12 @@ prepend-http@^2.0.0: resolved "https://registry.yarnpkg.com/prepend-http/-/prepend-http-2.0.0.tgz#e92434bfa5ea8c19f41cdfd401d741a3c819d897" integrity sha1-6SQ0v6XqjBn0HN/UAddBo8gZ2Jc= -pretty-format@^27.0.1: - version "27.0.1" - resolved "https://registry.yarnpkg.com/pretty-format/-/pretty-format-27.0.1.tgz#c4094621dfbd3e8ab751964d1cf01edc6f88474d" - integrity sha512-qE+0J6c/gd+R6XTcQgPJMc5hMJNsxzSF5p8iZSbMZ7GQzYGlSLNkh2P80Wa2dbF4gEVUsJEgcrBY+1L2/j265w== +pretty-format@^27.0.2: + version "27.0.2" + resolved "https://registry.yarnpkg.com/pretty-format/-/pretty-format-27.0.2.tgz#9283ff8c4f581b186b2d4da461617143dca478a4" + integrity sha512-mXKbbBPnYTG7Yra9qFBtqj+IXcsvxsvOBco3QHxtxTl+hHKq6QdzMZ+q0CtL4ORHZgwGImRr2XZUX2EWzORxig== dependencies: - "@jest/types" "^27.0.1" + "@jest/types" "^27.0.2" ansi-regex "^5.0.0" ansi-styles "^5.0.0" react-is "^17.0.1" @@ -3726,15 +3700,15 @@ react-is@^17.0.1: resolved "https://registry.yarnpkg.com/react-is/-/react-is-17.0.2.tgz#e691d4a8e9c789365655539ab372762b0efb54f0" integrity sha512-w2GsyukL62IJnlaff/nRegPQR94C/XXamvMWmSHRJ4y7Ts/4ocGRmTHvOs8PSE6pB3dWOrD/nueuU5sduBsQ4w== -read-config-file@6.0.0: - version "6.0.0" - resolved "https://registry.yarnpkg.com/read-config-file/-/read-config-file-6.0.0.tgz#224b5dca6a5bdc1fb19e63f89f342680efdb9299" - integrity sha512-PHjROSdpceKUmqS06wqwP92VrM46PZSTubmNIMJ5DrMwg1OgenSTSEHIkCa6TiOJ+y/J0xnG1fFwG3M+Oi1aNA== +read-config-file@6.2.0: + version "6.2.0" + resolved "https://registry.yarnpkg.com/read-config-file/-/read-config-file-6.2.0.tgz#71536072330bcd62ba814f91458b12add9fc7ade" + integrity sha512-gx7Pgr5I56JtYz+WuqEbQHj/xWo+5Vwua2jhb1VwM4Wid5PqYmZ4i00ZB0YEGIfkVBsCv9UrjgyqCiQfS/Oosg== dependencies: - dotenv "^8.2.0" + dotenv "^9.0.2" dotenv-expand "^5.1.0" - 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version "3.0.9" - resolved "https://registry.yarnpkg.com/spdx-license-ids/-/spdx-license-ids-3.0.9.tgz#8a595135def9592bda69709474f1cbeea7c2467f" - integrity sha512-Ki212dKK4ogX+xDo4CtOZBVIwhsKBEfsEEcwmJfLQzirgc2jIWdzg40Unxz/HzEUqM1WFzVlQSMF9kZZ2HboLQ== - sprintf-js@^1.1.2: version "1.1.2" resolved "https://registry.yarnpkg.com/sprintf-js/-/sprintf-js-1.1.2.tgz#da1765262bf8c0f571749f2ad6c26300207ae673" @@ -4193,7 +4141,7 @@ tar-stream@^2.2.0: inherits "^2.0.3" readable-stream "^3.1.1" -temp-file@^3.3.7: +temp-file@^3.4.0: version "3.4.0" resolved "https://registry.yarnpkg.com/temp-file/-/temp-file-3.4.0.tgz#766ea28911c683996c248ef1a20eea04d51652c7" integrity sha512-C5tjlC/HCtVUOi3KWVokd4vHVViOmGjtLwIh4MuzPo/nMYTV/p1urt3RnMz2IWXDdKEGJH3k5+KPxtqRsUYGtg== @@ -4223,27 +4171,36 @@ text-table@^0.2.0: resolved "https://registry.yarnpkg.com/text-table/-/text-table-0.2.0.tgz#7f5ee823ae805207c00af2df4a84ec3fcfa570b4" integrity sha1-f17oI66AUgfACvLfSoTsP8+lcLQ= -textextensions@^5.11.0: - version "5.12.0" - 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version "0.8.1" - resolved "https://registry.yarnpkg.com/type-fest/-/type-fest-0.8.1.tgz#09e249ebde851d3b1e48d27c105444667f17b83d" - integrity sha512-4dbzIzqvjtgiM5rw1k5rEHtBANKmdudhGyBEajN01fEyhaAIhsoKNy6y7+IN93IfpFtwY9iqi7kD+xwKhQsNJA== - typedarray-to-buffer@^3.1.5: version "3.1.5" resolved "https://registry.yarnpkg.com/typedarray-to-buffer/-/typedarray-to-buffer-3.1.5.tgz#a97ee7a9ff42691b9f783ff1bc5112fe3fca9080" @@ -4421,14 +4373,6 @@ v8-to-istanbul@^7.0.0: convert-source-map "^1.6.0" source-map "^0.7.3" -validate-npm-package-license@^3.0.1: - version "3.0.4" - resolved "https://registry.yarnpkg.com/validate-npm-package-license/-/validate-npm-package-license-3.0.4.tgz#fc91f6b9c7ba15c857f4cb2c5defeec39d4f410a" - integrity sha512-DpKm2Ui/xN7/HQKCtpZxoRWBhZ9Z0kqtygG8XCgNQ8ZlDnxuQmWhj566j8fN4Cu3/JmbhsDo7fcAJq4s9h27Ew== - dependencies: - spdx-correct "^3.0.0" - spdx-expression-parse "^3.0.0" - verror@^1.10.0: version "1.10.0" resolved "https://registry.yarnpkg.com/verror/-/verror-1.10.0.tgz#3a105ca17053af55d6e270c1f8288682e18da400" @@ -4438,18 +4382,6 @@ verror@^1.10.0: core-util-is "1.0.2" extsprintf "^1.2.0" -version-compare@^1.0.0: - version "1.1.0" - resolved "https://registry.yarnpkg.com/version-compare/-/version-compare-1.1.0.tgz#7b3e67e7e6cec5c72d9c9e586f8854e419ade17c" - integrity sha512-zVKtPOJTC9x23lzS4+4D7J+drq80BXVYAmObnr5zqxxFVH7OffJ1lJlAS7LYsQNV56jx/wtbw0UV7XHLrvd6kQ== - -version-range@^1.0.0: - version "1.1.0" - resolved "https://registry.yarnpkg.com/version-range/-/version-range-1.1.0.tgz#1c233064202ee742afc9d56e21da3b2e15260acf" - integrity sha512-R1Ggfg2EXamrnrV3TkZ6yBNgITDbclB3viwSjbZ3+eK0VVNK4ajkYJTnDz5N0bIMYDtK9MUBvXJUnKO5RWWJ6w== - dependencies: - version-compare "^1.0.0" - w3c-hr-time@^1.0.2: version "1.0.2" resolved "https://registry.yarnpkg.com/w3c-hr-time/-/w3c-hr-time-1.0.2.tgz#0a89cdf5cc15822df9c360543676963e0cc308cd" @@ -4494,12 +4426,12 @@ whatwg-mimetype@^2.3.0: integrity sha512-M4yMwr6mAnQz76TbJm914+gPpB/nCwvZbJU28cUD6dR004SAxDLOOSUaB1JDRqLtaOV/vi0IC5lEAGFgrjGv/g== whatwg-url@^8.0.0, whatwg-url@^8.5.0: - version "8.5.0" - resolved "https://registry.yarnpkg.com/whatwg-url/-/whatwg-url-8.5.0.tgz#7752b8464fc0903fec89aa9846fc9efe07351fd3" - integrity sha512-fy+R77xWv0AiqfLl4nuGUlQ3/6b5uNfQ4WAbGQVMYshCTCCPK9psC1nWh3XHuxGVCtlcDDQPQW1csmmIQo+fwg== + version "8.6.0" + resolved "https://registry.yarnpkg.com/whatwg-url/-/whatwg-url-8.6.0.tgz#27c0205a4902084b872aecb97cf0f2a7a3011f4c" + integrity sha512-os0KkeeqUOl7ccdDT1qqUcS4KH4tcBTSKK5Nl5WKb2lyxInIZ/CpjkqKa1Ss12mjfdcRX9mHmPPs7/SxG1Hbdw== dependencies: lodash "^4.7.0" - tr46 "^2.0.2" + tr46 "^2.1.0" webidl-conversions "^6.1.0" which@^2.0.1: @@ -4546,9 +4478,9 @@ write-file-atomic@^3.0.0: typedarray-to-buffer "^3.1.5" ws@^7.4.5: - version "7.4.6" - resolved "https://registry.yarnpkg.com/ws/-/ws-7.4.6.tgz#5654ca8ecdeee47c33a9a4bf6d28e2be2980377c" - integrity sha512-YmhHDO4MzaDLB+M9ym/mDA5z0naX8j7SIlT8f8z+I0VtzsRbekxEutHSme7NPS2qE8StCYQNUnfWdXta/Yu85A== + version "7.5.0" + resolved "https://registry.yarnpkg.com/ws/-/ws-7.5.0.tgz#0033bafea031fb9df041b2026fc72a571ca44691" + integrity sha512-6ezXvzOZupqKj4jUqbQ9tXuJNo+BR2gU8fFRk3XCP3e0G6WT414u5ELe6Y0vtp7kmSJ3F7YWObSNr1ESsgi4vw== xdg-basedir@^4.0.0: version "4.0.0" @@ -4591,11 +4523,11 @@ yallist@^4.0.0: integrity sha512-3wdGidZyq5PB084XLES5TpOSRA3wjXAlIWMhum2kRcv/41Sn2emQ0dycQW4uZXLejwKvg6EsvbdlVL+FYEct7A== yargs-parser@^20.2.2: - version "20.2.7" - resolved "https://registry.yarnpkg.com/yargs-parser/-/yargs-parser-20.2.7.tgz#61df85c113edfb5a7a4e36eb8aa60ef423cbc90a" - integrity sha512-FiNkvbeHzB/syOjIUxFDCnhSfzAL8R5vs40MgLFBorXACCOAEaWu0gRZl14vG8MR9AOJIZbmkjhusqBYZ3HTHw== + version "20.2.9" + resolved "https://registry.yarnpkg.com/yargs-parser/-/yargs-parser-20.2.9.tgz#2eb7dc3b0289718fc295f362753845c41a0c94ee" + integrity sha512-y11nGElTIV+CT3Zv9t7VKl+Q3hTQoT9a1Qzezhhl6Rp21gJ/IVTW7Z3y9EWXhuUBC2Shnf+DX0antecpAwSP8w== -yargs@^16.0.3, yargs@^16.2.0: +yargs@^16.0.3: version "16.2.0" resolved "https://registry.yarnpkg.com/yargs/-/yargs-16.2.0.tgz#1c82bf0f6b6a66eafce7ef30e376f49a12477f66" integrity sha512-D1mvvtDG0L5ft/jGWkLpG1+m0eQxOfaBvTNELraWj22wSVUMWxZUvYgJYcKh6jGGIkJFhH4IZPQhR4TKpc8mBw== @@ -4608,6 +4540,19 @@ yargs@^16.0.3, yargs@^16.2.0: y18n "^5.0.5" yargs-parser "^20.2.2" +yargs@^17.0.1: + version "17.0.1" + resolved "https://registry.yarnpkg.com/yargs/-/yargs-17.0.1.tgz#6a1ced4ed5ee0b388010ba9fd67af83b9362e0bb" + integrity sha512-xBBulfCc8Y6gLFcrPvtqKz9hz8SO0l1Ni8GgDekvBX2ro0HRQImDGnikfc33cgzcYUSncapnNcZDjVFIH3f6KQ== + dependencies: + cliui "^7.0.2" + escalade "^3.1.1" + get-caller-file "^2.0.5" + require-directory "^2.1.1" + string-width "^4.2.0" + y18n "^5.0.5" + yargs-parser "^20.2.2" + yauzl@^2.10.0: version "2.10.0" resolved "https://registry.yarnpkg.com/yauzl/-/yauzl-2.10.0.tgz#c7eb17c93e112cb1086fa6d8e51fb0667b79a5f9" diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/yarn.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/yarn.nix index 3e85c5d1bb..14e1b9902c 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/yarn.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/vieb/yarn.nix @@ -9,14 +9,6 @@ sha1 = "9274ec7460652f9c632c59addf24efb1684ef876"; }; } - { - name = "7zip_bin___7zip_bin_5.0.3.tgz"; - path = fetchurl { - name = "7zip_bin___7zip_bin_5.0.3.tgz"; - url = "https://registry.yarnpkg.com/7zip-bin/-/7zip-bin-5.0.3.tgz"; - sha1 = "bc5b5532ecafd923a61f2fb097e3b108c0106a3f"; - }; - } { name = "_babel_code_frame___code_frame_7.12.11.tgz"; path = fetchurl { @@ -26,163 +18,171 @@ }; } { - name = "_babel_code_frame___code_frame_7.12.13.tgz"; + name = "_babel_code_frame___code_frame_7.14.5.tgz"; path = fetchurl { - name = "_babel_code_frame___code_frame_7.12.13.tgz"; - url = "https://registry.yarnpkg.com/@babel/code-frame/-/code-frame-7.12.13.tgz"; - sha1 = "dcfc826beef65e75c50e21d3837d7d95798dd658"; + name = "_babel_code_frame___code_frame_7.14.5.tgz"; + url = "https://registry.yarnpkg.com/@babel/code-frame/-/code-frame-7.14.5.tgz"; + sha1 = "23b08d740e83f49c5e59945fbf1b43e80bbf4edb"; }; } { - name = "_babel_compat_data___compat_data_7.14.0.tgz"; + name = "_babel_compat_data___compat_data_7.14.5.tgz"; path = fetchurl { - name = "_babel_compat_data___compat_data_7.14.0.tgz"; - 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name = "_cliqz_adblocker_electron___adblocker_electron_1.20.6.tgz"; + name = "_cliqz_adblocker_electron_preload___adblocker_electron_preload_1.22.2.tgz"; path = fetchurl { - name = "_cliqz_adblocker_electron___adblocker_electron_1.20.6.tgz"; - url = "https://registry.yarnpkg.com/@cliqz/adblocker-electron/-/adblocker-electron-1.20.6.tgz"; - sha1 = "870ff1ba7765f545fee70327d3c7e08adadc7764"; + name = "_cliqz_adblocker_electron_preload___adblocker_electron_preload_1.22.2.tgz"; + url = "https://registry.yarnpkg.com/@cliqz/adblocker-electron-preload/-/adblocker-electron-preload-1.22.2.tgz"; + sha1 = "eea674767a60abe4e5f9ccb46188d33656f551d0"; }; } { - name = "_cliqz_adblocker_extended_selectors___adblocker_extended_selectors_1.20.6.tgz"; + name = "_cliqz_adblocker_electron___adblocker_electron_1.22.1.tgz"; path = fetchurl { - name = "_cliqz_adblocker_extended_selectors___adblocker_extended_selectors_1.20.6.tgz"; - url = "https://registry.yarnpkg.com/@cliqz/adblocker-extended-selectors/-/adblocker-extended-selectors-1.20.6.tgz"; - sha1 = "964d3b96e419778c6e4c8ecf5c2b94599dfbdcd7"; + name = "_cliqz_adblocker_electron___adblocker_electron_1.22.1.tgz"; + url = "https://registry.yarnpkg.com/@cliqz/adblocker-electron/-/adblocker-electron-1.22.1.tgz"; + sha1 = "13fe6de4be0c3beb2851634b27ea1223d10ca92b"; }; } { - name = "_cliqz_adblocker___adblocker_1.20.6.tgz"; + name = "_cliqz_adblocker_extended_selectors___adblocker_extended_selectors_1.22.2.tgz"; path = fetchurl { - name = "_cliqz_adblocker___adblocker_1.20.6.tgz"; - url = "https://registry.yarnpkg.com/@cliqz/adblocker/-/adblocker-1.20.6.tgz"; - sha1 = "3428d3c066dbaafa98644fadfd28dd206f8691e2"; + name = "_cliqz_adblocker_extended_selectors___adblocker_extended_selectors_1.22.2.tgz"; + url = "https://registry.yarnpkg.com/@cliqz/adblocker-extended-selectors/-/adblocker-extended-selectors-1.22.2.tgz"; + sha1 = "1cad3c1569b765d9e7f8672c85b2a7b1e8e9ee90"; + }; + } + { + name = "_cliqz_adblocker___adblocker_1.22.2.tgz"; + path = fetchurl { + name = "_cliqz_adblocker___adblocker_1.22.2.tgz"; + url = "https://registry.yarnpkg.com/@cliqz/adblocker/-/adblocker-1.22.2.tgz"; + sha1 = "99a14d56327734d3083a077d96fe7b91c236bf7a"; }; } { @@ -378,19 +386,19 @@ }; } { - name = "_electron_universal___universal_1.0.4.tgz"; + name = "_electron_universal___universal_1.0.5.tgz"; path = fetchurl { - name = "_electron_universal___universal_1.0.4.tgz"; - url = "https://registry.yarnpkg.com/@electron/universal/-/universal-1.0.4.tgz"; - sha1 = "231ac246c39d45b80e159bd21c3f9027dcaa10f5"; + name = "_electron_universal___universal_1.0.5.tgz"; + url = "https://registry.yarnpkg.com/@electron/universal/-/universal-1.0.5.tgz"; + sha1 = "b812340e4ef21da2b3ee77b2b4d35c9b86defe37"; }; } { - name = "_eslint_eslintrc___eslintrc_0.4.1.tgz"; + name = "_eslint_eslintrc___eslintrc_0.4.2.tgz"; path = fetchurl { - name = "_eslint_eslintrc___eslintrc_0.4.1.tgz"; - url = "https://registry.yarnpkg.com/@eslint/eslintrc/-/eslintrc-0.4.1.tgz"; - sha1 = "442763b88cecbe3ee0ec7ca6d6dd6168550cbf14"; + name = "_eslint_eslintrc___eslintrc_0.4.2.tgz"; + url = "https://registry.yarnpkg.com/@eslint/eslintrc/-/eslintrc-0.4.2.tgz"; + sha1 = "f63d0ef06f5c0c57d76c4ab5f63d3835c51b0179"; }; } { @@ -410,51 +418,51 @@ }; } { - name = "_jest_console___console_27.0.1.tgz"; + name = "_jest_console___console_27.0.2.tgz"; path = fetchurl { - name = "_jest_console___console_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/@jest/console/-/console-27.0.1.tgz"; - sha1 = "c6acfec201f9b6823596eb6c4fcd77c89a8b27e9"; + name = "_jest_console___console_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/@jest/console/-/console-27.0.2.tgz"; + sha1 = "b8eeff8f21ac51d224c851e1729d2630c18631e6"; }; } { - name = "_jest_core___core_27.0.1.tgz"; + name = "_jest_core___core_27.0.4.tgz"; path = fetchurl { - name = "_jest_core___core_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/@jest/core/-/core-27.0.1.tgz"; - sha1 = "88d0ff55f465fe1fc3a940718e8cf0fea242be4b"; + name = "_jest_core___core_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/@jest/core/-/core-27.0.4.tgz"; + sha1 = "679bf9ac07900da2ddbb9667bb1afa8029038f53"; }; } { - name = "_jest_environment___environment_27.0.1.tgz"; + name = "_jest_environment___environment_27.0.3.tgz"; path = fetchurl { - name = "_jest_environment___environment_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/@jest/environment/-/environment-27.0.1.tgz"; - sha1 = "27ed89bf8179c0a030690f063d922d6da7a519ac"; + name = "_jest_environment___environment_27.0.3.tgz"; + url = "https://registry.yarnpkg.com/@jest/environment/-/environment-27.0.3.tgz"; + sha1 = "68769b1dfdd213e3456169d64fbe9bd63a5fda92"; }; } { - name = "_jest_fake_timers___fake_timers_27.0.1.tgz"; + name = "_jest_fake_timers___fake_timers_27.0.3.tgz"; path = fetchurl { - name = "_jest_fake_timers___fake_timers_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/@jest/fake-timers/-/fake-timers-27.0.1.tgz"; - sha1 = "6987a596b0bcf8c07653086076c17058b4c77b5c"; + name = "_jest_fake_timers___fake_timers_27.0.3.tgz"; + url = "https://registry.yarnpkg.com/@jest/fake-timers/-/fake-timers-27.0.3.tgz"; + sha1 = "9899ba6304cc636734c74478df502e18136461dd"; }; } { - name = "_jest_globals___globals_27.0.1.tgz"; + name = "_jest_globals___globals_27.0.3.tgz"; path = fetchurl { - name = "_jest_globals___globals_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/@jest/globals/-/globals-27.0.1.tgz"; - sha1 = "14c776942f7047a04f2aea09b148065e2aa9d7e9"; + name = "_jest_globals___globals_27.0.3.tgz"; + url = "https://registry.yarnpkg.com/@jest/globals/-/globals-27.0.3.tgz"; + sha1 = "1cf8933b7791bba0b99305cbf39fd4d2e3fe4060"; }; } { - name = "_jest_reporters___reporters_27.0.1.tgz"; + name = "_jest_reporters___reporters_27.0.4.tgz"; path = fetchurl { - name = "_jest_reporters___reporters_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/@jest/reporters/-/reporters-27.0.1.tgz"; - sha1 = "5b491f64e37c9b97b13e564f18f36b6697d28045"; + name = "_jest_reporters___reporters_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/@jest/reporters/-/reporters-27.0.4.tgz"; + sha1 = "95609b1be97afb80d55d8aa3d7c3179c15810e65"; }; } { @@ -466,35 +474,35 @@ }; } { - name = "_jest_test_result___test_result_27.0.1.tgz"; + name = "_jest_test_result___test_result_27.0.2.tgz"; path = fetchurl { - name = "_jest_test_result___test_result_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/@jest/test-result/-/test-result-27.0.1.tgz"; - sha1 = "8fb97214268ea21cf8cfb83edc0f17e558b3466d"; + name = "_jest_test_result___test_result_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/@jest/test-result/-/test-result-27.0.2.tgz"; + sha1 = "0451049e32ceb609b636004ccc27c8fa22263f10"; }; } { - name = "_jest_test_sequencer___test_sequencer_27.0.1.tgz"; + name = "_jest_test_sequencer___test_sequencer_27.0.4.tgz"; path = fetchurl { - name = "_jest_test_sequencer___test_sequencer_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/@jest/test-sequencer/-/test-sequencer-27.0.1.tgz"; - sha1 = "2a3b85130978fc545d8ee6c34d65ff4231dbad86"; + name = "_jest_test_sequencer___test_sequencer_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/@jest/test-sequencer/-/test-sequencer-27.0.4.tgz"; + sha1 = "976493b277594d81e589896f0ed21f198308928a"; }; } { - name = "_jest_transform___transform_27.0.1.tgz"; + name = "_jest_transform___transform_27.0.2.tgz"; path = fetchurl { - name = "_jest_transform___transform_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/@jest/transform/-/transform-27.0.1.tgz"; - sha1 = "a9ece291f82273d5e58132550996c16edd5a902a"; + name = "_jest_transform___transform_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/@jest/transform/-/transform-27.0.2.tgz"; + sha1 = "b073b7c589e3f4b842102468875def2bb722d6b5"; }; } { - name = "_jest_types___types_27.0.1.tgz"; + name = "_jest_types___types_27.0.2.tgz"; path = fetchurl { - name = "_jest_types___types_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/@jest/types/-/types-27.0.1.tgz"; - sha1 = "631738c942e70045ebbf42a3f9b433036d3845e4"; + name = "_jest_types___types_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/@jest/types/-/types-27.0.2.tgz"; + sha1 = "e153d6c46bda0f2589f0702b071f9898c7bbd37e"; }; } { @@ -505,6 +513,14 @@ sha1 = "504af200af6b98e198bce768bc1730c6936ae01d"; }; } + { + name = "_malept_flatpak_bundler___flatpak_bundler_0.4.0.tgz"; + path = fetchurl { + name = "_malept_flatpak_bundler___flatpak_bundler_0.4.0.tgz"; + url = "https://registry.yarnpkg.com/@malept/flatpak-bundler/-/flatpak-bundler-0.4.0.tgz"; + sha1 = "e8a32c30a95d20c2b1bb635cc580981a06389858"; + }; + } { name = "_mdn_browser_compat_data___browser_compat_data_2.0.7.tgz"; path = fetchurl { @@ -578,11 +594,11 @@ }; } { - name = "_sinonjs_fake_timers___fake_timers_7.1.0.tgz"; + name = "_sinonjs_fake_timers___fake_timers_7.1.2.tgz"; path = fetchurl { - name = "_sinonjs_fake_timers___fake_timers_7.1.0.tgz"; - url = "https://registry.yarnpkg.com/@sinonjs/fake-timers/-/fake-timers-7.1.0.tgz"; - sha1 = "8f13af27d842cbf51ad4502e05562fe9391d084e"; + name = "_sinonjs_fake_timers___fake_timers_7.1.2.tgz"; + url = "https://registry.yarnpkg.com/@sinonjs/fake-timers/-/fake-timers-7.1.2.tgz"; + sha1 = "2524eae70c4910edccf99b2f4e6efc5894aff7b5"; }; } { @@ -634,11 +650,11 @@ }; } { - name = "_types_chrome___chrome_0.0.136.tgz"; + name = "_types_chrome___chrome_0.0.145.tgz"; path = fetchurl { - name = "_types_chrome___chrome_0.0.136.tgz"; - url = "https://registry.yarnpkg.com/@types/chrome/-/chrome-0.0.136.tgz"; - sha1 = "7c011b9f997b0156f25a140188a0c5689d3f368f"; + name = "_types_chrome___chrome_0.0.145.tgz"; + url = "https://registry.yarnpkg.com/@types/chrome/-/chrome-0.0.145.tgz"; + sha1 = "6c53ae0af5f25350b07bfd24cf459b5fe65cd9b8"; }; } { @@ -698,11 +714,11 @@ }; } { - name = "_types_har_format___har_format_1.2.5.tgz"; + name = "_types_har_format___har_format_1.2.6.tgz"; path = fetchurl { - name = "_types_har_format___har_format_1.2.5.tgz"; - url = "https://registry.yarnpkg.com/@types/har-format/-/har-format-1.2.5.tgz"; - sha1 = "4f6648814d0fdcb6a510e3364a9db439a753c4b1"; + name = "_types_har_format___har_format_1.2.6.tgz"; + url = "https://registry.yarnpkg.com/@types/har-format/-/har-format-1.2.6.tgz"; + sha1 = "471c83acdf6a2ea429620daee4c6dc1784a0e85f"; }; } { @@ -722,11 +738,11 @@ }; } { - name = "_types_istanbul_reports___istanbul_reports_3.0.0.tgz"; + name = "_types_istanbul_reports___istanbul_reports_3.0.1.tgz"; path = fetchurl { - name = "_types_istanbul_reports___istanbul_reports_3.0.0.tgz"; - url = "https://registry.yarnpkg.com/@types/istanbul-reports/-/istanbul-reports-3.0.0.tgz"; - sha1 = "508b13aa344fa4976234e75dddcc34925737d821"; + name = "_types_istanbul_reports___istanbul_reports_3.0.1.tgz"; + url = "https://registry.yarnpkg.com/@types/istanbul-reports/-/istanbul-reports-3.0.1.tgz"; + sha1 = "9153fe98bba2bd565a63add9436d6f0d7f8468ff"; }; } { @@ -738,19 +754,19 @@ }; } { - name = "_types_node___node_15.6.1.tgz"; + name = "_types_node___node_15.12.4.tgz"; path = fetchurl { - name = "_types_node___node_15.6.1.tgz"; - url = "https://registry.yarnpkg.com/@types/node/-/node-15.6.1.tgz"; - sha1 = "32d43390d5c62c5b6ec486a9bc9c59544de39a08"; + name = "_types_node___node_15.12.4.tgz"; + url = "https://registry.yarnpkg.com/@types/node/-/node-15.12.4.tgz"; + sha1 = "e1cf817d70a1e118e81922c4ff6683ce9d422e26"; }; } { - name = "_types_node___node_14.17.1.tgz"; + name = "_types_node___node_14.17.3.tgz"; path = fetchurl { - name = "_types_node___node_14.17.1.tgz"; - url = "https://registry.yarnpkg.com/@types/node/-/node-14.17.1.tgz"; - sha1 = "5e07e0cb2ff793aa7a1b41deae76221e6166049f"; + name = "_types_node___node_14.17.3.tgz"; + url = "https://registry.yarnpkg.com/@types/node/-/node-14.17.3.tgz"; + sha1 = "6d327abaa4be34a74e421ed6409a0ae2f47f4c3d"; }; } { @@ -762,11 +778,11 @@ }; } { - name = "_types_prettier___prettier_2.2.3.tgz"; + name = "_types_prettier___prettier_2.3.0.tgz"; path = fetchurl { - name = "_types_prettier___prettier_2.2.3.tgz"; - url = "https://registry.yarnpkg.com/@types/prettier/-/prettier-2.2.3.tgz"; - sha1 = "ef65165aea2924c9359205bf748865b8881753c0"; + name = "_types_prettier___prettier_2.3.0.tgz"; + url = "https://registry.yarnpkg.com/@types/prettier/-/prettier-2.3.0.tgz"; + sha1 = "2e8332cc7363f887d32ec5496b207d26ba8052bb"; }; } { @@ -793,14 +809,6 @@ sha1 = "dd3e6699ba3237f0348cd085e4698780204842f9"; }; } - { - name = "_types_yargs___yargs_15.0.13.tgz"; - path = fetchurl { - name = "_types_yargs___yargs_15.0.13.tgz"; - url = "https://registry.yarnpkg.com/@types/yargs/-/yargs-15.0.13.tgz"; - sha1 = "34f7fec8b389d7f3c1fd08026a5763e072d3c6dc"; - }; - } { name = "_types_yargs___yargs_16.0.3.tgz"; path = fetchurl { @@ -850,11 +858,11 @@ }; } { - name = "acorn___acorn_8.2.4.tgz"; + name = "acorn___acorn_8.4.0.tgz"; path = fetchurl { - name = "acorn___acorn_8.2.4.tgz"; - url = "https://registry.yarnpkg.com/acorn/-/acorn-8.2.4.tgz"; - sha1 = "caba24b08185c3b56e3168e97d15ed17f4d31fd0"; + name = "acorn___acorn_8.4.0.tgz"; + url = "https://registry.yarnpkg.com/acorn/-/acorn-8.4.0.tgz"; + sha1 = "af53266e698d7cffa416714b503066a82221be60"; }; } { @@ -882,11 +890,11 @@ }; } { - name = "ajv___ajv_8.5.0.tgz"; + name = "ajv___ajv_8.6.0.tgz"; path = fetchurl { - name = "ajv___ajv_8.5.0.tgz"; - url = "https://registry.yarnpkg.com/ajv/-/ajv-8.5.0.tgz"; - sha1 = "695528274bcb5afc865446aa275484049a18ae4b"; + name = "ajv___ajv_8.6.0.tgz"; + url = "https://registry.yarnpkg.com/ajv/-/ajv-8.6.0.tgz"; + sha1 = "60cc45d9c46a477d80d92c48076d972c342e5720"; }; } { @@ -970,19 +978,19 @@ }; } { - name = "app_builder_bin___app_builder_bin_3.5.12.tgz"; + name = "app_builder_bin___app_builder_bin_3.5.13.tgz"; path = fetchurl { - name = "app_builder_bin___app_builder_bin_3.5.12.tgz"; - url = "https://registry.yarnpkg.com/app-builder-bin/-/app-builder-bin-3.5.12.tgz"; - sha1 = "bbe174972cc1f481f73d6d92ad47a8b4c7eb4530"; + name = "app_builder_bin___app_builder_bin_3.5.13.tgz"; + url = "https://registry.yarnpkg.com/app-builder-bin/-/app-builder-bin-3.5.13.tgz"; + sha1 = "6dd7f4de34a4e408806f99b8c7d6ef1601305b7e"; }; } { - name = "app_builder_lib___app_builder_lib_22.10.5.tgz"; + name = "app_builder_lib___app_builder_lib_22.11.7.tgz"; path = fetchurl { - name = "app_builder_lib___app_builder_lib_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/app-builder-lib/-/app-builder-lib-22.10.5.tgz"; - sha1 = "24a88581c891e5b187a0d569aa44e7c4a0dc8de2"; + name = "app_builder_lib___app_builder_lib_22.11.7.tgz"; + url = "https://registry.yarnpkg.com/app-builder-lib/-/app-builder-lib-22.11.7.tgz"; + sha1 = "c0ad1119ebfbf4189a8280ad693625f5e684dca6"; }; } { @@ -1090,11 +1098,11 @@ }; } { - name = "babel_jest___babel_jest_27.0.1.tgz"; + name = "babel_jest___babel_jest_27.0.2.tgz"; path = fetchurl { - name = "babel_jest___babel_jest_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/babel-jest/-/babel-jest-27.0.1.tgz"; - sha1 = "9f1c4571ac17a39e599d1325dcaf53a274261df4"; + name = "babel_jest___babel_jest_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/babel-jest/-/babel-jest-27.0.2.tgz"; + sha1 = "7dc18adb01322acce62c2af76ea2c7cd186ade37"; }; } { @@ -1145,14 +1153,6 @@ sha1 = "1b1b440160a5bf7ad40b650f095963481903930a"; }; } - { - name = "binaryextensions___binaryextensions_4.15.0.tgz"; - path = fetchurl { - name = "binaryextensions___binaryextensions_4.15.0.tgz"; - url = "https://registry.yarnpkg.com/binaryextensions/-/binaryextensions-4.15.0.tgz"; - sha1 = "c63a502e0078ff1b0e9b00a9f74d3c2b0f8bd32e"; - }; - } { name = "bl___bl_4.1.0.tgz"; path = fetchurl { @@ -1178,11 +1178,11 @@ }; } { - name = "boolean___boolean_3.0.4.tgz"; + name = "boolean___boolean_3.1.2.tgz"; path = fetchurl { - name = "boolean___boolean_3.0.4.tgz"; - url = "https://registry.yarnpkg.com/boolean/-/boolean-3.0.4.tgz"; - sha1 = "aa1df8749af41d7211b66b4eee584722ff428c27"; + name = "boolean___boolean_3.1.2.tgz"; + url = "https://registry.yarnpkg.com/boolean/-/boolean-3.1.2.tgz"; + sha1 = "e30f210a26b02458482a8cc353ab06f262a780c2"; }; } { @@ -1266,19 +1266,27 @@ }; } { - name = "builder_util_runtime___builder_util_runtime_8.7.3.tgz"; + name = "builder_util_runtime___builder_util_runtime_8.7.6.tgz"; path = fetchurl { - name = "builder_util_runtime___builder_util_runtime_8.7.3.tgz"; - url = "https://registry.yarnpkg.com/builder-util-runtime/-/builder-util-runtime-8.7.3.tgz"; - sha1 = "0aaafa52d25295c939496f62231ca9ff06c30e40"; + name = "builder_util_runtime___builder_util_runtime_8.7.6.tgz"; + url = "https://registry.yarnpkg.com/builder-util-runtime/-/builder-util-runtime-8.7.6.tgz"; + sha1 = "4b43c96db2bd494ced7694bcd7674934655e8324"; }; } { - name = "builder_util___builder_util_22.10.5.tgz"; + name = "builder_util_runtime___builder_util_runtime_8.7.7.tgz"; path = fetchurl { - name = "builder_util___builder_util_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/builder-util/-/builder-util-22.10.5.tgz"; - sha1 = "8d0b04a3be6acc74938679aa90dcb3181b1ae86b"; + name = "builder_util_runtime___builder_util_runtime_8.7.7.tgz"; + url = "https://registry.yarnpkg.com/builder-util-runtime/-/builder-util-runtime-8.7.7.tgz"; + sha1 = "6c83cc3abe7a7a5c8b4ec8878f68adc828c07f0d"; + }; + } + { + name = "builder_util___builder_util_22.11.7.tgz"; + path = fetchurl { + name = "builder_util___builder_util_22.11.7.tgz"; + url = "https://registry.yarnpkg.com/builder-util/-/builder-util-22.11.7.tgz"; + sha1 = "ae9707afa6a31feafa13c274ac83b4fe28ef1467"; }; } { @@ -1314,11 +1322,11 @@ }; } { - name = "caniuse_lite___caniuse_lite_1.0.30001230.tgz"; + name = "caniuse_lite___caniuse_lite_1.0.30001239.tgz"; path = fetchurl { - name = "caniuse_lite___caniuse_lite_1.0.30001230.tgz"; - url = "https://registry.yarnpkg.com/caniuse-lite/-/caniuse-lite-1.0.30001230.tgz"; - sha1 = "8135c57459854b2240b57a4a6786044bdc5a9f71"; + name = "caniuse_lite___caniuse_lite_1.0.30001239.tgz"; + url = "https://registry.yarnpkg.com/caniuse-lite/-/caniuse-lite-1.0.30001239.tgz"; + sha1 = "66e8669985bb2cb84ccb10f68c25ce6dd3e4d2b8"; }; } { @@ -1362,11 +1370,11 @@ }; } { - name = "ci_info___ci_info_3.1.1.tgz"; + name = "ci_info___ci_info_3.2.0.tgz"; path = fetchurl { - name = "ci_info___ci_info_3.1.1.tgz"; - url = "https://registry.yarnpkg.com/ci-info/-/ci-info-3.1.1.tgz"; - sha1 = "9a32fcefdf7bcdb6f0a7e1c0f8098ec57897b80a"; + name = "ci_info___ci_info_3.2.0.tgz"; + url = "https://registry.yarnpkg.com/ci-info/-/ci-info-3.2.0.tgz"; + sha1 = "2876cb948a498797b5236f0095bc057d0dca38b6"; }; } { @@ -1498,11 +1506,11 @@ }; } { - name = "compress_commons___compress_commons_4.1.0.tgz"; + name = "compress_commons___compress_commons_4.1.1.tgz"; path = fetchurl { - name = "compress_commons___compress_commons_4.1.0.tgz"; - url = "https://registry.yarnpkg.com/compress-commons/-/compress-commons-4.1.0.tgz"; - sha1 = "25ec7a4528852ccd1d441a7d4353cd0ece11371b"; + name = "compress_commons___compress_commons_4.1.1.tgz"; + url = "https://registry.yarnpkg.com/compress-commons/-/compress-commons-4.1.1.tgz"; + sha1 = "df2a09a7ed17447642bad10a85cc9a19e5c42a7d"; }; } { @@ -1522,11 +1530,11 @@ }; } { - name = "config_chain___config_chain_1.1.12.tgz"; + name = "config_chain___config_chain_1.1.13.tgz"; path = fetchurl { - name = "config_chain___config_chain_1.1.12.tgz"; - url = "https://registry.yarnpkg.com/config-chain/-/config-chain-1.1.12.tgz"; - sha1 = "0fde8d091200eb5e808caf25fe618c02f48e4efa"; + name = "config_chain___config_chain_1.1.13.tgz"; + url = "https://registry.yarnpkg.com/config-chain/-/config-chain-1.1.13.tgz"; + sha1 = "fad0795aa6a6cdaff9ed1b68e9dff94372c232f4"; }; } { @@ -1538,19 +1546,19 @@ }; } { - name = "convert_source_map___convert_source_map_1.7.0.tgz"; + name = "convert_source_map___convert_source_map_1.8.0.tgz"; path = fetchurl { - name = "convert_source_map___convert_source_map_1.7.0.tgz"; - url = "https://registry.yarnpkg.com/convert-source-map/-/convert-source-map-1.7.0.tgz"; - sha1 = "17a2cb882d7f77d3490585e2ce6c524424a3a442"; + name = "convert_source_map___convert_source_map_1.8.0.tgz"; + url = "https://registry.yarnpkg.com/convert-source-map/-/convert-source-map-1.8.0.tgz"; + sha1 = "f3373c32d21b4d780dd8004514684fb791ca4369"; }; } { - name = "core_js___core_js_3.13.0.tgz"; + name = "core_js___core_js_3.15.0.tgz"; path = fetchurl { - name = "core_js___core_js_3.13.0.tgz"; - url = "https://registry.yarnpkg.com/core-js/-/core-js-3.13.0.tgz"; - sha1 = "58ca436bf01d6903aee3d364089868d0d89fe58d"; + name = "core_js___core_js_3.15.0.tgz"; + url = "https://registry.yarnpkg.com/core-js/-/core-js-3.15.0.tgz"; + sha1 = "db9554ebce0b6fd90dc9b1f2465c841d2d055044"; }; } { @@ -1762,11 +1770,11 @@ }; } { - name = "dmg_builder___dmg_builder_22.10.5.tgz"; + name = "dmg_builder___dmg_builder_22.11.7.tgz"; path = fetchurl { - name = "dmg_builder___dmg_builder_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/dmg-builder/-/dmg-builder-22.10.5.tgz"; - sha1 = "65a33c106ead5a350c7de8997c546559bd6e0e7c"; + name = "dmg_builder___dmg_builder_22.11.7.tgz"; + url = "https://registry.yarnpkg.com/dmg-builder/-/dmg-builder-22.11.7.tgz"; + sha1 = "5956008c18d40ee72c0ea01ffea9590dbf51df89"; }; } { @@ -1810,11 +1818,11 @@ }; } { - name = "dotenv___dotenv_8.6.0.tgz"; + name = "dotenv___dotenv_9.0.2.tgz"; path = fetchurl { - name = "dotenv___dotenv_8.6.0.tgz"; - url = "https://registry.yarnpkg.com/dotenv/-/dotenv-8.6.0.tgz"; - sha1 = "061af664d19f7f4d8fc6e4ff9b584ce237adcb8b"; + name = "dotenv___dotenv_9.0.2.tgz"; + url = "https://registry.yarnpkg.com/dotenv/-/dotenv-9.0.2.tgz"; + sha1 = "dacc20160935a37dea6364aa1bef819fb9b6ab05"; }; } { @@ -1825,14 +1833,6 @@ sha1 = "ee01dd1cac0ed3cbc7fdbea37dc0a8f1ce002ce2"; }; } - { - name = "editions___editions_6.1.0.tgz"; - path = fetchurl { - name = "editions___editions_6.1.0.tgz"; - url = "https://registry.yarnpkg.com/editions/-/editions-6.1.0.tgz"; - sha1 = "ba6c6cf9f4bb571d9e53ea34e771a602e5a66549"; - }; - } { name = "ejs___ejs_3.1.6.tgz"; path = fetchurl { @@ -1842,35 +1842,35 @@ }; } { - name = "electron_builder___electron_builder_22.10.5.tgz"; + name = "electron_builder___electron_builder_22.11.7.tgz"; path = fetchurl { - name = "electron_builder___electron_builder_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/electron-builder/-/electron-builder-22.10.5.tgz"; - sha1 = "03b156b93e6012609027c3aaa69201a3ad21e454"; + name = "electron_builder___electron_builder_22.11.7.tgz"; + url = "https://registry.yarnpkg.com/electron-builder/-/electron-builder-22.11.7.tgz"; + sha1 = "cd97a0d9f6e6d388112e66b4376de431cca4d596"; }; } { - name = "electron_publish___electron_publish_22.10.5.tgz"; + name = "electron_publish___electron_publish_22.11.7.tgz"; path = fetchurl { - name = "electron_publish___electron_publish_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/electron-publish/-/electron-publish-22.10.5.tgz"; - sha1 = "9cbe46266b6c79d8c6e99840755682e2262d3543"; + name = "electron_publish___electron_publish_22.11.7.tgz"; + url = "https://registry.yarnpkg.com/electron-publish/-/electron-publish-22.11.7.tgz"; + sha1 = "4126cbb08ccf082a2aa7fef89ee629b3a4b8ae9a"; }; } { - name = "electron_to_chromium___electron_to_chromium_1.3.739.tgz"; + name = "electron_to_chromium___electron_to_chromium_1.3.752.tgz"; path = fetchurl { - name = "electron_to_chromium___electron_to_chromium_1.3.739.tgz"; - url = "https://registry.yarnpkg.com/electron-to-chromium/-/electron-to-chromium-1.3.739.tgz"; - sha1 = "f07756aa92cabd5a6eec6f491525a64fe62f98b9"; + name = "electron_to_chromium___electron_to_chromium_1.3.752.tgz"; + url = "https://registry.yarnpkg.com/electron-to-chromium/-/electron-to-chromium-1.3.752.tgz"; + sha1 = "0728587f1b9b970ec9ffad932496429aef750d09"; }; } { - name = "electron___electron_13.0.1.tgz"; + name = "electron___electron_13.1.2.tgz"; path = fetchurl { - name = "electron___electron_13.0.1.tgz"; - url = "https://registry.yarnpkg.com/electron/-/electron-13.0.1.tgz"; - sha1 = "7dd3666f0f966ab83a1f9868d84add2e6205d43a"; + name = "electron___electron_13.1.2.tgz"; + url = "https://registry.yarnpkg.com/electron/-/electron-13.1.2.tgz"; + sha1 = "8c9abf9015766c9cbc16f10c99282d00d6ae1b90"; }; } { @@ -1929,14 +1929,6 @@ sha1 = "420399d416ce1fbe9bc0a07c62fa68d67fd0f8f2"; }; } - { - name = "errlop___errlop_4.1.0.tgz"; - path = fetchurl { - name = "errlop___errlop_4.1.0.tgz"; - url = "https://registry.yarnpkg.com/errlop/-/errlop-4.1.0.tgz"; - sha1 = "8e7b8f4f1bf0a6feafce4d14f0c0cf4bf5ef036b"; - }; - } { name = "es6_error___es6_error_4.1.1.tgz"; path = fetchurl { @@ -2042,11 +2034,11 @@ }; } { - name = "eslint___eslint_7.27.0.tgz"; + name = "eslint___eslint_7.29.0.tgz"; path = fetchurl { - name = "eslint___eslint_7.27.0.tgz"; - url = "https://registry.yarnpkg.com/eslint/-/eslint-7.27.0.tgz"; - sha1 = "665a1506d8f95655c9274d84bd78f7166b07e9c7"; + name = "eslint___eslint_7.29.0.tgz"; + url = "https://registry.yarnpkg.com/eslint/-/eslint-7.29.0.tgz"; + sha1 = "ee2a7648f2e729485e4d0bd6383ec1deabc8b3c0"; }; } { @@ -2106,11 +2098,11 @@ }; } { - name = "execa___execa_5.0.0.tgz"; + name = "execa___execa_5.1.1.tgz"; path = fetchurl { - name = "execa___execa_5.0.0.tgz"; - url = "https://registry.yarnpkg.com/execa/-/execa-5.0.0.tgz"; - sha1 = "4029b0007998a841fbd1032e5f4de86a3c1e3376"; + name = "execa___execa_5.1.1.tgz"; + url = "https://registry.yarnpkg.com/execa/-/execa-5.1.1.tgz"; + sha1 = "f80ad9cbf4298f7bd1d4c9555c21e93741c411dd"; }; } { @@ -2130,11 +2122,11 @@ }; } { - name = "expect___expect_27.0.1.tgz"; + name = "expect___expect_27.0.2.tgz"; path = fetchurl { - name = "expect___expect_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/expect/-/expect-27.0.1.tgz"; - sha1 = "1290c74fef8d62f15f4c5dd1d7233001909abbfb"; + name = "expect___expect_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/expect/-/expect-27.0.2.tgz"; + sha1 = "e66ca3a4c9592f1c019fa1d46459a9d2084f3422"; }; } { @@ -2426,19 +2418,11 @@ }; } { - name = "globals___globals_12.4.0.tgz"; + name = "globals___globals_13.9.0.tgz"; path = fetchurl { - name = "globals___globals_12.4.0.tgz"; - url = "https://registry.yarnpkg.com/globals/-/globals-12.4.0.tgz"; - sha1 = "a18813576a41b00a24a97e7f815918c2e19925f8"; - }; - } - { - name = "globals___globals_13.8.0.tgz"; - path = fetchurl { - name = "globals___globals_13.8.0.tgz"; - url = "https://registry.yarnpkg.com/globals/-/globals-13.8.0.tgz"; - sha1 = "3e20f504810ce87a8d72e55aecf8435b50f4c1b3"; + name = "globals___globals_13.9.0.tgz"; + url = "https://registry.yarnpkg.com/globals/-/globals-13.9.0.tgz"; + sha1 = "4bf2bf635b334a173fb1daf7c5e6b218ecdc06cb"; }; } { @@ -2505,14 +2489,6 @@ sha1 = "722d7cbfc1f6aa8241f16dd814e011e1f41e8796"; }; } - { - name = "hosted_git_info___hosted_git_info_3.0.8.tgz"; - path = fetchurl { - name = "hosted_git_info___hosted_git_info_3.0.8.tgz"; - url = "https://registry.yarnpkg.com/hosted-git-info/-/hosted-git-info-3.0.8.tgz"; - sha1 = "6e35d4cc87af2c5f816e4cb9ce350ba87a3f370d"; - }; - } { name = "hosted_git_info___hosted_git_info_4.0.2.tgz"; path = fetchurl { @@ -2825,6 +2801,14 @@ sha1 = "bb935d48582cba168c06834957a54a3e07124f11"; }; } + { + name = "isbinaryfile___isbinaryfile_4.0.8.tgz"; + path = fetchurl { + name = "isbinaryfile___isbinaryfile_4.0.8.tgz"; + url = "https://registry.yarnpkg.com/isbinaryfile/-/isbinaryfile-4.0.8.tgz"; + sha1 = "5d34b94865bd4946633ecc78a026fc76c5b11fcf"; + }; + } { name = "isexe___isexe_2.0.0.tgz"; path = fetchurl { @@ -2873,14 +2857,6 @@ sha1 = "d593210e5000683750cb09fc0644e4b6e27fd53b"; }; } - { - name = "istextorbinary___istextorbinary_5.12.0.tgz"; - path = fetchurl { - name = "istextorbinary___istextorbinary_5.12.0.tgz"; - url = "https://registry.yarnpkg.com/istextorbinary/-/istextorbinary-5.12.0.tgz"; - sha1 = "2f84777838668fdf524c305a2363d6057aaeec84"; - }; - } { name = "jake___jake_10.8.2.tgz"; path = fetchurl { @@ -2890,43 +2866,43 @@ }; } { - name = "jest_changed_files___jest_changed_files_27.0.1.tgz"; + name = "jest_changed_files___jest_changed_files_27.0.2.tgz"; path = fetchurl { - name = "jest_changed_files___jest_changed_files_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-changed-files/-/jest-changed-files-27.0.1.tgz"; - sha1 = "b8356b3708cac9d05ebf6f9e0b32227b514945c8"; + name = "jest_changed_files___jest_changed_files_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-changed-files/-/jest-changed-files-27.0.2.tgz"; + sha1 = "997253042b4a032950fc5f56abf3c5d1f8560801"; }; } { - name = "jest_circus___jest_circus_27.0.1.tgz"; + name = "jest_circus___jest_circus_27.0.4.tgz"; path = fetchurl { - name = "jest_circus___jest_circus_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-circus/-/jest-circus-27.0.1.tgz"; - sha1 = "3a7ec9e9fd60ef4c827197dffe2288aa19f86678"; + name = "jest_circus___jest_circus_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/jest-circus/-/jest-circus-27.0.4.tgz"; + sha1 = "3b261514ee3b3da33def736a6352c98ff56bb6e6"; }; } { - name = "jest_cli___jest_cli_27.0.1.tgz"; + name = "jest_cli___jest_cli_27.0.4.tgz"; path = fetchurl { - name = "jest_cli___jest_cli_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-cli/-/jest-cli-27.0.1.tgz"; - sha1 = "9accc8a505438571ee423438eac526a7ee4654b5"; + name = "jest_cli___jest_cli_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/jest-cli/-/jest-cli-27.0.4.tgz"; + sha1 = "491b12c754c0d7c6873b13a66f26b3a80a852910"; }; } { - name = "jest_config___jest_config_27.0.1.tgz"; + name = "jest_config___jest_config_27.0.4.tgz"; path = fetchurl { - name = "jest_config___jest_config_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-config/-/jest-config-27.0.1.tgz"; - sha1 = "db4f202efcbb92011f62d8f25b52c3d1bd5672d4"; + name = "jest_config___jest_config_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/jest-config/-/jest-config-27.0.4.tgz"; + sha1 = "c4f41378acf40ca77860fb4e213b12109d87b8cf"; }; } { - name = "jest_diff___jest_diff_27.0.1.tgz"; + name = "jest_diff___jest_diff_27.0.2.tgz"; path = fetchurl { - name = "jest_diff___jest_diff_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-diff/-/jest-diff-27.0.1.tgz"; - sha1 = "021beb29fe9f07e83c809a4f7a1ce807b229c4ab"; + name = "jest_diff___jest_diff_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-diff/-/jest-diff-27.0.2.tgz"; + sha1 = "f315b87cee5dc134cf42c2708ab27375cc3f5a7e"; }; } { @@ -2938,27 +2914,27 @@ }; } { - name = "jest_each___jest_each_27.0.1.tgz"; + name = "jest_each___jest_each_27.0.2.tgz"; path = fetchurl { - name = "jest_each___jest_each_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-each/-/jest-each-27.0.1.tgz"; - sha1 = "37fa20b7d809b29d4349d8eb7d01f17c2feeab10"; + name = "jest_each___jest_each_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-each/-/jest-each-27.0.2.tgz"; + sha1 = "865ddb4367476ced752167926b656fa0dcecd8c7"; }; } { - name = "jest_environment_jsdom___jest_environment_jsdom_27.0.1.tgz"; + name = "jest_environment_jsdom___jest_environment_jsdom_27.0.3.tgz"; path = fetchurl { - name = "jest_environment_jsdom___jest_environment_jsdom_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-environment-jsdom/-/jest-environment-jsdom-27.0.1.tgz"; - sha1 = "12b0ed587fb53e0a581a5101bb209aef09da2310"; + name = "jest_environment_jsdom___jest_environment_jsdom_27.0.3.tgz"; + url = "https://registry.yarnpkg.com/jest-environment-jsdom/-/jest-environment-jsdom-27.0.3.tgz"; + sha1 = "ed73e913ddc03864eb9f934b5cbabf1b63504e2e"; }; } { - name = "jest_environment_node___jest_environment_node_27.0.1.tgz"; + name = "jest_environment_node___jest_environment_node_27.0.3.tgz"; path = fetchurl { - name = "jest_environment_node___jest_environment_node_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-environment-node/-/jest-environment-node-27.0.1.tgz"; - sha1 = "7d7df7ae191477a823ffb4fcc0772b4c23ec5c87"; + name = "jest_environment_node___jest_environment_node_27.0.3.tgz"; + url = "https://registry.yarnpkg.com/jest-environment-node/-/jest-environment-node-27.0.3.tgz"; + sha1 = "b4acb3679d2552a4215732cab8b0ca7ec4398ee0"; }; } { @@ -2970,51 +2946,51 @@ }; } { - name = "jest_haste_map___jest_haste_map_27.0.1.tgz"; + name = "jest_haste_map___jest_haste_map_27.0.2.tgz"; path = fetchurl { - name = "jest_haste_map___jest_haste_map_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-haste-map/-/jest-haste-map-27.0.1.tgz"; - sha1 = "653c4ba59309a86499ad7bf663176e7f97478191"; + name = "jest_haste_map___jest_haste_map_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-haste-map/-/jest-haste-map-27.0.2.tgz"; + sha1 = "3f1819400c671237e48b4d4b76a80a0dbed7577f"; }; } { - name = "jest_jasmine2___jest_jasmine2_27.0.1.tgz"; + name = "jest_jasmine2___jest_jasmine2_27.0.4.tgz"; path = fetchurl { - name = "jest_jasmine2___jest_jasmine2_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-jasmine2/-/jest-jasmine2-27.0.1.tgz"; - sha1 = "d975bfe072f3ac3596c0be5fc0a1215fd2e91e77"; + name = "jest_jasmine2___jest_jasmine2_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/jest-jasmine2/-/jest-jasmine2-27.0.4.tgz"; + sha1 = "c669519ccf4904a485338555e1e66cad36bb0670"; }; } { - name = "jest_leak_detector___jest_leak_detector_27.0.1.tgz"; + name = "jest_leak_detector___jest_leak_detector_27.0.2.tgz"; path = fetchurl { - name = "jest_leak_detector___jest_leak_detector_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-leak-detector/-/jest-leak-detector-27.0.1.tgz"; - sha1 = "eedeaee7c0ab553db4d8908f74967329624342b9"; + name = "jest_leak_detector___jest_leak_detector_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-leak-detector/-/jest-leak-detector-27.0.2.tgz"; + sha1 = "ce19aa9dbcf7a72a9d58907a970427506f624e69"; }; } { - name = "jest_matcher_utils___jest_matcher_utils_27.0.1.tgz"; + name = "jest_matcher_utils___jest_matcher_utils_27.0.2.tgz"; path = fetchurl { - name = "jest_matcher_utils___jest_matcher_utils_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-matcher-utils/-/jest-matcher-utils-27.0.1.tgz"; - sha1 = "7a01330786e370f152b0b0159f827293b6322909"; + name = "jest_matcher_utils___jest_matcher_utils_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-matcher-utils/-/jest-matcher-utils-27.0.2.tgz"; + sha1 = "f14c060605a95a466cdc759acc546c6f4cbfc4f0"; }; } { - name = "jest_message_util___jest_message_util_27.0.1.tgz"; + name = "jest_message_util___jest_message_util_27.0.2.tgz"; path = fetchurl { - name = "jest_message_util___jest_message_util_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-message-util/-/jest-message-util-27.0.1.tgz"; - sha1 = "382b7c55d8e0b1aba9eeb41d3cfdd34e451210ed"; + name = "jest_message_util___jest_message_util_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-message-util/-/jest-message-util-27.0.2.tgz"; + sha1 = "181c9b67dff504d8f4ad15cba10d8b80f272048c"; }; } { - name = "jest_mock___jest_mock_27.0.1.tgz"; + name = "jest_mock___jest_mock_27.0.3.tgz"; path = fetchurl { - name = "jest_mock___jest_mock_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-mock/-/jest-mock-27.0.1.tgz"; - sha1 = "8394e297bc3dfed980961622cb51fd042b4acf5a"; + name = "jest_mock___jest_mock_27.0.3.tgz"; + url = "https://registry.yarnpkg.com/jest-mock/-/jest-mock-27.0.3.tgz"; + sha1 = "5591844f9192b3335c0dca38e8e45ed297d4d23d"; }; } { @@ -3034,35 +3010,35 @@ }; } { - name = "jest_resolve_dependencies___jest_resolve_dependencies_27.0.1.tgz"; + name = "jest_resolve_dependencies___jest_resolve_dependencies_27.0.4.tgz"; path = fetchurl { - name = "jest_resolve_dependencies___jest_resolve_dependencies_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-resolve-dependencies/-/jest-resolve-dependencies-27.0.1.tgz"; - sha1 = "3dcaeb277e0253747706467e8f05e1e78a1d534d"; + name = "jest_resolve_dependencies___jest_resolve_dependencies_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/jest-resolve-dependencies/-/jest-resolve-dependencies-27.0.4.tgz"; + sha1 = "a07a242d70d668afd3fcf7f4270755eebb1fe579"; }; } { - name = "jest_resolve___jest_resolve_27.0.1.tgz"; + name = "jest_resolve___jest_resolve_27.0.4.tgz"; path = fetchurl { - name = "jest_resolve___jest_resolve_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-resolve/-/jest-resolve-27.0.1.tgz"; - sha1 = "4e1b76f61c7e2213d2fbd37342800864309de538"; + name = "jest_resolve___jest_resolve_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/jest-resolve/-/jest-resolve-27.0.4.tgz"; + sha1 = "8a27bc3f2f00c8ea28f3bc99bbf6f468300a703d"; }; } { - name = "jest_runner___jest_runner_27.0.1.tgz"; + name = "jest_runner___jest_runner_27.0.4.tgz"; path = fetchurl { - name = "jest_runner___jest_runner_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-runner/-/jest-runner-27.0.1.tgz"; - sha1 = "52137173fbf318b7b1f034b81200c2846758f681"; + name = "jest_runner___jest_runner_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/jest-runner/-/jest-runner-27.0.4.tgz"; + sha1 = "2787170a9509b792ae129794f6944d27d5d12a4f"; }; } { - name = "jest_runtime___jest_runtime_27.0.1.tgz"; + name = "jest_runtime___jest_runtime_27.0.4.tgz"; path = fetchurl { - name = "jest_runtime___jest_runtime_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-runtime/-/jest-runtime-27.0.1.tgz"; - sha1 = "b71bb8ea189c50525aebb4aba6c524633ca27659"; + name = "jest_runtime___jest_runtime_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/jest-runtime/-/jest-runtime-27.0.4.tgz"; + sha1 = "2e4a6aa77cac32ac612dfe12768387a8aa15c2f0"; }; } { @@ -3074,51 +3050,51 @@ }; } { - name = "jest_snapshot___jest_snapshot_27.0.1.tgz"; + name = "jest_snapshot___jest_snapshot_27.0.4.tgz"; path = fetchurl { - name = "jest_snapshot___jest_snapshot_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-snapshot/-/jest-snapshot-27.0.1.tgz"; - sha1 = "01a82d901f260604908373795c9255b032d2a07a"; + name = "jest_snapshot___jest_snapshot_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/jest-snapshot/-/jest-snapshot-27.0.4.tgz"; + sha1 = "2b96e22ca90382b3e93bd0aae2ce4c78bf51fb5b"; }; } { - name = "jest_util___jest_util_27.0.1.tgz"; + name = "jest_util___jest_util_27.0.2.tgz"; path = fetchurl { - name = "jest_util___jest_util_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-util/-/jest-util-27.0.1.tgz"; - sha1 = "324ed9879d129c1e64f9169a739d6d50d7928769"; + name = "jest_util___jest_util_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-util/-/jest-util-27.0.2.tgz"; + sha1 = "fc2c7ace3c75ae561cf1e5fdb643bf685a5be7c7"; }; } { - name = "jest_validate___jest_validate_27.0.1.tgz"; + name = "jest_validate___jest_validate_27.0.2.tgz"; path = fetchurl { - name = "jest_validate___jest_validate_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-validate/-/jest-validate-27.0.1.tgz"; - sha1 = "8e43428674b6097f8ee3abe42c4248a4826cd008"; + name = "jest_validate___jest_validate_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-validate/-/jest-validate-27.0.2.tgz"; + sha1 = "7fe2c100089449cd5cbb47a5b0b6cb7cda5beee5"; }; } { - name = "jest_watcher___jest_watcher_27.0.1.tgz"; + name = "jest_watcher___jest_watcher_27.0.2.tgz"; path = fetchurl { - name = "jest_watcher___jest_watcher_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-watcher/-/jest-watcher-27.0.1.tgz"; - sha1 = "61b9403d7b498161f6aa6124602363525ac3efc2"; + name = "jest_watcher___jest_watcher_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-watcher/-/jest-watcher-27.0.2.tgz"; + sha1 = "dab5f9443e2d7f52597186480731a8c6335c5deb"; }; } { - name = "jest_worker___jest_worker_27.0.1.tgz"; + name = "jest_worker___jest_worker_27.0.2.tgz"; path = fetchurl { - name = "jest_worker___jest_worker_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest-worker/-/jest-worker-27.0.1.tgz"; - sha1 = "b255fcbb40fb467295010c628474b1185cab4f9e"; + name = "jest_worker___jest_worker_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-worker/-/jest-worker-27.0.2.tgz"; + sha1 = "4ebeb56cef48b3e7514552f80d0d80c0129f0b05"; }; } { - name = "jest___jest_27.0.1.tgz"; + name = "jest___jest_27.0.4.tgz"; path = fetchurl { - name = "jest___jest_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/jest/-/jest-27.0.1.tgz"; - sha1 = "d3822f0904f3bbe884bea393cede2be2aa290d0e"; + name = "jest___jest_27.0.4.tgz"; + url = "https://registry.yarnpkg.com/jest/-/jest-27.0.4.tgz"; + sha1 = "91d4d564b36bcf93b98dac1ab19f07089e670f53"; }; } { @@ -3442,19 +3418,19 @@ }; } { - name = "mime_db___mime_db_1.47.0.tgz"; + name = "mime_db___mime_db_1.48.0.tgz"; path = fetchurl { - name = "mime_db___mime_db_1.47.0.tgz"; - url = "https://registry.yarnpkg.com/mime-db/-/mime-db-1.47.0.tgz"; - sha1 = "8cb313e59965d3c05cfbf898915a267af46a335c"; + name = "mime_db___mime_db_1.48.0.tgz"; + url = "https://registry.yarnpkg.com/mime-db/-/mime-db-1.48.0.tgz"; + sha1 = "e35b31045dd7eada3aaad537ed88a33afbef2d1d"; }; } { - name = "mime_types___mime_types_2.1.30.tgz"; + name = "mime_types___mime_types_2.1.31.tgz"; path = fetchurl { - name = "mime_types___mime_types_2.1.30.tgz"; - url = "https://registry.yarnpkg.com/mime-types/-/mime-types-2.1.30.tgz"; - sha1 = "6e7be8b4c479825f85ed6326695db73f9305d62d"; + name = "mime_types___mime_types_2.1.31.tgz"; + url = "https://registry.yarnpkg.com/mime-types/-/mime-types-2.1.31.tgz"; + sha1 = "a00d76b74317c61f9c2db2218b8e9f8e9c5c9e6b"; }; } { @@ -3554,19 +3530,11 @@ }; } { - name = "node_releases___node_releases_1.1.72.tgz"; + name = "node_releases___node_releases_1.1.73.tgz"; path = fetchurl { - name = "node_releases___node_releases_1.1.72.tgz"; - url = "https://registry.yarnpkg.com/node-releases/-/node-releases-1.1.72.tgz"; - sha1 = "14802ab6b1039a79a0c7d662b610a5bbd76eacbe"; - }; - } - { - name = "normalize_package_data___normalize_package_data_3.0.2.tgz"; - path = fetchurl { - name = "normalize_package_data___normalize_package_data_3.0.2.tgz"; - url = "https://registry.yarnpkg.com/normalize-package-data/-/normalize-package-data-3.0.2.tgz"; - sha1 = "cae5c410ae2434f9a6c1baa65d5bc3b9366c8699"; + name = "node_releases___node_releases_1.1.73.tgz"; + url = "https://registry.yarnpkg.com/node-releases/-/node-releases-1.1.73.tgz"; + sha1 = "dd4e81ddd5277ff846b80b52bb40c49edf7a7b20"; }; } { @@ -3818,11 +3786,11 @@ }; } { - name = "pretty_format___pretty_format_27.0.1.tgz"; + name = "pretty_format___pretty_format_27.0.2.tgz"; path = fetchurl { - name = "pretty_format___pretty_format_27.0.1.tgz"; - url = "https://registry.yarnpkg.com/pretty-format/-/pretty-format-27.0.1.tgz"; - sha1 = "c4094621dfbd3e8ab751964d1cf01edc6f88474d"; + name = "pretty_format___pretty_format_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/pretty-format/-/pretty-format-27.0.2.tgz"; + sha1 = "9283ff8c4f581b186b2d4da461617143dca478a4"; }; } { @@ -3914,11 +3882,11 @@ }; } { - name = "read_config_file___read_config_file_6.0.0.tgz"; + name = "read_config_file___read_config_file_6.2.0.tgz"; path = fetchurl { - name = "read_config_file___read_config_file_6.0.0.tgz"; - url = "https://registry.yarnpkg.com/read-config-file/-/read-config-file-6.0.0.tgz"; - sha1 = "224b5dca6a5bdc1fb19e63f89f342680efdb9299"; + name = "read_config_file___read_config_file_6.2.0.tgz"; + url = "https://registry.yarnpkg.com/read-config-file/-/read-config-file-6.2.0.tgz"; + sha1 = "71536072330bcd62ba814f91458b12add9fc7ade"; }; } { @@ -3946,11 +3914,11 @@ }; } { - name = "regexpp___regexpp_3.1.0.tgz"; + name = "regexpp___regexpp_3.2.0.tgz"; path = fetchurl { - name = "regexpp___regexpp_3.1.0.tgz"; - url = "https://registry.yarnpkg.com/regexpp/-/regexpp-3.1.0.tgz"; - sha1 = "206d0ad0a5648cffbdb8ae46438f3dc51c9f78e2"; + name = "regexpp___regexpp_3.2.0.tgz"; + url = "https://registry.yarnpkg.com/regexpp/-/regexpp-3.2.0.tgz"; + sha1 = "0425a2768d8f23bad70ca4b90461fa2f1213e1b2"; }; } { @@ -4241,38 +4209,6 @@ sha1 = "5302f8169031735226544092e64981f751750383"; }; } - { - name = "spdx_correct___spdx_correct_3.1.1.tgz"; - path = fetchurl { - name = "spdx_correct___spdx_correct_3.1.1.tgz"; - url = "https://registry.yarnpkg.com/spdx-correct/-/spdx-correct-3.1.1.tgz"; - sha1 = "dece81ac9c1e6713e5f7d1b6f17d468fa53d89a9"; - }; - } - { - name = "spdx_exceptions___spdx_exceptions_2.3.0.tgz"; - path = fetchurl { - name = "spdx_exceptions___spdx_exceptions_2.3.0.tgz"; - url = "https://registry.yarnpkg.com/spdx-exceptions/-/spdx-exceptions-2.3.0.tgz"; - sha1 = "3f28ce1a77a00372683eade4a433183527a2163d"; - }; - } - { - name = "spdx_expression_parse___spdx_expression_parse_3.0.1.tgz"; - path = fetchurl { - name = "spdx_expression_parse___spdx_expression_parse_3.0.1.tgz"; - url = "https://registry.yarnpkg.com/spdx-expression-parse/-/spdx-expression-parse-3.0.1.tgz"; - sha1 = "cf70f50482eefdc98e3ce0a6833e4a53ceeba679"; - }; - } - { - name = "spdx_license_ids___spdx_license_ids_3.0.9.tgz"; - path = fetchurl { - name = "spdx_license_ids___spdx_license_ids_3.0.9.tgz"; - url = "https://registry.yarnpkg.com/spdx-license-ids/-/spdx-license-ids-3.0.9.tgz"; - sha1 = "8a595135def9592bda69709474f1cbeea7c2467f"; - }; - } { name = "sprintf_js___sprintf_js_1.1.2.tgz"; path = fetchurl { @@ -4505,14 +4441,6 @@ sha1 = "7f5ee823ae805207c00af2df4a84ec3fcfa570b4"; }; } - { - name = "textextensions___textextensions_5.12.0.tgz"; - path = fetchurl { - name = "textextensions___textextensions_5.12.0.tgz"; - url = "https://registry.yarnpkg.com/textextensions/-/textextensions-5.12.0.tgz"; - sha1 = "b908120b5c1bd4bb9eba41423d75b176011ab68a"; - }; - } { name = "throat___throat_6.0.1.tgz"; path = fetchurl { @@ -4522,19 +4450,35 @@ }; } { - name = "tldts_core___tldts_core_5.7.37.tgz"; + name = "tldts_core___tldts_core_5.7.38.tgz"; path = fetchurl { - name = "tldts_core___tldts_core_5.7.37.tgz"; - url = "https://registry.yarnpkg.com/tldts-core/-/tldts-core-5.7.37.tgz"; - sha1 = "29f34676d2de7dfaae6b13ee8d5cd3c5a6ce6396"; + name = "tldts_core___tldts_core_5.7.38.tgz"; + url = "https://registry.yarnpkg.com/tldts-core/-/tldts-core-5.7.38.tgz"; + sha1 = "779092c90941803fb682c3d7094a88f12aad4508"; }; } { - name = "tldts_experimental___tldts_experimental_5.7.37.tgz"; + name = "tldts_experimental___tldts_experimental_5.7.38.tgz"; path = fetchurl { - name = "tldts_experimental___tldts_experimental_5.7.37.tgz"; - url = "https://registry.yarnpkg.com/tldts-experimental/-/tldts-experimental-5.7.37.tgz"; - sha1 = "ead49d7dea3b08341ef17c9a03e23717c006407e"; + name = "tldts_experimental___tldts_experimental_5.7.38.tgz"; + url = "https://registry.yarnpkg.com/tldts-experimental/-/tldts-experimental-5.7.38.tgz"; + sha1 = "a2b03ae0282ee7439b1ed1618a1d7d2e9e66be78"; + }; + } + { + name = "tmp_promise___tmp_promise_3.0.2.tgz"; + path = fetchurl { + name = "tmp_promise___tmp_promise_3.0.2.tgz"; + url = "https://registry.yarnpkg.com/tmp-promise/-/tmp-promise-3.0.2.tgz"; + sha1 = "6e933782abff8b00c3119d63589ca1fb9caaa62a"; + }; + } + { + name = "tmp___tmp_0.2.1.tgz"; + path = fetchurl { + name = "tmp___tmp_0.2.1.tgz"; + url = "https://registry.yarnpkg.com/tmp/-/tmp-0.2.1.tgz"; + sha1 = "8457fc3037dcf4719c251367a1af6500ee1ccf14"; }; } { @@ -4649,14 +4593,6 @@ sha1 = "d260a24b0198436e133fa26a524a6d65fa3b2e37"; }; } - { - name = "type_fest___type_fest_0.8.1.tgz"; - path = fetchurl { - name = "type_fest___type_fest_0.8.1.tgz"; - url = "https://registry.yarnpkg.com/type-fest/-/type-fest-0.8.1.tgz"; - sha1 = "09e249ebde851d3b1e48d27c105444667f17b83d"; - }; - } { name = "typedarray_to_buffer___typedarray_to_buffer_3.1.5.tgz"; path = fetchurl { @@ -4753,14 +4689,6 @@ sha1 = "30898d1a7fa0c84d225a2c1434fb958f290883c1"; }; } - { - name = "validate_npm_package_license___validate_npm_package_license_3.0.4.tgz"; - path = fetchurl { - name = "validate_npm_package_license___validate_npm_package_license_3.0.4.tgz"; - url = "https://registry.yarnpkg.com/validate-npm-package-license/-/validate-npm-package-license-3.0.4.tgz"; - sha1 = "fc91f6b9c7ba15c857f4cb2c5defeec39d4f410a"; - }; - } { name = "verror___verror_1.10.0.tgz"; path = fetchurl { @@ -4769,22 +4697,6 @@ sha1 = "3a105ca17053af55d6e270c1f8288682e18da400"; }; } - { - name = "version_compare___version_compare_1.1.0.tgz"; - path = fetchurl { - name = "version_compare___version_compare_1.1.0.tgz"; - url = "https://registry.yarnpkg.com/version-compare/-/version-compare-1.1.0.tgz"; - sha1 = "7b3e67e7e6cec5c72d9c9e586f8854e419ade17c"; - }; - } - { - name = "version_range___version_range_1.1.0.tgz"; - path = fetchurl { - name = "version_range___version_range_1.1.0.tgz"; - url = "https://registry.yarnpkg.com/version-range/-/version-range-1.1.0.tgz"; - sha1 = "1c233064202ee742afc9d56e21da3b2e15260acf"; - }; - } { name = "w3c_hr_time___w3c_hr_time_1.0.2.tgz"; path = fetchurl { @@ -4842,11 +4754,11 @@ }; } { - name = "whatwg_url___whatwg_url_8.5.0.tgz"; + name = "whatwg_url___whatwg_url_8.6.0.tgz"; path = fetchurl { - name = "whatwg_url___whatwg_url_8.5.0.tgz"; - url = "https://registry.yarnpkg.com/whatwg-url/-/whatwg-url-8.5.0.tgz"; - sha1 = "7752b8464fc0903fec89aa9846fc9efe07351fd3"; + name = "whatwg_url___whatwg_url_8.6.0.tgz"; + url = "https://registry.yarnpkg.com/whatwg-url/-/whatwg-url-8.6.0.tgz"; + sha1 = "27c0205a4902084b872aecb97cf0f2a7a3011f4c"; }; } { @@ -4898,11 +4810,11 @@ }; } { - name = "ws___ws_7.4.6.tgz"; + name = "ws___ws_7.5.0.tgz"; path = fetchurl { - name = "ws___ws_7.4.6.tgz"; - url = "https://registry.yarnpkg.com/ws/-/ws-7.4.6.tgz"; - sha1 = "5654ca8ecdeee47c33a9a4bf6d28e2be2980377c"; + name = "ws___ws_7.5.0.tgz"; + url = "https://registry.yarnpkg.com/ws/-/ws-7.5.0.tgz"; + sha1 = "0033bafea031fb9df041b2026fc72a571ca44691"; }; } { @@ -4970,11 +4882,11 @@ }; } { - name = "yargs_parser___yargs_parser_20.2.7.tgz"; + name = "yargs_parser___yargs_parser_20.2.9.tgz"; path = fetchurl { - name = "yargs_parser___yargs_parser_20.2.7.tgz"; - url = "https://registry.yarnpkg.com/yargs-parser/-/yargs-parser-20.2.7.tgz"; - sha1 = "61df85c113edfb5a7a4e36eb8aa60ef423cbc90a"; + name = "yargs_parser___yargs_parser_20.2.9.tgz"; + url = "https://registry.yarnpkg.com/yargs-parser/-/yargs-parser-20.2.9.tgz"; + sha1 = "2eb7dc3b0289718fc295f362753845c41a0c94ee"; }; } { @@ -4985,6 +4897,14 @@ sha1 = "1c82bf0f6b6a66eafce7ef30e376f49a12477f66"; }; } + { + name = "yargs___yargs_17.0.1.tgz"; + path = fetchurl { + name = "yargs___yargs_17.0.1.tgz"; + url = "https://registry.yarnpkg.com/yargs/-/yargs-17.0.1.tgz"; + sha1 = "6a1ced4ed5ee0b388010ba9fd67af83b9362e0bb"; + }; + } { name = "yauzl___yauzl_2.10.0.tgz"; path = fetchurl { diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/vivaldi/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/vivaldi/default.nix index dabe0fd373..dba21d2f21 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/vivaldi/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/vivaldi/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, zlib, libX11, libXext, libSM, libICE, libxkbcommon, libxshmfence , libXfixes, libXt, libXi, libXcursor, libXScrnSaver, libXcomposite, libXdamage, libXtst, libXrandr -, alsaLib, dbus, cups, libexif, ffmpeg, systemd +, alsa-lib, dbus, cups, libexif, ffmpeg, systemd , freetype, fontconfig, libXft, libXrender, libxcb, expat , libuuid , libxml2 @@ -18,11 +18,11 @@ let vivaldiName = if isSnapshot then "vivaldi-snapshot" else "vivaldi"; in stdenv.mkDerivation rec { pname = "vivaldi"; - version = "3.8.2259.37-1"; + version = "4.0.2312.24-1"; src = fetchurl { url = "https://downloads.vivaldi.com/${branch}/vivaldi-${branch}_${version}_amd64.deb"; - sha256 = "1lpia3jm6l2yvbhrw5khws28n653w22bszzd44y6zv6zwbw7y127"; + sha256 = "0cyvnabjhcn1bm5py4nhfb1yhpz5nm9qm39vb4y1fwhjd0jv38hi"; }; unpackPhase = '' @@ -35,7 +35,7 @@ in stdenv.mkDerivation rec { buildInputs = [ stdenv.cc.cc stdenv.cc.libc zlib libX11 libXt libXext libSM libICE libxcb libxkbcommon libxshmfence libXi libXft libXcursor libXfixes libXScrnSaver libXcomposite libXdamage libXtst libXrandr - atk at-spi2-atk at-spi2-core alsaLib dbus cups gtk3 gdk-pixbuf libexif ffmpeg systemd + atk at-spi2-atk at-spi2-core alsa-lib dbus cups gtk3 gdk-pixbuf libexif ffmpeg systemd freetype fontconfig libXrender libuuid expat glib nss nspr libxml2 pango cairo gnome2.GConf libdrm mesa diff --git a/third_party/nixpkgs/pkgs/applications/networking/browsers/webbrowser/default.nix b/third_party/nixpkgs/pkgs/applications/networking/browsers/webbrowser/default.nix index 327fc5f31e..f9be7e9ec9 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/browsers/webbrowser/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/browsers/webbrowser/default.nix @@ -5,7 +5,7 @@ # Runtime , xorg, zip, freetype, fontconfig, glibc, libffi -, dbus, dbus-glib, gtk2, alsaLib, jack2, ffmpeg +, dbus, dbus-glib, gtk2, alsa-lib, jack2, ffmpeg }: let @@ -45,7 +45,7 @@ in stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib dbus dbus-glib ffmpeg fontconfig freetype yasm zip jack2 gtk2 + alsa-lib dbus dbus-glib ffmpeg fontconfig freetype yasm zip jack2 gtk2 gnome2.GConf xorg.libXt ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cloudflared/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cloudflared/default.nix index 153f0a9cb9..ed4ffffe45 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cloudflared/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cloudflared/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "cloudflared"; - version = "2021.5.10"; + version = "2021.6.0"; src = fetchFromGitHub { owner = "cloudflare"; repo = "cloudflared"; rev = version; - sha256 = "sha256-v/ehqaI3TPhHACtxU8PRB9tGp8qrl6AN6buxOhJdevI="; + sha256 = "sha256-cX0kdBPDgwjHphxGWrnXohHPp1nzs4SnvCry4AxMtp0="; }; vendorSha256 = null; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/argocd/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/argocd/default.nix index 05ba4187ce..0dfb550728 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/argocd/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/argocd/default.nix @@ -2,18 +2,18 @@ buildGoModule rec { pname = "argocd"; - version = "2.0.1"; - commit = "33eaf11e3abd8c761c726e815cbb4b6af7dcb030"; + version = "2.0.4"; + commit = "0842d448107eb1397b251e63ec4d4bc1b4efdd6e"; tag = "v${version}"; src = fetchFromGitHub { owner = "argoproj"; repo = "argo-cd"; rev = tag; - sha256 = "sha256-j/RdiMeaYxlmEvo5CKrGvkp25MrFsSYh+XNYWNcs0PE="; + sha256 = "sha256-SKSAJtp20f6A+CvrsBEmbcNJAKI5b4Wm4K0cr/lGo64="; }; - vendorSha256 = "sha256-8j5v99wOHM/SndJwpmGWiCFEyw4K513HEEbkPrD8C90="; + vendorSha256 = "sha256-RbEqivzTpXVQp4zl0zZWAh6qCr2KZSJ6Bj2pZaClQaQ="; nativeBuildInputs = [ packr makeWrapper installShellFiles ]; @@ -66,8 +66,9 @@ buildGoModule rec { ''; meta = with lib; { - description = "Argo CD is a declarative, GitOps continuous delivery tool for Kubernetes"; - homepage = "https://github.com/argoproj/argo"; + description = "Declarative continuous deployment for Kubernetes"; + downloadPage = "https://github.com/argoproj/argo-cd"; + homepage = "https://argoproj.github.io/projects/argo-cd"; license = licenses.asl20; maintainers = with maintainers; [ shahrukh330 superherointj ]; }; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/bosh-cli/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/bosh-cli/default.nix new file mode 100644 index 0000000000..2354a41a6a --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/bosh-cli/default.nix @@ -0,0 +1,43 @@ +{ lib +, fetchFromGitHub +, buildGoModule +, makeWrapper +, openssh +}: + +buildGoModule rec { + pname = "bosh-cli"; + + version = "6.4.4"; + + src = fetchFromGitHub { + owner = "cloudfoundry"; + repo = pname; + rev = "v${version}"; + sha256 = "sha256-N7GrxePNewxhHnkQP/XBdUIEL5FsFD4avouZaIO+BKc="; + }; + vendorSha256 = null; + + postPatch = '' + substituteInPlace cmd/version.go --replace '[DEV BUILD]' '${version}' + ''; + + nativeBuildInputs = [ makeWrapper ]; + + subPackages = [ "." ]; + + doCheck = false; + + postInstall = '' + mv $out/bin/bosh-cli $out/bin/bosh + wrapProgram $out/bin/bosh --prefix PATH : '${lib.makeBinPath [ openssh ]}' + ''; + + meta = with lib; { + description = "A command line interface to CloudFoundry BOSH"; + homepage = "https://bosh.io"; + changelog = "https://github.com/cloudfoundry/bosh-cli/releases/tag/v${version}"; + license = licenses.asl20; + maintainers = with maintainers; [ ris ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/fluxcd/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/fluxcd/default.nix index d7cf0a933d..22dc5472a1 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/fluxcd/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/fluxcd/default.nix @@ -1,11 +1,11 @@ { lib, buildGoModule, fetchFromGitHub, fetchzip, installShellFiles }: let - version = "0.13.4"; + version = "0.15.3"; manifests = fetchzip { url = "https://github.com/fluxcd/flux2/releases/download/v${version}/manifests.tar.gz"; - sha256 = "sha256-+2JvJFzH1CjU/WQ7MLtqd5Adfi/ktX9lPq4IyxPcUD8="; + sha256 = "sha256-/uD0hxtTJSr+2tZcwzOIQcEbikHOshWukEBSaK3FiP4="; stripRoot = false; }; in @@ -19,10 +19,10 @@ buildGoModule rec { owner = "fluxcd"; repo = "flux2"; rev = "v${version}"; - sha256 = "sha256-edyqxVl8oIwKp/eqFIbu+qn9zhYEnKJKwUbYZ7uxx0I="; + sha256 = "sha256-Pyt5BaOawBwyBz7ULzOZr0Fc6bqM5dKn775AylUjDVE="; }; - vendorSha256 = "sha256-keIzuqaLppu6+XK3MFiU0en+SVxWVLpfkKEKOAVOz7k="; + vendorSha256 = "sha256-17Kbun6Mrip4/XHN5eMHxgnSoX1KuGHwtb8yLTf/Mks="; nativeBuildInputs = [ installShellFiles ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/fn-cli/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/fn-cli/default.nix index 118e3e0fbe..8620c43cdb 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/fn-cli/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/fn-cli/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "fn"; - version = "0.6.6"; + version = "0.6.7"; src = fetchFromGitHub { owner = "fnproject"; repo = "cli"; rev = version; - sha256 = "12s3xgrr11n8kfwsh8xpwcza1pr6b200dmc9h8igjy3s3cgg6sh7"; + sha256 = "sha256-50tPR+x3U4XJB6lthEiZjOy2pD8LprSE41ZpH2Px8JY="; }; vendorSha256 = null; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/helm/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/helm/default.nix index e861ef97be..6eb80edb99 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/helm/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/helm/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "helm"; - version = "3.6.0"; + version = "3.6.1"; src = fetchFromGitHub { owner = "helm"; repo = "helm"; rev = "v${version}"; - sha256 = "sha256-sVa7d69MuOjH1IhUMcXu79kEE0BKylLYx6yrOV/DExY="; + sha256 = "sha256-MXMgCqdFNRMJaStoFMx8BO8OI1B7FqSETk0zW6a/vbE="; }; vendorSha256 = "sha256-PTAyRG6PZK+vaiheUd3oiu4iBGlnFjoCrci0CYbXjBk="; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/helmfile/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/helmfile/default.nix index 6dacc00830..7fda9c74c9 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/helmfile/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/helmfile/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "helmfile"; - version = "0.139.7"; + version = "0.139.9"; src = fetchFromGitHub { owner = "roboll"; repo = "helmfile"; rev = "v${version}"; - sha256 = "sha256-mxnl5ALave2E61AqJAHlLHDLHOwA2wwjs3sb4WnG82A="; + sha256 = "sha256-MHvfDeN4r9jwnXANHTpMEQUIoAZ+uXAmDtl8wdcpjHI="; }; - vendorSha256 = "sha256-tdsQx2AvbRC8l7YZFBg2xVqo0CLrOOwA9Nmuei+1ozw="; + vendorSha256 = "sha256-QYI5HxEUNrZKSjk0LlbhjvxXlWCbbLup51Ht3HJDNC8="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/k9s/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/k9s/default.nix index 8d515528a0..ad71906184 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/k9s/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/k9s/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "k9s"; - version = "0.24.8"; + version = "0.24.10"; src = fetchFromGitHub { owner = "derailed"; repo = "k9s"; rev = "v${version}"; - sha256 = "sha256-6RGm2uiYvsdpWdhNwDTw4z1O6uNErkWTuyOiwKIvXOY="; + sha256 = "sha256-ImWIR112q59hyKHXBmb9W6eVvu4xr+U4+uh2ZGcXv1g="; }; buildFlagsArray = '' @@ -18,7 +18,7 @@ buildGoModule rec { -X github.com/derailed/k9s/cmd.commit=${src.rev} ''; - vendorSha256 = "sha256-lzxGTubm+qQes5QKaamfmSkXs4qquHHjIhts8YmKlYI="; + vendorSha256 = "sha256-EEN3nKQBtAGG7MAa9h11KFPZ9g7xtNxhFB1i/2QS66g="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/kube3d/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/kube3d/default.nix index 88ba44b2e2..a7a1737c14 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/kube3d/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/kube3d/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "kube3d"; - version = "4.4.4"; + version = "4.4.6"; src = fetchFromGitHub { owner = "rancher"; repo = "k3d"; rev = "v${version}"; - sha256 = "sha256-pfyU25MASKQMwd49IbNyyEiz3gmSOBmLdWtIKhYU2wg="; + sha256 = "sha256-gId7zDrtkTjFN59yaFyeYwrDZV24hkkV+4dPr8Jr22E="; }; vendorSha256 = null; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/kubebuilder/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/kubebuilder/default.nix new file mode 100644 index 0000000000..d123790edd --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/kubebuilder/default.nix @@ -0,0 +1,49 @@ +{ lib +, buildGoModule +, fetchFromGitHub +, installShellFiles +, makeWrapper +, git +, go +}: + +buildGoModule rec { + pname = "kubebuilder"; + version = "3.1.0"; + + src = fetchFromGitHub { + owner = "kubernetes-sigs"; + repo = "kubebuilder"; + rev = "v${version}"; + sha256 = "1726j2b5jyvllvnk60g6px3g2jyyphd9pc4vgid45mis9b60sh8a"; + }; + vendorSha256 = "0zxyd950ksjswja64rfri5v2yaalfg6qmq8215ildgrcavl9974n"; + + subPackages = ["cmd" "pkg/..."]; + + preBuild = '' + export buildFlagsArray+=("-ldflags=-X main.kubeBuilderVersion=v${version} \ + -X main.goos=$GOOS \ + -X main.goarch=$GOARCH \ + -X main.gitCommit=v${version} \ + -X main.buildDate=v${version}") + ''; + + doCheck = true; + + postInstall = '' + mv $out/bin/cmd $out/bin/kubebuilder + wrapProgram $out/bin/kubebuilder \ + --prefix PATH : ${lib.makeBinPath [ go ]} + ''; + + allowGoReference = true; + nativeBuildInputs = [ makeWrapper git ]; + + meta = with lib; { + homepage = "https://github.com/kubernetes-sigs/kubebuilder"; + description = "SDK for building Kubernetes APIs using CRDs"; + license = licenses.asl20; + maintainers = with maintainers; [ cmars ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/kubectl-example/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/kubectl-example/default.nix index 04677cb427..228f12075c 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/kubectl-example/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/kubectl-example/default.nix @@ -11,7 +11,7 @@ buildGoModule rec { sha256 = "18vp53cda93qjssxygwqp55yc80a93781839gf3138awngf731yq"; }; - vendorSha256 = "0sjjj9z1dhilhpc8pq4154czrb79z9cm044jvn75kxcjv6v5l2m5"; + vendorSha256 = null; meta = with lib; { description = "kubectl plugin for retrieving resource example YAMLs"; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/kubelogin-oidc/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/kubelogin-oidc/default.nix index fa893f3fa7..e552113310 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/kubelogin-oidc/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/kubelogin-oidc/default.nix @@ -2,18 +2,18 @@ buildGoModule rec { pname = "kubelogin"; - version = "1.23.2"; + version = "1.23.3"; src = fetchFromGitHub { owner = "int128"; repo = pname; rev = "v${version}"; - sha256 = "sha256-Vj7qk1x4d94GgthmHhWbQvsfnZE1UL3Bdk5zjAb3vWs="; + sha256 = "sha256-qhdt/j1yFlCr+CCM3VQHxRVMEelZDsjhDJW9CYNCx2U="; }; subPackages = ["."]; - vendorSha256 = "sha256-JsBseRIbStsX44rLsGAERFUSWUuLcNycRDAcOMconnE="; + vendorSha256 = "sha256-RxIrnwIHDi9umu9bqpz3lnpNFdIWoTP657Te9iBv4IA="; # Rename the binary instead of symlinking to avoid conflict with the # Azure version of kubelogin diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/kubeone/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/kubeone/default.nix index 4876233cd2..b570ebc09d 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/kubeone/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/kubeone/default.nix @@ -6,16 +6,16 @@ buildGoModule rec { pname = "kubeone"; - version = "1.2.1"; + version = "1.2.3"; src = fetchFromGitHub { owner = "kubermatic"; repo = "kubeone"; rev = "v${version}"; - sha256 = "1abm7735c4pjv31pfggkvia7br19zbhjpp2w0n5zckwrjm9hxns6"; + sha256 = "sha256-oInE8fwE+7a+F4NevKPuYQqCP9GkPhqayLu8HCmVbLs="; }; - vendorSha256 = "01rl4sd9prfw4ivx7dwrr9irjr0xryihp4fzpcjd2zg8f1ibkwsn"; + vendorSha256 = "sha256-VvO5YnDofdEku9+RC6PPHWSZY8qZt9N3JNzlm5omNAc="; nativeBuildInputs = [ installShellFiles diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/kubernetes/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/kubernetes/default.nix index 60d5dec48a..2dfbac5c5a 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/kubernetes/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/kubernetes/default.nix @@ -20,13 +20,13 @@ stdenv.mkDerivation rec { pname = "kubernetes"; - version = "1.21.1"; + version = "1.21.2"; src = fetchFromGitHub { owner = "kubernetes"; repo = "kubernetes"; rev = "v${version}"; - sha256 = "sha256-gJjCw28SqU49kIiRH+MZgeYN4VBgKVEaRPr5A/2c5Pc="; + sha256 = "sha256-GAX8ODjGj5LM44KgJC0N5uuOH4z33lDWoQgImOl8/xo="; }; nativeBuildInputs = [ removeReferencesTo makeWrapper which go rsync installShellFiles ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/linkerd/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/linkerd/default.nix index 0dd6363d07..31fae0e31c 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/linkerd/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/linkerd/default.nix @@ -1,27 +1,71 @@ -{ lib, fetchFromGitHub, buildGoModule }: +{ lib, fetchFromGitHub, buildGoModule, installShellFiles }: -buildGoModule { - pname = "linkerd-unstable"; - version = "2020-05-01"; +let generic = { channel, version, sha256, vendorSha256 }: + buildGoModule rec { + pname = "linkerd-${channel}"; + inherit version vendorSha256; - src = fetchFromGitHub { - owner = "linkerd"; - repo = "linkerd2"; - rev = "9e9f3bb1e2aeab8cf20f98f5cad159bbb6f24883"; - sha256 = "1pvj31wz1klwhcqga1m8kixdqsxwmppp9ix6r3wpp4dwfig45fm0"; + src = fetchFromGitHub { + owner = "linkerd"; + repo = "linkerd2"; + rev = "${channel}-${version}"; + inherit sha256; + }; + + subPackages = [ "cli" ]; + runVend = true; + + preBuild = '' + env GOFLAGS="" go generate ./pkg/charts/static + env GOFLAGS="" go generate ./jaeger/static + env GOFLAGS="" go generate ./multicluster/static + env GOFLAGS="" go generate ./viz/static + ''; + + buildFlagsArray = [ + "-tags=prod" + ]; + + ldflags = [ + "-s" "-w" + "-X github.com/linkerd/linkerd2/pkg/version.Version=${src.rev}" + ]; + + nativeBuildInputs = [ installShellFiles ]; + + postInstall = '' + mv $out/bin/cli $out/bin/linkerd + installShellCompletion --cmd linkerd \ + --bash <($out/bin/linkerd completion bash) \ + --zsh <($out/bin/linkerd completion zsh) \ + --fish <($out/bin/linkerd completion fish) + ''; + + doInstallCheck = true; + installCheckPhase = '' + $out/bin/linkerd version --client | grep ${src.rev} > /dev/null + ''; + + meta = with lib; { + description = "A simple Kubernetes service mesh that improves security, observability and reliability"; + downloadPage = "https://github.com/linkerd/linkerd2/"; + homepage = "https://linkerd.io/"; + license = licenses.asl20; + maintainers = with maintainers; [ Gonzih bryanasdev000 superherointj ]; + }; }; - - vendorSha256 = "0vls58ld50jca5yn73kvg3lx4z83cc7skky54a90pkbj737y58pz"; - - doCheck = false; - - subPackages = [ "cli/cmd" ]; - - meta = with lib; { - description = "A service mesh for Kubernetes and beyond"; - homepage = "https://linkerd.io/"; - license = licenses.asl20; - maintainers = with maintainers; [ Gonzih ]; - broken = true; - }; -} +in + { + stable = generic { + channel = "stable"; + version = "2.10.2"; + sha256 = "sha256-dOD0S4FJ2lXE+1VZooi8tKvC8ndGEHAxmAvSqoWI/m0="; + vendorSha256 = "sha256-Qb0FZOvKL9GgncfUl538PynkYbm3V8Q6lUpApUoIp5s="; + }; + edge = generic { + channel = "edge"; + version = "21.6.3"; + sha256 = "sha256-NgfbkeVRl0AGNkZSS2nSAHp4eZ49QNSEYMuFe1G5iBY="; + vendorSha256 = "sha256-rq/MHo5MG2EKZ3d937TIDXFCoWnLlQO3C/fo1bhRxCA="; + }; + } diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/nomad/1.0.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/nomad/1.0.nix index 9e7341e55b..ac6938e4dd 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/nomad/1.0.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/nomad/1.0.nix @@ -6,6 +6,6 @@ callPackage ./generic.nix { inherit buildGoPackage nvidia_x11 nvidiaGpuSupport; - version = "1.0.6"; - sha256 = "1nzaw4014bndxv042dkxdj492b21r5v5f06vav2kr1azk4m9sf07"; + version = "1.0.8"; + sha256 = "1kjwa9lnxh5zfzijqgkp94wslkzn6kspwi42kf46vrn0qkiz39f2"; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/nomad/1.1.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/nomad/1.1.nix index 9e2966856e..cfc38c2f59 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/nomad/1.1.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/nomad/1.1.nix @@ -6,6 +6,6 @@ callPackage ./generic.nix { inherit buildGoPackage nvidia_x11 nvidiaGpuSupport; - version = "1.1.0"; - sha256 = "0sz6blyxyxi5iq170s9v4nndb1hpz603z5ps2cxkdkaafal39767"; + version = "1.1.2"; + sha256 = "08ynfr2lqzv66ymj37qbc72lf2iq41kf94n76pdvynymk4dq98nq"; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/default.nix index d032577ce1..dcdf134b26 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { pname = "octant"; - version = "0.20.0"; + version = "0.21.0"; src = let @@ -19,10 +19,10 @@ stdenv.mkDerivation rec { }; in fetchsrc version { - x86_64-linux = "sha256-VFlZP5d6/YhzVIhveqMc4HfapBt0K/XjtqjCQNc514A="; - aarch64-linux = "sha256-RfdMfimmoHG4ixBtUVJ/V+mDhQ9aD+yeohkeUMUP8Zg="; - x86_64-darwin = "sha256-2Qgl3RdA4mMRTqR7o3Q86Zip5wtgvFp1vZn689FUtSI="; - aarch64-darwin = "sha256-+eZVg+B5YYf+XnDhNd6OU4+yFM9GtyiavcAr/EXh7XE="; + x86_64-linux = "sha256-Ben2wAquHADWBv1MEfPWxs96pLz1bK2F6bLoYVTSkng="; + aarch64-linux = "sha256-1kK0Gu4cQYk+QDJJJiiDan4SnP3Xjr8nLOBtv26UDV4="; + x86_64-darwin = "sha256-gOkHpUTWKrikKYZmkfgck3Lf3g5Pakcn0i2A9Hd07UE="; + aarch64-darwin = "sha256-Xpl8odVXw4WzF7CEZ+Bbxa6oQDBv9VMzHCNOjIcFGzE="; }; dontConfigure = true; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/desktop.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/desktop.nix index 8bc7683475..4095a7907e 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/desktop.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/desktop.nix @@ -2,7 +2,7 @@ let pname = "octant-desktop"; - version = "0.20.0"; + version = "0.21.0"; name = "${pname}-${version}"; inherit (stdenv.hostPlatform) system; @@ -15,8 +15,8 @@ let src = fetchurl { url = "https://github.com/vmware-tanzu/octant/releases/download/v${version}/Octant-${version}.${suffix}"; sha256 = { - x86_64-linux = "sha256-mPD5qa/IYsakjcoPnWVpkmhgkhnRK0qTGQ6hanzDt/Y="; - x86_64-darwin = "sha256-nxpwBRUeLSPqNEFjF8hKzRhA2ahqh/KyAitnSxYdyJ8="; + x86_64-linux = "sha256-Woridi8uGsxvccdeaDzVLs+2YrRKUnm3WbX5LhorM1Y="; + x86_64-darwin = "sha256-NF3bm8WFEs4kgrUp+7qCbj6Z6pUMRUp7h4nhJQDJnoY="; }.${system}; }; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/update.sh b/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/update.sh index 6c34fc4b37..3e2b56b7a6 100755 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/update.sh +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/octant/update.sh @@ -30,9 +30,11 @@ OCTANT_VER=$(curl -Ls -w "%{url_effective}" -o /dev/null https://github.com/vmwa OCTANT_LINUX_X64_SHA256=$(fetch_arch "$OCTANT_VER" "Linux-64bit") OCTANT_LINUX_AARCH64_SHA256=$(fetch_arch "$OCTANT_VER" "Linux-arm64") OCTANT_DARWIN_X64_SHA256=$(fetch_arch "$OCTANT_VER" "macOS-64bit") +OCTANT_DARWIN_AARCH64_SHA256=$(fetch_arch "$OCTANT_VER" "macOS-arm64") sed -i "s/version = \".*\"/version = \"$OCTANT_VER\"/" "$NIX_DRV" replace_sha "x86_64-linux" "$OCTANT_LINUX_X64_SHA256" replace_sha "aarch64-linux" "$OCTANT_LINUX_AARCH64_SHA256" replace_sha "x86_64-darwin" "$OCTANT_DARWIN_X64_SHA256" +replace_sha "aarch64-darwin" "$OCTANT_DARWIN_AARCH64_SHA256" diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/tanka/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/tanka/default.nix index 715f75ddc8..c792a38001 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/tanka/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/tanka/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "tanka"; - version = "0.15.1"; + version = "0.16.0"; src = fetchFromGitHub { owner = "grafana"; repo = pname; rev = "v${version}"; - sha256 = "sha256-aCgr56nXZCkG8k/ZGH2/cDOaqkznnyb6JLEcImqLH64="; + sha256 = "sha256-KvQIVJZD/VvLE5RocWLRVGbb8faLY2cBeFSE/6E7x50="; }; vendorSha256 = "sha256-vpm2y/CxRNWkz6+AOMmmZH5AjRQWAa6WD5Fnx5lqJYw="; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/tektoncd-cli/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/tektoncd-cli/default.nix index 979216b3cc..03f02c55ad 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/tektoncd-cli/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/tektoncd-cli/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "tektoncd-cli"; - version = "0.18.0"; + version = "0.19.0"; src = fetchFromGitHub { owner = "tektoncd"; repo = "cli"; rev = "v${version}"; - sha256 = "sha256-vZxpfVMUl1EZwCuLlwmSKWrz86aTjWYlAIwO4b9ACqk="; + sha256 = "sha256-fWcHjpfbpj2lrJ0FawhQJuSxAEX1WwOY7m+CAgag4qk="; }; vendorSha256 = null; @@ -43,7 +43,8 @@ buildGoModule rec { installCheckPhase = '' runHook preInstallCheck $out/bin/tkn --help - $out/bin/tkn version | grep "Client version: ${version}" + # New tkn version functionality outputs empty https://github.com/tektoncd/cli/issues/1389 + # $out/bin/tkn version | grep "Client version: ${version}" runHook postInstallCheck ''; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform-docs/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform-docs/default.nix index 54520b54c8..bc04d28350 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform-docs/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform-docs/default.nix @@ -1,23 +1,19 @@ { lib, buildGoModule, fetchFromGitHub }: buildGoModule rec { pname = "terraform-docs"; - version = "0.13.0"; + version = "0.14.1"; src = fetchFromGitHub { owner = "terraform-docs"; repo = pname; rev = "v${version}"; - sha256 = "sha256-lx+yp0ybgZfmxvPM2BY2yq39qA6XebcKGrFd0AJa4yg="; + sha256 = "sha256-Jm0ySxn4GFW4iAH3tOIvclcDGJMKzH7m7fhWnAf4+gs="; }; - vendorSha256 = "sha256-qoZUgSSr7jsDVVPBUyfN5Uw4CnH9EnD/4tX+TCSNV0Q="; + vendorSha256 = "sha256-IzmAlthE6SVvGHj72wrY1/KLehOv8Ck9VaTv5jMpt48="; subPackages = [ "." ]; - preBuild = '' - buildFlagsArray+=("-ldflags" "-X main.version=${version}") - ''; - meta = with lib; { description = "A utility to generate documentation from Terraform modules in various output formats"; homepage = "https://github.com/terraform-docs/terraform-docs/"; diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform-providers/providers.json b/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform-providers/providers.json index 252b627270..03cceb4b86 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform-providers/providers.json +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform-providers/providers.json @@ -14,6 +14,15 @@ "sha256": "1wdrjpd3l0xadsa3lqhsc9c57g8x2qkwb76q824sk8za1a7lapii", "version": "1.5.0-patched" }, + "aiven": { + "owner": "aiven", + "provider-source-address": "registry.terraform.io/aiven/aiven", + "repo": "terraform-provider-aiven", + "rev": "v2.1.14", + "sha256": "14bfdhn3daygj1v3lm9b3791sx2cd5h0panchpp39h6vrccrpmmk", + "vendorSha256": "1j09bfbld03yxq0vv9ld0xmw5axbza2bwlz01i1gl1v9dprlnbkc", + "version": "2.1.14" + }, "akamai": { "owner": "terraform-providers", "provider-source-address": "registry.terraform.io/akamai/akamai", @@ -226,10 +235,11 @@ }, "ct": { "owner": "poseidon", + "provider-source-address": "registry.terraform.io/poseidon/ct", "repo": "terraform-provider-ct", - "rev": "v0.6.1", - "sha256": "0hh3hvi8lwb0h8x9viz5p991w94gn7354nw95b51rdmir9qi2x89", - "version": "0.6.1" + "rev": "v0.8.0", + "sha256": "1mm86q3rl81dm2yfg2hdf88x8g5mhwwixrxgrffpkjvjqy42a8h7", + "version": "0.8.0" }, "datadog": { "owner": "terraform-providers", @@ -378,11 +388,13 @@ "version": "3.47.0" }, "grafana": { - "owner": "terraform-providers", + "owner": "grafana", + "provider-source-address": "registry.terraform.io/grafana/grafana", "repo": "terraform-provider-grafana", - "rev": "v1.5.0", - "sha256": "0zy3bqgpxymp2zygaxzllk1ysdankwxa1sy1djfgr4fs2nlggkwi", - "version": "1.5.0" + "rev": "v1.12.0", + "sha256": "0jqm8ql8kams2rh90fwdmv9nnf4npzpxaagm9725nsf0iqn3qlhn", + "vendorSha256": "0pxd3sgpkry7gik6rgfl3cpgawhvgpb0sn1rkhdp9p11iwx7xxbi", + "version": "1.12.0" }, "gridscale": { "owner": "terraform-providers", @@ -501,10 +513,19 @@ "owner": "Mongey", "provider-source-address": "registry.terraform.io/Mongey/kafka", "repo": "terraform-provider-kafka", - "rev": "v0.2.12", - "sha256": "0jm592chliiph5643rymzpwnlcq7q6bpwg2h86x5qmbzbiyqsi83", - "vendorSha256": "08wg16g4mvn6kl8xwn89195a826cb132ijvrgf32c6p7zp4lgmjd", - "version": "0.2.12" + "rev": "v0.3.3", + "sha256": "10il2mmsrk27zgzdkwn495sfhlad2nnc2xa7qzn7rlqzh92bb8rb", + "vendorSha256": "1gxx561s7jghiq6kqb2nns52bbcp0ks2dylrb1lvy7g2798cpspf", + "version": "0.3.3" + }, + "kafka-connect": { + "owner": "Mongey", + "provider-source-address": "registry.terraform.io/Mongey/kafka-connect", + "repo": "terraform-provider-kafka-connect", + "rev": "v0.2.3", + "sha256": "0fn03l58lkrlinvnxld2ba7z1gx95vxklbhh2z7930pih0vhr0sr", + "vendorSha256": "17fwqhxh22szdys97dxh069z6s8xr3y9i3pi5ckdcr462j1dr95w", + "version": "0.2.3" }, "keycloak": { "owner": "mrparkers", @@ -609,6 +630,7 @@ }, "metal": { "owner": "equinix", + "provider-source-address": "registry.terraform.io/equinix/metal", "repo": "terraform-provider-metal", "rev": "v2.1.0", "sha256": "06i3rj6ig8hxbncdpa8b11v8pr3zhi90ppmf77jjin1114ikd172", @@ -1099,10 +1121,10 @@ "owner": "hashicorp", "provider-source-address": "registry.terraform.io/hashicorp/vsphere", "repo": "terraform-provider-vsphere", - "rev": "v1.24.3", - "sha256": "1sc60x3r4nb48p8yb7778fpk78acq808jzcd5ijnwxqakccml5kl", + "rev": "v2.0.1", + "sha256": "0ah3bi4zpg8j59v4bj9a8vyknpnyl1g8bx4qyfwwz4gnqp9m4anr", "vendorSha256": null, - "version": "1.24.3" + "version": "2.0.1" }, "vthunder": { "owner": "terraform-providers", diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform/default.nix index f2c11bc92c..691491ae7f 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/terraform/default.nix @@ -1,10 +1,21 @@ -{ stdenv, lib, buildGoModule, fetchFromGitHub, makeWrapper, coreutils -, runCommand, runtimeShell, writeText, terraform-providers, fetchpatch }: +{ stdenv +, lib +, buildGoModule +, fetchFromGitHub +, makeWrapper +, coreutils +, runCommand +, runtimeShell +, writeText +, terraform-providers +, fetchpatch +}: let generic = { version, sha256, vendorSha256 ? null, ... }@attrs: let attrs' = builtins.removeAttrs attrs [ "version" "sha256" "vendorSha256" ]; - in buildGoModule ({ + in + buildGoModule ({ name = "terraform-${version}"; inherit vendorSha256; @@ -62,33 +73,37 @@ let actualPlugins = plugins terraform.plugins; # Make providers available in Terraform 0.13 and 0.12 search paths. - pluginDir = lib.concatMapStrings (pl: let - inherit (pl) version GOOS GOARCH; + pluginDir = lib.concatMapStrings + (pl: + let + inherit (pl) version GOOS GOARCH; - pname = pl.pname or (throw "${pl.name} is missing a pname attribute"); + pname = pl.pname or (throw "${pl.name} is missing a pname attribute"); - # This is just the name, without the terraform-provider- prefix - plugin_name = lib.removePrefix "terraform-provider-" pname; + # This is just the name, without the terraform-provider- prefix + plugin_name = lib.removePrefix "terraform-provider-" pname; - slug = pl.passthru.provider-source-address or "registry.terraform.io/nixpkgs/${plugin_name}"; + slug = pl.passthru.provider-source-address or "registry.terraform.io/nixpkgs/${plugin_name}"; - shim = writeText "shim" '' - #!${runtimeShell} - exec ${pl}/bin/${pname}_v${version} "$@" - ''; - in '' - TF_0_13_PROVIDER_PATH=$out/plugins/${slug}/${version}/${GOOS}_${GOARCH}/${pname}_v${version} - mkdir -p "$(dirname $TF_0_13_PROVIDER_PATH)" + shim = writeText "shim" '' + #!${runtimeShell} + exec ${pl}/bin/${pname}_v${version} "$@" + ''; + in + '' + TF_0_13_PROVIDER_PATH=$out/plugins/${slug}/${version}/${GOOS}_${GOARCH}/${pname}_v${version} + mkdir -p "$(dirname $TF_0_13_PROVIDER_PATH)" - cp ${shim} "$TF_0_13_PROVIDER_PATH" - chmod +x "$TF_0_13_PROVIDER_PATH" + cp ${shim} "$TF_0_13_PROVIDER_PATH" + chmod +x "$TF_0_13_PROVIDER_PATH" - TF_0_12_PROVIDER_PATH=$out/plugins/${pname}_v${version} + TF_0_12_PROVIDER_PATH=$out/plugins/${pname}_v${version} - cp ${shim} "$TF_0_12_PROVIDER_PATH" - chmod +x "$TF_0_12_PROVIDER_PATH" - '' - ) actualPlugins; + cp ${shim} "$TF_0_12_PROVIDER_PATH" + chmod +x "$TF_0_12_PROVIDER_PATH" + '' + ) + actualPlugins; # Wrap PATH of plugins propagatedBuildInputs, plugins may have runtime dependencies on external binaries wrapperInputs = lib.unique (lib.flatten @@ -110,9 +125,10 @@ let }; # Don't bother wrapping unless we actually have plugins, since the wrapper will stop automatic downloading # of plugins, which might be counterintuitive if someone just wants a vanilla Terraform. - in if actualPlugins == [ ] then + in + if actualPlugins == [ ] then terraform.overrideAttrs - (orig: { passthru = orig.passthru // passthru; }) + (orig: { passthru = orig.passthru // passthru; }) else lib.appendToName "with-plugins" (stdenv.mkDerivation { inherit (terraform) name meta; @@ -127,68 +143,84 @@ let inherit passthru; }); - in withPlugins (_: [ ]); + in + withPlugins (_: [ ]); plugins = removeAttrs terraform-providers [ "override" "overrideDerivation" "recurseForDerivations" ]; -in rec { - terraform_0_12 = pluggable (generic { +in +rec { + # Constructor for other terraform versions + mkTerraform = attrs: pluggable (generic attrs); + + terraform_0_12 = mkTerraform { version = "0.12.31"; sha256 = "03p698xdbk5gj0f9v8v1fpd74zng3948dyy4f2hv7zgks9hid7fg"; patches = [ - ./provider-path.patch - (fetchpatch { - name = "fix-mac-mojave-crashes.patch"; - url = "https://github.com/hashicorp/terraform/commit/cd65b28da051174a13ac76e54b7bb95d3051255c.patch"; - sha256 = "1k70kk4hli72x8gza6fy3vpckdm3sf881w61fmssrah3hgmfmbrs"; - }) ]; + ./provider-path.patch + (fetchpatch { + name = "fix-mac-mojave-crashes.patch"; + url = "https://github.com/hashicorp/terraform/commit/cd65b28da051174a13ac76e54b7bb95d3051255c.patch"; + sha256 = "1k70kk4hli72x8gza6fy3vpckdm3sf881w61fmssrah3hgmfmbrs"; + }) + ]; passthru = { inherit plugins; }; - }); + }; - terraform_0_13 = pluggable (generic { + terraform_0_13 = mkTerraform { version = "0.13.7"; sha256 = "1cahnmp66dk21g7ga6454yfhaqrxff7hpwpdgc87cswyq823fgjn"; patches = [ ./provider-path.patch ]; passthru = { inherit plugins; }; - }); + }; - terraform_0_14 = pluggable (generic { + terraform_0_14 = mkTerraform { version = "0.14.11"; sha256 = "1yi1jj3n61g1kn8klw6l78shd23q79llb7qqwigqrx3ki2mp279j"; vendorSha256 = "1d93aqkjdrvabkvix6h1qaxpjzv7w1wa7xa44czdnjs2lapx4smm"; patches = [ ./provider-path.patch ]; passthru = { inherit plugins; }; - }); + }; - terraform_0_15 = pluggable (generic { + terraform_0_15 = mkTerraform { version = "0.15.5"; sha256 = "18f4a6l24s3cym7gk40agxikd90i56q84wziskw1spy9rgv2yx6d"; vendorSha256 = "12hrpxay6k3kz89ihyhl91c4lw4wp821ppa245w9977fq09fhnx0"; patches = [ ./provider-path-0_15.patch ]; passthru = { inherit plugins; }; - }); + }; + + terraform_1_0 = mkTerraform { + version = "1.0.1"; + sha256 = "0sy33wf2wjhybr5smmyla7ci61w8irk0nrv3vv7h87yli1dd9yj0"; + vendorSha256 = "0ai7h85f0xdlh7q04l4hb9m5wajyqbylhvpjanlhkzvc60silhmx"; + patches = [ ./provider-path-0_15.patch ]; + passthru = { inherit plugins; }; + }; # Tests that the plugins are being used. Terraform looks at the specific # file pattern and if the plugin is not found it will try to download it # from the Internet. With sandboxing enable this test will fail if that is # the case. - terraform_plugins_test = let - mainTf = writeText "main.tf" '' - resource "random_id" "test" {} - ''; - terraform = terraform_0_12.withPlugins (p: [ p.random ]); - test = - runCommand "terraform-plugin-test" { buildInputs = [ terraform ]; } '' - set -e - # make it fail outside of sandbox - export HTTP_PROXY=http://127.0.0.1:0 HTTPS_PROXY=https://127.0.0.1:0 - cp ${mainTf} main.tf - terraform init - touch $out + terraform_plugins_test = + let + mainTf = writeText "main.tf" '' + resource "random_id" "test" {} ''; - in test; + terraform = terraform_1_0.withPlugins (p: [ p.random ]); + test = + runCommand "terraform-plugin-test" { buildInputs = [ terraform ]; } '' + set -e + # make it fail outside of sandbox + export HTTP_PROXY=http://127.0.0.1:0 HTTPS_PROXY=https://127.0.0.1:0 + cp ${mainTf} main.tf + terraform init + touch $out + ''; + in + test; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/cluster/terragrunt/default.nix b/third_party/nixpkgs/pkgs/applications/networking/cluster/terragrunt/default.nix index f1e2390872..faf817d1c7 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/cluster/terragrunt/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/cluster/terragrunt/default.nix @@ -2,22 +2,20 @@ buildGoModule rec { pname = "terragrunt"; - version = "0.29.8"; + version = "0.30.7"; src = fetchFromGitHub { owner = "gruntwork-io"; repo = pname; rev = "v${version}"; - sha256 = "sha256-zHfY1pl9r9N1Jx9TzbOFYt2VR9hvHWcdFhPc36Q3apE="; + sha256 = "sha256-zcb2bdIvUeHEto2NeY0Zwj7jIB+ipVXpnb7q97IkvmA="; }; - vendorSha256 = "sha256-qlSCQtiGHmlk3DyETMoQbbSYhuUSZTsvAnBKuDJI8x8="; + vendorSha256 = "sha256-OgNNq1qRhCufcWemLxh50pzs432RxZpWWcyBB7xeiOs="; doCheck = false; - preBuild = '' - buildFlagsArray+=("-ldflags" "-s -w -X main.VERSION=v${version}") - ''; + ldflags = [ "-s" "-w" "-X main.VERSION=v${version}" ]; doInstallCheck = true; installCheckPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/networking/feedreaders/gnome-feeds/default.nix b/third_party/nixpkgs/pkgs/applications/networking/feedreaders/gnome-feeds/default.nix index a80d0aa28d..62ffe15e61 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/feedreaders/gnome-feeds/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/feedreaders/gnome-feeds/default.nix @@ -20,14 +20,14 @@ python3.pkgs.buildPythonApplication rec { pname = "gnome-feeds"; - version = "0.16.1"; + version = "0.16.2"; src = fetchFromGitLab { domain = "gitlab.gnome.org"; owner = "World"; repo = "gfeeds"; rev = version; - sha256 = "10hq06nx7lcm3dqq34qkxc6k6383mvjs7pxii9y9995d9kk5a49k"; + sha256 = "sha256-66dwVR9owg050aHCHJek7jYnT+/yyCKo4AaUE0hCqBA="; }; format = "other"; diff --git a/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsboat/default.nix b/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsboat/default.nix index 22fadca3cb..289f631ee8 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsboat/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsboat/default.nix @@ -3,16 +3,16 @@ rustPlatform.buildRustPackage rec { pname = "newsboat"; - version = "2.23"; + version = "2.24"; src = fetchFromGitHub { owner = "newsboat"; repo = "newsboat"; rev = "r${version}"; - sha256 = "0a0g9km515kipqmz6c09aj3lgy3nkzqwgnp87fh8f2vr098fn144"; + sha256 = "0qb10w7pn9hiczjjpc0xanmc83p22ngcqcrkjwji5rl0sh8v9ii4"; }; - cargoSha256 = "03g14npkisz159gibhfxj7l36vzm7cvg355hndzpxzvhf5r5yjqg"; + cargoSha256 = "0vhr8qyw4f3lc208mgl1m3z42igkbwly6wcv7g7jrq3c6dcwyhjn"; # TODO: Check if that's still needed postPatch = lib.optionalString stdenv.isDarwin '' diff --git a/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsflash/default.nix b/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsflash/default.nix index f93b8ed50b..24ec320cc4 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsflash/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsflash/default.nix @@ -15,32 +15,27 @@ , webkitgtk , glib-networking , librsvg +, xdg-utils , gst_all_1 }: stdenv.mkDerivation rec { pname = "newsflash"; - version = "1.4.1"; + version = "1.4.2"; src = fetchFromGitLab { owner = "news-flash"; repo = "news_flash_gtk"; rev = version; - hash = "sha256-pskmvztKOwutXRHVnW5u68/0DAuV9Gb+Ovp2JbXiMYo="; + hash = "sha256-8W158GrvVGu5b3TG5bomK+hAF6jttZuImkmtcZOl91o="; }; cargoDeps = rustPlatform.fetchCargoTarball { inherit src; name = "${pname}-${version}"; - hash = "sha256-qq8cZplt5YWUwsXUShMDhQm3RGH2kCEBk64x6bOa50E="; + hash = "sha256-zHtD3NVWYQ5njg17Z2YmEttiK2oiq01OiAXIZofIqKI="; }; - # https://github.com/CasualX/obfstr/blob/v0.2.4/build.rs#L5 - # obfstr 0.2.4 fails to set RUSTC_BOOTSTRAP in its build script because cargo - # build scripts are forbidden from setting RUSTC_BOOTSTRAP since rustc 1.52.0 - # https://github.com/rust-lang/rust/blob/1.52.0/RELEASES.md#compatibility-notes - RUSTC_BOOTSTRAP = 1; - patches = [ # Post install tries to generate an icon cache & update the # desktop database. The gtk setup hook drop-icon-theme-cache.sh @@ -83,6 +78,9 @@ stdenv.mkDerivation rec { # SVG support for gdk-pixbuf librsvg + + # Open links in browser + xdg-utils ] ++ (with gst_all_1; [ # Audio & video support for webkitgtk WebView gstreamer @@ -96,5 +94,6 @@ stdenv.mkDerivation rec { homepage = "https://gitlab.com/news-flash/news_flash_gtk"; license = licenses.gpl3Plus; maintainers = with maintainers; [ kira-bruneau ]; + platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsflash/no-post-install.patch b/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsflash/no-post-install.patch index cfdec206e7..b638f30cd4 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsflash/no-post-install.patch +++ b/third_party/nixpkgs/pkgs/applications/networking/feedreaders/newsflash/no-post-install.patch @@ -1,5 +1,5 @@ diff --git a/meson.build b/meson.build -index 53f911c..361a233 100644 +index 1d7089c..1952e7f 100644 --- a/meson.build +++ b/meson.build @@ -61,5 +61,3 @@ meson.add_dist_script( diff --git a/third_party/nixpkgs/pkgs/applications/networking/ftp/filezilla/default.nix b/third_party/nixpkgs/pkgs/applications/networking/ftp/filezilla/default.nix index df993625e6..5472782758 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/ftp/filezilla/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/ftp/filezilla/default.nix @@ -11,6 +11,7 @@ , pugixml , sqlite , tinyxml +, wrapGAppsHook , wxGTK30-gtk3 , xdg-utils }: @@ -35,7 +36,7 @@ stdenv.mkDerivation rec { "--disable-autoupdatecheck" ]; - nativeBuildInputs = [ autoreconfHook pkg-config ]; + nativeBuildInputs = [ autoreconfHook pkg-config wrapGAppsHook ]; buildInputs = [ dbus diff --git a/third_party/nixpkgs/pkgs/applications/networking/hpmyroom/default.nix b/third_party/nixpkgs/pkgs/applications/networking/hpmyroom/default.nix index 63d0d0b297..64a237480c 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/hpmyroom/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/hpmyroom/default.nix @@ -1,5 +1,5 @@ { mkDerivation, stdenv, lib, fetchurl, rpmextract, autoPatchelfHook , libuuid -, libXtst, libXfixes, glib, gst_all_1, alsaLib, freetype, fontconfig , libXext +, libXtst, libXfixes, glib, gst_all_1, alsa-lib, freetype, fontconfig , libXext , libGL, libpng, libXScrnSaver, libxcb, xorg, libpulseaudio, libdrm }: mkDerivation rec { @@ -16,7 +16,7 @@ mkDerivation rec { ]; buildInputs = [ - libuuid libXtst libXScrnSaver libXfixes alsaLib freetype fontconfig libXext + libuuid libXtst libXScrnSaver libXfixes alsa-lib freetype fontconfig libXext libGL libpng libxcb libpulseaudio libdrm glib # For libgobject stdenv.cc.cc # For libstdc++ diff --git a/third_party/nixpkgs/pkgs/applications/networking/hyprspace/default.nix b/third_party/nixpkgs/pkgs/applications/networking/hyprspace/default.nix new file mode 100644 index 0000000000..7f79295719 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/networking/hyprspace/default.nix @@ -0,0 +1,25 @@ +{ lib, stdenv, buildGoModule, fetchFromGitHub, iproute2mac }: + +buildGoModule rec { + pname = "hyprspace"; + version = "0.1.5"; + + propagatedBuildInputs = lib.optional stdenv.isDarwin iproute2mac; + + src = fetchFromGitHub { + owner = pname; + repo = pname; + rev = "v${version}"; + sha256 = "sha256-aLODIaDbSLVEog/F0FVx6ykadCggE0Vebzwjw0sqYJ0="; + }; + + vendorSha256 = "sha256-rw75xNBBV58F+HBVtD/EslPWxZxLbI3/mJVdJF4usKI="; + + meta = with lib; { + description = "A Lightweight VPN Built on top of Libp2p for Truly Distributed Networks."; + homepage = "https://github.com/hyprspace/hyprspace"; + license = licenses.asl20; + maintainers = with maintainers; [ yusdacra ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/baresip/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/baresip/default.nix index 0c6b33e04a..03f0bf6381 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/baresip/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/baresip/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, zlib, openssl, libre, librem, pkg-config, gst_all_1 -, cairo, mpg123, alsaLib, SDL, libv4l, celt, libsndfile, srtp, ffmpeg +, cairo, mpg123, alsa-lib, SDL, libv4l, celt, libsndfile, srtp, ffmpeg , gsm, speex, portaudio, spandsp, libuuid, libvpx }: stdenv.mkDerivation rec { @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config ]; buildInputs = [zlib openssl libre librem cairo mpg123 - alsaLib SDL libv4l celt libsndfile srtp ffmpeg gsm speex portaudio spandsp libuuid + alsa-lib SDL libv4l celt libsndfile srtp ffmpeg gsm speex portaudio spandsp libuuid libvpx ] ++ (with gst_all_1; [ gstreamer gst-libav gst-plugins-base gst-plugins-bad gst-plugins-good ]); makeFlags = [ diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/bluejeans/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/bluejeans/default.nix index b3cd9d8c14..adc19f5dcf 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/bluejeans/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/bluejeans/default.nix @@ -32,20 +32,23 @@ , libXft , libXcomposite , libXScrnSaver -, alsaLib +, alsa-lib , pulseaudio , makeWrapper , xdg-utils }: +let + getFirst = n: v: builtins.concatStringsSep "." (lib.take n (lib.splitString "." v)); +in + stdenv.mkDerivation rec { pname = "bluejeans"; - version = "2.21.3"; - buildNumber = "2"; + version = "2.22.0.87"; src = fetchurl { - url = "https://swdl.bluejeans.com/desktop-app/linux/${version}/BlueJeans_${version}.${buildNumber}.rpm"; - sha256 = "sha256-a/REuxkqZmLLa7N3CUgUAdq74VMD9D10a/Sx2jOj1QA="; + url = "https://swdl.bluejeans.com/desktop-app/linux/${getFirst 3 version}/BlueJeans_${version}.rpm"; + sha256 = "sha256-0nobn+YcvqakwvBdkoEJrzHoL+OGym2zJ806oUabYfo="; }; nativeBuildInputs = [ rpmextract makeWrapper ]; @@ -84,7 +87,7 @@ stdenv.mkDerivation rec { libXft libXcomposite libXScrnSaver - alsaLib + alsa-lib pulseaudio ]; @@ -106,7 +109,7 @@ stdenv.mkDerivation rec { --set-interpreter $(cat $NIX_CC/nix-support/dynamic-linker) \ opt/BlueJeans/resources/BluejeansHelper - cc $localtime64_stub -shared -o "$out"/opt/BlueJeans/liblocaltime64_stub.so + cc $localtime64_stub -shared -o "${placeholder "out"}"/opt/BlueJeans/liblocaltime64_stub.so makeWrapper $out/opt/BlueJeans/bluejeans-v2 $out/bin/bluejeans \ --set LD_LIBRARY_PATH "${libPath}":"${placeholder "out"}"/opt/BlueJeans \ @@ -119,6 +122,8 @@ stdenv.mkDerivation rec { patchShebangs "$out" ''; + passthru.updateScript = ./update.sh; + meta = with lib; { description = "Video, audio, and web conferencing that works together with the collaboration tools you use every day"; homepage = "https://www.bluejeans.com"; @@ -127,3 +132,4 @@ stdenv.mkDerivation rec { platforms = [ "x86_64-linux" ]; }; } + diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/bluejeans/update.sh b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/bluejeans/update.sh new file mode 100755 index 0000000000..2c52746200 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/bluejeans/update.sh @@ -0,0 +1,12 @@ +#!/usr/bin/env nix-shell +#!nix-shell -i bash -p curl pup common-updater-scripts + +set -eu -o pipefail + +version="$(curl -Ls https://www.bluejeans.com/download | \ + pup 'a[aria-label~="Linux"] attr{href}' | \ + #output contains *.deb and *.rpm + grep "\.rpm" | \ + awk -F'[ ._ ]' '{printf $6"."$7"."$8"."$9"\n"}')" + +update-source-version bluejeans-gui "$version" diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/dino/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/dino/default.nix index d07b7d2912..d4332c0265 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/dino/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/dino/default.nix @@ -18,24 +18,15 @@ stdenv.mkDerivation rec { pname = "dino"; - version = "0.2.0"; + version = "0.2.1"; src = fetchFromGitHub { owner = "dino"; repo = "dino"; rev = "v${version}"; - sha256 = "0wy1hb3kz3k4gqqwx308n37cqag2d017jwfz0b5s30nkx2pbwspw"; + sha256 = "11m38syqzb1z92wmdaf45gryl6gjxwbcnk32j4p984ipqj2vdzd8"; }; - patches = [ - # Fixes https://github.com/dino/dino/issues/1010 (double' is not a supported generic type argument) - (fetchpatch { - name = "dino-vala-boxing.patch"; - url = "https://github.com/dino/dino/commit/9acb54df9254609f2fe4de83c9047d408412de28.patch"; - sha256 = "1jz4r7d8b1ljwgq846wihp864b6gjdkgh6fnmxh13b2i10x52xsm"; - }) - ]; - nativeBuildInputs = [ vala cmake diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/discord/base.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/discord/base.nix index 110d3ffb00..a8b2b02f0b 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/discord/base.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/discord/base.nix @@ -1,6 +1,6 @@ { pname, version, src, binaryName, desktopName , autoPatchelfHook, makeDesktopItem, lib, stdenv, wrapGAppsHook -, alsaLib, at-spi2-atk, at-spi2-core, atk, cairo, cups, dbus, expat, fontconfig +, alsa-lib, at-spi2-atk, at-spi2-core, atk, cairo, cups, dbus, expat, fontconfig , freetype, gdk-pixbuf, glib, gtk3, libcxx, libdrm, libnotify, libpulseaudio, libuuid , libX11, libXScrnSaver, libXcomposite, libXcursor, libXdamage, libXext , libXfixes, libXi, libXrandr, libXrender, libXtst, libxcb, libxshmfence @@ -13,7 +13,7 @@ in stdenv.mkDerivation rec { inherit pname version src; nativeBuildInputs = [ - alsaLib + alsa-lib autoPatchelfHook cups libdrm @@ -33,7 +33,7 @@ in stdenv.mkDerivation rec { libPath = lib.makeLibraryPath [ libcxx systemd libpulseaudio libdrm mesa - stdenv.cc.cc alsaLib atk at-spi2-atk at-spi2-core cairo cups dbus expat fontconfig freetype + stdenv.cc.cc alsa-lib atk at-spi2-atk at-spi2-core cairo cups dbus expat fontconfig freetype gdk-pixbuf glib gtk3 libnotify libX11 libXcomposite libuuid libXcursor libXdamage libXext libXfixes libXi libXrandr libXrender libXtst nspr nss libxcb pango systemd libXScrnSaver @@ -54,6 +54,8 @@ in stdenv.mkDerivation rec { --prefix LD_LIBRARY_PATH : ${libPath}:$out/opt/${binaryName} ln -s $out/opt/${binaryName}/${binaryName} $out/bin/ + # Without || true the install would fail on case-insensitive filesystems + ln -s $out/opt/${binaryName}/${binaryName} $out/bin/${lib.strings.toLower binaryName} || true ln -s $out/opt/${binaryName}/discord.png $out/share/pixmaps/${pname}.png ln -s "${desktopItem}/share/applications" $out/share/ diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/discord/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/discord/default.nix index e486cd9de6..f7435aa3ae 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/discord/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/discord/default.nix @@ -27,10 +27,10 @@ in { pname = "discord-canary"; binaryName = "DiscordCanary"; desktopName = "Discord Canary"; - version = "0.0.124"; + version = "0.0.125"; src = fetchurl { url = "https://dl-canary.discordapp.net/apps/linux/${version}/discord-canary-${version}.tar.gz"; - sha256 = "060ypr9rn5yl8iwh4v3ax1v6501yaq72sx50q47sm0wyxn7gpv91"; + sha256 = "0ly5a6l7rvl54mc39xma14jrcrf11q3ndnkkr16by5hy3palmz9g"; }; }; }.${branch} diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop-package.json b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop-package.json index 901e056025..063c64fa37 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop-package.json +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop-package.json @@ -2,7 +2,7 @@ "name": "element-desktop", "productName": "Element", "main": "src/electron-main.js", - "version": "1.7.29", + "version": "1.7.31", "description": "A feature-rich client for Matrix.org", "author": "Element", "repository": { @@ -43,12 +43,13 @@ }, "devDependencies": { "asar": "^2.0.1", - "electron-builder": "22.10.5", - "electron-builder-squirrel-windows": "22.10.5", + "electron-builder": "22.11.4", + "electron-builder-squirrel-windows": "22.11.4", "electron-devtools-installer": "^3.1.1", "electron-notarize": "^1.0.0", - "eslint": "7.3.1", - "eslint-config-matrix-org": "^0.1.2", + "eslint": "7.18.0", + "eslint-config-google": "^0.14.0", + "eslint-plugin-matrix-org": "github:matrix-org/eslint-plugin-matrix-org#main", "find-npm-prefix": "^1.0.2", "fs-extra": "^8.1.0", "glob": "^7.1.6", @@ -67,7 +68,7 @@ }, "build": { "appId": "im.riot.app", - "electronVersion": "12.0.2", + "electronVersion": "12.0.11", "files": [ "package.json", { diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop-yarndeps.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop-yarndeps.nix index 7d26fbbbff..733cfa3a11 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop-yarndeps.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop-yarndeps.nix @@ -1,14 +1,6 @@ { fetchurl, fetchgit, linkFarm, runCommandNoCC, gnutar }: rec { offline_cache = linkFarm "offline" packages; packages = [ - { - name = "7zip_bin___7zip_bin_5.0.3.tgz"; - path = fetchurl { - name = "7zip_bin___7zip_bin_5.0.3.tgz"; - url = "https://registry.yarnpkg.com/7zip-bin/-/7zip-bin-5.0.3.tgz"; - sha1 = "bc5b5532ecafd923a61f2fb097e3b108c0106a3f"; - }; - } { name = "7zip_bin___7zip_bin_5.1.1.tgz"; path = fetchurl { @@ -25,14 +17,6 @@ sha1 = "bc0782f6d69f7b7d49531219699b988f669a8f9d"; }; } - { - name = "_babel_code_frame___code_frame_7.10.4.tgz"; - path = fetchurl { - name = "_babel_code_frame___code_frame_7.10.4.tgz"; - url = "https://registry.yarnpkg.com/@babel/code-frame/-/code-frame-7.10.4.tgz"; - sha1 = "168da1a36e90da68ae8d49c0f1b48c7c6249213a"; - }; - } { name = "_babel_code_frame___code_frame_7.12.13.tgz"; path = fetchurl { @@ -41,14 +25,6 @@ sha1 = "dcfc826beef65e75c50e21d3837d7d95798dd658"; }; } - { - name = "_babel_generator___generator_7.10.5.tgz"; - path = fetchurl { - name = "_babel_generator___generator_7.10.5.tgz"; - url = "https://registry.yarnpkg.com/@babel/generator/-/generator-7.10.5.tgz"; - sha1 = "1b903554bc8c583ee8d25f1e8969732e6b829a69"; - }; - } { name = "_babel_generator___generator_7.13.16.tgz"; path = fetchurl { @@ -57,14 +33,6 @@ sha1 = "0befc287031a201d84cdfc173b46b320ae472d14"; }; } - { - name = "_babel_helper_function_name___helper_function_name_7.10.4.tgz"; - path = fetchurl { - name = "_babel_helper_function_name___helper_function_name_7.10.4.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-function-name/-/helper-function-name-7.10.4.tgz"; - sha1 = "d2d3b20c59ad8c47112fa7d2a94bc09d5ef82f1a"; - }; - } { name = "_babel_helper_function_name___helper_function_name_7.12.13.tgz"; path = fetchurl { @@ -73,14 +41,6 @@ sha1 = "93ad656db3c3c2232559fd7b2c3dbdcbe0eb377a"; }; } - { - name = "_babel_helper_get_function_arity___helper_get_function_arity_7.10.4.tgz"; - path = fetchurl { - name = "_babel_helper_get_function_arity___helper_get_function_arity_7.10.4.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-get-function-arity/-/helper-get-function-arity-7.10.4.tgz"; - sha1 = "98c1cbea0e2332f33f9a4661b8ce1505b2c19ba2"; - }; - } { name = "_babel_helper_get_function_arity___helper_get_function_arity_7.12.13.tgz"; path = fetchurl { @@ -89,14 +49,6 @@ sha1 = "bc63451d403a3b3082b97e1d8b3fe5bd4091e583"; }; } - { - name = "_babel_helper_split_export_declaration___helper_split_export_declaration_7.10.4.tgz"; - path = fetchurl { - name = "_babel_helper_split_export_declaration___helper_split_export_declaration_7.10.4.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-split-export-declaration/-/helper-split-export-declaration-7.10.4.tgz"; - sha1 = "2c70576eaa3b5609b24cb99db2888cc3fc4251d1"; - }; - } { name = "_babel_helper_split_export_declaration___helper_split_export_declaration_7.12.13.tgz"; path = fetchurl { @@ -105,14 +57,6 @@ sha1 = "e9430be00baf3e88b0e13e6f9d4eaf2136372b05"; }; } - { - name = "_babel_helper_validator_identifier___helper_validator_identifier_7.10.4.tgz"; - path = fetchurl { - name = "_babel_helper_validator_identifier___helper_validator_identifier_7.10.4.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-validator-identifier/-/helper-validator-identifier-7.10.4.tgz"; - sha1 = "a78c7a7251e01f616512d31b10adcf52ada5e0d2"; - }; - } { name = "_babel_helper_validator_identifier___helper_validator_identifier_7.12.11.tgz"; path = fetchurl { @@ -129,14 +73,6 @@ sha1 = "56d11312bd9248fa619591d02472be6e8cb32540"; }; } - { - name = "_babel_highlight___highlight_7.10.4.tgz"; - path = fetchurl { - name = "_babel_highlight___highlight_7.10.4.tgz"; - url = "https://registry.yarnpkg.com/@babel/highlight/-/highlight-7.10.4.tgz"; - sha1 = "7d1bdfd65753538fabe6c38596cdb76d9ac60143"; - }; - } { name = "_babel_highlight___highlight_7.13.10.tgz"; path = fetchurl { @@ -145,14 +81,6 @@ sha1 = "a8b2a66148f5b27d666b15d81774347a731d52d1"; }; } - { - name = "_babel_parser___parser_7.10.5.tgz"; - path = fetchurl { - name = "_babel_parser___parser_7.10.5.tgz"; - url = "https://registry.yarnpkg.com/@babel/parser/-/parser-7.10.5.tgz"; - sha1 = "e7c6bf5a7deff957cec9f04b551e2762909d826b"; - }; - } { name = "_babel_parser___parser_7.13.16.tgz"; path = fetchurl { @@ -169,14 +97,6 @@ sha1 = "f549c13c754cc40b87644b9fa9f09a6a95fe0736"; }; } - { - name = "_babel_template___template_7.10.4.tgz"; - path = fetchurl { - name = "_babel_template___template_7.10.4.tgz"; - url = "https://registry.yarnpkg.com/@babel/template/-/template-7.10.4.tgz"; - sha1 = "3251996c4200ebc71d1a8fc405fba940f36ba278"; - }; - } { name = "_babel_template___template_7.12.13.tgz"; path = fetchurl { @@ -193,22 +113,6 @@ sha1 = "c85415e0c7d50ac053d758baec98b28b2ecfeea3"; }; } - { - name = "_babel_traverse___traverse_7.10.5.tgz"; - path = fetchurl { - name = "_babel_traverse___traverse_7.10.5.tgz"; - url = "https://registry.yarnpkg.com/@babel/traverse/-/traverse-7.10.5.tgz"; - sha1 = "77ce464f5b258be265af618d8fddf0536f20b564"; - }; - } - { - name = "_babel_types___types_7.10.5.tgz"; - path = fetchurl { - name = "_babel_types___types_7.10.5.tgz"; - url = "https://registry.yarnpkg.com/@babel/types/-/types-7.10.5.tgz"; - sha1 = "d88ae7e2fde86bfbfe851d4d81afa70a997b5d15"; - }; - } { name = "_babel_types___types_7.13.17.tgz"; path = fetchurl { @@ -226,11 +130,19 @@ }; } { - name = "_electron_universal___universal_1.0.4.tgz"; + name = "_electron_universal___universal_1.0.5.tgz"; path = fetchurl { - name = "_electron_universal___universal_1.0.4.tgz"; - url = "https://registry.yarnpkg.com/@electron/universal/-/universal-1.0.4.tgz"; - sha1 = "231ac246c39d45b80e159bd21c3f9027dcaa10f5"; + name = "_electron_universal___universal_1.0.5.tgz"; + url = "https://registry.yarnpkg.com/@electron/universal/-/universal-1.0.5.tgz"; + sha1 = "b812340e4ef21da2b3ee77b2b4d35c9b86defe37"; + }; + } + { + name = "_eslint_eslintrc___eslintrc_0.3.0.tgz"; + path = fetchurl { + name = "_eslint_eslintrc___eslintrc_0.3.0.tgz"; + url = "https://registry.yarnpkg.com/@eslint/eslintrc/-/eslintrc-0.3.0.tgz"; + sha1 = "d736d6963d7003b6514e6324bec9c602ac340318"; }; } { @@ -497,6 +409,14 @@ sha1 = "504af200af6b98e198bce768bc1730c6936ae01d"; }; } + { + name = "_malept_flatpak_bundler___flatpak_bundler_0.4.0.tgz"; + path = fetchurl { + name = "_malept_flatpak_bundler___flatpak_bundler_0.4.0.tgz"; + url = "https://registry.yarnpkg.com/@malept/flatpak-bundler/-/flatpak-bundler-0.4.0.tgz"; + sha1 = "e8a32c30a95d20c2b1bb635cc580981a06389858"; + }; + } { name = "_sindresorhus_is___is_0.14.0.tgz"; path = fetchurl { @@ -530,19 +450,11 @@ }; } { - name = "_types_eslint_visitor_keys___eslint_visitor_keys_1.0.0.tgz"; + name = "_types_fs_extra___fs_extra_9.0.11.tgz"; path = fetchurl { - name = "_types_eslint_visitor_keys___eslint_visitor_keys_1.0.0.tgz"; - url = "https://registry.yarnpkg.com/@types/eslint-visitor-keys/-/eslint-visitor-keys-1.0.0.tgz"; - sha1 = "1ee30d79544ca84d68d4b3cdb0af4f205663dd2d"; - }; - } - { - name = "_types_fs_extra___fs_extra_9.0.9.tgz"; - path = fetchurl { - name = "_types_fs_extra___fs_extra_9.0.9.tgz"; - url = "https://registry.yarnpkg.com/@types/fs-extra/-/fs-extra-9.0.9.tgz"; - sha1 = "11ed43b3f3c6b3490f1ef9bd17f58da896e2d861"; + name = "_types_fs_extra___fs_extra_9.0.11.tgz"; + url = "https://registry.yarnpkg.com/@types/fs-extra/-/fs-extra-9.0.11.tgz"; + sha1 = "8cc99e103499eab9f347dbc6ca4e99fb8d2c2b87"; }; } { @@ -553,22 +465,6 @@ sha1 = "e6ba80f36b7daad2c685acd9266382e68985c183"; }; } - { - name = "_types_json_schema___json_schema_7.0.5.tgz"; - path = fetchurl { - name = "_types_json_schema___json_schema_7.0.5.tgz"; - url = "https://registry.yarnpkg.com/@types/json-schema/-/json-schema-7.0.5.tgz"; - sha1 = "dcce4430e64b443ba8945f0290fb564ad5bac6dd"; - }; - } - { - name = "_types_json5___json5_0.0.29.tgz"; - path = fetchurl { - name = "_types_json5___json5_0.0.29.tgz"; - url = "https://registry.yarnpkg.com/@types/json5/-/json5-0.0.29.tgz"; - sha1 = "ee28707ae94e11d2b827bcbe5270bcea7f3e71ee"; - }; - } { name = "_types_minimatch___minimatch_3.0.4.tgz"; path = fetchurl { @@ -618,59 +514,11 @@ }; } { - name = "_types_yargs___yargs_15.0.13.tgz"; + name = "_types_yargs___yargs_16.0.3.tgz"; path = fetchurl { - name = "_types_yargs___yargs_15.0.13.tgz"; - url = "https://registry.yarnpkg.com/@types/yargs/-/yargs-15.0.13.tgz"; - sha1 = "34f7fec8b389d7f3c1fd08026a5763e072d3c6dc"; - }; - } - { - name = "_typescript_eslint_eslint_plugin___eslint_plugin_3.7.0.tgz"; - path = fetchurl { - name = "_typescript_eslint_eslint_plugin___eslint_plugin_3.7.0.tgz"; - url = "https://registry.yarnpkg.com/@typescript-eslint/eslint-plugin/-/eslint-plugin-3.7.0.tgz"; - sha1 = "0f91aa3c83d019591719e597fbdb73a59595a263"; - }; - } - { - name = "_typescript_eslint_experimental_utils___experimental_utils_3.7.0.tgz"; - path = fetchurl { - name = "_typescript_eslint_experimental_utils___experimental_utils_3.7.0.tgz"; - url = "https://registry.yarnpkg.com/@typescript-eslint/experimental-utils/-/experimental-utils-3.7.0.tgz"; - sha1 = "0ee21f6c48b2b30c63211da23827725078d5169a"; - }; - } - { - name = "_typescript_eslint_parser___parser_3.7.0.tgz"; - path = fetchurl { - name = "_typescript_eslint_parser___parser_3.7.0.tgz"; - url = "https://registry.yarnpkg.com/@typescript-eslint/parser/-/parser-3.7.0.tgz"; - sha1 = "3e9cd9df9ea644536feb6e5acdb8279ecff96ce9"; - }; - } - { - name = "_typescript_eslint_types___types_3.7.0.tgz"; - path = fetchurl { - name = "_typescript_eslint_types___types_3.7.0.tgz"; - url = "https://registry.yarnpkg.com/@typescript-eslint/types/-/types-3.7.0.tgz"; - sha1 = "09897fab0cb95479c01166b10b2c03c224821077"; - }; - } - { - name = "_typescript_eslint_typescript_estree___typescript_estree_3.7.0.tgz"; - path = fetchurl { - name = "_typescript_eslint_typescript_estree___typescript_estree_3.7.0.tgz"; - url = "https://registry.yarnpkg.com/@typescript-eslint/typescript-estree/-/typescript-estree-3.7.0.tgz"; - sha1 = "66872e6da120caa4b64e6b4ca5c8702afc74738d"; - }; - } - { - name = "_typescript_eslint_visitor_keys___visitor_keys_3.7.0.tgz"; - path = fetchurl { - name = "_typescript_eslint_visitor_keys___visitor_keys_3.7.0.tgz"; - url = "https://registry.yarnpkg.com/@typescript-eslint/visitor-keys/-/visitor-keys-3.7.0.tgz"; - sha1 = "ac0417d382a136e4571a0b0dcfe52088cb628177"; + name = "_types_yargs___yargs_16.0.3.tgz"; + url = "https://registry.yarnpkg.com/@types/yargs/-/yargs-16.0.3.tgz"; + sha1 = "4b6d35bb8e680510a7dc2308518a80ee1ef27e01"; }; } { @@ -690,19 +538,19 @@ }; } { - name = "acorn_jsx___acorn_jsx_5.2.0.tgz"; + name = "acorn_jsx___acorn_jsx_5.3.1.tgz"; path = fetchurl { - name = "acorn_jsx___acorn_jsx_5.2.0.tgz"; - url = "https://registry.yarnpkg.com/acorn-jsx/-/acorn-jsx-5.2.0.tgz"; - sha1 = "4c66069173d6fdd68ed85239fc256226182b2ebe"; + name = "acorn_jsx___acorn_jsx_5.3.1.tgz"; + url = "https://registry.yarnpkg.com/acorn-jsx/-/acorn-jsx-5.3.1.tgz"; + sha1 = "fc8661e11b7ac1539c47dbfea2e72b3af34d267b"; }; } { - name = "acorn___acorn_7.3.1.tgz"; + name = "acorn___acorn_7.4.1.tgz"; path = fetchurl { - name = "acorn___acorn_7.3.1.tgz"; - url = "https://registry.yarnpkg.com/acorn/-/acorn-7.3.1.tgz"; - sha1 = "85010754db53c3fbaf3b9ea3e083aa5c5d147ffd"; + name = "acorn___acorn_7.4.1.tgz"; + url = "https://registry.yarnpkg.com/acorn/-/acorn-7.4.1.tgz"; + sha1 = "feaed255973d2e77555b83dbc08851a6c63520fa"; }; } { @@ -745,14 +593,6 @@ sha1 = "18c5af38a111ddeb4f2697bd78d68abc1cabd706"; }; } - { - name = "ajv___ajv_6.10.2.tgz"; - path = fetchurl { - name = "ajv___ajv_6.10.2.tgz"; - url = "https://registry.yarnpkg.com/ajv/-/ajv-6.10.2.tgz"; - sha1 = "d3cea04d6b017b2894ad69040fec8b623eb4bd52"; - }; - } { name = "ajv___ajv_6.12.2.tgz"; path = fetchurl { @@ -777,6 +617,22 @@ sha1 = "19b0e8bae8f476e5ba666300387775fb1a00a4da"; }; } + { + name = "ajv___ajv_6.10.2.tgz"; + path = fetchurl { + name = "ajv___ajv_6.10.2.tgz"; + url = "https://registry.yarnpkg.com/ajv/-/ajv-6.10.2.tgz"; + sha1 = "d3cea04d6b017b2894ad69040fec8b623eb4bd52"; + }; + } + { + name = "ajv___ajv_8.5.0.tgz"; + path = fetchurl { + name = "ajv___ajv_8.5.0.tgz"; + url = "https://registry.yarnpkg.com/ajv/-/ajv-8.5.0.tgz"; + sha1 = "695528274bcb5afc865446aa275484049a18ae4b"; + }; + } { name = "ansi_align___ansi_align_2.0.0.tgz"; path = fetchurl { @@ -801,14 +657,6 @@ sha1 = "cbb9ae256bf750af1eab344f229aa27fe94ba348"; }; } - { - name = "ansi_escapes___ansi_escapes_4.3.1.tgz"; - path = fetchurl { - name = "ansi_escapes___ansi_escapes_4.3.1.tgz"; - url = "https://registry.yarnpkg.com/ansi-escapes/-/ansi-escapes-4.3.1.tgz"; - sha1 = "a5c47cc43181f1f38ffd7076837700d395522a61"; - }; - } { name = "ansi_regex___ansi_regex_2.1.1.tgz"; path = fetchurl { @@ -882,19 +730,19 @@ }; } { - name = "app_builder_bin___app_builder_bin_3.5.12.tgz"; + name = "app_builder_bin___app_builder_bin_3.5.13.tgz"; path = fetchurl { - name = "app_builder_bin___app_builder_bin_3.5.12.tgz"; - url = "https://registry.yarnpkg.com/app-builder-bin/-/app-builder-bin-3.5.12.tgz"; - sha1 = "bbe174972cc1f481f73d6d92ad47a8b4c7eb4530"; + name = "app_builder_bin___app_builder_bin_3.5.13.tgz"; + url = "https://registry.yarnpkg.com/app-builder-bin/-/app-builder-bin-3.5.13.tgz"; + sha1 = "6dd7f4de34a4e408806f99b8c7d6ef1601305b7e"; }; } { - name = "app_builder_lib___app_builder_lib_22.10.5.tgz"; + name = "app_builder_lib___app_builder_lib_22.11.4.tgz"; path = fetchurl { - name = "app_builder_lib___app_builder_lib_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/app-builder-lib/-/app-builder-lib-22.10.5.tgz"; - sha1 = "24a88581c891e5b187a0d569aa44e7c4a0dc8de2"; + name = "app_builder_lib___app_builder_lib_22.11.4.tgz"; + url = "https://registry.yarnpkg.com/app-builder-lib/-/app-builder-lib-22.11.4.tgz"; + sha1 = "f476e8f1c843d2bcce0348d60e2deae3a71b3474"; }; } { @@ -969,30 +817,6 @@ sha1 = "246f50f3ca78a3240f6c997e8a9bd1eac49e4b38"; }; } - { - name = "array_includes___array_includes_3.1.1.tgz"; - path = fetchurl { - name = "array_includes___array_includes_3.1.1.tgz"; - url = "https://registry.yarnpkg.com/array-includes/-/array-includes-3.1.1.tgz"; - sha1 = "cdd67e6852bdf9c1215460786732255ed2459348"; - }; - } - { - name = "array.prototype.flat___array.prototype.flat_1.2.3.tgz"; - path = fetchurl { - name = "array.prototype.flat___array.prototype.flat_1.2.3.tgz"; - url = "https://registry.yarnpkg.com/array.prototype.flat/-/array.prototype.flat-1.2.3.tgz"; - sha1 = "0de82b426b0318dbfdb940089e38b043d37f6c7b"; - }; - } - { - name = "array.prototype.flatmap___array.prototype.flatmap_1.2.3.tgz"; - path = fetchurl { - name = "array.prototype.flatmap___array.prototype.flatmap_1.2.3.tgz"; - url = "https://registry.yarnpkg.com/array.prototype.flatmap/-/array.prototype.flatmap-1.2.3.tgz"; - sha1 = "1c13f84a178566042dd63de4414440db9222e443"; - }; - } { name = "asap___asap_2.0.6.tgz"; path = fetchurl { @@ -1034,11 +858,11 @@ }; } { - name = "astral_regex___astral_regex_1.0.0.tgz"; + name = "astral_regex___astral_regex_2.0.0.tgz"; path = fetchurl { - name = "astral_regex___astral_regex_1.0.0.tgz"; - url = "https://registry.yarnpkg.com/astral-regex/-/astral-regex-1.0.0.tgz"; - sha1 = "6c8c3fb827dd43ee3918f27b82782ab7658a6fd9"; + name = "astral_regex___astral_regex_2.0.0.tgz"; + url = "https://registry.yarnpkg.com/astral-regex/-/astral-regex-2.0.0.tgz"; + sha1 = "483143c567aeed4785759c0865786dc77d7d2e31"; }; } { @@ -1114,19 +938,11 @@ }; } { - name = "babel_eslint___babel_eslint_10.1.0.tgz"; + name = "balanced_match___balanced_match_1.0.2.tgz"; path = fetchurl { - name = "babel_eslint___babel_eslint_10.1.0.tgz"; - url = "https://registry.yarnpkg.com/babel-eslint/-/babel-eslint-10.1.0.tgz"; - sha1 = "6968e568a910b78fb3779cdd8b6ac2f479943232"; - }; - } - { - name = "balanced_match___balanced_match_1.0.0.tgz"; - path = fetchurl { - name = "balanced_match___balanced_match_1.0.0.tgz"; - url = "https://registry.yarnpkg.com/balanced-match/-/balanced-match-1.0.0.tgz"; - sha1 = "89b4d199ab2bee49de164ea02b89ce462d71b767"; + name = "balanced_match___balanced_match_1.0.2.tgz"; + url = "https://registry.yarnpkg.com/balanced-match/-/balanced-match-1.0.2.tgz"; + sha1 = "e83e3a7e3f300b34cb9d87f615fa0cbf357690ee"; }; } { @@ -1169,14 +985,6 @@ sha1 = "bd39aadab5dc4bdac222a07df5baf1af745b2228"; }; } - { - name = "binaryextensions___binaryextensions_4.15.0.tgz"; - path = fetchurl { - name = "binaryextensions___binaryextensions_4.15.0.tgz"; - url = "https://registry.yarnpkg.com/binaryextensions/-/binaryextensions-4.15.0.tgz"; - sha1 = "c63a502e0078ff1b0e9b00a9f74d3c2b0f8bd32e"; - }; - } { name = "bl___bl_4.0.3.tgz"; path = fetchurl { @@ -1282,19 +1090,19 @@ }; } { - name = "builder_util_runtime___builder_util_runtime_8.7.3.tgz"; + name = "builder_util_runtime___builder_util_runtime_8.7.5.tgz"; path = fetchurl { - name = "builder_util_runtime___builder_util_runtime_8.7.3.tgz"; - url = "https://registry.yarnpkg.com/builder-util-runtime/-/builder-util-runtime-8.7.3.tgz"; - sha1 = "0aaafa52d25295c939496f62231ca9ff06c30e40"; + name = "builder_util_runtime___builder_util_runtime_8.7.5.tgz"; + url = "https://registry.yarnpkg.com/builder-util-runtime/-/builder-util-runtime-8.7.5.tgz"; + sha1 = "fbe59e274818885e0d2e358d5b7017c34ae6b0f5"; }; } { - name = "builder_util___builder_util_22.10.5.tgz"; + name = "builder_util___builder_util_22.11.4.tgz"; path = fetchurl { - name = "builder_util___builder_util_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/builder-util/-/builder-util-22.10.5.tgz"; - sha1 = "8d0b04a3be6acc74938679aa90dcb3181b1ae86b"; + name = "builder_util___builder_util_22.11.4.tgz"; + url = "https://registry.yarnpkg.com/builder-util/-/builder-util-22.11.4.tgz"; + sha1 = "5deee8e067d6e3248791977ce2928b98fe514342"; }; } { @@ -1321,6 +1129,14 @@ sha1 = "4b651039a5ecd96767e71a3d7ed380e48bed4191"; }; } + { + name = "cacache___cacache_12.0.4.tgz"; + path = fetchurl { + name = "cacache___cacache_12.0.4.tgz"; + url = "https://registry.yarnpkg.com/cacache/-/cacache-12.0.4.tgz"; + sha1 = "668bcbd105aeb5f1d92fe25570ec9525c8faa40c"; + }; + } { name = "cacache___cacache_12.0.3.tgz"; path = fetchurl { @@ -1410,11 +1226,11 @@ }; } { - name = "chardet___chardet_0.7.0.tgz"; + name = "chalk___chalk_4.1.1.tgz"; path = fetchurl { - name = "chardet___chardet_0.7.0.tgz"; - url = "https://registry.yarnpkg.com/chardet/-/chardet-0.7.0.tgz"; - sha1 = "90094849f0937f2eedc2425d0d28a9e5f0cbad9e"; + name = "chalk___chalk_4.1.1.tgz"; + url = "https://registry.yarnpkg.com/chalk/-/chalk-4.1.1.tgz"; + sha1 = "c80b3fab28bf6371e6863325eee67e618b77e6ad"; }; } { @@ -1457,6 +1273,14 @@ sha1 = "67a9e964be31a51e15e5010d58e6f12834002f46"; }; } + { + name = "ci_info___ci_info_3.2.0.tgz"; + path = fetchurl { + name = "ci_info___ci_info_3.2.0.tgz"; + url = "https://registry.yarnpkg.com/ci-info/-/ci-info-3.2.0.tgz"; + sha1 = "2876cb948a498797b5236f0095bc057d0dca38b6"; + }; + } { name = "cidr_regex___cidr_regex_2.0.10.tgz"; path = fetchurl { @@ -1489,14 +1313,6 @@ sha1 = "6732d972979efc2ae444a1f08e08fa139c96a18e"; }; } - { - name = "cli_cursor___cli_cursor_3.1.0.tgz"; - path = fetchurl { - name = "cli_cursor___cli_cursor_3.1.0.tgz"; - url = "https://registry.yarnpkg.com/cli-cursor/-/cli-cursor-3.1.0.tgz"; - sha1 = "264305a7ae490d1d03bf0c9ba7c925d1753af307"; - }; - } { name = "cli_table3___cli_table3_0.5.1.tgz"; path = fetchurl { @@ -1513,14 +1329,6 @@ sha1 = "2b2dfd83c53cfd3572b87fc4d430a808afb04086"; }; } - { - name = "cli_width___cli_width_3.0.0.tgz"; - path = fetchurl { - name = "cli_width___cli_width_3.0.0.tgz"; - url = "https://registry.yarnpkg.com/cli-width/-/cli-width-3.0.0.tgz"; - sha1 = "a2f48437a2caa9a22436e794bf071ec9e61cedf6"; - }; - } { name = "cliui___cliui_3.2.0.tgz"; path = fetchurl { @@ -1729,14 +1537,6 @@ sha1 = "3d7cf4464db6446ea644bf4b39507f9851008e8e"; }; } - { - name = "contains_path___contains_path_0.1.0.tgz"; - path = fetchurl { - name = "contains_path___contains_path_0.1.0.tgz"; - url = "https://registry.yarnpkg.com/contains-path/-/contains-path-0.1.0.tgz"; - sha1 = "fe8cf184ff6670b6baef01a9d4861a5cbec4120a"; - }; - } { name = "copy_concurrently___copy_concurrently_1.0.5.tgz"; path = fetchurl { @@ -1801,14 +1601,6 @@ sha1 = "e8bd0efee58fcff6f8f94510a0a554bbfa235449"; }; } - { - name = "cross_spawn___cross_spawn_6.0.5.tgz"; - path = fetchurl { - name = "cross_spawn___cross_spawn_6.0.5.tgz"; - url = "https://registry.yarnpkg.com/cross-spawn/-/cross-spawn-6.0.5.tgz"; - sha1 = "4a5ec7c64dfae22c3a14124dbacdee846d80cbc4"; - }; - } { name = "cross_spawn___cross_spawn_7.0.3.tgz"; path = fetchurl { @@ -1882,11 +1674,11 @@ }; } { - name = "debug___debug_2.6.9.tgz"; + name = "debug___debug_3.2.7.tgz"; path = fetchurl { - name = "debug___debug_2.6.9.tgz"; - url = "https://registry.yarnpkg.com/debug/-/debug-2.6.9.tgz"; - sha1 = "5d128515df134ff327e90a4c93f4e077a536341f"; + name = "debug___debug_3.2.7.tgz"; + url = "https://registry.yarnpkg.com/debug/-/debug-3.2.7.tgz"; + sha1 = "72580b7e9145fb39b6676f9c5e5fb100b934179a"; }; } { @@ -2050,35 +1842,19 @@ }; } { - name = "dmg_builder___dmg_builder_22.10.5.tgz"; + name = "dmg_builder___dmg_builder_22.11.4.tgz"; path = fetchurl { - name = "dmg_builder___dmg_builder_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/dmg-builder/-/dmg-builder-22.10.5.tgz"; - sha1 = "65a33c106ead5a350c7de8997c546559bd6e0e7c"; + name = "dmg_builder___dmg_builder_22.11.4.tgz"; + url = "https://registry.yarnpkg.com/dmg-builder/-/dmg-builder-22.11.4.tgz"; + sha1 = "8e3a31bd835d51d3b686d1a6be6c0d08d3e7b1f4"; }; } { - name = "dmg_license___dmg_license_1.0.8.tgz"; + name = "dmg_license___dmg_license_1.0.9.tgz"; path = fetchurl { - name = "dmg_license___dmg_license_1.0.8.tgz"; - url = "https://registry.yarnpkg.com/dmg-license/-/dmg-license-1.0.8.tgz"; - sha1 = "d52e234815f1a07a59706e5f2a2fea71991cf784"; - }; - } - { - name = "doctrine___doctrine_1.5.0.tgz"; - path = fetchurl { - name = "doctrine___doctrine_1.5.0.tgz"; - url = "https://registry.yarnpkg.com/doctrine/-/doctrine-1.5.0.tgz"; - sha1 = "379dce730f6166f76cefa4e6707a159b02c5a6fa"; - }; - } - { - name = "doctrine___doctrine_2.1.0.tgz"; - path = fetchurl { - name = "doctrine___doctrine_2.1.0.tgz"; - url = "https://registry.yarnpkg.com/doctrine/-/doctrine-2.1.0.tgz"; - sha1 = "5cd01fc101621b42c4cd7f5d1a66243716d3f39d"; + name = "dmg_license___dmg_license_1.0.9.tgz"; + url = "https://registry.yarnpkg.com/dmg-license/-/dmg-license-1.0.9.tgz"; + sha1 = "a2fb8d692af0e30b0730b5afc91ed9edc2d9cb4f"; }; } { @@ -2098,11 +1874,11 @@ }; } { - name = "dot_prop___dot_prop_4.2.0.tgz"; + name = "dot_prop___dot_prop_4.2.1.tgz"; path = fetchurl { - name = "dot_prop___dot_prop_4.2.0.tgz"; - url = "https://registry.yarnpkg.com/dot-prop/-/dot-prop-4.2.0.tgz"; - sha1 = "1f19e0c2e1aa0e32797c49799f2837ac6af69c57"; + name = "dot_prop___dot_prop_4.2.1.tgz"; + url = "https://registry.yarnpkg.com/dot-prop/-/dot-prop-4.2.1.tgz"; + sha1 = "45884194a71fc2cda71cbb4bceb3a4dd2f433ba4"; }; } { @@ -2130,11 +1906,11 @@ }; } { - name = "dotenv___dotenv_8.2.0.tgz"; + name = "dotenv___dotenv_9.0.2.tgz"; path = fetchurl { - name = "dotenv___dotenv_8.2.0.tgz"; - url = "https://registry.yarnpkg.com/dotenv/-/dotenv-8.2.0.tgz"; - sha1 = "97e619259ada750eea3e4ea3e26bceea5424b16a"; + name = "dotenv___dotenv_9.0.2.tgz"; + url = "https://registry.yarnpkg.com/dotenv/-/dotenv-9.0.2.tgz"; + sha1 = "dacc20160935a37dea6364aa1bef819fb9b6ab05"; }; } { @@ -2161,14 +1937,6 @@ sha1 = "3a83a904e54353287874c564b7549386849a98c9"; }; } - { - name = "editions___editions_6.1.0.tgz"; - path = fetchurl { - name = "editions___editions_6.1.0.tgz"; - url = "https://registry.yarnpkg.com/editions/-/editions-6.1.0.tgz"; - sha1 = "ba6c6cf9f4bb571d9e53ea34e771a602e5a66549"; - }; - } { name = "editor___editor_1.0.0.tgz"; path = fetchurl { @@ -2186,19 +1954,19 @@ }; } { - name = "electron_builder_squirrel_windows___electron_builder_squirrel_windows_22.10.5.tgz"; + name = "electron_builder_squirrel_windows___electron_builder_squirrel_windows_22.11.4.tgz"; path = fetchurl { - name = "electron_builder_squirrel_windows___electron_builder_squirrel_windows_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/electron-builder-squirrel-windows/-/electron-builder-squirrel-windows-22.10.5.tgz"; - sha1 = "83d3bf498110341a522cc5263fb4474ae6e05caf"; + name = "electron_builder_squirrel_windows___electron_builder_squirrel_windows_22.11.4.tgz"; + url = "https://registry.yarnpkg.com/electron-builder-squirrel-windows/-/electron-builder-squirrel-windows-22.11.4.tgz"; + sha1 = "6dc50a26396d813f58a4d8e5b90ee3cedb56f4d8"; }; } { - name = "electron_builder___electron_builder_22.10.5.tgz"; + name = "electron_builder___electron_builder_22.11.4.tgz"; path = fetchurl { - name = "electron_builder___electron_builder_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/electron-builder/-/electron-builder-22.10.5.tgz"; - sha1 = "03b156b93e6012609027c3aaa69201a3ad21e454"; + name = "electron_builder___electron_builder_22.11.4.tgz"; + url = "https://registry.yarnpkg.com/electron-builder/-/electron-builder-22.11.4.tgz"; + sha1 = "aadb57a4fc90863e82ebdbc66131400fc3bb4c82"; }; } { @@ -2218,11 +1986,11 @@ }; } { - name = "electron_publish___electron_publish_22.10.5.tgz"; + name = "electron_publish___electron_publish_22.11.4.tgz"; path = fetchurl { - name = "electron_publish___electron_publish_22.10.5.tgz"; - url = "https://registry.yarnpkg.com/electron-publish/-/electron-publish-22.10.5.tgz"; - sha1 = "9cbe46266b6c79d8c6e99840755682e2262d3543"; + name = "electron_publish___electron_publish_22.11.4.tgz"; + url = "https://registry.yarnpkg.com/electron-publish/-/electron-publish-22.11.4.tgz"; + sha1 = "0f526edb7e0c3f0155103ff3b8a2e363a3a392f1"; }; } { @@ -2258,11 +2026,11 @@ }; } { - name = "encoding___encoding_0.1.12.tgz"; + name = "encoding___encoding_0.1.13.tgz"; path = fetchurl { - name = "encoding___encoding_0.1.12.tgz"; - url = "https://registry.yarnpkg.com/encoding/-/encoding-0.1.12.tgz"; - sha1 = "538b66f3ee62cd1ab51ec323829d1f9480c74beb"; + name = "encoding___encoding_0.1.13.tgz"; + url = "https://registry.yarnpkg.com/encoding/-/encoding-0.1.13.tgz"; + sha1 = "56574afdd791f54a8e9b2785c0582a2d26210fa9"; }; } { @@ -2297,14 +2065,6 @@ sha1 = "06e0116d3028f6aef4806849eb0ea6a748ae6960"; }; } - { - name = "errlop___errlop_4.1.0.tgz"; - path = fetchurl { - name = "errlop___errlop_4.1.0.tgz"; - url = "https://registry.yarnpkg.com/errlop/-/errlop-4.1.0.tgz"; - sha1 = "8e7b8f4f1bf0a6feafce4d14f0c0cf4bf5ef036b"; - }; - } { name = "errno___errno_0.1.7.tgz"; path = fetchurl { @@ -2321,14 +2081,6 @@ sha1 = "b4ac40648107fdcdcfae242f428bea8a14d4f1bf"; }; } - { - name = "es_abstract___es_abstract_1.17.6.tgz"; - path = fetchurl { - name = "es_abstract___es_abstract_1.17.6.tgz"; - url = "https://registry.yarnpkg.com/es-abstract/-/es-abstract-1.17.6.tgz"; - sha1 = "9142071707857b2cacc7b89ecb670316c3e2d52a"; - }; - } { name = "es_abstract___es_abstract_1.16.3.tgz"; path = fetchurl { @@ -2385,14 +2137,6 @@ sha1 = "1b61c0562190a8dff6ae3bb2cf0200ca130b86d4"; }; } - { - name = "eslint_config_esnext___eslint_config_esnext_4.1.0.tgz"; - path = fetchurl { - name = "eslint_config_esnext___eslint_config_esnext_4.1.0.tgz"; - url = "https://registry.yarnpkg.com/eslint-config-esnext/-/eslint-config-esnext-4.1.0.tgz"; - sha1 = "8695b858fcf40d28c1aedca181f700528c7b60c6"; - }; - } { name = "eslint_config_google___eslint_config_google_0.14.0.tgz"; path = fetchurl { @@ -2402,115 +2146,19 @@ }; } { - name = "eslint_config_matrix_org___eslint_config_matrix_org_0.1.2.tgz"; + name = "53000626a9256811f6b355de4eafeb5575bda7fc"; path = fetchurl { - name = "eslint_config_matrix_org___eslint_config_matrix_org_0.1.2.tgz"; - url = "https://registry.yarnpkg.com/eslint-config-matrix-org/-/eslint-config-matrix-org-0.1.2.tgz"; - sha1 = "b5d7e193e4f3fc5041905967b53c5ddd6924c793"; + name = "53000626a9256811f6b355de4eafeb5575bda7fc"; + url = "https://codeload.github.com/matrix-org/eslint-plugin-matrix-org/tar.gz/53000626a9256811f6b355de4eafeb5575bda7fc"; + sha1 = "12617a8105ab0ea2e7df2567928260a41ebffd58"; }; } { - name = "eslint_config_node___eslint_config_node_4.1.0.tgz"; + name = "eslint_scope___eslint_scope_5.1.1.tgz"; path = fetchurl { - name = "eslint_config_node___eslint_config_node_4.1.0.tgz"; - url = "https://registry.yarnpkg.com/eslint-config-node/-/eslint-config-node-4.1.0.tgz"; - sha1 = "fc1f13946d83766d6b83b0e67699e2071a56f417"; - }; - } - { - name = "eslint_config_react_native___eslint_config_react_native_4.1.0.tgz"; - path = fetchurl { - name = "eslint_config_react_native___eslint_config_react_native_4.1.0.tgz"; - url = "https://registry.yarnpkg.com/eslint-config-react-native/-/eslint-config-react-native-4.1.0.tgz"; - sha1 = "63e9401c7fac146804785f609e7df8f15b3e04eb"; - }; - } - { - name = "eslint_config_recommended___eslint_config_recommended_4.1.0.tgz"; - path = fetchurl { - name = "eslint_config_recommended___eslint_config_recommended_4.1.0.tgz"; - url = "https://registry.yarnpkg.com/eslint-config-recommended/-/eslint-config-recommended-4.1.0.tgz"; - sha1 = "1adff90e0716d439be471d192977f233de171a46"; - }; - } - { - name = "eslint_import_resolver_node___eslint_import_resolver_node_0.3.4.tgz"; - path = fetchurl { - name = "eslint_import_resolver_node___eslint_import_resolver_node_0.3.4.tgz"; - url = "https://registry.yarnpkg.com/eslint-import-resolver-node/-/eslint-import-resolver-node-0.3.4.tgz"; - sha1 = "85ffa81942c25012d8231096ddf679c03042c717"; - }; - } - { - name = "eslint_module_utils___eslint_module_utils_2.6.0.tgz"; - path = fetchurl { - name = "eslint_module_utils___eslint_module_utils_2.6.0.tgz"; - url = "https://registry.yarnpkg.com/eslint-module-utils/-/eslint-module-utils-2.6.0.tgz"; - sha1 = "579ebd094f56af7797d19c9866c9c9486629bfa6"; - }; - } - { - name = "eslint_plugin_babel___eslint_plugin_babel_5.3.1.tgz"; - path = fetchurl { - name = "eslint_plugin_babel___eslint_plugin_babel_5.3.1.tgz"; - url = "https://registry.yarnpkg.com/eslint-plugin-babel/-/eslint-plugin-babel-5.3.1.tgz"; - sha1 = "75a2413ffbf17e7be57458301c60291f2cfbf560"; - }; - } - { - name = "eslint_plugin_import___eslint_plugin_import_2.22.0.tgz"; - path = fetchurl { - name = "eslint_plugin_import___eslint_plugin_import_2.22.0.tgz"; - url = "https://registry.yarnpkg.com/eslint-plugin-import/-/eslint-plugin-import-2.22.0.tgz"; - sha1 = "92f7736fe1fde3e2de77623c838dd992ff5ffb7e"; - }; - } - { - name = "eslint_plugin_react_native_globals___eslint_plugin_react_native_globals_0.1.2.tgz"; - path = fetchurl { - name = "eslint_plugin_react_native_globals___eslint_plugin_react_native_globals_0.1.2.tgz"; - url = "https://registry.yarnpkg.com/eslint-plugin-react-native-globals/-/eslint-plugin-react-native-globals-0.1.2.tgz"; - sha1 = "ee1348bc2ceb912303ce6bdbd22e2f045ea86ea2"; - }; - } - { - name = "eslint_plugin_react_native___eslint_plugin_react_native_3.8.1.tgz"; - path = fetchurl { - name = "eslint_plugin_react_native___eslint_plugin_react_native_3.8.1.tgz"; - url = "https://registry.yarnpkg.com/eslint-plugin-react-native/-/eslint-plugin-react-native-3.8.1.tgz"; - sha1 = "92811e37191ecb0d29c0f0a0c9e5c943ee573821"; - }; - } - { - name = "eslint_plugin_react___eslint_plugin_react_7.20.3.tgz"; - path = fetchurl { - name = "eslint_plugin_react___eslint_plugin_react_7.20.3.tgz"; - url = "https://registry.yarnpkg.com/eslint-plugin-react/-/eslint-plugin-react-7.20.3.tgz"; - sha1 = "0590525e7eb83890ce71f73c2cf836284ad8c2f1"; - }; - } - { - name = "eslint_rule_composer___eslint_rule_composer_0.3.0.tgz"; - path = fetchurl { - name = "eslint_rule_composer___eslint_rule_composer_0.3.0.tgz"; - url = "https://registry.yarnpkg.com/eslint-rule-composer/-/eslint-rule-composer-0.3.0.tgz"; - sha1 = "79320c927b0c5c0d3d3d2b76c8b4a488f25bbaf9"; - }; - } - { - name = "eslint_scope___eslint_scope_5.1.0.tgz"; - path = fetchurl { - name = "eslint_scope___eslint_scope_5.1.0.tgz"; - url = "https://registry.yarnpkg.com/eslint-scope/-/eslint-scope-5.1.0.tgz"; - sha1 = "d0f971dfe59c69e0cada684b23d49dbf82600ce5"; - }; - } - { - name = "eslint_utils___eslint_utils_1.4.3.tgz"; - path = fetchurl { - name = "eslint_utils___eslint_utils_1.4.3.tgz"; - url = "https://registry.yarnpkg.com/eslint-utils/-/eslint-utils-1.4.3.tgz"; - sha1 = "74fec7c54d0776b6f67e0251040b5806564e981f"; + name = "eslint_scope___eslint_scope_5.1.1.tgz"; + url = "https://registry.yarnpkg.com/eslint-scope/-/eslint-scope-5.1.1.tgz"; + sha1 = "e786e59a66cb92b3f6c1fb0d508aab174848f48c"; }; } { @@ -2538,35 +2186,27 @@ }; } { - name = "eslint___eslint_7.3.1.tgz"; + name = "eslint_visitor_keys___eslint_visitor_keys_2.1.0.tgz"; path = fetchurl { - name = "eslint___eslint_7.3.1.tgz"; - url = "https://registry.yarnpkg.com/eslint/-/eslint-7.3.1.tgz"; - sha1 = "76392bd7e44468d046149ba128d1566c59acbe19"; + name = "eslint_visitor_keys___eslint_visitor_keys_2.1.0.tgz"; + url = "https://registry.yarnpkg.com/eslint-visitor-keys/-/eslint-visitor-keys-2.1.0.tgz"; + sha1 = "f65328259305927392c938ed44eb0a5c9b2bd303"; }; } { - name = "eslint___eslint_6.8.0.tgz"; + name = "eslint___eslint_7.18.0.tgz"; path = fetchurl { - name = "eslint___eslint_6.8.0.tgz"; - url = "https://registry.yarnpkg.com/eslint/-/eslint-6.8.0.tgz"; - sha1 = "62262d6729739f9275723824302fb227c8c93ffb"; + name = "eslint___eslint_7.18.0.tgz"; + url = "https://registry.yarnpkg.com/eslint/-/eslint-7.18.0.tgz"; + sha1 = "7fdcd2f3715a41fe6295a16234bd69aed2c75e67"; }; } { - name = "espree___espree_6.2.1.tgz"; + name = "espree___espree_7.3.1.tgz"; path = fetchurl { - name = "espree___espree_6.2.1.tgz"; - url = "https://registry.yarnpkg.com/espree/-/espree-6.2.1.tgz"; - sha1 = "77fc72e1fd744a2052c20f38a5b575832e82734a"; - }; - } - { - name = "espree___espree_7.2.0.tgz"; - path = fetchurl { - name = "espree___espree_7.2.0.tgz"; - url = "https://registry.yarnpkg.com/espree/-/espree-7.2.0.tgz"; - sha1 = "1c263d5b513dbad0ac30c4991b93ac354e948d69"; + name = "espree___espree_7.3.1.tgz"; + url = "https://registry.yarnpkg.com/espree/-/espree-7.3.1.tgz"; + sha1 = "f2df330b752c6f55019f8bd89b7660039c1bbbb6"; }; } { @@ -2577,14 +2217,6 @@ sha1 = "13b04cdb3e6c5d19df91ab6987a8695619b0aa71"; }; } - { - name = "esquery___esquery_1.0.1.tgz"; - path = fetchurl { - name = "esquery___esquery_1.0.1.tgz"; - url = "https://registry.yarnpkg.com/esquery/-/esquery-1.0.1.tgz"; - sha1 = "406c51658b1f5991a5f9b62b1dc25b00e3e5c708"; - }; - } { name = "esquery___esquery_1.3.1.tgz"; path = fetchurl { @@ -2594,11 +2226,11 @@ }; } { - name = "esrecurse___esrecurse_4.2.1.tgz"; + name = "esrecurse___esrecurse_4.3.0.tgz"; path = fetchurl { - name = "esrecurse___esrecurse_4.2.1.tgz"; - url = "https://registry.yarnpkg.com/esrecurse/-/esrecurse-4.2.1.tgz"; - sha1 = "007a3b9fdbc2b3bb87e4879ea19c92fdbd3942cf"; + name = "esrecurse___esrecurse_4.3.0.tgz"; + url = "https://registry.yarnpkg.com/esrecurse/-/esrecurse-4.3.0.tgz"; + sha1 = "7ad7964d679abb28bee72cec63758b1c5d2c9921"; }; } { @@ -2617,6 +2249,14 @@ sha1 = "374309d39fd935ae500e7b92e8a6b4c720e59642"; }; } + { + name = "estraverse___estraverse_5.2.0.tgz"; + path = fetchurl { + name = "estraverse___estraverse_5.2.0.tgz"; + url = "https://registry.yarnpkg.com/estraverse/-/estraverse-5.2.0.tgz"; + sha1 = "307df42547e6cc7324d3cf03c155d5cdb8c53880"; + }; + } { name = "esutils___esutils_2.0.3.tgz"; path = fetchurl { @@ -2665,14 +2305,6 @@ sha1 = "f8b1136b4071fbd8eb140aff858b1019ec2915fa"; }; } - { - name = "external_editor___external_editor_3.1.0.tgz"; - path = fetchurl { - name = "external_editor___external_editor_3.1.0.tgz"; - url = "https://registry.yarnpkg.com/external-editor/-/external-editor-3.1.0.tgz"; - sha1 = "cb03f740befae03ea4d283caed2741a83f335495"; - }; - } { name = "extsprintf___extsprintf_1.3.0.tgz"; path = fetchurl { @@ -2730,19 +2362,11 @@ }; } { - name = "figures___figures_3.2.0.tgz"; + name = "file_entry_cache___file_entry_cache_6.0.1.tgz"; path = fetchurl { - name = "figures___figures_3.2.0.tgz"; - url = "https://registry.yarnpkg.com/figures/-/figures-3.2.0.tgz"; - sha1 = "625c18bd293c604dc4a8ddb2febf0c88341746af"; - }; - } - { - name = "file_entry_cache___file_entry_cache_5.0.1.tgz"; - path = fetchurl { - name = "file_entry_cache___file_entry_cache_5.0.1.tgz"; - url = "https://registry.yarnpkg.com/file-entry-cache/-/file-entry-cache-5.0.1.tgz"; - sha1 = "ca0f6efa6dd3d561333fb14515065c2fafdf439c"; + name = "file_entry_cache___file_entry_cache_6.0.1.tgz"; + url = "https://registry.yarnpkg.com/file-entry-cache/-/file-entry-cache-6.0.1.tgz"; + sha1 = "211b2dd9659cb0394b073e7323ac3c933d522027"; }; } { @@ -2786,19 +2410,19 @@ }; } { - name = "flat_cache___flat_cache_2.0.1.tgz"; + name = "flat_cache___flat_cache_3.0.4.tgz"; path = fetchurl { - name = "flat_cache___flat_cache_2.0.1.tgz"; - url = "https://registry.yarnpkg.com/flat-cache/-/flat-cache-2.0.1.tgz"; - sha1 = "5d296d6f04bda44a4630a301413bdbc2ec085ec0"; + name = "flat_cache___flat_cache_3.0.4.tgz"; + url = "https://registry.yarnpkg.com/flat-cache/-/flat-cache-3.0.4.tgz"; + sha1 = "61b0338302b2fe9f957dcc32fc2a87f1c3048b11"; }; } { - name = "flatted___flatted_2.0.1.tgz"; + name = "flatted___flatted_3.1.1.tgz"; path = fetchurl { - name = "flatted___flatted_2.0.1.tgz"; - url = "https://registry.yarnpkg.com/flatted/-/flatted-2.0.1.tgz"; - sha1 = "69e57caa8f0eacbc281d2e2cb458d46fdb449e08"; + name = "flatted___flatted_3.1.1.tgz"; + url = "https://registry.yarnpkg.com/flatted/-/flatted-3.1.1.tgz"; + sha1 = "c4b489e80096d9df1dfc97c79871aea7c617c469"; }; } { @@ -2857,6 +2481,14 @@ sha1 = "6be0de9be998ce16af8afc24497b9ee9b7ccd9ad"; }; } + { + name = "fs_extra___fs_extra_10.0.0.tgz"; + path = fetchurl { + name = "fs_extra___fs_extra_10.0.0.tgz"; + url = "https://registry.yarnpkg.com/fs-extra/-/fs-extra-10.0.0.tgz"; + sha1 = "9ff61b655dde53fb34a82df84bb214ce802e17c1"; + }; + } { name = "fs_extra___fs_extra_8.1.0.tgz"; path = fetchurl { @@ -2865,14 +2497,6 @@ sha1 = "49d43c45a88cd9677668cb7be1b46efdb8d2e1c0"; }; } - { - name = "fs_extra___fs_extra_9.0.1.tgz"; - path = fetchurl { - name = "fs_extra___fs_extra_9.0.1.tgz"; - url = "https://registry.yarnpkg.com/fs-extra/-/fs-extra-9.0.1.tgz"; - sha1 = "910da0062437ba4c39fedd863f1675ccfefcb9fc"; - }; - } { name = "fs_extra___fs_extra_9.1.0.tgz"; path = fetchurl { @@ -2881,6 +2505,14 @@ sha1 = "5954460c764a8da2094ba3554bf839e6b9a7c86d"; }; } + { + name = "fs_extra___fs_extra_9.0.1.tgz"; + path = fetchurl { + name = "fs_extra___fs_extra_9.0.1.tgz"; + url = "https://registry.yarnpkg.com/fs-extra/-/fs-extra-9.0.1.tgz"; + sha1 = "910da0062437ba4c39fedd863f1675ccfefcb9fc"; + }; + } { name = "fs_minipass___fs_minipass_1.2.7.tgz"; path = fetchurl { @@ -3026,11 +2658,11 @@ }; } { - name = "glob_parent___glob_parent_5.1.1.tgz"; + name = "glob_parent___glob_parent_5.1.2.tgz"; path = fetchurl { - name = "glob_parent___glob_parent_5.1.1.tgz"; - url = "https://registry.yarnpkg.com/glob-parent/-/glob-parent-5.1.1.tgz"; - sha1 = "b6c1ef417c4e5663ea498f1c45afac6916bbc229"; + name = "glob_parent___glob_parent_5.1.2.tgz"; + url = "https://registry.yarnpkg.com/glob-parent/-/glob-parent-5.1.2.tgz"; + sha1 = "869832c58034fe68a4093c17dc15e8340d8401c4"; }; } { @@ -3041,6 +2673,14 @@ sha1 = "141f33b81a7c2492e125594307480c46679278a6"; }; } + { + name = "glob___glob_7.1.7.tgz"; + path = fetchurl { + name = "glob___glob_7.1.7.tgz"; + url = "https://registry.yarnpkg.com/glob/-/glob-7.1.7.tgz"; + sha1 = "3b193e9233f01d42d0b3f78294bbeeb418f94a90"; + }; + } { name = "global_dirs___global_dirs_0.1.1.tgz"; path = fetchurl { @@ -3105,6 +2745,14 @@ sha1 = "4a12ff1b60376ef09862c2093edd908328be8423"; }; } + { + name = "graceful_fs___graceful_fs_4.2.6.tgz"; + path = fetchurl { + name = "graceful_fs___graceful_fs_4.2.6.tgz"; + url = "https://registry.yarnpkg.com/graceful-fs/-/graceful-fs-4.2.6.tgz"; + sha1 = "ff040b2b0853b23c3d31027523706f1885d76bee"; + }; + } { name = "graceful_fs___graceful_fs_4.2.4.tgz"; path = fetchurl { @@ -3194,27 +2842,11 @@ }; } { - name = "hosted_git_info___hosted_git_info_2.8.5.tgz"; + name = "hosted_git_info___hosted_git_info_2.8.9.tgz"; path = fetchurl { - name = "hosted_git_info___hosted_git_info_2.8.5.tgz"; - url = "https://registry.yarnpkg.com/hosted-git-info/-/hosted-git-info-2.8.5.tgz"; - sha1 = "759cfcf2c4d156ade59b0b2dfabddc42a6b9c70c"; - }; - } - { - name = "hosted_git_info___hosted_git_info_2.8.8.tgz"; - path = fetchurl { - name = "hosted_git_info___hosted_git_info_2.8.8.tgz"; - url = "https://registry.yarnpkg.com/hosted-git-info/-/hosted-git-info-2.8.8.tgz"; - sha1 = "7539bd4bc1e0e0a895815a2e0262420b12858488"; - }; - } - { - name = "hosted_git_info___hosted_git_info_3.0.8.tgz"; - path = fetchurl { - name = "hosted_git_info___hosted_git_info_3.0.8.tgz"; - url = "https://registry.yarnpkg.com/hosted-git-info/-/hosted-git-info-3.0.8.tgz"; - sha1 = "6e35d4cc87af2c5f816e4cb9ce350ba87a3f370d"; + name = "hosted_git_info___hosted_git_info_2.8.9.tgz"; + url = "https://registry.yarnpkg.com/hosted-git-info/-/hosted-git-info-2.8.9.tgz"; + sha1 = "dffc0bf9a21c02209090f2aa69429e1414daf3f9"; }; } { @@ -3274,11 +2906,11 @@ }; } { - name = "iconv_corefoundation___iconv_corefoundation_1.1.5.tgz"; + name = "iconv_corefoundation___iconv_corefoundation_1.1.6.tgz"; path = fetchurl { - name = "iconv_corefoundation___iconv_corefoundation_1.1.5.tgz"; - url = "https://registry.yarnpkg.com/iconv-corefoundation/-/iconv-corefoundation-1.1.5.tgz"; - sha1 = "90596d444a579aeb109f5ca113f6bb665a41be2b"; + name = "iconv_corefoundation___iconv_corefoundation_1.1.6.tgz"; + url = "https://registry.yarnpkg.com/iconv-corefoundation/-/iconv-corefoundation-1.1.6.tgz"; + sha1 = "27c135470237f6f8d13462fa1f5eaf250523c29a"; }; } { @@ -3290,11 +2922,11 @@ }; } { - name = "iconv_lite___iconv_lite_0.6.2.tgz"; + name = "iconv_lite___iconv_lite_0.6.3.tgz"; path = fetchurl { - name = "iconv_lite___iconv_lite_0.6.2.tgz"; - url = "https://registry.yarnpkg.com/iconv-lite/-/iconv-lite-0.6.2.tgz"; - sha1 = "ce13d1875b0c3a674bd6a04b7f76b01b1b6ded01"; + name = "iconv_lite___iconv_lite_0.6.3.tgz"; + url = "https://registry.yarnpkg.com/iconv-lite/-/iconv-lite-0.6.3.tgz"; + sha1 = "a52f80bf38da1952eb5c681790719871a1a72501"; }; } { @@ -3369,6 +3001,14 @@ sha1 = "633ff618506e793af5ac91bf48b72677e15cbe66"; }; } + { + name = "import_fresh___import_fresh_3.3.0.tgz"; + path = fetchurl { + name = "import_fresh___import_fresh_3.3.0.tgz"; + url = "https://registry.yarnpkg.com/import-fresh/-/import-fresh-3.3.0.tgz"; + sha1 = "37162c25fcb9ebaa2e6e53d5b4d88ce17d9e0c2b"; + }; + } { name = "import_lazy___import_lazy_2.1.0.tgz"; path = fetchurl { @@ -3441,22 +3081,6 @@ sha1 = "45ffe2f610a8ca134f2bd1db5637b235070f6cbe"; }; } - { - name = "inquirer___inquirer_7.3.2.tgz"; - path = fetchurl { - name = "inquirer___inquirer_7.3.2.tgz"; - url = "https://registry.yarnpkg.com/inquirer/-/inquirer-7.3.2.tgz"; - sha1 = "25245d2e32dc9f33dbe26eeaada231daa66e9c7c"; - }; - } - { - name = "internal_slot___internal_slot_1.0.2.tgz"; - path = fetchurl { - name = "internal_slot___internal_slot_1.0.2.tgz"; - url = "https://registry.yarnpkg.com/internal-slot/-/internal-slot-1.0.2.tgz"; - sha1 = "9c2e9fb3cd8e5e4256c6f45fe310067fcfa378a3"; - }; - } { name = "invert_kv___invert_kv_1.0.0.tgz"; path = fetchurl { @@ -3497,14 +3121,6 @@ sha1 = "1e1adf219e1eeb684d691f9d6a05ff0d30a24d75"; }; } - { - name = "is_callable___is_callable_1.2.0.tgz"; - path = fetchurl { - name = "is_callable___is_callable_1.2.0.tgz"; - url = "https://registry.yarnpkg.com/is-callable/-/is-callable-1.2.0.tgz"; - sha1 = "83336560b54a38e35e3a2df7afd0454d691468bb"; - }; - } { name = "is_ci___is_ci_1.2.1.tgz"; path = fetchurl { @@ -3521,6 +3137,14 @@ sha1 = "6bc6334181810e04b5c22b3d589fdca55026404c"; }; } + { + name = "is_ci___is_ci_3.0.0.tgz"; + path = fetchurl { + name = "is_ci___is_ci_3.0.0.tgz"; + url = "https://registry.yarnpkg.com/is-ci/-/is-ci-3.0.0.tgz"; + sha1 = "c7e7be3c9d8eef7d0fa144390bd1e4b88dc4c994"; + }; + } { name = "is_cidr___is_cidr_3.1.0.tgz"; path = fetchurl { @@ -3529,14 +3153,6 @@ sha1 = "72e233d8e1c4cd1d3f11713fcce3eba7b0e3476f"; }; } - { - name = "is_core_module___is_core_module_2.2.0.tgz"; - path = fetchurl { - name = "is_core_module___is_core_module_2.2.0.tgz"; - url = "https://registry.yarnpkg.com/is-core-module/-/is-core-module-2.2.0.tgz"; - sha1 = "97037ef3d52224d85163f5597b2b63d9afed981a"; - }; - } { name = "is_date_object___is_date_object_1.0.1.tgz"; path = fetchurl { @@ -3673,14 +3289,6 @@ sha1 = "5517489b547091b0930e095654ced25ee97e9491"; }; } - { - name = "is_regex___is_regex_1.1.0.tgz"; - path = fetchurl { - name = "is_regex___is_regex_1.1.0.tgz"; - url = "https://registry.yarnpkg.com/is-regex/-/is-regex-1.1.0.tgz"; - sha1 = "ece38e389e490df0dc21caea2bd596f987f767ff"; - }; - } { name = "is_retry_allowed___is_retry_allowed_1.2.0.tgz"; path = fetchurl { @@ -3697,14 +3305,6 @@ sha1 = "12d4a3dd4e68e0b79ceb8dbc84173ae80d91ca44"; }; } - { - name = "is_string___is_string_1.0.5.tgz"; - path = fetchurl { - name = "is_string___is_string_1.0.5.tgz"; - url = "https://registry.yarnpkg.com/is-string/-/is-string-1.0.5.tgz"; - sha1 = "40493ed198ef3ff477b8c7f92f644ec82a5cd3a6"; - }; - } { name = "is_symbol___is_symbol_1.0.3.tgz"; path = fetchurl { @@ -3745,6 +3345,14 @@ sha1 = "bb935d48582cba168c06834957a54a3e07124f11"; }; } + { + name = "isbinaryfile___isbinaryfile_4.0.8.tgz"; + path = fetchurl { + name = "isbinaryfile___isbinaryfile_4.0.8.tgz"; + url = "https://registry.yarnpkg.com/isbinaryfile/-/isbinaryfile-4.0.8.tgz"; + sha1 = "5d34b94865bd4946633ecc78a026fc76c5b11fcf"; + }; + } { name = "isexe___isexe_2.0.0.tgz"; path = fetchurl { @@ -3761,14 +3369,6 @@ sha1 = "47e63f7af55afa6f92e1500e690eb8b8529c099a"; }; } - { - name = "istextorbinary___istextorbinary_5.12.0.tgz"; - path = fetchurl { - name = "istextorbinary___istextorbinary_5.12.0.tgz"; - url = "https://registry.yarnpkg.com/istextorbinary/-/istextorbinary-5.12.0.tgz"; - sha1 = "2f84777838668fdf524c305a2363d6057aaeec84"; - }; - } { name = "jake___jake_10.8.2.tgz"; path = fetchurl { @@ -3810,11 +3410,11 @@ }; } { - name = "js_yaml___js_yaml_4.0.0.tgz"; + name = "js_yaml___js_yaml_4.1.0.tgz"; path = fetchurl { - name = "js_yaml___js_yaml_4.0.0.tgz"; - url = "https://registry.yarnpkg.com/js-yaml/-/js-yaml-4.0.0.tgz"; - sha1 = "f426bc0ff4b4051926cd588c71113183409a121f"; + name = "js_yaml___js_yaml_4.1.0.tgz"; + url = "https://registry.yarnpkg.com/js-yaml/-/js-yaml-4.1.0.tgz"; + sha1 = "c1fb65f8f5017901cdd2c951864ba18458a10602"; }; } { @@ -3857,6 +3457,14 @@ sha1 = "69f6a87d9513ab8bb8fe63bdb0979c448e684660"; }; } + { + name = "json_schema_traverse___json_schema_traverse_1.0.0.tgz"; + path = fetchurl { + name = "json_schema_traverse___json_schema_traverse_1.0.0.tgz"; + url = "https://registry.yarnpkg.com/json-schema-traverse/-/json-schema-traverse-1.0.0.tgz"; + sha1 = "ae7bcb3656ab77a73ba5c49bf654f38e6b6860e2"; + }; + } { name = "json_schema_typed___json_schema_typed_7.0.3.tgz"; path = fetchurl { @@ -3890,19 +3498,11 @@ }; } { - name = "json5___json5_1.0.1.tgz"; + name = "json5___json5_2.2.0.tgz"; path = fetchurl { - name = "json5___json5_1.0.1.tgz"; - url = "https://registry.yarnpkg.com/json5/-/json5-1.0.1.tgz"; - sha1 = "779fb0018604fa854eacbf6252180d83543e3dbe"; - }; - } - { - name = "json5___json5_2.1.3.tgz"; - path = fetchurl { - name = "json5___json5_2.1.3.tgz"; - url = "https://registry.yarnpkg.com/json5/-/json5-2.1.3.tgz"; - sha1 = "c9b0f7fa9233bfe5807fe66fcf3a5617ed597d43"; + name = "json5___json5_2.2.0.tgz"; + url = "https://registry.yarnpkg.com/json5/-/json5-2.2.0.tgz"; + sha1 = "2dfefe720c6ba525d9ebd909950f0515316c89a3"; }; } { @@ -3937,14 +3537,6 @@ sha1 = "313e66bc1e5cc06e438bc1b7499c2e5c56acb6a2"; }; } - { - name = "jsx_ast_utils___jsx_ast_utils_2.4.1.tgz"; - path = fetchurl { - name = "jsx_ast_utils___jsx_ast_utils_2.4.1.tgz"; - url = "https://registry.yarnpkg.com/jsx-ast-utils/-/jsx-ast-utils-2.4.1.tgz"; - sha1 = "1114a4c1209481db06c690c2b4f488cc665f657e"; - }; - } { name = "jszip___jszip_3.5.0.tgz"; path = fetchurl { @@ -3993,6 +3585,14 @@ sha1 = "882636a7245c2cfe6e0a4e3ba6c5d68a137e5c65"; }; } + { + name = "lazy_val___lazy_val_1.0.5.tgz"; + path = fetchurl { + name = "lazy_val___lazy_val_1.0.5.tgz"; + url = "https://registry.yarnpkg.com/lazy-val/-/lazy-val-1.0.5.tgz"; + sha1 = "6cf3b9f5bc31cee7ee3e369c0832b7583dcd923d"; + }; + } { name = "lazystream___lazystream_1.0.0.tgz"; path = fetchurl { @@ -4009,14 +3609,6 @@ sha1 = "308accafa0bc483a3867b4b6f2b9506251d1b835"; }; } - { - name = "levn___levn_0.3.0.tgz"; - path = fetchurl { - name = "levn___levn_0.3.0.tgz"; - url = "https://registry.yarnpkg.com/levn/-/levn-0.3.0.tgz"; - sha1 = "3b09924edf9f083c0490fdd4c0bc4421e04764ee"; - }; - } { name = "levn___levn_0.4.1.tgz"; path = fetchurl { @@ -4225,6 +3817,14 @@ sha1 = "7c526a52d89b45c45cc690b88163be0497f550cb"; }; } + { + name = "lodash.truncate___lodash.truncate_4.4.2.tgz"; + path = fetchurl { + name = "lodash.truncate___lodash.truncate_4.4.2.tgz"; + url = "https://registry.yarnpkg.com/lodash.truncate/-/lodash.truncate-4.4.2.tgz"; + sha1 = "5a350da0b1113b837ecfffd5812cbe58d6eae193"; + }; + } { name = "lodash.union___lodash.union_4.6.0.tgz"; path = fetchurl { @@ -4250,27 +3850,11 @@ }; } { - name = "lodash___lodash_4.17.15.tgz"; + name = "lodash___lodash_4.17.21.tgz"; path = fetchurl { - name = "lodash___lodash_4.17.15.tgz"; - url = "https://registry.yarnpkg.com/lodash/-/lodash-4.17.15.tgz"; - sha1 = "b447f6670a0455bbfeedd11392eff330ea097548"; - }; - } - { - name = "lodash___lodash_4.17.19.tgz"; - path = fetchurl { - name = "lodash___lodash_4.17.19.tgz"; - url = "https://registry.yarnpkg.com/lodash/-/lodash-4.17.19.tgz"; - sha1 = "e48ddedbe30b3321783c5b4301fbd353bc1e4a4b"; - }; - } - { - name = "loose_envify___loose_envify_1.4.0.tgz"; - path = fetchurl { - name = "loose_envify___loose_envify_1.4.0.tgz"; - url = "https://registry.yarnpkg.com/loose-envify/-/loose-envify-1.4.0.tgz"; - sha1 = "71ee51fa7be4caec1a63839f7e682d8132d30caf"; + name = "lodash___lodash_4.17.21.tgz"; + url = "https://registry.yarnpkg.com/lodash/-/lodash-4.17.21.tgz"; + sha1 = "679591c564c3bffaae8454cf0b3df370c3d6911c"; }; } { @@ -4593,14 +4177,6 @@ sha1 = "e6fc4b3cc6c25caed7554bd613a5cf0bac8c31c0"; }; } - { - name = "nice_try___nice_try_1.0.5.tgz"; - path = fetchurl { - name = "nice_try___nice_try_1.0.5.tgz"; - url = "https://registry.yarnpkg.com/nice-try/-/nice-try-1.0.5.tgz"; - sha1 = "a3378a7696ce7d223e88fc9b764bd7ef1089e366"; - }; - } { name = "node_addon_api___node_addon_api_1.7.2.tgz"; path = fetchurl { @@ -4610,11 +4186,11 @@ }; } { - name = "node_fetch_npm___node_fetch_npm_2.0.2.tgz"; + name = "node_fetch_npm___node_fetch_npm_2.0.4.tgz"; path = fetchurl { - name = "node_fetch_npm___node_fetch_npm_2.0.2.tgz"; - url = "https://registry.yarnpkg.com/node-fetch-npm/-/node-fetch-npm-2.0.2.tgz"; - sha1 = "7258c9046182dca345b4208eda918daf33697ff7"; + name = "node_fetch_npm___node_fetch_npm_2.0.4.tgz"; + url = "https://registry.yarnpkg.com/node-fetch-npm/-/node-fetch-npm-2.0.4.tgz"; + sha1 = "6507d0e17a9ec0be3bec516958a497cec54bf5a4"; }; } { @@ -4665,14 +4241,6 @@ sha1 = "e66db1838b200c1dfc233225d12cb36520e234a8"; }; } - { - name = "normalize_package_data___normalize_package_data_3.0.2.tgz"; - path = fetchurl { - name = "normalize_package_data___normalize_package_data_3.0.2.tgz"; - url = "https://registry.yarnpkg.com/normalize-package-data/-/normalize-package-data-3.0.2.tgz"; - sha1 = "cae5c410ae2434f9a6c1baa65d5bc3b9366c8699"; - }; - } { name = "normalize_path___normalize_path_3.0.0.tgz"; path = fetchurl { @@ -4682,11 +4250,11 @@ }; } { - name = "normalize_url___normalize_url_4.5.0.tgz"; + name = "normalize_url___normalize_url_4.5.1.tgz"; path = fetchurl { - name = "normalize_url___normalize_url_4.5.0.tgz"; - url = "https://registry.yarnpkg.com/normalize-url/-/normalize-url-4.5.0.tgz"; - sha1 = "453354087e6ca96957bd8f5baf753f5982142129"; + name = "normalize_url___normalize_url_4.5.1.tgz"; + url = "https://registry.yarnpkg.com/normalize-url/-/normalize-url-4.5.1.tgz"; + sha1 = "0dd90cf1288ee1d1313b87081c9a5932ee48518a"; }; } { @@ -4793,14 +4361,6 @@ sha1 = "28ee94390e936df6d084263ee2061336a6a1581b"; }; } - { - name = "npm_registry_fetch___npm_registry_fetch_4.0.2.tgz"; - path = fetchurl { - name = "npm_registry_fetch___npm_registry_fetch_4.0.2.tgz"; - url = "https://registry.yarnpkg.com/npm-registry-fetch/-/npm-registry-fetch-4.0.2.tgz"; - sha1 = "2b1434f93ccbe6b6385f8e45f45db93e16921d7a"; - }; - } { name = "npm_registry_fetch___npm_registry_fetch_4.0.7.tgz"; path = fetchurl { @@ -4881,30 +4441,6 @@ sha1 = "1c47f272df277f3b1daf061677d9c82e2322c60e"; }; } - { - name = "object.assign___object.assign_4.1.0.tgz"; - path = fetchurl { - name = "object.assign___object.assign_4.1.0.tgz"; - url = "https://registry.yarnpkg.com/object.assign/-/object.assign-4.1.0.tgz"; - sha1 = "968bf1100d7956bb3ca086f006f846b3bc4008da"; - }; - } - { - name = "object.entries___object.entries_1.1.2.tgz"; - path = fetchurl { - name = "object.entries___object.entries_1.1.2.tgz"; - url = "https://registry.yarnpkg.com/object.entries/-/object.entries-1.1.2.tgz"; - sha1 = "bc73f00acb6b6bb16c203434b10f9a7e797d3add"; - }; - } - { - name = "object.fromentries___object.fromentries_2.0.2.tgz"; - path = fetchurl { - name = "object.fromentries___object.fromentries_2.0.2.tgz"; - url = "https://registry.yarnpkg.com/object.fromentries/-/object.fromentries-2.0.2.tgz"; - sha1 = "4a09c9b9bb3843dd0f89acdb517a794d4f355ac9"; - }; - } { name = "object.getownpropertydescriptors___object.getownpropertydescriptors_2.0.3.tgz"; path = fetchurl { @@ -4913,14 +4449,6 @@ sha1 = "8758c846f5b407adab0f236e0986f14b051caa16"; }; } - { - name = "object.values___object.values_1.1.1.tgz"; - path = fetchurl { - name = "object.values___object.values_1.1.1.tgz"; - url = "https://registry.yarnpkg.com/object.values/-/object.values-1.1.1.tgz"; - sha1 = "68a99ecde356b7e9295a3c5e0ce31dc8c953de5e"; - }; - } { name = "omggif___omggif_1.0.10.tgz"; path = fetchurl { @@ -4953,14 +4481,6 @@ sha1 = "5d37e1f35077b9dcac4301372271afdeb2a13598"; }; } - { - name = "optionator___optionator_0.8.3.tgz"; - path = fetchurl { - name = "optionator___optionator_0.8.3.tgz"; - url = "https://registry.yarnpkg.com/optionator/-/optionator-0.8.3.tgz"; - sha1 = "84fa1d036fe9d3c7e21d99884b601167ec8fb495"; - }; - } { name = "optionator___optionator_0.9.1.tgz"; path = fetchurl { @@ -5249,14 +4769,6 @@ sha1 = "8f47dcec5011b477b67db03c243bc1f3085e8854"; }; } - { - name = "pkg_dir___pkg_dir_2.0.0.tgz"; - path = fetchurl { - name = "pkg_dir___pkg_dir_2.0.0.tgz"; - url = "https://registry.yarnpkg.com/pkg-dir/-/pkg-dir-2.0.0.tgz"; - sha1 = "f6d5d1109e19d63edf428e0bd57e12777615334b"; - }; - } { name = "pkg_up___pkg_up_3.1.0.tgz"; path = fetchurl { @@ -5305,14 +4817,6 @@ sha1 = "debc6489d7a6e6b0e7611888cec880337d316396"; }; } - { - name = "prelude_ls___prelude_ls_1.1.2.tgz"; - path = fetchurl { - name = "prelude_ls___prelude_ls_1.1.2.tgz"; - url = "https://registry.yarnpkg.com/prelude-ls/-/prelude-ls-1.1.2.tgz"; - sha1 = "21932a549f5e52ffd9a827f570e04be62a97da54"; - }; - } { name = "prepend_http___prepend_http_1.0.4.tgz"; path = fetchurl { @@ -5385,14 +4889,6 @@ sha1 = "26a5d6ee8c7dee4cb12208305acfb93ba382a9ee"; }; } - { - name = "prop_types___prop_types_15.7.2.tgz"; - path = fetchurl { - name = "prop_types___prop_types_15.7.2.tgz"; - url = "https://registry.yarnpkg.com/prop-types/-/prop-types-15.7.2.tgz"; - sha1 = "52c41e75b8c87e72b9d9360e0206b99dcbffa6c5"; - }; - } { name = "proto_list___proto_list_1.2.4.tgz"; path = fetchurl { @@ -5529,14 +5025,6 @@ sha1 = "cd924bf5200a075b83c188cd6b9e211b7fc0d3ed"; }; } - { - name = "react_is___react_is_16.13.1.tgz"; - path = fetchurl { - name = "react_is___react_is_16.13.1.tgz"; - url = "https://registry.yarnpkg.com/react-is/-/react-is-16.13.1.tgz"; - sha1 = "789729a4dc36de2999dc156dd6c1d9c18cea56a4"; - }; - } { name = "read_cmd_shim___read_cmd_shim_1.0.5.tgz"; path = fetchurl { @@ -5546,11 +5034,11 @@ }; } { - name = "read_config_file___read_config_file_6.0.0.tgz"; + name = "read_config_file___read_config_file_6.2.0.tgz"; path = fetchurl { - name = "read_config_file___read_config_file_6.0.0.tgz"; - url = "https://registry.yarnpkg.com/read-config-file/-/read-config-file-6.0.0.tgz"; - sha1 = "224b5dca6a5bdc1fb19e63f89f342680efdb9299"; + name = "read_config_file___read_config_file_6.2.0.tgz"; + url = "https://registry.yarnpkg.com/read-config-file/-/read-config-file-6.2.0.tgz"; + sha1 = "71536072330bcd62ba814f91458b12add9fc7ade"; }; } { @@ -5649,22 +5137,6 @@ sha1 = "cac2dacc8a1ea675feaabaeb8ae833898ae46f55"; }; } - { - name = "regexp.prototype.flags___regexp.prototype.flags_1.3.0.tgz"; - path = fetchurl { - name = "regexp.prototype.flags___regexp.prototype.flags_1.3.0.tgz"; - url = "https://registry.yarnpkg.com/regexp.prototype.flags/-/regexp.prototype.flags-1.3.0.tgz"; - sha1 = "7aba89b3c13a64509dabcf3ca8d9fbb9bdf5cb75"; - }; - } - { - name = "regexpp___regexpp_2.0.1.tgz"; - path = fetchurl { - name = "regexpp___regexpp_2.0.1.tgz"; - url = "https://registry.yarnpkg.com/regexpp/-/regexpp-2.0.1.tgz"; - sha1 = "8d19d31cf632482b589049f8281f93dbcba4d07f"; - }; - } { name = "regexpp___regexpp_3.1.0.tgz"; path = fetchurl { @@ -5729,6 +5201,14 @@ sha1 = "8c64ad5fd30dab1c976e2344ffe7f792a6a6df42"; }; } + { + name = "require_from_string___require_from_string_2.0.2.tgz"; + path = fetchurl { + name = "require_from_string___require_from_string_2.0.2.tgz"; + url = "https://registry.yarnpkg.com/require-from-string/-/require-from-string-2.0.2.tgz"; + sha1 = "89a7fdd938261267318eafe14f9c32e598c36909"; + }; + } { name = "require_main_filename___require_main_filename_1.0.1.tgz"; path = fetchurl { @@ -5761,22 +5241,6 @@ sha1 = "be0aa4c06acd53083505abb35f4d66932ab35d16"; }; } - { - name = "resolve___resolve_1.17.0.tgz"; - path = fetchurl { - name = "resolve___resolve_1.17.0.tgz"; - url = "https://registry.yarnpkg.com/resolve/-/resolve-1.17.0.tgz"; - sha1 = "b25941b54968231cc2d1bb76a79cb7f2c0bf8444"; - }; - } - { - name = "resolve___resolve_1.20.0.tgz"; - path = fetchurl { - name = "resolve___resolve_1.20.0.tgz"; - url = "https://registry.yarnpkg.com/resolve/-/resolve-1.20.0.tgz"; - sha1 = "629a013fb3f70755d6f0b7935cc1c2c5378b1975"; - }; - } { name = "responselike___responselike_1.0.2.tgz"; path = fetchurl { @@ -5785,14 +5249,6 @@ sha1 = "918720ef3b631c5642be068f15ade5a46f4ba1e7"; }; } - { - name = "restore_cursor___restore_cursor_3.1.0.tgz"; - path = fetchurl { - name = "restore_cursor___restore_cursor_3.1.0.tgz"; - url = "https://registry.yarnpkg.com/restore-cursor/-/restore-cursor-3.1.0.tgz"; - sha1 = "39f67c54b3a7a58cea5236d95cf0034239631f7e"; - }; - } { name = "retry___retry_0.10.1.tgz"; path = fetchurl { @@ -5809,14 +5265,6 @@ sha1 = "1b42a6266a21f07421d1b0b54b7dc167b01c013b"; }; } - { - name = "rimraf___rimraf_2.6.3.tgz"; - path = fetchurl { - name = "rimraf___rimraf_2.6.3.tgz"; - url = "https://registry.yarnpkg.com/rimraf/-/rimraf-2.6.3.tgz"; - sha1 = "b2d104fe0d8fb27cf9e0a1cda8262dd3833c6cab"; - }; - } { name = "rimraf___rimraf_2.7.1.tgz"; path = fetchurl { @@ -5833,14 +5281,6 @@ sha1 = "f1a5402ba6220ad52cc1282bac1ae3aa49fd061a"; }; } - { - name = "run_async___run_async_2.4.1.tgz"; - path = fetchurl { - name = "run_async___run_async_2.4.1.tgz"; - url = "https://registry.yarnpkg.com/run-async/-/run-async-2.4.1.tgz"; - sha1 = "8440eccf99ea3e70bd409d49aab88e10c189a455"; - }; - } { name = "run_queue___run_queue_1.0.3.tgz"; path = fetchurl { @@ -5850,19 +5290,11 @@ }; } { - name = "rxjs___rxjs_6.6.0.tgz"; + name = "safe_buffer___safe_buffer_5.2.1.tgz"; path = fetchurl { - name = "rxjs___rxjs_6.6.0.tgz"; - url = "https://registry.yarnpkg.com/rxjs/-/rxjs-6.6.0.tgz"; - sha1 = "af2901eedf02e3a83ffa7f886240ff9018bbec84"; - }; - } - { - name = "safe_buffer___safe_buffer_5.2.0.tgz"; - path = fetchurl { - name = "safe_buffer___safe_buffer_5.2.0.tgz"; - url = "https://registry.yarnpkg.com/safe-buffer/-/safe-buffer-5.2.0.tgz"; - sha1 = "b74daec49b1148f88c64b68d49b1e815c1f2f519"; + name = "safe_buffer___safe_buffer_5.2.1.tgz"; + url = "https://registry.yarnpkg.com/safe-buffer/-/safe-buffer-5.2.1.tgz"; + sha1 = "1eaf9fa9bdb1fdd4ec75f58f9cdb4e6b7827eec6"; }; } { @@ -5873,14 +5305,6 @@ sha1 = "991ec69d296e0313747d59bdfd2b745c35f8828d"; }; } - { - name = "safe_buffer___safe_buffer_5.2.1.tgz"; - path = fetchurl { - name = "safe_buffer___safe_buffer_5.2.1.tgz"; - url = "https://registry.yarnpkg.com/safe-buffer/-/safe-buffer-5.2.1.tgz"; - sha1 = "1eaf9fa9bdb1fdd4ec75f58f9cdb4e6b7827eec6"; - }; - } { name = "safer_buffer___safer_buffer_2.1.2.tgz"; path = fetchurl { @@ -5953,6 +5377,14 @@ sha1 = "27aaa7d2e4ca76452f98d3add093a72c943edc97"; }; } + { + name = "semver___semver_7.3.5.tgz"; + path = fetchurl { + name = "semver___semver_7.3.5.tgz"; + url = "https://registry.yarnpkg.com/semver/-/semver-7.3.5.tgz"; + sha1 = "0b621c879348d8998e4b0e4be94b3f12e6018ef7"; + }; + } { name = "set_blocking___set_blocking_2.0.0.tgz"; path = fetchurl { @@ -6009,14 +5441,6 @@ sha1 = "ae16f1644d873ecad843b0307b143362d4c42172"; }; } - { - name = "side_channel___side_channel_1.0.2.tgz"; - path = fetchurl { - name = "side_channel___side_channel_1.0.2.tgz"; - url = "https://registry.yarnpkg.com/side-channel/-/side-channel-1.0.2.tgz"; - sha1 = "df5d1abadb4e4bf4af1cd8852bf132d2f7876947"; - }; - } { name = "signal_exit___signal_exit_3.0.2.tgz"; path = fetchurl { @@ -6034,11 +5458,11 @@ }; } { - name = "slice_ansi___slice_ansi_2.1.0.tgz"; + name = "slice_ansi___slice_ansi_4.0.0.tgz"; path = fetchurl { - name = "slice_ansi___slice_ansi_2.1.0.tgz"; - url = "https://registry.yarnpkg.com/slice-ansi/-/slice-ansi-2.1.0.tgz"; - sha1 = "cacd7693461a637a5788d92a7dd4fba068e81636"; + name = "slice_ansi___slice_ansi_4.0.0.tgz"; + url = "https://registry.yarnpkg.com/slice-ansi/-/slice-ansi-4.0.0.tgz"; + sha1 = "500e8dd0fd55b05815086255b3195adf2a45fe6b"; }; } { @@ -6257,22 +5681,6 @@ sha1 = "952182c46cc7b2c313d1596e623992bd163b72b5"; }; } - { - name = "string.prototype.matchall___string.prototype.matchall_4.0.2.tgz"; - path = fetchurl { - name = "string.prototype.matchall___string.prototype.matchall_4.0.2.tgz"; - url = "https://registry.yarnpkg.com/string.prototype.matchall/-/string.prototype.matchall-4.0.2.tgz"; - sha1 = "48bb510326fb9fdeb6a33ceaa81a6ea04ef7648e"; - }; - } - { - name = "string.prototype.trimend___string.prototype.trimend_1.0.1.tgz"; - path = fetchurl { - name = "string.prototype.trimend___string.prototype.trimend_1.0.1.tgz"; - url = "https://registry.yarnpkg.com/string.prototype.trimend/-/string.prototype.trimend-1.0.1.tgz"; - sha1 = "85812a6b847ac002270f5808146064c995fb6913"; - }; - } { name = "string.prototype.trimleft___string.prototype.trimleft_2.1.0.tgz"; path = fetchurl { @@ -6289,14 +5697,6 @@ sha1 = "669d164be9df9b6f7559fa8e89945b168a5a6c58"; }; } - { - name = "string.prototype.trimstart___string.prototype.trimstart_1.0.1.tgz"; - path = fetchurl { - name = "string.prototype.trimstart___string.prototype.trimstart_1.0.1.tgz"; - url = "https://registry.yarnpkg.com/string.prototype.trimstart/-/string.prototype.trimstart-1.0.1.tgz"; - sha1 = "14af6d9f34b053f7cfc89b72f8f2ee14b9039a54"; - }; - } { name = "string_decoder___string_decoder_1.3.0.tgz"; path = fetchurl { @@ -6410,11 +5810,11 @@ }; } { - name = "table___table_5.4.6.tgz"; + name = "table___table_6.7.1.tgz"; path = fetchurl { - name = "table___table_5.4.6.tgz"; - url = "https://registry.yarnpkg.com/table/-/table-5.4.6.tgz"; - sha1 = "1292d19500ce3f86053b05f0e8e7e4a3bb21079e"; + name = "table___table_6.7.1.tgz"; + url = "https://registry.yarnpkg.com/table/-/table-6.7.1.tgz"; + sha1 = "ee05592b7143831a8c94f3cee6aae4c1ccef33e2"; }; } { @@ -6442,11 +5842,11 @@ }; } { - name = "temp_file___temp_file_3.3.7.tgz"; + name = "temp_file___temp_file_3.4.0.tgz"; path = fetchurl { - name = "temp_file___temp_file_3.3.7.tgz"; - url = "https://registry.yarnpkg.com/temp-file/-/temp-file-3.3.7.tgz"; - sha1 = "686885d635f872748e384e871855958470aeb18a"; + name = "temp_file___temp_file_3.4.0.tgz"; + url = "https://registry.yarnpkg.com/temp-file/-/temp-file-3.4.0.tgz"; + sha1 = "766ea28911c683996c248ef1a20eea04d51652c7"; }; } { @@ -6465,14 +5865,6 @@ sha1 = "7f5ee823ae805207c00af2df4a84ec3fcfa570b4"; }; } - { - name = "textextensions___textextensions_5.12.0.tgz"; - path = fetchurl { - name = "textextensions___textextensions_5.12.0.tgz"; - url = "https://registry.yarnpkg.com/textextensions/-/textextensions-5.12.0.tgz"; - sha1 = "b908120b5c1bd4bb9eba41423d75b176011ab68a"; - }; - } { name = "through2___through2_2.0.5.tgz"; path = fetchurl { @@ -6529,6 +5921,14 @@ sha1 = "bb924d239029157b9bc1d506a6aa341f8b13e64c"; }; } + { + name = "tmp_promise___tmp_promise_3.0.2.tgz"; + path = fetchurl { + name = "tmp_promise___tmp_promise_3.0.2.tgz"; + url = "https://registry.yarnpkg.com/tmp-promise/-/tmp-promise-3.0.2.tgz"; + sha1 = "6e933782abff8b00c3119d63589ca1fb9caaa62a"; + }; + } { name = "tmp___tmp_0.1.0.tgz"; path = fetchurl { @@ -6538,11 +5938,11 @@ }; } { - name = "tmp___tmp_0.0.33.tgz"; + name = "tmp___tmp_0.2.1.tgz"; path = fetchurl { - name = "tmp___tmp_0.0.33.tgz"; - url = "https://registry.yarnpkg.com/tmp/-/tmp-0.0.33.tgz"; - sha1 = "6d34335889768d21b2bcda0aa277ced3b1bfadf9"; + name = "tmp___tmp_0.2.1.tgz"; + url = "https://registry.yarnpkg.com/tmp/-/tmp-0.2.1.tgz"; + sha1 = "8457fc3037dcf4719c251367a1af6500ee1ccf14"; }; } { @@ -6585,38 +5985,6 @@ sha1 = "405923909592d56f78a5818434b0b78489ca5f2b"; }; } - { - name = "tsconfig_paths___tsconfig_paths_3.9.0.tgz"; - path = fetchurl { - name = "tsconfig_paths___tsconfig_paths_3.9.0.tgz"; - url = "https://registry.yarnpkg.com/tsconfig-paths/-/tsconfig-paths-3.9.0.tgz"; - sha1 = "098547a6c4448807e8fcb8eae081064ee9a3c90b"; - }; - } - { - name = "tslib___tslib_1.13.0.tgz"; - path = fetchurl { - name = "tslib___tslib_1.13.0.tgz"; - url = "https://registry.yarnpkg.com/tslib/-/tslib-1.13.0.tgz"; - sha1 = "c881e13cc7015894ed914862d276436fa9a47043"; - }; - } - { - name = "tslib___tslib_1.10.0.tgz"; - path = fetchurl { - name = "tslib___tslib_1.10.0.tgz"; - url = "https://registry.yarnpkg.com/tslib/-/tslib-1.10.0.tgz"; - sha1 = "c3c19f95973fb0a62973fb09d90d961ee43e5c8a"; - }; - } - { - name = "tsutils___tsutils_3.17.1.tgz"; - path = fetchurl { - name = "tsutils___tsutils_3.17.1.tgz"; - url = "https://registry.yarnpkg.com/tsutils/-/tsutils-3.17.1.tgz"; - sha1 = "ed719917f11ca0dee586272b2ac49e015a2dd759"; - }; - } { name = "tunnel_agent___tunnel_agent_0.6.0.tgz"; path = fetchurl { @@ -6641,22 +6009,6 @@ sha1 = "07b8203bfa7056c0657050e3ccd2c37730bab8f1"; }; } - { - name = "type_check___type_check_0.3.2.tgz"; - path = fetchurl { - name = "type_check___type_check_0.3.2.tgz"; - url = "https://registry.yarnpkg.com/type-check/-/type-check-0.3.2.tgz"; - sha1 = "5884cab512cf1d355e3fb784f30804b2b520db72"; - }; - } - { - name = "type_fest___type_fest_0.11.0.tgz"; - path = fetchurl { - name = "type_fest___type_fest_0.11.0.tgz"; - url = "https://registry.yarnpkg.com/type-fest/-/type-fest-0.11.0.tgz"; - sha1 = "97abf0872310fed88a5c466b25681576145e33f1"; - }; - } { name = "type_fest___type_fest_0.16.0.tgz"; path = fetchurl { @@ -6697,14 +6049,6 @@ sha1 = "867ac74e3864187b1d3d47d996a78ec5c8830777"; }; } - { - name = "typescript___typescript_3.9.7.tgz"; - path = fetchurl { - name = "typescript___typescript_3.9.7.tgz"; - url = "https://registry.yarnpkg.com/typescript/-/typescript-3.9.7.tgz"; - sha1 = "98d600a5ebdc38f40cb277522f12dc800e9e25fa"; - }; - } { name = "uid_number___uid_number_0.0.6.tgz"; path = fetchurl { @@ -6945,22 +6289,6 @@ sha1 = "3a105ca17053af55d6e270c1f8288682e18da400"; }; } - { - name = "version_compare___version_compare_1.1.0.tgz"; - path = fetchurl { - name = "version_compare___version_compare_1.1.0.tgz"; - url = "https://registry.yarnpkg.com/version-compare/-/version-compare-1.1.0.tgz"; - sha1 = "7b3e67e7e6cec5c72d9c9e586f8854e419ade17c"; - }; - } - { - name = "version_range___version_range_1.1.0.tgz"; - path = fetchurl { - name = "version_range___version_range_1.1.0.tgz"; - url = "https://registry.yarnpkg.com/version-range/-/version-range-1.1.0.tgz"; - sha1 = "1c233064202ee742afc9d56e21da3b2e15260acf"; - }; - } { name = "walk___walk_2.3.14.tgz"; path = fetchurl { @@ -7097,14 +6425,6 @@ sha1 = "558328352e673b5bb192cf86500d60b230667d4b"; }; } - { - name = "write___write_1.0.3.tgz"; - path = fetchurl { - name = "write___write_1.0.3.tgz"; - url = "https://registry.yarnpkg.com/write/-/write-1.0.3.tgz"; - sha1 = "0800e14523b923a387e415123c865616aae0f5c3"; - }; - } { name = "xdg_basedir___xdg_basedir_3.0.0.tgz"; path = fetchurl { @@ -7186,19 +6506,19 @@ }; } { - name = "y18n___y18n_3.2.1.tgz"; + name = "y18n___y18n_3.2.2.tgz"; path = fetchurl { - name = "y18n___y18n_3.2.1.tgz"; - url = "https://registry.yarnpkg.com/y18n/-/y18n-3.2.1.tgz"; - sha1 = "6d15fba884c08679c0d77e88e7759e811e07fa41"; + name = "y18n___y18n_3.2.2.tgz"; + url = "https://registry.yarnpkg.com/y18n/-/y18n-3.2.2.tgz"; + sha1 = "85c901bd6470ce71fc4bb723ad209b70f7f28696"; }; } { - name = "y18n___y18n_4.0.0.tgz"; + name = "y18n___y18n_4.0.3.tgz"; path = fetchurl { - name = "y18n___y18n_4.0.0.tgz"; - url = "https://registry.yarnpkg.com/y18n/-/y18n-4.0.0.tgz"; - sha1 = "95ef94f85ecc81d007c264e190a120f0a3c8566b"; + name = "y18n___y18n_4.0.3.tgz"; + url = "https://registry.yarnpkg.com/y18n/-/y18n-4.0.3.tgz"; + sha1 = "b5f259c82cd6e336921efd7bfd8bf560de9eeedf"; }; } { @@ -7274,11 +6594,11 @@ }; } { - name = "yargs___yargs_16.2.0.tgz"; + name = "yargs___yargs_17.0.1.tgz"; path = fetchurl { - name = "yargs___yargs_16.2.0.tgz"; - url = "https://registry.yarnpkg.com/yargs/-/yargs-16.2.0.tgz"; - sha1 = "1c82bf0f6b6a66eafce7ef30e376f49a12477f66"; + name = "yargs___yargs_17.0.1.tgz"; + url = "https://registry.yarnpkg.com/yargs/-/yargs-17.0.1.tgz"; + sha1 = "6a1ced4ed5ee0b388010ba9fd67af83b9362e0bb"; }; } { diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop.nix index 6642d4ca02..f8f4d31d6e 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-desktop.nix @@ -8,12 +8,12 @@ let executableName = "element-desktop"; - version = "1.7.29"; + version = "1.7.31"; src = fetchFromGitHub { owner = "vector-im"; repo = "element-desktop"; rev = "v${version}"; - sha256 = "sha256-nCtgVVOdjZ/OK8gMInBbNeuJadchDYUO2UQxEmcOm4s="; + sha256 = "14vyqzf69g4n3i7qjm1pgq2kwym6cira0jwvirzdrwxkfsl0dsq6"; }; in mkYarnPackage rec { name = "element-desktop-${version}"; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-web.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-web.nix index 92f9fa0ab1..d9aec35b04 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-web.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/element/element-web.nix @@ -12,11 +12,11 @@ let in stdenv.mkDerivation rec { pname = "element-web"; - version = "1.7.29"; + version = "1.7.31"; src = fetchurl { url = "https://github.com/vector-im/element-web/releases/download/v${version}/element-v${version}.tar.gz"; - sha256 = "sha256-wFC0B9v0V3JK9sLKH7GviVO/JEjePOJ06PwRq/MVqDE="; + sha256 = "1p0vg5bkri7qiqv5yic56hjjbb5zvhvyzsm5zi7fx3yb7zdxmr3f"; }; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/franz/generic.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/franz/generic.nix index 6fac3657c7..d63318ecfa 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/franz/generic.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/franz/generic.nix @@ -17,7 +17,7 @@ , dbus , nss , nspr -, alsaLib +, alsa-lib , cups , expat , udev @@ -63,7 +63,7 @@ stdenv.mkDerivation rec { gnome2.GConf nss nspr - alsaLib + alsa-lib cups expat stdenv.cc.cc diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/gitter/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/gitter/default.nix index 6fe0e3b13b..854cc18a47 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/gitter/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/gitter/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, alsaLib, atk, at-spi2-core, cairo, cups, dbus, dpkg, expat, fetchurl +{ lib, stdenv, alsa-lib, atk, at-spi2-core, cairo, cups, dbus, dpkg, expat, fetchurl , fontconfig, freetype, gdk-pixbuf, glib, gnome2, gtk3, libdrm, libX11 , libXScrnSaver, libXcomposite, libXcursor, libXdamage, libXext, libXfixes , libXi, libXrandr, libXrender, libXtst, libappindicator-gtk3, libcxx @@ -7,7 +7,7 @@ let gitterDirectorySuffix = "opt/gitter"; libPath = lib.makeLibraryPath [ - alsaLib + alsa-lib atk at-spi2-core cairo diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/go-neb/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/go-neb/default.nix index 04418dc64f..f1e335133d 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/go-neb/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/go-neb/default.nix @@ -1,20 +1,20 @@ -{ lib, buildGoModule, fetchFromGitHub, nixosTests }: +{ lib, buildGoModule, fetchFromGitHub, nixosTests, olm }: buildGoModule { pname = "go-neb"; - version = "unstable-2020-04-09"; + version = "unstable-2021-03-24"; src = fetchFromGitHub { owner = "matrix-org"; repo = "go-neb"; - rev = "1e297c50ad2938e511a3c86f4b190fd3fc3559d6"; - sha256 = "1azwy4s4kmypps1fjbz76flpi1b7sjzjj4qwx94cry0hn3qfnrc6"; + rev = "b6edd50d6e33de3bcdb35055fa6c5f0157f45321"; + sha256 = "sha256-wFqkN4C0rWzWxa6+/LiHMMS8i/g3Q57f5z4cG2XZQzs="; }; subPackages = [ "." ]; - patches = [ ./go-mod.patch ]; + buildInputs = [ olm ]; - vendorSha256 = "1k3980yf6zl00dkd1djwhm2f9nnffzrsbs3kq3alpw2gm0aln739"; + vendorSha256 = "sha256-sWrLWjODf25Z8QqCDg4KyVWmTc3PRiYpRL88yxK0j/M"; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/go-neb/go-mod.patch b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/go-neb/go-mod.patch deleted file mode 100644 index 1c725652d4..0000000000 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/go-neb/go-mod.patch +++ /dev/null @@ -1,50 +0,0 @@ -diff --git a/go.mod b/go.mod -index 8ed4e68..83526e7 100644 ---- a/go.mod -+++ b/go.mod -@@ -4,24 +4,15 @@ go 1.14 - - require ( - github.com/PuerkitoBio/goquery v1.5.1 // indirect -- github.com/alecthomas/template v0.0.0-20190718012654-fb15b899a751 // indirect -- github.com/alecthomas/units v0.0.0-20190717042225-c3de453c63f4 // indirect - github.com/andygrunwald/go-jira v1.11.0 - github.com/beorn7/perks v1.0.1 // indirect -- github.com/cespare/xxhash/v2 v2.1.1 // indirect - github.com/dghubble/oauth1 v0.6.0 - github.com/die-net/lrucache v0.0.0-20190707192454-883874fe3947 -- github.com/go-kit/kit v0.9.0 // indirect -- github.com/go-logfmt/logfmt v0.4.0 // indirect -- github.com/go-stack/stack v1.8.0 // indirect -- github.com/gogo/protobuf v1.1.1 // indirect - github.com/golang/protobuf v1.3.2 // indirect - github.com/google/go-cmp v0.4.0 // indirect - github.com/google/go-github v2.0.1-0.20160719063544-b5e5babef39c+incompatible - github.com/gregjones/httpcache v0.0.0-20190611155906-901d90724c79 - github.com/jaytaylor/html2text v0.0.0-20200220170450-61d9dc4d7195 -- github.com/json-iterator/go v1.1.9 // indirect -- github.com/julienschmidt/httprouter v1.2.0 // indirect - github.com/kr/pretty v0.1.0 // indirect - github.com/lib/pq v1.3.0 - github.com/matrix-org/dugong v0.0.0-20180820122854-51a565b5666b -@@ -32,9 +23,6 @@ require ( - github.com/matttproud/golang_protobuf_extensions v1.0.1 // indirect - github.com/mmcdole/gofeed v1.0.0-beta2 - github.com/mmcdole/goxpp v0.0.0-20181012175147-0068e33feabf // indirect -- github.com/modern-go/concurrent v0.0.0-20180306012644-bacd9c7ef1dd // indirect -- github.com/modern-go/reflect2 v1.0.1 // indirect -- github.com/mwitkow/go-conntrack v0.0.0-20161129095857-cc309e4a2223 // indirect - github.com/olekukonko/tablewriter v0.0.4 // indirect - github.com/pkg/errors v0.8.1 // indirect - github.com/prometheus/client_golang v0.8.1-0.20160916180340-5636dc67ae77 -@@ -47,10 +35,7 @@ require ( - github.com/stretchr/testify v1.4.0 // indirect - golang.org/x/net v0.0.0-20200301022130-244492dfa37a - golang.org/x/oauth2 v0.0.0-20200107190931-bf48bf16ab8d -- golang.org/x/sync v0.0.0-20190911185100-cd5d95a43a6e // indirect - golang.org/x/sys v0.0.0-20200122134326-e047566fdf82 // indirect -- golang.org/x/tools v0.0.0-20200311090712-aafaee8bce8c // indirect -- gopkg.in/alecthomas/kingpin.v2 v2.2.6 // indirect - gopkg.in/check.v1 v1.0.0-20190902080502-41f04d3bba15 // indirect - gopkg.in/yaml.v2 v2.2.8 - ) diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/hipchat/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/hipchat/default.nix index cbbe74481c..6a677c9e0d 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/hipchat/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/hipchat/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, xorg, freetype, fontconfig, openssl, glib, nss, nspr, expat -, alsaLib, dbus, zlib, libxml2, libxslt, makeWrapper, xkeyboard_config, systemd +, alsa-lib, dbus, zlib, libxml2, libxslt, makeWrapper, xkeyboard_config, systemd , libGL, xcbutilkeysyms, xdg-utils, libtool }: let @@ -28,7 +28,7 @@ let nss nspr dbus - alsaLib + alsa-lib zlib libtool libxml2 diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/jitsi-meet-electron/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/jitsi-meet-electron/default.nix index 27bc38cf6c..83f261cd48 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/jitsi-meet-electron/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/jitsi-meet-electron/default.nix @@ -11,11 +11,11 @@ let in stdenv.mkDerivation rec { pname = "jitsi-meet-electron"; - version = "2.8.6"; + version = "2.8.7"; src = fetchurl { url = "https://github.com/jitsi/jitsi-meet-electron/releases/download/v${version}/jitsi-meet-x86_64.AppImage"; - sha256 = "sha256-kLX8SZERlyNVSvszkV/fkQh/Z/Z20PAPJ9eug2oKlqI="; + sha256 = "sha256-2VjYXDTb+u3gVM4FPwFzwyUj3O1t7fHpOrNU5Z+Hq2E="; name = "${pname}-${version}.AppImage"; }; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/jitsi/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/jitsi/default.nix index 5fa5c2a286..e2ace1a5d3 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/jitsi/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/jitsi/default.nix @@ -1,6 +1,6 @@ { stdenv, lib, fetchurl, makeDesktopItem, unzip, ant, jdk8 # Optional, Jitsi still runs without, but you may pass null: -, alsaLib, dbus, gtk2, libpulseaudio, openssl, xorg +, alsa-lib, dbus, gtk2, libpulseaudio, openssl, xorg }: let jdk = jdk8; in @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { libPath = lib.makeLibraryPath ([ stdenv.cc.cc # For libstdc++. - alsaLib + alsa-lib dbus gtk2 libpulseaudio diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/kaidan/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/kaidan/default.nix new file mode 100644 index 0000000000..74449ae705 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/kaidan/default.nix @@ -0,0 +1,62 @@ +{ mkDerivation +, lib +, fetchFromGitLab +, cmake +, extra-cmake-modules +, pkg-config +, qtquickcontrols2 +, qtmultimedia +, qtlocation +, qqc2-desktop-style +, kirigami2 +, knotifications +, zxing-cpp +, qxmpp +, gst_all_1 +}: + +mkDerivation rec { + pname = "kaidan"; + version = "0.8.0"; + + src = fetchFromGitLab { + domain = "invent.kde.org"; + owner = "network"; + repo = pname; + rev = "v${version}"; + sha256 = "070njci5zyzahmz3nqyp660chxnqx1mxp31w17syfllvrw403qmg"; + }; + + nativeBuildInputs = [ cmake extra-cmake-modules pkg-config ]; + + buildInputs = with gst_all_1; [ + qtquickcontrols2 + qtmultimedia + qtlocation + qqc2-desktop-style + kirigami2 + knotifications + zxing-cpp + qxmpp + gstreamer + gst-plugins-bad + gst-plugins-base + gst-plugins-good + ]; + postInstall = '' + qtWrapperArgs+=(--prefix GST_PLUGIN_SYSTEM_PATH_1_0 : "$GST_PLUGIN_SYSTEM_PATH_1_0") + ''; + + meta = with lib; { + description = "User-friendly and modern chat app, using XMPP"; + homepage = "https://www.kaidan.im"; + license = with licenses; [ + gpl3Plus + mit + asl20 + cc-by-sa-40 + ]; + maintainers = with maintainers; [ astro ]; + platforms = with platforms; linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/kdeltachat/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/kdeltachat/default.nix index dfd4f266f8..89154ad939 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/kdeltachat/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/kdeltachat/default.nix @@ -13,13 +13,13 @@ mkDerivation rec { pname = "kdeltachat"; - version = "unstable-2021-05-31"; + version = "unstable-2021-06-14"; src = fetchFromSourcehut { owner = "~link2xt"; repo = "kdeltachat"; - rev = "318ae67c17f3e64532bad23c2a61a93446db553d"; - sha256 = "1qy0hlp0r91sqn26ai9isxw4rl8kcmmb10a2p9yqynhm8py3dfn4"; + rev = "25da4228768e260ea9f67d5aa10558e7cf9cf7ee"; + sha256 = "17igh34cbd0w5mzra4k779nxc5s8hk6sj25h308w079y0b21lf7w"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/mattermost-desktop/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/mattermost-desktop/default.nix index 058a96ea62..5b14fba5b4 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/mattermost-desktop/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/mattermost-desktop/default.nix @@ -1,12 +1,12 @@ { lib, stdenv, fetchurl, gnome2, gtk3, pango, atk, cairo, gdk-pixbuf, glib, freetype, fontconfig, dbus, libX11, xorg, libXi, libXcursor, libXdamage, libXrandr, libXcomposite, libXext, libXfixes, libXrender, libXtst, -libXScrnSaver, nss, nspr, alsaLib, cups, expat, udev, wrapGAppsHook, +libXScrnSaver, nss, nspr, alsa-lib, cups, expat, udev, wrapGAppsHook, hicolor-icon-theme, libuuid, at-spi2-core, at-spi2-atk }: let rpath = lib.makeLibraryPath [ - alsaLib + alsa-lib at-spi2-atk at-spi2-core atk diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/mikutter/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/mikutter/default.nix index 111a3ed091..c20ec46f26 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/mikutter/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/mikutter/default.nix @@ -2,7 +2,7 @@ , stdenv , fetchurl , bundlerEnv -, alsaUtils +, alsa-utils , atk , copyDesktopItems , gobject-introspection @@ -87,11 +87,11 @@ with mikutterPaths; stdenv.mkDerivation rec { libnotify which # some plugins use it at runtime wrappedRuby - ] ++ lib.optionals stdenv.isLinux [ alsaUtils ]; + ] ++ lib.optionals stdenv.isLinux [ alsa-utils ]; scriptPath = lib.makeBinPath ( [ wrappedRuby libnotify which ] - ++ lib.optionals stdenv.isLinux [ alsaUtils ] + ++ lib.optionals stdenv.isLinux [ alsa-utils ] ); postUnpack = '' diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/ring-daemon/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/ring-daemon/default.nix index bad54f455b..94e0dc9c8c 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/ring-daemon/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/ring-daemon/default.nix @@ -7,7 +7,7 @@ , libtool , pjsip , libyamlcpp -, alsaLib +, alsa-lib , libpulseaudio , libsamplerate , libsndfile @@ -95,7 +95,7 @@ stdenv.mkDerivation { buildInputs = [ pjsip' libyamlcpp - alsaLib + alsa-lib libpulseaudio libsamplerate libsndfile diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/ripcord/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/ripcord/default.nix index 6d6e70ff26..dbcd447d15 100755 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/ripcord/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/ripcord/default.nix @@ -1,7 +1,7 @@ { lib, mkDerivation, fetchurl, makeFontsConf, appimageTools , qtbase, qtsvg, qtmultimedia, qtwebsockets, qtimageformats , autoPatchelfHook, desktop-file-utils, imagemagick -, twemoji-color-font, xorg, libsodium, libopus, libGL, alsaLib }: +, twemoji-color-font, xorg, libsodium, libopus, libGL, alsa-lib }: mkDerivation rec { pname = "ripcord"; @@ -19,7 +19,7 @@ mkDerivation rec { }; nativeBuildInputs = [ autoPatchelfHook desktop-file-utils imagemagick ]; - buildInputs = [ libsodium libopus libGL alsaLib ] + buildInputs = [ libsodium libopus libGL alsa-lib ] ++ [ qtbase qtsvg qtmultimedia qtwebsockets qtimageformats ] ++ (with xorg; [ libX11 libXScrnSaver libXcursor xkeyboardconfig ]); diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/seren/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/seren/default.nix index 63cefbd2ff..ed02def3eb 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/seren/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/seren/default.nix @@ -1,7 +1,7 @@ { lib , stdenv , fetchurl -, alsaLib +, alsa-lib , libopus , libogg , gmp @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { pname = "seren"; version = "0.0.21"; - buildInputs = [ alsaLib libopus libogg gmp ncurses ]; + buildInputs = [ alsa-lib libopus libogg gmp ncurses ]; src = fetchurl { url = "http://holdenc.altervista.org/seren/downloads/${pname}-${version}.tar.gz"; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix index a512e3a004..2189d1b0ba 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix @@ -1,7 +1,7 @@ { stdenv, lib, fetchurl, autoPatchelfHook, dpkg, wrapGAppsHook, nixosTests , gnome2, gtk3, atk, at-spi2-atk, cairo, pango, gdk-pixbuf, glib, freetype, fontconfig , dbus, libX11, xorg, libXi, libXcursor, libXdamage, libXrandr, libXcomposite -, libXext, libXfixes, libXrender, libXtst, libXScrnSaver, nss, nspr, alsaLib +, libXext, libXfixes, libXrender, libXtst, libXScrnSaver, nss, nspr, alsa-lib , cups, expat, libuuid, at-spi2-core, libappindicator-gtk3, mesa # Runtime dependencies: , systemd, libnotify, libdbusmenu, libpulseaudio @@ -28,7 +28,7 @@ let else ""); in stdenv.mkDerivation rec { pname = "signal-desktop"; - version = "5.4.0"; # Please backport all updates to the stable channel. + version = "5.6.2"; # Please backport all updates to the stable channel. # All releases have a limited lifetime and "expire" 90 days after the release. # When releases "expire" the application becomes unusable until an update is # applied. The expiration date for the current release can be extracted with: @@ -38,7 +38,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "https://updates.signal.org/desktop/apt/pool/main/s/signal-desktop/signal-desktop_${version}_amd64.deb"; - sha256 = "046xy033ars70ay5ryj39i5053py00xj92ajdg212pamq415z1zb"; + sha256 = "0cdzww741l4s95n5gq5zx5l3zvxinxbqa9y6wf8wjq7rzn6bwqx3"; }; nativeBuildInputs = [ @@ -48,7 +48,7 @@ in stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib at-spi2-atk at-spi2-core atk diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/signald/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/signald/default.nix index 593e63d32f..a26fbed2a0 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/signald/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/signald/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, fetchgit, jre, coreutils, gradle_6, git, perl +{ lib, stdenv, fetchurl, fetchgit, jre_headless, coreutils, gradle_6, git, perl , makeWrapper }: let @@ -52,20 +52,28 @@ in stdenv.mkDerivation rec { inherit pname src version postPatch patches; buildPhase = '' + runHook preBuild + export GRADLE_USER_HOME=$(mktemp -d) # Use the local packages from -deps sed -i -e 's|mavenCentral()|mavenLocal(); maven { url uri("${deps}") }|' build.gradle gradle --offline --no-daemon distTar + + runHook postBuild ''; installPhase = '' + runHook preInstall + mkdir -p $out tar xvf ./build/distributions/signald.tar --strip-components=1 --directory $out/ wrapProgram $out/bin/signald \ --prefix PATH : ${lib.makeBinPath [ coreutils ]} \ - --set JAVA_HOME "${jre}" + --set JAVA_HOME "${jre_headless}" + + runHook postInstall ''; nativeBuildInputs = [ git gradle_6 makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix index 8caafdd576..4eb5362562 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/skypeforlinux/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, dpkg -, alsaLib, atk, cairo, cups, curl, dbus, expat, fontconfig, freetype, gdk-pixbuf, glib, glibc, gnome2, gnome +, alsa-lib, atk, cairo, cups, curl, dbus, expat, fontconfig, freetype, gdk-pixbuf, glib, glibc, gnome2, gnome , gtk3, libappindicator-gtk3, libnotify, libpulseaudio, libsecret, libv4l, nspr, nss, pango, systemd, wrapGAppsHook, xorg , at-spi2-atk, libuuid, at-spi2-core, libdrm, mesa, libxkbcommon }: @@ -10,7 +10,7 @@ let version = "8.69.0.77"; rpath = lib.makeLibraryPath [ - alsaLib + alsa-lib atk at-spi2-atk at-spi2-core diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/slack/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/slack/default.nix index 4db4580f58..39cff6de85 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/slack/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/slack/default.nix @@ -1,10 +1,11 @@ -{ lib, stdenv +{ lib +, stdenv , fetchurl , dpkg , undmg , makeWrapper , nodePackages -, alsaLib +, alsa-lib , at-spi2-atk , at-spi2-core , atk @@ -19,6 +20,7 @@ , glib , gnome2 , gtk3 +, libGL , libappindicator-gtk3 , libdrm , libnotify @@ -42,29 +44,31 @@ let pname = "slack"; - x86_64-darwin-version = "4.16.0"; - x86_64-darwin-sha256 = "078f49sgazfa99vn0yyacfya3jl2vhqz7kgxh0qp56b66pnzwbxz"; + x86_64-darwin-version = "4.17.0"; + x86_64-darwin-sha256 = "0r5cafxw73qnn14ljprn7w8bfn67zbkcniq60k9pf2zbqgb4cyj9"; - x86_64-linux-version = "4.16.0"; - x86_64-linux-sha256 = "0dj5k7r044mibis0zymh6wryhbw2fzsch30nddfrnn6ij89hhirv"; + x86_64-linux-version = "4.17.0"; + x86_64-linux-sha256 = "07ccms58pq27ilkyhcf6cgwb7qrddwil5kgy8yv95ljikqzi5rxi"; version = { x86_64-darwin = x86_64-darwin-version; x86_64-linux = x86_64-linux-version; }.${system} or throwSystem; - src = let - base = "https://downloads.slack-edge.com"; - in { - x86_64-darwin = fetchurl { - url = "${base}/releases/macos/${version}/prod/x64/Slack-${version}-macOS.dmg"; - sha256 = x86_64-darwin-sha256; - }; - x86_64-linux = fetchurl { - url = "${base}/linux_releases/slack-desktop-${version}-amd64.deb"; - sha256 = x86_64-linux-sha256; - }; - }.${system} or throwSystem; + src = + let + base = "https://downloads.slack-edge.com"; + in + { + x86_64-darwin = fetchurl { + url = "${base}/releases/macos/${version}/prod/x64/Slack-${version}-macOS.dmg"; + sha256 = x86_64-darwin-sha256; + }; + x86_64-linux = fetchurl { + url = "${base}/linux_releases/slack-desktop-${version}-amd64.deb"; + sha256 = x86_64-linux-sha256; + }; + }.${system} or throwSystem; meta = with lib; { description = "Desktop client for Slack"; @@ -80,7 +84,7 @@ let passthru.updateScript = ./update.sh; rpath = lib.makeLibraryPath [ - alsaLib + alsa-lib at-spi2-atk at-spi2-core atk @@ -95,6 +99,7 @@ let glib gnome2.GConf gtk3 + libGL libappindicator-gtk3 libdrm libnotify @@ -118,13 +123,13 @@ let xorg.libXi xorg.libXrandr xorg.libXrender - xorg.libxshmfence xorg.libXtst xorg.libxkbfile + xorg.libxshmfence ] + ":${stdenv.cc.cc.lib}/lib64"; buildInputs = [ - gtk3 # needed for GSETTINGS_SCHEMAS_PATH + gtk3 # needed for GSETTINGS_SCHEMAS_PATH ]; nativeBuildInputs = [ dpkg makeWrapper nodePackages.asar ]; @@ -153,7 +158,7 @@ let rm $out/bin/slack makeWrapper $out/lib/slack/slack $out/bin/slack \ --prefix XDG_DATA_DIRS : $GSETTINGS_SCHEMAS_PATH \ - --prefix PATH : ${xdg-utils}/bin + --prefix PATH : ${lib.makeBinPath [xdg-utils]} # Fix the desktop link substituteInPlace $out/share/applications/slack.desktop \ @@ -177,6 +182,7 @@ let /usr/bin/defaults write com.tinyspeck.slackmacgap SlackNoAutoUpdates -bool YES ''; }; -in if stdenv.isDarwin - then darwin - else linux +in +if stdenv.isDarwin +then darwin +else linux diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/stride/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/stride/default.nix index 47027da9a9..026dc5b640 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/stride/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/stride/default.nix @@ -1,8 +1,8 @@ -{ lib, stdenv, fetchurl, dpkg, alsaLib, atk, cairo, cups, dbus, expat, fontconfig +{ lib, stdenv, fetchurl, dpkg, alsa-lib, atk, cairo, cups, dbus, expat, fontconfig , freetype, gdk-pixbuf, glib, gnome2, gtk2, nspr, nss, pango, udev, xorg }: let fullPath = lib.makeLibraryPath [ - alsaLib + alsa-lib atk cairo cups diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teams/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teams/default.nix index cd7efb7ad8..ab6274cdf3 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teams/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teams/default.nix @@ -12,15 +12,16 @@ , coreutils , gawk , xdg-utils -, systemd }: +, systemd +, enableRectOverlay ? false }: stdenv.mkDerivation rec { pname = "teams"; - version = "1.4.00.7556"; + version = "1.4.00.13653"; src = fetchurl { url = "https://packages.microsoft.com/repos/ms-teams/pool/main/t/teams/teams_${version}_amd64.deb"; - sha256 = "0yak3jxh0gdn57wjss0s7sdjssf1b70j0klrcpv66bizqvw1xl7b"; + sha256 = "1kx4j837fd344zy90nl0j3r8cdvihy6i6gf56wd5n56zngx1fhjv"; }; nativeBuildInputs = [ dpkg autoPatchelfHook wrapGAppsHook ]; @@ -57,9 +58,11 @@ stdenv.mkDerivation rec { ln -s $out/opt/teams/teams $out/bin/ + ${lib.optionalString (!enableRectOverlay) '' # Work-around screen sharing bug # https://docs.microsoft.com/en-us/answers/questions/42095/sharing-screen-not-working-anymore-bug.html rm $out/opt/teams/resources/app.asar.unpacked/node_modules/slimcore/bin/rect-overlay + ''} runHook postInstall ''; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teamspeak/client.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teamspeak/client.nix index d2648eff57..048d40082d 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teamspeak/client.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teamspeak/client.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, makeWrapper, makeDesktopItem, zlib, glib, libpng, freetype, openssl , xorg, fontconfig, qtbase, qtwebengine, qtwebchannel, qtsvg, qtwebsockets, xkeyboard_config -, alsaLib, libpulseaudio ? null, libredirect, quazip, which, unzip, llvmPackages, writeShellScriptBin +, alsa-lib, libpulseaudio ? null, libredirect, quazip, which, unzip, llvmPackages, writeShellScriptBin }: let @@ -12,7 +12,7 @@ let deps = [ zlib glib libpng freetype xorg.libSM xorg.libICE xorg.libXrender openssl xorg.libXrandr xorg.libXfixes xorg.libXcursor xorg.libXinerama - xorg.libxcb fontconfig xorg.libXext xorg.libX11 alsaLib qtbase qtwebengine qtwebchannel qtsvg + xorg.libxcb fontconfig xorg.libXext xorg.libX11 alsa-lib qtbase qtwebengine qtwebchannel qtsvg qtwebsockets libpulseaudio quazip llvmPackages.libcxx llvmPackages.libcxxabi ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teamspeak/server.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teamspeak/server.nix index daa97b6821..44430ef62e 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teamspeak/server.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/teamspeak/server.nix @@ -4,13 +4,13 @@ let arch = if stdenv.is64bit then "amd64" else "x86"; in stdenv.mkDerivation rec { pname = "teamspeak-server"; - version = "3.13.5"; + version = "3.13.6"; src = fetchurl { url = "https://files.teamspeak-services.com/releases/server/${version}/teamspeak3-server_linux_${arch}-${version}.tar.bz2"; sha256 = if stdenv.is64bit - then "sha256-2tSX/ET2lZsi0mVB3KnbnBXMSTRsneGUA8w6mZ6TmlY=" - else "sha256-RdxG4nGXTTSY+P5oZu4uP5l7gKcU9C6uIILyNldSK50="; + then "sha256-U3BNJ4Jjhd39gD7iMsHT8CGtm/GFQDE2kYQa2btyK+w=" + else "sha256-8UKiFedv6w5bmqNvo3AXwQnUROwbZnU0ZTh9V17zmxQ="; }; buildInputs = [ stdenv.cc.cc postgresql.lib ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/kotatogram-desktop/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/kotatogram-desktop/default.nix index c88c97705f..d9f9cd91a5 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/kotatogram-desktop/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/kotatogram-desktop/default.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, fetchFromGitHub, callPackage , pkg-config, cmake, ninja, python3, wrapGAppsHook, wrapQtAppsHook , qtbase, qtimageformats, gtk3, libsForQt5, lz4, xxHash -, ffmpeg, openalSoft, minizip, libopus, alsaLib, libpulseaudio, range-v3 +, ffmpeg, openalSoft, minizip, libopus, alsa-lib, libpulseaudio, range-v3 , tl-expected, hunspell, glibmm, webkitgtk # Transitive dependencies: , pcre, xorg, util-linux, libselinux, libsepol, epoxy @@ -11,7 +11,7 @@ with lib; let - tg_owt = callPackage ../tdesktop/tg_owt.nix {}; + tg_owt = callPackage ./tg_owt.nix {}; in mkDerivation rec { pname = "kotatogram-desktop"; version = "1.4.1"; @@ -37,7 +37,7 @@ in mkDerivation rec { buildInputs = [ qtbase qtimageformats gtk3 libsForQt5.kwayland libsForQt5.libdbusmenu lz4 xxHash - ffmpeg openalSoft minizip libopus alsaLib libpulseaudio range-v3 + ffmpeg openalSoft minizip libopus alsa-lib libpulseaudio range-v3 tl-expected hunspell glibmm webkitgtk tg_owt # Transitive dependencies: diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/kotatogram-desktop/tg_owt.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/kotatogram-desktop/tg_owt.nix new file mode 100644 index 0000000000..614183b72d --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/kotatogram-desktop/tg_owt.nix @@ -0,0 +1,36 @@ +{ lib, stdenv, fetchFromGitHub, pkg-config, cmake, ninja, yasm +, libjpeg, openssl, libopus, ffmpeg, alsa-lib, libpulseaudio, protobuf +, xorg, libXtst +}: + +let + rev = "2d804d2c9c5d05324c8ab22f2e6ff8306521b3c3"; + sha256 = "0kz0i381iwsgcc3yzsq7njx3gkqja4bb9fsgc24vhg0md540qhyn"; + +in stdenv.mkDerivation { + pname = "tg_owt"; + version = "git-${rev}"; + + src = fetchFromGitHub { + owner = "desktop-app"; + repo = "tg_owt"; + inherit rev sha256; + fetchSubmodules = true; + }; + + outputs = [ "out" "dev" ]; + + nativeBuildInputs = [ pkg-config cmake ninja yasm ]; + + buildInputs = [ + libjpeg openssl libopus ffmpeg alsa-lib libpulseaudio protobuf + xorg.libX11 libXtst + ]; + + cmakeFlags = [ + # Building as a shared library isn't officially supported and currently broken: + "-DBUILD_SHARED_LIBS=OFF" + ]; + + meta.license = lib.licenses.bsd3; +} diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix index 27af969878..76d149048a 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix @@ -1,8 +1,9 @@ -{ mkDerivation, lib, fetchurl, fetchpatch, callPackage +{ mkDerivation, lib, fetchFromGitHub, callPackage , pkg-config, cmake, ninja, python3, wrapGAppsHook, wrapQtAppsHook, removeReferencesTo , qtbase, qtimageformats, gtk3, libsForQt5, enchant2, lz4, xxHash -, dee, ffmpeg, openalSoft, minizip, libopus, alsaLib, libpulseaudio, range-v3 -, tl-expected, hunspell, glibmm, webkitgtk, libtgvoip +, dee, ffmpeg, openalSoft, minizip, libopus, alsa-lib, libpulseaudio, range-v3 +, tl-expected, hunspell, glibmm, webkitgtk +, libtgvoip, rnnoise, abseil-cpp, extra-cmake-modules # Transitive dependencies: , pcre, xorg, util-linux, libselinux, libsepol, epoxy , at-spi2-core, libXtst, libthai, libdatrie @@ -22,26 +23,18 @@ let tg_owt = callPackage ./tg_owt.nix {}; in mkDerivation rec { pname = "telegram-desktop"; - version = "2.7.5"; + version = "2.8.3"; + # Note: Update via pkgs/applications/networking/instant-messengers/telegram/tdesktop/update.py # Telegram-Desktop with submodules - src = fetchurl { - url = "https://github.com/telegramdesktop/tdesktop/releases/download/v${version}/tdesktop-${version}-full.tar.gz"; - sha256 = "sha256-9GxBw5ii9Musjq7D3KMf/P5BA4h690EgXRbhynHwO98="; + src = fetchFromGitHub { + owner = "telegramdesktop"; + repo = "tdesktop"; + rev = "v${version}"; + fetchSubmodules = true; + sha256 = "1ywxsy3a99sdibipriblbzskmkqbnxwrz3lavfdr134wq8w8rjf7"; }; - patches = [ - # fixes issue with ffmpeg>=4.4 crashes, hasn't been upstreamed yet - (fetchpatch { - url = "https://raw.githubusercontent.com/gentoo/gentoo/1c91884873968997be4b0c954169d04dc839f1db/net-im/telegram-desktop/files/tdesktop-2.7.4-voice-crash.patch"; - sha256 = "sha256-inLXcP70yJlkkmdeXlc3HRL7Vt+Sf00LLJG33gwBKdY="; - }) - (fetchpatch { - url = "https://raw.githubusercontent.com/gentoo/gentoo/1c91884873968997be4b0c954169d04dc839f1db/net-im/telegram-desktop/files/tdesktop-2.7.4-voice-ffmpeg44.patch"; - sha256 = "sha256-p57LipNf7BDhVvNKRuicVqx0vU6IBL/Cvr5BAfLF4Hs="; - }) - ]; - postPatch = '' substituteInPlace Telegram/lib_spellcheck/spellcheck/platform/linux/linux_enchant.cpp \ --replace '"libenchant-2.so.2"' '"${enchant2}/lib/libenchant-2.so.2"' @@ -57,9 +50,10 @@ in mkDerivation rec { buildInputs = [ qtbase qtimageformats gtk3 libsForQt5.kwayland libsForQt5.libdbusmenu enchant2 lz4 xxHash - dee ffmpeg openalSoft minizip libopus alsaLib libpulseaudio range-v3 + dee ffmpeg openalSoft minizip libopus alsa-lib libpulseaudio range-v3 tl-expected hunspell glibmm webkitgtk - tg_owt libtgvoip + libtgvoip rnnoise abseil-cpp extra-cmake-modules + tg_owt # Transitive dependencies: pcre xorg.libpthreadstubs xorg.libXdmcp util-linux libselinux libsepol epoxy at-spi2-core libXtst libthai libdatrie libsysprof-capture libpsl brotli @@ -104,6 +98,7 @@ in mkDerivation rec { passthru = { inherit tg_owt; + updateScript = ./update.py; }; meta = { diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/tg_owt.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/tg_owt.nix index 6bd72134e0..46076bca68 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/tg_owt.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/tg_owt.nix @@ -1,20 +1,20 @@ -{ lib, stdenv, fetchFromGitHub, pkg-config, cmake, ninja, yasm -, libjpeg, openssl, libopus, ffmpeg, alsaLib, libpulseaudio, protobuf -, xorg, libXtst +{ lib, stdenv, fetchFromGitHub, fetchpatch +, pkg-config, cmake, ninja, yasm +, libjpeg, openssl, libopus, ffmpeg, alsa-lib, libpulseaudio, protobuf +, xorg, libXtst, libXcomposite, libXdamage, libXext, libXrender, libXrandr +, glib, abseil-cpp, pcre, util-linuxMinimal, libselinux, libsepol, pipewire +, libXi }: -let - rev = "2d804d2c9c5d05324c8ab22f2e6ff8306521b3c3"; - sha256 = "0kz0i381iwsgcc3yzsq7njx3gkqja4bb9fsgc24vhg0md540qhyn"; - -in stdenv.mkDerivation { +stdenv.mkDerivation { pname = "tg_owt"; - version = "git-${rev}"; + version = "unstable-2021-06-27"; src = fetchFromGitHub { owner = "desktop-app"; repo = "tg_owt"; - inherit rev sha256; + rev = "91d836dc84a16584c6ac52b36c04c0de504d9c34"; + sha256 = "1ir4svv5mijpzr0rmx65088iikck83vhcdqrpf9dnk6yp4j9v4v2"; fetchSubmodules = true; }; @@ -23,8 +23,10 @@ in stdenv.mkDerivation { nativeBuildInputs = [ pkg-config cmake ninja yasm ]; buildInputs = [ - libjpeg openssl libopus ffmpeg alsaLib libpulseaudio protobuf - xorg.libX11 libXtst + libjpeg openssl libopus ffmpeg alsa-lib libpulseaudio protobuf + xorg.libX11 libXtst libXcomposite libXdamage libXext libXrender libXrandr + glib abseil-cpp pcre util-linuxMinimal libselinux libsepol pipewire + libXi ]; cmakeFlags = [ diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/update.py b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/update.py new file mode 100755 index 0000000000..8f39533e29 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/telegram/tdesktop/update.py @@ -0,0 +1,77 @@ +#! /usr/bin/env nix-shell +#! nix-shell -i python3 -p python3 nix nix-prefetch-git + +import fileinput +import json +import os +import re +import subprocess + +from datetime import datetime +from urllib.request import urlopen, Request + + +DIR = os.path.dirname(os.path.abspath(__file__)) +HEADERS = {'Accept': 'application/vnd.github.v3+json'} + + +def github_api_request(endpoint): + base_url = 'https://api.github.com/' + request = Request(base_url + endpoint, headers=HEADERS) + with urlopen(request) as http_response: + return json.loads(http_response.read().decode('utf-8')) + + +def get_commit_date(repo, sha): + url = f'https://api.github.com/repos/{repo}/commits/{sha}' + request = Request(url, headers=HEADERS) + with urlopen(request) as http_response: + commit = json.loads(http_response.read().decode()) + date = commit['commit']['committer']['date'].rstrip('Z') + date = datetime.fromisoformat(date).date().isoformat() + return 'unstable-' + date + + +def nix_prefetch_git(url, rev): + """Prefetches the requested Git revision (incl. submodules) of the given repository URL.""" + print(f'nix-prefetch-git {url} {rev}') + out = subprocess.check_output(['nix-prefetch-git', '--quiet', '--url', url, '--rev', rev, '--fetch-submodules']) + return json.loads(out)['sha256'] + + +def nix_prefetch_url(url, unpack=False): + """Prefetches the content of the given URL.""" + print(f'nix-prefetch-url {url}') + options = ['--type', 'sha256'] + if unpack: + options += ['--unpack'] + out = subprocess.check_output(['nix-prefetch-url'] + options + [url]) + return out.decode('utf-8').rstrip() + + +def update_file(relpath, version, sha256, rev=None): + file_path = os.path.join(DIR, relpath) + with fileinput.FileInput(file_path, inplace=True) as f: + for line in f: + result = line + result = re.sub(r'^ version = ".+";', f' version = "{version}";', result) + result = re.sub(r'^ sha256 = ".+";', f' sha256 = "{sha256}";', result) + if rev: + result = re.sub(r'^ rev = ".*";', f' rev = "{rev}";', result) + print(result, end='') + + +if __name__ == "__main__": + tdesktop_tag = github_api_request('repos/telegramdesktop/tdesktop/releases/latest')['tag_name'] + tdesktop_version = tdesktop_tag.lstrip('v') + tdesktop_hash = nix_prefetch_git('https://github.com/telegramdesktop/tdesktop.git', tdesktop_tag) + update_file('default.nix', tdesktop_version, tdesktop_hash) + tg_owt_ref = github_api_request('repos/desktop-app/tg_owt/commits/master')['sha'] + tg_owt_version = get_commit_date('desktop-app/tg_owt', tg_owt_ref) + tg_owt_hash = nix_prefetch_git('https://github.com/desktop-app/tg_owt.git', tg_owt_ref) + update_file('tg_owt.nix', tg_owt_version, tg_owt_hash, tg_owt_ref) + tg_owt_ref = github_api_request('repos/desktop-app/tg_owt/commits/master')['sha'] + libtgvoip_ref = github_api_request(f'repos/telegramdesktop/tdesktop/contents/Telegram/ThirdParty/libtgvoip?ref={tdesktop_tag}')['sha'] + libtgvoip_version = get_commit_date('telegramdesktop/libtgvoip', libtgvoip_ref) + libtgvoip_hash = nix_prefetch_url(f'https://github.com/telegramdesktop/libtgvoip/archive/{libtgvoip_ref}.tar.gz', unpack=True) + update_file('../../../../../development/libraries/libtgvoip/default.nix', libtgvoip_version, libtgvoip_hash, libtgvoip_ref) diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/twinkle/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/twinkle/default.nix index 8b306c0750..01c83ba7b1 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/twinkle/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/twinkle/default.nix @@ -12,7 +12,7 @@ , qtbase , qttools , qtquickcontrols2 -, alsaLib +, alsa-lib , speex , ilbc , fetchurl @@ -41,7 +41,7 @@ mkDerivation rec { qtbase qttools qtquickcontrols2 - alsaLib + alsa-lib speex ilbc ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/viber/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/viber/default.nix index 7496063c58..66d33533a7 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/viber/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/viber/default.nix @@ -1,5 +1,5 @@ {fetchurl, lib, stdenv, dpkg, makeWrapper, - alsaLib, cups, curl, dbus, expat, fontconfig, freetype, glib, gst_all_1, + alsa-lib, cups, curl, dbus, expat, fontconfig, freetype, glib, gst_all_1, harfbuzz, libcap, libGL, libGLU, libpulseaudio, libxkbcommon, libxml2, libxslt, nspr, nss, openssl, systemd, wayland, xorg, zlib, ... }: @@ -20,7 +20,7 @@ stdenv.mkDerivation { dontUnpack = true; libPath = lib.makeLibraryPath [ - alsaLib + alsa-lib cups curl dbus diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/vk-messenger/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/vk-messenger/default.nix index 96ae3993b3..51b119aa6d 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/vk-messenger/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/vk-messenger/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, rpmextract, undmg, autoPatchelfHook -, xorg, gtk3, gnome2, nss, alsaLib, udev, libnotify +, xorg, gtk3, gnome2, nss, alsa-lib, udev, libnotify , wrapGAppsHook }: let @@ -35,7 +35,7 @@ let nativeBuildInputs = [ rpmextract autoPatchelfHook wrapGAppsHook ]; buildInputs = (with xorg; [ libXdamage libXtst libXScrnSaver libxkbfile - ]) ++ [ gtk3 nss alsaLib ]; + ]) ++ [ gtk3 nss alsa-lib ]; runtimeDependencies = [ (lib.getLib udev) libnotify ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/wavebox/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/wavebox/default.nix index ba0f867b2a..371ac91120 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/wavebox/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/wavebox/default.nix @@ -1,4 +1,4 @@ -{ alsaLib, autoPatchelfHook, fetchurl, gtk3, libnotify +{ alsa-lib, autoPatchelfHook, fetchurl, gtk3, libnotify , makeDesktopItem, makeWrapper, nss, lib, stdenv, udev, xdg-utils , xorg }: @@ -37,7 +37,7 @@ in stdenv.mkDerivation { buildInputs = with xorg; [ libXdmcp libXScrnSaver libXtst ] ++ [ - alsaLib gtk3 nss + alsa-lib gtk3 nss ]; runtimeDependencies = [ (getLib udev) libnotify ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/zoom-us/default.nix b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/zoom-us/default.nix index 364e6e294e..1684658071 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/zoom-us/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/instant-messengers/zoom-us/default.nix @@ -3,7 +3,7 @@ , fetchurl , makeWrapper # Dynamic libraries -, alsaLib +, alsa-lib , atk , cairo , dbus @@ -29,17 +29,17 @@ assert pulseaudioSupport -> libpulseaudio != null; let - version = "5.6.20278.0524"; + version = "5.6.22045.0607"; srcs = { x86_64-linux = fetchurl { url = "https://zoom.us/client/${version}/zoom_x86_64.pkg.tar.xz"; - sha256 = "1nkpmrpb0bz4zkg8nszxmcfy3ymigd2bmxhnxbjrcnv64ykdrgp7"; + sha256 = "0zdk02zq9apxnfbxwnlda9z8nqkqa1h1javbh9wwj8yy3y3a1lb5"; }; }; libs = lib.makeLibraryPath ([ # $ LD_LIBRARY_PATH=$NIX_LD_LIBRARY_PATH:$PWD ldd zoom | grep 'not found' - alsaLib + alsa-lib atk cairo dbus diff --git a/third_party/nixpkgs/pkgs/applications/networking/insync/v3.nix b/third_party/nixpkgs/pkgs/applications/networking/insync/v3.nix index 0c18ec60ab..ad202871b9 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/insync/v3.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/insync/v3.nix @@ -10,7 +10,7 @@ , nss , libthai , wayland -, alsaLib +, alsa-lib , qtvirtualkeyboard , qtwebchannel , qtwebsockets @@ -34,7 +34,7 @@ stdenv.mkDerivation rec { ''; buildInputs = [ - alsaLib + alsa-lib libGL libthai libxcb diff --git a/third_party/nixpkgs/pkgs/applications/networking/ipfs/default.nix b/third_party/nixpkgs/pkgs/applications/networking/ipfs/default.nix index 1b648108e7..e96602a54c 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/ipfs/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/ipfs/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "ipfs"; - version = "0.8.0"; + version = "0.9.0"; rev = "v${version}"; # go-ipfs makes changes to it's source tarball that don't match the git source. src = fetchurl { url = "https://github.com/ipfs/go-ipfs/releases/download/${rev}/go-ipfs-source.tar.gz"; - sha256 = "sha256-uK3+Ekr5AM6mmGmjFSj1Rotm5pbH657BYUlP9B39WEw="; + sha256 = "sha256:1fyffnw1d860w7gwm6ijbgrh68297z5bmvww8yqfshm3xgvcs6bf"; }; # tarball contains multiple files/directories diff --git a/third_party/nixpkgs/pkgs/applications/networking/irc/convos/default.nix b/third_party/nixpkgs/pkgs/applications/networking/irc/convos/default.nix index ba1837ee96..8ff5c50b8a 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/irc/convos/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/irc/convos/default.nix @@ -6,13 +6,13 @@ with lib; perlPackages.buildPerlPackage rec { pname = "convos"; - version = "6.11"; + version = "6.24"; src = fetchFromGitHub { owner = "convos-chat"; repo = pname; rev = "v${version}"; - sha256 = "19nzm7f3glvj34nj9pvnp0h9xx6baq58c11ddkqfmq7w3sci49hi"; + sha256 = "0hrz74fybypkjf9hraknylxrhnz7bhk00pk6wla2wfg8s2798zlx"; }; nativeBuildInputs = [ makeWrapper ] diff --git a/third_party/nixpkgs/pkgs/applications/networking/irc/weechat/default.nix b/third_party/nixpkgs/pkgs/applications/networking/irc/weechat/default.nix index 58b462194b..69fca696d4 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/irc/weechat/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/irc/weechat/default.nix @@ -10,6 +10,7 @@ , rubySupport ? true, ruby , tclSupport ? true, tcl , extraBuildInputs ? [] +, fetchpatch }: let @@ -27,16 +28,25 @@ let in assert lib.all (p: p.enabled -> ! (builtins.elem null p.buildInputs)) plugins; stdenv.mkDerivation rec { - version = "3.1"; + version = "3.2"; pname = "weechat"; hardeningEnable = [ "pie" ]; src = fetchurl { url = "https://weechat.org/files/src/weechat-${version}.tar.bz2"; - sha256 = "06w147wzrzp6xbqiz6s5nq5xdjy7jn3f18xajxy50pynjd6vmfh5"; + sha256 = "0pck4lczkk52mgwa1n0habp1xqi9xsgsh5q6bbsjmdbandvy5vc8"; }; + patches = [ + # weechat 3.2 fails to build on Darwin, but is fixed for the next release: + (fetchpatch { + url = "https://github.com/weechat/weechat/commit/0b7e4977bef763993e361c23db0f52117b799949.patch"; + sha256 = "eVdrhr4mrqv+OkqYOv1E7mUkmzd5NC3LmZhbXJnCpFg="; + excludes = [ "ChangeLog.adoc" ]; + }) + ]; + outputs = [ "out" "man" ] ++ map (p: p.name) enabledPlugins; cmakeFlags = with lib; [ diff --git a/third_party/nixpkgs/pkgs/applications/networking/irc/weechat/scripts/wee-slack/default.nix b/third_party/nixpkgs/pkgs/applications/networking/irc/weechat/scripts/wee-slack/default.nix index 698ee80edf..aebe906659 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/irc/weechat/scripts/wee-slack/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/irc/weechat/scripts/wee-slack/default.nix @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { env = "${buildEnv { name = "wee-slack-env"; paths = with python3Packages; [ - websocket_client + websocket-client six ]; }}/${python3Packages.python.sitePackages}"; diff --git a/third_party/nixpkgs/pkgs/applications/networking/maestral-qt/default.nix b/third_party/nixpkgs/pkgs/applications/networking/maestral-qt/default.nix index 69d3bde42e..d35120e575 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/maestral-qt/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/maestral-qt/default.nix @@ -6,14 +6,14 @@ python3.pkgs.buildPythonApplication rec { pname = "maestral-qt"; - version = "1.4.3"; + version = "1.4.4"; disabled = python3.pkgs.pythonOlder "3.6"; src = fetchFromGitHub { owner = "SamSchott"; repo = "maestral-qt"; rev = "v${version}"; - sha256 = "sha256-+eBwBZx+kp2ACbFjtYK6ux9lcPmEQsunvxAAZ2HgAYw="; + sha256 = "sha256-4IrLwpdMepXBxjgR6euENuVKaPRU0dLiApJO45DB2C4="; }; propagatedBuildInputs = with python3.pkgs; [ @@ -45,6 +45,6 @@ python3.pkgs.buildPythonApplication rec { license = licenses.mit; maintainers = with maintainers; [ peterhoeg ]; platforms = platforms.linux; - inherit (src.meta) homepage; + homepage = "https://maestral.app"; }; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/claws-mail/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/claws-mail/default.nix index 4a13cf68a8..e28680c245 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/claws-mail/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/claws-mail/default.nix @@ -21,7 +21,7 @@ , enableLdap ? true, openldap , enableNetworkManager ? true, networkmanager , enableLibetpan ? true, libetpan -, enableValgrind ? true, valgrind +, enableValgrind ? !stdenv.isDarwin && lib.meta.availableOn stdenv.hostPlatform valgrind, valgrind , enableSvg ? true, librsvg # Configure claws-mail's plugins diff --git a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/electron-mail/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/electron-mail/default.nix new file mode 100644 index 0000000000..1f7d663cf8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/electron-mail/default.nix @@ -0,0 +1,33 @@ +{ appimageTools, lib, fetchurl }: + +let + pname = "electron-mail"; + version = "4.12.2"; + name = "ElectronMail-${version}"; + + src = fetchurl { + url = "https://github.com/vladimiry/ElectronMail/releases/download/v${version}/electron-mail-${version}-linux-x86_64.AppImage"; + sha256 = "D+0qoIb0EwUVbgKOiKQpqoLDgm8l/UKDWm/BjhW4MYU="; + }; + + appimageContents = appimageTools.extract { inherit name src; }; +in appimageTools.wrapType2 { + inherit name src; + + extraInstallCommands = '' + mv $out/bin/${name} $out/bin/${pname} + + install -m 444 -D ${appimageContents}/${pname}.desktop -t $out/share/applications + substituteInPlace $out/share/applications/${pname}.desktop \ + --replace 'Exec=AppRun' 'Exec=${pname}' + cp -r ${appimageContents}/usr/share/icons $out/share + ''; + + meta = with lib; { + description = "ElectronMail is an Electron-based unofficial desktop client for ProtonMail"; + homepage = "https://github.com/vladimiry/ElectronMail"; + license = licenses.mit; + maintainers = [ maintainers.princemachiavelli ]; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/himalaya/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/himalaya/default.nix index b810103cf2..b1c709b055 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/himalaya/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/himalaya/default.nix @@ -11,16 +11,16 @@ }: rustPlatform.buildRustPackage rec { pname = "himalaya"; - version = "0.3.2"; + version = "0.4.0"; src = fetchFromGitHub { owner = "soywod"; repo = pname; rev = "v${version}"; - sha256 = "sha256-wiasnkoIU4l1yyhUSTahOJMCOyhpz2w4WJzi/UBmiHE="; + sha256 = "sha256-6RgT/SxO4vsk8Yx2AbaNIFvnAvgDmeTXvb/v6nUJxhc="; }; - cargoSha256 = "sha256-VXSJLDpT0s+sh6buOP63QSiUp34H6G/FWibemtNU9wQ="; + cargoSha256 = "sha256-NEuIh7FwIdAWzlChna3+G0VukfV8nYZfVWa+3LxQCIA="; # use --lib flag to avoid test with imap server # https://github.com/soywod/himalaya/issues/145 diff --git a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/mailspring/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/mailspring/default.nix index 29667eb52c..8fe93fb1a4 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/mailspring/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/mailspring/default.nix @@ -2,12 +2,13 @@ , lib , fetchurl , autoPatchelfHook -, alsaLib +, alsa-lib , coreutils , db , dpkg , glib , gtk3 +, wrapGAppsHook , libkrb5 , libsecret , nss @@ -28,10 +29,11 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoPatchelfHook dpkg + wrapGAppsHook ]; buildInputs = [ - alsaLib + alsa-lib db glib gtk3 diff --git a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/mutt/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/mutt/default.nix index b5f938b264..1428fa6a42 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/mutt/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/mutt/default.nix @@ -27,11 +27,11 @@ with lib; stdenv.mkDerivation rec { pname = "mutt"; - version = "2.0.7"; + version = "2.1.0"; src = fetchurl { url = "http://ftp.mutt.org/pub/mutt/${pname}-${version}.tar.gz"; - sha256 = "sha256-lXaIxqUhVhmS1PLyfPn+sjnHxsAELGBhwOR0p90mzJE="; + sha256 = "0dqd6gg1wwhxjgdfl8j0kf93mw43kvd6wrwrzkscq2wjrsy5p0w0"; }; patches = optional smimeSupport (fetchpatch { diff --git a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/notmuch/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/notmuch/default.nix index 6919e31342..dceb9c92de 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/notmuch/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/notmuch/default.nix @@ -12,7 +12,7 @@ with lib; stdenv.mkDerivation rec { - version = "0.31.4"; + version = "0.32.1"; pname = "notmuch"; passthru = { @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { src = fetchgit { url = "https://git.notmuchmail.org/git/notmuch"; - sha256 = "sha256-M+LEf257OcDlHOCYYxzEVQpop+i2gzO/QJPdajz/CRM="; + sha256 = "sha256:06r0hdz8mxnzag74md62a9m6c2zm0fxn45n4n1c26j5cmrys7j16"; rev = version; }; diff --git a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/sylpheed/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/sylpheed/default.nix index 48a212b4ff..9a65bec21c 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/sylpheed/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/sylpheed/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, pkg-config, gtk2, openssl ? null, gpgme ? null -, gpgSupport ? true, sslSupport ? true }: +, gpgSupport ? true, sslSupport ? true, fetchpatch }: assert gpgSupport -> gpgme != null; assert sslSupport -> openssl != null; @@ -15,6 +15,17 @@ stdenv.mkDerivation rec { sha256 = "0j9y5vdzch251s264diw9clrn88dn20bqqkwfmis9l7m8vmwasqd"; }; + patches = [ + (fetchpatch { + # patch upstream bug https://sylpheed.sraoss.jp/redmine/issues/306 + name = "patch-libsylph_ssl_c.patch"; + url = "https://cvsweb.openbsd.org/cgi-bin/cvsweb/~checkout~/ports/mail/sylpheed/patches/patch-libsylph_ssl_c?rev=1.4&content-type=text/plain"; + sha256 = "sha256-k9OwPtHrEjaxXdH0trNqXgJMhR8kjgtei9pi6OFvILk="; + }) + ]; + + patchFlags = [ "-p0" ]; + nativeBuildInputs = [ pkg-config ]; buildInputs = [ gtk2 ] diff --git a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix index b81128545d..f3634b744a 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/thunderbird-bin/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, config, makeWrapper -, alsaLib +, alsa-lib , at-spi2-atk , atk , cairo @@ -78,7 +78,7 @@ stdenv.mkDerivation { libPath = lib.makeLibraryPath [ stdenv.cc.cc - alsaLib + alsa-lib at-spi2-atk atk cairo diff --git a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/thunderbird/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/thunderbird/default.nix index 31a15d6948..00c6b5cbf2 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/mailreaders/thunderbird/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/mailreaders/thunderbird/default.nix @@ -58,7 +58,7 @@ , debugBuild ? false -, alsaSupport ? stdenv.isLinux, alsaLib +, alsaSupport ? stdenv.isLinux, alsa-lib , pulseaudioSupport ? stdenv.isLinux, libpulseaudio , gtk3Support ? true, gtk2, gtk3, wrapGAppsHook , waylandSupport ? true, libdrm @@ -140,7 +140,7 @@ stdenv.mkDerivation rec { xorg.libXdamage zip zlib - ] ++ lib.optional alsaSupport alsaLib + ] ++ lib.optional alsaSupport alsa-lib ++ lib.optional gtk3Support gtk3 ++ lib.optional pulseaudioSupport libpulseaudio ++ lib.optionals waylandSupport [ libxkbcommon libdrm ]; @@ -335,7 +335,7 @@ stdenv.mkDerivation rec { attrPath = "thunderbird-78"; baseUrl = "http://archive.mozilla.org/pub/thunderbird/releases/"; inherit writeScript lib common-updater-scripts xidel coreutils gnused - gnugrep curl runtimeShell; + gnugrep gnupg curl runtimeShell; }; requiredSystemFeatures = [ "big-parallel" ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/mullvad-vpn/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mullvad-vpn/default.nix index 68a9362b87..33030e0c7e 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/mullvad-vpn/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/mullvad-vpn/default.nix @@ -1,11 +1,11 @@ { stdenv, lib, fetchurl, dpkg -, alsaLib, atk, cairo, cups, dbus, expat, fontconfig, freetype +, alsa-lib, atk, cairo, cups, dbus, expat, fontconfig, freetype , gdk-pixbuf, glib, gnome2, pango, nspr, nss, gtk3, mesa , xorg, autoPatchelfHook, systemd, libnotify, libappindicator }: let deps = [ - alsaLib + alsa-lib atk cairo cups diff --git a/third_party/nixpkgs/pkgs/applications/networking/mumble/default.nix b/third_party/nixpkgs/pkgs/applications/networking/mumble/default.nix index 088391ba48..e0c5b50be0 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/mumble/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/mumble/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchFromGitHub, pkg-config, qt5 , avahi, boost, libopus, libsndfile, protobuf, speex, libcap -, alsaLib, python3 +, alsa-lib, python3 , rnnoise , jackSupport ? false, libjack2 , speechdSupport ? false, speechd @@ -73,7 +73,7 @@ let nativeBuildInputs = [ qt5.qttools ]; buildInputs = [ libopus libsndfile speex qt5.qtsvg rnnoise ] - ++ lib.optional stdenv.isLinux alsaLib + ++ lib.optional stdenv.isLinux alsa-lib ++ lib.optional jackSupport libjack2 ++ lib.optional speechdSupport speechd ++ lib.optional pulseSupport libpulseaudio; diff --git a/third_party/nixpkgs/pkgs/applications/networking/newsreaders/pan/default.nix b/third_party/nixpkgs/pkgs/applications/networking/newsreaders/pan/default.nix index 90bbd31a88..b6afe0aa44 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/newsreaders/pan/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/newsreaders/pan/default.nix @@ -1,24 +1,40 @@ { spellChecking ? true -, lib, stdenv, fetchurl, pkg-config, gtk3, gtkspell3 ? null -, gmime2, gettext, intltool, itstool, libxml2, libnotify, gnutls -, makeWrapper, gnupg -, gnomeSupport ? true, libsecret, gcr +, lib +, stdenv +, fetchurl +, pkg-config +, gtk3 +, gtkspell3 +, gmime2 +, gettext +, intltool +, itstool +, libxml2 +, libnotify +, gnutls +, makeWrapper +, gnupg +, gnomeSupport ? true +, libsecret +, gcr }: -assert spellChecking -> gtkspell3 != null; - -let version = "0.146"; in - -stdenv.mkDerivation { +stdenv.mkDerivation rec { pname = "pan"; - inherit version; + version = "0.146"; src = fetchurl { - url = "http://pan.rebelbase.com/download/releases/${version}/source/pan-${version}.tar.bz2"; + url = "https://pan.rebelbase.com/download/releases/${version}/source/pan-${version}.tar.bz2"; sha256 = "17agd27sn4a7nahvkpg0w39kv74njgdrrygs74bbvpaj8rk2hb55"; }; + patches = [ + # Take , , "gtk-compat.h" out of extern "C" + ./move-out-of-extern-c.diff + ]; + nativeBuildInputs = [ pkg-config gettext intltool itstool libxml2 makeWrapper ]; + buildInputs = [ gtk3 gmime2 libnotify gnutls ] ++ lib.optional spellChecking gtkspell3 ++ lib.optionals gnomeSupport [ libsecret gcr ]; @@ -29,7 +45,7 @@ stdenv.mkDerivation { "--with-gnutls" "--enable-libnotify" ] ++ lib.optional spellChecking "--with-gtkspell" - ++ lib.optional gnomeSupport "--enable-gkr"; + ++ lib.optional gnomeSupport "--enable-gkr"; postInstall = '' wrapProgram $out/bin/pan --suffix PATH : ${gnupg}/bin @@ -42,6 +58,6 @@ stdenv.mkDerivation { homepage = "http://pan.rebelbase.com/"; maintainers = [ maintainers.eelco ]; platforms = platforms.linux; - license = with licenses; [ gpl2 fdl11 ]; + license = with licenses; [ gpl2Only fdl11 ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/newsreaders/pan/move-out-of-extern-c.diff b/third_party/nixpkgs/pkgs/applications/networking/newsreaders/pan/move-out-of-extern-c.diff new file mode 100644 index 0000000000..02b19b58ee --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/networking/newsreaders/pan/move-out-of-extern-c.diff @@ -0,0 +1,1113 @@ +diff --git a/pan/data-impl/article-filter.cc b/pan/data-impl/article-filter.cc +index b06d0c2..f424738 100644 +--- a/pan/data-impl/article-filter.cc ++++ b/pan/data-impl/article-filter.cc +@@ -25,10 +25,7 @@ + #include + + //#include +-extern "C" +-{ +- #include +-} ++#include + + #include "article-filter.h" + +diff --git a/pan/data-impl/data-impl.cc b/pan/data-impl/data-impl.cc +index 88012cc..4465966 100644 +--- a/pan/data-impl/data-impl.cc ++++ b/pan/data-impl/data-impl.cc +@@ -22,10 +22,8 @@ + **************/ + + #include +-extern "C" { +- #include +- #include // for g_build_filename +-} ++#include ++#include // for g_build_filename + #include + #include + #include +diff --git a/pan/data-impl/data-io.cc b/pan/data-impl/data-io.cc +index bea1a90..d938634 100644 +--- a/pan/data-impl/data-io.cc ++++ b/pan/data-impl/data-io.cc +@@ -27,9 +27,9 @@ extern "C" { + #include // for chmod + #include // for chmod + #include +- #include +- #include + } ++#include ++#include + #include + #include + #include +diff --git a/pan/data-impl/groups.cc b/pan/data-impl/groups.cc +index 244feb9..da0183a 100644 +--- a/pan/data-impl/groups.cc ++++ b/pan/data-impl/groups.cc +@@ -29,9 +29,9 @@ + #include + + #include ++#include + extern "C" { + #include +- #include + } + + #include +diff --git a/pan/data-impl/headers.cc b/pan/data-impl/headers.cc +index f8c4466..16d5672 100644 +--- a/pan/data-impl/headers.cc ++++ b/pan/data-impl/headers.cc +@@ -25,10 +25,10 @@ + #include + #include + #include ++#include + extern "C" { + #include // for chmod + #include // for chmod +- #include + } + #include + #include +diff --git a/pan/data-impl/profiles.cc b/pan/data-impl/profiles.cc +index e999fda..a6e6bb5 100644 +--- a/pan/data-impl/profiles.cc ++++ b/pan/data-impl/profiles.cc +@@ -26,9 +26,9 @@ + extern "C" { + #include // for chmod + #include // for chmod +- #include +- #include + } ++#include ++#include + #include + #include + #include +diff --git a/pan/data-impl/server.cc b/pan/data-impl/server.cc +index 9ea55d4..b23782f 100644 +--- a/pan/data-impl/server.cc ++++ b/pan/data-impl/server.cc +@@ -25,10 +25,8 @@ + #include + #include + #include +-extern "C" { +- #include // for GMarkup +- #include +-} ++#include // for GMarkup ++#include + #include + #include + #include +diff --git a/pan/data-impl/xover.cc b/pan/data-impl/xover.cc +index ff8644f..a199556 100644 +--- a/pan/data-impl/xover.cc ++++ b/pan/data-impl/xover.cc +@@ -20,10 +20,8 @@ + #include + #include + #include +-extern "C" { +- #include +- #include +-} ++#include ++#include + #include + #include + #include +diff --git a/pan/data/article-cache.cc b/pan/data/article-cache.cc +index 1855153..30fa0f9 100644 +--- a/pan/data/article-cache.cc ++++ b/pan/data/article-cache.cc +@@ -26,11 +26,10 @@ extern "C" + #include + #include + #include +- +- #include +- #include +- #include + } ++#include ++#include ++#include + + #include + #include +diff --git a/pan/data/article-cache.h b/pan/data/article-cache.h +index 2ac722b..1304bfe 100644 +--- a/pan/data/article-cache.h ++++ b/pan/data/article-cache.h +@@ -22,9 +22,7 @@ + + #include + #include +-extern "C" { +- #include // for guint64 +-} ++#include // for guint64 + #include + #include + +diff --git a/pan/data/cert-store.cc b/pan/data/cert-store.cc +index 340fc8b..f6cd46e 100644 +--- a/pan/data/cert-store.cc ++++ b/pan/data/cert-store.cc +@@ -34,10 +34,8 @@ + #include + #include + +-extern "C" { + #include + #include +-} + + #include + #include +diff --git a/pan/data/encode-cache.cc b/pan/data/encode-cache.cc +index 3a82ea9..61c67a2 100644 +--- a/pan/data/encode-cache.cc ++++ b/pan/data/encode-cache.cc +@@ -28,11 +28,10 @@ extern "C" + #include + #include + #include +- +- #include +- #include +- #include + } ++#include ++#include ++#include + + #include + #include +diff --git a/pan/data/encode-cache.h b/pan/data/encode-cache.h +index 8bbd530..1affc0c 100644 +--- a/pan/data/encode-cache.h ++++ b/pan/data/encode-cache.h +@@ -22,9 +22,7 @@ + + #include + #include +-extern "C" { +- #include // for guint64 +-} ++#include // for guint64 + #include + #include + +diff --git a/pan/general/e-util.cc b/pan/general/e-util.cc +index af5ccd0..62879ee 100644 +--- a/pan/general/e-util.cc ++++ b/pan/general/e-util.cc +@@ -26,9 +26,9 @@ + #include + extern "C" { + #include +- #include +- #include + } ++#include ++#include + #include "debug.h" + #include "e-util.h" + +diff --git a/pan/general/file-util.cc b/pan/general/file-util.cc +index 02e9ed1..9efa269 100644 +--- a/pan/general/file-util.cc ++++ b/pan/general/file-util.cc +@@ -27,12 +27,12 @@ extern "C" + #include + #include + #include +- #include +- #include + #ifndef G_OS_WIN32 + #include + #endif + } ++#include ++#include + + #include "debug.h" + #include "log.h" +diff --git a/pan/general/file-util.h b/pan/general/file-util.h +index c125c8d..8c67639 100644 +--- a/pan/general/file-util.h ++++ b/pan/general/file-util.h +@@ -25,9 +25,9 @@ + extern "C" { + #include + #include +- #include +- #include + } ++#include ++#include + #include + + #define g_freopen freopen +diff --git a/pan/general/line-reader.cc b/pan/general/line-reader.cc +index afb9be8..6b80fc4 100644 +--- a/pan/general/line-reader.cc ++++ b/pan/general/line-reader.cc +@@ -1,9 +1,7 @@ + #include + #include + #include +-extern "C"{ +- #include +-} ++#include + #include + #include "file-util.h" + #include "line-reader.h" +diff --git a/pan/general/macros.h b/pan/general/macros.h +index 6dcf908..b16230f 100644 +--- a/pan/general/macros.h ++++ b/pan/general/macros.h +@@ -63,9 +63,6 @@ + *** g_assert + **/ + +-extern "C" +-{ +- #include +-} ++#include + + #endif +diff --git a/pan/general/text-match.cc b/pan/general/text-match.cc +index fcacbe2..d390de0 100644 +--- a/pan/general/text-match.cc ++++ b/pan/general/text-match.cc +@@ -20,9 +20,9 @@ + #include + extern "C" { + #include +- #include +- #include + } ++#include ++#include + #include "debug.h" + #include "log.h" + #include "text-match.h" +diff --git a/pan/general/utf8-utils.cc b/pan/general/utf8-utils.cc +index be79a13..fea6100 100644 +--- a/pan/general/utf8-utils.cc ++++ b/pan/general/utf8-utils.cc +@@ -21,9 +21,7 @@ + #include + #include + #include +-extern "C" { + #include +-} + #include + #include + #include +diff --git a/pan/gui/actions.cc b/pan/gui/actions.cc +index 520c08b..5ec397c 100644 +--- a/pan/gui/actions.cc ++++ b/pan/gui/actions.cc +@@ -18,11 +18,9 @@ + */ + + #include +-extern "C" { +- #include +- #include "gtk-compat.h" +-} ++#include "gtk-compat.h" + ++#include + #include + #include + #include +diff --git a/pan/gui/body-pane.cc b/pan/gui/body-pane.cc +index 53e9124..e9841e2 100644 +--- a/pan/gui/body-pane.cc ++++ b/pan/gui/body-pane.cc +@@ -22,11 +22,9 @@ + #include + #include + #include +-extern "C" { +- #include +- #include "gtk-compat.h" +- #include +-} ++#include "gtk-compat.h" ++#include ++#include + #include + #include + #include +diff --git a/pan/gui/dl-headers-ui.cc b/pan/gui/dl-headers-ui.cc +index 5841651..e9f4b2d 100644 +--- a/pan/gui/dl-headers-ui.cc ++++ b/pan/gui/dl-headers-ui.cc +@@ -18,11 +18,9 @@ + */ + + #include +-extern "C" { +- #include +- #include +- #include "gtk-compat.h" +-} ++#include ++#include ++#include "gtk-compat.h" + #include + #include + #include +diff --git a/pan/gui/group-pane.cc b/pan/gui/group-pane.cc +index 28ad581..3ff103e 100644 +--- a/pan/gui/group-pane.cc ++++ b/pan/gui/group-pane.cc +@@ -20,10 +20,8 @@ + #include + #include + #include +-extern "C" { +- #include +- #include "gtk-compat.h" +-} ++#include "gtk-compat.h" ++#include + #include + //#include + #include +diff --git a/pan/gui/group-prefs-dialog.cc b/pan/gui/group-prefs-dialog.cc +index 677b07a..0d7df8b 100644 +--- a/pan/gui/group-prefs-dialog.cc ++++ b/pan/gui/group-prefs-dialog.cc +@@ -18,14 +18,14 @@ + */ + + #include +-extern "C" { +- #include +- #include +- #include "gtk-compat.h" ++#include ++#include + #ifdef HAVE_GTKSPELL ++extern "C" { + #include +-#endif + } ++#endif ++#include "gtk-compat.h" + #include + #include + #include +diff --git a/pan/gui/group-prefs.cc b/pan/gui/group-prefs.cc +index 3e9851b..b06a949 100644 +--- a/pan/gui/group-prefs.cc ++++ b/pan/gui/group-prefs.cc +@@ -21,8 +21,8 @@ extern "C" { + #include + #include // chmod + #include // chmod +- #include + } ++#include + #include + #include + #include +diff --git a/pan/gui/gui.cc b/pan/gui/gui.cc +index f79aa1e..9f8787e 100644 +--- a/pan/gui/gui.cc ++++ b/pan/gui/gui.cc +@@ -25,9 +25,9 @@ + extern "C" { + #include // for chmod + #include // for chmod +- #include + #include + } ++#include + #include + #include + #include +diff --git a/pan/gui/header-pane.cc b/pan/gui/header-pane.cc +index dc65a77..a4a9952 100644 +--- a/pan/gui/header-pane.cc ++++ b/pan/gui/header-pane.cc +@@ -19,10 +19,9 @@ + + extern "C" { + #include +- #include +- #include "gtk-compat.h" +- #include "gtk-compat.h" + } ++#include "gtk-compat.h" ++#include + #include + #include + #include +diff --git a/pan/gui/log-ui.cc b/pan/gui/log-ui.cc +index 7b11493..b204298 100644 +--- a/pan/gui/log-ui.cc ++++ b/pan/gui/log-ui.cc +@@ -21,10 +21,8 @@ + #include + #include + #include +-extern "C" { +- #include +- #include "gtk-compat.h" +-} ++#include "gtk-compat.h" ++#include + #include + #include + #include +diff --git a/pan/gui/pan-file-entry.cc b/pan/gui/pan-file-entry.cc +index 705fc91..c67acf8 100644 +--- a/pan/gui/pan-file-entry.cc ++++ b/pan/gui/pan-file-entry.cc +@@ -19,10 +19,8 @@ + + #include + #include +-extern "C" { +- #include +- #include "gtk-compat.h" +-} ++#include "gtk-compat.h" ++#include + #include + #include "pad.h" + #include "pan-file-entry.h" +diff --git a/pan/gui/pan.cc b/pan/gui/pan.cc +index fb3a696..46c1a5d 100644 +--- a/pan/gui/pan.cc ++++ b/pan/gui/pan.cc +@@ -24,9 +24,6 @@ + #include + + extern "C" { +- #include +- #include "gtk-compat.h" +- #include + #include + #include + #include +@@ -34,6 +31,9 @@ extern "C" { + #include + } + ++#include "gtk-compat.h" ++#include ++#include + #ifdef G_OS_WIN32 + #undef _WIN32_WINNT + #define _WIN32_WINNT 0x0501 +diff --git a/pan/gui/post-ui.cc b/pan/gui/post-ui.cc +index 8769ec5..92c757d 100644 +--- a/pan/gui/post-ui.cc ++++ b/pan/gui/post-ui.cc +@@ -23,14 +23,14 @@ + #include + #include + extern "C" { +- #include +- #include +- #include "gtk-compat.h" + #include + #ifdef HAVE_GTKSPELL + #include + #endif + } ++#include "gtk-compat.h" ++#include ++#include + #include + #include + #include +diff --git a/pan/gui/prefs-file.cc b/pan/gui/prefs-file.cc +index bde7ef3..64c540f 100644 +--- a/pan/gui/prefs-file.cc ++++ b/pan/gui/prefs-file.cc +@@ -24,8 +24,8 @@ + extern "C" { + #include // for chmod + #include // for chmod +- #include + } ++#include + #include + #include "prefs-file.h" + +diff --git a/pan/gui/prefs-ui.cc b/pan/gui/prefs-ui.cc +index f7dc0f0..aac9ec1 100644 +--- a/pan/gui/prefs-ui.cc ++++ b/pan/gui/prefs-ui.cc +@@ -18,10 +18,8 @@ + */ + + #include +-extern "C" { +- #include +- #include "gtk-compat.h" +-} ++#include "gtk-compat.h" ++#include + #include + #include + #include +diff --git a/pan/gui/prefs.cc b/pan/gui/prefs.cc +index fdbd908..64dd8da 100644 +--- a/pan/gui/prefs.cc ++++ b/pan/gui/prefs.cc +@@ -23,10 +23,8 @@ + #include + #include + #include +-extern "C" { +- #include +- #include +-} ++#include ++#include + #include + #include + #include +diff --git a/pan/gui/profiles-dialog.cc b/pan/gui/profiles-dialog.cc +index 26ff029..cf8bd44 100644 +--- a/pan/gui/profiles-dialog.cc ++++ b/pan/gui/profiles-dialog.cc +@@ -23,10 +23,8 @@ + + #include + #include +-extern "C" { +- #include +- #include "gtk-compat.h" +-} ++#include "gtk-compat.h" ++#include + #include + #include + #include +diff --git a/pan/gui/progress-view.cc b/pan/gui/progress-view.cc +index 241ad1c..43ef4f2 100644 +--- a/pan/gui/progress-view.cc ++++ b/pan/gui/progress-view.cc +@@ -18,9 +18,7 @@ + */ + + #include +-extern "C" { +- #include "gtk-compat.h" +-} ++#include "gtk-compat.h" + #include + #include + #include "progress-view.h" +diff --git a/pan/gui/save-attach-ui.cc b/pan/gui/save-attach-ui.cc +index 0b08b6f..0e86a1b 100644 +--- a/pan/gui/save-attach-ui.cc ++++ b/pan/gui/save-attach-ui.cc +@@ -18,10 +18,8 @@ + */ + + #include +-extern "C" { +- #include +- #include "gtk-compat.h" +-} ++#include "gtk-compat.h" ++#include + #include + #include + #include +diff --git a/pan/gui/save-ui.cc b/pan/gui/save-ui.cc +index 0f034e5..1df0cfb 100644 +--- a/pan/gui/save-ui.cc ++++ b/pan/gui/save-ui.cc +@@ -18,10 +18,8 @@ + */ + + #include +-extern "C" { +- #include +- #include "gtk-compat.h" +-} ++#include "gtk-compat.h" ++#include + #include + #include + #include +diff --git a/pan/gui/score-add-ui.cc b/pan/gui/score-add-ui.cc +index e72bdb5..3b81167 100644 +--- a/pan/gui/score-add-ui.cc ++++ b/pan/gui/score-add-ui.cc +@@ -20,9 +20,7 @@ + #include + #include + #include +-extern "C" { +- #include +-} ++#include + #include + #include + #include "hig.h" +diff --git a/pan/gui/score-view-ui.cc b/pan/gui/score-view-ui.cc +index d6c81c1..1327426 100644 +--- a/pan/gui/score-view-ui.cc ++++ b/pan/gui/score-view-ui.cc +@@ -18,10 +18,8 @@ + */ + + #include +-extern "C" { +- #include +- #include "gtk-compat.h" +-} ++#include "gtk-compat.h" ++#include + #include + #include "pad.h" + #include "score-add-ui.h" +diff --git a/pan/gui/server-ui.cc b/pan/gui/server-ui.cc +index b42bc18..268114b 100644 +--- a/pan/gui/server-ui.cc ++++ b/pan/gui/server-ui.cc +@@ -21,11 +21,9 @@ + #include + #include + #include +-extern "C" { +- #include +- #include +- #include "gtk-compat.h" +-} ++#include ++#include ++#include "gtk-compat.h" + + #include + #include +diff --git a/pan/gui/task-pane.cc b/pan/gui/task-pane.cc +index 4f77922..18a8f74 100644 +--- a/pan/gui/task-pane.cc ++++ b/pan/gui/task-pane.cc +@@ -18,11 +18,9 @@ + */ + + #include +-extern "C" { +- #include +- #include +- #include "gtk-compat.h" +-} ++#include ++#include ++#include "gtk-compat.h" + #include + #include + #include +diff --git a/pan/gui/url.cc b/pan/gui/url.cc +index e1173ae..94ffb52 100644 +--- a/pan/gui/url.cc ++++ b/pan/gui/url.cc +@@ -20,10 +20,8 @@ + #include + #include + #include +-extern "C" { +- #include +- #include +-}; ++#include ++#include + #include + #include "url.h" + +diff --git a/pan/tasks/decoder.cc b/pan/tasks/decoder.cc +index b4c21ae..f8cb6db 100644 +--- a/pan/tasks/decoder.cc ++++ b/pan/tasks/decoder.cc +@@ -28,8 +28,8 @@ + extern "C" { + # define PROTOTYPES + # include +-# include + }; ++#include + #include + #include + #include +diff --git a/pan/tasks/encoder.cc b/pan/tasks/encoder.cc +index 7960b84..5989059 100644 +--- a/pan/tasks/encoder.cc ++++ b/pan/tasks/encoder.cc +@@ -31,10 +31,10 @@ + extern "C" { + #define PROTOTYPES + #include +-#include + #include + }; + ++#include + #include + #include + #include +diff --git a/pan/tasks/nntp.cc b/pan/tasks/nntp.cc +index ceb1574..71c5cf1 100644 +--- a/pan/tasks/nntp.cc ++++ b/pan/tasks/nntp.cc +@@ -22,10 +22,8 @@ + #include + #include // abort, atoi, strtoul + #include // snprintf +-extern "C" { +- #include +- #include +-} ++#include ++#include + #include + #include + #include +diff --git a/pan/tasks/nzb.cc b/pan/tasks/nzb.cc +index af890e5..14df6f6 100644 +--- a/pan/tasks/nzb.cc ++++ b/pan/tasks/nzb.cc +@@ -24,9 +24,7 @@ + #include + #include + #include +-extern "C" { +- #include +-} ++#include + #include + #include + #include +diff --git a/pan/tasks/socket-impl-gio.cc b/pan/tasks/socket-impl-gio.cc +index d3339dd..7dc2ec1 100644 +--- a/pan/tasks/socket-impl-gio.cc ++++ b/pan/tasks/socket-impl-gio.cc +@@ -31,9 +31,9 @@ + + extern "C" { + #include +- #include + } + ++#include + #include + #include + #include +diff --git a/pan/tasks/socket-impl-main.cc b/pan/tasks/socket-impl-main.cc +index c33edfd..688183c 100644 +--- a/pan/tasks/socket-impl-main.cc ++++ b/pan/tasks/socket-impl-main.cc +@@ -30,10 +30,7 @@ + //#include + //#include + +-extern "C" +-{ +- #include +-} ++#include + + #include + +diff --git a/pan/tasks/socket-impl-openssl.cc b/pan/tasks/socket-impl-openssl.cc +index b58e074..5b1b0b0 100644 +--- a/pan/tasks/socket-impl-openssl.cc ++++ b/pan/tasks/socket-impl-openssl.cc +@@ -34,13 +34,14 @@ + + extern "C" { + #include +- #include + #include + #include + #include + #include + } + ++#include ++ + #include + #include + #include +diff --git a/pan/tasks/socket-impl-openssl.h b/pan/tasks/socket-impl-openssl.h +index e48cbae..eea41d4 100644 +--- a/pan/tasks/socket-impl-openssl.h ++++ b/pan/tasks/socket-impl-openssl.h +@@ -27,10 +27,7 @@ + #include + //#include + //#include +-extern "C" +-{ +- #include +-} ++#include + + #include + #include +diff --git a/pan/tasks/socket.cc b/pan/tasks/socket.cc +index 78d53fb..2c7a28d 100644 +--- a/pan/tasks/socket.cc ++++ b/pan/tasks/socket.cc +@@ -21,9 +21,7 @@ + #include + #include + #include +-extern "C" { +- #include +-} ++#include + #include + #include + #include "socket.h" +diff --git a/pan/tasks/task-article.cc b/pan/tasks/task-article.cc +index 9c96b7d..1dc17ba 100644 +--- a/pan/tasks/task-article.cc ++++ b/pan/tasks/task-article.cc +@@ -24,10 +24,7 @@ + #include + #include + #include +-extern "C" +-{ +- #include +-} ++#include + #include + #include + #include +diff --git a/pan/tasks/task-groups.cc b/pan/tasks/task-groups.cc +index b8618d6..9b72369 100644 +--- a/pan/tasks/task-groups.cc ++++ b/pan/tasks/task-groups.cc +@@ -20,9 +20,9 @@ + #include + #include + extern "C" { +- #include + #include + } ++#include + #include + #include + #include +diff --git a/pan/tasks/task-post.cc b/pan/tasks/task-post.cc +index bb80fb9..4ab9c2f 100644 +--- a/pan/tasks/task-post.cc ++++ b/pan/tasks/task-post.cc +@@ -18,9 +18,7 @@ + */ + + #include +-extern "C" { +- #include +-} ++#include + #include "task-post.h" + #include + #include +diff --git a/pan/tasks/task-upload.h b/pan/tasks/task-upload.h +index 7bd4fe0..e5377c6 100644 +--- a/pan/tasks/task-upload.h ++++ b/pan/tasks/task-upload.h +@@ -37,10 +37,10 @@ + extern "C" { + #define PROTOTYPES + #include +- #include +- #include + }; + ++#include ++#include + #include + + namespace pan +diff --git a/pan/tasks/task-xover.cc b/pan/tasks/task-xover.cc +index c3c8260..64b41a4 100644 +--- a/pan/tasks/task-xover.cc ++++ b/pan/tasks/task-xover.cc +@@ -26,10 +26,10 @@ extern "C" + #define PROTOTYPES + #include + #include +-#include +-#include + } + ++#include ++#include + #include + #include + #include +diff --git a/pan/tasks/task-xoverinfo.cc b/pan/tasks/task-xoverinfo.cc +index c598bf8..9a9e488 100644 +--- a/pan/tasks/task-xoverinfo.cc ++++ b/pan/tasks/task-xoverinfo.cc +@@ -24,10 +24,10 @@ extern "C" { + #define PROTOTYPES + #include + #include +- #include +- #include + #include + } ++#include ++#include + #include + #include + #include +diff --git a/pan/usenet-utils/filter-info.cc b/pan/usenet-utils/filter-info.cc +index f464428..6b1a5c9 100644 +--- a/pan/usenet-utils/filter-info.cc ++++ b/pan/usenet-utils/filter-info.cc +@@ -18,10 +18,8 @@ + */ + + #include +-extern "C" { +- #include +- #include +-} ++#include ++#include + #include + #include "filter-info.h" + +diff --git a/pan/usenet-utils/gnksa.cc b/pan/usenet-utils/gnksa.cc +index db1f2c4..fb888d5 100644 +--- a/pan/usenet-utils/gnksa.cc ++++ b/pan/usenet-utils/gnksa.cc +@@ -37,10 +37,10 @@ extern "C" + { + #include + #include +- #include + #include + } + ++#include + #include + #include + #include +diff --git a/pan/usenet-utils/gpg.cc b/pan/usenet-utils/gpg.cc +index 4df4525..8755777 100644 +--- a/pan/usenet-utils/gpg.cc ++++ b/pan/usenet-utils/gpg.cc +@@ -28,9 +28,9 @@ extern "C" { + #include + #include + #include +- #include +- #include + } ++#include ++#include + + #ifdef HAVE_GMIME_CRYPTO + +diff --git a/pan/usenet-utils/message-check.cc b/pan/usenet-utils/message-check.cc +index a511556..461ce86 100644 +--- a/pan/usenet-utils/message-check.cc ++++ b/pan/usenet-utils/message-check.cc +@@ -21,9 +21,7 @@ + #include + #include + #include +-extern "C" { + #include +-} + #include + #include + #include +diff --git a/pan/usenet-utils/rules-info.cc b/pan/usenet-utils/rules-info.cc +index 1c03adc..91e78be 100644 +--- a/pan/usenet-utils/rules-info.cc ++++ b/pan/usenet-utils/rules-info.cc +@@ -22,10 +22,8 @@ + + + #include +-extern "C" { +- #include +- #include +-} ++#include ++#include + #include + #include "rules-info.h" + +diff --git a/pan/usenet-utils/scorefile.cc b/pan/usenet-utils/scorefile.cc +index 8b56a2a..4b151f0 100644 +--- a/pan/usenet-utils/scorefile.cc ++++ b/pan/usenet-utils/scorefile.cc +@@ -23,9 +23,7 @@ + #include + #include + #include +-extern "C" { +- #include +-} ++#include + #include + #include + #include +diff --git a/pan/usenet-utils/ssl-utils.h b/pan/usenet-utils/ssl-utils.h +index 2286250..0beb32f 100644 +--- a/pan/usenet-utils/ssl-utils.h ++++ b/pan/usenet-utils/ssl-utils.h +@@ -43,9 +43,7 @@ + #include + #include + #include +-extern "C" { +- #include +-} ++#include + + namespace pan + { +diff --git a/pan/usenet-utils/text-massager.cc b/pan/usenet-utils/text-massager.cc +index 4fcd8d5..15a818b 100644 +--- a/pan/usenet-utils/text-massager.cc ++++ b/pan/usenet-utils/text-massager.cc +@@ -22,9 +22,7 @@ + #include + #include + #include +-extern "C" { + #include +-} + #include "text-massager.h" + #include + #include diff --git a/third_party/nixpkgs/pkgs/applications/networking/nextcloud-client/default.nix b/third_party/nixpkgs/pkgs/applications/networking/nextcloud-client/default.nix index db01ec014e..8635b882fc 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/nextcloud-client/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/nextcloud-client/default.nix @@ -16,17 +16,18 @@ , qtquickcontrols2 , qtgraphicaleffects , sqlite +, inkscape }: mkDerivation rec { pname = "nextcloud-client"; - version = "3.2.2"; + version = "3.2.3"; src = fetchFromGitHub { owner = "nextcloud"; repo = "desktop"; rev = "v${version}"; - sha256 = "sha256-UPWr5P6oEBtDK/Cuz8nZlHqKFyGEf44vbMfrphxNkMU="; + sha256 = "sha256-NE0P6bG/msoP29c/1r/fTC5vDcqgkQuqfRK+IDftMqY="; }; patches = [ @@ -37,6 +38,7 @@ mkDerivation rec { nativeBuildInputs = [ pkg-config cmake + inkscape ]; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/networking/p2p/qbittorrent/default.nix b/third_party/nixpkgs/pkgs/applications/networking/p2p/qbittorrent/default.nix index 4c0d391cca..bd4fafed11 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/p2p/qbittorrent/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/p2p/qbittorrent/default.nix @@ -12,15 +12,17 @@ assert trackerSearch -> (python3 != null); with lib; mkDerivation rec { pname = "qbittorrent"; - version = "4.3.3"; + version = "4.3.5"; src = fetchFromGitHub { owner = "qbittorrent"; - repo = "qbittorrent"; + repo = "qBittorrent"; rev = "release-${version}"; - sha256 = "0y8vrvfv8n6zg6pgg5a9hmvxi2z9rrfd9k8zv04nv5js91b99ncq"; + sha256 = "1vdk42f8rxffyfydjk5cgzg5gl88ng2pynlyxw5ajh08wvkkjzgy"; }; + enableParallelBuilding = true; + # NOTE: 2018-05-31: CMake is working but it is not officially supported nativeBuildInputs = [ makeWrapper pkg-config ]; @@ -47,7 +49,8 @@ mkDerivation rec { meta = { description = "Featureful free software BitTorrent client"; homepage = "https://www.qbittorrent.org/"; - license = licenses.gpl2; + changelog = "https://github.com/qbittorrent/qBittorrent/blob/release-${version}/Changelog"; + license = licenses.gpl2Plus; platforms = platforms.linux; maintainers = with maintainers; [ Anton-Latukha ]; }; diff --git a/third_party/nixpkgs/pkgs/applications/networking/p2p/transgui/default.nix b/third_party/nixpkgs/pkgs/applications/networking/p2p/transgui/default.nix index ceccf44819..0a2f90ecb7 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/p2p/transgui/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/p2p/transgui/default.nix @@ -29,6 +29,7 @@ stdenv.mkDerivation rec { ''; preBuild = '' + FPCDIR=${fpc}/lib/fpc/${fpc.version} fpcmake -w lazbuild -B transgui.lpr --lazarusdir=${lazarus}/share/lazarus ''; diff --git a/third_party/nixpkgs/pkgs/applications/networking/p2p/zeronet/default.nix b/third_party/nixpkgs/pkgs/applications/networking/p2p/zeronet/default.nix index 4440b24a2b..19da740938 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/p2p/zeronet/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/p2p/zeronet/default.nix @@ -13,7 +13,7 @@ python3Packages.buildPythonApplication rec { }; propagatedBuildInputs = with python3Packages; [ - gevent msgpack base58 merkletools rsa pysocks pyasn1 websocket_client + gevent msgpack base58 merkletools rsa pysocks pyasn1 websocket-client gevent-websocket rencode bitcoinlib maxminddb pyopenssl ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/pcloud/default.nix b/third_party/nixpkgs/pkgs/applications/networking/pcloud/default.nix index bd9371fff1..e1936bf06a 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/pcloud/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/pcloud/default.nix @@ -21,19 +21,19 @@ # Runtime dependencies; # A few additional ones (e.g. Node) are already shipped together with the # AppImage, so we don't have to duplicate them here. - alsaLib, dbus-glib, fuse, gnome, gtk3, libdbusmenu-gtk2, libXdamage, nss, udev + alsa-lib, dbus-glib, fuse, gnome, gtk3, libdbusmenu-gtk2, libXdamage, nss, udev }: let pname = "pcloud"; - version = "1.9.2"; - code = "XZCBKnXZdbHEAu1ec7bMDQCb1oCztBc169Py"; + version = "1.9.3"; + code = "XZh0QTXZIYkI66plpzLAJ4G2mwDvJFvKvEzy"; name = "${pname}-${version}"; # Archive link's code thanks to: https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=pcloud-drive src = fetchzip { url = "https://api.pcloud.com/getpubzip?code=${code}&filename=${name}.zip"; - hash = "sha256-9I4xl9cO1MDvdXaTv6ER/NPdqKoo0y7HNWxGl0Fn1O0="; + hash = "sha256-NFbSYZRysRIg6q0aaDocpK7xJbiCWc1S0McXKlCRGjU="; }; appimageContents = appimageTools.extractType2 { @@ -54,7 +54,7 @@ in stdenv.mkDerivation { ]; buildInputs = [ - alsaLib + alsa-lib dbus-glib fuse gtk3 diff --git a/third_party/nixpkgs/pkgs/applications/networking/pjsip/default.nix b/third_party/nixpkgs/pkgs/applications/networking/pjsip/default.nix index dc7b0b0a4c..84e52128b6 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/pjsip/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/pjsip/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, openssl, libsamplerate, alsaLib, AppKit }: +{ lib, stdenv, fetchFromGitHub, openssl, libsamplerate, alsa-lib, AppKit }: stdenv.mkDerivation rec { pname = "pjsip"; @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ openssl libsamplerate ] - ++ lib.optional stdenv.isLinux alsaLib + ++ lib.optional stdenv.isLinux alsa-lib ++ lib.optional stdenv.isDarwin AppKit; preConfigure = '' diff --git a/third_party/nixpkgs/pkgs/applications/networking/powerdns-admin/default.nix b/third_party/nixpkgs/pkgs/applications/networking/powerdns-admin/default.nix index 4ef89e2616..9dba30e3d8 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/powerdns-admin/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/powerdns-admin/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, mkYarnPackage, writeText, python3Packages }: +{ lib, stdenv, fetchFromGitHub, mkYarnPackage, writeText, python3 }: let version = "0.2.3"; @@ -9,10 +9,22 @@ let sha256 = "16faz57d77mxkflkvwyi8gb9wvnq2vhw79b84v1fmqvxri1yaphw"; }; - pythonDeps = with python3Packages; [ + python = python3.override { + packageOverrides = self: super: { + dnspython = super.dnspython.overridePythonAttrs (oldAttrs: rec { + version = "1.16.0"; + src = oldAttrs.src.override { + inherit version; + sha256 = "36c5e8e38d4369a08b6780b7f27d790a292b2b08eea01607865bf0936c558e01"; + }; + }); + }; + }; + + pythonDeps = with python.pkgs; [ flask flask_assets flask_login flask_sqlalchemy flask_migrate flask-seasurf flask_mail flask-sslify mysqlclient sqlalchemy - configobj bcrypt requests ldap pyotp qrcode dnspython_1 + configobj bcrypt requests ldap pyotp qrcode dnspython gunicorn python3-saml pyopenssl pytz cssmin jsmin authlib bravado-core lima pytimeparse pyyaml ]; @@ -64,7 +76,7 @@ in stdenv.mkDerivation rec { inherit src version; - nativeBuildInputs = [ python3Packages.wrapPython ]; + nativeBuildInputs = [ python.pkgs.wrapPython ]; pythonPath = pythonDeps; @@ -96,7 +108,7 @@ in stdenv.mkDerivation rec { echo "$gunicornScript" > $out/bin/powerdns-admin chmod +x $out/bin/powerdns-admin wrapProgram $out/bin/powerdns-admin \ - --set PATH ${python3Packages.python}/bin \ + --set PATH ${python.pkgs.python}/bin \ --set PYTHONPATH $out/share:$program_PYTHONPATH runHook postInstall diff --git a/third_party/nixpkgs/pkgs/applications/networking/remote/anydesk/default.nix b/third_party/nixpkgs/pkgs/applications/networking/remote/anydesk/default.nix index 4a741ab2b1..890553b338 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/remote/anydesk/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/remote/anydesk/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, makeWrapper, makeDesktopItem, genericUpdater, writeShellScript , atk, cairo, gdk-pixbuf, glib, gnome2, gtk2, libGLU, libGL, pango, xorg, minizip -, lsb-release, freetype, fontconfig, polkit, polkit_gnome +, lsb-release, freetype, fontconfig, polkit, polkit_gnome, pciutils , pulseaudio }: let @@ -76,7 +76,7 @@ in stdenv.mkDerivation rec { $out/bin/anydesk wrapProgram $out/bin/anydesk \ - --prefix PATH : ${lib.makeBinPath [ lsb-release ]} + --prefix PATH : ${lib.makeBinPath [ lsb-release pciutils ]} substituteInPlace $out/share/applications/*.desktop \ --subst-var out diff --git a/third_party/nixpkgs/pkgs/applications/networking/remote/aws-workspaces/default.nix b/third_party/nixpkgs/pkgs/applications/networking/remote/aws-workspaces/default.nix index 3451cbb129..9efaa18e31 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/remote/aws-workspaces/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/remote/aws-workspaces/default.nix @@ -5,15 +5,15 @@ stdenv.mkDerivation rec { pname = "aws-workspaces"; - version = "3.1.5.1105"; + version = "3.1.8.1198"; src = fetchurl { # ref https://d3nt0h4h6pmmc4.cloudfront.net/ubuntu/dists/bionic/main/binary-amd64/Packages urls = [ "https://d3nt0h4h6pmmc4.cloudfront.net/ubuntu/dists/bionic/main/binary-amd64/workspacesclient_${version}_amd64.deb" - "https://web.archive.org/web/20210411145948/https://d3nt0h4h6pmmc4.cloudfront.net/ubuntu/dists/bionic/main/binary-amd64/workspacesclient_${version}_amd64.deb" + "https://web.archive.org/web/20210626165043/https://d3nt0h4h6pmmc4.cloudfront.net/ubuntu/dists/bionic/main/binary-amd64/workspacesclient_${version}_amd64.deb" ]; - sha256 = "08c8912502d27e61cc2399bf99947e26c1daa1f317d5aa8cc7348d7bf8734e1b"; + sha256 = "e784bc4401c2ffaf19f3cc42cb6c6f229c73adba36df49093a1d8cd30c86aaf0"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/networking/remote/citrix-workspace/generic.nix b/third_party/nixpkgs/pkgs/applications/networking/remote/citrix-workspace/generic.nix index 8a96cf8475..506f129d35 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/remote/citrix-workspace/generic.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/remote/citrix-workspace/generic.nix @@ -1,5 +1,5 @@ { lib, stdenv, requireFile, makeWrapper, autoPatchelfHook, wrapGAppsHook, which, more -, file, atk, alsaLib, cairo, fontconfig, gdk-pixbuf, glib, gnome, gtk2-x11, gtk3 +, file, atk, alsa-lib, cairo, fontconfig, gdk-pixbuf, glib, gnome, gtk2-x11, gtk3 , heimdal, krb5, libsoup, libvorbis, speex, openssl, zlib, xorg, pango, gtk2 , gnome2, mesa, nss, nspr, gtk_engines, freetype, dconf, libpng12, libxml2 , libjpeg, libredirect, tzdata, cacert, systemd, libcxxabi, libcxx, e2fsprogs, symlinkJoin @@ -62,7 +62,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib atk cairo dconf diff --git a/third_party/nixpkgs/pkgs/applications/networking/remote/freerdp/default.nix b/third_party/nixpkgs/pkgs/applications/networking/remote/freerdp/default.nix index 8e0f4dde81..942090f2bd 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/remote/freerdp/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/remote/freerdp/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchFromGitHub, cmake, pkg-config, alsaLib, ffmpeg, glib, openssl +{ stdenv, lib, fetchFromGitHub, cmake, pkg-config, alsa-lib, ffmpeg, glib, openssl , pcre, zlib, libX11, libXcursor, libXdamage, libXext, libXi, libXinerama , libXrandr, libXrender, libXv, libXtst, libxkbcommon, libxkbfile, wayland , gstreamer, gst-plugins-base, gst-plugins-good, libunwind, orc, libxslt, cairo @@ -49,7 +49,7 @@ in stdenv.mkDerivation rec { buildInputs = with lib; [ - alsaLib + alsa-lib cairo cups ffmpeg diff --git a/third_party/nixpkgs/pkgs/applications/networking/remote/vmware-horizon-client/default.nix b/third_party/nixpkgs/pkgs/applications/networking/remote/vmware-horizon-client/default.nix index 48ea229c24..7c6e46c137 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/remote/vmware-horizon-client/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/remote/vmware-horizon-client/default.nix @@ -39,19 +39,19 @@ , zlib }: let - version = "2012"; + version = "2103"; sysArch = if stdenv.hostPlatform.system == "x86_64-linux" then "x64" else throw "Unsupported system: ${stdenv.hostPlatform.system}"; - # The downloaded archive also contains i386 and ARM binaries, but these have not been tested. + # The downloaded archive also contains ARM binaries, but these have not been tested. vmwareHorizonClientFiles = stdenv.mkDerivation { name = "vmwareHorizonClientFiles"; inherit version; src = fetchurl { - url = "https://download3.vmware.com/software/view/viewclients/CART21FQ4/VMware-Horizon-Client-Linux-2012-8.1.0-17349998.tar.gz"; - sha256 = "0afda1f3116e75a4e7f89990d8ee60ccea5f3bb8a2360652162fa11c795724ce"; + url = "https://download3.vmware.com/software/view/viewclients/CART22FQ1/VMware-Horizon-Client-Linux-2103-8.2.0-17742757.tar.gz"; + sha256 = "62f95bb802b058a98f5ee6c2296b89bd7e15884a24dc8a8ba7ce89de7e0798e4"; }; nativeBuildInputs = [ makeWrapper ]; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/networking/remote/x2goclient/default.nix b/third_party/nixpkgs/pkgs/applications/networking/remote/x2goclient/default.nix index 4156c82f91..d40d8032c2 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/remote/x2goclient/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/remote/x2goclient/default.nix @@ -1,20 +1,20 @@ -{ lib, fetchgit, cups, libssh, libXpm, nx-libs, openldap, openssh +{ lib, fetchurl, cups, libssh, libXpm, nx-libs, openldap, openssh , mkDerivation, qtbase, qtsvg, qtx11extras, qttools, phonon, pkg-config }: -mkDerivation { +mkDerivation rec { pname = "x2goclient"; - version = "unstable-2019-07-24"; + version = "4.1.2.2"; - src = fetchgit { - url = "git://code.x2go.org/x2goclient.git"; - rev = "704c4ab92d20070dd160824c9b66a6d1c56dcc49"; - sha256 = "1pndp3lfzwifyxqq0gps3p1bwakw06clbk6n8viv020l4bsfmq5f"; + src = fetchurl { + url = "https://code.x2go.org/releases/source/${pname}/${pname}-${version}.tar.gz"; + sha256 = "yZUyZ8QPpnEZrZanO6yx8mYZbaIFnwzc0bjVGZQh0So="; }; buildInputs = [ cups libssh libXpm nx-libs openldap openssh qtbase qtsvg qtx11extras qttools phonon pkg-config ]; postPatch = '' + substituteInPlace src/onmainwindow.cpp --replace "/usr/sbin/sshd" "${openssh}/bin/sshd" substituteInPlace Makefile \ --replace "SHELL=/bin/bash" "SHELL=$SHELL" \ --replace "lrelease-qt4" "${qttools.dev}/bin/lrelease" \ @@ -33,6 +33,7 @@ mkDerivation { meta = with lib; { description = "Graphical NoMachine NX3 remote desktop client"; homepage = "http://x2go.org/"; + maintainers = with maintainers; [ mkg20001 ]; license = licenses.gpl2; platforms = platforms.linux; }; diff --git a/third_party/nixpkgs/pkgs/applications/networking/remote/x2goserver/default.nix b/third_party/nixpkgs/pkgs/applications/networking/remote/x2goserver/default.nix index 0b8e858d25..6d7923872e 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/remote/x2goserver/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/remote/x2goserver/default.nix @@ -8,8 +8,8 @@ let version = "4.1.0.3"; src = fetchurl { - url = "http://code.x2go.org/releases/source/x2goserver/${pname}-${version}.tar.gz"; - sha256 = "1l6wd708kbipib4ldprfiihqmj4895nifg0bkws4x97majislxk7"; + url = "https://code.x2go.org/releases/source/${pname}/${pname}-${version}.tar.gz"; + sha256 = "Z3aqo1T1pE40nws8F21JiMiKYYwu30bJijeuicBp3NA="; }; x2go-perl = perlPackages.buildPerlPackage rec { @@ -26,7 +26,7 @@ let }; perlEnv = perl.withPackages (p: with p; [ - x2go-perl DBI DBDSQLite FileBaseDir TryTiny CaptureTiny ConfigSimple Switch + x2go-perl DBI DBDSQLite FileBaseDir TryTiny CaptureTiny ConfigSimple Switch FileWhich ]); binaryDeps = [ @@ -88,6 +88,6 @@ stdenv.mkDerivation rec { homepage = "http://x2go.org/"; platforms = lib.platforms.linux; license = licenses.gpl2; - maintainers = [ maintainers.averelld ]; + maintainers = with maintainers; [ averelld mkg20001 ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/shellhub-agent/default.nix b/third_party/nixpkgs/pkgs/applications/networking/shellhub-agent/default.nix index 7a8f35b76b..7ecb8936a6 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/shellhub-agent/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/shellhub-agent/default.nix @@ -9,18 +9,18 @@ buildGoModule rec { pname = "shellhub-agent"; - version = "0.7.0"; + version = "0.7.1"; src = fetchFromGitHub { owner = "shellhub-io"; repo = "shellhub"; rev = "v${version}"; - sha256 = "07gfi0l9l19cy7304v18knbfhs7zqhfglw0jjhcmxa79dg6wzdia"; + sha256 = "0fgkjv7p2p0k58ifs77qfy0ni2yhrmk8rqyysjxq0im6j3f3az11"; }; modRoot = "./agent"; - vendorSha256 = "0rcb384yxk1dsip15qh32rkd07i2zzr1k53wcfpnrgi6jpixvsvi"; + vendorSha256 = "1avl5xvav9y2vni5w3ksvrcz67x2kkadqw9p1cfq5rkjny1c2jrg"; buildFlagsArray = [ "-ldflags=-s -w -X main.AgentVersion=v${version}" ]; diff --git a/third_party/nixpkgs/pkgs/applications/networking/sync/onedrive/default.nix b/third_party/nixpkgs/pkgs/applications/networking/sync/onedrive/default.nix index b7e9f220f0..d53464df7a 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/sync/onedrive/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/sync/onedrive/default.nix @@ -1,22 +1,34 @@ -{ stdenv, lib, fetchFromGitHub, autoreconfHook, ldc, installShellFiles, pkg-config -, curl, sqlite, libnotify -, withSystemd ? stdenv.isLinux, systemd ? null }: +{ stdenv +, lib +, fetchFromGitHub +, autoreconfHook +, ldc +, installShellFiles +, pkg-config +, curl +, sqlite +, libnotify +, withSystemd ? stdenv.isLinux +, systemd +}: stdenv.mkDerivation rec { pname = "onedrive"; - version = "2.4.11"; + version = "2.4.12"; src = fetchFromGitHub { owner = "abraunegg"; repo = pname; rev = "v${version}"; - sha256 = "sha256-ioOrkhVeHHqIjoEXcYo8ATJW+2+nZOehf3XbAJUEXpY="; + sha256 = "sha256-rG9W90+wGLnhnfhqJjUIFGP6ZcmaxGkrdhPxQVRyxoc="; }; nativeBuildInputs = [ autoreconfHook ldc installShellFiles pkg-config ]; buildInputs = [ - curl sqlite libnotify + curl + sqlite + libnotify ] ++ lib.optional withSystemd systemd; configureFlags = [ @@ -36,8 +48,8 @@ stdenv.mkDerivation rec { meta = with lib; { description = "A complete tool to interact with OneDrive on Linux"; homepage = "https://github.com/abraunegg/onedrive"; - license = licenses.gpl3; - maintainers = with maintainers; [ srgom ianmjones ]; + license = licenses.gpl3Only; + maintainers = with maintainers; [ srgom peterhoeg ]; platforms = platforms.linux; }; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/sync/rsync/default.nix b/third_party/nixpkgs/pkgs/applications/networking/sync/rsync/default.nix index a38352a328..54417e6ef4 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/sync/rsync/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/sync/rsync/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, perl, libiconv, zlib, popt -, enableACLs ? !(stdenv.isDarwin || stdenv.isSunOS || stdenv.isFreeBSD), acl ? null +, enableACLs ? lib.meta.availableOn stdenv.hostPlatform acl, acl ? null , enableLZ4 ? true, lz4 ? null , enableOpenSSL ? true, openssl ? null , enableXXHash ? true, xxHash ? null diff --git a/third_party/nixpkgs/pkgs/applications/networking/sync/unison/default.nix b/third_party/nixpkgs/pkgs/applications/networking/sync/unison/default.nix index 23bbd19b00..9ab8d44150 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/sync/unison/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/sync/unison/default.nix @@ -1,4 +1,4 @@ -{lib, stdenv, fetchFromGitHub, ocamlPackages, fontschumachermisc, xset, makeWrapper, ncurses, gnugrep +{lib, stdenv, fetchFromGitHub, ocamlPackages, fontschumachermisc, xset, makeWrapper, ncurses, gnugrep, fetchpatch , enableX11 ? true}: let inherit (ocamlPackages) ocaml lablgtk; in @@ -17,6 +17,16 @@ stdenv.mkDerivation (rec { nativeBuildInputs = [ makeWrapper ]; buildInputs = [ ocaml ncurses ]; + patches = [ + # Patch to fix build with ocaml 4.12. Remove in 2.51.4 + # https://github.com/bcpierce00/unison/pull/481 + (fetchpatch { + name = "fix-compile-with-ocaml-4.12.patch"; + url = "https://github.com/bcpierce00/unison/commit/14b885316e0a4b41cb80fe3daef7950f88be5c8f.patch?full_index=1"; + sha256 = "0j1rma1cwdsfql19zvzhfj2ys5c4lbhjcp6jrnck04xnckxxiy3d"; + }) + ]; + preBuild = (if enableX11 then '' sed -i "s|\(OCAMLOPT=.*\)$|\1 -I $(echo "${lablgtk}"/lib/ocaml/*/site-lib/lablgtk2)|" src/Makefile.OCaml '' else "") + '' diff --git a/third_party/nixpkgs/pkgs/applications/networking/testssl/default.nix b/third_party/nixpkgs/pkgs/applications/networking/testssl/default.nix index b4d17a1a49..3abc0458a0 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/testssl/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/testssl/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "testssl.sh"; - version = "3.0.4"; + version = "3.0.5"; src = fetchFromGitHub { owner = "drwetter"; repo = pname; rev = version; - sha256 = "sha256-Rcvkzw1DfoRXrk0vlpL6CojEHYfYga3voc2hm4qxdmw="; + sha256 = "sha256-p2jPpPHtOOmv0CCsXOECgMT9sqa4ZykcJwuGOSkYLaY="; }; nativeBuildInputs = [ makeWrapper ]; @@ -43,7 +43,7 @@ stdenv.mkDerivation rec { TLS/SSL ciphers, protocols as well as recent cryptographic flaws and more. ''; homepage = "https://testssl.sh/"; - license = licenses.gpl2; + license = licenses.gpl2Only; maintainers = with maintainers; [ etu ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/networking/twtxt/default.nix b/third_party/nixpkgs/pkgs/applications/networking/twtxt/default.nix index ff6e61c614..27420f8bd3 100644 --- a/third_party/nixpkgs/pkgs/applications/networking/twtxt/default.nix +++ b/third_party/nixpkgs/pkgs/applications/networking/twtxt/default.nix @@ -1,23 +1,31 @@ -{ lib, fetchFromGitHub, buildGoModule }: +{ lib, fetchFromGitHub, buildPythonApplication, aiohttp, python-dateutil, humanize, click, pytestCheckHook, tox }: -buildGoModule rec { +buildPythonApplication rec { pname = "twtxt"; - version = "0.1.0"; + version = "1.2.3"; src = fetchFromGitHub { - owner = "jointwt"; + owner = "buckket"; repo = pname; - rev = version; - sha256 = "15jhfnhpk34nmad04f7xz1w041dba8cn17hq46p9n5sarjgkjiiw"; + rev = "v${version}"; + sha256 = "sha256-AdM95G2Vz3UbVPI7fs8/D78BMxscbTGrCpIyyHzSmho="; }; - vendorSha256 = "1lnf8wd2rv9d292rp8jndfdg0rjs6gfw0yg49l9spw4yzifnd7f7"; + # Relax some dependencies + postPatch = '' + substituteInPlace setup.py \ + --replace 'aiohttp>=2.2.5,<3' 'aiohttp' \ + --replace 'click>=6.7,<7' 'click' \ + --replace 'humanize>=0.5.1,<1' 'humanize' + ''; - subPackages = [ "cmd/twt" "cmd/twtd" ]; + propagatedBuildInputs = [ aiohttp python-dateutil humanize click ]; + + checkInputs = [ pytestCheckHook tox ]; meta = with lib; { - description = "Self-hosted, Twitter-like decentralised microblogging platform"; - homepage = "https://github.com/jointwt/twtxt"; + description = "Decentralised, minimalist microblogging service for hackers"; + homepage = "https://github.com/buckket/twtxt"; license = licenses.mit; maintainers = with maintainers; [ siraben ]; }; diff --git a/third_party/nixpkgs/pkgs/applications/office/espanso/default.nix b/third_party/nixpkgs/pkgs/applications/office/espanso/default.nix index 5cbfa5b1b2..adeb087ae8 100644 --- a/third_party/nixpkgs/pkgs/applications/office/espanso/default.nix +++ b/third_party/nixpkgs/pkgs/applications/office/espanso/default.nix @@ -10,6 +10,7 @@ , openssl , xclip , xdotool +, makeWrapper }: rustPlatform.buildRustPackage rec { @@ -28,6 +29,7 @@ rustPlatform.buildRustPackage rec { nativeBuildInputs = [ extra-cmake-modules pkg-config + makeWrapper ]; buildInputs = [ @@ -35,6 +37,7 @@ rustPlatform.buildRustPackage rec { libXtst libXi libnotify + xclip openssl xdotool ]; @@ -42,6 +45,11 @@ rustPlatform.buildRustPackage rec { # Some tests require networking doCheck = false; + postInstall = '' + wrapProgram $out/bin/espanso \ + --prefix PATH : ${lib.makeBinPath [ libnotify xclip ]} + ''; + meta = with lib; { description = "Cross-platform Text Expander written in Rust"; homepage = "https://espanso.org"; diff --git a/third_party/nixpkgs/pkgs/applications/office/gnumeric/default.nix b/third_party/nixpkgs/pkgs/applications/office/gnumeric/default.nix index aacc2a2a57..5ab9be9fa7 100644 --- a/third_party/nixpkgs/pkgs/applications/office/gnumeric/default.nix +++ b/third_party/nixpkgs/pkgs/applications/office/gnumeric/default.nix @@ -7,11 +7,11 @@ let inherit (python3Packages) python pygobject3; in stdenv.mkDerivation rec { pname = "gnumeric"; - version = "1.12.49"; + version = "1.12.50"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "kcBy7JXDLgCxVv/oAVyTsyuO3zaPkEFDYZPPoy6E7Vc="; + sha256 = "dYgZuhvWmDgp+efG1xp/ogzXWjZSonHluwA9XYvMFLg="; }; configureFlags = [ "--disable-component" ]; diff --git a/third_party/nixpkgs/pkgs/applications/office/jabref/default.nix b/third_party/nixpkgs/pkgs/applications/office/jabref/default.nix index 4eb39f4d1f..b87e74c256 100644 --- a/third_party/nixpkgs/pkgs/applications/office/jabref/default.nix +++ b/third_party/nixpkgs/pkgs/applications/office/jabref/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, makeWrapper, makeDesktopItem, wrapGAppsHook, gtk3, gsettings-desktop-schemas -, zlib , libX11, libXext, libXi, libXrender, libXtst, libGL, alsaLib, cairo, freetype, pango, gdk-pixbuf, glib }: +, zlib , libX11, libXext, libXi, libXrender, libXtst, libGL, alsa-lib, cairo, freetype, pango, gdk-pixbuf, glib }: stdenv.mkDerivation rec { version = "5.1"; @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ makeWrapper wrapGAppsHook ]; buildInputs = [ gsettings-desktop-schemas ] ++ systemLibs; - systemLibs = [ gtk3 zlib libX11 libXext libXi libXrender libXtst libGL alsaLib cairo freetype pango gdk-pixbuf glib ]; + systemLibs = [ gtk3 zlib libX11 libXext libXi libXrender libXtst libGL alsa-lib cairo freetype pango gdk-pixbuf glib ]; systemLibPaths = lib.makeLibraryPath systemLibs; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/office/ledger-autosync/default.nix b/third_party/nixpkgs/pkgs/applications/office/ledger-autosync/default.nix index 74fcf1af8f..4f992c3ebe 100644 --- a/third_party/nixpkgs/pkgs/applications/office/ledger-autosync/default.nix +++ b/third_party/nixpkgs/pkgs/applications/office/ledger-autosync/default.nix @@ -1,23 +1,27 @@ -{ lib, python3Packages, fetchFromGitHub, ledger, hledger, useLedger ? true, useHledger ? true }: +{ lib +, python3Packages +, fetchFromGitHub +, ledger +, hledger +, useLedger ? true +, useHledger ? true +}: python3Packages.buildPythonApplication rec { pname = "ledger-autosync"; - version = "unstable-2021-04-01"; + version = "1.0.3"; + format = "pyproject"; # no tests included in PyPI tarball src = fetchFromGitHub { owner = "egh"; repo = "ledger-autosync"; - rev = "0b674c57c833f75b1a36d8caf78e1567c8e2180c"; - sha256 = "0q404gr85caib5hg83cnmgx4684l72w9slxyxrwsiwhlf7gm443q"; + rev = "v${version}"; + sha256 = "0n3y4qxsv1cyvyap95h3rj4bj1sinyfgsajygm7s8di3j5aabqr2"; }; - patches = [ - # ledger-autosync specifies an URL for its ofxparse - # dependency. This patch removes the URL to only use the - # `ofxparse` name. This works because nixpkgs' version of ofxparse - # is more recent than the latest release. - ./fix-ofxparse-dependency.patch + nativeBuildInputs = with python3Packages; [ + poetry-core ]; propagatedBuildInputs = with python3Packages; [ @@ -45,10 +49,14 @@ python3Packages.buildPythonApplication rec { # Checks require ledger as a python package, # ledger does not support python3 while ledger-autosync requires it. - checkInputs = with python3Packages; [ ledger hledger nose mock ]; - checkPhase = '' - nosetests -a generic -a ledger -a hledger - ''; + checkInputs = with python3Packages; [ ledger hledger nose mock pytestCheckHook ]; + + # Disable some non-passing tests: + # https://github.com/egh/ledger-autosync/issues/127 + disabledTests = [ + "test_payee_match" + "test_args_only" + ]; meta = with lib; { homepage = "https://github.com/egh/ledger-autosync"; diff --git a/third_party/nixpkgs/pkgs/applications/office/ledger-autosync/fix-ofxparse-dependency.patch b/third_party/nixpkgs/pkgs/applications/office/ledger-autosync/fix-ofxparse-dependency.patch deleted file mode 100644 index cb12ba9f33..0000000000 --- a/third_party/nixpkgs/pkgs/applications/office/ledger-autosync/fix-ofxparse-dependency.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/setup.py b/setup.py -index eda6db5..ed6b90b 100644 ---- a/setup.py -+++ b/setup.py -@@ -38,7 +38,7 @@ setup( - install_requires=[ - 'setuptools>=26', - 'ofxclient', -- "ofxparse @ https://github.com/jseutter/ofxparse/tarball/3236cfd96434feb6bc79a8b66f3400f18e2ad3c4" -+ 'ofxparse' - ], - - extras_require={ \ No newline at end of file diff --git a/third_party/nixpkgs/pkgs/applications/office/libreoffice/src-fresh/download.nix b/third_party/nixpkgs/pkgs/applications/office/libreoffice/src-fresh/download.nix index f6243476f1..98070994fa 100644 --- a/third_party/nixpkgs/pkgs/applications/office/libreoffice/src-fresh/download.nix +++ b/third_party/nixpkgs/pkgs/applications/office/libreoffice/src-fresh/download.nix @@ -476,11 +476,11 @@ md5name = "b24890e2bb46e12e72a79f7e965f409f4e16466d00e1dd15d93d73ee6b592523-libjpeg-turbo-1.5.3.tar.gz"; } { - name = "language-subtag-registry-2020-12-18.tar.bz2"; - url = "https://dev-www.libreoffice.org/src/language-subtag-registry-2020-12-18.tar.bz2"; - sha256 = "62ce680d5db0f28001b64bd57db47f388c13629cdefc9af8e8af0fbe93689ba1"; + name = "language-subtag-registry-2021-03-05.tar.bz2"; + url = "https://dev-www.libreoffice.org/src/language-subtag-registry-2021-03-05.tar.bz2"; + sha256 = "ce80e8face06bf2ada363e0c159e3f990c4116fdae9232ca43e6369aa82bf16a"; md5 = ""; - md5name = "62ce680d5db0f28001b64bd57db47f388c13629cdefc9af8e8af0fbe93689ba1-language-subtag-registry-2020-12-18.tar.bz2"; + md5name = "ce80e8face06bf2ada363e0c159e3f990c4116fdae9232ca43e6369aa82bf16a-language-subtag-registry-2021-03-05.tar.bz2"; } { name = "JLanguageTool-1.7.0.tar.bz2"; diff --git a/third_party/nixpkgs/pkgs/applications/office/libreoffice/src-fresh/primary.nix b/third_party/nixpkgs/pkgs/applications/office/libreoffice/src-fresh/primary.nix index 3870c478c8..2e1a4b1d78 100644 --- a/third_party/nixpkgs/pkgs/applications/office/libreoffice/src-fresh/primary.nix +++ b/third_party/nixpkgs/pkgs/applications/office/libreoffice/src-fresh/primary.nix @@ -8,7 +8,7 @@ rec { major = "7"; minor = "1"; - patch = "3"; + patch = "4"; tweak = "2"; subdir = "${major}.${minor}.${patch}"; @@ -17,13 +17,13 @@ rec { src = fetchurl { url = "https://download.documentfoundation.org/libreoffice/src/${subdir}/libreoffice-${version}.tar.xz"; - sha256 = "1gr9c8kv7nc9kaag1sw9r36843pfba1my80afx7p0lxj0k8pzbrm"; + sha256 = "1jsskhnlyra7q6d12kkc8dxq5fgrnd8grl32bdck7j9hkwv6d13m"; }; # FIXME rename translations = fetchSrc { name = "translations"; - sha256 = "09xkr6jmnwq55savw9xjsy8l8zcyflnsg4nfwhknvm3ls8sqj4w6"; + sha256 = "0cslzhp5ic1w7hnl6wbyxrxhczdmap1g1hh1nj9sgpw9iqdryqj7"; }; # the "dictionaries" archive is not used for LO build because we already build hunspellDicts packages from @@ -31,6 +31,6 @@ rec { help = fetchSrc { name = "help"; - sha256 = "0dc981vmxfdwlyfgq84axkr99d8chm1ypknj39v0cmaqn56lpwg0"; + sha256 = "091yhm1qkxgvv130a1yzmmikchvxvp8109mcdrlpybp4gc276l8q"; }; } diff --git a/third_party/nixpkgs/pkgs/applications/office/mendeley/default.nix b/third_party/nixpkgs/pkgs/applications/office/mendeley/default.nix index b38b7e0e58..3b9963d8db 100644 --- a/third_party/nixpkgs/pkgs/applications/office/mendeley/default.nix +++ b/third_party/nixpkgs/pkgs/applications/office/mendeley/default.nix @@ -1,6 +1,6 @@ { fetchurl, lib, stdenv, mkDerivation, dpkg, which , makeWrapper -, alsaLib +, alsa-lib , desktop-file-utils , dbus , libcap @@ -59,7 +59,7 @@ let qtquickcontrols qtwebkit qtwebengine - alsaLib + alsa-lib dbus freetype fontconfig diff --git a/third_party/nixpkgs/pkgs/applications/office/onlyoffice-bin/default.nix b/third_party/nixpkgs/pkgs/applications/office/onlyoffice-bin/default.nix index daa71bff06..75e6924db9 100644 --- a/third_party/nixpkgs/pkgs/applications/office/onlyoffice-bin/default.nix +++ b/third_party/nixpkgs/pkgs/applications/office/onlyoffice-bin/default.nix @@ -2,7 +2,7 @@ , lib , fetchurl # Alphabetic ordering below -, alsaLib +, alsa-lib , at-spi2-atk , atk , autoPatchelfHook @@ -87,7 +87,7 @@ in stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib at-spi2-atk atk cairo diff --git a/third_party/nixpkgs/pkgs/applications/office/portfolio/default.nix b/third_party/nixpkgs/pkgs/applications/office/portfolio/default.nix index 17c6398f4f..eb2c0b0f1e 100644 --- a/third_party/nixpkgs/pkgs/applications/office/portfolio/default.nix +++ b/third_party/nixpkgs/pkgs/applications/office/portfolio/default.nix @@ -24,11 +24,11 @@ let in stdenv.mkDerivation rec { pname = "PortfolioPerformance"; - version = "0.52.0"; + version = "0.53.1"; src = fetchurl { url = "https://github.com/buchen/portfolio/releases/download/${version}/PortfolioPerformance-${version}-linux.gtk.x86_64.tar.gz"; - sha256 = "1pvjckh7z803piqyzrvk54jd43f2vcyx20zjcgmq1va8jc3q69k1"; + sha256 = "0hddq1nijxhr6kgf7gydw0nh07lh86fs8srkhm29ik4hmv8ch19p"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/office/timedoctor/default.nix b/third_party/nixpkgs/pkgs/applications/office/timedoctor/default.nix new file mode 100644 index 0000000000..f4ce436e96 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/office/timedoctor/default.nix @@ -0,0 +1,123 @@ +{ appimageTools +, fetchurl +, lib +}: + +# You can debug this package with: $ ELECTRON_ENABLE_LOGGING=true timedoctor +let + version = "3.12.12"; + sha256 = "01j149c6lacgysll3sajxlb43m1al08kdcwc6zyzw80nrp4iagf6"; +in +appimageTools.wrapType2 { + name = "timedoctor-${version}"; + src = fetchurl { + inherit sha256; + url = "https://repo2.timedoctor.com/td-desktop-hybrid/prod/v${version}/timedoctor-desktop_${version}_linux-x86_64.AppImage"; + }; + multiPkgs = _: with _; [ + alsaLib + atk + at-spi2-atk + at-spi2-core + cairo + coreutils + cups + dbus + dbus.lib + desktop-file-utils + expat + expat.dev + file + freetype + gcc + gcc-unwrapped.lib + gdb + gdk-pixbuf + git + glib + glibc + gnome.gdk_pixbuf + gnome.gtk + gnome.gtk.dev + gnome.zenity + gnome2.GConf + gnumake + gnutar + gpsd + gtk3 + gtk3.dev + gtk3-x11 + gtk3-x11.dev + kdialog + libappindicator-gtk2.out + libexif + (libjpeg.override { enableJpeg8 = true; }).out + libnotify + libpng + libxml2 + libxslt + netcat + nettools + nodePackages.asar + nspr + nss + openjdk + pango + patchelf + python38 + strace + sqlite + sqlite.dev + udev + unzip + utillinux + watch + wget + which + wrapGAppsHook + xdg_utils + xorg.libX11 + xorg.libXau + xorg.libXaw + xorg.libXaw3d + xorg.libxcb + xorg.libXcomposite + xorg.libXcursor + xorg.libXdamage + xorg.libXdmcp + xorg.libXext + xorg.libXfixes + xorg.libXfont + xorg.libXfont2 + xorg.libXft + xorg.libXi + xorg.libXinerama + xorg.libXmu + xorg.libXp + xorg.libXpm + xorg.libXpresent + xorg.libXrandr + xorg.libXrender + xorg.libXres + xorg.libXScrnSaver + xorg.libXt + xorg.libXTrap + xorg.libXtst + xorg.libXv + xorg.libXvMC + xorg.libXxf86dga + xorg.libXxf86misc + xorg.libXxf86vm + xorg.xcbutilkeysyms + zip + zlib + zsh + ]; + meta = with lib; { + description = "Employee time tracking software"; + homepage = "https://www.timedoctor.com"; + license = licenses.unfree; + maintainers = with maintainers; [ kamadorueda ]; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/office/wpsoffice/default.nix b/third_party/nixpkgs/pkgs/applications/office/wpsoffice/default.nix index b18f22b6c1..ada2804ccb 100644 --- a/third_party/nixpkgs/pkgs/applications/office/wpsoffice/default.nix +++ b/third_party/nixpkgs/pkgs/applications/office/wpsoffice/default.nix @@ -5,7 +5,7 @@ , dpkg , wrapGAppsHook , wrapQtAppsHook -, alsaLib +, alsa-lib , atk , bzip2 , cairo @@ -65,7 +65,7 @@ stdenv.mkDerivation rec { }; buildInputs = with xorg; [ - alsaLib + alsa-lib atk bzip2 cairo diff --git a/third_party/nixpkgs/pkgs/applications/printing/pappl/default.nix b/third_party/nixpkgs/pkgs/applications/printing/pappl/default.nix index de0b9bada5..9752ebc0e7 100644 --- a/third_party/nixpkgs/pkgs/applications/printing/pappl/default.nix +++ b/third_party/nixpkgs/pkgs/applications/printing/pappl/default.nix @@ -12,13 +12,13 @@ stdenv.mkDerivation rec { pname = "pappl"; - version = "1.0.2"; + version = "1.0.3"; src = fetchFromGitHub { owner = "michaelrsweet"; repo = pname; rev = "v${version}"; - sha256 = "sha256-L4ptgAJAvyTUCVl6YotA8DnlISc9PwZM0WjXyOvxGJg="; + sha256 = "sha256-B3g6R0/li+5D4odFG21qj+SR3K4PFnzzxIGCwbk1buo="; }; outputs = [ "out" "dev" ]; diff --git a/third_party/nixpkgs/pkgs/applications/radio/direwolf/default.nix b/third_party/nixpkgs/pkgs/applications/radio/direwolf/default.nix index 4f8ca55049..7b8f60819c 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/direwolf/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/direwolf/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, cmake, alsaLib, espeak, glibc, gpsd +{ lib, stdenv, fetchFromGitHub, cmake, alsa-lib, espeak, glibc, gpsd , hamlib, perl, python3, udev }: with lib; @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { buildInputs = [ espeak gpsd hamlib perl python3 - ] ++ (optionals stdenv.isLinux [alsaLib udev]); + ] ++ (optionals stdenv.isLinux [alsa-lib udev]); patches = [ ./udev-fix.patch diff --git a/third_party/nixpkgs/pkgs/applications/radio/fldigi/default.nix b/third_party/nixpkgs/pkgs/applications/radio/fldigi/default.nix index d14e0017f6..36f020ed27 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/fldigi/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/fldigi/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, hamlib, fltk14, libjpeg, libpng, portaudio, libsndfile, - libsamplerate, libpulseaudio, libXinerama, gettext, pkg-config, alsaLib }: + libsamplerate, libpulseaudio, libXinerama, gettext, pkg-config, alsa-lib }: stdenv.mkDerivation rec { version = "4.1.18"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { }; buildInputs = [ libXinerama gettext hamlib fltk14 libjpeg libpng portaudio - libsndfile libsamplerate libpulseaudio pkg-config alsaLib ]; + libsndfile libsamplerate libpulseaudio pkg-config alsa-lib ]; meta = { description = "Digital modem program"; diff --git a/third_party/nixpkgs/pkgs/applications/radio/gnuradio/3.7.nix b/third_party/nixpkgs/pkgs/applications/radio/gnuradio/3.7.nix index 50993dd6f8..3e423e025b 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/gnuradio/3.7.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/gnuradio/3.7.nix @@ -17,7 +17,7 @@ , codec2 , gsm , fftwFloat -, alsaLib +, alsa-lib , libjack2 , CoreAudio , uhd @@ -143,7 +143,7 @@ let }; gr-audio = { runtime = [] - ++ lib.optionals stdenv.isLinux [ alsaLib libjack2 ] + ++ lib.optionals stdenv.isLinux [ alsa-lib libjack2 ] ++ lib.optionals stdenv.isDarwin [ CoreAudio ] ; cmakeEnableFlag = "GR_AUDIO"; diff --git a/third_party/nixpkgs/pkgs/applications/radio/gnuradio/3.8.nix b/third_party/nixpkgs/pkgs/applications/radio/gnuradio/3.8.nix index 9f90d3c035..f20ffe01bd 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/gnuradio/3.8.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/gnuradio/3.8.nix @@ -16,7 +16,7 @@ , codec2 , gsm , fftwFloat -, alsaLib +, alsa-lib , libjack2 , CoreAudio , uhd @@ -149,7 +149,7 @@ let }; gr-audio = { runtime = [] - ++ lib.optionals stdenv.isLinux [ alsaLib libjack2 ] + ++ lib.optionals stdenv.isLinux [ alsa-lib libjack2 ] ++ lib.optionals stdenv.isDarwin [ CoreAudio ] ; cmakeEnableFlag = "GR_AUDIO"; diff --git a/third_party/nixpkgs/pkgs/applications/radio/gnuradio/default.nix b/third_party/nixpkgs/pkgs/applications/radio/gnuradio/default.nix index d622fef424..528ea12645 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/gnuradio/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/gnuradio/default.nix @@ -16,7 +16,7 @@ , codec2 , gsm , fftwFloat -, alsaLib +, alsa-lib , libjack2 , CoreAudio , uhd @@ -151,7 +151,7 @@ let }; gr-audio = { runtime = [] - ++ lib.optionals stdenv.isLinux [ alsaLib libjack2 ] + ++ lib.optionals stdenv.isLinux [ alsa-lib libjack2 ] ++ lib.optionals stdenv.isDarwin [ CoreAudio ] ; cmakeEnableFlag = "GR_AUDIO"; diff --git a/third_party/nixpkgs/pkgs/applications/radio/gqrx/default.nix b/third_party/nixpkgs/pkgs/applications/radio/gqrx/default.nix index cccdff1f3c..272c381db8 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/gqrx/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/gqrx/default.nix @@ -7,7 +7,7 @@ , log4cpp , mpir , fftwFloat -, alsaLib +, alsa-lib , libjack2 # drivers (optional): , rtl-sdr @@ -37,7 +37,7 @@ gnuradio3_8Minimal.pkgs.mkDerivation rec { log4cpp mpir fftwFloat - alsaLib + alsa-lib libjack2 gnuradio3_8Minimal.unwrapped.boost qt5.qtbase diff --git a/third_party/nixpkgs/pkgs/applications/radio/minimodem/default.nix b/third_party/nixpkgs/pkgs/applications/radio/minimodem/default.nix index 48068a342e..c023e76b27 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/minimodem/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/minimodem/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, pkg-config, autoconf, automake, libtool -, fftw, fftwSinglePrec, alsaLib, libsndfile, libpulseaudio +, fftw, fftwSinglePrec, alsa-lib, libsndfile, libpulseaudio }: stdenv.mkDerivation rec { @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config autoconf automake libtool ]; - buildInputs = [ fftw fftwSinglePrec alsaLib libsndfile libpulseaudio ]; + buildInputs = [ fftw fftwSinglePrec alsa-lib libsndfile libpulseaudio ]; preConfigure = '' aclocal \ diff --git a/third_party/nixpkgs/pkgs/applications/radio/pothos/default.nix b/third_party/nixpkgs/pkgs/applications/radio/pothos/default.nix index 64f5093c4b..77a7d8cf69 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/pothos/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/pothos/default.nix @@ -13,7 +13,7 @@ , nlohmann_json , soapysdr-with-plugins , portaudio -, alsaLib +, alsa-lib , muparserx , python3 }: @@ -39,7 +39,7 @@ mkDerivation rec { buildInputs = [ pcre poco qtbase qtsvg libsForQt5.qwt nlohmann_json - soapysdr-with-plugins portaudio alsaLib muparserx python3 + soapysdr-with-plugins portaudio alsa-lib muparserx python3 ]; postInstall = '' diff --git a/third_party/nixpkgs/pkgs/applications/radio/qsstv/default.nix b/third_party/nixpkgs/pkgs/applications/radio/qsstv/default.nix index e6fa95b5dc..555264ac48 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/qsstv/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/qsstv/default.nix @@ -1,5 +1,5 @@ { mkDerivation, lib, fetchurl, qtbase, qmake, openjpeg, pkg-config, fftw, - libpulseaudio, alsaLib, hamlib, libv4l, fftwFloat }: + libpulseaudio, alsa-lib, hamlib, libv4l, fftwFloat }: mkDerivation rec { version = "9.4.4"; @@ -17,7 +17,7 @@ mkDerivation rec { pkg-config ]; - buildInputs = [ qtbase openjpeg fftw libpulseaudio alsaLib hamlib libv4l + buildInputs = [ qtbase openjpeg fftw libpulseaudio alsa-lib hamlib libv4l fftwFloat ]; postInstall = '' diff --git a/third_party/nixpkgs/pkgs/applications/radio/quisk/default.nix b/third_party/nixpkgs/pkgs/applications/radio/quisk/default.nix index 19a4e71501..75fb91d5ce 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/quisk/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/quisk/default.nix @@ -1,5 +1,5 @@ { lib, python38Packages, fetchPypi -, fftw, alsaLib, pulseaudio, wxPython_4_0 }: +, fftw, alsa-lib, pulseaudio, wxPython_4_0 }: python38Packages.buildPythonApplication rec { pname = "quisk"; @@ -10,7 +10,7 @@ python38Packages.buildPythonApplication rec { sha256 = "37dfb02a32341025c086b07d66ddf1608d4ee1ae1c62fb51f87c97662f13e0d8"; }; - buildInputs = [ fftw alsaLib pulseaudio ]; + buildInputs = [ fftw alsa-lib pulseaudio ]; propagatedBuildInputs = [ wxPython_4_0 ]; diff --git a/third_party/nixpkgs/pkgs/applications/radio/soapyaudio/default.nix b/third_party/nixpkgs/pkgs/applications/radio/soapyaudio/default.nix index e12cced055..74924de241 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/soapyaudio/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/soapyaudio/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, cmake, pkg-config -, hamlib, rtaudio, alsaLib, libpulseaudio, libjack2, libusb1, soapysdr +, hamlib, rtaudio, alsa-lib, libpulseaudio, libjack2, libusb1, soapysdr } : stdenv.mkDerivation rec { @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ cmake pkg-config ]; - buildInputs = [ hamlib rtaudio alsaLib libpulseaudio libjack2 libusb1 soapysdr ]; + buildInputs = [ hamlib rtaudio alsa-lib libpulseaudio libjack2 libusb1 soapysdr ]; cmakeFlags = [ "-DSoapySDR_DIR=${soapysdr}/share/cmake/SoapySDR/" diff --git a/third_party/nixpkgs/pkgs/applications/radio/soundmodem/default.nix b/third_party/nixpkgs/pkgs/applications/radio/soundmodem/default.nix index 7f1332a45a..bedcc8b02c 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/soundmodem/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/soundmodem/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, pkg-config, alsaLib, audiofile, gtk2, libxml2 }: +{ lib, stdenv, fetchurl, pkg-config, alsa-lib, audiofile, gtk2, libxml2 }: stdenv.mkDerivation rec { name = "soundmodem"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib audiofile gtk2 libxml2 ]; + buildInputs = [ alsa-lib audiofile gtk2 libxml2 ]; patches = [ ./matFix.patch ]; diff --git a/third_party/nixpkgs/pkgs/applications/radio/svxlink/default.nix b/third_party/nixpkgs/pkgs/applications/radio/svxlink/default.nix index d6a82049a2..255f7761be 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/svxlink/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/svxlink/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, cmake, pkg-config, fetchFromGitHub, makeDesktopItem, alsaLib, speex +{ lib, stdenv, cmake, pkg-config, fetchFromGitHub, makeDesktopItem, alsa-lib, speex , libopus, curl, gsm, libgcrypt, libsigcxx, popt, qtbase, qttools , wrapQtAppsHook, rtl-sdr, tcl, doxygen, groff }: @@ -34,7 +34,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config doxygen groff wrapQtAppsHook ]; buildInputs = [ - alsaLib + alsa-lib curl gsm libgcrypt diff --git a/third_party/nixpkgs/pkgs/applications/radio/unixcw/default.nix b/third_party/nixpkgs/pkgs/applications/radio/unixcw/default.nix index cdb84670c6..8d28215ae2 100644 --- a/third_party/nixpkgs/pkgs/applications/radio/unixcw/default.nix +++ b/third_party/nixpkgs/pkgs/applications/radio/unixcw/default.nix @@ -1,4 +1,4 @@ -{lib, stdenv, fetchurl, libpulseaudio, alsaLib , pkg-config, qt5}: +{lib, stdenv, fetchurl, libpulseaudio, alsa-lib , pkg-config, qt5}: stdenv.mkDerivation rec { pname = "unixcw"; version = "3.5.1"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { patches = [ ./remove-use-of-dlopen.patch ]; - buildInputs = [libpulseaudio alsaLib pkg-config qt5.qtbase]; + buildInputs = [libpulseaudio alsa-lib pkg-config qt5.qtbase]; CFLAGS ="-lasound -lpulse-simple"; dontWrapQtApps = true; diff --git a/third_party/nixpkgs/pkgs/applications/science/astronomy/siril/default.nix b/third_party/nixpkgs/pkgs/applications/science/astronomy/siril/default.nix index fd49957aa3..b50cb4b71d 100644 --- a/third_party/nixpkgs/pkgs/applications/science/astronomy/siril/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/astronomy/siril/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitLab, fetchpatch, pkg-config, meson, ninja +{ lib, stdenv, fetchFromGitLab, pkg-config, meson, ninja , git, criterion, gtk3, libconfig, gnuplot, opencv, json-glib , fftwFloat, cfitsio, gsl, exiv2, librtprocess, wcslib, ffmpeg , libraw, libtiff, libpng, libjpeg, libheif, ffms, wrapGAppsHook @@ -6,23 +6,15 @@ stdenv.mkDerivation rec { pname = "siril"; - version = "0.99.8.1"; + version = "0.99.10.1"; src = fetchFromGitLab { owner = "free-astro"; repo = pname; rev = version; - sha256 = "0h3slgpj6zdc0rwmyr9zb0vgf53283hpwb7h26skdswmggsk90i5"; + sha256 = "sha256-gqV+pJNaU+GnYiUo/imofgNdeM+AtDg/pSH7aoqhkYA="; }; - patches = [ - # Backport fix for broken build on glib-2.68 - (fetchpatch { - url = "https://gitlab.com/free-astro/siril/-/commit/d319fceca5b00f156e1c5e3512d3ac1f41beb16a.diff"; - sha256 = "00lq9wq8z48ly3hmkgzfqbdjaxr0hzyl2qwbj45bdnxfwqragh5m"; - }) - ]; - nativeBuildInputs = [ meson ninja pkg-config git criterion wrapGAppsHook ]; @@ -47,7 +39,8 @@ stdenv.mkDerivation rec { homepage = "https://www.siril.org/"; description = "Astrophotographic image processing tool"; license = licenses.gpl3Plus; + changelog = "https://gitlab.com/free-astro/siril/-/blob/HEAD/ChangeLog"; maintainers = with maintainers; [ hjones2199 ]; - platforms = [ "x86_64-linux" ]; + platforms = platforms.linux; }; } diff --git a/third_party/nixpkgs/pkgs/applications/science/astronomy/stellarium/default.nix b/third_party/nixpkgs/pkgs/applications/science/astronomy/stellarium/default.nix index 7922f4d02a..2e28d9d83e 100644 --- a/third_party/nixpkgs/pkgs/applications/science/astronomy/stellarium/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/astronomy/stellarium/default.nix @@ -6,13 +6,13 @@ mkDerivation rec { pname = "stellarium"; - version = "0.21.0"; + version = "0.21.1"; src = fetchFromGitHub { owner = "Stellarium"; repo = "stellarium"; rev = "v${version}"; - sha256 = "sha256-LOBWfKLtoFemiWBUVayIBG0DORvjI6h9kgaPH9hGmKY="; + sha256 = "sha256-dAdB57phD5phl8dQZIHtqtnA2LZqR+JoXTzIBtqBevA="; }; nativeBuildInputs = [ cmake perl wrapQtAppsHook ]; diff --git a/third_party/nixpkgs/pkgs/applications/science/biology/truvari/default.nix b/third_party/nixpkgs/pkgs/applications/science/biology/truvari/default.nix index fffeca2c74..31c1fc50ee 100644 --- a/third_party/nixpkgs/pkgs/applications/science/biology/truvari/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/biology/truvari/default.nix @@ -5,15 +5,20 @@ python3Packages.buildPythonApplication rec { pname = "truvari"; - version = "2.0.2"; + version = "2.1.1"; src = fetchFromGitHub { owner = "spiralgenetics"; repo = "truvari"; rev = "v${version}"; - sha256 = "0lp1wnldjv92k4ncga1h0icb0dpjsrx427vggg40x04a7kp9lwx0"; + sha256 = "14nsdbj063qm175xxixs34cihvsiskc9gym8pg7gbwsh13k5a00h"; }; + postPatch = '' + substituteInPlace setup.py \ + --replace 'python-Levenshtein==0.12.1' 'python-Levenshtein>=0.12.1' + ''; + propagatedBuildInputs = with python3Packages; [ pyvcf python-Levenshtein diff --git a/third_party/nixpkgs/pkgs/applications/science/chemistry/element/default.nix b/third_party/nixpkgs/pkgs/applications/science/chemistry/element/default.nix new file mode 100644 index 0000000000..812272e2fb --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/science/chemistry/element/default.nix @@ -0,0 +1,22 @@ +{ lib, buildGoModule, fetchFromGitHub }: + +buildGoModule rec { + pname = "element"; + version = "1.0.0"; + + src = fetchFromGitHub { + owner = "gennaro-tedesco"; + repo = pname; + rev = "v${version}"; + sha256 = "gjdcNvYNnxb6hOE/MQjTezZeYGBWTr4E8/Pt8YQv3lY="; + }; + + vendorSha256 = "A4g2rQTaYrA4/0rqldUv7iuibzNINEvx9StUnaN2/Yg="; + + meta = with lib; { + description = "The periodic table on the command line"; + homepage = "https://github.com/gennaro-tedesco/element"; + license = licenses.asl20; + maintainers = [ maintainers.j0hax ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/science/chemistry/jmol/default.nix b/third_party/nixpkgs/pkgs/applications/science/chemistry/jmol/default.nix index d8f7bd5eb5..c645693e19 100644 --- a/third_party/nixpkgs/pkgs/applications/science/chemistry/jmol/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/chemistry/jmol/default.nix @@ -17,14 +17,14 @@ let }; in stdenv.mkDerivation rec { - version = "14.31.38"; + version = "14.31.41"; pname = "jmol"; src = let baseVersion = "${lib.versions.major version}.${lib.versions.minor version}"; in fetchurl { url = "mirror://sourceforge/jmol/Jmol/Version%20${baseVersion}/Jmol%20${version}/Jmol-${version}-binary.tar.gz"; - sha256 = "sha256-yXJ1KtTH3bi24GFiVXu8zzQkreDkqbCxgm7fVoSJepg="; + sha256 = "sha256-dI1WkQgFikxaIjjqVKZcsGvc3QIu/NMIcRW3N8PGbkY="; }; patchPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/science/electronics/dsview/libsigrok4dsl.nix b/third_party/nixpkgs/pkgs/applications/science/electronics/dsview/libsigrok4dsl.nix index 8e04d72780..c33bfd408b 100644 --- a/third_party/nixpkgs/pkgs/applications/science/electronics/dsview/libsigrok4dsl.nix +++ b/third_party/nixpkgs/pkgs/applications/science/electronics/dsview/libsigrok4dsl.nix @@ -1,6 +1,6 @@ { lib, stdenv, pkg-config, autoreconfHook, glib, libzip, libserialport, check, libusb1, libftdi, -systemd, alsaLib, dsview +systemd, alsa-lib, dsview }: stdenv.mkDerivation { @@ -15,7 +15,7 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkg-config autoreconfHook ]; buildInputs = [ - glib libzip libserialport libusb1 libftdi systemd check alsaLib + glib libzip libserialport libusb1 libftdi systemd check alsa-lib ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/science/electronics/eagle/eagle.nix b/third_party/nixpkgs/pkgs/applications/science/electronics/eagle/eagle.nix index 58873b8a77..0628134d9d 100644 --- a/third_party/nixpkgs/pkgs/applications/science/electronics/eagle/eagle.nix +++ b/third_party/nixpkgs/pkgs/applications/science/electronics/eagle/eagle.nix @@ -1,13 +1,13 @@ { lib, stdenv, mkDerivation, fetchurl, makeDesktopItem , libXrender, libXrandr, libXcursor, libX11, libXext, libXi, libxcb - , libGL, glib, nss, nspr, expat, alsaLib + , libGL, glib, nss, nspr, expat, alsa-lib , qtbase, qtdeclarative, qtsvg, qtlocation, qtwebchannel, qtwebengine }: let libPath = lib.makeLibraryPath [ libXrender libXrandr libXcursor libX11 libXext libXi libxcb - libGL glib nss nspr expat alsaLib + libGL glib nss nspr expat alsa-lib qtbase qtdeclarative qtsvg qtlocation qtwebchannel qtwebengine ]; in @@ -32,7 +32,7 @@ let buildInputs = [ libXrender libXrandr libXcursor libX11 libXext libXi libxcb - libGL glib nss nspr expat alsaLib + libGL glib nss nspr expat alsa-lib qtbase qtdeclarative qtsvg qtlocation qtwebchannel qtwebengine ]; diff --git a/third_party/nixpkgs/pkgs/applications/science/electronics/fritzing/default.nix b/third_party/nixpkgs/pkgs/applications/science/electronics/fritzing/default.nix index 79c01d3ec7..30cbd8f92b 100644 --- a/third_party/nixpkgs/pkgs/applications/science/electronics/fritzing/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/electronics/fritzing/default.nix @@ -1,86 +1,75 @@ -{ mkDerivation, lib, fetchpatch, fetchFromGitHub, qmake, pkg-config -, qtbase, qtsvg, qttools, qtserialport, boost, libgit2 +{ mkDerivation +, lib +, fetchFromGitHub +, qmake +, pkg-config +, qtbase +, qtsvg +, qttools +, qtserialport +, boost +, libgit2 }: let # build number corresponding to a release, has no further relation # see https://github.com/fritzing/fritzing-app/releases/tag/CD-498 - fritzingBuild = "498"; + # fritzingBuild = "498"; + # version 0.9.6 is properly tagged, hope it continues + # SHA256 of the fritzing-parts HEAD on the master branch, # which contains the latest stable parts definitions - partsSha = "e79a69765026f3fda8aab1b3e7a4952c28047a62"; + partsSha = "6f04697be286768bc9e4d64f8707e8e40cbcafcb"; in mkDerivation rec { pname = "fritzing"; - version = "0.9.4-${fritzingBuild}"; + version = "0.9.6"; src = fetchFromGitHub { - owner = "fritzing"; + owner = pname; repo = "fritzing-app"; - rev = "CD-${fritzingBuild}"; - sha256 = "0aljj2wbmm1vd64nhj6lh9qy856pd5avlgydsznya2vylyz20p34"; + rev = version; + sha256 = "083nz7vj7a334575smjry6257535h68gglh8a381xxa36dw96aqs"; }; parts = fetchFromGitHub { - owner = "fritzing"; + owner = pname; repo = "fritzing-parts"; name = "fritzing-parts"; rev = partsSha; - sha256 = "0spka33a5qq34aq79j01arw1aly4vh0hzv7mahryhdlcdk22qqvc"; + sha256 = "1f4w0hz44n4iw1rc5vhcgzvlji54rf4yr8bvzkqv99hn2xf5pjgs"; }; buildInputs = [ qtbase qtsvg qtserialport boost libgit2 ]; - nativeBuildInputs = [ qmake pkg-config qttools ]; - patches = [(fetchpatch { - name = "fix-libgit2-version.patch"; - url = "https://github.com/fritzing/fritzing-app/commit/472951243d70eeb40a53b1f7e16e6eab0588d079.patch"; - sha256 = "0v1zi609cjnqac80xgnk23n54z08g1lia37hbzfl8jcq9sn9adak"; - })]; - postPatch = '' substituteInPlace phoenix.pro \ --replace 'LIBGIT_STATIC = true' 'LIBGIT_STATIC = false' - substituteInPlace tools/linux_release_script/release.sh \ - --replace 'git status' 'echo >/dev/null' \ - --replace 'git clean' 'echo >/dev/null' \ - --replace 'git clone' 'echo >/dev/null' \ - --replace 'release_folder="' 'release_folder="$out" #' \ - --replace './Fritzing -db' '# run after fixup' - substituteInPlace src/fapplication.cpp \ --replace 'PartsChecker::getSha(dir.absolutePath());' '"${partsSha}";' - ''; - buildPhase = '' - bash tools/linux_release_script/release.sh ${version} - ''; - - installPhase = '' - rm "$out/Fritzing" # remove script file - mkdir "$out/bin" - mv "$out/lib/Fritzing" "$out/bin/Fritzing" - mkdir --parents "$out/share/applications" "$out/share/metainfo" - mv --target-directory="$out/share/applications" "$out/org.fritzing.Fritzing.desktop" - mv --target-directory="$out/share/metainfo" "$out/org.fritzing.Fritzing.appdata.xml" - cp --recursive --no-target-directory "$parts" "$out/fritzing-parts" + mkdir parts + cp -a ${parts}/* parts/ ''; postFixup = '' # generate the parts.db file - QT_QPA_PLATFORM=offscreen "$out/bin/Fritzing" -db "$out/fritzing-parts/parts.db" -pp "$out/fritzing-parts" -folder "$out" + QT_QPA_PLATFORM=offscreen "$out/bin/Fritzing" \ + -db "$out/share/fritzing/parts/parts.db" \ + -pp "$out/fritzing/parts" \ + -folder "$out/share/fritzing" ''; qmakeFlags = [ "phoenix.pro" ]; - meta = { + meta = with lib; { description = "An open source prototyping tool for Arduino-based projects"; homepage = "https://fritzing.org/"; - license = lib.licenses.gpl3; - maintainers = [ lib.maintainers.robberer ]; - platforms = lib.platforms.linux; + license = with licenses; [ gpl3 cc-by-sa-30 ]; + maintainers = with maintainers; [ robberer ]; + platforms = platforms.linux; }; } diff --git a/third_party/nixpkgs/pkgs/applications/science/electronics/horizon-eda/default.nix b/third_party/nixpkgs/pkgs/applications/science/electronics/horizon-eda/default.nix index dee0a851bf..c1ff99a2c3 100644 --- a/third_party/nixpkgs/pkgs/applications/science/electronics/horizon-eda/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/electronics/horizon-eda/default.nix @@ -23,13 +23,13 @@ stdenv.mkDerivation rec { pname = "horizon-eda"; - version = "1.4.0"; + version = "2.0.0"; src = fetchFromGitHub { owner = "horizon-eda"; repo = "horizon"; rev = "v${version}"; - sha256 = "0mra6kf1c2qixfzqva6r01qms5kdabbhhblhk5is6h6nq78i8640"; + sha256 = "sha256-FS24B/ySKeF8r7Tro+mf5P0ALtlPwwJCU3YdDNYLe6o="; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/science/electronics/nanovna-saver/default.nix b/third_party/nixpkgs/pkgs/applications/science/electronics/nanovna-saver/default.nix index 9f959bddf2..af78fc71eb 100644 --- a/third_party/nixpkgs/pkgs/applications/science/electronics/nanovna-saver/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/electronics/nanovna-saver/default.nix @@ -1,12 +1,25 @@ -{ lib, mkDerivationWith, wrapQtAppsHook, python3Packages, fetchFromGitHub -, qtbase }: +{ lib +, python3 +, fetchFromGitHub +, wrapQtAppsHook +}: let - version = "0.3.8"; + python = python3.override { + packageOverrides = self: super: { + scipy = super.scipy.overridePythonAttrs (oldAttrs: rec { + version = "1.4.1"; + src = oldAttrs.src.override { + inherit version; + sha256 = "0ndw7zyxd2dj37775mc75zm4fcyiipnqxclc45mkpxy8lvrvpqfy"; + }; + doCheck = false; + }); + }; + }; +in python.pkgs.buildPythonApplication rec { pname = "nanovna-saver"; - -in mkDerivationWith python3Packages.buildPythonApplication { - inherit pname version; + version = "0.3.8"; src = fetchFromGitHub { owner = "NanoVNA-Saver"; @@ -17,9 +30,9 @@ in mkDerivationWith python3Packages.buildPythonApplication { nativeBuildInputs = [ wrapQtAppsHook ]; - propagatedBuildInputs = with python3Packages; [ + propagatedBuildInputs = with python.pkgs; [ cython - scipy_1_4 + scipy pyqt5 pyserial numpy @@ -30,10 +43,11 @@ in mkDerivationWith python3Packages.buildPythonApplication { dontWrapGApps = true; dontWrapQtApps = true; - postFixup = '' - wrapProgram $out/bin/NanoVNASaver \ - "''${gappsWrapperArgs[@]}" \ + preFixup = '' + makeWrapperArgs+=( + "''${gappsWrapperArgs[@]}" "''${qtWrapperArgs[@]}" + ) ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/science/electronics/openhantek6022/default.nix b/third_party/nixpkgs/pkgs/applications/science/electronics/openhantek6022/default.nix index acdac346fd..d2cdf20ab8 100644 --- a/third_party/nixpkgs/pkgs/applications/science/electronics/openhantek6022/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/electronics/openhantek6022/default.nix @@ -2,13 +2,13 @@ mkDerivation rec { pname = "openhantek6022"; - version = "3.1.3"; + version = "3.2.3"; src = fetchFromGitHub { owner = "OpenHantek"; repo = "OpenHantek6022"; rev = version; - sha256 = "1n4l8ks5808d99zj1vj0ck0v1lb9s7iv3ahww7ximbf9iha39pbm"; + sha256 = "0hnd3rdmv76dwwlmkykzwhp5sbxd1fr5ss8zdfdybxw28cxlpq8r"; }; nativeBuildInputs = [ cmake makeWrapper ]; @@ -23,8 +23,8 @@ mkDerivation rec { meta = with lib; { description = "Free software for Hantek and compatible (Voltcraft/Darkwire/Protek/Acetech) USB digital signal oscilloscopes"; - homepage = "https://github.com/OpenHantek/OpenHantek6022"; - license = licenses.gpl3; + homepage = "https://github.com/OpenHantek/OpenHantek6022"; + license = licenses.gpl3; maintainers = with maintainers; [ baracoder ]; platforms = qtbase.meta.platforms; }; diff --git a/third_party/nixpkgs/pkgs/applications/science/logic/eprover/default.nix b/third_party/nixpkgs/pkgs/applications/science/logic/eprover/default.nix index 14c46f88b2..3b757d40a6 100644 --- a/third_party/nixpkgs/pkgs/applications/science/logic/eprover/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/logic/eprover/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "eprover"; - version = "2.5"; + version = "2.6"; src = fetchurl { url = "https://wwwlehre.dhbw-stuttgart.de/~sschulz/WORK/E_DOWNLOAD/V_${version}/E.tgz"; - sha256 = "0jj0zkiqpcx9xp16spkskrv3jycprz7jg1g97i67j43c4yvxylwa"; + sha256 = "sha256-qh896qIpFR5g1gdWAwGkbNJLBqUQCeCpuoYHHkDXPt0="; }; buildInputs = [ which ]; diff --git a/third_party/nixpkgs/pkgs/applications/science/logic/gappa/default.nix b/third_party/nixpkgs/pkgs/applications/science/logic/gappa/default.nix index 73f34f60fc..c7c5c9c6fa 100644 --- a/third_party/nixpkgs/pkgs/applications/science/logic/gappa/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/logic/gappa/default.nix @@ -1,11 +1,11 @@ { lib, stdenv, fetchurl, gmp, mpfr, boost }: stdenv.mkDerivation { - name = "gappa-1.3.5"; + name = "gappa-1.4.0"; src = fetchurl { - url = "https://gforge.inria.fr/frs/download.php/file/38044/gappa-1.3.5.tar.gz"; - sha256 = "0q1wdiwqj6fsbifaayb1zkp20bz8a1my81sqjsail577jmzwi07w"; + url = "https://gforge.inria.fr/frs/download.php/file/38044/gappa-1.4.0.tar.gz"; + sha256 = "sha256-/IDIf5XnFBqVllgH5GtQ6C8g7vxheaVcXNoZiXlsPGA="; }; buildInputs = [ gmp mpfr boost.dev ]; diff --git a/third_party/nixpkgs/pkgs/applications/science/logic/why3/default.nix b/third_party/nixpkgs/pkgs/applications/science/logic/why3/default.nix index c56e5445f0..924ff3fd9f 100644 --- a/third_party/nixpkgs/pkgs/applications/science/logic/why3/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/logic/why3/default.nix @@ -3,36 +3,33 @@ stdenv.mkDerivation { pname = "why3"; - version = "1.3.3"; + version = "1.4.0"; src = fetchurl { - url = "https://gforge.inria.fr/frs/download.php/file/38367/why3-1.3.3.tar.gz"; - sha256 = "1n0a2nn1gnk0zg339lh698g4wpk7m8m1vyi2yvifd5adqvk4milw"; + url = "https://gforge.inria.fr/frs/download.php/file/38425/why3-1.4.0.tar.gz"; + sha256 = "0lw0cpx347zz9vvwqibmbxgs80fsd16scgk3isscvwxnajpc3rv8"; }; buildInputs = with ocamlPackages; [ ocaml findlib ocamlgraph zarith menhir menhirLib - # Compressed Sessions # Emacs compilation of why3.el emacs # Documentation rubber hevea # GUI - lablgtk + lablgtk3-sourceview3 # WebIDE js_of_ocaml js_of_ocaml-ppx + # S-expression output for why3pp + ppx_deriving ppx_sexp_conv # Coq Support coqPackages.coq coqPackages.flocq ocamlPackages.camlp5 ]; - propagatedBuildInputs = with ocamlPackages; [ camlzip num ]; + propagatedBuildInputs = with ocamlPackages; [ camlzip num re sexplib ]; enableParallelBuilding = true; - postPatch = '' - substituteInPlace Makefile.in --replace js_of_ocaml.ppx js_of_ocaml-ppx - ''; - configureFlags = [ "--enable-verbose-make" ]; installTargets = [ "install" "install-lib" ]; diff --git a/third_party/nixpkgs/pkgs/applications/science/machine-learning/starspace/default.nix b/third_party/nixpkgs/pkgs/applications/science/machine-learning/starspace/default.nix index d5a6cb796a..ca7500cd5c 100644 --- a/third_party/nixpkgs/pkgs/applications/science/machine-learning/starspace/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/machine-learning/starspace/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, boost165 }: +{ lib, stdenv, fetchFromGitHub, boost165, zlib }: stdenv.mkDerivation rec { pname = "starspace"; @@ -11,13 +11,17 @@ stdenv.mkDerivation rec { sha256 = "0sc7a37z1skb9377a1qs8ggwrkz0nmpybx7sms38xj05b702kbvj"; }; - buildInputs = [ boost165 ]; + buildInputs = [ boost165 zlib ]; makeFlags = [ "CXX=${stdenv.cc.targetPrefix}c++" "BOOST_DIR=${boost165.dev}/include" ]; + preBuild = '' + cp makefile_compress makefile + ''; + installPhase = '' mkdir -p $out/bin mv starspace $out/bin diff --git a/third_party/nixpkgs/pkgs/applications/science/machine-learning/vowpal-wabbit/default.nix b/third_party/nixpkgs/pkgs/applications/science/machine-learning/vowpal-wabbit/default.nix index de6f921298..d1523b571f 100644 --- a/third_party/nixpkgs/pkgs/applications/science/machine-learning/vowpal-wabbit/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/machine-learning/vowpal-wabbit/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, cmake, boost169, flatbuffers, fmt, rapidjson, spdlog, zlib }: +{ lib, stdenv, fetchFromGitHub, cmake, boost, flatbuffers, fmt, rapidjson, spdlog, zlib }: stdenv.mkDerivation rec { pname = "vowpal-wabbit"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; buildInputs = [ - boost169 + boost flatbuffers fmt rapidjson diff --git a/third_party/nixpkgs/pkgs/applications/science/math/4ti2/default.nix b/third_party/nixpkgs/pkgs/applications/science/math/4ti2/default.nix new file mode 100644 index 0000000000..bb6a89385c --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/science/math/4ti2/default.nix @@ -0,0 +1,38 @@ +{ lib +, stdenv +, fetchFromGitHub +, autoreconfHook +, glpk +, gmp +}: + +stdenv.mkDerivation rec{ + pname = "4ti2"; + version = "1.6.9"; + + src = fetchFromGitHub { + owner = pname; + repo = pname; + rev = "Release_${builtins.replaceStrings ["."] ["_"] version}"; + hash = "sha256-cywneIM0sHt1iQsNfjyQDoDfdRjxpz4l3rfysi9YN20="; + }; + + nativeBuildInputs = [ + autoreconfHook + ]; + + buildInputs = [ + glpk + gmp + ]; + + installFlags = [ "install-exec" ]; + + meta = with lib;{ + homepage = "https://4ti2.github.io/"; + description = "A software package for algebraic, geometric and combinatorial problems on linear spaces"; + license = with licenses; [ gpl2Plus ]; + maintainers = with maintainers; [ AndersonTorres ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/science/math/eukleides/default.nix b/third_party/nixpkgs/pkgs/applications/science/math/eukleides/default.nix index b5a9fc3fa8..6b6bfd7d6e 100644 --- a/third_party/nixpkgs/pkgs/applications/science/math/eukleides/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/math/eukleides/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, bison, flex, makeWrapper, texinfo, readline, texLive }: +{ lib, stdenv, fetchurl, bison, flex, makeWrapper, texinfo4, getopt, readline, texlive }: lib.fix (eukleides: stdenv.mkDerivation rec { pname = "eukleides"; @@ -9,12 +9,16 @@ lib.fix (eukleides: stdenv.mkDerivation rec { sha256 = "0s8cyh75hdj89v6kpm3z24i48yzpkr8qf0cwxbs9ijxj1i38ki0q"; }; - # use $CC instead of hardcoded gcc - patches = [ ./use-CC.patch ]; + patches = [ + # use $CC instead of hardcoded gcc + ./use-CC.patch + # allow PostScript transparency in epstopdf call + ./gs-allowpstransparency.patch + ]; - nativeBuildInputs = [ bison flex texinfo makeWrapper ]; + nativeBuildInputs = [ bison flex texinfo4 makeWrapper ]; - buildInputs = [ readline texLive ]; + buildInputs = [ getopt readline ]; preConfigure = '' substituteInPlace Makefile \ @@ -34,19 +38,15 @@ lib.fix (eukleides: stdenv.mkDerivation rec { postInstall = '' wrapProgram $out/bin/euktoeps \ - --set-default TEXINPUTS : \ - --prefix TEXINPUTS : "$tex/tex/latex/eukleides" \ - --prefix PATH : "${texLive}/bin" - wrapProgram $out/bin/euktopdf \ - --set-default TEXINPUTS : \ - --prefix TEXINPUTS : "$tex/tex/latex/eukleides" \ - --prefix PATH : "${texLive}/bin" + --prefix PATH : ${lib.makeBinPath [ getopt ]} ''; outputs = [ "out" "doc" "tex" ]; passthru.tlType = "run"; - passthru.pkgs = [ eukleides.tex ]; + passthru.pkgs = [ eukleides.tex ] + # packages needed by euktoeps, euktopdf and eukleides.sty + ++ (with texlive; collection-pstricks.pkgs ++ epstopdf.pkgs ++ iftex.pkgs ++ moreverb.pkgs); meta = { description = "Geometry Drawing Language"; diff --git a/third_party/nixpkgs/pkgs/applications/science/math/eukleides/gs-allowpstransparency.patch b/third_party/nixpkgs/pkgs/applications/science/math/eukleides/gs-allowpstransparency.patch new file mode 100644 index 0000000000..aa92e6cc9f --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/science/math/eukleides/gs-allowpstransparency.patch @@ -0,0 +1,10 @@ +--- a/bash/euktopdf ++++ b/bash/euktopdf +@@ -55,6 +55,6 @@ do + exit 1 + fi + dvips -q -E -o $base.eps $base.dvi && +- epstopdf $base.eps && ++ epstopdf --gsopt=-dALLOWPSTRANSPARENCY $base.eps && + rm -f $base.{tex,log,dvi,eps} + done diff --git a/third_party/nixpkgs/pkgs/applications/science/math/gurobi/default.nix b/third_party/nixpkgs/pkgs/applications/science/math/gurobi/default.nix index 2bfeaa0056..91ee7c1c65 100644 --- a/third_party/nixpkgs/pkgs/applications/science/math/gurobi/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/math/gurobi/default.nix @@ -1,35 +1,28 @@ -{ stdenv, lib, fetchurl, autoPatchelfHook, python2 }: +{ stdenv, lib, fetchurl, autoPatchelfHook, python3 }: -let - majorVersion = "8.1"; -in stdenv.mkDerivation rec { +stdenv.mkDerivation rec { pname = "gurobi"; - version = "${majorVersion}.0"; + version = "9.1.2"; - src = with lib; fetchurl { - url = "http://packages.gurobi.com/${versions.majorMinor version}/gurobi${version}_linux64.tar.gz"; - sha256 = "1yjqbzqnq4jjkjm616d36bgd3rmqr0a1ii17n0prpdjzmdlq63dz"; + src = fetchurl { + url = "https://packages.gurobi.com/${lib.versions.majorMinor version}/gurobi${version}_linux64.tar.gz"; + sha256 = "7f60bd675f79476bb2b32cd632aa1d470f8246f2b033b7652d8de86f6e7e429b"; }; sourceRoot = "gurobi${builtins.replaceStrings ["."] [""] version}/linux64"; nativeBuildInputs = [ autoPatchelfHook ]; - buildInputs = [ (python2.withPackages (ps: [ ps.gurobipy ])) ]; + buildInputs = [ (python3.withPackages (ps: [ ps.gurobipy ])) ]; strictDeps = true; - buildPhase = '' - cd src/build - make - cd ../.. - ''; + makeFlags = [ "--directory=src/build" ]; installPhase = '' mkdir -p $out/bin cp bin/* $out/bin/ - rm $out/bin/gurobi.env rm $out/bin/gurobi.sh - rm $out/bin/python2.7 + rm $out/bin/python* cp lib/gurobi.py $out/bin/gurobi.sh @@ -48,7 +41,7 @@ in stdenv.mkDerivation rec { ln -s $out/lib/gurobi-javadoc.jar $out/share/java/ ''; - passthru.libSuffix = lib.replaceStrings ["."] [""] majorVersion; + passthru.libSuffix = lib.replaceStrings [ "." ] [ "" ] (lib.versions.majorMinor version); meta = with lib; { description = "Optimization solver for mathematical programming"; diff --git a/third_party/nixpkgs/pkgs/applications/science/math/mathematica/10.nix b/third_party/nixpkgs/pkgs/applications/science/math/mathematica/10.nix index 9a8f05bc57..6fed10da18 100644 --- a/third_party/nixpkgs/pkgs/applications/science/math/mathematica/10.nix +++ b/third_party/nixpkgs/pkgs/applications/science/math/mathematica/10.nix @@ -2,7 +2,7 @@ , coreutils , patchelf , requireFile -, alsaLib +, alsa-lib , fontconfig , freetype , gcc @@ -41,7 +41,7 @@ stdenv.mkDerivation rec { buildInputs = [ coreutils patchelf - alsaLib + alsa-lib coreutils fontconfig freetype diff --git a/third_party/nixpkgs/pkgs/applications/science/math/mathematica/11.nix b/third_party/nixpkgs/pkgs/applications/science/math/mathematica/11.nix index b8270cca90..f6f0046d27 100644 --- a/third_party/nixpkgs/pkgs/applications/science/math/mathematica/11.nix +++ b/third_party/nixpkgs/pkgs/applications/science/math/mathematica/11.nix @@ -3,7 +3,7 @@ , patchelf , requireFile , callPackage -, alsaLib +, alsa-lib , dbus , fontconfig , freetype @@ -37,7 +37,7 @@ stdenv.mkDerivation rec { buildInputs = [ coreutils patchelf - alsaLib + alsa-lib coreutils dbus fontconfig diff --git a/third_party/nixpkgs/pkgs/applications/science/math/mathematica/9.nix b/third_party/nixpkgs/pkgs/applications/science/math/mathematica/9.nix index 43d7853e3d..88db3c4b2e 100644 --- a/third_party/nixpkgs/pkgs/applications/science/math/mathematica/9.nix +++ b/third_party/nixpkgs/pkgs/applications/science/math/mathematica/9.nix @@ -2,7 +2,7 @@ , coreutils , patchelf , requireFile -, alsaLib +, alsa-lib , fontconfig , freetype , gcc @@ -38,7 +38,7 @@ stdenv.mkDerivation rec { buildInputs = [ coreutils patchelf - alsaLib + alsa-lib coreutils fontconfig freetype diff --git a/third_party/nixpkgs/pkgs/applications/science/math/mathematica/default.nix b/third_party/nixpkgs/pkgs/applications/science/math/mathematica/default.nix index 497592f1c0..10301f062e 100644 --- a/third_party/nixpkgs/pkgs/applications/science/math/mathematica/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/math/mathematica/default.nix @@ -4,7 +4,7 @@ , requireFile , callPackage , makeWrapper -, alsaLib +, alsa-lib , dbus , fontconfig , freetype @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { coreutils patchelf makeWrapper - alsaLib + alsa-lib coreutils dbus fontconfig diff --git a/third_party/nixpkgs/pkgs/applications/science/math/mathematica/l10ns.nix b/third_party/nixpkgs/pkgs/applications/science/math/mathematica/l10ns.nix index 896983ce15..d9f6a0c74e 100644 --- a/third_party/nixpkgs/pkgs/applications/science/math/mathematica/l10ns.nix +++ b/third_party/nixpkgs/pkgs/applications/science/math/mathematica/l10ns.nix @@ -8,10 +8,10 @@ let allVersions = with lib; flip map # N.B. Versions in this list should be ordered from newest to oldest. [ { - version = "12.2.0"; + version = "12.3.0"; lang = "en"; language = "English"; - sha256 = "3b6676a203c6adb7e9c418a5484b037974287b5be09c64e7dfea74ddc0e400d7"; + sha256 = "045df045f6e796ded59f64eb2e0f1949ac88dcba1d5b6e05fb53ea0a4aed7215"; } { version = "11.3.0"; diff --git a/third_party/nixpkgs/pkgs/applications/science/math/programmer-calculator/default.nix b/third_party/nixpkgs/pkgs/applications/science/math/programmer-calculator/default.nix new file mode 100644 index 0000000000..0238e53335 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/science/math/programmer-calculator/default.nix @@ -0,0 +1,34 @@ +{ lib, gccStdenv, fetchFromGitHub, ncurses }: + +gccStdenv.mkDerivation rec { + pname = "programmer-calculator"; + version = "2.1"; + + src = fetchFromGitHub { + owner = "alt-romes"; + repo = pname; + rev = "v${version}"; + sha256 = "1vvpbj24ijl9ma0h669n9x0z1im3vqdf8zf2li0xf5h97b14gmv0"; + }; + + buildInputs = [ ncurses ]; + + installPhase = '' + runHook preInstall + install -Dm 555 pcalc -t "$out/bin" + runHook postInstall + ''; + + meta = with lib; { + description = "A terminal calculator for programmers"; + longDescription = '' + Terminal calculator made for programmers working with multiple number + representations, sizes, and overall close to the bits + ''; + homepage = "https://alt-romes.github.io/programmer-calculator"; + changelog = "https://github.com/alt-romes/programmer-calculator/releases/tag/v${version}"; + license = licenses.gpl3Only; + maintainers = with lib.maintainers; [ cjab ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/science/misc/root/default.nix b/third_party/nixpkgs/pkgs/applications/science/misc/root/default.nix index 20b239dc67..b3d0e96a56 100644 --- a/third_party/nixpkgs/pkgs/applications/science/misc/root/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/misc/root/default.nix @@ -1,20 +1,20 @@ -{ stdenv, lib, fetchurl, makeWrapper, cmake, ftgl, gl2ps, glew, gsl, llvm_5 -, libX11, libXpm, libXft, libXext, libGLU, libGL, libxml2, lz4, xz, pcre +{ stdenv, lib, fetchurl, makeWrapper, cmake, git, ftgl, gl2ps, glew, gsl +, libX11, libXpm, libXft, libXext, libGLU, libGL, libxml2, lz4, xz, pcre, nlohmann_json , pkg-config, python, xxHash, zlib, zstd , libAfterImage, giflib, libjpeg, libtiff, libpng , Cocoa, OpenGL, noSplash ? false }: stdenv.mkDerivation rec { pname = "root"; - version = "6.22.08"; + version = "6.24.00"; src = fetchurl { url = "https://root.cern.ch/download/root_v${version}.source.tar.gz"; - sha256 = "0vrgi83hrw4n9zgx873fn4ba3vk54slrwk1cl4cc4plgxzv1y1kg"; + sha256 = "12crjzd7pzx5qpk2pb3z0rhmxlw5gsqaqzfl48qiq8c9l940b8wx"; }; - nativeBuildInputs = [ makeWrapper cmake pkg-config llvm_5.dev ]; - buildInputs = [ ftgl gl2ps glew pcre zlib zstd llvm_5 libxml2 lz4 xz gsl xxHash libAfterImage giflib libjpeg libtiff libpng python.pkgs.numpy ] + nativeBuildInputs = [ makeWrapper cmake pkg-config git ]; + buildInputs = [ ftgl gl2ps glew pcre zlib zstd libxml2 lz4 xz gsl xxHash libAfterImage giflib libjpeg libtiff libpng nlohmann_json python.pkgs.numpy ] ++ lib.optionals (!stdenv.isDarwin) [ libX11 libXpm libXft libXext libGLU libGL ] ++ lib.optionals (stdenv.isDarwin) [ Cocoa OpenGL ] ; @@ -28,6 +28,13 @@ stdenv.mkDerivation rec { substituteInPlace cmake/modules/SearchInstalledSoftware.cmake \ --replace 'set(lcgpackages ' '#set(lcgpackages ' + # Don't require textutil on macOS + : > cmake/modules/RootCPack.cmake + + # Hardcode path to fix use with cmake + sed -i cmake/scripts/ROOTConfig.cmake.in \ + -e 'iset(nlohmann_json_DIR "${nlohmann_json}/lib/cmake/nlohmann_json/")' + patchShebangs build/unix/ '' + lib.optionalString noSplash '' substituteInPlace rootx/src/rootx.cxx --replace "gNoLogo = false" "gNoLogo = true" @@ -35,11 +42,13 @@ stdenv.mkDerivation rec { cmakeFlags = [ "-Drpath=ON" + "-DCMAKE_CXX_STANDARD=17" "-DCMAKE_INSTALL_LIBDIR=lib" "-DCMAKE_INSTALL_INCLUDEDIR=include" + "-Dbuiltin_nlohmannjson=OFF" + "-Dbuiltin_openui5=OFF" "-Dalien=OFF" "-Dbonjour=OFF" - "-Dbuiltin_llvm=OFF" "-Dcastor=OFF" "-Dchirp=OFF" "-Dclad=OFF" @@ -53,6 +62,7 @@ stdenv.mkDerivation rec { "-Dgfal=OFF" "-Dgviz=OFF" "-Dhdfs=OFF" + "-Dhttp=ON" "-Dkrb5=OFF" "-Dldap=OFF" "-Dmonalisa=OFF" @@ -64,9 +74,11 @@ stdenv.mkDerivation rec { "-Dpythia6=OFF" "-Dpythia8=OFF" "-Drfio=OFF" + "-Droot7=OFF" "-Dsqlite=OFF" "-Dssl=OFF" "-Dvdt=OFF" + "-Dwebgui=OFF" "-Dxml=ON" "-Dxrootd=OFF" ] diff --git a/third_party/nixpkgs/pkgs/applications/science/misc/root/sw_vers.patch b/third_party/nixpkgs/pkgs/applications/science/misc/root/sw_vers.patch index b2ee1b6a4c..836bbb5b17 100644 --- a/third_party/nixpkgs/pkgs/applications/science/misc/root/sw_vers.patch +++ b/third_party/nixpkgs/pkgs/applications/science/misc/root/sw_vers.patch @@ -1,8 +1,8 @@ diff a/cmake/modules/SetUpMacOS.cmake b/cmake/modules/SetUpMacOS.cmake --- a/cmake/modules/SetUpMacOS.cmake +++ b/cmake/modules/SetUpMacOS.cmake -@@ -8,17 +8,10 @@ set(ROOT_ARCHITECTURE macosx) - set(ROOT_PLATFORM macosx) +@@ -28,17 +28,10 @@ if(CMAKE_VERSION VERSION_LESS 3.14.4) + endif() if (CMAKE_SYSTEM_NAME MATCHES Darwin) - EXECUTE_PROCESS(COMMAND sw_vers "-productVersion" @@ -19,16 +19,15 @@ diff a/cmake/modules/SetUpMacOS.cmake b/cmake/modules/SetUpMacOS.cmake #TODO: check haveconfig and rpath -> set rpath true #TODO: check Thread, define link command #TODO: more stuff check configure script -@@ -37,23 +30,7 @@ if (CMAKE_SYSTEM_NAME MATCHES Darwin) +@@ -57,22 +50,7 @@ if (CMAKE_SYSTEM_NAME MATCHES Darwin) + SET(CMAKE_SHARED_LIBRARY_CREATE_CXX_FLAGS "${CMAKE_SHARED_LIBRARY_CREATE_CXX_FLAGS} -m64") SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -m64") SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -m64") - SET(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -m64") - else() -- MESSAGE(STATUS "Found a 32bit system") - SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -m32") - SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -m32") - SET(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -m32") -- endif() + endif() - endif() - - if(MACOSX_VERSION VERSION_GREATER 10.6) @@ -40,11 +39,10 @@ diff a/cmake/modules/SetUpMacOS.cmake b/cmake/modules/SetUpMacOS.cmake - if(MACOSX_VERSION VERSION_GREATER 10.8) - set(MACOSX_GLU_DEPRECATED ON) - endif() -+ endif() if (CMAKE_COMPILER_IS_GNUCXX) - message(STATUS "Found GNU compiler collection") -@@ -115,7 +92,6 @@ if (CMAKE_SYSTEM_NAME MATCHES Darwin) + SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -pipe -W -Wshadow -Wall -Woverloaded-virtual -fsigned-char -fno-common") +@@ -130,7 +108,6 @@ if (CMAKE_SYSTEM_NAME MATCHES Darwin) endif() #---Set Linker flags---------------------------------------------------------------------- diff --git a/third_party/nixpkgs/pkgs/applications/science/misc/snakemake/default.nix b/third_party/nixpkgs/pkgs/applications/science/misc/snakemake/default.nix index 0818ca7962..8919f85e44 100644 --- a/third_party/nixpkgs/pkgs/applications/science/misc/snakemake/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/misc/snakemake/default.nix @@ -2,11 +2,12 @@ python3Packages.buildPythonApplication rec { pname = "snakemake"; - version = "6.0.5"; + version = "6.5.0"; propagatedBuildInputs = with python3Packages; [ appdirs ConfigArgParse + connection-pool datrie docutils filelock @@ -19,13 +20,15 @@ python3Packages.buildPythonApplication rec { ratelimiter requests smart-open + stopit + tabulate toposort wrapt ]; src = python3Packages.fetchPypi { inherit pname version; - sha256 = "9441169034cce46086a8b45486d75175db645b932e766d28fed312ec837792d3"; + sha256 = "b166ec74537e02553fcaf0ddcffc32dfdb9dcaa1260af297a56eded6a179b2ee"; }; doCheck = false; # Tests depend on Google Cloud credentials at ${HOME}/gcloud-service-key.json diff --git a/third_party/nixpkgs/pkgs/applications/science/physics/MCFM/default.nix b/third_party/nixpkgs/pkgs/applications/science/physics/MCFM/default.nix new file mode 100644 index 0000000000..7b6000dfea --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/science/physics/MCFM/default.nix @@ -0,0 +1,33 @@ +{ lib, stdenv, fetchurl, cmake, gfortran, lhapdf }: + +stdenv.mkDerivation rec { + pname = "MCFM"; + version = "10.0.1"; + + src = fetchurl { + url = "https://mcfm.fnal.gov/downloads/${pname}-${version}.tar.gz"; + sha256 = "sha256-3Dg4KoILb0XhgGkzItDh/1opCtYrrIvtbuALYqPUvE8="; + }; + + postPatch = '' + substituteInPlace CMakeLists.txt \ + --replace 'target_link_libraries(mcfm lhapdf_lib)' \ + 'target_link_libraries(mcfm ''${lhapdf_lib})' + ''; + + nativeBuildInputs = [ cmake gfortran ]; + buildInputs = [ lhapdf ]; + + cmakeFlags = [ + "-Duse_external_lhapdf=ON" + "-Duse_internal_lhapdf=OFF" + ]; + + meta = with lib; { + description = "Monte Carlo for FeMtobarn processes"; + homepage = "https://mcfm.fnal.gov"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ veprbl ]; + platforms = lib.platforms.x86_64; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/science/programming/fdr/default.nix b/third_party/nixpkgs/pkgs/applications/science/programming/fdr/default.nix index 8beecf2def..62e4c6876f 100644 --- a/third_party/nixpkgs/pkgs/applications/science/programming/fdr/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/programming/fdr/default.nix @@ -1,9 +1,10 @@ -{lib, stdenv, fetchurl, qtbase, qtx11extras, ncurses5, xorg, zlib, python27Packages}: +{ lib, stdenv, fetchurl, qtbase, qtx11extras, ncurses5, xorg, zlib, python27Packages }: stdenv.mkDerivation { - name = "fdr-4.2.3"; + pname = "fdr"; + version = "4.2.7"; src = fetchurl { - url = "https://www.cs.ox.ac.uk/projects/fdr/downloads/fdr-3789-linux-x86_64.tar.gz"; - sha256 = "0n2yqichym5xdawlgk3r7yha88k7ycnx6585jfrcm7043sls1i88"; + url = "https://dl.cocotec.io/fdr/fdr-3814-linux-x86_64.tar.gz"; + sha256 = "0cajz1gz4slq9nfhm8dqdgxl0kc950838n0lrf8jw4vl54gv6chh"; }; libPath = lib.makeLibraryPath [ @@ -59,7 +60,7 @@ stdenv.mkDerivation { ''; meta = with lib; { - homepage = "https://www.cs.ox.ac.uk/projects/fdr/"; + homepage = "https://cocotec.io/fdr/"; description = "The CSP refinement checker"; license = licenses.unfreeRedistributable; platforms = platforms.linux; diff --git a/third_party/nixpkgs/pkgs/applications/science/robotics/apmplanner2/default.nix b/third_party/nixpkgs/pkgs/applications/science/robotics/apmplanner2/default.nix index e048b881d3..0f5e7e6daa 100644 --- a/third_party/nixpkgs/pkgs/applications/science/robotics/apmplanner2/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/robotics/apmplanner2/default.nix @@ -1,6 +1,6 @@ { lib, mkDerivation, fetchFromGitHub, fetchpatch, qmake , qtbase, qtscript, qtwebkit, qtserialport, qtsvg, qtdeclarative, qtquickcontrols2 -, alsaLib, libsndfile, flite, openssl, udev, SDL2 +, alsa-lib, libsndfile, flite, openssl, udev, SDL2 }: mkDerivation rec { @@ -15,7 +15,7 @@ mkDerivation rec { }; buildInputs = [ - alsaLib libsndfile flite openssl udev SDL2 + alsa-lib libsndfile flite openssl udev SDL2 qtbase qtscript qtwebkit qtserialport qtsvg qtdeclarative qtquickcontrols2 ]; diff --git a/third_party/nixpkgs/pkgs/applications/science/robotics/emuflight-configurator/default.nix b/third_party/nixpkgs/pkgs/applications/science/robotics/emuflight-configurator/default.nix new file mode 100644 index 0000000000..2b89a00eb4 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/science/robotics/emuflight-configurator/default.nix @@ -0,0 +1,50 @@ +{lib, stdenv, fetchurl, unzip, makeDesktopItem, copyDesktopItems, nwjs +, wrapGAppsHook, gsettings-desktop-schemas, gtk3 }: + +stdenv.mkDerivation rec { + pname = "emuflight-configurator"; + version = "0.3.5"; + + src = fetchurl { + url = "https://github.com/emuflight/EmuConfigurator/releases/download/${version}/emuflight-configurator_${version}_linux64.zip"; + sha256 = "d55bdc52cf93d58c728ccb296ef912a5fc0f42c57ed95f3ded5f85d1c10838c4"; + }; + + nativeBuildInputs = [ wrapGAppsHook unzip copyDesktopItems ]; + + buildInputs = [ gsettings-desktop-schemas gtk3 ]; + + installPhase = '' + mkdir -p $out/bin $out/share/${pname} + + cp -r . $out/share/${pname}/ + install -m 444 -D icon/emu_icon_128.png $out/share/icons/hicolor/128x128/apps/${pname}.png + + makeWrapper ${nwjs}/bin/nw $out/bin/${pname} --add-flags $out/share/${pname} + ''; + + desktopItems = [ + (makeDesktopItem { + name = pname; + exec = pname; + icon = pname; + comment = "Emuflight configuration tool"; + desktopName = "Emuflight Configurator"; + genericName = "Flight controller configuration tool"; + }) + ]; + + meta = with lib; { + description = "The Emuflight flight control system configuration tool"; + longDescription = '' + A crossplatform configuration tool for the Emuflight flight control system. + Various types of aircraft are supported by the tool and by Emuflight, e.g. + quadcopters, hexacopters, octocopters and fixed-wing aircraft. + The application allows you to configure the Emuflight software running on any supported Emuflight target. + ''; + homepage = "https://github.com/emuflight/EmuConfigurator"; + license = licenses.gpl3Only; + maintainers = with maintainers; [ beezow ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/science/robotics/mavproxy/default.nix b/third_party/nixpkgs/pkgs/applications/science/robotics/mavproxy/default.nix index 2652856511..ba0c253084 100644 --- a/third_party/nixpkgs/pkgs/applications/science/robotics/mavproxy/default.nix +++ b/third_party/nixpkgs/pkgs/applications/science/robotics/mavproxy/default.nix @@ -3,11 +3,11 @@ buildPythonApplication rec { pname = "MAVProxy"; - version = "1.8.37"; + version = "1.8.39"; src = fetchPypi { inherit pname version; - sha256 = "0527c65b55652a130c44c131cce5644cc5ac00a3f85edb81899f79f5e3ee16fb"; + sha256 = "sha256-1RXuAiz9i5ZnLtDGQ+o3DNgWJ2FDJGIoelmlDmEzrts="; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/applications/system/monitor/default.nix b/third_party/nixpkgs/pkgs/applications/system/monitor/default.nix index 11bdeeb3bf..588839b859 100644 --- a/third_party/nixpkgs/pkgs/applications/system/monitor/default.nix +++ b/third_party/nixpkgs/pkgs/applications/system/monitor/default.nix @@ -11,7 +11,7 @@ , glib , gtk3 , bamf -, libwnck3 +, libwnck , libgee , libgtop , wrapGAppsHook @@ -47,7 +47,7 @@ stdenv.mkDerivation rec { pantheon.wingpanel libgee libgtop - libwnck3 + libwnck ]; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/applications/terminal-emulators/contour/default.nix b/third_party/nixpkgs/pkgs/applications/terminal-emulators/contour/default.nix new file mode 100644 index 0000000000..864a9e7c48 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/terminal-emulators/contour/default.nix @@ -0,0 +1,27 @@ +{ lib, mkDerivation, fetchFromGitHub, cmake, pkg-config, freetype, libGL, pcre }: + +mkDerivation rec { + pname = "contour"; + version = "0.1.1"; + + src = fetchFromGitHub { + owner = "christianparpart"; + repo = pname; + rev = "v${version}"; + sha256 = "sha256-P7t+M75ZWjFcGWngcbaurdit6e+pb0ILljimhYqW0NI="; + fetchSubmodules = true; + }; + + nativeBuildInputs = [ cmake pkg-config ]; + + buildInputs = [ freetype libGL pcre ]; + + meta = with lib; { + description = "Modern C++ Terminal Emulator"; + homepage = "https://github.com/christianparpart/contour"; + changelog = "https://github.com/christianparpart/contour/blob/HEAD/Changelog.md"; + license = licenses.asl20; + maintainers = with maintainers; [ fortuneteller2k ]; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/terminal-emulators/foot/default.nix b/third_party/nixpkgs/pkgs/applications/terminal-emulators/foot/default.nix index 5062329834..f69625e16c 100644 --- a/third_party/nixpkgs/pkgs/applications/terminal-emulators/foot/default.nix +++ b/third_party/nixpkgs/pkgs/applications/terminal-emulators/foot/default.nix @@ -16,6 +16,7 @@ , tllist , wayland-protocols , pkg-config +, utf8proc , allowPgo ? true , python3 # for PGO # for clang stdenv check @@ -25,7 +26,7 @@ }: let - version = "1.7.2"; + version = "1.8.0"; # build stimuli file for PGO build and the script to generate it # independently of the foot's build, so we can cache the result @@ -39,7 +40,7 @@ let src = fetchurl { url = "https://codeberg.org/dnkl/foot/raw/tag/${version}/scripts/generate-alt-random-writes.py"; - sha256 = "019bdiqfi3wx2lwrv3nhq83knc1r3lmqd5zgisa33wwshm2kyv7p"; + sha256 = "0w4d0rxi54p8lvbynypcywqqwbbzmyyzc0svjab27ngmdj1034ii"; }; dontUnpack = true; @@ -93,7 +94,7 @@ stdenv.mkDerivation rec { src = fetchzip { url = "https://codeberg.org/dnkl/${pname}/archive/${version}.tar.gz"; - sha256 = "0iabj9c0dj1r0m89i5gk2jdmwj4wfsai8na54x2w4fq406q6g9nh"; + sha256 = "07irlhkvziv51cp5zn1yz8ljfnrnfjcykv5pgfwmpslw3nl5szxv"; }; nativeBuildInputs = [ @@ -115,6 +116,7 @@ stdenv.mkDerivation rec { wayland libxkbcommon fcft + utf8proc ]; # recommended build flags for performance optimized foot builds @@ -129,7 +131,11 @@ stdenv.mkDerivation rec { export AR="${ar}" ''; - mesonFlags = [ "--buildtype=release" "-Db_lto=true" ]; + mesonFlags = [ + "--buildtype=release" + "-Db_lto=true" + "-Dterminfo-install-location=${placeholder "terminfo"}/share/terminfo" + ]; # build and run binary generating PGO profiles, # then reconfigure to build the normal foot binary utilizing PGO @@ -146,6 +152,15 @@ stdenv.mkDerivation rec { llvm-profdata merge default_*profraw --output=default.profdata ''; + outputs = [ "out" "terminfo" ]; + + # make sure nix-env and buildEnv also include the + # terminfo output when the package is installed + postInstall = '' + mkdir -p "$out/nix-support" + echo "$terminfo" >> "$out/nix-support/propagated-user-env-packages" + ''; + passthru.tests = { clang-default-compilation = foot.override { inherit (llvmPackages) stdenv; diff --git a/third_party/nixpkgs/pkgs/applications/terminal-emulators/guake/default.nix b/third_party/nixpkgs/pkgs/applications/terminal-emulators/guake/default.nix index 62cb6707c1..8c4c6b383d 100644 --- a/third_party/nixpkgs/pkgs/applications/terminal-emulators/guake/default.nix +++ b/third_party/nixpkgs/pkgs/applications/terminal-emulators/guake/default.nix @@ -9,7 +9,7 @@ , libnotify , libutempter , vte -, libwnck3 +, libwnck }: python3.pkgs.buildPythonApplication rec { @@ -41,7 +41,7 @@ python3.pkgs.buildPythonApplication rec { gtk3 keybinder3 libnotify - libwnck3 + libwnck python3 vte ]; diff --git a/third_party/nixpkgs/pkgs/applications/terminal-emulators/hyper/default.nix b/third_party/nixpkgs/pkgs/applications/terminal-emulators/hyper/default.nix index 7dd495f977..55798ed609 100644 --- a/third_party/nixpkgs/pkgs/applications/terminal-emulators/hyper/default.nix +++ b/third_party/nixpkgs/pkgs/applications/terminal-emulators/hyper/default.nix @@ -1,13 +1,13 @@ { stdenv, lib, fetchurl, dpkg, atk, glib, pango, gdk-pixbuf, gnome2, gtk3, cairo , freetype, fontconfig, dbus, libXi, libXcursor, libXdamage, libXrandr , libXcomposite, libXext, libXfixes, libXrender, libX11, libXtst, libXScrnSaver -, libxcb, nss, nspr, alsaLib, cups, expat, udev, libpulseaudio, at-spi2-atk }: +, libxcb, nss, nspr, alsa-lib, cups, expat, udev, libpulseaudio, at-spi2-atk }: let libPath = lib.makeLibraryPath [ stdenv.cc.cc gtk3 gnome2.GConf atk glib pango gdk-pixbuf cairo freetype fontconfig dbus libXi libXcursor libXdamage libXrandr libXcomposite libXext libXfixes libxcb - libXrender libX11 libXtst libXScrnSaver nss nspr alsaLib cups expat udev libpulseaudio + libXrender libX11 libXtst libXScrnSaver nss nspr alsa-lib cups expat udev libpulseaudio at-spi2-atk ]; in diff --git a/third_party/nixpkgs/pkgs/applications/terminal-emulators/kitty/default.nix b/third_party/nixpkgs/pkgs/applications/terminal-emulators/kitty/default.nix index 3b0d302804..e101d5d3a8 100644 --- a/third_party/nixpkgs/pkgs/applications/terminal-emulators/kitty/default.nix +++ b/third_party/nixpkgs/pkgs/applications/terminal-emulators/kitty/default.nix @@ -21,14 +21,14 @@ with python3Packages; buildPythonApplication rec { pname = "kitty"; - version = "0.20.3"; + version = "0.21.1"; format = "other"; src = fetchFromGitHub { owner = "kovidgoyal"; repo = "kitty"; rev = "v${version}"; - sha256 = "sha256-rORIrbUqtQZuU6TjjYP7IZHfCPeLnrNy6wInnAwhG48="; + sha256 = "sha256-/+OSVjC4++A4kaxEfI2kIgjXxL67lfoXCdH2PykLWxA="; }; buildInputs = [ @@ -63,26 +63,26 @@ buildPythonApplication rec { outputs = [ "out" "terminfo" ]; - patches = [ - ./fix-paths.patch - ]; - # Causes build failure due to warning hardeningDisable = lib.optional stdenv.cc.isClang "strictoverflow"; dontConfigure = true; - buildPhase = if stdenv.isDarwin then '' - ${python.interpreter} setup.py kitty.app \ - --update-check-interval=0 \ - --disable-link-time-optimization - make man - '' else '' - ${python.interpreter} setup.py linux-package \ - --update-check-interval=0 \ - --egl-library='${lib.getLib libGL}/lib/libEGL.so.1' \ - --startup-notification-library='${libstartup_notification}/lib/libstartup-notification-1.so' \ - --canberra-library='${libcanberra}/lib/libcanberra.so' + buildPhase = '' + runHook preBuild + ${if stdenv.isDarwin then '' + ${python.interpreter} setup.py kitty.app \ + --update-check-interval=0 \ + --disable-link-time-optimization + make man + '' else '' + ${python.interpreter} setup.py linux-package \ + --update-check-interval=0 \ + --egl-library='${lib.getLib libGL}/lib/libEGL.so.1' \ + --startup-notification-library='${libstartup_notification}/lib/libstartup-notification-1.so' \ + --canberra-library='${libcanberra}/lib/libcanberra.so' + ''} + runHook postBuild ''; checkInputs = [ pillow ]; diff --git a/third_party/nixpkgs/pkgs/applications/terminal-emulators/kitty/fix-paths.patch b/third_party/nixpkgs/pkgs/applications/terminal-emulators/kitty/fix-paths.patch deleted file mode 100644 index 380f6d7491..0000000000 --- a/third_party/nixpkgs/pkgs/applications/terminal-emulators/kitty/fix-paths.patch +++ /dev/null @@ -1,16 +0,0 @@ ---- a/docs/Makefile -+++ b/docs/Makefile -@@ -3,7 +3,7 @@ -# Patching is needed here for the following reason: -# * importing the `constants` package from Kitty has a side effect that it -# creates the user configuration directory. This package gets imported -# while sphinx scans the code for documentation strings. -# - - # You can set these variables from the command line. - SPHINXOPTS = -j auto -T $(FAIL_WARN) --SPHINXBUILD = sphinx-build -+SPHINXBUILD = PYTHONPATH=${PYTHONPATH}:.. HOME=${TMPDIR}/kitty-build-home sphinx-build - SPHINXPROJ = kitty - SOURCEDIR = . - BUILDDIR = _build diff --git a/third_party/nixpkgs/pkgs/applications/terminal-emulators/rxvt-unicode-plugins/urxvt-font-size/default.nix b/third_party/nixpkgs/pkgs/applications/terminal-emulators/rxvt-unicode-plugins/urxvt-font-size/default.nix index beecb3e278..88dae0a34f 100644 --- a/third_party/nixpkgs/pkgs/applications/terminal-emulators/rxvt-unicode-plugins/urxvt-font-size/default.nix +++ b/third_party/nixpkgs/pkgs/applications/terminal-emulators/rxvt-unicode-plugins/urxvt-font-size/default.nix @@ -1,14 +1,14 @@ { lib, stdenv, fetchFromGitHub, xrdb, xlsfonts }: -stdenv.mkDerivation { - name = "urxvt-font-size-2015-05-22"; - dontPatchShebangs = true; +stdenv.mkDerivation rec { + name = "urxvt-font-size"; + version = "1.3"; src = fetchFromGitHub { owner = "majutsushi"; repo = "urxvt-font-size"; - rev = "fd5b09c10798c6723bbf771d4d8881cf6563bc69"; - sha256 = "16m3kkypg3y00x597zx05zy167a0kaqpawz0l591wzb2bv1dz55z"; + rev = "v${version}"; + sha256 = "1526ap161cp3378f4ijd09nmsh71ld7bkxxhp8p6razdi2v8r16h"; }; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/terminal-emulators/sakura/default.nix b/third_party/nixpkgs/pkgs/applications/terminal-emulators/sakura/default.nix index af56f54a41..fbebf6590d 100644 --- a/third_party/nixpkgs/pkgs/applications/terminal-emulators/sakura/default.nix +++ b/third_party/nixpkgs/pkgs/applications/terminal-emulators/sakura/default.nix @@ -1,30 +1,41 @@ -{ lib, stdenv +{ lib +, stdenv , fetchurl , cmake -, pkg-config -, gtk3 -, perl -, vte -, pcre2 , glib +, gtk3 , makeWrapper +, pcre2 +, perl +, pkg-config +, vte }: stdenv.mkDerivation rec { pname = "sakura"; - version = "3.7.1"; + version = "3.8.2"; src = fetchurl { url = "https://launchpad.net/${pname}/trunk/${version}/+download/${pname}-${version}.tar.bz2"; - sha256 = "sha256-cppODnUKQpS9kFkkOqxU3yqAElAVn8VQtQsP4Carkos="; + sha256 = "sha256-nd/okZrg4RZzyiKHmuMkVl0Jh7FOlI4dK63/U4/htbk="; }; - nativeBuildInputs = [ cmake perl pkg-config makeWrapper ]; + nativeBuildInputs = [ + cmake + makeWrapper + perl + pkg-config + ]; - buildInputs = [ gtk3 vte pcre2 glib ]; + buildInputs = [ + glib + gtk3 + pcre2 + vte + ]; - # Set path to gsettings-schemata so sakura knows - # where to find colorchooser, fontchooser etc. + # Set path to gsettings-schemata so sakura knows where to find colorchooser, + # fontchooser etc. postInstall = '' wrapProgram $out/bin/sakura \ --suffix XDG_DATA_DIRS : ${gtk3}/share/gsettings-schemas/${gtk3.name}/ diff --git a/third_party/nixpkgs/pkgs/applications/terminal-emulators/terminus/default.nix b/third_party/nixpkgs/pkgs/applications/terminal-emulators/terminus/default.nix index 87394241ef..7631282b3a 100644 --- a/third_party/nixpkgs/pkgs/applications/terminal-emulators/terminus/default.nix +++ b/third_party/nixpkgs/pkgs/applications/terminal-emulators/terminus/default.nix @@ -2,13 +2,13 @@ , freetype, fontconfig, dbus, libXi, libXcursor, libXdamage, libXrandr , libXcomposite, libXext, libXfixes, libXrender, libX11, libXtst, libXScrnSaver , libxcb, makeWrapper, nodejs -, nss, nspr, alsaLib, cups, expat, systemd, libpulseaudio }: +, nss, nspr, alsa-lib, cups, expat, systemd, libpulseaudio }: let libPath = lib.makeLibraryPath [ stdenv.cc.cc gtk2 atk glib pango gdk-pixbuf cairo freetype fontconfig dbus libXi libXcursor libXdamage libXrandr libXcomposite libXext libXfixes libxcb - libXrender libX11 libXtst libXScrnSaver gnome2.GConf nss nspr alsaLib cups expat systemd libpulseaudio + libXrender libX11 libXtst libXScrnSaver gnome2.GConf nss nspr alsa-lib cups expat systemd libpulseaudio ]; in stdenv.mkDerivation rec { diff --git a/third_party/nixpkgs/pkgs/applications/terminal-emulators/xterm/default.nix b/third_party/nixpkgs/pkgs/applications/terminal-emulators/xterm/default.nix index a5db506570..eafa893037 100644 --- a/third_party/nixpkgs/pkgs/applications/terminal-emulators/xterm/default.nix +++ b/third_party/nixpkgs/pkgs/applications/terminal-emulators/xterm/default.nix @@ -14,6 +14,14 @@ stdenv.mkDerivation rec { sha256 = "07y51l06n344pjyxdddq6sdvxw25nl10irl4avynkqjnqyqsiw97"; }; + strictDeps = true; + + nativeBuildInputs = [ + makeWrapper + pkg-config + fontconfig + ]; + buildInputs = [ xorg.libXaw xorg.xorgproto @@ -24,11 +32,8 @@ stdenv.mkDerivation rec { xorg.libICE ncurses freetype - fontconfig - pkg-config xorg.libXft xorg.luit - makeWrapper ]; patches = [ ./sixel-256.support.patch ] diff --git a/third_party/nixpkgs/pkgs/applications/version-management/cvs-fast-export/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/cvs-fast-export/default.nix index ffd583585c..a14af17c01 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/cvs-fast-export/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/cvs-fast-export/default.nix @@ -1,31 +1,23 @@ -{lib, stdenv, fetchurl, makeWrapper, flex, bison, - asciidoc, docbook_xml_dtd_45, docbook_xsl, - libxml2, libxslt, - python3, rcs, cvs, git, - coreutils, rsync}: -with stdenv; with lib; -mkDerivation rec { - name = "cvs-fast-export-${meta.version}"; - meta = { - version = "1.56"; - description = "Export an RCS or CVS history as a fast-import stream"; - license = licenses.gpl2Plus; - maintainers = with maintainers; [ dfoxfranke ]; - homepage = "http://www.catb.org/esr/cvs-fast-export/"; - platforms = platforms.all; - }; +{ lib, stdenv, fetchurl, makeWrapper, asciidoc, docbook_xml_dtd_45, docbook_xsl +, coreutils, cvs, diffutils, findutils, git, python3, rsync +}: + +stdenv.mkDerivation rec { + pname = "cvs-fast-export"; + version = "1.57"; src = fetchurl { - url = "http://www.catb.org/~esr/cvs-fast-export/cvs-fast-export-1.56.tar.gz"; - sha256 = "sha256-TB/m7kd91+PyAkGdFCCgeb9pQh0kacq0QuTZa8f9CxU="; + url = "http://www.catb.org/~esr/cvs-fast-export/cvs-fast-export-${version}.tar.gz"; + sha256 = "0y1fzsicga19nsarpmn2ms69sq26b2d3d8a1169qbqz1kzr0jji8"; }; - buildInputs = [ - flex bison asciidoc docbook_xml_dtd_45 docbook_xsl libxml2 libxslt - python3 rcs cvs git makeWrapper - ]; + strictDeps = true; + nativeBuildInputs = [ makeWrapper asciidoc ]; + buildInputs = [ python3 ]; - postPatch = "patchShebangs ."; + postPatch = '' + patchShebangs . + ''; preBuild = '' makeFlagsArray=( @@ -35,16 +27,18 @@ mkDerivation rec { ) ''; - doCheck = true; + postInstall = '' + wrapProgram $out/bin/cvssync --prefix PATH : ${lib.makeBinPath [ rsync ]} + wrapProgram $out/bin/cvsconvert --prefix PATH : $out/bin:${lib.makeBinPath [ + coreutils cvs diffutils findutils git + ]} + ''; - postInstall = - let - binpath = makeBinPath [ out rcs cvs git coreutils rsync ]; - in '' - for prog in cvs-fast-export cvsconvert cvssync; do - wrapProgram $out/bin/$prog \ - --prefix PATH : ${binpath} - done - '' - ; + meta = with lib; { + description = "Export an RCS or CVS history as a fast-import stream"; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ dfoxfranke ]; + homepage = "http://www.catb.org/esr/cvs-fast-export/"; + platforms = platforms.unix; + }; } diff --git a/third_party/nixpkgs/pkgs/applications/version-management/fossil/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/fossil/default.nix index af2ed175ac..c15d833dfb 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/fossil/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/fossil/default.nix @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { pname = "fossil"; - version = "2.14"; + version = "2.15.1"; src = fetchurl { urls = @@ -23,23 +23,21 @@ stdenv.mkDerivation rec { "https://www.fossil-scm.org/index.html/uv/fossil-src-${version}.tar.gz" ]; name = "${pname}-${version}.tar.gz"; - sha256 = "sha256-uNDJIBlt2K4pFS+nRI5ROh+nxYiHG3heP7/Ae0KgX7k="; + sha256 = "sha256-gNJ5I8ZjsqLHEPiujNVJhi4E+MBChXBidMNK48jKF9E="; }; - nativeBuildInputs = [ installShellFiles tcl ]; + nativeBuildInputs = [ installShellFiles tcl tcllib ]; buildInputs = [ zlib openssl readline sqlite which ed ] ++ lib.optional stdenv.isDarwin libiconv; + enableParallelBuilding = true; + doCheck = stdenv.hostPlatform == stdenv.buildPlatform; configureFlags = [ "--disable-internal-sqlite" ] ++ lib.optional withJson "--json"; - preCheck = '' - export TCLLIBPATH="${tcllib}/lib/tcllib${tcllib.version}" - ''; - preBuild = '' export USER=nonexistent-but-specified-user ''; @@ -61,8 +59,9 @@ stdenv.mkDerivation rec { many such systems in use today. Fossil strives to distinguish itself from the others by being extremely simple to setup and operate. ''; - homepage = "http://www.fossil-scm.org/"; + homepage = "https://www.fossil-scm.org/"; license = licenses.bsd2; maintainers = with maintainers; [ maggesi viric ]; + platforms = platforms.all; }; } diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gerrit/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/gerrit/default.nix index d23f284704..d9ebdbf531 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gerrit/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gerrit/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "gerrit"; - version = "3.3.2"; + version = "3.4.0"; src = fetchurl { url = "https://gerrit-releases.storage.googleapis.com/gerrit-${version}.war"; - sha256 = "sha256-tqlJANxJl2r0ZxPb7d8KU9cRMQUFPUIm/zMp4zREGL0="; + sha256 = "sha256-GNUpSK9cczGISyvo05KrLzeO+zRm5dEYOmX2Oy7TjzE="; }; buildCommand = '' diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/delta/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/delta/default.nix index f642a7d9af..1afee78089 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/delta/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/delta/default.nix @@ -9,16 +9,16 @@ rustPlatform.buildRustPackage rec { pname = "delta"; - version = "0.8.0"; + version = "0.8.1"; src = fetchFromGitHub { owner = "dandavison"; repo = pname; rev = version; - sha256 = "01s73ld3npdmrjbay1lmd13bn9lg2pbmj14gklxi3j9aj0y2q8w8"; + sha256 = "sha256-YS4XuP5V7HLhz6PTwbz4mqVdzRDQvpwwL7oYeQW8Xcs="; }; - cargoSha256 = "1pi4sm07nm1irigrfgysfw99vw96zzz07a1qw5m7bmj6aqp0r3fr"; + cargoSha256 = "sha256-wX7x6SbbEWFBo5HeXTjb3r4IJ2leP4T0nVqf43Bl94k="; nativeBuildInputs = [ installShellFiles ]; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/diff-so-fancy/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/diff-so-fancy/default.nix index 77ad7d8658..95060714c2 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/diff-so-fancy/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/diff-so-fancy/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "diff-so-fancy"; - version = "1.4.1"; + version = "1.4.2"; src = fetchFromGitHub { owner = "so-fancy"; repo = "diff-so-fancy"; rev = "v${version}"; - sha256 = "sha256-bV22x459QerWg4MVLWsXPDhM38QWG6BE+dVmKIFfDiE="; + sha256 = "sha256-1kBarsRiuB8fv7VLlWfpotPfHeMrfmIXHXTFu8TzC2A="; }; nativeBuildInputs = [ @@ -52,6 +52,6 @@ stdenv.mkDerivation rec { diff-so-fancy builds on the good-lookin' output of git contrib's diff-highlight to upgrade your diffs' appearances. ''; - maintainers = with maintainers; [ fpletz globin ]; + maintainers = with maintainers; [ fpletz globin ma27 ]; }; } diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/ghr/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/ghr/default.nix index be6d64646a..5570dbf101 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/ghr/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/ghr/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "ghr"; - version = "0.13.0"; + version = "0.14.0"; src = fetchFromGitHub { owner = "tcnksm"; repo = "ghr"; rev = "v${version}"; - sha256 = "1nm5kdjkqayxh06j9nr5daic9sw9nx9w06y9gaqhdrw9byvjpr1a"; + sha256 = "sha256-pF1TPvQLPa5BbXZ9rRCq7xWofXCBRa9CDgNxX/kaTMo="; }; - vendorSha256 = "14avsngzhl1b8a05i43ph6sxh9vj0jls0acxr9j7r0h3f0vpamcj"; + vendorSha256 = "sha256-+e9Q4Pw9pJyOXVz85KhOSuybj1PBcJi51fGR3a2Gixk="; # Tests require a Github API token, and networking doCheck = false; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-branchless/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-branchless/default.nix new file mode 100644 index 0000000000..c80db8ee95 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-branchless/default.nix @@ -0,0 +1,49 @@ +{ lib, fetchFromGitHub + +, coreutils +, git +, ncurses +, rustPlatform +, sqlite +}: + +rustPlatform.buildRustPackage rec { + pname = "git-branchless"; + version = "0.3.2"; + + src = fetchFromGitHub { + owner = "arxanas"; + repo = "git-branchless"; + rev = "v${version}"; + sha256 = "0pfiyb23ah1h6risrhjr8ky7b1k1f3yfc3z70s92q3czdlrk6k07"; + }; + + cargoSha256 = "0gplx80xhpz8kwry7l4nv4rlj9z02jg0sgb6zy1y3vd9s2j5wals"; + + # Remove path hardcodes patching if they get fixed upstream, see: + # https://github.com/arxanas/git-branchless/issues/26 + postPatch = '' + # Inline test hardcodes `echo` location. + substituteInPlace ./src/commands/wrap.rs --replace '/bin/echo' '${coreutils}/bin/echo' + + # Tests in general hardcode `git` location. + substituteInPlace ./src/testing.rs --replace '/usr/bin/git' '${git}/bin/git' + ''; + + buildInputs = [ + ncurses + sqlite + ]; + + preCheck = '' + # Tests require path to git. + export PATH_TO_GIT=${git}/bin/git + ''; + + meta = with lib; { + description = "A suite of tools to help you visualize, navigate, manipulate, and repair your commit history"; + homepage = "https://github.com/arxanas/git-branchless"; + license = licenses.asl20; + maintainers = with maintainers; [ nh2 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-filter-repo/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-filter-repo/default.nix index 864ef51a58..c67fb1532a 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-filter-repo/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-filter-repo/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "git-filter-repo"; - version = "2.29.0"; + version = "2.32.0"; src = fetchurl { url = "https://github.com/newren/git-filter-repo/releases/download/v${version}/${pname}-${version}.tar.xz"; - sha256 = "00nn7k9jqrybb762486fmigsnbcn9lbvimgpfvvarz4ikdp9y9pb"; + sha256 = "sha256-CztFSyeKM9Bmcf0eSrLHH3vHGepd8WXPvcAACT+vFps="; }; buildInputs = [ pythonPackages.python ]; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-machete/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-machete/default.nix index f93947d051..3dd241840c 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-machete/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-machete/default.nix @@ -4,11 +4,11 @@ buildPythonApplication rec { pname = "git-machete"; - version = "3.1.1"; + version = "3.2.1"; src = fetchPypi { inherit pname version; - sha256 = "00f1rq80vya464dkvf3mzs9zpvkz15ki8srwg08snsm5kb7amwlm"; + sha256 = "1sw6b1jaddacfm4kvvhgxn743khmsi1c4b4f5mgvm3rabv0h473h"; }; nativeBuildInputs = [ installShellFiles pbr ]; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-vendor/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-vendor/default.nix index 8e3b9f1367..c7884c2b52 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-vendor/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git-vendor/default.nix @@ -2,8 +2,8 @@ }: let - version = "1.2.0"; - sha256 = "1z9fmrfxqi56pj7f1506q2z41crz702jk88gv57baf6fz63m93v2"; + version = "1.2.1"; + sha256 = "sha256-sm5SmckaXVjF3odqzYrbC46E1nPzQ9cuNJnNSAa7RWY="; in stdenv.mkDerivation { pname = "git-vendor"; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git/default.nix index 8ad150f130..075524340b 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/git/default.nix @@ -2,7 +2,7 @@ , curl, openssl, zlib, expat, perlPackages, python3, gettext, cpio , gnugrep, gnused, gawk, coreutils # needed at runtime by git-filter-branch etc , openssh, pcre2 -, asciidoctor, texinfo, xmlto, docbook2x, docbook_xsl, docbook_xsl_ns, docbook_xml_dtd_45 +, asciidoc, texinfo, xmlto, docbook2x, docbook_xsl, docbook_xml_dtd_45 , libxslt, tcl, tk, makeWrapper, libiconv , svnSupport, subversionClient, perlLibs, smtpPerlLibs , perlSupport ? stdenv.buildPlatform == stdenv.hostPlatform @@ -25,7 +25,7 @@ assert sendEmailSupport -> perlSupport; assert svnSupport -> perlSupport; let - version = "2.31.1"; + version = "2.32.0"; svn = subversionClient.override { perlBindings = perlSupport; }; gitwebPerlLibs = with perlPackages; [ CGI HTMLParser CGIFast FCGI FCGIProcManager HTMLTagCloud ]; @@ -37,7 +37,7 @@ stdenv.mkDerivation { src = fetchurl { url = "https://www.kernel.org/pub/software/scm/git/git-${version}.tar.xz"; - sha256 = "10367n5sv4nsgaxy486pbp7nscx34vjk8vrb06jm9ffm8ix42qcz"; + sha256 = "08rnm3ipjqdd2n31dw7mxl3iv9g4nxgc409krmz892a37kd43a38"; }; outputs = [ "out" ] ++ lib.optional withManual "doc"; @@ -68,8 +68,8 @@ stdenv.mkDerivation { ''; nativeBuildInputs = [ gettext perlPackages.perl makeWrapper ] - ++ lib.optionals withManual [ asciidoctor texinfo xmlto docbook2x - docbook_xsl docbook_xsl_ns docbook_xml_dtd_45 libxslt ]; + ++ lib.optionals withManual [ asciidoc texinfo xmlto docbook2x + docbook_xsl docbook_xml_dtd_45 libxslt ]; buildInputs = [curl openssl zlib expat cpio libiconv] ++ lib.optionals perlSupport [ perlPackages.perl ] ++ lib.optionals guiSupport [tcl tk] @@ -78,7 +78,7 @@ stdenv.mkDerivation { ++ lib.optionals withLibsecret [ pkg-config glib libsecret ]; # required to support pthread_cancel() - NIX_LDFLAGS = lib.optionalString (!stdenv.cc.isClang) "-lgcc_s" + NIX_LDFLAGS = lib.optionalString (stdenv.cc.isGNU && stdenv.hostPlatform.libc == "glibc") "-lgcc_s" + lib.optionalString (stdenv.isFreeBSD) "-lthr"; configureFlags = lib.optionals (stdenv.buildPlatform != stdenv.hostPlatform) [ @@ -148,7 +148,7 @@ stdenv.mkDerivation { } # Install git-subtree. - make -C contrib/subtree install ${lib.optionalString withManual "USE_ASCIIDOCTOR=1 install-doc"} + make -C contrib/subtree install ${lib.optionalString withManual "install-doc"} rm -rf contrib/subtree # Install contrib stuff. @@ -233,7 +233,7 @@ stdenv.mkDerivation { '') + lib.optionalString withManual ''# Install man pages - make -j $NIX_BUILD_CORES -l $NIX_BUILD_CORES USE_ASCIIDOCTOR=1 PERL_PATH="${buildPackages.perl}/bin/perl" cmd-list.made install install-html \ + make -j $NIX_BUILD_CORES -l $NIX_BUILD_CORES PERL_PATH="${buildPackages.perl}/bin/perl" cmd-list.made install install-html \ -C Documentation '' + (if guiSupport then '' @@ -290,11 +290,13 @@ stdenv.mkDerivation { fi } - # Shared permissions are forbidden in sandbox builds. - disable_test t0001-init shared + # Shared permissions are forbidden in sandbox builds: + substituteInPlace t/test-lib.sh \ + --replace "test_set_prereq POSIXPERM" "" + # TODO: Investigate while these still fail (without POSIXPERM): + disable_test t0001-init 'shared overrides system' + disable_test t0001-init 'init honors global core.sharedRepository' disable_test t1301-shared-repo - disable_test t5324-split-commit-graph 'split commit-graph respects core.sharedrepository' - disable_test t4129-apply-samemode 'do not use core.sharedRepository for working tree files' # Our patched gettext never fallbacks disable_test t0201-gettext-fallbacks diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/gitstatus/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/gitstatus/default.nix index f4b74405eb..ab0ce9c7cd 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/gitstatus/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/gitstatus/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "gitstatus"; - version = "1.4.4"; + version = "1.5.2"; src = fetchFromGitHub { owner = "romkatv"; repo = "gitstatus"; rev = "v${version}"; - sha256 = "1w5kpca2v6iii912riywp1jscq7cpr5xv93mglr30pjnar1mk8gs"; + sha256 = "sha256-MQG4thW73gDqY68bKP2FO8z5uc2R/tED+/X9qas/GOA="; }; buildInputs = [ (callPackage ./romkatv_libgit2.nix {}) ]; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/gitui/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/gitui/default.nix index 6331ab32ac..3049012160 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/gitui/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/gitui/default.nix @@ -1,16 +1,16 @@ { lib, stdenv, rustPlatform, fetchFromGitHub, libiconv, perl, python3, Security, AppKit, openssl, xclip }: rustPlatform.buildRustPackage rec { pname = "gitui"; - version = "0.16.0"; + version = "0.16.1"; src = fetchFromGitHub { owner = "extrawurst"; repo = pname; rev = "v${version}"; - sha256 = "sha256-XPXldkNLlxgUBdDDR+n3JAO75JQQOvKoduwnWvIompY="; + sha256 = "sha256-8RPIPimDImLUR9oHVZZ7ZeKLtIhebv/d0kl4CQ5NFdU="; }; - cargoSha256 = "sha256-jHrjAdghuFADf/Gd3GeUOpPBG5tqsBG/Q4R0pNxHAps="; + cargoSha256 = "sha256-1IHbOjZV8Rc0el7J983B8pvnbt8+QtYiknZU/I85OnY="; nativeBuildInputs = [ python3 perl ]; buildInputs = [ openssl ] diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/glab/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/glab/default.nix index c810598d7c..f2a5e2368b 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/glab/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/glab/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "glab"; - version = "1.17.0"; + version = "1.18.1"; src = fetchFromGitHub { owner = "profclems"; repo = pname; rev = "v${version}"; - sha256 = "sha256-UW6KYqqeDnswPSHrjprbClnIwpX5zA+ePq7kwlsWEfA="; + sha256 = "sha256-ahP5y5i0SMj2+mP4RYc7MLZGElX5eLgKwiVhBYGOX2g="; }; - vendorSha256 = "sha256-5hVIwEG70r9EDyapQ/OBlHfA1Zw5y4KxEysX415t3xk="; + vendorSha256 = "sha256-ssVmqcJ/DxUqAkHm9tn4RwWuKzTHvxoqJquXPIRy4b8="; runVend = true; # Tests are trying to access /homeless-shelter diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/lefthook/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/lefthook/default.nix index 264677dc1c..374e68a71c 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/lefthook/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-and-tools/lefthook/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "lefthook"; - version = "0.7.5"; + version = "0.7.6"; src = fetchFromGitHub { rev = "v${version}"; owner = "evilmartians"; repo = "lefthook"; - sha256 = "sha256-IKrutZJhs2iuwhXoV+81rDoaSi/xdYRpIlF1YjGFGY4="; + sha256 = "sha256-qCj6FsbzxnMISCITKFcIIYtqMiHzSNYNjlpgpE9S/Ss="; }; vendorSha256 = "sha256-Rp67FnFU27u85t02MIs7wZQoOa8oGsHVVPQ9OdIyTJg="; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/git-repo/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/git-repo/default.nix index 75a9fe3776..c84375cfec 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/git-repo/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/git-repo/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "git-repo"; - version = "2.15.3"; + version = "2.15.4"; src = fetchFromGitHub { owner = "android"; repo = "tools_repo"; rev = "v${version}"; - sha256 = "sha256-SuHp6C5ueUErvRiWDQNEmCybFIa7Iu7C/FtnHys9XqU="; + sha256 = "1ayw2pz9falcsi528q63z3w7npzkk7y8z258danqh41j6q9871js"; }; # Fix 'NameError: name 'ssl' is not defined' diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitea/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/gitea/default.nix index e92a5a38a2..96f3af5162 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitea/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitea/default.nix @@ -16,12 +16,12 @@ with lib; buildGoPackage rec { pname = "gitea"; - version = "1.14.2"; + version = "1.14.3"; # not fetching directly from the git repo, because that lacks several vendor files for the web UI src = fetchurl { url = "https://github.com/go-gitea/gitea/releases/download/v${version}/gitea-src-${version}.tar.gz"; - sha256 = "sha256-0EvKk0/ro1YAqvc5yCt8vn2LkRoIbXrFTwcQtomoWsM="; + sha256 = "sha256-ieQxqZO84sYBcCzWYn40tRGLgSs2PpLlcNkI4vFq+wE="; }; unpackPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitkraken/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/gitkraken/default.nix index 2f19e0693c..c0cc9d5e2b 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitkraken/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitkraken/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, libXcomposite, libgnome-keyring, makeWrapper, udev, curl, alsaLib +{ lib, stdenv, libXcomposite, libgnome-keyring, makeWrapper, udev, curl, alsa-lib , libXfixes, atk, gtk3, libXrender, pango, gnome, cairo, freetype, fontconfig , libX11, libXi, libxcb, libXext, libXcursor, glib, libXScrnSaver, libxkbfile, libXtst , nss, nspr, cups, fetchzip, expat, gdk-pixbuf, libXdamage, libXrandr, dbus @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { nss nspr cups - alsaLib + alsa-lib expat gdk-pixbuf dbus diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/data.json b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/data.json index 40af0656fe..87b5273853 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/data.json +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/data.json @@ -1,13 +1,13 @@ { - "version": "13.12.2", - "repo_hash": "1wzbjw21pan5cfiz1jd03c3w9sgyvmn35f6dm2sr2k54acsw034p", + "version": "14.0.1", + "repo_hash": "185jzzlnghws958y15q7mzc7y42sxxq26p5i7j92bky9nkc1sa81", "owner": "gitlab-org", "repo": "gitlab", - "rev": "v13.12.2-ee", + "rev": "v14.0.1-ee", "passthru": { - "GITALY_SERVER_VERSION": "13.12.2", - "GITLAB_PAGES_VERSION": "1.39.0", - "GITLAB_SHELL_VERSION": "13.18.0", - "GITLAB_WORKHORSE_VERSION": "13.12.2" + "GITALY_SERVER_VERSION": "14.0.1", + "GITLAB_PAGES_VERSION": "1.40.0", + "GITLAB_SHELL_VERSION": "13.19.0", + "GITLAB_WORKHORSE_VERSION": "14.0.1" } } diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/default.nix index 0e6aaa5912..fffe889440 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/default.nix @@ -131,6 +131,7 @@ stdenv.mkDerivation { ${lib.optionalString (!gitlabEnterprise) '' # Remove all proprietary components rm -rf ee + sed -i 's/-ee//' ./VERSION ''} # For reasons I don't understand "bundle exec" ignores the @@ -181,6 +182,7 @@ stdenv.mkDerivation { GITLAB_PAGES_VERSION = data.passthru.GITLAB_PAGES_VERSION; GITLAB_SHELL_VERSION = data.passthru.GITLAB_SHELL_VERSION; GITLAB_WORKHORSE_VERSION = data.passthru.GITLAB_WORKHORSE_VERSION; + gitlabEnv.FOSS_ONLY = lib.boolToString (!gitlabEnterprise); tests = { nixos-test-passes = nixosTests.gitlab; }; @@ -189,7 +191,7 @@ stdenv.mkDerivation { meta = with lib; { homepage = "http://www.gitlab.com/"; platforms = platforms.linux; - maintainers = with maintainers; [ fpletz globin krav talyz ]; + maintainers = with maintainers; [ fpletz globin krav talyz yuka ]; } // (if gitlabEnterprise then { license = licenses.unfreeRedistributable; # https://gitlab.com/gitlab-org/gitlab-ee/raw/master/LICENSE diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/Gemfile b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/Gemfile index adee2020f6..20f1034fc9 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/Gemfile +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/Gemfile @@ -13,7 +13,7 @@ gem 'faraday', '~> 1.0' gem 'rbtrace', require: false # Labkit provides observability functionality -gem 'gitlab-labkit', '~> 0.16.2' +gem 'gitlab-labkit', '~> 0.17.1' # Detects the open source license the repository includes # This version needs to be in sync with GitLab CE/EE diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/Gemfile.lock b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/Gemfile.lock index a8e2f3f5a6..af6a3ce814 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/Gemfile.lock +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/Gemfile.lock @@ -65,13 +65,13 @@ GEM gitlab-gollum-rugged_adapter (0.4.4.4.gitlab.1) mime-types (>= 1.15) rugged (~> 1.0) - gitlab-labkit (0.16.2) + gitlab-labkit (0.17.1) actionpack (>= 5.0.0, < 7.0.0) activesupport (>= 5.0.0, < 7.0.0) grpc (~> 1.19) jaeger-client (~> 1.1) opentracing (~> 0.4) - pg_query (~> 1.3) + pg_query (~> 2.0) redis (> 3.0.0, < 5.0.0) gitlab-markup (1.7.1) google-protobuf (3.14.0) @@ -104,11 +104,11 @@ GEM mime-types-data (~> 3.2015) mime-types-data (3.2020.1104) mini_mime (1.0.2) - mini_portile2 (2.5.0) + mini_portile2 (2.5.1) minitest (5.14.2) msgpack (1.3.3) multipart-post (2.1.1) - nokogiri (1.11.1) + nokogiri (1.11.5) mini_portile2 (~> 2.5.0) racc (~> 1.4) nokogumbo (1.5.0) @@ -121,7 +121,8 @@ GEM parallel (1.19.2) parser (2.7.2.0) ast (~> 2.4.1) - pg_query (1.3.0) + pg_query (2.0.3) + google-protobuf (~> 3.15.5) proc_to_ast (0.1.0) coderay parser @@ -221,7 +222,7 @@ DEPENDENCIES github-linguist (~> 7.12) gitlab-gollum-lib (~> 4.2.7.10.gitlab.1) gitlab-gollum-rugged_adapter (~> 0.4.4.4.gitlab.1) - gitlab-labkit (~> 0.16.2) + gitlab-labkit (~> 0.17.1) gitlab-markup (~> 1.7.1) google-protobuf (~> 3.14.0) grpc (~> 1.30.2) diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/default.nix index 994683c2e2..4928fae80d 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/default.nix @@ -21,17 +21,17 @@ let }; }; in buildGoModule rec { - version = "13.12.2"; + version = "14.0.1"; pname = "gitaly"; src = fetchFromGitLab { owner = "gitlab-org"; repo = "gitaly"; rev = "v${version}"; - sha256 = "sha256-jZg/OlecYlGjDxlxsayAuqzptil1OPtyPjOe1WYT0HY="; + sha256 = "sha256-x9QTuEPLtiPJqk1UVwrlYvULIQ93TERSfslO2LB55cY="; }; - vendorSha256 = "sha256-drS0L0olEFHYJVC0VYwEZeNYa8fjwrfxlhrEQa4pqzY="; + vendorSha256 = "sha256-U962bMmXNnenCYkSdk0Uy7Bz+b9JGU5rJHfblZoyC/I="; passthru = { inherit rubyEnv; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/gemset.nix b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/gemset.nix index c3c742b666..91e5217c27 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/gemset.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitaly/gemset.nix @@ -269,10 +269,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0184rq6sal3xz4f0w5iaa5zf3q55i4dh0rlvr25l1g0s2imwr3fa"; + sha256 = "1y1sk3xmxj14nzx7v2zgq4q4d5lh4v1pvhs03n03j3kp4fbrj469"; type = "gem"; }; - version = "0.16.2"; + version = "0.17.1"; }; gitlab-markup = { groups = ["default"]; @@ -441,10 +441,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1hdbpmamx8js53yk3h8cqy12kgv6ca06k0c9n3pxh6b6cjfs19x7"; + sha256 = "0xg1x4708a4pn2wk8qs2d8kfzzdyv9kjjachg2f1phsx62ap2rx2"; type = "gem"; }; - version = "2.5.0"; + version = "2.5.1"; }; minitest = { groups = ["default" "development" "test"]; @@ -482,10 +482,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1ajwkqr28hwqbyl1l3czx4a34c88acxywyqp8cjyy0zgsd6sbhj2"; + sha256 = "1i80ny61maqzqr1fq5wgpkijmh5j8abisrmhn16kv7mzmxqg5w0m"; type = "gem"; }; - version = "1.11.1"; + version = "1.11.5"; }; nokogumbo = { dependencies = ["nokogiri"]; @@ -549,14 +549,15 @@ version = "2.7.2.0"; }; pg_query = { + dependencies = ["google-protobuf"]; groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1i9l3y502ddm2lq3ajhxhqq17vs9hgxkxm443yw221ccibcfh6qf"; + sha256 = "1mii63kgppy2zil2qn54c94z93b6ama6x7gq6rbv4xxlfk8ncrag"; type = "gem"; }; - version = "1.3.0"; + version = "2.0.3"; }; proc_to_ast = { dependencies = ["coderay" "parser" "unparser"]; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitlab-shell/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitlab-shell/default.nix index bdbde4dbde..704d908033 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitlab-shell/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitlab-shell/default.nix @@ -2,19 +2,19 @@ buildGoModule rec { pname = "gitlab-shell"; - version = "13.18.0"; + version = "13.19.0"; src = fetchFromGitLab { owner = "gitlab-org"; repo = "gitlab-shell"; rev = "v${version}"; - sha256 = "sha256-TPe2quDg/ljI2v1HciDajosSPm4Z/iT2skeveNdrKdo="; + sha256 = "sha256-CmatKArkpDS3GGbIIkKjs4FwywLiU+lRL32GKEpOqZ0="; }; buildInputs = [ ruby ]; patches = [ ./remove-hardcoded-locations.patch ]; - vendorSha256 = "sha256-MvWpZ/Z9ieNE0+p975BG302BPzFbCZD3cACXMW5fiTQ="; + vendorSha256 = "sha256-+nUMxHWo/d/WrQ4LAEG2+ghtNBF9vcnSyg6Ki412rPA="; postInstall = '' cp -r "$NIX_BUILD_TOP/source"/bin/* $out/bin diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitlab-workhorse/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitlab-workhorse/default.nix index c6302be8d1..e9058778ce 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitlab-workhorse/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/gitlab-workhorse/default.nix @@ -5,7 +5,7 @@ in buildGoModule rec { pname = "gitlab-workhorse"; - version = "13.12.2"; + version = "14.0.1"; src = fetchFromGitLab { owner = data.owner; @@ -16,7 +16,7 @@ buildGoModule rec { sourceRoot = "source/workhorse"; - vendorSha256 = "sha256-JJN1KqqbP4fIW/k6LebIaWdYOmIzHqxCDgOKrkbB7Nw="; + vendorSha256 = "sha256-gTObI0pmRUX6Eh5FVdt+5LbckyBuFq1Ly4oPZztazHQ="; buildInputs = [ git ]; buildFlagsArray = "-ldflags=-X main.Version=${version}"; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile index bb95233c6e..c7ae514f63 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile @@ -2,7 +2,7 @@ source 'https://rubygems.org' -gem 'rails', '~> 6.0.3.6' +gem 'rails', '~> 6.1.3.2' gem 'bootsnap', '~> 1.4.6' @@ -129,7 +129,7 @@ gem 'fog-local', '~> 0.6' gem 'fog-openstack', '~> 1.0' gem 'fog-rackspace', '~> 0.1.1' gem 'fog-aliyun', '~> 0.3' -gem 'gitlab-fog-azure-rm', '~> 1.0.1', require: false +gem 'gitlab-fog-azure-rm', '~> 1.1.1', require: false # for Google storage gem 'google-api-client', '~> 0.33' @@ -183,13 +183,8 @@ gem 'rack', '~> 2.2.3' # https://github.com/sharpstone/rack-timeout/blob/master/README.md#rails-apps-manually gem 'rack-timeout', '~> 0.5.1', require: 'rack/timeout/base' -group :unicorn do - gem 'unicorn', '~> 5.5' - gem 'unicorn-worker-killer', '~> 0.4.4' -end - group :puma do - gem 'puma', '~> 5.1.1', require: false + gem 'puma', '~> 5.3.1', require: false gem 'puma_worker_killer', '~> 0.3.1', require: false end @@ -254,7 +249,7 @@ gem 'flowdock', '~> 0.7' gem 'slack-messenger', '~> 2.3.4' # Hangouts Chat integration -gem 'hangouts-chat', '~> 0.0.5' +gem 'hangouts-chat', '~> 0.0.5', require: 'hangouts_chat' # Asana integration gem 'asana', '~> 0.10.3' @@ -306,15 +301,20 @@ gem 'gitlab-license', '~> 1.5' gem 'rack-attack', '~> 6.3.0' # Sentry integration -gem 'sentry-raven', '~> 3.0' +gem 'sentry-raven', '~> 3.1' # PostgreSQL query parsing -gem 'pg_query', '~> 2.0.3' +# +# We need this fork until https://github.com/pganalyze/pg_query/pull/212 +# and https://github.com/pganalyze/pg_query/pull/213 are +# released. gitlab-labkit will need to be updated to use the pg_query +# version. +gem 'gitlab-pg_query', '~> 2.0.4', require: 'pg_query' gem 'premailer-rails', '~> 1.10.3' # LabKit: Tracing and Correlation -gem 'gitlab-labkit', '~> 0.17.1' +gem 'gitlab-labkit', '~> 0.18.0' # Thrift is a dependency of gitlab-labkit, we want a version higher than 0.14.0 # because of https://gitlab.com/gitlab-org/gitlab/-/issues/321900 gem 'thrift', '>= 0.14.0' @@ -341,12 +341,11 @@ group :metrics do # Prometheus gem 'prometheus-client-mmap', '~> 0.12.0' - gem 'raindrops', '~> 0.18' end group :development do gem 'lefthook', '~> 0.7.0', require: false - gem 'solargraph', '~> 0.40.4', require: false + gem 'solargraph', '~> 0.42', require: false gem 'letter_opener_web', '~> 1.4.0' @@ -403,7 +402,7 @@ group :development, :test do end group :development, :test, :danger do - gem 'gitlab-dangerfiles', '~> 2.0.0', require: false + gem 'gitlab-dangerfiles', '~> 2.1.2', require: false end group :development, :test, :coverage do @@ -481,18 +480,21 @@ end gem 'spamcheck', '~> 0.1.0' # Gitaly GRPC protocol definitions -gem 'gitaly', '~> 13.12.0.pre.rc1' +gem 'gitaly', '~> 14.0.0.pre.rc2' + +# KAS GRPC protocol definitions +gem 'kas-grpc', '~> 0.0.2' gem 'grpc', '~> 1.30.2' -gem 'google-protobuf', '~> 3.15.8' +gem 'google-protobuf', '~> 3.17.1' gem 'toml-rb', '~> 1.0.0' # Feature toggles -gem 'flipper', '~> 0.17.1' -gem 'flipper-active_record', '~> 0.17.1' -gem 'flipper-active_support_cache_store', '~> 0.17.1' +gem 'flipper', '~> 0.21.0' +gem 'flipper-active_record', '~> 0.21.0' +gem 'flipper-active_support_cache_store', '~> 0.21.0' gem 'unleash', '~> 0.1.5' gem 'gitlab-experiment', '~> 0.5.4' diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile.lock b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile.lock index 6f40a15a64..bbdd48e437 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile.lock +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile.lock @@ -5,64 +5,68 @@ GEM abstract_type (0.0.7) acme-client (2.0.6) faraday (>= 0.17, < 2.0.0) - actioncable (6.0.3.6) - actionpack (= 6.0.3.6) + actioncable (6.1.3.2) + actionpack (= 6.1.3.2) + activesupport (= 6.1.3.2) nio4r (~> 2.0) websocket-driver (>= 0.6.1) - actionmailbox (6.0.3.6) - actionpack (= 6.0.3.6) - activejob (= 6.0.3.6) - activerecord (= 6.0.3.6) - activestorage (= 6.0.3.6) - activesupport (= 6.0.3.6) + actionmailbox (6.1.3.2) + actionpack (= 6.1.3.2) + activejob (= 6.1.3.2) + activerecord (= 6.1.3.2) + activestorage (= 6.1.3.2) + activesupport (= 6.1.3.2) mail (>= 2.7.1) - actionmailer (6.0.3.6) - actionpack (= 6.0.3.6) - actionview (= 6.0.3.6) - activejob (= 6.0.3.6) + actionmailer (6.1.3.2) + actionpack (= 6.1.3.2) + actionview (= 6.1.3.2) + activejob (= 6.1.3.2) + activesupport (= 6.1.3.2) mail (~> 2.5, >= 2.5.4) rails-dom-testing (~> 2.0) - actionpack (6.0.3.6) - actionview (= 6.0.3.6) - activesupport (= 6.0.3.6) - rack (~> 2.0, >= 2.0.8) + actionpack (6.1.3.2) + actionview (= 6.1.3.2) + activesupport (= 6.1.3.2) + rack (~> 2.0, >= 2.0.9) rack-test (>= 0.6.3) rails-dom-testing (~> 2.0) rails-html-sanitizer (~> 1.0, >= 1.2.0) - actiontext (6.0.3.6) - actionpack (= 6.0.3.6) - activerecord (= 6.0.3.6) - activestorage (= 6.0.3.6) - activesupport (= 6.0.3.6) + actiontext (6.1.3.2) + actionpack (= 6.1.3.2) + activerecord (= 6.1.3.2) + activestorage (= 6.1.3.2) + activesupport (= 6.1.3.2) nokogiri (>= 1.8.5) - actionview (6.0.3.6) - activesupport (= 6.0.3.6) + actionview (6.1.3.2) + activesupport (= 6.1.3.2) builder (~> 3.1) erubi (~> 1.4) rails-dom-testing (~> 2.0) rails-html-sanitizer (~> 1.1, >= 1.2.0) - activejob (6.0.3.6) - activesupport (= 6.0.3.6) + activejob (6.1.3.2) + activesupport (= 6.1.3.2) globalid (>= 0.3.6) - activemodel (6.0.3.6) - activesupport (= 6.0.3.6) - activerecord (6.0.3.6) - activemodel (= 6.0.3.6) - activesupport (= 6.0.3.6) + activemodel (6.1.3.2) + activesupport (= 6.1.3.2) + activerecord (6.1.3.2) + activemodel (= 6.1.3.2) + activesupport (= 6.1.3.2) activerecord-explain-analyze (0.1.0) activerecord (>= 4) pg - activestorage (6.0.3.6) - actionpack (= 6.0.3.6) - activejob (= 6.0.3.6) - activerecord (= 6.0.3.6) + activestorage (6.1.3.2) + actionpack (= 6.1.3.2) + activejob (= 6.1.3.2) + activerecord (= 6.1.3.2) + activesupport (= 6.1.3.2) marcel (~> 1.0.0) - activesupport (6.0.3.6) + mini_mime (~> 1.0.2) + activesupport (6.1.3.2) concurrent-ruby (~> 1.0, >= 1.0.2) - i18n (>= 0.7, < 2) - minitest (~> 5.1) - tzinfo (~> 1.1) - zeitwerk (~> 2.2, >= 2.2.2) + i18n (>= 1.6, < 2) + minitest (>= 5.1) + tzinfo (~> 2.0) + zeitwerk (~> 2.3) acts-as-taggable-on (7.0.0) activerecord (>= 5.0, < 6.2) adamantium (0.2.0) @@ -126,7 +130,7 @@ GEM net-http-persistent (~> 4.0) nokogiri (~> 1.11.0.rc2) babosa (1.0.4) - backport (1.1.2) + backport (1.2.0) base32 (0.3.2) batch-loader (2.0.1) bcrypt (3.1.16) @@ -341,13 +345,24 @@ GEM factory_bot_rails (6.1.0) factory_bot (~> 6.1.0) railties (>= 5.0.0) - faraday (1.0.1) + faraday (1.4.2) + faraday-em_http (~> 1.0) + faraday-em_synchrony (~> 1.0) + faraday-excon (~> 1.1) + faraday-net_http (~> 1.0) + faraday-net_http_persistent (~> 1.1) multipart-post (>= 1.2, < 3) + ruby2_keywords (>= 0.0.4) faraday-cookie_jar (0.0.7) faraday (>= 0.8.0) http-cookie (~> 1.0.0) + faraday-em_http (1.0.0) + faraday-em_synchrony (1.0.0) + faraday-excon (1.1.0) faraday-http-cache (2.2.0) faraday (>= 0.8) + faraday-net_http (1.0.1) + faraday-net_http_persistent (1.1.0) faraday_middleware (1.0.0) faraday (~> 1.0) faraday_middleware-aws-sigv4 (0.3.0) @@ -359,19 +374,19 @@ GEM fast_blank (1.0.0) fast_gettext (1.6.0) ffaker (2.10.0) - ffi (1.13.1) + ffi (1.15.1) ffi-compiler (1.0.1) ffi (>= 1.0.0) rake ffi-yajl (2.3.4) libyajl2 (~> 1.2) - flipper (0.17.1) - flipper-active_record (0.17.1) - activerecord (>= 4.2, < 7) - flipper (~> 0.17.1) - flipper-active_support_cache_store (0.17.1) - activesupport (>= 4.2, < 7) - flipper (~> 0.17.1) + flipper (0.21.0) + flipper-active_record (0.21.0) + activerecord (>= 5.0, < 7) + flipper (~> 0.21.0) + flipper-active_support_cache_store (0.21.0) + activesupport (>= 5.0, < 7) + flipper (~> 0.21.0) flowdock (0.7.1) httparty (~> 0.7) multi_json @@ -432,7 +447,7 @@ GEM rails (>= 3.2.0) git (1.7.0) rchardet (~> 1.8) - gitaly (13.12.0.pre.rc1) + gitaly (14.0.0.pre.rc2) grpc (~> 1.0) github-markup (1.7.0) gitlab (4.16.1) @@ -440,13 +455,13 @@ GEM terminal-table (~> 1.5, >= 1.5.1) gitlab-chronic (0.10.5) numerizer (~> 0.2) - gitlab-dangerfiles (2.0.0) + gitlab-dangerfiles (2.1.2) danger-gitlab gitlab-experiment (0.5.4) activesupport (>= 3.0) request_store (>= 1.0) scientist (~> 1.6, >= 1.6.0) - gitlab-fog-azure-rm (1.0.1) + gitlab-fog-azure-rm (1.1.1) azure-storage-blob (~> 2.0) azure-storage-common (~> 2.0) fog-core (= 2.1.0) @@ -460,13 +475,13 @@ GEM fog-xml (~> 0.1.0) google-api-client (>= 0.44.2, < 0.51) google-cloud-env (~> 1.2) - gitlab-labkit (0.17.1) + gitlab-labkit (0.18.0) actionpack (>= 5.0.0, < 7.0.0) activesupport (>= 5.0.0, < 7.0.0) + gitlab-pg_query (~> 2.0) grpc (~> 1.19) jaeger-client (~> 1.1) opentracing (~> 0.4) - pg_query (~> 2.0) redis (> 3.0.0, < 5.0.0) gitlab-license (1.5.0) gitlab-mail_room (0.0.9) @@ -476,6 +491,8 @@ GEM addressable (~> 2.7) omniauth (~> 1.9) openid_connect (~> 1.2) + gitlab-pg_query (2.0.4) + google-protobuf (>= 3.17.1) gitlab-sidekiq-fetcher (0.5.6) sidekiq (~> 5) gitlab-styles (6.2.0) @@ -509,7 +526,7 @@ GEM signet (~> 0.12) google-cloud-env (1.4.0) faraday (>= 0.17.3, < 2.0) - google-protobuf (3.15.8) + google-protobuf (3.17.1) googleapis-common-protos-types (1.0.6) google-protobuf (~> 3.14) googleauth (0.14.0) @@ -615,7 +632,7 @@ GEM http-cookie (1.0.3) domain_name (~> 0.5) http-form_data (2.3.0) - http-parser (1.2.1) + http-parser (1.2.3) ffi-compiler (>= 1.0, < 2.0) httparty (0.16.4) mime-types (~> 3.0) @@ -669,7 +686,8 @@ GEM activerecord kaminari-core (= 1.2.1) kaminari-core (1.2.1) - kgio (2.11.3) + kas-grpc (0.0.2) + grpc (~> 1.0) knapsack (1.21.1) rake kramdown (2.3.1) @@ -683,7 +701,7 @@ GEM rest-client (~> 2.0) launchy (2.5.0) addressable (~> 2.7) - lefthook (0.7.2) + lefthook (0.7.5) letter_opener (1.7.0) launchy (~> 2.2) letter_opener_web (1.4.0) @@ -735,7 +753,7 @@ GEM mime-types-data (3.2020.0512) mini_histogram (0.3.1) mini_magick (4.10.1) - mini_mime (1.1.0) + mini_mime (1.0.2) mini_portile2 (2.5.0) minitest (5.11.3) mixlib-cli (2.1.8) @@ -896,8 +914,6 @@ GEM peek (1.1.0) railties (>= 4.0.0) pg (1.2.3) - pg_query (2.0.3) - google-protobuf (~> 3.15.5) plist (3.6.0) png_quantizator (0.2.1) po_to_json (1.0.1) @@ -923,12 +939,12 @@ GEM pry (~> 0.13.0) pry-rails (0.3.9) pry (>= 0.10.4) - pry-shell (0.4.0) + pry-shell (0.4.1) pry (~> 0.13.0) tty-markdown tty-prompt public_suffix (4.0.6) - puma (5.1.1) + puma (5.3.2) nio4r (~> 2.0) puma_worker_killer (0.3.1) get_process_mem (~> 0.2) @@ -956,20 +972,20 @@ GEM rack-test (1.1.0) rack (>= 1.0, < 3) rack-timeout (0.5.2) - rails (6.0.3.6) - actioncable (= 6.0.3.6) - actionmailbox (= 6.0.3.6) - actionmailer (= 6.0.3.6) - actionpack (= 6.0.3.6) - actiontext (= 6.0.3.6) - actionview (= 6.0.3.6) - activejob (= 6.0.3.6) - activemodel (= 6.0.3.6) - activerecord (= 6.0.3.6) - activestorage (= 6.0.3.6) - activesupport (= 6.0.3.6) - bundler (>= 1.3.0) - railties (= 6.0.3.6) + rails (6.1.3.2) + actioncable (= 6.1.3.2) + actionmailbox (= 6.1.3.2) + actionmailer (= 6.1.3.2) + actionpack (= 6.1.3.2) + actiontext (= 6.1.3.2) + actionview (= 6.1.3.2) + activejob (= 6.1.3.2) + activemodel (= 6.1.3.2) + activerecord (= 6.1.3.2) + activestorage (= 6.1.3.2) + activesupport (= 6.1.3.2) + bundler (>= 1.15.0) + railties (= 6.1.3.2) sprockets-rails (>= 2.0.0) rails-controller-testing (1.0.5) actionpack (>= 5.0.1.rc1) @@ -983,14 +999,13 @@ GEM rails-i18n (6.0.0) i18n (>= 0.7, < 2) railties (>= 6.0.0, < 7) - railties (6.0.3.6) - actionpack (= 6.0.3.6) - activesupport (= 6.0.3.6) + railties (6.1.3.2) + actionpack (= 6.1.3.2) + activesupport (= 6.1.3.2) method_source rake (>= 0.8.7) - thor (>= 0.20.3, < 2.0) + thor (~> 1.0) rainbow (3.0.0) - raindrops (0.19.1) rake (13.0.3) rb-fsevent (0.10.4) rb-inotify (0.10.1) @@ -1124,7 +1139,7 @@ GEM nokogiri (>= 1.10.5) rexml ruby-statistics (2.1.2) - ruby2_keywords (0.0.2) + ruby2_keywords (0.0.4) ruby_parser (3.15.0) sexp_processor (~> 4.9) rubyntlm (0.6.2) @@ -1163,7 +1178,7 @@ GEM selenium-webdriver (3.142.7) childprocess (>= 0.5, < 4.0) rubyzip (>= 1.2.2) - sentry-raven (3.0.4) + sentry-raven (3.1.2) faraday (>= 1.0) settingslogic (2.0.9) sexp_processor (4.15.1) @@ -1194,10 +1209,11 @@ GEM slack-messenger (2.3.4) snowplow-tracker (0.6.1) contracts (~> 0.7, <= 0.11) - solargraph (0.40.4) - backport (~> 1.1) + solargraph (0.42.3) + backport (~> 1.2) benchmark bundler (>= 1.17.2) + diff-lcs (~> 1.4) e2mmap jaro_winkler (~> 1.5) kramdown (~> 2.3) @@ -1249,8 +1265,8 @@ GEM terser (1.0.2) execjs (>= 0.3.0, < 3) test-prof (0.12.0) - test_file_finder (0.1.3) - faraday (~> 1.0.1) + test_file_finder (0.1.4) + faraday (~> 1.0) text (1.3.1) thin (1.8.0) daemons (~> 1.0, >= 1.0.9) @@ -1299,8 +1315,8 @@ GEM tty-screen (~> 0.8) wisper (~> 2.0) tty-screen (0.8.1) - tzinfo (1.2.9) - thread_safe (~> 0.1) + tzinfo (2.0.4) + concurrent-ruby (~> 1.0) u2f (0.2.1) uber (0.1.0) unf (0.1.4) @@ -1308,12 +1324,6 @@ GEM unf_ext (0.0.7.7) unicode-display_width (1.7.0) unicode_utils (1.4.0) - unicorn (5.5.5) - kgio (~> 2.6) - raindrops (~> 0.7) - unicorn-worker-killer (0.4.4) - get_process_mem (~> 0) - unicorn (>= 4, < 6) uniform_notifier (1.13.0) unleash (0.1.5) murmurhash3 (~> 0.1.6) @@ -1450,9 +1460,9 @@ DEPENDENCIES faraday_middleware-aws-sigv4 (~> 0.3.0) fast_blank ffaker (~> 2.10) - flipper (~> 0.17.1) - flipper-active_record (~> 0.17.1) - flipper-active_support_cache_store (~> 0.17.1) + flipper (~> 0.21.0) + flipper-active_record (~> 0.21.0) + flipper-active_support_cache_store (~> 0.21.0) flowdock (~> 0.7) fog-aliyun (~> 0.3) fog-aws (~> 3.9) @@ -1466,26 +1476,27 @@ DEPENDENCIES gettext (~> 3.3) gettext_i18n_rails (~> 1.8.0) gettext_i18n_rails_js (~> 1.3) - gitaly (~> 13.12.0.pre.rc1) + gitaly (~> 14.0.0.pre.rc2) github-markup (~> 1.7.0) gitlab-chronic (~> 0.10.5) - gitlab-dangerfiles (~> 2.0.0) + gitlab-dangerfiles (~> 2.1.2) gitlab-experiment (~> 0.5.4) - gitlab-fog-azure-rm (~> 1.0.1) + gitlab-fog-azure-rm (~> 1.1.1) gitlab-fog-google (~> 1.13) - gitlab-labkit (~> 0.17.1) + gitlab-labkit (~> 0.18.0) gitlab-license (~> 1.5) gitlab-mail_room (~> 0.0.9) gitlab-markup (~> 1.7.1) gitlab-net-dns (~> 0.9.1) gitlab-omniauth-openid-connect (~> 0.4.0) + gitlab-pg_query (~> 2.0.4) gitlab-sidekiq-fetcher (= 0.5.6) gitlab-styles (~> 6.2.0) gitlab_chronic_duration (~> 0.10.6.2) gitlab_omniauth-ldap (~> 2.1.1) gon (~> 6.4.0) google-api-client (~> 0.33) - google-protobuf (~> 3.15.8) + google-protobuf (~> 3.17.1) gpgme (~> 2.0.19) grape (~> 1.5.2) grape-entity (~> 0.9.0) @@ -1516,6 +1527,7 @@ DEPENDENCIES json_schemer (~> 0.2.12) jwt (~> 2.1.0) kaminari (~> 1.0) + kas-grpc (~> 0.0.2) knapsack (~> 1.21.1) kramdown (~> 2.3.1) kubeclient (~> 4.9.1) @@ -1565,14 +1577,13 @@ DEPENDENCIES parslet (~> 1.8) peek (~> 1.1) pg (~> 1.1) - pg_query (~> 2.0.3) png_quantizator (~> 0.2.1) premailer-rails (~> 1.10.3) prometheus-client-mmap (~> 0.12.0) pry-byebug pry-rails (~> 0.3.9) pry-shell (~> 0.4.0) - puma (~> 5.1.1) + puma (~> 5.3.1) puma_worker_killer (~> 0.3.1) rack (~> 2.2.3) rack-attack (~> 6.3.0) @@ -1580,11 +1591,10 @@ DEPENDENCIES rack-oauth2 (~> 1.16.0) rack-proxy (~> 0.6.0) rack-timeout (~> 0.5.1) - rails (~> 6.0.3.6) + rails (~> 6.1.3.2) rails-controller-testing rails-i18n (~> 6.0) rainbow (~> 3.0) - raindrops (~> 0.18) rblineprof (~> 0.3.6) rbtrace (~> 0.4) rdoc (~> 6.1.2) @@ -1616,7 +1626,7 @@ DEPENDENCIES sassc-rails (~> 2.1.0) seed-fu (~> 2.3.7) selenium-webdriver (~> 3.142) - sentry-raven (~> 3.0) + sentry-raven (~> 3.1) settingslogic (~> 2.0.9) shoulda-matchers (~> 4.0.1) sidekiq (~> 5.2.7) @@ -1626,7 +1636,7 @@ DEPENDENCIES simplecov-cobertura (~> 1.3.1) slack-messenger (~> 2.3.4) snowplow-tracker (~> 0.6.1) - solargraph (~> 0.40.4) + solargraph (~> 0.42) spamcheck (~> 0.1.0) spring (~> 2.1.0) spring-commands-rspec (~> 1.0.4) @@ -1645,8 +1655,6 @@ DEPENDENCIES truncato (~> 0.7.11) u2f (~> 0.2.1) unf (~> 0.1.4) - unicorn (~> 5.5) - unicorn-worker-killer (~> 0.4.4) unleash (~> 0.1.5) valid_email (~> 0.1) validates_hostname (~> 1.0.11) diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/gemset.nix b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/gemset.nix index 9500febc85..4814a6f2a1 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/gemset.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/rubyEnv/gemset.nix @@ -21,15 +21,15 @@ version = "2.0.6"; }; actioncable = { - dependencies = ["actionpack" "nio4r" "websocket-driver"]; + dependencies = ["actionpack" "activesupport" "nio4r" "websocket-driver"]; groups = ["default" "test"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1543p34bfq7s4l83m0f84f0z5yr1ip1miyimv4gh2k136pgk23r9"; + sha256 = "15r6ab17iwhhq92by4ah9z4wwvjbr07qn16x8pn2ypgqwvfy74h7"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; actionmailbox = { dependencies = ["actionpack" "activejob" "activerecord" "activestorage" "activesupport" "mail"]; @@ -37,21 +37,21 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0dnx7mhhzwr45lsxkd7y9ld9vazcadxzs7813jp19hk3wra4jvs3"; + sha256 = "1q1r3x9fbq5wlgn4xhqw48la09q7f97zna7ld5fglk3jpmh973x5"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; actionmailer = { - dependencies = ["actionpack" "actionview" "activejob" "mail" "rails-dom-testing"]; + dependencies = ["actionpack" "actionview" "activejob" "activesupport" "mail" "rails-dom-testing"]; groups = ["default" "development" "test"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1cnsv97qx7708wg00lxcl7a6h8amxn85h40s8ngszhknh8wpwj3f"; + sha256 = "1nqdaykzgib8fsldkxdkw0w44jzz4grvb028crzg0qpwvv03g2wp"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; actionpack = { dependencies = ["actionview" "activesupport" "rack" "rack-test" "rails-dom-testing" "rails-html-sanitizer"]; @@ -59,10 +59,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "10rn7gmnnwpm593xv6lcf4qa72wmlbyjg4zmdc3lpb5596whd3yz"; + sha256 = "1wdgv5llgbl4nayx5j78lfvhhjssrzfmypb45mjy37mgm8z5l5m5"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; actiontext = { dependencies = ["actionpack" "activerecord" "activestorage" "activesupport" "nokogiri"]; @@ -70,10 +70,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "13i7x4zp991sq3zsagpzs01bhm81zgy63lamqrpsp68nv584n5sx"; + sha256 = "1zfrkcnp9wy1dm4b6iqf29858dp04a62asfmldainqmv4a7931q7"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; actionview = { dependencies = ["activesupport" "builder" "erubi" "rails-dom-testing" "rails-html-sanitizer"]; @@ -81,10 +81,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0ikqpxsrsb7xmq6ds5iq22nj2j3ai16z8z2j5r6lk8pzbi0wwsz5"; + sha256 = "1r6db2g3fsrca1hp9kbyvjx9psipsxw0g306qharkcblxl8h1ysn"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; activejob = { dependencies = ["activesupport" "globalid"]; @@ -92,10 +92,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1sy9kyl7famlwrdw7gz6sy7azhkcsn1mjja44s44libcz3fl7jpc"; + sha256 = "0p80rbahcxhxlkxgf4bh580hbifn9q4gr5g9fy8fd0z5g6gr9xxq"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; activemodel = { dependencies = ["activesupport"]; @@ -103,10 +103,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "15kq8ghmkav331dz1pak1bc8q1v5xajw6pkj20hqr8m5zl6czcld"; + sha256 = "1gpd3hh4ryyr84drj6m0b5sy6929nyf50bfgksw1hpc594542nal"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; activerecord = { dependencies = ["activemodel" "activesupport"]; @@ -114,10 +114,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1a3hc2rammy4mfrjwzc9rsn497yq9xc0x89c00niiq45q3qs44vz"; + sha256 = "0fg58qma2zgrz0gr61p61qcz8c3h88fd5lbdrkpkm96aq5shwh68"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; activerecord-explain-analyze = { dependencies = ["activerecord" "pg"]; @@ -131,15 +131,15 @@ version = "0.1.0"; }; activestorage = { - dependencies = ["actionpack" "activejob" "activerecord" "marcel"]; + dependencies = ["actionpack" "activejob" "activerecord" "activesupport" "marcel" "mini_mime"]; groups = ["default" "test"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1jwdfqn01g7v7ssrrf2q2pvc8k6rdqccp26qkyfxiraaz9d1la62"; + sha256 = "0sbpkk3r8qi47bd0ilznq4gpfyfwm2bwvxqb5z0wc75h3zj1jhqg"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; activesupport = { dependencies = ["concurrent-ruby" "i18n" "minitest" "tzinfo" "zeitwerk"]; @@ -147,10 +147,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0sls37x9pd2zmipn14c46gcjbfzlg269r413cvm0d58595qkiv7z"; + sha256 = "1csxddyhl6k773ycxjvmyshyr4g9jb1icbs3pnm7crnavqs4h1yr"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; acts-as-taggable-on = { dependencies = ["activerecord"]; @@ -465,10 +465,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1xmjljpyx5ly078gi0lmmgkv4y0msxxa3hmv74bzxzp3l8qbn5vc"; + sha256 = "0xbzzjrgah0f8ifgd449kak2vyf30micpz6x2g82aipfv7ypsb4i"; type = "gem"; }; - version = "1.1.2"; + version = "1.2.0"; }; base32 = { groups = ["default"]; @@ -1509,15 +1509,15 @@ version = "6.1.0"; }; faraday = { - dependencies = ["multipart-post"]; - groups = ["default" "development"]; + dependencies = ["faraday-em_http" "faraday-em_synchrony" "faraday-excon" "faraday-net_http" "faraday-net_http_persistent" "multipart-post" "ruby2_keywords"]; + groups = ["danger" "default" "development" "test"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0wwks9652xwgjm7yszcq5xr960pjypc07ivwzbjzpvy9zh2fw6iq"; + sha256 = "07mhk70gv453pg38md346470hknyhipdqppnplq706ll3k3lzb7v"; type = "gem"; }; - version = "1.0.1"; + version = "1.4.2"; }; faraday-cookie_jar = { dependencies = ["faraday" "http-cookie"]; @@ -1530,6 +1530,36 @@ }; version = "0.0.7"; }; + faraday-em_http = { + groups = ["danger" "default" "development" "test"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "12cnqpbak4vhikrh2cdn94assh3yxza8rq2p9w2j34bqg5q4qgbs"; + type = "gem"; + }; + version = "1.0.0"; + }; + faraday-em_synchrony = { + groups = ["danger" "default" "development" "test"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1vgrbhkp83sngv6k4mii9f2s9v5lmp693hylfxp2ssfc60fas3a6"; + type = "gem"; + }; + version = "1.0.0"; + }; + faraday-excon = { + groups = ["danger" "default" "development" "test"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0h09wkb0k0bhm6dqsd47ac601qiaah8qdzjh8gvxfd376x1chmdh"; + type = "gem"; + }; + version = "1.1.0"; + }; faraday-http-cache = { dependencies = ["faraday"]; groups = ["default" "development"]; @@ -1541,6 +1571,26 @@ }; version = "2.2.0"; }; + faraday-net_http = { + groups = ["danger" "default" "development" "test"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1fi8sda5hc54v1w3mqfl5yz09nhx35kglyx72w7b8xxvdr0cwi9j"; + type = "gem"; + }; + version = "1.0.1"; + }; + faraday-net_http_persistent = { + groups = ["danger" "default" "development" "test"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0l2c835wl7gv34xp49fhd1bl4czkpw2g3ahqsak2251iqv5589ka"; + type = "gem"; + }; + version = "1.1.0"; + }; faraday_middleware = { dependencies = ["faraday"]; groups = ["default"]; @@ -1605,14 +1655,14 @@ version = "2.10.0"; }; ffi = { - groups = ["default" "development" "kerberos" "puma" "test" "unicorn"]; + groups = ["default" "development" "kerberos" "puma" "test"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "12lpwaw82bb0rm9f52v1498bpba8aj2l2q359mkwbxsswhpga5af"; + sha256 = "15nn2v70rql15vb0pm9cg0f3xsaslwjkv6xgz0k5jh48idmfw9fi"; type = "gem"; }; - version = "1.13.1"; + version = "1.15.1"; }; ffi-compiler = { dependencies = ["ffi" "rake"]; @@ -1641,10 +1691,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "01gbn1qmcvn49gjcbvd5fga57qc8l3915kb04ikkffvb6n09q7f7"; + sha256 = "00qjmmy4lx6cbyndpqgj330ys6pxi3chhqfaybd5c7m9y0kr6ck9"; type = "gem"; }; - version = "0.17.1"; + version = "0.21.0"; }; flipper-active_record = { dependencies = ["activerecord" "flipper"]; @@ -1652,10 +1702,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "154q9xajqs64gxa9fv4hwpad44x3rmwgpldrb941i8wi37dpzskg"; + sha256 = "06j6fg8qdxklml0qvindy8dghx3ilq2k3x5rwdxlr8vjl5hljqm5"; type = "gem"; }; - version = "0.17.1"; + version = "0.21.0"; }; flipper-active_support_cache_store = { dependencies = ["activesupport" "flipper"]; @@ -1663,10 +1713,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0mkbyn3mx3f411x4z1l1djc9vix3wrfzd5rhrmxb83iqp60r42hg"; + sha256 = "00rb87d1f7wl1n3idv8bvjv45v3j1n1j5wm2vswisayv7z8wqp6r"; type = "gem"; }; - version = "0.17.1"; + version = "0.21.0"; }; flowdock = { dependencies = ["httparty" "multi_json"]; @@ -1891,10 +1941,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1l0zq04lhqbzg0grca1c0p3a5gb9jdlhy41dhlgnrsaf7k6xads6"; + sha256 = "1wpp1zdwjmglsycliag6v9844jnhpvkblry9i14a16gspqdsfam4"; type = "gem"; }; - version = "13.12.0.pre.rc1"; + version = "14.0.0.pre.rc2"; }; github-markup = { groups = ["default"]; @@ -1934,10 +1984,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0h40p9v034jczialkh4brrv7karrx6a95mhrfpfs17p800lighzz"; + sha256 = "09vcxzbsvgis47ifgd82rjn12587qcw6q2q0n0y3cg5snag6fqdb"; type = "gem"; }; - version = "2.0.0"; + version = "2.1.2"; }; gitlab-experiment = { dependencies = ["activesupport" "request_store" "scientist"]; @@ -1956,10 +2006,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "05yc5fp45v7y6h838zrj4666ar1ddhn8i5bbdxm8j73yrn2kjnal"; + sha256 = "1k5f3vyy2jqv3zdkdqal6sgn447zakz8xcc04432qd806s7g9i89"; type = "gem"; }; - version = "1.0.1"; + version = "1.1.1"; }; gitlab-fog-google = { dependencies = ["addressable" "fog-core" "fog-json" "fog-xml" "google-api-client" "google-cloud-env"]; @@ -1973,15 +2023,15 @@ version = "1.13.0"; }; gitlab-labkit = { - dependencies = ["actionpack" "activesupport" "grpc" "jaeger-client" "opentracing" "pg_query" "redis"]; + dependencies = ["actionpack" "activesupport" "gitlab-pg_query" "grpc" "jaeger-client" "opentracing" "redis"]; groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1y1sk3xmxj14nzx7v2zgq4q4d5lh4v1pvhs03n03j3kp4fbrj469"; + sha256 = "1d18fx54dq2a2ngdix3dchbk4xpxfpqz1rkr2hi1kvi6idq4k6qp"; type = "gem"; }; - version = "0.17.1"; + version = "0.18.0"; }; gitlab-license = { groups = ["default"]; @@ -2034,6 +2084,17 @@ }; version = "0.4.0"; }; + gitlab-pg_query = { + dependencies = ["google-protobuf"]; + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "17whjbrmyh1wn3badapa1xhdcjpdrxgn7vz705fpi1p9r8q0a2vj"; + type = "gem"; + }; + version = "2.0.4"; + }; gitlab-sidekiq-fetcher = { dependencies = ["sidekiq"]; groups = ["default"]; @@ -2127,10 +2188,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0d9ayd4c69iag9nny7yydjx6dw4ymd52x1kv917ngv3vmsdkv51x"; + sha256 = "00jm6b5gpzj99cngha3g70s0xnr0c58si7kx3g7jiaj9ipp26qj5"; type = "gem"; }; - version = "3.15.8"; + version = "3.17.1"; }; googleapis-common-protos-types = { dependencies = ["google-protobuf"]; @@ -2503,10 +2564,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "10wz818i7dq5zkcll0yf7pbjz1zqvs7mgh3xg3x6www2f2ccwxqj"; + sha256 = "18qqvckvqjffh88hfib6c8pl9qwk9gp89w89hl3f2s1x8hgyqka1"; type = "gem"; }; - version = "1.2.1"; + version = "1.2.3"; }; httparty = { dependencies = ["mime-types" "multi_xml"]; @@ -2740,15 +2801,16 @@ }; version = "1.2.1"; }; - kgio = { - groups = ["default" "unicorn"]; + kas-grpc = { + dependencies = ["grpc"]; + groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0ai6bzlvxbzpdl466p1qi4dlhx8ri2wcrp6x1l19y3yfs3a29rng"; + sha256 = "05lsvxb6mpx5h3zmp3pgs3cp52r1kb3a8yr9j7s3ksajb58zf7qi"; type = "gem"; }; - version = "2.11.3"; + version = "0.0.2"; }; knapsack = { dependencies = ["rake"]; @@ -2810,10 +2872,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "17bv6zfdzwbbh8n0iw8zgjngsvyp2imrrfshj62yrlxpka9ka0z3"; + sha256 = "07r76qlzxcz9y4dmkqf8k4khkfq7s2v22dcq6b0w0v4cfiwqva3h"; type = "gem"; }; - version = "0.7.2"; + version = "0.7.5"; }; letter_opener = { dependencies = ["launchy"]; @@ -3065,10 +3127,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0kb7jq3wjgckmkzna799y5qmvn6vg52878bkgw35qay6lflcrwih"; + sha256 = "1axm0rxyx3ss93wbmfkm78a6x03l8y4qy60rhkkiq0aza0vwq3ha"; type = "gem"; }; - version = "1.1.0"; + version = "1.0.2"; }; mini_portile2 = { groups = ["default" "development" "test"]; @@ -3810,17 +3872,6 @@ }; version = "1.2.3"; }; - pg_query = { - dependencies = ["google-protobuf"]; - groups = ["default"]; - platforms = []; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "1mii63kgppy2zil2qn54c94z93b6ama6x7gq6rbv4xxlfk8ncrag"; - type = "gem"; - }; - version = "2.0.3"; - }; plist = { groups = ["default"]; platforms = []; @@ -3948,10 +3999,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1315j8klxd404xxmcw1c6rlx7j445dzx62q5sggzvd59sl1amkf5"; + sha256 = "1wyx2rz58lfys1h62h6inz7ggq8xckqyfxndk8jq2cbkkdi2n6d7"; type = "gem"; }; - version = "0.4.0"; + version = "0.4.1"; }; public_suffix = { groups = ["default" "development" "test"]; @@ -3969,10 +4020,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "13640p5fk19705ygp8j6p07lccag3d80bx8bmjgpd5zsxxsdc50b"; + sha256 = "0lmaq05a257m9588a81wql3a5p039f221f0dmq57bm2qjwxydjmj"; type = "gem"; }; - version = "5.1.1"; + version = "5.3.2"; }; puma_worker_killer = { dependencies = ["get_process_mem" "puma"]; @@ -4118,10 +4169,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "01mwx4q9yz792dbi61j378iz6p7q63sxj3267jwwccjqmn6hf2kr"; + sha256 = "0flnpli87b9j0zvb3c4l5addjbznbpkbmp1wzfjc1gh8qxlhcs1n"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; rails-controller-testing = { dependencies = ["actionpack" "actionview" "activesupport"]; @@ -4173,10 +4224,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0i50vbscdk6wqxd2p0xwsyi07lwda612njqk8pn1f56snz5z0dcr"; + sha256 = "17r1pr8d467vh3zkciw4wmrcixj9zjrvd11nxn2z091bkzf66xq2"; type = "gem"; }; - version = "6.0.3.6"; + version = "6.1.3.2"; }; rainbow = { groups = ["default" "development" "test"]; @@ -4188,16 +4239,6 @@ }; version = "3.0.0"; }; - raindrops = { - groups = ["metrics" "unicorn"]; - platforms = []; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "0zjja00mzgx2lddb7qrn14k7qrnwhf4bpmnlqj78m1pfxh7svync"; - type = "gem"; - }; - version = "0.19.1"; - }; rake = { groups = ["default" "development" "test"]; platforms = []; @@ -4789,14 +4830,14 @@ version = "2.1.2"; }; ruby2_keywords = { - groups = ["default"]; + groups = ["danger" "default" "development" "test"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "17pcc0wgvh3ikrkr7bm3nx0qhyiqwidd13ij0fa50k7gsbnr2p0l"; + sha256 = "15wfcqxyfgka05v2a7kpg64x57gl1y4xzvnc9lh60bqx5sf1iqrs"; type = "gem"; }; - version = "0.0.2"; + version = "0.0.4"; }; ruby_parser = { dependencies = ["sexp_processor"]; @@ -4984,10 +5025,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "17j4br2lpnd8066d50mkg9kwk9v70hn3zfiqkvysd8p9nffmqnm0"; + sha256 = "0jin9x4f43lplglhr9smv2wxsjgmph2ygqlci4s0v0aq5493ng8h"; type = "gem"; }; - version = "3.0.4"; + version = "3.1.2"; }; settingslogic = { groups = ["default"]; @@ -5137,15 +5178,15 @@ version = "0.6.1"; }; solargraph = { - dependencies = ["backport" "benchmark" "e2mmap" "jaro_winkler" "kramdown" "kramdown-parser-gfm" "parser" "reverse_markdown" "rubocop" "thor" "tilt" "yard"]; + dependencies = ["backport" "benchmark" "diff-lcs" "e2mmap" "jaro_winkler" "kramdown" "kramdown-parser-gfm" "parser" "reverse_markdown" "rubocop" "thor" "tilt" "yard"]; groups = ["development"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0xrad7amwf3nmdbif566qprk6xvwydxwz0s7arnzpvr01anc9gcl"; + sha256 = "1xqmvwh6k638h6r13wsx1l0n0jvz07qys1lr7z8aaynscs0k6hyi"; type = "gem"; }; - version = "0.40.4"; + version = "0.42.3"; }; spamcheck = { dependencies = ["grpc"]; @@ -5374,10 +5415,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0mbhiz7g7nd3v1ai4cgwzp2zr34k1h5am0vn9bny5qqn1408rlgi"; + sha256 = "1kgak2xqyp2wf7y1c1q1dpxw56iq9mgpqjji6vfbjkxckqrxhdmw"; type = "gem"; }; - version = "0.1.3"; + version = "0.1.4"; }; text = { groups = ["default" "development"]; @@ -5609,15 +5650,15 @@ version = "0.8.1"; }; tzinfo = { - dependencies = ["thread_safe"]; + dependencies = ["concurrent-ruby"]; groups = ["default" "development" "test"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0zwqqh6138s8b321fwvfbywxy00lw1azw4ql3zr0xh1aqxf8cnvj"; + sha256 = "10qp5x7f9hvlc0psv9gsfbxg4a7s0485wsbq1kljkxq94in91l4z"; type = "gem"; }; - version = "1.2.9"; + version = "2.0.4"; }; u2f = { groups = ["default"]; @@ -5680,28 +5721,6 @@ }; version = "1.4.0"; }; - unicorn = { - dependencies = ["kgio" "raindrops"]; - groups = ["unicorn"]; - platforms = []; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "1cznkq0agsm7s66nbqbalmq5nlc5cdpd2h88r8jdzsc7wsi5a098"; - type = "gem"; - }; - version = "5.5.5"; - }; - unicorn-worker-killer = { - dependencies = ["get_process_mem" "unicorn"]; - groups = ["unicorn"]; - platforms = []; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "0rrdxpwdsapx47axjin8ymxb4f685qlpx8a26bql4ay1559c3gva"; - type = "gem"; - }; - version = "0.4.4"; - }; uniform_notifier = { groups = ["default" "development" "test"]; platforms = []; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/yarnPkgs.nix b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/yarnPkgs.nix index 12a350c26e..2af33d3184 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitlab/yarnPkgs.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitlab/yarnPkgs.nix @@ -778,11 +778,11 @@ }; } { - name = "_eslint_eslintrc___eslintrc_0.4.1.tgz"; + name = "_eslint_eslintrc___eslintrc_0.4.2.tgz"; path = fetchurl { - name = "_eslint_eslintrc___eslintrc_0.4.1.tgz"; - url = "https://registry.yarnpkg.com/@eslint/eslintrc/-/eslintrc-0.4.1.tgz"; - sha1 = "442763b88cecbe3ee0ec7ca6d6dd6168550cbf14"; + name = "_eslint_eslintrc___eslintrc_0.4.2.tgz"; + url = "https://registry.yarnpkg.com/@eslint/eslintrc/-/eslintrc-0.4.2.tgz"; + sha1 = "f63d0ef06f5c0c57d76c4ab5f63d3835c51b0179"; }; } { @@ -818,11 +818,11 @@ }; } { - name = "_gitlab_svgs___svgs_1.197.0.tgz"; + name = "_gitlab_svgs___svgs_1.199.0.tgz"; path = fetchurl { - name = "_gitlab_svgs___svgs_1.197.0.tgz"; - url = "https://registry.yarnpkg.com/@gitlab/svgs/-/svgs-1.197.0.tgz"; - sha1 = "70be3217b4c0c84b494615d0672734f40e3695d4"; + name = "_gitlab_svgs___svgs_1.199.0.tgz"; + url = "https://registry.yarnpkg.com/@gitlab/svgs/-/svgs-1.199.0.tgz"; + sha1 = "0512a854018defc4e286b8ecb2143958bb535146"; }; } { @@ -834,11 +834,11 @@ }; } { - name = "_gitlab_ui___ui_29.27.0.tgz"; + name = "_gitlab_ui___ui_29.35.0.tgz"; path = fetchurl { - name = "_gitlab_ui___ui_29.27.0.tgz"; - url = "https://registry.yarnpkg.com/@gitlab/ui/-/ui-29.27.0.tgz"; - sha1 = "c5cbe1fee2164705ea6a431c85f6fdaa2ff7e166"; + name = "_gitlab_ui___ui_29.35.0.tgz"; + url = "https://registry.yarnpkg.com/@gitlab/ui/-/ui-29.35.0.tgz"; + sha1 = "bb04d1e4f8796134bc406adaa869c1b5b1fdcaf2"; }; } { @@ -1002,11 +1002,11 @@ }; } { - name = "_nuxt_opencollective___opencollective_0.3.0.tgz"; + name = "_nuxt_opencollective___opencollective_0.3.2.tgz"; path = fetchurl { - name = "_nuxt_opencollective___opencollective_0.3.0.tgz"; - url = "https://registry.yarnpkg.com/@nuxt/opencollective/-/opencollective-0.3.0.tgz"; - sha1 = "11d8944dcf2d526e31660bb69570be03f8fb72b7"; + name = "_nuxt_opencollective___opencollective_0.3.2.tgz"; + url = "https://registry.yarnpkg.com/@nuxt/opencollective/-/opencollective-0.3.2.tgz"; + sha1 = "83cb70cdb2bac5fad6f8c93529e7b11187d49c02"; }; } { @@ -1026,67 +1026,67 @@ }; } { - name = "_rails_actioncable___actioncable_6.1.0.tgz"; + name = "_rails_actioncable___actioncable_6.1.3_2.tgz"; path = fetchurl { - name = "_rails_actioncable___actioncable_6.1.0.tgz"; - url = "https://registry.yarnpkg.com/@rails/actioncable/-/actioncable-6.1.0.tgz"; - sha1 = "f336f25450b1bc43b99bc60557a70b6e6bb1d3d2"; + name = "_rails_actioncable___actioncable_6.1.3_2.tgz"; + url = "https://registry.yarnpkg.com/@rails/actioncable/-/actioncable-6.1.3-2.tgz"; + sha1 = "de22e2d7474dcca051f7060829450412a17ecc04"; }; } { - name = "_rails_ujs___ujs_6.1.0.tgz"; + name = "_rails_ujs___ujs_6.1.3_2.tgz"; path = fetchurl { - name = "_rails_ujs___ujs_6.1.0.tgz"; - url = "https://registry.yarnpkg.com/@rails/ujs/-/ujs-6.1.0.tgz"; - sha1 = "9a48df6511cb2b472c9f596c1f37dc0af022e751"; + name = "_rails_ujs___ujs_6.1.3_2.tgz"; + url = "https://registry.yarnpkg.com/@rails/ujs/-/ujs-6.1.3-2.tgz"; + sha1 = "5d7e161e7061654e738a116a7ec8b58b51721a11"; }; } { - name = "_sentry_browser___browser_5.30.0.tgz"; + name = "_sentry_browser___browser_5.26.0.tgz"; path = fetchurl { - name = "_sentry_browser___browser_5.30.0.tgz"; - url = "https://registry.yarnpkg.com/@sentry/browser/-/browser-5.30.0.tgz"; - sha1 = "c28f49d551db3172080caef9f18791a7fd39e3b3"; + name = "_sentry_browser___browser_5.26.0.tgz"; + url = "https://registry.yarnpkg.com/@sentry/browser/-/browser-5.26.0.tgz"; + sha1 = "e90a197fb94c5f26c8e05d6a539c118f33c7d598"; }; } { - name = "_sentry_core___core_5.30.0.tgz"; + name = "_sentry_core___core_5.26.0.tgz"; path = fetchurl { - name = "_sentry_core___core_5.30.0.tgz"; - url = "https://registry.yarnpkg.com/@sentry/core/-/core-5.30.0.tgz"; - sha1 = "6b203664f69e75106ee8b5a2fe1d717379b331f3"; + name = "_sentry_core___core_5.26.0.tgz"; + url = "https://registry.yarnpkg.com/@sentry/core/-/core-5.26.0.tgz"; + sha1 = "9b5fe4de8a869d733ebcc77f5ec9c619f8717a51"; }; } { - name = "_sentry_hub___hub_5.30.0.tgz"; + name = "_sentry_hub___hub_5.26.0.tgz"; path = fetchurl { - name = "_sentry_hub___hub_5.30.0.tgz"; - url = "https://registry.yarnpkg.com/@sentry/hub/-/hub-5.30.0.tgz"; - sha1 = "2453be9b9cb903404366e198bd30c7ca74cdc100"; + name = "_sentry_hub___hub_5.26.0.tgz"; + url = "https://registry.yarnpkg.com/@sentry/hub/-/hub-5.26.0.tgz"; + sha1 = "b2bbd8128cd5915f2ee59cbc29fff30272d74ec5"; }; } { - name = "_sentry_minimal___minimal_5.30.0.tgz"; + name = "_sentry_minimal___minimal_5.26.0.tgz"; path = fetchurl { - name = "_sentry_minimal___minimal_5.30.0.tgz"; - url = "https://registry.yarnpkg.com/@sentry/minimal/-/minimal-5.30.0.tgz"; - sha1 = "ce3d3a6a273428e0084adcb800bc12e72d34637b"; + name = "_sentry_minimal___minimal_5.26.0.tgz"; + url = "https://registry.yarnpkg.com/@sentry/minimal/-/minimal-5.26.0.tgz"; + sha1 = "851dea3644153ed3ac4837fa8ed5661d94e7a313"; }; } { - name = "_sentry_types___types_5.30.0.tgz"; + name = "_sentry_types___types_5.26.0.tgz"; path = fetchurl { - name = "_sentry_types___types_5.30.0.tgz"; - url = "https://registry.yarnpkg.com/@sentry/types/-/types-5.30.0.tgz"; - sha1 = "19709bbe12a1a0115bc790b8942917da5636f402"; + name = "_sentry_types___types_5.26.0.tgz"; + url = "https://registry.yarnpkg.com/@sentry/types/-/types-5.26.0.tgz"; + sha1 = "b0cbacb0b24cd86620fb296b46cf7277bb004a3e"; }; } { - name = "_sentry_utils___utils_5.30.0.tgz"; + name = "_sentry_utils___utils_5.26.0.tgz"; path = fetchurl { - name = "_sentry_utils___utils_5.30.0.tgz"; - url = "https://registry.yarnpkg.com/@sentry/utils/-/utils-5.30.0.tgz"; - sha1 = "9a5bd7ccff85ccfe7856d493bffa64cabc41e980"; + name = "_sentry_utils___utils_5.26.0.tgz"; + url = "https://registry.yarnpkg.com/@sentry/utils/-/utils-5.26.0.tgz"; + sha1 = "09a3d01d91747f38f796cafeb24f8fd86e4fa05f"; }; } { @@ -1154,203 +1154,203 @@ }; } { - name = "_tiptap_core___core_2.0.0_beta.54.tgz"; + name = "_tiptap_core___core_2.0.0_beta.75.tgz"; path = fetchurl { - name = "_tiptap_core___core_2.0.0_beta.54.tgz"; - url = "https://registry.yarnpkg.com/@tiptap/core/-/core-2.0.0-beta.54.tgz"; - sha1 = "3630c78aab0a72cff0ffa5dda7ff7a2623a307e5"; + name = "_tiptap_core___core_2.0.0_beta.75.tgz"; + url = "https://registry.yarnpkg.com/@tiptap/core/-/core-2.0.0-beta.75.tgz"; + sha1 = "8295dfa7ca4b22de61e9c68a102763343b26e03a"; }; } { - name = "_tiptap_extension_blockquote___extension_blockquote_2.0.0_beta.11.tgz"; + name = "_tiptap_extension_blockquote___extension_blockquote_2.0.0_beta.13.tgz"; path = fetchurl { - 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name = "bootstrap_vue___bootstrap_vue_2.17.3.tgz"; - url = "https://registry.yarnpkg.com/bootstrap-vue/-/bootstrap-vue-2.17.3.tgz"; - sha1 = "3d78b7b4ff992a8ad69d2ed1c7413fcfdcefaec7"; + name = "boolbase___boolbase_1.0.0.tgz"; + url = "https://registry.yarnpkg.com/boolbase/-/boolbase-1.0.0.tgz"; + sha1 = "68dff5fbe60c51eb37725ea9e3ed310dcc1e776e"; + }; + } + { + name = "bootstrap_vue___bootstrap_vue_2.18.1.tgz"; + path = fetchurl { + name = "bootstrap_vue___bootstrap_vue_2.18.1.tgz"; + url = "https://registry.yarnpkg.com/bootstrap-vue/-/bootstrap-vue-2.18.1.tgz"; + sha1 = "4378d26b713d4255b45b42b3f852f6fa0a11d400"; }; } { @@ -3153,6 +3161,22 @@ sha1 = "c0a1d2f3a7092e03774bfa83f14c0fc5790a8667"; }; } + { + name = "cheerio_select___cheerio_select_1.4.0.tgz"; + path = fetchurl { + name = "cheerio_select___cheerio_select_1.4.0.tgz"; + url = "https://registry.yarnpkg.com/cheerio-select/-/cheerio-select-1.4.0.tgz"; + sha1 = "3a16f21e37a2ef0f211d6d1aa4eff054bb22cdc9"; + }; + } + { + name = "cheerio___cheerio_1.0.0_rc.9.tgz"; + path = fetchurl { + name = "cheerio___cheerio_1.0.0_rc.9.tgz"; + url = "https://registry.yarnpkg.com/cheerio/-/cheerio-1.0.0-rc.9.tgz"; + sha1 = "a3ae6b7ce7af80675302ff836f628e7cb786a67f"; + }; + } { name = "chokidar___chokidar_3.4.0.tgz"; path = fetchurl { @@ -3386,11 +3410,11 @@ }; } { - name = "colorette___colorette_1.2.1.tgz"; + name = "colorette___colorette_1.2.2.tgz"; path = fetchurl { - name = "colorette___colorette_1.2.1.tgz"; - url = "https://registry.yarnpkg.com/colorette/-/colorette-1.2.1.tgz"; - sha1 = "4d0b921325c14faf92633086a536db6e89564b1b"; + name = "colorette___colorette_1.2.2.tgz"; + url = "https://registry.yarnpkg.com/colorette/-/colorette-1.2.2.tgz"; + sha1 = "cbcc79d5e99caea2dbf10eb3a26fd8b3e6acfa94"; }; } { @@ -3554,11 +3578,11 @@ }; } { - name = "consola___consola_2.10.1.tgz"; + name = "consola___consola_2.15.3.tgz"; path = fetchurl { - name = "consola___consola_2.10.1.tgz"; - url = "https://registry.yarnpkg.com/consola/-/consola-2.10.1.tgz"; - sha1 = "4693edba714677c878d520e4c7e4f69306b4b927"; + name = "consola___consola_2.15.3.tgz"; + url = "https://registry.yarnpkg.com/consola/-/consola-2.15.3.tgz"; + sha1 = "2e11f98d6a4be71ff72e0bdf07bd23e12cb61550"; }; } { @@ -3690,11 +3714,11 @@ }; } { - name = "core_js___core_js_3.12.1.tgz"; + name = "core_js___core_js_3.13.0.tgz"; path = fetchurl { - name = "core_js___core_js_3.12.1.tgz"; - url = "https://registry.yarnpkg.com/core-js/-/core-js-3.12.1.tgz"; - sha1 = "6b5af4ff55616c08a44d386f1f510917ff204112"; + name = "core_js___core_js_3.13.0.tgz"; + url = "https://registry.yarnpkg.com/core-js/-/core-js-3.13.0.tgz"; + sha1 = "58ca436bf01d6903aee3d364089868d0d89fe58d"; }; } { @@ -3825,6 +3849,14 @@ sha1 = "d8254f72e412bb2238bb44dd674ffbef497333ea"; }; } + { + name = "css_select___css_select_4.1.2.tgz"; + path = fetchurl { + name = "css_select___css_select_4.1.2.tgz"; + url = "https://registry.yarnpkg.com/css-select/-/css-select-4.1.2.tgz"; + sha1 = "8b52b6714ed3a80d8221ec971c543f3b12653286"; + }; + } { name = "css_selector_parser___css_selector_parser_1.3.0.tgz"; path = fetchurl { @@ -3849,6 +3881,14 @@ sha1 = "128b7ce103d4dc027a814a5d5995c54781d7b4c6"; }; } + { + name = "css_what___css_what_5.0.0.tgz"; + path = fetchurl { + name = "css_what___css_what_5.0.0.tgz"; + url = "https://registry.yarnpkg.com/css-what/-/css-what-5.0.0.tgz"; + sha1 = "f0bf4f8bac07582722346ab243f6a35b512cfc47"; + }; + } { name = "css___css_2.2.4.tgz"; path = fetchurl { @@ -4234,11 +4274,11 @@ }; } { - name = "dateformat___dateformat_3.0.3.tgz"; + name = "dateformat___dateformat_4.5.1.tgz"; path = fetchurl { - name = "dateformat___dateformat_3.0.3.tgz"; - url = "https://registry.yarnpkg.com/dateformat/-/dateformat-3.0.3.tgz"; - sha1 = "a6e37499a4d9a9cf85ef5872044d62901c9889ae"; + name = "dateformat___dateformat_4.5.1.tgz"; + url = "https://registry.yarnpkg.com/dateformat/-/dateformat-4.5.1.tgz"; + sha1 = "c20e7a9ca77d147906b6dc2261a8be0a5bd2173c"; }; } { @@ -4585,14 +4625,6 @@ sha1 = "addebead72a6574db783639dc87a121773973961"; }; } - { - name = "document_register_element___document_register_element_1.14.3.tgz"; - path = fetchurl { - name = "document_register_element___document_register_element_1.14.3.tgz"; - url = "https://registry.yarnpkg.com/document-register-element/-/document-register-element-1.14.3.tgz"; - sha1 = "3335d4578df6a1536a34595b91cca36dd5db61d7"; - }; - } { name = "dom_accessibility_api___dom_accessibility_api_0.5.3.tgz"; path = fetchurl { @@ -4625,6 +4657,14 @@ sha1 = "1afb81f533717175d478655debc5e332d9f9bb51"; }; } + { + name = "dom_serializer___dom_serializer_1.3.1.tgz"; + path = fetchurl { + name = "dom_serializer___dom_serializer_1.3.1.tgz"; + url = "https://registry.yarnpkg.com/dom-serializer/-/dom-serializer-1.3.1.tgz"; + sha1 = "d845a1565d7c041a95e5dab62184ab41e3a519be"; + }; + } { name = "dom_walk___dom_walk_0.1.2.tgz"; path = fetchurl { @@ -4650,11 +4690,11 @@ }; } { - name = "domelementtype___domelementtype_2.1.0.tgz"; + name = "domelementtype___domelementtype_2.2.0.tgz"; path = fetchurl { - name = "domelementtype___domelementtype_2.1.0.tgz"; - url = "https://registry.yarnpkg.com/domelementtype/-/domelementtype-2.1.0.tgz"; - sha1 = "a851c080a6d1c3d94344aed151d99f669edf585e"; + name = "domelementtype___domelementtype_2.2.0.tgz"; + url = "https://registry.yarnpkg.com/domelementtype/-/domelementtype-2.2.0.tgz"; + sha1 = "9a0b6c2782ed6a1c7323d42267183df9bd8b1d57"; }; } { @@ -4674,11 +4714,19 @@ }; } { - name = "dompurify___dompurify_2.2.8.tgz"; + name = "domhandler___domhandler_4.2.0.tgz"; path = fetchurl { - name = "dompurify___dompurify_2.2.8.tgz"; - url = "https://registry.yarnpkg.com/dompurify/-/dompurify-2.2.8.tgz"; - sha1 = "ce88e395f6d00b6dc53f80d6b2a6fdf5446873c6"; + name = "domhandler___domhandler_4.2.0.tgz"; + url = "https://registry.yarnpkg.com/domhandler/-/domhandler-4.2.0.tgz"; + sha1 = "f9768a5f034be60a89a27c2e4d0f74eba0d8b059"; + }; + } + { + name = "dompurify___dompurify_2.2.9.tgz"; + path = fetchurl { + name = "dompurify___dompurify_2.2.9.tgz"; + url = "https://registry.yarnpkg.com/dompurify/-/dompurify-2.2.9.tgz"; + sha1 = "4b42e244238032d9286a0d2c87b51313581d9624"; }; } { @@ -4689,6 +4737,14 @@ sha1 = "56ea341e834e06e6748af7a1cb25da67ea9f8c2a"; }; } + { + name = "domutils___domutils_2.6.0.tgz"; + path = fetchurl { + name = "domutils___domutils_2.6.0.tgz"; + url = "https://registry.yarnpkg.com/domutils/-/domutils-2.6.0.tgz"; + sha1 = "2e15c04185d43fb16ae7057cb76433c6edb938b7"; + }; + } { name = "dot_prop___dot_prop_5.2.0.tgz"; path = fetchurl { @@ -5025,6 +5081,14 @@ sha1 = "a30304e99daa32e23b2fd20f51babd07cffca344"; }; } + { + name = "escape_string_regexp___escape_string_regexp_4.0.0.tgz"; + path = fetchurl { + name = "escape_string_regexp___escape_string_regexp_4.0.0.tgz"; + url = "https://registry.yarnpkg.com/escape-string-regexp/-/escape-string-regexp-4.0.0.tgz"; + sha1 = "14ba83a5d373e3d311e5afca29cf5bfad965bf34"; + }; + } { name = "escodegen___escodegen_1.14.3.tgz"; path = fetchurl { @@ -5194,11 +5258,11 @@ }; } { - name = "eslint___eslint_7.26.0.tgz"; + name = "eslint___eslint_7.28.0.tgz"; path = fetchurl { - name = "eslint___eslint_7.26.0.tgz"; - url = "https://registry.yarnpkg.com/eslint/-/eslint-7.26.0.tgz"; - sha1 = "d416fdcdcb3236cd8f282065312813f8c13982f6"; + name = "eslint___eslint_7.28.0.tgz"; + url = "https://registry.yarnpkg.com/eslint/-/eslint-7.28.0.tgz"; + sha1 = "435aa17a0b82c13bb2be9d51408b617e49c1e820"; }; } { @@ -5938,11 +6002,11 @@ }; } { - name = "glob___glob_7.1.6.tgz"; + name = "glob___glob_7.1.7.tgz"; path = fetchurl { - name = "glob___glob_7.1.6.tgz"; - url = "https://registry.yarnpkg.com/glob/-/glob-7.1.6.tgz"; - sha1 = "141f33b81a7c2492e125594307480c46679278a6"; + name = "glob___glob_7.1.7.tgz"; + url = "https://registry.yarnpkg.com/glob/-/glob-7.1.7.tgz"; + sha1 = "3b193e9233f01d42d0b3f78294bbeeb418f94a90"; }; } { @@ -6002,19 +6066,11 @@ }; } { - name = "globals___globals_12.3.0.tgz"; + name = "globals___globals_13.9.0.tgz"; path = fetchurl { - name = "globals___globals_12.3.0.tgz"; - url = "https://registry.yarnpkg.com/globals/-/globals-12.3.0.tgz"; - sha1 = "1e564ee5c4dded2ab098b0f88f24702a3c56be13"; - }; - } - { - name = "globals___globals_13.8.0.tgz"; - path = fetchurl { - name = "globals___globals_13.8.0.tgz"; - url = "https://registry.yarnpkg.com/globals/-/globals-13.8.0.tgz"; - sha1 = "3e20f504810ce87a8d72e55aecf8435b50f4c1b3"; + name = "globals___globals_13.9.0.tgz"; + url = "https://registry.yarnpkg.com/globals/-/globals-13.9.0.tgz"; + sha1 = "4bf2bf635b334a173fb1daf7c5e6b218ecdc06cb"; }; } { @@ -6377,6 +6433,14 @@ sha1 = "bd679dc3f59897b6a34bb10749c855bb53a9392f"; }; } + { + name = "htmlparser2___htmlparser2_6.1.0.tgz"; + path = fetchurl { + name = "htmlparser2___htmlparser2_6.1.0.tgz"; + url = "https://registry.yarnpkg.com/htmlparser2/-/htmlparser2-6.1.0.tgz"; + sha1 = "c4d762b6c3371a05dbe65e94ae43a9f845fb8fb7"; + }; + } { name = "http_cache_semantics___http_cache_semantics_4.1.0.tgz"; path = fetchurl { @@ -7634,11 +7698,11 @@ }; } { - name = "jquery___jquery_3.5.1.tgz"; + name = "jquery___jquery_3.6.0.tgz"; path = fetchurl { - name = "jquery___jquery_3.5.1.tgz"; - url = "https://registry.yarnpkg.com/jquery/-/jquery-3.5.1.tgz"; - sha1 = "d7b4d08e1bfdb86ad2f1a3d039ea17304717abb5"; + name = "jquery___jquery_3.6.0.tgz"; + url = "https://registry.yarnpkg.com/jquery/-/jquery-3.6.0.tgz"; + sha1 = "c72a09f15c1bdce142f49dbf1170bdf8adac2470"; }; } { @@ -8065,14 +8129,6 @@ sha1 = "9a436b2cc7746ca59de7a41fa469b3efb76bd87e"; }; } - { - name = "lightercollective___lightercollective_0.3.0.tgz"; - path = fetchurl { - name = "lightercollective___lightercollective_0.3.0.tgz"; - url = "https://registry.yarnpkg.com/lightercollective/-/lightercollective-0.3.0.tgz"; - sha1 = "1f07638642ec645d70bdb69ab2777676f35a28f0"; - }; - } { name = "lines_and_columns___lines_and_columns_1.1.6.tgz"; path = fetchurl { @@ -8313,6 +8369,14 @@ sha1 = "1bafa5005de9dd6f4f26668c30ca37230cc9689c"; }; } + { + name = "lodash.merge___lodash.merge_4.6.2.tgz"; + path = fetchurl { + name = "lodash.merge___lodash.merge_4.6.2.tgz"; + url = "https://registry.yarnpkg.com/lodash.merge/-/lodash.merge-4.6.2.tgz"; + sha1 = "558aa53b43b661e1925a0afdfa36a9a1085fe57a"; + }; + } { name = "lodash.pick___lodash.pick_4.4.0.tgz"; path = fetchurl { @@ -8337,6 +8401,14 @@ sha1 = "edd14c824e2cc9c1e0b0a1b42bb5210516a42438"; }; } + { + name = "lodash.truncate___lodash.truncate_4.4.2.tgz"; + path = fetchurl { + name = "lodash.truncate___lodash.truncate_4.4.2.tgz"; + url = "https://registry.yarnpkg.com/lodash.truncate/-/lodash.truncate-4.4.2.tgz"; + sha1 = "5a350da0b1113b837ecfffd5812cbe58d6eae193"; + }; + } { name = "lodash.uniq___lodash.uniq_4.5.0.tgz"; path = fetchurl { @@ -8738,11 +8810,11 @@ }; } { - name = "mermaid___mermaid_8.9.2.tgz"; + name = "mermaid___mermaid_8.10.2.tgz"; path = fetchurl { - name = "mermaid___mermaid_8.9.2.tgz"; - url = "https://registry.yarnpkg.com/mermaid/-/mermaid-8.9.2.tgz"; - sha1 = "40bb2052cc6c4feaf5d93a5e527a8d06d0bacea7"; + name = "mermaid___mermaid_8.10.2.tgz"; + url = "https://registry.yarnpkg.com/mermaid/-/mermaid-8.10.2.tgz"; + sha1 = "e039df2e42faba08743f167fff85bdccff241f76"; }; } { @@ -9081,6 +9153,14 @@ sha1 = "6e7de86a570872ab17058adea7160bbeca814dde"; }; } + { + name = "nanoid___nanoid_3.1.23.tgz"; + path = fetchurl { + name = "nanoid___nanoid_3.1.23.tgz"; + url = "https://registry.yarnpkg.com/nanoid/-/nanoid-3.1.23.tgz"; + sha1 = "f744086ce7c2bc47ee0a8472574d5c78e4183a81"; + }; + } { name = "nanomatch___nanomatch_1.2.13.tgz"; path = fetchurl { @@ -9289,6 +9369,14 @@ sha1 = "b7ecd1e5ed53da8e37a55e1c2269e0b97ed748ea"; }; } + { + name = "nth_check___nth_check_2.0.0.tgz"; + path = fetchurl { + name = "nth_check___nth_check_2.0.0.tgz"; + url = "https://registry.yarnpkg.com/nth-check/-/nth-check-2.0.0.tgz"; + sha1 = "1bb4f6dac70072fc313e8c9cd1417b5074c0a125"; + }; + } { name = "num2fraction___num2fraction_1.2.2.tgz"; path = fetchurl { @@ -9729,6 +9817,22 @@ sha1 = "6d5b934a456993b23d37f40a382d6f1666a8e5c6"; }; } + { + name = "parse5_htmlparser2_tree_adapter___parse5_htmlparser2_tree_adapter_6.0.1.tgz"; + path = fetchurl { + name = "parse5_htmlparser2_tree_adapter___parse5_htmlparser2_tree_adapter_6.0.1.tgz"; + url = "https://registry.yarnpkg.com/parse5-htmlparser2-tree-adapter/-/parse5-htmlparser2-tree-adapter-6.0.1.tgz"; + sha1 = "2cdf9ad823321140370d4dbf5d3e92c7c8ddc6e6"; + }; + } + { + name = "parse5___parse5_6.0.1.tgz"; + path = fetchurl { + name = "parse5___parse5_6.0.1.tgz"; + url = "https://registry.yarnpkg.com/parse5/-/parse5-6.0.1.tgz"; + sha1 = "e1a1c085c569b3dc08321184f19a39cc27f7c30b"; + }; + } { name = "parse5___parse5_5.1.1.tgz"; path = fetchurl { @@ -10129,6 +10233,14 @@ sha1 = "d2be00b998f7f211d8a276974079f2e92b970e24"; }; } + { + name = "postcss___postcss_8.2.15.tgz"; + path = fetchurl { + name = "postcss___postcss_8.2.15.tgz"; + url = "https://registry.yarnpkg.com/postcss/-/postcss-8.2.15.tgz"; + sha1 = "9e66ccf07292817d226fc315cbbf9bc148fbca65"; + }; + } { name = "prelude_ls___prelude_ls_1.2.1.tgz"; path = fetchurl { @@ -10274,19 +10386,19 @@ }; } { - name = "prosemirror_commands___prosemirror_commands_1.1.7.tgz"; + name = "prosemirror_commands___prosemirror_commands_1.1.8.tgz"; path = fetchurl { - name = "prosemirror_commands___prosemirror_commands_1.1.7.tgz"; - url = "https://registry.yarnpkg.com/prosemirror-commands/-/prosemirror-commands-1.1.7.tgz"; - sha1 = "5b31ae0fe82835d36d22c780641c0b651f27dd03"; + name = "prosemirror_commands___prosemirror_commands_1.1.8.tgz"; + url = "https://registry.yarnpkg.com/prosemirror-commands/-/prosemirror-commands-1.1.8.tgz"; + sha1 = "61aec59ac101b7990ec59726199f2a31ef0cd8ca"; }; } { - name = "prosemirror_dropcursor___prosemirror_dropcursor_1.3.4.tgz"; + name = "prosemirror_dropcursor___prosemirror_dropcursor_1.3.5.tgz"; path = fetchurl { - name = "prosemirror_dropcursor___prosemirror_dropcursor_1.3.4.tgz"; - url = "https://registry.yarnpkg.com/prosemirror-dropcursor/-/prosemirror-dropcursor-1.3.4.tgz"; - sha1 = "a7f799ff9ecb520d3e1dbb3cb39d27ce41066618"; + name = "prosemirror_dropcursor___prosemirror_dropcursor_1.3.5.tgz"; + url = "https://registry.yarnpkg.com/prosemirror-dropcursor/-/prosemirror-dropcursor-1.3.5.tgz"; + sha1 = "d2808c17089df0e441ad66016aecc2b6457c8a1f"; }; } { @@ -10370,11 +10482,11 @@ }; } { - name = "prosemirror_view___prosemirror_view_1.18.4.tgz"; + name = "prosemirror_view___prosemirror_view_1.18.7.tgz"; path = fetchurl { - name = "prosemirror_view___prosemirror_view_1.18.4.tgz"; - url = "https://registry.yarnpkg.com/prosemirror-view/-/prosemirror-view-1.18.4.tgz"; - sha1 = "179141df117cf414434ade08115f2e233d135f6d"; + name = "prosemirror_view___prosemirror_view_1.18.7.tgz"; + url = "https://registry.yarnpkg.com/prosemirror-view/-/prosemirror-view-1.18.7.tgz"; + sha1 = "d9843337a1649f532401589899b724e7e87e83c0"; }; } { @@ -10481,6 +10593,22 @@ sha1 = "dbdc9ff48ffbea4a26a069b6f9f7abb051008726"; }; } + { + name = "purgecss_from_html___purgecss_from_html_4.0.3.tgz"; + path = fetchurl { + name = "purgecss_from_html___purgecss_from_html_4.0.3.tgz"; + url = "https://registry.yarnpkg.com/purgecss-from-html/-/purgecss-from-html-4.0.3.tgz"; + sha1 = "28d86d3dc8292581c4ab529a77a57daf7c2dd940"; + }; + } + { + name = "purgecss___purgecss_4.0.3.tgz"; + path = fetchurl { + name = "purgecss___purgecss_4.0.3.tgz"; + url = "https://registry.yarnpkg.com/purgecss/-/purgecss-4.0.3.tgz"; + sha1 = "8147b429f9c09db719e05d64908ea8b672913742"; + }; + } { name = "qjobs___qjobs_1.2.0.tgz"; path = fetchurl { @@ -12058,11 +12186,11 @@ }; } { - name = "table___table_6.0.7.tgz"; + name = "table___table_6.7.1.tgz"; path = fetchurl { - name = "table___table_6.0.7.tgz"; - url = "https://registry.yarnpkg.com/table/-/table-6.0.7.tgz"; - sha1 = "e45897ffbcc1bcf9e8a87bf420f2c9e5a7a52a34"; + name = "table___table_6.7.1.tgz"; + url = "https://registry.yarnpkg.com/table/-/table-6.7.1.tgz"; + sha1 = "ee05592b7143831a8c94f3cee6aae4c1ccef33e2"; }; } { @@ -12473,6 +12601,14 @@ sha1 = "c881e13cc7015894ed914862d276436fa9a47043"; }; } + { + name = "tslib___tslib_2.2.0.tgz"; + path = fetchurl { + name = "tslib___tslib_2.2.0.tgz"; + url = "https://registry.yarnpkg.com/tslib/-/tslib-2.2.0.tgz"; + sha1 = "fb2c475977e35e241311ede2693cee1ec6698f5c"; + }; + } { name = "tsutils___tsutils_3.17.1.tgz"; path = fetchurl { diff --git a/third_party/nixpkgs/pkgs/applications/version-management/gitolite/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/gitolite/default.nix index 8dd2766ff0..e9712a859d 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/gitolite/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/gitolite/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, git, lib, makeWrapper, nettools, perl }: +{ stdenv, fetchFromGitHub, git, lib, makeWrapper, nettools, perl, perlPackages }: stdenv.mkDerivation rec { pname = "gitolite"; @@ -29,7 +29,7 @@ stdenv.mkDerivation rec { postFixup = '' wrapProgram $out/bin/gitolite-shell \ - --prefix PATH : ${lib.makeBinPath [ git perl ]} + --prefix PATH : ${lib.makeBinPath [ git (perl.withPackages (p: [ p.JSON ])) ]} ''; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/applications/version-management/mercurial/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/mercurial/default.nix index 3caf499d31..df58b2162f 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/mercurial/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/mercurial/default.nix @@ -20,12 +20,12 @@ in python3Packages.buildPythonApplication rec { patches = [ # https://phab.mercurial-scm.org/D10638, needed for below patch to apply (fetchpatch { - url = "https://phab.mercurial-scm.org/file/data/oymk4awh2dd7q6cwjbzu/PHID-FILE-bfcr7qrp5spg42wspxpd/D10638.diff"; + url = "https://phab.mercurial-scm.org/file/data/l7p2r4zcctcr3pzlybv2/PHID-FILE-bwjzxlz6sbegk3s4irik/D10638.diff"; sha256 = "0mfi324is02l7cnd3j0gbmg5rpyyqn3afg3f73flnfwmz5njqa5f"; }) # https://phab.mercurial-scm.org/D10639, fixes https://bz.mercurial-scm.org/show_bug.cgi?id=6514 (fetchpatch { - url = "https://phab.mercurial-scm.org/file/data/re4uqdhtknjiacx2ogwu/PHID-FILE-4m26id65dno5gzix2ngh/D10639.diff"; + url = "https://phab.mercurial-scm.org/file/data/v53nhburhtkhpccyecei/PHID-FILE-6v34oll6r2gkqo4ng5nt/D10639.diff"; sha256 = "0h5ilrd2x1789fr6sf4k1mcvxdh0xdyr94yawdacw87v3x12c8cb"; }) ]; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/rcs/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/rcs/default.nix index f814371131..d814e0ca0a 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/rcs/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/rcs/default.nix @@ -1,55 +1,21 @@ -{ lib, stdenv, fetchurl, fetchpatch, ed }: +{ lib, stdenv, fetchurl, fetchpatch, buildPackages, diffutils, ed }: stdenv.mkDerivation rec { - name = "rcs-5.9.4"; + pname = "rcs"; + version = "5.10.0"; src = fetchurl { - url = "mirror://gnu/rcs/${name}.tar.xz"; - sha256 = "1zsx7bb0rgvvvisiy4zlixf56ay8wbd9qqqcp1a1g0m1gl6mlg86"; + url = "mirror://gnu/rcs/${pname}-${version}.tar.xz"; + sha256 = "sha256-Og2flYx60wPkdehjRlSXTtvm3rOkVEkfOFfcGIm6xcU"; }; - buildInputs = [ ed ]; + ac_cv_path_ED = "${ed}/bin/ed"; + DIFF = "${diffutils}/bin/diff"; + DIFF3 = "${diffutils}/bin/diff3"; - patches = lib.optionals stdenv.isDarwin [ - # This failure appears unrelated to the subject of the test. This - # test seems to rely on a bash bug where `test $x -nt $y` ignores - # subsecond values in timetamps. This bug has been fixed in Bash - # 5, and seemingly doesn't affect Darwin. - ./disable-t810.patch - - (fetchpatch { - url = "https://raw.githubusercontent.com/macports/macports-ports/b76d1e48dac/editors/nano/files/secure_snprintf.patch"; - extraPrefix = ""; - sha256 = "1wy9pjw3vvp8fv8a7pmkqmiapgacfx54qj9fvsc5gwry0vv7vnc3"; - }) - - # Expected to appear in the next release - (fetchpatch { - url = "https://raw.githubusercontent.com/Homebrew/formula-patches/3fff7c990b8df4174045834b9c1210e7736ff5a4/rcs/noreturn.patch"; - sha256 = "10zniqrd6xagf3q03i1vksl0vd9nla3qcj0840n3m8z6jd4aypcx"; - }) - ]; - - doCheck = true; - - checkFlags = [ "VERBOSE=1" ]; - - checkPhase = '' - # If neither LOGNAME or USER are set, rcs will default to - # getlogin(), which is unreliable on macOS. It will often return - # things like `_spotlight`, or `_mbsetupuser`. macOS sets both - # environment variables in user sessions, so this is unlikely to - # affect regular usage. - - export LOGNAME=$(id -un) - - print_logs_and_fail() { - grep -nH -e . -r tests/*.d/{out,err} - return 1 - } - - make $checkFlags check || print_logs_and_fail - ''; + disallowedReferences = + lib.optionals (stdenv.hostPlatform != stdenv.buildPlatform) + [ buildPackages.diffutils buildPackages.ed ]; NIX_CFLAGS_COMPILE = "-std=c99"; diff --git a/third_party/nixpkgs/pkgs/applications/version-management/rcs/disable-t810.patch b/third_party/nixpkgs/pkgs/applications/version-management/rcs/disable-t810.patch deleted file mode 100644 index 745f1868a3..0000000000 --- a/third_party/nixpkgs/pkgs/applications/version-management/rcs/disable-t810.patch +++ /dev/null @@ -1,10 +0,0 @@ ---- rcs-5.9.4-orig/tests/Makefile.in 2015-01-22 19:40:36.000000000 +0900 -+++ rcs-5.9.4/tests/Makefile.in 2019-04-16 20:04:30.557626000 +0900 -@@ -1372,7 +1372,6 @@ - t803 \ - t804 \ - t805 \ -- t810 \ - t900 \ - t999 - diff --git a/third_party/nixpkgs/pkgs/applications/version-management/srcml/default.nix b/third_party/nixpkgs/pkgs/applications/version-management/srcml/default.nix index c13a08a711..11dbfc299a 100644 --- a/third_party/nixpkgs/pkgs/applications/version-management/srcml/default.nix +++ b/third_party/nixpkgs/pkgs/applications/version-management/srcml/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, cmake, libxml2, libxslt, boost, libarchive, python, antlr, +{ lib, stdenv, fetchurl, cmake, libxml2, libxslt, boost, libarchive, python, antlr2, curl }: @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { ./gcc6.patch ]; - nativeBuildInputs = [ cmake antlr ]; + nativeBuildInputs = [ cmake antlr2 ]; buildInputs = [ libxml2 libxslt boost libarchive python curl ]; meta = { diff --git a/third_party/nixpkgs/pkgs/applications/video/aegisub/default.nix b/third_party/nixpkgs/pkgs/applications/video/aegisub/default.nix index 7d041f60f4..133840e066 100644 --- a/third_party/nixpkgs/pkgs/applications/video/aegisub/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/aegisub/default.nix @@ -30,7 +30,7 @@ , openal ? null , alsaSupport ? stdenv.isLinux -, alsaLib ? null +, alsa-lib ? null , pulseaudioSupport ? config.pulseaudio or stdenv.isLinux , libpulseaudio ? null @@ -42,7 +42,7 @@ assert spellcheckSupport -> (hunspell != null); assert automationSupport -> (lua != null); assert openalSupport -> (openal != null); -assert alsaSupport -> (alsaLib != null); +assert alsaSupport -> (alsa-lib != null); assert pulseaudioSupport -> (libpulseaudio != null); assert portaudioSupport -> (portaudio != null); @@ -112,7 +112,7 @@ stdenv.mkDerivation rec { wxGTK zlib ] - ++ optional alsaSupport alsaLib + ++ optional alsaSupport alsa-lib ++ optional automationSupport lua ++ optional openalSupport openal ++ optional portaudioSupport portaudio diff --git a/third_party/nixpkgs/pkgs/applications/video/avidemux/default.nix b/third_party/nixpkgs/pkgs/applications/video/avidemux/default.nix index 9b2073bc79..fe767759a8 100644 --- a/third_party/nixpkgs/pkgs/applications/video/avidemux/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/avidemux/default.nix @@ -2,7 +2,7 @@ , zlib, gettext, libvdpau, libva, libXv, sqlite , yasm, freetype, fontconfig, fribidi , makeWrapper, libXext, libGLU, qttools, qtbase, wrapQtAppsHook -, alsaLib +, alsa-lib , withX265 ? true, x265 , withX264 ? true, x264 , withXvid ? true, xvidcore @@ -42,7 +42,7 @@ stdenv.mkDerivation rec { ++ lib.optional withQT wrapQtAppsHook; buildInputs = [ zlib gettext libvdpau libva libXv sqlite fribidi fontconfig - freetype alsaLib libXext libGLU makeWrapper + freetype alsa-lib libXext libGLU makeWrapper ] ++ lib.optional withX264 x264 ++ lib.optional withX265 x265 ++ lib.optional withXvid xvidcore diff --git a/third_party/nixpkgs/pkgs/applications/video/ccextractor/default.nix b/third_party/nixpkgs/pkgs/applications/video/ccextractor/default.nix index 881e6b687e..aa40291790 100644 --- a/third_party/nixpkgs/pkgs/applications/video/ccextractor/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/ccextractor/default.nix @@ -4,13 +4,13 @@ with lib; stdenv.mkDerivation rec { pname = "ccextractor"; - version = "0.88"; + version = "0.89"; src = fetchFromGitHub { owner = "CCExtractor"; repo = pname; rev = "v${version}"; - sha256 = "1sya45hvv4d46bk7541yimmafgvgyhkpsvwfz9kv6pm4yi1lz6nb"; + sha256 = "sha256-847yt6pUTsDnVbrMQQPJ0pqu6UnKmYmr8UtR8+TP11A="; }; sourceRoot = "source/src"; diff --git a/third_party/nixpkgs/pkgs/applications/video/cinelerra/default.nix b/third_party/nixpkgs/pkgs/applications/video/cinelerra/default.nix index c81811ea93..75d3cdbcc6 100644 --- a/third_party/nixpkgs/pkgs/applications/video/cinelerra/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/cinelerra/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, autoconf, automake, libtool -, pkg-config, faad2, faac, a52dec, alsaLib, fftw, lame, libavc1394 +, pkg-config, faad2, faac, a52dec, alsa-lib, fftw, lame, libavc1394 , libiec61883, libraw1394, libsndfile, libvorbis, libogg, libjpeg , libtiff, freetype, mjpegtools, x264, gettext, openexr , libXext, libXxf86vm, libXv, libXi, libX11, libXft, xorgproto, libtheora, libpng @@ -31,7 +31,7 @@ stdenv.mkDerivation { nativeBuildInputs = [ automake autoconf libtool pkg-config file intltool ]; buildInputs = [ faad2 faac - a52dec alsaLib fftw lame libavc1394 libiec61883 + a52dec alsa-lib fftw lame libavc1394 libiec61883 libraw1394 libsndfile libvorbis libogg libjpeg libtiff freetype mjpegtools x264 gettext openexr libXext libXxf86vm libXv libXi libX11 libXft xorgproto diff --git a/third_party/nixpkgs/pkgs/applications/video/clickshare-csc1/default.nix b/third_party/nixpkgs/pkgs/applications/video/clickshare-csc1/default.nix index e4e72704fb..09b2466308 100644 --- a/third_party/nixpkgs/pkgs/applications/video/clickshare-csc1/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/clickshare-csc1/default.nix @@ -1,7 +1,7 @@ { lib , stdenv , fetchurl -, alsaLib +, alsa-lib , autoPatchelfHook , binutils-unwrapped , gnutar @@ -40,7 +40,7 @@ stdenv.mkDerivation rec { unzip ]; buildInputs = [ - alsaLib + alsa-lib libav_0_8 libnotify libresample diff --git a/third_party/nixpkgs/pkgs/applications/video/droidcam/default.nix b/third_party/nixpkgs/pkgs/applications/video/droidcam/default.nix index dfb110795f..38d3d6304c 100644 --- a/third_party/nixpkgs/pkgs/applications/video/droidcam/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/droidcam/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub -, ffmpeg, libjpeg_turbo, gtk3, alsaLib, speex, libusbmuxd, libappindicator-gtk3 +, ffmpeg, libjpeg_turbo, gtk3, alsa-lib, speex, libusbmuxd, libappindicator-gtk3 , pkg-config }: @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { ffmpeg libjpeg_turbo gtk3 - alsaLib + alsa-lib speex libusbmuxd libappindicator-gtk3 diff --git a/third_party/nixpkgs/pkgs/applications/video/flowblade/default.nix b/third_party/nixpkgs/pkgs/applications/video/flowblade/default.nix new file mode 100644 index 0000000000..2e50dfa121 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/video/flowblade/default.nix @@ -0,0 +1,45 @@ +{ lib, fetchFromGitHub, stdenv +, ffmpeg, frei0r, sox, gtk3, python3, ladspaPlugins +, gobject-introspection, makeWrapper, wrapGAppsHook +}: + +stdenv.mkDerivation rec { + pname = "flowblade"; + version = "2.8.0.3"; + + src = fetchFromGitHub { + owner = "jliljebl"; + repo = pname; + rev = "v${version}"; + sha256 = "sha256-/EkI3qiceB5eKTVQnpG+z4e6yaE9hDtn6I+iN/J+h/g="; + }; + + buildInputs = [ + ffmpeg frei0r sox gtk3 gobject-introspection ladspaPlugins + (python3.withPackages (ps: with ps; [ mlt pygobject3 dbus-python numpy pillow ])) + ]; + + nativeBuildInputs = [ gobject-introspection makeWrapper wrapGAppsHook ]; + + installPhase = '' + runHook preInstall + + mkdir -p $out + cp -a ${src}/flowblade-trunk $out/flowblade + + makeWrapper $out/flowblade/flowblade $out/bin/flowblade \ + --set FREI0R_PATH ${frei0r}/lib/frei0r-1 \ + --set LADSPA_PATH ${ladspaPlugins}/lib/ladspa \ + ''${gappsWrapperArgs[@]} + + runHook postInstall + ''; + + meta = with lib; { + description = "Multitrack Non-Linear Video Editor"; + homepage = "https://jliljebl.github.io/flowblade/"; + license = with licenses; [ gpl3Plus ]; + platforms = platforms.linux; + maintainers = with maintainers; [ polygon ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/video/freetube/default.nix b/third_party/nixpkgs/pkgs/applications/video/freetube/default.nix index 0dbc328459..5151f1f9e5 100644 --- a/third_party/nixpkgs/pkgs/applications/video/freetube/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/freetube/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "freetube"; - version = "0.13.1"; + version = "0.13.2"; src = fetchurl { url = "https://github.com/FreeTubeApp/FreeTube/releases/download/v${version}-beta/freetube_${version}_amd64.AppImage"; - sha256 = "sha256-DN78ASe29h7o6emCtN861arGqWKAWjjWKtsHs8jjROI="; + sha256 = "sha256:0rzx66nshzcrvvd9ky0wamvv5wb0xxlf3zi25xrxmh6haimqbrpv"; }; appimageContents = appimageTools.extractType2 { diff --git a/third_party/nixpkgs/pkgs/applications/video/imagination/default.nix b/third_party/nixpkgs/pkgs/applications/video/imagination/default.nix new file mode 100644 index 0000000000..732d8f547f --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/video/imagination/default.nix @@ -0,0 +1,45 @@ +{ lib, stdenv, fetchurl, autoreconfHook, docbook_xsl, ffmpeg-full, glib, gtk3 +, intltool, libxslt, pkg-config, sox, wrapGAppsHook }: + +stdenv.mkDerivation rec { + pname = "imagination"; + version = "3.6"; + + src = fetchurl { + url = "mirror://sourceforge/${pname}/${pname}-${version}.tar.gz"; + sha256 = "139dgb9vfr2q7bxvjskykdz526xxwrn0bh463ir8m2p7rx5a3pw5"; + }; + + nativeBuildInputs = [ + autoreconfHook + docbook_xsl + intltool + libxslt + pkg-config + wrapGAppsHook + ]; + + buildInputs = [ ffmpeg-full glib gtk3 sox ]; + + preBuild = '' + substituteInPlace src/main-window.c \ + --replace 'gtk_icon_theme_load_icon(icon_theme,"image", 20, 0, NULL)' \ + 'gtk_icon_theme_load_icon(icon_theme,"insert-image", 20, 0, NULL)' \ + --replace 'gtk_icon_theme_load_icon(icon_theme,"sound", 20, 0, NULL)' \ + 'gtk_icon_theme_load_icon(icon_theme,"audio-x-generic", 20, 0, NULL)' + ''; + + preFixup = '' + gappsWrapperArgs+=( + --prefix PATH : "${lib.makeBinPath [ ffmpeg-full sox ]}" + ) + ''; + + meta = with lib; { + description = "Lightweight and simple DVD slide show maker"; + homepage = "http://imagination.sourceforge.net"; + license = licenses.gpl3Only; + maintainers = with maintainers; [ austinbutler ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/video/kazam/default.nix b/third_party/nixpkgs/pkgs/applications/video/kazam/default.nix index 35b7d17325..f99b493087 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kazam/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kazam/default.nix @@ -1,5 +1,5 @@ { lib, fetchurl, substituteAll, python3, gst_all_1, wrapGAppsHook, gobject-introspection -, gtk3, libwnck3, keybinder3, intltool, libcanberra-gtk3, libappindicator-gtk3, libpulseaudio +, gtk3, libwnck, keybinder3, intltool, libcanberra-gtk3, libappindicator-gtk3, libpulseaudio , fetchpatch }: python3.pkgs.buildPythonApplication rec { @@ -14,7 +14,7 @@ python3.pkgs.buildPythonApplication rec { nativeBuildInputs = [ gobject-introspection python3.pkgs.distutils_extra intltool wrapGAppsHook ]; buildInputs = [ - gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good gtk3 libwnck3 + gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good gtk3 libwnck keybinder3 libappindicator-gtk3 ]; diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/a4ksubtitles/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/a4ksubtitles/default.nix index 5d714cf179..8b91b5e5fa 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/a4ksubtitles/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/a4ksubtitles/default.nix @@ -3,13 +3,13 @@ buildKodiAddon rec { pname = "a4ksubtitles"; namespace = "service.subtitles.a4ksubtitles"; - version = "2.3.0"; + version = "2.6.0"; src = fetchFromGitHub { owner = "a4k-openproject"; repo = "a4kSubtitles"; rev = "${namespace}/${namespace}-${version}"; - sha256 = "0hxvxkbihfyvixmlxf5n4ccn70w0244hhw3hr44rqvx00a0bg1lh"; + sha256 = "1rzgrxdcws064ji65fdbzzmgd2pdlaak3apa5n1clkmzknn7n881"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/certifi/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/certifi/default.nix index d122cacc87..b99a64f3ee 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/certifi/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/certifi/default.nix @@ -2,11 +2,11 @@ buildKodiAddon rec { pname = "certifi"; namespace = "script.module.certifi"; - version = "2019.11.28+matrix.1"; + version = "2020.12.05+matrix.1"; src = fetchzip { url = "https://mirrors.kodi.tv/addons/matrix/${namespace}/${namespace}-${version}.zip"; - sha256 = "0vsd68izv1ix0hb1gm74qq3zff0sxmhfhjyh7y9005zzp2gpi62v"; + sha256 = "1z49b8va7wdyr714c8ixb2sldi0igffcjj3xpbmga58ph0z985vy"; }; passthru.updateScript = addonUpdateScript { diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/chardet/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/chardet/default.nix index 7c069592c6..cfe3d501cb 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/chardet/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/chardet/default.nix @@ -2,11 +2,11 @@ buildKodiAddon rec { pname = "chardet"; namespace = "script.module.chardet"; - version = "3.0.4+matrix.3"; + version = "4.0.0+matrix.1"; src = fetchzip { url = "https://mirrors.kodi.tv/addons/matrix/${namespace}/${namespace}-${version}.zip"; - sha256 = "05928dj4fsj2zg8ajdial3sdf8izddq64sr0al3zy1gqw91jp80f"; + sha256 = "1jsd165mb1b8jdan2jbjd3y3xa0xam2cxcccmwazkybpa0r6a7dj"; }; passthru.updateScript = addonUpdateScript { diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/idna/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/idna/default.nix index 662a45188e..c90f52ffdc 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/idna/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/idna/default.nix @@ -2,11 +2,11 @@ buildKodiAddon rec { pname = "idna"; namespace = "script.module.idna"; - version = "2.8.1+matrix.1"; + version = "2.10.0+matrix.1"; src = fetchzip { url = "https://mirrors.kodi.tv/addons/matrix/${namespace}/${namespace}-${version}.zip"; - sha256 = "02s75fhfmbs3a38wvxba51aj3lv5bidshjdkl6yjfji6waxpr9xh"; + sha256 = "0pm86m8kh2p0brps3xzxcmmabvb4izkglzkj8dsn33br3vlc7cm7"; }; passthru.updateScript = addonUpdateScript { diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/inputstream-adaptive/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/inputstream-adaptive/default.nix index 3ec8b19aed..e3cf4621ca 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/inputstream-adaptive/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/inputstream-adaptive/default.nix @@ -2,13 +2,13 @@ buildKodiBinaryAddon rec { pname = "inputstream-adaptive"; namespace = "inputstream.adaptive"; - version = "2.6.16"; + version = "2.6.17"; src = fetchFromGitHub { owner = "xbmc"; repo = "inputstream.adaptive"; rev = "${version}-${rel}"; - sha256 = "0c9cy284crmki2pmg9gvf443hrg13x1cr4vzd4yjsnpk6xpifad6"; + sha256 = "sha256-MHwLTSyMF7vYiVTof3xePW2eOySCr4/xYlPvWSzBZUg="; }; extraNativeBuildInputs = [ gtest ]; diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/inputstreamhelper/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/inputstreamhelper/default.nix index b42c32fed1..4ca45f8b7b 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/inputstreamhelper/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/inputstreamhelper/default.nix @@ -2,11 +2,11 @@ buildKodiAddon rec { pname = "inputstreamhelper"; namespace = "script.module.inputstreamhelper"; - version = "0.5.2+matrix.1"; + version = "0.5.5+matrix.1"; src = fetchzip { url = "https://mirrors.kodi.tv/addons/matrix/${namespace}/${namespace}-${version}.zip"; - sha256 = "18lkksljfa57w69yklbldf7dgyykrm84pd10mdjdqdm88fdiiijk"; + sha256 = "0y4xn3ygwv1kb7gya7iwdga0g9sa89snpnram0wwqzqn8wn2lyb4"; }; passthru.updateScript = addonUpdateScript { diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/jellyfin/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/jellyfin/default.nix index 03a037ce53..b162ca11fa 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/jellyfin/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/jellyfin/default.nix @@ -1,17 +1,17 @@ -{ lib, addonDir, buildKodiAddon, fetchFromGitHub, kodi, requests, dateutil, six, kodi-six, signals }: +{ lib, addonDir, buildKodiAddon, fetchFromGitHub, kodi, requests, dateutil, six, kodi-six, signals, websocket }: let python = kodi.pythonPackages.python.withPackages (p: with p; [ pyyaml ]); in buildKodiAddon rec { pname = "jellyfin"; namespace = "plugin.video.jellyfin"; - version = "0.7.1"; + version = "0.7.4"; src = fetchFromGitHub { owner = "jellyfin"; repo = "jellyfin-kodi"; rev = "v${version}"; - sha256 = "0fx20gmd5xlg59ks4433qh2b3jhbs5qrnc49zi4rkqqr4jr4nhnn"; + sha256 = "1ykgz1l2gmpdlsp3fbm31q8757879i9dd13svslqykvxadg69x03"; }; nativeBuildInputs = [ @@ -19,13 +19,13 @@ buildKodiAddon rec { ]; prePatch = '' - substituteInPlace .config/generate_xml.py \ - --replace "'jellyfin-kodi/release.yaml'" "'release.yaml'" \ - --replace "'jellyfin-kodi/addon.xml'" "'addon.xml'" + # ZIP does not support timestamps before 1980 - https://bugs.python.org/issue34097 + substituteInPlace build.py \ + --replace "with zipfile.ZipFile('{}/{}'.format(target, archive_name), 'w') as z:" "with zipfile.ZipFile('{}/{}'.format(target, archive_name), 'w', strict_timestamps=False) as z:" ''; buildPhase = '' - ${python}/bin/python3 .config/generate_xml.py py3 + ${python}/bin/python3 build.py --version=py3 ''; postInstall = '' @@ -38,6 +38,7 @@ buildKodiAddon rec { six kodi-six signals + websocket ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/netflix/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/netflix/default.nix index 1aac5f8e9b..20317b2682 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/netflix/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/netflix/default.nix @@ -3,13 +3,13 @@ buildKodiAddon rec { pname = "netflix"; namespace = "plugin.video.netflix"; - version = "1.15.1"; + version = "1.16.0"; src = fetchFromGitHub { owner = "CastagnaIT"; repo = namespace; rev = "v${version}"; - sha256 = "0c5cdi6s76vg2gyxzf0ylisxai1ii8vi6h4q4mznpfmplfdp667v"; + sha256 = "0k5jz6zjsazf0z2xv7gk848p4hvkzd79d0kl71a5d20f96g3938k"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/requests/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/requests/default.nix index 7d79abd087..0f2d5044f0 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/requests/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/requests/default.nix @@ -2,11 +2,11 @@ buildKodiAddon rec { pname = "requests"; namespace = "script.module.requests"; - version = "2.22.0+matrix.1"; + version = "2.25.1+matrix.1"; src = fetchzip { url = "https://mirrors.kodi.tv/addons/matrix/${namespace}/${namespace}-${version}.zip"; - sha256 = "09576galkyzhw8fhy2h4aablm5rm2v08g0mdmg9nn55dlxhkkljq"; + sha256 = "00qhykizvspzfwgl7qz9cyxrazs54jgin40g49v5nzmjq3qf62hb"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/six/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/six/default.nix index 8d7b8f936f..1742d1f6f0 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/six/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/six/default.nix @@ -3,11 +3,11 @@ buildKodiAddon rec { pname = "six"; namespace = "script.module.six"; - version = "1.14.0+matrix.2"; + version = "1.15.0+matrix.1"; src = fetchzip { url = "https://mirrors.kodi.tv/addons/matrix/${namespace}/${namespace}-${version}.zip"; - sha256 = "1f9g43j4y5x7b1bgbwqqfj0p2bkqjpycj17dj7a9j271mcr5zhwb"; + sha256 = "0c8vb0c4vhknkqqgvzj8l2ddgcm4iah0ca686slxbxbp800cydnf"; }; passthru.updateScript = addonUpdateScript { diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/urllib3/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/urllib3/default.nix index e3127a8d11..12d8e60d67 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/urllib3/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/urllib3/default.nix @@ -2,11 +2,11 @@ buildKodiAddon rec { pname = "urllib3"; namespace = "script.module.urllib3"; - version = "1.25.8+matrix.1"; + version = "1.26.4+matrix.1"; src = fetchzip { url = "https://mirrors.kodi.tv/addons/matrix/${namespace}/${namespace}-${version}.zip"; - sha256 = "080yq8ns0sag6rmdag1hjwi0whcmp35wzqjp3by92m81cpszs75q"; + sha256 = "1d2k6gbsnhdadcl1xc7igz4m71z2fcnpln5ppfjv455cmkk110vf"; }; passthru.updateScript = addonUpdateScript { diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/websocket/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/websocket/default.nix new file mode 100644 index 0000000000..3c83e1f9b0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/websocket/default.nix @@ -0,0 +1,27 @@ +{ lib, buildKodiAddon, fetchzip, addonUpdateScript, six, addonDir }: + +buildKodiAddon rec { + pname = "websocket"; + namespace = "script.module.websocket"; + version = "0.58.0+matrix.2"; + + src = fetchzip { + url = "https://mirrors.kodi.tv/addons/matrix/${namespace}/${namespace}-${version}.zip"; + sha256 = "0j2fcrn3hc6207g0k0gx5ypj4j3ww9pd7rnlzq1fgdig00laa8y7"; + }; + + propagatedBuildInputs = [ + six + ]; + + passthru.updateScript = addonUpdateScript { + attrPath = "kodi.packages.websocket"; + }; + + meta = with lib; { + homepage = "https://github.com/websocket-client/websocket-client"; + description = "A WebSocket client for Python"; + license = licenses.lgpl2Only; + maintainers = teams.kodi.members; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/youtube/default.nix b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/youtube/default.nix index c108aa36f9..65613658e0 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi-packages/youtube/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi-packages/youtube/default.nix @@ -3,11 +3,11 @@ buildKodiAddon rec { pname = "youtube"; namespace = "plugin.video.youtube"; - version = "6.8.10+matrix.1"; + version = "6.8.14+matrix.1"; src = fetchzip { url = "https://mirrors.kodi.tv/addons/matrix/${namespace}/${namespace}-${version}.zip"; - sha256 = "18z9zh6yqihnmfwd6cc4kpy2frzbarvhg8qpyc3w851ad053q7v0"; + sha256 = "1a18whh3fisprwipwhxf26kc958sxhwpvs8pxwq2sq96vr7b4xq7"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/video/kodi/unwrapped.nix b/third_party/nixpkgs/pkgs/applications/video/kodi/unwrapped.nix index ba35c24ecf..c31eb244c5 100644 --- a/third_party/nixpkgs/pkgs/applications/video/kodi/unwrapped.nix +++ b/third_party/nixpkgs/pkgs/applications/video/kodi/unwrapped.nix @@ -6,7 +6,7 @@ , openssl, gperf, tinyxml2, taglib, libssh, swig, jre_headless , gtest, ncurses, spdlog , libxml2, systemd -, alsaLib, libGLU, libGL, fontconfig, freetype, ftgl +, alsa-lib, libGLU, libGL, fontconfig, freetype, ftgl , libjpeg, libpng, libtiff , libmpeg2, libsamplerate, libmad , libogg, libvorbis, flac, libxslt @@ -114,7 +114,7 @@ in stdenv.mkDerivation { gettext pcre-cpp yajl fribidi libva libdrm openssl gperf tinyxml2 taglib libssh gtest ncurses spdlog - alsaLib libGL libGLU fontconfig freetype ftgl + alsa-lib libGL libGLU fontconfig freetype ftgl libjpeg libpng libtiff libmpeg2 libsamplerate libmad libogg libvorbis flac libxslt systemd diff --git a/third_party/nixpkgs/pkgs/applications/video/lightworks/default.nix b/third_party/nixpkgs/pkgs/applications/video/lightworks/default.nix index 81b5be75f3..352af7754c 100644 --- a/third_party/nixpkgs/pkgs/applications/video/lightworks/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/lightworks/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, dpkg, makeWrapper, buildFHSUserEnv , gtk3, gdk-pixbuf, cairo, libjpeg_original, glib, pango, libGLU -, libGL, nvidia_cg_toolkit, zlib, openssl, libuuid , alsaLib, udev, libjack2 +, libGL, nvidia_cg_toolkit, zlib, openssl, libuuid , alsa-lib, udev, libjack2 }: let fullPath = lib.makeLibraryPath [ @@ -17,7 +17,7 @@ let zlib openssl libuuid - alsaLib + alsa-lib libjack2 udev ]; diff --git a/third_party/nixpkgs/pkgs/applications/video/mplayer/default.nix b/third_party/nixpkgs/pkgs/applications/video/mplayer/default.nix index b6bfa9d0dc..1e439f57ef 100644 --- a/third_party/nixpkgs/pkgs/applications/video/mplayer/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/mplayer/default.nix @@ -5,7 +5,7 @@ , x11Support ? true, libX11 ? null, libXext ? null, libGLU, libGL ? null , xineramaSupport ? true, libXinerama ? null , xvSupport ? true, libXv ? null -, alsaSupport ? stdenv.isLinux, alsaLib ? null +, alsaSupport ? stdenv.isLinux, alsa-lib ? null , screenSaverSupport ? true, libXScrnSaver ? null , vdpauSupport ? false, libvdpau ? null , cddaSupport ? !stdenv.isDarwin, cdparanoia ? null @@ -36,7 +36,7 @@ assert fribidiSupport -> (fribidi != null); assert x11Support -> (libX11 != null && libXext != null && libGLU != null && libGL != null); assert xineramaSupport -> (libXinerama != null && x11Support); assert xvSupport -> (libXv != null && x11Support); -assert alsaSupport -> alsaLib != null; +assert alsaSupport -> alsa-lib != null; assert screenSaverSupport -> libXScrnSaver != null; assert vdpauSupport -> libvdpau != null; assert cddaSupport -> cdparanoia != null; @@ -116,7 +116,7 @@ stdenv.mkDerivation rec { ++ optional fontconfigSupport fontconfig ++ optional fribidiSupport fribidi ++ optionals x11Support [ libX11 libXext libGLU libGL ] - ++ optional alsaSupport alsaLib + ++ optional alsaSupport alsa-lib ++ optional xvSupport libXv ++ optional theoraSupport libtheora ++ optional cacaSupport libcaca @@ -205,6 +205,7 @@ stdenv.mkDerivation rec { optional fontconfigSupport "-lfontconfig" ++ optional fribidiSupport "-lfribidi" ++ optionals x11Support [ "-lX11" "-lXext" ] + ++ optional x264Support "-lx264" ++ [ "-lfreetype" ] ); diff --git a/third_party/nixpkgs/pkgs/applications/video/mpv/default.nix b/third_party/nixpkgs/pkgs/applications/video/mpv/default.nix index 99cb08a02a..3bde154305 100644 --- a/third_party/nixpkgs/pkgs/applications/video/mpv/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/mpv/default.nix @@ -30,7 +30,7 @@ , libdrm ? null , mesa ? null -, alsaSupport ? stdenv.isLinux, alsaLib ? null +, alsaSupport ? stdenv.isLinux, alsa-lib ? null , archiveSupport ? true, libarchive ? null , bluraySupport ? true, libbluray ? null , bs2bSupport ? true, libbs2b ? null @@ -61,7 +61,7 @@ with lib; let available = x: x != null; in -assert alsaSupport -> available alsaLib; +assert alsaSupport -> available alsa-lib; assert archiveSupport -> available libarchive; assert bluraySupport -> available libbluray; assert bs2bSupport -> available libbs2b; @@ -159,7 +159,7 @@ in stdenv.mkDerivation rec { buildInputs = [ ffmpeg freetype libass libpthreadstubs luaEnv libuchardet mujs - ] ++ optional alsaSupport alsaLib + ] ++ optional alsaSupport alsa-lib ++ optional archiveSupport libarchive ++ optional bluraySupport libbluray ++ optional bs2bSupport libbs2b diff --git a/third_party/nixpkgs/pkgs/applications/video/mpv/scripts/youtube-quality.nix b/third_party/nixpkgs/pkgs/applications/video/mpv/scripts/youtube-quality.nix index 3c55a36d0a..5301e4232a 100644 --- a/third_party/nixpkgs/pkgs/applications/video/mpv/scripts/youtube-quality.nix +++ b/third_party/nixpkgs/pkgs/applications/video/mpv/scripts/youtube-quality.nix @@ -5,7 +5,7 @@ }: stdenvNoCC.mkDerivation rec { - pname = "mpv-playlistmanager"; + pname = "mpv-youtube-quality"; version = "unstable-2020-02-11"; src = fetchFromGitHub { diff --git a/third_party/nixpkgs/pkgs/applications/video/mythtv/default.nix b/third_party/nixpkgs/pkgs/applications/video/mythtv/default.nix index 236aec2ee5..cf307f0da3 100644 --- a/third_party/nixpkgs/pkgs/applications/video/mythtv/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/mythtv/default.nix @@ -1,5 +1,5 @@ { lib, mkDerivation, fetchFromGitHub, which, qtbase, qtwebkit, qtscript, xlibsWrapper -, libpulseaudio, fftwSinglePrec , lame, zlib, libGLU, libGL, alsaLib, freetype +, libpulseaudio, fftwSinglePrec , lame, zlib, libGLU, libGL, alsa-lib, freetype , perl, pkg-config , libsamplerate, libbluray, lzo, libX11, libXv, libXrandr, libXvMC, libXinerama, libXxf86vm , libXmu , yasm, libuuid, taglib, libtool, autoconf, automake, file, exiv2, linuxHeaders }: @@ -24,7 +24,7 @@ mkDerivation rec { buildInputs = [ freetype qtbase qtwebkit qtscript lame zlib xlibsWrapper libGLU libGL - perl libsamplerate libbluray lzo alsaLib libpulseaudio fftwSinglePrec libX11 libXv libXrandr libXvMC + perl libsamplerate libbluray lzo alsa-lib libpulseaudio fftwSinglePrec libX11 libXv libXrandr libXvMC libXmu libXinerama libXxf86vm libXmu libuuid taglib exiv2 ]; nativeBuildInputs = [ pkg-config which yasm libtool autoconf automake file ]; diff --git a/third_party/nixpkgs/pkgs/applications/video/natron/default.nix b/third_party/nixpkgs/pkgs/applications/video/natron/default.nix index bbbcf3d768..ea8a801d19 100644 --- a/third_party/nixpkgs/pkgs/applications/video/natron/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/natron/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, qt4, pkg-config, boost, expat, cairo, python2Packages, cmake, flex, bison, pango, librsvg, librevenge, libxml2, libcdr, libzip, - poppler, imagemagick, openexr, ffmpeg_3, opencolorio, openimageio, + poppler, imagemagick, openexr, ffmpeg_3, opencolorio_1, openimageio, qmake4Hook, libpng, libGL, lndir, libraw, openjpeg, libwebp, fetchFromGitHub }: let @@ -58,7 +58,7 @@ let sha256 = "tUb6myG03mRieUAfgRZfv5Ap+cLvbpNrLMYCGTiAq8c="; nativeBuildInputs = [ pkg-config ]; buildInputs = [ - pango librsvg librevenge libcdr opencolorio libxml2 libzip + pango librsvg librevenge libcdr opencolorio_1 libxml2 libzip poppler imagemagick ]; preConfigure = '' @@ -74,7 +74,7 @@ let sha256 = "OQg6a5wNy9TFFySjmgd1subvXRxY/ZnSOCkaoUo+ZaA="; nativeBuildInputs = [ pkg-config ]; buildInputs = [ - libpng ffmpeg_3 openexr opencolorio openimageio boost libGL + libpng ffmpeg_3 openexr opencolorio_1 openimageio boost libGL seexpr libraw openjpeg libwebp ]; }) diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/rename-obs-move-transition-cmake.patch b/third_party/nixpkgs/pkgs/applications/video/obs-studio/0001-Use-FindLibobs.cmake.patch similarity index 88% rename from third_party/nixpkgs/pkgs/applications/video/obs-studio/rename-obs-move-transition-cmake.patch rename to third_party/nixpkgs/pkgs/applications/video/obs-studio/0001-Use-FindLibobs.cmake.patch index ed6df1d565..db7d5b4b31 100644 --- a/third_party/nixpkgs/pkgs/applications/video/obs-studio/rename-obs-move-transition-cmake.patch +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/0001-Use-FindLibobs.cmake.patch @@ -1,5 +1,5 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt -index d116619..a1366ce 100644 +index f6d8fa3..5f0657d 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -1,6 +1,17 @@ @@ -7,7 +7,7 @@ index d116619..a1366ce 100644 + cmake_policy(SET CMP0048 NEW) +endif (POLICY CMP0048) + - project(move-transition VERSION 2.3.0) + project(move-transition VERSION 2.4.3) set(PROJECT_FULL_NAME "Move Transition") +include(FindLibobs.cmake) @@ -18,9 +18,8 @@ index d116619..a1366ce 100644 + "${LIBOBS_INCLUDE_DIR}/../UI/obs-frontend-api") + configure_file(${CMAKE_CURRENT_SOURCE_DIR}/version.h.in ${CMAKE_CURRENT_SOURCE_DIR}/version.h) - set(move-transition_HEADERS -@@ -34,4 +45,10 @@ target_link_libraries(move-transition +@@ -38,4 +49,10 @@ target_link_libraries(move-transition libobs) set_target_properties(move-transition PROPERTIES FOLDER "plugins/exeldro") diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/Change-product_version-to-user_agent_product.patch b/third_party/nixpkgs/pkgs/applications/video/obs-studio/Change-product_version-to-user_agent_product.patch new file mode 100644 index 0000000000..0bc7962486 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/Change-product_version-to-user_agent_product.patch @@ -0,0 +1,26 @@ +From 635772c4c5ecf11a0f84e6c9fc273dce6b9a5688 Mon Sep 17 00:00:00 2001 +From: V +Date: Thu, 10 Jun 2021 18:36:22 +0200 +Subject: [PATCH] Change product_version to user_agent_product + +This is its name as of CEF 91.1.0. +--- + obs-browser-plugin.cpp | 2 +- + 1 file changed, 1 insertion(+), 1 deletion(-) + +diff --git a/obs-browser-plugin.cpp b/obs-browser-plugin.cpp +index 1a6a009..5eb379e 100644 +--- a/plugins/obs-browser/obs-browser-plugin.cpp ++++ b/plugins/obs-browser/obs-browser-plugin.cpp +@@ -298,7 +298,7 @@ static void BrowserInit(void) + prod_ver << std::to_string(obs_maj) << "." << std::to_string(obs_min) + << "." << std::to_string(obs_pat); + +- CefString(&settings.product_version) = prod_ver.str(); ++ CefString(&settings.user_agent_product) = prod_ver.str(); + + #ifdef USE_QT_LOOP + settings.external_message_pump = true; +-- +2.31.1 + diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/Enable-file-access-and-universal-access-for-file-URL.patch b/third_party/nixpkgs/pkgs/applications/video/obs-studio/Enable-file-access-and-universal-access-for-file-URL.patch new file mode 100644 index 0000000000..49d01bacbd --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/Enable-file-access-and-universal-access-for-file-URL.patch @@ -0,0 +1,36 @@ +From 0de0a90f8fe5e1e48fa4ec7aa7c825ef88770f9d Mon Sep 17 00:00:00 2001 +From: Ryan Foster +Date: Mon, 9 Sep 2019 23:55:02 -0400 +Subject: [PATCH] Enable file access and universal access for file URLs + +When loading a local file, instead of disabling CEF's web security, +enable file access and universal access for file URLs. This should allow +local files to make CORS requests without completely disabling CEF's +security model. +--- + obs-browser-source.cpp | 9 ++++++--- + 1 file changed, 6 insertions(+), 3 deletions(-) + +diff --git a/obs-browser-source.cpp b/obs-browser-source.cpp +index ab1181e..c775283 100644 +--- a/plugins/obs-browser/obs-browser-source.cpp ++++ b/plugins/obs-browser/obs-browser-source.cpp +@@ -179,9 +179,12 @@ bool BrowserSource::CreateBrowser() + + #if ENABLE_LOCAL_FILE_URL_SCHEME + if (is_local) { +- /* Disable web security for file:// URLs to allow +- * local content access to remote APIs */ +- cefBrowserSettings.web_security = STATE_DISABLED; ++ /* Enable file access and universal access from file:// ++ * URLs to allow local content access to remote APIs */ ++ cefBrowserSettings.file_access_from_file_urls = ++ STATE_ENABLED; ++ cefBrowserSettings.universal_access_from_file_urls = ++ STATE_ENABLED; + } + #endif + +-- +2.31.1 + diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/default.nix b/third_party/nixpkgs/pkgs/applications/video/obs-studio/default.nix index 109744969c..d7784279c3 100644 --- a/third_party/nixpkgs/pkgs/applications/video/obs-studio/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/default.nix @@ -30,7 +30,7 @@ , python3 , alsaSupport ? stdenv.isLinux -, alsaLib +, alsa-lib , pulseaudioSupport ? config.pulseaudio or stdenv.isLinux , libpulseaudio , libcef @@ -53,6 +53,14 @@ in mkDerivation rec { fetchSubmodules = true; }; + patches = [ + # Lets obs-browser build against CEF 90.1.0+ + ./Enable-file-access-and-universal-access-for-file-URL.patch + + # Lets obs-browser build against CEF 91.1.0+ + ./Change-product_version-to-user_agent_product.patch + ]; + nativeBuildInputs = [ addOpenGLRunpath cmake pkg-config ]; buildInputs = [ @@ -77,7 +85,7 @@ in mkDerivation rec { mbedtls ] ++ optionals scriptingSupport [ luajit swig python3 ] - ++ optional alsaSupport alsaLib + ++ optional alsaSupport alsa-lib ++ optional pulseaudioSupport libpulseaudio ++ optional pipewireSupport pipewire; @@ -106,13 +114,13 @@ in mkDerivation rec { ]; postInstall = '' - wrapProgram $out/bin/obs \ - --prefix "LD_LIBRARY_PATH" : "${xorg.libX11.out}/lib:${libvlc}/lib" + wrapProgram $out/bin/obs \ + --prefix "LD_LIBRARY_PATH" : "${xorg.libX11.out}/lib:${libvlc}/lib" ''; postFixup = lib.optionalString stdenv.isLinux '' - addOpenGLRunpath $out/lib/lib*.so - addOpenGLRunpath $out/lib/obs-plugins/*.so + addOpenGLRunpath $out/lib/lib*.so + addOpenGLRunpath $out/lib/obs-plugins/*.so ''; meta = with lib; { @@ -123,7 +131,7 @@ in mkDerivation rec { video content, efficiently ''; homepage = "https://obsproject.com"; - maintainers = with maintainers; [ jb55 MP2E ]; + maintainers = with maintainers; [ jb55 MP2E V ]; license = licenses.gpl2; platforms = [ "x86_64-linux" "i686-linux" ]; }; diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/default.nix b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/default.nix new file mode 100644 index 0000000000..477f0efa3e --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/default.nix @@ -0,0 +1,9 @@ +{ callPackage, libsForQt5 }: + +{ + obs-gstreamer = callPackage ./obs-gstreamer.nix {}; + obs-move-transition = callPackage ./obs-move-transition.nix {}; + obs-multi-rtmp = libsForQt5.callPackage ./obs-multi-rtmp.nix {}; + obs-ndi = libsForQt5.callPackage ./obs-ndi.nix {}; + wlrobs = callPackage ./wlrobs.nix {}; +} diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/fix-search-path.patch b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/fix-search-path.patch similarity index 100% rename from third_party/nixpkgs/pkgs/applications/video/obs-studio/fix-search-path.patch rename to third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/fix-search-path.patch diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/hardcode-ndi-path.patch b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/hardcode-ndi-path.patch similarity index 100% rename from third_party/nixpkgs/pkgs/applications/video/obs-studio/hardcode-ndi-path.patch rename to third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/hardcode-ndi-path.patch diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-gstreamer.nix b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-gstreamer.nix similarity index 57% rename from third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-gstreamer.nix rename to third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-gstreamer.nix index e32ec7575b..d21d78c42b 100644 --- a/third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-gstreamer.nix +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-gstreamer.nix @@ -22,18 +22,6 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config meson ninja ]; buildInputs = [ gst_all_1.gstreamermm obs-studio ]; - # obs-studio expects the shared object to be located in bin/32bit or bin/64bit - # https://github.com/obsproject/obs-studio/blob/d60c736cb0ec0491013293c8a483d3a6573165cb/libobs/obs-nix.c#L48 - postInstall = let - pluginPath = { - i686-linux = "bin/32bit"; - x86_64-linux = "bin/64bit"; - }.${stdenv.targetPlatform.system} or (throw "Unsupported system: ${stdenv.targetPlatform.system}"); - in '' - mkdir -p $out/share/obs/obs-plugins/obs-gstreamer/${pluginPath} - ln -s $out/lib/obs-plugins/obs-gstreamer.so $out/share/obs/obs-plugins/obs-gstreamer/${pluginPath} - ''; - meta = with lib; { description = "An OBS Studio source, encoder and video filter plugin to use GStreamer elements/pipelines in OBS Studio"; homepage = "https://github.com/fswoch/obs-gstreamer"; diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-move-transition.nix b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-move-transition.nix similarity index 64% rename from third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-move-transition.nix rename to third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-move-transition.nix index 9a896c7320..90a0a56971 100644 --- a/third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-move-transition.nix +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-move-transition.nix @@ -9,13 +9,13 @@ stdenv.mkDerivation rec { pname = "obs-move-transition"; - version = "2.3.0"; + version = "2.4.3"; src = fetchFromGitHub { owner = "exeldro"; repo = "obs-move-transition"; rev = version; - sha256 = "0cl6z3cvdjmbisvfcy281pcg6rhxmyfs31rwv7q4x39352rcs1nw"; + sha256 = "sha256-/6PcNLOnBBqLZHVKMg1tdX9OktcllEEqnL93nXpuXL0="; }; nativeBuildInputs = [ cmake ]; @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { cp ${obs-studio.src}/cmake/external/FindLibobs.cmake FindLibobs.cmake ''; - patches = [ ./rename-obs-move-transition-cmake.patch ]; + patches = [ ./0001-Use-FindLibobs.cmake.patch ]; postPatch = '' substituteInPlace move-source-filter.c --replace '<../UI/obs-frontend-api/obs-frontend-api.h>' '' @@ -39,18 +39,6 @@ stdenv.mkDerivation rec { substituteInPlace audio-move.c --replace '<../UI/obs-frontend-api/obs-frontend-api.h>' '' ''; - # obs-studio expects the shared object to be located in bin/32bit or bin/64bit - # https://github.com/obsproject/obs-studio/blob/d60c736cb0ec0491013293c8a483d3a6573165cb/libobs/obs-nix.c#L48 - postInstall = let - pluginPath = { - i686-linux = "bin/32bit"; - x86_64-linux = "bin/64bit"; - }.${stdenv.targetPlatform.system} or (throw "Unsupported system: ${stdenv.targetPlatform.system}"); - in '' - mkdir -p $out/share/obs/obs-plugins/move-transition/${pluginPath} - ln -s $out/lib/obs-plugins/move-transition.so $out/share/obs/obs-plugins/move-transition/${pluginPath} - ''; - meta = with lib; { description = "Plugin for OBS Studio to move source to a new position during scene transition"; homepage = "https://github.com/exeldro/obs-move-transition"; diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-multi-rtmp.nix b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-multi-rtmp.nix similarity index 59% rename from third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-multi-rtmp.nix rename to third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-multi-rtmp.nix index f716d93a36..0122cba0f3 100644 --- a/third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-multi-rtmp.nix +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-multi-rtmp.nix @@ -20,18 +20,6 @@ stdenv.mkDerivation rec { dontWrapQtApps = true; - # obs-studio expects the shared object to be located in bin/32bit or bin/64bit - # https://github.com/obsproject/obs-studio/blob/d60c736cb0ec0491013293c8a483d3a6573165cb/libobs/obs-nix.c#L48 - postInstall = let - pluginPath = { - i686-linux = "bin/32bit"; - x86_64-linux = "bin/64bit"; - }.${stdenv.targetPlatform.system} or (throw "Unsupported system: ${stdenv.targetPlatform.system}"); - in '' - mkdir -p $out/share/obs/obs-plugins/obs-multi-rtmp/${pluginPath} - ln -s $out/lib/obs-plugins/obs-multi-rtmp.so $out/share/obs/obs-plugins/obs-multi-rtmp/${pluginPath} - ''; - meta = with lib; { homepage = "https://github.com/sorayuki/obs-multi-rtmp/"; changelog = "https://github.com/sorayuki/obs-multi-rtmp/releases/tag/${version}"; diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-ndi.nix b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-ndi.nix similarity index 77% rename from third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-ndi.nix rename to third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-ndi.nix index b35398d65b..1e2abb45a5 100644 --- a/third_party/nixpkgs/pkgs/applications/video/obs-studio/obs-ndi.nix +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/obs-ndi.nix @@ -1,10 +1,3 @@ -# We don't have a wrapper which can supply obs-studio plugins so you have to -# somewhat manually install this: - -# nix-env -f "" -iA obs-ndi -# mkdir -p ~/.config/obs-studio/plugins/bin -# ln -s ~/.nix-profile/lib/obs-plugins/obs-ndi.so ~/.config/obs-studio/plugins/bin/ - { lib, stdenv, fetchFromGitHub, obs-studio, cmake, qtbase, ndi }: stdenv.mkDerivation rec { diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/wlrobs.nix b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/wlrobs.nix new file mode 100644 index 0000000000..adae03036f --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/plugins/wlrobs.nix @@ -0,0 +1,26 @@ +{ lib, stdenv, fetchhg +, meson, pkg-config, ninja +, wayland, obs-studio, libX11 +}: + +stdenv.mkDerivation { + pname = "wlrobs"; + version = "unstable-2021-05-13"; + + src = fetchhg { + url = "https://hg.sr.ht/~scoopta/wlrobs"; + rev = "4184a4a8ea7dc054c993efa16007f3a75b2c6f51"; + sha256 = "146xirzd3nw1sd216y406v1riky9k08b6a0j4kwxrif5zyqa3adc"; + }; + + nativeBuildInputs = [ meson pkg-config ninja ]; + buildInputs = [ wayland obs-studio libX11 ]; + + meta = with lib; { + description = "An obs-studio plugin that allows you to screen capture on wlroots based wayland compositors"; + homepage = "https://hg.sr.ht/~scoopta/wlrobs"; + maintainers = with maintainers; [ grahamc V ]; + license = licenses.gpl3Plus; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/v4l2sink.nix b/third_party/nixpkgs/pkgs/applications/video/obs-studio/v4l2sink.nix deleted file mode 100644 index 2716120682..0000000000 --- a/third_party/nixpkgs/pkgs/applications/video/obs-studio/v4l2sink.nix +++ /dev/null @@ -1,57 +0,0 @@ -{ lib -, stdenv -, fetchFromGitHub -, fetchpatch -, cmake -, qtbase -, obs-studio -}: - -stdenv.mkDerivation rec { - pname = "obs-v4l2sink"; - version = "0.1.0-12-g1ec3c8a"; - - src = fetchFromGitHub { - owner = "CatxFish"; - repo = "obs-v4l2sink"; - rev = version; - sha256 = "03ah91cm1qz26k90mfx51l0d598i9bcmw39lkikjs1msm4c9dfxx"; - }; - - nativeBuildInputs = [ cmake ]; - buildInputs = [ qtbase obs-studio ]; - - dontWrapQtApps = true; - - patches = [ - # Fixes the segfault when stopping the plugin - (fetchpatch { - url = "https://github.com/CatxFish/obs-v4l2sink/commit/6604f01796d1b84a95714730ea51a6b8ac0e450b.diff"; - sha256 = "0crcvw02dj0aqy7hnhizjdsnhiw03zmg6cbdkasxz2mrrbyc3s88"; - }) - ]; - - cmakeFlags = with lib; [ - "-DLIBOBS_INCLUDE_DIR=${obs-studio.src}/libobs" - ]; - - # obs-studio expects the shared object to be located in bin/32bit or bin/64bit - # https://github.com/obsproject/obs-studio/blob/d60c736cb0ec0491013293c8a483d3a6573165cb/libobs/obs-nix.c#L48 - postInstall = let - pluginPath = { - i686-linux = "bin/32bit"; - x86_64-linux = "bin/64bit"; - }.${stdenv.targetPlatform.system} or (throw "Unsupported system: ${stdenv.targetPlatform.system}"); - in '' - mkdir -p $out/share/obs/obs-plugins/v4l2sink/${pluginPath} - ln -s $out/lib/obs-plugins/v4l2sink.so $out/share/obs/obs-plugins/v4l2sink/${pluginPath} - ''; - - meta = with lib; { - description = "obs studio output plugin for Video4Linux2 device"; - homepage = "https://github.com/CatxFish/obs-v4l2sink"; - maintainers = with maintainers; [ colemickens peelz ]; - license = licenses.gpl2; - platforms = [ "x86_64-linux" "i686-linux" ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/wlrobs.nix b/third_party/nixpkgs/pkgs/applications/video/obs-studio/wlrobs.nix deleted file mode 100644 index 47f6ea9e5d..0000000000 --- a/third_party/nixpkgs/pkgs/applications/video/obs-studio/wlrobs.nix +++ /dev/null @@ -1,42 +0,0 @@ -# (the following is somewhat lifted from ./linuxbrowser.nix) -# We don't have a wrapper which can supply obs-studio plugins so you have to -# somewhat manually install this: - -# nix-env -f . -iA obs-wlrobs -# mkdir -p ~/.config/obs-studio/plugins/wlrobs/bin/64bit -# ln -s ~/.nix-profile/share/obs/obs-plugins/wlrobs/bin/64bit/libwlrobs.so ~/.config/obs-studio/plugins/wlrobs/bin/64bit -{ stdenv, fetchhg, wayland, obs-studio -, meson, ninja, pkg-config, libX11 -, dmabufSupport ? false, libdrm ? null, libGL ? null, lib}: - -assert dmabufSupport -> libdrm != null && libGL != null; - -stdenv.mkDerivation { - pname = "obs-wlrobs"; - version = "20200622"; - - src = fetchhg { - url = "https://hg.sr.ht/~scoopta/wlrobs"; - rev = "1d3acaaf64049da3da9721aa8b9b47582fe0081b"; - sha256 = "0qrcf8024r4ynfjw0zx8vn59ygx9q5rb196s6nyxmy3gkv2lfxlq"; - }; - - buildInputs = [ libX11 libGL libdrm meson ninja pkg-config wayland obs-studio ]; - - installPhase = '' - mkdir -p $out/share/obs/obs-plugins/wlrobs/bin/64bit - cp ./libwlrobs.so $out/share/obs/obs-plugins/wlrobs/bin/64bit/ - ''; - - mesonFlags = [ - "-Duse_dmabuf=${lib.boolToString dmabufSupport}" - ]; - - meta = with lib; { - description = "An obs-studio plugin that allows you to screen capture on wlroots based wayland compositors"; - homepage = "https://hg.sr.ht/~scoopta/wlrobs"; - maintainers = with maintainers; [ grahamc ]; - license = licenses.gpl3; - platforms = [ "x86_64-linux" ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/applications/video/obs-studio/wrapper.nix b/third_party/nixpkgs/pkgs/applications/video/obs-studio/wrapper.nix new file mode 100644 index 0000000000..3871151bbb --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/video/obs-studio/wrapper.nix @@ -0,0 +1,21 @@ +{ obs-studio, symlinkJoin, makeWrapper }: + +{ plugins ? [] }: + +symlinkJoin { + name = "wrapped-${obs-studio.name}"; + + nativeBuildInputs = [ makeWrapper ]; + paths = [ obs-studio ] ++ plugins; + + postBuild = '' + wrapProgram $out/bin/obs \ + --set OBS_PLUGINS_PATH "$out/lib/obs-plugins" \ + --set OBS_PLUGINS_DATA_PATH "$out/share/obs/obs-plugins" + ''; + + inherit (obs-studio) meta; + passthru = obs-studio.passthru // { + passthru.unwrapped = obs-studio; + }; +} diff --git a/third_party/nixpkgs/pkgs/applications/video/olive-editor/default.nix b/third_party/nixpkgs/pkgs/applications/video/olive-editor/default.nix index 7bacf4138c..c63011eebc 100644 --- a/third_party/nixpkgs/pkgs/applications/video/olive-editor/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/olive-editor/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, pkg-config, which, qmake, mkDerivation, - qtmultimedia, wrapQtAppsHook, frei0r, opencolorio, ffmpeg-full, + qtmultimedia, wrapQtAppsHook, frei0r, opencolorio_1, ffmpeg-full, CoreFoundation }: mkDerivation rec { @@ -23,7 +23,7 @@ mkDerivation rec { buildInputs = [ ffmpeg-full frei0r - opencolorio + opencolorio_1 qtmultimedia ] ++ lib.optional stdenv.isDarwin CoreFoundation; diff --git a/third_party/nixpkgs/pkgs/applications/video/openshot-qt/libopenshot-audio.nix b/third_party/nixpkgs/pkgs/applications/video/openshot-qt/libopenshot-audio.nix index 84f5ac56e7..c3bcc09cd3 100644 --- a/third_party/nixpkgs/pkgs/applications/video/openshot-qt/libopenshot-audio.nix +++ b/third_party/nixpkgs/pkgs/applications/video/openshot-qt/libopenshot-audio.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, pkg-config, cmake, doxygen -, alsaLib, libX11, libXft, libXrandr, libXinerama, libXext, libXcursor +, alsa-lib, libX11, libXft, libXrandr, libXinerama, libXext, libXcursor , zlib, AGL, Cocoa, Foundation }: @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { [ pkg-config cmake doxygen ]; buildInputs = - optionals stdenv.isLinux [ alsaLib ] + optionals stdenv.isLinux [ alsa-lib ] ++ (if stdenv.isDarwin then [ zlib AGL Cocoa Foundation ] else diff --git a/third_party/nixpkgs/pkgs/applications/video/plex-media-player/default.nix b/third_party/nixpkgs/pkgs/applications/video/plex-media-player/default.nix index e7a735f167..81b354fe1f 100644 --- a/third_party/nixpkgs/pkgs/applications/video/plex-media-player/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/plex-media-player/default.nix @@ -11,14 +11,14 @@ let depSrcs = import ./deps.nix { inherit fetchurl; }; in mkDerivation rec { pname = "plex-media-player"; - version = "2.58.0.1076"; - vsnHash = "38e019da"; + version = "2.58.1"; + vsnHash = "ae73e074"; src = fetchFromGitHub { owner = "plexinc"; repo = "plex-media-player"; rev = "v${version}-${vsnHash}"; - sha256 = "XFwcSHn9wG30bDMGFITBmhp6/VI1RLmxMxFFxjntTmw="; + sha256 = "1q20fdp5d0blb0q6p2357bwdc2g65cadkgdp4w533ij2nyaxydjd"; }; nativeBuildInputs = [ pkg-config cmake python3 ]; diff --git a/third_party/nixpkgs/pkgs/applications/video/plex-media-player/deps.nix b/third_party/nixpkgs/pkgs/applications/video/plex-media-player/deps.nix index fddbae9375..cfb74c2d48 100644 --- a/third_party/nixpkgs/pkgs/applications/video/plex-media-player/deps.nix +++ b/third_party/nixpkgs/pkgs/applications/video/plex-media-player/deps.nix @@ -7,22 +7,22 @@ rec { webClient = fetchurl { url = "https://artifacts.plex.tv/web-client-pmp/${webClientBuildId}/buildid.cmake"; - sha256 = "AzHlO7Z8SxQoT6++OphwDDQ47Ombnpaby0mh1YNnSvc="; + sha256 = "1xsacy1xb8a9rfdrd7lvx7n3hd0cf2c3mgmg9wl18jvwnqxyac83"; }; webClientDesktopHash = fetchurl { url = "https://artifacts.plex.tv/web-client-pmp/${webClientBuildId}/web-client-desktop-${webClientDesktopBuildId}.tar.xz.sha1"; - sha256 = "7vUcTuN5ypFFIrBygyutEZu4MYl5WPmFureQl6HvVx8="; + sha256 = "07spxyhrg45ppa2zjn3ri4qvi6qimlmq6wmh492r3jkrwd71rxgf"; }; webClientDesktop = fetchurl { url = "https://artifacts.plex.tv/web-client-pmp/${webClientBuildId}/web-client-desktop-${webClientDesktopBuildId}.tar.xz"; - sha256 = "xWwXhN2N4Pvalxtm5PwZprkcFU6RIiE6fA71d2E6lP4="; + sha256 = "1zll79hpgx8fghx228li9qairfd637yf8rhvjzdgpq4dvn21fv65"; }; webClientTvHash = fetchurl { url = "https://artifacts.plex.tv/web-client-pmp/${webClientBuildId}/web-client-tv-${webClientTvBuildId}.tar.xz.sha1"; - sha256 = "U8u5SOxPpz8HOJKrYXlIHx0X08Flspl67hlzc57g7v8="; + sha256 = "1zzfw2g76wqrxrx9kck5q79if78z91wn3awj703kz9sgxi4bkjsk"; }; webClientTv = fetchurl { url = "https://artifacts.plex.tv/web-client-pmp/${webClientBuildId}/web-client-tv-${webClientTvBuildId}.tar.xz"; - sha256 = "4Et9d4BO+4UParvsSJglJvb+cnp0oUP3O4MDNnLeP7g="; + sha256 = "1f1zvrr3c0w37gvl78blg9rgxxi64nc4iv5vd87qbysfh1vpsjz0"; }; } diff --git a/third_party/nixpkgs/pkgs/applications/video/plex-mpv-shim/default.nix b/third_party/nixpkgs/pkgs/applications/video/plex-mpv-shim/default.nix index d0904790a9..d1b88da37f 100644 --- a/third_party/nixpkgs/pkgs/applications/video/plex-mpv-shim/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/plex-mpv-shim/default.nix @@ -2,13 +2,13 @@ buildPythonApplication rec { pname = "plex-mpv-shim"; - version = "1.9.0"; + version = "1.10.0"; src = fetchFromGitHub { owner = "iwalton3"; repo = pname; rev = "v${version}"; - sha256 = "06i6pp4jg0f9h6ash60fj1l5mbsdw3zyx7c6anbsrn86802i7paa"; + sha256 = "18bd2nvlwzkmadimlkh7rs8rnp0ppfx1dzkxb11dq84pdpbl25pc"; }; propagatedBuildInputs = [ mpv requests python-mpv-jsonipc ]; diff --git a/third_party/nixpkgs/pkgs/applications/video/qmplay2/default.nix b/third_party/nixpkgs/pkgs/applications/video/qmplay2/default.nix index ecedd73009..0e0580b9f2 100644 --- a/third_party/nixpkgs/pkgs/applications/video/qmplay2/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/qmplay2/default.nix @@ -2,7 +2,7 @@ , fetchFromGitHub , pkg-config , cmake -, alsaLib +, alsa-lib , ffmpeg , libass , libcddb @@ -36,7 +36,7 @@ in stdenv.mkDerivation { nativeBuildInputs = [ cmake pkg-config wrapQtAppsHook ]; buildInputs = [ - alsaLib + alsa-lib ffmpeg libass libcddb diff --git a/third_party/nixpkgs/pkgs/applications/video/simplescreenrecorder/default.nix b/third_party/nixpkgs/pkgs/applications/video/simplescreenrecorder/default.nix index 14575a88dc..34842b3874 100644 --- a/third_party/nixpkgs/pkgs/applications/video/simplescreenrecorder/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/simplescreenrecorder/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, mkDerivation, fetchFromGitHub, alsaLib, ffmpeg, libjack2, libX11, libXext, libXinerama, qtx11extras +{ lib, stdenv, mkDerivation, fetchFromGitHub, alsa-lib, ffmpeg, libjack2, libX11, libXext, libXinerama, qtx11extras , libXfixes, libGLU, libGL, pkg-config, libpulseaudio, libv4l, qtbase, qttools, cmake, ninja }: @@ -27,7 +27,7 @@ mkDerivation rec { nativeBuildInputs = [ pkg-config cmake ninja ]; buildInputs = [ - alsaLib ffmpeg libjack2 libX11 libXext libXfixes libXinerama libGLU libGL + alsa-lib ffmpeg libjack2 libX11 libXext libXfixes libXinerama libGLU libGL libpulseaudio libv4l qtbase qttools qtx11extras ]; diff --git a/third_party/nixpkgs/pkgs/applications/video/streamlink-twitch-gui/bin.nix b/third_party/nixpkgs/pkgs/applications/video/streamlink-twitch-gui/bin.nix index 4d90e6327b..32a35eca92 100644 --- a/third_party/nixpkgs/pkgs/applications/video/streamlink-twitch-gui/bin.nix +++ b/third_party/nixpkgs/pkgs/applications/video/streamlink-twitch-gui/bin.nix @@ -7,7 +7,7 @@ , wrapGAppsHook , at-spi2-core , atk -, alsaLib +, alsa-lib , cairo , cups , dbus @@ -53,7 +53,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = with xorg; [ at-spi2-core atk - alsaLib + alsa-lib autoPatchelfHook cairo cups.lib diff --git a/third_party/nixpkgs/pkgs/applications/video/streamlink/default.nix b/third_party/nixpkgs/pkgs/applications/video/streamlink/default.nix index 94bd0877a7..d7ade6899d 100644 --- a/third_party/nixpkgs/pkgs/applications/video/streamlink/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/streamlink/default.nix @@ -28,7 +28,7 @@ python3.pkgs.buildPythonApplication rec { requests iso-639 iso3166 - websocket_client + websocket-client isodate ]) ++ [ rtmpdump diff --git a/third_party/nixpkgs/pkgs/applications/video/vdr/plugins.nix b/third_party/nixpkgs/pkgs/applications/video/vdr/plugins.nix index 395de891eb..cb2338c0e1 100644 --- a/third_party/nixpkgs/pkgs/applications/video/vdr/plugins.nix +++ b/third_party/nixpkgs/pkgs/applications/video/vdr/plugins.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, fetchgit, vdr, alsaLib, fetchFromGitHub +{ lib, stdenv, fetchurl, fetchgit, vdr, alsa-lib, fetchFromGitHub , libvdpau, libxcb, xcbutilwm, graphicsmagick, libav, pcre, xorgserver, ffmpeg_3 , libiconv, boost, libgcrypt, perl, util-linux, groff, libva, xorg, ncurses , callPackage @@ -54,7 +54,7 @@ in { buildInputs = [ vdr libxcb xcbutilwm ffmpeg_3 - alsaLib + alsa-lib libvdpau # vdpau libva # va-api ] ++ (with xorg; [ libxcb libX11 ]); diff --git a/third_party/nixpkgs/pkgs/applications/video/vlc/default.nix b/third_party/nixpkgs/pkgs/applications/video/vlc/default.nix index adb7ba970e..ed59761513 100644 --- a/third_party/nixpkgs/pkgs/applications/video/vlc/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/vlc/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, autoreconfHook , libarchive, perl, xorg, libdvdnav, libbluray -, zlib, a52dec, libmad, faad2, ffmpeg, alsaLib +, zlib, a52dec, libmad, faad2, ffmpeg, alsa-lib , pkg-config, dbus, fribidi, freefont_ttf, libebml, libmatroska , libvorbis, libtheora, speex, lua5, libgcrypt, libgpgerror, libupnp , libcaca, libpulseaudio, flac, schroedinger, libxml2, librsvg @@ -35,7 +35,7 @@ stdenv.mkDerivation rec { # which are not included here for no other reason that nobody has mentioned # needing them buildInputs = [ - zlib a52dec libmad faad2 ffmpeg alsaLib libdvdnav libdvdnav.libdvdread + zlib a52dec libmad faad2 ffmpeg alsa-lib libdvdnav libdvdnav.libdvdread libbluray dbus fribidi libvorbis libtheora speex lua5 libgcrypt libgpgerror libupnp libcaca libpulseaudio flac schroedinger libxml2 librsvg mpeg2dec systemd gnutls avahi libcddb SDL SDL_image libmtp taglib libarchive diff --git a/third_party/nixpkgs/pkgs/applications/video/vokoscreen/default.nix b/third_party/nixpkgs/pkgs/applications/video/vokoscreen/default.nix index 598a162f39..aeea52a4ff 100644 --- a/third_party/nixpkgs/pkgs/applications/video/vokoscreen/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/vokoscreen/default.nix @@ -1,5 +1,5 @@ { lib, fetchFromGitHub, mkDerivation -, pkg-config, qtbase, qttools, qmake, qtmultimedia, qtx11extras, alsaLib, libv4l, libXrandr +, pkg-config, qtbase, qttools, qmake, qtmultimedia, qtx11extras, alsa-lib, libv4l, libXrandr , ffmpeg }: @@ -17,7 +17,7 @@ mkDerivation rec { nativeBuildInputs = [ pkg-config qmake ]; buildInputs = [ - alsaLib + alsa-lib libv4l qtbase qtmultimedia diff --git a/third_party/nixpkgs/pkgs/applications/video/webcamoid/default.nix b/third_party/nixpkgs/pkgs/applications/video/webcamoid/default.nix index aea8266b1d..63f1e885af 100644 --- a/third_party/nixpkgs/pkgs/applications/video/webcamoid/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/webcamoid/default.nix @@ -1,6 +1,6 @@ { lib, fetchFromGitHub, pkg-config, libxcb, mkDerivation, qmake , qtbase, qtdeclarative, qtquickcontrols, qtquickcontrols2 -, ffmpeg-full, gst_all_1, libpulseaudio, alsaLib, jack2 +, ffmpeg-full, gst_all_1, libpulseaudio, alsa-lib, jack2 , v4l-utils }: mkDerivation rec { pname = "webcamoid"; @@ -18,7 +18,7 @@ mkDerivation rec { qtbase qtdeclarative qtquickcontrols qtquickcontrols2 ffmpeg-full gst_all_1.gstreamer gst_all_1.gst-plugins-base - alsaLib libpulseaudio jack2 + alsa-lib libpulseaudio jack2 v4l-utils ]; diff --git a/third_party/nixpkgs/pkgs/applications/video/webtorrent_desktop/default.nix b/third_party/nixpkgs/pkgs/applications/video/webtorrent_desktop/default.nix index 7660edcc76..3b486654ae 100644 --- a/third_party/nixpkgs/pkgs/applications/video/webtorrent_desktop/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/webtorrent_desktop/default.nix @@ -1,5 +1,5 @@ { - alsaLib, atk, cairo, cups, dbus, dpkg, expat, fetchurl, fetchzip, fontconfig, freetype, + alsa-lib, atk, cairo, cups, dbus, dpkg, expat, fetchurl, fetchzip, fontconfig, freetype, gdk-pixbuf, glib, gtk3, libX11, libXScrnSaver, libXcomposite, libXcursor, libXdamage, libXext, libXfixes, libXi, libXrandr, libXrender, libXtst, libxcb, nspr, nss, lib, stdenv, udev, libuuid, pango, at-spi2-atk, at-spi2-core @@ -7,7 +7,7 @@ let rpath = lib.makeLibraryPath ([ - alsaLib + alsa-lib atk at-spi2-core at-spi2-atk diff --git a/third_party/nixpkgs/pkgs/applications/video/wxcam/default.nix b/third_party/nixpkgs/pkgs/applications/video/wxcam/default.nix index f197abacee..5a6c6ff524 100644 --- a/third_party/nixpkgs/pkgs/applications/video/wxcam/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/wxcam/default.nix @@ -7,7 +7,7 @@ , perlPackages , xvidcore , mjpegtools -, alsaLib +, alsa-lib , libv4l , cimg }: @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { }; buildInputs = with lib; - [ pkg-config intltool libX11 libXv libSM gtk libglade wxGTK perlPackages.XMLParser xvidcore mjpegtools alsaLib libv4l cimg ]; + [ pkg-config intltool libX11 libXv libSM gtk libglade wxGTK perlPackages.XMLParser xvidcore mjpegtools alsa-lib libv4l cimg ]; NIX_CFLAGS_COMPILE="-I ${cimg}/include/cimg"; diff --git a/third_party/nixpkgs/pkgs/applications/video/xawtv/default.nix b/third_party/nixpkgs/pkgs/applications/video/xawtv/default.nix index 0945c5b3f3..b046fbebaa 100644 --- a/third_party/nixpkgs/pkgs/applications/video/xawtv/default.nix +++ b/third_party/nixpkgs/pkgs/applications/video/xawtv/default.nix @@ -4,7 +4,7 @@ , libjpeg , libX11 , libXt -, alsaLib +, alsa-lib , aalib , libXft , xorgproto @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { xorgproto libFS perl - alsaLib + alsa-lib aalib libXaw libXpm diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/bochs/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/bochs/default.nix index 3a8e9dc0be..e614b3da2b 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/bochs/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/bochs/default.nix @@ -1,23 +1,24 @@ -{ lib, stdenv, fetchurl -, pkg-config, libtool -, gtk2, libGLU, libGL, readline, libX11, libXpm -, docbook_xml_dtd_45, docbook_xsl -, sdlSupport ? true, SDL2 ? null -, termSupport ? true, ncurses ? null -, wxSupport ? true, wxGTK ? null -, wgetSupport ? false, wget ? null -, curlSupport ? false, curl ? null +{ lib +, stdenv +, fetchurl +, SDL2 +, curl +, docbook_xml_dtd_45 +, docbook_xsl +, gtk2 +, libGL +, libGLU +, libX11 +, libXpm +, libtool +, ncurses +, pkg-config +, readline +, wget +, wxGTK }: -assert sdlSupport -> (SDL2 != null); -assert termSupport -> (ncurses != null); -assert wxSupport -> (gtk2 != null && wxGTK != null); -assert wgetSupport -> (wget != null); -assert curlSupport -> (curl != null); - -with lib; stdenv.mkDerivation rec { - pname = "bochs"; version = "2.6.11"; @@ -27,18 +28,33 @@ stdenv.mkDerivation rec { }; patches = [ + # A flip between two lines of code, in order to compile with GLIBC 2.26 ./bochs-2.6.11-glibc-2.26.patch - ./fix-build-smp.patch + # Fix compilation for MSYS2 GCC 10; remove it when the next version arrives ./bochs_fix_narrowing_conv_warning.patch + # SMP-enabled configs; remove it when the next version arrives + ./fix-build-smp.patch ]; - buildInputs = - [ pkg-config libtool gtk2 libGLU libGL readline libX11 libXpm docbook_xml_dtd_45 docbook_xsl ] - ++ optionals termSupport [ ncurses ] - ++ optionals sdlSupport [ SDL2 ] - ++ optionals wxSupport [ wxGTK ] - ++ optionals wgetSupport [ wget ] - ++ optionals curlSupport [ curl ]; + nativeBuildInputs = [ + docbook_xml_dtd_45 + docbook_xsl + pkg-config + ]; + buildInputs = [ + SDL2 + curl + gtk2 + libGL + libtool + libGLU + libX11 + libXpm + ncurses + readline + wget + wxGTK + ]; configureFlags = [ "--with-x=yes" @@ -64,49 +80,51 @@ stdenv.mkDerivation rec { # Dangerous options - they are marked as "incomplete/experimental" on Bochs documentation "--enable-3dnow=no" "--enable-monitor-mwait=no" - "--enable-raw-serial=no" ] - # Boolean flags - ++ optionals termSupport [ "--with-term" ] - ++ optionals sdlSupport [ "--with-sdl2" ] - ++ optionals wxSupport [ "--with-wx" ] + "--enable-raw-serial=no" + # These are completely configurable, and they don't depend of external tools - ++ [ "--enable-cpu-level=6" # from 3 to 6 - "--enable-largefile" - "--enable-idle-hack" - "--enable-plugins=no" # Plugins are a bit buggy in Bochs - "--enable-a20-pin" - "--enable-x86-64" - "--enable-smp" - "--enable-large-ramfile" - "--enable-repeat-speedups" - "--enable-handlers-chaining" - "--enable-trace-linking" - "--enable-configurable-msrs" - "--enable-show-ips" - "--enable-debugger" #conflicts with gdb-stub option - "--enable-disasm" - "--enable-debugger-gui" - "--enable-gdb-stub=no" # conflicts with debugger option - "--enable-iodebug" - "--enable-fpu" - "--enable-svm" - "--enable-avx" - "--enable-evex" - "--enable-x86-debugger" - "--enable-pci" - "--enable-usb" - "--enable-usb-ohci" - "--enable-usb-ehci" - "--enable-usb-xhci" - "--enable-ne2000" - "--enable-pnic" - "--enable-e1000" - "--enable-clgd54xx" - "--enable-voodoo" - "--enable-cdrom" - "--enable-sb16" - "--enable-es1370" - "--enable-busmouse" ]; + "--enable-a20-pin" + "--enable-avx" + "--enable-busmouse" + "--enable-cdrom" + "--enable-clgd54xx" + "--enable-configurable-msrs" + "--enable-cpu-level=6" # from 3 to 6 + "--enable-debugger" #conflicts with gdb-stub option + "--enable-debugger-gui" + "--enable-disasm" + "--enable-e1000" + "--enable-es1370" + "--enable-evex" + "--enable-fpu" + "--enable-gdb-stub=no" # conflicts with debugger option + "--enable-handlers-chaining" + "--enable-idle-hack" + "--enable-iodebug" + "--enable-large-ramfile" + "--enable-largefile" + "--enable-ne2000" + "--enable-pci" + "--enable-plugins=no" # Plugins are a bit buggy in Bochs + "--enable-pnic" + "--enable-repeat-speedups" + "--enable-sb16" + "--enable-show-ips" + "--enable-smp" + "--enable-svm" + "--enable-trace-linking" + "--enable-usb" + "--enable-usb-ehci" + "--enable-usb-ohci" + "--enable-usb-xhci" + "--enable-voodoo" + "--enable-x86-64" + "--enable-x86-debugger" + ] + # Boolean flags + ++ lib.optionals (SDL2 != null) [ "--with-sdl2" ] + ++ lib.optionals (ncurses != null) [ "--with-term" ] + ++ lib.optionals (gtk2 != null && wxGTK != null) [ "--with-wx" ]; NIX_CFLAGS_COMPILE="-I${gtk2.dev}/include/gtk-2.0/ -I${libtool}/include/"; NIX_LDFLAGS="-L${libtool.lib}/lib"; @@ -115,19 +133,18 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; - meta = { + meta = with lib; { + homepage = "http://bochs.sourceforge.io/"; description = "An open-source IA-32 (x86) PC emulator"; longDescription = '' Bochs is an open-source (LGPL), highly portable IA-32 PC emulator, written in C++, that runs on most popular platforms. It includes emulation of the Intel x86 CPU, common I/O devices, and a custom BIOS. ''; - homepage = "http://bochs.sourceforge.net/"; license = licenses.lgpl2Plus; maintainers = with maintainers; [ AndersonTorres ]; platforms = platforms.unix; }; } # TODO: plugins -# TODO: svga support - the Bochs sources explicitly cite /usr/include/vga.h # TODO: a better way to organize the options diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/containerd/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/containerd/default.nix index 5435c88f58..ca9ae20f34 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/containerd/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/containerd/default.nix @@ -1,6 +1,6 @@ { lib , fetchFromGitHub -, buildGoPackage +, buildGoModule , btrfs-progs , go-md2man , installShellFiles @@ -8,19 +8,20 @@ , nixosTests }: -buildGoPackage rec { +buildGoModule rec { pname = "containerd"; - version = "1.5.1"; + version = "1.5.2"; + + outputs = [ "out" "man" ]; src = fetchFromGitHub { owner = "containerd"; repo = "containerd"; rev = "v${version}"; - sha256 = "sha256-jVyg+fyMuDnV/TM0Z2t+Cr17a6XBv11aWijhsqMnA5s="; + sha256 = "sha256-RDLAmPBjDHCx9al+gstUTrvKc/L0vAm8IEd/mvX5Als="; }; - goPackagePath = "github.com/containerd/containerd"; - outputs = [ "out" "man" ]; + vendorSha256 = null; nativeBuildInputs = [ go-md2man installShellFiles util-linux ]; @@ -28,11 +29,9 @@ buildGoPackage rec { buildFlags = [ "VERSION=v${version}" "REVISION=${src.rev}" ]; - BUILDTAGS = [ ] - ++ lib.optional (btrfs-progs == null) "no_btrfs"; + BUILDTAGS = lib.optionals (btrfs-progs == null) [ "no_btrfs" ]; buildPhase = '' - cd go/src/${goPackagePath} patchShebangs . make binaries man $buildFlags ''; diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/crun/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/crun/default.nix index 2e7700d855..e172248c8d 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/crun/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/crun/default.nix @@ -38,13 +38,13 @@ let in stdenv.mkDerivation rec { pname = "crun"; - version = "0.20"; + version = "0.20.1"; src = fetchFromGitHub { owner = "containers"; repo = pname; rev = version; - sha256 = "sha256-NlpgdRizQFt5T3CRxt0DVXTVPUbge9uPc9B7LuR3o1k="; + sha256 = "sha256-Fo8UCUwZ5RiJTXs1jWn1Mwq2qvK8p++ETxW9Tseokjw="; fetchSubmodules = true; }; diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/docker-compose/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/docker-compose/default.nix index 233ee13ead..cc89368067 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/docker-compose/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/docker-compose/default.nix @@ -3,7 +3,7 @@ , mock, pytest, nose , pyyaml, backports_ssl_match_hostname, colorama, docopt , dockerpty, docker, ipaddress, jsonschema, requests -, six, texttable, websocket_client, cached-property +, six, texttable, websocket-client, cached-property , enum34, functools32, paramiko, distro, python-dotenv }: @@ -22,7 +22,7 @@ buildPythonApplication rec { checkInputs = [ mock pytest nose ]; propagatedBuildInputs = [ pyyaml colorama dockerpty docker - ipaddress jsonschema requests six texttable websocket_client + ipaddress jsonschema requests six texttable websocket-client docopt cached-property paramiko distro python-dotenv ] ++ lib.optional (pythonOlder "3.7") backports_ssl_match_hostname ++ lib.optional (pythonOlder "3.4") enum34 diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/docker-slim/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/docker-slim/default.nix index e9acf58713..09ba9a7518 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/docker-slim/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/docker-slim/default.nix @@ -6,7 +6,7 @@ buildGoPackage rec { pname = "docker-slim"; - version = "1.35.2"; + version = "1.36.1"; goPackagePath = "github.com/docker-slim/docker-slim"; @@ -14,7 +14,7 @@ buildGoPackage rec { owner = "docker-slim"; repo = "docker-slim"; rev = version; - sha256 = "sha256-Pg3vPvnEo1OkCakwkwS/HaFnvmpjuHHlGqIjddO6jwQ="; + sha256 = "sha256-BoBZBzQYd/HbOCerpvcNcR/7Fds6+weY2QFRjqSfOjU="; }; subPackages = [ "cmd/docker-slim" "cmd/docker-slim-sensor" ]; diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/docker/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/docker/default.nix index bec51af81a..ee7c4d6bcf 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/docker/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/docker/default.nix @@ -11,7 +11,7 @@ rec { , tiniRev, tiniSha256, buildxSupport ? false # package dependencies , stdenv, fetchFromGitHub, buildGoPackage - , makeWrapper, installShellFiles, pkg-config + , makeWrapper, installShellFiles, pkg-config, glibc , go-md2man, go, containerd, runc, docker-proxy, tini, libtool , sqlite, iproute2, lvm2, systemd, docker-buildx , btrfs-progs, iptables, e2fsprogs, xz, util-linux, xfsprogs, git @@ -56,7 +56,9 @@ rec { }; # Do not remove static from make files as we want a static binary - patchPhase = ""; + postPatch = ""; + + buildInputs = [ glibc glibc.static ]; NIX_CFLAGS_COMPILE = "-DMINIMAL=ON"; }); diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/gvisor/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/gvisor/default.nix index e6b83286c0..4cd043d4eb 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/gvisor/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/gvisor/default.nix @@ -1,6 +1,8 @@ { lib , buildBazelPackage , fetchFromGitHub +, callPackage +, bash , cacert , git , glibcLocales @@ -9,6 +11,7 @@ , iptables , makeWrapper , procps +, protobuf , python3 }: @@ -16,9 +19,12 @@ let preBuild = '' patchShebangs . + substituteInPlace tools/defs.bzl \ + --replace "#!/bin/bash" "#!${bash}/bin/bash" + # Tell rules_go to use the Go binary found in the PATH sed -E -i \ - -e 's|go_version\s*=\s*"[^"]+",|go_version = "host",|g' \ + -e 's|go_version\s*=\s*"[^"]+"|go_version = "host"|g' \ WORKSPACE # The gazelle Go tooling needs CA certs @@ -31,20 +37,37 @@ let export GOPATH= ''; + # Patch the protoc alias so that it always builds from source. + rulesProto = fetchFromGitHub { + owner = "bazelbuild"; + repo = "rules_proto"; + rev = "f7a30f6f80006b591fa7c437fe5a951eb10bcbcf"; + sha256 = "10bcw0ir0skk7h33lmqm38n9w4nfs24mwajnngkbs6jb5wsvkqv8"; + extraPostFetch = '' + sed -i 's|name = "protoc"|name = "_protoc_original"|' $out/proto/private/BUILD.release + cat <>$out/proto/private/BUILD.release + alias(name = "protoc", actual = "@com_github_protocolbuffers_protobuf//:protoc", visibility = ["//visibility:public"]) + EOF + ''; + }; + in buildBazelPackage rec { name = "gvisor-${version}"; - version = "2019-11-14"; + version = "20210518.0"; src = fetchFromGitHub { owner = "google"; repo = "gvisor"; - rev = "release-20191114.0"; - sha256 = "0kyixjjlws9iz2r2srgpdd4rrq94vpxkmh2rmmzxd9mcqy2i9bg1"; + rev = "release-${version}"; + sha256 = "15a6mlclnyfc9mx3bjksnnf4vla0xh0rv9kxdp34la4gw3c4hksn"; }; nativeBuildInputs = [ git glibcLocales go makeWrapper python3 ]; bazelTarget = "//runsc:runsc"; + bazelFlags = [ + "--override_repository=rules_proto=${rulesProto}" + ]; # gvisor uses the Starlark implementation of rules_cc, not the built-in one, # so we shouldn't delete it from our dependencies. @@ -76,14 +99,14 @@ in buildBazelPackage rec { rm -f "$bazelOut"/java.log "$bazelOut"/java.log.* ''; - sha256 = "0fhmlq0d2317gwhma2mz1anb69j4chybk90j71j88wpgw1hxbk34"; + sha256 = "13pahppm431m198v5bffrzq5iw8m79riplbfqp0afh384ln669hb"; }; buildAttrs = { inherit preBuild; installPhase = '' - install -Dm755 bazel-bin/runsc/*_pure_stripped/runsc $out/bin/runsc + install -Dm755 bazel-out/*/bin/runsc/runsc_/runsc $out/bin/runsc # Needed for the 'runsc do' subcomand wrapProgram $out/bin/runsc \ diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/lima/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/lima/default.nix new file mode 100644 index 0000000000..9ada335172 --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/virtualization/lima/default.nix @@ -0,0 +1,53 @@ +{ lib +, buildGoModule +, fetchFromGitHub +, installShellFiles +, qemu +, makeWrapper +}: + +buildGoModule rec { + pname = "lima"; + version = "0.4.0"; + + src = fetchFromGitHub { + owner = "AkihiroSuda"; + repo = pname; + rev = "v${version}"; + sha256 = "sha256-vwAxVBy2SqghxJGscSZ1o1B8EMvQh1fz5CS1YG7Rq2g="; + }; + + vendorSha256 = "sha256-xM9LLh5c5QBrcIptdqiNNp1nU9GcdQvwrCnnyuXWYfE="; + + nativeBuildInputs = [ makeWrapper installShellFiles ]; + + buildPhase = '' + runHook preBuild + make "VERSION=v${version}" binaries + runHook postBuild + ''; + + installPhase = '' + runHook preInstall + mkdir -p $out + cp -r _output/* $out + wrapProgram $out/bin/limactl \ + --prefix PATH : ${lib.makeBinPath [ qemu ]} + installShellCompletion --cmd limactl \ + --bash <($out/bin/limactl completion bash) + runHook postInstall + ''; + + doInstallCheck = true; + installCheckPhase = '' + USER=nix $out/bin/limactl validate examples/default.yaml + ''; + + meta = with lib; { + homepage = "https://github.com/AkihiroSuda/lima"; + description = "Linux virtual machines (on macOS, in most cases)"; + license = licenses.asl20; + maintainers = with maintainers; [ anhduy ]; + }; +} + diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/podman/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/podman/default.nix index 10a6d726ae..5ab696ed1d 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/podman/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/podman/default.nix @@ -17,19 +17,15 @@ buildGoModule rec { pname = "podman"; - version = "3.1.2"; + version = "3.2.2"; src = fetchFromGitHub { owner = "containers"; repo = "podman"; rev = "v${version}"; - sha256 = "sha256-PS41e7myv5xCSJIeT+SRj4rLVCXpthq7KeHisYoSiOE="; + sha256 = "sha256-D1gtKaDZ7/SyySYWmDa3eDHbh2f5B3q1VEYKgl1pXCE="; }; - patches = [ - ./remove-unconfigured-runtime-warn.patch - ]; - vendorSha256 = null; doCheck = false; @@ -61,7 +57,7 @@ buildGoModule rec { installPhase = '' runHook preInstall '' + lib.optionalString stdenv.isDarwin '' - mv bin/{podman-remote,podman} + mv bin/{darwin/podman,podman} '' + '' install -Dm555 bin/podman $out/bin/podman installShellCompletion --bash completions/bash/* diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/podman/remove-unconfigured-runtime-warn.patch b/third_party/nixpkgs/pkgs/applications/virtualization/podman/remove-unconfigured-runtime-warn.patch deleted file mode 100644 index 8530cd93cd..0000000000 --- a/third_party/nixpkgs/pkgs/applications/virtualization/podman/remove-unconfigured-runtime-warn.patch +++ /dev/null @@ -1,23 +0,0 @@ -Remove warning "WARN[0000] Found default OCIruntime /nix/store/.../bin/crun path which is missing from [engine.runtimes] in containers.conf - -It doesn't make sense as we promote using the podman wrapper where runtime paths will vary because they are nix store paths. ---- - vendor/github.com/containers/common/pkg/config/config.go | 3 +-- - 1 file changed, 1 insertion(+), 2 deletions(-) - -diff --git a/vendor/github.com/containers/common/pkg/config/config.go b/vendor/github.com/containers/common/pkg/config/config.go -index 4a98c7e92..4a95a2a49 100644 ---- a/vendor/github.com/containers/common/pkg/config/config.go -+++ b/vendor/github.com/containers/common/pkg/config/config.go -@@ -605,8 +605,7 @@ func (c *EngineConfig) findRuntime() string { - return name - } - } -- if path, err := exec.LookPath(name); err == nil { -- logrus.Warningf("Found default OCIruntime %s path which is missing from [engine.runtimes] in containers.conf", path) -+ if _, err := exec.LookPath(name); err == nil { - return name - } - } --- -2.30.0 diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/qemu/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/qemu/default.nix index 0a9de4eb10..7fd01a8ffa 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/qemu/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/qemu/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, fetchpatch, python, zlib, pkg-config, glib -, perl, pixman, vde2, alsaLib, texinfo, flex +, perl, pixman, vde2, alsa-lib, texinfo, flex , bison, lzo, snappy, libaio, gnutls, nettle, curl, ninja, meson , makeWrapper, autoPatchelfHook , attr, libcap, libcap_ng @@ -70,7 +70,7 @@ stdenv.mkDerivation rec { ++ optionals smartcardSupport [ libcacard ] ++ optionals spiceSupport [ spice-protocol spice ] ++ optionals usbredirSupport [ usbredir ] - ++ optionals stdenv.isLinux [ alsaLib libaio libcap_ng libcap attr ] + ++ optionals stdenv.isLinux [ alsa-lib libaio libcap_ng libcap attr ] ++ optionals xenSupport [ xen ] ++ optionals cephSupport [ ceph ] ++ optionals glusterfsSupport [ glusterfs libuuid ] diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/runc/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/runc/default.nix index 795971a749..8f7a88a218 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/runc/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/runc/default.nix @@ -1,6 +1,6 @@ { lib , fetchFromGitHub -, buildGoPackage +, buildGoModule , go-md2man , installShellFiles , pkg-config @@ -14,18 +14,18 @@ , nixosTests }: -buildGoPackage rec { +buildGoModule rec { pname = "runc"; - version = "1.0.0-rc95"; + version = "1.0.0"; src = fetchFromGitHub { owner = "opencontainers"; repo = "runc"; rev = "v${version}"; - sha256 = "sha256-q4sXcvJO9gyo7m0vlaMrwh7ZZHYa58FJy3GatWndS6M="; + sha256 = "sha256-slNVSlyJLaqIFF4uJP/7u4M0AkJLQjqkHO5TeKFYgSA="; }; - goPackagePath = "github.com/opencontainers/runc"; + vendorSha256 = null; outputs = [ "out" "man" ]; nativeBuildInputs = [ go-md2man installShellFiles makeWrapper pkg-config which ]; @@ -36,7 +36,6 @@ buildGoPackage rec { buildPhase = '' runHook preBuild - cd go/src/${goPackagePath} patchShebangs . make ${toString makeFlags} runc man runHook postBuild diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/singularity/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/singularity/default.nix index 2610e1f0fc..bf3285a78e 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/singularity/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/singularity/default.nix @@ -15,11 +15,11 @@ with lib; buildGoPackage rec { pname = "singularity"; - version = "3.7.4"; + version = "3.8.0"; src = fetchurl { url = "https://github.com/hpcng/singularity/releases/download/v${version}/singularity-${version}.tar.gz"; - sha256 = "sha256-wmY2movydH9E4HWYWMP8OyMluXWogYsmaPC5exJNAWQ="; + sha256 = "sha256-6WCLDgqMgFIYu+eV6RdkhIN7L3/LleVGm4U7OAmiQS4="; }; goPackagePath = "github.com/sylabs/singularity"; diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/spice-vdagent/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/spice-vdagent/default.nix index 2abb16298d..2b27e3a787 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/spice-vdagent/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/spice-vdagent/default.nix @@ -1,4 +1,4 @@ -{lib, stdenv, fetchurl, pkg-config, alsaLib, spice-protocol, glib, +{lib, stdenv, fetchurl, pkg-config, alsa-lib, spice-protocol, glib, libpciaccess, libxcb, libXrandr, libXinerama, libXfixes, dbus, libdrm, systemd}: stdenv.mkDerivation rec { @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { substituteInPlace data/spice-vdagent.desktop --replace /usr $out ''; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib spice-protocol glib libdrm + buildInputs = [ alsa-lib spice-protocol glib libdrm libpciaccess libxcb libXrandr libXinerama libXfixes dbus systemd ] ; meta = { diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/tini/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/tini/default.nix index dd7bcb1997..76668301c6 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/tini/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/tini/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, cmake, glibc }: +{ lib, stdenv, fetchFromGitHub, cmake }: stdenv.mkDerivation rec { version = "0.19.0"; @@ -11,12 +11,11 @@ stdenv.mkDerivation rec { sha256 ="1hnnvjydg7gi5gx6nibjjdnfipblh84qcpajc08nvr44rkzswck4"; }; - patchPhase = "sed -i /tini-static/d CMakeLists.txt"; + postPatch = "sed -i /tini-static/d CMakeLists.txt"; NIX_CFLAGS_COMPILE = "-DPR_SET_CHILD_SUBREAPER=36 -DPR_GET_CHILD_SUBREAPER=37"; nativeBuildInputs = [ cmake ]; - buildInputs = [ glibc glibc.static ]; meta = with lib; { description = "A tiny but valid init for containers"; diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/virtualbox/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/virtualbox/default.nix index 4f792b4eb6..0bc3af364e 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/virtualbox/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/virtualbox/default.nix @@ -2,7 +2,7 @@ , libX11, xorgproto, libXext, libXcursor, libXmu, libIDL, SDL, libcap, libGL , libpng, glib, lvm2, libXrandr, libXinerama, libopus, qtbase, qtx11extras , qttools, qtsvg, qtwayland, pkg-config, which, docbook_xsl, docbook_xml_dtd_43 -, alsaLib, curl, libvpx, nettools, dbus, substituteAll +, alsa-lib, curl, libvpx, nettools, dbus, substituteAll # If open-watcom-bin is not passed, VirtualBox will fall back to use # the shipped alternative sources (assembly). , open-watcom-bin ? null @@ -53,7 +53,7 @@ in stdenv.mkDerivation { buildInputs = [ iasl' dev86 libxslt libxml2 xorgproto libX11 libXext libXcursor libIDL - libcap glib lvm2 alsaLib curl libvpx pam makeself perl + libcap glib lvm2 alsa-lib curl libvpx pam makeself perl libXmu libpng libopus python ] ++ optional javaBindings jdk ++ optional pythonBindings python # Python is needed even when not building bindings @@ -82,7 +82,7 @@ in stdenv.mkDerivation { s@"libdbus-1\.so\.3"@"${dbus.lib}/lib/libdbus-1.so.3"@g' grep 'libasound\.so\.2' src include -rI --files-with-match | xargs sed -i -e ' - s@"libasound\.so\.2"@"${alsaLib.out}/lib/libasound.so.2"@g' + s@"libasound\.so\.2"@"${alsa-lib.out}/lib/libasound.so.2"@g' export USER=nix set +x diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/xen/4.10.nix b/third_party/nixpkgs/pkgs/applications/virtualization/xen/4.10.nix index 765baa0a3b..cb91d85056 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/xen/4.10.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/xen/4.10.nix @@ -10,7 +10,7 @@ # qemu , udev, pciutils, xorg, SDL, pixman, acl, glusterfs, spice-protocol, usbredir -, alsaLib, glib, python2 +, alsa-lib, glib, python2 , ... } @ args: assert withInternalSeabios -> !withSeabios; @@ -33,7 +33,7 @@ let qemuDeps = [ udev pciutils xorg.libX11 SDL pixman acl glusterfs spice-protocol usbredir - alsaLib glib python2 + alsa-lib glib python2 ]; in diff --git a/third_party/nixpkgs/pkgs/applications/virtualization/xhyve/default.nix b/third_party/nixpkgs/pkgs/applications/virtualization/xhyve/default.nix index db9a7ef825..f093e94696 100644 --- a/third_party/nixpkgs/pkgs/applications/virtualization/xhyve/default.nix +++ b/third_party/nixpkgs/pkgs/applications/virtualization/xhyve/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "xhyve"; - version = "20191001"; + version = "20210203"; src = fetchFromGitHub { owner = "machyve"; repo = "xhyve"; - rev = "1f46a3d0bbeb6c90883f302425844fcc3800a776"; - sha256 = "0mm9xa0v6n7xl2qypnppq5abdncd31vffiklrhcrlni5ymyh9ia5"; + rev = "83516a009c692ea5d2993d1071e68d05d359b11e"; + sha256 = "1pjdg4ppy6qh3vr1ls5zyw3jzcvwny9wydnmfpadwij1hvns7lj3"; }; buildInputs = [ Hypervisor vmnet xpc libobjc zlib ]; diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/cage/default.nix b/third_party/nixpkgs/pkgs/applications/window-managers/cage/default.nix index 1632ae027c..7aabdf2719 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/cage/default.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/cage/default.nix @@ -8,13 +8,13 @@ stdenv.mkDerivation rec { pname = "cage"; - version = "0.1.3"; + version = "0.1.4"; src = fetchFromGitHub { owner = "Hjdskes"; repo = "cage"; rev = "v${version}"; - sha256 = "0ixl45g0m8b75gvbjm3gf5qg0yplspgs0xpm2619wn5sygc47sb1"; + sha256 = "0vm96gxinhy48m3x9p1sfldyd03w3gk6iflb7n9kn06j1vqyswr6"; }; nativeBuildInputs = [ meson ninja pkg-config wayland scdoc makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/cage/wlroots-0_14.patch b/third_party/nixpkgs/pkgs/applications/window-managers/cage/wlroots-0_14.patch new file mode 100644 index 0000000000..2e56835f4f --- /dev/null +++ b/third_party/nixpkgs/pkgs/applications/window-managers/cage/wlroots-0_14.patch @@ -0,0 +1,36 @@ +From 9a4523d47efeafd674d419169fe161e5a3b31cb3 Mon Sep 17 00:00:00 2001 +From: Jan Beich +Date: Thu, 3 Jun 2021 17:53:11 +0000 +Subject: [PATCH 1/3] view: chase swaywm/wlroots@9e58301df7f0 + +view.c:238:52: error: no member named 'subsurfaces' in 'struct wlr_surface' + wl_list_for_each (subsurface, &view->wlr_surface->subsurfaces, parent_link) { + ~~~~~~~~~~~~~~~~~ ^ +/usr/include/wayland-util.h:443:30: note: expanded from macro 'wl_list_for_each' + for (pos = wl_container_of((head)->next, pos, member); \ + ^~~~ +/usr/include/wayland-util.h:409:32: note: expanded from macro 'wl_container_of' + (__typeof__(sample))((char *)(ptr) - \ + ^~~ + +Based on https://github.com/swaywm/sway/commit/3162766eef14 +--- + view.c | 5 ++++- + 1 file changed, 4 insertions(+), 1 deletion(-) + +diff --git a/view.c b/view.c +index b9ba9c2..3f3b0ed 100644 +--- a/view.c ++++ b/view.c +@@ -235,7 +235,10 @@ view_map(struct cg_view *view, struct wlr_surface *surface) + view->wlr_surface = surface; + + struct wlr_subsurface *subsurface; +- wl_list_for_each (subsurface, &view->wlr_surface->subsurfaces, parent_link) { ++ wl_list_for_each (subsurface, &view->wlr_surface->subsurfaces_below, parent_link) { ++ subsurface_create(view, subsurface); ++ } ++ wl_list_for_each (subsurface, &view->wlr_surface->subsurfaces_above, parent_link) { + subsurface_create(view, subsurface); + } + diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/cagebreak/default.nix b/third_party/nixpkgs/pkgs/applications/window-managers/cagebreak/default.nix index d88bc0cdbd..d3da358b63 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/cagebreak/default.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/cagebreak/default.nix @@ -1,6 +1,7 @@ { lib , stdenv , fetchFromGitHub +, fetchpatch , cairo , fontconfig , libxkbcommon @@ -31,6 +32,15 @@ stdenv.mkDerivation rec { hash = "sha256-1IztedN5/I/4TDKHLJ26fSrDsvJ5QAr+cbzS2PQITDE="; }; + patches = [ + # To fix the build with wlroots 0.14.0: + (fetchpatch { + # Add fixes for wlroots 0.14.0 + url = "https://github.com/project-repo/cagebreak/commit/d57869d43add58331386fc8e89c14bb2b74afe17.patch"; + sha256 = "0g6sl8y4kk0bm5x6pxqbxw2j0gyg3ybr2v9m70q2pxp70kms4lqg"; + }) + ]; + nativeBuildInputs = [ makeWrapper meson diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/dwm/dwm-status.nix b/third_party/nixpkgs/pkgs/applications/window-managers/dwm/dwm-status.nix index ba284b7686..7b22eb3992 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/dwm/dwm-status.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/dwm/dwm-status.nix @@ -1,9 +1,9 @@ { lib, rustPlatform, fetchFromGitHub, dbus, gdk-pixbuf, libnotify, makeWrapper, pkg-config, xorg -, enableAlsaUtils ? true, alsaUtils, coreutils +, enableAlsaUtils ? true, alsa-utils, coreutils , enableNetwork ? true, dnsutils, iproute2, wirelesstools }: let - bins = lib.optionals enableAlsaUtils [ alsaUtils coreutils ] + bins = lib.optionals enableAlsaUtils [ alsa-utils coreutils ] ++ lib.optionals enableNetwork [ dnsutils iproute2 wirelesstools ]; in diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/hikari/default.nix b/third_party/nixpkgs/pkgs/applications/window-managers/hikari/default.nix index 23c7d9f680..a9545757d7 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/hikari/default.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/hikari/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchzip, +{ lib, stdenv, fetchzip, fetchpatch, pkg-config, bmake, cairo, glib, libevdev, libinput, libxkbcommon, linux-pam, pango, pixman, libucl, wayland, wayland-protocols, wlroots, mesa, @@ -12,7 +12,7 @@ let pname = "hikari"; - version = "2.3.0"; + version = "2.3.1"; in stdenv.mkDerivation { @@ -20,7 +20,7 @@ stdenv.mkDerivation { src = fetchzip { url = "https://hikari.acmelabs.space/releases/${pname}-${version}.tar.gz"; - sha256 = "0vxwma2r9mb2h0c3dkpvf8dbrc2x2ykhc5bb0vd72sl9pwj4jxmy"; + sha256 = "sha256-o6YsUATcWHSuAEfU7WnwxKNxRNuBt069qCv0FKDWStg="; }; nativeBuildInputs = [ pkg-config bmake ]; diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/i3/balance-workspace.nix b/third_party/nixpkgs/pkgs/applications/window-managers/i3/balance-workspace.nix index 18e9167227..4647f0a072 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/i3/balance-workspace.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/i3/balance-workspace.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "i3-balance-workspace"; - version = "1.8.3"; + version = "1.8.5"; src = fetchPypi { inherit pname version; - sha256 = "1gndzrwff8gfdqjjxv4zf2h2k0x7y97w1c3mrjpihz8xd0hbnk4d"; + sha256 = "7b5d72b756f79878a058484825bb343b100433e00a01f80c9c6d1ccc9f4af57a"; }; propagatedBuildInputs = [ i3ipc ]; diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/i3/blocks-gaps.nix b/third_party/nixpkgs/pkgs/applications/window-managers/i3/blocks-gaps.nix index df774aa417..4acc2fb669 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/i3/blocks-gaps.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/i3/blocks-gaps.nix @@ -1,5 +1,5 @@ { fetchFromGitHub, lib, stdenv, perl, makeWrapper -, iproute2, acpi, sysstat, alsaUtils +, iproute2, acpi, sysstat, alsa-utils , scripts ? [ "bandwidth" "battery" "cpu_usage" "disk" "iface" "load_average" "memory" "volume" "wifi" ] }: @@ -38,7 +38,7 @@ stdenv.mkDerivation rec { wrapProgram $out/libexec/i3blocks/iface \ --prefix PATH : ${makeBinPath (optional (elem "iface" scripts) iproute2)} wrapProgram $out/libexec/i3blocks/volume \ - --prefix PATH : ${makeBinPath (optional (elem "volume" scripts) alsaUtils)} + --prefix PATH : ${makeBinPath (optional (elem "volume" scripts) alsa-utils)} ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/i3/lock-color.nix b/third_party/nixpkgs/pkgs/applications/window-managers/i3/lock-color.nix index 4182c8689e..63a4995311 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/i3/lock-color.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/i3/lock-color.nix @@ -4,14 +4,14 @@ }: stdenv.mkDerivation rec { - version = "2.13.c.3"; + version = "2.13.c.4"; pname = "i3lock-color"; src = fetchFromGitHub { owner = "PandorasFox"; repo = "i3lock-color"; rev = version; - sha256 = "0spldmis8fvnclwwi9xvnq2rq3hmpbiv3ck5p9pjf40ismvsi16k"; + sha256 = "sha256-bbjkvgSKD57sdOtPYGLAKpQoIsJnF6s6ySq4dTWC3tI="; }; nativeBuildInputs = [ autoreconfHook pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/i3/status-rust.nix b/third_party/nixpkgs/pkgs/applications/window-managers/i3/status-rust.nix index 043c9f44bc..fe0cde61c6 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/i3/status-rust.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/i3/status-rust.nix @@ -12,16 +12,16 @@ rustPlatform.buildRustPackage rec { pname = "i3status-rust"; - version = "0.20.1"; + version = "0.20.2"; src = fetchFromGitHub { owner = "greshake"; repo = pname; rev = "v${version}"; - sha256 = "00gzm3g297s9bfp13vnb623p7dfac3g6cdhz2b3lc6l0kmnnqs1s"; + sha256 = "sha256-9PXvQrh0gmn/G+b7sbQffQkPnUKu1eVrvUoJlRBsOEM="; }; - cargoSha256 = "1dpklyv1b9h4n4k3ar5qbzivds8r4mml76986ic8zj71fy5fxn08"; + cargoSha256 = "sha256-6orDR2Ml1Fy20uT47EDkEk0rGFxO0djHZsFiqlS1Tk8="; nativeBuildInputs = [ pkg-config makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/i3/status.nix b/third_party/nixpkgs/pkgs/applications/window-managers/i3/status.nix index 935a6c3c23..8e9cb2d2b7 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/i3/status.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/i3/status.nix @@ -1,4 +1,4 @@ -{ fetchurl, lib, stdenv, libconfuse, yajl, alsaLib, libpulseaudio, libnl, pkg-config, asciidoc, xmlto, docbook_xml_dtd_45, docbook_xsl }: +{ fetchurl, lib, stdenv, libconfuse, yajl, alsa-lib, libpulseaudio, libnl, pkg-config, asciidoc, xmlto, docbook_xml_dtd_45, docbook_xsl }: stdenv.mkDerivation rec { name = "i3status-2.13"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config asciidoc xmlto docbook_xml_dtd_45 docbook_xsl ]; - buildInputs = [ libconfuse yajl alsaLib libpulseaudio libnl ]; + buildInputs = [ libconfuse yajl alsa-lib libpulseaudio libnl ]; makeFlags = [ "all" "PREFIX=$(out)" ]; diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/labwc/default.nix b/third_party/nixpkgs/pkgs/applications/window-managers/labwc/default.nix index c82eb76f6b..afa391e09d 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/labwc/default.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/labwc/default.nix @@ -1,6 +1,7 @@ { lib , stdenv , fetchFromGitHub +, fetchpatch , pkg-config , meson , ninja @@ -21,15 +22,29 @@ stdenv.mkDerivation rec { pname = "labwc"; - version = "unstable-2021-03-15"; + version = "0.2.1"; # We're effectively using that version src = fetchFromGitHub { owner = "johanmalm"; repo = pname; - rev = "fddeb74527e5b860d9c1a91a237d390041c758b6"; - sha256 = "0rhniv5j4bypqxxj0nbpa3hclmn8znal9rldv0mrgbizn3wsbs54"; + rev = "6744e103014bcb0480133a029ec0f82f9b017e60"; + sha256 = "0sdr4zkix8x3vmna4i946y3whpj7fqizpaac6yj7w0as9d6hj0iq"; }; + patches = [ + # To fix the build with wlroots 0.14: + (fetchpatch { + # output: access texture width/height directly + url = "https://github.com/johanmalm/labwc/commit/892e93dd84c514b4e6f34a0fab01c727edd2d8de.patch"; + sha256 = "1p1pg1kd98727wlcspa2sffl7ijhvsfad6bj2rxsw322q0bz3yrh"; + }) + (fetchpatch { + # xdg: chase swaywm/wlroots@9e58301 + url = "https://github.com/johanmalm/labwc/commit/874cc9e63706dd54d9f9fcb071f2d2e0c19d3d7e.patch"; + sha256 = "0ypd47q5ffq4wjkrcr3068qjknn2s66zszyxg3dl0f87q2pxh6wx"; + }) + ]; + nativeBuildInputs = [ pkg-config meson ninja scdoc ]; buildInputs = [ cairo diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/phosh/default.nix b/third_party/nixpkgs/pkgs/applications/window-managers/phosh/default.nix index 64677c8505..dc1080d97b 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/phosh/default.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/phosh/default.nix @@ -35,36 +35,16 @@ let rev = "ae1a34aafce7026b8c0f65a43c9192d756fe1057"; sha256 = "0a4qh5pgyjki904qf7qmvqz2ksxb0p8xhgl2aixfbhixn0pw6saw"; }; - - executable = writeText "phosh" '' - PHOC_INI=@out@/share/phosh/phoc.ini - GNOME_SESSION_ARGS="--disable-acceleration-check --session=phosh --debug" - - if [ -f /etc/phosh/phoc.ini ]; then - PHOC_INI=/etc/phosh/phoc.ini - elif [ -f /etc/phosh/rootston.ini ]; then - # honor old configs - PHOC_INI=/etc/phosh/rootston.ini - fi - - # Run gnome-session through a login shell so it picks - # variables from /etc/profile.d (XDG_*) - [ -n "$WLR_BACKENDS" ] || WLR_BACKENDS=drm,libinput - export WLR_BACKENDS - exec "${phoc}/bin/phoc" -C "$PHOC_INI" \ - -E "bash -lc 'XDG_DATA_DIRS=$XDG_DATA_DIRS:\$XDG_DATA_DIRS ${gnome.gnome-session}/bin/gnome-session $GNOME_SESSION_ARGS'" - ''; - in stdenv.mkDerivation rec { pname = "phosh"; - version = "0.10.2"; + version = "0.11.0"; src = fetchFromGitLab { domain = "source.puri.sm"; owner = "Librem5"; repo = pname; rev = "v${version}"; - sha256 = "07i8wpzl7311dcf9s57s96qh1v672c75wv6cllrxx7fsmpf8fhx4"; + sha256 = "104qib4blh32s7bg6j3xza3s9syrxrvyh2wpyh5yx7v5wqarr20x"; }; nativeBuildInputs = [ @@ -104,6 +84,8 @@ in stdenv.mkDerivation rec { # Temporarily disabled - Test is broken (SIGABRT) doCheck = false; + mesonFlags = [ "-Dsystemd=true" "-Dcompositor=${phoc}/bin/phoc" ]; + postUnpack = '' rmdir $sourceRoot/subprojects/gvc ln -s ${gvc} $sourceRoot/subprojects/gvc @@ -123,15 +105,11 @@ in stdenv.mkDerivation rec { runHook postCheck ''; - # Replace the launcher script with ours - postInstall = '' - substituteAll ${executable} $out/bin/phosh - ''; - # Depends on GSettings schemas in gnome-shell preFixup = '' gappsWrapperArgs+=( --prefix XDG_DATA_DIRS : "${gnome.gnome-shell}/share/gsettings-schemas/${gnome.gnome-shell.name}" + --set GNOME_SESSION "${gnome.gnome-session}/bin/gnome-session" ) ''; diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/river/default.nix b/third_party/nixpkgs/pkgs/applications/window-managers/river/default.nix index 5c02484236..6fbcf1b287 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/river/default.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/river/default.nix @@ -18,13 +18,13 @@ stdenv.mkDerivation rec { pname = "river"; - version = "unstable-2021-05-07"; + version = "unstable-2021-06-06"; src = fetchFromGitHub { owner = "ifreund"; repo = pname; - rev = "7ffa2f4b9e7abf7d152134f555373c2b63ccfc1d"; - sha256 = "1z5qjid73lfn654f2k74nwgvpr88fpdfpbzhihybx9cyy1mqfz7j"; + rev = "0e9dc089d14e2b5c923d483c62d342af29493cf0"; + sha256 = "sha256-2rIZYr9Y+IBrox5MVrPpHeI8OVSXHsMZmcCagsX56lU="; fetchSubmodules = true; }; @@ -50,7 +50,7 @@ stdenv.mkDerivation rec { installPhase = '' runHook preInstall - zig build -Drelease-safe -Dtarget=${stdenv.hostPlatform.parsed.cpu.name}-native -Dxwayland -Dman-pages --prefix $out install + zig build -Drelease-safe -Dcpu=baseline -Dxwayland -Dman-pages --prefix $out install runHook postInstall ''; diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/sway/bg.nix b/third_party/nixpkgs/pkgs/applications/window-managers/sway/bg.nix index 57b81c7831..c274053079 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/sway/bg.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/sway/bg.nix @@ -1,6 +1,7 @@ { lib, stdenv, fetchFromGitHub , meson, ninja, pkg-config, scdoc , wayland, wayland-protocols, cairo, gdk-pixbuf +, wayland-scanner }: stdenv.mkDerivation rec { @@ -14,7 +15,7 @@ stdenv.mkDerivation rec { sha256 = "1lmqz5bmig90gq2m7lwf02d2g7z4hzf8fhqz78c8vk92c6p4xwbc"; }; - nativeBuildInputs = [ meson ninja pkg-config scdoc ]; + nativeBuildInputs = [ meson ninja pkg-config scdoc wayland-scanner ]; buildInputs = [ wayland wayland-protocols cairo gdk-pixbuf ]; mesonFlags = [ diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/sway/default.nix b/third_party/nixpkgs/pkgs/applications/window-managers/sway/default.nix index 03abea94a2..4e91c35146 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/sway/default.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/sway/default.nix @@ -10,13 +10,13 @@ stdenv.mkDerivation rec { pname = "sway-unwrapped"; - version = "1.6"; + version = "1.6.1"; src = fetchFromGitHub { owner = "swaywm"; repo = "sway"; rev = version; - sha256 = "0vnplva11yafhbijrk68wy7pw0psn9jm0caaymswq1s951xsn1c8"; + sha256 = "0j4sdbsrlvky1agacc0pcz9bwmaxjmrapjnzscbd2i0cria2fc5j"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/wayfire/default.nix b/third_party/nixpkgs/pkgs/applications/window-managers/wayfire/default.nix index 42b376a97f..120ff6cf69 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/wayfire/default.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/wayfire/default.nix @@ -1,23 +1,26 @@ -{ stdenv, lib, fetchurl, meson, ninja, pkg-config, git -, cairo, libdrm, libexecinfo, libinput, libjpeg, libxkbcommon, wayland +{ lib, stdenv, fetchurl, cmake, meson, ninja, pkg-config +, cairo, doctest, libdrm, libexecinfo, libinput, libjpeg, libxkbcommon, wayland , wayland-protocols, wf-config, wlroots, mesa }: stdenv.mkDerivation rec { pname = "wayfire"; - version = "0.7.1"; + version = "0.7.2"; src = fetchurl { url = "https://github.com/WayfireWM/wayfire/releases/download/v${version}/wayfire-${version}.tar.xz"; - sha256 = "0wgvwbmdhn7gkdr2jl9jndgvl6w4x7ys8gmpj55gqh9b57wqhyaq"; + sha256 = "1gasijjyfl00zpy6j9hh6qpwv0sw42h9irycbnm693j3vw9mcy66"; }; - nativeBuildInputs = [ meson ninja pkg-config wayland ]; + nativeBuildInputs = [ cmake meson ninja pkg-config wayland ]; buildInputs = [ - cairo libdrm libexecinfo libinput libjpeg libxkbcommon wayland + cairo doctest libdrm libexecinfo libinput libjpeg libxkbcommon wayland wayland-protocols wf-config wlroots mesa ]; + # CMake is just used for finding doctest. + dontUseCmakeConfigure = true; + mesonFlags = [ "--sysconfdir" "/etc" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/wayfire/wf-shell.nix b/third_party/nixpkgs/pkgs/applications/window-managers/wayfire/wf-shell.nix index cc99e79fca..bd9bcb30d1 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/wayfire/wf-shell.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/wayfire/wf-shell.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, meson, ninja, pkg-config, wayland, git -, alsaLib, gtkmm3, gtk-layer-shell, pulseaudio, wayfire, wf-config +, alsa-lib, gtkmm3, gtk-layer-shell, pulseaudio, wayfire, wf-config }: stdenv.mkDerivation rec { @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ meson ninja pkg-config wayland ]; buildInputs = [ - alsaLib gtkmm3 gtk-layer-shell pulseaudio wayfire wf-config + alsa-lib gtkmm3 gtk-layer-shell pulseaudio wayfire wf-config ]; mesonFlags = [ "--sysconfdir" "/etc" ]; diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/windowmaker/dockapps/AlsaMixer-app.nix b/third_party/nixpkgs/pkgs/applications/window-managers/windowmaker/dockapps/AlsaMixer-app.nix index 43080f2eae..e22b02825b 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/windowmaker/dockapps/AlsaMixer-app.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/windowmaker/dockapps/AlsaMixer-app.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, dockapps-sources, pkg-config, libX11, libXpm, libXext, alsaLib }: +{ lib, stdenv, dockapps-sources, pkg-config, libX11, libXpm, libXext, alsa-lib }: stdenv.mkDerivation rec { pname = "AlsaMixer.app"; @@ -7,7 +7,7 @@ stdenv.mkDerivation rec { src = dockapps-sources; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ libX11 libXpm libXext alsaLib ]; + buildInputs = [ libX11 libXpm libXext alsa-lib ]; setSourceRoot = '' export sourceRoot=$(echo */${pname}) diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/wio/default.nix b/third_party/nixpkgs/pkgs/applications/window-managers/wio/default.nix index 485fd0b8a6..03ec26f6fb 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/wio/default.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/wio/default.nix @@ -19,13 +19,13 @@ stdenv.mkDerivation rec { pname = "wio"; - version = "0.0.0+unstable=2021-06-01"; + version = "0.0.0+unstable=2021-06-27"; src = fetchFromBitbucket { owner = "anderson_torres"; repo = pname; - rev = "ad57eb45ba0459cd0b16ba486cb6e01626079c29"; - sha256 = "sha256-mCggAscQ+Ej3SNwhA6QxecV1nH6Rw8RDf8yAsbadqjE="; + rev = "e0b258777995055d69e61a0246a6a64985743f42"; + sha256 = "sha256-8H9fOnZsNjjq9XvOv68F4RRglGNluxs5/jp/h4ROLiI="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/applications/window-managers/yabar/build.nix b/third_party/nixpkgs/pkgs/applications/window-managers/yabar/build.nix index ec15f7e362..f9b5d227b0 100644 --- a/third_party/nixpkgs/pkgs/applications/window-managers/yabar/build.nix +++ b/third_party/nixpkgs/pkgs/applications/window-managers/yabar/build.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, cairo, gdk-pixbuf, libconfig, pango, pkg-config -, xcbutilwm, alsaLib, wirelesstools, asciidoc, libxslt, makeWrapper, docbook_xsl +, xcbutilwm, alsa-lib, wirelesstools, asciidoc, libxslt, makeWrapper, docbook_xsl , configFile ? null, lib , rev, sha256, version, patches ? [] }: @@ -22,7 +22,7 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkg-config ]; buildInputs = [ cairo gdk-pixbuf libconfig pango xcbutilwm docbook_xsl - alsaLib wirelesstools asciidoc libxslt makeWrapper + alsa-lib wirelesstools asciidoc libxslt makeWrapper ]; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/build-support/appimage/default.nix b/third_party/nixpkgs/pkgs/build-support/appimage/default.nix index 3a820853b1..6ba5890885 100644 --- a/third_party/nixpkgs/pkgs/build-support/appimage/default.nix +++ b/third_party/nixpkgs/pkgs/build-support/appimage/default.nix @@ -171,7 +171,7 @@ rec { librsvg xorg.libXft libvdpau - alsaLib + alsa-lib harfbuzz e2fsprogs diff --git a/third_party/nixpkgs/pkgs/build-support/bintools-wrapper/default.nix b/third_party/nixpkgs/pkgs/build-support/bintools-wrapper/default.nix index bf81d00e5e..5d2f2f977a 100644 --- a/third_party/nixpkgs/pkgs/build-support/bintools-wrapper/default.nix +++ b/third_party/nixpkgs/pkgs/build-support/bintools-wrapper/default.nix @@ -14,7 +14,9 @@ if libc == null then null else if stdenvNoCC.targetPlatform.isNetBSD then - if libc != targetPackages.netbsdCross.headers then + if !(targetPackages ? netbsdCross) then + netbsd.ld_elf_so + else if libc != targetPackages.netbsdCross.headers then targetPackages.netbsdCross.ld_elf_so else null diff --git a/third_party/nixpkgs/pkgs/build-support/bintools-wrapper/ld-wrapper.sh b/third_party/nixpkgs/pkgs/build-support/bintools-wrapper/ld-wrapper.sh index e54dd6f471..2f96480f80 100644 --- a/third_party/nixpkgs/pkgs/build-support/bintools-wrapper/ld-wrapper.sh +++ b/third_party/nixpkgs/pkgs/build-support/bintools-wrapper/ld-wrapper.sh @@ -20,15 +20,25 @@ if [ -z "${NIX_BINTOOLS_WRAPPER_FLAGS_SET_@suffixSalt@:-}" ]; then source @out@/nix-support/add-flags.sh fi -setDynamicLinker=1 # Optionally filter out paths not refering to the store. expandResponseParams "$@" + +# NIX_LINK_TYPE is set if ld has been called through our cc wrapper. We take +# advantage of this to avoid both recalculating it, and also repeating other +# processing cc wrapper has already done. +if [[ -n "${NIX_LINK_TYPE_@suffixSalt@:-}" ]]; then + linkType=$NIX_LINK_TYPE_@suffixSalt@ +else + linkType=$(checkLinkType "$@") +fi + if [[ "${NIX_ENFORCE_PURITY:-}" = 1 && -n "${NIX_STORE:-}" - && ( -z "$NIX_IGNORE_LD_THROUGH_GCC_@suffixSalt@" || -z "${NIX_LDFLAGS_SET_@suffixSalt@:-}" ) ]]; then + && ( -z "$NIX_IGNORE_LD_THROUGH_GCC_@suffixSalt@" || -z "${NIX_LINK_TYPE_@suffixSalt@:-}" ) ]]; then rest=() nParams=${#params[@]} declare -i n=0 + while (( "$n" < "$nParams" )); do p=${params[n]} p2=${params[n+1]:-} # handle `p` being last one @@ -48,11 +58,6 @@ if [[ "${NIX_ENFORCE_PURITY:-}" = 1 && -n "${NIX_STORE:-}" # Our ld is not built with sysroot support (Can we fix that?) : else - if [[ "$p" = -static || "$p" = -static-pie ]]; then - # Using a dynamic linker for static binaries can lead to crashes. - # This was observed for rust binaries. - setDynamicLinker=0 - fi rest+=("$p") fi n+=1 @@ -61,22 +66,24 @@ if [[ "${NIX_ENFORCE_PURITY:-}" = 1 && -n "${NIX_STORE:-}" params=(${rest+"${rest[@]}"}) fi + source @out@/nix-support/add-hardening.sh extraAfter=() extraBefore=(${hardeningLDFlags[@]+"${hardeningLDFlags[@]}"}) -if [ -z "${NIX_LDFLAGS_SET_@suffixSalt@:-}" ]; then - extraAfter+=($NIX_LDFLAGS_@suffixSalt@) - extraBefore+=($NIX_LDFLAGS_BEFORE_@suffixSalt@) +if [ -z "${NIX_LINK_TYPE_@suffixSalt@:-}" ]; then + extraAfter+=($(filterRpathFlags "$linkType" $NIX_LDFLAGS_@suffixSalt@)) + extraBefore+=($(filterRpathFlags "$linkType" $NIX_LDFLAGS_BEFORE_@suffixSalt@)) + # By adding dynamic linker to extraBefore we allow the users set their # own dynamic linker as NIX_LD_FLAGS will override earlier set flags - if [[ "$setDynamicLinker" = 1 && -n "$NIX_DYNAMIC_LINKER_@suffixSalt@" ]]; then + if [[ "$linkType" == dynamic && -n "$NIX_DYNAMIC_LINKER_@suffixSalt@" ]]; then extraBefore+=("-dynamic-linker" "$NIX_DYNAMIC_LINKER_@suffixSalt@") fi fi -extraAfter+=($NIX_LDFLAGS_AFTER_@suffixSalt@) +extraAfter+=($(filterRpathFlags "$linkType" $NIX_LDFLAGS_AFTER_@suffixSalt@)) # These flags *must not* be pulled up to -Wl, flags, so they can't go in # add-flags.sh. They must always be set, so must not be disabled by @@ -173,7 +180,7 @@ do prev="$p" done -if [[ "$link32" = "1" && "$setDynamicLinker" = 1 && -e "@out@/nix-support/dynamic-linker-m32" ]]; then +if [[ "$link32" == "1" && "$linkType" == dynamic && -e "@out@/nix-support/dynamic-linker-m32" ]]; then # We have an alternate 32-bit linker and we're producing a 32-bit ELF, let's # use it. extraAfter+=( @@ -183,7 +190,7 @@ if [[ "$link32" = "1" && "$setDynamicLinker" = 1 && -e "@out@/nix-support/dynami fi # Add all used dynamic libraries to the rpath. -if [ "$NIX_DONT_SET_RPATH_@suffixSalt@" != 1 ]; then +if [[ "$NIX_DONT_SET_RPATH_@suffixSalt@" != 1 && "$linkType" != static-pie ]]; then # For each directory in the library search path (-L...), # see if it contains a dynamic library used by a -l... flag. If # so, add the directory to the rpath. diff --git a/third_party/nixpkgs/pkgs/build-support/build-bazel-package/default.nix b/third_party/nixpkgs/pkgs/build-support/build-bazel-package/default.nix index 502be398ea..198b9c3f61 100644 --- a/third_party/nixpkgs/pkgs/build-support/build-bazel-package/default.nix +++ b/third_party/nixpkgs/pkgs/build-support/build-bazel-package/default.nix @@ -35,7 +35,7 @@ args@{ # required for the build as configured, rather than fetching all the dependencies # which may not work in some situations (e.g. Java code which ends up relying on # Debian-specific /usr/share/java paths, but doesn't in the configured build). -, fetchConfigured ? false +, fetchConfigured ? true # Don’t add Bazel --copt and --linkopt from NIX_CFLAGS_COMPILE / # NIX_LDFLAGS. This is necessary when using a custom toolchain which diff --git a/third_party/nixpkgs/pkgs/build-support/build-pecl.nix b/third_party/nixpkgs/pkgs/build-support/build-pecl.nix index d3a8cc54a1..8168c7a3de 100644 --- a/third_party/nixpkgs/pkgs/build-support/build-pecl.nix +++ b/third_party/nixpkgs/pkgs/build-support/build-pecl.nix @@ -2,12 +2,12 @@ { pname , version -, internalDeps ? [] -, peclDeps ? [] -, buildInputs ? [] -, nativeBuildInputs ? [] +, internalDeps ? [ ] +, peclDeps ? [ ] +, buildInputs ? [ ] +, nativeBuildInputs ? [ ] , postPhpize ? "" -, makeFlags ? [] +, makeFlags ? [ ] , src ? fetchurl { url = "http://pecl.php.net/get/${pname}-${version}.tgz"; inherit (args) sha256; diff --git a/third_party/nixpkgs/pkgs/build-support/cc-wrapper/cc-wrapper.sh b/third_party/nixpkgs/pkgs/build-support/cc-wrapper/cc-wrapper.sh index 2e62aef460..aa25de3364 100644 --- a/third_party/nixpkgs/pkgs/build-support/cc-wrapper/cc-wrapper.sh +++ b/third_party/nixpkgs/pkgs/build-support/cc-wrapper/cc-wrapper.sh @@ -29,9 +29,10 @@ cc1=0 cxxInclude=1 cxxLibrary=1 cInclude=1 -setDynamicLinker=1 expandResponseParams "$@" +linkType=$(checkLinkType "$@") + declare -i n=0 nParams=${#params[@]} while (( "$n" < "$nParams" )); do @@ -60,8 +61,6 @@ while (( "$n" < "$nParams" )); do cxxInclude=0 elif [ "$p" = -nostdinc++ ]; then cxxInclude=0 - elif [[ "$p" = -static || "$p" = -static-pie ]]; then - setDynamicLinker=0 elif [[ "$p" != -?* ]]; then # A dash alone signifies standard input; it is not a flag nonFlagArgs=1 @@ -151,24 +150,24 @@ if [ "$dontLink" != 1 ]; then # Add the flags that should only be passed to the compiler when # linking. - extraAfter+=($NIX_CFLAGS_LINK_@suffixSalt@) + extraAfter+=($(filterRpathFlags "$linkType" $NIX_CFLAGS_LINK_@suffixSalt@)) # Add the flags that should be passed to the linker (and prevent # `ld-wrapper' from adding NIX_LDFLAGS_@suffixSalt@ again). - for i in $NIX_LDFLAGS_BEFORE_@suffixSalt@; do + for i in $(filterRpathFlags "$linkType" $NIX_LDFLAGS_BEFORE_@suffixSalt@); do extraBefore+=("-Wl,$i") done - if [[ "$setDynamicLinker" = 1 && -n "$NIX_DYNAMIC_LINKER_@suffixSalt@" ]]; then + if [[ "$linkType" == dynamic && -n "$NIX_DYNAMIC_LINKER_@suffixSalt@" ]]; then extraBefore+=("-Wl,-dynamic-linker=$NIX_DYNAMIC_LINKER_@suffixSalt@") fi - for i in $NIX_LDFLAGS_@suffixSalt@; do + for i in $(filterRpathFlags "$linkType" $NIX_LDFLAGS_@suffixSalt@); do if [ "${i:0:3}" = -L/ ]; then extraAfter+=("$i") else extraAfter+=("-Wl,$i") fi done - export NIX_LDFLAGS_SET_@suffixSalt@=1 + export NIX_LINK_TYPE_@suffixSalt@=$linkType fi # As a very special hack, if the arguments are just `-v', then don't diff --git a/third_party/nixpkgs/pkgs/build-support/coq/default.nix b/third_party/nixpkgs/pkgs/build-support/coq/default.nix index 03922303ee..ba300f2f8c 100644 --- a/third_party/nixpkgs/pkgs/build-support/coq/default.nix +++ b/third_party/nixpkgs/pkgs/build-support/coq/default.nix @@ -57,7 +57,7 @@ let append-version = p: n: p + display-pkg n "" coqPackages.${n}.version + "-"; prefix-name = foldl append-version "" namePrefix; var-coqlib-install = (optionalString (versions.isGe "8.7" coq.coq-version) "COQMF_") + "COQLIB"; - useDune2 = args.useDune2 or useDune2ifVersion fetched.version; + useDune2 = args.useDune2 or (useDune2ifVersion fetched.version); in stdenv.mkDerivation (removeAttrs ({ diff --git a/third_party/nixpkgs/pkgs/build-support/docker/examples.nix b/third_party/nixpkgs/pkgs/build-support/docker/examples.nix index de90eab3ea..f890d0a77a 100644 --- a/third_party/nixpkgs/pkgs/build-support/docker/examples.nix +++ b/third_party/nixpkgs/pkgs/build-support/docker/examples.nix @@ -91,7 +91,7 @@ rec { nixFromDockerHub = pullImage { imageName = "nixos/nix"; imageDigest = "sha256:85299d86263a3059cf19f419f9d286cc9f06d3c13146a8ebbb21b3437f598357"; - sha256 = "07q9y9r7fsd18sy95ybrvclpkhlal12d30ybnf089hq7v1hgxbi7"; + sha256 = "19fw0n3wmddahzr20mhdqv6jkjn1kanh6n2mrr08ai53dr8ph5n7"; finalImageTag = "2.2.1"; finalImageName = "nix"; }; diff --git a/third_party/nixpkgs/pkgs/build-support/ocaml/dune.nix b/third_party/nixpkgs/pkgs/build-support/ocaml/dune.nix index 56fe8a6048..c049878d01 100644 --- a/third_party/nixpkgs/pkgs/build-support/ocaml/dune.nix +++ b/third_party/nixpkgs/pkgs/build-support/ocaml/dune.nix @@ -4,8 +4,8 @@ let Dune = if args.useDune2 or false then dune_2 else dune_1; in -if args ? minimumOCamlVersion && - ! lib.versionAtLeast ocaml.version args.minimumOCamlVersion +if (args ? minimumOCamlVersion && ! lib.versionAtLeast ocaml.version args.minimumOCamlVersion) || + (args ? minimalOCamlVersion && ! lib.versionAtLeast ocaml.version args.minimalOCamlVersion) then throw "${pname}-${version} is not available for OCaml ${ocaml.version}" else @@ -29,7 +29,7 @@ stdenv.mkDerivation ({ runHook postInstall ''; -} // args // { +} // (builtins.removeAttrs args [ "minimalOCamlVersion" ]) // { name = "ocaml${ocaml.version}-${pname}-${version}"; diff --git a/third_party/nixpkgs/pkgs/build-support/pkg-config-wrapper/add-flags.sh b/third_party/nixpkgs/pkgs/build-support/pkg-config-wrapper/add-flags.sh index 35ecf62ca2..90aee712be 100644 --- a/third_party/nixpkgs/pkgs/build-support/pkg-config-wrapper/add-flags.sh +++ b/third_party/nixpkgs/pkgs/build-support/pkg-config-wrapper/add-flags.sh @@ -6,7 +6,7 @@ var_templates_list=( accumulateRoles for var in "${var_templates_list[@]}"; do - mangleVarList "$var" ${role_suffixes[@]+"${role_suffixes[@]}"} + mangleVarListGeneric ":" "$var" ${role_suffixes[@]+"${role_suffixes[@]}"} done export NIX_PKG_CONFIG_WRAPPER_FLAGS_SET_@suffixSalt@=1 diff --git a/third_party/nixpkgs/pkgs/build-support/skaware/build-skaware-package.nix b/third_party/nixpkgs/pkgs/build-support/skaware/build-skaware-package.nix index 7a5db942b2..b27b65f48a 100644 --- a/third_party/nixpkgs/pkgs/build-support/skaware/build-skaware-package.nix +++ b/third_party/nixpkgs/pkgs/build-support/skaware/build-skaware-package.nix @@ -99,7 +99,7 @@ in stdenv.mkDerivation { inherit description platforms; license = lib.licenses.isc; maintainers = with lib.maintainers; - [ pmahoney Profpatsch ] ++ maintainers; + [ pmahoney Profpatsch qyliss ] ++ maintainers; }; } diff --git a/third_party/nixpkgs/pkgs/build-support/trivial-builders.nix b/third_party/nixpkgs/pkgs/build-support/trivial-builders.nix index 0bf67d21b3..219f808403 100644 --- a/third_party/nixpkgs/pkgs/build-support/trivial-builders.nix +++ b/third_party/nixpkgs/pkgs/build-support/trivial-builders.nix @@ -571,6 +571,22 @@ rec { installPhase = "cp -R ./ $out"; }; + /* An immutable file in the store with a length of 0 bytes. */ + emptyFile = runCommand "empty-file" { + outputHashAlgo = "sha256"; + outputHashMode = "recursive"; + outputHash = "0ip26j2h11n1kgkz36rl4akv694yz65hr72q4kv4b3lxcbi65b3p"; + preferLocalBuild = true; + } "touch $out"; + + /* An immutable empty directory in the store. */ + emptyDirectory = runCommand "empty-directory" { + outputHashAlgo = "sha256"; + outputHashMode = "recursive"; + outputHash = "0sjjj9z1dhilhpc8pq4154czrb79z9cm044jvn75kxcjv6v5l2m5"; + preferLocalBuild = true; + } "mkdir $out"; + /* Checks the command output contains the specified version * * Although simplistic, this test assures that the main program diff --git a/third_party/nixpkgs/pkgs/build-support/trivial-builders/test/sample.nix b/third_party/nixpkgs/pkgs/build-support/trivial-builders/test/sample.nix index 060be01109..27aee6b73d 100644 --- a/third_party/nixpkgs/pkgs/build-support/trivial-builders/test/sample.nix +++ b/third_party/nixpkgs/pkgs/build-support/trivial-builders/test/sample.nix @@ -12,4 +12,8 @@ in norefs = writeText "hi" "hello"; helloRef = writeText "hi" "hello ${hello}"; helloFigletRef = writeText "hi" "hello ${hello} ${figlet}"; + inherit (pkgs) + emptyFile + emptyDirectory + ; } diff --git a/third_party/nixpkgs/pkgs/build-support/wrapper-common/utils.bash b/third_party/nixpkgs/pkgs/build-support/wrapper-common/utils.bash index 66b7c3f3e8..cb3552ebc5 100644 --- a/third_party/nixpkgs/pkgs/build-support/wrapper-common/utils.bash +++ b/third_party/nixpkgs/pkgs/build-support/wrapper-common/utils.bash @@ -13,7 +13,9 @@ accumulateRoles() { fi } -mangleVarList() { +mangleVarListGeneric() { + local sep="$1" + shift local var="$1" shift local -a role_suffixes=("$@") @@ -25,11 +27,15 @@ mangleVarList() { for suffix in "${role_suffixes[@]}"; do local inputVar="${var}${suffix}" if [ -v "$inputVar" ]; then - export ${outputVar}+="${!outputVar:+ }${!inputVar}" + export ${outputVar}+="${!outputVar:+$sep}${!inputVar}" fi done } +mangleVarList() { + mangleVarListGeneric " " "$@" +} + mangleVarBool() { local var="$1" shift @@ -123,3 +129,38 @@ expandResponseParams() { fi done } + +checkLinkType() { + local arg mode + type="dynamic" + for arg in "$@"; do + if [[ "$arg" = -static ]]; then + type="static" + elif [[ "$arg" = -static-pie ]]; then + type="static-pie" + fi + done + echo "$type" +} + +# When building static-pie executables we cannot have rpath +# set. At least glibc requires rpath to be empty +filterRpathFlags() { + local linkType=$1 ret="" i + shift + + if [[ "$linkType" == "static-pie" ]]; then + while [[ "$#" -gt 0 ]]; do + i="$1"; shift 1 + if [[ "$i" == -rpath ]]; then + # also skip its argument + shift + else + ret+="$i " + fi + done + else + ret=$@ + fi + echo $ret +} diff --git a/third_party/nixpkgs/pkgs/build-support/writers/test.nix b/third_party/nixpkgs/pkgs/build-support/writers/test.nix index 689b45a126..d0824b17bd 100644 --- a/third_party/nixpkgs/pkgs/build-support/writers/test.nix +++ b/third_party/nixpkgs/pkgs/build-support/writers/test.nix @@ -13,11 +13,11 @@ with writers; let bin = { - bash = writeBashBin "test_writers" '' + bash = writeBashBin "test-writers-bash-bin" '' if [[ "test" == "test" ]]; then echo "success"; fi ''; - c = writeCBin "test_writers" { libraries = [ ]; } '' + c = writeCBin "test-writers-c" { libraries = [ ]; } '' #include int main() { printf("success\n"); @@ -25,17 +25,17 @@ let } ''; - dash = writeDashBin "test_writers" '' + dash = writeDashBin "test-writers-dash-bin" '' test '~' = '~' && echo 'success' ''; - rust = writeRustBin "test_writers" {} '' + rust = writeRustBin "test-writers-rust-bin" {} '' fn main(){ println!("success") } ''; - haskell = writeHaskellBin "test_writers" { libraries = [ haskellPackages.acme-default ]; } '' + haskell = writeHaskellBin "test-writers-haskell-bin" { libraries = [ haskellPackages.acme-default ]; } '' import Data.Default int :: Int @@ -47,7 +47,7 @@ let _ -> print "fail" ''; - js = writeJSBin "test_writers" { libraries = [ nodePackages.semver ]; } '' + js = writeJSBin "test-writers-js-bin" { libraries = [ nodePackages.semver ]; } '' var semver = require('semver'); if (semver.valid('1.2.3')) { @@ -57,12 +57,12 @@ let } ''; - perl = writePerlBin "test_writers" { libraries = [ perlPackages.boolean ]; } '' + perl = writePerlBin "test-writers-perl-bin" { libraries = [ perlPackages.boolean ]; } '' use boolean; print "success\n" if true; ''; - python2 = writePython2Bin "test_writers" { libraries = [ python2Packages.enum ]; } '' + python2 = writePython2Bin "test-writers-python2-bin" { libraries = [ python2Packages.enum ]; } '' from enum import Enum @@ -73,7 +73,7 @@ let print Test.a ''; - python3 = writePython3Bin "test_writers" { libraries = [ python3Packages.pyyaml ]; } '' + python3 = writePython3Bin "test-writers-python3-bin" { libraries = [ python3Packages.pyyaml ]; } '' import yaml y = yaml.load(""" @@ -84,11 +84,11 @@ let }; simple = { - bash = writeBash "test_bash" '' + bash = writeBash "test-writers-bash" '' if [[ "test" == "test" ]]; then echo "success"; fi ''; - c = writeC "test_c" { libraries = [ glib.dev ]; } '' + c = writeC "test-writers-c" { libraries = [ glib.dev ]; } '' #include #include int main() { @@ -106,11 +106,11 @@ let } ''; - dash = writeDash "test_dash" '' + dash = writeDash "test-writers-dash" '' test '~' = '~' && echo 'success' ''; - haskell = writeHaskell "test_haskell" { libraries = [ haskellPackages.acme-default ]; } '' + haskell = writeHaskell "test-writers-haskell" { libraries = [ haskellPackages.acme-default ]; } '' import Data.Default int :: Int @@ -122,7 +122,7 @@ let _ -> print "fail" ''; - js = writeJS "test_js" { libraries = [ nodePackages.semver ]; } '' + js = writeJS "test-writers-js" { libraries = [ nodePackages.semver ]; } '' var semver = require('semver'); if (semver.valid('1.2.3')) { @@ -132,12 +132,12 @@ let } ''; - perl = writePerl "test_perl" { libraries = [ perlPackages.boolean ]; } '' + perl = writePerl "test-writers-perl" { libraries = [ perlPackages.boolean ]; } '' use boolean; print "success\n" if true; ''; - python2 = writePython2 "test_python2" { libraries = [ python2Packages.enum ]; } '' + python2 = writePython2 "test-writers-python2" { libraries = [ python2Packages.enum ]; } '' from enum import Enum @@ -148,7 +148,7 @@ let print Test.a ''; - python3 = writePython3 "test_python3" { libraries = [ python3Packages.pyyaml ]; } '' + python3 = writePython3 "test-writers-python3" { libraries = [ python3Packages.pyyaml ]; } '' import yaml y = yaml.load(""" @@ -157,21 +157,21 @@ let print(y[0]['test']) ''; - python2NoLibs = writePython2 "test_python2_no_libs" {} '' + python2NoLibs = writePython2 "test-writers-python2-no-libs" {} '' print("success") ''; - python3NoLibs = writePython3 "test_python3_no_libs" {} '' + python3NoLibs = writePython3 "test-writers-python3-no-libs" {} '' print("success") ''; }; path = { - bash = writeBash "test_bash" (writeText "test" '' + bash = writeBash "test-writers-bash-path" (writeText "test" '' if [[ "test" == "test" ]]; then echo "success"; fi ''); - haskell = writeHaskell "test_haskell" { libraries = [ haskellPackages.acme-default ]; } (writeText "test" '' + haskell = writeHaskell "test-writers-haskell-path" { libraries = [ haskellPackages.acme-default ]; } (writeText "test" '' import Data.Default int :: Int @@ -184,8 +184,8 @@ let ''); }; - writeTest = expectedValue: test: - writeDash "test-writers" '' + writeTest = expectedValue: name: test: + writeDash "run-${name}" '' if test "$(${test})" != "${expectedValue}"; then echo 'test ${test} failed' exit 1 @@ -196,9 +196,9 @@ in runCommand "test-writers" { passthru = { inherit writeTest bin simple; }; meta.platforms = lib.platforms.all; } '' - ${lib.concatMapStringsSep "\n" (test: writeTest "success" "${test}/bin/test_writers") (lib.attrValues bin)} - ${lib.concatMapStringsSep "\n" (test: writeTest "success" test) (lib.attrValues simple)} - ${lib.concatMapStringsSep "\n" (test: writeTest "success" test) (lib.attrValues path)} + ${lib.concatMapStringsSep "\n" (test: writeTest "success" test.name "${test}/bin/${test.name}") (lib.attrValues bin)} + ${lib.concatMapStringsSep "\n" (test: writeTest "success" test.name test) (lib.attrValues simple)} + ${lib.concatMapStringsSep "\n" (test: writeTest "success" test.name test) (lib.attrValues path)} echo 'nix-writers successfully tested' >&2 touch $out diff --git a/third_party/nixpkgs/pkgs/common-updater/unstable-updater.nix b/third_party/nixpkgs/pkgs/common-updater/unstable-updater.nix index d315c1027a..01f8ae2533 100644 --- a/third_party/nixpkgs/pkgs/common-updater/unstable-updater.nix +++ b/third_party/nixpkgs/pkgs/common-updater/unstable-updater.nix @@ -1,4 +1,5 @@ -{ writeShellScript +{ lib +, writeShellScript , coreutils , git , nix @@ -8,6 +9,7 @@ # This is an updater for unstable packages that should always use the latest # commit. { url ? null # The git url, if empty it will be set to src.url +, branch ? null }: let @@ -25,7 +27,9 @@ let # Get info about HEAD from a shallow git clone tmpdir="$(${coreutils}/bin/mktemp -d)" - ${git}/bin/git clone --bare --depth=1 "$url" "$tmpdir" + ${git}/bin/git clone --bare --depth=1 \ + ${lib.optionalString (branch != null) "--branch ${branch}"} \ + "$url" "$tmpdir" pushd "$tmpdir" commit_date="$(${git}/bin/git show -s --pretty='format:%cs')" commit_sha="$(${git}/bin/git show -s --pretty='format:%H')" diff --git a/third_party/nixpkgs/pkgs/data/fonts/dina/default.nix b/third_party/nixpkgs/pkgs/data/fonts/dina/default.nix index 2a770222ed..3b5d75acb5 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/dina/default.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/dina/default.nix @@ -1,53 +1,59 @@ { lib, stdenv, fetchurl, unzip -, bdftopcf, mkfontscale, fontforge +, bdftopcf, mkfontscale, fonttosfnt }: stdenv.mkDerivation { pname = "dina-font"; version = "2.92"; + outputs = [ "out" "bdf" ]; + src = fetchurl { url = "http://www.donationcoder.com/Software/Jibz/Dina/downloads/Dina.zip"; sha256 = "1kq86lbxxgik82aywwhawmj80vsbz3hfhdyhicnlv9km7yjvnl8z"; }; nativeBuildInputs = - [ unzip bdftopcf mkfontscale fontforge ]; + [ unzip bdftopcf mkfontscale fonttosfnt ]; - patchPhase = "sed -i 's/microsoft-cp1252/ISO8859-1/' *.bdf"; + postPatch = '' + sed -i 's/microsoft-cp1252/ISO8859-1/' *.bdf + ''; buildPhase = '' + runHook preBuild + newName() { - test "''${1:5:1}" = i && _it=Italic || _it= - case ''${1:6:3} in - 400) test -z $it && _weight=Medium ;; - 700) _weight=Bold ;; - esac - _pt=''${1%.bdf} - _pt=''${_pt#*-} - echo "Dina$_weight$_it$_pt" + test "''${1:5:1}" = i && _it=Italic || _it= + case ''${1:6:3} in + 400) test -z $it && _weight=Medium ;; + 700) _weight=Bold ;; + esac + _pt=''${1%.bdf} + _pt=''${_pt#*-} + echo "Dina$_weight$_it$_pt" } - # convert bdf fonts to pcf - for i in *.bdf; do - bdftopcf -t -o $(newName "$i").pcf "$i" + for f in *.bdf; do + name=$(newName "$f") + bdftopcf -t -o "$name.pcf" "$f" + fonttosfnt -v -o "$name.otb" "$f" done gzip -n -9 *.pcf - # convert bdf fonts to otb - for i in *.bdf; do - fontforge -lang=ff -c "Open(\"$i\"); Generate(\"$(newName $i).otb\")" - done + runHook postBuild ''; installPhase = '' + runHook preInstall + install -D -m 644 -t "$out/share/fonts/misc" *.pcf.gz *.otb install -D -m 644 -t "$bdf/share/fonts/misc" *.bdf mkfontdir "$out/share/fonts/misc" mkfontdir "$bdf/share/fonts/misc" - ''; - outputs = [ "out" "bdf" ]; + runHook postInstall + ''; meta = with lib; { description = "A monospace bitmap font aimed at programmers"; diff --git a/third_party/nixpkgs/pkgs/data/fonts/efont-unicode/default.nix b/third_party/nixpkgs/pkgs/data/fonts/efont-unicode/default.nix new file mode 100644 index 0000000000..f4ea61cbc9 --- /dev/null +++ b/third_party/nixpkgs/pkgs/data/fonts/efont-unicode/default.nix @@ -0,0 +1,54 @@ +{ lib, stdenv, fetchzip, libfaketime, xorg }: + +stdenv.mkDerivation rec { + pname = "efont-unicode"; + version = "0.4.2"; + + src = fetchzip { + url = "http://openlab.ring.gr.jp/efont/dist/unicode-bdf/${pname}-bdf-${version}.tar.bz2"; + sha256 = "0bib3jgikq8s1m96imw4mlgbl5cbq1bs5sqig74s2l2cdfx3jaqc"; + }; + + nativeBuildInputs = with xorg; + [ libfaketime bdftopcf fonttosfnt mkfontscale ]; + + buildPhase = '' + runHook preBuild + + # convert bdf fonts to pcf + for f in *.bdf; do + bdftopcf -t -o "''${f%.bdf}.pcf" "$f" + done + gzip -n -9 *.pcf + + # convert bdf fonts to otb + for f in *.bdf; do + faketime -f "1970-01-01 00:00:01" \ + fonttosfnt -v -m 2 -o "''${f%.bdf}.otb" "$f" + done + + runHook postBuild + ''; + + installPhase = '' + runHook preInstall + + dir=share/fonts/misc + install -D -m 644 -t "$out/$dir" *.otb *.pcf.gz + install -D -m 644 -t "$bdf/$dir" *.bdf + mkfontdir "$out/$dir" + mkfontdir "$bdf/$dir" + + runHook postInstall + ''; + + outputs = [ "out" "bdf" ]; + + meta = with lib; { + description = "The /efont/ Unicode bitmap font"; + homepage = "http://openlab.ring.gr.jp/efont/unicode/"; + license = licenses.bsd3; + platforms = platforms.all; + maintainers = [ maintainers.ncfavier ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/data/fonts/emacs-all-the-icons-fonts/default.nix b/third_party/nixpkgs/pkgs/data/fonts/emacs-all-the-icons-fonts/default.nix index e9c646d32d..2f7a804ad0 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/emacs-all-the-icons-fonts/default.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/emacs-all-the-icons-fonts/default.nix @@ -1,7 +1,7 @@ { lib, fetchzip }: let - version = "3.2.0"; + version = "5.0.0"; in fetchzip { name = "emacs-all-the-icons-fonts-${version}"; @@ -12,7 +12,7 @@ in fetchzip { unzip -j $downloadedFile \*.ttf -d $out/share/fonts/all-the-icons ''; - sha256 = "0ps8q9nkx67ivgn8na4s012360v36jwr0951rsg7j6dyyw9g41jq"; + sha256 = "0vc9bkm4pcc05llcd2c9zr3d88h3zmci0izla5wnw8hg1n0rsrii"; meta = with lib; { description = "Icon fonts for emacs all-the-icons"; diff --git a/third_party/nixpkgs/pkgs/data/fonts/google-fonts/default.nix b/third_party/nixpkgs/pkgs/data/fonts/google-fonts/default.nix index 210902a0e7..9689fddd39 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/google-fonts/default.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/google-fonts/default.nix @@ -1,22 +1,18 @@ -{ lib -, stdenv -, fetchFromGitHub }: +{ lib, stdenvNoCC, fetchFromGitHub }: -stdenv.mkDerivation { +stdenvNoCC.mkDerivation { pname = "google-fonts"; - version = "unstable-2021-01-19"; + version = "unstable-2021-06-12"; outputs = [ "out" "adobeBlank" ]; src = fetchFromGitHub { owner = "google"; repo = "fonts"; - rev = "a3a831f0fe44cd58465c6937ea06873728f2ba0d"; - sha256 = "19abx2bj7mkysv2ihr43m3kpyf6kv6v2qjlm1skxc82rb72xqhix"; + rev = "370c795d7e5f9b02db9a793c2779e2c8f94c6adc"; + sha256 = "sha256-XKjxmupY2KuefCtKZMXWaba1TnNwdYM/P0xGXOtBGmM="; }; - phases = [ "unpackPhase" "patchPhase" "installPhase" ]; - patchPhase = '' # These directories need to be removed because they contain # older or duplicate versions of fonts also present in other @@ -33,6 +29,8 @@ stdenv.mkDerivation { fi ''; + dontBuild = true; + installPhase = '' adobeBlankDest=$adobeBlank/share/fonts/truetype install -m 444 -Dt $adobeBlankDest ofl/adobeblank/AdobeBlank-Regular.ttf diff --git a/third_party/nixpkgs/pkgs/data/fonts/inter/default.nix b/third_party/nixpkgs/pkgs/data/fonts/inter/default.nix index 00117840cd..ca01acd0c5 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/inter/default.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/inter/default.nix @@ -1,7 +1,7 @@ { lib, fetchzip }: let - version = "3.18"; + version = "3.19"; in fetchzip { name = "inter-${version}"; @@ -12,7 +12,7 @@ in fetchzip { unzip -j $downloadedFile \*.otf -d $out/share/fonts/opentype ''; - sha256 = "sha256-+wbN1vSS8v1Z1VIfDNeY9DB8Kr6v7UnFg37EPPAD7wI="; + sha256 = "sha256-8p15thg3xyvCA/8dH2jGQoc54nzESFDyv5m47FgWrSI="; meta = with lib; { homepage = "https://rsms.me/inter/"; diff --git a/third_party/nixpkgs/pkgs/data/fonts/iosevka/bin.nix b/third_party/nixpkgs/pkgs/data/fonts/iosevka/bin.nix index 26d67ba170..b399741f93 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/iosevka/bin.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/iosevka/bin.nix @@ -10,7 +10,7 @@ let (builtins.attrNames (builtins.removeAttrs variantHashes [ "iosevka" ])); in stdenv.mkDerivation rec { pname = "${name}-bin"; - version = "5.0.5"; + version = "7.0.4"; src = fetchurl { url = "https://github.com/be5invis/Iosevka/releases/download/v${version}/ttc-${name}-${version}.zip"; diff --git a/third_party/nixpkgs/pkgs/data/fonts/iosevka/variants.nix b/third_party/nixpkgs/pkgs/data/fonts/iosevka/variants.nix index 6c31d3edb7..1f3da2a205 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/iosevka/variants.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/iosevka/variants.nix @@ -1,26 +1,27 @@ # This file was autogenerated. DO NOT EDIT! { - iosevka = "1fva80sxdcmsl8y3m23ndif3ff54if37g1xqpda1f13yrbd9ii8q"; - iosevka-aile = "0fy58yd17k8k41j5f48572d4vad3zz7c2mbc6vsiii9abfkwwalr"; - iosevka-curly = "1lxw8na3qvc5g04prczl7qprdkvd0zf91ybmv276dnkq27abnjn4"; - iosevka-curly-slab = "19b6xr5vjnb20j34x2ynfji63qibczn0mm2j76d01py304839bws"; - iosevka-etoile = "0fhcn69idb6w8abpmmvpdp9c08zdhy0zwn8nbyy9jcznwj8vwb7m"; - iosevka-slab = "0jlm3l13p9c965zx6z4df65lzxzj9yjjvpwlnx94ipayinxa1iff"; - iosevka-ss01 = "1i6bvslpxj87p3xi198l486ba40ixicdkmj29vcb1d7w1hhr6wnm"; - iosevka-ss02 = "1raczi1ja4barvjg5cp3j96kyph4aj8qlp9i10q7835sy29q3285"; - iosevka-ss03 = "0cn9hi5w9rx8xhbh9a75c7s9pxa3dkqfhd24lbp72hwfgv5nk1v0"; - iosevka-ss04 = "0v8fvif71604vyqanphq9mmlmx4xy0y2bykvplhrj1zmrj6v2ing"; - iosevka-ss05 = "1fh99av3ml2zhjvdif02r2f82n4hsswpgd2i42d964swjdplxdga"; - iosevka-ss06 = "0b0kl49djpc77qpmr1g2nzrg0q477xkjiqxb2i33pkrjsxn4vhn7"; - iosevka-ss07 = "1d2by3najsambqxyzapnmd200hah39jq0mqdalidb2kjh5lx9n6k"; - iosevka-ss08 = "05m03zn9pfl1khvl9xvgmlaygh1ni67lj2pc8zjgqydyls1vmxl4"; - iosevka-ss09 = "1hzglj7sclg6h4jc9ibb1777apl11885w1gpscv81b8n1h0qhnb7"; - iosevka-ss10 = "1fr52sclgp10k0lh86scjn3aylvsfnr7msg7jfsr3bkg61f5x1da"; - iosevka-ss11 = "1cmdjmlqvhn3qvqdfflwa4wgza364jn9gbj5vq8rsd6qili175ix"; - iosevka-ss12 = "0bk56hh9894z59rpkk5s9hhmkz1b2gmvfys46frijg3am54xh03q"; - iosevka-ss13 = "1kgxlxz1cdkzrfbnkavscf48im9lwiya9rcqlaa10k0ssas28br5"; - iosevka-ss14 = "06djgn86r2yy3ll2ask5mr9qhqibqzr7v95db5dzxcbz7hrmaaxf"; - iosevka-ss15 = "0qcld7h38c7cif518sa84x50igxjkh38ckav9qhhv7ls1n5h0jpm"; - iosevka-ss16 = "0qa6h8qx60rajbpp0v4wxia5n3yinp2nvwy2dsi1270prra7r49x"; - iosevka-ss17 = "1s04vlkll42am6w3lcka518zv2dlrwwnykdid0sp81najwmq0fk3"; + iosevka = "10aa8bsykkfi3aplw4j7smj0brcbni3jxqzjbpsbv5b15wzvkm7y"; + iosevka-aile = "0pa79n41xha9rdj4vzz8cpmdhf0h4fjyphjl12i9qxh5znjr4yyz"; + iosevka-curly = "0shk75qdm5acfbxdvv985gnhaz3dys8wpshiis6y2raz8sam48qg"; + iosevka-curly-slab = "0z297s1bl2rrrmr3a4cds4cx4cw69p2y05jv999bkw9vrd6a5ij9"; + iosevka-etoile = "05h62ybd6b54b51h6m6dq3phvrw4jfcc6cyp1x44shj4az2ia17w"; + iosevka-slab = "07rp7rp3rjzzn6vnx3zbfizd924xhl702kcyq9qlif9g285l85nl"; + iosevka-ss01 = "1rvshgyhcq2cay9dssap9mhinhljn92adrbf8lbkaabf3fcyd19h"; + iosevka-ss02 = "0bscxfjhm1is7b7amr5jjj5wpxm1yps4cns47r4w26a0ad4lzf6b"; + iosevka-ss03 = "1l4mzv1w7wkjs4629hrj7svd3wwhjfvby0qsbq2fr71ngz4gdvva"; + iosevka-ss04 = "0mj5l316bji6mazgkzi5vigbfbgfnif0llmgacg0l5qayzaafqb1"; + iosevka-ss05 = "1gfc7b05fvf1m5vhlvbzxzim8qfcqf16dg8qmzdv625dk1mg2llf"; + iosevka-ss06 = "1n3mfn8h9gmf7ymc6f5ky5n70nn0nb2l8grj26hm9047cvbxcjqm"; + iosevka-ss07 = "0bffazcb6k7qd3c3fxg426mcgjzc5xncv8nsiz71frhi9crplprv"; + iosevka-ss08 = "1kv6v7n2qbgl185kfh401mjvs2iim6l3cw9zzghhfx6qv7xy0dcd"; + iosevka-ss09 = "0da9kcsxk4vllnxjlslm394lr3bhdsw4a2mi95szplipbf748jcp"; + iosevka-ss10 = "0935y7m603n3rfv38gmja7jhjmc6xrcx61psb3sznp7mlmi0dn7x"; + iosevka-ss11 = "1hh0b8qaas4bxz0sa8zi5sr4rmqrpgxfzaq53fsmxy7pzjkhjz09"; + iosevka-ss12 = "118ibl1i7981kjvf8g0rqrckh2chnxvyivk5wwmxhkw43x06ffjf"; + iosevka-ss13 = "1licqy5dy5z4s91yh086i0m362lavaqq6zr13715zaqh7ard7hva"; + iosevka-ss14 = "0y1f5hva9kpj9l3a56n6vbr8zbydd9c0knvsbpg68lcgmybfc97m"; + iosevka-ss15 = "11pm6frf74y27ym4kmh98pn2cqlab6msj0cxpah36ckpzkm5zdqq"; + iosevka-ss16 = "0z77549ydrbdhw96gc1zl3sg4s16cq7l56pwkfk9ificm1rwf1nm"; + iosevka-ss17 = "0zm34lfgrlcb97a8dx1g056qy6rr7722b1k6hm9dp676mi5va2cw"; + iosevka-ss18 = "0jmz975gny6fc7vf5cn8a4bl0y8pzdwlvfh0km9x7ijp711pw42p"; } diff --git a/third_party/nixpkgs/pkgs/data/fonts/julia-mono/default.nix b/third_party/nixpkgs/pkgs/data/fonts/julia-mono/default.nix index ba9ad48e39..014d6bd6f8 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/julia-mono/default.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/julia-mono/default.nix @@ -1,13 +1,13 @@ { lib, fetchzip }: let - version = "0.039"; + version = "0.040"; in fetchzip { name = "JuliaMono-ttf-${version}"; url = "https://github.com/cormullion/juliamono/releases/download/v${version}/JuliaMono-ttf.tar.gz"; - sha256 = "sha256-M9T78xnSN1hcHLXkut09eD2IFrgCRTG9fAPqMv4MXWY="; + sha256 = "sha256-Rrsvs682aWXZqydnOifXTJMa4uPl/aCGbVNRPGxkZng="; postFetch = '' mkdir -p $out/share/fonts/truetype diff --git a/third_party/nixpkgs/pkgs/data/fonts/open-fonts/default.nix b/third_party/nixpkgs/pkgs/data/fonts/open-fonts/default.nix new file mode 100644 index 0000000000..e503b11430 --- /dev/null +++ b/third_party/nixpkgs/pkgs/data/fonts/open-fonts/default.nix @@ -0,0 +1,28 @@ +{ lib, fetchurl }: + +let + pname = "open-fonts"; + version = "0.7.0"; +in +fetchurl { + name = "${pname}-${version}"; + + url = "https://github.com/kiwi0fruit/open-fonts/releases/download/${version}/open-fonts.tar.xz"; + downloadToTemp = true; + recursiveHash = true; + sha256 = "sha256-bSP9Flotoo3E5vRU3eKOUAPD2fmkWseWYWG4y0S07+4="; + + postFetch = '' + tar xf $downloadedFile + mkdir -p $out/share/fonts/truetype + install open-fonts/*.ttf $out/share/fonts/truetype + ''; + + meta = with lib; { + description = "A collection of beautiful free and open source fonts"; + homepage = "https://github.com/kiwi0fruit/open-fonts"; + license = licenses.mit; + platforms = platforms.all; + maintainers = with maintainers; [ fortuneteller2k ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/data/fonts/ricty/default.nix b/third_party/nixpkgs/pkgs/data/fonts/ricty/default.nix index 435cdb7d16..6bdd331c72 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/ricty/default.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/ricty/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "4.1.1"; src = fetchurl { - url = "http://www.yusa.lab.uec.ac.jp/~yusa/ricty/ricty_generator-${version}.sh"; + url = "https://rictyfonts.github.io/files/ricty_generator-${version}.sh"; sha256 = "03fngb8f5hl7ifigdm5yljhs4z2x80cq8y8kna86d07ghknhzgw6"; }; @@ -29,7 +29,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "A high-quality Japanese font based on Inconsolata and Migu 1M"; - homepage = "http://www.yusa.lab.uec.ac.jp/~yusa/ricty.html"; + homepage = "https://rictyfonts.github.io"; license = licenses.unfree; maintainers = [ maintainers.mikoim ]; }; diff --git a/third_party/nixpkgs/pkgs/data/fonts/spleen/default.nix b/third_party/nixpkgs/pkgs/data/fonts/spleen/default.nix index 4dea9253c0..162197006b 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/spleen/default.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/spleen/default.nix @@ -2,7 +2,7 @@ let pname = "spleen"; - version = "1.9.0"; + version = "1.9.1"; in fetchurl { name = "${pname}-${version}"; url = "https://github.com/fcambus/spleen/releases/download/${version}/spleen-${version}.tar.gz"; @@ -19,7 +19,7 @@ in fetchurl { # create fonts.dir so NixOS xorg module adds to fp ${mkfontscale}/bin/mkfontdir "$d" ''; - sha256 = "sha256-hNPbYiU+v7kCYKVyOn+uc5cSlu9bWsC4CwFvfH6StWM="; + sha256 = "sha256-6Imsa0ku8On63di0DOo0QxBa0t+tbtPRxM531EIiG94="; meta = with lib; { description = "Monospaced bitmap fonts"; diff --git a/third_party/nixpkgs/pkgs/data/fonts/sudo/default.nix b/third_party/nixpkgs/pkgs/data/fonts/sudo/default.nix index a1c96e7da1..322dcfd68c 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/sudo/default.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/sudo/default.nix @@ -1,11 +1,11 @@ { lib, fetchzip }: let - version = "0.53.1"; + version = "0.55.1"; in fetchzip { name = "sudo-font-${version}"; - url = "https://github.com/jenskutilek/sudo-font/raw/v${version}/dist/sudo.zip"; - sha256 = "1jil43j9ngz4422m76x67bafvxz75rncqqi57xd7fdxgcff7i8dp"; + url = "https://github.com/jenskutilek/sudo-font/releases/download/v${version}/sudo.zip"; + sha256 = "17vmcdz73mvy5m5zblgm2fi98v520hsl4lglww8gkhzl5zc6wb9y"; postFetch = '' mkdir -p $out/share/fonts/ diff --git a/third_party/nixpkgs/pkgs/data/fonts/times-newer-roman/default.nix b/third_party/nixpkgs/pkgs/data/fonts/times-newer-roman/default.nix new file mode 100644 index 0000000000..6122883c61 --- /dev/null +++ b/third_party/nixpkgs/pkgs/data/fonts/times-newer-roman/default.nix @@ -0,0 +1,25 @@ +{ lib, fetchzip }: + +let + version = "unstable-2018-09-11"; +in +fetchzip { + name = "times-newer-roman-${version}"; + + url = "https://web.archive.org/web/20210609022835/https://timesnewerroman.com/assets/TimesNewerRoman.zip"; + + postFetch = '' + mkdir -p $out/share/fonts/opentype + unzip -j $downloadedFile \*.otf -d $out/share/fonts/opentype + ''; + + hash = "sha256-Hx59RYLLwfimEQjEEes0lCpg6iql46DFwhQ7kVGiEzc="; + + meta = with lib; { + description = "A font that looks just like Times New Roman, except each character is 5-10% wider"; + homepage = "https://timesnewerroman.com/"; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ samuelgrf ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/data/fonts/twemoji-color-font/default.nix b/third_party/nixpkgs/pkgs/data/fonts/twemoji-color-font/default.nix index a2fde6813b..ae1d3f9927 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/twemoji-color-font/default.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/twemoji-color-font/default.nix @@ -5,20 +5,20 @@ stdenv.mkDerivation rec { pname = "twemoji-color-font"; - version = "13.0.1"; + version = "13.1.0"; # We fetch the prebuilt font because building it takes 1.5 hours on hydra. # Relevant issue: https://github.com/NixOS/nixpkgs/issues/97871 src = fetchurl { url = "https://github.com/eosrei/twemoji-color-font/releases/download/v${version}/TwitterColorEmoji-SVGinOT-Linux-${version}.tar.gz"; - sha256 = "1mn2cb6a3v0q8i81s9a8bk49nbwxq91n6ki7827i7rhjkncb0mbn"; + sha256 = "sha256-V8DWUUAK+HLDPcq3izPs174PfUnaSeLByDpZwhUIX5Q="; }; dontBuild = true; installPhase = '' install -Dm755 TwitterColorEmoji-SVGinOT.ttf $out/share/fonts/truetype/TwitterColorEmoji-SVGinOT.ttf - install -Dm644 fontconfig/56-twemoji-color.conf $out/etc/fonts/conf.d/56-twemoji-color.conf + install -Dm644 fontconfig/46-twemoji-color.conf $out/etc/fonts/conf.d/46-twemoji-color.conf ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/data/fonts/unscii/default.nix b/third_party/nixpkgs/pkgs/data/fonts/unscii/default.nix index 066a4d4d92..6fdeadf377 100644 --- a/third_party/nixpkgs/pkgs/data/fonts/unscii/default.nix +++ b/third_party/nixpkgs/pkgs/data/fonts/unscii/default.nix @@ -2,6 +2,11 @@ , fontforge, SDL, SDL_image, mkfontscale }: +let + perlenv = perl.withPackages (p: with p; [ + TextCharWidth + ]); +in stdenv.mkDerivation rec { pname = "unscii"; version = "1.1"; @@ -12,11 +17,23 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = - [ (perl.withPackages (p: [ p.TextCharWidth ])) + [ perlenv bdftopcf fontforge SDL SDL_image mkfontscale ]; + # Fixes shebang -> wrapper problem on Darwin + postPatch = '' + for perltool in *.pl; do + substituteInPlace Makefile \ + --replace "./$perltool" "${perlenv}/bin/perl ./$perltool" + done + ''; + + makeFlags = [ + "CC=${stdenv.cc.targetPrefix}cc" + ]; + preConfigure = '' patchShebangs . ''; diff --git a/third_party/nixpkgs/pkgs/data/fonts/vazir-code-font/default.nix b/third_party/nixpkgs/pkgs/data/fonts/vazir-code-font/default.nix new file mode 100644 index 0000000000..6702fd1b02 --- /dev/null +++ b/third_party/nixpkgs/pkgs/data/fonts/vazir-code-font/default.nix @@ -0,0 +1,26 @@ +{ lib, fetchFromGitHub }: + +let + pname = "vazir-code-font"; + version = "1.1.2"; +in fetchFromGitHub { + name = "${pname}-${version}"; + + owner = "rastikerdar"; + repo = "vazir-code-font"; + rev = "v${version}"; + + postFetch = '' + tar xf $downloadedFile --strip=1 + find . -name '*.ttf' -exec install -m444 -Dt $out/share/fonts/truetype {} \; + ''; + sha256 = "0ivwpn9xm2zwhwgg9mghyiy5v66cn4786w9j6rkff5cmzshv279r"; + + meta = with lib; { + homepage = "https://github.com/rastikerdar/vazir-code-font"; + description = "A Persian (farsi) Monospaced Font for coding"; + license = licenses.publicDomain; + platforms = platforms.all; + maintainers = [ maintainers.dearrude ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/data/icons/kora-icon-theme/default.nix b/third_party/nixpkgs/pkgs/data/icons/kora-icon-theme/default.nix index bdc7b55d9c..a2426e842a 100644 --- a/third_party/nixpkgs/pkgs/data/icons/kora-icon-theme/default.nix +++ b/third_party/nixpkgs/pkgs/data/icons/kora-icon-theme/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "kora-icon-theme"; - version = "1.4.2"; + version = "1.4.3"; src = fetchFromGitHub { owner = "bikass"; repo = "kora"; rev = "v${version}"; - sha256 = "1qnqz0h2c5kilch3308l8nfshgsrkllyysvqn0mxy70iziw895rv"; + sha256 = "sha256-tSkTwhhugvDTzzcxIln1xq3ZY6boHJR0LRGy20ONO5U="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/data/icons/whitesur-icon-theme/default.nix b/third_party/nixpkgs/pkgs/data/icons/whitesur-icon-theme/default.nix new file mode 100644 index 0000000000..95f41caca1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/data/icons/whitesur-icon-theme/default.nix @@ -0,0 +1,63 @@ +{ lib +, stdenvNoCC +, fetchFromGitHub +, gtk3 +, gnome +, gnome-icon-theme +, hicolor-icon-theme +}: + +stdenvNoCC.mkDerivation rec { + pname = "Whitesur-icon-theme"; + version = "2021-05-20"; + + src = fetchFromGitHub { + owner = "vinceliuice"; + repo = pname; + rev = version; + sha256 = "KboUYozTleOBKNun66g2oj7u/36hyQsPtRSk/x/LAWo="; + }; + + nativeBuildInputs = [ gtk3 ]; + + buildInputs = [ + gnome-icon-theme + gnome.adwaita-icon-theme + hicolor-icon-theme + ]; + + dontDropIconThemeCache = true; + + installPhase = '' + runHook preInstall + + mkdir -p $out/share/icons/WhiteSur{,-dark}/status + echo "$out/share/icons/WhiteSur/status $out/share/icons/WhiteSur-dark/status" | xargs -n 1 cp -r src/status/{16,22,24,32,symbolic} + echo "$out/share/icons/WhiteSur $out/share/icons/WhiteSur-dark" | xargs -n 1 cp -r ./{COPYING,AUTHORS} src/index.theme src/{actions,animations,apps,categories,devices,emblems,mimes,places} links/{actions,apps,categories,devices,emblems,mimes,places,status} + + # Change icon color for dark theme + sed -i "s/#363636/#dedede/g" $out/share/icons/WhiteSur-dark/{actions,devices,places,status}/{16,22,24}/* + sed -i "s/#363636/#dedede/g" $out/share/icons/WhiteSur-dark/actions/32/* + sed -i "s/#363636/#dedede/g" $out/share/icons/WhiteSur-dark/{actions,apps,categories,emblems,devices,mimes,places,status}/symbolic/* + + for f in actions animations apps categories devices emblems mimes places status; do + ln -sf $out/share/icons/WhiteSur/$f $out/share/icons/WhiteSur/$f@2x + ln -sf $out/share/icons/WhiteSur-dark/$f $out/share/icons/WhiteSur-dark/$f@2x + done + + for theme in $out/share/icons/*; do + gtk-update-icon-cache $theme + done + + runHook postInstall + ''; + + meta = with lib; { + description = "MacOS Big Sur style icon theme for Linux desktops"; + homepage = "https://github.com/vinceliuice/WhiteSur-icon-theme"; + license = licenses.gpl3Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ icy-thought ]; + }; + +} diff --git a/third_party/nixpkgs/pkgs/data/misc/cacert/default.nix b/third_party/nixpkgs/pkgs/data/misc/cacert/default.nix index 17bb30a54b..b4a8ebc4ef 100644 --- a/third_party/nixpkgs/pkgs/data/misc/cacert/default.nix +++ b/third_party/nixpkgs/pkgs/data/misc/cacert/default.nix @@ -10,7 +10,7 @@ with lib; let - version = "3.63"; + version = "3.66"; underscoreVersion = builtins.replaceStrings ["."] ["_"] version; in @@ -20,7 +20,7 @@ stdenv.mkDerivation { src = fetchurl { url = "mirror://mozilla/security/nss/releases/NSS_${underscoreVersion}_RTM/src/nss-${version}.tar.gz"; - sha256 = "0892xbjcaw6g4rd2rs4qa37nbda248cjrgxa4faaw0licbpjyb8q"; + sha256 = "1jfdnh5l4k57r2vb07s06hqi7m2qzk0d9x25lsdsrw3cflx9x9w9"; }; certdata2pem = fetchurl { diff --git a/third_party/nixpkgs/pkgs/data/misc/common-licenses/default.nix b/third_party/nixpkgs/pkgs/data/misc/common-licenses/default.nix new file mode 100644 index 0000000000..a0c21b5d90 --- /dev/null +++ b/third_party/nixpkgs/pkgs/data/misc/common-licenses/default.nix @@ -0,0 +1,28 @@ +{ stdenv +, fetchurl +, lib +}: + +stdenv.mkDerivation rec { + pname = "common-licenses"; + version = "11.1"; + + src = fetchurl { + url = "http://deb.debian.org/debian/pool/main/b/base-files/base-files_${version}.tar.xz"; + sha256 = "1i3hgd9vs14k819k441iibcgmi2zavnpqbnppyn2cz70kd830nbm"; + }; + + installPhase = '' + mkdir -p $out/share + cp -r licenses $out/share/common-licenses + cat debian/base-files.links | grep common-licenses | sed -e "s|usr|$out|g" -e "s|^|ln -s |g" | bash -x + ''; + + meta = with lib; { + description = "common-licenses extracted from debian base-files package"; + homepage = "https://tracker.debian.org/pkg/base-files"; + license = licenses.gpl2Plus; + platforms = platforms.linux; + maintainers = [ maintainers.mkg20001 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/data/misc/hackage/pin.json b/third_party/nixpkgs/pkgs/data/misc/hackage/pin.json index f53ef94c47..8a8cfa74d7 100644 --- a/third_party/nixpkgs/pkgs/data/misc/hackage/pin.json +++ b/third_party/nixpkgs/pkgs/data/misc/hackage/pin.json @@ -1,6 +1,6 @@ { - "commit": "0fb7f9edea05a2b464b5667debe1e3ece585c185", - "url": "https://github.com/commercialhaskell/all-cabal-hashes/archive/0fb7f9edea05a2b464b5667debe1e3ece585c185.tar.gz", - "sha256": "01rzbda8g62gj2x3if46lglis9gqw3qfpqyiv2lrnm7alsg36ld9", - "msg": "Update from Hackage at 2021-05-19T07:17:55Z" + "commit": "8005ce7c7ba90fa92db65f86c544623353a96cf8", + "url": "https://github.com/commercialhaskell/all-cabal-hashes/archive/8005ce7c7ba90fa92db65f86c544623353a96cf8.tar.gz", + "sha256": "1kzhh7h0csb0vh9avbjsm6hziaa3lbpmzp4pkij4s3bbl4l664aa", + "msg": "Update from Hackage at 2021-06-22T07:13:30Z" } diff --git a/third_party/nixpkgs/pkgs/data/misc/shared-mime-info/default.nix b/third_party/nixpkgs/pkgs/data/misc/shared-mime-info/default.nix index c69a9802c0..a2e301f40e 100644 --- a/third_party/nixpkgs/pkgs/data/misc/shared-mime-info/default.nix +++ b/third_party/nixpkgs/pkgs/data/misc/shared-mime-info/default.nix @@ -1,8 +1,11 @@ -{ lib, stdenv -, fetchurl +{ stdenv +, lib +, fetchFromGitLab +, fetchpatch +, meson +, ninja , pkg-config , gettext -, perlPackages , itstool , libxml2 , glib @@ -10,31 +13,47 @@ stdenv.mkDerivation rec { pname = "shared-mime-info"; - version = "1.13.1"; + version = "2.1"; - src = fetchurl { - url = "https://gitlab.freedesktop.org/xdg/${pname}/uploads/5349e18c86eb96eee258a5c1f19122d0/${pname}-${version}.tar.xz"; - sha256 = "1bic8z5nz08qxv1x6zlxnx2j4cmlzm12kygrn3rrh1djqxdhma3f"; + src = fetchFromGitLab { + domain = "gitlab.freedesktop.org"; + owner = "xdg"; + repo = pname; + rev = version; + sha256 = "07bxv44p43pqq4ymfnyy50yli7lwdqymhvclna42rkn1cazq3vb5"; }; + patches = [ + # xmlto is only used for building the docs, which are not installed anyways. + (fetchpatch { + name = "xmlto-optional.patch"; + url = "https://gitlab.freedesktop.org/xdg/shared-mime-info/-/merge_requests/110.patch"; + sha256 = "0p5gxlcmn8ji5bc7pd105s1halqwa1d28lfx9yj43rn6mav7allx"; + }) + ]; + nativeBuildInputs = [ + meson + ninja pkg-config gettext itstool - ] ++ (with perlPackages; [ - perl XMLParser - ]); + ]; buildInputs = [ libxml2 glib ]; + mesonFlags = [ + "-Dupdate-mimedb=true" + ]; + meta = with lib; { description = "A database of common MIME types"; homepage = "http://freedesktop.org/wiki/Software/shared-mime-info"; license = licenses.gpl2Plus; platforms = platforms.unix; - maintainers = [ maintainers.mimame ]; + maintainers = teams.freedesktop.members ++ [ maintainers.mimame ]; }; } diff --git a/third_party/nixpkgs/pkgs/data/misc/tzdata/default.nix b/third_party/nixpkgs/pkgs/data/misc/tzdata/default.nix index 7ab25da3cc..aa3d9e787b 100644 --- a/third_party/nixpkgs/pkgs/data/misc/tzdata/default.nix +++ b/third_party/nixpkgs/pkgs/data/misc/tzdata/default.nix @@ -2,16 +2,16 @@ stdenv.mkDerivation rec { pname = "tzdata"; - version = "2020f"; + version = "2021a"; srcs = [ (fetchurl { url = "https://data.iana.org/time-zones/releases/tzdata${version}.tar.gz"; - sha256 = "10b8cr55x6ji14n3kqkn3avj1s9b79b8gszh81fxrrisij8k248j"; + sha256 = "022fn6gkmp7pamlgab04x0dm5hnyn2m2fcnyr3pvm36612xd5rrr"; }) (fetchurl { url = "https://data.iana.org/time-zones/releases/tzcode${version}.tar.gz"; - sha256 = "1i998crd9fxdfhv4jd241j1arx0ng7j7cvczpmj4y5j5fwmfmvng"; + sha256 = "1l02b0jiwp3fl0xd6227i69d26rmx3yrnq0ssq9vvdmm4jhvyipb"; }) ]; @@ -68,6 +68,10 @@ stdenv.mkDerivation rec { homepage = "http://www.iana.org/time-zones"; description = "Database of current and historical time zones"; changelog = "https://github.com/eggert/tz/blob/${version}/NEWS"; + license = with licenses; [ + bsd3 # tzcode + publicDomain # tzdata + ]; platforms = platforms.all; maintainers = with maintainers; [ fpletz ]; }; diff --git a/third_party/nixpkgs/pkgs/data/misc/wireless-regdb/default.nix b/third_party/nixpkgs/pkgs/data/misc/wireless-regdb/default.nix index fc238fbe14..ca57640e4a 100644 --- a/third_party/nixpkgs/pkgs/data/misc/wireless-regdb/default.nix +++ b/third_party/nixpkgs/pkgs/data/misc/wireless-regdb/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "wireless-regdb"; - version = "2020.04.29"; + version = "2021.04.21"; src = fetchurl { url = "https://www.kernel.org/pub/software/network/${pname}/${pname}-${version}.tar.xz"; - sha256 = "0yicda474ygahv8da18h1p4yf42s6x2f208mlwcw4xsrxld07zc9"; + sha256 = "sha256-nkwCsqlxDfTb2zJ8OWEujLuuZJWYev7drrqyjB6j2Po="; }; dontBuild = true; diff --git a/third_party/nixpkgs/pkgs/data/themes/adwaita-qt/default.nix b/third_party/nixpkgs/pkgs/data/themes/adwaita-qt/default.nix index 2722c4fe20..fa69afe50c 100644 --- a/third_party/nixpkgs/pkgs/data/themes/adwaita-qt/default.nix +++ b/third_party/nixpkgs/pkgs/data/themes/adwaita-qt/default.nix @@ -12,13 +12,13 @@ mkDerivation rec { pname = "adwaita-qt"; - version = "1.3.0"; + version = "1.3.1"; src = fetchFromGitHub { owner = "FedoraQt"; repo = pname; rev = version; - sha256 = "1fkivdiz4al84nhgg1srj33l109j9si63biw3asy339cyyzj28c9"; + sha256 = "sha256-3uHa7veLzaSIm9WSR/Z0X+aSdXziO1TnI/CQgccrKYg="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/data/themes/arc/default.nix b/third_party/nixpkgs/pkgs/data/themes/arc/default.nix index 630d928e60..ea2362c052 100644 --- a/third_party/nixpkgs/pkgs/data/themes/arc/default.nix +++ b/third_party/nixpkgs/pkgs/data/themes/arc/default.nix @@ -46,7 +46,7 @@ stdenv.mkDerivation rec { ''; mesonFlags = [ - "-Dthemes=cinnamon,gnome-shell,gtk2,gtk3,plank,xfwm" + "-Dthemes=cinnamon,gnome-shell,gtk2,gtk3,plank,xfwm,metacity" "-Dvariants=light,darker,dark,lighter" "-Dcinnamon_version=${cinnamon.cinnamon-common.version}" "-Dgnome_shell_version=${gnome.gnome-shell.version}" diff --git a/third_party/nixpkgs/pkgs/data/themes/marwaita/default.nix b/third_party/nixpkgs/pkgs/data/themes/marwaita/default.nix index 91404af084..7d13e79421 100644 --- a/third_party/nixpkgs/pkgs/data/themes/marwaita/default.nix +++ b/third_party/nixpkgs/pkgs/data/themes/marwaita/default.nix @@ -9,13 +9,13 @@ stdenv.mkDerivation rec { pname = "marwaita"; - version = "9.2.2"; + version = "9.5"; src = fetchFromGitHub { owner = "darkomarko42"; repo = pname; rev = version; - sha256 = "0fbcncsldn2v6x6jla187mp6sjm529ij8rf85wcxpahc45vwb9pg"; + sha256 = "0hhiwims4nxq06kakc0hc4rn4hvnlrpbx6ca929vd2qbi6wa2k9h"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/data/themes/matcha/default.nix b/third_party/nixpkgs/pkgs/data/themes/matcha/default.nix index d060e20267..a3d473045e 100644 --- a/third_party/nixpkgs/pkgs/data/themes/matcha/default.nix +++ b/third_party/nixpkgs/pkgs/data/themes/matcha/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "matcha-gtk-theme"; - version = "2021-06-02"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "vinceliuice"; repo = pname; rev = version; - sha256 = "0wx0dgfl71wx02nrmf794xn28cvjx81vcmbnzwyyzwcbb9pacdpp"; + sha256 = "sha256-YEa84y7ZhLqmN0kNSJR2/Txm5pZvSwuqnmckL4XnyjM="; }; buildInputs = [ gdk-pixbuf librsvg ]; diff --git a/third_party/nixpkgs/pkgs/data/themes/materia-kde/default.nix b/third_party/nixpkgs/pkgs/data/themes/materia-kde/default.nix new file mode 100644 index 0000000000..bdadebbf60 --- /dev/null +++ b/third_party/nixpkgs/pkgs/data/themes/materia-kde/default.nix @@ -0,0 +1,23 @@ +{ lib, stdenv, fetchFromGitHub }: + +stdenv.mkDerivation rec { + pname = "materia-kde-theme"; + version = "20210612"; + + src = fetchFromGitHub { + owner = "PapirusDevelopmentTeam"; + repo = "materia-kde"; + rev = version; + sha256 = "P76rLj7x4KpYb3hdHBSUM8X/RcxKoJl1THIXHdfPoAY="; + }; + + makeFlags = [ "PREFIX=$(out)" ]; + + meta = with lib; { + description = "A port of the materia theme for Plasma"; + homepage = "https://github.com/PapirusDevelopmentTeam/materia-kde"; + license = licenses.gpl3; + maintainers = [ maintainers.diffumist ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/data/themes/nordic/default.nix b/third_party/nixpkgs/pkgs/data/themes/nordic/default.nix index c12f9e2ba7..1014d48344 100644 --- a/third_party/nixpkgs/pkgs/data/themes/nordic/default.nix +++ b/third_party/nixpkgs/pkgs/data/themes/nordic/default.nix @@ -2,70 +2,70 @@ stdenv.mkDerivation rec { pname = "nordic"; - version = "unstable-2021-05-21"; + version = "unstable-2021-06-04"; srcs = [ (fetchFromGitHub { owner = "EliverLara"; repo = pname; - rev = "7e4f95ddaa8d94a66ed11a3b939cbd10864f1610"; - sha256 = "079gf8gxn1d2j44nhx4jzx2hz8hpsid7xwh414fjl3g2avb7n05a"; + rev = "9a98c05f4d4f6c9e701ac20b0bf5c18284ad0015"; + sha256 = "0ghgr7fr7anm8hdq6n46xhkjxydqkr0qlk1q7mdg08j43f0yra7b"; name = "Nordic"; }) (fetchFromGitHub { owner = "EliverLara"; repo = pname; - rev = "0b4197e281ba306ac4918cabbd83003c38c0067d"; - sha256 = "1w85i2fbils2ivwsa85g1asj2nx0p0cak840nyr58hdwky49ci5p"; + rev = "90ce6f539735af1f231c4fa07708cef602e1c8a2"; + sha256 = "1g6sz7ifpc8jf4iplcsmihqhjdc7yp5xygw8584n122jmh8mak47"; name = "Nordic-standard-buttons"; }) (fetchFromGitHub { owner = "EliverLara"; repo = pname; - rev = "aba3c78910de8a47950a0b2defb8022c615d91f6"; - sha256 = "1746w0iahmdgw3kj1q2cswf12pf0ln7qq1grfz9sn8rjafzjchj8"; + rev = "529cdb86b4d4474a67a56eb9377e3c7907b452db"; + sha256 = "06li44i5wh4h06fbhvjf5cjma5czjdgnwvm79d8hg6vmi2101b0a"; name = "Nordic-darker"; }) (fetchFromGitHub { owner = "EliverLara"; repo = pname; - rev = "9946dd747e1ea05782e084d2c2d94e2e4c7605ac"; - sha256 = "0mz1l1h26zhv0pnsbs0rx0xrwrn2y8g3ik0aa8ww5f411vvzgfr5"; + rev = "1d16f37de315c298a6c3d79a552ed6f18cbb7fb4"; + sha256 = "0nxzygnysg4ciib337vay0qcc80hpryjnclwjwjzj51i95366k25"; name = "Nordic-darker-standard-buttons"; }) (fetchFromGitHub { owner = "EliverLara"; repo = pname; - rev = "5c0be5a783cd14af5c7647ca13d946c64e03561d"; - sha256 = "0751z3b9s0ycrsha20jx8lhdgvggcl0rdgv975dpaiqqjqyd9z06"; + rev = "78a30080bc50ee88c23d393049306ef1925bcdb8"; + sha256 = "10w4815fcf3pd24ar7jp0wcdiwn3zzrdj2p6fqlgx26biz7kf3iv"; name = "Nordic-bluish-accent"; }) (fetchFromGitHub { owner = "EliverLara"; repo = pname; - rev = "9cb8d9f786614579e59ec2c3dd9fd8dd9b56316e"; - sha256 = "09s9y7waygrx3p6c0c4py0ywg2ihpdmx73xhw5f92rr5nhsvish7"; + rev = "e4363da8d457e8b14f6e4340979225db92d34aa9"; + sha256 = "1sjw2hvg4jgxqzgqhqixq216a7vv5licbc8ii1rsz88ycafsbr7j"; name = "Nordic-bluish-accent-standard-buttons"; }) (fetchFromGitHub { owner = "EliverLara"; repo = "${pname}-polar"; - rev = "69652db56e1721ac183cd57d21a801a09655a811"; - sha256 = "0zjd4np11mjwmc1kh2n1ig77g4wq88s2yrmnga0gvw1lf44n3qn2"; + rev = "a38fd7d440309573947d3e53ea3ed295cf027ce7"; + sha256 = "1r6hz0m0y7c1d0ka1x9cd47r0jvpgkld6x3gf2b7w7yvqpmh6a44"; name = "Nordic-Polar"; }) (fetchFromGitHub { owner = "EliverLara"; repo = "${pname}-polar"; - rev = "3a67c1a2308ba3e9ec5d82f4a3416f85b6085b08"; - sha256 = "0gpg2izh4ay78j79vjp4svmi3qy9qaw0n6ai8zwm7p25dwm56fjy"; + rev = "b86d43c48bcac57c49d891b967311fd90f6d4bcd"; + sha256 = "0c725kf5ql42zrqk6dwk6i7wyrhr3gddipvhy6692nv0dszqm0ml"; name = "Nordic-Polar-standard-buttons"; }) ]; diff --git a/third_party/nixpkgs/pkgs/data/themes/orchis/default.nix b/third_party/nixpkgs/pkgs/data/themes/orchis-theme/default.nix similarity index 83% rename from third_party/nixpkgs/pkgs/data/themes/orchis/default.nix rename to third_party/nixpkgs/pkgs/data/themes/orchis-theme/default.nix index a53e2f79f6..b63e9c06d2 100644 --- a/third_party/nixpkgs/pkgs/data/themes/orchis/default.nix +++ b/third_party/nixpkgs/pkgs/data/themes/orchis-theme/default.nix @@ -9,14 +9,14 @@ }: stdenvNoCC.mkDerivation rec { - pname = "orchis"; - version = "2021-04-20"; + pname = "orchis-theme"; + version = "2021-06-09"; src = fetchFromGitHub { repo = "Orchis-theme"; owner = "vinceliuice"; rev = version; - sha256 = "sha256-cCUmainVTqFztZGpL2z2Zj6zcE2SQBWrec6yNFUMo5M="; + sha256 = "sha256-YlrocFDk3da2eqxbJ5lPUUxHHvJZx19LOa0MSljWY8Q="; }; nativeBuildInputs = [ gtk3 sassc ]; @@ -25,10 +25,6 @@ stdenvNoCC.mkDerivation rec { propagatedUserEnvPkgs = [ gtk-engine-murrine ]; - dontPatch = true; - dontConfigure = true; - dontBuild = true; - preInstall = '' mkdir -p $out/share/themes ''; diff --git a/third_party/nixpkgs/pkgs/data/themes/qogir/default.nix b/third_party/nixpkgs/pkgs/data/themes/qogir/default.nix index a1011fa0a1..c4f97ebfbd 100644 --- a/third_party/nixpkgs/pkgs/data/themes/qogir/default.nix +++ b/third_party/nixpkgs/pkgs/data/themes/qogir/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "qogir-theme"; - version = "2021-04-20"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "vinceliuice"; repo = pname; rev = version; - sha256 = "17ajrg5safnb6b1jbwvnysc4rvl6gkpnqdf89bammlrpkj6fr3ip"; + sha256 = "178lk0zffm4nd8fc872rfpm2aii1nszq0k389gkiyxkqphmknn4n"; }; buildInputs = [ gdk-pixbuf librsvg ]; diff --git a/third_party/nixpkgs/pkgs/data/themes/sweet/default.nix b/third_party/nixpkgs/pkgs/data/themes/sweet/default.nix index 8a62735d2e..bd1df3277c 100644 --- a/third_party/nixpkgs/pkgs/data/themes/sweet/default.nix +++ b/third_party/nixpkgs/pkgs/data/themes/sweet/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl }: +{ lib, stdenv, fetchurl, gtk-engine-murrine }: stdenv.mkDerivation rec { pname = "sweet"; @@ -27,6 +27,8 @@ stdenv.mkDerivation rec { }) ]; + propagatedUserEnvPkgs = [ gtk-engine-murrine ]; + sourceRoot = "."; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/data/themes/vimix/default.nix b/third_party/nixpkgs/pkgs/data/themes/vimix/default.nix index 5a56128937..1694063e4f 100644 --- a/third_party/nixpkgs/pkgs/data/themes/vimix/default.nix +++ b/third_party/nixpkgs/pkgs/data/themes/vimix/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "vimix-gtk-themes"; - version = "2020-11-28"; + version = "2021-04-25"; src = fetchFromGitHub { owner = "vinceliuice"; repo = pname; rev = version; - sha256 = "1m84p4cs9dfwc27zfjnwgkfdnfmlzbimq3g5z4mhz23cijm178rf"; + sha256 = "0ak763vs27h5z2pgcqpz1g1hypn5gl0p0ylffawc9zdi1wp2mpxb"; }; buildInputs = [ gtk_engines ]; @@ -16,16 +16,18 @@ stdenv.mkDerivation rec { propagatedUserEnvPkgs = [ gtk-engine-murrine ]; installPhase = '' + runHook preInstall patchShebangs . mkdir -p $out/share/themes - name= ./install.sh -d $out/share/themes + name= ./install.sh --all --dest $out/share/themes rm $out/share/themes/*/{AUTHORS,LICENSE} + runHook postInstall ''; meta = with lib; { description = "Flat Material Design theme for GTK based desktop environments"; homepage = "https://github.com/vinceliuice/vimix-gtk-themes"; - license = licenses.gpl3; + license = licenses.gpl3Only; platforms = platforms.unix; maintainers = [ maintainers.romildo ]; }; diff --git a/third_party/nixpkgs/pkgs/data/themes/whitesur/default.nix b/third_party/nixpkgs/pkgs/data/themes/whitesur/default.nix new file mode 100644 index 0000000000..e9691eaad7 --- /dev/null +++ b/third_party/nixpkgs/pkgs/data/themes/whitesur/default.nix @@ -0,0 +1,56 @@ +{ lib +, stdenv +, fetchFromGitHub +, glib +, gnome-themes-extra +, libxml2 +, sassc +, util-linux +}: + +stdenv.mkDerivation rec { + pname = "whitesur-gtk-theme"; + version = "2021-06-23"; + + src = fetchFromGitHub { + owner = "vinceliuice"; + repo = pname; + rev = version; + sha256 = "075fw57mv6zadq4dryn8bg2b3vq8inmisq18s758cv53pprxh9hw"; + }; + + nativeBuildInputs = [ + glib + libxml2 + sassc + util-linux + ]; + + buildInputs = [ + gnome-themes-extra # adwaita engine for Gtk2 + ]; + + postPatch = '' + find -name "*.sh" -print0 | while IFS= read -r -d ''' file; do patchShebangs "$file"; done + + # Do not provide `sudo`, as it is not needed in our use case of the install script + substituteInPlace lib-core.sh --replace '$(which sudo)' false + ''; + + dontBuild = true; + + installPhase = '' + runHook preInstall + mkdir -p $out/share/themes + ./install.sh --dest $out/share/themes --alt all --theme all + runHook postInstall + ''; + + meta = with lib; { + description = "MacOS Big Sur like theme for Gnome desktops"; + homepage = "https://github.com/vinceliuice/WhiteSur-gtk-theme"; + license = licenses.mit; + platforms = platforms.unix; + maintainers = [ maintainers.romildo ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/data/themes/yaru/default.nix b/third_party/nixpkgs/pkgs/data/themes/yaru/default.nix index c2f449e9f2..b37a921bba 100644 --- a/third_party/nixpkgs/pkgs/data/themes/yaru/default.nix +++ b/third_party/nixpkgs/pkgs/data/themes/yaru/default.nix @@ -1,5 +1,18 @@ -{ lib, stdenv, fetchFromGitHub, meson, sassc, pkg-config, glib, ninja, - python3, gtk3, gnome, gtk-engine-murrine, humanity-icon-theme, hicolor-icon-theme }: +{ lib +, stdenv +, fetchFromGitHub +, meson +, sassc +, pkg-config +, glib +, ninja +, python3 +, gtk3 +, gnome +, gtk-engine-murrine +, humanity-icon-theme +, hicolor-icon-theme +}: stdenv.mkDerivation rec { pname = "yaru"; @@ -13,7 +26,9 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ meson sassc pkg-config glib ninja python3 ]; + buildInputs = [ gtk3 gnome.gnome-themes-extra ]; + propagatedBuildInputs = [ humanity-icon-theme hicolor-icon-theme ]; propagatedUserEnvPkgs = [ gtk-engine-murrine ]; @@ -27,6 +42,6 @@ stdenv.mkDerivation rec { homepage = "https://github.com/ubuntu/yaru"; license = with licenses; [ cc-by-sa-40 gpl3Plus lgpl21Only lgpl3Only ]; platforms = platforms.linux; - maintainers = [ maintainers.jD91mZM2 ]; + maintainers = with maintainers; [ fortuneteller2k ]; }; } diff --git a/third_party/nixpkgs/pkgs/desktops/cinnamon/bulky/default.nix b/third_party/nixpkgs/pkgs/desktops/cinnamon/bulky/default.nix new file mode 100644 index 0000000000..7797586f5a --- /dev/null +++ b/third_party/nixpkgs/pkgs/desktops/cinnamon/bulky/default.nix @@ -0,0 +1,60 @@ +{ stdenv +, lib +, fetchFromGitHub +, wrapGAppsHook +, python3 +, gsettings-desktop-schemas +, gettext +, gtk3 +, glib +, common-licenses +}: + +stdenv.mkDerivation rec { + pname = "bulky"; + version = "1.4"; + + src = fetchFromGitHub { + owner = "linuxmint"; + repo = "bulky"; + rev = version; + sha256 = "sha256-i6OmkZGgZpfp8G2T6CDFQmIG/0V36YFbWBR7MvDi6Ew="; + }; + + nativeBuildInputs = [ + wrapGAppsHook + gsettings-desktop-schemas + gettext + ]; + + buildInputs = [ + (python3.withPackages(p: with p; [ pygobject3 magic setproctitle ])) + gsettings-desktop-schemas + gtk3 + glib + ]; + + postPatch = '' + substituteInPlace usr/lib/bulky/bulky.py \ + --replace "/usr/share/locale" "$out/share/locale" \ + --replace /usr/share/bulky "$out/share/bulky" \ + --replace /usr/share/common-licenses "${common-licenses}/share/common-licenses" \ + --replace __DEB_VERSION__ "${version}" + ''; + + installPhase = '' + runHook preInstall + chmod +x usr/share/applications/* + cp -ra usr $out + ln -sf $out/lib/bulky/bulky.py $out/bin/bulky + runHook postInstall + ''; + + meta = with lib; { + description = "Bulk rename app"; + homepage = "https://github.com/linuxmint/bulky"; + license = licenses.gpl3Plus; + platforms = platforms.linux; + maintainers = [ maintainers.mkg20001 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/desktops/cinnamon/cinnamon-gsettings-overrides/default.nix b/third_party/nixpkgs/pkgs/desktops/cinnamon/cinnamon-gsettings-overrides/default.nix index 832a534e5d..6f54515569 100644 --- a/third_party/nixpkgs/pkgs/desktops/cinnamon/cinnamon-gsettings-overrides/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/cinnamon/cinnamon-gsettings-overrides/default.nix @@ -15,6 +15,7 @@ , cinnamon-session , cinnamon-settings-daemon , cinnamon-common +, bulky }: let @@ -24,6 +25,7 @@ let mint-artwork # on + bulky muffin nemo xapps diff --git a/third_party/nixpkgs/pkgs/desktops/cinnamon/default.nix b/third_party/nixpkgs/pkgs/desktops/cinnamon/default.nix index 2a52b83f04..4d148fdcdb 100644 --- a/third_party/nixpkgs/pkgs/desktops/cinnamon/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/cinnamon/default.nix @@ -13,6 +13,7 @@ lib.makeScope pkgs.newScope (self: with self; { }); # blueberry -> pkgs/tools/bluetooth/blueberry/default.nix + bulky = callPackage ./bulky {}; cinnamon-common = callPackage ./cinnamon-common { }; cinnamon-control-center = callPackage ./cinnamon-control-center { }; cinnamon-desktop = callPackage ./cinnamon-desktop { }; diff --git a/third_party/nixpkgs/pkgs/desktops/enlightenment/efl/default.nix b/third_party/nixpkgs/pkgs/desktops/enlightenment/efl/default.nix index a68886d414..7e716ddb5c 100644 --- a/third_party/nixpkgs/pkgs/desktops/enlightenment/efl/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/enlightenment/efl/default.nix @@ -4,7 +4,7 @@ , ninja , pkg-config , SDL2 -, alsaLib +, alsa-lib , bullet , check , curl @@ -101,7 +101,7 @@ stdenv.mkDerivation rec { propagatedBuildInputs = [ SDL2 - alsaLib + alsa-lib bullet curl dbus diff --git a/third_party/nixpkgs/pkgs/desktops/enlightenment/enlightenment/default.nix b/third_party/nixpkgs/pkgs/desktops/enlightenment/enlightenment/default.nix index 3b750bd08b..84cadd2094 100644 --- a/third_party/nixpkgs/pkgs/desktops/enlightenment/enlightenment/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/enlightenment/enlightenment/default.nix @@ -4,7 +4,7 @@ , ninja , pkg-config , gettext -, alsaLib +, alsa-lib , acpid , bc , ddcutil @@ -34,7 +34,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib acpid # for systems with ACPI for lid events, AC/Battery plug in/out etc bc # for the Everything module calculator mode ddcutil # specifically libddcutil.so.2 for backlight control diff --git a/third_party/nixpkgs/pkgs/desktops/gnome-2/bindings/gnome-python-desktop/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome-2/bindings/gnome-python-desktop/default.nix index 86d92adbea..a350c224e8 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome-2/bindings/gnome-python-desktop/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome-2/bindings/gnome-python-desktop/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, gnome_python, librsvg, libwnck, libgtop, pkg-config, python2, gtk2 }: +{ lib, stdenv, fetchurl, gnome_python, librsvg, libwnck2, libgtop, pkg-config, python2, gtk2 }: let inherit (python2.pkgs) python pygtk; @@ -14,7 +14,7 @@ in stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ gtk2 librsvg libwnck libgtop python ]; + buildInputs = [ gtk2 librsvg libwnck2 libgtop python ]; propagatedBuildInputs = [ gnome_python pygtk ]; # gnome-python-desktop expects that .pth file is already installed by PyGTK diff --git a/third_party/nixpkgs/pkgs/desktops/gnome-2/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome-2/default.nix index 50222b386c..7221686320 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome-2/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome-2/default.nix @@ -74,7 +74,7 @@ lib.makeScope pkgs.newScope (self: with self; { glib glibmm atk atkmm cairo pango pangomm gdk_pixbuf gtkmm2 libcanberra-gtk2 # Included for backwards compatibility - libsoup libwnck gtk-doc gnome-doc-utils rarian + libsoup libwnck2 gtk-doc gnome-doc-utils rarian gvfs # added 2019-09-03 ; diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/apps/accerciser/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/apps/accerciser/default.nix index d81b846619..9c099f6529 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/apps/accerciser/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/apps/accerciser/default.nix @@ -11,7 +11,7 @@ , at-spi2-core , dbus , gettext -, libwnck3 +, libwnck , adwaita-icon-theme }: @@ -40,7 +40,7 @@ python3.pkgs.buildPythonApplication rec { adwaita-icon-theme at-spi2-core gtk3 - libwnck3 + libwnck ]; propagatedBuildInputs = with python3.pkgs; [ diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-boxes/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-boxes/default.nix index 5972843ab3..8d0e86b1a9 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-boxes/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-boxes/default.nix @@ -54,11 +54,11 @@ stdenv.mkDerivation rec { pname = "gnome-boxes"; - version = "40.1"; + version = "40.2"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.major version}/${pname}-${version}.tar.xz"; - sha256 = "seKPLH+3a/T7uGLQ1S6BG5TL6f8W8GdAiWRWhpCILvg="; + sha256 = "hzN1mi2GpWNnWWpTSQRjO4HKqlxFpWNtsulZDHFK6Nk="; }; doCheck = true; diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-calendar/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-calendar/default.nix index 9c0b1f6597..da2e37e51f 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-calendar/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-calendar/default.nix @@ -24,11 +24,11 @@ stdenv.mkDerivation rec { pname = "gnome-calendar"; - version = "40.1"; + version = "40.2"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.major version}/${pname}-${version}.tar.xz"; - sha256 = "2M30n57uHDo8aZHDL4VjxKfE2w23ymPOUcyRjkM7M6U="; + sha256 = "njcB/UoOWJgA0iUgN3BkTzHVI0ZV9UqDqF/wVW3X6jM="; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-maps/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-maps/default.nix index 2818215a4f..0a07428b1b 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-maps/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-maps/default.nix @@ -29,11 +29,11 @@ stdenv.mkDerivation rec { pname = "gnome-maps"; - version = "40.1"; + version = "40.2"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.major version}/${pname}-${version}.tar.xz"; - sha256 = "sha256-mAXUwFs6NpV0bTdisoFr/+bZ19VuF7y7nZ1B3C0CYxo="; + sha256 = "sha256-g+gVAFTQxLWmPJoJvyx9+YmuaQ7Kwb5r97ExKqpjm9Q="; }; doCheck = true; diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-music/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-music/default.nix index 51e3d5a9cd..803235e958 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-music/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/apps/gnome-music/default.nix @@ -30,13 +30,13 @@ python3.pkgs.buildPythonApplication rec { pname = "gnome-music"; - version = "40.0"; + version = "40.1.1"; format = "other"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.major version}/${pname}-${version}.tar.xz"; - sha256 = "1djqhd4jccvk352hwxjhiwjgbnv1qnpv450f2c6w6581vcn9pq38"; + sha256 = "IMtnPhHC8xQ9NYjPyrmhInkQgOun3GASypTBhglVjVE="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/core/eog/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/core/eog/default.nix index 426a878335..e67a623069 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/core/eog/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/core/eog/default.nix @@ -28,11 +28,11 @@ stdenv.mkDerivation rec { pname = "eog"; - version = "40.1"; + version = "40.2"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.major version}/${pname}-${version}.tar.xz"; - sha256 = "sha256-e+CGA3/tm2v4S6yXqD48kYMBt+nJavEwsnJS0KURFok="; + sha256 = "sha256-kITimZMftX3ih+V9vS7i0pf7Z0DA1TW52o1fGWqP0ZU="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/core/epiphany/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/core/epiphany/default.nix index f286d384c4..0b4191b226 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/core/epiphany/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/core/epiphany/default.nix @@ -37,11 +37,11 @@ stdenv.mkDerivation rec { pname = "epiphany"; - version = "40.1"; + version = "40.2"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.major version}/${pname}-${version}.tar.xz"; - sha256 = "1l0sb1xg16g4wg3z99xb0w2kbyczbn7q4mphs3w4lxq22xml4sk9"; + sha256 = "dRGeIgZWV89w7ytgPU9zg1VzvQNPHmGMD2YkeP1saDU="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/core/evince/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/core/evince/default.nix index 3d7f3e0b83..f5652d8c64 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/core/evince/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/core/evince/default.nix @@ -44,13 +44,13 @@ stdenv.mkDerivation rec { pname = "evince"; - version = "40.1"; + version = "40.2"; outputs = [ "out" "dev" "devdoc" ]; src = fetchurl { url = "mirror://gnome/sources/evince/${lib.versions.major version}/${pname}-${version}.tar.xz"; - sha256 = "0bfg7prmjk3z8irx1nfkkqph3igg3cy4pwd7pcxjxbshqdin6rks"; + sha256 = "D/fseTdqipesTNJ00y6ATH4jbvLS1dP2Rt5uuIKmPHc="; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/core/evolution-data-server/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/core/evolution-data-server/default.nix index 0ed3565d7f..8781a2aa7f 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/core/evolution-data-server/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/core/evolution-data-server/default.nix @@ -6,13 +6,13 @@ stdenv.mkDerivation rec { pname = "evolution-data-server"; - version = "3.40.1"; + version = "3.40.2"; outputs = [ "out" "dev" ]; src = fetchurl { url = "mirror://gnome/sources/evolution-data-server/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "08iykha7zhk21b3axsp3v1jfwda612v0m8rz8zlzppm5i8s5ziza"; + sha256 = "7IKVFjnzKlzs6AqLC5qj9mt9MY4+4sHDUjTy4r3opBg="; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-settings-daemon/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-settings-daemon/default.nix index e091cf2365..4a1b7f4c20 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-settings-daemon/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-settings-daemon/default.nix @@ -14,7 +14,7 @@ , libgnomekbd , lcms2 , libpulseaudio -, alsaLib +, alsa-lib , libcanberra-gtk3 , upower , colord @@ -86,7 +86,7 @@ stdenv.mkDerivation rec { gnome-desktop lcms2 libpulseaudio - alsaLib + alsa-lib libcanberra-gtk3 upower colord diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-shell-extensions/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-shell-extensions/default.nix index 6e8168a306..9ccaf8bd63 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-shell-extensions/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-shell-extensions/default.nix @@ -13,11 +13,11 @@ stdenv.mkDerivation rec { pname = "gnome-shell-extensions"; - version = "40.1"; + version = "40.2"; src = fetchurl { url = "mirror://gnome/sources/gnome-shell-extensions/${lib.versions.major version}/${pname}-${version}.tar.xz"; - sha256 = "T7/OCtQ1e+5zrn3Bjqoe9MqnOF5PlPavuN/HJR/RqL8="; + sha256 = "qFGN1Mg6eE+o05pe1gC/gdY3oY7r5ZDjticYPgv5FPg="; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-software/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-software/default.nix index 64cd214e80..226b251ec4 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-software/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/core/gnome-software/default.nix @@ -43,11 +43,11 @@ in stdenv.mkDerivation rec { pname = "gnome-software"; - version = "40.1"; + version = "40.2"; src = fetchurl { url = "mirror://gnome/sources/gnome-software/${lib.versions.major version}/${pname}-${version}.tar.xz"; - sha256 = "16q2902swxsjdxb1nj335sv1bb76rvq4w6dn4yszkwf3s0fd86in"; + sha256 = "y9HdKguvw/U93kIAPEpKA3RsuNZNxdJ+uNvmc27nJ5Y="; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/extensions/dash-to-panel/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/extensions/dash-to-panel/default.nix index 440b8d76b1..728f341589 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/extensions/dash-to-panel/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/extensions/dash-to-panel/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "gnome-shell-extension-dash-to-panel"; - version = "40"; + version = "43"; src = fetchFromGitHub { owner = "home-sweet-gnome"; repo = "dash-to-panel"; rev = "v${version}"; - sha256 = "07jq8d16nn62ikis896nyfn3q02f5srj754fmiblhz472q4ljc3p"; + sha256 = "08n6lwcj943p0vzi2vif7j3nza6xg5z1yka68vwc34ia9ys352m7"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/extensions/gsconnect/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/extensions/gsconnect/default.nix index 8906ebcdde..a777da990d 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/extensions/gsconnect/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/extensions/gsconnect/default.nix @@ -110,7 +110,7 @@ stdenv.mkDerivation rec { description = "KDE Connect implementation for Gnome Shell"; homepage = "https://github.com/andyholmes/gnome-shell-extension-gsconnect/wiki"; license = licenses.gpl2Plus; - maintainers = with maintainers; [ etu ]; + maintainers = teams.gnome.members; platforms = platforms.linux; }; } diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/extensions/night-theme-switcher/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/extensions/night-theme-switcher/default.nix index fd0d2dbb57..a7ee6d566d 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/extensions/night-theme-switcher/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/extensions/night-theme-switcher/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "gnome-shell-extension-night-theme-switcher"; - version = "40"; + version = "50"; src = fetchFromGitLab { owner = "rmnvgr"; repo = "nightthemeswitcher-gnome-shell-extension"; rev = "v${version}"; - sha256 = "0z11y18bgdc0y41hrrzzgi4lagm2cg06x12jgdnary1ycng7xja0"; + sha256 = "0rs08kr3wizs1vpkmm6pbcvnn7rz47yrq7vnb1s8d58yda9a850d"; }; nativeBuildInputs = [ unzip ]; @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "Automatically change the GTK theme to dark variant when Night Light activates"; - license = licenses.gpl3; + license = licenses.gpl3Plus; maintainers = with maintainers; [ jonafato ]; homepage = "https://gitlab.com/rmnvgr/nightthemeswitcher-gnome-shell-extension/"; }; diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/extensions/system-monitor/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/extensions/system-monitor/default.nix index d141ab9dca..0a959de268 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/extensions/system-monitor/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/extensions/system-monitor/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "gnome-shell-extension-system-monitor"; - version = "unstable-2021-05-04"; + version = "unstable-2021-06-19"; src = fetchFromGitHub { owner = "paradoxxxzero"; repo = "gnome-shell-system-monitor-applet"; - rev = "bc38ccf49ac0ffae0fc0436f3c2579fc86949f10"; - sha256 = "0yb5sb2xv4m18a24h4daahnxgnlmbfa0rfzic0zs082qv1kfi5h8"; + rev = "bece7be22352b81d3d81e64e18a385812851b8de"; + sha256 = "08nnsg7z3cqk25hfgy4wm02hd2wpz13kig498kn4mf5f1q4hslmx"; }; buildInputs = [ @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { patches = [ (substituteAll { src = ./paths_and_nonexisting_dirs.patch; - clutter_path = gnome.mutter.libdir; # this should not be used in settings but 🤷‍♀️ + clutter_path = gnome.mutter.libdir; # only needed for GNOME < 40. gtop_path = "${libgtop}/lib/girepository-1.0"; glib_net_path = "${glib-networking}/lib/girepository-1.0"; }) diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/extensions/unite/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/extensions/unite/default.nix index 1fbd31ec10..228cb70615 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/extensions/unite/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/extensions/unite/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "gnome-shell-extension-unite"; - version = "53"; + version = "54"; src = fetchFromGitHub { owner = "hardpixel"; repo = "unite-shell"; rev = "v${version}"; - sha256 = "0fw9wqf362h2yd67fhgbhqx0b2fwcl25wxmb92dqwigxjcj0dnw6"; + sha256 = "sha256-Ys2kWPj/FugW/LkvLAZdbj7Ufg/KShC+EX6QrjKNVH8="; }; uuid = "unite@hardpixel.eu"; diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/games/aisleriot/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/games/aisleriot/default.nix index bdd7c9cc1a..18bfea263f 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/games/aisleriot/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/games/aisleriot/default.nix @@ -19,14 +19,14 @@ stdenv.mkDerivation rec { pname = "aisleriot"; - version = "3.22.16"; + version = "3.22.17"; src = fetchFromGitLab { domain = "gitlab.gnome.org"; owner = "GNOME"; repo = pname; rev = version; - sha256 = "0arjnm5kgnb4pir53hlm94iym80d0srs256sm2hwhwwc5fr1w79i"; + sha256 = "sha256-14z/EdEz1XFDrQZlpoeHW73G187XuZX/uQXp+bAUsmI="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/games/atomix/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/games/atomix/default.nix index 43d9aaa768..e57191f0a1 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/games/atomix/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/games/atomix/default.nix @@ -1,14 +1,12 @@ { lib, stdenv, fetchurl, meson, ninja, pkg-config, wrapGAppsHook, python3 , gettext, gnome, glib, gtk3, libgnome-games-support, gdk-pixbuf }: -let +stdenv.mkDerivation rec { pname = "atomix"; version = "3.34.0"; -in stdenv.mkDerivation rec { - name = "${pname}-${version}"; src = fetchurl { - url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${name}.tar.xz"; + url = "mirror://gnome/sources/atomix/${lib.versions.majorMinor version}/atomix-${version}.tar.xz"; sha256 = "0h909a4mccf160hi0aimyicqhq2b0gk1dmqp7qwf87qghfrw6m00"; }; diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/games/gnome-klotski/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/games/gnome-klotski/default.nix index bb4cdae8fa..e21cceb085 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/games/gnome-klotski/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/games/gnome-klotski/default.nix @@ -3,14 +3,12 @@ , meson, ninja, python3 }: -let +stdenv.mkDerivation rec { pname = "gnome-klotski"; version = "3.38.2"; -in stdenv.mkDerivation rec { - name = "${pname}-${version}"; src = fetchurl { - url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${name}.tar.xz"; + url = "mirror://gnome/sources/gnome-klotski/${lib.versions.majorMinor version}/gnome-klotski-${version}.tar.xz"; sha256 = "1qm01hdd5yp8chig62bj10912vclbdvywwczs84sfg4zci2phqwi"; }; diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/misc/gnome-applets/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/misc/gnome-applets/default.nix index d414266a9d..f581017dd5 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/misc/gnome-applets/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/misc/gnome-applets/default.nix @@ -7,7 +7,7 @@ , gnome-panel , gtk3 , glib -, libwnck3 +, libwnck , libgtop , libnotify , upower @@ -42,7 +42,7 @@ stdenv.mkDerivation rec { gtk3 glib libxml2 - libwnck3 + libwnck libgtop libnotify upower diff --git a/third_party/nixpkgs/pkgs/desktops/gnome/misc/gnome-panel/default.nix b/third_party/nixpkgs/pkgs/desktops/gnome/misc/gnome-panel/default.nix index 8ab1a87d01..2e33be766b 100644 --- a/third_party/nixpkgs/pkgs/desktops/gnome/misc/gnome-panel/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/gnome/misc/gnome-panel/default.nix @@ -13,7 +13,7 @@ , itstool , libgweather , libsoup -, libwnck3 +, libwnck , libxml2 , pkg-config , polkit @@ -75,7 +75,7 @@ stdenv.mkDerivation rec { gtk3 libgweather libsoup - libwnck3 + libwnck polkit systemd ]; diff --git a/third_party/nixpkgs/pkgs/desktops/lxde/core/lxpanel/default.nix b/third_party/nixpkgs/pkgs/desktops/lxde/core/lxpanel/default.nix index 15a3d918b9..1208f9cd64 100644 --- a/third_party/nixpkgs/pkgs/desktops/lxde/core/lxpanel/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/lxde/core/lxpanel/default.nix @@ -10,7 +10,7 @@ , gtk2 , libX11 , libfm -, libwnck +, libwnck2 , libXmu , libXpm , cairo @@ -20,7 +20,7 @@ , lxmenu-data , wirelesstools , curl -, supportAlsa ? false, alsaLib +, supportAlsa ? false, alsa-lib }: stdenv.mkDerivation rec { @@ -38,7 +38,7 @@ stdenv.mkDerivation rec { gtk2 libX11 libfm - libwnck + libwnck2 libXmu libXpm cairo @@ -49,7 +49,7 @@ stdenv.mkDerivation rec { m4 wirelesstools curl - ] ++ lib.optional supportAlsa alsaLib; + ] ++ lib.optional supportAlsa alsa-lib; postPatch = '' substituteInPlace src/Makefile.in \ diff --git a/third_party/nixpkgs/pkgs/desktops/lxqt/lxqt-panel/default.nix b/third_party/nixpkgs/pkgs/desktops/lxqt/lxqt-panel/default.nix index c565c5b4c3..34578e6bc5 100644 --- a/third_party/nixpkgs/pkgs/desktops/lxqt/lxqt-panel/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/lxqt/lxqt-panel/default.nix @@ -3,7 +3,7 @@ , fetchFromGitHub , cmake , pkg-config -, alsaLib +, alsa-lib , kguiaddons , kwindowsystem , libXdamage @@ -46,7 +46,7 @@ mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib kguiaddons kwindowsystem libXdamage diff --git a/third_party/nixpkgs/pkgs/desktops/mate/libmatemixer/default.nix b/third_party/nixpkgs/pkgs/desktops/mate/libmatemixer/default.nix index 9d42c23c71..4fe73fadbc 100644 --- a/third_party/nixpkgs/pkgs/desktops/mate/libmatemixer/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/mate/libmatemixer/default.nix @@ -1,5 +1,5 @@ { config, lib, stdenv, fetchurl, pkg-config, gettext, glib -, alsaSupport ? stdenv.isLinux, alsaLib +, alsaSupport ? stdenv.isLinux, alsa-lib , pulseaudioSupport ? config.pulseaudio or true, libpulseaudio , ossSupport ? false , mateUpdateScript @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config gettext ]; buildInputs = [ glib ] - ++ lib.optional alsaSupport alsaLib + ++ lib.optional alsaSupport alsa-lib ++ lib.optional pulseaudioSupport libpulseaudio; configureFlags = lib.optional ossSupport "--enable-oss"; diff --git a/third_party/nixpkgs/pkgs/desktops/mate/mate-applets/default.nix b/third_party/nixpkgs/pkgs/desktops/mate/mate-applets/default.nix index ccd20a6b87..3a34d7af71 100644 --- a/third_party/nixpkgs/pkgs/desktops/mate/mate-applets/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/mate/mate-applets/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, pkg-config, gettext, itstool, gnome, glib, gtk3, gtksourceview3, libwnck3 +{ lib, stdenv, fetchurl, pkg-config, gettext, itstool, gnome, glib, gtk3, gtksourceview3, libwnck , libgtop, libxml2, libnotify, polkit, upower, wirelesstools, mate, hicolor-icon-theme, wrapGAppsHook , mateUpdateScript }: @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { gtk3 gtksourceview3 gnome.gucharmap - libwnck3 + libwnck libgtop libxml2 libnotify diff --git a/third_party/nixpkgs/pkgs/desktops/mate/mate-netbook/default.nix b/third_party/nixpkgs/pkgs/desktops/mate/mate-netbook/default.nix index 9b7a5ae671..de452f456a 100644 --- a/third_party/nixpkgs/pkgs/desktops/mate/mate-netbook/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/mate/mate-netbook/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, pkg-config, gettext, gtk3, libwnck3, libfakekey, libXtst, mate, wrapGAppsHook, mateUpdateScript }: +{ lib, stdenv, fetchurl, pkg-config, gettext, gtk3, libwnck, libfakekey, libXtst, mate, wrapGAppsHook, mateUpdateScript }: stdenv.mkDerivation rec { pname = "mate-netbook"; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { buildInputs = [ gtk3 - libwnck3 + libwnck libfakekey libXtst mate.mate-panel diff --git a/third_party/nixpkgs/pkgs/desktops/mate/mate-notification-daemon/default.nix b/third_party/nixpkgs/pkgs/desktops/mate/mate-notification-daemon/default.nix index 62181418fd..ac5e5376a8 100644 --- a/third_party/nixpkgs/pkgs/desktops/mate/mate-notification-daemon/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/mate/mate-notification-daemon/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, pkg-config, gettext, glib, libcanberra-gtk3, - libnotify, libwnck3, gtk3, libxml2, wrapGAppsHook, mateUpdateScript }: + libnotify, libwnck, gtk3, libxml2, wrapGAppsHook, mateUpdateScript }: stdenv.mkDerivation rec { pname = "mate-notification-daemon"; @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { buildInputs = [ libcanberra-gtk3 libnotify - libwnck3 + libwnck gtk3 ]; diff --git a/third_party/nixpkgs/pkgs/desktops/mate/mate-panel/default.nix b/third_party/nixpkgs/pkgs/desktops/mate/mate-panel/default.nix index 328fcfd20d..cd73408d4c 100644 --- a/third_party/nixpkgs/pkgs/desktops/mate/mate-panel/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/mate/mate-panel/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, pkg-config, gettext, itstool, glib, libwnck3, librsvg, libxml2, dconf, gtk3, mate, hicolor-icon-theme, gobject-introspection, wrapGAppsHook, mateUpdateScript }: +{ lib, stdenv, fetchurl, pkg-config, gettext, itstool, glib, libwnck, librsvg, libxml2, dconf, gtk3, mate, hicolor-icon-theme, gobject-introspection, wrapGAppsHook, mateUpdateScript }: stdenv.mkDerivation rec { pname = "mate-panel"; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { buildInputs = [ glib - libwnck3 + libwnck librsvg libxml2 gtk3 diff --git a/third_party/nixpkgs/pkgs/desktops/mate/mate-system-monitor/default.nix b/third_party/nixpkgs/pkgs/desktops/mate/mate-system-monitor/default.nix index 4527c91eed..fed7dc1262 100644 --- a/third_party/nixpkgs/pkgs/desktops/mate/mate-system-monitor/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/mate/mate-system-monitor/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, pkg-config, gettext, itstool, gtkmm3, libxml2, libgtop, libwnck3, librsvg, polkit, systemd, wrapGAppsHook, mateUpdateScript }: +{ lib, stdenv, fetchurl, pkg-config, gettext, itstool, gtkmm3, libxml2, libgtop, libwnck, librsvg, polkit, systemd, wrapGAppsHook, mateUpdateScript }: stdenv.mkDerivation rec { pname = "mate-system-monitor"; @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { gtkmm3 libxml2 libgtop - libwnck3 + libwnck librsvg polkit systemd diff --git a/third_party/nixpkgs/pkgs/desktops/pantheon/apps/elementary-dock/default.nix b/third_party/nixpkgs/pkgs/desktops/pantheon/apps/elementary-dock/default.nix index db6633aa5b..797f62cf8e 100644 --- a/third_party/nixpkgs/pkgs/desktops/pantheon/apps/elementary-dock/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/pantheon/apps/elementary-dock/default.nix @@ -7,7 +7,7 @@ , dconf , glib , gtk3 -, libwnck3 +, libwnck , libX11 , libXfixes , libXi @@ -73,7 +73,7 @@ stdenv.mkDerivation rec { libXi libdbusmenu-gtk3 libgee - libwnck3 + libwnck pango ]; diff --git a/third_party/nixpkgs/pkgs/desktops/pantheon/apps/elementary-mail/default.nix b/third_party/nixpkgs/pkgs/desktops/pantheon/apps/elementary-mail/default.nix new file mode 100644 index 0000000000..b909f2472a --- /dev/null +++ b/third_party/nixpkgs/pkgs/desktops/pantheon/apps/elementary-mail/default.nix @@ -0,0 +1,82 @@ +{ lib, stdenv +, fetchFromGitHub +, nix-update-script +, pantheon +, pkg-config +, meson +, ninja +, python3 +, vala +, desktop-file-utils +, gtk3 +, libxml2 +, libhandy +, webkitgtk +, folks +, libgdata +, sqlite +, granite +, elementary-icon-theme +, evolution-data-server +, appstream +, wrapGAppsHook +, libgee +}: + +stdenv.mkDerivation rec { + pname = "elementary-mail"; + version = "unstable-2021-06-21"; + + repoName = "mail"; + + src = fetchFromGitHub { + owner = "elementary"; + repo = repoName; + rev = "c64c87fabb31dea8dc388152d5a835401993acf4"; + sha256 = "yEUg1IbYbzOJiklnqR23X+aGVE9j4F9iH8FkmlB15x4="; + }; + + passthru = { + updateScript = nix-update-script { + attrPath = "pantheon.${pname}"; + }; + }; + + nativeBuildInputs = [ + appstream + desktop-file-utils + libxml2 + meson + ninja + pkg-config + python3 + vala + wrapGAppsHook + ]; + + buildInputs = [ + elementary-icon-theme + evolution-data-server + folks + granite + gtk3 + libgdata + libgee + libhandy + sqlite + webkitgtk + ]; + + postPatch = '' + chmod +x meson/post_install.py + patchShebangs meson/post_install.py + ''; + + meta = with lib; { + description = "Mail app designed for elementary OS"; + homepage = "https://github.com/elementary/mail"; + license = licenses.gpl3Plus; + platforms = platforms.linux; + maintainers = pantheon.maintainers ++ [ maintainers.ethancedwards8 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/desktops/pantheon/default.nix b/third_party/nixpkgs/pkgs/desktops/pantheon/default.nix index 82d6a87b10..5ff368a642 100644 --- a/third_party/nixpkgs/pkgs/desktops/pantheon/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/pantheon/default.nix @@ -49,6 +49,8 @@ lib.makeScope pkgs.newScope (self: with self; { elementary-feedback = callPackage ./apps/elementary-feedback { }; + elementary-mail = callPackage ./apps/elementary-mail { }; + elementary-music = callPackage ./apps/elementary-music { }; elementary-photos = callPackage ./apps/elementary-photos { }; diff --git a/third_party/nixpkgs/pkgs/desktops/pantheon/services/elementary-settings-daemon/default.nix b/third_party/nixpkgs/pkgs/desktops/pantheon/services/elementary-settings-daemon/default.nix index 43fd7a69e8..568414aab3 100644 --- a/third_party/nixpkgs/pkgs/desktops/pantheon/services/elementary-settings-daemon/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/pantheon/services/elementary-settings-daemon/default.nix @@ -15,7 +15,7 @@ , libgnomekbd , lcms2 , libpulseaudio -, alsaLib +, alsa-lib , libcanberra-gtk3 , upower , colord @@ -105,7 +105,7 @@ stdenv.mkDerivation rec { buildInputs = [ accountsservice - alsaLib + alsa-lib colord gcr geoclue2 diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/catfish/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/catfish/default.nix index e76ffa7204..072181595a 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/catfish/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/catfish/default.nix @@ -9,7 +9,7 @@ python3Packages.buildPythonApplication rec { src = fetchurl { url = "https://archive.xfce.org/src/apps/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "0fg89946z6n8njxn4mv29jksw8yavg8vypsljn9031pjwl3fmh2q"; + sha256 = "sha256-WMDqBuXyhgGSlVRfv9HbyiOup0xiV2K7tMiab0hK6Dk="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/gigolo/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/gigolo/default.nix index 4b7c258ca5..84fec43b3c 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/gigolo/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/gigolo/default.nix @@ -6,7 +6,7 @@ mkXfceDerivation { version = "0.5.2"; odd-unstable = false; - sha256 = "8UDb4H3zxRKx2y+MRsozQoR3es0fs5ooR/5wBIE11bY="; + sha256 = "sha256-8UDb4H3zxRKx2y+MRsozQoR3es0fs5ooR/5wBIE11bY="; buildInputs = [ gtk3 glib ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/mousepad/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/mousepad/default.nix index 33666c53bb..11ef1c6841 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/mousepad/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/mousepad/default.nix @@ -6,7 +6,7 @@ mkXfceDerivation { version = "0.5.5"; odd-unstable = false; - sha256 = "1c985xb3395bn1024qhqqdnlkbn02zldsnybxsw49xqh55pa4a2n"; + sha256 = "sha256-ViiibikQ90S47stb3egXwK5JbcMYYiJAsKukMVYvKLE="; nativeBuildInputs = [ gobject-introspection ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/orage/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/orage/default.nix index 4550045072..f2747c9c62 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/orage/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/orage/default.nix @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://archive.xfce.org/src/apps/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "0qlhvnl2m33vfxqlbkic2nmfpwyd4mq230jzhs48cg78392amy9w"; + sha256 = "sha256-PPmqRBroPIaIhl+CIXAlzfPrqhUszkVxd3uMKqjdkGI="; }; nativeBuildInputs = [ pkg-config intltool wrapGAppsHook ]; @@ -34,7 +34,7 @@ stdenv.mkDerivation rec { (fetchpatch { name = "fix-libical3.patch"; url = "https://aur.archlinux.org/cgit/aur.git/plain/libical3.patch?h=orage-4.10"; - sha256 = "1l8s106mcidmbx2p8c2pi8v9ngbv2x3fsgv36j8qk8wyd4qd1jbf"; + sha256 = "sha256-bsnQMGmeo4mRNGM/7UYXez2bNopXMHRFX7VFVg0IGtE="; }) ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/parole/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/parole/default.nix index 5c55a22ea7..8ea2180dea 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/parole/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/parole/default.nix @@ -9,7 +9,7 @@ mkXfceDerivation { pname = "parole"; version = "4.16.0"; - sha256 = "07hcnbcd56lq7z3gq1cnk71ppy98hwdvlfp5z3zlc55cqrry26zm"; + sha256 = "sha256-9Rvhc8asFEb/+OU6uhuHKPl7w5mWBfzGP5ia0tiyDB4="; postPatch = '' substituteInPlace src/plugins/mpris2/Makefile.am \ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/ristretto/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/ristretto/default.nix index e439c3d055..d938dc8a52 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/ristretto/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/ristretto/default.nix @@ -4,17 +4,12 @@ mkXfceDerivation { category = "apps"; pname = "ristretto"; - version = "0.10.0"; + version = "0.11.0"; - sha256 = "07h7wbq3xh2ac6q4kp2ai1incfn0zfxxngap7hzqx47a5xw2mrm8"; + sha256 = "sha256-7hVoQ2cgWTTWMch9CSliAhRDh3qKrMzUaZeaN40l1x4="; buildInputs = [ glib gtk3 libexif libxfce4ui libxfce4util xfconf ]; - postPatch = '' - # exo-csource has been dropped from exo - substituteInPlace src/Makefile.am --replace exo-csource xdt-csource - ''; - meta = { description = "A fast and lightweight picture-viewer for the Xfce desktop environment"; }; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfburn/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfburn/default.nix index 8aff25df49..f44769ddd6 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfburn/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfburn/default.nix @@ -5,7 +5,7 @@ mkXfceDerivation { pname = "xfburn"; version = "0.6.2"; - sha256 = "02axhsbbsvd31jb0xs1d2qxr614qb29pajv0sm2p1n1c2cv2fjh1"; + sha256 = "sha256-AUonNhMs2HBF1WBLdZNYmASTOxYt6A6WDKNtvZaGXQk="; nativeBuildInputs = [ libxslt docbook_xsl ]; buildInputs = [ exo gtk3 libburn libisofs libxfce4ui ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-dict/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-dict/default.nix index 6761d2ed5c..94f6f7c5dd 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-dict/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-dict/default.nix @@ -5,7 +5,7 @@ mkXfceDerivation { pname = "xfce4-dict"; version = "0.8.4"; - sha256 = "0gm5gwqxhnv3qz9ggf8dj1sq5s72xcliidkyip9l91msx03hfjah"; + sha256 = "sha256-UEkHB+i6hkTTjX62GCnr4uiCdZANuffSx2Nb2DF/pT4="; patches = [ ./configure-gio.patch ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-notifyd/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-notifyd/default.nix index 64ab34d2b6..e28c169b26 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-notifyd/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-notifyd/default.nix @@ -6,7 +6,7 @@ mkXfceDerivation { pname = "xfce4-notifyd"; version = "0.6.2"; - sha256 = "1q8n7dffyqbfyy6vpqlmnsfpavlc7iz6hhv1h27fkwzswy2rx28s"; + sha256 = "sha256-Gomehef68+mOgGFDaH48jG51nbaV4ruN925h71w7FuE="; buildInputs = [ exo gtk3 glib libnotify libxfce4ui libxfce4util xfce4-panel xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-screenshooter/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-screenshooter/default.nix index 3098b9c756..f381b2d618 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-screenshooter/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-screenshooter/default.nix @@ -3,10 +3,10 @@ mkXfceDerivation { category = "apps"; pname = "xfce4-screenshooter"; - version = "1.9.8"; + version = "1.9.9"; odd-unstable = false; - sha256 = "0pbzjcaxm8gk0s75s99kvzygmih4yghp7ngf2mxymjiywcxqr40d"; + sha256 = "sha256-QOYJl+bxRk0+spgtGADPgkw2lPLfQOwTZQuZNHWq39c="; buildInputs = [ exo gtk3 libsoup libxfce4ui libxfce4util xfce4-panel glib-networking ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-taskmanager/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-taskmanager/default.nix index 5a1510eaa8..6c7e0b2968 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-taskmanager/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-taskmanager/default.nix @@ -1,14 +1,14 @@ -{ mkXfceDerivation, exo, gtk3, libwnck3, libXmu }: +{ mkXfceDerivation, exo, gtk3, libwnck, libXmu }: mkXfceDerivation { category = "apps"; pname = "xfce4-taskmanager"; version = "1.4.2"; - sha256 = "1l7k00y3d9j38g4hxjrcrh1y4s6s77sq4sjcadsbpzs6zdf05hld"; + sha256 = "sha256-jcICXPtG/7t0U0xqgvU52mjiA8wsyw7JQ0OmNjwA89A="; nativeBuildInputs = [ exo ]; - buildInputs = [ gtk3 libwnck3 libXmu ]; + buildInputs = [ gtk3 libwnck libXmu ]; meta = { description = "Easy to use task manager for Xfce"; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-terminal/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-terminal/default.nix index 19d98f84e3..ce0c2d1f3c 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-terminal/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-terminal/default.nix @@ -5,7 +5,7 @@ mkXfceDerivation { pname = "xfce4-terminal"; version = "0.8.10"; - sha256 = "0v58qcrdpqpd2nbwlc4ra7j9nkvfzfhb1zcp1kggbn627q86i0ql"; + sha256 = "sha256-FINoED7C2PXeDJf9sKD7bk+b5FGZMMqXFe3i2zLDqGw="; nativeBuildInputs = [ libxslt docbook_xml_dtd_45 docbook_xsl ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-volumed-pulse/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-volumed-pulse/default.nix index 413c04a84c..fc9328e0e2 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-volumed-pulse/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfce4-volumed-pulse/default.nix @@ -5,7 +5,7 @@ mkXfceDerivation { pname = "xfce4-volumed-pulse"; version = "0.2.3"; - sha256 = "1rsjng9qmq7vzrx5bfxq76h63y501cfl1mksrxkf1x39by9r628j"; + sha256 = "sha256-EgmTk19p9OBmz3rWQB0LoPhhoDm4u1V6/vvgitOzUuc="; buildInputs = [ gtk3 libnotify libpulseaudio keybinder3 xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfdashboard/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfdashboard/default.nix index bef18e3e50..493a70a75e 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfdashboard/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/applications/xfdashboard/default.nix @@ -4,7 +4,7 @@ , libXinerama , libXdamage , libX11 -, libwnck3 +, libwnck , libxfce4ui , libxfce4util , garcon @@ -21,7 +21,7 @@ mkXfceDerivation { rev-prefix = ""; odd-unstable = false; - sha256 = "06pvzhhkr2mimsrzlkpsrzf5fxag4fhabyb3cpmgpyp5hcbgvaj3"; + sha256 = "sha256-Q6r9FoPl+vvqZWP5paAjT3VX3M/6TvqzrrGKPCH8+xo="; buildInputs = [ clutter @@ -33,7 +33,7 @@ mkXfceDerivation { libXcomposite libXdamage libXinerama - libwnck3 + libwnck libxfce4ui libxfce4util xfconf diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/art/xfce4-icon-theme/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/art/xfce4-icon-theme/default.nix index a2339d5856..6ece5d68c5 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/art/xfce4-icon-theme/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/art/xfce4-icon-theme/default.nix @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "1yk6rx3zr9grm4jwpjvqdkl13pisy7qn1wm5cqzmd2kbsn96cy6l"; + sha256 = "sha256-1HhmktVrilY/ZqXyYPHxOt4R6Gx4y8slqfml/EfPZvo="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/art/xfwm4-themes/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/art/xfwm4-themes/default.nix index 31623598d3..5548be8f4a 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/art/xfwm4-themes/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/art/xfwm4-themes/default.nix @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "0xfmdykav4rf6gdxbd6fhmrfrvbdc1yjihz7r7lba0wp1vqda51j"; + sha256 = "sha256-MhTV8A6XA7XoyefDKH1gbe3scoXOtNXbMy6TraZv1XU="; }; passthru.updateScript = xfce.updateScript { diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/exo/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/exo/default.nix index 962170a176..3ab53444a4 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/exo/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/exo/default.nix @@ -6,7 +6,7 @@ mkXfceDerivation { pname = "exo"; version = "4.16.2"; - sha256 = "0rsp92j4hkr5jrkrj8anzw9fwd96xbxzpzqzqiyjjwdiq7b29l1v"; + sha256 = "sha256-O9Ak1sGxcSl9xB//+/vqJjXuEv9WIZlnliVPSKRIV2c="; nativeBuildInputs = [ libxslt diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/garcon/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/garcon/default.nix index 56ce6ac8aa..a3ff8e0afd 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/garcon/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/garcon/default.nix @@ -5,7 +5,7 @@ mkXfceDerivation { pname = "garcon"; version = "4.16.1"; - sha256 = "134nm1754i12axl4si60fdwkbk2v6z108nrj9c0lb5in1zmqwa9a"; + sha256 = "sha256-KimO6w82lkUBSzJbBMI3W8w1eXPARE1oVyJEUk6olow="; nativeBuildInputs = [ gobject-introspection ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/libxfce4ui/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/libxfce4ui/default.nix index e17880f1b1..99cb0e7cc6 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/libxfce4ui/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/libxfce4ui/default.nix @@ -6,7 +6,7 @@ mkXfceDerivation { pname = "libxfce4ui"; version = "4.16.0"; - sha256 = "0a9wfdpsv83giwv6kcidvpd6c665aa7sv6f2l1q6qcq214vb0rk2"; + sha256 = "sha256-YmawNgkCM2xwoMKZrY9SxRhm2t0tsmk2j2+grW9zPCk="; nativeBuildInputs = [ gobject-introspection vala ]; buildInputs = [ gtk3 libstartup_notification libgtop epoxy xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/libxfce4util/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/libxfce4util/default.nix index 69c3921285..638c3a3158 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/libxfce4util/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/libxfce4util/default.nix @@ -5,7 +5,7 @@ mkXfceDerivation { pname = "libxfce4util"; version = "4.16.0"; - sha256 = "1p0snipc81dhaq5glv7c1zfq5pcvgq7nikl4ikhfm2af9picfsxb"; + sha256 = "sha256-q2vH4k1OiergjITOaA9+m92C3Q/sbPoKVrAFxG60Gtw="; nativeBuildInputs = [ gobject-introspection vala ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/thunar-volman/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/thunar-volman/default.nix index 6ceca34b1b..31d25f97d3 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/thunar-volman/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/thunar-volman/default.nix @@ -7,7 +7,7 @@ mkXfceDerivation { buildInputs = [ exo gtk3 libgudev libxfce4ui libxfce4util xfconf ]; - sha256 = "002nkxsvcq384dgpj7lv3bmb21ks64hsq13l67z1dcjbj51hzl03"; + sha256 = "sha256-A9APQ5FLshb+MXQErCExegax6hqbHnlfI2hgtnWfVgA="; odd-unstable = false; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/thunar/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/thunar/default.nix index 4e6072c711..7efc64e942 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/thunar/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/thunar/default.nix @@ -10,6 +10,7 @@ , libxfce4ui , libxfce4util , libxslt +, pcre , xfconf , gobject-introspection , makeWrapper @@ -22,7 +23,7 @@ let unwrapped = mkXfceDerivation { pname = "thunar"; version = "4.16.8"; - sha256 = "1r7qkd6l0mgf97m1xnnizm7fkvl4a52r3hsds5z68y6myvb78p18"; + sha256 = "sha256-KFx01vbVeGR+0U3DkUVRhO7pTv3R2h7qSe5VQE2b+OQ="; nativeBuildInputs = [ docbook_xsl @@ -39,6 +40,7 @@ let unwrapped = mkXfceDerivation { libnotify libxfce4ui libxfce4util + pcre xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/tumbler/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/tumbler/default.nix index 510d30ae63..a9642b3b52 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/tumbler/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/tumbler/default.nix @@ -15,7 +15,7 @@ mkXfceDerivation { pname = "tumbler"; version = "4.16.0"; - sha256 = "1z4q858afj3yksim4lc96wylgvymv4cv6iw41qdxl5xd6ii2ddr4"; + sha256 = "sha256-JLcmYjStF9obDoRHsxnZ1e9HPTeJUVKjnn5Ip1BBmPw="; buildInputs = [ ffmpegthumbnailer diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-appfinder/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-appfinder/default.nix index 01cc70e3b9..4d0f61863e 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-appfinder/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-appfinder/default.nix @@ -5,7 +5,7 @@ mkXfceDerivation { pname = "xfce4-appfinder"; version = "4.16.1"; - sha256 = "1r7sjdavqadrpgxqclrznds7a1c2i7mlvghx5mi6qqnh42425gsy"; + sha256 = "sha256-Xr8iiCDQYmxiLR2+TeuJggV1dLM/U4b7u7kpvFWT+uQ="; nativeBuildInputs = [ exo ]; buildInputs = [ garcon gtk3 libxfce4ui libxfce4util xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-dev-tools/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-dev-tools/default.nix index 9b3f443ba3..fc8263abb4 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-dev-tools/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-dev-tools/default.nix @@ -15,7 +15,7 @@ mkXfceDerivation { pname = "xfce4-dev-tools"; version = "4.16.0"; - sha256 = "0w47npi1np9vb7lhzjr680aa1xb8ch6kcbg0l0bqnpm0y0jmvgz6"; + sha256 = "sha256-5r9dJfCgXosXoOAtNg1kaPWgFEAmyw/pWTtdG+K1h3A="; nativeBuildInputs = [ autoreconfHook diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-panel/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-panel/default.nix index d0b1862c3f..417241235b 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-panel/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-panel/default.nix @@ -5,7 +5,7 @@ , gobject-introspection , gtk3 , libdbusmenu-gtk3 -, libwnck3 +, libwnck , libxfce4ui , libxfce4util , tzdata @@ -18,7 +18,7 @@ mkXfceDerivation { pname = "xfce4-panel"; version = "4.16.3"; - sha256 = "085hxllsf792sgi8nn0qjfj5vclbrw2dgrgzl6gy55lxcbhkml9x"; + sha256 = "sha256-PdE64WKdluKfof/l1wTPi7JdpJMYWIvi0yIdpyntsCA="; nativeBuildInputs = [ gobject-introspection @@ -30,7 +30,7 @@ mkXfceDerivation { garcon libdbusmenu-gtk3 libxfce4ui - libwnck3 + libwnck xfconf tzdata ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-power-manager/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-power-manager/default.nix index 709b6a2a0c..9877027c40 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-power-manager/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-power-manager/default.nix @@ -1,15 +1,15 @@ { mkXfceDerivation, automakeAddFlags, exo, gtk3, libnotify -, libxfce4ui, libxfce4util, upower, xfconf }: +, libxfce4ui, libxfce4util, upower, xfconf, xfce4-panel }: mkXfceDerivation { category = "xfce"; pname = "xfce4-power-manager"; version = "4.16.0"; - sha256 = "1rfw07xbv83rfb0mz3ayanlcvnaq7xpl2znsyya0hspysvavwks2"; + sha256 = "sha256-Qk++1db+agiU99p+QW8/WNnNqFVejV/BcnmgvfoB3OU="; nativeBuildInputs = [ automakeAddFlags exo ]; - buildInputs = [ gtk3 libnotify libxfce4ui libxfce4util upower xfconf ]; + buildInputs = [ gtk3 libnotify libxfce4ui libxfce4util upower xfconf xfce4-panel ]; postPatch = '' substituteInPlace configure.ac.in --replace gio-2.0 gio-unix-2.0 diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-session/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-session/default.nix index 0d4c061589..27eaf94b25 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-session/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-session/default.nix @@ -1,13 +1,13 @@ -{ mkXfceDerivation, polkit, exo, libxfce4util, libxfce4ui, xfconf, iceauth, gtk3, glib, libwnck3, xfce4-session }: +{ mkXfceDerivation, polkit, exo, libxfce4util, libxfce4ui, xfconf, iceauth, gtk3, glib, libwnck, xfce4-session }: mkXfceDerivation { category = "xfce"; pname = "xfce4-session"; version = "4.16.0"; - sha256 = "0b8vkcqn2arjp6qdwmzr0f84n8fjgy2kbf9h4gq03400ar1l111c"; + sha256 = "sha256-LIRAQ1YAkAHwIzC5NYV/0iFLkAP5V96wuTIrYTGbGy0="; - buildInputs = [ exo gtk3 glib libxfce4ui libxfce4util libwnck3 xfconf polkit iceauth ]; + buildInputs = [ exo gtk3 glib libxfce4ui libxfce4util libwnck xfconf polkit iceauth ]; configureFlags = [ "--with-xsession-prefix=${placeholder "out"}" ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-settings/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-settings/default.nix index cca8070803..61382ba8c5 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-settings/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfce4-settings/default.nix @@ -5,9 +5,9 @@ mkXfceDerivation { category = "xfce"; pname = "xfce4-settings"; - version = "4.16.1"; + version = "4.16.2"; - sha256 = "0mjhglfsqmiycpv98l09n2556288g2713n4pvxn0srivm017fdir"; + sha256 = "sha256-DkybMfkgsC8fJuhOWLzKO5f2Y8YtqzUXMH/npTv21yY="; postPatch = '' for f in xfsettingsd/pointers.c dialogs/mouse-settings/main.c; do diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfconf/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfconf/default.nix index 41af53c9cc..f255c5e5e5 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfconf/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfconf/default.nix @@ -5,7 +5,7 @@ mkXfceDerivation { pname = "xfconf"; version = "4.16.0"; - sha256 = "00cp2cm1w5a6k7g0fjvqx7d2iwaqw196vii9jkx1aa7mb0f2gk63"; + sha256 = "sha256-w8wnHFj1KBX6lCnGbVLgWPEo2ul4SwfemUYVHioTlwE="; nativeBuildInputs = [ gobject-introspection vala ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfdesktop/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfdesktop/default.nix index a9e461a4e6..bc6a19346e 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfdesktop/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfdesktop/default.nix @@ -1,18 +1,18 @@ -{ mkXfceDerivation, exo, gtk3, libxfce4ui, libxfce4util, libwnck3, xfconf, libnotify, garcon, thunar }: +{ mkXfceDerivation, exo, gtk3, libxfce4ui, libxfce4util, libwnck, xfconf, libnotify, garcon, thunar }: mkXfceDerivation { category = "xfce"; pname = "xfdesktop"; version = "4.16.0"; - sha256 = "1znbccr25wvizmzzgdcf719y3qc9gqdi1g4rasgrmi95427lvwn3"; + sha256 = "sha256-w/JNjyAlxZqfVpm8EBt+ieHhUziOtfd//XHzIjJjy/4="; buildInputs = [ exo gtk3 libxfce4ui libxfce4util - libwnck3 + libwnck xfconf libnotify garcon diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfwm4/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfwm4/default.nix index f8cfc55154..cc998487f1 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/core/xfwm4/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/core/xfwm4/default.nix @@ -1,5 +1,5 @@ { mkXfceDerivation, exo, librsvg, dbus-glib, epoxy, gtk3, libXdamage -, libstartup_notification, libxfce4ui, libxfce4util, libwnck3 +, libstartup_notification, libxfce4ui, libxfce4util, libwnck , libXpresent, xfconf }: mkXfceDerivation { @@ -7,7 +7,7 @@ mkXfceDerivation { pname = "xfwm4"; version = "4.16.1"; - sha256 = "1lhxm9ifkrnvn1vq3aak3kd695i1ishpryjnw617ifzawy9lj10b"; + sha256 = "sha256-CwRJk+fqu3iC4Vb6fKGOIZZk2hxTqYF3sNvm6WKqHdI="; nativeBuildInputs = [ exo librsvg ]; @@ -19,7 +19,7 @@ mkXfceDerivation { libstartup_notification libxfce4ui libxfce4util - libwnck3 + libwnck libXpresent xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/default.nix index 6ccd2a0c61..c72d20b9d8 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/default.nix @@ -35,6 +35,8 @@ lib.makeScope pkgs.newScope (self: with self; { thunar-dropbox-plugin = callPackage ./thunar-plugins/dropbox { }; + thunar-media-tags-plugin = callPackage ./thunar-plugins/media-tags { }; + tumbler = callPackage ./core/tumbler { }; xfce4-panel = callPackage ./core/xfce4-panel { }; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/mkXfceDerivation.nix b/third_party/nixpkgs/pkgs/desktops/xfce/mkXfceDerivation.nix index a9f30ebfab..8ff0d83cae 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/mkXfceDerivation.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/mkXfceDerivation.nix @@ -47,7 +47,7 @@ let }; meta = with lib; { - homepage = "https://gitlab.xfce.org/${category}/${pname}/about"; + homepage = "https://gitlab.xfce.org/${category}/${pname}"; license = licenses.gpl2Plus; # some libraries are under LGPLv2+ platforms = platforms.linux; }; @@ -57,3 +57,4 @@ let in stdenv.mkDerivation (recursiveUpdate template publicArgs // concatAttrLists [ template args ]) +# TODO [ AndersonTorres ]: verify if it allows using hash attribute as an option to sha256 diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-battery-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-battery-plugin/default.nix index 0d047447e0..ffb0118ede 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-battery-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-battery-plugin/default.nix @@ -3,10 +3,10 @@ mkXfceDerivation { category = "panel-plugins"; pname = "xfce4-battery-plugin"; - version = "1.1.3"; - rev-prefix = ""; + version = "1.1.4"; + rev-prefix = "xfce4-battery-plugin-"; odd-unstable = false; - sha256 = "0ligdiasrfc3170kd7sif2ml6lvlpp11lbxz3xdvklqkv7p3323y"; + sha256 = "sha256-LwwlyWhtVM+OHR9KtE4DPyU5V/dMOjcgSjsI3o7qfk8="; buildInputs = [ gtk3 libxfce4ui libxfce4util xfce4-panel xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-clipman-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-clipman-plugin/default.nix index d4492948ac..7f18009c51 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-clipman-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-clipman-plugin/default.nix @@ -4,7 +4,7 @@ mkXfceDerivation { category = "panel-plugins"; pname = "xfce4-clipman-plugin"; version = "1.6.2"; - sha256 = "0pm4pzq3imc0m09mg0zk6kwcn5yzdgiqgdbpws01q3xz58jmb4a6"; + sha256 = "sha256-RpFVJSq/DxyA5ne1h+Nr3xfL+DTzg1cTqIDVOPC/pF4="; buildInputs = [ libXtst libxfce4ui xfce4-panel xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-cpufreq-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-cpufreq-plugin/default.nix index f776e6c169..358d2b64e4 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-cpufreq-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-cpufreq-plugin/default.nix @@ -4,7 +4,7 @@ mkXfceDerivation { category = "panel-plugins"; pname = "xfce4-cpufreq-plugin"; version = "1.2.5"; - sha256 = "1isqlfhz1ijl1h3hfvi0n4misdjsrhd7pc9h5rkaqm4vh543ggxg"; + sha256 = "sha256-r783SIGbVKxmLjCxexrMWjYdK7EgbgcHDFTG8KGjWMc="; buildInputs = [ gtk3 libxfce4ui libxfce4util xfce4-panel xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-cpugraph-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-cpugraph-plugin/default.nix index 991da9928f..1a8842f5c8 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-cpugraph-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-cpugraph-plugin/default.nix @@ -24,7 +24,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "13302psv0fzg2dsgadr8j6mb06k1bsa4zw6hxmb644vqlvcwq37v"; + sha256 = "sha256-+wzM2aZ4E2JW7dDwT5ReYRqwqpEoN/V0E+87sPUVYIw="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-datetime-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-datetime-plugin/default.nix index 44d255c5fa..2626ea7499 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-datetime-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-datetime-plugin/default.nix @@ -12,7 +12,7 @@ mkXfceDerivation { version = "0.8.1"; rev-prefix = "xfce4-datetime-plugin-"; - sha256 = "06h13bmh2sni4qbr3kfnqaa5dq5f48h4xkywrm9pa6h2nyvn4rma"; + sha256 = "sha256-qmZit7cCGnVTzdzPTiAiruBWlMLWzZEXJtFqAesaARo="; nativeBuildInputs = [ gettext @@ -26,6 +26,6 @@ mkXfceDerivation { meta = with lib; { description = "Shows the date and time in the panel, and a calendar appears when you left-click on it"; - maintainers = [ maintainers.AndersonTorres ]; + maintainers = [ ]; }; } diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-dockbarx-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-dockbarx-plugin/default.nix index 9224a22e53..41f71ec2f9 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-dockbarx-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-dockbarx-plugin/default.nix @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { owner = "xuzhen"; repo = "xfce4-dockbarx-plugin"; rev = rev; - sha256 = "0s8bljn4ga2hj480j0jwkc0npp8szbmirmcsys791gk32iq4dasn"; + sha256 = "sha256-VqtGcBRjvpCO9prVHOv6Gt1rAZtcAgkQkVCoR6ykC2k="; }; pythonPath = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-embed-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-embed-plugin/default.nix index 7c48e4a2a9..00738ccbc6 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-embed-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-embed-plugin/default.nix @@ -18,7 +18,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "0a72kqsjjh45swimqlpyrahdnplp0383v0i4phr4n6g8c1ixyry7"; + sha256 = "sha256-x2ffY2DoGUsyvCSCPdAAl17boMr+Ulwj14VAKTWe4ig="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-eyes-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-eyes-plugin/default.nix index d19f0051d4..4bc0399404 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-eyes-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-eyes-plugin/default.nix @@ -19,7 +19,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "1iaszzkagl1mb0cdafrvlfjnjklhhs9y90517par34sjiqbq1dsd"; + sha256 = "sha256-TbeAF45Sk5HVPaGA5JOGkE5ppaM7O9UYWDXQp+b/WsU="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-fsguard-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-fsguard-plugin/default.nix index 36cca7b739..1e98a5a621 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-fsguard-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-fsguard-plugin/default.nix @@ -19,7 +19,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "Z9jmohmnEXxZaTrbxZw5puujHj8YpUmRie9O8otVQQU="; + sha256 = "sha256-Z9jmohmnEXxZaTrbxZw5puujHj8YpUmRie9O8otVQQU="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-genmon-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-genmon-plugin/default.nix index 8289be3331..e190df90b8 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-genmon-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-genmon-plugin/default.nix @@ -18,7 +18,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "shGf0P8Z+ik7l+yXsN6OJBeZ4IuGIYUVFnxWi9m1ATU="; + sha256 = "sha256-shGf0P8Z+ik7l+yXsN6OJBeZ4IuGIYUVFnxWi9m1ATU="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-hardware-monitor-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-hardware-monitor-plugin/default.nix index 3a01e80638..8ff68c21d6 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-hardware-monitor-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-hardware-monitor-plugin/default.nix @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://git.xfce.org/archive/${pname}/snapshot/${pname}-${version}.tar.gz"; - sha256 = "11k7m41jxkaqmpp5njkixw60q517xnw923mz34dnm1llx9ilvfk8"; + sha256 = "sha256-aLpNY+qUhmobGb8OkbjtJxQMDO9xSlvurVjNLgOpZ4Y="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-mailwatch-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-mailwatch-plugin/default.nix index b9f4481be3..56d9a15aaa 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-mailwatch-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-mailwatch-plugin/default.nix @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "0bmykjhd3gs1737fl3zn5gg6f3vlncak2xqz89zv5018znz1xy90"; + sha256 = "sha256-IPkevv0ogLJ/Qh93MRWzdA9n3iv2D+rOOEG/0aCcvi4="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-mpc-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-mpc-plugin/default.nix index 37f64021c7..8012b14b13 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-mpc-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-mpc-plugin/default.nix @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "0q3pysdp85b3c7g3b59y3c69g4nw6bvbf518lnri4lxrnsvpizpf"; + sha256 = "sha256-7v54t7a5UxKzpSgUt/Yy3JKXDBs+lTXeYWMVdJv2d2A="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-namebar-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-namebar-plugin/default.nix index ec57a7260f..baba34212f 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-namebar-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-namebar-plugin/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, pkg-config, fetchFromGitHub, python3, vala_0_46 -, gtk3, libwnck3, libxfce4util, xfce4-panel, wafHook, xfce }: +, gtk3, libwnck, libxfce4util, xfce4-panel, wafHook, xfce }: stdenv.mkDerivation rec { pname = "xfce4-namebar-plugin"; @@ -9,11 +9,11 @@ stdenv.mkDerivation rec { owner = "HugLifeTiZ"; repo = pname; rev = "v${version}"; - sha256 = "0l70f6mzkscsj4wr43wp5c0l2qnf85vj24cv02bjrh3bzz6wkak8"; + sha256 = "sha256-aKrJzf9rwCyXAJsRIXdBzmJBASuXD5I5kZrp+atx4FA="; }; nativeBuildInputs = [ pkg-config vala_0_46 wafHook python3 ]; - buildInputs = [ gtk3 libwnck3 libxfce4util xfce4-panel ]; + buildInputs = [ gtk3 libwnck libxfce4util xfce4-panel ]; postPatch = '' substituteInPlace src/namebar.vala --replace 'var dirs = Environment.get_system_data_dirs()' "string[] dirs = { \"$out/share\" }" diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-netload-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-netload-plugin/default.nix index 4ee50a07a3..dc39001b80 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-netload-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-netload-plugin/default.nix @@ -3,10 +3,10 @@ mkXfceDerivation { category = "panel-plugins"; pname = "xfce4-netload-plugin"; - version = "1.3.2"; - rev-prefix = "version-"; + version = "1.4.0"; + rev-prefix = "xfce4-netload-plugin-"; odd-unstable = false; - sha256 = "1py1l4z5ah4nlq8l2912k47ffsa5z7p1gbvlk7nw6b9r1x4ykdfl"; + sha256 = "sha256-HasaMymMCPidYkaAUK4gvD+Ka7NJdFOTeq43gJ1G3jo="; buildInputs = [ gtk3 libxfce4ui libxfce4util xfce4-panel xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-notes-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-notes-plugin/default.nix index 79519b8587..6e84c83eaf 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-notes-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-notes-plugin/default.nix @@ -17,7 +17,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "E/kJyUi2Oflt5kz3k+t0yxd5WJIB05M+/yFO6PNasIg="; + sha256 = "sha256-E/kJyUi2Oflt5kz3k+t0yxd5WJIB05M+/yFO6PNasIg="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-pulseaudio-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-pulseaudio-plugin/default.nix index 10850974bb..ab39837216 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-pulseaudio-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-pulseaudio-plugin/default.nix @@ -18,7 +18,7 @@ mkXfceDerivation { category = "panel-plugins"; pname = "xfce4-pulseaudio-plugin"; version = "0.4.3"; - sha256 = "1rfw2w8gl95iawiy57qlvz958dqjc8bmxnc3dma4rqzm6g46jkgq"; + sha256 = "sha256-+E1pyDP140xUbYPZXhdiEjdU0t8Un+IjV7Ek+hAX3OU="; nativeBuildInputs = [ automakeAddFlags diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-sensors-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-sensors-plugin/default.nix index dbefda4e5e..2e275f2b35 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-sensors-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-sensors-plugin/default.nix @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "0v44qwrwb95jrlsni1gdlc0zhymlm62w42zs3jbr5mcdc7j4mil3"; + sha256 = "sha256-g8ZK5GGN1ZKXHPoLwoWptHr4AaPthWg1zbKkxTPHhGw="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-systemload-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-systemload-plugin/default.nix index 3c35297897..092985f5ac 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-systemload-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-systemload-plugin/default.nix @@ -17,7 +17,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "0lknh5l30qs5c69wwjcblbyhczvdbxs59fqkb8mpqbfm05w01lan"; + sha256 = "sha256-VtEAeAHVLXwrWhO7VHRfbX8G/aKLSc6TYUVjMGiBdlI="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-timer-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-timer-plugin/default.nix index 3731d3937b..a31824ab77 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-timer-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-timer-plugin/default.nix @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "1qr4m3n2l3rvsizsr3h7fyfajszfalqm7rhvjx2yjj8r3f8x4ljb"; + sha256 = "sha256-S1LSkRsZSelFlxvmUzFV7mupnHcHjqx/1DsPKuyoJOM="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-verve-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-verve-plugin/default.nix index 209e25bc9e..838dba46c8 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-verve-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-verve-plugin/default.nix @@ -12,7 +12,7 @@ mkXfceDerivation { pname = "xfce4-verve-plugin"; version = "2.0.1"; rev-prefix = ""; - sha256 = "YwUOSTZMoHsWWmi/ajQv/fX8a0IJoc3re3laVEmnX/M="; + sha256 = "sha256-YwUOSTZMoHsWWmi/ajQv/fX8a0IJoc3re3laVEmnX/M="; buildInputs = [ gtk3 libxfce4ui pcre libxfce4util xfce4-panel ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-weather-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-weather-plugin/default.nix index 5992bf343e..d300329d28 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-weather-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-weather-plugin/default.nix @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://xfce/src/${category}/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.bz2"; - sha256 = "1z2k24d599mxf5gqa35i3xmc3gk2yvqs80hxxpyw06yma6ljw973"; + sha256 = "sha256-4yQuqVHVG8D97R0CpPH2Yr7Bah+xDIVfcb2mVBoRU/w="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-whiskermenu-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-whiskermenu-plugin/default.nix index 123376b0f2..b9d6f5b23e 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-whiskermenu-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-whiskermenu-plugin/default.nix @@ -6,7 +6,7 @@ mkXfceDerivation { version = "2.5.3"; rev-prefix = "v"; odd-unstable = false; - sha256 = "15kcph35pji3l1y81snrmpqzhhpdc9h4nk6cjsjyla51a1s2y3hz"; + sha256 = "sha256-Hw4vdFChKOqllsxMS2Bi7UL48a3Z6oB8oCPKWwa8bJY="; nativeBuildInputs = [ cmake ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-windowck-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-windowck-plugin/default.nix index 281003db92..8f4751b173 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-windowck-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-windowck-plugin/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, pkg-config, intltool, python3, imagemagick, libwnck3, libxfce4ui, xfce4-panel, xfconf, xfce4-dev-tools, xfce }: +{ lib, stdenv, fetchFromGitHub, pkg-config, intltool, python3, imagemagick, libwnck, libxfce4ui, xfce4-panel, xfconf, xfce4-dev-tools, xfce }: stdenv.mkDerivation rec { pname = "xfce4-windowck-plugin"; @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { owner = "invidian"; repo = pname; rev = "v${version}"; - sha256 = "0l066a174v2c7ly125v9x1fgbg5bnpwdwnjh69v9kp4plp791q4n"; + sha256 = "sha256-luCQzqWX3Jl2MlBa3vi1q7z1XOhpFxE8PUxscoIyBlA="; }; nativeBuildInputs = [ @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { buildInputs = [ python3 imagemagick - libwnck3 + libwnck libxfce4ui xfce4-panel xfconf diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-xkb-plugin/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-xkb-plugin/default.nix index 35bc5ea828..8145f1a2af 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-xkb-plugin/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/panel-plugins/xfce4-xkb-plugin/default.nix @@ -2,7 +2,7 @@ , mkXfceDerivation , gtk3 , librsvg -, libwnck3 +, libwnck , libxklavier , garcon , libxfce4ui @@ -16,7 +16,7 @@ mkXfceDerivation { pname = "xfce4-xkb-plugin"; version = "0.8.2"; rev-prefix = ""; - sha256 = "xmCoNMxykeaThYEJo6BcbraFo9CruFZL6YPjovzb6hg="; + sha256 = "sha256-xmCoNMxykeaThYEJo6BcbraFo9CruFZL6YPjovzb6hg="; buildInputs = [ garcon @@ -25,7 +25,7 @@ mkXfceDerivation { libxfce4ui libxfce4util libxklavier - libwnck3 + libwnck xfce4-panel xfconf ]; diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/archive/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/archive/default.nix index c46b5a0fd1..53d18b4d9b 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/archive/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/archive/default.nix @@ -13,7 +13,7 @@ mkXfceDerivation { pname = "thunar-archive-plugin"; version = "0.4.0"; - sha256 = "1793zicm00fail4iknliwy2b668j239ndxhc9hy6jarvdyp08h38"; + sha256 = "sha256-aEAErm87K2k8TAz2ZtMQEhmzhOeR2hkJjcoBUFn8I50="; nativeBuildInputs = [ intltool diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/dropbox/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/dropbox/default.nix index d43c56c728..3e8004d3d5 100644 --- a/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/dropbox/default.nix +++ b/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/dropbox/default.nix @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { owner = "Jeinzi"; repo = "thunar-dropbox"; rev = version; - sha256 = "1fshjvh542ffa8npfxv3cassgn6jclb2ix9ir997y4k0abzp1fxb"; + sha256 = "sha256-q7tw/1JgEn9SyjH1KBZl0tintWJjd3ctUs4JUuCWULs="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/media-tags/default.nix b/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/media-tags/default.nix new file mode 100644 index 0000000000..0ae0c35233 --- /dev/null +++ b/third_party/nixpkgs/pkgs/desktops/xfce/thunar-plugins/media-tags/default.nix @@ -0,0 +1,36 @@ +{ lib +, mkXfceDerivation +, gtk3 +, thunar +, exo +, libxfce4util +, intltool +, gettext +, taglib +}: + +mkXfceDerivation { + category = "thunar-plugins"; + pname = "thunar-media-tags-plugin"; + version = "0.3.0"; + + sha256 = "sha256-jtgcHH5U5GOvzDVUwPEreMtTdk5DT6sXvFPDbzbF684="; + + nativeBuildInputs = [ + intltool + gettext + ]; + + buildInputs = [ + thunar + exo + gtk3 + libxfce4util + taglib + ]; + + meta = with lib; { + description = "Thunar plugin providing tagging and renaming features for media files"; + maintainers = with maintainers; [ ncfavier ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/beam-modules/build-mix.nix b/third_party/nixpkgs/pkgs/development/beam-modules/build-mix.nix index 4da627a844..728d249c97 100644 --- a/third_party/nixpkgs/pkgs/development/beam-modules/build-mix.nix +++ b/third_party/nixpkgs/pkgs/development/beam-modules/build-mix.nix @@ -4,6 +4,7 @@ , version , src , buildInputs ? [ ] +, nativeBuildInputs ? [ ] , beamDeps ? [ ] , propagatedBuildInputs ? [ ] , postPatch ? "" @@ -23,16 +24,12 @@ let pkg = self: stdenv.mkDerivation (attrs // { name = "${name}-${version}"; - inherit version; - inherit src; + inherit version src; MIX_ENV = mixEnv; MIX_DEBUG = if enableDebugInfo then 1 else 0; HEX_OFFLINE = 1; - # stripping does not have any effect on beam files - dontStrip = true; - # add to ERL_LIBS so other modules can find at runtime. # http://erlang.org/doc/man/code.html#code-path # Mix also searches the code path when compiling with the --no-deps-check flag @@ -41,7 +38,8 @@ let addToSearchPath ERL_LIBS "$1/lib/erlang/lib" ''; - buildInputs = buildInputs ++ [ elixir hex ]; + buildInputs = buildInputs ++ [ ]; + nativeBuildInputs = nativeBuildInputs ++ [ elixir hex ]; propagatedBuildInputs = propagatedBuildInputs ++ beamDeps; buildPhase = attrs.buildPhase or '' @@ -73,6 +71,10 @@ let runHook postInstall ''; + # stripping does not have any effect on beam files + # it is however needed for dependencies with NIFs like bcrypt for example + dontStrip = false; + passthru = { packageName = name; env = shell self; diff --git a/third_party/nixpkgs/pkgs/development/beam-modules/build-rebar3.nix b/third_party/nixpkgs/pkgs/development/beam-modules/build-rebar3.nix index b66dc535ce..0dfd68f099 100644 --- a/third_party/nixpkgs/pkgs/development/beam-modules/build-rebar3.nix +++ b/third_party/nixpkgs/pkgs/development/beam-modules/build-rebar3.nix @@ -42,9 +42,13 @@ let buildInputs = buildInputs ++ [ erlang rebar3 openssl libyaml ]; propagatedBuildInputs = unique beamDeps; - dontStrip = true; inherit src; + # stripping does not have any effect on beam files + # it is however needed for dependencies with NIFs + # false is the default but we keep this for readability + dontStrip = false; + setupHook = writeText "setupHook.sh" '' addToSearchPath ERL_LIBS "$1/lib/erlang/lib/" ''; diff --git a/third_party/nixpkgs/pkgs/development/beam-modules/default.nix b/third_party/nixpkgs/pkgs/development/beam-modules/default.nix index 0c184e0ba7..6c33298ff9 100644 --- a/third_party/nixpkgs/pkgs/development/beam-modules/default.nix +++ b/third_party/nixpkgs/pkgs/development/beam-modules/default.nix @@ -21,8 +21,8 @@ let inherit (callPackage ../tools/build-managers/rebar3 { }) rebar3 rebar3WithPlugins; rebar = callPackage ../tools/build-managers/rebar { }; - # rebar3 port compiler plugin is required by buildRebar3 pc = callPackage ./pc { }; + rebar3-proper = callPackage ./rebar3-proper { }; rebar3-nix = callPackage ./rebar3-nix { }; fetchHex = callPackage ./fetch-hex.nix { }; diff --git a/third_party/nixpkgs/pkgs/development/beam-modules/erlang-ls/default.nix b/third_party/nixpkgs/pkgs/development/beam-modules/erlang-ls/default.nix index e6f3e7fb9e..4e9461dc74 100644 --- a/third_party/nixpkgs/pkgs/development/beam-modules/erlang-ls/default.nix +++ b/third_party/nixpkgs/pkgs/development/beam-modules/erlang-ls/default.nix @@ -1,23 +1,37 @@ -{ fetchFromGitHub, fetchHex, rebar3Relx, buildRebar3, lib }: +{ fetchFromGitHub, fetchHex, rebar3Relx, buildRebar3, rebar3-proper, lib }: let - version = "0.16.0"; + version = "0.17.0"; owner = "erlang-ls"; repo = "erlang_ls"; deps = import ./rebar-deps.nix { inherit fetchHex fetchFromGitHub; builder = buildRebar3; + overrides = (self: super: { + proper = super.proper.overrideAttrs (_: { + configurePhase = "true"; + }); + }); }; in rebar3Relx { name = "erlang-ls"; inherit version; src = fetchFromGitHub { inherit owner repo; - sha256 = "0l09yhj3rsb9zj4cs6a1bcfmi6zbyb3xk1lv494xbyiv5d61vkwm"; + sha256 = "0szg9hx436cvy80sh94dzmf2rainnw3fjc84bv3hlzjwwzmxj9aw"; rev = version; }; releaseType = "escript"; beamDeps = builtins.attrValues deps; + buildPlugins = [ rebar3-proper ]; buildPhase = "HOME=. make"; + # based on https://github.com/erlang-ls/erlang_ls/blob/main/.github/workflows/build.yml + # these tests are excessively long and we should probably skip them + checkPhase = '' + HOME=. epmd -daemon + HOME=. rebar3 ct + HOME=. rebar3 proper --constraint_tries 100 + ''; + doCheck = true; installPhase = '' mkdir -p $out/bin cp _build/default/bin/erlang_ls $out/bin/ diff --git a/third_party/nixpkgs/pkgs/development/beam-modules/erlang-ls/rebar-deps.nix b/third_party/nixpkgs/pkgs/development/beam-modules/erlang-ls/rebar-deps.nix index 12cbb182ce..5d55ce0c52 100644 --- a/third_party/nixpkgs/pkgs/development/beam-modules/erlang-ls/rebar-deps.nix +++ b/third_party/nixpkgs/pkgs/development/beam-modules/erlang-ls/rebar-deps.nix @@ -1,175 +1,219 @@ # Generated by rebar3_nix let fetchOnly = { src, ... }: src; -in { builder ? fetchOnly, fetchHex, fetchFromGitHub }: rec { - getopt = builder { - name = "getopt"; - version = "1.0.1"; - src = fetchHex { - pkg = "getopt"; +in { builder ? fetchOnly, fetchHex, fetchFromGitHub, overrides ? (x: y: { }) }: +let + self = packages // (overrides self packages); + packages = with self; { + getopt = builder { + name = "getopt"; version = "1.0.1"; - sha256 = "sha256-U+Grg7nOtlyWctPno1uAkum9ybPugHIUcaFhwQxZlZw="; + src = fetchHex { + pkg = "getopt"; + version = "1.0.1"; + sha256 = "sha256-U+Grg7nOtlyWctPno1uAkum9ybPugHIUcaFhwQxZlZw="; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - zipper = builder { - name = "zipper"; - version = "1.0.1"; - src = fetchHex { - pkg = "zipper"; + zipper = builder { + name = "zipper"; version = "1.0.1"; - sha256 = "sha256-ah/T4fDMHR31ZCyaDOIXgDZBGwpclkKFHR2idr1zfC0="; + src = fetchHex { + pkg = "zipper"; + version = "1.0.1"; + sha256 = "sha256-ah/T4fDMHR31ZCyaDOIXgDZBGwpclkKFHR2idr1zfC0="; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - quickrand = builder { - name = "quickrand"; - version = "2.0.1"; - src = fetchHex { - pkg = "quickrand"; + quickrand = builder { + name = "quickrand"; version = "2.0.1"; - sha256 = "sha256-FNtn1K72uIFYEOyfPM714yS3O1bK42h/mddSuFvdTJY="; + src = fetchHex { + pkg = "quickrand"; + version = "2.0.1"; + sha256 = "sha256-FNtn1K72uIFYEOyfPM714yS3O1bK42h/mddSuFvdTJY="; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - providers = builder { - name = "providers"; - version = "1.8.1"; - src = fetchHex { - pkg = "providers"; + providers = builder { + name = "providers"; version = "1.8.1"; - sha256 = "sha256-5FdFrenEdqmkaeoIQOQYqxk2DcRPAaIzME4RikRIa6A="; + src = fetchHex { + pkg = "providers"; + version = "1.8.1"; + sha256 = "sha256-5FdFrenEdqmkaeoIQOQYqxk2DcRPAaIzME4RikRIa6A="; + }; + beamDeps = [ getopt ]; }; - beamDeps = [ getopt ]; - }; - katana_code = builder { - name = "katana_code"; - version = "0.2.1"; - src = fetchHex { - pkg = "katana_code"; + katana_code = builder { + name = "katana_code"; version = "0.2.1"; - sha256 = "sha256-hEitP1bZgU+YoovmUPcZG91QZXXjRcwW1YZmCxD26ZI="; + src = fetchHex { + pkg = "katana_code"; + version = "0.2.1"; + sha256 = "sha256-hEitP1bZgU+YoovmUPcZG91QZXXjRcwW1YZmCxD26ZI="; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - bucs = builder { - name = "bucs"; - version = "1.0.16"; - src = fetchHex { - pkg = "bucs"; + bucs = builder { + name = "bucs"; version = "1.0.16"; - sha256 = "sha256-/2pccqUArXrsHuO6FkrjxFDq3uiYsNFR4frKGKyNDWI="; + src = fetchHex { + pkg = "bucs"; + version = "1.0.16"; + sha256 = "sha256-/2pccqUArXrsHuO6FkrjxFDq3uiYsNFR4frKGKyNDWI="; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - yamerl = builder { - name = "yamerl"; - version = "0.8.1"; - src = fetchHex { - pkg = "yamerl"; + yamerl = builder { + name = "yamerl"; version = "0.8.1"; - sha256 = "sha256-lssw+dZDRP7Q74qS6fFvIH3mwE3/9PNmdSynn1vOsj8="; + src = fetchHex { + pkg = "yamerl"; + version = "0.8.1"; + sha256 = "sha256-lssw+dZDRP7Q74qS6fFvIH3mwE3/9PNmdSynn1vOsj8="; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - uuid = builder { - name = "uuid"; - version = "2.0.1"; - src = fetchHex { - pkg = "uuid_erl"; + uuid = builder { + name = "uuid"; version = "2.0.1"; - sha256 = "sha256-q1fKzNUfFwAR5fREzoZfhLQWBeSDqe/MRowa+uyHVTs="; + src = fetchHex { + pkg = "uuid_erl"; + version = "2.0.1"; + sha256 = "sha256-q1fKzNUfFwAR5fREzoZfhLQWBeSDqe/MRowa+uyHVTs="; + }; + beamDeps = [ quickrand ]; }; - beamDeps = [ quickrand ]; - }; - tdiff = builder { - name = "tdiff"; - version = "0.1.2"; - src = fetchHex { - pkg = "tdiff"; + tdiff = builder { + name = "tdiff"; version = "0.1.2"; - sha256 = "sha256-4MLhaPmSUqWIl2jVyPHmUQoYRZLUz6BrIneKGNM9eHU="; + src = fetchHex { + pkg = "tdiff"; + version = "0.1.2"; + sha256 = "sha256-4MLhaPmSUqWIl2jVyPHmUQoYRZLUz6BrIneKGNM9eHU="; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - redbug = builder { - name = "redbug"; - version = "2.0.6"; - src = fetchHex { - pkg = "redbug"; + redbug = builder { + name = "redbug"; version = "2.0.6"; - sha256 = "sha256-qtlJhnH0q5HqylCZ/oWmFhgVimNuYoaJLE989K8XHQQ="; + src = fetchHex { + pkg = "redbug"; + version = "2.0.6"; + sha256 = "sha256-qtlJhnH0q5HqylCZ/oWmFhgVimNuYoaJLE989K8XHQQ="; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - rebar3_format = builder { - name = "rebar3_format"; - version = "0.8.2"; - src = fetchHex { - pkg = "rebar3_format"; + rebar3_format = builder { + name = "rebar3_format"; version = "0.8.2"; - sha256 = "sha256-yo/ydjjCFpWT0USdrL6IlWNBk+0zNOkGtU/JfwgfUhM="; + src = fetchHex { + pkg = "rebar3_format"; + version = "0.8.2"; + sha256 = "sha256-yo/ydjjCFpWT0USdrL6IlWNBk+0zNOkGtU/JfwgfUhM="; + }; + beamDeps = [ katana_code ]; }; - beamDeps = [ katana_code ]; - }; - ranch = builder { - name = "ranch"; - version = "2.0.0"; - src = fetchHex { - pkg = "ranch"; + ranch = builder { + name = "ranch"; version = "2.0.0"; - sha256 = "sha256-wgpIQMfWYjwZgS06fIKLLxvRU+8PEky2nFT+UdikKuA="; + src = fetchHex { + pkg = "ranch"; + version = "2.0.0"; + sha256 = "sha256-wgpIQMfWYjwZgS06fIKLLxvRU+8PEky2nFT+UdikKuA="; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - jsx = builder { - name = "jsx"; - version = "3.0.0"; - src = fetchHex { - pkg = "jsx"; + jsx = builder { + name = "jsx"; version = "3.0.0"; - sha256 = "sha256-N77KBDX1yoovRfdqRiEedkGPvvgMNvA2HCSfx1BZ3G0="; + src = fetchHex { + pkg = "jsx"; + version = "3.0.0"; + sha256 = "sha256-N77KBDX1yoovRfdqRiEedkGPvvgMNvA2HCSfx1BZ3G0="; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - erlfmt = builder { - name = "erlfmt"; - version = "git"; - src = fetchFromGitHub { - owner = "whatsapp"; - repo = "erlfmt"; - rev = "2e93fc4a646111357642b0179a2a63151868d890"; - sha256 = "0n7kygycn05aqdp5dyj192mja89l4nxv2wg16qg2c0bmw9s7j2mr"; + erlfmt = builder { + name = "erlfmt"; + version = "git"; + src = fetchFromGitHub { + owner = "whatsapp"; + repo = "erlfmt"; + rev = "2e93fc4a646111357642b0179a2a63151868d890"; + sha256 = "0n7kygycn05aqdp5dyj192mja89l4nxv2wg16qg2c0bmw9s7j2mr"; + }; + beamDeps = [ ]; }; - beamDeps = [ ]; - }; - ephemeral = builder { - name = "ephemeral"; - version = "2.0.4"; - src = fetchHex { - pkg = "ephemeral"; + ephemeral = builder { + name = "ephemeral"; version = "2.0.4"; - sha256 = "sha256-Syk9gPdfnEV1/0ucjoiaVoAvQLAYv1fnTxlkTv7myFA="; + src = fetchHex { + pkg = "ephemeral"; + version = "2.0.4"; + sha256 = "sha256-Syk9gPdfnEV1/0ucjoiaVoAvQLAYv1fnTxlkTv7myFA="; + }; + beamDeps = [ bucs ]; }; - beamDeps = [ bucs ]; - }; - elvis_core = builder { - name = "elvis_core"; - version = "1.1.1"; - src = fetchHex { - pkg = "elvis_core"; + elvis_core = builder { + name = "elvis_core"; version = "1.1.1"; - sha256 = "sha256-ORyVuqSfJxjX+0mLzwgEbd/CAs8Kq2Oy5DknFIXJ3EI="; + src = fetchHex { + pkg = "elvis_core"; + version = "1.1.1"; + sha256 = "sha256-ORyVuqSfJxjX+0mLzwgEbd/CAs8Kq2Oy5DknFIXJ3EI="; + }; + beamDeps = [ katana_code zipper ]; }; - beamDeps = [ katana_code zipper ]; - }; - docsh = builder { - name = "docsh"; - version = "0.7.2"; - src = fetchHex { - pkg = "docsh"; + docsh = builder { + name = "docsh"; version = "0.7.2"; - sha256 = "sha256-Tn20YbsHVA0rw9NmuFE/AZdxLQSVu4V0TzZ9OBUHYTQ="; + src = fetchHex { + pkg = "docsh"; + version = "0.7.2"; + sha256 = "sha256-Tn20YbsHVA0rw9NmuFE/AZdxLQSVu4V0TzZ9OBUHYTQ="; + }; + beamDeps = [ providers ]; + }; + proper_contrib = builder { + name = "proper_contrib"; + version = "0.2.0"; + src = fetchHex { + pkg = "proper_contrib"; + version = "0.2.0"; + sha256 = "sha256-jFRRL1zr9JKaG1eqMDfcKk2xe93uOrXUenB14icVCBU="; + }; + beamDeps = [ proper ]; + }; + proper = builder { + name = "proper"; + version = "1.3.0"; + src = fetchHex { + pkg = "proper"; + version = "1.3.0"; + sha256 = "sha256-SqGS/M3dA/2+UP72IL6dTS+SY1tU9V+4OuwYWZRAPLw="; + }; + beamDeps = [ ]; + }; + meck = builder { + name = "meck"; + version = "0.9.0"; + src = fetchHex { + pkg = "meck"; + version = "0.9.0"; + sha256 = "sha256-+BPpDdC4myUWoCAaNV6EsavHi1dRqgy/ZpqdhagQrGM="; + }; + beamDeps = [ ]; + }; + coveralls = builder { + name = "coveralls"; + version = "2.2.0"; + src = fetchHex { + pkg = "coveralls"; + version = "2.2.0"; + sha256 = "sha256-zVTbCqjGS1OSgBicVhns7hOkaiiw8ct3RUTdzBZiBKM="; + }; + beamDeps = [ jsx ]; }; - beamDeps = [ providers ]; }; -} +in self diff --git a/third_party/nixpkgs/pkgs/development/beam-modules/mix-release.nix b/third_party/nixpkgs/pkgs/development/beam-modules/mix-release.nix index 774af2e5ec..80e8721302 100644 --- a/third_party/nixpkgs/pkgs/development/beam-modules/mix-release.nix +++ b/third_party/nixpkgs/pkgs/development/beam-modules/mix-release.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, elixir, erlang, findutils, hex, rebar, rebar3, fetchMixDeps, makeWrapper, git }: +{ stdenv, lib, elixir, erlang, findutils, hex, rebar, rebar3, fetchMixDeps, makeWrapper, git, ripgrep }: { pname , version @@ -23,7 +23,8 @@ let in assert mixNixDeps != { } -> mixFodDeps == null; stdenv.mkDerivation (overridable // { - nativeBuildInputs = nativeBuildInputs ++ [ erlang hex elixir makeWrapper git ]; + # rg is used as a better grep to search for erlang references in the final release + nativeBuildInputs = nativeBuildInputs ++ [ erlang hex elixir makeWrapper git ripgrep ]; buildInputs = builtins.attrValues mixNixDeps; MIX_ENV = mixEnv; @@ -31,6 +32,7 @@ stdenv.mkDerivation (overridable // { HEX_OFFLINE = 1; DEBUG = if enableDebugInfo then 1 else 0; # for Rebar3 compilation # the api with `mix local.rebar rebar path` makes a copy of the binary + # some older dependencies still use rebar MIX_REBAR = "${rebar}/bin/rebar"; MIX_REBAR3 = "${rebar3}/bin/rebar3"; @@ -82,8 +84,10 @@ stdenv.mkDerivation (overridable // { runHook postInstall ''; - fixupPhase = '' - runHook preFixup + # Stripping of the binary is intentional + # even though it does not affect beam files + # it is necessary for NIFs binaries + postFixup = '' if [ -e "$out/bin/${pname}.bat" ]; then # absent in special cases, i.e. elixir-ls rm "$out/bin/${pname}.bat" # windows file fi @@ -94,21 +98,20 @@ stdenv.mkDerivation (overridable // { if [ -e $out/releases/COOKIE ]; then # absent in special cases, i.e. elixir-ls rm $out/releases/COOKIE fi - # TODO remove the uneeded reference too erlang - # one possible way would be - # for f in $(${findutils}/bin/find $out -name start); do - # substituteInPlace $f \ - # --replace 'ROOTDIR=${erlang}/lib/erlang' 'ROOTDIR=""' - # done - # What is left to do is to check that erlang is not required on - # the host - - patchShebangs $out - runHook postFixup + # removing unused erlang reference from resulting derivation to reduce + # closure size + if [ -e $out/erts-* ]; then + echo "ERTS found in $out - removing references to erlang to reduce closure size" + # there is a link in $out/erts-*/bin/start always + # sometimes there are links in dependencies like bcrypt compiled binaries + for file in $(rg "${erlang}/lib/erlang" "$out" --text --files-with-matches); do + substituteInPlace "$file" --replace "${erlang}/lib/erlang" "$out" + done + fi ''; - # TODO figure out how to do a Fixed Output Derivation and add the output hash - # This doesn't play well at the moment with Phoenix projects - # for example that have frontend dependencies + # TODO investigate why the resulting closure still has + # a reference to erlang. + # uncommenting the following will fail the build # disallowedReferences = [ erlang ]; }) diff --git a/third_party/nixpkgs/pkgs/development/beam-modules/rebar3-proper/default.nix b/third_party/nixpkgs/pkgs/development/beam-modules/rebar3-proper/default.nix new file mode 100644 index 0000000000..2955beeeb5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/beam-modules/rebar3-proper/default.nix @@ -0,0 +1,13 @@ +{ lib, buildHex }: + +buildHex { + name = "rebar3_proper"; + version = "0.12.1"; + sha256 = "1f174fb6h2071wr7qbw9aqqvnglzsjlylmyi8215fhrmi38w94b6"; + + meta = { + description = "rebar3 proper plugin"; + license = lib.licenses.bsd3; + homepage = "https://github.com/ferd/rebar3_proper"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/beam-modules/rebar3-release.nix b/third_party/nixpkgs/pkgs/development/beam-modules/rebar3-release.nix index d2c9da6414..98d10cb87c 100644 --- a/third_party/nixpkgs/pkgs/development/beam-modules/rebar3-release.nix +++ b/third_party/nixpkgs/pkgs/development/beam-modules/rebar3-release.nix @@ -46,24 +46,17 @@ let buildInputs = buildInputs ++ [ erlang rebar3 openssl ] ++ beamDeps; - dontStrip = true; + # ensure we strip any native binaries (eg. NIFs, ports) + stripDebugList = lib.optional (releaseType == "release") "rel"; inherit src; + REBAR_IGNORE_DEPS = beamDeps != [ ]; + configurePhase = '' runHook preConfigure ${lib.optionalString (checkouts != null) "cp --no-preserve=all -R ${checkouts}/_checkouts ."} - ${# Prevent rebar3 from trying to manage deps - lib.optionalString (beamDeps != [ ]) '' - erl -noshell -eval ' - {ok, Terms0} = file:consult("rebar.config"), - Terms = lists:keydelete(deps, 1, Terms0), - ok = file:write_file("rebar.config", [io_lib:format("~tp.~n", [T]) || T <- Terms]), - init:stop(0) - ' - rm -f rebar.lock - ''} runHook postConfigure ''; diff --git a/third_party/nixpkgs/pkgs/development/compilers/acme/default.nix b/third_party/nixpkgs/pkgs/development/compilers/acme/default.nix index f8731f5547..cebcbf3b2f 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/acme/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/acme/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { pname = "acme"; - version = "unstable-2020-12-27"; + version = "unstable-2021-02-14"; src = fetchsvn { url = "svn://svn.code.sf.net/p/acme-crossass/code-0/trunk"; - rev = "314"; - sha256 = "08zg26rh19nlif7id91nv0syx5n243ssxhfw0nk2r2bhjm5jrjz1"; + rev = "319"; + sha256 = "sha256-VifIQ+UEVMKJ+cNS+Xxusazinr5Cgu1lmGuhqj/5Mpk="; }; sourceRoot = "code-0-r${src.rev}/src"; diff --git a/third_party/nixpkgs/pkgs/development/compilers/adoptopenjdk-bin/jdk-linux-base.nix b/third_party/nixpkgs/pkgs/development/compilers/adoptopenjdk-bin/jdk-linux-base.nix index e304f67bd7..f61d925036 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/adoptopenjdk-bin/jdk-linux-base.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/adoptopenjdk-bin/jdk-linux-base.nix @@ -7,7 +7,7 @@ , makeWrapper , setJavaClassPath # minimum dependencies -, alsaLib +, alsa-lib , fontconfig , freetype , libffi @@ -44,7 +44,7 @@ let result = stdenv.mkDerivation rec { }; buildInputs = [ - alsaLib # libasound.so wanted by lib/libjsound.so + alsa-lib # libasound.so wanted by lib/libjsound.so fontconfig freetype stdenv.cc.cc.lib # libstdc++.so.6 diff --git a/third_party/nixpkgs/pkgs/development/compilers/armips/default.nix b/third_party/nixpkgs/pkgs/development/compilers/armips/default.nix new file mode 100644 index 0000000000..b6fbb5ef34 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/armips/default.nix @@ -0,0 +1,31 @@ +{ stdenv, lib, fetchFromGitHub, cmake }: + +stdenv.mkDerivation rec { + pname = "armips"; + version = "0.11.0"; + + src = fetchFromGitHub { + owner = "Kingcom"; + repo = "armips"; + rev = "v${version}"; + sha256 = "sha256-L+Uxww/WtvDJn1xZqoqA6Pkzq/98sy1qTxZbv6eEjbA="; + }; + + nativeBuildInputs = [ cmake ]; + + installPhase = '' + runHook preInstall + + mkdir -p $out/bin + cp armips $out/bin + + runHook postInstall + ''; + + meta = with lib; { + homepage = "https://github.com/Kingcom/armips"; + description = "Assembler for various ARM and MIPS platforms."; + license = licenses.mit; + maintainers = with maintainers; [ marius851000 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/compilers/cc65/default.nix b/third_party/nixpkgs/pkgs/development/compilers/cc65/default.nix index 03325d2fd6..cb2410ba06 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/cc65/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/cc65/default.nix @@ -1,8 +1,6 @@ -{ lib, stdenv -, fetchFromGitHub -}: +{ lib, gccStdenv, fetchFromGitHub }: -stdenv.mkDerivation rec { +gccStdenv.mkDerivation rec { pname = "cc65"; version = "2.19"; @@ -13,10 +11,9 @@ stdenv.mkDerivation rec { sha256 = "01a15yvs455qp20hri2pbg2wqvcip0d50kb7dibi9427hqk9cnj4"; }; - makeFlags = [ - "PREFIX=${placeholder "out"}" - "CC=${stdenv.cc.targetPrefix}cc" - ]; + makeFlags = [ "PREFIX=${placeholder "out"}" ]; + + enableParallelBuilding = true; meta = with lib; { homepage = "https://cc65.github.io/"; @@ -56,6 +53,6 @@ stdenv.mkDerivation rec { ''; license = licenses.zlib; maintainers = with maintainers; [ AndersonTorres ]; - platforms = with platforms; unix; + platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/chicken/5/chicken.nix b/third_party/nixpkgs/pkgs/development/compilers/chicken/5/chicken.nix index 9f2554b734..eb2ec5cbe3 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/chicken/5/chicken.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/chicken/5/chicken.nix @@ -1,7 +1,6 @@ { lib, stdenv, fetchurl, makeWrapper, darwin, bootstrap-chicken ? null }: let - version = "5.2.0"; platform = with stdenv; if isDarwin then "macosx" else if isCygwin then "cygwin" @@ -9,9 +8,9 @@ let else if isSunOS then "solaris" else "linux"; # Should be a sane default in -stdenv.mkDerivation { +stdenv.mkDerivation rec { pname = "chicken"; - inherit version; + version = "5.2.0"; binaryVersion = 11; @@ -46,13 +45,17 @@ stdenv.mkDerivation { done ''; - # TODO: Assert csi -R files -p '(pathname-file (repository-path))' == binaryVersion + doCheck = true; + postCheck = '' + ./csi -R chicken.pathname -R chicken.platform \ + -p "(assert (equal? \"${toString binaryVersion}\" (pathname-file (car (repository-path)))))" + ''; meta = { - homepage = "http://www.call-cc.org/"; + homepage = "https://call-cc.org/"; license = lib.licenses.bsd3; maintainers = with lib.maintainers; [ corngood ]; - platforms = lib.platforms.linux ++ lib.platforms.darwin; # Maybe other Unix + platforms = lib.platforms.unix; description = "A portable compiler for the Scheme programming language"; longDescription = '' CHICKEN is a compiler for the Scheme programming language. diff --git a/third_party/nixpkgs/pkgs/development/compilers/compcert/default.nix b/third_party/nixpkgs/pkgs/development/compilers/compcert/default.nix deleted file mode 100644 index beafd6414f..0000000000 --- a/third_party/nixpkgs/pkgs/development/compilers/compcert/default.nix +++ /dev/null @@ -1,125 +0,0 @@ -{ lib, stdenv, fetchFromGitHub, fetchpatch, makeWrapper -, coqPackages, ocamlPackages, coq2html -, tools ? stdenv.cc -, version ? "3.9" -}: - -let - ocaml-pkgs = with ocamlPackages; [ ocaml findlib menhir menhirLib ]; - ccomp-platform = if stdenv.isDarwin then "x86_64-macosx" else "x86_64-linux"; - inherit (coqPackages) coq flocq; - inherit (lib) optional optionalString; -in - -let param = { - "3.7" = { - sha256 = "1h4zhk9rrqki193nxs9vjvya7nl9yxjcf07hfqb6g77riy1vd2jr"; - patches = [ - (fetchpatch { - url = "https://github.com/AbsInt/CompCert/commit/0a2db0269809539ccc66f8ec73637c37fbd23580.patch"; - sha256 = "0n8qrba70x8f422jdvq9ddgsx6avf2dkg892g4ldh3jiiidyhspy"; - }) - (fetchpatch { - url = "https://github.com/AbsInt/CompCert/commit/5e29f8b5ba9582ecf2a1d0baeaef195873640607.patch"; - sha256 = "184nfdgxrkci880lkaj5pgnify3plka7xfgqrgv16275sqppc5hc"; - }) - ]; - }; - "3.8" = { - sha256 = "1gzlyxvw64ca12qql3wnq3bidcx9ygsklv9grjma3ib4hvg7vnr7"; - patches = [ - # Support for Coq 8.12.2 - (fetchpatch { - url = "https://github.com/AbsInt/CompCert/commit/06956421b4307054af221c118c5f59593c0e67b9.patch"; - sha256 = "1f90q6j3xfvnf3z830bkd4d8526issvmdlrjlc95bfsqs78i1yrl"; - }) - # Support for Coq 8.13.0 - (fetchpatch { - url = "https://github.com/AbsInt/CompCert/commit/0895388e7ebf9c9f3176d225107e21968919fb97.patch"; - sha256 = "0qhkzgb2xl5kxys81pldp3mr39gd30lvr2l2wmplij319vp3xavd"; - }) - # Support for Coq 8.13.1 - (fetchpatch { - url = "https://github.com/AbsInt/CompCert/commit/6bf310dd678285dc193798e89fc2c441d8430892.patch"; - sha256 = "026ahhvpj5pksy90f8pnxgmhgwfqk4kwyvcf8x3dsanvz98d4pj5"; - }) - # Drop support for Coq < 8.9 - (fetchpatch { - url = "https://github.com/AbsInt/CompCert/commit/7563a5df926a4c6fb1489a7a4c847641c8a35095.patch"; - sha256 = "05vkslzy399r3dm6dmjs722rrajnyfa30xsyy3djl52isvn4gyfb"; - }) - # Support for Coq 8.13.2 - (fetchpatch { - url = "https://github.com/AbsInt/CompCert/commit/48bc183167c4ce01a5c9ea86e49d60530adf7290.patch"; - sha256 = "0j62lppfk26d1brdp3qwll2wi4gvpx1k70qivpvby5f7dpkrkax1"; - }) - ]; - useExternalFlocq = true; - }; - "3.9" = { - sha256 = "1srcz2dqrvmbvv5cl66r34zqkm0hsbryk7gd3i9xx4slahc9zvdb"; - useExternalFlocq = true; - }; -}."${version}"; in - -stdenv.mkDerivation rec { - pname = "compcert"; - inherit version; - - src = fetchFromGitHub { - owner = "AbsInt"; - repo = "CompCert"; - rev = "v${version}"; - inherit (param) sha256; - }; - - patches = param.patches or []; - - nativeBuildInputs = [ makeWrapper ]; - buildInputs = ocaml-pkgs ++ [ coq coq2html ]; - propagatedBuildInputs = optional (param.useExternalFlocq or false) flocq; - enableParallelBuilding = true; - - postPatch = '' - substituteInPlace ./configure \ - --replace \$\{toolprefix\}ar 'ar' \ - --replace '{toolprefix}gcc' '{toolprefix}cc' - ''; - - configurePhase = '' - ./configure -clightgen \ - -prefix $out \ - -coqdevdir $lib/lib/coq/${coq.coq-version}/user-contrib/compcert/ \ - -toolprefix ${tools}/bin/ \ - ${optionalString (param.useExternalFlocq or false) "-use-external-Flocq"} \ - ${ccomp-platform} - ''; - - installTargets = "documentation install"; - postInstall = '' - # move man into place - mkdir -p $man/share - mv $out/share/man/ $man/share/ - - # move docs into place - mkdir -p $doc/share/doc/compcert - mv doc/html $doc/share/doc/compcert/ - - # wrap ccomp to undefine _FORTIFY_SOURCE; ccomp invokes cc1 which sets - # _FORTIFY_SOURCE=2 by default, but undefines __GNUC__ (as it should), - # which causes a warning in libc. this suppresses it. - for x in ccomp clightgen; do - wrapProgram $out/bin/$x --add-flags "-U_FORTIFY_SOURCE" - done - ''; - - outputs = [ "out" "lib" "doc" "man" ]; - - meta = with lib; { - description = "Formally verified C compiler"; - homepage = "https://compcert.org"; - license = licenses.inria-compcert; - platforms = [ "x86_64-linux" "x86_64-darwin" ]; - maintainers = with maintainers; [ thoughtpolice jwiegley vbgl ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/development/compilers/cudatoolkit/common.nix b/third_party/nixpkgs/pkgs/development/compilers/cudatoolkit/common.nix index 747de25142..c8a1964814 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/cudatoolkit/common.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/cudatoolkit/common.nix @@ -6,7 +6,7 @@ args@ , developerProgram ? false , runPatches ? [] , addOpenGLRunpath -, alsaLib +, alsa-lib , expat , fetchurl , fontconfig @@ -58,7 +58,7 @@ stdenv.mkDerivation rec { runtimeDependencies = [ ncurses5 expat python27 zlib glibc xorg.libX11 xorg.libXext xorg.libXrender xorg.libXt xorg.libXtst xorg.libXi xorg.libXext - gtk2 glib fontconfig freetype unixODBC alsaLib + gtk2 glib fontconfig freetype unixODBC alsa-lib ]; rpath = "${lib.makeLibraryPath runtimeDependencies}:${stdenv.cc.cc.lib}/lib64"; diff --git a/third_party/nixpkgs/pkgs/development/compilers/flutter/default.nix b/third_party/nixpkgs/pkgs/development/compilers/flutter/default.nix index 736178e76c..f7dc6f8e87 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/flutter/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/flutter/default.nix @@ -4,7 +4,7 @@ let getPatches = dir: let files = builtins.attrNames (builtins.readDir dir); in map (f: dir + ("/" + f)) files; - version = "2.0.3"; + version = "2.2.1"; channel = "stable"; filename = "flutter_linux_${version}-${channel}.tar.xz"; in @@ -15,7 +15,7 @@ in pname = "flutter"; src = fetchurl { url = "https://storage.googleapis.com/flutter_infra/releases/${channel}/linux/${filename}"; - sha256 = "14a63cpkp78rgymmlrppds69jsrdarg33dr43nb7s61r0xfh9icm"; + sha256 = "009pwk2casz10gibgjpz08102wxmkq9iq3994b3c2q342g6526g0"; }; patches = getPatches ./patches; }; diff --git a/third_party/nixpkgs/pkgs/development/compilers/flutter/flutter.nix b/third_party/nixpkgs/pkgs/development/compilers/flutter/flutter.nix index 27436d8b61..5cab3b929f 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/flutter/flutter.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/flutter/flutter.nix @@ -14,7 +14,7 @@ , stdenv , lib , fetchurl -, alsaLib +, alsa-lib , dbus , expat , libpulseaudio @@ -107,7 +107,7 @@ let libGLU # for android emulator - alsaLib + alsa-lib dbus expat libpulseaudio diff --git a/third_party/nixpkgs/pkgs/development/compilers/flutter/patches/disable-auto-update.patch b/third_party/nixpkgs/pkgs/development/compilers/flutter/patches/disable-auto-update.patch index 1fe0981368..d0fd363d3c 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/flutter/patches/disable-auto-update.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/flutter/patches/disable-auto-update.patch @@ -1,5 +1,5 @@ diff --git a/bin/internal/shared.sh b/bin/internal/shared.sh -index c44f867746..c9eda34e26 100644 +index be9320210e..6eb50aae95 100644 --- a/bin/internal/shared.sh +++ b/bin/internal/shared.sh @@ -218,8 +218,6 @@ function shared::execute() { @@ -12,16 +12,23 @@ index c44f867746..c9eda34e26 100644 case "$BIN_NAME" in flutter*) diff --git a/packages/flutter_tools/lib/src/runner/flutter_command_runner.dart b/packages/flutter_tools/lib/src/runner/flutter_command_runner.dart -index 3dc7929dd1..e65d70d55b 100644 +index 550a75bc65..c98a4591cc 100644 --- a/packages/flutter_tools/lib/src/runner/flutter_command_runner.dart +++ b/packages/flutter_tools/lib/src/runner/flutter_command_runner.dart -@@ -246,11 +246,7 @@ class FlutterCommandRunner extends CommandRunner { +@@ -244,7 +244,6 @@ class FlutterCommandRunner extends CommandRunner { globals.flutterUsage.suppressAnalytics = true; } - globals.flutterVersion.ensureVersionFile(); final bool machineFlag = topLevelResults['machine'] as bool; -- if (topLevelResults.command?.name != 'upgrade' && topLevelResults['version-check'] as bool && !machineFlag) { + final bool ci = await globals.botDetector.isRunningOnBot; + final bool redirectedCompletion = !globals.stdio.hasTerminal && +@@ -253,10 +252,6 @@ class FlutterCommandRunner extends CommandRunner { + final bool versionCheckFlag = topLevelResults['version-check'] as bool; + final bool explicitVersionCheckPassed = topLevelResults.wasParsed('version-check') && versionCheckFlag; + +- if (topLevelResults.command?.name != 'upgrade' && +- (explicitVersionCheckPassed || (versionCheckFlag && !isMachine))) { - await globals.flutterVersion.checkFlutterVersionFreshness(); - } diff --git a/third_party/nixpkgs/pkgs/development/compilers/flutter/patches/move-cache.patch b/third_party/nixpkgs/pkgs/development/compilers/flutter/patches/move-cache.patch index d6a45a97e5..2610c15580 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/flutter/patches/move-cache.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/flutter/patches/move-cache.patch @@ -1,24 +1,24 @@ diff --git a/packages/flutter_tools/lib/src/asset.dart b/packages/flutter_tools/lib/src/asset.dart -index a6c59bae07..21f6c9812a 100644 +index 80fb16673f..5723f93f9f 100644 --- a/packages/flutter_tools/lib/src/asset.dart +++ b/packages/flutter_tools/lib/src/asset.dart -@@ -5,6 +5,7 @@ +@@ -7,6 +7,7 @@ import 'package:meta/meta.dart'; import 'package:package_config/package_config.dart'; +import 'base/common.dart'; import 'base/context.dart'; + import 'base/deferred_component.dart'; import 'base/file_system.dart'; - import 'base/logger.dart'; -@@ -14,6 +15,7 @@ import 'cache.dart'; +@@ -16,6 +17,7 @@ import 'build_info.dart'; + import 'cache.dart'; import 'convert.dart'; import 'dart/package_map.dart'; - import 'devfs.dart'; +import 'globals.dart' as globals; + import 'devfs.dart'; import 'flutter_manifest.dart'; import 'license_collector.dart'; - import 'project.dart'; -@@ -377,7 +379,7 @@ class ManifestAssetBundle implements AssetBundle { +@@ -449,7 +451,7 @@ class ManifestAssetBundle implements AssetBundle { for (final Map font in family['fonts'] as List>) { final Uri entryUri = _fileSystem.path.toUri(font['asset'] as String); result.add(_Asset( @@ -28,32 +28,40 @@ index a6c59bae07..21f6c9812a 100644 entryUri: entryUri, package: null, diff --git a/packages/flutter_tools/lib/src/cache.dart b/packages/flutter_tools/lib/src/cache.dart -index 11e3bf3e11..39d6fae0d1 100644 +index 152d4e75e5..1fcff7e2bd 100644 --- a/packages/flutter_tools/lib/src/cache.dart +++ b/packages/flutter_tools/lib/src/cache.dart -@@ -321,8 +321,15 @@ class Cache { +@@ -9,6 +9,7 @@ import 'package:file/memory.dart'; + import 'package:meta/meta.dart'; + import 'package:process/process.dart'; + ++import 'globals.dart' as globals; + import 'base/common.dart'; + import 'base/error_handling_io.dart'; + import 'base/file_system.dart'; +@@ -298,8 +299,15 @@ class Cache { return; } assert(_lock == null); + -+ final Directory dir = _fileSystem.directory(_fileSystem.path.join(globals.fsUtils.homeDirPath, '.cache', 'flutter')); ++ final Directory dir = _fileSystem.directory(_fileSystem.path.join(globals.fsUtils.homeDirPath!, '.cache', 'flutter')); + if (!dir.existsSync()) { + dir.createSync(recursive: true); + globals.os.chmod(dir, '755'); + } + final File lockFile = -- _fileSystem.file(_fileSystem.path.join(flutterRoot, 'bin', 'cache', 'lockfile')); -+ _fileSystem.file(_fileSystem.path.join(globals.fsUtils.homeDirPath, '.cache', 'flutter', 'lockfile')); +- _fileSystem.file(_fileSystem.path.join(flutterRoot!, 'bin', 'cache', 'lockfile')); ++ _fileSystem.file(_fileSystem.path.join(globals.fsUtils.homeDirPath!, '.cache', 'flutter', 'lockfile')); try { _lock = lockFile.openSync(mode: FileMode.write); } on FileSystemException catch (e) { -@@ -424,7 +431,7 @@ class Cache { +@@ -404,7 +412,7 @@ class Cache { if (_rootOverride != null) { - return _fileSystem.directory(_fileSystem.path.join(_rootOverride.path, 'bin', 'cache')); + return _fileSystem.directory(_fileSystem.path.join(_rootOverride!.path, 'bin', 'cache')); } else { -- return _fileSystem.directory(_fileSystem.path.join(flutterRoot, 'bin', 'cache')); -+ return _fileSystem.directory(_fileSystem.path.join(globals.fsUtils.homeDirPath, '.cache', 'flutter')); +- return _fileSystem.directory(_fileSystem.path.join(flutterRoot!, 'bin', 'cache')); ++ return _fileSystem.directory(_fileSystem.path.join(globals.fsUtils.homeDirPath!, '.cache', 'flutter')); } } diff --git a/third_party/nixpkgs/pkgs/development/compilers/fsharp41/default.nix b/third_party/nixpkgs/pkgs/development/compilers/fsharp41/default.nix deleted file mode 100644 index e9f9088df3..0000000000 --- a/third_party/nixpkgs/pkgs/development/compilers/fsharp41/default.nix +++ /dev/null @@ -1,126 +0,0 @@ -# Temporaririly avoid dependency on dotnetbuildhelpers to avoid rebuilding many times while working on it - -{ lib, stdenv, fetchurl, pkg-config, autoconf, automake, which, mono, msbuild, dotnetbuildhelpers, dotnetPackages }: - -stdenv.mkDerivation rec { - pname = "fsharp"; - version = "4.1.34"; - - src = fetchurl { - url = "https://github.com/fsharp/fsharp/archive/${version}.tar.gz"; - sha256 = "0cv6p5pin962vhbpsji40nkckkag5c96kq5qihvg60pc1z821p0i"; - }; - - nativeBuildInputs = [ pkg-config ]; - buildInputs = [ - autoconf - automake - which - mono - msbuild - dotnetbuildhelpers - dotnetPackages.FsCheck262 - dotnetPackages.FSharpCompilerTools - dotnetPackages.FSharpCore302 - dotnetPackages.FSharpCore3125 - dotnetPackages.FSharpCore4001 - dotnetPackages.FSharpCore4117 - dotnetPackages.FSharpData225 - dotnetPackages.FsLexYacc706 - dotnetPackages.MicrosoftDiaSymReader - dotnetPackages.MicrosoftDiaSymReaderPortablePdb - dotnetPackages.NUnit350 - dotnetPackages.SystemCollectionsImmutable131 - dotnetPackages.SystemReflectionMetadata - dotnetPackages.SystemValueTuple - ]; - - # https://github.com/mono/mono/tree/fe0f311a848068ab2d17a9b9dd15326e5712d520/packaging/MacSDK/patches - # https://github.com/mono/mono/issues/7805 - patches = [ - ./fsharp-IsPathRooted-type-inference.patch - ./fsharp-string-switchName.patch - ./fsharp-path-overloads.patch - ./fsharp-GetFileNameWithoutExtension-type-inference.patch - ]; - - configurePhase = '' - substituteInPlace ./autogen.sh --replace "/usr/bin/env sh" "${stdenv.shell}" - ./autogen.sh --prefix $out - ''; - - preBuild = '' - substituteInPlace Makefile --replace "MONO_ENV_OPTIONS=\$(monoopts) mono .nuget/NuGet.exe restore packages.config -PackagesDirectory packages -ConfigFile .nuget/NuGet.Config" "true" - substituteInPlace src/fsharp/Fsc-proto/Fsc-proto.fsproj --replace "" "" - substituteInPlace src/fsharp/Fsc-proto/Fsc-proto.fsproj --replace "" "" - substituteInPlace src/fsharp/Fsc-proto/Fsc-proto.fsproj --replace "" "" - substituteInPlace src/fsharp/Fsc-proto/Fsc-proto.fsproj --replace "" "" - - rm -rf packages - mkdir packages - - ln -s ${dotnetPackages.FsCheck262}/lib/dotnet/FsCheck packages/FsCheck.2.6.2 - ln -s ${dotnetPackages.FSharpCompilerTools}/lib/dotnet/FSharp.Compiler.Tools packages/FSharp.Compiler.Tools.4.1.27 - ln -s ${dotnetPackages.FSharpCore302}/lib/dotnet/FSharp.Core/ packages/FSharp.Core.3.0.2 - ln -s ${dotnetPackages.FSharpCore3125}/lib/dotnet/FSharp.Core/ packages/FSharp.Core.3.1.2.5 - ln -s ${dotnetPackages.FSharpCore4001}/lib/dotnet/FSharp.Core/ packages/FSharp.Core.4.0.0.1 - ln -s ${dotnetPackages.FSharpCore4117}/lib/dotnet/FSharp.Core/ packages/FSharp.Core.4.1.17 - ln -s ${dotnetPackages.FSharpData225}/lib/dotnet/FSharp.Data/ packages/FSharp.Data.2.2.5 - ln -s ${dotnetPackages.FsLexYacc706}/lib/dotnet/FsLexYacc/ packages/FsLexYacc.7.0.6 - ln -s ${dotnetPackages.MicrosoftDiaSymReader}/lib/dotnet/Microsoft.DiaSymReader/ packages/Microsoft.DiaSymReader.1.1.0 - ln -s ${dotnetPackages.MicrosoftDiaSymReaderPortablePdb}/lib/dotnet/Microsoft.DiaSymReader.PortablePdb/ packages/Microsoft.DiaSymReader.PortablePdb.1.2.0 - ln -s ${dotnetPackages.NUnit350}/lib/dotnet/NUnit/ packages/NUnit.3.5.0 - ln -s ${dotnetPackages.SystemCollectionsImmutable131}/lib/dotnet/System.Collections.Immutable/ packages/System.Collections.Immutable.1.3.1 - ln -s ${dotnetPackages.SystemReflectionMetadata}/lib/dotnet/System.Reflection.Metadata/ packages/System.Reflection.Metadata.1.4.2 - ln -s ${dotnetPackages.SystemValueTuple}/lib/dotnet/System.ValueTuple/ packages/System.ValueTuple.4.3.1 - ''; - - # Signing /home/jdanek/nix/nixpkgs/build/fss/fsharp-4.1.34/again/fsharp-4.1.34/Release/fsharp30/net40/bin/FSharp.Core.dll with Mono key - # ERROR: Unknown error during processing: System.UnauthorizedAccessException: Access to the path - # "Release/fsharp30/net40/bin/FSharp.Core.dll" is denied. - preInstall = '' - find Release/ -name FSharp.Core.dll -exec chmod u+w {} \; - ''; - - # Set up some symlinks for backwards compatibility. - postInstall = '' - ln -s $out/bin/fsharpc $out/bin/fsc - ln -s $out/bin/fsharpi $out/bin/fsi - for dll in "$out/lib/mono/fsharp"/FSharp*.dll - do - create-pkg-config-for-dll.sh "$out/lib/pkgconfig" "$dll" - done - ''; - - doInstallCheck = true; - installCheckPhase = '' - echo 'printf "int = %i" (6 * 7);;' > script.fsx - $out/bin/fsi --exec script.fsx | grep "int = 42" - $out/bin/fsharpi --exec script.fsx | grep "int = 42" - $out/bin/fsharpiAnyCpu --exec script.fsx | grep "int = 42" - - cat > answer.fs <] -let main argv = - printfn "int = %i" (6 * 7) - 0 -EOF - - $out/bin/fsc answer.fs - ${mono}/bin/mono answer.exe | grep "int = 42" - ''; - - # To fix this error when running: - # The file "/nix/store/path/whatever.exe" is an not a valid CIL image - dontStrip = true; - - meta = { - description = "A functional CLI language"; - homepage = "https://fsharp.org/"; - license = lib.licenses.asl20; - maintainers = with lib.maintainers; [ thoughtpolice raskin ]; - platforms = with lib.platforms; unix; - }; -} diff --git a/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-GetFileNameWithoutExtension-type-inference.patch b/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-GetFileNameWithoutExtension-type-inference.patch deleted file mode 100644 index 14e9444b1d..0000000000 --- a/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-GetFileNameWithoutExtension-type-inference.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/src/scripts/fssrgen.fsx b/src/scripts/fssrgen.fsx -index 0bee9b79e..e6ceda11e 100644 ---- a/src/scripts/fssrgen.fsx -+++ b/src/scripts/fssrgen.fsx -@@ -329,7 +329,7 @@ let StringBoilerPlate filename = - // END BOILERPLATE - " - --let RunMain(filename, outFilename, outXmlFilenameOpt, projectNameOpt) = -+let RunMain(filename:string, outFilename, outXmlFilenameOpt, projectNameOpt) = - try - let justfilename = System.IO.Path.GetFileNameWithoutExtension(filename) - if justfilename |> Seq.exists (fun c -> not(System.Char.IsLetterOrDigit(c))) then diff --git a/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-IsPathRooted-type-inference.patch b/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-IsPathRooted-type-inference.patch deleted file mode 100644 index 06dd3e82ad..0000000000 --- a/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-IsPathRooted-type-inference.patch +++ /dev/null @@ -1,21 +0,0 @@ -commit c37fce5b3019c7a150203fc3a484885591b194de -Author: Alexis Christoforides -Date: Sun Dec 2 00:10:24 2018 -0500 - - Help Path.IsPathRooted method overload selection. - - .NET Core, and Mono after merging https://github.com/mono/mono/pull/11342, introduce ambiguity with a new overload. - -diff --git a/src/scripts/scriptlib.fsx b/src/scripts/scriptlib.fsx -index cc797e305..699c7bb93 100644 ---- a/src/scripts/scriptlib.fsx -+++ b/src/scripts/scriptlib.fsx -@@ -92,7 +92,7 @@ module Scripting = - - module Process = - -- let processExePath baseDir exe = -+ let processExePath baseDir (exe:string) = - if Path.IsPathRooted(exe) then exe - else - match Path.GetDirectoryName(exe) with diff --git a/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-path-overloads.patch b/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-path-overloads.patch deleted file mode 100644 index f791317d08..0000000000 --- a/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-path-overloads.patch +++ /dev/null @@ -1,22 +0,0 @@ -diff --git a/src/scripts/scriptlib.fsx b/src/scripts/scriptlib.fsx -index cc797e305..ae8a6d3cc 100644 ---- a/src/scripts/scriptlib.fsx -+++ b/src/scripts/scriptlib.fsx -@@ -59,12 +59,12 @@ module Scripting = - - let (++) a b = Path.Combine(a,b) - -- let getBasename a = Path.GetFileNameWithoutExtension a -- let getFullPath a = Path.GetFullPath a -- let getFilename a = Path.GetFileName a -- let getDirectoryName a = Path.GetDirectoryName a -+ let getBasename (path: string) = Path.GetFileNameWithoutExtension path -+ let getFullPath (path: string) = Path.GetFullPath path -+ let getFilename (path: string) = Path.GetFileName path -+ let getDirectoryName (path: string) = Path.GetDirectoryName path - -- let copyFile source dir = -+ let copyFile (source: string) dir = - let dest = - if not (Directory.Exists dir) then Directory.CreateDirectory dir |>ignore - let result = Path.Combine(dir, Path.GetFileName source) diff --git a/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-string-switchName.patch b/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-string-switchName.patch deleted file mode 100644 index 4b36eaabca..0000000000 --- a/third_party/nixpkgs/pkgs/development/compilers/fsharp41/fsharp-string-switchName.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/src/scripts/scriptlib.fsx b/src/scripts/scriptlib.fsx -index cc797e305..5a7be7d2b 100644 ---- a/src/scripts/scriptlib.fsx -+++ b/src/scripts/scriptlib.fsx -@@ -36,7 +36,7 @@ module Scripting = - #if INTERACTIVE - let argv = Microsoft.FSharp.Compiler.Interactive.Settings.fsi.CommandLineArgs |> Seq.skip 1 |> Seq.toArray - -- let getCmdLineArgOptional switchName = -+ let getCmdLineArgOptional (switchName: string) = - argv |> Array.filter(fun t -> t.StartsWith(switchName)) |> Array.map(fun t -> t.Remove(0, switchName.Length).Trim()) |> Array.tryHead - - let getCmdLineArg switchName defaultValue = diff --git a/third_party/nixpkgs/pkgs/development/compilers/gcc/10/default.nix b/third_party/nixpkgs/pkgs/development/compilers/gcc/10/default.nix index f8f4ad71e3..143681c2a5 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/gcc/10/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/gcc/10/default.nix @@ -282,11 +282,7 @@ stdenv.mkDerivation ({ maintainers = lib.teams.gcc.members; - platforms = - lib.platforms.linux ++ - lib.platforms.freebsd ++ - lib.platforms.illumos ++ - lib.platforms.darwin; + platforms = lib.platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/gcc/11/default.nix b/third_party/nixpkgs/pkgs/development/compilers/gcc/11/default.nix index fe29440c25..7efc9d589f 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/gcc/11/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/gcc/11/default.nix @@ -287,11 +287,7 @@ stdenv.mkDerivation ({ maintainers = lib.teams.gcc.members; - platforms = - lib.platforms.linux ++ - lib.platforms.freebsd ++ - lib.platforms.illumos ++ - lib.platforms.darwin; + platforms = lib.platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/gcc/4.8/default.nix b/third_party/nixpkgs/pkgs/development/compilers/gcc/4.8/default.nix index 86dd9247f5..98332290a0 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/gcc/4.8/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/gcc/4.8/default.nix @@ -309,11 +309,7 @@ stdenv.mkDerivation ({ maintainers = with lib.maintainers; [ peti veprbl ]; - platforms = - lib.platforms.linux ++ - lib.platforms.freebsd ++ - lib.platforms.illumos ++ - lib.platforms.darwin; + platforms = lib.platforms.unix; badPlatforms = [ "x86_64-darwin" ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/gcc/4.9/default.nix b/third_party/nixpkgs/pkgs/development/compilers/gcc/4.9/default.nix index b7c9e5bcc0..a15cb770fd 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/gcc/4.9/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/gcc/4.9/default.nix @@ -321,11 +321,7 @@ stdenv.mkDerivation ({ maintainers = with lib.maintainers; [ peti veprbl ]; - platforms = - lib.platforms.linux ++ - lib.platforms.freebsd ++ - lib.platforms.illumos ++ - lib.platforms.darwin; + platforms = lib.platforms.unix; badPlatforms = [ "x86_64-darwin" ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/gcc/6/default.nix b/third_party/nixpkgs/pkgs/development/compilers/gcc/6/default.nix index b70d8a57b9..4567e8b43e 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/gcc/6/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/gcc/6/default.nix @@ -343,11 +343,7 @@ stdenv.mkDerivation ({ maintainers = with lib.maintainers; [ peti ]; - platforms = - lib.platforms.linux ++ - lib.platforms.freebsd ++ - lib.platforms.illumos ++ - lib.platforms.darwin; + platforms = lib.platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/gcc/7/default.nix b/third_party/nixpkgs/pkgs/development/compilers/gcc/7/default.nix index 5eb4389be3..44e8b38fdf 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/gcc/7/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/gcc/7/default.nix @@ -296,11 +296,7 @@ stdenv.mkDerivation ({ maintainers = lib.teams.gcc.members; - platforms = - lib.platforms.linux ++ - lib.platforms.freebsd ++ - lib.platforms.illumos ++ - lib.platforms.darwin; + platforms = lib.platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/gcc/8/default.nix b/third_party/nixpkgs/pkgs/development/compilers/gcc/8/default.nix index ca1b31467a..b264d37418 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/gcc/8/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/gcc/8/default.nix @@ -278,11 +278,7 @@ stdenv.mkDerivation ({ maintainers = lib.teams.gcc.members; - platforms = - lib.platforms.linux ++ - lib.platforms.freebsd ++ - lib.platforms.illumos ++ - lib.platforms.darwin; + platforms = lib.platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/gcc/9/default.nix b/third_party/nixpkgs/pkgs/development/compilers/gcc/9/default.nix index 93e75389bd..857263e51e 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/gcc/9/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/gcc/9/default.nix @@ -297,11 +297,7 @@ stdenv.mkDerivation ({ maintainers = lib.teams.gcc.members; - platforms = - lib.platforms.linux ++ - lib.platforms.freebsd ++ - lib.platforms.illumos ++ - lib.platforms.darwin; + platforms = lib.platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/ghc/8.10.4.nix b/third_party/nixpkgs/pkgs/development/compilers/ghc/8.10.4.nix index da957f9352..f007dcf789 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/ghc/8.10.4.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/ghc/8.10.4.nix @@ -89,9 +89,19 @@ let targetCC = builtins.head toolsForTarget; - # ld.gold is disabled for musl libc due to https://sourceware.org/bugzilla/show_bug.cgi?id=23856 + # Use gold either following the default, or to avoid the BFD linker due to some bugs / perf issues. + # But we cannot avoid BFD when using musl libc due to https://sourceware.org/bugzilla/show_bug.cgi?id=23856 # see #84670 and #49071 for more background. - useLdGold = targetPlatform.isLinux && !(targetPlatform.useLLVM or false) && !targetPlatform.isMusl; + useLdGold = targetPlatform.linker == "gold" || (targetPlatform.linker == "bfd" && !targetPlatform.isMusl); + + runtimeDeps = [ + targetPackages.stdenv.cc.bintools + coreutils + ] + # On darwin, we need unwrapped bintools as well (for otool) + ++ lib.optionals (stdenv.targetPlatform.linker == "cctools") [ + targetPackages.stdenv.cc.bintools.bintools + ]; in stdenv.mkDerivation (rec { @@ -115,6 +125,9 @@ stdenv.mkDerivation (rec { # upstream patch. Don't forget to check backport status of the upstream patch # when adding new GHC releases in nixpkgs. ./respect-ar-path.patch + # Fix documentation configuration which causes a syntax error with sphinx 4.* + # See https://gitlab.haskell.org/ghc/ghc/-/issues/19962, remove at 8.10.6. + ./sphinx-4-configuration.patch ] ++ lib.optionals stdenv.isDarwin [ # Make Block.h compile with c++ compilers. Remove with the next release (fetchpatch { @@ -235,7 +248,7 @@ stdenv.mkDerivation (rec { for i in "$out/bin/"*; do test ! -h $i || continue egrep --quiet '^#!' <(head -n 1 $i) || continue - sed -i -e '2i export PATH="$PATH:${lib.makeBinPath [ targetPackages.stdenv.cc.bintools coreutils ]}"' $i + sed -i -e '2i export PATH="$PATH:${lib.makeBinPath runtimeDeps}"' $i done ''; diff --git a/third_party/nixpkgs/pkgs/development/compilers/ghc/8.8.4.nix b/third_party/nixpkgs/pkgs/development/compilers/ghc/8.8.4.nix index b0336ad399..544b96f5e4 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/ghc/8.8.4.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/ghc/8.8.4.nix @@ -98,9 +98,19 @@ let targetCC = builtins.head toolsForTarget; - # ld.gold is disabled for musl libc due to https://sourceware.org/bugzilla/show_bug.cgi?id=23856 + # Use gold either following the default, or to avoid the BFD linker due to some bugs / perf issues. + # But we cannot avoid BFD when using musl libc due to https://sourceware.org/bugzilla/show_bug.cgi?id=23856 # see #84670 and #49071 for more background. - useLdGold = targetPlatform.isLinux && !(targetPlatform.useLLVM or false) && !targetPlatform.isMusl; + useLdGold = targetPlatform.linker == "gold" || (targetPlatform.linker == "bfd" && !targetPlatform.isMusl); + + runtimeDeps = [ + targetPackages.stdenv.cc.bintools + coreutils + ] + # On darwin, we need unwrapped bintools as well (for otool) + ++ lib.optionals (stdenv.targetPlatform.linker == "cctools") [ + targetPackages.stdenv.cc.bintools.bintools + ]; in stdenv.mkDerivation (rec { @@ -124,6 +134,9 @@ stdenv.mkDerivation (rec { # upstream patch. Don't forget to check backport status of the upstream patch # when adding new GHC releases in nixpkgs. ./respect-ar-path.patch + # Fix documentation configuration which causes a syntax error with sphinx 4.* + # See also https://gitlab.haskell.org/ghc/ghc/-/issues/19962 + ./sphinx-4-configuration.patch ]; postPatch = "patchShebangs ."; @@ -242,7 +255,7 @@ stdenv.mkDerivation (rec { for i in "$out/bin/"*; do test ! -h $i || continue egrep --quiet '^#!' <(head -n 1 $i) || continue - sed -i -e '2i export PATH="$PATH:${lib.makeBinPath [ targetPackages.stdenv.cc.bintools coreutils ]}"' $i + sed -i -e '2i export PATH="$PATH:${lib.makeBinPath runtimeDeps}"' $i done ''; diff --git a/third_party/nixpkgs/pkgs/development/compilers/ghc/9.0.1.nix b/third_party/nixpkgs/pkgs/development/compilers/ghc/9.0.1.nix index 58beef5d68..f5a6b5f32f 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/ghc/9.0.1.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/ghc/9.0.1.nix @@ -90,9 +90,19 @@ let targetCC = builtins.head toolsForTarget; - # ld.gold is disabled for musl libc due to https://sourceware.org/bugzilla/show_bug.cgi?id=23856 + # Use gold either following the default, or to avoid the BFD linker due to some bugs / perf issues. + # But we cannot avoid BFD when using musl libc due to https://sourceware.org/bugzilla/show_bug.cgi?id=23856 # see #84670 and #49071 for more background. - useLdGold = targetPlatform.isLinux && !(targetPlatform.useLLVM or false) && !targetPlatform.isMusl; + useLdGold = targetPlatform.linker == "gold" || (targetPlatform.linker == "bfd" && !targetPlatform.isMusl); + + runtimeDeps = [ + targetPackages.stdenv.cc.bintools + coreutils + ] + # On darwin, we need unwrapped bintools as well (for otool) + ++ lib.optionals (stdenv.targetPlatform.linker == "cctools") [ + targetPackages.stdenv.cc.bintools.bintools + ]; in stdenv.mkDerivation (rec { @@ -225,7 +235,7 @@ stdenv.mkDerivation (rec { for i in "$out/bin/"*; do test ! -h $i || continue egrep --quiet '^#!' <(head -n 1 $i) || continue - sed -i -e '2i export PATH="$PATH:${lib.makeBinPath [ targetPackages.stdenv.cc.bintools coreutils ]}"' $i + sed -i -e '2i export PATH="$PATH:${lib.makeBinPath runtimeDeps}"' $i done ''; diff --git a/third_party/nixpkgs/pkgs/development/compilers/ghc/head.nix b/third_party/nixpkgs/pkgs/development/compilers/ghc/head.nix index a0ca13270a..ec236731af 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/ghc/head.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/ghc/head.nix @@ -100,9 +100,19 @@ let targetCC = builtins.head toolsForTarget; - # ld.gold is disabled for musl libc due to https://sourceware.org/bugzilla/show_bug.cgi?id=23856 + # Use gold either following the default, or to avoid the BFD linker due to some bugs / perf issues. + # But we cannot avoid BFD when using musl libc due to https://sourceware.org/bugzilla/show_bug.cgi?id=23856 # see #84670 and #49071 for more background. - useLdGold = targetPlatform.isLinux && !(targetPlatform.useLLVM or false) && !targetPlatform.isMusl; + useLdGold = targetPlatform.linker == "gold" || (targetPlatform.linker == "bfd" && !targetPlatform.isMusl); + + runtimeDeps = [ + targetPackages.stdenv.cc.bintools + coreutils + ] + # On darwin, we need unwrapped bintools as well (for otool) + ++ lib.optionals (stdenv.targetPlatform.linker == "cctools") [ + targetPackages.stdenv.cc.bintools.bintools + ]; in stdenv.mkDerivation (rec { @@ -242,7 +252,7 @@ stdenv.mkDerivation (rec { for i in "$out/bin/"*; do test ! -h $i || continue egrep --quiet '^#!' <(head -n 1 $i) || continue - sed -i -e '2i export PATH="$PATH:${lib.makeBinPath [ targetPackages.stdenv.cc.bintools coreutils ]}"' $i + sed -i -e '2i export PATH="$PATH:${lib.makeBinPath runtimeDeps}"' $i done ''; diff --git a/third_party/nixpkgs/pkgs/development/compilers/ghc/sphinx-4-configuration.patch b/third_party/nixpkgs/pkgs/development/compilers/ghc/sphinx-4-configuration.patch new file mode 100644 index 0000000000..884a0bb39a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/ghc/sphinx-4-configuration.patch @@ -0,0 +1,11 @@ +--- ghc-8.10.4/docs/users_guide/conf.py.orig 2021-06-21 13:46:34.196383559 +0200 ++++ ghc-8.10.4/docs/users_guide/conf.py 2021-06-21 13:46:54.839349941 +0200 +@@ -100,7 +100,7 @@ + latex_elements = { + 'inputenc': '', + 'utf8extra': '', +- 'preamble': ''' ++ 'preamble': r''' + \usepackage{fontspec} + \usepackage{makeidx} + \setsansfont{DejaVu Sans} diff --git a/third_party/nixpkgs/pkgs/development/compilers/gleam/default.nix b/third_party/nixpkgs/pkgs/development/compilers/gleam/default.nix index 7bce45c455..5c88be00ba 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/gleam/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/gleam/default.nix @@ -2,13 +2,13 @@ rustPlatform.buildRustPackage rec { pname = "gleam"; - version = "0.15.1"; + version = "0.16.0"; src = fetchFromGitHub { owner = "gleam-lang"; repo = pname; rev = "v${version}"; - sha256 = "sha256-vBxVGIgg2BpVvEYjmX99YSf1zy9aWOHr6ftaYxJWkzY="; + sha256 = "sha256-QcJudP4zhtY1CxV3XLkiC06hrKOqlLdb+X6lHvqc7ZA="; }; nativeBuildInputs = [ pkg-config ]; @@ -16,7 +16,7 @@ rustPlatform.buildRustPackage rec { buildInputs = [ openssl ] ++ lib.optionals stdenv.isDarwin [ Security libiconv ]; - cargoSha256 = "sha256-2zHc7xk5MuEUO9YGifSWbgRTi51ZUk84QLro94LsBtQ="; + cargoSha256 = "sha256-een2aI6gDVx450mQcwF1uRG/tn9FzahTMWpPdvUBumE="; meta = with lib; { description = "A statically typed language for the Erlang VM"; diff --git a/third_party/nixpkgs/pkgs/development/compilers/graalvm/community-edition.nix b/third_party/nixpkgs/pkgs/development/compilers/graalvm/community-edition.nix index 3a8fca2c1a..8669b57dcc 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/graalvm/community-edition.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/graalvm/community-edition.nix @@ -6,7 +6,7 @@ , makeWrapper # minimum dependencies , Foundation -, alsaLib +, alsa-lib , fontconfig , freetype , glibc @@ -82,7 +82,7 @@ let ]; buildInputs = lib.optionals stdenv.isLinux [ - alsaLib # libasound.so wanted by lib/libjsound.so + alsa-lib # libasound.so wanted by lib/libjsound.so fontconfig freetype openssl # libssl.so wanted by languages/ruby/lib/mri/openssl.so @@ -180,7 +180,10 @@ let rm $out/jre/lib/jvmci/parentClassLoader.classpath ''; "11-darwin-amd64" = '' - echo "" + # BUG workaround http://mail.openjdk.java.net/pipermail/graal-dev/2017-December/005141.html + substituteInPlace $out/conf/security/java.security \ + --replace file:/dev/random file:/dev/./urandom \ + --replace NativePRNGBlocking SHA1PRNG ''; }.${javaVersionPlatform}; @@ -259,7 +262,8 @@ let ''} echo '1 + 1' | $out/bin/node -i - ${lib.optionalString (javaVersion == "11") '' + ${lib.optionalString (javaVersion == "11" && stdenv.isLinux) '' + # Doesn't work on MacOS, we have this error: "Launching JShell execution engine threw: Operation not permitted (Bind failed)" echo '1 + 1' | $out/bin/jshell ''}''; @@ -269,7 +273,7 @@ let homepage = "https://www.graalvm.org/"; description = "High-Performance Polyglot VM"; license = with licenses; [ upl gpl2Classpath bsd3 ]; - maintainers = with maintainers; [ bandresen volth hlolli glittershark ]; + maintainers = with maintainers; [ bandresen volth hlolli glittershark babariviere ]; platforms = [ "x86_64-linux" "x86_64-darwin" ]; }; }; diff --git a/third_party/nixpkgs/pkgs/development/compilers/graalvm/enterprise-edition.nix b/third_party/nixpkgs/pkgs/development/compilers/graalvm/enterprise-edition.nix index eb3045d52a..f3ca8a4f5b 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/graalvm/enterprise-edition.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/graalvm/enterprise-edition.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, requireFile, perl, unzip, glibc, zlib, bzip2, gdk-pixbuf, xorg, glib, fontconfig, freetype, cairo, pango, gtk3, gtk2, ffmpeg, libGL, atk, alsaLib, setJavaClassPath }: +{ lib, stdenv, requireFile, perl, unzip, glibc, zlib, bzip2, gdk-pixbuf, xorg, glib, fontconfig, freetype, cairo, pango, gtk3, gtk2, ffmpeg, libGL, atk, alsa-lib, setJavaClassPath }: let common = javaVersion: @@ -125,7 +125,7 @@ let }.${javaVersion} }:${ lib.strings.makeLibraryPath [ glibc xorg.libXxf86vm xorg.libX11 xorg.libXext xorg.libXtst xorg.libXi xorg.libXrender - glib zlib bzip2 alsaLib fontconfig freetype pango gtk3 gtk2 cairo gdk-pixbuf atk ffmpeg libGL ]}" + glib zlib bzip2 alsa-lib fontconfig freetype pango gtk3 gtk2 cairo gdk-pixbuf atk ffmpeg libGL ]}" for f in $(find $out -type f -perm -0100); do patchelf --interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" "$f" || true diff --git a/third_party/nixpkgs/pkgs/development/compilers/idris2/default.nix b/third_party/nixpkgs/pkgs/development/compilers/idris2/default.nix index ec0d8fe5c7..ac0f331241 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/idris2/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/idris2/default.nix @@ -1,22 +1,35 @@ -{ lib, stdenv, fetchFromGitHub, makeWrapper -, clang, chez +{ lib +, stdenv +, fetchFromGitHub +, makeWrapper +, clang +, chez +, gmp +, zsh }: +# NOTICE: An `idris2WithPackages` is available at: https://github.com/claymager/idris2-pkgs + # Uses scheme to bootstrap the build of idris2 stdenv.mkDerivation rec { pname = "idris2"; - version = "0.3.0"; + version = "0.4.0"; src = fetchFromGitHub { owner = "idris-lang"; repo = "Idris2"; rev = "v${version}"; - sha256 = "0sa2lpb7n6xqfknwld9rzm4bnb6qcd0ja1n63cnc5v8wdzr8q7kh"; + sha256 = "105jybjf5s0k6003qzfxchzsfcpsxip180bh3mdmi74d464d0h8g"; }; + # We do not add any propagatedNativeBuildInputs because we do not want the + # executables idris2 produces to depend on the nix-store. As such, it is left + # to the user to guarantee chez (or any other codgen dependency) is available + # in the path during compilation of programs with idris2. strictDeps = true; - nativeBuildInputs = [ makeWrapper clang chez ]; - buildInputs = [ chez ]; + nativeBuildInputs = [ makeWrapper clang chez ] + ++ lib.optional stdenv.isDarwin [ zsh ]; + buildInputs = [ gmp ]; prePatch = '' patchShebangs --build tests @@ -26,9 +39,9 @@ stdenv.mkDerivation rec { ++ lib.optional stdenv.isDarwin "OS="; # The name of the main executable of pkgs.chez is `scheme` - buildFlags = [ "bootstrap-build" "SCHEME=scheme" ]; + buildFlags = [ "bootstrap" "SCHEME=scheme" ]; - checkTarget = "bootstrap-test"; + checkTarget = "test"; # TODO: Move this into its own derivation, such that this can be changed # without having to recompile idris2 every time. @@ -72,7 +85,7 @@ stdenv.mkDerivation rec { description = "A purely functional programming language with first class types"; homepage = "https://github.com/idris-lang/Idris2"; license = lib.licenses.bsd3; - maintainers = with lib.maintainers; [ wchresta ]; + maintainers = with lib.maintainers; [ fabianhjr wchresta ]; inherit (chez.meta) platforms; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/jetbrains-jdk/default.nix b/third_party/nixpkgs/pkgs/development/compilers/jetbrains-jdk/default.nix index 4012aa260f..f3bd5d9f4a 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/jetbrains-jdk/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/jetbrains-jdk/default.nix @@ -24,9 +24,8 @@ openjdk11.overrideAttrs (oldAttrs: rec { your own risk. ''; homepage = "https://bintray.com/jetbrains/intellij-jdk/"; - license = licenses.gpl2; + inherit (openjdk11.meta) license platforms mainProgram; maintainers = with maintainers; [ edwtjo petabyteboy ]; - platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" "armv7l-linux" "armv6l-linux" ]; }; passthru = oldAttrs.passthru // { home = "${jetbrains.jdk}/lib/openjdk"; diff --git a/third_party/nixpkgs/pkgs/development/compilers/jrsonnet/default.nix b/third_party/nixpkgs/pkgs/development/compilers/jrsonnet/default.nix new file mode 100644 index 0000000000..82e15db668 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/jrsonnet/default.nix @@ -0,0 +1,26 @@ +{ stdenv, lib, fetchFromGitHub, rustPlatform }: + +rustPlatform.buildRustPackage rec { + pname = "jrsonnet"; + version = "0.3.8"; + + src = fetchFromGitHub { + rev = "v${version}"; + owner = "CertainLach"; + repo = "jrsonnet"; + sha256 = "sha256-u6P/j7j6S7iPQQh00YFtp2G9Kt4xdWJGsxbuBjvHHZ4="; + }; + + postInstall = '' + ln -s $out/bin/jrsonnet $out/bin/jsonnet + ''; + + cargoSha256 = "sha256-KGQ3n3BBgLCT3ITIM8p9AxNa62ek4GHymqoD0eQSVKQ="; + + meta = { + description = "Purely-functional configuration language that helps you define JSON data"; + maintainers = with lib.maintainers; [ lach ]; + license = lib.licenses.mit; + homepage = "https://github.com/CertainLach/jrsonnet"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/compilers/koka/default.nix b/third_party/nixpkgs/pkgs/development/compilers/koka/default.nix index 6523dcca2f..30e273271a 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/koka/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/koka/default.nix @@ -4,12 +4,12 @@ , parsec, process, regex-compat, text, time }: let - version = "2.1.1"; + version = "2.1.4"; src = fetchFromGitHub { owner = "koka-lang"; repo = "koka"; rev = "v${version}"; - sha256 = "sha256-cq+dljfTKJh5NgwQfxQQP9jRcg2PQxxBVEgQ59ll36o="; + sha256 = "sha256-MPMA8ZErEKv1SrkliLsy35k88GrdsPqIK6yokQreIjE="; fetchSubmodules = true; }; kklib = stdenv.mkDerivation { diff --git a/third_party/nixpkgs/pkgs/development/compilers/kotlin/default.nix b/third_party/nixpkgs/pkgs/development/compilers/kotlin/default.nix index 5fdf58e56f..07d90f9e01 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/kotlin/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/kotlin/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "kotlin"; - version = "1.5.0"; + version = "1.5.20"; src = fetchurl { url = "https://github.com/JetBrains/kotlin/releases/download/v${version}/kotlin-compiler-${version}.zip"; - sha256 = "1dyiis96skflhlsmc8byp5j8j3vsicmlslwyrkn1pv4gc8gzqhq3"; + sha256 = "12wa7blf7l4360rfm8fk5x36ij0x1m61wrjrxkvligdavmil5wzd"; }; propagatedBuildInputs = [ jre ] ; @@ -37,8 +37,7 @@ stdenv.mkDerivation rec { ''; homepage = "https://kotlinlang.org/"; license = lib.licenses.asl20; - maintainers = with lib.maintainers; - [ ]; + maintainers = with lib.maintainers; [ SubhrajyotiSen ]; platforms = lib.platforms.all; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/10/clang/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/10/clang/default.nix index e0c52651ca..b42f40b969 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/10/clang/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/10/clang/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, llvm_meta, fetch, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 +{ lib, stdenv, llvm_meta, fetch, substituteAll, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 , buildLlvmTools , fixDarwinDylibNames , enableManpages ? false @@ -46,6 +46,10 @@ let # https://reviews.llvm.org/D51899 ./compiler-rt-baremetal.patch ./gnu-install-dirs.patch + (substituteAll { + src = ../../clang-6-10-LLVMgold-path.patch; + libllvmLibdir = "${libllvm.lib}/lib"; + }) ]; postPatch = '' @@ -64,12 +68,7 @@ let outputs = [ "out" "lib" "dev" "python" ]; - # Clang expects to find LLVMgold in its own prefix postInstall = '' - if [ -e ${libllvm.lib}/lib/LLVMgold.so ]; then - ln -sv ${libllvm.lib}/lib/LLVMgold.so $lib/lib - fi - ln -sv $out/bin/clang $out/bin/cpp # Move libclang to 'lib' output diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/10/compiler-rt/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/10/compiler-rt/default.nix index 37c7e0599b..c48e2a8433 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/10/compiler-rt/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/10/compiler-rt/default.nix @@ -104,5 +104,6 @@ stdenv.mkDerivation { # "All of the code in the compiler-rt project is dual licensed under the MIT # license and the UIUC License (a BSD-like license)": license = with lib.licenses; [ mit ncsa ]; + broken = stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isAarch64; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/10/lldb/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/10/lldb/default.nix index 04b9e06e77..a762151a58 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/10/lldb/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/10/lldb/default.nix @@ -13,6 +13,7 @@ , version , darwin , lit +, makeWrapper , enableManpages ? false }: @@ -30,7 +31,7 @@ stdenv.mkDerivation (rec { outputs = [ "out" "lib" "dev" ]; nativeBuildInputs = [ - cmake python3 which swig lit + cmake python3 which swig lit makeWrapper ] ++ lib.optionals enableManpages [ python3.pkgs.sphinx python3.pkgs.recommonmark ]; @@ -68,7 +69,15 @@ stdenv.mkDerivation (rec { doCheck = false; + installCheckPhase = '' + if [ ! -e "$lib/${python3.sitePackages}/lldb/_lldb.so" ] ; then + return 1; + fi + ''; + postInstall = '' + wrapProgram $out/bin/lldb --prefix PYTHONPATH : $lib/${python3.sitePackages}/ + # Editor support # vscode: install -D ../tools/lldb-vscode/package.json $out/share/vscode/extensions/llvm-org.lldb-vscode-0.1.0/package.json diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/10/lldb/gnu-install-dirs.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/10/lldb/gnu-install-dirs.patch index 053a580e45..0a7539db5e 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/10/lldb/gnu-install-dirs.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/10/lldb/gnu-install-dirs.patch @@ -63,3 +63,29 @@ index aff75d7db334..98a527c5e761 100644 install(TARGETS lldbIntelFeatures - LIBRARY DESTINATION lib${LLVM_LIBDIR_SUFFIX}) + LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) +diff --git a/cmake/modules/LLDBStandalone.cmake b/cmake/modules/LLDBStandalone.cmake +index 752113b..010f187 100644 +--- a/cmake/modules/LLDBStandalone.cmake ++++ b/cmake/modules/LLDBStandalone.cmake +@@ -62,7 +62,7 @@ endif() + + # They are used as destination of target generators. + set(LLVM_RUNTIME_OUTPUT_INTDIR ${CMAKE_BINARY_DIR}/${CMAKE_CFG_INTDIR}/bin) +-set(LLVM_LIBRARY_OUTPUT_INTDIR ${CMAKE_BINARY_DIR}/${CMAKE_CFG_INTDIR}/lib${LLVM_LIBDIR_SUFFIX}) ++set(LLVM_LIBRARY_OUTPUT_INTDIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) + if(WIN32 OR CYGWIN) + # DLL platform -- put DLLs into bin. + set(LLVM_SHLIB_OUTPUT_INTDIR ${LLVM_RUNTIME_OUTPUT_INTDIR}) +diff --git a/CMakeLists.txt b/CMakeLists.txt +index bf74802..1c98cae 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -222,7 +222,7 @@ if (LLDB_ENABLE_PYTHON) + if(LLDB_BUILD_FRAMEWORK) + set(LLDB_PYTHON_INSTALL_PATH ${LLDB_FRAMEWORK_INSTALL_DIR}/LLDB.framework/Resources/Python) + else() +- set(LLDB_PYTHON_INSTALL_PATH ${LLDB_PYTHON_RELATIVE_PATH}) ++ set(LLDB_PYTHON_INSTALL_PATH ${CMAKE_INSTALL_LIBDIR}/../${LLDB_PYTHON_RELATIVE_PATH}) + endif() + if (NOT CMAKE_CFG_INTDIR STREQUAL ".") + string(REPLACE ${CMAKE_CFG_INTDIR} "\$\{CMAKE_INSTALL_CONFIG_NAME\}" LLDB_PYTHON_INSTALL_PATH ${LLDB_PYTHON_INSTALL_PATH}) diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/11/clang/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/11/clang/default.nix index 74078c1ac6..9eed5269da 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/11/clang/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/11/clang/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, llvm_meta, fetch, fetchpatch, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 +{ lib, stdenv, llvm_meta, fetch, fetchpatch, substituteAll, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 , buildLlvmTools , fixDarwinDylibNames , enableManpages ? false @@ -62,6 +62,10 @@ let excludes = [ "docs/*" "test/*" ]; sha256 = "0gxgmi0qbm89mq911dahallhi8m6wa9vpklklqmxafx4rplrr8ph"; }) + (substituteAll { + src = ../../clang-11-12-LLVMgold-path.patch; + libllvmLibdir = "${libllvm.lib}/lib"; + }) ]; postPatch = '' @@ -80,12 +84,7 @@ let outputs = [ "out" "lib" "dev" "python" ]; - # Clang expects to find LLVMgold in its own prefix postInstall = '' - if [ -e ${libllvm.lib}/lib/LLVMgold.so ]; then - ln -sv ${libllvm.lib}/lib/LLVMgold.so $lib/lib - fi - ln -sv $out/bin/clang $out/bin/cpp # Move libclang to 'lib' output diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/11/lldb/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/11/lldb/default.nix index 785ac4671e..46d6c6628e 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/11/lldb/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/11/lldb/default.nix @@ -13,6 +13,7 @@ , version , darwin , lit +, makeWrapper , enableManpages ? false }: @@ -30,7 +31,7 @@ stdenv.mkDerivation (rec { outputs = [ "out" "lib" "dev" ]; nativeBuildInputs = [ - cmake python3 which swig lit + cmake python3 which swig lit makeWrapper ] ++ lib.optionals enableManpages [ python3.pkgs.sphinx python3.pkgs.recommonmark ]; @@ -68,7 +69,15 @@ stdenv.mkDerivation (rec { doCheck = false; + installCheckPhase = '' + if [ ! -e "$lib/${python3.sitePackages}/lldb/_lldb.so" ] ; then + return 1; + fi + ''; + postInstall = '' + wrapProgram $out/bin/lldb --prefix PYTHONPATH : $lib/${python3.sitePackages}/ + # Editor support # vscode: install -D ../tools/lldb-vscode/package.json $out/share/vscode/extensions/llvm-org.lldb-vscode-0.1.0/package.json diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/11/lldb/gnu-install-dirs.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/11/lldb/gnu-install-dirs.patch index a476910952..fd49be395a 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/11/lldb/gnu-install-dirs.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/11/lldb/gnu-install-dirs.patch @@ -63,3 +63,29 @@ index efba2f74904f..e08413b1dbb1 100644 install(TARGETS lldbIntelFeatures - LIBRARY DESTINATION lib${LLVM_LIBDIR_SUFFIX}) + LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) +diff --git a/cmake/modules/LLDBStandalone.cmake b/cmake/modules/LLDBStandalone.cmake +index 752113b..010f187 100644 +--- a/cmake/modules/LLDBStandalone.cmake ++++ b/cmake/modules/LLDBStandalone.cmake +@@ -62,7 +62,7 @@ endif() + + # They are used as destination of target generators. + set(LLVM_RUNTIME_OUTPUT_INTDIR ${CMAKE_BINARY_DIR}/${CMAKE_CFG_INTDIR}/bin) +-set(LLVM_LIBRARY_OUTPUT_INTDIR ${CMAKE_BINARY_DIR}/${CMAKE_CFG_INTDIR}/lib${LLVM_LIBDIR_SUFFIX}) ++set(LLVM_LIBRARY_OUTPUT_INTDIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) + if(WIN32 OR CYGWIN) + # DLL platform -- put DLLs into bin. + set(LLVM_SHLIB_OUTPUT_INTDIR ${LLVM_RUNTIME_OUTPUT_INTDIR}) +diff --git a/CMakeLists.txt b/CMakeLists.txt +index bf74802..1c98cae 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -222,7 +222,7 @@ if (LLDB_ENABLE_PYTHON) + if(LLDB_BUILD_FRAMEWORK) + set(LLDB_PYTHON_INSTALL_PATH ${LLDB_FRAMEWORK_INSTALL_DIR}/LLDB.framework/Resources/Python) + else() +- set(LLDB_PYTHON_INSTALL_PATH ${LLDB_PYTHON_RELATIVE_PATH}) ++ set(LLDB_PYTHON_INSTALL_PATH ${CMAKE_INSTALL_LIBDIR}/../${LLDB_PYTHON_RELATIVE_PATH}) + endif() + if (NOT CMAKE_CFG_INTDIR STREQUAL ".") + string(REPLACE ${CMAKE_CFG_INTDIR} "\$\{CMAKE_INSTALL_CONFIG_NAME\}" LLDB_PYTHON_INSTALL_PATH ${LLDB_PYTHON_INSTALL_PATH}) diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/clang/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/clang/default.nix index 3d1106dbc5..dbd6ea1e1a 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/clang/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/clang/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, llvm_meta, fetch, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 +{ lib, stdenv, llvm_meta, fetch, substituteAll, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 , buildLlvmTools , fixDarwinDylibNames , enableManpages ? false @@ -44,6 +44,10 @@ let ./purity.patch # https://reviews.llvm.org/D51899 ./gnu-install-dirs.patch + (substituteAll { + src = ../../clang-11-12-LLVMgold-path.patch; + libllvmLibdir = "${libllvm.lib}/lib"; + }) ]; postPatch = '' @@ -59,12 +63,7 @@ let outputs = [ "out" "lib" "dev" "python" ]; - # Clang expects to find LLVMgold in its own prefix postInstall = '' - if [ -e ${libllvm.lib}/lib/LLVMgold.so ]; then - ln -sv ${libllvm.lib}/lib/LLVMgold.so $lib/lib - fi - ln -sv $out/bin/clang $out/bin/cpp # Move libclang to 'lib' output diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/compiler-rt/darwin-targetconditionals.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/compiler-rt/darwin-targetconditionals.patch new file mode 100644 index 0000000000..425dc2af01 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/compiler-rt/darwin-targetconditionals.patch @@ -0,0 +1,71 @@ +diff --git a/lib/sanitizer_common/sanitizer_mac.cpp b/lib/sanitizer_common/sanitizer_mac.cpp +--- a/lib/sanitizer_common/sanitizer_mac.cpp ++++ b/lib/sanitizer_common/sanitizer_mac.cpp +@@ -613,9 +613,15 @@ HandleSignalMode GetHandleSignalMode(int signum) { + // Offset example: + // XNU 17 -- macOS 10.13 -- iOS 11 -- tvOS 11 -- watchOS 4 + constexpr u16 GetOSMajorKernelOffset() { +- if (TARGET_OS_OSX) return 4; +- if (TARGET_OS_IOS || TARGET_OS_TV) return 6; +- if (TARGET_OS_WATCH) return 13; ++#if TARGET_OS_OSX ++ return 4; ++#endif ++#if TARGET_OS_IOS || TARGET_OS_TV ++ return 6; ++#endif ++#if TARGET_OS_WATCH ++ return 13; ++#endif + } + + using VersStr = char[64]; +@@ -627,13 +633,13 @@ static uptr ApproximateOSVersionViaKernelVersion(VersStr vers) { + u16 os_major = kernel_major - offset; + + const char *format = "%d.0"; +- if (TARGET_OS_OSX) { +- if (os_major >= 16) { // macOS 11+ +- os_major -= 5; +- } else { // macOS 10.15 and below +- format = "10.%d"; +- } ++#if TARGET_OS_OSX ++ if (os_major >= 16) { // macOS 11+ ++ os_major -= 5; ++ } else { // macOS 10.15 and below ++ format = "10.%d"; + } ++#endif + return internal_snprintf(vers, sizeof(VersStr), format, os_major); + } + +@@ -681,15 +687,14 @@ void ParseVersion(const char *vers, u16 *major, u16 *minor) { + // Aligned versions example: + // macOS 10.15 -- iOS 13 -- tvOS 13 -- watchOS 6 + static void MapToMacos(u16 *major, u16 *minor) { +- if (TARGET_OS_OSX) +- return; +- +- if (TARGET_OS_IOS || TARGET_OS_TV) ++#if !TARGET_OS_OSX ++#if TARGET_OS_IOS || TARGET_OS_TV + *major += 2; +- else if (TARGET_OS_WATCH) ++#elif TARGET_OS_WATCH + *major += 9; +- else ++#else + UNREACHABLE("unsupported platform"); ++#endif + + if (*major >= 16) { // macOS 11+ + *major -= 5; +@@ -697,6 +702,7 @@ static void MapToMacos(u16 *major, u16 *minor) { + *minor = *major; + *major = 10; + } ++#endif + } + + static MacosVersion GetMacosAlignedVersionInternal() { diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/compiler-rt/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/compiler-rt/default.nix index 895af8f2f0..cde1317ca3 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/compiler-rt/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/compiler-rt/default.nix @@ -59,6 +59,8 @@ stdenv.mkDerivation { # extra `/`. ./normalize-var.patch ]# ++ lib.optional stdenv.hostPlatform.isMusl ./sanitizers-nongnu.patch + # Prevent a compilation error on darwin + ++ lib.optional stdenv.hostPlatform.isDarwin ./darwin-targetconditionals.patch ++ lib.optional stdenv.hostPlatform.isAarch32 ./armv7l.patch; # TSAN requires XPC on Darwin, which we have no public/free source files for. We can depend on the Apple frameworks diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/lldb/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/lldb/default.nix index 07517308b4..0712396ccc 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/lldb/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/lldb/default.nix @@ -19,6 +19,7 @@ , Carbon , Cocoa , lit +, makeWrapper , enableManpages ? false }: @@ -41,7 +42,7 @@ stdenv.mkDerivation (rec { outputs = [ "out" "lib" "dev" ]; nativeBuildInputs = [ - cmake python3 which swig lit + cmake python3 which swig lit makeWrapper ] ++ lib.optionals enableManpages [ python3.pkgs.sphinx python3.pkgs.recommonmark ]; @@ -84,7 +85,15 @@ stdenv.mkDerivation (rec { doCheck = false; + installCheckPhase = '' + if [ ! -e "$lib/${python3.sitePackages}/lldb/_lldb.so" ] ; then + return 1; + fi + ''; + postInstall = '' + wrapProgram $out/bin/lldb --prefix PYTHONPATH : $lib/${python3.sitePackages}/ + # Editor support # vscode: install -D ../tools/lldb-vscode/package.json $out/share/vscode/extensions/llvm-org.lldb-vscode-0.1.0/package.json diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/lldb/gnu-install-dirs.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/lldb/gnu-install-dirs.patch index 98321f4479..afc945ce26 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/lldb/gnu-install-dirs.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/lldb/gnu-install-dirs.patch @@ -63,3 +63,29 @@ index 734167e51bc5..f95761b5df58 100644 install(TARGETS lldbIntelFeatures - LIBRARY DESTINATION lib${LLVM_LIBDIR_SUFFIX}) + LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) +diff --git a/cmake/modules/LLDBStandalone.cmake b/cmake/modules/LLDBStandalone.cmake +index 752113b..010f187 100644 +--- a/cmake/modules/LLDBStandalone.cmake ++++ b/cmake/modules/LLDBStandalone.cmake +@@ -62,7 +62,7 @@ endif() + + # They are used as destination of target generators. + set(LLVM_RUNTIME_OUTPUT_INTDIR ${CMAKE_BINARY_DIR}/${CMAKE_CFG_INTDIR}/bin) +-set(LLVM_LIBRARY_OUTPUT_INTDIR ${CMAKE_BINARY_DIR}/${CMAKE_CFG_INTDIR}/lib${LLVM_LIBDIR_SUFFIX}) ++set(LLVM_LIBRARY_OUTPUT_INTDIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) + if(WIN32 OR CYGWIN) + # DLL platform -- put DLLs into bin. + set(LLVM_SHLIB_OUTPUT_INTDIR ${LLVM_RUNTIME_OUTPUT_INTDIR}) +diff --git a/CMakeLists.txt b/CMakeLists.txt +index b5633e2..86e4738 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -79,7 +79,7 @@ if (LLDB_ENABLE_PYTHON) + if(LLDB_BUILD_FRAMEWORK) + set(lldb_python_target_dir "${LLDB_FRAMEWORK_ABSOLUTE_BUILD_DIR}/LLDB.framework/Resources/Python/lldb") + else() +- set(lldb_python_target_dir "${CMAKE_BINARY_DIR}/${CMAKE_CFG_INTDIR}/${LLDB_PYTHON_RELATIVE_PATH}/lldb") ++ set(lldb_python_target_dir "${CMAKE_INSTALL_LIBDIR}/../${LLDB_PYTHON_RELATIVE_PATH}/lldb") + endif() + get_target_property(lldb_python_bindings_dir swig_wrapper_python BINARY_DIR) + finish_swig_python("lldb-python" "${lldb_python_bindings_dir}" "${lldb_python_target_dir}") diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/llvm/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/llvm/default.nix index d2365745b9..8413f0f574 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/12/llvm/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/12/llvm/default.nix @@ -96,6 +96,7 @@ in stdenv.mkDerivation (rec { rm test/DebugInfo/X86/convert-debugloc.ll rm test/DebugInfo/X86/convert-inlined.ll rm test/DebugInfo/X86/convert-linked.ll + rm test/DebugInfo/X86/vla-multi.ll rm test/tools/dsymutil/X86/op-convert.test '' + optionalString (stdenv.hostPlatform.system == "armv6l-linux") '' # Seems to require certain floating point hardware (NEON?) diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/5/clang/LLVMgold-path.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/5/clang/LLVMgold-path.patch new file mode 100644 index 0000000000..6a09c91b51 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/5/clang/LLVMgold-path.patch @@ -0,0 +1,14 @@ +diff --git a/lib/Driver/ToolChains/CommonArgs.cpp b/lib/Driver/ToolChains/CommonArgs.cpp +index 00bd60bc24bb..17416b0bd3c0 100644 +--- a/lib/Driver/ToolChains/CommonArgs.cpp ++++ b/lib/Driver/ToolChains/CommonArgs.cpp +@@ -376,8 +376,7 @@ void tools::AddGoldPlugin(const ToolChain &ToolChain, const ArgList &Args, + // as gold requires -plugin to come before any -plugin-opt that -Wl might + // forward. + CmdArgs.push_back("-plugin"); +- std::string Plugin = +- ToolChain.getDriver().Dir + "/../lib" CLANG_LIBDIR_SUFFIX "/LLVMgold.so"; ++ std::string Plugin = "@libllvmLibdir@" "/LLVMgold.so"; + CmdArgs.push_back(Args.MakeArgString(Plugin)); + + // Try to pass driver level flags relevant to LTO code generation down to diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/5/clang/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/5/clang/default.nix index b5887a23c6..df3d261398 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/5/clang/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/5/clang/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, llvm_meta, fetch, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 +{ lib, stdenv, llvm_meta, fetch, substituteAll, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 , buildLlvmTools , fixDarwinDylibNames , enableManpages ? false @@ -43,6 +43,10 @@ let patches = [ ./purity.patch ./gnu-install-dirs.patch + (substituteAll { + src = ./LLVMgold-path.patch; + libllvmLibdir = "${libllvm.lib}/lib"; + }) ]; postPatch = '' @@ -58,12 +62,7 @@ let outputs = [ "out" "lib" "dev" "python" ]; - # Clang expects to find LLVMgold in its own prefix postInstall = '' - if [ -e ${libllvm.lib}/lib/LLVMgold.so ]; then - ln -sv ${libllvm.lib}/lib/LLVMgold.so $lib/lib - fi - ln -sv $out/bin/clang $out/bin/cpp # Move libclang to 'lib' output diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/5/compiler-rt/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/5/compiler-rt/default.nix index a14823571e..dce7cde371 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/5/compiler-rt/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/5/compiler-rt/default.nix @@ -100,5 +100,6 @@ stdenv.mkDerivation { # "All of the code in the compiler-rt project is dual licensed under the MIT # license and the UIUC License (a BSD-like license)": license = with lib.licenses; [ mit ncsa ]; + broken = stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isAarch64; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/6/clang/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/6/clang/default.nix index eba9111d9d..ee8859c159 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/6/clang/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/6/clang/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, llvm_meta, fetch, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 +{ lib, stdenv, llvm_meta, fetch, substituteAll, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 , buildLlvmTools , fixDarwinDylibNames , enableManpages ? false @@ -43,6 +43,10 @@ let patches = [ ./purity.patch ./gnu-install-dirs.patch + (substituteAll { + src = ../../clang-6-10-LLVMgold-path.patch; + libllvmLibdir = "${libllvm.lib}/lib"; + }) ]; postPatch = '' @@ -58,12 +62,7 @@ let outputs = [ "out" "lib" "dev" "python" ]; - # Clang expects to find LLVMgold in its own prefix postInstall = '' - if [ -e ${libllvm.lib}/lib/LLVMgold.so ]; then - ln -sv ${libllvm.lib}/lib/LLVMgold.so $lib/lib - fi - ln -sv $out/bin/clang $out/bin/cpp # Move libclang to 'lib' output diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/6/compiler-rt/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/6/compiler-rt/default.nix index 0ba96e5375..d97333bc50 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/6/compiler-rt/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/6/compiler-rt/default.nix @@ -102,5 +102,6 @@ stdenv.mkDerivation { # "All of the code in the compiler-rt project is dual licensed under the MIT # license and the UIUC License (a BSD-like license)": license = with lib.licenses; [ mit ncsa ]; + broken = stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isAarch64; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/7/clang/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/7/clang/default.nix index e1b031ad35..afa1669ace 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/7/clang/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/7/clang/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, llvm_meta, fetch, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 +{ lib, stdenv, llvm_meta, fetch, substituteAll, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 , buildLlvmTools , fixDarwinDylibNames , enableManpages ? false @@ -52,6 +52,10 @@ let # needed for our bootstrapping to not interfere with C. ./unwindlib.patch ./gnu-install-dirs.patch + (substituteAll { + src = ../../clang-6-10-LLVMgold-path.patch; + libllvmLibdir = "${libllvm.lib}/lib"; + }) ]; postPatch = '' @@ -70,12 +74,7 @@ let outputs = [ "out" "lib" "dev" "python" ]; - # Clang expects to find LLVMgold in its own prefix postInstall = '' - if [ -e ${libllvm.lib}/lib/LLVMgold.so ]; then - ln -sv ${libllvm.lib}/lib/LLVMgold.so $lib/lib - fi - ln -sv $out/bin/clang $out/bin/cpp # Move libclang to 'lib' output diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/7/compiler-rt/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/7/compiler-rt/default.nix index 5f64e2f2a2..87ebc3eff0 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/7/compiler-rt/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/7/compiler-rt/default.nix @@ -105,5 +105,6 @@ stdenv.mkDerivation { # "All of the code in the compiler-rt project is dual licensed under the MIT # license and the UIUC License (a BSD-like license)": license = with lib.licenses; [ mit ncsa ]; + broken = stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isAarch64; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/8/clang/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/8/clang/default.nix index c3399dccd1..5cb7720d02 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/8/clang/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/8/clang/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, llvm_meta, fetch, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 +{ lib, stdenv, llvm_meta, fetch, substituteAll, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 , buildLlvmTools , fixDarwinDylibNames , enableManpages ? false @@ -59,6 +59,10 @@ let # make clang -xhip use $PATH to find executables ./HIP-use-PATH-8.patch ./gnu-install-dirs.patch + (substituteAll { + src = ../../clang-6-10-LLVMgold-path.patch; + libllvmLibdir = "${libllvm.lib}/lib"; + }) ]; postPatch = '' @@ -77,12 +81,7 @@ let outputs = [ "out" "lib" "dev" "python" ]; - # Clang expects to find LLVMgold in its own prefix postInstall = '' - if [ -e ${libllvm.lib}/lib/LLVMgold.so ]; then - ln -sv ${libllvm.lib}/lib/LLVMgold.so $lib/lib - fi - ln -sv $out/bin/clang $out/bin/cpp # Move libclang to 'lib' output diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/8/compiler-rt/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/8/compiler-rt/default.nix index d6d60b2415..a3ce09cba9 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/8/compiler-rt/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/8/compiler-rt/default.nix @@ -105,5 +105,6 @@ stdenv.mkDerivation { # "All of the code in the compiler-rt project is dual licensed under the MIT # license and the UIUC License (a BSD-like license)": license = with lib.licenses; [ mit ncsa ]; + broken = stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isAarch64; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/8/lldb/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/8/lldb/default.nix index ee1f678996..b6025f722e 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/8/lldb/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/8/lldb/default.nix @@ -12,6 +12,7 @@ , python3 , version , darwin +, makeWrapper }: stdenv.mkDerivation rec { @@ -37,7 +38,7 @@ stdenv.mkDerivation rec { outputs = [ "out" "lib" "dev" ]; nativeBuildInputs = [ - cmake python3 which swig + cmake python3 which swig makeWrapper ]; buildInputs = [ @@ -61,7 +62,15 @@ stdenv.mkDerivation rec { doCheck = false; + installCheckPhase = '' + if [ ! -e "$lib/${python3.sitePackages}/lldb/_lldb.so" ] ; then + return 1; + fi + ''; + postInstall = '' + wrapProgram $out/bin/lldb --prefix PYTHONPATH : $lib/${python3.sitePackages}/ + mkdir -p $out/share/man/man1 cp ../docs/lldb.1 $out/share/man/man1/ diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/8/lldb/gnu-install-dirs.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/8/lldb/gnu-install-dirs.patch index b2e79086be..08b6fae654 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/8/lldb/gnu-install-dirs.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/8/lldb/gnu-install-dirs.patch @@ -79,3 +79,42 @@ index b5316540fdf3..3c3c882d503f 100644 install(TARGETS lldbIntelFeatures - LIBRARY DESTINATION lib${LLVM_LIBDIR_SUFFIX}) + LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) +diff --git a/CMakeLists.txt b/CMakeLists.txt +index cdf22c4..d56fc6a 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -146,7 +146,7 @@ if (NOT LLDB_DISABLE_PYTHON) + --cfgBldDir=${lldb_scripts_dir} + --prefix=${CMAKE_BINARY_DIR} + --cmakeBuildConfiguration=${CMAKE_CFG_INTDIR} +- --lldbLibDir=lib${LLVM_LIBDIR_SUFFIX} ++ --lldbLibDir=${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX} + ${use_python_wrapper_from_src_dir} + ${use_six_py_from_system} + VERBATIM +diff --git a/cmake/modules/LLDBStandalone.cmake b/cmake/modules/LLDBStandalone.cmake +index a9059dd..d76a47d 100644 +--- a/cmake/modules/LLDBStandalone.cmake ++++ b/cmake/modules/LLDBStandalone.cmake +@@ -124,7 +124,7 @@ if (CMAKE_SOURCE_DIR STREQUAL CMAKE_CURRENT_SOURCE_DIR) + link_directories("${LLVM_LIBRARY_DIR}") + + set(CMAKE_RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin) +- set(CMAKE_LIBRARY_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/lib${LLVM_LIBDIR_SUFFIX}) ++ set(CMAKE_LIBRARY_OUTPUT_DIRECTORY ${CMAKE_INSTALL_LIBDIR}/lib${LLVM_LIBDIR_SUFFIX}) + set(CMAKE_ARCHIVE_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/lib${LLVM_LIBDIR_SUFFIX}) + + set(LLDB_BUILT_STANDALONE 1) +diff --git a/scripts/CMakeLists.txt b/scripts/CMakeLists.txt +index 3598247..bd60451 100644 +--- a/scripts/CMakeLists.txt ++++ b/scripts/CMakeLists.txt +@@ -47,7 +47,7 @@ if(NOT LLDB_BUILD_FRAMEWORK) + endif() + + set(SWIG_PYTHON_DIR ${LLVM_LIBRARY_OUTPUT_INTDIR}/${swig_python_subdir}) +- set(SWIG_INSTALL_DIR lib${LLVM_LIBDIR_SUFFIX}) ++ set(SWIG_INSTALL_DIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) + + # Install the LLDB python module + install(DIRECTORY ${SWIG_PYTHON_DIR} DESTINATION ${SWIG_INSTALL_DIR}) diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/9/clang/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/9/clang/default.nix index 700fcb414f..c98b4a830c 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/9/clang/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/9/clang/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, llvm_meta, fetch, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 +{ lib, stdenv, llvm_meta, fetch, substituteAll, cmake, libxml2, libllvm, version, clang-tools-extra_src, python3 , buildLlvmTools , fixDarwinDylibNames , enableManpages ? false @@ -52,6 +52,10 @@ let # make clang -xhip use $PATH to find executables ./HIP-use-PATH-9.patch ./gnu-install-dirs.patch + (substituteAll { + src = ../../clang-6-10-LLVMgold-path.patch; + libllvmLibdir = "${libllvm.lib}/lib"; + }) ]; postPatch = '' @@ -70,12 +74,7 @@ let outputs = [ "out" "lib" "dev" "python" ]; - # Clang expects to find LLVMgold in its own prefix postInstall = '' - if [ -e ${libllvm.lib}/lib/LLVMgold.so ]; then - ln -sv ${libllvm.lib}/lib/LLVMgold.so $lib/lib - fi - ln -sv $out/bin/clang $out/bin/cpp # Move libclang to 'lib' output diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/9/compiler-rt/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/9/compiler-rt/default.nix index c31ce78ea0..a3db5c0ad6 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/9/compiler-rt/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/9/compiler-rt/default.nix @@ -104,5 +104,6 @@ stdenv.mkDerivation { # "All of the code in the compiler-rt project is dual licensed under the MIT # license and the UIUC License (a BSD-like license)": license = with lib.licenses; [ mit ncsa ]; + broken = stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isAarch64; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/9/lldb/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/9/lldb/default.nix index 9957a0218d..63edc60828 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/9/lldb/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/9/lldb/default.nix @@ -12,6 +12,7 @@ , python3 , version , darwin +, makeWrapper , lit }: @@ -29,7 +30,7 @@ stdenv.mkDerivation rec { outputs = [ "out" "lib" "dev" ]; nativeBuildInputs = [ - cmake python3 which swig lit + cmake python3 which swig lit makeWrapper ]; buildInputs = [ @@ -58,7 +59,15 @@ stdenv.mkDerivation rec { doCheck = false; + installCheckPhase = '' + if [ ! -e "$lib/${python3.sitePackages}/lldb/_lldb.so" ] ; then + return 1; + fi + ''; + postInstall = '' + wrapProgram $out/bin/lldb --prefix PYTHONPATH : $lib/${python3.sitePackages}/ + # man page mkdir -p $out/share/man/man1 install ../docs/lldb.1 -t $out/share/man/man1/ diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/9/lldb/gnu-install-dirs.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/9/lldb/gnu-install-dirs.patch index cb4e400b36..6ceb29ced9 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/9/lldb/gnu-install-dirs.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/9/lldb/gnu-install-dirs.patch @@ -63,3 +63,43 @@ index b5316540fdf3..3c3c882d503f 100644 install(TARGETS lldbIntelFeatures - LIBRARY DESTINATION lib${LLVM_LIBDIR_SUFFIX}) + LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) +diff --git a/CMakeLists.txt b/CMakeLists.txt +index cdf22c4..d56fc6a 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -146,7 +146,7 @@ if (NOT LLDB_DISABLE_PYTHON) + --cfgBldDir=${lldb_scripts_dir} + --prefix=${CMAKE_BINARY_DIR} + --cmakeBuildConfiguration=${CMAKE_CFG_INTDIR} +- --lldbLibDir=lib${LLVM_LIBDIR_SUFFIX} ++ --lldbLibDir=${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX} + ${use_python_wrapper_from_src_dir} + ${use_six_py_from_system} + VERBATIM +diff --git a/cmake/modules/LLDBStandalone.cmake b/cmake/modules/LLDBStandalone.cmake +index b726797..1f057ac 100644 +--- a/cmake/modules/LLDBStandalone.cmake ++++ b/cmake/modules/LLDBStandalone.cmake +@@ -95,7 +95,7 @@ include_directories( + "${CLANG_INCLUDE_DIRS}") + + set(CMAKE_RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin) +-set(CMAKE_LIBRARY_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/lib${LLVM_LIBDIR_SUFFIX}) ++set(CMAKE_LIBRARY_OUTPUT_DIRECTORY ${CMAKE_INSTALL_LIBDIR}/lib${LLVM_LIBDIR_SUFFIX}) + set(CMAKE_ARCHIVE_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/lib${LLVM_LIBDIR_SUFFIX}) + + set(LLDB_BUILT_STANDALONE 1) +diff --git a/scripts/CMakeLists.txt b/scripts/CMakeLists.txt +index 7de7973..b70aecc 100644 +--- a/scripts/CMakeLists.txt ++++ b/scripts/CMakeLists.txt +@@ -50,7 +50,8 @@ if(NOT LLDB_BUILD_FRAMEWORK) + OUTPUT_STRIP_TRAILING_WHITESPACE) + execute_process( + COMMAND ${PYTHON_EXECUTABLE} +- -c "import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(True, False, ''))" ++ -c "import distutils.sysconfig, sys; print(distutils.sysconfig.get_python_lib(True, False, sys.argv[1]))" ++ ${CMAKE_INSTALL_LIBDIR}/../ + OUTPUT_VARIABLE SWIG_INSTALL_DIR + OUTPUT_STRIP_TRAILING_WHITESPACE) + diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/clang-11-12-LLVMgold-path.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/clang-11-12-LLVMgold-path.patch new file mode 100644 index 0000000000..8f8991976f --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/clang-11-12-LLVMgold-path.patch @@ -0,0 +1,13 @@ +diff --git a/lib/Driver/ToolChains/CommonArgs.cpp b/lib/Driver/ToolChains/CommonArgs.cpp +index 6b6e276b8ce7..7896542a1202 100644 +--- a/lib/Driver/ToolChains/CommonArgs.cpp ++++ b/lib/Driver/ToolChains/CommonArgs.cpp +@@ -409,7 +409,7 @@ void tools::addLTOOptions(const ToolChain &ToolChain, const ArgList &Args, + + SmallString<1024> Plugin; + llvm::sys::path::native( +- Twine(D.Dir) + "/../lib" CLANG_LIBDIR_SUFFIX "/LLVMgold" + Suffix, ++ Twine("@libllvmLibdir@" "/LLVMgold") + Suffix, + Plugin); + CmdArgs.push_back(Args.MakeArgString(Plugin)); + } diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/clang-6-10-LLVMgold-path.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/clang-6-10-LLVMgold-path.patch new file mode 100644 index 0000000000..93504316ed --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/clang-6-10-LLVMgold-path.patch @@ -0,0 +1,15 @@ +diff --git a/lib/Driver/ToolChains/CommonArgs.cpp b/lib/Driver/ToolChains/CommonArgs.cpp +index 37ec73468570..b73e75aa6e59 100644 +--- a/lib/Driver/ToolChains/CommonArgs.cpp ++++ b/lib/Driver/ToolChains/CommonArgs.cpp +@@ -370,8 +370,8 @@ void tools::AddGoldPlugin(const ToolChain &ToolChain, const ArgList &Args, + #endif + + SmallString<1024> Plugin; +- llvm::sys::path::native(Twine(ToolChain.getDriver().Dir) + +- "/../lib" CLANG_LIBDIR_SUFFIX "/LLVMgold" + ++ llvm::sys::path::native(Twine("@libllvmLibdir@" ++ "/LLVMgold") + + Suffix, + Plugin); + CmdArgs.push_back(Args.MakeArgString(Plugin)); diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/default.nix index 38de0f70cf..ef65827fbf 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/default.nix @@ -18,18 +18,19 @@ }: let - release_version = "12.0.0"; + release_version = "13.0.0"; candidate = ""; # empty or "rcN" dash-candidate = lib.optionalString (candidate != "") "-${candidate}"; - rev = ""; # When using a Git commit - version = "${release_version}${dash-candidate}"; # differentiating these (variables) is important for RCs + rev = "1605fce6c3074f8d1dff5a917a1840ffa66abd86"; # When using a Git commit + rev-version = "unstable-2021-06-19"; # When using a Git commit + version = if rev != "" then rev-version else "${release_version}${dash-candidate}"; targetConfig = stdenv.targetPlatform.config; src = fetchFromGitHub { owner = "llvm"; repo = "llvm-project"; rev = if rev != "" then rev else "llvmorg-${version}"; - sha256 = "07jz8pywc2qqa1srdnqg5p2y4lx3ki1inpigarzgxc3j20r4gb58"; + sha256 = "1jf0b9vn4qv5gsvhyg6xsqdkdl4vzn7j4sfcldl8bggcgjmzp0q1"; }; llvm_meta = { @@ -256,9 +257,7 @@ let libunwind = callPackage ./libunwind { inherit llvm_meta; - stdenv = if stdenv.hostPlatform.useLLVM or false - then overrideCC stdenv buildLlvmTools.clangNoLibcxx - else stdenv; + stdenv = overrideCC stdenv buildLlvmTools.clangNoLibcxx; }; openmp = callPackage ./openmp { diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxx/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxx/default.nix index 8fb6b4a7db..f511eba81d 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxx/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxx/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, llvm_meta, src, cmake, python3, libcxxabi, fixDarwinDylibNames, version +{ lib, stdenv, llvm_meta, src, cmake, python3, fixDarwinDylibNames, version , enableShared ? !stdenv.hostPlatform.isStatic }: @@ -24,10 +24,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake python3 ] ++ lib.optional stdenv.isDarwin fixDarwinDylibNames; - buildInputs = [ libcxxabi ]; - cmakeFlags = [ - "-DLIBCXX_CXX_ABI=libcxxabi" ] ++ lib.optional (stdenv.hostPlatform.isMusl || stdenv.hostPlatform.isWasi) "-DLIBCXX_HAS_MUSL_LIBC=1" ++ lib.optional (stdenv.hostPlatform.useLLVM or false) "-DLIBCXX_USE_COMPILER_RT=ON" ++ lib.optional stdenv.hostPlatform.isWasm [ diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxx/gnu-install-dirs.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxx/gnu-install-dirs.patch index 1f9de00a9d..f59d7f8dfa 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxx/gnu-install-dirs.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxx/gnu-install-dirs.patch @@ -1,5 +1,5 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt -index 9bf1a02f0908..612cd4aab76c 100644 +index 06ee1d74a03e..6c3c6f8f8d47 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -28,6 +28,8 @@ set(LIBCXX_BINARY_INCLUDE_DIR "${LIBCXX_BINARY_DIR}/include/c++build") @@ -9,92 +9,73 @@ index 9bf1a02f0908..612cd4aab76c 100644 + include(GNUInstallDirs) + set(PACKAGE_NAME libcxx) - set(PACKAGE_VERSION 12.0.0) + set(PACKAGE_VERSION 13.0.0git) set(PACKAGE_STRING "${PACKAGE_NAME} ${PACKAGE_VERSION}") -@@ -402,7 +404,7 @@ endif () - if(LLVM_ENABLE_PER_TARGET_RUNTIME_DIR AND NOT APPLE) - set(LIBCXX_LIBRARY_DIR ${LLVM_LIBRARY_OUTPUT_INTDIR}/${LLVM_DEFAULT_TARGET_TRIPLE}/c++) - set(LIBCXX_HEADER_DIR ${LLVM_BINARY_DIR}) -- set(LIBCXX_INSTALL_LIBRARY_DIR lib${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}/c++) -+ set(LIBCXX_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}/c++) +@@ -409,7 +411,7 @@ if(LLVM_ENABLE_PER_TARGET_RUNTIME_DIR AND NOT APPLE) + set(LIBCXX_LIBRARY_DIR ${LLVM_LIBRARY_OUTPUT_INTDIR}/${LLVM_DEFAULT_TARGET_TRIPLE}) + set(LIBCXX_GENERATED_INCLUDE_DIR "${LLVM_BINARY_DIR}/include/c++/v1") + set(LIBCXX_GENERATED_INCLUDE_TARGET_DIR "${LLVM_BINARY_DIR}/include/${LLVM_DEFAULT_TARGET_TRIPLE}/c++/v1") +- set(LIBCXX_INSTALL_LIBRARY_DIR lib${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}) ++ set(LIBCXX_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}) + set(LIBCXX_INSTALL_INCLUDE_DIR "include/c++/v1") + set(LIBCXX_INSTALL_INCLUDE_TARGET_DIR "include/${LLVM_DEFAULT_TARGET_TRIPLE}/c++/v1") if(LIBCXX_LIBDIR_SUBDIR) - string(APPEND LIBCXX_LIBRARY_DIR /${LIBCXX_LIBDIR_SUBDIR}) - string(APPEND LIBCXX_INSTALL_LIBRARY_DIR /${LIBCXX_LIBDIR_SUBDIR}) -@@ -410,11 +412,11 @@ if(LLVM_ENABLE_PER_TARGET_RUNTIME_DIR AND NOT APPLE) - elseif(LLVM_LIBRARY_OUTPUT_INTDIR) +@@ -420,14 +422,14 @@ elseif(LLVM_LIBRARY_OUTPUT_INTDIR) set(LIBCXX_LIBRARY_DIR ${LLVM_LIBRARY_OUTPUT_INTDIR}) - set(LIBCXX_HEADER_DIR ${LLVM_BINARY_DIR}) + set(LIBCXX_GENERATED_INCLUDE_DIR "${LLVM_BINARY_DIR}/include/c++/v1") + set(LIBCXX_GENERATED_INCLUDE_TARGET_DIR "${LIBCXX_GENERATED_INCLUDE_DIR}") - set(LIBCXX_INSTALL_LIBRARY_DIR lib${LIBCXX_LIBDIR_SUFFIX}) + set(LIBCXX_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LIBCXX_LIBDIR_SUFFIX}) + set(LIBCXX_INSTALL_INCLUDE_DIR "include/c++/v1") + set(LIBCXX_INSTALL_INCLUDE_TARGET_DIR "${LIBCXX_INSTALL_INCLUDE_DIR}") else() set(LIBCXX_LIBRARY_DIR ${CMAKE_BINARY_DIR}/lib${LIBCXX_LIBDIR_SUFFIX}) - set(LIBCXX_HEADER_DIR ${CMAKE_BINARY_DIR}) + set(LIBCXX_GENERATED_INCLUDE_DIR "${CMAKE_BINARY_DIR}/include/c++/v1") + set(LIBCXX_GENERATED_INCLUDE_TARGET_DIR "${LIBCXX_GENERATED_INCLUDE_DIR}") - set(LIBCXX_INSTALL_LIBRARY_DIR lib${LIBCXX_LIBDIR_SUFFIX}) + set(LIBCXX_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LIBCXX_LIBDIR_SUFFIX}) + set(LIBCXX_INSTALL_INCLUDE_DIR "include/c++/v1") + set(LIBCXX_INSTALL_INCLUDE_TARGET_DIR "${LIBCXX_INSTALL_INCLUDE_DIR}") endif() - - file(MAKE_DIRECTORY "${LIBCXX_BINARY_INCLUDE_DIR}") diff --git a/cmake/Modules/HandleLibCXXABI.cmake b/cmake/Modules/HandleLibCXXABI.cmake -index 5d2764e870e9..bb1ec5de6ca2 100644 +index 5a8a4a270a1a..c06bae0001aa 100644 --- a/cmake/Modules/HandleLibCXXABI.cmake +++ b/cmake/Modules/HandleLibCXXABI.cmake @@ -63,7 +63,7 @@ macro(setup_abi_lib abidefines abishared abistatic abifiles abidirs) if (LIBCXX_INSTALL_HEADERS) install(FILES "${LIBCXX_BINARY_INCLUDE_DIR}/${fpath}" -- DESTINATION ${LIBCXX_INSTALL_HEADER_PREFIX}include/c++/v1/${dstdir} -+ DESTINATION ${LIBCXX_INSTALL_HEADER_PREFIX}${CMAKE_INSTALL_INCLUDEDIR}/c++/v1/${dstdir} +- DESTINATION include/c++/v1/${dstdir} ++ DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}/c++/v1/${dstdir} COMPONENT cxx-headers PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ ) -diff --git a/include/CMakeLists.txt b/include/CMakeLists.txt -index 29a317b8ae9a..4747263cfd1b 100644 ---- a/include/CMakeLists.txt -+++ b/include/CMakeLists.txt -@@ -252,7 +252,7 @@ if (LIBCXX_INSTALL_HEADERS) - foreach(file ${files}) - get_filename_component(dir ${file} DIRECTORY) - install(FILES ${file} -- DESTINATION ${LIBCXX_INSTALL_HEADER_PREFIX}include/c++/v1/${dir} -+ DESTINATION ${LIBCXX_INSTALL_HEADER_PREFIX}${CMAKE_INSTALL_INCLUDEDIR}/c++/v1/${dir} - COMPONENT cxx-headers - PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ - ) -@@ -260,7 +260,7 @@ if (LIBCXX_INSTALL_HEADERS) - - # Install the generated header as __config. - install(FILES ${LIBCXX_BINARY_DIR}/__generated_config -- DESTINATION ${LIBCXX_INSTALL_HEADER_PREFIX}include/c++/v1 -+ DESTINATION ${LIBCXX_INSTALL_HEADER_PREFIX}${CMAKE_INSTALL_INCLUDEDIR}/c++/v1 - PERMISSIONS OWNER_READ OWNER_WRITE GROUP_READ WORLD_READ - RENAME __config - COMPONENT cxx-headers) diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt -index 9965104cb5b2..9b55dbb1d822 100644 +index 87b71f7ba334..d20a783079b7 100644 --- a/src/CMakeLists.txt +++ b/src/CMakeLists.txt -@@ -352,21 +352,21 @@ if (LIBCXX_INSTALL_SHARED_LIBRARY) +@@ -369,21 +369,21 @@ if (LIBCXX_INSTALL_SHARED_LIBRARY) install(TARGETS cxx_shared - ARCHIVE DESTINATION ${LIBCXX_INSTALL_PREFIX}${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx - LIBRARY DESTINATION ${LIBCXX_INSTALL_PREFIX}${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx -- RUNTIME DESTINATION ${LIBCXX_INSTALL_PREFIX}bin COMPONENT cxx) -+ RUNTIME DESTINATION ${LIBCXX_INSTALL_PREFIX}${CMAKE_INSTALL_BINDIR} COMPONENT cxx) + ARCHIVE DESTINATION ${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx + LIBRARY DESTINATION ${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx +- RUNTIME DESTINATION bin COMPONENT cxx) ++ RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR} COMPONENT cxx) endif() if (LIBCXX_INSTALL_STATIC_LIBRARY) install(TARGETS cxx_static - ARCHIVE DESTINATION ${LIBCXX_INSTALL_PREFIX}${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx - LIBRARY DESTINATION ${LIBCXX_INSTALL_PREFIX}${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx -- RUNTIME DESTINATION ${LIBCXX_INSTALL_PREFIX}bin COMPONENT cxx) -+ RUNTIME DESTINATION ${LIBCXX_INSTALL_PREFIX}${CMAKE_INSTALL_BINDIR} COMPONENT cxx) + ARCHIVE DESTINATION ${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx + LIBRARY DESTINATION ${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx +- RUNTIME DESTINATION bin COMPONENT cxx) ++ RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR} COMPONENT cxx) endif() if(LIBCXX_INSTALL_EXPERIMENTAL_LIBRARY) install(TARGETS cxx_experimental - LIBRARY DESTINATION ${LIBCXX_INSTALL_PREFIX}${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx - ARCHIVE DESTINATION ${LIBCXX_INSTALL_PREFIX}${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx -- RUNTIME DESTINATION ${LIBCXX_INSTALL_PREFIX}bin COMPONENT cxx) -+ RUNTIME DESTINATION ${LIBCXX_INSTALL_PREFIX}${CMAKE_INSTALL_BINDIR} COMPONENT cxx) + LIBRARY DESTINATION ${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx + ARCHIVE DESTINATION ${LIBCXX_INSTALL_LIBRARY_DIR} COMPONENT cxx +- RUNTIME DESTINATION bin COMPONENT cxx) ++ RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR} COMPONENT cxx) endif() # NOTE: This install command must go after the cxx install command otherwise diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxxabi/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxxabi/default.nix index 3bb82d651e..7fadc6d6dc 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxxabi/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxxabi/default.nix @@ -1,5 +1,6 @@ { lib, stdenv, llvm_meta, cmake, python3, src, libunwind, version , enableShared ? !stdenv.hostPlatform.isStatic +, libcxx }: stdenv.mkDerivation rec { @@ -26,7 +27,9 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake python3 ]; buildInputs = lib.optional (!stdenv.isDarwin && !stdenv.isFreeBSD && !stdenv.hostPlatform.isWasm) libunwind; - cmakeFlags = lib.optionals (stdenv.hostPlatform.useLLVM or false) [ + cmakeFlags = [ + "-DLIBCXXABI_LIBCXX_INCLUDES=${libcxx.dev}/include/c++/v1" + ] ++ lib.optionals (stdenv.hostPlatform.useLLVM or false) [ "-DLLVM_ENABLE_LIBCXX=ON" "-DLIBCXXABI_USE_LLVM_UNWINDER=ON" ] ++ lib.optionals stdenv.hostPlatform.isWasm [ diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxxabi/gnu-install-dirs.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxxabi/gnu-install-dirs.patch index b49b168594..45641acb0c 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxxabi/gnu-install-dirs.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libcxxabi/gnu-install-dirs.patch @@ -1,5 +1,5 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt -index 426c855288fc..a9812a994f53 100644 +index 1e8b73aa38cc..6f7b2a25d205 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -27,6 +27,8 @@ set(LIBCXXABI_LIBCXX_PATH "${CMAKE_CURRENT_LIST_DIR}/../libcxx" CACHE PATH @@ -9,26 +9,28 @@ index 426c855288fc..a9812a994f53 100644 + include(GNUInstallDirs) + set(PACKAGE_NAME libcxxabi) - set(PACKAGE_VERSION 11.0.0) + set(PACKAGE_VERSION 11.0.0git) set(PACKAGE_STRING "${PACKAGE_NAME} ${PACKAGE_VERSION}") -@@ -180,17 +182,17 @@ set(CMAKE_MODULE_PATH - +@@ -196,7 +198,7 @@ set(CMAKE_MODULE_PATH if(LLVM_ENABLE_PER_TARGET_RUNTIME_DIR AND NOT APPLE) - set(LIBCXXABI_LIBRARY_DIR ${LLVM_LIBRARY_OUTPUT_INTDIR}/${LLVM_DEFAULT_TARGET_TRIPLE}/c++) -- set(LIBCXXABI_INSTALL_LIBRARY_DIR lib${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}/c++) -+ set(LIBCXXABI_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}/c++) + set(LIBCXXABI_HEADER_DIR ${LLVM_BINARY_DIR}) + set(LIBCXXABI_LIBRARY_DIR ${LLVM_LIBRARY_OUTPUT_INTDIR}/${LLVM_DEFAULT_TARGET_TRIPLE}) +- set(LIBCXXABI_INSTALL_LIBRARY_DIR lib${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}) ++ set(LIBCXXABI_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}) if(LIBCXX_LIBDIR_SUBDIR) string(APPEND LIBCXXABI_LIBRARY_DIR /${LIBCXXABI_LIBDIR_SUBDIR}) string(APPEND LIBCXXABI_INSTALL_LIBRARY_DIR /${LIBCXXABI_LIBDIR_SUBDIR}) - endif() +@@ -204,11 +206,11 @@ if(LLVM_ENABLE_PER_TARGET_RUNTIME_DIR AND NOT APPLE) elseif(LLVM_LIBRARY_OUTPUT_INTDIR) + set(LIBCXXABI_HEADER_DIR ${LLVM_BINARY_DIR}) set(LIBCXXABI_LIBRARY_DIR ${LLVM_LIBRARY_OUTPUT_INTDIR}) - set(LIBCXXABI_INSTALL_LIBRARY_DIR lib${LIBCXXABI_LIBDIR_SUFFIX}) + set(LIBCXXABI_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LIBCXXABI_LIBDIR_SUFFIX}) else() + set(LIBCXXABI_HEADER_DIR ${CMAKE_BINARY_DIR}) set(LIBCXXABI_LIBRARY_DIR ${CMAKE_BINARY_DIR}/lib${LIBCXXABI_LIBDIR_SUFFIX}) - set(LIBCXXABI_INSTALL_LIBRARY_DIR lib${LIBCXXABI_LIBDIR_SUFFIX}) + set(LIBCXXABI_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LIBCXXABI_LIBDIR_SUFFIX}) endif() - set(LIBCXXABI_INSTALL_PREFIX "" CACHE STRING "Define libc++abi destination prefix.") + set(CMAKE_ARCHIVE_OUTPUT_DIRECTORY ${LIBCXXABI_LIBRARY_DIR}) diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libunwind/gnu-install-dirs.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libunwind/gnu-install-dirs.patch index a791d6c432..56231cd31b 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libunwind/gnu-install-dirs.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/libunwind/gnu-install-dirs.patch @@ -1,5 +1,5 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt -index 48cb8e004e08..fec8144fb95a 100644 +index a2c03fd3f8aa..98de2f8ea7c8 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -23,6 +23,8 @@ set(LIBUNWIND_LIBCXX_PATH "${CMAKE_CURRENT_LIST_DIR}/../libcxx" CACHE PATH @@ -9,14 +9,14 @@ index 48cb8e004e08..fec8144fb95a 100644 + include(GNUInstallDirs) + set(PACKAGE_NAME libunwind) - set(PACKAGE_VERSION 12.0.0) + set(PACKAGE_VERSION 13.0.0git) set(PACKAGE_STRING "${PACKAGE_NAME} ${PACKAGE_VERSION}") -@@ -115,17 +117,17 @@ set(CMAKE_MODULE_PATH +@@ -116,17 +118,17 @@ set(CMAKE_MODULE_PATH if(LLVM_ENABLE_PER_TARGET_RUNTIME_DIR AND NOT APPLE) - set(LIBUNWIND_LIBRARY_DIR ${LLVM_LIBRARY_OUTPUT_INTDIR}/${LLVM_DEFAULT_TARGET_TRIPLE}/c++) -- set(LIBUNWIND_INSTALL_LIBRARY_DIR lib${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}/c++) -+ set(LIBUNWIND_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}/c++) + set(LIBUNWIND_LIBRARY_DIR ${LLVM_LIBRARY_OUTPUT_INTDIR}/${LLVM_DEFAULT_TARGET_TRIPLE}) +- set(LIBUNWIND_INSTALL_LIBRARY_DIR lib${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}) ++ set(LIBUNWIND_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}/${LLVM_DEFAULT_TARGET_TRIPLE}) if(LIBCXX_LIBDIR_SUBDIR) string(APPEND LIBUNWIND_LIBRARY_DIR /${LIBUNWIND_LIBDIR_SUBDIR}) string(APPEND LIBUNWIND_INSTALL_LIBRARY_DIR /${LIBUNWIND_LIBDIR_SUBDIR}) @@ -24,11 +24,11 @@ index 48cb8e004e08..fec8144fb95a 100644 elseif(LLVM_LIBRARY_OUTPUT_INTDIR) set(LIBUNWIND_LIBRARY_DIR ${LLVM_LIBRARY_OUTPUT_INTDIR}) - set(LIBUNWIND_INSTALL_LIBRARY_DIR lib${LIBUNWIND_LIBDIR_SUFFIX}) -+ set(LIBUNWIND_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LIBUNWIND_LIBDIR_SUFFIX}) ++ set(LIBUNWIND_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) else() set(LIBUNWIND_LIBRARY_DIR ${CMAKE_BINARY_DIR}/lib${LIBUNWIND_LIBDIR_SUFFIX}) - set(LIBUNWIND_INSTALL_LIBRARY_DIR lib${LIBUNWIND_LIBDIR_SUFFIX}) -+ set(LIBUNWIND_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LIBUNWIND_LIBDIR_SUFFIX}) ++ set(LIBUNWIND_INSTALL_LIBRARY_DIR ${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}) endif() set(CMAKE_ARCHIVE_OUTPUT_DIRECTORY ${LIBUNWIND_LIBRARY_DIR}) diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/llvm/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/llvm/default.nix index f65476a6fd..daf4cfe808 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/llvm/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/llvm/default.nix @@ -12,6 +12,7 @@ , version , release_version , zlib +, which , buildLlvmTools , debugVersion ? false , enableManpages ? false @@ -47,15 +48,10 @@ in stdenv.mkDerivation (rec { propagatedBuildInputs = [ ncurses zlib ]; + checkInputs = [ which ]; + patches = [ ./gnu-install-dirs.patch - # On older CPUs (e.g. Hydra/wendy) we'd be getting an error in this test. - (fetchpatch { - name = "uops-CMOV16rm-noreg.diff"; - url = "https://github.com/llvm/llvm-project/commit/9e9f991ac033.diff"; - sha256 = "sha256:12s8vr6ibri8b48h2z38f3afhwam10arfiqfy4yg37bmc054p5hi"; - stripLen = 1; - }) ] ++ lib.optional enablePolly ./gnu-install-dirs-polly.patch; postPatch = optionalString stdenv.isDarwin '' @@ -75,6 +71,7 @@ in stdenv.mkDerivation (rec { substituteInPlace unittests/IR/CMakeLists.txt \ --replace "PassBuilderCallbacksTest.cpp" "" rm unittests/IR/PassBuilderCallbacksTest.cpp + rm test/tools/llvm-objcopy/ELF/mirror-permissions-unix.test '' + optionalString stdenv.hostPlatform.isMusl '' patch -p1 -i ${../../TLI-musl.patch} substituteInPlace unittests/Support/CMakeLists.txt \ diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/llvm/gnu-install-dirs.patch b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/llvm/gnu-install-dirs.patch index da8dc14451..18fa5fc6d8 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/llvm/gnu-install-dirs.patch +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/llvm/gnu-install-dirs.patch @@ -1,8 +1,8 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt -index 277d0fe54d7b..af69c8be8745 100644 +index 135036f509d2..265c36f8211b 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt -@@ -256,15 +256,21 @@ if (CMAKE_BUILD_TYPE AND +@@ -270,15 +270,21 @@ if (CMAKE_BUILD_TYPE AND message(FATAL_ERROR "Invalid value for CMAKE_BUILD_TYPE: ${CMAKE_BUILD_TYPE}") endif() @@ -25,7 +25,7 @@ index 277d0fe54d7b..af69c8be8745 100644 # They are used as destination of target generators. set(LLVM_RUNTIME_OUTPUT_INTDIR ${CMAKE_CURRENT_BINARY_DIR}/${CMAKE_CFG_INTDIR}/bin) set(LLVM_LIBRARY_OUTPUT_INTDIR ${CMAKE_CURRENT_BINARY_DIR}/${CMAKE_CFG_INTDIR}/lib${LLVM_LIBDIR_SUFFIX}) -@@ -567,9 +573,9 @@ option (LLVM_ENABLE_SPHINX "Use Sphinx to generate llvm documentation." OFF) +@@ -581,9 +587,9 @@ option (LLVM_ENABLE_SPHINX "Use Sphinx to generate llvm documentation." OFF) option (LLVM_ENABLE_OCAMLDOC "Build OCaml bindings documentation." ON) option (LLVM_ENABLE_BINDINGS "Build bindings." ON) @@ -37,7 +37,7 @@ index 277d0fe54d7b..af69c8be8745 100644 CACHE STRING "OCamldoc-generated HTML documentation install directory") option (LLVM_BUILD_EXTERNAL_COMPILER_RT -@@ -1027,7 +1033,7 @@ endif() +@@ -1048,7 +1054,7 @@ endif() if (NOT LLVM_INSTALL_TOOLCHAIN_ONLY) install(DIRECTORY include/llvm include/llvm-c @@ -46,7 +46,7 @@ index 277d0fe54d7b..af69c8be8745 100644 COMPONENT llvm-headers FILES_MATCHING PATTERN "*.def" -@@ -1038,7 +1044,7 @@ if (NOT LLVM_INSTALL_TOOLCHAIN_ONLY) +@@ -1059,7 +1065,7 @@ if (NOT LLVM_INSTALL_TOOLCHAIN_ONLY) ) install(DIRECTORY ${LLVM_INCLUDE_DIR}/llvm ${LLVM_INCLUDE_DIR}/llvm-c @@ -55,7 +55,7 @@ index 277d0fe54d7b..af69c8be8745 100644 COMPONENT llvm-headers FILES_MATCHING PATTERN "*.def" -@@ -1052,13 +1058,13 @@ if (NOT LLVM_INSTALL_TOOLCHAIN_ONLY) +@@ -1073,13 +1079,13 @@ if (NOT LLVM_INSTALL_TOOLCHAIN_ONLY) if (LLVM_INSTALL_MODULEMAPS) install(DIRECTORY include/llvm include/llvm-c @@ -72,11 +72,11 @@ index 277d0fe54d7b..af69c8be8745 100644 RENAME "module.extern.modulemap" ) diff --git a/cmake/modules/AddLLVM.cmake b/cmake/modules/AddLLVM.cmake -index 97c9980c7de3..409e8b615f75 100644 +index 9c2b85374307..5531ceeb2eeb 100644 --- a/cmake/modules/AddLLVM.cmake +++ b/cmake/modules/AddLLVM.cmake -@@ -804,9 +804,9 @@ macro(add_llvm_library name) - +@@ -818,9 +818,9 @@ macro(add_llvm_library name) + get_target_export_arg(${name} LLVM export_to_llvmexports ${umbrella}) install(TARGETS ${name} ${export_to_llvmexports} - LIBRARY DESTINATION lib${LLVM_LIBDIR_SUFFIX} COMPONENT ${name} @@ -88,7 +88,7 @@ index 97c9980c7de3..409e8b615f75 100644 if (NOT LLVM_ENABLE_IDE) add_llvm_install_targets(install-${name} -@@ -1022,7 +1022,7 @@ function(process_llvm_pass_plugins) +@@ -1036,7 +1036,7 @@ function(process_llvm_pass_plugins) "set(LLVM_STATIC_EXTENSIONS ${LLVM_STATIC_EXTENSIONS})") install(FILES ${llvm_cmake_builddir}/LLVMConfigExtensions.cmake @@ -97,7 +97,7 @@ index 97c9980c7de3..409e8b615f75 100644 COMPONENT cmake-exports) set(ExtensionDef "${LLVM_BINARY_DIR}/include/llvm/Support/Extension.def") -@@ -1242,7 +1242,7 @@ macro(add_llvm_example name) +@@ -1250,7 +1250,7 @@ macro(add_llvm_example name) endif() add_llvm_executable(${name} ${ARGN}) if( LLVM_BUILD_EXAMPLES ) @@ -106,7 +106,7 @@ index 97c9980c7de3..409e8b615f75 100644 endif() set_target_properties(${name} PROPERTIES FOLDER "Examples") endmacro(add_llvm_example name) -@@ -1854,7 +1854,7 @@ function(llvm_install_library_symlink name dest type) +@@ -1868,7 +1868,7 @@ function(llvm_install_library_symlink name dest type) set(full_name ${CMAKE_${type}_LIBRARY_PREFIX}${name}${CMAKE_${type}_LIBRARY_SUFFIX}) set(full_dest ${CMAKE_${type}_LIBRARY_PREFIX}${dest}${CMAKE_${type}_LIBRARY_SUFFIX}) @@ -115,8 +115,8 @@ index 97c9980c7de3..409e8b615f75 100644 if(WIN32 AND "${type}" STREQUAL "SHARED") set(output_dir bin) endif() -@@ -1871,7 +1871,7 @@ function(llvm_install_library_symlink name dest type) - endif() +@@ -1879,7 +1879,7 @@ function(llvm_install_library_symlink name dest type) + endfunction() -function(llvm_install_symlink name dest) @@ -124,7 +124,7 @@ index 97c9980c7de3..409e8b615f75 100644 cmake_parse_arguments(ARG "ALWAYS_GENERATE" "COMPONENT" "" ${ARGN}) foreach(path ${CMAKE_MODULE_PATH}) if(EXISTS ${path}/LLVMInstallSymlink.cmake) -@@ -1894,7 +1894,7 @@ function(llvm_install_symlink name dest) +@@ -1902,7 +1902,7 @@ function(llvm_install_symlink name dest) set(full_dest ${dest}${CMAKE_EXECUTABLE_SUFFIX}) install(SCRIPT ${INSTALL_SYMLINK} @@ -133,7 +133,7 @@ index 97c9980c7de3..409e8b615f75 100644 COMPONENT ${component}) if (NOT LLVM_ENABLE_IDE AND NOT ARG_ALWAYS_GENERATE) -@@ -1977,7 +1977,8 @@ function(add_llvm_tool_symlink link_name target) +@@ -1985,7 +1985,8 @@ function(add_llvm_tool_symlink link_name target) endif() if ((TOOL_IS_TOOLCHAIN OR NOT LLVM_INSTALL_TOOLCHAIN_ONLY) AND LLVM_BUILD_TOOLS) @@ -143,12 +143,12 @@ index 97c9980c7de3..409e8b615f75 100644 endif() endif() endfunction() -@@ -2100,9 +2101,9 @@ function(llvm_setup_rpath name) - - if (APPLE) - set(_install_name_dir INSTALL_NAME_DIR "@rpath") -- set(_install_rpath "@loader_path/../lib${LLVM_LIBDIR_SUFFIX}" ${extra_libdir}) -+ set(_install_rpath "@loader_path/../${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}" ${extra_libdir}) +@@ -2114,9 +2115,9 @@ function(llvm_setup_rpath name) + # Since BUILD_SHARED_LIBS is only recommended for use by developers, + # hardcode the rpath to build/install lib dir first in this mode. + # FIXME: update this when there is better solution. +- set(_install_rpath "${LLVM_LIBRARY_OUTPUT_INTDIR}" "${CMAKE_INSTALL_PREFIX}/lib${LLVM_LIBDIR_SUFFIX}" ${extra_libdir}) ++ set(_install_rpath "${LLVM_LIBRARY_OUTPUT_INTDIR}" "${CMAKE_INSTALL_PREFIX}/${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}" ${extra_libdir}) elseif(UNIX) - set(_install_rpath "\$ORIGIN/../lib${LLVM_LIBDIR_SUFFIX}" ${extra_libdir}) + set(_install_rpath "\$ORIGIN/../${CMAKE_INSTALL_LIBDIR}${LLVM_LIBDIR_SUFFIX}" ${extra_libdir}) @@ -185,16 +185,18 @@ index e80c3b5c1cac..482f6d715ef5 100644 # '/.' indicates: copy the contents of the directory directly into diff --git a/cmake/modules/CMakeLists.txt b/cmake/modules/CMakeLists.txt -index 505dc9a29d70..36e6c63af3f4 100644 +index 51b6a4fdc284..4adc2acfc074 100644 --- a/cmake/modules/CMakeLists.txt +++ b/cmake/modules/CMakeLists.txt -@@ -1,4 +1,4 @@ +@@ -1,6 +1,6 @@ + include(LLVMDistributionSupport) + -set(LLVM_INSTALL_PACKAGE_DIR lib${LLVM_LIBDIR_SUFFIX}/cmake/llvm) +set(LLVM_INSTALL_PACKAGE_DIR ${LLVM_INSTALL_CMAKE_DIR} CACHE STRING "Path for CMake subdirectory (defaults to 'cmake/llvm')") set(llvm_cmake_builddir "${LLVM_BINARY_DIR}/${LLVM_INSTALL_PACKAGE_DIR}") # First for users who use an installed LLVM, create the LLVMExports.cmake file. -@@ -107,13 +107,13 @@ foreach(p ${_count}) +@@ -109,13 +109,13 @@ foreach(p ${_count}) set(LLVM_CONFIG_CODE "${LLVM_CONFIG_CODE} get_filename_component(LLVM_INSTALL_PREFIX \"\${LLVM_INSTALL_PREFIX}\" PATH)") endforeach(p) @@ -212,32 +214,32 @@ index 505dc9a29d70..36e6c63af3f4 100644 # Generate a default location for lit if (LLVM_INSTALL_UTILS AND LLVM_BUILD_UTILS) diff --git a/cmake/modules/LLVMInstallSymlink.cmake b/cmake/modules/LLVMInstallSymlink.cmake -index 09fed8085c23..aa79f192abf0 100644 +index 3e6a2c9a2648..52e14d955c60 100644 --- a/cmake/modules/LLVMInstallSymlink.cmake +++ b/cmake/modules/LLVMInstallSymlink.cmake -@@ -10,7 +10,7 @@ function(install_symlink name target outdir) - set(LINK_OR_COPY copy) - endif() +@@ -4,7 +4,7 @@ + function(install_symlink name target outdir) + set(DESTDIR $ENV{DESTDIR}) - set(bindir "${DESTDIR}${CMAKE_INSTALL_PREFIX}/${outdir}/") + set(bindir "${DESTDIR}${outdir}/") message(STATUS "Creating ${name}") diff --git a/docs/CMake.rst b/docs/CMake.rst -index bb821b417ad9..6a528f7c2ad3 100644 +index f1ac2c7d4934..c6e1469b5e13 100644 --- a/docs/CMake.rst +++ b/docs/CMake.rst -@@ -196,7 +196,7 @@ CMake manual, or execute ``cmake --help-variable VARIABLE_NAME``. +@@ -202,7 +202,7 @@ CMake manual, or execute ``cmake --help-variable VARIABLE_NAME``. **LLVM_LIBDIR_SUFFIX**:STRING Extra suffix to append to the directory where libraries are to be installed. On a 64-bit architecture, one could use ``-DLLVM_LIBDIR_SUFFIX=64`` - to install libraries to ``/usr/lib64``. + to install libraries to ``/usr/lib64``. See also ``CMAKE_INSTALL_LIBDIR``. - **CMAKE_C_FLAGS**:STRING - Extra flags to use when compiling C source files. -@@ -550,8 +550,8 @@ LLVM-specific variables + Rarely-used CMake variables + --------------------------- +@@ -551,8 +551,8 @@ LLVM-specific variables **LLVM_INSTALL_DOXYGEN_HTML_DIR**:STRING The path to install Doxygen-generated HTML documentation to. This path can @@ -246,47 +248,9 @@ index bb821b417ad9..6a528f7c2ad3 100644 + either be absolute or relative to the ``CMAKE_INSTALL_PREFIX``. Defaults to + `${CMAKE_INSTALL_DOCDIR}/${project}/doxygen-html`. - **LLVM_ENABLE_SPHINX**:BOOL - If specified, CMake will search for the ``sphinx-build`` executable and will make -@@ -582,13 +582,33 @@ LLVM-specific variables - - **LLVM_INSTALL_SPHINX_HTML_DIR**:STRING - The path to install Sphinx-generated HTML documentation to. This path can -- either be absolute or relative to the CMAKE_INSTALL_PREFIX. Defaults to -- `share/doc/llvm/html`. -+ either be absolute or relative to the ``CMAKE_INSTALL_PREFIX``. Defaults to -+ `${CMAKE_INSTALL_DOCDIR}/${project}/html`. - - **LLVM_INSTALL_OCAMLDOC_HTML_DIR**:STRING - The path to install OCamldoc-generated HTML documentation to. This path can -- either be absolute or relative to the CMAKE_INSTALL_PREFIX. Defaults to -- `share/doc/llvm/ocaml-html`. -+ either be absolute or relative to the ``CMAKE_INSTALL_PREFIX``. Defaults to -+ `${CMAKE_INSTALL_DOCDIR}/${project}/ocaml-html`. -+ -+**CMAKE_INSTALL_BINDIR**:STRING -+ The path to install binary tools, relative to the ``CMAKE_INSTALL_PREFIX``. -+ Defaults to `bin`. -+ -+**CMAKE_INSTALL_LIBDIR**:STRING -+ The path to install libraries, relative to the ``CMAKE_INSTALL_PREFIX``. -+ Defaults to `lib`. -+ -+**CMAKE_INSTALL_INCLUDEDIR**:STRING -+ The path to install header files, relative to the ``CMAKE_INSTALL_PREFIX``. -+ Defaults to `include`. -+ -+**CMAKE_INSTALL_DOCDIR**:STRING -+ The path to install documentation, relative to the ``CMAKE_INSTALL_PREFIX``. -+ Defaults to `share/doc`. -+ -+**CMAKE_INSTALL_MANDIR**:STRING -+ The path to install manpage files, relative to the ``CMAKE_INSTALL_PREFIX``. -+ Defaults to `share/man`. - - **LLVM_CREATE_XCODE_TOOLCHAIN**:BOOL - macOS Only: If enabled CMake will generate a target named -@@ -786,9 +806,11 @@ the ``cmake`` command or by setting it directly in ``ccmake`` or ``cmake-gui``). + **LLVM_LINK_LLVM_DYLIB**:BOOL + If enabled, tools will be linked with the libLLVM shared library. Defaults +@@ -792,9 +792,11 @@ the ``cmake`` command or by setting it directly in ``ccmake`` or ``cmake-gui``). This file is available in two different locations. @@ -377,11 +341,11 @@ index 1a2f04552d13..44fa7d3eec6b 100644 } diff --git a/tools/lto/CMakeLists.txt b/tools/lto/CMakeLists.txt -index 2963f97cad88..69d66c9c9ca1 100644 +index 0af29ad762c5..37b99b83e35c 100644 --- a/tools/lto/CMakeLists.txt +++ b/tools/lto/CMakeLists.txt -@@ -25,7 +25,7 @@ add_llvm_library(LTO SHARED INSTALL_WITH_TOOLCHAIN ${SOURCES} DEPENDS - intrinsics_gen) +@@ -33,7 +33,7 @@ add_llvm_library(${LTO_LIBRARY_NAME} ${LTO_LIBRARY_TYPE} INSTALL_WITH_TOOLCHAIN + ${SOURCES} DEPENDS intrinsics_gen) install(FILES ${LLVM_MAIN_INCLUDE_DIR}/llvm-c/lto.h - DESTINATION include/llvm-c diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/openmp/default.nix b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/openmp/default.nix index 07488c1c33..c5a33df975 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/git/openmp/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/git/openmp/default.nix @@ -18,6 +18,10 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake perl ]; buildInputs = [ llvm ]; + cmakeFlags = [ + "-DLIBOMPTARGET_BUILD_AMDGCN_BCLIB=OFF" # Building the AMDGCN device RTL currently fails + ]; + meta = llvm_meta // { homepage = "https://openmp.llvm.org/"; description = "Support for the OpenMP language"; diff --git a/third_party/nixpkgs/pkgs/development/compilers/llvm/update-git.py b/third_party/nixpkgs/pkgs/development/compilers/llvm/update-git.py index 119a050e47..880cad1c72 100755 --- a/third_party/nixpkgs/pkgs/development/compilers/llvm/update-git.py +++ b/third_party/nixpkgs/pkgs/development/compilers/llvm/update-git.py @@ -7,12 +7,16 @@ import json import os import re import subprocess +import sys from codecs import iterdecode from datetime import datetime from urllib.request import urlopen, Request +DEFAULT_NIX = os.path.join(os.path.dirname(os.path.abspath(__file__)), 'git/default.nix') + + def get_latest_chromium_build(): HISTORY_URL = 'https://omahaproxy.appspot.com/history?os=linux' print(f'GET {HISTORY_URL}') @@ -39,6 +43,16 @@ def get_commit(ref): return json.loads(http_response.read().decode()) +def get_current_revision(): + """Get the current revision of llvmPackages_git.""" + with open(DEFAULT_NIX) as f: + for line in f: + rev = re.search(r'^ rev = "(.*)";', line) + if rev: + return rev.group(1) + sys.exit(1) + + def nix_prefetch_url(url, algo='sha256'): """Prefetches the content of the given URL.""" print(f'nix-prefetch-url {url}') @@ -55,16 +69,18 @@ clang_revision = re.search(r"^CLANG_REVISION = '(.+)'$", clang_update_script, re clang_commit_short = re.search(r"llvmorg-[0-9]+-init-[0-9]+-g([0-9a-f]{8})", clang_revision).group(1) release_version = re.search(r"^RELEASE_VERSION = '(.+)'$", clang_update_script, re.MULTILINE).group(1) commit = get_commit(clang_commit_short) +if get_current_revision() == commit["sha"]: + print('No new update available.') + sys.exit(0) date = datetime.fromisoformat(commit['commit']['committer']['date'].rstrip('Z')).date().isoformat() version = f'unstable-{date}' print('Prefetching source tarball...') hash = nix_prefetch_url(f'https://github.com/llvm/llvm-project/archive/{commit["sha"]}.tar.gz') print('Updating default.nix...') -default_nix = os.path.join(os.path.dirname(os.path.abspath(__file__)), 'git/default.nix') -with fileinput.FileInput(default_nix, inplace=True) as f: +with fileinput.FileInput(DEFAULT_NIX, inplace=True) as f: for line in f: result = re.sub(r'^ release_version = ".+";', f' release_version = "{release_version}";', line) - result = re.sub(r'^ version = ".+";', f' version = "{version}";', line) result = re.sub(r'^ rev = ".*";', f' rev = "{commit["sha"]}";', result) + result = re.sub(r'^ rev-version = ".+";', f' rev-version = "{version}";', result) result = re.sub(r'^ sha256 = ".+";', f' sha256 = "{hash}";', result) print(result, end='') diff --git a/third_party/nixpkgs/pkgs/development/compilers/lobster/default.nix b/third_party/nixpkgs/pkgs/development/compilers/lobster/default.nix index 59e853f4c7..34b45f49ec 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/lobster/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/lobster/default.nix @@ -19,13 +19,13 @@ stdenv.mkDerivation rec { pname = "lobster"; - version = "unstable-2020-12-25"; + version = "unstable-2021-06-18"; src = fetchFromGitHub { owner = "aardappel"; repo = pname; - rev = "70e44d475995b03363dedf9c2bcb817b0db8fdcf"; - sha256 = "0azhminzrkbpvkapass1kccd6123bg7qmcbnzr5774n6bz5365g3"; + rev = "a785316e44b1690da56a3646f90971a72f470a49"; + sha256 = "eY/8mhJ4SUH5QYWqykl0u+8W7AU0FVVya3GNTEUSOP4="; }; nativeBuildInputs = [ cmake ]; diff --git a/third_party/nixpkgs/pkgs/development/compilers/mosml/default.nix b/third_party/nixpkgs/pkgs/development/compilers/mosml/default.nix index f6d2053f31..e7dc9ceae6 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/mosml/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/mosml/default.nix @@ -15,6 +15,10 @@ stdenv.mkDerivation rec { setSourceRoot = ''export sourceRoot="$(echo */src)"''; + # MosML needs a specific RPATH entry pointing to $(out)/lib (added + # by the build system), which patchelf will remove. + dontPatchELF = true; + meta = with lib; { description = "A light-weight implementation of Standard ML"; longDescription = '' diff --git a/third_party/nixpkgs/pkgs/development/compilers/myrddin/default.nix b/third_party/nixpkgs/pkgs/development/compilers/myrddin/default.nix new file mode 100644 index 0000000000..3120426210 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/myrddin/default.nix @@ -0,0 +1,57 @@ +{ stdenv +, lib +, fetchFromGitHub +, pkg-config +, bison +, binutils +, binutils-unwrapped +, makeWrapper +}: + +stdenv.mkDerivation rec { + pname = "myrddin"; + version = "0.3.1"; + + src = fetchFromGitHub { + repo = "mc"; + owner = "oridb"; + rev = "r${version}"; + sha256 = "7ImjiG/rIKGPHq3Vh/mftY7pqw/vfOxD3LJeT87HmCk="; + }; + + nativeBuildInputs = [ + bison + pkg-config + makeWrapper + ]; + + postPatch = '' + substituteInPlace mk/c.mk \ + --replace "-Werror" "" + ''; + + buildPhase = '' + make bootstrap + make + ''; + + postInstall = '' + for b in $out/bin/*; do + wrapProgram $b --prefix PATH : $out/bin:${lib.makeBinPath [ binutils ]} + done + ''; + + checkPhase = '' + make check + ''; + + doCheck = true; + + meta = with lib; { + description = "Systems language that is both powerful and fun to use"; + homepage = "https://myrlang.org/"; + license = licenses.mit; + maintainers = with maintainers; [ luc65r ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/compilers/nim/default.nix b/third_party/nixpkgs/pkgs/development/compilers/nim/default.nix index 21d1017a67..25b1c48735 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/nim/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/nim/default.nix @@ -95,12 +95,12 @@ in { nim-unwrapped = stdenv.mkDerivation rec { pname = "nim-unwrapped"; - version = "1.4.6"; + version = "1.4.8"; strictDeps = true; src = fetchurl { url = "https://nim-lang.org/download/nim-${version}.tar.xz"; - hash = "sha256-D7wPkoLP/oXembxHv6h2Ulud3aKi6uVcGFoIgEuY070="; + hash = "sha256-t5jFd0EdfZW4YxJh27Nnbp0a/Z42dA0ESWagVVtBRBo="; }; buildInputs = [ boehmgc openssl pcre readline sqlite ]; @@ -290,6 +290,8 @@ in { makeWrapper \ ${nim'}/nim/bin/nim $out/bin/${targetPlatform.config}-nim \ + --set-default CC $(command -v $CC) \ + --set-default CXX $(command -v $CXX) \ $wrapperArgs ln -s $out/bin/${targetPlatform.config}-nim $out/bin/nim diff --git a/third_party/nixpkgs/pkgs/development/compilers/ocaml/4.13.nix b/third_party/nixpkgs/pkgs/development/compilers/ocaml/4.13.nix new file mode 100644 index 0000000000..dc805f7e61 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/ocaml/4.13.nix @@ -0,0 +1,9 @@ +import ./generic.nix { + major_version = "4"; + minor_version = "13"; + patch_version = "0-alpha1"; + src = fetchTarball { + url = "https://caml.inria.fr/pub/distrib/ocaml-4.13/ocaml-4.13.0~alpha1.tar.xz"; + sha256 = "071k12q8m2w9bcwvfclyc46pwd9r49v6av36fhjdlqq29niyq915"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/11.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/11.nix index 15238e63ec..d7aaf2dcb5 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/11.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/11.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchFromGitHub, bash, pkg-config, autoconf, cpio, file, which, unzip -, zip, perl, cups, freetype, alsaLib, libjpeg, giflib, libpng, zlib, lcms2 +, zip, perl, cups, freetype, alsa-lib, libjpeg, giflib, libpng, zlib, lcms2 , libX11, libICE, libXrender, libXext, libXt, libXtst, libXi, libXinerama , libXcursor, libXrandr, fontconfig, openjdk11-bootstrap , setJavaClassPath @@ -27,7 +27,7 @@ let nativeBuildInputs = [ pkg-config autoconf unzip ]; buildInputs = [ - cpio file which zip perl zlib cups freetype alsaLib libjpeg giflib + cpio file which zip perl zlib cups freetype alsa-lib libjpeg giflib libpng zlib lcms2 libX11 libICE libXrender libXext libXtst libXt libXtst libXi libXinerama libXcursor libXrandr fontconfig openjdk11-bootstrap ] ++ lib.optionals (!headless && enableGnome2) [ @@ -39,6 +39,7 @@ let ./read-truststore-from-env-jdk10.patch ./currency-date-range-jdk10.patch ./increase-javadoc-heap.patch + ./fix-library-path-jdk11.patch ] ++ lib.optionals (!headless && enableGnome2) [ ./swing-use-gtk-jdk10.patch ]; @@ -136,14 +137,7 @@ let disallowedReferences = [ openjdk11-bootstrap ]; - meta = with lib; { - homepage = "http://openjdk.java.net/"; - license = licenses.gpl2; - description = "The open-source Java Development Kit"; - maintainers = with maintainers; [ edwtjo asbachb ]; - platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" "armv7l-linux" "armv6l-linux" ]; - mainProgram = "java"; - }; + meta = import ./meta.nix lib; passthru = { architecture = ""; diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/12.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/12.nix index 33169be530..3bbe124773 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/12.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/12.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, bash, pkg-config, autoconf, cpio, file, which, unzip -, zip, perl, cups, freetype, alsaLib, libjpeg, giflib, libpng, zlib, lcms2 +, zip, perl, cups, freetype, alsa-lib, libjpeg, giflib, libpng, zlib, lcms2 , libX11, libICE, libXrender, libXext, libXt, libXtst, libXi, libXinerama , libXcursor, libXrandr, fontconfig, openjdk11, fetchpatch , setJavaClassPath @@ -24,7 +24,7 @@ let nativeBuildInputs = [ pkg-config autoconf unzip ]; buildInputs = [ - cpio file which zip perl zlib cups freetype alsaLib libjpeg giflib + cpio file which zip perl zlib cups freetype alsa-lib libjpeg giflib libpng zlib lcms2 libX11 libICE libXrender libXext libXtst libXt libXtst libXi libXinerama libXcursor libXrandr fontconfig openjdk11 ] ++ lib.optionals (!headless && enableGnome2) [ @@ -145,14 +145,7 @@ let disallowedReferences = [ openjdk11 ]; - meta = with lib; { - homepage = "http://openjdk.java.net/"; - license = licenses.gpl2; - description = "The open-source Java Development Kit"; - maintainers = with maintainers; [ edwtjo ]; - platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" "armv7l-linux" "armv6l-linux" ]; - mainProgram = "java"; - }; + meta = import ./meta.nix lib; passthru = { architecture = ""; diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/13.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/13.nix index d3db493c5f..ed79ceafc5 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/13.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/13.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, bash, pkg-config, autoconf, cpio, file, which, unzip -, zip, perl, cups, freetype, alsaLib, libjpeg, giflib, libpng, zlib, lcms2 +, zip, perl, cups, freetype, alsa-lib, libjpeg, giflib, libpng, zlib, lcms2 , libX11, libICE, libXrender, libXext, libXt, libXtst, libXi, libXinerama , libXcursor, libXrandr, fontconfig, openjdk13-bootstrap, fetchpatch , setJavaClassPath @@ -24,7 +24,7 @@ let nativeBuildInputs = [ pkg-config autoconf unzip ]; buildInputs = [ - cpio file which zip perl zlib cups freetype alsaLib libjpeg giflib + cpio file which zip perl zlib cups freetype alsa-lib libjpeg giflib libpng zlib lcms2 libX11 libICE libXrender libXext libXtst libXt libXtst libXi libXinerama libXcursor libXrandr fontconfig openjdk13-bootstrap ] ++ lib.optionals (!headless && enableGnome2) [ @@ -145,14 +145,7 @@ let disallowedReferences = [ openjdk13-bootstrap ]; - meta = with lib; { - homepage = "http://openjdk.java.net/"; - license = licenses.gpl2; - description = "The open-source Java Development Kit"; - maintainers = with maintainers; [ edwtjo ]; - platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" "armv7l-linux" "armv6l-linux" ]; - mainProgram = "java"; - }; + meta = import ./meta.nix lib; passthru = { architecture = ""; diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/14.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/14.nix index 3804999376..247cf941f0 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/14.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/14.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, bash, pkg-config, autoconf, cpio, file, which, unzip -, zip, perl, cups, freetype, alsaLib, libjpeg, giflib, libpng, zlib, lcms2 +, zip, perl, cups, freetype, alsa-lib, libjpeg, giflib, libpng, zlib, lcms2 , libX11, libICE, libXrender, libXext, libXt, libXtst, libXi, libXinerama , libXcursor, libXrandr, fontconfig, openjdk14-bootstrap , setJavaClassPath @@ -24,7 +24,7 @@ let nativeBuildInputs = [ pkg-config autoconf unzip ]; buildInputs = [ - cpio file which zip perl zlib cups freetype alsaLib libjpeg giflib + cpio file which zip perl zlib cups freetype alsa-lib libjpeg giflib libpng zlib lcms2 libX11 libICE libXrender libXext libXtst libXt libXtst libXi libXinerama libXcursor libXrandr fontconfig openjdk14-bootstrap ] ++ lib.optionals (!headless && enableGnome2) [ @@ -141,14 +141,7 @@ let disallowedReferences = [ openjdk14-bootstrap ]; - meta = with lib; { - homepage = "https://openjdk.java.net/"; - license = licenses.gpl2; - description = "The open-source Java Development Kit"; - maintainers = with maintainers; [ edwtjo ]; - platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" "armv7l-linux" "armv6l-linux" ]; - mainProgram = "java"; - }; + meta = import ./meta.nix lib; passthru = { architecture = ""; diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/15.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/15.nix index 6430c97093..d41a245c54 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/15.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/15.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, bash, pkg-config, autoconf, cpio, file, which, unzip -, zip, perl, cups, freetype, alsaLib, libjpeg, giflib, libpng, zlib, lcms2 +, zip, perl, cups, freetype, alsa-lib, libjpeg, giflib, libpng, zlib, lcms2 , libX11, libICE, libXrender, libXext, libXt, libXtst, libXi, libXinerama , libXcursor, libXrandr, fontconfig, openjdk15-bootstrap , setJavaClassPath @@ -24,7 +24,7 @@ let nativeBuildInputs = [ pkg-config autoconf unzip zip file which ]; buildInputs = [ - cpio perl zlib cups freetype alsaLib libjpeg giflib + cpio perl zlib cups freetype alsa-lib libjpeg giflib libpng zlib lcms2 libX11 libICE libXrender libXext libXtst libXt libXtst libXi libXinerama libXcursor libXrandr fontconfig openjdk15-bootstrap ] ++ lib.optionals (!headless && enableGnome2) [ @@ -141,14 +141,7 @@ let disallowedReferences = [ openjdk15-bootstrap ]; - meta = with lib; { - homepage = "https://openjdk.java.net/"; - license = licenses.gpl2; - description = "The open-source Java Development Kit"; - maintainers = with maintainers; [ edwtjo ]; - platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" "armv7l-linux" "armv6l-linux" ]; - mainProgram = "java"; - }; + meta = import ./meta.nix lib; passthru = { architecture = ""; diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/16.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/16.nix index 9a710ed6fa..df8a3a68f4 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/16.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/16.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, fetchFromGitHub, bash, pkg-config, autoconf, cpio -, file, which, unzip, zip, perl, cups, freetype, alsaLib, libjpeg, giflib +, file, which, unzip, zip, perl, cups, freetype, alsa-lib, libjpeg, giflib , libpng, zlib, lcms2, libX11, libICE, libXrender, libXext, libXt, libXtst , libXi, libXinerama, libXcursor, libXrandr, fontconfig, openjdk16-bootstrap , setJavaClassPath @@ -28,7 +28,7 @@ let nativeBuildInputs = [ pkg-config autoconf unzip ]; buildInputs = [ - cpio file which zip perl zlib cups freetype alsaLib libjpeg giflib + cpio file which zip perl zlib cups freetype alsa-lib libjpeg giflib libpng zlib lcms2 libX11 libICE libXrender libXext libXtst libXt libXtst libXi libXinerama libXcursor libXrandr fontconfig openjdk16-bootstrap ] ++ lib.optionals (!headless && enableGnome2) [ @@ -147,14 +147,7 @@ let disallowedReferences = [ openjdk16-bootstrap ]; - meta = with lib; { - homepage = "https://openjdk.java.net/"; - license = licenses.gpl2; - description = "The open-source Java Development Kit"; - maintainers = with maintainers; [ edwtjo ]; - platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" "armv7l-linux" "armv6l-linux" ]; - mainProgram = "java"; - }; + meta = import ./meta.nix lib; passthru = { architecture = ""; diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/8.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/8.nix index 423c09d923..7a69038d5e 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/8.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/8.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, pkg-config, lndir, bash, cpio, file, which, unzip, zip -, cups, freetype, alsaLib, cacert, perl, liberation_ttf, fontconfig, zlib +, cups, freetype, alsa-lib, cacert, perl, liberation_ttf, fontconfig, zlib , libX11, libICE, libXrender, libXext, libXt, libXtst, libXi, libXinerama, libXcursor, libXrandr , libjpeg, giflib , openjdk8-bootstrap @@ -85,7 +85,7 @@ let nativeBuildInputs = [ pkg-config lndir unzip ]; buildInputs = [ - cpio file which zip perl openjdk8-bootstrap zlib cups freetype alsaLib + cpio file which zip perl openjdk8-bootstrap zlib cups freetype alsa-lib libjpeg giflib libX11 libICE libXext libXrender libXtst libXt libXtst libXi libXinerama libXcursor libXrandr fontconfig ] ++ lib.optionals (!headless && enableGnome2) [ diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/11.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/11.nix index 5dd979e552..ae045ddfdb 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/11.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/11.nix @@ -69,10 +69,6 @@ let home = jdk; }; - meta = with lib; { - license = licenses.gpl2; - platforms = platforms.darwin; - }; - + meta = import ./meta.nix lib; }; in jdk diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/8.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/8.nix index 0941aa728e..c7367a5d64 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/8.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/8.nix @@ -73,10 +73,6 @@ let home = jdk; }; - meta = with lib; { - license = licenses.gpl2; - platforms = platforms.darwin; - }; - + meta = import ./meta.nix lib; }; in jdk diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/default.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/default.nix index 509d1ab552..9478f83477 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/default.nix @@ -69,10 +69,6 @@ let home = jdk; }; - meta = with lib; { - license = licenses.gpl2; - platforms = platforms.darwin; - }; - + meta = import ./meta.nix lib; }; in jdk diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/meta.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/meta.nix new file mode 100644 index 0000000000..abe469af69 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/darwin/meta.nix @@ -0,0 +1,4 @@ +lib: (removeAttrs (import ../meta.nix lib) [ "maintainers" ]) // { + platforms = lib.platforms.darwin; + homepage = "https://www.azul.com/"; +} diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/fix-library-path-jdk11.patch b/third_party/nixpkgs/pkgs/development/compilers/openjdk/fix-library-path-jdk11.patch new file mode 100644 index 0000000000..21263dd689 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/fix-library-path-jdk11.patch @@ -0,0 +1,37 @@ +diff --git a/src/hotspot/os/linux/os_linux.cpp b/src/hotspot/os/linux/os_linux.cpp +index 0dbe03349e..847d56778d 100644 +--- a/src/hotspot/os/linux/os_linux.cpp ++++ b/src/hotspot/os/linux/os_linux.cpp +@@ -326,13 +326,13 @@ void os::init_system_properties_values() { + // ... + // 7: The default directories, normally /lib and /usr/lib. + #if defined(AMD64) || (defined(_LP64) && defined(SPARC)) || defined(PPC64) || defined(S390) +- #define DEFAULT_LIBPATH "/usr/lib64:/lib64:/lib:/usr/lib" ++ #define DEFAULT_LIBPATH "" + #else +- #define DEFAULT_LIBPATH "/lib:/usr/lib" ++ #define DEFAULT_LIBPATH "" + #endif + + // Base path of extensions installed on the system. +-#define SYS_EXT_DIR "/usr/java/packages" ++#define SYS_EXT_DIR "" + #define EXTENSIONS_DIR "/lib/ext" + + // Buffer that fits several sprintfs. +@@ -392,13 +392,13 @@ void os::init_system_properties_values() { + strlen(v) + 1 + + sizeof(SYS_EXT_DIR) + sizeof("/lib/") + sizeof(DEFAULT_LIBPATH) + 1, + mtInternal); +- sprintf(ld_library_path, "%s%s" SYS_EXT_DIR "/lib:" DEFAULT_LIBPATH, v, v_colon); ++ sprintf(ld_library_path, "%s", v); + Arguments::set_library_path(ld_library_path); + FREE_C_HEAP_ARRAY(char, ld_library_path); + } + + // Extensions directories. +- sprintf(buf, "%s" EXTENSIONS_DIR ":" SYS_EXT_DIR EXTENSIONS_DIR, Arguments::get_java_home()); ++ sprintf(buf, "%s" EXTENSIONS_DIR, Arguments::get_java_home()); + Arguments::set_ext_dirs(buf); + + FREE_C_HEAP_ARRAY(char, buf); diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/meta.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/meta.nix new file mode 100644 index 0000000000..d635d5c01e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/meta.nix @@ -0,0 +1,8 @@ +lib: with lib; { + homepage = "https://openjdk.java.net/"; + license = licenses.gpl2Only; + description = "The open-source Java Development Kit"; + maintainers = with maintainers; [ edwtjo asbachb ]; + platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" "armv7l-linux" "armv6l-linux" ]; + mainProgram = "java"; +} diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/openjfx/11.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/openjfx/11.nix index 306130a099..228dbf9b14 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/openjfx/11.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/openjfx/11.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, writeText, gradleGen, pkg-config, perl, cmake -, gperf, gtk2, gtk3, libXtst, libXxf86vm, glib, alsaLib, ffmpeg, python, ruby +, gperf, gtk2, gtk3, libXtst, libXxf86vm, glib, alsa-lib, ffmpeg, python, ruby , openjdk11-bootstrap }: let @@ -19,7 +19,7 @@ let sha256 = "1h7qsylr7rnwnbimqjyn3whszp9kv4h3gpicsrb3mradxc9yv194"; }; - buildInputs = [ gtk2 gtk3 libXtst libXxf86vm glib alsaLib ffmpeg ]; + buildInputs = [ gtk2 gtk3 libXtst libXxf86vm glib alsa-lib ffmpeg ]; nativeBuildInputs = [ gradle_ perl pkg-config cmake gperf python ruby ]; dontUseCmakeConfigure = true; diff --git a/third_party/nixpkgs/pkgs/development/compilers/openjdk/openjfx/15.nix b/third_party/nixpkgs/pkgs/development/compilers/openjdk/openjfx/15.nix index e5da2bc3fe..c36cbaa03f 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/openjdk/openjfx/15.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/openjdk/openjfx/15.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchFromGitHub, writeText, openjdk11_headless, gradleGen -, pkg-config, perl, cmake, gperf, gtk2, gtk3, libXtst, libXxf86vm, glib, alsaLib +, pkg-config, perl, cmake, gperf, gtk2, gtk3, libXtst, libXxf86vm, glib, alsa-lib , ffmpeg, python3, ruby }: let @@ -21,7 +21,7 @@ let sha256 = "019glq8rhn6amy3n5jc17vi2wpf1pxpmmywvyz1ga8n09w7xscq1"; }; - buildInputs = [ gtk2 gtk3 libXtst libXxf86vm glib alsaLib ffmpeg ]; + buildInputs = [ gtk2 gtk3 libXtst libXxf86vm glib alsa-lib ffmpeg ]; nativeBuildInputs = [ gradle_ perl pkg-config cmake gperf python3 ruby ]; dontUseCmakeConfigure = true; diff --git a/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk-linux-base.nix b/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk-linux-base.nix index ca8f4106f3..713b32a349 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk-linux-base.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk-linux-base.nix @@ -26,7 +26,7 @@ , gtk2 , pango , cairo -, alsaLib +, alsa-lib , atk , gdk-pixbuf , setJavaClassPath @@ -168,7 +168,7 @@ let result = stdenv.mkDerivation rec { * libXt is only needed on amd64 */ libraries = - [stdenv.cc.libc glib libxml2 ffmpeg libxslt libGL xorg.libXxf86vm alsaLib fontconfig freetype pango gtk2 cairo gdk-pixbuf atk] ++ + [stdenv.cc.libc glib libxml2 ffmpeg libxslt libGL xorg.libXxf86vm alsa-lib fontconfig freetype pango gtk2 cairo gdk-pixbuf atk] ++ lib.optionals swingSupport [xorg.libX11 xorg.libXext xorg.libXtst xorg.libXi xorg.libXp xorg.libXt xorg.libXrender stdenv.cc.cc]; rpath = lib.strings.makeLibraryPath libraries; diff --git a/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk11-linux.nix b/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk11-linux.nix index eafe23c8e7..a232b796a0 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk11-linux.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk11-linux.nix @@ -3,7 +3,7 @@ , xorg , zlib , freetype -, alsaLib +, alsa-lib , setJavaClassPath }: @@ -30,7 +30,7 @@ let result = stdenv.mkDerivation rec { ''; postFixup = '' - rpath="$out/lib/jli:$out/lib/server:$out/lib:${lib.strings.makeLibraryPath [ zlib xorg.libX11 xorg.libXext xorg.libXtst xorg.libXi xorg.libXrender freetype alsaLib]}" + rpath="$out/lib/jli:$out/lib/server:$out/lib:${lib.strings.makeLibraryPath [ zlib xorg.libX11 xorg.libXext xorg.libXtst xorg.libXi xorg.libXrender freetype alsa-lib]}" for f in $(find $out -name "*.so") $(find $out -type f -perm -0100); do patchelf --interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" "$f" || true diff --git a/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk14-linux.nix b/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk14-linux.nix index b1655cd8b8..6604ebbef8 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk14-linux.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/oraclejdk/jdk14-linux.nix @@ -3,7 +3,7 @@ , xorg , zlib , freetype -, alsaLib +, alsa-lib , setJavaClassPath }: @@ -30,7 +30,7 @@ let result = stdenv.mkDerivation rec { ''; postFixup = '' - rpath="$out/lib/jli:$out/lib/server:$out/lib:${lib.strings.makeLibraryPath [ stdenv.cc.cc zlib xorg.libX11 xorg.libXext xorg.libXtst xorg.libXi xorg.libXrender freetype alsaLib]}" + rpath="$out/lib/jli:$out/lib/server:$out/lib:${lib.strings.makeLibraryPath [ stdenv.cc.cc zlib xorg.libX11 xorg.libXext xorg.libXtst xorg.libXi xorg.libXrender freetype alsa-lib]}" for f in $(find $out -name "*.so") $(find $out -type f -perm -0100); do patchelf --interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" "$f" || true diff --git a/third_party/nixpkgs/pkgs/development/compilers/ponyc/pony-corral.nix b/third_party/nixpkgs/pkgs/development/compilers/ponyc/pony-corral.nix index e9473b81f4..3f40a4d788 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/ponyc/pony-corral.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/ponyc/pony-corral.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation ( rec { pname = "corral"; - version = "0.5.0"; + version = "0.5.1"; src = fetchFromGitHub { owner = "ponylang"; repo = pname; rev = version; - sha256 = "sha256-mQ/SxnppChZ+6PKVo5VM+QiNn94F4qJT1kQSrwXTa7k="; + sha256 = "1g4dkf5hsnykn3x6yx6ycjzmzzr1nwl59lj13j7zyka1ibv53hwf"; }; buildInputs = [ ponyc ]; diff --git a/third_party/nixpkgs/pkgs/development/compilers/qbe/default.nix b/third_party/nixpkgs/pkgs/development/compilers/qbe/default.nix index b4bc2a35a5..e2e0c92a16 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/qbe/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/qbe/default.nix @@ -1,21 +1,27 @@ { lib, stdenv , fetchgit , unstableGitUpdater +, callPackage }: stdenv.mkDerivation rec { pname = "qbe"; - version = "unstable-2020-10-05"; + version = "unstable-2021-06-17"; src = fetchgit { url = "git://c9x.me/qbe.git"; - rev = "496c069405cd79aed968f59dd5a5f92d1f96809f"; - sha256 = "1vpszl77j9mnw8r0p9l23k8nxbnz31lgii7v3mai130nbpjsjsdf"; + rev = "6d9ee1389572ae985f6a39bb99dbd10cdf42c123"; + sha256 = "NaURS5Eu8NBd92wGQcyFEXCALU9Z93nNQeZ8afq4KMw="; }; makeFlags = [ "PREFIX=$(out)" ]; - passthru.updateScript = unstableGitUpdater { }; + doCheck = true; + + passthru = { + tests.can-run-hello-world = callPackage ./test-can-run-hello-world.nix {}; + updateScript = unstableGitUpdater { }; + }; meta = with lib; { homepage = "https://c9x.me/compile/"; diff --git a/third_party/nixpkgs/pkgs/development/compilers/qbe/test-can-run-hello-world.nix b/third_party/nixpkgs/pkgs/development/compilers/qbe/test-can-run-hello-world.nix new file mode 100644 index 0000000000..5192bb881f --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/qbe/test-can-run-hello-world.nix @@ -0,0 +1,32 @@ +{ stdenv +, writeText +, qbe +}: + +# The hello world program available at https://c9x.me/compile/ +let helloWorld = writeText "hello-world.ssa" '' + function w $add(w %a, w %b) { # Define a function add + @start + %c =w add %a, %b # Adds the 2 arguments + ret %c # Return the result + } + export function w $main() { # Main function + @start + %r =w call $add(w 1, w 1) # Call add(1, 1) + call $printf(l $fmt, w %r, ...) # Show the result + ret 0 + } + data $fmt = { b "One and one make %d!\n", b 0 } +''; + +in stdenv.mkDerivation { + name = "qbe-test-can-run-hello-world"; + meta.timeout = 10; + buildCommand = '' + ${qbe}/bin/qbe -o asm.s ${helloWorld} + cc -o out asm.s + ./out | grep 'One and one make 2!' + touch $out + ''; +} + diff --git a/third_party/nixpkgs/pkgs/development/compilers/reason/default.nix b/third_party/nixpkgs/pkgs/development/compilers/reason/default.nix index a65748d064..dbc6f40a68 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/reason/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/reason/default.nix @@ -1,5 +1,5 @@ -{ lib, stdenv, makeWrapper, fetchFromGitHub, ocaml, findlib, dune_2 -, fix, menhir, menhirLib, menhirSdk, merlin-extend, ppx_tools_versioned, utop, cppo +{ lib, callPackage, stdenv, makeWrapper, fetchFromGitHub, ocaml, findlib, dune_2 +, fix, menhir, menhirLib, menhirSdk, merlin-extend, ppxlib, utop, cppo, ppx_derivers }: stdenv.mkDerivation rec { @@ -13,11 +13,28 @@ stdenv.mkDerivation rec { sha256 = "0m6ldrci1a4j0qv1cbwh770zni3al8qxsphl353rv19f6rblplhs"; }; - nativeBuildInputs = [ makeWrapper menhir ]; + nativeBuildInputs = [ + makeWrapper + menhir + ]; - propagatedBuildInputs = [ menhirLib merlin-extend ppx_tools_versioned ]; + buildInputs = [ + cppo + dune_2 + findlib + fix + menhir + menhirSdk + ocaml + ppxlib + utop + ]; - buildInputs = [ ocaml findlib dune_2 cppo fix utop menhir menhirSdk ]; + propagatedBuildInputs = [ + menhirLib + merlin-extend + ppx_derivers + ]; buildFlags = [ "build" ]; # do not "make tests" before reason lib is installed @@ -29,11 +46,16 @@ stdenv.mkDerivation rec { --prefix OCAMLPATH : "$OCAMLPATH:$OCAMLFIND_DESTDIR" ''; + passthru.tests = { + hello = callPackage ./tests/hello { }; + }; + meta = with lib; { homepage = "https://reasonml.github.io/"; + downloadPage = "https://github.com/reasonml/reason"; description = "Facebook's friendly syntax to OCaml"; license = licenses.mit; inherit (ocaml.meta) platforms; - maintainers = [ maintainers.volth ]; + maintainers = with maintainers; [ superherointj ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/default.nix b/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/default.nix new file mode 100644 index 0000000000..9b551a0a1e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/default.nix @@ -0,0 +1,23 @@ +{ lib, buildDunePackage, reason }: + +buildDunePackage rec { + pname = "helloreason"; + version = "0.0.1"; + + src = ./.; + + useDune2 = true; + + buildInputs = [ + reason + ]; + + doCheck = true; + + doInstallCheck = true; + postInstallCheck = '' + $out/bin/${pname} | grep -q "Hello From Reason" > /dev/null + ''; + + meta.timeout = 60; +} diff --git a/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/dune b/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/dune new file mode 100644 index 0000000000..578a56dc6d --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/dune @@ -0,0 +1,4 @@ +(executable + (name helloreason) + (public_name helloreason) + (libraries reason)) diff --git a/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/helloreason.opam b/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/helloreason.opam new file mode 100644 index 0000000000..e69de29bb2 diff --git a/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/helloreason.re b/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/helloreason.re new file mode 100644 index 0000000000..795bd314dc --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/reason/tests/hello/helloreason.re @@ -0,0 +1,6 @@ +let sayHello = () => { + let fromWhom = "From Reason"; + print_endline("Hello " ++ fromWhom); +}; + +sayHello(); diff --git a/third_party/nixpkgs/pkgs/development/compilers/rust/1_52.nix b/third_party/nixpkgs/pkgs/development/compilers/rust/1_52.nix index bfd6fc47ad..49176ad3fe 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/rust/1_52.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/rust/1_52.nix @@ -15,21 +15,22 @@ , CoreFoundation, Security , pkgsBuildTarget, pkgsBuildBuild, pkgsBuildHost , makeRustPlatform -, llvmPackages_11, llvm_11 +, llvmPackages_11 +, llvmPackages_12, llvm_12 } @ args: import ./default.nix { rustcVersion = "1.52.1"; rustcSha256 = "sha256-Om8jom0Oj4erv78yxc19qgwLcdCYar78Vrml+/vQv5g="; - llvmSharedForBuild = pkgsBuildBuild.llvmPackages_11.libllvm.override { enableSharedLibraries = true; }; - llvmSharedForHost = pkgsBuildHost.llvmPackages_11.libllvm.override { enableSharedLibraries = true; }; - llvmSharedForTarget = pkgsBuildTarget.llvmPackages_11.libllvm.override { enableSharedLibraries = true; }; + llvmSharedForBuild = pkgsBuildBuild.llvmPackages_12.libllvm.override { enableSharedLibraries = true; }; + llvmSharedForHost = pkgsBuildHost.llvmPackages_12.libllvm.override { enableSharedLibraries = true; }; + llvmSharedForTarget = pkgsBuildTarget.llvmPackages_12.libllvm.override { enableSharedLibraries = true; }; llvmBootstrapForDarwin = llvmPackages_11; # For use at runtime - llvmShared = llvm_11.override { enableSharedLibraries = true; }; + llvmShared = llvm_12.override { enableSharedLibraries = true; }; # Note: the version MUST be one version prior to the version we're # building @@ -56,4 +57,4 @@ import ./default.nix { ]; } -(builtins.removeAttrs args [ "fetchpatch" "pkgsBuildHost" "llvmPackages_11" "llvm_11"]) +(builtins.removeAttrs args [ "fetchpatch" "pkgsBuildHost" "llvmPackages_11" "llvmPackages_12" "llvm_12"]) diff --git a/third_party/nixpkgs/pkgs/development/compilers/rust/make-rust-platform.nix b/third_party/nixpkgs/pkgs/development/compilers/rust/make-rust-platform.nix index 53ce0391e4..b7379ac677 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/rust/make-rust-platform.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/rust/make-rust-platform.nix @@ -8,10 +8,12 @@ rec { }; fetchCargoTarball = buildPackages.callPackage ../../../build-support/rust/fetchCargoTarball.nix { + git = buildPackages.gitMinimal; inherit cargo; }; buildRustPackage = callPackage ../../../build-support/rust { + git = buildPackages.gitMinimal; inherit cargoBuildHook cargoCheckHook cargoInstallHook cargoSetupHook fetchCargoTarball importCargoLock rustc; }; diff --git a/third_party/nixpkgs/pkgs/development/compilers/scala-runners/default.nix b/third_party/nixpkgs/pkgs/development/compilers/scala-runners/default.nix new file mode 100644 index 0000000000..e379bf4e38 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/scala-runners/default.nix @@ -0,0 +1,31 @@ +{ stdenv, lib, fetchFromGitHub, jre, coursier }: + +stdenv.mkDerivation rec { + pname = "scala-runners"; + version = "unstable-2020-02-02"; + + src = fetchFromGitHub { + repo = pname; + owner = "dwijnand"; + rev = "95e03c9f9de0fe0ab61eeb6dea2a364f9d081d31"; + sha256 = "0mvlc6fxsh5d6gsyak9n3g98g4r061n8pir37jpiqb7z00m9lfrx"; + }; + + installPhase = '' + mkdir -p $out/bin $out/lib + sed -ie "s| cs | ${coursier}/bin/coursier |" scala-runner + cp scala-runner $out/lib + ln -s $out/lib/scala-runner $out/bin/scala + ln -s $out/lib/scala-runner $out/bin/scalac + ln -s $out/lib/scala-runner $out/bin/scalap + ln -s $out/lib/scala-runner $out/bin/scaladoc + ''; + + meta = with lib; { + homepage = "https://github.com/dwijnand/scala-runners"; + description = "An alternative implementation of the Scala distribution's runners"; + license = licenses.asl20; + platforms = platforms.all; + maintainers = with maintainers; [ hrhino ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/compilers/scryer-prolog/cargo.patch b/third_party/nixpkgs/pkgs/development/compilers/scryer-prolog/cargo.patch new file mode 100644 index 0000000000..61a36c9ad1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/scryer-prolog/cargo.patch @@ -0,0 +1,101 @@ +diff --git a/Cargo.lock b/Cargo.lock +index ef25833..d9de212 100644 +--- a/Cargo.lock ++++ b/Cargo.lock +@@ -41,9 +41,9 @@ checksum = "f8aac770f1885fd7e387acedd76065302551364496e46b3dd00860b2f8359b9d" + + [[package]] + name = "az" +-version = "0.3.1" ++version = "1.0.0" + source = "registry+https://github.com/rust-lang/crates.io-index" +-checksum = "41a6b78289a33e09b00818ca8c90ab17c5dabb6e74f4b29a6de679c0e0886ade" ++checksum = "e9bcd47d94aa4eb8c076b50fc61a75020789394ffb9bd74a180b3379130f6569" + + [[package]] + name = "base64" +@@ -384,9 +384,9 @@ dependencies = [ + + [[package]] + name = "gmp-mpfr-sys" +-version = "1.2.2" ++version = "1.4.0" + source = "registry+https://github.com/rust-lang/crates.io-index" +-checksum = "63d7f805cf9df081683d463f62864bda8b8e3ce7162a8e11cd0c49f27b8ce89b" ++checksum = "ad4e8e85ec9fb902b4564deeb17b1a263d3ba1334bef56154418aa045b159508" + dependencies = [ + "libc", + "winapi 0.3.8", +@@ -766,15 +766,6 @@ version = "0.1.2" + source = "registry+https://github.com/rust-lang/crates.io-index" + checksum = "77af24da69f9d9341038eba93a073b1fdaaa1b788221b00a69bce9e762cb32de" + +-[[package]] +-name = "openssl-src" +-version = "111.9.0+1.1.1g" +-source = "registry+https://github.com/rust-lang/crates.io-index" +-checksum = "a2dbe10ddd1eb335aba3780eb2eaa13e1b7b441d2562fd962398740927f39ec4" +-dependencies = [ +- "cc", +-] +- + [[package]] + name = "openssl-sys" + version = "0.9.58" +@@ -784,7 +775,6 @@ dependencies = [ + "autocfg 1.0.0", + "cc", + "libc", +- "openssl-src", + "pkg-config", + "vcpkg", + ] +@@ -1159,9 +1149,9 @@ dependencies = [ + + [[package]] + name = "rug" +-version = "1.8.0" ++version = "1.11.0" + source = "registry+https://github.com/rust-lang/crates.io-index" +-checksum = "72315b6d9cb7d886fb99724330c47ceb29e923df657c31da3849fe88c0ded710" ++checksum = "e538d00da450a8e48aac7e6322e67b2dc86ec71a1feeac0e3954c4f07f01bc45" + dependencies = [ + "az", + "gmp-mpfr-sys", +@@ -1232,7 +1222,7 @@ checksum = "d29ab0c6d3fc0ee92fe66e2d99f700eab17a8d57d1c1d3b748380fb20baa78cd" + + [[package]] + name = "scryer-prolog" +-version = "0.8.126" ++version = "0.8.127" + dependencies = [ + "base64 0.12.3", + "blake2", +@@ -1243,6 +1233,7 @@ dependencies = [ + "divrem", + "downcast", + "git-version", ++ "gmp-mpfr-sys", + "hostname", + "indexmap", + "lazy_static", +diff --git a/Cargo.toml b/Cargo.toml +index c359e1b..75c4325 100644 +--- a/Cargo.toml ++++ b/Cargo.toml +@@ -41,10 +41,14 @@ ring = "0.16.13" + ripemd160 = "0.8.0" + sha3 = "0.8.2" + blake2 = "0.8.1" +-openssl = { version = "0.10.29", features = ["vendored"] } ++openssl = { version = "0.10.29" } + native-tls = "0.2.4" + chrono = "0.4.11" + select = "0.4.3" + roxmltree = "0.11.0" + base64 = "0.12.3" + sodiumoxide = "0.2.6" ++ ++[dependencies.gmp-mpfr-sys] ++version = "1.4" ++features = ["use-system-libs"] diff --git a/third_party/nixpkgs/pkgs/development/compilers/scryer-prolog/default.nix b/third_party/nixpkgs/pkgs/development/compilers/scryer-prolog/default.nix new file mode 100644 index 0000000000..534379bcac --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/compilers/scryer-prolog/default.nix @@ -0,0 +1,36 @@ +{ lib +, fetchFromGitHub +, rustPlatform +, gmp +, libmpc +, mpfr +, openssl +, pkg-config +}: + +rustPlatform.buildRustPackage rec { + pname = "scryer-prolog"; + version = "0.8.127"; + + src = fetchFromGitHub { + owner = "mthom"; + repo = "scryer-prolog"; + rev = "v${version}"; + sha256 = "0307yclslkdx6f0h0101a3da47rhz6qizf4i8q8rjh4id8wpdsn8"; + }; + + # Use system openssl, gmp, mpc and mpfr. + cargoPatches = [ ./cargo.patch ]; + + cargoSha256 = "0gb0l2wwf8079jwggn9zxk8pz8pxg3b7pin1d7dsbd4ij52lzyi2"; + + nativeBuildInputs = [ pkg-config ]; + buildInputs = [ openssl gmp libmpc mpfr ]; + + meta = with lib; { + description = "A modern Prolog implementation written mostly in Rust."; + homepage = "https://github.com/mthom/scryer-prolog"; + license = with licenses; [ bsd3 ]; + maintainers = with maintainers; [ malbarbo ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/compilers/serpent/default.nix b/third_party/nixpkgs/pkgs/development/compilers/serpent/default.nix index fbcbf4485a..227e8037ea 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/serpent/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/serpent/default.nix @@ -36,7 +36,7 @@ stdenv.mkDerivation { ''; homepage = "https://github.com/ethereum/wiki/wiki/Serpent"; license = with licenses; [ wtfpl ]; - maintainers = with maintainers; [ chris-martin ]; + maintainers = with maintainers; [ ]; platforms = platforms.all; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/shaderc/default.nix b/third_party/nixpkgs/pkgs/development/compilers/shaderc/default.nix index 678ab3adb0..40c216d79c 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/shaderc/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/shaderc/default.nix @@ -8,24 +8,24 @@ let glslang = fetchFromGitHub { owner = "KhronosGroup"; repo = "glslang"; - rev = "3ee5f2f1d3316e228916788b300d786bb574d337"; - sha256 = "1l5h9d92mzd35pgs0wibqfg7vbl771lwnvdlcsyhf6999khn5dzv"; + rev = "18eef33bd7a4bf5ad8c69f99cb72022608cf6e73"; + sha256 = "sha256-tkWVvYmSpJPaZ8VJOkAWndDWhA0PiHAkR3feBAo+knM="; }; spirv-tools = fetchFromGitHub { owner = "KhronosGroup"; repo = "SPIRV-Tools"; - rev = "b63f0e5ed3e818870968ebf6af73317127fd07b0"; - sha256 = "1chv30azfp76nha428ivg4ixrij6d8pxj5kn3jam87gmkmgc9zhm"; + rev = "c2d5375fa7cc87c93f692e7200d5d974283d4391"; + sha256 = "sha256-tMJRljrlH+qb+27rTn+3LuEyMOVpiU0zSCiGNfUTb6g="; }; spirv-headers = fetchFromGitHub { owner = "KhronosGroup"; repo = "SPIRV-Headers"; - rev = "979924c8bc839e4cb1b69d03d48398551f369ce7"; - sha256 = "07vyjlblpm4zhfds612h86lnz0qvrj5qqw5z2zzfa3m9fax7cm85"; + rev = "0c28b6451d77774912e52949c1e57fa726edf113"; + sha256 = "sha256-KpCMceTV/BRaoJe1qeXhKYQNQqdGaM6Q9nklpJKzHFY="; }; in stdenv.mkDerivation rec { pname = "shaderc"; - version = "2020.2"; + version = "2021.0"; outputs = [ "out" "lib" "bin" "dev" "static" ]; @@ -33,7 +33,7 @@ in stdenv.mkDerivation rec { owner = "google"; repo = "shaderc"; rev = "v${version}"; - sha256 = "1sxz8872x3rdlrhmbn83r1vniq4j51jnk0ka3447fq68il4myf1w"; + sha256 = "sha256-RfSMzrGVtdXbr/mjSrHoN447e3vMQfJbesQMvLOARBs="; }; patchPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/compilers/smlnj/bootstrap.nix b/third_party/nixpkgs/pkgs/development/compilers/smlnj/bootstrap.nix index 91eb9fc841..aacebd48e9 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/smlnj/bootstrap.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/smlnj/bootstrap.nix @@ -1,3 +1,7 @@ +# This derivation should be redundant, now that regular smlnj works on Darwin, +# and is preserved only for pre-existing direct usage. New use cases should +# just use the regular smlnj derivation. + { lib, stdenv, fetchurl, cpio, rsync, xar, makeWrapper }: stdenv.mkDerivation rec { diff --git a/third_party/nixpkgs/pkgs/development/compilers/smlnj/default.nix b/third_party/nixpkgs/pkgs/development/compilers/smlnj/default.nix index 3e987e8ccd..d6d50f0303 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/smlnj/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/smlnj/default.nix @@ -1,11 +1,9 @@ -{ lib, stdenv, fetchurl }: +{ lib, stdenv, fetchurl, Libsystem }: let version = "110.95"; baseurl = "http://smlnj.cs.uchicago.edu/dist/working/${version}"; - isArch64 = stdenv.system == "x86_64-linux"; - - arch = if isArch64 + arch = if stdenv.is64bit then "64" else "32"; @@ -14,7 +12,7 @@ let boot64 = { url = "${baseurl}/boot.amd64-unix.tgz"; sha256 = "1zn96a83kb6bn6228yfjsvb58m2qxw9k4j3qz0p9c8za479w4ch6"; }; - bootBinary = if isArch64 + bootBinary = if stdenv.is64bit then boot64 else boot32; @@ -53,6 +51,10 @@ in stdenv.mkDerivation { sed -i '/PATH=/d' config/_arch-n-opsys base/runtime/config/gen-posix-names.sh echo SRCARCHIVEURL="file:/$TMP" > config/srcarchiveurl patch --verbose config/_heap2exec ${./heap2exec.diff} + '' + lib.optionalString stdenv.isDarwin '' + # Locate standard headers like + substituteInPlace base/runtime/config/gen-posix-names.sh \ + --replace "\$SDK_PATH/usr" "${Libsystem}" ''; unpackPhase = '' @@ -83,7 +85,7 @@ in stdenv.mkDerivation { description = "Standard ML of New Jersey, a compiler"; homepage = "http://smlnj.org"; license = licenses.bsd3; - platforms = [ "x86_64-linux" "i686-linux" ]; + platforms = [ "x86_64-linux" "i686-linux" "x86_64-darwin" ]; maintainers = with maintainers; [ thoughtpolice ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/compilers/terra/default.nix b/third_party/nixpkgs/pkgs/development/compilers/terra/default.nix index bd50ea9caa..ac1851a683 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/terra/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/terra/default.nix @@ -1,27 +1,53 @@ -{ lib, stdenv, fetchurl, fetchFromGitHub -, llvmPackages, ncurses, lua -}: +{ lib, stdenv, fetchFromGitHub, llvmPackages, ncurses, cmake, libxml2 +, symlinkJoin, breakpointHook, cudaPackages, enableCUDA ? false }: let - luajitArchive = "LuaJIT-2.0.5.tar.gz"; - luajitSrc = fetchurl { - url = "http://luajit.org/download/${luajitArchive}"; - sha256 = "0yg9q4q6v028bgh85317ykc9whgxgysp76qzaqgq55y6jy11yjw7"; + luajitRev = "9143e86498436892cb4316550be4d45b68a61224"; + luajitBase = "LuaJIT-${luajitRev}"; + luajitArchive = "${luajitBase}.tar.gz"; + luajitSrc = fetchFromGitHub { + owner = "LuaJIT"; + repo = "LuaJIT"; + rev = luajitRev; + sha256 = "1zw1yr0375d6jr5x20zvkvk76hkaqamjynbswpl604w6r6id070b"; }; -in -stdenv.mkDerivation rec { + + llvmMerged = symlinkJoin { + name = "llvmClangMerged"; + paths = with llvmPackages; [ + llvm.out + llvm.dev + llvm.lib + clang-unwrapped.out + clang-unwrapped.dev + clang-unwrapped.lib + ]; + }; + + cuda = cudaPackages.cudatoolkit_11; + + clangVersion = llvmPackages.clang-unwrapped.version; + +in stdenv.mkDerivation rec { pname = "terra"; - version = "1.0.0pre1175_${builtins.substring 0 7 src.rev}"; + version = "1.0.0-beta3_${builtins.substring 0 7 src.rev}"; src = fetchFromGitHub { - owner = "zdevito"; - repo = "terra"; - rev = "ef6a75ffee15a30f3c74f4e6943851cfbc0fec3d"; - sha256 = "0aky17vbv3d9zng34hp17p9zb00dbzwhvzsdjzrrqvk9lmyvix0s"; + owner = "terralang"; + repo = "terra"; + rev = "99ff93f8c60c89bbe2dc7c63eab9bfe2f4c4833e"; + sha256 = "0ww54xjvv6p8jwsh6hml3v527zgnv2gj58gpb818bbg4k1jwa5fl"; }; - nativeBuildInputs = [ lua ]; - buildInputs = with llvmPackages; [ llvm clang-unwrapped ncurses ]; + nativeBuildInputs = [ cmake ]; + buildInputs = [ llvmMerged ncurses libxml2 ] ++ lib.optional enableCUDA cuda; + + cmakeFlags = [ + "-DHAS_TERRA_VERSION=0" + "-DTERRA_VERSION=${version}" + "-DTERRA_LUA=luajit" + "-DCLANG_RESOURCE_DIR=${llvmMerged}/lib/clang/${clangVersion}" + ] ++ lib.optional enableCUDA "-DTERRA_ENABLE_CUDA=ON"; doCheck = true; enableParallelBuilding = true; @@ -29,40 +55,36 @@ stdenv.mkDerivation rec { outputs = [ "bin" "dev" "out" "static" ]; patches = [ ./nix-cflags.patch ]; + postPatch = '' - substituteInPlace Makefile \ - --replace '-lcurses' '-lncurses' + sed -i '/file(DOWNLOAD "''${LUAJIT_URL}" "''${LUAJIT_TAR}")/d' \ + cmake/Modules/GetLuaJIT.cmake substituteInPlace src/terralib.lua \ --subst-var-by NIX_LIBC_INCLUDE ${lib.getDev stdenv.cc.libc}/include ''; - preBuild = '' - cat >Makefile.inc< upx != null; stdenv.mkDerivation rec { pname = "vlang"; - version = "0.1.21"; + version = "weekly.2021.25"; src = fetchFromGitHub { owner = "vlang"; repo = "v"; rev = version; - sha256 = "0npd7a7nhd6r9mr99naib9scqk30209hz18nxif27284ckjbl4fk"; + sha256 = "0y4a5rmpcdqina32d6azbmsbi3zqqfl413sicg72x6a1pm2vg33j"; }; # V compiler source translated to C for bootstrap. @@ -18,18 +18,19 @@ stdenv.mkDerivation rec { vc = fetchFromGitHub { owner = "vlang"; repo = "vc"; - rev = "950a90b6acaebad1c6ddec5486fc54307e38a9cd"; - sha256 = "1dh5l2m207rip1xj677hvbp067inw28n70ddz5wxzfpmaim63c0l"; + rev = "3201d2dd2faadfa370da0bad2a749a664ad5ade3"; + sha256 = "0xzkjdph5wfjr3qfkihgc27vsbbjh2l31rp8z2avq9hc531hwvrz"; }; - enableParallelBuilding = true; propagatedBuildInputs = [ glfw freetype openssl ] ++ lib.optional stdenv.hostPlatform.isUnix upx; buildPhase = '' runHook preBuild cc -std=gnu11 $CFLAGS -w -o v $vc/v.c -lm $LDFLAGS - ./v -prod -cflags `$CFLAGS` -o v compiler + # vlang seems to want to write to $HOME/.vmodules, + # so lets give it a writable HOME + HOME=$PWD ./v -prod self # Exclude thirdparty/vschannel as it is windows-specific. find thirdparty -path thirdparty/vschannel -prune -o -type f -name "*.c" -execdir cc -std=gnu11 $CFLAGS -w -c {} $LDFLAGS ';' runHook postBuild @@ -39,8 +40,8 @@ stdenv.mkDerivation rec { runHook preInstall mkdir -p $out/{bin,lib,share} cp -r examples $out/share - cp -r {vlib,thirdparty} $out/lib - cp v $out/lib + cp -r {cmd,vlib,thirdparty} $out/lib + mv v $out/lib ln -s $out/lib/v $out/bin/v runHook postInstall ''; diff --git a/third_party/nixpkgs/pkgs/development/compilers/zig/default.nix b/third_party/nixpkgs/pkgs/development/compilers/zig/default.nix index a31a9e6ca4..60ca574f1c 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/zig/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/zig/default.nix @@ -37,6 +37,13 @@ stdenv.mkDerivation rec { export HOME=$TMPDIR; ''; + doCheck = true; + checkPhase = '' + runHook preCheck + ./zig test --cache-dir "$TMPDIR" -I $src/test $src/test/behavior.zig + runHook postCheck + ''; + meta = with lib; { homepage = "https://ziglang.org/"; description = @@ -48,4 +55,4 @@ stdenv.mkDerivation rec { broken = stdenv.isDarwin; }; } -# TODO: checkPhase + diff --git a/third_party/nixpkgs/pkgs/development/compilers/zulu/8.nix b/third_party/nixpkgs/pkgs/development/compilers/zulu/8.nix index 591f10b3be..6fcdacf535 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/zulu/8.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/zulu/8.nix @@ -7,7 +7,7 @@ , setJavaClassPath , zulu # minimum dependencies -, alsaLib +, alsa-lib , fontconfig , freetype , xorg @@ -49,7 +49,7 @@ in stdenv.mkDerivation { }; buildInputs = lib.optionals stdenv.isLinux [ - alsaLib # libasound.so wanted by lib/libjsound.so + alsa-lib # libasound.so wanted by lib/libjsound.so fontconfig freetype stdenv.cc.cc # libstdc++.so.6 diff --git a/third_party/nixpkgs/pkgs/development/compilers/zulu/default.nix b/third_party/nixpkgs/pkgs/development/compilers/zulu/default.nix index cd11818774..81edb8b469 100644 --- a/third_party/nixpkgs/pkgs/development/compilers/zulu/default.nix +++ b/third_party/nixpkgs/pkgs/development/compilers/zulu/default.nix @@ -7,7 +7,7 @@ , setJavaClassPath , zulu # minimum dependencies -, alsaLib +, alsa-lib , fontconfig , freetype , zlib @@ -50,7 +50,7 @@ in stdenv.mkDerivation { }; buildInputs = lib.optionals stdenv.isLinux [ - alsaLib # libasound.so wanted by lib/libjsound.so + alsa-lib # libasound.so wanted by lib/libjsound.so fontconfig freetype stdenv.cc.cc # libstdc++.so.6 diff --git a/third_party/nixpkgs/pkgs/development/coq-modules/VST/default.nix b/third_party/nixpkgs/pkgs/development/coq-modules/VST/default.nix index ad5caec949..5ee1df7741 100644 --- a/third_party/nixpkgs/pkgs/development/coq-modules/VST/default.nix +++ b/third_party/nixpkgs/pkgs/development/coq-modules/VST/default.nix @@ -8,11 +8,9 @@ with lib; mkCoqDerivation { repo = "VST"; inherit version; defaultVersion = with versions; switch coq.coq-version [ - { case = range "8.12" "8.13"; out = "2.7.1"; } - { case = "8.11"; out = "2.6"; } + { case = range "8.12" "8.13"; out = "2.8"; } ] null; - release."2.7.1".sha256 = "1674j7bkvihiv19vizm99dp6gj3lryb00zx6a87jz214f3ydcvnj"; - release."2.6".sha256 = "00bf9hl4pvmsqa08lzjs1mrxyfgfxq4k6778pnldmc8ichm90jgk"; + release."2.8".sha256 = "sha256-cyK88uzorRfjapNQ6XgQEmlbWnDsiyLve5po1VG52q0="; releaseRev = v: "v${v}"; propagatedBuildInputs = [ compcert ]; diff --git a/third_party/nixpkgs/pkgs/development/coq-modules/compcert/default.nix b/third_party/nixpkgs/pkgs/development/coq-modules/compcert/default.nix new file mode 100644 index 0000000000..3b94a8087d --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/coq-modules/compcert/default.nix @@ -0,0 +1,110 @@ +{ lib, fetchzip, mkCoqDerivation, coq, flocq, compcert +, ocamlPackages, fetchpatch, makeWrapper, coq2html +, stdenv, tools ? stdenv.cc +, version ? null +}: + +with lib; + +let compcert = mkCoqDerivation rec { + + pname = "compcert"; + owner = "AbsInt"; + + inherit version; + releaseRev = v: "v${v}"; + + defaultVersion = with versions; switch coq.version [ + { case = range "8.8" "8.11"; out = "3.8"; } + { case = range "8.12" "8.13"; out = "3.9"; } + ] null; + + release = { + "3.8".sha256 = "1gzlyxvw64ca12qql3wnq3bidcx9ygsklv9grjma3ib4hvg7vnr7"; + "3.9".sha256 = "1srcz2dqrvmbvv5cl66r34zqkm0hsbryk7gd3i9xx4slahc9zvdb"; + }; + + nativeBuildInputs = [ makeWrapper ]; + buildInputs = with ocamlPackages; [ ocaml findlib menhir menhirLib ] ++ [ coq coq2html ]; + propagatedBuildInputs = [ flocq ]; + + enableParallelBuilding = true; + + postPatch = '' + substituteInPlace ./configure \ + --replace \$\{toolprefix\}ar 'ar' \ + --replace '{toolprefix}gcc' '{toolprefix}cc' + ''; + + configurePhase = '' + ./configure -clightgen \ + -prefix $out \ + -coqdevdir $lib/lib/coq/${coq.coq-version}/user-contrib/compcert/ \ + -toolprefix ${tools}/bin/ \ + -use-external-Flocq \ + ${if stdenv.isDarwin then "x86_64-macosx" else "x86_64-linux"} + ''; + + installTargets = "documentation install"; + postInstall = '' + # move man into place + mkdir -p $man/share + mv $out/share/man/ $man/share/ + + # move docs into place + mkdir -p $doc/share/doc/compcert + mv doc/html $doc/share/doc/compcert/ + + # wrap ccomp to undefine _FORTIFY_SOURCE; ccomp invokes cc1 which sets + # _FORTIFY_SOURCE=2 by default, but undefines __GNUC__ (as it should), + # which causes a warning in libc. this suppresses it. + for x in ccomp clightgen; do + wrapProgram $out/bin/$x --add-flags "-U_FORTIFY_SOURCE" + done + ''; + + outputs = [ "out" "lib" "doc" "man" ]; + + meta = with lib; { + description = "Formally verified C compiler"; + homepage = "https://compcert.org"; + license = licenses.inria-compcert; + platforms = [ "x86_64-linux" "x86_64-darwin" ]; + maintainers = with maintainers; [ thoughtpolice jwiegley vbgl ]; + }; +}; in +compcert.overrideAttrs (o: + { + patches = with versions; switch [ coq.version o.version ] [ + { cases = [ (range "8.12.2" "8.13.2") "3.8" ]; + out = [ + # Support for Coq 8.12.2 + (fetchpatch { + url = "https://github.com/AbsInt/CompCert/commit/06956421b4307054af221c118c5f59593c0e67b9.patch"; + sha256 = "1f90q6j3xfvnf3z830bkd4d8526issvmdlrjlc95bfsqs78i1yrl"; + }) + # Support for Coq 8.13.0 + (fetchpatch { + url = "https://github.com/AbsInt/CompCert/commit/0895388e7ebf9c9f3176d225107e21968919fb97.patch"; + sha256 = "0qhkzgb2xl5kxys81pldp3mr39gd30lvr2l2wmplij319vp3xavd"; + }) + # Support for Coq 8.13.1 + (fetchpatch { + url = "https://github.com/AbsInt/CompCert/commit/6bf310dd678285dc193798e89fc2c441d8430892.patch"; + sha256 = "026ahhvpj5pksy90f8pnxgmhgwfqk4kwyvcf8x3dsanvz98d4pj5"; + }) + # Drop support for Coq < 8.9 + (fetchpatch { + url = "https://github.com/AbsInt/CompCert/commit/7563a5df926a4c6fb1489a7a4c847641c8a35095.patch"; + sha256 = "05vkslzy399r3dm6dmjs722rrajnyfa30xsyy3djl52isvn4gyfb"; + }) + # Support for Coq 8.13.2 + (fetchpatch { + url = "https://github.com/AbsInt/CompCert/commit/48bc183167c4ce01a5c9ea86e49d60530adf7290.patch"; + sha256 = "0j62lppfk26d1brdp3qwll2wi4gvpx1k70qivpvby5f7dpkrkax1"; + }) + ]; + } + ] []; + } +) diff --git a/third_party/nixpkgs/pkgs/development/coq-modules/reglang/default.nix b/third_party/nixpkgs/pkgs/development/coq-modules/reglang/default.nix new file mode 100644 index 0000000000..bc18108264 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/coq-modules/reglang/default.nix @@ -0,0 +1,25 @@ +{ lib, mkCoqDerivation, coq, ssreflect, version ? null }: +with lib; + +mkCoqDerivation { + pname = "reglang"; + + releaseRev = v: "v${v}"; + + release."1.1.2".sha256 = "sha256-SEnMilLNxh6a3oiDNGLaBr8quQ/nO2T9Fwdf/1il2Yk="; + + inherit version; + defaultVersion = with versions; switch coq.coq-version [ + { case = range "8.10" "8.13"; out = "1.1.2"; } + ] null; + + + propagatedBuildInputs = [ ssreflect ]; + + meta = { + description = "Regular Language Representations in Coq"; + maintainers = with maintainers; [ siraben ]; + license = licenses.cecill-b; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/gnuradio-modules/ais/default.nix b/third_party/nixpkgs/pkgs/development/gnuradio-modules/ais/default.nix index 5ff4ffd756..638210f841 100644 --- a/third_party/nixpkgs/pkgs/development/gnuradio-modules/ais/default.nix +++ b/third_party/nixpkgs/pkgs/development/gnuradio-modules/ais/default.nix @@ -8,18 +8,22 @@ , cppunit , log4cpp , osmosdr +, gmp +, mpir +, fftwFloat +, icu }: mkDerivation rec { pname = "gr-ais"; - version = "2015-12-20"; + version = "2020-08-13"; src = fetchFromGitHub { owner = "bistromath"; repo = "gr-ais"; - rev = "cdc1f52745853f9c739c718251830eb69704b26e"; - sha256 = "1vl3kk8xr2mh5lf31zdld7yzmwywqffffah8iblxdzblgsdwxfl6"; + rev = "2162103226f3dae43c8c2ab23b79483b84346665"; + sha256 = "1vackka34722d8pcspfwj0j6gc9ic7dqq64sgkrpjm94sh3bmb0b"; }; - disabledForGRafter = "3.8"; + disabledForGRafter = "3.9"; nativeBuildInputs = [ cmake @@ -32,6 +36,10 @@ mkDerivation rec { osmosdr boost log4cpp + gmp + mpir + fftwFloat + icu ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/guile-modules/guile-gcrypt/default.nix b/third_party/nixpkgs/pkgs/development/guile-modules/guile-gcrypt/default.nix new file mode 100644 index 0000000000..73152fb9d2 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/guile-modules/guile-gcrypt/default.nix @@ -0,0 +1,45 @@ +{ lib +, stdenv +, fetchFromGitea +, guile +, libgcrypt +, autoreconfHook +, pkg-config +, texinfo +}: + +stdenv.mkDerivation rec { + pname = "guile-gcrypt"; + version = "0.3.0"; + + src = fetchFromGitea { + domain = "notabug.org"; + owner = "cwebber"; + repo = "guile-gcrypt"; + rev = "v${version}"; + sha256 = "sha256-lAaiKBOdTFWEWsmwKgx0C67ACvtnEKUxti66dslzSVQ="; + }; + + postConfigure = '' + sed -i '/moddir\s*=/s%=.*%=''${out}/share/guile/site%' Makefile; + sed -i '/godir\s*=/s%=.*%=''${out}/share/guile/ccache%' Makefile; + ''; + + nativeBuildInputs = [ + autoreconfHook pkg-config texinfo + ]; + buildInputs = [ + guile + ]; + propagatedBuildInputs = [ + libgcrypt + ]; + + meta = with lib; { + description = "Bindings to Libgcrypt for GNU Guile"; + homepage = "https://notabug.org/cwebber/guile-gcrypt"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ ethancedwards8 ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/guile-modules/guile-git/default.nix b/third_party/nixpkgs/pkgs/development/guile-modules/guile-git/default.nix new file mode 100644 index 0000000000..254afae0cc --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/guile-modules/guile-git/default.nix @@ -0,0 +1,48 @@ +{ lib +, stdenv +, fetchFromGitLab +, guile +, libgit2 +, scheme-bytestructures +, autoreconfHook +, pkg-config +, texinfo +}: + +stdenv.mkDerivation rec { + pname = "guile-git"; + version = "0.5.1"; + + src = fetchFromGitLab { + owner = "guile-git"; + repo = pname; + rev = "v${version}"; + sha256 = "7Cnuyk9xAPTvz9R44O3lvKDrT6tUQui7YzxIoqhRfPQ="; + }; + + postConfigure = '' + sed -i '/moddir\s*=/s%=.*%=''${out}/share/guile/site%' Makefile; + sed -i '/godir\s*=/s%=.*%=''${out}/share/guile/ccache%' Makefile; + ''; + + nativeBuildInputs = [ + autoreconfHook pkg-config texinfo + ]; + buildInputs = [ + guile + ]; + propagatedBuildInputs = [ + libgit2 scheme-bytestructures + ]; + + enableParallelBuilding = true; + + meta = with lib; { + description = "Bindings to Libgit2 for GNU Guile"; + homepage = "https://gitlab.com/guile-git/guile-git"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ ethancedwards8 ]; + platforms = platforms.linux; + }; +} + diff --git a/third_party/nixpkgs/pkgs/development/guile-modules/guile-json/default.nix b/third_party/nixpkgs/pkgs/development/guile-modules/guile-json/default.nix new file mode 100644 index 0000000000..5433bbb1aa --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/guile-modules/guile-json/default.nix @@ -0,0 +1,39 @@ +{ lib +, stdenv +, fetchurl +, guile +, texinfo +, pkg-config +}: + +stdenv.mkDerivation rec { + pname = "guile-json"; + version = "4.5.2"; + + src = fetchurl { + url = "mirror://savannah/guile-json/${pname}-${version}.tar.gz"; + sha256 = "GrBG7DaxxEwEGsJ1Vo2Bh4TXH6uaXZX5Eoz+iiUFGTM="; + }; + + postConfigure = '' + sed -i '/moddir\s*=/s%=.*%=''${out}/share/guile/site%' Makefile; + sed -i '/objdir\s*=/s%=.*%=''${out}/share/guile/ccache%' Makefile; + sed -i '/moddir\s*=/s%=.*%=''${out}/share/guile/site/json%' json/Makefile; + sed -i '/objdir\s*=/s%=.*%=''${out}/share/guile/ccache/json%' json/Makefile; + ''; + + nativeBuildInputs = [ + pkg-config texinfo + ]; + buildInputs = [ + guile + ]; + + meta = with lib; { + description = "JSON Bindings for GNU Guile"; + homepage = "https://savannah.nongnu.org/projects/guile-json"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ ethancedwards8 ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/guile-modules/guile-ssh/default.nix b/third_party/nixpkgs/pkgs/development/guile-modules/guile-ssh/default.nix new file mode 100644 index 0000000000..b7e742384d --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/guile-modules/guile-ssh/default.nix @@ -0,0 +1,51 @@ +{ lib +, stdenv +, fetchFromGitHub +, guile +, libssh +, autoreconfHook +, pkg-config +, texinfo +, which +}: + +stdenv.mkDerivation rec { + pname = "guile-ssh"; + version = "0.13.1"; + + src = fetchFromGitHub { + owner = "artyom-poptsov"; + repo = pname; + rev = "v${version}"; + sha256 = "LzTR1QuK3mle0Q6a4YRn9ZTkcs1sygYKoezxI9+e/fY="; + }; + + configureFlags = [ "--with-guilesitedir=\${out}/share/guile/site" ]; + + postFixup = '' + for f in $out/share/guile/site/ssh/**.scm; do \ + substituteInPlace $f \ + --replace "libguile-ssh" "$out/lib/libguile-ssh"; \ + done + ''; + + nativeBuildInputs = [ + autoreconfHook pkg-config texinfo which + ]; + buildInputs = [ + guile + ]; + propagatedBuildInputs = [ + libssh + ]; + + enableParallelBuilding = true; + + meta = with lib; { + description = "Bindings to Libssh for GNU Guile"; + homepage = "https://github.com/artyom-poptsov/guile-ssh"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ ethancedwards8 ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/HACKING.md b/third_party/nixpkgs/pkgs/development/haskell-modules/HACKING.md index 7c46e1560f..1161bd828f 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/HACKING.md +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/HACKING.md @@ -1,5 +1,5 @@ -## Maintainer Workflow +# Maintainer Workflow The goal of the [@NixOS/haskell](https://github.com/orgs/NixOS/teams/haskell) team is to keep the Haskell packages in Nixpkgs up-to-date, while making sure @@ -20,7 +20,7 @@ The workflow generally proceeds in three main steps: Each of these steps is described in a separate section. -### Initial `haskell-updates` PR +## Initial `haskell-updates` PR In this section we create the PR for merging `haskell-updates` into `master`. @@ -44,11 +44,13 @@ In this section we create the PR for merging `haskell-updates` into `master`. $ ./maintainers/scripts/haskell/regenerate-hackage-packages.sh --do-commit ``` -1. Push these commits to the Nixpkgs repository. +1. Push these commits to the `haskell-updates` branch of the NixOS/nixpkgs repository. 1. Open a PR on Nixpkgs merging `haskell-updates` into `master`. -Use the following message body: + + +Use the title `haskellPackages: update stackage and hackage` and the following message body: ```markdown ### This Merge @@ -68,8 +70,8 @@ The short version is this: * We regularly update the Stackage and Hackage pins on `haskell-updates` (normally at the beginning of a merge window). * The community fixes builds of Haskell packages on that branch. * We aim at at least one merge of `haskell-updates` into `master` every two weeks. -* We only do the merge if the `mergeable` job is succeeding on hydra. -* If a maintained package is still broken at the time of merge, we will only merge if the maintainer has been pinged 7 days in advance. (If you care about a Haskell package, become a maintainer!) +* We only do the merge if the [`mergeable`](https://hydra.nixos.org/job/nixpkgs/haskell-updates/mergeable) job is succeeding on hydra. +* If a [`maintained`](https://hydra.nixos.org/job/nixpkgs/haskell-updates/maintained) package is still broken at the time of merge, we will only merge if the maintainer has been pinged 7 days in advance. (If you care about a Haskell package, become a maintainer!) --- @@ -78,14 +80,14 @@ This is the follow-up to #TODO. Make sure to replace all TODO with the actual values. -### Notify Maintainers and Fix Broken Packages +## Notify Maintainers and Fix Broken Packages After you've done the previous steps, Hydra will start building the new and updated Haskell packages. You can see the progress Hydra is making at https://hydra.nixos.org/jobset/nixpkgs/haskell-updates. This Hydra jobset is defined in the file [release-haskell.nix](../../top-level/release-haskell.nix). -#### Notify Maintainers +### Notify Maintainers When Hydra finishes building all the updated packages for the `haskell-updates` jobset, you should generate a build report to notify maintainers of their @@ -112,10 +114,12 @@ Maintainers should be given at least 7 days to fix up their packages when they break. If maintainers don't fix up their packages with 7 days, then they may be marked broken before merging `haskell-updates` into `master`. -#### Fix Broken Packages +### Fix Broken Packages After getting the build report, you can see which packages and Hydra jobs are -failing to build. The most important jobs are the `maintained` and `mergeable` +failing to build. The most important jobs are the +[`maintained`](https://hydra.nixos.org/job/nixpkgs/haskell-updates/maintained) and +[`mergeable`](https://hydra.nixos.org/job/nixpkgs/haskell-updates/mergeable) jobs. These are both defined in [`release-haskell.nix`](../../top-level/release-haskell.nix). @@ -131,7 +135,7 @@ Steps to fix Haskell packages that are failing to build is out of scope for this document, but it usually requires fixing up dependencies that are now out-of-bounds. -#### Mark Broken Packages +### Mark Broken Packages Packages that do not get fixed can be marked broken with the following commands. First check which packages are broken: @@ -176,7 +180,7 @@ following will happen: - All updated files will be committed. -#### Merge `master` into `haskell-updates` +### Merge `master` into `haskell-updates` You should occasionally merge the `master` branch into the `haskell-updates` branch. @@ -194,7 +198,7 @@ This is especially important after `staging-next` is merged into `master`, since there is a high chance that this will cause all the Haskell packages to rebuild. -### Merge `haskell-updates` into `master` +## Merge `haskell-updates` into `master` Now it is time to merge the `haskell-updates` PR you opened above. @@ -213,15 +217,35 @@ Before doing this, make sure of the following: for Hydra to evaluate the new `haskell-updates` jobset. Make sure you only merge `haskell-updates` into `master` when there are no evaluation errors. +- Due to Hydra having only a small number of Darwin build machines, the + `haskell-updates` jobset on Hydra often has many queued Darwin jobs. + In order to not have these queued Darwin jobs prevent the `haskell-updates` + branch from being merged to `master` in a timely manner, we have special + rules for Darwin jobs. + + - It is alright to merge the `haskell-updates` branch to `master` if + there are remaining queued Darwin jobs on Hydra. + + - We would like to keep GHC and the `mergeable` job building on Darwin. + Do not merge the `haskell-updates` branch to `master` if GHC is failing + to build, or the `mergeable` job has failing Darwin constituent jobs. + + If GHC and the `mergeable` job are not failing, but merely queued, + it is alright to merge the `haskell-updates` branch to `master`. + + - We do not need to keep the `maintained` job building on Darwin. + If `maintained` packages are failing on Darwin, it is helpful to + mark them as broken on that platform. + When you've double-checked these points, go ahead and merge the `haskell-updates` PR. After merging, **make sure not to delete the `haskell-updates` branch**, since it causes all currently open Haskell-related pull-requests to be automatically closed on GitHub. -### Additional Info +## Additional Info Here are some additional tips that didn't fit in above. -- Hydra tries to evalute the `haskell-updates` branch (in the +- Hydra tries to evaluate the `haskell-updates` branch (in the [`nixpkgs:haskell-updates`](https://hydra.nixos.org/jobset/nixpkgs/haskell-updates) jobset) every 4 hours. It is possible to force a new Hydra evaluation without waiting 4 hours by the following steps: @@ -263,8 +287,3 @@ Here are some additional tips that didn't fit in above. - The Haskell team members generally hang out in the Matrix room [#haskell:nixos.org](https://matrix.to/#/#haskell:nixos.org). - -## Contributor Workflow - -(TODO: this section is to describe the type of workflow for non-committers to -contribute to `haskell-updates`) diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/cabal2nix-unstable.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/cabal2nix-unstable.nix index 00bd9061f0..8b058b2dc0 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/cabal2nix-unstable.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/cabal2nix-unstable.nix @@ -8,10 +8,10 @@ }: mkDerivation { pname = "cabal2nix"; - version = "unstable-2021-05-28"; + version = "unstable-2021-06-12"; src = fetchzip { - url = "https://github.com/NixOS/cabal2nix/archive/5fb325e094af91328e02cc2ecfd211feaeb135a7.tar.gz"; - sha256 = "1zbd336s99rgk24yjqlp012d0f66s5nf190sjmsl7mfhqx9j2y4l"; + url = "https://github.com/NixOS/cabal2nix/archive/01feffa0aeee835504e0c0ccf4bca2e33a698252.tar.gz"; + sha256 = "0clckh0qqvjcb8szy1d6qqlxj6sqp28jc2p3vhzhkf95cv491si9"; }; isLibrary = true; isExecutable = true; diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-arm.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-arm.nix index b9f868b04c..550b976a5c 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-arm.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-arm.nix @@ -43,50 +43,52 @@ self: super: { # Doctests fail on aarch64 due to a GHCi linking bug # https://gitlab.haskell.org/ghc/ghc/-/issues/15275#note_295437 # TODO: figure out if needed on aarch32 as well - language-nix = dontCheck super.language-nix; - trifecta = dontCheck super.trifecta; - ad = dontCheck super.ad; - vinyl = dontCheck super.vinyl; BNFC = dontCheck super.BNFC; C-structs = dontCheck super.C-structs; accelerate = dontCheck super.accelerate; - focuslist = dontCheck super.focuslist; - flight-kml = dontCheck super.flight-kml; - exact-real = dontCheck super.exact-real; + ad = dontCheck super.ad; autoapply = dontCheck super.autoapply; - hint = dontCheck super.hint; - hgeometry = dontCheck super.hgeometry; - headroom = dontCheck super.headroom; + construct = dontCheck super.construct; + exact-real = dontCheck super.exact-real; + flight-kml = dontCheck super.flight-kml; + focuslist = dontCheck super.focuslist; + grammatical-parsers = dontCheck super.grammatical-parsers; + greskell = dontCheck super.greskell; + groupBy = dontCheck super.groupBy; haskell-time-range = dontCheck super.haskell-time-range; + headroom = dontCheck super.headroom; + hgeometry = dontCheck super.hgeometry; + hhp = dontCheck super.hhp; + hint = dontCheck super.hint; + hls-splice-plugin = dontCheck super.hls-splice-plugin; hsakamai = dontCheck super.hsakamai; hsemail-ns = dontCheck super.hsemail-ns; - openapi3 = dontCheck super.openapi3; - strict-writer = dontCheck super.strict-writer; - xml-html-qq = dontCheck super.xml-html-qq; - static = dontCheck super.static; - hhp = dontCheck super.hhp; - groupBy = dontCheck super.groupBy; - greskell = dontCheck super.greskell; html-validator-cli = dontCheck super.html-validator-cli; hw-fingertree-strict = dontCheck super.hw-fingertree-strict; - hw-prim = dontCheck super.hw-prim; hw-packed-vector = dontCheck super.hw-packed-vector; + hw-prim = dontCheck super.hw-prim; hw-xml = dontCheck super.hw-xml; + language-nix = dontCheck super.language-nix; lens-regex = dontCheck super.lens-regex; meep = dontCheck super.meep; + openapi3 = dontCheck super.openapi3; + orbits = dontCheck super.orbits; ranged-list = dontCheck super.ranged-list; rank2classes = dontCheck super.rank2classes; schedule = dontCheck super.schedule; + static = dontCheck super.static; + strict-writer = dontCheck super.strict-writer; + termonad = dontCheck super.termonad; + trifecta = dontCheck super.trifecta; twiml = dontCheck super.twiml; twitter-conduit = dontCheck super.twitter-conduit; validationt = dontCheck super.validationt; vgrep = dontCheck super.vgrep; + vinyl = dontCheck super.vinyl; vulkan-utils = dontCheck super.vulkan-utils; + xml-html-qq = dontCheck super.xml-html-qq; yaml-combinators = dontCheck super.yaml-combinators; yesod-paginator = dontCheck super.yesod-paginator; - grammatical-parsers = dontCheck super.grammatical-parsers; - construct = dontCheck super.construct; - orbits = dontCheck super.orbits; # https://github.com/ekmett/half/issues/35 half = dontCheck super.half; diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-common.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-common.nix index 5cc0a3e79c..1c3cbbbbe3 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-common.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-common.nix @@ -64,7 +64,14 @@ self: super: { name = "git-annex-${super.git-annex.version}-src"; url = "git://git-annex.branchable.com/"; rev = "refs/tags/" + super.git-annex.version; - sha256 = "1wig8nw2rxgq86y88m1f1qf93z5yckidf1cs33ribmhqa1hs300p"; + sha256 = "1hf2i36ayscdg7fa81akx031chg8c3scbjphj4c1qawif41bynmm"; + # delete android and Android directories which cause issues on + # darwin (case insensitive directory). Since we don't need them + # during the build process, we can delete it to prevent a hash + # mismatch on darwin. + postFetch = '' + rm -r $out/doc/?ndroid* + ''; }; }).override { dbus = if pkgs.stdenv.isLinux then self.dbus else null; @@ -203,12 +210,11 @@ self: super: { sha256 = "0pqmijfkysjixg3gb4kmrqdif7s2saz8qi6k337jf15i0npzln8d"; revert = true; }) - # fix broken location annotations (necessary for update-nix-fetchgit). - # Can be removed on the next hnix release after - # https://github.com/haskell-nix/hnix/pull/936 is merged. + # allow relude < 1.0 again (pkgs.fetchpatch { - url = "https://github.com/expipiplus1/hnix/commit/7cd998426ab7d930d288a1d6e266dc4e85cece3d.patch"; - sha256 = "19ay6vxa90ykgdd0fis2djvki2kpgfsq7z55iyqg965m583vsfr6"; + url = "https://github.com/haskell-nix/hnix/commit/f4ea5dcb344369916586498ba33c00d0fc605a79.patch"; + sha256 = "1ajl7d49d658xhalgf3pc5svmbq73dsysy6z434n75vb1357mx86"; + revert = true; }) ] ++ (drv.patches or []); # make sure patches are not broken by cabal file revisions @@ -479,10 +485,11 @@ self: super: { doctest-discover = dontCheck super.doctest-discover; # Depends on itself for testing - tasty-discover = addBuildTool super.tasty-discover - (if pkgs.buildPlatform != pkgs.hostPlatform - then self.buildHaskellPackages.tasty-discover - else dontCheck super.tasty-discover); + tasty-discover = overrideCabal super.tasty-discover (drv: { + preBuild = '' + export PATH="$PWD/dist/build/tasty-discover:$PATH" + '' + (drv.preBuild or ""); + }); # Known issue with nondeterministic test suite failure # https://github.com/nomeata/tasty-expected-failure/issues/21 @@ -564,7 +571,7 @@ self: super: { preCheck = "export HOME=$TMPDIR"; testToolDepends = drv.testToolDepends or [] ++ [self.cabal-install]; doCheck = false; # https://github.com/kazu-yamamoto/ghc-mod/issues/335 - executableToolDepends = drv.executableToolDepends or [] ++ [pkgs.emacs]; + executableToolDepends = drv.executableToolDepends or [] ++ [pkgs.buildPackages.emacs]; postInstall = '' local lispdir=( "$data/share/${self.ghc.name}/*/${drv.pname}-${drv.version}/elisp" ) make -C $lispdir @@ -699,21 +706,24 @@ self: super: { uuid-types = doJailbreak super.uuid-types; uuid = doJailbreak super.uuid; + # Bypass version check for random < 1.2 (1.2 works fine). + # https://github.com/yeyan/xmonad-wallpaper/issues/2 + xmonad-wallpaper = doJailbreak super.xmonad-wallpaper; + # The tests spuriously fail libmpd = dontCheck super.libmpd; - # 2021-03-12: All of this libraries have to restrictive upper bounds - # https://github.com/diagrams/diagrams-core/issues/112 - active = doJailbreak super.active; - statestack = doJailbreak super.statestack; - force-layout = doJailbreak super.force-layout; + # Too strict bounds on template-haskell (doesn't allow 2.16) + # For 2.17 support: https://github.com/JonasDuregard/sized-functors/pull/10 size-based = doJailbreak super.size-based; + + # Remove as soon as we update to monoid-extras 0.6 and unpin these packages dual-tree = doJailbreak super.dual-tree; diagrams-core = doJailbreak super.diagrams-core; - diagrams-postscript = doJailbreak super.diagrams-postscript; - diagrams-svg = doJailbreak super.diagrams-svg; - diagrams-contrib = doJailbreak super.diagrams-contrib; - # apply patch from master to add compat with optparse-applicative >= 0.16 + + # Apply patch from master to add compat with optparse-applicative >= 0.16. + # We unfortunately can't upgrade to 1.4.4 which includes this patch yet + # since it would require monoid-extras 0.6 which breaks other diagrams libs. diagrams-lib = doJailbreak (appendPatch super.diagrams-lib (pkgs.fetchpatch { url = "https://github.com/diagrams/diagrams-lib/commit/4b9842c3e3d653be69af19778970337775e2404d.patch"; @@ -721,6 +731,9 @@ self: super: { includes = [ "*/CmdLine.hs" ]; })); + # https://github.com/diagrams/diagrams-solve/issues/4 + diagrams-solve = dontCheck super.diagrams-solve; + # https://github.com/danidiaz/streaming-eversion/issues/1 streaming-eversion = dontCheck super.streaming-eversion; @@ -737,9 +750,6 @@ self: super: { # Has a dependency on outdated versions of directory. cautious-file = doJailbreak (dontCheck super.cautious-file); - # https://github.com/diagrams/diagrams-solve/issues/4 - diagrams-solve = dontCheck super.diagrams-solve; - # test suite does not compile with recent versions of QuickCheck integer-logarithms = dontCheck (super.integer-logarithms); @@ -754,7 +764,7 @@ self: super: { # $PATH. Also, cryptol needs a version of sbl that's newer than what we have # in LTS-13.x. cryptol = overrideCabal super.cryptol (drv: { - buildTools = drv.buildTools or [] ++ [ pkgs.makeWrapper ]; + buildTools = drv.buildTools or [] ++ [ pkgs.buildPackages.makeWrapper ]; postInstall = drv.postInstall or "" + '' for b in $out/bin/cryptol $out/bin/cryptol-html; do wrapProgram $b --prefix 'PATH' ':' "${pkgs.lib.getBin pkgs.z3}/bin" @@ -777,7 +787,10 @@ self: super: { # Needs pginit to function and pgrep to verify. tmp-postgres = overrideCabal super.tmp-postgres (drv: { - libraryToolDepends = drv.libraryToolDepends or [] ++ [pkgs.postgresql]; + preCheck = '' + export HOME="$TMPDIR" + '' + (drv.preCheck or ""); + libraryToolDepends = drv.libraryToolDepends or [] ++ [pkgs.buildPackages.postgresql]; testToolDepends = drv.testToolDepends or [] ++ [pkgs.procps]; }); @@ -1158,6 +1171,11 @@ self: super: { url = "https://github.com/jaspervdj/hakyll/commit/af9e29b5456c105dc948bc46c93e989a650b5ed1.patch"; sha256 = "sha256-ghc0V5L9OybNHWKmM0vhjRBN2rIvDlp+ClcK/aQst44="; }) + # Remove when Hakyll > 4.14.0.0 + (pkgs.fetchpatch { + url = "https://github.com/jaspervdj/hakyll/commit/e0c63558a82ac4347181d5d77dce7f763a1db410.patch"; + sha256 = "sha256-wYlxJmq56YQ29vpVsQhO+JdL0GBezCAfkdhIdFnLYsc="; + }) ]; })); @@ -1186,7 +1204,7 @@ self: super: { EdisonAPI = appendPatch super.EdisonAPI (pkgs.fetchpatch { url = "https://github.com/robdockins/edison/pull/16/commits/8da6c0f7d8666766e2f0693425c347c0adb492dc.patch"; postFetch = '' - ${pkgs.patchutils}/bin/filterdiff --include='a/edison-api/*' --strip=1 "$out" > "$tmpfile" + ${pkgs.buildPackages.patchutils}/bin/filterdiff --include='a/edison-api/*' --strip=1 "$out" > "$tmpfile" mv "$tmpfile" "$out" ''; sha256 = "0yi5pz039lcm4pl9xnl6krqxyqq5rgb5b6m09w0sfy06x0n4x213"; @@ -1195,7 +1213,7 @@ self: super: { EdisonCore = appendPatch super.EdisonCore (pkgs.fetchpatch { url = "https://github.com/robdockins/edison/pull/16/commits/8da6c0f7d8666766e2f0693425c347c0adb492dc.patch"; postFetch = '' - ${pkgs.patchutils}/bin/filterdiff --include='a/edison-core/*' --strip=1 "$out" > "$tmpfile" + ${pkgs.buildPackages.patchutils}/bin/filterdiff --include='a/edison-core/*' --strip=1 "$out" > "$tmpfile" mv "$tmpfile" "$out" ''; sha256 = "097wqn8hxsr50b9mhndg5pjim5jma2ym4ylpibakmmb5m98n17zp"; @@ -1274,40 +1292,15 @@ self: super: { # Fixed upstream but not released to Hackage yet: # https://github.com/k0001/hs-libsodium/issues/2 libsodium = overrideCabal super.libsodium (drv: { - libraryToolDepends = (drv.libraryToolDepends or []) ++ [self.c2hs]; + libraryToolDepends = (drv.libraryToolDepends or []) ++ [self.buildHaskellPackages.c2hs]; }); # https://github.com/kowainik/policeman/issues/57 policeman = doJailbreak super.policeman; - # nixpkgs has bumped gdkpixbuf C lib, so we need gi-gdkpixbuf_2_0_26 to link against that. - # This leads to all this bumps which can be removed once stackage has haskell-gi 0.25. - haskell-gi = self.haskell-gi_0_25_0; - haskell-gi-base = addBuildDepends super.haskell-gi-base_0_25_0 [ pkgs.gobject-introspection ]; - gi-glib = self.gi-glib_2_0_25; - gi-cairo = self.gi-cairo_1_0_25; - gi-gobject = self.gi-gobject_2_0_26; - gi-atk = self.gi-atk_2_0_23; - gi-gio = self.gi-gio_2_0_28; - gi-harfbuzz = self.gi-harfbuzz_0_0_4; - gi-javascriptcore = self.gi-javascriptcore_4_0_23; - gi-pango = self.gi-pango_1_0_24; - gi-soup = self.gi-soup_2_4_24; - gi-gdkpixbuf = self.gi-gdkpixbuf_2_0_26; - gi-gdk = self.gi-gdk_3_0_24; - gi-gtk = self.gi-gtk_3_0_37; - gi-webkit2 = self.gi-webkit2_4_0_27; + # Too strict version bounds on haskell-gi gi-cairo-render = doJailbreak super.gi-cairo-render; gi-cairo-connector = doJailbreak super.gi-cairo-connector; - gi-gtk-hs = self.gi-gtk-hs_0_3_10; - gi-dbusmenu = self.gi-dbusmenu_0_4_9; - gi-xlib = self.gi-xlib_2_0_10; - gi-gdkx11 = self.gi-gdkx11_3_0_11; - gi-dbusmenugtk3 = self.gi-dbusmenugtk3_0_4_10; - - # 2021-05-17: Needs some manual patching to be compatible with haskell-gi-base 0.25 - # Created upstream PR @ https://github.com/ghcjs/jsaddle/pull/119 - jsaddle-webkit2gtk = appendPatch super.jsaddle-webkit2gtk ./patches/jsaddle-webkit2gtk.patch; # Missing -Iinclude parameter to doc-tests (pull has been accepted, so should be resolved when 0.5.3 released) # https://github.com/lehins/massiv/pull/104 @@ -1392,28 +1385,12 @@ self: super: { update-nix-fetchgit = let deps = [ pkgs.git pkgs.nix pkgs.nix-prefetch-git ]; in generateOptparseApplicativeCompletion "update-nix-fetchgit" (overrideCabal (addTestToolDepends super.update-nix-fetchgit deps) (drv: { - buildTools = drv.buildTools or [ ] ++ [ pkgs.makeWrapper ]; + buildTools = drv.buildTools or [ ] ++ [ pkgs.buildPackages.makeWrapper ]; postInstall = drv.postInstall or "" + '' wrapProgram "$out/bin/update-nix-fetchgit" --prefix 'PATH' ':' "${ pkgs.lib.makeBinPath deps }" ''; - - # These can both be removed upon the release of update-nix-fetchgit-0.2.7 - patches = [ - # 2021-05-17 compile with hnix >= 0.13 - # https://github.com/expipiplus1/update-nix-fetchgit/pull/64 - (pkgs.fetchpatch { - url = "https://github.com/expipiplus1/update-nix-fetchgit/commit/bc28c8b26c38093aa950574802012c0cd8447ce8.patch"; - sha256 = "1dwd1jdsrx3ss6ql1bk2ch7ln74mkq6jy9ms8vi8kmf3gbg8l9fg"; - }) - # Fix test failure - # https://github.com/expipiplus1/update-nix-fetchgit/pull/60 - (pkgs.fetchpatch { - url = "https://github.com/expipiplus1/update-nix-fetchgit/commit/4a43e1ea4e7e1c18de81e3f9fe0b86faa70865f5.patch"; - sha256 = "1z74c1blgwr4q37m1rhlj7534qbnp3nnxf63m8j2b7iz0ljgm0m9"; - }) - ] ++ (drv.patches or []); })); # Our quickcheck-instances is too old for the newer binary-instances, but @@ -1425,39 +1402,16 @@ self: super: { # https://github.com/haskell/haskell-language-server/issues/611 haskell-language-server = dontCheck super.haskell-language-server; - # 2021-05-08: Tests fail: https://github.com/haskell/haskell-language-server/issues/1808 - hls-splice-plugin = dontCheck super.hls-splice-plugin; - # 2021-05-08: Tests fail: https://github.com/haskell/haskell-language-server/issues/1809 hls-eval-plugin = dontCheck super.hls-eval-plugin; - # 2021-03-19: Too restrictive upper bound on optparse-applicative - stylish-haskell = doJailbreak super.stylish-haskell; - - # 2021-03-19: https://github.com/facebookincubator/retrie/issues/24 - retrie = doJailbreak super.retrie; - - # Jailbreak because of restrictive upper bound on base16-bytestring - # 2021-03-19: https://github.com/Avi-D-coder/implicit-hie-cradle/pull/8 - implicit-hie-cradle = doJailbreak super.implicit-hie-cradle; + # 2021-06-20: Tests fail: https://github.com/haskell/haskell-language-server/issues/1949 + hls-refine-imports-plugin = dontCheck super.hls-refine-imports-plugin; # 2021-03-09: Golden tests seem to be missing in hackage release: # https://github.com/haskell/haskell-language-server/issues/1536 hls-tactics-plugin = dontCheck (super.hls-tactics-plugin.override { refinery = self.refinery_0_3_0_0; }); - # 2021-03-24: hlint 3.3 is for ghc 9 compat, but hls only supports ghc 8.10 - hls-hlint-plugin = super.hls-hlint-plugin.override { - hlint = super.hlint_3_2_7; - }; - - # hlint 3.3 needs a ghc-lib-parser newer than the one from stackage - hlint = super.hlint.overrideScope (self: super: { - ghc-lib-parser = overrideCabal self.ghc-lib-parser_9_0_1_20210324 { - doHaddock = false; - }; - ghc-lib-parser-ex = self.ghc-lib-parser-ex_9_0_0_4; - }); - # 2021-03-21 Test hangs # https://github.com/haskell/haskell-language-server/issues/1562 # Jailbreak because of: https://github.com/haskell/haskell-language-server/pull/1595 @@ -1519,8 +1473,6 @@ self: super: { # 2020-11-19: Jailbreaking until: https://github.com/snapframework/snap/pull/219 snap = doJailbreak super.snap; - cachix = generateOptparseApplicativeCompletion "cachix" super.cachix; - # 2020-11-23: Jailbreaking until: https://github.com/michaelt/text-pipes/pull/29 pipes-text = doJailbreak super.pipes-text; @@ -1534,20 +1486,7 @@ self: super: { # Upstream issue: https://github.com/haskell-servant/servant-swagger/issues/129 servant-swagger = dontCheck super.servant-swagger; - hercules-ci-agent = super.hercules-ci-agent.override { - cachix = - # https://github.com/cachix/cachix/pull/361 - (appendPatch - (addBuildDepend super.cachix super.hercules-ci-cnix-store) - (pkgs.fetchpatch { - name = "cachix-361.patch"; - url = "https://patch-diff.githubusercontent.com/raw/cachix/cachix/pull/361.patch"; - sha256 = "0wwlcpmnqmvk1css5f723dzgjvg4jr7i58ifhni5zg9h5iwycdfr"; - stripLen = 1; - includes = ["*.cabal" "*.hs"]; - }) - ); - }; + hercules-ci-agent = generateOptparseApplicativeCompletion "hercules-ci-agent" super.hercules-ci-agent; hercules-ci-cli = generateOptparseApplicativeCompletion "hci" ( # See hercules-ci-optparse-applicative in non-hackage-packages.nix. @@ -1659,7 +1598,7 @@ self: super: { feed = dontCheck super.feed; spacecookie = overrideCabal super.spacecookie (old: { - buildTools = (old.buildTools or []) ++ [ pkgs.installShellFiles ]; + buildTools = (old.buildTools or []) ++ [ pkgs.buildPackages.installShellFiles ]; # let testsuite discover the resulting binary preCheck = '' export SPACECOOKIE_TEST_BIN=./dist/build/spacecookie/spacecookie @@ -1821,10 +1760,6 @@ self: super: { passthru.updateScript = ../../../maintainers/scripts/haskell/update-cabal2nix-unstable.sh; }; - # Too strict version bounds on base and optparse-applicative - # https://github.com/diagrams/diagrams-cairo/issues/77 - diagrams-cairo = doJailbreak super.diagrams-cairo; - # Too strict version bounds on base # https://github.com/gibiansky/IHaskell/issues/1217 ihaskell-display = doJailbreak super.ihaskell-display; @@ -1935,7 +1870,7 @@ EOT ] ++ (drv.patches or []); # fix line endings preventing patch from applying prePatch = '' - ${pkgs.dos2unix}/bin/dos2unix hashable.cabal + ${pkgs.buildPackages.dos2unix}/bin/dos2unix hashable.cabal '' + (drv.prePatch or ""); }); @@ -1943,16 +1878,10 @@ EOT # https://github.com/haskell-hvr/missingh/issues/56 MissingH = doJailbreak super.MissingH; - # Too strict bound on random - # https://github.com/batterseapower/parallel-io/issues/14 - parallel-io = doJailbreak super.parallel-io; - # Disable flaky tests # https://github.com/DavidEichmann/alpaca-netcode/issues/2 alpaca-netcode = overrideCabal super.alpaca-netcode { - # use testTarget to also pass some flags to the test suite. - # TODO: We should add proper support for this to the builder. - testTarget = "test --test-options='-p \"!/[NOCI]/\"'"; + testFlags = [ "--pattern" "!/[NOCI]/" ]; }; # Tests require to run a binary which isn't built @@ -1963,34 +1892,48 @@ EOT # this, run tests with only a single job. # https://github.com/vmchale/libarchive/issues/20 libarchive = overrideCabal super.libarchive { - # TODO: We should add proper support for this to the builder. - testTarget = "libarchive-test --test-options='-j1'"; + testFlags = [ "-j1" ]; }; - # 2021-05-23: Override for a quite recent Hackage release. - taffybar = - if pkgs.lib.versionAtLeast super.taffybar.version "3.2.5" - then throw "Drop src override for taffybar >= 3.2.5" - else overrideCabal super.taffybar (drv: { - src = pkgs.fetchFromGitHub { - owner = "taffybar"; - repo = "taffybar"; - rev = "91c83e01e131d560e704b12f0d798905e4289a3d"; - sha256 = "1kkpkjdyd1yv8z1qlzr3jrzyk9lxac5m4f9py8igyars2nwnhhzr"; - }; - version = "3.2.5"; - editedCabalFile = null; - }); + # unrestrict bounds for hashable and semigroups + # https://github.com/HeinrichApfelmus/reactive-banana/issues/215 + reactive-banana = doJailbreak super.reactive-banana; - # 2021-05-25: Fixes darwin build: https://gitlab.com/lysxia/ap-normalize/-/issues/1 - ap-normalize = - assert pkgs.lib.versionOlder super.ap-normalize.version "0.1.0.1"; - overrideSrc super.ap-normalize rec { - version = "0.1.0.1"; - src = pkgs.fetchurl { - url = "https://hackage.haskell.org/package/ap-normalize-${version}/ap-normalize-${version}.tar.gz"; - sha256 = "1212zxc4qn6msk0w13yhrza2qjs79h78misllb4chng75jqi61l2"; - }; - }; + hackage-db_2_1_0 = doDistribute super.hackage-db_2_1_0; + + # Too strict bounds on QuickCheck + # https://github.com/muesli4/table-layout/issues/16 + table-layout = doJailbreak super.table-layout; + + # Bounds on profunctors are too strict + # https://github.com/ConferOpenSource/composite/issues/50 + # Remove overrides when assert fails. + composite-base = assert super.composite-base.version == "0.7.5.0"; + doJailbreak super.composite-base; + composite-aeson = assert super.composite-aeson.version == "0.7.5.0"; + doJailbreak super.composite-aeson; + + # Too strict bounds on profunctors + # https://github.com/google/proto-lens/issues/413 + proto-lens = doJailbreak super.proto-lens; + + # Too strict bounds on profunctors + # https://github.com/jcranch/tophat/issues/1 + tophat = doJailbreak super.tophat; + + # 2021-06-20: Outdated upper bounds + # https://github.com/Porges/email-validate-hs/issues/58 + email-validate = doJailbreak super.email-validate; + + # 2021-06-20: Outdated upper bounds + # https://github.com/Porges/email-validate-hs/issues/58 + ghcup = doJailbreak super.ghcup; + + # Break out of "Cabal < 3.2" constraint. + stylish-haskell = doJailbreak super.stylish-haskell; + + # To strict bound on hspec + # https://github.com/dagit/zenc/issues/5 + zenc = doJailbreak super.zenc; } // import ./configuration-tensorflow.nix {inherit pkgs haskellLib;} self super diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-darwin.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-darwin.nix index 7e02a6653c..0c4b46360b 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-darwin.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-darwin.nix @@ -170,5 +170,11 @@ self: super: { # 2021-05-25: Tests fail and I have no way to debug them. hls-class-plugin = dontCheck super.hls-class-plugin; + hls-brittany-plugin = dontCheck super.hls-brittany-plugin; + hls-fourmolu-plugin = dontCheck super.hls-fourmolu-plugin; + hls-module-name-plugin = dontCheck super.hls-module-name-plugin; + + # We are lacking pure pgrep at the moment for tests to work + tmp-postgres = dontCheck super.tmp-postgres; } diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.10.x.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.10.x.nix index 9866364e34..251a3d94bb 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.10.x.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.10.x.nix @@ -5,7 +5,7 @@ with haskellLib; self: super: { # This compiler version needs llvm 9.x. - llvmPackages = pkgs.llvmPackages_9; + llvmPackages = pkgs.lib.dontRecurseIntoAttrs pkgs.llvmPackages_9; # Disable GHC 8.10.x core libraries. array = null; @@ -84,7 +84,8 @@ self: super: { executableHaskellDepends = drv.executableToolDepends or [] ++ [ self.repline ]; })); - # Break out of "Cabal < 3.2" constraint. - stylish-haskell = doJailbreak super.stylish-haskell; + # hackage-db 2.1.1 is incompatible with Cabal < 3.4 + # See https://github.com/NixOS/cabal2nix/issues/501 + hackage-db = self.hackage-db_2_1_0; } diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.6.x.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.6.x.nix index bcce0bb897..42fa603d33 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.6.x.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.6.x.nix @@ -5,7 +5,7 @@ with haskellLib; self: super: { # This compiler version needs llvm 6.x. - llvmPackages = pkgs.llvmPackages_6; + llvmPackages = pkgs.lib.dontRecurseIntoAttrs pkgs.llvmPackages_6; # Disable GHC 8.6.x core libraries. array = null; @@ -106,4 +106,8 @@ self: super: { # https://github.com/haskellari/time-compat/issues/23 time-compat = dontCheck super.time-compat; + # hackage-db 2.1.1 is incompatible with Cabal < 3.4 + # See https://github.com/NixOS/cabal2nix/issues/501 + hackage-db = super.hackage-db_2_1_0; + } diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.8.x.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.8.x.nix index 8fb10d8b05..7908066ebb 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.8.x.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-8.8.x.nix @@ -5,7 +5,7 @@ with haskellLib; self: super: { # This compiler version needs llvm 7.x. - llvmPackages = pkgs.llvmPackages_7; + llvmPackages = pkgs.lib.dontRecurseIntoAttrs pkgs.llvmPackages_7; # Disable GHC 8.8.x core libraries. array = null; @@ -135,4 +135,8 @@ self: super: { # vector 0.12.2 indroduced doctest checks that don‘t work on older compilers vector = dontCheck super.vector; + + # hackage-db 2.1.1 is incompatible with Cabal < 3.4 + # See https://github.com/NixOS/cabal2nix/issues/501 + hackage-db = super.hackage-db_2_1_0; } diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-9.0.x.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-9.0.x.nix index ff82fc8c19..7731c73f0f 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-9.0.x.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-9.0.x.nix @@ -5,7 +5,7 @@ with haskellLib; self: super: { # This compiler version needs llvm 10.x. - llvmPackages = pkgs.llvmPackages_10; + llvmPackages = pkgs.lib.dontRecurseIntoAttrs pkgs.llvmPackages_10; # Disable GHC 9.0.x core libraries. array = null; @@ -80,10 +80,6 @@ self: super: { sha256 = "1rzs764a0nhx002v4fadbys98s6qblw4kx4g46galzjf5f7n2dn4"; }); doctest = dontCheck (doJailbreak super.doctest_0_18_1); - generic-deriving = appendPatch (doJailbreak super.generic-deriving) (pkgs.fetchpatch { - url = "https://gitlab.haskell.org/ghc/head.hackage/-/raw/master/patches/generic-deriving-1.13.1.patch"; - sha256 = "0z85kiwhi5p2wiqwyym0y8q8qrcifp125x5vm0n4482lz41kmqds"; - }); language-haskell-extract = appendPatch (doJailbreak super.language-haskell-extract) (pkgs.fetchpatch { url = "https://gitlab.haskell.org/ghc/head.hackage/-/raw/master/patches/language-haskell-extract-0.2.4.patch"; sha256 = "0rgzrq0513nlc1vw7nw4km4bcwn4ivxcgi33jly4a7n3c1r32v1f"; @@ -95,10 +91,25 @@ self: super: { # The test suite seems pretty broken. base64-bytestring = dontCheck super.base64-bytestring; - # 5.6 introduced support for GHC 9.0.x, but hasn't landed in stackage yet - profunctors = super.profunctors_5_6_2; - # 5 introduced support for GHC 9.0.x, but hasn't landed in stackage yet lens = super.lens_5_0_1; + # 0.16.0 introduced support for GHC 9.0.x, stackage has 0.15.0 + memory = super.memory_0_16_0; + + # GHC 9.0.x doesn't like `import Spec (main)` in Main.hs + # https://github.com/snoyberg/mono-traversable/issues/192 + mono-traversable = dontCheck super.mono-traversable; + + # Disable tests pending resolution of + # https://github.com/Soostone/retry/issues/71 + retry = dontCheck super.retry; + + # hlint 3.3 needs a ghc-lib-parser newer than the one from stackage + hlint = super.hlint_3_3_0.overrideScope (self: super: { + ghc-lib-parser = overrideCabal self.ghc-lib-parser_9_0_1_20210324 { + doHaddock = false; + }; + ghc-lib-parser-ex = self.ghc-lib-parser-ex_9_0_0_4; + }); } diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-head.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-head.nix index 2b136c6bf8..ca455a7c89 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-head.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-ghc-head.nix @@ -11,7 +11,7 @@ with haskellLib; self: super: { - llvmPackages = pkgs.llvmPackages_10; + llvmPackages = pkgs.lib.dontRecurseIntoAttrs pkgs.llvmPackages_10; # Disable GHC 8.7.x core libraries. array = null; diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/broken.yaml b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/broken.yaml index da10af5b53..d960d4ed8f 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/broken.yaml +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/broken.yaml @@ -60,6 +60,7 @@ broken-packages: - adaptive-containers - adaptive-tuple - adb + - addy - adjunction - adobe-swatch-exchange - ADPfusion @@ -118,6 +119,7 @@ broken-packages: - alto - alure - amazon-emailer + - amazonka-s3-streaming - amazon-products - amby - AMI @@ -195,6 +197,7 @@ broken-packages: - ascii-flatten - ascii-string - ascii-vector-avc + - asif - asil - asn - asn1-codec @@ -370,6 +373,7 @@ broken-packages: - biohazard - bio-sequence - birds-of-paradise + - biscuit-haskell - bisect-binary - bishbosh - bitcoin-hs @@ -400,6 +404,7 @@ broken-packages: - bloomfilter-redis - blosum - blubber-server + - bludigon - Blueprint - bluetileutils - blunk-hask-tests @@ -538,6 +543,7 @@ broken-packages: - canteven-parsedate - cantor - Capabilities + - capataz - capnp - capped-list - capri @@ -649,6 +655,7 @@ broken-packages: - clipper - clisparkline - clit + - clock-extras - clogparse - clone-all - closure @@ -676,6 +683,7 @@ broken-packages: - codec-beam - codec-libevent - codecov-haskell + - codeforces-cli - codepad - codeworld-api - codex @@ -703,6 +711,7 @@ broken-packages: - commander - Commando - commodities + - commonmark-cli - commsec - compactable - Compactable @@ -799,6 +808,7 @@ broken-packages: - CoreDump - CoreErlang - core-haskell + - corenlp-parser - Coroutine - coroutine-object - CouchDB @@ -832,6 +842,7 @@ broken-packages: - criu-rpc-types - crjdt-haskell - crocodile + - cronus - cruncher-types - crunghc - crypto-cipher-benchmarks @@ -852,6 +863,7 @@ broken-packages: - css - css-easings - css-selectors + - css-syntax - csv-nptools - ctemplate - ctkl @@ -997,15 +1009,16 @@ broken-packages: - dhall-fly - dhall-text - dhall-to-cabal + - dhcp-lease-parser - dhrun - dia-base - diagrams-boolean + - diagrams-builder - diagrams-canvas - diagrams-graphviz - diagrams-gtk - diagrams-pdf - diagrams-qrcode - - diagrams-rasterific - diagrams-tikz - dib - dice2tex @@ -1039,6 +1052,7 @@ broken-packages: - direct-plugins - direct-rocksdb - direm + - discord-haskell - discordian-calendar - discord-types - discrete @@ -1074,6 +1088,7 @@ broken-packages: - docusign-example - docvim - domplate + - do-spaces - dotfs - dot-linker - doublify-toolkit @@ -1213,7 +1228,6 @@ broken-packages: - erlang - erlang-ffi - eros - - errata - error-context - error-continuations - error-list @@ -1282,6 +1296,7 @@ broken-packages: - Facebook-Password-Hacker-Online-Latest-Version - faceted - facts + - fadno-braids - failable-list - failure-detector - fakedata @@ -1482,6 +1497,7 @@ broken-packages: - funpat - funspection - fused-effects-exceptions + - fused-effects-mwc-random - fused-effects-resumable - fusion - futun @@ -1554,6 +1570,7 @@ broken-packages: - ghc-clippy-plugin - ghc-core-smallstep - ghc-datasize + - ghc-debug-convention - ghc-dump-tree - ghc-dup - ghc-events-analyze @@ -1635,6 +1652,7 @@ broken-packages: - global-variables - glob-posix - GlomeTrace + - gloss-banana - gloss-export - gloss-game - glpk-headers @@ -1758,7 +1776,18 @@ broken-packages: - hakismet - hakka - hako + - hakyll-blaze-templates + - hakyll-contrib + - hakyll-contrib-csv + - hakyll-contrib-elm + - hakyll-contrib-links + - hakyll-dhall + - hakyll-dir-list + - hakyll-process + - hakyll-R + - hakyll-series - hakyll-shortcode + - hakyll-shortcut-links - HaLeX - halfs - halipeto @@ -1832,7 +1861,6 @@ broken-packages: - haskell-awk - haskell-bitmex-rest - haskell-brainfuck - - haskell-ci - haskell-cnc - haskell-coffee - haskell-compression @@ -1886,6 +1914,7 @@ broken-packages: - haskey - haskheap - haskhol-core + - hasklepias - haskmon - haskoin - haskoin-util @@ -1897,6 +1926,7 @@ broken-packages: - haskus-binary - haskyapi - hasmin + - hasqlator-mysql - hasql-backend - hasql-class - hasql-cursor-transaction @@ -2025,6 +2055,7 @@ broken-packages: - hgrib - hharp - HHDL + - hhp - hhwloc - hi - hi3status @@ -2081,10 +2112,8 @@ broken-packages: - hlogger - HLogger - hlongurl + - hlrdb-core - hls-exactprint-utils - - hls-floskell-plugin - - hls-fourmolu-plugin - - hls-pragmas-plugin - hlwm - hmarkup - hmatrix-banded @@ -2092,6 +2121,7 @@ broken-packages: - hmatrix-nipals - hmatrix-sparse - hmatrix-static + - hmatrix-sundials - hmatrix-svdlibc - hmatrix-syntax - hmatrix-tests @@ -2184,6 +2214,7 @@ broken-packages: - hs-carbon-examples - hscd - hs-cdb + - hscdio - hsclock - hScraper - hscuid @@ -2341,9 +2372,11 @@ broken-packages: - hVOIDP - hwall-auth-iitk - hw-ci-assist + - hw-dump - hweblib - hwhile - hw-json-simd + - hw-mquery - hworker - hw-simd - hwsl2 @@ -2462,6 +2495,7 @@ broken-packages: - Irc - irc-dcc - irc-fun-types + - iri - iridium - iron-mq - irt @@ -2530,6 +2564,7 @@ broken-packages: - json-schema - jsonschema-gen - jsonsql + - json-syntax - json-tools - json-tracer - jsontsv @@ -2557,6 +2592,7 @@ broken-packages: - katip-syslog - katt - katydid + - kawaii - kawhi - kdesrc-build-extra - kd-tree @@ -2585,6 +2621,7 @@ broken-packages: - ktx - ktx-codec - kuifje + - kure - kure-your-boilerplate - KyotoCabinet - labeled-graph @@ -2709,6 +2746,7 @@ broken-packages: - limp-cbc - linda - linden + - linear-accelerate - linear-algebra-cblas - linear-base - linear-code @@ -2741,6 +2779,7 @@ broken-packages: - list-remote-forwards - ListT - list-t-http-client + - list-tries - list-t-text - list-zip-def - list-zipper @@ -2857,6 +2896,7 @@ broken-packages: - MASMGen - massiv-persist - massiv-serialise + - master-plan - mathflow - math-grads - math-interpolate @@ -2962,6 +3002,7 @@ broken-packages: - mmtf - mmtl - Mobile-Legends-Hack-Cheats + - mock-time - modelicaparser - modular-prelude - module-management @@ -3039,6 +3080,7 @@ broken-packages: - movie-monad - mpppc - mpris + - mptcp-pm - mpvguihs - mqtt - mqtt-hs @@ -3192,6 +3234,7 @@ broken-packages: - nix-freeze-tree - nixfromnpm - nixpkgs-update + - nix-thunk - nix-tools - nkjp - nlp-scores @@ -3279,6 +3322,7 @@ broken-packages: - open-adt - OpenAFP - openai-hs + - openai-servant - openapi3-code-generator - openapi-petstore - openapi-typed @@ -3370,6 +3414,7 @@ broken-packages: - pandoc-utils - pang-a-lambda - pangraph + - pan-os-syslog - panpipe - pansite - pantry-tmp @@ -3407,6 +3452,8 @@ broken-packages: - parser-helper - parsers-megaparsec - parsimony + - parsley + - parsley-core - parsnip - partage - partial-records @@ -3467,6 +3514,7 @@ broken-packages: - persistent-cereal - persistent-database-url - persistent-discover + - persistent-documentation - persistent-equivalence - persistent-migration - persistent-mongoDB @@ -3489,6 +3537,7 @@ broken-packages: - pg-recorder - pg-store - pgstream + - pg-transact - phasechange - phaser - phoityne @@ -3576,6 +3625,7 @@ broken-packages: - poly-control - polydata-core - polynomial + - polysemy - polysemy-zoo - polytypeable - pomohoro @@ -3594,6 +3644,7 @@ broken-packages: - posix-api - posix-realtime - posix-waitpid + - posplyu - postcodes - postgres-embedded - postgresql-lo-stream @@ -3612,6 +3663,7 @@ broken-packages: - postmaster - potato-tool - potoki-core + - powerdns - powermate - powerpc - powerqueue-levelmem @@ -3701,7 +3753,6 @@ broken-packages: - proxy-mapping - pseudo-trie - PTQ - - ptr-poker - publicsuffixlistcreate - publish - pubnub @@ -3719,6 +3770,7 @@ broken-packages: - pushme - push-notifications - putlenses + - puzzle-draw - pyffi - pyfi - python-pickle @@ -3763,6 +3815,7 @@ broken-packages: - quiver - quokka - quoridor-hs + - raaz - RabbitMQ - rad - radian @@ -3800,7 +3853,9 @@ broken-packages: - react-haskell - reaction-logic - reactive-bacon - - reactive-banana + - reactive-banana-gi-gtk + - reactive-banana-sdl2 + - reactive-banana-threepenny - reactive-thread - react-tutorial-haskell-server - readability @@ -4083,6 +4138,7 @@ broken-packages: - serokell-util - servant-aeson-specs - servant-auth-cookie + - servant-auth-docs - servant-auth-hmac - servant-auth-token-api - servant-avro @@ -4176,9 +4232,11 @@ broken-packages: - shivers-cfg - shoap - shopify + - shortcut-links - shorten-strings - show-prettyprint - Shpadoinkle-backend-snabbdom + - Shpadoinkle-isreal - Shpadoinkle-streaming - shwifty - sifflet @@ -4252,6 +4310,7 @@ broken-packages: - slug - slugify - smallarray + - small-bytearray-builder - smallcheck-kind-generics - smallcheck-laws - smallcheck-lens @@ -4335,8 +4394,10 @@ broken-packages: - sparse - sparsecheck - sparse-lin-alg + - spartacon - special-functors - special-keys + - speculate - speculation - sphinx - sphinxesc @@ -4458,6 +4519,7 @@ broken-packages: - string-quote - stringtable-atom - stripe + - stripeapi - stripe-hs - stripe-http-streams - stripe-signature @@ -4506,6 +4568,7 @@ broken-packages: - swift-lda - swiss-ephemeris - swisstable + - sws - syb-extras - SybWidget - syb-with-class-instances-text @@ -4538,7 +4601,6 @@ broken-packages: - t3-server - table - tableaux - - table-layout - tables - Tables - tablestorage @@ -4576,11 +4638,13 @@ broken-packages: - tcod-haskell - tcp - tcp-streams-openssl + - tdigest-Chart - tds - teams - teeth - telegram - telegram-api + - telegram-bot-simple - teleport - teleshell - tellbot @@ -4605,6 +4669,7 @@ broken-packages: - terntup - terraform-http-backend-pass - tersmu + - tesla - testCom - testcontainers - test-fixture @@ -4640,6 +4705,7 @@ broken-packages: - text-position - text-register-machine - text-replace + - text-time - textual - text-utf8 - text-xml-qq @@ -4650,6 +4716,7 @@ broken-packages: - thank-you-stars - th-build - th-dict-discovery + - themoviedb - thentos-cookie-session - Theora - theoremquest @@ -4715,7 +4782,6 @@ broken-packages: - Titim - tkhs - tkyprof - - tmp-postgres - todo - tofromxml - to-haskell @@ -4820,6 +4886,7 @@ broken-packages: - typed-encoding - typedflow - typedquery + - typed-time - typed-wire - type-eq - type-fun @@ -4887,9 +4954,11 @@ broken-packages: - unordered-intmap - unpacked-either - unpacked-maybe + - unpacked-maybe-numeric - unpack-funcs - unroll-ghc-plugin - unsafely + - unsatisfiable - unsequential - unused - uom-plugin @@ -5056,6 +5125,7 @@ broken-packages: - weather-api - webapp - WebBits + - webby - webcloud - webcrank - webcrank-dispatch @@ -5086,7 +5156,6 @@ broken-packages: - whiskers - whois - why3 - - wide-word - WikimediaParser - windns - winerror @@ -5165,7 +5234,6 @@ broken-packages: - xmonad-dbus - xmonad-eval - xmonad-vanessa - - xmonad-wallpaper - xmonad-windownames - xor - Xorshift128Plus @@ -5185,6 +5253,7 @@ broken-packages: - yahoo-web-search - yajl - yall + - yam-app - yam-config - yaml-pretty-extras - YamlReference @@ -5233,6 +5302,7 @@ broken-packages: - yesod-form-richtext - yesod-gitrev - yesod-goodies + - yesod-ip - yesod-job-queue - yesod-links - yesod-lucid @@ -5300,3 +5370,4 @@ broken-packages: - ztar - Zwaluw - zxcvbn-dvorak + - zxcvbn-hs diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/main.yaml b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/main.yaml index 86edacf144..fa4e798d1d 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/main.yaml +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/main.yaml @@ -73,23 +73,21 @@ default-package-overrides: # gi-gdkx11-4.x requires gtk-4.x, which is still under development and # not yet available in Nixpkgs - gi-gdkx11 < 4 - # Needs Cabal 3.4 for Setup.hs - - gi-javascriptcore < 4.0.23 # - - gi-soup < 2.4.24 # - - gi-webkit2 < 4.0.27 # # 2021-05-11: not all diagrams libraries have adjusted to # monoid-extras 0.6 yet, keep them pinned to lower versions # until we can do a full migration, see # https://github.com/diagrams/diagrams-core/issues/115 # We can keep this pin at most until base 4.15 + # Since the monoid-extras adjustment was combined with + # a major release in some cases, we need to wait for + # diagrams 1.5 to be released. - monoid-extras < 0.6 + - dual-tree < 0.2.3.0 - diagrams-core < 1.5.0 - # 2021-05-11: Pin for hls 1.1.0 - - ghcide == 1.2.* - - hls-plugin-api == 1.1.0.0 - - hls-explicit-imports-plugin < 1.0.0.2 - # 2021-05-12: remove once versions >= 5.0.0 is in stackage - - futhark < 0.19.5 + - diagrams-lib < 1.4.4 + # 2021-06-14: hnix still needs old versions https://github.com/haskell-nix/hnix/issues/952 + - hnix-store-core < 0.5 + - hnix-store-remote < 0.5 extra-packages: - base16-bytestring < 1 # required for cabal-install etc. @@ -99,6 +97,7 @@ extra-packages: - dependent-map == 0.2.4.0 # required by Hasura 1.3.1, 2020-08-20 - dependent-sum == 0.4 # required by Hasura 1.3.1, 2020-08-20 - dhall == 1.29.0 # required for ats-pkg + - dhall == 1.38.1 # required for spago - Diff < 0.4 # required by liquidhaskell-0.8.10.2: https://github.com/ucsd-progsys/liquidhaskell/issues/1729 - ghc-tcplugins-extra ==0.3.2 # required for polysemy-plugin 0.2.5.0 - haddock == 2.23.* # required on GHC < 8.10.x @@ -106,7 +105,6 @@ extra-packages: - haddock-library ==1.7.* # required by stylish-cabal-0.5.0.0 - happy == 1.19.9 # for purescript - hinotify == 0.3.9 # for xmonad-0.26: https://github.com/kolmodin/hinotify/issues/29 - - hlint < 3.3 # We don‘t have ghc-lib-parser 9.0.X yet. - immortal == 0.2.2.1 # required by Hasura 1.3.1, 2020-08-20 - mmorph == 1.1.3 # Newest working version of mmorph on ghc 8.6.5. needed for hls - network == 2.6.3.1 # required by pkgs/games/hedgewars/default.nix, 2020-11-15 @@ -115,10 +113,8 @@ extra-packages: - resolv == 0.1.1.2 # required to build cabal-install-3.0.0.0 with pre ghc-8.8.x - sbv == 7.13 # required for pkgs.petrinizer - crackNum < 3.0 # 2021-05-21: 3.0 removed the lib which sbv 7.13 uses - - gi-gdk == 3.0.24 # 2021-05-07: For haskell-gi 0.25 without gtk4 - - gi-gtk < 4.0 # 2021-05-07: For haskell-gi 0.25 without gtk4 - - gi-gdkx11 == 3.0.11 # 2021-05-07: For haskell-gi 0.25 without gtk4 - ShellCheck == 0.7.1 # 2021-05-09: haskell-ci 0.12.1 pins this version + - hackage-db < 2.1.1 # 2021-06-10: Need older hackage-db as long as Cabal < 3.4, see https://github.com/NixOS/cabal2nix/issues/501 package-maintainers: abbradar: @@ -126,6 +122,7 @@ package-maintainers: berberman: - nvfetcher - arch-web + - uusi bdesham: - pinboard-notes-backup cdepillabout: @@ -134,6 +131,9 @@ package-maintainers: - pretty-simple - spago - termonad + domenkozar: + - cachix + - cachix-api expipiplus1: - VulkanMemoryAllocator - autoapply @@ -302,6 +302,13 @@ package-maintainers: - yarn-lock - yarn2nix - large-hashable + - haskell-ci + - diagrams + - rel8 + # owothia + - irc-client + - chatter + - envy terlar: - nix-diff turion: @@ -383,6 +390,7 @@ unsupported-platforms: mpi-hs-cereal: [ aarch64-linux, x86_64-darwin ] mpi-hs-store: [ aarch64-linux, x86_64-darwin ] mplayer-spot: [ aarch64-linux ] + mptcp-pm: [ x86_64-darwin ] netlink: [ x86_64-darwin ] oculus: [ x86_64-darwin ] pam: [ x86_64-darwin ] @@ -395,6 +403,7 @@ unsupported-platforms: PortMidi: [ x86_64-darwin ] posix-api: [ x86_64-darwin ] Raincat: [ x86_64-darwin ] + reactive-balsa: [ x86_64-darwin ] # depends on alsa-core reactivity: [ i686-linux, x86_64-linux, x86_64-darwin, aarch64-linux, armv7l-linux ] reflex-dom-fragment-shader-canvas: [ x86_64-darwin, aarch64-linux ] reflex-dom: [ x86_64-darwin, aarch64-linux ] diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/stackage.yaml b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/stackage.yaml index a8c353cd6a..69f518322c 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/stackage.yaml +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/stackage.yaml @@ -1,4 +1,4 @@ -# Stackage Nightly 2021-05-19 +# Stackage LTS 18.0 # This file is auto-generated by # maintainers/scripts/haskell/update-stackage.sh default-package-overrides: @@ -11,6 +11,8 @@ default-package-overrides: - ad ==4.4.1 - adjunctions ==4.4 - adler32 ==0.1.2.0 + - aern2-mp ==0.2.7.0 + - aern2-real ==0.2.7.0 - aeson ==1.5.6.0 - aeson-attoparsec ==0.0.0 - aeson-better-errors ==0.9.1.0 @@ -26,13 +28,13 @@ default-package-overrides: - aeson-picker ==0.1.0.5 - aeson-pretty ==0.8.8 - aeson-qq ==0.8.3 - - aeson-schemas ==1.3.3 - - aeson-typescript ==0.3.0.0 + - aeson-schemas ==1.3.4 + - aeson-typescript ==0.3.0.1 - aeson-with ==0.1.2.0 - aeson-yak ==0.1.1.3 - aeson-yaml ==1.1.0.0 - Agda ==2.6.1.3 - - agda2lagda ==0.2020.11.1 + - agda2lagda ==0.2021.6.1 - al ==0.1.4.2 - alarmclock ==0.7.0.5 - alerts ==0.1.2.0 @@ -148,16 +150,16 @@ default-package-overrides: - apecs-physics ==0.4.5 - api-field-json-th ==0.1.0.2 - api-maker ==0.1.0.0 - - ap-normalize ==0.1.0.0 + - ap-normalize ==0.1.0.1 - appar ==0.1.8 - appendmap ==0.1.5 - - apply-refact ==0.9.2.0 + - apply-refact ==0.9.3.0 - apportionment ==0.0.0.3 - approximate ==0.3.4 - approximate-equality ==1.1.0.2 - app-settings ==0.2.0.12 - arbor-lru-cache ==0.1.1.1 - - arithmoi ==0.11.0.1 + - arithmoi ==0.12.0.0 - array-memoize ==0.6.0 - arrow-extras ==0.1.0.1 - arrows ==0.4.4.2 @@ -176,7 +178,7 @@ default-package-overrides: - asn1-types ==0.3.4 - assert-failure ==0.1.2.5 - assoc ==1.0.2 - - astro ==0.4.2.1 + - astro ==0.4.3.0 - async ==2.2.3 - async-extra ==0.2.0.0 - async-pool ==0.9.1 @@ -193,14 +195,15 @@ default-package-overrides: - attoparsec-path ==0.0.0.1 - audacity ==0.0.2 - aur ==7.0.6 - - aura ==3.2.4 + - aura ==3.2.5 - authenticate ==1.3.5 - authenticate-oauth ==1.6.0.1 - autoexporter ==1.1.20 - auto-update ==0.1.6 - - avers ==0.0.17.1 - avro ==0.5.2.0 - - aws-cloudfront-signed-cookies ==0.2.0.6 + - aws-cloudfront-signed-cookies ==0.2.0.8 + - aws-xray-client ==0.1.0.0 + - aws-xray-client-wai ==0.1.0.0 - backprop ==0.2.6.4 - backtracking ==0.1.0 - bank-holidays-england ==0.2.0.6 @@ -233,7 +236,7 @@ default-package-overrides: - bech32 ==1.1.0 - bech32-th ==1.0.2 - bench ==1.0.12 - - benchpress ==0.2.2.16 + - benchpress ==0.2.2.17 - between ==0.11.0.0 - bibtex ==0.1.0.6 - bifunctors ==5.5.11 @@ -275,7 +278,7 @@ default-package-overrides: - blaze-svg ==0.3.6.1 - blaze-textual ==0.2.1.0 - bmp ==1.2.6.3 - - BNFC ==2.9.1 + - BNFC ==2.9.2 - BNFC-meta ==0.6.1 - board-games ==0.3 - boltzmann-samplers ==0.1.1.0 @@ -300,7 +303,7 @@ default-package-overrides: - buffer-builder ==0.2.4.7 - buffer-pipe ==0.0 - bugsnag-haskell ==0.0.4.1 - - bugsnag-hs ==0.2.0.3 + - bugsnag-hs ==0.2.0.4 - bugzilla-redhat ==0.3.1 - burrito ==1.2.0.2 - butcher ==1.3.3.2 @@ -325,14 +328,15 @@ default-package-overrides: - bzlib ==0.5.1.0 - bzlib-conduit ==0.3.0.2 - c14n ==0.1.0.1 - - c2hs ==0.28.7 + - c2hs ==0.28.8 + - cabal2spec ==2.6.2 - cabal-appimage ==0.3.0.2 - cabal-debian ==5.1 - cabal-doctest ==1.0.8 - cabal-file ==0.1.1 - cabal-flatpak ==0.1.0.2 - cabal-plan ==0.7.2.0 - - cabal-rpm ==2.0.8 + - cabal-rpm ==2.0.9 - cache ==0.1.3.0 - cacophony ==0.10.1 - calendar-recycling ==0.0.0.1 @@ -356,7 +360,7 @@ default-package-overrides: - cayley-client ==0.4.15 - cborg ==0.2.5.0 - cborg-json ==0.2.2.0 - - cdar-mBound ==0.1.0.1 + - cdar-mBound ==0.1.0.4 - c-enum ==0.1.0.1 - cereal ==0.5.8.1 - cereal-conduit ==0.8.0 @@ -389,19 +393,18 @@ default-package-overrides: - cipher-des ==0.0.6 - cipher-rc4 ==0.1.4 - circle-packing ==0.1.0.6 - - circular ==0.3.1.1 - - citeproc ==0.3.0.9 - - clash-ghc ==1.4.1 - - clash-lib ==1.4.1 - - clash-prelude ==1.4.1 + - circular ==0.4.0.0 + - citeproc ==0.4.0.1 + - clash-ghc ==1.4.2 + - clash-lib ==1.4.2 + - clash-prelude ==1.4.2 - classy-prelude ==1.5.0 - classy-prelude-conduit ==1.5.0 - clay ==0.13.3 - clientsession ==0.9.1.2 - climb ==0.3.3 - Clipboard ==2.3.2.0 - - clock ==0.8 - - clock-extras ==0.1.0.2 + - clock ==0.8.2 - closed ==0.2.0.1 - clumpiness ==0.17.0.2 - ClustalParser ==1.3.0 @@ -414,16 +417,16 @@ default-package-overrides: - collect-errors ==0.1.5.0 - co-log-concurrent ==0.5.0.0 - co-log-core ==0.2.1.1 - - Color ==0.3.1 + - Color ==0.3.2 - colorful-monoids ==0.2.1.3 - colorize-haskell ==1.0.1 - colour ==2.3.5 - combinatorial ==0.1.0.1 - comfort-array ==0.4.1 - comfort-graph ==0.0.3.1 - - commonmark ==0.1.1.4 - - commonmark-extensions ==0.2.0.4 - - commonmark-pandoc ==0.2.0.1 + - commonmark ==0.2 + - commonmark-extensions ==0.2.1.2 + - commonmark-pandoc ==0.2.1 - commutative ==0.0.2 - comonad ==5.0.8 - comonad-extras ==4.0.1 @@ -433,16 +436,6 @@ default-package-overrides: - compiler-warnings ==0.1.0 - composable-associations ==0.1.0.0 - composable-associations-aeson ==0.1.0.1 - - composite-aeson ==0.7.5.0 - - composite-aeson-path ==0.7.5.0 - - composite-aeson-refined ==0.7.5.0 - - composite-aeson-throw ==0.1.0.0 - - composite-base ==0.7.5.0 - - composite-binary ==0.7.5.0 - - composite-ekg ==0.7.5.0 - - composite-hashable ==0.7.5.0 - - composite-tuple ==0.1.2.0 - - composite-xstep ==0.1.0.0 - composition ==1.0.2.2 - composition-extra ==2.0.0 - concise ==0.1.0.1 @@ -508,7 +501,7 @@ default-package-overrides: - cryptohash-sha1 ==0.11.100.1 - cryptohash-sha256 ==0.11.102.0 - cryptohash-sha512 ==0.11.100.1 - - cryptonite ==0.28 + - cryptonite ==0.29 - cryptonite-conduit ==0.2.2 - cryptonite-openssl ==0.7 - crypto-numbers ==0.2.7 @@ -519,6 +512,7 @@ default-package-overrides: - csp ==1.4.0 - css-syntax ==0.1.0.0 - css-text ==0.1.3.0 + - c-struct ==0.1.0.1 - csv ==0.1.2 - ctrie ==0.2 - cubicbezier ==0.6.0.6 @@ -573,6 +567,7 @@ default-package-overrides: - data-textual ==0.3.0.3 - dataurl ==0.1.0.0 - DAV ==1.3.4 + - DBFunctor ==0.1.2.1 - dbus ==1.2.17 - dbus-hslogger ==0.1.0.1 - debian ==4.0.2 @@ -593,14 +588,14 @@ default-package-overrides: - deque ==0.4.3 - deriveJsonNoPrefix ==0.1.0.1 - derive-topdown ==0.0.2.2 - - deriving-aeson ==0.2.6.1 + - deriving-aeson ==0.2.7 - deriving-compat ==0.5.10 - derulo ==1.0.10 - - dhall ==1.38.1 - - dhall-bash ==1.0.36 - - dhall-json ==1.7.6 - - dhall-lsp-server ==1.0.14 - - dhall-yaml ==1.2.6 + - dhall ==1.39.0 + - dhall-bash ==1.0.37 + - dhall-json ==1.7.7 + - dhall-lsp-server ==1.0.15 + - dhall-yaml ==1.2.7 - diagrams-solve ==0.1.3 - dialogflow-fulfillment ==0.1.1.4 - di-core ==1.0.4 @@ -619,16 +614,16 @@ default-package-overrides: - distribution-opensuse ==1.1.1 - distributive ==0.6.2.1 - dl-fedora ==0.9 - - dlist ==0.8.0.8 + - dlist ==1.0 - dlist-instances ==0.1.1.1 - dlist-nonempty ==0.1.1 - dns ==4.0.1 - dockerfile ==0.2.0 - doclayout ==0.3.0.2 - doctemplates ==0.9 - - doctest ==0.16.3 + - doctest ==0.17 - doctest-discover ==0.2.0.0 - - doctest-driver-gen ==0.3.0.3 + - doctest-driver-gen ==0.3.0.4 - doctest-exitcode-stdio ==0.0 - doctest-extract ==0.1 - doctest-lib ==0.1 @@ -679,12 +674,12 @@ default-package-overrides: - elm-bridge ==0.6.1 - elm-core-sources ==1.0.0 - elm-export ==0.6.0.1 - - elynx ==0.5.0.2 - - elynx-markov ==0.5.0.2 - - elynx-nexus ==0.5.0.2 - - elynx-seq ==0.5.0.2 - - elynx-tools ==0.5.0.2 - - elynx-tree ==0.5.0.2 + - elynx ==0.5.1.1 + - elynx-markov ==0.5.1.1 + - elynx-nexus ==0.5.1.1 + - elynx-seq ==0.5.1.1 + - elynx-tools ==0.5.1.1 + - elynx-tree ==0.5.1.1 - email-validate ==2.3.2.13 - emd ==0.2.0.0 - emojis ==0.1 @@ -708,7 +703,7 @@ default-package-overrides: - errors ==2.3.0 - errors-ext ==0.4.2 - ersatz ==0.4.9 - - esqueleto ==3.4.1.1 + - esqueleto ==3.5.0.0 - essence-of-live-coding ==0.2.5 - essence-of-live-coding-gloss ==0.2.5 - essence-of-live-coding-pulse ==0.2.5 @@ -734,31 +729,31 @@ default-package-overrides: - expiring-cache-map ==0.0.6.1 - explicit-exception ==0.1.10 - exp-pairs ==0.2.1.0 - - express ==0.1.10 + - express ==0.1.14 - extended-reals ==0.2.4.0 - extensible-effects ==5.0.0.1 - extensible-exceptions ==0.1.1.4 - extra ==1.7.9 - extractable-singleton ==0.0.1 - - extrapolate ==0.4.4 + - extrapolate ==0.4.6 - fail ==4.9.0.0 - failable ==1.2.4.0 - fakedata ==0.8.0 - fakedata-parser ==0.1.0.0 - fakefs ==0.3.0.2 - fakepull ==0.3.0.2 - - faktory ==1.0.2.3 + - faktory ==1.0.3.1 - fast-digits ==0.3.0.0 - fast-logger ==3.0.5 - fast-math ==1.0.2 - fb ==2.1.1 - - fclabels ==2.0.5 + - fclabels ==2.0.5.1 - feature-flags ==0.1.0.1 - fedora-dists ==1.1.2 - fedora-haskell-tools ==0.9 - feed ==1.3.2.0 - FenwickTree ==0.1.2.1 - - fft ==0.1.8.6 + - fft ==0.1.8.7 - fgl ==5.7.0.3 - file-embed ==0.0.14.0 - file-embed-lzma ==0 @@ -775,7 +770,7 @@ default-package-overrides: - finite-typelits ==0.1.4.2 - first-class-families ==0.8.0.1 - first-class-patterns ==0.3.2.5 - - fitspec ==0.4.8 + - fitspec ==0.4.10 - fixed ==0.3 - fixed-length ==0.2.2.1 - fixed-vector ==1.2.0.0 @@ -808,10 +803,10 @@ default-package-overrides: - forkable-monad ==0.2.0.3 - forma ==1.1.3 - format-numbers ==0.1.0.1 - - formatting ==6.3.7 + - formatting ==7.1.2 - foundation ==0.0.26.1 - fourmolu ==0.3.0.0 - - free ==5.1.5 + - free ==5.1.7 - free-categories ==0.2.0.2 - freenect ==1.2.1 - freer-simple ==1.2.1.1 @@ -828,7 +823,7 @@ default-package-overrides: - function-builder ==0.3.0.1 - functor-classes-compat ==1.0.1 - functor-combinators ==0.3.6.0 - - fusion-plugin ==0.2.2 + - fusion-plugin ==0.2.3 - fusion-plugin-types ==0.1.0 - fuzzcheck ==0.1.1 - fuzzy ==0.1.0.0 @@ -844,7 +839,7 @@ default-package-overrides: - generic-constraints ==1.1.1.1 - generic-data ==0.9.2.0 - generic-data-surgery ==0.3.0.0 - - generic-deriving ==1.13.1 + - generic-deriving ==1.14 - generic-functor ==0.2.0.0 - generic-lens ==2.1.0.0 - generic-lens-core ==2.1.0.0 @@ -888,16 +883,16 @@ default-package-overrides: - geojson ==4.0.2 - getopt-generics ==0.13.0.4 - ghc-byteorder ==4.11.0.0.10 - - ghc-check ==0.5.0.4 + - ghc-check ==0.5.0.5 - ghc-core ==0.5.6 - ghc-events ==0.17.0 - ghc-exactprint ==0.6.4 - ghcid ==0.8.7 - ghci-hexcalc ==0.1.1.0 - ghcjs-codemirror ==0.0.0.2 - - ghc-lib ==8.10.4.20210206 - - ghc-lib-parser ==8.10.4.20210206 - - ghc-lib-parser-ex ==8.10.0.19 + - ghc-lib ==8.10.5.20210606 + - ghc-lib-parser ==8.10.5.20210606 + - ghc-lib-parser-ex ==8.10.0.21 - ghc-parser ==0.2.3.0 - ghc-paths ==0.1.0.12 - ghc-prof ==1.4.1.8 @@ -910,35 +905,34 @@ default-package-overrides: - ghc-typelits-natnormalise ==0.7.4 - ghc-typelits-presburger ==0.6.0.0 - ghost-buster ==0.1.1.0 - - gi-atk ==2.0.22 - - gi-cairo ==1.0.24 - - gi-cairo-connector ==0.1.0 - - gi-cairo-render ==0.1.0 - - gi-dbusmenu ==0.4.8 - - gi-dbusmenugtk3 ==0.4.9 - - gi-gdk ==3.0.23 - - gi-gdkpixbuf ==2.0.24 - - gi-gdkx11 ==3.0.10 - - gi-gio ==2.0.27 - - gi-glib ==2.0.24 - - gi-gobject ==2.0.25 - - gi-graphene ==1.0.2 - - gi-gtk ==3.0.36 - - gi-gtk-hs ==0.3.9 - - gi-harfbuzz ==0.0.3 + - gi-atk ==2.0.23 + - gi-cairo ==1.0.25 + - gi-dbusmenu ==0.4.9 + - gi-dbusmenugtk3 ==0.4.10 + - gi-gdk ==3.0.24 + - gi-gdkpixbuf ==2.0.26 + - gi-gdkx11 ==3.0.11 + - gi-gio ==2.0.28 + - gi-glib ==2.0.25 + - gi-gmodule ==2.0.1 + - gi-gobject ==2.0.26 + - gi-graphene ==1.0.3 + - gi-gtk ==3.0.37 + - gi-gtk-hs ==0.3.10 + - gi-harfbuzz ==0.0.4 - ginger ==0.10.1.0 - gingersnap ==0.3.1.0 - - gi-pango ==1.0.23 - - githash ==0.1.5.0 + - gi-pango ==1.0.24 + - githash ==0.1.6.0 - github-release ==1.3.7 - github-rest ==1.0.3 - github-types ==0.2.1 - github-webhooks ==0.15.0 - gitlab-haskell ==0.2.5 - gitrev ==1.3.1 - - gi-xlib ==2.0.9 + - gi-xlib ==2.0.10 - gl ==0.9 - - glabrous ==2.0.3 + - glabrous ==2.0.4 - GLFW-b ==3.3.0.0 - Glob ==0.10.1 - gloss ==1.13.2.1 @@ -947,6 +941,7 @@ default-package-overrides: - GLUT ==2.7.0.16 - gluturtle ==0.0.58.1 - gnuplot ==0.5.6.1 + - goldplate ==0.2.0 - google-isbn ==1.0.3 - gopher-proxy ==0.1.1.2 - gothic ==0.1.6 @@ -965,25 +960,25 @@ default-package-overrides: - groom ==0.1.2.1 - group-by-date ==0.1.0.4 - groups ==0.5.3 - - gtk-sni-tray ==0.1.6.2 - gtk-strut ==0.1.3.0 - guarded-allocation ==0.0.1 - H ==0.9.0.1 - hackage-db ==2.1.1 - hackage-security ==0.6.0.1 - - haddock-library ==1.9.0 + - haddock-library ==1.10.0 - hadoop-streaming ==0.2.0.3 - hakyll-convert ==0.3.0.4 + - hal ==0.4.8 - half ==0.3.1 - hall-symbols ==0.1.0.6 - hamtsolo ==1.0.3 - HandsomeSoup ==0.4.2 - - hapistrano ==0.4.1.3 - - happstack-server ==7.7.0 + - hapistrano ==0.4.2.0 + - happstack-server ==7.7.1 - happy ==1.20.0 - happy-meta ==0.2.0.11 - HasBigDecimal ==0.1.1 - - hasbolt ==0.1.4.5 + - hasbolt ==0.1.5.0 - hashable ==1.3.0.0 - hashable-time ==0.2.1 - hashids ==1.0.2.4 @@ -992,8 +987,8 @@ default-package-overrides: - hashtables ==1.2.4.1 - haskeline ==0.8.1.2 - haskell-awk ==1.2.0.1 - - haskell-gi ==0.24.7 - - haskell-gi-base ==0.24.5 + - haskell-gi ==0.25.0 + - haskell-gi-base ==0.25.0 - haskell-gi-overloading ==1.0 - haskell-import-graph ==1.0.4 - haskell-lexer ==1.1 @@ -1039,6 +1034,8 @@ default-package-overrides: - hexpat ==0.20.13 - hformat ==0.3.3.1 - hfsevents ==0.1.6 + - hgeometry ==0.12.0.4 + - hgeometry-combinatorial ==0.12.0.3 - hgrev ==0.2.6 - hidapi ==0.1.7 - hie-bios ==0.7.5 @@ -1051,9 +1048,17 @@ default-package-overrides: - hjsmin ==0.2.0.4 - hkd-default ==1.1.0.0 - hkgr ==0.3 + - hledger ==1.21 + - hledger-iadd ==1.3.14 + - hledger-interest ==1.6.1 + - hledger-lib ==1.21 + - hledger-stockquotes ==0.1.2.0 + - hledger-ui ==1.21 + - hledger-web ==1.21 - hlibcpuid ==0.2.0 - hlibgit2 ==0.18.0.16 - hlibsass ==0.1.10.1 + - hlint ==3.2.7 - hmatrix ==0.20.2 - hmatrix-backprop ==0.1.3.0 - hmatrix-gsl ==0.19.0.1 @@ -1064,8 +1069,10 @@ default-package-overrides: - hmpfr ==0.4.4 - hnock ==0.4.0 - hoauth2 ==1.16.0 + - hoogle ==5.0.18.1 - hOpenPGP ==2.9.5 - hopenpgp-tools ==0.23.6 + - hopenssl ==2.2.4 - hopfli ==0.2.2.1 - hosc ==0.18.1 - hostname ==1.0 @@ -1115,7 +1122,7 @@ default-package-overrides: - hspec-golden-aeson ==0.7.0.0 - hspec-hedgehog ==0.0.1.2 - hspec-junit-formatter ==1.0.0.4 - - hspec-leancheck ==0.0.4 + - hspec-leancheck ==0.0.6 - hspec-megaparsec ==2.2.0 - hspec-meta ==2.7.8 - hspec-need-env ==0.1.0.7 @@ -1139,7 +1146,7 @@ default-package-overrides: - html-entities ==1.1.4.5 - html-entity-map ==0.1.0.0 - htoml ==1.0.0.3 - - http2 ==3.0.1 + - http2 ==3.0.2 - HTTP ==4000.3.16 - http-api-data ==0.4.2 - http-client ==0.6.4.1 @@ -1179,12 +1186,10 @@ default-package-overrides: - hw-hspec-hedgehog ==0.1.1.0 - hw-int ==0.0.2.0 - hw-ip ==2.4.2.0 - - hw-json ==1.3.2.2 - hw-json-simd ==0.1.1.0 - hw-json-simple-cursor ==0.1.1.0 - hw-json-standard-cursor ==0.2.3.1 - hw-kafka-client ==4.0.3 - - hw-mquery ==0.2.1.0 - hw-packed-vector ==0.2.1.0 - hw-parser ==0.1.1.0 - hw-prim ==0.6.3.0 @@ -1240,7 +1245,7 @@ default-package-overrides: - inline-r ==0.10.4 - inliterate ==0.1.0 - input-parsers ==0.2.2 - - insert-ordered-containers ==0.2.4 + - insert-ordered-containers ==0.2.5 - inspection-testing ==0.4.5.0 - instance-control ==0.1.2.0 - int-cast ==0.2.0.0 @@ -1267,7 +1272,7 @@ default-package-overrides: - io-streams ==1.5.2.1 - io-streams-haproxy ==1.0.1.0 - ip6addr ==1.0.2 - - ipa ==0.3.1 + - ipa ==0.3.1.1 - iproute ==1.7.11 - IPv6Addr ==2.0.2 - ipynb ==0.1.0.1 @@ -1289,7 +1294,7 @@ default-package-overrides: - ix-shapable ==0.1.0 - jack ==0.7.2 - jalaali ==1.0.0.0 - - jira-wiki-markup ==1.3.4 + - jira-wiki-markup ==1.4.0 - jose ==0.8.4 - jose-jwt ==0.9.2 - js-chart ==2.9.4.1 @@ -1297,12 +1302,13 @@ default-package-overrides: - js-flot ==0.8.3 - js-jquery ==3.3.1 - json-feed ==1.0.13 + - jsonifier ==0.1.1 - jsonpath ==0.2.0.0 - json-rpc ==1.0.3 - json-rpc-generic ==0.2.1.5 - JuicyPixels ==3.3.5 - JuicyPixels-blurhash ==0.1.0.3 - - JuicyPixels-extra ==0.5.0 + - JuicyPixels-extra ==0.5.1 - JuicyPixels-scale-dct ==0.1.2 - junit-xml ==0.1.0.2 - justified-containers ==0.3.0.0 @@ -1334,7 +1340,7 @@ default-package-overrides: - lame ==0.2.0 - language-avro ==0.1.3.1 - language-bash ==0.9.2 - - language-c ==0.8.3 + - language-c ==0.9.0.1 - language-c-quote ==0.13 - language-docker ==10.0.1 - language-java ==0.2.9 @@ -1355,7 +1361,7 @@ default-package-overrides: - lazyio ==0.1.0.4 - lazysmallcheck ==0.6 - lca ==0.4 - - leancheck ==0.9.4 + - leancheck ==0.9.10 - leancheck-instances ==0.0.4 - leapseconds-announced ==2017.1.0.1 - learn-physics ==0.6.5 @@ -1402,6 +1408,7 @@ default-package-overrides: - list-t ==1.0.4 - list-transformer ==1.0.7 - ListTree ==0.2.3 + - literatex ==0.1.0.2 - little-rio ==0.2.2 - llvm-hs ==9.0.1 - llvm-hs-pure ==9.0.0 @@ -1443,7 +1450,7 @@ default-package-overrides: - markdown ==0.1.17.4 - markdown-unlit ==0.5.1 - markov-chain ==0.0.3.4 - - massiv ==0.6.0.0 + - massiv ==0.6.1.0 - massiv-io ==0.4.1.0 - massiv-persist ==0.1.0.0 - massiv-serialise ==0.1.0.0 @@ -1460,7 +1467,7 @@ default-package-overrides: - maximal-cliques ==0.1.1 - mbox ==0.3.4 - mbox-utility ==0.0.3.1 - - mcmc ==0.4.0.0 + - mcmc ==0.5.0.0 - mcmc-types ==1.0.3 - medea ==1.2.0 - median-stream ==0.7.0.0 @@ -1473,6 +1480,7 @@ default-package-overrides: - mercury-api ==0.1.0.2 - mergeful ==0.2.0.0 - mergeless ==0.3.0.0 + - mersenne-random ==1.0.0.1 - mersenne-random-pure64 ==0.2.2.0 - messagepack ==0.5.4 - metrics ==0.4.1.1 @@ -1501,7 +1509,7 @@ default-package-overrides: - min-max-pqueue ==0.1.0.2 - mintty ==0.1.2 - missing-foreign ==0.1.1 - - mixed-types-num ==0.5.3.1 + - mixed-types-num ==0.5.8.0 - mltool ==0.2.0.1 - mmap ==0.5.9 - mmark ==0.0.7.2 @@ -1519,7 +1527,7 @@ default-package-overrides: - monad-chronicle ==1.0.0.1 - monad-control ==1.0.2.3 - monad-control-aligned ==0.0.1.1 - - monad-coroutine ==0.9.1 + - monad-coroutine ==0.9.1.2 - monad-extras ==0.6.0 - monadic-arrays ==0.2.2 - monad-journal ==0.8.1 @@ -1546,8 +1554,8 @@ default-package-overrides: - monad-time ==0.3.1.0 - monad-unlift ==0.2.0 - monad-unlift-ref ==0.2.1 - - mongoDB ==2.7.0.0 - - monoid-subclasses ==1.0.1 + - mongoDB ==2.7.1.1 + - monoid-subclasses ==1.1 - monoid-transformer ==0.0.4 - mono-traversable ==1.0.15.1 - mono-traversable-instances ==0.1.1.0 @@ -1577,7 +1585,7 @@ default-package-overrides: - mustache ==2.3.1 - mutable-containers ==0.3.4 - mwc-probability ==2.3.1 - - mwc-random ==0.14.0.0 + - mwc-random ==0.15.0.1 - mwc-random-monad ==0.7.3.1 - mx-state-codes ==1.0.0.0 - mysql ==0.2.0.1 @@ -1597,6 +1605,8 @@ default-package-overrides: - netlib-carray ==0.1 - netlib-comfort-array ==0.0.0.1 - netlib-ffi ==0.1.1 + - net-mqtt ==0.7.1.1 + - net-mqtt-lens ==0.1.0.0 - netpbm ==1.0.4 - nettle ==0.3.0 - netwire ==5.0.3 @@ -1636,23 +1646,24 @@ default-package-overrides: - nowdoc ==0.1.1.0 - nqe ==0.6.3 - nri-env-parser ==0.1.0.7 - - nri-observability ==0.1.0.2 - - nri-prelude ==0.6.0.0 + - nri-observability ==0.1.0.3 + - nri-prelude ==0.6.0.2 - nsis ==0.3.3 - numbers ==3000.2.0.2 - numeric-extras ==0.1 + - numeric-limits ==0.1.0.0 - numeric-prelude ==0.4.3.3 - numhask ==0.7.1.0 - NumInstances ==1.4 - - numtype-dk ==0.5.0.2 + - numtype-dk ==0.5.0.3 - nuxeo ==0.3.2 - nvim-hs ==2.1.0.4 - nvim-hs-contrib ==2.0.0.0 - nvim-hs-ghcid ==2.0.0.0 - oauthenticated ==0.2.1.0 - ObjectName ==1.1.0.1 - - o-clock ==1.2.0.1 - - odbc ==0.2.2 + - o-clock ==1.2.1 + - odbc ==0.2.5 - oeis2 ==1.0.5 - ofx ==0.4.4.0 - old-locale ==1.0.0.7 @@ -1672,10 +1683,10 @@ default-package-overrides: - openpgp-asciiarmor ==0.1.2 - opensource ==0.1.1.0 - openssl-streams ==1.2.3.0 - - opentelemetry ==0.6.1 - - opentelemetry-extra ==0.6.1 - - opentelemetry-lightstep ==0.6.1 - - opentelemetry-wai ==0.6.1 + - opentelemetry ==0.7.0 + - opentelemetry-extra ==0.7.0 + - opentelemetry-lightstep ==0.7.0 + - opentelemetry-wai ==0.7.0 - operational ==0.2.3.5 - operational-class ==0.3.0.0 - optics ==0.3 @@ -1697,12 +1708,12 @@ default-package-overrides: - pager ==0.1.1.0 - pagination ==0.2.2 - pagure-cli ==0.2 - - pandoc ==2.13 + - pandoc ==2.14.0.2 - pandoc-dhall-decoder ==0.1.0.1 - - pandoc-plot ==1.2.1 + - pandoc-plot ==1.2.3 - pandoc-throw ==0.1.0.0 - pandoc-types ==1.22 - - pantry ==0.5.2.1 + - pantry ==0.5.2.2 - parallel ==3.2.2.0 - parameterized ==0.5.0.0 - paripari ==0.7.0.0 @@ -1716,48 +1727,47 @@ default-package-overrides: - parsers ==0.12.10 - partial-handler ==1.0.3 - partial-isomorphisms ==0.2.2.1 - - partial-semigroup ==0.5.1.8 + - partial-semigroup ==0.5.1.12 - password ==3.0.0.0 - password-instances ==3.0.0.0 - password-types ==1.0.0.0 - - path ==0.7.1 + - path ==0.8.0 - path-binary-instance ==0.1.0.1 - path-extensions ==0.1.1.0 - path-extra ==0.2.0 - - path-io ==1.6.2 + - path-io ==1.6.3 - path-like ==0.2.0.2 - path-pieces ==0.2.1 - - path-text-utf8 ==0.0.1.6 + - path-text-utf8 ==0.0.1.8 - pathtype ==0.8.1.1 - pathwalk ==0.3.1.2 - pattern-arrows ==0.0.2 - pava ==0.1.1.1 - pcg-random ==0.1.3.7 - - pcre2 ==1.1.4 + - pcre2 ==1.1.5 - pcre-heavy ==1.0.0.2 - pcre-light ==0.4.1.0 - pcre-utils ==0.1.8.2 - pdfinfo ==1.5.4 - peano ==0.1.0.1 - pem ==0.2.4 - - percent-format ==0.0.1 + - percent-format ==0.0.2 - peregrin ==0.3.1 - perfect-hash-generator ==0.2.0.6 - perfect-vector-shuffle ==0.1.1.1 - persist ==0.1.1.5 - persistable-record ==0.6.0.5 - persistable-types-HDBC-pg ==0.0.3.5 - - persistent ==2.11.0.4 - - persistent-documentation ==0.1.0.2 - - persistent-mtl ==0.2.1.0 - - persistent-mysql ==2.10.3.1 + - persistent ==2.13.0.2 + - persistent-mtl ==0.2.2.0 + - persistent-mysql ==2.13.0.1 - persistent-pagination ==0.1.1.2 - - persistent-postgresql ==2.11.0.1 - - persistent-qq ==2.9.2.1 - - persistent-sqlite ==2.11.1.0 - - persistent-template ==2.9.1.0 - - persistent-test ==2.0.3.5 - - persistent-typed-db ==0.1.0.2 + - persistent-postgresql ==2.13.0.2 + - persistent-qq ==2.12.0.1 + - persistent-sqlite ==2.13.0.3 + - persistent-template ==2.12.0.0 + - persistent-test ==2.13.0.3 + - persistent-typed-db ==0.1.0.4 - pg-harness-client ==0.6.0 - pgp-wordlist ==0.1.0.3 - pg-transact ==0.3.1.1 @@ -1845,11 +1855,12 @@ default-package-overrides: - product-isomorphic ==0.0.3.3 - product-profunctors ==0.11.0.2 - profiterole ==0.1 - - profunctors ==5.5.2 + - profunctors ==5.6.2 - projectroot ==0.2.0.1 - project-template ==0.2.1.0 - prometheus ==2.2.2 - prometheus-client ==1.0.1 + - prometheus-metrics-ghc ==1.0.1.1 - prometheus-wai-middleware ==1.0.1.0 - promises ==0.3 - prompt ==0.1.1.2 @@ -1861,20 +1872,16 @@ default-package-overrides: - protocol-buffers-descriptor ==2.4.17 - protocol-radius ==0.0.1.1 - protocol-radius-test ==0.1.0.1 - - proto-lens ==0.7.0.0 - - proto-lens-protobuf-types ==0.7.0.0 - - proto-lens-protoc ==0.7.0.0 - - proto-lens-runtime ==0.7.0.0 - - proto-lens-setup ==0.4.0.4 - protolude ==0.3.0 - proxied ==0.3.1 - psqueues ==0.2.7.2 + - ptr-poker ==0.1.1.4 - publicsuffix ==0.20200526 - pulse-simple ==0.1.14 - pureMD5 ==2.1.3 - purescript-bridge ==0.14.0.0 - pushbullet-types ==0.4.1.0 - - pusher-http-haskell ==2.1.0.2 + - pusher-http-haskell ==2.1.0.3 - pvar ==1.0.0.0 - PyF ==0.9.0.3 - qchas ==1.1.0.1 @@ -1917,7 +1924,7 @@ default-package-overrides: - range-set-list ==0.1.3.1 - rank1dynamic ==0.4.1 - rank2classes ==1.4.1 - - Rasterific ==0.7.5.3 + - Rasterific ==0.7.5.4 - rasterific-svg ==0.3.3.2 - ratel ==1.0.15 - rate-limit ==1.4.2 @@ -1935,8 +1942,10 @@ default-package-overrides: - readable ==0.3.1 - read-editor ==0.1.0.2 - read-env-var ==1.0.0.0 - - rebase ==1.6.1 - - record-dot-preprocessor ==0.2.10 + - reanimate ==1.1.4.0 + - reanimate-svg ==0.13.0.1 + - rebase ==1.13.0.1 + - record-dot-preprocessor ==0.2.11 - record-hasfield ==1.0 - records-sop ==0.1.1.0 - record-wrangler ==0.1.1.0 @@ -1961,7 +1970,7 @@ default-package-overrides: - regex-pcre ==0.95.0.0 - regex-pcre-builtin ==0.95.2.3.8.43 - regex-posix ==0.96.0.0 - - regex-tdfa ==1.3.1.0 + - regex-tdfa ==1.3.1.1 - regex-with-pcre ==1.1.0.0 - registry ==0.2.0.3 - reinterpret-cast ==0.1.0 @@ -1978,7 +1987,7 @@ default-package-overrides: - repline ==0.4.0.0 - req ==3.9.0 - req-conduit ==1.0.0 - - rerebase ==1.6.1 + - rerebase ==1.13.0.1 - rescue ==0.4.2.1 - resistor-cube ==0.0.1.2 - resolv ==0.1.2.0 @@ -2005,15 +2014,16 @@ default-package-overrides: - rope-utf16-splay ==0.3.2.0 - rosezipper ==0.2 - rot13 ==0.2.0.1 - - rpmbuild-order ==0.4.4 - - rp-tree ==0.3.5 + - rpmbuild-order ==0.4.5 + - rp-tree ==0.6 - RSA ==2.4.1 - runmemo ==1.0.0.1 - rvar ==0.2.0.6 - safe ==0.3.19 - - safe-coloured-text ==0.0.0.0 + - safe-coloured-text ==0.1.0.0 + - safe-coloured-text-terminfo ==0.0.0.0 - safecopy ==0.10.4.2 - - safe-decimal ==0.2.0.0 + - safe-decimal ==0.2.1.0 - safe-exceptions ==0.1.7.1 - safe-foldable ==0.1.0.0 - safeio ==0.0.5.0 @@ -2021,26 +2031,24 @@ default-package-overrides: - safe-money ==0.9 - SafeSemaphore ==0.10.1 - safe-tensor ==0.2.1.1 - - salak ==0.3.6 - - salak-yaml ==0.3.5.3 - saltine ==0.1.1.1 - salve ==1.0.11 - sample-frame ==0.0.3 - sample-frame-np ==0.0.4.1 - sampling ==0.3.5 - - sandwich ==0.1.0.6 + - sandwich ==0.1.0.8 - sandwich-quickcheck ==0.1.0.5 - sandwich-slack ==0.1.0.4 - - sandwich-webdriver ==0.1.0.4 + - sandwich-webdriver ==0.1.0.5 - say ==0.1.0.1 - sbp ==2.6.3 - - sbv ==8.14 + - sbv ==8.15 - scalpel ==0.6.2 - scalpel-core ==0.6.2 - scanf ==0.1.0.0 - scanner ==0.3.1 - scheduler ==1.5.0 - - scientific ==0.3.6.2 + - scientific ==0.3.7.0 - scotty ==0.12 - scrypt ==0.5.0 - sdl2 ==2.5.3.0 @@ -2072,7 +2080,7 @@ default-package-overrides: - seqid ==0.6.2 - seqid-streams ==0.7.2 - sequence-formats ==1.6.1 - - sequenceTools ==1.4.0.5 + - sequenceTools ==1.5.0 - serf ==0.1.1.0 - serialise ==0.2.3.0 - servant ==0.18.2 @@ -2081,6 +2089,7 @@ default-package-overrides: - servant-auth-docs ==0.2.10.0 - servant-auth-server ==0.4.6.0 - servant-auth-swagger ==0.2.10.1 + - servant-auth-wordpress ==1.0.0.2 - servant-blaze ==0.9.1 - servant-client ==0.18.2 - servant-client-core ==0.18.2 @@ -2093,7 +2102,8 @@ default-package-overrides: - servant-foreign ==0.15.3 - servant-http-streams ==0.18.2 - servant-machines ==0.15.1 - - servant-multipart ==0.12 + - servant-multipart ==0.12.1 + - servant-multipart-api ==0.12.1 - servant-openapi3 ==2.0.1.2 - servant-pipes ==0.15.2 - servant-rawm ==1.0.0.0 @@ -2110,11 +2120,13 @@ default-package-overrides: - setlocale ==1.0.0.10 - sexp-grammar ==2.3.0 - SHA ==1.6.4.4 + - shake ==0.19.4 - shake-language-c ==0.12.0 - shake-plus ==0.3.3.1 - shake-plus-extended ==0.4.1.0 - shakespeare ==2.0.25 - shared-memory ==0.2.0.0 + - ShellCheck ==0.7.2 - shell-conduit ==5.0.0 - shell-escape ==0.2.0 - shellmet ==0.0.4.0 @@ -2155,7 +2167,7 @@ default-package-overrides: - slack-progressbar ==0.1.0.1 - slick ==1.1.1.0 - slist ==0.2.0.0 - - slynx ==0.5.0.2 + - slynx ==0.5.1.1 - smallcheck ==1.2.1 - smash ==0.1.2 - smash-aeson ==0.1.0.0 @@ -2184,14 +2196,14 @@ default-package-overrides: - sparse-tensor ==0.2.1.5 - spatial-math ==0.5.0.1 - special-values ==0.1.0.0 - - speculate ==0.4.6 + - speculate ==0.4.10 - speedy-slice ==0.3.2 - Spintax ==0.3.6 - splice ==0.6.1.1 - splint ==1.0.1.4 - split ==0.2.3.4 - splitmix ==0.1.0.3 - - splitmix-distributions ==0.8.0.0 + - splitmix-distributions ==0.9.0.0 - spoon ==0.3.1 - spreadsheet ==0.1.3.8 - sqlcli ==0.2.2.0 @@ -2202,6 +2214,7 @@ default-package-overrides: - squeather ==0.8.0.0 - srcloc ==0.6 - stache ==2.3.0 + - stack ==2.7.1 - stackcollapse-ghc ==0.0.1.3 - stack-templatizer ==0.1.0.2 - stateref ==0.3 @@ -2213,10 +2226,8 @@ default-package-overrides: - step-function ==0.2 - stm-chans ==3.0.0.4 - stm-conduit ==4.0.1 - - stm-containers ==1.2 - stm-delay ==0.1.1.1 - stm-extras ==0.1.0.3 - - stm-hamt ==1.2.0.6 - stm-lifted ==2.5.0.0 - STMonadTrans ==0.4.5 - stm-split ==0.0.2.1 @@ -2237,6 +2248,7 @@ default-package-overrides: - streaming-commons ==0.2.2.1 - streamly ==0.7.3 - streams ==3.3 + - streamt ==0.5.0.0 - strict ==0.4.0.1 - strict-concurrency ==0.2.4.3 - strict-list ==0.1.5 @@ -2247,12 +2259,12 @@ default-package-overrides: - string-combinators ==0.6.0.5 - string-conv ==0.1.2 - string-conversions ==0.4.0.1 - - string-interpolate ==0.3.1.0 + - string-interpolate ==0.3.1.1 - string-qq ==0.0.4 - string-random ==0.1.4.1 - stringsearch ==0.3.6.6 - string-transform ==1.1.1 - - stripe-concepts ==1.0.2.6 + - stripe-concepts ==1.0.2.8 - stripe-core ==2.6.2 - stripe-haskell ==2.6.2 - stripe-http-client ==2.6.2 @@ -2268,14 +2280,14 @@ default-package-overrides: - swagger ==0.3.0 - swagger2 ==2.6 - sweet-egison ==0.1.1.3 - - swish ==0.10.0.4 + - swish ==0.10.0.5 - syb ==0.7.2.1 - - sydtest ==0.1.0.0 + - sydtest ==0.2.0.0 - sydtest-discover ==0.0.0.0 - - sydtest-persistent-sqlite ==0.0.0.0 - - sydtest-servant ==0.0.0.0 - - sydtest-wai ==0.0.0.0 - - sydtest-yesod ==0.0.0.0 + - sydtest-persistent-sqlite ==0.1.0.0 + - sydtest-servant ==0.1.0.0 + - sydtest-wai ==0.1.0.0 + - sydtest-yesod ==0.1.0.0 - symbol ==0.2.4 - symengine ==0.1.2.0 - symmetry-operations-symbols ==0.0.2.1 @@ -2306,13 +2318,13 @@ default-package-overrides: - tasty-expected-failure ==0.12.3 - tasty-focus ==1.0.1 - tasty-golden ==2.3.4 - - tasty-hedgehog ==1.0.1.0 + - tasty-hedgehog ==1.1.0.0 - tasty-hspec ==1.1.6 - tasty-hunit ==0.10.0.3 - tasty-hunit-compat ==0.2.0.1 - tasty-inspection-testing ==0.1 - tasty-kat ==0.0.3 - - tasty-leancheck ==0.0.1 + - tasty-leancheck ==0.0.2 - tasty-lua ==0.2.3.2 - tasty-program ==1.0.5 - tasty-quickcheck ==0.10.1.2 @@ -2322,7 +2334,7 @@ default-package-overrides: - tasty-test-reporter ==0.1.1.4 - tasty-th ==0.1.7 - tasty-wai ==0.1.1.1 - - Taxonomy ==2.1.0 + - Taxonomy ==2.2.0 - TCache ==0.12.1 - tce-conf ==1.3 - tdigest ==0.2.1.1 @@ -2337,18 +2349,18 @@ default-package-overrides: - terminal-size ==0.3.2.1 - test-framework ==0.8.2.0 - test-framework-hunit ==0.3.0.2 - - test-framework-leancheck ==0.0.1 + - test-framework-leancheck ==0.0.4 - test-framework-quickcheck2 ==0.3.0.5 - test-framework-smallcheck ==0.2 - test-fun ==0.1.0.0 - testing-type-modifiers ==0.1.0.1 - - texmath ==0.12.2 + - texmath ==0.12.3 - text-ansi ==0.1.1 - text-binary ==0.2.1.1 - text-builder ==0.6.6.2 - text-conversions ==0.3.1 - text-format ==0.3.2 - - text-icu ==0.7.0.1 + - text-icu ==0.7.1.0 - text-latin1 ==0.3.1 - text-ldap ==0.1.1.13 - textlocal ==0.1.0.5 @@ -2396,7 +2408,7 @@ default-package-overrides: - th-test-utils ==1.1.0 - th-utilities ==0.2.4.3 - thyme ==0.3.5.5 - - tidal ==1.7.4 + - tidal ==1.7.5 - tile ==0.3.0.0 - time-compat ==1.9.5 - timeit ==2.0 @@ -2417,7 +2429,7 @@ default-package-overrides: - tls ==1.5.5 - tls-debug ==0.4.8 - tls-session-manager ==0.0.4 - - tlynx ==0.5.0.2 + - tlynx ==0.5.1.1 - tmapchan ==0.0.3 - tmapmvar ==0.0.4 - tmp-postgres ==1.34.1.0 @@ -2439,7 +2451,7 @@ default-package-overrides: - triplesec ==0.2.2.1 - trivial-constraint ==0.7.0.0 - tsv2csv ==0.1.0.2 - - ttc ==0.4.0.0 + - ttc ==1.1.0.0 - ttl-hashtables ==1.4.1.0 - ttrie ==0.1.2.1 - tuple ==0.3.0.2 @@ -2481,9 +2493,11 @@ default-package-overrides: - unexceptionalio ==0.5.1 - unexceptionalio-trans ==0.5.1 - unicode ==0.0.1.1 + - unicode-collation ==0.1.3 - unicode-show ==0.1.0.4 - unicode-transforms ==0.3.7.1 - unification-fd ==0.11.1 + - union-angle ==0.1.0.1 - union-find ==0.2 - unipatterns ==0.0.0.0 - uniplate ==1.6.13 @@ -2505,12 +2519,12 @@ default-package-overrides: - unix-bytestring ==0.3.7.3 - unix-compat ==0.5.3 - unix-time ==0.4.7 - - unliftio ==0.2.16 + - unliftio ==0.2.18 - unliftio-core ==0.2.0.1 - unliftio-pool ==0.2.1.1 - unliftio-streams ==0.1.1.1 - unlit ==0.4.0.0 - - unordered-containers ==0.2.13.0 + - unordered-containers ==0.2.14.0 - unsafe ==0.0 - urbit-hob ==0.3.3 - uri-bytestring ==0.3.3.0 @@ -2542,6 +2556,7 @@ default-package-overrides: - validity-vector ==0.2.0.3 - valor ==0.1.0.0 - vault ==0.3.1.5 + - vcs-ignore ==0.0.1.0 - vec ==0.4 - vector ==0.12.3.0 - vector-algorithms ==0.8.0.4 @@ -2558,12 +2573,12 @@ default-package-overrides: - vector-split ==1.0.0.2 - vector-th-unbox ==0.2.1.9 - verbosity ==0.4.0.0 - - versions ==4.0.3 + - versions ==5.0.0 - vformat ==0.14.1.0 - vformat-aeson ==0.1.0.1 - vformat-time ==0.1.0.0 - ViennaRNAParser ==1.3.3 - - vinyl ==0.13.2 + - vinyl ==0.13.3 - void ==0.7.3 - vty ==5.33 - wai ==3.2.3 @@ -2576,9 +2591,10 @@ default-package-overrides: - wai-feature-flags ==0.1.0.1 - wai-handler-launch ==3.0.3.1 - wai-logger ==2.3.6 - - wai-middleware-auth ==0.2.4.1 + - wai-middleware-auth ==0.2.5.0 - wai-middleware-caching ==0.1.0.2 - wai-middleware-clacks ==0.1.0.1 + - wai-middleware-prometheus ==1.0.0 - wai-middleware-static ==0.9.0 - wai-rate-limit ==0.1.0.0 - wai-rate-limit-redis ==0.1.0.0 @@ -2588,12 +2604,11 @@ default-package-overrides: - wai-slack-middleware ==0.2.0 - wai-websockets ==3.0.1.2 - wakame ==0.1.0.0 - - warp ==3.3.15 - - warp-tls ==3.3.0 + - warp ==3.3.16 + - warp-tls ==3.3.1 - warp-tls-uid ==0.2.0.6 - wave ==0.2.0 - wcwidth ==0.0.2 - - webby ==1.0.1 - webdriver ==0.9.0.1 - webex-teams-api ==0.2.0.1 - webex-teams-conduit ==0.2.0.1 @@ -2606,11 +2621,11 @@ default-package-overrides: - wide-word ==0.1.1.2 - wikicfp-scraper ==0.1.0.12 - wild-bind ==0.1.2.7 - - wild-bind-x11 ==0.2.0.12 + - wild-bind-x11 ==0.2.0.13 - Win32 ==2.6.1.0 - Win32-notify ==0.3.0.3 - windns ==0.1.0.1 - - witch ==0.3.1.0 + - witch ==0.3.3.0 - witherable ==0.4.1 - within ==0.2.0.1 - with-location ==0.1.0 @@ -2621,6 +2636,7 @@ default-package-overrides: - wl-pprint-text ==1.2.0.1 - word24 ==2.0.1 - word8 ==0.1.3 + - wordpress-auth ==1.0.0.1 - word-trie ==0.3.0 - word-wrap ==0.4.1 - world-peace ==1.0.2.0 @@ -2631,7 +2647,7 @@ default-package-overrides: - writer-cps-transformers ==0.5.6.1 - wss-client ==0.3.0.0 - wuss ==1.1.18 - - X11 ==1.9.2 + - X11 ==1.10 - X11-xft ==0.3.1 - x11-xim ==0.0.9.0 - x509 ==1.7.5 @@ -2664,19 +2680,19 @@ default-package-overrides: - xss-sanitize ==0.3.6 - xxhash-ffi ==0.2.0.0 - yaml ==0.11.5.0 - - yamlparse-applicative ==0.1.0.3 + - yamlparse-applicative ==0.2.0.0 - yesod ==1.6.1.1 - yesod-auth ==1.6.10.3 - - yesod-auth-hashdb ==1.7.1.6 + - yesod-auth-hashdb ==1.7.1.7 - yesod-auth-oauth2 ==0.6.3.4 - yesod-bin ==1.6.1 - - yesod-core ==1.6.20 + - yesod-core ==1.6.20.1 - yesod-fb ==0.6.1 - - yesod-form ==1.6.7 + - yesod-form ==1.7.0 - yesod-gitrev ==0.2.1 - yesod-markdown ==0.12.6.11 - yesod-newsfeed ==1.7.0.0 - - yesod-page-cursor ==2.0.0.7 + - yesod-page-cursor ==2.0.0.8 - yesod-paginator ==1.1.1.0 - yesod-persistent ==1.6.0.7 - yesod-sitemap ==1.6.0 @@ -2696,7 +2712,7 @@ default-package-overrides: - zeromq4-patterns ==0.3.1.0 - zim-parser ==0.2.1.0 - zio ==0.1.0.2 - - zip ==1.7.0 + - zip ==1.7.1 - zip-archive ==0.4.1 - zipper-extra ==0.1.3.2 - zippers ==0.3.1 diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/transitive-broken.yaml b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/transitive-broken.yaml index 20d6617d3c..5c38f0b040 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/transitive-broken.yaml +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-hackage2nix/transitive-broken.yaml @@ -20,7 +20,6 @@ dont-distribute-packages: - activehs - actor - AC-Vector-Fancy - - addy - adhoc-network - adict - ADPfusionForest @@ -117,10 +116,8 @@ dont-distribute-packages: - atp - AttoJson - attoparsec-enumerator - - attoparsec-ip - attoparsec-iteratee - attoparsec-text-enumerator - - attoparsec-uri - atuin - audiovisual - aura @@ -168,7 +165,6 @@ dont-distribute-packages: - Barracuda - base16-lens - base32-bytestring - - base62 - base64-bytes - baserock-schema - BASIC @@ -309,10 +305,8 @@ dont-distribute-packages: - buster-network - butterflies - bv-sized-lens - - bytebuild - bytehash - bytelog - - bytesmith - bytestring-read - c0check - cabal2arch @@ -327,6 +321,7 @@ dont-distribute-packages: - cakyrespa - cal3d-examples - cal3d-opengl + - calamity-commands - calc - calculator - caldims @@ -399,9 +394,7 @@ dont-distribute-packages: - claferwiki - clash - clash-ghc - - clash-ghc_1_4_2 - clash-lib - - clash-lib_1_4_2 - clash-multisignal - clash-prelude-quickcheck - clash-systemverilog @@ -440,8 +433,10 @@ dont-distribute-packages: - cnc-spec-compiler - Coadjute - codec + - code-conjure - codec-rpm - codemonitor + - co-feldspar - cognimeta-utils - coinbase-exchange - colada @@ -623,10 +618,7 @@ dont-distribute-packages: - dewdrop - dfinity-radix-tree - dhall-docs - - dhcp-lease-parser - dia-functions - - diagrams-braille - - diagrams-builder - diagrams-haddock - diagrams-html5 - diagrams-pandoc @@ -641,6 +633,7 @@ dont-distribute-packages: - dingo-widgets - diplomacy - diplomacy-server + - di-polysemy - dirfiles - discogs-haskell - discord-gateway @@ -705,6 +698,7 @@ dont-distribute-packages: - Dust-tools-pcap - dvda - dynamic-cabal + - dynamic-pipeline - dynamic-plot - dynobud - DysFRP-Cairo @@ -782,9 +776,9 @@ dont-distribute-packages: - extemp - extensible-data - extract-dependencies + - extrapolate - Facts - factual-api - - fadno-braids - FailureT - fakedata-quickcheck - fallingblocks @@ -938,6 +932,10 @@ dont-distribute-packages: - geodetic - geolite-csv - getemx + - ghc-debug-brick + - ghc-debug-client + - ghc-debug-common + - ghc-debug-stub - ghc-imported-from - ghc-instances - ghci-pretty @@ -970,9 +968,10 @@ dont-distribute-packages: - global-config - glome-hs - GlomeView - - gloss-banana + - gloss-accelerate - gloss-devil - gloss-examples + - gloss-raster-accelerate - gloss-sodium - gmap - gmndl @@ -1086,28 +1085,8 @@ dont-distribute-packages: - hadoop-tools - haggis - hails-bin - - hakyll-agda - - hakyll-alectryon - - hakyll-blaze-templates - - hakyll-contrib - - hakyll-contrib-csv - - hakyll-contrib-elm - - hakyll-contrib-hyphenation - - hakyll-contrib-i18n - - hakyll-contrib-links - - hakyll-dhall - - hakyll-dir-list - hakyll-elm - - hakyll-favicon - - hakyll-filestore - - hakyll-images - hakyll-ogmarkup - - hakyll-process - - hakyll-R - - hakyll-sass - - hakyll-series - - hakyll-shakespeare - - hakyll-shortcut-links - hakyll-typescript - halberd - hall-symbols @@ -1136,6 +1115,7 @@ dont-distribute-packages: - happstack-jmacro - happstack-plugins - happstack-state + - happstack-static-routing - happstack-yui - happs-tutorial - happybara-webkit @@ -1235,7 +1215,6 @@ dont-distribute-packages: - hasql-cursor-query - hasql-postgres - hasql-postgres-options - - hasql-queue - hasql-th - hastache-aeson - haste-app @@ -1283,7 +1262,6 @@ dont-distribute-packages: - hedgehog-gen-json - Hedi - hedis-pile - - heidi - heist-aeson - helics - helics-wai @@ -1351,10 +1329,10 @@ dont-distribute-packages: - HLearn-datastructures - HLearn-distributions - hledger-api + - hlrdb - hls - hly - hmark - - hmatrix-sundials - hmeap - hmeap-utils - hmep @@ -1589,7 +1567,6 @@ dont-distribute-packages: - invertible-hlist - ion - IORefCAS - - ip - ipatch - ipc - ipld-cid @@ -1599,7 +1576,6 @@ dont-distribute-packages: - irc-fun-client - irc-fun-color - irc-fun-messages - - iri - ironforge - isevaluated - ismtp @@ -1610,7 +1586,6 @@ dont-distribute-packages: - iteratee-parsec - iteratee-stm - iterio-server - - iterm-show-diagrams - iter-stats - ivor - ivory-avr-atmega328p-registers @@ -1652,11 +1627,9 @@ dont-distribute-packages: - JSON-Combinator-Examples - json-enumerator - JsonGrammar - - jsonifier - json-incremental-decoder - json-query - jsons-to-schema - - json-syntax - json-togo - json-tokens - jspath @@ -1680,7 +1653,6 @@ dont-distribute-packages: - karakuri - katip-elasticsearch - katip-rollbar - - kawaii - keera-hails-i18n - keera-hails-mvc-environment-gtk - keera-hails-mvc-model-lightmodel @@ -1912,12 +1884,10 @@ dont-distribute-packages: - markdown2svg - markdown-pap - markov-processes - - markup - marmalade-upload - marquise - marvin - masakazu-bot - - master-plan - matchers - mathblog - mathlink @@ -2000,6 +1970,7 @@ dont-distribute-packages: - Monocle - monte-carlo - moo + - moo-nad - morley - morloc - morphisms-functors-inventory @@ -2012,7 +1983,6 @@ dont-distribute-packages: - mpretty - mprover - mps - - mptcp-pm - msgpack-aeson - msgpack-idl - msgpack-rpc @@ -2171,7 +2141,6 @@ dont-distribute-packages: - pairing - panda - pandoc-japanese-filters - - pan-os-syslog - papa - papa-base - papa-base-implement @@ -2187,6 +2156,7 @@ dont-distribute-packages: - parquet-hs - parse-help - parsestar + - parsley-garnish - partial-lens - passman-cli - patch-image @@ -2220,7 +2190,6 @@ dont-distribute-packages: - peyotls - peyotls-codec - pgsql-simple - - pg-transact - phonetic-languages-examples - phonetic-languages-simplified-lists-examples - phooey @@ -2259,16 +2228,29 @@ dont-distribute-packages: - poke - polh-lexicon - polydata + - polysemy-chronos + - polysemy-conc - polysemy-extra + - polysemy-fs - polysemy-fskvstore + - polysemy-http - polysemy-kvstore-jsonfile + - polysemy-log - polysemy-log-co + - polysemy-log-di - polysemy-methodology - polysemy-methodology-composite + - polysemy-mocks - polysemy-optics - polysemy-path + - polysemy-plugin - polysemy-RandomFu + - polysemy-resume + - polysemy-test + - polysemy-time + - polysemy-video - polysemy-vinyl + - polysemy-webserver - polyseq - polytypeable-utils - pomodoro @@ -2344,7 +2326,6 @@ dont-distribute-packages: - push-notify-apn - push-notify-ccs - push-notify-general - - puzzle-draw - puzzle-draw-cmdline - pvd - qd-vec @@ -2417,18 +2398,10 @@ dont-distribute-packages: - rdioh - react-flux-servant - reactive - - reactive-balsa - - reactive-banana-automation - - reactive-banana-bunch - - reactive-banana-gi-gtk - reactive-banana-sdl - - reactive-banana-sdl2 - - reactive-banana-threepenny - reactive-banana-wx - reactive-fieldtrip - reactive-glut - - reactive-jack - - reactive-midyim - reactor - readline-statevar - readpyc @@ -2559,7 +2532,6 @@ dont-distribute-packages: - ruler-core - runtime-arbitrary - S3 - - safe-numeric - safer-file-handles - safer-file-handles-bytestring - safer-file-handles-text @@ -2598,7 +2570,6 @@ dont-distribute-packages: - scholdoc - scholdoc-citeproc - scholdoc-texmath - - scientific-notation - SciFlow - SciFlow-drmaa - scion @@ -2655,13 +2626,13 @@ dont-distribute-packages: - servant-streaming-docs - servant-streaming-server - servant-swagger-tags + - servant-util-beam-pg - servant-waargonaut - servant-zeppelin-client - servant-zeppelin-server - servant-zeppelin-swagger - serv-wai - sessiontypes-distributed - - setdown - s-expression - SFML-control - SFont @@ -2721,11 +2692,9 @@ dont-distribute-packages: - skylark-client - slidemews - slip32 - - small-bytearray-builder - smallstring - smartword - smcdel - - smith - smith-cli - smith-client - Smooth @@ -2856,6 +2825,7 @@ dont-distribute-packages: - structured-mongoDB - stunts - stutter + - stylist - subhask - substring-parser - summoner-tui @@ -2929,7 +2899,6 @@ dont-distribute-packages: - tensorflow-core-ops - tensorflow-logging - tensorflow-ops - - termbox-banana - terminal-text - terrahs - testbench @@ -3069,7 +3038,6 @@ dont-distribute-packages: - universe-th - unix-fcntl - unix-simple - - unpacked-maybe-numeric - unpacked-these - unpacked-validation - unparse-attoparsec @@ -3082,9 +3050,7 @@ dont-distribute-packages: - urembed - uri-enumerator - uri-enumerator-file - - url-bytes - UrlDisp - - urlpath - URLT - usb - usb-enumerator @@ -3097,7 +3063,6 @@ dont-distribute-packages: - uu-cco-examples - uu-cco-hut-parsing - uu-cco-uu-parsinglib - - uuid-bytes - uuid-crypto - uvector-algorithms - v4l2 @@ -3124,6 +3089,7 @@ dont-distribute-packages: - vfr-waypoints - ViennaRNA-extras - vigilance + - vimeta - vinyl-operational - vision - visual-graphrewrite @@ -3144,7 +3110,6 @@ dont-distribute-packages: - wai-middleware-cache - wai-middleware-cache-redis - wai-middleware-consul - - wai-middleware-content-type - wai-middleware-rollbar - wai-middleware-route - wai-session-tokyocabinet @@ -3178,7 +3143,6 @@ dont-distribute-packages: - wheb-redis - wheb-strapped - whitespace - - wide-word-instances - wikipedia4epub - windowslive - winio @@ -3197,7 +3161,6 @@ dont-distribute-packages: - wrecker-ui - wright - writer-cps-full - - ws - wss-client - wtk-gtk - wumpus-basic @@ -3248,6 +3211,7 @@ dont-distribute-packages: - yajl-enumerator - yam - yam-datasource + - yam-job - yam-logger - yaml-rpc-scotty - yaml-rpc-snap @@ -3255,6 +3219,7 @@ dont-distribute-packages: - yam-redis - yam-transaction - yam-transaction-odbc + - yam-transaction-postgresql - yam-web - yarr-image-io - yavie @@ -3267,7 +3232,6 @@ dont-distribute-packages: - yesod-colonnade - yesod-continuations - yesod-examples - - yesod-ip - yesod-mangopay - yesod-paypal-rest - yesod-platform diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-nix.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-nix.nix index a9f6263ab5..facd3ec5a3 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-nix.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/configuration-nix.nix @@ -53,7 +53,7 @@ self: super: builtins.intersectAttrs super { # Use the default version of mysql to build this package (which is actually mariadb). # test phase requires networking - mysql = dontCheck (super.mysql.override { mysql = pkgs.libmysqlclient; }); + mysql = dontCheck super.mysql; # CUDA needs help finding the SDK headers and libraries. cuda = overrideCabal super.cuda (drv: { @@ -243,7 +243,7 @@ self: super: builtins.intersectAttrs super { llvm-hs = super.llvm-hs.override { llvm-config = pkgs.llvm_9; }; # Needs help finding LLVM. - spaceprobe = addBuildTool super.spaceprobe self.llvmPackages.llvm; + spaceprobe = addBuildTool super.spaceprobe self.buildHaskellPackages.llvmPackages.llvm; # Tries to run GUI in tests leksah = dontCheck (overrideCabal super.leksah (drv: { @@ -336,7 +336,7 @@ self: super: builtins.intersectAttrs super { # https://github.com/deech/fltkhs/issues/16 fltkhs = overrideCabal super.fltkhs (drv: { - libraryToolDepends = (drv.libraryToolDepends or []) ++ [pkgs.autoconf]; + libraryToolDepends = (drv.libraryToolDepends or []) ++ [pkgs.buildPackages.autoconf]; librarySystemDepends = (drv.librarySystemDepends or []) ++ [pkgs.fltk13 pkgs.libGL pkgs.libjpeg]; }); @@ -495,8 +495,8 @@ self: super: builtins.intersectAttrs super { Frames-beam = dontCheck super.Frames-beam; # Compile manpages (which are in RST and are compiled with Sphinx). - futhark = with pkgs; - overrideCabal (addBuildTools super.futhark [makeWrapper python3Packages.sphinx]) + futhark = + overrideCabal (addBuildTools super.futhark (with pkgs.buildPackages; [makeWrapper python3Packages.sphinx])) (_drv: { postBuild = (_drv.postBuild or "") + '' make -C docs man @@ -511,7 +511,7 @@ self: super: builtins.intersectAttrs super { git-annex = with pkgs; if (!stdenv.isLinux) then let path = lib.makeBinPath [ coreutils ]; - in overrideCabal (addBuildTool super.git-annex makeWrapper) (_drv: { + in overrideCabal (addBuildTool super.git-annex buildPackages.makeWrapper) (_drv: { # This is an instance of https://github.com/NixOS/nix/pull/1085 # Fails with: # gpg: can't connect to the agent: File name too long @@ -577,7 +577,22 @@ self: super: builtins.intersectAttrs super { sha256 = "1hjdprm990vyxz86fgq14ajn0lkams7i00h8k2i2g1a0hjdwppq6"; }; - spagoDocs = overrideCabal super.spago (drv: { + spagoWithPatches = appendPatch super.spago ( + # Spago needs a small patch to work with versions-5.0.0: + # https://github.com/purescript/spago/pull/798 + # This can probably be removed with >spago-0.20.3. + pkgs.fetchpatch { + url = "https://github.com/purescript/spago/commit/dd4bf4413d9675c1c8065d24d0ed7b345c7fa5dd.patch"; + sha256 = "1i1r3f4n9mlkckx15bfrdy5m7gjf0zx7ycwyqra6qn34zpcbzpmf"; + } + ); + + spagoWithOverrides = spagoWithPatches.override { + # spago has not yet been updated for the latest dhall. + dhall = self.dhall_1_38_1; + }; + + spagoDocs = overrideCabal spagoWithOverrides (drv: { postUnpack = (drv.postUnpack or "") + '' # Spago includes the following two files directly into the binary # with Template Haskell. They are fetched at build-time from the @@ -616,7 +631,7 @@ self: super: builtins.intersectAttrs super { # mplayer-spot uses mplayer at runtime. mplayer-spot = let path = pkgs.lib.makeBinPath [ pkgs.mplayer ]; - in overrideCabal (addBuildTool super.mplayer-spot pkgs.makeWrapper) (oldAttrs: { + in overrideCabal (addBuildTool super.mplayer-spot pkgs.buildPackages.makeWrapper) (oldAttrs: { postInstall = '' wrapProgram $out/bin/mplayer-spot --prefix PATH : "${path}" ''; @@ -628,7 +643,7 @@ self: super: builtins.intersectAttrs super { cut-the-crap = let path = pkgs.lib.makeBinPath [ pkgs.ffmpeg pkgs.youtube-dl ]; - in overrideCabal (addBuildTool super.cut-the-crap pkgs.makeWrapper) (_drv: { + in overrideCabal (addBuildTool super.cut-the-crap pkgs.buildPackages.makeWrapper) (_drv: { postInstall = '' wrapProgram $out/bin/cut-the-crap \ --prefix PATH : "${path}" @@ -645,7 +660,7 @@ self: super: builtins.intersectAttrs super { neuron = overrideCabal (super.neuron) (drv: { # neuron expects the neuron-search script to be in PATH at built-time. - buildTools = [ pkgs.makeWrapper ]; + buildTools = [ pkgs.buildPackages.makeWrapper ]; preConfigure = '' mkdir -p $out/bin cp src-bash/neuron-search $out/bin/neuron-search @@ -785,6 +800,42 @@ self: super: builtins.intersectAttrs super { export HOME=$TMPDIR/home ''; }); + hls-ormolu-plugin = overrideCabal super.hls-ormolu-plugin (drv: { + testToolDepends = [ pkgs.git ]; + preCheck = '' + export HOME=$TMPDIR/home + ''; + }); + hls-fourmolu-plugin = overrideCabal super.hls-fourmolu-plugin (drv: { + testToolDepends = [ pkgs.git ]; + preCheck = '' + export HOME=$TMPDIR/home + ''; + }); + hls-module-name-plugin = overrideCabal super.hls-module-name-plugin (drv: { + testToolDepends = [ pkgs.git ]; + preCheck = '' + export HOME=$TMPDIR/home + ''; + }); + hls-splice-plugin = overrideCabal super.hls-splice-plugin (drv: { + testToolDepends = [ pkgs.git ]; + preCheck = '' + export HOME=$TMPDIR/home + ''; + }); + hls-floskell-plugin = overrideCabal super.hls-floskell-plugin (drv: { + testToolDepends = [ pkgs.git ]; + preCheck = '' + export HOME=$TMPDIR/home + ''; + }); + hls-pragmas-plugin = overrideCabal super.hls-pragmas-plugin (drv: { + testToolDepends = [ pkgs.git ]; + preCheck = '' + export HOME=$TMPDIR/home + ''; + }); # Tests have file permissions expections that don‘t work with the nix store. hls-stylish-haskell-plugin = dontCheck super.hls-stylish-haskell-plugin; hls-haddock-comments-plugin = overrideCabal super.hls-haddock-comments-plugin (drv: { @@ -794,6 +845,7 @@ self: super: builtins.intersectAttrs super { ''; }); hls-eval-plugin = overrideCabal super.hls-eval-plugin (drv: { + testToolDepends = [ pkgs.git ]; preCheck = '' export HOME=$TMPDIR/home ''; @@ -819,4 +871,47 @@ self: super: builtins.intersectAttrs super { # itself causing an infinite recursion at evaluation # time random = dontCheck super.random; + + # Since this package is primarily used by nixpkgs maintainers and is probably + # not used to link against by anyone, we can make it’s closure smaller and + # add its runtime dependencies in `haskellPackages` (as opposed to cabal2nix). + cabal2nix-unstable = overrideCabal + (justStaticExecutables super.cabal2nix-unstable) + (drv: { + buildTools = (drv.buildTools or []) ++ [ + pkgs.buildPackages.makeWrapper + ]; + postInstall = '' + wrapProgram $out/bin/cabal2nix \ + --prefix PATH ":" "${ + pkgs.lib.makeBinPath [ pkgs.nix pkgs.nix-prefetch-scripts ] + }" + ''; + }); + + # test suite needs local redis daemon + nri-redis = dontCheck super.nri-redis; + + # Make tophat find itself for _compiling_ its test suite + tophat = overrideCabal super.tophat (drv: { + postPatch = '' + sed -i 's|"tophat"|"./dist/build/tophat/tophat"|' app-test-bin/*.hs + '' + (drv.postPatch or ""); + }); + + # Runtime dependencies and CLI completion + nvfetcher = generateOptparseApplicativeCompletion "nvfetcher" (overrideCabal + super.nvfetcher (drv: { + buildTools = drv.buildTools or [ ] ++ [ pkgs.buildPackages.makeWrapper ]; + postInstall = drv.postInstall or "" + '' + wrapProgram "$out/bin/nvfetcher" --prefix 'PATH' ':' "${ + pkgs.lib.makeBinPath [ pkgs.nvchecker pkgs.nix-prefetch-git ] + }" + ''; + })); + + rel8 = addTestToolDepend super.rel8 pkgs.postgresql; + + cachix = generateOptparseApplicativeCompletion "cachix" super.cachix; + } diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/generic-builder.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/generic-builder.nix index a9c8f11223..2b2f23e20e 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/generic-builder.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/generic-builder.nix @@ -58,7 +58,7 @@ in , pkg-configDepends ? [], libraryPkgconfigDepends ? [], executablePkgconfigDepends ? [], testPkgconfigDepends ? [], benchmarkPkgconfigDepends ? [] , testDepends ? [], testHaskellDepends ? [], testSystemDepends ? [], testFrameworkDepends ? [] , benchmarkDepends ? [], benchmarkHaskellDepends ? [], benchmarkSystemDepends ? [], benchmarkFrameworkDepends ? [] -, testTarget ? "" +, testTarget ? "", testFlags ? [] , broken ? false , preCompileBuildDriver ? null, postCompileBuildDriver ? null , preUnpack ? null, postUnpack ? null @@ -454,9 +454,13 @@ stdenv.mkDerivation ({ inherit doCheck; + # Run test suite(s) and pass `checkFlags` as well as `checkFlagsArray`. + # `testFlags` are added to `checkFlagsArray` each prefixed with + # `--test-option`, so Cabal passes it to the underlying test suite binary. checkPhase = '' runHook preCheck - ${setupCommand} test ${testTarget} + checkFlagsArray+=(${lib.escapeShellArgs (builtins.map (opt: "--test-option=${opt}") testFlags)}) + ${setupCommand} test ${testTarget} $checkFlags ''${checkFlagsArray:+"''${checkFlagsArray[@]}"} runHook postCheck ''; @@ -481,7 +485,7 @@ stdenv.mkDerivation ({ # ^^ if the project is not a library, and we have a build target, then use "copy" to install # just the target specified; "install" will error here, since not all targets have been built. else '' - ${setupCommand} copy + ${setupCommand} copy ${buildTarget} local packageConfDir="$out/lib/${ghc.name}/package.conf.d" local packageConfFile="$packageConfDir/${pname}-${version}.conf" mkdir -p "$packageConfDir" diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/hackage-packages.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/hackage-packages.nix index 9ec6640f3d..87864a11e5 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/hackage-packages.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/hackage-packages.nix @@ -816,6 +816,42 @@ self: { maintainers = with lib.maintainers; [ abbradar turion ]; }) {inherit (pkgs) emacs;}; + "Agda_2_6_2" = callPackage + ({ mkDerivation, aeson, alex, array, async, base, binary + , blaze-html, boxes, bytestring, Cabal, case-insensitive + , containers, data-hash, deepseq, directory, edit-distance, emacs + , equivalence, exceptions, filepath, ghc-compact, gitrev, happy + , hashable, hashtables, haskeline, monad-control, mtl, murmur-hash + , parallel, pretty, process, regex-tdfa, split, stm, strict + , template-haskell, text, time, transformers, unordered-containers + , uri-encode, zlib + }: + mkDerivation { + pname = "Agda"; + version = "2.6.2"; + sha256 = "159hznnsxg7hlp80r1wqizyd7gwgnq0j13cm4d27cns0ganslb07"; + isLibrary = true; + isExecutable = true; + enableSeparateDataOutput = true; + setupHaskellDepends = [ base Cabal directory filepath process ]; + libraryHaskellDepends = [ + aeson array async base binary blaze-html boxes bytestring + case-insensitive containers data-hash deepseq directory + edit-distance equivalence exceptions filepath ghc-compact gitrev + hashable hashtables haskeline monad-control mtl murmur-hash + parallel pretty process regex-tdfa split stm strict + template-haskell text time transformers unordered-containers + uri-encode zlib + ]; + libraryToolDepends = [ alex happy ]; + executableHaskellDepends = [ base directory filepath process ]; + executableToolDepends = [ emacs ]; + description = "A dependently typed functional programming language and proof assistant"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + maintainers = with lib.maintainers; [ abbradar turion ]; + }) {inherit (pkgs) emacs;}; + "Agda-executable" = callPackage ({ mkDerivation, Agda, base }: mkDerivation { @@ -1267,8 +1303,8 @@ self: { }: mkDerivation { pname = "BNFC"; - version = "2.9.1"; - sha256 = "0670in07lr9fgkx0c7zci8rn8c7g8nimkmpzy5w9swfp4rp3gbkk"; + version = "2.9.2"; + sha256 = "1wn46a6rw6fwxmqp3b8nz81ag2nphyalm6l2frzg63xbdxnlwgmi"; isLibrary = true; isExecutable = true; setupHaskellDepends = [ base Cabal cabal-doctest ]; @@ -1551,8 +1587,8 @@ self: { }: mkDerivation { pname = "BiobaseBlast"; - version = "0.3.1.0"; - sha256 = "153bxf221jga58ibxgd660465klbqj49qr3rk6ni77v7sb4qgrg0"; + version = "0.3.3.0"; + sha256 = "11xxm3s6pyy68as6pd3iwfq2dmbgvj2w238jg969fza8vj22xcdb"; libraryHaskellDepends = [ aeson attoparsec base binary BiobaseENA BiobaseTypes BiobaseXNA bytestring cereal containers deepseq directory file-embed lens @@ -1587,8 +1623,8 @@ self: { }: mkDerivation { pname = "BiobaseENA"; - version = "0.0.0.1"; - sha256 = "0wkfaxrv4s34amjjl02q0si5nvs18f74z9dxp5r024fd42g3fdka"; + version = "0.0.0.2"; + sha256 = "0v999rs3bj4mkbrxsgz0nnqh1pzf7pgxm94519hqjfph5r6yw7nd"; libraryHaskellDepends = [ base BiobaseTypes bytestring containers directory file-embed lens megaparsec mtl text vector vector-th-unbox @@ -1639,18 +1675,24 @@ self: { "BiobaseFasta" = callPackage ({ mkDerivation, base, BiobaseTypes, bytestring, DPutils, filepath - , lens, QuickCheck, resourcet, streaming, streaming-bytestring - , string-conversions, tasty, tasty-golden, tasty-hunit - , tasty-quickcheck, tasty-silver, tasty-th, text + , lens, optparse-applicative, QuickCheck, resourcet, streaming + , streaming-bytestring, string-conversions, tasty, tasty-golden + , tasty-hunit, tasty-quickcheck, tasty-silver, tasty-th, text }: mkDerivation { pname = "BiobaseFasta"; - version = "0.3.0.1"; - sha256 = "11vwvqln5jv4k97miyjgqs3yckm8fhyclclhfxq473i4g22amjyh"; + version = "0.4.0.1"; + sha256 = "1l5185nsq59jgnpx1r0j5r07a5fqz8f5q2xyxvhwbqan51w51ph6"; + isLibrary = true; + isExecutable = true; libraryHaskellDepends = [ base BiobaseTypes bytestring DPutils lens resourcet streaming streaming-bytestring string-conversions ]; + executableHaskellDepends = [ + base BiobaseTypes bytestring DPutils lens optparse-applicative + resourcet streaming streaming-bytestring string-conversions + ]; testHaskellDepends = [ base BiobaseTypes bytestring DPutils filepath lens QuickCheck resourcet streaming streaming-bytestring string-conversions tasty @@ -1822,30 +1864,31 @@ self: { "BiobaseTypes" = callPackage ({ mkDerivation, aeson, attoparsec, base, bimaps, binary , bytestring, cereal, cereal-text, cereal-vector, containers - , data-default, deepseq, ForestStructures, hashable, intern, lens - , mtl, primitive, PrimitiveArray, QuickCheck, SciBaseTypes - , streaming, string-conversions, tasty, tasty-quickcheck, tasty-th - , text, text-binary, utf8-string, vector, vector-binary-instances - , vector-th-unbox + , data-default, deepseq, DPutils, ForestStructures, hashable + , intern, lens, mtl, primitive, PrimitiveArray, QuickCheck + , SciBaseTypes, streaming, string-conversions, tasty, tasty-hunit + , tasty-quickcheck, tasty-th, text, text-binary, utf8-string + , vector, vector-binary-instances, vector-th-unbox }: mkDerivation { pname = "BiobaseTypes"; - version = "0.2.0.1"; - sha256 = "1ygyq169dcz1bswppljkskvqamvvs61n8fwyyplyf4348i1v938i"; + version = "0.2.1.0"; + sha256 = "0gm5nlh8xbww614386vhm2lz118w9c6lcj3pbx5k256mzm7j5yba"; libraryHaskellDepends = [ aeson attoparsec base bimaps binary bytestring cereal cereal-text - cereal-vector containers data-default deepseq ForestStructures - hashable intern lens mtl primitive PrimitiveArray QuickCheck - SciBaseTypes streaming string-conversions text text-binary - utf8-string vector vector-binary-instances vector-th-unbox + cereal-vector containers data-default deepseq DPutils + ForestStructures hashable intern lens mtl primitive PrimitiveArray + QuickCheck SciBaseTypes streaming string-conversions text + text-binary utf8-string vector vector-binary-instances + vector-th-unbox ]; testHaskellDepends = [ aeson attoparsec base bimaps binary bytestring cereal cereal-text - cereal-vector containers data-default deepseq ForestStructures - hashable intern lens mtl primitive PrimitiveArray QuickCheck - SciBaseTypes streaming string-conversions tasty tasty-quickcheck - tasty-th text text-binary utf8-string vector - vector-binary-instances vector-th-unbox + cereal-vector containers data-default deepseq DPutils + ForestStructures hashable intern lens mtl primitive PrimitiveArray + QuickCheck SciBaseTypes streaming string-conversions tasty + tasty-hunit tasty-quickcheck tasty-th text text-binary utf8-string + vector vector-binary-instances vector-th-unbox ]; description = "Collection of types for bioinformatics"; license = lib.licenses.bsd3; @@ -1872,36 +1915,36 @@ self: { ({ mkDerivation, aeson, attoparsec, base, bimaps, binary , BiobaseENA, BiobaseTypes, bytes, bytestring, cereal , cereal-vector, cmdargs, containers, csv, data-default, deepseq - , file-embed, ForestStructures, hashable, lens, mtl, primitive - , PrimitiveArray, QuickCheck, split, tasty, tasty-quickcheck - , tasty-th, text, tuple, vector, vector-binary-instances - , vector-th-unbox + , DPutils, file-embed, ForestStructures, hashable, lens, mtl + , primitive, PrimitiveArray, QuickCheck, split, tasty + , tasty-quickcheck, tasty-th, text, tuple, vector + , vector-binary-instances, vector-th-unbox }: mkDerivation { pname = "BiobaseXNA"; - version = "0.11.0.0"; - sha256 = "1yrq14mv5bbw6drlpk2cf6incdg2wqw3i0zgdd0vpfmxbwr3wjl4"; + version = "0.11.1.1"; + sha256 = "0ws9x3z5ljgm7hnz290yhzm3ijksd6dr4m0drj1lxhchdfmwfy1m"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; libraryHaskellDepends = [ aeson attoparsec base bimaps binary BiobaseENA BiobaseTypes bytes bytestring cereal cereal-vector containers csv data-default deepseq - file-embed ForestStructures hashable lens mtl primitive + DPutils file-embed ForestStructures hashable lens mtl primitive PrimitiveArray QuickCheck split text tuple vector vector-binary-instances vector-th-unbox ]; executableHaskellDepends = [ aeson attoparsec base bimaps binary BiobaseENA BiobaseTypes bytes bytestring cereal cereal-vector cmdargs containers csv data-default - deepseq file-embed ForestStructures hashable lens mtl primitive - PrimitiveArray QuickCheck split text tuple vector + deepseq DPutils file-embed ForestStructures hashable lens mtl + primitive PrimitiveArray QuickCheck split text tuple vector vector-binary-instances vector-th-unbox ]; testHaskellDepends = [ aeson attoparsec base bimaps binary BiobaseENA BiobaseTypes bytes bytestring cereal cereal-vector containers csv data-default deepseq - file-embed ForestStructures hashable lens mtl primitive + DPutils file-embed ForestStructures hashable lens mtl primitive PrimitiveArray QuickCheck split tasty tasty-quickcheck tasty-th text tuple vector vector-binary-instances vector-th-unbox ]; @@ -1977,8 +2020,8 @@ self: { }: mkDerivation { pname = "BlastHTTP"; - version = "1.4.1"; - sha256 = "1h7bj9a6qfzwlclr39dvbcz4r8l8s7n53z6ir8wff5ssq2wvq4qd"; + version = "1.4.2"; + sha256 = "1ndg24w4qcs7f6ak8qcgfp04mippz2vxpcxwpnsaghyxvpbxqbw6"; libraryHaskellDepends = [ base BiobaseBlast BiobaseFasta bytestring conduit either-unwrap HTTP http-conduit hxt mtl network transformers zip-archive @@ -3315,8 +3358,8 @@ self: { }: mkDerivation { pname = "Color"; - version = "0.3.1"; - sha256 = "1gg15kb6za69w0b3x8pzrqbrh9b8g7g0zwj2a9ajf0wgp8kylp5b"; + version = "0.3.2"; + sha256 = "1v5x32jas70sfqy90brjqlfsy816ar9mcbr3i1lviqivzq7agshk"; libraryHaskellDepends = [ base data-default-class deepseq vector ]; testHaskellDepends = [ base colour doctest hspec HUnit JuicyPixels massiv massiv-test @@ -3898,26 +3941,26 @@ self: { "DBFunctor" = callPackage ({ mkDerivation, base, bytestring, cassava, cereal, containers - , deepseq, either, MissingH, text, time, transformers - , unordered-containers, vector + , deepseq, either, text, time, transformers, unordered-containers + , vector }: mkDerivation { pname = "DBFunctor"; - version = "0.1.1.1"; - sha256 = "0n3qmgjf9ly5vpnsvh8rhwbd94l157d1asy95n8yqpmrb6xqc1k4"; + version = "0.1.2.1"; + sha256 = "0ikb4s9g1mrp4pdz1119dq1vci7mfcvcw92xs47rcin26a3ysdcz"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - base bytestring cassava cereal containers deepseq either MissingH - text time transformers unordered-containers vector + base bytestring cassava cereal containers deepseq either text time + transformers unordered-containers vector ]; executableHaskellDepends = [ - base bytestring cassava cereal containers deepseq either MissingH - text time transformers unordered-containers vector + base bytestring cassava cereal containers deepseq either text time + transformers unordered-containers vector ]; testHaskellDepends = [ - base bytestring cassava cereal containers deepseq either MissingH - text time transformers unordered-containers vector + base bytestring cassava cereal containers deepseq either text time + transformers unordered-containers vector ]; description = "DBFunctor - Functional Data Management => ETL/ELT Data Processing in Haskell"; license = lib.licenses.bsd3; @@ -4066,28 +4109,25 @@ self: { }: mkDerivation { pname = "DPutils"; - version = "0.1.0.0"; - sha256 = "153g1rr13jjwqkvfj85nwjhaa0zq8khn24n3dib80nyk0scd4w62"; + version = "0.1.1.0"; + sha256 = "1kvj6zkj8r7qp1zvqz68fflxcal3w4qi1y8a70bm6qq5d83ivnd4"; libraryHaskellDepends = [ - attoparsec base bytestring containers criterion kan-extensions lens - mtl parallel pipes pipes-bytestring pipes-parse primitive - QuickCheck smallcheck streaming streaming-bytestring stringsearch - tasty tasty-quickcheck tasty-smallcheck tasty-th transformers + attoparsec base bytestring containers kan-extensions lens mtl + parallel pipes pipes-bytestring pipes-parse primitive QuickCheck + smallcheck streaming streaming-bytestring stringsearch transformers vector ]; testHaskellDepends = [ - attoparsec base bytestring containers criterion kan-extensions lens - mtl parallel pipes pipes-bytestring pipes-parse primitive - QuickCheck smallcheck streaming streaming-bytestring stringsearch - tasty tasty-quickcheck tasty-smallcheck tasty-th transformers - vector + attoparsec base bytestring containers kan-extensions lens mtl + parallel pipes pipes-bytestring pipes-parse primitive QuickCheck + smallcheck streaming streaming-bytestring stringsearch tasty + tasty-quickcheck tasty-smallcheck tasty-th transformers vector ]; benchmarkHaskellDepends = [ attoparsec base bytestring containers criterion kan-extensions lens mtl parallel pipes pipes-bytestring pipes-parse primitive QuickCheck smallcheck streaming streaming-bytestring stringsearch - tasty tasty-quickcheck tasty-smallcheck tasty-th timeit - transformers vector + timeit transformers vector ]; description = "utilities for DP"; license = lib.licenses.bsd3; @@ -6347,8 +6387,8 @@ self: { }: mkDerivation { pname = "Frames"; - version = "0.7.1"; - sha256 = "10js8xhp1v6gk6aagrzkn5c2c2gg4xml9vavpvhjfvj2jz77rfkm"; + version = "0.7.2"; + sha256 = "08q3zfhb6wf4b8020d63v6zpmb3834ba50hnb478vvjqd8rrp1mh"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -8774,6 +8814,31 @@ self: { license = lib.licenses.bsd3; }) {}; + "HMock" = callPackage + ({ mkDerivation, base, constraints, containers, data-default + , deepseq, directory, doctest-exitcode-stdio, doctest-lib + , exceptions, extra, hspec, monad-control, mono-traversable, mtl + , QuickCheck, regex-tdfa, syb, template-haskell, transformers-base + , unliftio + }: + mkDerivation { + pname = "HMock"; + version = "0.1.0.1"; + sha256 = "1viv8aggapxvk1akm1z3976h4b12wa8zwkr5qinfpvmsgvlkhhlz"; + libraryHaskellDepends = [ + base constraints containers data-default exceptions extra + monad-control mono-traversable mtl regex-tdfa syb template-haskell + transformers-base unliftio + ]; + testHaskellDepends = [ + base containers data-default deepseq directory + doctest-exitcode-stdio doctest-lib exceptions extra hspec mtl + QuickCheck syb template-haskell unliftio + ]; + description = "A flexible mock framework for testing effectful code"; + license = lib.licenses.bsd3; + }) {}; + "HNM" = callPackage ({ mkDerivation, base, containers, directory, glib, gtk, haskell98 , mtl, process, regex-posix, unix @@ -10028,15 +10093,16 @@ self: { "HaskellNet-SSL" = callPackage ({ mkDerivation, base, bytestring, connection, data-default - , HaskellNet, network, tls + , HaskellNet, network, network-bsd }: mkDerivation { pname = "HaskellNet-SSL"; - version = "0.3.4.1"; - sha256 = "0j36zcx5vfg4jzc7vvfj4ifcvcgyy2sn9rxnxj3vg2cw77idqyp1"; + version = "0.3.4.4"; + sha256 = "031d1a8ryzkm3xsyh1gh8d8kxq9i7pc9r5l2vjpkzgba31s5fbia"; enableSeparateDataOutput = true; libraryHaskellDepends = [ - base bytestring connection data-default HaskellNet network tls + base bytestring connection data-default HaskellNet network + network-bsd ]; description = "Helpers to connect to SSL/TLS mail servers with HaskellNet"; license = lib.licenses.bsd3; @@ -11650,8 +11716,8 @@ self: { }: mkDerivation { pname = "JuicyPixels-extra"; - version = "0.5.0"; - sha256 = "1r6rpasakl4s7x53y6wz34rkg4xxjhh8zfm9aqdjnxc7b8ir0nbb"; + version = "0.5.1"; + sha256 = "1kgb2l6ymhjr7wq93jpdhxy3k4i7jz0rz256phz10ycdpyvdbjpq"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base JuicyPixels ]; testHaskellDepends = [ base hspec JuicyPixels ]; @@ -13060,8 +13126,8 @@ self: { }: mkDerivation { pname = "MagicHaskeller"; - version = "0.9.6.8"; - sha256 = "1091s8jrynjb76wg5r53kp0siv0dgbsxsb9y2djrq1iz06h01m55"; + version = "0.9.6.10"; + sha256 = "04rfddv8hldjavks7pn3s9p80cgpzlz3x9f9d7y6wyz98zcqxpbf"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -13419,6 +13485,8 @@ self: { pname = "MissingH"; version = "1.4.3.0"; sha256 = "196cniya5wzcv2d777nr0f7hinclpals4ia1mkzzv35870pqr6lw"; + revision = "1"; + editedCabalFile = "0f8x0vpwcbcvy3b421pahx1ff6l3lfaqvvfkyks1vllcr4p8ky9j"; libraryHaskellDepends = [ array base containers directory filepath hslogger mtl network network-bsd old-locale old-time parsec process random regex-compat @@ -14097,6 +14165,24 @@ self: { license = lib.licenses.gpl3Only; }) {}; + "NanoID" = callPackage + ({ mkDerivation, base, bytestring, extra, mwc-random + , optparse-applicative + }: + mkDerivation { + pname = "NanoID"; + version = "2.1.0"; + sha256 = "0ila2yrdva18y20wm533hkqmmb2mrh1j212jp2ck6p6yiwam687j"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base bytestring extra mwc-random ]; + executableHaskellDepends = [ + base bytestring mwc-random optparse-applicative + ]; + description = "NanoID generator"; + license = lib.licenses.bsd3; + }) {}; + "NanoProlog" = callPackage ({ mkDerivation, base, containers, ListLike, uu-parsinglib }: mkDerivation { @@ -15872,7 +15958,7 @@ self: { }) {}; "PortMidi" = callPackage - ({ mkDerivation, alsaLib, base }: + ({ mkDerivation, alsa-lib, base }: mkDerivation { pname = "PortMidi"; version = "0.2.0.0"; @@ -15880,24 +15966,23 @@ self: { revision = "1"; editedCabalFile = "0h3gql271mdz3kh0jgimxv8ada34b0h4n8wnyf5i759fqxpf6w86"; libraryHaskellDepends = [ base ]; - librarySystemDepends = [ alsaLib ]; + librarySystemDepends = [ alsa-lib ]; description = "A binding for PortMedia/PortMidi"; license = lib.licenses.bsd3; platforms = [ "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" ]; - }) {inherit (pkgs) alsaLib;}; + }) {inherit (pkgs) alsa-lib;}; "PortMidi-simple" = callPackage ({ mkDerivation, base, PortMidi }: mkDerivation { pname = "PortMidi-simple"; - version = "0.1.0.0"; - sha256 = "17bl26jlpd48ag42kbjdirqhpahxaiax5sy7p3j1jylhiargijcd"; + version = "0.1.0.1"; + sha256 = "1xi0117296jxc15vpjxd228p31hb5bm47wakiinlp1rdvvil63lc"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base PortMidi ]; - executableHaskellDepends = [ base PortMidi ]; description = "Simplified PortMidi wrapper"; license = lib.licenses.bsd3; platforms = [ @@ -15934,32 +16019,34 @@ self: { "PrimitiveArray" = callPackage ({ mkDerivation, aeson, base, binary, bits, cereal, cereal-vector - , containers, criterion, deepseq, DPutils, hashable, lens - , log-domain, mtl, OrderedBits, primitive, QuickCheck, smallcheck - , tasty, tasty-quickcheck, tasty-smallcheck, tasty-th, text, vector + , containers, criterion, deepseq, DPutils, hashable, hashtables + , lens, log-domain, mtl, OrderedBits, primitive, QuickCheck + , smallcheck, tasty, tasty-quickcheck, tasty-smallcheck, tasty-th + , text, unordered-containers, vector, vector-algorithms , vector-binary-instances, vector-th-unbox }: mkDerivation { pname = "PrimitiveArray"; - version = "0.10.0.0"; - sha256 = "0g9shj3zqk8rdp905di9i5g5bhga5msc7cs609fk3nkjm16ms0vi"; + version = "0.10.1.1"; + sha256 = "114d41g28i8iah5gpb1377rzfmbcsfay9gr9dhhyyj4dqrpdn1df"; libraryHaskellDepends = [ aeson base binary bits cereal cereal-vector containers deepseq - DPutils hashable lens log-domain mtl OrderedBits primitive - QuickCheck smallcheck text vector vector-binary-instances - vector-th-unbox + DPutils hashable hashtables lens log-domain mtl OrderedBits + primitive QuickCheck smallcheck text unordered-containers vector + vector-algorithms vector-binary-instances vector-th-unbox ]; testHaskellDepends = [ aeson base binary bits cereal cereal-vector containers deepseq - DPutils hashable lens log-domain mtl OrderedBits primitive - QuickCheck smallcheck tasty tasty-quickcheck tasty-smallcheck - tasty-th text vector vector-binary-instances vector-th-unbox + DPutils hashable hashtables lens log-domain mtl OrderedBits + primitive QuickCheck smallcheck tasty tasty-quickcheck + tasty-smallcheck tasty-th text unordered-containers vector + vector-algorithms vector-binary-instances vector-th-unbox ]; benchmarkHaskellDepends = [ aeson base binary bits cereal cereal-vector containers criterion - deepseq DPutils hashable lens log-domain mtl OrderedBits primitive - QuickCheck smallcheck text vector vector-binary-instances - vector-th-unbox + deepseq DPutils hashable hashtables lens log-domain mtl OrderedBits + primitive QuickCheck smallcheck text unordered-containers vector + vector-algorithms vector-binary-instances vector-th-unbox ]; description = "Efficient multidimensional arrays"; license = lib.licenses.bsd3; @@ -16029,8 +16116,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "Probnet"; - version = "0.1.0.2"; - sha256 = "1jk1y51rda8j4lan2az906fwb5hgqb8s50p0xrhchnf654scm851"; + version = "0.1.0.4"; + sha256 = "02q4c7mp268r8f3p2f37yksssginjrs89ldqljpn80aj53ylcqyf"; libraryHaskellDepends = [ base ]; description = "Geometric Extrapolation of Integer Sequences with error prediction"; license = lib.licenses.mit; @@ -16877,8 +16964,8 @@ self: { }: mkDerivation { pname = "Rasterific"; - version = "0.7.5.3"; - sha256 = "164ivzwrla90baqz6gapmcmi1yg5bk0sczqv4xawx3l7dzkz8ghv"; + version = "0.7.5.4"; + sha256 = "07silf2b85kxq7wvl5mnwrg5p0gwzlapipj9hi224i9ix1knn5f1"; libraryHaskellDepends = [ base bytestring containers dlist FontyFruity free JuicyPixels mtl primitive transformers vector vector-algorithms @@ -17148,7 +17235,7 @@ self: { }) {}; "RtMidi" = callPackage - ({ mkDerivation, alsaLib, base, deepseq, pretty-simple, tasty + ({ mkDerivation, alsa-lib, base, deepseq, pretty-simple, tasty , tasty-hunit, unliftio-core, vector }: mkDerivation { @@ -17158,14 +17245,14 @@ self: { isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base deepseq unliftio-core vector ]; - librarySystemDepends = [ alsaLib ]; + librarySystemDepends = [ alsa-lib ]; executableHaskellDepends = [ base pretty-simple vector ]; testHaskellDepends = [ base tasty tasty-hunit vector ]; description = "Haskell wrapper for RtMidi, the lightweight, cross-platform MIDI I/O library"; license = lib.licenses.mit; hydraPlatforms = lib.platforms.none; broken = true; - }) {inherit (pkgs) alsaLib;}; + }) {inherit (pkgs) alsa-lib;}; "RxHaskell" = callPackage ({ mkDerivation, base, containers, stm, transformers }: @@ -17806,28 +17893,26 @@ self: { }) {}; "SciBaseTypes" = callPackage - ({ mkDerivation, aeson, base, binary, cereal, deepseq, hashable - , lens, log-domain, mtl, QuickCheck, semirings, tasty + ({ mkDerivation, aeson, base, binary, cereal, deepseq, DPutils + , hashable, lens, log-domain, mtl, QuickCheck, semirings, tasty , tasty-quickcheck, tasty-th, vector, vector-th-unbox }: mkDerivation { pname = "SciBaseTypes"; - version = "0.1.0.0"; - sha256 = "1c0cgzxhamgswn1zhrarbx5vrmzl160nk8dadzi6mphwd2rv6lfr"; - revision = "1"; - editedCabalFile = "025v2s4097mzqyf5bzzz2xnxcc4nckcvaz72pnrxs3d8bbszd26i"; + version = "0.1.1.0"; + sha256 = "12k2arn3qbgfa8bc344vv02smqj3yd6rqhnpfib3yi43nkbaazqa"; libraryHaskellDepends = [ - aeson base binary cereal deepseq hashable lens log-domain mtl - semirings vector vector-th-unbox + aeson base binary cereal deepseq DPutils hashable lens log-domain + mtl semirings vector vector-th-unbox ]; testHaskellDepends = [ - aeson base binary cereal deepseq hashable lens log-domain mtl - QuickCheck semirings tasty tasty-quickcheck tasty-th vector + aeson base binary cereal deepseq DPutils hashable lens log-domain + mtl QuickCheck semirings tasty tasty-quickcheck tasty-th vector vector-th-unbox ]; benchmarkHaskellDepends = [ - aeson base binary cereal deepseq hashable lens log-domain mtl - semirings vector vector-th-unbox + aeson base binary cereal deepseq DPutils hashable lens log-domain + mtl semirings vector vector-th-unbox ]; description = "Base types and classes for statistics, sciences and humanities"; license = lib.licenses.bsd3; @@ -18204,16 +18289,16 @@ self: { }) {}; "Shpadoinkle" = callPackage - ({ mkDerivation, base, category, containers, ghcjs-dom, jsaddle - , jsaddle-warp, text, transformers, unliftio, wai, wai-app-static - , warp + ({ mkDerivation, base, containers, deepseq, ghcjs-dom, jsaddle + , jsaddle-warp, mtl, text, transformers, unliftio, wai + , wai-app-static, warp }: mkDerivation { pname = "Shpadoinkle"; - version = "0.3.0.0"; - sha256 = "083ly6xpdcf7wgrb3shcw26zk0d8rm8issyvki1rwvd29rwj0k41"; + version = "0.3.2.0"; + sha256 = "1an13ybgayp532vx040bhjccg3kb429zrcrhc38bkvbs6475y3bz"; libraryHaskellDepends = [ - base category containers ghcjs-dom jsaddle jsaddle-warp text + base containers deepseq ghcjs-dom jsaddle jsaddle-warp mtl text transformers unliftio wai wai-app-static warp ]; description = "A programming model for declarative, high performance user interface"; @@ -18222,17 +18307,17 @@ self: { "Shpadoinkle-backend-pardiff" = callPackage ({ mkDerivation, base, compactable, containers, exceptions - , file-embed, ghcjs-dom, jsaddle, lens, monad-control, mtl, random - , semialign, Shpadoinkle, text, these, transformers-base, unliftio + , file-embed, ghcjs-dom, jsaddle, monad-control, mtl, random + , Shpadoinkle, text, transformers-base, unliftio }: mkDerivation { pname = "Shpadoinkle-backend-pardiff"; - version = "0.3.0.0"; - sha256 = "1m12m4qbivh0srdzwzcqr8s6s1hi1blk3x15ljv5c9viriznfy6z"; + version = "0.3.0.1"; + sha256 = "1ghj2464pq36paf3z56hc7q0p2nkfgwqjvfa3yymwfr2xdachqwd"; libraryHaskellDepends = [ base compactable containers exceptions file-embed ghcjs-dom jsaddle - lens monad-control mtl random semialign Shpadoinkle text these - transformers-base unliftio + monad-control mtl random Shpadoinkle text transformers-base + unliftio ]; description = "A Virtual Dom in pure Haskell, based on Html as an Alignable Functor"; license = lib.licenses.bsd3; @@ -18240,17 +18325,17 @@ self: { }) {}; "Shpadoinkle-backend-snabbdom" = callPackage - ({ mkDerivation, base, exceptions, file-embed, ghcjs-dom, jsaddle - , monad-control, mtl, Shpadoinkle, text, transformers-base - , unliftio + ({ mkDerivation, base, containers, exceptions, file-embed + , ghcjs-dom, jsaddle, monad-control, mtl, Shpadoinkle, text + , transformers-base, unliftio }: mkDerivation { pname = "Shpadoinkle-backend-snabbdom"; - version = "0.3.0.1"; - sha256 = "0452znn1q558n1dy52j493y7f9lml57cnqbmdmqv28zq12sxpypm"; + version = "0.3.0.2"; + sha256 = "1hqbfsjlvrkfjf16r5f1jr7fxbki559mbxksqviba80b94wn34ld"; libraryHaskellDepends = [ - base exceptions file-embed ghcjs-dom jsaddle monad-control mtl - Shpadoinkle text transformers-base unliftio + base containers exceptions file-embed ghcjs-dom jsaddle + monad-control mtl Shpadoinkle text transformers-base unliftio ]; description = "Use the high-performance Snabbdom virtual dom library written in JavaScript"; license = lib.licenses.bsd3; @@ -18262,8 +18347,8 @@ self: { ({ mkDerivation, base, compactable, Shpadoinkle, text }: mkDerivation { pname = "Shpadoinkle-backend-static"; - version = "0.2.0.0"; - sha256 = "0kxfsm4g6mwwcrpq8bm83v32jpp97bsvl6ay0ynnmss0yf70ymmi"; + version = "0.2.0.1"; + sha256 = "1lcly4kb6im7m1y25209s7wxdvisc0nyfa33a3fjf078ambqpai1"; libraryHaskellDepends = [ base compactable Shpadoinkle text ]; description = "A backend for rendering Shpadoinkle as Text"; license = lib.licenses.bsd3; @@ -18274,8 +18359,8 @@ self: { ({ mkDerivation, aeson, base, jsaddle, lens, text, unliftio }: mkDerivation { pname = "Shpadoinkle-console"; - version = "0.0.1.3"; - sha256 = "0zkiv0h37a3x3569xfvfzdy0dywxhcfx12jddqf9bpfyqsxmf42a"; + version = "0.0.1.4"; + sha256 = "1agvyr8785y9dmhdcm36mhvg3lq2ksqly38asb7pb8xynhlvllbk"; libraryHaskellDepends = [ aeson base jsaddle lens text unliftio ]; description = "Support for the native browser console"; license = lib.licenses.bsd3; @@ -18299,8 +18384,8 @@ self: { }: mkDerivation { pname = "Shpadoinkle-developer-tools"; - version = "0.0.0.1"; - sha256 = "14lcmxkaxsa42dcyn13cb83lfw48n7139gvppsngzrbn1w9lwrl0"; + version = "0.0.0.2"; + sha256 = "1lcz9xlqxzzv8gq31jcd1lw5l8dw14ixkcg14kq73p0418lwm06z"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -18323,8 +18408,8 @@ self: { }: mkDerivation { pname = "Shpadoinkle-disembodied"; - version = "0.0.0.1"; - sha256 = "0hiwiv4l1k1al0d9fjk48fay6c33shf213yc9blwm15mfj5kh77c"; + version = "0.0.0.2"; + sha256 = "1r96j6lx5k28m0wc4x0pdf81zzml6ppdaw5ywdlv85yxcmv1wxsd"; libraryHaskellDepends = [ base directory filepath servant Shpadoinkle Shpadoinkle-backend-static Shpadoinkle-html Shpadoinkle-router text @@ -18369,29 +18454,55 @@ self: { "Shpadoinkle-html" = callPackage ({ mkDerivation, base, bytestring, compactable, containers - , ghcjs-dom, jsaddle, lens, raw-strings-qq, regex-pcre, Shpadoinkle - , stm, template-haskell, text, time, transformers, unliftio + , directory, ghcjs-dom, jsaddle, lens, process, raw-strings-qq + , regex-pcre, Shpadoinkle, stm, template-haskell, text, time + , transformers, unliftio }: mkDerivation { pname = "Shpadoinkle-html"; - version = "0.3.0.0"; - sha256 = "17n675m9gqfhi2rd8c60bcbljd4nknfrwb02zlw9jwgj1kv7l06k"; + version = "0.3.0.2"; + sha256 = "1wi1b4vnag530iz8xzqih1phwgpr96yv3brizmn6yj9j8d0bf5qz"; libraryHaskellDepends = [ - base bytestring compactable containers ghcjs-dom jsaddle lens - raw-strings-qq regex-pcre Shpadoinkle stm template-haskell text - time transformers unliftio + base bytestring compactable containers directory ghcjs-dom jsaddle + lens process raw-strings-qq regex-pcre Shpadoinkle stm + template-haskell text time transformers unliftio ]; description = "A typed, template generated Html DSL, and helpers"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; }) {}; + "Shpadoinkle-isreal" = callPackage + ({ mkDerivation, aeson, base, bytestring, containers, deepseq + , directory, filepath, process, random, servant, servant-server + , text, time, warp + }: + mkDerivation { + pname = "Shpadoinkle-isreal"; + version = "0.0.0.2"; + sha256 = "1mvc5q5rvsgvgind9pv7389908ikb80qa704vwrzqb2wg2ir5g78"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + aeson base bytestring containers deepseq random servant + servant-server text time + ]; + executableHaskellDepends = [ + aeson base bytestring containers deepseq directory filepath process + random servant servant-server text time warp + ]; + description = "Isreal Swan will make a snowman for you!"; + license = lib.licenses.gpl3Plus; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "Shpadoinkle-lens" = callPackage ({ mkDerivation, base, lens, Shpadoinkle, text }: mkDerivation { pname = "Shpadoinkle-lens"; - version = "0.0.0.3"; - sha256 = "1310ipmw2z8gdnvaqx1bydvc4p1iyhc7xv31vwbx2aszhmi873kq"; + version = "0.0.0.4"; + sha256 = "16lkkyjlxczdcdb8wwj4jvkhi9wsr9d9h5ih6kjdxd9r2qn4zi84"; libraryHaskellDepends = [ base lens Shpadoinkle text ]; description = "Lens combinators for Shpadoinkle applications"; license = lib.licenses.bsd3; @@ -18407,8 +18518,8 @@ self: { }: mkDerivation { pname = "Shpadoinkle-router"; - version = "0.3.0.0"; - sha256 = "1wdr71khi7nmyz4ksf7hy6ya470687wmv4x7bvv7qq2z2dsy5ns2"; + version = "0.3.0.1"; + sha256 = "0xy09nklsjypaw2dmzl4dzdkrhdlzip2jw41mj1vm7xdvas7i7f1"; libraryHaskellDepends = [ aeson base bytestring compactable exceptions ghcjs-dom http-api-data http-media http-types jsaddle jsaddle-warp lens @@ -18425,8 +18536,8 @@ self: { ({ mkDerivation, base, lens, Shpadoinkle, streaming, text }: mkDerivation { pname = "Shpadoinkle-streaming"; - version = "0.0.0.1"; - sha256 = "1bvrkyj9l8asczfamw26x1hwj8bcxr7812zjm1m91jg4xzipayv2"; + version = "0.0.0.2"; + sha256 = "1i86299ss25xd1swxd4rz9k5mvxqzhnafiylaawan2fbp2xwqkq2"; libraryHaskellDepends = [ base lens Shpadoinkle streaming text ]; description = "Integration of the streaming library with Shpadoinkle continuations"; license = lib.licenses.bsd3; @@ -18435,20 +18546,21 @@ self: { }) {}; "Shpadoinkle-template" = callPackage - ({ mkDerivation, base, file-embed, html-parse, Shpadoinkle - , Shpadoinkle-backend-static, template-haskell, text + ({ mkDerivation, base, directory, file-embed, html-entities + , html-parse, process, Shpadoinkle, Shpadoinkle-backend-static + , template-haskell, text }: mkDerivation { pname = "Shpadoinkle-template"; - version = "0.0.0.1"; - sha256 = "1iyxb0hnyfcb4fipwrvzr03g3rai5lc5k7sysrd691l0dsh2jill"; + version = "0.0.0.2"; + sha256 = "1alhlc4w9xcyzan0sbsanip3q0yw9pjg094linwwavb211wbcdkj"; libraryHaskellDepends = [ - base html-parse Shpadoinkle Shpadoinkle-backend-static - template-haskell text + base directory html-entities html-parse process Shpadoinkle + Shpadoinkle-backend-static template-haskell text ]; testHaskellDepends = [ - base file-embed html-parse Shpadoinkle Shpadoinkle-backend-static - template-haskell text + base directory file-embed html-entities html-parse process + Shpadoinkle Shpadoinkle-backend-static template-haskell text ]; description = "Read standard file formats into Shpadoinkle with Template Haskell"; license = lib.licenses.bsd3; @@ -18456,19 +18568,20 @@ self: { }) {}; "Shpadoinkle-widgets" = callPackage - ({ mkDerivation, aeson, base, compactable, containers - , edit-distance, email-validate, hspec, jsaddle, mtl, QuickCheck - , quickcheck-classes, quickcheck-classes-base, Shpadoinkle - , Shpadoinkle-html, stm, template-haskell, text, unliftio + ({ mkDerivation, aeson, attoparsec, base, bytestring, compactable + , containers, edit-distance, either, email-validate, hspec, jsaddle + , mtl, QuickCheck, quickcheck-classes, quickcheck-classes-base + , servant, Shpadoinkle, Shpadoinkle-html, stm, template-haskell + , text, transformers, unliftio }: mkDerivation { pname = "Shpadoinkle-widgets"; - version = "0.2.0.0"; - sha256 = "0q82m3gffcw89xyl0h9ayp2v4k9l1zwpnlpq7kvirl1ahhp2iypy"; + version = "0.2.0.1"; + sha256 = "11ncdip5f01d8ng1rgpprl0adrgca19mww86hybckg8v9lxvyfgc"; libraryHaskellDepends = [ - aeson base compactable containers edit-distance email-validate - jsaddle mtl Shpadoinkle Shpadoinkle-html stm template-haskell text - unliftio + aeson attoparsec base bytestring compactable containers + edit-distance either email-validate jsaddle mtl servant Shpadoinkle + Shpadoinkle-html stm template-haskell text transformers unliftio ]; testHaskellDepends = [ base containers hspec QuickCheck quickcheck-classes @@ -19631,14 +19744,14 @@ self: { "Taxonomy" = callPackage ({ mkDerivation, aeson, base, bytestring, either-unwrap, fgl - , parsec, text, vector + , graphviz, parsec, text, vector }: mkDerivation { pname = "Taxonomy"; - version = "2.1.0"; - sha256 = "1l64ma631q1gh57gwg09mpxz66hkhqbc9f9dn2bhy681p8ia7j50"; + version = "2.2.0"; + sha256 = "0rwm3p510k5nmzbdy8bxdviv37mba0bvygxq92f24wqb5gry8w9w"; libraryHaskellDepends = [ - aeson base bytestring either-unwrap fgl parsec text vector + aeson base bytestring either-unwrap fgl graphviz parsec text vector ]; description = "Libary for parsing, processing and vizualization of taxonomy data"; license = lib.licenses.gpl3Only; @@ -20318,8 +20431,8 @@ self: { }: mkDerivation { pname = "Unixutils"; - version = "1.54.1"; - sha256 = "0i16fg24n6lwn3jlh09bxdv1ip06ympkfvwmcj1nbcjcfhlmaagr"; + version = "1.54.2"; + sha256 = "040wj8mr2k7spwns3vnadcgynqq4h7zy3lf62lvx7gasjmaj5m4w"; libraryHaskellDepends = [ base bytestring directory exceptions filepath mtl process process-extras pureMD5 regex-tdfa unix zlib @@ -20645,8 +20758,8 @@ self: { ({ mkDerivation, base, bytestring, transformers, vector, vulkan }: mkDerivation { pname = "VulkanMemoryAllocator"; - version = "0.5"; - sha256 = "1gar1xb7hbc452ck8351wikvryradna9bpphzd9kqwk0kx76nl3n"; + version = "0.6"; + sha256 = "15hmvswhwy7g0i5ybsjby8x4dwyg0j381rh425kjzv9qbjp4dw2r"; libraryHaskellDepends = [ base bytestring transformers vector vulkan ]; @@ -21313,14 +21426,14 @@ self: { }) {}; "X11" = callPackage - ({ mkDerivation, base, data-default, libX11, libXext, libXinerama - , libXrandr, libXrender, libXScrnSaver + ({ mkDerivation, base, data-default-class, libX11, libXext + , libXinerama, libXrandr, libXrender, libXScrnSaver }: mkDerivation { pname = "X11"; - version = "1.9.2"; - sha256 = "013yny4dwbs98kp7245j8dv81h4p1cdwn2rsf2hvhsplg6ixkc05"; - libraryHaskellDepends = [ base data-default ]; + version = "1.10"; + sha256 = "1zrdqryx99izjvsrsalb65ihpmikm9r6cjlci7cfp6wlwa3i585n"; + libraryHaskellDepends = [ base data-default-class ]; librarySystemDepends = [ libX11 libXext libXinerama libXrandr libXrender libXScrnSaver ]; @@ -21779,17 +21892,17 @@ self: { "Z-Botan" = callPackage ({ mkDerivation, base, Cabal, directory, filepath, ghc-prim, hspec - , hspec-discover, HUnit, integer-gmp, QuickCheck + , hspec-discover, HUnit, integer-gmp, primitive, QuickCheck , quickcheck-instances, scientific, stm, time, Z-Data, Z-IO }: mkDerivation { pname = "Z-Botan"; - version = "0.3.1.0"; - sha256 = "0920pzs9q105h32d7yp83bblhq0id5vzzw3d2pysg4dd127933xc"; + version = "0.4.0.0"; + sha256 = "0jlw9wk8yhgsqjn3grzkq2a1p90dil1ayx30cvg85c2y96j5x8jn"; enableSeparateDataOutput = true; setupHaskellDepends = [ base Cabal directory filepath ]; libraryHaskellDepends = [ - base ghc-prim integer-gmp scientific stm time Z-Data Z-IO + base ghc-prim integer-gmp primitive scientific stm time Z-Data Z-IO ]; libraryToolDepends = [ hspec-discover ]; testHaskellDepends = [ @@ -21804,17 +21917,18 @@ self: { ({ mkDerivation, base, bytestring, Cabal, case-insensitive , containers, deepseq, ghc-prim, hashable, hspec, hspec-discover , HUnit, integer-gmp, primitive, QuickCheck, quickcheck-instances - , scientific, tagged, template-haskell, time, unordered-containers + , scientific, tagged, template-haskell, time, unicode-collation + , unordered-containers }: mkDerivation { pname = "Z-Data"; - version = "0.8.2.0"; - sha256 = "0xjy5689ck23fyas52qrfrl716fpgmnahp7pln54yyz106hxqj4p"; + version = "0.8.8.0"; + sha256 = "01x0z7fv0nyyisc9ras79nwbys4g9d13kxwnvgdi8m9p6jvcgy8s"; setupHaskellDepends = [ base Cabal ]; libraryHaskellDepends = [ base bytestring case-insensitive containers deepseq ghc-prim hashable integer-gmp primitive QuickCheck scientific tagged - template-haskell time unordered-containers + template-haskell time unicode-collation unordered-containers ]; testHaskellDepends = [ base containers hashable hspec HUnit integer-gmp primitive @@ -21836,8 +21950,8 @@ self: { }: mkDerivation { pname = "Z-IO"; - version = "0.8.0.0"; - sha256 = "000ziih2c33v5mbf9sljkrr0x9hxv31cq77blva6xy32zzh12yz3"; + version = "0.8.1.1"; + sha256 = "05d4dbvzdr2sall0sj9yh8hv09lh1af4bqfhnbss2jlj1jc1y1dr"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -23692,10 +23806,8 @@ self: { }: mkDerivation { pname = "active"; - version = "0.2.0.14"; - sha256 = "0x3b4ln6csa554qls28wbxvclkbdz3yi60i1m0q5ing0cs16fifz"; - revision = "1"; - editedCabalFile = "01j431dkl3ax98g974v6mgxv9xha4c0hlpjqq5fvh7l8lyjan676"; + version = "0.2.0.15"; + sha256 = "019xr66pahsssqr2hybs88mga4qshv1vmd22j7624wqafqm57d74"; libraryHaskellDepends = [ base lens linear semigroupoids semigroups vector ]; @@ -23928,6 +24040,7 @@ self: { description = "A full-featured library for parsing, validating, and rendering email addresses"; license = lib.licenses.bsd2; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "adhoc-network" = callPackage @@ -24160,8 +24273,8 @@ self: { }: mkDerivation { pname = "aern2-mp"; - version = "0.2.1.1"; - sha256 = "1fsdvjancc2mi9i7l1gaqqvhnafchvw37hrn9ksd20djy43gzwyw"; + version = "0.2.7.0"; + sha256 = "1gsqaggg6mpcpl9s3z566gmbynj4l6n1fhni5b0p8pf5hj8n93gg"; libraryHaskellDepends = [ base cdar-mBound collect-errors deepseq hspec integer-logarithms mixed-types-num QuickCheck reflection regex-tdfa template-haskell @@ -24182,12 +24295,16 @@ self: { }: mkDerivation { pname = "aern2-real"; - version = "0.2.1.0"; - sha256 = "06nz820p5gillvyjnx7bhmadpc0mrkvg8wiz9zmpcj6d23f28vzg"; + version = "0.2.7.0"; + sha256 = "0dsph1775rifr9vvx4w7v55bryqmh04fhk6nyk7d91yhn1sf6wc9"; libraryHaskellDepends = [ aern2-mp base collect-errors hspec integer-logarithms mixed-types-num QuickCheck ]; + testHaskellDepends = [ + aern2-mp base collect-errors hspec integer-logarithms + mixed-types-num QuickCheck + ]; description = "Real numbers as sequences of MPBalls"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; @@ -24929,8 +25046,8 @@ self: { }: mkDerivation { pname = "aeson-schemas"; - version = "1.3.3"; - sha256 = "1dhi4pf8ariqr5g79cnr52rxfi1ywp2sv9sazw51rgv1k4gb3492"; + version = "1.3.4"; + sha256 = "087pjsjycna4hlzn72bik4jfd8vclfyqh730zll4a2dc7l776g5x"; libraryHaskellDepends = [ aeson base first-class-families hashable megaparsec template-haskell text unordered-containers @@ -25054,20 +25171,21 @@ self: { "aeson-typescript" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, directory - , filepath, hspec, interpolate, mtl, process, template-haskell - , temporary, text, th-abstraction, unordered-containers + , filepath, hspec, mtl, process, string-interpolate + , template-haskell, temporary, text, th-abstraction + , unordered-containers }: mkDerivation { pname = "aeson-typescript"; - version = "0.3.0.0"; - sha256 = "054mhzsywbprccvp5pqscj9f92dvkrxgzpxz16bfadxn98wa1j7h"; + version = "0.3.0.1"; + sha256 = "0xbj6m1lxpv4qclz5msrdplpy3mdxq5icjl3fq4bwbqy5rs6vczv"; libraryHaskellDepends = [ - aeson base containers interpolate mtl template-haskell text + aeson base containers mtl string-interpolate template-haskell text th-abstraction unordered-containers ]; testHaskellDepends = [ - aeson base bytestring containers directory filepath hspec - interpolate mtl process template-haskell temporary text + aeson base bytestring containers directory filepath hspec mtl + process string-interpolate template-haskell temporary text th-abstraction unordered-containers ]; description = "Generate TypeScript definition files from your ADTs"; @@ -25411,16 +25529,20 @@ self: { }) {}; "agda2lagda" = callPackage - ({ mkDerivation, base, directory, filepath, optparse-applicative }: + ({ mkDerivation, base, directory, filepath, goldplate + , optparse-applicative, process + }: mkDerivation { pname = "agda2lagda"; - version = "0.2020.11.1"; - sha256 = "0yl44jdczy9306b5ifd8iwchr8izna8sd5v2h2qm9ns909wcs1l8"; + version = "0.2021.6.1"; + sha256 = "1108xzl4fv86qpasg1wbc26bypd06s41kmgzybrggc76pv15hbis"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ base directory filepath optparse-applicative ]; + testHaskellDepends = [ base process ]; + testToolDepends = [ goldplate ]; description = "Translate .agda files into .lagda.tex files."; license = lib.licenses.publicDomain; }) {}; @@ -26624,7 +26746,7 @@ self: { }) {}; "alsa" = callPackage - ({ mkDerivation, alsaLib, array, base, extensible-exceptions + ({ mkDerivation, alsa-lib, array, base, extensible-exceptions , sample-frame }: mkDerivation { @@ -26634,27 +26756,27 @@ self: { libraryHaskellDepends = [ array base extensible-exceptions sample-frame ]; - librarySystemDepends = [ alsaLib ]; + librarySystemDepends = [ alsa-lib ]; description = "Binding to the ALSA Library API"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; broken = true; - }) {inherit (pkgs) alsaLib;}; + }) {inherit (pkgs) alsa-lib;}; "alsa-core" = callPackage - ({ mkDerivation, alsaLib, base, extensible-exceptions }: + ({ mkDerivation, alsa-lib, base, extensible-exceptions }: mkDerivation { pname = "alsa-core"; version = "0.5.0.1"; sha256 = "1avh4a419h9d2zsslg6j8hm87ppgsgqafz8ll037rk2yy1g4jl7b"; libraryHaskellDepends = [ base extensible-exceptions ]; - libraryPkgconfigDepends = [ alsaLib ]; + libraryPkgconfigDepends = [ alsa-lib ]; description = "Binding to the ALSA Library API (Exceptions)"; license = lib.licenses.bsd3; platforms = [ "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" ]; - }) {inherit (pkgs) alsaLib;}; + }) {inherit (pkgs) alsa-lib;}; "alsa-gui" = callPackage ({ mkDerivation, alsa-core, alsa-seq, base, midi, midi-alsa, wx @@ -26675,7 +26797,7 @@ self: { }) {}; "alsa-midi" = callPackage - ({ mkDerivation, alsaLib, array, base, event-list, midi + ({ mkDerivation, alsa-lib, array, base, event-list, midi , non-negative }: mkDerivation { @@ -26688,32 +26810,32 @@ self: { libraryHaskellDepends = [ array base event-list midi non-negative ]; - librarySystemDepends = [ alsaLib ]; - executableSystemDepends = [ alsaLib ]; + librarySystemDepends = [ alsa-lib ]; + executableSystemDepends = [ alsa-lib ]; description = "Bindings for the ALSA sequencer API (MIDI stuff)"; license = "GPL"; hydraPlatforms = lib.platforms.none; broken = true; - }) {inherit (pkgs) alsaLib;}; + }) {inherit (pkgs) alsa-lib;}; "alsa-mixer" = callPackage - ({ mkDerivation, alsa-core, alsaLib, base, c2hs, unix }: + ({ mkDerivation, alsa-core, alsa-lib, base, c2hs, unix }: mkDerivation { pname = "alsa-mixer"; version = "0.3.0"; sha256 = "00ny2p3276jilidjs44npc8zmbhynz3f2lpmlwwl6swwx5yijsnb"; libraryHaskellDepends = [ alsa-core base unix ]; - librarySystemDepends = [ alsaLib ]; + librarySystemDepends = [ alsa-lib ]; libraryToolDepends = [ c2hs ]; description = "Bindings to the ALSA simple mixer API"; license = lib.licenses.bsd3; platforms = [ "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" ]; - }) {inherit (pkgs) alsaLib;}; + }) {inherit (pkgs) alsa-lib;}; "alsa-pcm" = callPackage - ({ mkDerivation, alsa-core, alsaLib, array, base + ({ mkDerivation, alsa-core, alsa-lib, array, base , extensible-exceptions, sample-frame, semigroups, storable-record }: mkDerivation { @@ -26726,13 +26848,13 @@ self: { alsa-core array base extensible-exceptions sample-frame semigroups storable-record ]; - libraryPkgconfigDepends = [ alsaLib ]; + libraryPkgconfigDepends = [ alsa-lib ]; description = "Binding to the ALSA Library API (PCM audio)"; license = lib.licenses.bsd3; platforms = [ "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" ]; - }) {inherit (pkgs) alsaLib;}; + }) {inherit (pkgs) alsa-lib;}; "alsa-pcm-tests" = callPackage ({ mkDerivation, alsa, base }: @@ -26749,7 +26871,7 @@ self: { }) {}; "alsa-seq" = callPackage - ({ mkDerivation, alsa-core, alsaLib, array, base, bytestring + ({ mkDerivation, alsa-core, alsa-lib, array, base, bytestring , data-accessor, enumset, extensible-exceptions, poll, transformers , utility-ht }: @@ -26763,13 +26885,13 @@ self: { alsa-core array base bytestring data-accessor enumset extensible-exceptions poll transformers utility-ht ]; - libraryPkgconfigDepends = [ alsaLib ]; + libraryPkgconfigDepends = [ alsa-lib ]; description = "Binding to the ALSA Library API (MIDI sequencer)"; license = lib.licenses.bsd3; platforms = [ "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" ]; - }) {inherit (pkgs) alsaLib;}; + }) {inherit (pkgs) alsa-lib;}; "alsa-seq-tests" = callPackage ({ mkDerivation, alsa, base }: @@ -28961,6 +29083,8 @@ self: { ]; description = "Provides conduits to upload data to S3 using the Multipart API"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "amazonka-sagemaker" = callPackage @@ -30697,8 +30821,8 @@ self: { ({ mkDerivation, base, ghc-prim, integer-gmp }: mkDerivation { pname = "aop-prelude"; - version = "0.4.0.0"; - sha256 = "0jg572zz9lbhpp4bxldrc0gs0ac0f4hfcrxds77gr51xizxfa7cn"; + version = "0.4.1.1"; + sha256 = "0b8y58hiil7caqwn3q041r59qvm8jw2s8z8ydhs2ma7a7lrlqffm"; libraryHaskellDepends = [ base ghc-prim integer-gmp ]; testHaskellDepends = [ base ghc-prim ]; description = "prelude for Algebra of Programming"; @@ -30755,8 +30879,8 @@ self: { ({ mkDerivation, base, inspection-testing, transformers }: mkDerivation { pname = "ap-normalize"; - version = "0.1.0.0"; - sha256 = "0iqfilamnp0k170af7sw0ydn0cmba7ab06yinkl8vfppf583a4la"; + version = "0.1.0.1"; + sha256 = "1212zxc4qn6msk0w13yhrza2qjs79h78misllb4chng75jqi61l2"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base inspection-testing transformers ]; description = "Self-normalizing applicative expressions"; @@ -31673,8 +31797,8 @@ self: { }: mkDerivation { pname = "apply-refact"; - version = "0.9.2.0"; - sha256 = "1j0afdl6g51wyb3g47wss15v0yl50n23k3icbyla8h89rxh74lcx"; + version = "0.9.3.0"; + sha256 = "1sn5g71sx8xa4ggyk49m661iip6zrzl65vb87l16l31kf79bbm7w"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -32134,21 +32258,21 @@ self: { , bytestring, Cabal, conduit, conduit-extra, containers, deepseq , Diff, directory, filepath, hackage-db, http-client , http-client-tls, megaparsec, microlens, microlens-th - , neat-interpolation, optparse-applicative, polysemy, prettyprinter + , neat-interpolation, optparse-simple, polysemy, prettyprinter , prettyprinter-ansi-terminal, servant-client, split, tar-conduit , template-haskell, text }: mkDerivation { pname = "arch-hs"; - version = "0.8.0.0"; - sha256 = "1g33ss6jvvpdgpcl0kwmbvnkawq8cngphjmsbv0jcpnh17brgf8x"; + version = "0.9.0.0"; + sha256 = "09i5b4pdbc1x7977icq0m7amk59iy0822ki5dlhd7y74m2dmdf9z"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ aeson algebraic-graphs arch-web base bytestring Cabal conduit conduit-extra containers deepseq Diff directory filepath hackage-db http-client http-client-tls megaparsec microlens microlens-th - neat-interpolation optparse-applicative polysemy prettyprinter + neat-interpolation optparse-simple polysemy prettyprinter prettyprinter-ansi-terminal servant-client split tar-conduit template-haskell text ]; @@ -32156,7 +32280,7 @@ self: { aeson algebraic-graphs arch-web base bytestring Cabal conduit conduit-extra containers deepseq Diff directory filepath hackage-db http-client http-client-tls megaparsec microlens microlens-th - neat-interpolation optparse-applicative polysemy prettyprinter + neat-interpolation optparse-simple polysemy prettyprinter prettyprinter-ansi-terminal servant-client split tar-conduit template-haskell text ]; @@ -32571,8 +32695,8 @@ self: { }: mkDerivation { pname = "arion-compose"; - version = "0.1.2.0"; - sha256 = "1vginzc90xl8fs1pr9qvw7fjj207vjb1k3rxa341hq7q5pri2y3d"; + version = "0.1.3.0"; + sha256 = "1pw0vqx1y3zgq303gdgd3vkz95mqrv8hl0pfkw6kyc49hj7l864y"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -32690,15 +32814,15 @@ self: { "arithmoi" = callPackage ({ mkDerivation, array, base, chimera, constraints, containers - , deepseq, exact-pi, gauge, integer-gmp, integer-logarithms - , integer-roots, mod, QuickCheck, quickcheck-classes, random - , semirings, smallcheck, tasty, tasty-hunit, tasty-quickcheck - , tasty-rerun, tasty-smallcheck, transformers, vector + , deepseq, exact-pi, integer-gmp, integer-logarithms, integer-roots + , mod, QuickCheck, quickcheck-classes, random, semirings + , smallcheck, tasty, tasty-bench, tasty-hunit, tasty-quickcheck + , tasty-rerun, tasty-smallcheck, transformers, vector, vector-sized }: mkDerivation { pname = "arithmoi"; - version = "0.11.0.1"; - sha256 = "1dz6gpwnyw02lff8xh5vmf1vsknnvnd3vh3iix0r6f1hkf03xi8y"; + version = "0.12.0.0"; + sha256 = "1lghgr4z2vhafj8d8971pdghih6r5qq5xlc0b87jmazyhzz95w3f"; configureFlags = [ "-f-llvm" ]; libraryHaskellDepends = [ array base chimera constraints containers deepseq exact-pi @@ -32707,12 +32831,13 @@ self: { ]; testHaskellDepends = [ base containers exact-pi integer-gmp integer-roots mod QuickCheck - quickcheck-classes semirings smallcheck tasty tasty-hunit + quickcheck-classes random semirings smallcheck tasty tasty-hunit tasty-quickcheck tasty-rerun tasty-smallcheck transformers vector + vector-sized ]; benchmarkHaskellDepends = [ - array base constraints containers deepseq gauge integer-logarithms - mod random semirings vector + array base constraints containers deepseq integer-logarithms mod + random semirings tasty-bench vector ]; description = "Efficient basic number-theoretic functions"; license = lib.licenses.mit; @@ -32753,8 +32878,8 @@ self: { }: mkDerivation { pname = "armor"; - version = "0.2"; - sha256 = "1flidqihfgb1vwikm3q4dyjdjzrc5z2955ph6h30q0dyv4707s94"; + version = "0.2.0.1"; + sha256 = "1pp9y7y9i01mbnkrx4870m4a4crpyzikpi4w8znn3avjbl5c1bxx"; libraryHaskellDepends = [ base bytestring containers directory filepath hashable HUnit lens ]; @@ -33505,6 +33630,8 @@ self: { testToolDepends = [ doctest-discover hspec-discover ]; description = "Library for creating and querying segmented feeds"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "asil" = callPackage @@ -33996,8 +34123,8 @@ self: { }: mkDerivation { pname = "astro"; - version = "0.4.2.1"; - sha256 = "0agy9a91n1sy6rgdgwvdz354x452j2lg7nr3by7z9r22rwdxwpfs"; + version = "0.4.3.0"; + sha256 = "1zbraw0l40r190vw9dc7bwwcrac4p6yqwng5qa8n277v6cwy5kv5"; libraryHaskellDepends = [ base matrix time ]; testHaskellDepends = [ base HUnit QuickCheck test-framework test-framework-hunit @@ -35013,7 +35140,6 @@ self: { ]; description = "Parse IP data types with attoparsec"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "attoparsec-iso8601" = callPackage @@ -35154,7 +35280,6 @@ self: { ]; description = "URI parser / printer using attoparsec"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "attoparsec-varword" = callPackage @@ -35335,8 +35460,8 @@ self: { }: mkDerivation { pname = "aura"; - version = "3.2.4"; - sha256 = "0d3v3kpy4acd7pyysy5dw25b4154v7jwgydipmrczfxicrf02aa0"; + version = "3.2.5"; + sha256 = "1zrsjcvmhh3y0pahnz2fr944j2xz8sv4dcd9xz08vci4x1lm87hr"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -35423,6 +35548,25 @@ self: { license = lib.licenses.bsd3; }) {}; + "authenticate-oauth_1_7" = callPackage + ({ mkDerivation, base, base64-bytestring, blaze-builder, bytestring + , crypto-pubkey-types, data-default, http-client, http-types + , random, RSA, SHA, time, transformers, transformers-compat + }: + mkDerivation { + pname = "authenticate-oauth"; + version = "1.7"; + sha256 = "0y4v46rn0cvm0sr1v8qq1zgzllrlrr3ji5gij1xprgf1zsazcvvl"; + libraryHaskellDepends = [ + base base64-bytestring blaze-builder bytestring crypto-pubkey-types + data-default http-client http-types random RSA SHA time + transformers transformers-compat + ]; + description = "Library to authenticate with OAuth for Haskell web applications"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "authinfo-hs" = callPackage ({ mkDerivation, attoparsec, base, network, text }: mkDerivation { @@ -35933,6 +36077,44 @@ self: { license = lib.licenses.bsd3; }) {}; + "avro_0_5_2_1" = callPackage + ({ mkDerivation, aeson, array, base, base16-bytestring, bifunctors + , binary, bytestring, containers, data-binary-ieee754, deepseq + , directory, doctest, doctest-discover, extra, fail, gauge + , generic-lens, HasBigDecimal, hashable, hedgehog, hspec + , hspec-discover, hw-hspec-hedgehog, lens, lens-aeson, mtl + , QuickCheck, random, raw-strings-qq, scientific, semigroups + , tagged, template-haskell, text, tf-random, time, transformers + , unordered-containers, uuid, vector, zlib + }: + mkDerivation { + pname = "avro"; + version = "0.5.2.1"; + sha256 = "0g10nbcxz5ff7rckbzwb4sxh1qqg6ay5zwakmlxrsfj9srg8dq2d"; + libraryHaskellDepends = [ + aeson array base base16-bytestring bifunctors binary bytestring + containers data-binary-ieee754 deepseq fail HasBigDecimal hashable + mtl raw-strings-qq scientific semigroups tagged template-haskell + text tf-random time unordered-containers uuid vector zlib + ]; + testHaskellDepends = [ + aeson array base base16-bytestring bifunctors binary bytestring + containers directory doctest doctest-discover extra fail + generic-lens HasBigDecimal hashable hedgehog hspec + hw-hspec-hedgehog lens lens-aeson mtl QuickCheck raw-strings-qq + scientific semigroups tagged text tf-random time transformers + unordered-containers uuid vector zlib + ]; + testToolDepends = [ doctest-discover hspec-discover ]; + benchmarkHaskellDepends = [ + aeson base binary bytestring containers deepseq gauge hashable mtl + random raw-strings-qq text transformers unordered-containers vector + ]; + description = "Avro serialization support for Haskell"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "avro-piper" = callPackage ({ mkDerivation, aeson, avro, base, bytestring, conduit , conduit-combinators, conduit-extra, hedgehog, hspec @@ -36107,8 +36289,8 @@ self: { }: mkDerivation { pname = "aws-cloudfront-signed-cookies"; - version = "0.2.0.6"; - sha256 = "19kzrmjw3vfv3v1s35fqdvixlxha43sdb29d60fwjkzvg7al9scv"; + version = "0.2.0.8"; + sha256 = "07640asv46gvqqzv8d050x19b2j6wjasm98gpy6047aqg1a6f3ac"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -36449,8 +36631,8 @@ self: { }: mkDerivation { pname = "aws-lambda-haskell-runtime"; - version = "4.1.0"; - sha256 = "1zb426bj1k3b3sp5hlg0ajx19mf0vwvr39zdg6p9l9i830qfdjfw"; + version = "4.1.1"; + sha256 = "0w4pdyagcs7m05kccdq0x3s1d4vbr2ihqjrbill0p0gn25q9h6cc"; libraryHaskellDepends = [ aeson base bytestring case-insensitive exceptions hashable http-client http-types mtl path path-io safe-exceptions-checked @@ -36780,8 +36962,8 @@ self: { }: mkDerivation { pname = "aws-xray-client-persistent"; - version = "0.1.0.0"; - sha256 = "02aig9j9asbkxni7bmyay1vhs7flf0gz401yldcq4n824c9q8h6f"; + version = "0.1.0.1"; + sha256 = "1b45g9gswr2c16xphprqkrpyh2q29kgnr10hm29zjw5pcahgc8mg"; libraryHaskellDepends = [ aws-xray-client base conduit containers lens persistent random resourcet text time @@ -38041,6 +38223,30 @@ self: { license = lib.licenses.bsd3; }) {}; + "base32_0_2_1_0" = callPackage + ({ mkDerivation, base, bytestring, criterion, deepseq + , ghc-byteorder, memory, QuickCheck, random-bytestring, tasty + , tasty-hunit, tasty-quickcheck, text, text-short + }: + mkDerivation { + pname = "base32"; + version = "0.2.1.0"; + sha256 = "1c1qzbri6m8b2m1cr68vrjbny6wlvfyrbfyzd61s83a3y3w39plp"; + libraryHaskellDepends = [ + base bytestring deepseq ghc-byteorder text text-short + ]; + testHaskellDepends = [ + base bytestring memory QuickCheck random-bytestring tasty + tasty-hunit tasty-quickcheck text text-short + ]; + benchmarkHaskellDepends = [ + base bytestring criterion deepseq memory random-bytestring text + ]; + description = "Fast RFC 4648-compliant Base32 encoding"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "base32-bytestring" = callPackage ({ mkDerivation, base, bits-extras, bytestring, cpu, criterion , hspec, QuickCheck @@ -38175,7 +38381,6 @@ self: { ]; description = "Base62 encoding and decoding"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "base64" = callPackage @@ -39450,6 +39655,8 @@ self: { pname = "bench-show"; version = "0.3.1"; sha256 = "0z1fdcdl9chwia9kd5pa9572mc5pmy5bld72axkzg20r7v53sr7k"; + revision = "1"; + editedCabalFile = "08a95i3xwy2yz549hqfwd3j0j6gbsbc62jjmpxnk43yk5dl8dk63"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -39483,8 +39690,8 @@ self: { ({ mkDerivation, base, bytestring, mtl, time }: mkDerivation { pname = "benchpress"; - version = "0.2.2.16"; - sha256 = "0p8wxd7liz7ihqlqhk1l8z3hn7hc24qlf69ykxixp69jx479dkan"; + version = "0.2.2.17"; + sha256 = "17bwjhy4rrlpk7ni16nh2f1yjrjyj392g4h2z3vxrnkjxfadxx3r"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base mtl time ]; @@ -41274,8 +41481,8 @@ self: { ({ mkDerivation, base, bindings-DSL }: mkDerivation { pname = "bindings-libpci"; - version = "0.4.0.0"; - sha256 = "18vjsgvndmxbxvyapxkgkx36qgh2yrdg8dfaqpcd9zr3yl84kxnq"; + version = "0.4.0.1"; + sha256 = "01wsk8qr1wky0x5pmpw3nljrjbxyf3hd2kgd5vsmcn71gj436hl9"; libraryHaskellDepends = [ base bindings-DSL ]; description = "Low level bindings to libpci"; license = lib.licenses.bsd3; @@ -42056,8 +42263,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "birds-of-paradise"; - version = "0.2.0.0"; - sha256 = "1jkj8li8yxl9kk5i8p63p9jkdcvdznmh473n12dxzimxnh15sf1y"; + version = "0.2.1.1"; + sha256 = "0gn1dkycqal2xvmprq6xqz19qnpxvhwck4h8fqc8gq30nzpq143r"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base ]; description = "Birds of Paradise"; @@ -42086,6 +42293,43 @@ self: { license = lib.licenses.gpl3Only; }) {inherit (pkgs) snappy;}; + "biscuit-haskell" = callPackage + ({ mkDerivation, async, attoparsec, base, base16-bytestring, base64 + , bytestring, cereal, containers, libsodium, mtl + , parser-combinators, primitive, protobuf, random, regex-tdfa + , tasty, tasty-hunit, template-haskell, text, th-lift-instances + , time, validation-selective + }: + mkDerivation { + pname = "biscuit-haskell"; + version = "0.1.0.0"; + sha256 = "0h37sl493ribsvqw98xy4g9vii3xc3ap6vvjffn7xg29b62s0lrx"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + async attoparsec base base16-bytestring base64 bytestring cereal + containers libsodium mtl parser-combinators primitive protobuf + random regex-tdfa template-haskell text th-lift-instances time + validation-selective + ]; + executableHaskellDepends = [ + async attoparsec base base16-bytestring base64 bytestring cereal + containers libsodium mtl parser-combinators primitive protobuf + random template-haskell text th-lift-instances time + validation-selective + ]; + testHaskellDepends = [ + async attoparsec base base16-bytestring base64 bytestring cereal + containers libsodium mtl parser-combinators primitive protobuf + random tasty tasty-hunit template-haskell text th-lift-instances + time validation-selective + ]; + description = "Library support for the Biscuit security token"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "bisect-binary" = callPackage ({ mkDerivation, base, bytestring, directory, filepath, hashable , haskeline, integer-logarithms, optparse-applicative, process @@ -42315,18 +42559,18 @@ self: { }) {}; "bitcoin-compact-filters" = callPackage - ({ mkDerivation, aeson, base, base16-bytestring, bitstream - , bytestring, cereal, haskoin-core, memory, tasty, tasty-hunit - , tasty-quickcheck, text, transformers + ({ mkDerivation, aeson, base, bitstream, bytestring, cereal + , haskoin-core, memory, tasty, tasty-hunit, tasty-quickcheck, text + , transformers }: mkDerivation { pname = "bitcoin-compact-filters"; - version = "0.1.0.1"; - sha256 = "1ifs7yi34x5nfhy0bs9w6arz7f6kwfxl0wgl6s0iwd1z94s5ysk1"; + version = "0.1.0.2"; + sha256 = "1cay53gbm9r5wrpk0sjq086n08lns20xsqb27hgw6a2hfcj7zai2"; enableSeparateDataOutput = true; libraryHaskellDepends = [ - base base16-bytestring bitstream bytestring cereal haskoin-core - memory text transformers + base bitstream bytestring cereal haskoin-core memory text + transformers ]; testHaskellDepends = [ aeson base bytestring cereal haskoin-core tasty tasty-hunit @@ -44012,8 +44256,8 @@ self: { }: mkDerivation { pname = "blucontrol"; - version = "0.3.0.1"; - sha256 = "06hmk4pg5qfcj6smzpn549d1jcsvcbgi2pxgvgvn9k7lab9cb5kg"; + version = "0.5.1.1"; + sha256 = "0v3ifwxjbxm86ybn5daqqfdm4nmbfzlbkyc19d4nawnzjyf8v2p9"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -44054,6 +44298,8 @@ self: { ]; description = "Configurable blue light filter"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {inherit (pkgs.xorg) libX11; inherit (pkgs.xorg) libXrandr;}; "bluemix-sdk" = callPackage @@ -45050,6 +45296,8 @@ self: { pname = "bounded-array"; version = "0.1.0.0"; sha256 = "0zv5a82rm6hwikgls2hw9d18igvfgw655s5pw5h1xbwcv1d8d0ji"; + revision = "2"; + editedCabalFile = "1j04il1kw0r3sy1dv3b3lffkxvnka7ic25jx174wzd0myqbr9zpr"; libraryHaskellDepends = [ array base ]; description = "Arrays with a value for every index"; license = lib.licenses.bsd3; @@ -46359,8 +46607,8 @@ self: { }: mkDerivation { pname = "bugsnag-hs"; - version = "0.2.0.3"; - sha256 = "0jxanklslf0gjw4gb01yz03p2haxmnrmr5wry451lff17azxwlg5"; + version = "0.2.0.4"; + sha256 = "1g5390vmw979gd30jx6v370kb317mvw2x9sw1z7kv44j19vv4k39"; enableSeparateDataOutput = true; libraryHaskellDepends = [ aeson base bytestring http-client text time unordered-containers @@ -46412,6 +46660,28 @@ self: { license = lib.licenses.bsd3; }) {}; + "bugzilla-redhat_0_3_2" = callPackage + ({ mkDerivation, aeson, base, blaze-builder, bytestring, connection + , containers, hspec, http-conduit, http-types, iso8601-time + , resourcet, text, time, transformers, unordered-containers, vector + }: + mkDerivation { + pname = "bugzilla-redhat"; + version = "0.3.2"; + sha256 = "1f2v2mqbyjlv6xj9vxdzbl1kba5smpkb38dxprp13d33jf2rxamm"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + aeson base blaze-builder bytestring connection containers + http-conduit http-types iso8601-time resourcet text time + transformers unordered-containers vector + ]; + testHaskellDepends = [ aeson base hspec time ]; + description = "A Haskell interface to the Bugzilla native REST API"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "build" = callPackage ({ mkDerivation, algebraic-graphs, base, containers, extra , filepath, mtl, random, transformers @@ -46992,8 +47262,8 @@ self: { }: mkDerivation { pname = "byline"; - version = "1.1.0.1"; - sha256 = "1vj17x2czfks5bdns8181iw7rbfghk9pgx5f75xwzn9p6xycg9hy"; + version = "1.1.1"; + sha256 = "0yy9hd8yhpi175fgnp8cd4h0bifx2zvy82jmbkd28kpbgw6b49vi"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -47101,7 +47371,6 @@ self: { ]; description = "Serialize to a small byte arrays"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "bytedump" = callPackage @@ -47247,7 +47516,6 @@ self: { ]; description = "Nonresumable byte parser"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "bytestring_0_11_1_0" = callPackage @@ -47684,8 +47952,8 @@ self: { pname = "bytestring-trie"; version = "0.2.5.0"; sha256 = "1jpynpyarikxhlc4ifdswvkj0ph9fd5d0vcxhjv0lrv0zwqvv488"; - revision = "1"; - editedCabalFile = "1qpv52ywp8r30s3m9qyjiqiwa6clg3zp095yhs2d4533amprryly"; + revision = "2"; + editedCabalFile = "0z2d6k7w2bzjdjvhk5aa5a8j6x5m84xj03rgb4jb70psifmzkg9f"; libraryHaskellDepends = [ base binary bytestring ]; description = "An efficient finite map from (byte)strings to values"; license = lib.licenses.bsd3; @@ -47807,6 +48075,8 @@ self: { pname = "bzlib"; version = "0.5.1.0"; sha256 = "1n599xwyxghf52kam30k1l2qh8cg91h55c2bgchnqyj103hb7nfy"; + revision = "1"; + editedCabalFile = "0r9b9y5qlz9k8wdzb23jif9wgvxi7r652i9apwzdaq7g1l08i6ky"; libraryHaskellDepends = [ base bytestring ]; librarySystemDepends = [ bzip2 ]; description = "Compression and decompression in the bzip2 format"; @@ -47922,6 +48192,18 @@ self: { license = lib.licenses.bsd3; }) {}; + "c-struct" = callPackage + ({ mkDerivation, array, base, primitive, template-haskell }: + mkDerivation { + pname = "c-struct"; + version = "0.1.0.1"; + sha256 = "0932b00zhhss86baj6cqhvn4f66l6z8dax58l4gbaif81w9281zw"; + libraryHaskellDepends = [ array base primitive template-haskell ]; + testHaskellDepends = [ array base primitive template-haskell ]; + description = "To make a wrapper for struct of C language"; + license = lib.licenses.bsd3; + }) {}; + "c0check" = callPackage ({ mkDerivation, base, c0parser }: mkDerivation { @@ -48006,8 +48288,8 @@ self: { }: mkDerivation { pname = "c2hs"; - version = "0.28.7"; - sha256 = "0ib7ayfn37krsnm710x4gxd2i88xv3djnqa737gbw93b0206l571"; + version = "0.28.8"; + sha256 = "0k482wv94jbpwd96a2c2lc7qz9k8072slx7l7943472nzk7k41ir"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -48727,10 +49009,8 @@ self: { }: mkDerivation { pname = "cabal-install-parsers"; - version = "0.4.1"; - sha256 = "1djw4l0z8nsaby2qcm08kvn2p1c35ynzdg25vc815dx2wpw38bh3"; - revision = "1"; - editedCabalFile = "1fhjz4hji57sg00nb8jchvm8b13wn9pknnycgcclvxa3s72rqsf5"; + version = "0.4.2"; + sha256 = "08ny95sryii4nzyy8b2zf15vk329y84gbvpy7302hnjxanc6awx5"; libraryHaskellDepends = [ aeson base base16-bytestring binary binary-instances bytestring Cabal containers cryptohash-sha256 deepseq directory filepath lukko @@ -48920,8 +49200,8 @@ self: { }: mkDerivation { pname = "cabal-rpm"; - version = "2.0.8"; - sha256 = "18ryg2qv1ppxkylgniw4iava9gh410pp6ibm1362ij52128z6rhz"; + version = "2.0.9"; + sha256 = "1r6a0dki4wsrmq5xfjb9bkj0dl7cnhwdf46427k71ay90hmc6ncq"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -49532,11 +49812,11 @@ self: { }) {}; "cachix" = callPackage - ({ mkDerivation, async, base, base64-bytestring, boost, bytestring + ({ mkDerivation, async, base, base64-bytestring, bytestring , cachix-api, concurrent-extra, conduit, conduit-extra, containers , cookie, cryptonite, dhall, directory, ed25519, filepath, fsnotify - , here, hspec, hspec-discover, http-client, http-client-tls - , http-conduit, http-types, inline-c, inline-c-cpp, lzma-conduit + , hercules-ci-cnix-store, here, hspec, hspec-discover, http-client + , http-client-tls, http-conduit, http-types, lzma-conduit , megaparsec, memory, mmorph, netrc, nix, optparse-applicative , process, protolude, resourcet, retry, safe-exceptions, servant , servant-auth, servant-auth-client, servant-client @@ -49545,21 +49825,20 @@ self: { }: mkDerivation { pname = "cachix"; - version = "0.6.0"; - sha256 = "1ay3k2npnplvgc44vn3zcyd5rgyfigvij4zil3nwrpdi0psd76nl"; + version = "0.6.1"; + sha256 = "0fgm7035ahlgl3vbk0lqf3l07wagsykmw9z0pkzqqcwh1wlv1np7"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ async base base64-bytestring bytestring cachix-api concurrent-extra conduit conduit-extra containers cookie cryptonite dhall directory - ed25519 filepath fsnotify here http-client http-client-tls - http-conduit http-types inline-c inline-c-cpp lzma-conduit - megaparsec memory mmorph netrc optparse-applicative process - protolude resourcet retry safe-exceptions servant servant-auth + ed25519 filepath fsnotify hercules-ci-cnix-store here http-client + http-client-tls http-conduit http-types lzma-conduit megaparsec + memory mmorph netrc optparse-applicative process protolude + resourcet retry safe-exceptions servant servant-auth servant-auth-client servant-client servant-client-core servant-conduit stm text unix uri-bytestring vector versions ]; - librarySystemDepends = [ boost ]; libraryPkgconfigDepends = [ nix ]; executableHaskellDepends = [ base cachix-api ]; executableToolDepends = [ hspec-discover ]; @@ -49569,7 +49848,8 @@ self: { ]; description = "Command line client for Nix binary cache hosting https://cachix.org"; license = lib.licenses.asl20; - }) {inherit (pkgs) boost; inherit (pkgs) nix;}; + maintainers = with lib.maintainers; [ domenkozar ]; + }) {inherit (pkgs) nix;}; "cachix-api" = callPackage ({ mkDerivation, aeson, base, base16-bytestring, bytestring @@ -49600,6 +49880,7 @@ self: { testToolDepends = [ hspec-discover ]; description = "Servant HTTP API specification for https://cachix.org"; license = lib.licenses.asl20; + maintainers = with lib.maintainers; [ domenkozar ]; }) {}; "cacophony" = callPackage @@ -49893,25 +50174,25 @@ self: { ({ mkDerivation, aeson, async, base, bytestring, calamity-commands , colour, concurrent-extra, connection, containers , data-default-class, data-flags, deepseq, deque, df1, di-core - , di-polysemy, exceptions, fmt, focus, generic-lens, hashable + , di-polysemy, exceptions, focus, generic-lens, hashable , http-api-data, http-client, http-date, http-types, lens , lens-aeson, megaparsec, mime-types, mtl, polysemy - , polysemy-plugin, reflection, req, safe-exceptions, scientific - , stm, stm-chans, stm-containers, text, text-show, time, tls - , typerep-map, unagi-chan, unboxing-vector, unordered-containers - , vector, websockets, x509-system + , polysemy-plugin, PyF, reflection, req, safe-exceptions + , scientific, stm, stm-chans, stm-containers, text, text-show, time + , tls, typerep-map, unagi-chan, unboxing-vector + , unordered-containers, vector, websockets, x509-system }: mkDerivation { pname = "calamity"; - version = "0.1.30.1"; - sha256 = "1qxag4vdxn2s3ijkr9lz5djafnwi7c6vj4q9b5z5p41ldvsil3l7"; + version = "0.1.30.2"; + sha256 = "0i0v8cb0a3mbkrb3liw60gb7zflnps5w04a6nx5aynini7mpwanj"; libraryHaskellDepends = [ aeson async base bytestring calamity-commands colour concurrent-extra connection containers data-default-class - data-flags deepseq deque df1 di-core di-polysemy exceptions fmt - focus generic-lens hashable http-api-data http-client http-date + data-flags deepseq deque df1 di-core di-polysemy exceptions focus + generic-lens hashable http-api-data http-client http-date http-types lens lens-aeson megaparsec mime-types mtl polysemy - polysemy-plugin reflection req safe-exceptions scientific stm + polysemy-plugin PyF reflection req safe-exceptions scientific stm stm-chans stm-containers text text-show time tls typerep-map unagi-chan unboxing-vector unordered-containers vector websockets x509-system @@ -49928,14 +50209,15 @@ self: { }: mkDerivation { pname = "calamity-commands"; - version = "0.1.2.0"; - sha256 = "1qm55aikpc1645bzks90r88f317rz5mzwv7grrs9dr37hmy3sl65"; + version = "0.1.3.0"; + sha256 = "0vhv63vapjc51hx6g9mjr5vgxlsfkss828wxcfjf5jd98qdv96dj"; libraryHaskellDepends = [ base generic-lens lens megaparsec polysemy polysemy-plugin text text-show unordered-containers ]; description = "A library for declaring, parsing, and invoking text-input based commands"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; }) {}; "calc" = callPackage @@ -50227,29 +50509,31 @@ self: { ({ mkDerivation, base, base32, bytestring, cereal, constraints , containers, crc, directory, dlist, doctest, filepath, hex-text , leb128-cereal, megaparsec, mtl, optparse-applicative - , prettyprinter, row-types, scientific, smallcheck, split, tasty - , tasty-hunit, tasty-rerun, tasty-smallcheck, template-haskell - , text, transformers, unordered-containers, vector + , parser-combinators, prettyprinter, row-types, scientific + , smallcheck, split, tasty, tasty-hunit, tasty-quickcheck + , tasty-rerun, tasty-smallcheck, template-haskell, text + , transformers, unordered-containers, vector }: mkDerivation { pname = "candid"; - version = "0.1"; - sha256 = "0mg7h936if93wdrhnri07530rnz7mnwlz5hpj1qp4bcwknsjs3b4"; + version = "0.2"; + sha256 = "0cif618n6m9cvlcvr7hk3gnypv2vxaz1qaa63jrxakmkcr1lm028"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base base32 bytestring cereal constraints containers crc dlist - hex-text leb128-cereal megaparsec mtl prettyprinter row-types - scientific split template-haskell text transformers - unordered-containers vector + hex-text leb128-cereal megaparsec mtl parser-combinators + prettyprinter row-types scientific split template-haskell text + transformers unordered-containers vector ]; executableHaskellDepends = [ base bytestring hex-text optparse-applicative prettyprinter text ]; testHaskellDepends = [ base bytestring directory doctest filepath leb128-cereal - prettyprinter row-types smallcheck tasty tasty-hunit tasty-rerun - tasty-smallcheck template-haskell text unordered-containers vector + prettyprinter row-types smallcheck tasty tasty-hunit + tasty-quickcheck tasty-rerun tasty-smallcheck template-haskell text + unordered-containers vector ]; description = "Candid integration"; license = lib.licenses.asl20; @@ -50526,6 +50810,8 @@ self: { ]; description = "OTP-like supervision trees in Haskell"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "capnp" = callPackage @@ -52115,24 +52401,21 @@ self: { "cdar-mBound" = callPackage ({ mkDerivation, base, containers, criterion, deepseq, integer-gmp - , parallel, QuickCheck, smallcheck, tasty, tasty-hunit - , tasty-quickcheck, tasty-smallcheck + , smallcheck, tasty, tasty-hunit, tasty-quickcheck + , tasty-smallcheck }: mkDerivation { pname = "cdar-mBound"; - version = "0.1.0.1"; - sha256 = "1a31rjs1if69987xi15qpyl2m21qscsxpyrq4jhfk3j87ilpx5zg"; + version = "0.1.0.4"; + sha256 = "1p7ri7vfvj3ym0038aq12szs6jgdkq8a4730i67appv9lmxgycfn"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base containers deepseq integer-gmp ]; - executableHaskellDepends = [ base containers deepseq integer-gmp ]; + executableHaskellDepends = [ base ]; testHaskellDepends = [ - base containers deepseq integer-gmp QuickCheck smallcheck tasty - tasty-hunit tasty-quickcheck tasty-smallcheck - ]; - benchmarkHaskellDepends = [ - base containers criterion deepseq integer-gmp parallel + base smallcheck tasty tasty-hunit tasty-quickcheck tasty-smallcheck ]; + benchmarkHaskellDepends = [ base criterion ]; description = "Exact real arithmetic using Centred Dyadic Approximations"; license = lib.licenses.bsd3; }) {}; @@ -53292,6 +53575,7 @@ self: { ]; description = "A library of simple NLP algorithms"; license = lib.licenses.bsd3; + maintainers = with lib.maintainers; [ sternenseemann ]; }) {}; "chatty" = callPackage @@ -53445,6 +53729,17 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; + "check-cfg-ambiguity" = callPackage + ({ mkDerivation, base, containers }: + mkDerivation { + pname = "check-cfg-ambiguity"; + version = "0.0.0.1"; + sha256 = "1qdg707a8yq61s5rs677yc8wp00sxdrf4vpr2r3c98q2psbkxl1n"; + libraryHaskellDepends = [ base containers ]; + description = "Checks context free grammar for ambiguity using brute force up to given limit"; + license = lib.licenses.bsd3; + }) {}; + "check-email" = callPackage ({ mkDerivation, base, bytestring, email-validate, resolv }: mkDerivation { @@ -53621,32 +53916,40 @@ self: { "chessIO" = callPackage ({ mkDerivation, attoparsec, base, binary, brick, bytestring - , containers, directory, extra, file-embed, filepath, haskeline - , megaparsec, microlens, microlens-th, MonadRandom, mtl, o-clock - , optparse-applicative, parallel, prettyprinter, process, random - , rosezipper, stm, text, time, unordered-containers, vector, vty + , containers, deepseq, directory, extra, file-embed, filepath + , hashable, haskeline, lens, megaparsec, MonadRandom + , mono-traversable, mtl, o-clock, optparse-applicative, parallel + , prettyprinter, process, random, rosezipper, stm, template-haskell + , text, th-lift-instances, time, unordered-containers, vector + , vector-binary-instances, vector-instances, vty }: mkDerivation { pname = "chessIO"; - version = "0.6.1.1"; - sha256 = "0fnbbxsnfb53pcmqs8bhszbd36d44gn9wz0j029yhfh3i1fy40yy"; + version = "0.7.0.0"; + sha256 = "1jb1c702c58g0pkk43g1mp7clm0wbkq993j880v3p7cxbyj5n9bh"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - attoparsec base binary bytestring containers extra file-embed - megaparsec MonadRandom o-clock prettyprinter process random stm - text unordered-containers vector + attoparsec base binary bytestring containers deepseq extra + file-embed hashable lens megaparsec MonadRandom mono-traversable + o-clock prettyprinter process random stm template-haskell text + th-lift-instances unordered-containers vector + vector-binary-instances vector-instances ]; executableHaskellDepends = [ - attoparsec base binary brick bytestring containers extra file-embed - filepath haskeline megaparsec microlens microlens-th MonadRandom - mtl o-clock optparse-applicative prettyprinter process random - rosezipper stm text time unordered-containers vector vty + attoparsec base binary brick bytestring containers deepseq extra + file-embed filepath hashable haskeline lens megaparsec MonadRandom + mono-traversable mtl o-clock optparse-applicative prettyprinter + process random rosezipper stm template-haskell text + th-lift-instances time unordered-containers vector + vector-binary-instances vector-instances vty ]; testHaskellDepends = [ - attoparsec base binary bytestring containers directory extra - file-embed megaparsec MonadRandom o-clock parallel prettyprinter - process random stm text time unordered-containers vector + attoparsec base binary bytestring containers deepseq directory + extra file-embed hashable lens megaparsec MonadRandom + mono-traversable o-clock parallel prettyprinter process random stm + template-haskell text th-lift-instances time unordered-containers + vector vector-binary-instances vector-instances ]; description = "Basic chess library"; license = lib.licenses.bsd3; @@ -54674,8 +54977,8 @@ self: { }: mkDerivation { pname = "circular"; - version = "0.3.1.1"; - sha256 = "0m3hw2w9hrxz7qi4vcqfbvqck6k7rzwv49r3il0i69xkxzr1dcgk"; + version = "0.4.0.0"; + sha256 = "1542z19mf0ck3x8n62slw88rbmqy8dgwjlsz145a0i8lb8f79kn1"; libraryHaskellDepends = [ aeson base primitive vector ]; testHaskellDepends = [ aeson base hspec primitive QuickCheck quickcheck-instances vector @@ -54751,32 +55054,6 @@ self: { }) {}; "citeproc" = callPackage - ({ mkDerivation, aeson, attoparsec, base, bytestring - , case-insensitive, containers, data-default, Diff, directory - , file-embed, filepath, mtl, pandoc-types, pretty, rfc5051, safe - , scientific, text, timeit, transformers, uniplate, vector - , xml-conduit - }: - mkDerivation { - pname = "citeproc"; - version = "0.3.0.9"; - sha256 = "0ky4j6nbn6yp3mny1m045n40jfvbr1iiylcf51hsi228y4m5za9s"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - aeson attoparsec base bytestring case-insensitive containers - data-default file-embed filepath pandoc-types rfc5051 safe - scientific text transformers uniplate vector xml-conduit - ]; - testHaskellDepends = [ - aeson base bytestring containers Diff directory filepath mtl pretty - text timeit transformers - ]; - description = "Generates citations and bibliography from CSL styles"; - license = lib.licenses.bsd2; - }) {}; - - "citeproc_0_4" = callPackage ({ mkDerivation, aeson, attoparsec, base, bytestring , case-insensitive, containers, data-default, Diff, directory , file-embed, filepath, mtl, pandoc-types, pretty, safe, scientific @@ -54785,8 +55062,8 @@ self: { }: mkDerivation { pname = "citeproc"; - version = "0.4"; - sha256 = "0ca6xyv0pa0w10pzn7zmpvg6583xjs8ffj16ykkrw9gjd4nlginh"; + version = "0.4.0.1"; + sha256 = "13hgbcbr7jbyfbxp8fsc43c2wq4fhlbxzqwh1plfkdi5n9bif1lv"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -54800,7 +55077,6 @@ self: { ]; description = "Generates citations and bibliography from CSL styles"; license = lib.licenses.bsd2; - hydraPlatforms = lib.platforms.none; }) {}; "citeproc-hs" = callPackage @@ -55141,37 +55417,6 @@ self: { }) {}; "clash-ghc" = callPackage - ({ mkDerivation, array, base, bifunctors, bytestring, Cabal - , clash-lib, clash-prelude, concurrent-supply, containers, deepseq - , directory, exceptions, extra, filepath, ghc, ghc-boot, ghc-prim - , ghc-typelits-extra, ghc-typelits-knownnat - , ghc-typelits-natnormalise, ghci, hashable, haskeline, integer-gmp - , lens, mtl, primitive, process, reflection, split - , template-haskell, text, time, transformers, uniplate, unix - , unordered-containers, utf8-string, vector - }: - mkDerivation { - pname = "clash-ghc"; - version = "1.4.1"; - sha256 = "0brfhgdb5ilrm4rxx8hsjsrzrj0lxppsd1g1k7m4jrdk7xp1mnlk"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - array base bifunctors bytestring Cabal clash-lib clash-prelude - concurrent-supply containers deepseq directory exceptions extra - filepath ghc ghc-boot ghc-prim ghc-typelits-extra - ghc-typelits-knownnat ghc-typelits-natnormalise ghci hashable - haskeline integer-gmp lens mtl primitive process reflection split - template-haskell text time transformers uniplate unix - unordered-containers utf8-string vector - ]; - executableHaskellDepends = [ base ]; - description = "Clash: a functional hardware description language - GHC frontend"; - license = lib.licenses.bsd2; - hydraPlatforms = lib.platforms.none; - }) {}; - - "clash-ghc_1_4_2" = callPackage ({ mkDerivation, array, base, bifunctors, bytestring, Cabal , clash-lib, clash-prelude, concurrent-supply, containers, deepseq , directory, exceptions, extra, filepath, ghc, ghc-boot, ghc-prim @@ -55203,49 +55448,6 @@ self: { }) {}; "clash-lib" = callPackage - ({ mkDerivation, aeson, aeson-pretty, ansi-terminal, array - , attoparsec, base, base16-bytestring, binary, bytestring - , clash-prelude, concurrent-supply, containers, cryptohash-sha256 - , data-binary-ieee754, data-default, deepseq, directory, dlist - , errors, exceptions, extra, filepath, ghc, ghc-boot-th - , ghc-typelits-knownnat, hashable, haskell-src-exts - , haskell-src-meta, hint, integer-gmp, interpolate, lens, mtl - , ordered-containers, parsers, pretty-show, prettyprinter - , primitive, process, quickcheck-text, reducers, tasty, tasty-hunit - , tasty-quickcheck, template-haskell, temporary, terminal-size - , text, text-show, time, transformers, trifecta - , unordered-containers, utf8-string, vector - , vector-binary-instances - }: - mkDerivation { - pname = "clash-lib"; - version = "1.4.1"; - sha256 = "1gg2snjfhhclfmyz07l5hddn8pfh9k4l4xjba1bx5php76kyiz0v"; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ - aeson aeson-pretty ansi-terminal array attoparsec base - base16-bytestring binary bytestring clash-prelude concurrent-supply - containers cryptohash-sha256 data-binary-ieee754 data-default - deepseq directory dlist errors exceptions extra filepath ghc - ghc-boot-th hashable haskell-src-meta hint integer-gmp interpolate - lens mtl ordered-containers parsers pretty-show prettyprinter - primitive process reducers template-haskell temporary terminal-size - text text-show time transformers trifecta unordered-containers - utf8-string vector vector-binary-instances - ]; - testHaskellDepends = [ - aeson aeson-pretty base base16-bytestring bytestring clash-prelude - concurrent-supply containers data-default deepseq ghc - ghc-typelits-knownnat haskell-src-exts lens pretty-show - quickcheck-text tasty tasty-hunit tasty-quickcheck template-haskell - text transformers unordered-containers - ]; - description = "Clash: a functional hardware description language - As a library"; - license = lib.licenses.bsd2; - hydraPlatforms = lib.platforms.none; - }) {}; - - "clash-lib_1_4_2" = callPackage ({ mkDerivation, aeson, aeson-pretty, ansi-terminal, array , attoparsec, base, base16-bytestring, binary, bytestring , clash-prelude, concurrent-supply, containers, cryptohash-sha256 @@ -55304,48 +55506,6 @@ self: { }) {}; "clash-prelude" = callPackage - ({ mkDerivation, array, arrows, base, bifunctors, binary - , bytestring, Cabal, cabal-doctest, constraints, containers - , criterion, data-binary-ieee754, data-default-class, deepseq - , doctest, ghc-prim, ghc-typelits-extra, ghc-typelits-knownnat - , ghc-typelits-natnormalise, half, hashable, hedgehog, hint - , integer-gmp, interpolate, lens, QuickCheck - , quickcheck-classes-base, recursion-schemes, reflection - , singletons, tasty, tasty-hedgehog, tasty-hunit, tasty-quickcheck - , tasty-th, template-haskell, text, text-show, th-abstraction - , th-lift, th-orphans, time, transformers, type-errors, uniplate - , vector - }: - mkDerivation { - pname = "clash-prelude"; - version = "1.4.1"; - sha256 = "12f3nlg6820grkjkljhyqgq43qc1x58akiy51gbxf6qp8k55akka"; - setupHaskellDepends = [ base Cabal cabal-doctest ]; - libraryHaskellDepends = [ - array arrows base bifunctors binary bytestring constraints - containers data-binary-ieee754 data-default-class deepseq ghc-prim - ghc-typelits-extra ghc-typelits-knownnat ghc-typelits-natnormalise - half hashable integer-gmp interpolate lens QuickCheck - recursion-schemes reflection singletons template-haskell text - text-show th-abstraction th-lift th-orphans time transformers - type-errors uniplate vector - ]; - testHaskellDepends = [ - base deepseq doctest ghc-typelits-extra ghc-typelits-knownnat - ghc-typelits-natnormalise hedgehog hint quickcheck-classes-base - tasty tasty-hedgehog tasty-hunit tasty-quickcheck tasty-th - template-haskell - ]; - benchmarkHaskellDepends = [ - base criterion deepseq template-haskell - ]; - description = "Clash: a functional hardware description language - Prelude library"; - license = lib.licenses.bsd2; - hydraPlatforms = lib.platforms.none; - broken = true; - }) {}; - - "clash-prelude_1_4_2" = callPackage ({ mkDerivation, array, arrows, base, bifunctors, binary , bytestring, Cabal, cabal-doctest, constraints, containers , criterion, data-binary-ieee754, data-default-class, deepseq @@ -56428,19 +56588,6 @@ self: { }) {}; "clock" = callPackage - ({ mkDerivation, base, criterion, tasty, tasty-quickcheck }: - mkDerivation { - pname = "clock"; - version = "0.8"; - sha256 = "0539w9bjw6xbfv9v6aq9hijszxqdnqhilwpbwpql1400ji95r8q8"; - libraryHaskellDepends = [ base ]; - testHaskellDepends = [ base tasty tasty-quickcheck ]; - benchmarkHaskellDepends = [ base criterion ]; - description = "High-resolution clock functions: monotonic, realtime, cputime"; - license = lib.licenses.bsd3; - }) {}; - - "clock_0_8_2" = callPackage ({ mkDerivation, base, criterion, tasty, tasty-quickcheck }: mkDerivation { pname = "clock"; @@ -56451,7 +56598,6 @@ self: { benchmarkHaskellDepends = [ base criterion ]; description = "High-resolution clock functions: monotonic, realtime, cputime"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "clock-extras" = callPackage @@ -56464,6 +56610,8 @@ self: { testHaskellDepends = [ base hspec ]; description = "A couple functions that probably should be in the 'clock' package"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "clocked" = callPackage @@ -56648,8 +56796,8 @@ self: { }: mkDerivation { pname = "cloudi"; - version = "2.0.1"; - sha256 = "0s01582a2iyibwhlkmmf4n9h0fs3w0sjip65j78c4hldc91ylvqd"; + version = "2.0.2"; + sha256 = "19m07hh2vrzgj6nalcm3fbrlxcv5c8ci6d9c9pihv82d444n37j6"; libraryHaskellDepends = [ array base binary bytestring containers network time unix zlib ]; @@ -57337,6 +57485,28 @@ self: { license = lib.licenses.publicDomain; }) {}; + "co-feldspar" = callPackage + ({ mkDerivation, array, base, constraints, containers + , data-default-class, exception-transformers, hardware-edsl + , imperative-edsl, language-c-quote, language-vhdl, minisat, mtl + , operational-alacarte, signals, simple-smt, srcloc, syntactic + , template-haskell + }: + mkDerivation { + pname = "co-feldspar"; + version = "0.1.0.1"; + sha256 = "03dr7vq3bn4rbafyr2i8m72am98kv2a75963403n68xwc3ifmq3z"; + libraryHaskellDepends = [ + array base constraints containers data-default-class + exception-transformers hardware-edsl imperative-edsl + language-c-quote language-vhdl minisat mtl operational-alacarte + signals simple-smt srcloc syntactic template-haskell + ]; + description = "Hardware software co-design Feldspar"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "co-log" = callPackage ({ mkDerivation, ansi-terminal, base, bytestring, chronos , co-log-core, containers, contravariant, directory, filepath @@ -57518,8 +57688,8 @@ self: { }: mkDerivation { pname = "cobot-io"; - version = "0.1.3.19"; - sha256 = "1gs4q04iyzzfwij58bbmhz2app3gf4xj0dnd4x4bhkgwj7gmvf4m"; + version = "0.1.3.20"; + sha256 = "075s6rhzyldm5c9g27ljwhs8xyxghk8cpm2742l3h69j9y7v3xnc"; libraryHaskellDepends = [ array attoparsec base binary bytestring containers data-msgpack deepseq http-conduit hyraxAbif lens linear mtl split text vector @@ -57579,14 +57749,15 @@ self: { }: mkDerivation { pname = "code-conjure"; - version = "0.2.6"; - sha256 = "1nvzyxmgn2wwa3j3rf38jz1nhhldv9jgbb91r7v2m822rxhr5pwp"; + version = "0.3.6"; + sha256 = "01qgxzh9gnajpaqwbvk027y8q8zalxk3d9axxyq6l30mxgjjacsk"; libraryHaskellDepends = [ base express leancheck speculate template-haskell ]; testHaskellDepends = [ base express leancheck speculate ]; description = "conjure Haskell functions out of partial definitions"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "code-page" = callPackage @@ -57724,6 +57895,36 @@ self: { broken = true; }) {}; + "codeforces-cli" = callPackage + ({ mkDerivation, aeson, ansi-terminal, base, base16-bytestring + , bytestring, containers, cryptohash-sha512, directory, extra + , http-client, http-conduit, http-types, open-browser + , optparse-applicative, random, text, time, transformers + }: + mkDerivation { + pname = "codeforces-cli"; + version = "0.1.0"; + sha256 = "11hkmjkp3pbqn1x72yp5zi892hcnh1bq1j3f6iqhf727fblcyrn4"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + aeson ansi-terminal base base16-bytestring bytestring containers + cryptohash-sha512 directory extra http-client http-conduit + http-types open-browser optparse-applicative random text time + transformers + ]; + executableHaskellDepends = [ + aeson ansi-terminal base base16-bytestring bytestring containers + cryptohash-sha512 directory extra http-client http-conduit + http-types open-browser optparse-applicative random text time + transformers + ]; + description = "Command line interface to interact with Codeforces"; + license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "codemonitor" = callPackage ({ mkDerivation, base, cairo, containers, directory, filepath, gtk , haskell98, hinotify, MissingH, process, regex-posix, time @@ -58973,81 +59174,103 @@ self: { }) {}; "commonmark" = callPackage - ({ mkDerivation, base, bytestring, containers, criterion, parsec - , QuickCheck, tasty, tasty-hunit, tasty-quickcheck, text - , transformers + ({ mkDerivation, base, bytestring, containers, parsec, tasty + , tasty-bench, tasty-hunit, tasty-quickcheck, text, transformers + , unicode-transforms }: mkDerivation { pname = "commonmark"; - version = "0.1.1.4"; - sha256 = "0dpm110svgdf21lf5sfbzjcfryn0v6hhjcs8kkyf167kng2sclfn"; + version = "0.2"; + sha256 = "083xrmyxsgn6ivrxqgmjbqvv4k64n7a330pbf1n7xbsjqh78cg28"; libraryHaskellDepends = [ base bytestring containers parsec text transformers + unicode-transforms ]; testHaskellDepends = [ - base parsec QuickCheck tasty tasty-hunit tasty-quickcheck text - ]; - benchmarkHaskellDepends = [ - base bytestring containers criterion text transformers + base parsec tasty tasty-hunit tasty-quickcheck text + unicode-transforms ]; + benchmarkHaskellDepends = [ base tasty-bench text ]; description = "Pure Haskell commonmark parser"; license = lib.licenses.bsd3; }) {}; + "commonmark_0_2_1" = callPackage + ({ mkDerivation, base, bytestring, containers, parsec, tasty + , tasty-bench, tasty-hunit, tasty-quickcheck, text, transformers + , unicode-transforms + }: + mkDerivation { + pname = "commonmark"; + version = "0.2.1"; + sha256 = "1vba7v1zaqh811v3j4x42g7mhwvxwgzm997kq1kzd0njby14fq5b"; + libraryHaskellDepends = [ + base bytestring containers parsec text transformers + unicode-transforms + ]; + testHaskellDepends = [ + base parsec tasty tasty-hunit tasty-quickcheck text + unicode-transforms + ]; + benchmarkHaskellDepends = [ base tasty-bench text ]; + description = "Pure Haskell commonmark parser"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "commonmark-cli" = callPackage ({ mkDerivation, aeson, ansi-terminal, base, bytestring, commonmark , commonmark-extensions, commonmark-pandoc, containers, mtl - , pandoc-types, pretty-simple, text + , pandoc-types, text }: mkDerivation { pname = "commonmark-cli"; - version = "0.1.0.1"; - sha256 = "1k7s7wzphllfydki1ifzab6b4x865vwxg50xldqdar141425s84l"; + version = "0.2"; + sha256 = "1g3i01acaqfqiqkl5xyxvzrh0alfx3il4r4rcjs4ii1nwaljdg6j"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ aeson ansi-terminal base bytestring commonmark commonmark-extensions commonmark-pandoc containers mtl pandoc-types - pretty-simple text + text ]; description = "Command-line commonmark converter and highlighter"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "commonmark-extensions" = callPackage - ({ mkDerivation, base, bytestring, commonmark, containers - , criterion, emojis, parsec, QuickCheck, tasty, tasty-hunit - , tasty-quickcheck, text, transformers + ({ mkDerivation, base, commonmark, containers, emojis, filepath + , network-uri, parsec, tasty, tasty-bench, tasty-hunit, text + , transformers }: mkDerivation { pname = "commonmark-extensions"; - version = "0.2.0.4"; - sha256 = "166ywkh6vyyrrwq7ww68pwzdkwmhi23hjvw28769m010ksimz2wh"; + version = "0.2.1.2"; + sha256 = "1ky0j7086a8mqpg26j2nkrc5wfwiw5cd3h3jqncpy59vmj1prkx4"; libraryHaskellDepends = [ - base bytestring commonmark containers emojis parsec text + base commonmark containers emojis filepath network-uri parsec text transformers ]; testHaskellDepends = [ - base commonmark parsec QuickCheck tasty tasty-hunit - tasty-quickcheck text - ]; - benchmarkHaskellDepends = [ - base bytestring commonmark containers criterion text transformers + base commonmark parsec tasty tasty-hunit text ]; + benchmarkHaskellDepends = [ base commonmark tasty-bench text ]; description = "Pure Haskell commonmark parser"; license = lib.licenses.bsd3; }) {}; "commonmark-pandoc" = callPackage ({ mkDerivation, base, commonmark, commonmark-extensions - , containers, pandoc-types, text + , pandoc-types, text }: mkDerivation { pname = "commonmark-pandoc"; - version = "0.2.0.1"; - sha256 = "12s20s64qad3varxr9bxpvdzx3ajdw58ssmssj9rqqq8k2nlnqh3"; + version = "0.2.1"; + sha256 = "0i5qavci8j63d15i2c6cbm0b53kcjh7s4vxadfgf4vkp2sy1ybvw"; libraryHaskellDepends = [ - base commonmark commonmark-extensions containers pandoc-types text + base commonmark commonmark-extensions pandoc-types text ]; description = "Bridge between commonmark and pandoc AST"; license = lib.licenses.bsd3; @@ -59181,6 +59404,8 @@ self: { pname = "compact"; version = "0.2.0.0"; sha256 = "0xv24vd2h76928355rr8gzdbkyn2j17yf6wjyghnzw7qyhsbb9h3"; + revision = "1"; + editedCabalFile = "1013dkawaw3c6hvlfn9x584pq8z65fvbnp79dl6ll6r0a75rivvm"; libraryHaskellDepends = [ base binary bytestring ghc-compact ]; testHaskellDepends = [ base directory ]; description = "Non-GC'd, contiguous storage for immutable data structures"; @@ -62112,16 +62337,18 @@ self: { }) {}; "connections" = callPackage - ({ mkDerivation, base, containers, doctest, hedgehog }: + ({ mkDerivation, base, containers, doctest, extended-reals + , hedgehog, time + }: mkDerivation { pname = "connections"; - version = "0.3.0"; - sha256 = "0ias6f5nzd83i2x6823ypzp598d8rgp74wmhd4gk7slcyszgpj6l"; + version = "0.3.1"; + sha256 = "0candwv3sv6qk76a4dn3m64957462da1pyvixl8jazf0gvq1pp23"; isLibrary = true; isExecutable = true; - libraryHaskellDepends = [ base containers ]; + libraryHaskellDepends = [ base containers extended-reals time ]; executableHaskellDepends = [ base doctest ]; - testHaskellDepends = [ base hedgehog ]; + testHaskellDepends = [ base hedgehog time ]; description = "Orders, Galois connections, and lattices"; license = lib.licenses.bsd3; }) {}; @@ -62579,10 +62806,8 @@ self: { }: mkDerivation { pname = "consumers"; - version = "2.2.0.2"; - sha256 = "0nml5hn6n95ngy1qvj6w4rkwa8r6qax0nc2vgimk68bawv4z97qd"; - revision = "2"; - editedCabalFile = "0fa67waf0af62kpljdksm00lvh29vm1rddfpjvy5c7lcy2a9ll97"; + version = "2.2.0.4"; + sha256 = "0rssm2ygr395djjzkrzcq3vylc83k58flwcpqb4cb3w1id55ph5r"; libraryHaskellDepends = [ base containers exceptions extra hpqtypes lifted-base lifted-threads log-base monad-control monad-time mtl stm time @@ -62695,12 +62920,24 @@ self: { license = lib.licenses.bsd3; }) {}; + "containers-good-graph" = callPackage + ({ mkDerivation, array, base, containers, deepseq }: + mkDerivation { + pname = "containers-good-graph"; + version = "0.6.4.1"; + sha256 = "1bv4v8q9gi1fa46c3pqj0kyl28kbyn55i038d0fxqbi225pdhhan"; + libraryHaskellDepends = [ array base containers deepseq ]; + testHaskellDepends = [ array base containers deepseq ]; + description = "Data.Graph, but it doesn't suck!"; + license = lib.licenses.bsd3; + }) {}; + "containers-unicode-symbols" = callPackage ({ mkDerivation, base, base-unicode-symbols, containers }: mkDerivation { pname = "containers-unicode-symbols"; - version = "0.3.1.2"; - sha256 = "006znsrwz3sssvg53mail2xd98hq6y4l83140sd2fzyg4df25js7"; + version = "0.3.1.3"; + sha256 = "1qz404fjcc00c2zxphzrm1r8i9q3hd8h9lndhd9ddxy3cx3jw8r6"; libraryHaskellDepends = [ base base-unicode-symbols containers ]; description = "Unicode alternatives for common functions and operators"; license = lib.licenses.bsd3; @@ -62784,19 +63021,20 @@ self: { }) {}; "context-free-grammar" = callPackage - ({ mkDerivation, array, base, containers, control-monad-omega - , dlist, HUnit, mtl, pretty, QuickCheck, quickcheck-properties - , template-haskell, test-framework, test-framework-hunit - , test-framework-quickcheck2 + ({ mkDerivation, alex, array, base, containers, control-monad-omega + , dlist, happy, HUnit, mtl, pretty, QuickCheck + , quickcheck-properties, semigroups, template-haskell + , test-framework, test-framework-hunit, test-framework-quickcheck2 }: mkDerivation { pname = "context-free-grammar"; - version = "0.1.0"; - sha256 = "11s6v8h39iq0wy4p4y8cwpr8fjhphql07s38rgbm8qsq1hj9f3a1"; + version = "0.1.1"; + sha256 = "15xsm8v157jpz2v98lry7sr77nwk0785mmj3zdb21ajqnkccyb14"; libraryHaskellDepends = [ array base containers control-monad-omega dlist mtl pretty - template-haskell + semigroups template-haskell ]; + libraryToolDepends = [ alex happy ]; testHaskellDepends = [ base containers HUnit pretty QuickCheck quickcheck-properties template-haskell test-framework test-framework-hunit @@ -63003,13 +63241,11 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "contra-tracer"; - version = "0.1.0.0"; - sha256 = "146g43sqa23n1qg100jvz5m1jcjfxx4rxzmc8559b6apys9ys4br"; - revision = "1"; - editedCabalFile = "1r3rnxlbvfirj4n2vwysh7zkfdwlx3x4p9yjd32hpr3vdikgpvds"; + version = "0.2.0.0"; + sha256 = "1rb2fal2rn02qnp28dsvq3r94b72jkqrp2s1lryhmrdj23jc3swy"; libraryHaskellDepends = [ base ]; description = "Arrow and contravariant tracers"; - license = lib.licenses.bsd3; + license = lib.licenses.asl20; }) {}; "contracheck-applicative" = callPackage @@ -63921,6 +64157,8 @@ self: { librarySystemDepends = [ rocksdb ]; description = "Launches CoreNLP and parses the JSON output"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {inherit (pkgs) rocksdb;}; "cornea" = callPackage @@ -64438,8 +64676,8 @@ self: { ({ mkDerivation, base, containers, directory, parallel }: mkDerivation { pname = "cpsa"; - version = "3.6.6"; - sha256 = "1mg85yjx4fjsnzfmbz0gh78agis44nqqmnc8rwdqkrp6vka1v9ks"; + version = "3.6.7"; + sha256 = "113w03i4a5xxxr9qc9zd2b00sp0m8lbf1mpgwf5zam3jjxzcq4x0"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -65525,6 +65763,8 @@ self: { ]; description = "Another bloated standard library"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "cruncher-types" = callPackage @@ -65719,8 +65959,8 @@ self: { pname = "crypto-enigma"; version = "0.1.1.6"; sha256 = "07qxrpwg9r2w2l0d2nrvn703vzsfhchznly93bnr2pfpbwj4iv2z"; - revision = "4"; - editedCabalFile = "0436kl0gsy0hj7dfrqmwz95q3k31af731q484yx2gj9zcma1h1vp"; + revision = "7"; + editedCabalFile = "1i5vlza8rl6a4wz4v3l61m6x7phbv1ly0di0cf3v3amz38x828qz"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base containers split text ]; @@ -66100,8 +66340,8 @@ self: { pname = "cryptohash-md5"; version = "0.11.100.1"; sha256 = "1y8q7s2bn4gdknw1wjikdnar2b5pgz3nv3220lxrlgpsf23x82vi"; - revision = "5"; - editedCabalFile = "1dxakry5p9dv9p9h617c0295plrfy2n5k13lsgp4gxwb6yzji9d4"; + revision = "6"; + editedCabalFile = "191nvffcrlyvr5dq99bbdxxl2qx44bla9adkhklyknf7ipqdd4yj"; libraryHaskellDepends = [ base bytestring ]; testHaskellDepends = [ base base16-bytestring bytestring pureMD5 tasty tasty-hunit @@ -66120,8 +66360,8 @@ self: { pname = "cryptohash-sha1"; version = "0.11.100.1"; sha256 = "1aqdxdhxhl9jldh951djpwxx8z7gzaqspxl7iwpl84i5ahrsyy9w"; - revision = "5"; - editedCabalFile = "1qay4qlvmwpllsqn1yd8gyraifx5ydl4chgg3dj4gzgmi36i9n0l"; + revision = "6"; + editedCabalFile = "10rpxrmqgwihmplczglwxf5q3l13z9j3kvi065z884y4dymmnkgc"; libraryHaskellDepends = [ base bytestring ]; testHaskellDepends = [ base base16-bytestring bytestring SHA tasty tasty-hunit @@ -66140,6 +66380,8 @@ self: { pname = "cryptohash-sha256"; version = "0.11.102.0"; sha256 = "0685s4hfighzywvvn05cfff5bl2xz3wq0pfncv6zca4iba3ykmla"; + revision = "1"; + editedCabalFile = "0v5ppc7r2lxbk49h1kwj4b5vyb1dw2fnppykvp5m9rm0p3vhlykr"; configureFlags = [ "-fuse-cbits" ]; isLibrary = true; isExecutable = true; @@ -66165,8 +66407,8 @@ self: { pname = "cryptohash-sha512"; version = "0.11.100.1"; sha256 = "1abi23dr3vzslkh0cx24cdn2gy88jjm4qr6rcm543ajyaywqns8h"; - revision = "5"; - editedCabalFile = "0ccvr3sp7mnllbd430l91b5ij70gg3g05nm9n6qaxzx2vaqdlyc2"; + revision = "6"; + editedCabalFile = "0q9c08qd8ssl428ifa3g30r0lp81a8afcpyv7yzqjp88ihgcnfa6"; libraryHaskellDepends = [ base bytestring ]; testHaskellDepends = [ base base16-bytestring bytestring SHA tasty tasty-hunit @@ -66269,30 +66511,6 @@ self: { }) {}; "cryptonite" = callPackage - ({ mkDerivation, base, basement, bytestring, deepseq, gauge - , ghc-prim, integer-gmp, memory, random, tasty, tasty-hunit - , tasty-kat, tasty-quickcheck - }: - mkDerivation { - pname = "cryptonite"; - version = "0.28"; - sha256 = "1nx568qv25dxhbii7lzf1hbv0dyz95z715mmxjnnrkgpwdm8ibbl"; - revision = "1"; - editedCabalFile = "0hqbpdsj1b4fgisr11a9gmin5r7bqr3f83wc2xxc18dr01xhrw7d"; - libraryHaskellDepends = [ - base basement bytestring deepseq ghc-prim integer-gmp memory - ]; - testHaskellDepends = [ - base bytestring memory tasty tasty-hunit tasty-kat tasty-quickcheck - ]; - benchmarkHaskellDepends = [ - base bytestring deepseq gauge memory random - ]; - description = "Cryptography Primitives sink"; - license = lib.licenses.bsd3; - }) {}; - - "cryptonite_0_29" = callPackage ({ mkDerivation, base, basement, bytestring, deepseq, gauge , ghc-prim, integer-gmp, memory, random, tasty, tasty-hunit , tasty-kat, tasty-quickcheck @@ -66312,7 +66530,6 @@ self: { ]; description = "Cryptography Primitives sink"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "cryptonite-conduit" = callPackage @@ -66641,15 +66858,15 @@ self: { }) {}; "css-easings" = callPackage - ({ mkDerivation, aeson, base, blaze-markup, data-default + ({ mkDerivation, aeson, base, blaze-markup, data-default, deepseq , QuickCheck, scientific, shakespeare, text }: mkDerivation { pname = "css-easings"; - version = "0.2.1.0"; - sha256 = "0mn3h7fqp4bs7rqjzc05k29man8i77dg1avcajdyysf84azklyrw"; + version = "0.2.2.0"; + sha256 = "0ks42vnvj5qffs5zwnplsrqjd9c90xxlcfgcqdhl0iw5fxxnfipj"; libraryHaskellDepends = [ - aeson base blaze-markup data-default QuickCheck scientific + aeson base blaze-markup data-default deepseq QuickCheck scientific shakespeare text ]; description = "Defining and manipulating css easing strings"; @@ -66666,8 +66883,8 @@ self: { }: mkDerivation { pname = "css-selectors"; - version = "0.4.0.2"; - sha256 = "1299xqp1ssxarz2i9wgzcyj4zmjry6cq02jb2a9n0vw61gw6z5g4"; + version = "0.4.0.3"; + sha256 = "1jz7s5lpfgs6axzkmwp2is1mhsn8jsb52ahxv8my07lx0yvy1g7v"; libraryHaskellDepends = [ aeson array base binary blaze-markup bytestring data-default Decimal hashable QuickCheck shakespeare template-haskell text zlib @@ -66702,6 +66919,8 @@ self: { ]; description = "High-performance CSS tokenizer and serializer"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "css-text" = callPackage @@ -67991,8 +68210,8 @@ self: { }: mkDerivation { pname = "darcs"; - version = "2.16.3"; - sha256 = "1bf11ndz6k7fx9bb31l4l6dqfkrld3gxsrrqggcg7d57wa3yw9c9"; + version = "2.16.4"; + sha256 = "07dygwh6p4fsrlgxmq6r7yvxmf4n2y04izzd30jzqgs0pi9645p4"; configureFlags = [ "-fforce-char8-encoding" "-flibrary" ]; isLibrary = true; isExecutable = true; @@ -72919,8 +73138,8 @@ self: { ({ mkDerivation, aeson, base, bytestring }: mkDerivation { pname = "deriving-aeson"; - version = "0.2.6.1"; - sha256 = "014f3jsaiwqkz2l0jap8shwq3rdn1hq14ahmq0hm3l4c98vznjra"; + version = "0.2.7"; + sha256 = "02mx8z1cgqn9wgwcp94am2g655hhn7sn12sikmm8jhbldnyv3ziz"; libraryHaskellDepends = [ aeson base ]; testHaskellDepends = [ aeson base bytestring ]; description = "Type driven generic aeson instance customisation"; @@ -72962,6 +73181,21 @@ self: { license = lib.licenses.bsd3; }) {}; + "deriving-trans" = callPackage + ({ mkDerivation, base, lifted-base, monad-control, mtl + , transformers, transformers-base + }: + mkDerivation { + pname = "deriving-trans"; + version = "0.1.0.0"; + sha256 = "1yphl0wjp67b7hc3ys6snlvzk67by070p5vfmwcv7ic688vh1dw4"; + libraryHaskellDepends = [ + base lifted-base monad-control mtl transformers transformers-base + ]; + description = "Derive transformer type classes with DerivingVia"; + license = lib.licenses.bsd3; + }) {}; + "derp" = callPackage ({ mkDerivation, base, containers }: mkDerivation { @@ -73455,7 +73689,7 @@ self: { maintainers = with lib.maintainers; [ Gabriel439 ]; }) {}; - "dhall" = callPackage + "dhall_1_38_1" = callPackage ({ mkDerivation, aeson, aeson-pretty, ansi-terminal, atomic-write , base, bytestring, case-insensitive, cborg, cborg-json, containers , contravariant, cryptonite, data-fix, deepseq, Diff, directory @@ -73509,6 +73743,62 @@ self: { doCheck = false; description = "A configuration language guaranteed to terminate"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + maintainers = with lib.maintainers; [ Gabriel439 ]; + }) {}; + + "dhall" = callPackage + ({ mkDerivation, aeson, aeson-pretty, ansi-terminal, atomic-write + , base, bytestring, case-insensitive, cborg, cborg-json, containers + , contravariant, cryptonite, data-fix, deepseq, Diff, directory + , doctest, dotgen, either, exceptions, filepath, foldl, gauge + , generic-random, half, hashable, haskeline, http-client + , http-client-tls, http-types, lens-family-core, megaparsec, memory + , mmorph, mockery, mtl, network-uri, optparse-applicative + , parser-combinators, parsers, pretty-simple, prettyprinter + , prettyprinter-ansi-terminal, profunctors, QuickCheck + , quickcheck-instances, repline, scientific, serialise + , special-values, spoon, tasty, tasty-expected-failure, tasty-hunit + , tasty-quickcheck, tasty-silver, template-haskell, text + , text-manipulate, th-lift-instances, transformers + , transformers-compat, turtle, unordered-containers, uri-encode + , vector + }: + mkDerivation { + pname = "dhall"; + version = "1.39.0"; + sha256 = "1by2d84fbckspczddl4npfsf89q6nprmbg0i5g8yr1psp0fpl4ab"; + isLibrary = true; + isExecutable = true; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + aeson aeson-pretty ansi-terminal atomic-write base bytestring + case-insensitive cborg cborg-json containers contravariant + cryptonite data-fix deepseq Diff directory dotgen either exceptions + filepath half hashable haskeline http-client http-client-tls + http-types lens-family-core megaparsec memory mmorph mtl + network-uri optparse-applicative parser-combinators parsers + pretty-simple prettyprinter prettyprinter-ansi-terminal profunctors + repline scientific serialise template-haskell text text-manipulate + th-lift-instances transformers transformers-compat + unordered-containers uri-encode vector + ]; + executableHaskellDepends = [ base ]; + testHaskellDepends = [ + base bytestring cborg containers data-fix deepseq directory doctest + either filepath foldl generic-random http-client http-client-tls + lens-family-core megaparsec mockery prettyprinter QuickCheck + quickcheck-instances scientific serialise special-values spoon + tasty tasty-expected-failure tasty-hunit tasty-quickcheck + tasty-silver template-haskell text transformers turtle + unordered-containers vector + ]; + benchmarkHaskellDepends = [ + base bytestring containers directory gauge text + ]; + doCheck = false; + description = "A configuration language guaranteed to terminate"; + license = lib.licenses.bsd3; maintainers = with lib.maintainers; [ Gabriel439 ]; }) {}; @@ -73518,10 +73808,8 @@ self: { }: mkDerivation { pname = "dhall-bash"; - version = "1.0.36"; - sha256 = "0hg45xjl1pcla9xbds40qrxcx2h6b4ysw8kbx8hpnaqaazr2jrw0"; - revision = "1"; - editedCabalFile = "1jc74gydr3yx01xp1a69a3g9mbfqyzsmv1053xm51bcxxv6p6z9d"; + version = "1.0.37"; + sha256 = "0gm6zamh8kgrc2d00cjf2ijb49ic3z6rlk0ngmig8hckmsy63w1d"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -73557,17 +73845,15 @@ self: { "dhall-docs" = callPackage ({ mkDerivation, base, bytestring, containers, cryptonite, dhall - , directory, doctest, file-embed, filepath, foldl, lens-family-core - , lucid, megaparsec, memory, mmark, mtl, optparse-applicative, path - , path-io, pretty, prettyprinter, tasty, tasty-hunit, tasty-silver - , text, transformers, turtle + , directory, doctest, file-embed, filepath, foldl, hashable + , lens-family-core, lucid, megaparsec, memory, mmark, mtl + , optparse-applicative, path, path-io, pretty, prettyprinter, tasty + , tasty-hunit, tasty-silver, text, transformers, turtle }: mkDerivation { pname = "dhall-docs"; - version = "1.0.5"; - sha256 = "00s1vhwilnr6hvv56w98kc1md08lw6v80v8a7yhwrmg9qggwdc12"; - revision = "1"; - editedCabalFile = "0y8a02jxz5cap0q4b2106ck4av7haxqlv5vjhm0nmrsq10cl4nss"; + version = "1.0.6"; + sha256 = "004n8kh8riw67aqwp6z9199jwv2c9r1dbkg92s71vd9zc04wxljv"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -73579,7 +73865,8 @@ self: { executableHaskellDepends = [ base dhall ]; testHaskellDepends = [ base bytestring containers dhall directory doctest filepath foldl - path path-io pretty tasty tasty-hunit tasty-silver text turtle + hashable path path-io pretty tasty tasty-hunit tasty-silver text + turtle ]; description = "Generate HTML docs from a dhall package"; license = lib.licenses.bsd3; @@ -73630,8 +73917,8 @@ self: { }: mkDerivation { pname = "dhall-json"; - version = "1.7.6"; - sha256 = "1fl5ngp1qh77qr27ax5009siy20cas6fm55776zhs82zb96sli0n"; + version = "1.7.7"; + sha256 = "163600cr04a5c9gjqg0846wwjp4wl61yhfg80zvsadkaq5zfzlll"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -73673,15 +73960,15 @@ self: { "dhall-lsp-server" = callPackage ({ mkDerivation, aeson, aeson-pretty, base, bytestring, containers , data-default, dhall, dhall-json, directory, doctest, filepath - , haskell-lsp, haskell-lsp-types, hslogger, lens, lsp-test + , haskell-lsp, haskell-lsp-types, hslogger, hspec, lens, lsp-test , megaparsec, mtl, network-uri, optparse-applicative, prettyprinter , QuickCheck, rope-utf16-splay, tasty, tasty-hspec, text , transformers, unordered-containers, uri-encode }: mkDerivation { pname = "dhall-lsp-server"; - version = "1.0.14"; - sha256 = "1jy80w3lr6c0hvn0525h5kn6fh9rj6ir942hdkilrzd9farg6qj9"; + version = "1.0.15"; + sha256 = "0bq6k92g22vdym9zyj95gx052yyzvgr1jv7yszlcj8p5angbxdqy"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -73692,7 +73979,7 @@ self: { ]; executableHaskellDepends = [ base optparse-applicative ]; testHaskellDepends = [ - base directory doctest filepath haskell-lsp-types lsp-test + base directory doctest filepath haskell-lsp-types hspec lsp-test QuickCheck tasty tasty-hspec text ]; description = "Language Server Protocol (LSP) server for Dhall"; @@ -73706,10 +73993,8 @@ self: { }: mkDerivation { pname = "dhall-nix"; - version = "1.1.20"; - sha256 = "14d9icvgmrphnbjjwlskh88p7vgphgb0xqd91p217bf2xhl9k2xd"; - revision = "2"; - editedCabalFile = "1w90jrkzmbv5nasafkkv0kyfmnqkngldx2lr891113h2mqbbr3wx"; + version = "1.1.21"; + sha256 = "0yqqjq8yqswcaiqrrgx37rlwvxgciwhvird34hsaq4fr3kbjgv4h"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -73732,10 +74017,8 @@ self: { }: mkDerivation { pname = "dhall-nixpkgs"; - version = "1.0.4"; - sha256 = "0yr7z17dvmr1zipk29fmzm46myxxsz514587n6a7h00c56dyvnc3"; - revision = "1"; - editedCabalFile = "1y08jxg51sbxx0i7ra45ii2v81plzf4hssmwlrw35l8n5gib1vcg"; + version = "1.0.5"; + sha256 = "10gvkw2rdmz7pgr9675xqnhkgi8pwjid77mwsriid81d703z2b6j"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -73755,8 +74038,8 @@ self: { }: mkDerivation { pname = "dhall-openapi"; - version = "1.0.0"; - sha256 = "1dg1hj8yfm08bzzirzg6cq26vkxv6i86rrf96a73pb1hpz3jjq7j"; + version = "1.0.1"; + sha256 = "1n34amb97dqpvz0s3mhqb46gjq1ix1gicsq700z6v6y7xssrgbz2"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -73775,19 +74058,16 @@ self: { "dhall-recursive-adt" = callPackage ({ mkDerivation, base, data-fix, dhall, either, hedgehog - , neat-interpolation, recursion-schemes, tasty, tasty-hedgehog - , tasty-hunit + , recursion-schemes, tasty, tasty-hedgehog, tasty-hunit, yasi }: mkDerivation { pname = "dhall-recursive-adt"; - version = "0.1.0.0"; - sha256 = "01wk6xsakbhsx14s59f0rj32mlccgxgc29a3n5d3b923yd5w64zm"; - revision = "1"; - editedCabalFile = "0gj4dsl70wjn4bpi62dqcqc9y9wwj2c9w6rai620ps4ykg36pygb"; + version = "0.1.0.1"; + sha256 = "09s3m86vflj5im2walab8d0wpvihsvxc5mzy55m10pfzr3gxsd11"; libraryHaskellDepends = [ base data-fix dhall recursion-schemes ]; testHaskellDepends = [ - base dhall either hedgehog neat-interpolation recursion-schemes - tasty tasty-hedgehog tasty-hunit + base dhall either hedgehog recursion-schemes tasty tasty-hedgehog + tasty-hunit yasi ]; description = "Convert recursive ADTs from and to Dhall"; license = lib.licenses.cc0; @@ -73851,8 +74131,8 @@ self: { }: mkDerivation { pname = "dhall-yaml"; - version = "1.2.6"; - sha256 = "0v6f513hxn382h4l8hyj9gxara3xdfcrldzri0i3yjvir62bkicm"; + version = "1.2.7"; + sha256 = "17fpxjlhmjnra92l8iv4k40bxbx1plmhkijf6axxkjyhfh0ax303"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -73889,6 +74169,7 @@ self: { description = "Parse a DHCP lease file"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "dhrun" = callPackage @@ -74018,6 +74299,7 @@ self: { ]; description = "DI logger wrapped for Polysemy"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; }) {}; "dia-base" = callPackage @@ -74067,6 +74349,7 @@ self: { doHaddock = false; description = "Embedded domain-specific language for declarative vector graphics"; license = lib.licenses.bsd3; + maintainers = with lib.maintainers; [ sternenseemann ]; }) {}; "diagrams-boolean" = callPackage @@ -74107,7 +74390,6 @@ self: { ]; description = "Braille diagrams with plain text"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "diagrams-builder" = callPackage @@ -74137,6 +74419,7 @@ self: { description = "hint-based build service for the diagrams graphics EDSL"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "diagrams-cairo" = callPackage @@ -74149,8 +74432,8 @@ self: { pname = "diagrams-cairo"; version = "1.4.1.1"; sha256 = "0vyd2yr55n7x71194i18lnbcshdjpnqw4qyq7vj5zx377rsz711k"; - revision = "1"; - editedCabalFile = "1jw499gd9kni1mk3h1hyaz5gz92ly5mi7sk8b9wabxcq5hdm9p94"; + revision = "2"; + editedCabalFile = "0ngbshqmb86sc9djmgkn3zc9l69bn3kdml7ld6qx36dsyq6mafq9"; libraryHaskellDepends = [ array base bytestring cairo colour containers data-default-class diagrams-core diagrams-lib filepath hashable JuicyPixels lens mtl @@ -74193,8 +74476,8 @@ self: { pname = "diagrams-contrib"; version = "1.4.4"; sha256 = "043jpr7lqg708lzmv6cqys7312lfdwnf8ijcnpl4jkbvcwl87c1m"; - revision = "1"; - editedCabalFile = "01m59vs4lagsyqcs3p4472i5b28n2jsr7naj30azrm8s197frbsl"; + revision = "2"; + editedCabalFile = "1mkpq356z7b2q6ifa4f1k7whsmhgn3hww8scacca0q2wnc8p4xjg"; libraryHaskellDepends = [ base circle-packing colour containers cubicbezier data-default data-default-class diagrams-core diagrams-lib diagrams-solve @@ -74380,6 +74663,40 @@ self: { license = lib.licenses.bsd3; }) {}; + "diagrams-lib_1_4_4" = callPackage + ({ mkDerivation, active, adjunctions, array, base, bytestring + , cereal, colour, containers, criterion, data-default-class + , deepseq, diagrams-core, diagrams-solve, directory, distributive + , dual-tree, exceptions, filepath, fingertree, fsnotify, hashable + , intervals, JuicyPixels, lens, linear, monoid-extras, mtl + , numeric-extras, optparse-applicative, process, profunctors + , QuickCheck, semigroups, tagged, tasty, tasty-hunit + , tasty-quickcheck, text, transformers, unordered-containers + }: + mkDerivation { + pname = "diagrams-lib"; + version = "1.4.4"; + sha256 = "09np7kj8si8kcb854f95a0cq392mgbxif8lnazbpfsa1k87d9vzy"; + revision = "1"; + editedCabalFile = "1c7kpnbvxwdcmk5znqyig3l6s986ppj168ck5v72dfbp8cjvwa8i"; + libraryHaskellDepends = [ + active adjunctions array base bytestring cereal colour containers + data-default-class diagrams-core diagrams-solve directory + distributive dual-tree exceptions filepath fingertree fsnotify + hashable intervals JuicyPixels lens linear monoid-extras mtl + optparse-applicative process profunctors semigroups tagged text + transformers unordered-containers + ]; + testHaskellDepends = [ + base deepseq diagrams-solve distributive lens numeric-extras + QuickCheck tasty tasty-hunit tasty-quickcheck + ]; + benchmarkHaskellDepends = [ base criterion diagrams-core ]; + description = "Embedded domain-specific language for declarative graphics"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "diagrams-pandoc" = callPackage ({ mkDerivation, base, diagrams-builder, diagrams-cairo , diagrams-core, diagrams-lib, diagrams-svg, directory, filepath @@ -74454,8 +74771,8 @@ self: { pname = "diagrams-postscript"; version = "1.5"; sha256 = "00j58mc84srjvrf21v6zjxxlbw6b8ahhn1jmbq697w8kw3cvygpa"; - revision = "1"; - editedCabalFile = "1cl7fmqiq9bng7va8kwlcxjmh76p1pm71c3p8242r552s10wqvb6"; + revision = "2"; + editedCabalFile = "0dyji1b8mcxaxwzgckkk3p3ji0prrp7rsin98f1hmyjlj3ih735b"; libraryHaskellDepends = [ base bytestring containers data-default-class diagrams-core diagrams-lib hashable lens monoid-extras mtl semigroups split @@ -74489,10 +74806,10 @@ self: { }: mkDerivation { pname = "diagrams-rasterific"; - version = "1.4.2"; - sha256 = "161rsy3g59n3sfrbfyvd4i4hszl0zm59w21b7pk6w88n0bk8gf2l"; + version = "1.4.2.1"; + sha256 = "09a1jnpc4kplg1yhv5kxhi0ph22m5xyr0vmnjv2c5wlz72c72z2z"; revision = "1"; - editedCabalFile = "0q2nzcdv7j654bk8c5fjz3whiz1l6cdy21n6ah53f1s7rlsbiz0g"; + editedCabalFile = "1nc12hm4qbj2lmbpk3a77cd46n5bcf20vwd075qj2vglbca2yl9b"; libraryHaskellDepends = [ base bytestring containers data-default-class diagrams-core diagrams-lib file-embed filepath FontyFruity hashable JuicyPixels @@ -74501,8 +74818,6 @@ self: { testHaskellDepends = [ base diagrams-core diagrams-lib ]; description = "Rasterific backend for diagrams"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; - broken = true; }) {}; "diagrams-reflex" = callPackage @@ -74564,8 +74879,8 @@ self: { pname = "diagrams-svg"; version = "1.4.3"; sha256 = "1ysv6cz0fngrndl4wjmw4hrdj2rik5fxa1dkxzwnlgf1xwpvxgk8"; - revision = "2"; - editedCabalFile = "07149rnzc8787mwh0aac5hfg9f41dxgs5wc9yv60fmgk9h5qnw1n"; + revision = "3"; + editedCabalFile = "19n3g9wvp2fj4dlz3ssyjqx1b6ihskg5s595x9z2c99bpbzyykkv"; libraryHaskellDepends = [ base base64-bytestring bytestring colour containers diagrams-core diagrams-lib filepath hashable JuicyPixels lens monoid-extras mtl @@ -75498,8 +75813,8 @@ self: { }: mkDerivation { pname = "diohsc"; - version = "0.1.6.1"; - sha256 = "15shc82ii68dzpa0j9dqi6iyhqa6zbr9g2007c1na42rxhm8fg7j"; + version = "0.1.7"; + sha256 = "0xhpj1dhcppvxv8558aai1azx8i3awv4adwl0vffzwj2kas23gjm"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -75725,14 +76040,12 @@ self: { broken = true; }) {}; - "directory_1_3_6_1" = callPackage + "directory_1_3_6_2" = callPackage ({ mkDerivation, base, filepath, time, unix }: mkDerivation { pname = "directory"; - version = "1.3.6.1"; - sha256 = "00cr2sshzjmn57rpvjj8wvgr60x2mk8c7w1nd40wxqs8s9xaa1bi"; - revision = "2"; - editedCabalFile = "14kwmqa1pf1bij7qang5aihw38ch7m5prsics0p0y72jkxx98y48"; + version = "1.3.6.2"; + sha256 = "0zgwx7bwhw0s5xc17hfn1ps3fxn9ihv174b2s7rz63flm8lsm0y3"; libraryHaskellDepends = [ base filepath time unix ]; testHaskellDepends = [ base filepath time unix ]; description = "Platform-agnostic library for filesystem operations"; @@ -75970,8 +76283,8 @@ self: { }: mkDerivation { pname = "discord-haskell"; - version = "1.8.6"; - sha256 = "0mmppadd1hmmdgbfjwzhy28kibzssbsnr5dxjiqf3hahmll74qjl"; + version = "1.8.8"; + sha256 = "0fvj9m59gsdicl061xlkqq8hrwsksyrysjdh5ijbv8gaql99k17v"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -75983,6 +76296,8 @@ self: { executableHaskellDepends = [ base text unliftio ]; description = "Write bots for Discord in Haskell"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "discord-hs" = callPackage @@ -76003,31 +76318,29 @@ self: { }) {}; "discord-register" = callPackage - ({ mkDerivation, base, calamity, dhall, di, di-polysemy - , generic-lens, hspec, hspec-megaparsec, megaparsec, polysemy - , polysemy-plugin, text, text-show, unboxing-vector - , unordered-containers, vector + ({ mkDerivation, aeson, base, binary, bytestring, calamity + , calamity-commands, data-flags, di, di-polysemy, generic-lens + , hashable, hedis, lens, megaparsec, polysemy, polysemy-plugin + , regex-tdfa, text, text-show, unboxing-vector + , unordered-containers }: mkDerivation { pname = "discord-register"; - version = "0.0.1"; - sha256 = "1crwbdkyg6k4777lcc7yi5n47xpsnvl3s1652n896k1hck7ckrr8"; + version = "0.0.2"; + sha256 = "01imq7m41g26x7prm223y6bagjwyzb3glwy41fg4kdd244pz02wf"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - base calamity dhall di di-polysemy generic-lens hspec - hspec-megaparsec megaparsec polysemy polysemy-plugin text text-show - unboxing-vector unordered-containers vector + aeson base binary bytestring calamity calamity-commands data-flags + di di-polysemy generic-lens hashable hedis lens megaparsec polysemy + polysemy-plugin regex-tdfa text text-show unboxing-vector + unordered-containers ]; executableHaskellDepends = [ - base calamity dhall di di-polysemy generic-lens hspec - hspec-megaparsec megaparsec polysemy polysemy-plugin text text-show - unboxing-vector unordered-containers vector - ]; - testHaskellDepends = [ - base calamity dhall di di-polysemy generic-lens hspec - hspec-megaparsec megaparsec polysemy polysemy-plugin text text-show - unboxing-vector unordered-containers vector + aeson base binary bytestring calamity calamity-commands data-flags + di di-polysemy generic-lens hashable hedis lens megaparsec polysemy + polysemy-plugin regex-tdfa text text-show unboxing-vector + unordered-containers ]; description = "Discord verification bot"; license = lib.licenses.mpl20; @@ -77204,18 +77517,6 @@ self: { }) {}; "dlist" = callPackage - ({ mkDerivation, base, Cabal, deepseq, QuickCheck }: - mkDerivation { - pname = "dlist"; - version = "0.8.0.8"; - sha256 = "0va9xk8g2iag24x042q3w6z77xdqd91112kh0piq8cwd0qccyabi"; - libraryHaskellDepends = [ base deepseq ]; - testHaskellDepends = [ base Cabal QuickCheck ]; - description = "Difference lists"; - license = lib.licenses.bsd3; - }) {}; - - "dlist_1_0" = callPackage ({ mkDerivation, base, deepseq, QuickCheck }: mkDerivation { pname = "dlist"; @@ -77225,7 +77526,6 @@ self: { testHaskellDepends = [ base QuickCheck ]; description = "Difference lists"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "dlist-instances" = callPackage @@ -77513,6 +77813,8 @@ self: { ]; description = "DigitalOcean Spaces API bindings"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "dobutok" = callPackage @@ -77969,8 +78271,8 @@ self: { }: mkDerivation { pname = "doctest"; - version = "0.16.3"; - sha256 = "1y1l7aa80qkib1z8lsizgg7fpfdmdwhxvi5m255a42jdkjgn5sfg"; + version = "0.17"; + sha256 = "0f0knggq6yjcznyri35fll619q5jr8vcsbiyvdiz4prkawhaa4pz"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -78072,8 +78374,8 @@ self: { ({ mkDerivation, base, doctest }: mkDerivation { pname = "doctest-driver-gen"; - version = "0.3.0.3"; - sha256 = "0vb062mznjpksrbsf2v599slgnm5jr6dq1frbxii19mcqxjbnzrj"; + version = "0.3.0.4"; + sha256 = "1fbqi4s4ajxhyv4a7nbh3v98limla0z8rfqlh02pwc1a90qpwy1a"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base ]; @@ -78376,8 +78678,8 @@ self: { }: mkDerivation { pname = "domain"; - version = "0.1"; - sha256 = "1lr97k14wc35myckknsv3vyximqfv5vq04f5kpd8167lk3vjahm2"; + version = "0.1.1.1"; + sha256 = "1vy789dv1lpha2bxvr0x1vk2vvgb9z43abkqi1rbj2vvirqsbr1n"; libraryHaskellDepends = [ attoparsec base bytestring domain-core foldl hashable parser-combinators template-haskell template-haskell-compat-v0208 @@ -78434,8 +78736,8 @@ self: { }: mkDerivation { pname = "domain-optics"; - version = "0.1"; - sha256 = "0nivzn3nw30n1wb0i2j9qzxfmqcyknc187z3rkfyz5a5y7iq7x4m"; + version = "0.1.0.1"; + sha256 = "1ypsnwy9rv9yldyc2v5w6q2az87dmj9dyalsmg7nnymaip4jm1dm"; libraryHaskellDepends = [ base domain-core optics-core template-haskell template-haskell-compat-v0208 text th-lego unordered-containers @@ -79143,8 +79445,8 @@ self: { ({ mkDerivation, base, ki, transformers, unagi-chan }: mkDerivation { pname = "drama"; - version = "0.3.0.0"; - sha256 = "17smzrvpaah2lcc2467dd61lns53q4n0bf0pl9glsv04j9kv2nl9"; + version = "0.4.0.0"; + sha256 = "15p8pac1xcl5iifv1g0bs09l99x6q8skid71wlyxh4g9j7hrgpdr"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base ki transformers unagi-chan ]; @@ -79721,6 +80023,24 @@ self: { }) {}; "dual-tree" = callPackage + ({ mkDerivation, base, monoid-extras, newtype-generics, QuickCheck + , semigroups, testing-feat + }: + mkDerivation { + pname = "dual-tree"; + version = "0.2.2.1"; + sha256 = "17kdfnf0df0z5pkiifxrlmyd1xd7hjjaazd2kzyajl0gd00vbszx"; + libraryHaskellDepends = [ + base monoid-extras newtype-generics semigroups + ]; + testHaskellDepends = [ + base monoid-extras QuickCheck semigroups testing-feat + ]; + description = "Rose trees with cached and accumulating monoidal annotations"; + license = lib.licenses.bsd3; + }) {}; + + "dual-tree_0_2_3_0" = callPackage ({ mkDerivation, base, monoid-extras, newtype-generics, QuickCheck , semigroups, testing-feat }: @@ -79736,6 +80056,7 @@ self: { ]; description = "Rose trees with cached and accumulating monoidal annotations"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "dualizer" = callPackage @@ -80395,6 +80716,33 @@ self: { broken = true; }) {}; + "dynamic-pipeline" = callPackage + ({ mkDerivation, async, base, bytestring, HList, hspec + , hspec-discover, lens, optparse-applicative, QuickCheck, relude + , trifecta, unagi-chan + }: + mkDerivation { + pname = "dynamic-pipeline"; + version = "0.1.0.5"; + sha256 = "0smj2fk7dj0kxfgs00n52bpkvrb4yx0h2bkwabjkag96a867f9gr"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + async base bytestring HList lens relude unagi-chan + ]; + executableHaskellDepends = [ + async base bytestring HList lens optparse-applicative relude + trifecta unagi-chan + ]; + testHaskellDepends = [ + async base bytestring HList hspec lens QuickCheck relude unagi-chan + ]; + testToolDepends = [ hspec-discover ]; + description = "Library Type Safe implementation of Dynamic Pipeline Paradigm (DPP)"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "dynamic-plot" = callPackage ({ mkDerivation, base, colour, colour-space, constrained-categories , containers, data-default, deepseq, diagrams-cairo, diagrams-core @@ -81479,6 +81827,31 @@ self: { broken = true; }) {}; + "effectful" = callPackage + ({ mkDerivation, base, containers, exceptions, freer-simple + , fused-effects, ghc-prim, lifted-async, lifted-base, monad-control + , mtl, polysemy, primitive, resourcet, tasty, tasty-bench + , tasty-hunit, transformers, transformers-base, unliftio + , unliftio-core + }: + mkDerivation { + pname = "effectful"; + version = "0.0.0.0"; + sha256 = "1k0cfryskdgqldsf7pan42bq6zc7n5xmm2j00sizdlxd0ssd9axd"; + libraryHaskellDepends = [ + base containers exceptions ghc-prim monad-control primitive + resourcet transformers transformers-base unliftio-core + ]; + testHaskellDepends = [ + base exceptions lifted-async lifted-base tasty tasty-hunit unliftio + ]; + benchmarkHaskellDepends = [ + base freer-simple fused-effects mtl polysemy tasty-bench + ]; + description = "A simple, yet powerful extensible effects library"; + license = lib.licenses.bsd3; + }) {}; + "effective-aspects" = callPackage ({ mkDerivation, base, Cabal, ghc-prim, hashtables, HUnit, mtl , QuickCheck, test-framework, test-framework-hunit @@ -81858,8 +82231,8 @@ self: { ({ mkDerivation, base, containers, doctest }: mkDerivation { pname = "either-list-functions"; - version = "0.0.4.4"; - sha256 = "1kh10iykk6gqzl78smrwv1zl8dcy0ns2raisx5qchcvrdgshzdiy"; + version = "0.0.4.5"; + sha256 = "1q77nq24sxig4xangcxzyg3dzm9yphj5w5l143q84am098hp0vkn"; libraryHaskellDepends = [ base containers ]; testHaskellDepends = [ base doctest ]; description = "Functions involving lists of Either"; @@ -82883,8 +83256,8 @@ self: { }: mkDerivation { pname = "elynx"; - version = "0.5.0.2"; - sha256 = "1hky4amw78ciblr6alcxp79dshsc5wqswp16hbqdry132xps9dw3"; + version = "0.5.1.1"; + sha256 = "1jh46yy7i45bym0cgvj4nik0a7yv82grncfmn3dk4rr70r9wvdwa"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -82901,8 +83274,8 @@ self: { }: mkDerivation { pname = "elynx-markov"; - version = "0.5.0.2"; - sha256 = "0wlcq3q26lgwixhsq1afz9i3phr2sncwc0r6m4adminh9m1zdr5z"; + version = "0.5.1.1"; + sha256 = "0j2xg8iszkf3m1xlmrkm6mq3mqnfnc11pbar288r5alva7ssl1vb"; libraryHaskellDepends = [ async attoparsec base bytestring containers elynx-seq hmatrix integration math-functions mwc-random primitive statistics vector @@ -82919,8 +83292,8 @@ self: { ({ mkDerivation, attoparsec, base, bytestring, hspec }: mkDerivation { pname = "elynx-nexus"; - version = "0.5.0.2"; - sha256 = "1y7ndj216w58s85bfgp4vg7zi1asj6br68k000hy4a8cchjprlp9"; + version = "0.5.1.1"; + sha256 = "1p5x2in4r63amb9ifrxdqb3b9bjrxy97gwij0p3hsh9h8p7wsijg"; libraryHaskellDepends = [ attoparsec base bytestring ]; testHaskellDepends = [ base hspec ]; description = "Import and export Nexus files"; @@ -82934,8 +83307,8 @@ self: { }: mkDerivation { pname = "elynx-seq"; - version = "0.5.0.2"; - sha256 = "11nl8gw05gvd6j7dflqzi21kixmm0jalpqv9x9f6bb7qwdv1xak2"; + version = "0.5.1.1"; + sha256 = "0cjm8i44i8zqkh7x5rwf0g45fji6k6mq6h47hiphybax6a16zaxb"; libraryHaskellDepends = [ aeson attoparsec base bytestring containers matrices mwc-random parallel primitive vector vector-th-unbox word8 @@ -82949,21 +83322,21 @@ self: { "elynx-tools" = callPackage ({ mkDerivation, aeson, attoparsec, base, base16-bytestring - , bytestring, cryptohash-sha256, deepseq, directory, fast-logger - , hmatrix, monad-control, monad-logger, mwc-random - , optparse-applicative, primitive, template-haskell, text, time - , transformers, transformers-base, vector, zlib + , bytestring, cryptohash-sha256, deepseq, directory, hmatrix + , monad-control, monad-logger, mwc-random, optparse-applicative + , primitive, template-haskell, text, time, transformers + , transformers-base, vector, zlib }: mkDerivation { pname = "elynx-tools"; - version = "0.5.0.2"; - sha256 = "1q62f0b0fk6g2a4w5bbbpldv0awk7cn2q544xcxplanpr3fmaj8v"; + version = "0.5.1.1"; + sha256 = "16cw9afpnczwrqhgyzy3vc7c6b9zx88ja94h34k2gi3960rfxf53"; libraryHaskellDepends = [ aeson attoparsec base base16-bytestring bytestring - cryptohash-sha256 deepseq directory fast-logger hmatrix - monad-control monad-logger mwc-random optparse-applicative - primitive template-haskell text time transformers transformers-base - vector zlib + cryptohash-sha256 deepseq directory hmatrix monad-control + monad-logger mwc-random optparse-applicative primitive + template-haskell text time transformers transformers-base vector + zlib ]; description = "Tools for ELynx"; license = lib.licenses.gpl3Plus; @@ -82977,8 +83350,8 @@ self: { }: mkDerivation { pname = "elynx-tree"; - version = "0.5.0.2"; - sha256 = "1ywqbc80hq4dprzrrq9gyi7h2624i2mgpd43pv045dldh7dqhygn"; + version = "0.5.1.1"; + sha256 = "0wjhj48jbyjvmydsa9wcppzlambm2r5pmd5wjfjn0k7s5sc3zf5k"; libraryHaskellDepends = [ aeson attoparsec base bytestring comonad containers deepseq double-conversion elynx-nexus math-functions mwc-random parallel @@ -83659,6 +84032,8 @@ self: { pname = "entropy"; version = "0.4.1.6"; sha256 = "0qmzz0zgad13zl0kjrxz6cxg8ckn2w8saas2a2j72vbafpzmkixd"; + revision = "1"; + editedCabalFile = "0jyyyn1cfi1cjisbgym90nw2vx2082ghvwg54ibnjzbii9aj7fj9"; setupHaskellDepends = [ base Cabal directory filepath process ]; libraryHaskellDepends = [ base bytestring unix ]; description = "A platform independent entropy source"; @@ -84095,6 +84470,7 @@ self: { ]; description = "An environmentally friendly way to deal with environment variables"; license = lib.licenses.bsd3; + maintainers = with lib.maintainers; [ sternenseemann ]; }) {}; "envy-extensible" = callPackage @@ -84345,8 +84721,8 @@ self: { pname = "equational-reasoning"; version = "0.7.0.0"; sha256 = "0l6gyq43byh6cy2pblb9a4qjy7w5k9maa97c076dxlsf53myj01h"; - revision = "1"; - editedCabalFile = "1a8dw9givg0przqrm33kkmff9r0fdv1ih6ik3dqa99ww71cc8q66"; + revision = "2"; + editedCabalFile = "0zlcd62kapcybli65w47mb1kg5fnyzgdnf7kr8y8qgslg0lidzpp"; libraryHaskellDepends = [ base containers template-haskell th-desugar void ]; @@ -84565,8 +84941,6 @@ self: { testToolDepends = [ hspec-discover ]; description = "Source code error pretty printing"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; - broken = true; }) {}; "errno" = callPackage @@ -85028,36 +85402,6 @@ self: { }) {}; "esqueleto" = callPackage - ({ mkDerivation, aeson, attoparsec, base, blaze-html, bytestring - , conduit, containers, exceptions, hspec, monad-logger, mtl, mysql - , mysql-simple, persistent, persistent-mysql, persistent-postgresql - , persistent-sqlite, persistent-template, postgresql-libpq - , postgresql-simple, resourcet, tagged, text, time, transformers - , unliftio, unordered-containers, vector - }: - mkDerivation { - pname = "esqueleto"; - version = "3.4.1.1"; - sha256 = "15355vc3ysqr4yd149xz7zm7iba7pb04p3yxgp1n6dxczwldjf43"; - revision = "1"; - editedCabalFile = "0rwj2cg7pkn4nwapyk9syb64f0qycq7kqwbpciwwq9xdviwcvqzk"; - libraryHaskellDepends = [ - aeson attoparsec base blaze-html bytestring conduit containers - monad-logger persistent resourcet tagged text time transformers - unliftio unordered-containers - ]; - testHaskellDepends = [ - aeson attoparsec base blaze-html bytestring conduit containers - exceptions hspec monad-logger mtl mysql mysql-simple persistent - persistent-mysql persistent-postgresql persistent-sqlite - persistent-template postgresql-libpq postgresql-simple resourcet - tagged text time transformers unliftio unordered-containers vector - ]; - description = "Type-safe EDSL for SQL queries on persistent backends"; - license = lib.licenses.bsd3; - }) {}; - - "esqueleto_3_4_2_1" = callPackage ({ mkDerivation, aeson, attoparsec, base, blaze-html, bytestring , conduit, containers, exceptions, hspec, monad-logger, mtl, mysql , mysql-simple, persistent, persistent-mysql, persistent-postgresql @@ -85067,10 +85411,8 @@ self: { }: mkDerivation { pname = "esqueleto"; - version = "3.4.2.1"; - sha256 = "0yh2fgk5rjphszn2prww190nsvw84j68js7wnd6p5iwynrw6ahxh"; - revision = "1"; - editedCabalFile = "0nsm17spkhsykizmpr29x8zq16ha6j0325r08ms675jn574ni2g1"; + version = "3.5.0.0"; + sha256 = "00mamdsm4yc8gdvb5zfnhnp7iqkg7h9fd5jgzrbdh9q7isyc6kiy"; libraryHaskellDepends = [ aeson attoparsec base blaze-html bytestring conduit containers monad-logger persistent resourcet tagged text time transformers @@ -85085,6 +85427,34 @@ self: { ]; description = "Type-safe EDSL for SQL queries on persistent backends"; license = lib.licenses.bsd3; + }) {}; + + "esqueleto_3_5_1_0" = callPackage + ({ mkDerivation, aeson, attoparsec, base, blaze-html, bytestring + , conduit, containers, exceptions, hspec, hspec-core, monad-logger + , mtl, mysql, mysql-simple, persistent, persistent-mysql + , persistent-postgresql, persistent-sqlite, postgresql-simple + , QuickCheck, resourcet, tagged, text, time, transformers, unliftio + , unordered-containers + }: + mkDerivation { + pname = "esqueleto"; + version = "3.5.1.0"; + sha256 = "1r77lym11gh53059b3hg5wyzb4ymaynk5awrmzgnwfkmx041sqp8"; + libraryHaskellDepends = [ + aeson attoparsec base blaze-html bytestring conduit containers + monad-logger persistent resourcet tagged text time transformers + unliftio unordered-containers + ]; + testHaskellDepends = [ + aeson attoparsec base blaze-html bytestring conduit containers + exceptions hspec hspec-core monad-logger mtl mysql mysql-simple + persistent persistent-mysql persistent-postgresql persistent-sqlite + postgresql-simple QuickCheck resourcet tagged text time + transformers unliftio unordered-containers + ]; + description = "Type-safe EDSL for SQL queries on persistent backends"; + license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; }) {}; @@ -86022,8 +86392,8 @@ self: { }: mkDerivation { pname = "eventlog2html"; - version = "0.9.0"; - sha256 = "1cjnkqdnk76839dl4dbpj3vzbkrjwgqryq2j3sgs9mmxfing7ahq"; + version = "0.9.1"; + sha256 = "17fp0q44lk3nkqzpilxlvzbr0b25girbh7j18yl6blcp5mcmq2cd"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -86346,8 +86716,8 @@ self: { }: mkDerivation { pname = "exact-real"; - version = "0.12.4.1"; - sha256 = "194qx4dq8c9w1nbr4vyalmvp0m1a0q1pxjckg59m7c3fsz9r88jg"; + version = "0.12.5"; + sha256 = "1xjj17h8a4sbja7f29xvasgzxzn58i2276ysqqkw8d5dsd5913lb"; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ base integer-gmp random ]; testHaskellDepends = [ @@ -87077,6 +87447,8 @@ self: { pname = "exp-extended"; version = "0.2"; sha256 = "14bz6wfzd8b51s09d2psg5hv5zq4f8lplgx0yvd3n0z704x3mcy6"; + revision = "1"; + editedCabalFile = "1kzrlr1j6xfm8r9j1iz9vp2c7x72gmmqzmki1ypxaawdzibyfysl"; libraryHaskellDepends = [ base ]; description = "floating point with extended exponent range"; license = lib.licenses.bsd3; @@ -87384,8 +87756,8 @@ self: { ({ mkDerivation, base, leancheck, template-haskell }: mkDerivation { pname = "express"; - version = "0.1.10"; - sha256 = "09ajf8ibcwxqbyrrz7yb84fpzfb7g54b1mz5q8w3dvk8rrdxaak1"; + version = "0.1.14"; + sha256 = "19sjh12sjpxhk7wg2b3abga7bpk6ckry19zi58imqmy8xbh6ds39"; libraryHaskellDepends = [ base template-haskell ]; testHaskellDepends = [ base leancheck ]; benchmarkHaskellDepends = [ base leancheck ]; @@ -87857,14 +88229,15 @@ self: { }: mkDerivation { pname = "extrapolate"; - version = "0.4.4"; - sha256 = "0indkjjahlh1isnal93w3iliy59azgdmi9lmdqz4jkbpd421zava"; + version = "0.4.6"; + sha256 = "0452b377ar95jshb5qdjcyxx54r707rxyxq0xkha55zxffp0dxq4"; libraryHaskellDepends = [ base express leancheck speculate template-haskell ]; testHaskellDepends = [ base express leancheck speculate ]; description = "generalize counter-examples of test properties"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "ez-couch" = callPackage @@ -88077,6 +88450,7 @@ self: { description = "Braid representations in Haskell"; license = lib.licenses.bsd2; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "fadno-xml" = callPackage @@ -88250,6 +88624,43 @@ self: { broken = true; }) {}; + "fakedata_1_0" = callPackage + ({ mkDerivation, attoparsec, base, bytestring, containers, deepseq + , directory, exceptions, fakedata-parser, filepath, gauge, hashable + , hspec, hspec-discover, QuickCheck, random, regex-tdfa + , string-random, template-haskell, text, time, transformers + , unordered-containers, vector, yaml + }: + mkDerivation { + pname = "fakedata"; + version = "1.0"; + sha256 = "1bbb90i6pm8ih1br81hwwz2bb2yvkx6fv44xkw0qv741n9a9rcz0"; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + attoparsec base bytestring containers directory exceptions + fakedata-parser filepath hashable QuickCheck random regex-tdfa + string-random template-haskell text time transformers + unordered-containers vector yaml + ]; + testHaskellDepends = [ + attoparsec base bytestring containers directory exceptions + fakedata-parser filepath hashable hspec QuickCheck random + regex-tdfa string-random template-haskell text time transformers + unordered-containers vector yaml + ]; + testToolDepends = [ hspec-discover ]; + benchmarkHaskellDepends = [ + attoparsec base bytestring containers deepseq directory exceptions + fakedata-parser filepath gauge hashable QuickCheck random + regex-tdfa string-random template-haskell text time transformers + unordered-containers vector yaml + ]; + description = "Library for producing fake data"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "fakedata-parser" = callPackage ({ mkDerivation, attoparsec, base, hspec, text }: mkDerivation { @@ -88320,20 +88731,20 @@ self: { "faktory" = callPackage ({ mkDerivation, aeson, aeson-casing, async, base, bytestring - , connection, cryptonite, hspec, markdown-unlit, megaparsec, memory - , mtl, network, random, safe-exceptions, scanner, semigroups, text - , time, unix, unordered-containers + , connection, cryptonite, errors, hspec, markdown-unlit, megaparsec + , memory, mtl, network, random, safe-exceptions, scanner + , semigroups, text, time, unix, unordered-containers }: mkDerivation { pname = "faktory"; - version = "1.0.2.3"; - sha256 = "1ppyj7avp7y5n0qgql1j73yc62szykhxm1j8nxv93hsijzi6p4a5"; + version = "1.0.3.1"; + sha256 = "0af9wsx3fl701an3bsp7daxa4hxv7pdj16y7cypj3cvdwav5wdsg"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson aeson-casing base bytestring connection cryptonite megaparsec - memory mtl network random safe-exceptions scanner semigroups text - time unix unordered-containers + aeson aeson-casing base bytestring connection cryptonite errors + megaparsec memory mtl network random safe-exceptions scanner + semigroups text time unix unordered-containers ]; executableHaskellDepends = [ aeson base safe-exceptions ]; testHaskellDepends = [ @@ -88346,6 +88757,34 @@ self: { broken = true; }) {}; + "faktory_1_1_0_0" = callPackage + ({ mkDerivation, aeson, aeson-casing, async, base, bytestring + , connection, cryptonite, errors, hspec, markdown-unlit, megaparsec + , memory, mtl, network, random, safe-exceptions, scanner + , semigroups, text, time, unix, unordered-containers + }: + mkDerivation { + pname = "faktory"; + version = "1.1.0.0"; + sha256 = "0bxwrrypkwhq7whaj79dkibad022bdxd8r5vh1dnd4aka3bdk8mj"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + aeson aeson-casing base bytestring connection cryptonite errors + megaparsec memory mtl network random safe-exceptions scanner + semigroups text time unix unordered-containers + ]; + executableHaskellDepends = [ aeson base safe-exceptions ]; + testHaskellDepends = [ + aeson async base hspec markdown-unlit mtl time + ]; + testToolDepends = [ markdown-unlit ]; + description = "Faktory Worker for Haskell"; + license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "fallible" = callPackage ({ mkDerivation, base, transformers }: mkDerivation { @@ -89076,16 +89515,16 @@ self: { "fbrnch" = callPackage ({ mkDerivation, aeson, async, base, bugzilla-redhat, bytestring - , config-ini, directory, email-validate, extra, filepath, haxr - , http-conduit, http-directory, http-query, lens, lens-aeson, mtl + , config-ini, directory, email-validate, extra, filepath + , http-conduit, http-directory, http-query, koji, lens, lens-aeson , network-uri, optparse-applicative, pretty-terminal, process , rpmbuild-order, simple-cmd, simple-cmd-args, text, time , typed-process, unordered-containers, utf8-string, xdg-basedir }: mkDerivation { pname = "fbrnch"; - version = "0.8.0"; - sha256 = "113mpna3crycw2kxsbniah5m71wvswy7v6j2p76ybl1qg50bq075"; + version = "0.9"; + sha256 = "1basamg578nyyjl677q3fax31pxcckxvdpw4f48gdmnmlnd9f6vm"; isLibrary = false; isExecutable = true; libraryHaskellDepends = [ @@ -89093,8 +89532,8 @@ self: { ]; executableHaskellDepends = [ aeson async base bugzilla-redhat bytestring config-ini directory - email-validate extra filepath haxr http-conduit http-directory - http-query mtl network-uri optparse-applicative pretty-terminal + email-validate extra filepath http-conduit http-directory + http-query koji network-uri optparse-applicative pretty-terminal process rpmbuild-order simple-cmd simple-cmd-args text time typed-process unordered-containers utf8-string xdg-basedir ]; @@ -89208,8 +89647,8 @@ self: { }: mkDerivation { pname = "fclabels"; - version = "2.0.5"; - sha256 = "0ppvc1s5bvx38y6yd6ib1wxi3y2j438xzl9iqhpr4hc1zwvsi6rx"; + version = "2.0.5.1"; + sha256 = "0g4ca5pm2bafsnpari7wqhy79i5qs8njb3kdknk0xsrazdsl174k"; libraryHaskellDepends = [ base base-orphans mtl template-haskell transformers ]; @@ -89475,6 +89914,8 @@ self: { pname = "feed"; version = "1.3.2.0"; sha256 = "0kv3vx3njqlhwvkmf12m1gmwl8jj97kfa60da2362vwdavhcf4dk"; + revision = "1"; + editedCabalFile = "0lg9yphl07hbknzx0nvdxvcw05bpxc5ac9sqb26lv4d9nkb72blg"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base base-compat bytestring old-locale old-time safe text time @@ -90110,8 +90551,8 @@ self: { }: mkDerivation { pname = "fft"; - version = "0.1.8.6"; - sha256 = "0hjv3r09imb2ypgbz3qj9hf4f36v977z38gdcad3qa0334qdin1f"; + version = "0.1.8.7"; + sha256 = "1kkdw08qzsgjgg9z7pf5876cn2hlq22cgvc3k2amidn317n2d6vz"; libraryHaskellDepends = [ array base carray ix-shapable storable-complex syb transformers ]; @@ -91411,8 +91852,8 @@ self: { }: mkDerivation { pname = "fitspec"; - version = "0.4.8"; - sha256 = "01xfchs98xy5436kchzysnvwgm00s2srsn5xyxx3r04pzzb5cbd9"; + version = "0.4.10"; + sha256 = "1jq4brkwq59hj8fpyfq60hywj9hx82qp0yjvyl0bmwy8jpc6j91k"; libraryHaskellDepends = [ base cmdargs leancheck template-haskell ]; @@ -93646,8 +94087,8 @@ self: { pname = "force-layout"; version = "0.4.0.6"; sha256 = "17956k3mab2xhrmfy7fj5gh08h43yjlsryi5acjhnkmin5arhwpp"; - revision = "6"; - editedCabalFile = "0vhb3ysfi483zfp351ywjc6cg1ihz44wq137zbrkrkigxa3qhg8f"; + revision = "7"; + editedCabalFile = "07508rqcarhrw4i22sszr4mplxk8m61g0c3rm273ga89bajf9nja"; libraryHaskellDepends = [ base containers data-default-class lens linear ]; @@ -93942,24 +94383,6 @@ self: { }) {}; "formatting" = callPackage - ({ mkDerivation, array, base, bytestring, clock, ghc-prim, hspec - , integer-gmp, old-locale, scientific, semigroups, text, time - , transformers - }: - mkDerivation { - pname = "formatting"; - version = "6.3.7"; - sha256 = "06jwb1pmh15f2b9dfplm64y9yszazg26m4h7rl4dn4inqg14znqc"; - libraryHaskellDepends = [ - array base bytestring clock ghc-prim integer-gmp old-locale - scientific semigroups text time transformers - ]; - testHaskellDepends = [ base hspec semigroups text ]; - description = "Combinator-based type-safe formatting (like printf() or FORMAT)"; - license = lib.licenses.bsd3; - }) {}; - - "formatting_7_1_2" = callPackage ({ mkDerivation, base, clock, criterion, double-conversion , ghc-prim, hspec, old-locale, QuickCheck, scientific, text, time , transformers @@ -93978,7 +94401,6 @@ self: { ]; description = "Combinator-based type-safe formatting (like printf() or FORMAT)"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "forml" = callPackage @@ -94127,8 +94549,8 @@ self: { }: mkDerivation { pname = "fortran-src"; - version = "0.4.2"; - sha256 = "03x1pxkpl41r4cf034qj5ls946azbzwdyxkp2nxxymjx0nm2lsv6"; + version = "0.4.3"; + sha256 = "0wmyx0zlz2hmbrag8wgm8k33z9p0c2ylf3490hf9nz9b2303wflq"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -94690,26 +95112,6 @@ self: { }) {}; "free" = callPackage - ({ mkDerivation, base, comonad, containers, distributive - , exceptions, indexed-traversable, mtl, profunctors, semigroupoids - , template-haskell, th-abstraction, transformers, transformers-base - }: - mkDerivation { - pname = "free"; - version = "5.1.5"; - sha256 = "0rpnimi3iyr6n9q2ny365mp1l5rjjys15aggcikgnrfn0d656nw6"; - revision = "1"; - editedCabalFile = "1ac4f5n3spmxy9ajlikn9ffswg9l59s7kzwpgcpz8vkc2qf959g1"; - libraryHaskellDepends = [ - base comonad containers distributive exceptions indexed-traversable - mtl profunctors semigroupoids template-haskell th-abstraction - transformers transformers-base - ]; - description = "Monads for free"; - license = lib.licenses.bsd3; - }) {}; - - "free_5_1_7" = callPackage ({ mkDerivation, base, comonad, containers, distributive , exceptions, indexed-traversable, mtl, profunctors, semigroupoids , template-haskell, th-abstraction, transformers, transformers-base @@ -94725,7 +95127,6 @@ self: { ]; description = "Monads for free"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "free-algebras" = callPackage @@ -95931,8 +96332,8 @@ self: { }: mkDerivation { pname = "ftdi"; - version = "0.3.0.0"; - sha256 = "1yhcpd9jzhmvlmhidyv70s5mvakq6jn9lb3zh132lrqsrirbmpx8"; + version = "0.3.0.1"; + sha256 = "0xa1dld03ai3mxqywia3f9pvyz67slw7dai8m97iqg1xysd8ykzr"; libraryHaskellDepends = [ async base base-unicode-symbols bytestring transformers usb vector ]; @@ -96727,8 +97128,8 @@ self: { }: mkDerivation { pname = "fused-effects-exceptions"; - version = "1.1.0.0"; - sha256 = "0r5xfv5cknxz21viqcpa8xjd57sbadp2vf7nk7z9j1sd5faprmji"; + version = "1.1.0.1"; + sha256 = "1b1qflz64xgw1bd3z794vyvb9906g3x9v72w89z27142a6igy4hr"; libraryHaskellDepends = [ base fused-effects transformers ]; testHaskellDepends = [ base fused-effects tasty tasty-hunit transformers @@ -96768,6 +97169,8 @@ self: { benchmarkHaskellDepends = [ base fused-effects-random gauge ]; description = "High-quality random number generation as an effect"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "fused-effects-optics" = callPackage @@ -96881,8 +97284,8 @@ self: { }: mkDerivation { pname = "fusion-plugin"; - version = "0.2.2"; - sha256 = "1d7avmbrqgvp9c4jyrlw344hml29f3vy5m5fgyrsd1z3g4fymakb"; + version = "0.2.3"; + sha256 = "1lklrd3afvm8fwd14yiavx5h8zxjkn2k2vqnxbqwcakcnljxrfyq"; libraryHaskellDepends = [ base containers directory filepath fusion-plugin-types ghc syb time transformers @@ -96917,10 +97320,8 @@ self: { }: mkDerivation { pname = "futhark"; - version = "0.19.4"; - sha256 = "1d4704pmknv39yw2bjxkp5n2wl9a14n3pn221m3src5z237lchq7"; - revision = "1"; - editedCabalFile = "1d8vwgdvj1dib7l4a3lhn03ri2mbnm57wnd3pki6m7y8sr3xk730"; + version = "0.19.6"; + sha256 = "1wpg2ad2xv60xsdvnq3246nps3ldc00n58k7jxmh8lrx5bjzg263"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -96943,44 +97344,41 @@ self: { license = lib.licenses.isc; }) {}; - "futhark_0_19_5" = callPackage - ({ mkDerivation, aeson, alex, ansi-terminal, array, base, binary - , blaze-html, bmp, bytestring, bytestring-to-vector, cmark-gfm - , containers, directory, directory-tree, dlist, file-embed - , filepath, free, gitrev, happy, hashable, haskeline - , language-c-quote, mainland-pretty, megaparsec, mtl - , neat-interpolation, parallel, parser-combinators, pcg-random - , process, process-extras, QuickCheck, regex-tdfa, srcloc, tasty - , tasty-hunit, tasty-quickcheck, template-haskell, temporary - , terminal-size, text, time, transformers, unordered-containers - , utf8-string, vector, vector-binary-instances, versions - , zip-archive, zlib + "futhark-data" = callPackage + ({ mkDerivation, base, binary, bytestring, bytestring-to-vector + , containers, megaparsec, mtl, QuickCheck, tasty, tasty-hunit + , tasty-quickcheck, text, vector, vector-binary-instances }: mkDerivation { - pname = "futhark"; - version = "0.19.5"; - sha256 = "1x922g3iq50an8jv75370qr0qslmxnrrqbwr7adca30ljaa7nfvh"; - isLibrary = true; - isExecutable = true; + pname = "futhark-data"; + version = "1.0.0.1"; + sha256 = "126b7igrk0aldj4kjwkyvvsy3v64g9iv6w9ladbbfnd4qw7svswm"; libraryHaskellDepends = [ - aeson ansi-terminal array base binary blaze-html bmp bytestring - bytestring-to-vector cmark-gfm containers directory directory-tree - dlist file-embed filepath free gitrev hashable haskeline - language-c-quote mainland-pretty megaparsec mtl neat-interpolation - parallel pcg-random process process-extras regex-tdfa srcloc - template-haskell temporary terminal-size text time transformers - unordered-containers utf8-string vector vector-binary-instances - versions zip-archive zlib + base binary bytestring bytestring-to-vector containers megaparsec + mtl text vector vector-binary-instances ]; - libraryToolDepends = [ alex happy ]; - executableHaskellDepends = [ base text ]; testHaskellDepends = [ - base containers megaparsec mtl parser-combinators QuickCheck tasty - tasty-hunit tasty-quickcheck text + base binary bytestring megaparsec QuickCheck tasty tasty-hunit + tasty-quickcheck text vector ]; - description = "An optimising compiler for a functional, array-oriented language"; + description = "An implementation of the Futhark data format"; + license = lib.licenses.isc; + }) {}; + + "futhark-server" = callPackage + ({ mkDerivation, base, binary, bytestring, directory, futhark-data + , mtl, process, temporary, text + }: + mkDerivation { + pname = "futhark-server"; + version = "1.0.0.0"; + sha256 = "00b0qblbx6sg6nk15zasbhbw9i63dmmpcsqdkqvxskr31qzj6vaa"; + libraryHaskellDepends = [ + base binary bytestring directory futhark-data mtl process temporary + text + ]; + description = "Client implementation of the Futhark server protocol"; license = lib.licenses.isc; - hydraPlatforms = lib.platforms.none; }) {}; "futhask" = callPackage @@ -97303,8 +97701,8 @@ self: { ({ mkDerivation, base, bytestring, serialport }: mkDerivation { pname = "fxpak"; - version = "0.1.1"; - sha256 = "1nnb47i17b4rc2ayzq5qaydx0ss3m8yw02pjwfmipk8398qr8ss5"; + version = "0.1.2"; + sha256 = "1mrpbz32aczrh5aw550p1vzvj8zqhcnmj574sc012r3z1c0g1cin"; libraryHaskellDepends = [ base bytestring serialport ]; description = "Interface to the FXPak/FXPak Pro USB interface"; license = lib.licenses.bsd3; @@ -98598,25 +98996,6 @@ self: { }) {}; "generic-deriving" = callPackage - ({ mkDerivation, base, containers, ghc-prim, hspec, hspec-discover - , template-haskell, th-abstraction - }: - mkDerivation { - pname = "generic-deriving"; - version = "1.13.1"; - sha256 = "1glsl15dc40wn1r851bray6i450g82xa2n0q53p1i3p5x903mdg9"; - revision = "1"; - editedCabalFile = "1278ipm12h6xhz8mwam065kj62wiw11d3amc6iifx0qzyxiyg5cm"; - libraryHaskellDepends = [ - base containers ghc-prim template-haskell th-abstraction - ]; - testHaskellDepends = [ base hspec template-haskell ]; - testToolDepends = [ hspec-discover ]; - description = "Generic programming library for generalised deriving"; - license = lib.licenses.bsd3; - }) {}; - - "generic-deriving_1_14" = callPackage ({ mkDerivation, base, containers, ghc-prim, hspec, hspec-discover , template-haskell, th-abstraction }: @@ -98633,7 +99012,6 @@ self: { testToolDepends = [ hspec-discover ]; description = "Generic programming library for generalised deriving"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "generic-enum" = callPackage @@ -98814,6 +99192,8 @@ self: { pname = "generic-monoid"; version = "0.1.0.1"; sha256 = "1pradfv1i2z73f3vxx78ahmfsdszcgi44kn29aww2hdgf2np5l6g"; + revision = "1"; + editedCabalFile = "17dfarnbv6si8rgajb3jqsbc4k1nxmvga2h1lhmpnq43n2fdkqkq"; libraryHaskellDepends = [ base ]; description = "Derive monoid instances for product types"; license = lib.licenses.bsd3; @@ -98853,12 +99233,13 @@ self: { }) {}; "generic-override" = callPackage - ({ mkDerivation, base }: + ({ mkDerivation, base, hspec }: mkDerivation { pname = "generic-override"; - version = "0.0.0.0"; - sha256 = "13v5zrhhzjzm4fib5zjsp4sf1hhgx9450mmy4v12h7bgljz8xfd5"; + version = "0.2.0.0"; + sha256 = "0hrya5rqdrgl66hm818v6jf11hfrvra242n1sdjypkv13zxzsk6x"; libraryHaskellDepends = [ base ]; + testHaskellDepends = [ base hspec ]; description = "Provides functionality for overriding instances for generic derivation"; license = lib.licenses.bsd3; }) {}; @@ -98867,8 +99248,8 @@ self: { ({ mkDerivation, aeson, base, generic-override, hspec, text }: mkDerivation { pname = "generic-override-aeson"; - version = "0.0.0.0"; - sha256 = "02xwssk7158k7hhh170knxn7f2s7slcp4sy7a4b3w4cn1r016bhz"; + version = "0.0.0.2"; + sha256 = "1hgrxhfssxm4l0c98ffgc20lbzy34bbhzr4vg06vqg51m4620b25"; libraryHaskellDepends = [ aeson base generic-override ]; testHaskellDepends = [ aeson base generic-override hspec text ]; description = "Provides orphan instances necessary for integrating generic-override and aeson"; @@ -99270,6 +99651,18 @@ self: { license = lib.licenses.bsd3; }) {}; + "geniplate-mirror_0_7_8" = callPackage + ({ mkDerivation, base, mtl, template-haskell }: + mkDerivation { + pname = "geniplate-mirror"; + version = "0.7.8"; + sha256 = "1kw4q7l556sfd82r2p0z3cv4sg8kcr45wb4s2sy996bs3ymn8fjb"; + libraryHaskellDepends = [ base mtl template-haskell ]; + description = "Use Template Haskell to generate Uniplate-like functions"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "geniserver" = callPackage ({ mkDerivation, base, bytestring, cmdargs, GenI, http-types, json , snap-core, snap-server, text, transformers, utf8-string @@ -99333,6 +99726,21 @@ self: { license = lib.licenses.mit; }) {}; + "genvalidity_0_11_0_2" = callPackage + ({ mkDerivation, base, hspec, hspec-core, QuickCheck, random + , validity + }: + mkDerivation { + pname = "genvalidity"; + version = "0.11.0.2"; + sha256 = "16bd5dx0ngc8z7mij23i2l3a8v3c112x8ksd623alik18zx7pi8j"; + libraryHaskellDepends = [ base QuickCheck random validity ]; + testHaskellDepends = [ base hspec hspec-core QuickCheck ]; + description = "Testing utilities for the validity library"; + license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + }) {}; + "genvalidity-aeson" = callPackage ({ mkDerivation, aeson, base, genvalidity, genvalidity-hspec , genvalidity-scientific, genvalidity-text @@ -100134,6 +100542,21 @@ self: { broken = true; }) {}; + "geomancy" = callPackage + ({ mkDerivation, base, criterion, deepseq, hedgehog, linear }: + mkDerivation { + pname = "geomancy"; + version = "0.2.2.3"; + sha256 = "17xg6cxyl83dxlb1yv85cnavw8cgqj3mbr1v9sa46fawb4mlv9i8"; + revision = "1"; + editedCabalFile = "06cfw1jf1380cxqc5ywj768svym7nm0rmrglhjkfz6p29arc6hwr"; + libraryHaskellDepends = [ base deepseq ]; + testHaskellDepends = [ base deepseq hedgehog linear ]; + benchmarkHaskellDepends = [ base criterion deepseq linear ]; + description = "Geometry and matrix manipulation"; + license = lib.licenses.bsd3; + }) {}; + "geos" = callPackage ({ mkDerivation, base, bytestring, cassava, geos, hspec, mtl , transformers, vector @@ -100156,6 +100579,24 @@ self: { broken = true; }) {inherit (pkgs) geos;}; + "gerrit" = callPackage + ({ mkDerivation, aeson, base, bytestring, containers, directory + , http-client, http-client-tls, tasty, tasty-hunit, text + }: + mkDerivation { + pname = "gerrit"; + version = "0.1.0.0"; + sha256 = "03lcf9xvyhypzkrs6lv7dnwsxnn52vnnl6mhsbbhmpv2bf59whq2"; + libraryHaskellDepends = [ + aeson base bytestring containers http-client http-client-tls text + ]; + testHaskellDepends = [ + aeson base bytestring directory tasty tasty-hunit + ]; + description = "A gerrit client library"; + license = lib.licenses.asl20; + }) {}; + "getemx" = callPackage ({ mkDerivation, base, curl, directory, filepath, haskell98, hxt , mtl, old-locale, process, time @@ -100410,8 +100851,8 @@ self: { }: mkDerivation { pname = "ghc-check"; - version = "0.5.0.4"; - sha256 = "05yrj2xm3b44h2c5r5qxsfwm1v89zhv0l30wdcc6439hd94w1w8q"; + version = "0.5.0.5"; + sha256 = "0ml5v9r729i24dwj54fh8fqr55xbndc7wpbkzaids4r666hsjlsi"; libraryHaskellDepends = [ base containers directory filepath ghc ghc-paths process safe-exceptions template-haskell th-compat transformers @@ -100517,6 +100958,100 @@ self: { broken = true; }) {}; + "ghc-debug-brick" = callPackage + ({ mkDerivation, base, brick, containers, cursor, directory + , filepath, ghc-debug-client, ghc-debug-common + , ghc-debug-convention, microlens, microlens-platform, text, time + , unordered-containers, vty + }: + mkDerivation { + pname = "ghc-debug-brick"; + version = "0.1.0.0"; + sha256 = "1gndynk42ln3hp0lg1y4rjzz6kmgp68lw077dj4zbbsam9skfgs0"; + isLibrary = false; + isExecutable = true; + executableHaskellDepends = [ + base brick containers cursor directory filepath ghc-debug-client + ghc-debug-common ghc-debug-convention microlens microlens-platform + text time unordered-containers vty + ]; + description = "A simple TUI using ghc-debug"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + + "ghc-debug-client" = callPackage + ({ mkDerivation, async, base, binary, bitwise, containers + , directory, dom-lt, eventlog2html, filepath, ghc-debug-common + , ghc-debug-convention, ghc-prim, hashable, haxl, language-dot + , monoidal-containers, mtl, network, process, psqueues, stm, text + , unordered-containers + }: + mkDerivation { + pname = "ghc-debug-client"; + version = "0.1.0.0"; + sha256 = "1sl0xa7dhgnqprmi6sfbxzxz9m0vkni262s1ks09dkqs52bv68sx"; + libraryHaskellDepends = [ + async base binary bitwise containers directory dom-lt eventlog2html + filepath ghc-debug-common ghc-debug-convention ghc-prim hashable + haxl language-dot monoidal-containers mtl network process psqueues + stm text unordered-containers + ]; + description = "Useful functions for writing heap analysis tools which use ghc-debug"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + + "ghc-debug-common" = callPackage + ({ mkDerivation, array, base, binary, bytestring, containers, cpu + , deepseq, directory, dom-lt, filepath, ghc-debug-convention + , ghc-heap, hashable, transformers, unordered-containers + }: + mkDerivation { + pname = "ghc-debug-common"; + version = "0.1.0.0"; + sha256 = "088ir70k1ssyri4w76si0bn186lq08hzdfhdr09bmx80dmyp5vzy"; + libraryHaskellDepends = [ + array base binary bytestring containers cpu deepseq directory + dom-lt filepath ghc-debug-convention ghc-heap hashable transformers + unordered-containers + ]; + description = "Connect to a socket created by ghc-debug-stub and analyse the heap of the debuggee program"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + + "ghc-debug-convention" = callPackage + ({ mkDerivation, base, directory, filepath }: + mkDerivation { + pname = "ghc-debug-convention"; + version = "0.1.0.0"; + sha256 = "1cgsilxnz4dmx3y27qysyhf3jhsvj402wb0f50l30kqmlr0cp1hj"; + libraryHaskellDepends = [ base directory filepath ]; + description = "Definitions needed by ghc-debug-stub and ghc-debug-common"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + + "ghc-debug-stub" = callPackage + ({ mkDerivation, base, directory, filepath, ghc-debug-convention + , ghc-prim + }: + mkDerivation { + pname = "ghc-debug-stub"; + version = "0.1.0.0"; + sha256 = "1gwp2hq3pxp9d4m4l30iwxlkd5ha9wk9mlhnlppiha09vdccd04r"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base directory filepath ghc-debug-convention ghc-prim + ]; + description = "Functions for instrumenting your application so the heap can be analysed with ghc-debug-common"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "ghc-dump-core" = callPackage ({ mkDerivation, base, bytestring, directory, filepath, ghc , serialise, text @@ -100830,16 +101365,17 @@ self: { "ghc-lib" = callPackage ({ mkDerivation, alex, array, base, binary, bytestring, containers , deepseq, directory, filepath, ghc-lib-parser, ghc-prim, happy - , hpc, pretty, process, time, transformers, unix + , hpc, pretty, process, rts, time, transformers, unix }: mkDerivation { pname = "ghc-lib"; - version = "8.10.4.20210206"; - sha256 = "1zzglnpbnj9ijna6g3rmykqir3iqcg2afmjg9q0ng3imbv40slhs"; + version = "8.10.5.20210606"; + sha256 = "0bl2jp44s3pd1a1sg0kslkhi97f4z2423kdkizg65m6cvmk25ijs"; enableSeparateDataOutput = true; libraryHaskellDepends = [ array base binary bytestring containers deepseq directory filepath - ghc-lib-parser ghc-prim hpc pretty process time transformers unix + ghc-lib-parser ghc-prim hpc pretty process rts time transformers + unix ]; libraryToolDepends = [ alex happy ]; description = "The GHC API, decoupled from GHC versions"; @@ -100874,8 +101410,8 @@ self: { }: mkDerivation { pname = "ghc-lib-parser"; - version = "8.10.4.20210206"; - sha256 = "07j3j67hxz43l1kkdfanghd935wiccvmw7sgk47fjymw6fdx92p2"; + version = "8.10.5.20210606"; + sha256 = "0pqsq49kvqwgbi6jw0dycbdzyldi0sannyqkfzavhqjf4mwjzn4a"; enableSeparateDataOutput = true; libraryHaskellDepends = [ array base binary bytestring containers deepseq directory filepath @@ -100914,8 +101450,8 @@ self: { }: mkDerivation { pname = "ghc-lib-parser-ex"; - version = "8.10.0.19"; - sha256 = "0qdkqv7ss9b2mnf39gpbq7i50ypccnl3wdmxiq148zrxbglzfqw9"; + version = "8.10.0.21"; + sha256 = "0ynrn7qdmim35fs9qdlbajqwyz559x1l9cqmjhb54vbrs2xnk6vp"; libraryHaskellDepends = [ base bytestring containers ghc ghc-boot ghc-boot-th uniplate ]; @@ -101405,8 +101941,8 @@ self: { }: mkDerivation { pname = "ghc-tags"; - version = "1.1"; - sha256 = "0dk80lss2iq2yi7cnx78nk7pfnc3khwm3xincj3ybaiy60c94x8x"; + version = "1.3"; + sha256 = "1fshj5zdnhr879c9q48mb89f1fidc2skgmgi385sa5r8wxn1ili0"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -101496,6 +102032,18 @@ self: { license = lib.licenses.bsd2; }) {}; + "ghc-tcplugins-extra_0_4_2" = callPackage + ({ mkDerivation, base, ghc }: + mkDerivation { + pname = "ghc-tcplugins-extra"; + version = "0.4.2"; + sha256 = "1gddqcczb8ixmrlfbfb06dc470jsjhvsxx3q2nsd4mcx2x6jdk08"; + libraryHaskellDepends = [ base ghc ]; + description = "Utilities for writing GHC type-checker plugins"; + license = lib.licenses.bsd2; + hydraPlatforms = lib.platforms.none; + }) {}; + "ghc-time-alloc-prof" = callPackage ({ mkDerivation, attoparsec, base, containers, directory, filepath , process, tasty, tasty-hunit, temporary, text, time @@ -101563,6 +102111,30 @@ self: { license = lib.licenses.bsd2; }) {}; + "ghc-typelits-extra_0_4_3" = callPackage + ({ mkDerivation, base, containers, ghc, ghc-prim + , ghc-tcplugins-extra, ghc-typelits-knownnat + , ghc-typelits-natnormalise, integer-gmp, tasty, tasty-hunit + , transformers + }: + mkDerivation { + pname = "ghc-typelits-extra"; + version = "0.4.3"; + sha256 = "06g40q0n2d10c2zksx5rrjkvm5ywi3rh41hbiwy4zs28x9idsv18"; + libraryHaskellDepends = [ + base containers ghc ghc-prim ghc-tcplugins-extra + ghc-typelits-knownnat ghc-typelits-natnormalise integer-gmp + transformers + ]; + testHaskellDepends = [ + base ghc-typelits-knownnat ghc-typelits-natnormalise tasty + tasty-hunit + ]; + description = "Additional type-level operations on GHC.TypeLits.Nat"; + license = lib.licenses.bsd2; + hydraPlatforms = lib.platforms.none; + }) {}; + "ghc-typelits-knownnat" = callPackage ({ mkDerivation, base, ghc, ghc-prim, ghc-tcplugins-extra , ghc-typelits-natnormalise, tasty, tasty-hunit, tasty-quickcheck @@ -101583,6 +102155,27 @@ self: { license = lib.licenses.bsd2; }) {}; + "ghc-typelits-knownnat_0_7_6" = callPackage + ({ mkDerivation, base, ghc, ghc-prim, ghc-tcplugins-extra + , ghc-typelits-natnormalise, tasty, tasty-hunit, tasty-quickcheck + , template-haskell, transformers + }: + mkDerivation { + pname = "ghc-typelits-knownnat"; + version = "0.7.6"; + sha256 = "10m4y0hf25w2i40464pz85lqs5dr8cznl191icnibc5fjynyzd9v"; + libraryHaskellDepends = [ + base ghc ghc-prim ghc-tcplugins-extra ghc-typelits-natnormalise + template-haskell transformers + ]; + testHaskellDepends = [ + base ghc-typelits-natnormalise tasty tasty-hunit tasty-quickcheck + ]; + description = "Derive KnownNat constraints from other KnownNat constraints"; + license = lib.licenses.bsd2; + hydraPlatforms = lib.platforms.none; + }) {}; + "ghc-typelits-natnormalise" = callPackage ({ mkDerivation, base, containers, ghc, ghc-tcplugins-extra , integer-gmp, tasty, tasty-hunit, template-haskell, transformers @@ -101599,6 +102192,23 @@ self: { license = lib.licenses.bsd2; }) {}; + "ghc-typelits-natnormalise_0_7_6" = callPackage + ({ mkDerivation, base, containers, ghc, ghc-tcplugins-extra + , integer-gmp, tasty, tasty-hunit, template-haskell, transformers + }: + mkDerivation { + pname = "ghc-typelits-natnormalise"; + version = "0.7.6"; + sha256 = "09d70iw58m5g6yi8k2b52f1g0pfdqm5fzhs8rd7fgrgmi70np9bx"; + libraryHaskellDepends = [ + base containers ghc ghc-tcplugins-extra integer-gmp transformers + ]; + testHaskellDepends = [ base tasty tasty-hunit template-haskell ]; + description = "GHC typechecker plugin for types of kind GHC.TypeLits.Nat"; + license = lib.licenses.bsd2; + hydraPlatforms = lib.platforms.none; + }) {}; + "ghc-typelits-presburger" = callPackage ({ mkDerivation, base, containers, equational-reasoning, ghc , ghc-tcplugins-extra, mtl, pretty, reflection, syb, tasty @@ -101869,83 +102479,14 @@ self: { , base16-bytestring, binary, bytestring, bytestring-encoding , case-insensitive, containers, cryptohash-sha1, data-default , deepseq, dependent-map, dependent-sum, Diff, directory, dlist - , extra, filepath, fingertree, fuzzy, ghc, ghc-boot, ghc-boot-th - , ghc-check, ghc-exactprint, ghc-paths, ghc-trace-events - , ghc-typelits-knownnat, gitrev, Glob, haddock-library, hashable - , heapsize, hie-bios, hie-compat, hiedb, hls-plugin-api, hp2pretty - , hslogger, implicit-hie, implicit-hie-cradle, lens, lsp, lsp-test - , lsp-types, mtl, network-uri, opentelemetry, optparse-applicative - , parallel, prettyprinter, prettyprinter-ansi-terminal, process - , QuickCheck, quickcheck-instances, record-dot-preprocessor - , record-hasfield, regex-tdfa, retrie, rope-utf16-splay, safe - , safe-exceptions, shake, shake-bench, sorted-list, sqlite-simple - , stm, syb, tasty, tasty-expected-failure, tasty-hunit - , tasty-quickcheck, tasty-rerun, text, time, transformers, unix - , unliftio, unliftio-core, unordered-containers, utf8-string - , vector, yaml - }: - mkDerivation { - pname = "ghcide"; - version = "1.2.0.2"; - sha256 = "0r3n23i4b51bb92q6pch9knj079a26jbz0q70qfpv66154d00wld"; - revision = "1"; - editedCabalFile = "1hv74yx0x6hh506kwg7ygkajkcczfn3l00f8rc4jnr3hkhkm5v85"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - aeson array async base base16-bytestring binary bytestring - bytestring-encoding case-insensitive containers cryptohash-sha1 - data-default deepseq dependent-map dependent-sum Diff directory - dlist extra filepath fingertree fuzzy ghc ghc-boot ghc-boot-th - ghc-check ghc-exactprint ghc-paths ghc-trace-events Glob - haddock-library hashable heapsize hie-bios hie-compat hiedb - hls-plugin-api hslogger implicit-hie-cradle lens lsp lsp-types mtl - network-uri opentelemetry optparse-applicative parallel - prettyprinter prettyprinter-ansi-terminal regex-tdfa retrie - rope-utf16-splay safe safe-exceptions shake sorted-list - sqlite-simple stm syb text time transformers unix unliftio - unliftio-core unordered-containers utf8-string vector - ]; - executableHaskellDepends = [ - aeson aeson-pretty base bytestring containers data-default - directory extra filepath ghc gitrev hashable heapsize hie-bios - hiedb hls-plugin-api lens lsp lsp-test lsp-types - optparse-applicative process safe-exceptions shake text - unordered-containers - ]; - testHaskellDepends = [ - aeson async base binary bytestring containers data-default - directory extra filepath ghc ghc-typelits-knownnat haddock-library - hls-plugin-api lens lsp lsp-test lsp-types network-uri - optparse-applicative process QuickCheck quickcheck-instances - record-dot-preprocessor record-hasfield regex-tdfa rope-utf16-splay - safe safe-exceptions shake tasty tasty-expected-failure tasty-hunit - tasty-quickcheck tasty-rerun text - ]; - testToolDepends = [ implicit-hie ]; - benchmarkHaskellDepends = [ - aeson base directory extra filepath optparse-applicative shake - shake-bench text yaml - ]; - benchmarkToolDepends = [ hp2pretty implicit-hie ]; - description = "The core of an IDE"; - license = lib.licenses.asl20; - maintainers = with lib.maintainers; [ maralorn ]; - }) {}; - - "ghcide_1_3_0_0" = callPackage - ({ mkDerivation, aeson, aeson-pretty, array, async, base - , base16-bytestring, binary, bytestring, bytestring-encoding - , case-insensitive, containers, cryptohash-sha1, data-default - , deepseq, dependent-map, dependent-sum, Diff, directory, dlist - , extra, filepath, fingertree, fuzzy, ghc, ghc-boot, ghc-boot-th - , ghc-check, ghc-exactprint, ghc-paths, ghc-trace-events - , ghc-typelits-knownnat, gitrev, Glob, haddock-library, hashable - , heapsize, hie-bios, hie-compat, hiedb, hls-graph, hls-plugin-api - , hp2pretty, hslogger, implicit-hie, implicit-hie-cradle, lens, lsp - , lsp-test, lsp-types, mtl, network-uri, opentelemetry - , optparse-applicative, parallel, prettyprinter - , prettyprinter-ansi-terminal, process, QuickCheck + , extra, filepath, fingertree, fuzzy, ghc, ghc-api-compat, ghc-boot + , ghc-boot-th, ghc-check, ghc-exactprint, ghc-paths + , ghc-trace-events, ghc-typelits-knownnat, gitrev, Glob + , haddock-library, hashable, heapsize, hie-bios, hie-compat, hiedb + , hls-graph, hls-plugin-api, hp2pretty, hslogger, implicit-hie + , implicit-hie-cradle, lens, lsp, lsp-test, lsp-types, mtl + , network-uri, opentelemetry, optparse-applicative, parallel + , prettyprinter, prettyprinter-ansi-terminal, process, QuickCheck , quickcheck-instances, record-dot-preprocessor, record-hasfield , regex-tdfa, retrie, rope-utf16-splay, safe, safe-exceptions , shake, shake-bench, sorted-list, sqlite-simple, stm, syb, tasty @@ -101955,17 +102496,17 @@ self: { }: mkDerivation { pname = "ghcide"; - version = "1.3.0.0"; - sha256 = "1rmgrf4is669k5h5hbc9ryp2fc26fcacikzccjyg47jsc967ls9i"; + version = "1.4.0.2"; + sha256 = "1xqvfby6yb734lfiyxmzs17zaz56v7fh9rrfz9p81mdgspsqc739"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ aeson array async base base16-bytestring binary bytestring bytestring-encoding case-insensitive containers cryptohash-sha1 data-default deepseq dependent-map dependent-sum Diff directory - dlist extra filepath fingertree fuzzy ghc ghc-boot ghc-boot-th - ghc-check ghc-exactprint ghc-paths ghc-trace-events Glob - haddock-library hashable heapsize hie-bios hie-compat hiedb + dlist extra filepath fingertree fuzzy ghc ghc-api-compat ghc-boot + ghc-boot-th ghc-check ghc-exactprint ghc-paths ghc-trace-events + Glob haddock-library hashable heapsize hie-bios hie-compat hiedb hls-graph hls-plugin-api hslogger implicit-hie-cradle lens lsp lsp-types mtl network-uri opentelemetry optparse-applicative parallel prettyprinter prettyprinter-ansi-terminal regex-tdfa @@ -101997,7 +102538,6 @@ self: { benchmarkToolDepends = [ hp2pretty implicit-hie ]; description = "The core of an IDE"; license = lib.licenses.asl20; - hydraPlatforms = lib.platforms.none; maintainers = with lib.maintainers; [ maralorn ]; }) {}; @@ -102012,33 +102552,16 @@ self: { license = lib.licenses.mit; }) {}; - "ghcjs-base_0_2_0_0" = callPackage - ({ mkDerivation, aeson, array, attoparsec, base, binary, bytestring - , containers, deepseq, directory, dlist, ghc-prim, ghcjs-prim - , hashable, HUnit, integer-gmp, primitive, QuickCheck - , quickcheck-unicode, random, scientific, test-framework - , test-framework-hunit, test-framework-quickcheck2, text, time - , transformers, unordered-containers, vector - }: + "ghcjs-base_0_2_0_3" = callPackage + ({ mkDerivation }: mkDerivation { pname = "ghcjs-base"; - version = "0.2.0.0"; - sha256 = "0wvmxr33a3bsv1mh8lb10haapvcykp9200ppbdpjiz2wihnb4mk8"; - libraryHaskellDepends = [ - aeson attoparsec base binary bytestring containers deepseq dlist - ghc-prim ghcjs-prim hashable integer-gmp primitive scientific text - time transformers unordered-containers vector - ]; - testHaskellDepends = [ - array base bytestring deepseq directory ghc-prim ghcjs-prim HUnit - primitive QuickCheck quickcheck-unicode random test-framework - test-framework-hunit test-framework-quickcheck2 text - ]; + version = "0.2.0.3"; + sha256 = "09sv5p57l8jczbycasbb06h4qsifi5fagxwsr665yil1gickfxyg"; description = "base library for GHCJS"; license = lib.licenses.mit; hydraPlatforms = lib.platforms.none; - broken = true; - }) {ghcjs-prim = null;}; + }) {}; "ghcjs-base-stub" = callPackage ({ mkDerivation, aeson, attoparsec, base, containers, deepseq @@ -102407,25 +102930,6 @@ self: { }) {}; "gi-atk" = callPackage - ({ mkDerivation, atk, base, bytestring, Cabal, containers, gi-glib - , gi-gobject, haskell-gi, haskell-gi-base, haskell-gi-overloading - , text, transformers - }: - mkDerivation { - pname = "gi-atk"; - version = "2.0.22"; - sha256 = "1jx0wy3a0vzclqpysks3nllvm2163svll1iakh3ar7njba7ihq2x"; - setupHaskellDepends = [ base Cabal gi-glib gi-gobject haskell-gi ]; - libraryHaskellDepends = [ - base bytestring containers gi-glib gi-gobject haskell-gi - haskell-gi-base haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ atk ]; - description = "Atk bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) atk;}; - - "gi-atk_2_0_23" = callPackage ({ mkDerivation, atk, base, bytestring, Cabal, containers, gi-glib , gi-gobject, haskell-gi, haskell-gi-base, haskell-gi-overloading , text, transformers @@ -102442,33 +102946,9 @@ self: { libraryPkgconfigDepends = [ atk ]; description = "Atk bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) atk;}; "gi-cairo" = callPackage - ({ mkDerivation, base, bytestring, Cabal, cairo, containers - , haskell-gi, haskell-gi-base, haskell-gi-overloading, text - , transformers - }: - mkDerivation { - pname = "gi-cairo"; - version = "1.0.24"; - sha256 = "1g8dvfhsncigi4xrdydp8bxjrcajk1794xb24wpvqpnnbmmykpwk"; - setupHaskellDepends = [ base Cabal haskell-gi ]; - libraryHaskellDepends = [ - base bytestring containers haskell-gi haskell-gi-base - haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ cairo ]; - preCompileBuildDriver = '' - PKG_CONFIG_PATH+=":${cairo}/lib/pkgconfig" - setupCompileFlags+=" $(pkg-config --libs cairo-gobject)" - ''; - description = "Cairo bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) cairo;}; - - "gi-cairo_1_0_25" = callPackage ({ mkDerivation, base, bytestring, Cabal, cairo, containers , haskell-gi, haskell-gi-base, haskell-gi-overloading, text , transformers @@ -102489,7 +102969,6 @@ self: { ''; description = "Cairo bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) cairo;}; "gi-cairo-again" = callPackage @@ -102541,28 +103020,6 @@ self: { }) {inherit (pkgs) cairo;}; "gi-dbusmenu" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib - , gi-gobject, haskell-gi, haskell-gi-base, haskell-gi-overloading - , libdbusmenu, text, transformers - }: - mkDerivation { - pname = "gi-dbusmenu"; - version = "0.4.8"; - sha256 = "15nvfap39ayw34282br4rch1aias0m1sbapc0nkla8h5ip2naqi6"; - setupHaskellDepends = [ base Cabal gi-glib gi-gobject haskell-gi ]; - libraryHaskellDepends = [ - base bytestring containers gi-glib gi-gobject haskell-gi - haskell-gi-base haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ libdbusmenu ]; - description = "Dbusmenu bindings"; - license = lib.licenses.lgpl21Only; - platforms = [ - "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" - ]; - }) {inherit (pkgs) libdbusmenu;}; - - "gi-dbusmenu_0_4_9" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib , gi-gobject, haskell-gi, haskell-gi-base, haskell-gi-overloading , libdbusmenu, text, transformers @@ -102582,37 +103039,9 @@ self: { platforms = [ "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" ]; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) libdbusmenu;}; "gi-dbusmenugtk3" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-atk - , gi-dbusmenu, gi-gdk, gi-gdkpixbuf, gi-glib, gi-gobject, gi-gtk - , gtk3, haskell-gi, haskell-gi-base, haskell-gi-overloading - , libdbusmenu-gtk3, text, transformers - }: - mkDerivation { - pname = "gi-dbusmenugtk3"; - version = "0.4.9"; - sha256 = "1cni5368ldyblwh0jr6wva8fhi3574d258xzw49prwbjxngmjiv0"; - setupHaskellDepends = [ - base Cabal gi-atk gi-dbusmenu gi-gdk gi-gdkpixbuf gi-glib - gi-gobject gi-gtk haskell-gi - ]; - libraryHaskellDepends = [ - base bytestring containers gi-atk gi-dbusmenu gi-gdk gi-gdkpixbuf - gi-glib gi-gobject gi-gtk haskell-gi haskell-gi-base - haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ gtk3 libdbusmenu-gtk3 ]; - description = "DbusmenuGtk bindings"; - license = lib.licenses.lgpl21Only; - platforms = [ - "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" - ]; - }) {inherit (pkgs) gtk3; inherit (pkgs) libdbusmenu-gtk3;}; - - "gi-dbusmenugtk3_0_4_10" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-atk , gi-dbusmenu, gi-gdk, gi-gdkpixbuf, gi-glib, gi-gobject, gi-gtk , gtk3, haskell-gi, haskell-gi-base, haskell-gi-overloading @@ -102637,34 +103066,9 @@ self: { platforms = [ "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" ]; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) gtk3; inherit (pkgs) libdbusmenu-gtk3;}; "gi-gdk" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-cairo - , gi-gdkpixbuf, gi-gio, gi-glib, gi-gobject, gi-pango, gtk3 - , haskell-gi, haskell-gi-base, haskell-gi-overloading, text - , transformers - }: - mkDerivation { - pname = "gi-gdk"; - version = "3.0.23"; - sha256 = "18v3kb6kmryymmrz0d88nf25priwyh3yzh7raghc5ph2rv7n4w8m"; - setupHaskellDepends = [ - base Cabal gi-cairo gi-gdkpixbuf gi-gio gi-glib gi-gobject gi-pango - haskell-gi - ]; - libraryHaskellDepends = [ - base bytestring containers gi-cairo gi-gdkpixbuf gi-gio gi-glib - gi-gobject gi-pango haskell-gi haskell-gi-base - haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ gtk3 ]; - description = "Gdk bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) gtk3;}; - - "gi-gdk_3_0_24" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-cairo , gi-gdkpixbuf, gi-gio, gi-glib, gi-gobject, gi-pango, gtk3 , haskell-gi, haskell-gi-base, haskell-gi-overloading, text @@ -102686,7 +103090,6 @@ self: { libraryPkgconfigDepends = [ gtk3 ]; description = "Gdk bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) gtk3;}; "gi-gdk_4_0_3" = callPackage @@ -102715,27 +103118,6 @@ self: { }) {inherit (pkgs) gtk4;}; "gi-gdkpixbuf" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gdk-pixbuf - , gi-gio, gi-glib, gi-gobject, haskell-gi, haskell-gi-base - , haskell-gi-overloading, text, transformers - }: - mkDerivation { - pname = "gi-gdkpixbuf"; - version = "2.0.24"; - sha256 = "00hgfyln0pqx4fmffc24mx818y1lladfc288qq0f03345p5dnbna"; - setupHaskellDepends = [ - base Cabal gi-gio gi-glib gi-gobject haskell-gi - ]; - libraryHaskellDepends = [ - base bytestring containers gi-gio gi-glib gi-gobject haskell-gi - haskell-gi-base haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ gdk-pixbuf ]; - description = "GdkPixbuf bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) gdk-pixbuf;}; - - "gi-gdkpixbuf_2_0_26" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gdk-pixbuf , gi-gio, gi-glib, gi-gmodule, gi-gobject, haskell-gi , haskell-gi-base, haskell-gi-overloading, text, transformers @@ -102754,32 +103136,9 @@ self: { libraryPkgconfigDepends = [ gdk-pixbuf ]; description = "GdkPixbuf bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) gdk-pixbuf;}; "gi-gdkx11" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-cairo - , gi-gdk, gi-gio, gi-gobject, gi-xlib, gtk3, haskell-gi - , haskell-gi-base, haskell-gi-overloading, text, transformers - }: - mkDerivation { - pname = "gi-gdkx11"; - version = "3.0.10"; - sha256 = "0kfn4l5jqhllz514zw5cxf7181ybb5c11r680nwhr99b97yy0q9f"; - setupHaskellDepends = [ - base Cabal gi-cairo gi-gdk gi-gio gi-gobject gi-xlib haskell-gi - ]; - libraryHaskellDepends = [ - base bytestring containers gi-cairo gi-gdk gi-gio gi-gobject - gi-xlib haskell-gi haskell-gi-base haskell-gi-overloading text - transformers - ]; - libraryPkgconfigDepends = [ gtk3 ]; - description = "GdkX11 bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) gtk3;}; - - "gi-gdkx11_3_0_11" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-cairo , gi-gdk, gi-gio, gi-gobject, gi-xlib, gtk3, haskell-gi , haskell-gi-base, haskell-gi-overloading, text, transformers @@ -102799,7 +103158,6 @@ self: { libraryPkgconfigDepends = [ gtk3 ]; description = "GdkX11 bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) gtk3;}; "gi-gdkx11_4_0_3" = callPackage @@ -102850,25 +103208,6 @@ self: { }) {inherit (pkgs) libgit2-glib;}; "gi-gio" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib - , gi-gobject, glib, haskell-gi, haskell-gi-base - , haskell-gi-overloading, text, transformers - }: - mkDerivation { - pname = "gi-gio"; - version = "2.0.27"; - sha256 = "08qc0ahj0qmmibf92m48hv8q2x47q83c6j9a49h11dyc8l4nclx6"; - setupHaskellDepends = [ base Cabal gi-glib gi-gobject haskell-gi ]; - libraryHaskellDepends = [ - base bytestring containers gi-glib gi-gobject haskell-gi - haskell-gi-base haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ glib ]; - description = "Gio bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) glib;}; - - "gi-gio_2_0_28" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib , gi-gobject, glib, haskell-gi, haskell-gi-base , haskell-gi-overloading, text, transformers @@ -102885,7 +103224,6 @@ self: { libraryPkgconfigDepends = [ glib ]; description = "Gio bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) glib;}; "gi-girepository" = callPackage @@ -102908,25 +103246,6 @@ self: { }) {inherit (pkgs) gobject-introspection;}; "gi-glib" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, glib - , haskell-gi, haskell-gi-base, haskell-gi-overloading, text - , transformers - }: - mkDerivation { - pname = "gi-glib"; - version = "2.0.24"; - sha256 = "0zrajclbjbq6d6pyvz3s0kjq997w7j8nghi3i89l8fjw16gbmjxn"; - setupHaskellDepends = [ base Cabal haskell-gi ]; - libraryHaskellDepends = [ - base bytestring containers haskell-gi haskell-gi-base - haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ glib ]; - description = "GLib bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) glib;}; - - "gi-glib_2_0_25" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, glib , haskell-gi, haskell-gi-base, haskell-gi-overloading, text , transformers @@ -102943,7 +103262,6 @@ self: { libraryPkgconfigDepends = [ glib ]; description = "GLib bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) glib;}; "gi-gmodule" = callPackage @@ -102966,25 +103284,6 @@ self: { }) {gmodule = null;}; "gi-gobject" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib, glib - , haskell-gi, haskell-gi-base, haskell-gi-overloading, text - , transformers - }: - mkDerivation { - pname = "gi-gobject"; - version = "2.0.25"; - sha256 = "0yz80wcxhy1mm441507qsj2f7380l2iwh4s1miwpd8kb5m147n9w"; - setupHaskellDepends = [ base Cabal gi-glib haskell-gi ]; - libraryHaskellDepends = [ - base bytestring containers gi-glib haskell-gi haskell-gi-base - haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ glib ]; - description = "GObject bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) glib;}; - - "gi-gobject_2_0_26" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib, glib , haskell-gi, haskell-gi-base, haskell-gi-overloading, text , transformers @@ -103001,31 +103300,9 @@ self: { libraryPkgconfigDepends = [ glib ]; description = "GObject bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) glib;}; "gi-graphene" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib - , gi-gobject, graphene-gobject, haskell-gi, haskell-gi-base - , haskell-gi-overloading, text, transformers - }: - mkDerivation { - pname = "gi-graphene"; - version = "1.0.2"; - sha256 = "1mszvx58mdazy8202s0c05hp800b92n21g4rxwvp5k0ms7qz95nq"; - setupHaskellDepends = [ base Cabal gi-glib gi-gobject haskell-gi ]; - libraryHaskellDepends = [ - base bytestring containers gi-glib gi-gobject haskell-gi - haskell-gi-base haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ graphene-gobject ]; - description = "Graphene bindings"; - license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; - broken = true; - }) {graphene-gobject = null;}; - - "gi-graphene_1_0_3" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib , gi-gobject, graphene-gobject, haskell-gi, haskell-gi-base , haskell-gi-overloading, text, transformers @@ -103202,30 +103479,6 @@ self: { }) {inherit (pkgs.gst_all_1) gst-plugins-base;}; "gi-gtk" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-atk - , gi-cairo, gi-gdk, gi-gdkpixbuf, gi-gio, gi-glib, gi-gobject - , gi-pango, gtk3, haskell-gi, haskell-gi-base - , haskell-gi-overloading, text, transformers - }: - mkDerivation { - pname = "gi-gtk"; - version = "3.0.36"; - sha256 = "0bzb3xrax5k5r5fd6vv4by6hprmk77qrqr9mqn3dxqm6an8jwjn9"; - setupHaskellDepends = [ - base Cabal gi-atk gi-cairo gi-gdk gi-gdkpixbuf gi-gio gi-glib - gi-gobject gi-pango haskell-gi - ]; - libraryHaskellDepends = [ - base bytestring containers gi-atk gi-cairo gi-gdk gi-gdkpixbuf - gi-gio gi-glib gi-gobject gi-pango haskell-gi haskell-gi-base - haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ gtk3 ]; - description = "Gtk bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) gtk3;}; - - "gi-gtk_3_0_37" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-atk , gi-cairo, gi-gdk, gi-gdkpixbuf, gi-gio, gi-glib, gi-gobject , gi-pango, gtk3, haskell-gi, haskell-gi-base @@ -103247,7 +103500,6 @@ self: { libraryPkgconfigDepends = [ gtk3 ]; description = "Gtk bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) gtk3;}; "gi-gtk_4_0_4" = callPackage @@ -103321,23 +103573,6 @@ self: { }) {}; "gi-gtk-hs" = callPackage - ({ mkDerivation, base, base-compat, containers, gi-gdk - , gi-gdkpixbuf, gi-glib, gi-gobject, gi-gtk, haskell-gi-base, mtl - , text, transformers - }: - mkDerivation { - pname = "gi-gtk-hs"; - version = "0.3.9"; - sha256 = "1ql14ripivfh1w65wnr6mw64f2vlwi54gz70c8qql9f5szbnjky1"; - libraryHaskellDepends = [ - base base-compat containers gi-gdk gi-gdkpixbuf gi-glib gi-gobject - gi-gtk haskell-gi-base mtl text transformers - ]; - description = "A wrapper for gi-gtk, adding a few more idiomatic API parts on top"; - license = lib.licenses.lgpl21Only; - }) {}; - - "gi-gtk-hs_0_3_10" = callPackage ({ mkDerivation, base, base-compat, containers, gi-gdk , gi-gdkpixbuf, gi-glib, gi-gobject, gi-gtk, haskell-gi-base, mtl , text, transformers @@ -103352,7 +103587,6 @@ self: { ]; description = "A wrapper for gi-gtk, adding a few more idiomatic API parts on top"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {}; "gi-gtkosxapplication" = callPackage @@ -103455,25 +103689,6 @@ self: { }) {inherit (pkgs) libhandy;}; "gi-harfbuzz" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib - , gi-gobject, harfbuzz, harfbuzz-gobject, haskell-gi - , haskell-gi-base, haskell-gi-overloading, text, transformers - }: - mkDerivation { - pname = "gi-harfbuzz"; - version = "0.0.3"; - sha256 = "1rapwaf8rz18rsai54lq9wcccf9j0ihcafvwhrzvgl17fjqcfqaz"; - setupHaskellDepends = [ base Cabal gi-glib gi-gobject haskell-gi ]; - libraryHaskellDepends = [ - base bytestring containers gi-glib gi-gobject haskell-gi - haskell-gi-base haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ harfbuzz harfbuzz-gobject ]; - description = "HarfBuzz bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) harfbuzz; harfbuzz-gobject = null;}; - - "gi-harfbuzz_0_0_4" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib , gi-gobject, harfbuzz, harfbuzz-gobject, haskell-gi , haskell-gi-base, haskell-gi-overloading, text, transformers @@ -103490,7 +103705,6 @@ self: { libraryPkgconfigDepends = [ harfbuzz harfbuzz-gobject ]; description = "HarfBuzz bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) harfbuzz; harfbuzz-gobject = null;}; "gi-ibus" = callPackage @@ -103518,25 +103732,6 @@ self: { }) {inherit (pkgs) ibus;}; "gi-javascriptcore" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib - , gi-gobject, haskell-gi, haskell-gi-base, haskell-gi-overloading - , text, transformers, webkitgtk - }: - mkDerivation { - pname = "gi-javascriptcore"; - version = "4.0.22"; - sha256 = "191ipwjxn94dxz6saapidvjr8bbnl0y3p4f10s6mj6h6pkb5axjb"; - setupHaskellDepends = [ base Cabal gi-glib gi-gobject haskell-gi ]; - libraryHaskellDepends = [ - base bytestring containers gi-glib gi-gobject haskell-gi - haskell-gi-base haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ webkitgtk ]; - description = "JavaScriptCore bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) webkitgtk;}; - - "gi-javascriptcore_4_0_23" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib , gi-gobject, haskell-gi, haskell-gi-base, haskell-gi-overloading , text, transformers, webkitgtk @@ -103553,7 +103748,6 @@ self: { libraryPkgconfigDepends = [ webkitgtk ]; description = "JavaScriptCore bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) webkitgtk;}; "gi-notify" = callPackage @@ -103602,31 +103796,6 @@ self: { }) {inherit (pkgs) ostree;}; "gi-pango" = callPackage - ({ mkDerivation, base, bytestring, Cabal, cairo, containers - , gi-glib, gi-gobject, gi-harfbuzz, haskell-gi, haskell-gi-base - , haskell-gi-overloading, pango, text, transformers - }: - mkDerivation { - pname = "gi-pango"; - version = "1.0.23"; - sha256 = "18pp83nzqdxzq15g3rm0xym4hdq3f851m6mshlb4f7liy168vpl9"; - setupHaskellDepends = [ - base Cabal gi-glib gi-gobject gi-harfbuzz haskell-gi - ]; - libraryHaskellDepends = [ - base bytestring containers gi-glib gi-gobject gi-harfbuzz - haskell-gi haskell-gi-base haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ cairo pango ]; - preCompileBuildDriver = '' - PKG_CONFIG_PATH+=":${cairo}/lib/pkgconfig" - setupCompileFlags+=" $(pkg-config --libs cairo-gobject)" - ''; - description = "Pango bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) cairo; inherit (pkgs) pango;}; - - "gi-pango_1_0_24" = callPackage ({ mkDerivation, base, bytestring, Cabal, cairo, containers , gi-glib, gi-gobject, gi-harfbuzz, haskell-gi, haskell-gi-base , haskell-gi-overloading, pango, text, transformers @@ -103649,7 +103818,6 @@ self: { ''; description = "Pango bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) cairo; inherit (pkgs) pango;}; "gi-pangocairo" = callPackage @@ -103721,27 +103889,6 @@ self: { }) {inherit (pkgs) libsecret;}; "gi-soup" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-gio - , gi-glib, gi-gobject, haskell-gi, haskell-gi-base - , haskell-gi-overloading, libsoup, text, transformers - }: - mkDerivation { - pname = "gi-soup"; - version = "2.4.23"; - sha256 = "109n57ff69xmwhm3lvf0ajid3zl0l9sr1qdnvis06bhcddw9i1ap"; - setupHaskellDepends = [ - base Cabal gi-gio gi-glib gi-gobject haskell-gi - ]; - libraryHaskellDepends = [ - base bytestring containers gi-gio gi-glib gi-gobject haskell-gi - haskell-gi-base haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ libsoup ]; - description = "Libsoup bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) libsoup;}; - - "gi-soup_2_4_24" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-gio , gi-glib, gi-gobject, haskell-gi, haskell-gi-base , haskell-gi-overloading, libsoup, text, transformers @@ -103760,7 +103907,6 @@ self: { libraryPkgconfigDepends = [ libsoup ]; description = "Libsoup bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) libsoup;}; "gi-vips" = callPackage @@ -103835,30 +103981,6 @@ self: { }) {inherit (pkgs) webkitgtk24x-gtk3;}; "gi-webkit2" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, gi-atk - , gi-cairo, gi-gdk, gi-gio, gi-glib, gi-gobject, gi-gtk - , gi-javascriptcore, gi-soup, haskell-gi, haskell-gi-base - , haskell-gi-overloading, text, transformers, webkitgtk - }: - mkDerivation { - pname = "gi-webkit2"; - version = "4.0.26"; - sha256 = "0vbsc5zd1m1k47zpq620kzsiyg2g25ag6fvkwj0hdlq24xhyiavr"; - setupHaskellDepends = [ - base Cabal gi-atk gi-cairo gi-gdk gi-gio gi-glib gi-gobject gi-gtk - gi-javascriptcore gi-soup haskell-gi - ]; - libraryHaskellDepends = [ - base bytestring containers gi-atk gi-cairo gi-gdk gi-gio gi-glib - gi-gobject gi-gtk gi-javascriptcore gi-soup haskell-gi - haskell-gi-base haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ webkitgtk ]; - description = "WebKit2 bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) webkitgtk;}; - - "gi-webkit2_4_0_27" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, gi-atk , gi-cairo, gi-gdk, gi-gio, gi-glib, gi-gobject, gi-gtk , gi-javascriptcore, gi-soup, haskell-gi, haskell-gi-base @@ -103880,7 +104002,6 @@ self: { libraryPkgconfigDepends = [ webkitgtk ]; description = "WebKit2 bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) webkitgtk;}; "gi-webkit2webextension" = callPackage @@ -103933,25 +104054,6 @@ self: { }) {inherit (pkgs) libwnck;}; "gi-xlib" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, haskell-gi - , haskell-gi-base, haskell-gi-overloading, text, transformers - , xlibsWrapper - }: - mkDerivation { - pname = "gi-xlib"; - version = "2.0.9"; - sha256 = "02n2iz30dkkfqpsc3ngpx0zxrl6fbsafzrjf0im8an783jp3vm80"; - setupHaskellDepends = [ base Cabal haskell-gi ]; - libraryHaskellDepends = [ - base bytestring containers haskell-gi haskell-gi-base - haskell-gi-overloading text transformers - ]; - libraryPkgconfigDepends = [ xlibsWrapper ]; - description = "xlib bindings"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) xlibsWrapper;}; - - "gi-xlib_2_0_10" = callPackage ({ mkDerivation, base, bytestring, Cabal, containers, haskell-gi , haskell-gi-base, haskell-gi-overloading, text, transformers , xlibsWrapper @@ -103968,7 +104070,6 @@ self: { libraryPkgconfigDepends = [ xlibsWrapper ]; description = "xlib bindings"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) xlibsWrapper;}; "giak" = callPackage @@ -104035,6 +104136,39 @@ self: { license = lib.licenses.mit; }) {}; + "ginger_0_10_2_0" = callPackage + ({ mkDerivation, aeson, aeson-pretty, base, bytestring, containers + , data-default, filepath, http-types, mtl, optparse-applicative + , parsec, process, regex-tdfa, safe, scientific, tasty, tasty-hunit + , tasty-quickcheck, text, time, transformers, unordered-containers + , utf8-string, vector, yaml + }: + mkDerivation { + pname = "ginger"; + version = "0.10.2.0"; + sha256 = "0mqwcd4l8h6gk2i1qgj99zlp0c46kvkzni14vl2k6m3iili12ir7"; + isLibrary = true; + isExecutable = true; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + aeson aeson-pretty base bytestring containers data-default filepath + http-types mtl parsec regex-tdfa safe scientific text time + transformers unordered-containers utf8-string vector + ]; + executableHaskellDepends = [ + aeson base bytestring data-default optparse-applicative process + text transformers unordered-containers utf8-string yaml + ]; + testHaskellDepends = [ + aeson base bytestring data-default mtl tasty tasty-hunit + tasty-quickcheck text time transformers unordered-containers + utf8-string + ]; + description = "An implementation of the Jinja2 template language in Haskell"; + license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + }) {}; + "gingersnap" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, deepseq , http-types, microspec, postgresql-simple, resource-pool @@ -104239,8 +104373,8 @@ self: { }: mkDerivation { pname = "git-annex"; - version = "8.20210428"; - sha256 = "0xpvhpnl600874sa392wjfd2yd9s6ps2cq2qfkzyxxf90p9fcwg8"; + version = "8.20210621"; + sha256 = "01i8mgxz4ca0c50g2w2qgr3m04l5zsw17r0cadn3kwyld662r98n"; configureFlags = [ "-fassistant" "-f-benchmark" "-fdbus" "-f-debuglocks" "-fmagicmime" "-fnetworkbsd" "-fpairing" "-fproduction" "-fs3" "-ftorrentparser" @@ -104743,8 +104877,8 @@ self: { }: mkDerivation { pname = "githash"; - version = "0.1.5.0"; - sha256 = "1m2dhmddn9k75j5wyjilbh40n7fkgi7cyic9l0k2s7g9z93yyvql"; + version = "0.1.6.0"; + sha256 = "1mcfzgvqiirlz8vc02wlvvfyf6742f3901ks8rphhabl4b4v1djl"; libraryHaskellDepends = [ base bytestring directory filepath process template-haskell ]; @@ -105462,8 +105596,8 @@ self: { }: mkDerivation { pname = "glabrous"; - version = "2.0.3"; - sha256 = "06bpazshc07rg1w06sl171k12mry708512hrdckqw7winwfrwwkh"; + version = "2.0.4"; + sha256 = "0rzfs09njlll144l05s77hs9pm9mmnb8h705xlyr5yavllkv1ypk"; libraryHaskellDepends = [ aeson aeson-pretty attoparsec base bytestring cereal cereal-text either text unordered-containers @@ -105943,6 +106077,7 @@ self: { ]; description = "Extras to interface Gloss and Accelerate"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "gloss-algorithms" = callPackage @@ -105968,6 +106103,7 @@ self: { description = "An Interface for gloss in terms of a reactive-banana Behavior"; license = lib.licenses.gpl3Only; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "gloss-devil" = callPackage @@ -108992,19 +109128,17 @@ self: { "goldplate" = callPackage ({ mkDerivation, aeson, aeson-pretty, async, base, bytestring, Diff , directory, filepath, Glob, optparse-applicative, process - , regex-pcre-builtin, text, time, unordered-containers + , regex-pcre-builtin, text, unordered-containers }: mkDerivation { pname = "goldplate"; - version = "0.1.3"; - sha256 = "109qhyq0n4w1jdz7y2hd8cjf44pikavv6mfnmf65vyfjangjq610"; - revision = "1"; - editedCabalFile = "1chrg7mfs4w4hbc0i1pdsj1350c4h3dhcv7xswn2ygq78337xxqk"; + version = "0.2.0"; + sha256 = "1f2n981676ykrv08fgdj87mj5r4841a18ywvgpc2hgapsgwbgma1"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ aeson aeson-pretty async base bytestring Diff directory filepath - Glob optparse-applicative process regex-pcre-builtin text time + Glob optparse-applicative process regex-pcre-builtin text unordered-containers ]; description = "A lightweight golden test runner"; @@ -109137,8 +109271,8 @@ self: { }: mkDerivation { pname = "google-maps-geocoding"; - version = "0.5.0.1"; - sha256 = "0cc7hhw4bqls6bckpahck5ad2pv6fzw2qkp8iym7y4cylsxvnamq"; + version = "0.7.0.0"; + sha256 = "0p6b2xyfkw073anhwwk4sdpphj3j1h24k277yc131yvyjlw4kslx"; libraryHaskellDepends = [ aeson base google-static-maps http-client servant servant-client text @@ -109267,8 +109401,8 @@ self: { }: mkDerivation { pname = "google-static-maps"; - version = "0.6.0.1"; - sha256 = "0hvkxdwfbn352q642v4n8wj4ikfp97sll87cwkgr3vb23qwmlbyy"; + version = "0.7.0.0"; + sha256 = "09ir6y13n3sk34g3nnbhv6rz6kibw1gph6fap8f9dlna1g1s1vrb"; libraryHaskellDepends = [ aeson base base64-bytestring bytedump bytestring cryptonite double-conversion http-client JuicyPixels memory network-uri @@ -109776,8 +109910,8 @@ self: { ({ mkDerivation, base, criterion, hedgehog }: mkDerivation { pname = "grab"; - version = "0.0.0.4"; - sha256 = "0yanm9ak2sw266wn9lllz086g53sra7xfncpql6403d2lj3j1jj4"; + version = "0.0.0.6"; + sha256 = "0fhindbl5ygfncbww0wqbq4bkjr9q6v0f12f0rzblz71wapshnni"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base hedgehog ]; benchmarkHaskellDepends = [ base criterion ]; @@ -109791,8 +109925,8 @@ self: { ({ mkDerivation, base, containers, grab, hedgehog, text }: mkDerivation { pname = "grab-form"; - version = "0.0.0.4"; - sha256 = "0ch8c0kfjky9s1ilrxyr27jhmvynrp61imb188rc3fv7yfr0b5n5"; + version = "0.0.0.6"; + sha256 = "18gk6p6fxvsiihlr6amvlqf9s7i4v0wi7vzpfjkc580zzvxd9c8n"; libraryHaskellDepends = [ base containers grab text ]; testHaskellDepends = [ base containers hedgehog text ]; description = "Applicative parsers for form parameter lists"; @@ -113655,6 +113789,28 @@ self: { broken = true; }) {}; + "hackage-db_2_1_0" = callPackage + ({ mkDerivation, aeson, base, bytestring, Cabal, containers + , directory, exceptions, filepath, tar, time, utf8-string + }: + mkDerivation { + pname = "hackage-db"; + version = "2.1.0"; + sha256 = "1vsc0lrbrb525frycqq0c5z846whymgcjl888gnlqd16nknbsn3l"; + revision = "1"; + editedCabalFile = "1h3x5a8xmqkkcd3h1m7z0il1vbsh2c77685y68zmyp21zb1y88hy"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + aeson base bytestring Cabal containers directory exceptions + filepath tar time utf8-string + ]; + description = "Access cabal-install's Hackage database via Data.Map"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + maintainers = with lib.maintainers; [ peti ]; + }) {}; + "hackage-db" = callPackage ({ mkDerivation, aeson, base, bytestring, Cabal, containers , directory, exceptions, filepath, tar, time, utf8-string @@ -114253,28 +114409,6 @@ self: { }) {}; "haddock-library" = callPackage - ({ mkDerivation, base, base-compat, bytestring, containers, deepseq - , directory, filepath, hspec, hspec-discover, optparse-applicative - , parsec, QuickCheck, text, transformers, tree-diff - }: - mkDerivation { - pname = "haddock-library"; - version = "1.9.0"; - sha256 = "0c37mhmvr4saw5m4snyj1nij786dwmk9kch7hafgd1xswb9k4c5c"; - libraryHaskellDepends = [ - base bytestring containers parsec text transformers - ]; - testHaskellDepends = [ - base base-compat bytestring containers deepseq directory filepath - hspec optparse-applicative parsec QuickCheck text transformers - tree-diff - ]; - testToolDepends = [ hspec-discover ]; - description = "Library exposing some functionality of Haddock"; - license = lib.licenses.bsd2; - }) {}; - - "haddock-library_1_10_0" = callPackage ({ mkDerivation, base, base-compat, bytestring, containers, deepseq , directory, filepath, hspec, hspec-discover, optparse-applicative , parsec, QuickCheck, text, transformers, tree-diff @@ -114294,7 +114428,6 @@ self: { testToolDepends = [ hspec-discover ]; description = "Library exposing some functionality of Haddock"; license = lib.licenses.bsd2; - hydraPlatforms = lib.platforms.none; }) {}; "haddock-test" = callPackage @@ -114346,8 +114479,8 @@ self: { }: mkDerivation { pname = "hadolint"; - version = "2.4.1"; - sha256 = "166jpi6bzq2j6ss652225byn6pdz8ya71fxdndlmqgsram2hrlyn"; + version = "2.5.0"; + sha256 = "0snh5sp47xqncsb19jp29kc2mjln6gpbhwxmvsqy0z9wgch0ldgb"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -114852,7 +114985,7 @@ self: { , parsec, process, QuickCheck, random, regex-tdfa, resourcet , scientific, tagsoup, tasty, tasty-golden, tasty-hunit , tasty-quickcheck, template-haskell, text, time - , time-locale-compat, unordered-containers, utillinux, vector, wai + , time-locale-compat, unordered-containers, util-linux, vector, wai , wai-app-static, warp, yaml }: mkDerivation { @@ -114876,11 +115009,11 @@ self: { base bytestring containers filepath QuickCheck tasty tasty-golden tasty-hunit tasty-quickcheck text unordered-containers yaml ]; - testToolDepends = [ utillinux ]; + testToolDepends = [ util-linux ]; description = "A static website compiler library"; license = lib.licenses.bsd3; maintainers = with lib.maintainers; [ erictapen ]; - }) {inherit (pkgs) utillinux;}; + }) {inherit (pkgs) util-linux;}; "hakyll-R" = callPackage ({ mkDerivation, base, directory, filepath, hakyll, pandoc, process @@ -114895,6 +115028,7 @@ self: { description = "A package allowing to write Hakyll blog posts in Rmd"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-agda" = callPackage @@ -114911,7 +115045,6 @@ self: { ]; description = "Wrapper to integrate literate Agda files with Hakyll"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "hakyll-alectryon" = callPackage @@ -114928,7 +115061,6 @@ self: { ]; description = "Hakyll extension for rendering Coq code using Alectryon"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "hakyll-blaze-templates" = callPackage @@ -114941,6 +115073,7 @@ self: { description = "Blaze templates for Hakyll"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-contrib" = callPackage @@ -114957,6 +115090,7 @@ self: { description = "Extra modules for the hakyll website compiler"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-contrib-csv" = callPackage @@ -114974,6 +115108,7 @@ self: { description = "Generate Html tables from Csv files"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-contrib-elm" = callPackage @@ -114993,6 +115128,7 @@ self: { description = "Compile Elm code for inclusion in Hakyll static site"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-contrib-hyphenation" = callPackage @@ -115004,7 +115140,6 @@ self: { libraryHaskellDepends = [ base hakyll hyphenation split tagsoup ]; description = "automatic hyphenation for Hakyll"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; maintainers = with lib.maintainers; [ erictapen ]; }) {}; @@ -115051,6 +115186,7 @@ self: { description = "A hakyll library that helps maintain a separate links database"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-convert" = callPackage @@ -115100,6 +115236,7 @@ self: { description = "Dhall compiler for Hakyll"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-dir-list" = callPackage @@ -115115,6 +115252,7 @@ self: { description = "Allow Hakyll to create hierarchical menues from directories"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-elm" = callPackage @@ -115144,7 +115282,6 @@ self: { executableHaskellDepends = [ base hakyll ]; testHaskellDepends = [ base ]; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "hakyll-filestore" = callPackage @@ -115159,7 +115296,6 @@ self: { ]; description = "FileStore utilities for Hakyll"; license = lib.licenses.publicDomain; - hydraPlatforms = lib.platforms.none; }) {}; "hakyll-images" = callPackage @@ -115181,7 +115317,6 @@ self: { ]; description = "Hakyll utilities to work with images"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "hakyll-ogmarkup" = callPackage @@ -115206,6 +115341,7 @@ self: { description = "Hakyll compiler for arbitrary external processes"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-sass" = callPackage @@ -115221,7 +115357,6 @@ self: { ]; description = "Hakyll SASS compiler over hsass"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "hakyll-series" = callPackage @@ -115234,6 +115369,7 @@ self: { description = "Adds series functionality to hakyll"; license = lib.licenses.mit; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-shakespeare" = callPackage @@ -115251,7 +115387,6 @@ self: { ]; description = "Hakyll Hamlet compiler"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "hakyll-shortcode" = callPackage @@ -115292,6 +115427,7 @@ self: { description = "Use shortcut-links in markdown file for Hakyll"; license = lib.licenses.mpl20; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hakyll-typescript" = callPackage @@ -115557,6 +115693,8 @@ self: { pname = "halves"; version = "0.1.0.1"; sha256 = "0mjxi7aq58k5aydslsihp66kabh0mr5wp2nngbzkvzbs0z7rrwma"; + revision = "1"; + editedCabalFile = "1llsh3c5as0vby17mdwypgyzlvp2icmxqj52686zi6bfcs2b4p26"; libraryHaskellDepends = [ base lens ]; testHaskellDepends = [ base hedgehog lens ]; description = "Split or combine data structures to and from halves, quarters, eighths"; @@ -116071,8 +116209,8 @@ self: { }: mkDerivation { pname = "hapistrano"; - version = "0.4.1.3"; - sha256 = "1sk5z0kf9ybhk17y36zf90ljn51j82pyf8rja0cv64ah9bg5zbgq"; + version = "0.4.2.0"; + sha256 = "1f23a0n2pjhacqm275k8njkln3an2x0w48kjgxlrna39mf3fdkwh"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -116663,8 +116801,8 @@ self: { }: mkDerivation { pname = "happstack-server"; - version = "7.7.0"; - sha256 = "0jyjnksgwvasnhwwn8scqms1kja4hzlbpn0lmyr6yng5n4989d0x"; + version = "7.7.1"; + sha256 = "1zxdv7nihw3kjq2fvw5cl3s27pwm5gkli3sl15iqxfm7mdxz8rm0"; libraryHaskellDepends = [ base base64-bytestring blaze-html bytestring containers directory exceptions extensible-exceptions filepath hslogger html @@ -116680,6 +116818,35 @@ self: { license = lib.licenses.bsd3; }) {}; + "happstack-server_7_7_1_1" = callPackage + ({ mkDerivation, base, base64-bytestring, blaze-html, bytestring + , containers, directory, exceptions, extensible-exceptions + , filepath, hslogger, html, HUnit, monad-control, mtl, network + , network-uri, old-locale, parsec, process, semigroups, sendfile + , syb, system-filepath, text, threads, time, transformers + , transformers-base, transformers-compat, unix, utf8-string, xhtml + , zlib + }: + mkDerivation { + pname = "happstack-server"; + version = "7.7.1.1"; + sha256 = "0nc5rnvrzl9m3pinmdq234m80qkf4jszbdqnd567f7lh09yiqw9n"; + libraryHaskellDepends = [ + base base64-bytestring blaze-html bytestring containers directory + exceptions extensible-exceptions filepath hslogger html + monad-control mtl network network-uri old-locale parsec process + semigroups sendfile syb system-filepath text threads time + transformers transformers-base transformers-compat unix utf8-string + xhtml zlib + ]; + testHaskellDepends = [ + base bytestring containers HUnit parsec zlib + ]; + description = "Web related tools and services"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "happstack-server-tls" = callPackage ({ mkDerivation, base, bytestring, extensible-exceptions , happstack-server, hslogger, HsOpenSSL, network, openssl, sendfile @@ -116751,6 +116918,7 @@ self: { ]; description = "Support for static URL routing with overlap detection for Happstack"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "happstack-util" = callPackage @@ -117035,8 +117203,8 @@ self: { }: mkDerivation { pname = "hardware-edsl"; - version = "0.1.5"; - sha256 = "112sw9z89s27fi2jmg3a61gsm3far5vd21f1vi9cx2awgfzpi3iw"; + version = "0.1.6"; + sha256 = "1n3wdzv1ag1svsnx83fcp7mk4rhs16c8gppxdc5imnknbx9kg26r"; libraryHaskellDepends = [ array base bytestring constraints containers deepseq language-vhdl mtl operational-alacarte pretty syntactic @@ -117231,8 +117399,8 @@ self: { }: mkDerivation { pname = "hasbolt"; - version = "0.1.4.5"; - sha256 = "185qh24n6j3b5awwmm92hxravb3sq40l5q8vyng74296mjc65nkw"; + version = "0.1.5.0"; + sha256 = "0q0nd8d22knf6b1xwqz3gxmpymbvlx1p20hyahd5qr1yhjgpch0b"; libraryHaskellDepends = [ base binary bytestring connection containers data-binary-ieee754 data-default mtl network text @@ -117529,15 +117697,15 @@ self: { license = lib.licenses.bsd3; }) {}; - "hashable_1_3_1_0" = callPackage + "hashable_1_3_2_0" = callPackage ({ mkDerivation, base, bytestring, deepseq, ghc-prim, HUnit , integer-gmp, QuickCheck, random, test-framework , test-framework-hunit, test-framework-quickcheck2, text, unix }: mkDerivation { pname = "hashable"; - version = "1.3.1.0"; - sha256 = "1i57iibad5gjk88yq1svi35mjcbgjmms7jzd28wva8f598x84qc0"; + version = "1.3.2.0"; + sha256 = "0dyn343wdwbm1facpcjiyd8w0s0hk23jqh7mbj108az5dx5rdgar"; libraryHaskellDepends = [ base bytestring deepseq ghc-prim integer-gmp text ]; @@ -117624,11 +117792,26 @@ self: { pname = "hashable-time"; version = "0.2.1"; sha256 = "1zw2gqagpbwq1hgx5rlvy6mhsnb15cxg3pmhawwv0ylfihmx2yxh"; + revision = "1"; + editedCabalFile = "151gxiprdlj3masa95vvrxal9nwa72n3p1y15xyj4hp7mvvl4s2l"; libraryHaskellDepends = [ base hashable time time-compat ]; description = "Hashable instances for Data.Time"; license = lib.licenses.bsd3; }) {}; + "hashable-time_0_3" = callPackage + ({ mkDerivation, base, hashable, time-compat }: + mkDerivation { + pname = "hashable-time"; + version = "0.3"; + sha256 = "15zv0pgxp7rgd6v7skhyxgyf2sd8gr1br12bpd17r650yscw9fij"; + libraryHaskellDepends = [ base time-compat ]; + testHaskellDepends = [ base hashable time-compat ]; + description = "Hashable instances for Data.Time"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "hashabler" = callPackage ({ mkDerivation, array, base, bytestring, ghc-prim, integer-gmp , primitive, template-haskell, text @@ -118330,8 +118513,7 @@ self: { doHaddock = false; description = "Cabal package script generator for Travis-CI"; license = lib.licenses.gpl3Plus; - hydraPlatforms = lib.platforms.none; - broken = true; + maintainers = with lib.maintainers; [ sternenseemann ]; }) {}; "haskell-cnc" = callPackage @@ -118641,28 +118823,6 @@ self: { }) {}; "haskell-gi" = callPackage - ({ mkDerivation, ansi-terminal, attoparsec, base, bytestring, Cabal - , cabal-doctest, containers, directory, doctest, filepath, glib - , gobject-introspection, haskell-gi-base, mtl, pretty-show, process - , regex-tdfa, safe, text, transformers, xdg-basedir, xml-conduit - }: - mkDerivation { - pname = "haskell-gi"; - version = "0.24.7"; - sha256 = "10xp6z6whfx3iad09l83mcszzj99cc9wcnvk593ypx6zhjv0r555"; - setupHaskellDepends = [ base Cabal cabal-doctest ]; - libraryHaskellDepends = [ - ansi-terminal attoparsec base bytestring Cabal containers directory - filepath haskell-gi-base mtl pretty-show process regex-tdfa safe - text transformers xdg-basedir xml-conduit - ]; - libraryPkgconfigDepends = [ glib gobject-introspection ]; - testHaskellDepends = [ base doctest process ]; - description = "Generate Haskell bindings for GObject Introspection capable libraries"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) glib; inherit (pkgs) gobject-introspection;}; - - "haskell-gi_0_25_0" = callPackage ({ mkDerivation, ansi-terminal, attoparsec, base, bytestring, Cabal , cabal-doctest, containers, directory, doctest, filepath, glib , gobject-introspection, haskell-gi-base, mtl, pretty-show, process @@ -118682,22 +118842,9 @@ self: { testHaskellDepends = [ base doctest process ]; description = "Generate Haskell bindings for GObject Introspection capable libraries"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) glib; inherit (pkgs) gobject-introspection;}; "haskell-gi-base" = callPackage - ({ mkDerivation, base, bytestring, containers, glib, text }: - mkDerivation { - pname = "haskell-gi-base"; - version = "0.24.5"; - sha256 = "0fd5bsf2bnjaq9j8zs9l5837z9x2iryivs57y96c7fx6vxxb9xai"; - libraryHaskellDepends = [ base bytestring containers text ]; - libraryPkgconfigDepends = [ glib ]; - description = "Foundation for libraries generated by haskell-gi"; - license = lib.licenses.lgpl21Only; - }) {inherit (pkgs) glib;}; - - "haskell-gi-base_0_25_0" = callPackage ({ mkDerivation, base, bytestring, containers, glib, text }: mkDerivation { pname = "haskell-gi-base"; @@ -118707,7 +118854,6 @@ self: { libraryPkgconfigDepends = [ glib ]; description = "Foundation for libraries generated by haskell-gi"; license = lib.licenses.lgpl21Only; - hydraPlatforms = lib.platforms.none; }) {inherit (pkgs) glib;}; "haskell-gi-overloading" = callPackage @@ -118850,41 +118996,45 @@ self: { ({ mkDerivation, aeson, aeson-pretty, async, base , base16-bytestring, binary, bytestring, containers , cryptohash-sha1, data-default, deepseq, directory, extra - , filepath, floskell, fourmolu, fuzzy, ghc, ghc-boot-th, ghc-paths - , ghcide, gitrev, hashable, hie-bios, hiedb, hls-brittany-plugin + , filepath, ghc, ghc-api-compat, ghc-boot-th, ghc-paths, ghcide + , gitrev, hashable, hie-bios, hiedb, hls-brittany-plugin , hls-class-plugin, hls-eval-plugin, hls-explicit-imports-plugin - , hls-haddock-comments-plugin, hls-hlint-plugin, hls-plugin-api - , hls-retrie-plugin, hls-splice-plugin, hls-stylish-haskell-plugin - , hls-tactics-plugin, hls-test-utils, hslogger, hspec-expectations - , lens, lsp, lsp-test, lsp-types, mtl, optparse-applicative - , optparse-simple, ormolu, process, regex-tdfa, safe-exceptions - , shake, sqlite-simple, temporary, text, transformers - , unordered-containers + , hls-floskell-plugin, hls-fourmolu-plugin, hls-graph + , hls-haddock-comments-plugin, hls-hlint-plugin + , hls-module-name-plugin, hls-ormolu-plugin, hls-plugin-api + , hls-pragmas-plugin, hls-refine-imports-plugin, hls-retrie-plugin + , hls-splice-plugin, hls-stylish-haskell-plugin, hls-tactics-plugin + , hls-test-utils, hslogger, hspec-expectations, lens, lsp, lsp-test + , lsp-types, mtl, optparse-applicative, optparse-simple, process + , regex-tdfa, safe-exceptions, sqlite-simple, temporary, text + , transformers, unordered-containers }: mkDerivation { pname = "haskell-language-server"; - version = "1.1.0.0"; - sha256 = "0zbr8qr097mjcsbgdkm6a8ala1ifdajmllr8basvrndn28zgi5cg"; + version = "1.2.0.0"; + sha256 = "131l21r9ahnw54x5453j7pw728z6vp3gc2zmj6wrwzz51b9v64q8"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ aeson-pretty async base base16-bytestring bytestring containers cryptohash-sha1 data-default directory extra filepath ghc ghcide - gitrev hie-bios hiedb hls-plugin-api hslogger lsp - optparse-applicative optparse-simple process safe-exceptions shake + gitrev hie-bios hiedb hls-graph hls-plugin-api hslogger lsp + optparse-applicative optparse-simple process safe-exceptions sqlite-simple text unordered-containers ]; executableHaskellDepends = [ aeson async base base16-bytestring binary bytestring containers - cryptohash-sha1 data-default deepseq directory extra filepath - floskell fourmolu fuzzy ghc ghc-boot-th ghc-paths ghcide gitrev - hashable hie-bios hiedb hls-brittany-plugin hls-class-plugin - hls-eval-plugin hls-explicit-imports-plugin - hls-haddock-comments-plugin hls-hlint-plugin hls-plugin-api - hls-retrie-plugin hls-splice-plugin hls-stylish-haskell-plugin - hls-tactics-plugin hslogger lens lsp mtl optparse-applicative - optparse-simple ormolu process regex-tdfa safe-exceptions shake - sqlite-simple temporary text transformers unordered-containers + cryptohash-sha1 data-default deepseq directory extra filepath ghc + ghc-api-compat ghc-boot-th ghc-paths ghcide gitrev hashable + hie-bios hiedb hls-brittany-plugin hls-class-plugin hls-eval-plugin + hls-explicit-imports-plugin hls-floskell-plugin hls-fourmolu-plugin + hls-graph hls-haddock-comments-plugin hls-hlint-plugin + hls-module-name-plugin hls-ormolu-plugin hls-plugin-api + hls-pragmas-plugin hls-refine-imports-plugin hls-retrie-plugin + hls-splice-plugin hls-stylish-haskell-plugin hls-tactics-plugin + hslogger lens lsp mtl optparse-applicative optparse-simple process + regex-tdfa safe-exceptions sqlite-simple temporary text + transformers unordered-containers ]; testHaskellDepends = [ aeson base bytestring containers data-default directory extra @@ -119620,8 +119770,8 @@ self: { }: mkDerivation { pname = "haskell-stack-trace-plugin"; - version = "0.1.1.1"; - sha256 = "0mm1nyhlia00vawpwcq6dda0j9d8sgd1ls4xin0s84jplw5z9hwz"; + version = "0.1.3.0"; + sha256 = "1vlqf0j88qshqkc1j688x38h4sqdkww5ya4ihaz3fy8l86wwmnvw"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base ghc ]; @@ -120847,6 +120997,30 @@ self: { license = lib.licenses.bsd3; }) {}; + "hasklepias" = callPackage + ({ mkDerivation, aeson, base, bytestring, containers, flow, hspec + , interval-algebra, lens, lens-aeson, QuickCheck, safe, text, time + , unordered-containers, vector, witherable + }: + mkDerivation { + pname = "hasklepias"; + version = "0.8.3"; + sha256 = "01lq7q9gq7b5zi2bwlc6wpj914l660cl5wlvbznimhfnkr1aqrgm"; + libraryHaskellDepends = [ + aeson base bytestring containers flow interval-algebra lens + lens-aeson QuickCheck safe text time unordered-containers vector + witherable + ]; + testHaskellDepends = [ + aeson base bytestring containers flow hspec interval-algebra lens + QuickCheck text time unordered-containers vector + ]; + description = "Define features from events"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "haskmon" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, http-streams , io-streams, time, vector @@ -120920,8 +121094,8 @@ self: { }: mkDerivation { pname = "haskoin-core"; - version = "0.20.3"; - sha256 = "0g5d6w6vwkbxf4iqx998q2c5cnhq1bav0ikksdbj98w8b7ga6v0z"; + version = "0.20.4"; + sha256 = "0mbq4ixnnjln0qjippmv57qz5p4qx3s0fyr2xj43q5gmis89m4cg"; libraryHaskellDepends = [ aeson array base base16 binary bytes bytestring cereal conduit containers cryptonite deepseq entropy hashable hspec memory mtl @@ -121058,8 +121232,8 @@ self: { }: mkDerivation { pname = "haskoin-store"; - version = "0.52.13"; - sha256 = "1ms07ka51j20xb86b3i4gca9svh2wxa4i0wb6qxbwq7n2138ck0h"; + version = "0.53.4"; + sha256 = "04q5a2hf198949z3dlswjq384ymlasq0my1a7n1v3kfr47hr1cjx"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -121104,8 +121278,8 @@ self: { }: mkDerivation { pname = "haskoin-store-data"; - version = "0.52.13"; - sha256 = "08c95grxg11kf96di27z7d72c2l7h2qzb8p5446fd91pidzgz3zb"; + version = "0.53.4"; + sha256 = "034yb730i2f2dklqk6fcygg7c1h1l0zpm0xh6zkp4a7wjb77f4jp"; libraryHaskellDepends = [ aeson base binary bytes bytestring cereal containers data-default deepseq hashable haskoin-core http-client http-types lens mtl @@ -121252,6 +121426,8 @@ self: { pname = "haskore"; version = "0.2.0.8"; sha256 = "0aflqgvkabgscpkii7aiqfffb15nc90chp4q8xrl3bp8c3i4bb5l"; + revision = "2"; + editedCabalFile = "00rbyw9401m82innh9gjrdqvzn20vy564hicqnjprs1p1j8jn97g"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -122272,7 +122448,6 @@ self: { ]; description = "A PostgreSQL backed queue"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "hasql-simple" = callPackage @@ -122346,6 +122521,26 @@ self: { license = lib.licenses.mit; }) {}; + "hasqlator-mysql" = callPackage + ({ mkDerivation, aeson, base, binary, bytestring, containers, dlist + , io-streams, megaparsec, mtl, mysql-haskell, pretty-simple + , prettyprinter, scientific, template-haskell, text, time + }: + mkDerivation { + pname = "hasqlator-mysql"; + version = "0.0.8"; + sha256 = "1ns8ckpvib53s4gvdd3pa5c0ypqw2qw2fwvxakkkd1h66xx8as08"; + libraryHaskellDepends = [ + aeson base binary bytestring containers dlist io-streams megaparsec + mtl mysql-haskell pretty-simple prettyprinter scientific + template-haskell text time + ]; + description = "composable SQL generation"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "hasqly-mysql" = callPackage ({ mkDerivation, base, binary, bytestring, dlist, mtl , mysql-haskell, scientific, text, time @@ -124866,6 +125061,28 @@ self: { license = lib.licenses.bsd3; }) {}; + "hedn_0_3_0_3" = callPackage + ({ mkDerivation, base, containers, deepseq, deriving-compat + , hedgehog, megaparsec, parser-combinators, prettyprinter + , scientific, template-haskell, text, time, uuid-types, vector + }: + mkDerivation { + pname = "hedn"; + version = "0.3.0.3"; + sha256 = "0amfsmnly9yxzv1j34ya8kq9fqd067kgklx7rswy5g7aflj3bpwl"; + libraryHaskellDepends = [ + base containers deepseq deriving-compat megaparsec + parser-combinators prettyprinter scientific template-haskell text + time uuid-types vector + ]; + testHaskellDepends = [ + base containers hedgehog megaparsec text time uuid-types vector + ]; + description = "EDN parsing and encoding"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "hedn-functor" = callPackage ({ mkDerivation, base, containers, hedn, recursion-schemes, text , vector @@ -124902,21 +125119,18 @@ self: { "heidi" = callPackage ({ mkDerivation, base, boxes, containers, criterion, exceptions - , generic-trie, generics-sop, hashable, microlens, microlens-th - , scientific, tasty, tasty-hspec, text, unordered-containers - , vector, weigh + , generics-sop, hashable, microlens, microlens-th, scientific + , tasty, tasty-hspec, text, unordered-containers, vector, weigh }: mkDerivation { pname = "heidi"; - version = "0.1.0"; - sha256 = "1l4am8pqk3xrmjmjv48jia60d2vydpj2wy0iyxqiidnc7b8p5j8m"; - revision = "1"; - editedCabalFile = "0fbx6hkxdbrhh30j2bs3zrxknrlr6z29r7srxnpsgd4n0rkdajar"; + version = "0.3.0"; + sha256 = "196v4y8ff64ivx2p1i9vxxgrpq67j0xyq1hpz5v47yq6k0fdm52n"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - base boxes containers exceptions generic-trie generics-sop hashable - microlens microlens-th scientific text unordered-containers vector + base boxes containers exceptions generics-sop hashable microlens + microlens-th scientific text unordered-containers vector ]; executableHaskellDepends = [ base exceptions hashable text unordered-containers @@ -124925,7 +125139,6 @@ self: { benchmarkHaskellDepends = [ base criterion weigh ]; description = "Tidy data in Haskell"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "hein" = callPackage @@ -125461,8 +125674,8 @@ self: { }: mkDerivation { pname = "hercules-ci-agent"; - version = "0.8.1"; - sha256 = "0f18mz2chwipjac7dc918hn54frrxqk6bvyjvzqq25agi5zh8h12"; + version = "0.8.2"; + sha256 = "0zz0s9xpi5gdma1ljfbspfysn8vw05859k159nx8lxqbivpf6bxn"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -125495,7 +125708,7 @@ self: { conduit containers exceptions filepath hercules-ci-api-agent hercules-ci-api-core hercules-ci-cnix-store hspec katip lifted-async lifted-base monad-control process protolude - safe-exceptions text transformers-base unliftio-core + safe-exceptions temporary text transformers-base unliftio-core ]; description = "Runs Continuous Integration tasks on your machines"; license = lib.licenses.asl20; @@ -125511,8 +125724,8 @@ self: { }: mkDerivation { pname = "hercules-ci-api"; - version = "0.6.0.1"; - sha256 = "1c9dvj9vv4rm0ndmgfm9s4qfpjbs2ly98r06bl0xv550anik7kqj"; + version = "0.7.0.0"; + sha256 = "0c8mhmhz89fw0s65a669cpcldqv0g01z9s2343ksv2ykaqz5whi9"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -125543,8 +125756,8 @@ self: { }: mkDerivation { pname = "hercules-ci-api-agent"; - version = "0.3.1.0"; - sha256 = "0p1xlzwhaz6ycjzmadnlmr7fvz9iar9b7qzz867xxvix6p8w2nj6"; + version = "0.4.0.0"; + sha256 = "05jdxlr5afr9chayc6frbi9hhagb9qknfdnd2k25cimd7h2syi7r"; libraryHaskellDepends = [ aeson base base64-bytestring-type bytestring containers cookie deepseq exceptions hashable hercules-ci-api-core http-api-data @@ -125571,8 +125784,8 @@ self: { }: mkDerivation { pname = "hercules-ci-api-core"; - version = "0.1.2.0"; - sha256 = "1p2vv5dviac73qi42x7kf09wgc3qjdkpldn7yj5vhmxhcnj7yj6x"; + version = "0.1.3.0"; + sha256 = "1xs5als5fw0fj76rgmygndpw1vfs9bj4lyr8hfgkv4vfbdrmkj2y"; libraryHaskellDepends = [ aeson base bytestring containers cookie deepseq exceptions hashable http-api-data http-media katip lens lifted-base memory @@ -125599,8 +125812,8 @@ self: { }: mkDerivation { pname = "hercules-ci-cli"; - version = "0.2.0"; - sha256 = "0fxsx31b6m9hxcpymixmfpvj1k569kzbxd2jvm8kzda073hljsbm"; + version = "0.2.1"; + sha256 = "1lbvc2n1mjrnvnpnqvgjd1zbsa96zdpvjhbawfd8rw63ih8l451z"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -125629,15 +125842,16 @@ self: { "hercules-ci-cnix-expr" = callPackage ({ mkDerivation, aeson, base, bdw-gc, boost, bytestring, conduit , containers, exceptions, hercules-ci-cnix-store, inline-c - , inline-c-cpp, nix, protolude, text + , inline-c-cpp, nix, protolude, text, unliftio }: mkDerivation { pname = "hercules-ci-cnix-expr"; - version = "0.1.0.0"; - sha256 = "1f9pq6z5xvmq7hd136dshazybazydsmah5f5h8w82yi12ccyqlaz"; + version = "0.2.0.0"; + sha256 = "1z76ckxb629lbwa96axigan8xax6wd9w8p37isyisqwvk1a1gsc7"; libraryHaskellDepends = [ aeson base bytestring conduit containers exceptions hercules-ci-cnix-store inline-c inline-c-cpp protolude text + unliftio ]; librarySystemDepends = [ boost ]; libraryPkgconfigDepends = [ bdw-gc nix ]; @@ -125648,18 +125862,25 @@ self: { "hercules-ci-cnix-store" = callPackage ({ mkDerivation, base, boost, bytestring, conduit, containers - , inline-c, inline-c-cpp, nix, protolude, unliftio-core + , exceptions, hspec, hspec-discover, inline-c, inline-c-cpp, nix + , protolude, template-haskell, temporary, text, unliftio-core + , vector }: mkDerivation { pname = "hercules-ci-cnix-store"; - version = "0.1.1.0"; - sha256 = "1lvlilhfkyx3i4fp0azjx4gm2iwm6hkjrg6kc5faifw7knfivinj"; + version = "0.2.0.1"; + sha256 = "1vd7wy23glgxs823c8c1754miwpmrfscsfdn74nyx31gci4jhqgx"; libraryHaskellDepends = [ base bytestring conduit containers inline-c inline-c-cpp protolude - unliftio-core + template-haskell unliftio-core vector ]; librarySystemDepends = [ boost ]; libraryPkgconfigDepends = [ nix ]; + testHaskellDepends = [ + base bytestring containers exceptions hspec inline-c inline-c-cpp + protolude temporary text + ]; + testToolDepends = [ hspec-discover ]; description = "Haskell bindings for Nix's libstore"; license = lib.licenses.asl20; maintainers = with lib.maintainers; [ roberth ]; @@ -125697,8 +125918,8 @@ self: { }: mkDerivation { pname = "heredocs"; - version = "0.2.0.0"; - sha256 = "1649vhzymizmmi3ggmqxyq4b0fhrpipj4ljy1w7hca2wyh4jm1yw"; + version = "0.2.1.1"; + sha256 = "10vxd4f77vj2q79nri2zvjrgp1h8q058zp4xanh18pwpwqz8pbv6"; libraryHaskellDepends = [ base bytestring doctest parsec template-haskell text ]; @@ -126061,8 +126282,8 @@ self: { }: mkDerivation { pname = "hevm"; - version = "0.44.1"; - sha256 = "1ygrksnqav1cw9pq1x2xi0na5fxy0phyc0v48nkzpis868gy0b97"; + version = "0.46.0"; + sha256 = "1pqs4hcjy1gipdp63d8jcy035n96rfx14x0s67ihmh16s11i85bz"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -126866,19 +127087,20 @@ self: { , nonempty-vector, optparse-applicative, primitive, QuickCheck , quickcheck-instances, random, reflection, semigroupoids , semigroups, tasty-bench, template-haskell, text, vector - , vector-algorithms, vector-builder, vector-circular, vinyl, yaml + , vector-algorithms, vector-builder, vector-circular, vinyl + , witherable, yaml }: mkDerivation { pname = "hgeometry"; - version = "0.12.0.2"; - sha256 = "0l14qvsh1aas414zmwwliq7d7cbpjnrs33mfkfpna6svxw5d0phi"; + version = "0.12.0.4"; + sha256 = "1by6x3525hzfk2yr2rkwz4c0vq95x32f5c3bc0sr8kl6yrbabghw"; libraryHaskellDepends = [ aeson base bifunctors bytestring containers data-clist deepseq dlist fingertree fixed-vector hashable hgeometry-combinatorial hspec lens linear MonadRandom mtl nonempty-vector primitive QuickCheck quickcheck-instances random reflection semigroupoids semigroups template-haskell text vector vector-algorithms - vector-builder vector-circular vinyl yaml + vector-builder vector-circular vinyl witherable yaml ]; testHaskellDepends = [ base doctest doctest-discover QuickCheck quickcheck-instances @@ -126901,12 +127123,12 @@ self: { , MonadRandom, mtl, nonempty-vector, primitive, QuickCheck , quickcheck-instances, random, reflection, semigroupoids , semigroups, template-haskell, text, unordered-containers, vector - , vector-builder, vector-circular, vinyl, yaml + , vector-builder, vector-circular, vinyl, witherable, yaml }: mkDerivation { pname = "hgeometry-combinatorial"; - version = "0.12.0.2"; - sha256 = "1ha9v1imwr7584mzxaba8mplsnb0d02j7bhs2knl03q72aaan4jq"; + version = "0.12.0.3"; + sha256 = "0sfng68pirghrnqflxnvysg8x3pnpbwrbc70xsj87gc257adfla9"; enableSeparateDataOutput = true; libraryHaskellDepends = [ aeson array base bifunctors bytestring containers contravariant @@ -126914,7 +127136,7 @@ self: { math-functions MonadRandom mtl nonempty-vector primitive QuickCheck quickcheck-instances random reflection semigroupoids semigroups template-haskell text unordered-containers vector vector-builder - vector-circular vinyl yaml + vector-circular vinyl witherable yaml ]; testHaskellDepends = [ approximate-equality base bytestring containers data-clist deepseq @@ -126937,8 +127159,8 @@ self: { }: mkDerivation { pname = "hgeometry-ipe"; - version = "0.11.0.0"; - sha256 = "0h78rsxc281wxmg27zxzzak0k15mv61i146gzafihrdg9hpbw1lk"; + version = "0.12.0.0"; + sha256 = "0hljjl2812i9nicajc0xb53wfkq7q3hsicdqdj5z8kr8zrf09lbh"; enableSeparateDataOutput = true; libraryHaskellDepends = [ aeson base bifunctors bytestring colour containers data-clist @@ -127224,6 +127446,8 @@ self: { ]; description = "Happy Haskell Programming"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hhwloc" = callPackage @@ -127467,8 +127691,8 @@ self: { }: mkDerivation { pname = "hie-compat"; - version = "0.1.0.0"; - sha256 = "00wnb7ylahglw167n2n1b2a6b0b75ay167zzrl10jsskivxwx3h3"; + version = "0.2.0.0"; + sha256 = "029h465wfknjdjk4yqq10b9krya9qplh8zzvmnwp9hf5rlr9awc3"; libraryHaskellDepends = [ array base bytestring containers directory filepath ghc ghc-boot transformers @@ -128093,6 +128317,26 @@ self: { broken = true; }) {}; + "hindley-milner-type-check" = callPackage + ({ mkDerivation, base, containers, data-fix, deepseq + , deriving-compat, dlist, mtl, prettyprinter, tasty, tasty-hunit + , text + }: + mkDerivation { + pname = "hindley-milner-type-check"; + version = "0.1.1.0"; + sha256 = "1xikcxhv59skwx9gjki5zhbcqgjp0lhn2jmf99sls8fwcznbvqj9"; + libraryHaskellDepends = [ + base containers data-fix deepseq deriving-compat dlist mtl + prettyprinter text + ]; + testHaskellDepends = [ + base containers data-fix prettyprinter tasty tasty-hunit text + ]; + description = "Type inference for Hindley-Milner based languages"; + license = lib.licenses.mit; + }) {}; + "hinduce-associations-apriori" = callPackage ({ mkDerivation, base, containers, deepseq, hinduce-missingh , parallel, vector @@ -129551,20 +129795,24 @@ self: { "hledger-stockquotes" = callPackage ({ mkDerivation, aeson, base, bytestring, cmdargs, containers - , hedgehog, hledger-lib, req, safe, scientific, split, tasty - , tasty-hedgehog, tasty-hunit, text, time, unordered-containers + , directory, hedgehog, hledger-lib, raw-strings-qq, req, safe + , safe-exceptions, scientific, split, tasty, tasty-hedgehog + , tasty-hunit, text, time, unordered-containers, xdg-basedir, yaml }: mkDerivation { pname = "hledger-stockquotes"; - version = "0.1.1.0"; - sha256 = "1srgl70zsixbfgmh22psg7q4wqfiay2jiybyvml42iv712n7z8xx"; + version = "0.1.2.0"; + sha256 = "064q6qz6rrahk9ri5hr1y6n17nmd4l124xb3l8q5rvm81x3hzp3x"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ aeson base bytestring containers hledger-lib req safe scientific split text time unordered-containers ]; - executableHaskellDepends = [ base bytestring cmdargs text time ]; + executableHaskellDepends = [ + aeson base bytestring cmdargs directory raw-strings-qq + safe-exceptions text time xdg-basedir yaml + ]; testHaskellDepends = [ base hedgehog tasty tasty-hedgehog tasty-hunit ]; @@ -129630,6 +129878,8 @@ self: { pname = "hledger-web"; version = "1.21"; sha256 = "0ivszqcypw0j2wn4r7fv7dqm1pvr0b1y6rqpxagzyk8cxn3ic9g2"; + revision = "1"; + editedCabalFile = "1hnw10ibhbafbsfj5lzlxwjg4cjnqr5bb51n6mqbi30qqabgq78x"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -129739,7 +129989,7 @@ self: { license = lib.licenses.mit; }) {inherit (pkgs) libsass;}; - "hlint_3_2_7" = callPackage + "hlint" = callPackage ({ mkDerivation, aeson, ansi-terminal, base, bytestring, cmdargs , containers, cpphs, data-default, directory, extra, file-embed , filepath, filepattern, ghc, ghc-boot, ghc-boot-th @@ -129762,11 +130012,10 @@ self: { executableHaskellDepends = [ base ]; description = "Source code suggestions"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; maintainers = with lib.maintainers; [ maralorn ]; }) {}; - "hlint" = callPackage + "hlint_3_3_1" = callPackage ({ mkDerivation, aeson, ansi-terminal, base, bytestring, cmdargs , containers, cpphs, data-default, directory, extra, file-embed , filepath, filepattern, ghc-lib-parser, ghc-lib-parser-ex @@ -129789,6 +130038,7 @@ self: { executableHaskellDepends = [ base ]; description = "Source code suggestions"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; maintainers = with lib.maintainers; [ maralorn ]; }) {}; @@ -129888,6 +130138,7 @@ self: { ]; description = "High-level Redis Database"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; }) {}; "hlrdb-core" = callPackage @@ -129906,6 +130157,8 @@ self: { ]; description = "High-level Redis Database Core API"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hls" = callPackage @@ -129930,6 +130183,8 @@ self: { pname = "hls-brittany-plugin"; version = "1.0.0.1"; sha256 = "1lfhgvxs0bvs67raxalvj8pr4qln1yvi7i7wlp33gpk2x89bwaqy"; + revision = "3"; + editedCabalFile = "0d7pn634gpksl49hp3bfds52zhc80943bb2l5cvlbaf3phlsfskc"; libraryHaskellDepends = [ base brittany filepath ghc ghc-boot-th ghcide hls-plugin-api lens lsp-types text transformers @@ -129940,22 +130195,20 @@ self: { }) {}; "hls-class-plugin" = callPackage - ({ mkDerivation, aeson, base, bytestring, containers, filepath, ghc - , ghc-exactprint, ghcide, hls-plugin-api, hls-test-utils, lens, lsp - , lsp-test, lsp-types, shake, text, transformers - , unordered-containers + ({ mkDerivation, aeson, base, containers, filepath, ghc + , ghc-api-compat, ghc-exactprint, ghcide, hls-plugin-api + , hls-test-utils, lens, lsp, lsp-types, text, transformers }: mkDerivation { pname = "hls-class-plugin"; - version = "1.0.0.1"; - sha256 = "0s9pkdcgvfb9qhj9qjy6bygdyshanczcn9apq3qcw8yznl1zqilc"; + version = "1.0.0.2"; + sha256 = "0z6774vmfafgr3z5h98ls5sssax15psa2dq5sf8bcqm29y3g3zvi"; libraryHaskellDepends = [ - aeson base containers ghc ghc-exactprint ghcide hls-plugin-api lens - lsp shake text transformers unordered-containers + aeson base containers ghc ghc-api-compat ghc-exactprint ghcide + hls-plugin-api lens lsp text transformers ]; testHaskellDepends = [ - base bytestring filepath hls-test-utils lens lsp-test lsp-types - text + base filepath hls-test-utils lens lsp-types ]; description = "Class/instance management plugin for Haskell Language Server"; license = lib.licenses.asl20; @@ -129963,26 +130216,25 @@ self: { "hls-eval-plugin" = callPackage ({ mkDerivation, aeson, base, containers, deepseq, Diff, directory - , dlist, extra, filepath, ghc, ghc-boot-th, ghc-paths, ghcide - , hashable, hls-plugin-api, hls-test-utils, lens, lsp, lsp-test - , lsp-types, megaparsec, mtl, parser-combinators, pretty-simple - , QuickCheck, safe-exceptions, shake, temporary, text, time + , dlist, extra, filepath, ghc, ghc-api-compat, ghc-boot-th + , ghc-paths, ghcide, hashable, hls-plugin-api, hls-test-utils, lens + , lsp, lsp-types, megaparsec, mtl, parser-combinators + , pretty-simple, QuickCheck, safe-exceptions, temporary, text, time , transformers, unliftio, unordered-containers }: mkDerivation { pname = "hls-eval-plugin"; - version = "1.1.0.0"; - sha256 = "138l49a8y0g7yk29xdjs0jv0xmz3y8lvig45g944spj3xi8snpfx"; + version = "1.1.1.0"; + sha256 = "167vmz7jl09lkayjf6g0inn2q5i1h3gs5vl6xpdg4cbvd8srdvbs"; libraryHaskellDepends = [ aeson base containers deepseq Diff directory dlist extra filepath - ghc ghc-boot-th ghc-paths ghcide hashable hls-plugin-api lens lsp - lsp-types megaparsec mtl parser-combinators pretty-simple - QuickCheck safe-exceptions shake temporary text time transformers - unliftio unordered-containers + ghc ghc-api-compat ghc-boot-th ghc-paths ghcide hashable + hls-plugin-api lens lsp lsp-types megaparsec mtl parser-combinators + pretty-simple QuickCheck safe-exceptions temporary text time + transformers unliftio unordered-containers ]; testHaskellDepends = [ - aeson base directory extra filepath hls-test-utils lens lsp-test - lsp-types text + aeson base directory extra filepath hls-test-utils lens lsp-types ]; description = "Eval plugin for Haskell Language Server"; license = lib.licenses.asl20; @@ -130008,37 +130260,20 @@ self: { }) {}; "hls-explicit-imports-plugin" = callPackage - ({ mkDerivation, aeson, base, containers, deepseq, ghc, ghcide - , hls-plugin-api, lsp, lsp-types, shake, text, unordered-containers - }: - mkDerivation { - pname = "hls-explicit-imports-plugin"; - version = "1.0.0.1"; - sha256 = "1ygs667pkc3zn66yqz6ssrxifhrc906sddmcgjnkprk7zappk2nc"; - libraryHaskellDepends = [ - aeson base containers deepseq ghc ghcide hls-plugin-api lsp - lsp-types shake text unordered-containers - ]; - description = "Explicit imports plugin for Haskell Language Server"; - license = lib.licenses.asl20; - }) {}; - - "hls-explicit-imports-plugin_1_0_0_2" = callPackage - ({ mkDerivation, aeson, base, containers, deepseq, ghc, ghcide - , hls-graph, hls-plugin-api, lsp, lsp-types, text + ({ mkDerivation, aeson, base, containers, deepseq, ghc + , ghc-api-compat, ghcide, hls-graph, hls-plugin-api, lsp, text , unordered-containers }: mkDerivation { pname = "hls-explicit-imports-plugin"; - version = "1.0.0.2"; - sha256 = "1ga7phiy7i6kmin0zi0dykbkv29vh46hzrn0bkvfqjkrb41mbi8q"; + version = "1.0.0.3"; + sha256 = "0sh4mimx76n6nzlz0nxa1z5q9ga8g268lkncqz4p0nbc54y070hh"; libraryHaskellDepends = [ - aeson base containers deepseq ghc ghcide hls-graph hls-plugin-api - lsp lsp-types text unordered-containers + aeson base containers deepseq ghc ghc-api-compat ghcide hls-graph + hls-plugin-api lsp text unordered-containers ]; description = "Explicit imports plugin for Haskell Language Server"; license = lib.licenses.asl20; - hydraPlatforms = lib.platforms.none; }) {}; "hls-floskell-plugin" = callPackage @@ -130049,47 +130284,39 @@ self: { pname = "hls-floskell-plugin"; version = "1.0.0.0"; sha256 = "0wf4483a4xhvynqqgj6gf1qg5nv9rv4gv9rm2hwsbjq123bs0wy8"; + revision = "1"; + editedCabalFile = "120ai8hswj310sv098j1b8dzpkzmjyphyxqnc1gszqds3qx588fj"; libraryHaskellDepends = [ base floskell ghcide hls-plugin-api lsp-types text transformers ]; testHaskellDepends = [ base hls-test-utils text ]; description = "Integration with the Floskell code formatter"; license = lib.licenses.asl20; - hydraPlatforms = lib.platforms.none; - broken = true; }) {}; "hls-fourmolu-plugin" = callPackage - ({ mkDerivation, aeson, base, bytestring, containers, data-default - , extra, filepath, fourmolu, ghc, ghc-boot-th, ghcide - , hls-plugin-api, hls-test-utils, hspec-expectations, lens, lsp - , lsp-test, lsp-types, text, unordered-containers + ({ mkDerivation, base, filepath, fourmolu, ghc, ghc-boot-th, ghcide + , hls-plugin-api, hls-test-utils, lens, lsp, lsp-test, text }: mkDerivation { pname = "hls-fourmolu-plugin"; - version = "1.0.0.0"; - sha256 = "1x1v9jjy80w05cg2yl0nzk3h97q16bymrqy59g1s0lzihg3wizs7"; + version = "1.0.0.1"; + sha256 = "039vvbzj583kxf04d9wjam6x7pjs7hv13ysa1rapsj5san0r73y7"; libraryHaskellDepends = [ - base extra filepath fourmolu ghc ghc-boot-th ghcide hls-plugin-api - lens lsp lsp-types text - ]; - testHaskellDepends = [ - aeson base bytestring containers data-default filepath ghcide - hls-plugin-api hls-test-utils hspec-expectations lens lsp-test - lsp-types text unordered-containers + base filepath fourmolu ghc ghc-boot-th ghcide hls-plugin-api lens + lsp text ]; + testHaskellDepends = [ base filepath hls-test-utils lsp-test ]; description = "Integration with the Fourmolu code formatter"; license = lib.licenses.asl20; - hydraPlatforms = lib.platforms.none; - broken = true; }) {}; "hls-graph" = callPackage ({ mkDerivation, base, bytestring, shake, unordered-containers }: mkDerivation { pname = "hls-graph"; - version = "1.3.0.0"; - sha256 = "0mz9443jljwgi2zd6gafixfp2k8gpnrn5269qb9bjd5p4ai0bbp7"; + version = "1.4.0.0"; + sha256 = "0x54lli368wncwb41klg7jpkbzm219b417aar50mgw8igwmbzqwf"; libraryHaskellDepends = [ base bytestring shake unordered-containers ]; @@ -130098,21 +130325,19 @@ self: { }) {}; "hls-haddock-comments-plugin" = callPackage - ({ mkDerivation, base, bytestring, containers, filepath, ghc - , ghc-exactprint, ghcide, hls-plugin-api, hls-test-utils, lsp-types - , text, unordered-containers + ({ mkDerivation, base, containers, filepath, ghc, ghc-exactprint + , ghcide, hls-plugin-api, hls-test-utils, lsp-types, text + , unordered-containers }: mkDerivation { pname = "hls-haddock-comments-plugin"; - version = "1.0.0.1"; - sha256 = "1qny8y52myd3ic893wxapbqhfdcdbil8acky91lfcylr9141154i"; + version = "1.0.0.2"; + sha256 = "09gfvzz56vz0qzn1md2p0i6rdzf7v9nwm78lcw66asblq485jac6"; libraryHaskellDepends = [ base containers ghc ghc-exactprint ghcide hls-plugin-api lsp-types text unordered-containers ]; - testHaskellDepends = [ - base bytestring filepath hls-test-utils text - ]; + testHaskellDepends = [ base filepath hls-test-utils text ]; description = "Haddock comments plugin for Haskell Language Server"; license = lib.licenses.asl20; }) {}; @@ -130120,61 +130345,78 @@ self: { "hls-hlint-plugin" = callPackage ({ mkDerivation, aeson, apply-refact, base, binary, bytestring , containers, data-default, deepseq, Diff, directory, extra - , filepath, ghc, ghc-exactprint, ghcide, hashable, hlint - , hls-plugin-api, hslogger, lens, lsp, regex-tdfa, shake, temporary - , text, transformers, unordered-containers + , filepath, ghc, ghc-exactprint, ghc-lib, ghc-lib-parser-ex, ghcide + , hashable, hlint, hls-plugin-api, hslogger, lens, lsp, regex-tdfa + , temporary, text, transformers, unordered-containers }: mkDerivation { pname = "hls-hlint-plugin"; - version = "1.0.0.2"; - sha256 = "1qi654azf4l24sc7zaimbxm7z59xfvdvn33fsa5d8y7910w17d73"; + version = "1.0.1.0"; + sha256 = "0wy6mw3i5mssjg9bf0gn5411yvqzlxd63s0amrg0yci6nx78nb8p"; libraryHaskellDepends = [ aeson apply-refact base binary bytestring containers data-default - deepseq Diff directory extra filepath ghc ghc-exactprint ghcide - hashable hlint hls-plugin-api hslogger lens lsp regex-tdfa shake - temporary text transformers unordered-containers + deepseq Diff directory extra filepath ghc ghc-exactprint ghc-lib + ghc-lib-parser-ex ghcide hashable hlint hls-plugin-api hslogger + lens lsp regex-tdfa temporary text transformers + unordered-containers ]; description = "Hlint integration plugin with Haskell Language Server"; license = lib.licenses.asl20; }) {}; - "hls-plugin-api" = callPackage - ({ mkDerivation, aeson, base, containers, data-default - , dependent-map, dependent-sum, Diff, dlist, hashable, hslogger - , lens, lsp, opentelemetry, process, regex-tdfa, shake, text, unix + "hls-module-name-plugin" = callPackage + ({ mkDerivation, aeson, base, directory, filepath, ghcide + , hls-plugin-api, hls-test-utils, lsp, text, transformers , unordered-containers }: mkDerivation { - pname = "hls-plugin-api"; - version = "1.1.0.0"; - sha256 = "1i18a5gxa409882zpviy4paldaq43j4z1zmgr9mag2mn64vplrxy"; + pname = "hls-module-name-plugin"; + version = "1.0.0.0"; + sha256 = "1a41zn1k4xga9v8xqly2jbi2i11zy05cgs60b7j9fasmm991vkxb"; libraryHaskellDepends = [ - aeson base containers data-default dependent-map dependent-sum Diff - dlist hashable hslogger lens lsp opentelemetry process regex-tdfa - shake text unix unordered-containers + aeson base directory filepath ghcide hls-plugin-api lsp text + transformers unordered-containers ]; - description = "Haskell Language Server API for plugin communication"; + testHaskellDepends = [ base filepath hls-test-utils ]; + description = "Module name plugin for Haskell Language Server"; license = lib.licenses.asl20; }) {}; - "hls-plugin-api_1_1_0_1" = callPackage + "hls-ormolu-plugin" = callPackage + ({ mkDerivation, base, filepath, ghc, ghc-boot-th, ghcide + , hls-plugin-api, hls-test-utils, lens, lsp, lsp-types, ormolu + , text + }: + mkDerivation { + pname = "hls-ormolu-plugin"; + version = "1.0.0.0"; + sha256 = "1iiq1m69jqrv28nzcrp9j70qvi21gsl9v9kjx0nkcdlbqzybfrfr"; + libraryHaskellDepends = [ + base filepath ghc ghc-boot-th ghcide hls-plugin-api lens lsp ormolu + text + ]; + testHaskellDepends = [ base filepath hls-test-utils lsp-types ]; + description = "Integration with the Ormolu code formatter"; + license = lib.licenses.asl20; + }) {}; + + "hls-plugin-api" = callPackage ({ mkDerivation, aeson, base, containers, data-default - , dependent-map, dependent-sum, Diff, dlist, hashable, hls-graph - , hslogger, lens, lsp, opentelemetry, process, regex-tdfa, text - , unix, unordered-containers + , dependent-map, dependent-sum, Diff, dlist, ghc, ghc-api-compat + , hashable, hls-graph, hslogger, lens, lsp, opentelemetry, process + , regex-tdfa, text, unix, unordered-containers }: mkDerivation { pname = "hls-plugin-api"; - version = "1.1.0.1"; - sha256 = "0xxkpaqnzm39blgaa2f9v35pwnp8rx3jbmgysnsnb9nchnjprg9z"; + version = "1.1.0.2"; + sha256 = "1x49h8087x3fynagm4na72lyqyy58bb33kcrzkfcpbr3lsb8k455"; libraryHaskellDepends = [ aeson base containers data-default dependent-map dependent-sum Diff - dlist hashable hls-graph hslogger lens lsp opentelemetry process - regex-tdfa text unix unordered-containers + dlist ghc ghc-api-compat hashable hls-graph hslogger lens lsp + opentelemetry process regex-tdfa text unix unordered-containers ]; description = "Haskell Language Server API for plugin communication"; license = lib.licenses.asl20; - hydraPlatforms = lib.platforms.none; }) {}; "hls-pragmas-plugin" = callPackage @@ -130186,6 +130428,8 @@ self: { pname = "hls-pragmas-plugin"; version = "1.0.0.0"; sha256 = "1zkq95dklc6sdhczgr6l2hdkkrbrjy3zwp0qfz3qvf55gpxspzzs"; + revision = "1"; + editedCabalFile = "0xkq857i68s58101x8dc8ynvnkhjp2f8lfddg2cjkycbwhfj42cc"; libraryHaskellDepends = [ base extra fuzzy ghcide hls-plugin-api lens lsp text transformers unordered-containers @@ -130195,66 +130439,80 @@ self: { ]; description = "Pragmas plugin for Haskell Language Server"; license = lib.licenses.asl20; - hydraPlatforms = lib.platforms.none; - broken = true; + }) {}; + + "hls-refine-imports-plugin" = callPackage + ({ mkDerivation, aeson, base, containers, deepseq, filepath, ghc + , ghcide, hls-explicit-imports-plugin, hls-graph, hls-plugin-api + , hls-test-utils, lsp, text, unordered-containers + }: + mkDerivation { + pname = "hls-refine-imports-plugin"; + version = "1.0.0.0"; + sha256 = "16dn7lnsam10rvazkslrw81qahn2i2yghdbi9pdjdzd3l3nrcyl9"; + libraryHaskellDepends = [ + aeson base containers deepseq ghc ghcide + hls-explicit-imports-plugin hls-graph hls-plugin-api lsp text + unordered-containers + ]; + testHaskellDepends = [ base filepath hls-test-utils text ]; + description = "Refine imports plugin for Haskell Language Server"; + license = lib.licenses.asl20; }) {}; "hls-retrie-plugin" = callPackage ({ mkDerivation, aeson, base, containers, deepseq, directory, extra - , ghc, ghcide, hashable, hls-plugin-api, lsp, lsp-types, retrie - , safe-exceptions, shake, text, transformers, unordered-containers + , ghc, ghc-api-compat, ghcide, hashable, hls-plugin-api, lsp + , lsp-types, retrie, safe-exceptions, text, transformers + , unordered-containers }: mkDerivation { pname = "hls-retrie-plugin"; - version = "1.0.0.2"; - sha256 = "0jw1q0dk5jl80wbyvi1a6vszj9x3s7d2bnsbnyycbh4zgl33agwb"; - revision = "1"; - editedCabalFile = "03r3cb93493hr4rbd8n1ip63myssfycyijg2507kcmsly39i2qkz"; + version = "1.0.1.0"; + sha256 = "0kfip2fqjbr9qxg749ikdj42zgnchwjrp5ch84xr5z8k7hmlnw4z"; libraryHaskellDepends = [ - aeson base containers deepseq directory extra ghc ghcide hashable - hls-plugin-api lsp lsp-types retrie safe-exceptions shake text - transformers unordered-containers + aeson base containers deepseq directory extra ghc ghc-api-compat + ghcide hashable hls-plugin-api lsp lsp-types retrie safe-exceptions + text transformers unordered-containers ]; description = "Retrie integration plugin for Haskell Language Server"; license = lib.licenses.asl20; }) {}; "hls-splice-plugin" = callPackage - ({ mkDerivation, aeson, base, containers, directory, dlist, extra - , filepath, foldl, ghc, ghc-exactprint, ghcide, hls-plugin-api - , hls-test-utils, lens, lsp, retrie, shake, syb, text, transformers + ({ mkDerivation, aeson, base, containers, dlist, extra, filepath + , foldl, ghc, ghc-exactprint, ghcide, hls-plugin-api + , hls-test-utils, lens, lsp, retrie, syb, text, transformers , unliftio-core, unordered-containers }: mkDerivation { pname = "hls-splice-plugin"; - version = "1.0.0.2"; - sha256 = "15vg5dmssd54dazipc82sgkbc399mnfydc8y8i2i6lhz3hsgvpg1"; + version = "1.0.0.3"; + sha256 = "0v5m6h4pb2piihjyldy0nm6zl8iaw34gp6yqicbqkryinz0mb4pg"; libraryHaskellDepends = [ aeson base containers dlist extra foldl ghc ghc-exactprint ghcide - hls-plugin-api lens lsp retrie shake syb text transformers - unliftio-core unordered-containers - ]; - testHaskellDepends = [ - base directory extra filepath hls-test-utils text + hls-plugin-api lens lsp retrie syb text transformers unliftio-core + unordered-containers ]; + testHaskellDepends = [ base filepath hls-test-utils text ]; description = "HLS Plugin to expand TemplateHaskell Splices and QuasiQuotes"; license = lib.licenses.asl20; }) {}; "hls-stylish-haskell-plugin" = callPackage - ({ mkDerivation, base, bytestring, directory, filepath, ghc - , ghc-boot-th, ghcide, hls-plugin-api, hls-test-utils, lsp-types - , mtl, stylish-haskell, text + ({ mkDerivation, base, directory, filepath, ghc, ghc-boot-th + , ghcide, hls-plugin-api, hls-test-utils, lsp-types + , stylish-haskell, text }: mkDerivation { pname = "hls-stylish-haskell-plugin"; - version = "1.0.0.0"; - sha256 = "1f2banm7lbl2grqrm0d9dnhk5fimxqan3xlsl4hjyqgy42xqqai2"; + version = "1.0.0.1"; + sha256 = "1dkgvh169mf0s0vnyfgb965k393hm622cd2ssl6clgbaq2q20qlf"; libraryHaskellDepends = [ base directory filepath ghc ghc-boot-th ghcide hls-plugin-api - lsp-types mtl stylish-haskell text + lsp-types stylish-haskell text ]; - testHaskellDepends = [ base bytestring hls-test-utils text ]; + testHaskellDepends = [ base filepath hls-test-utils ]; description = "Integration with the Stylish Haskell code formatter"; license = lib.licenses.asl20; }) {}; @@ -130262,20 +130520,22 @@ self: { "hls-tactics-plugin" = callPackage ({ mkDerivation, aeson, base, containers, deepseq, directory, extra , filepath, fingertree, generic-lens, ghc, ghc-boot-th - , ghc-exactprint, ghc-source-gen, ghcide, hls-plugin-api - , hls-test-utils, hspec, hspec-discover, hspec-expectations, lens - , lsp, lsp-types, mtl, QuickCheck, refinery, retrie, shake, syb - , tasty-hspec, tasty-hunit, text, transformers + , ghc-exactprint, ghc-source-gen, ghcide, hls-graph, hls-plugin-api + , hls-test-utils, hspec, hspec-discover, hspec-expectations + , hyphenation, lens, lsp, lsp-types, megaparsec, mtl + , parser-combinators, prettyprinter, QuickCheck, refinery, retrie + , syb, tasty-hspec, tasty-hunit, text, transformers , unordered-containers }: mkDerivation { pname = "hls-tactics-plugin"; - version = "1.1.0.0"; - sha256 = "13qysl6dwrn15kn310r04g1yv7jj9xhar659lrc8h230c4khn2qv"; + version = "1.2.0.0"; + sha256 = "0djyskzsv1hz92p6x62nf78j1f0x9nl55fl5mzc29lncqib8g8ak"; libraryHaskellDepends = [ aeson base containers deepseq directory extra filepath fingertree generic-lens ghc ghc-boot-th ghc-exactprint ghc-source-gen ghcide - hls-plugin-api lens lsp mtl refinery retrie shake syb text + hls-graph hls-plugin-api hyphenation lens lsp megaparsec mtl + parser-combinators prettyprinter refinery retrie syb text transformers unordered-containers ]; testHaskellDepends = [ @@ -130291,20 +130551,18 @@ self: { "hls-test-utils" = callPackage ({ mkDerivation, aeson, async, base, blaze-markup, bytestring , containers, data-default, directory, extra, filepath, ghcide - , hls-plugin-api, hspec, hspec-core, lens, lsp, lsp-test, lsp-types - , shake, tasty, tasty-expected-failure, tasty-golden, tasty-hunit - , tasty-rerun, temporary, text, unordered-containers + , hls-graph, hls-plugin-api, hspec, hspec-core, lens, lsp, lsp-test + , lsp-types, tasty, tasty-expected-failure, tasty-golden + , tasty-hunit, tasty-rerun, temporary, text, unordered-containers }: mkDerivation { pname = "hls-test-utils"; - version = "1.0.0.0"; - sha256 = "18n7vb9fa39jkgr0gvsrjfc0nh09w2xlniifb25bn6z3qc3w0h6i"; - revision = "1"; - editedCabalFile = "048all6d50kyzln2nfp096ry5zwbair2srifhshnipg8qvs2cwpl"; + version = "1.0.1.0"; + sha256 = "0pqypxqwh8dm4xl7bpfqdvzaxw98v7bwbzkssgx5zgczhzs2y8mi"; libraryHaskellDepends = [ aeson async base blaze-markup bytestring containers data-default - directory extra filepath ghcide hls-plugin-api hspec hspec-core - lens lsp lsp-test lsp-types shake tasty tasty-expected-failure + directory extra filepath ghcide hls-graph hls-plugin-api hspec + hspec-core lens lsp lsp-test lsp-types tasty tasty-expected-failure tasty-golden tasty-hunit tasty-rerun temporary text unordered-containers ]; @@ -130642,6 +130900,7 @@ self: { description = "hmatrix interface to sundials"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {sundials_arkode = null; sundials_cvode = null;}; "hmatrix-svdlibc" = callPackage @@ -131053,10 +131312,10 @@ self: { }: mkDerivation { pname = "hnix"; - version = "0.13.0.1"; - sha256 = "1c01ns9h7va6ri568c0hzcdkmr0jdiay5z1vwwva7cv7dlvn6wl7"; - revision = "2"; - editedCabalFile = "148w8jbn4hrhp8zk90vr5grc4fsnsq4him6ii21imikril4ib7ya"; + version = "0.13.1"; + sha256 = "12mqwhvxk0w0fjbdl3ignayp08nm31qi028wq5qrkcyxw29ff1k7"; + revision = "1"; + editedCabalFile = "01dmzpcqav7p764dpicih8jm0g6yiiqgww8b5m6c0bfvvgfqyx2h"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -131095,16 +131354,16 @@ self: { ({ mkDerivation, algebraic-graphs, attoparsec, base , base16-bytestring, base64-bytestring, binary, bytestring, cereal , containers, cryptohash-md5, cryptohash-sha1, cryptohash-sha256 - , cryptohash-sha512, directory, filepath, hashable, lifted-base - , monad-control, mtl, nix-derivation, process, saltine, tasty - , tasty-discover, tasty-golden, tasty-hspec, tasty-hunit + , cryptohash-sha512, directory, filepath, hashable, hspec + , lifted-base, monad-control, mtl, nix-derivation, process, saltine + , tasty, tasty-discover, tasty-golden, tasty-hspec, tasty-hunit , tasty-quickcheck, temporary, text, time, unix , unordered-containers, vector }: mkDerivation { pname = "hnix-store-core"; - version = "0.4.2.0"; - sha256 = "02i7vxhpaqwyjvd6w2raxjz7r0xxs37x5b6pq9rw6l1l0k18nx5i"; + version = "0.4.3.0"; + sha256 = "17l7198s3dzjx416nplinyghbqgignvpvxkww241gjv4p23izf77"; libraryHaskellDepends = [ algebraic-graphs attoparsec base base16-bytestring base64-bytestring bytestring cereal containers cryptohash-md5 @@ -131114,14 +131373,48 @@ self: { ]; testHaskellDepends = [ attoparsec base base16-bytestring base64-bytestring binary - bytestring containers directory filepath process tasty tasty-golden - tasty-hspec tasty-hunit tasty-quickcheck temporary text unix + bytestring containers directory filepath hspec process tasty + tasty-golden tasty-hspec tasty-hunit tasty-quickcheck temporary + text unix ]; testToolDepends = [ tasty-discover ]; description = "Core effects for interacting with the Nix store"; license = lib.licenses.asl20; }) {}; + "hnix-store-core_0_5_0_0" = callPackage + ({ mkDerivation, algebraic-graphs, attoparsec, base + , base16-bytestring, base64-bytestring, binary, bytestring, cereal + , containers, cryptonite, directory, filepath, hashable, hspec + , lifted-base, memory, monad-control, mtl, nix-derivation, process + , saltine, tasty, tasty-discover, tasty-golden, tasty-hspec + , tasty-hunit, tasty-quickcheck, temporary, text, time, unix + , unordered-containers, vector + }: + mkDerivation { + pname = "hnix-store-core"; + version = "0.5.0.0"; + sha256 = "1w5qmk7qhasv2qydrhg3g5x9s2pjf5602w084lj1zbman44phzv5"; + revision = "1"; + editedCabalFile = "05jm5fv7fzp6gpjaw0f40fw58740k0g4cvfacq1bwcr39qnziavg"; + libraryHaskellDepends = [ + algebraic-graphs attoparsec base base16-bytestring + base64-bytestring bytestring cereal containers cryptonite directory + filepath hashable lifted-base memory monad-control mtl + nix-derivation saltine text time unix unordered-containers vector + ]; + testHaskellDepends = [ + attoparsec base base16-bytestring base64-bytestring binary + bytestring containers cryptonite directory filepath hspec process + tasty tasty-golden tasty-hspec tasty-hunit tasty-quickcheck + temporary text unix + ]; + testToolDepends = [ tasty-discover ]; + description = "Core effects for interacting with the Nix store"; + license = lib.licenses.asl20; + hydraPlatforms = lib.platforms.none; + }) {}; + "hnix-store-remote" = callPackage ({ mkDerivation, attoparsec, base, binary, bytestring, containers , hnix-store-core, mtl, network, nix-derivation, text, time @@ -131129,8 +131422,8 @@ self: { }: mkDerivation { pname = "hnix-store-remote"; - version = "0.4.2.0"; - sha256 = "17v785dql4rl2yn1qdagvnyx8y9r3bd02npg51mfqhl49knd92fr"; + version = "0.4.3.1"; + sha256 = "1wp6z5f13fkgh3mdzr1zcqdvsx1j90l5isf671gsg43brsv4c2vl"; libraryHaskellDepends = [ attoparsec base binary bytestring containers hnix-store-core mtl network nix-derivation text time unordered-containers @@ -131139,6 +131432,25 @@ self: { license = lib.licenses.asl20; }) {}; + "hnix-store-remote_0_5_0_0" = callPackage + ({ mkDerivation, attoparsec, base, binary, bytestring, containers + , cryptonite, hnix-store-core, mtl, network, nix-derivation, text + , time, unordered-containers + }: + mkDerivation { + pname = "hnix-store-remote"; + version = "0.5.0.0"; + sha256 = "0xvqi1l84ic249qf566vz3pxv75qwgc5d2cf3grh3rcxchp12kf9"; + libraryHaskellDepends = [ + attoparsec base binary bytestring containers cryptonite + hnix-store-core mtl network nix-derivation text time + unordered-containers + ]; + description = "Remote hnix store"; + license = lib.licenses.asl20; + hydraPlatforms = lib.platforms.none; + }) {}; + "hnn" = callPackage ({ mkDerivation, base, binary, bytestring, hmatrix, mwc-random , random, vector, vector-binary-instances, zlib @@ -132626,6 +132938,24 @@ self: { license = lib.licenses.gpl3Only; }) {}; + "hosc_0_19_1" = callPackage + ({ mkDerivation, base, binary, blaze-builder, bytestring + , data-binary-ieee754, network, time, transformers + }: + mkDerivation { + pname = "hosc"; + version = "0.19.1"; + sha256 = "08q218p1skqxwa7f55nsgmv9z8digf1c0f1wi6p562q6d4i044z7"; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + base binary blaze-builder bytestring data-binary-ieee754 network + time transformers + ]; + description = "Haskell Open Sound Control"; + license = lib.licenses.gpl3Only; + hydraPlatforms = lib.platforms.none; + }) {}; + "hosc-json" = callPackage ({ mkDerivation, aeson, attoparsec, base, bifunctors, bytestring , hosc, json, text, transformers, unordered-containers, utf8-string @@ -133538,8 +133868,8 @@ self: { }: mkDerivation { pname = "hpqtypes"; - version = "1.9.1.0"; - sha256 = "13q20ak0zakwvlc05y187iq2vpvdjx9dlmvmgvv2gjd263sqcgm2"; + version = "1.9.1.1"; + sha256 = "0s5dyia6v59vz7xk8m6gj0shdygk39pmks5yr7dlzksb8gqfgral"; setupHaskellDepends = [ base Cabal directory filepath ]; libraryHaskellDepends = [ aeson async base bytestring containers exceptions lifted-base @@ -133570,6 +133900,8 @@ self: { pname = "hpqtypes-extras"; version = "1.11.0.0"; sha256 = "0574ma8b149rhpdk9mdg5sawhl3db4d0qxs5az31g83i93hf4mwq"; + revision = "2"; + editedCabalFile = "1n98wpppwd0gwchwfis525qac3808j1vnvb3vxziq1d9x088gqf6"; libraryHaskellDepends = [ base base16-bytestring bytestring containers cryptohash exceptions extra fields-json hpqtypes lifted-base log-base monad-control mtl @@ -134082,8 +134414,8 @@ self: { }: mkDerivation { pname = "hs-aws-lambda"; - version = "0.1.0.2"; - sha256 = "078qkvxbjdsqgjmfq4fcpndb8c8cyz4g8s1q0ankpy359dvgxkv8"; + version = "0.1.0.4"; + sha256 = "1brykgglhslvgh3jrklr4m3mjcrzp0yq90xxyqh3h0prmswnx9y7"; libraryHaskellDepends = [ aeson base bytestring case-insensitive containers deepseq http-client http-types safe-exceptions text unliftio @@ -135353,18 +135685,19 @@ self: { "hsc3" = callPackage ({ mkDerivation, array, base, binary, bytestring, containers - , data-ordlist, directory, filepath, hosc, murmur-hash, network - , process, random, safe, split, transformers, vector + , data-binary-ieee754, data-ordlist, directory, filepath, hosc, mtl + , murmur-hash, network, process, random, safe, split, transformers + , vector }: mkDerivation { pname = "hsc3"; - version = "0.18"; - sha256 = "1j6jdgvvk3pxyky63khszv0cim4b7wbffpcpa098ii98fib0r47i"; + version = "0.19.1"; + sha256 = "0yz8h83hrnw28bwqqaa792w89y2pz1lkv3zwmwj9p2z8xv0hf14n"; enableSeparateDataOutput = true; libraryHaskellDepends = [ - array base binary bytestring containers data-ordlist directory - filepath hosc murmur-hash network process random safe split - transformers vector + array base binary bytestring containers data-binary-ieee754 + data-ordlist directory filepath hosc mtl murmur-hash network + process random safe split transformers vector ]; description = "Haskell SuperCollider"; license = lib.licenses.gpl3Only; @@ -135771,6 +136104,32 @@ self: { broken = true; }) {}; + "hscdio" = callPackage + ({ mkDerivation, base, base-compat, bitwise, bytestring, c2hs, cdio + , containers, directory, hedgehog, hedgehog-classes, HUnit, mtl + , text, vector + }: + mkDerivation { + pname = "hscdio"; + version = "0.1.0.0"; + sha256 = "0lwyy8x5zrdl0mg7siclagic7xg2iywapwkdk8kcz3ksdsir7xpd"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base bitwise bytestring containers mtl text vector + ]; + librarySystemDepends = [ cdio ]; + libraryToolDepends = [ c2hs ]; + testHaskellDepends = [ + base base-compat bytestring directory hedgehog hedgehog-classes + HUnit text + ]; + description = "Haskell bindings to the libcdio disc-reading library"; + license = lib.licenses.gpl3Plus; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {cdio = null;}; + "hscharm" = callPackage ({ mkDerivation, base, random, random-shuffle }: mkDerivation { @@ -136597,8 +136956,8 @@ self: { pname = "hslogger"; version = "1.3.1.0"; sha256 = "0nyar9xcblx5jwks85y8f4jfy9k1h4ss6rvj4mdbiidrq3v688vz"; - revision = "2"; - editedCabalFile = "1bkv1rbbx0bhyvrmnsyspm30q48820a6rym0msxjdzp8r56rbm9w"; + revision = "3"; + editedCabalFile = "04mda3bwr2a00f5nbkqc84d46lmqfsk3gibzg3amdh74ngb451xq"; libraryHaskellDepends = [ base bytestring containers deepseq network network-bsd old-locale time unix @@ -137659,8 +138018,8 @@ self: { ({ mkDerivation, base, hspec, hspec-core, HUnit, leancheck }: mkDerivation { pname = "hspec-leancheck"; - version = "0.0.4"; - sha256 = "06amq8467wv2jkx9f4pif0z5rgvj35hdp1yffqkxyxh65148prcb"; + version = "0.0.6"; + sha256 = "1pbvbqjy3smplax626g6dwycqqn9w9i0pg30lqzzq0r32w53z7si"; libraryHaskellDepends = [ base hspec hspec-core HUnit leancheck ]; testHaskellDepends = [ base hspec leancheck ]; description = "LeanCheck support for the Hspec test framework"; @@ -140003,14 +140362,14 @@ self: { "http-client-websockets" = callPackage ({ mkDerivation, base, bytestring, hspec, http-client - , http-client-tls, network-uri, utf8-string, websockets + , http-client-tls, network-uri, text, websockets }: mkDerivation { pname = "http-client-websockets"; - version = "0.1.1.1"; - sha256 = "0b5kvyrfhhj7c5ys8ccxwv6prhb6sj0ycinzbk1yrwnd3wrmzk78"; + version = "0.1.1.2"; + sha256 = "0g2zhj0fzhynyls5rxpzh50hxjsygx7037rw2h79ihca10crsqgm"; libraryHaskellDepends = [ - base bytestring http-client network-uri utf8-string websockets + base bytestring http-client network-uri text websockets ]; testHaskellDepends = [ base bytestring hspec http-client-tls network-uri websockets @@ -140767,8 +141126,8 @@ self: { }: mkDerivation { pname = "http2"; - version = "3.0.1"; - sha256 = "1c1vhb2x23rlw7ciayz0rx6lpifjwrvpg88nspwa9w5nbjij2258"; + version = "3.0.2"; + sha256 = "13c2z35gdimncgpyg5dn5cpjvd83rbrigc8b40crg36678m0k0d1"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -142020,6 +142379,8 @@ self: { ]; description = "File Dump"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hw-eliasfano" = callPackage @@ -142499,6 +142860,8 @@ self: { testToolDepends = [ doctest-discover hspec-discover ]; description = "Monadic query DSL"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "hw-packed-vector" = callPackage @@ -142997,8 +143360,8 @@ self: { }: mkDerivation { pname = "hwk"; - version = "0.5"; - sha256 = "1nn8021nf7pwr8r0ffvsr3yjvjgv4f15l7j8s9pisi4n280lv8h0"; + version = "0.6"; + sha256 = "1xn3rn81ixx5mil8x1s26cxsdnpq2mhbfcs26969rk3k9lbzvc38"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -144030,6 +144393,35 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; + "hypertypes" = callPackage + ({ mkDerivation, array, base, base-compat, binary, constraints + , containers, criterion, deepseq, generic-constraints, generic-data + , lattices, lens, monad-st, mtl, pretty, QuickCheck + , show-combinators, template-haskell, text, th-abstraction + , transformers + }: + mkDerivation { + pname = "hypertypes"; + version = "0.1.0.1"; + sha256 = "0b3cnjw07pryqslnx0k6lxdpwnihnk6pnhp6l9d09mqyxymd9nyx"; + libraryHaskellDepends = [ + array base base-compat binary constraints containers deepseq + generic-constraints generic-data lattices lens monad-st mtl pretty + QuickCheck show-combinators template-haskell th-abstraction + transformers + ]; + testHaskellDepends = [ + base constraints containers generic-constraints generic-data + lattices lens monad-st mtl pretty text transformers + ]; + benchmarkHaskellDepends = [ + base constraints containers criterion generic-constraints + generic-data lattices lens monad-st mtl pretty transformers + ]; + description = "Typed ASTs"; + license = lib.licenses.bsd3; + }) {}; + "hyphenate" = callPackage ({ mkDerivation, base, containers }: mkDerivation { @@ -144714,8 +145106,8 @@ self: { pname = "identicon"; version = "0.2.2"; sha256 = "0qzj2063sh7phbqyxqxf96avz1zcwd1ry06jdqxwkg55q3yb8y9n"; - revision = "3"; - editedCabalFile = "0vya6zm3nnbdv3wmj3dwqwwjgsagql8q17078knhjddv2lm8m49q"; + revision = "4"; + editedCabalFile = "1mlmn7ccns2rnhgmnlq9m2rqc9mgj0262ckqbm01w1fiycw3nq7b"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base bytestring JuicyPixels ]; testHaskellDepends = [ @@ -145890,7 +146282,7 @@ self: { }) {}; "imperative-edsl" = callPackage - ({ mkDerivation, array, base, BoundedChan, containers + ({ mkDerivation, array, base, BoundedChan, constraints, containers , data-default-class, deepseq, directory, exception-transformers , filepath, ghc-prim, language-c-quote, mainland-pretty, microlens , microlens-mtl, microlens-th, mtl, operational-alacarte, process @@ -145898,11 +146290,11 @@ self: { }: mkDerivation { pname = "imperative-edsl"; - version = "0.8.1"; - sha256 = "1z1a7b7m69m9xagvfa6xx3l1j0s7lrlvp4n09lra1x3q7lpfgnra"; + version = "0.8.2"; + sha256 = "1m8ynjzi97ps9x9sf03zg7y2vq15kzch9fdnzmh9wsmmkfpqljzs"; libraryHaskellDepends = [ - array base BoundedChan containers data-default-class deepseq - directory exception-transformers ghc-prim language-c-quote + array base BoundedChan constraints containers data-default-class + deepseq directory exception-transformers ghc-prim language-c-quote mainland-pretty microlens microlens-mtl microlens-th mtl operational-alacarte process srcloc stm syntactic time ]; @@ -146011,8 +146403,8 @@ self: { }: mkDerivation { pname = "implicit-hie-cradle"; - version = "0.3.0.2"; - sha256 = "185pisgqp95zkpcksqiwiyghmg01cvfa7g6wzc31004mwwb114ih"; + version = "0.3.0.3"; + sha256 = "1rv6piiyy0f9l2pmwlc3j47g2lnz7sbipb5jdn1m76z4j66y05n9"; libraryHaskellDepends = [ base base16-bytestring bytestring containers directory extra filepath hie-bios hslogger implicit-hie process temporary text time @@ -146304,6 +146696,17 @@ self: { broken = true; }) {}; + "include-env" = callPackage + ({ mkDerivation, base, template-haskell }: + mkDerivation { + pname = "include-env"; + version = "0.1.3.0"; + sha256 = "0yj7gbsxdjihf243c0xym5yxdkyr1s8qs8dvxhf7xf5pw77y03qg"; + libraryHaskellDepends = [ base template-haskell ]; + description = "Include the value of an environment variable at compile time"; + license = lib.licenses.bsd3; + }) {}; + "include-file" = callPackage ({ mkDerivation, base, bytestring, Cabal, criterion, random , template-haskell @@ -147345,17 +147748,17 @@ self: { }) {aether = null;}; "insert-ordered-containers" = callPackage - ({ mkDerivation, aeson, base, base-compat, hashable + ({ mkDerivation, aeson, base, base-compat, deepseq, hashable , indexed-traversable, lens, optics-core, optics-extra, QuickCheck , semigroupoids, semigroups, tasty, tasty-quickcheck, text , transformers, unordered-containers }: mkDerivation { pname = "insert-ordered-containers"; - version = "0.2.4"; - sha256 = "174maygil2mffjz2ssqawlmv36413m65zp3ng67hzij4dh8piz7x"; + version = "0.2.5"; + sha256 = "0bb3ggzic8z5zmvmzp1fsnb572c2v383740b0ddf1fwihpn52c1y"; libraryHaskellDepends = [ - aeson base base-compat hashable indexed-traversable lens + aeson base base-compat deepseq hashable indexed-traversable lens optics-core optics-extra semigroupoids semigroups text transformers unordered-containers ]; @@ -147673,8 +148076,8 @@ self: { pname = "int-cast"; version = "0.2.0.0"; sha256 = "0s8rqm5d9f4y2sskajsw8ff7q8xp52vwqa18m6bajldp11m9a1p0"; - revision = "3"; - editedCabalFile = "1b99lqxwbhg96iykfr2l7qd388cbx9sf8bln728505qgj6kgsvj7"; + revision = "4"; + editedCabalFile = "1l5n3hsa8gr0wzc3cb32ha2j8kcf976i84z04580q41macf0r0h6"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base QuickCheck test-framework test-framework-quickcheck2 @@ -148297,8 +148700,8 @@ self: { }: mkDerivation { pname = "interval-algebra"; - version = "0.8.0"; - sha256 = "1mayv7rqpbx09y82vyzdvbdjrqgk4vpsbz7qx9cy2h09q355zs7d"; + version = "0.8.2"; + sha256 = "1xa9rlb9klf0bnig0ccryjxcbz023hwy1wnxp4vwn5ggb0fbmzys"; libraryHaskellDepends = [ base containers QuickCheck safe time witherable ]; @@ -148550,17 +148953,15 @@ self: { }: mkDerivation { pname = "invert"; - version = "1.0"; - sha256 = "18q070bawfnyi4wl6rxb6l5ihda0xzmlb8g1z0sg46vghvbs985v"; - revision = "2"; - editedCabalFile = "1829iy3jg0zwms16cqd4rdg5khl348ih44b3mz7l7cy9wlci3cli"; + version = "1.0.0.1"; + sha256 = "07p7vcc3mc4zq0j2qlm4yp0cfsashb32ndx5i9ib0x6lk6rb9djp"; libraryHaskellDepends = [ base containers generic-deriving hashable unordered-containers vector ]; testHaskellDepends = [ base ]; benchmarkHaskellDepends = [ base criterion ]; - description = "Automatically generate a function's inverse"; + description = "Automatically generate a function’s inverse"; license = lib.licenses.asl20; hydraPlatforms = lib.platforms.none; broken = true; @@ -148781,6 +149182,8 @@ self: { pname = "io-streams"; version = "1.5.2.1"; sha256 = "1y3sqmxrwiksz7pl4hf3vzvg8p8n00qnv98nj5xbpcadlh468rny"; + revision = "1"; + editedCabalFile = "0zgrhvafnk9ds29n6x93cifw4993mgvvx3p2d3922frkjvd6xa5v"; configureFlags = [ "-fnointeractivetests" ]; libraryHaskellDepends = [ attoparsec base bytestring network primitive process text time @@ -148974,7 +149377,6 @@ self: { ]; description = "Library for IP and MAC addresses"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "ip-quoter" = callPackage @@ -149038,8 +149440,8 @@ self: { }: mkDerivation { pname = "ipa"; - version = "0.3.1"; - sha256 = "1l658qnqfs63dwarmiaw7vf6v2xl8hhvzlb95w168rpa7wfkrh5n"; + version = "0.3.1.1"; + sha256 = "08n47l0vjcyp0g3wlwww0cf8cyqfy6mj5480r94in7l3zr7vx6a4"; libraryHaskellDepends = [ attoparsec base template-haskell text unicode-transforms ]; @@ -149103,23 +149505,26 @@ self: { ({ mkDerivation, aeson, base, bytestring, directory, directory-tree , doctest, envy, flow, Glob, http-media, lens, lens-aeson , monad-logger, network-ip, QuickCheck, regex-compat, rio, servant - , servant-client, servant-multipart, servant-server, swagger2, text - , vector, yaml + , servant-client, servant-multipart, servant-multipart-api + , servant-multipart-client, servant-server, swagger2, text, vector + , yaml }: mkDerivation { pname = "ipfs"; - version = "1.3.0.3"; - sha256 = "08g1lvh7w46qsg80h5nm3r333zbhl2q4shnrm5jann4p3g5ii08x"; + version = "1.3.1"; + sha256 = "0jf5wragwcqhal860s1i26dk32dmnhsyl4n85mr8sc8v626bkj76"; libraryHaskellDepends = [ aeson base bytestring envy flow Glob http-media lens monad-logger network-ip regex-compat rio servant servant-client - servant-multipart servant-server swagger2 text vector + servant-multipart servant-multipart-api servant-multipart-client + servant-server swagger2 text vector ]; testHaskellDepends = [ aeson base bytestring directory directory-tree doctest envy flow Glob http-media lens lens-aeson monad-logger network-ip QuickCheck regex-compat rio servant servant-client servant-multipart - servant-server swagger2 text vector yaml + servant-multipart-api servant-multipart-client servant-server + swagger2 text vector yaml ]; description = "Access IPFS locally and remotely"; license = lib.licenses.asl20; @@ -149354,6 +149759,7 @@ self: { ]; description = "An IRC client library"; license = lib.licenses.mit; + maintainers = with lib.maintainers; [ sternenseemann ]; }) {}; "irc-colors" = callPackage @@ -149591,6 +149997,7 @@ self: { description = "RFC-based resource identifier library"; license = lib.licenses.mit; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "iridium" = callPackage @@ -150242,7 +150649,6 @@ self: { ]; description = "Orphan Show instances for diagrams package that render inline in some terminals"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "ival" = callPackage @@ -151301,22 +151707,23 @@ self: { }) {}; "jenkinsPlugins2nix" = callPackage - ({ mkDerivation, ansi-wl-pprint, attoparsec, base, bimap - , bytestring, containers, cryptohash, hnix, http-conduit, mtl - , optparse-applicative, tasty-hspec, text, zip-archive + ({ mkDerivation, attoparsec, base, bimap, bytestring, containers + , cryptohash, hnix, http-conduit, mtl, optparse-applicative + , prettyprinter, prettyprinter-ansi-terminal, tasty-hspec, text + , zip-archive }: mkDerivation { pname = "jenkinsPlugins2nix"; - version = "0.2.0.2"; - sha256 = "04ddcri3rwszxjl65c5kha6lkrf3w89gfri2cdghdq0znl51hvf5"; + version = "0.3.0.1"; + sha256 = "0jqapzgq0z346af1626zl67dnnpr6i7bsqrhxhiz32w70kjhisa1"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - ansi-wl-pprint attoparsec base bytestring containers cryptohash - hnix http-conduit mtl text zip-archive + attoparsec base bytestring containers cryptohash hnix http-conduit + mtl prettyprinter text zip-archive ]; executableHaskellDepends = [ - ansi-wl-pprint base bimap optparse-applicative text + base bimap optparse-applicative prettyprinter-ansi-terminal text ]; testHaskellDepends = [ base containers tasty-hspec text ]; description = "Generate nix for Jenkins plugins"; @@ -151384,8 +151791,8 @@ self: { ({ mkDerivation, base, mtl, parsec, tasty, tasty-hunit, text }: mkDerivation { pname = "jira-wiki-markup"; - version = "1.3.4"; - sha256 = "0rrqaibgafbynrlcsp7f7hkzgkp2gix7ji2hkpgpby6fvp6965fh"; + version = "1.4.0"; + sha256 = "0p6axj6km4440ss5naw68r3r85si4qxqgrklp6ssfyapawy0s88w"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base mtl parsec text ]; @@ -151858,8 +152265,8 @@ self: { }: mkDerivation { pname = "jsaddle"; - version = "0.9.7.1"; - sha256 = "1igkv5lvlbq0xl2dp6d8fp4ybwnwmgrc3r4sfjsric0bj8sq2k86"; + version = "0.9.8.0"; + sha256 = "0g3jdh4x80fsbrcj5kd81inv8hcx662v5dsn9d6q1dla0cz8w8i9"; libraryHaskellDepends = [ aeson attoparsec base base-compat base64-bytestring bytestring containers deepseq exceptions filepath ghc-prim http-types lens @@ -151876,8 +152283,8 @@ self: { }: mkDerivation { pname = "jsaddle-clib"; - version = "0.9.7.1"; - sha256 = "07s2iy136dm526mr7q43mxqq9qndg8jbi9kz1652qgl0ivn8lapc"; + version = "0.9.8.0"; + sha256 = "0axgfkxgvm4awvklss2pqa8a4112m3q7k38h71anxs6i199lgkyq"; libraryHaskellDepends = [ aeson base base-compat bytestring data-default jsaddle text ]; @@ -151925,8 +152332,8 @@ self: { }: mkDerivation { pname = "jsaddle-warp"; - version = "0.9.7.1"; - sha256 = "1piyxxmik1bwdzkz46vgdhdp0gw4p01fww591zqbxzjk6rmrpby0"; + version = "0.9.8.0"; + sha256 = "06bf071xnfx7mjzf7jdyjspjw28s2z3br5gmx9vcs7paji20c8np"; libraryHaskellDepends = [ aeson base bytestring containers foreign-store http-types jsaddle stm text time transformers wai wai-websockets warp websockets @@ -151950,8 +152357,8 @@ self: { }: mkDerivation { pname = "jsaddle-webkit2gtk"; - version = "0.9.7.1"; - sha256 = "0f2siaid0b03zrjzpb3lr9k9w5np2vml6apd961zd97dghvvhiix"; + version = "0.9.8.0"; + sha256 = "01iav691d3h6l9x7vw0spb68n4y5m9pb8d02iyp5lvkqr2y4h9kv"; libraryHaskellDepends = [ aeson base bytestring directory gi-gio gi-glib gi-gtk gi-javascriptcore gi-webkit2 haskell-gi-base haskell-gi-overloading @@ -151984,17 +152391,11 @@ self: { }) {}; "jsaddle-wkwebview" = callPackage - ({ mkDerivation, aeson, base, bytestring, containers, data-default - , directory, jsaddle, text - }: + ({ mkDerivation }: mkDerivation { pname = "jsaddle-wkwebview"; - version = "0.9.7.1"; - sha256 = "0dfaysw7fzmv2b62wi5id45f4i0x2vbjp9irbdkmv1h2z3ydwy20"; - libraryHaskellDepends = [ - aeson base bytestring containers data-default directory jsaddle - text - ]; + version = "0.9.8.0"; + sha256 = "1cjncl2jqnx4j83pmcnnvcc0rswhwwb5grwh636b11yyp4vv58dw"; description = "Interface for JavaScript that works with GHCJS and GHC"; license = lib.licenses.mit; hydraPlatforms = lib.platforms.none; @@ -152758,6 +153159,7 @@ self: { description = "High-performance JSON parser and encoder"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "json-to-haskell" = callPackage @@ -153007,30 +153409,29 @@ self: { ]; description = "Fast and simple JSON encoding toolkit"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "jsonnet" = callPackage - ({ mkDerivation, aeson, ansi-wl-pprint, base, bytestring + ({ mkDerivation, aeson, ansi-wl-pprint, base, binary, bytestring , containers, data-fix, deriving-compat, directory, exceptions - , filepath, hashable, megaparsec, mtl, optparse-applicative - , parser-combinators, scientific, semigroupoids, tasty + , filepath, hashable, lens, megaparsec, mtl, optparse-applicative + , parser-combinators, scientific, semigroupoids, tasty, tasty-bench , tasty-golden, tasty-hunit, template-haskell, text - , transformers-compat, unbound-generics, unordered-containers - , vector + , th-lift-instances, th-utilities, transformers-compat + , unbound-generics, unordered-containers, vector }: mkDerivation { pname = "jsonnet"; - version = "0.2.0.0"; - sha256 = "0ns2yij8yl555n5rb0pahxpqrwxgzfvdr4ajp0dy5amqsv13hhmh"; + version = "0.3.1.1"; + sha256 = "021kklj3ycpm5n2r6bjqc0vicn9vdv5a56sd1la6pf430i1fd7z9"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson ansi-wl-pprint base bytestring containers data-fix - deriving-compat directory exceptions filepath hashable megaparsec - mtl optparse-applicative parser-combinators scientific - semigroupoids template-haskell text transformers-compat - unbound-generics unordered-containers vector + aeson ansi-wl-pprint base binary bytestring containers data-fix + deriving-compat directory exceptions filepath hashable lens + megaparsec mtl parser-combinators scientific semigroupoids + template-haskell text th-lift-instances th-utilities + transformers-compat unbound-generics unordered-containers vector ]; executableHaskellDepends = [ aeson ansi-wl-pprint base bytestring mtl optparse-applicative text @@ -153039,6 +153440,9 @@ self: { ansi-wl-pprint base bytestring filepath mtl tasty tasty-golden tasty-hunit text ]; + benchmarkHaskellDepends = [ + ansi-wl-pprint base bytestring tasty-bench text + ]; description = "Jsonnet implementaton in pure Haskell"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; @@ -154399,6 +154803,7 @@ self: { description = "Utilities for serving static sites and blogs with Wai/Warp"; license = lib.licenses.asl20; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "kawhi" = callPackage @@ -154995,8 +155400,8 @@ self: { }: mkDerivation { pname = "kempe"; - version = "0.2.0.3"; - sha256 = "0bki6h5qk78d3qgprn8k1av2xxlb43bxb07qqk4x1x5diy92mc5x"; + version = "0.2.0.4"; + sha256 = "0rzpid5lnjnjgsip3fvm5d313hh8wb7gqla3dyf56l9q7y4r20js"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -155165,19 +155570,19 @@ self: { ({ mkDerivation, aeson, aeson-casing, base, base64-bytestring , bytestring, containers, exceptions, hashable, hslogger , http-api-data, http-client, http-types, jose, lens, lens-aeson - , mtl, safe, string-conversions, text, unordered-containers, word8 - , wreq + , monad-time, mtl, safe, string-conversions, text + , unordered-containers, word8, wreq }: mkDerivation { pname = "keycloak-hs"; - version = "2.1.0"; - sha256 = "0yki4fqbgirnvcaf5p00pskh91abspivgkkdi9m93andz56vl23v"; + version = "3.0.1"; + sha256 = "1311rzvib7cbb2j4bjqbd5y03frsqqn32grhypvk0fplrdr1hazn"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ aeson aeson-casing base base64-bytestring bytestring containers exceptions hashable hslogger http-api-data http-client http-types - jose lens lens-aeson mtl safe string-conversions text + jose lens lens-aeson monad-time mtl safe string-conversions text unordered-containers word8 wreq ]; executableHaskellDepends = [ base hslogger ]; @@ -156201,6 +156606,8 @@ self: { libraryHaskellDepends = [ base dlist transformers ]; description = "Combinators for Strategic Programming"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "kure-your-boilerplate" = callPackage @@ -157501,25 +157908,6 @@ self: { }) {}; "language-c" = callPackage - ({ mkDerivation, alex, array, base, bytestring, containers, deepseq - , directory, filepath, happy, pretty, process, syb - }: - mkDerivation { - pname = "language-c"; - version = "0.8.3"; - sha256 = "0bi02jdirkys8v7flf39vrpla2a74z1z0sdhy9lb9v7cmcc6rmpk"; - libraryHaskellDepends = [ - array base bytestring containers deepseq directory filepath pretty - process syb - ]; - libraryToolDepends = [ alex happy ]; - testHaskellDepends = [ base directory filepath process ]; - description = "Analysis and generation of C code"; - license = lib.licenses.bsd3; - maintainers = with lib.maintainers; [ expipiplus1 ]; - }) {}; - - "language-c_0_9_0_1" = callPackage ({ mkDerivation, alex, array, base, bytestring, containers, deepseq , directory, filepath, happy, mtl, pretty, process }: @@ -157535,7 +157923,6 @@ self: { testHaskellDepends = [ base directory filepath process ]; description = "Analysis and generation of C code"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; maintainers = with lib.maintainers; [ expipiplus1 ]; }) {}; @@ -158683,8 +159070,8 @@ self: { ({ mkDerivation, base, pretty }: mkDerivation { pname = "language-vhdl"; - version = "0.1.3"; - sha256 = "03n5cnr71zq3fl0ajjiyzjq2x2848lwd9gfp4kjkkjaxw0lb6bka"; + version = "0.1.4"; + sha256 = "19nz1qym3b3vfzfhiqaf2pg73am7l0c6dy1b7lxzjfbi7s0jfnva"; libraryHaskellDepends = [ base pretty ]; description = "VHDL AST and pretty printer in Haskell"; license = lib.licenses.bsd3; @@ -159124,8 +159511,8 @@ self: { }: mkDerivation { pname = "launchdarkly-server-sdk"; - version = "2.1.1"; - sha256 = "1gjiwj8x57z9qs9gxdgqyih38i8rkkvjak4va5cg44qp3rflmby1"; + version = "2.2.0"; + sha256 = "0hi6w7rb1qf3dzla5cjmhz25a4ynkc29mpnixgdx5i8p771zyg3z"; libraryHaskellDepends = [ aeson attoparsec base base16-bytestring bytestring bytestring-conversion clock containers cryptohash exceptions extra @@ -159739,8 +160126,8 @@ self: { ({ mkDerivation, base, template-haskell }: mkDerivation { pname = "leancheck"; - version = "0.9.4"; - sha256 = "0w17ymj7k4sr9jwp9yrgh3l94l3kgjyxxnpxwj2sdqk8fvmjpkny"; + version = "0.9.10"; + sha256 = "0d35w3y309fw3bkaj6fxyl67k4cp32mp003l44m3m2z2fvq08cdn"; libraryHaskellDepends = [ base template-haskell ]; testHaskellDepends = [ base ]; description = "Enumerative property-based testing"; @@ -160737,8 +161124,8 @@ self: { }: mkDerivation { pname = "lentil"; - version = "1.5.1.0"; - sha256 = "03h7fk37rrxpnxfpckpfi5k3v7ch4v5vn601m9lj9shbs26h1cdx"; + version = "1.5.2.0"; + sha256 = "0mkr8ng7i4cli8wscqy2l8112nr7wdg8dh32li354fvahmv6i4si"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -161167,24 +161554,24 @@ self: { "libarchive" = callPackage ({ mkDerivation, base, bytestring, c2hs, Cabal, chs-cabal , composition-prelude, cpphs, criterion, deepseq, dir-traverse - , directory, dlist, filepath, hspec, libarchive, mtl + , directory, dlist, filepath, hspec, hspec-core, libarchive, mtl , pathological-bytestrings, tar, tar-conduit, temporary , unix-compat }: mkDerivation { pname = "libarchive"; - version = "3.0.2.1"; - sha256 = "16h5pw49g9nc4aq7g8hwj1bq1raf1jas09xcsk99sylssvf2yf43"; + version = "3.0.2.2"; + sha256 = "1i3zrby1pmlm7dwv1xra9xmlv4a30cgmbwz5zygdyw1mwy4y9wnh"; setupHaskellDepends = [ base Cabal chs-cabal ]; libraryHaskellDepends = [ base bytestring composition-prelude deepseq dlist filepath mtl unix-compat ]; libraryPkgconfigDepends = [ libarchive ]; - libraryToolDepends = [ c2hs ]; + libraryToolDepends = [ c2hs cpphs ]; testHaskellDepends = [ base bytestring composition-prelude dir-traverse directory filepath - hspec mtl pathological-bytestrings temporary + hspec hspec-core mtl pathological-bytestrings temporary ]; testToolDepends = [ cpphs ]; benchmarkHaskellDepends = [ @@ -162189,15 +162576,18 @@ self: { }) {nvpair = null; inherit (pkgs) zfs;}; "licensor" = callPackage - ({ mkDerivation, base, Cabal, containers, directory, process }: + ({ mkDerivation, base, bytestring, Cabal, containers, directory + , http-client, http-client-tls, process, tar, temporary, zlib + }: mkDerivation { pname = "licensor"; - version = "0.4.3"; - sha256 = "19ydisxc5yzm0ccj76p7sg39cpjg5c57wd3gaybc5k7bqrlv14c6"; + version = "0.5.0"; + sha256 = "0i49l4d5dvvj4s6fbdhg38dmdclxr4ld69lzm1s5xx9m7aqy3al9"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - base Cabal containers directory process + base bytestring Cabal containers directory http-client + http-client-tls process tar temporary zlib ]; executableHaskellDepends = [ base Cabal containers directory ]; description = "A license compatibility helper"; @@ -162463,6 +162853,23 @@ self: { broken = true; }) {}; + "lifx-lan" = callPackage + ({ mkDerivation, base, binary, bytestring, composition, containers + , extra, monad-loops, mtl, network, random, safe, text, time + , transformers + }: + mkDerivation { + pname = "lifx-lan"; + version = "0.3.0"; + sha256 = "051h65m47vnhakg37a8dj1mbisxc9pb5zk4yp41dvcr0as2x4ngl"; + libraryHaskellDepends = [ + base binary bytestring composition containers extra monad-loops mtl + network random safe text time transformers + ]; + description = "LIFX LAN API"; + license = lib.licenses.bsd3; + }) {}; + "ligature" = callPackage ({ mkDerivation, base, text }: mkDerivation { @@ -162861,6 +163268,8 @@ self: { testHaskellDepends = [ base doctest ]; description = "Lifting linear vector spaces into Accelerate"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "linear-algebra-cblas" = callPackage @@ -163063,18 +163472,24 @@ self: { "linearmap-category" = callPackage ({ mkDerivation, base, call-stack, constrained-categories - , containers, free-vector-spaces, ieee754, lens, linear - , manifolds-core, QuickCheck, semigroups, tagged, transformers - , vector, vector-space + , containers, data-default-class, free-vector-spaces, hashable + , ieee754, lens, linear, manifolds-core, MemoTrie, QuickCheck + , semigroups, tagged, tasty, tasty-quickcheck, template-haskell + , transformers, vector, vector-space }: mkDerivation { pname = "linearmap-category"; - version = "0.4.0.1"; - sha256 = "1zc7zns49d832wm22dsbv5xvh5x6s4zg6ky1vr941rs1z9jskmyj"; + version = "0.4.1.0"; + sha256 = "01cpl44wg5kyx9lxv23hcsxd8dw90psqj9sgaklhxklbdvn77bvr"; libraryHaskellDepends = [ base call-stack constrained-categories containers - free-vector-spaces ieee754 lens linear manifolds-core QuickCheck - semigroups tagged transformers vector vector-space + data-default-class free-vector-spaces hashable ieee754 lens linear + manifolds-core MemoTrie QuickCheck semigroups tagged + template-haskell transformers vector vector-space + ]; + testHaskellDepends = [ + base constrained-categories linear manifolds-core QuickCheck tasty + tasty-quickcheck vector-space ]; description = "Native, complete, matrix-free linear algebra"; license = lib.licenses.gpl3Only; @@ -164288,6 +164703,8 @@ self: { ]; description = "Tries and Patricia tries: finite sets and maps for list keys"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "list-tuple" = callPackage @@ -164500,20 +164917,56 @@ self: { broken = true; }) {}; + "literatex" = callPackage + ({ mkDerivation, ansi-wl-pprint, base, bytestring, conduit + , filepath, optparse-applicative, tasty, tasty-hunit, text, ttc + , unliftio + }: + mkDerivation { + pname = "literatex"; + version = "0.1.0.2"; + sha256 = "1axj5a10vj9fkpc89yzb8i7aq23bmygnf3mwvbp63vcvwmfyx49h"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base bytestring conduit text ttc unliftio + ]; + executableHaskellDepends = [ + ansi-wl-pprint base optparse-applicative ttc + ]; + testHaskellDepends = [ + base bytestring filepath tasty tasty-hunit text ttc unliftio + ]; + description = "transform literate source code to Markdown"; + license = lib.licenses.mit; + }) {}; + + "little-earley" = callPackage + ({ mkDerivation, base, containers, mtl, tasty, tasty-hunit }: + mkDerivation { + pname = "little-earley"; + version = "0.2.0.0"; + sha256 = "0zqlnaj1w6m2h7g55xg9cjl978ij66lw69x4v5b9vi7x7maa44ms"; + libraryHaskellDepends = [ base containers mtl ]; + testHaskellDepends = [ base containers mtl tasty tasty-hunit ]; + description = "Simple implementation of Earley parsing"; + license = lib.licenses.mit; + }) {}; + "little-logger" = callPackage - ({ mkDerivation, base, co-log, co-log-core, microlens, mtl, tasty - , tasty-hunit, text, unliftio-core + ({ mkDerivation, base, co-log, co-log-core, directory, microlens + , mtl, tasty, tasty-hunit, temporary, text, unliftio-core }: mkDerivation { pname = "little-logger"; - version = "0.3.1"; - sha256 = "0iqnidlv7r2kw6764aq3dlvxbmvm1c7qk8jkgbhbpm5g07k97c68"; + version = "0.3.2"; + sha256 = "0pwywpxdladsaprdzw856njcn42js7l73f361m0w3gd86xprwm8y"; libraryHaskellDepends = [ base co-log co-log-core microlens mtl text unliftio-core ]; testHaskellDepends = [ - base co-log co-log-core microlens mtl tasty tasty-hunit text - unliftio-core + base co-log co-log-core directory microlens mtl tasty tasty-hunit + temporary text unliftio-core ]; description = "Basic logging based on co-log"; license = lib.licenses.bsd3; @@ -165533,18 +165986,17 @@ self: { "log-base" = callPackage ({ mkDerivation, aeson, aeson-pretty, base, bytestring, deepseq - , exceptions, mmorph, monad-control, monad-time, mtl, semigroups - , stm, text, time, transformers-base, unliftio-core - , unordered-containers + , exceptions, mmorph, monad-control, mtl, semigroups, stm, text + , time, transformers-base, unliftio-core, unordered-containers }: mkDerivation { pname = "log-base"; - version = "0.9.1.0"; - sha256 = "0p0zb805a8zlxdnii6r0gmf0zic4g4zxkvcq84j6g8973qx1fch9"; + version = "0.10.0.0"; + sha256 = "1rbp34p7a89w960rpwmqwfqrj6nvqybbc5aqiji60zldxigvy3si"; libraryHaskellDepends = [ aeson aeson-pretty base bytestring deepseq exceptions mmorph - monad-control monad-time mtl semigroups stm text time - transformers-base unliftio-core unordered-containers + monad-control mtl semigroups stm text time transformers-base + unliftio-core unordered-containers ]; description = "Structured logging solution (base package)"; license = lib.licenses.bsd3; @@ -165612,8 +166064,8 @@ self: { }: mkDerivation { pname = "log-elasticsearch"; - version = "0.11.0.0"; - sha256 = "1l64mxk3zmlfsqwlhsq62jp8rawj3jbw9izihg7555q51pbqlg5w"; + version = "0.12.0.0"; + sha256 = "05cvk93s61k42bmsmj4997hdij4xk74a6jrd1qvdbkq13w20260m"; libraryHaskellDepends = [ aeson aeson-pretty base base64-bytestring bytestring deepseq http-client http-client-tls http-types log-base network-uri @@ -165632,10 +166084,8 @@ self: { }: mkDerivation { pname = "log-postgres"; - version = "0.7.1.4"; - sha256 = "1m96d5486xadypm5iby8rkb979k82md394j5iaik6xk5aavcn6xx"; - revision = "1"; - editedCabalFile = "0yyaxibkq8c9bwhaday8ijmfbm8k3i14wd9zsgfby99b6rxra351"; + version = "0.8.0.0"; + sha256 = "0vc3n53rpn3qwysp8y5i19ajaag386izsrf9h9k7c2g907k1skw6"; libraryHaskellDepends = [ aeson aeson-pretty base base64-bytestring bytestring deepseq hpqtypes http-client lifted-base log-base mtl semigroups split text @@ -165785,6 +166235,21 @@ self: { license = lib.licenses.bsd3; }) {}; + "logfmt" = callPackage + ({ mkDerivation, ansi-terminal, base, bytestring, fast-logger + , profunctors, time + }: + mkDerivation { + pname = "logfmt"; + version = "0.0.1"; + sha256 = "1phnyhh7pmv8mvh7lxbkswdr2j3vid8rb3n8iy34qn301bprnlb4"; + libraryHaskellDepends = [ + ansi-terminal base bytestring fast-logger profunctors time + ]; + description = "Formatting"; + license = lib.licenses.bsd3; + }) {}; + "logger" = callPackage ({ mkDerivation, ansi-wl-pprint, base, containers, lens, mtl , template-haskell, time, time-locale-compat, transformers @@ -166382,6 +166847,8 @@ self: { pname = "long-double"; version = "0.1.1"; sha256 = "0byrpngsh1a8w9n5nbw9lfmj4nmh33avzfh883zw9ya10pfa7x3g"; + revision = "1"; + editedCabalFile = "0831x773ypp0lv14cgh6vr7rzbyvrjsvw99c40z41fr8bhdw2x4j"; libraryHaskellDepends = [ base integer-gmp ]; description = "FFI bindings for C long double"; license = lib.licenses.bsd3; @@ -167874,8 +168341,8 @@ self: { }: mkDerivation { pname = "lzma-static"; - version = "5.2.5.2"; - sha256 = "12na1ycwrd7p50g19kgnb6kdgswnkwgzynaf0lyrv30qicpd8a5z"; + version = "5.2.5.4"; + sha256 = "0ql96kb7hg50d1flk36999p5p05bqs7rp7a59ys4q02423mq1z7b"; libraryHaskellDepends = [ base bytestring ]; testHaskellDepends = [ base bytestring HUnit QuickCheck tasty tasty-hunit tasty-quickcheck @@ -168534,8 +169001,8 @@ self: { }: mkDerivation { pname = "magma"; - version = "0.6.0.0"; - sha256 = "054drdwpks29mf22imwng8k6i7701yl9hijb4wh2a8wa4axssn9w"; + version = "0.6.1.0"; + sha256 = "08jbc29w6gw82z6jwhqwd123dh7nbxn6gs5hqqzj3d84ik268hzx"; libraryHaskellDepends = [ base deepseq profunctors semigroups ]; testHaskellDepends = [ base ghc-prim ]; description = "magma is an algebraic structure"; @@ -169851,7 +170318,6 @@ self: { ]; description = "Abstraction for HTML-embedded content"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "markup-preview" = callPackage @@ -170091,8 +170557,8 @@ self: { }: mkDerivation { pname = "massiv"; - version = "0.6.0.0"; - sha256 = "12p3gcrz3nwry99xhxfrz51aiswm5ira2hyxl4q1g3jfi8vwgcd0"; + version = "0.6.1.0"; + sha256 = "0j3br93kxxyb1q5mdf440f8l8d2lc0gi9vhc3h3ri94ls4ix099v"; libraryHaskellDepends = [ base bytestring deepseq exceptions primitive scheduler unliftio-core vector @@ -170233,6 +170699,7 @@ self: { description = "The project management tool for hackers"; license = lib.licenses.mit; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "mastermind" = callPackage @@ -170817,8 +171284,8 @@ self: { }: mkDerivation { pname = "matterhorn"; - version = "50200.12.0"; - sha256 = "0rsxgc4igcjhddfil01la1sbnglvr08mf7gfi9fr6pf7sb9w6qbq"; + version = "50200.13.0"; + sha256 = "1wyhqj7jvk94px3npid3lncyccv2xsc3rmfcw616xrf4xsqwisx2"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -170853,8 +171320,8 @@ self: { }: mkDerivation { pname = "mattermost-api"; - version = "50200.10.0"; - sha256 = "0pbp4f0gwhap8d9chn6c2zf22ic3r32302zir4a5r6cmgg4vscgd"; + version = "50200.11.0"; + sha256 = "0knrc00377wx8j4ly8d2nxqswybp3782j7qig6mrzlww6nbd68j7"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -170878,8 +171345,8 @@ self: { }: mkDerivation { pname = "mattermost-api-qc"; - version = "50200.10.0"; - sha256 = "0cv7l5g63ar7ii704j8q3y5hsvbmljm8cmgdw6p2shqigv8slzci"; + version = "50200.11.0"; + sha256 = "0crz0nc8qbsjyq3fllbj50d01axgwfas76bmr6xnz83sic2s1yw1"; libraryHaskellDepends = [ base containers mattermost-api QuickCheck text time ]; @@ -171222,8 +171689,8 @@ self: { }: mkDerivation { pname = "mcmc"; - version = "0.4.0.0"; - sha256 = "1wfp73qis73xmzxwbxx3r9z55x6ydk5c6j0daf81zyllkv4mw9v4"; + version = "0.5.0.0"; + sha256 = "0vfbbzk7rwgan0lf1qxr03mbxlxgq1jccbsvffw4hy1k2s65wysi"; libraryHaskellDepends = [ aeson base bytestring circular containers data-default deepseq directory dirichlet double-conversion log-domain microlens @@ -174839,8 +175306,8 @@ self: { }: mkDerivation { pname = "mixed-types-num"; - version = "0.5.3.1"; - sha256 = "1g19y0kkksx87i8azqndikpwans7061fj7z255vssl1x46vh843h"; + version = "0.5.8.0"; + sha256 = "1i40g6kf4my91i7xg54wfi6n2s8ivmx5k08ccqz3iycn6gha8pr7"; libraryHaskellDepends = [ base collect-errors hspec hspec-smallcheck mtl QuickCheck smallcheck template-haskell @@ -175454,6 +175921,8 @@ self: { ]; description = "Mock time in tests"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "mockazo" = callPackage @@ -176163,8 +176632,8 @@ self: { }: mkDerivation { pname = "monad-coroutine"; - version = "0.9.1"; - sha256 = "1d85jyfwf4h60cfp3dyrkmf7kw7ya37z2vqmv6rdbpqc1pslmb1i"; + version = "0.9.1.2"; + sha256 = "1s4975q1k23b2skyq9mwkkda08f2zxkv96x0yplzhz9n64kchhf3"; libraryHaskellDepends = [ base monad-parallel transformers transformers-compat ]; @@ -177267,8 +177736,8 @@ self: { }: mkDerivation { pname = "monadic-recursion-schemes"; - version = "0.1.12.0"; - sha256 = "0h5syc9p4imlf03qfb1rjsk4rq2kqry522zvw67x122q1xzdnwnw"; + version = "0.1.13.1"; + sha256 = "1lhawvr2nywdha59ci142xk1ijqp11pgn582zgb897zrqc2wbv7s"; libraryHaskellDepends = [ base comonad containers free mtl recursion-schemes transformers ]; @@ -177535,8 +178004,8 @@ self: { }: mkDerivation { pname = "mongoDB"; - version = "2.7.0.0"; - sha256 = "1gj97hfznhmfdvwdgf6fkizla2d9cy31933qw5i8p7fmh7igzgvk"; + version = "2.7.1.1"; + sha256 = "186ck64vk4s9jligj6mq3qbpm1mb87m7zs8p3jbizpv0fcgnwq70"; libraryHaskellDepends = [ array base base16-bytestring base64-bytestring binary bson bytestring conduit conduit-extra containers cryptohash @@ -177819,25 +178288,6 @@ self: { }) {}; "monoid-subclasses" = callPackage - ({ mkDerivation, base, bytestring, containers, primes, QuickCheck - , quickcheck-instances, tasty, tasty-quickcheck, text, vector - }: - mkDerivation { - pname = "monoid-subclasses"; - version = "1.0.1"; - sha256 = "16ypv15brywq8s403v0c586py3pw2gii8z2i91l71qjq95ii8b53"; - libraryHaskellDepends = [ - base bytestring containers primes text vector - ]; - testHaskellDepends = [ - base bytestring containers primes QuickCheck quickcheck-instances - tasty tasty-quickcheck text vector - ]; - description = "Subclasses of Monoid"; - license = lib.licenses.bsd3; - }) {}; - - "monoid-subclasses_1_1" = callPackage ({ mkDerivation, base, bytestring, containers, primes, QuickCheck , quickcheck-instances, tasty, tasty-quickcheck, text, vector }: @@ -177854,7 +178304,6 @@ self: { ]; description = "Subclasses of Monoid"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "monoid-transformer" = callPackage @@ -178098,6 +178547,21 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; + "moo-nad" = callPackage + ({ mkDerivation, base, dep-t, mtl, tasty, tasty-hunit, transformers + }: + mkDerivation { + pname = "moo-nad"; + version = "0.1.0.2"; + sha256 = "017yl4vy7apa6p91y4mhk4p36b4dgvwqdjplc38gijvk9zqd3rbm"; + libraryHaskellDepends = [ base dep-t mtl transformers ]; + testHaskellDepends = [ base dep-t mtl tasty tasty-hunit ]; + doHaddock = false; + description = "Invocation helpers for the ReaderT-record-of-functions style"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "moonshine" = callPackage ({ mkDerivation, aeson, base, bytestring, canteven-config, ekg , ekg-core, hslogger, snap, text, time, transformers, yaml @@ -178775,8 +179239,8 @@ self: { }: mkDerivation { pname = "mp"; - version = "1.1.0"; - sha256 = "1msy52c1702q16pmbzc69iyj7bj9xdh4c72d15sigblh9hwvipmm"; + version = "1.3.0"; + sha256 = "1491q33yc7if2j9akwxidn1xn3c9idxnjhq3n5izbbijbdg5qnmd"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -179061,7 +179525,11 @@ self: { testHaskellDepends = [ base HUnit ip text ]; description = "A Multipath TCP path manager"; license = lib.licenses.gpl3Only; + platforms = [ + "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" + ]; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "mpvguihs" = callPackage @@ -180143,12 +180611,13 @@ self: { }) {}; "multi-except" = callPackage - ({ mkDerivation, base, dlist, semigroupoids }: + ({ mkDerivation, base, dlist-nonempty, hspec, semigroupoids }: mkDerivation { pname = "multi-except"; - version = "0.1.1.0"; - sha256 = "18zs66sn31wjngi7iibf1wc3jz15c6rz6sx424n6j88nzwd3wzq7"; - libraryHaskellDepends = [ base dlist semigroupoids ]; + version = "0.3.0.0"; + sha256 = "1zk8cihmv5dimdhld0h0h622zsvn71rdbhslj4b8dh3dv4qdfji0"; + libraryHaskellDepends = [ base dlist-nonempty semigroupoids ]; + testHaskellDepends = [ base hspec semigroupoids ]; description = "Multiple Exceptions"; license = lib.licenses.mit; hydraPlatforms = lib.platforms.none; @@ -181152,8 +181621,8 @@ self: { }: mkDerivation { pname = "musicScroll"; - version = "0.3.2.1"; - sha256 = "0q6hglv26qpy1prx4is0jbhgb9xsxkpxbknyah9mcfn7c52cx0c0"; + version = "0.3.3"; + sha256 = "07c9yxazl8frl06s7jslg28716xi97azyx7i9pc06zmnag9p2k2z"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -181525,20 +181994,6 @@ self: { }) {}; "mwc-random" = callPackage - ({ mkDerivation, base, math-functions, primitive, time, vector }: - mkDerivation { - pname = "mwc-random"; - version = "0.14.0.0"; - sha256 = "18pg24sw3b79b32cwx8q01q4k0lm34mwr3l6cdkchl8alvd0wdq0"; - libraryHaskellDepends = [ - base math-functions primitive time vector - ]; - doCheck = false; - description = "Fast, high quality pseudo random number generation"; - license = lib.licenses.bsd3; - }) {}; - - "mwc-random_0_15_0_1" = callPackage ({ mkDerivation, base, bytestring, doctest, gauge, math-functions , mersenne-random, primitive, QuickCheck, random, tasty , tasty-hunit, tasty-quickcheck, time, vector @@ -181562,7 +182017,6 @@ self: { doCheck = false; description = "Fast, high quality pseudo random number generation"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "mwc-random-accelerate" = callPackage @@ -181877,7 +182331,8 @@ self: { }) {}; "mysql" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, hspec, mysql + ({ mkDerivation, base, bytestring, Cabal, containers, hspec + , libmysqlclient }: mkDerivation { pname = "mysql"; @@ -181885,11 +182340,11 @@ self: { sha256 = "16m8hv9yy2nf4jwgqg6n9z53n2pzskbc3gwbp2i3kgff8wsmf8sd"; setupHaskellDepends = [ base Cabal ]; libraryHaskellDepends = [ base bytestring containers ]; - librarySystemDepends = [ mysql ]; + librarySystemDepends = [ libmysqlclient ]; testHaskellDepends = [ base bytestring hspec ]; description = "A low-level MySQL client library"; license = lib.licenses.bsd3; - }) {inherit (pkgs) mysql;}; + }) {inherit (pkgs) libmysqlclient;}; "mysql-effect" = callPackage ({ mkDerivation, base, bytestring, extensible-effects, mysql @@ -183529,8 +183984,8 @@ self: { }: mkDerivation { pname = "net-mqtt"; - version = "0.7.1.0"; - sha256 = "1l19hmc3623gsx1yv0wcbgcy22p549zyrvfv44khzd45fl3fxfb7"; + version = "0.7.1.1"; + sha256 = "0iy39a2rncaasf5psjnsgkmigggx9apk9xvq354idw69b1bjhvnv"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -184181,16 +184636,14 @@ self: { license = lib.licenses.bsd3; }) {}; - "network_3_1_2_1" = callPackage + "network_3_1_2_2" = callPackage ({ mkDerivation, base, bytestring, deepseq, directory, hspec , hspec-discover, HUnit, QuickCheck, temporary }: mkDerivation { pname = "network"; - version = "3.1.2.1"; - sha256 = "0jlx8dls0h95znpcb66bd95k4mp3aaa733h89pq5ymyb8m29bapw"; - revision = "1"; - editedCabalFile = "12swsygnsnyvfjm3p9b6z8jh8vbw3q5akmggacsvr4fdm2p6v38q"; + version = "3.1.2.2"; + sha256 = "1dhflq7im3sjc6ascf12z73mhw7cqv1aqfvv3y5m9izr485jq0am"; libraryHaskellDepends = [ base bytestring deepseq directory ]; testHaskellDepends = [ base bytestring directory hspec HUnit QuickCheck temporary @@ -184369,8 +184822,8 @@ self: { pname = "network-bsd"; version = "2.8.1.0"; sha256 = "0kid0811lv4x761fd5gv6lsc8p5j2bn41rfd366pjb642p562jfr"; - revision = "3"; - editedCabalFile = "1hc3jdbmpq2wxh82xfx452v2m2l97jbdaqqbmj5nz4lljxa2696r"; + revision = "4"; + editedCabalFile = "1gd9a8j7fwg0jz0s6il5fk9sl0hm19ja1w56ix51wa0qi2h5x56d"; libraryHaskellDepends = [ base deepseq network ]; description = "POSIX network database () API"; license = lib.licenses.bsd3; @@ -186253,6 +186706,28 @@ self: { broken = true; }) {}; + "nix-graph" = callPackage + ({ mkDerivation, algebraic-graphs, attoparsec, base, containers + , hashable, nix-derivation, optparse-applicative, stm, text, ttrie + , unliftio + }: + mkDerivation { + pname = "nix-graph"; + version = "1.0.0.0"; + sha256 = "1hxby1xpzld55whpb1kzzdl3gi250svpl1lw5xw9qg10a3md29zh"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + algebraic-graphs attoparsec base containers hashable nix-derivation + stm text ttrie unliftio + ]; + executableHaskellDepends = [ + algebraic-graphs base optparse-applicative + ]; + description = "Reify the Nix build graph into a Haskell graph data structure"; + license = lib.licenses.bsd3; + }) {}; + "nix-narinfo" = callPackage ({ mkDerivation, attoparsec, base, containers, filepath, hspec , QuickCheck, text @@ -186311,6 +186786,8 @@ self: { ]; description = "Lightweight dependency management with Nix"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "nix-tools" = callPackage @@ -187007,8 +187484,8 @@ self: { pname = "nonce"; version = "1.0.7"; sha256 = "1q9ph0aq51mvdvydnriqd12sfin36pfb8f588zgac1ybn8r64ksb"; - revision = "1"; - editedCabalFile = "1i6f4nwp4xn31as6plqrf6wp6gn3ylwdi77h99572jy7p3985aw1"; + revision = "2"; + editedCabalFile = "09xvg4lpmb1hw153afhbjrdg9v3npfwpdfhpv5y8b0qvb4zi3n9q"; libraryHaskellDepends = [ base base64-bytestring bytestring entropy text transformers unliftio unliftio-core @@ -187595,6 +188072,29 @@ self: { license = lib.licenses.bsd3; }) {}; + "nri-http" = callPackage + ({ mkDerivation, aeson, base, bytestring, conduit, http-client + , http-client-tls, http-types, mime-types, network-uri + , nri-observability, nri-prelude, safe-exceptions, text, wai, warp + }: + mkDerivation { + pname = "nri-http"; + version = "0.1.0.1"; + sha256 = "11zrqfljnq922frbsyiwap8ayp8faq7cwbrmk0npg4qgv4gv2pz2"; + libraryHaskellDepends = [ + aeson base bytestring conduit http-client http-client-tls + http-types mime-types network-uri nri-observability nri-prelude + safe-exceptions text + ]; + testHaskellDepends = [ + aeson base bytestring conduit http-client http-client-tls + http-types mime-types network-uri nri-observability nri-prelude + safe-exceptions text wai warp + ]; + description = "Make Elm style HTTP requests"; + license = lib.licenses.bsd3; + }) {}; + "nri-observability" = callPackage ({ mkDerivation, aeson, aeson-pretty, async, base, bugsnag-hs , bytestring, directory, hostname, http-client, http-client-tls @@ -187603,8 +188103,8 @@ self: { }: mkDerivation { pname = "nri-observability"; - version = "0.1.0.2"; - sha256 = "19nil7vyjbvbjlapvrxky8fkxdl3f2xhqdi3a5m5i5lyawm74b6z"; + version = "0.1.0.3"; + sha256 = "0njpgc873rh09hkg7pnagkmmrd8nibdq4q1p44wa3n71xzwzy771"; libraryHaskellDepends = [ aeson aeson-pretty async base bugsnag-hs bytestring directory hostname http-client http-client-tls nri-env-parser nri-prelude @@ -187619,32 +188119,97 @@ self: { license = lib.licenses.bsd3; }) {}; + "nri-observability_0_1_1_0" = callPackage + ({ mkDerivation, aeson, aeson-pretty, async, base, bugsnag-hs + , bytestring, directory, hostname, http-client, http-client-tls + , nri-env-parser, nri-prelude, random, safe-exceptions, stm, text + , time, unordered-containers, uuid + }: + mkDerivation { + pname = "nri-observability"; + version = "0.1.1.0"; + sha256 = "17zr60z6i07cnqs6x2r3lzd5hk0g8sh10hyckh84ynyjpdzksggd"; + libraryHaskellDepends = [ + aeson aeson-pretty async base bugsnag-hs bytestring directory + hostname http-client http-client-tls nri-env-parser nri-prelude + random safe-exceptions stm text time unordered-containers uuid + ]; + testHaskellDepends = [ + aeson aeson-pretty async base bugsnag-hs bytestring directory + hostname http-client http-client-tls nri-env-parser nri-prelude + random safe-exceptions stm text time unordered-containers uuid + ]; + description = "Report log spans collected by nri-prelude"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "nri-prelude" = callPackage ({ mkDerivation, aeson, aeson-pretty, async, auto-update, base , bytestring, containers, directory, exceptions, filepath, ghc , hedgehog, junit-xml, pretty-diff, pretty-show, safe-coloured-text - , safe-exceptions, terminal-size, text, time, vector + , safe-coloured-text-terminfo, safe-exceptions, terminal-size, text + , time, vector }: mkDerivation { pname = "nri-prelude"; - version = "0.6.0.0"; - sha256 = "02v83n08zxz8521skijgrn407a0mlkjc3fjn5q04gn932wf29g5s"; + version = "0.6.0.2"; + sha256 = "002bq6qwaiw4v30b677hg8pv2sa9iaqdv90h02fbq4pkhqsqhpkw"; libraryHaskellDepends = [ aeson aeson-pretty async auto-update base bytestring containers directory exceptions filepath ghc hedgehog junit-xml pretty-diff - pretty-show safe-coloured-text safe-exceptions terminal-size text - time vector + pretty-show safe-coloured-text safe-coloured-text-terminfo + safe-exceptions terminal-size text time vector ]; testHaskellDepends = [ aeson aeson-pretty async auto-update base bytestring containers directory exceptions filepath ghc hedgehog junit-xml pretty-diff - pretty-show safe-coloured-text safe-exceptions terminal-size text - time vector + pretty-show safe-coloured-text safe-coloured-text-terminfo + safe-exceptions terminal-size text time vector ]; description = "A Prelude inspired by the Elm programming language"; license = lib.licenses.bsd3; }) {}; + "nri-redis" = callPackage + ({ mkDerivation, aeson, async, base, bytestring, conduit, hedis + , nri-env-parser, nri-observability, nri-prelude, resourcet + , safe-exceptions, text, unordered-containers, uuid + }: + mkDerivation { + pname = "nri-redis"; + version = "0.1.0.0"; + sha256 = "00im3rnb7w45xm60l42kzrj3sc9dg3098w988fdhdschwk34zqpc"; + libraryHaskellDepends = [ + aeson async base bytestring conduit hedis nri-env-parser + nri-observability nri-prelude resourcet safe-exceptions text + unordered-containers uuid + ]; + testHaskellDepends = [ + aeson async base bytestring conduit hedis nri-env-parser + nri-observability nri-prelude resourcet safe-exceptions text + unordered-containers uuid + ]; + description = "An intuitive hedis wrapper library"; + license = lib.licenses.bsd3; + }) {}; + + "nri-test-encoding" = callPackage + ({ mkDerivation, aeson, aeson-pretty, base, bytestring, filepath + , nri-prelude, servant, servant-auth-server, servant-server, text + }: + mkDerivation { + pname = "nri-test-encoding"; + version = "0.1.0.0"; + sha256 = "11vk1f99xbqs678rxldxh9qfwailinxpjl6q6pvikb8f32rrb74y"; + libraryHaskellDepends = [ + aeson aeson-pretty base bytestring filepath nri-prelude servant + servant-auth-server servant-server text + ]; + description = "A library to simplify writing golden tests for encoding types"; + license = lib.licenses.bsd3; + }) {}; + "nsis" = callPackage ({ mkDerivation, base, directory, process, transformers, uniplate }: @@ -188161,18 +188726,32 @@ self: { broken = true; }) {}; + "numhask_0_8_0_0" = callPackage + ({ mkDerivation, base, doctest, QuickCheck }: + mkDerivation { + pname = "numhask"; + version = "0.8.0.0"; + sha256 = "104vc3b43lbck6r39kv5rscvqx3hxxf8nyvzsw8shb9xifmnijkh"; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ base doctest QuickCheck ]; + description = "A numeric class hierarchy"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "numhask-array" = callPackage - ({ mkDerivation, adjunctions, base, deepseq, distributive, doctest - , numhask, vector + ({ mkDerivation, adjunctions, base, distributive, doctest, numhask + , vector }: mkDerivation { pname = "numhask-array"; - version = "0.8.0"; - sha256 = "03c12d34s20f01vc9kpgrm3n4xi8h4kqzlndj1ncpqb69xx3fhc5"; + version = "0.9.0"; + sha256 = "09l0cm2f66c5bagrwby8bj22b6lklbi8mbsgxxh0gw5zvb9bhgmr"; libraryHaskellDepends = [ - adjunctions base deepseq distributive numhask vector + adjunctions base distributive numhask vector ]; - testHaskellDepends = [ base doctest numhask ]; + testHaskellDepends = [ base doctest ]; description = "Multi-dimensional array interface for numhask"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; @@ -188273,13 +188852,13 @@ self: { }: mkDerivation { pname = "numhask-space"; - version = "0.7.1.0"; - sha256 = "1wn4fi2778dxmqfimwx9favwd6v507vzpwms04w2bk5gn1fxgcdg"; + version = "0.8.0.0"; + sha256 = "1ya4fcr0mxj4blijl2k2sdfkkywjmr616qcaddl7zqphjvrc4gd0"; libraryHaskellDepends = [ adjunctions base containers distributive numhask random semigroupoids tdigest text time vector ]; - testHaskellDepends = [ base doctest numhask ]; + testHaskellDepends = [ base doctest ]; description = "Numerical spaces"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; @@ -188329,10 +188908,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "numtype-dk"; - version = "0.5.0.2"; - sha256 = "0avkdbhxijcja9i9g3cqh699mys8nhsxgrrpkknycmqpvp07sy4q"; - revision = "1"; - editedCabalFile = "0892xm8vyyvl1glg4vniz8r5ydg1nz3zmbpgk5mxdih6wi6nmpy4"; + version = "0.5.0.3"; + sha256 = "17mxqw82l3p0n18bjyyxbbnjvwqny4s3fkyj8vgj0ygw9ma534zl"; libraryHaskellDepends = [ base ]; description = "Type-level integers, using TypeNats, Data Kinds, and Closed Type Families"; license = lib.licenses.bsd3; @@ -188389,23 +188966,28 @@ self: { }) {}; "nvfetcher" = callPackage - ({ mkDerivation, aeson, base, binary, bytestring, extra, free - , neat-interpolation, shake, text, tomland, transformers - , unordered-containers, validation-selective + ({ mkDerivation, aeson, base, binary, binary-instances, bytestring + , containers, data-default, extra, free, microlens, microlens-th + , neat-interpolation, optparse-simple, parsec, shake, text, tomland + , transformers, unordered-containers, validation-selective }: mkDerivation { pname = "nvfetcher"; - version = "0.1.0.0"; - sha256 = "1flzivh84fxik5zw3n8j4b65lh8cxd15mjh72y4622rnlnfn2xvv"; + version = "0.3.0.0"; + sha256 = "1b6kb7qlnrg74ymhj74ikqs80hmg013vv4rc7sdkb0pfs3l6f6mh"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson base binary bytestring extra free neat-interpolation shake - text transformers unordered-containers + aeson base binary binary-instances bytestring containers + data-default extra free microlens microlens-th neat-interpolation + optparse-simple parsec shake text tomland transformers + unordered-containers ]; executableHaskellDepends = [ - aeson base binary bytestring extra free neat-interpolation shake - text tomland transformers unordered-containers validation-selective + aeson base binary binary-instances bytestring containers + data-default extra free microlens microlens-th neat-interpolation + optparse-simple parsec shake text tomland transformers + unordered-containers validation-selective ]; description = "Generate nix sources expr for the latest version of packages"; license = lib.licenses.mit; @@ -188595,21 +189177,20 @@ self: { "o-clock" = callPackage ({ mkDerivation, base, doctest, ghc-prim, Glob, hedgehog - , markdown-unlit, tasty, tasty-hedgehog, tasty-hspec, type-spec + , hspec-expectations, markdown-unlit, tasty, tasty-hedgehog + , tasty-hunit-compat, type-spec }: mkDerivation { pname = "o-clock"; - version = "1.2.0.1"; - sha256 = "039p0jjpmlkbz21szfj4abnjyi0k34m6b8fqpsmyj94nbq1qldy4"; - revision = "1"; - editedCabalFile = "0fxgbi56x61sm84qwks1hk8maxn7zl4jfbhgxfwq6w0jg1xdqdhm"; + version = "1.2.1"; + sha256 = "17y44aajipysw1p268rq8a6lhv9cdhkvxjcpcdij93sqp818q96z"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base ghc-prim ]; executableHaskellDepends = [ base ]; testHaskellDepends = [ - base doctest Glob hedgehog markdown-unlit tasty tasty-hedgehog - tasty-hspec type-spec + base doctest Glob hedgehog hspec-expectations markdown-unlit tasty + tasty-hedgehog tasty-hunit-compat type-spec ]; testToolDepends = [ doctest markdown-unlit ]; description = "Type-safe time library"; @@ -188902,8 +189483,8 @@ self: { ({ mkDerivation, base, containers }: mkDerivation { pname = "observable-sharing"; - version = "0.2.4"; - sha256 = "1lqig0r4f7gqjdymsc4jpwspc3jr01xkmk5cgiqr5ngxvk6zw3j0"; + version = "0.2.5"; + sha256 = "06mz3snyqx7b67dl786mwsc75nfnq3a40p581rhaf1y4r7cr6iv6"; libraryHaskellDepends = [ base containers ]; description = "Simple observable sharing"; license = lib.licenses.bsd3; @@ -189085,20 +189666,21 @@ self: { inherit (pkgs) systemd;}; "odbc" = callPackage - ({ mkDerivation, async, base, bytestring, containers, deepseq - , formatting, hspec, optparse-applicative, parsec, QuickCheck - , semigroups, template-haskell, text, time, transformers, unixODBC - , unliftio-core, weigh + ({ mkDerivation, async, attoparsec, base, bytestring, containers + , deepseq, formatting, hashable, hspec, optparse-applicative + , parsec, QuickCheck, semigroups, template-haskell, text, time + , transformers, unixODBC, unliftio-core, weigh }: mkDerivation { pname = "odbc"; - version = "0.2.2"; - sha256 = "0dkkkrv43kl3643i0j4hgj1mcsk1jhrl086dygd6hqb9hd4156k5"; + version = "0.2.5"; + sha256 = "157g6ys5j5kj4cc1jp2rmcpwrax4fh7bx1zvvicmrf88qaq56v2h"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - async base bytestring containers deepseq formatting parsec - semigroups template-haskell text time transformers unliftio-core + async attoparsec base bytestring containers deepseq formatting + hashable parsec semigroups template-haskell text time transformers + unliftio-core ]; librarySystemDepends = [ unixODBC ]; executableHaskellDepends = [ @@ -189934,6 +190516,35 @@ self: { license = lib.licenses.bsd3; }) {}; + "opaleye_0_7_2_0" = callPackage + ({ mkDerivation, aeson, base, base16-bytestring, bytestring + , case-insensitive, containers, contravariant, dotenv, hspec + , hspec-discover, multiset, postgresql-simple, pretty + , product-profunctors, profunctors, QuickCheck, scientific + , semigroups, text, time, time-locale-compat, transformers, uuid + , void + }: + mkDerivation { + pname = "opaleye"; + version = "0.7.2.0"; + sha256 = "1qz34isgb5hl2ab5vij3zw1h3xwvl3a0d1k02n156xszibnkcgf1"; + libraryHaskellDepends = [ + aeson base base16-bytestring bytestring case-insensitive + contravariant postgresql-simple pretty product-profunctors + profunctors scientific semigroups text time time-locale-compat + transformers uuid void + ]; + testHaskellDepends = [ + aeson base bytestring containers contravariant dotenv hspec + hspec-discover multiset postgresql-simple product-profunctors + profunctors QuickCheck semigroups text time transformers uuid + ]; + testToolDepends = [ hspec-discover ]; + description = "An SQL-generating DSL targeting PostgreSQL"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "opaleye-classy" = callPackage ({ mkDerivation, base, bytestring, lens, mtl, opaleye , postgresql-simple, product-profunctors, transformers @@ -190203,6 +190814,8 @@ self: { ]; description = "Unofficial OpenAI servant types"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "openapi-petstore" = callPackage @@ -190585,8 +191198,8 @@ self: { }: mkDerivation { pname = "openid-connect"; - version = "0.1.0.0"; - sha256 = "12qp155dazycypv0fvw8mbh3rl5j5ybd2vyfga8wi55n16v1w8mv"; + version = "0.1.1"; + sha256 = "16qqndcvbs30nraik0ida1dw40hk3k9mi318dnqnjx64x6wvcgmr"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -190810,8 +191423,8 @@ self: { }: mkDerivation { pname = "opentelemetry"; - version = "0.6.1"; - sha256 = "0i88ciig40gil4gaj95qw28c2racdr2jb6rcpnsf60fzkqc8b3fk"; + version = "0.7.0"; + sha256 = "10k9if33ydjc099mgjvgglp6fcmrz0zxpv6khwkhra6lcz35mylv"; libraryHaskellDepends = [ base bytestring exceptions ghc-trace-events hashable ]; @@ -190819,24 +191432,24 @@ self: { }) {}; "opentelemetry-extra" = callPackage - ({ mkDerivation, aeson, async, base, binary, bytestring, clock - , containers, directory, exceptions, filepath, gauge - , generic-arbitrary, ghc-events, hashable, hashtables, http-client - , http-client-tls, http-types, hvega, opentelemetry, process - , QuickCheck, quickcheck-instances, random, scientific, splitmix - , stm, tasty, tasty-discover, tasty-hunit, tasty-quickcheck, text + ({ mkDerivation, async, base, binary, bytestring, clock, containers + , directory, exceptions, filepath, generic-arbitrary, ghc-events + , hashable, hashtables, http-client, http-client-tls, http-types + , hvega, jsonifier, opentelemetry, process, QuickCheck + , quickcheck-instances, random, scientific, splitmix, stm, tasty + , tasty-bench, tasty-discover, tasty-hunit, tasty-quickcheck, text , text-show, typed-process, unordered-containers }: mkDerivation { pname = "opentelemetry-extra"; - version = "0.6.1"; - sha256 = "0ggxkhcrjj8sg6zf9jnp1j05wwlsay6k95c79j9j3dvw8qy2yjbx"; + version = "0.7.0"; + sha256 = "11lwhm3rpajmch7kjb4qwngram5ka8fbd3c0mxszlf4a9dlqag32"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson async base binary bytestring clock containers directory - exceptions filepath ghc-events hashable http-client http-client-tls - http-types opentelemetry random scientific splitmix stm text + async base binary bytestring clock containers directory exceptions + filepath ghc-events hashable http-client http-client-tls http-types + jsonifier opentelemetry random scientific splitmix stm text text-show unordered-containers ]; executableHaskellDepends = [ @@ -190850,7 +191463,7 @@ self: { tasty-hunit tasty-quickcheck text text-show unordered-containers ]; testToolDepends = [ tasty-discover ]; - benchmarkHaskellDepends = [ base gauge opentelemetry ]; + benchmarkHaskellDepends = [ base opentelemetry tasty-bench ]; license = lib.licenses.asl20; }) {}; @@ -190870,7 +191483,7 @@ self: { }) {}; "opentelemetry-lightstep" = callPackage - ({ mkDerivation, aeson, async, base, bytestring, clock, containers + ({ mkDerivation, async, base, bytestring, clock, containers , exceptions, filepath, ghc-events, http-client, http-client-tls , http-types, network, opentelemetry, opentelemetry-extra , scientific, splitmix, stm, text, typed-process @@ -190878,12 +191491,12 @@ self: { }: mkDerivation { pname = "opentelemetry-lightstep"; - version = "0.6.1"; - sha256 = "1a7rrm5aahqh63j0rr7nvd4y3q64m8qr7is0r0a17fwkkpppmyln"; + version = "0.7.0"; + sha256 = "1yd6gzhwwmjjh41ipz2kifzpn7hha9nli3war2rqdjvhj349lrw8"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson async base bytestring exceptions http-client http-client-tls + async base bytestring exceptions http-client http-client-tls http-types network opentelemetry opentelemetry-extra scientific stm text unordered-containers ]; @@ -190901,8 +191514,8 @@ self: { }: mkDerivation { pname = "opentelemetry-wai"; - version = "0.6.1"; - sha256 = "0g1a044sphd35z9crc8wbxsk4hfh1gpfi4g8rr1k4f842hznj7nf"; + version = "0.7.0"; + sha256 = "09mh8kfh49vx2gascwwmzs4s649sm5i90nsifp76kjvg1nvqhd1m"; libraryHaskellDepends = [ base bytestring http-types opentelemetry text wai ]; @@ -191152,8 +191765,8 @@ self: { }: mkDerivation { pname = "opentracing"; - version = "0.1.0.0"; - sha256 = "0j791hv525mcskqmji3f9n8v803pailm8jrl336pxzdh3iacqvsl"; + version = "0.2.0"; + sha256 = "1yl3hhg32npj4ncqc9j5gl2jikzvczkpnrwp124nk45mzi13aszq"; libraryHaskellDepends = [ aeson async base base64-bytestring bytestring case-insensitive clock containers http-types iproute lens mtl mwc-random network @@ -191168,8 +191781,8 @@ self: { ({ mkDerivation, base, http-client, lens, mtl, opentracing, text }: mkDerivation { pname = "opentracing-http-client"; - version = "0.1.0.0"; - sha256 = "1jzdnlk2cacmymjkcfx4n569n6gqy6kwzh9dxrgjnagwh3jqk7q3"; + version = "0.2.0"; + sha256 = "19mwl69ggyd7zf1dvx5yjzsq5mlw5l94h989hgwc4ryvp8zqwv4n"; libraryHaskellDepends = [ base http-client lens mtl opentracing text ]; @@ -191179,18 +191792,18 @@ self: { "opentracing-jaeger" = callPackage ({ mkDerivation, base, bytestring, exceptions, hashable - , http-client, http-types, lens, mtl, network, opentracing - , QuickCheck, safe-exceptions, text, thrift, unordered-containers - , vector + , http-client, http-types, lens, mtl, network, opentracing, pinch + , QuickCheck, safe-exceptions, text, unordered-containers, vector + , vector-instances }: mkDerivation { pname = "opentracing-jaeger"; - version = "0.1.0.0"; - sha256 = "1yr9vhbpqq12hj9blv3v1wc26n9qsp0g7pjngxh0k1zcv759s1k0"; + version = "0.2.0"; + sha256 = "0ffcbmg8qzvyhm7vzk2zkk5czli4ndrp18cc328i7600gzv1gr81"; libraryHaskellDepends = [ base bytestring exceptions hashable http-client http-types lens mtl - network opentracing QuickCheck safe-exceptions text thrift - unordered-containers vector + network opentracing pinch QuickCheck safe-exceptions text + unordered-containers vector vector-instances ]; description = "Jaeger backend for OpenTracing"; license = lib.licenses.asl20; @@ -191201,8 +191814,8 @@ self: { ({ mkDerivation, base, lens, opentracing, text, wai }: mkDerivation { pname = "opentracing-wai"; - version = "0.1.0.0"; - sha256 = "1m68l4gxpyl81yhkd209kdgzydzyg632x8gl2jh3l4k83ysdg545"; + version = "0.2.0"; + sha256 = "178xxgg0rw94gld5jlvix6czsvg66q60h06nj2b1x7rnd0pjryc6"; libraryHaskellDepends = [ base lens opentracing text wai ]; description = "Middleware adding OpenTracing tracing for WAI applications"; license = lib.licenses.asl20; @@ -191212,8 +191825,8 @@ self: { ({ mkDerivation, aeson, base, opentracing, text }: mkDerivation { pname = "opentracing-zipkin-common"; - version = "0.1.0.0"; - sha256 = "00pg2k0v685gc4fmrcb464fapvpz8lw0249n6gmi2zkhpw8frnm0"; + version = "0.2.0"; + sha256 = "0yngiz8135v844wcx28izwhx18iz06di3dl8bm5xqh47ir43wdw6"; libraryHaskellDepends = [ aeson base opentracing text ]; description = "Zipkin OpenTracing Backend Commons"; license = lib.licenses.asl20; @@ -191222,17 +191835,17 @@ self: { "opentracing-zipkin-v1" = callPackage ({ mkDerivation, base, bytestring, exceptions, hashable , http-client, http-types, iproute, lens, opentracing - , opentracing-zipkin-common, QuickCheck, text, thrift - , unordered-containers, vector + , opentracing-zipkin-common, pinch, QuickCheck, text + , unordered-containers, vector, vector-instances }: mkDerivation { pname = "opentracing-zipkin-v1"; - version = "0.1.0.0"; - sha256 = "0mw6x9jqh42ymn1a3maq47mw1mbzki5lv1axapqkhkx0w13824pp"; + version = "0.2.0"; + sha256 = "15n9m7affy81fr80zw7l54lch7gr6bvhcqpga797x7rvdxqqjv9j"; libraryHaskellDepends = [ base bytestring exceptions hashable http-client http-types iproute - lens opentracing opentracing-zipkin-common QuickCheck text thrift - unordered-containers vector + lens opentracing opentracing-zipkin-common pinch QuickCheck text + unordered-containers vector vector-instances ]; description = "Zipkin V1 backend for OpenTracing"; license = lib.licenses.asl20; @@ -191246,8 +191859,8 @@ self: { }: mkDerivation { pname = "opentracing-zipkin-v2"; - version = "0.1.0.0"; - sha256 = "0rmrlx2g228p4ys95d4zqc0l56a62avsawq320g4n9i2g0hrl5n4"; + version = "0.2.0"; + sha256 = "1ykssjhknfyiw02abjpz38zmlw8l03zb8c3y3ic5njmsg23nxfzb"; libraryHaskellDepends = [ aeson base base64-bytestring bytestring exceptions http-client http-types lens opentracing opentracing-zipkin-common text @@ -191950,6 +192563,20 @@ self: { license = lib.licenses.bsd3; }) {}; + "opusfile" = callPackage + ({ mkDerivation, base, bytestring, opusfile }: + mkDerivation { + pname = "opusfile"; + version = "0.1.0.0"; + sha256 = "12mjkmsffnid48sjc6j1wrikw4pl1yz5jk6bgnarv86wcs30w54a"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base bytestring ]; + librarySystemDepends = [ opusfile ]; + description = "FFI bindings for libopusfile"; + license = lib.licenses.bsd3; + }) {inherit (pkgs) opusfile;}; + "orbits" = callPackage ({ mkDerivation, ad, base, Cabal, cabal-doctest, checkers, doctest , exact-real, lens, linear, QuickCheck, random, tagged, tasty @@ -192174,8 +192801,8 @@ self: { }: mkDerivation { pname = "ordinal"; - version = "0.4.0.3"; - sha256 = "1ar7l68cx9zci7mi6qx7a6ja7vp9axxjczyzxrbnjrvd2k3zxg51"; + version = "0.4.0.6"; + sha256 = "0zpqhyn8f2iphgz2746fxsjk817ly8q6s4dz6129jrrd25v3kdc7"; libraryHaskellDepends = [ base containers data-default QuickCheck regex template-haskell text time vector @@ -192222,17 +192849,19 @@ self: { "org-mode" = callPackage ({ mkDerivation, base, containers, filepath, hashable, megaparsec - , parser-combinators, tasty, tasty-hunit, text + , parser-combinators, tasty, tasty-hunit, text, time }: mkDerivation { pname = "org-mode"; - version = "1.1.1"; - sha256 = "0kbfgafv3xkgczz27ap7xyqfvvn8a6sizc9h3ylklc8qrw38n149"; + version = "2.0.0"; + sha256 = "17yn9si0mxyydjgv40q6rc5nw579kswlx69ycyinhdx0q34ds7rl"; libraryHaskellDepends = [ base containers filepath hashable megaparsec parser-combinators - text + text time + ]; + testHaskellDepends = [ + base megaparsec tasty tasty-hunit text time ]; - testHaskellDepends = [ base megaparsec tasty tasty-hunit text ]; description = "Parser for Emacs org-mode files"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; @@ -192244,8 +192873,8 @@ self: { }: mkDerivation { pname = "org-mode-lucid"; - version = "1.6.0"; - sha256 = "0qkar6cwmz67zm2jlah1yi004vap8d136167qwvm485cpd3vwxz7"; + version = "1.6.1"; + sha256 = "0fkwwwrmfq22g1yak9srmlbq5yixf4kdwfapq0dyr8f3pqaglf1v"; libraryHaskellDepends = [ base containers hashable lucid org-mode text ]; @@ -193120,6 +193749,25 @@ self: { broken = true; }) {}; + "packstream" = callPackage + ({ mkDerivation, base, binary, bytestring, containers + , data-binary-ieee754, hspec, mtl, text + }: + mkDerivation { + pname = "packstream"; + version = "0.1.0.2"; + sha256 = "0skp7n6y9wzsa4mr456cpmqw0fzyb5613hqw7fs0qyzwb5swna2c"; + libraryHaskellDepends = [ + base binary bytestring containers data-binary-ieee754 mtl text + ]; + testHaskellDepends = [ + base binary bytestring containers data-binary-ieee754 hspec mtl + text + ]; + description = "PackStream converter for Neo4j BOLT protocol"; + license = lib.licenses.bsd3; + }) {}; + "packunused" = callPackage ({ mkDerivation, base, Cabal, directory, filepath, haskell-src-exts , optparse-applicative, process, split @@ -193456,6 +194104,7 @@ self: { description = "Parse syslog traffic from PAN-OS"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "panda" = callPackage @@ -193480,7 +194129,7 @@ self: { }) {}; "pandoc" = callPackage - ({ mkDerivation, aeson, aeson-pretty, attoparsec, base + ({ mkDerivation, aeson, aeson-pretty, array, attoparsec, base , base64-bytestring, binary, blaze-html, blaze-markup, bytestring , case-insensitive, citeproc, commonmark, commonmark-extensions , commonmark-pandoc, connection, containers, data-default, deepseq @@ -193493,19 +194142,19 @@ self: { , scientific, SHA, skylighting, skylighting-core, split, syb , tagsoup, tasty, tasty-bench, tasty-golden, tasty-hunit, tasty-lua , tasty-quickcheck, temporary, texmath, text, text-conversions - , time, unicode-transforms, unix, unordered-containers, xml - , xml-conduit, zip-archive, zlib + , time, unicode-collation, unicode-transforms, unix + , unordered-containers, xml, xml-conduit, zip-archive, zlib }: mkDerivation { pname = "pandoc"; - version = "2.13"; - sha256 = "1f725bbazqw81gfw3wn8ii8pb4qj5z49jibl1l4l972gsgfbmgrh"; + version = "2.14.0.2"; + sha256 = "1jnckx29l6plg1zbkjdfj530djjl8zszwr54zsg0k0is4pcswa9f"; configureFlags = [ "-fhttps" "-f-trypandoc" ]; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; libraryHaskellDepends = [ - aeson aeson-pretty attoparsec base base64-bytestring binary + aeson aeson-pretty array attoparsec base base64-bytestring binary blaze-html blaze-markup bytestring case-insensitive citeproc commonmark commonmark-extensions commonmark-pandoc connection containers data-default deepseq directory doclayout doctemplates @@ -193515,8 +194164,8 @@ self: { JuicyPixels mtl network network-uri pandoc-types parsec process random safe scientific SHA skylighting skylighting-core split syb tagsoup temporary texmath text text-conversions time - unicode-transforms unix unordered-containers xml xml-conduit - zip-archive zlib + unicode-collation unicode-transforms unix unordered-containers xml + xml-conduit zip-archive zlib ]; executableHaskellDepends = [ base ]; testHaskellDepends = [ @@ -193592,39 +194241,36 @@ self: { }) {}; "pandoc-crossref" = callPackage - ({ mkDerivation, base, containers, data-accessor - , data-accessor-template, data-accessor-transformers, data-default - , deepseq, directory, filepath, gitrev, hspec, mtl, open-browser - , optparse-applicative, pandoc, pandoc-types, roman-numerals, syb - , template-haskell, temporary, text, utility-ht + ({ mkDerivation, base, containers, criterion, data-default, deepseq + , directory, filepath, gitrev, hspec, microlens, microlens-mtl + , microlens-th, mtl, open-browser, optparse-applicative, pandoc + , pandoc-types, roman-numerals, syb, template-haskell, temporary + , text, utility-ht }: mkDerivation { pname = "pandoc-crossref"; - version = "0.3.10.0"; - sha256 = "1yymm8y9hzkbjff7cn63qsvpfks1f1n741vfdiiga66kml8v0zdm"; - revision = "1"; - editedCabalFile = "0grjcp8r5fh41qnn3miw6bms3ml9v6n1rjb2yvimf1v69w61nlgq"; + version = "0.3.12.0"; + sha256 = "0y991lp6bgjiz67b1w6jywhwzwq5kf385pzl91s4g22lfnhwc7sz"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; libraryHaskellDepends = [ - base containers data-accessor data-accessor-template - data-accessor-transformers data-default directory filepath mtl - pandoc pandoc-types roman-numerals syb template-haskell text - utility-ht + base containers data-default directory filepath microlens + microlens-mtl microlens-th mtl pandoc pandoc-types roman-numerals + syb template-haskell text utility-ht ]; executableHaskellDepends = [ - base containers data-accessor data-accessor-template - data-accessor-transformers data-default deepseq directory filepath - gitrev mtl open-browser optparse-applicative pandoc pandoc-types - roman-numerals syb template-haskell temporary text utility-ht + base deepseq gitrev open-browser optparse-applicative pandoc + pandoc-types template-haskell temporary text ]; testHaskellDepends = [ - base containers data-accessor data-accessor-template - data-accessor-transformers data-default directory filepath hspec - mtl pandoc pandoc-types roman-numerals syb template-haskell text - utility-ht + base containers data-default directory filepath hspec microlens mtl + pandoc pandoc-types text ]; + benchmarkHaskellDepends = [ + base criterion pandoc pandoc-types text + ]; + doHaddock = false; description = "Pandoc filter for cross-references"; license = lib.licenses.gpl2Only; }) {}; @@ -193916,25 +194562,25 @@ self: { "pandoc-plot" = callPackage ({ mkDerivation, base, bytestring, containers, criterion - , data-default, directory, filepath, githash, hashable, hspec + , data-default, directory, filepath, gitrev, hashable, hspec , hspec-expectations, lifted-async, lifted-base, mtl , optparse-applicative, pandoc, pandoc-types, shakespeare, tagsoup , tasty, tasty-hspec, tasty-hunit, template-haskell, text - , typed-process, yaml + , typed-process, unix, yaml }: mkDerivation { pname = "pandoc-plot"; - version = "1.2.1"; - sha256 = "1jz8q3qv9m837zwl2lhrcqfjmfs08gcv7qfxiw3w21nfl8gxbgqx"; + version = "1.2.3"; + sha256 = "0r7xymgkk2c3fmdfk4vljdwbl2k3jrk40aa7f7y277fp5nxnqgp8"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base bytestring containers data-default directory filepath hashable lifted-async lifted-base mtl pandoc pandoc-types shakespeare - tagsoup template-haskell text typed-process yaml + tagsoup template-haskell text typed-process unix yaml ]; executableHaskellDepends = [ - base containers directory filepath githash optparse-applicative + base containers directory filepath gitrev optparse-applicative pandoc pandoc-types template-haskell text typed-process ]; testHaskellDepends = [ @@ -194101,8 +194747,8 @@ self: { ({ mkDerivation }: mkDerivation { pname = "pandora"; - version = "0.4.1"; - sha256 = "0gn47zw0rzvdj1d1gwqy49di6f8lpvy53wfcs2g163nz9vil8xka"; + version = "0.4.2"; + sha256 = "1gn3bl9nls9rqn2mdxdiaik740l2g8ji7djn6626j4jnmvwkcwks"; description = "A box of patterns and paradigms"; license = lib.licenses.mit; }) {}; @@ -194267,8 +194913,8 @@ self: { }: mkDerivation { pname = "pantry"; - version = "0.5.2.1"; - sha256 = "0g1v78mgxa6mn0vm6yii3nzfdwpn4hgrlcld1h3mbwaxn6c8116k"; + version = "0.5.2.2"; + sha256 = "05ykb6jn19jiakrn6mdcz3gyc6v6hkg3r8drwxncf04syz0l60mm"; libraryHaskellDepends = [ aeson ansi-terminal base bytestring Cabal casa-client casa-types conduit conduit-extra containers cryptonite cryptonite-conduit @@ -194872,10 +195518,8 @@ self: { ({ mkDerivation, base, containers, extensible-exceptions, random }: mkDerivation { pname = "parallel-io"; - version = "0.3.3"; - sha256 = "0i86x3bf8pjlg6mdg1zg5lcrjpg75pbqs2mrgrbp4z4bkcmw051s"; - revision = "2"; - editedCabalFile = "0mggzni708nzxlsjbibdzf03s3b5lnqj2zi1hnbh1rd4j4jr07ym"; + version = "0.3.5"; + sha256 = "0b67rjz80n58grz7hcb1lvk15lmww41967kv7f85vlpacfykng49"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -194908,6 +195552,8 @@ self: { pname = "parallel-tree-search"; version = "0.4.2"; sha256 = "08r8xl3x5zvsy3d3ss9m9l7kb0dyp7hjrwxlnz7g2jl7p5x8rjbd"; + revision = "1"; + editedCabalFile = "1d1wm16ydyyd1izm5mvrrxlqix8k98zvmfl418dsj446mfa2ih76"; libraryHaskellDepends = [ base parallel tree-monad ]; description = "Parallel Tree Search"; license = lib.licenses.publicDomain; @@ -195736,6 +196382,58 @@ self: { license = lib.licenses.bsd3; }) {}; + "parsley" = callPackage + ({ mkDerivation, base, parsley-core, template-haskell, text }: + mkDerivation { + pname = "parsley"; + version = "1.0.0.0"; + sha256 = "08g89wgynvr58xypcpvd552v7h16cb1rbfggiyr8dj49bmgm0hwx"; + libraryHaskellDepends = [ + base parsley-core template-haskell text + ]; + description = "A fast parser combinator library backed by Typed Template Haskell"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + + "parsley-core" = callPackage + ({ mkDerivation, array, base, bytestring, containers, cpphs + , dependent-map, dependent-sum, ghc-prim, hashable, mtl + , pretty-terminal, template-haskell, text, unordered-containers + }: + mkDerivation { + pname = "parsley-core"; + version = "1.0.0.0"; + sha256 = "0vcvxnmnml5jsjicx6rhskkb30ggz95wjlfcj1fzxc9si9vlkh4j"; + libraryHaskellDepends = [ + array base bytestring containers dependent-map dependent-sum + ghc-prim hashable mtl pretty-terminal template-haskell text + unordered-containers + ]; + libraryToolDepends = [ cpphs ]; + description = "A fast parser combinator library backed by Typed Template Haskell"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + + "parsley-garnish" = callPackage + ({ mkDerivation, base, ghc, ghc-tcplugins-extra, parsley-core, syb + , template-haskell + }: + mkDerivation { + pname = "parsley-garnish"; + version = "1.0.0.0"; + sha256 = "1vxl3ibxa923q4vxhvgxhf41p6c9ynmr18mmr7yrjrnc7arn615f"; + libraryHaskellDepends = [ + base ghc ghc-tcplugins-extra parsley-core syb template-haskell + ]; + description = "A collection of GHC plugins to work with parsley"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "parsnip" = callPackage ({ mkDerivation, attoparsec, base, bytestring, containers , data-default, ghc-prim, primitive @@ -195857,8 +196555,8 @@ self: { ({ mkDerivation, base, doctest, hedgehog }: mkDerivation { pname = "partial-semigroup"; - version = "0.5.1.8"; - sha256 = "1lxvgz0z04fkd67lnva902j8y5qxp6naga7gfnnazwafsb0s9kww"; + version = "0.5.1.12"; + sha256 = "0dkbw136cgqqhgckcn7wj39gd8ng8jmbdbq99qan5l2h5090k30h"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base doctest hedgehog ]; description = "A partial binary associative operator"; @@ -195869,8 +196567,8 @@ self: { ({ mkDerivation, base, hedgehog, partial-semigroup }: mkDerivation { pname = "partial-semigroup-hedgehog"; - version = "0.6.0.6"; - sha256 = "0n0j8xlrz66mzkvrsa083b9057n3rgbir7pwqxqycwzgj18g68s6"; + version = "0.6.0.8"; + sha256 = "0gldqqrfc87x1ff33qgan3pp62siqgal3imkf81b9rynws0saxh7"; libraryHaskellDepends = [ base hedgehog partial-semigroup ]; description = "Property testing for partial semigroups using Hedgehog"; license = lib.licenses.asl20; @@ -196271,8 +196969,10 @@ self: { }: mkDerivation { pname = "path"; - version = "0.7.1"; - sha256 = "1z2gj4108827lb03f7cdqhijjgqjvv9glzrzfv96cxkwgi6y38jx"; + version = "0.8.0"; + sha256 = "0vzsa41q5sxs1ni72yv1vfpnc6r5mjdwnmdb6jrs6cszb2xlkjr4"; + revision = "1"; + editedCabalFile = "02vhx94mqapyigvayb6cj7p7snn354pb542n3qyvsm0gih52wlja"; libraryHaskellDepends = [ aeson base deepseq exceptions filepath hashable template-haskell text @@ -196285,7 +196985,7 @@ self: { license = lib.licenses.bsd3; }) {}; - "path_0_8_0" = callPackage + "path_0_9_0" = callPackage ({ mkDerivation, aeson, base, bytestring, deepseq, exceptions , filepath, genvalidity, genvalidity-hspec, genvalidity-property , hashable, hspec, mtl, QuickCheck, template-haskell, text @@ -196293,10 +196993,8 @@ self: { }: mkDerivation { pname = "path"; - version = "0.8.0"; - sha256 = "0vzsa41q5sxs1ni72yv1vfpnc6r5mjdwnmdb6jrs6cszb2xlkjr4"; - revision = "1"; - editedCabalFile = "02vhx94mqapyigvayb6cj7p7snn354pb542n3qyvsm0gih52wlja"; + version = "0.9.0"; + sha256 = "14h811rrydpiwi1rdi5wmcdlcq2qjld3iv92p4czqf08a7lxaz4g"; libraryHaskellDepends = [ aeson base deepseq exceptions filepath hashable template-haskell text @@ -196366,8 +197064,10 @@ self: { }: mkDerivation { pname = "path-io"; - version = "1.6.2"; - sha256 = "11mrs0awd343far3rmcphdli65g737haxg7fwx3pl04fgdxfbpdq"; + version = "1.6.3"; + sha256 = "1dnc48hf8x83p0jy05qi8j8gmfmsy50swnql9ssdv74lsryp615n"; + revision = "1"; + editedCabalFile = "0hzpwyxyj332mq09vgf06vfsga9b0q711fr52x3xswcmhvvsv60g"; libraryHaskellDepends = [ base containers directory dlist exceptions filepath path temporary time transformers unix-compat @@ -196410,8 +197110,8 @@ self: { ({ mkDerivation, base, bytestring, path, safe-exceptions, text }: mkDerivation { pname = "path-text-utf8"; - version = "0.0.1.6"; - sha256 = "0zlmmfjzjgnhscy8852gi67hq8xl9j05c53faf599cqa6c71ry11"; + version = "0.0.1.8"; + sha256 = "1xi60cw75qzhb03z2a66xfxgr17xz39bdk7wmjc7yprqy0v016jj"; libraryHaskellDepends = [ base bytestring path safe-exceptions text ]; @@ -197042,8 +197742,8 @@ self: { }: mkDerivation { pname = "pcre2"; - version = "1.1.4"; - sha256 = "0wrw2slmkxxmw3zx85f9xv8374fsvhxsyf1l149fvkaqnvf19bs2"; + version = "1.1.5"; + sha256 = "0kwlcv2rh8hyx93i3q3xv8ijxccl02n5nbkv4g74dr12d41ggc1h"; libraryHaskellDepends = [ base containers mtl template-haskell text ]; @@ -197727,8 +198427,8 @@ self: { ({ mkDerivation, base, leancheck }: mkDerivation { pname = "percent-format"; - version = "0.0.1"; - sha256 = "028c8rnv86mln9pdhb6w4i56n07hlslg69f3pmcjpb7ilr5scc3m"; + version = "0.0.2"; + sha256 = "0nlfva8ldvq169q76ng2f23bdnyzc6q8a7bq4lgwr9ypw96i503f"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base leancheck ]; description = "simple printf-style string formatting"; @@ -197749,21 +198449,20 @@ self: { }) {}; "perceptual-hash" = callPackage - ({ mkDerivation, base, containers, cpphs, criterion, deepseq - , filepath, hip, hspec, optparse-applicative, par-traverse - , primitive, stm, vector, vector-algorithms + ({ mkDerivation, base, bytestring, containers, cpphs, criterion + , deepseq, filepath, hip, hspec, JuicyPixels, optparse-applicative + , par-traverse, primitive, stm, vector, vector-algorithms, webp }: mkDerivation { pname = "perceptual-hash"; - version = "0.1.3.5"; - sha256 = "0f36sy9ixwbx55m3634lr0hrhllj68wv5jilzq0xik2171g3rx2p"; - revision = "1"; - editedCabalFile = "0s67w3sc480vrmdjr67y6gjyhfik6v2lrh99abcgj6ikgiwx2lbf"; + version = "0.1.4.2"; + sha256 = "08zb8060ixk67jhr9h74zix9m1svpigz5l4ii97qi88l1xdxfx36"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; libraryHaskellDepends = [ - base hip primitive vector vector-algorithms + base bytestring hip JuicyPixels primitive vector vector-algorithms + webp ]; executableHaskellDepends = [ base containers filepath optparse-applicative par-traverse stm @@ -198268,47 +198967,18 @@ self: { }) {}; "persistent" = callPackage - ({ mkDerivation, aeson, attoparsec, base, base64-bytestring - , blaze-html, bytestring, conduit, containers, fast-logger, hspec - , http-api-data, monad-logger, mtl, path-pieces, resource-pool - , resourcet, scientific, shakespeare, silently, text, time - , transformers, unliftio, unliftio-core, unordered-containers - , vector - }: - mkDerivation { - pname = "persistent"; - version = "2.11.0.4"; - sha256 = "1n5wkhfvyqq6p57nkf9yx73kap6spyzam5w12ni8pmd1m6pk77xn"; - libraryHaskellDepends = [ - aeson attoparsec base base64-bytestring blaze-html bytestring - conduit containers fast-logger http-api-data monad-logger mtl - path-pieces resource-pool resourcet scientific silently text time - transformers unliftio unliftio-core unordered-containers vector - ]; - testHaskellDepends = [ - aeson attoparsec base base64-bytestring blaze-html bytestring - containers hspec http-api-data path-pieces scientific shakespeare - text time transformers unordered-containers vector - ]; - description = "Type-safe, multi-backend data serialization"; - license = lib.licenses.mit; - maintainers = with lib.maintainers; [ psibi ]; - }) {}; - - "persistent_2_13_0_1" = callPackage ({ mkDerivation, aeson, attoparsec, base, base64-bytestring , blaze-html, bytestring, conduit, containers, criterion, deepseq - , deepseq-generics, fast-logger, file-embed, hspec, http-api-data - , lift-type, monad-logger, mtl, path-pieces, QuickCheck - , quickcheck-instances, resource-pool, resourcet, scientific - , shakespeare, silently, template-haskell, text, th-lift-instances - , time, transformers, unliftio, unliftio-core, unordered-containers - , vector + , fast-logger, file-embed, hspec, http-api-data, lift-type + , monad-logger, mtl, path-pieces, QuickCheck, quickcheck-instances + , resource-pool, resourcet, scientific, shakespeare, silently + , template-haskell, text, th-lift-instances, time, transformers + , unliftio, unliftio-core, unordered-containers, vector }: mkDerivation { pname = "persistent"; - version = "2.13.0.1"; - sha256 = "0yvipx9y33pr1vz7818w2ylr5zf9bmng8ka70mdb4f563l4ynp96"; + version = "2.13.0.2"; + sha256 = "1fn3hjn3pxxnawvdif691vmxahnmal5ivr5rll0f26ia7rjqrnn2"; libraryHaskellDepends = [ aeson attoparsec base base64-bytestring blaze-html bytestring conduit containers fast-logger http-api-data lift-type monad-logger @@ -198325,8 +198995,43 @@ self: { unordered-containers vector ]; benchmarkHaskellDepends = [ - base criterion deepseq deepseq-generics file-embed template-haskell - text + base criterion deepseq file-embed template-haskell text + ]; + description = "Type-safe, multi-backend data serialization"; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ psibi ]; + }) {}; + + "persistent_2_13_0_3" = callPackage + ({ mkDerivation, aeson, attoparsec, base, base64-bytestring + , blaze-html, bytestring, conduit, containers, criterion, deepseq + , fast-logger, file-embed, hspec, http-api-data, lift-type + , monad-logger, mtl, path-pieces, QuickCheck, quickcheck-instances + , resource-pool, resourcet, scientific, shakespeare, silently + , template-haskell, text, th-lift-instances, time, transformers + , unliftio, unliftio-core, unordered-containers, vector + }: + mkDerivation { + pname = "persistent"; + version = "2.13.0.3"; + sha256 = "0jlrkyy10cz6rq47r75q9l5ycyrdjwxs810x7v5ijrimdd9cv24d"; + libraryHaskellDepends = [ + aeson attoparsec base base64-bytestring blaze-html bytestring + conduit containers fast-logger http-api-data lift-type monad-logger + mtl path-pieces resource-pool resourcet scientific silently + template-haskell text th-lift-instances time transformers unliftio + unliftio-core unordered-containers vector + ]; + testHaskellDepends = [ + aeson attoparsec base base64-bytestring blaze-html bytestring + conduit containers fast-logger hspec http-api-data monad-logger mtl + path-pieces QuickCheck quickcheck-instances resource-pool resourcet + scientific shakespeare silently template-haskell text + th-lift-instances time transformers unliftio unliftio-core + unordered-containers vector + ]; + benchmarkHaskellDepends = [ + base criterion deepseq file-embed template-haskell text ]; description = "Type-safe, multi-backend data serialization"; license = lib.licenses.mit; @@ -198435,6 +199140,8 @@ self: { pname = "persistent-documentation"; version = "0.1.0.2"; sha256 = "0ys864vjzl97c9qv0gg5q9zviammrfvm0schvh7ckr9pdg062z17"; + revision = "1"; + editedCabalFile = "0pzgmwqjyzpql7d6bk9xkzkjvm21giq7f420y4fqq4wli3g2cwmx"; libraryHaskellDepends = [ base containers mtl persistent template-haskell text ]; @@ -198445,6 +199152,8 @@ self: { testToolDepends = [ hspec-discover ]; description = "Documentation DSL for persistent entities"; license = lib.licenses.asl20; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "persistent-equivalence" = callPackage @@ -198567,10 +199276,8 @@ self: { }: mkDerivation { pname = "persistent-mongoDB"; - version = "2.12.0.0"; - sha256 = "1s49d4c4kiqcblkap96wcrp3nc0179vpzbqp4fdibljq9ylzxmzg"; - revision = "1"; - editedCabalFile = "047riy3grn68jw99095qgqxvfs5bvxmcvmnz170nrqflrlr4l4dd"; + version = "2.13.0.0"; + sha256 = "0096fjyzgl788ciws0vb5bn5in8946bd12qrg8wz8dyq1xvilg8m"; libraryHaskellDepends = [ aeson base bson bytestring cereal conduit http-api-data mongoDB network path-pieces persistent resource-pool resourcet text time @@ -198596,8 +199303,8 @@ self: { }: mkDerivation { pname = "persistent-mtl"; - version = "0.2.1.0"; - sha256 = "1lwzkxb55bb4ldcwxkkfjfly39bnjjdg01yihl6znx8y3c461yrx"; + version = "0.2.2.0"; + sha256 = "0z78xs1gi45i3a9q28yr7jpsdsbzfqjahch3m27gygkja9dgm438"; libraryHaskellDepends = [ base conduit containers mtl persistent resource-pool resourcet text transformers unliftio unliftio-core unliftio-pool @@ -198613,34 +199320,6 @@ self: { }) {}; "persistent-mysql" = callPackage - ({ mkDerivation, aeson, base, blaze-builder, bytestring, conduit - , containers, fast-logger, hspec, HUnit, monad-logger, mysql - , mysql-simple, persistent, persistent-qq, persistent-template - , persistent-test, QuickCheck, quickcheck-instances, resource-pool - , resourcet, text, time, transformers, unliftio-core - }: - mkDerivation { - pname = "persistent-mysql"; - version = "2.10.3.1"; - sha256 = "00gs2ym5vw2cqahv48cx8fhi3kx06rn0s1pafm8pdlr98snvwif7"; - revision = "1"; - editedCabalFile = "1nd3l499kpv2rfhqqjw1b3qsn558rwz3794cy2x493l98rsspszp"; - libraryHaskellDepends = [ - aeson base blaze-builder bytestring conduit containers monad-logger - mysql mysql-simple persistent resource-pool resourcet text - transformers unliftio-core - ]; - testHaskellDepends = [ - base bytestring containers fast-logger hspec HUnit monad-logger - mysql persistent persistent-qq persistent-template persistent-test - QuickCheck quickcheck-instances resourcet text time transformers - unliftio-core - ]; - description = "Backend for the persistent library using MySQL database server"; - license = lib.licenses.mit; - }) {}; - - "persistent-mysql_2_13_0_0" = callPackage ({ mkDerivation, aeson, base, blaze-builder, bytestring, conduit , containers, fast-logger, hspec, http-api-data, HUnit , monad-logger, mysql, mysql-simple, path-pieces, persistent @@ -198649,8 +199328,8 @@ self: { }: mkDerivation { pname = "persistent-mysql"; - version = "2.13.0.0"; - sha256 = "1lqd1j9r973081yzvvz9c65csqjd8bzapb4dayzwbhwjq2p0sxiz"; + version = "2.13.0.1"; + sha256 = "1gl48xcsczpzipg9v107x970rzi66vr26772ml9z8szxygamgsdb"; libraryHaskellDepends = [ aeson base blaze-builder bytestring conduit containers monad-logger mysql mysql-simple persistent resource-pool resourcet text @@ -198664,7 +199343,6 @@ self: { ]; description = "Backend for the persistent library using MySQL database server"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "persistent-mysql-haskell" = callPackage @@ -198759,16 +199437,19 @@ self: { "persistent-postgresql" = callPackage ({ mkDerivation, aeson, attoparsec, base, blaze-builder, bytestring , conduit, containers, fast-logger, hspec, hspec-expectations - , HUnit, monad-logger, mtl, persistent, persistent-qq - , persistent-template, persistent-test, postgresql-libpq - , postgresql-simple, QuickCheck, quickcheck-instances - , resource-pool, resourcet, string-conversions, text, time - , transformers, unliftio-core, unordered-containers, vector + , hspec-expectations-lifted, http-api-data, HUnit, monad-logger + , mtl, path-pieces, persistent, persistent-qq, persistent-test + , postgresql-libpq, postgresql-simple, QuickCheck + , quickcheck-instances, resource-pool, resourcet + , string-conversions, text, time, transformers, unliftio + , unliftio-core, unordered-containers, vector }: mkDerivation { pname = "persistent-postgresql"; - version = "2.11.0.1"; - sha256 = "08bmf52fqjwzyw4dnvh2ql4q3ai05fzzicgd5z6bim13b9s4ggmk"; + version = "2.13.0.2"; + sha256 = "1cbrwzk2s3xrdxpas64slk1habn38xspdg09xj2yazszkmr31hrh"; + isLibrary = true; + isExecutable = true; libraryHaskellDepends = [ aeson attoparsec base blaze-builder bytestring conduit containers monad-logger mtl persistent postgresql-libpq postgresql-simple @@ -198777,16 +199458,16 @@ self: { ]; testHaskellDepends = [ aeson base bytestring containers fast-logger hspec - hspec-expectations HUnit monad-logger persistent persistent-qq - persistent-template persistent-test QuickCheck quickcheck-instances - resourcet text time transformers unliftio-core unordered-containers - vector + hspec-expectations hspec-expectations-lifted http-api-data HUnit + monad-logger path-pieces persistent persistent-qq persistent-test + QuickCheck quickcheck-instances resourcet text time transformers + unliftio unliftio-core unordered-containers vector ]; description = "Backend for the persistent library using postgresql"; license = lib.licenses.mit; }) {}; - "persistent-postgresql_2_13_0_0" = callPackage + "persistent-postgresql_2_13_0_3" = callPackage ({ mkDerivation, aeson, attoparsec, base, blaze-builder, bytestring , conduit, containers, fast-logger, hspec, hspec-expectations , hspec-expectations-lifted, http-api-data, HUnit, monad-logger @@ -198798,8 +199479,8 @@ self: { }: mkDerivation { pname = "persistent-postgresql"; - version = "2.13.0.0"; - sha256 = "0a18h7ib01if2dspq8f3vwb02cwi74c12i0n3ax4aq6819qy12gb"; + version = "2.13.0.3"; + sha256 = "06f5yyv8bj3m4zpjwr1k66hkmh1gfy624rnq2g12sjrpz8nrax6j"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -198839,36 +199520,14 @@ self: { }) {}; "persistent-qq" = callPackage - ({ mkDerivation, aeson, base, bytestring, fast-logger - , haskell-src-meta, hspec, HUnit, monad-logger, mtl, persistent - , persistent-sqlite, persistent-template, resourcet - , template-haskell, text, unliftio - }: - mkDerivation { - pname = "persistent-qq"; - version = "2.9.2.1"; - sha256 = "0gnwkrjyh9fkli35qp0mvivbsycz58ng26z6rfqv377hgrjsvjiq"; - libraryHaskellDepends = [ - base haskell-src-meta mtl persistent template-haskell text - ]; - testHaskellDepends = [ - aeson base bytestring fast-logger haskell-src-meta hspec HUnit - monad-logger mtl persistent persistent-sqlite persistent-template - resourcet template-haskell text unliftio - ]; - description = "Provides a quasi-quoter for raw SQL for persistent"; - license = lib.licenses.mit; - }) {}; - - "persistent-qq_2_12_0_0" = callPackage ({ mkDerivation, aeson, base, bytestring, fast-logger , haskell-src-meta, hspec, HUnit, monad-logger, mtl, persistent , persistent-sqlite, resourcet, template-haskell, text, unliftio }: mkDerivation { pname = "persistent-qq"; - version = "2.12.0.0"; - sha256 = "1mw565rwnzdsw0vc0gs31z4l4pw8qxb70l898invj7dfnq5vj62f"; + version = "2.12.0.1"; + sha256 = "1dvniapxjaw2vmdqd5cplwxdxiy2l6z6gns8gp3ci3rn3xp0pf6p"; libraryHaskellDepends = [ base haskell-src-meta mtl persistent template-haskell text ]; @@ -198879,7 +199538,6 @@ self: { ]; description = "Provides a quasi-quoter for raw SQL for persistent"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "persistent-ratelimit" = callPackage @@ -198978,38 +199636,6 @@ self: { }) {}; "persistent-sqlite" = callPackage - ({ mkDerivation, aeson, base, bytestring, conduit, containers - , exceptions, fast-logger, hspec, HUnit, microlens, microlens-th - , monad-logger, mtl, persistent, persistent-template - , persistent-test, QuickCheck, resource-pool, resourcet, sqlite - , system-fileio, system-filepath, temporary, text, time - , transformers, unliftio-core, unordered-containers - }: - mkDerivation { - pname = "persistent-sqlite"; - version = "2.11.1.0"; - sha256 = "04rdzcckdkvs8nisx0hh96sdfyly82yr8c0mx6nsxpyi7m52by9j"; - configureFlags = [ "-fsystemlib" ]; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - aeson base bytestring conduit containers microlens-th monad-logger - mtl persistent resource-pool resourcet text time transformers - unliftio-core unordered-containers - ]; - librarySystemDepends = [ sqlite ]; - testHaskellDepends = [ - base bytestring conduit containers exceptions fast-logger hspec - HUnit microlens monad-logger mtl persistent persistent-template - persistent-test QuickCheck resourcet system-fileio system-filepath - temporary text time transformers unliftio-core - ]; - description = "Backend for the persistent library using sqlite3"; - license = lib.licenses.mit; - maintainers = with lib.maintainers; [ psibi ]; - }) {inherit (pkgs) sqlite;}; - - "persistent-sqlite_2_13_0_0" = callPackage ({ mkDerivation, aeson, base, bytestring, conduit, containers , exceptions, fast-logger, hspec, HUnit, microlens, microlens-th , monad-logger, mtl, persistent, persistent-test, QuickCheck @@ -199019,10 +199645,8 @@ self: { }: mkDerivation { pname = "persistent-sqlite"; - version = "2.13.0.0"; - sha256 = "1xbf22cnvhjs59wqml0n5flk1fhrhjw3flm3lnhh1nik3scfny0w"; - revision = "1"; - editedCabalFile = "0y21azb1cvaxwlypprh3wqxr0w0hchf3r509vqxvywqymckqc71i"; + version = "2.13.0.3"; + sha256 = "12za89crbk74mya4qxpw5fp5fqp64vwz5s8vbjd7m8r3j3vbw338"; configureFlags = [ "-fsystemlib" ]; isLibrary = true; isExecutable = true; @@ -199040,41 +199664,10 @@ self: { ]; description = "Backend for the persistent library using sqlite3"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; maintainers = with lib.maintainers; [ psibi ]; }) {inherit (pkgs) sqlite;}; "persistent-template" = callPackage - ({ mkDerivation, aeson, base, bytestring, containers, criterion - , deepseq, deepseq-generics, file-embed, hspec, http-api-data - , monad-control, monad-logger, path-pieces, persistent, QuickCheck - , template-haskell, text, th-lift-instances, transformers - , unordered-containers - }: - mkDerivation { - pname = "persistent-template"; - version = "2.9.1.0"; - sha256 = "19ilgz8r6p5wy111rb4v0d6cnrj8jfiv2pnzdynpxd9ay66vgbca"; - revision = "2"; - editedCabalFile = "1lyrnh2lskkbvpjhbjiyh2ibndldsr8zgaiws7n37pa3vnmfx0qw"; - libraryHaskellDepends = [ - aeson base bytestring containers http-api-data monad-control - monad-logger path-pieces persistent template-haskell text - th-lift-instances transformers unordered-containers - ]; - testHaskellDepends = [ - aeson base bytestring hspec persistent QuickCheck text - ]; - benchmarkHaskellDepends = [ - base criterion deepseq deepseq-generics file-embed persistent - template-haskell text - ]; - description = "Type-safe, non-relational, multi-backend persistence"; - license = lib.licenses.mit; - maintainers = with lib.maintainers; [ psibi ]; - }) {}; - - "persistent-template_2_12_0_0" = callPackage ({ mkDerivation, base }: mkDerivation { pname = "persistent-template"; @@ -199084,7 +199677,6 @@ self: { doHaddock = false; description = "Type-safe, non-relational, multi-backend persistence"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; maintainers = with lib.maintainers; [ psibi ]; }) {}; @@ -199094,8 +199686,8 @@ self: { }: mkDerivation { pname = "persistent-template-classy"; - version = "0.1.0.1"; - sha256 = "0ph5cfm5gj6qydv70s9bmb5ynymqnrhqiwcqpd0s87xj2iv9v46a"; + version = "0.2.0"; + sha256 = "0grfr7bb0c9m4fhg27g4qch43mgjqfrzw2c0gi0arq5ibm3n17kk"; libraryHaskellDepends = [ base lens persistent persistent-sqlite persistent-template template-haskell text @@ -199111,29 +199703,6 @@ self: { }) {}; "persistent-test" = callPackage - ({ mkDerivation, aeson, base, blaze-html, bytestring, conduit - , containers, exceptions, hspec, hspec-expectations, HUnit - , monad-control, monad-logger, mtl, path-pieces, persistent - , persistent-template, QuickCheck, quickcheck-instances, random - , resourcet, text, time, transformers, transformers-base, unliftio - , unliftio-core, unordered-containers - }: - mkDerivation { - pname = "persistent-test"; - version = "2.0.3.5"; - sha256 = "16m3nlmpwxibfhgrfl3xqh3a518bkrd7qaa8hklfq2qwlvjbb31v"; - libraryHaskellDepends = [ - aeson base blaze-html bytestring conduit containers exceptions - hspec hspec-expectations HUnit monad-control monad-logger mtl - path-pieces persistent persistent-template QuickCheck - quickcheck-instances random resourcet text time transformers - transformers-base unliftio unliftio-core unordered-containers - ]; - description = "Tests for Persistent"; - license = lib.licenses.mit; - }) {}; - - "persistent-test_2_13_0_0" = callPackage ({ mkDerivation, aeson, base, blaze-html, bytestring, conduit , containers, exceptions, hspec, hspec-expectations, http-api-data , HUnit, monad-control, monad-logger, mtl, path-pieces, persistent @@ -199143,10 +199712,8 @@ self: { }: mkDerivation { pname = "persistent-test"; - version = "2.13.0.0"; - sha256 = "1fyahnnx9f3dg36kqviah5l9410d0x819dz3afxapcq27myccdw7"; - revision = "1"; - editedCabalFile = "16yzpsy11bcglipgcy0x8mcxlx7w00gfvnw5fhjkbj99lxdwwgm0"; + version = "2.13.0.3"; + sha256 = "07q53jvhz00cf10k7a8fkvykgwcl10fgzh8k9gv1d248f336crvs"; libraryHaskellDepends = [ aeson base blaze-html bytestring conduit containers exceptions hspec hspec-expectations http-api-data HUnit monad-control @@ -199156,43 +199723,18 @@ self: { ]; description = "Tests for Persistent"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "persistent-typed-db" = callPackage ({ mkDerivation, aeson, base, bytestring, conduit, esqueleto, hspec - , http-api-data, monad-logger, path-pieces, persistent - , persistent-template, resource-pool, resourcet, template-haskell - , text, transformers + , hspec-discover, http-api-data, monad-logger, path-pieces + , persistent, resource-pool, resourcet, template-haskell, text + , transformers }: mkDerivation { pname = "persistent-typed-db"; - version = "0.1.0.2"; - sha256 = "1pdhdb29b7gyaw3kh1vr76dyr7gvwpx9ymib17fzfsxks6s76dxc"; - libraryHaskellDepends = [ - aeson base bytestring conduit http-api-data monad-logger - path-pieces persistent persistent-template resource-pool resourcet - template-haskell text transformers - ]; - testHaskellDepends = [ - aeson base bytestring conduit esqueleto hspec http-api-data - monad-logger path-pieces persistent persistent-template - resource-pool resourcet template-haskell text transformers - ]; - description = "Type safe access to multiple database schemata"; - license = lib.licenses.bsd3; - }) {}; - - "persistent-typed-db_0_1_0_3" = callPackage - ({ mkDerivation, aeson, base, bytestring, conduit, esqueleto, hspec - , http-api-data, monad-logger, path-pieces, persistent - , persistent-template, resource-pool, resourcet, template-haskell - , text, transformers - }: - mkDerivation { - pname = "persistent-typed-db"; - version = "0.1.0.3"; - sha256 = "15x4qfk4bwafqa495y8dsywa5mrcfnmqm7pyn419p20yngnyhzn8"; + version = "0.1.0.4"; + sha256 = "1dd5kig6zkiq5qkqv63icz9z8mn0b56b06w6z980hi7a2bmp6pk8"; libraryHaskellDepends = [ aeson base bytestring conduit http-api-data monad-logger path-pieces persistent resource-pool resourcet template-haskell @@ -199200,12 +199742,12 @@ self: { ]; testHaskellDepends = [ aeson base bytestring conduit esqueleto hspec http-api-data - monad-logger path-pieces persistent persistent-template - resource-pool resourcet template-haskell text transformers + monad-logger path-pieces persistent resource-pool resourcet + template-haskell text transformers ]; + testToolDepends = [ hspec-discover ]; description = "Type safe access to multiple database schemata"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "persistent-vector" = callPackage @@ -199518,6 +200060,7 @@ self: { description = "A postgresql-simple transaction monad"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "pgdl" = callPackage @@ -199953,8 +200496,8 @@ self: { }: mkDerivation { pname = "phonetic-languages-phonetics-basics"; - version = "0.6.2.0"; - sha256 = "1vzx21pp9hkksbw5vpl8rarxpnbhmj04xys3qx0xk0zqf2p1f86q"; + version = "0.7.0.0"; + sha256 = "16a8b5xpdrayfh03czs0nb1xz6kn95rr4k4dim5viqjxpc9f0zbn"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -200059,8 +200602,8 @@ self: { }: mkDerivation { pname = "phonetic-languages-simplified-examples-array"; - version = "0.4.1.0"; - sha256 = "02z7c3ngcj4dz473j0ha05qh5wviiy4qp1mk3p4gidxrhkgbxhyc"; + version = "0.4.2.0"; + sha256 = "02lv4w9v8jf7v6dkrwwmy79h7yphmk37n54r9whii6kicns80ff2"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -200120,8 +200663,8 @@ self: { }: mkDerivation { pname = "phonetic-languages-simplified-generalized-examples-array"; - version = "0.1.1.0"; - sha256 = "04b65k6jjrlfx93m7625f991vll136y0lbh82f9qgxlmwv1vwmm8"; + version = "0.3.0.0"; + sha256 = "15k2nij8rpf1yvm5kjgkrvx1y4zlfskxfdxjbjirmaidamr2ha6d"; libraryHaskellDepends = [ base heaps mmsyn2-array parallel phonetic-languages-constraints-array @@ -200142,8 +200685,8 @@ self: { }: mkDerivation { pname = "phonetic-languages-simplified-generalized-examples-common"; - version = "0.1.1.0"; - sha256 = "0yhpw7bpfag5d6cbm385dy5jxll2vn8104ypqngdv0qlxqx25m9l"; + version = "0.2.0.0"; + sha256 = "15ngw29ffsyp7j71rpyllfyifvqybgpb5mh2cfgi1vscl8c6zydl"; libraryHaskellDepends = [ base heaps phonetic-languages-phonetics-basics subG ]; @@ -200158,13 +200701,13 @@ self: { }: mkDerivation { pname = "phonetic-languages-simplified-generalized-properties-array"; - version = "0.1.1.0"; - sha256 = "04jg2b2qzm3yhbckbpn7zarfdy921lryx8d5r3cx9vcp55xvain0"; + version = "0.2.0.0"; + sha256 = "1k1id4dz0siz3qqax738k4k2dfj68slph4yy8ad6f4r9fink9jqr"; libraryHaskellDepends = [ base phonetic-languages-phonetics-basics phonetic-languages-rhythmicity phonetic-languages-simplified-base ]; - description = "Generalization of the functionality of the phonetic-languages-simplified-properties-array"; + description = "Some 'properties' of the phonetic languages approach text"; license = lib.licenses.mit; }) {}; @@ -200839,8 +201382,8 @@ self: { }: mkDerivation { pname = "pinch-gen"; - version = "0.4.1.0"; - sha256 = "11sk0lmzsxw0k8i8airpv7p461z25n6y2fygx0l7gv0zadaici2v"; + version = "0.4.2.0"; + sha256 = "0saacr8q2varfqcq386dk9k04caijm90yi106wyl88pn3f5piaq3"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -203045,8 +203588,8 @@ self: { }: mkDerivation { pname = "ploterific"; - version = "0.2.0.0"; - sha256 = "1x49b7js161bhdr8v631qr1r4cjnxg9kdvnlc55b5g5kajwf714w"; + version = "0.2.1.2"; + sha256 = "1ywg09amxngan23c5724c5s2s79yhynqha6c5xivg1ls58nc7yk5"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -204003,6 +204546,8 @@ self: { ]; description = "Higher-order, low-boilerplate free monads"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "polysemy-RandomFu" = callPackage @@ -204012,8 +204557,8 @@ self: { }: mkDerivation { pname = "polysemy-RandomFu"; - version = "0.4.2.0"; - sha256 = "0rsmdp7p0asmaf13wf5ky0ngrmnqdfbi67y4a0vcwqvknqmlys2y"; + version = "0.4.2.1"; + sha256 = "16r167cx87y9l36psa3ffrcfjyhm4ngzbbsmm9c5dh3gvq53vw58"; libraryHaskellDepends = [ base polysemy polysemy-plugin polysemy-zoo random-fu random-source ]; @@ -204034,8 +204579,8 @@ self: { }: mkDerivation { pname = "polysemy-chronos"; - version = "0.1.2.1"; - sha256 = "0b33an8swx97fg6196vvs0zic3zkhigxy6zi2r6pbrw9v8fgwkqa"; + version = "0.1.2.2"; + sha256 = "15vi5x099r38jk3lnynpi8my4fp06fkzwvrxgpvxdfp9ilg2al6h"; libraryHaskellDepends = [ aeson base chronos containers polysemy polysemy-plugin polysemy-time relude text @@ -204046,6 +204591,7 @@ self: { ]; description = "Polysemy effect for chronos"; license = "BSD-2-Clause-Patent"; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-conc" = callPackage @@ -204069,6 +204615,7 @@ self: { ]; description = "Polysemy Effects for Concurrency"; license = "BSD-2-Clause-Patent"; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-extra" = callPackage @@ -204100,6 +204647,7 @@ self: { ]; description = "Low level filesystem operations for polysemy"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-fskvstore" = callPackage @@ -204145,6 +204693,7 @@ self: { ]; description = "Polysemy effect for http-client"; license = "BSD-2-Clause-Patent"; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-kvstore-jsonfile" = callPackage @@ -204185,6 +204734,7 @@ self: { ]; description = "Polysemy effects for logging"; license = "BSD-2-Clause-Patent"; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-log-co" = callPackage @@ -204229,6 +204779,7 @@ self: { ]; description = "polysemy-log interpreter for di"; license = "BSD-2-Clause-Patent"; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-methodology" = callPackage @@ -204277,14 +204828,15 @@ self: { testToolDepends = [ hspec-discover ]; description = "Mocking framework for polysemy effects"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-optics" = callPackage ({ mkDerivation, base, optics, polysemy, polysemy-zoo }: mkDerivation { pname = "polysemy-optics"; - version = "0.1.0.0"; - sha256 = "1ym2da08wy5pbdijrvn769w644dyma8hc010f8phqjnpkhq4j0z5"; + version = "0.1.0.1"; + sha256 = "1503qfi0kp8p4h723nkwidgxp46wmfxi93vsyvdp6i7zwvg09yy2"; libraryHaskellDepends = [ base optics polysemy polysemy-zoo ]; description = "Optics for Polysemy"; license = lib.licenses.bsd2; @@ -204328,6 +204880,7 @@ self: { testToolDepends = [ hspec-discover ]; description = "Disambiguate obvious uses of effects"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-resume" = callPackage @@ -204345,6 +204898,7 @@ self: { ]; description = "Polysemy error tracking"; license = "BSD-2-Clause-Patent"; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-test" = callPackage @@ -204354,8 +204908,8 @@ self: { }: mkDerivation { pname = "polysemy-test"; - version = "0.3.1.2"; - sha256 = "1gzngz8mspq0n6hwhvqah8szjrhf65wigadrh3l863j2iswsxq2r"; + version = "0.3.1.3"; + sha256 = "0m6zczyw4shgrpfyz23m9n3626mxcfqj0sdfcrnlkz7n0k0k0470"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base containers either hedgehog path path-io polysemy @@ -204369,6 +204923,7 @@ self: { ]; description = "Polysemy effects for testing"; license = "BSD-2-Clause-Patent"; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-time" = callPackage @@ -204379,8 +204934,8 @@ self: { }: mkDerivation { pname = "polysemy-time"; - version = "0.1.2.1"; - sha256 = "16b0wj6f9pcxq5in53yh2p52pj1w358f412rpvyhz376ak7z6h71"; + version = "0.1.2.2"; + sha256 = "1q08dwyp4v28s31gfq2ha8irfhczxzhg9c96wps6iz5xl7cir9va"; libraryHaskellDepends = [ aeson base composition containers data-default either polysemy relude string-interpolate template-haskell text time torsor @@ -204392,6 +204947,7 @@ self: { ]; description = "Polysemy effect for time"; license = "BSD-2-Clause-Patent"; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-video" = callPackage @@ -204406,6 +204962,7 @@ self: { base formatting path path-utils polysemy text turtle ]; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-vinyl" = callPackage @@ -204439,6 +204996,7 @@ self: { ]; description = "Start web servers from within a Polysemy effect stack"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "polysemy-zoo" = callPackage @@ -205385,6 +205943,8 @@ self: { ]; description = "Sleep tracker for X11, using XScreenSaver extension and manual input"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "possible" = callPackage @@ -205808,19 +206368,19 @@ self: { , quickcheck-assertions, quickcheck-instances, resource-pool , semigroups, tasty, tasty-hunit, tasty-quickcheck, tasty-th , template-haskell, text, th-lift, th-lift-instances, time - , transformers, transformers-base, transformers-compat, type-fun + , transformers, transformers-base, transformers-compat }: mkDerivation { pname = "postgresql-query"; - version = "3.8.1"; - sha256 = "09lld8fibwn0brszpz040pr8q7b5wrpc9fzdw8pwf7gfsb02wvx1"; + version = "3.8.2"; + sha256 = "1vcfs5yg9ab0axdm661kjpsfxii7h3s8rrq38kgc68vhr280m110"; libraryHaskellDepends = [ aeson attoparsec base blaze-builder bytestring containers data-default exceptions file-embed haskell-src-meta hreader hset inflections monad-control monad-logger mtl postgresql-simple resource-pool semigroups template-haskell text th-lift th-lift-instances time transformers transformers-base - transformers-compat type-fun + transformers-compat ]; testHaskellDepends = [ attoparsec base generic-arbitrary postgresql-simple QuickCheck @@ -206565,6 +207125,30 @@ self: { license = lib.licenses.gpl2Only; }) {}; + "powerdns" = callPackage + ({ mkDerivation, aeson, base, base64-bytestring, bytestring + , case-insensitive, containers, deepseq, http-client, servant + , servant-client, servant-client-core, tasty, tasty-hunit, text + , time + }: + mkDerivation { + pname = "powerdns"; + version = "0.1"; + sha256 = "1fg698m3qmm5f0g0fl394hx593pwg7ai730imwahv00fr846lqm1"; + libraryHaskellDepends = [ + aeson base base64-bytestring bytestring case-insensitive containers + deepseq servant servant-client servant-client-core text time + ]; + testHaskellDepends = [ + base http-client servant-client servant-client-core tasty + tasty-hunit + ]; + description = "PowerDNS API bindings for api/v1"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "powermate" = callPackage ({ mkDerivation, base, directory, unix }: mkDerivation { @@ -208662,8 +209246,8 @@ self: { pname = "process"; version = "1.6.11.0"; sha256 = "0nv8c2hnx1l6xls6b61l8sm7j250qfbj1fjj5n6m15ppk9f0d9jd"; - revision = "1"; - editedCabalFile = "136mp45m1jh27yayb0gx4giybp6imh7hbr774fsb2m9vj2l52b27"; + revision = "2"; + editedCabalFile = "1yz98g78syad217c816q5rrdb7w93lpsp3pcc4djsy050w9ji56n"; libraryHaskellDepends = [ base deepseq directory filepath unix ]; testHaskellDepends = [ base bytestring directory ]; description = "Process libraries"; @@ -209094,8 +209678,8 @@ self: { }: mkDerivation { pname = "profiteur"; - version = "0.4.5.1"; - sha256 = "0mq2fal93v42rkgiq0xwqzqc413dgkiawa09bxgv0sgajzslqx80"; + version = "0.4.6.0"; + sha256 = "0jkrx34hymx70aqxjcnw2a7pdiw1hy4nc6m2larjrgxjczshpfqx"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -209183,24 +209767,6 @@ self: { }) {coapplicative = null;}; "profunctors" = callPackage - ({ mkDerivation, base, base-orphans, bifunctors, comonad - , contravariant, distributive, tagged, transformers - }: - mkDerivation { - pname = "profunctors"; - version = "5.5.2"; - sha256 = "0z5gk2ip4x2z0jad9lnsnq1q1i8bbgchw3bwgiy3gbmgp2m7j5az"; - revision = "1"; - editedCabalFile = "0b73nqyl3yc3q4r0asrciqx7q19y6ygfszb79kn37pndnzj4m0hd"; - libraryHaskellDepends = [ - base base-orphans bifunctors comonad contravariant distributive - tagged transformers - ]; - description = "Profunctors"; - license = lib.licenses.bsd3; - }) {}; - - "profunctors_5_6_2" = callPackage ({ mkDerivation, base, base-orphans, bifunctors, comonad , contravariant, distributive, tagged, transformers }: @@ -209214,7 +209780,6 @@ self: { ]; description = "Profunctors"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "progress" = callPackage @@ -210241,6 +210806,8 @@ self: { pname = "proto3-suite"; version = "0.4.2"; sha256 = "015cg6brf6v0h2h2d36hqqr9i69vr30bhc35av55v0d65ya0sczz"; + revision = "1"; + editedCabalFile = "1s9mr6y31kbm0f316i7q0w4qgmi0mas23dhbam6i9pshfa0bav0x"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -210516,8 +211083,8 @@ self: { }: mkDerivation { pname = "proton"; - version = "0.0.3"; - sha256 = "0w68v8sglyg99jni1p1cz6x87cm6x1ayll08wlijaiwpqc2pma2n"; + version = "0.0.4"; + sha256 = "1z8w3ymn893jgzanxp89x6kga9d79kggvcgkm9mhwd9q88h97v91"; libraryHaskellDepends = [ adjunctions async base bifunctors comonad compactable containers contravariant distributive folds linear mtl profunctors tagged @@ -210588,8 +211155,8 @@ self: { }: mkDerivation { pname = "provenience"; - version = "0.1.1.0"; - sha256 = "020kfw1laishiqy8npg2f2llq7dv1djii0d0khjfw7f1scy4x10n"; + version = "0.1.2.0"; + sha256 = "0irhlscjq3anfhzn2qs28w4k6z48p557a060iqpimjw2kjkyrr4d"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -210882,8 +211449,6 @@ self: { benchmarkHaskellDepends = [ gauge rerebase ]; description = "Pointer poking action construction and composition toolkit"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; - broken = true; }) {}; "ptrdiff" = callPackage @@ -210976,8 +211541,10 @@ self: { }: mkDerivation { pname = "publish"; - version = "2.1.6"; - sha256 = "1clb9sxrsskklzany9q5600v77qywdszgzxjxrvsihrirf0akry2"; + version = "2.2.2"; + sha256 = "19bvdldggklzq6wqgcbvnf4jjlbdbh1l80dm92aj0405a9rhsa28"; + revision = "2"; + editedCabalFile = "19ajwrsd1l9p4cm9ckii5i6nb5w28sxl7kr129xz8kwkpj4z6lfq"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -211458,18 +212025,17 @@ self: { , http-types, HUnit, language-javascript, lifted-async, lifted-base , memory, microlens, microlens-platform, monad-control , monad-logger, mtl, network, optparse-applicative, parallel - , parsec, pattern-arrows, process, protolude, purescript-ast - , purescript-cst, regex-base, regex-tdfa, safe, scientific - , semialign, semigroups, serialise, sourcemap, split, stm - , stringsearch, syb, tasty, tasty-golden, tasty-hspec - , tasty-quickcheck, text, these, time, transformers - , transformers-base, transformers-compat, unordered-containers - , utf8-string, vector, wai, wai-websockets, warp, websockets + , parsec, pattern-arrows, process, protolude, purescript-cst + , QuickCheck, regex-base, regex-tdfa, safe, scientific, semialign + , semigroups, serialise, sourcemap, split, stm, stringsearch, syb + , text, these, time, transformers, transformers-base + , transformers-compat, unordered-containers, utf8-string, vector + , wai, wai-websockets, warp, websockets }: mkDerivation { pname = "purescript"; - version = "0.14.1"; - sha256 = "0cqrasq0my2nsslpvy1mfhc2nqj2bfcilv8acd600bn9f6qgn4yv"; + version = "0.14.2"; + sha256 = "12gk4c311v39gh0kp5s97gia2xrglzzkpnhisbpxc4h7nd9dqf5m"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -211479,11 +212045,11 @@ self: { directory dlist edit-distance file-embed filepath fsnotify Glob haskeline language-javascript lifted-async lifted-base memory microlens microlens-platform monad-control monad-logger mtl - parallel parsec pattern-arrows process protolude purescript-ast - purescript-cst regex-tdfa safe scientific semialign semigroups - serialise sourcemap split stm stringsearch syb text these time - transformers transformers-base transformers-compat - unordered-containers utf8-string vector + parallel parsec pattern-arrows process protolude purescript-cst + regex-tdfa safe scientific semialign semigroups serialise sourcemap + split stm stringsearch syb text these time transformers + transformers-base transformers-compat unordered-containers + utf8-string vector ]; libraryToolDepends = [ happy ]; executableHaskellDepends = [ @@ -211494,12 +212060,11 @@ self: { fsnotify gitrev Glob haskeline http-types language-javascript lifted-async lifted-base memory microlens microlens-platform monad-control monad-logger mtl network optparse-applicative - parallel parsec pattern-arrows process protolude purescript-ast - purescript-cst regex-tdfa safe scientific semialign semigroups - serialise sourcemap split stm stringsearch syb text these time - transformers transformers-base transformers-compat - unordered-containers utf8-string vector wai wai-websockets warp - websockets + parallel parsec pattern-arrows process protolude purescript-cst + regex-tdfa safe scientific semialign semigroups serialise sourcemap + split stm stringsearch syb text these time transformers + transformers-base transformers-compat unordered-containers + utf8-string vector wai wai-websockets warp websockets ]; executableToolDepends = [ happy ]; testHaskellDepends = [ @@ -211509,11 +212074,10 @@ self: { directory dlist edit-distance file-embed filepath fsnotify Glob haskeline hspec HUnit language-javascript lifted-async lifted-base memory microlens microlens-platform monad-control monad-logger mtl - parallel parsec pattern-arrows process protolude purescript-ast - purescript-cst regex-base regex-tdfa safe scientific semialign - semigroups serialise sourcemap split stm stringsearch syb tasty - tasty-golden tasty-hspec tasty-quickcheck text these time - transformers transformers-base transformers-compat + parallel parsec pattern-arrows process protolude purescript-cst + QuickCheck regex-base regex-tdfa safe scientific semialign + semigroups serialise sourcemap split stm stringsearch syb text + these time transformers transformers-base transformers-compat unordered-containers utf8-string vector ]; testToolDepends = [ happy hspec-discover ]; @@ -211578,25 +212142,20 @@ self: { }) {}; "purescript-cst" = callPackage - ({ mkDerivation, array, base, base-compat, bytestring, containers - , dlist, filepath, happy, purescript-ast, scientific, semigroups - , tasty, tasty-golden, tasty-quickcheck, text + ({ mkDerivation, aeson, array, base, base-compat, bytestring + , containers, deepseq, dlist, filepath, happy, microlens, mtl + , protolude, scientific, semigroups, serialise, text, vector }: mkDerivation { pname = "purescript-cst"; - version = "0.1.1.0"; - sha256 = "05jqf9c0pakbjvr2zvybaxg9rfi87dadsx4srjlrw294r2sz969r"; + version = "0.2.0.0"; + sha256 = "0spsl9aq7hg2pkqawwjirgdr8ypzpb9amf2pznxmn6wm9ppaq73s"; libraryHaskellDepends = [ - array base containers dlist purescript-ast scientific semigroups - text + aeson array base base-compat bytestring containers deepseq dlist + filepath microlens mtl protolude scientific semigroups serialise + text vector ]; libraryToolDepends = [ happy ]; - testHaskellDepends = [ - array base base-compat bytestring containers dlist filepath - purescript-ast scientific semigroups tasty tasty-golden - tasty-quickcheck text - ]; - testToolDepends = [ happy ]; description = "PureScript Programming Language Concrete Syntax Tree"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; @@ -211839,8 +212398,8 @@ self: { }: mkDerivation { pname = "pusher-http-haskell"; - version = "2.1.0.2"; - sha256 = "0xrmjdika7y2hkp67kzh7xqc3v9j6db1rq2ksih1j9yypa1iihka"; + version = "2.1.0.3"; + sha256 = "1v9mibzvj5qfx9b5wgg9ragqd54xqmxb20afnmnw5c5yiglzazxd"; libraryHaskellDepends = [ aeson base base16-bytestring bytestring cryptonite hashable http-client http-client-tls http-types memory text time @@ -211969,6 +212528,7 @@ self: { description = "Creating graphics for pencil puzzles"; license = lib.licenses.mit; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "puzzle-draw-cmdline" = callPackage @@ -214212,29 +214772,37 @@ self: { }) {}; "raaz" = callPackage - ({ mkDerivation, base, blaze-builder, bytestring, criterion + ({ mkDerivation, attoparsec, base, bytestring , criterion-measurement, deepseq, hspec, hspec-discover, HUnit - , optparse-applicative, pretty, QuickCheck, transformers, vector + , optparse-applicative, pretty, QuickCheck, vector }: mkDerivation { pname = "raaz"; - version = "0.2.2"; - sha256 = "1v7zyk61vk4d6xniqq4fglwccgpx9clx7hxp1xr531spshadq99p"; + version = "0.3.0"; + sha256 = "0a322ji29s537kz1mazbl7grbg0s1wkz2cxg74zlvqa47xbk20k1"; isLibrary = true; isExecutable = true; - libraryHaskellDepends = [ base bytestring deepseq vector ]; - executableHaskellDepends = [ base optparse-applicative ]; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + base bytestring criterion-measurement deepseq hspec HUnit pretty + QuickCheck vector + ]; + executableHaskellDepends = [ + base bytestring deepseq optparse-applicative vector + ]; testHaskellDepends = [ - base bytestring hspec hspec-discover HUnit QuickCheck transformers - vector + attoparsec base bytestring deepseq hspec hspec-discover HUnit + QuickCheck vector ]; testToolDepends = [ hspec-discover ]; benchmarkHaskellDepends = [ - base blaze-builder bytestring criterion criterion-measurement - pretty + base bytestring criterion-measurement deepseq pretty vector ]; - description = "The raaz cryptographic library"; - license = lib.licenses.bsd3; + doHaddock = false; + description = "Fast and type safe cryptography"; + license = "(Apache-2.0 OR BSD-3-Clause)"; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "rabocsv2qif" = callPackage @@ -214272,10 +214840,8 @@ self: { ({ mkDerivation, base, HUnit, lens, profunctors }: mkDerivation { pname = "radian"; - version = "0.1"; - sha256 = "150vb9wk73avh8rrsz92y1fcwlm30w4k23lbdncb8ivinqhdi4pv"; - revision = "1"; - editedCabalFile = "1mkk17rrg2z6s1qkzz7qcm6q6qvgmcmvii9rzjzgn73m1x1l5rim"; + version = "0.2"; + sha256 = "18kgxwlfrd70z43z8sg50hz3xhr2iaa1cnc3gc0dz9g8195w8w6q"; libraryHaskellDepends = [ base profunctors ]; testHaskellDepends = [ base HUnit lens ]; description = "Isomorphisms for measurements that use radians"; @@ -216279,7 +216845,9 @@ self: { ]; description = "Programmatically edit MIDI events via ALSA and reactive-banana"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; + platforms = [ + "aarch64-linux" "armv7l-linux" "i686-linux" "x86_64-linux" + ]; }) {}; "reactive-banana" = callPackage @@ -216302,8 +216870,6 @@ self: { ]; description = "Library for functional reactive programming (FRP)"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; - broken = true; }) {}; "reactive-banana-automation" = callPackage @@ -216320,7 +216886,6 @@ self: { testHaskellDepends = [ base doctest ]; description = "home (etc) automation using reactive-banana"; license = lib.licenses.agpl3Only; - hydraPlatforms = lib.platforms.none; }) {}; "reactive-banana-bunch" = callPackage @@ -216336,7 +216901,6 @@ self: { ]; description = "Extend reactive-banana to multiple events per time point"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "reactive-banana-gi-gtk" = callPackage @@ -216354,6 +216918,7 @@ self: { description = "Simple reactive programming with GTK GObject Introspection"; license = lib.licenses.publicDomain; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "reactive-banana-sdl" = callPackage @@ -216384,6 +216949,7 @@ self: { description = "Reactive Banana integration with SDL2"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "reactive-banana-threepenny" = callPackage @@ -216399,6 +216965,7 @@ self: { description = "Examples for the reactive-banana library, using threepenny-gui"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "reactive-banana-wx" = callPackage @@ -216492,7 +217059,6 @@ self: { ]; description = "Process MIDI events via reactive-banana and JACK"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "reactive-midyim" = callPackage @@ -216512,7 +217078,6 @@ self: { ]; description = "Process MIDI events via reactive-banana"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "reactive-thread" = callPackage @@ -216941,46 +217506,24 @@ self: { }) {}; "rebase" = callPackage - ({ mkDerivation, base, bifunctors, bytestring, comonad, containers - , contravariant, contravariant-extras, deepseq, dlist, either - , hashable, mtl, profunctors, scientific, selective, semigroupoids - , semigroups, stm, text, time, transformers, unordered-containers - , uuid, vector, void - }: - mkDerivation { - pname = "rebase"; - version = "1.6.1"; - sha256 = "020aw7wlgx8nqbq6ara13szgxw2q0n0hx3vrsn2lfp53b2jdsvax"; - libraryHaskellDepends = [ - base bifunctors bytestring comonad containers contravariant - contravariant-extras deepseq dlist either hashable mtl profunctors - scientific selective semigroupoids semigroups stm text time - transformers unordered-containers uuid vector void - ]; - description = "A more progressive alternative to the \"base\" package"; - license = lib.licenses.mit; - }) {}; - - "rebase_1_12_0_1" = callPackage ({ mkDerivation, base, bifunctors, bytestring, comonad, containers , contravariant, deepseq, dlist, either, hashable, hashable-time , mtl, profunctors, scientific, selective, semigroupoids, stm, text - , time, transformers, unordered-containers, uuid, vector + , time, transformers, unordered-containers, uuid-types, vector , vector-instances, void }: mkDerivation { pname = "rebase"; - version = "1.12.0.1"; - sha256 = "1yl09702psialskvm39i9rl3sag853qr1237jhs79yk7nhvdlaqx"; + version = "1.13.0.1"; + sha256 = "0sh1vha10n28c4jb97p99xglghqph8ppydqzbnb2h25a34057927"; libraryHaskellDepends = [ base bifunctors bytestring comonad containers contravariant deepseq dlist either hashable hashable-time mtl profunctors scientific selective semigroupoids stm text time transformers - unordered-containers uuid vector vector-instances void + unordered-containers uuid-types vector vector-instances void ]; description = "A more progressive alternative to the \"base\" package"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "rebindable" = callPackage @@ -217060,8 +217603,8 @@ self: { }: mkDerivation { pname = "record-dot-preprocessor"; - version = "0.2.10"; - sha256 = "1zwkc5mqcxlv4cm7qd75sdmvjckvpchcrqphsq82val41mp27nk5"; + version = "0.2.11"; + sha256 = "1hsk7n8hrskj30wcil4rvjhng3zcj7f9a0dn69371iay4x8d75md"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base extra ghc uniplate ]; @@ -217945,6 +218488,8 @@ self: { pname = "reflex"; version = "0.8.1.0"; sha256 = "0p27dj7fckkvw9li69whcfrv1cd59kkp6qbvfmndzx8fbh44ggbp"; + revision = "1"; + editedCabalFile = "07bvrcfbnz1pv15cmk4f780aiw72gbhsji20kqyk8kk7d2jwpcab"; libraryHaskellDepends = [ base bifunctors comonad constraints-extras containers data-default dependent-map dependent-sum exception-transformers haskell-src-exts @@ -218075,6 +218620,22 @@ self: { maintainers = with lib.maintainers; [ maralorn ]; }) {}; + "reflex-dom-ace" = callPackage + ({ mkDerivation, base, containers, data-default, ghcjs-dom, jsaddle + , lens, mtl, reflex-dom-core, text + }: + mkDerivation { + pname = "reflex-dom-ace"; + version = "0.3.0.3"; + sha256 = "024xwgqasf2sciz0paq7p1ry1njcz46pz2l1cyjxm562hjqvsb0h"; + libraryHaskellDepends = [ + base containers data-default ghcjs-dom jsaddle lens mtl + reflex-dom-core text + ]; + description = "Basic support for using the Ace editor with Reflex"; + license = lib.licenses.bsd3; + }) {}; + "reflex-dom-colonnade" = callPackage ({ mkDerivation, base, colonnade, containers, contravariant, reflex , reflex-dom, semigroups, text, vector @@ -218286,6 +218847,8 @@ self: { pname = "reflex-fsnotify"; version = "0.2.1.2"; sha256 = "1g5zm12ypqr0agrgmbyglhh5f9p933hba2dismbyywsgdmn1i9bl"; + revision = "1"; + editedCabalFile = "1hpi0wnvif72n3mfnrypa3psl82wfw60l36cn2j8fdp7lrvzxa88"; libraryHaskellDepends = [ base containers directory filepath fsnotify reflex ]; @@ -218534,6 +219097,8 @@ self: { pname = "reflex-process"; version = "0.3.1.0"; sha256 = "1z86h7wkzg69d6kw0y37pzr4ldpg9qkl8wx5mw7r1h82isb9wgbl"; + revision = "1"; + editedCabalFile = "16vwrz7amccy8j2wn9146j8lif35f7ycpssd0p649ha746s7hrf4"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -218617,10 +219182,8 @@ self: { }: mkDerivation { pname = "reflex-vty"; - version = "0.1.4.1"; - sha256 = "0hv2h1pzz808bg2bvignb3d2wma1aw96zdf545f9p01vjr1b656a"; - revision = "1"; - editedCabalFile = "0gpfbpzcg516kghsgwc4gnbp217p6phw9bh1qhlkzd0ji35gdibm"; + version = "0.1.4.2"; + sha256 = "07fjw95w8ahllbs1zp215apck01abcrv4sshid8z6972g7n7392r"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -219225,10 +219788,8 @@ self: { }: mkDerivation { pname = "regex-tdfa"; - version = "1.3.1.0"; - sha256 = "1h1fliv2zjxwmddl9wnn7ckxxpgy1049hdfg6fcknyrr7mw7dhqm"; - revision = "2"; - editedCabalFile = "1hvcqdywwlcpia7qss7ikr9bq0lvkk8z0mjgaylaqpzlgh00z3gb"; + version = "1.3.1.1"; + sha256 = "1msrq31k4jmn2lmrdzn87jqarqhw265ca69rfg5jpa5adrzm3gmi"; libraryHaskellDepends = [ array base bytestring containers mtl parsec regex-base text ]; @@ -219839,6 +220400,32 @@ self: { license = lib.licenses.mit; }) {}; + "rel8" = callPackage + ({ mkDerivation, aeson, base, bytestring, case-insensitive + , containers, contravariant, hasql, hedgehog, lifted-base + , monad-control, opaleye, profunctors, scientific, semialign + , semigroupoids, tasty, tasty-hedgehog, text, these, time + , tmp-postgres, transformers, uuid + }: + mkDerivation { + pname = "rel8"; + version = "1.0.0.1"; + sha256 = "1kwvib3chqw5xrz6v7z0jy75mgyhqqb755xzn02zz2hvjwfcqc6v"; + libraryHaskellDepends = [ + aeson base bytestring case-insensitive contravariant hasql opaleye + profunctors scientific semialign semigroupoids text these time + transformers uuid + ]; + testHaskellDepends = [ + base bytestring case-insensitive containers hasql hedgehog + lifted-base monad-control scientific tasty tasty-hedgehog text time + tmp-postgres uuid + ]; + description = "Hey! Hey! Can u rel8?"; + license = lib.licenses.bsd3; + maintainers = with lib.maintainers; [ sternenseemann ]; + }) {}; + "relacion" = callPackage ({ mkDerivation, array, base, containers }: mkDerivation { @@ -221081,6 +221668,39 @@ self: { maintainers = with lib.maintainers; [ maralorn ]; }) {}; + "req_3_9_1" = callPackage + ({ mkDerivation, aeson, authenticate-oauth, base, blaze-builder + , bytestring, case-insensitive, connection, exceptions, hspec + , hspec-core, hspec-discover, http-api-data, http-client + , http-client-tls, http-types, modern-uri, monad-control, mtl + , QuickCheck, retry, template-haskell, text, time, transformers + , transformers-base, unliftio-core, unordered-containers + }: + mkDerivation { + pname = "req"; + version = "3.9.1"; + sha256 = "0468ah4142jrqp5l3pw4izrw6f6kznisan888b30jhif4c6xncr0"; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + aeson authenticate-oauth base blaze-builder bytestring + case-insensitive connection exceptions http-api-data http-client + http-client-tls http-types modern-uri monad-control mtl retry + template-haskell text time transformers transformers-base + unliftio-core + ]; + testHaskellDepends = [ + aeson base blaze-builder bytestring case-insensitive hspec + hspec-core http-client http-types modern-uri monad-control mtl + QuickCheck retry template-haskell text time unordered-containers + ]; + testToolDepends = [ hspec-discover ]; + doCheck = false; + description = "HTTP client library"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + maintainers = with lib.maintainers; [ maralorn ]; + }) {}; + "req-conduit" = callPackage ({ mkDerivation, base, bytestring, conduit, conduit-extra, hspec , http-client, req, resourcet, temporary, transformers, weigh @@ -221263,25 +221883,13 @@ self: { ({ mkDerivation, rebase }: mkDerivation { pname = "rerebase"; - version = "1.6.1"; - sha256 = "0lyi925jk6jbi3qc5xmv61ag07ff9d3xxmf9hfjlblqw2y9fsy93"; + version = "1.13.0.1"; + sha256 = "0j50l96whwi65ir35nfhn24h6103zy1ilfjsqiax63ajzw169fkv"; libraryHaskellDepends = [ rebase ]; description = "Reexports from \"base\" with a bunch of other standard libraries"; license = lib.licenses.mit; }) {}; - "rerebase_1_12_0_1" = callPackage - ({ mkDerivation, rebase }: - mkDerivation { - pname = "rerebase"; - version = "1.12.0.1"; - sha256 = "0kh0022hfviywa4rkwnrqygc7s3vg8qvr9znh66v5c1i3gaibzq5"; - libraryHaskellDepends = [ rebase ]; - description = "Reexports from \"base\" with a bunch of other standard libraries"; - license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; - }) {}; - "reroute" = callPackage ({ mkDerivation, base, criterion, deepseq, graph-core, hashable , hspec, http-api-data, hvect, mtl, random, regex-compat, text @@ -222573,27 +223181,27 @@ self: { ({ mkDerivation, aeson, async, attoparsec, base, bifunctors, binary , blaze-builder, bytestring, containers, criterion , data-default-class, deepseq, enclosed-exceptions, exceptions - , hashable, HUnit, mersenne-random-pure64, monad-control, mtl - , network, process, protocol-buffers, pureMD5, QuickCheck, random + , hashable, HUnit, mersenne-random-pure64, microlens, monad-control + , mtl, network, process, proto-lens, pureMD5, QuickCheck, random , resource-pool, riak-protobuf, semigroups, stm, tasty, tasty-hunit , tasty-quickcheck, template-haskell, text, time, transformers , transformers-base, unordered-containers, vector, yaml }: mkDerivation { pname = "riak"; - version = "1.1.2.6"; - sha256 = "0dialr56k5406zav54hk4lx6dr9yisv8yq0hrjjga5my08ga5v4y"; + version = "1.2.0.0"; + sha256 = "0dbdw7jxs2sklj32m7qv8nf6g3dsax2pr8qbkm72iy32yryx6ji0"; libraryHaskellDepends = [ aeson async attoparsec base bifunctors binary blaze-builder bytestring containers data-default-class deepseq enclosed-exceptions exceptions hashable mersenne-random-pure64 - monad-control network protocol-buffers pureMD5 random resource-pool + monad-control network proto-lens pureMD5 random resource-pool riak-protobuf semigroups stm text time transformers transformers-base unordered-containers vector ]; testHaskellDepends = [ - aeson base bytestring containers data-default-class HUnit mtl - process QuickCheck riak-protobuf semigroups tasty tasty-hunit + aeson base bytestring containers data-default-class HUnit microlens + mtl process QuickCheck riak-protobuf semigroups tasty tasty-hunit tasty-quickcheck template-haskell text yaml ]; benchmarkHaskellDepends = [ base bytestring criterion semigroups ]; @@ -222603,16 +223211,12 @@ self: { }) {}; "riak-protobuf" = callPackage - ({ mkDerivation, array, base, parsec, protocol-buffers - , protocol-buffers-descriptor - }: + ({ mkDerivation, base, proto-lens, proto-lens-runtime }: mkDerivation { pname = "riak-protobuf"; - version = "0.24.0.0"; - sha256 = "175sww7s8r1brl3iz2m3vxx8ffk059ciyvzxqfn47cwf8yljw10s"; - libraryHaskellDepends = [ - array base parsec protocol-buffers protocol-buffers-descriptor - ]; + version = "0.25.0.0"; + sha256 = "1r4rhgdwr2pnr01szdci8l0nmf0fd1vbj8a323lj946rj472kxri"; + libraryHaskellDepends = [ base proto-lens proto-lens-runtime ]; description = "Haskell types for the Riak protocol buffer API"; license = "unknown"; hydraPlatforms = lib.platforms.none; @@ -222624,8 +223228,8 @@ self: { }: mkDerivation { pname = "riak-protobuf-lens"; - version = "0.24.0.0"; - sha256 = "1qmpa4vg5mxkx804c2bl6dnsgwrvv9hj62a208ns2smps6fnbndh"; + version = "0.25.0.0"; + sha256 = "1znqdz51aaripzz1qxkfpwcmrygg462kd1vf47v1gm6rwk55ianl"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -223009,6 +223613,20 @@ self: { license = lib.licenses.mit; }) {}; + "rio-app" = callPackage + ({ mkDerivation, base, optparse-simple, resourcet, rio }: + mkDerivation { + pname = "rio-app"; + version = "0.1.0.0"; + sha256 = "0ra76ssnffykdjqy56zqf30nbj9y1bf01897kflj0y68ri7vzsva"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base resourcet rio ]; + executableHaskellDepends = [ base optparse-simple resourcet rio ]; + description = "Generic App type for rio"; + license = lib.licenses.bsd3; + }) {}; + "rio-orphans" = callPackage ({ mkDerivation, base, exceptions, fast-logger, hspec , monad-control, monad-logger, resourcet, rio, transformers-base @@ -223788,15 +224406,16 @@ self: { "rollbar" = callPackage ({ mkDerivation, aeson, base, basic-prelude, http-conduit - , lifted-base, monad-control, network, resourcet, text, vector + , lifted-base, monad-control, network, network-bsd, resourcet, text + , vector }: mkDerivation { pname = "rollbar"; - version = "1.1.2"; - sha256 = "1ip4bsnav2bwbbasz0mmfkq7cvi72jfdbz00r1ql4kpgwwkdhysz"; + version = "1.1.3"; + sha256 = "0mj8s2kfv8fw8mpb3xz8fvlyvdx46nsh1waw7jvw4cxphywfq9b8"; libraryHaskellDepends = [ aeson base basic-prelude http-conduit lifted-base monad-control - network resourcet text vector + network network-bsd resourcet text vector ]; description = "error tracking through rollbar.com"; license = lib.licenses.mit; @@ -224364,6 +224983,8 @@ self: { pname = "rounded"; version = "1.1"; sha256 = "0hja4ak3qd80zg996jwyi1kndj2vfsp10vwr4wyrcvppzl4gj4a0"; + revision = "1"; + editedCabalFile = "02zrazan3ljalfy1cnr3d0cdw7n426k5wg5xkifk87vb8ds2wx1j"; libraryHaskellDepends = [ base ghc-prim hgmp long-double reflection ]; @@ -224590,18 +225211,20 @@ self: { "rp-tree" = callPackage ({ mkDerivation, base, benchpress, boxes, bytestring, conduit - , containers, deepseq, hspec, QuickCheck, serialise, splitmix - , splitmix-distributions, transformers, vector, vector-algorithms + , containers, deepseq, heaps, hspec, mtl, QuickCheck, serialise + , splitmix, splitmix-distributions, text, transformers, vector + , vector-algorithms }: mkDerivation { pname = "rp-tree"; - version = "0.3.5"; - sha256 = "06av43wbyy68flcfdbz20dd3vmh4na44mh041z7h7rh6hzilzr1j"; + version = "0.6"; + sha256 = "0ww3ckf1bq24p4d52mip6mxxk0z65p3pq7d4a1xy8yalsjhyyl0h"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - base boxes bytestring conduit containers deepseq serialise splitmix - splitmix-distributions transformers vector vector-algorithms + base boxes bytestring conduit containers deepseq heaps mtl + serialise splitmix splitmix-distributions text transformers vector + vector-algorithms ]; executableHaskellDepends = [ base conduit containers splitmix splitmix-distributions @@ -224690,6 +225313,18 @@ self: { broken = true; }) {}; + "rpm-nvr" = callPackage + ({ mkDerivation, base, extra, hspec }: + mkDerivation { + pname = "rpm-nvr"; + version = "0.1.0"; + sha256 = "11w40vw18wbxhd0lbjh75a1bc4sqwh9xqv2iaa6kd8cd6c7ij26x"; + libraryHaskellDepends = [ base extra ]; + testHaskellDepends = [ base hspec ]; + description = "RPM package name-version-release datatypes"; + license = lib.licenses.gpl2Only; + }) {}; + "rpmbuild-order" = callPackage ({ mkDerivation, base, case-insensitive, containers, directory , extra, fgl, filepath, graphviz, hspec, optparse-applicative @@ -224697,8 +225332,10 @@ self: { }: mkDerivation { pname = "rpmbuild-order"; - version = "0.4.4"; - sha256 = "17zqnjn6zib0rvzj8gzpaj87b79v8fx5qlc6ifidi6rmykjqnx42"; + version = "0.4.5"; + sha256 = "1lz6w2nd8yq0arfpp6vnv7lazr9289wan00b6layfdhlql9f21vl"; + revision = "1"; + editedCabalFile = "05arkmpbh5fdqbqhkwl76isbigrsc0f54zkbdl21jap6k4g9kzsk"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -224709,12 +225346,31 @@ self: { base directory extra fgl optparse-applicative simple-cmd-args ]; testHaskellDepends = [ base extra hspec simple-cmd unix ]; - description = "Order RPM packages by dependencies"; + description = "Sort RPM packages in dependency order"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; broken = true; }) {}; + "rrb-vector" = callPackage + ({ mkDerivation, base, deepseq, gauge, hspec, indexed-traversable + , primitive, QuickCheck + }: + mkDerivation { + pname = "rrb-vector"; + version = "0.1.0.0"; + sha256 = "1kn4ygi0jrx0a6s6cbfxx60r2vqgzrqflm5yaffjlwb55jf88m8i"; + revision = "1"; + editedCabalFile = "1ydx0mxkqfjdgq9rqg2bzn5rqc0jdn8f40d4pa9yg0l00kjl4kcz"; + libraryHaskellDepends = [ + base deepseq indexed-traversable primitive + ]; + testHaskellDepends = [ base hspec QuickCheck ]; + benchmarkHaskellDepends = [ base gauge primitive ]; + description = "Efficient RRB-Vectors"; + license = lib.licenses.bsd3; + }) {}; + "rrule" = callPackage ({ mkDerivation, base, hspec, megaparsec, parser-combinators, text , time @@ -224818,8 +225474,8 @@ self: { pname = "rss"; version = "3000.2.0.7"; sha256 = "0z48xb610k1h29rg03q19y08fp78agxp2gr48innw5y3rz00s6ym"; - revision = "1"; - editedCabalFile = "0ql1ffjw0g1sdyz9icin4cq86i5b9ljzhvpivfbbyaipg2nc9z0s"; + revision = "3"; + editedCabalFile = "02jbnl7y76ahjdj2bciyjwgcglfs7sy60733z5c8610rk34f99dy"; libraryHaskellDepends = [ base HaXml network network-uri time ]; description = "A library for generating RSS 2.0 feeds."; license = lib.licenses.publicDomain; @@ -225481,29 +226137,99 @@ self: { }) {}; "safe-coloured-text" = callPackage - ({ mkDerivation, base, bytestring, terminfo, text }: + ({ mkDerivation, base, bytestring, text, validity + , validity-bytestring, validity-text + }: mkDerivation { pname = "safe-coloured-text"; + version = "0.1.0.0"; + sha256 = "1fcqwllpbp9x1r1bvyry6bmp2s9rp8rlr3i94hdiydc71hpl7a0w"; + libraryHaskellDepends = [ + base bytestring text validity validity-bytestring validity-text + ]; + description = "Safely output coloured text"; + license = lib.licenses.mit; + }) {}; + + "safe-coloured-text-gen" = callPackage + ({ mkDerivation, base, genvalidity, genvalidity-bytestring + , genvalidity-sydtest, genvalidity-text, safe-coloured-text + , sydtest, sydtest-discover, text + }: + mkDerivation { + pname = "safe-coloured-text-gen"; version = "0.0.0.0"; - sha256 = "0c07527g35gpxif8ia07x766pmzcf4m1cgjz9lkac973n12iwllx"; - libraryHaskellDepends = [ base bytestring terminfo text ]; + sha256 = "1z5livjv0n1i05i3fi58hi7vqwvycapnr5rp1m8rpgj8lhsbi9qx"; + libraryHaskellDepends = [ + base genvalidity genvalidity-bytestring genvalidity-text + safe-coloured-text + ]; + testHaskellDepends = [ + base genvalidity-sydtest safe-coloured-text sydtest text + ]; + testToolDepends = [ sydtest-discover ]; + license = lib.licenses.mit; + }) {}; + + "safe-coloured-text-layout" = callPackage + ({ mkDerivation, base, bytestring, safe-coloured-text, sydtest + , sydtest-discover, text, validity + }: + mkDerivation { + pname = "safe-coloured-text-layout"; + version = "0.0.0.0"; + sha256 = "11fbfqs96dlhyywkmy97b2fsws0fdsv3illdd61w3fckbxbdw6bw"; + libraryHaskellDepends = [ base safe-coloured-text text validity ]; + testHaskellDepends = [ + base bytestring safe-coloured-text sydtest text + ]; + testToolDepends = [ sydtest-discover ]; + description = "Safely layout output coloured text"; + license = lib.licenses.mit; + }) {}; + + "safe-coloured-text-layout-gen" = callPackage + ({ mkDerivation, base, genvalidity, genvalidity-sydtest + , safe-coloured-text, safe-coloured-text-gen + , safe-coloured-text-layout, sydtest, sydtest-discover + }: + mkDerivation { + pname = "safe-coloured-text-layout-gen"; + version = "0.0.0.0"; + sha256 = "1v4in8zl689j47jwac0z1k3rnnsc54qdclrbzja9aa364bmczzv8"; + libraryHaskellDepends = [ + base genvalidity safe-coloured-text-gen safe-coloured-text-layout + ]; + testHaskellDepends = [ + base genvalidity-sydtest safe-coloured-text safe-coloured-text-gen + safe-coloured-text-layout sydtest + ]; + testToolDepends = [ sydtest-discover ]; + license = lib.licenses.mit; + }) {}; + + "safe-coloured-text-terminfo" = callPackage + ({ mkDerivation, base, safe-coloured-text, terminfo }: + mkDerivation { + pname = "safe-coloured-text-terminfo"; + version = "0.0.0.0"; + sha256 = "0f94zzmanmxplkcg1s954rq00ppv69icyjpzr5s0g6c14zp1k85b"; + libraryHaskellDepends = [ base safe-coloured-text terminfo ]; description = "Safely output coloured text"; license = lib.licenses.mit; }) {}; "safe-decimal" = callPackage - ({ mkDerivation, base, Cabal, cabal-doctest, deepseq, doctest - , exceptions, hspec, hspec-discover, QuickCheck, scientific - , template-haskell + ({ mkDerivation, base, deepseq, doctest, exceptions, hspec + , hspec-discover, QuickCheck, scientific }: mkDerivation { pname = "safe-decimal"; - version = "0.2.0.0"; - sha256 = "03id56ib8m7gja2g5a8d6b26cz3h3zf3f3gq2ss7paxvwvn6wfib"; - setupHaskellDepends = [ base Cabal cabal-doctest ]; + version = "0.2.1.0"; + sha256 = "1q7l8rj5hhkxxhmmibcm0by7psvkw9lj82zd48slyfikmsdm9bdw"; libraryHaskellDepends = [ base deepseq exceptions scientific ]; testHaskellDepends = [ - base deepseq doctest hspec QuickCheck scientific template-haskell + base deepseq doctest hspec QuickCheck scientific ]; testToolDepends = [ hspec-discover ]; description = "Safe and very efficient arithmetic operations on fixed decimal point numbers"; @@ -225778,7 +226504,6 @@ self: { testHaskellDepends = [ base containers doctest ]; description = "Safe arithmetic operations"; license = lib.licenses.asl20; - hydraPlatforms = lib.platforms.none; }) {}; "safe-plugins" = callPackage @@ -225834,6 +226559,18 @@ self: { license = lib.licenses.mit; }) {}; + "safe-wild-cards" = callPackage + ({ mkDerivation, base, template-haskell, th-abstraction }: + mkDerivation { + pname = "safe-wild-cards"; + version = "1.0.0"; + sha256 = "1cgs7v30jamk2i8xbis7gc5n0f3c9rykxq7s81mxafyyj33ac36d"; + libraryHaskellDepends = [ base template-haskell th-abstraction ]; + testHaskellDepends = [ base ]; + description = "Use RecordWildCards safely"; + license = lib.licenses.bsd3; + }) {}; + "safecopy" = callPackage ({ mkDerivation, array, base, bytestring, cereal, containers , generic-data, HUnit, lens, lens-action, old-time, QuickCheck @@ -226111,8 +226848,8 @@ self: { pname = "salak"; version = "0.3.6"; sha256 = "00qyd09az0ldfidfgcki8z3r9gcpxmss3iyr99as5bky29rlz9n3"; - revision = "4"; - editedCabalFile = "07q9a24ry6h6r3m1av0dxz39dzmyjhlcrw1ww5jprqcf3xxjxhdz"; + revision = "5"; + editedCabalFile = "1dqanr95rrmjxfw882fa6as7n999883gfsy2765f3rprl7wlmigl"; libraryHaskellDepends = [ base bytestring containers data-default directory dlist exceptions filepath hashable heaps megaparsec mtl scientific text time @@ -226194,6 +226931,32 @@ self: { license = lib.licenses.mit; }) {inherit (pkgs) libsodium;}; + "saltine_0_2_0_0" = callPackage + ({ mkDerivation, base, bytestring, criterion, deepseq, hashable + , libsodium, profunctors, QuickCheck, semigroups, test-framework + , test-framework-quickcheck2, text + }: + mkDerivation { + pname = "saltine"; + version = "0.2.0.0"; + sha256 = "1xgrnm6qmm0mymq3dh4mdvzi8sfssnpz06xsrw8zdpa1vl0a0gm6"; + libraryHaskellDepends = [ + base bytestring deepseq hashable profunctors text + ]; + libraryPkgconfigDepends = [ libsodium ]; + testHaskellDepends = [ + base bytestring QuickCheck semigroups test-framework + test-framework-quickcheck2 text + ]; + benchmarkHaskellDepends = [ + base bytestring criterion deepseq text + ]; + benchmarkSystemDepends = [ libsodium ]; + description = "Cryptography that's easy to digest (NaCl/libsodium bindings)"; + license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + }) {inherit (pkgs) libsodium;}; + "saltine-quickcheck" = callPackage ({ mkDerivation, base, bytestring, bytestring-arbitrary, hex , libsodium, QuickCheck, saltine, tasty, tasty-quickcheck @@ -226518,8 +227281,8 @@ self: { }: mkDerivation { pname = "sandwich"; - version = "0.1.0.6"; - sha256 = "18fl6zdz7q5cm9ypnlgxyk5gh9r0yq481k04q0z740j2h1m5vgj8"; + version = "0.1.0.8"; + sha256 = "0b0k01r85wiaxn264ax3xva8a2gy7vv9qnig2fxyr42zdkm289jy"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -226611,8 +227374,8 @@ self: { }: mkDerivation { pname = "sandwich-webdriver"; - version = "0.1.0.4"; - sha256 = "0vmqm2f78vd8kk0adg7ldd6rlb5rw5hks9q705gws9dj6s4nyz9r"; + version = "0.1.0.5"; + sha256 = "113as1i4f3hghbwrf4ii8lnxxb8nih177ffjbx3shsddnhx0fa8y"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -226990,8 +227753,8 @@ self: { }: mkDerivation { pname = "sbv"; - version = "8.14"; - sha256 = "1yf350daksxwz084j81ngamr53jpz7y2fi4cnpni6vy16mb0sxz1"; + version = "8.15"; + sha256 = "11qzh2gfq9v8cxz6jjbipnfiwjs0hw34ghg5gdpr0h7bj77in30p"; enableSeparateDataOutput = true; libraryHaskellDepends = [ array async base containers deepseq directory filepath libBF mtl @@ -227818,20 +228581,20 @@ self: { "scientific" = callPackage ({ mkDerivation, base, binary, bytestring, containers, criterion , deepseq, hashable, integer-gmp, integer-logarithms, primitive - , QuickCheck, smallcheck, tasty, tasty-ant-xml, tasty-hunit - , tasty-quickcheck, tasty-smallcheck, text + , QuickCheck, smallcheck, tasty, tasty-hunit, tasty-quickcheck + , tasty-smallcheck, template-haskell, text }: mkDerivation { pname = "scientific"; - version = "0.3.6.2"; - sha256 = "03ql2f0ac8bsl524idy9xxa3kxisb2sj3avflzw580j5hzy0m397"; + version = "0.3.7.0"; + sha256 = "1aa3ngb71l2sh1x2829napnr1w285q0sn2f7z2wvi3ynng2238d3"; libraryHaskellDepends = [ base binary bytestring containers deepseq hashable integer-gmp - integer-logarithms primitive text + integer-logarithms primitive template-haskell text ]; testHaskellDepends = [ - base binary bytestring QuickCheck smallcheck tasty tasty-ant-xml - tasty-hunit tasty-quickcheck tasty-smallcheck text + base binary bytestring QuickCheck smallcheck tasty tasty-hunit + tasty-quickcheck tasty-smallcheck text ]; benchmarkHaskellDepends = [ base criterion ]; description = "Numbers represented using scientific notation"; @@ -227861,7 +228624,6 @@ self: { ]; description = "Scientific notation intended for tokenization"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "scion" = callPackage @@ -230261,13 +231023,13 @@ self: { , cassava, containers, data-default, directory, doctest , doctest-discover, file-embed, filepath, hlint, hspec , hspec-discover, html-charset, http-client, http-types - , optparse-applicative, QuickCheck, temporary, text, text-trie - , unicode-show, wai, warp, zip + , interpolatedstring-perl6, optparse-applicative, QuickCheck + , random, temporary, text, text-trie, unicode-show, wai, warp, zip }: mkDerivation { pname = "seonbi"; - version = "0.1.1"; - sha256 = "1jsikmlr647c51zmd471wnff6wzxybmp7bvidvyx5fkzb3nlhrqb"; + version = "0.2.0"; + sha256 = "1bj428ds0lw6vg0927mn9ss63zrrzfi9jn7fy1hpr583vywc8pba"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -230284,8 +231046,9 @@ self: { optparse-applicative text wai warp ]; testHaskellDepends = [ - aeson base bytestring containers doctest doctest-discover hlint - hspec hspec-discover QuickCheck text unicode-show + aeson base bytestring containers directory doctest doctest-discover + filepath hlint hspec hspec-discover interpolatedstring-perl6 + QuickCheck random text unicode-show ]; testToolDepends = [ hspec-discover ]; description = "SmartyPants for Korean language"; @@ -230471,8 +231234,8 @@ self: { }: mkDerivation { pname = "sequenceTools"; - version = "1.4.0.5"; - sha256 = "06wi43di0bja83iympx8pvka4zfwc4yyaw7chrddvxasnxqi369q"; + version = "1.5.0"; + sha256 = "0w3pk38nr0c6z0a7zpnh0kcdm7wpx7jcr0lmml56hab40filsh6c"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -230797,8 +231560,8 @@ self: { }: mkDerivation { pname = "servant-JuicyPixels"; - version = "0.3.0.5"; - sha256 = "1lhxb6z8xypx48k8hwzqpp92qww8wxbp3a1ggik4dfrcxkcklmlx"; + version = "0.3.0.6"; + sha256 = "16bdlgrz71h03lr2xcd2isclfzgr9h2xdl5lbnbs0v1czaxx7m6h"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -230848,6 +231611,8 @@ self: { pname = "servant-auth"; version = "0.4.0.0"; sha256 = "0v2g80kakjwpws92bk3anzy4k8vgxq99y7g3ib4amc5x6kxcmjh1"; + revision = "2"; + editedCabalFile = "0mbx44l1jnvfvppv6diiixqx5rdkb68djxl36m5sd12qz6rqmcx0"; libraryHaskellDepends = [ aeson base jose lens servant text unordered-containers ]; @@ -230922,8 +231687,8 @@ self: { pname = "servant-auth-docs"; version = "0.2.10.0"; sha256 = "0j1ynnrb6plrhpb2vzs2p7a9jb41llp0j1jwgap7hjhkwhyc7wxd"; - revision = "5"; - editedCabalFile = "1113d9hczzksy5bqf8pfriz9x158xr4a3p5na8p83vl46ddad82y"; + revision = "7"; + editedCabalFile = "10178ahxq36l9mik7dcn1c1f97fpp8b4r7xiqwiv21llp95s7cqp"; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ base lens servant servant-auth servant-docs text @@ -230935,6 +231700,8 @@ self: { testToolDepends = [ hspec-discover ]; description = "servant-docs/servant-auth compatibility"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "servant-auth-hmac" = callPackage @@ -230986,6 +231753,8 @@ self: { pname = "servant-auth-server"; version = "0.4.6.0"; sha256 = "0isl9pzzhfbs8pgh3qr2vbgfp0bh741dfa59sq7n3cmbkc6ndpkk"; + revision = "2"; + editedCabalFile = "1vf0mnbq0wmwha3aa2fn593dwibaw00l4agspgvchx7574jyr5wp"; libraryHaskellDepends = [ aeson base base64-bytestring blaze-builder bytestring case-insensitive cookie data-default-class entropy http-types jose @@ -231010,6 +231779,8 @@ self: { pname = "servant-auth-swagger"; version = "0.2.10.1"; sha256 = "029nvb4wxwl98ah26bgcq1b7izrnvssxwn1682liimvsh4a8bady"; + revision = "2"; + editedCabalFile = "0b8fawx2wv9zshn9i4abnwy4lgf3fkhbhm8bhfpgm9d867dx21y4"; libraryHaskellDepends = [ base lens servant servant-auth servant-swagger swagger2 text ]; @@ -231153,8 +231924,8 @@ self: { }: mkDerivation { pname = "servant-auth-wordpress"; - version = "1.0.0.1"; - sha256 = "08ngbgmzksp27n8znigrj5i2nvsqjansn4vv3my38vdqqgzm09w8"; + version = "1.0.0.2"; + sha256 = "0j4n5anlw3a2cgclmyblg01dcls91hzlmxgc2jkcdpwd49i0pv5n"; libraryHaskellDepends = [ base mtl servant-server text time wai wordpress-auth ]; @@ -231519,6 +232290,8 @@ self: { pname = "servant-docs"; version = "0.11.8"; sha256 = "0zbsv75zyfg44l4822qnmvw2naxcxwgnpzc55jnvz766l2dydjrb"; + revision = "1"; + editedCabalFile = "0bfhypzm02aqwckjrvjmhvf602di0pmp4r0rjbfcraxzvkrzm6qv"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -231768,8 +232541,8 @@ self: { pname = "servant-foreign"; version = "0.15.3"; sha256 = "1bz2ry5pd8cx5pmsvg7q29r9gd5kqjjv9nd97f7abwjqi8as2413"; - revision = "1"; - editedCabalFile = "0d9h941g7ja73g10az13pad9rjlp126b662f71q7c8yd6kh4jl9r"; + revision = "2"; + editedCabalFile = "1fdbxyyp2h5gcighjrww2mbg8z6givmhx2in8293kw58w7y2im0i"; libraryHaskellDepends = [ base base-compat http-types lens servant text ]; @@ -231779,6 +232552,17 @@ self: { license = lib.licenses.bsd3; }) {}; + "servant-gdp" = callPackage + ({ mkDerivation, aeson, base, gdp, servant-server, text }: + mkDerivation { + pname = "servant-gdp"; + version = "0.0.1.2"; + sha256 = "1ihj1dz3cx56c4gc31ixichl9gr64llhfpw60a4p9jr5dcqk7qll"; + libraryHaskellDepends = [ aeson base gdp servant-server text ]; + description = "Use Servant and GDP together to create expressive web API types"; + license = lib.licenses.bsd3; + }) {}; + "servant-generate" = callPackage ({ mkDerivation, base, servant, servant-server }: mkDerivation { @@ -232023,6 +232807,8 @@ self: { pname = "servant-js"; version = "0.9.4.2"; sha256 = "15n5s3i491cxjxj70wa8yhpipaz47q46s04l4ysc64wgijlnm8xy"; + revision = "1"; + editedCabalFile = "0lka70i2qjjj9x8i1ilsfgqq5hwdlrcyd2cj1qcpyhj85c9anxl3"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -232207,28 +232993,19 @@ self: { }) {}; "servant-multipart" = callPackage - ({ mkDerivation, array, base, bytestring, directory, http-client - , http-media, http-types, lens, network, random, resourcet, servant - , servant-client, servant-client-core, servant-docs - , servant-foreign, servant-server, string-conversions, tasty - , tasty-wai, text, transformers, wai, wai-extra, warp + ({ mkDerivation, base, bytestring, directory, http-types, lens + , resourcet, servant, servant-docs, servant-foreign + , servant-multipart-api, servant-server, string-conversions, tasty + , tasty-wai, text, wai, wai-extra }: mkDerivation { pname = "servant-multipart"; - version = "0.12"; - sha256 = "1hs1h66zjhknfnz1bdi5c0d2sfb20fc7x9adbc87gq168k8riqvl"; - revision = "2"; - editedCabalFile = "019zk4vlm9gv8n85qv6819i6qn0ddiz56birlmabz2n95l715m7y"; - isLibrary = true; - isExecutable = true; + version = "0.12.1"; + sha256 = "1p55kb3zhq25ncp7wimhggssn68abfgsnlldk13rk1iajaj6y8y5"; libraryHaskellDepends = [ - array base bytestring directory http-media lens random resourcet - servant servant-client-core servant-docs servant-foreign - servant-server string-conversions text transformers wai wai-extra - ]; - executableHaskellDepends = [ - base bytestring http-client network servant servant-client - servant-client-core servant-server text transformers wai warp + base bytestring directory lens resourcet servant servant-docs + servant-foreign servant-multipart-api servant-server + string-conversions text wai wai-extra ]; testHaskellDepends = [ base bytestring http-types servant-server string-conversions tasty @@ -232238,6 +233015,44 @@ self: { license = lib.licenses.bsd3; }) {}; + "servant-multipart-api" = callPackage + ({ mkDerivation, base, bytestring, servant, text, transformers }: + mkDerivation { + pname = "servant-multipart-api"; + version = "0.12.1"; + sha256 = "1gifa9g7ggs0plzffrd9a8j24dmqvgbkkdkfzyy7mpmwrjqw7mcj"; + libraryHaskellDepends = [ + base bytestring servant text transformers + ]; + description = "multipart/form-data (e.g file upload) support for servant"; + license = lib.licenses.bsd3; + }) {}; + + "servant-multipart-client" = callPackage + ({ mkDerivation, array, base, bytestring, http-client, http-media + , network, random, servant, servant-client, servant-client-core + , servant-multipart, servant-multipart-api, servant-server, text + , warp + }: + mkDerivation { + pname = "servant-multipart-client"; + version = "0.12.1"; + sha256 = "07haaf9nq96lfv2dhqf4319vl321f53v0mypbbg3swzb6rrfkw9h"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + array base bytestring http-media random servant servant-client-core + servant-multipart-api text + ]; + executableHaskellDepends = [ + base bytestring http-client network servant servant-client + servant-client-core servant-multipart servant-multipart-api + servant-server warp + ]; + description = "multipart/form-data (e.g file upload) support for servant"; + license = lib.licenses.bsd3; + }) {}; + "servant-named" = callPackage ({ mkDerivation, base, hspec, hspec-wai, http-types, servant , servant-server @@ -233236,6 +234051,85 @@ self: { license = lib.licenses.mit; }) {}; + "servant-util" = callPackage + ({ mkDerivation, aeson, autoexporter, base, containers + , data-default, fmt, hspec, hspec-discover, hspec-expectations + , http-client, http-types, insert-ordered-containers, lens + , megaparsec, mtl, pretty-terminal, QuickCheck, reflection + , regex-posix, safe-exceptions, servant, servant-client + , servant-client-core, servant-server, servant-swagger + , servant-swagger-ui, servant-swagger-ui-core, swagger2, text + , text-format, time, universum, wai, wai-extra, warp + }: + mkDerivation { + pname = "servant-util"; + version = "0.1.0.1"; + sha256 = "0idb3h2482hhrj9yvphdb74wxyr2y3rzfql2q2qn2a724b1bmax4"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + aeson base containers data-default fmt http-types + insert-ordered-containers lens megaparsec mtl pretty-terminal + QuickCheck reflection regex-posix safe-exceptions servant + servant-client servant-client-core servant-server servant-swagger + servant-swagger-ui servant-swagger-ui-core swagger2 text + text-format time universum wai + ]; + libraryToolDepends = [ autoexporter ]; + executableHaskellDepends = [ + aeson base containers data-default fmt http-types + insert-ordered-containers lens megaparsec mtl pretty-terminal + QuickCheck reflection regex-posix safe-exceptions servant + servant-client servant-client-core servant-server servant-swagger + servant-swagger-ui servant-swagger-ui-core swagger2 text + text-format time universum wai wai-extra warp + ]; + testHaskellDepends = [ + aeson base containers data-default fmt hspec hspec-expectations + http-client http-types insert-ordered-containers lens megaparsec + mtl pretty-terminal QuickCheck reflection regex-posix + safe-exceptions servant servant-client servant-client-core + servant-server servant-swagger servant-swagger-ui + servant-swagger-ui-core swagger2 text text-format time universum + wai warp + ]; + testToolDepends = [ hspec-discover ]; + description = "Servant servers utilities"; + license = lib.licenses.mpl20; + }) {}; + + "servant-util-beam-pg" = callPackage + ({ mkDerivation, autoexporter, base, beam-core, beam-postgres + , containers, hspec, hspec-discover, QuickCheck, servant + , servant-client, servant-client-core, servant-server, servant-util + , text, universum + }: + mkDerivation { + pname = "servant-util-beam-pg"; + version = "0.1.0.1"; + sha256 = "1qhs2bvlka3qm4kv64m5p5ldcd9nfgzs0za9vqy2z9fmdhzihxz1"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base beam-core beam-postgres containers servant servant-client + servant-client-core servant-server servant-util text universum + ]; + libraryToolDepends = [ autoexporter ]; + executableHaskellDepends = [ + base beam-core beam-postgres containers servant servant-client + servant-client-core servant-server servant-util text universum + ]; + testHaskellDepends = [ + base beam-core beam-postgres containers hspec QuickCheck servant + servant-client servant-client-core servant-server servant-util text + universum + ]; + testToolDepends = [ hspec-discover ]; + description = "Implementation of servant-util primitives for beam-postgres"; + license = lib.licenses.mpl20; + hydraPlatforms = lib.platforms.none; + }) {}; + "servant-validate" = callPackage ({ mkDerivation, base, containers, hspec, servant , should-not-typecheck, text @@ -233879,7 +234773,6 @@ self: { executableToolDepends = [ alex happy ]; description = "Treating files as sets to perform rapid set manipulation"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "setenv" = callPackage @@ -235742,6 +236635,8 @@ self: { testHaskellDepends = [ base doctest ]; description = "Link shortcuts for use in text markup"; license = lib.licenses.mpl20; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "shorten-strings" = callPackage @@ -236895,8 +237790,8 @@ self: { }: mkDerivation { pname = "simple-parser"; - version = "0.3.0"; - sha256 = "05a4aakq93nqmm632mijd64vjq07dlpcb1m2a57z6k1mhqinwxc5"; + version = "0.5.0"; + sha256 = "0qkgk7gxk69ns4067viz59wbp5hz05j1d26hv0wmbkhixsxa56s3"; libraryHaskellDepends = [ base containers list-t mmorph mtl nonempty-containers scientific text text-builder @@ -237182,8 +238077,8 @@ self: { }: mkDerivation { pname = "simple-ui"; - version = "0.1.2"; - sha256 = "106fcxl97gnkpv2bc50bg5zv8j7f1cdyxbl1l99p3rsq6wr6mr0m"; + version = "0.3.0"; + sha256 = "1dn9ma1kvn3gcgdcc09s38nlmcmcfifr7gcdn59ghp7pxxb8dxds"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base data-default-class exceptions lens mtl stm template-haskell @@ -237457,12 +238352,12 @@ self: { , hspec, hspec-core, HUnit, ini, iso8601-time, memory, mtl, network , network-transport, optparse-applicative, QuickCheck, random , simple-logger, sqlite-simple, stm, template-haskell, text, time - , timeit, transformers, unliftio, unliftio-core, x509 + , timeit, transformers, unliftio, unliftio-core, websockets, x509 }: mkDerivation { pname = "simplexmq"; - version = "0.3.1"; - sha256 = "0rc443nq4m1ghi5wbsaj6ravqs488lb2si0xmisg9h5ghsh204bf"; + version = "0.3.2"; + sha256 = "1bxg91ycmpa8762v5vdviqvyzkfap4iv9plnr7gcibf8vsd39qxl"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -237470,7 +238365,8 @@ self: { base64-bytestring bytestring containers cryptonite directory filepath generic-random iso8601-time memory mtl network network-transport QuickCheck random simple-logger sqlite-simple stm - template-haskell text time transformers unliftio unliftio-core x509 + template-haskell text time transformers unliftio unliftio-core + websockets x509 ]; executableHaskellDepends = [ ansi-terminal asn1-encoding asn1-types async attoparsec base @@ -237478,7 +238374,7 @@ self: { directory filepath generic-random ini iso8601-time memory mtl network network-transport optparse-applicative QuickCheck random simple-logger sqlite-simple stm template-haskell text time - transformers unliftio unliftio-core x509 + transformers unliftio unliftio-core websockets x509 ]; testHaskellDepends = [ ansi-terminal asn1-encoding asn1-types async attoparsec base @@ -237486,7 +238382,7 @@ self: { filepath generic-random hspec hspec-core HUnit iso8601-time memory mtl network network-transport QuickCheck random simple-logger sqlite-simple stm template-haskell text time timeit transformers - unliftio unliftio-core x509 + unliftio unliftio-core websockets x509 ]; description = "SimpleXMQ message broker"; license = lib.licenses.agpl3Only; @@ -237574,15 +238470,15 @@ self: { }) {inherit (pkgs.xorg) libXft;}; "single-tuple" = callPackage - ({ mkDerivation, base, hspec, hspec-discover, OneTuple, Only }: + ({ mkDerivation, base, ghc-prim, hspec, hspec-discover, OneTuple + , Only + }: mkDerivation { pname = "single-tuple"; - version = "0.1.1.0"; - sha256 = "1cviix5did4pm4bimg12v2qa9ms5icf19k3iz13g07d5q9jyiwji"; - revision = "1"; - editedCabalFile = "0gmki1bz7sn1lw5f1f1zp3rfphwba03fv6825djlidybln8snld0"; - libraryHaskellDepends = [ base OneTuple Only ]; - testHaskellDepends = [ base hspec OneTuple Only ]; + version = "0.1.2.0"; + sha256 = "1dxrdddfdvs69icv6ixjv5crfznllxvg8sjiw9xwyn26f36g2mw8"; + libraryHaskellDepends = [ base ghc-prim OneTuple Only ]; + testHaskellDepends = [ base ghc-prim hspec OneTuple Only ]; testToolDepends = [ hspec-discover ]; description = "a class for single tuple implementations"; license = lib.licenses.asl20; @@ -238371,6 +239267,28 @@ self: { license = lib.licenses.gpl2Only; }) {}; + "skylighting_0_10_5_2" = callPackage + ({ mkDerivation, base, binary, blaze-html, bytestring, containers + , pretty-show, skylighting-core, text + }: + mkDerivation { + pname = "skylighting"; + version = "0.10.5.2"; + sha256 = "152ywiy7h04xjy0fdl571jwahl6c9350isqbm4p0na4cjd9cczzh"; + configureFlags = [ "-fexecutable" ]; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base binary containers skylighting-core + ]; + executableHaskellDepends = [ + base blaze-html bytestring containers pretty-show text + ]; + description = "syntax highlighting library"; + license = lib.licenses.gpl2Only; + hydraPlatforms = lib.platforms.none; + }) {}; + "skylighting-core" = callPackage ({ mkDerivation, aeson, ansi-terminal, attoparsec, base , base64-bytestring, binary, blaze-html, bytestring @@ -238402,6 +239320,38 @@ self: { license = lib.licenses.bsd3; }) {}; + "skylighting-core_0_10_5_2" = callPackage + ({ mkDerivation, aeson, ansi-terminal, attoparsec, base + , base64-bytestring, binary, blaze-html, bytestring + , case-insensitive, colour, containers, criterion, Diff, directory + , filepath, mtl, pretty-show, QuickCheck, safe, tasty, tasty-golden + , tasty-hunit, tasty-quickcheck, text, transformers, utf8-string + , xml-conduit + }: + mkDerivation { + pname = "skylighting-core"; + version = "0.10.5.2"; + sha256 = "0bskci0gng6nf324wna9ss4xbr1mwjkgk3mlfkr96r1m3wza5g3d"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + aeson ansi-terminal attoparsec base base64-bytestring binary + blaze-html bytestring case-insensitive colour containers directory + filepath mtl safe text transformers utf8-string xml-conduit + ]; + testHaskellDepends = [ + aeson base bytestring containers Diff directory filepath + pretty-show QuickCheck tasty tasty-golden tasty-hunit + tasty-quickcheck text + ]; + benchmarkHaskellDepends = [ + base containers criterion directory filepath text + ]; + description = "syntax highlighting library"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "skylighting-extensions" = callPackage ({ mkDerivation, base, containers, skylighting, skylighting-modding , text @@ -238650,8 +239600,8 @@ self: { }: mkDerivation { pname = "slave-thread"; - version = "1.1"; - sha256 = "02b64s0m7k81s187wj81yzr7l73p79iyh7a59dqf7r72l4r7akbd"; + version = "1.1.0.1"; + sha256 = "05hz0qglxg889l3b0sw9f79xqssw70fd62a766xcvj7aalmrc32i"; libraryHaskellDepends = [ base deferred-folds focus foldl stm-containers ]; @@ -238944,8 +239894,8 @@ self: { }: mkDerivation { pname = "slynx"; - version = "0.5.0.2"; - sha256 = "0qpw3h1lbz299gb2jdcsj7svhxsi9icqaws8xpik58a3hb0r8icb"; + version = "0.5.1.1"; + sha256 = "1qj68fl98j0l83iny0wcdjmc80qnjc0dzkc5n1q3zl10wl10c8mc"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -238969,6 +239919,7 @@ self: { description = "Serialize to bytes"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "smallarray" = callPackage @@ -239418,7 +240369,6 @@ self: { libraryHaskellDepends = [ base bytesmith primitive ]; description = "Parse arrays of tokens"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "smith-cli" = callPackage @@ -240370,22 +241320,21 @@ self: { "snaplet-customauth" = callPackage ({ mkDerivation, aeson, base, base64-bytestring, binary - , binary-orphans, bytestring, configurator, containers, errors - , heist, hoauth2, http-client, http-client-tls, lens, map-syntax - , mtl, random, snap, snap-core, text, time, transformers - , unordered-containers, uri-bytestring, xmlhtml + , binary-instances, bytestring, bytestring-show, configurator + , containers, errors, heist, hoauth2, http-client, http-client-tls + , lens, map-syntax, mtl, random, snap, snap-core, text, time + , transformers, unordered-containers, uri-bytestring, xmlhtml }: mkDerivation { pname = "snaplet-customauth"; - version = "0.1.2"; - sha256 = "0y1a8c9j1q1pzby5v4ajnafm6dr9fvxvvkiynvscyjsf73gp2myb"; - revision = "2"; - editedCabalFile = "00wa07aqsyp1q8xrhi2xglwqwzm20qq0pxfb353idsja2qbvynfj"; + version = "0.2"; + sha256 = "10brxk6fpblbc58wjfhp3frx6r4d13iqz704v804r2hhsj35rkfz"; libraryHaskellDepends = [ - aeson base base64-bytestring binary binary-orphans bytestring - configurator containers errors heist hoauth2 http-client - http-client-tls lens map-syntax mtl random snap snap-core text time - transformers unordered-containers uri-bytestring xmlhtml + aeson base base64-bytestring binary binary-instances bytestring + bytestring-show configurator containers errors heist hoauth2 + http-client http-client-tls lens map-syntax mtl random snap + snap-core text time transformers unordered-containers + uri-bytestring xmlhtml ]; description = "Alternate authentication snaplet"; license = lib.licenses.bsd3; @@ -242077,22 +243026,22 @@ self: { }) {}; "sound-collage" = callPackage - ({ mkDerivation, array, base, Cabal, carray, containers, fft - , filepath, numeric-prelude, optparse-applicative, pathtype - , sample-frame, soxlib, storablevector, storablevector-carray + ({ mkDerivation, array, base, carray, containers, fft, filepath + , numeric-prelude, optparse-applicative, pathtype, sample-frame + , shell-utility, soxlib, storablevector, storablevector-carray , synthesizer-core, temporary, transformers, utility-ht }: mkDerivation { pname = "sound-collage"; - version = "0.2.0.1"; - sha256 = "0ywsy3q8f6y6k0vg4g21v6cm3n7662ngbzvfx502makdkf47i75a"; + version = "0.2.0.2"; + sha256 = "11rirlg25iawv4shwhvc4bcnzk4axvgk5n7yj05nnbpyx4s6r0pp"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ - array base Cabal carray containers fft filepath numeric-prelude - optparse-applicative pathtype sample-frame soxlib storablevector - storablevector-carray synthesizer-core temporary transformers - utility-ht + array base carray containers fft filepath numeric-prelude + optparse-applicative pathtype sample-frame shell-utility soxlib + storablevector storablevector-carray synthesizer-core temporary + transformers utility-ht ]; description = "Approximate a song from other pieces of sound"; license = lib.licenses.bsd3; @@ -242645,6 +243594,8 @@ self: { ]; description = "A unix-style (read from stdin, write to stdout) global hotkey daemon"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "spata" = callPackage @@ -242872,8 +243823,8 @@ self: { ({ mkDerivation, base, cmdargs, containers, express, leancheck }: mkDerivation { pname = "speculate"; - version = "0.4.6"; - sha256 = "0vpc2vxfpziyz0hzapni4j31g1i12m2gnsrq72zf42qbhjwif57g"; + version = "0.4.10"; + sha256 = "05yypi40k5ijml8zbv195pfl5xa1l5cz4sx5mz721jr6dvag6jn8"; libraryHaskellDepends = [ base cmdargs containers express leancheck ]; @@ -242881,6 +243832,8 @@ self: { benchmarkHaskellDepends = [ base express leancheck ]; description = "discovery of properties about Haskell functions"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "speculation" = callPackage @@ -243347,8 +244300,8 @@ self: { }: mkDerivation { pname = "splitmix-distributions"; - version = "0.8.0.0"; - sha256 = "1l7fh6nycsxy15m2w60pq6zp4iq811wzbklkyrc7z3wlghskqrmk"; + version = "0.9.0.0"; + sha256 = "0y6v93kgbldkf9pznrfy8848njy7cln7bd3nrx2b7dmrz6yd4rpz"; libraryHaskellDepends = [ base containers erf exceptions mtl splitmix transformers ]; @@ -244345,8 +245298,8 @@ self: { ({ mkDerivation, base, ghc-prim }: mkDerivation { pname = "stable-marriage"; - version = "0.2.0.0"; - sha256 = "1qxns33mmr1nxw6gabi5s1i70ksp0ls54q7cf95fy7vs1nwngz0n"; + version = "0.2.1.1"; + sha256 = "1ddmd7xk8a8a2baahnrn7gaj3ckn27f3hlcrimgi7m03kp00am17"; libraryHaskellDepends = [ base ghc-prim ]; testHaskellDepends = [ base ghc-prim ]; description = "algorithms around stable marriage"; @@ -244529,8 +245482,8 @@ self: { }: mkDerivation { pname = "stack-all"; - version = "0.2.1"; - sha256 = "07azc2phnljxwxskxlipmx52vjyavxn54q87k1bakapla469fdr4"; + version = "0.2.2"; + sha256 = "0bk22ryqvyc4r058yj3ngq33wv24m7r1alnbvg4c0h08fmwxi4m0"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -245675,6 +246628,8 @@ self: { pname = "statestack"; version = "0.3"; sha256 = "1b8yd314h8a97ggjv82cy4mr0f4scb5pjvslxq7hwxxq7cw7mgns"; + revision = "1"; + editedCabalFile = "03kk2zab7mcr5m89mxxl0zivag2hb024ijfdi0mp794hswncwhxy"; libraryHaskellDepends = [ base mtl transformers transformers-compat ]; @@ -246476,14 +247431,12 @@ self: { license = lib.licenses.bsd3; }) {}; - "stm_2_5_0_0" = callPackage + "stm_2_5_0_1" = callPackage ({ mkDerivation, array, base }: mkDerivation { pname = "stm"; - version = "2.5.0.0"; - sha256 = "1illcj8zgzmpl91hzgk0j74ha436a379gw13siq4gifbcrf6iqsr"; - revision = "1"; - editedCabalFile = "189fxk75h7n27kw7ndyn8nkxm3117qdh1dpag1mcs487kxghff62"; + version = "2.5.0.1"; + sha256 = "1fipf3bbk34mbld1apwnq6kbjxbrz2nc9cxxmhkk2bdcc2z4y7j5"; libraryHaskellDepends = [ array base ]; description = "Software Transactional Memory"; license = lib.licenses.bsd3; @@ -248077,6 +249030,8 @@ self: { pname = "streamly-fsnotify"; version = "1.1.1.0"; sha256 = "1xcw4rsrysh96d91wjmyzb5s7cls3rf0ilpv8dn525iqzv11fl3l"; + revision = "1"; + editedCabalFile = "0lcpps69dk4xr4wd1z5zpykvsfqrd0jlqx87rqbzjndgrw9xh685"; libraryHaskellDepends = [ base filepath fsnotify semirings streamly text time ]; @@ -248156,6 +249111,22 @@ self: { license = lib.licenses.bsd3; }) {}; + "streamt" = callPackage + ({ mkDerivation, async, base, criterion, hspec, logict, mtl, tasty + , tasty-hunit + }: + mkDerivation { + pname = "streamt"; + version = "0.5.0.0"; + sha256 = "0r2r6ribk85hwmzdn2imgajb28q5d5gbhysr62bw2jhmd5xy7985"; + libraryHaskellDepends = [ base logict mtl ]; + testHaskellDepends = [ + async base criterion hspec mtl tasty tasty-hunit + ]; + description = "Simple, Fair and Terminating Backtracking Monad Transformer"; + license = lib.licenses.bsd3; + }) {}; + "strelka" = callPackage ({ mkDerivation, attoparsec, attoparsec-data, base, base-prelude , base64-bytestring, bifunctors, bytestring @@ -248615,8 +249586,8 @@ self: { }: mkDerivation { pname = "string-interpolate"; - version = "0.3.1.0"; - sha256 = "0hyrcndhwd06phlmykyz7bklj5gnj4amcn11ckfvw0iws3sksl8d"; + version = "0.3.1.1"; + sha256 = "0hhzvrs9msyqsxwsqqm55lyxf85vhg4vcsszl735zsbs7431av69"; libraryHaskellDepends = [ base bytestring haskell-src-exts haskell-src-meta split template-haskell text text-conversions utf8-string @@ -248905,8 +249876,8 @@ self: { ({ mkDerivation, base, bytestring, text }: mkDerivation { pname = "stripe-concepts"; - version = "1.0.2.6"; - sha256 = "0vz8kiwg9q27jhr6gfvhqy9gykrl3zgy3m2ldk1np4v7y4fg7906"; + version = "1.0.2.8"; + sha256 = "03sqgmbbjqi18wjb96sc3lvc6p3bqk5sgsgbcf9z8k9rbdspribm"; libraryHaskellDepends = [ base bytestring text ]; description = "Types for the Stripe API"; license = lib.licenses.mit; @@ -249015,8 +249986,8 @@ self: { }: mkDerivation { pname = "stripe-scotty"; - version = "1.0.0.8"; - sha256 = "1r91lf3yjivfcxdnqy1ayfzs2ckszyx8x6f6fn8rjiz0gfv1v6hn"; + version = "1.1"; + sha256 = "15l3b01wf55k3cnwspkqvphs822cmdbnxyfcka8bi0vaj8xl84x9"; libraryHaskellDepends = [ aeson base bytestring http-types scotty stripe-concepts stripe-signature text unordered-containers @@ -249048,8 +250019,8 @@ self: { }: mkDerivation { pname = "stripe-signature"; - version = "1.0.0.8"; - sha256 = "0cybjsvzknsldqhf7fjd4ar2qjyym43x2ymmgw01f9a1ixyaxgmn"; + version = "1.0.0.10"; + sha256 = "04b5z6hnm000fii4qiczm4xpr41v55fgcj07yh35iwh4gwgc7c4h"; libraryHaskellDepends = [ base base16-bytestring bytestring cryptonite memory stripe-concepts text @@ -249086,8 +250057,8 @@ self: { }: mkDerivation { pname = "stripe-wreq"; - version = "1.0.1.8"; - sha256 = "1km0h94d1clgba0yy520yx54axdkf4xl5p5hnmn8ghg40r0pax73"; + version = "1.0.1.10"; + sha256 = "0pxaffbmnibivg8pdkvmyjkw8hz0grq3x84apd94mkji7vjg9xgh"; libraryHaskellDepends = [ aeson base bytestring lens stripe-concepts text unordered-containers wreq @@ -249111,6 +250082,8 @@ self: { ]; description = "Stripe-Library"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "strips" = callPackage @@ -249522,6 +250495,7 @@ self: { ]; description = "Apply CSS styles to a document tree"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; }) {}; "stylized" = callPackage @@ -250960,8 +251934,8 @@ self: { }: mkDerivation { pname = "swish"; - version = "0.10.0.4"; - sha256 = "0rad5rx8hxh0ay4q0lfbn4jggvl3wf3chhjf34rpppzdd6b7r75m"; + version = "0.10.0.5"; + sha256 = "0cf3aba585hnlaamwfxy9mfp8mjanza0zgp27gi2y66f79hcpq2q"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -251057,6 +252031,8 @@ self: { ]; description = "A simple web server for serving directories"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "sxml" = callPackage @@ -251130,23 +252106,24 @@ self: { "sydtest" = callPackage ({ mkDerivation, async, base, bytestring, containers, Diff, dlist - , envparse, MonadRandom, mtl, optparse-applicative, path, path-io - , pretty-show, QuickCheck, quickcheck-io, random-shuffle, safe - , safe-coloured-text, split, stm, sydtest-discover, text, yaml - , yamlparse-applicative + , envparse, filepath, MonadRandom, mtl, optparse-applicative, path + , path-io, pretty-show, QuickCheck, quickcheck-io, random-shuffle + , safe, safe-coloured-text, safe-coloured-text-terminfo, split, stm + , sydtest-discover, text, yaml, yamlparse-applicative }: mkDerivation { pname = "sydtest"; - version = "0.1.0.0"; - sha256 = "1r5p9vai0krzcnwxyicw9b00vzdqdm8zpj70y8snn4mdxxvhvyvq"; + version = "0.2.0.0"; + sha256 = "1k0jpnvfizvgscwpgd827w7x4nczlv7krwj10y35byj79wb5xy2m"; libraryHaskellDepends = [ - async base bytestring containers Diff dlist envparse MonadRandom - mtl optparse-applicative path path-io pretty-show QuickCheck - quickcheck-io random-shuffle safe safe-coloured-text split text - yaml yamlparse-applicative + async base bytestring containers Diff dlist envparse filepath + MonadRandom mtl optparse-applicative path path-io pretty-show + QuickCheck quickcheck-io random-shuffle safe safe-coloured-text + safe-coloured-text-terminfo split text yaml yamlparse-applicative ]; testHaskellDepends = [ - base bytestring path path-io QuickCheck safe-coloured-text stm text + base bytestring path path-io QuickCheck safe-coloured-text + safe-coloured-text-terminfo stm text ]; testToolDepends = [ sydtest-discover ]; description = "A modern testing framework for Haskell with good defaults and advanced testing features"; @@ -251154,6 +252131,73 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; + "sydtest_0_3_0_1" = callPackage + ({ mkDerivation, async, base, bytestring, containers, Diff, dlist + , envparse, filepath, MonadRandom, mtl, optparse-applicative, path + , path-io, pretty-show, QuickCheck, quickcheck-io, random-shuffle + , safe, safe-coloured-text, safe-coloured-text-terminfo, split, stm + , sydtest-discover, text, yaml, yamlparse-applicative + }: + mkDerivation { + pname = "sydtest"; + version = "0.3.0.1"; + sha256 = "0ddbjs2p2vzmzadggyvdpknmcw935jmj2m9nxki2apc9ciq6skig"; + libraryHaskellDepends = [ + async base bytestring containers Diff dlist envparse filepath + MonadRandom mtl optparse-applicative path path-io pretty-show + QuickCheck quickcheck-io random-shuffle safe safe-coloured-text + safe-coloured-text-terminfo split text yaml yamlparse-applicative + ]; + testHaskellDepends = [ + base bytestring path path-io QuickCheck safe-coloured-text + safe-coloured-text-terminfo stm text + ]; + testToolDepends = [ sydtest-discover ]; + description = "A modern testing framework for Haskell with good defaults and advanced testing features"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-aeson" = callPackage + ({ mkDerivation, aeson, aeson-pretty, base, bytestring, path + , path-io, sydtest, sydtest-discover, text + }: + mkDerivation { + pname = "sydtest-aeson"; + version = "0.0.0.0"; + sha256 = "0x4n27v60m6h44xwpf60j11j1r9r1zzixlszq21skrf2r6lla2gn"; + libraryHaskellDepends = [ + aeson aeson-pretty base bytestring path path-io sydtest text + ]; + testHaskellDepends = [ aeson base sydtest text ]; + testToolDepends = [ sydtest-discover ]; + description = "An aeson companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-amqp" = callPackage + ({ mkDerivation, aeson, amqp, async, base, bytestring, network + , path, path-io, port-utils, process, stm, sydtest + , sydtest-discover, sydtest-rabbitmq, sydtest-typed-process, text + , typed-process + }: + mkDerivation { + pname = "sydtest-amqp"; + version = "0.1.0.0"; + sha256 = "122n2nf0z2s925yjg6zlp3bvl70yprip57v6775vqglhbr959v8m"; + libraryHaskellDepends = [ + aeson amqp async base bytestring network path path-io port-utils + process stm sydtest sydtest-rabbitmq sydtest-typed-process text + typed-process + ]; + testHaskellDepends = [ amqp base sydtest ]; + testToolDepends = [ sydtest-discover ]; + description = "An amqp companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + "sydtest-discover" = callPackage ({ mkDerivation, base, filepath, optparse-applicative, path , path-io @@ -251173,14 +252217,113 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; + "sydtest-hedis" = callPackage + ({ mkDerivation, base, bytestring, hedis, network, path, path-io + , port-utils, sydtest, sydtest-discover, sydtest-typed-process + , text, typed-process + }: + mkDerivation { + pname = "sydtest-hedis"; + version = "0.0.0.0"; + sha256 = "0y31aqn4ra92arq054amhkcxxng0wsngv59ngwn05gc5jv6whi9j"; + libraryHaskellDepends = [ + base bytestring hedis network path path-io port-utils sydtest + sydtest-typed-process text typed-process + ]; + testHaskellDepends = [ base hedis sydtest ]; + testToolDepends = [ sydtest-discover ]; + description = "An hedis companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-hspec" = callPackage + ({ mkDerivation, base, hspec, hspec-core, mtl, sydtest + , sydtest-discover + }: + mkDerivation { + pname = "sydtest-hspec"; + version = "0.0.0.0"; + sha256 = "1fjj6v1f6rilzjcjgg0yqmhhmj067g45sw7q2xr8q9p7qiqnpkh1"; + libraryHaskellDepends = [ base hspec-core mtl sydtest ]; + testHaskellDepends = [ base hspec sydtest ]; + testToolDepends = [ sydtest-discover ]; + description = "An Hspec companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-mongo" = callPackage + ({ mkDerivation, base, binary, bson, bytestring, mongoDB, network + , path, path-io, port-utils, process, sydtest, sydtest-discover + , sydtest-process, text, yaml + }: + mkDerivation { + pname = "sydtest-mongo"; + version = "0.0.0.0"; + sha256 = "0jm2c05dxri0w83ii3pyphb2rrla72fih5g26w0indb51i0wlnq1"; + libraryHaskellDepends = [ + base binary bson bytestring mongoDB network path path-io port-utils + process sydtest sydtest-process text yaml + ]; + testHaskellDepends = [ base mongoDB sydtest text ]; + testToolDepends = [ sydtest-discover ]; + description = "An mongoDB companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-persistent" = callPackage + ({ mkDerivation, base, monad-logger, mtl, persistent + , persistent-sqlite, persistent-template, sydtest, sydtest-discover + }: + mkDerivation { + pname = "sydtest-persistent"; + version = "0.0.0.0"; + sha256 = "1r9mzjrffncl39d9q4kcwjwyv7srf08qnq65l8lvncrjci9fdc0i"; + libraryHaskellDepends = [ + base monad-logger mtl persistent persistent-template sydtest + ]; + testHaskellDepends = [ + base monad-logger persistent persistent-sqlite persistent-template + sydtest + ]; + testToolDepends = [ sydtest-discover ]; + description = "A persistent companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-persistent-postgresql" = callPackage + ({ mkDerivation, base, monad-logger, mtl, persistent + , persistent-postgresql, persistent-template, sydtest + , sydtest-discover, sydtest-persistent, tmp-postgres + }: + mkDerivation { + pname = "sydtest-persistent-postgresql"; + version = "0.2.0.0"; + sha256 = "0c3f9m3d7nryb2xvfp7zrqqi9136mgf89ccwg8vlaapnx1bqap43"; + libraryHaskellDepends = [ + base monad-logger mtl persistent persistent-postgresql sydtest + sydtest-persistent tmp-postgres + ]; + testHaskellDepends = [ + base persistent persistent-postgresql persistent-template sydtest + ]; + testToolDepends = [ sydtest-discover ]; + description = "An persistent-postgresql companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + "sydtest-persistent-sqlite" = callPackage ({ mkDerivation, base, monad-logger, mtl, persistent , persistent-sqlite, persistent-template, sydtest, sydtest-discover }: mkDerivation { pname = "sydtest-persistent-sqlite"; - version = "0.0.0.0"; - sha256 = "0p9xy2pdjnzd61dadvrzrnnxxz04xm0ypn2h1ssmrilfglic80iz"; + version = "0.1.0.0"; + sha256 = "1al80sym9r2h769szky5kpkllbs7gm4lc8gn9nlavj0in663x0ly"; libraryHaskellDepends = [ base monad-logger mtl persistent persistent-sqlite persistent-template sydtest @@ -251194,14 +252337,72 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; + "sydtest-persistent-sqlite_0_2_0_0" = callPackage + ({ mkDerivation, base, monad-logger, mtl, persistent + , persistent-sqlite, persistent-template, sydtest, sydtest-discover + , sydtest-persistent + }: + mkDerivation { + pname = "sydtest-persistent-sqlite"; + version = "0.2.0.0"; + sha256 = "1l17n6hgc64ngjfdgg6c1zhnlg6ks9bvb7hbv5yf454bhbm6p83s"; + libraryHaskellDepends = [ + base monad-logger mtl persistent persistent-sqlite + persistent-template sydtest sydtest-persistent + ]; + testHaskellDepends = [ + base persistent persistent-sqlite persistent-template sydtest + ]; + testToolDepends = [ sydtest-discover ]; + description = "A persistent-sqlite companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-process" = callPackage + ({ mkDerivation, base, bytestring, process, sydtest + , sydtest-discover + }: + mkDerivation { + pname = "sydtest-process"; + version = "0.0.0.0"; + sha256 = "1afjwxq7bq4q0g5qznffxfn20ikxxmr7yywiksfyfnyh4n0a1zsf"; + libraryHaskellDepends = [ base process sydtest ]; + testHaskellDepends = [ base bytestring process sydtest ]; + testToolDepends = [ sydtest-discover ]; + description = "A typed-process companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-rabbitmq" = callPackage + ({ mkDerivation, aeson, amqp, async, base, bytestring, network + , path, path-io, port-utils, process, stm, sydtest + , sydtest-discover, sydtest-typed-process, text, typed-process + }: + mkDerivation { + pname = "sydtest-rabbitmq"; + version = "0.1.0.0"; + sha256 = "0ra32y2w7hirjmaz67myq26waccznkl7gqmdnwdd93n6n1h1gb9p"; + libraryHaskellDepends = [ + aeson amqp async base bytestring network path path-io port-utils + process stm sydtest sydtest-typed-process text typed-process + ]; + testHaskellDepends = [ amqp base sydtest ]; + testToolDepends = [ sydtest-discover ]; + description = "An rabbitmq companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + "sydtest-servant" = callPackage ({ mkDerivation, base, http-client, servant, servant-client , servant-server, stm, sydtest, sydtest-discover, sydtest-wai }: mkDerivation { pname = "sydtest-servant"; - version = "0.0.0.0"; - sha256 = "147v5s10qvpp67aq7c240rsc4f356hvznc5gb538slh03d5vas4j"; + version = "0.1.0.0"; + sha256 = "0mn7fys01qakapnrcrlpji1kwc3cgywblid4wpipmh2kdpy61ndk"; libraryHaskellDepends = [ base http-client servant servant-client servant-server sydtest sydtest-wai @@ -251215,15 +252416,78 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; + "sydtest-servant_0_2_0_0" = callPackage + ({ mkDerivation, base, http-client, servant, servant-client + , servant-server, stm, sydtest, sydtest-discover, sydtest-wai + }: + mkDerivation { + pname = "sydtest-servant"; + version = "0.2.0.0"; + sha256 = "063bjik3yx7wbawdw1x4yw8ba8k83bq2xysczkl3mxqhj4c0ngx9"; + libraryHaskellDepends = [ + base http-client servant servant-client servant-server sydtest + sydtest-wai + ]; + testHaskellDepends = [ + base servant servant-client servant-server stm sydtest + ]; + testToolDepends = [ sydtest-discover ]; + description = "A servant companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-typed-process" = callPackage + ({ mkDerivation, base, bytestring, sydtest, sydtest-discover + , typed-process + }: + mkDerivation { + pname = "sydtest-typed-process"; + version = "0.0.0.0"; + sha256 = "0j5x2liimaxnd1p7bhkd1ic9vccxdph431rq3dmzl3f440qb3rws"; + libraryHaskellDepends = [ base sydtest typed-process ]; + testHaskellDepends = [ base bytestring sydtest typed-process ]; + testToolDepends = [ sydtest-discover ]; + description = "A typed-process companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + "sydtest-wai" = callPackage - ({ mkDerivation, base, http-client, http-types, stm, sydtest - , sydtest-discover, wai, warp + ({ mkDerivation, base, bytestring, case-insensitive, http-client + , http-types, mtl, network, pretty-show, stm, sydtest + , sydtest-discover, text, time, wai, warp }: mkDerivation { pname = "sydtest-wai"; - version = "0.0.0.0"; - sha256 = "01fqys32zj1rg9ciq04l7d4av3i1ynw3yinkgc84c3ia330i98ws"; - libraryHaskellDepends = [ base http-client sydtest wai warp ]; + version = "0.1.0.0"; + sha256 = "0fk1b7205h8ib35bp4pma37vk7cy7dwg0kkcv63k60sq1laj48rl"; + libraryHaskellDepends = [ + base bytestring case-insensitive http-client http-types mtl network + pretty-show sydtest text time wai warp + ]; + testHaskellDepends = [ + base http-client http-types stm sydtest wai + ]; + testToolDepends = [ sydtest-discover ]; + description = "A wai companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-wai_0_2_0_0" = callPackage + ({ mkDerivation, base, bytestring, case-insensitive, http-client + , http-types, mtl, network, pretty-show, stm, sydtest + , sydtest-discover, text, time, wai, warp + }: + mkDerivation { + pname = "sydtest-wai"; + version = "0.2.0.0"; + sha256 = "1zyhgwi8vhjg7mahp98fjgvkhqvh6zwfw3pmhwk57raavzsg2ksb"; + libraryHaskellDepends = [ + base bytestring case-insensitive http-client http-types mtl network + pretty-show sydtest text time wai warp + ]; testHaskellDepends = [ base http-client http-types stm sydtest wai ]; @@ -251236,18 +252500,46 @@ self: { "sydtest-yesod" = callPackage ({ mkDerivation, base, blaze-builder, bytestring, case-insensitive , conduit, containers, cookie, exceptions, http-client, http-types - , monad-logger, mtl, persistent, persistent-sqlite + , monad-logger, mtl, network, persistent, persistent-sqlite , persistent-template, pretty-show, QuickCheck, resourcet, sydtest , sydtest-discover, sydtest-persistent-sqlite, sydtest-wai, text , time, wai, xml-conduit, yesod, yesod-core, yesod-form, yesod-test }: mkDerivation { pname = "sydtest-yesod"; - version = "0.0.0.0"; - sha256 = "0mknn114q495f1bh829fi6c9gag58048c0m06yw0bkl0ikz32k67"; + version = "0.1.0.0"; + sha256 = "0kdylnhfvg9x314bydic811i21r1r5zs9cm1zpw6d7frsl99g24k"; libraryHaskellDepends = [ base blaze-builder bytestring case-insensitive containers cookie - exceptions http-client http-types mtl pretty-show sydtest + exceptions http-client http-types mtl network pretty-show sydtest + sydtest-wai text time wai xml-conduit yesod-core yesod-test + ]; + testHaskellDepends = [ + base bytestring conduit cookie http-client http-types monad-logger + mtl persistent persistent-sqlite persistent-template QuickCheck + resourcet sydtest sydtest-persistent-sqlite text yesod yesod-form + ]; + testToolDepends = [ sydtest-discover ]; + description = "A yesod companion library for sydtest"; + license = "unknown"; + hydraPlatforms = lib.platforms.none; + }) {}; + + "sydtest-yesod_0_2_0_1" = callPackage + ({ mkDerivation, base, blaze-builder, bytestring, case-insensitive + , conduit, containers, cookie, exceptions, http-client, http-types + , monad-logger, mtl, network, persistent, persistent-sqlite + , persistent-template, pretty-show, QuickCheck, resourcet, sydtest + , sydtest-discover, sydtest-persistent-sqlite, sydtest-wai, text + , time, wai, xml-conduit, yesod, yesod-core, yesod-form, yesod-test + }: + mkDerivation { + pname = "sydtest-yesod"; + version = "0.2.0.1"; + sha256 = "1h2gqwp968n1gyg9r7x82c6kdnnfs7m341j7w7wbx3rcvd57c2jf"; + libraryHaskellDepends = [ + base blaze-builder bytestring case-insensitive containers cookie + exceptions http-client http-types mtl network pretty-show sydtest sydtest-wai text time wai xml-conduit yesod-core yesod-test ]; testHaskellDepends = [ @@ -252838,8 +254130,6 @@ self: { ]; description = "Format tabular data as grid or table"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; - broken = true; }) {}; "table-tennis" = callPackage @@ -253003,8 +254293,8 @@ self: { }: mkDerivation { pname = "taffybar"; - version = "3.2.4"; - sha256 = "1hv0s9kp0ixha9qjgrp1l52w48z68ngk17a0c6364qc95qsd2ycp"; + version = "3.2.5"; + sha256 = "1gfdlqgdqq2ivvzj7cgqahpm2bmwg90ri5ss7ah38alrp5rvda1v"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -253610,6 +254900,28 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; + "talash" = callPackage + ({ mkDerivation, alfred-margaret, base, brick, bytestring + , colorful-monoids, directory, ghc-compact, intro, microlens + , microlens-th, text, unix, unordered-containers, vector + , vector-algorithms, vector-sized, vty + }: + mkDerivation { + pname = "talash"; + version = "0.1.1.1"; + sha256 = "0sa4ay2dc4srh5wbk72iznjwr5bjjhggafhf27zyyxjhnjvfgsq1"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + alfred-margaret base brick bytestring colorful-monoids directory + ghc-compact intro microlens microlens-th text unix + unordered-containers vector vector-algorithms vector-sized vty + ]; + executableHaskellDepends = [ base intro ]; + description = "Line oriented fast enough text search"; + license = lib.licenses.gpl3Only; + }) {}; + "tamarin-prover" = callPackage ({ mkDerivation, aeson, array, base, binary, blaze-builder , blaze-html, bytestring, cmdargs, conduit, containers, deepseq @@ -254310,24 +255622,6 @@ self: { }) {}; "tasty-hedgehog" = callPackage - ({ mkDerivation, base, hedgehog, tagged, tasty - , tasty-expected-failure - }: - mkDerivation { - pname = "tasty-hedgehog"; - version = "1.0.1.0"; - sha256 = "0vkmhqfydyxbvjjbwvwn0q1f1a2dl9wmhz0s7020frpzwqcjwm5b"; - revision = "1"; - editedCabalFile = "1yhj5jpgsr1mflsadf1fgaj8hh7y3dnfsg95m6bni7xprdnw6nf9"; - libraryHaskellDepends = [ base hedgehog tagged tasty ]; - testHaskellDepends = [ - base hedgehog tasty tasty-expected-failure - ]; - description = "Integration for tasty and hedgehog"; - license = lib.licenses.bsd3; - }) {}; - - "tasty-hedgehog_1_1_0_0" = callPackage ({ mkDerivation, base, hedgehog, tagged, tasty , tasty-expected-failure }: @@ -254341,7 +255635,6 @@ self: { ]; description = "Integration for tasty and hedgehog"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "tasty-hedgehog-coverage" = callPackage @@ -254386,14 +255679,14 @@ self: { license = lib.licenses.bsd3; }) {}; - "tasty-hspec_1_1_7" = callPackage + "tasty-hspec_1_2" = callPackage ({ mkDerivation, base, hspec, hspec-core, QuickCheck, tasty , tasty-quickcheck, tasty-smallcheck }: mkDerivation { pname = "tasty-hspec"; - version = "1.1.7"; - sha256 = "05738x9hvnwqlp91x2da3b3fpn84hbsha7850xphnh2bpbx3lbx1"; + version = "1.2"; + sha256 = "0hnq6q4mk2avirb8cgibaxj5m2c4rf5xsqry04zx4nc15la5xniw"; libraryHaskellDepends = [ base hspec hspec-core QuickCheck tasty tasty-quickcheck tasty-smallcheck @@ -254573,8 +255866,8 @@ self: { ({ mkDerivation, base, leancheck, tasty }: mkDerivation { pname = "tasty-leancheck"; - version = "0.0.1"; - sha256 = "06nki1l05hh5r0q2lkn4rmj0cl8hz7r7zc71r64fx2k9z65n5497"; + version = "0.0.2"; + sha256 = "1083xs3pvvwfindhkvd7g4bbiaa4g293vi7l2r25adbxz13snpdz"; libraryHaskellDepends = [ base leancheck tasty ]; testHaskellDepends = [ base leancheck tasty ]; description = "LeanCheck support for the Tasty test framework"; @@ -254729,6 +256022,30 @@ self: { license = lib.licenses.mit; }) {}; + "tasty-silver_3_2_2" = callPackage + ({ mkDerivation, ansi-terminal, async, base, bytestring, containers + , deepseq, directory, filepath, mtl, optparse-applicative, process + , process-extras, regex-tdfa, stm, tagged, tasty, tasty-hunit + , temporary, text, transformers + }: + mkDerivation { + pname = "tasty-silver"; + version = "3.2.2"; + sha256 = "0zsl6nna8ir215qyxhyh2czx4i16hzw1n1m8jw8ym02j6sp6iz13"; + libraryHaskellDepends = [ + ansi-terminal async base bytestring containers deepseq directory + filepath mtl optparse-applicative process process-extras regex-tdfa + stm tagged tasty temporary text + ]; + testHaskellDepends = [ + base directory filepath process tasty tasty-hunit temporary + transformers + ]; + description = "A fancy test runner, including support for golden tests"; + license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + }) {}; + "tasty-smallcheck" = callPackage ({ mkDerivation, base, optparse-applicative, smallcheck, tagged , tasty @@ -255164,6 +256481,8 @@ self: { ]; description = "Chart generation from tdigest"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "tdlib" = callPackage @@ -255493,6 +256812,8 @@ self: { ]; description = "Easy to use library for building Telegram bots"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "telegram-raw-api" = callPackage @@ -256362,7 +257683,6 @@ self: { libraryHaskellDepends = [ base reactive-banana termbox ]; description = "reactive-banana + termbox"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "termbox-bindings" = callPackage @@ -256523,35 +257843,37 @@ self: { }) {}; "termonad" = callPackage - ({ mkDerivation, adjunctions, base, Cabal, cabal-doctest + ({ mkDerivation, adjunctions, aeson, base, Cabal, cabal-doctest , classy-prelude, colour, constraints, containers, data-default - , directory, distributive, dyre, file-embed, filepath, focuslist - , genvalidity-containers, genvalidity-hspec, gi-gdk, gi-gio - , gi-glib, gi-gtk, gi-pango, gi-vte, gtk3, haskell-gi-base + , directory, distributive, doctest, dyre, file-embed, filepath + , focuslist, genvalidity-containers, genvalidity-hspec, gi-gdk + , gi-gio, gi-glib, gi-gtk, gi-pango, gi-vte, gtk3, haskell-gi-base , hedgehog, inline-c, lens, mono-traversable, pcre2, pretty-simple - , QuickCheck, tasty, tasty-hedgehog, tasty-hspec, text - , transformers, vte_291, xml-conduit, xml-html-qq, yaml + , QuickCheck, tasty, tasty-hedgehog, tasty-hspec, template-haskell + , text, transformers, unordered-containers, vte_291, xml-conduit + , xml-html-qq, yaml }: mkDerivation { pname = "termonad"; - version = "4.1.1.0"; - sha256 = "1v8w6wf5y3708pjya97zzq1w8vb3g8vqc46pbfy7rizg5jfbr2ba"; + version = "4.2.0.0"; + sha256 = "1g9zc1ddm47b8ry78crax8ry43sj1wv3272qv5r0y5jvz9y58r6r"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ - adjunctions base classy-prelude colour constraints containers + adjunctions aeson base classy-prelude colour constraints containers data-default directory distributive dyre file-embed filepath focuslist gi-gdk gi-gio gi-glib gi-gtk gi-pango gi-vte haskell-gi-base inline-c lens mono-traversable pretty-simple - QuickCheck text transformers xml-conduit xml-html-qq yaml + QuickCheck text transformers unordered-containers xml-conduit + xml-html-qq yaml ]; libraryPkgconfigDepends = [ gtk3 pcre2 vte_291 ]; executableHaskellDepends = [ base ]; testHaskellDepends = [ - base genvalidity-containers genvalidity-hspec hedgehog lens - QuickCheck tasty tasty-hedgehog tasty-hspec + base doctest genvalidity-containers genvalidity-hspec hedgehog lens + QuickCheck tasty tasty-hedgehog tasty-hspec template-haskell ]; description = "Terminal emulator configurable in Haskell"; license = lib.licenses.bsd3; @@ -256684,6 +258006,8 @@ self: { ]; description = "Tesla API client"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "test-fixture" = callPackage @@ -256786,8 +258110,8 @@ self: { ({ mkDerivation, base, leancheck, test-framework }: mkDerivation { pname = "test-framework-leancheck"; - version = "0.0.1"; - sha256 = "0bwzc0vq28cmy5r966jxhacijd2hkna4magd9aw5wz34dcp4qv13"; + version = "0.0.4"; + sha256 = "0aa21r999jj59plzkn1px02k3a87znwhagdjmdsik2xvy5wrzgzv"; libraryHaskellDepends = [ base leancheck test-framework ]; testHaskellDepends = [ base leancheck test-framework ]; description = "LeanCheck support for test-framework"; @@ -257415,28 +258739,6 @@ self: { }) {}; "texmath" = callPackage - ({ mkDerivation, base, bytestring, containers, directory, filepath - , mtl, pandoc-types, parsec, process, syb, temporary, text - , utf8-string, xml - }: - mkDerivation { - pname = "texmath"; - version = "0.12.2"; - sha256 = "0lqib59cnvxvgj6k8wk74g5xbamf63q3z7wnwc8r2d56z05djvxy"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - base containers mtl pandoc-types parsec syb text xml - ]; - testHaskellDepends = [ - base bytestring directory filepath process temporary text - utf8-string xml - ]; - description = "Conversion between formats used to represent mathematics"; - license = lib.licenses.gpl2Only; - }) {}; - - "texmath_0_12_3" = callPackage ({ mkDerivation, base, bytestring, containers, directory, filepath , mtl, pandoc-types, parsec, process, split, syb, temporary, text , utf8-string, xml @@ -257456,7 +258758,6 @@ self: { ]; description = "Conversion between formats used to represent mathematics"; license = lib.licenses.gpl2Only; - hydraPlatforms = lib.platforms.none; }) {}; "texrunner" = callPackage @@ -257740,8 +259041,8 @@ self: { }: mkDerivation { pname = "text-icu"; - version = "0.7.0.1"; - sha256 = "0y3z5jda7v2iyll2148ivxfd2yhp27d3ryxrspp0cdq394klqxp2"; + version = "0.7.1.0"; + sha256 = "0s9gcd9lcrhk92ydhizyk0vbpf542ipc4hj60fa02b2g2x9q93ij"; libraryHaskellDepends = [ base bytestring deepseq text ]; librarySystemDepends = [ icu ]; testHaskellDepends = [ @@ -258120,12 +259421,14 @@ self: { }: mkDerivation { pname = "text-replace"; - version = "0.0.0.6"; - sha256 = "05hr2185q4rcn1hvrrkqy2sbl8xzk7ij00x61vhvmyk29dbbk2cf"; + version = "0.1"; + sha256 = "0jzqq709r4jpbvgkix9ybi6asvhshl0ayz5a4gddrccli5k430n6"; isLibrary = true; isExecutable = true; - libraryHaskellDepends = [ base containers ]; - executableHaskellDepends = [ base optparse-applicative parsec ]; + libraryHaskellDepends = [ base containers text ]; + executableHaskellDepends = [ + base optparse-applicative parsec text + ]; testHaskellDepends = [ base hedgehog neat-interpolation text ]; description = "Simple text replacements from a list of search/replace pairs"; license = lib.licenses.asl20; @@ -258252,6 +259555,8 @@ self: { ]; description = "Library for Time parsing from Text into UTCTime"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "text-trie" = callPackage @@ -259120,8 +260425,8 @@ self: { pname = "th-test-utils"; version = "1.1.0"; sha256 = "12a8yp9wfl40afa3ps8jg3axcaah018pangjm0fzzga2awr1wzwk"; - revision = "1"; - editedCabalFile = "0q3x2gl9n22ww1wzlhgvgj8didnwjyk6frv92cs9i7zirrcfgvcw"; + revision = "2"; + editedCabalFile = "1jwx31jqglfcy6ylj4520kqfp918lnv6m13flx2qvhfwbd88xwcv"; libraryHaskellDepends = [ base template-haskell th-orphans transformers ]; @@ -259255,8 +260560,8 @@ self: { }: mkDerivation { pname = "themoviedb"; - version = "1.2.0.1"; - sha256 = "1n6raffsjn9iq427nyh7hnnx1jvgvilisfy6dz72hl4ry5198sdq"; + version = "1.2.1"; + sha256 = "0dd1f0lhq0sdl2i3cz7maf49vif89jlv6ny64pw4ywnwycblq3if"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -259273,6 +260578,8 @@ self: { ]; description = "Haskell API bindings for http://themoviedb.org"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "themplate" = callPackage @@ -259865,8 +261172,8 @@ self: { pname = "through-text"; version = "0.1.0.0"; sha256 = "1kdl36n98kajaa7v7js2sy8bi09p8rrxmlfcclcfc1l92bd2aclk"; - revision = "5"; - editedCabalFile = "1fdy2wyczl2jncy9gg0asasb8bybcnif8aqnw9fq73sr1778kjpf"; + revision = "6"; + editedCabalFile = "12mqlm77g0fymx3xwlkf6s9nqivcf78szhrzkvssi7lq1lqq9lbc"; libraryHaskellDepends = [ base bytestring case-insensitive text ]; description = "Convert textual types through Text without needing O(n^2) instances"; license = lib.licenses.bsd3; @@ -260102,8 +261409,8 @@ self: { }: mkDerivation { pname = "tidal"; - version = "1.7.4"; - sha256 = "080zncw6gp0dzwm9vd82c789v1x00nfzz8r1ldb4hl67v04jf8hi"; + version = "1.7.5"; + sha256 = "0mcq1sll148qfwkyad6y9k64zrlbkflzba9wqcgqydgfm0jyr7z7"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base bifunctors bytestring clock colour containers deepseq hosc @@ -260117,6 +261424,29 @@ self: { license = lib.licenses.gpl3Only; }) {}; + "tidal_1_7_7" = callPackage + ({ mkDerivation, base, bifunctors, bytestring, clock, colour + , containers, criterion, deepseq, hosc, microspec, network, parsec + , primitive, random, text, transformers, weigh + }: + mkDerivation { + pname = "tidal"; + version = "1.7.7"; + sha256 = "19r9h45yd2xwmah81xqmwx5bi5gi0x2hqhq2nqa47jgb0nd12a25"; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + base bifunctors bytestring clock colour containers deepseq hosc + network parsec primitive random text transformers + ]; + testHaskellDepends = [ + base containers deepseq hosc microspec parsec + ]; + benchmarkHaskellDepends = [ base criterion weigh ]; + description = "Pattern language for improvised music"; + license = lib.licenses.gpl3Only; + hydraPlatforms = lib.platforms.none; + }) {}; + "tidal-midi" = callPackage ({ mkDerivation, base, containers, PortMidi, tidal, time , transformers @@ -260327,14 +261657,14 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; - "time_1_11_1_2" = callPackage + "time_1_12" = callPackage ({ mkDerivation, base, criterion, deepseq, QuickCheck, random , tasty, tasty-hunit, tasty-quickcheck }: mkDerivation { pname = "time"; - version = "1.11.1.2"; - sha256 = "0r33rxxrrpyzxpdihky93adlpdj0r8k6wh2i1sx0nb7zhvfnfj27"; + version = "1.12"; + sha256 = "0xavlg1lsq0fip6mwvphr4xz2iykys4wsn468hr8qdg6xqab0x0b"; libraryHaskellDepends = [ base deepseq ]; testHaskellDepends = [ base deepseq QuickCheck random tasty tasty-hunit tasty-quickcheck @@ -260379,6 +261709,27 @@ self: { license = lib.licenses.bsd3; }) {}; + "time-compat_1_9_6" = callPackage + ({ mkDerivation, base, base-compat, base-orphans, deepseq, hashable + , HUnit, QuickCheck, tagged, tasty, tasty-hunit, tasty-quickcheck + , time + }: + mkDerivation { + pname = "time-compat"; + version = "1.9.6"; + sha256 = "0k466nyn7v8g3lx0gjfq6hzs4gmm4ws2wcm7xqyw48fmn55pb5rx"; + libraryHaskellDepends = [ + base base-orphans deepseq hashable time + ]; + testHaskellDepends = [ + base base-compat deepseq hashable HUnit QuickCheck tagged tasty + tasty-hunit tasty-quickcheck time + ]; + description = "Compatibility package for time"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + }) {}; + "time-extras" = callPackage ({ mkDerivation, base, time }: mkDerivation { @@ -261770,8 +263121,8 @@ self: { }: mkDerivation { pname = "tlynx"; - version = "0.5.0.2"; - sha256 = "1d28xk346h92imp6lnmy0g9mql8nd1zna1mnfs6mqhf38l8sm0k4"; + version = "0.5.1.1"; + sha256 = "1hp2j5yiki2li7h3097vkyis0an8aai1ng8dc0zv4d4dp4kmfvyx"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -261852,8 +263203,6 @@ self: { ]; description = "Start and stop a temporary postgres"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; - broken = true; }) {}; "tmpl" = callPackage @@ -262654,6 +264003,21 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; + "tophat" = callPackage + ({ mkDerivation, base, filepath, hspec, profunctors, text }: + mkDerivation { + pname = "tophat"; + version = "1.0.1.0"; + sha256 = "0q00lrv02pmy5zgnqciwaj87hs7daraj6pvcz9hm93djk6cgs5fn"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base profunctors text ]; + executableHaskellDepends = [ base filepath text ]; + testHaskellDepends = [ base hspec profunctors text ]; + description = "Template-to-Haskell preprocessor, and templating language"; + license = lib.licenses.gpl3Only; + }) {}; + "topkata" = callPackage ({ mkDerivation, ALUT, array, base, filepath, GLFW-b, OpenAL , OpenGL, parseargs, random @@ -263158,8 +264522,8 @@ self: { }: mkDerivation { pname = "tracing"; - version = "0.0.6.2"; - sha256 = "0fabwv87b9r8khyk8gr769j6k3wqddrgzh86inx0xjx9swgdrr6q"; + version = "0.0.7.0"; + sha256 = "0mm2s367n7zggnbgcvhffjin47pfyzr76ywg60vhfjcb1zzmkv4l"; libraryHaskellDepends = [ aeson base base16-bytestring bytestring case-insensitive containers http-client mtl network random stm text time transformers unliftio @@ -263994,6 +265358,21 @@ self: { license = lib.licenses.mit; }) {}; + "traverse-with-class_1_0_1_1" = callPackage + ({ mkDerivation, base, tasty, tasty-hunit, template-haskell + , transformers + }: + mkDerivation { + pname = "traverse-with-class"; + version = "1.0.1.1"; + sha256 = "0c0h902hr3gnlmlvqjhz3k5abyg0ays2g2c1kwrhbz0nhgfwk656"; + libraryHaskellDepends = [ base template-haskell transformers ]; + testHaskellDepends = [ base tasty tasty-hunit ]; + description = "Generic applicative traversals"; + license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + }) {}; + "travis" = callPackage ({ mkDerivation, aeson, base, bytestring, http-conduit , transformers @@ -264154,6 +265533,8 @@ self: { pname = "tree-monad"; version = "0.3.1"; sha256 = "0ny57rygkgwn8i733gz2zb12i5niq5q7lrqvzfwsnjd0b40yighf"; + revision = "1"; + editedCabalFile = "0pw6mzr6x3s5w01bv6b5pcrqkx2zbjf4bk4cgrzww9gs81p3v790"; libraryHaskellDepends = [ base ]; description = "Non-Determinism Monad for Tree Search"; license = lib.licenses.bsd3; @@ -265176,8 +266557,8 @@ self: { }: mkDerivation { pname = "ttc"; - version = "0.4.0.0"; - sha256 = "07b5vw7wxgxcsr04h4nx28bmv9a10hkdzhhssvka050hxhiyjmgv"; + version = "1.1.0.0"; + sha256 = "02b55f0dwgxvpr8x2727ryb6zhvz73l6l001szm4i821q0p4h00g"; libraryHaskellDepends = [ base bytestring template-haskell text ]; testHaskellDepends = [ base bytestring tasty tasty-hunit template-haskell text @@ -266578,8 +267959,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "type-fun"; - version = "0.1.2"; - sha256 = "1qb9h6x1npq1pc8h7n6ism5a6jccysn76czqym1f69x0qh1jjlay"; + version = "0.1.3"; + sha256 = "0br31kghd0hm2qaz14pm6lxbl2z1ci3c0758qfpiq1dmm9mmc4ir"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base ]; description = "Collection of widely reimplemented type families"; @@ -267281,6 +268662,20 @@ self: { hydraPlatforms = lib.platforms.none; }) {}; + "typed-time" = callPackage + ({ mkDerivation, base, hspec, hspec-core, time }: + mkDerivation { + pname = "typed-time"; + version = "0.1.0.0"; + sha256 = "0fk8zb198i5xfwrc820br8hh1nfcqcrzyzkyf0srijjf88m92y27"; + libraryHaskellDepends = [ base time ]; + testHaskellDepends = [ base hspec hspec-core time ]; + description = "A strongly typed way to handle time and date formats"; + license = lib.licenses.isc; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "typed-uuid" = callPackage ({ mkDerivation, aeson, base, binary, bytestring, deepseq, hashable , http-api-data, random, text, uuid, validity, validity-uuid @@ -267558,17 +268953,18 @@ self: { "typesafe-precure" = callPackage ({ mkDerivation, aeson, aeson-pretty, autoexporter, base , bytestring, dlist, hspec, monad-skeleton, template-haskell, text - , th-data-compat, th-strict-compat, th-utilities + , th-data-compat, th-strict-compat }: mkDerivation { pname = "typesafe-precure"; - version = "0.7.11.1"; - sha256 = "1kbxj35dr41rg1s38f9dv2bg2d0rrwj1g2154ggfpx6kwy758jg6"; + version = "0.8.0.1"; + sha256 = "05rsyiksmw3gilr944hr1q12alinsy842qwzvc444iwyvc4f0i17"; libraryHaskellDepends = [ aeson aeson-pretty autoexporter base bytestring dlist monad-skeleton template-haskell text th-data-compat - th-strict-compat th-utilities + th-strict-compat ]; + libraryToolDepends = [ autoexporter ]; testHaskellDepends = [ base hspec ]; description = "Type-safe transformations and purifications of PreCures (Japanese Battle Heroine)"; license = lib.licenses.bsd3; @@ -268999,17 +270395,17 @@ self: { }) {}; "unicode-tricks" = callPackage - ({ mkDerivation, base, containers, data-default, hspec - , hspec-discover, QuickCheck, text + ({ mkDerivation, base, containers, data-default, deepseq, hashable + , hspec, hspec-discover, QuickCheck, text }: mkDerivation { pname = "unicode-tricks"; - version = "0.9.1.0"; - sha256 = "1jqljawh6xvavp9g8mjlw4pkiagd59yybbizr9vcg70dd8pnanv2"; + version = "0.11.0.0"; + sha256 = "0f1r8s69if5hjqy1p13b30f8wnbc52sya4zdcw3krwvmizwqq3dh"; libraryHaskellDepends = [ - base containers data-default QuickCheck text + base containers data-default deepseq hashable QuickCheck text ]; - testHaskellDepends = [ base hspec QuickCheck ]; + testHaskellDepends = [ base hashable hspec QuickCheck ]; testToolDepends = [ hspec-discover ]; description = "Functions to work with unicode blocks more convenient"; license = lib.licenses.bsd3; @@ -269205,8 +270601,8 @@ self: { pname = "union"; version = "0.1.2"; sha256 = "1i4fvlwkw1wx64a6l8342aqfqsdq7fqa4p24g3i5gn5704lxrsb3"; - revision = "5"; - editedCabalFile = "1qxwx43ba4ixq6g78y6gs4zqq4v2ka0qi79gpvny9qw577gwbbd3"; + revision = "6"; + editedCabalFile = "1n1innjiqksancaazsczryyjfr7905q1iq9radwqq5ngl8xi83wz"; libraryHaskellDepends = [ base deepseq hashable profunctors tagged vinyl ]; @@ -269215,6 +270611,18 @@ self: { license = lib.licenses.bsd3; }) {}; + "union-angle" = callPackage + ({ mkDerivation, base }: + mkDerivation { + pname = "union-angle"; + version = "0.1.0.1"; + sha256 = "0scvzln05l2y4pb96cy7908aw433v8ln4nc17fp5x2vlz579w9cl"; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ base ]; + description = "Union type that include radian angle and degree angle"; + license = lib.licenses.bsd3; + }) {}; + "union-find" = callPackage ({ mkDerivation, base, containers, transformers }: mkDerivation { @@ -269606,8 +271014,8 @@ self: { }: mkDerivation { pname = "units-parser"; - version = "0.1.1.3"; - sha256 = "0lyy8nh86b0nq2znkli8y1zcg87l6acaaxi8b1m6falb6xnfi0nw"; + version = "0.1.1.4"; + sha256 = "1sdf8jqq03x20gj91faqir9vrdjq7cxpnypx7bi953vjg8fh2jfm"; libraryHaskellDepends = [ base containers mtl multimap parsec ]; testHaskellDepends = [ base containers mtl multimap parsec syb tasty tasty-hunit @@ -270144,8 +271552,8 @@ self: { }: mkDerivation { pname = "unliftio"; - version = "0.2.16"; - sha256 = "1zawfyjr8immg5sqvwknwqp3xym0acjhlqm0y6xs63wjvp72wb3r"; + version = "0.2.18"; + sha256 = "0yg5x2v3p4pdw7892l1mkihmdbak14qvmni1vk2a0y2gdmxfvx1y"; libraryHaskellDepends = [ async base bytestring deepseq directory filepath process stm time transformers unix unliftio-core @@ -270300,8 +271708,8 @@ self: { }: mkDerivation { pname = "unordered-containers"; - version = "0.2.13.0"; - sha256 = "0mbvld5dym17jc13ycl862k73kg26y9khb8578w13cwfmdli7c46"; + version = "0.2.14.0"; + sha256 = "0rw8kmg7xjlacmr1hcpin95abkd387awf154s9ran7zg9jllh3x1"; libraryHaskellDepends = [ base deepseq hashable ]; testHaskellDepends = [ base ChasingBottoms containers hashable HUnit QuickCheck random @@ -270445,6 +271853,7 @@ self: { description = "maybes of numeric values with fewer indirections"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "unpacked-maybe-text" = callPackage @@ -270576,6 +271985,19 @@ self: { license = lib.licenses.bsd3; }) {}; + "unsatisfiable" = callPackage + ({ mkDerivation, base, ghc }: + mkDerivation { + pname = "unsatisfiable"; + version = "0"; + sha256 = "0cvlqrrr31dn2agd7cz2s5gnf2m1yy21kwmymcpdg5zk34dc19wh"; + libraryHaskellDepends = [ base ghc ]; + description = "Unsatisfiable type class"; + license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; + }) {}; + "unscramble" = callPackage ({ mkDerivation, array, base, optparse-applicative, stream-fusion , unordered-containers @@ -270740,8 +272162,8 @@ self: { }: mkDerivation { pname = "update-nix-fetchgit"; - version = "0.2.5"; - sha256 = "0lga69cnzysayvsflbcf43i7ncnib9mq62azi30kpm860s0h5lfb"; + version = "0.2.7"; + sha256 = "0knwn11c3kdh1xbpa8l6kgskis9fcsjr06hxay3rl4yiqprf80xn"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -271160,7 +272582,6 @@ self: { ]; description = "Memory efficient url type and parser"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "url-decoders" = callPackage @@ -271283,7 +272704,6 @@ self: { ]; description = "Painfully simple URL deployment"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "urn" = callPackage @@ -272060,7 +273480,6 @@ self: { ]; description = "UUID parsing using byteverse packages"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "uuid-crypto" = callPackage @@ -272101,6 +273520,8 @@ self: { pname = "uuid-orphans"; version = "1.4.5"; sha256 = "14d7gyf3sa2874r0dhj3ydvmb1iz174kp4pxz7aq984zb4m6d87z"; + revision = "2"; + editedCabalFile = "1202zn5f70f1yvmaknm8l34igg9ihyqs8lhch4ihvx9vcqxs3c0v"; libraryHaskellDepends = [ base safecopy text th-lift uuid-types web-routes ]; @@ -272154,24 +273575,19 @@ self: { }) {}; "uusi" = callPackage - ({ mkDerivation, base, Cabal, directory, filepath, HUnit, microlens - , microlens-th, text - }: + ({ mkDerivation, base, Cabal, directory, filepath, HUnit, text }: mkDerivation { pname = "uusi"; - version = "0.4.0.0"; - sha256 = "03spazp0lpd2impvg9i6fdd32v3fzycgqr95ry2jwvaxijqhfic9"; + version = "0.4.2.0"; + sha256 = "0c7zcx594cnfng9sszm70fcfi81n7j54vvk32mvp8j52d7f812cb"; isLibrary = true; isExecutable = true; - libraryHaskellDepends = [ base Cabal microlens microlens-th text ]; - executableHaskellDepends = [ - base Cabal directory filepath microlens microlens-th text - ]; - testHaskellDepends = [ - base Cabal HUnit microlens microlens-th text - ]; + libraryHaskellDepends = [ base Cabal text ]; + executableHaskellDepends = [ base Cabal directory filepath text ]; + testHaskellDepends = [ base Cabal HUnit text ]; description = "Tweak .cabal files"; license = lib.licenses.mit; + maintainers = with lib.maintainers; [ berberman ]; }) {}; "uvector" = callPackage @@ -272576,6 +273992,19 @@ self: { license = lib.licenses.mit; }) {}; + "validity_0_11_0_1" = callPackage + ({ mkDerivation, base, hspec }: + mkDerivation { + pname = "validity"; + version = "0.11.0.1"; + sha256 = "086nj5ymp4mxxfw9qjgjhd4j3z7gl2y9d89p0b7bkap5ampgdw2x"; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ base hspec ]; + description = "Validity typeclass"; + license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + }) {}; + "validity-aeson" = callPackage ({ mkDerivation, aeson, base, hspec, validity, validity-scientific , validity-text, validity-unordered-containers, validity-vector @@ -273960,8 +275389,8 @@ self: { }: mkDerivation { pname = "verifiable-expressions"; - version = "0.6.1"; - sha256 = "0s3615m849xj0df6ia18kg4i54z87x3c6yxgv594dwf9mf9dw4x8"; + version = "0.6.2"; + sha256 = "1nrlcbimng6qf4g7h4hxg3j05kd0hlihkhp8hj5js44n29vg89qk"; libraryHaskellDepends = [ base containers lens mtl sbv transformers union vinyl ]; @@ -274084,26 +275513,6 @@ self: { }) {}; "versions" = callPackage - ({ mkDerivation, base, deepseq, hashable, megaparsec, microlens - , parser-combinators, QuickCheck, tasty, tasty-hunit - , tasty-quickcheck, text - }: - mkDerivation { - pname = "versions"; - version = "4.0.3"; - sha256 = "0rp62aih4blpahymqlkrfzywdqb1mkhy6f021vp74ljknpch4scf"; - libraryHaskellDepends = [ - base deepseq hashable megaparsec parser-combinators text - ]; - testHaskellDepends = [ - base megaparsec microlens QuickCheck tasty tasty-hunit - tasty-quickcheck text - ]; - description = "Types and parsers for software version numbers"; - license = lib.licenses.bsd3; - }) {}; - - "versions_5_0_0" = callPackage ({ mkDerivation, base, deepseq, hashable, megaparsec, microlens , parser-combinators, QuickCheck, tasty, tasty-hunit , tasty-quickcheck, text @@ -274121,7 +275530,6 @@ self: { ]; description = "Types and parsers for software version numbers"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "vflow-types" = callPackage @@ -274397,8 +275805,8 @@ self: { }: mkDerivation { pname = "vimeta"; - version = "0.3.0.1"; - sha256 = "0i834y50b4820109asrzp61bqprxs9rfgr9b8310zhsisrlbxgl3"; + version = "0.3.1"; + sha256 = "1q40cny80lf0yb38ahmpz42k0w6646mscajlny8zxb6rwylvscv9"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -274413,6 +275821,7 @@ self: { ]; description = "Frontend for video metadata tagging tools"; license = lib.licenses.bsd2; + hydraPlatforms = lib.platforms.none; }) {}; "vimus" = callPackage @@ -274476,8 +275885,8 @@ self: { }: mkDerivation { pname = "vinyl"; - version = "0.13.2"; - sha256 = "1ymrh8ra54a2x3kmw87gfcrv413rbr4msy0ppppi6lh2lvq5zk09"; + version = "0.13.3"; + sha256 = "0mlk94n3s4ah8y9w9vcrk1n7gnsm19d1iijk9da4219dwrkaax2l"; libraryHaskellDepends = [ array base deepseq ghc-prim ]; testHaskellDepends = [ aeson base hspec lens lens-aeson microlens mtl should-not-typecheck @@ -275261,8 +276670,8 @@ self: { ({ mkDerivation, base, bytestring, transformers, vector, vulkan }: mkDerivation { pname = "vulkan"; - version = "3.10.1"; - sha256 = "0lk4l65qvq1b3dz9fkz981zgm2m9nx38ylccnsxcgxns2s2zx9b3"; + version = "3.11"; + sha256 = "0kpnchaidl555zr5k166kmxnb8kiablnwjhi2gb665v64shj3k2k"; libraryHaskellDepends = [ base bytestring transformers vector ]; libraryPkgconfigDepends = [ vulkan ]; description = "Bindings to the Vulkan graphics API"; @@ -275290,8 +276699,8 @@ self: { }: mkDerivation { pname = "vulkan-utils"; - version = "0.5.0"; - sha256 = "11pcxa7pjhdrfcxl058dn909ar6sv9kn34g73w8jqa60d2savj6q"; + version = "0.5.0.2"; + sha256 = "19jxd73li1ybdfzznlql2im8k0qad1yas75d5cdfvjazv7x4g3n1"; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ base bytestring containers dependent-map dependent-sum extra @@ -276134,8 +277543,8 @@ self: { }: mkDerivation { pname = "wai-middleware-auth"; - version = "0.2.4.1"; - sha256 = "1q8vj3ri5fvdhlwls7az4zcwk7iyc3fi4yf968086pkg92hpzcdl"; + version = "0.2.5.0"; + sha256 = "12yv8rcybd7saflfcyjy08p1m6il07nk831pkj0isxk8mwjq64l4"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -276363,7 +277772,6 @@ self: { ]; description = "Route to different middlewares based on the incoming Accept header"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "wai-middleware-crowd" = callPackage @@ -277471,35 +278879,69 @@ self: { ({ mkDerivation, array, async, auto-update, base, bsb-http-chunked , bytestring, case-insensitive, containers, directory, gauge , ghc-prim, hashable, hspec, http-client, http-date, http-types - , http2, HUnit, iproute, lifted-base, network, process, QuickCheck + , http2, HUnit, iproute, network, process, QuickCheck , simple-sendfile, stm, streaming-commons, text, time, time-manager - , unix, unix-compat, vault, wai, word8, x509 + , unix, unix-compat, unliftio, vault, wai, word8, x509 }: mkDerivation { pname = "warp"; - version = "3.3.15"; - sha256 = "0nj4xxzjcy33hyfdagpc2ij6ga71r1fmc248rjgwsyfflial63bz"; + version = "3.3.16"; + sha256 = "1qnngw7afh448hv7fzp4l36j7hz6f8a8f1qga976j8l53qhmgcf1"; libraryHaskellDepends = [ - array async auto-update base bsb-http-chunked bytestring - case-insensitive containers ghc-prim hashable http-date http-types - http2 iproute network simple-sendfile stm streaming-commons text - time-manager unix unix-compat vault wai word8 x509 + array auto-update base bsb-http-chunked bytestring case-insensitive + containers ghc-prim hashable http-date http-types http2 iproute + network simple-sendfile stm streaming-commons text time-manager + unix unix-compat unliftio vault wai word8 x509 ]; testHaskellDepends = [ array async auto-update base bsb-http-chunked bytestring case-insensitive containers directory ghc-prim hashable hspec - http-client http-date http-types http2 HUnit iproute lifted-base - network process QuickCheck simple-sendfile stm streaming-commons - text time time-manager unix unix-compat vault wai word8 x509 + http-client http-date http-types http2 HUnit iproute network + process QuickCheck simple-sendfile stm streaming-commons text time + time-manager unix unix-compat unliftio vault wai word8 x509 ]; benchmarkHaskellDepends = [ auto-update base bytestring containers gauge hashable http-date - http-types network time-manager unix unix-compat x509 + http-types network time-manager unix unix-compat unliftio x509 ]; description = "A fast, light-weight web server for WAI applications"; license = lib.licenses.mit; }) {}; + "warp_3_3_17" = callPackage + ({ mkDerivation, array, async, auto-update, base, bsb-http-chunked + , bytestring, case-insensitive, containers, directory, gauge + , ghc-prim, hashable, hspec, http-client, http-date, http-types + , http2, HUnit, iproute, network, process, QuickCheck + , simple-sendfile, stm, streaming-commons, text, time, time-manager + , unix, unix-compat, unliftio, vault, wai, word8, x509 + }: + mkDerivation { + pname = "warp"; + version = "3.3.17"; + sha256 = "0v54ca3wpa79gdyiikwhbv9h8b5vr3d60piq3ndb2v7s7fi1qpm0"; + libraryHaskellDepends = [ + array auto-update base bsb-http-chunked bytestring case-insensitive + containers ghc-prim hashable http-date http-types http2 iproute + network simple-sendfile stm streaming-commons text time-manager + unix unix-compat unliftio vault wai word8 x509 + ]; + testHaskellDepends = [ + array async auto-update base bsb-http-chunked bytestring + case-insensitive containers directory ghc-prim hashable hspec + http-client http-date http-types http2 HUnit iproute network + process QuickCheck simple-sendfile stm streaming-commons text time + time-manager unix unix-compat unliftio vault wai word8 x509 + ]; + benchmarkHaskellDepends = [ + auto-update base bytestring containers gauge hashable http-date + http-types network time-manager unix unix-compat unliftio x509 + ]; + description = "A fast, light-weight web server for WAI applications"; + license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + }) {}; + "warp-dynamic" = callPackage ({ mkDerivation, base, data-default, dyre, http-types, wai, warp }: mkDerivation { @@ -277574,15 +279016,16 @@ self: { "warp-tls" = callPackage ({ mkDerivation, base, bytestring, cryptonite, data-default-class - , network, streaming-commons, tls, tls-session-manager, wai, warp + , network, streaming-commons, tls, tls-session-manager, unliftio + , wai, warp }: mkDerivation { pname = "warp-tls"; - version = "3.3.0"; - sha256 = "03fwwggl6lhxs7swwylgpk9j8g5szq2h871nfbgs6xzr1b5hpas1"; + version = "3.3.1"; + sha256 = "1k8f3r0l36mgwm69fikprv6pyjzj15702kq25dr9nc3sv5lcs162"; libraryHaskellDepends = [ base bytestring cryptonite data-default-class network - streaming-commons tls tls-session-manager wai warp + streaming-commons tls tls-session-manager unliftio wai warp ]; description = "HTTP over TLS support for Warp via the TLS package"; license = lib.licenses.mit; @@ -278392,6 +279835,8 @@ self: { ]; description = "A super-simple web server framework"; license = lib.licenses.asl20; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "webcloud" = callPackage @@ -278794,8 +280239,8 @@ self: { ({ mkDerivation, base, Cabal, gtk2hs-buildtools, webkitgtk }: mkDerivation { pname = "webkit2gtk3-javascriptcore"; - version = "0.14.4.1"; - sha256 = "0bi42gpw0cf5ymnwlffnfdq68jfvk0j4qcnqv8lvwz2vp1ngs23j"; + version = "0.14.4.2"; + sha256 = "1l77qh9iyrcvsf0kha9vcm1v6fayk5i71qprdzbvfp5sihbcnz3r"; setupHaskellDepends = [ base Cabal gtk2hs-buildtools ]; libraryHaskellDepends = [ base ]; libraryPkgconfigDepends = [ webkitgtk ]; @@ -278871,10 +280316,8 @@ self: { }: mkDerivation { pname = "webp"; - version = "0.1.0.0"; - sha256 = "153icv3911drnjkii2b0csdq3ksavmxpz26zm9xcp24kfbsr6gvk"; - revision = "2"; - editedCabalFile = "0ycp16b2fb4x3h6rs4j2wywy7la1b7ri3419p8mnpf1ipmq6d1vk"; + version = "0.1.0.1"; + sha256 = "12ryx87z36ra243vcira7jkpn6k3c5sqp5r4h7zvxxm64rajyxcd"; libraryHaskellDepends = [ base bytestring JuicyPixels vector ]; libraryPkgconfigDepends = [ libwebp ]; libraryToolDepends = [ c2hs ]; @@ -279324,19 +280767,20 @@ self: { "what4" = callPackage ({ mkDerivation, attoparsec, base, bifunctors, bimap, bv-sized - , bytestring, config-value, containers, data-binary-ieee754 - , deepseq, deriving-compat, directory, exceptions, extra, filepath - , fingertree, ghc-prim, hashable, hashtables, hedgehog, io-streams - , lens, libBF, mtl, panic, parameterized-utils, prettyprinter - , process, QuickCheck, scientific, tasty, tasty-hedgehog - , tasty-hunit, tasty-quickcheck, template-haskell, temporary, text + , bytestring, config-value, containers, contravariant + , data-binary-ieee754, deepseq, deriving-compat, directory + , exceptions, extra, filepath, fingertree, ghc-prim, hashable + , hashtables, hedgehog, io-streams, lens, libBF, lumberjack, mtl + , panic, parameterized-utils, prettyprinter, process, QuickCheck + , scientific, tasty, tasty-checklist, tasty-hedgehog, tasty-hunit + , tasty-quickcheck, tasty-sugar, template-haskell, temporary, text , th-abstraction, th-lift, th-lift-instances, transformers , unordered-containers, utf8-string, vector, versions, zenc }: mkDerivation { pname = "what4"; - version = "1.1"; - sha256 = "1656h3865vzd96ggibm1wkhnpmjrx6crv87kgmwphfy8hgl5j8kq"; + version = "1.2.1"; + sha256 = "0cbvdiszqzhw50m51kfm0qsadq04dxwb8836hibv61sshgckpsf3"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -279351,9 +280795,11 @@ self: { ]; executableHaskellDepends = [ base parameterized-utils ]; testHaskellDepends = [ - base bv-sized bytestring containers data-binary-ieee754 hedgehog - libBF parameterized-utils QuickCheck tasty tasty-hedgehog - tasty-hunit tasty-quickcheck text transformers versions + base bv-sized bytestring containers contravariant + data-binary-ieee754 exceptions hedgehog io-streams libBF lumberjack + parameterized-utils prettyprinter QuickCheck tasty tasty-checklist + tasty-hedgehog tasty-hunit tasty-quickcheck tasty-sugar text + transformers versions ]; description = "Solver-agnostic symbolic values support for issuing queries"; license = lib.licenses.bsd3; @@ -279527,8 +280973,8 @@ self: { pname = "wide-word"; version = "0.1.1.2"; sha256 = "10sj7nca2sba74bkiicnp95xrfq2j1al93ggw3z24982nm9x3j8r"; - revision = "1"; - editedCabalFile = "1gqw8d8j3wml0431lq1ygl5a3n36ymp1i77m7qaw0mz3ss982gl2"; + revision = "2"; + editedCabalFile = "09nr9ni9vs38ldzrx3vmlm6dr2avmwx6p9wlaml0nhr6sh4lbjsr"; libraryHaskellDepends = [ base deepseq primitive ]; testHaskellDepends = [ base bytestring ghc-prim hedgehog primitive QuickCheck @@ -279536,8 +280982,6 @@ self: { ]; description = "Data types for large but fixed width signed and unsigned integers"; license = lib.licenses.bsd2; - hydraPlatforms = lib.platforms.none; - broken = true; }) {}; "wide-word-instances" = callPackage @@ -279549,7 +280993,6 @@ self: { libraryHaskellDepends = [ base binary serialise wide-word ]; description = "Instances for wide-word"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "wigner-symbols" = callPackage @@ -279679,8 +281122,8 @@ self: { }: mkDerivation { pname = "wild-bind-x11"; - version = "0.2.0.12"; - sha256 = "1zpb448pj586xvh0l9qp08hvbjw1lphxwzi4srnghmsbnfnkvhh6"; + version = "0.2.0.13"; + sha256 = "0fs8k2kfzm6qq9xy35278xprgq7vf0v4qz7q0gz8qv480hffccc5"; libraryHaskellDepends = [ base containers fold-debounce mtl semigroups stm text transformers wild-bind X11 @@ -279920,18 +281363,18 @@ self: { }) {}; "witch" = callPackage - ({ mkDerivation, base, bytestring, containers, hspec + ({ mkDerivation, base, bytestring, containers, HUnit , template-haskell, text, time }: mkDerivation { pname = "witch"; - version = "0.3.1.0"; - sha256 = "1jk0p1w5a3nr12nn6afwagpgkv1i6pyn83idkbps6kq3kb3l15w4"; + version = "0.3.3.0"; + sha256 = "0wckjjy7yxq899f515xhwl2izqmrr9zck0kjlgz6qfa1fsl6lbvx"; libraryHaskellDepends = [ base bytestring containers template-haskell text time ]; testHaskellDepends = [ - base bytestring containers hspec text time + base bytestring containers HUnit text time ]; description = "Convert values from one type into another"; license = lib.licenses.isc; @@ -280665,8 +282108,8 @@ self: { }: mkDerivation { pname = "wordpress-auth"; - version = "1.0.0.0"; - sha256 = "150rri8lrl6j3f9q7wc34ajg06rakgk8a5npzz7vdap64994wy5c"; + version = "1.0.0.1"; + sha256 = "10drplm0bg72ph87apbdmm4ar7gh09x6w6sgwgvdkz4zpkc48s0j"; libraryHaskellDepends = [ base base16-bytestring bytestring cookie cryptohash-md5 cryptohash-sha256 hs-php-session http-types mtl text time @@ -281347,7 +282790,6 @@ self: { ]; description = "A simple CLI utility for interacting with a websocket"; license = lib.licenses.bsd3; - hydraPlatforms = lib.platforms.none; }) {}; "ws-chans" = callPackage @@ -282583,6 +284025,35 @@ self: { license = lib.licenses.mit; }) {}; + "xlsx_0_8_4" = callPackage + ({ mkDerivation, attoparsec, base, base64-bytestring, binary-search + , bytestring, conduit, containers, criterion, data-default, deepseq + , Diff, errors, extra, filepath, groom, lens, mtl, network-uri + , old-locale, raw-strings-qq, safe, smallcheck, tasty, tasty-hunit + , tasty-smallcheck, text, time, transformers, vector, xeno + , xml-conduit, zip-archive, zlib + }: + mkDerivation { + pname = "xlsx"; + version = "0.8.4"; + sha256 = "0xmz9qpqyz2gwlrjsy2m79s4xswb6lz7fbvybd4awg5vy0y6pl41"; + libraryHaskellDepends = [ + attoparsec base base64-bytestring binary-search bytestring conduit + containers data-default deepseq errors extra filepath lens mtl + network-uri old-locale safe text time transformers vector xeno + xml-conduit zip-archive zlib + ]; + testHaskellDepends = [ + base bytestring containers Diff groom lens mtl raw-strings-qq + smallcheck tasty tasty-hunit tasty-smallcheck text time vector + xml-conduit + ]; + benchmarkHaskellDepends = [ base bytestring criterion ]; + description = "Simple and incomplete Excel file parser/writer"; + license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + }) {}; + "xlsx-tabular" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, data-default , lens, text, xlsx @@ -283085,12 +284556,12 @@ self: { }) {}; "xml-query" = callPackage - ({ mkDerivation, base-prelude, free, text }: + ({ mkDerivation, base, free, text }: mkDerivation { pname = "xml-query"; - version = "0.9.1"; - sha256 = "16wszpvz8cp8nx18rmgyjy6mqk9awd3yf9w0is5rw77r73w88nwq"; - libraryHaskellDepends = [ base-prelude free text ]; + version = "0.9.1.1"; + sha256 = "1rrzba94098rw7gmripz62awc5cscrx4lqavzd946h6vpy4ps4ba"; + libraryHaskellDepends = [ base free text ]; description = "A parser-agnostic declarative API for querying XML-documents"; license = lib.licenses.mit; hydraPlatforms = lib.platforms.none; @@ -283499,6 +284970,8 @@ self: { pname = "xmonad"; version = "0.15"; sha256 = "0a7rh21k9y6g8fwkggxdxjns2grvvsd5hi2ls4klmqz5xvk4hyaa"; + revision = "1"; + editedCabalFile = "0yqh96qqphllr0zyz5j93cij5w2qvf39xxnrb52pz0qz3pywz9wd"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -283549,6 +285022,8 @@ self: { pname = "xmonad-contrib"; version = "0.16"; sha256 = "1pddgkvnbww28wykncc7j0yb0lv15bk7xnnhdcbrwkxzw66w6wmd"; + revision = "1"; + editedCabalFile = "0vimkby2gq6sgzxzbvz67caba609xqlv2ii2gi8a1cjrnn6ib011"; libraryHaskellDepends = [ base bytestring containers directory extensible-exceptions filepath mtl old-locale old-time process random semigroups unix utf8-string @@ -283747,15 +285222,11 @@ self: { ({ mkDerivation, base, magic, mtl, random, unix, xmonad }: mkDerivation { pname = "xmonad-wallpaper"; - version = "0.0.1.4"; - sha256 = "0f6214kqp86xnk1zginjiprnqlj2fzcvh3w5sv3yvqg98mwdd0cg"; - revision = "1"; - editedCabalFile = "1vxgv702wgr0k0kzd602v8xv11q5dap4mfhqifnr928bwf9scp28"; + version = "0.0.1.5"; + sha256 = "1habj1q0m98vnq24vsya5rzrvkhglkwa90fr85glmh9h6gcqywgq"; libraryHaskellDepends = [ base magic mtl random unix xmonad ]; description = "xmonad wallpaper extension"; license = lib.licenses.lgpl3Only; - hydraPlatforms = lib.platforms.none; - broken = true; }) {}; "xmonad-windownames" = callPackage @@ -284443,6 +285914,8 @@ self: { ]; description = "Yam App"; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "yam-config" = callPackage @@ -284489,6 +285962,7 @@ self: { sha256 = "0c6frqjf3xhd5bksaz6rvd6qbqbj15y441476dgj2asm2yd64895"; libraryHaskellDepends = [ base cron yam-app ]; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "yam-logger" = callPackage @@ -284588,6 +286062,7 @@ self: { base containers persistent-postgresql unliftio-core yam-app ]; license = lib.licenses.bsd3; + hydraPlatforms = lib.platforms.none; }) {}; "yam-web" = callPackage @@ -284832,8 +286307,8 @@ self: { }: mkDerivation { pname = "yaml-unscrambler"; - version = "0.1.0.1"; - sha256 = "05z892g8c9alwmjwjm1405s43s8cdbj42ymqc9jlb27qc8ikc4n7"; + version = "0.1.0.2"; + sha256 = "03wvb5skx41kdmdc6zhydr7zddzyshy2cgk8zmwy26q70z3g01zf"; libraryHaskellDepends = [ acc attoparsec attoparsec-data attoparsec-time base base64 bytestring conduit containers foldl hashable libyaml mtl scientific @@ -284893,8 +286368,8 @@ self: { }: mkDerivation { pname = "yamlparse-applicative"; - version = "0.1.0.3"; - sha256 = "14fp7qyfh9ax2cqp5amvj2hi8fl9imdq25j8bx5mil8f2jxqr6bi"; + version = "0.2.0.0"; + sha256 = "1c287mc7rl6xhwsb3gw51m6sx29dz88a9b6qa0b324hgcmf086sk"; libraryHaskellDepends = [ aeson base bytestring containers optparse-applicative path path-io prettyprinter safe-coloured-text scientific text @@ -285794,8 +287269,8 @@ self: { }: mkDerivation { pname = "yesod-auth-hashdb"; - version = "1.7.1.6"; - sha256 = "062f2fv4ixr5bd5xcs208xfg2i18z25g3imf86qrziv0yxxg5qpc"; + version = "1.7.1.7"; + sha256 = "1daibkn5qhw131pp0sfyahyicwlgpin90zkcrwr2qk05ms5j3hj5"; libraryHaskellDepends = [ aeson base bytestring persistent text yesod-auth yesod-core yesod-form yesod-persistent @@ -286036,6 +287511,25 @@ self: { broken = true; }) {}; + "yesod-autoreload" = callPackage + ({ mkDerivation, base, shakespeare, text, yesod-core + , yesod-websockets + }: + mkDerivation { + pname = "yesod-autoreload"; + version = "0.0.0.0"; + sha256 = "1dzig02l00hw9xz974pf923yr6045x45sw8nnhnqw8rd67r2l7d3"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base shakespeare text yesod-core yesod-websockets + ]; + executableHaskellDepends = [ base yesod-core ]; + testHaskellDepends = [ base ]; + description = "Auto-reload a yesod app during development"; + license = lib.licenses.mit; + }) {}; + "yesod-bin" = callPackage ({ mkDerivation, base, bytestring, Cabal, conduit, conduit-extra , containers, data-default-class, directory, file-embed, filepath @@ -286175,8 +287669,8 @@ self: { }: mkDerivation { pname = "yesod-core"; - version = "1.6.20"; - sha256 = "1f3imbd22i9vl30760063p308byddwxafpl5hdric2z7vmnxayqy"; + version = "1.6.20.1"; + sha256 = "1y24sn30fm7bjq9rfv4lclz3vraaac9qbd2xgz949agm2irjwg4p"; libraryHaskellDepends = [ aeson auto-update base blaze-html blaze-markup bytestring case-insensitive cereal clientsession conduit conduit-extra @@ -286460,28 +287954,6 @@ self: { }) {}; "yesod-form" = callPackage - ({ mkDerivation, aeson, attoparsec, base, blaze-builder, blaze-html - , blaze-markup, byteable, bytestring, containers, data-default - , email-validate, hspec, network-uri, persistent, resourcet - , semigroups, shakespeare, text, time, transformers, wai - , xss-sanitize, yesod-core, yesod-persistent - }: - mkDerivation { - pname = "yesod-form"; - version = "1.6.7"; - sha256 = "0mny71dyp6cp5akyp5wvmrhmip5rkqi8ibdn3lipvmajx9h58r5d"; - libraryHaskellDepends = [ - aeson attoparsec base blaze-builder blaze-html blaze-markup - byteable bytestring containers data-default email-validate - network-uri persistent resourcet semigroups shakespeare text time - transformers wai xss-sanitize yesod-core yesod-persistent - ]; - testHaskellDepends = [ base hspec text time ]; - description = "Form handling support for Yesod Web Framework"; - license = lib.licenses.mit; - }) {}; - - "yesod-form_1_7_0" = callPackage ({ mkDerivation, aeson, attoparsec, base, blaze-builder, blaze-html , blaze-markup, byteable, bytestring, containers, data-default , email-validate, hspec, network-uri, persistent, resourcet @@ -286501,7 +287973,6 @@ self: { testHaskellDepends = [ base hspec text time ]; description = "Form handling support for Yesod Web Framework"; license = lib.licenses.mit; - hydraPlatforms = lib.platforms.none; }) {}; "yesod-form-bootstrap4" = callPackage @@ -286660,6 +288131,7 @@ self: { description = "Code for using the ip package with yesod"; license = lib.licenses.bsd3; hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "yesod-job-queue" = callPackage @@ -286818,8 +288290,8 @@ self: { }: mkDerivation { pname = "yesod-page-cursor"; - version = "2.0.0.7"; - sha256 = "1jkisnlbg5p5fd28r37xp844mjdpdz13s9dfpzbr30pxbyy57kf8"; + version = "2.0.0.8"; + sha256 = "1azd2kv5b36kryz3l587mn329a46m8mp4z8knzx5va24bmhca9jy"; libraryHaskellDepends = [ aeson base bytestring containers http-link-header network-uri text unliftio yesod-core @@ -288736,12 +290208,13 @@ self: { }) {}; "zenc" = callPackage - ({ mkDerivation, base }: + ({ mkDerivation, base, hedgehog, hspec, hspec-hedgehog }: mkDerivation { pname = "zenc"; - version = "0.1.1"; - sha256 = "0p0h7vz14k9v8gsnpkb9ca61i1k67vvsjg0bzy0ag4m20k94zlb2"; + version = "0.1.2"; + sha256 = "0y1waianb7jcad5y3ilns1mvf6mdk58ml1iwxcx1cawr9basj5xr"; libraryHaskellDepends = [ base ]; + testHaskellDepends = [ base hedgehog hspec hspec-hedgehog ]; description = "GHC style name Z-encoding and Z-decoding"; license = lib.licenses.bsd3; }) {}; @@ -289323,8 +290796,8 @@ self: { }: mkDerivation { pname = "zip"; - version = "1.7.0"; - sha256 = "11vdxpyxnh7hbsrpk8g90fd9abbk27dxi9g0mhxc1lxc6syjkzgl"; + version = "1.7.1"; + sha256 = "0impiv9xsirbvnpnv1lh6lhnl8a4fqylpjif7niyjjbcvyxh4zqd"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -290128,6 +291601,8 @@ self: { ]; description = "Password strength estimation based on zxcvbn"; license = lib.licenses.mit; + hydraPlatforms = lib.platforms.none; + broken = true; }) {}; "zydiskell" = callPackage diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/hoogle.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/hoogle.nix index cfa06b045d..d55f37f980 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/hoogle.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/hoogle.nix @@ -63,10 +63,13 @@ buildPackages.stdenv.mkDerivation { passAsFile = ["buildCommand"]; buildCommand = '' - ${lib.optionalString (packages != [] -> docPackages == []) + ${let # Filter out nulls here to work around https://github.com/NixOS/nixpkgs/issues/82245 + # If we don't then grabbing `p.name` here will fail. + packages' = lib.filter (p: p != null) packages; + in lib.optionalString (packages' != [] -> docPackages == []) ("echo WARNING: localHoogle package list empty, even though" + " the following were specified: " - + lib.concatMapStringsSep ", " (p: p.name) packages)} + + lib.concatMapStringsSep ", " (p: p.name) packages')} mkdir -p $out/share/doc/hoogle echo importing builtin packages diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/non-hackage-packages.nix b/third_party/nixpkgs/pkgs/development/haskell-modules/non-hackage-packages.nix index 1882d68f23..6bbcabbf5a 100644 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/non-hackage-packages.nix +++ b/third_party/nixpkgs/pkgs/development/haskell-modules/non-hackage-packages.nix @@ -22,6 +22,8 @@ self: super: { # https://github.com/spacchetti/spago/issues/512 spago = self.callPackage ../tools/purescript/spago/spago.nix { }; + nix-linter = self.callPackage ../../development/tools/analysis/nix-linter { }; + nix-output-monitor = self.callPackage ../../tools/nix/nix-output-monitor { }; # cabal2nix --revision https://github.com/hasura/ci-info-hs.git diff --git a/third_party/nixpkgs/pkgs/development/haskell-modules/patches/jsaddle-webkit2gtk.patch b/third_party/nixpkgs/pkgs/development/haskell-modules/patches/jsaddle-webkit2gtk.patch deleted file mode 100644 index 33c276926f..0000000000 --- a/third_party/nixpkgs/pkgs/development/haskell-modules/patches/jsaddle-webkit2gtk.patch +++ /dev/null @@ -1,65 +0,0 @@ -From 09f44aa3271390c14f92a3f196ab2ba475b4907f Mon Sep 17 00:00:00 2001 -From: Malte Brandy -Date: Fri, 14 Aug 2020 17:52:28 +0200 -Subject: [PATCH 1/2] jsaddle-webkit2gtk: Bump haskell-gi-base upper bound - ---- - jsaddle-webkit2gtk/jsaddle-webkit2gtk.cabal | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/jsaddle-webkit2gtk/jsaddle-webkit2gtk.cabal b/jsaddle-webkit2gtk/jsaddle-webkit2gtk.cabal -index 93d0b77..60c2312 100644 ---- a/jsaddle-webkit2gtk.cabal -+++ b/jsaddle-webkit2gtk.cabal -@@ -35,7 +35,7 @@ library - gi-gtk >=3.0.17 && <3.1, - gi-webkit2 >=4.0.14 && <4.1, - gi-javascriptcore >=4.0.14 && <4.1, -- haskell-gi-base >=0.20 && <0.24, -+ haskell-gi-base >=0.20 && <0.26, - haskell-gi-overloading >=0.0 && < 2.0, - jsaddle >=0.9.4.0 && <0.10, - text >=1.2.1.3 && <1.3, - -From f8427480ca827b2bee1d9b33dfa6118e14fe2924 Mon Sep 17 00:00:00 2001 -From: Malte Brandy -Date: Fri, 14 Aug 2020 18:10:26 +0200 -Subject: [PATCH 2/2] Locally define noAdjustment and noCancellable - -Those two convenience definitions disappeared from gi-gio and gi-gtk in -newer versions. ---- - .../src/Language/Javascript/JSaddle/WebKitGTK.hs | 10 ++++++++-- - 1 file changed, 8 insertions(+), 2 deletions(-) - -diff --git a/jsaddle-webkit2gtk/src/Language/Javascript/JSaddle/WebKitGTK.hs b/jsaddle-webkit2gtk/src/Language/Javascript/JSaddle/WebKitGTK.hs -index 898dac2..5249477 100644 ---- a/src/Language/Javascript/JSaddle/WebKitGTK.hs -+++ b/src/Language/Javascript/JSaddle/WebKitGTK.hs -@@ -55,11 +55,11 @@ import GI.GLib (timeoutAdd, idleAdd, pattern PRIORITY_HIGH, pattern PRIORITY_DEF - import qualified GI.Gtk as Gtk (main, init) - import GI.Gtk - (windowSetPosition, windowSetDefaultSize, windowNew, -- scrolledWindowNew, noAdjustment, containerAdd, -+ scrolledWindowNew, Adjustment, containerAdd, - WindowType(..), WindowPosition(..), widgetDestroy, - widgetGetToplevel, widgetShowAll, onWidgetDestroy, - mainQuit) --import GI.Gio (noCancellable) -+import GI.Gio (Cancellable) - import GI.JavaScriptCore (valueToString) - import GI.WebKit2 - (scriptDialogPromptSetText, scriptDialogPromptGetDefaultText, -@@ -82,6 +82,12 @@ import Language.Javascript.JSaddle (JSM, Results, Batch) - import Language.Javascript.JSaddle.Run (runJavaScript) - import Language.Javascript.JSaddle.Run.Files (initState, runBatch, ghcjsHelpers) - -+noAdjustment :: Maybe Adjustment -+noAdjustment = Nothing -+ -+noCancellable :: Maybe Cancellable -+noCancellable = Nothing -+ - quitWebView :: WebView -> IO () - quitWebView wv = postGUIAsync $ do w <- widgetGetToplevel wv --TODO: Shouldn't this be postGUISync? - widgetDestroy w diff --git a/third_party/nixpkgs/pkgs/development/interpreters/chibi/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/chibi/default.nix index 92531eacd2..c0ee8988c0 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/chibi/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/chibi/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchFromGitHub, makeWrapper }: let - version = "0.9.1"; + version = "0.10"; name = "chibi-scheme-${version}"; in stdenv.mkDerivation { @@ -18,7 +18,7 @@ stdenv.mkDerivation { owner = "ashinn"; repo = "chibi-scheme"; rev = version; - sha256 = "0nd63i924ifh39cba1hd4sbi6vh1cb73v97nrn4bf8rrjh3k8pdi"; + sha256 = "sha256-7vDxcnXhq1wJSLFHGxtwh+H+KWxh6B0JXSMPzSmQFXo="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/clips/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/clips/default.nix index 64fd89008e..2edeaf9e4e 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/clips/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/clips/default.nix @@ -1,14 +1,14 @@ { lib, stdenv, fetchurl }: stdenv.mkDerivation rec { - version = "6.31"; + version = "6.40"; pname = "clips"; src = fetchurl { url = "mirror://sourceforge/clipsrules/CLIPS/${version}/clips_core_source_${ builtins.replaceStrings [ "." ] [ "" ] version }.tar.gz"; - sha256 = "165k0z7dsv04q432sanmw0jxmxwf56cnhsdfw5ffjqxd3lzkjnv6"; + sha256 = "1pr5l61zxf6kjs8b2b028g2aq45pigavwjmrf4l5mrdmlnk3fq5d"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/interpreters/clojure/babashka.nix b/third_party/nixpkgs/pkgs/development/interpreters/clojure/babashka.nix index e52d6c20b9..58ed4c689b 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/clojure/babashka.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/clojure/babashka.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { pname = "babashka"; - version = "0.4.3"; + version = "0.4.5"; reflectionJson = fetchurl { name = "reflection.json"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://github.com/babashka/${pname}/releases/download/v${version}/${pname}-${version}-standalone.jar"; - sha256 = "sha256-teZKAwSv9wliVFKdT76yQjMC5g7SGPAqcq/jZ07sYjQ="; + sha256 = "sha256-SnKs30c6VTp1yzW2Glooi6ghSUIZgF6nsob1hDljTA8="; }; dontUnpack = true; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/clojure/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/clojure/default.nix index 80f9fac63c..9ae94f0a24 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/clojure/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/clojure/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { pname = "clojure"; - version = "1.10.3.849"; + version = "1.10.3.855"; src = fetchurl { # https://clojure.org/releases/tools url = "https://download.clojure.org/install/clojure-tools-${version}.tar.gz"; - sha256 = "sha256-0bHb6FsCZP1LdxY21+hz6lF+ka9N0yoIHUWVd+zc7wg="; + sha256 = "sha256-y2PuOBRq5kZlTpPV8NwkWhspQKlNxwjl+k/Drwixk4Q="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/interpreters/dart/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/dart/default.nix index 685d58f110..1d6abb5950 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/dart/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/dart/default.nix @@ -2,33 +2,32 @@ , lib , fetchurl , unzip -, version ? "2.12.2" -, sources ? - let +, version ? "2.13.1" +, sources ? let base = "https://storage.googleapis.com/dart-archive/channels"; x86_64 = "x64"; i686 = "ia32"; aarch64 = "arm64"; # Make sure that if the user overrides version parameter they're # also need to override sources, to avoid mistakes - version = "2.12.2"; + version = "2.13.1"; in { "${version}-x86_64-darwin" = fetchurl { url = "${base}/stable/release/${version}/sdk/dartsdk-macos-${x86_64}-release.zip"; - sha256 = "0h6mpy0kfc842vhg053fyxbjnd8lw1d1shdcsj800048260lxhyd"; + sha256 = "0kb6r2rmp5d0shvgyy37fmykbgww8qaj4f8k79rmqfv5lwa3izya"; }; "${version}-x86_64-linux" = fetchurl { url = "${base}/stable/release/${version}/sdk/dartsdk-linux-${x86_64}-release.zip"; - sha256 = "1gg210gf4yif3bl9k19znkndc4c1cd529xwxpi20ykaw3zfxxz2z"; + sha256 = "0zq8wngyrw01wjc5s6w1vz2jndms09ifiymjjixxby9k41mr6jrq"; }; "${version}-i686-linux" = fetchurl { url = "${base}/stable/release/${version}/sdk/dartsdk-linux-${i686}-release.zip"; - sha256 = "1wngxba71j20gq9vy7n8q0m9rnqs047xm5b03bxk3hhaq6dyzkwn"; + sha256 = "0zv4q8xv2i08a6izpyhhnil75qhs40m5mgyvjqjsswqkwqdf7lkj"; }; "${version}-aarch64-linux" = fetchurl { url = "${base}/stable/release/${version}/sdk/dartsdk-linux-${aarch64}-release.zip"; - sha256 = "0rqsmzl5g5kgk54qb03kamjm5n5g5pqfl79np37xdzwqbv0zx22b"; + sha256 = "0bb9jdmg5p608jmmiqibp13ydiw9avgysxlmljvgsl7wl93j6rgc"; }; } }: @@ -40,9 +39,7 @@ stdenv.mkDerivation { pname = "dart"; inherit version; - nativeBuildInputs = [ - unzip - ]; + nativeBuildInputs = [ unzip ]; src = sources."${version}-${stdenv.hostPlatform.system}" or (throw "unsupported version/system: ${version}/${stdenv.hostPlatform.system}"); diff --git a/third_party/nixpkgs/pkgs/development/interpreters/duktape/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/duktape/default.nix index 360666d898..ba533a1727 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/duktape/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/duktape/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl }: +{ lib, stdenv, fetchurl, validatePkgConfig }: stdenv.mkDerivation rec { pname = "duktape"; @@ -8,6 +8,8 @@ stdenv.mkDerivation rec { sha256 = "19szwxzvl2g65fw95ggvb8h0ma5bd9vvnnccn59hwnc4dida1x4n"; }; + nativeBuildInputs = [ validatePkgConfig ]; + postPatch = '' substituteInPlace Makefile.sharedlibrary \ --replace 'gcc' '${stdenv.cc.targetPrefix}cc' \ @@ -23,9 +25,10 @@ stdenv.mkDerivation rec { installPhase = '' install -d $out/bin install -m755 duk $out/bin/ - install -d $out/lib + install -d $out/lib/pkgconfig install -d $out/include make -f Makefile.sharedlibrary install INSTALL_PREFIX=$out + substituteAll ${./duktape.pc.in} $out/lib/pkgconfig/duktape.pc ''; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/duktape/duktape.pc.in b/third_party/nixpkgs/pkgs/development/interpreters/duktape/duktape.pc.in new file mode 100644 index 0000000000..d34edb320e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/interpreters/duktape/duktape.pc.in @@ -0,0 +1,10 @@ +prefix=@out@ +exec_prefix=${prefix} +libdir=${exec_prefix}/lib +includedir=${prefix}/include + +Name: duktape +Description: An embeddable Javascript engine, with a focus on portability and compact footprint +Version: @version@ +Libs: -L${libdir} -lduktape +Cflags: -I${includedir} diff --git a/third_party/nixpkgs/pkgs/development/interpreters/erlang/R21.nix b/third_party/nixpkgs/pkgs/development/interpreters/erlang/R21.nix index 3959c13e57..7706bd69fb 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/erlang/R21.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/erlang/R21.nix @@ -1,6 +1,6 @@ { mkDerivation }: mkDerivation { - version = "21.3.8.23"; - sha256 = "sha256-zIEXn2HuXeRKHfXmm0AAv9rEqqc4gIgaYek0hSUK5YU="; + version = "21.3.8.24"; + sha256 = "sha256-FNs+M4KFFKzfb4EG513HtyQ9eRRtxSPMpYq0bmRgY3g="; } diff --git a/third_party/nixpkgs/pkgs/development/interpreters/erlang/R22.nix b/third_party/nixpkgs/pkgs/development/interpreters/erlang/R22.nix index c69c26d4cb..9236ea4289 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/erlang/R22.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/erlang/R22.nix @@ -3,6 +3,6 @@ # How to obtain `sha256`: # nix-prefetch-url --unpack https://github.com/erlang/otp/archive/OTP-${version}.tar.gz mkDerivation { - version = "22.3.4.19"; - sha256 = "sha256-U3ks7pDIqS8HVJ+yBobhEbKvnd9svEcQd9BsJQwajDs="; + version = "22.3.4.20"; + sha256 = "sha256-EUErOCW16eUb/p5dLpFV7sQ3mXlCF/OgOvGAAyYEvLo="; } diff --git a/third_party/nixpkgs/pkgs/development/interpreters/erlang/R23.nix b/third_party/nixpkgs/pkgs/development/interpreters/erlang/R23.nix index ee788560dc..9e344adc15 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/erlang/R23.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/erlang/R23.nix @@ -3,6 +3,6 @@ # How to obtain `sha256`: # nix-prefetch-url --unpack https://github.com/erlang/otp/archive/OTP-${version}.tar.gz mkDerivation { - version = "23.3.4.2"; - sha256 = "QAIkiYBhYnUzyRg70SQ4BwjjYqclDA4uruqRNTgB2Sk="; + version = "23.3.4.4"; + sha256 = "dnoSGfBUZrgcnNQNAoqmVOxK/NQlt1DC187sxg7mPq8="; } diff --git a/third_party/nixpkgs/pkgs/development/interpreters/erlang/generic-builder.nix b/third_party/nixpkgs/pkgs/development/interpreters/erlang/generic-builder.nix index 1f2f3a25a5..13d2d33abf 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/erlang/generic-builder.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/erlang/generic-builder.nix @@ -142,8 +142,6 @@ stdenv.mkDerivation ({ wrapProgram $out/lib/erlang/bin/start_erl --prefix PATH ":" "${lib.makeBinPath [ gnused gawk ]}" ''; - setupHook = ./setup-hook.sh; - passthru = { updateScript = let major = builtins.head (builtins.splitVersion version); diff --git a/third_party/nixpkgs/pkgs/development/interpreters/erlang/setup-hook.sh b/third_party/nixpkgs/pkgs/development/interpreters/erlang/setup-hook.sh deleted file mode 100644 index 3962d154ba..0000000000 --- a/third_party/nixpkgs/pkgs/development/interpreters/erlang/setup-hook.sh +++ /dev/null @@ -1,5 +0,0 @@ -addErlangLibPath() { - addToSearchPath ERL_LIBS $1/lib/erlang/lib -} - -addEnvHooks "$hostOffset" addErlangLibPath diff --git a/third_party/nixpkgs/pkgs/development/interpreters/gnu-apl/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/gnu-apl/default.nix index abfa74bb67..108da08b80 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/gnu-apl/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/gnu-apl/default.nix @@ -37,6 +37,7 @@ stdenv.mkDerivation rec { maintainers = [ maintainers.kovirobi ]; platforms = with platforms; linux ++ darwin; inherit version; + mainProgram = "apl"; longDescription = '' GNU APL is a free interpreter for the programming language APL, with an diff --git a/third_party/nixpkgs/pkgs/development/interpreters/janet/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/janet/default.nix index 4c83626401..c0438d1e00 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/janet/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/janet/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "janet"; - version = "1.16.0"; + version = "1.16.1"; src = fetchFromGitHub { owner = "janet-lang"; repo = pname; rev = "v${version}"; - sha256 = "sha256-Wrr2zie251oB+uhsLMmkPBV0b3MwTmcPTgNJOsgCems="; + sha256 = "sha256-TzJbHmHIySlf3asQ02HOdehMR+s0KkPifBiaQ4FvFCg="; }; nativeBuildInputs = [ meson ninja ]; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/jruby/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/jruby/default.nix index 4e540dc8aa..68724a55b9 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/jruby/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/jruby/default.nix @@ -6,11 +6,11 @@ rubyVersion = callPackage ../ruby/ruby-version.nix {} "2" "5" "7" ""; jruby = stdenv.mkDerivation rec { pname = "jruby"; - version = "9.2.17.0"; + version = "9.2.19.0"; src = fetchurl { url = "https://s3.amazonaws.com/jruby.org/downloads/${version}/jruby-bin-${version}.tar.gz"; - sha256 = "sha256-dwHTU3s6YG0nZaxtXEDmdd2qAdPOutJqIaZuOq3VwgI="; + sha256 = "sha256-H3SIWi0/pYn8vrKSo5+s9/hr4+rBqwFeMsZdMqzz878="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/micropython/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/micropython/default.nix index 0441e48685..2e0b587acf 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/micropython/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/micropython/default.nix @@ -1,43 +1,82 @@ -{ stdenv, lib, fetchFromGitHub, pkg-config, libffi, python3, readline }: +{ stdenv +, lib +, fetchFromGitHub +, fetchpatch +, pkg-config +, libffi +, python3 +, readline +}: stdenv.mkDerivation rec { pname = "micropython"; - version = "1.13"; + version = "1.15"; src = fetchFromGitHub { owner = "micropython"; repo = "micropython"; rev = "v${version}"; - sha256 = "0m9g6isys4pnlnkdmrw7lxaxdrjn02j481wz5x5cdrmrbi4zi17z"; + sha256 = "11bf1lq4kgfs1nzg5cnshh2dqxyk5w2k816i04innri6fj0g7y6p"; fetchSubmodules = true; }; + # drop the following patches when upgrading to 1.16 + patches = [ + # fix build with modern clang https://github.com/micropython/micropython/pull/7254 + (fetchpatch { + url = "https://github.com/micropython/micropython/commit/126b1c727118352923703719a2a3d45b9fad3c97.patch"; + sha256 = "13a2bmz24syhd1qsqbx39dcjkjdhf05ln7lanh816m94lkfib21j"; + }) + # fix build with modern clang https://github.com/micropython/micropython/pull/7254 + (fetchpatch { + url = "https://github.com/micropython/micropython/commit/7ceccad4e2f1e9d073f5781c32e5b377e8391a25.patch"; + sha256 = "04mbxmb5yr6pbhhf9villq8km4wy579r46v9p4n0ysivrxij7i6f"; + }) + # fix build on aarch64-darwin https://github.com/micropython/micropython/pull/7393 + (fetchpatch { + url = "https://github.com/micropython/micropython/commit/95048129b1d93854c25f501c02801929aeeb23f0.patch"; + sha256 = "1cngcwq4jviyhdnfcrrkdadfikhffzbj0d634j0344cp247jb41n"; + }) + ]; + nativeBuildInputs = [ pkg-config python3 ]; buildInputs = [ libffi readline ]; - doCheck = true; - buildPhase = '' + runHook preBuild make -C mpy-cross make -C ports/unix + runHook postBuild ''; + doCheck = true; + + skippedTests = "" + + lib.optionalString (stdenv.isDarwin) " -e uasyncio_basic -e uasyncio_wait_task" + + lib.optionalString (stdenv.isDarwin && stdenv.isAarch64) " -e ffi_callback" + + lib.optionalString (stdenv.isLinux && stdenv.isAarch64) " -e float_parse" + ; + checkPhase = '' + runHook preCheck pushd tests - MICROPY_MICROPYTHON=../ports/unix/micropython ${python3.interpreter} ./run-tests + ${python3.interpreter} ./run-tests.py ${skippedTests} popd + runHook postCheck ''; installPhase = '' + runHook preInstall mkdir -p $out/bin - install -Dm755 ports/unix/micropython $out/bin/micropython + install -Dm755 ports/unix/micropython -t $out/bin + runHook postInstall ''; meta = with lib; { description = "A lean and efficient Python implementation for microcontrollers and constrained systems"; homepage = "https://micropython.org"; - platforms = [ "x86_64-linux" ]; + platforms = platforms.unix; license = licenses.mit; maintainers = with maintainers; [ sgo ]; }; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/php/7.4.nix b/third_party/nixpkgs/pkgs/development/interpreters/php/7.4.nix index 79e736b30d..7640e6bc64 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/php/7.4.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/php/7.4.nix @@ -1,17 +1,52 @@ -{ callPackage, lib, stdenv, nixosTests, ... }@_args: +{ callPackage, lib, stdenv, ... }@_args: let - generic = (import ./generic.nix) _args; - - base = callPackage generic (_args // { + base = callPackage ./generic.nix (_args // { version = "7.4.20"; sha256 = "0d5ncz97y0271dsmz269wl4721vhq2fn6pmm9rxglc756p36pnha"; }); -in base.withExtensions ({ all, ... }: with all; ([ - bcmath calendar curl ctype dom exif fileinfo filter ftp gd - gettext gmp iconv intl json ldap mbstring mysqli mysqlnd opcache - openssl pcntl pdo pdo_mysql pdo_odbc pdo_pgsql pdo_sqlite pgsql - posix readline session simplexml sockets soap sodium sqlite3 - tokenizer xmlreader xmlwriter zip zlib +in +base.withExtensions ({ all, ... }: with all; ([ + bcmath + calendar + curl + ctype + dom + exif + fileinfo + filter + ftp + gd + gettext + gmp + iconv + intl + json + ldap + mbstring + mysqli + mysqlnd + opcache + openssl + pcntl + pdo + pdo_mysql + pdo_odbc + pdo_pgsql + pdo_sqlite + pgsql + posix + readline + session + simplexml + sockets + soap + sodium + sqlite3 + tokenizer + xmlreader + xmlwriter + zip + zlib ] ++ lib.optionals (!stdenv.isDarwin) [ imap ])) diff --git a/third_party/nixpkgs/pkgs/development/interpreters/php/8.0.nix b/third_party/nixpkgs/pkgs/development/interpreters/php/8.0.nix index 9d357f88af..294f100ded 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/php/8.0.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/php/8.0.nix @@ -1,17 +1,51 @@ -{ callPackage, lib, stdenv, nixosTests, ... }@_args: +{ callPackage, lib, stdenv, ... }@_args: let - generic = (import ./generic.nix) _args; - - base = callPackage generic (_args // { + base = callPackage ./generic.nix (_args // { version = "8.0.7"; sha256 = "0yazcc9x66xg1gmi3rpgk891g6s3mm7aywcadqfqnx1mdz4z5ckj"; }); -in base.withExtensions ({ all, ... }: with all; ([ - bcmath calendar curl ctype dom exif fileinfo filter ftp gd - gettext gmp iconv intl ldap mbstring mysqli mysqlnd opcache - openssl pcntl pdo pdo_mysql pdo_odbc pdo_pgsql pdo_sqlite pgsql - posix readline session simplexml sockets soap sodium sqlite3 - tokenizer xmlreader xmlwriter zip zlib +in +base.withExtensions ({ all, ... }: with all; ([ + bcmath + calendar + curl + ctype + dom + exif + fileinfo + filter + ftp + gd + gettext + gmp + iconv + intl + ldap + mbstring + mysqli + mysqlnd + opcache + openssl + pcntl + pdo + pdo_mysql + pdo_odbc + pdo_pgsql + pdo_sqlite + pgsql + posix + readline + session + simplexml + sockets + soap + sodium + sqlite3 + tokenizer + xmlreader + xmlwriter + zip + zlib ] ++ lib.optionals (!stdenv.isDarwin) [ imap ])) diff --git a/third_party/nixpkgs/pkgs/development/interpreters/php/generic.nix b/third_party/nixpkgs/pkgs/development/interpreters/php/generic.nix index 233e1b7007..5344be9c5c 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/php/generic.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/php/generic.nix @@ -1,21 +1,38 @@ # We have tests for PCRE and PHP-FPM in nixos/tests/php/ or # both in the same attribute named nixosTests.php -{ callPackage, lib, stdenv, nixosTests, ... }: - let generic = - { callPackage, lib, stdenv, nixosTests, fetchurl, makeWrapper - , symlinkJoin, writeText, autoconf, automake, bison, flex, libtool - , pkg-config, re2c, apacheHttpd, libargon2, libxml2, pcre2 - , systemd, system-sendmail, valgrind, xcbuild + { callPackage + , lib + , stdenv + , nixosTests + , fetchurl + , makeWrapper + , symlinkJoin + , writeText + , autoconf + , automake + , bison + , flex + , libtool + , pkg-config + , re2c + , apacheHttpd + , libargon2 + , libxml2 + , pcre2 + , systemd + , system-sendmail + , valgrind + , xcbuild , version , sha256 - , extraPatches ? [] - , packageOverrides ? (final: prev: {}) + , extraPatches ? [ ] + , packageOverrides ? (final: prev: { }) - # Sapi flags + # Sapi flags , cgiSupport ? true , cliSupport ? true , fpmSupport ? true @@ -23,260 +40,264 @@ let , pharSupport ? true , phpdbgSupport ? true - # Misc flags + # Misc flags , apxs2Support ? !stdenv.isDarwin , argon2Support ? true , cgotoSupport ? false , embedSupport ? false , ipv6Support ? true , systemdSupport ? stdenv.isLinux - , valgrindSupport ? !stdenv.isDarwin + , valgrindSupport ? !stdenv.isDarwin && lib.meta.availableOn stdenv.hostPlatform valgrind , ztsSupport ? apxs2Support }@args: - let - # buildEnv wraps php to provide additional extensions and - # configuration. Its usage is documented in - # doc/languages-frameworks/php.section.md. - # - # Create a buildEnv with earlier overridden values and - # extensions functions in its closure. This is necessary for - # consecutive calls to buildEnv and overrides to work as - # expected. - mkBuildEnv = prevArgs: prevExtensionFunctions: lib.makeOverridable ( - { extensions ? ({ enabled, ... }: enabled), extraConfig ? "", ... }@innerArgs: + + let + # buildEnv wraps php to provide additional extensions and + # configuration. Its usage is documented in + # doc/languages-frameworks/php.section.md. + # + # Create a buildEnv with earlier overridden values and + # extensions functions in its closure. This is necessary for + # consecutive calls to buildEnv and overrides to work as + # expected. + mkBuildEnv = prevArgs: prevExtensionFunctions: lib.makeOverridable ( + { extensions ? ({ enabled, ... }: enabled), extraConfig ? "", ... }@innerArgs: + let + allArgs = args // prevArgs // innerArgs; + filteredArgs = builtins.removeAttrs allArgs [ "extensions" "extraConfig" ]; + php = generic filteredArgs; + + php-packages = (callPackage ../../../top-level/php-packages.nix { + phpPackage = phpWithExtensions; + }).overrideScope' packageOverrides; + + allExtensionFunctions = prevExtensionFunctions ++ [ extensions ]; + enabledExtensions = + builtins.foldl' + (enabled: f: + f { inherit enabled; all = php-packages.extensions; }) + [ ] + allExtensionFunctions; + + getExtName = ext: lib.removePrefix "php-" (builtins.parseDrvName ext.name).name; + + # Recursively get a list of all internal dependencies + # for a list of extensions. + getDepsRecursively = extensions: let - allArgs = args // prevArgs // innerArgs; - filteredArgs = builtins.removeAttrs allArgs [ "extensions" "extraConfig" ]; - php = generic filteredArgs; - - php-packages = (callPackage ../../../top-level/php-packages.nix { - phpPackage = phpWithExtensions; - }).overrideScope' packageOverrides; - - allExtensionFunctions = prevExtensionFunctions ++ [ extensions ]; - enabledExtensions = - builtins.foldl' - (enabled: f: - f { inherit enabled; all = php-packages.extensions; }) - [] - allExtensionFunctions; - - getExtName = ext: lib.removePrefix "php-" (builtins.parseDrvName ext.name).name; - - # Recursively get a list of all internal dependencies - # for a list of extensions. - getDepsRecursively = extensions: - let - deps = lib.concatMap - (ext: (ext.internalDeps or []) ++ (ext.peclDeps or [])) - extensions; - in - if ! (deps == []) then - deps ++ (getDepsRecursively deps) - else - deps; - - # Generate extension load configuration snippets from the - # extension parameter. This is an attrset suitable for use - # with textClosureList, which is used to put the strings in - # the right order - if a plugin which is dependent on - # another plugin is placed before its dependency, it will - # fail to load. - extensionTexts = - lib.listToAttrs - (map (ext: - let - extName = getExtName ext; - phpDeps = (ext.internalDeps or []) ++ (ext.peclDeps or []); - type = "${lib.optionalString (ext.zendExtension or false) "zend_"}extension"; - in - lib.nameValuePair extName { - text = "${type}=${ext}/lib/php/extensions/${extName}.so"; - deps = map getExtName phpDeps; - }) - (enabledExtensions ++ (getDepsRecursively enabledExtensions))); - - extNames = map getExtName enabledExtensions; - extraInit = writeText "php-extra-init-${version}.ini" '' - ${lib.concatStringsSep "\n" - (lib.textClosureList extensionTexts extNames)} - ${extraConfig} - ''; - - phpWithExtensions = symlinkJoin { - name = "php-with-extensions-${version}"; - inherit (php) version; - nativeBuildInputs = [ makeWrapper ]; - passthru = php.passthru // { - buildEnv = mkBuildEnv allArgs allExtensionFunctions; - withExtensions = mkWithExtensions allArgs allExtensionFunctions; - phpIni = "${phpWithExtensions}/lib/php.ini"; - unwrapped = php; - # Select the right php tests for the php version - tests = nixosTests."php${lib.strings.replaceStrings [ "." ] [ "" ] (lib.versions.majorMinor php.version)}"; - inherit (php-packages) extensions buildPecl; - packages = php-packages.tools; - meta = php.meta // { - outputsToInstall = [ "out" ]; - }; - }; - paths = [ php ]; - postBuild = '' - ln -s ${extraInit} $out/lib/php.ini - - if test -e $out/bin/php; then - wrapProgram $out/bin/php --set PHP_INI_SCAN_DIR $out/lib - fi - - if test -e $out/bin/php-fpm; then - wrapProgram $out/bin/php-fpm --set PHP_INI_SCAN_DIR $out/lib - fi - - if test -e $out/bin/phpdbg; then - wrapProgram $out/bin/phpdbg --set PHP_INI_SCAN_DIR $out/lib - fi - ''; - }; + deps = lib.concatMap + (ext: (ext.internalDeps or [ ]) ++ (ext.peclDeps or [ ])) + extensions; in - phpWithExtensions); + if ! (deps == [ ]) then + deps ++ (getDepsRecursively deps) + else + deps; - mkWithExtensions = prevArgs: prevExtensionFunctions: extensions: - mkBuildEnv prevArgs prevExtensionFunctions { inherit extensions; }; - in - stdenv.mkDerivation { - pname = "php"; + # Generate extension load configuration snippets from the + # extension parameter. This is an attrset suitable for use + # with textClosureList, which is used to put the strings in + # the right order - if a plugin which is dependent on + # another plugin is placed before its dependency, it will + # fail to load. + extensionTexts = + lib.listToAttrs + (map + (ext: + let + extName = getExtName ext; + phpDeps = (ext.internalDeps or [ ]) ++ (ext.peclDeps or [ ]); + type = "${lib.optionalString (ext.zendExtension or false) "zend_"}extension"; + in + lib.nameValuePair extName { + text = "${type}=${ext}/lib/php/extensions/${extName}.so"; + deps = map getExtName phpDeps; + }) + (enabledExtensions ++ (getDepsRecursively enabledExtensions))); - inherit version; - - enableParallelBuilding = true; - - nativeBuildInputs = [ autoconf automake bison flex libtool pkg-config re2c ] - ++ lib.optional stdenv.isDarwin xcbuild; - - buildInputs = - # PCRE extension - [ pcre2 ] - - # Enable sapis - ++ lib.optional pearSupport [ libxml2.dev ] - - # Misc deps - ++ lib.optional apxs2Support apacheHttpd - ++ lib.optional argon2Support libargon2 - ++ lib.optional systemdSupport systemd - ++ lib.optional valgrindSupport valgrind - ; - - CXXFLAGS = lib.optionalString stdenv.cc.isClang "-std=c++11"; - - configureFlags = - # Disable all extensions - [ "--disable-all" ] - - # PCRE - ++ lib.optionals (lib.versionAtLeast version "7.4") [ "--with-external-pcre=${pcre2.dev}" ] - ++ lib.optionals (lib.versions.majorMinor version == "7.3") [ "--with-pcre-regex=${pcre2.dev}" ] - ++ lib.optionals (lib.versionOlder version "7.3") [ "--with-pcre-regex=${pcre2.dev}" ] - ++ [ "PCRE_LIBDIR=${pcre2}" ] - - - # Enable sapis - ++ lib.optional (!cgiSupport) "--disable-cgi" - ++ lib.optional (!cliSupport) "--disable-cli" - ++ lib.optional fpmSupport "--enable-fpm" - ++ lib.optional pearSupport [ "--with-pear" "--enable-xml" "--with-libxml" ] - ++ lib.optionals (pearSupport && (lib.versionOlder version "7.4")) [ - "--enable-libxml" - "--with-libxml-dir=${libxml2.dev}" - ] - ++ lib.optional pharSupport "--enable-phar" - ++ lib.optional (!phpdbgSupport) "--disable-phpdbg" - - - # Misc flags - ++ lib.optional apxs2Support "--with-apxs2=${apacheHttpd.dev}/bin/apxs" - ++ lib.optional argon2Support "--with-password-argon2=${libargon2}" - ++ lib.optional cgotoSupport "--enable-re2c-cgoto" - ++ lib.optional embedSupport "--enable-embed" - ++ lib.optional (!ipv6Support) "--disable-ipv6" - ++ lib.optional systemdSupport "--with-fpm-systemd" - ++ lib.optional valgrindSupport "--with-valgrind=${valgrind.dev}" - ++ lib.optional (ztsSupport && (lib.versionOlder version "8.0")) "--enable-maintainer-zts" - ++ lib.optional (ztsSupport && (lib.versionAtLeast version "8.0")) "--enable-zts" - - - # Sendmail - ++ [ "PROG_SENDMAIL=${system-sendmail}/bin/sendmail" ] - ; - - hardeningDisable = [ "bindnow" ]; - - preConfigure = - # Don't record the configure flags since this causes unnecessary - # runtime dependencies - '' - for i in main/build-defs.h.in scripts/php-config.in; do - substituteInPlace $i \ - --replace '@CONFIGURE_COMMAND@' '(omitted)' \ - --replace '@CONFIGURE_OPTIONS@' "" \ - --replace '@PHP_LDFLAGS@' "" - done - - export EXTENSION_DIR=$out/lib/php/extensions - '' - # PKG_CONFIG need not be a relative path - + lib.optionalString (! lib.versionAtLeast version "7.4") '' - for i in $(find . -type f -name "*.m4"); do - substituteInPlace $i \ - --replace 'test -x "$PKG_CONFIG"' 'type -P "$PKG_CONFIG" >/dev/null' - done - '' + '' - ./buildconf --copy --force - - if test -f $src/genfiles; then - ./genfiles - fi - '' + lib.optionalString stdenv.isDarwin '' - substituteInPlace configure --replace "-lstdc++" "-lc++" + extNames = map getExtName enabledExtensions; + extraInit = writeText "php-extra-init-${version}.ini" '' + ${lib.concatStringsSep "\n" + (lib.textClosureList extensionTexts extNames)} + ${extraConfig} ''; - postInstall = '' - test -d $out/etc || mkdir $out/etc - cp php.ini-production $out/etc/php.ini - ''; + phpWithExtensions = symlinkJoin { + name = "php-with-extensions-${version}"; + inherit (php) version; + nativeBuildInputs = [ makeWrapper ]; + passthru = php.passthru // { + buildEnv = mkBuildEnv allArgs allExtensionFunctions; + withExtensions = mkWithExtensions allArgs allExtensionFunctions; + phpIni = "${phpWithExtensions}/lib/php.ini"; + unwrapped = php; + # Select the right php tests for the php version + tests = nixosTests."php${lib.strings.replaceStrings [ "." ] [ "" ] (lib.versions.majorMinor php.version)}"; + inherit (php-packages) extensions buildPecl; + packages = php-packages.tools; + meta = php.meta // { + outputsToInstall = [ "out" ]; + }; + }; + paths = [ php ]; + postBuild = '' + ln -s ${extraInit} $out/lib/php.ini - postFixup = '' - mkdir -p $dev/bin $dev/share/man/man1 - mv $out/bin/phpize $out/bin/php-config $dev/bin/ - mv $out/share/man/man1/phpize.1.gz \ - $out/share/man/man1/php-config.1.gz \ - $dev/share/man/man1/ - ''; + if test -e $out/bin/php; then + wrapProgram $out/bin/php --set PHP_INI_SCAN_DIR $out/lib + fi - src = fetchurl { - url = "https://www.php.net/distributions/php-${version}.tar.bz2"; - inherit sha256; + if test -e $out/bin/php-fpm; then + wrapProgram $out/bin/php-fpm --set PHP_INI_SCAN_DIR $out/lib + fi + + if test -e $out/bin/phpdbg; then + wrapProgram $out/bin/phpdbg --set PHP_INI_SCAN_DIR $out/lib + fi + ''; }; + in + phpWithExtensions + ); - patches = [ ./fix-paths-php7.patch ] ++ extraPatches; + mkWithExtensions = prevArgs: prevExtensionFunctions: extensions: + mkBuildEnv prevArgs prevExtensionFunctions { inherit extensions; }; + in + stdenv.mkDerivation { + pname = "php"; - separateDebugInfo = true; + inherit version; - outputs = [ "out" "dev" ]; + enableParallelBuilding = true; - passthru = { - buildEnv = mkBuildEnv {} []; - withExtensions = mkWithExtensions {} []; - inherit ztsSupport; - }; + nativeBuildInputs = [ autoconf automake bison flex libtool pkg-config re2c ] + ++ lib.optional stdenv.isDarwin xcbuild; - meta = with lib; { - description = "An HTML-embedded scripting language"; - homepage = "https://www.php.net/"; - license = licenses.php301; - maintainers = teams.php.members; - platforms = platforms.all; - outputsToInstall = [ "out" "dev" ]; - }; - }; -in generic + buildInputs = + # PCRE extension + [ pcre2 ] + + # Enable sapis + ++ lib.optional pearSupport [ libxml2.dev ] + + # Misc deps + ++ lib.optional apxs2Support apacheHttpd + ++ lib.optional argon2Support libargon2 + ++ lib.optional systemdSupport systemd + ++ lib.optional valgrindSupport valgrind + ; + + CXXFLAGS = lib.optionalString stdenv.cc.isClang "-std=c++11"; + + configureFlags = + # Disable all extensions + [ "--disable-all" ] + + # PCRE + ++ lib.optionals (lib.versionAtLeast version "7.4") [ "--with-external-pcre=${pcre2.dev}" ] + ++ lib.optionals (lib.versions.majorMinor version == "7.3") [ "--with-pcre-regex=${pcre2.dev}" ] + ++ lib.optionals (lib.versionOlder version "7.3") [ "--with-pcre-regex=${pcre2.dev}" ] + ++ [ "PCRE_LIBDIR=${pcre2}" ] + + + # Enable sapis + ++ lib.optional (!cgiSupport) "--disable-cgi" + ++ lib.optional (!cliSupport) "--disable-cli" + ++ lib.optional fpmSupport "--enable-fpm" + ++ lib.optional pearSupport [ "--with-pear" "--enable-xml" "--with-libxml" ] + ++ lib.optionals (pearSupport && (lib.versionOlder version "7.4")) [ + "--enable-libxml" + "--with-libxml-dir=${libxml2.dev}" + ] + ++ lib.optional pharSupport "--enable-phar" + ++ lib.optional (!phpdbgSupport) "--disable-phpdbg" + + + # Misc flags + ++ lib.optional apxs2Support "--with-apxs2=${apacheHttpd.dev}/bin/apxs" + ++ lib.optional argon2Support "--with-password-argon2=${libargon2}" + ++ lib.optional cgotoSupport "--enable-re2c-cgoto" + ++ lib.optional embedSupport "--enable-embed" + ++ lib.optional (!ipv6Support) "--disable-ipv6" + ++ lib.optional systemdSupport "--with-fpm-systemd" + ++ lib.optional valgrindSupport "--with-valgrind=${valgrind.dev}" + ++ lib.optional (ztsSupport && (lib.versionOlder version "8.0")) "--enable-maintainer-zts" + ++ lib.optional (ztsSupport && (lib.versionAtLeast version "8.0")) "--enable-zts" + + + # Sendmail + ++ [ "PROG_SENDMAIL=${system-sendmail}/bin/sendmail" ] + ; + + hardeningDisable = [ "bindnow" ]; + + preConfigure = + # Don't record the configure flags since this causes unnecessary + # runtime dependencies + '' + for i in main/build-defs.h.in scripts/php-config.in; do + substituteInPlace $i \ + --replace '@CONFIGURE_COMMAND@' '(omitted)' \ + --replace '@CONFIGURE_OPTIONS@' "" \ + --replace '@PHP_LDFLAGS@' "" + done + + export EXTENSION_DIR=$out/lib/php/extensions + '' + # PKG_CONFIG need not be a relative path + + lib.optionalString (!lib.versionAtLeast version "7.4") '' + for i in $(find . -type f -name "*.m4"); do + substituteInPlace $i \ + --replace 'test -x "$PKG_CONFIG"' 'type -P "$PKG_CONFIG" >/dev/null' + done + '' + '' + ./buildconf --copy --force + + if test -f $src/genfiles; then + ./genfiles + fi + '' + lib.optionalString stdenv.isDarwin '' + substituteInPlace configure --replace "-lstdc++" "-lc++" + ''; + + postInstall = '' + test -d $out/etc || mkdir $out/etc + cp php.ini-production $out/etc/php.ini + ''; + + postFixup = '' + mkdir -p $dev/bin $dev/share/man/man1 + mv $out/bin/phpize $out/bin/php-config $dev/bin/ + mv $out/share/man/man1/phpize.1.gz \ + $out/share/man/man1/php-config.1.gz \ + $dev/share/man/man1/ + ''; + + src = fetchurl { + url = "https://www.php.net/distributions/php-${version}.tar.bz2"; + inherit sha256; + }; + + patches = [ ./fix-paths-php7.patch ] ++ extraPatches; + + separateDebugInfo = true; + + outputs = [ "out" "dev" ]; + + passthru = { + buildEnv = mkBuildEnv { } [ ]; + withExtensions = mkWithExtensions { } [ ]; + inherit ztsSupport; + }; + + meta = with lib; { + description = "An HTML-embedded scripting language"; + homepage = "https://www.php.net/"; + license = licenses.php301; + maintainers = teams.php.members; + platforms = platforms.all; + outputsToInstall = [ "out" "dev" ]; + }; + }; +in +generic diff --git a/third_party/nixpkgs/pkgs/development/interpreters/python/conda/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/python/conda/default.nix index 5249ccce0d..77bda13f26 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/python/conda/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/python/conda/default.nix @@ -4,7 +4,7 @@ # When installing a conda binary package, just extend # the `buildInputs` with `condaAutopatchLibs`. condaPatchelfLibs = builtins.map (p: p.lib or p) ([ - pkgs.alsaLib + pkgs.alsa-lib pkgs.cups pkgs.gcc-unwrapped pkgs.libGL diff --git a/third_party/nixpkgs/pkgs/development/interpreters/python/cpython/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/python/cpython/default.nix index 38ee086a88..b8132cea4f 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/python/cpython/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/python/cpython/default.nix @@ -208,7 +208,7 @@ in with passthru; stdenv.mkDerivation { # * https://bugs.python.org/issue35523 # * https://github.com/python/cpython/commit/e6b247c8e524 ./3.7/no-win64-workaround.patch - ] ++ optionals (isPy37 || isPy38 || isPy39) [ + ] ++ optionals (pythonAtLeast "3.7") [ # Fix darwin build https://bugs.python.org/issue34027 ./3.7/darwin-libutil.patch ] ++ optionals (pythonOlder "3.8") [ @@ -227,7 +227,7 @@ in with passthru; stdenv.mkDerivation { ( if isPy35 then ./3.5/python-3.x-distutils-C++.patch - else if isPy37 || isPy38 || isPy39 then + else if pythonAtLeast "3.7" then ./3.7/python-3.x-distutils-C++.patch else fetchpatch { diff --git a/third_party/nixpkgs/pkgs/development/interpreters/python/fetchpypi.nix b/third_party/nixpkgs/pkgs/development/interpreters/python/fetchpypi.nix index e60c9df1f8..ebd277cd2b 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/python/fetchpypi.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/python/fetchpypi.nix @@ -5,10 +5,10 @@ let computeUrl = {format ? "setuptools", ... } @attrs: let - computeWheelUrl = {pname, version, python ? "py2.py3", abi ? "none", platform ? "any"}: + computeWheelUrl = {pname, version, dist ? "py2.py3", python ? "py2.py3", abi ? "none", platform ? "any"}: # Fetch a wheel. By default we fetch an universal wheel. # See https://www.python.org/dev/peps/pep-0427/#file-name-convention for details regarding the optional arguments. - "https://files.pythonhosted.org/packages/${python}/${builtins.substring 0 1 pname}/${pname}/${pname}-${version}-${python}-${abi}-${platform}.whl"; + "https://files.pythonhosted.org/packages/${dist}/${builtins.substring 0 1 pname}/${pname}/${pname}-${version}-${python}-${abi}-${platform}.whl"; computeSourceUrl = {pname, version, extension ? "tar.gz"}: # Fetch a source tarball. diff --git a/third_party/nixpkgs/pkgs/development/interpreters/python/hooks/pip-build-hook.sh b/third_party/nixpkgs/pkgs/development/interpreters/python/hooks/pip-build-hook.sh index 6dd384b484..745f02e8c9 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/python/hooks/pip-build-hook.sh +++ b/third_party/nixpkgs/pkgs/development/interpreters/python/hooks/pip-build-hook.sh @@ -7,7 +7,7 @@ pipBuildPhase() { mkdir -p dist echo "Creating a wheel..." - @pythonInterpreter@ -m pip wheel --no-index --no-deps --no-clean --no-build-isolation --wheel-dir dist . + @pythonInterpreter@ -m pip wheel --verbose --no-index --no-deps --no-clean --no-build-isolation --wheel-dir dist . echo "Finished creating a wheel..." runHook postBuild diff --git a/third_party/nixpkgs/pkgs/development/interpreters/python/hooks/python-remove-tests-dir-hook.sh b/third_party/nixpkgs/pkgs/development/interpreters/python/hooks/python-remove-tests-dir-hook.sh index 83bea786db..ad9e3c07cf 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/python/hooks/python-remove-tests-dir-hook.sh +++ b/third_party/nixpkgs/pkgs/development/interpreters/python/hooks/python-remove-tests-dir-hook.sh @@ -5,6 +5,7 @@ pythonRemoveTestsDir() { echo "Executing pythonRemoveTestsDir" rm -rf $out/@pythonSitePackages@/tests + rm -rf $out/@pythonSitePackages@/test echo "Finished executing pythonRemoveTestsDir" } @@ -12,4 +13,3 @@ pythonRemoveTestsDir() { if [ -z "${dontUsePythonRemoveTestsDir-}" ]; then postFixupHooks+=(pythonRemoveTestsDir) fi - diff --git a/third_party/nixpkgs/pkgs/development/interpreters/python/mk-python-derivation.nix b/third_party/nixpkgs/pkgs/development/interpreters/python/mk-python-derivation.nix index 4917b16704..963073df62 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/python/mk-python-derivation.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/python/mk-python-derivation.nix @@ -176,6 +176,8 @@ let # default to python's platforms platforms = python.meta.platforms; isBuildPythonPackage = python.meta.platforms; + } // lib.optionalAttrs (attrs?pname) { + mainProgram = attrs.pname; } // meta; } // lib.optionalAttrs (attrs?checkPhase) { # If given use the specified checkPhase, otherwise use the setup hook. diff --git a/third_party/nixpkgs/pkgs/development/interpreters/python/update-python-libraries/update-python-libraries.py b/third_party/nixpkgs/pkgs/development/interpreters/python/update-python-libraries/update-python-libraries.py index 9054195ab7..d3642592ae 100755 --- a/third_party/nixpkgs/pkgs/development/interpreters/python/update-python-libraries/update-python-libraries.py +++ b/third_party/nixpkgs/pkgs/development/interpreters/python/update-python-libraries/update-python-libraries.py @@ -217,8 +217,15 @@ def _get_latest_version_github(package, extension, current_version, target): release = next(filter(lambda x: strip_prefix(x['tag_name']) == version, releases)) prefix = get_prefix(release['tag_name']) - sha256 = subprocess.check_output(["nix-prefetch-url", "--type", "sha256", "--unpack", f"{release['tarball_url']}"], stderr=subprocess.DEVNULL)\ - .decode('utf-8').strip() + try: + sha256 = subprocess.check_output(["nix-prefetch-url", "--type", "sha256", "--unpack", f"{release['tarball_url']}"], stderr=subprocess.DEVNULL)\ + .decode('utf-8').strip() + except: + # this may fail if they have both a branch and a tag of the same name, attempt tag name + tag_url = str(release['tarball_url']).replace("tarball","tarball/refs/tags") + sha256 = subprocess.check_output(["nix-prefetch-url", "--type", "sha256", "--unpack", tag_url], stderr=subprocess.DEVNULL)\ + .decode('utf-8').strip() + return version, sha256, prefix diff --git a/third_party/nixpkgs/pkgs/development/interpreters/quickjs/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/quickjs/default.nix index ac70a50eaa..4bc0ec528a 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/quickjs/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/quickjs/default.nix @@ -1,17 +1,37 @@ -{ lib, stdenv, fetchurl }: +{ lib +, stdenv +, fetchFromGitHub +, texinfo +}: stdenv.mkDerivation rec { pname = "quickjs"; - version = "2020-11-08"; + version = "2021-03-27"; - src = fetchurl { - url = "https://bellard.org/${pname}/${pname}-${version}.tar.xz"; - sha256 = "0yqqcjxi3cqagw184mqrxpvqg486x7c233r3cp9mxachngd6779f"; + src = fetchFromGitHub { + owner = "bellard"; + repo = pname; + rev = "b5e62895c619d4ffc75c9d822c8d85f1ece77e5b"; + hash = "sha256-VMaxVVQuJ3DAwYrC14uJqlRBg0//ugYvtyhOXsTUbCA="; }; makeFlags = [ "prefix=${placeholder "out"}" ]; enableParallelBuilding = true; + nativeBuildInputs = [ + texinfo + ]; + + postBuild = '' + (cd doc + makeinfo *texi) + ''; + + postInstall = '' + (cd doc + install -Dt $out/share/doc *texi *info) + ''; + doInstallCheck = true; installCheckPhase = '' PATH="$out/bin:$PATH" @@ -32,7 +52,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "A small and embeddable Javascript engine"; homepage = "https://bellard.org/quickjs/"; - maintainers = with maintainers; [ stesie ]; + maintainers = with maintainers; [ stesie AndersonTorres ]; platforms = platforms.linux; license = licenses.mit; }; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/racket/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/racket/default.nix index 48be64aa0b..0b5084d435 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/racket/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/racket/default.nix @@ -47,7 +47,7 @@ in stdenv.mkDerivation rec { pname = "racket"; - version = "8.0"; # always change at once with ./minimal.nix + version = "8.1"; # always change at once with ./minimal.nix src = (lib.makeOverridable ({ name, sha256 }: fetchurl { @@ -56,7 +56,7 @@ stdenv.mkDerivation rec { } )) { name = "${pname}-${version}"; - sha256 = "0lqqpa88v0br93qw7450a4blyi3pwn7sq2k04h0ikbsqrdnfj7lj"; + sha256 = "0wlgp9dlibhv1d181arz309fszz31l5gb5gl94bqzfcav014g3k8"; }; FONTCONFIG_FILE = fontsConf; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/racket/minimal.nix b/third_party/nixpkgs/pkgs/development/interpreters/racket/minimal.nix index c954b4f05e..4cfb178d42 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/racket/minimal.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/racket/minimal.nix @@ -5,7 +5,7 @@ racket.overrideAttrs (oldAttrs: rec { name = "racket-minimal-${oldAttrs.version}"; src = oldAttrs.src.override { inherit name; - sha256 = "0qvfi6rg9cwzh716q5j7m30rqq9xysi6zsalqlpdqrzhnx8y54k0"; + sha256 = "1q54n16s0hmnry8q381wd7zfpyjndfjswn97vsbd4isngwz3w12k"; }; meta = oldAttrs.meta // { diff --git a/third_party/nixpkgs/pkgs/development/interpreters/rakudo/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/rakudo/default.nix index 358b866319..fdb3a78a1b 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/rakudo/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/rakudo/default.nix @@ -1,14 +1,16 @@ -{ stdenv, fetchurl, perl, icu, zlib, gmp, lib, nqp }: +{ stdenv, fetchurl, perl, icu, zlib, gmp, lib, nqp, removeReferencesTo }: stdenv.mkDerivation rec { pname = "rakudo"; - version = "2021.02.1"; + version = "2021.06"; src = fetchurl { - url = "https://www.rakudo.org/dl/rakudo/rakudo-${version}.tar.gz"; - sha256 = "1xwqx4357bw7h5pdmwxm5wxh8wjvrcdk4rvr3wyrhg1wzy5qvsn8"; + url = "https://rakudo.org/dl/rakudo/rakudo-${version}.tar.gz"; + sha256 = "11ixlqmvbb37abksdysg5r4lkbwzr486lkc0ssl3wca4iiy3mhgf"; }; + nativeBuildInputs = [ removeReferencesTo ]; + buildInputs = [ icu zlib gmp perl ]; configureScript = "perl ./Configure.pl"; configureFlags = [ @@ -16,15 +18,14 @@ stdenv.mkDerivation rec { "--with-nqp=${nqp}/bin/nqp" ]; - # Remove test of profiler, fails since 2020.09 - preCheck = "rm t/09-moar/01-profilers.t"; - - # Some tests fail on Darwin - doCheck = !stdenv.isDarwin; + disallowedReferences = [ stdenv.cc.cc ]; + postFixup = '' + remove-references-to -t ${stdenv.cc.cc} "$(readlink -f $out/share/perl6/runtime/dynext/libperl6_ops_moar.so)" + ''; meta = with lib; { description = "Raku implementation on top of Moar virtual machine"; - homepage = "https://www.rakudo.org"; + homepage = "https://rakudo.org"; license = licenses.artistic2; platforms = platforms.unix; maintainers = with maintainers; [ thoughtpolice vrthra sgo ]; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/rakudo/moarvm.nix b/third_party/nixpkgs/pkgs/development/interpreters/rakudo/moarvm.nix index e5baacf5c2..60a5e07154 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/rakudo/moarvm.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/rakudo/moarvm.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { pname = "moarvm"; - version = "2021.02"; + version = "2021.06"; src = fetchurl { - url = "https://www.moarvm.org/releases/MoarVM-${version}.tar.gz"; - sha256 = "08ri9mvbk97qfxcy6lj4cb7j3a789ck052m2vqfhis3vkrkw780r"; + url = "https://moarvm.org/releases/MoarVM-${version}.tar.gz"; + sha256 = "19vjcyb9fg9msjw1ih00c2qby480gl4highw24zx7j84slhsj013"; }; buildInputs = [ perl ] ++ lib.optionals stdenv.isDarwin [ CoreServices ApplicationServices ]; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "VM with adaptive optimization and JIT compilation, built for Rakudo"; - homepage = "https://www.moarvm.org/"; + homepage = "https://moarvm.org"; license = licenses.artistic2; platforms = platforms.unix; maintainers = with maintainers; [ thoughtpolice vrthra sgo ]; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/rakudo/nqp.nix b/third_party/nixpkgs/pkgs/development/interpreters/rakudo/nqp.nix index cd60bb3b79..4b456d819f 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/rakudo/nqp.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/rakudo/nqp.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "nqp"; - version = "2021.02"; + version = "2021.06"; src = fetchurl { url = "https://github.com/raku/nqp/releases/download/${version}/nqp-${version}.tar.gz"; - sha256 = "1vyl6x811f8mbdnp34yj6kfmfpxp2yfrr8cqf1w47rzmr741sjyj"; + sha256 = "1d00lajjdd2k510fb0cb6c8bpklvlnncykf6jz8j8djfp0b2i696"; }; buildInputs = [ perl ]; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/ruby/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/ruby/default.nix index 9179866fe9..9386eb75ab 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/ruby/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/ruby/default.nix @@ -12,7 +12,7 @@ let opString = lib.optionalString; patchSet = import ./rvm-patchsets.nix { inherit fetchFromGitHub; }; config = import ./config.nix { inherit fetchFromSavannah; }; - rubygems = import ./rubygems { inherit stdenv lib fetchurl; }; + rubygems = import ./rubygems { inherit stdenv lib fetchurl fetchpatch; }; # Contains the ruby version heuristics rubyVersion = import ./ruby-version.nix { inherit lib; }; diff --git a/third_party/nixpkgs/pkgs/development/interpreters/ruby/rubygems/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/ruby/rubygems/default.nix index db508caae3..cf2ca1b766 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/ruby/rubygems/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/ruby/rubygems/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchurl }: +{ stdenv, lib, fetchurl, fetchpatch }: stdenv.mkDerivation rec { name = "rubygems"; @@ -13,6 +13,12 @@ stdenv.mkDerivation rec { ./0001-add-post-extract-hook.patch ./0002-binaries-with-env-shebang.patch ./0003-gem-install-default-to-user.patch + # Ensure tmp directory are not left behind + # https://github.com/rubygems/rubygems/pull/4610 + (fetchpatch { + url = "https://github.com/rubygems/rubygems/commit/2c2ffde6e4a9f7f571d38af687034fb8507a833d.patch"; + sha256 = "sha256-bs2dXALKiJvMgk7lKjMx0NzGqlEqDYBBO35UrzNifms="; + }) ]; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/interpreters/spidermonkey/78.nix b/third_party/nixpkgs/pkgs/development/interpreters/spidermonkey/78.nix index 23f24ca8ba..9b81dcc55e 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/spidermonkey/78.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/spidermonkey/78.nix @@ -1,5 +1,6 @@ { lib, stdenv , fetchurl +, fetchpatch , autoconf213 , pkg-config , perl @@ -20,13 +21,22 @@ stdenv.mkDerivation rec { pname = "spidermonkey"; - version = "78.8.0"; + version = "78.11.0"; src = fetchurl { url = "mirror://mozilla/firefox/releases/${version}esr/source/firefox-${version}esr.source.tar.xz"; - sha256 = "0451hhjrj9hb6limxim7sbhvw4gs6dd2gmnfxjjx07z3wbgdzwhw"; + sha256 = "0zjpzkxx3wc2840d7q4b9lnkj1kwk1qps29s9c83jf5y6xclnf9q"; }; + patches = [ + # Fix build failure on armv7l using Debian patch + # Upstream bug: https://bugzilla.mozilla.org/show_bug.cgi?id=1526653 + (fetchpatch { + url = "https://salsa.debian.org/mozilla-team/firefox/commit/fd6847c9416f9eebde636e21d794d25d1be8791d.patch"; + sha256 = "02b7zwm6vxmk61aj79a6m32s1k5sr0hwm3q1j4v6np9jfyd10g1j"; + }) + ]; + outputs = [ "out" "dev" ]; setOutputFlags = false; # Configure script only understands --includedir diff --git a/third_party/nixpkgs/pkgs/development/interpreters/supercollider/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/supercollider/default.nix index b7efc37ae0..fc8d8f1652 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/supercollider/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/supercollider/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, mkDerivation, fetchurl, cmake, pkg-config, alsaLib +{ lib, stdenv, mkDerivation, fetchurl, cmake, pkg-config, alsa-lib , libjack2, libsndfile, fftw, curl, gcc , libXt, qtbase, qttools, qtwebengine , readline, qtwebsockets, useSCEL ? false, emacs @@ -27,7 +27,7 @@ mkDerivation rec { buildInputs = [ gcc libjack2 libsndfile fftw curl libXt qtbase qtwebengine qtwebsockets readline ] - ++ optional (!stdenv.isDarwin) alsaLib + ++ optional (!stdenv.isDarwin) alsa-lib ++ optional useSCEL emacs; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/interpreters/tcl/generic.nix b/third_party/nixpkgs/pkgs/development/interpreters/tcl/generic.nix index e665e8cfb1..beb95d51d2 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/tcl/generic.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/tcl/generic.nix @@ -1,55 +1,67 @@ -{ lib, stdenv +{ lib, stdenv, callPackage, makeSetupHook, makeWrapper # Version specific stuff , release, version, src , ... }: -stdenv.mkDerivation { - pname = "tcl"; - inherit version; +let + baseInterp = + stdenv.mkDerivation { + pname = "tcl"; + inherit version src; - inherit src; + outputs = [ "out" "man" ]; - outputs = [ "out" "man" ]; + setOutputFlags = false; - setOutputFlags = false; + preConfigure = '' + cd unix + ''; - preConfigure = '' - cd unix - ''; + configureFlags = [ + "--enable-threads" + # Note: using $out instead of $man to prevent a runtime dependency on $man. + "--mandir=${placeholder "out"}/share/man" + "--enable-man-symlinks" + # Don't install tzdata because NixOS already has a more up-to-date copy. + "--with-tzdata=no" + "tcl_cv_strtod_unbroken=ok" + ] ++ lib.optional stdenv.is64bit "--enable-64bit"; - configureFlags = [ - "--enable-threads" - # Note: using $out instead of $man to prevent a runtime dependency on $man. - "--mandir=${placeholder "out"}/share/man" - "--enable-man-symlinks" - # Don't install tzdata because NixOS already has a more up-to-date copy. - "--with-tzdata=no" - "tcl_cv_strtod_unbroken=ok" - ] ++ lib.optional stdenv.is64bit "--enable-64bit"; + enableParallelBuilding = true; - enableParallelBuilding = true; + postInstall = let + dllExtension = stdenv.hostPlatform.extensions.sharedLibrary; + in '' + make install-private-headers + ln -s $out/bin/tclsh${release} $out/bin/tclsh + ln -s $out/lib/libtcl${release}${dllExtension} $out/lib/libtcl${dllExtension} + ''; - postInstall = let - dllExtension = stdenv.hostPlatform.extensions.sharedLibrary; - in '' - make install-private-headers - ln -s $out/bin/tclsh${release} $out/bin/tclsh - ln -s $out/lib/libtcl${release}${dllExtension} $out/lib/libtcl${dllExtension} - ''; + meta = with lib; { + description = "The Tcl scripting language"; + homepage = "https://www.tcl.tk/"; + license = licenses.tcltk; + platforms = platforms.all; + maintainers = with maintainers; [ agbrooks ]; + }; - meta = with lib; { - description = "The Tcl scripting language"; - homepage = "https://www.tcl.tk/"; - license = licenses.tcltk; - platforms = platforms.all; - maintainers = with maintainers; [ vrthra ]; - }; + passthru = rec { + inherit release version; + libPrefix = "tcl${release}"; + libdir = "lib/${libPrefix}"; + tclPackageHook = callPackage ({}: makeSetupHook { + name = "tcl-package-hook"; + deps = [ makeWrapper ]; + } ./tcl-package-hook.sh) {}; + }; + }; - passthru = rec { - inherit release version; - libPrefix = "tcl${release}"; - libdir = "lib/${libPrefix}"; - }; -} + mkTclDerivation = callPackage ./mk-tcl-derivation.nix { tcl = baseInterp; }; + +in baseInterp.overrideAttrs (self: { + passthru = self.passthru // { + inherit mkTclDerivation; + }; +}) diff --git a/third_party/nixpkgs/pkgs/development/interpreters/tcl/mk-tcl-derivation.nix b/third_party/nixpkgs/pkgs/development/interpreters/tcl/mk-tcl-derivation.nix new file mode 100644 index 0000000000..4f3ffe6f99 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/interpreters/tcl/mk-tcl-derivation.nix @@ -0,0 +1,69 @@ +# Generic builder for tcl packages/applications, generally based on mk-python-derivation.nix +{ tcl +, lib +, makeWrapper +, runCommand +, writeScript +}: + +{ buildInputs ? [] +, nativeBuildInputs ? [] +, propagatedBuildInputs ? [] +, checkInputs ? [] + +# true if we should skip the configuration phase altogether +, dontConfigure ? false + +# Extra flags passed to configure step +, configureFlags ? [] + +# Whether or not we should add common Tcl-related configure flags +, addTclConfigureFlags ? true + +, meta ? {} +, passthru ? {} +, doCheck ? true +, ... } @ attrs: + +let + inherit (tcl) stdenv; + inherit (lib) getBin optionalAttrs optionals; + + defaultTclPkgConfigureFlags = [ + "--with-tcl=${tcl}/lib" + "--with-tclinclude=${tcl}/include" + "--exec-prefix=\${out}" + ]; + + self = (stdenv.mkDerivation ((builtins.removeAttrs attrs [ + "addTclConfigureFlags" "checkPhase" "checkInputs" "doCheck" + ]) // { + + buildInputs = buildInputs ++ [ makeWrapper tcl.tclPackageHook ]; + nativeBuildInputs = nativeBuildInputs ++ [ tcl ]; + propagatedBuildInputs = propagatedBuildInputs ++ [ tcl ]; + + TCLSH = "${getBin tcl}/bin/tclsh"; + + # Run tests after install, at which point we've done all TCLLIBPATH setup + doCheck = false; + doInstallCheck = attrs.doCheck or ((attrs ? doInstallCheck) && attrs.doInstallCheck); + installCheckInputs = checkInputs ++ (optionals (attrs ? installCheckInputs) attrs.installCheckInputs); + + # Add typical values expected by TEA for configureFlags + configureFlags = + if (!dontConfigure && addTclConfigureFlags) + then (configureFlags ++ defaultTclPkgConfigureFlags) + else configureFlags; + + meta = { + platforms = tcl.meta.platforms; + } // meta; + + + } // optionalAttrs (attrs?checkPhase) { + installCheckPhase = attrs.checkPhase; + } + )); + +in lib.extendDerivation true passthru self diff --git a/third_party/nixpkgs/pkgs/development/interpreters/tcl/tcl-package-hook.sh b/third_party/nixpkgs/pkgs/development/interpreters/tcl/tcl-package-hook.sh new file mode 100644 index 0000000000..747783cb1c --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/interpreters/tcl/tcl-package-hook.sh @@ -0,0 +1,74 @@ +# This hook ensures that we do the following in post-fixup: +# * wrap any installed executables with a wrapper that configures TCLLIBPATH +# * write a setup hook that extends the TCLLIBPATH of any anti-dependencies + +# Add a directory to TCLLIBPATH, provided that it exists +_addToTclLibPath() { + local tclPkg="$1" + if [[ -z "$tclPkg" ]]; then + return + fi + + if [[ ! -d "$tclPkg" ]]; then + >&2 echo "can't add $tclPkg to TCLLIBPATH; that directory doesn't exist" + exit 1 + fi + + if [[ "$tclPkg" == *" "* ]]; then + tclPkg="{$tclPkg}" + fi + + if [[ -z "${TCLLIBPATH-}" ]]; then + export TCLLIBPATH="$tclPkg" + else + if [[ "$TCLLIBPATH" != *"$tclPkg "* && "$TCLLIBPATH" != *"$tclPkg" ]]; then + export TCLLIBPATH="${TCLLIBPATH} $tclPkg" + fi + fi +} + +# Locate any directory containing an installed pkgIndex file +findInstalledTclPkgs() { + local -r newLibDir="${!outputLib}/lib" + if [[ ! -d "$newLibDir" ]]; then + >&2 echo "Assuming no loadable tcl packages installed ($newLibDir does not exist)" + return + fi + echo "$(find "$newLibDir" -name pkgIndex.tcl -exec dirname {} \;)" +} + +# Wrap any freshly-installed binaries and set up their TCLLIBPATH +wrapTclBins() { + if [[ -z "${TCLLIBPATH-}" ]]; then + echo "skipping automatic Tcl binary wrapping (nothing to do)" + return + fi + + local -r tclBinsDir="${!outputBin}/bin" + if [[ ! -d "$tclBinsDir" ]]; then + echo "No outputBin found, not using any TCLLIBPATH wrapper" + return + fi + + find "$tclBinsDir" -type f -executable -print | + while read -r someBin; do + echo "Adding TCLLIBPATH wrapper for $someBin" + wrapProgram "$someBin" --prefix TCLLIBPATH ' ' "$TCLLIBPATH" + done +} + +# Generate hook to adjust TCLLIBPATH in anti-dependencies +writeTclLibPathHook() { + local -r hookPath="${!outputLib}/nix-support/setup-hook" + mkdir -p "$(dirname "$hookPath")" + + typeset -f _addToTclLibPath >> "$hookPath" + local -r tclPkgs=$(findInstalledTclPkgs) + while IFS= read -r tclPkg; do + echo "_addToTclLibPath \"$tclPkg\"" >> "$hookPath" + _addToTclLibPath "$tclPkg" true + done <<< "$tclPkgs" +} + +postFixupHooks+=(writeTclLibPathHook) +postFixupHooks+=(wrapTclBins) diff --git a/third_party/nixpkgs/pkgs/development/interpreters/tclreadline/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/tclreadline/default.nix index 44d2745dac..de671bab57 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/tclreadline/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/tclreadline/default.nix @@ -8,7 +8,7 @@ , tk }: -stdenv.mkDerivation rec { +tcl.mkTclDerivation rec { pname = "tclreadline"; version = "2.3.8"; @@ -26,7 +26,6 @@ stdenv.mkDerivation rec { ]; buildInputs = [ readline - tcl tk ]; @@ -35,7 +34,6 @@ stdenv.mkDerivation rec { configureFlags = [ "--enable-tclshrl" "--enable-wishrl" - "--with-tcl=${tcl}/lib" "--with-tk=${tk}/lib" "--with-readline-includes=${readline.dev}/include/readline" "--with-libtool=${libtool}" diff --git a/third_party/nixpkgs/pkgs/development/interpreters/trealla/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/trealla/default.nix index 165251c8c5..4321130044 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/trealla/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/trealla/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "trealla"; - version = "1.7.65"; + version = "1.8.74"; src = fetchFromGitHub { owner = "infradig"; repo = "trealla"; rev = "v${version}"; - sha256 = "sha256-uCDACBwdiCeAwF6IZHz7s5pD83JXTP7jAQDjGld8tt0="; + sha256 = "sha256-pg9SfEFUTuyAnhP+Q1vR/QImZuLuRb8NpaOiCEcTFj8="; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/interpreters/wasm3/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/wasm3/default.nix new file mode 100644 index 0000000000..b16dc78ac0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/interpreters/wasm3/default.nix @@ -0,0 +1,33 @@ +{ lib, stdenv, cmake, fetchFromGitHub }: + +stdenv.mkDerivation rec { + pname = "wasm3"; + version = "0.5.0"; + + src = fetchFromGitHub { + owner = "wasm3"; + repo = "wasm3"; + rev = "v${version}"; + sha256 = "07zzmk776j8ydyxhrnnjiscbhhmz182a62r6aix6kfk5kq2cwia2"; + }; + + nativeBuildInputs = [ cmake ]; + + cmakeFlags = [ + "-DBUILD_WASI=simple" + ]; + + installPhase = '' + runHook preInstal + install -Dm755 wasm3 -t $out/bin + runHook postInstall + ''; + + meta = with lib; { + homepage = "https://github.com/wasm3/wasm3"; + description = "The fastest WebAssembly interpreter, and the most universal runtime."; + platforms = platforms.all; + maintainers = with maintainers; [ malbarbo ]; + license = licenses.mit; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/interpreters/wasmer/default.nix b/third_party/nixpkgs/pkgs/development/interpreters/wasmer/default.nix index d19600f39b..4dcb70bd3e 100644 --- a/third_party/nixpkgs/pkgs/development/interpreters/wasmer/default.nix +++ b/third_party/nixpkgs/pkgs/development/interpreters/wasmer/default.nix @@ -8,17 +8,17 @@ rustPlatform.buildRustPackage rec { pname = "wasmer"; - version = "1.0.2"; + version = "2.0.0"; src = fetchFromGitHub { owner = "wasmerio"; repo = pname; rev = version; - sha256 = "0ciia8hhkkyh6rmrxgbk3bgwjwzkcba6645wlcm0vlgk2w4i5m3z"; + sha256 = "191f60db2y1f3xw1x81mw88vclf1c4kgvnfv74g5vb3vn7n57c5j"; fetchSubmodules = true; }; - cargoSha256 = "140bzxhsyfif99x5a1m1d45ppb6jzvy9m4xil7z1wg2pnq9k7zz8"; + cargoSha256 = "0hhwixqhrl79hpzmvq7ga3kp2cfrwr4i8364cwnr7195xwnfxb0k"; nativeBuildInputs = [ cmake pkg-config ]; @@ -32,7 +32,9 @@ rustPlatform.buildRustPackage rec { ]; cargoTestFlags = [ - "--features" "test-cranelift,test-jit" + "--features" "test-cranelift" + # Can't use test-jit : + # error: Package `wasmer-workspace v2.0.0 (/build/source)` does not have the feature `test-jit` ]; LIBCLANG_PATH = "${llvmPackages.libclang.lib}/lib"; @@ -47,6 +49,6 @@ rustPlatform.buildRustPackage rec { ''; homepage = "https://wasmer.io/"; license = licenses.mit; - maintainers = with maintainers; [ Br1ght0ne ]; + maintainers = with maintainers; [ Br1ght0ne shamilton ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/CGAL/default.nix b/third_party/nixpkgs/pkgs/development/libraries/CGAL/default.nix index bd8edc14a8..3ca359b3da 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/CGAL/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/CGAL/default.nix @@ -8,13 +8,13 @@ stdenv.mkDerivation rec { pname = "cgal"; - version = "5.2.1"; + version = "5.2.2"; src = fetchFromGitHub { owner = "CGAL"; repo = "releases"; rev = "CGAL-${version}"; - sha256 = "sha256-sJyeehgt84rLX8ZBYIbFgHLG2aJDDHEj5GeVnQhjiOQ="; + sha256 = "sha256-DeTJAAY3OEu+pVazt5es1v3l1nGAfjvE0wQmYISRYoo="; }; # note: optional component libCGAL_ImageIO would need zlib and opengl; diff --git a/third_party/nixpkgs/pkgs/development/libraries/SDL/default.nix b/third_party/nixpkgs/pkgs/development/libraries/SDL/default.nix index b51bc3f7cd..bf76bc1e85 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/SDL/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/SDL/default.nix @@ -1,7 +1,7 @@ { lib, stdenv, config, fetchurl, fetchpatch, pkg-config, audiofile, libcap, libiconv , libGLSupported ? lib.elem stdenv.hostPlatform.system lib.platforms.mesaPlatforms , openglSupport ? libGLSupported, libGL, libGLU -, alsaSupport ? stdenv.isLinux && !stdenv.hostPlatform.isAndroid, alsaLib +, alsaSupport ? stdenv.isLinux && !stdenv.hostPlatform.isAndroid, alsa-lib , x11Support ? !stdenv.isCygwin && !stdenv.hostPlatform.isAndroid , libXext, libICE, libXrandr , pulseaudioSupport ? config.pulseaudio or stdenv.isLinux && !stdenv.hostPlatform.isAndroid, libpulseaudio @@ -17,7 +17,7 @@ let extraPropagatedBuildInputs = [ ] ++ optionals x11Support [ libXext libICE libXrandr ] ++ optionals openglSupport [ libGL libGLU ] - ++ optional alsaSupport alsaLib + ++ optional alsaSupport alsa-lib ++ optional pulseaudioSupport libpulseaudio ++ optional stdenv.isDarwin Cocoa; rpath = makeLibraryPath extraPropagatedBuildInputs; @@ -59,7 +59,7 @@ stdenv.mkDerivation rec { # Please try revert the change that introduced this comment when updating SDL. ] ++ optional stdenv.isDarwin "--disable-x11-shared" ++ optional (!x11Support) "--without-x" - ++ optional alsaSupport "--with-alsa-prefix=${alsaLib.out}/lib"; + ++ optional alsaSupport "--with-alsa-prefix=${alsa-lib.out}/lib"; patches = [ ./find-headers.patch diff --git a/third_party/nixpkgs/pkgs/development/libraries/SDL2/default.nix b/third_party/nixpkgs/pkgs/development/libraries/SDL2/default.nix index f70a46e2f8..d02dac1f56 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/SDL2/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/SDL2/default.nix @@ -1,7 +1,7 @@ { lib, stdenv, config, fetchurl, pkg-config , libGLSupported ? lib.elem stdenv.hostPlatform.system lib.platforms.mesaPlatforms , openglSupport ? libGLSupported, libGL -, alsaSupport ? stdenv.isLinux && !stdenv.hostPlatform.isAndroid, alsaLib +, alsaSupport ? stdenv.isLinux && !stdenv.hostPlatform.isAndroid, alsa-lib , x11Support ? !stdenv.targetPlatform.isWindows && !stdenv.hostPlatform.isAndroid , libX11, xorgproto, libICE, libXi, libXScrnSaver, libXcursor , libXinerama, libXext, libXxf86vm, libXrandr @@ -60,7 +60,7 @@ stdenv.mkDerivation rec { ++ optionals x11Support [ libX11 xorgproto ]; dlopenBuildInputs = [ ] - ++ optionals alsaSupport [ alsaLib audiofile ] + ++ optionals alsaSupport [ alsa-lib audiofile ] ++ optional dbusSupport dbus ++ optional pulseaudioSupport libpulseaudio ++ optional udevSupport udev @@ -78,7 +78,7 @@ stdenv.mkDerivation rec { configureFlags = [ "--disable-oss" ] ++ optional (!x11Support) "--without-x" - ++ optional alsaSupport "--with-alsa-prefix=${alsaLib.out}/lib" + ++ optional alsaSupport "--with-alsa-prefix=${alsa-lib.out}/lib" ++ optional stdenv.targetPlatform.isWindows "--disable-video-opengles" ++ optional stdenv.isDarwin "--disable-sdltest"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/a52dec/default.nix b/third_party/nixpkgs/pkgs/development/libraries/a52dec/default.nix index faa819ec56..74122f7ed2 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/a52dec/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/a52dec/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "0.7.4"; src = fetchurl { - url = "${meta.homepage}/files/${pname}-${version}.tar.gz"; + url = "https://liba52.sourceforge.net/files/${pname}-${version}.tar.gz"; sha256 = "oh1ySrOzkzMwGUNTaH34LEdbXfuZdRPu9MJd5shl7DM="; }; @@ -13,6 +13,10 @@ stdenv.mkDerivation rec { "--enable-shared" ]; + makeFlags = [ + "AR=${stdenv.cc.targetPrefix}ar" + ]; + # fails 1 out of 1 tests with "BAD GLOBAL SYMBOLS" on i686 # which can also be fixed with # hardeningDisable = lib.optional stdenv.isi686 "pic"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/acl/default.nix b/third_party/nixpkgs/pkgs/development/libraries/acl/default.nix index e0b1f05516..936e793caf 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/acl/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/acl/default.nix @@ -6,11 +6,11 @@ # files. stdenv.mkDerivation rec { - name = "acl-2.3.0"; + name = "acl-2.3.1"; src = fetchurl { url = "mirror://savannah/acl/${name}.tar.gz"; - sha256 = "sha256-vTj9u7A8eTdK9RRn6+VJfLwDNbgld/MMlRpBqVtTMAk="; + sha256 = "sha256-dgxhxokBs3/dXu/ur0wMeia9/disdHoe3/HODiQ8Ea8="; }; outputs = [ "bin" "dev" "out" "man" "doc" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/alembic/default.nix b/third_party/nixpkgs/pkgs/development/libraries/alembic/default.nix index 333dbb053f..0ed9aa2047 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/alembic/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/alembic/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "alembic"; - version = "1.8.1"; + version = "1.8.2"; src = fetchFromGitHub { owner = "alembic"; repo = "alembic"; rev = version; - sha256 = "sha256-ObjpWreabeVzKYVgC62JaoGUf1BZCxP0STjox3akDvo="; + sha256 = "sha256-e87pnWIV8fbjEQa5iXRPXA9MkJN9NwY9PW/QI+cVSKo="; }; outputs = [ "bin" "dev" "out" "lib" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/allegro/5.nix b/third_party/nixpkgs/pkgs/development/libraries/allegro/5.nix index 3143474112..5cd6584f18 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/allegro/5.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/allegro/5.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, fetchpatch, texinfo, libXext, xorgproto, libX11 -, libXpm, libXt, libXcursor, alsaLib, cmake, zlib, libpng, libvorbis +, libXpm, libXt, libXcursor, alsa-lib, cmake, zlib, libpng, libvorbis , libXxf86dga, libXxf86misc , libXxf86vm, openal, libGLU, libGL, libjpeg, flac , libXi, libXfixes, freetype, libopus, libtheora @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { buildInputs = [ texinfo libXext xorgproto libX11 libXpm libXt libXcursor - alsaLib cmake zlib libpng libvorbis libXxf86dga libXxf86misc + alsa-lib cmake zlib libpng libvorbis libXxf86dga libXxf86misc libXxf86vm openal libGLU libGL libjpeg flac libXi libXfixes diff --git a/third_party/nixpkgs/pkgs/development/libraries/allegro/default.nix b/third_party/nixpkgs/pkgs/development/libraries/allegro/default.nix index 9fefbe01ac..6abf632806 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/allegro/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/allegro/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, texinfo6_5, libXext, xorgproto, libX11 -, libXpm, libXt, libXcursor, alsaLib, cmake, zlib, libpng, libvorbis +, libXpm, libXt, libXcursor, alsa-lib, cmake, zlib, libpng, libvorbis , libXxf86dga, libXxf86misc , libXxf86vm, openal, libGLU, libGL }: @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { buildInputs = [ texinfo6_5 libXext xorgproto libX11 libXpm libXt libXcursor - alsaLib cmake zlib libpng libvorbis libXxf86dga libXxf86misc + alsa-lib cmake zlib libpng libvorbis libXxf86dga libXxf86misc libXxf86vm openal libGLU libGL ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/amdvlk/default.nix b/third_party/nixpkgs/pkgs/development/libraries/amdvlk/default.nix index 5693a5968b..5d5277afcd 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/amdvlk/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/amdvlk/default.nix @@ -21,13 +21,13 @@ let in stdenv.mkDerivation rec { pname = "amdvlk"; - version = "2021.Q2.2"; + version = "2021.Q2.5"; src = fetchRepoProject { name = "${pname}-src"; manifest = "https://github.com/GPUOpen-Drivers/AMDVLK.git"; rev = "refs/tags/v-${version}"; - sha256 = "4k9ZkBxJGuNUO44F9D+u54eUREl5/8zxjxhaShhzGv0="; + sha256 = "0NJoGk++SHt4dtoUj3UQeW4zFtwa7osczUr+vxi8DG8="; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/appstream/default.nix b/third_party/nixpkgs/pkgs/development/libraries/appstream/default.nix index 96c6b36239..c39ea78a77 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/appstream/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/appstream/default.nix @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { pname = "appstream"; - version = "0.14.3"; + version = "0.14.4"; outputs = [ "out" "dev" ]; @@ -34,7 +34,7 @@ stdenv.mkDerivation rec { owner = "ximion"; repo = "appstream"; rev = "v${version}"; - sha256 = "sha256-wCQR+4/F5lVqWHHcH/WS4irBGRivz3c1imasyLDIZIs="; + sha256 = "sha256-DJXCw50f+8c58bJw6xx0ECfkc9/KcWaeA+ne2zmTyhg="; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/armadillo/default.nix b/third_party/nixpkgs/pkgs/development/libraries/armadillo/default.nix index 9e81ce0c6c..9fdccfb3fa 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/armadillo/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/armadillo/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "armadillo"; - version = "10.5.1"; + version = "10.5.2"; src = fetchurl { url = "mirror://sourceforge/arma/armadillo-${version}.tar.xz"; - sha256 = "sha256-lq1uHLzyjz0cH/ly3ixA2t3b12gyVrrVAtPEY9L2TN8="; + sha256 = "sha256-Y/I87cVIpelASBblDPj4/MSSqxqtxsDO8wv8Kvzq2V8="; }; nativeBuildInputs = [ cmake ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/atk/default.nix b/third_party/nixpkgs/pkgs/development/libraries/atk/default.nix index 7961211dc6..38c5573169 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/atk/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/atk/default.nix @@ -1,5 +1,6 @@ { lib, stdenv, fetchurl, meson, ninja, gettext, pkg-config, glib , fixDarwinDylibNames, gobject-introspection, gnome +, withIntrospection ? stdenv.buildPlatform == stdenv.hostPlatform }: let @@ -17,8 +18,9 @@ stdenv.mkDerivation rec { outputs = [ "out" "dev" ]; - nativeBuildInputs = [ meson ninja pkg-config gettext gobject-introspection glib ] - ++ lib.optional stdenv.hostPlatform.isDarwin fixDarwinDylibNames; + nativeBuildInputs = [ meson ninja pkg-config gettext glib ] + ++ lib.optional stdenv.hostPlatform.isDarwin fixDarwinDylibNames + ++ lib.optional withIntrospection gobject-introspection; propagatedBuildInputs = [ # Required by atk.pc @@ -31,6 +33,10 @@ stdenv.mkDerivation rec { ./fix_pc.patch ]; + mesonFlags = [ + "-Dintrospection=${lib.boolToString withIntrospection}" + ]; + doCheck = true; passthru = { diff --git a/third_party/nixpkgs/pkgs/development/libraries/attr/default.nix b/third_party/nixpkgs/pkgs/development/libraries/attr/default.nix index b81afc24ee..b7c9287b68 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/attr/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/attr/default.nix @@ -31,15 +31,7 @@ stdenv.mkDerivation rec { meta = with lib; { homepage = "https://savannah.nongnu.org/projects/attr/"; description = "Library and tools for manipulating extended attributes"; - platforms = platforms.unix; + platforms = platforms.linux; license = licenses.gpl2Plus; - - # The build failure on Darwin will likely be solved after upgrading the - # macOS SDK in nixpkgs. Check the current SDK version in - # ../../../../os-specific/darwin/apple-sdk/default.nix to see if it has - # been updated to 10.13 or later. Once the requirements are met, building - # it should be straightforward as Homebrew was able to build it without - # patching. - broken = stdenv.isDarwin; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/aubio/default.nix b/third_party/nixpkgs/pkgs/development/libraries/aubio/default.nix index b1c6c6396c..e1f2d32687 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/aubio/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/aubio/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, fftw, libjack2, libsamplerate +{ lib, stdenv, fetchurl, alsa-lib, fftw, libjack2, libsamplerate , libsndfile, pkg-config, python3, wafHook }: @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config python3 wafHook ]; - buildInputs = [ alsaLib fftw libjack2 libsamplerate libsndfile ]; + buildInputs = [ alsa-lib fftw libjack2 libsamplerate libsndfile ]; strictDeps = true; diff --git a/third_party/nixpkgs/pkgs/development/libraries/audio/libbass/default.nix b/third_party/nixpkgs/pkgs/development/libraries/audio/libbass/default.nix index 2e10dbd881..49a3a5478c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/audio/libbass/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/audio/libbass/default.nix @@ -15,7 +15,7 @@ let x86_64-linux = "x64/libbass.so"; }; urlpath = "bass24-linux.zip"; - sha256 = "1z01im0l2ydi608vc0n0c1cfyp1vrh6681zn2zkhg98vvs20y805"; + sha256 = "1ycvpfa7yyi1qxgflpfzcw1q32f0isd14m9cf351pk8zwndkmp4q"; }; bass_fx = { diff --git a/third_party/nixpkgs/pkgs/development/libraries/audio/rtaudio/default.nix b/third_party/nixpkgs/pkgs/development/libraries/audio/rtaudio/default.nix index 03048abcc3..4f2f78f20c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/audio/rtaudio/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/audio/rtaudio/default.nix @@ -6,7 +6,7 @@ , cmake , pkg-config , alsaSupport ? stdenv.hostPlatform.isLinux -, alsaLib +, alsa-lib , pulseaudioSupport ? config.pulseaudio or stdenv.hostPlatform.isLinux , libpulseaudio , jackSupport ? true @@ -43,7 +43,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; - buildInputs = lib.optional alsaSupport alsaLib + buildInputs = lib.optional alsaSupport alsa-lib ++ lib.optional pulseaudioSupport libpulseaudio ++ lib.optional jackSupport jack ++ lib.optional coreaudioSupport CoreAudio; diff --git a/third_party/nixpkgs/pkgs/development/libraries/audio/rtmidi/default.nix b/third_party/nixpkgs/pkgs/development/libraries/audio/rtmidi/default.nix index ccfafd36a8..6c75b9866e 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/audio/rtmidi/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/audio/rtmidi/default.nix @@ -5,7 +5,7 @@ , cmake , pkg-config , alsaSupport ? stdenv.hostPlatform.isLinux -, alsaLib +, alsa-lib , jackSupport ? true , jack , coremidiSupport ? stdenv.hostPlatform.isDarwin @@ -51,7 +51,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; - buildInputs = lib.optional alsaSupport alsaLib + buildInputs = lib.optional alsaSupport alsa-lib ++ lib.optional jackSupport jack ++ lib.optionals coremidiSupport [ CoreMIDI CoreAudio CoreServices ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/audio/zita-alsa-pcmi/default.nix b/third_party/nixpkgs/pkgs/development/libraries/audio/zita-alsa-pcmi/default.nix index 45f5fcfe3a..afecd561b7 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/audio/zita-alsa-pcmi/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/audio/zita-alsa-pcmi/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl , alsaLib, }: +{ lib, stdenv, fetchurl , alsa-lib, }: stdenv.mkDerivation rec { pname = "zita-alsa-pcmi"; @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { sha256 = "12d7vdg74yh21w69qi0wg57iz4876j94qbiq09bvscih6xz9y78s"; }; - buildInputs = [ alsaLib ]; + buildInputs = [ alsa-lib ]; buildPhase = '' cd source diff --git a/third_party/nixpkgs/pkgs/development/libraries/audiofile/default.nix b/third_party/nixpkgs/pkgs/development/libraries/audiofile/default.nix index 88b1840955..54df6d7b25 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/audiofile/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/audiofile/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchurl, fetchpatch, alsaLib, AudioUnit, CoreServices }: +{ stdenv, lib, fetchurl, fetchpatch, alsa-lib, AudioUnit, CoreServices }: let @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { buildInputs = lib.optionals stdenv.isLinux [ - alsaLib + alsa-lib ] ++ lib.optionals stdenv.isDarwin [ CoreServices AudioUnit ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/aws-sdk-cpp/default.nix b/third_party/nixpkgs/pkgs/development/libraries/aws-sdk-cpp/default.nix index dd215dc01c..2aa5ea015f 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/aws-sdk-cpp/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/aws-sdk-cpp/default.nix @@ -25,15 +25,21 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake curl ]; buildInputs = [ - curl openssl s2n-tls zlib - aws-c-common aws-c-event-stream aws-checksums + curl openssl zlib ] ++ lib.optionals (stdenv.isDarwin && ((builtins.elem "text-to-speech" apis) || (builtins.elem "*" apis))) [ CoreAudio AudioToolbox ]; # propagation is needed for Security.framework to be available when linking - propagatedBuildInputs = [ aws-c-cal aws-c-io ]; + propagatedBuildInputs = [ + aws-c-cal + aws-c-event-stream + aws-c-io + aws-c-common + aws-checksums + s2n-tls + ]; cmakeFlags = [ "-DBUILD_DEPS=OFF" diff --git a/third_party/nixpkgs/pkgs/development/libraries/bamf/default.nix b/third_party/nixpkgs/pkgs/development/libraries/bamf/default.nix index faee853808..f1a7420fbc 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/bamf/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/bamf/default.nix @@ -7,7 +7,7 @@ , which , fetchgit , libgtop -, libwnck3 +, libwnck , glib , vala , pkg-config @@ -54,7 +54,7 @@ stdenv.mkDerivation rec { glib libgtop libstartup_notification - libwnck3 + libwnck ]; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/bctoolbox/default.nix b/third_party/nixpkgs/pkgs/development/libraries/bctoolbox/default.nix index c482b55c60..9cdede7852 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/bctoolbox/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/bctoolbox/default.nix @@ -7,7 +7,7 @@ stdenv.mkDerivation rec { pname = "bctoolbox"; - version = "4.5.15"; + version = "4.5.20"; nativeBuildInputs = [ cmake bcunit ]; buildInputs = [ mbedtls ]; @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { group = "BC"; repo = pname; rev = version; - sha256 = "sha256-yN9dfeJBuUxXfG7zDoawn2nKGsrhetBcXpGDmcekU20="; + sha256 = "sha256-n/S0G7dGaDWWsvOITceITmWUNpebcHMedkLTklxGjQg="; }; # Do not build static libraries diff --git a/third_party/nixpkgs/pkgs/development/libraries/box2d/default.nix b/third_party/nixpkgs/pkgs/development/libraries/box2d/default.nix index 1b6ede9b31..64349b1e3c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/box2d/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/box2d/default.nix @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { description = "2D physics engine"; homepage = "https://box2d.org/"; maintainers = [ maintainers.raskin ]; - platforms = platforms.linux; + platforms = platforms.unix; license = licenses.zlib; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/bwidget/default.nix b/third_party/nixpkgs/pkgs/development/libraries/bwidget/default.nix index f3f09497a6..34f0e8b5b4 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/bwidget/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/bwidget/default.nix @@ -1,6 +1,6 @@ -{ lib, stdenv, fetchurl, tcl }: +{ lib, fetchurl, tcl, tk }: -stdenv.mkDerivation rec { +tcl.mkTclDerivation rec { pname = "bwidget"; version = "1.9.14"; @@ -10,21 +10,17 @@ stdenv.mkDerivation rec { }; dontBuild = true; + propagatedBuildInputs = [ tk ]; installPhase = '' - mkdir -p "$out/lib/${passthru.libPrefix}" - cp -R *.tcl lang images "$out/lib/${passthru.libPrefix}" + mkdir -p "$out/lib/bwidget${version}" + cp -R *.tcl lang images "$out/lib/bwidget${version}" ''; - passthru = { - libPrefix = "bwidget${version}"; - }; - - buildInputs = [ tcl ]; - meta = { homepage = "https://sourceforge.net/projects/tcllib"; description = "High-level widget set for Tcl/Tk"; + maintainers = with lib.maintainers; [ agbrooks ]; license = lib.licenses.tcltk; platforms = lib.platforms.linux; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/cglm/default.nix b/third_party/nixpkgs/pkgs/development/libraries/cglm/default.nix new file mode 100644 index 0000000000..a1c90f6b46 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/cglm/default.nix @@ -0,0 +1,27 @@ +{ lib +, stdenv +, fetchFromGitHub +, cmake +}: + +stdenv.mkDerivation rec { + pname = "cglm"; + version = "0.8.3"; + + src = fetchFromGitHub { + owner = "recp"; + repo = "cglm"; + rev = "v${version}"; + sha256 = "0crzkxan3kivyah225md5c65zglg5c1cgrsmwhvp51hmrpmxss5v"; + }; + + nativeBuildInputs = [ cmake ]; + + meta = with lib; { + homepage = "https://github.com/recp/cglm"; + description = "Highly Optimized Graphics Math (glm) for C"; + license = licenses.mit; + maintainers = [ maintainers.ivar ]; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/clanlib/default.nix b/third_party/nixpkgs/pkgs/development/libraries/clanlib/default.nix index 15fd9cd728..0a0f976e0d 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/clanlib/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/clanlib/default.nix @@ -10,7 +10,7 @@ , freetype , fontconfig , xlibsWrapper -, alsaLib +, alsa-lib , libXrender }: @@ -36,7 +36,7 @@ stdenv.mkDerivation rec { freetype fontconfig xlibsWrapper - alsaLib + alsa-lib libXrender ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/cmark/default.nix b/third_party/nixpkgs/pkgs/development/libraries/cmark/default.nix index 6061fd8f91..ec90d0086c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/cmark/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/cmark/default.nix @@ -1,18 +1,26 @@ { lib, stdenv, fetchFromGitHub, cmake }: stdenv.mkDerivation rec { - version = "0.29.0"; pname = "cmark"; + version = "0.30.0"; src = fetchFromGitHub { owner = "jgm"; - repo = "cmark"; + repo = pname; rev = version; - sha256 = "0r7jpqhgnssq444i8pwji2g36058vfzwkl70wbiwj13h4w5rfc8f"; + sha256 = "sha256-SU31kJL+8wt57bGW5fNeXjXPgPeCXZIknZwDxMXCfdc="; }; nativeBuildInputs = [ cmake ]; + + cmakeFlags = [ + # https://github.com/commonmark/cmark/releases/tag/0.30.0 + # recommends distributions dynamically link + "-DCMARK_STATIC=OFF" + ]; + doCheck = !stdenv.isDarwin; + preCheck = '' export LD_LIBRARY_PATH=$(readlink -f ./src) ''; diff --git a/third_party/nixpkgs/pkgs/development/libraries/cpp-utilities/default.nix b/third_party/nixpkgs/pkgs/development/libraries/cpp-utilities/default.nix index 14e2c8878f..de7bf560d3 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/cpp-utilities/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/cpp-utilities/default.nix @@ -7,13 +7,13 @@ stdenv.mkDerivation rec { pname = "cpp-utilities"; - version = "5.10.3"; + version = "5.10.4"; src = fetchFromGitHub { owner = "Martchus"; repo = pname; rev = "v${version}"; - sha256 = "sha256-bEdDRvm5W12wJnW4xC+AcRLevZ0H7C625eknKzNrLLU="; + sha256 = "sha256-pZh/NbTzQR2kjMeauv1HcRn0hDBaCNRbaZ3+1qs5rxU="; }; nativeBuildInputs = [ cmake ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/dav1d/default.nix b/third_party/nixpkgs/pkgs/development/libraries/dav1d/default.nix index 51df5a9254..fe6926fe80 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/dav1d/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/dav1d/default.nix @@ -10,14 +10,14 @@ assert useVulkan -> withExamples; stdenv.mkDerivation rec { pname = "dav1d"; - version = "0.8.2"; + version = "0.9.0"; src = fetchFromGitLab { domain = "code.videolan.org"; owner = "videolan"; repo = pname; rev = version; - sha256 = "0plmnxpz66yv3nqv1kgbyyfnwfqi9dqs0zbsdj488i6464a1m6si"; + sha256 = "0ki3wlyaqr80gl1srbbd18dd5bs1sl9icxym8ar62abpvgzxl5yk"; }; nativeBuildInputs = [ meson ninja nasm pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/dbus-glib/default.nix b/third_party/nixpkgs/pkgs/development/libraries/dbus-glib/default.nix index f56a1eaac2..0bab4eb194 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/dbus-glib/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/dbus-glib/default.nix @@ -3,11 +3,11 @@ }: stdenv.mkDerivation rec { - name = "dbus-glib-0.110"; + name = "dbus-glib-0.112"; src = fetchurl { url = "${meta.homepage}/releases/dbus-glib/${name}.tar.gz"; - sha256 = "09g8swvc95bk1z6j8sw463p2v0dqmgm2zjfndf7i8sbcyq67dr3w"; + sha256 = "sha256-fVUNzN/NKG4ziVUBgp7Zce62XGFOc6rbSgiu73GbFDo="; }; outputs = [ "out" "dev" "devdoc" ]; @@ -29,7 +29,7 @@ stdenv.mkDerivation rec { meta = { homepage = "https://dbus.freedesktop.org"; - license = with lib.licenses; [ afl21 gpl2 ]; + license = with lib.licenses; [ afl21 gpl2Plus ]; description = "Obsolete glib bindings for D-Bus lightweight IPC mechanism"; maintainers = [ ]; platforms = lib.platforms.unix; diff --git a/third_party/nixpkgs/pkgs/development/libraries/dbus/default.nix b/third_party/nixpkgs/pkgs/development/libraries/dbus/default.nix index e9543fd95f..1d1df0d24f 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/dbus/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/dbus/default.nix @@ -67,7 +67,7 @@ stdenv.mkDerivation rec { libICE libSM ] ++ lib.optional enableSystemd systemd - ++ lib.optionals (!stdenv.isDarwin) [ audit libapparmor ]; + ++ lib.optionals stdenv.isLinux [ audit libapparmor ]; # ToDo: optional selinux? configureFlags = [ @@ -84,7 +84,7 @@ stdenv.mkDerivation rec { "--with-systemdsystemunitdir=${placeholder "out"}/etc/systemd/system" "--with-systemduserunitdir=${placeholder "out"}/etc/systemd/user" ] ++ lib.optional (!x11Support) "--without-x" - ++ lib.optionals (!stdenv.isDarwin) [ "--enable-apparmor" "--enable-libaudit" ]; + ++ lib.optionals stdenv.isLinux [ "--enable-apparmor" "--enable-libaudit" ]; # Enable X11 autolaunch support in libdbus. This doesn't actually depend on X11 # (it just execs dbus-launch in dbus.tools), contrary to what the configure script demands. diff --git a/third_party/nixpkgs/pkgs/development/libraries/drogon/default.nix b/third_party/nixpkgs/pkgs/development/libraries/drogon/default.nix new file mode 100644 index 0000000000..01b4bf16ff --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/drogon/default.nix @@ -0,0 +1,64 @@ +{ stdenv, fetchFromGitHub, cmake, jsoncpp, libossp_uuid, zlib, openssl, lib +# miscellaneous +, brotli, c-ares +# databases +, sqliteSupport ? true, sqlite +, postgresSupport ? false, postgresql +, redisSupport ? false, hiredis +, mysqlSupport ? false, libmysqlclient, mariadb }: + +stdenv.mkDerivation rec { + pname = "drogon"; + version = "1.7.1"; + + src = fetchFromGitHub { + owner = "an-tao"; + repo = "drogon"; + rev = "v${version}"; + sha256 = "0rhwbz3m5x3vy5zllfs8r347wqprg29pff5q7i53f25bh8y0n49i"; + fetchSubmodules = true; + }; + + nativeBuildInputs = [ cmake ]; + + cmakeFlags = [ + "-DBUILD_TESTING=${if doInstallCheck then "ON" else "OFF"}" + "-DBUILD_EXAMPLES=OFF" + ]; + + propagatedBuildInputs = [ + jsoncpp + libossp_uuid + zlib + openssl + brotli + c-ares + ] ++ lib.optional sqliteSupport sqlite + ++ lib.optional postgresSupport postgresql + ++ lib.optional redisSupport hiredis + # drogon uses mariadb for mysql (see https://github.com/an-tao/drogon/wiki/ENG-02-Installation#Library-Dependencies) + ++ lib.optional mysqlSupport [ libmysqlclient mariadb ]; + + patches = [ + # this part of the test would normally fail because it attempts to configure a CMake project that uses find_package on itself + # this patch makes drogon and trantor visible to the test + ./fix_find_package.patch + ]; + + # modifying PATH here makes drogon_ctl visible to the test + installCheckPhase = '' + cd .. + patchShebangs test.sh + PATH=$PATH:$out/bin ./test.sh + ''; + + doInstallCheck = true; + + meta = with lib; { + homepage = "https://github.com/an-tao/drogon"; + description = "C++14/17 based HTTP web application framework"; + license = licenses.mit; + maintainers = [ maintainers.urlordjames ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/drogon/fix_find_package.patch b/third_party/nixpkgs/pkgs/development/libraries/drogon/fix_find_package.patch new file mode 100644 index 0000000000..b76dbfe488 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/drogon/fix_find_package.patch @@ -0,0 +1,13 @@ +diff --git a/test.sh b/test.sh +index f017b9a..027031e 100755 +--- a/test.sh ++++ b/test.sh +@@ -135,7 +135,7 @@ if [ $os = "windows" ]; then + conan install $src_dir -s compiler="Visual Studio" -s compiler.version=16 -sbuild_type=Debug -g cmake_paths + cmake_gen="$cmake_gen -DCMAKE_TOOLCHAIN_FILE=conan_paths.cmake -DCMAKE_INSTALL_PREFIX=$src_dir/install" + fi +-cmake .. $cmake_gen ++cmake .. $cmake_gen -DDrogon_DIR=$out/lib/cmake/Drogon -DTrantor_DIR=$out/lib/cmake/Trantor + + if [ $? -ne 0 ]; then + echo "Failed to run CMake for example project" diff --git a/third_party/nixpkgs/pkgs/development/libraries/drumstick/default.nix b/third_party/nixpkgs/pkgs/development/libraries/drumstick/default.nix index fb0d6afc71..ba3768227f 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/drumstick/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/drumstick/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl , cmake, docbook_xml_dtd_45, docbook_xsl, doxygen, graphviz-nox, pkg-config, qttools, wrapQtAppsHook -, alsaLib, fluidsynth, qtbase, qtsvg, libpulseaudio +, alsa-lib, fluidsynth, qtbase, qtsvg, libpulseaudio }: stdenv.mkDerivation rec { @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib fluidsynth libpulseaudio qtbase qtsvg + alsa-lib fluidsynth libpulseaudio qtbase qtsvg ]; cmakeFlags = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/dssi/default.nix b/third_party/nixpkgs/pkgs/development/libraries/dssi/default.nix index 9ce487b1b0..ca7ea10aff 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/dssi/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/dssi/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, ladspaH, libjack2, liblo, alsaLib, qt4, libX11, libsndfile, libSM +{ lib, stdenv, fetchurl, ladspaH, libjack2, liblo, alsa-lib, qt4, libX11, libsndfile, libSM , libsamplerate, libtool, autoconf, automake, xorgproto, libICE, pkg-config }: @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { }; buildInputs = - [ ladspaH libjack2 liblo alsaLib qt4 libX11 libsndfile libSM + [ ladspaH libjack2 liblo alsa-lib qt4 libX11 libsndfile libSM libsamplerate libtool autoconf automake xorgproto libICE pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/exiv2/default.nix b/third_party/nixpkgs/pkgs/development/libraries/exiv2/default.nix index 9d29afd692..2a394f8279 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/exiv2/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/exiv2/default.nix @@ -1,6 +1,5 @@ { lib, stdenv , fetchFromGitHub -, fetchpatch , zlib , expat , cmake @@ -15,7 +14,7 @@ stdenv.mkDerivation rec { pname = "exiv2"; - version = "0.27.3"; + version = "0.27.4"; outputs = [ "out" "dev" "doc" "man" ]; @@ -23,30 +22,9 @@ stdenv.mkDerivation rec { owner = "exiv2"; repo = "exiv2"; rev = "v${version}"; - sha256 = "0d294yhcdw8ziybyd4rp5hzwknzik2sm0cz60ff7fljacv75bjpy"; + sha256 = "0m1x79q6i5fw3gr9k0dw0bbl7ym27g9vbmxiamks6yw028xqwc5a"; }; - patches = [ - # Fix aarch64 build https://github.com/Exiv2/exiv2/pull/1271 - (fetchpatch { - name = "cmake-fix-aarch64.patch"; - url = "https://github.com/Exiv2/exiv2/commit/bbe0b70840cf28b7dd8c0b7e9bb1b741aeda2efd.patch"; - sha256 = "13zw1mn0ag0jrz73hqjhdsh1img7jvj5yddip2k2sb5phy04rzfx"; - }) - - # Use correct paths with multiple outputs - # https://github.com/Exiv2/exiv2/pull/1275 - (fetchpatch { - url = "https://github.com/Exiv2/exiv2/commit/48f2c9dbbacc0ef84c8ebf4cb1a603327f0b8750.patch"; - sha256 = "vjB3+Ld4c/2LT7nq6uatYwfHTh+HeU5QFPFXuNLpIPA="; - }) - # https://github.com/Exiv2/exiv2/pull/1294 - (fetchpatch { - url = "https://github.com/Exiv2/exiv2/commit/306c8a6fd4ddd70e76043ab255734720829a57e8.patch"; - sha256 = "0D/omxYxBPGUu3uSErlf48dc6Ukwc2cEN9/J3e7a9eU="; - }) - ]; - nativeBuildInputs = [ cmake doxygen diff --git a/third_party/nixpkgs/pkgs/development/libraries/expat/default.nix b/third_party/nixpkgs/pkgs/development/libraries/expat/default.nix index ba9fb2b177..fe30b701ed 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/expat/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/expat/default.nix @@ -5,14 +5,13 @@ # cgit) that are needed here should be included directly in Nixpkgs as # files. -let - version = "2.2.10"; -in stdenv.mkDerivation rec { - name = "expat-${version}"; +stdenv.mkDerivation rec { + pname = "expat"; + version = "2.4.1"; src = fetchurl { - url = "https://github.com/libexpat/libexpat/releases/download/R_${lib.replaceStrings ["."] ["_"] version}/${name}.tar.xz"; - sha256 = "sha256-Xf5Tj4tbY/A+mO2sUg19mmpNIuSC5cltTQb8xUhcJfI="; + url = "https://github.com/libexpat/libexpat/releases/download/R_${lib.replaceStrings ["."] ["_"] version}/${pname}-${version}.tar.xz"; + sha256 = "sha256-zwMtDbqbkoY2VI4ysyei1msaq2PE9KE90TLC0dLy+2o="; }; outputs = [ "out" "dev" ]; # TODO: fix referrers @@ -25,12 +24,11 @@ in stdenv.mkDerivation rec { doCheck = true; # not cross; preCheck = '' - patchShebangs ./run.sh - patchShebangs ./test-driver-wrapper.sh + patchShebangs ./configure ./run.sh ./test-driver-wrapper.sh ''; meta = with lib; { - homepage = "http://www.libexpat.org/"; + homepage = "https://libexpat.github.io/"; description = "A stream-oriented XML parser library written in C"; platforms = platforms.all; license = licenses.mit; # expat version diff --git a/third_party/nixpkgs/pkgs/development/libraries/fcft/default.nix b/third_party/nixpkgs/pkgs/development/libraries/fcft/default.nix index c431e6e2b3..9018a1bfa2 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/fcft/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/fcft/default.nix @@ -6,11 +6,11 @@ stdenv.mkDerivation rec { pname = "fcft"; - version = "2.4.0"; + version = "2.4.1"; src = fetchzip { url = "https://codeberg.org/dnkl/fcft/archive/${version}.tar.gz"; - sha256 = "0z1r0s5s3dr1g4f3ylxfcmy3xb0ax02rw9mg7z8hzh0gxazrpndx"; + sha256 = "sha256-QxAp6pnZPLPwarurbKovz0BVOO4XdckBzjB65XCBPAM="; }; nativeBuildInputs = [ pkg-config meson ninja scdoc ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/ffmpeg-full/default.nix b/third_party/nixpkgs/pkgs/development/libraries/ffmpeg-full/default.nix index dcd1388143..98d8ef434e 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/ffmpeg-full/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/ffmpeg-full/default.nix @@ -47,7 +47,7 @@ /* * External libraries options */ -, alsaLib ? null # Alsa in/output support +, alsa-lib ? null # Alsa in/output support #, avisynth ? null # Support for reading AviSynth scripts , bzip2 ? null , celt ? null # CELT decoder @@ -433,7 +433,7 @@ stdenv.mkDerivation rec { ++ optionals nonfreeLicensing [ fdk_aac openssl ] ++ optional ((isLinux || isFreeBSD) && libva != null) libva ++ optional (!isAarch64 && libvmaf != null && version3Licensing) libvmaf - ++ optionals isLinux [ alsaLib libraw1394 libv4l vulkan-loader glslang ] + ++ optionals isLinux [ alsa-lib libraw1394 libv4l vulkan-loader glslang ] ++ optional (isLinux && !isAarch64 && libmfx != null) libmfx ++ optional nvenc nv-codec-headers ++ optionals stdenv.isDarwin [ Cocoa CoreServices CoreAudio AVFoundation diff --git a/third_party/nixpkgs/pkgs/development/libraries/ffmpeg/generic.nix b/third_party/nixpkgs/pkgs/development/libraries/ffmpeg/generic.nix index 7e4a6a0809..d52abd4ab0 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/ffmpeg/generic.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/ffmpeg/generic.nix @@ -1,5 +1,5 @@ { lib, stdenv, buildPackages, fetchurl, pkg-config, addOpenGLRunpath, perl, texinfo, yasm -, alsaLib, bzip2, fontconfig, freetype, gnutls, libiconv, lame, libass, libogg +, alsa-lib, bzip2, fontconfig, freetype, gnutls, libiconv, lame, libass, libogg , libssh, libtheora, libva, libdrm, libvorbis, libvpx, xz, libpulseaudio, soxr , x264, x265, xvidcore, zlib, libopus, speex, nv-codec-headers, dav1d , openglSupport ? false, libGLU ? null, libGL ? null @@ -179,7 +179,7 @@ stdenv.mkDerivation rec { ++ optionals (!isDarwin && !isAarch32) [ libpulseaudio ] # Need to be fixed on Darwin and ARM ++ optional ((isLinux || isFreeBSD) && !isAarch32) libva ++ optional ((isLinux || isFreeBSD) && !isAarch32) libdrm - ++ optional isLinux alsaLib + ++ optional isLinux alsa-lib ++ optionals isDarwin darwinFrameworks ++ optional vdpauSupport libvdpau ++ optional sdlSupport (if reqMin "3.2" then SDL2 else SDL) diff --git a/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/1.12.nix b/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/1.12.nix new file mode 100644 index 0000000000..df2980ba20 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/1.12.nix @@ -0,0 +1,26 @@ +{ callPackage, fetchpatch, lib, stdenv }: + +callPackage ./generic.nix { + version = "1.12.0"; + sha256 = "0f7xd66vc1lzjbn7jzd5kyqrgxpsfxi4zc7iymhb5xrwyxipjl1g"; + + patches = [ + (fetchpatch { + # Fixed a compilation error with GCC 10.0 to 11.0. June 1, 2020. + # Should be included in the next release after 1.12.0 + url = "https://github.com/google/flatbuffers/commit/988164f6e1675bbea9c852e2d6001baf4d1fcf59.patch"; + sha256 = "0d8c2bywqmkhdi0a41cry85wy4j58pl0vd6h5xpfqm3fr8w0mi9s"; + excludes = [ "src/idl_gen_cpp.cpp" ]; + }) + (fetchpatch { + # Fixed a compilation error with GCC 10.0 to 11.0. July 6, 2020. + # Should be included in the next release after 1.12.0 + url = "https://github.com/google/flatbuffers/pull/6020/commits/44c7a4cf439b0a298720b5a448bcc243a882b0c9.patch"; + sha256 = "126xwkvnlc4ignjhxv9jygfd9j6kr1jx39hyk0ddpcmvzfqsccf4"; + }) + ]; + + preConfigure = lib.optional stdenv.buildPlatform.isDarwin '' + rm BUILD + ''; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/2.0.nix b/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/2.0.nix new file mode 100644 index 0000000000..2b907e77c4 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/2.0.nix @@ -0,0 +1,6 @@ +{ callPackage }: + +callPackage ./generic.nix { + version = "2.0.0"; + sha256 = "1zbf6bdpps8369r1ql00irxrp58jnalycc8jcapb8iqg654vlfz8"; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/default.nix b/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/default.nix deleted file mode 100644 index 374203556a..0000000000 --- a/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/default.nix +++ /dev/null @@ -1,55 +0,0 @@ -{ lib, stdenv, fetchFromGitHub, fetchpatch, cmake }: - -stdenv.mkDerivation rec { - pname = "flatbuffers"; - version = "1.12.0"; - - src = fetchFromGitHub { - owner = "google"; - repo = "flatbuffers"; - rev = "v${version}"; - sha256 = "0f7xd66vc1lzjbn7jzd5kyqrgxpsfxi4zc7iymhb5xrwyxipjl1g"; - }; - patches = [ - (fetchpatch { - # Fixed a compilation error with GCC 10.0 to 11.0. June 1, 2020. - # Should be included in the next release after 1.12.0 - url = "https://github.com/google/flatbuffers/commit/988164f6e1675bbea9c852e2d6001baf4d1fcf59.patch"; - sha256 = "0d8c2bywqmkhdi0a41cry85wy4j58pl0vd6h5xpfqm3fr8w0mi9s"; - excludes = [ "src/idl_gen_cpp.cpp" ]; - }) - (fetchpatch { - # Fixed a compilation error with GCC 10.0 to 11.0. July 6, 2020. - # Should be included in the next release after 1.12.0 - url = "https://github.com/google/flatbuffers/pull/6020/commits/44c7a4cf439b0a298720b5a448bcc243a882b0c9.patch"; - sha256 = "126xwkvnlc4ignjhxv9jygfd9j6kr1jx39hyk0ddpcmvzfqsccf4"; - }) - ]; - - preConfigure = lib.optional stdenv.buildPlatform.isDarwin '' - rm BUILD - ''; - - nativeBuildInputs = [ cmake ]; - - cmakeFlags = [ "-DFLATBUFFERS_BUILD_TESTS=${if doCheck then "ON" else "OFF"}" ]; - - # tests fail to compile - doCheck = false; - # doCheck = stdenv.hostPlatform == stdenv.buildPlatform; - checkTarget = "test"; - - meta = with lib; { - description = "Memory Efficient Serialization Library"; - longDescription = '' - FlatBuffers is an efficient cross platform serialization library for - games and other memory constrained apps. It allows you to directly - access serialized data without unpacking/parsing it first, while still - having great forwards/backwards compatibility. - ''; - maintainers = [ maintainers.teh ]; - license = licenses.asl20; - platforms = platforms.unix; - homepage = "https://google.github.io/flatbuffers/"; - }; -} diff --git a/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/generic.nix b/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/generic.nix new file mode 100644 index 0000000000..1cdfb4b9c8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/flatbuffers/generic.nix @@ -0,0 +1,46 @@ +{ lib +, stdenv +, fetchFromGitHub +, cmake +, version +, sha256 +, patches ? [ ] +, preConfigure ? null +}: + +stdenv.mkDerivation rec { + pname = "flatbuffers"; + inherit version; + + src = fetchFromGitHub { + owner = "google"; + repo = "flatbuffers"; + rev = "v${version}"; + inherit sha256; + }; + + inherit patches preConfigure; + + nativeBuildInputs = [ cmake ]; + + cmakeFlags = [ + "-DFLATBUFFERS_BUILD_TESTS=${if doCheck then "ON" else "OFF"}" + ]; + + doCheck = stdenv.hostPlatform == stdenv.buildPlatform; + checkTarget = "test"; + + meta = with lib; { + description = "Memory Efficient Serialization Library"; + longDescription = '' + FlatBuffers is an efficient cross platform serialization library for + games and other memory constrained apps. It allows you to directly + access serialized data without unpacking/parsing it first, while still + having great forwards/backwards compatibility. + ''; + maintainers = [ maintainers.teh ]; + license = licenses.asl20; + platforms = platforms.unix; + homepage = "https://google.github.io/flatbuffers/"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/flite/default.nix b/third_party/nixpkgs/pkgs/development/libraries/flite/default.nix index a80c317b06..cd8eb53846 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/flite/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/flite/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, alsaLib, fetchpatch }: +{ lib, stdenv, fetchFromGitHub, alsa-lib, fetchpatch }: stdenv.mkDerivation rec { pname = "flite"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { sha256 = "1n0p81jzndzc1rzgm66kw9ls189ricy5v1ps11y0p2fk1p56kbjf"; }; - buildInputs = lib.optionals stdenv.isLinux [ alsaLib ]; + buildInputs = lib.optionals stdenv.isLinux [ alsa-lib ]; # https://github.com/festvox/flite/pull/60. # Replaces `ar` with `$(AR)` in config/common_make_rules. diff --git a/third_party/nixpkgs/pkgs/development/libraries/gdcm/default.nix b/third_party/nixpkgs/pkgs/development/libraries/gdcm/default.nix index 75ce95e0e4..86d80a529d 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/gdcm/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/gdcm/default.nix @@ -1,40 +1,45 @@ -{ lib, stdenv, fetchurl, cmake, vtk_7, darwin -, enablePython ? false, python ? null, swig ? null}: +{ lib +, stdenv +, fetchFromGitHub +, cmake +, enableVTK ? true +, vtk +, ApplicationServices +, Cocoa +, enablePython ? false +, python +, swig +}: stdenv.mkDerivation rec { - version = "3.0.8"; pname = "gdcm"; + version = "3.0.9"; - src = fetchurl { - url = "mirror://sourceforge/gdcm/${pname}-${version}.tar.bz2"; - sha256 = "1q9p0r7wszn51yak9wdp61fd9i0wj3f8ja2frmhk7d1gxic7j1rk"; + src = fetchFromGitHub { + owner = "malaterre"; + repo = "GDCM"; + rev = "v${version}"; + sha256 = "sha256-wqrM8lxJM8VL+1QEdu6Gr1XWT1j9pT6gGd3yn1yokIY="; }; - dontUseCmakeBuildDir = true; - cmakeFlags = [ "-DGDCM_BUILD_APPLICATIONS=ON" "-DGDCM_BUILD_SHARED_LIBS=ON" + ] ++ lib.optionals enableVTK [ "-DGDCM_USE_VTK=ON" - ] - ++ lib.optional enablePython [ + ] ++ lib.optionals enablePython [ "-DGDCM_WRAP_PYTHON:BOOL=ON" "-DGDCM_INSTALL_PYTHONMODULE_DIR=${placeholder "out"}/${python.sitePackages}" ]; - preConfigure = '' - cmakeDir=$PWD - mkdir ../build - cd ../build - ''; - nativeBuildInputs = [ cmake ]; - buildInputs = [ vtk_7 ] - ++ lib.optional stdenv.isDarwin [ - darwin.apple_sdk.frameworks.ApplicationServices - darwin.apple_sdk.frameworks.Cocoa - ] ++ lib.optional enablePython [ swig python ]; - propagatedBuildInputs = [ ]; + + buildInputs = lib.optionals enableVTK [ + vtk + ] ++ lib.optionals stdenv.isDarwin [ + ApplicationServices + Cocoa + ] ++ lib.optionals enablePython [ swig python ]; meta = with lib; { description = "The grassroots cross-platform DICOM implementation"; @@ -44,6 +49,6 @@ stdenv.mkDerivation rec { ''; homepage = "http://gdcm.sourceforge.net/"; license = with licenses; [ bsd3 asl20 ]; - platforms = platforms.all; + maintainers = with maintainers; [ tfmoraes ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/gdk-pixbuf/default.nix b/third_party/nixpkgs/pkgs/development/libraries/gdk-pixbuf/default.nix index fd2d62a032..7f63d5f67e 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/gdk-pixbuf/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/gdk-pixbuf/default.nix @@ -22,11 +22,16 @@ , lib }: +let + withGtkDoc = stdenv.buildPlatform == stdenv.hostPlatform; +in stdenv.mkDerivation rec { pname = "gdk-pixbuf"; version = "2.42.6"; - outputs = [ "out" "dev" "man" "devdoc" "installedTests" ]; + outputs = [ "out" "dev" "man" ] + ++ lib.optional withGtkDoc "devdoc" + ++ lib.optional (stdenv.buildPlatform == stdenv.hostPlatform) "installedTests"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; @@ -63,8 +68,8 @@ stdenv.mkDerivation rec { ]; mesonFlags = [ - "-Dgtk_doc=true" - "-Dintrospection=${if gobject-introspection != null then "enabled" else "disabled"}" + "-Dgtk_doc=${lib.boolToString withGtkDoc}" + "-Dintrospection=${if (stdenv.buildPlatform == stdenv.hostPlatform) then "enabled" else "disabled"}" "-Dgio_sniffing=false" ]; @@ -85,9 +90,6 @@ stdenv.mkDerivation rec { moveToOutput "bin" "$dev" moveToOutput "bin/gdk-pixbuf-thumbnailer" "$out" - # So that devhelp can find this. - mkdir -p "$devdoc/share/devhelp" - mv "$out/share/doc" "$devdoc/share/devhelp/books" '' + lib.optionalString stdenv.isDarwin '' # meson erroneously installs loaders with .dylib extension on Darwin. # Their @rpath has to be replaced before gdk-pixbuf-query-loaders looks at them. @@ -98,6 +100,10 @@ stdenv.mkDerivation rec { '' + lib.optionalString (stdenv.hostPlatform == stdenv.buildPlatform) '' # We need to install 'loaders.cache' in lib/gdk-pixbuf-2.0/2.10.0/ $dev/bin/gdk-pixbuf-query-loaders --update-cache + '' + lib.optionalString withGtkDoc '' + # So that devhelp can find this. + mkdir -p "$devdoc/share/devhelp" + mv "$out/share/doc" "$devdoc/share/devhelp/books" ''; # The fixDarwinDylibNames hook doesn't patch binaries. diff --git a/third_party/nixpkgs/pkgs/development/libraries/gensio/default.nix b/third_party/nixpkgs/pkgs/development/libraries/gensio/default.nix index a0c4f5a3e2..3978c05f2c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/gensio/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/gensio/default.nix @@ -8,13 +8,13 @@ stdenv.mkDerivation rec { pname = "gensio"; - version = "2.2.5"; + version = "2.2.7"; src = fetchFromGitHub { owner = "cminyard"; repo = pname; rev = "v${version}"; - sha256 = "sha256-QC07NGgZa++qHyGZY3fjosjJVuRFfc7HYmdGxQHAz4s="; + sha256 = "sha256-2wxsPHrQ9GgyUE4p6zYuR1mPU2OyjtgiPnMApEscR2g="; }; passthru = { diff --git a/third_party/nixpkgs/pkgs/development/libraries/glibc/2.32-master.patch.gz b/third_party/nixpkgs/pkgs/development/libraries/glibc/2.32-master.patch.gz index 2fda429413..8ea998b5be 100644 Binary files a/third_party/nixpkgs/pkgs/development/libraries/glibc/2.32-master.patch.gz and b/third_party/nixpkgs/pkgs/development/libraries/glibc/2.32-master.patch.gz differ diff --git a/third_party/nixpkgs/pkgs/development/libraries/glibc/common.nix b/third_party/nixpkgs/pkgs/development/libraries/glibc/common.nix index 3597dd70f2..93f8f7a864 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/glibc/common.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/glibc/common.nix @@ -42,7 +42,7 @@ let version = "2.32"; - patchSuffix = "-46"; + patchSuffix = "-48"; sha256 = "0di848ibffrnwq7g2dvgqrnn4xqhj3h96csn69q4da51ymafl9qn"; in @@ -61,7 +61,7 @@ stdenv.mkDerivation ({ [ /* No tarballs for stable upstream branch, only https://sourceware.org/git/glibc.git and using git would complicate bootstrapping. $ git fetch --all -p && git checkout origin/release/2.32/master && git describe - glibc-2.32-46-g1799ac8eab + glibc-2.32-48-g16949aeaa0 $ git show --minimal --reverse glibc-2.32.. | gzip -9n --rsyncable - > 2.32-master.patch.gz To compare the archive contents zdiff can be used. @@ -153,6 +153,8 @@ stdenv.mkDerivation ({ "--enable-add-ons" "--sysconfdir=/etc" "--enable-stackguard-randomization" + "--enable-static-pie" + "--enable-bind-now" (lib.withFeatureAs withLinuxHeaders "headers" "${linuxHeaders}/include") (lib.enableFeature profilingLibraries "profile") ] ++ lib.optionals withLinuxHeaders [ @@ -226,6 +228,28 @@ stdenv.mkDerivation ({ libc_cv_c_cleanup=yes libc_cv_gnu89_inline=yes EOF + + # ./configure has logic like + # + # AR=`$CC -print-prog-name=ar` + # + # This searches various directories in the gcc and its wrapper. In nixpkgs, + # this returns the bare string "ar", which is build ar. This can result as + # a build failure with the following message: + # + # libc_pic.a: error adding symbols: archive has no index; run ranlib to add one + # + # (Observed cross compiling from aarch64-linux -> armv7l-linux). + # + # Nixpkgs passes a correct value for AR and friends, so to use the correct + # set of tools, we only need to delete this special handling. + sed -i \ + -e '/^AR=/d' \ + -e '/^AS=/d' \ + -e '/^LD=/d' \ + -e '/^OBJCOPY=/d' \ + -e '/^OBJDUMP=/d' \ + $configureScript ''; preBuild = lib.optionalString withGd "unset NIX_DONT_SET_RPATH"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/gnutls/default.nix b/third_party/nixpkgs/pkgs/development/libraries/gnutls/default.nix index bec366b8e1..4c4094987d 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/gnutls/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/gnutls/default.nix @@ -8,23 +8,22 @@ assert guileBindings -> guile != null; let - version = "3.7.1"; # XXX: Gnulib's `test-select' fails on FreeBSD: # https://hydra.nixos.org/build/2962084/nixlog/1/raw . - doCheck = !stdenv.isFreeBSD && !stdenv.isDarwin && lib.versionAtLeast version "3.4" + doCheck = !stdenv.isFreeBSD && !stdenv.isDarwin && stdenv.buildPlatform == stdenv.hostPlatform; inherit (stdenv.hostPlatform) isDarwin; in -stdenv.mkDerivation { - name = "gnutls-${version}"; - inherit version; +stdenv.mkDerivation rec { + pname = "gnutls"; + version = "3.7.2"; src = fetchurl { - url = "mirror://gnupg/gnutls/v3.7/gnutls-${version}.tar.xz"; - sha256 = "0vxcbig87sdc73h58pmcpbi4al1zgcxid1jn67mhcpna7sbdfxrp"; + url = "mirror://gnupg/gnutls/v${lib.versions.majorMinor version}/gnutls-${version}.tar.xz"; + sha256 = "646e6c5a9a185faa4cea796d378a1ba8e1148dbb197ca6605f95986a25af2752"; }; outputs = [ "bin" "dev" "out" "man" "devdoc" ]; @@ -42,7 +41,7 @@ stdenv.mkDerivation { # - trust-store: default trust store path (/etc/ssl/...) is missing in sandbox (3.5.11) # - psk-file: no idea; it broke between 3.6.3 and 3.6.4 # Change p11-kit test to use pkg-config to find p11-kit - postPatch = lib.optionalString (lib.versionAtLeast version "3.6") '' + postPatch = '' sed '2iexit 77' -i tests/{pkgconfig,fastopen}.sh sed '/^void doit(void)/,/^{/ s/{/{ exit(77);/' -i tests/{trust-store,psk-file}.c sed 's:/usr/lib64/pkcs11/ /usr/lib/pkcs11/ /usr/lib/x86_64-linux-gnu/pkcs11/:`pkg-config --variable=p11_module_path p11-kit-1`:' -i tests/p11-kit-trust.sh @@ -112,7 +111,7 @@ stdenv.mkDerivation { tampering, or message forgery." ''; - homepage = "https://www.gnu.org/software/gnutls/"; + homepage = "https://gnutls.org/"; license = licenses.lgpl21Plus; maintainers = with maintainers; [ eelco fpletz ]; platforms = platforms.all; diff --git a/third_party/nixpkgs/pkgs/development/libraries/gnutls/fix-gnulib-tests-arm.patch b/third_party/nixpkgs/pkgs/development/libraries/gnutls/fix-gnulib-tests-arm.patch deleted file mode 100644 index 5a222a9cb8..0000000000 --- a/third_party/nixpkgs/pkgs/development/libraries/gnutls/fix-gnulib-tests-arm.patch +++ /dev/null @@ -1,45 +0,0 @@ ->From 175e0bc72808d564074c4adcc72aeadb74adfcc6 Mon Sep 17 00:00:00 2001 -From: Paul Eggert -Date: Thu, 27 Aug 2020 17:52:58 -0700 -Subject: [PATCH] perror, strerror_r: remove unportable tests - -Problem reported by Florian Weimer in: -https://lists.gnu.org/r/bug-gnulib/2020-08/msg00220.html -* tests/test-perror2.c (main): -* tests/test-strerror_r.c (main): Omit unportable tests. ---- - tests/test-perror2.c | 3 --- - tests/test-strerror_r.c | 3 --- - 2 files changed, 6 deletions(-) - -diff --git a/gl/tests/test-perror2.c b/gl/tests/test-perror2.c -index 1d14eda7b..c6214dd25 100644 ---- a/gl/tests/test-perror2.c -+++ b/gl/tests/test-perror2.c -@@ -79,9 +79,6 @@ main (void) - errno = -5; - perror (""); - ASSERT (!ferror (stderr)); -- ASSERT (msg1 == msg2 || msg1 == msg4 || STREQ (msg1, str1)); -- ASSERT (msg2 == msg4 || STREQ (msg2, str2)); -- ASSERT (msg3 == msg4 || STREQ (msg3, str3)); - ASSERT (STREQ (msg4, str4)); - - free (str1); -diff --git a/gl/tests/test-strerror_r.c b/gl/tests/test-strerror_r.c -index b11d6fd9f..c1dbcf837 100644 ---- a/gl/tests/test-strerror_r.c -+++ b/gl/tests/test-strerror_r.c -@@ -165,9 +165,6 @@ main (void) - - strerror_r (EACCES, buf, sizeof buf); - strerror_r (-5, buf, sizeof buf); -- ASSERT (msg1 == msg2 || msg1 == msg4 || STREQ (msg1, str1)); -- ASSERT (msg2 == msg4 || STREQ (msg2, str2)); -- ASSERT (msg3 == msg4 || STREQ (msg3, str3)); - ASSERT (STREQ (msg4, str4)); - - free (str1); --- -2.17.1 - diff --git a/third_party/nixpkgs/pkgs/development/libraries/goffice/default.nix b/third_party/nixpkgs/pkgs/development/libraries/goffice/default.nix index 3a48fa5248..85c9b77c6b 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/goffice/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/goffice/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "goffice"; - version = "0.10.49"; + version = "0.10.50"; outputs = [ "out" "dev" "devdoc" ]; src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "X/wY27OF7fuFtsYlS55bTLPS/6MEK5Ms286ON/SzB+k="; + sha256 = "LFw93HsIs0UkCMgbEhxfASpzSYHXXkRN68yxxY5cv9w="; }; nativeBuildInputs = [ pkg-config intltool ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/graphene/0001-meson-add-options-for-tests-installation-dirs.patch b/third_party/nixpkgs/pkgs/development/libraries/graphene/0001-meson-add-options-for-tests-installation-dirs.patch index a82a06d427..9111217ea0 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/graphene/0001-meson-add-options-for-tests-installation-dirs.patch +++ b/third_party/nixpkgs/pkgs/development/libraries/graphene/0001-meson-add-options-for-tests-installation-dirs.patch @@ -23,7 +23,7 @@ index b9a2fb5..4b8629f 100644 + value: '', + description: 'Installation directory for binary files in tests') diff --git a/tests/meson.build b/tests/meson.build -index 77281f5..c4c7fac 100644 +index 77281f5..7522456 100644 --- a/tests/meson.build +++ b/tests/meson.build @@ -21,8 +21,17 @@ unit_tests = [ @@ -71,7 +71,12 @@ index 77281f5..c4c7fac 100644 ), env: ['MUTEST_OUTPUT=tap'], protocol: 'tap', -@@ -70,13 +79,13 @@ if build_gir and host_system == 'linux' and not meson.is_cross_build() +@@ -66,17 +75,18 @@ endif + if build_gir and host_system == 'linux' and not meson.is_cross_build() + foreach unit: ['introspection.py'] + wrapper = '@0@.test'.format(unit) ++ install_data(unit, install_dir: test_bindir) + custom_target(wrapper, output: wrapper, command: [ gen_installed_test, diff --git a/third_party/nixpkgs/pkgs/development/libraries/graphene/default.nix b/third_party/nixpkgs/pkgs/development/libraries/graphene/default.nix index a9c647268a..a8e0d11798 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/graphene/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/graphene/default.nix @@ -12,6 +12,7 @@ , docbook_xsl , docbook_xml_dtd_43 , gobject-introspection +, makeWrapper }: stdenv.mkDerivation rec { @@ -41,6 +42,7 @@ stdenv.mkDerivation rec { pkg-config gobject-introspection python3 + makeWrapper ]; buildInputs = [ @@ -62,6 +64,12 @@ stdenv.mkDerivation rec { postPatch = '' patchShebangs tests/gen-installed-test.py + PATH=${python3.withPackages (pp: [ pp.pygobject3 pp.tappy ])}/bin:$PATH patchShebangs tests/introspection.py + ''; + + postFixup = '' + wrapProgram "${placeholder "installedTests"}/libexec/installed-tests/graphene-1.0/introspection.py" \ + --prefix GI_TYPELIB_PATH : "$out/lib/girepository-1.0" ''; passthru = { diff --git a/third_party/nixpkgs/pkgs/development/libraries/grpc/default.nix b/third_party/nixpkgs/pkgs/development/libraries/grpc/default.nix index 8a44c7bc13..00d3c4a563 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/grpc/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/grpc/default.nix @@ -3,13 +3,13 @@ }: stdenv.mkDerivation rec { - version = "1.38.0"; # N.B: if you change this, change pythonPackages.grpcio-tools to a matching version too + version = "1.38.1"; # N.B: if you change this, change pythonPackages.grpcio-tools to a matching version too pname = "grpc"; src = fetchFromGitHub { owner = "grpc"; repo = "grpc"; rev = "v${version}"; - sha256 = "0an903nh8lz3xlf79zsh2v55nrwnjzzavkjlrsl7j9aysgwmgn4r"; + sha256 = "0hjp946x5695srmc6bg2m7iih81jdmhpxn4bjcl80f09v4qsb0nl"; fetchSubmodules = true; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/gspell/0001-Darwin-build-fix.patch b/third_party/nixpkgs/pkgs/development/libraries/gspell/0001-Darwin-build-fix.patch new file mode 100644 index 0000000000..b2e71fe3ae --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/gspell/0001-Darwin-build-fix.patch @@ -0,0 +1,37 @@ +From 2d6dd1c286eb57fbf968510318cafc94888b98de Mon Sep 17 00:00:00 2001 +From: OPNA2608 +Date: Sun, 13 Jun 2021 21:56:03 +0200 +Subject: [PATCH] Darwin build fix + +--- + gspell/Makefile.am | 7 +++++++ + 1 file changed, 7 insertions(+) + +diff --git a/gspell/Makefile.am b/gspell/Makefile.am +index 69ee421..7c58973 100644 +--- a/gspell/Makefile.am ++++ b/gspell/Makefile.am +@@ -95,6 +95,7 @@ nodist_libgspell_core_la_SOURCES = \ + $(BUILT_SOURCES) + + libgspell_core_la_LIBADD = \ ++ $(GTK_MAC_LIBS) \ + $(CODE_COVERAGE_LIBS) + + libgspell_core_la_CFLAGS = \ +@@ -161,6 +162,12 @@ gspell_private_headers += \ + gspell_private_c_files += \ + gspell-osx.c + ++libgspell_core_la_CFLAGS += \ ++ -xobjective-c ++ ++libgspell_core_la_LDFLAGS += \ ++ -framework Cocoa ++ + endif # OS_OSX + + if HAVE_INTROSPECTION +-- +2.29.3 + diff --git a/third_party/nixpkgs/pkgs/development/libraries/gspell/default.nix b/third_party/nixpkgs/pkgs/development/libraries/gspell/default.nix index f591246eaf..be45a48090 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/gspell/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/gspell/default.nix @@ -2,6 +2,8 @@ , fetchurl , pkg-config , libxml2 +, autoreconfHook +, gtk-doc , glib , gtk3 , enchant2 @@ -9,6 +11,7 @@ , vala , gobject-introspection , gnome +, gtk-mac-integration }: stdenv.mkDerivation rec { @@ -23,17 +26,26 @@ stdenv.mkDerivation rec { sha256 = "1pdb4gbjrs8mk6r0ipw5vxyvzav1wvkjq46kiq53r3nyznfpdfyw"; }; + patches = [ + # Extracted from: https://github.com/Homebrew/homebrew-core/blob/2a27fb86b08afc7ae6dff79cf64aafb8ecc93275/Formula/gspell.rb#L125-L149 + ./0001-Darwin-build-fix.patch + ]; + nativeBuildInputs = [ pkg-config vala gobject-introspection libxml2 + autoreconfHook + gtk-doc ]; buildInputs = [ glib gtk3 icu + ] ++ lib.optionals stdenv.hostPlatform.isDarwin [ + gtk-mac-integration ]; propagatedBuildInputs = [ @@ -53,6 +65,6 @@ stdenv.mkDerivation rec { homepage = "https://wiki.gnome.org/Projects/gspell"; license = licenses.lgpl21Plus; maintainers = teams.gnome.members; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/gstreamer/base/default.nix b/third_party/nixpkgs/pkgs/development/libraries/gstreamer/base/default.nix index 7e9095ef0e..699f70a078 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/gstreamer/base/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/gstreamer/base/default.nix @@ -26,7 +26,7 @@ , wayland , wayland-protocols , enableAlsa ? stdenv.isLinux -, alsaLib +, alsa-lib # Enabling Cocoa seems to currently not work, giving compile # errors. Suspected is that a newer version than clang # is needed than 5.0 but it is not clear. @@ -84,7 +84,7 @@ stdenv.mkDerivation rec { pango OpenGL ] ++ lib.optionals enableAlsa [ - alsaLib + alsa-lib ] ++ lib.optionals enableX11 [ libXext libXv diff --git a/third_party/nixpkgs/pkgs/development/libraries/gtksourceviewmm/default.nix b/third_party/nixpkgs/pkgs/development/libraries/gtksourceviewmm/default.nix index fc4439e223..2b91240325 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/gtksourceviewmm/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/gtksourceviewmm/default.nix @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { buildInputs = [ glibmm gtkmm3 gtksourceview3 ]; meta = with lib; { - platforms = platforms.linux; + platforms = platforms.unix; homepage = "https://developer.gnome.org/gtksourceviewmm/"; description = "C++ wrapper for gtksourceview"; license = licenses.lgpl2; diff --git a/third_party/nixpkgs/pkgs/development/libraries/harfbuzz/default.nix b/third_party/nixpkgs/pkgs/development/libraries/harfbuzz/default.nix index d228752627..db142286fe 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/harfbuzz/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/harfbuzz/default.nix @@ -1,30 +1,44 @@ -{ lib, stdenv, fetchFromGitHub, pkg-config, glib, freetype, cairo, libintl -, meson, ninja +{ lib +, stdenv +, fetchFromGitHub +, pkg-config +, glib +, freetype +, fontconfig +, libintl +, meson +, ninja , gobject-introspection -, icu, graphite2, harfbuzz # The icu variant uses and propagates the non-icu one. -, ApplicationServices, CoreText +, icu +, graphite2 +, harfbuzz # The icu variant uses and propagates the non-icu one. +, ApplicationServices +, CoreText , withCoreText ? false , withIcu ? false # recommended by upstream as default, but most don't needed and it's big , withGraphite2 ? true # it is small and major distros do include it , python3 -, gtk-doc, docbook-xsl-nons, docbook_xml_dtd_43 +, gtk-doc +, docbook-xsl-nons +, docbook_xml_dtd_43 }: let - version = "2.8.0"; + version = "2.8.1"; inherit (lib) optional optionals optionalString; mesonFeatureFlag = opt: b: "-D${opt}=${if b then "enabled" else "disabled"}"; + isNativeCompilation = stdenv.buildPlatform == stdenv.hostPlatform; in stdenv.mkDerivation { name = "harfbuzz${optionalString withIcu "-icu"}-${version}"; src = fetchFromGitHub { - owner = "harfbuzz"; - repo = "harfbuzz"; - rev = version; - sha256 = "sha256-JnvOFGK2HWIpzuwgZtyt0IfKfnoXD1LMeVb3RzMmyY4="; + owner = "harfbuzz"; + repo = "harfbuzz"; + rev = version; + sha256 = "107l9jhvwy6pnq5032kr7r21md65qg09j7iikr4jihf9pvh7gn5w"; }; postPatch = '' @@ -40,9 +54,17 @@ stdenv.mkDerivation { outputBin = "dev"; mesonFlags = [ + # upstream recommends cairo, but it is only used for development purposes + # and is not part of the library. + # Cairo causes transitive (build) dependencies on various X11 or other + # GUI-related libraries, so it shouldn't be re-added lightly. + (mesonFeatureFlag "cairo" false) + # chafa is only used in a development utility, not in the library + (mesonFeatureFlag "chafa" false) + (mesonFeatureFlag "coretext" withCoreText) (mesonFeatureFlag "graphite" withGraphite2) (mesonFeatureFlag "icu" withIcu) - (mesonFeatureFlag "coretext" withCoreText) + (mesonFeatureFlag "introspection" isNativeCompilation) ]; nativeBuildInputs = [ @@ -57,11 +79,11 @@ stdenv.mkDerivation { docbook_xml_dtd_43 ]; - buildInputs = [ glib freetype cairo ] # recommended by upstream - ++ lib.optionals withCoreText [ ApplicationServices CoreText ]; + buildInputs = [ glib freetype ] + ++ lib.optionals withCoreText [ ApplicationServices CoreText ] + ++ lib.optionals isNativeCompilation [ gobject-introspection ]; - propagatedBuildInputs = [] - ++ optional withGraphite2 graphite2 + propagatedBuildInputs = optional withGraphite2 graphite2 ++ optionals withIcu [ icu harfbuzz ]; doCheck = true; diff --git a/third_party/nixpkgs/pkgs/development/libraries/hunspell/dictionaries.nix b/third_party/nixpkgs/pkgs/development/libraries/hunspell/dictionaries.nix index f1bcd4ad00..596326b36d 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/hunspell/dictionaries.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/hunspell/dictionaries.nix @@ -5,10 +5,11 @@ let mkDict = - { name, readmeFile, dictFileName, ... }@args: + { pname, readmeFile, dictFileName, ... }@args: stdenv.mkDerivation ({ - inherit name; + inherit pname; installPhase = '' + runHook preInstall # hunspell dicts install -dm755 "$out/share/hunspell" install -m644 ${dictFileName}.dic "$out/share/hunspell/" @@ -19,7 +20,7 @@ let ln -sv "$out/share/hunspell/${dictFileName}.aff" "$out/share/myspell/dicts/" # docs install -dm755 "$out/share/doc" - install -m644 ${readmeFile} $out/share/doc/${name}.txt + install -m644 ${readmeFile} $out/share/doc/${pname}.txt runHook postInstall ''; } // args); @@ -29,7 +30,7 @@ let mkDict rec { inherit dictFileName; version = "2.2"; - name = "hunspell-dict-${shortName}-rla-${version}"; + pname = "hunspell-dict-${shortName}-rla"; readmeFile = "README.txt"; src = fetchFromGitHub { owner = "sbosio"; @@ -70,7 +71,7 @@ let version = "2.40"; # Should really use a string function or something _version = "2-40"; - name = "hunspell-dict-${shortName}-dsso-${version}"; + pname = "hunspell-dict-${shortName}-dsso"; _name = "ooo_swedish_dict_${_version}"; readmeFile = "LICENSE_en_US.txt"; src = fetchurl { @@ -104,7 +105,7 @@ let ln -sv "$out/share/hunspell/${dictFileName}.aff" "$out/share/myspell/dicts/" # docs install -dm755 "$out/share/doc" - install -m644 ${readmeFile} $out/share/doc/${name}.txt + install -m644 ${readmeFile} $out/share/doc/${pname}.txt ''; }; @@ -113,7 +114,7 @@ let mkDict rec { inherit dictFileName; version = "5.3"; - name = "hunspell-dict-${shortName}-dicollecte-${version}"; + pname = "hunspell-dict-${shortName}-dicollecte"; readmeFile = "README_dict_fr.txt"; src = fetchurl { url = "http://www.dicollecte.org/download/fr/hunspell-french-dictionaries-v${version}.zip"; @@ -146,7 +147,7 @@ let mkDict rec { inherit src srcFileName dictFileName; version = "2018.04.16"; - name = "hunspell-dict-${shortName}-wordlist-${version}"; + pname = "hunspell-dict-${shortName}-wordlist"; srcReadmeFile = "README_" + srcFileName + ".txt"; readmeFile = "README_" + dictFileName + ".txt"; meta = with lib; { @@ -174,7 +175,7 @@ let mkDict rec { inherit src dictFileName; version = "2.4"; - name = "hunspell-dict-${shortName}-linguistico-${version}"; + pname = "hunspell-dict-${shortName}-linguistico"; readmeFile = dictFileName + "_README.txt"; meta = with lib; { description = "Hunspell dictionary for ${shortDescription}"; @@ -198,7 +199,7 @@ let mkDictFromXuxen = { shortName, srcs, shortDescription, longDescription, dictFileName }: stdenv.mkDerivation rec { - name = "hunspell-dict-${shortName}-xuxen-${version}"; + pname = "hunspell-dict-${shortName}-xuxen"; version = "5-2015.11.10"; inherit srcs; @@ -231,7 +232,7 @@ let mkDictFromJ3e = { shortName, shortDescription, dictFileName }: stdenv.mkDerivation rec { - name = "hunspell-dict-${shortName}-j3e-${version}"; + pname = "hunspell-dict-${shortName}-j3e"; version = "20161207"; src = fetchurl { @@ -272,7 +273,7 @@ let , readmeFile ? "README_${dictFileName}.txt" , sourceRoot ? dictFileName }: mkDict rec { - name = "hunspell-dict-${shortName}-libreoffice-${version}"; + pname = "hunspell-dict-${shortName}-libreoffice"; version = "6.3.0.4"; inherit dictFileName readmeFile; src = fetchFromGitHub { @@ -699,7 +700,7 @@ in rec { uk_UA = uk-ua; uk-ua = mkDict rec { - name = "hunspell-dict-uk-ua-${version}"; + pname = "hunspell-dict-uk-ua"; version = "4.6.3"; _version = "4-6.3"; @@ -760,7 +761,7 @@ in rec { da_DK = da-dk; da-dk = mkDict rec { - name = "hunspell-dict-da-dk-${version}"; + pname = "hunspell-dict-da-dk"; version = "2.5.189"; src = fetchurl { @@ -784,4 +785,45 @@ in rec { maintainers = with maintainers; [ louisdk1 ]; }; }; + + /* DUTCH */ + + nl_NL = nl_nl; + nl_nl = mkDict rec { + pname = "hunspell-dict-nl-nl"; + version = "2.20.19"; + + src = fetchFromGitHub { + owner = "OpenTaal"; + repo = "opentaal-hunspell"; + rev = version; + sha256 = "0jma8mmrncyzd77kxliyngs4z6z4769g3nh0a7xn2pd4s5y2xdpy"; + }; + + preInstall = '' + mv nl.aff nl_NL.aff + mv nl.dic nl_NL.dic + ''; + + dictFileName = "nl_NL"; + readmeFile = "README.md"; + + meta = with lib; { + description = "Hunspell dictionary for Dutch (Netherlands) from OpenTaal"; + homepage = "https://www.opentaal.org/"; + license = with licenses; [ bsd3 cc-by-nc-30 ]; + maintainers = with maintainers; [ artturin ]; + }; + }; + + /* HEBREW */ + + he_IL = he-il; + he-il = mkDictFromLibreOffice { + shortName = "he-il"; + dictFileName = "he_IL"; + shortDescription = "Hebrew (Israel)"; + readmeFile = "README_he_IL.txt"; + license = with lib.licenses; [ agpl3Plus ]; + }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/hwloc/default.nix b/third_party/nixpkgs/pkgs/development/libraries/hwloc/default.nix index a6fb316d65..9692ac5315 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/hwloc/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/hwloc/default.nix @@ -6,17 +6,13 @@ assert x11Support -> libX11 != null && cairo != null; with lib; -let - version = "2.4.1"; - versmm = versions.major version + "." + versions.minor version; - name = "hwloc-${version}"; - -in stdenv.mkDerivation { - inherit name; +stdenv.mkDerivation rec { + pname = "hwloc"; + version = "2.5.0"; src = fetchurl { - url = "https://www.open-mpi.org/software/hwloc/v${versmm}/downloads/${name}.tar.bz2"; - sha256 = "sha256-OSQh5p8mEgyKuV0VH+mJ8rS2nas8dzV0HE4KbX3l3mM="; + url = "https://www.open-mpi.org/software/hwloc/v${versions.majorMinor version}/downloads/hwloc-${version}.tar.bz2"; + sha256 = "1j2j9wn39a8v91r23xncm1rzls6rjkgkvdvqghbdsnq8ps491kx9"; }; configureFlags = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/igraph/default.nix b/third_party/nixpkgs/pkgs/development/libraries/igraph/default.nix index 0c668525e9..03573716fa 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/igraph/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/igraph/default.nix @@ -21,13 +21,13 @@ stdenv.mkDerivation rec { pname = "igraph"; - version = "0.9.3"; + version = "0.9.4"; src = fetchFromGitHub { owner = "igraph"; repo = pname; rev = version; - sha256 = "sha256-StRXtP2PelPcS+l5O1AOVFkza3hiKFwCdp8XLal4grE="; + sha256 = "sha256-tF+cnJRv125bSpZIpABTIHAfJO4TNfSBHjnzpNTbFgk="; }; # Normally, igraph wants us to call bootstrap.sh, which will call diff --git a/third_party/nixpkgs/pkgs/development/libraries/incrtcl/default.nix b/third_party/nixpkgs/pkgs/development/libraries/incrtcl/default.nix index 67ae5623db..dae01961a1 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/incrtcl/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/incrtcl/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, writeText, tcl }: -stdenv.mkDerivation rec { +tcl.mkTclDerivation rec { pname = "incrtcl"; version = "4.2.0"; @@ -9,18 +9,12 @@ stdenv.mkDerivation rec { sha256 = "0w28v0zaraxcq1s9pa6cihqqwqvvwfgz275lks7w4gl7hxjxmasw"; }; - buildInputs = [ tcl ]; - configureFlags = [ "--with-tcl=${tcl}/lib" ]; enableParallelBuilding = true; patchPhase = '' substituteInPlace configure --replace "\''${TCL_SRC_DIR}/generic" "${tcl}/include" ''; - preConfigure = '' - configureFlags="--exec_prefix=$prefix $configureFlags" - ''; - postInstall = '' rmdir $out/bin mv $out/lib/itcl${version}/* $out/lib diff --git a/third_party/nixpkgs/pkgs/development/libraries/intel-media-driver/default.nix b/third_party/nixpkgs/pkgs/development/libraries/intel-media-driver/default.nix index a782e08882..37375f52c3 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/intel-media-driver/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/intel-media-driver/default.nix @@ -6,13 +6,13 @@ stdenv.mkDerivation rec { pname = "intel-media-driver"; - version = "21.2.1"; + version = "21.2.2"; src = fetchFromGitHub { owner = "intel"; repo = "media-driver"; rev = "intel-media-${version}"; - sha256 = "0a49087ca3li1cbsdcwp31zlakfw9dxcr2lnxzm5s3x63jvwlbag"; + sha256 = "0cz2zr5qmhlsb1ydffakpkw9adyvn5n2y269fp0k2sskqwlykn48"; }; cmakeFlags = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/intel-media-sdk/default.nix b/third_party/nixpkgs/pkgs/development/libraries/intel-media-sdk/default.nix index 78e2ebae96..47a3ca4f9f 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/intel-media-sdk/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/intel-media-sdk/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "intel-media-sdk"; - version = "21.2.0"; + version = "21.2.2"; src = fetchFromGitHub { owner = "Intel-Media-SDK"; repo = "MediaSDK"; rev = "intel-mediasdk-${version}"; - sha256 = "sha256-LusgmvlWOMEQjy47IpA9IYcl/cUTSMmvxSwvV/ihs2g="; + sha256 = "sha256-iSrr9g6C8YRcmu92sTyDCh76Cdu8wbDL3COwiVxox4Q="; }; nativeBuildInputs = [ cmake pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/itktcl/default.nix b/third_party/nixpkgs/pkgs/development/libraries/itktcl/default.nix index 570190a43c..66039c61b4 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/itktcl/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/itktcl/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, tcl, tk, incrtcl }: -stdenv.mkDerivation rec { +tcl.mkTclDerivation rec { pname = "itk-tcl"; version = "4.1.0"; @@ -9,11 +9,10 @@ stdenv.mkDerivation rec { sha256 = "1iy964jfgsfnc1agk1w6bbm44x18ily8d4wmr7cc9z9f4acn2r6s"; }; - buildInputs = [ tcl tk incrtcl ]; + buildInputs = [ tk incrtcl ]; enableParallelBuilding = true; configureFlags = [ - "--with-tcl=${tcl}/lib" "--with-tk=${tk}/lib" "--with-itcl=${incrtcl}/lib" "--with-tkinclude=${tk.dev}/include" diff --git a/third_party/nixpkgs/pkgs/development/libraries/kde-frameworks/kimageformats.nix b/third_party/nixpkgs/pkgs/development/libraries/kde-frameworks/kimageformats.nix index 3d9c5851f2..4ad3ba7410 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/kde-frameworks/kimageformats.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/kde-frameworks/kimageformats.nix @@ -1,15 +1,24 @@ { - mkDerivation, lib, + mkDerivation, lib, fetchpatch, extra-cmake-modules, - ilmbase, karchive, openexr, qtbase + ilmbase, karchive, openexr, libavif, qtbase }: let inherit (lib) getDev; in mkDerivation { name = "kimageformats"; + + patches = [ + (fetchpatch { # included in kimageformats >= 5.83 + name = "avif-0.9.2.diff"; + url = "https://invent.kde.org/frameworks/kimageformats/-/commit/bf3f94da766d66a0470ab744dbe1ced4697b572d.diff"; + sha256 = "18d67l5kj9sv88jdpi061k9rl3adzkx9l51ng7saylrkfddwc3ig"; + }) + ]; + nativeBuildInputs = [ extra-cmake-modules ]; - buildInputs = [ karchive openexr qtbase ]; + buildInputs = [ karchive openexr libavif qtbase ]; outputs = [ "out" ]; # plugins only CXXFLAGS = "-I${getDev ilmbase}/include/OpenEXR"; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/kyotocabinet/default.nix b/third_party/nixpkgs/pkgs/development/libraries/kyotocabinet/default.nix index 4e8aa57d95..153892304e 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/kyotocabinet/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/kyotocabinet/default.nix @@ -1,11 +1,12 @@ { lib, stdenv, fetchurl, zlib }: stdenv.mkDerivation rec { - name = "kyotocabinet-1.2.76"; + pname = "kyotocabinet"; + version = "1.2.79"; src = fetchurl { - url = "http://fallabs.com/kyotocabinet/pkg/${name}.tar.gz"; - sha256 = "0g6js20x7vnpq4p8ghbw3mh9wpqksya9vwhzdx6dnlf354zjsal1"; + url = "https://dbmx.net/kyotocabinet/pkg/kyotocabinet-${version}.tar.gz"; + sha256 = "079ymsahlrijswgwfr2la9yw5h57l752cprhp5dz31iamsj1vyv7"; }; prePatch = lib.optionalString stdenv.isDarwin '' @@ -24,18 +25,12 @@ stdenv.mkDerivation rec { --replace stdc++ c++ ''; - patches = [(fetchurl { - name = "gcc6.patch"; - url = "https://src.fedoraproject.org/rpms/kyotocabinet/raw/master/f/kyotocabinet-1.2.76-gcc6.patch"; - sha256 = "1h5k38mkiq7lz8nd2gbn7yvimcz49g3z7phn1cr560bzjih8rz23"; - })]; - buildInputs = [ zlib ]; meta = with lib; { - homepage = "http://fallabs.com/kyotocabinet"; + homepage = "https://dbmx.net/kyotocabinet"; description = "A library of routines for managing a database"; - license = licenses.gpl3; + license = licenses.gpl3Plus; platforms = platforms.all; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/leatherman/default.nix b/third_party/nixpkgs/pkgs/development/libraries/leatherman/default.nix index 61d87211e0..2d439db593 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/leatherman/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/leatherman/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { pname = "leatherman"; - version = "1.12.4"; + version = "1.12.5"; src = fetchFromGitHub { - sha256 = "sha256-7e9D9Q3CAm+2+0vl81djSZwKrQRXc5UxcbJVMt91/vU="; + sha256 = "sha256-1romJiOIQDlglo/nAJjn1l06dSwDRwG1b49H6js9MB4="; rev = version; repo = "leatherman"; owner = "puppetlabs"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/leptonica/default.nix b/third_party/nixpkgs/pkgs/development/libraries/leptonica/default.nix index 11f1c7fd9c..363140b5f5 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/leptonica/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/leptonica/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "leptonica"; - version = "1.80.0"; + version = "1.81.0"; src = fetchurl { url = "http://www.leptonica.org/source/${pname}-${version}.tar.gz"; - sha256 = "192bs676ind8627f0v3v8d1q7r4xwc7q0zvbdbxn1fgvmv14d77c"; + sha256 = "sha256-0ZKwVem9YLhBEQI8yYDDc5Dm1CexlKj9K9YRVDo73a0="; }; nativeBuildInputs = [ autoreconfHook pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libadwaita/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libadwaita/default.nix index f3b9cad072..d6cffcab7f 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libadwaita/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libadwaita/default.nix @@ -2,35 +2,40 @@ , stdenv , fetchFromGitLab , docbook-xsl-nons +, gi-docgen , gtk-doc +, libxml2 , meson , ninja , pkg-config , sassc , vala , gobject-introspection +, fribidi , gtk4 , xvfb-run }: stdenv.mkDerivation rec { pname = "libadwaita"; - version = "unstable-2021-05-01"; + version = "1.0.0-alpha.1"; outputs = [ "out" "dev" "devdoc" ]; - outputBin = "dev"; + outputBin = "devdoc"; # demo app src = fetchFromGitLab { domain = "gitlab.gnome.org"; owner = "GNOME"; repo = "libadwaita"; - rev = "8d66b987a19979d9d7b85dacc6bad5ce0c8743fe"; - sha256 = "0i3wav6jsyi4w4i2r1rad769m5y5s9djj4zqb7dfyh0bad24ba3q"; + rev = version; + sha256 = "1v52md62kaqykv8b6kxxbxwnbdzlda4ir7n5wh2iizadcailyw7p"; }; nativeBuildInputs = [ docbook-xsl-nons + gi-docgen gtk-doc + libxml2 # for xmllint meson ninja pkg-config @@ -43,6 +48,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ + fribidi gobject-introspection gtk4 ]; @@ -57,6 +63,10 @@ stdenv.mkDerivation rec { xvfb-run meson test ''; + postInstall = '' + mv $out/share/{doc,gtk-doc} + ''; + meta = with lib; { description = "Library to help with developing UI for mobile devices using GTK/GNOME"; homepage = "https://gitlab.gnome.org/GNOME/libadwaita"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libao/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libao/default.nix index 99d38f0cfc..4a07ba9da7 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libao/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libao/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchFromGitHub, autoreconfHook, pkg-config, libpulseaudio, alsaLib, libcap +{ stdenv, lib, fetchFromGitHub, autoreconfHook, pkg-config, libpulseaudio, alsa-lib, libcap , CoreAudio, CoreServices, AudioUnit , usePulseAudio }: @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { buildInputs = [ ] ++ lib.optional usePulseAudio libpulseaudio ++ - lib.optionals stdenv.isLinux [ alsaLib libcap ] ++ + lib.optionals stdenv.isLinux [ alsa-lib libcap ] ++ lib.optionals stdenv.isDarwin [ CoreAudio CoreServices AudioUnit ]; nativeBuildInputs = [ autoreconfHook pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libaom/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libaom/default.nix index 83f5de4d01..ef76f61efa 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libaom/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libaom/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "libaom"; - version = "3.1.0"; + version = "3.1.1"; src = fetchzip { url = "https://aomedia.googlesource.com/aom/+archive/v${version}.tar.gz"; - sha256 = "1v3i34jmbz1p3x8msj3vx46nl6jdzxbkr2lfbh06vard8adb16il"; + sha256 = "11fy2xw35ladkjcz71samhcpqlqr3y0n1n17nk90i13aydrll66f"; stripRoot = false; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libass/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libass/default.nix index 3a8c2a2655..afc9922053 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libass/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libass/default.nix @@ -1,13 +1,11 @@ { lib, stdenv, fetchurl, pkg-config, yasm , freetype, fribidi, harfbuzz -, encaSupport ? true, enca ? null # enca support , fontconfigSupport ? true, fontconfig ? null # fontconfig support , rasterizerSupport ? false # Internal rasterizer , largeTilesSupport ? false # Use larger tiles in the rasterizer , libiconv }: -assert encaSupport -> enca != null; assert fontconfigSupport -> fontconfig != null; let @@ -25,7 +23,6 @@ stdenv.mkDerivation rec { }; configureFlags = [ - (mkFlag encaSupport "enca") (mkFlag fontconfigSupport "fontconfig") (mkFlag rasterizerSupport "rasterizer") (mkFlag largeTilesSupport "large-tiles") @@ -34,7 +31,6 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config yasm ]; buildInputs = [ freetype fribidi harfbuzz ] - ++ optional encaSupport enca ++ optional fontconfigSupport fontconfig ++ optional stdenv.isDarwin libiconv; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libavif/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libavif/default.nix index 27427d5e6d..81f07703c9 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libavif/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libavif/default.nix @@ -11,13 +11,13 @@ stdenv.mkDerivation rec { pname = "libavif"; - version = "0.9.1"; + version = "0.9.2"; src = fetchFromGitHub { owner = "AOMediaCodec"; repo = pname; rev = "v${version}"; - sha256 = "sha256-XWPB5JI4V/anvtHFGY4ejeSlBbxzK6KRG8e5vBhxL8A="; + sha256 = "sha256-0/5JLynYzr7ZewBbrNoxr26UkVzpSP9RqlmH2ql8tfs="; }; # reco: encode libaom slowest but best, decode dav1d fastest diff --git a/third_party/nixpkgs/pkgs/development/libraries/libbencodetools/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libbencodetools/default.nix new file mode 100644 index 0000000000..b8150a90f6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libbencodetools/default.nix @@ -0,0 +1,30 @@ +{ stdenv, lib, fetchFromGitLab +}: + +stdenv.mkDerivation rec { + pname = "libbencodetools"; + version = "unstable-2021-04-15"; + + src = fetchFromGitLab { + owner = "heikkiorsila"; + repo = "bencodetools"; + rev = "1ab11f6509a348975e8aec829d7abbf2f8e9b7d1"; + sha256 = "1i2dgvxxwj844yn45hnfx3785ljbvbkri0nv0jx51z4i08w7cz0h"; + }; + + postPatch = '' + patchShebangs . + ''; + + configureFlags = [ + "--without-python" + ]; + + meta = with lib; { + description = "Collection of tools for manipulating bencoded data"; + homepage = "https://gitlab.com/heikkiorsila/bencodetools"; + license = licenses.bsd2; + maintainers = with maintainers; [ OPNA2608 ]; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/libcanberra/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libcanberra/default.nix index 0127c1ebe8..5d4bca0f1b 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libcanberra/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libcanberra/default.nix @@ -2,7 +2,7 @@ , gtk ? null , libpulseaudio, gst_all_1, libvorbis, libcap , CoreServices -, withAlsa ? stdenv.isLinux, alsaLib }: +, withAlsa ? stdenv.isLinux, alsa-lib }: stdenv.mkDerivation rec { name = "libcanberra-0.30"; @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { ] ++ (with gst_all_1; [ gstreamer gst-plugins-base ]) ++ lib.optional stdenv.isDarwin CoreServices ++ lib.optional stdenv.isLinux libcap - ++ lib.optional withAlsa alsaLib; + ++ lib.optional withAlsa alsa-lib; configureFlags = [ "--disable-oss" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libcef/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libcef/default.nix index ec1a5ee382..c3d6516a3d 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libcef/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libcef/default.nix @@ -1,26 +1,66 @@ -{ lib, stdenv, fetchurl, cmake, alsaLib, atk, cairo, cups, dbus, expat, fontconfig -, GConf, gdk-pixbuf, glib, gtk2, libX11, libxcb, libXcomposite, libXcursor -, libXdamage, libXext, libXfixes, libXi, libXrandr, libXrender, libXScrnSaver -, libXtst, nspr, nss, pango, libpulseaudio, systemd, at-spi2-atk, at-spi2-core +{ lib, stdenv, fetchurl, cmake +, glib +, nss +, nspr +, atk +, at-spi2-atk +, libdrm +, expat +, libxcb +, libxkbcommon +, libX11 +, libXcomposite +, libXdamage +, libXext +, libXfixes +, libXrandr +, mesa +, gtk3 +, pango +, cairo +, alsa-lib +, dbus +, at-spi2-core +, cups +, libxshmfence }: let - libPath = - lib.makeLibraryPath [ - alsaLib atk cairo cups dbus expat fontconfig GConf gdk-pixbuf glib gtk2 - libX11 libxcb libXcomposite libXcursor libXdamage libXext libXfixes libXi - libXrandr libXrender libXScrnSaver libXtst nspr nss pango libpulseaudio - systemd at-spi2-core at-spi2-atk - ]; -in -stdenv.mkDerivation rec { + rpath = lib.makeLibraryPath [ + glib + nss + nspr + atk + at-spi2-atk + libdrm + expat + libxcb + libxkbcommon + libX11 + libXcomposite + libXdamage + libXext + libXfixes + libXrandr + mesa + gtk3 + pango + cairo + alsa-lib + dbus + at-spi2-core + cups + libxshmfence + ]; +in stdenv.mkDerivation rec { pname = "cef-binary"; - version = "75.1.14-gc81164e"; + version = "90.6.7"; + gitRevision = "19ba721"; + chromiumVersion = "90.0.4430.212"; src = fetchurl { - name = "cef_binary_75.1.14+gc81164e+chromium-75.0.3770.100_linux64_minimal.tar.bz2"; - url = "http://opensource.spotify.com/cefbuilds/cef_binary_75.1.14%2Bgc81164e%2Bchromium-75.0.3770.100_linux64_minimal.tar.bz2"; - sha256 = "0985b2bx505j0q693hifjgidzb597wqf5idql5aqxs8lfxhc2pgg"; + url = "https://cef-builds.spotifycdn.com/cef_binary_${version}+g${gitRevision}+chromium-${chromiumVersion}_linux64_minimal.tar.bz2"; + sha256 = "1ja711x9fdlf21qw1k9xn3lvjc5zsfgnjga1w1r8sysam73jk7xj"; }; nativeBuildInputs = [ cmake ]; @@ -32,7 +72,7 @@ stdenv.mkDerivation rec { mkdir -p $out/lib/ $out/share/cef/ cp libcef_dll_wrapper/libcef_dll_wrapper.a $out/lib/ cp ../Release/libcef.so $out/lib/ - patchelf --set-rpath "${libPath}" $out/lib/libcef.so + patchelf --set-rpath "${rpath}" $out/lib/libcef.so cp ../Release/*.bin $out/share/cef/ cp -r ../Resources/* $out/share/cef/ cp -r ../include $out/ @@ -40,7 +80,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "Simple framework for embedding Chromium-based browsers in other applications"; - homepage = "http://opensource.spotify.com/cefbuilds/index.html"; + homepage = "https://cef-builds.spotifycdn.com/index.html"; maintainers = with maintainers; [ puffnfresh ]; license = licenses.bsd3; platforms = with platforms; linux; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libcouchbase/0001-Fix-timeouts-in-libcouchbase-testsuite.patch b/third_party/nixpkgs/pkgs/development/libraries/libcouchbase/0001-Fix-timeouts-in-libcouchbase-testsuite.patch deleted file mode 100644 index 1c57757f85..0000000000 --- a/third_party/nixpkgs/pkgs/development/libraries/libcouchbase/0001-Fix-timeouts-in-libcouchbase-testsuite.patch +++ /dev/null @@ -1,36 +0,0 @@ -From 58237e64fa77ec5cdec658b3295f71ec899175fa Mon Sep 17 00:00:00 2001 -From: Maximilian Bosch -Date: Sat, 5 Oct 2019 13:47:59 +0200 -Subject: [PATCH] Fix timeouts in libcouchbase testsuite - -Nix-specific patch. Basically -https://github.com/couchbase/libcouchbase/commit/b272f6ab88be523bbcf9d5c4252d07fccb023fe5, but -rebased onto 2.10.4. ---- - src/ssl/ssl_e.c | 6 ++++++ - 1 file changed, 6 insertions(+) - -diff --git a/src/ssl/ssl_e.c b/src/ssl/ssl_e.c -index f4506cf..734a3e6 100644 ---- a/src/ssl/ssl_e.c -+++ b/src/ssl/ssl_e.c -@@ -210,10 +210,16 @@ flush_ssl_data(lcbio_ESSL *es) - * calls. While we could have done this inline with the send() call this - * would make future optimization more difficult. */ - GT_WRITE_DONE: -+#if !LCB_CAN_OPTIMIZE_SSL_BIO -+ BIO_get_mem_ptr(es->wbio, &wmb); -+#endif - while (wmb->length > (size_t)tmp_len) { - char dummy[4096]; - unsigned to_read = MINIMUM(wmb->length-tmp_len, sizeof dummy); - BIO_read(es->wbio, dummy, to_read); -+#if !LCB_CAN_OPTIMIZE_SSL_BIO -+ BIO_get_mem_ptr(es->wbio, &wmb); -+#endif - } - BIO_clear_retry_flags(es->wbio); - return 0; --- -2.23.0 - diff --git a/third_party/nixpkgs/pkgs/development/libraries/libcouchbase/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libcouchbase/default.nix index 9f75eafdf2..9cb83c5bf6 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libcouchbase/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libcouchbase/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "libcouchbase"; - version = "2.10.4"; + version = "3.1.3"; src = fetchFromGitHub { owner = "couchbase"; repo = "libcouchbase"; rev = version; - sha256 = "1yfmcx65aqd5l87scha6kmm2s38n85ci3gg0h6qfs16s3jfi6bw7"; + sha256 = "16mafxkdbns33yjyc2p3j2iajjpyq0zp66wpjir2qj1w3kgggcw8"; }; cmakeFlags = [ "-DLCB_NO_MOCK=ON" ]; @@ -19,8 +19,6 @@ stdenv.mkDerivation rec { # Running tests in parallel does not work enableParallelChecking = false; - patches = [ ./0001-Fix-timeouts-in-libcouchbase-testsuite.patch ]; - doCheck = !stdenv.isDarwin; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/libraries/libdeltachat/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libdeltachat/default.nix index a5c0752b9a..77315776ac 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libdeltachat/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libdeltachat/default.nix @@ -11,19 +11,19 @@ stdenv.mkDerivation rec { pname = "libdeltachat"; - version = "1.55.0"; + version = "1.56.0"; src = fetchFromGitHub { owner = "deltachat"; repo = "deltachat-core-rust"; rev = version; - sha256 = "sha256-D30usAVpyiqXQMrTvmdaGFig7jhyb3rMTBQL/E2UL50="; + sha256 = "sha256-ZyVEI6q+GzHLEFH01TxS7NqwT7zqVgg0vduyf/fibB8="; }; cargoDeps = rustPlatform.fetchCargoTarball { inherit src; name = "${pname}-${version}"; - sha256 = "1hf7lrqbv0ba9c0kmnjn5x1fispyyjip1gmllq77z6nsjpn0f9w8"; + sha256 = "0pb1rcv45xa95ziqap94yy52fy02vh401iqsgi18nm1j6iyyngc8"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/libdrm/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libdrm/default.nix index b7fd94f9f1..ca90750b8c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libdrm/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libdrm/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { pname = "libdrm"; - version = "2.4.105"; + version = "2.4.106"; src = fetchurl { url = "https://dri.freedesktop.org/${pname}/${pname}-${version}.tar.xz"; - sha256 = "0iiamypwdfiz250ki120nh598r48yyacmnndb4mkximdgi5h478x"; + sha256 = "1m3vwpabjg3az84vmyxi96jyd7rrqm6qkhk1gq41w5wv89aarn4j"; }; outputs = [ "out" "dev" "bin" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libedit/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libedit/default.nix index dc5a384569..daf0f29284 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libedit/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libedit/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "libedit"; - version = "20210216-3.1"; + version = "20210522-3.1"; src = fetchurl { url = "https://thrysoee.dk/editline/${pname}-${version}.tar.gz"; - sha256 = "sha256-IoP3QdKquTXIxSwEtXv5UtAsLALmURcvisgR93sfx3o="; + sha256 = "sha256-AiC8IEfpJ8DBmE7197TrKpRppbe/ErpXPKOyPKAru28="; }; outputs = [ "out" "dev" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libfprint-2-tod1-vfs0090/0001-vfs0090-add-missing-explicit-dependencies-in-meson.b.patch b/third_party/nixpkgs/pkgs/development/libraries/libfprint-2-tod1-vfs0090/0001-vfs0090-add-missing-explicit-dependencies-in-meson.b.patch new file mode 100644 index 0000000000..ac06e83ab9 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libfprint-2-tod1-vfs0090/0001-vfs0090-add-missing-explicit-dependencies-in-meson.b.patch @@ -0,0 +1,28 @@ +From c02f2e040dd1e7664777c5a705272e4eb7bfb569 Mon Sep 17 00:00:00 2001 +From: Vincent Breitmoser +Date: Thu, 10 Jun 2021 14:09:19 +0200 +Subject: [PATCH] vfs0090: add missing explicit dependencies in meson.build + +Make all dependencies explicit, so they can be found when building with Nix. + +--- + meson.build | 3 +++ + 1 file changed, 3 insertions(+) + +diff --git a/meson.build b/meson.build +index 54a7ca4..88f8793 100644 +--- a/meson.build ++++ b/meson.build +@@ -17,6 +17,9 @@ udev_dep = dependency('udev') + vfs009x_deps += libfprint_tod_dep + vfs009x_deps += dependency('nss') + vfs009x_deps += dependency('openssl') ++vfs009x_deps += dependency('gusb') ++vfs009x_deps += dependency('libfprint-2') ++vfs009x_deps += dependency('glib-2.0') + + vfs0090_deps += dependency('pixman-1') + +-- +2.31.1 + diff --git a/third_party/nixpkgs/pkgs/development/libraries/libfprint-2-tod1-vfs0090/0002-vfs0090-add-missing-linux-limits.h-include.patch b/third_party/nixpkgs/pkgs/development/libraries/libfprint-2-tod1-vfs0090/0002-vfs0090-add-missing-linux-limits.h-include.patch new file mode 100644 index 0000000000..6111cf0ad2 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libfprint-2-tod1-vfs0090/0002-vfs0090-add-missing-linux-limits.h-include.patch @@ -0,0 +1,26 @@ +From 5405e02c629e689449e852424aed8cca217ed309 Mon Sep 17 00:00:00 2001 +From: Vincent Breitmoser +Date: Thu, 10 Jun 2021 14:10:52 +0200 +Subject: [PATCH] vfs0090: add missing include + +This header is needed for the NAME_MAX constant used in this file. + +--- + vfs0090.c | 1 + + 1 file changed, 1 insertion(+) + +diff --git a/vfs0090.c b/vfs0090.c +index 8034faf..6070df7 100644 +--- a/vfs0090.c ++++ b/vfs0090.c +@@ -24,6 +24,7 @@ + + #include + #include ++#include + #include + #include + #include +-- +2.31.1 + diff --git a/third_party/nixpkgs/pkgs/development/libraries/libfprint-2-tod1-vfs0090/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libfprint-2-tod1-vfs0090/default.nix new file mode 100644 index 0000000000..840f8e2271 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libfprint-2-tod1-vfs0090/default.nix @@ -0,0 +1,42 @@ +{ stdenv, lib, fetchFromGitLab, pkg-config, libfprint, libfprint-tod, gusb, udev, nss, openssl, meson, pixman, ninja, glib }: +stdenv.mkDerivation { + pname = "libfprint-2-tod1-vfs0090"; + version = "0.8.5"; + + src = fetchFromGitLab { + domain = "gitlab.freedesktop.org"; + owner = "3v1n0"; + repo = "libfprint-tod-vfs0090"; + rev = "6084a1545589beec0c741200b18b0902cca225ba"; + sha256 = "sha256-tSML/8USd/LuHF/YGLvNgykixF6VYtfE4SXzeV47840="; + }; + + patches = [ + # TODO remove once https://gitlab.freedesktop.org/3v1n0/libfprint-tod-vfs0090/-/merge_requests/1 is merged + ./0001-vfs0090-add-missing-explicit-dependencies-in-meson.b.patch + # TODO remove once https://gitlab.freedesktop.org/3v1n0/libfprint-tod-vfs0090/-/merge_requests/2 is merged + ./0002-vfs0090-add-missing-linux-limits.h-include.patch + ]; + + nativeBuildInputs = [ pkg-config meson ninja ]; + buildInputs = [ libfprint libfprint-tod glib gusb udev nss openssl pixman ]; + + installPhase = '' + runHook preInstall + + install -D -t "$out/lib/libfprint-2/tod-1/" libfprint-tod-vfs009x.so + install -D -t "$out/lib/udev/rules.d/" $src/60-libfprint-2-tod-vfs0090.rules + + runHook postInstall + ''; + + passthru.driverPath = "/lib/libfprint-2/tod-1"; + + meta = with lib; { + description = "A libfprint-2-tod Touch OEM Driver for 2016 ThinkPad's fingerprint readers"; + homepage = "https://gitlab.freedesktop.org/3v1n0/libfprint-tod-vfs0090"; + license = licenses.lgpl21Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ valodim ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/libgcrypt/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libgcrypt/default.nix index 6b761d2170..506b1a5b25 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libgcrypt/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libgcrypt/default.nix @@ -4,11 +4,11 @@ assert enableCapabilities -> stdenv.isLinux; stdenv.mkDerivation rec { pname = "libgcrypt"; - version = "1.9.2"; + version = "1.9.3"; src = fetchurl { url = "mirror://gnupg/libgcrypt/${pname}-${version}.tar.bz2"; - sha256 = "sha256-ssENCRUTsnHkcXcnRgex/7o9lbGIu/qHl/lIrskFPFo="; + sha256 = "sha256-l+vk+U4vfjW3UhlM4VoPPGYyTg/2ryZlm7+1/y7DKP0="; }; outputs = [ "out" "dev" "info" ]; @@ -58,6 +58,7 @@ stdenv.mkDerivation rec { meta = with lib; { homepage = "https://www.gnu.org/software/libgcrypt/"; + changelog = "https://git.gnupg.org/cgi-bin/gitweb.cgi?p=libgcrypt.git;a=blob;f=NEWS;hb=refs/tags/${pname}-${version}"; description = "General-purpose cryptographic library"; license = licenses.lgpl2Plus; platforms = platforms.all; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libgmpris/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libgmpris/default.nix new file mode 100644 index 0000000000..a7826fabd1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libgmpris/default.nix @@ -0,0 +1,34 @@ +{ stdenv +, lib +, fetchurl +, pkg-config +, glib +, gobject-introspection +}: + +stdenv.mkDerivation rec { + pname = "libgmpris"; + version = "2.2.1-8"; + + src = fetchurl { + url = "https://www.sonarnerd.net/src/focal/src/${pname}_${version}.tar.gz"; + sha256 = "sha256-iyKNmg6sf+mxlY/4vt5lKdrKfJzkoCYU2j1O8uwk8K4="; + }; + + nativeBuildInputs = [ pkg-config gobject-introspection ]; + + buildInputs = [ glib ]; + + postInstall = '' + mkdir -p $out/share/doc/${pname} + cp ./AUTHORS $out/share/doc/${pname} + cp ./README $out/share/doc/${pname} + ''; + + meta = with lib; { + homepage = "https://www.sonarnerd.net/src/"; + description = "GMPRIS GDBus bindings GDBus bindings generated from the GMPRIS XML spec files"; + license = licenses.lgpl21; + maintainers = with maintainers; [ lovesegfault ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/libgpg-error/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libgpg-error/default.nix index da53a9916d..1f6fd4835a 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libgpg-error/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libgpg-error/default.nix @@ -34,16 +34,6 @@ in stdenv.mkDerivation (rec { '' + lib.optionalString (stdenv.hostPlatform.isAarch32 && stdenv.hostPlatform.isMusl) '' ln -s src/syscfg/lock-obj-pub.arm-unknown-linux-gnueabi.h src/syscfg/lock-obj-pub.arm-unknown-linux-musleabihf.h ln -s src/syscfg/lock-obj-pub.arm-unknown-linux-gnueabi.h src/syscfg/lock-obj-pub.linux-musleabihf.h - '' - # This file was accidentally excluded from the sdist until - # 013720333c6ec1d38791689bc49ba039d98e16b3, post release. - # TODO make unconditional next mass rebuild - + lib.optionalString (stdenv.buildPlatform != stdenv.hostPlatform) '' - cp ${fetchurl { - url = "https://raw.githubusercontent.com/gpg/libgpg-error/50e62b36ea01ed25d12c443088b85d4f41a2b3e1/src/gen-lock-obj.sh"; - sha256 = "10cslipa6npalj869asaamj0w941dhmx0yjafpyyh69ypsg2m2c3"; - }} ./src/gen-lock-obj.sh - chmod +x ./src/gen-lock-obj.sh ''; outputs = [ "out" "dev" "info" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libhandy/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libhandy/default.nix index 891bd04ea5..0d69a5b93e 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libhandy/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libhandy/default.nix @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { pname = "libhandy"; - version = "1.2.2"; + version = "1.2.3"; outputs = [ "out" @@ -40,7 +40,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "sha256-R//Shl0CvRyleVIt6t1+L5U2Lx8gJGL9XuriuBZosEg="; + sha256 = "sha256-kuxKWB7BtB3Qek6PqvXVKuN8q7fh+n+UTWyvvllrbWE="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/libharu/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libharu/default.nix index 53c14027ff..7b8a5ac02c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libharu/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libharu/default.nix @@ -1,10 +1,13 @@ -{ lib, stdenv, fetchzip, cmake, zlib, libpng }: +{ lib, stdenv, fetchFromGitHub, cmake, zlib, libpng }: -stdenv.mkDerivation { - name = "libharu-2.3.0"; +stdenv.mkDerivation rec { + pname = "libharu"; + version = "2.3.0"; - src = fetchzip { - url = "https://github.com/libharu/libharu/archive/RELEASE_2_3_0.tar.gz"; + src = fetchFromGitHub { + owner = "libharu"; + repo = pname; + rev = "RELEASE_${lib.replaceStrings ["."] ["_"] version}"; sha256 = "15s9hswnl3qqi7yh29jyrg0hma2n99haxznvcywmsp8kjqlyg75q"; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libidn/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libidn/default.nix index afe5e550b3..15d7ca3302 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libidn/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libidn/default.nix @@ -1,24 +1,20 @@ { fetchurl, lib, stdenv, libiconv }: stdenv.mkDerivation rec { - name = "libidn-1.36"; + pname = "libidn"; + version = "1.37"; src = fetchurl { - url = "mirror://gnu/libidn/${name}.tar.gz"; - sha256 = "0f20n634whpmdwr81c2r0vxxjwchgkvhsr1i8s2bm0ad6h473dhl"; + url = "mirror://gnu/libidn/${pname}-${version}.tar.gz"; + sha256 = "1hljls9rkilh04dwiwg388wk8djkac8idijrdysqq2nqbh6rg3iw"; }; outputs = [ "bin" "dev" "out" "info" "devdoc" ]; - # broken with gcc-7 - #doCheck = !stdenv.isDarwin && !stdenv.hostPlatform.isMusl; - hardeningDisable = [ "format" ]; buildInputs = lib.optional stdenv.isDarwin libiconv; - doCheck = false; # fails - meta = { homepage = "https://www.gnu.org/software/libidn/"; description = "Library for internationalized domain names"; @@ -42,6 +38,6 @@ stdenv.mkDerivation rec { repositories.git = "git://git.savannah.gnu.org/libidn.git"; license = lib.licenses.lgpl2Plus; platforms = lib.platforms.all; - maintainers = [ ]; + maintainers = with lib.maintainers; [ lsix ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/libimagequant/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libimagequant/default.nix index ad1df00c25..8a57514114 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libimagequant/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libimagequant/default.nix @@ -2,20 +2,20 @@ stdenv.mkDerivation rec { pname = "libimagequant"; - version = "2.14.1"; + version = "2.15.1"; src = fetchFromGitHub { owner = "ImageOptim"; repo = pname; rev = version; - sha256 = "sha256-yWtwBTAs6dlrZz3Bd/4DUb488IJsahPKwjluukTlv/o="; + sha256 = "sha256-ElMwLeUdrJeJJ9YoieCF/CUNcNMwj5WcjXmMW/nMyAw="; }; preConfigure = '' patchShebangs ./configure ''; - configureFlags = lib.optionals stdenv.isAarch64 [ "--disable-sse" ]; + configureFlags = lib.optionals (!stdenv.isi686 && !stdenv.isx86_64) [ "--disable-sse" ]; meta = with lib; { homepage = "https://pngquant.org/lib/"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libime/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libime/default.nix index f9fcdedf18..4f0caa7cc3 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libime/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libime/default.nix @@ -18,21 +18,21 @@ let url = "https://download.fcitx-im.org/data/lm_sc.3gm.arpa-${arpaVer}.tar.bz2"; sha256 = "0bqy3l7mif0yygjrcm65qallszgn17mvgyxhvz7a54zaamyan6vm"; }; - dictVer = "20200715"; + dictVer = "20210402"; dict = fetchurl { url = "https://download.fcitx-im.org/data/dict.utf8-${dictVer}.tar.xz"; - sha256 = "1ln7r64j8mc7wz4j0q4v8wd68wy7qqz4bz1dpxk7zqbdvza6rhr3"; + sha256 = "sha256-gYz7tama5bQMJwe2FYc09KEBlkRIU0AMvWsUUFWS2A0="; }; in stdenv.mkDerivation rec { pname = "libime"; - version = "1.0.3"; + version = "1.0.7"; src = fetchFromGitHub { owner = "fcitx"; repo = "libime"; rev = version; - sha256 = "sha256-Ykj4/3yKUqK0BRqW1E2zFYNgeUOXQ1DsotmKU6c8vEg="; + sha256 = "sha256-q/SXS6pT4vBkCkCTarPVHrZPXijYnc2t51YGRvzQ0FY="; fetchSubmodules = true; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libint/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libint/default.nix new file mode 100644 index 0000000000..6df3d5a7eb --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libint/default.nix @@ -0,0 +1,76 @@ +{ lib, stdenv, fetchFromGitHub, autoconf, automake, libtool +, python3, perl, gmpxx, mpfr, boost, eigen, gfortran +, enableFMA ? false +}: + +stdenv.mkDerivation rec { + pname = "libint2"; + version = "2.6.0"; + + src = fetchFromGitHub { + owner = "evaleev"; + repo = "libint"; + rev = "v${version}"; + sha256 = "0pbc2j928jyffhdp4x5bkw68mqmx610qqhnb223vdzr0n2yj5y19"; + }; + + patches = [ + ./fix-paths.patch + ]; + + nativeBuildInputs = [ + autoconf + automake + libtool + gfortran + mpfr + python3 + perl + gmpxx + ]; + + buildInputs = [ boost ]; + + enableParallelBuilding = true; + + doCheck = true; + + configureFlags = [ + "--enable-eri=2" + "--enable-eri3=2" + "--enable-eri2=2" + "--with-eri-max-am=7,5,4" + "--with-eri-opt-am=3" + "--with-eri3-max-am=7" + "--with-eri2-max-am=7" + "--with-g12-max-am=5" + "--with-g12-opt-am=3" + "--with-g12dkh-max-am=5" + "--with-g12dkh-opt-am=3" + "--enable-contracted-ints" + "--enable-shared" + ] ++ lib.optional enableFMA "--enable-fma"; + + preConfigure = '' + ./autogen.sh + ''; + + postBuild = '' + # build the fortran interface file + cd export/fortran + make libint_f.o ENABLE_FORTRAN=yes + cd ../.. + ''; + + postInstall = '' + cp export/fortran/libint_f.mod $out/include/ + ''; + + meta = with lib; { + description = "Library for the evaluation of molecular integrals of many-body operators over Gaussian functions"; + homepage = "https://github.com/evaleev/libint"; + license = with licenses; [ lgpl3Only gpl3Only ]; + maintainers = [ maintainers.markuskowa ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/libint/fix-paths.patch b/third_party/nixpkgs/pkgs/development/libraries/libint/fix-paths.patch new file mode 100644 index 0000000000..2cf178e81f --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libint/fix-paths.patch @@ -0,0 +1,96 @@ +diff --git a/export/fortran/Makefile b/export/fortran/Makefile +index 62d8711..a83edc7 100644 +--- a/export/fortran/Makefile ++++ b/export/fortran/Makefile +@@ -1,12 +1,14 @@ +-TOPDIR = .. +-SRCDIR = .. ++TOPDIR = ../.. ++SRCDIR = ../.. + +--include ../MakeSuffixRules +--include ../MakeVars +--include ../MakeVars.features ++-include ../../lib/MakeSuffixRules ++-include ../../src/bin/MakeVars ++-include ../../src/lib/libint/MakeVars.features + +-FCFLAGS := -I../include -I../include/libint2 -D__COMPILING_LIBINT2=1 $(FCFLAGS) +-COMPUTE_LIB = -L../lib -lint2 ++FCFLAGS := -I../../include -I../../include/libint2 -D__COMPILING_LIBINT2=1 $(FCFLAGS) ++COMPUTE_LIB = -L../../lib -lint2 ++ ++CXXCPP = cc -E -I../../include/libint2 + + .PHONY: clean distclean default make_test check_test + +@@ -28,7 +30,7 @@ libint2_types_f.h: $(TOPDIR)/include/libint2.h.i + + fortran_example.o: libint_f.o + +-fortran_incldefs.h: $(TOPDIR)/include/libint2_types.h ++fortran_incldefs.h: $(TOPDIR)/include/libint2/libint2_types.h + grep '^#' $< | grep -v '#include' > $@ + + fortran_example: fortran_example.o libint_f.o +diff --git a/src/bin/libint/Makefile b/src/bin/libint/Makefile +index 406306c..bd8a695 100644 +--- a/src/bin/libint/Makefile ++++ b/src/bin/libint/Makefile +@@ -59,7 +59,7 @@ test: $(TESTCXXOBJ) $(LIBTARGET) + $(CXX) -o $@ $(CXXFLAGS) $(LDFLAGS) $^ $(SYSLIBS) + + $(LIBTARGET): $(LIBOBJ) +- /bin/rm -f $@ ++ rm -f $@ + $(AR) $(ARFLAGS) $@ $(LIBOBJ) + $(RANLIB) $@ + +@@ -102,7 +102,7 @@ ifneq ($(CXXDEPENDSUF),none) + %.d: %.cc + $(CXXDEPEND) $(CXXDEPENDFLAGS) -c $(CPPFLAGS) $(CXXFLAGS) $< > /dev/null + sed 's/^$*.o/$*.$(OBJSUF) $*.d/g' < $(*F).$(CXXDEPENDSUF) > $(@F) +- /bin/rm -f $(*F).$(CXXDEPENDSUF) ++ rm -f $(*F).$(CXXDEPENDSUF) + else + %.d: %.cc + $(CXXDEPEND) $(CXXDEPENDFLAGS) -c $(CPPFLAGS) $(CXXFLAGS) $< | sed 's/^$*.o/$*.$(OBJSUF) $*.d/g' > $(@F) +diff --git a/tests/eri/Makefile b/tests/eri/Makefile +index 6223e4f..05909dc 100644 +--- a/tests/eri/Makefile ++++ b/tests/eri/Makefile +@@ -62,7 +62,7 @@ ifneq ($(CXXDEPENDSUF),none) + %.d: %.cc + $(CXXDEPEND) $(CXXDEPENDFLAGS) -c $(CPPFLAGS) $(CXXFLAGS) $< > /dev/null + sed 's/^$*.o/$*.$(OBJSUF) $*.d/g' < $(*F).$(CXXDEPENDSUF) > $(@F) +- /bin/rm -f $(*F).$(CXXDEPENDSUF) ++ rm -f $(*F).$(CXXDEPENDSUF) + else + %.d: %.cc + $(CXXDEPEND) $(CXXDEPENDFLAGS) -c $(CPPFLAGS) $(CXXFLAGS) $< | sed 's/^$*.o/$*.$(OBJSUF) $*.d/g' > $(@F) +diff --git a/tests/hartree-fock/Makefile b/tests/hartree-fock/Makefile +index aaebadc..4971472 100644 +--- a/tests/hartree-fock/Makefile ++++ b/tests/hartree-fock/Makefile +@@ -95,7 +95,7 @@ ifneq ($(CXXDEPENDSUF),none) + %.d:: %.cc + $(CXXDEPEND) $(CXXDEPENDFLAGS) -c $(CPPFLAGS) $(CXXFLAGS) $< > /dev/null + sed 's/^$*.o/$*.$(OBJSUF) $*.d/g' < $(*F).$(CXXDEPENDSUF) > $(@F) +- /bin/rm -f $(*F).$(CXXDEPENDSUF) ++ rm -f $(*F).$(CXXDEPENDSUF) + else + %.d:: %.cc + $(CXXDEPEND) $(CXXDEPENDFLAGS) -c $(CPPFLAGS) $(CXXFLAGS) $< | sed 's/^$*.o/$*.$(OBJSUF) $*.d/g' > $(@F) +diff --git a/tests/unit/Makefile b/tests/unit/Makefile +index f2d9400..da9d82b 100644 +--- a/tests/unit/Makefile ++++ b/tests/unit/Makefile +@@ -93,7 +93,7 @@ ifneq ($(CXXDEPENDSUF),none) + %.d:: %.cc + $(CXXDEPEND) $(CXXDEPENDFLAGS) -c $(CPPFLAGS) $(CXXGENFLAGS) $< > /dev/null + sed 's/^$*.o/$*.$(OBJSUF) $*.d/g' < $(*F).$(CXXDEPENDSUF) > $(@F) +- /bin/rm -f $(*F).$(CXXDEPENDSUF) ++ rm -f $(*F).$(CXXDEPENDSUF) + else + %.d:: %.cc + $(CXXDEPEND) $(CXXDEPENDFLAGS) -c $(CPPFLAGS) $(CXXGENFLAGS) $< | sed 's/^$*.o/$*.$(OBJSUF) $*.d/g' > $(@F) diff --git a/third_party/nixpkgs/pkgs/development/libraries/libjpeg-turbo/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libjpeg-turbo/default.nix index 1ac842e559..3d7df2bba9 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libjpeg-turbo/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libjpeg-turbo/default.nix @@ -1,26 +1,34 @@ -{ lib, stdenv, fetchFromGitHub, cmake, nasm +{ lib +, stdenv +, fetchFromGitHub +, cmake +, nasm , openjdk , enableJava ? false # whether to build the java wrapper +, enableJpeg7 ? false # whether to build libjpeg with v7 compatibility +, enableJpeg8 ? false # whether to build libjpeg with v8 compatibility , enableStatic ? stdenv.hostPlatform.isStatic , enableShared ? !stdenv.hostPlatform.isStatic }: +assert !(enableJpeg7 && enableJpeg8); # pick only one or none, not both + stdenv.mkDerivation rec { pname = "libjpeg-turbo"; - version = "2.0.6"; + version = "2.1.0"; src = fetchFromGitHub { owner = "libjpeg-turbo"; repo = "libjpeg-turbo"; rev = version; - sha256 = "0njdxfmyk8smj8bbd6fs3lxjaq3lybivwgg16gpnbiyl984dpi9b"; + sha256 = "sha256-Ma3Q/zMJPjsQmoaYJtVbHJOx65AfGLWJYi2iRFm3l5s="; }; # This is needed by freeimage patches = [ ./0001-Compile-transupp.c-as-part-of-the-library.patch ] ++ lib.optional (stdenv.hostPlatform.libc or null == "msvcrt") - ./mingw-boolean.patch; + ./mingw-boolean.patch; outputs = [ "bin" "dev" "dev_private" "out" "man" "doc" ]; @@ -40,6 +48,10 @@ stdenv.mkDerivation rec { "-DENABLE_SHARED=${if enableShared then "1" else "0"}" ] ++ lib.optionals enableJava [ "-DWITH_JAVA=1" + ] ++ lib.optionals enableJpeg7 [ + "-DWITH_JPEG7=1" + ] ++ lib.optionals enableJpeg8 [ + "-DWITH_JPEG8=1" ] ++ lib.optionals stdenv.hostPlatform.isRiscV [ # https://github.com/libjpeg-turbo/libjpeg-turbo/issues/428 # https://github.com/libjpeg-turbo/libjpeg-turbo/commit/88bf1d16786c74f76f2e4f6ec2873d092f577c75 @@ -53,7 +65,7 @@ stdenv.mkDerivation rec { homepage = "https://libjpeg-turbo.org/"; description = "A faster (using SIMD) libjpeg implementation"; license = licenses.ijg; # and some parts under other BSD-style licenses - maintainers = with maintainers; [ vcunat colemickens ]; + maintainers = with maintainers; [ vcunat colemickens kamadorueda ]; platforms = platforms.all; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/libjxl/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libjxl/default.nix new file mode 100644 index 0000000000..d33b2bc3bb --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libjxl/default.nix @@ -0,0 +1,106 @@ +{ stdenv, lib, fetchFromGitHub +, asciidoc +, brotli +, cmake +, graphviz +, doxygen +, giflib +, gperftools +, gtest +, libjpeg +, libpng +, libwebp +, openexr +, pkg-config +, python3 +, zlib +}: + +stdenv.mkDerivation rec { + pname = "libjxl"; + version = "unstable-2021-06-22"; + + src = fetchFromGitHub { + owner = "libjxl"; + repo = "libjxl"; + rev = "409efe027d6a4a4446b84abe8d7b2fa40409257d"; + sha256 = "1akb6yyp2h4h6mfcqd4bgr3ybcik5v5kdc1rxaqnyjs7fp2f6nvv"; + # There are various submodules in `third_party/`. + fetchSubmodules = true; + }; + + nativeBuildInputs = [ + asciidoc # for docs + cmake + graphviz # for docs via doxygen component `dot` + doxygen # for docs + gtest + pkg-config + python3 # for docs + ]; + + # Functionality not currently provided by this package + # that the cmake build can apparently use: + # OpenGL/GLUT (for Examples -> comparison with sjpeg) + # viewer (see `cmakeFlags`) + # plugins like for GDK and GIMP (see `cmakeFlags`) + + # Vendored libraries: + # `libjxl` currently vendors many libraries as git submodules that they + # might patch often (e.g. test/gmock, see + # https://github.com/NixOS/nixpkgs/pull/103160#discussion_r519487734). + # When it has stabilised in the future, we may want to tell the build + # to use use nixpkgs system libraries. + + # As of writing, libjxl does not point out all its dependencies + # conclusively in its README or otherwise; they can best be determined + # by checking the CMake output for "Could NOT find". + buildInputs = [ + brotli + giflib + gperftools # provides `libtcmalloc` + libjpeg + libpng + libwebp + openexr + zlib + ]; + + cmakeFlags = [ + # For C dependencies like brotli, which are dynamically linked, + # we want to use the system libraries, so that we don't have to care about + # installing their .so files generated by this build. + # The other C++ dependencies are statically linked in, so there + # using the vendorered ones is easier. + "-DJPEGXL_FORCE_SYSTEM_BROTLI=ON" + + # TODO: Update this package to enable this (overridably via an option): + # Viewer tools for evaluation. + # "-DJPEGXL_ENABLE_VIEWERS=ON" + + # TODO: Update this package to enable this (overridably via an option): + # Enable plugins, such as: + # * the `gdk-pixbuf` one, which allows applications like `eog` to load jpeg-xl files + # * the `gimp` one, which allows GIMP to load jpeg-xl files + # "-DJPEGXL_ENABLE_PLUGINS=ON" + ]; + + doCheck = true; + + # The test driver runs a test `LibraryCLinkageTest` which without + # LD_LIBRARY_PATH setting errors with: + # /build/source/build/tools/tests/libjxl_test: error while loading shared libraries: libjxl.so.0 + # The required file is in the build directory (`$PWD`). + preCheck = '' + export LD_LIBRARY_PATH=$LD_LIBRARY_PATH''${LD_LIBRARY_PATH:+:}$PWD + ''; + + meta = with lib; { + homepage = "https://github.com/libjxl/libjxl"; + description = "JPEG XL image format reference implementation."; + license = licenses.bsd3; + maintainers = with maintainers; [ nh2 ]; + platforms = platforms.all; + broken = stdenv.hostPlatform.isAarch64; # `internal compiler error`, see https://github.com/NixOS/nixpkgs/pull/103160#issuecomment-866388610 + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/libksba/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libksba/default.nix index e623aa0d11..c8998446c7 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libksba/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libksba/default.nix @@ -1,11 +1,11 @@ { buildPackages, lib, stdenv, fetchurl, gettext, libgpgerror }: stdenv.mkDerivation rec { - name = "libksba-1.5.0"; + name = "libksba-1.5.1"; src = fetchurl { url = "mirror://gnupg/libksba/${name}.tar.bz2"; - sha256 = "1fm0mf3wq9fmyi1rmc1vk2fafn6liiw2mgxml3g7ybbb44lz2jmf"; + sha256 = "sha256-sPTGXk5EfZojSfa4wOd6KL6VMeRUi6AsVF0fRtx7+SE="; }; outputs = [ "out" "dev" "info" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/liblangtag/default.nix b/third_party/nixpkgs/pkgs/development/libraries/liblangtag/default.nix index 5c31197ebf..5ba2ecc5d6 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/liblangtag/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/liblangtag/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, fetchFromBitbucket, autoreconfHook, gtk-doc, gettext +{ lib, stdenv, fetchurl, autoreconfHook, gtk-doc, gettext , pkg-config, glib, libxml2, gobject-introspection, gnome-common, unzip }: @@ -6,11 +6,10 @@ stdenv.mkDerivation rec { pname = "liblangtag"; version = "0.6.3"; - src = fetchFromBitbucket { - owner = "tagoh"; - repo = pname; - rev = version; - sha256 = "10rycs8xrxzf9frzalv3qx8cs1jcildhrr4imzxdmr9f4l585z96"; + # Artifact tarball contains lt-localealias.h needed for darwin + src = fetchurl { + url = "https://bitbucket.org/tagoh/liblangtag/downloads/${pname}-${version}.tar.bz2"; + sha256 = "sha256-HxKiCgLsOo0i5U3tuLaDpDycFgvaG6M3vxBgYHrnM70="; }; core_zip = fetchurl { @@ -31,19 +30,19 @@ stdenv.mkDerivation rec { cp "${language_subtag_registry}" data/language-subtag-registry ''; - configureFlags = [ - "--with-locale-alias=${stdenv.cc.libc}/share/locale/locale.alias" - ]; + configureFlags = + lib.optional + (stdenv.hostPlatform.libc == "glibc") + "--with-locale-alias=${stdenv.cc.libc}/share/locale/locale.alias"; buildInputs = [ gettext glib libxml2 gobject-introspection gnome-common ]; nativeBuildInputs = [ autoreconfHook gtk-doc gettext pkg-config unzip ]; - meta = { - inherit version; + meta = with lib; { description = "An interface library to access tags for identifying languages"; - license = lib.licenses.mpl20; - maintainers = [lib.maintainers.raskin]; - platforms = lib.platforms.linux; + license = licenses.mpl20; + maintainers = [ maintainers.raskin ]; + platforms = platforms.unix; # There are links to a homepage that are broken by a BitBucket change homepage = "https://bitbucket.org/tagoh/liblangtag/overview"; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libmbim/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libmbim/default.nix index 9695b221cb..ef13fdc9de 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libmbim/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libmbim/default.nix @@ -1,11 +1,12 @@ { lib, stdenv , fetchurl , pkg-config -, gobject-introspection , glib , python3 , systemd , libgudev +, withIntrospection ? stdenv.hostPlatform == stdenv.buildPlatform +, gobject-introspection }: stdenv.mkDerivation rec { @@ -21,7 +22,7 @@ stdenv.mkDerivation rec { configureFlags = [ "--with-udev-base-dir=${placeholder "out"}/lib/udev" - "--enable-introspection" + (lib.enableFeature withIntrospection "introspection") ]; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/libmikmod/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libmikmod/default.nix index a734a4b800..02ccf0c66f 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libmikmod/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libmikmod/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, texinfo, alsaLib, libpulseaudio, CoreAudio }: +{ lib, stdenv, fetchurl, texinfo, alsa-lib, libpulseaudio, CoreAudio }: let inherit (lib) optional optionalString; @@ -11,7 +11,7 @@ in stdenv.mkDerivation rec { }; buildInputs = [ texinfo ] - ++ optional stdenv.isLinux alsaLib + ++ optional stdenv.isLinux alsa-lib ++ optional stdenv.isDarwin CoreAudio; propagatedBuildInputs = optional stdenv.isLinux libpulseaudio; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libndctl/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libndctl/default.nix index 91a2c378c0..6e82191e75 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libndctl/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libndctl/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, autoreconfHook -, asciidoctor, pkg-config, xmlto, docbook_xsl, docbook_xml_dtd_45, libxslt +, asciidoc, pkg-config, xmlto, docbook_xsl, docbook_xml_dtd_45, libxslt , json_c, kmod, which, util-linux, udev, keyutils }: @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { outputs = [ "out" "lib" "man" "dev" ]; nativeBuildInputs = - [ autoreconfHook asciidoctor pkg-config xmlto docbook_xml_dtd_45 docbook_xsl libxslt + [ autoreconfHook asciidoc pkg-config xmlto docbook_xml_dtd_45 docbook_xsl libxslt which ]; @@ -28,6 +28,7 @@ stdenv.mkDerivation rec { configureFlags = [ "--without-bash" "--without-systemd" + "--disable-asciidoctor" # depends on ruby 2.7, use asciidoc instead ]; patchPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/libraries/libnftnl/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libnftnl/default.nix index 44f0f8d62e..276ee52ed5 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libnftnl/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libnftnl/default.nix @@ -1,12 +1,12 @@ { lib, stdenv, fetchurl, pkg-config, libmnl }: stdenv.mkDerivation rec { - version = "1.1.9"; + version = "1.2.0"; pname = "libnftnl"; src = fetchurl { url = "https://netfilter.org/projects/${pname}/files/${pname}-${version}.tar.bz2"; - sha256 = "16jbp4fs5dz2yf4c3bl1sb48x9x9wi1chv39zwmfgya1k9pimcp9"; + sha256 = "1xblq1cbcxhr6qmjpy98i1qdza148idgz99vbhjc7s4vzvfizc4h"; }; nativeBuildInputs = [ pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libpcap/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libpcap/default.nix index a44fde0186..f3d3587c14 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libpcap/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libpcap/default.nix @@ -4,11 +4,11 @@ with lib; stdenv.mkDerivation rec { pname = "libpcap"; - version = "1.10.0"; + version = "1.10.1"; src = fetchurl { url = "https://www.tcpdump.org/release/${pname}-${version}.tar.gz"; - sha256 = "sha256-jRK0JiPu7+6HLxI70NyF1TWwDfTULoZfmTxA97/JKx4="; + sha256 = "sha256-7ShfSsyvBTRPkJdXV7Pb/ncrpB0cQBwmSLf6RbcRvdQ="; }; nativeBuildInputs = [ flex bison ] diff --git a/third_party/nixpkgs/pkgs/development/libraries/libpg_query/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libpg_query/default.nix index 711cfe14e1..98f657e293 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libpg_query/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libpg_query/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "libpg_query"; - version = "13-2.0.4"; + version = "13-2.0.5"; src = fetchFromGitHub { owner = "pganalyze"; repo = "libpg_query"; rev = version; - sha256 = "0d88fh613kh1izb6w288bfh7s3db4nz8cxyhmhq3lb7gl4axs2pv"; + sha256 = "1jr95hrqmxdqvn1546x04hdhp1aq7dv7881rspar14ksz7f7382r"; }; nativeBuildInputs = [ which ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libpqxx/6.nix b/third_party/nixpkgs/pkgs/development/libraries/libpqxx/6.nix new file mode 100644 index 0000000000..feb9c7e651 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libpqxx/6.nix @@ -0,0 +1,30 @@ +{ lib, stdenv, fetchFromGitHub, postgresql, doxygen, xmlto, python2, gnused }: + +stdenv.mkDerivation rec { + pname = "libpqxx"; + version = "6.4.5"; + + src = fetchFromGitHub { + owner = "jtv"; + repo = pname; + rev = version; + sha256 = "0djmjr2b5x5nd2a4idv5j8s6w0kdmvil910iv1kyc7x94dirbrni"; + }; + + nativeBuildInputs = [ gnused python2 ]; + buildInputs = [ postgresql doxygen xmlto ]; + + preConfigure = '' + patchShebangs . + ''; + + configureFlags = [ "--enable-shared" ]; + + meta = { + description = "A C++ library to access PostgreSQL databases"; + homepage = "http://pqxx.org/development/libpqxx/"; + license = lib.licenses.bsd3; + platforms = lib.platforms.unix; + maintainers = [ lib.maintainers.eelco ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/libpqxx/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libpqxx/default.nix index feb9c7e651..a1d9911751 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libpqxx/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libpqxx/default.nix @@ -1,24 +1,24 @@ -{ lib, stdenv, fetchFromGitHub, postgresql, doxygen, xmlto, python2, gnused }: +{ lib, stdenv, fetchFromGitHub, postgresql, python3, gnused }: stdenv.mkDerivation rec { pname = "libpqxx"; - version = "6.4.5"; + version = "7.5.2"; src = fetchFromGitHub { owner = "jtv"; repo = pname; rev = version; - sha256 = "0djmjr2b5x5nd2a4idv5j8s6w0kdmvil910iv1kyc7x94dirbrni"; + sha256 = "15ifd28v6xbbx931icydy8xmkd8030b20xzqjja6vwwvzss2w9fa"; }; - nativeBuildInputs = [ gnused python2 ]; - buildInputs = [ postgresql doxygen xmlto ]; + nativeBuildInputs = [ gnused python3 ]; + buildInputs = [ postgresql ]; preConfigure = '' - patchShebangs . + patchShebangs ./tools/splitconfig ''; - configureFlags = [ "--enable-shared" ]; + configureFlags = [ "--enable-shared --disable-documentation" ]; meta = { description = "A C++ library to access PostgreSQL databases"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libpsl/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libpsl/default.nix index e68219f634..85afe93ea7 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libpsl/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libpsl/default.nix @@ -14,7 +14,9 @@ , publicsuffix-list }: -stdenv.mkDerivation rec { +let + enableValgrindTests = !stdenv.isDarwin && lib.meta.availableOn stdenv.hostPlatform valgrind; +in stdenv.mkDerivation rec { pname = "libpsl"; version = "0.21.0"; @@ -32,7 +34,7 @@ stdenv.mkDerivation rec { pkg-config python3 libxslt - ] ++ lib.optionals (!stdenv.isDarwin) [ + ] ++ lib.optionals enableValgrindTests [ valgrind ]; @@ -60,7 +62,7 @@ stdenv.mkDerivation rec { "--with-psl-distfile=${publicsuffix-list}/share/publicsuffix/public_suffix_list.dat" "--with-psl-file=${publicsuffix-list}/share/publicsuffix/public_suffix_list.dat" "--with-psl-testfile=${publicsuffix-list}/share/publicsuffix/test_psl.txt" - ] ++ lib.optionals (!stdenv.isDarwin) [ + ] ++ lib.optionals enableValgrindTests [ "--enable-valgrind-tests" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libqmi/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libqmi/default.nix index 8a3179b034..a812a2d784 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libqmi/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libqmi/default.nix @@ -15,13 +15,13 @@ stdenv.mkDerivation rec { pname = "libqmi"; - version = "1.28.2"; + version = "1.28.4"; outputs = [ "out" "dev" "devdoc" ]; src = fetchurl { url = "https://www.freedesktop.org/software/libqmi/${pname}-${version}.tar.xz"; - sha256 = "jIw+5xmHTSUpvOmzWwKP5DWzbwA5eaNg060JOESdt4M="; + sha256 = "sha256-OxTNKrUiGnrbs5/tFu9pdTjqHHkwiCGtLRm1BeHarqA="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/libqtav/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libqtav/default.nix index fc577d7e50..e9a54dc478 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libqtav/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libqtav/default.nix @@ -2,7 +2,7 @@ , qtbase, qtmultimedia, qtquick1, qttools , libGL, libX11 , libass, openal, ffmpeg, libuchardet -, alsaLib, libpulseaudio, libva +, alsa-lib, libpulseaudio, libva }: with lib; @@ -16,7 +16,7 @@ mkDerivation rec { qtbase qtmultimedia qtquick1 libGL libX11 libass openal ffmpeg libuchardet - alsaLib libpulseaudio libva + alsa-lib libpulseaudio libva ]; src = fetchFromGitHub { diff --git a/third_party/nixpkgs/pkgs/development/libraries/libquotient/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libquotient/default.nix index f4fe894eaf..7c89e98576 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libquotient/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libquotient/default.nix @@ -2,13 +2,13 @@ mkDerivation rec { pname = "libquotient"; - version = "0.6.6"; + version = "0.6.7"; src = fetchFromGitHub { owner = "quotient-im"; repo = "libQuotient"; rev = version; - sha256 = "sha256-QSpkcQEDTMsFbQBa7dTuL/5HraVChUHqUuJdNMty/4s="; + sha256 = "sha256-fAzYv9OsanXqocEvbSB3OA9OVicwcZ0xT9uYbrFPEHc="; }; buildInputs = [ qtbase qtmultimedia ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/librealsense/default.nix b/third_party/nixpkgs/pkgs/development/libraries/librealsense/default.nix index 4015ab02a3..0011dc2f6e 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/librealsense/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/librealsense/default.nix @@ -1,6 +1,16 @@ -{ stdenv, config, lib, fetchFromGitHub, cmake, libusb1, ninja, pkg-config, gcc +{ stdenv +, config +, lib +, fetchFromGitHub +, fetchpatch +, cmake +, libusb1 +, ninja +, pkg-config +, gcc , cudaSupport ? config.cudaSupport or false, cudatoolkit -, enablePython ? false, pythonPackages ? null }: +, enablePython ? false, pythonPackages ? null +}: assert cudaSupport -> cudatoolkit != null; assert enablePython -> pythonPackages != null; @@ -24,7 +34,13 @@ stdenv.mkDerivation rec { ] ++ lib.optional cudaSupport cudatoolkit ++ lib.optionals enablePython (with pythonPackages; [python pybind11 ]); - patches = lib.optionals enablePython [ + patches = [ + # fix build on aarch64-darwin + # https://github.com/IntelRealSense/librealsense/pull/9253 + (fetchpatch { + url = "https://github.com/IntelRealSense/librealsense/commit/beb4c44debc8336de991c983274cad841eb5c323.patch"; + sha256 = "05mxsd2pz3xrvywdqyxkwdvxx8hjfxzcgl51897avz4v2j89pyq8"; + }) ./py_sitepackage_dir.patch ./py_pybind11_no_external_download.patch ]; @@ -57,6 +73,6 @@ stdenv.mkDerivation rec { homepage = "https://github.com/IntelRealSense/librealsense"; license = licenses.asl20; maintainers = with maintainers; [ brian-dawn ]; - platforms = [ "i686-linux" "x86_64-linux" "x86_64-darwin" ]; + platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/librime/default.nix b/third_party/nixpkgs/pkgs/development/libraries/librime/default.nix index eb9c514d59..3a2ca1e18c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/librime/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/librime/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "librime"; - version = "1.7.2"; + version = "1.7.3"; src = fetchFromGitHub { owner = "rime"; repo = pname; rev = version; - sha256 = "023c7bpfnyf8wlrssn89ziwsjccflyanrxlaqmwcbx8a5dvipk01"; + sha256 = "sha256-GzNMwyJR9PgJN0eGYbnBW6LS3vo4SUVLdyNG9kcEE18="; }; nativeBuildInputs = [ cmake pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/librsvg/default.nix b/third_party/nixpkgs/pkgs/development/libraries/librsvg/default.nix index 02cd9accba..c5e4b6e821 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/librsvg/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/librsvg/default.nix @@ -22,13 +22,13 @@ stdenv.mkDerivation rec { pname = "librsvg"; - version = "2.50.5"; + version = "2.50.6"; outputs = [ "out" "dev" "installedTests" ]; src = fetchurl { url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "0wlj5g1jgp93sj3rr6qspj282whz13ahnv8ca99d7zilq9s1aw1j"; + sha256 = "iAdJGZOoevVgxdP1I7jUpLugxQilYPH5NxdytRR3rFc="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/libsass/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libsass/default.nix index f4caa22b32..9b61ce65d4 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libsass/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libsass/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "libsass"; - version = "3.6.4"; + version = "3.6.5"; src = fetchFromGitHub { owner = "sass"; repo = pname; rev = version; - sha256 = "074kvacdan85h4qrvsk97575ys9xgkc044gplz3m6vn4a8pcl2rn"; + sha256 = "1cxj6r85d5f3qxdwzxrmkx8z875hig4cr8zsi30w6vj23cyds3l2"; # Remove unicode file names which leads to different checksums on HFS+ # vs. other filesystems because of unicode normalisation. extraPostFetch = '' diff --git a/third_party/nixpkgs/pkgs/development/libraries/libserdes/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libserdes/default.nix new file mode 100644 index 0000000000..7b48f150c9 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libserdes/default.nix @@ -0,0 +1,61 @@ +{ stdenv +, lib +, fetchFromGitHub +, perl +, boost +, rdkafka +, jansson +, curl +, avro-c +, avro-cpp }: + +stdenv.mkDerivation rec { + pname = "libserdes"; + version = "6.2.0"; + + src = fetchFromGitHub { + owner = "confluentinc"; + repo = pname; + rev = "v${version}"; + sha256 = "194ras18xw5fcnjgg1isnb24ydx9040ndciniwcbdb7w7wd901gc"; + }; + + outputs = [ "dev" "out" ]; + + nativeBuildInputs = [ perl ]; + + buildInputs = [ boost rdkafka jansson curl avro-c avro-cpp ]; + + makeFlags = [ "GEN_PKG_CONFIG=y" ]; + + postPatch = '' + patchShebangs configure lds-gen.pl + ''; + + # Has a configure script but it’s not Autoconf so steal some bits from multiple-outputs.sh: + setOutputFlags = false; + + preConfigure = '' + configureFlagsArray+=( + "--libdir=''${!outputLib}/lib" + "--includedir=''${!outputInclude}/include" + ) + ''; + + preInstall = '' + installFlagsArray+=("pkgconfigdir=''${!outputDev}/lib/pkgconfig") + ''; + + # Header files get installed with executable bit for some reason; get rid of it. + postInstall = '' + chmod -x ''${!outputInclude}/include/libserdes/*.h + ''; + + meta = with lib; { + description = "A schema-based serializer/deserializer C/C++ library with support for Avro and the Confluent Platform Schema Registry"; + homepage = "https://github.com/confluentinc/libserdes"; + license = licenses.asl20; + maintainers = with maintainers; [ liff ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/libsidplayfp/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libsidplayfp/default.nix index 97991a0cff..fe02a96a56 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libsidplayfp/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libsidplayfp/default.nix @@ -1,7 +1,7 @@ { stdenv , lib , fetchFromGitHub -, fetchpatch +, nix-update-script , autoreconfHook , pkg-config , perl @@ -16,29 +16,16 @@ stdenv.mkDerivation rec { pname = "libsidplayfp"; - version = "2.1.1"; + version = "2.2.0"; src = fetchFromGitHub { owner = "libsidplayfp"; repo = "libsidplayfp"; rev = "v${version}"; fetchSubmodules = true; - sha256 = "0487gap2b0ypikyra74lk1qwqwr0vncldamk5xb1db2x97v504fd"; + sha256 = "sha256-lDM4nJozZF8Rt+XWnM41hBAYatZVsmvvQajgHLI9uy0="; }; - # https://github.com/libsidplayfp/libsidplayfp/issues/13 - # Remove on next version bump - patches = [ - (fetchpatch { - url = "https://github.com/libsidplayfp/libsidplayfp/commit/84f5498f5653261ed84328e1b5676c31e3ba9e6e.patch"; - sha256 = "1vysbl4fkdzm11k40msng2ag6i6mb6z9jsw32vyj9calcfha5957"; - }) - (fetchpatch { - url = "https://github.com/libsidplayfp/libsidplayfp/commit/c1a1b732cc2e791d910522d58f47c6d094493c6d.patch"; - sha256 = "1d3sgdly0q9dysgkx5afxbwfas6p0m8n3lw1hmj4n6wm3j9sdz4g"; - }) - ]; - postPatch = '' patchShebangs . ''; @@ -72,6 +59,12 @@ stdenv.mkDerivation rec { mv docs/html $doc/share/doc/libsidplayfp/ ''; + passthru = { + updateScript = nix-update-script { + attrPath = pname; + }; + }; + meta = with lib; { description = "A library to play Commodore 64 music derived from libsidplay2"; longDescription = '' diff --git a/third_party/nixpkgs/pkgs/development/libraries/libslirp/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libslirp/default.nix index 5da6cf6bbb..f4eaa9c319 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libslirp/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libslirp/default.nix @@ -9,14 +9,14 @@ stdenv.mkDerivation rec { pname = "libslirp"; - version = "4.5.0"; + version = "4.6.1"; src = fetchFromGitLab { domain = "gitlab.freedesktop.org"; owner = "slirp"; repo = pname; rev = "v${version}"; - sha256 = "sha256-UdKBED7xR0gDf3aj3+6I62CnAwGP7XxskaFzWeUUkkk="; + sha256 = "sha256-AM6NxO4hjFiUAzRYbXV3fe18xwCBmzdM63n93UOxjKw="; }; nativeBuildInputs = [ meson ninja pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libsoundio/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libsoundio/default.nix index ac9f3b2565..2ef629e546 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libsoundio/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libsoundio/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, cmake, alsaLib, libjack2, libpulseaudio, AudioUnit }: +{ lib, stdenv, fetchFromGitHub, cmake, alsa-lib, libjack2, libpulseaudio, AudioUnit }: stdenv.mkDerivation rec { version = "2.0.0"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; buildInputs = [ libjack2 libpulseaudio ] - ++ lib.optional stdenv.isLinux alsaLib + ++ lib.optional stdenv.isLinux alsa-lib ++ lib.optional stdenv.isDarwin AudioUnit; NIX_CFLAGS_COMPILE = lib.optionalString stdenv.isDarwin "-Wno-strict-prototypes"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libspotify/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libspotify/default.nix index 004460abe3..d9be4a2964 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libspotify/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libspotify/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, libspotify, alsaLib, readline, pkg-config, apiKey ? null, unzip, gnused }: +{ lib, stdenv, fetchurl, libspotify, alsa-lib, readline, pkg-config, apiKey ? null, unzip, gnused }: let version = "12.1.51"; @@ -67,7 +67,7 @@ else stdenv.mkDerivation { src = libspotify.src; nativeBuildInputs = [ pkg-config ]; buildInputs = [ libspotify readline ] - ++ lib.optional (!stdenv.isDarwin) alsaLib; + ++ lib.optional (!stdenv.isDarwin) alsa-lib; postUnpack = "sourceRoot=$sourceRoot/share/doc/libspotify/examples"; patchPhase = "cp ${apiKey} appkey.c"; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/libraries/libtasn1/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libtasn1/default.nix index 2239d7311f..4d7b57c1f0 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libtasn1/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libtasn1/default.nix @@ -1,11 +1,11 @@ { lib, stdenv, fetchurl, perl, texinfo }: stdenv.mkDerivation rec { - name = "libtasn1-4.16.0"; + name = "libtasn1-4.17.0"; src = fetchurl { url = "mirror://gnu/libtasn1/${name}.tar.gz"; - sha256 = "179jskl7dmfp1rd2khkzmlibzgki4wi6hvmmwfv7q49r728b03qf"; + sha256 = "sha256-7OdVHOp5IrjhDX68cLwiSNH91zNRZGotao1oqUIcRaU="; }; outputs = [ "out" "dev" "devdoc" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libtgvoip/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libtgvoip/default.nix index 920315bb1b..8ffd077312 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libtgvoip/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libtgvoip/default.nix @@ -1,24 +1,41 @@ -{ stdenv, lib, fetchFromGitHub, pkg-config, autoreconfHook -, openssl, libopus, alsaLib, libpulseaudio +{ stdenv, lib, fetchFromGitHub, fetchpatch +, pkg-config, autoreconfHook +, openssl, libopus, alsa-lib, libpulseaudio }: with lib; stdenv.mkDerivation rec { pname = "libtgvoip"; - version = "unstable-2020-03-02"; + version = "unstable-2021-01-01"; src = fetchFromGitHub { owner = "telegramdesktop"; repo = "libtgvoip"; - rev = "e422d2a80546a32ab7166a9b1058bacfc5daeefc"; - sha256 = "0n6f7215k74039j0zmicjzhj6f45mq6fvkrwzyzibcrv87ib17fc"; + rev = "13a5fcb16b04472d808ce122abd695dbf5d206cd"; + sha256 = "12p6s7vxkf1gh1spdckkdxrx7bjzw881ds9bky7l5fw751cwb3xd"; }; + # To fix the build without external webrtc: + patches = [ + (fetchpatch { + # Use methods from updated webrtc. + url = "https://github.com/telegramdesktop/libtgvoip/commit/13a5fcb16b04472d808ce122abd695dbf5d206cd.patch"; + sha256 = "0wapqvml3yyv5dlp2q8iih5rfvfnkngll69krhnw5xsdjy22sp7r"; + revert = true; + }) + (fetchpatch { + # Allow working with external webrtc. + url = "https://github.com/telegramdesktop/libtgvoip/commit/6e82b6e45664c1f80b9039256c99bebc76d34672.patch"; + sha256 = "0m87ixja70vnm80a9z4gxk0yl7n64y59smczxb88lxnj6kdgih7x"; + revert = true; + }) + ]; + outputs = [ "out" "dev" ]; nativeBuildInputs = [ pkg-config autoreconfHook ]; - buildInputs = [ openssl libopus alsaLib libpulseaudio ]; + buildInputs = [ openssl libopus alsa-lib libpulseaudio ]; enableParallelBuilding = true; meta = { diff --git a/third_party/nixpkgs/pkgs/development/libraries/libubox/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libubox/default.nix index f8dfa80a95..9261d1b81b 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libubox/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libubox/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation { pname = "libubox"; - version = "unstable-2020-01-20"; + version = "unstable-2021-03-09"; src = fetchgit { url = "https://git.openwrt.org/project/libubox.git"; - rev = "43a103ff17ee5872669f8712606578c90c14591d"; - sha256 = "0cihgckghamcfxrvqjjn69giib80xhsqaj98ldn0gd96zqh96sd4"; + rev = "551d75b5662cccd0466b990d58136bdf799a804d"; + sha256 = "05cnjjqjv9nvrs1d8pg4xxxf27jryiv6xk8plmdpmm7r2wkvwn3r"; }; cmakeFlags = [ "-DBUILD_LUA=OFF" "-DBUILD_EXAMPLES=OFF" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libusbmuxd/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libusbmuxd/default.nix index 66198a6ec3..7bba6e8b40 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libusbmuxd/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libusbmuxd/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "libusbmuxd"; - version = "2.0.2"; + version = "unstable-2021-02-06"; src = fetchFromGitHub { owner = "libimobiledevice"; repo = pname; - rev = version; - sha256 = "139pzsnixkck6ly1q6p0diqr0hgd0mx0pr4xx1jamm3f3656kpf9"; + rev = "3eb50a07bad4c2222e76df93b23a0161922150d1"; + sha256 = "sha256-pBPBgE6s8JYKJYEV8CcumNki+6jD5r7HzQ0nZ8yQLdM="; }; nativeBuildInputs = [ autoreconfHook pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libva/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libva/default.nix index 69a5932685..32ecc34a28 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libva/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libva/default.nix @@ -7,13 +7,13 @@ stdenv.mkDerivation rec { name = "libva-${lib.optionalString minimal "minimal-"}${version}"; - version = "2.11.0"; + version = "2.12.0"; src = fetchFromGitHub { owner = "intel"; repo = "libva"; rev = version; - sha256 = "0qk30p53mnwiqh2x68vyif11vg3gyjvw8v4qihg099m41qb44hws"; + sha256 = "1zfv4kjx0715sy62lkpv0s31f9xwy232z5zwqi5all4w1jr630i7"; }; outputs = [ "dev" "out" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libva/utils.nix b/third_party/nixpkgs/pkgs/development/libraries/libva/utils.nix index c358ebb1a7..6b5246d09e 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libva/utils.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libva/utils.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "libva-utils"; - version = "2.11.1"; + version = "2.12.0"; src = fetchFromGitHub { owner = "intel"; repo = "libva-utils"; rev = version; - sha256 = "1arp5r0csahjbbsmdmf0dzpgwcpps9s2hlh68lgg6n5n85zkd4b5"; + sha256 = "1a4d75gc7rcfwpsh7fn8mygvi4w0jym4szdhw6jpfywvll37lffi"; }; nativeBuildInputs = [ meson ninja pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libvori/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libvori/default.nix new file mode 100644 index 0000000000..2eb7bffbdf --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libvori/default.nix @@ -0,0 +1,21 @@ +{ stdenv, lib, fetchurl, cmake }: + +stdenv.mkDerivation rec { + pname = "libvori"; + version = "210412"; + + src = fetchurl { + url = "https://brehm-research.de/files/${pname}-${version}.tar.gz"; + sha256 = "1b4hpwibf3k7gl6n984l3wdi0zyl2fmpz84m9g2di4yhm6p8c61k"; + }; + + nativeBuildInputs = [ cmake ]; + + meta = with lib; { + description = "Library for Voronoi intergration of electron densities"; + homepage = "https://brehm-research.de/libvori.php"; + license = with licenses; [ lgpl3Only ]; + platforms = platforms.unix; + maintainers = [ maintainers.sheepforce ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/libwacom/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libwacom/default.nix index c17b8be592..5bb6445ac3 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libwacom/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libwacom/default.nix @@ -1,8 +1,8 @@ -{ lib, stdenv, fetchFromGitHub, meson, ninja, glib, pkg-config, udev, libgudev, doxygen }: +{ lib, stdenv, fetchFromGitHub, meson, ninja, glib, pkg-config, udev, libgudev, doxygen, python3 }: stdenv.mkDerivation rec { pname = "libwacom"; - version = "1.9"; + version = "1.10"; outputs = [ "out" "dev" ]; @@ -10,10 +10,10 @@ stdenv.mkDerivation rec { owner = "linuxwacom"; repo = "libwacom"; rev = "libwacom-${version}"; - sha256 = "sha256-o1xCSrWKPzz1GePEVB1jgx2cGzRtw0I6c4wful08Vx4="; + sha256 = "sha256-Q7b54AMAxdIzN7TUuhIdlrXaVtj2szV4n3y9bAE0LsU="; }; - nativeBuildInputs = [ pkg-config meson ninja doxygen ]; + nativeBuildInputs = [ pkg-config meson ninja doxygen python3 ]; mesonFlags = [ "-Dtests=disabled" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libwnck/2.nix b/third_party/nixpkgs/pkgs/development/libraries/libwnck/2.nix new file mode 100644 index 0000000000..fd7d80574a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/libwnck/2.nix @@ -0,0 +1,30 @@ +{ lib, stdenv, fetchurl, pkg-config, gtk2, intltool, xorg }: + +stdenv.mkDerivation rec { + pname = "libwnck"; + version = "2.31.0"; + + src = fetchurl { + url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + sha256 = "17isfjvrzgj5znld2a7zsk9vd39q9wnsysnw5jr8iz410z935xw3"; + }; + + outputs = [ "out" "dev" "devdoc" ]; + outputBin = "dev"; + + nativeBuildInputs = [ pkg-config ]; + buildInputs = [ gtk2 intltool xorg.libX11 xorg.libXres ]; + # ?another optional: startup-notification + + configureFlags = [ "--disable-introspection" ]; # not needed anywhere AFAIK + + meta = { + description = "A library for creating task lists and pagers"; + homepage = "https://gitlab.gnome.org/GNOME/libwnck"; + license = lib.licenses.lgpl21; + maintainers = with lib.maintainers; [ johnazoidberg ]; + # ./xutils.h:31:10: fatal error: 'gdk/gdkx.h' file not found + # #include + broken = stdenv.isDarwin; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/libwnck/3.x.nix b/third_party/nixpkgs/pkgs/development/libraries/libwnck/3.x.nix deleted file mode 100644 index 425a1bab35..0000000000 --- a/third_party/nixpkgs/pkgs/development/libraries/libwnck/3.x.nix +++ /dev/null @@ -1,76 +0,0 @@ -{ lib, stdenv -, fetchurl -, fetchpatch -, meson -, ninja -, pkg-config -, gtk-doc -, docbook_xsl -, docbook_xml_dtd_412 -, libX11 -, glib -, gtk3 -, pango -, cairo -, libXres -, libstartup_notification -, gettext -, gobject-introspection -, gnome -}: - -stdenv.mkDerivation rec { - pname = "libwnck"; - version = "3.36.0"; - - outputs = [ "out" "dev" "devdoc" ]; - outputBin = "dev"; - - src = fetchurl { - url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "0pwjdhca9lz2n1gf9b60xf0m6ipf9snp8rqf9csj4pgdnd882l5w"; - }; - - nativeBuildInputs = [ - meson - ninja - pkg-config - gettext - gobject-introspection - gtk-doc - docbook_xsl - docbook_xml_dtd_412 - ]; - - buildInputs = [ - libX11 - libstartup_notification - pango - cairo - libXres - ]; - - propagatedBuildInputs = [ - glib - gtk3 - ]; - - mesonFlags = [ - "-Dgtk_doc=true" - ]; - - passthru = { - updateScript = gnome.updateScript { - packageName = pname; - attrPath = "${pname}${lib.versions.major version}"; - versionPolicy = "odd-unstable"; - }; - }; - - meta = with lib; { - description = "Library to manage X windows and workspaces (via pagers, tasklists, etc.)"; - license = licenses.lgpl21Plus; - platforms = platforms.linux; - maintainers = [ ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/development/libraries/libwnck/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libwnck/default.nix index fd7d80574a..39a1d505b6 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libwnck/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libwnck/default.nix @@ -1,30 +1,76 @@ -{ lib, stdenv, fetchurl, pkg-config, gtk2, intltool, xorg }: +{ lib, stdenv +, fetchurl +, fetchpatch +, meson +, ninja +, pkg-config +, gtk-doc +, docbook_xsl +, docbook_xml_dtd_412 +, libX11 +, glib +, gtk3 +, pango +, cairo +, libXres +, libstartup_notification +, gettext +, gobject-introspection +, gnome +}: stdenv.mkDerivation rec { pname = "libwnck"; - version = "2.31.0"; - - src = fetchurl { - url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "17isfjvrzgj5znld2a7zsk9vd39q9wnsysnw5jr8iz410z935xw3"; - }; + version = "3.36.0"; outputs = [ "out" "dev" "devdoc" ]; outputBin = "dev"; - nativeBuildInputs = [ pkg-config ]; - buildInputs = [ gtk2 intltool xorg.libX11 xorg.libXres ]; - # ?another optional: startup-notification + src = fetchurl { + url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + sha256 = "0pwjdhca9lz2n1gf9b60xf0m6ipf9snp8rqf9csj4pgdnd882l5w"; + }; - configureFlags = [ "--disable-introspection" ]; # not needed anywhere AFAIK + nativeBuildInputs = [ + meson + ninja + pkg-config + gettext + gobject-introspection + gtk-doc + docbook_xsl + docbook_xml_dtd_412 + ]; - meta = { - description = "A library for creating task lists and pagers"; - homepage = "https://gitlab.gnome.org/GNOME/libwnck"; - license = lib.licenses.lgpl21; - maintainers = with lib.maintainers; [ johnazoidberg ]; - # ./xutils.h:31:10: fatal error: 'gdk/gdkx.h' file not found - # #include - broken = stdenv.isDarwin; + buildInputs = [ + libX11 + libstartup_notification + pango + cairo + libXres + ]; + + propagatedBuildInputs = [ + glib + gtk3 + ]; + + mesonFlags = [ + "-Dgtk_doc=true" + ]; + + passthru = { + updateScript = gnome.updateScript { + packageName = pname; + attrPath = "${pname}${lib.versions.major version}"; + versionPolicy = "odd-unstable"; + }; + }; + + meta = with lib; { + description = "Library to manage X windows and workspaces (via pagers, tasklists, etc.)"; + license = licenses.lgpl21Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ liff ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/libwpe/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libwpe/default.nix index 9e7886eb68..1fcb91a7fb 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libwpe/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libwpe/default.nix @@ -10,11 +10,11 @@ stdenv.mkDerivation rec { pname = "libwpe"; - version = "1.10.0"; + version = "1.10.1"; src = fetchurl { url = "https://wpewebkit.org/releases/${pname}-${version}.tar.xz"; - sha256 = "sha256-JBXicNReNZXtQFK8EF9zN0TcLTZ34S/0qDHlAphBCE0="; + sha256 = "sha256-oyez/88jVtvoFIwdtLvcU1nX5xY9F39nVRqDk7FErfA="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/libxc/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libxc/default.nix index 48c5a4f9b4..95ce240622 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libxc/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libxc/default.nix @@ -1,7 +1,7 @@ { lib, stdenv, fetchFromGitLab, cmake, gfortran, perl }: let - version = "5.1.4"; + version = "5.1.5"; in stdenv.mkDerivation { pname = "libxc"; @@ -11,7 +11,7 @@ in stdenv.mkDerivation { owner = "libxc"; repo = "libxc"; rev = version; - sha256 = "0rs6v72zz3jr22r29zxxdk8wdsfv6wid6cx2661974z09dbvbr1f"; + sha256 = "0cy3x2zn1bldc5i0rzislfbc8h4nqgds445jkfqjv0d1shvdy0zn"; }; buildInputs = [ gfortran ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/libxml2/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libxml2/default.nix index ca3cbc4a18..1b58b4539e 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libxml2/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libxml2/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchurl +{ stdenv, lib, fetchurl, fetchpatch , zlib, xz, libintl, python, gettext, ncurses, findXMLCatalogs , pythonSupport ? enableShared && stdenv.buildPlatform == stdenv.hostPlatform , icuSupport ? false, icu ? null @@ -27,6 +27,13 @@ stdenv.mkDerivation rec { # https://github.com/NixOS/nixpkgs/pull/63174 # https://github.com/NixOS/nixpkgs/pull/72342 ./utf8-xmlErrorFuncHandler.patch + + # Work around lxml API misuse. + # https://gitlab.gnome.org/GNOME/libxml2/issues/255 + (fetchpatch { + url = "https://gitlab.gnome.org/GNOME/libxml2/commit/85b1792e37b131e7a51af98a37f92472e8de5f3f.patch"; + sha256 = "epqlNs2S0Zczox3KyCB6R2aJKh87lXydlZ0x6tLHweE="; + }) ]; outputs = [ "bin" "dev" "out" "man" "doc" ] diff --git a/third_party/nixpkgs/pkgs/development/libraries/libxmp/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libxmp/default.nix index 31a14ff6ae..d78bb1a7d9 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libxmp/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libxmp/default.nix @@ -1,7 +1,7 @@ { lib, stdenv, fetchurl }: stdenv.mkDerivation rec { - name = "libxmp-4.4.1"; + name = "libxmp-4.5.0"; meta = with lib; { description = "Extended module player library"; @@ -17,6 +17,6 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://sourceforge/xmp/libxmp/${name}.tar.gz"; - sha256 = "1kycz4jsyvmf7ny9227b497wc7y5ligydi6fvvldmkf8hk63ad9m"; + sha256 = "sha256-eEfSYhEtFOhEL0TlrG7Z3bylTCUShHILVjyFKzHybnU="; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/libzip/default.nix b/third_party/nixpkgs/pkgs/development/libraries/libzip/default.nix index a3f7f3ef5f..3620943d6c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/libzip/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/libzip/default.nix @@ -1,6 +1,5 @@ { lib, stdenv , cmake -, fetchpatch , fetchurl , perl , zlib @@ -11,32 +10,27 @@ , xz , withOpenssl ? false , openssl +, withZstd ? false +, zstd }: stdenv.mkDerivation rec { pname = "libzip"; - version = "1.7.3"; + version = "1.8.0"; src = fetchurl { url = "https://libzip.org/download/${pname}-${version}.tar.gz"; - sha256 = "1k5rihiz7m1ahhjzcbq759hb9crzqkgw78pkxga118y5a32pc8hf"; + sha256 = "17l3ygrnbszm3b99dxmw94wcaqpbljzg54h4c0y8ss8aij35bvih"; }; - # Remove in next release - patches = [ - (fetchpatch { - url = "https://github.com/nih-at/libzip/commit/351201419d79b958783c0cfc7c370243165523ac.patch"; - sha256 = "0d93z98ki0yiaza93268cxkl35y1r7ll9f7l8sivx3nfxj2c1n8a"; - }) - ]; - outputs = [ "out" "dev" "man" ]; nativeBuildInputs = [ cmake perl groff ]; propagatedBuildInputs = [ zlib ]; buildInputs = lib.optionals withLZMA [ xz ] ++ lib.optionals withBzip2 [ bzip2 ] - ++ lib.optionals withOpenssl [ openssl ]; + ++ lib.optionals withOpenssl [ openssl ] + ++ lib.optionals withZstd [ zstd ]; preCheck = '' # regress/runtest is a generated file diff --git a/third_party/nixpkgs/pkgs/development/libraries/lirc/default.nix b/third_party/nixpkgs/pkgs/development/libraries/lirc/default.nix index 6b7f0c102e..b93cc96bde 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/lirc/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/lirc/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, fetchpatch, autoreconfHook, pkg-config, help2man, python3, - alsaLib, xlibsWrapper, libxslt, systemd, libusb-compat-0_1, libftdi1 }: + alsa-lib, xlibsWrapper, libxslt, systemd, libusb-compat-0_1, libftdi1 }: stdenv.mkDerivation rec { name = "lirc-0.10.1"; @@ -33,7 +33,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook pkg-config help2man (python3.withPackages (p: with p; [ pyyaml setuptools ])) ]; - buildInputs = [ alsaLib xlibsWrapper libxslt systemd libusb-compat-0_1 libftdi1 ]; + buildInputs = [ alsa-lib xlibsWrapper libxslt systemd libusb-compat-0_1 libftdi1 ]; configureFlags = [ "--sysconfdir=/etc" diff --git a/third_party/nixpkgs/pkgs/development/libraries/lucene++/default.nix b/third_party/nixpkgs/pkgs/development/libraries/lucene++/default.nix index 2761329ea2..79e28cc7bb 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/lucene++/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/lucene++/default.nix @@ -1,13 +1,14 @@ -{ lib, stdenv, fetchurl, cmake, boost, gtest }: +{ lib, stdenv, fetchFromGitHub, cmake, boost, gtest }: stdenv.mkDerivation rec { pname = "lucene++"; version = "3.0.7"; - src = fetchurl { - url = "https://github.com/luceneplusplus/LucenePlusPlus/" - + "archive/rel_${version}.tar.gz"; - sha256 = "032yb35b381ifm7wb8cy2m3yndklnxyi5cgprjh48jqy641z46bc"; + src = fetchFromGitHub { + owner = "luceneplusplus"; + repo = "LucenePlusPlus"; + rev = "rel_${version}"; + sha256 = "06b37fly6l27zc6kbm93f6khfsv61w792j8xihfagpcm9cfz2zi1"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/libraries/mauikit/default.nix b/third_party/nixpkgs/pkgs/development/libraries/mauikit/default.nix index 22155a7a52..3991ee5551 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/mauikit/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/mauikit/default.nix @@ -39,6 +39,6 @@ mkDerivation rec { description = "Free and modular front-end framework for developing fast and compelling user experiences"; license = licenses.lgpl2Plus; maintainers = with maintainers; [ dotlambda ]; - broken = versionOlder qtbase.version "5.14.0"; + broken = versionOlder qtbase.version "5.15.0"; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/mediastreamer/default.nix b/third_party/nixpkgs/pkgs/development/libraries/mediastreamer/default.nix index 452031dc92..5d9cc98b1a 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/mediastreamer/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/mediastreamer/default.nix @@ -1,4 +1,4 @@ -{ alsaLib +{ alsa-lib , bctoolbox , bzrtp , cmake @@ -62,7 +62,7 @@ stdenv.mkDerivation rec { ]; propagatedBuildInputs = [ - alsaLib + alsa-lib bctoolbox bzrtp ffmpeg diff --git a/third_party/nixpkgs/pkgs/development/libraries/mesa/default.nix b/third_party/nixpkgs/pkgs/development/libraries/mesa/default.nix index 2b94f9c3bb..bdecfe0d57 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/mesa/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/mesa/default.nix @@ -4,14 +4,13 @@ , expat, libdrm, xorg, wayland, wayland-protocols, openssl , llvmPackages, libffi, libomxil-bellagio, libva-minimal , libelf, libvdpau -, libglvnd -, enableRadv ? true +, libglvnd, libunwind , galliumDrivers ? ["auto"] , driDrivers ? ["auto"] , vulkanDrivers ? ["auto"] , eglPlatforms ? [ "x11" ] ++ lib.optionals stdenv.isLinux [ "wayland" ] , OpenGL, Xplugin -, withValgrind ? stdenv.hostPlatform.isLinux && !stdenv.hostPlatform.isAarch32, valgrind-light +, withValgrind ? !stdenv.isDarwin && lib.meta.availableOn stdenv.hostPlatform valgrind-light, valgrind-light , enableGalliumNine ? stdenv.isLinux , enableOSMesa ? stdenv.isLinux }: @@ -32,7 +31,7 @@ with lib; let # Release calendar: https://www.mesa3d.org/release-calendar.html # Release frequency: https://www.mesa3d.org/releasing.html#schedule - version = "21.0.1"; + version = "21.1.3"; branch = versions.major version; self = stdenv.mkDerivation { @@ -46,7 +45,7 @@ self = stdenv.mkDerivation { "ftp://ftp.freedesktop.org/pub/mesa/${version}/mesa-${version}.tar.xz" "ftp://ftp.freedesktop.org/pub/mesa/older-versions/${branch}.x/${version}/mesa-${version}.tar.xz" ]; - sha256 = "1fqj2xhhd1ary0pfg31jq6fqcnd6qgyrw1445nmz554k8n2ck7rp"; + sha256 = "0s8yi7y63xsyqw19ihil18fykkjxr6ibcir2fvymz1vh4ql23qnb"; }; prePatch = "patchShebangs ."; @@ -65,6 +64,12 @@ self = stdenv.mkDerivation { url = "https://gitlab.freedesktop.org/mesa/mesa/commit/aebbf819df6d1e.patch"; sha256 = "17248hyzg43d73c86p077m4lv1pkncaycr3l27hwv9k4ija9zl8q"; }) + # For RISC-V support: + (fetchpatch { + name = "add-riscv-default-selections.patch"; + url = "https://gitlab.freedesktop.org/mesa/mesa/-/commit/9908da1b7a5eaf0156d458e0e24b694c070ba345.patch"; + sha256 = "036gv95m5gzzs6qpgkydf5fwgdlm7kpbdfalg8vmayghd260rw1w"; + }) ] ++ optionals (stdenv.isDarwin && stdenv.isAarch64) [ # Fix aarch64-darwin build, remove when upstreaam supports it out of the box. # See: https://gitlab.freedesktop.org/mesa/mesa/-/issues/1020 @@ -128,6 +133,7 @@ self = stdenv.mkDerivation { libpthreadstubs openssl /*or another sha1 provider*/ ] ++ lib.optionals (elem "wayland" eglPlatforms) [ wayland wayland-protocols ] ++ lib.optionals stdenv.isLinux [ libomxil-bellagio libva-minimal ] + ++ lib.optionals stdenv.isDarwin [ libunwind ] ++ lib.optional withValgrind valgrind-light; depsBuildBuild = [ pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/mesa/missing-includes.patch b/third_party/nixpkgs/pkgs/development/libraries/mesa/missing-includes.patch index 72488893c6..c17d549085 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/mesa/missing-includes.patch +++ b/third_party/nixpkgs/pkgs/development/libraries/mesa/missing-includes.patch @@ -9,14 +9,14 @@ #include "pipe/p_compiler.h" #include "pipe/p_state.h" ---- ./src/amd/vulkan/winsys/amdgpu/radv_amdgpu_winsys.h -+++ ./src/amd/vulkan/winsys/amdgpu/radv_amdgpu_winsys.h +--- a/src/amd/vulkan/winsys/amdgpu/radv_amdgpu_winsys.h ++++ b/src/amd/vulkan/winsys/amdgpu/radv_amdgpu_winsys.h @@ -28,6 +28,8 @@ #ifndef RADV_AMDGPU_WINSYS_H #define RADV_AMDGPU_WINSYS_H - + +#include + - #include "radv_radeon_winsys.h" - #include "ac_gpu_info.h" - #include "addrlib/addrinterface.h" + #include + #include + #include "util/list.h" diff --git a/third_party/nixpkgs/pkgs/development/libraries/mlt/default.nix b/third_party/nixpkgs/pkgs/development/libraries/mlt/default.nix index 021dc1c3d9..8bd2bc8036 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/mlt/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/mlt/default.nix @@ -2,6 +2,8 @@ , SDL, ffmpeg, frei0r, libjack2, libdv, libsamplerate, libexif , libvorbis, libxml2, movit, pkg-config, sox, fftw, opencv4, SDL2 , gtk2, genericUpdater, common-updater-scripts, libebur128 +, jack2, ladspa-sdk, swig, which, ncurses +, enablePython ? false, python }: stdenv.mkDerivation rec { @@ -16,18 +18,22 @@ stdenv.mkDerivation rec { }; buildInputs = [ - SDL ffmpeg frei0r libjack2 libdv libsamplerate libvorbis libxml2 - makeWrapper movit pkg-config sox libexif gtk2 fftw libebur128 - opencv4 SDL2 - ]; + SDL ffmpeg frei0r libjack2 libdv libsamplerate libvorbis libxml2.dev + movit sox libexif gtk2 fftw libebur128 opencv4 SDL2 jack2 + ladspa-sdk + ] ++ lib.optional enablePython ncurses; + + nativeBuildInputs = [ pkg-config makeWrapper which ] + ++ lib.optionals enablePython [ python swig ]; # Mostly taken from: # http://www.kdenlive.org/user-manual/downloading-and-installing-kdenlive/installing-source/installing-mlt-rendering-engine configureFlags = [ "--avformat-swscale" "--enable-gpl" "--enable-gpl3" "--enable-opengl" - ]; + ] ++ lib.optional enablePython "--swig-languages=python"; enableParallelBuilding = true; + outPythonPath = lib.optionalString enablePython "$(toPythonPath $out)"; postInstall = '' wrapProgram $out/bin/melt --prefix FREI0R_PATH : ${frei0r}/lib/frei0r-1 @@ -36,6 +42,11 @@ stdenv.mkDerivation rec { s=${movit.dev}/include t=$(for ((i = 0; i < ''${#s}; i++)); do echo -n X; done) sed -i $out/lib/mlt/libmltopengl.so -e "s|$s|$t|g" + '' + lib.optionalString enablePython '' + mkdir -p ${outPythonPath}/mlt + cp -a src/swig/python/_mlt.so ${outPythonPath}/mlt/ + cp -a src/swig/python/mlt.py ${outPythonPath}/mlt/__init__.py + sed -i ${outPythonPath}/mlt/__init__.py -e "s|return importlib.import_module('_mlt')|return importlib.import_module('mlt._mlt')|g" ''; passthru.updateScript = genericUpdater { @@ -47,7 +58,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "Open source multimedia framework, designed for television broadcasting"; homepage = "https://www.mltframework.org"; - license = licenses.gpl3; + license = with licenses; [ gpl3Only gpl2Only lgpl21Only ]; maintainers = with maintainers; [ tohl peti ]; platforms = platforms.linux; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/mvapich/default.nix b/third_party/nixpkgs/pkgs/development/libraries/mvapich/default.nix index 71c6ce38f9..704a28dbb8 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/mvapich/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/mvapich/default.nix @@ -56,9 +56,9 @@ stdenv.mkDerivation rec { done # Ensure the default compilers are the ones mvapich was built with - substituteInPlace $out/bin/mpicc --replace 'CC="gcc"' 'CC=${stdenv.cc}/bin/gcc' - substituteInPlace $out/bin/mpicxx --replace 'CXX="g++"' 'CC=${stdenv.cc}/bin/g++' - substituteInPlace $out/bin/mpifort --replace 'FC="gfortran"' 'CC=${gfortran}/bin/gfortran' + substituteInPlace $out/bin/mpicc --replace 'CC="gcc"' 'CC=${stdenv.cc}/bin/cc' + substituteInPlace $out/bin/mpicxx --replace 'CXX="g++"' 'CXX=${stdenv.cc}/bin/c++' + substituteInPlace $out/bin/mpifort --replace 'FC="gfortran"' 'FC=${gfortran}/bin/gfortran' ''; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/development/libraries/nco/default.nix b/third_party/nixpkgs/pkgs/development/libraries/nco/default.nix index 958be905f8..b7df32633b 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/nco/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/nco/default.nix @@ -1,10 +1,10 @@ -{ lib, stdenv, fetchzip, netcdf, netcdfcxx4, gsl, udunits, antlr, which, curl, flex, coreutils }: +{ lib, stdenv, fetchzip, netcdf, netcdfcxx4, gsl, udunits, antlr2, which, curl, flex, coreutils }: stdenv.mkDerivation rec { version = "4.9.8"; pname = "nco"; - nativeBuildInputs = [ flex which antlr ]; + nativeBuildInputs = [ flex which antlr2 ]; buildInputs = [ netcdf netcdfcxx4 gsl udunits curl coreutils ]; src = fetchzip { diff --git a/third_party/nixpkgs/pkgs/development/libraries/ncurses/default.nix b/third_party/nixpkgs/pkgs/development/libraries/ncurses/default.nix index 742de6cf92..dd1eea632e 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/ncurses/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/ncurses/default.nix @@ -42,6 +42,7 @@ stdenv.mkDerivation rec { ] ++ lib.optional unicode "--enable-widec" ++ lib.optional (!withCxx) "--without-cxx" ++ lib.optional (abiVersion == "5") "--with-abi-version=5" + ++ lib.optional stdenv.hostPlatform.isNetBSD "--enable-rpath" ++ lib.optionals stdenv.hostPlatform.isWindows [ "--enable-sp-funcs" "--enable-term-driver" diff --git a/third_party/nixpkgs/pkgs/development/libraries/nettle/default.nix b/third_party/nixpkgs/pkgs/development/libraries/nettle/default.nix index 3eec9c97ff..0e3c18c0ac 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/nettle/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/nettle/default.nix @@ -1,10 +1,10 @@ { callPackage, fetchurl }: callPackage ./generic.nix rec { - version = "3.7.2"; + version = "3.7.3"; src = fetchurl { url = "mirror://gnu/nettle/nettle-${version}.tar.gz"; - sha256 = "0qpi1qp3bcvqdsaxy2pzg530db95x8qjahkynxgwvr6dy5760ald"; + sha256 = "1w5wwc3q0r97d2ifhx77cw7y8s20bm8x52is9j93p2h47yq5w7v6"; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/nspr/default.nix b/third_party/nixpkgs/pkgs/development/libraries/nspr/default.nix index 159f343cf4..91532b3771 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/nspr/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/nspr/default.nix @@ -2,15 +2,13 @@ , CoreServices ? null , buildPackages }: -let version = "4.30"; in - -stdenv.mkDerivation { +stdenv.mkDerivation rec { pname = "nspr"; - inherit version; + version = "4.31"; src = fetchurl { url = "mirror://mozilla/nspr/releases/v${version}/src/nspr-${version}.tar.gz"; - sha256 = "0fwivizfz88625lwv1ngxirnal7w9csq1q9i7m6dr14l83wdhk4d"; + sha256 = "1j5b2m8cjlhnnv8sq34587avaagkqvh521w4f95miwgvsn3xlaap"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/nss/default.nix b/third_party/nixpkgs/pkgs/development/libraries/nss/default.nix index 962204268d..ced72d33e1 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/nss/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/nss/default.nix @@ -18,7 +18,7 @@ let # It will rebuild itself using the version of this package (NSS) and if # an update is required do the required changes to the expression. # Example: nix-shell ./maintainers/scripts/update.nix --argstr package cacert - version = "3.64"; + version = "3.67"; underscoreVersion = builtins.replaceStrings ["."] ["_"] version; in stdenv.mkDerivation rec { @@ -27,7 +27,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "mirror://mozilla/security/nss/releases/NSS_${underscoreVersion}_RTM/src/${pname}-${version}.tar.gz"; - sha256 = "09hivz4qf3dw7m21lshw34l0yncinwn4ax5w3rpkm71f2wkm85yk"; + sha256 = "0zyfi27lbdz1bmk9dmsivcya4phx25rzlxqcnjab69yd928rlm7n"; }; depsBuildBuild = [ buildPackages.stdenv.cc ]; @@ -106,7 +106,7 @@ in stdenv.mkDerivation rec { runHook postBuild ''; - NIX_CFLAGS_COMPILE = "-Wno-error -DNIX_NSS_LIBDIR=\"${placeholder "out"}/lib/\""; + NIX_CFLAGS_COMPILE = "-Wno-error -DNIX_NSS_LIBDIR=\"${placeholder "out"}/lib/\" " + lib.optionalString stdenv.hostPlatform.is64bit "-DNSS_USE_64=1"; installPhase = '' runHook preInstall diff --git a/third_party/nixpkgs/pkgs/development/libraries/nsss/default.nix b/third_party/nixpkgs/pkgs/development/libraries/nsss/default.nix index 4e71c4d65e..527e7d4898 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/nsss/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/nsss/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "nsss"; - version = "0.1.0.0"; - sha256 = "15rxbwf16wm1la079yr2xn4bccjgd7m8dh6r7bpr6s57cj93i2mq"; + version = "0.1.0.1"; + sha256 = "1nair10m7fddp50mpqnwj0qiggnh5qmnffmyzxis5l1ixcav1ir0"; description = "An implementation of a subset of the pwd.h, group.h and shadow.h family of functions."; diff --git a/third_party/nixpkgs/pkgs/development/libraries/nvidia-optical-flow-sdk/default.nix b/third_party/nixpkgs/pkgs/development/libraries/nvidia-optical-flow-sdk/default.nix index f9c2547d42..a82fa9068c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/nvidia-optical-flow-sdk/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/nvidia-optical-flow-sdk/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation { pname = "nvidia-optical-flow-sdk"; - version = "1.0"; + version = "2.0"; src = fetchFromGitHub { owner = "NVIDIA"; repo = "NVIDIAOpticalFlowSDK"; - rev = "79c6cee80a2df9a196f20afd6b598a9810964c32"; - sha256 = "1y6igwv75v1ynqm7j6la3ky0f15mgnj1jyyak82yvhcsx1aax0a1"; + rev = "edb50da3cf849840d680249aa6dbef248ebce2ca"; + sha256 = "0hv0m0k9wl2wjhhl886j7ymngnf2xz7851nfh57s1gy5bv9lgdgz"; }; # # We only need the header files. The library files are @@ -25,4 +25,3 @@ stdenv.mkDerivation { platforms = platforms.all; }; } - diff --git a/third_party/nixpkgs/pkgs/development/libraries/olm/default.nix b/third_party/nixpkgs/pkgs/development/libraries/olm/default.nix index ca3a081aee..e7642e16c9 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/olm/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/olm/default.nix @@ -2,14 +2,14 @@ stdenv.mkDerivation rec { pname = "olm"; - version = "3.2.2"; + version = "3.2.4"; src = fetchFromGitLab { domain = "gitlab.matrix.org"; owner = "matrix-org"; repo = pname; rev = version; - sha256 = "0qji25wiwmkxyfpraxj96c54hyayqmjkvwh0gsy5gb5pz5bp4mcy"; + sha256 = "1rl7j26li1irb1lqnnkzan7jrj38kvmdn69rlwbbp390v3z15lvh"; }; nativeBuildInputs = [ cmake ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/openal-soft/default.nix b/third_party/nixpkgs/pkgs/development/libraries/openal-soft/default.nix index 43c781cf52..2d469a406d 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/openal-soft/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/openal-soft/default.nix @@ -1,12 +1,12 @@ { lib, stdenv, fetchFromGitHub, cmake -, alsaSupport ? !stdenv.isDarwin, alsaLib ? null +, alsaSupport ? !stdenv.isDarwin, alsa-lib ? null , pulseSupport ? !stdenv.isDarwin, libpulseaudio ? null , CoreServices, AudioUnit, AudioToolbox }: with lib; -assert alsaSupport -> alsaLib != null; +assert alsaSupport -> alsa-lib != null; assert pulseSupport -> libpulseaudio != null; stdenv.mkDerivation rec { @@ -31,7 +31,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; buildInputs = [] - ++ optional alsaSupport alsaLib + ++ optional alsaSupport alsa-lib ++ optional pulseSupport libpulseaudio ++ optionals stdenv.isDarwin [ CoreServices AudioUnit AudioToolbox ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/opencolorio/1.x.nix b/third_party/nixpkgs/pkgs/development/libraries/opencolorio/1.x.nix new file mode 100644 index 0000000000..041ddf8e83 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/opencolorio/1.x.nix @@ -0,0 +1,45 @@ +{ stdenv, lib, fetchFromGitHub, cmake, boost, pkg-config, lcms2, tinyxml, git }: + +stdenv.mkDerivation rec { + pname = "opencolorio"; + version = "1.1.1"; + + src = fetchFromGitHub { + owner = "imageworks"; + repo = "OpenColorIO"; + rev = "v${version}"; + sha256 = "12srvxca51czpfjl0gabpidj9n84mw78ivxy5w75qhq2mmc798sb"; + }; + + outputs = [ "bin" "out" "dev" ]; + + # TODO: Investigate whether git can be dropped: It's only used to apply patches + nativeBuildInputs = [ cmake pkg-config git ]; + + buildInputs = [ lcms2 tinyxml ] ++ lib.optional stdenv.isDarwin boost; + + postPatch = '' + substituteInPlace src/core/CMakeLists.txt --replace "-Werror" "" + substituteInPlace src/pyglue/CMakeLists.txt --replace "-Werror" "" + ''; + + cmakeFlags = [ + "-DUSE_EXTERNAL_LCMS=ON" + "-DUSE_EXTERNAL_TINYXML=ON" + # External libyamlcpp 0.6.* not compatible: https://github.com/imageworks/OpenColorIO/issues/517 + "-DUSE_EXTERNAL_YAML=OFF" + ] ++ lib.optional stdenv.isDarwin "-DOCIO_USE_BOOST_PTR=ON" + ++ lib.optional (!stdenv.hostPlatform.isi686 && !stdenv.hostPlatform.isx86_64) "-DOCIO_USE_SSE=OFF"; + + postInstall = '' + mkdir -p $bin/bin; mv $out/bin $bin/ + ''; + + meta = with lib; { + homepage = "https://opencolorio.org"; + description = "A color management framework for visual effects and animation"; + license = licenses.bsd3; + maintainers = [ maintainers.goibhniu ]; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/opencolorio/default.nix b/third_party/nixpkgs/pkgs/development/libraries/opencolorio/default.nix index 8908f48661..522c8cfa4a 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/opencolorio/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/opencolorio/default.nix @@ -1,47 +1,49 @@ -{ stdenv, lib, fetchFromGitHub, cmake, boost, pkg-config, lcms2, tinyxml, git }: +{ + stdenv, lib, fetchFromGitHub, + cmake, expat, libyamlcpp, ilmbase, pystring, # Base dependencies + + glew, freeglut, # Only required on Linux + Carbon, GLUT, Cocoa, # Only required on Darwin + + pythonBindings ? true, # Python bindings + python3Packages, + + buildApps ? true, # Utility applications + lcms2, openimageio2, openexr, +}: with lib; stdenv.mkDerivation rec { pname = "opencolorio"; - version = "1.1.1"; + version = "2.0.1"; src = fetchFromGitHub { - owner = "imageworks"; + owner = "AcademySoftwareFoundation"; repo = "OpenColorIO"; rev = "v${version}"; - sha256 = "12srvxca51czpfjl0gabpidj9n84mw78ivxy5w75qhq2mmc798sb"; + sha256 = "194j9jp5c8ws0fryiz936wyinphnpzwpqnzvw9ryx6rbiwrba487"; }; - outputs = [ "bin" "out" "dev" ]; + nativeBuildInputs = [ cmake ]; + buildInputs = [ expat libyamlcpp ilmbase pystring ] + ++ lib.optionals stdenv.hostPlatform.isLinux [ glew freeglut ] + ++ lib.optionals stdenv.hostPlatform.isDarwin [ Carbon GLUT Cocoa ] + ++ lib.optionals pythonBindings [ python3Packages.python python3Packages.pybind11 ] + ++ lib.optionals buildApps [ lcms2 openimageio2 openexr ]; - # TODO: Investigate whether git can be dropped: It's only used to apply patches - nativeBuildInputs = [ cmake pkg-config git ]; + cmakeFlags = [ "-DOCIO_INSTALL_EXT_PACKAGES=NONE" ] + ++ lib.optional (!pythonBindings) "-DOCIO_BUILD_PYTHON=OFF" + ++ lib.optional (!buildApps) "-DOCIO_BUILD_APPS=OFF"; - buildInputs = [ lcms2 tinyxml ] ++ optional stdenv.isDarwin boost; - - postPatch = '' - substituteInPlace src/core/CMakeLists.txt --replace "-Werror" "" - substituteInPlace src/pyglue/CMakeLists.txt --replace "-Werror" "" - ''; - - cmakeFlags = [ - "-DUSE_EXTERNAL_LCMS=ON" - "-DUSE_EXTERNAL_TINYXML=ON" - # External libyamlcpp 0.6.* not compatible: https://github.com/imageworks/OpenColorIO/issues/517 - "-DUSE_EXTERNAL_YAML=OFF" - ] ++ optional stdenv.isDarwin "-DOCIO_USE_BOOST_PTR=ON" - ++ optional (!stdenv.hostPlatform.isi686 && !stdenv.hostPlatform.isx86_64) "-DOCIO_USE_SSE=OFF"; - - postInstall = '' - mkdir -p $bin/bin; mv $out/bin $bin/ - ''; + # TODO Investigate this: Python and GPU tests fail to load libOpenColorIO.so.2.0 + # doCheck = true; meta = with lib; { homepage = "https://opencolorio.org"; description = "A color management framework for visual effects and animation"; license = licenses.bsd3; - maintainers = [ maintainers.goibhniu ]; + maintainers = [ maintainers.rytone ]; platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/opencv/4.x.nix b/third_party/nixpkgs/pkgs/development/libraries/opencv/4.x.nix index 58609a9186..a33eff4faa 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/opencv/4.x.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/opencv/4.x.nix @@ -301,7 +301,7 @@ stdenv.mkDerivation { "-DCUDA_FAST_MATH=ON" "-DCUDA_HOST_COMPILER=${cudatoolkit.cc}/bin/cc" "-DCUDA_NVCC_FLAGS=--expt-relaxed-constexpr" - "-DNVIDIA_OPTICAL_FLOW_1_0_HEADERS_PATH=${nvidia-optical-flow-sdk}" + "-DNVIDIA_OPTICAL_FLOW_2_0_HEADERS_PATH=${nvidia-optical-flow-sdk}" ] ++ lib.optionals stdenv.isDarwin [ "-DWITH_OPENCL=OFF" "-DWITH_LAPACK=OFF" diff --git a/third_party/nixpkgs/pkgs/development/libraries/opencv/cuda_opt_flow.patch b/third_party/nixpkgs/pkgs/development/libraries/opencv/cuda_opt_flow.patch index cb96721fb5..2f97abd51b 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/opencv/cuda_opt_flow.patch +++ b/third_party/nixpkgs/pkgs/development/libraries/opencv/cuda_opt_flow.patch @@ -1,26 +1,27 @@ -diff --git a/opencv_contrib/cudaoptflow/CMakeLists.txt b/opencv_contrib/cudaoptflow/CMakeLists.txt -index e5b823ab4a..a728060d0b 100644 ---- a/opencv_contrib/cudaoptflow/CMakeLists.txt -+++ b/opencv_contrib/cudaoptflow/CMakeLists.txt -@@ -11,18 +11,6 @@ ocv_define_module(cudaoptflow opencv_video opencv_optflow opencv_cudaarithm open - set(NVIDIA_OPTICAL_FLOW_1_0_HEADERS_COMMIT "79c6cee80a2df9a196f20afd6b598a9810964c32") - set(NVIDIA_OPTICAL_FLOW_1_0_HEADERS_MD5 "ca5acedee6cb45d0ec610a6732de5c15") - set(NVIDIA_OPTICAL_FLOW_1_0_HEADERS_PATH "${OpenCV_BINARY_DIR}/3rdparty/NVIDIAOpticalFlowSDK_1_0_Headers") --ocv_download(FILENAME "${NVIDIA_OPTICAL_FLOW_1_0_HEADERS_COMMIT}.zip" -- HASH ${NVIDIA_OPTICAL_FLOW_1_0_HEADERS_MD5} -- URL -- "https://github.com/NVIDIA/NVIDIAOpticalFlowSDK/archive/" -- DESTINATION_DIR "${NVIDIA_OPTICAL_FLOW_1_0_HEADERS_PATH}" -- STATUS NVIDIA_OPTICAL_FLOW_1_0_HEADERS_DOWNLOAD_SUCCESS -- ID "NVIDIA_OPTICAL_FLOW" -- UNPACK RELATIVE_URL) - --if(NOT NVIDIA_OPTICAL_FLOW_1_0_HEADERS_DOWNLOAD_SUCCESS) -- message(STATUS "Failed to download NVIDIA_Optical_Flow_1_0 Headers") --else() -- add_definitions(-DHAVE_NVIDIA_OPTFLOW=1) -- ocv_include_directories(SYSTEM "${NVIDIA_OPTICAL_FLOW_1_0_HEADERS_PATH}/NVIDIAOpticalFlowSDK-${NVIDIA_OPTICAL_FLOW_1_0_HEADERS_COMMIT}") +diff --unified --recursive --text a/opencv_contrib/cudaoptflow/CMakeLists.txt b/opencv_contrib/cudaoptflow/CMakeLists.txt +--- a/opencv_contrib/cudaoptflow/CMakeLists.txt 2021-06-12 01:35:47.536395972 +0300 ++++ b/opencv_contrib/cudaoptflow/CMakeLists.txt 2021-06-12 01:36:02.029498597 +0300 +@@ -12,19 +12,6 @@ + set(NVIDIA_OPTICAL_FLOW_2_0_HEADERS_COMMIT "edb50da3cf849840d680249aa6dbef248ebce2ca") + set(NVIDIA_OPTICAL_FLOW_2_0_HEADERS_MD5 "a73cd48b18dcc0cc8933b30796074191") + set(NVIDIA_OPTICAL_FLOW_2_0_HEADERS_PATH "${OpenCV_BINARY_DIR}/3rdparty/NVIDIAOpticalFlowSDK_2_0_Headers") +- ocv_download(FILENAME "${NVIDIA_OPTICAL_FLOW_2_0_HEADERS_COMMIT}.zip" +- HASH ${NVIDIA_OPTICAL_FLOW_2_0_HEADERS_MD5} +- URL "https://github.com/NVIDIA/NVIDIAOpticalFlowSDK/archive/" +- DESTINATION_DIR "${NVIDIA_OPTICAL_FLOW_2_0_HEADERS_PATH}" +- STATUS NVIDIA_OPTICAL_FLOW_2_0_HEADERS_DOWNLOAD_SUCCESS +- ID "NVIDIA_OPTICAL_FLOW" +- UNPACK RELATIVE_URL) +- +- if(NOT NVIDIA_OPTICAL_FLOW_2_0_HEADERS_DOWNLOAD_SUCCESS) +- message(STATUS "Failed to download NVIDIA_Optical_Flow_2_0 Headers") +- else() +- message(STATUS "Building with NVIDIA Optical Flow API 2.0") +- add_definitions(-DHAVE_NVIDIA_OPTFLOW=2) +- ocv_include_directories(SYSTEM "${NVIDIA_OPTICAL_FLOW_2_0_HEADERS_PATH}/NVIDIAOpticalFlowSDK-${NVIDIA_OPTICAL_FLOW_2_0_HEADERS_COMMIT}") +- endif() -endif() \ No newline at end of file -+add_definitions(-DHAVE_NVIDIA_OPTFLOW=1) -+ocv_include_directories(SYSTEM "${NVIDIA_OPTICAL_FLOW_1_0_HEADERS_PATH}") ++ add_definitions(-DHAVE_NVIDIA_OPTFLOW=2) ++ ocv_include_directories(SYSTEM "${NVIDIA_OPTICAL_FLOW_2_0_HEADERS_PATH}") ++endif() diff --git a/third_party/nixpkgs/pkgs/development/libraries/openimagedenoise/default.nix b/third_party/nixpkgs/pkgs/development/libraries/openimagedenoise/default.nix index 61ffdcbb5c..6547c321db 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/openimagedenoise/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/openimagedenoise/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { pname = "openimagedenoise"; - version = "1.3.0"; + version = "1.4.0"; # The release tarballs include pretrained weights, which would otherwise need to be fetched with git-lfs src = fetchzip { url = "https://github.com/OpenImageDenoise/oidn/releases/download/v${version}/oidn-${version}.src.tar.gz"; - sha256 = "sha256-ls0F2D5pC+wqhQn1Zh8m8Q/KoK7rAkhKatTY9k+letQ="; + sha256 = "sha256-UsiZT3ufRVo1BQ/md/A3CXpUfMPrJR1DhZg9hrjOG2A="; }; nativeBuildInputs = [ cmake python3 ispc ]; @@ -19,5 +19,6 @@ stdenv.mkDerivation rec { license = licenses.asl20; maintainers = [ maintainers.leshainc ]; platforms = platforms.unix; + changelog = "https://github.com/OpenImageDenoise/oidn/blob/v${version}/CHANGELOG.md"; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/openssl/default.nix b/third_party/nixpkgs/pkgs/development/libraries/openssl/default.nix index 2a586f9e9e..d4be8cc242 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/openssl/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/openssl/default.nix @@ -54,7 +54,10 @@ let outputs = [ "bin" "dev" "out" "man" ] ++ optional withDocs "doc"; setOutputFlags = false; - separateDebugInfo = !(stdenv.hostPlatform.useLLVM or false) && stdenv.cc.isGNU; + separateDebugInfo = + !stdenv.hostPlatform.isDarwin && + !(stdenv.hostPlatform.useLLVM or false) && + stdenv.cc.isGNU; nativeBuildInputs = [ perl ]; buildInputs = lib.optional withCryptodev cryptodev @@ -93,6 +96,8 @@ let throw "Not sure what configuration to use for ${stdenv.hostPlatform.config}" ); + # OpenSSL doesn't like the `--enable-static` / `--disable-shared` flags. + dontAddStaticConfigureFlags = true; configureFlags = [ "shared" # "shared" builds both shared and static libraries "--libdir=lib" diff --git a/third_party/nixpkgs/pkgs/development/libraries/orocos-kdl/default.nix b/third_party/nixpkgs/pkgs/development/libraries/orocos-kdl/default.nix index 094ee54464..032b67e683 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/orocos-kdl/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/orocos-kdl/default.nix @@ -2,13 +2,15 @@ stdenv.mkDerivation rec { pname = "orocos-kdl"; - version = "1.4.0"; + version = "1.5.0"; src = fetchFromGitHub { owner = "orocos"; repo = "orocos_kinematics_dynamics"; rev = "v${version}"; - sha256 = "0qj56j231h0rnjbglakammxn2lwmhy5f2qa37v1f6pcn81dn13vv"; + sha256 = "181w2q6lsrfcvrgqwi6m0xrydjlblj1b654apf2d7zjc7qqgd6ca"; + # Needed to build Python bindings + fetchSubmodules = true; }; sourceRoot = "source/orocos_kdl"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/pcaudiolib/default.nix b/third_party/nixpkgs/pkgs/development/libraries/pcaudiolib/default.nix index ebdacdfc9b..2c7dd440da 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/pcaudiolib/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/pcaudiolib/default.nix @@ -1,6 +1,6 @@ { config, stdenv, lib, fetchFromGitHub , autoconf, automake, which, libtool, pkg-config -, portaudio, alsaLib +, portaudio, alsa-lib , pulseaudioSupport ? config.pulseaudio or stdenv.isLinux, libpulseaudio }: stdenv.mkDerivation rec { @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoconf automake which libtool pkg-config ]; buildInputs = [ portaudio ] - ++ lib.optionals stdenv.isLinux [ alsaLib ] + ++ lib.optionals stdenv.isLinux [ alsa-lib ] ++ lib.optionals pulseaudioSupport [ libpulseaudio ]; preConfigure = "./autogen.sh"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/physics/lhapdf/default.nix b/third_party/nixpkgs/pkgs/development/libraries/physics/lhapdf/default.nix index 19e9f9d9ec..143f72541b 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/physics/lhapdf/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/physics/lhapdf/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, python2, makeWrapper }: +{ lib, stdenv, fetchurl, python, makeWrapper }: stdenv.mkDerivation rec { pname = "lhapdf"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ makeWrapper ]; - buildInputs = [ python2 ]; + buildInputs = [ python ]; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/development/libraries/pico-sdk/default.nix b/third_party/nixpkgs/pkgs/development/libraries/pico-sdk/default.nix new file mode 100644 index 0000000000..3db4ff336f --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/pico-sdk/default.nix @@ -0,0 +1,35 @@ +{ lib, stdenv, fetchFromGitHub, cmake }: + +stdenv.mkDerivation rec { + pname = "pico-sdk"; + version = "1.2.0"; + + src = fetchFromGitHub { + owner = "raspberrypi"; + repo = pname; + rev = version; + sha256 = "00z160f7ypws5pzp1ql7xrs3gmjcbw6gywnnq2fiwl47940balns"; + }; + + nativeBuildInputs = [ cmake ]; + + # SDK contains libraries and build-system to develop projects for RP2040 chip + # We only need to compile pioasm binary + sourceRoot = "source/tools/pioasm"; + + installPhase = '' + runHook preInstall + mkdir -p $out/lib/pico-sdk + cp -a ../../../* $out/lib/pico-sdk/ + chmod 755 $out/lib/pico-sdk/tools/pioasm/build/pioasm + runHook postInstall + ''; + + meta = with lib; { + homepage = "https://github.com/raspberrypi/picotool"; + description = "SDK provides the headers, libraries and build system necessary to write programs for the RP2040-based devices"; + license = licenses.bsd3; + maintainers = with maintainers; [ musfay ]; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/pipewire/0.2.nix b/third_party/nixpkgs/pkgs/development/libraries/pipewire/0.2.nix index 1e686b9800..276ad6b8c4 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/pipewire/0.2.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/pipewire/0.2.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, meson, ninja, pkg-config, doxygen, graphviz, valgrind -, glib, dbus, gst_all_1, alsaLib, ffmpeg_4, libjack2, udev, libva, xorg +, glib, dbus, gst_all_1, alsa-lib, ffmpeg_4, libjack2, udev, libva, xorg , sbc, SDL2, makeFontsConf }: @@ -25,7 +25,7 @@ in stdenv.mkDerivation rec { ]; buildInputs = [ glib dbus gst_all_1.gst-plugins-base gst_all_1.gstreamer - alsaLib ffmpeg_4 libjack2 udev libva xorg.libX11 sbc SDL2 + alsa-lib ffmpeg_4 libjack2 udev libva xorg.libX11 sbc SDL2 ]; mesonFlags = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/pipewire/0080-pipewire-config-dir.patch b/third_party/nixpkgs/pkgs/development/libraries/pipewire/0080-pipewire-config-dir.patch index b92e2818ea..b8d8fcb0f9 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/pipewire/0080-pipewire-config-dir.patch +++ b/third_party/nixpkgs/pkgs/development/libraries/pipewire/0080-pipewire-config-dir.patch @@ -1,30 +1,30 @@ diff --git a/meson.build b/meson.build -index a27569bd..fcf18344 100644 +index b6b4553b..f21c29d8 100644 --- a/meson.build +++ b/meson.build -@@ -36,7 +36,10 @@ pipewire_libexecdir = prefix / get_option('libexecdir') - pipewire_localedir = prefix / get_option('localedir') +@@ -37,7 +37,10 @@ pipewire_localedir = prefix / get_option('localedir') pipewire_sysconfdir = prefix / get_option('sysconfdir') --pipewire_configdir = pipewire_sysconfdir / 'pipewire' -+pipewire_configdir = get_option('pipewire_config_dir') -+if pipewire_configdir == '' -+ pipewire_configdir = pipewire_sysconfdir / 'pipewire' + pipewire_configdir = pipewire_sysconfdir / 'pipewire' +-pipewire_confdatadir = pipewire_datadir / 'pipewire' ++pipewire_confdatadir = get_option('pipewire_confdata_dir') ++if pipewire_confdatadir == '' ++ pipewire_confdatadir = pipewire_datadir / 'pipewire' +endif modules_install_dir = pipewire_libdir / pipewire_name if host_machine.system() == 'linux' diff --git a/meson_options.txt b/meson_options.txt -index 85beb86a..372e8faa 100644 +index 9bc33fcd..e4bd2dc1 100644 --- a/meson_options.txt +++ b/meson_options.txt -@@ -67,6 +67,9 @@ option('jack-devel', +@@ -61,6 +61,9 @@ option('jack-devel', option('libjack-path', description: 'Where to install the libjack.so library', type: 'string') -+option('pipewire_config_dir', -+ type : 'string', -+ description : 'Directory for pipewire configuration (defaults to /etc/pipewire)') ++option('pipewire_confdata_dir', ++ type: 'string', ++ description: 'Directory for pipewire default configuration (defaults to /usr/share/pipewire)') option('spa-plugins', description: 'Enable spa plugins integration', type: 'feature', diff --git a/third_party/nixpkgs/pkgs/development/libraries/pipewire/0090-pipewire-config-template-paths.patch b/third_party/nixpkgs/pkgs/development/libraries/pipewire/0090-pipewire-config-template-paths.patch new file mode 100644 index 0000000000..966cb95797 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/pipewire/0090-pipewire-config-template-paths.patch @@ -0,0 +1,28 @@ +diff --git a/src/daemon/pipewire.conf.in b/src/daemon/pipewire.conf.in +index bbafa134..227d3e06 100644 +--- a/src/daemon/pipewire.conf.in ++++ b/src/daemon/pipewire.conf.in +@@ -116,7 +116,7 @@ context.modules = [ + # access.allowed to list an array of paths of allowed + # apps. + #access.allowed = [ +- # @media_session_path@ ++ # + #] + + # An array of rejected paths. +@@ -220,12 +220,12 @@ context.exec = [ + # but it is better to start it as a systemd service. + # Run the session manager with -h for options. + # +- @comment@{ path = "@media_session_path@" args = "" } ++ @comment@{ path = "" args = "" } + # + # You can optionally start the pulseaudio-server here as well + # but it is better to start it as a systemd service. + # It can be interesting to start another daemon here that listens + # on another address with the -a option (eg. -a tcp:4713). + # +- @comment@{ path = "@pipewire_path@" args = "-c pipewire-pulse.conf" } ++ @comment@{ path = "" args = "-c pipewire-pulse.conf" } + ] diff --git a/third_party/nixpkgs/pkgs/development/libraries/pipewire/default.nix b/third_party/nixpkgs/pkgs/development/libraries/pipewire/default.nix index b3e740f39c..8504d26698 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/pipewire/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/pipewire/default.nix @@ -2,6 +2,7 @@ , lib , fetchFromGitLab , removeReferencesTo +, python3 , meson , ninja , systemd @@ -11,7 +12,7 @@ , valgrind , glib , dbus -, alsaLib +, alsa-lib , libjack2 , udev , libva @@ -19,6 +20,7 @@ , SDL2 , vulkan-headers , vulkan-loader +, webrtc-audio-processing , ncurses , makeFontsConf , callPackage @@ -31,6 +33,8 @@ , nativeHfpSupport ? true , ofonoSupport ? true , hsphfpdSupport ? true +, pulseTunnelSupport ? true, libpulseaudio ? null +, zeroconfSupport ? true, avahi ? null }: let @@ -42,7 +46,7 @@ let self = stdenv.mkDerivation rec { pname = "pipewire"; - version = "0.3.27"; + version = "0.3.30"; outputs = [ "out" @@ -60,7 +64,7 @@ let owner = "pipewire"; repo = "pipewire"; rev = version; - sha256 = "sha256-GfcMODQWtcahBvXnZ98/PKIm4pkqLaz09oOy7zQR4IA="; + sha256 = "sha256-DnaPvZoDaegjtJNKBmCJEAZe5FQBnSER79FPnxiWQUE="; }; patches = [ @@ -72,8 +76,10 @@ let ./0055-pipewire-media-session-path.patch # Move installed tests into their own output. ./0070-installed-tests-path.patch - # Add flag to specify configuration directory (different from the installation directory). + # Add option for changing the config install directory ./0080-pipewire-config-dir.patch + # Remove output paths from the comments in the config templates to break dependency cycles + ./0090-pipewire-config-template-paths.patch ]; nativeBuildInputs = [ @@ -82,10 +88,11 @@ let meson ninja pkg-config + python3 ]; buildInputs = [ - alsaLib + alsa-lib dbus glib libjack2 @@ -94,12 +101,15 @@ let udev vulkan-headers vulkan-loader + webrtc-audio-processing valgrind SDL2 systemd ] ++ lib.optionals gstreamerSupport [ gst_all_1.gst-plugins-base gst_all_1.gstreamer ] ++ lib.optional ffmpegSupport ffmpeg - ++ lib.optionals bluezSupport [ bluez libopenaptx ldacbt sbc fdk_aac ]; + ++ lib.optionals bluezSupport [ bluez libopenaptx ldacbt sbc fdk_aac ] + ++ lib.optional pulseTunnelSupport libpulseaudio + ++ lib.optional zeroconfSupport avahi; mesonFlags = [ "-Ddocs=enabled" @@ -112,6 +122,8 @@ let "-Dmedia-session-prefix=${placeholder "mediaSession"}" "-Dlibjack-path=${placeholder "jack"}/lib" "-Dlibcamera=disabled" + "-Dlibpulse=${mesonEnable pulseTunnelSupport}" + "-Davahi=${mesonEnable zeroconfSupport}" "-Dgstreamer=${mesonEnable gstreamerSupport}" "-Dffmpeg=${mesonEnable ffmpegSupport}" "-Dbluez5=${mesonEnable bluezSupport}" @@ -119,24 +131,35 @@ let "-Dbluez5-backend-hfp-native=${mesonEnable nativeHfpSupport}" "-Dbluez5-backend-ofono=${mesonEnable ofonoSupport}" "-Dbluez5-backend-hsphfpd=${mesonEnable hsphfpdSupport}" - "-Dpipewire_config_dir=/etc/pipewire" + "-Dsysconfdir=/etc" + "-Dpipewire_confdata_dir=${placeholder "lib"}/share/pipewire" ]; FONTCONFIG_FILE = fontsConf; # Fontconfig error: Cannot load default config file doCheck = true; + postUnpack = '' + patchShebangs source/doc/strip-static.sh + patchShebangs source/spa/tests/gen-cpp-test.py + ''; + postInstall = '' - pushd . - cd $out + pushd $lib/share mkdir -p $out/nix-support/etc/pipewire - for f in etc/pipewire/*.conf; do bin/spa-json-dump "$f" > "$out/nix-support/$f.json"; done + for f in pipewire/*.conf; do + echo "Generating JSON from $f" + $out/bin/spa-json-dump "$f" > "$out/nix-support/etc/$f.json" + done mkdir -p $mediaSession/nix-support/etc/pipewire/media-session.d - for f in etc/pipewire/media-session.d/*.conf; do bin/spa-json-dump "$f" > "$mediaSession/nix-support/$f.json"; done + for f in pipewire/media-session.d/*.conf; do + echo "Generating JSON from $f" + $out/bin/spa-json-dump "$f" > "$mediaSession/nix-support/etc/$f.json" + done popd - moveToOutput "etc/pipewire/media-session.d/*.conf" "$mediaSession" + moveToOutput "share/pipewire/media-session.d/*.conf" "$mediaSession" moveToOutput "share/systemd/user/pipewire-media-session.*" "$mediaSession" moveToOutput "lib/systemd/user/pipewire-media-session.*" "$mediaSession" moveToOutput "bin/pipewire-media-session" "$mediaSession" @@ -155,6 +178,7 @@ let test-paths = callPackage ./test-paths.nix { paths-out = [ "share/alsa/alsa.conf.d/50-pipewire.conf" + "nix-support/etc/pipewire/client-rt.conf.json" "nix-support/etc/pipewire/client.conf.json" "nix-support/etc/pipewire/jack.conf.json" "nix-support/etc/pipewire/pipewire.conf.json" diff --git a/third_party/nixpkgs/pkgs/development/libraries/poppler/0.61.nix b/third_party/nixpkgs/pkgs/development/libraries/poppler/0.61.nix index 9b89283972..e46da53f68 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/poppler/0.61.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/poppler/0.61.nix @@ -1,5 +1,20 @@ -{ stdenv, lib, fetchurl, cmake, ninja, pkg-config, libiconv, libintl -, zlib, curl, cairo, freetype, fontconfig, lcms, libjpeg, openjpeg, fetchpatch +{ stdenv +, lib +, fetchurl +, fetchpatch +, cairo +, cmake +, curl +, fontconfig +, freetype +, lcms +, libiconv +, libintl +, libjpeg +, ninja +, openjpeg +, pkg-config +, zlib , withData ? true, poppler_data , qt5Support ? false, qtbase ? null , introspectionSupport ? false, gobject-introspection ? null @@ -12,25 +27,38 @@ let mkFlag = optset: flag: "-DENABLE_${flag}=${if optset then "on" else "off"}"; in stdenv.mkDerivation rec { - name = "poppler-${suffix}-${version}"; + pname = "poppler-${suffix}"; + inherit version; src = fetchurl { - url = "${meta.homepage}/poppler-${version}.tar.xz"; + url = "https://poppler.freedesktop.org/poppler-${version}.tar.xz"; sha256 = "1afdrxxkaivvviazxkg5blsf2x24sjkfj92ib0d3q5pm8dihjrhj"; }; outputs = [ "out" "dev" ]; patches = [ + # Fix internal crash: a negative number that should not be (fetchpatch { name = "CVE-2018-13988"; url = "https://cgit.freedesktop.org/poppler/poppler/patch/?id=004e3c10df0abda214f0c293f9e269fdd979c5ee"; sha256 = "1l8713s57xc6g81bldw934rsfm140fqc7ggd50ha5mxdl1b3app2"; }) + # Fix internal crash: a negative number that should not be (not the above!) ./0.61-CVE-2019-9959.patch ]; - buildInputs = [ libiconv libintl ] ++ lib.optional withData poppler_data; + nativeBuildInputs = [ + cmake + ninja + pkg-config + ]; + + buildInputs = [ + libiconv + libintl + ] + ++ lib.optional withData poppler_data; # TODO: reduce propagation to necessary libs propagatedBuildInputs = with lib; @@ -39,8 +67,6 @@ stdenv.mkDerivation rec { ++ optional qt5Support qtbase ++ optional introspectionSupport gobject-introspection; - nativeBuildInputs = [ cmake ninja pkg-config ]; - # Not sure when and how to pass it. It seems an upstream bug anyway. CXXFLAGS = lib.optionalString stdenv.cc.isClang "-std=c++11"; @@ -58,12 +84,10 @@ stdenv.mkDerivation rec { meta = with lib; { homepage = "https://poppler.freedesktop.org/"; description = "A PDF rendering library"; - longDescription = '' Poppler is a PDF rendering library based on the xpdf-3.0 code base. ''; - - license = licenses.gpl2; + license = licenses.gpl2Plus; platforms = platforms.all; maintainers = with maintainers; [ ttuegel ]; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/poppler/default.nix b/third_party/nixpkgs/pkgs/development/libraries/poppler/default.nix index 8a5c6e132a..08ca1456ea 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/poppler/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/poppler/default.nix @@ -1,44 +1,46 @@ -{ stdenv -, lib +{ lib +, stdenv , fetchurl , fetchpatch +, cairo , cmake -, ninja -, pkg-config +, pcre +, boost +, cups-filters +, curl +, fontconfig +, freetype +, inkscape +, lcms , libiconv , libintl -, zlib -, curl -, cairo -, freetype -, fontconfig -, lcms , libjpeg +, ninja , openjpeg +, pkg-config +, scribusUnstable +, texlive +, zlib , withData ? true, poppler_data , qt5Support ? false, qtbase ? null , introspectionSupport ? false, gobject-introspection ? null , utils ? false, nss ? null , minimal ? false , suffix ? "glib" -, inkscape -, cups-filters -, texlive -, scribusUnstable }: let mkFlag = optset: flag: "-DENABLE_${flag}=${if optset then "on" else "off"}"; in stdenv.mkDerivation rec { - name = "poppler-${suffix}-${version}"; - version = "21.05.0"; # beware: updates often break cups-filters build, check texlive and scribusUnstable too! + pname = "poppler-${suffix}"; + version = "21.06.1"; # beware: updates often break cups-filters build, check texlive and scribusUnstable too! outputs = [ "out" "dev" ]; src = fetchurl { - url = "${meta.homepage}/poppler-${version}.tar.xz"; - sha256 = "sha256-2v1Te2gPrRIVvED8U9HzjoRJ18GFvGDVqJ4dJskNvYw="; + url = "https://poppler.freedesktop.org/poppler-${version}.tar.xz"; + sha256 = "sha256-hrCeWgLeQAgaORbvhxHFEo6vSx/FnV+H0Oxm8E9ZXbQ="; }; nativeBuildInputs = [ @@ -48,6 +50,8 @@ stdenv.mkDerivation rec { ]; buildInputs = [ + boost + pcre libiconv libintl ] ++ lib.optional withData [ @@ -98,13 +102,10 @@ stdenv.mkDerivation rec { meta = with lib; { homepage = "https://poppler.freedesktop.org/"; description = "A PDF rendering library"; - longDescription = '' - Poppler is a PDF rendering library based on the xpdf-3.0 code - base. In addition it provides a number of tools that can be - installed separately. + Poppler is a PDF rendering library based on the xpdf-3.0 code base. In + addition it provides a number of tools that can be installed separately. ''; - license = licenses.gpl2Plus; platforms = platforms.all; maintainers = with maintainers; [ ttuegel ] ++ teams.freedesktop.members; diff --git a/third_party/nixpkgs/pkgs/development/libraries/popt/default.nix b/third_party/nixpkgs/pkgs/development/libraries/popt/default.nix index 92c143f241..307408e4db 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/popt/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/popt/default.nix @@ -1,11 +1,11 @@ -{lib, stdenv, fetchurl}: +{ lib, stdenv, fetchurl }: stdenv.mkDerivation rec { pname = "popt"; version = "1.18"; src = fetchurl { - url = "mirror://debian/pool/main/p/popt/popt_${version}.orig.tar.gz"; + url = "https://ftp.osuosl.org/pub/rpm/popt/releases/popt-1.x/popt-${version}.tar.gz"; sha256 = "1lf5zlj5rbg6s4bww7hbhpca97prgprnarx978vcwa0bl81vqnai"; }; @@ -17,8 +17,10 @@ stdenv.mkDerivation rec { doCheck = false; # fails meta = with lib; { + homepage = "https://github.com/rpm-software-management/popt"; description = "Command line option parsing library"; - platforms = platforms.unix; + maintainers = with maintainers; [ qyliss ]; license = licenses.mit; + platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/portaudio/default.nix b/third_party/nixpkgs/pkgs/development/libraries/portaudio/default.nix index c7de116e87..efa68146e8 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/portaudio/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/portaudio/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, pkg-config, libjack2 +{ lib, stdenv, fetchurl, alsa-lib, pkg-config, libjack2 , AudioUnit, AudioToolbox, CoreAudio, CoreServices, Carbon }: stdenv.mkDerivation { @@ -11,7 +11,7 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkg-config ]; buildInputs = [ libjack2 ] - ++ lib.optional (!stdenv.isDarwin) alsaLib; + ++ lib.optional (!stdenv.isDarwin) alsa-lib; configureFlags = [ "--disable-mac-universal" "--enable-cxx" ]; @@ -32,7 +32,7 @@ stdenv.mkDerivation { make install '' + lib.optionalString (!stdenv.isDarwin) '' # fixup .pc file to find alsa library - sed -i "s|-lasound|-L${alsaLib.out}/lib -lasound|" "$out/lib/pkgconfig/"*.pc + sed -i "s|-lasound|-L${alsa-lib.out}/lib -lasound|" "$out/lib/pkgconfig/"*.pc '' + lib.optionalString stdenv.isDarwin '' cp include/pa_mac_core.h $out/include/pa_mac_core.h ''; diff --git a/third_party/nixpkgs/pkgs/development/libraries/portmidi/default.nix b/third_party/nixpkgs/pkgs/development/libraries/portmidi/default.nix index e9a868240b..0151d461c1 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/portmidi/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/portmidi/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, unzip, cmake, /*jdk,*/ alsaLib }: +{ lib, stdenv, fetchurl, unzip, cmake, /*jdk,*/ alsa-lib }: stdenv.mkDerivation rec { pname = "portmidi"; @@ -45,7 +45,7 @@ stdenv.mkDerivation rec { ''; nativeBuildInputs = [ unzip cmake ]; - buildInputs = [ alsaLib ]; + buildInputs = [ alsa-lib ]; hardeningDisable = [ "format" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/pystring/default.nix b/third_party/nixpkgs/pkgs/development/libraries/pystring/default.nix new file mode 100644 index 0000000000..3a1e64c0b0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/pystring/default.nix @@ -0,0 +1,33 @@ +{ stdenv, lib, fetchFromGitHub, fetchpatch, cmake }: + +stdenv.mkDerivation rec { + pname = "pystring"; + version = "1.1.3"; + + src = fetchFromGitHub { + owner = "imageworks"; + repo = "pystring"; + rev = "v${version}"; + sha256 = "1w31pjiyshqgk6zd6m3ab3xfgb0ribi77r6fwrry2aw8w1adjknf"; + }; + + patches = [ + (fetchpatch { + name = "pystring-cmake-configuration.patch"; + url = "https://github.com/imageworks/pystring/commit/4f653fc35421129eae8a2c424901ca7170059370.patch"; + sha256 = "1hynzz76ff4vvmi6kwixsmjswkpyj6s4vv05d7nw0zscj4cdp8k3"; + }) + ]; + + nativeBuildInputs = [ cmake ]; + + doCheck = true; + + meta = with lib; { + homepage = "https://github.com/imageworks/pystring/"; + description = "A collection of C++ functions which match the interface and behavior of python's string class methods using std::string"; + license = licenses.bsd3; + maintainers = [ maintainers.rytone ]; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/qt-4.x/4.8/default.nix b/third_party/nixpkgs/pkgs/development/libraries/qt-4.x/4.8/default.nix index 532a72c820..ed93d86a19 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/qt-4.x/4.8/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/qt-4.x/4.8/default.nix @@ -3,7 +3,7 @@ , libXfixes, libXrandr, libSM, freetype, fontconfig, zlib, libjpeg, libpng , libmng, which, libGLU, openssl, dbus, cups, pkg-config , libtiff, glib, icu, libmysqlclient, postgresql, sqlite, perl, coreutils, libXi -, alsaLib +, alsa-lib , libGLSupported ? lib.elem stdenv.hostPlatform.system lib.platforms.mesaPlatforms , gtkStyle ? stdenv.hostPlatform == stdenv.buildPlatform, gtk2, gdk-pixbuf , gnomeStyle ? false, libgnomeui, GConf, gnome_vfs diff --git a/third_party/nixpkgs/pkgs/development/libraries/qt-5/modules/qtmultimedia.nix b/third_party/nixpkgs/pkgs/development/libraries/qt-5/modules/qtmultimedia.nix index 0af773947f..0d2d565fe7 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/qt-5/modules/qtmultimedia.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/qt-5/modules/qtmultimedia.nix @@ -1,5 +1,5 @@ { qtModule, lib, stdenv, qtbase, qtdeclarative, pkg-config -, alsaLib, gstreamer, gst-plugins-base, libpulseaudio, wayland +, alsa-lib, gstreamer, gst-plugins-base, libpulseaudio, wayland }: with lib; @@ -9,7 +9,7 @@ qtModule { qtInputs = [ qtbase qtdeclarative ]; nativeBuildInputs = [ pkg-config ]; buildInputs = [ gstreamer gst-plugins-base libpulseaudio ] - ++ optional (stdenv.isLinux) alsaLib + ++ optional (stdenv.isLinux) alsa-lib ++ optional (versionAtLeast qtbase.version "5.14.0" && stdenv.isLinux) wayland; outputs = [ "bin" "dev" "out" ]; qmakeFlags = [ "GST_VERSION=1.0" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/qt-5/modules/qtwebengine.nix b/third_party/nixpkgs/pkgs/development/libraries/qt-5/modules/qtwebengine.nix index 13ab7e35c5..729c5f388f 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/qt-5/modules/qtwebengine.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/qt-5/modules/qtwebengine.nix @@ -8,7 +8,7 @@ , fontconfig, freetype, harfbuzz, icu, dbus, libdrm , zlib, minizip, libjpeg, libpng, libtiff, libwebp, libopus , jsoncpp, protobuf, libvpx, srtp, snappy, nss, libevent -, alsaLib +, alsa-lib , libcap , pciutils , systemd @@ -156,7 +156,7 @@ qtModule { dbus zlib minizip snappy nss protobuf jsoncpp # Audio formats - alsaLib + alsa-lib # Text rendering fontconfig freetype diff --git a/third_party/nixpkgs/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix b/third_party/nixpkgs/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix index c2fa32b6d0..80998e6ef1 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "qtstyleplugin-kvantum"; - version = "0.11.2"; + version = "0.20.0"; src = fetchFromGitHub { owner = "tsujan"; repo = "Kvantum"; rev = "V${version}"; - sha256 = "1jcfv96ws6sm3kc2q8zriwqhry24qbq3zbp8gkqw75wssbv82rmc"; + sha256 = "133m5ifs8ylhdh78m99n0y76q0nix68xsqfwcsrak4yr1n5pj9qp"; }; nativeBuildInputs = [ @@ -33,6 +33,7 @@ stdenv.mkDerivation rec { homepage = "https://github.com/tsujan/Kvantum"; license = licenses.gpl3; platforms = platforms.linux; + broken = lib.versionOlder qtbase.version "5.14"; maintainers = [ maintainers.bugworm ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/qxmpp/default.nix b/third_party/nixpkgs/pkgs/development/libraries/qxmpp/default.nix new file mode 100644 index 0000000000..4867c67277 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/qxmpp/default.nix @@ -0,0 +1,46 @@ +{ mkDerivation +, lib +, fetchFromGitHub +, cmake +, pkg-config +, withGstreamer ? true +, gst_all_1 +}: + +mkDerivation rec { + pname = "qxmpp"; + version = "1.4.0"; + + src = fetchFromGitHub { + owner = "qxmpp-project"; + repo = pname; + rev = "v${version}"; + sha256 = "1knpq1jkwk0lxdwczbmzf7qrjvlxba9yr40nbq9s5nqkcx6q1c3i"; + }; + + nativeBuildInputs = [ + cmake + ] ++ lib.optionals withGstreamer [ + pkg-config + ]; + buildInputs = lib.optionals withGstreamer (with gst_all_1; [ + gstreamer + gst-plugins-bad + gst-plugins-base + gst-plugins-good + ]); + cmakeFlags = [ + "-DBUILD_EXAMPLES=false" + "-DBUILD_TESTS=false" + ] ++ lib.optionals withGstreamer [ + "-DWITH_GSTREAMER=ON" + ]; + + meta = with lib; { + description = "Cross-platform C++ XMPP client and server library"; + homepage = "https://github.com/qxmpp-project/qxmpp"; + license = licenses.lgpl21Plus; + maintainers = with maintainers; [ astro ]; + platforms = with platforms; linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/raylib/default.nix b/third_party/nixpkgs/pkgs/development/libraries/raylib/default.nix index 16f6c324a7..836bafd428 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/raylib/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/raylib/default.nix @@ -1,7 +1,7 @@ { stdenv, lib, fetchFromGitHub, fetchpatch, cmake, mesa, libGLU, glfw, libX11, libXi, libXcursor, libXrandr, libXinerama, - alsaSupport ? stdenv.hostPlatform.isLinux, alsaLib, + alsaSupport ? stdenv.hostPlatform.isLinux, alsa-lib, pulseSupport ? stdenv.hostPlatform.isLinux, libpulseaudio, sharedLib ? true, includeEverything ? true @@ -29,7 +29,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; buildInputs = [ mesa libGLU glfw libX11 libXi libXcursor libXrandr libXinerama - ] ++ lib.optional alsaSupport alsaLib + ] ++ lib.optional alsaSupport alsa-lib ++ lib.optional pulseSupport libpulseaudio; # https://github.com/raysan5/raylib/wiki/CMake-Build-Options @@ -41,7 +41,7 @@ stdenv.mkDerivation rec { # fix libasound.so/libpulse.so not being found preFixup = '' - ${lib.optionalString alsaSupport "patchelf --add-needed ${alsaLib}/lib/libasound.so $out/lib/libraylib.so.${version}"} + ${lib.optionalString alsaSupport "patchelf --add-needed ${alsa-lib}/lib/libasound.so $out/lib/libraylib.so.${version}"} ${lib.optionalString pulseSupport "patchelf --add-needed ${libpulseaudio}/lib/libpulse.so $out/lib/libraylib.so.${version}"} ''; diff --git a/third_party/nixpkgs/pkgs/development/libraries/retro-gtk/default.nix b/third_party/nixpkgs/pkgs/development/libraries/retro-gtk/default.nix new file mode 100644 index 0000000000..3ab3ffcda0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/retro-gtk/default.nix @@ -0,0 +1,70 @@ +{ lib +, stdenv +, fetchurl +, cmake +, meson +, ninja +, pkg-config +, epoxy +, glib +, gtk3 +, libpulseaudio +, libsamplerate +, gobject-introspection +, vala +, gtk-doc +}: + +stdenv.mkDerivation rec { + pname = "retro-gtk"; + version = "1.0.2"; + + src = fetchurl { + url = "mirror://gnome/sources/retro-gtk/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + sha256 = "1lnb7dwcj3lrrvdzd85dxwrlid28xf4qdbrgfjyg1wn1z6sv063i"; + }; + + patches = [ + # https://gitlab.gnome.org/GNOME/retro-gtk/-/merge_requests/150 + ./gio-unix.patch + ]; + + nativeBuildInputs = [ + gobject-introspection + gtk-doc + meson + ninja + pkg-config + vala + ]; + + buildInputs = [ + epoxy + glib + gtk3 + libpulseaudio + libsamplerate + ]; + + meta = with lib; { + description = "The GTK Libretro frontend framework"; + longDescription = '' + Libretro is a plugin format design to implement video game + console emulators, video games and similar multimedia + software. Such plugins are called Libretro cores. + + RetroGTK is a framework easing the use of Libretro cores in + conjunction with GTK. + + It encourages the cores to be installed in a well defined + centralized place — namely the libretro subdirectory of your lib + directory — and it recommends them to come with Libretro core + descriptors. + ''; + homepage = "https://gitlab.gnome.org/GNOME/retro-gtk"; + changelog = "https://gitlab.gnome.org/GNOME/retro-gtk/-/blob/master/NEWS"; + license = licenses.gpl3Plus; + maintainers = [ maintainers.DamienCassou ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/retro-gtk/gio-unix.patch b/third_party/nixpkgs/pkgs/development/libraries/retro-gtk/gio-unix.patch new file mode 100644 index 0000000000..91f561c650 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/retro-gtk/gio-unix.patch @@ -0,0 +1,11 @@ +--- a/retro-gtk/meson.build 2021-03-21 20:25:51.000000000 +0100 ++++ b/retro-gtk/meson.build 2021-05-23 17:36:46.793693816 +0200 +@@ -103,6 +103,7 @@ + retro_gtk_deps = [ + epoxy, + gio, ++ gio_unix, + glib, + gmodule, + gobject, + diff --git a/third_party/nixpkgs/pkgs/development/libraries/rlottie/default.nix b/third_party/nixpkgs/pkgs/development/libraries/rlottie/default.nix index a8cd88cae5..f1d3ffd021 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/rlottie/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/rlottie/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "rlottie"; - version = "0.1"; + version = "0.2"; src = fetchFromGitHub { owner = "Samsung"; repo = pname; rev = "v${version}"; - hash = "sha256-8KQ0ZnVg5rTb44IYnn02WBSe2SA5UGUOSLEdmmscUDs="; + sha256 = "10bxr1zf9wxl55d4cw2j02r6sgqln7mbxplhhfvhw0z92fi40kr3"; }; nativeBuildInputs = [ meson ninja pkg-config ]; @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { meta = with lib; { homepage = "https://github.com/Samsung/rlottie"; description = "A platform independent standalone c++ library for rendering vector based animations and art in realtime"; - license = licenses.unfree; # Mixed, see https://github.com/Samsung/rlottie/blob/master/COPYING + license = with licenses; [ mit bsd3 mpl11 ftl ]; platforms = platforms.all; maintainers = with maintainers; [ CRTified ]; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/science/astronomy/indilib/default.nix b/third_party/nixpkgs/pkgs/development/libraries/science/astronomy/indilib/default.nix index 7a9a5a8070..eb0f34db26 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/science/astronomy/indilib/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/science/astronomy/indilib/default.nix @@ -15,13 +15,13 @@ stdenv.mkDerivation rec { pname = "indilib"; - version = "1.9.0"; + version = "1.9.1"; src = fetchFromGitHub { owner = "indilib"; repo = "indi"; rev = "v${version}"; - sha256 = "sha256-YdVBzhz+Gim27/Js5MhEJNukoXp5eK9/dZ+JQVyls0M="; + sha256 = "sha256-qXGTHyXhJrApexQL31fba0ZvnHEyTsY3Tb7aB4GpGn4="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/science/astronomy/indilib/indi-full.nix b/third_party/nixpkgs/pkgs/development/libraries/science/astronomy/indilib/indi-full.nix index 50aa9fb8b4..4ac9a122fd 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/science/astronomy/indilib/indi-full.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/science/astronomy/indilib/indi-full.nix @@ -1,12 +1,12 @@ { stdenv, lib, callPackage, fetchFromGitHub, indilib }: let - indi-version = "1.9.0"; + indi-version = "1.9.1"; indi-3rdparty-src = fetchFromGitHub { owner = "indilib"; repo = "indi-3rdparty"; rev = "v${indi-version}"; - sha256 = "sha256-5VR1MN52a0ZtaHYw4lD6LWmnvc1oHlfE5GLGbfBKvqE="; + sha256 = "sha256-F0O4WUYdUL6IjJyON/XJp78v4n5rj0unm1xTzEsEH0k="; }; indi-firmware = callPackage ./indi-firmware.nix { version = indi-version; diff --git a/third_party/nixpkgs/pkgs/development/libraries/science/chemistry/xcfun/default.nix b/third_party/nixpkgs/pkgs/development/libraries/science/chemistry/xcfun/default.nix new file mode 100644 index 0000000000..7f8ef3dc47 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/science/chemistry/xcfun/default.nix @@ -0,0 +1,30 @@ +{ stdenv, lib, fetchFromGitHub, cmake, gfortran, python3 } : + +stdenv.mkDerivation rec { + pname = "xcfun"; + version = "2.1.1"; + + src = fetchFromGitHub { + owner = "dftlibs"; + repo = pname; + rev = "v${version}"; + sha256= "1bj70cnhbh6ziy02x988wwl7cbwaq17ld7qwhswqkgnnx8rpgxid"; + }; + + nativeBuildInputs = [ + cmake + gfortran + ]; + + propagatedBuildInputs = [ (python3.withPackages (p: with p; [ pybind11 ])) ]; + + cmakeFlags = [ "-DXCFUN_MAX_ORDER=3" ]; + + meta = with lib; { + description = "A library of exchange-correlation functionals with arbitrary-order derivatives"; + homepage = "https://github.com/dftlibs/xcfun"; + license = licenses.mpl20; + platforms = platforms.linux; + maintainers = [ maintainers.sheepforce ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/science/math/libtorch/bin.nix b/third_party/nixpkgs/pkgs/development/libraries/science/math/libtorch/bin.nix index 87b5835aa9..efbd071ecd 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/science/math/libtorch/bin.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/science/math/libtorch/bin.nix @@ -18,7 +18,7 @@ let # this derivation. However, we should ensure on version bumps # that the CUDA toolkit for `passthru.tests` is still # up-to-date. - version = "1.8.1"; + version = "1.9.0"; device = if cudaSupport then "cuda" else "cpu"; srcs = import ./binary-hashes.nix version; unavailable = throw "libtorch is not available for this platform"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/science/math/libtorch/binary-hashes.nix b/third_party/nixpkgs/pkgs/development/libraries/science/math/libtorch/binary-hashes.nix index ec4522a755..6ded62fb87 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/science/math/libtorch/binary-hashes.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/science/math/libtorch/binary-hashes.nix @@ -1,14 +1,14 @@ version: { x86_64-darwin-cpu = { url = "https://download.pytorch.org/libtorch/cpu/libtorch-macos-${version}.zip"; - hash = "sha256-FYgnd5zlycjCYnP5bZcjpMdGYXrRERwhFFBYo/SJgzs="; + hash = "sha256-TOJ+iQpqazta46y4IzIbfEGMjz/fz+pRDV8fKqriB6Q="; }; x86_64-linux-cpu = { url = "https://download.pytorch.org/libtorch/cpu/libtorch-cxx11-abi-shared-with-deps-${version}%2Bcpu.zip"; - hash = "sha256-xneCcVrY25Whgbs/kPbwdS1Lc0e6RxsDRpA5lHTZigc="; + hash = "sha256-gZMNLCzW3j+eplBqWo6lVvuHS5iRqtMD8NL3MoszsVg="; }; x86_64-linux-cuda = { url = "https://download.pytorch.org/libtorch/cu111/libtorch-cxx11-abi-shared-with-deps-${version}%2Bcu111.zip"; - hash = "sha256-VW+TW00nD49GBztCyxHE4dTyy81aN/kfYE3hKQOIm50="; + hash = "sha256-dRu4F8k2SAbtghwrPJNyX0u3tsODCbXfi9EqUdf4xYc="; }; } diff --git a/third_party/nixpkgs/pkgs/development/libraries/science/math/openblas/default.nix b/third_party/nixpkgs/pkgs/development/libraries/science/math/openblas/default.nix index f464a755f6..5d3c3f40f1 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/science/math/openblas/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/science/math/openblas/default.nix @@ -17,6 +17,10 @@ , target ? null # Select whether DYNAMIC_ARCH is enabled or not. , dynamicArch ? null +# enable AVX512 optimized kernels. +# These kernels have been a source of trouble in the past. +# Use with caution. +, enableAVX512 ? false , enableStatic ? stdenv.hostPlatform.isStatic , enableShared ? !stdenv.hostPlatform.isStatic }: @@ -71,6 +75,7 @@ let BINARY = 64; TARGET = setTarget "ATHLON"; DYNAMIC_ARCH = setDynamicArch true; + NO_AVX512 = !enableAVX512; USE_OPENMP = false; MACOSX_DEPLOYMENT_TARGET = "10.7"; }; @@ -79,6 +84,7 @@ let BINARY = 64; TARGET = setTarget "ATHLON"; DYNAMIC_ARCH = setDynamicArch true; + NO_AVX512 = !enableAVX512; USE_OPENMP = !stdenv.hostPlatform.isMusl; }; @@ -88,6 +94,13 @@ let DYNAMIC_ARCH = setDynamicArch true; USE_OPENMP = !stdenv.hostPlatform.isMusl; }; + + riscv64-linux = { + BINARY = 64; + TARGET = setTarget "RISCV64_GENERIC"; + DYNAMIC_ARCH = setDynamicArch false; + USE_OPENMP = true; + }; }; in @@ -116,7 +129,7 @@ let in stdenv.mkDerivation rec { pname = "openblas"; - version = "0.3.13"; + version = "0.3.15"; outputs = [ "out" "dev" ]; @@ -124,16 +137,20 @@ stdenv.mkDerivation rec { owner = "xianyi"; repo = "OpenBLAS"; rev = "v${version}"; - sha256 = "14jxh0v3jfbw4mfjx4mcz4dd51lyq7pqvh9k8dg94539ypzjr2lj"; + sha256 = "1qjr02cqncv20abdp1yzr55n7smhx6h9chqvb0xbp18byynvj87w"; }; - # apply https://github.com/xianyi/OpenBLAS/pull/3060 to fix a crash on arm - # remove this when updating to 0.3.14 or newer + # remove both patches when updating to 0.3.16 patches = [ (fetchpatch { - name = "label-get_cpu_ftr-as-volatile.patch"; - url = "https://github.com/xianyi/OpenBLAS/commit/6fe0f1fab9d6a7f46d71d37ebb210fbf56924fbc.diff"; - sha256 = "06gwh73k4sas1ap2fi3jvpifbjkys2vhmnbj4mzrsvj279ljsfdk"; + name = "riscv64-imin-fix-wrong-comparison.patch"; + url = "https://github.com/xianyi/OpenBLAS/commit/1e0192a5ccac28fc0c749f49d36ec7eda9757428.patch"; + sha256 = "0kjkmrj8023vcjxhgin5dqs5w3gf93hzhwdhg0vsjhdra2ghkwzj"; + }) + (fetchpatch { + name = "riscv64-generic-use-generic-kernel-for-dsdot.patch"; + url = "https://github.com/xianyi/OpenBLAS/commit/3521cd48cbfb3d50f6ae9a10377382d37075c696.patch"; + sha256 = "0ljwbldff4db377s8rzmqxrszilqdivy656yqvfq46x5338v3gi0"; }) ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/science/math/tensorflow-lite/default.nix b/third_party/nixpkgs/pkgs/development/libraries/science/math/tensorflow-lite/default.nix new file mode 100644 index 0000000000..cf2346bad2 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/science/math/tensorflow-lite/default.nix @@ -0,0 +1,181 @@ +{ stdenv +, bash +, abseil-cpp +, fetchFromGitHub +, fetchFromGitLab +, fetchpatch +, fetchurl +, flatbuffers +, hostPlatform +, lib +, zlib +}: +let + tflite-eigen = fetchFromGitLab { + owner = "libeigen"; + repo = "eigen"; + rev = "3d9051ea84a5089b277c88dac456b3b1576bfa7f"; + sha256 = "1y3f2jvimb5i904f4n37h23cv2pkdlbz8656s0kga1y7c0p50wif"; + }; + + gemmlowp-src = fetchFromGitHub { + owner = "google"; + repo = "gemmlowp"; + rev = "fda83bdc38b118cc6b56753bd540caa49e570745"; + sha256 = "1sbp8kmr2azwlvfbzryy1frxi99jhsh1nc93bdbxdf8zdgpv0kxl"; + }; + + neon-2-sse-src = fetchFromGitHub { + owner = "intel"; + repo = "ARM_NEON_2_x86_SSE"; + rev = "1200fe90bb174a6224a525ee60148671a786a71f"; + sha256 = "0fhxch711ck809dpq1myxz63jiiwfcnxvj45ww0kg8s0pqpn5kv6"; + }; + + farmhash-src = fetchFromGitHub { + owner = "google"; + repo = "farmhash"; + rev = "816a4ae622e964763ca0862d9dbd19324a1eaf45"; + sha256 = "1mqxsljq476n1hb8ilkrpb39yz3ip2hnc7rhzszz4sri8ma7qzp6"; + }; + + fft2d-src = fetchurl { + url = "http://www.kurims.kyoto-u.ac.jp/~ooura/fft2d.tgz"; + sha256 = "ada7e99087c4ed477bfdf11413f2ba8db8a840ba9bbf8ac94f4f3972e2a7cec9"; + }; + + fp16-src = fetchFromGitHub { + owner = "Maratyszcza"; + repo = "FP16"; + rev = "4dfe081cf6bcd15db339cf2680b9281b8451eeb3"; + sha256 = "06a8dfl3a29r93nxpp6hpywsajz5d555n3sqd3i6krybb6swnvh7"; + }; + + ruy-src = fetchFromGitHub { + owner = "google"; + repo = "ruy"; + rev = "23633b37099b614a2f836ef012cafc8087fdb98c"; + sha256 = "14k9hz6ss8qy8nsajk6lrq25f6qxrldxky31ijw0dpqnfnnswrx4"; + }; + + cpuinfo-src = fetchFromGitHub { + owner = "pytorch"; + repo = "cpuinfo"; + rev = "5916273f79a21551890fd3d56fc5375a78d1598d"; + sha256 = "0q6760xdxsg18acdv8vq3yrq7ksr7wsm8zbyan01zf2khnb6fw4x"; + }; +in +stdenv.mkDerivation rec { + pname = "tensorflow-lite"; + version = "2.5.0"; + + src = fetchFromGitHub { + owner = "tensorflow"; + repo = "tensorflow"; + rev = "v${version}"; + sha256 = "1jdw2i1rq06zqd6aabh7bbm0avsg4pygnfmd7gviv0blhih9054l"; + }; + + patches = [ + # TODO: remove on the next version bump + (fetchpatch { + name = "include-schema-conversion-utils-source.patch"; + url = "https://github.com/tensorflow/tensorflow/commit/f3c4f4733692150fd6174f2cd16438cfaba2e5ab.patch"; + sha256 = "0zx4hbz679kn79f30159rl1mq74dg45cvaawii0cyv48z472yy4k"; + }) + # TODO: remove on the next version bump + (fetchpatch { + name = "cxxstandard-var.patch"; + url = "https://github.com/tensorflow/tensorflow/commit/9b128ae4200e10b4752f903492d1e7d11957ed5c.patch"; + sha256 = "1q0izdwdji5fbyqll6k4dmkzfykyvvz5cvc6hysdj285nkn2wy6h"; + }) + ]; + + buildInputs = [ zlib flatbuffers ]; + + dontConfigure = true; + + postPatch = '' + substituteInPlace ./tensorflow/lite/tools/make/Makefile \ + --replace /bin/bash ${bash}/bin/bash \ + --replace /bin/sh ${bash}/bin/sh + ''; + + makefile = "tensorflow/lite/tools/make/Makefile"; + + preBuild = + let + includes = + lib.concatMapStringsSep + " " + (subdir: "-I $PWD/tensorflow/lite/tools/make/downloads/${subdir}") + [ + "neon_2_sse" + "gemmlowp" + "absl" + "fp16/include" + "farmhash/src" + "ruy" + "cpuinfo" + "cpuinfo/src" + "cpuinfo/include" + "cpuinfo/deps/clog/include" + "eigen" + ]; + in + '' + # enter the vendoring lair of doom + + prefix="$PWD/tensorflow/lite/tools/make/downloads" + + mkdir -p "$prefix" + + tar xzf ${fft2d-src} -C "$prefix" + + ln -s ${ruy-src} "$prefix/ruy" + ln -s ${gemmlowp-src} "$prefix/gemmlowp" + ln -s ${neon-2-sse-src} "$prefix/neon_2_sse" + ln -s ${farmhash-src} "$prefix/farmhash" + ln -s ${cpuinfo-src} "$prefix/cpuinfo" + ln -s ${fp16-src} "$prefix/fp16" + ln -s ${tflite-eigen} "$prefix/eigen" + + # tensorflow lite is using the *source* of flatbuffers + ln -s ${flatbuffers.src} "$prefix/flatbuffers" + + # tensorflow lite expects to compile abseil into `libtensorflow-lite.a` + ln -s ${abseil-cpp.src} "$prefix/absl" + + # set CXXSTANDARD=c++17 here because abseil-cpp in nixpkgs is set as + # such and would be used in dependents like libedgetpu + buildFlagsArray+=( + INCLUDES="-I $PWD ${includes}" + CXXSTANDARD="-std=c++17" + TARGET_TOOLCHAIN_PREFIX="" + -j$NIX_BUILD_CORES + all) + ''; + + installPhase = '' + mkdir "$out" + + # copy the static lib and binaries into the output dir + cp -r ./tensorflow/lite/tools/make/gen/linux_${hostPlatform.uname.processor}/{bin,lib} "$out" + + find ./tensorflow/lite -type f -name '*.h' | while read f; do + path="$out/include/''${f/.\//}" + install -D "$f" "$path" + + # remove executable bit from headers + chmod -x "$path" + done + ''; + + meta = with lib; { + description = "An open source deep learning framework for on-device inference."; + homepage = "https://www.tensorflow.org/lite"; + license = licenses.asl20; + maintainers = with maintainers; [ cpcloud ]; + platforms = [ "x86_64-linux" "aarch64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/science/math/tensorflow-lite/eigen_include_dir.patch b/third_party/nixpkgs/pkgs/development/libraries/science/math/tensorflow-lite/eigen_include_dir.patch new file mode 100644 index 0000000000..6fa3c703ef --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/science/math/tensorflow-lite/eigen_include_dir.patch @@ -0,0 +1,45 @@ +diff --git a/CMakeLists.txt b/CMakeLists.txt +index 28103856e..a36909c0e 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -449,13 +449,6 @@ install(FILES + DESTINATION ${INCLUDE_INSTALL_DIR} COMPONENT Devel + ) + +-if(EIGEN_BUILD_PKGCONFIG) +- configure_file(eigen3.pc.in eigen3.pc @ONLY) +- install(FILES ${CMAKE_CURRENT_BINARY_DIR}/eigen3.pc +- DESTINATION ${PKGCONFIG_INSTALL_DIR} +- ) +-endif() +- + install(DIRECTORY Eigen DESTINATION ${INCLUDE_INSTALL_DIR} COMPONENT Devel) + + add_subdirectory(doc EXCLUDE_FROM_ALL) +@@ -570,8 +563,15 @@ set ( EIGEN_VERSION_MAJOR ${EIGEN_WORLD_VERSION} ) + set ( EIGEN_VERSION_MINOR ${EIGEN_MAJOR_VERSION} ) + set ( EIGEN_VERSION_PATCH ${EIGEN_MINOR_VERSION} ) + set ( EIGEN_DEFINITIONS "") +-set ( EIGEN_INCLUDE_DIR "${CMAKE_INSTALL_PREFIX}/${INCLUDE_INSTALL_DIR}" ) + set ( EIGEN_ROOT_DIR ${CMAKE_INSTALL_PREFIX} ) ++GNUInstallDirs_get_absolute_install_dir(EIGEN_INCLUDE_DIR INCLUDE_INSTALL_DIR) ++ ++if(EIGEN_BUILD_PKGCONFIG) ++ configure_file(eigen3.pc.in eigen3.pc @ONLY) ++ install(FILES ${CMAKE_CURRENT_BINARY_DIR}/eigen3.pc ++ DESTINATION ${PKGCONFIG_INSTALL_DIR} ++ ) ++endif() + + # Interface libraries require at least CMake 3.0 + if (NOT CMAKE_VERSION VERSION_LESS 3.0) +diff --git a/eigen3.pc.in b/eigen3.pc.in +index 3368a3aa1..d6778bf06 100644 +--- a/eigen3.pc.in ++++ b/eigen3.pc.in +@@ -6,4 +6,4 @@ Description: A C++ template library for linear algebra: vectors, matrices, and r + Requires: + Version: @EIGEN_VERSION_NUMBER@ + Libs: +-Cflags: -I${prefix}/@INCLUDE_INSTALL_DIR@ ++Cflags: -I@EIGEN_INCLUDE_DIR@ diff --git a/third_party/nixpkgs/pkgs/development/libraries/science/robotics/edgetpu-compiler/default.nix b/third_party/nixpkgs/pkgs/development/libraries/science/robotics/edgetpu-compiler/default.nix new file mode 100644 index 0000000000..adf8bdd54b --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/science/robotics/edgetpu-compiler/default.nix @@ -0,0 +1,58 @@ +{ autoPatchelfHook +, dpkg +, fetchurl +, lib +, libcxx +, stdenv +}: +stdenv.mkDerivation rec { + pname = "edgetpu-compiler"; + version = "15.0"; + + src = fetchurl rec { + url = "https://packages.cloud.google.com/apt/pool/${pname}_${version}_amd64_${sha256}.deb"; + sha256 = "ce03822053c2bddbb8640eaa988396ae66f9bc6b9d6d671914acd1727c2b445a"; + }; + + nativeBuildInputs = [ + autoPatchelfHook + dpkg + ]; + + buildInputs = [ + libcxx + ]; + + unpackPhase = '' + mkdir bin pkg + + dpkg -x $src pkg + + rm -r pkg/usr/share/lintian + + cp pkg/usr/bin/edgetpu_compiler_bin/edgetpu_compiler ./bin + cp -r pkg/usr/share . + + rm -r pkg + ''; + + dontConfigure = true; + dontBuild = true; + + installPhase = '' + runHook preInstall + + mkdir -p $out + cp -r ./{bin,share} $out + + runHook postInstall + ''; + + meta = with lib; { + description = "A command line tool that compiles a TensorFlow Lite model into an Edge TPU compatible file."; + homepage = "https://coral.ai/docs/edgetpu/compiler"; + license = licenses.asl20; + maintainers = with maintainers; [ cpcloud ]; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/libraries/skalibs/default.nix b/third_party/nixpkgs/pkgs/development/libraries/skalibs/default.nix index 3d90a8ebb2..09530db053 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/skalibs/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/skalibs/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "skalibs"; - version = "2.10.0.2"; - sha256 = "03qyi77wgcw3nzy7i932wd98d6j7nnzxc8ddl973vf5sa1v3vflb"; + version = "2.10.0.3"; + sha256 = "0ka6n5rnxd5sn5lycarf596d5wlak5s535zqqlz0rnhdcnpb105p"; description = "A set of general-purpose C programming libraries"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/snack/default.nix b/third_party/nixpkgs/pkgs/development/libraries/snack/default.nix index 4948e481ff..41d776c686 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/snack/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/snack/default.nix @@ -1,4 +1,4 @@ -# alsaLib vorbis-tools python can be made optional +# alsa-lib vorbis-tools python can be made optional { lib, stdenv, fetchurl, python, tcl, tk, vorbis-tools, pkg-config, xlibsWrapper }: diff --git a/third_party/nixpkgs/pkgs/development/libraries/sope/default.nix b/third_party/nixpkgs/pkgs/development/libraries/sope/default.nix index b956967ee8..25c65d8263 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/sope/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/sope/default.nix @@ -4,13 +4,13 @@ with lib; gnustep.stdenv.mkDerivation rec { pname = "sope"; - version = "5.0.1"; + version = "5.1.1"; src = fetchFromGitHub { owner = "inverse-inc"; repo = pname; rev = "SOPE-${version}"; - sha256 = "031m8ydr4jhh29332mfbsw0i5d0cjfqfyfs55jm832dlmv4447gb"; + sha256 = "0pap7c38kgadyp1a6qkmf9xhk69ybpmhfd4kc2n5nafhdbvks985"; }; hardeningDisable = [ "format" ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/speech-tools/default.nix b/third_party/nixpkgs/pkgs/development/libraries/speech-tools/default.nix index c54b4a3721..8706b87892 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/speech-tools/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/speech-tools/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, ncurses }: +{ lib, stdenv, fetchurl, alsa-lib, ncurses }: stdenv.mkDerivation rec { name = "speech_tools-${version}.0"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "1k2xh13miyv48gh06rgsq2vj25xwj7z6vwq9ilsn8i7ig3nrgzg4"; }; - buildInputs = [ alsaLib ncurses ]; + buildInputs = [ alsa-lib ncurses ]; preConfigure = '' sed -e s@/usr/bin/@@g -i $( grep -rl '/usr/bin/' . ) diff --git a/third_party/nixpkgs/pkgs/development/libraries/speechd/default.nix b/third_party/nixpkgs/pkgs/development/libraries/speechd/default.nix index 0f16a51916..80034a5a9c 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/speechd/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/speechd/default.nix @@ -15,7 +15,7 @@ , libsndfile , withLibao ? true, libao , withPulse ? false, libpulseaudio -, withAlsa ? false, alsaLib +, withAlsa ? false, alsa-lib , withOss ? false , withFlite ? true, flite # , withFestival ? false, festival-freebsoft-utils @@ -77,7 +77,7 @@ in stdenv.mkDerivation rec { libsndfile libao libpulseaudio - alsaLib + alsa-lib python ] ++ optionals withEspeak [ espeak diff --git a/third_party/nixpkgs/pkgs/development/libraries/spice/correct-meson.patch b/third_party/nixpkgs/pkgs/development/libraries/spice/correct-meson.patch deleted file mode 100644 index d3422cb915..0000000000 --- a/third_party/nixpkgs/pkgs/development/libraries/spice/correct-meson.patch +++ /dev/null @@ -1,26 +0,0 @@ -diff --git a/meson.build b/meson.build -index 8b8ae8bb..e58c436c 100644 ---- a/meson.build -+++ b/meson.build -@@ -2,7 +2,7 @@ - # project definition - # - project('spice', 'c', -- version : run_command('build-aux/git-version-gen', '${MESON_SOURCE_ROOT}/.tarball-version', check : true).stdout().strip(), -+ version : run_command('build-aux/git-version-gen', meson.source_root() + '/.tarball-version', check : true).stdout().strip(), - license : 'LGPLv2.1', - meson_version : '>= 0.48') - -diff --git a/server/meson.build b/server/meson.build -index 34d8eef1..988ccab2 100644 ---- a/server/meson.build -+++ b/server/meson.build -@@ -7,7 +7,7 @@ version_info = meson.project_version().split('.') - major = '@0@'.format(version_info[0]) - minor = '@0@'.format(version_info[1]) - micro = version_info[2].to_int() --if not version_info[3].contains('git') -+if not version_info.contains('git') - micro += 1 - endif - micro = '@0@'.format(micro) diff --git a/third_party/nixpkgs/pkgs/development/libraries/spice/default.nix b/third_party/nixpkgs/pkgs/development/libraries/spice/default.nix index 584b1e15a8..33677303dd 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/spice/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/spice/default.nix @@ -4,7 +4,7 @@ , ninja , pkg-config , pixman -, alsaLib +, alsa-lib , openssl , libXrandr , libXfixes @@ -26,18 +26,13 @@ stdenv.mkDerivation rec { pname = "spice"; - version = "0.14.2"; + version = "0.15.0"; src = fetchurl { - url = "https://www.spice-space.org/download/releases/${pname}-${version}.tar.bz2"; - sha256 = "19r999py9v9c7md2bb8ysj809ag1hh6djl1ik8jcgx065s4b60xj"; + url = "https://www.spice-space.org/download/releases/spice-server/${pname}-${version}.tar.bz2"; + sha256 = "1xd0xffw0g5vvwbq4ksmm3jjfq45f9dw20xpmi82g1fj9f7wy85k"; }; - patches = [ - # submitted https://gitlab.freedesktop.org/spice/spice/merge_requests/4 - ./correct-meson.patch - ]; - postPatch = '' patchShebangs build-aux ''; @@ -54,7 +49,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib cyrus_sasl glib gst_all_1.gst-plugins-base diff --git a/third_party/nixpkgs/pkgs/development/libraries/sqlite/default.nix b/third_party/nixpkgs/pkgs/development/libraries/sqlite/default.nix index 50b52b905a..e2331d8975 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/sqlite/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/sqlite/default.nix @@ -12,12 +12,12 @@ in stdenv.mkDerivation rec { pname = "sqlite"; - version = "3.35.2"; + version = "3.35.5"; # NB! Make sure to update ./tools.nix src (in the same directory). src = fetchurl { url = "https://sqlite.org/2021/sqlite-autoconf-${archiveVersion version}.tar.gz"; - sha256 = "1bfczv5006ycwr1vw7xbq7cmys0jvfr8awmx7wi1b40zyj0yss8j"; + sha256 = "9StypcMZw+UW7XqS4SMTmm6Hrwii3EPXdXck9hMubbA="; }; outputs = [ "bin" "dev" "out" ]; @@ -25,6 +25,11 @@ stdenv.mkDerivation rec { buildInputs = [ zlib ] ++ optionals interactive [ readline ncurses ]; + # required for aarch64 but applied for all arches for simplicity + preConfigure = '' + patchShebangs configure + ''; + configureFlags = [ "--enable-threadsafe" ] ++ optional interactive "--enable-readline"; NIX_CFLAGS_COMPILE = toString [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/sqlite/tools.nix b/third_party/nixpkgs/pkgs/development/libraries/sqlite/tools.nix index 45bcda727e..6c89a8496e 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/sqlite/tools.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/sqlite/tools.nix @@ -4,11 +4,11 @@ let archiveVersion = import ./archive-version.nix lib; mkTool = { pname, makeTarget, description, homepage }: stdenv.mkDerivation rec { inherit pname; - version = "3.35.2"; + version = "3.35.5"; src = assert version == sqlite.version; fetchurl { url = "https://sqlite.org/2021/sqlite-src-${archiveVersion version}.zip"; - sha256 = "00w7qggrdxpcrs4rfpqkjhcghi8pcx6zzjim9wlz6vsrxlr9dwva"; + sha256 = "049vdpk50sba786345ibmlxnkzk5zp4xj859658ancswb6jyrgpl"; }; nativeBuildInputs = [ unzip ]; diff --git a/third_party/nixpkgs/pkgs/development/libraries/srt/default.nix b/third_party/nixpkgs/pkgs/development/libraries/srt/default.nix index c8d8fafbf3..49c7612310 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/srt/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/srt/default.nix @@ -4,13 +4,13 @@ with lib; stdenv.mkDerivation rec { pname = "srt"; - version = "1.4.2"; + version = "1.4.3"; src = fetchFromGitHub { owner = "Haivision"; repo = "srt"; rev = "v${version}"; - sha256 = "01nx3a35hzq2x0dvp2n2b86phpdy1z83kdraag7aq3hmc7f8iagg"; + sha256 = "1f60vlfxhh9bhafws82c3301whjlz5gy92jz9a9ymwfg5h53bv1j"; }; nativeBuildInputs = [ cmake ]; @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { meta = { description = "Secure, Reliable, Transport"; - homepage = "https://www.srtalliance.org"; + homepage = "https://github.com/Haivision/srt"; license = licenses.mpl20; maintainers = with maintainers; [ nh2 ]; platforms = platforms.all; diff --git a/third_party/nixpkgs/pkgs/development/libraries/tcllib/default.nix b/third_party/nixpkgs/pkgs/development/libraries/tcllib/default.nix index 4cab15ca5c..90c4528a64 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/tcllib/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/tcllib/default.nix @@ -1,6 +1,6 @@ -{ lib, stdenv, fetchurl, tcl }: +{ lib, fetchurl, tcl }: -stdenv.mkDerivation rec { +tcl.mkTclDerivation rec { pname = "tcllib"; version = "1.20"; @@ -9,12 +9,6 @@ stdenv.mkDerivation rec { sha256 = "0wax281h6ksz974a5qpfgf9y34lmlpd8i87lkm1w94ybbd3rgc73"; }; - passthru = { - libPrefix = "tcllib${version}"; - }; - - buildInputs = [ tcl ]; - meta = { homepage = "https://sourceforge.net/projects/tcllib/"; description = "Tcl-only library of standard routines for Tcl"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/tcltls/default.nix b/third_party/nixpkgs/pkgs/development/libraries/tcltls/default.nix index e88358bbce..8883ad5dd4 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/tcltls/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/tcltls/default.nix @@ -1,33 +1,24 @@ -{ lib, stdenv, fetchurl, tcl, openssl }: +{ lib, fetchurl, tcl, openssl }: -stdenv.mkDerivation rec { +tcl.mkTclDerivation rec { pname = "tcltls"; - version = "1.6.7"; + version = "1.7.21"; src = fetchurl { - url = "mirror://sourceforge/tls/tls${version}-src.tar.gz"; - sha256 = "1f53sfcnrridjl5ayrq1xrqkahs8khf8c3d0m2brndbhahzdw6ai"; + url = "https://core.tcl-lang.org/tcltls/uv/tcltls-${version}.tar.gz"; + sha256 = "0xf1rfsnn4k9j1bd2a1p8ir0xr4a3phgr9lcgbazh4084l2y8sl0"; }; - buildInputs = [ tcl openssl ]; + buildInputs = [ openssl ]; configureFlags = [ - "--with-tcl=${tcl}/lib" - "--with-tclinclude=${tcl}/include" "--with-ssl-dir=${openssl.dev}" ]; - preConfigure = '' - configureFlags="--exec_prefix=$prefix $configureFlags" - ''; - - passthru = { - libPrefix = "tls${version}"; - }; - meta = { - homepage = "http://tls.sourceforge.net/"; + homepage = "https://core.tcl-lang.org/tcltls/index"; description = "An OpenSSL / RSA-bsafe Tcl extension"; + maintainers = [ lib.maintainers.agbrooks ]; license = lib.licenses.tcltk; platforms = lib.platforms.unix; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/tclx/default.nix b/third_party/nixpkgs/pkgs/development/libraries/tclx/default.nix index 85eae73057..a8cf2a44fa 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/tclx/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/tclx/default.nix @@ -1,6 +1,6 @@ -{ lib, stdenv, fetchurl, tcl }: +{ lib, fetchurl, tcl }: -stdenv.mkDerivation rec { +tcl.mkTclDerivation rec { name = "tclx-${version}.${patch}"; version = "8.4"; patch = "1"; @@ -10,13 +10,10 @@ stdenv.mkDerivation rec { sha256 = "1v2qwzzidz0is58fd1p7wfdbscxm3ip2wlbqkj5jdhf6drh1zd59"; }; - passthru = { - libPrefix = ""; # Using tclx${version} did not work - }; - - buildInputs = [ tcl ]; - - configureFlags = [ "--with-tcl=${tcl}/lib" "--exec-prefix=\${prefix}" ]; + # required in order for tclx to properly detect tclx.tcl at runtime + postInstall = '' + ln -s $prefix/lib/tclx${version} $prefix/lib/tclx${version}/tclx${version} + ''; meta = { homepage = "http://tclx.sourceforge.net/"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/thrift/default.nix b/third_party/nixpkgs/pkgs/development/libraries/thrift/default.nix index 04d9280e7b..a34fc36484 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/thrift/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/thrift/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { pname = "thrift"; - version = "0.14.1"; + version = "0.14.2"; src = fetchurl { url = "https://archive.apache.org/dist/thrift/${version}/${pname}-${version}.tar.gz"; - sha256 = "198c855mjy5byqfb941hiyq2j37baz63f0wcfy4vp8y8v4f5xnhk"; + sha256 = "sha256-QZG/wLdJDiDMafn03G6ZH7thLUVRqp7vHb9/TEfOVU0="; }; # Workaround to make the python wrapper not drop this package: diff --git a/third_party/nixpkgs/pkgs/development/libraries/tix/default.nix b/third_party/nixpkgs/pkgs/development/libraries/tix/default.nix index e0f91330ef..c42847ef53 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/tix/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/tix/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, tcl, tk, fetchpatch } : -stdenv.mkDerivation { +tcl.mkTclDerivation { version = "8.4.3"; pname = "tix"; src = fetchurl { @@ -20,7 +20,7 @@ stdenv.mkDerivation { sha256 = "1jaz0l22xj7x1k4rb9ia6i1psnbwk4pblgq4gfvya7gg7fbb7r36"; }) ; - buildInputs = [ tcl tk ]; + buildInputs = [ tk ]; # the configure script expects to find the location of the sources of # tcl and tk in {tcl,tk}Config.sh # In fact, it only needs some private headers. We copy them in @@ -34,8 +34,8 @@ stdenv.mkDerivation { ln -s $i private_headers/generic; done; ''; + addTclConfigureFlags = false; configureFlags = [ - "--with-tclinclude=${tcl}/include" "--with-tclconfig=." "--with-tkinclude=${tk.dev}/include" "--with-tkconfig=." @@ -52,4 +52,3 @@ stdenv.mkDerivation { ]; }; } - diff --git a/third_party/nixpkgs/pkgs/development/libraries/tk/generic.nix b/third_party/nixpkgs/pkgs/development/libraries/tk/generic.nix index ecb3840b2d..b829d846be 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/tk/generic.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/tk/generic.nix @@ -2,7 +2,7 @@ , enableAqua ? stdenv.isDarwin, darwin , ... }: -stdenv.mkDerivation { +tcl.mkTclDerivation { name = "tk-${tcl.version}"; inherit src patches; @@ -33,14 +33,13 @@ stdenv.mkDerivation { configureFlags = [ "--enable-threads" - "--with-tcl=${tcl}/lib" ] ++ lib.optional stdenv.is64bit "--enable-64bit" ++ lib.optional enableAqua "--enable-aqua"; nativeBuildInputs = [ pkg-config ]; buildInputs = lib.optional enableAqua (with darwin.apple_sdk.frameworks; [ Cocoa ]); - propagatedBuildInputs = [ tcl libXft ]; + propagatedBuildInputs = [ libXft ]; doCheck = false; # fails. can't find itself diff --git a/third_party/nixpkgs/pkgs/development/libraries/ubus/default.nix b/third_party/nixpkgs/pkgs/development/libraries/ubus/default.nix index db947d373a..4bbec39291 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/ubus/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/ubus/default.nix @@ -2,22 +2,22 @@ stdenv.mkDerivation { pname = "ubus"; - version = "unstable-2020-01-05"; + version = "unstable-2021-02-15"; src = fetchgit { url = "https://git.openwrt.org/project/ubus.git"; - rev = "d35df8adda873dc75d876f72b78e84db8cfa72ee"; - sha256 = "1ksrih5vfyixaafzsrs6ab88qw34d0197wvw201jl5p1fc7drgn4"; + rev = "2537be01858710e714c329153760c64fe3f8a73e"; + sha256 = "03ljxsn4w87bfrilccxhrkzqmd30hy6ihkvsinw0i3l7rpp5m4a7"; }; - cmakeFlags = [ "-D BUILD_LUA:BOOL=OFF" ]; + cmakeFlags = [ "-DBUILD_LUA=OFF" ]; buildInputs = [ libubox libjson ]; nativeBuildInputs = [ cmake ]; meta = with lib; { description = "OpenWrt system message/RPC bus"; homepage = "https://git.openwrt.org/?p=project/ubus.git;a=summary"; - license = licenses.lgpl21; + license = licenses.lgpl21Only; platforms = platforms.all; maintainers = with maintainers; [ petabyteboy ]; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/uci/default.nix b/third_party/nixpkgs/pkgs/development/libraries/uci/default.nix index 0a5af8b907..49aba6cd18 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/uci/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/uci/default.nix @@ -2,23 +2,23 @@ stdenv.mkDerivation { pname = "uci"; - version = "unstable-2020-04-27"; + version = "unstable-2021-04-14"; src = fetchgit { url = "https://git.openwrt.org/project/uci.git"; - rev = "ec8d3233948603485e1b97384113fac9f1bab5d6"; - sha256 = "0p765l8znvwhzhgkq7dp36w62k5rmzav59vgdqmqq1bjmlz1yyi6"; + rev = "4b3db1179747b6a6779029407984bacef851325c"; + sha256 = "1zflxazazzkrycpflzfg420kzp7kgy4dlz85cms279vk07dc1d52"; }; hardeningDisable = [ "all" ]; - cmakeFlags = [ "-D BUILD_LUA:BOOL=OFF" ]; + cmakeFlags = [ "-DBUILD_LUA=OFF" ]; buildInputs = [ libubox ]; nativeBuildInputs = [ cmake pkg-config ]; meta = with lib; { description = "OpenWrt Unified Configuration Interface"; homepage = "https://git.openwrt.org/?p=project/uci.git;a=summary"; - license = licenses.lgpl21; + license = licenses.lgpl21Only; platforms = platforms.all; maintainers = with maintainers; [ petabyteboy ]; }; diff --git a/third_party/nixpkgs/pkgs/development/libraries/utmps/default.nix b/third_party/nixpkgs/pkgs/development/libraries/utmps/default.nix index 107c23dcb5..be74748cb3 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/utmps/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/utmps/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "utmps"; - version = "0.1.0.0"; - sha256 = "09p0k2sgxr7jlsbrn66fzvzf9zxvpjp85y79xk10hxjglypszyml"; + version = "0.1.0.2"; + sha256 = "1vjza7m65ziq54q0sv46kb3lss9cmxkkv0n9h3i8505x0h2hlvlb"; description = "A secure utmpx and wtmp implementation"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/wayland/protocols.nix b/third_party/nixpkgs/pkgs/development/libraries/wayland/protocols.nix index 8a2b05aa4d..7f3ec5f3d5 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/wayland/protocols.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/wayland/protocols.nix @@ -1,15 +1,29 @@ -{ lib, stdenv, fetchurl, wayland-scanner }: +{ lib, stdenv, fetchurl +, pkg-config +, meson, ninja, wayland-scanner +, python3, wayland +}: stdenv.mkDerivation rec { pname = "wayland-protocols"; version = "1.21"; + doCheck = stdenv.hostPlatform == stdenv.buildPlatform; + src = fetchurl { url = "https://wayland.freedesktop.org/releases/${pname}-${version}.tar.xz"; sha256 = "1rfdlkzz67qsb955zqb8jbw3m22pl6ppvrvfq8bqiqcb5n24b6dr"; }; - nativeBuildInputs = [ wayland-scanner ]; + postPatch = lib.optionalString doCheck '' + patchShebangs tests/ + ''; + + depsBuildBuild = [ pkg-config ]; + nativeBuildInputs = [ meson ninja wayland-scanner ]; + checkInputs = [ python3 wayland ]; + + mesonFlags = [ "-Dtests=${lib.boolToString doCheck}" ]; meta = { description = "Wayland protocol extensions"; diff --git a/third_party/nixpkgs/pkgs/development/libraries/webrtc-audio-processing/default.nix b/third_party/nixpkgs/pkgs/development/libraries/webrtc-audio-processing/default.nix index efd2ce3b1f..d757789fc2 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/webrtc-audio-processing/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/webrtc-audio-processing/default.nix @@ -8,6 +8,8 @@ stdenv.mkDerivation rec { sha256 = "1gsx7k77blfy171b6g3m0k0s0072v6jcawhmx1kjs9w5zlwdkzd0"; }; + patches = [ ./enable-riscv.patch ]; + buildInputs = lib.optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ ApplicationServices ]); patchPhase = lib.optionalString stdenv.hostPlatform.isMusl '' diff --git a/third_party/nixpkgs/pkgs/development/libraries/webrtc-audio-processing/enable-riscv.patch b/third_party/nixpkgs/pkgs/development/libraries/webrtc-audio-processing/enable-riscv.patch new file mode 100644 index 0000000000..d61c33548a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/libraries/webrtc-audio-processing/enable-riscv.patch @@ -0,0 +1,18 @@ +diff --git a/webrtc/typedefs.h b/webrtc/typedefs.h +index d875490..ce1f3e8 100644 +--- a/webrtc/typedefs.h ++++ b/webrtc/typedefs.h +@@ -26,6 +26,13 @@ + #elif defined(__aarch64__) + #define WEBRTC_ARCH_64_BITS + #define WEBRTC_ARCH_LITTLE_ENDIAN ++#elif defined(__riscv) || defined(__riscv__) ++#define WEBRTC_ARCH_LITTLE_ENDIAN ++#if __riscv_xlen == 64 ++#define WEBRTC_ARCH_64_BITS ++#else ++#define WEBRTC_ARCH_32_BITS ++#endif + #elif defined(_M_IX86) || defined(__i386__) + #define WEBRTC_ARCH_X86_FAMILY + #define WEBRTC_ARCH_X86 diff --git a/third_party/nixpkgs/pkgs/development/libraries/wildmidi/default.nix b/third_party/nixpkgs/pkgs/development/libraries/wildmidi/default.nix index 880823a847..81c1b51e65 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/wildmidi/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/wildmidi/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, cmake, alsaLib, freepats }: +{ lib, stdenv, fetchurl, cmake, alsa-lib, freepats }: stdenv.mkDerivation rec { name = "wildmidi-0.4.3"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; - buildInputs = [ alsaLib stdenv.cc.libc/*couldn't find libm*/ ]; + buildInputs = [ alsa-lib stdenv.cc.libc/*couldn't find libm*/ ]; preConfigure = '' substituteInPlace CMakeLists.txt \ diff --git a/third_party/nixpkgs/pkgs/development/libraries/wlroots/default.nix b/third_party/nixpkgs/pkgs/development/libraries/wlroots/default.nix index f2343e73c5..45c2fd228f 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/wlroots/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/wlroots/default.nix @@ -1,18 +1,18 @@ { lib, stdenv, fetchFromGitHub, meson, ninja, pkg-config, wayland-scanner , libGL, wayland, wayland-protocols, libinput, libxkbcommon, pixman , xcbutilwm, libX11, libcap, xcbutilimage, xcbutilerrors, mesa -, libpng, ffmpeg, libuuid, xcbutilrenderutil, xwayland +, libpng, ffmpeg, xcbutilrenderutil, xwayland, seatd }: stdenv.mkDerivation rec { pname = "wlroots"; - version = "0.13.0"; + version = "0.14.0"; src = fetchFromGitHub { owner = "swaywm"; repo = "wlroots"; rev = version; - sha256 = "01plhbnsp5yg18arz0v8fr0pr9l4w4pdzwkg9px486qdvb3s1vgy"; + sha256 = "103sf9bsyqw18kmaih11mlxwqi9ddymm95w1lfxz06pf69xwhd39"; }; # $out for the library and $examples for the example programs (in examples): @@ -23,11 +23,9 @@ stdenv.mkDerivation rec { buildInputs = [ libGL wayland wayland-protocols libinput libxkbcommon pixman xcbutilwm libX11 libcap xcbutilimage xcbutilerrors mesa - libpng ffmpeg libuuid xcbutilrenderutil xwayland + libpng ffmpeg xcbutilrenderutil xwayland seatd ]; - mesonFlags = [ "-Dlogind-provider=systemd" "-Dlibseat=disabled" ]; - postFixup = '' # Install ALL example programs to $examples: # screencopy dmabuf-capture input-inhibitor layer-shell idle-inhibit idle diff --git a/third_party/nixpkgs/pkgs/development/libraries/xcb-imdkit/default.nix b/third_party/nixpkgs/pkgs/development/libraries/xcb-imdkit/default.nix index a3bcc822b3..b2e56c8193 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/xcb-imdkit/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/xcb-imdkit/default.nix @@ -10,13 +10,13 @@ stdenv.mkDerivation rec { pname = "xcb-imdkit"; - version = "1.0.2"; + version = "1.0.3"; src = fetchFromGitHub { owner = "fcitx"; repo = "xcb-imdkit"; rev = version; - sha256 = "sha256-ISaVsMtDsyfhbhsAwDSWkQ7ZcpNtvC7M9NFQsWA5ju8="; + sha256 = "sha256-IPuTRSgmrnCJRgGWcE4JRaxd0sGCcHrKRnn2B1OdDMU="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/xdg-desktop-portal-wlr/default.nix b/third_party/nixpkgs/pkgs/development/libraries/xdg-desktop-portal-wlr/default.nix index 3739284d70..4f842e5de1 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/xdg-desktop-portal-wlr/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/xdg-desktop-portal-wlr/default.nix @@ -1,20 +1,20 @@ { lib, stdenv, fetchFromGitHub, makeWrapper , meson, ninja, pkg-config, wayland-protocols -, pipewire, wayland, systemd, libdrm, iniparser, scdoc, grim, slurp }: +, pipewire, wayland, systemd, libdrm, inih, scdoc, grim, slurp }: stdenv.mkDerivation rec { pname = "xdg-desktop-portal-wlr"; - version = "0.3.0"; + version = "0.4.0"; src = fetchFromGitHub { owner = "emersion"; repo = pname; rev = "v${version}"; - sha256 = "sha256-6ArUQfWx5rNdpsd8Q22MqlpxLT8GTSsymAf21zGe1KI="; + sha256 = "sha256:13fbzh8bjnhk4xs8j9bpc01q3hy27zpbf0gkk1fnh3hm5pnyfyiv"; }; nativeBuildInputs = [ meson ninja pkg-config wayland-protocols makeWrapper ]; - buildInputs = [ pipewire wayland systemd libdrm iniparser scdoc ]; + buildInputs = [ pipewire wayland systemd libdrm inih scdoc ]; mesonFlags = [ "-Dsd-bus-provider=libsystemd" diff --git a/third_party/nixpkgs/pkgs/development/libraries/xine-lib/default.nix b/third_party/nixpkgs/pkgs/development/libraries/xine-lib/default.nix index 8915299a73..70fdf24dd9 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/xine-lib/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/xine-lib/default.nix @@ -2,7 +2,7 @@ , stdenv , fetchurl , aalib -, alsaLib +, alsa-lib , ffmpeg , flac , libGL @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ aalib - alsaLib + alsa-lib ffmpeg flac libGL diff --git a/third_party/nixpkgs/pkgs/development/libraries/zchunk/default.nix b/third_party/nixpkgs/pkgs/development/libraries/zchunk/default.nix index 2037d815a8..cf0063f778 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/zchunk/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/zchunk/default.nix @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { pname = "zchunk"; - version = "1.1.9"; + version = "1.1.11"; outputs = [ "out" "lib" "dev" ]; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { owner = "zchunk"; repo = pname; rev = version; - hash = "sha256-MqnHtqOjLl6R5GZ4f2UX1iLoO9FUT2IfZlSN58wW8JA="; + hash = "sha256-r+qWJOUnTyPJjM9eW44Q2DMKxx4HloyfNrQ6xWDO9vQ="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/libraries/zimlib/default.nix b/third_party/nixpkgs/pkgs/development/libraries/zimlib/default.nix index 76d54ed625..9f8e357d3a 100644 --- a/third_party/nixpkgs/pkgs/development/libraries/zimlib/default.nix +++ b/third_party/nixpkgs/pkgs/development/libraries/zimlib/default.nix @@ -11,13 +11,13 @@ stdenv.mkDerivation rec { pname = "zimlib"; - version = "6.3.0"; + version = "6.3.2"; src = fetchFromGitHub { owner = "openzim"; repo = "libzim"; rev = version; - sha256 = "0iy0f1clhihq277x218ccx3mszgpr3h9l0by48b9ykr115nffw3s"; + sha256 = "sha256-xlYu74akK9WFy86hcQe7zp11TImwl8llgDIZBRgmbAI="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/misc/newlib/default.nix b/third_party/nixpkgs/pkgs/development/misc/newlib/default.nix index 193ec53d5a..870aa068af 100644 --- a/third_party/nixpkgs/pkgs/development/misc/newlib/default.nix +++ b/third_party/nixpkgs/pkgs/development/misc/newlib/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, buildPackages }: -let version = "3.3.0"; -in stdenv.mkDerivation { +stdenv.mkDerivation rec { pname = "newlib"; - inherit version; + version = "4.1.0"; + src = fetchurl { url = "ftp://sourceware.org/pub/newlib/newlib-${version}.tar.gz"; - sha256 = "0ricyx792ig2cb2x31b653yb7w7f7mf2111dv5h96lfzmqz9xpaq"; + sha256 = "0m01sjjyj0ib7bwlcrvmk1qkkgd66zf1dhbw716j490kymrf75pj"; }; depsBuildBuild = [ buildPackages.stdenv.cc ]; diff --git a/third_party/nixpkgs/pkgs/development/mobile/androidenv/emulator.nix b/third_party/nixpkgs/pkgs/development/mobile/androidenv/emulator.nix index c8fce166aa..2746a60247 100644 --- a/third_party/nixpkgs/pkgs/development/mobile/androidenv/emulator.nix +++ b/third_party/nixpkgs/pkgs/development/mobile/androidenv/emulator.nix @@ -26,7 +26,7 @@ deployAndroidPackage { pkgs.freetype pkgs.nss pkgs.nspr - pkgs.alsaLib + pkgs.alsa-lib ]; patchInstructions = lib.optionalString (os == "linux") '' addAutoPatchelfSearchPath $packageBaseDir/lib diff --git a/third_party/nixpkgs/pkgs/development/mobile/androidenv/examples/shell.nix b/third_party/nixpkgs/pkgs/development/mobile/androidenv/examples/shell.nix index 45cccf22c7..074dfc001e 100644 --- a/third_party/nixpkgs/pkgs/development/mobile/androidenv/examples/shell.nix +++ b/third_party/nixpkgs/pkgs/development/mobile/androidenv/examples/shell.nix @@ -3,7 +3,7 @@ # This example pins nixpkgs: https://nix.dev/tutorials/towards-reproducibility-pinning-nixpkgs.html /*nixpkgsSource ? (builtins.fetchTarball { name = "nixpkgs-20.09"; - url = https://github.com/NixOS/nixpkgs/archive/20.09.tar.gz; + url = "https://github.com/NixOS/nixpkgs/archive/20.09.tar.gz"; sha256 = "1wg61h4gndm3vcprdcg7rc4s1v3jkm5xd7lw8r2f67w502y94gcy"; }), pkgs ? import nixpkgsSource {}, @@ -41,7 +41,7 @@ let # If you copy this example out of nixpkgs, something like this will work: /*androidEnvNixpkgs = fetchTarball { name = "androidenv"; - url = https://github.com/NixOS/nixpkgs/archive/.tar.gz; + url = "https://github.com/NixOS/nixpkgs/archive/.tar.gz"; sha256 = ""; }; diff --git a/third_party/nixpkgs/pkgs/development/node-packages/default.nix b/third_party/nixpkgs/pkgs/development/node-packages/default.nix index d777396834..19fff0c71f 100644 --- a/third_party/nixpkgs/pkgs/development/node-packages/default.nix +++ b/third_party/nixpkgs/pkgs/development/node-packages/default.nix @@ -217,13 +217,13 @@ let netlify-cli = let esbuild = pkgs.esbuild.overrideAttrs (old: rec { - version = "0.11.14"; + version = "0.13.6"; src = fetchFromGitHub { - owner = "evanw"; + owner = "netlify"; repo = "esbuild"; rev = "v${version}"; - sha256 = "sha256-N7WNam0zF1t++nLVhuxXSDGV/JaFtlFhufp+etinvmM="; + sha256 = "0asjmqfzdrpfx2hd5hkac1swp52qknyqavsm59j8xr4c1ixhc6n9"; }; }); diff --git a/third_party/nixpkgs/pkgs/development/node-packages/node-packages.json b/third_party/nixpkgs/pkgs/development/node-packages/node-packages.json index 27d13e4ade..ea8f2ef7a1 100644 --- a/third_party/nixpkgs/pkgs/development/node-packages/node-packages.json +++ b/third_party/nixpkgs/pkgs/development/node-packages/node-packages.json @@ -126,7 +126,7 @@ , "indium" , "insect" , "ionic" -, {"iosevka": "https://github.com/be5invis/Iosevka/archive/v5.0.2.tar.gz"} +, {"iosevka": "https://github.com/be5invis/Iosevka/archive/v7.0.4.tar.gz"} , "jake" , "javascript-typescript-langserver" , "joplin" @@ -142,6 +142,7 @@ , "kaput-cli" , "katex" , "karma" +, "keyoxide" , "lcov-result-merger" , "leetcode-cli" , "vsc-leetcode-cli" @@ -273,4 +274,5 @@ , "yaml-language-server" , "yarn" , "yo" +, "zx" ] diff --git a/third_party/nixpkgs/pkgs/development/node-packages/node-packages.nix b/third_party/nixpkgs/pkgs/development/node-packages/node-packages.nix index d5381c9c28..92a931bd4b 100644 --- a/third_party/nixpkgs/pkgs/development/node-packages/node-packages.nix +++ b/third_party/nixpkgs/pkgs/development/node-packages/node-packages.nix @@ -49,13 +49,13 @@ let sha512 = "o/xdK8b4P0t/xpCARgWXAeaiWeh9jeua6bP1jrcbfN39+Z4zC4x2jg4NysHNhz6spRG8dJFH3kJIUoIbs0Ckww=="; }; }; - "@angular-devkit/architect-0.1200.2" = { + "@angular-devkit/architect-0.1200.5" = { name = "_at_angular-devkit_slash_architect"; packageName = "@angular-devkit/architect"; - version = "0.1200.2"; + version = "0.1200.5"; src = fetchurl { - url = "https://registry.npmjs.org/@angular-devkit/architect/-/architect-0.1200.2.tgz"; - sha512 = "Vy/dE1iwEiV63cxcU+SC+Lf5SUnY64vg9J3YA3jxFlJnELbxxN+T7xDfjMEMPoLzTY02K9XNb8ZGLStZxVmZLg=="; + url = "https://registry.npmjs.org/@angular-devkit/architect/-/architect-0.1200.5.tgz"; + sha512 = "222VZ4OeaDK3vON8V5m+w15SRWfUs5uOb4H9ij/H9/6tyHD83uWfCDoOGg+ax4wJVdWEFJIS+Vn4ijGcZCq9WQ=="; }; }; "@angular-devkit/core-11.2.4" = { @@ -76,13 +76,13 @@ let sha512 = "3dA0Z6sIIxCDjZS/DucgmIKti7EZ/LgHoHgCO72Q50H5ZXbUSNBz5wGl5hVq2+gzrnFgU/0u40MIs6eptk30ZA=="; }; }; - "@angular-devkit/core-12.0.2" = { + "@angular-devkit/core-12.0.5" = { name = "_at_angular-devkit_slash_core"; packageName = "@angular-devkit/core"; - version = "12.0.2"; + version = "12.0.5"; src = fetchurl { - url = "https://registry.npmjs.org/@angular-devkit/core/-/core-12.0.2.tgz"; - sha512 = "n7BmZAW0nx4pEigdAsibvtIm4Vjk1IwY3Bbc8fqD+AQpdYCo+Ake1Eu6fL2XoW8Yco7U4JYYdn/uodWEgBdroQ=="; + url = "https://registry.npmjs.org/@angular-devkit/core/-/core-12.0.5.tgz"; + sha512 = "zVSQV+8/vjUjsUKGlj8Kf5LioA6AXJTGI0yhHW9q1dFX4dPpbW63k0R1UoIB2wJ0F/AbYVgpnPGPe9BBm2fvZA=="; }; }; "@angular-devkit/schematics-11.2.4" = { @@ -103,13 +103,13 @@ let sha512 = "bhi2+5xtVAjtr3bsXKT8pnoBamQrArd/Y20ueA4Od7cd38YT97nzTA1wyHBFG0vWd0HMyg42ZS0aycNBuOebaA=="; }; }; - "@angular-devkit/schematics-12.0.2" = { + "@angular-devkit/schematics-12.0.5" = { name = "_at_angular-devkit_slash_schematics"; packageName = "@angular-devkit/schematics"; - version = "12.0.2"; + version = "12.0.5"; src = fetchurl { - url = "https://registry.npmjs.org/@angular-devkit/schematics/-/schematics-12.0.2.tgz"; - sha512 = "PS+SrRhAc/lyRfuBsi6Rt2yV7IA34B7T6J0K8/Av0GABZ83x+0vLiZC39eSPS1X8qcM/U09pCfDT8Q6ZQPCICA=="; + url = "https://registry.npmjs.org/@angular-devkit/schematics/-/schematics-12.0.5.tgz"; + sha512 = "iW3XuDHScr3TXuunlEjF5O01zBpwpLgfr1oEny8PvseFGDlHK4Nj8zNIoIn3Yg936aiFO4GJAC/UXsT8g5vKxQ=="; }; }; "@angular-devkit/schematics-cli-0.1102.6" = { @@ -229,13 +229,13 @@ let sha512 = "eorTmZW7zc6ZHgGLt3Vrq7mzPuobPeJnyfli50/m/DIQ91slkqjPKUYGcq4paPEz6IWoa7LT2ZwtwA5KzMyTPg=="; }; }; - "@apidevtools/json-schema-ref-parser-9.0.7" = { + "@apidevtools/json-schema-ref-parser-9.0.9" = { name = "_at_apidevtools_slash_json-schema-ref-parser"; packageName = "@apidevtools/json-schema-ref-parser"; - version = "9.0.7"; + version = "9.0.9"; src = fetchurl { - url = "https://registry.npmjs.org/@apidevtools/json-schema-ref-parser/-/json-schema-ref-parser-9.0.7.tgz"; - sha512 = "QdwOGF1+eeyFh+17v2Tz626WX0nucd1iKOm6JUTUvCZdbolblCOOQCxGrQPY0f7jEhn36PiAWqZnsC2r5vmUWg=="; + url = "https://registry.npmjs.org/@apidevtools/json-schema-ref-parser/-/json-schema-ref-parser-9.0.9.tgz"; + sha512 = "GBD2Le9w2+lVFoc4vswGI/TjkNIZSVp7+9xPf+X3uidBfWnAeUWmquteSyt0+VCrhNMWj/FTABISQrD3Z/YA+w=="; }; }; "@apollo/protobufjs-1.2.2" = { @@ -310,13 +310,13 @@ let sha1 = "e70187f8a862e191b1bce6c0268f13acd3a56b20"; }; }; - "@babel/cli-7.14.3" = { + "@babel/cli-7.14.5" = { name = "_at_babel_slash_cli"; packageName = "@babel/cli"; - version = "7.14.3"; + version = "7.14.5"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/cli/-/cli-7.14.3.tgz"; - sha512 = "zU4JLvwk32ay1lhhyGfqiRUSPoltVDjhYkA3aQq8+Yby9z30s/EsFw1EPOHxWG9YZo2pAGfgdRNeHZQAYU5m9A=="; + url = "https://registry.npmjs.org/@babel/cli/-/cli-7.14.5.tgz"; + sha512 = "poegjhRvXHWO0EAsnYajwYZuqcz7gyfxwfaecUESxDujrqOivf3zrjFbub8IJkrqEaz3fvJWh001EzxBub54fg=="; }; }; "@babel/code-frame-7.10.4" = { @@ -337,22 +337,22 @@ let sha512 = "Zt1yodBx1UcyiePMSkWnU4hPqhwq7hGi2nFL1LeA3EUl+q2LQx16MISgJ0+z7dnmgvP9QtIleuETGOiOH1RcIw=="; }; }; - "@babel/code-frame-7.12.13" = { + "@babel/code-frame-7.14.5" = { name = "_at_babel_slash_code-frame"; packageName = "@babel/code-frame"; - version = "7.12.13"; + version = "7.14.5"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/code-frame/-/code-frame-7.12.13.tgz"; - sha512 = "HV1Cm0Q3ZrpCR93tkWOYiuYIgLxZXZFVG2VgK+MBWjUqZTundupbfx2aXarXuw5Ko5aMcjtJgbSs4vUGBS5v6g=="; + url = "https://registry.npmjs.org/@babel/code-frame/-/code-frame-7.14.5.tgz"; + sha512 = "9pzDqyc6OLDaqe+zbACgFkb6fKMNG6CObKpnYXChRsvYGyEdc7CA2BaqeOM+vOtCS5ndmJicPJhKAwYRI6UfFw=="; }; }; - "@babel/compat-data-7.14.4" = { + "@babel/compat-data-7.14.7" = { name = "_at_babel_slash_compat-data"; packageName = "@babel/compat-data"; - version = "7.14.4"; + version = "7.14.7"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/compat-data/-/compat-data-7.14.4.tgz"; - sha512 = "i2wXrWQNkH6JplJQGn3Rd2I4Pij8GdHkXwHMxm+zV5YG/Jci+bCNrWZEWC4o+umiDkRrRs4dVzH3X4GP7vyjQQ=="; + url = "https://registry.npmjs.org/@babel/compat-data/-/compat-data-7.14.7.tgz"; + sha512 = "nS6dZaISCXJ3+518CWiBfEr//gHyMO02uDxBkXTKZDN5POruCnOZ1N4YBRZDCabwF8nZMWBpRxIicmXtBs+fvw=="; }; }; "@babel/core-7.10.5" = { @@ -364,13 +364,13 @@ let sha512 = "O34LQooYVDXPl7QWCdW9p4NR+QlzOr7xShPPJz8GsuCU3/8ua/wqTr7gmnxXv+WBESiGU/G5s16i6tUvHkNb+w=="; }; }; - "@babel/core-7.14.3" = { + "@babel/core-7.14.6" = { name = "_at_babel_slash_core"; packageName = "@babel/core"; - version = "7.14.3"; + version = "7.14.6"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/core/-/core-7.14.3.tgz"; - sha512 = "jB5AmTKOCSJIZ72sd78ECEhuPiDMKlQdDI/4QRI6lzYATx5SSogS1oQA2AoPecRCknm30gHi2l+QVvNUu3wZAg=="; + url = "https://registry.npmjs.org/@babel/core/-/core-7.14.6.tgz"; + sha512 = "gJnOEWSqTk96qG5BoIrl5bVtc23DCycmIePPYnamY9RboYdI4nFy5vAQMSl81O5K/W0sLDWfGysnOECC+KUUCA=="; }; }; "@babel/core-7.9.0" = { @@ -382,58 +382,58 @@ let sha512 = "kWc7L0fw1xwvI0zi8OKVBuxRVefwGOrKSQMvrQ3dW+bIIavBY3/NpXmpjMy7bQnLgwgzWQZ8TlM57YHpHNHz4w=="; }; }; - "@babel/generator-7.14.3" = { + "@babel/generator-7.14.5" = { name = "_at_babel_slash_generator"; packageName = "@babel/generator"; - version = "7.14.3"; + version = "7.14.5"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/generator/-/generator-7.14.3.tgz"; - sha512 = "bn0S6flG/j0xtQdz3hsjJ624h3W0r3llttBMfyHX3YrZ/KtLYr15bjA0FXkgW7FpvrDuTuElXeVjiKlYRpnOFA=="; + url = "https://registry.npmjs.org/@babel/generator/-/generator-7.14.5.tgz"; + sha512 = "y3rlP+/G25OIX3mYKKIOlQRcqj7YgrvHxOLbVmyLJ9bPmi5ttvUmpydVjcFjZphOktWuA7ovbx91ECloWTfjIA=="; }; }; - "@babel/helper-annotate-as-pure-7.12.13" = { + "@babel/helper-annotate-as-pure-7.14.5" = { name = "_at_babel_slash_helper-annotate-as-pure"; packageName = "@babel/helper-annotate-as-pure"; - version = "7.12.13"; + version = "7.14.5"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/helper-annotate-as-pure/-/helper-annotate-as-pure-7.12.13.tgz"; - sha512 = "7YXfX5wQ5aYM/BOlbSccHDbuXXFPxeoUmfWtz8le2yTkTZc+BxsiEnENFoi2SlmA8ewDkG2LgIMIVzzn2h8kfw=="; + url = "https://registry.npmjs.org/@babel/helper-annotate-as-pure/-/helper-annotate-as-pure-7.14.5.tgz"; + sha512 = "EivH9EgBIb+G8ij1B2jAwSH36WnGvkQSEC6CkX/6v6ZFlw5fVOHvsgGF4uiEHO2GzMvunZb6tDLQEQSdrdocrA=="; }; }; - "@babel/helper-builder-binary-assignment-operator-visitor-7.12.13" = { + "@babel/helper-builder-binary-assignment-operator-visitor-7.14.5" = { name = "_at_babel_slash_helper-builder-binary-assignment-operator-visitor"; packageName = "@babel/helper-builder-binary-assignment-operator-visitor"; - version = "7.12.13"; + version = "7.14.5"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/helper-builder-binary-assignment-operator-visitor/-/helper-builder-binary-assignment-operator-visitor-7.12.13.tgz"; - sha512 = "CZOv9tGphhDRlVjVkAgm8Nhklm9RzSmWpX2my+t7Ua/KT616pEzXsQCjinzvkRvHWJ9itO4f296efroX23XCMA=="; + url = "https://registry.npmjs.org/@babel/helper-builder-binary-assignment-operator-visitor/-/helper-builder-binary-assignment-operator-visitor-7.14.5.tgz"; + sha512 = "YTA/Twn0vBXDVGJuAX6PwW7x5zQei1luDDo2Pl6q1qZ7hVNl0RZrhHCQG/ArGpR29Vl7ETiB8eJyrvpuRp300w=="; }; }; - "@babel/helper-compilation-targets-7.14.4" = { + "@babel/helper-compilation-targets-7.14.5" = { name = "_at_babel_slash_helper-compilation-targets"; packageName = "@babel/helper-compilation-targets"; - version = "7.14.4"; + version = "7.14.5"; src = fetchurl { - url = 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}; "@babel/plugin-proposal-object-rest-spread-7.10.4" = { @@ -760,58 +760,58 @@ let sha512 = "6vh4SqRuLLarjgeOf4EaROJAHjvu9Gl+/346PbDH9yWbJyfnJ/ah3jmYKYtswEyCoWZiidvVHjHshd4WgjB9BA=="; }; }; - "@babel/plugin-proposal-object-rest-spread-7.14.4" = { + "@babel/plugin-proposal-object-rest-spread-7.14.7" = { name = "_at_babel_slash_plugin-proposal-object-rest-spread"; packageName = "@babel/plugin-proposal-object-rest-spread"; - version = "7.14.4"; + version = "7.14.7"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/plugin-proposal-object-rest-spread/-/plugin-proposal-object-rest-spread-7.14.4.tgz"; - sha512 = "AYosOWBlyyXEagrPRfLJ1enStufsr7D1+ddpj8OLi9k7B6+NdZ0t/9V7Fh+wJ4g2Jol8z2JkgczYqtWrZd4vbA=="; + url = "https://registry.npmjs.org/@babel/plugin-proposal-object-rest-spread/-/plugin-proposal-object-rest-spread-7.14.7.tgz"; + sha512 = "082hsZz+sVabfmDWo1Oct1u1AgbKbUAyVgmX4otIc7bdsRgHBXwTwb3DpDmD4Eyyx6DNiuz5UAATT655k+kL5g=="; }; }; - 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name = "_at_grpc_slash_proto-loader"; packageName = "@grpc/proto-loader"; @@ -2524,24 +2515,6 @@ let sha512 = "DT14xgw3PSzPxwS13auTEwxhMMOoz33DPUKNtmYK/QYbBSpLXJy78FGGs5yVoxVobEqPm4iW9MOIoz0A3bLTRQ=="; }; }; - "@grpc/proto-loader-0.6.0" = { - name = "_at_grpc_slash_proto-loader"; - packageName = "@grpc/proto-loader"; - version = "0.6.0"; - src = fetchurl { - url = "https://registry.npmjs.org/@grpc/proto-loader/-/proto-loader-0.6.0.tgz"; - sha512 = "JwWZwGuN1nQuPdeL1d94hNGtnRtiOuy+SkdVUU8IwwQzksvdWvgKHyGDCesvAD0tndQTm1YUZHJw+JDTIDALyQ=="; - }; - }; - "@grpc/proto-loader-0.6.1" = { - name = "_at_grpc_slash_proto-loader"; - packageName = "@grpc/proto-loader"; - version = "0.6.1"; - src = fetchurl { - url = "https://registry.npmjs.org/@grpc/proto-loader/-/proto-loader-0.6.1.tgz"; - sha512 = "4DIvEOZhw5nGj3RQngIoiMXRsre3InEH136krZTcirs/G2em3WMXdtx4Lqlnb4E2ertbWGs5gPeVDKU5BHffXw=="; - }; - }; "@grpc/proto-loader-0.6.2" = { name = "_at_grpc_slash_proto-loader"; packageName = 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+ sha512 = "TIGJLjSDwy2j00+XGxTi7GaoqPOmDqmfhVsTCZK7C7JDfYzFQWzMixmEKSJkw3rWnFHA5q4omGeIWZP6DAkoGA=="; + }; + }; + "@joplin/turndown-plugin-gfm-1.0.31" = { name = "_at_joplin_slash_turndown-plugin-gfm"; packageName = "@joplin/turndown-plugin-gfm"; - version = "1.0.30"; + version = "1.0.31"; src = fetchurl { - url = "https://registry.npmjs.org/@joplin/turndown-plugin-gfm/-/turndown-plugin-gfm-1.0.30.tgz"; - sha512 = "81syBeLWxduhIM+gZSdM9OGOBL5XXFSMymwfWSFTzS8svYx/I95TPwq0oERcIz6rZkeqf6C9Q52iY30GvKEOog=="; + url = "https://registry.npmjs.org/@joplin/turndown-plugin-gfm/-/turndown-plugin-gfm-1.0.31.tgz"; + sha512 = "6PqxgmOIJ8CUR/aFno88JM2a0QTlFtz50ofTz8/hhD4jDD8qQ8DROy6yexCeZle4Gj45yLt8/WhmOlu32FkO/w=="; }; }; "@josephg/resolvable-1.0.1" = { @@ -3784,13 +3766,13 @@ let sha512 = "7AQsO0hMmpqDledV7AhBuSYqYPFsKP9PaltMecX9nlnsyFxqtsqUg9/pvB2L/jxvskrDrNkdKYz2KTbQznCtng=="; }; }; - "@mdn/browser-compat-data-3.2.4" = { + "@mdn/browser-compat-data-3.3.7" = { name = 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"https://registry.npmjs.org/@netlify/open-api/-/open-api-2.5.0.tgz"; + sha512 = "KiXfYPO/X24p7EYQjcjBTizoyfY3U8zPv68Rte0EtayW2ZSqIslLLpNNd2gteqdh0Q83mzSiESdhlQHd0Ckjjg=="; }; }; - "@netlify/plugin-edge-handlers-1.11.13" = { + "@netlify/plugin-edge-handlers-1.11.19" = { name = "_at_netlify_slash_plugin-edge-handlers"; packageName = "@netlify/plugin-edge-handlers"; - version = "1.11.13"; + version = "1.11.19"; src = fetchurl { - url = "https://registry.npmjs.org/@netlify/plugin-edge-handlers/-/plugin-edge-handlers-1.11.13.tgz"; - sha512 = "GPSg5bYlU2hgmt1MGx22+ZoXbPdnEiqkdj40hWxJjHuDIGqfvFa3nGup7BvHBNfd1uI+OVSlLXzabWl6aVjQIg=="; + url = "https://registry.npmjs.org/@netlify/plugin-edge-handlers/-/plugin-edge-handlers-1.11.19.tgz"; + sha512 = "SAsVNIxF0asduPXbsr3wbyAB7lPZQxhG90EeOu0/Fo+BLhpO4g+6eH13I60qJpWCI/ucXXqSrUw8y6Oy5wpY0g=="; }; }; - "@netlify/plugins-list-2.14.2" = { + "@netlify/plugins-list-2.18.0" = { name = "_at_netlify_slash_plugins-list"; packageName = "@netlify/plugins-list"; - version = "2.14.2"; + version = "2.18.0"; src = fetchurl { - url = "https://registry.npmjs.org/@netlify/plugins-list/-/plugins-list-2.14.2.tgz"; - sha512 = "WbLQ0X1cnryXzWeV03dA3BHw0CEPDTrj3IvjbeOB45A5/dxvTgQVjAeFbmqgRj6A8GPHgSLoNN0kteoXBojHhw=="; + url = "https://registry.npmjs.org/@netlify/plugins-list/-/plugins-list-2.18.0.tgz"; + sha512 = "lbI7P0CaSH23r2sF4z3DX02PqQ8ENUtRullQXEQXUareZfrXlOV6F8sl/LAWcgjE/kuh51eIAu/hWstsZFEQIQ=="; + }; + }; + "@netlify/routing-local-proxy-0.30.1" = { + name = "_at_netlify_slash_routing-local-proxy"; + packageName = "@netlify/routing-local-proxy"; + version = "0.30.1"; + src = fetchurl { + url = "https://registry.npmjs.org/@netlify/routing-local-proxy/-/routing-local-proxy-0.30.1.tgz"; + sha512 = "9IfNBXDJA2JLvHA5GRDTpOgPpU3dovL8ezB1+igxvtinnl4Nnl9G4D9N6leqf1ecC6aZrx9St4OATqVwY2LryQ=="; }; }; "@netlify/run-utils-1.0.7" = { @@ -3982,49 +4000,22 @@ let sha512 = "YFi1Sf+ktQICS3tAKu7/uiGzLXgi8RNVwH9naUkziXwXQNH2oxDhKgy0/Zv5Nw0zMDJyKWrJ3xObWEC57mJ/KA=="; }; }; - "@netlify/traffic-mesh-agent-0.27.10" = { - name = "_at_netlify_slash_traffic-mesh-agent"; - packageName = "@netlify/traffic-mesh-agent"; - version = "0.27.10"; - src = fetchurl { - url = "https://registry.npmjs.org/@netlify/traffic-mesh-agent/-/traffic-mesh-agent-0.27.10.tgz"; - sha512 = "HZXEdIXzg8CpysYRDVXkBpmjOj/C8Zb8Q/qkkt9x+npJ56HeX6sXAE4vK4SMCRLkkbQ2VyYTaDKg++GefeB2Gg=="; - }; - }; - "@netlify/traffic-mesh-agent-darwin-x64-0.27.10" = { - name = "_at_netlify_slash_traffic-mesh-agent-darwin-x64"; - packageName = "@netlify/traffic-mesh-agent-darwin-x64"; - version = "0.27.10"; - src = fetchurl { - url = "https://registry.npmjs.org/@netlify/traffic-mesh-agent-darwin-x64/-/traffic-mesh-agent-darwin-x64-0.27.10.tgz"; - sha512 = "j2blCh3TKNV35VPF9Zf/LM3v6pH/gz/Y7uu/78RLbgNvCW0vGN7b1GgFnXQKwrvbL6tRGumJS2P5PWUfEsKOBA=="; - }; - }; - "@netlify/traffic-mesh-agent-linux-x64-0.27.10" = { - name = "_at_netlify_slash_traffic-mesh-agent-linux-x64"; - packageName = 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= "https://registry.npmjs.org/@netlify/zip-it-and-ship-it/-/zip-it-and-ship-it-4.2.5.tgz"; - sha512 = "2ncCQEs49I8Ir30w2T3E1yogJp9cw+X8vfvL9a8i1AA0VE51F2rfhNsLbceWrEWn2T3TgogOMQP/0Qsxw2v0Tg=="; + url = "https://registry.npmjs.org/@netlify/zip-it-and-ship-it/-/zip-it-and-ship-it-4.4.2.tgz"; + sha512 = "627ZNqfc4mdhU5mYDpcKUbmx8RoAUu8ZQiW/RIt5s7uDhruba3bK776Ygzog5b14hYWthT41/bf+9wQ+O9NFWw=="; + }; + }; + "@netlify/zip-it-and-ship-it-4.5.1" = { + name = "_at_netlify_slash_zip-it-and-ship-it"; + packageName = "@netlify/zip-it-and-ship-it"; + version = "4.5.1"; + src = fetchurl { + url = "https://registry.npmjs.org/@netlify/zip-it-and-ship-it/-/zip-it-and-ship-it-4.5.1.tgz"; + sha512 = "zU2ztAEwLxIL7oy1nl0NXZC9Mbzb2QVkdjztZcpY76Ne5q0hBYpBv85SJFgrz75QMSC5C/eeQxs8iUYpmdZH4Q=="; }; }; "@node-red/editor-api-1.3.5" = { @@ -4081,13 +4072,13 @@ let sha512 = "1TTvTwvGMSe9SQMEKN5zGdyGMv8Kth49eiUcdPnUWigtafk1BE9iP7gVSyLVYgijzCwh40GUkSYey0TUaSbRBw=="; }; }; - "@nodelib/fs.scandir-2.1.4" = { + 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"2.6.3"; src = fetchurl { - url = "https://registry.npmjs.org/@npmcli/arborist/-/arborist-2.6.1.tgz"; - sha512 = "OOlntFIOAo7RplEQaYXlA5U5NXE+EwZtnTCsit4Wtme5+llGiea6GBytuV8dOzdPMPlNx3fQQjBUE9E8k76yjQ=="; + url = "https://registry.npmjs.org/@npmcli/arborist/-/arborist-2.6.3.tgz"; + sha512 = "R8U2dZ8+jeE7go+qNU4Mt6aiXyBu3mM75iRIugNCA4P0OWlsLOpuDPPhsaRcOVbtXheOGZXrqe36qP1g+M68KQ=="; }; }; "@npmcli/ci-detect-1.3.0" = { @@ -4135,13 +4126,13 @@ let sha512 = "oN3y7FAROHhrAt7Rr7PnTSwrHrZVRTS2ZbyxeQwSSYD0ifwM3YNgQqbaRmjcWoPyq77MjchusjJDspbzMmip1Q=="; }; }; - "@npmcli/git-2.0.9" = { + "@npmcli/git-2.1.0" = { name = "_at_npmcli_slash_git"; packageName = "@npmcli/git"; - version = "2.0.9"; + version = "2.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/@npmcli/git/-/git-2.0.9.tgz"; - sha512 = "hTMbMryvOqGLwnmMBKs5usbPsJtyEsMsgXwJbmNrsEuQQh1LAIMDU77IoOrwkCg+NgQWl+ySlarJASwM3SutCA=="; + url = "https://registry.npmjs.org/@npmcli/git/-/git-2.1.0.tgz"; + sha512 = 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fetchurl { - url = "https://registry.npmjs.org/@octokit/endpoint/-/endpoint-6.0.11.tgz"; - sha512 = "fUIPpx+pZyoLW4GCs3yMnlj2LfoXTWDUVPTC4V3MUEKZm48W+XYpeWSZCv+vYF1ZABUm2CqnDVf1sFtIYrj7KQ=="; + url = "https://registry.npmjs.org/@octokit/endpoint/-/endpoint-6.0.12.tgz"; + sha512 = "lF3puPwkQWGfkMClXb4k/eUT/nZKQfxinRWJrdZaJO85Dqwo/G0yOC434Jr2ojwafWJMYqFGFa5ms4jJUgujdA=="; }; }; - "@octokit/graphql-4.6.2" = { + "@octokit/graphql-4.6.4" = { name = "_at_octokit_slash_graphql"; packageName = "@octokit/graphql"; - version = "4.6.2"; + version = "4.6.4"; src = fetchurl { - url = "https://registry.npmjs.org/@octokit/graphql/-/graphql-4.6.2.tgz"; - sha512 = "WmsIR1OzOr/3IqfG9JIczI8gMJUMzzyx5j0XXQ4YihHtKlQc+u35VpVoOXhlKAlaBntvry1WpAzPl/a+s3n89Q=="; + url = "https://registry.npmjs.org/@octokit/graphql/-/graphql-4.6.4.tgz"; + sha512 = "SWTdXsVheRmlotWNjKzPOb6Js6tjSqA2a8z9+glDJng0Aqjzti8MEWOtuT8ZSu6wHnci7LZNuarE87+WJBG4vg=="; }; }; - "@octokit/openapi-types-7.2.3" = { + 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= "_at_snyk_slash_fix-poetry"; + packageName = "@snyk/fix-poetry"; + version = "0.7.2"; + src = fetchurl { + url = "https://registry.npmjs.org/@snyk/fix-poetry/-/fix-poetry-0.7.2.tgz"; + sha512 = "abBdeOb326exreUDnCkELw9GVOR7qdUQmX0sKyE1baz3i9WaWI5Wy0bWHqjw9oGE5ZP8Ki/xtzkHU2W57D++Zg=="; }; }; "@snyk/gemfile-1.2.0" = { @@ -6223,13 +6232,13 @@ let sha512 = "W24e3Ycz1UZPgr1ZEDHlK4XnvOr+CpJH3qNsFeqXwwlW/9END9gxn3oJSsp7gYdiQxrXUHwUUd3xuzVz37MrZQ=="; }; }; - "@types/download-6.2.4" = { + "@types/download-8.0.0" = { name = "_at_types_slash_download"; packageName = "@types/download"; - version = "6.2.4"; + version = "8.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/@types/download/-/download-6.2.4.tgz"; - sha512 = "Lo5dy3ai6LNnbL663sgdzqL1eib11u1yKH6w3v3IXEOO4kRfQpMn1qWUTaumcHLACjFp1RcBx9tUXEvJoR3vcA=="; + url = "https://registry.npmjs.org/@types/download/-/download-8.0.0.tgz"; + sha512 = "0/LRe3VzcyFIRto6YiJH9OG05ASLeypv5BVrlWjWRBSLCeyFb4up4hqO27j98ASzx1fU2V3ftuWR/sy3PM4NPA=="; }; }; "@types/duplexify-3.6.0" = { @@ -6268,13 +6277,13 @@ let sha512 = "DLVpLEGTEZGBXOYoYoagHSxXkDHONc0fZouF2ayw7Q18aRu1Afwci+1CFKvPpouCUOVWP+dmCaAWpQjswe7kpg=="; }; }; - "@types/eslint-7.2.12" = { + "@types/eslint-7.2.13" = { name = "_at_types_slash_eslint"; packageName = "@types/eslint"; - version = "7.2.12"; + version = "7.2.13"; src = fetchurl { - url = "https://registry.npmjs.org/@types/eslint/-/eslint-7.2.12.tgz"; - sha512 = "HjikV/jX6e0Pg4DcB+rtOBKSrG6w5IaxWpmi3efL/eLxMz5lZTK+W1DKERrX5a+mNzL78axfsDNXu7JHFP4uLg=="; + url = "https://registry.npmjs.org/@types/eslint/-/eslint-7.2.13.tgz"; + sha512 = "LKmQCWAlnVHvvXq4oasNUMTJJb2GwSyTY8+1C7OH5ILR8mPLaljv1jxL1bXW3xB3jFbQxTKxJAvI8PyjB09aBg=="; }; }; "@types/eslint-scope-3.7.0" = { @@ -6322,6 +6331,15 @@ let sha512 = "c5ciR06jK8u9BstrmJyO97m+klJrrhCf9u3rLu3DEAJBirxRqSCvDQoYKmxuYwQI5SZChAWu+tq9oVlGRuzPAg=="; }; }; + "@types/estree-0.0.48" = { + name = "_at_types_slash_estree"; + packageName = "@types/estree"; + version = "0.0.48"; + src = 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"acorn-globals-1.0.9" = { @@ -8689,22 +8662,22 @@ let sha1 = "6a7990437ca736d5e1288db92bd3266d5f5cb2aa"; }; }; - "addons-linter-3.2.0" = { + "addons-linter-3.8.0" = { name = "addons-linter"; packageName = "addons-linter"; - version = "3.2.0"; + version = "3.8.0"; src = fetchurl { - url = "https://registry.npmjs.org/addons-linter/-/addons-linter-3.2.0.tgz"; - sha512 = "b6oViLOBgXWsld5L3DJiJSt77DYjVrk2Yam2/gD5e2bsj5xfNvavugwhlJP/MIF0j5yetYT/XFQDXY1Hs0flOA=="; + url = "https://registry.npmjs.org/addons-linter/-/addons-linter-3.8.0.tgz"; + sha512 = "k2s7PS7Oiq9NZnpf1SjG6hyefMC082a91BhSw30QEUgvDT54E2d6j8wfbar1WEigc9uYZgGv3VfzEeqTgoLUpw=="; }; }; - "addons-scanner-utils-4.4.0" = { + "addons-scanner-utils-4.8.0" = { name = "addons-scanner-utils"; packageName = "addons-scanner-utils"; - version = "4.4.0"; + version = "4.8.0"; src = fetchurl { - url = "https://registry.npmjs.org/addons-scanner-utils/-/addons-scanner-utils-4.4.0.tgz"; - sha512 = 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"asynckit-0.4.0" = { @@ -10894,22 +10849,22 @@ let sha1 = "00f35b2d27ac91b1f0d3ef2084c98cf1d1f0adc3"; }; }; - "aws-sdk-2.784.0" = { + "aws-sdk-2.920.0" = { name = "aws-sdk"; packageName = "aws-sdk"; - version = "2.784.0"; + version = "2.920.0"; src = fetchurl { - url = "https://registry.npmjs.org/aws-sdk/-/aws-sdk-2.784.0.tgz"; - sha512 = "+KBkqH7t/XE91Fqn8eyJeNIWsnhSWL8bSUqFD7TfE3FN07MTlC0nprGYp+2WfcYNz5i8Bus1vY2DHNVhtTImnw=="; + url = "https://registry.npmjs.org/aws-sdk/-/aws-sdk-2.920.0.tgz"; + sha512 = "tbMZ/Y2rRo6R6TTBODJXTiil+MXaoT6Qzotws3yvI1IWGpYxKo7N/3L06XB8ul8tCG0TigxIOY70SMICM70Ppg=="; }; }; - "aws-sdk-2.918.0" = { + "aws-sdk-2.932.0" = { name = "aws-sdk"; packageName = "aws-sdk"; - version = "2.918.0"; + version = "2.932.0"; src = fetchurl { - url = "https://registry.npmjs.org/aws-sdk/-/aws-sdk-2.918.0.tgz"; - sha512 = "ZjWanOA1Zo664EyWLCnbUlkwCjoRPmSIMx529W4gk1418qo3oCEcvUy1HeibGGIClYnZZ7J4FMQvVDm2+JtHLQ=="; + url = "https://registry.npmjs.org/aws-sdk/-/aws-sdk-2.932.0.tgz"; + sha512 = "U6MWUtFD0npWa+ReVEgm0fCIM0fMOYahFp14GLv8fC+BWOTvh5Iwt/gF8NrLomx42bBjA1Abaw6yhmiaSJDQHQ=="; }; }; "aws-sign2-0.6.0" = { @@ -11272,13 +11227,13 @@ let sha512 = "kISrENsJ0z5dNPq5eRvcctITNHYXWOA4DUZRFYCz3jYCcvTb/A546LIddmoGNMVYg2U38OyFeNosQwI9ENTqIQ=="; }; }; - "babel-plugin-polyfill-corejs3-0.2.2" = { + "babel-plugin-polyfill-corejs3-0.2.3" = { name = "babel-plugin-polyfill-corejs3"; packageName = "babel-plugin-polyfill-corejs3"; - version = "0.2.2"; + version = "0.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/babel-plugin-polyfill-corejs3/-/babel-plugin-polyfill-corejs3-0.2.2.tgz"; - sha512 = "l1Cf8PKk12eEk5QP/NQ6TH8A1pee6wWDJ96WjxrMXFLHLOBFzYM4moG80HFgduVhTqAFez4alnZKEhP/bYHg0A=="; + url = "https://registry.npmjs.org/babel-plugin-polyfill-corejs3/-/babel-plugin-polyfill-corejs3-0.2.3.tgz"; + sha512 = "rCOFzEIJpJEAU14XCcV/erIf/wZQMmMT5l5vXOpL5uoznyOGfDIjPj6FVytMvtzaKSTSVKouOCTPJ5OMUZH30g=="; }; }; "babel-plugin-polyfill-regenerator-0.2.2" = { @@ -11947,13 +11902,13 @@ let sha1 = "e6d5ea8c5dad001304a70b22638447f69cb2f809"; }; }; - "before-after-hook-2.2.1" = { + "before-after-hook-2.2.2" = { name = "before-after-hook"; packageName = "before-after-hook"; - version = "2.2.1"; + version = "2.2.2"; src = fetchurl { - url = "https://registry.npmjs.org/before-after-hook/-/before-after-hook-2.2.1.tgz"; - sha512 = "/6FKxSTWoJdbsLDF8tdIjaRiFXiE6UHsEHE3OPI/cwPURCVi1ukP0gmLn7XWEiFk5TcwQjjY5PWsU+j+tgXgmw=="; + url = "https://registry.npmjs.org/before-after-hook/-/before-after-hook-2.2.2.tgz"; + sha512 = "3pZEU3NT5BFUo/AD5ERPWOgQOCZITni6iavr5AUw5AUwQjMlI0kzu5btnyD39AF0gUEsDPwJT+oY1ORBJijPjQ=="; }; }; "bencode-0.7.0" = { @@ -11992,6 +11947,15 @@ let sha512 = "2uhEl8FdjSBUyb69qDTgOEeeqDTa+n3yMQzLW0cOzNf1Ow5bwcg3idf+qsWisIKRH8Bk8oC7UXL8irRcPA8ZEQ=="; }; }; + "bent-7.3.12" = { + name = "bent"; + packageName = "bent"; + version = "7.3.12"; + src = fetchurl { + url = "https://registry.npmjs.org/bent/-/bent-7.3.12.tgz"; + sha512 = "T3yrKnVGB63zRuoco/7Ybl7BwwGZR0lceoVG5XmQyMIH9s19SV5m+a8qam4if0zQuAmOQTyPTPmsQBdAorGK3w=="; + }; + }; "bep53-range-1.1.0" = { name = "bep53-range"; packageName = "bep53-range"; @@ -12010,15 +11974,6 @@ let sha512 = "Al3nHGQGqDYqqinXhQzmwmcRToe/3WyBv4N8aZc5Pef8xw2neZlR9VPi84Sa23JtgWcucu18HxVZrnI0fn2etw=="; }; }; - "better-ajv-errors-0.6.7" = { - name = "better-ajv-errors"; - packageName = "better-ajv-errors"; - version = "0.6.7"; - src = fetchurl { - url = "https://registry.npmjs.org/better-ajv-errors/-/better-ajv-errors-0.6.7.tgz"; - sha512 = "PYgt/sCzR4aGpyNy5+ViSQ77ognMnWq7745zM+/flYO4/Yisdtp9wDQW2IKCyVYPUxQt3E/b5GBSwfhd1LPdlg=="; - }; - }; "better-assert-1.0.2" = { name = "better-assert"; packageName = "better-assert"; @@ -12361,13 +12316,13 @@ let sha512 = "SrLwMzrpETJDiH9z12EMcqtApgcQo9XsPi+S9Aodezu53ALcGjBBQ7+C+IWbsSCBlSvNEec8sqfh3itO/j/QUw=="; }; }; - "bit-field-1.3.6" = { + "bit-field-1.5.1" = { name = "bit-field"; packageName = "bit-field"; - version = "1.3.6"; + version = "1.5.1"; src = fetchurl { - url = "https://registry.npmjs.org/bit-field/-/bit-field-1.3.6.tgz"; - sha512 = "gu+wXJ+saekzja7tSRygoR+M+C88U0IoVTdp0SmZj5tyDwSkWmZNhSUkBmHx2NNZcSAB0gu9g8yBd1Kn7ECVmw=="; + url = "https://registry.npmjs.org/bit-field/-/bit-field-1.5.1.tgz"; + sha512 = "yDanqg5y7PNCzyYl2IPJayOuMt3HRKI8vJDlntSxIqLoKy9YTYUoABUAEuFbQrkzHoAIGfmhhv0M6VRIZ+F0xw=="; }; }; "bitcoin-core-2.3.0" = { @@ -12469,13 +12424,13 @@ let sha512 = "tSh9HdQgwyEAfo1jzoGEis6o/zs4CcdRTchG93XVl5jct+DCAN90M5MVUV76k2vJ9Xg3GAzLB5NLsY/vnVTh6w=="; }; }; - "bittorrent-protocol-3.3.1" = { + "bittorrent-protocol-3.4.1" = { name = "bittorrent-protocol"; packageName = "bittorrent-protocol"; - version = "3.3.1"; + version = "3.4.1"; src = fetchurl { - url = "https://registry.npmjs.org/bittorrent-protocol/-/bittorrent-protocol-3.3.1.tgz"; - sha512 = "DJy0/jjqJD62PPJY79duCccmPMihp3KPowlmd7BLEU8FTtnDsYjso6BAx+pWwCKOeDORdc9RiJ7L72x3taCh6g=="; + url = "https://registry.npmjs.org/bittorrent-protocol/-/bittorrent-protocol-3.4.1.tgz"; + sha512 = "3qBW4ZZrUZKN7HzHbX4+kbiphrTNeraMp3i9n3wobicysjibAV8SBDY+sGiBN4SgXV6WvEW4kyRPIjoSqW+khw=="; }; }; "bittorrent-tracker-7.7.0" = { @@ -12487,13 +12442,13 @@ let sha1 = "ffd2eabc141d36ed5c1817df7e992f91fd7fc65c"; }; }; - "bittorrent-tracker-9.17.0" = { + "bittorrent-tracker-9.17.2" = { name = "bittorrent-tracker"; packageName = "bittorrent-tracker"; - version = "9.17.0"; + version = "9.17.2"; src = fetchurl { - url = "https://registry.npmjs.org/bittorrent-tracker/-/bittorrent-tracker-9.17.0.tgz"; - sha512 = "ErpOx8AAUW8eLwxnEHp15vs0LDJECLADHISEBM+HXclG3J2/9kMBJ31IjwlB8kUNigknSwm8odAThjJEeyL1yA=="; + url = "https://registry.npmjs.org/bittorrent-tracker/-/bittorrent-tracker-9.17.2.tgz"; + sha512 = "hXjed0OnB16da+ScJUZnrAZbf9gMgSLKqh5rJebtYnTRgN4o1mX0DOPH3Nf5RFCs935ibhSmZN5nwbkh+3MdEA=="; }; }; "bl-1.2.3" = { @@ -12559,13 +12514,13 @@ let sha1 = "825a8fc536a5dc43193467f3124f7e9b78b21cef"; }; }; - "blakejs-1.1.0" = { + "blakejs-1.1.1" = { name = "blakejs"; packageName = "blakejs"; - version = "1.1.0"; + version = "1.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/blakejs/-/blakejs-1.1.0.tgz"; - sha1 = "69df92ef953aa88ca51a32df6ab1c54a155fc7a5"; + url = "https://registry.npmjs.org/blakejs/-/blakejs-1.1.1.tgz"; + sha512 = "bLG6PHOCZJKNshTjGRBvET0vTciwQE6zFKOKKXPDJfwFBd4Ac0yBfPZqcGvGJap50l7ktvlpFqc2jGVaUgbJgg=="; }; }; "blessed-0.1.81" = { @@ -12577,13 +12532,13 @@ let sha1 = "f962d687ec2c369570ae71af843256e6d0ca1129"; }; }; - "blessed-contrib-4.8.21" = { + "blessed-contrib-4.9.0" = { name = "blessed-contrib"; packageName = "blessed-contrib"; - version = "4.8.21"; + version = "4.9.0"; src = fetchurl { - url = "https://registry.npmjs.org/blessed-contrib/-/blessed-contrib-4.8.21.tgz"; - sha512 = "zdQMO3UyfhdG0S+Zqn7YexI6BHlnO26qxBKc9jzgyZdIoq7nELiGM/V89CvrTPblZGQr3eMUqCy7pxlKm3vCYA=="; + url = "https://registry.npmjs.org/blessed-contrib/-/blessed-contrib-4.9.0.tgz"; + sha512 = "lqvb+6WeqMh7AO8zudSDnvKPGqzkmxqMAwpv83qzeL35MfmROkmjwnY3pi5dvgxfwg5i1UJnDMpj8OroCqpAPw=="; }; }; "blgr-0.1.8" = { @@ -12829,22 +12784,22 @@ let sha512 = "dhEPs72UPbDnAQJ9ZKMNTP6ptJaionhP5cBb541nXPlW60Jepo9RV/a4fX4XWW9CuFNK22krhrj1+rgzifNCsw=="; }; }; - "bolt01-1.2.1" = { + "bolt01-1.2.2" = { name = "bolt01"; packageName = "bolt01"; - version = "1.2.1"; + version = "1.2.2"; src = fetchurl { - url = "https://registry.npmjs.org/bolt01/-/bolt01-1.2.1.tgz"; - sha512 = "Mpk1QZofLqrJ1Sjm1vA1HKov6+ffOhCUTP5ae8UTK+U7IwbGSQTfQWu1m6waoSmUN7esQDAS2gBE6PiVaHK0ww=="; + url = "https://registry.npmjs.org/bolt01/-/bolt01-1.2.2.tgz"; + sha512 = "IH3j1UF+XewQ8ngHW4HVPF9E1GS8R0fGtnvfCVkTTcLYBQOQrP9kvSxS8Wz4HFfjCR34Ep0fIibF69LVnHbbxQ=="; }; }; - "bolt03-1.2.9" = { + "bolt03-1.2.10" = { name = "bolt03"; packageName = "bolt03"; - version = "1.2.9"; + version = "1.2.10"; src = fetchurl { - url = "https://registry.npmjs.org/bolt03/-/bolt03-1.2.9.tgz"; - sha512 = 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"xFfW/ix6qSzBVGGt3jgpG/SX1LgVvGUYxA/0yC6uaPAjgqbdqmbDZzNEqMRps7Z8Vp1H3yfO5JXQuX54n/GzZg=="; }; }; - "bolt09-0.1.4" = { + "bolt09-0.1.5" = { name = "bolt09"; packageName = "bolt09"; - version = "0.1.4"; + version = "0.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/bolt09/-/bolt09-0.1.4.tgz"; - sha512 = "I8GZoVvQDF7w/93XNbUD29hBoN+kiPomPb8X/D6510pjRI5/KgZ0nITH4BAymS89GTGPjI5ZavkFw3vxxRhjQQ=="; + url = "https://registry.npmjs.org/bolt09/-/bolt09-0.1.5.tgz"; + sha512 = "oT1+erg21vat55oXNd7nNEkCO0FQnmaraFZuyXFyeVk7dZCm/3vgic0qK1VuUSV+ksYXJfRKYC4AqfYrtHNPZg=="; }; }; "bonjour-3.5.0" = { @@ -12901,13 +12856,13 @@ let sha1 = "68dff5fbe60c51eb37725ea9e3ed310dcc1e776e"; }; }; - "boolean-3.1.0" = { + "boolean-3.1.2" = { name = "boolean"; packageName = "boolean"; - version = "3.1.0"; + version = "3.1.2"; src = fetchurl { - url = "https://registry.npmjs.org/boolean/-/boolean-3.1.0.tgz"; - sha512 = "K6r5tvO1ykeYerI7jIyTvSFw2l6D6DzqkljGj2E2uyYAAdDo2SV4qGJIV75cHIQpTFyb6BB0BEHiDdDrFsNI+g=="; + url = "https://registry.npmjs.org/boolean/-/boolean-3.1.2.tgz"; + sha512 = "YN6UmV0FfLlBVvRvNPx3pz5W/mUoYB24J4WSXOKP/OOJpi+Oq6WYqPaNTHzjI0QzwWtnvEd5CGYyQPgp1jFxnw=="; }; }; "boom-2.10.1" = { @@ -13243,6 +13198,15 @@ let sha512 = "TkOR1cQGdmXU9zW4YukWzWVSJwrxmNdADFbqbE3HFgQWe5wqZmOawqZ7J/8MPCwk/W8yY7Y0h+7mOtcZxLP23g=="; }; }; + "browserify-17.0.0" = { + name = "browserify"; + packageName = "browserify"; + version = "17.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/browserify/-/browserify-17.0.0.tgz"; + sha512 = "SaHqzhku9v/j6XsQMRxPyBrSP3gnwmE27gLJYZgMT2GeK3J0+0toN+MnuNYDfHwVGQfLiMZ7KSNSIXHemy905w=="; + }; + }; "browserify-aes-1.2.0" = { name = "browserify-aes"; packageName = "browserify-aes"; @@ -13711,6 +13675,15 @@ let sha1 = "26e61ed1422fb70dd42e6e36729ed51d855fe8d9"; }; }; + "buffer-xor-2.0.2" = { + name = "buffer-xor"; + packageName = "buffer-xor"; + version = "2.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/buffer-xor/-/buffer-xor-2.0.2.tgz"; + sha512 = "eHslX0bin3GB+Lx2p7lEYRShRewuNZL3fUl4qlVJGGiwoPGftmt8JQgk2Y9Ji5/01TnVDo33E5b5O3vUB1HdqQ=="; + }; + }; "buffermaker-1.2.1" = { name = "buffermaker"; packageName = "buffermaker"; @@ -13990,6 +13963,15 @@ let sha512 = "zauLjrfCG+xvoyaqLoV8bLVXXNGC4JqlxFCutSDWA6fJrTo2ZuvLYTqZ7aHBLZSMOopbzwv8f+wZcVzfVTI2Dg=="; }; }; + "bytesish-0.4.4" = { + name = "bytesish"; + packageName = "bytesish"; + version = "0.4.4"; + src = fetchurl { + url = "https://registry.npmjs.org/bytesish/-/bytesish-0.4.4.tgz"; + sha512 = "i4uu6M4zuMUiyfZN4RU2+i9+peJh//pXhd9x1oSe1LBkZ3LEbCoygu8W0bXTukU1Jme2txKuotpCZRaC3FLxcQ=="; + }; + }; "cacache-12.0.4" = { name = "cacache"; packageName = "cacache"; @@ -14062,13 +14044,13 @@ let sha512 = "Oj3cAGPCqOZX7Rz64Uny2GYAZNliQSqfbePrgAQ1wKAihYmCUnraBtJtKcGR4xz7wF+LoJC+ssFZvv5BgF9Igg=="; }; }; - "cacheable-request-7.0.1" = { + "cacheable-request-7.0.2" = { name = "cacheable-request"; packageName = "cacheable-request"; - version = "7.0.1"; + version = "7.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/cacheable-request/-/cacheable-request-7.0.1.tgz"; - sha512 = "lt0mJ6YAnsrBErpTMWeu5kl/tg9xMAWjavYTN6VQXM1A/teBITuNcccXsCxF0tDQQJf9DfAaX5O4e0zp0KlfZw=="; + url = "https://registry.npmjs.org/cacheable-request/-/cacheable-request-7.0.2.tgz"; + sha512 = "pouW8/FmiPQbuGpkXQ9BAPv/Mo5xDGANgSNXzTzJ8DrKGuXOssM4wIQRjfanNRh3Yu5cfYPvcorqbhg2KIJtew=="; }; }; "cached-path-relative-1.0.2" = { @@ -14314,13 +14296,13 @@ let sha512 = "bsTwuIg/BZZK/vreVTYYbSWoe2F+71P7K5QGEX+pT250DZbfU1MQ5prOKpPR+LL6uWKK3KMwMCAS74QB3Um1uw=="; }; }; - "caniuse-lite-1.0.30001232" = { + "caniuse-lite-1.0.30001239" = { name = "caniuse-lite"; packageName = "caniuse-lite"; - version = "1.0.30001232"; + version = "1.0.30001239"; src = fetchurl { - url = "https://registry.npmjs.org/caniuse-lite/-/caniuse-lite-1.0.30001232.tgz"; - sha512 = "e4Gyp7P8vqC2qV2iHA+cJNf/yqUKOShXQOJHQt81OHxlIZl/j/j3soEA0adAQi8CPUQgvOdDENyQ5kd6a6mNSg=="; + url = "https://registry.npmjs.org/caniuse-lite/-/caniuse-lite-1.0.30001239.tgz"; + sha512 = "cyBkXJDMeI4wthy8xJ2FvDU6+0dtcZSJW3voUF8+e9f1bBeuvyZfc3PNbkOETyhbR+dGCPzn9E7MA3iwzusOhQ=="; }; }; "canvas-2.8.0" = { @@ -14476,22 +14458,31 @@ let sha512 = "vlNK021QdI7PNeiUh/lKkC/mNHHfV0m/Ad5JoI0TYtlBnJAslM/JIkm/tGC88bkLIwO6OQ5uV6ztS6kVAtCDlg=="; }; }; - "cdk8s-1.0.0-beta.14" = { + "cdk8s-1.0.0-beta.24" = { name = "cdk8s"; packageName = "cdk8s"; - version = "1.0.0-beta.14"; + version = "1.0.0-beta.24"; src = fetchurl { - url = "https://registry.npmjs.org/cdk8s/-/cdk8s-1.0.0-beta.14.tgz"; - sha512 = "NU5mZbOE3RgRX7a9zHf4AgiNcI/clqQ9vw/YixSgVe2AOiAsUXuSH2BCc3eFAZSlPSQYLxWG6mSCGY/06cy5Hw=="; + url = "https://registry.npmjs.org/cdk8s/-/cdk8s-1.0.0-beta.24.tgz"; + sha512 = "1aezBDPxwYvVd0/k5ts2UsgB6/NrvRNUksbZxbzZK1+thHl2iOLNYjnFMEOb64m6z3LrR0QMmAE4SLrXzbyMcQ=="; }; }; - "cdktf-0.4.0" = { + "cdk8s-plus-17-1.0.0-beta.30" = { + name = "cdk8s-plus-17"; + packageName = "cdk8s-plus-17"; + version = "1.0.0-beta.30"; + src = fetchurl { + url = "https://registry.npmjs.org/cdk8s-plus-17/-/cdk8s-plus-17-1.0.0-beta.30.tgz"; + sha512 = "e2xfSVsbwUPz+Zv5UycVKRgIcoca7ND00ov57iIsxRkc0yJ7rbILTxtrFoJ0fkEccgDVCDSoC6KfKkKh9Xzhqw=="; + }; + }; + "cdktf-0.4.1" = { name = "cdktf"; packageName = "cdktf"; - version = "0.4.0"; + version = "0.4.1"; src = fetchurl { - url = "https://registry.npmjs.org/cdktf/-/cdktf-0.4.0.tgz"; - sha512 = "P6KRqGokkAVRZdT2+fXfEdQszpOXrJa/EuNZr0WPcIrfTVfjL6HNrHyuP1HWUvJRzlcbG5ZZ3+8Uk4oFS9IXvA=="; + url = "https://registry.npmjs.org/cdktf/-/cdktf-0.4.1.tgz"; + sha512 = "U5aap+QH+w/0ibeFRYm8T/JtaA8AkjCkQ6c60eL/5hY0K0qi8rjEBpQcEho9KljqZvWap6mD2yD+JqunbLzRGA=="; }; }; "center-align-0.1.3" = { @@ -14827,6 +14818,15 @@ let sha1 = "a9baa860a3f9b595a6b81b1a86873121ed3a269e"; }; }; + "cheerio-1.0.0-rc.10" = { + name = "cheerio"; + packageName = "cheerio"; + version = "1.0.0-rc.10"; + src = fetchurl { + url = "https://registry.npmjs.org/cheerio/-/cheerio-1.0.0-rc.10.tgz"; + sha512 = "g0J0q/O6mW8z5zxQ3A8E8J1hUgp4SMOvEoW/x84OwyHKe/Zccz83PVT4y5Crcr530FV6NgmKI1qvGTKVl9XXVw=="; + }; + }; "cheerio-1.0.0-rc.3" = { name = "cheerio"; packageName = "cheerio"; @@ -14845,31 +14845,13 @@ let sha512 = "yoqps/VCaZgN4pfXtenwHROTp8NG6/Hlt4Jpz2FEP0ZJQ+ZUkVDd0hAPDNKhj3nakpfPt/CNs57yEtxD1bXQiw=="; }; }; - "cheerio-1.0.0-rc.6" = { - name = "cheerio"; - packageName = "cheerio"; - version = "1.0.0-rc.6"; - src = fetchurl { - url = "https://registry.npmjs.org/cheerio/-/cheerio-1.0.0-rc.6.tgz"; - sha512 = "hjx1XE1M/D5pAtMgvWwE21QClmAEeGHOIDfycgmndisdNgI6PE1cGRQkMGBcsbUbmEQyWu5PJLUcAOjtQS8DWw=="; - }; - }; - "cheerio-1.0.0-rc.9" = { - name = "cheerio"; - packageName = "cheerio"; - version = "1.0.0-rc.9"; - src = fetchurl { - url = "https://registry.npmjs.org/cheerio/-/cheerio-1.0.0-rc.9.tgz"; - sha512 = "QF6XVdrLONO6DXRF5iaolY+odmhj2CLj+xzNod7INPWMi/x9X4SOylH0S/vaPpX+AUU6t04s34SQNh7DbkuCng=="; - }; - }; - "cheerio-select-1.4.0" = { + "cheerio-select-1.5.0" = { name = "cheerio-select"; packageName = "cheerio-select"; - version = "1.4.0"; + version = "1.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/cheerio-select/-/cheerio-select-1.4.0.tgz"; - sha512 = "sobR3Yqz27L553Qa7cK6rtJlMDbiKPdNywtR95Sj/YgfpLfy0u6CGJuaBKe5YE/vTc23SCRKxWSdlon/w6I/Ew=="; + url = "https://registry.npmjs.org/cheerio-select/-/cheerio-select-1.5.0.tgz"; + sha512 = "qocaHPv5ypefh6YNxvnbABM07KMxExbtbfuJoIie3iZXX1ERwYmJcIiRrr9H05ucQP1k28dav8rpdDgjQd8drg=="; }; }; "cheerio-select-tmp-0.1.1" = { @@ -14899,15 +14881,6 @@ let sha512 = "0UQ55f51JBkOFa+fvR76ywRzxiPwQS3Xe8oe5bZRphpv+dIMeerW5Zn5e4cUy4COJwVtJyU0R79RMnw+aCqmGA=="; }; }; - "child_process-1.0.2" = { - name = "child_process"; - packageName = "child_process"; - version = "1.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/child_process/-/child_process-1.0.2.tgz"; - sha1 = "b1f7e7fc73d25e7fd1d455adc94e143830182b5a"; - }; - }; "chloride-2.4.1" = { name = "chloride"; packageName = "chloride"; @@ -14953,15 +14926,6 @@ let sha512 = "c4PR2egjNjI1um6bamCQ6bUNPDiyofNQruHvKgHQ4gDUP/ITSVSzNsiI5OWtHOsX323i5ha/kk4YmOZ1Ktg7KA=="; }; }; - "chokidar-3.3.0" = { - name = "chokidar"; - packageName = "chokidar"; - version = "3.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/chokidar/-/chokidar-3.3.0.tgz"; - sha512 = "dGmKLDdT3Gdl7fBUe8XK+gAtGmzy5Fn0XkkWQuYxGIgWVPPse2CxFA5mtrlD0TOHaHjEUqkWNyP1XdHoJES/4A=="; - }; - }; "chokidar-3.5.1" = { name = "chokidar"; packageName = "chokidar"; @@ -14971,6 +14935,15 @@ let sha512 = "9+s+Od+W0VJJzawDma/gvBNQqkTiqYTWLuZoyAsivsI4AaWTCzHG06/TMjsf1cYe9Cb97UCEhjz7HvnPk2p/tw=="; }; }; + "chokidar-3.5.2" = { + name = "chokidar"; + packageName = "chokidar"; + version = "3.5.2"; + src = fetchurl { + url = "https://registry.npmjs.org/chokidar/-/chokidar-3.5.2.tgz"; + sha512 = "ekGhOnNVPgT77r4K/U3GDhu+FQ2S8TnK/s2KbIGXi0SZWuwkZ2QNyfWdZW+TVfn84DpEP7rLeCt2UI6bJ8GwbQ=="; + }; + }; "chownr-0.0.2" = { name = "chownr"; packageName = "chownr"; @@ -15025,13 +14998,13 @@ let sha512 = "HqsYJgIc8ljJJOqOzLphjAs79EUuWSX3nzZi2LNkzlw3GIzAeZbaSektC8iT/tKvLqZq8yl1GJu5o6doA4TRbg=="; }; }; - "chrome-launcher-0.13.4" = { + "chrome-launcher-0.14.0" = { name = "chrome-launcher"; packageName = "chrome-launcher"; - version = "0.13.4"; + version = "0.14.0"; src = fetchurl { - url = "https://registry.npmjs.org/chrome-launcher/-/chrome-launcher-0.13.4.tgz"; - sha512 = "nnzXiDbGKjDSK6t2I+35OAPBy5Pw/39bgkb/ZAFwMhwJbdYBp6aH+vW28ZgtjdU890Q7D+3wN/tB8N66q5Gi2A=="; + url = "https://registry.npmjs.org/chrome-launcher/-/chrome-launcher-0.14.0.tgz"; + sha512 = "W//HpflaW6qBGrmuskup7g+XJZN6w03ko9QSIe5CtcTal2u0up5SeReK3Ll1Why4Ey8dPkv8XSodZyHPnGbVHQ=="; }; }; "chrome-net-3.3.4" = { @@ -15079,13 +15052,13 @@ let sha1 = "01296a3e5d130cce34974eb509cbbc7d6f78dd3d"; }; }; - "chromecasts-1.9.1" = { + "chromecasts-1.10.0" = { name = "chromecasts"; packageName = "chromecasts"; - version = "1.9.1"; + version = "1.10.0"; src = fetchurl { - url = "https://registry.npmjs.org/chromecasts/-/chromecasts-1.9.1.tgz"; - sha512 = "nsXv7ufgrpC8s5DUm6FJEa2XJ2VvE9FmbTVi6r4zGreTFTTSRSJjvqVEqLUFX/fGo/zbSre3zdoV+Pu9DGLz0A=="; + url = "https://registry.npmjs.org/chromecasts/-/chromecasts-1.10.0.tgz"; + sha512 = "vrOiuHxqLb0bWRBlvyL18cHU8PcbZ7iJvwDB6aHdbtdIDVWuzWWZwDyAWHu54j4JNqyaAyYBJiJ6bbHInVcqBQ=="; }; }; "chromium-pickle-js-0.2.0" = { @@ -15223,13 +15196,13 @@ let sha512 = "OlQdbZ7gLfGarSqxesMesDa5uz7KFbID8Kpq/SxIoNGDqY8lSYs0D+hhtBXhcdB3rcbXArFr7vlHheLk1voeNA=="; }; }; - "cldr-5.8.0" = { + "cldr-6.1.1" = { name = "cldr"; packageName = "cldr"; - version = "5.8.0"; + version = "6.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/cldr/-/cldr-5.8.0.tgz"; - sha512 = 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packageName = "cli-ux"; - version = "5.5.1"; + version = "5.6.2"; src = fetchurl { - url = "https://registry.npmjs.org/cli-ux/-/cli-ux-5.5.1.tgz"; - sha512 = "t3DT1U1C3rArLGYLpKa3m9dr/8uKZRI8HRm/rXKL7UTjm4c+Yd9zHNWg1tP8uaJkUbhmvx5SQHwb3VWpPUVdHQ=="; + url = "https://registry.npmjs.org/cli-ux/-/cli-ux-5.6.2.tgz"; + sha512 = "CuiamOCfPaOTjbuAQXdFsfZLQmO6XSmCDxulq4y8pIets1hZ3eaysHppPKGdrcdgLugUGUap5+bXd3IukJASBA=="; }; }; "cli-width-1.1.1" = { @@ -15943,15 +15907,6 @@ let sha512 = "tge3BeOtehBouqo8sdrjRuQxsAWuwUxWJN1pTttZ8HpV+fe2fxmBE9lqrzzOlRIysBvgsZr7D0FdNfrwRwpK8A=="; }; }; - "code-error-fragment-0.0.230" = { - name = "code-error-fragment"; - packageName = "code-error-fragment"; - version = "0.0.230"; - src = fetchurl { - url = "https://registry.npmjs.org/code-error-fragment/-/code-error-fragment-0.0.230.tgz"; - sha512 = "cadkfKp6932H8UkhzE/gcUqhRMNf8jHzkAN7+5Myabswaghu4xABTgPHDCjW+dBAJxj/SpkTYokpzDqY4pCzQw=="; - }; - }; "code-excerpt-3.0.0" = { name = "code-excerpt"; packageName = 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- version = "1.1.12"; + version = "1.1.13"; src = fetchurl { - url = "https://registry.npmjs.org/config-chain/-/config-chain-1.1.12.tgz"; - sha512 = "a1eOIcu8+7lUInge4Rpf/n4Krkf3Dd9lqhljRzII1/Zno/kRtUWnznPO3jOKBmTEktkt3fkxisUcivoj0ebzoA=="; + url = "https://registry.npmjs.org/config-chain/-/config-chain-1.1.13.tgz"; + sha512 = "qj+f8APARXHrM0hraqXYb2/bOVSV4PvJQlNZ/DVj0QrmNM2q2euizkeuVckQ57J+W0mRH6Hvi+k50M4Jul2VRQ=="; }; }; "configstore-1.4.0" = { @@ -17041,13 +16996,13 @@ let sha1 = "c20b96d8c617748aaf1c16021760cd27fcb8cb75"; }; }; - "constructs-3.3.75" = { + "constructs-3.3.87" = { name = "constructs"; packageName = "constructs"; - version = "3.3.75"; + version = "3.3.87"; src = fetchurl { - url = "https://registry.npmjs.org/constructs/-/constructs-3.3.75.tgz"; - sha512 = "q10foASSSfDWmS99OQLfnWDXCzqLvoORISAVWPFg0AmIGlBv2ZdDOtXxLqrJARPxVlOldmW2JzWzdRI+4+0/ZA=="; + url = "https://registry.npmjs.org/constructs/-/constructs-3.3.87.tgz"; + sha512 = 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"convert-source-map-1.8.0" = { name = "convert-source-map"; packageName = "convert-source-map"; - version = "1.7.0"; + version = "1.8.0"; src = fetchurl { - url = "https://registry.npmjs.org/convert-source-map/-/convert-source-map-1.7.0.tgz"; - sha512 = "4FJkXzKXEDB1snCFZlLP4gpC3JILicCpGbzG9f9G7tGqGCzETQ2hWPrcinA9oU4wtf2biUaEH5065UnMeR33oA=="; + url = "https://registry.npmjs.org/convert-source-map/-/convert-source-map-1.8.0.tgz"; + sha512 = "+OQdjP49zViI/6i7nIJpA8rAl4sV/JdPfU9nZs3VqOwGIgizICvuN2ru6fMd+4llL0tar18UYJXfZ/TWtmhUjA=="; }; }; "convert-to-ecmascript-compatible-varname-0.1.5" = { @@ -17546,40 +17501,40 @@ let sha512 = "Kb2wC0fvsWfQrgk8HU5lW6U/Lcs8+9aaYcy4ZFc6DDlo4nZ7n70dEgE5rtR0oG6ufKDUnrwfWL1mXR5ljDatrQ=="; }; }; - "core-js-3.13.1" = { + "core-js-3.12.0" = { name = "core-js"; packageName = "core-js"; - version = "3.13.1"; + version = "3.12.0"; src = fetchurl { - url = "https://registry.npmjs.org/core-js/-/core-js-3.13.1.tgz"; - sha512 = 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-18473,13 +18428,13 @@ let sha1 = "d1cfd8743c2f849a0abb2fd544db56695d19a490"; }; }; - "csv-parse-4.15.4" = { + "csv-parse-4.16.0" = { name = "csv-parse"; packageName = "csv-parse"; - version = "4.15.4"; + version = "4.16.0"; src = fetchurl { - url = "https://registry.npmjs.org/csv-parse/-/csv-parse-4.15.4.tgz"; - sha512 = "OdBbFc0yZhOm17lSxqkirrHlFFVpKRT0wp4DAGoJelsP3LbGzV9LNr7XmM/lrr0uGkCtaqac9UhP8PDHXOAbMg=="; + url = "https://registry.npmjs.org/csv-parse/-/csv-parse-4.16.0.tgz"; + sha512 = "Zb4tGPANH4SW0LgC9+s9Mnequs9aqn7N3/pCqNbVjs2XhEF6yWNU2Vm4OGl1v2Go9nw8rXt87Cm2QN/o6Vpqgg=="; }; }; "csv-parser-1.12.1" = { @@ -18824,13 +18779,13 @@ let sha512 = "XG4d1c/UJSEX9NfU02KwBL6BYPj8YKHxgBEw5om2ZnTRSbIcego6dhHwcxuSR3clxh0EpE38os1DVPOmnYtTPg=="; }; }; - "d3-geo-2.0.1" = { + "d3-geo-2.0.2" = { name = "d3-geo"; packageName = "d3-geo"; - version = "2.0.1"; + version = "2.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/d3-geo/-/d3-geo-2.0.1.tgz"; - sha512 = 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+ sha512 = "33idhm54QJzf3Q7QofMgCvIVSd2o9H3kQPWaKT/fhoZh+digc+WSiMhbkeG3iN79WY4Hwr9G05NpbhEVrsOYAg=="; }; }; "dezalgo-1.0.3" = { @@ -20597,13 +20561,13 @@ let sha512 = "Hq8o7+6GaZeoFjtpgvRBUknSXNeJiCx7V9Fr94ZMljNiCr9n9L8H8aJqgWOQiDDGdyn29fRNcDdRVJ5fdyihfg=="; }; }; - "diff2html-3.4.4" = { + "diff2html-3.4.5" = { name = "diff2html"; packageName = "diff2html"; - version = "3.4.4"; + version = "3.4.5"; src = fetchurl { - url = "https://registry.npmjs.org/diff2html/-/diff2html-3.4.4.tgz"; - sha512 = "yAvhx2GbzzWCAWTepQJrdIPyrjL/29A5UepSAPwnHvwVB41N9oAMshonZmulrFFAFkDN8u9OHKKf/p3R06xuvQ=="; + url = "https://registry.npmjs.org/diff2html/-/diff2html-3.4.5.tgz"; + sha512 = "EvLFeEq4ZAG3URzajoNr2T1C2oQSRYpG+wlPj6d7xKua1+GY6XjZglTobERZUkMm4LyETTmzqHf19kpQljAcgA=="; }; }; "diff3-0.0.3" = { @@ -20966,6 +20930,15 @@ let sha1 = "ea80b106a87538774e8a3a4a5afe293de489e0a9"; }; }; + "doipjs-0.11.2" = { + name = "doipjs"; + packageName = "doipjs"; + version = "0.11.2"; + src = fetchurl { + url = "https://registry.npmjs.org/doipjs/-/doipjs-0.11.2.tgz"; + sha512 = "UZJegmUvMBJS5luh2a64JOVMGO80KdkGY7I9noxr5rmwuiSNzhSy5571DY1z2vacYOrZ1xpxUnlzB0bC9+NiNg=="; + }; + }; "dom-converter-0.2.0" = { name = "dom-converter"; packageName = "dom-converter"; @@ -21191,13 +21164,13 @@ let sha512 = "Lgd2XcJ/NjEw+7tFvfKxOzCYKZsdct5lczQ2ZaQY8Djz7pfAD3Gbp8ySJWtreII/vDlMVmxwa6pHmdxIYgttDg=="; }; }; - "domutils-2.6.0" = { + "domutils-2.7.0" = { name = "domutils"; packageName = "domutils"; - version = "2.6.0"; + version = "2.7.0"; src = fetchurl { - url = "https://registry.npmjs.org/domutils/-/domutils-2.6.0.tgz"; - sha512 = "y0BezHuy4MDYxh6OvolXYsH+1EMGmFbwv5FKW7ovwMG6zTPWqNPq3WF9ayZssFq+UlKdffGLbOEaghNdaOm1WA=="; + url = "https://registry.npmjs.org/domutils/-/domutils-2.7.0.tgz"; + sha512 = "8eaHa17IwJUPAiB+SoTYBo5mCdeMgdcAoXJ59m6DT1vw+5iLS3gNoqYaRowaBKtGVrOF1Jz4yDTgYKLK2kvfJg=="; }; }; "dot-case-3.0.4" = { @@ -21281,15 +21254,6 @@ let sha512 = 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packageName = "es-module-lexer"; + version = "0.6.0"; + src = fetchurl { + url = "https://registry.npmjs.org/es-module-lexer/-/es-module-lexer-0.6.0.tgz"; + sha512 = "f8kcHX1ArhllUtb/wVSyvygoKCznIjnxhLxy7TCvIiMdT7fL4ZDTIKaadMe6eLvOXg6Wk02UeoFgUoZ2EKZZUA=="; + }; + }; "es-to-primitive-1.2.1" = { name = "es-to-primitive"; packageName = "es-to-primitive"; @@ -22534,15 +22516,6 @@ let sha512 = "p5um32HOTO1kP+w7PRnB+5lQ43Z6muuMuIMffvDN8ZB4GcnjLBV6zGStpbASIMk4DCAvEaamhe2zhyCb/QXXsA=="; }; }; - "esbuild-0.11.10" = { - name = "esbuild"; - packageName = "esbuild"; - version = "0.11.10"; - src = fetchurl { - url = "https://registry.npmjs.org/esbuild/-/esbuild-0.11.10.tgz"; - sha512 = "XvGbf+UreVFA24Tlk6sNOqNcvF2z49XAZt4E7A4H80+yqn944QOLTTxaU0lkdYNtZKFiITNea+VxmtrfjvnLPA=="; - }; - }; "esc-exit-2.0.2" = { name = "esc-exit"; packageName = "esc-exit"; @@ -22714,22 +22687,22 @@ let sha512 = "S3Rz11i7c8AA5JPv7xAH+dOyq/Cu/VXHiHXBPOU1k/JAM5dXqQPt3qcrhpHSorXmrpu2g0gkIBVXAqCpzfoZIg=="; }; }; - "eslint-7.24.0" = { + "eslint-7.28.0" = { name = "eslint"; packageName = "eslint"; - version = "7.24.0"; + version = "7.28.0"; src = fetchurl { - url = "https://registry.npmjs.org/eslint/-/eslint-7.24.0.tgz"; - sha512 = "k9gaHeHiFmGCDQ2rEfvULlSLruz6tgfA8DEn+rY9/oYPFFTlz55mM/Q/Rij1b2Y42jwZiK3lXvNTw6w6TXzcKQ=="; + url = "https://registry.npmjs.org/eslint/-/eslint-7.28.0.tgz"; + sha512 = "UMfH0VSjP0G4p3EWirscJEQ/cHqnT/iuH6oNZOB94nBjWbMnhGEPxsZm1eyIW0C/9jLI0Fow4W5DXLjEI7mn1g=="; }; }; - "eslint-7.27.0" = { + "eslint-7.29.0" = { name = "eslint"; packageName = "eslint"; - version = "7.27.0"; + version = "7.29.0"; src = fetchurl { - url = "https://registry.npmjs.org/eslint/-/eslint-7.27.0.tgz"; - sha512 = "JZuR6La2ZF0UD384lcbnd0Cgg6QJjiCwhMD6eU4h/VGPcVGwawNNzKU41tgokGXnfjOOyI6QIffthhJTPzzuRA=="; + url = "https://registry.npmjs.org/eslint/-/eslint-7.29.0.tgz"; + sha512 = "82G/JToB9qIy/ArBzIWG9xvvwL3R86AlCjtGw+A29OMZDqhTybz/MByORSukGxeI+YPCR4coYyITKk8BFH9nDA=="; }; }; "eslint-config-prettier-8.3.0" = { @@ -22741,13 +22714,13 @@ let sha512 = "BgZuLUSeKzvlL/VUjx/Yb787VQ26RU3gGjA3iiFvdsp/2bMfVIWUVP7tjxtjS0e+HP409cPlPvNkQloz8C91ew=="; }; }; - "eslint-plugin-no-unsanitized-3.1.4" = { + "eslint-plugin-no-unsanitized-3.1.5" = { name = "eslint-plugin-no-unsanitized"; packageName = "eslint-plugin-no-unsanitized"; - version = "3.1.4"; + version = "3.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/eslint-plugin-no-unsanitized/-/eslint-plugin-no-unsanitized-3.1.4.tgz"; - sha512 = "WF1+eZo2Sh+bQNjZuVNwT0dA61zuJORsLh+1Sww7+O6GOPw+WPWIIRfTWNqrmaXaDMhM4SXAqYPcNlhRMiH13g=="; + url = "https://registry.npmjs.org/eslint-plugin-no-unsanitized/-/eslint-plugin-no-unsanitized-3.1.5.tgz"; + sha512 = "s/6w++p1590h/H/dE2Wo660bOkaM/3OEK14Y7xm1UT0bafxkKw1Cq0ksjxkxLdH/WWd014DlsLKuD6CyNrR2Dw=="; }; }; "eslint-plugin-prettier-3.4.0" = { @@ -22768,13 +22741,13 @@ let sha512 = "Nhc+oVAHm0uz/PkJAWscwIT4ijTrK5fqNqz9QB1D35SbbuMG1uB6Yr5AJpvPSWg+WOw7nYNswerYh0kOk64gqQ=="; }; }; - "eslint-plugin-vue-7.10.0" = { + "eslint-plugin-vue-7.11.1" = { name = "eslint-plugin-vue"; packageName = "eslint-plugin-vue"; - version = "7.10.0"; + version = "7.11.1"; src = fetchurl { - url = "https://registry.npmjs.org/eslint-plugin-vue/-/eslint-plugin-vue-7.10.0.tgz"; - sha512 = "xdr6e4t/L2moRAeEQ9HKgge/hFq+w9v5Dj+BA54nTAzSFdUyKLiSOdZaRQjCHMY0Pk2WaQBFH9QiWG60xiC+6A=="; + url = "https://registry.npmjs.org/eslint-plugin-vue/-/eslint-plugin-vue-7.11.1.tgz"; + sha512 = "lbw3vkEAGqYjqd1HpPFWHXtYaS8mILTJ5KOpJfRxO3Fo7o0wCf1zD7vSOasbm6nTA9xIgvZQ4VcyGIzQXxznHw=="; }; }; "eslint-scope-3.7.3" = { @@ -22840,15 +22813,6 @@ let sha512 = "6J72N8UNa462wa/KFODt/PJ3IU60SDpC3QXC1Hjc1BXXpfL2C9R5+AU7jhe0F6GREqVMh4Juu+NY7xn+6dipUQ=="; }; }; - "eslint-visitor-keys-2.0.0" = { - name = "eslint-visitor-keys"; - packageName = "eslint-visitor-keys"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/eslint-visitor-keys/-/eslint-visitor-keys-2.0.0.tgz"; - sha512 = 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let sha1 = "6197a095d5fb6b57e8942f6fd7eaad63a09c9452"; }; }; - "eventemitter2-6.4.3" = { - name = "eventemitter2"; - packageName = "eventemitter2"; - version = "6.4.3"; - src = fetchurl { - url = "https://registry.npmjs.org/eventemitter2/-/eventemitter2-6.4.3.tgz"; - sha512 = "t0A2msp6BzOf+QAcI6z9XMktLj52OjGQg+8SJH6v5+3uxNpWYRR3wQmfA+6xtMU9kOC59qk9licus5dYcrYkMQ=="; - }; - }; "eventemitter2-6.4.4" = { name = "eventemitter2"; packageName = "eventemitter2"; @@ -23506,13 +23461,13 @@ let sha512 = "j5W0//W7f8UxAn8hXVnwG8tLwdiUy4FJLcSupCg6maBYZDpyBvTApK7KyuI4bKj8KOh1r2YH+6ucuYtJv1bTZA=="; }; }; - "execa-5.0.1" = { + "execa-5.1.1" = { name = "execa"; packageName = "execa"; - version = "5.0.1"; + version = "5.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/execa/-/execa-5.0.1.tgz"; - sha512 = "4hFTjFbFzQa3aCLobpbPJR/U+VoL1wdV5ozOWjeet0AWDeYr9UFGM1eUFWHX+VtOWFq4p0xXUXfW1YxUaP4fpw=="; + url = "https://registry.npmjs.org/execa/-/execa-5.1.1.tgz"; + sha512 = "8uSpZZocAZRBAPIEINJj3Lo9HyGitllczc27Eh5YYojjMFMn8yHMDMaUHE2Jqfq05D/wucwI4JGURyXt1vchyg=="; }; }; "execall-1.0.0" = { @@ -23659,13 +23614,13 @@ let sha1 = "a793d3ac0cad4c6ab571e9968fbbab6cb2532929"; }; }; - "expo-pwa-0.0.82" = { + "expo-pwa-0.0.84" = { name = "expo-pwa"; packageName = "expo-pwa"; - version = "0.0.82"; + version = "0.0.84"; src = fetchurl { - url = "https://registry.npmjs.org/expo-pwa/-/expo-pwa-0.0.82.tgz"; - sha512 = "4TSJRmVl3/gOQbE56Xe7P+A+zIqNF2asqMtC8Au/YQF0o4emmEAICEwCCRMg2jdtgq7qVDwWjBfMNLDdGS4HrQ=="; + url = "https://registry.npmjs.org/expo-pwa/-/expo-pwa-0.0.84.tgz"; + sha512 = "esZ6a5ObdnWn8h9METs3WuUbGEq16vh4wq1jwSK81oBJKIxijd5M0JbqDqhOsT4rIjuH8ZfQKsl0C1AtLIAfgQ=="; }; }; "express-2.5.11" = { @@ -24226,6 +24181,15 @@ let sha512 = "4j5uBaTnsYAV5ebkidvxiLUYOwjQ+JSFljeqfTxCrH9bDmlCQaOJFS84oDJ2rAXZq2yskmk3ORfoP9DCwqFNig=="; }; }; + "fast-json-patch-3.0.0-1" = { + name = "fast-json-patch"; + packageName = "fast-json-patch"; + version = "3.0.0-1"; + src = fetchurl { + url = "https://registry.npmjs.org/fast-json-patch/-/fast-json-patch-3.0.0-1.tgz"; + sha512 = "6pdFb07cknxvPzCeLsFHStEy+MysPJPgZQ9LbQ/2O67unQF93SNqfdSqnPPl71YMHX+AD8gbl7iuoGFzHEdDuw=="; + }; + }; "fast-json-stable-stringify-2.1.0" = { name = "fast-json-stable-stringify"; packageName = "fast-json-stable-stringify"; @@ -24262,6 +24226,15 @@ let sha1 = "3d8a5c66883a16a30ca8643e851f19baa7797917"; }; }; + "fast-printf-1.6.5" = { + name = "fast-printf"; + packageName = "fast-printf"; + version = "1.6.5"; + src = fetchurl { + url = "https://registry.npmjs.org/fast-printf/-/fast-printf-1.6.5.tgz"; + sha512 = "0+bBTCT4SOmHg3NFsPO39s+EwUdQiKig4MMye7fM0ea24YprUW35AZuWVQdE0SMBRI/GIQldj8ydQGuVRE95UQ=="; + }; + }; "fast-redact-3.0.1" = { name = "fast-redact"; packageName = "fast-redact"; @@ -24613,6 +24586,15 @@ let sha512 = "uzk64HRpUZyTGZtVuvrjP0FYxzQrBf4rojot6J65YMEbwBLB0CWm0CLojVpwpmFmxcE/lkvYICgfcGozbBq6rw=="; }; }; + "file-type-11.1.0" = { + name = "file-type"; + packageName = "file-type"; + version = "11.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/file-type/-/file-type-11.1.0.tgz"; + sha512 = "rM0UO7Qm9K7TWTtA6AShI/t7H5BPjDeGVDaNyg9BjHAj3PysKy7+8C8D137R88jnR3rFJZQB/tFgydl5sN5m7g=="; + }; + }; "file-type-14.7.1" = { name = "file-type"; packageName = "file-type"; @@ -24739,6 +24721,15 @@ let sha512 = "ICw7NTT6RsDp2rnYKVd8Fu4cr6ITzGy3+u4vUujPkabyaz+03F24NWEX7fs5fp+kBonlaqPH8fAO2NM+SXt/JA=="; }; }; + "filenamify-3.0.0" = { + name = "filenamify"; + packageName = "filenamify"; + version = "3.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/filenamify/-/filenamify-3.0.0.tgz"; + sha512 = "5EFZ//MsvJgXjBAFJ+Bh2YaCTRF/VP1YOmGrgt+KJ4SFRLjI87EIdwLLuT6wQX0I4F9W41xutobzczjsOKlI/g=="; + }; + }; "filenamify-4.1.0" = { name = "filenamify"; packageName = "filenamify"; @@ -25072,15 +25063,6 @@ let sha512 = "lNaHNVymajmk0OJMBn8fVUAU1BtDeKIqKoVhk4xAALB57aALg6b4W0MfJ/cUE0g9YBXy5XhSlPIpYIJ7HaY/3Q=="; }; }; - "flat-4.1.1" = { - name = "flat"; - packageName = "flat"; - version = "4.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/flat/-/flat-4.1.1.tgz"; - sha512 = "FmTtBsHskrU6FJ2VxCnsDb84wu9zhmO3cUX2kGFb5tuwhfXxGciiT0oRY+cck35QmG+NmGh5eLz6lLCpWTqwpA=="; - }; - }; "flat-5.0.2" = { name = "flat"; packageName = "flat"; @@ -25207,13 +25189,13 @@ let sha512 = "jlbUu0XkbpXeXhan5xyTqVK1jmEKNxE8hpzznI3TThHTr76GiFwK0iRzhDo4KNy+S9h/KxHaqVhTP86vA6wHCg=="; }; }; - "flow-parser-0.152.0" = { + "flow-parser-0.153.0" = { name = "flow-parser"; packageName = "flow-parser"; - version = "0.152.0"; + version = "0.153.0"; src = fetchurl { - url = "https://registry.npmjs.org/flow-parser/-/flow-parser-0.152.0.tgz"; - sha512 = "qRXGE3ztuhyI2ovi4Ixwq7/GUYvKX9wmFdwBof2q5pWHteuveexFrlbwZxSonC0dWz2znA6sW+vce4RXgYLnnQ=="; + url = "https://registry.npmjs.org/flow-parser/-/flow-parser-0.153.0.tgz"; + sha512 = "qa7UODgbofQyruRWqNQ+KM5hO37CenByxhNfAztiwjBsPhWZ5AFh5g+gtLpTWPlzG7X66QdjBB9DuHNUBcaF+Q=="; }; }; "fluent-ffmpeg-2.1.2" = { @@ -26035,15 +26017,6 @@ let sha512 = "oWb1Z6mkHIskLzEJ/XWX0srkpkTQ7vaopMQkyaEIoq0fmtFVxOthb8cCxeT+p3ynTdkk/RZwbgG4brR5BeWECw=="; }; }; - "fsevents-2.1.3" = { - name = "fsevents"; - packageName = "fsevents"; - version = "2.1.3"; - src = fetchurl { - url = "https://registry.npmjs.org/fsevents/-/fsevents-2.1.3.tgz"; - sha512 = "Auw9a4AxqWpa9GUfj370BMPzzyncfBABW8Mab7BGWBYDj4Isgq+cDKtx0i6u9jcX9pQDnswsaaOTgTmA5pEjuQ=="; - }; - }; "fsevents-2.3.2" = { name = "fsevents"; packageName = "fsevents"; @@ -26179,31 +26152,31 @@ let sha1 = "cbed2d20a40c1f5679a35908e2b9415733e78db9"; }; }; - "gatsby-core-utils-2.6.0" = { + "gatsby-core-utils-2.8.0" = { name = "gatsby-core-utils"; packageName = "gatsby-core-utils"; - version = "2.6.0"; + version = "2.8.0"; src = fetchurl { - url = "https://registry.npmjs.org/gatsby-core-utils/-/gatsby-core-utils-2.6.0.tgz"; - sha512 = "d8a/iblc3wIrLEOWTUcoK5uYE2DrvlQmeulx6DK3NY49KD8jet8ozB6T5GA1CftsvowWeO6aaDnoWDbTxIxTRA=="; + url = "https://registry.npmjs.org/gatsby-core-utils/-/gatsby-core-utils-2.8.0.tgz"; + sha512 = "CadvILN4ZyYMYQAp+haxSgE/0k5zIu6y2WcqVSJaQLmmWq0o49Gv4CftVKOEXOtXaN0DEr9e4wWFVBRAYaRHGA=="; }; }; - "gatsby-recipes-0.17.0" = { + "gatsby-recipes-0.19.0" = { name = "gatsby-recipes"; packageName = "gatsby-recipes"; - version = "0.17.0"; + version = "0.19.0"; src = fetchurl { - url = "https://registry.npmjs.org/gatsby-recipes/-/gatsby-recipes-0.17.0.tgz"; - sha512 = "tC2xUa05zrUp77DTyQE11ILhFiqv9JYxBHhh47b7tJGiLAU1XhjxZH0uFZ109r9wEeZjxTYOYkyoiTu+0Ps4pw=="; + url = "https://registry.npmjs.org/gatsby-recipes/-/gatsby-recipes-0.19.0.tgz"; + sha512 = "yboFABHUNB9+1x/RA13yKU/P0/2K+SaenudC+THshxL4uiUHlbU029iXp6Di2zMfIhak8aZ7FyUrpCieey/0Rw=="; }; }; - "gatsby-telemetry-2.6.0" = { + "gatsby-telemetry-2.8.0" = { name = "gatsby-telemetry"; packageName = "gatsby-telemetry"; - version = "2.6.0"; + version = "2.8.0"; src = fetchurl { - url = "https://registry.npmjs.org/gatsby-telemetry/-/gatsby-telemetry-2.6.0.tgz"; - sha512 = "ENrhT4tkETj9Gq48d+ziiyNTX8Q8/5EyqqWvDUTCSefeHV5xpBclJ+CEnxZkmkEa/QSoBCpjws2VbxnTmRwjWA=="; + url = "https://registry.npmjs.org/gatsby-telemetry/-/gatsby-telemetry-2.8.0.tgz"; + sha512 = "MlV9Lbminhsz1MUiWJJvZ+8VVhIYBl2AsxJylckGoUp+skGfNq5d3pWSv+u/nU4zVP8T1HUWc1c7KSVq6ggrbw=="; }; }; "gauge-1.2.7" = { @@ -26251,13 +26224,13 @@ let sha512 = "4FcCj9e8j8rCjvLkqRpGZBLgTC/xr9XEf5By3x77cDucWWB3pJK6FEwXZCTCbb4z8xdaOoi4owBNrvn3ciDdxA=="; }; }; - "gcp-metadata-4.2.1" = { + "gcp-metadata-4.3.0" = { name = "gcp-metadata"; packageName = "gcp-metadata"; - version = "4.2.1"; + version = "4.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/gcp-metadata/-/gcp-metadata-4.2.1.tgz"; - sha512 = "tSk+REe5iq/N+K+SK1XjZJUrFPuDqGZVzCy2vocIHIGmPlTGsa8owXMJwGkrXr73NO0AzhPW4MF2DEHz7P2AVw=="; + url = "https://registry.npmjs.org/gcp-metadata/-/gcp-metadata-4.3.0.tgz"; + sha512 = "L9XQUpvKJCM76YRSmcxrR4mFPzPGsgZUH+GgHMxAET8qc6+BhRJq63RLhWakgEO2KKVgeSDVfyiNjkGSADwNTA=="; }; }; "gelf-stream-1.1.1" = { @@ -26593,13 +26566,13 @@ let sha1 = "5eff8e3e684d569ae4cb2b1282604e8ba62149fa"; }; }; - "gh-release-fetch-1.1.0" = { + "gh-release-fetch-2.0.0" = { name = "gh-release-fetch"; packageName = "gh-release-fetch"; - version = "1.1.0"; + version = "2.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/gh-release-fetch/-/gh-release-fetch-1.1.0.tgz"; - sha512 = "c8Vb2g6yzTItFGooCH2yppiwu8BwoWheMAWHl/qor95XcuDjFgqMYw8QUtvR/da+ZII5EYDPonZTypvI2anm4Q=="; + url = "https://registry.npmjs.org/gh-release-fetch/-/gh-release-fetch-2.0.0.tgz"; + sha512 = "04eT1dMAW5dUgnb/zkOxXXHTLaQpWuZi1gM93sP6KMHtIqyNsCiALHnljh+aomm90L4t3VkSKaCdwottLgVLwQ=="; }; }; "git-apply-delta-0.0.7" = { @@ -26854,15 +26827,6 @@ let sha512 = "MJTUg1kjuLeQCJ+ccE4Vpa6kKVXkPYJ2mOCQyUuKLcLQsdrMCpBPUi8qVE6+YuaJkozeA9NusTAw3hLr8Xe5EQ=="; }; }; - "glob-7.1.3" = { - name = "glob"; - packageName = "glob"; - version = "7.1.3"; - src = fetchurl { - url = "https://registry.npmjs.org/glob/-/glob-7.1.3.tgz"; - sha512 = "vcfuiIxogLV4DlGBHIUOwI0IbrJ8HWPc4MU7HzviGeNho/UJDfi6B5p3sHeWIQ0KGIU0Jpxi5ZHxemQfLkkAwQ=="; - }; - }; "glob-7.1.6" = { name = "glob"; packageName = "glob"; @@ -27134,15 +27098,6 @@ let sha512 = "WOBp/EEGUiIsJSp7wcv/y6MO+lV9UoncWqxuFfm8eBwzWNgyfBd6Gz+IeKQ9jCmyhoH99g15M3T+QaVHFjizVA=="; }; }; - "globals-12.4.0" = { - name = "globals"; - packageName = "globals"; - version = "12.4.0"; - src = fetchurl { - url = "https://registry.npmjs.org/globals/-/globals-12.4.0.tgz"; - sha512 = "BWICuzzDvDoH54NHKCseDanAhE3CeDorgDL5MT6LMXXj2WCnd9UC2szdk4AWLfjdgNBCXLUanXYcpBBKOSWGwg=="; - }; - }; "globals-13.9.0" = { name = "globals"; packageName = "globals"; @@ -27197,13 +27152,13 @@ let sha512 = "iH9RmgwCmUJHi2z5o2l3eTtGBtXek1OYlHrbcxOYugyHLmAsZrPj43OtHThd62Buh/Vv6VyCBD2bdyWcGNQqoQ=="; }; }; - "globby-11.0.3" = { + "globby-11.0.4" = { name = "globby"; packageName = "globby"; - version = "11.0.3"; + version = "11.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/globby/-/globby-11.0.3.tgz"; - sha512 = "ffdmosjA807y7+lA1NM0jELARVmYul/715xiILEjo3hBLPTcirgQNnXECn5g3mtR8TOLCVbkfua1Hpen25/Xcg=="; + url = "https://registry.npmjs.org/globby/-/globby-11.0.4.tgz"; + sha512 = "9O4MVG9ioZJ08ffbcyVYyLOJLk5JQ688pJ4eMGLpdWLHq/Wr1D9BlriLQyL0E+jbkuePVZXYFj47QM/v093wHg=="; }; }; "globby-4.1.0" = { @@ -27296,22 +27251,22 @@ let sha1 = "2edeeb958084d0f8ea7988e5d995b1c7dfc14777"; }; }; - "goldengate-10.0.3" = { + "goldengate-10.0.6" = { name = "goldengate"; packageName = "goldengate"; - version = "10.0.3"; + version = "10.0.6"; src = fetchurl { - url = "https://registry.npmjs.org/goldengate/-/goldengate-10.0.3.tgz"; - sha512 = "zNvkjnJQWbFWtK7or4CtX0WMy2n5AfMVnob5ipf+AznwLxKX8KyqY9W4bzYpVh6Xjm9N21ZUbubsPheV3mA4qQ=="; + url = "https://registry.npmjs.org/goldengate/-/goldengate-10.0.6.tgz"; + sha512 = "6nwFndjr71Od5XL53oVtlwf3gk8EI/zkKrcjeRAS/G6XLFzPsrOe4npeuom+mgkfgE0rRJFtoOY0wrYgDGuYSg=="; }; }; - "goldengate-10.0.4" = { + "goldengate-10.1.0" = { name = "goldengate"; packageName = "goldengate"; - version = "10.0.4"; + version = "10.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/goldengate/-/goldengate-10.0.4.tgz"; - sha512 = "WuLSD4trXP8fN8jCpWlNMpobrf1DBYCEy/0+SVrzen6znQepM4rRCByuna1Iy1G/XsbbdFiwYBd9iSxJiwqjDQ=="; + url = "https://registry.npmjs.org/goldengate/-/goldengate-10.1.0.tgz"; + sha512 = "xeMOmvY6a7MBUjU1YPmREgDr7qiM5wZWXzdAZsnJxd0/fd5T0gYNi4saJ2eGvDGSmI+TehDn1bYF1Tvlo2GiBQ=="; }; }; "gonzales-pe-4.3.0" = { @@ -27341,13 +27296,13 @@ let sha512 = "Q+ZjUEvLQj/lrVHF/IQwRo6p3s8Nc44Zk/DALsN+ac3T4HY/g/3rrufkgtl+nZ1TW7DNAw5cTChdVp4apUXVgQ=="; }; }; - "google-auth-library-7.1.0" = { + "google-auth-library-7.1.2" = { name = "google-auth-library"; packageName = "google-auth-library"; - version = "7.1.0"; + version = "7.1.2"; src = fetchurl { - url = "https://registry.npmjs.org/google-auth-library/-/google-auth-library-7.1.0.tgz"; - sha512 = "X+gbkGjnLN3HUZP2W3KBREuA603BXd80ITvL0PeS0QpyDNYz/u0pIZ7aRuGnrSuUc0grk/qxEgtVTFt1ogbP+A=="; + url = "https://registry.npmjs.org/google-auth-library/-/google-auth-library-7.1.2.tgz"; + sha512 = "FMipHgfe2u1LzWsf2n9zEB9KsJ8M3n8OYTHbHtlkzPCyo7IknXQR5X99nfvwUHGuX+iEpihUZxDuPm7+qBYeXg=="; }; }; "google-closure-compiler-js-20170910.0.1" = { @@ -27359,22 +27314,22 @@ let sha512 = "Vric7QFWxzHFxITZ10bmlG1H/5rhODb7hJuWyKWMD8GflpQzRmbMVqkFp3fKvN+U9tPwZItGVhkiOR+84PX3ew=="; }; }; - "google-gax-2.14.1" = { + "google-gax-2.16.0" = { name = "google-gax"; packageName = "google-gax"; - version = "2.14.1"; + version = "2.16.0"; src = fetchurl { - url = "https://registry.npmjs.org/google-gax/-/google-gax-2.14.1.tgz"; - sha512 = "I5RDEN7MEptrCxeHX3ht7nKFGfyjgYX4hQKI9eVMBohMzVbFSwWUndo0CcKXu8es7NhB4gt2XYLm1AHkXhtHpA=="; + url = "https://registry.npmjs.org/google-gax/-/google-gax-2.16.0.tgz"; + sha512 = "IwHxHs9gEbvQ0Ne12taqDjJT9cpoLqM7tJamvctIGmkyqnQrdnbDJTGK2Rf85piMYGzmOuPKas9TkhCaoTVIJA=="; }; }; - "google-p12-pem-3.0.3" = { + "google-p12-pem-3.1.0" = { name = "google-p12-pem"; packageName = "google-p12-pem"; - version = "3.0.3"; + version = "3.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/google-p12-pem/-/google-p12-pem-3.0.3.tgz"; - sha512 = "wS0ek4ZtFx/ACKYF3JhyGe5kzH7pgiQ7J5otlumqR9psmWMYc+U9cErKlCYVYHoUaidXHdZ2xbo34kB+S+24hA=="; + url = "https://registry.npmjs.org/google-p12-pem/-/google-p12-pem-3.1.0.tgz"; + sha512 = "JUtEHXL4DY/N+xhlm7TC3qL797RPAtk0ZGXNs3/gWyiDHYoA/8Rjes0pztkda+sZv4ej1EoO2KhWgW5V9KTrSQ=="; }; }; "goosig-0.10.0" = { @@ -27584,13 +27539,13 @@ let sha512 = "GTCJtzJmkFLWRfFJuoo9RWWa/FfamUHgiFosxi/X1Ani4AVWbeyBenZTNX6dM+7WSbbFfTo/25eh0LLkwHMw2w=="; }; }; - "graphql-15.5.0" = { + "graphql-15.5.1" = { name = "graphql"; packageName = "graphql"; - version = "15.5.0"; + version = "15.5.1"; src = fetchurl { - url = "https://registry.npmjs.org/graphql/-/graphql-15.5.0.tgz"; - sha512 = "OmaM7y0kaK31NKG31q4YbD2beNYa6jBBKtMFT6gLYJljHLJr42IqJ8KX08u3Li/0ifzTU5HjmoOOrwa5BRLeDA=="; + url = "https://registry.npmjs.org/graphql/-/graphql-15.5.1.tgz"; + sha512 = "FeTRX67T3LoE3LWAxxOlW2K3Bz+rMYAC18rRguK4wgXaTZMiJwSUwDmPFo3UadAKbzirKIg5Qy+sNJXbpPRnQw=="; }; }; "graphql-compose-7.25.1" = { @@ -27665,13 +27620,13 @@ let sha512 = "J+vjof74oMlCWXSvt0DOf2APEdZOCdubEvGDUAlqH//VBYcOYsGgRW7Xzorr44LvkjiuvecWc8fChxuZZbChtg=="; }; }; - "graphql-ws-4.7.0" = { + "graphql-ws-4.9.0" = { name = "graphql-ws"; packageName = "graphql-ws"; - version = "4.7.0"; + version = "4.9.0"; src = fetchurl { - url = "https://registry.npmjs.org/graphql-ws/-/graphql-ws-4.7.0.tgz"; - sha512 = "Md8SsmC9ZlsogFPd3Ot8HbIAAqsHh8Xoq7j4AmcIat1Bh6k91tjVyQvA0Au1/BolXSYq+RDvib6rATU2Hcf1Xw=="; + url = "https://registry.npmjs.org/graphql-ws/-/graphql-ws-4.9.0.tgz"; + sha512 = "sHkK9+lUm20/BGawNEWNtVAeJzhZeBg21VmvmLoT5NdGVeZWv5PdIhkcayQIAgjSyyQ17WMKmbDijIPG2On+Ag=="; }; }; "gray-matter-2.1.1" = { @@ -27737,13 +27692,13 @@ let sha512 = "GD7cTz0I4SAede1/+pAbmJRG44zFLPipVtdL9o3vqx9IEyb7b4/Y3s7r6ofI3CchR5GvYJ+8buCSioDv5dQLiA=="; }; }; - "gtoken-5.2.1" = { + "gtoken-5.3.0" = { name = "gtoken"; packageName = "gtoken"; - version = "5.2.1"; + version = "5.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/gtoken/-/gtoken-5.2.1.tgz"; - sha512 = "OY0BfPKe3QnMsY9MzTHTSKn+Vl2l1CcLe6BwDEQj00mbbkl5nyQ/7EUREstg4fQNZ8iYE7br4JJ7TdKeDOPWmw=="; + url = "https://registry.npmjs.org/gtoken/-/gtoken-5.3.0.tgz"; + sha512 = "mCcISYiaRZrJpfqOs0QWa6lfEM/C1V9ASkzFmuz43XBb5s1Vynh+CZy1ECeeJXVGx2PRByjYzb4Y4/zr1byr0w=="; }; }; "gud-1.0.0" = { @@ -28556,13 +28511,13 @@ let sha512 = "om8L9O5XwqeSdwl5NtHgrzK3wcF4fT9T4gb/NktoH8EyoZipas/tvUZLV48xT7fQfMYr9qvb0WEutqdf0LWSqA=="; }; }; - "highlight.js-10.7.2" = { + "highlight.js-10.7.3" = { name = "highlight.js"; packageName = "highlight.js"; - version = "10.7.2"; + version = "10.7.3"; src = fetchurl { - url = "https://registry.npmjs.org/highlight.js/-/highlight.js-10.7.2.tgz"; - sha512 = "oFLl873u4usRM9K63j4ME9u3etNF0PLiJhSQ8rdfuL51Wn3zkD6drf9ZW0dOzjnZI22YYG24z30JcmfCZjMgYg=="; + url = "https://registry.npmjs.org/highlight.js/-/highlight.js-10.7.3.tgz"; + sha512 = "tzcUFauisWKNHaRkN4Wjl/ZA07gENAjFl3J/c480dprkGTg5EQstgaNFqBfUqCq54kZRIEcreTsAgF/m2quD7A=="; }; }; "highlight.js-8.2.0" = { @@ -29583,13 +29538,13 @@ let sha1 = "09dfd4ab9d20e29eb1c3e80b8990378df9e3cb9c"; }; }; - "image-size-0.9.7" = { + "image-size-1.0.0" = { name = "image-size"; packageName = "image-size"; - version = "0.9.7"; + version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/image-size/-/image-size-0.9.7.tgz"; - sha512 = "KRVgLNZkr00YGN0qn9MlIrmlxbRhsCcEb1Byq3WKGnIV4M48iD185cprRtaoK4t5iC+ym2Q5qlArxZ/V1yzDgA=="; + url = "https://registry.npmjs.org/image-size/-/image-size-1.0.0.tgz"; + sha512 = "JLJ6OwBfO1KcA+TvJT+v8gbE6iWbj24LyDNFgFEN0lzegn6cC6a/p3NIDaepMsJjQjlUWqIC7wJv8lBFxPNjcw=="; }; }; "image-type-3.1.0" = { @@ -30141,22 +30096,22 @@ let sha512 = 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sha1 = "4b0da1442104d1b336340e80797e865cf39f7d72"; }; }; - "is-valid-domain-0.0.19" = { + "is-valid-domain-0.0.20" = { name = "is-valid-domain"; packageName = "is-valid-domain"; - version = "0.0.19"; + version = "0.0.20"; src = fetchurl { - url = "https://registry.npmjs.org/is-valid-domain/-/is-valid-domain-0.0.19.tgz"; - sha512 = "NxuZbJABXdGlFNEVphG9bT0YOQE0B75Bv+emGsEjmRnAs9aMUVbdKUafj//yTxApThjqQqRKBd9MJDlnqx8Pmg=="; + url = "https://registry.npmjs.org/is-valid-domain/-/is-valid-domain-0.0.20.tgz"; + sha512 = "Yd9oD7sgCycVvH8CHy5U4fLXibPwxVw2+diudYbT8ZfAiQDtW1H9WvPRR4+rtN9qOll+r+KAfO4SjO28OPpitA=="; }; }; "is-valid-glob-1.0.0" = { @@ -32535,13 +32481,13 @@ let sha1 = "bcb4045c8dd0539c134bc1488cdd3e768a7a9e51"; }; }; - "jquery.terminal-2.25.1" = { + "jquery.terminal-2.26.0" = { name = "jquery.terminal"; packageName = "jquery.terminal"; - version = "2.25.1"; + version = "2.26.0"; src = fetchurl { - url = "https://registry.npmjs.org/jquery.terminal/-/jquery.terminal-2.25.1.tgz"; - 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"lightning-3.3.11" = { name = "lightning"; packageName = "lightning"; - version = "3.3.4"; + version = "3.3.11"; src = fetchurl { - url = "https://registry.npmjs.org/lightning/-/lightning-3.3.4.tgz"; - sha512 = "VpkNbaWlsmTgaWWJPGyYb2dm2v5b+wPQWmfZBJ7V5znL17Q+ef7Csj8PTTgnIccAWE429QL9/OyOzn/JVnZ/PA=="; + url = "https://registry.npmjs.org/lightning/-/lightning-3.3.11.tgz"; + sha512 = "bD57EjMVMBplyEMjXDMo8MvBfPymufU81kYbixqrvaLHoqsmyTMwLzqpa4CurJ5YKAXLJw68ZReDzDb6rj90Sg=="; }; }; - "lightning-3.3.7" = { + "lightning-3.3.9" = { name = "lightning"; packageName = "lightning"; - version = "3.3.7"; + version = "3.3.9"; src = fetchurl { - url = "https://registry.npmjs.org/lightning/-/lightning-3.3.7.tgz"; - sha512 = "fjzFCwXafGUeCwUSiEKToS/A8GO4oxDiDG+XNuL984mgYyJdXLHoTEMdaYZD48yowtfjYCdLks0iypIdg6kn1Q=="; + url = "https://registry.npmjs.org/lightning/-/lightning-3.3.9.tgz"; + sha512 = "z/bfkDEAKyN0HtN7rkiyVlDA3J5L/jxXsE4YuGfQPa8TyPWovyLdo6/aHP0mMy8n+G4tq0g2oKZ/1Z5ONJAVqA=="; + }; + }; + "lilconfig-2.0.3" = { + name = "lilconfig"; + packageName = "lilconfig"; + version = "2.0.3"; + src = fetchurl { + url = "https://registry.npmjs.org/lilconfig/-/lilconfig-2.0.3.tgz"; + sha512 = "EHKqr/+ZvdKCifpNrJCKxBTgk5XupZA3y/aCPY9mxfgBzmgh93Mt/WqjjQ38oMxXuvDokaKiM3lAgvSH2sjtHg=="; }; }; "limit-spawn-0.0.3" = { @@ -34678,40 +34615,31 @@ let sha512 = "04PDPqSlsqIOaaaGZ+41vq5FejI9auqTInicFRndCBgE3bXG8D6W1I+mWhk+1nqbHmyhla/6BUrd5OSiHwKRXw=="; }; }; - "ln-accounting-4.2.7" = { + "ln-accounting-4.3.0" = { name = "ln-accounting"; packageName = "ln-accounting"; - version = "4.2.7"; + version = "4.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/ln-accounting/-/ln-accounting-4.2.7.tgz"; - sha512 = "joCN96uuTS53sfJQ5XBFUsKetXk6GOc7NsXqmPmjn/78swpqkxWLar30BvbweGTIveSvDb9xfCT7v1PfSxgiJg=="; + url = "https://registry.npmjs.org/ln-accounting/-/ln-accounting-4.3.0.tgz"; + sha512 = "JfnHWP6hNmA5DCx0OHq7WKwiwPKyD1lb7GPmRqg0NFr8jj9p/PNnxayfjRD2PsmA5C3OxXO53wCy1XymG4I8+Q=="; }; }; - "ln-service-51.5.0" = { + "ln-service-51.8.2" = { name = "ln-service"; packageName = "ln-service"; - version = "51.5.0"; + version = "51.8.2"; src = fetchurl { - url = "https://registry.npmjs.org/ln-service/-/ln-service-51.5.0.tgz"; - sha512 = "Q22CcKJ+52mExGNvOmeEVBza82LGdbLkFVzfMjC9oPlP5DikS+sdlK5GZM/Dc5HFN5pwK7y9Ke7gRue/UxHwbw=="; + url = "https://registry.npmjs.org/ln-service/-/ln-service-51.8.2.tgz"; + sha512 = "X+AFuuw54NEr8UqbkJlEtqkmlpIpmji7BX+bYmYrEOZOtJca7PbaqspVWq+YB9qWw/OiuI76ly67KGTYM0QbCw=="; }; }; - "ln-service-51.7.0" = { + "ln-service-51.8.4" = { name = "ln-service"; packageName = "ln-service"; - version = "51.7.0"; + version = "51.8.4"; src = fetchurl { - url = "https://registry.npmjs.org/ln-service/-/ln-service-51.7.0.tgz"; - sha512 = "n0Ib9fjVL8x3ymdOax6gjmR0Nq59vIhQ89en1XpgxIWbowWhiJUXPolTEgiA8vpeoG72CZN3nYaPXgil9uNVLg=="; - }; - }; - "ln-service-51.8.1" = { - name = "ln-service"; - packageName = "ln-service"; - version = "51.8.1"; - src = fetchurl { - url = 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fetchurl { - url = "https://registry.npmjs.org/log-symbols/-/log-symbols-3.0.0.tgz"; - sha512 = "dSkNGuI7iG3mfvDzUuYZyvk5dD9ocYCYzNU6CYDE6+Xqd+gwme6Z00NS3dUh8mq/73HaEtT7m6W+yUPtU6BZnQ=="; - }; - }; "log-symbols-4.0.0" = { name = "log-symbols"; packageName = "log-symbols"; @@ -36766,13 +36685,13 @@ let sha512 = "rlAEsgU9Bnavca2w1WJ6+6cdeHMXNyadcersyk3ZpuhgWb5HBNj8l4WwJz9PjksAhYDlpQffCVXPctOn+wCIVA=="; }; }; - "lunr-2.3.8" = { + "lunr-2.3.9" = { name = "lunr"; packageName = "lunr"; - version = "2.3.8"; + version = "2.3.9"; src = fetchurl { - url = "https://registry.npmjs.org/lunr/-/lunr-2.3.8.tgz"; - sha512 = "oxMeX/Y35PNFuZoHp+jUj5OSEmLCaIH4KTFJh7a93cHBoFmpw2IoPs22VIz7vyO2YUnx2Tn9dzIwO2P/4quIRg=="; + url = "https://registry.npmjs.org/lunr/-/lunr-2.3.9.tgz"; + sha512 = "zTU3DaZaF3Rt9rhN3uBMGQD3dD2/vFQqnvZCDv4dl5iOzq2IZQqTxu90r4E5J+nP70J3ilqVCrbho2eWaeW8Ow=="; }; }; "lzma-native-6.0.1" = { @@ -36829,13 +36748,13 @@ let sha1 = "d25e32e97c3c2cb89568ba8c98d229d5c305e391"; }; }; - "macos-release-2.4.1" = { + "macos-release-2.5.0" = { name = "macos-release"; packageName = "macos-release"; - version = "2.4.1"; + version = "2.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/macos-release/-/macos-release-2.4.1.tgz"; - sha512 = "H/QHeBIN1fIGJX517pvK8IEK53yQOW7YcEI55oYtgjDdoCQQz7eJS94qt5kNrscReEyuD/JcdFCm2XBEcGOITg=="; + url = "https://registry.npmjs.org/macos-release/-/macos-release-2.5.0.tgz"; + sha512 = "EIgv+QZ9r+814gjJj0Bt5vSLJLzswGmSUbUpbi9AIr/fsN2IWFBl2NucV9PAiek+U1STK468tEkxmVYUtuAN3g=="; }; }; "magic-string-0.22.5" = { @@ -36946,6 +36865,15 @@ let sha512 = "EsS89h6l4vbfJEtBZnENTOFk8mCRpY5ru36Xe5bcX1KYIli2mkSHqoFsp5O1wMDvTJJzxe/4THpCTtygjeeGWQ=="; }; }; + "make-fetch-happen-9.0.3" = { + name = "make-fetch-happen"; + packageName = "make-fetch-happen"; + version = "9.0.3"; + src = fetchurl { + url = "https://registry.npmjs.org/make-fetch-happen/-/make-fetch-happen-9.0.3.tgz"; + sha512 = "uZ/9Cf2vKqsSWZyXhZ9wHHyckBrkntgbnqV68Bfe8zZenlf7D6yuGMXvHZQ+jSnzPkjosuNP1HGasj1J4h8OlQ=="; + }; + }; "make-iterator-1.0.1" = { name = "make-iterator"; packageName = "make-iterator"; @@ -37351,13 +37279,13 @@ let sha512 = "c+yYdCZJQrsRjTPhUx7VKkApw9bwDkNbHUKo1ovgcfDjb2kc8rLuRbIFyXL5WOEUwzSSKo3IXpph2K6DqB/KZg=="; }; }; - "marked-2.0.6" = { + "marked-2.1.2" = { name = "marked"; packageName = "marked"; - version = "2.0.6"; + version = "2.1.2"; src = fetchurl { - url = "https://registry.npmjs.org/marked/-/marked-2.0.6.tgz"; - sha512 = "S2mYj0FzTQa0dLddssqwRVW4EOJOVJ355Xm2Vcbm+LU7GQRGWvwbO5K87OaPSOux2AwTSgtPPaXmc8sDPrhn2A=="; + url = "https://registry.npmjs.org/marked/-/marked-2.1.2.tgz"; + sha512 = "ueJhIvklJJw04qxQbGIAu63EXwwOCYc7yKMBjgagTM4rjC5QtWyqSNgW7jCosV1/Km/1TUfs5qEpAqcGG0Mo5g=="; }; }; "marked-terminal-3.3.0" = { @@ -37918,15 +37846,6 @@ let sha512 = "RE0CwmIM3CEvpcdK3rZ19BC4E6hv9kADkMN5rPduRak58cNArWLi/9jFLsa4rhsjfVxMP3v0jO7FHXq7SvFY5Q=="; }; }; - "memoize-one-5.1.1" = { - name = "memoize-one"; - packageName = "memoize-one"; - version = "5.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/memoize-one/-/memoize-one-5.1.1.tgz"; - sha512 = "HKeeBpWvqiVJD57ZUAsJNm71eHTykffzcLZVYWiVfQeI1rJtuEaS7hQiEpWfVVk18donPwJEcFKIkCmPJNOhHA=="; - }; - }; "memoize-one-5.2.1" = { name = "memoize-one"; packageName = "memoize-one"; @@ -38179,13 +38098,13 @@ let sha1 = "f8a064760d37e7978ad5f9f6d3c119a494f57081"; }; }; - "mermaid-8.10.1" = { + "mermaid-8.10.2" = { name = "mermaid"; packageName = "mermaid"; - version = "8.10.1"; + version = "8.10.2"; src = fetchurl { - url = "https://registry.npmjs.org/mermaid/-/mermaid-8.10.1.tgz"; - sha512 = "KxwKEJDKy303TQdz5TQMFb/4u+gUL21CefUMGOfuigDh9powcYaNmuJ5BkHmO0jB3Y1z2zlsuKvHZ2CusWH5+A=="; + url = "https://registry.npmjs.org/mermaid/-/mermaid-8.10.2.tgz"; + sha512 = "Za5MrbAOMbEsyY4ONgGjfYz06sbwF1iNGRzp1sQqpOtvXxjxGu/J1jRJ8QyE9kD/D9zj1/KlRrYegWEvA7eZ5Q=="; }; }; "meros-1.1.4" = { @@ -38647,15 +38566,6 @@ let sha512 = "/NOTfLrsPBVeH7YtFPgsVWveuL+4SjjYxaQ1xtM1KMFj7HdxlBlxeyNLzhyJVx7r4rZGJAZ/6lkKCitSc/Nmpg=="; }; }; - "mime-db-1.47.0" = { - name = "mime-db"; - packageName = "mime-db"; - version = "1.47.0"; - src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.47.0.tgz"; - sha512 = "QBmA/G2y+IfeS4oktet3qRZ+P5kPhCKRXxXnQEudYqUaEioAU1/Lq2us3D/t1Jfo4hE9REQPrbB7K5sOczJVIw=="; - }; - }; "mime-db-1.48.0" = { name = "mime-db"; packageName = "mime-db"; @@ -38692,13 +38602,13 @@ let sha512 = "JIhqnCasI9yD+SsmkquHBxTSEuZdQX5BuQnS2Vc7puQQQ+8yiP5AY5uWhpdv4YL4VM5c6iliiYWPgJ/nJQLp7w=="; }; }; - "mime-types-2.1.30" = { + "mime-types-2.1.31" = { name = "mime-types"; packageName = "mime-types"; - version = "2.1.30"; + version = "2.1.31"; src = fetchurl { - url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.30.tgz"; - sha512 = "crmjA4bLtR8m9qLpHvgxSChT+XoSlZi8J4n/aIdn3z92e/U47Z0V/yl+Wh9W046GgFVAmoNR/fmdbZYcSSIUeg=="; + url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.31.tgz"; + sha512 = "XGZnNzm3QvgKxa8dpzyhFTHmpP3l5YNusmne07VUOXxou9CqUqYa/HBy124RqtVh/O2pECas/MOcsDgpilPOPg=="; }; }; "mimic-fn-1.2.0" = { @@ -39205,15 +39115,6 @@ let sha1 = "161be5bdeb496771eb9b35745050b622b5aefc58"; }; }; - "mocha-7.2.0" = { - name = "mocha"; - packageName = "mocha"; - version = "7.2.0"; - src = fetchurl { - url = "https://registry.npmjs.org/mocha/-/mocha-7.2.0.tgz"; - sha512 = "O9CIypScywTVpNaRrCAgoUnJgozpIofjKUYmJhiCIJMiuYnLI6otcb1/kpW9/n/tJODHGZ7i8aLQoDVsMtOKQQ=="; - }; - }; "mocha-8.4.0" = { name = "mocha"; packageName = "mocha"; @@ -39421,13 +39322,13 @@ let sha512 = "USHrRmxzGowUWAGBbJPdFjHzEqtxDU03pLHY0Rfqgtnq+q8FOIs8wvkkf+Udmg77SJKs47y9sI0jJvQeYsmiCA=="; }; }; - "move-file-2.0.0" = { + "move-file-2.1.0" = { name = "move-file"; packageName = "move-file"; - version = "2.0.0"; + version = "2.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/move-file/-/move-file-2.0.0.tgz"; - sha512 = "cdkdhNCgbP5dvS4tlGxZbD+nloio9GIimP57EjqFhwLcMjnU+XJKAZzlmg/TN/AK1LuNAdTSvm3CPPP4Xkv0iQ=="; + url = "https://registry.npmjs.org/move-file/-/move-file-2.1.0.tgz"; + sha512 = "i9qLW6gqboJ5Ht8bauZi7KlTnQ3QFpBCvMvFfEcHADKgHGeJ9BZMO7SFCTwHPV9Qa0du9DYY1Yx3oqlGt30nXA=="; }; }; "mp4-box-encoding-1.4.1" = { @@ -40439,22 +40340,31 @@ let sha512 = "AO81vsIO1k1sM4Zrd6Hu7regmJN1NSiAja10gc4bX3F0wd+9rQmcuHQaHVQCYIEC8iFXnE+mavh23GOt7wBgug=="; }; }; - "netlify-7.0.0" = { + "netlify-7.0.1" = { name = "netlify"; packageName = "netlify"; - version = "7.0.0"; + version = "7.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/netlify/-/netlify-7.0.0.tgz"; - sha512 = "s454O7JRqrIo90c6rX+um1Xp7B0dGZBAYaIXYtA3em8DXJ0uWoglDeQSul8qGT1goAAF/9oMPo0T9KTM/XrjqA=="; + url = "https://registry.npmjs.org/netlify/-/netlify-7.0.1.tgz"; + sha512 = "Gd1aexpJ3RrOzkssdE8ipS67PuppOAkJNhRqQPp2in2XnJKPm5kvYonYMNVadasSFlNdmVCk9nELV3TnbAfklw=="; }; }; - "netlify-redirect-parser-3.0.29" = { + "netlify-redirect-parser-7.0.0" = { name = "netlify-redirect-parser"; packageName = "netlify-redirect-parser"; - version = "3.0.29"; + version = "7.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/netlify-redirect-parser/-/netlify-redirect-parser-3.0.29.tgz"; - sha512 = "+lP4IG30CEpjlUaJM7hs/AW84gxkP0svvE80WJOcgB20lilPDkS6K3qeLlybjH/YznzomHZ0EF5Ydr/9d5I99A=="; + url = "https://registry.npmjs.org/netlify-redirect-parser/-/netlify-redirect-parser-7.0.0.tgz"; + sha512 = "O+4b18XZG1Y8Jaki02T58xRFoEAXIH4qxMSlhQXd8qP5WPIicwcQKylC4fdoA2+puQzGkXvEY9Yc5jn8Zpb2pQ=="; + }; + }; + "netlify-redirect-parser-8.0.0" = { + name = "netlify-redirect-parser"; + packageName = "netlify-redirect-parser"; + version = "8.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/netlify-redirect-parser/-/netlify-redirect-parser-8.0.0.tgz"; + sha512 = "4E7YYZHVje+aofCiwznWVZJowf7ed6nrFexlL/ogQaE7745KI8KdHj7itVXAPggpiqiTPj9Iz/LMh/av6iT1Gg=="; }; }; "netlify-redirector-0.2.1" = { @@ -40565,13 +40475,13 @@ let sha512 = "CXdUiJembsNjuToQvxayPZF9Vqht7hewsvy2sOWafLvi2awflj9mOC6bHIg50orX8IJvWKY9wYQ/zB2kogPslQ=="; }; }; - "nextgen-events-1.4.0" = { + "nextgen-events-1.5.2" = { name = "nextgen-events"; packageName = "nextgen-events"; - version = "1.4.0"; + version = "1.5.2"; src = fetchurl { - url = "https://registry.npmjs.org/nextgen-events/-/nextgen-events-1.4.0.tgz"; - sha512 = "bwSpShfuLg/lcRFokZvtUcrn5kumy6uRI6Jc+QWzH+bW6ZRdog7LfwAwhqeTzVfsprZgDGrctr6rO5aJhcdAfg=="; + url = "https://registry.npmjs.org/nextgen-events/-/nextgen-events-1.5.2.tgz"; + sha512 = "0ZEIRQywH5Oxt2IYYufRltQg/KjXhKM7f7MHve+ZIRaKnIR1PPYEXAl2WBmej5Sf0Qh2GgE/21sMRZVuOyxLzw=="; }; }; "nice-try-1.0.5" = { @@ -40646,15 +40556,6 @@ let sha512 = "fgAN3jGAh+RoxUGZHTSOLJIqUc2wmoBwGR4tbpNAKmmovFoWq0OdRkb0VkldReO2a2iBT/OEulG9XSUc10r3zg=="; }; }; - "no-cliches-0.1.1" = { - name = "no-cliches"; - packageName = "no-cliches"; - version = "0.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/no-cliches/-/no-cliches-0.1.1.tgz"; - sha512 = "mYihjs47X5+N71CN3P+QBrEIBuclIfMMpgWEpkmLqFPvrOXdzokvDlhbLfjdBNZOqYgniaeZC6J1ZCgxFdyvXw=="; - }; - }; "no-cliches-0.3.4" = { name = "no-cliches"; packageName = "no-cliches"; @@ -40791,15 +40692,6 @@ let sha256 = "224950cc405150c37dbd3c4aa65dc0cfb799b1a57f674e9bb76f993268106406"; }; }; - "node-environment-flags-1.0.6" = { - name = "node-environment-flags"; - packageName = "node-environment-flags"; - version = "1.0.6"; - src = fetchurl { - url = "https://registry.npmjs.org/node-environment-flags/-/node-environment-flags-1.0.6.tgz"; - sha512 = "5Evy2epuL+6TM0lCQGpFIj6KwiEsGh1SrHUhTbNX+sLbBtjidPZFAnVK9y5yU1+h//RitLbRHTIMyxQPtxMdHw=="; - }; - }; "node-eta-0.9.0" = { name = "node-eta"; packageName = "node-eta"; @@ -40980,6 +40872,15 @@ let sha512 = "h/zcD8H9kaDZ9ALUWwlBUDo6TKF8a7qBSCSEGfjTVIYeqsioSKaAX+BN7NgiMGp6iSIXZ3PxgCu8KS3b71YK5Q=="; }; }; + "node-localstorage-1.3.1" = { + name = "node-localstorage"; + packageName = "node-localstorage"; + version = "1.3.1"; + src = fetchurl { + url = "https://registry.npmjs.org/node-localstorage/-/node-localstorage-1.3.1.tgz"; + sha512 = "NMWCSWWc6JbHT5PyWlNT2i8r7PgGYXVntmKawY83k/M0UJScZ5jirb61TLnqKwd815DfBQu+lR3sRw08SPzIaQ=="; + }; + }; "node-modules-regexp-1.0.0" = { name = "node-modules-regexp"; packageName = "node-modules-regexp"; @@ -41016,13 +40917,13 @@ let sha512 = "fPNFIp2hF/Dq7qLDzSg4vZ0J4e9v60gJR+Qx7RbjbWqzPDdEqeVpEx5CFeDAELIl+A/woaaNn1fQ5nEVerMxJg=="; }; }; - "node-object-hash-2.3.3" = { + "node-object-hash-2.3.7" = { name = "node-object-hash"; packageName = "node-object-hash"; - version = "2.3.3"; + version = "2.3.7"; src = fetchurl { - url = "https://registry.npmjs.org/node-object-hash/-/node-object-hash-2.3.3.tgz"; - sha512 = "KdQsVgu0QoU3ycGidQLcULQdJudW2dizlxJvb2ntV4zxn1oBe7FYBcOO//qIza6oPM1xNwj7Y+rsWxiGPWekOw=="; + url = "https://registry.npmjs.org/node-object-hash/-/node-object-hash-2.3.7.tgz"; + sha512 = "ybV3ZKZZoHJPSelxgRY5LYRHQToMtxvJxNbkY8WtWCy5Z/t3V0gyy/6O6kGoh0PrzZIATxVVDG2q+eM6iZMjKQ=="; }; }; "node-persist-2.1.0" = { @@ -41124,13 +41025,13 @@ let sha512 = "d/CbPGJMSNekJHOQu4WMNwjXRFnZ4c2+D3nlSdRH6wdUVVc++4nat8TuhcXKUe9W9+nqMrmVhReGnf8UwKsfBw=="; }; }; - "node-releases-1.1.72" = { + "node-releases-1.1.73" = { name = "node-releases"; packageName = "node-releases"; - version = "1.1.72"; + version = "1.1.73"; src = fetchurl { - url = "https://registry.npmjs.org/node-releases/-/node-releases-1.1.72.tgz"; - sha512 = "LLUo+PpH3dU6XizX3iVoubUNheF/owjXCZZ5yACDxNnPtgFuludV1ZL3ayK1kVep42Rmm0+R9/Y60NQbZ2bifw=="; + url = "https://registry.npmjs.org/node-releases/-/node-releases-1.1.73.tgz"; + sha512 = "uW7fodD6pyW2FZNZnp/Z3hvWKeEW1Y8R1+1CnErE8cXFXzl5blBOoVB41CvMer6P6Q0S5FXDwcHgFd1Wj0U9zg=="; }; }; "node-source-walk-4.2.0" = { @@ -41457,6 +41358,15 @@ let sha512 = "9UZCFRHQdNrfTpGg8+1INIg93B6zE0aXMVFkw1WFwvO4SlZywU6aLg5Of0Ap/PgcbSw4LNxvMWXMeugwMCX0AA=="; }; }; + "normalize-url-6.1.0" = { + name = "normalize-url"; + packageName = "normalize-url"; + version = "6.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/normalize-url/-/normalize-url-6.1.0.tgz"; + sha512 = "DlL+XwOy3NxAQ8xuC0okPgK46iuVNAK01YN7RueYBqqFeGsBjV9XmCAzAdgt+667bCl5kPh9EqKKDwnaPG1I7A=="; + }; + }; "now-and-later-2.0.1" = { name = "now-and-later"; packageName = "now-and-later"; @@ -41574,6 +41484,15 @@ let sha512 = "6Eem455JsSMJY6Kpd3EyWE+n5hC+g9bSyHr9K9U2zqZb7+02+hObQ2c0+8iDk/mNF+8r1MhY44WypKJAkySIYA=="; }; }; + "npm-package-arg-8.1.5" = { + name = "npm-package-arg"; + packageName = "npm-package-arg"; + version = "8.1.5"; + src = fetchurl { + url = "https://registry.npmjs.org/npm-package-arg/-/npm-package-arg-8.1.5.tgz"; + sha512 = "LhgZrg0n0VgvzVdSm1oiZworPbTxYHUJCgtsJW8mGvlDpxTM1vSJc3m5QZeUkhAHIzbz3VCHd/R4osi1L1Tg/Q=="; + }; + }; "npm-packlist-1.4.8" = { name = "npm-packlist"; packageName = "npm-packlist"; @@ -41637,6 +41556,15 @@ let sha512 = "KsM/TdPmntqgBFlfsbkOLkkE9ovZo7VpVcd+/eTdYszCrgy5zFl5JzWm+OxavFaEWlbkirpkou+ZYI00RmOBFA=="; }; }; + "npm-registry-fetch-11.0.0" = { + name = "npm-registry-fetch"; + packageName = "npm-registry-fetch"; + version = "11.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/npm-registry-fetch/-/npm-registry-fetch-11.0.0.tgz"; + sha512 = "jmlgSxoDNuhAtxUIG6pVwwtz840i994dL14FoNVZisrmZW5kWd63IUTNv1m/hyRSGSqWjCUp/YZlS1BJyNp9XA=="; + }; + }; "npm-registry-fetch-9.0.0" = { name = "npm-registry-fetch"; packageName = "npm-registry-fetch"; @@ -41754,15 +41682,6 @@ let sha1 = "201095a487e1ad36081b3432fa3cada4f8d071b0"; }; }; - "nullthrows-1.1.1" = { - name = "nullthrows"; - packageName = "nullthrows"; - version = "1.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/nullthrows/-/nullthrows-1.1.1.tgz"; - sha512 = "2vPPEi+Z7WqML2jZYddDIfy5Dqb0r2fze2zTxNNknZaFpVHU3mFB3R+DWeJWGVx0ecvttSGlJTI+WG+8Z4cDWw=="; - }; - }; "num-sort-2.1.0" = { name = "num-sort"; packageName = "num-sort"; @@ -41880,22 +41799,13 @@ let sha512 = "2yucenq1a9YPmeNExoUa9Qwrt9RFkjqaMAA1X+U7sbb0AqBeTIdMHky9SQQ6iN94bO5NW0W4TRYXerG+BdAvAQ=="; }; }; - "oas-validator-4.0.8" = { + "oas-validator-5.0.7" = { name = "oas-validator"; packageName = "oas-validator"; - version = "4.0.8"; + version = "5.0.7"; src = fetchurl { - url = "https://registry.npmjs.org/oas-validator/-/oas-validator-4.0.8.tgz"; - sha512 = "bIt8erTyclF7bkaySTtQ9sppqyVc+mAlPi7vPzCLVHJsL9nrivQjc/jHLX/o+eGbxHd6a6YBwuY/Vxa6wGsiuw=="; - }; - }; - "oas-validator-5.0.6" = { - name = "oas-validator"; - packageName = "oas-validator"; - version = "5.0.6"; - src = fetchurl { - url = "https://registry.npmjs.org/oas-validator/-/oas-validator-5.0.6.tgz"; - sha512 = "bI+gyr3MiG/4Q5Ibvg0R77skVWS882gFMkxwB1p6qY7Rc4p7EoDezFVfondjYhJDPDnB1ZD7Aqj7AWROAsMBZg=="; + url = "https://registry.npmjs.org/oas-validator/-/oas-validator-5.0.7.tgz"; + sha512 = "gtOjKWQMVeOBIuioguaXA7sMXfJ9q4efHDFo3kmcy9HZEtmGla3aptQK0LZG1AhOX9zambKUwH72kqgoIJa0Fg=="; }; }; "oauth-0.9.15" = { @@ -42115,15 +42025,6 @@ let sha1 = "f79c4493af0c5377b59fe39d395e41042dd045bb"; }; }; - "object.assign-4.1.0" = { - name = "object.assign"; - packageName = "object.assign"; - version = "4.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/object.assign/-/object.assign-4.1.0.tgz"; - sha512 = "exHJeq6kBKj58mqGyTQ9DFvrZC/eR6OwxzoM9YRoGBqrXYonaFyGiFMuc9VZrXf7DarreEwMpurG3dd+CNyW5w=="; - }; - }; "object.assign-4.1.2" = { name = "object.assign"; packageName = "object.assign"; @@ -42214,13 +42115,13 @@ let sha512 = "tZgUiKLraVH+4OAedBYrr4/K6KmAQw2RPNd1AuNdhLsuz5WP3VB7WuiKBWbOcjeqqAjus2ChIIWC8dSfmg7ReA=="; }; }; - "objectorarray-1.0.4" = { + "objectorarray-1.0.5" = { name = "objectorarray"; packageName = "objectorarray"; - version = "1.0.4"; + version = "1.0.5"; src = fetchurl { - url = "https://registry.npmjs.org/objectorarray/-/objectorarray-1.0.4.tgz"; - sha512 = "91k8bjcldstRz1bG6zJo8lWD7c6QXcB4nTDUqiEvIL1xAsLoZlOOZZG+nd6YPz+V7zY1580J4Xxh1vZtyv4i/w=="; + url = "https://registry.npmjs.org/objectorarray/-/objectorarray-1.0.5.tgz"; + sha512 = "eJJDYkhJFFbBBAxeh8xW+weHlkI28n2ZdQV/J/DNfWfSKlGEf2xcfAbZTv3riEXHAhL9SVOTs2pRmXiSTf78xg=="; }; }; "observ-0.2.0" = { @@ -42277,13 +42178,13 @@ let sha512 = "0HGaSR/E/seIhSzFxLkh0QqckuNSre4iGqSElZRUv1hVHH2YgrZ7xtQL9McwL8o1fh6HqkzykjUx0Iy2haVIUg=="; }; }; - "office-ui-fabric-react-7.170.1" = { + "office-ui-fabric-react-7.172.1" = { name = "office-ui-fabric-react"; packageName = "office-ui-fabric-react"; - version = "7.170.1"; + version = "7.172.1"; src = fetchurl { - url = "https://registry.npmjs.org/office-ui-fabric-react/-/office-ui-fabric-react-7.170.1.tgz"; - sha512 = "NZULXfe9I9W1THYUOFOPr7vLStRbdYNJi3+sJSRrNQHSeeGlUaFbAIOiT8g8h+3Seypk4Ybtm7vZXc6mUHx+Gw=="; + url = "https://registry.npmjs.org/office-ui-fabric-react/-/office-ui-fabric-react-7.172.1.tgz"; + sha512 = "W3QFwxmHAu4Pn65hccuLSx8yiGzto3eRkMgD46OIwDT9smTEF6U3OVSZC/8cpX24BJF9Qe5u034InIfzPLtJeQ=="; }; }; "omggif-1.0.10" = { @@ -42448,15 +42349,6 @@ let sha512 = "kbpaSSGJTWdAY5KPVeMOKXSrPtr8C8C7wodJbcsd51jRnmD+GZu8Y0VoU6Dm5Z4vWr0Ig/1NKuWRKf7j5aaYSg=="; }; }; - "onml-1.3.0" = { - name = "onml"; - packageName = "onml"; - version = "1.3.0"; - src = fetchurl { - url = "https://registry.npmjs.org/onml/-/onml-1.3.0.tgz"; - sha512 = "RhGUsC6Im2A5vAdIvxE3auRKTqrqUZQl/AYLn8+9lM3SO4da5bwhcI5TcM+hfQxNCSLLOVErsl9p0ZPjKKmz+g=="; - }; - }; "onml-2.1.0" = { name = "onml"; packageName = "onml"; @@ -42556,13 +42448,13 @@ let sha512 = "jB5hAtsDOhCy/FNQJwQJOrGlxLUat482Yr14rbA5l2Zb1eOeoS+ccQPO036C1+z9VDBTmOZqzh1tBbI4myzIYw=="; }; }; - "open-8.2.0" = { + "open-8.2.1" = { name = "open"; packageName = "open"; - version = "8.2.0"; + version = "8.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/open/-/open-8.2.0.tgz"; - sha512 = "O8uInONB4asyY3qUcEytpgwxQG3O0fJ/hlssoUHsBboOIRVZzT6Wq+Rwj5nffbeUhOdMjpXeISpDDzHCMRDuOQ=="; + url = "https://registry.npmjs.org/open/-/open-8.2.1.tgz"; + sha512 = "rXILpcQlkF/QuFez2BJDf3GsqpjGKbkUUToAIGo9A0Q6ZkoSGogZJulrUdwRkrAsoQvoZsrjCYt8+zblOk7JQQ=="; }; }; "openapi-default-setter-2.1.0" = { @@ -42808,6 +42700,15 @@ let sha512 = "ljI4GE6p4RYn9dLftlXw6TvlA+untAkoWBRpj4qIB4AJQWcDZ2lOVOJQ2tq346ok38mtGDBYRBvp3Q+AsuCBnQ=="; }; }; + "openpgp-4.10.10" = { + name = "openpgp"; + packageName = "openpgp"; + version = "4.10.10"; + src = fetchurl { + url = "https://registry.npmjs.org/openpgp/-/openpgp-4.10.10.tgz"; + sha512 = "Ub48OogGPjNsr0G/wnJ/SyAQzt/tfcXZTWVZdjKFpXCQV1Ca+upFdSPPkBlGG3lb9EQGOKZJ2tzYNH6ZyKMkDQ=="; + }; + }; "opentracing-0.14.5" = { name = "opentracing"; packageName = "opentracing"; @@ -42889,13 +42790,13 @@ let sha1 = "da3ea74686fa21a19a111c326e90eb15a0196686"; }; }; - "optimize-css-assets-webpack-plugin-5.0.6" = { + "optimize-css-assets-webpack-plugin-5.0.8" = { name = "optimize-css-assets-webpack-plugin"; packageName = "optimize-css-assets-webpack-plugin"; - version = "5.0.6"; + version = "5.0.8"; src = fetchurl { - url = "https://registry.npmjs.org/optimize-css-assets-webpack-plugin/-/optimize-css-assets-webpack-plugin-5.0.6.tgz"; - sha512 = "JAYw7WrIAIuHWoKeSBB3lJ6ZG9PSDK3JJduv/FMpIY060wvbA8Lqn/TCtxNGICNlg0X5AGshLzIhpYrkltdq+A=="; + url = "https://registry.npmjs.org/optimize-css-assets-webpack-plugin/-/optimize-css-assets-webpack-plugin-5.0.8.tgz"; + sha512 = "mgFS1JdOtEGzD8l+EuISqL57cKO+We9GcoiQEmdCWRqqck+FGNmYJtx9qfAPzEz+lRrlThWMuGDaRkI/yWNx/Q=="; }; }; "optional-0.1.4" = { @@ -43024,6 +42925,15 @@ let sha512 = "1StwyXQGoU6gdjYkyVcqOLnVlbKj+6yPNNOxJVgpt9t4eksKjiriiHuxktLYkgllwk+D6MbC4ihH84L1udRXPg=="; }; }; + "ora-5.4.1" = { + name = "ora"; + packageName = "ora"; + version = "5.4.1"; + src = fetchurl { + url = "https://registry.npmjs.org/ora/-/ora-5.4.1.tgz"; + sha512 = "5b6Y85tPxZZ7QytO+BQzysW31HJku27cRIlkbAXaNx+BdcVi+LlRFmVXzeF6a7JCwJpyw5c4b+YSVImQIrBpuQ=="; + }; + }; "ordered-read-streams-1.0.1" = { name = "ordered-read-streams"; packageName = "ordered-read-streams"; @@ -43150,22 +43060,22 @@ let sha512 = "0CWcCECdMVc2Rw3U5w9ZjqX6ga6ubk1xDVKxtBQPK7wis/0F2r9T6k4ydGYhecl7YUBxBVxhL5oisPsNxAPe2g=="; }; }; - "ot-builder-1.0.8" = { + "ot-builder-1.0.9" = { name = "ot-builder"; packageName = "ot-builder"; - version = "1.0.8"; + version = "1.0.9"; src = fetchurl { - url = "https://registry.npmjs.org/ot-builder/-/ot-builder-1.0.8.tgz"; - sha512 = "e9PkE4wr4mskFMNuV5IvCujBVp9Nc+yl5ltu7qad/BNcHIFh4nn9iWFE+Klva6h8prDefgE2FOuG+sYLU0IOrQ=="; + url = "https://registry.npmjs.org/ot-builder/-/ot-builder-1.0.9.tgz"; + sha512 = "y3TBkZdnqoLtHsyPDni+NA43nlN3hGeEfw+5FvrtNplnwMqFtYTTZ0aUa9TCmjyih5dtMOGay8HhOSFGZ5ONhw=="; }; }; - "otb-ttc-bundle-1.0.8" = { + "otb-ttc-bundle-1.0.9" = { name = "otb-ttc-bundle"; packageName = "otb-ttc-bundle"; - version = "1.0.8"; + version = "1.0.9"; src = fetchurl { - url = "https://registry.npmjs.org/otb-ttc-bundle/-/otb-ttc-bundle-1.0.8.tgz"; - sha512 = "VqlzOefegjHk0OTM7XIay7M+v0PSKYznKTmBPCds6X+NfaumDInoBrF7OTrhq5IN1LXlu4TwW29u0wzDCgc2+A=="; + url = "https://registry.npmjs.org/otb-ttc-bundle/-/otb-ttc-bundle-1.0.9.tgz"; + sha512 = "q1PtQMsMMcZluIkNh5Nk469vzM0j8yNzIqab5/xhM0dstnIC/+8ax0yR1uf6MvcKuZSv6Pict/knFs6n/k065w=="; }; }; "ow-0.21.0" = { @@ -43690,13 +43600,13 @@ let sha512 = "lMO7V9aMhyE5gfaSFxKfW3OTdXuFBNQJfuNuet3NPzWWhOYIW90t85vHcHLDjdhgmfAdAHyh9q1HAap96ea0XA=="; }; }; - "pacote-11.3.3" = { + "pacote-11.3.4" = { name = "pacote"; packageName = "pacote"; - version = "11.3.3"; + version = "11.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/pacote/-/pacote-11.3.3.tgz"; - sha512 = "GQxBX+UcVZrrJRYMK2HoG+gPeSUX/rQhnbPkkGrCYa4n2F/bgClFPaMm0nsdnYrxnmUy85uMHoFXZ0jTD0drew=="; + url = "https://registry.npmjs.org/pacote/-/pacote-11.3.4.tgz"; + sha512 = "RfahPCunM9GI7ryJV/zY0bWQiokZyLqaSNHXtbNSoLb7bwTvBbJBEyCJ01KWs4j1Gj7GmX8crYXQ1sNX6P2VKA=="; }; }; "pad-0.0.5" = { @@ -43717,6 +43627,15 @@ let sha1 = "ad1f22ce1bf0fdc0d6ddd908af17f351a404b8ac"; }; }; + "paid-services-2.0.0" = { + name = "paid-services"; + packageName = "paid-services"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/paid-services/-/paid-services-2.0.0.tgz"; + sha512 = "Z79YC8641Zd58D7tSoQayRdEiMbPUyxs88R5z8Wc66P8eUJKxAiKxo3QLxrx+3bDwI90RylZBVkYY7usAu6Tng=="; + }; + }; "pako-0.2.9" = { name = "pako"; packageName = "pako"; @@ -44104,13 +44023,13 @@ let sha1 = "32d4b6afde631420e5f415919a222b774b575707"; }; }; - "parse-url-5.0.2" = { + "parse-url-5.0.3" = { name = "parse-url"; packageName = "parse-url"; - version = "5.0.2"; + version = "5.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/parse-url/-/parse-url-5.0.2.tgz"; - sha512 = "Czj+GIit4cdWtxo3ISZCvLiUjErSo0iI3wJ+q9Oi3QuMYTI6OZu+7cewMWZ+C1YAnKhYTk6/TLuhIgCypLthPA=="; + url = "https://registry.npmjs.org/parse-url/-/parse-url-5.0.3.tgz"; + sha512 = "nrLCVMJpqo12X8uUJT4GJPd5AFaTOrGx/QpJy3HNcVtq0AZSstVIsnxS5fqNPuoqMUs3MyfBoOP6Zvu2Arok5A=="; }; }; "parse5-1.5.1" = { @@ -44986,13 +44905,13 @@ let sha1 = "2135d6dfa7a358c069ac9b178776288228450ffa"; }; }; - "pino-6.11.2" = { + "pino-6.11.3" = { name = "pino"; packageName = "pino"; - version = "6.11.2"; + version = "6.11.3"; src = fetchurl { - url = "https://registry.npmjs.org/pino/-/pino-6.11.2.tgz"; - sha512 = "bmzxwbrIPxQUlAuMkF4PWVErUGERU4z37HazlhflKFg08crsNE3fACGN6gPwg5xtKOK47Ux5cZm8YCuLV4wWJg=="; + url = "https://registry.npmjs.org/pino/-/pino-6.11.3.tgz"; + sha512 = "drPtqkkSf0ufx2gaea3TryFiBHdNIdXKf5LN0hTM82SXI4xVIve2wLwNg92e1MT6m3jASLu6VO7eGY6+mmGeyw=="; }; }; "pino-std-serializers-3.2.0" = { @@ -45292,6 +45211,15 @@ let sha1 = "1a1e55153d41a05534cea23cfe860abaa0eb4ace"; }; }; + "pm2-sysmonit-1.2.8" = { + name = "pm2-sysmonit"; + packageName = "pm2-sysmonit"; + version = "1.2.8"; + src = fetchurl { + url = "https://registry.npmjs.org/pm2-sysmonit/-/pm2-sysmonit-1.2.8.tgz"; + sha512 = "ACOhlONEXdCTVwKieBIQLSi2tQZ8eKinhcr9JpZSUAL8Qy0ajIgRtsLxG/lwPOW3JEKqPyw/UaHmTWhUzpP4kA=="; + }; + }; "pn-1.1.0" = { name = "pn"; packageName = "pn"; @@ -45337,13 +45265,13 @@ let sha512 = "7Wjy+9E3WwLOEL30D+m8TSTF7qJJUJLONBnwQp0518siuMxUQUbgZwssaFX+QKlZkjHZcw/IpZCt/H0srrntSg=="; }; }; - "polished-3.7.2" = { + "polished-4.1.3" = { name = "polished"; packageName = "polished"; - version = "3.7.2"; + version = "4.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/polished/-/polished-3.7.2.tgz"; - sha512 = "pQKtpZGmsZrW8UUpQMAnR7s3ppHeMQVNyMDKtUyKwuvDmklzcEyM5Kllb3JyE/sE/x7arDmyd35i+4vp99H6sQ=="; + url = "https://registry.npmjs.org/polished/-/polished-4.1.3.tgz"; + sha512 = "ocPAcVBUOryJEKe0z2KLd1l9EBa1r5mSwlKpExmrLzsnIzJo4axsoU9O2BjOTkDGDT4mZ0WFE5XKTlR3nLnZOA=="; }; }; "polyraf-1.1.0" = { @@ -45428,31 +45356,31 @@ let sha512 = "03eXong5NLnNCD05xscnGKGDZ98CyzoqPSMjOe6SuoQY7Z2hIj0Ld1g/O/UQRuOle2aRtiIRDg9tDcTGAkLfKw=="; }; }; - "postcss-7.0.35" = { + "postcss-7.0.36" = { name = "postcss"; packageName = "postcss"; - version = "7.0.35"; + version = "7.0.36"; src = fetchurl { - url = "https://registry.npmjs.org/postcss/-/postcss-7.0.35.tgz"; - sha512 = 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= { + name = "prettier"; + packageName = "prettier"; + version = "2.3.1"; + src = fetchurl { + url = "https://registry.npmjs.org/prettier/-/prettier-2.3.1.tgz"; + sha512 = "p+vNbgpLjif/+D+DwAZAbndtRrR0md0MwfmOVN9N+2RgyACMT+7tfaRnT+WDPkqnuVwleyuBIG2XBxKDme3hPA=="; + }; + }; "prettier-bytes-1.0.4" = { name = "prettier-bytes"; packageName = "prettier-bytes"; @@ -46265,13 +46202,13 @@ let sha512 = "GbK2cP9nraSSUF9N2XwUwqfzlAFlMNYYl+ShE/V+H8a9uNl/oUqB1w2EL54Jh0OlyRSd8RfWYJ3coVS4TROP2w=="; }; }; - "prettier-plugin-svelte-2.3.0" = { + "prettier-plugin-svelte-2.3.1" = { name = "prettier-plugin-svelte"; packageName = "prettier-plugin-svelte"; - version = "2.3.0"; + version = "2.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/prettier-plugin-svelte/-/prettier-plugin-svelte-2.3.0.tgz"; - sha512 = "HTzXvSq7lWFuLsSaxYOUkGkVNCl3RrSjDCOgQjkBX5FQGmWjL8o3IFACSGhjPMMfWKADpapAr0zdbBWkND9mqw=="; + url = "https://registry.npmjs.org/prettier-plugin-svelte/-/prettier-plugin-svelte-2.3.1.tgz"; + sha512 = "F1/r6OYoBq8Zgurhs1MN25tdrhPw0JW5JjioPRqpxbYdmrZ3gY/DzHGs0B6zwd4DLyRsfGB2gqhxUCbHt/D1fw=="; }; }; "prettier-stylelint-0.4.2" = { @@ -46391,13 +46328,13 @@ let sha512 = "973driJZvxiGOQ5ONsFhOF/DtzPMOMtgC11kCpUrPGMTgqp2q/1gwzCquocrN33is0VZ5GFHXZYMM9l6h67v2Q=="; }; }; - "pretty-quick-3.1.0" = { + "pretty-quick-3.1.1" = { name = "pretty-quick"; packageName = "pretty-quick"; - version = "3.1.0"; + version = "3.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/pretty-quick/-/pretty-quick-3.1.0.tgz"; - sha512 = "DtxIxksaUWCgPFN7E1ZZk4+Aav3CCuRdhrDSFZENb404sYMtuo9Zka823F+Mgeyt8Zt3bUiCjFzzWYE9LYqkmQ=="; + url = "https://registry.npmjs.org/pretty-quick/-/pretty-quick-3.1.1.tgz"; + sha512 = "ZYLGiMoV2jcaas3vTJrLvKAYsxDoXQBUn8OSTxkl67Fyov9lyXivJTl0+2WVh+y6EovGcw7Lm5ThYpH+Sh3XxQ=="; }; }; "pretty-time-1.1.0" = { @@ -46499,13 +46436,22 @@ let sha512 = "99PZ5+RU4gqiTfK5ZDMDkZtn6eL4WlKfFyVJV7lFQvH3iGmQ85DqMTOdxorERO26LHkevR2qsxnHp0x/2UDJPA=="; }; }; - "probing-1.3.5" = { + "probing-1.3.6" = { name = "probing"; packageName = "probing"; - version = "1.3.5"; + version = "1.3.6"; src = fetchurl { - url = "https://registry.npmjs.org/probing/-/probing-1.3.5.tgz"; - sha512 = "Pn7gjrWqgsCyTIlSgTvhni17I3BsLXXL/QLDcDhEPI84xsyUWpSqiUw7Vr15kKvtPABrwtFb6k81v4kWGLo1ZQ=="; + url = "https://registry.npmjs.org/probing/-/probing-1.3.6.tgz"; + sha512 = "BO8oZu/KY6Z3ZquoEOJSvsUWFTNbGb5K8M+oZCMqT2VFaqceJ33TZJLF+qEAHIFIALagd4jHaKMg2V043ltotQ=="; + }; + }; + "proc-log-1.0.0" = { + name = "proc-log"; + packageName = "proc-log"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/proc-log/-/proc-log-1.0.0.tgz"; + sha512 = "aCk8AO51s+4JyuYGg3Q/a6gnrlDO09NpVWePtjp7xwphcoQ04x5WAfCyugcsbLooWcMJ87CLkD4+604IckEdhg=="; }; }; "process-0.10.1" = { @@ -46580,6 +46526,15 @@ let sha1 = "e260c78f6161cdd9b0e56cc3e0a85de17c7a57be"; }; }; + "progress-2.0.1" = { + name = "progress"; + packageName = "progress"; + version = "2.0.1"; + src = fetchurl { + url = 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"quick-format-unescaped-4.0.1" = { + "quick-format-unescaped-4.0.3" = { name = "quick-format-unescaped"; packageName = "quick-format-unescaped"; - version = "4.0.1"; + version = "4.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/quick-format-unescaped/-/quick-format-unescaped-4.0.1.tgz"; - sha512 = "RyYpQ6Q5/drsJyOhrWHYMWTedvjTIat+FTwv0K4yoUxzvekw2aRHMQJLlnvt8UantkZg2++bEzD9EdxXqkWf4A=="; + url = "https://registry.npmjs.org/quick-format-unescaped/-/quick-format-unescaped-4.0.3.tgz"; + sha512 = "MaL/oqh02mhEo5m5J2rwsVL23Iw2PEaGVHgT2vFt8AAsr0lfvQA5dpXo9TPu0rz7tSBdUPgkbam0j/fj5ZM8yg=="; }; }; "quick-lru-1.1.0" = { @@ -48506,15 +48461,6 @@ let sha1 = "4f68a1dc0ae58bd3fb95848c30324db75d64360b"; }; }; - "random-item-3.1.0" = { - name = "random-item"; - packageName = "random-item"; - version = "3.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/random-item/-/random-item-3.1.0.tgz"; - sha512 = 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}; - "regexpp-3.1.0" = { + "regexpp-3.2.0" = { name = "regexpp"; packageName = "regexpp"; - version = "3.1.0"; + version = "3.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/regexpp/-/regexpp-3.1.0.tgz"; - sha512 = "ZOIzd8yVsQQA7j8GCSlPGXwg5PfmA1mrq0JP4nGhh54LaKN3xdai/vHUDu74pKwV8OxseMS65u2NImosQcSD0Q=="; + url = "https://registry.npmjs.org/regexpp/-/regexpp-3.2.0.tgz"; + sha512 = "pq2bWo9mVD43nbts2wGv17XLiNLya+GklZ8kaDLV2Z08gDCsGpnKn9BFMepvWuHCbyVvY7J5o5+BVvoQbmlJLg=="; }; }; "regexpu-core-4.7.1" = { @@ -49982,13 +49946,13 @@ let sha512 = "F5BMWDmgATEoyPCtKjmGNTGN1ghoZlfRQ3MJh8dS/MrvIUIxupiof/Y9uahChipXcqQ57twVbgMmyQmuO1vokw=="; }; }; - "renderkid-2.0.5" = { + "renderkid-2.0.7" = { name = "renderkid"; packageName = "renderkid"; - version = "2.0.5"; + version = "2.0.7"; src = fetchurl { - url = "https://registry.npmjs.org/renderkid/-/renderkid-2.0.5.tgz"; - sha512 = "ccqoLg+HLOHq1vdfYNm4TBeaCDIi1FLt3wGojTDSvdewUv65oTmI3cnT2E4hRjl1gzKZIPK+KZrXzlUYKnR+vQ=="; + url = "https://registry.npmjs.org/renderkid/-/renderkid-2.0.7.tgz"; + sha512 = "oCcFyxaMrKsKcTY59qnCAtmDVSLfPbrv6A3tVbPdFMMrv5jaK10V6m40cKsoPNhAqN6rmHW9sswW4o3ruSrwUQ=="; }; }; "repeat-element-1.1.4" = { @@ -50837,13 +50801,13 @@ let sha512 = "/2HA0Ec70TvQnXdzynFffkjA6XN+1e2pEv/uKS5Ulca40g2L7KuOE3riasHoNVHOsFD5KKZgDsMk1CP3Tw9s+A=="; }; }; - "rollup-2.50.5" = { + "rollup-2.52.2" = { name = "rollup"; packageName = "rollup"; - version = "2.50.5"; + version = "2.52.2"; src = fetchurl { - url = "https://registry.npmjs.org/rollup/-/rollup-2.50.5.tgz"; - sha512 = "Ztz4NurU2LbS3Jn5rlhnYv35z6pkjBUmYKr94fOBIKINKRO6kug9NTFHArT7jqwMP2kqEZ39jJuEtkk91NBltQ=="; + url = "https://registry.npmjs.org/rollup/-/rollup-2.52.2.tgz"; + sha512 = "4RlFC3k2BIHlUsJ9mGd8OO+9Lm2eDF5P7+6DNQOp5sx+7N/1tFM01kELfbxlMX3MxT6owvLB1ln4S3QvvQlbUA=="; }; }; "rollup-plugin-babel-4.4.0" = { @@ -51080,13 +51044,13 @@ let sha512 = "Arc4hUN896vjkqCYrUXquBFtRZdv1PfLbTYP71efP6butxyQ0kWpiNJyAgsxscmQg1cqvHY32/UCBzXedTpU2g=="; }; }; - "rusha-0.8.13" = { + "rusha-0.8.14" = { name = "rusha"; packageName = "rusha"; - version = "0.8.13"; + version = "0.8.14"; src = fetchurl { - url = "https://registry.npmjs.org/rusha/-/rusha-0.8.13.tgz"; - sha1 = "9a084e7b860b17bff3015b92c67a6a336191513a"; + url = "https://registry.npmjs.org/rusha/-/rusha-0.8.14.tgz"; + sha512 = "cLgakCUf6PedEu15t8kbsjnwIFFR2D4RfL+W3iWFJ4iac7z4B0ZI8fxy4R3J956kAI68HclCFGL8MPoUVC3qVA=="; }; }; "rw-1.3.3" = { @@ -51332,13 +51296,13 @@ let sha512 = "y/52Mcy7aw3gRm7IrcGDFx/bCk4AhRh2eI9luHOQM86nZsqwiRkkq2GekHXBBD+SmPidc8i2PqtYZl+pWJ8Oeg=="; }; }; - "sass-1.34.0" = { + "sass-1.35.1" = { name = "sass"; packageName = "sass"; - version = "1.34.0"; + version = "1.35.1"; src = fetchurl { - url = "https://registry.npmjs.org/sass/-/sass-1.34.0.tgz"; - sha512 = "rHEN0BscqjUYuomUEaqq3BMgsXqQfkcMVR7UhscsAVub0/spUrZGBMxQXFS2kfiDsPLZw5yuU9iJEFNC2x38Qw=="; + url = "https://registry.npmjs.org/sass/-/sass-1.35.1.tgz"; + sha512 = "oCisuQJstxMcacOPmxLNiLlj4cUyN2+8xJnG7VanRoh2GOLr9RqkvI4AxA4a6LHVg/rsu+PmxXeGhrdSF9jCiQ=="; }; }; "sax-0.5.8" = { @@ -51413,6 +51377,15 @@ let sha512 = "n/zwRWRYSUj0/3g/otKDRPMh6qv2SYMWNq85IEa8iZyAv8od9zDYpGSnpBEjNgcMNq6Scbu5KfIPxNF72R/2EA=="; }; }; + "scheduler-0.20.2" = { + name = "scheduler"; + packageName = "scheduler"; + version = "0.20.2"; + src = fetchurl { + url = "https://registry.npmjs.org/scheduler/-/scheduler-0.20.2.tgz"; + sha512 = "2eWfGgAqqWFGqtdMmcL5zCMK1U8KlXv8SQFGglL3CEtd0aDVDWgeF/YoCmvln55m5zSk3J/20hTaSBeSObsQDQ=="; + }; + }; "schema-utils-0.4.7" = { name = "schema-utils"; packageName = "schema-utils"; @@ -52304,6 +52277,15 @@ let sha512 = "oXF8tfxx5cDk8r2kYqlkUJzZpDBqVY/II2WhvU0n9Y3XYvAYRmeaf1PvvIvTgPnv4KJ+ES5M0PyDq5Jp+Ygy2g=="; }; }; + "shq-1.0.2" = { + name = "shq"; + packageName = "shq"; + version = "1.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/shq/-/shq-1.0.2.tgz"; + sha512 = "8AvNyHL75DHlkbLmzF7nzTzT2F0qEfSewwxHjH79Ww8S+hGpIZVlf8b0TcdOwv4HqIkOVBInu9n+wqhUSl9Wag=="; + }; + }; "shush-1.0.0" = { name = "shush"; packageName = "shush"; @@ -52340,13 +52322,13 @@ let sha1 = "3ff21f198cad2175f9f3b781853fd94d0d19b590"; }; }; - "sign-addon-3.3.0" = { + "sign-addon-3.5.0" = { name = "sign-addon"; packageName = "sign-addon"; - version = "3.3.0"; + version = "3.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/sign-addon/-/sign-addon-3.3.0.tgz"; - sha512 = "TZNZfxRb5jnNcGI8gbyGvaI3kLw+M0O9p7yas2eTu3WpLZ66Wy+FAhYOccgpeQQAcKtwf4WaSnfPKYTBBWWiDQ=="; + url = "https://registry.npmjs.org/sign-addon/-/sign-addon-3.5.0.tgz"; + sha512 = "Mc/Cg9P10Zyz8cnz8jSuvUDBnoY6rPExQf1vZvH4l5rfLZCLZVaLhJQ40QOAnbu8sE4TD2VzqB9Zogq7nTPrVA=="; }; }; "signal-exit-3.0.3" = { @@ -52430,13 +52412,13 @@ let sha512 = "rohCHmEjD/ESXFLxF4bVeqgdb4Awc65ZyyuCKl3f7BvgMbZOBa/Ye3HN/GFnvruiUOAWWNupxhz3Rz5/3vJLTg=="; }; }; - "simple-git-2.39.0" = { + "simple-git-2.40.0" = { name = "simple-git"; packageName = "simple-git"; - version = "2.39.0"; + version = "2.40.0"; src = fetchurl { - url = "https://registry.npmjs.org/simple-git/-/simple-git-2.39.0.tgz"; - sha512 = "VOsrmc3fpp1lGVIpo+1SKNqJzrdVJeSGZCeenPKnJPNo5UouAlSkWFc037pfm9wRYtfxBdwp2deVJGCG8J6C8A=="; + url = "https://registry.npmjs.org/simple-git/-/simple-git-2.40.0.tgz"; + sha512 = "7IO/eQwrN5kvS38TTu9ljhG9tx2nn0BTqZOmqpPpp51TvE44YIvLA6fETqEVA8w/SeEfPaVv6mk7Tsk9Jns+ag=="; }; }; "simple-markdown-0.4.4" = { @@ -52718,6 +52700,15 @@ let sha1 = "e09f00899c09f5a7058edc36dd49f046fd50a82a"; }; }; + "slugify-1.4.7" = { + name = "slugify"; + packageName = "slugify"; + version = "1.4.7"; + src = fetchurl { + url = "https://registry.npmjs.org/slugify/-/slugify-1.4.7.tgz"; + sha512 = "tf+h5W1IrjNm/9rKKj0JU2MDMruiopx0jjVA5zCdBtcGjfp0+c5rHw/zADLC3IeKlGHtVbHtpfzvYA0OYT+HKg=="; + }; + }; "slugify-1.5.3" = { name = "slugify"; packageName = "slugify"; @@ -52907,13 +52898,13 @@ let sha512 = "HHuOYEAACpUpkFgU8HT57mmxmonaJ4O3YADoSkVhnhkmJ+AowqZyJOau703dYHNrq2DvQ7qYw81H7yyxS1Nfjw=="; }; }; - "snyk-mvn-plugin-2.26.0" = { + "snyk-mvn-plugin-2.26.1" = { name = "snyk-mvn-plugin"; packageName = "snyk-mvn-plugin"; - version = "2.26.0"; + version = "2.26.1"; src = fetchurl { - url = "https://registry.npmjs.org/snyk-mvn-plugin/-/snyk-mvn-plugin-2.26.0.tgz"; - sha512 = "LxYNWXPJxcwbkCK+vE7t437RttEDcbsS2KJJYzFtrr6u7g26c51u9aMHYPCDAEmwjI1A28zSrh7Wp45JW4YOqg=="; + url = "https://registry.npmjs.org/snyk-mvn-plugin/-/snyk-mvn-plugin-2.26.1.tgz"; + sha512 = "DCs53aRT/uK2e1jXzeVG2d+Ll0bmY/YHL+jEYaWJko8XwGoVwqCrVOkRyzXd2KOZUk3gpD6MaxIrBWsc8RJzRA=="; }; }; "snyk-nodejs-lockfile-parser-1.34.0" = { @@ -53240,13 +53231,13 @@ let sha512 = "kLQ9N5ucj8uIcxrDwjm0Jsqk06xdpBjGNQtpXy4Q8/QY2k+fY7nZH8CARy+hkbG+SGAovmzzuauCpBlb8FrnBA=="; }; }; - "socks-proxy-agent-5.0.0" = { + "socks-proxy-agent-5.0.1" = { name = "socks-proxy-agent"; packageName = "socks-proxy-agent"; - version = "5.0.0"; + version = "5.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/socks-proxy-agent/-/socks-proxy-agent-5.0.0.tgz"; - sha512 = "lEpa1zsWCChxiynk+lCycKuC502RxDWLKJZoIhnxrWNjLSDGYRFflHA1/228VkRcnv9TIb8w98derGbpKxJRgA=="; + url = "https://registry.npmjs.org/socks-proxy-agent/-/socks-proxy-agent-5.0.1.tgz"; + sha512 = "vZdmnjb9a2Tz6WEQVIurybSwElwPxMZaIc7PzqbJTrezcKNznv6giT7J7tZDZ1BojVaa1jvO/UiUdhDVB0ACoQ=="; }; }; "socks5-client-1.2.8" = { @@ -53771,13 +53762,13 @@ let sha512 = "0rfBDPVLzvDbMUKrFWvF6kvtXxllXGZRkFL0aCWJ5y8uXlEfZDo6IEPACZwJbKt/fGqFjJLJRHnG62vJmLLpRA=="; }; }; - "spiro-2.0.0" = { + "spiro-3.0.0" = { name = "spiro"; packageName = "spiro"; - version = "2.0.0"; + version = "3.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/spiro/-/spiro-2.0.0.tgz"; - sha512 = "KPWXN+OmQdjZPCMGRkE2hsbcY4Y4UJxjn+qTw4rsJ49n8VN6EqPk0UOOkNihXEl3JEqPQxcrDQebu9YPn9Ad4w=="; + url = "https://registry.npmjs.org/spiro/-/spiro-3.0.0.tgz"; + sha512 = "UEhtLWA8fDQuExOKpT3FLa7Rk238G5Bm3wGAxbvnah3H2X6yEL4blIkAsc38wNwMXBwQFRYE6l0Q9X0t1izOxA=="; }; }; "split-0.2.10" = { @@ -54050,13 +54041,13 @@ let sha512 = "pJAFizB6OcuJLX4RJJuU9HWyPwM2CqLi/vs08lhVIR3TGxacxpavvK5LzbxT+Y3iWkBchOTKS5hHCigA5aaung=="; }; }; - "ssb-db2-2.1.2" = { + "ssb-db2-2.1.3" = { name = "ssb-db2"; packageName = "ssb-db2"; - version = "2.1.2"; + version = "2.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/ssb-db2/-/ssb-db2-2.1.2.tgz"; - sha512 = "FrH++v1qyoCVq9ykuyjvzvsjNEX8mpqY8DRt0bOvIENOeWTWHCA6AXlP8d6LU39CGlwjw6ftlZr4ObizYH4zSQ=="; + url = "https://registry.npmjs.org/ssb-db2/-/ssb-db2-2.1.3.tgz"; + sha512 = "neA96dzAzxuH5/btqtbZ3h3RoWVdAT4b8rJrK/oZPfaOHMkQHL75IBuviTqkgfXoMqx1exegt4AI4bVroCJPmg=="; }; }; "ssb-ebt-5.6.7" = { @@ -54068,13 +54059,13 @@ let sha512 = "ifPgPNmDE8EKuuoqtXibwgYNtDZNry7sJL1epSUb3XgQr62bUV31N9R5LHKDsI2kx96OgWRwWY2PfZ7vf/hU8Q=="; }; }; - "ssb-friends-4.4.5" = { + "ssb-friends-4.4.7" = { name = "ssb-friends"; packageName = "ssb-friends"; - version = "4.4.5"; + version = "4.4.7"; src = fetchurl { - url = "https://registry.npmjs.org/ssb-friends/-/ssb-friends-4.4.5.tgz"; - sha512 = "XTGmXoqSm/U+A4WxNTTr3+yLdQk2sZUtvqdAFUPqzIVHmF3loji7IgyFRdEAk7wC2pY4N29YsYE2/qpRvu576Q=="; + url = "https://registry.npmjs.org/ssb-friends/-/ssb-friends-4.4.7.tgz"; + sha512 = "WPdHEWsAl9zMjbqQoFP++7UBi/lCKxiR0c8Qe2HHHoWIw58iVLSpepbNlZFwiZP4mPK5v2XaoYLOj7s3/UKj2w=="; }; }; "ssb-git-0.5.0" = { @@ -54329,13 +54320,13 @@ let sha512 = "zZ/Q1M+9ZWlrchgh4QauD/MEUFa6eC6H6FYq6T8Of/y82JqsQBLwN6YlzbO09evE7Rx6x0oliXDCnQSjwGwQRA=="; }; }; - "sscaff-1.2.0" = { + "sscaff-1.2.10" = { name = "sscaff"; packageName = "sscaff"; - version = "1.2.0"; + version = "1.2.10"; src = fetchurl { - url = "https://registry.npmjs.org/sscaff/-/sscaff-1.2.0.tgz"; - sha512 = "Xyf2tWLnO0Z297FKag0e8IXFIpnYRWZ3FBn4dN2qlMRsOcpf0P54FPhvdcb1Es0Fm4hbhYYXa23jR+VPGPQhSg=="; + url = "https://registry.npmjs.org/sscaff/-/sscaff-1.2.10.tgz"; + sha512 = "okh9hLxPkZl22XpK+4rLOnR3SHG2hEI92KKevDI8e6wZPIP5Dgsxx8RQUogdm3/a87kgyoWaCoOABekYIeXx9g=="; }; }; "ssh-config-1.1.6" = { @@ -54590,13 +54581,13 @@ let sha512 = "/Kz55rgUIv2KP2MKphwYT/NCuSfAlbbMRv2ZWw7wyXayu230zdtzhxxuXXcvsc6EmmhS8bSJl3uS1wmMHFumbA=="; }; }; - "statsd-client-0.4.6" = { + "statsd-client-0.4.7" = { name = "statsd-client"; packageName = "statsd-client"; - version = "0.4.6"; + version = "0.4.7"; src = fetchurl { - url = "https://registry.npmjs.org/statsd-client/-/statsd-client-0.4.6.tgz"; - sha512 = "OL3PAf0LhlFP8ZpxFm3Ue7dL3cV5o7PAsWDsQnx/iKXGVr8huYF/ui+OZEORerEDVRps7BCPAq5bWppMj1oMoA=="; + url = "https://registry.npmjs.org/statsd-client/-/statsd-client-0.4.7.tgz"; + sha512 = "+sGCE6FednJ/vI7vywErOg/mhVqmf6Zlktz7cdGRnF/cQWXD9ifMgtqU1CIIXmhSwm11SCk4zDN+bwNCvIR/Kg=="; }; }; "statuses-1.4.0" = { @@ -55724,13 +55715,13 @@ let sha512 = "cm7TQq9I8dA5LKUr+r8W7RzQlLsmTdCr6wXmjYueOoh/bQu55ODEw7GFhT42pUyoaLtO2rgmx1+8cSIjY9lR9g=="; }; }; - "subscriptions-transport-ws-0.9.18" = { + "subscriptions-transport-ws-0.9.19" = { name = "subscriptions-transport-ws"; packageName = "subscriptions-transport-ws"; - version = "0.9.18"; + version = "0.9.19"; src = fetchurl { - url = "https://registry.npmjs.org/subscriptions-transport-ws/-/subscriptions-transport-ws-0.9.18.tgz"; - sha512 = "tztzcBTNoEbuErsVQpTN2xUNN/efAZXyCyL5m3x4t6SKrEiTL2N8SaKWBFWM4u56pL79ULif3zjyeq+oV+nOaA=="; + url = "https://registry.npmjs.org/subscriptions-transport-ws/-/subscriptions-transport-ws-0.9.19.tgz"; + sha512 = "dxdemxFFB0ppCLg10FTtRqH/31FNRL1y1BQv8209MK5I4CwALb7iihQg+7p65lFcIl8MHatINWBLOqpgU4Kyyw=="; }; }; "subscriptions-transport-ws-0.9.8" = { @@ -55904,15 +55895,6 @@ let sha512 = "QjVjwdXIt408MIiAqCX4oUKsgU2EqAGzs2Ppkm4aQYbjm+ZEWEcW4SfFNTr4uMNZma0ey4f5lgLrkB0aX0QMow=="; }; }; - "supports-color-6.0.0" = { - name = "supports-color"; - packageName = "supports-color"; - version = "6.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/supports-color/-/supports-color-6.0.0.tgz"; - sha512 = "on9Kwidc1IUQo+bQdhi8+Tijpo0e1SS6RoGo2guUwn5vdaxw8RXOF9Vb2ws+ihWOmh4JnCJOvaziZWP1VABaLg=="; - }; - }; "supports-color-6.1.0" = { name = "supports-color"; packageName = "supports-color"; @@ -55958,13 +55940,13 @@ let sha512 = "6sXEzV5+I5j8Bmq9/vUphGRM/RJNT9SCURJLjwfOg51heRtguGWDzcaBlgAzKhQa0EVNpPEKzQuBwZ8S8WaCeQ=="; }; }; - "svelte-3.38.2" = { + "svelte-3.38.3" = { name = "svelte"; packageName = "svelte"; - version = "3.38.2"; + version = "3.38.3"; src = fetchurl { - url = "https://registry.npmjs.org/svelte/-/svelte-3.38.2.tgz"; - sha512 = "q5Dq0/QHh4BLJyEVWGe7Cej5NWs040LWjMbicBGZ+3qpFWJ1YObRmUDZKbbovddLC9WW7THTj3kYbTOFmU9fbg=="; + url = "https://registry.npmjs.org/svelte/-/svelte-3.38.3.tgz"; + sha512 = "N7bBZJH0iF24wsalFZF+fVYMUOigaAUQMIcEKHO3jstK/iL8VmP9xE+P0/a76+FkNcWt+TDv2Gx1taUoUscrvw=="; }; }; "svelte-preprocess-4.7.3" = { @@ -55976,13 +55958,13 @@ let sha512 = "Zx1/xLeGOIBlZMGPRCaXtlMe4ZA0faato5Dc3CosEqwu75MIEPuOstdkH6cy+RYTUYynoxzNaDxkPX4DbrPwRA=="; }; }; - "svelte2tsx-0.2.0" = { + "svelte2tsx-0.3.0" = { name = "svelte2tsx"; packageName = "svelte2tsx"; - version = "0.2.0"; + version = "0.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/svelte2tsx/-/svelte2tsx-0.2.0.tgz"; - sha512 = "gag/5eqXOMfeHkPWbioEz2kk01KJpG2ZVxYMV35EWMGpxR4m6jzgNPkl7bYp5fEOuHQ99muyVQFIedu4wjgmZw=="; + url = "https://registry.npmjs.org/svelte2tsx/-/svelte2tsx-0.3.0.tgz"; + sha512 = "q3Ss5Fd/PlaMlb61fNtFeKZCzc3rpkHsdLQEiYoRTOqhGqFPjTE8BD287uevtPh5NdouC1RX8u0i6Bv63zrBXA=="; }; }; "sver-compat-1.5.0" = { @@ -56012,13 +55994,13 @@ let sha1 = "58f71cee3bd519b59d4b2a843b6c7de64ac04764"; }; }; - "svg2img-0.9.2" = { + "svg2img-0.9.3" = { name = "svg2img"; packageName = "svg2img"; - version = "0.9.2"; + version = "0.9.3"; src = fetchurl { - url = "https://registry.npmjs.org/svg2img/-/svg2img-0.9.2.tgz"; - sha512 = "sjyUgQhfEPJpBRTGxqI9bRzE+3k41Nzc7OtcHSSko96i/EQJZAisdxyhk12Ho/mDVCsb1QsVHLbevbxrFC6onQ=="; + url = "https://registry.npmjs.org/svg2img/-/svg2img-0.9.3.tgz"; + sha512 = "xuBToDg/iFg0T8dhMTpu8CGfnsinswF2zgBa22HbcK6fSAKkl/bsX84qbic50kA4McKTLK5QZ+fzavy8quEIVA=="; }; }; "svgo-0.6.6" = { @@ -56129,31 +56111,22 @@ let sha512 = "xk5CMbwoQVI53rTq9o/iMojAqXP5NT4/+TMeTP4uXWDIH18pB9AXgO5Olqt0RXuf3jH032DA4DS4qzem6XdXAw=="; }; }; - "swagger-ui-dist-3.49.0" = { + "swagger-ui-dist-3.50.0" = { name = "swagger-ui-dist"; packageName = "swagger-ui-dist"; - version = "3.49.0"; + version = "3.50.0"; src = fetchurl { - url = "https://registry.npmjs.org/swagger-ui-dist/-/swagger-ui-dist-3.49.0.tgz"; - sha512 = "R1+eT16XNP1bBLfacISifZAkFJlpwvWsS2vVurF5pbIFZnmCasD/hj+9r/q7urYdQyb0B6v11mDnuYU7rUpfQg=="; + url = "https://registry.npmjs.org/swagger-ui-dist/-/swagger-ui-dist-3.50.0.tgz"; + sha512 = "BklniOBPlvZ6M9oGkhUwOf5HvxhkHBIycXN3ndju8WlLmi1xfMSdOA2AR6pNswlwURzsZUe1rh80aUyjnpD+Zw=="; }; }; - "swagger2openapi-6.2.3" = { + "swagger2openapi-7.0.7" = { name = "swagger2openapi"; packageName = "swagger2openapi"; - version = "6.2.3"; + version = "7.0.7"; src = fetchurl { - url = "https://registry.npmjs.org/swagger2openapi/-/swagger2openapi-6.2.3.tgz"; - sha512 = "cUUktzLpK69UwpMbcTzjMw2ns9RZChfxh56AHv6+hTx3StPOX2foZjPgds3HlJcINbxosYYBn/D3cG8nwcCWwQ=="; - }; - }; - "swagger2openapi-7.0.6" = { - name = "swagger2openapi"; - packageName = "swagger2openapi"; - version = "7.0.6"; - src = fetchurl { - url = "https://registry.npmjs.org/swagger2openapi/-/swagger2openapi-7.0.6.tgz"; - sha512 = "VIT414koe0eJqre0KrhNMUB7QEUfPjGAKesPZZosIKr2rxZ6vpUoersHUFNOsN/OZ5u2zsniCslBOwVcmQZwlg=="; + url = "https://registry.npmjs.org/swagger2openapi/-/swagger2openapi-7.0.7.tgz"; + sha512 = "uQMHn9Q1gOte13xarNTRtK00K3VgoLydwB3QMHcEptp8e8Q/idynMq+n1gTTf6U9BVcjfrbKXUpfyv/z/RLvQA=="; }; }; "sway-1.0.0" = { @@ -56282,6 +56255,15 @@ let sha512 = "33+lQwlLxXoxy0o9WLOgw8OjbXeS3Jv+pSl+nxKc2AOClBI28HsdRPpH0u9Xa9OVjHLT9vonnOMw1ug7YXI0dA=="; }; }; + "systeminformation-5.7.7" = { + name = "systeminformation"; + packageName = "systeminformation"; + version = "5.7.7"; + src = fetchurl { + url = "https://registry.npmjs.org/systeminformation/-/systeminformation-5.7.7.tgz"; + sha512 = "aQ7MBeVI2MKPYOi3YJAoZ45JVlRkBA7IXoqGgtVBamvtE0I6JLOyJzD/VVc9pnMXDb3yqaMwssAjhwtJax4/Rw=="; + }; + }; "table-3.8.3" = { name = "table"; packageName = "table"; @@ -56318,15 +56300,6 @@ let sha512 = "wmEc8m4fjnob4gt5riFRtTu/6+4rSe12TpAELNSqHMfF3IqnA+CH37USM6/YR3qRZv7e56kAEAtd6nKZaxe0Ug=="; }; }; - "table-6.7.0" = { - name = "table"; - packageName = "table"; - version = "6.7.0"; - src = fetchurl { - url = "https://registry.npmjs.org/table/-/table-6.7.0.tgz"; - sha512 = "SAM+5p6V99gYiiy2gT5ArdzgM1dLDed0nkrWmG6Fry/bUS/m9x83BwpJUOf1Qj/x2qJd+thL6IkIx7qPGRxqBw=="; - }; - }; "table-6.7.1" = { name = "table"; packageName = "table"; @@ -56400,13 +56373,13 @@ let sha1 = "7cbcb64b5a141b6a2efc2c5d2c67b4e150b2a268"; }; }; - "tail-2.2.2" = { + "tail-2.2.3" = { name = "tail"; packageName = "tail"; - version = "2.2.2"; + version = "2.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/tail/-/tail-2.2.2.tgz"; - sha512 = "IlfiFF8g5sPAqIZEL3qkIFcjODBM5DqdkVUhwXdKSDYqOgXGL4Gu0Hh1UQWXdCW5gBHi52cnk9WWMowsfjF4XA=="; + url = "https://registry.npmjs.org/tail/-/tail-2.2.3.tgz"; + sha512 = "XbBmVsJZ636kncPew2Y+pOxOsb9GsNFZ1bcAGCDn23ME/JPJ+TImZYjnqBnMLdw+K11Hql5ZgiUQmRvDHaFc6w=="; }; }; "taketalk-1.0.0" = { @@ -56526,6 +56499,15 @@ let sha512 = "NvCeXpYx7OsmOh8zIOP/ebG55zZmxLE0etfWRbWok+q2Qo8x/vOR/IJT1taADXPe+jsiu9axDb3X4B+iIgNlKw=="; }; }; + "tar-fs-2.0.0" = { + name = "tar-fs"; + packageName = "tar-fs"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/tar-fs/-/tar-fs-2.0.0.tgz"; + sha512 = "vaY0obB6Om/fso8a8vakQBzwholQ7v5+uy+tF3Ozvxv1KNezmVQAiWtcNmMHFSFPqL3dJA8ha6gdtFbfX9mcxA=="; + }; + }; "tar-fs-2.1.1" = { name = "tar-fs"; packageName = "tar-fs"; @@ -56706,15 +56688,6 @@ let sha512 = "HIeWmj77uOOHb0QX7siN3OtwV3CTntquin6TNVg6SHOqCP3hYKmox90eeFOGaY1MqJ9WYDDjkyZrW6qS5AWpbw=="; }; }; - "tempfile-2.0.0" = { - name = "tempfile"; - packageName = "tempfile"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/tempfile/-/tempfile-2.0.0.tgz"; - sha1 = "6b0446856a9b1114d1856ffcbe509cccb0977265"; - }; - }; "tempy-0.2.1" = { name = "tempy"; packageName = "tempy"; @@ -57732,15 +57705,6 @@ let sha512 = "RqtHvVffaf+ORMlpFjEWh3czDy6Q5wFfdGq9JXVBXu2L8/ssjDTnong8f1+I2xWGlKslXUkHU7m1HBj6MyoLqw=="; }; }; - "too-wordy-0.1.6" = { - name = "too-wordy"; - packageName = "too-wordy"; - version = "0.1.6"; - src = fetchurl { - url = "https://registry.npmjs.org/too-wordy/-/too-wordy-0.1.6.tgz"; - sha512 = "MV5F74YF9+UYsvwXGXTh+5YP3EqH/ivwWfyFE2/YHWQQxm9jDPmkIC23nkN133Ye4nO3HTXmiMcfGqJ5xRPfOA=="; - }; - }; "too-wordy-0.3.4" = { name = "too-wordy"; packageName = "too-wordy"; @@ -57948,13 +57912,13 @@ let sha1 = "8a7e8ab3044ad19f233f50c15894cbf69e5d205e"; }; }; - "trash-7.1.1" = { + "trash-7.2.0" = { name = "trash"; packageName = "trash"; - version = "7.1.1"; + version = "7.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/trash/-/trash-7.1.1.tgz"; - sha512 = "iG43vKNh4Q540RrfefjSxll6hkqc2t6tAM1AfikXUXbW6O7jEKftMQZho6dg6VLUWng/uWu4brGrvE9a0uQbOQ=="; + url = "https://registry.npmjs.org/trash/-/trash-7.2.0.tgz"; + sha512 = "3bR8Z5aWO8b9qybS6skBoaavH/hX9Onb1RrdIIhJxv9VpH3aBtpbKuAX4rIh/0xpDZ7K4ga36wONk/okbhjTlA=="; }; }; "traverse-0.3.9" = { @@ -58164,15 +58128,6 @@ let sha512 = "uEtWkFM/sdZvRNNDL3Ehu4WVpwaulhwQszV8mrtcdeE8nN00BV9mAmQ88RkrBhFgl9gMgvjJLAQcZbnPXI9mlA=="; }; }; - "ts-loader-6.2.2" = { - name = "ts-loader"; - packageName = "ts-loader"; - version = "6.2.2"; - src = fetchurl { - url = "https://registry.npmjs.org/ts-loader/-/ts-loader-6.2.2.tgz"; - sha512 = "HDo5kXZCBml3EUPcc7RlZOV/JGlLHwppTLEHb3SHnr5V7NXD4klMEkrhJe5wgRbaWsSXi+Y1SIBN/K9B6zWGWQ=="; - }; - }; "ts-loader-8.0.4" = { name = "ts-loader"; packageName = "ts-loader"; @@ -58182,6 +58137,15 @@ let sha512 = "5u8KF1SW8eCUb/Ff7At81e3wznPmT/27fvaGRO9CziVy+6NlPVRvrzSox4OwU0/e6OflOUB32Err4VquysCSAQ=="; }; }; + "ts-loader-8.3.0" = { + name = "ts-loader"; + packageName = "ts-loader"; + version = "8.3.0"; + src = fetchurl { + url = "https://registry.npmjs.org/ts-loader/-/ts-loader-8.3.0.tgz"; + sha512 = "MgGly4I6cStsJy27ViE32UoqxPTN9Xly4anxxVyaIWR+9BGxboV4EyJBGfR3RePV7Ksjj3rHmPZJeIt+7o4Vag=="; + }; + }; "ts-log-2.2.3" = { name = "ts-log"; packageName = "ts-log"; @@ -58281,6 +58245,15 @@ let sha512 = "gS9GVHRU+RGn5KQM2rllAlR3dU6m7AcpJKdtH8gFvQiC4Otgk98XnmMU+nZenHt/+VhnBPWwgrJsyrdcw6i23w=="; }; }; + "tslib-2.3.0" = { + name = "tslib"; + packageName = "tslib"; + version = "2.3.0"; + src = fetchurl { + url = "https://registry.npmjs.org/tslib/-/tslib-2.3.0.tgz"; + sha512 = "N82ooyxVNm6h1riLCoyS9e3fuJ3AMG2zIZs2Gd1ATcSFjSA23Q0fzjjZeh0jbJvWVDZ0cJT8yaNNaaXHzueNjg=="; + }; + }; "tslint-5.20.1" = { name = "tslint"; packageName = "tslint"; @@ -58488,6 +58461,15 @@ let sha1 = "0762378f1dc1c050e48f666aca904e24b1a962f4"; }; }; + "tx2-1.0.4" = { + name = "tx2"; + packageName = "tx2"; + version = "1.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/tx2/-/tx2-1.0.4.tgz"; + sha512 = "rU+y30nUY3PyIi+znvv74HzxlpULKwMPAyRK+YiCjvGkk3rY3fic3D6Z+avLpun3V5A6HFwPQ9JrBTMNEV/dxg=="; + }; + }; "txt-to-ast-3.0.3" = { name = "txt-to-ast"; packageName = "txt-to-ast"; @@ -58659,13 +58641,13 @@ let sha512 = "4dbzIzqvjtgiM5rw1k5rEHtBANKmdudhGyBEajN01fEyhaAIhsoKNy6y7+IN93IfpFtwY9iqi7kD+xwKhQsNJA=="; }; }; - "type-fest-1.2.0" = { + "type-fest-1.2.1" = { name = "type-fest"; packageName = "type-fest"; - version = "1.2.0"; + version = "1.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/type-fest/-/type-fest-1.2.0.tgz"; - sha512 = "++0N6KyAj0t2webXst0PE0xuXb4Dv3z1Z+4SGzK+j/epeWBZCfkQbkW/ezscZwpinmBQ5wu/l4TqagKSVcAGCA=="; + url = "https://registry.npmjs.org/type-fest/-/type-fest-1.2.1.tgz"; + sha512 = "SbmIRuXhJs8KTneu77Ecylt9zuqL683tuiLYpTRil4H++eIhqCmx6ko6KAFem9dty8sOdnEiX7j4K1nRE628fQ=="; }; }; "type-is-1.6.18" = { @@ -58767,13 +58749,13 @@ let sha512 = "0RNDbSdEokBeEAkgNbxJ+BLwSManFy9TeXz8uW+48j/xhEXv1ePME60olyzw2XzUqUBNAYFeJadIqAgNqIACwg=="; }; }; - "typescript-3.9.9" = { + "typescript-3.9.10" = { name = "typescript"; packageName = "typescript"; - version = "3.9.9"; + version = "3.9.10"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-3.9.9.tgz"; - sha512 = "kdMjTiekY+z/ubJCATUPlRDl39vXYiMV9iyeMuEuXZh2we6zz80uovNN2WlAxmmdE/Z/YQe+EbOEXB5RHEED3w=="; + url = "https://registry.npmjs.org/typescript/-/typescript-3.9.10.tgz"; + sha512 = "w6fIxVE/H1PkLKcCPsFqKE7Kv7QUwhU8qQY2MueZXWx5cPZdwFupLgKK3vntcK98BtNHZtAF4LA/yl2a7k8R6Q=="; }; }; "typescript-4.0.3" = { @@ -58785,13 +58767,13 @@ let sha512 = "tEu6DGxGgRJPb/mVPIZ48e69xCn2yRmCgYmDugAVwmJ6o+0u1RI18eO7E7WBTLYLaEVVOhwQmcdhQHweux/WPg=="; }; }; - "typescript-4.1.5" = { + "typescript-4.1.6" = { name = "typescript"; packageName = "typescript"; - version = "4.1.5"; + version = "4.1.6"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-4.1.5.tgz"; - sha512 = "6OSu9PTIzmn9TCDiovULTnET6BgXtDYL4Gg4szY+cGsc3JP1dQL8qvE8kShTRx1NIw4Q9IBHlwODjkjWEtMUyA=="; + url = "https://registry.npmjs.org/typescript/-/typescript-4.1.6.tgz"; + sha512 = "pxnwLxeb/Z5SP80JDRzVjh58KsM6jZHRAOtTpS7sXLS4ogXNKC9ANxHHZqLLeVHZN35jCtI4JdmLLbLiC1kBow=="; }; }; "typescript-4.2.3" = { @@ -58803,13 +58785,13 @@ let sha512 = "qOcYwxaByStAWrBf4x0fibwZvMRG+r4cQoTjbPtUlrWjBHbmCAww1i448U0GJ+3cNNEtebDteo/cHOR3xJ4wEw=="; }; }; - "typescript-4.3.2" = { + "typescript-4.3.4" = { name = "typescript"; packageName = "typescript"; - version = "4.3.2"; + version = "4.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-4.3.2.tgz"; - sha512 = "zZ4hShnmnoVnAHpVHWpTcxdv7dWP60S2FsydQLV8V5PbS3FifjWFFRiHSWpDJahly88PRyV5teTSLoq4eG7mKw=="; + url = "https://registry.npmjs.org/typescript/-/typescript-4.3.4.tgz"; + sha512 = "uauPG7XZn9F/mo+7MrsRjyvbxFpzemRjKEZXS4AK83oP2KKOJPvb+9cO/gmnv8arWZvhnjVOXz7B49m1l0e9Ew=="; }; }; "typescript-eslint-parser-16.0.1" = { @@ -58857,13 +58839,13 @@ let sha1 = "5c080e5d661cbbe38259d2e70a3c7253e873881d"; }; }; - "typo-geom-0.11.2" = { + "typo-geom-0.12.1" = { name = "typo-geom"; packageName = "typo-geom"; - version = "0.11.2"; + version = "0.12.1"; src = fetchurl { - url = "https://registry.npmjs.org/typo-geom/-/typo-geom-0.11.2.tgz"; - sha512 = "ouK6sY+LNGDDQra+MEZb2ZYDaEkCUeutr6x8BZAGGGB0fCsR0wt6YIuz9DJoc8idQS8mnqY8npGmXcMsTZAXPA=="; + url = "https://registry.npmjs.org/typo-geom/-/typo-geom-0.12.1.tgz"; + sha512 = "W20RYp2OCEGMhEYayR0cAP67AUWiGRUufMs6Clul7MAmu5SpLuOG/RWk7+LkL65wsugcfhPQlFEJ231C2xHNQg=="; }; }; "ua-parser-js-0.7.21" = { @@ -58911,13 +58893,13 @@ let sha512 = "otIc7O9LyxpUcQoXzj2hL4LPWKklO6LJWoJUzNa8A17Xgi4fOeDC8FBDOLHnC/Slo1CQgsZMcM6as0M76BZaig=="; }; }; - "uglify-js-3.13.8" = { + "uglify-js-3.13.9" = { name = "uglify-js"; packageName = "uglify-js"; - version = "3.13.8"; + version = "3.13.9"; src = fetchurl { - url = "https://registry.npmjs.org/uglify-js/-/uglify-js-3.13.8.tgz"; - sha512 = "PvFLMFIQHfIjFFlvAch69U2IvIxK9TNzNWt1SxZGp9JZ/v70yvqIQuiJeVPPtUMOzoNt+aNRDk4wgxb34wvEqA=="; + url = "https://registry.npmjs.org/uglify-js/-/uglify-js-3.13.9.tgz"; + sha512 = "wZbyTQ1w6Y7fHdt8sJnHfSIuWeDgk6B5rCb4E/AM6QNNPbOMIZph21PW5dRB3h7Df0GszN+t7RuUH6sWK5bF0g=="; }; }; "uglify-js-3.4.10" = { @@ -59064,6 +59046,15 @@ let sha512 = "tZU/3NqK3dA5gpE1KtyiJUrEB0lxnGkMFHptJ7q6ewdZ8s12QrODwNbhIJStmJkd1QDXa1NRA8aF2A1zk/Ypyw=="; }; }; + "unbzip2-stream-1.3.3" = { + name = "unbzip2-stream"; + packageName = "unbzip2-stream"; + version = "1.3.3"; + src = fetchurl { + url = "https://registry.npmjs.org/unbzip2-stream/-/unbzip2-stream-1.3.3.tgz"; + sha512 = "fUlAF7U9Ah1Q6EieQ4x4zLNejrRvDWUYmxXUpN3uziFYCHapjWFaCAnreY9bGgxzaMCFAPPpYNng57CypwJVhg=="; + }; + }; "unbzip2-stream-1.4.3" = { name = "unbzip2-stream"; packageName = "unbzip2-stream"; @@ -60235,13 +60226,13 @@ let sha512 = "3XZZuJSeoIUyMYSuDbTbVtP4KAVGHPfU8nmHFkr8LJc+THCaUXwnu/2AV+LCSLarET/hL9IlbNfYTGrt6fOVuQ=="; }; }; - "ut_pex-3.0.0" = { + "ut_pex-3.0.1" = { name = "ut_pex"; packageName = "ut_pex"; - version = "3.0.0"; + version = "3.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/ut_pex/-/ut_pex-3.0.0.tgz"; - sha512 = "huPZAVpXzqUmCSGdeALwnoH29V+bK0O9ISH4jNfvlGFhY8qMJF0I+RKfVMiiT0TlgeB6thiitz/0G9BORVRb6Q=="; + url = "https://registry.npmjs.org/ut_pex/-/ut_pex-3.0.1.tgz"; + sha512 = "t1MHIDHSISgOJcmq8UM6Qv9/hRQYVaUvzqSNnXa5ATDbS9hXfhBpyBo2HcSyJtwPSHsmMtNui8G6yKirwJ8vow=="; }; }; "utf-8-validate-1.2.2" = { @@ -60460,13 +60451,13 @@ let sha512 = "vRAKaS8WcYNgzbxyH2LdheqgL4sQLis8LXl7r/mN+O4mpWlUpoCsTtietxepLrft2q0TFA2gaIvSWN1iRkzW/w=="; }; }; - "utp-native-2.5.0" = { + "utp-native-2.5.1" = { name = "utp-native"; packageName = "utp-native"; - version = "2.5.0"; + version = "2.5.1"; src = fetchurl { - url = "https://registry.npmjs.org/utp-native/-/utp-native-2.5.0.tgz"; - sha512 = "HoHPE6gwLxC0xlpYJUl+Xw2sh809lhXx3TexHsb2/xY8vEd6NwuvAxOI/X27dBTc/TOT5diWUpCJWDaunkcVvA=="; + url = "https://registry.npmjs.org/utp-native/-/utp-native-2.5.1.tgz"; + sha512 = "wbrJwR8DZx8N9s1ffTcMuBK7tMBQ9tvKpIL+mWHrDvGUYfV7ivroEGFTXUr4meqy/PVbUdMfURSoBbwuGtt/YQ=="; }; }; "uuid-2.0.3" = { @@ -61360,13 +61351,13 @@ let sha512 = "gQpnTgkubC6hQgdIcRdYGDSDc+SaujOdyesZQMv6JlfQee/9Mp0Qhnys6WxDWvQnL5WZdT7o2Ul187aSt0Rq+w=="; }; }; - "vls-0.7.2" = { + "vls-0.7.4" = { name = "vls"; packageName = "vls"; - version = "0.7.2"; + version = "0.7.4"; src = fetchurl { - url = "https://registry.npmjs.org/vls/-/vls-0.7.2.tgz"; - sha512 = "9nKgSPtNxQlc32K5GgZV++MdsCpNuac/SfxnEmVI0DCF4E0Uekj+RUo7Zk6NnA4veiNMN+AEjAIlbXYWPHgX6Q=="; + url = "https://registry.npmjs.org/vls/-/vls-0.7.4.tgz"; + sha512 = "uU5HCIK5vX096eMA5fBwyR7tv36m1Ssy910w5ILT5OvCUTXgBR58gZRJWrL2HxCyG8oYXC+oFWjhJc7+ExBUgQ=="; }; }; "vm-browserify-1.1.2" = { @@ -61405,13 +61396,13 @@ let sha1 = "614f7fbf8d801f0bb5f0661f5b2f5785750e4f09"; }; }; - "vsce-1.91.0" = { + "vsce-1.88.0" = { name = "vsce"; packageName = "vsce"; - version = "1.91.0"; + version = "1.88.0"; src = fetchurl { - url = "https://registry.npmjs.org/vsce/-/vsce-1.91.0.tgz"; - sha512 = "y75QryWKzAw5KIR4NFEXc6XAy/Er1BHXdNwAESgKKFw8Yc8cA/+dP4Gj7VYhNPOJlV0v5j1in/cPkLFZAqC7cQ=="; + url = "https://registry.npmjs.org/vsce/-/vsce-1.88.0.tgz"; + sha512 = "FS5ou3G+WRnPPr/tWVs8b/jVzeDacgZHy/y7/QQW7maSPFEAmRt2bFGUJtJVEUDLBqtDm/3VGMJ7D31cF2U1tw=="; }; }; "vscode-css-languageservice-3.0.13" = { @@ -61495,6 +61486,15 @@ let sha512 = "UmC+GS0IqBeZnOAmdtQvaDzoH1c5/un+b7qALUziu/Y4SOPXso5dF+YkJeTqsde6YU2pLm78RtMDzl9BParwbw=="; }; }; + "vscode-json-languageserver-1.3.4" = { + name = "vscode-json-languageserver"; + packageName = "vscode-json-languageserver"; + version = "1.3.4"; + src = fetchurl { + url = "https://registry.npmjs.org/vscode-json-languageserver/-/vscode-json-languageserver-1.3.4.tgz"; + sha512 = "+ghebnslXk6fVDySBrT0BVqozLDdmKY/qxgkDD4JtOQcU2vXc3e7jh7YyMxvuvE93E9OLvBqUrvajttj8xf3BA=="; + }; + }; "vscode-json-languageservice-3.11.0" = { name = "vscode-json-languageservice"; packageName = "vscode-json-languageservice"; @@ -61576,6 +61576,15 @@ let sha512 = "nkiNDGI+Ytp7uj1lxHXddXCoEunhcry1D+KmVHBfUUgWT9jMF8ZJyH5KQObdF+OGAh7bXZxD/SV4uGwSCeHHWA=="; }; }; + "vscode-jsonrpc-7.0.0-next.1" = { + name = "vscode-jsonrpc"; + packageName = "vscode-jsonrpc"; + version = "7.0.0-next.1"; + src = fetchurl { + url = "https://registry.npmjs.org/vscode-jsonrpc/-/vscode-jsonrpc-7.0.0-next.1.tgz"; + sha512 = "dEmliPZGbSyIcEeKRGzosCy7y7zsc8FXg1l5BBOGgMUbemlo3vUnsa2GFqpILJwJvlbvkRcF2QASNwIlKe9J7g=="; + }; + }; "vscode-languageclient-4.0.1" = { name = "vscode-languageclient"; packageName = "vscode-languageclient"; @@ -61585,13 +61594,13 @@ let sha512 = "0fuBZj9pMkeJ8OMyIvSGeRaRVhUaJt+yeFxi7a3sz/AbrngQdcxOovMXPgKuieoBSBKS05gXPS88BsWpJZfBkA=="; }; }; - "vscode-languageclient-7.1.0-next.4" = { + "vscode-languageclient-7.1.0-next.5" = { name = "vscode-languageclient"; packageName = "vscode-languageclient"; - version = "7.1.0-next.4"; + version = "7.1.0-next.5"; src = fetchurl { - url = "https://registry.npmjs.org/vscode-languageclient/-/vscode-languageclient-7.1.0-next.4.tgz"; - sha512 = "Gal+DvbI1KIwO1z90MvSnghMCVBCGlwdpOVIS0Hhmep7rjHUOwuC5Df7YlVkpzfPm+RCRyZQnUSJ19VNrnxxhA=="; + url = "https://registry.npmjs.org/vscode-languageclient/-/vscode-languageclient-7.1.0-next.5.tgz"; + sha512 = "TpzpAhpdCNJHaLzptFRs54xsU6xTmaiVPCse0W0rRB5jJBPjOBKilrFPMMm/sJA0y8Yxa9sOvZaNu6WPg3dYAw=="; }; }; "vscode-languageserver-3.5.1" = { @@ -61720,6 +61729,15 @@ let sha512 = "LFZ6WMB3iPezQAU9OnGoERzcIVKhcs0OLfD/NHcqSj3g1wgxuLUL5kSlZbbjFySQCmhzm6b0yb3hjTSeBtq1+w=="; }; }; + "vscode-languageserver-protocol-3.17.0-next.6" = { + name = "vscode-languageserver-protocol"; + packageName = "vscode-languageserver-protocol"; + version = "3.17.0-next.6"; + src = fetchurl { + url = "https://registry.npmjs.org/vscode-languageserver-protocol/-/vscode-languageserver-protocol-3.17.0-next.6.tgz"; + sha512 = "f1kGsoOpISB5jSqQNeMDl2446enxVahyux2e5vZap6pu/TC+2UlvPT4DCR0gPph95KOQZweL9zq1SzLoPdqhuA=="; + }; + }; "vscode-languageserver-protocol-3.5.1" = { name = "vscode-languageserver-protocol"; packageName = "vscode-languageserver-protocol"; @@ -61810,6 +61828,15 @@ let sha512 = "VGzh06oynbYa6JbTKUbxOEZN7CYEtWhN7DK5wfzUpeCJl8X8xZX39g2PVfpqXrIEduu7dcJgK007KgnX9tHNKA=="; }; }; + "vscode-languageserver-types-3.17.0-next.2" = { + name = "vscode-languageserver-types"; + packageName = "vscode-languageserver-types"; + version = "3.17.0-next.2"; + src = fetchurl { + url = "https://registry.npmjs.org/vscode-languageserver-types/-/vscode-languageserver-types-3.17.0-next.2.tgz"; + sha512 = "L5S2kNLCgYJMVWgsZjBaorMM/6+itAfvOyl6Kv1bgFzDNaUKm9HsnUlehjpWPdV5DqnfJhJ5E03Z+/3Mw8ii+Q=="; + }; + }; "vscode-languageserver-types-3.5.0" = { name = "vscode-languageserver-types"; packageName = "vscode-languageserver-types"; @@ -61918,13 +61945,13 @@ let sha1 = "13587190f34e72ba7a07ebbaa7e70ac147b1fb7d"; }; }; - "vue-2.6.12" = { + "vue-2.6.14" = { name = "vue"; packageName = "vue"; - version = "2.6.12"; + version = "2.6.14"; src = fetchurl { - url = "https://registry.npmjs.org/vue/-/vue-2.6.12.tgz"; - sha512 = "uhmLFETqPPNyuLLbsKz6ioJ4q7AZHzD8ZVFNATNyICSZouqP2Sz0rotWQC8UNBF6VGSCs5abnKJoStA6JbCbfg=="; + url = "https://registry.npmjs.org/vue/-/vue-2.6.14.tgz"; + sha512 = "x2284lgYvjOMj3Za7kqzRcUSxBboHqtgRE2zlos1qWaOye5yUmHn42LB1250NJBLRwEcdrB0JRwyPTEPhfQjiQ=="; }; }; "vue-codemod-0.0.5" = { @@ -62125,22 +62152,22 @@ let sha1 = "79331f666366b3b1c6ab02ceb04bad8dd2eebb0c"; }; }; - "wavedrom-2.6.9" = { + "wavedrom-2.8.1" = { name = "wavedrom"; packageName = "wavedrom"; - version = "2.6.9"; + version = "2.8.1"; src = fetchurl { - url = "https://registry.npmjs.org/wavedrom/-/wavedrom-2.6.9.tgz"; - sha512 = "EXBubejy7GrzibGLJ6OXH5HAP7KbA62gXMm8FvqJH0W5S05D6pgqdnRG20KP1w/WSY+zqdVIkiHNxwgquPbs2w=="; + url = "https://registry.npmjs.org/wavedrom/-/wavedrom-2.8.1.tgz"; + sha512 = "UTU27qnkfv+qLCwilm+T+m6zcPzSFP7i5HgtZkihbDeVIUasa3npnWhK3ogJ6gmOYhTK1lIh8KDztEuod2CM/g=="; }; }; - "wawoff2-1.0.2" = { + "wawoff2-2.0.0" = { name = "wawoff2"; packageName = "wawoff2"; - version = "1.0.2"; + version = "2.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/wawoff2/-/wawoff2-1.0.2.tgz"; - sha512 = "qxuTwf5tAP/XojrRc6cmR0hGvqgD3XUxv2fzfzURKPDfE7AeHmtRuankVxdJ4DRdSKXaE5QlyJT49yBis2vb6Q=="; + url = "https://registry.npmjs.org/wawoff2/-/wawoff2-2.0.0.tgz"; + sha512 = "5gjFj+fyQO9cMrg5vYaVM7+T37xSHpqUWM/S6UCEiBx8wRmfpvuhYjPM3toB2UujpmWQt1hSPKRo/jIRE/j9Eg=="; }; }; "wbuf-1.7.3" = { @@ -62287,6 +62314,15 @@ let sha512 = "1xllYVmA4dIvRjHzwELgW4KjIU1fW4PEuEnjsylz7k7H5HgPOctIq7W1jrt3sKH9yG5d72//XWzsHhfoWvsQVg=="; }; }; + "webpack-5.40.0" = { + name = "webpack"; + packageName = "webpack"; + version = "5.40.0"; + src = fetchurl { + url = "https://registry.npmjs.org/webpack/-/webpack-5.40.0.tgz"; + sha512 = "c7f5e/WWrxXWUzQqTBg54vBs5RgcAgpvKE4F4VegVgfo4x660ZxYUF2/hpMkZUnLjgytVTitjeXaN4IPlXCGIw=="; + }; + }; "webpack-bundle-analyzer-3.9.0" = { name = "webpack-bundle-analyzer"; packageName = "webpack-bundle-analyzer"; @@ -62305,6 +62341,15 @@ let sha512 = "NVWBaz9k839ZH/sinurM+HcDvJOTXwSjYp1ku+5XKeOC03z8v5QitnK/x+lAxGXFyhdayoIf/GOpv85z3/xPag=="; }; }; + "webpack-cli-4.7.2" = { + name = "webpack-cli"; + packageName = "webpack-cli"; + version = "4.7.2"; + src = fetchurl { + url = "https://registry.npmjs.org/webpack-cli/-/webpack-cli-4.7.2.tgz"; + sha512 = "mEoLmnmOIZQNiRl0ebnjzQ74Hk0iKS5SiEEnpq3dRezoyR3yPaeQZCMCe+db4524pj1Pd5ghZXjT41KLzIhSLw=="; + }; + }; "webpack-core-0.6.9" = { name = "webpack-core"; packageName = "webpack-core"; @@ -62377,13 +62422,13 @@ let sha512 = "9S6YyKKKh/Oz/eryM1RyLVDVmy3NSPV0JXMRhZ18fJsq+AwGxUY34X54VNwkzYcEmEkDwNxuEOboCZEebJXBAQ=="; }; }; - "webpack-merge-5.7.3" = { + "webpack-merge-5.8.0" = { name = "webpack-merge"; packageName = "webpack-merge"; - version = "5.7.3"; + version = "5.8.0"; src = fetchurl { - url = "https://registry.npmjs.org/webpack-merge/-/webpack-merge-5.7.3.tgz"; - sha512 = "6/JUQv0ELQ1igjGDzHkXbVDRxkfA57Zw7PfiupdLFJYrgFqY5ZP8xxbpp2lU3EPwYx89ht5Z/aDkD40hFCm5AA=="; + url = "https://registry.npmjs.org/webpack-merge/-/webpack-merge-5.8.0.tgz"; + sha512 = "/SaI7xY0831XwP6kzuwhKWVKDP9t1QY1h65lAFLbZqMPIuYcD9QAW4u9STIbU9kaJbPBB/geU/gLr1wDjOhQ+Q=="; }; }; "webpack-node-externals-1.7.2" = { @@ -62467,13 +62512,13 @@ let sha512 = "OqedPIGOfsDlo31UNwYbCFMSaO9m9G/0faIHj5/dZFDMFqPTcx6UwqyOy3COEaEOg/9VsGIpdqn62W5KhoKSpg=="; }; }; - "webtorrent-1.0.0" = { + "webtorrent-1.0.1" = { name = "webtorrent"; packageName = "webtorrent"; - version = "1.0.0"; + version = "1.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/webtorrent/-/webtorrent-1.0.0.tgz"; - sha512 = 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+63205,15 @@ let sha512 = "toV7q9rWNYha963Pl/qyeZ6wG+3nnsyvolaNUS8+R5Wtw6qJPTxIlOP1ZSvcGhEJw+l3HMMmtiNo9Gl61G4GVg=="; }; }; + "workerpool-6.1.4" = { + name = "workerpool"; + packageName = "workerpool"; + version = "6.1.4"; + src = fetchurl { + url = "https://registry.npmjs.org/workerpool/-/workerpool-6.1.4.tgz"; + sha512 = "jGWPzsUqzkow8HoAvqaPWTUPCrlPJaJ5tY8Iz7n1uCz3tTp6s3CDG0FF1NsX42WNlkRSW6Mr+CDZGnNoSsKa7g=="; + }; + }; "wrap-ansi-2.1.0" = { name = "wrap-ansi"; packageName = "wrap-ansi"; @@ -63277,13 +63331,13 @@ let sha512 = "AvHcyZ5JnSfq3ioSyjrBkH9yW4m7Ayk8/9My/DD9onKeu/94fwrMocemO2QAJFAlnnDN+ZDS+ZjAR5ua1/PV/Q=="; }; }; - "write-good-0.11.3" = { + "write-good-1.0.8" = { name = "write-good"; packageName = "write-good"; - version = "0.11.3"; + version = "1.0.8"; src = fetchurl { - url = "https://registry.npmjs.org/write-good/-/write-good-0.11.3.tgz"; - sha512 = "fDKIHO5wCzTLCOGNJl1rzzJrZlTIzfZl8msOoJQZzRhYo0X/tFTm4+2B1zTibFYK01Nnd1kLZBjj4xjcFLePNQ=="; + url = "https://registry.npmjs.org/write-good/-/write-good-1.0.8.tgz"; + sha512 = "P1Ct7+DNrOcr2JAxDZ3Q5i5sx2LSveu7iLaoUL0A+YiG0GKf0l5+9j3rwMeyh6JeTL1+HfQV1rnwEvzhNIvpFw=="; }; }; "write-json-file-3.2.0" = { @@ -63349,13 +63403,13 @@ let sha512 = "nnWLa/NwZSt4KQJu51MYlCcSQ5g7INpOrOMt4XV8j4dqTXdmlUmSHQ8/oLC069ckre0fRsgfvsKwbTdtKLCDkA=="; }; }; - "ws-5.2.2" = { + "ws-5.2.3" = { name = "ws"; packageName = "ws"; - version = "5.2.2"; + version = "5.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/ws/-/ws-5.2.2.tgz"; - sha512 = "jaHFD6PFv6UgoIVda6qZllptQsMlDEJkTQcybzzXDYM1XO9Y8em691FGMPmM46WGyLU4z9KMgQN+qrux/nhlHA=="; + url = "https://registry.npmjs.org/ws/-/ws-5.2.3.tgz"; + sha512 = "jZArVERrMsKUatIdnLzqvcfydI85dvd/Fp1u/VOpfdDWQ4c9qWXe+VIeAbQ5FrDwciAkr+lzofXLz3Kuf26AOA=="; }; }; "ws-6.1.4" = { @@ -63376,31 +63430,13 @@ let sha512 = "GIyAXC2cB7LjvpgMt9EKS2ldqr0MTrORaleiOno6TweZ6r3TKtoFQWay/2PceJ3RuBasOHzXNn5Lrw1X0bEjqA=="; }; }; - "ws-7.2.5" = { + "ws-6.2.2" = { name = "ws"; packageName = "ws"; - version = "7.2.5"; + version = "6.2.2"; src = fetchurl { - url = "https://registry.npmjs.org/ws/-/ws-7.2.5.tgz"; - sha512 = "C34cIU4+DB2vMyAbmEKossWq2ZQDr6QEyuuCzWrM9zfw1sGc0mYiJ0UnG9zzNykt49C2Fi34hvr2vssFQRS6EA=="; - }; - }; - "ws-7.4.3" = { - name = "ws"; - packageName = "ws"; - version = "7.4.3"; - src = fetchurl { - url = "https://registry.npmjs.org/ws/-/ws-7.4.3.tgz"; - sha512 = "hr6vCR76GsossIRsr8OLR9acVVm1jyfEWvhbNjtgPOrfvAlKzvyeg/P6r8RuDjRyrcQoPQT7K0DGEPc7Ae6jzA=="; - }; - }; - "ws-7.4.4" = { - name = "ws"; - packageName = "ws"; - version = "7.4.4"; - src = fetchurl { - url = "https://registry.npmjs.org/ws/-/ws-7.4.4.tgz"; - sha512 = "Qm8k8ojNQIMx7S+Zp8u/uHOx7Qazv3Yv4q68MiWWWOJhiwG5W3x7iqmRtJo8xxrciZUY4vRxUTJCKuRnF28ZZw=="; + url = "https://registry.npmjs.org/ws/-/ws-6.2.2.tgz"; + sha512 = "zmhltoSR8u1cnDsD43TX59mzoMZsLKqUweyYBAIvTngR3shc0W6aOZylZmq/7hqyVxPdi+5Ud2QInblgyE72fw=="; }; }; "ws-7.4.5" = { @@ -63421,6 +63457,15 @@ let sha512 = "YmhHDO4MzaDLB+M9ym/mDA5z0naX8j7SIlT8f8z+I0VtzsRbekxEutHSme7NPS2qE8StCYQNUnfWdXta/Yu85A=="; }; }; + "ws-7.5.0" = { + name = "ws"; + packageName = "ws"; + version = "7.5.0"; + src = fetchurl { + url = "https://registry.npmjs.org/ws/-/ws-7.5.0.tgz"; + sha512 = "6ezXvzOZupqKj4jUqbQ9tXuJNo+BR2gU8fFRk3XCP3e0G6WT414u5ELe6Y0vtp7kmSJ3F7YWObSNr1ESsgi4vw=="; + }; + }; "x-default-browser-0.3.1" = { name = "x-default-browser"; packageName = "x-default-browser"; @@ -63502,13 +63547,13 @@ let sha512 = "N1XQngeqMBoj9wM4ZFadVV2MymImeiFfYD+fJrNlcVcOHsJFFQe7n3b+aBoTPwARuq2HQxukfzVpQmAk1gN4sQ=="; }; }; - "xdl-59.0.42" = { + "xdl-59.0.44" = { name = "xdl"; packageName = "xdl"; - version = "59.0.42"; + version = "59.0.44"; src = fetchurl { - url = "https://registry.npmjs.org/xdl/-/xdl-59.0.42.tgz"; - sha512 = "/Er1hvi8AB5YbAL/JulvFkNHKd1B+9Sl8PttHZmu8kaqApkDZWPNvWhN3hBEnJIIzEODTejYII3IoAQmf7PveA=="; + url = "https://registry.npmjs.org/xdl/-/xdl-59.0.44.tgz"; + sha512 = "p9zwI5w0juiKdq5v0tIYojyqpomhMWg7C3W1tILSE48aPdkNgOlatSgAPJ9qbjBha6berKYtdOnpnfyEYOAtWQ=="; }; }; "xenvar-0.5.1" = { @@ -63781,15 +63826,6 @@ let sha512 = "z9s6k3wxE+aZHgXYxSTpGDo7BYOUfJsIRyoZiX6HTjwpwfS2wpQBQKa2fD+ShLyPkqDYo5ud7KitmLZ2Cd6r0g=="; }; }; - "xmldom-0.4.0" = { - name = "xmldom"; - packageName = "xmldom"; - version = "0.4.0"; - src = fetchurl { - url = "https://registry.npmjs.org/xmldom/-/xmldom-0.4.0.tgz"; - sha512 = "2E93k08T30Ugs+34HBSTQLVtpi6mCddaY8uO+pMNk1pqSjV5vElzn4mmh6KLxN3hki8rNcHSYzILoh3TEWORvA=="; - }; - }; "xmldom-0.5.0" = { name = "xmldom"; packageName = "xmldom"; @@ -64250,13 +64286,13 @@ let sha512 = "3lbsNRf/j+A4QuSZfDRA7HRSfWrzO0YjqTJd5kjAq37Zep1CEgaYmrH9Q3GwPiB9cHyd1Y1UwggGhJGoxipbzg=="; }; }; - "yargs-parser-15.0.1" = { + "yargs-parser-15.0.3" = { name = "yargs-parser"; packageName = "yargs-parser"; - version = "15.0.1"; + version = "15.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/yargs-parser/-/yargs-parser-15.0.1.tgz"; - sha512 = "0OAMV2mAZQrs3FkNpDQcBk1x5HXb8X4twADss4S0Iuk+2dGnLOE/fRHrsYm542GduMveyA77OF4wrNJuanRCWw=="; + url = "https://registry.npmjs.org/yargs-parser/-/yargs-parser-15.0.3.tgz"; + sha512 = "/MVEVjTXy/cGAjdtQf8dW3V9b97bPN7rNn8ETj6BmAQL7ibC7O1Q9SPJbGjgh3SlwoBNXMzj/ZGIj8mBgl12YA=="; }; }; "yargs-parser-18.1.3" = { @@ -64286,13 +64322,13 @@ let sha512 = "WOkpgNhPTlE73h4VFAFsOnomJVaovO8VqLDzy5saChRBFQFBoMYirowyW+Q9HB4HFF4Z7VZTiG3iSzJJA29yRA=="; }; }; - "yargs-parser-20.2.7" = { + "yargs-parser-20.2.9" = { name = "yargs-parser"; packageName = "yargs-parser"; - version = "20.2.7"; + version = "20.2.9"; src = fetchurl { - url = "https://registry.npmjs.org/yargs-parser/-/yargs-parser-20.2.7.tgz"; - sha512 = "FiNkvbeHzB/syOjIUxFDCnhSfzAL8R5vs40MgLFBorXACCOAEaWu0gRZl14vG8MR9AOJIZbmkjhusqBYZ3HTHw=="; + url = "https://registry.npmjs.org/yargs-parser/-/yargs-parser-20.2.9.tgz"; + sha512 = "y11nGElTIV+CT3Zv9t7VKl+Q3hTQoT9a1Qzezhhl6Rp21gJ/IVTW7Z3y9EWXhuUBC2Shnf+DX0antecpAwSP8w=="; }; }; "yargs-parser-4.2.1" = { @@ -64331,15 +64367,6 @@ let sha1 = "9ccf6a43460fe4ed40a9bb68f48d43b8a68cc077"; }; }; - "yargs-unparser-1.6.0" = { - name = "yargs-unparser"; - packageName = "yargs-unparser"; - version = "1.6.0"; - src = fetchurl { - url = "https://registry.npmjs.org/yargs-unparser/-/yargs-unparser-1.6.0.tgz"; - sha512 = "W9tKgmSn0DpSatfri0nx52Joq5hVXgeLiqR/5G0sZNDoLZFOr/xjBUDcShCOGNsBnEMNo1KAMBkTej1Hm62HTw=="; - }; - }; "yargs-unparser-2.0.0" = { name = "yargs-unparser"; packageName = "yargs-unparser"; @@ -64589,22 +64616,22 @@ in "@angular/cli" = nodeEnv.buildNodePackage { name = "_at_angular_slash_cli"; packageName = "@angular/cli"; - version = "12.0.2"; + version = "12.0.5"; src = fetchurl { - url = "https://registry.npmjs.org/@angular/cli/-/cli-12.0.2.tgz"; - sha512 = "hXxnOxPl6+v/O+OnkJxPPupCeQJNmI08EdtnER5z/UCSpmlJibbTAqLF9rFaOi/7dPLS0RCNWmCRA6grgTlP9g=="; + url = "https://registry.npmjs.org/@angular/cli/-/cli-12.0.5.tgz"; + sha512 = "MdgJ9DY3bWYsMFr9Xa+60gtVaYErhAE8ULGnUyI8zLMhWqrV1ZpJJ1WfP8pMQYx4HaKJIgx7wd8az7ZXAcF8hg=="; }; dependencies = [ - sources."@angular-devkit/architect-0.1200.2" - sources."@angular-devkit/core-12.0.2" - sources."@angular-devkit/schematics-12.0.2" - sources."@npmcli/git-2.0.9" + sources."@angular-devkit/architect-0.1200.5" + sources."@angular-devkit/core-12.0.5" + sources."@angular-devkit/schematics-12.0.5" + sources."@npmcli/git-2.1.0" sources."@npmcli/installed-package-contents-1.0.7" sources."@npmcli/move-file-1.1.2" sources."@npmcli/node-gyp-1.0.2" sources."@npmcli/promise-spawn-1.3.2" sources."@npmcli/run-script-1.8.5" - sources."@schematics/angular-12.0.2" + sources."@schematics/angular-12.0.5" sources."@tootallnate/once-1.1.2" sources."@yarnpkg/lockfile-1.1.0" sources."abbrev-1.1.1" @@ -64744,8 +64771,8 @@ in sources."lru-cache-6.0.0" sources."magic-string-0.25.7" sources."make-fetch-happen-8.0.14" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."minimatch-3.0.4" sources."minipass-3.1.3" @@ -64809,7 +64836,7 @@ in sources."signal-exit-3.0.3" sources."smart-buffer-4.1.0" sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."source-map-0.7.3" sources."sourcemap-codec-1.4.8" sources."sshpk-1.16.1" @@ -64963,7 +64990,7 @@ in ]; }) sources."concat-map-0.0.1" - (sources."convert-source-map-1.7.0" // { + (sources."convert-source-map-1.8.0" // { dependencies = [ sources."safe-buffer-5.1.2" ]; @@ -65083,8 +65110,8 @@ in sources."map-obj-4.2.1" sources."marky-1.2.2" sources."matcher-2.1.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-response-2.1.0" sources."minimatch-3.0.4" sources."minimatch-all-1.1.0" @@ -65173,7 +65200,7 @@ in ]; }) sources."to-utf8-0.0.1" - sources."uglify-js-3.13.8" + sources."uglify-js-3.13.9" sources."unc-path-regex-0.1.2" sources."unique-stream-2.3.1" sources."universalify-0.1.2" @@ -65299,8 +65326,8 @@ in sources."lodash.sortby-4.7.0" sources."lowdb-1.0.0" sources."lunr-2.3.3" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."ms-2.1.2" sources."mute-stream-0.0.7" @@ -65362,7 +65389,7 @@ in sources."whatwg-mimetype-2.3.0" sources."whatwg-url-7.1.0" sources."word-wrap-1.2.3" - sources."ws-6.2.1" + sources."ws-6.2.2" sources."xml-name-validator-3.0.0" sources."xmlchars-2.2.0" sources."zxcvbn-4.4.2" @@ -65394,9 +65421,9 @@ in ]; }) sources."@angular-devkit/schematics-cli-0.1102.6" - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."ansi-styles-3.2.1" sources."chalk-2.4.2" @@ -65415,12 +65442,12 @@ in ]; }) sources."@schematics/schematics-0.1102.6" - sources."@types/eslint-7.2.12" + sources."@types/eslint-7.2.13" sources."@types/eslint-scope-3.7.0" sources."@types/estree-0.0.46" sources."@types/json-schema-7.0.7" sources."@types/json5-0.0.29" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/parse-json-4.0.0" sources."@webassemblyjs/ast-1.11.0" sources."@webassemblyjs/floating-point-hex-parser-1.11.0" @@ -65439,7 +65466,7 @@ in sources."@webassemblyjs/wast-printer-1.11.0" sources."@xtuc/ieee754-1.2.0" sources."@xtuc/long-4.2.2" - sources."acorn-8.3.0" + sources."acorn-8.4.0" sources."ajv-6.12.6" sources."ajv-keywords-3.5.2" sources."ansi-colors-4.1.1" @@ -65458,7 +65485,7 @@ in sources."buffer-5.7.1" sources."buffer-from-1.1.1" sources."callsites-3.1.0" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."chalk-3.0.0" sources."chardet-0.7.0" sources."chokidar-3.5.1" @@ -65478,7 +65505,7 @@ in sources."cross-spawn-7.0.3" sources."deepmerge-4.2.2" sources."defaults-1.0.3" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" sources."emoji-regex-8.0.0" sources."end-of-stream-1.4.4" (sources."enhanced-resolve-5.8.2" // { @@ -65568,19 +65595,19 @@ in ]; }) sources."lru-cache-6.0.0" - sources."macos-release-2.4.1" + sources."macos-release-2.5.0" sources."magic-string-0.25.7" sources."memfs-3.2.2" sources."merge-stream-2.0.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."minimatch-3.0.4" sources."minimist-1.2.5" sources."mute-stream-0.0.8" sources."neo-async-2.6.2" sources."node-emoji-1.10.0" - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" sources."normalize-path-3.0.0" sources."npm-run-path-4.0.1" sources."object-assign-4.1.1" @@ -65720,58 +65747,58 @@ in sources."@apollographql/apollo-tools-0.5.1" sources."@apollographql/graphql-playground-html-1.6.27" sources."@apollographql/graphql-upload-8-fork-8.1.3" - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" - sources."@babel/core-7.14.3" - sources."@babel/generator-7.14.3" - sources."@babel/helper-annotate-as-pure-7.12.13" - sources."@babel/helper-builder-binary-assignment-operator-visitor-7.12.13" - sources."@babel/helper-compilation-targets-7.14.4" - sources."@babel/helper-create-class-features-plugin-7.14.4" - sources."@babel/helper-create-regexp-features-plugin-7.14.3" + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" + sources."@babel/core-7.14.6" + sources."@babel/generator-7.14.5" + sources."@babel/helper-annotate-as-pure-7.14.5" + sources."@babel/helper-builder-binary-assignment-operator-visitor-7.14.5" + sources."@babel/helper-compilation-targets-7.14.5" + sources."@babel/helper-create-class-features-plugin-7.14.6" + sources."@babel/helper-create-regexp-features-plugin-7.14.5" sources."@babel/helper-define-polyfill-provider-0.2.3" - sources."@babel/helper-explode-assignable-expression-7.13.0" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-hoist-variables-7.13.16" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-plugin-utils-7.13.0" - sources."@babel/helper-remap-async-to-generator-7.13.0" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-skip-transparent-expression-wrappers-7.12.1" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helper-wrap-function-7.13.0" - sources."@babel/helpers-7.14.0" - sources."@babel/highlight-7.14.0" - sources."@babel/parser-7.14.4" - sources."@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining-7.13.12" - sources."@babel/plugin-proposal-async-generator-functions-7.14.2" - sources."@babel/plugin-proposal-class-properties-7.13.0" - sources."@babel/plugin-proposal-class-static-block-7.14.3" - sources."@babel/plugin-proposal-dynamic-import-7.14.2" - sources."@babel/plugin-proposal-export-namespace-from-7.14.2" - sources."@babel/plugin-proposal-json-strings-7.14.2" - sources."@babel/plugin-proposal-logical-assignment-operators-7.14.2" - sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.2" - sources."@babel/plugin-proposal-numeric-separator-7.14.2" - sources."@babel/plugin-proposal-object-rest-spread-7.14.4" - sources."@babel/plugin-proposal-optional-catch-binding-7.14.2" - sources."@babel/plugin-proposal-optional-chaining-7.14.2" - sources."@babel/plugin-proposal-private-methods-7.13.0" - sources."@babel/plugin-proposal-private-property-in-object-7.14.0" - sources."@babel/plugin-proposal-unicode-property-regex-7.12.13" + sources."@babel/helper-explode-assignable-expression-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-plugin-utils-7.14.5" + sources."@babel/helper-remap-async-to-generator-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-skip-transparent-expression-wrappers-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helper-wrap-function-7.14.5" + sources."@babel/helpers-7.14.6" + sources."@babel/highlight-7.14.5" + sources."@babel/parser-7.14.7" + sources."@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining-7.14.5" + sources."@babel/plugin-proposal-async-generator-functions-7.14.7" + sources."@babel/plugin-proposal-class-properties-7.14.5" + sources."@babel/plugin-proposal-class-static-block-7.14.5" + sources."@babel/plugin-proposal-dynamic-import-7.14.5" + sources."@babel/plugin-proposal-export-namespace-from-7.14.5" + sources."@babel/plugin-proposal-json-strings-7.14.5" + sources."@babel/plugin-proposal-logical-assignment-operators-7.14.5" + sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.5" + sources."@babel/plugin-proposal-numeric-separator-7.14.5" + sources."@babel/plugin-proposal-object-rest-spread-7.14.7" + sources."@babel/plugin-proposal-optional-catch-binding-7.14.5" + sources."@babel/plugin-proposal-optional-chaining-7.14.5" + sources."@babel/plugin-proposal-private-methods-7.14.5" + sources."@babel/plugin-proposal-private-property-in-object-7.14.5" + sources."@babel/plugin-proposal-unicode-property-regex-7.14.5" sources."@babel/plugin-syntax-async-generators-7.8.4" sources."@babel/plugin-syntax-class-properties-7.12.13" - sources."@babel/plugin-syntax-class-static-block-7.12.13" + sources."@babel/plugin-syntax-class-static-block-7.14.5" sources."@babel/plugin-syntax-dynamic-import-7.8.3" sources."@babel/plugin-syntax-export-namespace-from-7.8.3" - sources."@babel/plugin-syntax-flow-7.12.13" + sources."@babel/plugin-syntax-flow-7.14.5" sources."@babel/plugin-syntax-json-strings-7.8.3" sources."@babel/plugin-syntax-logical-assignment-operators-7.10.4" sources."@babel/plugin-syntax-nullish-coalescing-operator-7.8.3" @@ -65779,58 +65806,58 @@ in sources."@babel/plugin-syntax-object-rest-spread-7.8.3" sources."@babel/plugin-syntax-optional-catch-binding-7.8.3" sources."@babel/plugin-syntax-optional-chaining-7.8.3" - sources."@babel/plugin-syntax-private-property-in-object-7.14.0" - sources."@babel/plugin-syntax-top-level-await-7.12.13" - sources."@babel/plugin-syntax-typescript-7.12.13" - sources."@babel/plugin-transform-arrow-functions-7.13.0" - sources."@babel/plugin-transform-async-to-generator-7.13.0" - sources."@babel/plugin-transform-block-scoped-functions-7.12.13" - sources."@babel/plugin-transform-block-scoping-7.14.4" - sources."@babel/plugin-transform-classes-7.14.4" - sources."@babel/plugin-transform-computed-properties-7.13.0" - sources."@babel/plugin-transform-destructuring-7.14.4" - sources."@babel/plugin-transform-dotall-regex-7.12.13" - sources."@babel/plugin-transform-duplicate-keys-7.12.13" - sources."@babel/plugin-transform-exponentiation-operator-7.12.13" - sources."@babel/plugin-transform-flow-strip-types-7.13.0" - sources."@babel/plugin-transform-for-of-7.13.0" - sources."@babel/plugin-transform-function-name-7.12.13" - sources."@babel/plugin-transform-literals-7.12.13" - sources."@babel/plugin-transform-member-expression-literals-7.12.13" - sources."@babel/plugin-transform-modules-amd-7.14.2" - sources."@babel/plugin-transform-modules-commonjs-7.14.0" - sources."@babel/plugin-transform-modules-systemjs-7.13.8" - sources."@babel/plugin-transform-modules-umd-7.14.0" - sources."@babel/plugin-transform-named-capturing-groups-regex-7.12.13" - sources."@babel/plugin-transform-new-target-7.12.13" - sources."@babel/plugin-transform-object-super-7.12.13" - sources."@babel/plugin-transform-parameters-7.14.2" - sources."@babel/plugin-transform-property-literals-7.12.13" - sources."@babel/plugin-transform-regenerator-7.13.15" - sources."@babel/plugin-transform-reserved-words-7.12.13" - sources."@babel/plugin-transform-shorthand-properties-7.12.13" - sources."@babel/plugin-transform-spread-7.13.0" - sources."@babel/plugin-transform-sticky-regex-7.12.13" - sources."@babel/plugin-transform-template-literals-7.13.0" - sources."@babel/plugin-transform-typeof-symbol-7.12.13" - sources."@babel/plugin-transform-typescript-7.14.4" - sources."@babel/plugin-transform-unicode-escapes-7.12.13" - sources."@babel/plugin-transform-unicode-regex-7.12.13" - sources."@babel/preset-env-7.14.4" - sources."@babel/preset-flow-7.13.13" + sources."@babel/plugin-syntax-private-property-in-object-7.14.5" + sources."@babel/plugin-syntax-top-level-await-7.14.5" + sources."@babel/plugin-syntax-typescript-7.14.5" + sources."@babel/plugin-transform-arrow-functions-7.14.5" + sources."@babel/plugin-transform-async-to-generator-7.14.5" + sources."@babel/plugin-transform-block-scoped-functions-7.14.5" + sources."@babel/plugin-transform-block-scoping-7.14.5" + sources."@babel/plugin-transform-classes-7.14.5" + sources."@babel/plugin-transform-computed-properties-7.14.5" + sources."@babel/plugin-transform-destructuring-7.14.7" + sources."@babel/plugin-transform-dotall-regex-7.14.5" + sources."@babel/plugin-transform-duplicate-keys-7.14.5" + sources."@babel/plugin-transform-exponentiation-operator-7.14.5" + sources."@babel/plugin-transform-flow-strip-types-7.14.5" + sources."@babel/plugin-transform-for-of-7.14.5" + sources."@babel/plugin-transform-function-name-7.14.5" + sources."@babel/plugin-transform-literals-7.14.5" + sources."@babel/plugin-transform-member-expression-literals-7.14.5" + sources."@babel/plugin-transform-modules-amd-7.14.5" + sources."@babel/plugin-transform-modules-commonjs-7.14.5" + sources."@babel/plugin-transform-modules-systemjs-7.14.5" + sources."@babel/plugin-transform-modules-umd-7.14.5" + sources."@babel/plugin-transform-named-capturing-groups-regex-7.14.7" + sources."@babel/plugin-transform-new-target-7.14.5" + sources."@babel/plugin-transform-object-super-7.14.5" + sources."@babel/plugin-transform-parameters-7.14.5" + sources."@babel/plugin-transform-property-literals-7.14.5" + sources."@babel/plugin-transform-regenerator-7.14.5" + sources."@babel/plugin-transform-reserved-words-7.14.5" + sources."@babel/plugin-transform-shorthand-properties-7.14.5" + sources."@babel/plugin-transform-spread-7.14.6" + sources."@babel/plugin-transform-sticky-regex-7.14.5" + sources."@babel/plugin-transform-template-literals-7.14.5" + sources."@babel/plugin-transform-typeof-symbol-7.14.5" + sources."@babel/plugin-transform-typescript-7.14.6" + sources."@babel/plugin-transform-unicode-escapes-7.14.5" + sources."@babel/plugin-transform-unicode-regex-7.14.5" + sources."@babel/preset-env-7.14.7" + sources."@babel/preset-flow-7.14.5" sources."@babel/preset-modules-0.1.4" - sources."@babel/preset-typescript-7.13.0" - (sources."@babel/register-7.13.16" // { + sources."@babel/preset-typescript-7.14.5" + (sources."@babel/register-7.14.5" // { dependencies = [ sources."make-dir-2.1.0" sources."pify-4.0.1" sources."semver-5.7.1" ]; }) - sources."@babel/runtime-7.14.0" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/runtime-7.14.6" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" sources."@hapi/address-2.1.4" sources."@hapi/bourne-1.3.2" sources."@hapi/hoek-8.5.1" @@ -65838,13 +65865,13 @@ in sources."@hapi/topo-3.1.6" sources."@josephg/resolvable-1.0.1" sources."@mrmlnc/readdir-enhanced-2.2.1" - (sources."@nodelib/fs.scandir-2.1.4" // { + (sources."@nodelib/fs.scandir-2.1.5" // { dependencies = [ - sources."@nodelib/fs.stat-2.0.4" + sources."@nodelib/fs.stat-2.0.5" ]; }) sources."@nodelib/fs.stat-1.1.3" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.walk-1.2.7" sources."@protobufjs/aspromise-1.1.2" sources."@protobufjs/base64-1.1.2" sources."@protobufjs/codegen-2.0.4" @@ -65863,8 +65890,8 @@ in sources."@types/cookies-0.7.6" sources."@types/cors-2.8.10" sources."@types/ejs-2.7.0" - sources."@types/express-4.17.11" - sources."@types/express-serve-static-core-4.17.19" + sources."@types/express-4.17.12" + sources."@types/express-serve-static-core-4.17.21" sources."@types/fs-capacitor-2.0.0" sources."@types/glob-7.1.3" sources."@types/http-assert-1.5.1" @@ -65883,13 +65910,13 @@ in sources."@types/long-4.0.1" sources."@types/mime-1.3.2" sources."@types/minimatch-3.0.4" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/normalize-package-data-2.4.0" sources."@types/qs-6.9.6" sources."@types/range-parser-1.2.3" sources."@types/serve-static-1.13.9" sources."@types/through-0.0.30" - sources."@types/ws-7.4.4" + sources."@types/ws-7.4.5" sources."@vue/cli-shared-utils-4.5.13" (sources."@vue/cli-ui-4.5.13" // { dependencies = [ @@ -65898,13 +65925,13 @@ in }) sources."@vue/cli-ui-addon-webpack-4.5.13" sources."@vue/cli-ui-addon-widgets-4.5.13" - (sources."@vue/compiler-core-3.0.11" // { + (sources."@vue/compiler-core-3.1.2" // { dependencies = [ sources."source-map-0.6.1" ]; }) - sources."@vue/compiler-dom-3.0.11" - sources."@vue/shared-3.0.11" + sources."@vue/compiler-dom-3.1.2" + sources."@vue/shared-3.1.2" sources."@wry/equality-0.1.11" sources."accepts-1.3.7" sources."aggregate-error-3.1.0" @@ -65932,7 +65959,7 @@ in sources."lru-cache-6.0.0" ]; }) - (sources."apollo-server-core-2.25.0" // { + (sources."apollo-server-core-2.25.2" // { dependencies = [ sources."lru-cache-6.0.0" sources."uuid-8.3.2" @@ -65940,7 +65967,7 @@ in }) sources."apollo-server-env-3.1.0" sources."apollo-server-errors-2.5.0" - sources."apollo-server-express-2.25.0" + sources."apollo-server-express-2.25.2" sources."apollo-server-plugin-base-0.13.0" sources."apollo-server-types-0.9.0" sources."apollo-tracing-0.15.0" @@ -65964,7 +65991,6 @@ in sources."assign-symbols-1.0.0" sources."ast-types-0.13.3" sources."async-2.6.3" - sources."async-limiter-1.0.1" sources."async-retry-1.3.1" sources."asynckit-0.4.0" sources."atob-2.1.2" @@ -65973,7 +65999,7 @@ in sources."babel-core-7.0.0-bridge.0" sources."babel-plugin-dynamic-import-node-2.3.3" sources."babel-plugin-polyfill-corejs2-0.2.2" - sources."babel-plugin-polyfill-corejs3-0.2.2" + sources."babel-plugin-polyfill-corejs3-0.2.3" sources."babel-plugin-polyfill-regenerator-0.2.2" sources."backo2-1.0.2" sources."balanced-match-1.0.2" @@ -66027,7 +66053,7 @@ in sources."call-bind-1.0.2" sources."call-me-maybe-1.0.1" sources."camelcase-5.3.1" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."caseless-0.12.0" sources."caw-2.0.1" sources."chalk-2.4.2" @@ -66070,14 +66096,14 @@ in sources."commondir-1.0.1" sources."component-emitter-1.3.0" sources."concat-map-0.0.1" - sources."config-chain-1.1.12" + sources."config-chain-1.1.13" (sources."content-disposition-0.5.3" // { dependencies = [ sources."safe-buffer-5.1.2" ]; }) sources."content-type-1.0.4" - (sources."convert-source-map-1.7.0" // { + (sources."convert-source-map-1.8.0" // { dependencies = [ sources."safe-buffer-5.1.2" ]; @@ -66085,12 +66111,12 @@ in sources."cookie-0.4.0" sources."cookie-signature-1.0.6" sources."copy-descriptor-0.1.1" - (sources."core-js-compat-3.13.1" // { + (sources."core-js-compat-3.15.1" // { dependencies = [ sources."semver-7.0.0" ]; }) - sources."core-js-pure-3.13.1" + sources."core-js-pure-3.15.1" sources."core-util-is-1.0.2" sources."cors-2.8.5" (sources."cross-spawn-6.0.5" // { @@ -66157,7 +66183,7 @@ in sources."ecc-jsbn-0.1.2" sources."ee-first-1.1.1" sources."ejs-2.7.4" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" sources."emoji-regex-7.0.3" sources."encodeurl-1.0.2" sources."end-of-stream-1.4.4" @@ -66240,7 +66266,7 @@ in }) sources."find-up-3.0.0" sources."fkill-6.2.0" - sources."flow-parser-0.152.0" + sources."flow-parser-0.153.0" sources."for-each-0.3.3" sources."for-in-1.0.2" sources."forever-agent-0.6.1" @@ -66295,7 +66321,7 @@ in sources."graphql-subscriptions-1.2.1" (sources."graphql-tag-2.12.4" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."graphql-tools-4.0.8" @@ -66400,7 +66426,7 @@ in sources."ast-types-0.14.2" sources."recast-0.20.4" sources."source-map-0.6.1" - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."jsesc-2.5.2" @@ -66449,8 +66475,8 @@ in ]; }) sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -66492,7 +66518,7 @@ in sources."which-2.0.2" ]; }) - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" (sources."normalize-package-data-2.5.0" // { dependencies = [ sources."semver-5.7.1" @@ -66774,11 +66800,7 @@ in sources."strip-eof-1.0.0" sources."strip-final-newline-2.0.0" sources."strip-outer-1.0.1" - (sources."subscriptions-transport-ws-0.9.18" // { - dependencies = [ - sources."ws-5.2.2" - ]; - }) + sources."subscriptions-transport-ws-0.9.19" sources."supports-color-5.5.0" sources."symbol-observable-1.2.0" sources."tar-stream-1.6.2" @@ -66837,7 +66859,7 @@ in sources."tweetnacl-0.14.5" sources."type-fest-0.6.0" sources."type-is-1.6.18" - sources."typescript-4.1.5" + sources."typescript-4.1.6" sources."unbox-primitive-1.0.1" sources."unbzip2-stream-1.4.3" sources."unicode-canonical-property-names-ecmascript-1.0.4" @@ -66870,17 +66892,17 @@ in sources."validate-npm-package-name-3.0.0" sources."vary-1.1.2" sources."verror-1.10.0" - sources."vue-2.6.12" + sources."vue-2.6.14" (sources."vue-codemod-0.0.5" // { dependencies = [ - sources."@nodelib/fs.stat-2.0.4" + sources."@nodelib/fs.stat-2.0.5" sources."array-union-2.1.0" sources."braces-3.0.2" sources."dir-glob-3.0.1" sources."fast-glob-3.2.5" sources."fill-range-7.0.1" sources."glob-parent-5.1.2" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."ignore-5.1.8" sources."is-number-7.0.0" sources."lru-cache-6.0.0" @@ -66904,7 +66926,7 @@ in }) sources."wrappy-1.0.2" sources."write-file-atomic-2.4.3" - sources."ws-6.2.1" + sources."ws-7.5.0" sources."xml2js-0.4.23" sources."xmlbuilder-11.0.1" sources."xss-1.0.9" @@ -66917,7 +66939,7 @@ in ]; }) sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" sources."yauzl-2.10.0" sources."zen-observable-0.8.15" sources."zen-observable-ts-0.8.21" @@ -67056,13 +67078,13 @@ in sha512 = "Q1OfB3hpa4TtM6x5a2gJmZncpQYx0hFt4ohdgv4Ms67kcAVwL29QQ2NDbNqfKr15IzlNAhLGueCzxG6dMjdnbQ=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/generator-7.14.3" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/highlight-7.14.0" - sources."@babel/parser-7.14.4" - sources."@babel/template-7.12.13" - sources."@babel/types-7.14.4" + sources."@babel/code-frame-7.14.5" + sources."@babel/generator-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/highlight-7.14.5" + sources."@babel/parser-7.14.7" + sources."@babel/template-7.14.5" + sources."@babel/types-7.14.5" sources."@webassemblyjs/ast-1.11.0" sources."@webassemblyjs/floating-point-hex-parser-1.11.0" sources."@webassemblyjs/helper-api-error-1.11.0" @@ -67130,42 +67152,43 @@ in alloy = nodeEnv.buildNodePackage { name = "alloy"; packageName = "alloy"; - version = "1.16.0"; + version = "1.16.2"; src = fetchurl { - url = "https://registry.npmjs.org/alloy/-/alloy-1.16.0.tgz"; - sha512 = "TR3y3sHEmRSAt7ikc9rWtWrpJ/2MpvgM5knMhbDJWxvqcvyTPagASAA5gktPJRhxnS2+RScVFEd0I6G/XGTuoQ=="; + url = "https://registry.npmjs.org/alloy/-/alloy-1.16.2.tgz"; + sha512 = "9/MIehoAx0KtmGIlH408LVU99ms+JycCCLY+DI1CvI8HwwRxS1d5clbKj/7JmCPm5cRYnD7798x4JDNMVNaSIA=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" - (sources."@babel/core-7.14.3" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" + (sources."@babel/core-7.14.6" // { dependencies = [ sources."source-map-0.5.7" ]; }) - (sources."@babel/generator-7.14.3" // { + (sources."@babel/generator-7.14.5" // { dependencies = [ sources."source-map-0.5.7" ]; }) - sources."@babel/helper-compilation-targets-7.14.4" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helpers-7.14.0" - sources."@babel/highlight-7.14.0" - sources."@babel/parser-7.14.4" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/helper-compilation-targets-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helpers-7.14.6" + sources."@babel/highlight-7.14.5" + sources."@babel/parser-7.14.7" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" sources."JSV-4.0.2" sources."ansi-styles-3.2.1" sources."array-unique-0.3.2" @@ -67173,18 +67196,18 @@ in sources."balanced-match-1.0.2" sources."brace-expansion-1.1.11" sources."browserslist-4.16.6" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."chalk-2.4.2" sources."color-convert-1.9.3" sources."color-name-1.1.3" sources."colorette-1.2.2" sources."colors-1.4.0" - sources."commander-2.20.3" + sources."commander-7.2.0" sources."concat-map-0.0.1" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."debug-4.3.2" sources."ejs-3.1.6" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" sources."ensure-posix-path-1.1.1" sources."escalade-3.1.1" sources."escape-string-regexp-1.0.5" @@ -67230,7 +67253,7 @@ in sources."minimist-1.2.5" sources."moment-2.29.1" sources."ms-2.1.2" - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" sources."node.extend-2.0.2" (sources."nomnom-1.8.1" // { dependencies = [ @@ -67245,7 +67268,7 @@ in sources."safe-buffer-5.1.2" sources."sax-0.5.8" sources."semver-6.3.0" - sources."source-map-0.6.1" + sources."source-map-0.7.3" sources."strip-ansi-0.1.1" sources."supports-color-5.5.0" sources."to-fast-properties-2.0.0" @@ -67255,7 +67278,7 @@ in sources."which-1.3.1" sources."xml2js-0.2.8" sources."xml2tss-0.0.5" - sources."xmldom-0.4.0" + sources."xmldom-0.6.0" ]; buildInputs = globalBuildInputs; meta = { @@ -67278,7 +67301,7 @@ in dependencies = [ sources."@types/glob-7.1.3" sources."@types/minimatch-3.0.4" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."balanced-match-1.0.2" sources."brace-expansion-1.1.11" sources."chromium-pickle-js-0.2.0" @@ -67313,7 +67336,7 @@ in }; dependencies = [ sources."@tootallnate/once-1.1.2" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/yauzl-2.9.1" sources."agent-base-6.0.2" sources."ansi-escapes-4.3.2" @@ -67321,10 +67344,10 @@ in sources."ansi-styles-4.3.0" (sources."ast-types-0.13.4" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) - (sources."aws-sdk-2.918.0" // { + (sources."aws-sdk-2.932.0" // { dependencies = [ sources."uuid-3.3.2" ]; @@ -67367,7 +67390,7 @@ in sources."dom-serializer-1.2.0" sources."domelementtype-2.2.0" sources."domhandler-4.2.0" - sources."domutils-2.6.0" + sources."domutils-2.7.0" sources."emoji-regex-8.0.0" sources."end-of-stream-1.4.4" sources."entities-2.1.0" @@ -67461,7 +67484,7 @@ in sources."signal-exit-3.0.3" sources."smart-buffer-4.1.0" sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."source-map-0.6.1" sources."statuses-1.5.0" sources."string-width-4.2.2" @@ -67493,7 +67516,7 @@ in sources."uuid-8.3.2" sources."word-wrap-1.2.3" sources."wrappy-1.0.2" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xml2js-0.4.19" sources."xmlbuilder-9.0.7" sources."xregexp-2.0.0" @@ -67513,10 +67536,10 @@ in balanceofsatoshis = nodeEnv.buildNodePackage { name = "balanceofsatoshis"; packageName = "balanceofsatoshis"; - version = "8.0.14"; + version = "10.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/balanceofsatoshis/-/balanceofsatoshis-8.0.14.tgz"; - sha512 = "z9/oACcuCHyWSg2c5J1G/HNcTAknUc4YS2SIqsbjw27YmAL2x6T9Uo1OSSemWnOqGtlHfS6xf7X3DJNsfIYPfQ=="; + url = "https://registry.npmjs.org/balanceofsatoshis/-/balanceofsatoshis-10.1.0.tgz"; + sha512 = "ZKHOfZkyXhevLUbQMijz6PEGBZuBdeUS6oqdqrmeYlOB2xZPC/KxCPmKTD7igbq7eD2E/XixtzpHub8bQnxRIg=="; }; dependencies = [ sources."@alexbosworth/html2unicode-1.1.5" @@ -67527,12 +67550,12 @@ in }) sources."@alexbosworth/saxophone-0.6.2" sources."@cto.af/textdecoder-0.0.0" - (sources."@grpc/grpc-js-1.2.12" // { + (sources."@grpc/grpc-js-1.3.2" // { dependencies = [ - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" ]; }) - sources."@grpc/proto-loader-0.6.1" + sources."@grpc/proto-loader-0.6.2" sources."@handsontable/formulajs-2.0.2" sources."@mitmaro/errors-1.0.0" sources."@mitmaro/http-authorization-header-1.0.0" @@ -67551,8 +67574,8 @@ in sources."@types/body-parser-1.19.0" sources."@types/caseless-0.12.2" sources."@types/connect-3.4.34" - sources."@types/express-4.17.11" - sources."@types/express-serve-static-core-4.17.20" + sources."@types/express-4.17.12" + sources."@types/express-serve-static-core-4.17.21" sources."@types/long-4.0.1" sources."@types/mime-1.3.2" sources."@types/node-10.12.18" @@ -67565,7 +67588,7 @@ in }) sources."@types/serve-static-1.13.9" sources."@types/tough-cookie-4.0.0" - sources."@types/ws-7.4.1" + sources."@types/ws-7.4.4" sources."abort-controller-3.0.0" sources."accepts-1.3.7" (sources."agent-base-6.0.2" // { @@ -67601,7 +67624,7 @@ in sources."assert-plus-1.0.0" sources."astral-regex-2.0.0" sources."async-3.2.0" - sources."asyncjs-util-1.2.5" + sources."asyncjs-util-1.2.6" sources."asynckit-0.4.0" sources."aws-sign2-0.7.0" sources."aws4-1.9.1" @@ -67624,6 +67647,7 @@ in sources."bip68-1.0.4" sources."bitcoin-ops-1.4.1" sources."bitcoinjs-lib-5.2.0" + sources."bl-4.1.0" sources."bluebird-3.7.2" sources."bn.js-4.12.0" (sources."body-parser-1.19.0" // { @@ -67631,18 +67655,18 @@ in sources."qs-6.7.0" ]; }) - (sources."bolt01-1.2.1" // { + (sources."bolt01-1.2.2" // { dependencies = [ sources."bn.js-5.2.0" ]; }) - sources."bolt03-1.2.9" - (sources."bolt07-1.7.2" // { + sources."bolt03-1.2.10" + (sources."bolt07-1.7.3" // { dependencies = [ sources."bn.js-5.2.0" ]; }) - sources."bolt09-0.1.4" + sources."bolt09-0.1.5" (sources."boxen-5.0.1" // { dependencies = [ sources."ansi-regex-5.0.0" @@ -67658,6 +67682,7 @@ in sources."brorand-1.1.0" sources."bs58-4.0.1" sources."bs58check-2.1.2" + sources."buffer-5.7.1" sources."buffer-alloc-1.2.0" sources."buffer-alloc-unsafe-1.1.0" sources."buffer-equal-constant-time-1.0.1" @@ -67686,6 +67711,7 @@ in sources."cipher-base-1.0.4" sources."cli-boxes-2.2.1" sources."cli-cursor-1.0.2" + sources."cli-spinners-2.6.0" sources."cli-table3-0.5.1" sources."cli-width-2.2.1" (sources."cliui-7.0.4" // { @@ -67696,6 +67722,7 @@ in sources."strip-ansi-6.0.0" ]; }) + sources."clone-1.0.4" sources."clone-response-1.0.2" sources."code-point-at-1.1.0" sources."color-convert-2.0.1" @@ -67726,12 +67753,13 @@ in sources."create-hmac-1.1.7" sources."crypto-js-4.0.0" sources."crypto-random-string-2.0.0" - sources."csv-parse-4.15.4" + sources."csv-parse-4.16.0" sources."cycle-1.0.3" sources."dashdash-1.14.1" sources."debug-2.6.9" sources."decompress-response-3.3.0" sources."deep-extend-0.6.0" + sources."defaults-1.0.3" sources."defer-to-connect-1.1.3" sources."define-property-1.0.0" sources."delayed-stream-1.0.0" @@ -67777,24 +67805,22 @@ in sources."fresh-0.5.2" sources."gauge-1.2.7" sources."gaxios-4.3.0" - sources."gcp-metadata-4.2.1" + sources."gcp-metadata-4.3.0" sources."get-caller-file-2.0.5" sources."get-stream-4.1.0" sources."getpass-0.1.7" sources."global-dirs-3.0.0" - (sources."goldengate-10.0.4" // { + (sources."goldengate-10.1.0" // { dependencies = [ - sources."bech32-2.0.0" sources."bn.js-5.2.0" - sources."invoices-1.1.7" - sources."ln-service-51.7.0" + sources."ln-service-51.8.2" ]; }) sources."google-auth-library-6.1.6" - sources."google-p12-pem-3.0.3" + sources."google-p12-pem-3.1.0" sources."got-9.6.0" sources."graceful-fs-4.2.6" - sources."gtoken-5.2.1" + sources."gtoken-5.3.0" sources."har-schema-2.0.0" sources."har-validator-5.1.3" (sources."has-ansi-2.0.0" // { @@ -67823,11 +67849,12 @@ in ]; }) sources."iconv-lite-0.4.24" + sources."ieee754-1.2.1" sources."import-lazy-4.0.0" sources."imurmurhash-0.1.4" sources."inherits-2.0.4" sources."ini-2.0.0" - (sources."inquirer-8.0.0" // { + (sources."inquirer-8.1.1" // { dependencies = [ sources."ansi-escapes-4.3.2" sources."ansi-regex-5.0.0" @@ -67847,7 +67874,7 @@ in sources."tmp-0.0.33" ]; }) - (sources."invoices-1.2.0" // { + (sources."invoices-1.2.1" // { dependencies = [ sources."bech32-2.0.0" sources."bn.js-5.2.0" @@ -67862,6 +67889,7 @@ in sources."is-descriptor-1.0.2" sources."is-fullwidth-code-point-2.0.0" sources."is-installed-globally-0.4.0" + sources."is-interactive-1.0.0" sources."is-npm-5.0.0" (sources."is-number-3.0.0" // { dependencies = [ @@ -67872,6 +67900,7 @@ in sources."is-path-inside-3.0.3" sources."is-stream-2.0.0" sources."is-typedarray-1.0.0" + sources."is-unicode-supported-0.1.0" sources."is-yarn-global-0.3.0" sources."isarray-1.0.0" sources."isnumber-1.0.0" @@ -67891,53 +67920,33 @@ in sources."keyv-3.1.0" sources."kind-of-6.0.3" sources."latest-version-5.1.0" - (sources."lightning-3.3.4" // { + (sources."lightning-3.3.9" // { dependencies = [ - sources."@grpc/proto-loader-0.6.0" - sources."@types/node-14.14.37" - sources."bech32-2.0.0" + sources."@types/node-15.6.1" sources."bn.js-5.2.0" - sources."invoices-1.1.7" ]; }) - (sources."ln-accounting-4.2.7" // { + (sources."ln-accounting-4.3.0" // { dependencies = [ - sources."@grpc/grpc-js-1.2.11" - sources."@grpc/proto-loader-0.5.6" - sources."@types/node-14.14.35" - sources."@types/ws-7.4.0" - sources."asyncjs-util-1.2.4" - sources."bech32-2.0.0" sources."bn.js-5.2.0" - sources."bolt07-1.7.1" - sources."bolt09-0.1.3" - sources."cbor-7.0.4" - sources."goldengate-10.0.3" - sources."invoices-1.1.6" - (sources."lightning-3.3.1" // { - dependencies = [ - sources."asyncjs-util-1.2.3" - ]; - }) - sources."ln-service-51.5.0" - sources."psbt-1.1.8" + sources."goldengate-10.0.6" + sources."ln-service-51.8.2" ]; }) - (sources."ln-service-51.8.1" // { + (sources."ln-service-51.8.4" // { dependencies = [ - sources."@grpc/grpc-js-1.3.1" - sources."@grpc/proto-loader-0.6.2" - sources."@types/node-15.0.3" - sources."@types/ws-7.4.4" + sources."@types/node-15.12.4" + sources."@types/ws-7.4.5" sources."bn.js-5.2.0" - sources."lightning-3.3.7" - sources."ws-7.4.5" + sources."lightning-3.3.11" + sources."ws-7.5.0" ]; }) (sources."ln-sync-0.4.5" // { dependencies = [ sources."@grpc/grpc-js-1.2.11" sources."@grpc/proto-loader-0.5.6" + sources."@types/express-4.17.11" sources."@types/node-14.14.35" sources."@types/ws-7.4.0" sources."asyncjs-util-1.2.4" @@ -67955,22 +67964,11 @@ in sources."psbt-1.1.8" ]; }) - (sources."ln-telegram-3.2.3" // { + (sources."ln-telegram-3.2.5" // { dependencies = [ - sources."ajv-8.5.0" - sources."ansi-regex-5.0.0" - sources."bech32-2.0.0" sources."bn.js-5.2.0" - sources."is-fullwidth-code-point-3.0.0" - sources."json-schema-traverse-1.0.0" - (sources."ln-service-51.7.0" // { - dependencies = [ - sources."invoices-1.1.7" - ]; - }) - sources."string-width-4.2.2" - sources."strip-ansi-6.0.0" - sources."table-6.7.0" + sources."goldengate-10.0.6" + sources."ln-service-51.8.2" ]; }) sources."lodash-4.17.21" @@ -67983,6 +67981,13 @@ in sources."lodash.padstart-4.6.1" sources."lodash.truncate-4.4.2" sources."lodash.uniq-4.5.0" + (sources."log-symbols-4.1.0" // { + dependencies = [ + sources."ansi-styles-4.3.0" + sources."chalk-4.1.1" + sources."supports-color-7.2.0" + ]; + }) sources."long-4.0.0" sources."lowercase-keys-1.0.1" sources."lru-cache-6.0.0" @@ -68032,11 +68037,24 @@ in sources."on-headers-1.0.2" sources."once-1.4.0" sources."onetime-1.1.0" + (sources."ora-5.4.1" // { + dependencies = [ + sources."ansi-regex-5.0.0" + sources."ansi-styles-4.3.0" + sources."chalk-4.1.1" + sources."cli-cursor-3.1.0" + sources."onetime-5.1.2" + sources."restore-cursor-3.1.0" + sources."strip-ansi-6.0.0" + sources."supports-color-7.2.0" + ]; + }) sources."os-shim-0.1.3" sources."os-tmpdir-1.0.2" sources."p-cancelable-1.1.0" sources."p-timeout-4.1.0" sources."package-json-6.5.0" + sources."paid-services-2.0.0" sources."parseurl-1.3.3" sources."path-to-regexp-0.1.7" sources."performance-now-2.1.0" @@ -68044,42 +68062,19 @@ in sources."pinkie-promise-2.0.1" sources."prepend-http-2.0.0" sources."prettyjson-1.2.1" - (sources."probing-1.3.5" // { + (sources."probing-1.3.6" // { dependencies = [ - sources."@grpc/grpc-js-1.2.11" - sources."@grpc/proto-loader-0.5.6" - sources."@types/node-14.14.35" - sources."@types/ws-7.4.0" - sources."asyncjs-util-1.2.4" - sources."bech32-2.0.0" - sources."bn.js-5.2.0" - sources."bolt09-0.1.3" - sources."cbor-7.0.4" - sources."invoices-1.1.7" - (sources."lightning-3.3.1" // { - dependencies = [ - sources."asyncjs-util-1.2.3" - sources."bolt07-1.7.1" - sources."invoices-1.1.6" - ]; - }) - (sources."ln-service-51.5.0" // { - dependencies = [ - sources."bolt07-1.7.1" - sources."invoices-1.1.6" - ]; - }) - sources."psbt-1.1.8" + sources."ln-service-51.8.2" ]; }) sources."process-nextick-args-2.0.1" (sources."protobufjs-6.11.2" // { dependencies = [ - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" ]; }) sources."proxy-addr-2.0.7" - (sources."psbt-1.1.9" // { + (sources."psbt-1.1.10" // { dependencies = [ sources."bn.js-5.2.0" ]; @@ -68146,7 +68141,7 @@ in sources."supports-color-2.0.0" (sources."table-6.7.1" // { dependencies = [ - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."ansi-regex-5.0.0" sources."is-fullwidth-code-point-3.0.0" sources."json-schema-traverse-1.0.0" @@ -68207,6 +68202,7 @@ in sources."varuint-bitcoin-1.1.2" sources."vary-1.1.2" sources."verror-1.10.0" + sources."wcwidth-1.0.1" (sources."widest-line-3.1.0" // { dependencies = [ sources."ansi-regex-5.0.0" @@ -68234,7 +68230,7 @@ in }) sources."wrappy-1.0.2" sources."write-file-atomic-3.0.3" - sources."ws-7.4.4" + sources."ws-7.4.6" sources."xdg-basedir-4.0.0" sources."y18n-5.0.8" sources."yallist-4.0.0" @@ -68246,7 +68242,7 @@ in sources."strip-ansi-6.0.0" ]; }) - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -68337,8 +68333,8 @@ in sources."levn-0.3.0" sources."lodash-4.17.21" sources."lodash.sortby-4.7.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."nwsapi-2.2.0" sources."oauth-sign-0.9.0" @@ -68385,7 +68381,7 @@ in sources."whatwg-url-6.5.0" sources."word-wrap-1.2.3" sources."wrappy-1.0.2" - sources."ws-5.2.2" + sources."ws-5.2.3" sources."xml-name-validator-3.0.0" ]; buildInputs = globalBuildInputs; @@ -68788,11 +68784,11 @@ in sha512 = "QHoiW1H2P6Sx7L5IEvbZnnQsfy7eaibY/KS2UAX9VINXNdGS9RxqEdLOe9yTdcy5pzIFpQKIBspOnHcBOjVa8A=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/highlight-7.14.0" - sources."@babel/parser-7.14.4" - sources."@babel/types-7.14.4" + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/highlight-7.14.5" + sources."@babel/parser-7.14.7" + sources."@babel/types-7.14.5" sources."@kwsites/file-exists-1.1.1" sources."@kwsites/promise-deferred-1.1.1" sources."@types/minimist-1.2.1" @@ -68908,7 +68904,7 @@ in sources."map-obj-1.0.1" ]; }) - sources."decimal.js-10.2.1" + sources."decimal.js-10.3.0" sources."delayed-stream-1.0.0" sources."denque-1.5.0" sources."depd-1.1.2" @@ -69039,8 +69035,8 @@ in sources."merkle-lib-2.0.10" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."min-indent-1.0.1" sources."minimalistic-assert-1.0.1" sources."minimalistic-crypto-utils-1.0.1" @@ -69161,7 +69157,7 @@ in sources."set-blocking-2.0.0" sources."setprototypeof-1.1.1" sources."sha.js-2.4.11" - sources."simple-git-2.39.0" + sources."simple-git-2.40.0" sources."spdx-correct-3.1.1" sources."spdx-exceptions-2.3.0" sources."spdx-expression-parse-3.0.1" @@ -69219,7 +69215,7 @@ in sources."yargs-parser-13.1.2" ]; }) - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -69251,7 +69247,7 @@ in sources."@protobufjs/pool-1.1.0" sources."@protobufjs/utf8-1.1.0" sources."@types/long-4.0.1" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."addr-to-ip-port-1.5.1" sources."airplay-js-0.2.16" sources."ajv-6.12.6" @@ -69391,7 +69387,7 @@ in sources."internal-ip-1.2.0" sources."ip-1.1.5" sources."ip-set-1.0.2" - sources."ipaddr.js-2.0.0" + sources."ipaddr.js-2.0.1" sources."is-arrayish-0.2.1" sources."is-core-module-2.4.0" sources."is-finite-1.1.0" @@ -69432,8 +69428,8 @@ in ]; }) sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" sources."minimist-1.2.5" @@ -69542,7 +69538,7 @@ in sources."router-0.6.2" sources."run-parallel-1.2.0" sources."run-series-1.1.9" - sources."rusha-0.8.13" + sources."rusha-0.8.14" sources."rx-2.5.3" sources."safe-buffer-5.2.1" sources."safer-buffer-2.1.2" @@ -69657,10 +69653,10 @@ in cdk8s-cli = nodeEnv.buildNodePackage { name = "cdk8s-cli"; packageName = "cdk8s-cli"; - version = "1.0.0-beta.18"; + version = "1.0.0-beta.26"; src = fetchurl { - url = "https://registry.npmjs.org/cdk8s-cli/-/cdk8s-cli-1.0.0-beta.18.tgz"; - sha512 = "eT0Z2u8yB8gMAIOMJ76TjeCQZ8nzxSbN/Y87cbzhT9I6vyLjgCw/w+48XXudOfW63kY2/TugWtZE+mwQlu3QXw=="; + url = "https://registry.npmjs.org/cdk8s-cli/-/cdk8s-cli-1.0.0-beta.26.tgz"; + sha512 = "+ikLey611rDoxLBiYuFaNJZxZ1ytCppSEzW+wBIfV5mkyV8Ug5ldHuFzpeUxShZToyzqq8TwhQ5A3CGTU0tSJw=="; }; dependencies = [ sources."@jsii/spec-1.30.0" @@ -69672,7 +69668,8 @@ in sources."call-bind-1.0.2" sources."camelcase-6.2.0" sources."case-1.6.3" - sources."cdk8s-1.0.0-beta.14" + sources."cdk8s-1.0.0-beta.24" + sources."cdk8s-plus-17-1.0.0-beta.30" sources."cliui-7.0.4" sources."clone-2.1.2" (sources."codemaker-1.30.0" // { @@ -69684,7 +69681,7 @@ in sources."color-name-1.1.4" sources."colors-1.4.0" sources."commonmark-0.29.3" - sources."constructs-3.3.75" + sources."constructs-3.3.87" sources."date-format-3.0.0" sources."debug-4.3.2" sources."decamelize-5.0.0" @@ -69757,13 +69754,13 @@ in sources."yargs-16.2.0" ]; }) - (sources."jsii-srcmak-0.1.273" // { + (sources."jsii-srcmak-0.1.290" // { dependencies = [ sources."fs-extra-9.1.0" ]; }) sources."json-schema-0.3.0" - sources."json2jsii-0.1.236" + sources."json2jsii-0.1.257" sources."jsonfile-6.1.0" sources."jsonschema-1.4.0" sources."locate-path-5.0.0" @@ -69799,7 +69796,7 @@ in sources."snake-case-3.0.4" sources."sort-json-2.0.0" sources."spdx-license-list-6.4.0" - sources."sscaff-1.2.0" + sources."sscaff-1.2.10" (sources."streamroller-2.2.4" // { dependencies = [ sources."date-format-2.1.0" @@ -69810,8 +69807,8 @@ in sources."string.prototype.trimend-1.0.4" sources."string.prototype.trimstart-1.0.4" sources."strip-ansi-6.0.0" - sources."tslib-2.2.0" - sources."typescript-3.9.9" + sources."tslib-2.3.0" + sources."typescript-3.9.10" sources."unbox-primitive-1.0.1" sources."universalify-2.0.0" sources."which-boxed-primitive-1.0.2" @@ -69834,7 +69831,7 @@ in sources."yargs-parser-18.1.3" ]; }) - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -69848,17 +69845,17 @@ in cdktf-cli = nodeEnv.buildNodePackage { name = "cdktf-cli"; packageName = "cdktf-cli"; - version = "0.4.0"; + version = "0.4.1"; src = fetchurl { - url = "https://registry.npmjs.org/cdktf-cli/-/cdktf-cli-0.4.0.tgz"; - sha512 = "2mJA2Kq8mCcTzfHbNnogPWj/OVtPFEtzgL00hxPyLIKaQz7gX0Sagej18qp7kPh0pVA5Qenm5jVST3GdkjoX6A=="; + url = "https://registry.npmjs.org/cdktf-cli/-/cdktf-cli-0.4.1.tgz"; + sha512 = "bDK7F4MQFFgzkZBoxMimSu297IJ4duhG1ZpOGG/YcQ9MF/IuIKqlxV6WhWUEfPupnSuZuDQMNCRf/PhKsWcy9Q=="; }; dependencies = [ - sources."@cdktf/hcl2json-0.4.0" + sources."@cdktf/hcl2json-0.4.1" sources."@jsii/spec-1.30.0" sources."@skorfmann/ink-confirm-input-3.0.0" sources."@skorfmann/terraform-cloud-1.10.1" - sources."@types/node-14.17.1" + sources."@types/node-14.17.4" sources."@types/node-fetch-2.5.10" sources."@types/yauzl-2.9.1" sources."@types/yoga-layout-1.9.2" @@ -69892,7 +69889,7 @@ in sources."camelcase-5.3.1" sources."camelcase-keys-6.2.2" sources."case-1.6.3" - sources."cdktf-0.4.0" + sources."cdktf-0.4.1" sources."chalk-4.1.1" sources."ci-info-2.0.0" sources."cli-boxes-2.2.1" @@ -69914,7 +69911,7 @@ in sources."commonmark-0.29.3" sources."compress-commons-4.1.1" sources."concat-map-0.0.1" - sources."constructs-3.3.75" + sources."constructs-3.3.87" sources."convert-to-spaces-1.0.2" sources."core-util-is-1.0.2" sources."crc-32-1.2.0" @@ -70033,7 +70030,7 @@ in sources."yargs-16.2.0" ]; }) - (sources."jsii-srcmak-0.1.273" // { + (sources."jsii-srcmak-0.1.290" // { dependencies = [ sources."fs-extra-9.1.0" sources."jsonfile-6.1.0" @@ -70059,8 +70056,8 @@ in sources."lru-cache-6.0.0" sources."map-obj-4.2.1" sources."mdurl-1.0.1" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."minimatch-3.0.4" sources."minimist-1.2.5" @@ -70116,7 +70113,7 @@ in sources."slice-ansi-3.0.0" sources."sort-json-2.0.0" sources."spdx-license-list-6.4.0" - sources."sscaff-1.2.0" + sources."sscaff-1.2.10" sources."stack-utils-2.0.3" sources."stream-buffers-3.0.2" (sources."streamroller-2.2.4" // { @@ -70143,7 +70140,7 @@ in sources."supports-color-7.2.0" sources."tar-stream-2.2.0" sources."type-fest-0.15.1" - sources."typescript-3.9.9" + sources."typescript-3.9.10" sources."unbox-primitive-1.0.1" sources."universalify-0.1.2" sources."util-deprecate-1.0.2" @@ -70155,7 +70152,7 @@ in sources."widest-line-3.1.0" sources."wrap-ansi-6.2.0" sources."wrappy-1.0.2" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xmlbuilder-15.1.1" sources."xmldom-0.6.0" sources."y18n-5.0.8" @@ -70167,7 +70164,7 @@ in sources."yargs-parser-18.1.3" ]; }) - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" sources."yauzl-2.10.0" sources."yn-3.1.1" sources."yoga-layout-prebuilt-1.10.0" @@ -70305,10 +70302,10 @@ in coc-clangd = nodeEnv.buildNodePackage { name = "coc-clangd"; packageName = "coc-clangd"; - version = "0.9.0"; + version = "0.11.0"; src = fetchurl { - url = "https://registry.npmjs.org/coc-clangd/-/coc-clangd-0.9.0.tgz"; - sha512 = "QmYLkObs561ld4vqvivzgVpGGpjsx+d0+x2slqKPvB80juKfaZbfcBxttkcAa6giB6qKFU4njhyz4pP54JebZg=="; + url = "https://registry.npmjs.org/coc-clangd/-/coc-clangd-0.11.0.tgz"; + sha512 = "RxYUkfb1HO+ZI62tB0JhqmxYgTrtlS8f3a6+gbFDkEkOCdoCG3GiQBlbV6JjQwdoK7LwNWPxeocJjqoA53ZLnQ=="; }; buildInputs = globalBuildInputs; meta = { @@ -70417,10 +70414,10 @@ in coc-explorer = nodeEnv.buildNodePackage { name = "coc-explorer"; packageName = "coc-explorer"; - version = "0.17.5"; + version = "0.18.3"; src = fetchurl { - url = "https://registry.npmjs.org/coc-explorer/-/coc-explorer-0.17.5.tgz"; - sha512 = "a5GHhsPEFcby7CkhnpkWyLei/SCcon3Z/Li1Jvxr/h6bewDHFNXA5DZSDJWvhLnktGcwZNBOWGBBZhPWFGYAaA=="; + url = "https://registry.npmjs.org/coc-explorer/-/coc-explorer-0.18.3.tgz"; + sha512 = "0bYcyZiiH+XlWjtBXGPUNAizDmdz8LFGvazTlOiurij06s1KKzE5gw9waUlbPdnlVwbNpoUkdTZ1mIEPn0bgLg=="; }; dependencies = [ sources."@sindresorhus/df-3.1.1" @@ -70460,11 +70457,11 @@ in sources."pify-2.3.0" ]; }) - sources."move-file-2.0.0" + sources."move-file-2.1.0" sources."npm-run-path-3.1.0" sources."once-1.4.0" sources."onetime-5.1.2" - sources."open-8.2.0" + sources."open-8.2.1" sources."os-homedir-1.0.2" sources."p-finally-2.0.1" sources."p-map-4.0.0" @@ -70482,7 +70479,7 @@ in sources."signal-exit-3.0.3" sources."slash-1.0.0" sources."strip-final-newline-2.0.0" - sources."trash-7.1.1" + sources."trash-7.2.0" sources."user-home-2.0.0" sources."uuid-8.3.2" sources."which-2.0.2" @@ -70503,10 +70500,10 @@ in coc-git = nodeEnv.buildNodePackage { name = "coc-git"; packageName = "coc-git"; - version = "2.3.3"; + version = "2.3.5"; src = fetchurl { - url = "https://registry.npmjs.org/coc-git/-/coc-git-2.3.3.tgz"; - sha512 = "xBdnbesjfMVHYjoCCpLReurLFVIVyvN/Xd+T0/oETLs0lotn1p5F3cZPRiZD0jxtCLMV72dqN/Kuro98HoNplg=="; + url = "https://registry.npmjs.org/coc-git/-/coc-git-2.3.5.tgz"; + sha512 = "cuWQcWuPKpFAwcED+EfKtGSsGifJJkAtVh5CGBTDbadNQfHdtj63DF+H3YdlM/bQWgsQMfnjxA+AH/yifBg+Ow=="; }; dependencies = [ sources."lru-cache-6.0.0" @@ -70534,7 +70531,7 @@ in dependencies = [ sources."isexe-2.0.0" sources."node-fetch-2.6.1" - sources."tslib-2.2.0" + sources."tslib-2.3.0" sources."vscode-languageserver-textdocument-1.0.1" sources."vscode-uri-3.0.2" sources."which-2.0.2" @@ -70574,7 +70571,7 @@ in sha512 = "7SHQYzpRKPrpaLcTm1UUk1zu9VvFEJKFqxwDIuqv/CL0cBTtEvlsfpVh9DOaMHlZPu8U8Lgyf04bHV/sFS1zJw=="; }; dependencies = [ - sources."typescript-4.3.2" + sources."typescript-4.3.4" ]; buildInputs = globalBuildInputs; meta = { @@ -70642,11 +70639,39 @@ in coc-json = nodeEnv.buildNodePackage { name = "coc-json"; packageName = "coc-json"; - version = "1.3.4"; + version = "1.3.6"; src = fetchurl { - url = "https://registry.npmjs.org/coc-json/-/coc-json-1.3.4.tgz"; - sha512 = "IK3JYMiJALMMhUlFgl4HxW2dvJdmUr86Hve+ngVATLpT2vWHG5V3sXjuHq7c7RlE7+oWS2CNoxIPf8oiuZesPQ=="; + url = "https://registry.npmjs.org/coc-json/-/coc-json-1.3.6.tgz"; + sha512 = "iUKVNmYMZEBpniRRy7iXzcYqDCfamRMU4OOb1b9M9Zi68xbwsu1JVl0ARw5FVCv40ELszK+w/6jKlpS97kTU8w=="; }; + dependencies = [ + sources."agent-base-4.3.0" + sources."balanced-match-1.0.2" + sources."brace-expansion-1.1.11" + sources."concat-map-0.0.1" + sources."debug-3.1.0" + sources."es6-promise-4.2.8" + sources."es6-promisify-5.0.0" + sources."http-proxy-agent-2.1.0" + sources."https-proxy-agent-2.2.4" + sources."jsonc-parser-3.0.0" + sources."minimatch-3.0.4" + sources."ms-2.0.0" + sources."request-light-0.4.0" + sources."vscode-json-languageserver-1.3.4" + (sources."vscode-json-languageservice-4.1.4" // { + dependencies = [ + sources."vscode-nls-5.0.0" + ]; + }) + sources."vscode-jsonrpc-6.0.0" + sources."vscode-languageserver-7.0.0" + sources."vscode-languageserver-protocol-3.16.0" + sources."vscode-languageserver-textdocument-1.0.1" + sources."vscode-languageserver-types-3.16.0" + sources."vscode-nls-4.1.2" + sources."vscode-uri-3.0.2" + ]; buildInputs = globalBuildInputs; meta = { description = "Json extension for coc.nvim"; @@ -70659,10 +70684,10 @@ in coc-lists = nodeEnv.buildNodePackage { name = "coc-lists"; packageName = "coc-lists"; - version = "1.4.1"; + version = "1.4.2"; src = fetchurl { - url = "https://registry.npmjs.org/coc-lists/-/coc-lists-1.4.1.tgz"; - sha512 = "A87irHxQ97+VkgM8SgTLZDyOT/t7V0uMqg/Jk1hx+TQVsAZljBNZq88yaUZIo6SBfmeHroGUUzFs597GJf7N5Q=="; + url = "https://registry.npmjs.org/coc-lists/-/coc-lists-1.4.2.tgz"; + sha512 = "p8FdQN+nP/JDb816U3FoU1uTPncxCeE3i+rWJSM+wzyDKeZLcx5Szpkq9ao06fL33N+RWTghEJrEeMLjq6+Q9A=="; }; buildInputs = globalBuildInputs; meta = { @@ -70851,7 +70876,7 @@ in sources."strip-json-comments-2.0.1" sources."tar-6.1.0" sources."traverse-0.3.9" - sources."tslib-2.2.0" + sources."tslib-2.3.0" sources."unbox-primitive-1.0.1" sources."universalify-0.1.2" sources."unzipper-0.10.11" @@ -70908,18 +70933,14 @@ in }; dependencies = [ sources."@babel/code-frame-7.12.11" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" sources."escape-string-regexp-1.0.5" ]; }) - (sources."@eslint/eslintrc-0.4.1" // { - dependencies = [ - sources."globals-12.4.0" - ]; - }) + sources."@eslint/eslintrc-0.4.2" sources."@mrmlnc/readdir-enhanced-2.2.1" sources."@nodelib/fs.stat-1.1.3" sources."@types/eslint-visitor-keys-1.0.0" @@ -70989,7 +71010,7 @@ in sources."callsites-3.1.0" sources."camelcase-2.1.1" sources."camelcase-keys-2.1.0" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."capture-stack-trace-1.0.1" sources."ccount-1.1.0" (sources."chalk-4.1.1" // { @@ -71051,7 +71072,7 @@ in ]; }) sources."copy-descriptor-0.1.1" - sources."core-js-3.13.1" + sources."core-js-3.15.1" sources."cosmiconfig-3.1.0" sources."create-error-class-3.0.2" sources."cross-spawn-7.0.3" @@ -71087,14 +71108,14 @@ in sources."domutils-1.7.0" sources."dot-prop-5.3.0" sources."duplexer3-0.1.4" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" sources."emoji-regex-8.0.0" sources."end-of-stream-1.4.4" sources."enquirer-2.3.6" sources."entities-1.1.2" sources."error-ex-1.3.2" sources."escape-string-regexp-4.0.0" - (sources."eslint-7.27.0" // { + (sources."eslint-7.29.0" // { dependencies = [ sources."eslint-visitor-keys-2.1.0" ]; @@ -71228,11 +71249,7 @@ in sources."glob-parent-5.1.2" sources."glob-to-regexp-0.3.0" sources."global-dirs-0.1.1" - (sources."globals-13.9.0" // { - dependencies = [ - sources."type-fest-0.20.2" - ]; - }) + sources."globals-13.9.0" (sources."globby-6.1.0" // { dependencies = [ sources."pify-2.3.0" @@ -71547,7 +71564,7 @@ in sources."prelude-ls-1.2.1" sources."prepend-http-1.0.4" sources."preserve-0.2.0" - sources."prettier-2.3.0" + sources."prettier-2.3.1" sources."prettier-eslint-12.0.0" (sources."prettier-stylelint-0.4.2" // { dependencies = [ @@ -71602,7 +71619,7 @@ in }) sources."regex-cache-0.4.4" sources."regex-not-1.0.2" - sources."regexpp-3.1.0" + sources."regexpp-3.2.0" sources."registry-auth-token-3.4.0" sources."registry-url-3.1.0" sources."remark-8.0.0" @@ -71758,7 +71775,7 @@ in sources."svg-tags-1.0.0" (sources."table-6.7.1" // { dependencies = [ - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."json-schema-traverse-1.0.0" ]; }) @@ -71790,8 +71807,8 @@ in }) sources."tsutils-3.21.0" sources."type-check-0.4.0" - sources."type-fest-0.8.1" - sources."typescript-3.9.9" + sources."type-fest-0.20.2" + sources."typescript-3.9.10" sources."unherit-1.1.3" sources."unified-6.2.0" sources."union-value-1.0.1" @@ -71890,13 +71907,13 @@ in coc-pyright = nodeEnv.buildNodePackage { name = "coc-pyright"; packageName = "coc-pyright"; - version = "1.1.144"; + version = "1.1.150"; src = fetchurl { - url = "https://registry.npmjs.org/coc-pyright/-/coc-pyright-1.1.144.tgz"; - sha512 = "bUb/GuY0QjlDAws60UNDL8ZiRzp6sLmSqRkMyAAUEb9arsSphvok80P3i/NEsJhG2lgx2LaEz1mKUCnR+UjTlA=="; + url = "https://registry.npmjs.org/coc-pyright/-/coc-pyright-1.1.150.tgz"; + sha512 = "+dWSYM9AfBsYeOclQNmuHcw9aKWwL6XICmPm64N9peWE+oXqMOAShaH5xO+JV+r88R0wTN/LJaEwGHlkxJD2XA=="; }; dependencies = [ - sources."pyright-1.1.145" + sources."pyright-1.1.151" ]; buildInputs = globalBuildInputs; meta = { @@ -71970,10 +71987,10 @@ in coc-rust-analyzer = nodeEnv.buildNodePackage { name = "coc-rust-analyzer"; packageName = "coc-rust-analyzer"; - version = "0.46.0"; + version = "0.46.2"; src = fetchurl { - url = "https://registry.npmjs.org/coc-rust-analyzer/-/coc-rust-analyzer-0.46.0.tgz"; - sha512 = "KwkFaDNBwZtqdahUPKYKoCb0nvLZ1wu5L2/8kpK94IMDgNPy3TUTxujtwDjLwjYo/z+W5reRfwIYNJZ3FZ2Onw=="; + url = "https://registry.npmjs.org/coc-rust-analyzer/-/coc-rust-analyzer-0.46.2.tgz"; + sha512 = "uEFyQAaWQ60qY2q74jXn8Wk73QMekHVSRKuBP178uVV/xAhyd24psr+pNrdZxXVZGBRwuRLgHFd+N5YhikOBMw=="; }; buildInputs = globalBuildInputs; meta = { @@ -72023,10 +72040,10 @@ in coc-solargraph = nodeEnv.buildNodePackage { name = "coc-solargraph"; packageName = "coc-solargraph"; - version = "1.2.0"; + version = "1.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/coc-solargraph/-/coc-solargraph-1.2.0.tgz"; - sha512 = "0bvily8jnfmBx/WjNgZ/1TNVSV2BBSsaAflc4bhwtw1mN7XLAiXLpeK3Eps6qwOYMtTRngJFKxNXKoAM2bCY/A=="; + url = "https://registry.npmjs.org/coc-solargraph/-/coc-solargraph-1.2.1.tgz"; + sha512 = "7e+5qluZxgGrw3l/3ib3BLPm2XlfHp1Gxkcb33vmJAw4CC0TDCB+pw2DyWPVGC3t68rLGGAzo5pYCtaGRoxojw=="; }; buildInputs = globalBuildInputs; meta = { @@ -72046,35 +72063,36 @@ in sha512 = "+GYR6KTvHQnqu0j1kXT30hRZMuCwG/G52wG/19LSPE+p9Q0i8XFH6582T0btTu39xz2TPsDOGjT1VgyRw2urug=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" - sources."@babel/core-7.14.3" - sources."@babel/generator-7.14.3" - sources."@babel/helper-compilation-targets-7.14.4" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helpers-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" + sources."@babel/core-7.14.6" + sources."@babel/generator-7.14.5" + sources."@babel/helper-compilation-targets-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helpers-7.14.6" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" ]; }) - sources."@babel/parser-7.14.4" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@babel/parser-7.14.7" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."@stylelint/postcss-css-in-js-0.37.2" sources."@stylelint/postcss-markdown-0.36.2" sources."@types/mdast-3.0.3" @@ -72082,7 +72100,7 @@ in sources."@types/normalize-package-data-2.4.0" sources."@types/parse-json-4.0.0" sources."@types/unist-2.0.3" - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."ansi-regex-5.0.0" sources."ansi-styles-3.2.1" sources."array-union-2.1.0" @@ -72101,7 +72119,7 @@ in sources."callsites-3.1.0" sources."camelcase-5.3.1" sources."camelcase-keys-6.2.2" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" (sources."chalk-4.1.1" // { dependencies = [ sources."ansi-styles-4.3.0" @@ -72119,7 +72137,7 @@ in sources."color-name-1.1.3" sources."colorette-1.2.2" sources."concat-map-0.0.1" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."cosmiconfig-7.0.0" sources."cssesc-3.0.0" sources."debug-4.3.2" @@ -72139,7 +72157,7 @@ in sources."domelementtype-1.3.1" sources."domhandler-2.4.2" sources."domutils-1.7.0" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" sources."emoji-regex-8.0.0" sources."entities-1.1.2" sources."error-ex-1.3.2" @@ -72166,7 +72184,7 @@ in sources."global-modules-2.0.0" sources."global-prefix-3.0.0" sources."globals-11.12.0" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."globjoin-0.1.4" sources."gonzales-pe-4.3.0" sources."hard-rejection-2.1.0" @@ -72236,7 +72254,7 @@ in ]; }) sources."ms-2.1.2" - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" (sources."normalize-package-data-3.0.2" // { dependencies = [ sources."semver-7.3.5" @@ -72258,7 +72276,7 @@ in sources."path-parse-1.0.7" sources."path-type-4.0.0" sources."picomatch-2.3.0" - (sources."postcss-7.0.35" // { + (sources."postcss-7.0.36" // { dependencies = [ (sources."chalk-2.4.2" // { dependencies = [ @@ -72369,7 +72387,7 @@ in sources."write-file-atomic-3.0.3" sources."yallist-4.0.0" sources."yaml-1.10.2" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" sources."zwitch-1.0.5" ]; buildInputs = globalBuildInputs; @@ -72401,10 +72419,10 @@ in coc-texlab = nodeEnv.buildNodePackage { name = "coc-texlab"; packageName = "coc-texlab"; - version = "3.0.2"; + version = "3.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/coc-texlab/-/coc-texlab-3.0.2.tgz"; - sha512 = "YiPB0gasof89HqAGz55BICHtt9gDyTjsNY1mwdKkJP0ZmgSxub5q+hOYYbay56X4+348Raxx0fp75JI8ax1nAw=="; + url = "https://registry.npmjs.org/coc-texlab/-/coc-texlab-3.2.0.tgz"; + sha512 = "E4RgWfRcqbgRfc2L4dJrsDRV/wsjqV31H+yiAfREg2JfxC26q7QRcQU9KILHSgVjpQ7VqXpcmDxcT2jn5YzIwA=="; }; buildInputs = globalBuildInputs; meta = { @@ -72425,9 +72443,9 @@ in sha512 = "5Zxv2Adtb6Mlpv2YdKErhf8ntxiBl1UyrbEqo7gR9nFIAfi3o0Ue6TJTpZfOhQViFQxLjJAS65IQVRaNlbhkxw=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/highlight-7.14.0" + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/highlight-7.14.5" sources."ansi-styles-3.2.1" sources."argparse-1.0.10" sources."balanced-match-1.0.2" @@ -72464,7 +72482,7 @@ in sources."tslib-1.14.1" sources."tslint-5.20.1" sources."tsutils-2.29.0" - sources."typescript-3.9.9" + sources."typescript-3.9.10" sources."wrappy-1.0.2" ]; buildInputs = globalBuildInputs; @@ -72513,13 +72531,13 @@ in coc-tsserver = nodeEnv.buildNodePackage { name = "coc-tsserver"; packageName = "coc-tsserver"; - version = "1.7.0"; + version = "1.8.1"; src = fetchurl { - url = "https://registry.npmjs.org/coc-tsserver/-/coc-tsserver-1.7.0.tgz"; - sha512 = "Kye0Bn4ifhNhKFcenXg0z8iNzkBGOCXCb552sY/L55+4+08WU02impRnuYkEwFo2QAjDrRQNYjUfUabRR4LC+A=="; + url = "https://registry.npmjs.org/coc-tsserver/-/coc-tsserver-1.8.1.tgz"; + sha512 = "qkVsa46XLmOCmohpQhhz1SG9vUQN/54b/zZsDI5fnuBM49GX9f+Aya8m9ZidAzuwFKV+ostgvdWaB+GeQPPNPQ=="; }; dependencies = [ - sources."typescript-4.3.2" + sources."typescript-4.3.4" ]; buildInputs = globalBuildInputs; meta = { @@ -72534,25 +72552,21 @@ in coc-vetur = nodeEnv.buildNodePackage { name = "coc-vetur"; packageName = "coc-vetur"; - version = "1.2.4"; + version = "1.2.5"; src = fetchurl { - url = "https://registry.npmjs.org/coc-vetur/-/coc-vetur-1.2.4.tgz"; - sha512 = "9ZEPHykSx2J/OwLFocXSK1Bg4p35AegacFb0ZaWV9s0IEtdNSkYi25Y9CscqV6fQheMfyEl0f4rlI4yh6DbcPg=="; + url = "https://registry.npmjs.org/coc-vetur/-/coc-vetur-1.2.5.tgz"; + sha512 = "pBh7Jrn+L4hj6E6JxAwGdjVB/9v2TuJEMYUhDFR41s/zBJG2cXxzgUVmGz8RWYd70HdEz2ula1FcRA4rjkjPXg=="; }; dependencies = [ sources."@babel/code-frame-7.12.11" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" sources."escape-string-regexp-1.0.5" ]; }) - (sources."@eslint/eslintrc-0.4.1" // { - dependencies = [ - sources."globals-12.4.0" - ]; - }) + sources."@eslint/eslintrc-0.4.2" sources."acorn-7.4.1" sources."acorn-jsx-5.3.1" sources."ajv-6.12.6" @@ -72586,8 +72600,8 @@ in sources."emoji-regex-8.0.0" sources."enquirer-2.3.6" sources."escape-string-regexp-4.0.0" - sources."eslint-7.27.0" - sources."eslint-plugin-vue-7.10.0" + sources."eslint-7.29.0" + sources."eslint-plugin-vue-7.11.1" sources."eslint-scope-5.1.1" (sources."eslint-utils-2.1.0" // { dependencies = [ @@ -72624,11 +72638,7 @@ in sources."functional-red-black-tree-1.0.1" sources."glob-7.1.7" sources."glob-parent-5.1.2" - (sources."globals-13.9.0" // { - dependencies = [ - sources."type-fest-0.20.2" - ]; - }) + sources."globals-13.9.0" sources."has-1.0.3" sources."has-flag-3.0.0" sources."ignore-4.0.6" @@ -72663,10 +72673,10 @@ in sources."path-key-3.1.1" sources."path-parse-1.0.7" sources."prelude-ls-1.2.1" - sources."prettier-2.3.0" + sources."prettier-2.3.1" sources."progress-2.0.3" sources."punycode-2.1.1" - sources."regexpp-3.1.0" + sources."regexpp-3.2.0" sources."require-from-string-2.0.2" sources."resolve-1.20.0" sources."resolve-from-4.0.0" @@ -72688,7 +72698,7 @@ in sources."supports-color-5.5.0" (sources."table-6.7.1" // { dependencies = [ - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."json-schema-traverse-1.0.0" ]; }) @@ -72703,11 +72713,11 @@ in }) sources."tsutils-2.29.0" sources."type-check-0.4.0" - sources."type-fest-0.8.1" - sources."typescript-4.3.2" + sources."type-fest-0.20.2" + sources."typescript-4.3.4" sources."uri-js-4.4.1" sources."v8-compile-cache-2.3.0" - sources."vls-0.7.2" + sources."vls-0.7.4" (sources."vue-eslint-parser-7.6.0" // { dependencies = [ sources."eslint-visitor-keys-1.3.0" @@ -72996,10 +73006,10 @@ in }; dependencies = [ sources."@netflix/nerror-1.1.3" - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" - sources."@npmcli/git-2.0.9" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" + sources."@npmcli/git-2.1.0" sources."@npmcli/installed-package-contents-1.0.7" sources."@npmcli/move-file-1.1.2" sources."@npmcli/node-gyp-1.0.2" @@ -73208,7 +73218,7 @@ in sources."glob-7.1.7" sources."glob-parent-5.1.2" sources."global-dirs-2.1.0" - sources."globby-11.0.3" + sources."globby-11.0.4" (sources."got-9.6.0" // { dependencies = [ sources."get-stream-4.1.0" @@ -73329,13 +73339,13 @@ in sources."loud-rejection-2.2.0" sources."lowercase-keys-1.0.1" sources."lru-cache-6.0.0" - sources."macos-release-2.4.1" + sources."macos-release-2.5.0" (sources."make-dir-3.1.0" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."make-fetch-happen-8.0.14" + sources."make-fetch-happen-9.0.3" sources."md5-file-5.0.0" sources."media-typer-0.3.0" sources."merge-descriptors-1.0.1" @@ -73344,8 +73354,8 @@ in sources."methods-1.1.2" sources."micromatch-4.0.4" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -73379,16 +73389,16 @@ in sources."npm-bundled-1.1.2" sources."npm-install-checks-4.0.0" sources."npm-normalize-package-bin-1.0.1" - sources."npm-package-arg-8.1.2" + sources."npm-package-arg-8.1.5" sources."npm-packlist-2.2.2" sources."npm-pick-manifest-6.1.1" - sources."npm-registry-fetch-10.1.2" + sources."npm-registry-fetch-11.0.0" sources."npm-run-path-4.0.1" sources."npmlog-4.1.2" sources."number-is-nan-1.0.1" sources."oauth-sign-0.9.0" sources."object-assign-4.1.1" - sources."objectorarray-1.0.4" + sources."objectorarray-1.0.5" sources."on-finished-2.3.0" sources."on-headers-1.0.2" sources."once-1.4.0" @@ -73413,7 +73423,7 @@ in sources."semver-6.3.0" ]; }) - sources."pacote-11.3.3" + sources."pacote-11.3.4" sources."parent-module-1.0.1" sources."parseurl-1.3.3" sources."path-exists-3.0.0" @@ -73500,7 +73510,7 @@ in sources."slash-3.0.0" sources."smart-buffer-4.1.0" sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."spdx-correct-3.1.1" sources."spdx-exceptions-2.3.0" sources."spdx-expression-parse-3.0.1" @@ -73601,15 +73611,15 @@ in sha512 = "HCpNdBkQy3rw+uARLuIf0YurqsMXYzBa9ihhSAuxYJcNIrqrSq3BstPfr0cQN38AdMrQiO9Dp4hYy7GtGJsLPg=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/highlight-7.14.0" + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/highlight-7.14.5" sources."@mrmlnc/readdir-enhanced-2.2.1" sources."@nodelib/fs.stat-1.1.3" sources."@types/glob-7.1.3" sources."@types/minimatch-3.0.4" sources."@types/minimist-1.2.1" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/normalize-package-data-2.4.0" sources."aggregate-error-3.1.0" sources."ansi-styles-3.2.1" @@ -73980,7 +73990,7 @@ in sources."@cycle/run-3.4.0" sources."@cycle/time-0.10.1" sources."@types/cookiejar-2.1.2" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/superagent-3.8.2" sources."ansi-escapes-3.2.0" sources."ansi-regex-2.1.1" @@ -74061,8 +74071,8 @@ in sources."lru-cache-4.1.5" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."minimist-1.2.5" sources."ms-2.1.3" @@ -74615,8 +74625,8 @@ in sources."merkle-tree-stream-3.0.3" sources."micromatch-3.1.10" sources."mime-2.5.2" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-response-2.1.0" sources."min-document-2.19.0" sources."minimatch-3.0.4" @@ -74728,7 +74738,7 @@ in sources."revalidator-0.1.8" sources."rimraf-2.7.1" sources."run-series-1.1.9" - sources."rusha-0.8.13" + sources."rusha-0.8.14" sources."safe-buffer-5.2.1" sources."safe-regex-1.1.0" sources."safer-buffer-2.1.2" @@ -74895,7 +74905,7 @@ in sources."use-3.1.1" sources."util-deprecate-1.0.2" sources."utile-0.3.0" - (sources."utp-native-2.5.0" // { + (sources."utp-native-2.5.1" // { dependencies = [ sources."node-gyp-build-4.2.3" sources."readable-stream-3.6.0" @@ -74961,9 +74971,9 @@ in sha512 = "4kjsgc/rV+qtH3dTqEnR/ug36yKNjyo5z674ySkD6k08DwlLs10fsP/I+d8BAsbtjpL36bqZxLa9iNgTDqioXQ=="; }; dependencies = [ - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."aggregate-error-3.1.0" sources."array-union-2.1.0" sources."balanced-match-1.0.2" @@ -74982,7 +74992,7 @@ in sources."fs.realpath-1.0.0" sources."glob-7.1.7" sources."glob-parent-5.1.2" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."graceful-fs-4.2.6" sources."ignore-5.1.8" sources."indent-string-4.0.0" @@ -75090,22 +75100,22 @@ in elasticdump = nodeEnv.buildNodePackage { name = "elasticdump"; packageName = "elasticdump"; - version = "6.71.0"; + version = "6.72.0"; src = fetchurl { - url = "https://registry.npmjs.org/elasticdump/-/elasticdump-6.71.0.tgz"; - sha512 = "bx902tD9qzZFnM7YbL9KOqdcE8iW1KKEyxdvE5rEJVdzny7FMHpLRF/YpP+bjKdXvnCcZMNsePqNum+i2qp8Ng=="; + url = "https://registry.npmjs.org/elasticdump/-/elasticdump-6.72.0.tgz"; + sha512 = "sOsFzBwwUkJkP6EZ8cOwz1eFva5sTf6ojhOgl2gplRs7+PkuqGyng/4TnKL3KIFqwE5lFsA66sIh8UQU4Dkecw=="; }; dependencies = [ sources."@fast-csv/format-4.3.5" sources."@fast-csv/parse-4.3.6" - sources."@types/node-14.17.1" + sources."@types/node-14.17.4" sources."JSONStream-1.3.5" sources."ajv-6.12.6" sources."asn1-0.2.4" sources."assert-plus-1.0.0" sources."async-2.6.3" sources."asynckit-0.4.0" - sources."aws-sdk-2.784.0" + sources."aws-sdk-2.920.0" sources."aws-sign2-0.7.0" sources."aws4-1.11.0" sources."base64-js-1.5.1" @@ -75165,8 +75175,8 @@ in sources."lodash.uniq-4.5.0" sources."lossless-json-1.0.4" sources."method-missing-1.2.4" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimist-1.2.5" sources."oauth-sign-0.9.0" sources."p-finally-1.0.0" @@ -75279,6 +75289,7 @@ in sources."jsonfile-4.0.0" sources."keyv-3.1.0" sources."lowercase-keys-1.0.1" + sources."normalize-url-4.5.1" sources."p-cancelable-1.1.0" sources."responselike-1.0.2" sources."semver-6.3.0" @@ -75293,7 +75304,7 @@ in sources."@types/http-cache-semantics-4.0.0" sources."@types/keyv-3.1.1" sources."@types/minimatch-3.0.4" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/responselike-1.0.0" sources."@types/yauzl-2.9.1" sources."abbrev-1.1.1" @@ -75331,7 +75342,7 @@ in sources."bcrypt-pbkdf-1.0.2" sources."bl-4.1.0" sources."bluebird-3.7.2" - sources."boolean-3.1.0" + sources."boolean-3.1.2" sources."brace-expansion-1.1.11" sources."buffer-5.7.1" sources."buffer-alloc-1.2.0" @@ -75340,7 +75351,7 @@ in sources."buffer-fill-1.0.0" sources."buffer-from-1.1.1" sources."cacheable-lookup-5.0.4" - sources."cacheable-request-7.0.1" + sources."cacheable-request-7.0.2" sources."camelcase-2.1.1" sources."camelcase-keys-2.1.0" sources."caseless-0.12.0" @@ -75367,9 +75378,9 @@ in sources."commander-4.1.1" sources."compare-version-0.1.2" sources."concat-map-0.0.1" - sources."config-chain-1.1.12" + sources."config-chain-1.1.13" sources."console-control-strings-1.1.0" - sources."core-js-3.13.1" + sources."core-js-3.15.1" sources."core-util-is-1.0.2" sources."cross-spawn-7.0.3" sources."currently-unhandled-0.4.1" @@ -75525,7 +75536,7 @@ in sources."inflight-1.0.6" sources."inherits-2.0.4" sources."ini-1.3.8" - (sources."inquirer-8.1.0" // { + (sources."inquirer-8.1.1" // { dependencies = [ sources."is-fullwidth-code-point-3.0.0" sources."string-width-4.2.2" @@ -75594,8 +75605,8 @@ in sources."strip-bom-2.0.0" ]; }) - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -75637,7 +75648,7 @@ in sources."semver-5.7.1" ]; }) - sources."normalize-url-4.5.1" + sources."normalize-url-6.1.0" sources."npm-bundled-1.1.2" (sources."npm-conf-1.1.3" // { dependencies = [ @@ -75663,8 +75674,8 @@ in sources."object-keys-0.4.0" sources."once-1.4.0" sources."onetime-5.1.2" - sources."open-8.2.0" - sources."ora-5.4.0" + sources."open-8.2.1" + sources."ora-5.4.1" sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" sources."osenv-0.1.5" @@ -75829,7 +75840,7 @@ in sources."string-width-4.2.2" ]; }) - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" (sources."yarn-or-npm-3.0.1" // { dependencies = [ sources."cross-spawn-6.0.5" @@ -75880,51 +75891,52 @@ in sha512 = "ohjlUXM2v39rDqGIrlyxdcn9ql+4b+X1u90CXNWjYw5wX6C3wTHRfqFfeV8jajYD6Xc+ufn2X1QeZZWhRBXTlA=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" - (sources."@babel/core-7.14.3" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" + (sources."@babel/core-7.14.6" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/generator-7.14.3" - sources."@babel/helper-annotate-as-pure-7.12.13" - (sources."@babel/helper-compilation-targets-7.14.4" // { + sources."@babel/generator-7.14.5" + sources."@babel/helper-annotate-as-pure-7.14.5" + (sources."@babel/helper-compilation-targets-7.14.5" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-plugin-utils-7.13.0" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helpers-7.14.0" - sources."@babel/highlight-7.14.0" - sources."@babel/parser-7.14.4" - sources."@babel/plugin-proposal-object-rest-spread-7.14.4" - sources."@babel/plugin-syntax-jsx-7.12.13" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-plugin-utils-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helpers-7.14.6" + sources."@babel/highlight-7.14.5" + sources."@babel/parser-7.14.7" + sources."@babel/plugin-proposal-object-rest-spread-7.14.7" + sources."@babel/plugin-syntax-jsx-7.14.5" sources."@babel/plugin-syntax-object-rest-spread-7.8.3" - sources."@babel/plugin-transform-destructuring-7.14.4" - sources."@babel/plugin-transform-parameters-7.14.2" - sources."@babel/plugin-transform-react-jsx-7.14.3" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/plugin-transform-destructuring-7.14.7" + sources."@babel/plugin-transform-parameters-7.14.5" + sources."@babel/plugin-transform-react-jsx-7.14.5" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" sources."@sindresorhus/is-4.0.1" sources."@szmarczak/http-timer-4.0.5" sources."@types/cacheable-request-6.0.1" sources."@types/http-cache-semantics-4.0.0" sources."@types/keyv-3.1.1" sources."@types/minimist-1.2.1" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/normalize-package-data-2.4.0" sources."@types/responselike-1.0.0" sources."@types/yoga-layout-1.9.2" @@ -75945,7 +75957,7 @@ in sources."brace-expansion-1.1.11" sources."browserslist-4.16.6" sources."cacheable-lookup-5.0.4" - (sources."cacheable-request-7.0.1" // { + (sources."cacheable-request-7.0.2" // { dependencies = [ sources."get-stream-5.2.0" ]; @@ -75959,7 +75971,7 @@ in sources."quick-lru-4.0.1" ]; }) - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."chalk-2.4.2" sources."ci-info-2.0.0" sources."cli-boxes-2.2.1" @@ -75978,7 +75990,7 @@ in sources."semver-7.3.5" ]; }) - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."convert-to-spaces-1.0.2" sources."cross-spawn-6.0.5" sources."debounce-fn-4.0.0" @@ -75996,7 +76008,7 @@ in }) sources."defer-to-connect-2.0.1" sources."dot-prop-5.3.0" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" sources."emoji-regex-8.0.0" sources."emojilib-2.4.0" sources."end-of-stream-1.4.4" @@ -76093,9 +76105,9 @@ in sources."minimist-options-4.1.0" sources."ms-2.1.2" sources."nice-try-1.0.5" - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" sources."normalize-package-data-2.5.0" - sources."normalize-url-4.5.1" + sources."normalize-url-6.1.0" sources."npm-run-path-2.0.2" sources."object-assign-4.1.1" sources."once-1.4.0" @@ -76207,7 +76219,7 @@ in ]; }) sources."wrappy-1.0.2" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."yallist-4.0.0" sources."yargs-parser-18.1.3" sources."yoga-layout-prebuilt-1.10.0" @@ -76245,9 +76257,9 @@ in version = "1.7.5"; src = ../../applications/video/epgstation; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."ansi-styles-3.2.1" sources."chalk-2.4.2" @@ -76257,7 +76269,7 @@ in sources."@fluentui/date-time-utilities-7.9.1" sources."@fluentui/dom-utilities-1.1.2" sources."@fluentui/keyboard-key-0.2.17" - sources."@fluentui/react-7.170.1" + sources."@fluentui/react-7.172.1" sources."@fluentui/react-focus-7.17.6" sources."@fluentui/react-window-provider-1.0.2" sources."@fluentui/theme-1.7.4" @@ -76271,10 +76283,10 @@ in sources."normalize-path-2.1.1" ]; }) - sources."@microsoft/load-themed-styles-1.10.174" - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@microsoft/load-themed-styles-1.10.185" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" (sources."@npmcli/move-file-1.1.2" // { dependencies = [ sources."rimraf-3.0.2" @@ -76289,7 +76301,7 @@ in sources."@types/connect-3.4.34" sources."@types/engine.io-3.1.5" sources."@types/express-4.17.8" - sources."@types/express-serve-static-core-4.17.20" + sources."@types/express-serve-static-core-4.17.21" sources."@types/fancy-log-1.3.0" sources."@types/glob-7.1.3" sources."@types/hls.js-0.13.1" @@ -76615,7 +76627,7 @@ in sources."constants-browserify-1.0.0" sources."content-disposition-0.5.3" sources."content-type-1.0.4" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."cookie-0.4.0" sources."cookie-signature-1.0.6" (sources."copy-concurrently-1.0.5" // { @@ -77132,8 +77144,8 @@ in ]; }) sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."mimic-response-1.0.1" sources."minimalistic-assert-1.0.1" @@ -77298,7 +77310,7 @@ in sources."object.map-1.0.1" sources."object.pick-1.3.0" sources."object.reduce-1.0.1" - sources."office-ui-fabric-react-7.170.1" + sources."office-ui-fabric-react-7.172.1" sources."on-finished-2.3.0" sources."on-headers-1.0.2" sources."once-1.4.0" @@ -77525,14 +77537,14 @@ in sources."safe-buffer-5.1.2" sources."safe-regex-1.1.0" sources."safer-buffer-2.1.2" - (sources."sass-1.34.0" // { + (sources."sass-1.35.1" // { dependencies = [ sources."anymatch-3.1.2" sources."binary-extensions-2.2.0" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."fsevents-2.3.2" sources."is-binary-path-2.1.0" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" ]; }) sources."sax-1.2.4" @@ -77702,7 +77714,7 @@ in sources."sver-compat-1.5.0" sources."swagger-schema-official-2.0.0-bab6bed" sources."swagger-ui-dist-3.34.0" - sources."tail-2.2.2" + sources."tail-2.2.3" sources."tapable-1.1.3" (sources."tar-4.4.13" // { dependencies = [ @@ -77834,10 +77846,10 @@ in dependencies = [ sources."anymatch-3.1.2" sources."binary-extensions-2.2.0" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."fsevents-2.3.2" sources."is-binary-path-2.1.0" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" ]; }) sources."watchpack-chokidar2-2.0.1" @@ -77895,7 +77907,7 @@ in ]; }) sources."wrappy-1.0.2" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xmlhttprequest-ssl-1.5.5" sources."xtend-4.0.2" sources."y18n-3.2.2" @@ -77941,25 +77953,21 @@ in eslint = nodeEnv.buildNodePackage { name = "eslint"; packageName = "eslint"; - version = "7.27.0"; + version = "7.29.0"; src = fetchurl { - url = "https://registry.npmjs.org/eslint/-/eslint-7.27.0.tgz"; - sha512 = "JZuR6La2ZF0UD384lcbnd0Cgg6QJjiCwhMD6eU4h/VGPcVGwawNNzKU41tgokGXnfjOOyI6QIffthhJTPzzuRA=="; + url = "https://registry.npmjs.org/eslint/-/eslint-7.29.0.tgz"; + sha512 = "82G/JToB9qIy/ArBzIWG9xvvwL3R86AlCjtGw+A29OMZDqhTybz/MByORSukGxeI+YPCR4coYyITKk8BFH9nDA=="; }; dependencies = [ sources."@babel/code-frame-7.12.11" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" sources."escape-string-regexp-1.0.5" ]; }) - (sources."@eslint/eslintrc-0.4.1" // { - dependencies = [ - sources."globals-12.4.0" - ]; - }) + sources."@eslint/eslintrc-0.4.2" sources."acorn-7.4.1" sources."acorn-jsx-5.3.1" sources."ajv-6.12.6" @@ -78025,11 +78033,7 @@ in sources."functional-red-black-tree-1.0.1" sources."glob-7.1.7" sources."glob-parent-5.1.2" - (sources."globals-13.9.0" // { - dependencies = [ - sources."type-fest-0.20.2" - ]; - }) + sources."globals-13.9.0" sources."has-flag-3.0.0" sources."ignore-4.0.6" sources."import-fresh-3.3.0" @@ -78060,7 +78064,7 @@ in sources."prelude-ls-1.2.1" sources."progress-2.0.3" sources."punycode-2.1.1" - sources."regexpp-3.1.0" + sources."regexpp-3.2.0" sources."require-from-string-2.0.2" sources."resolve-from-4.0.0" sources."rimraf-3.0.2" @@ -78081,13 +78085,13 @@ in sources."supports-color-5.5.0" (sources."table-6.7.1" // { dependencies = [ - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."json-schema-traverse-1.0.0" ]; }) sources."text-table-0.2.0" sources."type-check-0.4.0" - sources."type-fest-0.8.1" + sources."type-fest-0.20.2" sources."uri-js-4.4.1" sources."v8-compile-cache-2.3.0" sources."which-2.0.2" @@ -78115,8 +78119,8 @@ in }; dependencies = [ sources."@babel/code-frame-7.12.11" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" sources."escape-string-regexp-1.0.5" @@ -78124,11 +78128,7 @@ in sources."supports-color-5.5.0" ]; }) - (sources."@eslint/eslintrc-0.4.1" // { - dependencies = [ - sources."globals-12.4.0" - ]; - }) + sources."@eslint/eslintrc-0.4.2" sources."acorn-7.4.1" sources."acorn-jsx-5.3.1" sources."ajv-6.12.6" @@ -78159,7 +78159,7 @@ in sources."emoji-regex-8.0.0" sources."enquirer-2.3.6" sources."escape-string-regexp-4.0.0" - sources."eslint-7.27.0" + sources."eslint-7.29.0" sources."eslint-scope-5.1.1" (sources."eslint-utils-2.1.0" // { dependencies = [ @@ -78195,11 +78195,7 @@ in sources."functional-red-black-tree-1.0.1" sources."glob-7.1.7" sources."glob-parent-5.1.2" - (sources."globals-13.9.0" // { - dependencies = [ - sources."type-fest-0.20.2" - ]; - }) + sources."globals-13.9.0" sources."has-flag-4.0.0" sources."ignore-4.0.6" sources."import-fresh-3.3.0" @@ -78231,7 +78227,7 @@ in sources."prelude-ls-1.2.1" sources."progress-2.0.3" sources."punycode-2.1.1" - sources."regexpp-3.1.0" + sources."regexpp-3.2.0" sources."require-from-string-2.0.2" sources."resolve-from-4.0.0" sources."rimraf-3.0.2" @@ -78252,13 +78248,13 @@ in sources."supports-color-8.1.1" (sources."table-6.7.1" // { dependencies = [ - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."json-schema-traverse-1.0.0" ]; }) sources."text-table-0.2.0" sources."type-check-0.4.0" - sources."type-fest-0.8.1" + sources."type-fest-0.20.2" sources."uri-js-4.4.1" sources."v8-compile-cache-2.3.0" sources."which-2.0.2" @@ -78296,132 +78292,132 @@ in expo-cli = nodeEnv.buildNodePackage { name = "expo-cli"; packageName = "expo-cli"; - version = "4.5.2"; + version = "4.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/expo-cli/-/expo-cli-4.5.2.tgz"; - sha512 = "r6SeIMk2ZP1/rSKGcXquiQp/A7MGAmJvG0otmJhlO5ypdYXfAJ1fhEJIqt7ufSngc5RRJ0cjnKZ1WBSyJlJTNA=="; + url = "https://registry.npmjs.org/expo-cli/-/expo-cli-4.6.0.tgz"; + sha512 = "hvsfWKLsPG8oUMTEAVcGxp3JR/28H2KkZP2TW6iXqCv4EXwOYydnr1WjnYLZgN+wDRtoyGhYn7GFra5tXZJhrA=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" (sources."@babel/core-7.9.0" // { dependencies = [ sources."semver-5.7.1" ]; }) - sources."@babel/generator-7.14.3" - sources."@babel/helper-annotate-as-pure-7.12.13" - sources."@babel/helper-builder-binary-assignment-operator-visitor-7.12.13" - (sources."@babel/helper-compilation-targets-7.14.4" // { + sources."@babel/generator-7.14.5" + sources."@babel/helper-annotate-as-pure-7.14.5" + sources."@babel/helper-builder-binary-assignment-operator-visitor-7.14.5" + (sources."@babel/helper-compilation-targets-7.14.5" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/helper-create-class-features-plugin-7.14.4" - sources."@babel/helper-create-regexp-features-plugin-7.14.3" + sources."@babel/helper-create-class-features-plugin-7.14.6" + sources."@babel/helper-create-regexp-features-plugin-7.14.5" (sources."@babel/helper-define-polyfill-provider-0.2.3" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/helper-explode-assignable-expression-7.13.0" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-hoist-variables-7.13.16" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-plugin-utils-7.13.0" - sources."@babel/helper-remap-async-to-generator-7.13.0" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-skip-transparent-expression-wrappers-7.12.1" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helper-wrap-function-7.13.0" - sources."@babel/helpers-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-explode-assignable-expression-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-plugin-utils-7.14.5" + sources."@babel/helper-remap-async-to-generator-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-skip-transparent-expression-wrappers-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helper-wrap-function-7.14.5" + sources."@babel/helpers-7.14.6" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" ]; }) - sources."@babel/parser-7.14.4" - sources."@babel/plugin-proposal-async-generator-functions-7.14.2" + sources."@babel/parser-7.14.7" + sources."@babel/plugin-proposal-async-generator-functions-7.14.7" sources."@babel/plugin-proposal-class-properties-7.12.13" - sources."@babel/plugin-proposal-dynamic-import-7.14.2" - sources."@babel/plugin-proposal-export-default-from-7.12.13" - sources."@babel/plugin-proposal-export-namespace-from-7.14.2" - sources."@babel/plugin-proposal-json-strings-7.14.2" - sources."@babel/plugin-proposal-logical-assignment-operators-7.14.2" - sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.2" - sources."@babel/plugin-proposal-numeric-separator-7.14.2" - sources."@babel/plugin-proposal-object-rest-spread-7.14.4" - sources."@babel/plugin-proposal-optional-catch-binding-7.14.2" - sources."@babel/plugin-proposal-optional-chaining-7.14.2" - sources."@babel/plugin-proposal-private-methods-7.13.0" - sources."@babel/plugin-proposal-unicode-property-regex-7.12.13" + sources."@babel/plugin-proposal-dynamic-import-7.14.5" + sources."@babel/plugin-proposal-export-default-from-7.14.5" + sources."@babel/plugin-proposal-export-namespace-from-7.14.5" + sources."@babel/plugin-proposal-json-strings-7.14.5" + sources."@babel/plugin-proposal-logical-assignment-operators-7.14.5" + sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.5" + sources."@babel/plugin-proposal-numeric-separator-7.14.5" + sources."@babel/plugin-proposal-object-rest-spread-7.14.7" + sources."@babel/plugin-proposal-optional-catch-binding-7.14.5" + sources."@babel/plugin-proposal-optional-chaining-7.14.5" + sources."@babel/plugin-proposal-private-methods-7.14.5" + sources."@babel/plugin-proposal-unicode-property-regex-7.14.5" sources."@babel/plugin-syntax-async-generators-7.8.4" sources."@babel/plugin-syntax-class-properties-7.12.13" sources."@babel/plugin-syntax-dynamic-import-7.8.3" - sources."@babel/plugin-syntax-export-default-from-7.12.13" + sources."@babel/plugin-syntax-export-default-from-7.14.5" sources."@babel/plugin-syntax-export-namespace-from-7.8.3" - sources."@babel/plugin-syntax-flow-7.12.13" + sources."@babel/plugin-syntax-flow-7.14.5" sources."@babel/plugin-syntax-json-strings-7.8.3" - sources."@babel/plugin-syntax-jsx-7.12.13" + sources."@babel/plugin-syntax-jsx-7.14.5" sources."@babel/plugin-syntax-logical-assignment-operators-7.10.4" sources."@babel/plugin-syntax-nullish-coalescing-operator-7.8.3" sources."@babel/plugin-syntax-numeric-separator-7.10.4" sources."@babel/plugin-syntax-object-rest-spread-7.8.3" sources."@babel/plugin-syntax-optional-catch-binding-7.8.3" sources."@babel/plugin-syntax-optional-chaining-7.8.3" - sources."@babel/plugin-syntax-top-level-await-7.12.13" - sources."@babel/plugin-syntax-typescript-7.12.13" - sources."@babel/plugin-transform-arrow-functions-7.13.0" - sources."@babel/plugin-transform-async-to-generator-7.13.0" - sources."@babel/plugin-transform-block-scoped-functions-7.12.13" - sources."@babel/plugin-transform-block-scoping-7.14.4" - sources."@babel/plugin-transform-classes-7.14.4" - sources."@babel/plugin-transform-computed-properties-7.13.0" - sources."@babel/plugin-transform-destructuring-7.14.4" - sources."@babel/plugin-transform-dotall-regex-7.12.13" - sources."@babel/plugin-transform-duplicate-keys-7.12.13" - sources."@babel/plugin-transform-exponentiation-operator-7.12.13" - sources."@babel/plugin-transform-flow-strip-types-7.13.0" - sources."@babel/plugin-transform-for-of-7.13.0" - sources."@babel/plugin-transform-function-name-7.12.13" - sources."@babel/plugin-transform-literals-7.12.13" - sources."@babel/plugin-transform-member-expression-literals-7.12.13" - sources."@babel/plugin-transform-modules-amd-7.14.2" - sources."@babel/plugin-transform-modules-commonjs-7.14.0" - sources."@babel/plugin-transform-modules-systemjs-7.13.8" - sources."@babel/plugin-transform-modules-umd-7.14.0" - sources."@babel/plugin-transform-named-capturing-groups-regex-7.12.13" - sources."@babel/plugin-transform-new-target-7.12.13" - sources."@babel/plugin-transform-object-assign-7.12.13" - sources."@babel/plugin-transform-object-super-7.12.13" - sources."@babel/plugin-transform-parameters-7.14.2" - sources."@babel/plugin-transform-property-literals-7.12.13" - sources."@babel/plugin-transform-react-display-name-7.14.2" - sources."@babel/plugin-transform-react-jsx-7.14.3" - sources."@babel/plugin-transform-react-jsx-self-7.12.13" - sources."@babel/plugin-transform-react-jsx-source-7.14.2" - sources."@babel/plugin-transform-regenerator-7.13.15" - sources."@babel/plugin-transform-reserved-words-7.12.13" - (sources."@babel/plugin-transform-runtime-7.14.3" // { + sources."@babel/plugin-syntax-top-level-await-7.14.5" + sources."@babel/plugin-syntax-typescript-7.14.5" + sources."@babel/plugin-transform-arrow-functions-7.14.5" + sources."@babel/plugin-transform-async-to-generator-7.14.5" + sources."@babel/plugin-transform-block-scoped-functions-7.14.5" + sources."@babel/plugin-transform-block-scoping-7.14.5" + sources."@babel/plugin-transform-classes-7.14.5" + sources."@babel/plugin-transform-computed-properties-7.14.5" + sources."@babel/plugin-transform-destructuring-7.14.7" + sources."@babel/plugin-transform-dotall-regex-7.14.5" + sources."@babel/plugin-transform-duplicate-keys-7.14.5" + sources."@babel/plugin-transform-exponentiation-operator-7.14.5" + sources."@babel/plugin-transform-flow-strip-types-7.14.5" + sources."@babel/plugin-transform-for-of-7.14.5" + sources."@babel/plugin-transform-function-name-7.14.5" + sources."@babel/plugin-transform-literals-7.14.5" + sources."@babel/plugin-transform-member-expression-literals-7.14.5" + sources."@babel/plugin-transform-modules-amd-7.14.5" + sources."@babel/plugin-transform-modules-commonjs-7.14.5" + sources."@babel/plugin-transform-modules-systemjs-7.14.5" + sources."@babel/plugin-transform-modules-umd-7.14.5" + sources."@babel/plugin-transform-named-capturing-groups-regex-7.14.7" + sources."@babel/plugin-transform-new-target-7.14.5" + sources."@babel/plugin-transform-object-assign-7.14.5" + sources."@babel/plugin-transform-object-super-7.14.5" + sources."@babel/plugin-transform-parameters-7.14.5" + sources."@babel/plugin-transform-property-literals-7.14.5" + sources."@babel/plugin-transform-react-display-name-7.14.5" + sources."@babel/plugin-transform-react-jsx-7.14.5" + sources."@babel/plugin-transform-react-jsx-self-7.14.5" + sources."@babel/plugin-transform-react-jsx-source-7.14.5" + sources."@babel/plugin-transform-regenerator-7.14.5" + sources."@babel/plugin-transform-reserved-words-7.14.5" + (sources."@babel/plugin-transform-runtime-7.14.5" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/plugin-transform-shorthand-properties-7.12.13" - sources."@babel/plugin-transform-spread-7.13.0" - sources."@babel/plugin-transform-sticky-regex-7.12.13" - sources."@babel/plugin-transform-template-literals-7.13.0" - sources."@babel/plugin-transform-typeof-symbol-7.12.13" - sources."@babel/plugin-transform-typescript-7.14.4" - sources."@babel/plugin-transform-unicode-escapes-7.12.13" - sources."@babel/plugin-transform-unicode-regex-7.12.13" + sources."@babel/plugin-transform-shorthand-properties-7.14.5" + sources."@babel/plugin-transform-spread-7.14.6" + sources."@babel/plugin-transform-sticky-regex-7.14.5" + sources."@babel/plugin-transform-template-literals-7.14.5" + sources."@babel/plugin-transform-typeof-symbol-7.14.5" + sources."@babel/plugin-transform-typescript-7.14.6" + sources."@babel/plugin-transform-unicode-escapes-7.14.5" + sources."@babel/plugin-transform-unicode-regex-7.14.5" (sources."@babel/preset-env-7.12.17" // { dependencies = [ sources."semver-5.7.1" @@ -78429,14 +78425,14 @@ in }) sources."@babel/preset-modules-0.1.4" sources."@babel/preset-typescript-7.12.17" - sources."@babel/runtime-7.14.0" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/runtime-7.14.6" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" sources."@expo/apple-utils-0.0.0-alpha.20" sources."@expo/bunyan-4.0.0" - sources."@expo/config-4.0.2" - sources."@expo/config-plugins-2.0.2" + sources."@expo/config-4.0.4" + sources."@expo/config-plugins-2.0.4" sources."@expo/config-types-41.0.0" (sources."@expo/configure-splash-screen-0.4.0" // { dependencies = [ @@ -78444,7 +78440,7 @@ in sources."pngjs-5.0.0" ]; }) - (sources."@expo/dev-server-0.1.72" // { + (sources."@expo/dev-server-0.1.74" // { dependencies = [ sources."body-parser-1.19.0" sources."bytes-3.1.0" @@ -78453,7 +78449,7 @@ in sources."iconv-lite-0.4.24" sources."inherits-2.0.3" sources."ms-2.0.0" - sources."open-8.2.0" + sources."open-8.2.1" sources."qs-6.7.0" sources."raw-body-2.4.0" sources."setprototypeof-1.1.1" @@ -78461,7 +78457,7 @@ in sources."temp-dir-2.0.0" ]; }) - sources."@expo/dev-tools-0.13.102" + sources."@expo/dev-tools-0.13.104" (sources."@expo/devcert-1.0.0" // { dependencies = [ sources."debug-3.2.7" @@ -78481,7 +78477,7 @@ in sources."json5-1.0.1" ]; }) - sources."@expo/metro-config-0.1.72" + sources."@expo/metro-config-0.1.74" sources."@expo/osascript-2.0.28" (sources."@expo/package-manager-0.0.43" // { dependencies = [ @@ -78495,7 +78491,7 @@ in sources."xmlbuilder-14.0.0" ]; }) - sources."@expo/prebuild-config-1.0.3" + sources."@expo/prebuild-config-1.0.5" sources."@expo/results-1.0.0" (sources."@expo/schemer-1.3.29" // { dependencies = [ @@ -78506,15 +78502,16 @@ in }) sources."@expo/simple-spinner-1.0.2" sources."@expo/spawn-async-1.5.0" - (sources."@expo/webpack-config-0.12.76" // { + (sources."@expo/webpack-config-0.12.78" // { dependencies = [ sources."@babel/runtime-7.9.0" sources."react-refresh-0.8.3" ]; }) - (sources."@expo/xcpretty-2.0.1" // { + (sources."@expo/xcpretty-3.1.3" // { dependencies = [ sources."@babel/code-frame-7.10.4" + sources."js-yaml-4.1.0" ]; }) sources."@hapi/address-4.1.0" @@ -78564,10 +78561,10 @@ in sources."@jimp/tiff-0.12.1" sources."@jimp/types-0.12.1" sources."@jimp/utils-0.12.1" - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" - (sources."@npmcli/git-2.0.9" // { + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" + (sources."@npmcli/git-2.1.0" // { dependencies = [ sources."mkdirp-1.0.4" sources."semver-7.3.5" @@ -78704,7 +78701,7 @@ in sources."application-config-path-0.1.0" sources."aproba-1.2.0" sources."are-we-there-yet-1.1.5" - sources."argparse-1.0.10" + sources."argparse-2.0.1" sources."arr-diff-4.0.0" sources."arr-flatten-1.1.0" sources."arr-union-3.1.0" @@ -78753,7 +78750,7 @@ in sources."semver-6.3.0" ]; }) - sources."babel-plugin-polyfill-corejs3-0.2.2" + sources."babel-plugin-polyfill-corejs3-0.2.3" sources."babel-plugin-polyfill-regenerator-0.2.2" sources."babel-plugin-syntax-object-rest-spread-6.13.0" sources."babel-plugin-syntax-trailing-function-commas-7.0.0-beta.0" @@ -78836,7 +78833,7 @@ in }) sources."cache-base-1.0.1" sources."cacheable-lookup-5.0.4" - sources."cacheable-request-7.0.1" + sources."cacheable-request-7.0.2" sources."call-bind-1.0.2" sources."caller-callsite-2.0.0" sources."caller-path-2.0.0" @@ -78844,12 +78841,12 @@ in sources."callsites-2.0.0" (sources."camel-case-4.1.2" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."camelcase-5.3.1" sources."caniuse-api-3.0.0" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."caseless-0.12.0" (sources."chalk-4.1.1" // { dependencies = [ @@ -78861,7 +78858,7 @@ in ]; }) sources."charenc-0.0.2" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."chownr-2.0.0" sources."chrome-trace-event-1.0.3" sources."ci-info-3.2.0" @@ -78958,7 +78955,7 @@ in sources."constants-browserify-1.0.0" sources."content-disposition-0.5.2" sources."content-type-1.0.4" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."cookie-0.3.1" sources."cookie-signature-1.0.6" (sources."copy-concurrently-1.0.5" // { @@ -78983,7 +78980,7 @@ in ]; }) sources."core-js-2.6.12" - (sources."core-js-compat-3.13.1" // { + (sources."core-js-compat-3.15.1" // { dependencies = [ sources."semver-7.0.0" ]; @@ -79014,15 +79011,9 @@ in sources."semver-6.3.0" ]; }) - (sources."css-select-2.1.0" // { + (sources."css-select-4.1.3" // { dependencies = [ - (sources."dom-serializer-0.2.2" // { - dependencies = [ - sources."domelementtype-2.2.0" - ]; - }) - sources."domelementtype-1.3.1" - sources."domutils-1.7.0" + sources."domhandler-4.2.0" ]; }) sources."css-select-base-adapter-0.1.1" @@ -79031,7 +79022,7 @@ in sources."source-map-0.6.1" ]; }) - sources."css-what-3.4.2" + sources."css-what-5.0.1" sources."cssesc-3.0.0" sources."cssnano-4.1.11" sources."cssnano-preset-default-4.0.8" @@ -79107,14 +79098,14 @@ in sources."domelementtype-2.2.0" sources."domhandler-3.3.0" sources."domino-2.1.6" - (sources."domutils-2.6.0" // { + (sources."domutils-2.7.0" // { dependencies = [ sources."domhandler-4.2.0" ]; }) (sources."dot-case-3.0.4" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."dot-prop-5.3.0" @@ -79123,7 +79114,7 @@ in sources."duplexify-3.7.1" sources."ecc-jsbn-0.1.2" sources."ee-first-1.1.1" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" (sources."elliptic-6.5.4" // { dependencies = [ sources."bn.js-4.12.0" @@ -79204,7 +79195,7 @@ in sources."ms-2.0.0" ]; }) - (sources."expo-pwa-0.0.82" // { + (sources."expo-pwa-0.0.84" // { dependencies = [ sources."commander-2.20.0" ]; @@ -79487,6 +79478,7 @@ in sources."json-buffer-3.0.0" sources."keyv-3.1.0" sources."lowercase-keys-1.0.1" + sources."normalize-url-4.5.1" sources."p-cancelable-1.1.0" sources."p-timeout-3.2.0" sources."responselike-1.0.2" @@ -79521,7 +79513,11 @@ in sources."join-component-1.1.0" sources."jpeg-js-0.4.3" sources."js-tokens-4.0.0" - sources."js-yaml-3.14.1" + (sources."js-yaml-3.14.1" // { + dependencies = [ + sources."argparse-1.0.10" + ]; + }) sources."jsbn-0.1.1" sources."jsesc-2.5.2" sources."json-buffer-3.0.1" @@ -79578,7 +79574,7 @@ in sources."loose-envify-1.4.0" (sources."lower-case-2.0.2" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."lowercase-keys-2.0.0" @@ -79588,7 +79584,7 @@ in sources."semver-5.7.1" ]; }) - (sources."make-fetch-happen-8.0.14" // { + (sources."make-fetch-happen-9.0.3" // { dependencies = [ sources."minipass-3.1.3" ]; @@ -79620,8 +79616,8 @@ in ]; }) sources."mime-1.4.1" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."mimic-response-1.0.1" sources."min-document-2.19.0" @@ -79708,7 +79704,7 @@ in sources."nice-try-1.0.5" (sources."no-case-3.0.4" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."node-fetch-2.6.1" @@ -79726,10 +79722,10 @@ in sources."punycode-1.4.1" ]; }) - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" sources."nopt-5.0.0" sources."normalize-path-3.0.0" - sources."normalize-url-4.5.1" + sources."normalize-url-6.1.0" sources."npm-bundled-1.1.2" sources."npm-install-checks-4.0.0" sources."npm-normalize-package-bin-1.0.1" @@ -79743,22 +79739,21 @@ in (sources."npm-pick-manifest-6.1.1" // { dependencies = [ sources."hosted-git-info-4.0.2" - sources."npm-package-arg-8.1.2" + sources."npm-package-arg-8.1.5" sources."semver-7.3.5" ]; }) - (sources."npm-registry-fetch-10.1.2" // { + (sources."npm-registry-fetch-11.0.0" // { dependencies = [ sources."hosted-git-info-4.0.2" sources."minipass-3.1.3" - sources."npm-package-arg-8.1.2" + sources."npm-package-arg-8.1.5" sources."semver-7.3.5" ]; }) sources."npm-run-path-2.0.2" sources."npmlog-4.1.2" - sources."nth-check-1.0.2" - sources."nullthrows-1.1.1" + sources."nth-check-2.0.0" sources."number-is-nan-1.0.1" sources."oauth-sign-0.9.0" sources."ob1-0.59.0" @@ -79797,7 +79792,7 @@ in sources."is-wsl-1.1.0" ]; }) - sources."optimize-css-assets-webpack-plugin-5.0.6" + sources."optimize-css-assets-webpack-plugin-5.0.8" sources."options-0.0.6" (sources."ora-3.4.0" // { dependencies = [ @@ -79838,6 +79833,7 @@ in sources."json-buffer-3.0.0" sources."keyv-3.1.0" sources."lowercase-keys-1.0.1" + sources."normalize-url-4.5.1" sources."p-cancelable-1.1.0" sources."registry-auth-token-3.4.0" sources."registry-url-5.1.0" @@ -79845,12 +79841,12 @@ in sources."semver-6.3.0" ]; }) - (sources."pacote-11.3.3" // { + (sources."pacote-11.3.4" // { dependencies = [ sources."hosted-git-info-4.0.2" sources."minipass-3.1.3" sources."mkdirp-1.0.4" - sources."npm-package-arg-8.1.2" + sources."npm-package-arg-8.1.5" sources."rimraf-3.0.2" sources."semver-7.3.5" ]; @@ -79859,7 +79855,7 @@ in sources."parallel-transform-1.2.0" (sources."param-case-3.0.4" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."parse-asn1-5.1.6" @@ -79873,7 +79869,7 @@ in sources."parseurl-1.3.3" (sources."pascal-case-3.1.2" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."pascalcase-0.1.1" @@ -79927,7 +79923,7 @@ in ]; }) sources."posix-character-classes-0.1.1" - (sources."postcss-7.0.35" // { + (sources."postcss-7.0.36" // { dependencies = [ (sources."chalk-2.4.2" // { dependencies = [ @@ -80129,7 +80125,7 @@ in sources."read-last-lines-1.6.0" sources."read-package-json-fast-2.0.2" sources."readable-stream-2.3.7" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."recursive-readdir-2.2.2" sources."regenerate-1.4.2" sources."regenerate-unicode-properties-8.2.0" @@ -80149,21 +80145,11 @@ in sources."relateurl-0.2.7" sources."remove-trailing-separator-1.1.0" sources."remove-trailing-slash-0.1.1" - (sources."renderkid-2.0.5" // { + (sources."renderkid-2.0.7" // { dependencies = [ sources."ansi-regex-2.1.1" - (sources."dom-serializer-0.2.2" // { - dependencies = [ - sources."domelementtype-2.2.0" - sources."entities-2.2.0" - ]; - }) - sources."domelementtype-1.3.1" - sources."domhandler-2.4.2" - sources."domutils-1.7.0" - sources."entities-1.1.2" - sources."htmlparser2-3.10.1" - sources."readable-stream-3.6.0" + sources."domhandler-4.2.0" + sources."htmlparser2-6.1.0" sources."strip-ansi-3.0.1" ]; }) @@ -80303,7 +80289,7 @@ in ]; }) sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."source-list-map-2.0.1" sources."source-map-0.5.7" sources."source-map-resolve-0.5.3" @@ -80393,6 +80379,16 @@ in (sources."svgo-1.3.2" // { dependencies = [ sources."chalk-2.4.2" + sources."css-select-2.1.0" + sources."css-what-3.4.2" + (sources."dom-serializer-0.2.2" // { + dependencies = [ + sources."domelementtype-2.2.0" + ]; + }) + sources."domelementtype-1.3.1" + sources."domutils-1.7.0" + sources."nth-check-1.0.2" ]; }) sources."symbol-observable-1.2.0" @@ -80662,7 +80658,7 @@ in sources."strip-ansi-3.0.1" sources."supports-color-6.1.0" sources."to-regex-range-2.1.1" - sources."ws-6.2.1" + sources."ws-6.2.2" ]; }) (sources."webpack-log-2.0.0" // { @@ -80751,7 +80747,7 @@ in sources."uuid-7.0.3" ]; }) - (sources."xdl-59.0.42" // { + (sources."xdl-59.0.44" // { dependencies = [ sources."chownr-1.1.4" sources."fs-minipass-1.2.7" @@ -80900,8 +80896,8 @@ in sources."loud-rejection-1.6.0" sources."map-obj-1.0.1" sources."meow-3.7.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."minimist-1.2.5" sources."mkdirp-0.5.5" @@ -80997,17 +80993,18 @@ in sha512 = "KqaoGSmcIBLY6Vr1wWRMu0acuLUpxpKEtjekdwYs+JxMk74vRa8Mwxd96SmEoBat28cPCoLAPfvDyEtzUzkjEg=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/generator-7.14.3" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/highlight-7.14.0" - sources."@babel/parser-7.14.4" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/code-frame-7.14.5" + sources."@babel/generator-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/highlight-7.14.5" + sources."@babel/parser-7.14.7" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" (sources."@heroku-cli/color-1.1.14" // { dependencies = [ sources."ansi-regex-4.1.0" @@ -81018,9 +81015,9 @@ in ]; }) sources."@mrmlnc/readdir-enhanced-2.2.1" - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" (sources."@oclif/command-1.8.0" // { dependencies = [ sources."@oclif/plugin-help-3.2.2" @@ -81039,8 +81036,8 @@ in }) (sources."@oclif/config-1.17.0" // { dependencies = [ - sources."globby-11.0.3" - sources."tslib-2.2.0" + sources."globby-11.0.4" + sources."tslib-2.3.0" ]; }) sources."@oclif/errors-1.3.4" @@ -81387,8 +81384,8 @@ in sources."map-visit-1.0.0" sources."merge2-1.4.1" sources."micromatch-4.0.4" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" (sources."mixin-deep-1.3.2" // { @@ -81445,7 +81442,7 @@ in sources."posix-character-classes-0.1.1" sources."prelude-ls-1.1.2" sources."prepend-http-2.0.0" - sources."prettier-2.3.0" + sources."prettier-2.3.1" sources."prettier-linter-helpers-1.0.0" sources."process-nextick-args-2.0.1" sources."psl-1.8.0" @@ -81609,24 +81606,28 @@ in firebase-tools = nodeEnv.buildNodePackage { name = "firebase-tools"; packageName = "firebase-tools"; - version = "9.12.0"; + version = "9.14.0"; src = fetchurl { - url = "https://registry.npmjs.org/firebase-tools/-/firebase-tools-9.12.0.tgz"; - sha512 = "rPk4JyzPaSHyHQDGCh0/U63MW2nXgnZ4h0IRE2EjFHRz+KyNl/hakGX7EQKVej5HpMKFhWRjGOvDHn1PXooQgw=="; + url = "https://registry.npmjs.org/firebase-tools/-/firebase-tools-9.14.0.tgz"; + sha512 = "CHR1Xw5LJ+hDQ/SaRqvuNXJEmpbPsOEtNRj6oD44VFGRp9ZTjY3irilSj6uv7S2P1A1XLEGyO7jEpCH5mkc9RQ=="; }; dependencies = [ - sources."@apidevtools/json-schema-ref-parser-9.0.7" + (sources."@apidevtools/json-schema-ref-parser-9.0.9" // { + dependencies = [ + sources."js-yaml-4.1.0" + ]; + }) sources."@dabh/diagnostics-2.0.2" sources."@google-cloud/paginator-3.0.5" sources."@google-cloud/precise-date-2.0.3" - sources."@google-cloud/projectify-2.0.1" + sources."@google-cloud/projectify-2.1.0" sources."@google-cloud/promisify-2.0.3" - (sources."@google-cloud/pubsub-2.12.0" // { + (sources."@google-cloud/pubsub-2.14.0" // { dependencies = [ - sources."google-auth-library-7.1.0" + sources."google-auth-library-7.1.2" ]; }) - sources."@grpc/grpc-js-1.3.2" + sources."@grpc/grpc-js-1.3.3" sources."@grpc/proto-loader-0.6.2" sources."@jsdevtools/ono-7.1.3" (sources."@npmcli/move-file-1.1.2" // { @@ -81634,8 +81635,8 @@ in sources."mkdirp-1.0.4" ]; }) - sources."@opentelemetry/api-0.18.1" - sources."@opentelemetry/semantic-conventions-0.18.2" + sources."@opentelemetry/api-0.20.0" + sources."@opentelemetry/semantic-conventions-0.20.0" sources."@protobufjs/aspromise-1.1.2" sources."@protobufjs/base64-1.1.2" sources."@protobufjs/codegen-2.0.4" @@ -81652,9 +81653,10 @@ in sources."@types/archiver-5.1.0" sources."@types/duplexify-3.6.0" sources."@types/glob-7.1.3" + sources."@types/json-schema-7.0.7" sources."@types/long-4.0.1" sources."@types/minimatch-3.0.4" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."JSONStream-1.3.5" sources."abbrev-1.1.1" sources."abort-controller-3.0.0" @@ -81697,7 +81699,7 @@ in sources."string_decoder-1.1.1" ]; }) - sources."argparse-1.0.10" + sources."argparse-2.0.1" sources."array-flatten-1.1.1" sources."arrify-2.0.1" sources."as-array-2.0.0" @@ -81722,7 +81724,7 @@ in sources."binary-0.3.0" sources."binary-extensions-2.2.0" sources."bl-4.1.0" - sources."blakejs-1.1.0" + sources."blakejs-1.1.1" sources."bluebird-3.4.7" (sources."body-parser-1.19.0" // { dependencies = [ @@ -81770,7 +81772,7 @@ in ]; }) sources."chardet-0.7.0" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."chownr-2.0.0" sources."ci-info-2.0.0" sources."cjson-0.3.3" @@ -81991,7 +81993,7 @@ in ]; }) sources."gaxios-4.3.0" - sources."gcp-metadata-4.2.1" + sources."gcp-metadata-4.3.0" sources."get-caller-file-2.0.5" sources."get-stream-4.1.0" (sources."get-uri-3.0.2" // { @@ -82006,15 +82008,15 @@ in sources."glob-slasher-1.0.1" sources."global-dirs-2.1.0" sources."google-auth-library-6.1.6" - (sources."google-gax-2.14.1" // { + (sources."google-gax-2.16.0" // { dependencies = [ - sources."google-auth-library-7.1.0" + sources."google-auth-library-7.1.2" ]; }) - sources."google-p12-pem-3.0.3" + sources."google-p12-pem-3.1.0" sources."got-9.6.0" sources."graceful-fs-4.2.6" - sources."gtoken-5.2.1" + sources."gtoken-5.3.0" sources."har-schema-2.0.0" sources."har-validator-5.1.5" (sources."has-ansi-2.0.0" // { @@ -82090,7 +82092,11 @@ in sources."isstream-0.1.2" sources."jju-1.4.0" sources."join-path-1.1.1" - sources."js-yaml-3.14.1" + (sources."js-yaml-3.14.1" // { + dependencies = [ + sources."argparse-1.0.10" + ]; + }) sources."jsbn-0.1.1" sources."json-bigint-1.0.0" sources."json-buffer-3.0.0" @@ -82172,8 +82178,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-2.5.2" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -82289,7 +82295,7 @@ in sources."re2-1.16.0" sources."readable-stream-3.6.0" sources."readdir-glob-1.1.1" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."redeyed-2.1.1" sources."registry-auth-token-4.2.1" sources."registry-url-5.1.0" @@ -82348,7 +82354,7 @@ in sources."simple-swizzle-0.2.2" sources."smart-buffer-4.1.0" sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."source-map-0.6.1" sources."sprintf-js-1.0.3" sources."sshpk-1.16.1" @@ -82426,7 +82432,7 @@ in sources."toxic-1.0.1" sources."traverse-0.3.9" sources."triple-beam-1.3.0" - sources."tslib-2.2.0" + sources."tslib-2.3.0" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" (sources."tweetsodium-0.0.5" // { @@ -82499,7 +82505,7 @@ in sources."wrap-ansi-7.0.0" sources."wrappy-1.0.2" sources."write-file-atomic-3.0.3" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xdg-basedir-4.0.0" sources."xregexp-2.0.0" sources."xtend-4.0.2" @@ -82507,7 +82513,7 @@ in sources."yallist-4.0.0" sources."yaml-1.10.2" sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" sources."zip-stream-4.1.0" ]; buildInputs = globalBuildInputs; @@ -82557,7 +82563,7 @@ in sources."wrappy-1.0.2" sources."y18n-5.0.8" sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -82578,9 +82584,9 @@ in sha512 = "untVuHgEQjwTXQGiWcwMTi0Uks6ht9R5hb1mDT4AEQitZ/z8UrhvseQsGEC3kVEjfxQ6bdmCMaA/hKTZ5aQDrA=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."ansi-styles-3.2.1" sources."chalk-2.4.2" @@ -82620,7 +82626,7 @@ in sources."error-ex-1.3.2" sources."esc-exit-2.0.2" sources."escape-string-regexp-1.0.5" - sources."execa-5.0.1" + sources."execa-5.1.1" sources."external-editor-3.1.0" sources."figures-3.2.0" sources."find-up-4.1.0" @@ -82635,7 +82641,7 @@ in sources."iconv-lite-0.4.24" sources."indent-string-4.0.0" sources."inquirer-7.3.3" - sources."inquirer-autocomplete-prompt-1.3.0" + sources."inquirer-autocomplete-prompt-1.4.0" sources."is-arrayish-0.2.1" sources."is-core-module-2.4.0" sources."is-fullwidth-code-point-3.0.0" @@ -82736,7 +82742,7 @@ in sources."which-2.0.2" sources."wrappy-1.0.2" sources."yallist-4.0.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -82759,7 +82765,7 @@ in dependencies = [ sources."@types/atob-2.1.2" sources."@types/inquirer-6.5.0" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/through-0.0.30" sources."ajv-6.12.6" sources."ansi-escapes-4.3.2" @@ -82806,7 +82812,7 @@ in sources."escape-string-regexp-1.0.5" sources."esprima-4.0.1" sources."eth-lib-0.2.8" - sources."ethereum-bloom-filters-1.0.9" + sources."ethereum-bloom-filters-1.0.10" (sources."ethjs-unit-0.1.6" // { dependencies = [ sources."bn.js-4.11.6" @@ -82857,8 +82863,8 @@ in sources."localforage-1.9.0" sources."locate-path-5.0.0" sources."lodash-4.17.21" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."mimic-response-1.0.1" sources."min-document-2.19.0" @@ -82979,10 +82985,10 @@ in forever = nodeEnv.buildNodePackage { name = "forever"; packageName = "forever"; - version = "4.0.0"; + version = "4.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/forever/-/forever-4.0.0.tgz"; - sha512 = "8cFfO0lvIs4c0P5LvKbdvZvtOK/z79AF/vC9DQLH+niyOCPxqq1+12CyYrzHC+5hBILjPU9ClWLVrXvrK+2ZVw=="; + url = "https://registry.npmjs.org/forever/-/forever-4.0.1.tgz"; + sha512 = "NRY5hvmjqfsWXpdGZONsfQg0GpzTHOP3xWTnOc1U3bY92m6TJr2mWDsXzv+3bMk2LftSne72keaMcX891JL2pQ=="; }; dependencies = [ (sources."anymatch-2.0.0" // { @@ -83071,7 +83077,7 @@ in sources."es-get-iterator-1.1.2" sources."es-to-primitive-1.2.1" sources."event-stream-3.3.4" - sources."eventemitter2-6.4.3" + sources."eventemitter2-6.4.4" (sources."expand-brackets-2.1.4" // { dependencies = [ sources."define-property-0.2.5" @@ -83446,10 +83452,10 @@ in gatsby-cli = nodeEnv.buildNodePackage { name = "gatsby-cli"; packageName = "gatsby-cli"; - version = "3.6.0"; + version = "3.8.0"; src = fetchurl { - url = "https://registry.npmjs.org/gatsby-cli/-/gatsby-cli-3.6.0.tgz"; - sha512 = "GJ0BviJw3qnONdoNpCvqgRA8jxYk7rpqi+7MrvT0U+YMcT2HGhZbhY0RxlZqYRL8qOCJTtLB/N4Z7cCUwi8g1w=="; + url = "https://registry.npmjs.org/gatsby-cli/-/gatsby-cli-3.8.0.tgz"; + sha512 = "81rQNDgHgkXoFMiwluZGN0ETKonGn8tl1uxL3OpOx3aOfP1aPv5NBSOLX70O6vo9jXyg6oy0gPHGjhbQMdSyIw=="; }; dependencies = [ (sources."@ardatan/aggregate-error-0.0.6" // { @@ -83457,57 +83463,58 @@ in sources."tslib-2.0.3" ]; }) - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" - (sources."@babel/core-7.14.3" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" + (sources."@babel/core-7.14.6" // { dependencies = [ sources."semver-6.3.0" sources."source-map-0.5.7" ]; }) - (sources."@babel/generator-7.14.3" // { + (sources."@babel/generator-7.14.5" // { dependencies = [ sources."source-map-0.5.7" ]; }) - sources."@babel/helper-annotate-as-pure-7.12.13" - (sources."@babel/helper-compilation-targets-7.14.4" // { + sources."@babel/helper-annotate-as-pure-7.14.5" + (sources."@babel/helper-compilation-targets-7.14.5" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-plugin-utils-7.13.0" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-skip-transparent-expression-wrappers-7.12.1" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helpers-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-plugin-utils-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-skip-transparent-expression-wrappers-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helpers-7.14.6" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" ]; }) - sources."@babel/parser-7.14.4" + sources."@babel/parser-7.14.7" sources."@babel/plugin-proposal-object-rest-spread-7.10.4" - sources."@babel/plugin-proposal-optional-chaining-7.14.2" - sources."@babel/plugin-syntax-jsx-7.12.13" + sources."@babel/plugin-proposal-optional-chaining-7.14.5" + sources."@babel/plugin-syntax-jsx-7.14.5" sources."@babel/plugin-syntax-object-rest-spread-7.8.3" sources."@babel/plugin-syntax-optional-chaining-7.8.3" - sources."@babel/plugin-transform-parameters-7.14.2" - sources."@babel/plugin-transform-react-jsx-7.14.3" - sources."@babel/runtime-7.14.0" - sources."@babel/standalone-7.14.4" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/plugin-transform-parameters-7.14.5" + sources."@babel/plugin-transform-react-jsx-7.14.5" + sources."@babel/runtime-7.14.6" + sources."@babel/standalone-7.14.7" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" sources."@graphql-tools/schema-7.1.5" sources."@graphql-tools/utils-7.10.0" sources."@hapi/address-2.1.4" @@ -83544,7 +83551,7 @@ in sources."@types/istanbul-lib-report-3.0.0" sources."@types/istanbul-reports-1.1.2" sources."@types/json-patch-0.0.30" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/node-fetch-2.5.10" sources."@types/readable-stream-2.3.10" sources."@types/unist-2.0.3" @@ -83552,7 +83559,7 @@ in sources."@types/yargs-parser-20.2.0" sources."@types/yoga-layout-1.9.2" sources."accepts-1.3.7" - sources."acorn-8.3.0" + sources."acorn-8.4.0" sources."acorn-jsx-5.3.1" sources."address-1.1.2" (sources."ansi-align-3.0.0" // { @@ -83612,7 +83619,7 @@ in sources."call-bind-1.0.2" sources."camel-case-4.1.2" sources."camelcase-5.3.1" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."ccount-1.1.0" (sources."chalk-4.1.1" // { dependencies = [ @@ -83628,7 +83635,7 @@ in sources."character-entities-legacy-1.1.4" sources."character-reference-invalid-1.1.4" sources."chardet-0.7.0" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."ci-info-2.0.0" sources."cli-boxes-2.2.1" sources."cli-cursor-3.1.0" @@ -83662,10 +83669,10 @@ in ]; }) sources."content-type-1.0.4" - sources."contentful-management-7.22.4" + sources."contentful-management-7.25.1" sources."contentful-sdk-core-6.8.0" sources."convert-hrtime-3.0.0" - (sources."convert-source-map-1.7.0" // { + (sources."convert-source-map-1.8.0" // { dependencies = [ sources."safe-buffer-5.1.2" ]; @@ -83673,15 +83680,15 @@ in sources."cookie-0.4.0" sources."cookie-signature-1.0.6" sources."cors-2.8.5" - sources."create-gatsby-1.6.0" + sources."create-gatsby-1.8.0" (sources."cross-spawn-6.0.5" // { dependencies = [ sources."semver-5.7.1" ]; }) sources."crypto-random-string-2.0.0" - sources."css-select-2.1.0" - sources."css-what-3.4.2" + sources."css-select-4.1.3" + sources."css-what-5.0.1" sources."debug-4.3.2" sources."decamelize-1.2.0" sources."decode-uri-component-0.2.0" @@ -83700,19 +83707,15 @@ in }) sources."diff-sequences-25.2.6" sources."dom-converter-0.2.0" - (sources."dom-serializer-0.2.2" // { - dependencies = [ - sources."domelementtype-2.2.0" - ]; - }) - sources."domelementtype-1.3.1" - sources."domhandler-2.4.2" - sources."domutils-1.7.0" + sources."dom-serializer-1.3.2" + sources."domelementtype-2.2.0" + sources."domhandler-4.2.0" + sources."domutils-2.7.0" sources."dot-prop-5.3.0" sources."dotenv-8.6.0" sources."duplexer3-0.1.4" sources."ee-first-1.1.1" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" sources."emoji-regex-7.0.3" sources."encodeurl-1.0.2" sources."end-of-stream-1.4.4" @@ -83784,8 +83787,8 @@ in sources."fs.realpath-1.0.0" sources."fsevents-2.3.2" sources."function-bind-1.1.1" - sources."gatsby-core-utils-2.6.0" - (sources."gatsby-recipes-0.17.0" // { + sources."gatsby-core-utils-2.8.0" + (sources."gatsby-recipes-0.19.0" // { dependencies = [ sources."cross-spawn-7.0.3" sources."execa-4.1.0" @@ -83799,7 +83802,7 @@ in sources."which-2.0.2" ]; }) - sources."gatsby-telemetry-2.6.0" + sources."gatsby-telemetry-2.8.0" sources."gensync-1.0.0-beta.2" sources."get-caller-file-2.0.5" sources."get-intrinsic-1.1.1" @@ -83812,7 +83815,7 @@ in sources."globals-11.12.0" sources."got-9.6.0" sources."graceful-fs-4.2.6" - sources."graphql-15.5.0" + sources."graphql-15.5.1" sources."graphql-compose-7.25.1" sources."graphql-subscriptions-1.2.1" sources."graphql-type-json-0.3.2" @@ -83821,13 +83824,9 @@ in sources."has-symbols-1.0.2" sources."has-yarn-2.1.0" sources."hicat-0.8.0" - sources."highlight.js-10.7.2" + sources."highlight.js-10.7.3" sources."hosted-git-info-3.0.8" - (sources."htmlparser2-3.10.1" // { - dependencies = [ - sources."entities-1.1.2" - ]; - }) + sources."htmlparser2-6.1.0" sources."http-cache-semantics-4.1.0" (sources."http-errors-1.7.2" // { dependencies = [ @@ -83946,8 +83945,8 @@ in sources."micromark-extension-mdxjs-0.3.0" sources."micromark-extension-mdxjs-esm-0.3.1" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."mimic-response-1.0.1" sources."min-indent-1.0.1" @@ -83962,12 +83961,12 @@ in sources."no-case-3.0.4" sources."node-eta-0.9.0" sources."node-fetch-2.6.1" - sources."node-object-hash-2.3.3" - sources."node-releases-1.1.72" + sources."node-object-hash-2.3.7" + sources."node-releases-1.1.73" sources."normalize-path-3.0.0" - sources."normalize-url-3.3.0" + sources."normalize-url-6.1.0" sources."npm-run-path-2.0.2" - sources."nth-check-1.0.2" + sources."nth-check-2.0.0" sources."object-assign-4.1.1" sources."object-inspect-1.10.3" sources."object-path-0.11.5" @@ -83989,7 +83988,7 @@ in }) sources."parse-entities-2.0.0" sources."parse-path-4.0.3" - sources."parse-url-5.0.2" + sources."parse-url-5.0.3" sources."parseurl-1.3.3" sources."pascal-case-3.1.2" sources."path-exists-4.0.0" @@ -84001,7 +84000,7 @@ in sources."picomatch-2.3.0" sources."pkg-dir-4.2.0" sources."prepend-http-2.0.0" - sources."prettier-2.3.0" + sources."prettier-2.3.1" sources."pretty-error-2.1.2" (sources."pretty-format-25.5.0" // { dependencies = [ @@ -84031,7 +84030,7 @@ in sources."read-1.0.7" sources."readable-stream-3.6.0" sources."readable-web-to-node-stream-3.0.1" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."redux-4.1.0" sources."regenerator-runtime-0.13.8" sources."registry-auth-token-4.2.1" @@ -84054,7 +84053,7 @@ in ]; }) sources."remark-stringify-8.1.1" - (sources."renderkid-2.0.5" // { + (sources."renderkid-2.0.7" // { dependencies = [ sources."ansi-regex-2.1.1" sources."strip-ansi-3.0.1" @@ -84194,7 +84193,7 @@ in }) sources."wrappy-1.0.2" sources."write-file-atomic-3.0.3" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xdg-basedir-4.0.0" sources."xstate-4.20.0" sources."xtend-4.0.2" @@ -84315,7 +84314,7 @@ in sources."is-my-ip-valid-1.0.0" sources."is-my-json-valid-2.20.5" sources."is-property-1.0.2" - sources."is-valid-domain-0.0.19" + sources."is-valid-domain-0.0.20" sources."json-buffer-2.0.11" sources."jsonpointer-4.1.0" sources."kvgraph-0.1.0" @@ -84325,8 +84324,8 @@ in sources."lodash.get-4.4.2" sources."looper-4.0.0" sources."lrucache-1.0.3" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimist-1.2.5" sources."mkdirp-0.5.5" sources."moment-2.29.1" @@ -84451,7 +84450,7 @@ in sources."tweetnacl-0.14.5" sources."tweetnacl-auth-0.3.1" sources."typedarray-to-buffer-4.0.0" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xtend-4.0.2" ]; buildInputs = globalBuildInputs; @@ -84491,9 +84490,9 @@ in sha512 = "xf6lKP7Ptas6bIdn/KvOn7UqkPS9/BBKcGCDVrsak/e0dWYeDZIOCMNwWxLp/zEjwBMSiPZtJdOdsIdmWap3bQ=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."ansi-styles-3.2.1" sources."chalk-2.4.2" @@ -84509,7 +84508,7 @@ in sources."@types/minimist-1.2.1" sources."@types/normalize-package-data-2.4.0" sources."agent-base-6.0.2" - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."ajv-formats-2.1.0" (sources."ansi-align-3.0.0" // { dependencies = [ @@ -84526,7 +84525,7 @@ in sources."arrify-1.0.1" (sources."ast-types-0.13.4" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."atomically-1.7.0" @@ -84596,7 +84595,7 @@ in sources."esprima-4.0.1" sources."estraverse-4.3.0" sources."esutils-2.0.3" - sources."execa-5.0.1" + sources."execa-5.1.1" sources."external-editor-3.1.0" sources."fast-deep-equal-3.1.3" sources."fast-levenshtein-2.0.6" @@ -84639,7 +84638,7 @@ in sources."inherits-2.0.4" sources."ini-2.0.0" sources."inquirer-7.3.3" - sources."inquirer-autocomplete-prompt-1.3.0" + sources."inquirer-autocomplete-prompt-1.4.0" sources."ip-1.1.5" sources."is-arrayish-0.2.1" sources."is-ci-2.0.0" @@ -84708,7 +84707,7 @@ in ]; }) sources."optionator-0.8.3" - sources."ora-5.4.0" + sources."ora-5.4.1" sources."os-tmpdir-1.0.2" sources."p-cancelable-1.1.0" sources."p-limit-2.3.0" @@ -84785,7 +84784,7 @@ in sources."signal-exit-3.0.3" sources."smart-buffer-4.1.0" sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."source-map-0.6.1" sources."spdx-correct-3.1.1" sources."spdx-exceptions-2.3.0" @@ -84826,7 +84825,7 @@ in sources."xdg-basedir-4.0.0" sources."xregexp-2.0.0" sources."yallist-4.0.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -84848,9 +84847,9 @@ in }; dependencies = [ sources."@ardatan/aggregate-error-0.0.6" - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."ansi-styles-3.2.1" sources."chalk-2.4.2" @@ -84938,12 +84937,12 @@ in sources."@kwsites/file-exists-1.1.1" sources."@kwsites/promise-deferred-1.1.1" sources."@microsoft/fetch-event-source-2.0.1" - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."@sindresorhus/is-0.14.0" sources."@szmarczak/http-timer-1.1.2" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/parse-json-4.0.0" sources."@types/websocket-1.0.2" sources."abort-controller-3.0.0" @@ -84960,7 +84959,6 @@ in sources."array-union-2.1.0" sources."asn1-0.2.4" sources."assert-plus-1.0.0" - sources."async-limiter-1.0.1" sources."asynckit-0.4.0" sources."at-least-node-1.0.0" sources."available-typed-arrays-1.0.4" @@ -84984,7 +84982,7 @@ in sources."callsites-3.1.0" (sources."camel-case-4.1.2" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."caseless-0.12.0" @@ -85095,7 +85093,7 @@ in }) sources."graphql-subscriptions-1.2.1" sources."graphql-type-json-0.3.2" - sources."graphql-ws-4.7.0" + sources."graphql-ws-4.9.0" sources."har-schema-2.0.0" sources."har-validator-5.1.5" sources."has-1.0.3" @@ -85193,7 +85191,7 @@ in }) (sources."lower-case-2.0.2" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."lowercase-keys-1.0.1" @@ -85206,8 +85204,8 @@ in sources."merge2-1.4.1" sources."meros-1.1.4" sources."micromatch-4.0.4" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -85220,7 +85218,7 @@ in sources."nice-try-1.0.5" (sources."no-case-3.0.4" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."node-emoji-1.10.0" @@ -85238,7 +85236,7 @@ in ]; }) sources."oas-schema-walker-1.1.5" - sources."oas-validator-5.0.6" + sources."oas-validator-5.0.7" sources."oauth-sign-0.9.0" sources."object-inspect-1.10.3" sources."object-is-1.1.5" @@ -85278,7 +85276,7 @@ in sources."parse-json-5.2.0" (sources."pascal-case-3.1.2" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."passwd-user-3.0.0" @@ -85343,13 +85341,9 @@ in sources."strip-ansi-5.2.0" sources."strip-eof-1.0.0" sources."strip-json-comments-2.0.1" - (sources."subscriptions-transport-ws-0.9.18" // { - dependencies = [ - sources."ws-5.2.2" - ]; - }) + sources."subscriptions-transport-ws-0.9.19" sources."supports-color-7.2.0" - (sources."swagger2openapi-7.0.6" // { + (sources."swagger2openapi-7.0.7" // { dependencies = [ sources."yargs-17.0.1" ]; @@ -85392,7 +85386,7 @@ in sources."yallist-4.0.0" sources."yaml-1.10.2" sources."yargs-16.0.3" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -85536,8 +85530,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimist-1.2.5" sources."ms-2.0.0" sources."negotiator-0.6.2" @@ -85624,10 +85618,10 @@ in gtop = nodeEnv.buildNodePackage { name = "gtop"; packageName = "gtop"; - version = "1.1.0"; + version = "1.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/gtop/-/gtop-1.1.0.tgz"; - sha512 = "WA8W0HxEsU9gGwpJDBRVv3l8DLUlxun5242vJw7kzv8CeQ29QUTYDfis5wMGwTOAU+curXHLHehFRR/IZflvbQ=="; + url = "https://registry.npmjs.org/gtop/-/gtop-1.1.1.tgz"; + sha512 = "5w10ZBVNHbahKpgm41YoKPVnT7hxuxBplBpvS91W7XXNC6huaRfH6BRBjMjWKMKBrZqgykHgaYW3PKu1CnY1Cg=="; }; dependencies = [ sources."abbrev-1.1.1" @@ -85637,7 +85631,7 @@ in sources."ansi-term-0.0.2" sources."ansicolors-0.3.2" sources."blessed-0.1.81" - sources."blessed-contrib-4.8.21" + sources."blessed-contrib-4.9.0" sources."bresenham-0.0.3" sources."buffers-0.1.1" sources."cardinal-2.1.1" @@ -85666,7 +85660,7 @@ in sources."lodash-4.17.21" sources."lodash.toarray-4.4.0" sources."map-canvas-0.1.5" - sources."marked-0.7.0" + sources."marked-2.1.2" (sources."marked-terminal-4.1.1" // { dependencies = [ sources."ansi-styles-4.3.0" @@ -85693,7 +85687,7 @@ in sources."supports-color-7.2.0" ]; }) - sources."systeminformation-4.34.23" + sources."systeminformation-5.7.7" sources."term-canvas-0.0.5" sources."type-fest-0.21.3" sources."wordwrap-0.0.3" @@ -85809,7 +85803,7 @@ in sources."component-emitter-1.3.0" sources."concat-map-0.0.1" sources."concat-stream-1.6.2" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."copy-descriptor-0.1.1" (sources."copy-props-2.0.5" // { dependencies = [ @@ -86589,7 +86583,7 @@ in sources."param-case-2.1.1" sources."relateurl-0.2.7" sources."source-map-0.6.1" - sources."uglify-js-3.13.8" + sources."uglify-js-3.13.9" sources."upper-case-1.1.3" ]; buildInputs = globalBuildInputs; @@ -86605,10 +86599,10 @@ in htmlhint = nodeEnv.buildNodePackage { name = "htmlhint"; packageName = "htmlhint"; - version = "0.14.2"; + version = "0.15.1"; src = fetchurl { - url = "https://registry.npmjs.org/htmlhint/-/htmlhint-0.14.2.tgz"; - sha512 = "lUCgGVZ/oyCkpgDkIa5IfClwX8Ppy11Dk7XdeVboAGSmKjIuOKx6yy86WS0W08KFtCRuxftzNy+KdQjM4UjqCA=="; + url = "https://registry.npmjs.org/htmlhint/-/htmlhint-0.15.1.tgz"; + sha512 = "uNbgqqBiD2ko4QQOYAHTPwDMluc9X81NwzlrJN7yExCoM6dHNgRFjVI+4TEdRrF/EqUzl1dpMUn7GYbu/qCKmA=="; }; dependencies = [ sources."ajv-6.12.6" @@ -86660,8 +86654,8 @@ in sources."json-schema-traverse-0.4.1" sources."json-stringify-safe-5.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."oauth-sign-0.9.0" sources."once-1.4.0" @@ -87065,8 +87059,8 @@ in sources."longest-1.0.1" sources."lowercase-keys-1.0.1" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimist-1.2.5" sources."mkdirp-0.5.5" sources."ms-2.0.0" @@ -87228,7 +87222,7 @@ in sources."node-fetch-2.6.1" sources."semver-5.7.1" sources."source-map-0.7.3" - sources."ws-6.2.1" + sources."ws-6.2.2" ]; buildInputs = globalBuildInputs; meta = { @@ -87278,7 +87272,7 @@ in sources."is-wsl-2.2.0" sources."isexe-2.0.0" sources."jquery-3.6.0" - sources."jquery.terminal-2.25.1" + sources."jquery.terminal-2.26.0" sources."jsonfile-2.4.0" sources."keyboardevent-key-polyfill-1.1.0" sources."line-reader-0.4.0" @@ -87342,7 +87336,7 @@ in sources."ansi-styles-3.2.1" (sources."ast-types-0.13.4" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."astral-regex-2.0.0" @@ -87483,11 +87477,11 @@ in ]; }) sources."lru-cache-5.1.1" - sources."macos-release-2.4.1" + sources."macos-release-2.5.0" sources."methods-1.1.2" sources."mime-2.5.2" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-1.2.5" @@ -87551,7 +87545,7 @@ in }) sources."smart-buffer-4.1.0" sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."source-map-0.6.1" sources."split2-3.2.2" sources."ssh-config-1.1.6" @@ -87610,7 +87604,7 @@ in }) sources."wrappy-1.0.2" sources."write-file-atomic-3.0.3" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xregexp-2.0.0" sources."yallist-3.1.1" ]; @@ -87624,20 +87618,21 @@ in bypassCache = true; reconstructLock = true; }; - "iosevka-https://github.com/be5invis/Iosevka/archive/v5.0.2.tar.gz" = nodeEnv.buildNodePackage { + "iosevka-https://github.com/be5invis/Iosevka/archive/v7.0.4.tar.gz" = nodeEnv.buildNodePackage { name = "iosevka"; packageName = "iosevka"; - version = "5.0.2"; + version = "7.0.4"; src = fetchurl { - name = "iosevka-5.0.2.tar.gz"; - url = "https://codeload.github.com/be5invis/Iosevka/tar.gz/v5.0.2"; - sha256 = "93aada519e3014b472b3ae1e33a139bcc588618239393735ff88d9d0822d7ced"; + name = "iosevka-7.0.4.tar.gz"; + url = "https://codeload.github.com/be5invis/Iosevka/tar.gz/v7.0.4"; + sha256 = "e0de45dde08463fbd02bced41893746235068167fd91051727dc048d66b91aeb"; }; dependencies = [ sources."@iarna/toml-2.2.5" - sources."@ot-builder/bin-composite-types-1.0.8" - sources."@ot-builder/bin-util-1.0.8" - (sources."@ot-builder/cli-help-shower-1.0.8" // { + sources."@msgpack/msgpack-2.7.0" + sources."@ot-builder/bin-composite-types-1.0.9" + sources."@ot-builder/bin-util-1.0.9" + (sources."@ot-builder/cli-help-shower-1.0.9" // { dependencies = [ sources."ansi-styles-4.3.0" sources."chalk-4.1.1" @@ -87647,7 +87642,7 @@ in sources."supports-color-7.2.0" ]; }) - (sources."@ot-builder/cli-proc-1.0.8" // { + (sources."@ot-builder/cli-proc-1.0.9" // { dependencies = [ sources."ansi-styles-4.3.0" sources."chalk-4.1.1" @@ -87657,7 +87652,7 @@ in sources."supports-color-7.2.0" ]; }) - (sources."@ot-builder/cli-shared-1.0.8" // { + (sources."@ot-builder/cli-shared-1.0.9" // { dependencies = [ sources."ansi-styles-4.3.0" sources."chalk-4.1.1" @@ -87667,41 +87662,41 @@ in sources."supports-color-7.2.0" ]; }) - sources."@ot-builder/common-impl-1.0.8" - sources."@ot-builder/errors-1.0.8" - sources."@ot-builder/io-bin-cff-1.0.8" - sources."@ot-builder/io-bin-encoding-1.0.8" - sources."@ot-builder/io-bin-ext-private-1.0.8" - sources."@ot-builder/io-bin-font-1.0.8" - sources."@ot-builder/io-bin-glyph-store-1.0.8" - sources."@ot-builder/io-bin-layout-1.0.8" - sources."@ot-builder/io-bin-metadata-1.0.8" - sources."@ot-builder/io-bin-metric-1.0.8" - sources."@ot-builder/io-bin-name-1.0.8" - sources."@ot-builder/io-bin-sfnt-1.0.8" - sources."@ot-builder/io-bin-ttf-1.0.8" - sources."@ot-builder/ot-1.0.8" - sources."@ot-builder/ot-encoding-1.0.8" - sources."@ot-builder/ot-ext-private-1.0.8" - sources."@ot-builder/ot-glyphs-1.0.8" - sources."@ot-builder/ot-layout-1.0.8" - sources."@ot-builder/ot-metadata-1.0.8" - sources."@ot-builder/ot-name-1.0.8" - sources."@ot-builder/ot-sfnt-1.0.8" - sources."@ot-builder/ot-standard-glyph-namer-1.0.8" - sources."@ot-builder/prelude-1.0.8" - sources."@ot-builder/primitive-1.0.8" - sources."@ot-builder/rectify-1.0.8" - sources."@ot-builder/stat-glyphs-1.0.8" - sources."@ot-builder/trace-1.0.8" - sources."@ot-builder/var-store-1.0.8" - sources."@ot-builder/variance-1.0.8" + sources."@ot-builder/common-impl-1.0.9" + sources."@ot-builder/errors-1.0.9" + sources."@ot-builder/io-bin-cff-1.0.9" + sources."@ot-builder/io-bin-encoding-1.0.9" + sources."@ot-builder/io-bin-ext-private-1.0.9" + sources."@ot-builder/io-bin-font-1.0.9" + sources."@ot-builder/io-bin-glyph-store-1.0.9" + sources."@ot-builder/io-bin-layout-1.0.9" + sources."@ot-builder/io-bin-metadata-1.0.9" + sources."@ot-builder/io-bin-metric-1.0.9" + sources."@ot-builder/io-bin-name-1.0.9" + sources."@ot-builder/io-bin-sfnt-1.0.9" + sources."@ot-builder/io-bin-ttf-1.0.9" + sources."@ot-builder/ot-1.0.9" + sources."@ot-builder/ot-encoding-1.0.9" + sources."@ot-builder/ot-ext-private-1.0.9" + sources."@ot-builder/ot-glyphs-1.0.9" + sources."@ot-builder/ot-layout-1.0.9" + sources."@ot-builder/ot-metadata-1.0.9" + sources."@ot-builder/ot-name-1.0.9" + sources."@ot-builder/ot-sfnt-1.0.9" + sources."@ot-builder/ot-standard-glyph-namer-1.0.9" + sources."@ot-builder/prelude-1.0.9" + sources."@ot-builder/primitive-1.0.9" + sources."@ot-builder/rectify-1.0.9" + sources."@ot-builder/stat-glyphs-1.0.9" + sources."@ot-builder/trace-1.0.9" + sources."@ot-builder/var-store-1.0.9" + sources."@ot-builder/variance-1.0.9" sources."@unicode/unicode-13.0.0-1.0.6" sources."aglfn-1.0.2" sources."amdefine-1.0.1" sources."ansi-regex-5.0.0" sources."ansi-styles-3.2.1" - sources."argparse-1.0.10" + sources."argparse-2.0.1" sources."async-0.9.2" sources."at-least-node-1.0.0" sources."atob-2.1.2" @@ -87710,7 +87705,7 @@ in sources."camelcase-5.3.1" sources."chainsaw-0.0.9" sources."chalk-2.4.2" - sources."cldr-5.8.0" + sources."cldr-6.1.1" sources."cli-cursor-3.1.0" sources."clipper-lib-6.4.2" sources."cliui-7.0.4" @@ -87757,7 +87752,7 @@ in sources."fast-levenshtein-2.0.6" sources."filelist-1.0.2" sources."find-up-4.1.0" - sources."fs-extra-9.1.0" + sources."fs-extra-10.0.0" sources."fs.realpath-1.0.0" sources."get-caller-file-2.0.5" sources."glob-7.1.7" @@ -87782,8 +87777,8 @@ in sources."once-1.4.0" sources."onetime-5.1.2" sources."optionator-0.8.3" - sources."ot-builder-1.0.8" - (sources."otb-ttc-bundle-1.0.8" // { + sources."ot-builder-1.0.9" + (sources."otb-ttc-bundle-1.0.9" // { dependencies = [ sources."ansi-styles-4.3.0" sources."chalk-4.1.1" @@ -87823,12 +87818,7 @@ in sources."source-map-0.6.1" sources."source-map-resolve-0.5.3" sources."source-map-url-0.4.1" - (sources."spiro-2.0.0" // { - dependencies = [ - sources."tslib-1.14.1" - ]; - }) - sources."sprintf-js-1.0.3" + sources."spiro-3.0.0" sources."string-width-4.2.2" sources."strip-ansi-6.0.0" (sources."stylus-0.54.8" // { @@ -87841,9 +87831,9 @@ in sources."through-2.3.8" sources."toposort-2.0.2" sources."traverse-0.3.9" - sources."tslib-2.2.0" + sources."tslib-2.3.0" sources."type-check-0.3.2" - sources."typo-geom-0.11.2" + sources."typo-geom-0.12.1" sources."unicoderegexp-0.4.1" sources."universalify-2.0.0" sources."urix-0.1.0" @@ -87854,6 +87844,7 @@ in sources."cliui-6.0.0" sources."color-convert-2.0.1" sources."color-name-1.1.4" + sources."fs-extra-9.1.0" sources."has-flag-4.0.0" sources."supports-color-7.2.0" sources."wrap-ansi-6.2.0" @@ -87862,7 +87853,7 @@ in sources."yargs-parser-18.1.3" ]; }) - sources."wawoff2-1.0.2" + sources."wawoff2-2.0.0" sources."which-2.0.2" sources."which-module-2.0.0" sources."word-wrap-1.2.3" @@ -87875,12 +87866,12 @@ in ]; }) sources."wrappy-1.0.2" - sources."xmldom-0.4.0" + sources."xmldom-0.6.0" sources."xpath-0.0.32" sources."y18n-5.0.8" sources."yallist-4.0.0" sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -88011,30 +88002,38 @@ in joplin = nodeEnv.buildNodePackage { name = "joplin"; packageName = "joplin"; - version = "1.8.1"; + version = "2.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/joplin/-/joplin-1.8.1.tgz"; - sha512 = "ukyHTdD3LgHl5A9No350YkAlxMRoWVhP9FR8MVhyXS1I8p6kSW27FZF3r8FBLxfwHnGvRQM7gwBRHJDKprEG8A=="; + url = "https://registry.npmjs.org/joplin/-/joplin-2.0.1.tgz"; + sha512 = "NFjW9O1SZp6zN8RUjQA8DGTuoAljN1zKNUpDcEX7uY3hG/V4nqZtZVF0wzZ3EN/UWkx/lIP2FohRv4cUtdrO+A=="; }; dependencies = [ sources."@braintree/sanitize-url-3.1.0" sources."@cronvel/get-pixels-3.4.0" - sources."@joplin/fork-htmlparser2-4.1.26" - sources."@joplin/fork-sax-1.2.30" - sources."@joplin/lib-1.8.2" - (sources."@joplin/renderer-1.8.2" // { + sources."@joplin/fork-htmlparser2-4.1.27" + sources."@joplin/fork-sax-1.2.31" + (sources."@joplin/lib-2.0.3" // { + dependencies = [ + (sources."@joplin/renderer-1.8.2" // { + dependencies = [ + sources."fs-extra-8.1.0" + sources."uslug-git+https://github.com/laurent22/uslug.git#emoji-support" + ]; + }) + ]; + }) + (sources."@joplin/renderer-2.0.3" // { dependencies = [ sources."fs-extra-8.1.0" - sources."jsonfile-4.0.0" sources."uslug-git+https://github.com/laurent22/uslug.git#emoji-support" ]; }) - (sources."@joplin/turndown-4.0.48" // { + (sources."@joplin/turndown-4.0.49" // { dependencies = [ sources."css-2.2.4" ]; }) - sources."@joplin/turndown-plugin-gfm-1.0.30" + sources."@joplin/turndown-plugin-gfm-1.0.31" sources."abab-2.0.5" sources."abbrev-1.1.1" sources."acorn-7.4.1" @@ -88074,7 +88073,7 @@ in sources."async-mutex-0.1.4" sources."asynckit-0.4.0" sources."atob-2.1.2" - (sources."aws-sdk-2.918.0" // { + (sources."aws-sdk-2.932.0" // { dependencies = [ sources."sax-1.2.1" sources."uuid-3.3.2" @@ -88108,11 +88107,10 @@ in sources."caseless-0.12.0" sources."chalk-4.1.1" sources."charenc-0.0.2" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."chownr-1.1.4" sources."chroma-js-2.1.2" sources."clean-css-4.2.3" - sources."clean-html-1.5.0" sources."cliss-0.0.2" sources."code-point-at-1.1.0" sources."color-3.1.2" @@ -88121,7 +88119,7 @@ in sources."color-string-1.5.5" sources."combined-stream-1.0.8" sources."command-line-usage-4.1.0" - sources."commander-2.17.1" + sources."commander-6.2.1" sources."compare-version-0.1.2" sources."compare-versions-3.6.0" sources."concat-map-0.0.1" @@ -88153,7 +88151,11 @@ in sources."d3-contour-1.3.2" sources."d3-dispatch-1.0.6" sources."d3-drag-1.2.5" - sources."d3-dsv-1.2.0" + (sources."d3-dsv-1.2.0" // { + dependencies = [ + sources."commander-2.20.3" + ]; + }) sources."d3-ease-1.0.7" sources."d3-fetch-1.2.0" sources."d3-force-1.2.1" @@ -88179,7 +88181,7 @@ in sources."dagre-d3-0.6.4" sources."dashdash-1.14.1" sources."data-urls-1.1.0" - sources."debug-3.2.7" + sources."debug-4.3.2" sources."decode-uri-component-0.2.0" sources."decompress-response-4.2.1" sources."deep-extend-0.6.0" @@ -88198,7 +88200,7 @@ in sources."domelementtype-2.2.0" sources."domexception-1.0.1" sources."domhandler-3.3.0" - (sources."domutils-2.6.0" // { + (sources."domutils-2.7.0" // { dependencies = [ sources."domhandler-4.2.0" ]; @@ -88247,11 +88249,7 @@ in sources."form-data-2.5.1" sources."format-0.2.2" sources."fs-constants-1.0.0" - (sources."fs-extra-5.0.0" // { - dependencies = [ - sources."jsonfile-4.0.0" - ]; - }) + sources."fs-extra-5.0.0" sources."fs-minipass-1.2.7" sources."fs.realpath-1.0.0" sources."fsevents-2.3.2" @@ -88276,23 +88274,17 @@ in sources."has-flag-4.0.0" sources."has-unicode-2.0.1" sources."he-1.2.0" - sources."highlight.js-10.7.2" + sources."highlight.js-10.7.3" sources."html-encoding-sniffer-1.0.2" sources."html-entities-1.4.0" - sources."html-minifier-3.5.21" - (sources."htmlparser2-3.10.1" // { + (sources."html-minifier-3.5.21" // { dependencies = [ - (sources."dom-serializer-0.2.2" // { + sources."commander-2.17.1" + (sources."uglify-js-3.4.10" // { dependencies = [ - sources."domelementtype-2.2.0" - sources."entities-2.2.0" + sources."commander-2.19.0" ]; }) - sources."domelementtype-1.3.1" - sources."domhandler-2.4.2" - sources."domutils-1.7.0" - sources."entities-1.1.2" - sources."readable-stream-3.6.0" ]; }) sources."http-errors-1.8.0" @@ -88303,6 +88295,7 @@ in (sources."image-data-uri-2.0.1" // { dependencies = [ sources."fs-extra-0.26.7" + sources."jsonfile-2.4.0" ]; }) sources."image-type-3.1.0" @@ -88317,11 +88310,13 @@ in }) (sources."inspect-parameters-declaration-0.0.9" // { dependencies = [ + sources."commander-2.20.3" sources."magicli-0.0.5" ]; }) (sources."inspect-property-0.0.6" // { dependencies = [ + sources."commander-2.20.3" sources."inspect-function-0.3.4" (sources."inspect-parameters-declaration-0.0.8" // { dependencies = [ @@ -88370,20 +88365,16 @@ in sources."json-schema-0.2.3" sources."json-schema-traverse-0.4.1" sources."json-stringify-safe-5.0.1" - sources."jsonfile-2.4.0" + sources."jsonfile-4.0.0" sources."jsprim-1.4.1" - (sources."katex-0.13.11" // { - dependencies = [ - sources."commander-6.2.1" - ]; - }) + sources."katex-0.13.11" sources."keytar-7.7.0" sources."khroma-1.4.1" sources."klaw-1.3.1" sources."lazyness-1.2.0" sources."levenshtein-1.0.5" sources."levn-0.3.0" - sources."linkify-it-2.2.0" + sources."linkify-it-3.0.2" sources."locate-path-2.0.0" sources."lodash-4.17.21" sources."lodash-es-4.17.21" @@ -88403,6 +88394,7 @@ in (sources."markdown-it-10.0.0" // { dependencies = [ sources."entities-2.0.3" + sources."linkify-it-2.2.0" ]; }) sources."markdown-it-abbr-1.0.4" @@ -88416,7 +88408,6 @@ in (sources."markdown-it-multimd-table-4.1.0" // { dependencies = [ sources."entities-2.0.3" - sources."linkify-it-3.0.2" sources."markdown-it-11.0.1" ]; }) @@ -88426,17 +88417,14 @@ in sources."md5-2.3.0" sources."md5-file-4.0.0" sources."mdurl-1.0.1" - sources."mermaid-8.10.1" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mermaid-8.10.2" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-response-2.1.0" (sources."minify-4.1.3" // { dependencies = [ sources."commander-2.20.3" - sources."debug-4.3.2" sources."html-minifier-4.0.0" - sources."ms-2.1.2" - sources."uglify-js-3.13.8" ]; }) sources."minimatch-3.0.4" @@ -88451,15 +88439,19 @@ in sources."mkdirp-classic-0.5.3" sources."moment-2.29.1" sources."moment-mini-2.24.0" - sources."ms-2.1.3" + sources."ms-2.1.2" sources."multiparty-4.2.2" sources."mustache-4.2.0" sources."nanoid-3.1.23" sources."napi-build-utils-1.0.2" sources."ndarray-1.0.19" sources."ndarray-pack-1.2.1" - sources."needle-2.6.0" - sources."nextgen-events-1.4.0" + (sources."needle-2.6.0" // { + dependencies = [ + sources."debug-3.2.7" + ]; + }) + sources."nextgen-events-1.5.2" sources."no-case-2.3.2" (sources."node-abi-2.30.0" // { dependencies = [ @@ -88489,7 +88481,6 @@ in sources."semver-5.7.1" ]; }) - sources."noop-logger-0.1.1" sources."nopt-4.0.3" sources."normalize-path-3.0.0" sources."npm-bundled-1.1.2" @@ -88502,6 +88493,7 @@ in sources."object-assign-4.1.1" (sources."object-to-arguments-0.0.8" // { dependencies = [ + sources."commander-2.20.3" sources."inspect-parameters-declaration-0.0.10" sources."magicli-0.0.5" ]; @@ -88527,7 +88519,7 @@ in sources."pipe-functions-1.3.0" sources."pn-1.1.0" sources."pngjs-5.0.0" - sources."prebuild-install-6.1.2" + sources."prebuild-install-6.1.3" sources."prelude-ls-1.1.2" sources."process-nextick-args-2.0.1" sources."promise-7.3.1" @@ -88549,7 +88541,7 @@ in sources."safe-buffer-5.1.2" ]; }) - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."reduce-flatten-1.0.1" sources."redux-3.7.2" sources."relateurl-0.2.7" @@ -88628,6 +88620,7 @@ in }) (sources."stringify-parameters-0.0.4" // { dependencies = [ + sources."commander-2.20.3" sources."magicli-0.0.5" ]; }) @@ -88688,11 +88681,7 @@ in sources."type-check-0.3.2" sources."typical-2.6.1" sources."uc.micro-1.0.6" - (sources."uglify-js-3.4.10" // { - dependencies = [ - sources."commander-2.19.0" - ]; - }) + sources."uglify-js-3.13.9" sources."uglifycss-0.0.29" sources."uid-safe-2.1.5" sources."unc-path-regex-0.1.2" @@ -88731,7 +88720,7 @@ in ]; }) sources."wrappy-1.0.2" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xml-name-validator-3.0.0" sources."xml2js-0.4.23" sources."xmlbuilder-11.0.1" @@ -88752,10 +88741,10 @@ in js-beautify = nodeEnv.buildNodePackage { name = "js-beautify"; packageName = "js-beautify"; - version = "1.13.13"; + version = "1.14.0"; src = fetchurl { - url = "https://registry.npmjs.org/js-beautify/-/js-beautify-1.13.13.tgz"; - sha512 = "oH+nc0U5mOAqX8M5JO1J0Pw/7Q35sAdOsM5W3i87pir9Ntx6P/5Gx1xLNoK+MGyvHk4rqqRCE4Oq58H6xl2W7A=="; + url = "https://registry.npmjs.org/js-beautify/-/js-beautify-1.14.0.tgz"; + sha512 = "yuck9KirNSCAwyNJbqW+BxJqJ0NLJ4PwBUzQQACl5O3qHMBXVkXb/rD0ilh/Lat/tn88zSZ+CAHOlk0DsY7GuQ=="; }; dependencies = [ sources."abbrev-1.1.1" @@ -88763,7 +88752,7 @@ in sources."brace-expansion-1.1.11" sources."commander-2.20.3" sources."concat-map-0.0.1" - sources."config-chain-1.1.12" + sources."config-chain-1.1.13" sources."editorconfig-0.15.3" sources."fs.realpath-1.0.0" sources."glob-7.1.7" @@ -88772,7 +88761,6 @@ in sources."ini-1.3.8" sources."lru-cache-4.1.5" sources."minimatch-3.0.4" - sources."mkdirp-1.0.4" sources."nopt-5.0.0" sources."once-1.4.0" sources."path-is-absolute-1.0.1" @@ -88823,7 +88811,7 @@ in sha512 = "sxKt7h0vzCd+3Y81Ey2qinupL6DpRSZJclS04ugHDNmRUXGzqicMJ6iwayhSA0S0DwwX30c5ozyUthr1QKF6uw=="; }; dependencies = [ - sources."@babel/parser-7.14.4" + sources."@babel/parser-7.14.7" sources."argparse-1.0.10" sources."bluebird-3.7.2" sources."catharsis-0.9.0" @@ -88836,7 +88824,7 @@ in sources."lodash-4.17.21" sources."markdown-it-10.0.0" sources."markdown-it-anchor-5.3.0" - sources."marked-2.0.6" + sources."marked-2.1.2" sources."mdurl-1.0.1" sources."mkdirp-1.0.4" sources."requizzle-0.2.3" @@ -88986,8 +88974,8 @@ in sources."lodash-4.17.21" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."ms-2.1.3" sources."native-promise-only-0.8.1" sources."object-inspect-1.10.3" @@ -89129,7 +89117,7 @@ in sources."keyv-3.1.0" sources."latest-version-5.1.0" sources."lodash-4.17.21" - sources."lodash-id-0.14.0" + sources."lodash-id-0.14.1" sources."lowdb-1.0.0" sources."lowercase-keys-1.0.1" sources."lru-cache-6.0.0" @@ -89147,8 +89135,8 @@ in }) sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-response-1.0.1" sources."minimist-1.2.5" (sources."morgan-1.10.0" // { @@ -89246,7 +89234,7 @@ in sources."y18n-5.0.8" sources."yallist-4.0.0" sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -89293,13 +89281,13 @@ in sha512 = "JbF3PiO1wNawJnOQlb4nJZ2rvDfDWnD7ROCdzqgFXhqi3XTNXBqjpoC7PT3ylfNR6BGibjchndH27VieqyMA0A=="; }; dependencies = [ - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."@oclif/command-1.8.0" (sources."@oclif/config-1.17.0" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."@oclif/errors-1.3.4" @@ -89352,11 +89340,11 @@ in sources."clean-stack-3.0.1" sources."cli-cursor-3.1.0" sources."cli-progress-3.9.0" - (sources."cli-ux-5.5.1" // { + (sources."cli-ux-5.6.2" // { dependencies = [ sources."has-flag-4.0.0" - sources."supports-color-7.2.0" - sources."tslib-2.2.0" + sources."supports-color-8.1.1" + sources."tslib-2.3.0" ]; }) sources."cli-width-3.0.0" @@ -89418,7 +89406,7 @@ in sources."function-bind-1.1.1" sources."get-intrinsic-1.1.1" sources."glob-parent-5.1.2" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."graceful-fs-4.2.6" sources."has-1.0.3" sources."has-flag-3.0.0" @@ -89456,8 +89444,8 @@ in }) sources."merge2-1.4.1" sources."micromatch-4.0.4" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."moment-2.29.1" sources."ms-2.1.2" @@ -89559,16 +89547,16 @@ in karma = nodeEnv.buildNodePackage { name = "karma"; packageName = "karma"; - version = "6.3.2"; + version = "6.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/karma/-/karma-6.3.2.tgz"; - sha512 = "fo4Wt0S99/8vylZMxNj4cBFyOBBnC1bewZ0QOlePij/2SZVWxqbyLeIddY13q6URa2EpLRW8ixvFRUMjkmo1bw=="; + url = "https://registry.npmjs.org/karma/-/karma-6.3.4.tgz"; + sha512 = "hbhRogUYIulfkBTZT7xoPrCYhRBnBoqbbL4fszWD0ReFGUxU+LYBr3dwKdAluaDQ/ynT9/7C+Lf7pPNW4gSx4Q=="; }; dependencies = [ sources."@types/component-emitter-1.2.10" sources."@types/cookie-0.4.0" sources."@types/cors-2.8.10" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."accepts-1.3.7" sources."ansi-regex-5.0.0" sources."ansi-styles-4.3.0" @@ -89581,7 +89569,7 @@ in sources."brace-expansion-1.1.11" sources."braces-3.0.2" sources."bytes-3.1.0" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."cliui-7.0.4" sources."color-convert-2.0.1" sources."color-name-1.1.4" @@ -89645,8 +89633,8 @@ in }) sources."media-typer-0.3.0" sources."mime-2.5.2" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."ms-2.0.0" sources."negotiator-0.6.2" @@ -89661,7 +89649,7 @@ in sources."qs-6.7.0" sources."range-parser-1.2.1" sources."raw-body-2.4.0" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."require-directory-2.1.1" sources."requires-port-1.0.0" sources."rfdc-1.3.0" @@ -89707,18 +89695,288 @@ in sources."ws-7.4.6" sources."y18n-5.0.8" sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { description = "Spectacular Test Runner for JavaScript."; - homepage = "http://karma-runner.github.io/"; + homepage = "https://karma-runner.github.io/"; license = "MIT"; }; production = true; bypassCache = true; reconstructLock = true; }; + keyoxide = nodeEnv.buildNodePackage { + name = "keyoxide"; + packageName = "keyoxide"; + version = "0.3.0"; + src = fetchurl { + url = "https://registry.npmjs.org/keyoxide/-/keyoxide-0.3.0.tgz"; + sha512 = "LTy8I1D5hkQptMCy7XdSEY7GB5QG8TzOgp28D9B/XNt/wKKr2hRwrcW1eLGzazJQkMrdVg2AASLpgmFzPpVPrw=="; + }; + dependencies = [ + sources."JSONStream-1.3.5" + sources."acorn-7.4.1" + sources."acorn-node-1.8.2" + sources."acorn-walk-7.2.0" + sources."ansi-colors-4.1.1" + sources."ansi-regex-5.0.0" + sources."ansi-styles-4.3.0" + (sources."asn1.js-5.4.1" // { + dependencies = [ + sources."bn.js-4.12.0" + ]; + }) + (sources."assert-1.5.0" // { + dependencies = [ + sources."inherits-2.0.1" + sources."util-0.10.3" + ]; + }) + sources."available-typed-arrays-1.0.4" + sources."balanced-match-1.0.2" + sources."base64-js-1.5.1" + sources."bent-7.3.12" + sources."bn.js-5.2.0" + sources."brace-expansion-1.1.11" + sources."brorand-1.1.0" + sources."browser-pack-6.1.0" + sources."browser-resolve-2.0.0" + sources."browserify-17.0.0" + sources."browserify-aes-1.2.0" + sources."browserify-cipher-1.0.1" + sources."browserify-des-1.0.2" + sources."browserify-rsa-4.1.0" + (sources."browserify-sign-4.2.1" // { + dependencies = [ + sources."readable-stream-3.6.0" + ]; + }) + sources."browserify-zlib-0.2.0" + sources."buffer-5.2.1" + sources."buffer-from-1.1.1" + sources."buffer-xor-1.0.3" + sources."builtin-status-codes-3.0.0" + sources."bytesish-0.4.4" + sources."cached-path-relative-1.0.2" + sources."call-bind-1.0.2" + sources."caseless-0.12.0" + sources."cipher-base-1.0.4" + sources."cliui-7.0.4" + sources."color-convert-2.0.1" + sources."color-name-1.1.4" + sources."combine-source-map-0.8.0" + sources."concat-map-0.0.1" + sources."concat-stream-1.6.2" + sources."console-browserify-1.2.0" + sources."constants-browserify-1.0.0" + sources."convert-source-map-1.1.3" + sources."core-util-is-1.0.2" + (sources."create-ecdh-4.0.4" // { + dependencies = [ + sources."bn.js-4.12.0" + ]; + }) + sources."create-hash-1.2.0" + sources."create-hmac-1.1.7" + sources."crypto-browserify-3.12.0" + sources."dash-ast-1.0.0" + sources."decode-uri-component-0.2.0" + sources."define-properties-1.1.3" + sources."defined-1.0.0" + sources."deps-sort-2.0.1" + sources."des.js-1.0.1" + sources."detective-5.2.0" + (sources."diffie-hellman-5.0.3" // { + dependencies = [ + sources."bn.js-4.12.0" + ]; + }) + sources."doipjs-0.11.2" + sources."domain-browser-1.2.0" + sources."duplexer2-0.1.4" + (sources."elliptic-6.5.4" // { + dependencies = [ + sources."bn.js-4.12.0" + ]; + }) + sources."emoji-regex-8.0.0" + sources."enquirer-2.3.6" + sources."es-abstract-1.18.3" + sources."es-to-primitive-1.2.1" + sources."escalade-3.1.1" + sources."events-3.3.0" + sources."evp_bytestokey-1.0.3" + sources."fast-safe-stringify-2.0.7" + sources."filter-obj-1.1.0" + sources."foreach-2.0.5" + sources."fs.realpath-1.0.0" + sources."function-bind-1.1.1" + sources."get-assigned-identifiers-1.2.0" + sources."get-caller-file-2.0.5" + sources."get-intrinsic-1.1.1" + sources."glob-7.1.7" + sources."graceful-fs-4.2.6" + sources."has-1.0.3" + sources."has-bigints-1.0.1" + sources."has-symbols-1.0.2" + (sources."hash-base-3.1.0" // { + dependencies = [ + sources."readable-stream-3.6.0" + ]; + }) + sources."hash.js-1.1.7" + sources."hmac-drbg-1.0.1" + sources."htmlescape-1.1.1" + sources."https-browserify-1.0.0" + sources."ieee754-1.2.1" + sources."imurmurhash-0.1.4" + sources."inflight-1.0.6" + sources."inherits-2.0.4" + sources."inline-source-map-0.6.2" + sources."insert-module-globals-7.2.1" + sources."is-arguments-1.1.0" + sources."is-bigint-1.0.2" + sources."is-boolean-object-1.1.1" + sources."is-buffer-1.1.6" + sources."is-callable-1.2.3" + sources."is-core-module-2.4.0" + sources."is-date-object-1.0.4" + sources."is-fullwidth-code-point-3.0.0" + sources."is-generator-function-1.0.9" + sources."is-negative-zero-2.0.1" + sources."is-number-object-1.0.5" + sources."is-plain-obj-2.1.0" + sources."is-regex-1.1.3" + sources."is-stream-2.0.0" + sources."is-string-1.0.6" + sources."is-symbol-1.0.4" + sources."is-typed-array-1.1.5" + sources."isarray-1.0.0" + sources."jsonparse-1.3.1" + sources."labeled-stream-splicer-2.0.2" + sources."lodash.memoize-3.0.4" + sources."md5.js-1.3.5" + sources."merge-options-3.0.4" + (sources."miller-rabin-4.0.1" // { + dependencies = [ + sources."bn.js-4.12.0" + ]; + }) + sources."minimalistic-assert-1.0.1" + sources."minimalistic-crypto-utils-1.0.1" + sources."minimatch-3.0.4" + sources."minimist-1.2.5" + sources."mkdirp-classic-0.5.3" + sources."module-deps-6.2.3" + sources."node-fetch-2.6.1" + sources."node-localstorage-1.3.1" + sources."object-assign-4.1.1" + sources."object-inspect-1.10.3" + sources."object-keys-1.1.1" + sources."object.assign-4.1.2" + sources."once-1.4.0" + sources."openpgp-4.10.10" + sources."os-browserify-0.3.0" + sources."pako-1.0.11" + sources."parents-1.0.1" + sources."parse-asn1-5.1.6" + sources."path-browserify-1.0.1" + sources."path-is-absolute-1.0.1" + sources."path-parse-1.0.7" + sources."path-platform-0.11.15" + sources."pbkdf2-3.1.2" + sources."prettier-2.3.1" + sources."process-0.11.10" + sources."process-nextick-args-2.0.1" + (sources."public-encrypt-4.0.3" // { + dependencies = [ + sources."bn.js-4.12.0" + ]; + }) + sources."punycode-1.4.1" + sources."query-string-6.14.1" + sources."querystring-0.2.0" + sources."querystring-es3-0.2.1" + sources."randombytes-2.1.0" + sources."randomfill-1.0.4" + sources."read-only-stream-2.0.0" + (sources."readable-stream-2.3.7" // { + dependencies = [ + sources."safe-buffer-5.1.2" + sources."string_decoder-1.1.1" + ]; + }) + sources."require-directory-2.1.1" + sources."resolve-1.20.0" + sources."ripemd160-2.0.2" + sources."safe-buffer-5.2.1" + sources."safer-buffer-2.1.2" + sources."sha.js-2.4.11" + sources."shasum-object-1.0.0" + sources."shell-quote-1.7.2" + sources."simple-concat-1.0.1" + sources."slide-1.1.6" + sources."source-map-0.5.7" + sources."split-on-first-1.1.0" + (sources."stream-browserify-3.0.0" // { + dependencies = [ + sources."readable-stream-3.6.0" + ]; + }) + sources."stream-combiner2-1.1.1" + (sources."stream-http-3.2.0" // { + dependencies = [ + sources."readable-stream-3.6.0" + ]; + }) + sources."stream-splicer-2.0.1" + sources."strict-uri-encode-2.0.0" + sources."string-width-4.2.2" + sources."string.prototype.trimend-1.0.4" + sources."string.prototype.trimstart-1.0.4" + sources."string_decoder-1.3.0" + sources."strip-ansi-6.0.0" + sources."subarg-1.0.0" + sources."syntax-error-1.4.0" + sources."through-2.3.8" + sources."through2-2.0.5" + sources."timers-browserify-1.4.2" + sources."tty-browserify-0.0.1" + sources."typedarray-0.0.6" + sources."umd-3.0.3" + sources."unbox-primitive-1.0.1" + sources."undeclared-identifiers-1.1.3" + (sources."url-0.11.0" // { + dependencies = [ + sources."punycode-1.3.2" + ]; + }) + sources."util-0.12.4" + sources."util-deprecate-1.0.2" + sources."valid-url-1.0.9" + sources."vm-browserify-1.1.2" + sources."which-boxed-primitive-1.0.2" + sources."which-typed-array-1.1.4" + sources."wrap-ansi-7.0.0" + sources."wrappy-1.0.2" + sources."write-file-atomic-1.3.4" + sources."xtend-4.0.2" + sources."y18n-5.0.8" + sources."yargs-16.2.0" + sources."yargs-parser-20.2.9" + ]; + buildInputs = globalBuildInputs; + meta = { + description = "CLI for Keyoxide"; + homepage = "https://keyoxide.org"; + license = "AGPL-3.0-or-later"; + }; + production = true; + bypassCache = true; + reconstructLock = true; + }; lcov-result-merger = nodeEnv.buildNodePackage { name = "lcov-result-merger"; packageName = "lcov-result-merger"; @@ -89738,7 +89996,7 @@ in sources."clone-stats-1.0.0" sources."cloneable-readable-1.1.3" sources."concat-map-0.0.1" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."core-util-is-1.0.2" sources."define-properties-1.1.3" sources."duplexify-3.7.1" @@ -89933,8 +90191,8 @@ in sources."mimic-fn-2.1.0" ]; }) - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" @@ -90179,8 +90437,8 @@ in sources."locate-path-5.0.0" sources."lodash-4.17.21" sources."log-symbols-2.2.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-1.2.5" @@ -90319,9 +90577,9 @@ in sha512 = "DD/i1znurfOmNJb0OBw66NmNqiM8kF6uIrzrJ0wGE3VNdzeOhz9ziWLYiRaZDGGwgbcjOo6eIfcx9O5Qynz+kg=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."ansi-styles-3.2.1" sources."chalk-2.4.2" @@ -90378,6 +90636,7 @@ in }) (sources."@lerna/npm-dist-tag-4.0.0" // { dependencies = [ + sources."make-fetch-happen-8.0.14" sources."npm-registry-fetch-9.0.0" ]; }) @@ -90401,6 +90660,7 @@ in sources."@lerna/prompt-4.0.0" (sources."@lerna/publish-4.0.0" // { dependencies = [ + sources."make-fetch-happen-8.0.14" sources."npm-registry-fetch-9.0.0" ]; }) @@ -90421,37 +90681,37 @@ in sources."write-file-atomic-3.0.3" ]; }) - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."@npmcli/ci-detect-1.3.0" - sources."@npmcli/git-2.0.9" + sources."@npmcli/git-2.1.0" sources."@npmcli/installed-package-contents-1.0.7" sources."@npmcli/move-file-1.1.2" sources."@npmcli/node-gyp-1.0.2" sources."@npmcli/promise-spawn-1.3.2" sources."@npmcli/run-script-1.8.5" sources."@octokit/auth-token-2.4.5" - sources."@octokit/core-3.4.0" - (sources."@octokit/endpoint-6.0.11" // { + sources."@octokit/core-3.5.1" + (sources."@octokit/endpoint-6.0.12" // { dependencies = [ sources."is-plain-object-5.0.0" ]; }) - sources."@octokit/graphql-4.6.2" - sources."@octokit/openapi-types-7.2.3" + sources."@octokit/graphql-4.6.4" + sources."@octokit/openapi-types-7.3.2" sources."@octokit/plugin-enterprise-rest-6.0.1" - sources."@octokit/plugin-paginate-rest-2.13.3" - sources."@octokit/plugin-request-log-1.0.3" + sources."@octokit/plugin-paginate-rest-2.13.5" + sources."@octokit/plugin-request-log-1.0.4" sources."@octokit/plugin-rest-endpoint-methods-5.3.1" - (sources."@octokit/request-5.4.15" // { + (sources."@octokit/request-5.6.0" // { dependencies = [ sources."is-plain-object-5.0.0" ]; }) - sources."@octokit/request-error-2.0.5" - sources."@octokit/rest-18.5.5" - sources."@octokit/types-6.16.2" + sources."@octokit/request-error-2.1.0" + sources."@octokit/rest-18.6.0" + sources."@octokit/types-6.16.4" sources."@tootallnate/once-1.1.2" sources."@types/minimatch-3.0.4" sources."@types/minimist-1.2.1" @@ -90493,7 +90753,7 @@ in sources."aws4-1.11.0" sources."balanced-match-1.0.2" sources."bcrypt-pbkdf-1.0.2" - sources."before-after-hook-2.2.1" + sources."before-after-hook-2.2.2" sources."brace-expansion-1.1.11" sources."braces-3.0.2" sources."buffer-from-1.1.1" @@ -90534,7 +90794,7 @@ in }) sources."concat-map-0.0.1" sources."concat-stream-2.0.0" - sources."config-chain-1.1.12" + sources."config-chain-1.1.13" sources."console-control-strings-1.1.0" sources."conventional-changelog-angular-5.0.12" (sources."conventional-changelog-core-4.2.2" // { @@ -90591,7 +90851,7 @@ in sources."escalade-3.1.1" sources."escape-string-regexp-1.0.5" sources."eventemitter3-4.0.7" - sources."execa-5.0.1" + sources."execa-5.1.1" sources."extend-3.0.2" (sources."external-editor-3.1.0" // { dependencies = [ @@ -90668,7 +90928,7 @@ in sources."gitconfiglocal-1.0.0" sources."glob-7.1.7" sources."glob-parent-5.1.2" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."graceful-fs-4.2.6" sources."handlebars-4.7.7" sources."har-schema-2.0.0" @@ -90756,8 +91016,8 @@ in sources."jsonparse-1.3.1" sources."jsprim-1.4.1" sources."kind-of-6.0.3" - sources."libnpmaccess-4.0.2" - (sources."libnpmpublish-4.0.1" // { + sources."libnpmaccess-4.0.3" + (sources."libnpmpublish-4.0.2" // { dependencies = [ sources."normalize-package-data-3.0.2" ]; @@ -90781,7 +91041,7 @@ in sources."semver-5.7.1" ]; }) - sources."make-fetch-happen-8.0.14" + sources."make-fetch-happen-9.0.3" sources."map-obj-4.2.1" (sources."meow-8.1.2" // { dependencies = [ @@ -90805,8 +91065,8 @@ in sources."merge-stream-2.0.0" sources."merge2-1.4.1" sources."micromatch-4.0.4" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."min-indent-1.0.1" sources."minimatch-3.0.4" @@ -90830,6 +91090,7 @@ in sources."ms-2.1.2" sources."multimatch-5.0.0" sources."mute-stream-0.0.8" + sources."negotiator-0.6.2" sources."neo-async-2.6.2" sources."node-fetch-2.6.1" sources."node-gyp-7.1.2" @@ -90840,7 +91101,7 @@ in sources."semver-5.7.1" ]; }) - sources."normalize-url-3.3.0" + sources."normalize-url-6.1.0" sources."npm-bundled-1.1.2" sources."npm-install-checks-4.0.0" (sources."npm-lifecycle-3.1.5" // { @@ -90861,10 +91122,10 @@ in ]; }) sources."npm-normalize-package-bin-1.0.1" - sources."npm-package-arg-8.1.2" + sources."npm-package-arg-8.1.5" sources."npm-packlist-2.2.2" sources."npm-pick-manifest-6.1.1" - sources."npm-registry-fetch-10.1.2" + sources."npm-registry-fetch-11.0.0" sources."npm-run-path-4.0.1" sources."npmlog-4.1.2" sources."number-is-nan-1.0.1" @@ -90890,7 +91151,7 @@ in sources."p-timeout-3.2.0" sources."p-try-2.2.0" sources."p-waterfall-2.1.1" - sources."pacote-11.3.3" + sources."pacote-11.3.4" sources."parent-module-1.0.1" sources."parse-github-repo-url-1.4.1" sources."parse-json-5.2.0" @@ -90899,7 +91160,7 @@ in sources."qs-6.10.1" ]; }) - sources."parse-url-5.0.2" + sources."parse-url-5.0.3" sources."path-exists-4.0.0" sources."path-is-absolute-1.0.1" sources."path-key-3.1.1" @@ -90979,7 +91240,7 @@ in sources."slide-1.1.6" sources."smart-buffer-4.1.0" sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."sort-keys-2.0.0" sources."source-map-0.6.1" sources."spdx-correct-3.1.1" @@ -91030,7 +91291,7 @@ in sources."type-fest-0.4.1" sources."typedarray-0.0.6" sources."typedarray-to-buffer-3.1.5" - sources."uglify-js-3.13.8" + sources."uglify-js-3.13.9" sources."uid-number-0.0.6" sources."umask-1.1.0" sources."unbox-primitive-1.0.1" @@ -91048,7 +91309,7 @@ in sources."verror-1.10.0" sources."wcwidth-1.0.1" sources."webidl-conversions-6.1.0" - sources."whatwg-url-8.5.0" + sources."whatwg-url-8.6.0" sources."which-2.0.2" sources."which-boxed-primitive-1.0.2" (sources."wide-align-1.1.3" // { @@ -91088,7 +91349,7 @@ in sources."yallist-4.0.0" sources."yaml-1.10.2" sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -91326,8 +91587,8 @@ in sources."map-visit-1.0.0" sources."micromatch-3.1.10" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mixin-deep-1.3.2" sources."morgan-1.10.0" sources."ms-2.0.0" @@ -91723,8 +91984,8 @@ in sources."methods-1.1.2" sources."micromatch-2.3.11" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimist-1.2.5" (sources."mixin-deep-1.3.2" // { dependencies = [ @@ -91997,61 +92258,61 @@ in version = "1.10.1"; src = ../interpreters/clojurescript/lumo; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" - sources."@babel/core-7.14.3" - sources."@babel/generator-7.14.3" - sources."@babel/helper-annotate-as-pure-7.12.13" - sources."@babel/helper-builder-binary-assignment-operator-visitor-7.12.13" - sources."@babel/helper-compilation-targets-7.14.4" - sources."@babel/helper-create-class-features-plugin-7.14.4" - sources."@babel/helper-create-regexp-features-plugin-7.14.3" + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" + sources."@babel/core-7.14.6" + sources."@babel/generator-7.14.5" + sources."@babel/helper-annotate-as-pure-7.14.5" + sources."@babel/helper-builder-binary-assignment-operator-visitor-7.14.5" + sources."@babel/helper-compilation-targets-7.14.5" + sources."@babel/helper-create-class-features-plugin-7.14.6" + sources."@babel/helper-create-regexp-features-plugin-7.14.5" sources."@babel/helper-define-polyfill-provider-0.2.3" - sources."@babel/helper-explode-assignable-expression-7.13.0" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-hoist-variables-7.13.16" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-plugin-utils-7.13.0" - sources."@babel/helper-remap-async-to-generator-7.13.0" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-skip-transparent-expression-wrappers-7.12.1" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helper-wrap-function-7.13.0" - sources."@babel/helpers-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-explode-assignable-expression-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-plugin-utils-7.14.5" + sources."@babel/helper-remap-async-to-generator-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-skip-transparent-expression-wrappers-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helper-wrap-function-7.14.5" + sources."@babel/helpers-7.14.6" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" ]; }) - sources."@babel/parser-7.14.4" - sources."@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining-7.13.12" + sources."@babel/parser-7.14.7" + sources."@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining-7.14.5" sources."@babel/plugin-external-helpers-7.8.3" - sources."@babel/plugin-proposal-async-generator-functions-7.14.2" - sources."@babel/plugin-proposal-class-properties-7.13.0" - sources."@babel/plugin-proposal-class-static-block-7.14.3" - sources."@babel/plugin-proposal-dynamic-import-7.14.2" - sources."@babel/plugin-proposal-export-namespace-from-7.14.2" - sources."@babel/plugin-proposal-json-strings-7.14.2" - sources."@babel/plugin-proposal-logical-assignment-operators-7.14.2" - sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.2" - sources."@babel/plugin-proposal-numeric-separator-7.14.2" - sources."@babel/plugin-proposal-object-rest-spread-7.14.4" - sources."@babel/plugin-proposal-optional-catch-binding-7.14.2" - sources."@babel/plugin-proposal-optional-chaining-7.14.2" - sources."@babel/plugin-proposal-private-methods-7.13.0" - sources."@babel/plugin-proposal-private-property-in-object-7.14.0" - sources."@babel/plugin-proposal-unicode-property-regex-7.12.13" + sources."@babel/plugin-proposal-async-generator-functions-7.14.7" + sources."@babel/plugin-proposal-class-properties-7.14.5" + sources."@babel/plugin-proposal-class-static-block-7.14.5" + sources."@babel/plugin-proposal-dynamic-import-7.14.5" + sources."@babel/plugin-proposal-export-namespace-from-7.14.5" + sources."@babel/plugin-proposal-json-strings-7.14.5" + sources."@babel/plugin-proposal-logical-assignment-operators-7.14.5" + sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.5" + sources."@babel/plugin-proposal-numeric-separator-7.14.5" + sources."@babel/plugin-proposal-object-rest-spread-7.14.7" + sources."@babel/plugin-proposal-optional-catch-binding-7.14.5" + sources."@babel/plugin-proposal-optional-chaining-7.14.5" + sources."@babel/plugin-proposal-private-methods-7.14.5" + sources."@babel/plugin-proposal-private-property-in-object-7.14.5" + sources."@babel/plugin-proposal-unicode-property-regex-7.14.5" sources."@babel/plugin-syntax-async-generators-7.8.4" sources."@babel/plugin-syntax-bigint-7.8.3" sources."@babel/plugin-syntax-class-properties-7.12.13" - sources."@babel/plugin-syntax-class-static-block-7.12.13" + sources."@babel/plugin-syntax-class-static-block-7.14.5" sources."@babel/plugin-syntax-dynamic-import-7.8.3" sources."@babel/plugin-syntax-export-namespace-from-7.8.3" sources."@babel/plugin-syntax-import-meta-7.10.4" @@ -92062,48 +92323,48 @@ in sources."@babel/plugin-syntax-object-rest-spread-7.8.3" sources."@babel/plugin-syntax-optional-catch-binding-7.8.3" sources."@babel/plugin-syntax-optional-chaining-7.8.3" - sources."@babel/plugin-syntax-private-property-in-object-7.14.0" - sources."@babel/plugin-syntax-top-level-await-7.12.13" - sources."@babel/plugin-transform-arrow-functions-7.13.0" - sources."@babel/plugin-transform-async-to-generator-7.13.0" - sources."@babel/plugin-transform-block-scoped-functions-7.12.13" - sources."@babel/plugin-transform-block-scoping-7.14.4" - sources."@babel/plugin-transform-classes-7.14.4" - sources."@babel/plugin-transform-computed-properties-7.13.0" - sources."@babel/plugin-transform-destructuring-7.14.4" - sources."@babel/plugin-transform-dotall-regex-7.12.13" - sources."@babel/plugin-transform-duplicate-keys-7.12.13" - sources."@babel/plugin-transform-exponentiation-operator-7.12.13" - sources."@babel/plugin-transform-for-of-7.13.0" - sources."@babel/plugin-transform-function-name-7.12.13" - sources."@babel/plugin-transform-literals-7.12.13" - sources."@babel/plugin-transform-member-expression-literals-7.12.13" - sources."@babel/plugin-transform-modules-amd-7.14.2" - sources."@babel/plugin-transform-modules-commonjs-7.14.0" - sources."@babel/plugin-transform-modules-systemjs-7.13.8" - sources."@babel/plugin-transform-modules-umd-7.14.0" - sources."@babel/plugin-transform-named-capturing-groups-regex-7.12.13" - sources."@babel/plugin-transform-new-target-7.12.13" - sources."@babel/plugin-transform-object-super-7.12.13" - sources."@babel/plugin-transform-parameters-7.14.2" - sources."@babel/plugin-transform-property-literals-7.12.13" - sources."@babel/plugin-transform-regenerator-7.13.15" - sources."@babel/plugin-transform-reserved-words-7.12.13" - sources."@babel/plugin-transform-runtime-7.14.3" - sources."@babel/plugin-transform-shorthand-properties-7.12.13" - sources."@babel/plugin-transform-spread-7.13.0" - sources."@babel/plugin-transform-sticky-regex-7.12.13" - sources."@babel/plugin-transform-template-literals-7.13.0" - sources."@babel/plugin-transform-typeof-symbol-7.12.13" - sources."@babel/plugin-transform-unicode-escapes-7.12.13" - sources."@babel/plugin-transform-unicode-regex-7.12.13" - sources."@babel/preset-env-7.14.4" + sources."@babel/plugin-syntax-private-property-in-object-7.14.5" + sources."@babel/plugin-syntax-top-level-await-7.14.5" + sources."@babel/plugin-transform-arrow-functions-7.14.5" + sources."@babel/plugin-transform-async-to-generator-7.14.5" + sources."@babel/plugin-transform-block-scoped-functions-7.14.5" + sources."@babel/plugin-transform-block-scoping-7.14.5" + sources."@babel/plugin-transform-classes-7.14.5" + sources."@babel/plugin-transform-computed-properties-7.14.5" + sources."@babel/plugin-transform-destructuring-7.14.7" + sources."@babel/plugin-transform-dotall-regex-7.14.5" + sources."@babel/plugin-transform-duplicate-keys-7.14.5" + sources."@babel/plugin-transform-exponentiation-operator-7.14.5" + sources."@babel/plugin-transform-for-of-7.14.5" + sources."@babel/plugin-transform-function-name-7.14.5" + sources."@babel/plugin-transform-literals-7.14.5" + sources."@babel/plugin-transform-member-expression-literals-7.14.5" + sources."@babel/plugin-transform-modules-amd-7.14.5" + sources."@babel/plugin-transform-modules-commonjs-7.14.5" + sources."@babel/plugin-transform-modules-systemjs-7.14.5" + sources."@babel/plugin-transform-modules-umd-7.14.5" + sources."@babel/plugin-transform-named-capturing-groups-regex-7.14.7" + sources."@babel/plugin-transform-new-target-7.14.5" + sources."@babel/plugin-transform-object-super-7.14.5" + sources."@babel/plugin-transform-parameters-7.14.5" + sources."@babel/plugin-transform-property-literals-7.14.5" + sources."@babel/plugin-transform-regenerator-7.14.5" + sources."@babel/plugin-transform-reserved-words-7.14.5" + sources."@babel/plugin-transform-runtime-7.14.5" + sources."@babel/plugin-transform-shorthand-properties-7.14.5" + sources."@babel/plugin-transform-spread-7.14.6" + sources."@babel/plugin-transform-sticky-regex-7.14.5" + sources."@babel/plugin-transform-template-literals-7.14.5" + sources."@babel/plugin-transform-typeof-symbol-7.14.5" + sources."@babel/plugin-transform-unicode-escapes-7.14.5" + sources."@babel/plugin-transform-unicode-regex-7.14.5" + sources."@babel/preset-env-7.14.7" sources."@babel/preset-modules-0.1.4" sources."@babel/preset-stage-2-7.8.3" - sources."@babel/runtime-7.14.0" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/runtime-7.14.6" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" sources."@cnakazawa/watch-1.0.4" sources."@comandeer/babel-plugin-banner-5.0.0" sources."@istanbuljs/load-nyc-config-1.1.0" @@ -92118,13 +92379,13 @@ in sources."@types/babel__generator-7.6.2" sources."@types/babel__template-7.4.0" sources."@types/babel__traverse-7.11.1" - sources."@types/estree-0.0.47" + sources."@types/estree-0.0.48" sources."@types/graceful-fs-4.1.5" sources."@types/istanbul-lib-coverage-2.0.3" sources."@types/istanbul-lib-report-3.0.0" sources."@types/istanbul-reports-1.1.2" sources."@types/json-schema-7.0.7" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/normalize-package-data-2.4.0" sources."@types/resolve-0.0.8" sources."@types/yargs-15.0.13" @@ -92214,7 +92475,7 @@ in sources."babel-plugin-minify-simplify-0.5.1" sources."babel-plugin-minify-type-constructors-0.4.3" sources."babel-plugin-polyfill-corejs2-0.2.2" - sources."babel-plugin-polyfill-corejs3-0.2.2" + sources."babel-plugin-polyfill-corejs3-0.2.3" sources."babel-plugin-polyfill-regenerator-0.2.2" sources."babel-plugin-syntax-flow-6.18.0" sources."babel-plugin-transform-flow-strip-types-6.22.0" @@ -92297,7 +92558,7 @@ in sources."cached-path-relative-1.0.2" sources."call-bind-1.0.2" sources."camelcase-5.3.1" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."capture-exit-2.0.0" sources."caseless-0.12.0" (sources."chalk-3.0.0" // { @@ -92309,7 +92570,7 @@ in sources."supports-color-7.2.0" ]; }) - (sources."chokidar-3.5.1" // { + (sources."chokidar-3.5.2" // { dependencies = [ sources."braces-3.0.2" sources."fill-range-7.0.1" @@ -92361,7 +92622,7 @@ in sources."concat-stream-1.6.2" sources."console-browserify-1.2.0" sources."constants-browserify-1.0.0" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" (sources."copy-concurrently-1.0.5" // { dependencies = [ sources."mkdirp-0.5.5" @@ -92369,7 +92630,7 @@ in }) sources."copy-descriptor-0.1.1" sources."core-js-2.6.12" - (sources."core-js-compat-3.13.1" // { + (sources."core-js-compat-3.15.1" // { dependencies = [ sources."semver-7.0.0" ]; @@ -92421,7 +92682,7 @@ in sources."duplexer2-0.1.4" sources."duplexify-3.7.1" sources."ecc-jsbn-0.1.2" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" (sources."elliptic-6.5.4" // { dependencies = [ sources."bn.js-4.12.0" @@ -92683,8 +92944,8 @@ in sources."bn.js-4.12.0" ]; }) - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimalistic-assert-1.0.1" sources."minimalistic-crypto-utils-1.0.1" sources."minimatch-3.0.4" @@ -92724,7 +92985,7 @@ in ]; }) sources."node-modules-regexp-1.0.0" - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" (sources."normalize-package-data-2.5.0" // { dependencies = [ sources."semver-5.7.1" @@ -92814,7 +93075,7 @@ in sources."string_decoder-1.1.1" ]; }) - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."realpath-native-2.0.0" sources."regenerate-1.4.2" sources."regenerate-unicode-properties-8.2.0" @@ -93276,9 +93537,9 @@ in sources."link-check-4.5.4" sources."lodash-4.17.21" sources."markdown-link-extractor-1.3.0" - sources."marked-2.0.6" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."marked-2.1.2" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."ms-2.1.3" sources."oauth-sign-0.9.0" sources."performance-now-2.1.0" @@ -93311,10 +93572,10 @@ in mastodon-bot = nodeEnv.buildNodePackage { name = "mastodon-bot"; packageName = "mastodon-bot"; - version = "1.10.12-20210326145549"; + version = "1.12.1-20210623060235"; src = fetchurl { - url = "https://registry.npmjs.org/mastodon-bot/-/mastodon-bot-1.10.12-20210326145549.tgz"; - sha512 = "buuQt4rao3Vsq0og+WM8vrcVdD1vy1jhh8Vj6CynGuZ2BSY8fcyJKlPLkd3IK5xIJe3h+Iqnfx364eqmjwpw/Q=="; + url = "https://registry.npmjs.org/mastodon-bot/-/mastodon-bot-1.12.1-20210623060235.tgz"; + sha512 = "eXao5YnfoIQ4hqVmzCN2HT6GXfgYuReCPNlDz54Yn8YtUxwdhQZ9KnQo9t0ex4Bl6rrAZ0Po8GuVIzTVn22o4Q=="; }; dependencies = [ sources."acorn-5.7.4" @@ -93497,8 +93758,8 @@ in sources."lodash.templatesettings-3.1.1" sources."mastodon-api-1.3.0" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."minimist-1.2.5" sources."mkdirp-0.5.5" @@ -93508,6 +93769,7 @@ in sources."natural-compare-1.4.0" sources."next-tick-1.0.0" sources."node-addon-api-1.7.2" + sources."node-fetch-2.6.1" sources."number-is-nan-1.0.1" sources."oauth-0.9.15" sources."oauth-sign-0.9.0" @@ -93606,10 +93868,10 @@ in mathjax = nodeEnv.buildNodePackage { name = "mathjax"; packageName = "mathjax"; - version = "3.1.4"; + version = "3.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/mathjax/-/mathjax-3.1.4.tgz"; - sha512 = "Okmc+F3l7vRWNMALbH0HMMoTJWVn1cbeDbybHppCeophIGdFS+xxD/OffYpZirUOHzesZostpzEwsLSst+4W8w=="; + url = "https://registry.npmjs.org/mathjax/-/mathjax-3.2.0.tgz"; + sha512 = "PL+rdYRK4Wxif+SQ94zP/L0sv6/oW/1WdQiIx0Jvn9FZaU5W9E6nlIv8liYAXBNPL2Fw/i+o/mZ1212eSzn0Cw=="; }; buildInputs = globalBuildInputs; meta = { @@ -93661,14 +93923,14 @@ in "@mermaid-js/mermaid-cli" = nodeEnv.buildNodePackage { name = "_at_mermaid-js_slash_mermaid-cli"; packageName = "@mermaid-js/mermaid-cli"; - version = "8.10.1"; + version = "8.10.2"; src = fetchurl { - url = "https://registry.npmjs.org/@mermaid-js/mermaid-cli/-/mermaid-cli-8.10.1.tgz"; - sha512 = "X2wIJwN22Hwh5zkpGteKg31K+wYCO8W5NUsQYlnSWyv8RpHoZfK7+kDVRzvHvVqnizTM3D+KgSnONvh+Z0EB6g=="; + url = "https://registry.npmjs.org/@mermaid-js/mermaid-cli/-/mermaid-cli-8.10.2.tgz"; + sha512 = "aoGVAZC/goUc6iWYef5aRjCwITojjWvlEj+qPHCEbAGisR4md3fi3+3iDD3ra+zhagfXJZ1Qyo5+3lVkJPaC6Q=="; }; dependencies = [ sources."@braintree/sanitize-url-3.1.0" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/yauzl-2.9.1" sources."agent-base-6.0.2" sources."ansi-styles-4.3.0" @@ -93685,7 +93947,7 @@ in sources."clean-css-4.2.3" sources."color-convert-2.0.1" sources."color-name-1.1.4" - sources."commander-6.2.1" + sources."commander-7.2.0" sources."concat-map-0.0.1" sources."css-b64-images-0.2.5" sources."d3-5.16.0" @@ -93726,8 +93988,8 @@ in sources."d3-zoom-1.8.3" sources."dagre-0.8.5" sources."dagre-d3-0.6.4" - sources."debug-4.3.2" - sources."devtools-protocol-0.0.869402" + sources."debug-4.3.1" + sources."devtools-protocol-0.0.883894" sources."end-of-stream-1.4.4" sources."entity-decode-2.0.2" sources."extract-zip-2.0.1" @@ -93754,10 +94016,11 @@ in sources."locate-path-5.0.0" sources."lodash-4.17.21" sources."lower-case-1.1.4" - sources."mermaid-8.10.1" + sources."mermaid-8.10.2" sources."minify-4.1.3" sources."minimatch-3.0.4" - sources."mkdirp-classic-0.5.3" + sources."minimist-1.2.5" + sources."mkdirp-0.5.5" sources."moment-mini-2.24.0" sources."ms-2.1.2" sources."no-case-2.3.2" @@ -93771,10 +94034,10 @@ in sources."path-is-absolute-1.0.1" sources."pend-1.2.0" sources."pkg-dir-4.2.0" - sources."progress-2.0.3" + sources."progress-2.0.1" sources."proxy-from-env-1.1.0" sources."pump-3.0.0" - sources."puppeteer-9.1.1" + sources."puppeteer-10.0.0" sources."readable-stream-3.6.0" sources."relateurl-0.2.7" sources."rimraf-3.0.2" @@ -93786,7 +94049,7 @@ in sources."string_decoder-1.3.0" sources."stylis-3.5.4" sources."supports-color-7.2.0" - sources."tar-fs-2.1.1" + sources."tar-fs-2.0.0" sources."tar-stream-2.2.0" (sources."terser-4.8.0" // { dependencies = [ @@ -93796,8 +94059,8 @@ in sources."through-2.3.8" sources."try-catch-2.0.1" sources."try-to-catch-1.1.1" - sources."uglify-js-3.13.8" - sources."unbzip2-stream-1.4.3" + sources."uglify-js-3.13.9" + sources."unbzip2-stream-1.3.3" sources."upper-case-1.1.3" sources."util-deprecate-1.0.2" sources."wrappy-1.0.2" @@ -93826,11 +94089,11 @@ in sources."@fluentui/date-time-utilities-7.9.1" sources."@fluentui/dom-utilities-1.1.2" sources."@fluentui/keyboard-key-0.2.17" - sources."@fluentui/react-7.170.1" + sources."@fluentui/react-7.172.1" sources."@fluentui/react-focus-7.17.6" sources."@fluentui/react-window-provider-1.0.2" sources."@fluentui/theme-1.7.4" - sources."@microsoft/load-themed-styles-1.10.174" + sources."@microsoft/load-themed-styles-1.10.185" sources."@sindresorhus/is-0.14.0" sources."@szmarczak/http-timer-1.1.2" sources."@uifabric/foundation-7.9.26" @@ -93948,8 +94211,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -93966,7 +94229,7 @@ in sources."node-fetch-1.6.3" sources."normalize-url-4.5.1" sources."object-assign-4.1.1" - sources."office-ui-fabric-react-7.170.1" + sources."office-ui-fabric-react-7.172.1" sources."on-finished-2.3.0" sources."on-headers-1.0.2" sources."once-1.4.0" @@ -94057,8 +94320,8 @@ in sources."strip-json-comments-2.0.1" sources."supports-color-2.0.0" sources."swagger-schema-official-2.0.0-bab6bed" - sources."swagger-ui-dist-3.49.0" - sources."tail-2.2.2" + sources."swagger-ui-dist-3.50.0" + sources."tail-2.2.3" sources."through-2.3.8" sources."tmp-0.0.33" sources."to-readable-stream-1.0.0" @@ -94089,10 +94352,10 @@ in mocha = nodeEnv.buildNodePackage { name = "mocha"; packageName = "mocha"; - version = "8.4.0"; + version = "9.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/mocha/-/mocha-8.4.0.tgz"; - sha512 = "hJaO0mwDXmZS4ghXsvPVriOhsxQ7ofcpQdm8dE+jISUOKopitvnXFQmpRR7jd2K6VBG6E26gU3IAbXXGIbu4sQ=="; + url = "https://registry.npmjs.org/mocha/-/mocha-9.0.1.tgz"; + sha512 = "9zwsavlRO+5csZu6iRtl3GHImAbhERoDsZwdRkdJ/bE+eVplmoxNKE901ZJ9LdSchYBjSCPbjKc5XvcAri2ylw=="; }; dependencies = [ sources."@ungap/promise-all-settled-1.1.2" @@ -94140,7 +94403,7 @@ in sources."fs.realpath-1.0.0" sources."fsevents-2.3.2" sources."get-caller-file-2.0.5" - sources."glob-7.1.6" + sources."glob-7.1.7" sources."glob-parent-5.1.2" sources."growl-1.10.5" sources."has-flag-4.0.0" @@ -94153,13 +94416,14 @@ in sources."is-glob-4.0.1" sources."is-number-7.0.0" sources."is-plain-obj-2.1.0" + sources."is-unicode-supported-0.1.0" sources."isexe-2.0.0" - sources."js-yaml-4.0.0" + sources."js-yaml-4.1.0" sources."locate-path-6.0.0" - sources."log-symbols-4.0.0" + sources."log-symbols-4.1.0" sources."minimatch-3.0.4" sources."ms-2.1.3" - sources."nanoid-3.1.20" + sources."nanoid-3.1.23" sources."normalize-path-3.0.0" sources."once-1.4.0" sources."p-limit-3.1.0" @@ -94179,7 +94443,7 @@ in sources."to-regex-range-5.0.1" sources."which-2.0.2" sources."wide-align-1.1.3" - sources."workerpool-6.1.0" + sources."workerpool-6.1.4" (sources."wrap-ansi-7.0.0" // { dependencies = [ sources."ansi-regex-5.0.0" @@ -94251,8 +94515,8 @@ in sources."lodash-4.17.21" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."ms-2.1.3" sources."native-promise-only-0.8.1" sources."object-inspect-1.10.3" @@ -94342,53 +94606,53 @@ in netlify-cli = nodeEnv.buildNodePackage { name = "netlify-cli"; packageName = "netlify-cli"; - version = "3.32.6"; + version = "3.38.7"; src = fetchurl { - url = "https://registry.npmjs.org/netlify-cli/-/netlify-cli-3.32.6.tgz"; - sha512 = "VG2b3SJHbAIVErZvaeD0cU496GnuHpBqUYJiMrtEJ3eaPSQGc6HHZz9/P0Zbl7S67jaOk/wANOfcSxtbmPEORQ=="; + url = "https://registry.npmjs.org/netlify-cli/-/netlify-cli-3.38.7.tgz"; + sha512 = "q95l1GhUbv1VgePfCHuNREvmGO7dN9H+kSw5esaxNITa/+67xXP4PA2dzJaylTXciEF3NdIhTdXCC9j/CUs4EQ=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" - (sources."@babel/core-7.14.3" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" + (sources."@babel/core-7.14.6" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/generator-7.14.3" - sources."@babel/helper-annotate-as-pure-7.12.13" - sources."@babel/helper-builder-binary-assignment-operator-visitor-7.12.13" - (sources."@babel/helper-compilation-targets-7.14.4" // { + sources."@babel/generator-7.14.5" + sources."@babel/helper-annotate-as-pure-7.14.5" + sources."@babel/helper-builder-binary-assignment-operator-visitor-7.14.5" + (sources."@babel/helper-compilation-targets-7.14.5" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/helper-create-class-features-plugin-7.14.4" - sources."@babel/helper-create-regexp-features-plugin-7.14.3" + sources."@babel/helper-create-class-features-plugin-7.14.6" + sources."@babel/helper-create-regexp-features-plugin-7.14.5" (sources."@babel/helper-define-polyfill-provider-0.2.3" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/helper-explode-assignable-expression-7.13.0" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-hoist-variables-7.13.16" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-plugin-utils-7.13.0" - sources."@babel/helper-remap-async-to-generator-7.13.0" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-skip-transparent-expression-wrappers-7.12.1" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helper-wrap-function-7.13.0" - sources."@babel/helpers-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-explode-assignable-expression-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-plugin-utils-7.14.5" + sources."@babel/helper-remap-async-to-generator-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-skip-transparent-expression-wrappers-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helper-wrap-function-7.14.5" + sources."@babel/helpers-7.14.6" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."ansi-styles-3.2.1" sources."chalk-2.4.2" @@ -94397,26 +94661,26 @@ in sources."supports-color-5.5.0" ]; }) - sources."@babel/parser-7.14.4" - sources."@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining-7.13.12" - sources."@babel/plugin-proposal-async-generator-functions-7.14.2" - sources."@babel/plugin-proposal-class-properties-7.13.0" - sources."@babel/plugin-proposal-class-static-block-7.14.3" - sources."@babel/plugin-proposal-dynamic-import-7.14.2" - sources."@babel/plugin-proposal-export-namespace-from-7.14.2" - sources."@babel/plugin-proposal-json-strings-7.14.2" - sources."@babel/plugin-proposal-logical-assignment-operators-7.14.2" - sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.2" - sources."@babel/plugin-proposal-numeric-separator-7.14.2" - sources."@babel/plugin-proposal-object-rest-spread-7.14.4" - sources."@babel/plugin-proposal-optional-catch-binding-7.14.2" - sources."@babel/plugin-proposal-optional-chaining-7.14.2" - sources."@babel/plugin-proposal-private-methods-7.13.0" - sources."@babel/plugin-proposal-private-property-in-object-7.14.0" - sources."@babel/plugin-proposal-unicode-property-regex-7.12.13" + sources."@babel/parser-7.14.7" + sources."@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining-7.14.5" + sources."@babel/plugin-proposal-async-generator-functions-7.14.7" + sources."@babel/plugin-proposal-class-properties-7.14.5" + sources."@babel/plugin-proposal-class-static-block-7.14.5" + sources."@babel/plugin-proposal-dynamic-import-7.14.5" + sources."@babel/plugin-proposal-export-namespace-from-7.14.5" + sources."@babel/plugin-proposal-json-strings-7.14.5" + sources."@babel/plugin-proposal-logical-assignment-operators-7.14.5" + sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.5" + sources."@babel/plugin-proposal-numeric-separator-7.14.5" + sources."@babel/plugin-proposal-object-rest-spread-7.14.7" + sources."@babel/plugin-proposal-optional-catch-binding-7.14.5" + sources."@babel/plugin-proposal-optional-chaining-7.14.5" + sources."@babel/plugin-proposal-private-methods-7.14.5" + sources."@babel/plugin-proposal-private-property-in-object-7.14.5" + sources."@babel/plugin-proposal-unicode-property-regex-7.14.5" sources."@babel/plugin-syntax-async-generators-7.8.4" sources."@babel/plugin-syntax-class-properties-7.12.13" - sources."@babel/plugin-syntax-class-static-block-7.12.13" + sources."@babel/plugin-syntax-class-static-block-7.14.5" sources."@babel/plugin-syntax-dynamic-import-7.8.3" sources."@babel/plugin-syntax-export-namespace-from-7.8.3" sources."@babel/plugin-syntax-json-strings-7.8.3" @@ -94426,50 +94690,50 @@ in sources."@babel/plugin-syntax-object-rest-spread-7.8.3" sources."@babel/plugin-syntax-optional-catch-binding-7.8.3" sources."@babel/plugin-syntax-optional-chaining-7.8.3" - sources."@babel/plugin-syntax-private-property-in-object-7.14.0" - sources."@babel/plugin-syntax-top-level-await-7.12.13" - sources."@babel/plugin-transform-arrow-functions-7.13.0" - sources."@babel/plugin-transform-async-to-generator-7.13.0" - sources."@babel/plugin-transform-block-scoped-functions-7.12.13" - sources."@babel/plugin-transform-block-scoping-7.14.4" - sources."@babel/plugin-transform-classes-7.14.4" - sources."@babel/plugin-transform-computed-properties-7.13.0" - sources."@babel/plugin-transform-destructuring-7.14.4" - sources."@babel/plugin-transform-dotall-regex-7.12.13" - sources."@babel/plugin-transform-duplicate-keys-7.12.13" - sources."@babel/plugin-transform-exponentiation-operator-7.12.13" - sources."@babel/plugin-transform-for-of-7.13.0" - sources."@babel/plugin-transform-function-name-7.12.13" - sources."@babel/plugin-transform-literals-7.12.13" - sources."@babel/plugin-transform-member-expression-literals-7.12.13" - sources."@babel/plugin-transform-modules-amd-7.14.2" - sources."@babel/plugin-transform-modules-commonjs-7.14.0" - sources."@babel/plugin-transform-modules-systemjs-7.13.8" - sources."@babel/plugin-transform-modules-umd-7.14.0" - sources."@babel/plugin-transform-named-capturing-groups-regex-7.12.13" - sources."@babel/plugin-transform-new-target-7.12.13" - sources."@babel/plugin-transform-object-super-7.12.13" - sources."@babel/plugin-transform-parameters-7.14.2" - sources."@babel/plugin-transform-property-literals-7.12.13" - sources."@babel/plugin-transform-regenerator-7.13.15" - sources."@babel/plugin-transform-reserved-words-7.12.13" - sources."@babel/plugin-transform-shorthand-properties-7.12.13" - sources."@babel/plugin-transform-spread-7.13.0" - sources."@babel/plugin-transform-sticky-regex-7.12.13" - sources."@babel/plugin-transform-template-literals-7.13.0" - sources."@babel/plugin-transform-typeof-symbol-7.12.13" - sources."@babel/plugin-transform-unicode-escapes-7.12.13" - sources."@babel/plugin-transform-unicode-regex-7.12.13" - (sources."@babel/preset-env-7.14.4" // { + sources."@babel/plugin-syntax-private-property-in-object-7.14.5" + sources."@babel/plugin-syntax-top-level-await-7.14.5" + sources."@babel/plugin-transform-arrow-functions-7.14.5" + sources."@babel/plugin-transform-async-to-generator-7.14.5" + sources."@babel/plugin-transform-block-scoped-functions-7.14.5" + sources."@babel/plugin-transform-block-scoping-7.14.5" + sources."@babel/plugin-transform-classes-7.14.5" + sources."@babel/plugin-transform-computed-properties-7.14.5" + sources."@babel/plugin-transform-destructuring-7.14.7" + sources."@babel/plugin-transform-dotall-regex-7.14.5" + sources."@babel/plugin-transform-duplicate-keys-7.14.5" + sources."@babel/plugin-transform-exponentiation-operator-7.14.5" + sources."@babel/plugin-transform-for-of-7.14.5" + sources."@babel/plugin-transform-function-name-7.14.5" + sources."@babel/plugin-transform-literals-7.14.5" + sources."@babel/plugin-transform-member-expression-literals-7.14.5" + sources."@babel/plugin-transform-modules-amd-7.14.5" + sources."@babel/plugin-transform-modules-commonjs-7.14.5" + sources."@babel/plugin-transform-modules-systemjs-7.14.5" + sources."@babel/plugin-transform-modules-umd-7.14.5" + sources."@babel/plugin-transform-named-capturing-groups-regex-7.14.7" + sources."@babel/plugin-transform-new-target-7.14.5" + sources."@babel/plugin-transform-object-super-7.14.5" + sources."@babel/plugin-transform-parameters-7.14.5" + sources."@babel/plugin-transform-property-literals-7.14.5" + sources."@babel/plugin-transform-regenerator-7.14.5" + sources."@babel/plugin-transform-reserved-words-7.14.5" + sources."@babel/plugin-transform-shorthand-properties-7.14.5" + sources."@babel/plugin-transform-spread-7.14.6" + sources."@babel/plugin-transform-sticky-regex-7.14.5" + sources."@babel/plugin-transform-template-literals-7.14.5" + sources."@babel/plugin-transform-typeof-symbol-7.14.5" + sources."@babel/plugin-transform-unicode-escapes-7.14.5" + sources."@babel/plugin-transform-unicode-regex-7.14.5" + (sources."@babel/preset-env-7.14.7" // { dependencies = [ sources."semver-6.3.0" ]; }) sources."@babel/preset-modules-0.1.4" - sources."@babel/runtime-7.14.0" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/runtime-7.14.6" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" sources."@bugsnag/browser-7.10.1" sources."@bugsnag/core-7.10.0" sources."@bugsnag/cuid-3.0.0" @@ -94479,13 +94743,28 @@ in sources."@dabh/diagnostics-2.0.2" sources."@jest/types-24.9.0" sources."@mrmlnc/readdir-enhanced-2.2.1" - (sources."@netlify/build-11.29.2" // { + (sources."@netlify/build-12.7.2" // { dependencies = [ + sources."@netlify/config-7.7.1" + (sources."@netlify/zip-it-and-ship-it-4.4.2" // { + dependencies = [ + sources."find-up-5.0.0" + sources."locate-path-6.0.0" + sources."p-locate-5.0.0" + sources."pkg-dir-5.0.0" + sources."semver-7.3.5" + sources."yargs-16.2.0" + ]; + }) sources."ansi-styles-4.3.0" sources."chalk-3.0.0" + sources."cp-file-9.1.0" + sources."dot-prop-5.3.0" sources."execa-3.4.0" + sources."find-up-4.1.0" sources."is-plain-obj-2.1.0" sources."locate-path-5.0.0" + sources."netlify-redirect-parser-7.0.0" sources."resolve-2.0.0-next.3" sources."semver-6.3.0" sources."update-notifier-4.1.3" @@ -94493,26 +94772,38 @@ in }) (sources."@netlify/cache-utils-1.0.7" // { dependencies = [ + sources."del-5.1.0" sources."locate-path-5.0.0" + sources."p-map-3.0.0" + sources."slash-3.0.0" ]; }) - (sources."@netlify/config-6.7.1" // { + (sources."@netlify/config-8.0.0" // { dependencies = [ sources."ansi-styles-4.3.0" sources."chalk-3.0.0" + sources."dot-prop-5.3.0" sources."execa-3.4.0" sources."find-up-4.1.0" sources."is-plain-obj-2.1.0" sources."locate-path-5.0.0" ]; }) - (sources."@netlify/framework-info-5.1.2" // { + sources."@netlify/esbuild-0.13.6" + (sources."@netlify/framework-info-5.3.0" // { dependencies = [ - sources."p-limit-3.1.0" sources."p-locate-5.0.0" ]; }) - sources."@netlify/functions-utils-1.3.37" + (sources."@netlify/functions-utils-1.3.46" // { + dependencies = [ + sources."@netlify/zip-it-and-ship-it-4.4.2" + sources."cp-file-9.1.0" + sources."pkg-dir-5.0.0" + sources."resolve-2.0.0-next.3" + sources."yargs-16.2.0" + ]; + }) (sources."@netlify/git-utils-1.0.11" // { dependencies = [ sources."braces-3.0.2" @@ -94523,68 +94814,35 @@ in sources."to-regex-range-5.0.1" ]; }) - sources."@netlify/open-api-2.4.0" - (sources."@netlify/plugin-edge-handlers-1.11.13" // { + sources."@netlify/open-api-2.5.0" + (sources."@netlify/plugin-edge-handlers-1.11.19" // { dependencies = [ - sources."@nodelib/fs.stat-2.0.4" - sources."@types/node-14.17.1" - sources."array-union-2.1.0" - sources."braces-3.0.2" - sources."del-6.0.0" - sources."dir-glob-3.0.1" - sources."fast-glob-3.2.5" - sources."fill-range-7.0.1" - sources."glob-parent-5.1.2" - sources."globby-11.0.3" - sources."ignore-5.1.8" - sources."is-number-7.0.0" - sources."micromatch-4.0.4" - sources."slash-3.0.0" - sources."to-regex-range-5.0.1" + sources."@types/node-14.17.4" + sources."typescript-4.3.4" ]; }) - sources."@netlify/plugins-list-2.14.2" + sources."@netlify/plugins-list-2.18.0" + sources."@netlify/routing-local-proxy-0.30.1" (sources."@netlify/run-utils-1.0.7" // { dependencies = [ sources."execa-3.4.0" ]; }) - sources."@netlify/traffic-mesh-agent-0.27.10" - sources."@netlify/traffic-mesh-agent-darwin-x64-0.27.10" - sources."@netlify/traffic-mesh-agent-linux-x64-0.27.10" - sources."@netlify/traffic-mesh-agent-win32-x64-0.27.10" - (sources."@netlify/zip-it-and-ship-it-4.2.5" // { + (sources."@netlify/zip-it-and-ship-it-4.5.1" // { dependencies = [ - sources."@nodelib/fs.stat-2.0.4" - sources."array-union-2.1.0" - sources."braces-3.0.2" - sources."cliui-7.0.4" - sources."cp-file-9.0.0" - sources."del-6.0.0" - sources."dir-glob-3.0.1" - sources."fast-glob-3.2.5" - sources."fill-range-7.0.1" - sources."glob-parent-5.1.2" - sources."globby-11.0.3" - sources."ignore-5.1.8" - sources."is-number-7.0.0" - sources."micromatch-4.0.4" + sources."cp-file-9.1.0" sources."pkg-dir-5.0.0" sources."resolve-2.0.0-next.3" - sources."slash-3.0.0" - sources."to-regex-range-5.0.1" - sources."y18n-5.0.8" sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" ]; }) - (sources."@nodelib/fs.scandir-2.1.4" // { + (sources."@nodelib/fs.scandir-2.1.5" // { dependencies = [ - sources."@nodelib/fs.stat-2.0.4" + sources."@nodelib/fs.stat-2.0.5" ]; }) sources."@nodelib/fs.stat-1.1.3" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.walk-1.2.7" (sources."@oclif/color-0.1.2" // { dependencies = [ sources."ansi-styles-3.2.1" @@ -94610,20 +94868,20 @@ in sources."@oclif/command-1.8.0" (sources."@oclif/config-1.17.0" // { dependencies = [ - sources."@nodelib/fs.stat-2.0.4" + sources."@nodelib/fs.stat-2.0.5" sources."array-union-2.1.0" sources."braces-3.0.2" sources."dir-glob-3.0.1" sources."fast-glob-3.2.5" sources."fill-range-7.0.1" sources."glob-parent-5.1.2" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."ignore-5.1.8" sources."is-number-7.0.0" sources."micromatch-4.0.4" sources."slash-3.0.0" sources."to-regex-range-5.0.1" - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) (sources."@oclif/errors-1.3.4" // { @@ -94677,31 +94935,31 @@ in dependencies = [ sources."fs-extra-9.1.0" sources."jsonfile-6.1.0" - sources."tslib-2.2.0" + sources."tslib-2.3.0" sources."universalify-2.0.0" ]; }) sources."@oclif/screen-1.0.4" sources."@octokit/auth-token-2.4.5" - sources."@octokit/core-3.4.0" - (sources."@octokit/endpoint-6.0.11" // { + sources."@octokit/core-3.5.1" + (sources."@octokit/endpoint-6.0.12" // { dependencies = [ sources."is-plain-object-5.0.0" ]; }) - sources."@octokit/graphql-4.6.2" - sources."@octokit/openapi-types-7.2.3" - sources."@octokit/plugin-paginate-rest-2.13.3" - sources."@octokit/plugin-request-log-1.0.3" + sources."@octokit/graphql-4.6.4" + sources."@octokit/openapi-types-7.3.2" + sources."@octokit/plugin-paginate-rest-2.13.5" + sources."@octokit/plugin-request-log-1.0.4" sources."@octokit/plugin-rest-endpoint-methods-5.3.1" - (sources."@octokit/request-5.4.15" // { + (sources."@octokit/request-5.6.0" // { dependencies = [ sources."is-plain-object-5.0.0" ]; }) - sources."@octokit/request-error-2.0.5" - sources."@octokit/rest-18.5.5" - sources."@octokit/types-6.16.2" + sources."@octokit/request-error-2.1.0" + sources."@octokit/rest-18.6.0" + sources."@octokit/types-6.16.4" sources."@rollup/plugin-babel-5.3.0" (sources."@rollup/plugin-commonjs-18.1.0" // { dependencies = [ @@ -94727,7 +94985,7 @@ in sources."@szmarczak/http-timer-1.1.2" sources."@types/cacheable-request-6.0.1" sources."@types/decompress-4.2.3" - sources."@types/download-6.2.4" + sources."@types/download-8.0.0" sources."@types/estree-0.0.39" sources."@types/glob-7.1.3" sources."@types/got-8.3.5" @@ -94738,26 +94996,25 @@ in sources."@types/istanbul-reports-1.1.2" sources."@types/keyv-3.1.1" sources."@types/minimatch-3.0.4" - sources."@types/mkdirp-0.5.2" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/node-fetch-2.5.10" sources."@types/normalize-package-data-2.4.0" sources."@types/resolve-1.17.1" sources."@types/responselike-1.0.0" - sources."@types/semver-5.5.0" + sources."@types/semver-7.3.6" sources."@types/yargs-13.0.11" sources."@types/yargs-parser-20.2.0" - sources."@typescript-eslint/types-4.26.0" - (sources."@typescript-eslint/typescript-estree-4.26.0" // { + sources."@typescript-eslint/types-4.28.0" + (sources."@typescript-eslint/typescript-estree-4.28.0" // { dependencies = [ - sources."@nodelib/fs.stat-2.0.4" + sources."@nodelib/fs.stat-2.0.5" sources."array-union-2.1.0" sources."braces-3.0.2" sources."dir-glob-3.0.1" sources."fast-glob-3.2.5" sources."fill-range-7.0.1" sources."glob-parent-5.1.2" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."ignore-5.1.8" sources."is-number-7.0.0" sources."micromatch-4.0.4" @@ -94765,12 +95022,13 @@ in sources."to-regex-range-5.0.1" ]; }) - sources."@typescript-eslint/visitor-keys-4.26.0" + sources."@typescript-eslint/visitor-keys-4.28.0" sources."@ungap/from-entries-0.2.1" sources."accepts-1.3.7" + sources."acorn-8.4.0" sources."agent-base-6.0.2" sources."aggregate-error-3.1.0" - sources."ajv-8.5.0" + sources."ajv-8.6.0" (sources."all-node-versions-8.0.0" // { dependencies = [ sources."@jest/types-25.5.0" @@ -94827,7 +95085,7 @@ in sources."asynckit-0.4.0" sources."at-least-node-1.0.0" sources."atob-2.1.2" - (sources."aws-sdk-2.918.0" // { + (sources."aws-sdk-2.932.0" // { dependencies = [ sources."buffer-4.9.2" sources."ieee754-1.1.13" @@ -94840,7 +95098,7 @@ in sources."semver-6.3.0" ]; }) - sources."babel-plugin-polyfill-corejs3-0.2.2" + sources."babel-plugin-polyfill-corejs3-0.2.3" sources."babel-plugin-polyfill-regenerator-0.2.2" sources."backoff-2.5.0" sources."balanced-match-1.0.2" @@ -94850,7 +95108,7 @@ in ]; }) sources."base64-js-1.5.1" - sources."before-after-hook-2.2.1" + sources."before-after-hook-2.2.2" sources."better-opn-2.1.1" sources."binary-extensions-2.2.0" sources."bl-4.1.0" @@ -94901,23 +95159,22 @@ in sources."cachedir-2.3.0" sources."call-bind-1.0.2" sources."call-me-maybe-1.0.1" + sources."callsite-1.0.0" sources."camelcase-5.3.1" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."cardinal-2.1.1" - sources."caw-2.0.1" (sources."chalk-4.1.1" // { dependencies = [ sources."ansi-styles-4.3.0" ]; }) sources."chardet-0.7.0" - (sources."chokidar-3.5.1" // { + (sources."chokidar-3.5.2" // { dependencies = [ sources."braces-3.0.2" sources."fill-range-7.0.1" sources."glob-parent-5.1.2" sources."is-number-7.0.0" - sources."readdirp-3.5.0" sources."to-regex-range-5.0.1" ]; }) @@ -94953,7 +95210,7 @@ in sources."strip-ansi-3.0.1" ]; }) - (sources."cli-ux-5.5.1" // { + (sources."cli-ux-5.6.2" // { dependencies = [ sources."ansi-styles-4.3.0" sources."argparse-1.0.10" @@ -94962,17 +95219,17 @@ in sources."extract-stack-2.0.0" sources."has-flag-4.0.0" sources."js-yaml-3.14.1" - sources."supports-hyperlinks-2.2.0" - sources."tslib-2.2.0" + sources."supports-color-8.1.1" + (sources."supports-hyperlinks-2.2.0" // { + dependencies = [ + sources."supports-color-7.2.0" + ]; + }) + sources."tslib-2.3.0" ]; }) sources."cli-width-2.2.1" - (sources."cliui-6.0.0" // { - dependencies = [ - sources."ansi-styles-4.3.0" - sources."wrap-ansi-6.2.0" - ]; - }) + sources."cliui-7.0.4" sources."clone-1.0.4" sources."clone-response-1.0.2" sources."code-point-at-1.1.0" @@ -94991,21 +95248,24 @@ in sources."colorspace-1.1.2" sources."combined-stream-1.0.8" sources."commander-2.20.3" - sources."common-path-prefix-2.0.0" + sources."common-path-prefix-3.0.0" sources."commondir-1.0.1" sources."component-emitter-1.3.0" sources."compress-commons-4.1.1" sources."concat-map-0.0.1" sources."concordance-5.0.4" - sources."config-chain-1.1.12" - sources."configstore-5.0.1" + (sources."configstore-5.0.1" // { + dependencies = [ + sources."dot-prop-5.3.0" + ]; + }) (sources."content-disposition-0.5.3" // { dependencies = [ sources."safe-buffer-5.1.2" ]; }) sources."content-type-1.0.4" - (sources."convert-source-map-1.7.0" // { + (sources."convert-source-map-1.8.0" // { dependencies = [ sources."safe-buffer-5.1.2" ]; @@ -95021,7 +95281,7 @@ in sources."safe-buffer-5.1.2" ]; }) - (sources."core-js-compat-3.13.1" // { + (sources."core-js-compat-3.15.1" // { dependencies = [ sources."semver-7.0.0" ]; @@ -95046,6 +95306,7 @@ in sources."ms-2.1.2" ]; }) + sources."decache-4.6.0" sources."decamelize-1.2.0" sources."decode-uri-component-0.2.0" (sources."decompress-4.2.1" // { @@ -95095,10 +95356,21 @@ in sources."defer-to-connect-1.1.3" sources."define-properties-1.1.3" sources."define-property-2.0.2" - (sources."del-5.1.0" // { + (sources."del-6.0.0" // { dependencies = [ - sources."p-map-3.0.0" + sources."@nodelib/fs.stat-2.0.5" + sources."array-union-2.1.0" + sources."braces-3.0.2" + sources."dir-glob-3.0.1" + sources."fast-glob-3.2.5" + sources."fill-range-7.0.1" + sources."glob-parent-5.1.2" + sources."globby-11.0.4" + sources."ignore-5.1.8" + sources."is-number-7.0.0" + sources."micromatch-4.0.4" sources."slash-3.0.0" + sources."to-regex-range-5.0.1" ]; }) sources."delayed-stream-1.0.0" @@ -95113,40 +95385,45 @@ in sources."detective-sass-3.0.1" sources."detective-scss-2.0.1" sources."detective-stylus-1.0.0" - (sources."detective-typescript-7.0.0" // { - dependencies = [ - sources."typescript-3.9.9" - ]; - }) + sources."detective-typescript-7.0.0" (sources."dir-glob-2.2.2" // { dependencies = [ sources."path-type-3.0.0" sources."pify-3.0.0" ]; }) - sources."dot-prop-5.3.0" + sources."dot-prop-6.0.1" sources."dotenv-10.0.0" - (sources."download-7.1.0" // { + (sources."download-8.0.0" // { dependencies = [ sources."@sindresorhus/is-0.7.0" - sources."cacheable-request-2.1.4" - sources."get-stream-3.0.0" - sources."got-8.3.2" + (sources."cacheable-request-2.1.4" // { + dependencies = [ + sources."get-stream-3.0.0" + ]; + }) + sources."get-stream-4.1.0" + (sources."got-8.3.2" // { + dependencies = [ + sources."get-stream-3.0.0" + sources."pify-3.0.0" + ]; + }) sources."http-cache-semantics-3.8.1" sources."is-plain-obj-1.1.0" sources."keyv-3.0.0" sources."lowercase-keys-1.0.0" - sources."make-dir-1.3.0" + sources."make-dir-2.1.0" sources."normalize-url-2.0.1" sources."p-cancelable-0.4.1" sources."p-event-2.3.1" - sources."pify-3.0.0" + sources."semver-5.7.1" sources."sort-keys-2.0.0" ]; }) sources."duplexer3-0.1.4" sources."ee-first-1.1.1" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" sources."elegant-spinner-1.0.1" sources."elf-cam-0.1.1" sources."emoji-regex-8.0.0" @@ -95157,7 +95434,6 @@ in sources."envinfo-7.8.1" sources."error-ex-1.3.2" sources."error-stack-parser-2.0.6" - sources."esbuild-0.11.10" sources."escalade-3.1.1" sources."escape-goat-2.1.1" sources."escape-html-1.0.3" @@ -95175,7 +95451,7 @@ in sources."etag-1.8.1" sources."eventemitter3-4.0.7" sources."events-1.1.1" - (sources."execa-5.0.1" // { + (sources."execa-5.1.1" // { dependencies = [ sources."get-stream-6.0.1" sources."human-signals-2.1.0" @@ -95250,7 +95526,7 @@ in sources."@types/yargs-15.0.13" sources."ansi-regex-5.0.0" sources."ansi-styles-4.3.0" - sources."cacheable-request-7.0.1" + sources."cacheable-request-7.0.2" sources."decompress-response-5.0.0" sources."defer-to-connect-2.0.1" sources."got-10.7.0" @@ -95264,6 +95540,7 @@ in sources."keyv-4.0.3" sources."lowercase-keys-2.0.0" sources."mimic-response-2.1.0" + sources."normalize-url-6.1.0" sources."p-cancelable-2.1.1" sources."pretty-format-25.5.0" sources."responselike-2.0.0" @@ -95272,9 +95549,9 @@ in }) sources."figures-3.2.0" sources."file-size-0.0.5" - sources."file-type-8.1.0" + sources."file-type-11.1.0" sources."filename-reserved-regex-2.0.0" - sources."filenamify-2.1.0" + sources."filenamify-3.0.0" (sources."fill-range-4.0.0" // { dependencies = [ sources."extend-shallow-2.0.1" @@ -95315,14 +95592,9 @@ in sources."get-caller-file-2.0.5" sources."get-intrinsic-1.1.1" sources."get-port-5.1.1" - sources."get-proxy-2.1.0" sources."get-stream-5.2.0" sources."get-value-2.0.6" - (sources."gh-release-fetch-1.1.0" // { - dependencies = [ - sources."semver-5.7.1" - ]; - }) + sources."gh-release-fetch-2.0.0" sources."git-repo-info-2.1.1" sources."gitconfiglocal-2.1.0" sources."glob-7.1.7" @@ -95337,7 +95609,7 @@ in sources."globals-11.12.0" (sources."globby-10.0.2" // { dependencies = [ - sources."@nodelib/fs.stat-2.0.4" + sources."@nodelib/fs.stat-2.0.5" sources."array-union-2.1.0" sources."braces-3.0.2" sources."dir-glob-3.0.1" @@ -95449,7 +95721,7 @@ in sources."supports-color-5.5.0" ]; }) - sources."inquirer-autocomplete-prompt-1.3.0" + sources."inquirer-autocomplete-prompt-1.4.0" sources."into-stream-3.1.0" sources."ipaddr.js-1.9.1" sources."is-accessor-descriptor-1.0.0" @@ -95586,7 +95858,6 @@ in }) (sources."locate-path-6.0.0" // { dependencies = [ - sources."p-limit-3.1.0" sources."p-locate-5.0.0" ]; }) @@ -95631,7 +95902,7 @@ in }) sources."lowercase-keys-1.0.1" sources."lru-cache-6.0.0" - sources."macos-release-2.4.1" + sources."macos-release-2.5.0" sources."magic-string-0.25.7" (sources."make-dir-3.1.0" // { dependencies = [ @@ -95663,8 +95934,8 @@ in sources."micro-memoize-4.0.9" sources."micromatch-3.1.10" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -95701,16 +95972,20 @@ in sources."natural-orderby-2.0.3" sources."negotiator-0.6.2" sources."nested-error-stacks-2.1.0" - (sources."netlify-7.0.0" // { + (sources."netlify-7.0.1" // { dependencies = [ sources."qs-6.10.1" ]; }) - sources."netlify-redirect-parser-3.0.29" + (sources."netlify-redirect-parser-8.0.0" // { + dependencies = [ + sources."is-plain-obj-2.1.0" + ]; + }) sources."netlify-redirector-0.2.1" sources."nice-try-1.0.5" sources."node-fetch-2.6.1" - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" sources."node-source-walk-4.2.0" (sources."node-version-alias-1.0.1" // { dependencies = [ @@ -95744,11 +96019,6 @@ in }) sources."normalize-path-3.0.0" sources."normalize-url-4.5.1" - (sources."npm-conf-1.1.3" // { - dependencies = [ - sources."pify-3.0.0" - ]; - }) sources."npm-normalize-package-bin-1.0.1" sources."npm-run-path-4.0.1" sources."number-is-nan-1.0.1" @@ -95774,7 +96044,7 @@ in sources."object.pick-1.3.0" (sources."oclif-plugin-completion-0.6.0" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."omit.js-2.0.2" @@ -95790,7 +96060,7 @@ in ]; }) sources."optionator-0.8.3" - (sources."ora-5.4.0" // { + (sources."ora-5.4.1" // { dependencies = [ sources."cli-cursor-3.1.0" sources."restore-cursor-3.1.0" @@ -95822,8 +96092,12 @@ in }) sources."p-finally-2.0.1" sources."p-is-promise-1.1.0" - sources."p-limit-2.3.0" - sources."p-locate-4.1.0" + sources."p-limit-3.1.0" + (sources."p-locate-4.1.0" // { + dependencies = [ + sources."p-limit-2.3.0" + ]; + }) sources."p-map-4.0.0" sources."p-reduce-2.1.0" (sources."p-timeout-2.0.1" // { @@ -95885,7 +96159,7 @@ in ]; }) sources."posix-character-classes-0.1.1" - sources."postcss-8.3.0" + sources."postcss-8.3.5" sources."postcss-values-parser-2.0.1" sources."precinct-8.1.0" sources."precond-0.2.3" @@ -95903,7 +96177,6 @@ in sources."printj-1.1.2" sources."process-es6-0.11.6" sources."process-nextick-args-2.0.1" - sources."proto-list-1.2.4" sources."proxy-addr-2.0.7" sources."ps-list-6.3.0" sources."pump-3.0.0" @@ -95914,7 +96187,6 @@ in sources."querystring-0.2.0" sources."queue-microtask-1.2.3" sources."random-bytes-1.0.0" - sources."random-item-3.1.0" sources."randombytes-2.1.0" sources."range-parser-1.2.1" (sources."raw-body-2.4.1" // { @@ -95975,7 +96247,7 @@ in sources."ret-0.1.15" sources."reusify-1.0.4" sources."rimraf-3.0.2" - sources."rollup-2.50.5" + sources."rollup-2.52.2" (sources."rollup-plugin-inject-3.0.2" // { dependencies = [ sources."estree-walker-0.6.1" @@ -96116,7 +96388,7 @@ in sources."supports-color-0.2.0" ]; }) - sources."statsd-client-0.4.6" + sources."statsd-client-0.4.7" sources."statuses-1.5.0" sources."strict-uri-encode-1.1.0" sources."string-width-4.2.2" @@ -96157,20 +96429,6 @@ in sources."temp-dir-2.0.0" (sources."tempy-1.0.1" // { dependencies = [ - sources."@nodelib/fs.stat-2.0.4" - sources."array-union-2.1.0" - sources."braces-3.0.2" - sources."del-6.0.0" - sources."dir-glob-3.0.1" - sources."fast-glob-3.2.5" - sources."fill-range-7.0.1" - sources."glob-parent-5.1.2" - sources."globby-11.0.3" - sources."ignore-5.1.8" - sources."is-number-7.0.0" - sources."micromatch-4.0.4" - sources."slash-3.0.0" - sources."to-regex-range-5.0.1" sources."type-fest-0.16.0" ]; }) @@ -96217,7 +96475,7 @@ in sources."type-fest-0.21.3" sources."type-is-1.6.18" sources."typedarray-to-buffer-3.1.5" - sources."typescript-4.3.2" + sources."typescript-3.9.10" sources."uid-safe-2.1.5" sources."unbzip2-stream-1.4.3" sources."unicode-canonical-property-names-ecmascript-1.0.4" @@ -96321,15 +96579,20 @@ in sources."xml2js-0.4.19" sources."xmlbuilder-9.0.7" sources."xtend-4.0.2" - sources."y18n-4.0.3" + sources."y18n-5.0.8" sources."yallist-4.0.0" (sources."yargs-15.4.1" // { dependencies = [ + sources."ansi-styles-4.3.0" + sources."cliui-6.0.0" sources."find-up-4.1.0" sources."locate-path-5.0.0" + sources."wrap-ansi-6.2.0" + sources."y18n-4.0.3" + sources."yargs-parser-18.1.3" ]; }) - sources."yargs-parser-18.1.3" + sources."yargs-parser-20.2.9" sources."yarn-1.22.10" sources."yauzl-2.10.0" sources."yocto-queue-0.1.0" @@ -96453,7 +96716,7 @@ in sources."signal-exit-3.0.3" sources."smart-buffer-4.1.0" sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."ssri-8.0.1" sources."string-width-1.0.2" sources."string_decoder-1.1.1" @@ -96635,8 +96898,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."minimist-1.2.5" sources."mkdirp-0.5.5" @@ -96887,7 +97150,7 @@ in sha512 = "P/EmWwzuY/0mQFlrklSUrVANdv9xQsbrpKrpfA8tuhhxu1OEiSgzYdo87Zj13Hi38K4f1rNPQj4rw2vEBcYS/g=="; }; dependencies = [ - sources."@babel/runtime-7.14.0" + sources."@babel/runtime-7.14.6" sources."@node-red/editor-api-1.3.5" sources."@node-red/editor-client-1.3.5" (sources."@node-red/nodes-1.3.5" // { @@ -97149,8 +97412,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-2.5.2" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."minimist-1.2.5" (sources."minipass-3.1.3" // { @@ -97173,7 +97436,7 @@ in sources."ms-2.1.2" sources."readable-stream-3.6.0" sources."string_decoder-1.3.0" - sources."ws-7.4.6" + sources."ws-7.5.0" ]; }) (sources."mqtt-packet-6.10.0" // { @@ -97304,7 +97567,7 @@ in sources."string_decoder-0.10.31" sources."strip-ansi-3.0.1" sources."strip-json-comments-2.0.1" - sources."tail-2.2.2" + sources."tail-2.2.3" (sources."tar-6.1.0" // { dependencies = [ sources."mkdirp-1.0.4" @@ -97327,7 +97590,7 @@ in sources."punycode-1.4.1" ]; }) - sources."tslib-2.2.0" + sources."tslib-2.3.0" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."type-is-1.6.18" @@ -97394,7 +97657,7 @@ in sources."combined-stream-1.0.8" sources."concat-map-0.0.1" sources."concat-stream-1.6.2" - sources."config-chain-1.1.12" + sources."config-chain-1.1.13" sources."console-control-strings-1.1.0" sources."core-util-is-1.0.2" sources."dashdash-1.14.1" @@ -97448,8 +97711,8 @@ in sources."jsonfile-1.0.1" sources."jsprim-1.4.1" sources."lru-cache-6.0.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."minimist-1.2.5" sources."minipass-3.1.3" @@ -97595,7 +97858,7 @@ in sources."supports-color-7.2.0" ]; }) - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."ci-info-2.0.0" sources."cli-boxes-2.2.1" sources."clone-response-1.0.2" @@ -97668,7 +97931,7 @@ in sources."pump-3.0.0" sources."pupa-2.1.1" sources."rc-1.2.8" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."registry-auth-token-4.2.1" sources."registry-url-5.1.0" sources."responselike-1.0.2" @@ -97729,9 +97992,9 @@ in sha512 = "CdpgqtO6JpDKJjQ2gueY0jnbz6APWA9wFXSwPv5bXg4seSBibHqQ8JyWxYlS8YRfVbpeDtj582wcAWTlfy5qNA=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."ansi-styles-3.2.1" sources."chalk-2.4.2" @@ -97742,9 +98005,9 @@ in sources."supports-color-5.5.0" ]; }) - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" (sources."@samverschueren/stream-to-observable-0.3.1" // { dependencies = [ sources."any-observable-0.3.0" @@ -97756,7 +98019,7 @@ in sources."@types/http-cache-semantics-4.0.0" sources."@types/keyv-3.1.1" sources."@types/minimist-1.2.1" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/normalize-package-data-2.4.0" sources."@types/parse-json-4.0.0" sources."@types/responselike-1.0.0" @@ -97789,7 +98052,7 @@ in sources."braces-3.0.2" sources."builtins-1.0.3" sources."cacheable-lookup-2.0.1" - (sources."cacheable-request-7.0.1" // { + (sources."cacheable-request-7.0.2" // { dependencies = [ sources."get-stream-5.2.0" ]; @@ -97849,7 +98112,7 @@ in sources."error-ex-1.3.2" sources."escape-goat-3.0.0" sources."escape-string-regexp-4.0.0" - sources."execa-5.0.1" + sources."execa-5.1.1" sources."external-editor-3.1.0" sources."fast-glob-3.2.5" sources."fastq-1.11.0" @@ -97867,7 +98130,7 @@ in sources."glob-7.1.7" sources."glob-parent-5.1.2" sources."global-dirs-2.1.0" - sources."globby-11.0.3" + sources."globby-11.0.4" (sources."got-10.7.0" // { dependencies = [ sources."get-stream-5.2.0" @@ -98059,7 +98322,7 @@ in sources."hosted-git-info-4.0.2" ]; }) - sources."normalize-url-4.5.1" + sources."normalize-url-6.1.0" (sources."npm-name-6.0.1" // { dependencies = [ sources."p-map-3.0.0" @@ -98119,6 +98382,7 @@ in sources."keyv-3.1.0" sources."lowercase-keys-1.0.1" sources."mimic-response-1.0.1" + sources."normalize-url-4.5.1" sources."p-cancelable-1.1.0" sources."responselike-1.0.2" sources."semver-6.3.0" @@ -98243,7 +98507,7 @@ in sources."xdg-basedir-4.0.0" sources."yallist-4.0.0" sources."yaml-1.10.2" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" sources."yocto-queue-0.1.0" ]; buildInputs = globalBuildInputs; @@ -98259,10 +98523,10 @@ in npm = nodeEnv.buildNodePackage { name = "npm"; packageName = "npm"; - version = "7.15.1"; + version = "7.18.1"; src = fetchurl { - url = "https://registry.npmjs.org/npm/-/npm-7.15.1.tgz"; - sha512 = "sPk+GrqawshbG3T81r2QvvSxSQXBFWyn5NGLacf87l+/odi2ZRHkWdLrg304Lw0DrwwIIaGxUjp0FJXaMtIErQ=="; + url = "https://registry.npmjs.org/npm/-/npm-7.18.1.tgz"; + sha512 = "fu7rMtc4ZaDnFlZsiLhqwWWs6KixOcBGiBLoJH+AbuaznwtT8mYQnq5nGNN14Jib+E9OjkjNRgg+X45Ia9xtKQ=="; }; buildInputs = globalBuildInputs; meta = { @@ -98277,16 +98541,16 @@ in npm-check-updates = nodeEnv.buildNodePackage { name = "npm-check-updates"; packageName = "npm-check-updates"; - version = "11.6.0"; + version = "11.7.1"; src = fetchurl { - url = "https://registry.npmjs.org/npm-check-updates/-/npm-check-updates-11.6.0.tgz"; - sha512 = "/l4S7Gh+8+Rg5itWsqFya5RRSHtPzw5neyAlbWNJfBfEeRX6lYVxKgs85QFBOKrZj3eL5MGBaUW8228TmjMhrw=="; + url = "https://registry.npmjs.org/npm-check-updates/-/npm-check-updates-11.7.1.tgz"; + sha512 = "1ZH1le6fIuCS/Lrj9hKzds2bBcpc60cENZJ681rJ+cx202JmwsmnVmPj6lC4f9MNb0/D81QXR0QbIt5oqDKQtA=="; }; dependencies = [ - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" - sources."@npmcli/git-2.0.9" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" + sources."@npmcli/git-2.1.0" sources."@npmcli/installed-package-contents-1.0.7" sources."@npmcli/move-file-1.1.2" sources."@npmcli/node-gyp-1.0.2" @@ -98404,7 +98668,7 @@ in sources."ini-2.0.0" ]; }) - sources."globby-11.0.3" + sources."globby-11.0.4" sources."got-9.6.0" sources."graceful-fs-4.2.6" sources."har-schema-2.0.0" @@ -98478,13 +98742,13 @@ in sources."semver-6.3.0" ]; }) - sources."make-fetch-happen-8.0.14" + sources."make-fetch-happen-9.0.3" sources."map-age-cleaner-0.1.3" sources."mem-8.1.1" sources."merge2-1.4.1" sources."micromatch-4.0.4" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-3.1.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -98499,16 +98763,17 @@ in sources."minizlib-2.1.2" sources."mkdirp-1.0.4" sources."ms-2.1.2" + sources."negotiator-0.6.2" sources."node-gyp-7.1.2" sources."nopt-5.0.0" sources."normalize-url-4.5.1" sources."npm-bundled-1.1.2" sources."npm-install-checks-4.0.0" sources."npm-normalize-package-bin-1.0.1" - sources."npm-package-arg-8.1.2" + sources."npm-package-arg-8.1.5" sources."npm-packlist-2.2.2" sources."npm-pick-manifest-6.1.1" - sources."npm-registry-fetch-10.1.2" + sources."npm-registry-fetch-11.0.0" sources."npmlog-4.1.2" sources."number-is-nan-1.0.1" sources."oauth-sign-0.9.0" @@ -98525,7 +98790,7 @@ in sources."semver-6.3.0" ]; }) - sources."pacote-11.3.3" + sources."pacote-11.3.4" sources."parse-github-url-1.0.2" sources."path-exists-4.0.0" sources."path-is-absolute-1.0.1" @@ -98573,7 +98838,7 @@ in sources."slash-3.0.0" sources."smart-buffer-4.1.0" sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."spawn-please-1.0.0" sources."sshpk-1.16.1" sources."ssri-8.0.1" @@ -98667,7 +98932,7 @@ in sources."coffee-script-1.12.7" sources."combined-stream-1.0.8" sources."concat-map-0.0.1" - (sources."config-chain-1.1.12" // { + (sources."config-chain-1.1.13" // { dependencies = [ sources."ini-1.3.8" ]; @@ -98721,8 +98986,8 @@ in sources."json-stringify-safe-5.0.1" sources."jsonfile-1.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."minimist-1.2.5" sources."mkdirp-0.3.5" @@ -98860,130 +99125,130 @@ in sha512 = "hpku8mW67U6PXQIenW6NBbphBOMb8XzW6B9r093DUhYj5GN2FUB/CXCiz5hKoPYUsusZ35BpProH8AUF9bh5IQ=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" - (sources."@babel/core-7.14.3" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" + (sources."@babel/core-7.14.6" // { dependencies = [ sources."json5-2.2.0" sources."semver-6.3.0" sources."source-map-0.5.7" ]; }) - (sources."@babel/generator-7.14.3" // { + (sources."@babel/generator-7.14.5" // { dependencies = [ sources."source-map-0.5.7" ]; }) - sources."@babel/helper-annotate-as-pure-7.12.13" - sources."@babel/helper-builder-binary-assignment-operator-visitor-7.12.13" - (sources."@babel/helper-compilation-targets-7.14.4" // { + sources."@babel/helper-annotate-as-pure-7.14.5" + sources."@babel/helper-builder-binary-assignment-operator-visitor-7.14.5" + (sources."@babel/helper-compilation-targets-7.14.5" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/helper-create-class-features-plugin-7.14.4" - sources."@babel/helper-create-regexp-features-plugin-7.14.3" + sources."@babel/helper-create-class-features-plugin-7.14.6" + sources."@babel/helper-create-regexp-features-plugin-7.14.5" (sources."@babel/helper-define-polyfill-provider-0.2.3" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/helper-explode-assignable-expression-7.13.0" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-hoist-variables-7.13.16" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-plugin-utils-7.13.0" - sources."@babel/helper-remap-async-to-generator-7.13.0" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-skip-transparent-expression-wrappers-7.12.1" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helper-wrap-function-7.13.0" - sources."@babel/helpers-7.14.0" - sources."@babel/highlight-7.14.0" - sources."@babel/parser-7.14.4" - sources."@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining-7.13.12" - sources."@babel/plugin-proposal-async-generator-functions-7.14.2" - sources."@babel/plugin-proposal-class-properties-7.13.0" - sources."@babel/plugin-proposal-class-static-block-7.14.3" - sources."@babel/plugin-proposal-dynamic-import-7.14.2" - sources."@babel/plugin-proposal-export-namespace-from-7.14.2" - sources."@babel/plugin-proposal-json-strings-7.14.2" - sources."@babel/plugin-proposal-logical-assignment-operators-7.14.2" - sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.2" - sources."@babel/plugin-proposal-numeric-separator-7.14.2" - sources."@babel/plugin-proposal-object-rest-spread-7.14.4" - sources."@babel/plugin-proposal-optional-catch-binding-7.14.2" - sources."@babel/plugin-proposal-optional-chaining-7.14.2" - sources."@babel/plugin-proposal-private-methods-7.13.0" - sources."@babel/plugin-proposal-private-property-in-object-7.14.0" - sources."@babel/plugin-proposal-unicode-property-regex-7.12.13" + sources."@babel/helper-explode-assignable-expression-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-plugin-utils-7.14.5" + sources."@babel/helper-remap-async-to-generator-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-skip-transparent-expression-wrappers-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helper-wrap-function-7.14.5" + sources."@babel/helpers-7.14.6" + sources."@babel/highlight-7.14.5" + sources."@babel/parser-7.14.7" + sources."@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining-7.14.5" + sources."@babel/plugin-proposal-async-generator-functions-7.14.7" + sources."@babel/plugin-proposal-class-properties-7.14.5" + sources."@babel/plugin-proposal-class-static-block-7.14.5" + sources."@babel/plugin-proposal-dynamic-import-7.14.5" + sources."@babel/plugin-proposal-export-namespace-from-7.14.5" + sources."@babel/plugin-proposal-json-strings-7.14.5" + sources."@babel/plugin-proposal-logical-assignment-operators-7.14.5" + sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.5" + sources."@babel/plugin-proposal-numeric-separator-7.14.5" + sources."@babel/plugin-proposal-object-rest-spread-7.14.7" + sources."@babel/plugin-proposal-optional-catch-binding-7.14.5" + sources."@babel/plugin-proposal-optional-chaining-7.14.5" + sources."@babel/plugin-proposal-private-methods-7.14.5" + sources."@babel/plugin-proposal-private-property-in-object-7.14.5" + sources."@babel/plugin-proposal-unicode-property-regex-7.14.5" sources."@babel/plugin-syntax-async-generators-7.8.4" sources."@babel/plugin-syntax-class-properties-7.12.13" - sources."@babel/plugin-syntax-class-static-block-7.12.13" + sources."@babel/plugin-syntax-class-static-block-7.14.5" sources."@babel/plugin-syntax-dynamic-import-7.8.3" sources."@babel/plugin-syntax-export-namespace-from-7.8.3" - sources."@babel/plugin-syntax-flow-7.12.13" + sources."@babel/plugin-syntax-flow-7.14.5" sources."@babel/plugin-syntax-json-strings-7.8.3" - sources."@babel/plugin-syntax-jsx-7.12.13" + sources."@babel/plugin-syntax-jsx-7.14.5" sources."@babel/plugin-syntax-logical-assignment-operators-7.10.4" sources."@babel/plugin-syntax-nullish-coalescing-operator-7.8.3" sources."@babel/plugin-syntax-numeric-separator-7.10.4" sources."@babel/plugin-syntax-object-rest-spread-7.8.3" sources."@babel/plugin-syntax-optional-catch-binding-7.8.3" sources."@babel/plugin-syntax-optional-chaining-7.8.3" - sources."@babel/plugin-syntax-private-property-in-object-7.14.0" - sources."@babel/plugin-syntax-top-level-await-7.12.13" - sources."@babel/plugin-transform-arrow-functions-7.13.0" - sources."@babel/plugin-transform-async-to-generator-7.13.0" - sources."@babel/plugin-transform-block-scoped-functions-7.12.13" - sources."@babel/plugin-transform-block-scoping-7.14.4" - sources."@babel/plugin-transform-classes-7.14.4" - sources."@babel/plugin-transform-computed-properties-7.13.0" - sources."@babel/plugin-transform-destructuring-7.14.4" - sources."@babel/plugin-transform-dotall-regex-7.12.13" - sources."@babel/plugin-transform-duplicate-keys-7.12.13" - sources."@babel/plugin-transform-exponentiation-operator-7.12.13" - sources."@babel/plugin-transform-flow-strip-types-7.13.0" - sources."@babel/plugin-transform-for-of-7.13.0" - sources."@babel/plugin-transform-function-name-7.12.13" - sources."@babel/plugin-transform-literals-7.12.13" - sources."@babel/plugin-transform-member-expression-literals-7.12.13" - sources."@babel/plugin-transform-modules-amd-7.14.2" - sources."@babel/plugin-transform-modules-commonjs-7.14.0" - sources."@babel/plugin-transform-modules-systemjs-7.13.8" - sources."@babel/plugin-transform-modules-umd-7.14.0" - sources."@babel/plugin-transform-named-capturing-groups-regex-7.12.13" - sources."@babel/plugin-transform-new-target-7.12.13" - sources."@babel/plugin-transform-object-super-7.12.13" - sources."@babel/plugin-transform-parameters-7.14.2" - sources."@babel/plugin-transform-property-literals-7.12.13" - sources."@babel/plugin-transform-react-jsx-7.14.3" - sources."@babel/plugin-transform-regenerator-7.13.15" - sources."@babel/plugin-transform-reserved-words-7.12.13" - sources."@babel/plugin-transform-shorthand-properties-7.12.13" - sources."@babel/plugin-transform-spread-7.13.0" - sources."@babel/plugin-transform-sticky-regex-7.12.13" - sources."@babel/plugin-transform-template-literals-7.13.0" - sources."@babel/plugin-transform-typeof-symbol-7.12.13" - sources."@babel/plugin-transform-unicode-escapes-7.12.13" - sources."@babel/plugin-transform-unicode-regex-7.12.13" - (sources."@babel/preset-env-7.14.4" // { + sources."@babel/plugin-syntax-private-property-in-object-7.14.5" + sources."@babel/plugin-syntax-top-level-await-7.14.5" + sources."@babel/plugin-transform-arrow-functions-7.14.5" + sources."@babel/plugin-transform-async-to-generator-7.14.5" + sources."@babel/plugin-transform-block-scoped-functions-7.14.5" + sources."@babel/plugin-transform-block-scoping-7.14.5" + sources."@babel/plugin-transform-classes-7.14.5" + sources."@babel/plugin-transform-computed-properties-7.14.5" + sources."@babel/plugin-transform-destructuring-7.14.7" + sources."@babel/plugin-transform-dotall-regex-7.14.5" + sources."@babel/plugin-transform-duplicate-keys-7.14.5" + sources."@babel/plugin-transform-exponentiation-operator-7.14.5" + sources."@babel/plugin-transform-flow-strip-types-7.14.5" + sources."@babel/plugin-transform-for-of-7.14.5" + sources."@babel/plugin-transform-function-name-7.14.5" + sources."@babel/plugin-transform-literals-7.14.5" + sources."@babel/plugin-transform-member-expression-literals-7.14.5" + sources."@babel/plugin-transform-modules-amd-7.14.5" + sources."@babel/plugin-transform-modules-commonjs-7.14.5" + sources."@babel/plugin-transform-modules-systemjs-7.14.5" + sources."@babel/plugin-transform-modules-umd-7.14.5" + sources."@babel/plugin-transform-named-capturing-groups-regex-7.14.7" + sources."@babel/plugin-transform-new-target-7.14.5" + sources."@babel/plugin-transform-object-super-7.14.5" + sources."@babel/plugin-transform-parameters-7.14.5" + sources."@babel/plugin-transform-property-literals-7.14.5" + sources."@babel/plugin-transform-react-jsx-7.14.5" + sources."@babel/plugin-transform-regenerator-7.14.5" + sources."@babel/plugin-transform-reserved-words-7.14.5" + sources."@babel/plugin-transform-shorthand-properties-7.14.5" + sources."@babel/plugin-transform-spread-7.14.6" + sources."@babel/plugin-transform-sticky-regex-7.14.5" + sources."@babel/plugin-transform-template-literals-7.14.5" + sources."@babel/plugin-transform-typeof-symbol-7.14.5" + sources."@babel/plugin-transform-unicode-escapes-7.14.5" + sources."@babel/plugin-transform-unicode-regex-7.14.5" + (sources."@babel/preset-env-7.14.7" // { dependencies = [ sources."semver-6.3.0" ]; }) sources."@babel/preset-modules-0.1.4" - sources."@babel/runtime-7.14.0" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/runtime-7.14.6" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" sources."@iarna/toml-2.2.5" sources."@mrmlnc/readdir-enhanced-2.2.1" sources."@nodelib/fs.stat-1.1.3" @@ -99043,7 +99308,7 @@ in sources."semver-6.3.0" ]; }) - sources."babel-plugin-polyfill-corejs3-0.2.2" + sources."babel-plugin-polyfill-corejs3-0.2.3" sources."babel-plugin-polyfill-regenerator-0.2.2" (sources."babel-runtime-6.26.0" // { dependencies = [ @@ -99105,7 +99370,7 @@ in sources."caller-path-2.0.0" sources."callsites-2.0.0" sources."caniuse-api-3.0.0" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."caseless-0.12.0" sources."chalk-2.4.2" sources."chokidar-2.1.8" @@ -99129,10 +99394,10 @@ in sources."concat-stream-1.6.2" sources."console-browserify-1.2.0" sources."constants-browserify-1.0.0" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."copy-descriptor-0.1.1" sources."core-js-2.6.12" - (sources."core-js-compat-3.13.1" // { + (sources."core-js-compat-3.15.1" // { dependencies = [ sources."semver-7.0.0" ]; @@ -99243,7 +99508,7 @@ in sources."duplexer2-0.1.4" sources."ecc-jsbn-0.1.2" sources."ee-first-1.1.1" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" (sources."elliptic-6.5.4" // { dependencies = [ sources."bn.js-4.12.0" @@ -99358,7 +99623,7 @@ in dependencies = [ sources."dom-serializer-1.3.2" sources."domelementtype-2.2.0" - sources."domutils-2.6.0" + sources."domutils-2.7.0" ]; }) sources."http-errors-1.7.3" @@ -99430,7 +99695,7 @@ in sources."acorn-6.4.2" sources."escodegen-1.14.3" sources."esprima-4.0.1" - sources."ws-6.2.1" + sources."ws-6.2.2" ]; }) sources."jsesc-2.5.2" @@ -99474,8 +99739,8 @@ in ]; }) sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."minimalistic-assert-1.0.1" sources."minimalistic-crypto-utils-1.0.1" @@ -99505,7 +99770,7 @@ in sources."punycode-1.4.1" ]; }) - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" sources."normalize-path-3.0.0" sources."normalize-url-3.3.0" sources."nth-check-1.0.2" @@ -99543,7 +99808,7 @@ in sources."physical-cpu-count-2.0.0" sources."pn-1.1.0" sources."posix-character-classes-0.1.1" - (sources."postcss-7.0.35" // { + (sources."postcss-7.0.36" // { dependencies = [ sources."supports-color-6.1.0" ]; @@ -99849,7 +100114,7 @@ in sources."which-boxed-primitive-1.0.2" sources."word-wrap-1.2.3" sources."wrappy-1.0.2" - sources."ws-5.2.2" + sources."ws-5.2.3" sources."xml-name-validator-3.0.0" sources."xmlchars-2.2.0" sources."xtend-4.0.2" @@ -100019,8 +100284,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."minimist-1.2.5" sources."mkdirp-0.5.5" @@ -100114,7 +100379,7 @@ in sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."type-is-1.6.18" - sources."uglify-js-3.13.8" + sources."uglify-js-3.13.9" sources."unix-dgram-2.0.4" sources."unpipe-1.0.0" sources."uri-js-4.4.1" @@ -100137,7 +100402,7 @@ in sources."yargs-parser-13.1.2" ]; }) - sources."yargs-parser-15.0.1" + sources."yargs-parser-15.0.3" ]; buildInputs = globalBuildInputs; meta = { @@ -100348,7 +100613,7 @@ in sources."internal-ip-1.2.0" sources."ip-1.1.5" sources."ip-set-1.0.2" - sources."ipaddr.js-2.0.0" + sources."ipaddr.js-2.0.1" sources."is-arguments-1.1.0" sources."is-arrayish-0.2.1" sources."is-core-module-2.4.0" @@ -100453,7 +100718,7 @@ in sources."run-async-2.4.1" sources."run-parallel-1.2.0" sources."run-series-1.1.9" - sources."rusha-0.8.13" + sources."rusha-0.8.14" sources."rxjs-5.5.12" sources."safe-buffer-5.1.2" sources."safer-buffer-2.1.2" @@ -100727,8 +100992,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" sources."minimist-1.2.5" @@ -100800,7 +101065,7 @@ in sources."rimraf-2.7.1" sources."run-parallel-1.2.0" sources."run-series-1.1.9" - sources."rusha-0.8.13" + sources."rusha-0.8.14" sources."safe-buffer-5.1.2" sources."safer-buffer-2.1.2" (sources."send-0.17.1" // { @@ -100902,10 +101167,10 @@ in pm2 = nodeEnv.buildNodePackage { name = "pm2"; packageName = "pm2"; - version = "4.5.6"; + version = "5.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/pm2/-/pm2-4.5.6.tgz"; - sha512 = "4J5q704Xl6VmpmQhXFGMJL4kXyyQw3AZM1FE9vRxhS3LiDI/+WVBtOM6pqJ4g/RKW+AUjEkc23i/DCC4BVenDA=="; + url = "https://registry.npmjs.org/pm2/-/pm2-5.1.0.tgz"; + sha512 = "reJ35NOxM4+g7H0enW47HJsp32CszKkseCojAuUMUkffyXsGDKBMnDqhxAZMZKtHUUjl0cWFEqKehqB0ODH8Kw=="; }; dependencies = [ (sources."@opencensus/core-0.0.9" // { @@ -100919,7 +101184,7 @@ in sources."semver-5.7.1" ]; }) - (sources."@pm2/agent-1.0.8" // { + (sources."@pm2/agent-2.0.0" // { dependencies = [ sources."semver-7.2.3" ]; @@ -100946,11 +101211,7 @@ in sources."ansi-colors-4.1.1" sources."ansi-styles-4.3.0" sources."anymatch-3.1.2" - (sources."argparse-1.0.10" // { - dependencies = [ - sources."sprintf-js-1.0.3" - ]; - }) + sources."argparse-1.0.10" sources."ast-types-0.13.4" sources."async-3.2.0" (sources."async-listener-0.6.10" // { @@ -100963,13 +101224,14 @@ in sources."binary-extensions-2.2.0" sources."blessed-0.1.81" sources."bodec-0.1.0" + sources."boolean-3.1.2" sources."brace-expansion-1.1.11" sources."braces-3.0.2" sources."buffer-from-1.1.1" sources."bytes-3.1.0" sources."chalk-3.0.0" sources."charm-0.1.2" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."cli-tableau-2.0.1" sources."color-convert-2.0.1" sources."color-name-1.1.4" @@ -100993,7 +101255,9 @@ in sources."estraverse-4.3.0" sources."esutils-2.0.3" sources."eventemitter2-5.0.1" + sources."fast-json-patch-3.0.0-1" sources."fast-levenshtein-2.0.6" + sources."fast-printf-1.6.5" sources."fclone-1.0.11" sources."file-uri-to-path-2.0.0" sources."fill-range-7.0.1" @@ -101026,6 +101290,7 @@ in sources."is-number-7.0.0" sources."isarray-0.0.1" sources."js-git-0.7.8" + sources."json-stringify-safe-5.0.1" sources."jsonfile-4.0.0" sources."lazy-1.0.11" sources."levn-0.3.0" @@ -101064,15 +101329,15 @@ in sources."pm2-axon-rpc-0.7.1" sources."pm2-deploy-1.0.2" sources."pm2-multimeter-0.1.2" + sources."pm2-sysmonit-1.2.8" sources."prelude-ls-1.1.2" sources."promptly-2.2.0" sources."proxy-agent-4.0.1" sources."proxy-from-env-1.1.0" - sources."ps-list-6.3.0" sources."raw-body-2.4.1" sources."read-1.0.7" sources."readable-stream-1.1.14" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."require-in-the-middle-5.1.0" sources."resolve-1.20.0" sources."run-series-1.1.9" @@ -101090,17 +101355,19 @@ in sources."signal-exit-3.0.3" sources."smart-buffer-4.1.0" sources."socks-2.6.1" - sources."socks-proxy-agent-5.0.0" + sources."socks-proxy-agent-5.0.1" sources."source-map-0.6.1" sources."source-map-support-0.5.19" - sources."sprintf-js-1.1.2" + sources."sprintf-js-1.0.3" sources."statuses-1.5.0" sources."string_decoder-0.10.31" sources."supports-color-7.2.0" + sources."systeminformation-5.7.7" sources."to-regex-range-5.0.1" sources."toidentifier-1.0.0" - sources."tslib-2.2.0" + sources."tslib-2.3.0" sources."tv4-1.3.0" + sources."tx2-1.0.4" sources."type-check-0.3.2" sources."universalify-0.1.2" sources."unpipe-1.0.0" @@ -101112,7 +101379,7 @@ in }) sources."word-wrap-1.2.3" sources."wrappy-1.0.2" - sources."ws-7.2.5" + sources."ws-7.4.6" sources."xregexp-2.0.0" sources."yallist-3.1.1" sources."yamljs-0.3.0" @@ -101130,10 +101397,10 @@ in pnpm = nodeEnv.buildNodePackage { name = "pnpm"; packageName = "pnpm"; - version = "6.6.2"; + version = "6.9.0"; src = fetchurl { - url = "https://registry.npmjs.org/pnpm/-/pnpm-6.6.2.tgz"; - sha512 = "w1YEyx+xiTbrxVt5OP6JG0LqwkK/hq2OkCYj7RZhK9oyv7cCEkgkX5Z5MPVC1wTCv2kQDJRoXzBeedPiIhzN8Q=="; + url = "https://registry.npmjs.org/pnpm/-/pnpm-6.9.0.tgz"; + sha512 = "PYB3AujuDut50PAe7m8jAggruh0D8/Zm+nO2QprVfG1Xug1zAOsMMJEc+wjvEC9irFwT20Qu4qvr+lEiXyK1HA=="; }; buildInputs = globalBuildInputs; meta = { @@ -101182,22 +101449,9 @@ in sha512 = "leHXsQRq89S3JC9zw/tKyiVV2jAhnfQe0J8VI4eQQbUjwIe0XxVqLrR+7UsahF1s9wi4GlqP6SJ8ydf44cgF2Q=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { - dependencies = [ - sources."ansi-styles-3.2.1" - sources."chalk-2.4.2" - sources."color-convert-1.9.3" - sources."color-name-1.1.3" - sources."has-flag-3.0.0" - sources."supports-color-5.5.0" - ]; - }) - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" - sources."@types/parse-json-4.0.0" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."ansi-regex-5.0.0" sources."ansi-styles-4.3.0" sources."anymatch-3.1.2" @@ -101205,20 +101459,16 @@ in sources."at-least-node-1.0.0" sources."binary-extensions-2.2.0" sources."braces-3.0.2" - sources."callsites-3.1.0" sources."chalk-4.1.1" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."cliui-7.0.4" sources."color-convert-2.0.1" sources."color-name-1.1.4" sources."colorette-1.2.2" - sources."cosmiconfig-7.0.0" sources."dependency-graph-0.9.0" sources."dir-glob-3.0.1" sources."emoji-regex-8.0.0" - sources."error-ex-1.3.2" sources."escalade-3.1.1" - sources."escape-string-regexp-1.0.5" sources."fast-glob-3.2.5" sources."fastq-1.11.0" sources."fill-range-7.0.1" @@ -101227,27 +101477,19 @@ in sources."get-caller-file-2.0.5" sources."get-stdin-8.0.0" sources."glob-parent-5.1.2" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."graceful-fs-4.2.6" sources."has-flag-4.0.0" sources."ignore-5.1.8" sources."import-cwd-3.0.0" - sources."import-fresh-3.3.0" - (sources."import-from-3.0.0" // { - dependencies = [ - sources."resolve-from-5.0.0" - ]; - }) - sources."is-arrayish-0.2.1" + sources."import-from-3.0.0" sources."is-binary-path-2.1.0" sources."is-extglob-2.1.1" sources."is-fullwidth-code-point-3.0.0" sources."is-glob-4.0.1" sources."is-number-7.0.0" - sources."js-tokens-4.0.0" - sources."json-parse-even-better-errors-2.3.1" sources."jsonfile-6.1.0" - sources."lines-and-columns-1.1.6" + sources."lilconfig-2.0.3" sources."lodash.difference-4.5.0" sources."lodash.forown-4.4.0" sources."lodash.get-4.4.2" @@ -101256,19 +101498,17 @@ in sources."merge2-1.4.1" sources."micromatch-4.0.4" sources."normalize-path-3.0.0" - sources."parent-module-1.0.1" - sources."parse-json-5.2.0" sources."path-type-4.0.0" sources."picomatch-2.3.0" sources."pify-2.3.0" - sources."postcss-load-config-3.0.1" + sources."postcss-load-config-3.1.0" sources."postcss-reporter-7.0.2" sources."pretty-hrtime-1.0.3" sources."queue-microtask-1.2.3" sources."read-cache-1.0.0" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."require-directory-2.1.1" - sources."resolve-from-4.0.0" + sources."resolve-from-5.0.0" sources."reusify-1.0.4" sources."run-parallel-1.2.0" sources."slash-3.0.0" @@ -101281,7 +101521,7 @@ in sources."y18n-5.0.8" sources."yaml-1.10.2" sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -101296,10 +101536,10 @@ in prettier = nodeEnv.buildNodePackage { name = "prettier"; packageName = "prettier"; - version = "2.3.0"; + version = "2.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/prettier/-/prettier-2.3.0.tgz"; - sha512 = "kXtO4s0Lz/DW/IJ9QdWhAf7/NmPWQXkFr/r/WkR3vyI+0v8amTDxiaQSLzs8NBlytfLWX/7uQUMIW677yLKl4w=="; + url = "https://registry.npmjs.org/prettier/-/prettier-2.3.1.tgz"; + sha512 = "p+vNbgpLjif/+D+DwAZAbndtRrR0md0MwfmOVN9N+2RgyACMT+7tfaRnT+WDPkqnuVwleyuBIG2XBxKDme3hPA=="; }; buildInputs = globalBuildInputs; meta = { @@ -101616,10 +101856,10 @@ in purescript-language-server = nodeEnv.buildNodePackage { name = "purescript-language-server"; packageName = "purescript-language-server"; - version = "0.15.0"; + version = "0.15.2"; src = fetchurl { - url = "https://registry.npmjs.org/purescript-language-server/-/purescript-language-server-0.15.0.tgz"; - sha512 = "zzVqn7EnHdFYVrXhIVQ5LJqQ1ysZb7leo6kdNnxwkBgvmdrdi68OQBPG3QlmJ+LULnEyKhhWyAdb5lc+W2Ha1Q=="; + url = "https://registry.npmjs.org/purescript-language-server/-/purescript-language-server-0.15.2.tgz"; + sha512 = "dlxcc6Fv7rcXO3uFVcOgZturcKknB4J00ITJjZCrORTjw5eVbGcSTKrSeSAlNZWaUYu0HQX9NHVKtHDG/6rBNw=="; }; dependencies = [ sources."isexe-2.0.0" @@ -101682,10 +101922,10 @@ in pyright = nodeEnv.buildNodePackage { name = "pyright"; packageName = "pyright"; - version = "1.1.145"; + version = "1.1.151"; src = fetchurl { - url = "https://registry.npmjs.org/pyright/-/pyright-1.1.145.tgz"; - sha512 = "eyrK9Ilut2shvqi/TFmpfUrm7U6DrkskMa8UPofkGJZCO1PJzVwzKaGWrR57zlbcAxs5PVvK9JGSIO9DJUVNyA=="; + url = "https://registry.npmjs.org/pyright/-/pyright-1.1.151.tgz"; + sha512 = "R/Zr6VqXghuFLm7y3a8HoCrA+mfy+Zp+mp6P8gFZeJO9Rl1kQLJhfc/y4QKSQHZWxXOBGo+AFDi/rWLZfNBEgQ=="; }; buildInputs = globalBuildInputs; meta = { @@ -101729,7 +101969,7 @@ in sources."command-line-usage-5.0.5" sources."concat-map-0.0.1" sources."concat-stream-1.6.2" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."core-util-is-1.0.2" sources."cross-spawn-6.0.5" sources."decamelize-1.2.0" @@ -102033,142 +102273,142 @@ in sha512 = "coA9MuNPfN+8TyFj7aOycw2e5W9t+sSgFOUyK30oDrh2MWWWHLjY0I4V1puyCconC2arggfDE2GYXvqOTCGv9Q=="; }; dependencies = [ - sources."@babel/cli-7.14.3" - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" - (sources."@babel/core-7.14.3" // { + sources."@babel/cli-7.14.5" + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" + (sources."@babel/core-7.14.6" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/generator-7.14.3" - sources."@babel/helper-annotate-as-pure-7.12.13" - sources."@babel/helper-builder-binary-assignment-operator-visitor-7.12.13" - (sources."@babel/helper-compilation-targets-7.14.4" // { + sources."@babel/generator-7.14.5" + sources."@babel/helper-annotate-as-pure-7.14.5" + sources."@babel/helper-builder-binary-assignment-operator-visitor-7.14.5" + (sources."@babel/helper-compilation-targets-7.14.5" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/helper-create-class-features-plugin-7.14.4" - sources."@babel/helper-create-regexp-features-plugin-7.14.3" + sources."@babel/helper-create-class-features-plugin-7.14.6" + sources."@babel/helper-create-regexp-features-plugin-7.14.5" (sources."@babel/helper-define-polyfill-provider-0.2.3" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/helper-explode-assignable-expression-7.13.0" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-hoist-variables-7.13.16" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-plugin-utils-7.13.0" - sources."@babel/helper-remap-async-to-generator-7.13.0" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-skip-transparent-expression-wrappers-7.12.1" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helper-wrap-function-7.13.0" - sources."@babel/helpers-7.14.0" - sources."@babel/highlight-7.14.0" - sources."@babel/parser-7.14.4" - sources."@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining-7.13.12" - sources."@babel/plugin-proposal-async-generator-functions-7.14.2" - sources."@babel/plugin-proposal-class-properties-7.13.0" - sources."@babel/plugin-proposal-class-static-block-7.14.3" - sources."@babel/plugin-proposal-dynamic-import-7.14.2" - sources."@babel/plugin-proposal-export-default-from-7.12.13" - sources."@babel/plugin-proposal-export-namespace-from-7.14.2" - sources."@babel/plugin-proposal-json-strings-7.14.2" - sources."@babel/plugin-proposal-logical-assignment-operators-7.14.2" - sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.2" - sources."@babel/plugin-proposal-numeric-separator-7.14.2" - sources."@babel/plugin-proposal-object-rest-spread-7.14.4" - sources."@babel/plugin-proposal-optional-catch-binding-7.14.2" - sources."@babel/plugin-proposal-optional-chaining-7.14.2" - sources."@babel/plugin-proposal-private-methods-7.13.0" - sources."@babel/plugin-proposal-private-property-in-object-7.14.0" - sources."@babel/plugin-proposal-unicode-property-regex-7.12.13" + sources."@babel/helper-explode-assignable-expression-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-plugin-utils-7.14.5" + sources."@babel/helper-remap-async-to-generator-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-skip-transparent-expression-wrappers-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helper-wrap-function-7.14.5" + sources."@babel/helpers-7.14.6" + sources."@babel/highlight-7.14.5" + sources."@babel/parser-7.14.7" + sources."@babel/plugin-bugfix-v8-spread-parameters-in-optional-chaining-7.14.5" + sources."@babel/plugin-proposal-async-generator-functions-7.14.7" + sources."@babel/plugin-proposal-class-properties-7.14.5" + sources."@babel/plugin-proposal-class-static-block-7.14.5" + sources."@babel/plugin-proposal-dynamic-import-7.14.5" + sources."@babel/plugin-proposal-export-default-from-7.14.5" + sources."@babel/plugin-proposal-export-namespace-from-7.14.5" + sources."@babel/plugin-proposal-json-strings-7.14.5" + sources."@babel/plugin-proposal-logical-assignment-operators-7.14.5" + sources."@babel/plugin-proposal-nullish-coalescing-operator-7.14.5" + sources."@babel/plugin-proposal-numeric-separator-7.14.5" + sources."@babel/plugin-proposal-object-rest-spread-7.14.7" + sources."@babel/plugin-proposal-optional-catch-binding-7.14.5" + sources."@babel/plugin-proposal-optional-chaining-7.14.5" + sources."@babel/plugin-proposal-private-methods-7.14.5" + sources."@babel/plugin-proposal-private-property-in-object-7.14.5" + sources."@babel/plugin-proposal-unicode-property-regex-7.14.5" sources."@babel/plugin-syntax-async-generators-7.8.4" sources."@babel/plugin-syntax-class-properties-7.12.13" - sources."@babel/plugin-syntax-class-static-block-7.12.13" + sources."@babel/plugin-syntax-class-static-block-7.14.5" sources."@babel/plugin-syntax-dynamic-import-7.8.3" - sources."@babel/plugin-syntax-export-default-from-7.12.13" + sources."@babel/plugin-syntax-export-default-from-7.14.5" sources."@babel/plugin-syntax-export-namespace-from-7.8.3" sources."@babel/plugin-syntax-json-strings-7.8.3" - sources."@babel/plugin-syntax-jsx-7.12.13" + sources."@babel/plugin-syntax-jsx-7.14.5" sources."@babel/plugin-syntax-logical-assignment-operators-7.10.4" sources."@babel/plugin-syntax-nullish-coalescing-operator-7.8.3" sources."@babel/plugin-syntax-numeric-separator-7.10.4" sources."@babel/plugin-syntax-object-rest-spread-7.8.3" sources."@babel/plugin-syntax-optional-catch-binding-7.8.3" sources."@babel/plugin-syntax-optional-chaining-7.8.3" - sources."@babel/plugin-syntax-private-property-in-object-7.14.0" - sources."@babel/plugin-syntax-top-level-await-7.12.13" - sources."@babel/plugin-transform-arrow-functions-7.13.0" - sources."@babel/plugin-transform-async-to-generator-7.13.0" - sources."@babel/plugin-transform-block-scoped-functions-7.12.13" - sources."@babel/plugin-transform-block-scoping-7.14.4" - sources."@babel/plugin-transform-classes-7.14.4" - sources."@babel/plugin-transform-computed-properties-7.13.0" - sources."@babel/plugin-transform-destructuring-7.14.4" - sources."@babel/plugin-transform-dotall-regex-7.12.13" - sources."@babel/plugin-transform-duplicate-keys-7.12.13" - sources."@babel/plugin-transform-exponentiation-operator-7.12.13" - sources."@babel/plugin-transform-for-of-7.13.0" - sources."@babel/plugin-transform-function-name-7.12.13" - sources."@babel/plugin-transform-literals-7.12.13" - sources."@babel/plugin-transform-member-expression-literals-7.12.13" - sources."@babel/plugin-transform-modules-amd-7.14.2" - sources."@babel/plugin-transform-modules-commonjs-7.14.0" - sources."@babel/plugin-transform-modules-systemjs-7.13.8" - sources."@babel/plugin-transform-modules-umd-7.14.0" - sources."@babel/plugin-transform-named-capturing-groups-regex-7.12.13" - sources."@babel/plugin-transform-new-target-7.12.13" - sources."@babel/plugin-transform-object-super-7.12.13" - sources."@babel/plugin-transform-parameters-7.14.2" - sources."@babel/plugin-transform-property-literals-7.12.13" - sources."@babel/plugin-transform-react-display-name-7.14.2" - sources."@babel/plugin-transform-react-jsx-7.14.3" - sources."@babel/plugin-transform-react-jsx-development-7.12.17" - sources."@babel/plugin-transform-react-pure-annotations-7.12.1" - sources."@babel/plugin-transform-regenerator-7.13.15" - sources."@babel/plugin-transform-reserved-words-7.12.13" - (sources."@babel/plugin-transform-runtime-7.14.3" // { + sources."@babel/plugin-syntax-private-property-in-object-7.14.5" + sources."@babel/plugin-syntax-top-level-await-7.14.5" + sources."@babel/plugin-transform-arrow-functions-7.14.5" + sources."@babel/plugin-transform-async-to-generator-7.14.5" + sources."@babel/plugin-transform-block-scoped-functions-7.14.5" + sources."@babel/plugin-transform-block-scoping-7.14.5" + sources."@babel/plugin-transform-classes-7.14.5" + sources."@babel/plugin-transform-computed-properties-7.14.5" + sources."@babel/plugin-transform-destructuring-7.14.7" + sources."@babel/plugin-transform-dotall-regex-7.14.5" + sources."@babel/plugin-transform-duplicate-keys-7.14.5" + sources."@babel/plugin-transform-exponentiation-operator-7.14.5" + sources."@babel/plugin-transform-for-of-7.14.5" + sources."@babel/plugin-transform-function-name-7.14.5" + sources."@babel/plugin-transform-literals-7.14.5" + sources."@babel/plugin-transform-member-expression-literals-7.14.5" + sources."@babel/plugin-transform-modules-amd-7.14.5" + sources."@babel/plugin-transform-modules-commonjs-7.14.5" + sources."@babel/plugin-transform-modules-systemjs-7.14.5" + sources."@babel/plugin-transform-modules-umd-7.14.5" + sources."@babel/plugin-transform-named-capturing-groups-regex-7.14.7" + sources."@babel/plugin-transform-new-target-7.14.5" + sources."@babel/plugin-transform-object-super-7.14.5" + sources."@babel/plugin-transform-parameters-7.14.5" + sources."@babel/plugin-transform-property-literals-7.14.5" + sources."@babel/plugin-transform-react-display-name-7.14.5" + sources."@babel/plugin-transform-react-jsx-7.14.5" + sources."@babel/plugin-transform-react-jsx-development-7.14.5" + sources."@babel/plugin-transform-react-pure-annotations-7.14.5" + sources."@babel/plugin-transform-regenerator-7.14.5" + sources."@babel/plugin-transform-reserved-words-7.14.5" + (sources."@babel/plugin-transform-runtime-7.14.5" // { dependencies = [ sources."semver-6.3.0" ]; }) - sources."@babel/plugin-transform-shorthand-properties-7.12.13" - sources."@babel/plugin-transform-spread-7.13.0" - sources."@babel/plugin-transform-sticky-regex-7.12.13" - sources."@babel/plugin-transform-template-literals-7.13.0" - sources."@babel/plugin-transform-typeof-symbol-7.12.13" - sources."@babel/plugin-transform-unicode-escapes-7.12.13" - sources."@babel/plugin-transform-unicode-regex-7.12.13" - (sources."@babel/preset-env-7.14.4" // { + sources."@babel/plugin-transform-shorthand-properties-7.14.5" + sources."@babel/plugin-transform-spread-7.14.6" + sources."@babel/plugin-transform-sticky-regex-7.14.5" + sources."@babel/plugin-transform-template-literals-7.14.5" + sources."@babel/plugin-transform-typeof-symbol-7.14.5" + sources."@babel/plugin-transform-unicode-escapes-7.14.5" + sources."@babel/plugin-transform-unicode-regex-7.14.5" + (sources."@babel/preset-env-7.14.7" // { dependencies = [ sources."semver-6.3.0" ]; }) sources."@babel/preset-modules-0.1.4" - sources."@babel/preset-react-7.13.13" + sources."@babel/preset-react-7.14.5" sources."@babel/preset-stage-0-7.8.3" - sources."@babel/register-7.13.16" - sources."@babel/runtime-7.14.0" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/register-7.14.5" + sources."@babel/runtime-7.14.6" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" sources."@reach/router-1.3.4" sources."@sindresorhus/is-0.7.0" sources."@types/glob-7.1.3" sources."@types/json-schema-7.0.7" sources."@types/minimatch-3.0.4" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/parse-json-4.0.0" sources."@types/q-1.5.4" sources."@webassemblyjs/ast-1.9.0" @@ -102262,7 +102502,7 @@ in sources."semver-6.3.0" ]; }) - sources."babel-plugin-polyfill-corejs3-0.2.2" + sources."babel-plugin-polyfill-corejs3-0.2.3" sources."babel-plugin-polyfill-regenerator-0.2.2" sources."babel-plugin-transform-react-remove-prop-types-0.4.24" sources."babel-plugin-universal-import-4.0.2" @@ -102356,7 +102596,7 @@ in sources."camel-case-3.0.0" sources."camelcase-5.3.1" sources."caniuse-api-3.0.0" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."case-sensitive-paths-webpack-plugin-2.4.0" sources."caw-2.0.1" (sources."chalk-2.4.2" // { @@ -102366,7 +102606,7 @@ in }) sources."chardet-0.7.0" sources."check-types-8.0.3" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."chownr-1.1.4" sources."chrome-trace-event-1.0.3" sources."cipher-base-1.0.4" @@ -102429,19 +102669,19 @@ in }) sources."concat-map-0.0.1" sources."concat-stream-1.6.2" - sources."config-chain-1.1.12" + sources."config-chain-1.1.13" sources."connect-history-api-fallback-1.6.0" sources."console-browserify-1.2.0" sources."constants-browserify-1.0.0" sources."content-disposition-0.5.3" sources."content-type-1.0.4" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."cookie-0.4.1" sources."cookie-signature-1.0.6" sources."copy-concurrently-1.0.5" sources."copy-descriptor-0.1.1" sources."core-js-2.6.12" - (sources."core-js-compat-3.13.1" // { + (sources."core-js-compat-3.15.1" // { dependencies = [ sources."semver-7.0.0" ]; @@ -102566,7 +102806,11 @@ in }) sources."domain-browser-1.2.0" sources."domelementtype-1.3.1" - sources."domhandler-2.4.2" + (sources."domhandler-4.2.0" // { + dependencies = [ + sources."domelementtype-2.2.0" + ]; + }) sources."domutils-1.7.0" sources."dot-prop-5.3.0" (sources."download-7.1.0" // { @@ -102581,7 +102825,7 @@ in sources."duplexify-3.7.1" sources."ee-first-1.1.1" sources."ejs-2.7.4" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" (sources."elliptic-6.5.4" // { dependencies = [ sources."bn.js-4.12.0" @@ -102806,10 +103050,11 @@ in sources."loader-utils-0.2.17" ]; }) - (sources."htmlparser2-3.10.1" // { + (sources."htmlparser2-6.1.0" // { dependencies = [ - sources."entities-1.1.2" - sources."readable-stream-3.6.0" + sources."dom-serializer-1.3.2" + sources."domelementtype-2.2.0" + sources."domutils-2.7.0" ]; }) sources."http-cache-semantics-3.8.1" @@ -102848,7 +103093,7 @@ in sources."inherits-2.0.4" sources."ini-1.3.8" sources."inquirer-6.5.2" - (sources."inquirer-autocomplete-prompt-1.3.0" // { + (sources."inquirer-autocomplete-prompt-1.4.0" // { dependencies = [ sources."ansi-escapes-4.3.2" sources."ansi-styles-4.3.0" @@ -102979,11 +103224,7 @@ in }) sources."mime-2.5.2" sources."mime-db-1.48.0" - (sources."mime-types-2.1.30" // { - dependencies = [ - sources."mime-db-1.47.0" - ]; - }) + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."mimic-response-1.0.1" sources."minimalistic-assert-1.0.1" @@ -103024,7 +103265,7 @@ in ]; }) sources."node-modules-regexp-1.0.0" - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" sources."normalize-path-3.0.0" sources."normalize-range-0.1.2" (sources."normalize-url-2.0.1" // { @@ -103069,7 +103310,7 @@ in sources."onetime-2.0.1" sources."opener-1.5.2" sources."opn-5.5.0" - sources."optimize-css-assets-webpack-plugin-5.0.6" + sources."optimize-css-assets-webpack-plugin-5.0.8" sources."original-1.0.2" sources."os-browserify-0.3.0" sources."os-tmpdir-1.0.2" @@ -103118,7 +103359,7 @@ in ]; }) sources."posix-character-classes-0.1.1" - (sources."postcss-7.0.35" // { + (sources."postcss-7.0.36" // { dependencies = [ sources."source-map-0.6.1" ]; @@ -103294,7 +103535,7 @@ in sources."react-side-effect-2.1.1" sources."react-universal-component-4.5.0" sources."readable-stream-2.3.7" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."regenerate-1.4.2" sources."regenerate-unicode-properties-8.2.0" sources."regenerator-runtime-0.13.8" @@ -103312,9 +103553,15 @@ in }) sources."relateurl-0.2.7" sources."remove-trailing-separator-1.1.0" - (sources."renderkid-2.0.5" // { + (sources."renderkid-2.0.7" // { dependencies = [ sources."ansi-regex-2.1.1" + sources."css-select-4.1.3" + sources."css-what-5.0.1" + sources."dom-serializer-1.3.2" + sources."domelementtype-2.2.0" + sources."domutils-2.7.0" + sources."nth-check-2.0.0" sources."strip-ansi-3.0.1" ]; }) @@ -103684,7 +103931,7 @@ in dependencies = [ sources."acorn-7.4.1" sources."commander-2.20.3" - sources."ws-6.2.1" + sources."ws-6.2.2" ]; }) (sources."webpack-dev-middleware-3.7.3" // { @@ -103720,7 +103967,7 @@ in sources."semver-6.3.0" sources."strip-ansi-3.0.1" sources."to-regex-range-2.1.1" - sources."ws-6.2.1" + sources."ws-6.2.2" ]; }) sources."webpack-flush-chunks-2.0.3" @@ -103835,7 +104082,7 @@ in sources."@mozilla/readability-0.4.1" sources."@tootallnate/once-1.1.2" sources."abab-2.0.5" - sources."acorn-8.3.0" + sources."acorn-8.4.0" (sources."acorn-globals-6.0.0" // { dependencies = [ sources."acorn-7.4.1" @@ -103859,7 +104106,7 @@ in }) sources."data-urls-2.0.0" sources."debug-4.3.2" - sources."decimal.js-10.2.1" + sources."decimal.js-10.3.0" sources."deep-is-0.1.3" sources."delayed-stream-1.0.0" (sources."domexception-2.0.1" // { @@ -103886,8 +104133,8 @@ in sources."jsdom-16.6.0" sources."levn-0.3.0" sources."lodash-4.17.21" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."ms-2.1.2" sources."nwsapi-2.2.0" sources."optionator-0.8.3" @@ -103911,15 +104158,15 @@ in sources."webidl-conversions-6.1.0" sources."whatwg-encoding-1.0.5" sources."whatwg-mimetype-2.3.0" - sources."whatwg-url-8.5.0" + sources."whatwg-url-8.6.0" sources."word-wrap-1.2.3" sources."wrap-ansi-7.0.0" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xml-name-validator-3.0.0" sources."xmlchars-2.2.0" sources."y18n-5.0.8" sources."yargs-17.0.1" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -103934,50 +104181,45 @@ in redoc-cli = nodeEnv.buildNodePackage { name = "redoc-cli"; packageName = "redoc-cli"; - version = "0.11.4"; + version = "0.12.1"; src = fetchurl { - url = "https://registry.npmjs.org/redoc-cli/-/redoc-cli-0.11.4.tgz"; - sha512 = "Ke/Lvy9fwLuZGpeILZfJOyBtwGhgOFLQdptAf0LdGt9l44DfwGVw7ppaqXoJEr1rXyu2eO0UtH2UnG5/CCigVw=="; + url = "https://registry.npmjs.org/redoc-cli/-/redoc-cli-0.12.1.tgz"; + sha512 = "Ew8ByEayRBZgG9iLv2ZO+h3ZMz55naz1jA1CPt6Vm0xcSbVNYb7ubnbHhSvUGshc2bGu8Je74k1veFZZqXjBeQ=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - (sources."@babel/generator-7.14.3" // { + sources."@babel/code-frame-7.14.5" + (sources."@babel/generator-7.14.5" // { dependencies = [ sources."source-map-0.5.7" ]; }) - sources."@babel/helper-annotate-as-pure-7.12.13" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/highlight-7.14.0" - sources."@babel/parser-7.14.4" - sources."@babel/runtime-7.14.0" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" + sources."@babel/helper-annotate-as-pure-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/highlight-7.14.5" + sources."@babel/parser-7.14.7" + sources."@babel/runtime-7.14.6" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" sources."@emotion/is-prop-valid-0.8.8" sources."@emotion/memoize-0.7.4" sources."@emotion/stylis-0.8.5" sources."@emotion/unitless-0.7.5" sources."@exodus/schemasafe-1.0.0-rc.3" sources."@redocly/ajv-6.12.4" - (sources."@redocly/openapi-core-1.0.0-beta.49" // { + (sources."@redocly/openapi-core-1.0.0-beta.50" // { dependencies = [ - sources."@types/node-14.17.1" + sources."@types/node-14.17.4" ]; }) - sources."@redocly/react-dropdown-aria-2.0.11" + sources."@redocly/react-dropdown-aria-2.0.12" sources."@types/json-schema-7.0.7" - sources."@types/node-13.13.52" - (sources."ajv-5.5.2" // { - dependencies = [ - sources."fast-deep-equal-1.1.0" - sources."json-schema-traverse-0.3.1" - ]; - }) + sources."@types/node-15.12.4" sources."ansi-regex-5.0.0" sources."ansi-styles-3.2.1" sources."anymatch-3.1.2" @@ -103996,7 +104238,6 @@ in sources."babel-plugin-syntax-jsx-6.18.0" sources."balanced-match-1.0.2" sources."base64-js-1.5.1" - sources."better-ajv-errors-0.6.7" sources."binary-extensions-2.2.0" sources."bn.js-5.2.0" sources."brace-expansion-1.1.11" @@ -104021,24 +104262,20 @@ in sources."buffer-xor-1.0.3" sources."builtin-status-codes-3.0.0" sources."call-me-maybe-1.0.1" - sources."camelcase-5.3.1" sources."camelize-1.0.0" sources."chalk-2.4.2" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."cipher-base-1.0.4" sources."classnames-2.3.1" sources."clipboard-2.0.8" sources."cliui-7.0.4" sources."clsx-1.1.1" - sources."co-4.6.0" - sources."code-error-fragment-0.0.230" sources."color-convert-1.9.3" sources."color-name-1.1.3" sources."colorette-1.2.2" sources."concat-map-0.0.1" sources."console-browserify-1.2.0" sources."constants-browserify-1.0.0" - sources."core-js-3.13.1" sources."core-util-is-1.0.2" (sources."create-ecdh-4.0.4" // { dependencies = [ @@ -104051,7 +104288,6 @@ in sources."css-color-keywords-1.0.0" sources."css-to-react-native-3.0.0" sources."debug-4.3.2" - sources."decamelize-1.2.0" sources."decko-1.2.0" sources."delegate-3.2.0" sources."des.js-1.0.1" @@ -104080,14 +104316,12 @@ in sources."fast-json-stable-stringify-2.1.0" sources."fast-safe-stringify-2.0.7" sources."fill-range-7.0.1" - sources."find-up-4.1.0" sources."foreach-2.0.5" sources."fsevents-2.3.2" sources."get-caller-file-2.0.5" sources."glob-parent-5.1.2" sources."globals-11.12.0" sources."good-listener-1.2.2" - sources."grapheme-splitter-1.0.4" sources."handlebars-4.7.7" sources."has-flag-3.0.0" (sources."hash-base-3.1.0" // { @@ -104119,18 +104353,14 @@ in sources."jsesc-2.5.2" sources."json-pointer-0.6.1" sources."json-schema-traverse-0.4.1" - sources."json-to-ast-2.1.0" - sources."jsonpointer-4.1.0" - sources."leven-3.1.0" - sources."locate-path-5.0.0" sources."lodash-4.17.21" sources."lodash.isequal-4.5.0" sources."loose-envify-1.4.0" - sources."lunr-2.3.8" + sources."lunr-2.3.9" sources."mark.js-8.11.1" sources."marked-0.7.0" sources."md5.js-1.3.5" - sources."memoize-one-5.1.1" + sources."memoize-one-5.2.1" (sources."miller-rabin-4.0.1" // { dependencies = [ sources."bn.js-4.12.0" @@ -104153,27 +104383,19 @@ in sources."normalize-path-3.0.0" sources."oas-kit-common-1.0.8" sources."oas-linter-3.2.2" - (sources."oas-resolver-2.5.5" // { - dependencies = [ - sources."yargs-17.0.1" - ]; - }) + sources."oas-resolver-2.5.5" sources."oas-schema-walker-1.1.5" - sources."oas-validator-4.0.8" + sources."oas-validator-5.0.7" sources."object-assign-4.1.1" sources."openapi-sampler-1.0.1" sources."os-browserify-0.3.0" - sources."p-limit-2.3.0" - sources."p-locate-4.1.0" - sources."p-try-2.2.0" sources."pako-1.0.11" sources."parse-asn1-5.1.6" sources."path-browserify-0.0.1" - sources."path-exists-4.0.0" sources."pbkdf2-3.1.2" sources."perfect-scrollbar-1.5.1" sources."picomatch-2.3.0" - sources."polished-3.7.2" + sources."polished-4.1.3" sources."postcss-value-parser-4.1.0" sources."prismjs-1.23.0" sources."process-0.11.10" @@ -104189,8 +104411,8 @@ in sources."querystring-es3-0.2.1" sources."randombytes-2.1.0" sources."randomfill-1.0.4" - sources."react-16.14.0" - sources."react-dom-16.14.0" + sources."react-17.0.2" + sources."react-dom-17.0.2" sources."react-is-16.13.1" sources."react-tabs-3.2.2" (sources."readable-stream-2.3.7" // { @@ -104201,18 +104423,20 @@ in sources."string_decoder-1.1.1" ]; }) - sources."readdirp-3.5.0" - sources."redoc-2.0.0-rc.53" + sources."readdirp-3.6.0" + (sources."redoc-2.0.0-rc.54" // { + dependencies = [ + sources."path-browserify-1.0.1" + ]; + }) sources."reftools-1.1.8" sources."regenerator-runtime-0.13.8" sources."require-directory-2.1.1" - sources."require-main-filename-2.0.0" sources."ripemd160-2.0.2" sources."safe-buffer-5.2.1" sources."safer-buffer-2.1.2" - sources."scheduler-0.19.1" + sources."scheduler-0.20.2" sources."select-1.1.2" - sources."set-blocking-2.0.0" sources."setimmediate-1.0.5" sources."sha.js-2.4.11" sources."shallowequal-1.1.0" @@ -104222,7 +104446,7 @@ in sources."should-type-1.4.0" sources."should-type-adaptors-1.1.0" sources."should-util-1.0.1" - sources."slugify-1.5.3" + sources."slugify-1.4.7" sources."source-map-0.6.1" sources."sprintf-js-1.0.3" sources."stickyfill-1.1.1" @@ -104233,15 +104457,14 @@ in sources."strip-ansi-6.0.0" sources."styled-components-5.3.0" sources."supports-color-5.5.0" - sources."swagger2openapi-6.2.3" + sources."swagger2openapi-7.0.7" sources."timers-browserify-2.0.12" sources."tiny-emitter-2.1.0" sources."to-arraybuffer-1.0.1" sources."to-fast-properties-2.0.0" sources."to-regex-range-5.0.1" - sources."tslib-2.2.0" sources."tty-browserify-0.0.0" - sources."uglify-js-3.13.8" + sources."uglify-js-3.13.9" (sources."uri-js-4.4.1" // { dependencies = [ sources."punycode-2.1.1" @@ -104260,7 +104483,6 @@ in }) sources."util-deprecate-1.0.2" sources."vm-browserify-1.1.2" - sources."which-module-2.0.0" sources."wordwrap-1.0.0" (sources."wrap-ansi-7.0.0" // { dependencies = [ @@ -104273,18 +104495,8 @@ in sources."y18n-5.0.8" sources."yaml-1.10.2" sources."yaml-ast-parser-0.0.43" - (sources."yargs-15.4.1" // { - dependencies = [ - sources."ansi-styles-4.3.0" - sources."cliui-6.0.0" - sources."color-convert-2.0.1" - sources."color-name-1.1.4" - sources."wrap-ansi-6.2.0" - sources."y18n-4.0.3" - sources."yargs-parser-18.1.3" - ]; - }) - sources."yargs-parser-20.2.7" + sources."yargs-17.0.1" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -104439,10 +104651,10 @@ in "reveal.js" = nodeEnv.buildNodePackage { name = "reveal.js"; packageName = "reveal.js"; - version = "4.1.1"; + version = "4.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/reveal.js/-/reveal.js-4.1.1.tgz"; - sha512 = "Ol+/3LF4sZKQQOaG7/Jsa7t5Kix1I+dx9UEYL8mOOn2sWROtLcbI3AGHZbNQPWeuvnQ/y1R3MJ0vN9ZI5nBPUg=="; + url = "https://registry.npmjs.org/reveal.js/-/reveal.js-4.1.3.tgz"; + sha512 = "5VbL4nVDUedVKnOIIM3UQAIUlp+CvR/SrUkrN5GDoVfcWJAxH2oIh7PWyShy7+pE7tgkH2q+3e5EikGRpgE+oA=="; }; buildInputs = globalBuildInputs; meta = { @@ -104488,10 +104700,10 @@ in rollup = nodeEnv.buildNodePackage { name = "rollup"; packageName = "rollup"; - version = "2.50.5"; + version = "2.52.2"; src = fetchurl { - url = "https://registry.npmjs.org/rollup/-/rollup-2.50.5.tgz"; - sha512 = "Ztz4NurU2LbS3Jn5rlhnYv35z6pkjBUmYKr94fOBIKINKRO6kug9NTFHArT7jqwMP2kqEZ39jJuEtkk91NBltQ=="; + url = "https://registry.npmjs.org/rollup/-/rollup-2.52.2.tgz"; + sha512 = "4RlFC3k2BIHlUsJ9mGd8OO+9Lm2eDF5P7+6DNQOp5sx+7N/1tFM01kELfbxlMX3MxT6owvLB1ln4S3QvvQlbUA=="; }; dependencies = [ sources."fsevents-2.3.2" @@ -104513,22 +104725,21 @@ in src = ../../misc/vscode-extensions/rust-analyzer/build-deps; dependencies = [ sources."@babel/code-frame-7.12.11" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" sources."escape-string-regexp-1.0.5" ]; }) - (sources."@eslint/eslintrc-0.4.1" // { + (sources."@eslint/eslintrc-0.4.2" // { dependencies = [ - sources."globals-12.4.0" sources."ignore-4.0.6" ]; }) - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."@rollup/plugin-commonjs-17.1.0" sources."@rollup/plugin-node-resolve-11.2.1" (sources."@rollup/pluginutils-3.1.0" // { @@ -104545,14 +104756,14 @@ in sources."@types/node-12.12.70" sources."@types/node-fetch-2.5.10" sources."@types/resolve-1.17.1" - sources."@types/vscode-1.56.0" - sources."@typescript-eslint/eslint-plugin-4.26.0" - sources."@typescript-eslint/experimental-utils-4.26.0" - sources."@typescript-eslint/parser-4.26.0" - sources."@typescript-eslint/scope-manager-4.26.0" - sources."@typescript-eslint/types-4.26.0" - sources."@typescript-eslint/typescript-estree-4.26.0" - sources."@typescript-eslint/visitor-keys-4.26.0" + sources."@types/vscode-1.57.0" + sources."@typescript-eslint/eslint-plugin-4.28.0" + sources."@typescript-eslint/experimental-utils-4.28.0" + sources."@typescript-eslint/parser-4.28.0" + sources."@typescript-eslint/scope-manager-4.28.0" + sources."@typescript-eslint/types-4.28.0" + sources."@typescript-eslint/typescript-estree-4.28.0" + sources."@typescript-eslint/visitor-keys-4.28.0" sources."@ungap/promise-all-settled-1.1.2" sources."acorn-7.4.1" sources."acorn-jsx-5.3.1" @@ -104593,8 +104804,8 @@ in sources."supports-color-7.2.0" ]; }) - sources."cheerio-1.0.0-rc.9" - sources."cheerio-select-1.4.0" + sources."cheerio-1.0.0-rc.10" + sources."cheerio-select-1.5.0" sources."chokidar-3.5.1" sources."cliui-7.0.4" sources."color-convert-1.9.3" @@ -104606,7 +104817,7 @@ in sources."concat-map-0.0.1" sources."core-util-is-1.0.2" sources."cross-spawn-7.0.3" - sources."css-select-4.1.2" + sources."css-select-4.1.3" sources."css-what-5.0.1" sources."debug-4.3.2" sources."decamelize-4.0.0" @@ -104620,7 +104831,7 @@ in sources."dom-serializer-1.3.2" sources."domelementtype-2.2.0" sources."domhandler-4.2.0" - sources."domutils-2.6.0" + sources."domutils-2.7.0" sources."duplexer2-0.1.4" (sources."editorconfig-0.15.3" // { dependencies = [ @@ -104634,7 +104845,7 @@ in sources."entities-2.2.0" sources."escalade-3.1.1" sources."escape-string-regexp-4.0.0" - (sources."eslint-7.27.0" // { + (sources."eslint-7.29.0" // { dependencies = [ (sources."eslint-utils-2.1.0" // { dependencies = [ @@ -104692,12 +104903,8 @@ in sources."get-intrinsic-1.1.1" sources."glob-7.1.7" sources."glob-parent-5.1.2" - (sources."globals-13.9.0" // { - dependencies = [ - sources."type-fest-0.20.2" - ]; - }) - sources."globby-11.0.3" + sources."globals-13.9.0" + sources."globby-11.0.4" sources."graceful-fs-4.2.6" sources."growl-1.10.5" sources."has-1.0.3" @@ -104748,8 +104955,8 @@ in sources."merge2-1.4.1" sources."micromatch-4.0.4" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."minimist-1.2.5" sources."mkdirp-0.5.5" @@ -104813,14 +105020,14 @@ in ]; }) sources."readdirp-3.5.0" - sources."regexpp-3.1.0" + sources."regexpp-3.2.0" sources."require-directory-2.1.1" sources."require-from-string-2.0.2" sources."resolve-1.20.0" sources."resolve-from-4.0.0" sources."reusify-1.0.4" sources."rimraf-3.0.2" - sources."rollup-2.50.5" + sources."rollup-2.52.2" sources."run-parallel-1.2.0" sources."safe-buffer-5.2.1" sources."semver-7.3.5" @@ -104851,7 +105058,7 @@ in sources."supports-color-5.5.0" (sources."table-6.7.1" // { dependencies = [ - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."json-schema-traverse-1.0.0" ]; }) @@ -104859,7 +105066,7 @@ in sources."tmp-0.0.29" sources."to-regex-range-5.0.1" sources."traverse-0.3.9" - sources."tslib-2.2.0" + sources."tslib-2.3.0" (sources."tsutils-3.21.0" // { dependencies = [ sources."tslib-1.14.1" @@ -104867,9 +105074,9 @@ in }) sources."tunnel-0.0.6" sources."type-check-0.4.0" - sources."type-fest-0.8.1" + sources."type-fest-0.20.2" sources."typed-rest-client-1.8.4" - sources."typescript-4.3.2" + sources."typescript-4.3.4" sources."typescript-formatter-7.2.2" sources."uc.micro-1.0.6" sources."underscore-1.13.1" @@ -104878,7 +105085,7 @@ in sources."url-join-1.1.0" sources."util-deprecate-1.0.2" sources."v8-compile-cache-2.3.0" - (sources."vsce-1.91.0" // { + (sources."vsce-1.88.0" // { dependencies = [ sources."chalk-2.4.2" sources."commander-6.2.1" @@ -104886,10 +105093,10 @@ in sources."semver-5.7.1" ]; }) - sources."vscode-jsonrpc-6.1.0-next.2" - sources."vscode-languageclient-7.1.0-next.4" - sources."vscode-languageserver-protocol-3.17.0-next.5" - sources."vscode-languageserver-types-3.17.0-next.1" + sources."vscode-jsonrpc-7.0.0-next.1" + sources."vscode-languageclient-7.1.0-next.5" + sources."vscode-languageserver-protocol-3.17.0-next.6" + sources."vscode-languageserver-types-3.17.0-next.2" sources."vscode-test-1.5.2" sources."which-2.0.2" (sources."wide-align-1.1.3" // { @@ -105006,8 +105213,8 @@ in sources."keypress-0.1.0" sources."methods-0.1.0" sources."mime-1.2.11" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mkdirp-0.3.5" sources."ms-2.1.2" sources."multiparty-2.2.0" @@ -105061,16 +105268,16 @@ in sass = nodeEnv.buildNodePackage { name = "sass"; packageName = "sass"; - version = "1.34.0"; + version = "1.35.1"; src = fetchurl { - url = "https://registry.npmjs.org/sass/-/sass-1.34.0.tgz"; - sha512 = "rHEN0BscqjUYuomUEaqq3BMgsXqQfkcMVR7UhscsAVub0/spUrZGBMxQXFS2kfiDsPLZw5yuU9iJEFNC2x38Qw=="; + url = "https://registry.npmjs.org/sass/-/sass-1.35.1.tgz"; + sha512 = "oCisuQJstxMcacOPmxLNiLlj4cUyN2+8xJnG7VanRoh2GOLr9RqkvI4AxA4a6LHVg/rsu+PmxXeGhrdSF9jCiQ=="; }; dependencies = [ sources."anymatch-3.1.2" sources."binary-extensions-2.2.0" sources."braces-3.0.2" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."fill-range-7.0.1" sources."fsevents-2.3.2" sources."glob-parent-5.1.2" @@ -105080,7 +105287,7 @@ in sources."is-number-7.0.0" sources."normalize-path-3.0.0" sources."picomatch-2.3.0" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."to-regex-range-5.0.1" ]; buildInputs = globalBuildInputs; @@ -105118,15 +105325,15 @@ in serve = nodeEnv.buildNodePackage { name = "serve"; packageName = "serve"; - version = "11.3.2"; + version = "12.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/serve/-/serve-11.3.2.tgz"; - sha512 = "yKWQfI3xbj/f7X1lTBg91fXBP0FqjJ4TEi+ilES5yzH0iKJpN5LjNb1YzIfQg9Rqn4ECUS2SOf2+Kmepogoa5w=="; + url = "https://registry.npmjs.org/serve/-/serve-12.0.0.tgz"; + sha512 = "BkTsETQYynAZ7rXX414kg4X6EvuZQS3UVs1NY0VQYdRHSTYWPYcH38nnDh48D0x6ONuislgjag8uKlU2gTBImA=="; }; dependencies = [ sources."@zeit/schemas-2.6.0" sources."accepts-1.3.7" - sources."ajv-6.5.3" + sources."ajv-6.12.6" sources."ansi-align-2.0.0" sources."ansi-regex-3.0.0" sources."ansi-styles-3.2.1" @@ -105139,9 +105346,11 @@ in sources."camelcase-4.1.0" sources."chalk-2.4.1" sources."cli-boxes-1.0.0" - (sources."clipboardy-1.2.3" // { + (sources."clipboardy-2.3.0" // { dependencies = [ - sources."execa-0.8.0" + sources."cross-spawn-6.0.5" + sources."execa-1.0.0" + sources."get-stream-4.1.0" ]; }) sources."color-convert-1.9.3" @@ -105153,9 +105362,10 @@ in sources."cross-spawn-5.1.0" sources."debug-2.6.9" sources."deep-extend-0.6.0" + sources."end-of-stream-1.4.4" sources."escape-string-regexp-1.0.5" sources."execa-0.7.0" - sources."fast-deep-equal-2.0.1" + sources."fast-deep-equal-3.1.3" sources."fast-json-stable-stringify-2.1.0" (sources."fast-url-parser-1.1.3" // { dependencies = [ @@ -105165,30 +105375,36 @@ in sources."get-stream-3.0.0" sources."has-flag-3.0.0" sources."ini-1.3.8" + sources."is-docker-2.2.1" sources."is-fullwidth-code-point-2.0.0" sources."is-stream-1.1.0" + sources."is-wsl-2.2.0" sources."isexe-2.0.0" sources."json-schema-traverse-0.4.1" sources."lru-cache-4.1.5" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."minimist-1.2.5" sources."ms-2.0.0" sources."negotiator-0.6.2" + sources."nice-try-1.0.5" sources."npm-run-path-2.0.2" sources."on-headers-1.0.2" + sources."once-1.4.0" sources."p-finally-1.0.0" sources."path-is-inside-1.0.2" sources."path-key-2.0.1" sources."path-to-regexp-2.2.1" sources."pseudomap-1.0.2" + sources."pump-3.0.0" sources."punycode-2.1.1" sources."range-parser-1.2.0" sources."rc-1.2.8" sources."registry-auth-token-3.3.2" sources."registry-url-3.1.0" sources."safe-buffer-5.1.2" + sources."semver-5.7.1" (sources."serve-handler-6.1.3" // { dependencies = [ sources."mime-db-1.33.0" @@ -105209,12 +105425,13 @@ in sources."vary-1.1.2" sources."which-1.3.1" sources."widest-line-2.0.1" + sources."wrappy-1.0.2" sources."yallist-2.1.2" ]; buildInputs = globalBuildInputs; meta = { description = "Static file serving and directory listing"; - homepage = "https://github.com/zeit/serve#readme"; + homepage = "https://github.com/vercel/serve#readme"; license = "MIT"; }; production = true; @@ -105224,10 +105441,10 @@ in serverless = nodeEnv.buildNodePackage { name = "serverless"; packageName = "serverless"; - version = "2.43.1"; + version = "2.48.0"; src = fetchurl { - url = "https://registry.npmjs.org/serverless/-/serverless-2.43.1.tgz"; - sha512 = "KasMG0u78+QBMecuT1Cit3PdHA1Wl6xyjrWgFEdtJnI5mBcMA9FZVMvdqRk1VjaQtnvNJfpbzfJa6Aj2rrqXWQ=="; + url = "https://registry.npmjs.org/serverless/-/serverless-2.48.0.tgz"; + sha512 = "1CGCKr+7226psdyuGYFC54khCMUUBlLt2QPEAZtY00ZHMy8yOxvjMXAdfHAVnCdo+YH419MW3jFJhGuwVUsDyw=="; }; dependencies = [ sources."2-thenable-1.0.0" @@ -105238,9 +105455,9 @@ in ]; }) sources."@kwsites/promise-deferred-1.1.1" - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."@protobufjs/aspromise-1.1.2" sources."@protobufjs/base64-1.1.2" sources."@protobufjs/codegen-2.0.4" @@ -105260,7 +105477,7 @@ in ]; }) sources."@serverless/component-metrics-1.0.8" - (sources."@serverless/components-3.10.1" // { + (sources."@serverless/components-3.12.0" // { dependencies = [ (sources."@serverless/utils-4.1.0" // { dependencies = [ @@ -105288,36 +105505,36 @@ in sources."semver-6.3.0" ]; }) - sources."@serverless/dashboard-plugin-5.1.4" + sources."@serverless/dashboard-plugin-5.4.2" sources."@serverless/event-mocks-1.1.1" - (sources."@serverless/platform-client-4.2.2" // { + (sources."@serverless/platform-client-4.2.3" // { dependencies = [ sources."adm-zip-0.4.16" sources."js-yaml-3.14.1" ]; }) - (sources."@serverless/platform-client-china-2.1.13" // { + (sources."@serverless/platform-client-china-2.1.14" // { dependencies = [ sources."dotenv-8.6.0" sources."js-yaml-3.14.1" ]; }) sources."@serverless/template-1.1.4" - (sources."@serverless/utils-5.2.0" // { + (sources."@serverless/utils-5.3.0" // { dependencies = [ sources."get-stream-6.0.1" sources."jwt-decode-3.1.2" sources."write-file-atomic-3.0.3" ]; }) - sources."@serverless/utils-china-1.1.0" + sources."@serverless/utils-china-1.1.2" sources."@sindresorhus/is-0.14.0" sources."@szmarczak/http-timer-1.1.2" sources."@tencent-sdk/capi-1.1.8" sources."@tencent-sdk/cls-0.2.1" (sources."@tencent-sdk/common-0.1.0" // { dependencies = [ - sources."type-fest-1.2.0" + sources."type-fest-1.2.1" ]; }) sources."@tencent-sdk/faas-0.1.5" @@ -105329,7 +105546,7 @@ in sources."@types/keyv-3.1.1" sources."@types/lodash-4.14.170" sources."@types/long-4.0.1" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/readable-stream-2.3.10" sources."@types/request-2.48.5" sources."@types/request-promise-native-1.0.17" @@ -105391,7 +105608,7 @@ in sources."async-2.6.3" sources."asynckit-0.4.0" sources."at-least-node-1.0.0" - (sources."aws-sdk-2.918.0" // { + (sources."aws-sdk-2.932.0" // { dependencies = [ sources."buffer-4.9.2" sources."ieee754-1.1.13" @@ -105471,7 +105688,7 @@ in }) sources."chardet-0.7.0" sources."child-process-ext-2.1.1" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."chownr-1.1.4" sources."ci-info-3.2.0" sources."cli-boxes-2.2.1" @@ -105563,7 +105780,7 @@ in sources."dijkstrajs-1.0.2" sources."dir-glob-3.0.1" sources."dot-qs-0.2.0" - sources."dotenv-9.0.2" + sources."dotenv-10.0.0" sources."duplexer3-0.1.4" sources."duplexify-4.1.1" sources."duration-0.2.2" @@ -105574,6 +105791,7 @@ in (sources."engine.io-client-3.5.2" // { dependencies = [ sources."debug-3.1.0" + sources."ws-7.4.6" ]; }) sources."engine.io-parser-2.2.1" @@ -105646,12 +105864,12 @@ in sources."github-from-package-0.0.0" sources."glob-7.1.7" sources."glob-parent-5.1.2" - sources."globby-11.0.3" + sources."globby-11.0.4" (sources."got-11.8.2" // { dependencies = [ sources."@sindresorhus/is-4.0.1" sources."@szmarczak/http-timer-4.0.5" - sources."cacheable-request-7.0.1" + sources."cacheable-request-7.0.2" sources."decompress-response-6.0.0" sources."defer-to-connect-2.0.1" sources."get-stream-5.2.0" @@ -105659,6 +105877,7 @@ in sources."keyv-4.0.3" sources."lowercase-keys-2.0.0" sources."mimic-response-3.1.0" + sources."normalize-url-6.1.0" sources."p-cancelable-2.1.1" sources."responselike-2.0.0" ]; @@ -105701,7 +105920,7 @@ in sources."strip-ansi-6.0.0" ]; }) - sources."inquirer-autocomplete-prompt-1.3.0" + sources."inquirer-autocomplete-prompt-1.4.0" sources."is-arrayish-0.3.2" sources."is-binary-path-2.1.0" sources."is-docker-2.2.1" @@ -105797,8 +106016,8 @@ in sources."methods-1.1.2" sources."micromatch-4.0.4" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -105891,7 +106110,7 @@ in sources."readable-stream-3.6.0" sources."readable-web-to-node-stream-3.0.1" sources."readdir-glob-1.1.1" - sources."readdirp-3.5.0" + sources."readdirp-3.6.0" sources."registry-auth-token-4.2.1" sources."registry-url-5.1.0" sources."replaceall-0.1.6" @@ -105925,7 +106144,7 @@ in sources."signal-exit-3.0.3" sources."simple-concat-1.0.1" sources."simple-get-2.8.1" - (sources."simple-git-2.39.0" // { + (sources."simple-git-2.40.0" // { dependencies = [ sources."debug-4.3.2" sources."ms-2.1.2" @@ -106086,7 +106305,7 @@ in }) sources."wrappy-1.0.2" sources."write-file-atomic-2.4.3" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xml2js-0.4.19" sources."xmlbuilder-9.0.7" sources."xmlhttprequest-ssl-1.6.3" @@ -106233,8 +106452,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimist-1.2.5" sources."mkdirp-0.5.5" sources."moment-2.7.0" @@ -106735,43 +106954,45 @@ in snyk = nodeEnv.buildNodePackage { name = "snyk"; packageName = "snyk"; - version = "1.619.0"; + version = "1.642.0"; src = fetchurl { - url = "https://registry.npmjs.org/snyk/-/snyk-1.619.0.tgz"; - sha512 = "ZQFDU+WniTjD6Z1vqKQcBq50jJ9DWSBBCg0PNW54MZbK5oO+L2rHtbpaD3NI3lQI+AFCe64kdzkWMgsEemkFHQ=="; + url = "https://registry.npmjs.org/snyk/-/snyk-1.642.0.tgz"; + sha512 = "rrEZuPD1olFg8+MoNAHXeS+HuPQE/RpL4R2Yhizg/NIzYd/PC2peNx0jOOywqqqRseQY8Vhyr19KIrriFEIFJg=="; }; dependencies = [ sources."@arcanis/slice-ansi-1.0.2" sources."@deepcode/dcignore-1.0.2" - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."@octetstream/promisify-2.0.2" sources."@open-policy-agent/opa-wasm-1.2.0" sources."@sindresorhus/is-4.0.1" + sources."@snyk/child-process-0.3.1" sources."@snyk/cli-interface-2.11.0" sources."@snyk/cloud-config-parser-1.9.2" sources."@snyk/cocoapods-lockfile-parser-3.6.2" - (sources."@snyk/code-client-3.7.0" // { - dependencies = [ - sources."uuid-8.3.2" - ]; - }) + sources."@snyk/code-client-3.9.0" sources."@snyk/composer-lockfile-parser-1.4.1" (sources."@snyk/dep-graph-1.28.0" // { dependencies = [ sources."semver-7.3.5" ]; }) - sources."@snyk/docker-registry-v2-client-2.1.3" + sources."@snyk/docker-registry-v2-client-2.2.2" sources."@snyk/fast-glob-3.2.6-patch" - (sources."@snyk/fix-1.601.0" // { + (sources."@snyk/fix-1.642.0" // { dependencies = [ - sources."chalk-4.1.0" + sources."chalk-4.1.1" sources."strip-ansi-6.0.0" ]; }) - (sources."@snyk/fix-pipenv-pipfile-0.3.5" // { + (sources."@snyk/fix-pipenv-pipfile-0.5.4" // { + dependencies = [ + sources."debug-4.3.1" + ]; + }) + (sources."@snyk/fix-poetry-0.7.2" // { dependencies = [ sources."debug-4.3.1" ]; @@ -106794,13 +107015,13 @@ in }) (sources."@snyk/mix-parser-1.3.2" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."@snyk/rpm-parser-2.2.1" (sources."@snyk/snyk-cocoapods-plugin-2.5.2" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) (sources."@snyk/snyk-docker-pull-3.2.5" // { @@ -106810,7 +107031,7 @@ in }) (sources."@snyk/snyk-hex-plugin-1.1.4" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."@szmarczak/http-timer-4.0.5" @@ -106827,7 +107048,6 @@ in sources."@types/lodash.omit-4.5.6" sources."@types/lodash.union-4.6.6" sources."@types/minimatch-3.0.4" - sources."@types/multimatch-4.0.0" sources."@types/node-13.13.52" sources."@types/responselike-1.0.0" sources."@types/sarif-2.1.3" @@ -106893,7 +107113,7 @@ in sources."bcrypt-pbkdf-1.0.2" sources."binjumper-0.1.4" sources."bl-4.1.0" - sources."boolean-3.1.0" + sources."boolean-3.1.2" sources."bottleneck-2.19.5" (sources."boxen-5.0.1" // { dependencies = [ @@ -106910,7 +107130,7 @@ in sources."buffer-5.7.1" sources."buffer-from-1.1.1" sources."cacheable-lookup-5.0.4" - (sources."cacheable-request-7.0.1" // { + (sources."cacheable-request-7.0.2" // { dependencies = [ sources."get-stream-5.2.0" ]; @@ -106928,7 +107148,6 @@ in }) sources."chardet-0.7.0" sources."child-process-1.0.2" - sources."child_process-1.0.2" sources."chownr-2.0.0" sources."ci-info-2.0.0" sources."clean-stack-2.2.0" @@ -106944,7 +107163,7 @@ in sources."color-name-1.1.4" sources."concat-map-0.0.1" sources."configstore-5.0.1" - sources."core-js-3.13.1" + sources."core-js-3.15.1" sources."core-util-is-1.0.2" (sources."cross-spawn-6.0.5" // { dependencies = [ @@ -106962,6 +107181,11 @@ in sources."defaults-1.0.3" sources."defer-to-connect-2.0.1" sources."define-properties-1.1.3" + (sources."del-6.0.0" // { + dependencies = [ + sources."rimraf-3.0.2" + ]; + }) sources."detect-node-2.1.0" sources."diff-4.0.2" sources."dir-glob-3.0.1" @@ -106988,7 +107212,7 @@ in sources."esprima-4.0.1" (sources."event-loop-spinner-2.1.0" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."execa-1.0.0" @@ -107013,7 +107237,7 @@ in }) sources."global-dirs-3.0.0" sources."globalthis-1.0.2" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."got-11.8.2" sources."graceful-fs-4.2.6" sources."grapheme-splitter-1.0.4" @@ -107049,6 +107273,7 @@ in sources."is-npm-5.0.0" sources."is-number-7.0.0" sources."is-obj-2.0.0" + sources."is-path-cwd-2.2.0" sources."is-path-inside-3.0.3" sources."is-stream-1.1.0" sources."is-typedarray-1.0.0" @@ -107126,7 +107351,7 @@ in }) sources."lowercase-keys-2.0.0" sources."lru-cache-6.0.0" - sources."macos-release-2.4.1" + sources."macos-release-2.5.0" sources."make-dir-3.1.0" (sources."matcher-3.0.0" // { dependencies = [ @@ -107152,7 +107377,7 @@ in }) sources."nice-try-1.0.5" sources."node.extend-2.0.2" - sources."normalize-url-4.5.1" + sources."normalize-url-6.1.0" sources."npm-run-path-2.0.2" sources."object-hash-2.2.0" sources."object-keys-1.1.1" @@ -107189,6 +107414,7 @@ in sources."json-buffer-3.0.0" sources."keyv-3.1.0" sources."lowercase-keys-1.0.1" + sources."normalize-url-4.5.1" sources."p-cancelable-1.1.0" sources."responselike-1.0.2" ]; @@ -107259,7 +107485,7 @@ in (sources."snyk-cpp-plugin-2.2.1" // { dependencies = [ sources."chalk-4.1.1" - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) (sources."snyk-docker-plugin-4.20.8" // { @@ -107269,7 +107495,6 @@ in sources."semver-7.3.5" sources."snyk-nodejs-lockfile-parser-1.34.0" sources."tmp-0.2.1" - sources."uuid-8.3.2" ]; }) sources."snyk-go-parser-1.4.1" @@ -107284,11 +107509,11 @@ in sources."chalk-3.0.0" sources."rimraf-3.0.2" sources."tmp-0.2.1" - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) sources."snyk-module-3.1.0" - (sources."snyk-mvn-plugin-2.26.0" // { + (sources."snyk-mvn-plugin-2.26.1" // { dependencies = [ (sources."@snyk/java-call-graph-builder-1.21.0" // { dependencies = [ @@ -107309,7 +107534,6 @@ in sources."argparse-2.0.1" sources."js-yaml-4.1.0" sources."p-map-2.1.0" - sources."uuid-8.3.2" ]; }) (sources."snyk-nuget-plugin-1.21.1" // { @@ -107329,7 +107553,7 @@ in }) (sources."snyk-poetry-lockfile-parser-1.1.6" // { dependencies = [ - sources."tslib-2.2.0" + sources."tslib-2.3.0" ]; }) (sources."snyk-policy-1.19.0" // { @@ -107394,9 +107618,10 @@ in sources."tar-6.1.0" sources."tar-stream-2.2.0" sources."temp-dir-2.0.0" - (sources."tempfile-2.0.0" // { + (sources."tempy-1.0.1" // { dependencies = [ - sources."temp-dir-1.0.0" + sources."is-stream-2.0.0" + sources."type-fest-0.16.0" ]; }) sources."then-fs-2.0.0" @@ -107430,7 +107655,7 @@ in sources."url-parse-lax-3.0.0" sources."utf8-3.0.0" sources."util-deprecate-1.0.2" - sources."uuid-3.4.0" + sources."uuid-8.3.2" sources."vscode-languageserver-types-3.16.0" sources."wcwidth-1.0.1" sources."which-1.3.1" @@ -107479,7 +107704,7 @@ in sources."@types/component-emitter-1.2.10" sources."@types/cookie-0.4.0" sources."@types/cors-2.8.10" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."accepts-1.3.7" sources."base64-arraybuffer-0.1.4" sources."base64id-2.0.0" @@ -107489,8 +107714,8 @@ in sources."debug-4.3.2" sources."engine.io-5.1.1" sources."engine.io-parser-4.0.2" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."ms-2.1.2" sources."negotiator-0.6.2" sources."object-assign-4.1.1" @@ -107716,7 +107941,7 @@ in sources."array-unique-0.2.1" sources."arrify-1.0.1" sources."assign-symbols-1.0.0" - (sources."async-append-only-log-3.0.8" // { + (sources."async-append-only-log-3.0.9" // { dependencies = [ sources."push-stream-11.0.1" ]; @@ -108034,7 +108259,7 @@ in sources."is-symbol-1.0.4" sources."is-typed-array-1.1.5" sources."is-typedarray-1.0.0" - sources."is-valid-domain-0.0.19" + sources."is-valid-domain-0.0.20" sources."is-weakmap-2.0.1" sources."is-weakset-2.0.1" sources."is-windows-1.0.2" @@ -108216,8 +108441,8 @@ in sources."polyraf-1.1.0" sources."posix-character-classes-0.1.1" sources."preserve-0.2.0" - sources."prettier-2.3.0" - (sources."pretty-quick-3.1.0" // { + sources."prettier-2.3.1" + (sources."pretty-quick-3.1.1" // { dependencies = [ sources."ansi-styles-4.3.0" sources."chalk-3.0.0" @@ -108479,7 +108704,7 @@ in sources."ssb-client-4.9.0" sources."ssb-config-3.4.5" sources."ssb-db-19.2.0" - (sources."ssb-db2-2.1.2" // { + (sources."ssb-db2-2.1.3" // { dependencies = [ sources."abstract-leveldown-6.2.3" (sources."flumecodec-0.0.1" // { @@ -108501,7 +108726,7 @@ in ]; }) sources."ssb-ebt-5.6.7" - (sources."ssb-friends-4.4.5" // { + (sources."ssb-friends-4.4.7" // { dependencies = [ sources."flumecodec-0.0.1" sources."level-codec-6.2.0" @@ -108645,7 +108870,7 @@ in sources."word-wrap-1.2.3" sources."wrap-fn-0.1.5" sources."wrappy-1.0.2" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xtend-4.0.2" sources."zerr-1.0.4" ]; @@ -108745,7 +108970,7 @@ in sources."async-1.5.2" sources."async-limiter-1.0.1" sources."asynckit-0.4.0" - (sources."aws-sdk-2.918.0" // { + (sources."aws-sdk-2.932.0" // { dependencies = [ sources."uuid-3.3.2" ]; @@ -109101,8 +109326,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."minicap-prebuilt-2.3.0" sources."minimatch-3.0.4" @@ -109522,35 +109747,36 @@ in sha512 = "Mv+BQr5XTUrKqAXmpqm6Ddli6Ief+AiPZkRsIrAoUKFuq/ElkUh9ZMYxXD0iQNZ5ADghZKLOWz1h7hTClB7zgQ=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/compat-data-7.14.4" - sources."@babel/core-7.14.3" - sources."@babel/generator-7.14.3" - sources."@babel/helper-compilation-targets-7.14.4" - sources."@babel/helper-function-name-7.14.2" - sources."@babel/helper-get-function-arity-7.12.13" - sources."@babel/helper-member-expression-to-functions-7.13.12" - sources."@babel/helper-module-imports-7.13.12" - sources."@babel/helper-module-transforms-7.14.2" - sources."@babel/helper-optimise-call-expression-7.12.13" - sources."@babel/helper-replace-supers-7.14.4" - sources."@babel/helper-simple-access-7.13.12" - sources."@babel/helper-split-export-declaration-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/helper-validator-option-7.12.17" - sources."@babel/helpers-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/code-frame-7.14.5" + sources."@babel/compat-data-7.14.7" + sources."@babel/core-7.14.6" + sources."@babel/generator-7.14.5" + sources."@babel/helper-compilation-targets-7.14.5" + sources."@babel/helper-function-name-7.14.5" + sources."@babel/helper-get-function-arity-7.14.5" + sources."@babel/helper-hoist-variables-7.14.5" + sources."@babel/helper-member-expression-to-functions-7.14.7" + sources."@babel/helper-module-imports-7.14.5" + sources."@babel/helper-module-transforms-7.14.5" + sources."@babel/helper-optimise-call-expression-7.14.5" + sources."@babel/helper-replace-supers-7.14.5" + sources."@babel/helper-simple-access-7.14.5" + sources."@babel/helper-split-export-declaration-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/helper-validator-option-7.14.5" + sources."@babel/helpers-7.14.6" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" ]; }) - sources."@babel/parser-7.14.4" - sources."@babel/template-7.12.13" - sources."@babel/traverse-7.14.2" - sources."@babel/types-7.14.4" - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@babel/parser-7.14.7" + sources."@babel/template-7.14.5" + sources."@babel/traverse-7.14.7" + sources."@babel/types-7.14.5" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."@stylelint/postcss-css-in-js-0.37.2" sources."@stylelint/postcss-markdown-0.36.2" sources."@types/mdast-3.0.3" @@ -109558,7 +109784,7 @@ in sources."@types/normalize-package-data-2.4.0" sources."@types/parse-json-4.0.0" sources."@types/unist-2.0.3" - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."ansi-regex-5.0.0" sources."ansi-styles-3.2.1" sources."array-union-2.1.0" @@ -109577,7 +109803,7 @@ in sources."callsites-3.1.0" sources."camelcase-5.3.1" sources."camelcase-keys-6.2.2" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" (sources."chalk-4.1.1" // { dependencies = [ sources."ansi-styles-4.3.0" @@ -109595,7 +109821,7 @@ in sources."color-name-1.1.3" sources."colorette-1.2.2" sources."concat-map-0.0.1" - sources."convert-source-map-1.7.0" + sources."convert-source-map-1.8.0" sources."cosmiconfig-7.0.0" sources."cssesc-3.0.0" sources."debug-4.3.2" @@ -109615,7 +109841,7 @@ in sources."domelementtype-1.3.1" sources."domhandler-2.4.2" sources."domutils-1.7.0" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" sources."emoji-regex-8.0.0" sources."entities-1.1.2" sources."error-ex-1.3.2" @@ -109641,7 +109867,7 @@ in sources."global-modules-2.0.0" sources."global-prefix-3.0.0" sources."globals-11.12.0" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."globjoin-0.1.4" sources."gonzales-pe-4.3.0" sources."hard-rejection-2.1.0" @@ -109711,7 +109937,7 @@ in ]; }) sources."ms-2.1.2" - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" (sources."normalize-package-data-3.0.2" // { dependencies = [ sources."semver-7.3.5" @@ -109732,7 +109958,7 @@ in sources."path-parse-1.0.7" sources."path-type-4.0.0" sources."picomatch-2.3.0" - (sources."postcss-7.0.35" // { + (sources."postcss-7.0.36" // { dependencies = [ (sources."chalk-2.4.2" // { dependencies = [ @@ -109832,7 +110058,7 @@ in sources."write-file-atomic-3.0.3" sources."yallist-4.0.0" sources."yaml-1.10.2" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" sources."zwitch-1.0.5" ]; buildInputs = globalBuildInputs; @@ -109848,16 +110074,16 @@ in svelte-language-server = nodeEnv.buildNodePackage { name = "svelte-language-server"; packageName = "svelte-language-server"; - version = "0.14.0"; + version = "0.14.2"; src = fetchurl { - url = "https://registry.npmjs.org/svelte-language-server/-/svelte-language-server-0.14.0.tgz"; - sha512 = "P9QsonwMBUvwQxJbnNKggvJf1K24xaUhRrzoqkJabHtUT37JyYrt9anMIZ7WmjuKUEI/Ejf+Gu/8A0VvyUBaUQ=="; + url = "https://registry.npmjs.org/svelte-language-server/-/svelte-language-server-0.14.2.tgz"; + sha512 = "cBKcjcvFEDml6CGrJeRqVS+qvbZNZEOoww0bW4HnLy/wV4cSXTG9yHsGhOZpPrWcCQ0F2oqiDE87K/h9gpSFCQ=="; }; dependencies = [ sources."@emmetio/abbreviation-2.2.2" sources."@emmetio/css-abbreviation-2.1.4" sources."@emmetio/scanner-1.0.0" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/pug-2.0.4" sources."@types/sass-1.16.0" sources."anymatch-3.1.2" @@ -109865,7 +110091,7 @@ in sources."binary-extensions-2.2.0" sources."brace-expansion-1.1.11" sources."braces-3.0.2" - sources."chokidar-3.5.1" + sources."chokidar-3.5.2" sources."concat-map-0.0.1" sources."dedent-js-1.0.1" sources."detect-indent-6.1.0" @@ -109894,16 +110120,16 @@ in sources."path-is-absolute-1.0.1" sources."picomatch-2.3.0" sources."prettier-2.3.0" - sources."prettier-plugin-svelte-2.3.0" - sources."readdirp-3.5.0" + sources."prettier-plugin-svelte-2.3.1" + sources."readdirp-3.6.0" sources."source-map-0.7.3" sources."strip-indent-3.0.0" - sources."svelte-3.38.2" + sources."svelte-3.38.3" sources."svelte-preprocess-4.7.3" - sources."svelte2tsx-0.2.0" + sources."svelte2tsx-0.3.0" sources."to-regex-range-5.0.1" - sources."tslib-2.2.0" - sources."typescript-4.3.2" + sources."tslib-2.3.0" + sources."typescript-4.3.4" sources."vscode-css-languageservice-5.0.0" sources."vscode-emmet-helper-2.1.2" sources."vscode-html-languageservice-4.0.0" @@ -109953,7 +110179,7 @@ in sources."dom-serializer-1.3.2" sources."domelementtype-2.2.0" sources."domhandler-4.2.0" - sources."domutils-2.6.0" + sources."domutils-2.7.0" sources."entities-2.2.0" sources."has-flag-4.0.0" sources."mdn-data-2.0.14" @@ -110305,8 +110531,8 @@ in sources."methods-1.1.2" sources."micromatch-3.1.10" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mixin-deep-1.3.2" @@ -110551,7 +110777,7 @@ in sources."truncate-utf8-bytes-1.0.2" sources."type-is-1.6.18" sources."typedarray-0.0.6" - sources."uglify-js-3.13.8" + sources."uglify-js-3.13.9" sources."undefsafe-2.0.3" (sources."union-value-1.0.1" // { dependencies = [ @@ -110672,8 +110898,8 @@ in sources."locate-path-3.0.0" sources."long-4.0.0" sources."mime-2.5.2" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimist-1.2.5" sources."module-alias-2.2.2" sources."moment-2.29.1" @@ -110717,7 +110943,7 @@ in sources."verror-1.10.0" sources."which-module-2.0.0" sources."wrap-ansi-5.1.0" - sources."ws-6.2.1" + sources."ws-6.2.2" sources."y18n-4.0.3" sources."yargs-13.3.2" sources."yargs-parser-13.1.2" @@ -111169,9 +111395,9 @@ in sha512 = "z/Xo1WHxAn7eueUbRLXoMNew+R3dzGENPG/yiCt/KT2WgAfRuQ7GeF855kLcnCCqdTnl6W7sYq8TKy+/DLpiqQ=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/highlight-7.14.0" + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/highlight-7.14.5" sources."@sindresorhus/is-0.14.0" sources."@szmarczak/http-timer-1.1.2" sources."@textlint/ast-node-types-4.4.3" @@ -111181,7 +111407,7 @@ in sources."@types/normalize-package-data-2.4.0" sources."@types/parse5-5.0.3" sources."@types/unist-2.0.3" - sources."acorn-8.3.0" + sources."acorn-8.4.0" sources."acorn-jsx-5.3.1" sources."alex-9.1.0" (sources."ansi-align-3.0.0" // { @@ -111932,35 +112158,28 @@ in textlint-rule-write-good = nodeEnv.buildNodePackage { name = "textlint-rule-write-good"; packageName = "textlint-rule-write-good"; - version = "1.6.2"; + version = "2.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/textlint-rule-write-good/-/textlint-rule-write-good-1.6.2.tgz"; - sha1 = "3c79b04091319d4e8be5fb442c596bf500e8493e"; + url = "https://registry.npmjs.org/textlint-rule-write-good/-/textlint-rule-write-good-2.0.0.tgz"; + sha512 = "yvOJavJD+PgyUzvsoLDDzDtgCVBva/HNhEvsFnYVugrWz0qy2hr+/4B4wkzjro4wfPbwz20GQe5h13N4DeUEeA=="; }; dependencies = [ sources."@textlint/ast-node-types-4.4.3" sources."@textlint/types-1.5.5" - sources."adverb-where-0.0.9" + sources."adverb-where-0.2.5" sources."boundary-1.0.1" - sources."call-bind-1.0.2" - sources."define-properties-1.1.3" + sources."commander-2.20.3" sources."e-prime-0.10.4" - sources."function-bind-1.1.1" - sources."get-intrinsic-1.1.1" - sources."has-1.0.3" - sources."has-symbols-1.0.2" - sources."no-cliches-0.1.1" - sources."object-keys-1.1.1" - sources."object.assign-4.1.2" + sources."no-cliches-0.3.4" sources."passive-voice-0.1.0" sources."structured-source-3.0.2" sources."textlint-rule-helper-2.2.0" - sources."too-wordy-0.1.6" + sources."too-wordy-0.3.4" sources."unist-util-is-3.0.0" sources."unist-util-visit-1.4.1" sources."unist-util-visit-parents-2.1.2" sources."weasel-words-0.1.1" - sources."write-good-0.11.3" + sources."write-good-1.0.8" ]; buildInputs = globalBuildInputs; meta = { @@ -111988,7 +112207,7 @@ in sources."@types/debug-4.1.5" sources."@types/http-cache-semantics-4.0.0" sources."@types/keyv-3.1.1" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/responselike-1.0.0" sources."abbrev-1.1.1" sources."abstract-logging-2.0.1" @@ -112039,7 +112258,7 @@ in sources."busboy-0.3.1" sources."bytes-3.1.0" sources."cacheable-lookup-5.0.4" - sources."cacheable-request-7.0.1" + sources."cacheable-request-7.0.2" sources."callsite-1.0.0" sources."caseless-0.12.0" sources."chalk-4.1.0" @@ -112064,7 +112283,7 @@ in sources."content-type-1.0.4" sources."cookie-0.4.0" sources."cookie-signature-1.0.6" - sources."core-js-3.13.1" + sources."core-js-3.15.1" sources."core-util-is-1.0.2" sources."css-select-1.2.0" sources."css-what-2.1.3" @@ -112241,7 +112460,7 @@ in ]; }) sources."nopt-4.0.3" - sources."normalize-url-4.5.1" + sources."normalize-url-6.1.0" sources."npm-bundled-1.1.2" sources."npm-normalize-package-bin-1.0.1" sources."npm-packlist-1.4.8" @@ -112276,6 +112495,7 @@ in sources."json-buffer-3.0.0" sources."keyv-3.1.0" sources."lowercase-keys-1.0.1" + sources."normalize-url-4.5.1" sources."p-cancelable-1.1.0" sources."responselike-1.0.2" sources."semver-6.3.0" @@ -112403,7 +112623,7 @@ in sources."wide-align-1.1.3" sources."with-open-file-0.1.7" sources."wrappy-1.0.2" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xmlhttprequest-ssl-1.5.5" sources."yallist-3.1.1" sources."yarn-1.22.4" @@ -112523,8 +112743,8 @@ in sources."jsprim-1.4.1" sources."keypress-0.2.1" sources."lru-cache-6.0.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimatch-3.0.4" sources."minimist-1.2.5" sources."mkdirp-0.5.5" @@ -112851,10 +113071,10 @@ in typescript = nodeEnv.buildNodePackage { name = "typescript"; packageName = "typescript"; - version = "4.3.2"; + version = "4.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-4.3.2.tgz"; - sha512 = "zZ4hShnmnoVnAHpVHWpTcxdv7dWP60S2FsydQLV8V5PbS3FifjWFFRiHSWpDJahly88PRyV5teTSLoq4eG7mKw=="; + url = "https://registry.npmjs.org/typescript/-/typescript-4.3.4.tgz"; + sha512 = "uauPG7XZn9F/mo+7MrsRjyvbxFpzemRjKEZXS4AK83oP2KKOJPvb+9cO/gmnv8arWZvhnjVOXz7B49m1l0e9Ew=="; }; buildInputs = globalBuildInputs; meta = { @@ -112906,10 +113126,10 @@ in uglify-js = nodeEnv.buildNodePackage { name = "uglify-js"; packageName = "uglify-js"; - version = "3.13.8"; + version = "3.13.9"; src = fetchurl { - url = "https://registry.npmjs.org/uglify-js/-/uglify-js-3.13.8.tgz"; - sha512 = "PvFLMFIQHfIjFFlvAch69U2IvIxK9TNzNWt1SxZGp9JZ/v70yvqIQuiJeVPPtUMOzoNt+aNRDk4wgxb34wvEqA=="; + url = "https://registry.npmjs.org/uglify-js/-/uglify-js-3.13.9.tgz"; + sha512 = "wZbyTQ1w6Y7fHdt8sJnHfSIuWeDgk6B5rCb4E/AM6QNNPbOMIZph21PW5dRB3h7Df0GszN+t7RuUH6sWK5bF0g=="; }; buildInputs = globalBuildInputs; meta = { @@ -112955,7 +113175,7 @@ in sources."@types/component-emitter-1.2.10" sources."@types/cookie-0.4.0" sources."@types/cors-2.8.10" - sources."@types/node-14.17.1" + sources."@types/node-14.17.4" sources."abbrev-1.1.1" sources."accepts-1.3.7" sources."ansi-regex-5.0.0" @@ -113008,7 +113228,7 @@ in sources."depd-1.1.2" sources."destroy-1.0.4" sources."diff-5.0.0" - sources."diff2html-3.4.4" + sources."diff2html-3.4.5" sources."dnd-page-scroll-0.0.4" sources."duplexer3-0.1.4" sources."ee-first-1.1.1" @@ -113095,8 +113315,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" sources."minimist-1.2.5" @@ -113215,7 +113435,7 @@ in sources."y18n-5.0.8" sources."yallist-2.1.2" sources."yargs-17.0.1" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -113269,7 +113489,7 @@ in sources."d3-dsv-2.0.0" sources."d3-force-2.1.1" sources."d3-format-2.0.0" - sources."d3-geo-2.0.1" + sources."d3-geo-2.0.2" sources."d3-geo-projection-3.0.0" sources."d3-hierarchy-2.0.0" sources."d3-interpolate-2.0.1" @@ -113393,7 +113613,7 @@ in sources."strip-ansi-6.0.0" ]; }) - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -113440,7 +113660,7 @@ in sources."wrap-ansi-7.0.0" sources."y18n-5.0.8" sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -113473,25 +113693,21 @@ in vls = nodeEnv.buildNodePackage { name = "vls"; packageName = "vls"; - version = "0.7.2"; + version = "0.7.4"; src = fetchurl { - url = "https://registry.npmjs.org/vls/-/vls-0.7.2.tgz"; - sha512 = "9nKgSPtNxQlc32K5GgZV++MdsCpNuac/SfxnEmVI0DCF4E0Uekj+RUo7Zk6NnA4veiNMN+AEjAIlbXYWPHgX6Q=="; + url = "https://registry.npmjs.org/vls/-/vls-0.7.4.tgz"; + sha512 = "uU5HCIK5vX096eMA5fBwyR7tv36m1Ssy910w5ILT5OvCUTXgBR58gZRJWrL2HxCyG8oYXC+oFWjhJc7+ExBUgQ=="; }; dependencies = [ sources."@babel/code-frame-7.12.11" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."chalk-2.4.2" sources."escape-string-regexp-1.0.5" ]; }) - (sources."@eslint/eslintrc-0.4.1" // { - dependencies = [ - sources."globals-12.4.0" - ]; - }) + sources."@eslint/eslintrc-0.4.2" sources."acorn-7.4.1" sources."acorn-jsx-5.3.1" sources."ajv-6.12.6" @@ -113525,8 +113741,8 @@ in sources."emoji-regex-8.0.0" sources."enquirer-2.3.6" sources."escape-string-regexp-4.0.0" - sources."eslint-7.27.0" - sources."eslint-plugin-vue-7.10.0" + sources."eslint-7.29.0" + sources."eslint-plugin-vue-7.11.1" sources."eslint-scope-5.1.1" (sources."eslint-utils-2.1.0" // { dependencies = [ @@ -113563,11 +113779,7 @@ in sources."functional-red-black-tree-1.0.1" sources."glob-7.1.7" sources."glob-parent-5.1.2" - (sources."globals-13.9.0" // { - dependencies = [ - sources."type-fest-0.20.2" - ]; - }) + sources."globals-13.9.0" sources."has-1.0.3" sources."has-flag-3.0.0" sources."ignore-4.0.6" @@ -113602,10 +113814,10 @@ in sources."path-key-3.1.1" sources."path-parse-1.0.7" sources."prelude-ls-1.2.1" - sources."prettier-2.3.0" + sources."prettier-2.3.1" sources."progress-2.0.3" sources."punycode-2.1.1" - sources."regexpp-3.1.0" + sources."regexpp-3.2.0" sources."require-from-string-2.0.2" sources."resolve-1.20.0" sources."resolve-from-4.0.0" @@ -113627,7 +113839,7 @@ in sources."supports-color-5.5.0" (sources."table-6.7.1" // { dependencies = [ - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."json-schema-traverse-1.0.0" ]; }) @@ -113642,8 +113854,8 @@ in }) sources."tsutils-2.29.0" sources."type-check-0.4.0" - sources."type-fest-0.8.1" - sources."typescript-4.3.2" + sources."type-fest-0.20.2" + sources."typescript-4.3.4" sources."uri-js-4.4.1" sources."v8-compile-cache-2.3.0" (sources."vue-eslint-parser-7.6.0" // { @@ -113831,229 +114043,111 @@ in "vscode-lldb-build-deps-../../misc/vscode-extensions/vscode-lldb/build-deps" = nodeEnv.buildNodePackage { name = "vscode-lldb"; packageName = "vscode-lldb"; - version = "1.6.1"; + version = "1.6.5"; src = ../../misc/vscode-extensions/vscode-lldb/build-deps; dependencies = [ - sources."@types/json5-0.0.30" + sources."@discoveryjs/json-ext-0.5.3" + sources."@types/eslint-7.2.13" + sources."@types/eslint-scope-3.7.0" + sources."@types/estree-0.0.47" + sources."@types/json-schema-7.0.7" sources."@types/mocha-7.0.2" sources."@types/node-8.10.66" - sources."@types/vscode-1.56.0" + sources."@types/vscode-1.57.0" sources."@types/yauzl-2.9.1" - sources."@webassemblyjs/ast-1.9.0" - sources."@webassemblyjs/floating-point-hex-parser-1.9.0" - sources."@webassemblyjs/helper-api-error-1.9.0" - sources."@webassemblyjs/helper-buffer-1.9.0" - sources."@webassemblyjs/helper-code-frame-1.9.0" - sources."@webassemblyjs/helper-fsm-1.9.0" - sources."@webassemblyjs/helper-module-context-1.9.0" - sources."@webassemblyjs/helper-wasm-bytecode-1.9.0" - sources."@webassemblyjs/helper-wasm-section-1.9.0" - sources."@webassemblyjs/ieee754-1.9.0" - sources."@webassemblyjs/leb128-1.9.0" - sources."@webassemblyjs/utf8-1.9.0" - sources."@webassemblyjs/wasm-edit-1.9.0" - sources."@webassemblyjs/wasm-gen-1.9.0" - sources."@webassemblyjs/wasm-opt-1.9.0" - sources."@webassemblyjs/wasm-parser-1.9.0" - sources."@webassemblyjs/wast-parser-1.9.0" - sources."@webassemblyjs/wast-printer-1.9.0" + sources."@ungap/promise-all-settled-1.1.2" + sources."@webassemblyjs/ast-1.11.0" + sources."@webassemblyjs/floating-point-hex-parser-1.11.0" + sources."@webassemblyjs/helper-api-error-1.11.0" + sources."@webassemblyjs/helper-buffer-1.11.0" + sources."@webassemblyjs/helper-numbers-1.11.0" + sources."@webassemblyjs/helper-wasm-bytecode-1.11.0" + sources."@webassemblyjs/helper-wasm-section-1.11.0" + sources."@webassemblyjs/ieee754-1.11.0" + sources."@webassemblyjs/leb128-1.11.0" + sources."@webassemblyjs/utf8-1.11.0" + sources."@webassemblyjs/wasm-edit-1.11.0" + sources."@webassemblyjs/wasm-gen-1.11.0" + sources."@webassemblyjs/wasm-opt-1.11.0" + sources."@webassemblyjs/wasm-parser-1.11.0" + sources."@webassemblyjs/wast-printer-1.11.0" + sources."@webpack-cli/configtest-1.0.4" + sources."@webpack-cli/info-1.3.0" + sources."@webpack-cli/serve-1.5.1" sources."@xtuc/ieee754-1.2.0" sources."@xtuc/long-4.2.2" - sources."acorn-6.4.2" + sources."acorn-8.4.0" sources."ajv-6.12.6" - sources."ajv-errors-1.0.1" sources."ajv-keywords-3.5.2" - sources."ansi-colors-3.2.3" + sources."ansi-colors-4.1.1" sources."ansi-regex-3.0.0" - sources."ansi-styles-3.2.1" + sources."ansi-styles-4.3.0" sources."anymatch-3.1.2" - sources."aproba-1.2.0" - sources."argparse-1.0.10" - sources."arr-diff-4.0.0" - sources."arr-flatten-1.1.0" - sources."arr-union-3.1.0" - sources."array-unique-0.3.2" - (sources."asn1.js-5.4.1" // { - dependencies = [ - sources."bn.js-4.12.0" - ]; - }) - (sources."assert-1.5.0" // { - dependencies = [ - sources."inherits-2.0.1" - sources."util-0.10.3" - ]; - }) - sources."assign-symbols-1.0.0" - sources."async-each-1.0.3" - sources."atob-2.1.2" + sources."argparse-2.0.1" sources."azure-devops-node-api-10.2.2" sources."balanced-match-1.0.2" - (sources."base-0.11.2" // { - dependencies = [ - sources."define-property-1.0.0" - ]; - }) - sources."base64-js-1.5.1" sources."big.js-5.2.2" sources."binary-extensions-2.2.0" - sources."bindings-1.5.0" - sources."bluebird-3.7.2" - sources."bn.js-5.2.0" sources."boolbase-1.0.0" sources."brace-expansion-1.1.11" sources."braces-3.0.2" - sources."brorand-1.1.0" sources."browser-stdout-1.3.1" - sources."browserify-aes-1.2.0" - sources."browserify-cipher-1.0.1" - sources."browserify-des-1.0.2" - sources."browserify-rsa-4.1.0" - (sources."browserify-sign-4.2.1" // { - dependencies = [ - sources."readable-stream-3.6.0" - sources."safe-buffer-5.2.1" - sources."string_decoder-1.3.0" - ]; - }) - sources."browserify-zlib-0.2.0" - (sources."buffer-4.9.2" // { - dependencies = [ - sources."isarray-1.0.0" - ]; - }) + sources."browserslist-4.16.6" sources."buffer-crc32-0.2.13" sources."buffer-from-1.1.1" - sources."buffer-xor-1.0.3" - sources."builtin-status-codes-3.0.0" - (sources."cacache-12.0.4" // { - dependencies = [ - sources."glob-7.1.7" - ]; - }) - sources."cache-base-1.0.1" sources."call-bind-1.0.2" - sources."camelcase-5.3.1" - (sources."chalk-2.4.2" // { + sources."camelcase-6.2.0" + sources."caniuse-lite-1.0.30001239" + (sources."chalk-4.1.1" // { dependencies = [ - sources."supports-color-5.5.0" + sources."supports-color-7.2.0" ]; }) - sources."cheerio-1.0.0-rc.9" - sources."cheerio-select-1.4.0" - sources."chokidar-3.3.0" - sources."chownr-1.1.4" + sources."cheerio-1.0.0-rc.10" + sources."cheerio-select-1.5.0" + sources."chokidar-3.5.1" sources."chrome-trace-event-1.0.3" - sources."cipher-base-1.0.4" - (sources."class-utils-0.3.6" // { + (sources."cliui-7.0.4" // { dependencies = [ - sources."define-property-0.2.5" - (sources."is-accessor-descriptor-0.1.6" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) - sources."is-buffer-1.1.6" - (sources."is-data-descriptor-0.1.4" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) - sources."is-descriptor-0.1.6" - sources."kind-of-5.1.0" + sources."ansi-regex-5.0.0" + sources."is-fullwidth-code-point-3.0.0" + sources."string-width-4.2.2" + sources."strip-ansi-6.0.0" ]; }) - (sources."cliui-5.0.0" // { - dependencies = [ - sources."ansi-regex-4.1.0" - sources."string-width-3.1.0" - sources."strip-ansi-5.2.0" - ]; - }) - sources."collection-visit-1.0.0" - sources."color-convert-1.9.3" - sources."color-name-1.1.3" + sources."clone-deep-4.0.1" + sources."color-convert-2.0.1" + sources."color-name-1.1.4" + sources."colorette-1.2.2" sources."commander-6.2.1" - sources."commondir-1.0.1" - sources."component-emitter-1.3.0" sources."concat-map-0.0.1" - (sources."concat-stream-1.6.2" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.7" - sources."string_decoder-1.1.1" - ]; - }) - sources."console-browserify-1.2.0" - sources."constants-browserify-1.0.0" - sources."copy-concurrently-1.0.5" - sources."copy-descriptor-0.1.1" sources."core-util-is-1.0.2" - (sources."create-ecdh-4.0.4" // { - dependencies = [ - sources."bn.js-4.12.0" - ]; - }) - sources."create-hash-1.2.0" - sources."create-hmac-1.1.7" - sources."cross-spawn-6.0.5" - sources."crypto-browserify-3.12.0" - sources."css-select-4.1.2" + sources."cross-spawn-7.0.3" + sources."css-select-4.1.3" sources."css-what-5.0.1" - sources."cyclist-1.0.1" - sources."debug-3.2.6" - sources."decamelize-1.2.0" - sources."decode-uri-component-0.2.0" - sources."define-properties-1.1.3" - sources."define-property-2.0.2" - sources."denodeify-1.2.1" - sources."des.js-1.0.1" - sources."detect-file-1.0.0" - sources."diff-3.5.0" - (sources."diffie-hellman-5.0.3" // { + (sources."debug-4.3.1" // { dependencies = [ - sources."bn.js-4.12.0" + sources."ms-2.1.2" ]; }) + sources."decamelize-4.0.0" + sources."denodeify-1.2.1" + sources."diff-5.0.0" sources."dom-serializer-1.3.2" - sources."domain-browser-1.2.0" sources."domelementtype-2.2.0" sources."domhandler-4.2.0" - sources."domutils-2.6.0" - (sources."duplexify-3.7.1" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.7" - sources."string_decoder-1.1.1" - ]; - }) - (sources."elliptic-6.5.4" // { - dependencies = [ - sources."bn.js-4.12.0" - ]; - }) - sources."emoji-regex-7.0.3" + sources."domutils-2.7.0" + sources."electron-to-chromium-1.3.755" + sources."emoji-regex-8.0.0" sources."emojis-list-3.0.0" - sources."end-of-stream-1.4.4" - (sources."enhanced-resolve-4.5.0" // { - dependencies = [ - sources."isarray-1.0.0" - sources."memory-fs-0.5.0" - sources."readable-stream-2.3.7" - sources."string_decoder-1.1.1" - ]; - }) + sources."enhanced-resolve-5.8.2" sources."entities-2.2.0" + sources."envinfo-7.8.1" sources."errno-0.1.8" - (sources."es-abstract-1.18.3" // { - dependencies = [ - sources."object.assign-4.1.2" - ]; - }) - sources."es-to-primitive-1.2.1" - sources."escape-string-regexp-1.0.5" - sources."eslint-scope-4.0.3" - sources."esprima-4.0.1" + sources."es-module-lexer-0.6.0" + sources."escalade-3.1.1" + sources."escape-string-regexp-4.0.0" + sources."eslint-scope-5.1.1" (sources."esrecurse-4.3.0" // { dependencies = [ sources."estraverse-5.2.0" @@ -114061,575 +114155,231 @@ in }) sources."estraverse-4.3.0" sources."events-3.3.0" - sources."evp_bytestokey-1.0.3" - (sources."expand-brackets-2.1.4" // { - dependencies = [ - sources."debug-2.6.9" - sources."define-property-0.2.5" - sources."extend-shallow-2.0.1" - (sources."is-accessor-descriptor-0.1.6" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) - sources."is-buffer-1.1.6" - (sources."is-data-descriptor-0.1.4" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) - sources."is-descriptor-0.1.6" - sources."kind-of-5.1.0" - sources."ms-2.0.0" - ]; - }) - sources."expand-tilde-2.0.2" - (sources."extend-shallow-3.0.2" // { - dependencies = [ - sources."is-extendable-1.0.1" - ]; - }) - (sources."extglob-2.0.4" // { - dependencies = [ - sources."define-property-1.0.0" - sources."extend-shallow-2.0.1" - ]; - }) + sources."execa-5.1.1" sources."fast-deep-equal-3.1.3" sources."fast-json-stable-stringify-2.1.0" + sources."fastest-levenshtein-1.0.12" sources."fd-slicer-1.1.0" - sources."figgy-pudding-3.5.2" - sources."file-uri-to-path-1.0.0" sources."fill-range-7.0.1" - sources."find-cache-dir-2.1.0" - sources."find-up-3.0.0" - sources."findup-sync-3.0.0" - sources."flat-4.1.1" - (sources."flush-write-stream-1.1.1" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.7" - sources."string_decoder-1.1.1" - ]; - }) - sources."for-in-1.0.2" - sources."fragment-cache-0.2.1" - (sources."from2-2.3.0" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.7" - sources."string_decoder-1.1.1" - ]; - }) - sources."fs-write-stream-atomic-1.0.10" + sources."find-up-5.0.0" + sources."flat-5.0.2" sources."fs.realpath-1.0.0" - sources."fsevents-2.1.3" + sources."fsevents-2.3.2" sources."function-bind-1.1.1" sources."get-caller-file-2.0.5" sources."get-intrinsic-1.1.1" - sources."get-value-2.0.6" - sources."glob-7.1.3" + sources."get-stream-6.0.1" + sources."glob-7.1.6" sources."glob-parent-5.1.2" - (sources."global-modules-2.0.0" // { - dependencies = [ - sources."global-prefix-3.0.0" - ]; - }) - sources."global-prefix-1.0.2" + sources."glob-to-regexp-0.4.1" sources."graceful-fs-4.2.6" sources."growl-1.10.5" sources."has-1.0.3" - sources."has-bigints-1.0.1" - sources."has-flag-3.0.0" + sources."has-flag-4.0.0" sources."has-symbols-1.0.2" - sources."has-value-1.0.0" - (sources."has-values-1.0.0" // { - dependencies = [ - sources."is-buffer-1.1.6" - (sources."is-number-3.0.0" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) - sources."kind-of-4.0.0" - ]; - }) - (sources."hash-base-3.1.0" // { - dependencies = [ - sources."readable-stream-3.6.0" - sources."safe-buffer-5.2.1" - sources."string_decoder-1.3.0" - ]; - }) - sources."hash.js-1.1.7" sources."he-1.2.0" - sources."hmac-drbg-1.0.1" - sources."homedir-polyfill-1.0.3" sources."htmlparser2-6.1.0" - sources."https-browserify-1.0.0" - sources."ieee754-1.2.1" - sources."iferr-0.1.5" - sources."import-local-2.0.0" - sources."imurmurhash-0.1.4" - sources."infer-owner-1.0.4" + sources."human-signals-2.1.0" + sources."import-local-3.0.2" sources."inflight-1.0.6" sources."inherits-2.0.4" - sources."ini-1.3.8" - sources."interpret-1.4.0" - sources."is-accessor-descriptor-1.0.0" - sources."is-bigint-1.0.2" + sources."interpret-2.2.0" sources."is-binary-path-2.1.0" - sources."is-boolean-object-1.1.1" - sources."is-buffer-2.0.5" - sources."is-callable-1.2.3" - sources."is-data-descriptor-1.0.0" - sources."is-date-object-1.0.4" - sources."is-descriptor-1.0.2" - sources."is-extendable-0.1.1" + sources."is-core-module-2.4.0" sources."is-extglob-2.1.1" sources."is-fullwidth-code-point-2.0.0" sources."is-glob-4.0.1" - sources."is-negative-zero-2.0.1" sources."is-number-7.0.0" - sources."is-number-object-1.0.5" + sources."is-plain-obj-2.1.0" sources."is-plain-object-2.0.4" - sources."is-regex-1.1.3" - sources."is-string-1.0.6" - sources."is-symbol-1.0.4" - sources."is-windows-1.0.2" - sources."is-wsl-1.1.0" + sources."is-stream-2.0.0" sources."isarray-0.0.1" sources."isexe-2.0.0" sources."isobject-3.0.1" - sources."js-yaml-3.13.1" + sources."jest-worker-27.0.2" + sources."js-yaml-4.0.0" sources."json-parse-better-errors-1.0.2" sources."json-schema-traverse-0.4.1" - sources."json5-1.0.1" + sources."json5-2.2.0" sources."kind-of-6.0.3" sources."leven-3.1.0" sources."linkify-it-2.2.0" - sources."loader-runner-2.4.0" - sources."loader-utils-1.4.0" - sources."locate-path-3.0.0" + sources."loader-runner-4.2.0" + sources."loader-utils-2.0.0" + sources."locate-path-6.0.0" sources."lodash-4.17.21" - sources."log-symbols-3.0.0" - sources."lru-cache-5.1.1" - sources."make-dir-2.1.0" - sources."map-cache-0.2.2" - sources."map-visit-1.0.0" + sources."log-symbols-4.0.0" + sources."lru-cache-6.0.0" (sources."markdown-it-10.0.0" // { dependencies = [ + sources."argparse-1.0.10" sources."entities-2.0.3" ]; }) - sources."md5.js-1.3.5" sources."mdurl-1.0.1" - (sources."memory-fs-0.4.1" // { + (sources."memory-fs-0.5.0" // { dependencies = [ sources."isarray-1.0.0" sources."readable-stream-2.3.7" + sources."safe-buffer-5.1.2" sources."string_decoder-1.1.1" ]; }) sources."memory-streams-0.1.3" - (sources."micromatch-3.1.10" // { - dependencies = [ - (sources."braces-2.3.2" // { - dependencies = [ - sources."extend-shallow-2.0.1" - ]; - }) - (sources."fill-range-4.0.0" // { - dependencies = [ - sources."extend-shallow-2.0.1" - ]; - }) - sources."is-buffer-1.1.6" - (sources."is-number-3.0.0" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) - sources."to-regex-range-2.1.1" - ]; - }) - (sources."miller-rabin-4.0.1" // { - dependencies = [ - sources."bn.js-4.12.0" - ]; - }) + sources."merge-stream-2.0.0" + sources."micromatch-4.0.4" sources."mime-1.6.0" - sources."minimalistic-assert-1.0.1" - sources."minimalistic-crypto-utils-1.0.1" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" + sources."mimic-fn-2.1.0" sources."minimatch-3.0.4" sources."minimist-1.2.5" - sources."mississippi-3.0.0" - (sources."mixin-deep-1.3.2" // { - dependencies = [ - sources."is-extendable-1.0.1" - ]; - }) - sources."mkdirp-0.5.5" - sources."mocha-7.2.0" - sources."move-concurrently-1.0.1" - sources."ms-2.1.1" + sources."mocha-8.4.0" + sources."ms-2.1.3" sources."mute-stream-0.0.8" - sources."nan-2.14.2" - sources."nanomatch-1.2.13" + sources."nanoid-3.1.20" sources."neo-async-2.6.2" - sources."nice-try-1.0.5" - sources."node-environment-flags-1.0.6" - (sources."node-libs-browser-2.2.1" // { - dependencies = [ - sources."isarray-1.0.0" - sources."punycode-1.4.1" - (sources."readable-stream-2.3.7" // { - dependencies = [ - sources."string_decoder-1.1.1" - ]; - }) - sources."safe-buffer-5.2.1" - sources."string_decoder-1.3.0" - ]; - }) + sources."node-releases-1.1.73" sources."normalize-path-3.0.0" + sources."npm-run-path-4.0.1" sources."nth-check-2.0.0" - sources."object-assign-4.1.1" - (sources."object-copy-0.1.0" // { - dependencies = [ - sources."define-property-0.2.5" - sources."is-accessor-descriptor-0.1.6" - sources."is-buffer-1.1.6" - sources."is-data-descriptor-0.1.4" - (sources."is-descriptor-0.1.6" // { - dependencies = [ - sources."kind-of-5.1.0" - ]; - }) - sources."kind-of-3.2.2" - ]; - }) sources."object-inspect-1.10.3" - sources."object-keys-1.1.1" - sources."object-visit-1.0.1" - sources."object.assign-4.1.0" - sources."object.getownpropertydescriptors-2.1.2" - sources."object.pick-1.3.0" sources."once-1.4.0" - sources."os-browserify-0.3.0" + sources."onetime-5.1.2" sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" sources."osenv-0.1.5" - sources."p-limit-2.3.0" - sources."p-locate-3.0.0" + sources."p-limit-3.1.0" + sources."p-locate-5.0.0" sources."p-try-2.2.0" - sources."pako-1.0.11" - (sources."parallel-transform-1.2.0" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.7" - sources."string_decoder-1.1.1" - ]; - }) - sources."parse-asn1-5.1.6" - sources."parse-passwd-1.0.0" sources."parse-semver-1.1.1" sources."parse5-6.0.1" sources."parse5-htmlparser2-tree-adapter-6.0.1" - sources."pascalcase-0.1.1" - sources."path-browserify-0.0.1" - sources."path-dirname-1.0.2" - sources."path-exists-3.0.0" + sources."path-exists-4.0.0" sources."path-is-absolute-1.0.1" - sources."path-key-2.0.1" - sources."pbkdf2-3.1.2" + sources."path-key-3.1.1" + sources."path-parse-1.0.7" sources."pend-1.2.0" sources."picomatch-2.3.0" - sources."pify-4.0.1" - sources."pkg-dir-3.0.0" - sources."posix-character-classes-0.1.1" - sources."process-0.11.10" + (sources."pkg-dir-4.2.0" // { + dependencies = [ + sources."find-up-4.1.0" + sources."locate-path-5.0.0" + sources."p-limit-2.3.0" + sources."p-locate-4.1.0" + ]; + }) sources."process-nextick-args-2.0.1" - sources."promise-inflight-1.0.1" sources."prr-1.0.1" - (sources."public-encrypt-4.0.3" // { - dependencies = [ - sources."bn.js-4.12.0" - ]; - }) - sources."pump-3.0.0" - (sources."pumpify-1.5.1" // { - dependencies = [ - sources."pump-2.0.1" - ]; - }) sources."punycode-2.1.1" sources."qs-6.10.1" - sources."querystring-0.2.0" - sources."querystring-es3-0.2.1" sources."randombytes-2.1.0" - sources."randomfill-1.0.4" sources."read-1.0.7" sources."readable-stream-1.0.34" - sources."readdirp-3.2.0" - sources."regex-not-1.0.2" - sources."remove-trailing-separator-1.1.0" - sources."repeat-element-1.1.4" - sources."repeat-string-1.6.1" + sources."readdirp-3.5.0" + sources."rechoir-0.7.0" sources."require-directory-2.1.1" - sources."require-main-filename-2.0.0" - sources."resolve-cwd-2.0.0" - (sources."resolve-dir-1.0.1" // { - dependencies = [ - sources."global-modules-1.0.0" - ]; - }) - sources."resolve-from-3.0.0" - sources."resolve-url-0.2.1" - sources."ret-0.1.15" - sources."rimraf-2.7.1" - sources."ripemd160-2.0.2" - sources."run-queue-1.0.3" - sources."safe-buffer-5.1.2" - sources."safe-regex-1.1.0" - sources."safer-buffer-2.1.2" - sources."schema-utils-1.0.0" + sources."resolve-1.20.0" + sources."resolve-cwd-3.0.0" + sources."resolve-from-5.0.0" + sources."safe-buffer-5.2.1" + sources."schema-utils-3.0.0" sources."semver-5.7.1" - sources."serialize-javascript-4.0.0" - sources."set-blocking-2.0.0" - (sources."set-value-2.0.1" // { - dependencies = [ - sources."extend-shallow-2.0.1" - ]; - }) - sources."setimmediate-1.0.5" - sources."sha.js-2.4.11" - sources."shebang-command-1.2.0" - sources."shebang-regex-1.0.0" + sources."serialize-javascript-5.0.1" + sources."shallow-clone-3.0.1" + sources."shebang-command-2.0.0" + sources."shebang-regex-3.0.0" sources."side-channel-1.0.4" - (sources."snapdragon-0.8.2" // { - dependencies = [ - sources."debug-2.6.9" - sources."define-property-0.2.5" - sources."extend-shallow-2.0.1" - (sources."is-accessor-descriptor-0.1.6" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) - sources."is-buffer-1.1.6" - (sources."is-data-descriptor-0.1.4" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) - sources."is-descriptor-0.1.6" - sources."kind-of-5.1.0" - sources."ms-2.0.0" - sources."source-map-0.5.7" - ]; - }) - (sources."snapdragon-node-2.1.1" // { - dependencies = [ - sources."define-property-1.0.0" - ]; - }) - (sources."snapdragon-util-3.0.1" // { - dependencies = [ - sources."is-buffer-1.1.6" - sources."kind-of-3.2.2" - ]; - }) + sources."signal-exit-3.0.3" sources."source-list-map-2.0.1" sources."source-map-0.6.1" - sources."source-map-resolve-0.5.3" sources."source-map-support-0.5.19" - sources."source-map-url-0.4.1" - sources."split-string-3.1.0" sources."sprintf-js-1.0.3" - sources."ssri-6.0.2" - (sources."static-extend-0.1.2" // { - dependencies = [ - sources."define-property-0.2.5" - (sources."is-accessor-descriptor-0.1.6" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) - sources."is-buffer-1.1.6" - (sources."is-data-descriptor-0.1.4" // { - dependencies = [ - sources."kind-of-3.2.2" - ]; - }) - sources."is-descriptor-0.1.6" - sources."kind-of-5.1.0" - ]; - }) - (sources."stream-browserify-2.0.2" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.7" - sources."string_decoder-1.1.1" - ]; - }) - sources."stream-each-1.2.3" - (sources."stream-http-2.8.3" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.7" - sources."string_decoder-1.1.1" - ]; - }) - sources."stream-shift-1.0.1" sources."string-argv-0.3.1" sources."string-width-2.1.1" - sources."string.prototype.trimend-1.0.4" - sources."string.prototype.trimstart-1.0.4" sources."string_decoder-0.10.31" sources."strip-ansi-4.0.0" - sources."strip-json-comments-2.0.1" - sources."supports-color-6.0.0" - sources."tapable-1.1.3" - (sources."terser-4.8.0" // { + sources."strip-final-newline-2.0.0" + sources."strip-json-comments-3.1.1" + sources."supports-color-8.1.1" + sources."tapable-2.2.0" + (sources."terser-5.7.0" // { dependencies = [ sources."commander-2.20.3" + sources."source-map-0.7.3" ]; }) - sources."terser-webpack-plugin-1.4.5" - (sources."through2-2.0.5" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.7" - sources."string_decoder-1.1.1" - ]; - }) - sources."timers-browserify-2.0.12" + sources."terser-webpack-plugin-5.1.3" sources."tmp-0.0.29" - sources."to-arraybuffer-1.0.1" - (sources."to-object-path-0.3.0" // { - dependencies = [ - sources."is-buffer-1.1.6" - sources."kind-of-3.2.2" - ]; - }) - sources."to-regex-3.0.2" sources."to-regex-range-5.0.1" - (sources."ts-loader-6.2.2" // { + (sources."ts-loader-8.3.0" // { dependencies = [ - sources."micromatch-4.0.4" - sources."semver-6.3.0" + sources."enhanced-resolve-4.5.0" + sources."semver-7.3.5" + sources."tapable-1.1.3" ]; }) - sources."tslib-2.2.0" - sources."tty-browserify-0.0.0" + sources."tslib-2.3.0" sources."tunnel-0.0.6" sources."typed-rest-client-1.8.4" - sources."typedarray-0.0.6" - sources."typescript-3.9.9" + sources."typescript-4.3.4" sources."uc.micro-1.0.6" - sources."unbox-primitive-1.0.1" sources."underscore-1.13.1" - sources."union-value-1.0.1" - sources."unique-filename-1.1.1" - sources."unique-slug-2.0.2" - (sources."unset-value-1.0.0" // { - dependencies = [ - (sources."has-value-0.3.1" // { - dependencies = [ - sources."isobject-2.1.0" - ]; - }) - sources."has-values-0.1.4" - sources."isarray-1.0.0" - ]; - }) - sources."upath-1.2.0" sources."uri-js-4.4.1" - sources."urix-0.1.0" - (sources."url-0.11.0" // { - dependencies = [ - sources."punycode-1.3.2" - ]; - }) sources."url-join-1.1.0" - sources."use-3.1.1" - (sources."util-0.11.1" // { - dependencies = [ - sources."inherits-2.0.3" - ]; - }) sources."util-deprecate-1.0.2" sources."v8-compile-cache-2.3.0" - sources."vm-browserify-1.1.2" - sources."vsce-1.91.0" + (sources."vsce-1.88.0" // { + dependencies = [ + sources."ansi-styles-3.2.1" + sources."chalk-2.4.2" + sources."color-convert-1.9.3" + sources."color-name-1.1.3" + sources."escape-string-regexp-1.0.5" + sources."has-flag-3.0.0" + sources."supports-color-5.5.0" + ]; + }) sources."vscode-debugadapter-testsupport-1.47.0" sources."vscode-debugprotocol-1.47.0" - (sources."watchpack-1.7.5" // { + sources."watchpack-2.2.0" + sources."webpack-5.40.0" + (sources."webpack-cli-4.7.2" // { dependencies = [ - sources."chokidar-3.5.1" - sources."fsevents-2.3.2" - sources."readdirp-3.5.0" + sources."commander-7.2.0" ]; }) - (sources."watchpack-chokidar2-2.0.1" // { - dependencies = [ - sources."anymatch-2.0.0" - sources."binary-extensions-1.13.1" - sources."braces-2.3.2" - sources."chokidar-2.1.8" - sources."extend-shallow-2.0.1" - sources."fill-range-4.0.0" - sources."fsevents-1.2.13" - sources."glob-parent-3.1.0" - sources."is-binary-path-1.0.1" - sources."is-buffer-1.1.6" - sources."is-glob-3.1.0" - sources."is-number-3.0.0" - sources."isarray-1.0.0" - sources."kind-of-3.2.2" - sources."normalize-path-2.1.1" - sources."readable-stream-2.3.7" - sources."readdirp-2.2.1" - sources."string_decoder-1.1.1" - sources."to-regex-range-2.1.1" - ]; - }) - sources."webpack-4.46.0" - (sources."webpack-cli-3.3.12" // { - dependencies = [ - sources."supports-color-6.1.0" - ]; - }) - sources."webpack-sources-1.4.3" - sources."which-1.3.1" - sources."which-boxed-primitive-1.0.2" - sources."which-module-2.0.0" + sources."webpack-merge-5.8.0" + sources."webpack-sources-2.3.0" + sources."which-2.0.2" sources."wide-align-1.1.3" - sources."worker-farm-1.7.0" - (sources."wrap-ansi-5.1.0" // { + sources."wildcard-2.0.0" + sources."workerpool-6.1.0" + (sources."wrap-ansi-7.0.0" // { dependencies = [ - sources."ansi-regex-4.1.0" - sources."string-width-3.1.0" - sources."strip-ansi-5.2.0" + sources."ansi-regex-5.0.0" + sources."is-fullwidth-code-point-3.0.0" + sources."string-width-4.2.2" + sources."strip-ansi-6.0.0" ]; }) sources."wrappy-1.0.2" - sources."xtend-4.0.2" - sources."y18n-4.0.3" - sources."yallist-3.1.1" + sources."y18n-5.0.8" + sources."yallist-4.0.0" sources."yaml-1.10.2" - (sources."yargs-13.3.2" // { + (sources."yargs-16.2.0" // { dependencies = [ - sources."ansi-regex-4.1.0" - sources."string-width-3.1.0" - sources."strip-ansi-5.2.0" + sources."ansi-regex-5.0.0" + sources."is-fullwidth-code-point-3.0.0" + sources."string-width-4.2.2" + sources."strip-ansi-6.0.0" ]; }) - sources."yargs-parser-13.1.2" - sources."yargs-unparser-1.6.0" + sources."yargs-parser-20.2.4" + sources."yargs-unparser-2.0.0" sources."yauzl-2.10.0" sources."yazl-2.5.1" + sources."yocto-queue-0.1.0" ]; buildInputs = globalBuildInputs; meta = { @@ -114696,7 +114446,7 @@ in sources."combined-stream-1.0.8" sources."commander-2.20.3" sources."concat-map-0.0.1" - sources."config-chain-1.1.12" + sources."config-chain-1.1.13" sources."consolidate-0.14.5" sources."core-util-is-1.0.2" sources."create-error-class-3.0.2" @@ -114805,8 +114555,8 @@ in sources."supports-color-2.0.0" ]; }) - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-1.2.5" @@ -114891,7 +114641,7 @@ in sources."tslib-1.14.1" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" - sources."uglify-js-3.13.8" + sources."uglify-js-3.13.9" sources."uid-0.0.2" sources."unbzip2-stream-1.4.3" sources."unyield-0.0.1" @@ -114932,9 +114682,9 @@ in sha512 = "/dd2bJLxOmX8Ie0EPTlmU+F8cxAekn/1m8K9OAFoijm4fc8SdHznFUUEKuz2RMMhsaL5+rccj8xLFAJELYNbaA=="; }; dependencies = [ - sources."@babel/code-frame-7.12.13" - sources."@babel/helper-validator-identifier-7.14.0" - sources."@babel/highlight-7.14.0" + sources."@babel/code-frame-7.14.5" + sources."@babel/helper-validator-identifier-7.14.5" + sources."@babel/highlight-7.14.5" sources."@emmetio/extract-abbreviation-0.1.6" sources."@mrmlnc/readdir-enhanced-2.2.1" sources."@nodelib/fs.stat-1.1.3" @@ -114950,7 +114700,7 @@ in sources."@starptech/rehype-webparser-0.10.0" sources."@starptech/webparser-0.10.0" sources."@szmarczak/http-timer-1.1.2" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/unist-2.0.3" sources."@types/vfile-3.0.2" sources."@types/vfile-message-2.0.0" @@ -115095,7 +114845,7 @@ in sources."component-emitter-1.3.0" sources."concat-map-0.0.1" sources."concat-stream-1.6.2" - sources."config-chain-1.1.12" + sources."config-chain-1.1.13" sources."configstore-4.0.0" sources."copy-descriptor-0.1.1" sources."core-js-2.6.12" @@ -115333,11 +115083,7 @@ in sources."isarray-1.0.0" sources."isexe-2.0.0" sources."isobject-3.0.1" - (sources."js-beautify-1.13.13" // { - dependencies = [ - sources."mkdirp-1.0.4" - ]; - }) + sources."js-beautify-1.14.0" sources."js-tokens-4.0.0" sources."js-yaml-3.14.1" sources."json-buffer-3.0.0" @@ -115724,7 +115470,7 @@ in sources."type-check-0.3.2" sources."type-fest-0.3.1" sources."typedarray-0.0.6" - sources."typescript-3.9.9" + sources."typescript-3.9.10" (sources."typescript-eslint-parser-16.0.1" // { dependencies = [ sources."semver-5.5.0" @@ -115873,13 +115619,13 @@ in sha512 = "uhSNGU27KDT2e2v51l/NqMc59O7X0DG7CHonZOwsnvMHLvyudCLZgXCU8Rw4T8gpqg2asn50vfPHq7l3DGlN5w=="; }; dependencies = [ - sources."@babel/runtime-corejs3-7.14.0" + sources."@babel/runtime-corejs3-7.14.7" sources."@mapbox/node-pre-gyp-1.0.5" sources."@tootallnate/once-1.1.2" sources."@types/raf-3.4.0" sources."abab-2.0.5" sources."abbrev-1.1.1" - sources."acorn-8.3.0" + sources."acorn-8.4.0" (sources."acorn-globals-6.0.0" // { dependencies = [ sources."acorn-7.4.1" @@ -115895,27 +115641,23 @@ in sources."at-least-node-1.0.0" sources."atob-2.1.2" sources."balanced-match-1.0.2" - (sources."bit-field-1.3.6" // { + (sources."bit-field-1.5.1" // { dependencies = [ sources."ansi-regex-5.0.0" - sources."fs-extra-8.1.0" + sources."fs-extra-10.0.0" sources."is-fullwidth-code-point-3.0.0" - sources."jsonfile-4.0.0" - sources."onml-1.3.0" sources."string-width-4.2.2" sources."strip-ansi-6.0.0" - sources."universalify-0.1.2" - sources."yargs-15.4.1" + sources."yargs-17.0.1" ]; }) sources."brace-expansion-1.1.11" sources."browser-process-hrtime-1.0.0" sources."btoa-1.2.1" - sources."camelcase-5.3.1" sources."canvas-2.8.0" sources."canvg-3.0.7" sources."chownr-2.0.0" - (sources."cliui-6.0.0" // { + (sources."cliui-7.0.4" // { dependencies = [ sources."ansi-regex-5.0.0" sources."is-fullwidth-code-point-3.0.0" @@ -115929,7 +115671,7 @@ in sources."combined-stream-1.0.8" sources."concat-map-0.0.1" sources."console-control-strings-1.1.0" - sources."core-js-pure-3.13.1" + sources."core-js-pure-3.15.1" sources."core-util-is-1.0.2" sources."cssom-0.4.4" (sources."cssstyle-2.3.0" // { @@ -115939,8 +115681,7 @@ in }) sources."data-urls-2.0.0" sources."debug-4.3.2" - sources."decamelize-1.2.0" - sources."decimal.js-10.2.1" + sources."decimal.js-10.3.0" sources."decompress-response-4.2.1" sources."deep-is-0.1.3" sources."delayed-stream-1.0.0" @@ -115958,7 +115699,6 @@ in sources."estraverse-5.2.0" sources."esutils-2.0.3" sources."fast-levenshtein-2.0.6" - sources."find-up-4.1.0" sources."form-data-3.0.1" sources."fs-extra-9.1.0" sources."fs-minipass-2.1.0" @@ -115981,7 +115721,6 @@ in sources."json5-2.2.0" sources."jsonfile-6.1.0" sources."levn-0.3.0" - sources."locate-path-5.0.0" sources."lodash-4.17.21" sources."logidrom-0.3.1" sources."lru-cache-6.0.0" @@ -115990,8 +115729,8 @@ in sources."semver-6.3.0" ]; }) - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-response-2.1.0" sources."minimatch-3.0.4" sources."minimist-1.2.5" @@ -116009,11 +115748,7 @@ in sources."once-1.4.0" sources."onml-2.1.0" sources."optionator-0.8.3" - sources."p-limit-2.3.0" - sources."p-locate-4.1.0" - sources."p-try-2.2.0" sources."parse5-6.0.1" - sources."path-exists-4.0.0" sources."path-is-absolute-1.0.1" sources."performance-now-2.1.0" sources."prelude-ls-1.1.2" @@ -116024,7 +115759,6 @@ in sources."readable-stream-2.3.7" sources."regenerator-runtime-0.13.8" sources."require-directory-2.1.1" - sources."require-main-filename-2.0.0" sources."rgbcolor-1.0.1" sources."rimraf-3.0.2" sources."safe-buffer-5.1.2" @@ -116042,7 +115776,7 @@ in sources."string_decoder-1.1.1" sources."strip-ansi-3.0.1" sources."svg-pathdata-5.0.5" - sources."svg2img-0.9.2" + sources."svg2img-0.9.3" sources."symbol-tree-3.2.4" sources."tar-6.1.0" (sources."tough-cookie-4.0.0" // { @@ -116057,15 +115791,14 @@ in sources."util-deprecate-1.0.2" sources."w3c-hr-time-1.0.2" sources."w3c-xmlserializer-2.0.0" - sources."wavedrom-2.6.9" + sources."wavedrom-2.8.1" sources."webidl-conversions-6.1.0" sources."whatwg-encoding-1.0.5" sources."whatwg-mimetype-2.3.0" - sources."whatwg-url-8.5.0" - sources."which-module-2.0.0" + sources."whatwg-url-8.6.0" sources."wide-align-1.1.3" sources."word-wrap-1.2.3" - (sources."wrap-ansi-6.2.0" // { + (sources."wrap-ansi-7.0.0" // { dependencies = [ sources."ansi-regex-5.0.0" sources."is-fullwidth-code-point-3.0.0" @@ -116074,24 +115807,20 @@ in ]; }) sources."wrappy-1.0.2" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xml-name-validator-3.0.0" sources."xmlchars-2.2.0" - sources."y18n-4.0.3" + sources."y18n-5.0.8" sources."yallist-4.0.0" (sources."yargs-16.2.0" // { dependencies = [ sources."ansi-regex-5.0.0" - sources."cliui-7.0.4" sources."is-fullwidth-code-point-3.0.0" sources."string-width-4.2.2" sources."strip-ansi-6.0.0" - sources."wrap-ansi-7.0.0" - sources."y18n-5.0.8" - sources."yargs-parser-20.2.7" ]; }) - sources."yargs-parser-18.1.3" + sources."yargs-parser-20.2.9" ]; buildInputs = globalBuildInputs; meta = { @@ -116106,20 +115835,21 @@ in web-ext = nodeEnv.buildNodePackage { name = "web-ext"; packageName = "web-ext"; - version = "6.1.0"; + version = "6.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/web-ext/-/web-ext-6.1.0.tgz"; - sha512 = "f9sBuysFoCJAuS03wRtSBH8dPKQUZvCVT+AoqBW3tBBN6a92P0PyGF2lTwZJ5wrOOvXu7w2DvuAFOU6CnBugFw=="; + url = "https://registry.npmjs.org/web-ext/-/web-ext-6.2.0.tgz"; + sha512 = "vibPf31/5NajygV85b6PSki2gZwOK0lQYfC2q30VdEHeS1d4hJU39mnDXM0D2nM6t7REYR8xRNgmTiDcsHCS8A=="; }; dependencies = [ sources."@babel/code-frame-7.12.11" - sources."@babel/helper-validator-identifier-7.14.0" - (sources."@babel/highlight-7.14.0" // { + sources."@babel/helper-validator-identifier-7.14.5" + (sources."@babel/highlight-7.14.5" // { dependencies = [ sources."ansi-styles-3.2.1" sources."chalk-2.4.2" sources."color-convert-1.9.3" sources."color-name-1.1.3" + sources."escape-string-regexp-1.0.5" sources."has-flag-3.0.0" sources."supports-color-5.5.0" ]; @@ -116128,23 +115858,26 @@ in sources."@devicefarmer/adbkit-2.11.3" sources."@devicefarmer/adbkit-logcat-1.1.0" sources."@devicefarmer/adbkit-monkey-1.0.1" - (sources."@eslint/eslintrc-0.4.1" // { + (sources."@eslint/eslintrc-0.4.2" // { dependencies = [ sources."debug-4.3.2" - sources."globals-12.4.0" sources."ms-2.1.2" ]; }) - sources."@mdn/browser-compat-data-3.2.4" + sources."@mdn/browser-compat-data-3.3.7" sources."@sindresorhus/is-0.14.0" sources."@szmarczak/http-timer-1.1.2" sources."@types/minimatch-3.0.4" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/yauzl-2.9.1" sources."acorn-7.4.1" sources."acorn-jsx-5.3.1" - sources."addons-linter-3.2.0" - sources."addons-scanner-utils-4.4.0" + (sources."addons-linter-3.8.0" // { + dependencies = [ + sources."yargs-17.0.1" + ]; + }) + sources."addons-scanner-utils-4.8.0" sources."adm-zip-0.5.5" sources."ajv-6.12.6" sources."ajv-merge-patch-4.1.0" @@ -116181,11 +115914,7 @@ in sources."bcrypt-pbkdf-1.0.2" sources."bluebird-2.9.34" sources."boolbase-1.0.0" - (sources."boxen-5.0.1" // { - dependencies = [ - sources."type-fest-0.20.2" - ]; - }) + sources."boxen-5.0.1" sources."brace-expansion-1.1.11" sources."buffer-crc32-0.2.13" sources."buffer-equal-constant-time-1.0.1" @@ -116200,14 +115929,10 @@ in sources."callsites-3.1.0" sources."camelcase-6.2.0" sources."caseless-0.12.0" - sources."chalk-4.1.0" - sources."cheerio-1.0.0-rc.6" - sources."cheerio-select-1.4.0" - (sources."chrome-launcher-0.13.4" // { - dependencies = [ - sources."mkdirp-0.5.5" - ]; - }) + sources."chalk-4.1.1" + sources."cheerio-1.0.0-rc.10" + sources."cheerio-select-1.5.0" + sources."chrome-launcher-0.14.0" sources."ci-info-2.0.0" sources."cli-boxes-2.2.1" (sources."cliui-7.0.4" // { @@ -116228,11 +115953,11 @@ in sources."concat-map-0.0.1" sources."concat-stream-1.6.2" sources."configstore-5.0.1" - sources."core-js-3.8.3" + sources."core-js-3.12.0" sources."core-util-is-1.0.2" sources."cross-spawn-7.0.3" sources."crypto-random-string-2.0.0" - sources."css-select-4.1.2" + sources."css-select-4.1.3" sources."css-what-5.0.1" sources."dashdash-1.14.1" sources."debounce-1.2.0" @@ -116257,7 +115982,7 @@ in sources."dom-serializer-1.3.2" sources."domelementtype-2.2.0" sources."domhandler-4.2.0" - sources."domutils-2.6.0" + sources."domutils-2.7.0" sources."dot-prop-5.3.0" sources."dtrace-provider-0.8.8" sources."duplexer3-0.1.4" @@ -116272,8 +115997,8 @@ in sources."es6-promisify-6.1.1" sources."escalade-3.1.1" sources."escape-goat-2.1.1" - sources."escape-string-regexp-1.0.5" - (sources."eslint-7.24.0" // { + sources."escape-string-regexp-4.0.0" + (sources."eslint-7.28.0" // { dependencies = [ sources."ansi-regex-5.0.0" sources."debug-4.3.2" @@ -116281,14 +116006,14 @@ in sources."strip-ansi-6.0.0" ]; }) - sources."eslint-plugin-no-unsanitized-3.1.4" + sources."eslint-plugin-no-unsanitized-3.1.5" sources."eslint-scope-5.1.1" (sources."eslint-utils-2.1.0" // { dependencies = [ sources."eslint-visitor-keys-1.3.0" ]; }) - sources."eslint-visitor-keys-2.0.0" + sources."eslint-visitor-keys-2.1.0" (sources."espree-7.3.1" // { dependencies = [ sources."eslint-visitor-keys-1.3.0" @@ -116354,15 +116079,11 @@ in sources."get-intrinsic-1.1.1" sources."get-stream-5.2.0" sources."getpass-0.1.7" - sources."glob-7.1.6" + sources."glob-7.1.7" sources."glob-parent-5.1.2" sources."glob-to-regexp-0.4.1" sources."global-dirs-3.0.0" - (sources."globals-13.9.0" // { - dependencies = [ - sources."type-fest-0.20.2" - ]; - }) + sources."globals-13.9.0" (sources."got-9.6.0" // { dependencies = [ sources."get-stream-4.1.0" @@ -116382,7 +116103,7 @@ in sources."http-signature-1.2.0" sources."human-signals-1.1.1" sources."ignore-4.0.6" - sources."image-size-0.9.7" + sources."image-size-1.0.0" sources."immediate-3.0.6" sources."import-fresh-3.3.0" sources."import-lazy-2.1.0" @@ -116449,7 +116170,6 @@ in sources."lie-3.3.0" sources."lighthouse-logger-1.2.0" sources."lines-and-columns-1.1.6" - sources."lodash-4.17.21" sources."lodash.clonedeep-4.5.0" sources."lodash.includes-4.3.0" sources."lodash.isboolean-3.0.3" @@ -116457,6 +116177,7 @@ in sources."lodash.isnumber-3.0.3" sources."lodash.isplainobject-4.0.6" sources."lodash.isstring-4.0.1" + sources."lodash.merge-4.6.2" sources."lodash.once-4.1.1" sources."lodash.truncate-4.4.2" sources."lowercase-keys-1.0.1" @@ -116470,8 +116191,8 @@ in sources."marky-1.2.2" sources."mem-5.1.1" sources."merge-stream-2.0.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -116529,9 +116250,9 @@ in sources."path-key-3.1.1" sources."pend-1.2.0" sources."performance-now-2.1.0" - sources."pino-6.11.2" + sources."pino-6.11.3" sources."pino-std-serializers-3.2.0" - sources."postcss-8.2.10" + sources."postcss-8.3.4" sources."prelude-ls-1.2.1" sources."prepend-http-2.0.0" sources."process-nextick-args-2.0.1" @@ -116542,7 +116263,7 @@ in sources."pupa-2.1.1" sources."qs-6.5.2" sources."queue-6.0.2" - sources."quick-format-unescaped-4.0.1" + sources."quick-format-unescaped-4.0.3" (sources."rc-1.2.8" // { dependencies = [ sources."ini-1.3.8" @@ -116556,7 +116277,7 @@ in }) sources."regenerator-runtime-0.13.8" sources."regexp.prototype.flags-1.3.1" - sources."regexpp-3.1.0" + sources."regexpp-3.2.0" sources."registry-auth-token-4.2.1" sources."registry-url-5.1.0" (sources."relaxed-json-1.0.3" // { @@ -116565,6 +116286,7 @@ in sources."chalk-2.4.2" sources."color-convert-1.9.3" sources."color-name-1.1.3" + sources."escape-string-regexp-1.0.5" sources."has-flag-3.0.0" sources."supports-color-5.5.0" ]; @@ -116591,11 +116313,12 @@ in sources."shebang-regex-3.0.0" sources."shell-quote-1.6.1" sources."shellwords-0.1.1" - sources."sign-addon-3.3.0" + sources."sign-addon-3.5.0" sources."signal-exit-3.0.3" sources."slice-ansi-4.0.0" sources."sonic-boom-1.4.1" sources."source-map-0.6.1" + sources."source-map-js-0.6.2" sources."source-map-support-0.5.19" sources."spawn-sync-1.0.15" sources."split-0.3.3" @@ -116623,7 +116346,7 @@ in sources."supports-color-7.2.0" (sources."table-6.7.1" // { dependencies = [ - sources."ajv-8.5.0" + sources."ajv-8.6.0" sources."ansi-regex-5.0.0" sources."json-schema-traverse-1.0.0" sources."strip-ansi-6.0.0" @@ -116637,11 +116360,12 @@ in sources."to-readable-stream-1.0.0" sources."tosource-1.0.0" sources."tough-cookie-2.5.0" + sources."tslib-2.3.0" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."type-check-0.4.0" sources."type-detect-4.0.8" - sources."type-fest-0.8.1" + sources."type-fest-0.20.2" sources."typedarray-0.0.6" sources."typedarray-to-buffer-3.1.5" sources."unique-string-2.0.0" @@ -116669,14 +116393,14 @@ in }) sources."wrappy-1.0.2" sources."write-file-atomic-3.0.3" - sources."ws-7.4.3" + sources."ws-7.4.6" sources."xdg-basedir-4.0.0" sources."xml2js-0.4.23" sources."xmlbuilder-11.0.1" sources."y18n-5.0.8" sources."yallist-4.0.0" sources."yargs-16.2.0" - sources."yargs-parser-20.2.7" + sources."yargs-parser-20.2.9" sources."yauzl-2.10.0" (sources."zip-dir-2.0.0" // { dependencies = [ @@ -116697,17 +116421,17 @@ in webpack = nodeEnv.buildNodePackage { name = "webpack"; packageName = "webpack"; - version = "5.38.1"; + version = "5.40.0"; src = fetchurl { - url = "https://registry.npmjs.org/webpack/-/webpack-5.38.1.tgz"; - sha512 = "OqRmYD1OJbHZph6RUMD93GcCZy4Z4wC0ele4FXyYF0J6AxO1vOSuIlU1hkS/lDlR9CDYBz64MZRmdbdnFFoT2g=="; + url = "https://registry.npmjs.org/webpack/-/webpack-5.40.0.tgz"; + sha512 = "c7f5e/WWrxXWUzQqTBg54vBs5RgcAgpvKE4F4VegVgfo4x660ZxYUF2/hpMkZUnLjgytVTitjeXaN4IPlXCGIw=="; }; dependencies = [ - sources."@types/eslint-7.2.12" + sources."@types/eslint-7.2.13" sources."@types/eslint-scope-3.7.0" sources."@types/estree-0.0.47" sources."@types/json-schema-7.0.7" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@webassemblyjs/ast-1.11.0" sources."@webassemblyjs/floating-point-hex-parser-1.11.0" sources."@webassemblyjs/helper-api-error-1.11.0" @@ -116725,18 +116449,18 @@ in sources."@webassemblyjs/wast-printer-1.11.0" sources."@xtuc/ieee754-1.2.0" sources."@xtuc/long-4.2.2" - sources."acorn-8.3.0" + sources."acorn-8.4.0" sources."ajv-6.12.6" sources."ajv-keywords-3.5.2" sources."browserslist-4.16.6" sources."buffer-from-1.1.1" - sources."caniuse-lite-1.0.30001232" + sources."caniuse-lite-1.0.30001239" sources."chrome-trace-event-1.0.3" sources."colorette-1.2.2" sources."commander-2.20.3" - sources."electron-to-chromium-1.3.743" + sources."electron-to-chromium-1.3.755" sources."enhanced-resolve-5.8.2" - sources."es-module-lexer-0.4.1" + sources."es-module-lexer-0.6.0" sources."escalade-3.1.1" sources."eslint-scope-5.1.1" (sources."esrecurse-4.3.0" // { @@ -116756,10 +116480,10 @@ in sources."json-schema-traverse-0.4.1" sources."loader-runner-4.2.0" sources."merge-stream-2.0.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."neo-async-2.6.2" - sources."node-releases-1.1.72" + sources."node-releases-1.1.73" sources."p-limit-3.1.0" sources."punycode-2.1.1" sources."randombytes-2.1.0" @@ -116795,22 +116519,22 @@ in webpack-cli = nodeEnv.buildNodePackage { name = "webpack-cli"; packageName = "webpack-cli"; - version = "4.7.0"; + version = "4.7.2"; src = fetchurl { - url = "https://registry.npmjs.org/webpack-cli/-/webpack-cli-4.7.0.tgz"; - sha512 = "7bKr9182/sGfjFm+xdZSwgQuFjgEcy0iCTIBxRUeteJ2Kr8/Wz0qNJX+jw60LU36jApt4nmMkep6+W5AKhok6g=="; + url = "https://registry.npmjs.org/webpack-cli/-/webpack-cli-4.7.2.tgz"; + sha512 = "mEoLmnmOIZQNiRl0ebnjzQ74Hk0iKS5SiEEnpq3dRezoyR3yPaeQZCMCe+db4524pj1Pd5ghZXjT41KLzIhSLw=="; }; dependencies = [ sources."@discoveryjs/json-ext-0.5.3" - sources."@webpack-cli/configtest-1.0.3" - sources."@webpack-cli/info-1.2.4" - sources."@webpack-cli/serve-1.4.0" + sources."@webpack-cli/configtest-1.0.4" + sources."@webpack-cli/info-1.3.0" + sources."@webpack-cli/serve-1.5.1" sources."clone-deep-4.0.1" sources."colorette-1.2.2" sources."commander-7.2.0" sources."cross-spawn-7.0.3" sources."envinfo-7.8.1" - sources."execa-5.0.1" + sources."execa-5.1.1" sources."fastest-levenshtein-1.0.12" sources."find-up-4.1.0" sources."function-bind-1.1.1" @@ -116847,7 +116571,7 @@ in sources."signal-exit-3.0.3" sources."strip-final-newline-2.0.0" sources."v8-compile-cache-2.3.0" - sources."webpack-merge-5.7.3" + sources."webpack-merge-5.8.0" sources."which-2.0.2" sources."wildcard-2.0.0" ]; @@ -116872,7 +116596,7 @@ in dependencies = [ sources."@types/glob-7.1.3" sources."@types/minimatch-3.0.4" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."accepts-1.3.7" sources."ajv-6.12.6" sources."ajv-errors-1.0.1" @@ -117153,8 +116877,8 @@ in sources."methods-1.1.2" sources."micromatch-3.1.10" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."minimalistic-assert-1.0.1" sources."minimatch-3.0.4" sources."minimist-1.2.5" @@ -117427,7 +117151,7 @@ in ]; }) sources."wrappy-1.0.2" - sources."ws-6.2.1" + sources."ws-6.2.2" sources."y18n-4.0.3" sources."yargs-13.3.2" sources."yargs-parser-13.1.2" @@ -117451,9 +117175,9 @@ in sha512 = "k8UB2jLIb1Jip2nZbCz83T/XfhfjX6mB1yLJNYKrpYi7FQimfOoFv/0//iT6HV1K8FwUB5yUbCcnpLebJXJTug=="; }; dependencies = [ - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."@types/json-schema-7.0.7" sources."ajv-6.12.6" sources."ajv-keywords-3.5.2" @@ -117470,7 +117194,7 @@ in sources."fastq-1.11.0" sources."fill-range-7.0.1" sources."glob-parent-6.0.0" - sources."globby-11.0.3" + sources."globby-11.0.4" sources."ignore-5.1.8" sources."is-extglob-2.1.1" sources."is-glob-4.0.1" @@ -117508,10 +117232,10 @@ in webtorrent-cli = nodeEnv.buildNodePackage { name = "webtorrent-cli"; packageName = "webtorrent-cli"; - version = "3.2.4"; + version = "3.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/webtorrent-cli/-/webtorrent-cli-3.2.4.tgz"; - sha512 = "fobRASGOskIqf/ciwZ3TF14RhqWga6dR8kUD6a2E0L2YAY5n1PIJv1dVPXEwvfKHBFWDo5VwIH2OAzt/Tw2poQ=="; + url = "https://registry.npmjs.org/webtorrent-cli/-/webtorrent-cli-3.3.0.tgz"; + sha512 = "E0gb1fXb8xNScgewQmvAmNLrnEto6MOaKlfzITVzR+bbU80LeV/YdrLw536ffcwiUv0arKQyfR/WIweBFrKWbg=="; }; dependencies = [ sources."@protobufjs/aspromise-1.1.2" @@ -117525,7 +117249,7 @@ in sources."@protobufjs/pool-1.1.0" sources."@protobufjs/utf8-1.1.0" sources."@types/long-4.0.1" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."addr-to-ip-port-1.5.1" sources."airplay-js-0.3.0" sources."balanced-match-1.0.2" @@ -117547,13 +117271,13 @@ in ]; }) sources."bittorrent-peerid-1.3.3" - (sources."bittorrent-protocol-3.3.1" // { + (sources."bittorrent-protocol-3.4.1" // { dependencies = [ sources."debug-4.3.2" sources."ms-2.1.2" ]; }) - (sources."bittorrent-tracker-9.17.0" // { + (sources."bittorrent-tracker-9.17.2" // { dependencies = [ sources."debug-4.3.2" sources."decompress-response-6.0.0" @@ -117573,6 +117297,7 @@ in sources."buffer-fill-1.0.0" sources."buffer-from-1.1.1" sources."buffer-indexof-1.1.1" + sources."buffer-xor-2.0.2" sources."bufferutil-4.0.3" (sources."castv2-0.1.10" // { dependencies = [ @@ -117585,7 +117310,7 @@ in sources."chrome-dgram-3.0.6" sources."chrome-dns-1.0.1" sources."chrome-net-3.3.4" - (sources."chromecasts-1.9.1" // { + (sources."chromecasts-1.10.0" // { dependencies = [ sources."mime-1.6.0" ]; @@ -117613,7 +117338,7 @@ in sources."mime-1.6.0" ]; }) - sources."dns-packet-1.3.4" + sources."dns-packet-5.2.4" sources."dns-txt-2.0.2" sources."ecstatic-4.1.4" sources."ee-first-1.1.1" @@ -117642,7 +117367,7 @@ in sources."inherits-2.0.4" sources."ip-1.1.5" sources."ip-set-2.1.0" - sources."ipaddr.js-2.0.0" + sources."ipaddr.js-2.0.1" sources."is-ascii-1.0.0" sources."is-docker-2.2.1" sources."is-file-1.0.0" @@ -117683,7 +117408,7 @@ in sources."mp4-box-encoding-1.4.1" sources."mp4-stream-3.1.3" sources."ms-2.0.0" - (sources."multicast-dns-6.2.3" // { + (sources."multicast-dns-7.2.3" // { dependencies = [ sources."thunky-1.1.0" ]; @@ -117698,7 +117423,7 @@ in sources."nodebmc-0.0.7" sources."on-finished-2.3.0" sources."once-1.4.0" - sources."open-8.2.0" + sources."open-8.2.1" sources."package-json-versionify-1.0.4" (sources."parse-torrent-9.1.3" // { dependencies = [ @@ -117727,6 +117452,7 @@ in sources."randombytes-2.1.0" sources."range-parser-1.2.1" sources."range-slice-stream-2.0.0" + sources."rc4-0.1.5" sources."readable-stream-3.6.0" sources."record-cache-1.1.1" (sources."render-media-4.1.0" // { @@ -117739,7 +117465,7 @@ in sources."run-parallel-1.2.0" sources."run-parallel-limit-1.1.0" sources."run-series-1.1.9" - sources."rusha-0.8.13" + sources."rusha-0.8.14" sources."safe-buffer-5.2.1" sources."sax-1.1.4" sources."semver-5.1.1" @@ -117795,13 +117521,13 @@ in sources."ms-2.1.2" ]; }) - sources."ut_pex-3.0.0" + sources."ut_pex-3.0.1" sources."utf-8-validate-5.0.5" sources."util-deprecate-1.0.2" - sources."utp-native-2.5.0" + sources."utp-native-2.5.1" sources."videostream-3.2.2" sources."vlc-command-1.2.0" - (sources."webtorrent-1.0.0" // { + (sources."webtorrent-1.0.1" // { dependencies = [ sources."debug-4.3.2" sources."decompress-response-6.0.0" @@ -117812,7 +117538,7 @@ in }) sources."winreg-1.2.4" sources."wrappy-1.0.2" - sources."ws-7.4.6" + sources."ws-7.5.0" sources."xml2js-0.4.23" sources."xmlbuilder-11.0.1" sources."xmldom-0.1.31" @@ -117875,10 +117601,10 @@ in yaml-language-server = nodeEnv.buildNodePackage { name = "yaml-language-server"; packageName = "yaml-language-server"; - version = "0.19.2"; + version = "0.20.0"; src = fetchurl { - url = "https://registry.npmjs.org/yaml-language-server/-/yaml-language-server-0.19.2.tgz"; - sha512 = "E4yMj1oK+OCObD15LvEaHOw8y3ux7G4KrREQDsDkjqFhUm/3qCCPMh3NPXTRQyse3r6Xpsv+lAW17Qo/NKm+0g=="; + url = "https://registry.npmjs.org/yaml-language-server/-/yaml-language-server-0.20.0.tgz"; + sha512 = "JV5jqB/1p2g4WCW1Gi6Kd3RQQSepdvTQBIDLSSoVzi7Q7kH+6tFkFJlMCBs0qmxLPkaU062d3IxdTWDK/MvvEA=="; }; dependencies = [ sources."agent-base-4.3.0" @@ -117948,16 +117674,16 @@ in sha512 = "dbHkO8dp4/KDsU5V7akSWVdWB+yyfadR0q3vGxRKXxg1umiYlFUrPuiu66Iy4IpRRr2Qrqx495kInkZJIJtqmA=="; }; dependencies = [ - sources."@babel/runtime-7.14.0" - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" - (sources."@npmcli/arborist-2.6.1" // { + sources."@babel/runtime-7.14.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" + (sources."@npmcli/arborist-2.6.3" // { dependencies = [ sources."semver-7.3.5" ]; }) - (sources."@npmcli/git-2.0.9" // { + (sources."@npmcli/git-2.1.0" // { dependencies = [ sources."mkdirp-1.0.4" sources."semver-7.3.5" @@ -117984,7 +117710,7 @@ in sources."@tootallnate/once-1.1.2" sources."@types/expect-1.20.4" sources."@types/minimatch-3.0.4" - sources."@types/node-15.6.1" + sources."@types/node-15.12.4" sources."@types/vinyl-2.0.4" sources."abbrev-1.1.1" (sources."agent-base-6.0.2" // { @@ -118047,7 +117773,7 @@ in sources."readable-stream-3.6.0" ]; }) - sources."boolean-3.1.0" + sources."boolean-3.1.2" (sources."boxen-1.3.0" // { dependencies = [ sources."camelcase-4.1.0" @@ -118102,10 +117828,10 @@ in sources."concat-map-0.0.1" sources."concat-stream-1.6.2" sources."conf-1.4.0" - sources."config-chain-1.1.12" + sources."config-chain-1.1.13" sources."configstore-3.1.5" sources."console-control-strings-1.1.0" - sources."core-js-3.13.1" + sources."core-js-3.15.1" sources."core-util-is-1.0.2" sources."create-error-class-3.0.2" sources."cross-spawn-6.0.5" @@ -118196,7 +117922,7 @@ in sources."global-dirs-0.1.1" sources."global-tunnel-ng-2.7.1" sources."globalthis-1.0.2" - sources."globby-11.0.3" + sources."globby-11.0.4" (sources."got-8.3.2" // { dependencies = [ sources."get-stream-3.0.0" @@ -118338,9 +118064,9 @@ in sources."loud-rejection-1.6.0" sources."lowercase-keys-1.0.1" sources."lru-cache-6.0.0" - sources."macos-release-2.4.1" + sources."macos-release-2.5.0" sources."make-dir-1.3.0" - (sources."make-fetch-happen-8.0.14" // { + (sources."make-fetch-happen-9.0.3" // { dependencies = [ sources."http-cache-semantics-4.1.0" ]; @@ -118365,8 +118091,8 @@ in sources."merge-stream-2.0.0" sources."merge2-1.4.1" sources."micromatch-4.0.4" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-fn-2.1.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -118388,6 +118114,7 @@ in sources."ms-2.0.0" sources."multimatch-5.0.0" sources."mute-stream-0.0.7" + sources."negotiator-0.6.2" sources."nice-try-1.0.5" (sources."node-gyp-7.1.2" // { dependencies = [ @@ -118424,7 +118151,7 @@ in ]; }) sources."npm-normalize-package-bin-1.0.1" - (sources."npm-package-arg-8.1.2" // { + (sources."npm-package-arg-8.1.5" // { dependencies = [ sources."hosted-git-info-4.0.2" sources."semver-7.3.5" @@ -118436,7 +118163,7 @@ in sources."semver-7.3.5" ]; }) - sources."npm-registry-fetch-10.1.2" + sources."npm-registry-fetch-11.0.0" sources."npm-run-path-2.0.2" sources."npmlog-2.0.4" sources."number-is-nan-1.0.1" @@ -118450,7 +118177,7 @@ in ]; }) sources."open-6.4.0" - (sources."ora-5.4.0" // { + (sources."ora-5.4.1" // { dependencies = [ sources."ansi-regex-5.0.0" sources."ansi-styles-4.3.0" @@ -118487,7 +118214,7 @@ in sources."p-timeout-2.0.1" sources."p-try-1.0.0" sources."package-json-5.0.0" - (sources."pacote-11.3.3" // { + (sources."pacote-11.3.4" // { dependencies = [ sources."mkdirp-1.0.4" ]; @@ -118530,6 +118257,7 @@ in }) sources."prepend-http-2.0.0" sources."pretty-bytes-5.6.0" + sources."proc-log-1.0.0" sources."process-nextick-args-2.0.1" sources."promise-all-reject-late-1.0.1" sources."promise-call-limit-1.0.1" @@ -118620,7 +118348,7 @@ in sources."slash-3.0.0" sources."smart-buffer-4.1.0" sources."socks-2.6.1" - (sources."socks-proxy-agent-5.0.0" // { + (sources."socks-proxy-agent-5.0.1" // { dependencies = [ sources."debug-4.3.2" sources."ms-2.1.2" @@ -118800,7 +118528,7 @@ in sources."cross-spawn-7.0.3" sources."debug-4.3.2" sources."escape-string-regexp-4.0.0" - sources."execa-5.0.1" + sources."execa-5.1.1" (sources."figures-3.2.0" // { dependencies = [ sources."escape-string-regexp-1.0.5" @@ -118816,7 +118544,7 @@ in }) sources."get-stream-6.0.1" sources."has-flag-4.0.0" - sources."inquirer-8.1.0" + sources."inquirer-8.1.1" sources."is-fullwidth-code-point-3.0.0" sources."is-stream-2.0.0" sources."locate-path-6.0.0" @@ -118869,4 +118597,42 @@ in bypassCache = true; reconstructLock = true; }; + zx = nodeEnv.buildNodePackage { + name = "zx"; + packageName = "zx"; + version = "1.14.2"; + src = fetchurl { + url = "https://registry.npmjs.org/zx/-/zx-1.14.2.tgz"; + sha512 = "omgqRVve+5dqbFrogFSjJXLUCUr4xHF2Gan+Njn/z4fumhIj3tMTFEA9iV+HgiobZ5Mgl5N96z4S4fwhaas4Pw=="; + }; + dependencies = [ + sources."@types/node-15.12.4" + sources."@types/node-fetch-2.5.10" + sources."ansi-styles-4.3.0" + sources."asynckit-0.4.0" + sources."chalk-4.1.1" + sources."color-convert-2.0.1" + sources."color-name-1.1.4" + sources."combined-stream-1.0.8" + sources."delayed-stream-1.0.0" + sources."form-data-3.0.1" + sources."has-flag-4.0.0" + sources."isexe-2.0.0" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" + sources."node-fetch-2.6.1" + sources."shq-1.0.2" + sources."supports-color-7.2.0" + sources."which-2.0.2" + ]; + buildInputs = globalBuildInputs; + meta = { + description = "A tool for writing better scripts"; + homepage = "https://github.com/google/zx#readme"; + license = "Apache-2.0"; + }; + production = true; + bypassCache = true; + reconstructLock = true; + }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/arp/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/arp/default.nix index 518f1c9f42..d900f2b772 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/arp/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/arp/default.nix @@ -8,50 +8,48 @@ buildDunePackage rec { pname = "arp"; - version = "2.3.1"; - - minimumOCamlVersion = "4.06"; - - useDune2 = true; + version = "2.3.2"; src = fetchurl { url = "https://github.com/mirage/${pname}/releases/download/v${version}/${pname}-v${version}.tbz"; - sha256 = "1nzm3fbkvz702g8f60fs49736lpffwchy64i1l1raxm9b4lmdk3p"; + sha256 = "1s09ibj9v6pp2ckn96wxmn3mjifcj97asls5xc4zg75pflk0grgz"; }; + minimumOCamlVersion = "4.06"; + useDune2 = true; + nativeBuildInputs = [ bisect_ppx ]; propagatedBuildInputs = [ cstruct - ipaddr - macaddr - logs - mirage-time - mirage-protocols - lwt duration + ipaddr + logs + lwt + macaddr mirage-profile + mirage-protocols + mirage-time ]; doCheck = true; checkInputs = [ alcotest + ethernet + mirage-clock-unix mirage-profile mirage-random mirage-random-test - mirage-vnetif - mirage-clock-unix - mirage-random mirage-time-unix - ethernet + mirage-vnetif ]; meta = with lib; { description = "Address Resolution Protocol purely in OCaml"; - license = licenses.isc; homepage = "https://github.com/mirage/arp"; - maintainers = [ maintainers.sternenseemann ]; + license = licenses.isc; + maintainers = with maintainers; [ sternenseemann ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/bisect_ppx/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/bisect_ppx/default.nix index eba0108199..ddeda86e9b 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/bisect_ppx/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/bisect_ppx/default.nix @@ -1,27 +1,28 @@ -{ lib, fetchFromGitHub, buildDunePackage, cmdliner, ocaml-migrate-parsetree, ppx_tools_versioned }: +{ lib, fetchFromGitHub, buildDunePackage, cmdliner, ppxlib }: buildDunePackage rec { pname = "bisect_ppx"; - version = "2.5.0"; - - useDune2 = true; + version = "2.6.1"; src = fetchFromGitHub { owner = "aantron"; repo = "bisect_ppx"; rev = version; - sha256 = "0w2qd1myvh333jvkf8hgrqzl8ns4xgfggk4frf1ij3jyc7qc0868"; + sha256 = "sha256-YeLDlH3mUbVEY4OmzlrvSwVUav3uMtSsTFlOsQKnz84="; }; + minimumOCamlVersion = "4.08"; + useDune2 = true; + buildInputs = [ cmdliner - ocaml-migrate-parsetree - ppx_tools_versioned + ppxlib ]; - meta = { - description = "Code coverage for OCaml"; - license = lib.licenses.mit; + meta = with lib; { + description = "Bisect_ppx is a code coverage tool for OCaml and Reason. It helps you test thoroughly by showing what's not tested."; + license = licenses.mit; homepage = "https://github.com/aantron/bisect_ppx"; + maintainers = with maintainers; [ ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/bz2/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/bz2/default.nix new file mode 100644 index 0000000000..52a92d3a8d --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/bz2/default.nix @@ -0,0 +1,41 @@ +{ lib, stdenv, fetchFromGitLab, ocaml, findlib, bzip2, autoreconfHook }: + +if !lib.versionAtLeast ocaml.version "4.02" +then throw "bz2 is not available for OCaml ${ocaml.version}" +else + +stdenv.mkDerivation rec { + pname = "ocaml${ocaml.version}-bz2"; + version = "0.7.0"; + + src = fetchFromGitLab { + owner = "irill"; + repo = "camlbz2"; + rev = version; + sha256 = "sha256-jBFEkLN2fbC3LxTu7C0iuhvNg64duuckBHWZoBxrV/U="; + }; + + autoreconfFlags = "-I ."; + + nativeBuildInputs = [ + autoreconfHook + ]; + + buildInputs = [ + ocaml + findlib + ]; + + propagatedBuildInputs = [ + bzip2 + ]; + + preInstall = "mkdir -p $OCAMLFIND_DESTDIR/stublibs"; + + meta = with lib; { + description = "OCaml bindings for the libbz2 (AKA, bzip2) (de)compression library"; + downloadPage = "https://gitlab.com/irill/camlbz2"; + license = licenses.lgpl21; + maintainers = with maintainers; [ superherointj ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/cairo2/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/cairo2/default.nix index 020006b19c..0a9922f678 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/cairo2/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/cairo2/default.nix @@ -1,18 +1,17 @@ -{ stdenv, lib, fetchurl, buildDunePackage, ocaml, dune-configurator -, pkg-config, cairo -}: +{ stdenv, lib, fetchurl, buildDunePackage, ocaml, dune-configurator, pkg-config, cairo }: buildDunePackage rec { pname = "cairo2"; - version = "0.6.1"; - - useDune2 = true; + version = "0.6.2"; src = fetchurl { url = "https://github.com/Chris00/ocaml-cairo/releases/download/${version}/cairo2-${version}.tbz"; - sha256 = "1ik4qf4b9443sliq2z7x9acd40rmzvyzjh3bh98wvjklxbb84a9i"; + sha256 = "sha256-a7P1kiVmIwT6Fhtwxs29ffgO4iexsulxUoc9cnJmEK4="; }; + minimalOCamlVersion = "4.02"; + useDune2 = true; + nativeBuildInputs = [ pkg-config ]; buildInputs = [ cairo dune-configurator ]; @@ -20,7 +19,7 @@ buildDunePackage rec { # https://github.com/Chris00/ocaml-cairo/issues/19 || lib.versionAtLeast ocaml.version "4.10"); - meta = { + meta = with lib; { homepage = "https://github.com/Chris00/ocaml-cairo"; description = "Binding to Cairo, a 2D Vector Graphics Library"; longDescription = '' @@ -29,7 +28,7 @@ buildDunePackage rec { the X Window System, Quartz, Win32, image buffers, PostScript, PDF, and SVG file output. ''; - license = lib.licenses.lgpl3; - maintainers = with lib.maintainers; [ jirkamarsik vbgl ]; + license = licenses.lgpl3; + maintainers = with maintainers; [ jirkamarsik vbgl ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/csexp/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/csexp/default.nix index 4bb83019dc..664d9a773a 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/csexp/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/csexp/default.nix @@ -2,23 +2,24 @@ buildDunePackage rec { pname = "csexp"; - version = "1.4.0"; - - useDune2 = true; - - minimumOCamlVersion = "4.02.3"; + version = "1.5.1"; src = fetchurl { url = "https://github.com/ocaml-dune/csexp/releases/download/${version}/csexp-${version}.tbz"; - sha256 = "sha256-jj1vyofxAqEm3ui3KioNFG8QQ5xHIY38FJ1Rvz7fNk4="; + sha256 = "sha256-1gXkBl+pCliABEDvLzOi2TE5i/LCIGGorLffhFwKrAI="; }; - propagatedBuildInputs = [ result ]; + minimumOCamlVersion = "4.03"; + useDune2 = true; + + propagatedBuildInputs = [ + result + ]; meta = with lib; { - homepage = "https://github.com/ocaml-dune/csexp"; + homepage = "https://github.com/ocaml-dune/csexp/"; description = "Minimal support for Canonical S-expressions"; license = licenses.mit; - maintainers = [ maintainers.marsam ]; + maintainers = with maintainers; [ marsam ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/cstruct/1.9.0.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/cstruct/1.9.0.nix deleted file mode 100644 index 750a153c1c..0000000000 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/cstruct/1.9.0.nix +++ /dev/null @@ -1,36 +0,0 @@ -{ lib, stdenv, fetchFromGitHub, ocaml, ocamlbuild, ocplib-endian, sexplib, findlib, ppx_tools -, async ? null, lwt ? null -}: - -assert lib.versionAtLeast ocaml.version "4.01"; - -let version = "1.9.0"; in - -let opt = b: "--${if b != null then "en" else "dis"}able"; in - -stdenv.mkDerivation { - name = "ocaml${ocaml.version}-cstruct-${version}"; - - src = fetchFromGitHub { - owner = "mirage"; - repo = "ocaml-cstruct"; - rev = "v${version}"; - sha256 = "1c1j21zgmxi9spq23imy7byn50qr7hlds1cfpzxlsx9dp309jngy"; - }; - - configureFlags = [ "${opt lwt}-lwt" "${opt async}-async" "${opt ppx_tools}-ppx" ]; - - buildInputs = [ ocaml findlib ocamlbuild ppx_tools lwt async ]; - propagatedBuildInputs = [ ocplib-endian sexplib ]; - - createFindlibDestdir = true; - dontStrip = true; - - meta = with lib; { - homepage = "https://github.com/mirage/ocaml-cstruct"; - description = "Map OCaml arrays onto C-like structs"; - license = lib.licenses.isc; - maintainers = [ maintainers.vbgl maintainers.ericbmerritt ]; - platforms = ocaml.meta.platforms or []; - }; -} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/cstruct/async.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/cstruct/async.nix new file mode 100644 index 0000000000..579f12776c --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/cstruct/async.nix @@ -0,0 +1,11 @@ +{ lib, buildDunePackage, cstruct, async_unix }: + +buildDunePackage rec { + pname = "cstruct-async"; + inherit (cstruct) src version meta useDune2; + + propagatedBuildInputs = [ + async_unix + cstruct + ]; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/cudf/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/cudf/default.nix new file mode 100644 index 0000000000..d2090cda67 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/cudf/default.nix @@ -0,0 +1,50 @@ +{ lib, fetchurl, stdenv, ocaml, ocamlbuild, findlib, ocaml_extlib, glib, perl, pkg-config, stdlib-shims, ounit }: + +stdenv.mkDerivation { + pname = "ocaml${ocaml.version}-cudf"; + version = "0.9"; + + src = fetchurl { + url = "https://gforge.inria.fr/frs/download.php/36602/cudf-0.9.tar.gz"; + sha256 = "sha256-mTLk2V3OI1sUNIYv84nM3reiirf0AuozG5ZzLCmn4Rw="; + }; + + buildFlags = [ + "all" + "opt" + ]; + nativeBuildInputs = [ + findlib + ocaml + ocamlbuild + pkg-config + ]; + buildInputs = [ + glib + perl + stdlib-shims + ]; + propagatedBuildInputs = [ + ocaml_extlib + ]; + + checkTarget = [ + "all" + "test" + ]; + checkInputs = [ + ounit + ]; + doCheck = true; + + preInstall = "mkdir -p $OCAMLFIND_DESTDIR"; + installFlags = "BINDIR=$(out)/bin"; + + meta = with lib; { + description = "A library for CUDF format"; + homepage = "http://www.mancoosi.org/cudf/"; + downloadPage = "https://gforge.inria.fr/projects/cudf/"; + license = licenses.lgpl3; + maintainers = with maintainers; [ superherointj ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/dose3/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/dose3/default.nix new file mode 100644 index 0000000000..3397527fd6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/dose3/default.nix @@ -0,0 +1,61 @@ +{ lib, buildDunePackage, fetchFromGitLab +, camlzip, ocamlgraph, parmap, re, stdlib-shims +, base64, bz2, ocaml_extlib, cudf +, dpkg, git, ocaml, ounit, python39, python39Packages +}: + +buildDunePackage rec { + pname = "dose3"; + version = "6.1"; + + src = fetchFromGitLab { + owner = "irill"; + repo = "dose3"; + rev = version; + sha256 = "sha256-RFChY7VH2pVD4u5U1qng46h9aAv8I/3yXVaNmFDmKFI="; + }; + + minimalOCamlVersion = "4.03"; + useDune2 = true; + + buildInputs = [ + parmap + ]; + + propagatedBuildInputs = [ + base64 + bz2 + camlzip + cudf + ocaml_extlib + ocamlgraph + re + stdlib-shims + ]; + + checkInputs = [ + dpkg # Replaces: conf-dpkg + git + ounit + python39 # Replaces: conf-python-3 + python39Packages.pyyaml # Replaces: conf-python3-yaml + ]; + doCheck = false; # Tests are failing. + # To enable tests use: lib.versionAtLeast ocaml.version "4.04"; + + meta = with lib; { + description = "Dose library (part of Mancoosi tools)"; + downloadPage = "https://gitlab.com/irill/dose3/"; + homepage = "http://www.mancoosi.org/software/"; + license = licenses.lgpl3Plus; + longDescription = '' + The dose suite provides libraries for handling package meta-data, and various tools for analyzing package relationships in a large package repository. + * dose-builddebcheck checks, given a collection of source package stanzas and a collection of binary package stanzas of Debian packages, whether the build-dependencies of each source package can be satisfied by the binary packages. + * dose-distcheck checks for every package of a distribution whether it is possible to satisfy its dependencies and conflicts within this distribution. + * ceve, a general metadata parser supporting different input formats (Debian, rpm, and others) and different output formats. + * dose-outdated, a Debian-specific tool for finding packages that are not installable with respect to a package repository, and that can only be made installable again by fixing the package itself. + * dose-challenged, a Debian-specific tool for checking which packages will certainly become uninstallable when some existing package is upgraded to a newer version. + * dose-deb-coinstall, a Debian-specific tool for checking whether a set of packages can be installed all together. + ''; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/fileutils/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/fileutils/default.nix index 39c41e8eba..819298ac8c 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/fileutils/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/fileutils/default.nix @@ -1,28 +1,30 @@ -{ stdenv, lib, fetchurl, ocaml, findlib, ocamlbuild, ounit }: +{ lib, fetchurl, buildDunePackage, stdlib-shims, ounit }: -stdenv.mkDerivation { - name = "ocaml${ocaml.version}-fileutils-0.5.3"; +buildDunePackage rec { + pname = "fileutils"; + version = "0.6.3"; src = fetchurl { - url = "https://forge.ocamlcore.org/frs/download.php/1728/ocaml-fileutils-0.5.3.tar.gz"; - sha256 = "1rc4cqlvdhbs55i85zfbfhz938fsy4fj6kwlkfm3ra7bpwn8bmpd"; + url = "https://github.com/gildor478/ocaml-fileutils/releases/download/v${version}/fileutils-v${version}.tbz"; + sha256 = "0qhlhc7fzcq0yfg1wyszsi0gyc4w9hyzmfv84aq9wc79i3283xgg"; }; - buildInputs = [ ocaml findlib ocamlbuild ounit ]; + minimumOCamlVersion = "4.03"; + useDune2 = true; - configureFlags = [ "--enable-tests" ]; + propagatedBuildInputs = [ + stdlib-shims + ]; + + checkInputs = [ + ounit + ]; doCheck = true; - checkTarget = "test"; - createFindlibDestdir = true; - - preInstall = "make doc"; - - meta = { - homepage = "https://forge.ocamlcore.org/projects/ocaml-fileutils/"; - platforms = ocaml.meta.platforms or []; - description = "Library to provide pure OCaml functions to manipulate real file (POSIX like) and filename"; - license = lib.licenses.lgpl21Plus; - maintainers = with lib.maintainers; [ vbgl ]; + meta = with lib; { + description = "OCaml API to manipulate real files (POSIX like) and filenames"; + homepage = "https://github.com/gildor478/ocaml-fileutils"; + license = licenses.lgpl21Plus; + maintainers = with maintainers; [ vbgl ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/fix/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/fix/default.nix index d4ce484653..ffd0b5003c 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/fix/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/fix/default.nix @@ -1,25 +1,24 @@ -{ lib, stdenv, fetchurl, ocaml, findlib, ocamlbuild }: +{ lib, fetchFromGitLab, buildDunePackage }: -assert lib.versionAtLeast (lib.getVersion ocaml) "3.12"; +buildDunePackage rec { + pname = "fix"; + version = "20201120"; -stdenv.mkDerivation { - - name = "ocaml-fix-20130611"; - - src = fetchurl { - url = "http://gallium.inria.fr/~fpottier/fix/fix-20130611.tar.gz"; - sha256 = "1phlqcs1nb93x9cf0w0hnq2ck4dmn71zm4mxf60w96vb9yb9qzp0"; + src = fetchFromGitLab { + domain = "gitlab.inria.fr"; + owner = "fpottier"; + repo = "fix"; + rev = "${version}"; + sha256 = "sha256-RO+JCG6R2i5uZfwTYEnQBCVq963fjv5lA2wA/8KrgMg="; }; - buildInputs = [ ocaml findlib ocamlbuild ]; - - createFindlibDestdir = true; + minimumOCamlVersion = "4.03"; + useDune2 = true; meta = with lib; { - homepage = "http://gallium.inria.fr/~fpottier/fix/"; + homepage = "https://gitlab.inria.fr/fpottier/fix/"; description = "A simple OCaml module for computing the least solution of a system of monotone equations"; license = licenses.cecill-c; - maintainers = [ maintainers.vbgl ]; - platforms = ocaml.meta.platforms or []; + maintainers = with maintainers; [ vbgl ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/index/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/index/default.nix index a24d72a344..61ecb65510 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/index/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/index/default.nix @@ -6,29 +6,41 @@ buildDunePackage rec { pname = "index"; - version = "1.3.0"; - - minimumOCamlVersion = "4.08"; - - useDune2 = true; + version = "1.3.1"; src = fetchurl { url = "https://github.com/mirage/index/releases/download/${version}/index-${version}.tbz"; - sha256 = "00qwhwg79scs5bgp8nbppv06qs9yhicf686q7lh64ngh0642iz6n"; + sha256 = "sha256-ycZi/TFLoGRloSpjYqH5FCHWP3eyiTCIDLESEn5inuI="; }; - buildInputs = [ stdlib-shims ]; + minimumOCamlVersion = "4.08"; + useDune2 = true; + + buildInputs = [ + stdlib-shims + ]; propagatedBuildInputs = [ - fmt logs mtime repr ppx_repr cmdliner progress semaphore-compat + cmdliner + fmt + logs + mtime + ppx_repr + progress + repr + semaphore-compat ]; + checkInputs = [ + alcotest + crowbar + re + ]; doCheck = true; - checkInputs = [ alcotest crowbar re ]; - meta = { - homepage = "https://github.com/mirage/index"; + meta = with lib; { description = "A platform-agnostic multi-level index"; - license = lib.licenses.mit; - maintainers = [ lib.maintainers.vbgl ]; + homepage = "https://github.com/mirage/index"; + license = licenses.mit; + maintainers = with maintainers; [ vbgl ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/lwt/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/lwt/default.nix index ee0c3b5b00..b0f73546ee 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/lwt/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/lwt/default.nix @@ -8,13 +8,13 @@ let inherit (lib) optional versionAtLeast; in buildDunePackage rec { pname = "lwt"; - version = "5.4.0"; + version = "5.4.1"; useDune2 = true; src = fetchzip { url = "https://github.com/ocsigen/${pname}/archive/${version}.tar.gz"; - sha256 = "1ay1zgadnw19r9hl2awfjr22n37l7rzxd9v73pjbahavwm2ay65d"; + sha256 = "0cq2qy23sa1a5zk6nja3c652mp29i84yfrkcwks6i8sdqwli36jy"; }; nativeBuildInputs = [ pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/magic-mime/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/magic-mime/default.nix index 2a5ff08c01..15628bcf26 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/magic-mime/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/magic-mime/default.nix @@ -1,27 +1,21 @@ -{ stdenv, lib, fetchzip, ocaml, findlib, ocamlbuild }: +{ lib, fetchurl, buildDunePackage }: -let version = "1.0.0"; in +buildDunePackage rec { + pname = "magic-mime"; + version = "1.1.3"; -stdenv.mkDerivation { - pname = "ocaml-magic-mime"; - inherit version; - - src = fetchzip { - url = "https://github.com/mirage/ocaml-magic-mime/archive/v${version}.tar.gz"; - sha256 = "058d83hmxd5mjccxdm3ydchmhk2lca5jdg82jg0klsigmf4ida6v"; + src = fetchurl { + url = "https://github.com/mirage/ocaml-magic-mime/releases/download/v${version}/magic-mime-v${version}.tbz"; + sha256 = "1xqjs8bba567yzrzgnr88j5ck97d36zw68zr9v29liya37k6rcvz"; }; - nativeBuildInputs = [ ocaml findlib ocamlbuild ]; - buildInputs = [ findlib ]; - configurePlatforms = []; + minimalOCamlVersion = "4.03"; + useDune2 = true; - createFindlibDestdir = true; - - meta = { - homepage = "https://github.com/mirage/ocaml-magic-mime"; + meta = with lib; { description = "Convert file extensions to MIME types"; - platforms = ocaml.meta.platforms or []; - license = lib.licenses.isc; - maintainers = with lib.maintainers; [ vbgl ]; + homepage = "https://github.com/mirage/ocaml-magic-mime"; + license = licenses.isc; + maintainers = with maintainers; [ vbgl ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/mccs/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/mccs/default.nix new file mode 100644 index 0000000000..3b396215e5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/mccs/default.nix @@ -0,0 +1,29 @@ +{ lib, fetchFromGitHub, buildDunePackage, cudf }: + +buildDunePackage rec { + pname = "mccs"; + version = "1.1+13"; + + src = fetchFromGitHub { + owner = "AltGr"; + repo = "ocaml-mccs"; + rev = version; + sha256 = "sha256-K249E9qkWNK4BC+ynaR3bVEyu9Tk8iCE7GptKk/aVJc="; + }; + + useDune2 = true; + + buildInputs = [ + cudf + ]; + + doCheck = true; + + meta = with lib; { + description = "A library providing a multi criteria CUDF solver, part of MANCOOSI project."; + downloadPage = "https://github.com/AltGr/ocaml-mccs"; + homepage = "https://www.i3s.unice.fr/~cpjm/misc/"; + license = with licenses; [ lgpl21 gpl3 ]; + maintainers = with maintainers; [ superherointj ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/ocaml-migrate-parsetree/2.1.x.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/ocaml-migrate-parsetree/2.x.nix similarity index 80% rename from third_party/nixpkgs/pkgs/development/ocaml-modules/ocaml-migrate-parsetree/2.1.x.nix rename to third_party/nixpkgs/pkgs/development/ocaml-modules/ocaml-migrate-parsetree/2.x.nix index ca88fe3241..dab537df22 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/ocaml-migrate-parsetree/2.1.x.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/ocaml-migrate-parsetree/2.x.nix @@ -2,15 +2,15 @@ buildDunePackage rec { pname = "ocaml-migrate-parsetree"; - version = "2.1.0"; + version = "2.2.0"; useDune2 = true; - minimumOCamlVersion = "4.02"; + minimalOCamlVersion = "4.02"; src = fetchurl { url = "https://github.com/ocaml-ppx/${pname}/releases/download/v${version}/${pname}-v${version}.tbz"; - sha256 = "07x7lm45kny0mi0fjvzw51445brm0dgy099cw0gpyly0wj77hyrq"; + sha256 = "188v3z09bg4gyv80c138fa3a3j2w54w5gc4r1ajw7klr70yqz9mj"; }; meta = { diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/ocaml-version/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/ocaml-version/default.nix index 4fde475cf9..a8912c0f5d 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/ocaml-version/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/ocaml-version/default.nix @@ -1,24 +1,21 @@ { lib, fetchurl, buildDunePackage }: buildDunePackage rec { - pname = "ocaml-version"; - version = "3.0.0"; - - minimumOCamlVersion = "4.07"; - - useDune2 = true; + version = "3.1.0"; src = fetchurl { url = "https://github.com/ocurrent/ocaml-version/releases/download/v${version}/ocaml-version-v${version}.tbz"; - sha256 = "15vk8sh50p3f2mbv8z7mqnx76cffri36f2krp25zkkwix8jg7ci4"; + sha256 = "sha256-rHuhagnY9yISdC85NpgPv667aYx7v2JRgq99ayw83l8="; }; - meta = { + minimumOCamlVersion = "4.07"; + useDune2 = true; + + meta = with lib; { description = "Manipulate, parse and generate OCaml compiler version strings"; homepage = "https://github.com/ocurrent/ocaml-version"; - license = lib.licenses.isc; - maintainers = [ lib.maintainers.vbgl ]; + license = licenses.isc; + maintainers = with maintainers; [ vbgl ]; }; - } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/ocamlgraph/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/ocamlgraph/default.nix index 5ae4f6ad3f..a7815d951c 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/ocamlgraph/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/ocamlgraph/default.nix @@ -1,39 +1,26 @@ -{ stdenv, lib, fetchurl, ocaml, findlib -, gtkSupport ? true -, lablgtk -}: +{ lib, fetchurl, buildDunePackage, stdlib-shims }: -stdenv.mkDerivation rec { +buildDunePackage rec { pname = "ocamlgraph"; - version = "1.8.8"; + version = "2.0.0"; src = fetchurl { - url = "http://ocamlgraph.lri.fr/download/ocamlgraph-${version}.tar.gz"; - sha256 = "0m9g16wrrr86gw4fz2fazrh8nkqms0n863w7ndcvrmyafgxvxsnr"; + url = "https://github.com/backtracking/ocamlgraph/releases/download/${version}/ocamlgraph-${version}.tbz"; + sha256 = "029692bvdz3hxpva9a2jg5w5381fkcw55ysdi8424lyyjxvjdzi0"; }; - buildInputs = [ ocaml findlib ] - ++ lib.optional gtkSupport lablgtk - ; + minimalOCamlVersion = "4.03"; + useDune2 = true; - createFindlibDestdir = true; + propagatedBuildInputs = [ + stdlib-shims + ]; - buildFlags = [ "all" ]; - installTargets = [ "install-findlib" ]; - - postInstall = lib.optionalString gtkSupport '' - mkdir -p $out/bin - cp dgraph/dgraph.opt $out/bin/graph-viewer - cp editor/editor.opt $out/bin/graph-editor - ''; - - meta = { - homepage = "http://ocamlgraph.lri.fr/"; - description = "Graph library for Objective Caml"; - license = lib.licenses.gpl2Oss; - platforms = ocaml.meta.platforms or []; - maintainers = [ - lib.maintainers.kkallio - ]; + meta = with lib; { + homepage = "http://ocamlgraph.lri.fr/"; + downloadPage = "https://github.com/backtracking/ocamlgraph"; + description = "Graph library for OCaml"; + license = licenses.gpl2Oss; + maintainers = with maintainers; [ kkallio superherointj ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/ocamlgraph/gtk.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/ocamlgraph/gtk.nix new file mode 100644 index 0000000000..1aa438ffa4 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/ocamlgraph/gtk.nix @@ -0,0 +1,12 @@ +{ buildDunePackage, lablgtk, ocamlgraph, stdlib-shims, ... }: + +buildDunePackage rec { + pname = "ocamlgraph_gtk"; + inherit (ocamlgraph) version src useDune2 meta; + + propagatedBuildInputs = [ + lablgtk + ocamlgraph + stdlib-shims + ]; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/ocplib-endian/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/ocplib-endian/default.nix index 553ad9562c..2cb066a7c0 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/ocplib-endian/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/ocplib-endian/default.nix @@ -1,24 +1,22 @@ -{ stdenv, lib, fetchzip, ocaml, findlib, ocamlbuild, cppo }: +{ lib, buildDunePackage, fetchzip, cppo }: -let version = "1.0"; in - -stdenv.mkDerivation { - name = "ocaml${ocaml.version}-ocplib-endian-${version}"; +buildDunePackage rec { + version = "1.1"; + pname = "ocplib-endian"; src = fetchzip { url = "https://github.com/OCamlPro/ocplib-endian/archive/${version}.tar.gz"; - sha256 = "0s1ld3kavz892b8awyxyg1mr98h2g61gy9ci5v6yb49bsii6wicw"; + sha256 = "sha256-zKsSkhlZBXSqPtw+/WN3pwo9plM9rDZfMbGVfosqb10="; }; - buildInputs = [ ocaml findlib ocamlbuild cppo ]; + useDune2 = true; - createFindlibDestdir = true; + buildInputs = [ cppo ]; - meta = { + meta = with lib; { description = "Optimised functions to read and write int16/32/64"; homepage = "https://github.com/OCamlPro/ocplib-endian"; - license = lib.licenses.lgpl21; - platforms = ocaml.meta.platforms or []; - maintainers = with lib.maintainers; [ vbgl ]; + license = licenses.lgpl21; + maintainers = with maintainers; [ vbgl ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/octavius/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/octavius/default.nix index c71c8f35f4..a4124df666 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/octavius/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/octavius/default.nix @@ -1,24 +1,25 @@ -{ stdenv, lib, fetchurl, ocaml, findlib, ocamlbuild, topkg }: +{ lib, fetchFromGitHub, buildDunePackage, ocaml }: -if !lib.versionAtLeast ocaml.version "4.03" -then throw "octavius is not available for OCaml ${ocaml.version}" else +buildDunePackage rec { + pname = "octavius"; + version = "1.2.2"; -stdenv.mkDerivation { - name = "ocaml${ocaml.version}-octavius-0.2.0"; - src = fetchurl { - url = "https://github.com/ocaml-doc/octavius/releases/download/v0.2.0/octavius-0.2.0.tbz"; - sha256 = "02milzzlr4xk5aymg2fjz27f528d5pyscqvld3q0dm41zcpkz5ml"; + src = fetchFromGitHub { + owner = "ocaml-doc"; + repo = "octavius"; + rev = "v${version}"; + sha256 = "sha256-/S6WpIo1c5J9uM3xgtAM/elhnsl0XimnIFsKy3ootbA="; }; - buildInputs = [ ocaml findlib ocamlbuild topkg ]; + minimumOCamlVersion = "4.03"; + useDune2 = lib.versionAtLeast ocaml.version "4.08"; - inherit (topkg) buildPhase installPhase; + doCheck = true; - meta = { + meta = with lib; { description = "Ocamldoc comment syntax parser"; homepage = "https://github.com/ocaml-doc/octavius"; - license = lib.licenses.isc; - maintainers = [ lib.maintainers.vbgl ]; - inherit (ocaml.meta) platforms; + license = licenses.isc; + maintainers = with maintainers; [ vbgl ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/opam-file-format/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/opam-file-format/default.nix index dd16a36988..d0ec77c455 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/opam-file-format/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/opam-file-format/default.nix @@ -1,22 +1,22 @@ -{ lib, buildDunePackage, fetchFromGitHub }: +{ lib, fetchFromGitHub, buildDunePackage }: buildDunePackage rec { - version = "2.1.2"; pname = "opam-file-format"; - - useDune2 = true; + version = "2.1.3"; src = fetchFromGitHub { owner = "ocaml"; repo = pname; rev = version; - sha256 = "19xppn2s3yjid8jc1wh8gdf5mgmlpzby2cf2slmnbyrgln3vj6i2"; + sha256 = "1fxhppdmrysr2nb5z3c448h17np48f3ga9jih33acj78r4rdblcs"; }; - meta = { + useDune2 = true; + + meta = with lib; { description = "Parser and printer for the opam file syntax"; - license = lib.licenses.lgpl21; - maintainers = [ lib.maintainers.vbgl ]; - inherit (src.meta) homepage; + license = licenses.lgpl21; + maintainers = with maintainers; [ vbgl ]; + homepage = "https://github.com/ocaml/opam-file-format/"; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/parmap/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/parmap/default.nix index 7adc8482b2..d79999087d 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/parmap/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/parmap/default.nix @@ -1,24 +1,28 @@ -{ lib, buildDunePackage, fetchurl, dune-configurator }: +{ lib, fetchurl, buildDunePackage, dune-configurator }: buildDunePackage rec { pname = "parmap"; - version = "1.2"; - - useDune2 = true; + version = "1.2.3"; src = fetchurl { url = "https://github.com/rdicosmo/${pname}/releases/download/${version}/${pname}-${version}.tbz"; - sha256 = "sha256-XUXptzD0eytaypaBQ+EBp4iVFRE6/Y0inS93t/YZrM8="; + sha256 = "1wg81slp453jci0gi0rzvdjx74110mlf1n5qpsmxic6fqsyz9d2v"; }; - buildInputs = [ dune-configurator ]; + minimalOCamlVersion = "4.03"; + useDune2 = true; + + buildInputs = [ + dune-configurator + ]; doCheck = true; meta = with lib; { description = "Library for multicore parallel programming"; + downloadPage = "https://github.com/rdicosmo/parmap"; homepage = "https://rdicosmo.github.io/parmap"; - maintainers = [ maintainers.bcdarwin ]; license = licenses.lgpl2; + maintainers = with maintainers; [ bcdarwin ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/ppx_deriving/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/ppx_deriving/default.nix index 7d415bd894..5563e61134 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/ppx_deriving/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/ppx_deriving/default.nix @@ -7,7 +7,7 @@ , result , ounit , ocaml-migrate-parsetree -, ocaml-migrate-parsetree-2-1 +, ocaml-migrate-parsetree-2 }: let params = @@ -40,7 +40,7 @@ buildDunePackage rec { buildInputs = [ ppxlib cppo ]; propagatedBuildInputs = [ (if params.useOMP2 - then ocaml-migrate-parsetree-2-1 + then ocaml-migrate-parsetree-2 else ocaml-migrate-parsetree) ppx_derivers result diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/ppx_gen_rec/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/ppx_gen_rec/default.nix index 87ccd85a07..ee801f6adf 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/ppx_gen_rec/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/ppx_gen_rec/default.nix @@ -1,22 +1,23 @@ -{ lib, fetchurl, buildDunePackage, ocaml-migrate-parsetree }: +{ lib, fetchurl, buildDunePackage, ppxlib }: buildDunePackage rec { pname = "ppx_gen_rec"; - version = "1.1.0"; - - useDune2 = true; + version = "2.0.0"; src = fetchurl { url = "https://github.com/flowtype/ocaml-${pname}/releases/download/v${version}/${pname}-v${version}.tbz"; - sha256 = "0fwi4bknq8h9zgpsarjvnzdm9bm8qlyyw0lz30pihg02aiiljqbh"; + sha256 = "sha256-/mMj5UT22KQGVy1sjgEoOgPzyCYyeDPtWJYNDvQ9nlk="; }; - buildInputs = [ ocaml-migrate-parsetree ]; + minimumOCamlVersion = "4.07"; + useDune2 = true; + + buildInputs = [ ppxlib ]; meta = with lib; { homepage = "https://github.com/flowtype/ocaml-ppx_gen_rec"; - description = "ocaml preprocessor that generates a recursive module"; + description = "A ppx rewriter that transforms a recursive module expression into a struct."; license = licenses.mit; - maintainers = [ maintainers.frontsideair ]; + maintainers = with maintainers; [ frontsideair ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/ppxlib/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/ppxlib/default.nix index c92992197d..a19d8cce52 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/ppxlib/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/ppxlib/default.nix @@ -4,7 +4,7 @@ then if lib.versionAtLeast ocaml.version "4.08" then "0.22.0" else "0.15.0" else "0.13.0" , ocaml-compiler-libs, ocaml-migrate-parsetree, ppx_derivers, stdio -, stdlib-shims, ocaml-migrate-parsetree-2-1 +, stdlib-shims, ocaml-migrate-parsetree-2 }: let param = { @@ -57,7 +57,7 @@ buildDunePackage rec { propagatedBuildInputs = [ ocaml-compiler-libs (if param.useOMP2 or true - then ocaml-migrate-parsetree-2-1 + then ocaml-migrate-parsetree-2 else ocaml-migrate-parsetree) ppx_derivers stdio diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/cli.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/cli.nix new file mode 100644 index 0000000000..1a4c020dc3 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/cli.nix @@ -0,0 +1,11 @@ +{ re, reason, pastel, ... }: + +{ + pname = "cli"; + + buildInputs = [ + re + reason + pastel + ]; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/console.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/console.nix new file mode 100644 index 0000000000..c11c12b467 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/console.nix @@ -0,0 +1,21 @@ +{ buildDunePackage, callPackage, reason, console, ... }: + +{ + pname = "console"; + + buildInputs = [ + reason + ]; + + passthru.tests = { + console = callPackage ./tests/console { + inherit buildDunePackage reason console; + }; + }; + + meta = { + description = "A library providing a web-influenced polymorphic console API for native Console.log(anything) with runtime printing"; + downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/console"; + homepage = "https://reason-native.com/docs/console/"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/default.nix new file mode 100644 index 0000000000..f65aa5159b --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/default.nix @@ -0,0 +1,43 @@ +{ newScope, lib, fetchFromGitHub, callPackage, buildDunePackage, atdgen, junit, qcheck-core, re, reason, reason-native }: + +let + generic = (somePath: + let + prepkg = import somePath { + inherit callPackage cli buildDunePackage atdgen junit qcheck-core re reason; + inherit (reason-native) console file-context-printer fp pastel rely; + }; + in + buildDunePackage + ({ + version = "2021-16-16-aec0ac6"; + src = fetchFromGitHub { + owner = "reasonml"; + repo = "reason-native"; + rev = "aec0ac681be7211b4d092262281689c46deb63e1"; + sha256 = "sha256-QoyI50MBY3RJBmM1y90n7oXrLmHe0CQxKojv+7YbegE="; + }; + useDune2 = true; + meta = with lib; { + description = "Libraries for building and testing native Reason programs"; + downloadPage = "https://github.com/reasonml/reason-native"; + homepage = "https://reason-native.com/"; + license = licenses.mit; + maintainers = with maintainers; [ superherointj ]; + } // (prepkg.meta or {}); + } // prepkg) + ); + cli = generic ./cli.nix; # Used only by Rely. +in + lib.makeScope newScope (self: with self; { + console = generic ./console.nix; + dir = generic ./dir.nix; + file-context-printer = generic ./file-context-printer.nix; + fp = generic ./fp.nix; + pastel = generic ./pastel.nix; + pastel-console = generic ./pastel-console.nix; + qcheck-rely = generic ./qcheck-rely.nix; + refmterr = generic ./refmterr.nix; + rely = generic ./rely.nix; + rely-junit-reporter = generic ./rely-junit-reporter.nix; + }) diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/dir.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/dir.nix new file mode 100644 index 0000000000..e6eb9c0c40 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/dir.nix @@ -0,0 +1,18 @@ +{ reason, fp, ... }: + +{ + pname = "dir"; + + buildInputs = [ + reason + ]; + + propagatedBuildInputs = [ + fp + ]; + + meta = { + description = "A library that provides a consistent API for common system, user and application directories consistently on all platforms"; + downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/dir"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/file-context-printer.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/file-context-printer.nix new file mode 100644 index 0000000000..749e727fee --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/file-context-printer.nix @@ -0,0 +1,20 @@ +{ reason, re, pastel, ... }: + +{ + pname = "file-context-printer"; + + buildInputs = [ + reason + ]; + + propagatedBuildInputs = [ + re + pastel + ]; + + meta = { + description = "Utility for displaying snippets of files on the command line"; + downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/file-context-printer"; + homepage = "https://reason-native.com/docs/file-context-printer/"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/fp.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/fp.nix new file mode 100644 index 0000000000..ae6ae50705 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/fp.nix @@ -0,0 +1,14 @@ +{ reason, ... }: + +{ + pname = "fp"; + + buildInputs = [ + reason + ]; + + meta = { + description = "A library for creating and operating on file paths consistently on multiple platforms"; + downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/fp"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/pastel-console.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/pastel-console.nix new file mode 100644 index 0000000000..f1d2c7cc72 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/pastel-console.nix @@ -0,0 +1,20 @@ +{ reason, console, pastel, ... }: + +{ + pname = "pastel-console"; + + buildInputs = [ + reason + ]; + + propagatedBuildInputs = [ + console + pastel + ]; + + meta = { + description = "Small library for pretty coloring to Console output"; + downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/pastel-console"; + homepage = "https://reason-native.com/docs/pastel/console"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/pastel.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/pastel.nix new file mode 100644 index 0000000000..a5abc4e219 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/pastel.nix @@ -0,0 +1,20 @@ +{ reason, re, ... }: + +{ + pname = "pastel"; + + minimalOCamlVersion = "4.05"; + + buildInputs = [ + reason + ]; + propagatedBuildInputs = [ + re + ]; + + meta = { + description = "A text formatting library that harnesses Reason JSX to provide intuitive terminal output. Like React but for CLI"; + downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/pastel"; + homepage = "https://reason-native.com/docs/pastel/"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/qcheck-rely.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/qcheck-rely.nix new file mode 100644 index 0000000000..a3d297b4f5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/qcheck-rely.nix @@ -0,0 +1,20 @@ +{ qcheck-core, reason, console, rely, ... }: + +{ + pname = "qcheck-rely"; + + buildInputs = [ + reason + ]; + + propagatedBuildInputs = [ + qcheck-core + console + rely + ]; + + meta = { + description = "A library containing custom Rely matchers allowing for easily using QCheck with Rely. QCheck is a 'QuickCheck inspired property-based testing for OCaml, and combinators to generate random values to run tests on'"; + downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/qcheck-rely"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/refmterr.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/refmterr.nix new file mode 100644 index 0000000000..9b14d4a8ba --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/refmterr.nix @@ -0,0 +1,21 @@ +{ atdgen, re, reason, pastel, ... }: + +{ + pname = "refmterr"; + + buildInputs = [ + reason + ]; + + propagatedBuildInputs = [ + atdgen + re + pastel + ]; + + meta = { + description = "An error formatter tool for Reason and OCaml. Takes raw error output from compiler and converts to pretty output"; + downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/refmterr"; + homepage = "https://reason-native.com/docs/refmterr/"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/rely-junit-reporter.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/rely-junit-reporter.nix new file mode 100644 index 0000000000..6e8b41bbd1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/rely-junit-reporter.nix @@ -0,0 +1,23 @@ +{ atdgen, junit, re, reason, pastel, rely, ... }: + +{ + pname = "rely-junit-reporter"; + + buildInputs = [ + atdgen + reason + ]; + + propagatedBuildInputs = [ + junit + re + pastel + rely + ]; + + meta = { + description = "A tool providing JUnit Reporter for Rely Testing Framework"; + downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/rely-junit-reporter"; + homepage = "https://reason-native.com/docs/rely/"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/rely.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/rely.nix new file mode 100644 index 0000000000..a2230426be --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/rely.nix @@ -0,0 +1,22 @@ +{ re, reason, cli, file-context-printer, pastel, ... }: + +{ + pname = "rely"; + + buildInputs = [ + reason + ]; + + propagatedBuildInputs = [ + re + cli + file-context-printer + pastel + ]; + + meta = { + description = "A Jest-inspired testing framework for native OCaml/Reason"; + downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/rely"; + homepage = "https://reason-native.com/docs/rely/"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/console-test.opam b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/console-test.opam new file mode 100644 index 0000000000..e69de29bb2 diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/console-test.re b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/console-test.re new file mode 100644 index 0000000000..15685205e1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/console-test.re @@ -0,0 +1 @@ +Console.log(Some("Hello fellow Nixer!")); /* {"Hello fellow Nixer!"} */ diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/default.nix new file mode 100644 index 0000000000..e1a995d33c --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/default.nix @@ -0,0 +1,20 @@ +{ lib, buildDunePackage, reason, console }: + +buildDunePackage rec { + pname = "console-test"; + version = "1"; + + src = ./.; + + useDune2 = true; + + buildInputs = [ + reason + console + ]; + + doInstallCheck = true; + postInstallCheck = '' + $out/bin/console-test | grep -q "{\"Hello fellow Nixer!\"}" > /dev/null + ''; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/dune b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/dune new file mode 100644 index 0000000000..49f2121385 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/reason-native/tests/console/dune @@ -0,0 +1,4 @@ +(executable + (name console-test) + (public_name console-test) + (libraries reason console.lib)) diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/repr/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/repr/default.nix index de6877ddd6..cd7e1e014e 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/repr/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/repr/default.nix @@ -1,30 +1,29 @@ -{ lib, buildDunePackage, fetchurl, fmt, uutf, jsonm, base64, either }: +{ lib, buildDunePackage, fetchurl, base64, either, fmt, jsonm, uutf }: buildDunePackage rec { pname = "repr"; - version = "0.2.1"; - - minimumOCamlVersion = "4.08"; + version = "0.3.0"; src = fetchurl { url = "https://github.com/mirage/${pname}/releases/download/${version}/${pname}-fuzz-${version}.tbz"; - sha256 = "1cbzbawbn71mmpw8y84s1p2pbhc055w1znz64jvr00c7fdr9p8hc"; + sha256 = "sha256-2b0v5RwutvyidzEDTEb5p33IvJ+3t2IW+KVxYD1ufXQ="; }; + minimumOCamlVersion = "4.08"; useDune2 = true; propagatedBuildInputs = [ - fmt - uutf - jsonm base64 either + fmt + jsonm + uutf ]; meta = with lib; { description = "Dynamic type representations. Provides no stability guarantee"; homepage = "https://github.com/mirage/repr"; license = licenses.isc; - maintainers = [ maintainers.sternenseemann ]; + maintainers = with maintainers; [ sternenseemann ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/repr/ppx.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/repr/ppx.nix index a1112ef9ac..7ef2c55c2c 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/repr/ppx.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/repr/ppx.nix @@ -1,4 +1,4 @@ -{ buildDunePackage, repr, ppxlib, ppx_deriving, alcotest, hex }: +{ buildDunePackage, ppx_deriving, ppxlib, repr, alcotest, hex }: buildDunePackage { pname = "ppx_repr"; @@ -6,9 +6,9 @@ buildDunePackage { inherit (repr) src version useDune2; propagatedBuildInputs = [ - repr - ppxlib ppx_deriving + ppxlib + repr ]; doCheck = true; diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/sha/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/sha/default.nix index a506e6795f..80a5205a23 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/sha/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/sha/default.nix @@ -1,28 +1,29 @@ -{ lib -, fetchurl -, buildDunePackage -, ounit -}: +{ lib, fetchurl, buildDunePackage, stdlib-shims, ounit }: buildDunePackage rec { pname = "sha"; - version = "1.13"; - - useDune2 = true; + version = "1.14"; src = fetchurl { url = "https://github.com/djs55/ocaml-${pname}/releases/download/v${version}/${pname}-v${version}.tbz"; - sha256 = "00z2s4fsv9i1h09rj5dy3nd9hhcn79b75sn2ljj5wihlf4y4g304"; + sha256 = "114vydrfdp7fayigvgk3ckiby0kh4n49c1j53v8k40gk6nzm3l19"; }; + useDune2 = true; + + propagatedBuildInputs = [ + stdlib-shims + ]; + doCheck = true; - checkInputs = [ ounit ]; + checkInputs = [ + ounit + ]; meta = with lib; { description = "Binding for SHA interface code in OCaml"; - maintainers = [ maintainers.arthurteisseire ]; - homepage = "https://github.com/djs55/ocaml-${pname}"; + homepage = "https://github.com/djs55/ocaml-sha/"; license = licenses.isc; + maintainers = with maintainers; [ arthurteisseire ]; }; - } diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/async.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/async.nix new file mode 100644 index 0000000000..ceac7a7c07 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/async.nix @@ -0,0 +1,21 @@ +{ lib, buildDunePackage, tls, async, cstruct-async, core, cstruct, mirage-crypto-rng-async }: + +buildDunePackage rec { + pname = "tls-async"; + + inherit (tls) src meta version; + + minimumOCamlVersion = "4.08"; + useDune2 = true; + + doCheck = true; + + propagatedBuildInputs = [ + async + core + cstruct + cstruct-async + mirage-crypto-rng-async + tls + ]; +} diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/default.nix index dadeb5a98e..5a5479c9fe 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/default.nix @@ -1,28 +1,47 @@ -{ lib, fetchurl, buildDunePackage, ppx_sexp_conv, ppx_cstruct, cstruct -, cstruct-sexp, sexplib, mirage-crypto, mirage-crypto-pk, mirage-crypto-rng -, x509, domain-name, fmt, cstruct-unix, ounit2, ocaml_lwt, ptime, rresult -, mirage-crypto-ec, hkdf, logs, alcotest }: +{ lib, fetchurl, buildDunePackage +, cstruct, cstruct-sexp, domain-name, fmt, ppx_cstruct, ppx_sexp_conv, logs, hkdf, mirage-crypto, mirage-crypto-ec, mirage-crypto-pk, mirage-crypto-rng, ocaml_lwt, ptime, rresult, sexplib, x509 +, alcotest, cstruct-unix, ounit2, randomconv +}: buildDunePackage rec { - minimumOCamlVersion = "4.08"; - - version = "0.13.1"; pname = "tls"; + version = "0.13.2"; src = fetchurl { url = "https://github.com/mirleft/ocaml-tls/releases/download/v${version}/tls-v${version}.tbz"; - sha256 = "ca95fa59a82f7d38b0b495fc0cd1ff54e7728492a292895d0067c1ba9de81b7b"; + sha256 = "sha256-IE6Fuvem8A3lZ/M8GLNYNwCG+v7BbPQ4QdYS+fKT50c="; }; + minimumOCamlVersion = "4.08"; useDune2 = true; - doCheck = true; - checkInputs = [ cstruct-unix ounit2 alcotest ]; + propagatedBuildInputs = [ + cstruct + cstruct-sexp + domain-name + fmt + ppx_cstruct + ppx_sexp_conv + logs + hkdf + mirage-crypto + mirage-crypto-ec + mirage-crypto-pk + mirage-crypto-rng + ocaml_lwt + ptime + rresult + sexplib + x509 + ]; - propagatedBuildInputs = [ ppx_sexp_conv ppx_cstruct cstruct cstruct-sexp - sexplib mirage-crypto mirage-crypto-pk mirage-crypto-rng - x509 domain-name fmt ocaml_lwt ptime mirage-crypto-ec - hkdf logs rresult ]; + doCheck = true; + checkInputs = [ + alcotest + cstruct-unix + ounit2 + randomconv + ]; meta = with lib; { homepage = "https://github.com/mirleft/ocaml-tls"; diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/mirage.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/mirage.nix index 18d0f08357..a0428536b8 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/mirage.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/tls/mirage.nix @@ -1,25 +1,23 @@ { buildDunePackage, tls -, x509, lwt, fmt, mirage-flow, mirage-kv, mirage-clock, ptime -, mirage-crypto, mirage-crypto-pk, mirage-crypto-ec +, fmt, lwt, mirage-clock, mirage-crypto, mirage-crypto-ec, mirage-crypto-pk, mirage-flow, mirage-kv, ptime, x509 }: buildDunePackage { pname = "tls-mirage"; - - inherit (tls) version src useDune2 minimumOCamlVersion; + inherit (tls) src version minimumOCamlVersion useDune2; propagatedBuildInputs = [ - tls - x509 - lwt fmt + lwt + mirage-clock + mirage-crypto + mirage-crypto-ec + mirage-crypto-pk mirage-flow mirage-kv - mirage-clock ptime - mirage-crypto - mirage-crypto-pk - mirage-crypto-ec + tls + x509 ]; meta = tls.meta // { diff --git a/third_party/nixpkgs/pkgs/development/ocaml-modules/torch/default.nix b/third_party/nixpkgs/pkgs/development/ocaml-modules/torch/default.nix index 5f59b4ae05..4126e33048 100644 --- a/third_party/nixpkgs/pkgs/development/ocaml-modules/torch/default.nix +++ b/third_party/nixpkgs/pkgs/development/ocaml-modules/torch/default.nix @@ -56,5 +56,6 @@ buildDunePackage rec { description = "Ocaml bindings to Pytorch"; maintainers = [ maintainers.bcdarwin ]; license = licenses.asl20; + broken = true; }; } diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/arduino/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/arduino/default.nix index f6536108e6..77089827c4 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/arduino/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/arduino/default.nix @@ -7,11 +7,11 @@ buildOctavePackage rec { pname = "arduino"; - version = "0.6.0"; + version = "0.7.0"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "0fnfk206n31s7diijaylmqhxnr88z6l3l3vsxq4z8gcp9ylm9nkj"; + sha256 = "0r0bcq2zkwba6ab6yi6czbhrj4adm9m9ggxmzzcd9h40ckqg6wjv"; }; requiredOctavePackages = [ diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/audio/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/audio/default.nix index 4fafefd6f7..0cb0374608 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/audio/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/audio/default.nix @@ -2,7 +2,7 @@ , lib , fetchurl , jack2 -, alsaLib +, alsa-lib , rtmidi , pkg-config }: @@ -22,7 +22,7 @@ buildOctavePackage rec { propagatedBuildInputs = [ jack2 - alsaLib + alsa-lib rtmidi ]; @@ -31,6 +31,6 @@ buildOctavePackage rec { license = licenses.gpl3Plus; maintainers = with maintainers; [ KarlJoad ]; description = "Audio and MIDI Toolbox for GNU Octave"; - platforms = platforms.linux; # Because of run-time dependency on jack2 and alsaLib + platforms = platforms.linux; # Because of run-time dependency on jack2 and alsa-lib }; } diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/communications/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/communications/default.nix index 492c837255..6c517ec6e5 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/communications/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/communications/default.nix @@ -7,11 +7,11 @@ buildOctavePackage rec { pname = "communications"; - version = "1.2.2"; + version = "1.2.3"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "1xay2vjyadv3ja8dmqqzm2his8s0rvidz23nq1c2yl3xh1gavyck"; + sha256 = "1r4r0cia5l5fann1n78c1qdc6q8nizgb09n2fdwb76xnwjan23g3"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/control/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/control/default.nix index 2d61e30cc6..b69343b1b4 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/control/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/control/default.nix @@ -7,11 +7,11 @@ buildOctavePackage rec { pname = "control"; - version = "3.2.0"; + version = "3.3.0"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "0gjyjsxs01x0nyc4cgn3d5af17l3lzs8h4hsm57nxd3as48dbwgs"; + sha256 = "1yksifligq2z3siqw701iq2ydgnj7pnkcw42bfmydcf6fc4drlvy"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/fuzzy-logic-toolkit/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/fuzzy-logic-toolkit/default.nix index 5cb567b2bb..dc230ef18a 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/fuzzy-logic-toolkit/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/fuzzy-logic-toolkit/default.nix @@ -5,11 +5,11 @@ buildOctavePackage rec { pname = "fuzzy-logic-toolkit"; - version = "0.4.5"; + version = "0.4.6"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "0cs1xh594h1psdinicxrsvm27gzax5jja7bjk4sl3kk2hv24mhml"; + sha256 = "126x0wjjqmwwgynsgjfdh5rlnww5bsl5hxq1xib15i58mrglh5cd"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/instrument-control/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/instrument-control/default.nix index 51c8f300cc..17d9186da7 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/instrument-control/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/instrument-control/default.nix @@ -5,11 +5,11 @@ buildOctavePackage rec { pname = "instrument-control"; - version = "0.6.0"; + version = "0.7.0"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "0vckax6rx5v3fq5j6kb6n39a5zas9i24x4wvmjlhc8xbykkg5nkk"; + sha256 = "0cdnnbxihz7chdkhkcgy46pvkij43z9alwr88627z7jaiaah6xby"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/matgeom/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/matgeom/default.nix index b8607cf5df..c74b8b00cf 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/matgeom/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/matgeom/default.nix @@ -5,11 +5,11 @@ buildOctavePackage rec { pname = "matgeom"; - version = "1.2.2"; + version = "1.2.3"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "05xfmlh1k3mhq8yag7gr8q1ysl1s43vm46fr1i3gcg9b1kkwi8by"; + sha256 = "12q66dy4ninhki3jslzcamfblcb3cdkfbbzn3a5har1s212lsfiw"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/nan/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/nan/default.nix index a0517db714..f492d4440b 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/nan/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/nan/default.nix @@ -6,11 +6,11 @@ buildOctavePackage rec { pname = "nan"; - version = "3.5.2"; + version = "3.5.3"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "0bp8zl50f8qj5sivl88kjdswm035v4li33fiq3v1gmh0pvgbcw7a"; + sha256 = "1jailahbrh847875vszibn68lp4n5sdy68q51i7hd64qix8rmmpx"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/nurbs/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/nurbs/default.nix index e5e26d7bb9..fbd67a0a46 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/nurbs/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/nurbs/default.nix @@ -5,22 +5,13 @@ buildOctavePackage rec { pname = "nurbs"; - version = "1.3.13"; + version = "1.4.3"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "0zkyldm63pc3pcal3yvj6af24cvpjvv9qfhf0ihhwcsh4w3yggyv"; + sha256 = "16r05av75nvmkz1knf0nv0gj4fcjjf3jnyf94bdgxf84wahncim7"; }; - # Has been fixed in more recent commits, but has not been pushed out as a - # new version yet. - # The sed changes allow nurbs to compile. - patchPhase = '' - sed -i s/feval/octave::feval/g src/*.cc - sed -i s/is_real_type/isreal/g src/*.cc - sed -i s/is_cell/iscell/g src/*.cc - ''; - meta = with lib; { homepage = "https://octave.sourceforge.io/nurbs/index.html"; license = licenses.gpl3Plus; diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/optim/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/optim/default.nix index b9561faafb..57a606d3d5 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/optim/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/optim/default.nix @@ -9,11 +9,11 @@ buildOctavePackage rec { pname = "optim"; - version = "1.6.0"; + version = "1.6.1"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "1z2h8gy99glxh5qi3r22am2vdirlbklkq0lx4r8jrx1ak7awh47r"; + sha256 = "1175bckiryz0i6zm8zvq7y5rq3lwkmhyiky1gbn33np9qzxcsl3i"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/parallel/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/parallel/default.nix index 0ea1d4d9df..11fba7d363 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/parallel/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/parallel/default.nix @@ -8,11 +8,11 @@ buildOctavePackage rec { pname = "parallel"; - version = "4.0.0"; + version = "4.0.1"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "0wmpak01rsccrnb8is7fsjdlxw15157sqyf9s2fabr16yykfmvi8"; + sha256 = "1h8vw2r42393px6dk10y3lhpxl168r9d197f9whz6lbk2rg571pa"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/splines/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/splines/default.nix index 69d5e46147..9a249c4674 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/splines/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/splines/default.nix @@ -5,11 +5,11 @@ buildOctavePackage rec { pname = "splines"; - version = "1.3.3"; + version = "1.3.4"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "16wisph8axc5xci0h51zj0y0x2wj6c9zybi2sjpb9v8z9dagjjqa"; + sha256 = "11a34f6a7615fc8x1smk3lx8vslilx4mrxi8f01la3wq68khnq5f"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/struct/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/struct/default.nix index a69a8e4b6e..bd173aab1e 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/struct/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/struct/default.nix @@ -5,11 +5,11 @@ buildOctavePackage rec { pname = "struct"; - version = "1.0.16"; + version = "1.0.17"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "0gx20r126f0ccl4yflp823xi77p8fh4acx1fv0mmcsglmx4c4vgm"; + sha256 = "0cw4cspkm553v019zsj2bsmal0i378pm0hv29w82j3v5vysvndq1"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/octave-modules/windows/default.nix b/third_party/nixpkgs/pkgs/development/octave-modules/windows/default.nix index 274ba1e3b7..bed63aef92 100644 --- a/third_party/nixpkgs/pkgs/development/octave-modules/windows/default.nix +++ b/third_party/nixpkgs/pkgs/development/octave-modules/windows/default.nix @@ -5,11 +5,11 @@ buildOctavePackage rec { pname = "windows"; - version = "1.5.0"; + version = "1.6.1"; src = fetchurl { url = "mirror://sourceforge/octave/${pname}-${version}.tar.gz"; - sha256 = "05bsf3q816b9vwgmjdm761ybhmk8raq6dzxqvd11brma0granx3a"; + sha256 = "110dh6jz088c4fxp9gw79kfib0dl7r3rkcavxx4xpk7bjl2l3xb6"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/pharo/vm/build-vm-legacy.nix b/third_party/nixpkgs/pkgs/development/pharo/vm/build-vm-legacy.nix index c00c92a6c3..88ef9f9efd 100644 --- a/third_party/nixpkgs/pkgs/development/pharo/vm/build-vm-legacy.nix +++ b/third_party/nixpkgs/pkgs/development/pharo/vm/build-vm-legacy.nix @@ -10,7 +10,7 @@ , libGL , freetype , xorg -, alsaLib +, alsa-lib , cairo , libuuid , libnsl @@ -30,10 +30,10 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ unzip cmake gcc makeWrapper ]; buildInputs = [ bash glibc openssl libGLU libGL freetype - xorg.libX11 xorg.libICE xorg.libSM alsaLib cairo pharo-share libnsl ]; + xorg.libX11 xorg.libICE xorg.libSM alsa-lib cairo pharo-share libnsl ]; LD_LIBRARY_PATH = lib.makeLibraryPath - [ cairo libGLU libGL freetype openssl libuuid alsaLib + [ cairo libGLU libGL freetype openssl libuuid alsa-lib xorg.libICE xorg.libSM ]; preConfigure = '' diff --git a/third_party/nixpkgs/pkgs/development/pharo/vm/build-vm.nix b/third_party/nixpkgs/pkgs/development/pharo/vm/build-vm.nix index c1f703f725..498e5c4147 100644 --- a/third_party/nixpkgs/pkgs/development/pharo/vm/build-vm.nix +++ b/third_party/nixpkgs/pkgs/development/pharo/vm/build-vm.nix @@ -8,7 +8,7 @@ , libGLU, libGL , freetype , xorg -, alsaLib +, alsa-lib , cairo , libuuid , autoreconfHook @@ -64,7 +64,7 @@ stdenv.mkDerivation rec { xorg.libX11 xorg.libICE xorg.libSM - alsaLib + alsa-lib cairo pharo-share libuuid @@ -115,7 +115,7 @@ stdenv.mkDerivation rec { freetype openssl libuuid - alsaLib + alsa-lib xorg.libICE xorg.libSM ]; diff --git a/third_party/nixpkgs/pkgs/development/pharo/vm/vms.nix b/third_party/nixpkgs/pkgs/development/pharo/vm/vms.nix index a8e3236a3a..a51366820a 100644 --- a/third_party/nixpkgs/pkgs/development/pharo/vm/vms.nix +++ b/third_party/nixpkgs/pkgs/development/pharo/vm/vms.nix @@ -11,7 +11,7 @@ , libGLU, libGL , freetype , xorg -, alsaLib +, alsa-lib , cairo , libuuid , autoreconfHook diff --git a/third_party/nixpkgs/pkgs/development/php-packages/apcu/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/apcu/default.nix index 5aa8b2b4f9..0cfc7b4b44 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/apcu/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/apcu/default.nix @@ -13,5 +13,10 @@ buildPecl { makeFlags = [ "phpincludedir=$(dev)/include" ]; outputs = [ "out" "dev" ]; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "Userland cache for PHP"; + license = licenses.php301; + homepage = "https://pecl.php.net/package/APCu"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/apcu_bc/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/apcu_bc/default.nix index 448c25bee6..e487a075db 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/apcu_bc/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/apcu_bc/default.nix @@ -14,6 +14,11 @@ buildPecl { mv $out/lib/php/extensions/apc.so $out/lib/php/extensions/apcu_bc.so ''; - meta.maintainers = lib.teams.php.members; - meta.broken = lib.versionAtLeast php.version "8"; + meta = with lib; { + description = "APCu Backwards Compatibility Module"; + license = licenses.php301; + homepage = "https://pecl.php.net/package/apcu_bc"; + maintainers = teams.php.members; + broken = versionAtLeast php.version "8"; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/ast/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/ast/default.nix index fb609b9f04..65e734e925 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/ast/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/ast/default.nix @@ -3,8 +3,13 @@ buildPecl { pname = "ast"; - version = "1.0.10"; - sha256 = "13s5r1szd80g1mqickghdd38mvjkwss221322mmbrykcfgp4fs30"; + version = "1.0.12"; + sha256 = "1mcfx989yrakixlsx2d8v6kyxawfwhig4mra9ccpjasfhad0d31x"; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "Exposes the abstract syntax tree generated by PHP"; + license = licenses.bsd3; + homepage = "https://pecl.php.net/package/ast"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/composer/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/composer/default.nix index f749ddf8cc..aaa698e6d0 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/composer/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/composer/default.nix @@ -1,14 +1,14 @@ { mkDerivation, fetchurl, makeWrapper, unzip, lib, php }: let pname = "composer"; - version = "2.1.1"; + version = "2.1.3"; in mkDerivation { inherit pname version; src = fetchurl { url = "https://getcomposer.org/download/${version}/composer.phar"; - sha256 = "1ki106973q74inwgd4hjmml905rqg82808qq4wiysrkr7mzmfnj4"; + sha256 = "04ad2zsnf8qi6hzs9sak6y8xxyx8l0f7crmcimnp7nn8vsc2x9zq"; }; dontUnpack = true; diff --git a/third_party/nixpkgs/pkgs/development/php-packages/couchbase/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/couchbase/default.nix index 6d6bdf76e4..7e72af65a3 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/couchbase/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/couchbase/default.nix @@ -1,7 +1,7 @@ -{ lib, buildPecl, fetchFromGitHub, writeText, libcouchbase, zlib, php }: +{ lib, buildPecl, fetchFromGitHub, writeText, libcouchbase, zlib, php, substituteAll }: let pname = "couchbase"; - version = "2.6.2"; + version = "3.1.2"; in buildPecl { inherit pname version; @@ -10,40 +10,25 @@ buildPecl { owner = "couchbase"; repo = "php-couchbase"; rev = "v${version}"; - sha256 = "0ymrymnz91qg9b2ns044qg46wc65dffhxx402wpx1b5cj2vr4ma3"; + sha256 = "0zm2jm5lzjjqlhkiivm4v5gr4286pwqaf5nar1ga816hhwnyhj42"; }; configureFlags = [ "--with-couchbase" ]; buildInputs = [ libcouchbase zlib ]; internalDeps = lib.optionals (lib.versionOlder php.version "8.0") [ php.extensions.json ]; - peclDeps = [ php.extensions.igbinary ]; patches = [ - (writeText "php-couchbase.patch" '' - --- a/config.m4 - +++ b/config.m4 - @@ -9,7 +9,7 @@ if test "$PHP_COUCHBASE" != "no"; then - LIBCOUCHBASE_DIR=$PHP_COUCHBASE - else - AC_MSG_CHECKING(for libcouchbase in default path) - - for i in /usr/local /usr; do - + for i in ${libcouchbase}; do - if test -r $i/include/libcouchbase/couchbase.h; then - LIBCOUCHBASE_DIR=$i - AC_MSG_RESULT(found in $i) - @@ -154,6 +154,8 @@ COUCHBASE_FILES=" \ - igbinary_inc_path="$phpincludedir" - elif test -f "$phpincludedir/ext/igbinary/igbinary.h"; then - igbinary_inc_path="$phpincludedir" - + elif test -f "${php.extensions.igbinary.dev}/include/ext/igbinary/igbinary.h"; then - + igbinary_inc_path="${php.extensions.igbinary.dev}/include" - fi - if test "$igbinary_inc_path" = ""; then - AC_MSG_WARN([Cannot find igbinary.h]) - '') + (substituteAll { + src = ./libcouchbase.patch; + inherit libcouchbase; + }) ]; - meta.broken = lib.versionAtLeast php.version "8.0"; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "Couchbase Server PHP extension"; + license = licenses.asl20; + homepage = "https://docs.couchbase.com/php-sdk/current/project-docs/sdk-release-notes.html"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/couchbase/libcouchbase.patch b/third_party/nixpkgs/pkgs/development/php-packages/couchbase/libcouchbase.patch new file mode 100644 index 0000000000..cd08da781a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/php-packages/couchbase/libcouchbase.patch @@ -0,0 +1,11 @@ +--- a/config.m4 ++++ b/config.m4 +@@ -28,7 +28,7 @@ if test "$PHP_COUCHBASE" != "no"; then + + dnl fallback on standard directory + else +- for i in /usr/local /usr; do ++ for i in @libcouchbase@; do + if test -r $i/include/libcouchbase/couchbase.h; then + LIBCOUCHBASE_DIR=$i + AC_MSG_RESULT(found in $i) diff --git a/third_party/nixpkgs/pkgs/development/php-packages/event/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/event/default.nix index 420f2385e5..ed23bcc4b0 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/event/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/event/default.nix @@ -2,8 +2,8 @@ buildPecl { pname = "event"; - version = "3.0.2"; - sha256 = "1ws4l014z52vb23xbsfj6viwkf7fmh462af639xgbp0n6syf77dq"; + version = "3.0.5"; + sha256 = "0q5a83mcl97cyry5rd85j5xsjvflnki6s5cm56igjm0szxvgj39c"; configureFlags = [ "--with-event-libevent-dir=${libevent.dev}" diff --git a/third_party/nixpkgs/pkgs/development/php-packages/igbinary/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/igbinary/default.nix index 7a321cc90b..258b0debba 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/igbinary/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/igbinary/default.nix @@ -3,12 +3,17 @@ buildPecl { pname = "igbinary"; - version = "3.2.1"; - sha256 = "sha256-YBYgz/07PlWWIAmcBWm4xCR/Ap7BitwCBr8m+ONXU9s="; + version = "3.2.3"; + sha256 = "1ffaqhckkk1qr5dk1fl7f8dm2w4lj4gqrgazzmc67acsdmp7z5f0"; configureFlags = [ "--enable-igbinary" ]; makeFlags = [ "phpincludedir=$(dev)/include" ]; outputs = [ "out" "dev" ]; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "Binary serialization for PHP"; + license = licenses.bsd3; + homepage = "https://github.com/igbinary/igbinary/"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/imagick/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/imagick/default.nix index 744ba2302f..7da324b2e1 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/imagick/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/imagick/default.nix @@ -1,27 +1,19 @@ -{ buildPecl, fetchpatch, lib, imagemagick, pkg-config, pcre2 }: +{ buildPecl, lib, imagemagick, pkg-config, pcre2 }: buildPecl { pname = "imagick"; - version = "3.4.4"; - sha256 = "0xvhaqny1v796ywx83w7jyjyd0nrxkxf34w9zi8qc8aw8qbammcd"; - - patches = [ - # Fix compatibility with PHP 8. - (fetchpatch { - url = "https://github.com/Imagick/imagick/pull/336.patch"; - sha256 = "nuRdh02qaMx0s/5OzlfWjyYgZG1zgrYnAjsZ/UVIrUM="; - }) - # Fix detection of ImageMagick 7. - (fetchpatch { - url = "https://github.com/Imagick/imagick/commit/09551fbf38c16cdaf4ade7c08744501cd82d2747.patch"; - sha256 = "qUeQHP08kKOzuQdEpR8RSZ18Yhi0U9z24KwQcAx1UVg="; - }) - ]; + version = "3.5.0"; + sha256 = "0afjyll6rr79am6d1p041bl4dj44hp9z4gzmlhrkvkdsdz1vfpbr"; configureFlags = [ "--with-imagick=${imagemagick.dev}" ]; nativeBuildInputs = [ pkg-config ]; buildInputs = [ pcre2 ]; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "Imagick is a native php extension to create and modify images using the ImageMagick API"; + license = licenses.php301; + homepage = "https://pecl.php.net/package/imagick"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/mailparse/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/mailparse/default.nix index 820bbbdbad..1981b3d6ae 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/mailparse/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/mailparse/default.nix @@ -11,5 +11,10 @@ buildPecl { echo "#define HAVE_MBSTRING 1" >> config.h ''; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "Mailparse is an extension for parsing and working with email messages"; + license = licenses.php301; + homepage = "https://pecl.php.net/package/mailparse"; + maintainers = lib.teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/maxminddb/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/maxminddb/default.nix index 9a5a96e15c..eae232b6c0 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/maxminddb/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/maxminddb/default.nix @@ -1,7 +1,7 @@ { buildPecl, lib, fetchFromGitHub, libmaxminddb }: let pname = "maxminddb"; - version = "1.10.0"; + version = "1.10.1"; in buildPecl { inherit pname version; @@ -10,7 +10,7 @@ buildPecl { owner = "maxmind"; repo = "MaxMind-DB-Reader-php"; rev = "v${version}"; - sha256 = "sha256-2SnajDdO5uAYcuVpEbOuFlZzMxwo/EqFtUSr9XxT0KQ="; + sha256 = "1m5y733x4ykldi1pym54mdahfwfnwy2r1n6fnndwi8jz9px9pa5k"; }; buildInputs = [ libmaxminddb ]; @@ -19,6 +19,7 @@ buildPecl { meta = with lib; { description = "C extension that is a drop-in replacement for MaxMind\\Db\\Reader"; license = with licenses; [ asl20 ]; + homepage = "https://github.com/maxmind/MaxMind-DB-Reader-php"; maintainers = with maintainers; [ ajs124 das_j ] ++ teams.php.members; }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/memcached/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/memcached/default.nix index 4880e08e06..0aea58572c 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/memcached/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/memcached/default.nix @@ -26,5 +26,10 @@ buildPecl { nativeBuildInputs = [ pkg-config ]; buildInputs = [ cyrus_sasl zlib ]; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "PHP extension for interfacing with memcached via libmemcached library"; + license = licenses.php301; + homepage = "https://github.com/php-memcached-dev/php-memcached"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/mongodb/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/mongodb/default.nix index d0e5e545f6..b65862750e 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/mongodb/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/mongodb/default.nix @@ -1,11 +1,21 @@ -{ stdenv, buildPecl, lib, pcre2, pkg-config, cyrus_sasl, icu64 -, openssl, snappy, zlib, darwin }: +{ stdenv +, buildPecl +, lib +, pcre2 +, pkg-config +, cyrus_sasl +, icu64 +, openssl +, snappy +, zlib +, darwin +}: buildPecl { pname = "mongodb"; - version = "1.9.0"; - sha256 = "16mbw3p80qxsj86nmjbfch8wv6jaq8wbz4rlpmixvhj9nwbp37hs"; + version = "1.9.1"; + sha256 = "1mzyssy2a89grw7rwmh0x22lql377nmnqlcv9piam1c32qiwxlg9"; nativeBuildInputs = [ pkg-config ]; buildInputs = [ @@ -17,5 +27,10 @@ buildPecl { pcre2 ] ++ lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.Security; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "MongoDB driver for PHP"; + license = licenses.asl20; + homepage = "https://docs.mongodb.com/drivers/php/"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/oci8/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/oci8/default.nix index eeaffb4b7f..eb65b5a27c 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/oci8/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/oci8/default.nix @@ -11,5 +11,10 @@ buildPecl { sed -i -e 's|OCISDKMANINC=`.*$|OCISDKMANINC="${oracle-instantclient.dev}/include"|' config.m4 ''; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "Extension for Oracle Database"; + license = licenses.php301; + homepage = "https://pecl.php.net/package/oci8"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/pcov/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/pcov/default.nix index 0583f776e5..f0e3e75c71 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/pcov/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/pcov/default.nix @@ -3,10 +3,15 @@ buildPecl { pname = "pcov"; - version = "1.0.8"; - sha256 = "sha256-6rbniyxLIHPW/e+eWZN1qS8F1rOB7ld1N8JKUS1geRQ="; + version = "1.0.9"; + sha256 = "0q2ig5lxzpwz3qgr05wcyh5jzhfxlygkv6nj6jagkhiialng2710"; buildInputs = [ pcre2 ]; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "A self contained php-code-coverage compatible driver for PHP."; + license = licenses.php301; + homepage = "https://github.com/krakjoe/pcov"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/pdlib/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/pdlib/default.nix index e217edd29e..5a1e431d52 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/pdlib/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/pdlib/default.nix @@ -19,6 +19,7 @@ buildPecl { meta = with lib; { description = "A PHP extension for Dlib"; license = with licenses; [ mit ]; + homepage = "https://github.com/goodspb/pdlib"; maintainers = lib.teams.php.members; }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/pdo_sqlsrv/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/pdo_sqlsrv/default.nix index d80944ada0..ab7e6e71fe 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/pdo_sqlsrv/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/pdo_sqlsrv/default.nix @@ -10,5 +10,10 @@ buildPecl { buildInputs = [ unixODBC ] ++ lib.optionals stdenv.isDarwin [ libiconv ]; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "Microsoft Drivers for PHP for SQL Server"; + license = licenses.mit; + homepage = "https://github.com/Microsoft/msphpsql"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/php-cs-fixer/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/php-cs-fixer/default.nix index c2e6a1292c..0c76ff56a6 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/php-cs-fixer/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/php-cs-fixer/default.nix @@ -1,14 +1,14 @@ { mkDerivation, fetchurl, makeWrapper, lib, php }: let pname = "php-cs-fixer"; - version = "2.18.4"; + version = "3.0.0"; in mkDerivation { inherit pname version; src = fetchurl { url = "https://github.com/FriendsOfPHP/PHP-CS-Fixer/releases/download/v${version}/php-cs-fixer.phar"; - sha256 = "sha256-ZgnWv7Xd+0XgZ/IPdjVpAEraNNJq2KHB3aUUIG1SirU="; + sha256 = "141rkcr0wbsqnc4s5vg4bk4dmxwigwxa3j0vi5c42b5k1lq3sgwr"; }; phases = [ "installPhase" ]; diff --git a/third_party/nixpkgs/pkgs/development/php-packages/php_excel/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/php_excel/default.nix index 4effddaed4..0930926a06 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/php_excel/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/php_excel/default.nix @@ -20,6 +20,11 @@ buildPecl { "--with-libxl-libdir=${libxl}/lib" ]; - meta.broken = lib.versionAtLeast php.version "8.0"; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "PHP Extension interface to the Excel writing/reading library"; + license = licenses.php301; + homepage = "https://github.com/iliaal/php_excel"; + maintainers = lib.teams.php.members; + broken = lib.versionAtLeast php.version "8.0"; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/phpmd/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/phpmd/default.nix index fde674701e..bf6979f88e 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/phpmd/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/phpmd/default.nix @@ -2,8 +2,6 @@ let pname = "phpmd"; version = "2.8.2"; - - isPhp74 = lib.versionAtLeast php.version "7.4"; in mkDerivation { inherit pname version; @@ -28,6 +26,6 @@ mkDerivation { license = licenses.bsd3; homepage = "https://phpmd.org/"; maintainers = teams.php.members; - broken = !isPhp74; + broken = versionAtLeast php.version "7.4"; }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/phpstan/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/phpstan/default.nix index 902529806a..048ae71ff2 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/phpstan/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/phpstan/default.nix @@ -1,14 +1,14 @@ { mkDerivation, fetchurl, makeWrapper, lib, php }: let pname = "phpstan"; - version = "0.12.82"; + version = "0.12.90"; in mkDerivation { inherit pname version; src = fetchurl { url = "https://github.com/phpstan/phpstan/releases/download/${version}/phpstan.phar"; - sha256 = "sha256-fX7YK4z6xUhSJ2jTCy7bRK13TxXSn/qo7E5DeZlv2Nw="; + sha256 = "0f8858w9b421s3dfz8a56g0mik4zyi1lp88lijw4zs2d94dcdl9s"; }; phases = [ "installPhase" ]; diff --git a/third_party/nixpkgs/pkgs/development/php-packages/pinba/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/pinba/default.nix index 4c1b42183b..1649da7c65 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/pinba/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/pinba/default.nix @@ -1,14 +1,14 @@ -{ buildPecl, lib, fetchFromGitHub, php }: +{ buildPecl, lib, fetchFromGitHub }: buildPecl { pname = "pinba"; - version = "1.1.2-dev"; + version = "1.1.2"; src = fetchFromGitHub { owner = "tony2001"; repo = "pinba_extension"; - rev = "edbc313f1b4fb8407bf7d5acf63fbb0359c7fb2e"; - sha256 = "02sljqm6griw8ccqavl23f7w1hp2zflcv24lpf00k6pyrn9cwx80"; + rev = "RELEASE_1_1_2"; + sha256 = "0wqcqq6sb51wiawa37hbd1h9dbvmyyndzdvz87xqji7lpr9vn8jy"; }; meta = with lib; { @@ -17,6 +17,7 @@ buildPecl { Pinba is a MySQL storage engine that acts as a realtime monitoring and statistics server for PHP using MySQL as a read-only interface. ''; + license = licenses.lgpl2Plus; homepage = "http://pinba.org/"; maintainers = teams.php.members; }; diff --git a/third_party/nixpkgs/pkgs/development/php-packages/protobuf/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/protobuf/default.nix index 2112e84cff..87007b1ea1 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/protobuf/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/protobuf/default.nix @@ -1,30 +1,13 @@ -{ buildPecl, lib, pcre2, fetchpatch }: +{ buildPecl, lib, pcre2 }: buildPecl { pname = "protobuf"; - version = "3.14.0"; - sha256 = "1ldc4s28hq61cfg8l4c06pgicj0ng7k37f28a0dnnbs7xkr7cibd"; + version = "3.17.3"; + sha256 = "05nn6ps271vwrbr9w08lyyzsszabnqhz1x0vbblg0q8y2xrmb6dl"; buildInputs = [ pcre2 ]; - patches = [ - # TODO: remove with next update - (fetchpatch { - url = "https://github.com/protocolbuffers/protobuf/commit/823f351448f7c432bed40b89ee3309e0a94c1855.patch"; - sha256 = "sha256-ozHtO8s9zvmh/+wBEge3Yn3n0pbpR3dAojJcuAg/G3s="; - stripLen = 4; - includes = [ - "array.c" - "def.c" - "map.c" - "message.c" - "protobuf.h" - "wkt.inc" - ]; - }) - ]; - meta = with lib; { description = '' Google's language-neutral, platform-neutral, extensible mechanism for serializing structured data. diff --git a/third_party/nixpkgs/pkgs/development/php-packages/psalm/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/psalm/default.nix index 01160fc35f..b5c5550806 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/psalm/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/psalm/default.nix @@ -1,14 +1,14 @@ { mkDerivation, fetchurl, makeWrapper, lib, php }: let pname = "psalm"; - version = "4.6.1"; + version = "4.7.3"; in mkDerivation { inherit pname version; src = fetchurl { url = "https://github.com/vimeo/psalm/releases/download/${version}/psalm.phar"; - sha256 = "sha256-YFeTSIfZ2u1KmpoKV5I7pMMvCk3u5ILktsunvoDnBsg="; + sha256 = "0d8gxkpm4rc00a8br5wzjpglkwx95kr15s4z3cvxyf6iik1j5r47"; }; phases = [ "installPhase" ]; diff --git a/third_party/nixpkgs/pkgs/development/php-packages/rdkafka/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/rdkafka/default.nix index c8dea9463d..1b963a01ad 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/rdkafka/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/rdkafka/default.nix @@ -15,6 +15,7 @@ buildPecl { meta = with lib; { description = "Kafka client based on librdkafka"; + license = licenses.mit; homepage = "https://github.com/arnaud-lb/php-rdkafka"; maintainers = teams.php.members; }; diff --git a/third_party/nixpkgs/pkgs/development/php-packages/redis/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/redis/default.nix index fedc7a7ffd..56e8a0a1fa 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/redis/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/redis/default.nix @@ -3,8 +3,8 @@ buildPecl { pname = "redis"; - version = "5.3.3"; - sha256 = "sha256-N3iRYeFkzVIjmjDJojjaYf7FyDlc2sOFtu2PDFD9kvA="; + version = "5.3.4"; + sha256 = "1k5l7xxb06rlwq9jbmbbr03pc74d75vgv7h5bqjkbwan6dphafab"; internalDeps = with php.extensions; [ session @@ -14,5 +14,10 @@ buildPecl { hash ]; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "PHP extension for interfacing with Redis"; + license = licenses.php301; + homepage = "https://github.com/phpredis/phpredis/"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/smbclient/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/smbclient/default.nix index 0b485e0480..65cfad9ea3 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/smbclient/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/smbclient/default.nix @@ -10,5 +10,10 @@ buildPecl { nativeBuildInputs = [ pkg-config ]; buildInputs = [ samba ]; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "PHP wrapper for libsmbclient"; + license = licenses.bsd2; + homepage = "https://github.com/eduardok/libsmbclient-php"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/sqlsrv/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/sqlsrv/default.nix index 4522129b2a..37ff1cb187 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/sqlsrv/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/sqlsrv/default.nix @@ -10,5 +10,10 @@ buildPecl { unixODBC ] ++ lib.optionals stdenv.isDarwin [ libiconv ]; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "Microsoft Drivers for PHP for SQL Server"; + license = licenses.mit; + homepage = "https://github.com/Microsoft/msphpsql"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/swoole/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/swoole/default.nix index ef228c2ddc..c9ec1b3938 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/swoole/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/swoole/default.nix @@ -3,8 +3,8 @@ buildPecl { pname = "swoole"; - version = "4.6.4"; - sha256 = "0hgndnn27q7fbsb0nw6bfdg0kyy5di9vrmf7g53jc6lsnf73ha31"; + version = "4.6.7"; + sha256 = "107wp403z8skkqrcm240vyyy6wqx5a4v2bqhlshlknyi14r2v165"; buildInputs = [ valgrind pcre2 ]; internalDeps = lib.optionals (lib.versionOlder php.version "7.4") [ php.extensions.hash ]; diff --git a/third_party/nixpkgs/pkgs/development/php-packages/xdebug/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/xdebug/default.nix index 56341be436..43387380dd 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/xdebug/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/xdebug/default.nix @@ -3,13 +3,18 @@ buildPecl { pname = "xdebug"; - version = "3.0.3"; - sha256 = "sha256-5yZagVGOOX+XLcki50bRpIRTcXf/SJVDUWfRCeKTJDI="; + version = "3.0.4"; + sha256 = "1bvjmnx9bcfq4ikp02kiqg0f7ccgx4mkmz5d7g6v0d263x4r0wmj"; doCheck = true; checkTarget = "test"; zendExtension = true; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "Provides functions for function traces and profiling"; + license = licenses.php301; + homepage = "https://xdebug.org/"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/php-packages/yaml/default.nix b/third_party/nixpkgs/pkgs/development/php-packages/yaml/default.nix index 9bd30ff4e3..ef58b315fa 100644 --- a/third_party/nixpkgs/pkgs/development/php-packages/yaml/default.nix +++ b/third_party/nixpkgs/pkgs/development/php-packages/yaml/default.nix @@ -10,5 +10,10 @@ buildPecl { nativeBuildInputs = [ pkg-config ]; - meta.maintainers = lib.teams.php.members; + meta = with lib; { + description = "YAML-1.1 parser and emitter"; + license = licenses.mit; + homepage = "http://bd808.com/pecl-file_formats-yaml/"; + maintainers = teams.php.members; + }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/Babel/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/Babel/default.nix index 183478396e..3143a80076 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/Babel/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/Babel/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "Babel"; - version = "2.9.0"; + version = "2.9.1"; src = fetchPypi { inherit pname version; - sha256 = "018yg7g2pa6vjixx1nx41cfispgfi0azzp0a1chlycbj8jsil0ys"; + sha256 = "bc0c176f9f6a994582230df350aa6e05ba2ebe4b3ac317eab29d9be5d2768da0"; }; propagatedBuildInputs = [ pytz ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/GitPython/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/GitPython/default.nix index 547be5dc4d..eda574e69c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/GitPython/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/GitPython/default.nix @@ -6,16 +6,18 @@ , git , gitdb , ddt +, pythonOlder +, typing-extensions }: buildPythonPackage rec { pname = "GitPython"; - version = "3.1.14"; + version = "3.1.18"; disabled = isPy27; # no longer supported src = fetchPypi { inherit pname version; - sha256 = "be27633e7509e58391f10207cd32b2a6cf5b908f92d9cd30da2e514e1137af61"; + sha256 = "b838a895977b45ab6f0cc926a9045c8d1c44e2b653c1fcc39fe91f42c6e8f05b"; }; patches = [ @@ -25,7 +27,12 @@ buildPythonPackage rec { }) ]; - propagatedBuildInputs = [ gitdb ddt ]; + propagatedBuildInputs = [ + gitdb + ddt + ] ++ lib.optionals (pythonOlder "3.8") [ + typing-extensions + ]; # Tests require a git repo doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/JPype1/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/JPype1/default.nix index d7c199f714..af435c5f08 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/JPype1/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/JPype1/default.nix @@ -9,12 +9,12 @@ buildPythonPackage rec { pname = "JPype1"; - version = "1.2.1"; + version = "1.3.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "f210646127d24be73cfc6d807e2cda1c6b2ab39b7a293008e8b46367af6f2204"; + sha256 = "4fc27dba89750cb0c9d692466341ce60c0fe86a16051091cb5347a37cf884151"; }; propagatedBuildInputs = lib.optionals (pythonOlder "3.8") [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/Pygments/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/Pygments/default.nix index 1f4795ac38..640c95bfcf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/Pygments/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/Pygments/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "Pygments"; - version = "2.8.1"; + version = "2.9.0"; src = fetchPypi { inherit pname version; - sha256 = "153zyxigm879sk2n71lfv03y2pgxb7dl0dlsbwkz9aydxnkf2mi6"; + sha256 = "a18f47b506a429f6f4b9df81bb02beab9ca21d0a5fee38ed15aef65f0545519f"; }; propagatedBuildInputs = [ docutils ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/abodepy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/abodepy/default.nix index e6ad75eb38..47fc6148ed 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/abodepy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/abodepy/default.nix @@ -3,7 +3,7 @@ buildPythonPackage rec { pname = "abodepy"; - version = "1.2.1"; + version = "1.2.2"; disabled = !isPy3k; @@ -11,7 +11,7 @@ buildPythonPackage rec { owner = "MisterWil"; repo = pname; rev = "v${version}"; - sha256 = "0n8gczsml6y6anin1zi8j33sjk1bv9ka02zxpksn2fi1v1h0smap"; + sha256 = "sha256-GrvNCgWGGBbUUONwS18csh4/A0MMkSk5Z6LlDhlQqok="; }; propagatedBuildInputs = [ colorlog lomond requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/absl-py/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/absl-py/default.nix index ddb6ae1c2e..8ad21f54bb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/absl-py/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/absl-py/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "absl-py"; - version = "0.12.0"; + version = "0.13.0"; src = fetchPypi { inherit pname version; - sha256 = "b44f68984a5ceb2607d135a615999b93924c771238a63920d17d3387b0d229d5"; + sha256 = "6953272383486044699fd0e9f00aad167a27e08ce19aae66c6c4b10e7e767793"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/acoustics/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/acoustics/default.nix index b652c28c62..9047910a21 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/acoustics/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/acoustics/default.nix @@ -14,6 +14,10 @@ buildPythonPackage rec { }; checkPhase = '' + export HOME=$TMPDIR + mkdir -p $HOME/.matplotlib + echo "backend: ps" > $HOME/.matplotlib/matplotlibrc + pushd tests py.test -Wignore::DeprecationWarning ./. popd diff --git a/third_party/nixpkgs/pkgs/development/python-modules/adafruit-platformdetect/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/adafruit-platformdetect/default.nix index 21579406c5..adb72d0cd0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/adafruit-platformdetect/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/adafruit-platformdetect/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "adafruit-platformdetect"; - version = "3.13.3"; + version = "3.14.0"; src = fetchPypi { pname = "Adafruit-PlatformDetect"; inherit version; - sha256 = "sha256-tA3UafaFvUH6Ko0OAXhh8Jz+ht+seTuhPjBsHHaI6rE="; + sha256 = "1v33546cflsbm6k8mhmi1r5c8fqjlirvzmf62a604xns8wrxb88h"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/adal/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/adal/default.nix index fab4c0839e..31e0e73016 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/adal/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/adal/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "adal"; - version = "1.2.6"; + version = "1.2.7"; src = fetchPypi { inherit pname version; - sha256 = "08b94d30676ceb78df31bce9dd0f05f1bc2b6172e44c437cbf5b968a00ac6489"; + sha256 = "d74f45b81317454d96e982fd1c50e6fb5c99ac2223728aea8764433a39f566f1"; }; propagatedBuildInputs = [ requests pyjwt dateutil ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/adb-shell/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/adb-shell/default.nix index 24ee4ee7ea..22e4a67ff2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/adb-shell/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/adb-shell/default.nix @@ -14,7 +14,7 @@ buildPythonPackage rec { pname = "adb-shell"; - version = "0.3.3"; + version = "0.3.4"; disabled = !isPy3k; @@ -23,7 +23,7 @@ buildPythonPackage rec { owner = "JeffLIrion"; repo = "adb_shell"; rev = "v${version}"; - sha256 = "sha256-QVSPQk/QNnIjTgKGuIg0e58qCH91wn7e4TwgWSmOJEk="; + sha256 = "sha256-H1GVbMeaVUZh8T1jgZP2o+emEkK4fOi5k4aL9ayVesA="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/adblock/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/adblock/default.nix index 59d1f2e4e7..2763684c0d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/adblock/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/adblock/default.nix @@ -3,7 +3,6 @@ , fetchFromGitHub , buildPythonPackage , rustPlatform -, pythonImportsCheckHook , pkg-config , openssl , publicsuffix-list @@ -11,11 +10,13 @@ , libiconv , CoreFoundation , Security +, pytestCheckHook +, toml }: buildPythonPackage rec { pname = "adblock"; - version = "0.4.0"; + version = "0.5.0"; disabled = isPy27; # Pypi only has binary releases @@ -23,18 +24,18 @@ buildPythonPackage rec { owner = "ArniDagur"; repo = "python-adblock"; rev = version; - sha256 = "10d6ks2fyzbizq3kb69q478idj0h86k6ygjb6wl3zq3mf65ma4zg"; + sha256 = "sha256-JjmMfL24778T6LCuElXsD7cJxQ+RkqbNEnEqwoN24WE="; }; cargoDeps = rustPlatform.fetchCargoTarball { inherit src; name = "${pname}-${version}"; - hash = "sha256-gEFmj3/KvhvvsOK2nX2L1RUD4Wfp3nYzEzVnQZIsIDY="; + hash = "sha256-w+/W4T3ukRHNpCPjhlHZLPn6sgCpz4QHVD8VW+Rw5BI="; }; format = "pyproject"; - nativeBuildInputs = [ pkg-config pythonImportsCheckHook ] + nativeBuildInputs = [ pkg-config ] ++ (with rustPlatform; [ cargoSetupHook maturinBuildHook ]); buildInputs = [ openssl ] @@ -42,10 +43,19 @@ buildPythonPackage rec { PSL_PATH = "${publicsuffix-list}/share/publicsuffix/public_suffix_list.dat"; - # There are no rust tests - doCheck = false; + checkInputs = [ pytestCheckHook toml ]; - pythonImportsCheck = [ "adblock" ]; + preCheck = '' + # import from $out instead + rm -r adblock + ''; + + disabledTestPaths = [ + # relies on directory removed above + "tests/test_typestubs.py" + ]; + + pythonImportsCheck = [ "adblock" "adblock.adblock" ]; meta = with lib; { description = "Python wrapper for Brave's adblocking library, which is written in Rust"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aemet-opendata/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aemet-opendata/default.nix new file mode 100644 index 0000000000..9c344f720a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/aemet-opendata/default.nix @@ -0,0 +1,40 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, geopy +, requests +, urllib3 +}: + +buildPythonPackage rec { + pname = "aemet-opendata"; + version = "0.2.1"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "Noltari"; + repo = "AEMET-OpenData"; + rev = version; + sha256 = "0jl1897m3qmr48n469mq7d66k1j0rn7hlbcahm0ylf5i3ma03aiw"; + }; + + propagatedBuildInputs = [ + geopy + requests + urllib3 + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "aemet_opendata.interface" ]; + + meta = with lib; { + description = "Python client for AEMET OpenData Rest API"; + homepage = "https://github.com/Noltari/AEMET-OpenData"; + license = licenses.gpl2Only; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ailment/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ailment/default.nix index de1a749bc3..388880cda0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ailment/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ailment/default.nix @@ -7,14 +7,14 @@ buildPythonPackage rec { pname = "ailment"; - version = "9.0.7833"; + version = "9.0.8021"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "angr"; repo = pname; rev = "v${version}"; - sha256 = "sha256-GUy1wETKV9Y9RYwJZqV22a0GrWkVRJRuFv/ADzPCzPg="; + sha256 = "sha256-DeQvYuVRYOxyVPqHzTSNtEUUN4tHhSVMZoex6SUWik8="; }; propagatedBuildInputs = [ pyvex ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-client/default.nix new file mode 100644 index 0000000000..f347ed5cd1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-client/default.nix @@ -0,0 +1,45 @@ +{ lib +, aiohttp +, aresponses +, asynctest +, buildPythonPackage +, fetchFromGitHub +, geojson +, haversine +, pytest-asyncio +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "aio-geojson-client"; + version = "0.15"; + + src = fetchFromGitHub { + owner = "exxamalte"; + repo = "python-aio-geojson-client"; + rev = "v${version}"; + sha256 = "0sbzrzmny7x4bkbg6z0cjn4d10r50nxdyaq7g6lagwd8ijpkg8l3"; + }; + + propagatedBuildInputs = [ + aiohttp + geojson + haversine + ]; + + checkInputs = [ + aresponses + asynctest + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "aio_geojson_client" ]; + + meta = with lib; { + description = "Python module for accessing GeoJSON feeds"; + homepage = "https://github.com/exxamalte/python-aio-geojson-client"; + license = with licenses; [ asl20 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-geonetnz-quakes/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-geonetnz-quakes/default.nix new file mode 100644 index 0000000000..b42ba55bfa --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-geonetnz-quakes/default.nix @@ -0,0 +1,43 @@ +{ lib +, aio-geojson-client +, aiohttp +, aresponses +, buildPythonPackage +, fetchFromGitHub +, pytest-asyncio +, pytestCheckHook +, pytz +}: + +buildPythonPackage rec { + pname = "aio-geojson-geonetnz-quakes"; + version = "0.13"; + + src = fetchFromGitHub { + owner = "exxamalte"; + repo = "python-aio-geojson-geonetnz-quakes"; + rev = "v${version}"; + sha256 = "sha256-M1QleYVPqLFjxBmOlNJdydxDTk0JJf+GYVtOTC3YUTA="; + }; + + propagatedBuildInputs = [ + aio-geojson-client + aiohttp + pytz + ]; + + checkInputs = [ + aresponses + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "aio_geojson_geonetnz_quakes" ]; + + meta = with lib; { + description = "Python module for accessing the GeoNet NZ Quakes GeoJSON feeds"; + homepage = "https://github.com/exxamalte/pythonaio-geojson-geonetnz-quakes"; + license = with licenses; [ asl20 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-geonetnz-volcano/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-geonetnz-volcano/default.nix new file mode 100644 index 0000000000..3cc46ae3af --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-geonetnz-volcano/default.nix @@ -0,0 +1,45 @@ +{ lib +, aio-geojson-client +, aiohttp +, aresponses +, asynctest +, buildPythonPackage +, fetchFromGitHub +, pytest-asyncio +, pytestCheckHook +, pytz +}: + +buildPythonPackage rec { + pname = "aio-geojson-geonetnz-volcano"; + version = "0.6"; + + src = fetchFromGitHub { + owner = "exxamalte"; + repo = "python-aio-geojson-geonetnz-volcano"; + rev = "v${version}"; + sha256 = "0n97kij2fprzajh57sy1z57kaqiil7pd5y67lq2hqm2cnvkar5ci"; + }; + + propagatedBuildInputs = [ + aio-geojson-client + aiohttp + pytz + ]; + + checkInputs = [ + aresponses + asynctest + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "aio_geojson_geonetnz_volcano" ]; + + meta = with lib; { + description = "Python module for accessing the GeoNet NZ Volcanic GeoJSON feeds"; + homepage = "https://github.com/exxamalte/pythonaio-geojson-geonetnz-volcano"; + license = with licenses; [ asl20 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-nsw-rfs-incidents/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-nsw-rfs-incidents/default.nix new file mode 100644 index 0000000000..792f91bc7f --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/aio-geojson-nsw-rfs-incidents/default.nix @@ -0,0 +1,45 @@ +{ lib +, aio-geojson-client +, aiohttp +, aresponses +, asynctest +, buildPythonPackage +, fetchFromGitHub +, pytest-asyncio +, pytestCheckHook +, pytz +}: + +buildPythonPackage rec { + pname = "aio-geojson-nsw-rfs-incidents"; + version = "0.4"; + + src = fetchFromGitHub { + owner = "exxamalte"; + repo = "python-aio-geojson-nsw-rfs-incidents"; + rev = "v${version}"; + sha256 = "sha256-o9tuoJ7VZ6bg0rYeRWClKxdbxxj6wPgkSF7ZdOfmJew="; + }; + + propagatedBuildInputs = [ + aio-geojson-client + aiohttp + pytz + ]; + + checkInputs = [ + aresponses + asynctest + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "aio_geojson_nsw_rfs_incidents" ]; + + meta = with lib; { + description = "Python module for accessing the NSW Rural Fire Service incidents feeds"; + homepage = "https://github.com/exxamalte/python-aio-geojson-nsw-rfs-incidents"; + license = with licenses; [ asl20 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aio-georss-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aio-georss-client/default.nix index 1ac37e8b60..2b40028721 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aio-georss-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aio-georss-client/default.nix @@ -15,14 +15,14 @@ buildPythonPackage rec { pname = "aio-georss-client"; - version = "0.7"; + version = "0.8"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "exxamalte"; repo = "python-aio-georss-client"; rev = "v${version}"; - sha256 = "1nhw2sf92dbizxdcil1wdmbaa3hbmsiriy8jfzpqxsliw5dc0kmh"; + sha256 = "0447scp5n906p8kfzy0lwdq06f6hkq71r2zala6g3vr6b3kla6h8"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aio-georss-gdacs/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aio-georss-gdacs/default.nix index 75894aa0e7..6b6d295f8b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aio-georss-gdacs/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aio-georss-gdacs/default.nix @@ -11,14 +11,14 @@ buildPythonPackage rec { pname = "aio-georss-gdacs"; - version = "0.4"; + version = "0.5"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "exxamalte"; repo = "python-aio-georss-gdacs"; rev = "v${version}"; - sha256 = "0rcrhdpgj84hfifx9rzxz15ajzsk069iknb28gicw1cm1qv4vfxm"; + sha256 = "sha256-CIQoQRk5KIPEa/Y/7C1NPctuHvoiZ/o2bDa5YSWY+9M="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aioazuredevops/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aioazuredevops/default.nix new file mode 100644 index 0000000000..3568e98a59 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/aioazuredevops/default.nix @@ -0,0 +1,40 @@ +{ lib +, buildPythonPackage +, isPy27 +, fetchPypi +, aiohttp +, click +}: + +buildPythonPackage rec { + pname = "aioazuredevops"; + version = "1.3.5"; + + disabled = isPy27; + + src = fetchPypi { + inherit pname version; + sha256 = "4c98a995d0516f502ba191fa3ac973ee72b93425e7eab3cdf770516c6e93c780"; + }; + + propagatedBuildInputs = [ + aiohttp + click + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ + "aioazuredevops.builds" + "aioazuredevops.client" + "aioazuredevops.core" + ]; + + meta = with lib; { + description = "Get data from the Azure DevOps API"; + homepage = "https://github.com/timmo001/aioazuredevops"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiobotocore/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiobotocore/default.nix index 1ebf66a259..e07b56d3f2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiobotocore/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiobotocore/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "aiobotocore"; - version = "1.3.0"; + version = "1.3.1"; disabled = pythonOlder "3.7"; src = fetchPypi { inherit pname version; - sha256 = "17pcdi69bwdfw2wv3a0fhira5gimw88sp2wf47yqz50z1ckhv2c1"; + sha256 = "8ecee55346651e0f4cbda883e3e16cfe11460b8d7adcc08d0017cbb867636ae1"; }; # relax version constraints: aiobotocore works with newer botocore versions diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aioesphomeapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aioesphomeapi/default.nix index 795657262f..896b9c71a7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aioesphomeapi/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aioesphomeapi/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "aioesphomeapi"; - version = "2.8.0"; + version = "2.9.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "1j25i7vh4fg56rzhzxlaj4ys1rvswld15ia44mwwzxfggw8w3rbk"; + sha256 = "11259cd1f115d31b91512a209779fa813dded747408100805bc8ecf7c1c1fa82"; }; propagatedBuildInputs = [ attrs protobuf zeroconf ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiofiles/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiofiles/default.nix index fd77a55878..ffa176edc8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiofiles/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiofiles/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "aiofiles"; - version = "0.6.0"; + version = "0.7.0"; src = fetchPypi { inherit pname version; - sha256 = "e0281b157d3d5d59d803e3f4557dcc9a3dff28a4dd4829a9ff478adae50ca092"; + sha256 = "a1c4fc9b2ff81568c83e21392a82f344ea9d23da906e4f6a52662764545e19d4"; }; disabled = pythonOlder "3.3"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aioguardian/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aioguardian/default.nix index 47b8201618..74ff8fb3fd 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aioguardian/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aioguardian/default.nix @@ -5,7 +5,7 @@ , asynctest , buildPythonPackage , fetchFromGitHub -, poetry +, poetry-core , pytest-aiohttp , pytest-asyncio , pytestCheckHook @@ -16,7 +16,6 @@ buildPythonPackage rec { pname = "aioguardian"; version = "1.0.7"; - disabled = pythonAtLeast "3.9"; src = fetchFromGitHub { owner = "bachya"; @@ -27,7 +26,9 @@ buildPythonPackage rec { format = "pyproject"; - nativeBuildInputs = [ poetry ]; + nativeBuildInputs = [ + poetry-core + ]; propagatedBuildInputs = [ aiohttp @@ -44,8 +45,17 @@ buildPythonPackage rec { pytestCheckHook ]; - # Ignore the examples as they are prefixed with test_ - pytestFlagsArray = [ "--ignore examples/" ]; + postPatch = '' + # https://github.com/bachya/aioguardian/pull/66 + substituteInPlace pyproject.toml \ + --replace 'asyncio_dgram = "^1.0.1"' 'asyncio_dgram = "^2.0.0"' + # https://github.com/bachya/aioguardian/pull/67 + substituteInPlace pyproject.toml \ + --replace "poetry>=0.12" "poetry-core" + ''; + + disabledTestPaths = [ "examples/" ]; + pythonImportsCheck = [ "aioguardian" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiohomekit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiohomekit/default.nix index 2d76d03323..f1c018989c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiohomekit/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiohomekit/default.nix @@ -2,7 +2,7 @@ , buildPythonPackage , cryptography , fetchFromGitHub -, poetry +, poetry-core , pytest-aiohttp , pytestCheckHook , pythonAtLeast @@ -11,18 +11,19 @@ buildPythonPackage rec { pname = "aiohomekit"; - version = "0.2.62"; + version = "0.3.0"; format = "pyproject"; - disabled = pythonAtLeast "3.9"; src = fetchFromGitHub { owner = "Jc2k"; repo = pname; rev = version; - sha256 = "sha256-01IzeR0iukPTkz8I7h93wZkgjz6flRAJN8unEX6d+cs="; + sha256 = "sha256-chRUQyCDXW4of0XBdmKuQEzUE3Gt4A2uGlPNy+oEoco="; }; - nativeBuildInputs = [ poetry ]; + nativeBuildInputs = [ + poetry-core + ]; propagatedBuildInputs = [ cryptography @@ -34,11 +35,9 @@ buildPythonPackage rec { pytestCheckHook ]; - # Some test requires network access - disabledTests = [ - "test_remove_pairing" - "test_pair" - "test_add_and_remove_pairings" + disabledTestPaths = [ + # Tests require network access + "tests/test_ip_pairing.py" ]; pythonImportsCheck = [ "aiohomekit" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiohttp/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiohttp/default.nix index c0722c8c97..d6203c1ebe 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiohttp/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiohttp/default.nix @@ -15,7 +15,6 @@ , freezegun , gunicorn , pytest-mock -, pytest-xdist , pytestCheckHook , re-assert , trustme @@ -52,16 +51,11 @@ buildPythonPackage rec { freezegun gunicorn pytest-mock - pytest-xdist pytestCheckHook re-assert trustme ]; - pytestFlagsArray = [ - "-n auto" - ]; - disabledTests = [ # Disable tests that require network access "test_mark_formdata_as_processed" diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiohue/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiohue/default.nix index 65baaec371..990228039d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiohue/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiohue/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "aiohue"; - version = "2.3.1"; + version = "2.5.1"; src = fetchPypi { inherit pname version; - sha256 = "1qxvqqsflcn263yg7r8vvfc2c2fl3rh4dkzwzh926ijnbc2sk4nm"; + sha256 = "3ee8e857b07364516f8b9f0e5c52d4cd775036f3ace37c2769de1e8579f4dc07"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiolyric/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiolyric/default.nix index 0dc576fca4..4c20e38d8c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiolyric/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiolyric/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "aiolyric"; - version = "1.0.6"; + version = "1.0.7"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "timmo001"; repo = pname; rev = "v${version}"; - sha256 = "1lnzsdw6kvgk0762f3vyw4xfzn7qkvsff16q61gm0ryjqg9j8whx"; + sha256 = "sha256-3UyWUsamluJclwrQD+MuUPLhNJoNU4/8w1m92OLWyrg="; }; propagatedBuildInputs = [ aiohttp ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiomodernforms/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiomodernforms/default.nix new file mode 100644 index 0000000000..ef3f86ad33 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiomodernforms/default.nix @@ -0,0 +1,43 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, aiohttp +, backoff +, yarl +, aresponses +, pytest-asyncio +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "aiomodernforms"; + version = "0.1.8"; + + src = fetchFromGitHub { + owner = "wonderslug"; + repo = "aiomodernforms"; + rev = "v${version}"; + sha256 = "sha256-Vx51WBjjNPIfLlwMnAuwHnGNljhnjKkU0tWB9M9rjsw="; + }; + + propagatedBuildInputs = [ + aiohttp + backoff + yarl + ]; + + checkInputs = [ + aresponses + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "aiomodernforms" ]; + + meta = with lib; { + description = "Asynchronous Python client for Modern Forms fans"; + homepage = "https://github.com/wonderslug/aiomodernforms"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiopvpc/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiopvpc/default.nix index 0b079e0d1a..efbe695673 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiopvpc/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiopvpc/default.nix @@ -4,6 +4,7 @@ , backports-zoneinfo , buildPythonPackage , fetchFromGitHub +, holidays , poetry-core , pytest-asyncio , pytest-timeout @@ -14,7 +15,7 @@ buildPythonPackage rec { pname = "aiopvpc"; - version = "2.1.2"; + version = "2.2.0"; disabled = pythonOlder "3.8"; format = "pyproject"; @@ -22,7 +23,7 @@ buildPythonPackage rec { owner = "azogue"; repo = pname; rev = "v${version}"; - sha256 = "0s8ki46dh39kw6qvsjcfcxa0gblyi33m3hry137kbi4lw5ws6qhr"; + sha256 = "1hk3giwzzlcqnpw9kx3zrr808nmdb7qwac60fki5395qffd2fpqw"; }; nativeBuildInputs = [ @@ -32,6 +33,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ aiohttp backports-zoneinfo + holidays tzdata async-timeout ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiorecollect/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiorecollect/default.nix index 1bce60ce6a..0d3fe5bbae 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiorecollect/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiorecollect/default.nix @@ -12,14 +12,14 @@ buildPythonPackage rec { pname = "aiorecollect"; - version = "1.0.4"; + version = "1.0.5"; format = "pyproject"; src = fetchFromGitHub { owner = "bachya"; repo = pname; rev = version; - sha256 = "sha256-A4qk7eo4maCRP4UmtWrRCPvG6YrLVSOiOcfN8pEj5Po="; + sha256 = "0h76l0pahnmls0radknzm8dw79qx9dv0xhxqnn6011j9fwyviyqm"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiosmb/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiosmb/default.nix index b9c968d63f..86686d2055 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiosmb/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiosmb/default.nix @@ -14,12 +14,12 @@ buildPythonPackage rec { pname = "aiosmb"; - version = "0.2.44"; + version = "0.2.48"; disabled = pythonOlder "3.7"; src = fetchPypi { inherit pname version; - sha256 = "sha256-xNdrOO0BqV4sD6U39G2RXihDBBf516x8RLiqNLnZyWk="; + sha256 = "f5518987e3d41d213a4ffc4dd38362465b5d2cf99417014cb5402f8ee8c5abac"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiostream/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiostream/default.nix index b51a710569..0bdab3bb28 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiostream/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiostream/default.nix @@ -9,14 +9,14 @@ buildPythonPackage rec { pname = "aiostream"; - version = "0.4.2"; + version = "0.4.3"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "vxgmichel"; repo = pname; rev = "v${version}"; - sha256 = "0ss41hzvlnyll5xc5ddxqyqqw4gnd67yyhci25xnb1vpcz0jqsq8"; + sha256 = "1r3x9qwl08yscmzvhafc6gsmq84lr17s6p7a1qxr49cmdvjzsc13"; }; checkInputs = [ pytestCheckHook pytestcov pytest-asyncio ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiosyncthing/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiosyncthing/default.nix index 553876a48c..7bbf740c78 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiosyncthing/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiosyncthing/default.nix @@ -12,13 +12,13 @@ buildPythonPackage rec { pname = "aiosyncthing"; - version = "0.5.1"; + version = "0.6.3"; src = fetchFromGitHub { owner = "zhulik"; repo = pname; rev = "v${version}"; - sha256 = "0704qbg3jy80vaw3bcvhy988s1qs3fahpfwkja71fy70bh0vc860"; + sha256 = "sha256-vn8S2/kRW5C2Hbes9oLM4LGm1jWWK0zeLdujR14y6EI="; }; propagatedBuildInputs = [ @@ -34,6 +34,11 @@ buildPythonPackage rec { pytest-mock ]; + postPatch = '' + substituteInPlace pyproject.toml \ + --replace " --cov=aiosyncthing --cov-report=html" "" + ''; + pythonImportsCheck = [ "aiosyncthing" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiotractive/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiotractive/default.nix new file mode 100644 index 0000000000..78d9ef4350 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiotractive/default.nix @@ -0,0 +1,37 @@ +{ lib +, aiohttp +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +, yarl +}: + +buildPythonPackage rec { + pname = "aiotractive"; + version = "0.5.1"; + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "zhulik"; + repo = pname; + rev = "v${version}"; + sha256 = "09zbca84dn1sprwqpfanmxxnmaknbzjz98xa87agpgy8xb3wpw7j"; + }; + + propagatedBuildInputs = [ + aiohttp + yarl + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "aiotractive" ]; + + meta = with lib; { + description = "Python client for the Tractive REST API"; + homepage = "https://github.com/zhulik/aiotractive"; + license = licenses.mit; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aiowinreg/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aiowinreg/default.nix index 3b02916d22..17d9160ce5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aiowinreg/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aiowinreg/default.nix @@ -2,19 +2,22 @@ , buildPythonPackage , fetchPypi , pythonOlder +, winacl }: buildPythonPackage rec { pname = "aiowinreg"; - version = "0.0.4"; + version = "0.0.5"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "956278a90ef6958f9e2392891b2a305273f695b15b14489cd2097197d6cbe155"; + sha256 = "096663ec3db35fdc7ccc1c2d0d64a11cf64f4baa48955088e42b6a649ce418a5"; }; + propagatedBuildInputs = [ winacl ]; + # Project doesn't have tests doCheck = false; pythonImportsCheck = [ "aiowinreg" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aladdin-connect/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aladdin-connect/default.nix new file mode 100644 index 0000000000..d25cdadc89 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/aladdin-connect/default.nix @@ -0,0 +1,33 @@ +{ lib +, requests +, buildPythonPackage +, fetchFromGitHub +}: + +buildPythonPackage rec { + pname = "aladdin-connect"; + version = "0.3"; + + src = fetchFromGitHub { + owner = "shoejosh"; + repo = pname; + rev = version; + sha256 = "0nimd1nw1haxn8s2207fcrmpjyfp6nx97n560l6hzqyqqmf2d1d1"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "aladdin_connect" ]; + + meta = with lib; { + description = "Python library for interacting with Genie Aladdin Connect devices"; + homepage = "https://github.com/shoejosh/aladdin-connect"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/alembic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/alembic/default.nix index 899bea2acb..c820ee81ee 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/alembic/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/alembic/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "alembic"; - version = "1.5.8"; + version = "1.6.5"; src = fetchPypi { inherit pname version; - sha256 = "e27fd67732c97a1c370c33169ef4578cf96436fa0e7dcfaeeef4a917d0737d56"; + sha256 = "a21fedebb3fb8f6bbbba51a11114f08c78709377051384c9c5ead5705ee93a51"; }; buildInputs = [ pytest pytestcov mock coverage ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/alpha-vantage/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/alpha-vantage/default.nix new file mode 100644 index 0000000000..7a67f9d6b0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/alpha-vantage/default.nix @@ -0,0 +1,49 @@ +{ lib +, aiohttp +, aioresponses +, buildPythonPackage +, fetchFromGitHub +, pandas +, pytestCheckHook +, requests +, requests-mock +}: + +buildPythonPackage rec { + pname = "alpha-vantage"; + version = "2.3.1"; + + src = fetchFromGitHub { + owner = "RomelTorres"; + repo = "alpha_vantage"; + rev = version; + sha256 = "0cyw6zw7c7r076rmhnmg905ihwb9r7g511n6gdlph06v74pdls8d"; + }; + + propagatedBuildInputs = [ + aiohttp + requests + ]; + + checkInputs = [ + aioresponses + requests-mock + pandas + pytestCheckHook + ]; + + disabledTestPaths = [ + # Tests require network access + "test_alpha_vantage/test_integration_alphavantage.py" + "test_alpha_vantage/test_integration_alphavantage_async.py" + ]; + + pythonImportsCheck = [ "alpha_vantage" ]; + + meta = with lib; { + description = "Python module for the Alpha Vantage API"; + homepage = "https://github.com/RomelTorres/alpha_vantage"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/amazon_kclpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/amazon_kclpy/default.nix index 44dc739f1c..b39d390274 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/amazon_kclpy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/amazon_kclpy/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "amazon_kclpy"; - version = "2.0.1"; + version = "2.0.2"; src = fetchFromGitHub { owner = "awslabs"; repo = "amazon-kinesis-client-python"; rev = "v${version}"; - sha256 = "13iq217fg0bxafp2rl684pg1rz4jbwid8cc8ip4rim07kzn65lbg"; + sha256 = "12yxcwml6g86sv1pj3wc2k97md9szdj6xx07qwri1mr9bdkzw7rv"; }; # argparse is just required for python2.6 diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ambee/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ambee/default.nix new file mode 100644 index 0000000000..2649d0fdd0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/ambee/default.nix @@ -0,0 +1,56 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, aiohttp +, poetry-core +, yarl +, aresponses +, pytest-asyncio +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "ambee"; + version = "0.3.0"; + disabled = pythonOlder "3.8"; + format = "pyproject"; + + src = fetchFromGitHub { + owner = "frenck"; + repo = "python-ambee"; + rev = "v${version}"; + sha256 = "0vivzpfsmb4gy7k5wlbk5ylkpqy4jhki9lbgxyrrqj5yhhzz6cwy"; + }; + + nativeBuildInputs = [ + poetry-core + ]; + + propagatedBuildInputs = [ + aiohttp + yarl + ]; + + checkInputs = [ + aresponses + pytest-asyncio + pytestCheckHook + ]; + + postPatch = '' + # Upstream doesn't set a version for the pyproject.toml + substituteInPlace pyproject.toml \ + --replace "0.0.0" "${version}" \ + --replace "--cov" "" + ''; + + pythonImportsCheck = [ "ambee" ]; + + meta = with lib; { + description = "Python client for Ambee API"; + homepage = "https://github.com/frenck/python-ambee"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/amqp/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/amqp/default.nix index 6e6d95ba8f..6156472896 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/amqp/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/amqp/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "amqp"; - version = "5.0.5"; + version = "5.0.6"; src = fetchPypi { inherit pname version; - sha256 = "affdd263d8b8eb3c98170b78bf83867cdb6a14901d586e00ddb65bfe2f0c4e60"; + sha256 = "03e16e94f2b34c31f8bf1206d8ddd3ccaa4c315f7f6a1879b7b1210d229568c2"; }; propagatedBuildInputs = [ vine ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/amqtt/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/amqtt/default.nix index 8ab0e7a7c0..d0cc2bd5da 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/amqtt/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/amqtt/default.nix @@ -15,7 +15,7 @@ buildPythonPackage rec { pname = "amqtt"; - version = "0.10.0-alpha.3"; + version = "0.10.0-alpha.4"; format = "pyproject"; disabled = pythonOlder "3.7"; @@ -23,7 +23,7 @@ buildPythonPackage rec { owner = "Yakifo"; repo = pname; rev = "v${version}"; - sha256 = "0wz85ykjgi2174qcdgpakmc4m0p96v62az7pvc9hyallq1v1k4n6"; + sha256 = "1v5hlcciyicnhwk1xslh3kxyjqaw526fb05pvhjpp3zqrmbxya4d"; }; nativeBuildInputs = [ poetry-core ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/androidtv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/androidtv/default.nix index 02edcea42e..e49f4ba53f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/androidtv/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/androidtv/default.nix @@ -11,14 +11,14 @@ buildPythonPackage rec { pname = "androidtv"; - version = "0.0.59"; + version = "0.0.60"; # pypi does not contain tests, using github sources instead src = fetchFromGitHub { owner = "JeffLIrion"; repo = "python-androidtv"; rev = "v${version}"; - sha256 = "sha256-QuKWOo+QMBpVJglwvaSMbKKYMN/MW31E7BgIMchESG8="; + sha256 = "sha256-GWCiRxZ6pHrcVkOKNGxSK8lUD0RohtED8czXIWUoVaM="; }; propagatedBuildInputs = [ adb-shell pure-python-adb ] diff --git a/third_party/nixpkgs/pkgs/development/python-modules/angr/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/angr/default.nix index fd3bb30d20..89cdc5c55f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/angr/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/angr/default.nix @@ -42,14 +42,14 @@ in buildPythonPackage rec { pname = "angr"; - version = "9.0.7833"; + version = "9.0.8021"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "sha256-1D1FhRhFHpQSQnMAPmp78TRIx9T5LL5MIdaYV/hPCv0="; + sha256 = "sha256-brX/HdeZSPOnZKuD1v086GwyWSV8yA/FaMC3CbeI4Xk="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/angrop/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/angrop/default.nix index 997cd6c401..09d1388c25 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/angrop/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/angrop/default.nix @@ -9,14 +9,14 @@ buildPythonPackage rec { pname = "angrop"; - version = "9.0.7833"; + version = "9.0.8021"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "angr"; repo = pname; rev = "v${version}"; - sha256 = "sha256-JhD4/P5/IhmLBvmG3XoIEYVkowK+dDoLuwOdMhGi5q8="; + sha256 = "sha256-wkCgVVHulu1hGdbUSEi38aMWy2UfR3g/7jj+o+NLI44="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ansible/base.nix b/third_party/nixpkgs/pkgs/development/python-modules/ansible/base.nix index f3470f80b5..0a5cc01d92 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ansible/base.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ansible/base.nix @@ -1,8 +1,8 @@ { lib +, callPackage , buildPythonPackage , fetchPypi , installShellFiles -, ansible-collections , cryptography , jinja2 , junit-xml @@ -20,13 +20,19 @@ , xmltodict }: +let + ansible-collections = callPackage ./collections.nix { + version = "3.4.0"; # must be < 4.0 + sha256 = "096rbgz730njk0pg8qnc27mmz110wqrw354ca9gasb7rqg0f4d6a"; + }; +in buildPythonPackage rec { pname = "ansible-base"; - version = "2.10.9"; + version = "2.10.11"; src = fetchPypi { inherit pname version; - sha256 = "0l91bwbavjnaqsnb4c6f17xl7r0cvglz3rxqfs63aagw10z5sqq4"; + sha256 = "0jr3cxqiami9k07g2kmvfp54iafbcnd1d66l8fdnaqka5bc19wdw"; }; # ansible_connection is already wrapped, so don't pass it through @@ -69,6 +75,10 @@ buildPythonPackage rec { # internal import errors, missing dependencies doCheck = false; + passthru = { + collections = ansible-collections; + }; + meta = with lib; { description = "Radically simple IT automation"; homepage = "https://www.ansible.com"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ansible/collections.nix b/third_party/nixpkgs/pkgs/development/python-modules/ansible/collections.nix index 9547b9a091..05aa0b2b29 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ansible/collections.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ansible/collections.nix @@ -14,21 +14,23 @@ , xmltodict , withJunos ? false , withNetbox ? false + +, version +, sha256 }: buildPythonPackage rec { pname = "ansible"; - version = "3.4.0"; + inherit version; format = "setuptools"; src = fetchPypi { - inherit pname version; - sha256 = "096rbgz730njk0pg8qnc27mmz110wqrw354ca9gasb7rqg0f4d6a"; + inherit pname version sha256; }; postPatch = '' # make ansible-base depend on ansible-collection, not the other way around - sed -i '/ansible-base/d' setup.py + sed -Ei '/ansible-(base|core)/d' setup.py ''; propagatedBuildInputs = lib.unique ([ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ansible/core.nix b/third_party/nixpkgs/pkgs/development/python-modules/ansible/core.nix index b300771b34..4dd606c9ad 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ansible/core.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ansible/core.nix @@ -1,8 +1,8 @@ { lib +, callPackage , buildPythonPackage , fetchPypi , installShellFiles -, ansible-collections , cryptography , jinja2 , junit-xml @@ -21,13 +21,19 @@ , xmltodict }: +let + ansible-collections = callPackage ./collections.nix { + version = "4.1.0"; + sha256 = "0rrivq1g0vizah8zmf012lzig2xxfk5x1371k16s3nn4zfkwqqgm"; + }; +in buildPythonPackage rec { pname = "ansible-core"; - version = "2.11.1"; + version = "2.11.2"; src = fetchPypi { inherit pname version; - sha256 = "sha256-fnWCepTUfRw+GTDXCPDvY3o6uaIfdXqvVd6rbp9HxoI="; + sha256 = "1syadgzn5ww5bhq9s2py4h1hkh11h7aac5b37zi8rw2xfvdc7r2s"; }; # ansible_connection is already wrapped, so don't pass it through @@ -74,6 +80,10 @@ buildPythonPackage rec { # internal import errors, missing dependencies doCheck = false; + passthru = { + collections = ansible-collections; + }; + meta = with lib; { description = "Radically simple IT automation"; homepage = "https://www.ansible.com"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ansible/legacy.nix b/third_party/nixpkgs/pkgs/development/python-modules/ansible/legacy.nix index 2779feffee..12eed6bdb2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ansible/legacy.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ansible/legacy.nix @@ -18,13 +18,13 @@ buildPythonPackage rec { pname = "ansible"; - version = "2.9.21"; + version = "2.9.23"; src = fetchFromGitHub { owner = "ansible"; repo = "ansible"; rev = "v${version}"; - sha256 = "1pfiwq2wfw11vmxdq2yhk86hm5jljlrnphlzfjr01kwzfikkdp5m"; + sha256 = "0mikykpzyqpmaiczz53f71mcyc4qvahi9ckn7wgfx7sw7s2z3skk"; }; prePatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ansicolor/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ansicolor/default.nix index 99a419a60f..07a8190727 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ansicolor/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ansicolor/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "ansicolor"; - version = "0.2.6"; + version = "0.3.2"; src = fetchPypi { inherit pname version; - sha256 = "d17e1b07b9dd7ded31699fbca53ae6cd373584f9b6dcbc124d1f321ebad31f1d"; + sha256 = "3b840a6b1184b5f1568635b1adab28147947522707d41ceba02d5ed0a0877279"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/anyascii/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/anyascii/default.nix new file mode 100644 index 0000000000..8e8b1c9207 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/anyascii/default.nix @@ -0,0 +1,29 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "anyascii"; + version = "0.2.0"; + format = "setuptools"; + disabled = pythonOlder "3.3"; + + src = fetchPypi { + inherit pname version; + sha256 = "1b6jdd9nx15py0jqjdn154m6m491517sqlk57bbyj3x4xzywadkh"; + }; + + checkInputs = [ + pytestCheckHook + ]; + + meta = with lib; { + description = "Unicode to ASCII transliteration"; + homepage = "https://github.com/anyascii/anyascii"; + license = licenses.isc; + maintainers = teams.tts.members; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/anyio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/anyio/default.nix index e6cc318248..9ac37cdc59 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/anyio/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/anyio/default.nix @@ -3,11 +3,14 @@ , buildPythonPackage , fetchFromGitHub , pythonOlder +, setuptools-scm , idna , sniffio , typing-extensions , curio , hypothesis +, mock +, pytest-mock , pytestCheckHook , trio , trustme @@ -16,7 +19,7 @@ buildPythonPackage rec { pname = "anyio"; - version = "2.2.0"; + version = "3.2.0"; format = "pyproject"; disabled = pythonOlder "3.7"; @@ -24,9 +27,17 @@ buildPythonPackage rec { owner = "agronholm"; repo = pname; rev = version; - sha256 = "0ram1niv2lg9qj53zssph104a4kxl8f94ilfn6mibn034m3ikcc8"; + sha256 = "sha256-zQiSAQN7cp1s+8hDTvYaMkHUXV1ccNwIsl2IOztH7J8="; }; + preBuild = '' + export SETUPTOOLS_SCM_PRETEND_VERSION=${version} + ''; + + nativeBuildInputs = [ + setuptools-scm + ]; + propagatedBuildInputs = [ idna sniffio @@ -37,18 +48,21 @@ buildPythonPackage rec { checkInputs = [ curio hypothesis + pytest-mock pytestCheckHook trio trustme uvloop + ] ++ lib.optionals (pythonOlder "3.8") [ + mock ]; - pytestFlagsArray = [ - # lots of DNS lookups - "--ignore=tests/test_sockets.py" + disabledTestPaths = [ + # lots of DNS lookups + "tests/test_sockets.py" ] ++ lib.optionals stdenv.isDarwin [ # darwin sandboxing limitations - "--ignore=tests/streams/test_tls.py" + "tests/streams/test_tls.py" ]; pythonImportsCheck = [ "anyio" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/apispec/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/apispec/default.nix index 1262bb3338..2db76ab248 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/apispec/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/apispec/default.nix @@ -12,12 +12,12 @@ buildPythonPackage rec { pname = "apispec"; - version = "4.4.1"; + version = "4.6.0"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-qt7UrkUXUsWLcOV5kj2Nt9rwtx9i3vjI/noqUr18BqI="; + sha256 = "a896f97394b7d046d46c65262e51e45241dd8d9d71eedebcdb2d7024b775eec4"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/applicationinsights/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/applicationinsights/default.nix index 9f77d43526..7576bcbdf1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/applicationinsights/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/applicationinsights/default.nix @@ -5,12 +5,12 @@ }: buildPythonPackage rec { - version = "0.11.9"; + version = "0.11.10"; pname = "applicationinsights"; src = fetchPypi { inherit pname version; - sha256 = "1hyjdv6xnswgqvip8y164piwfach9hjkbp7vc2qzhd7amjpim89h"; + sha256 = "0b761f3ef0680acf4731906dfc1807faa6f2a57168ae74592db0084a6099f7b3"; }; propagatedBuildInputs = [ portalocker ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aprslib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aprslib/default.nix new file mode 100644 index 0000000000..c5f4fa75a5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/aprslib/default.nix @@ -0,0 +1,32 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, mox3 +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "aprslib"; + version = "0.6.47"; + + src = fetchFromGitHub { + owner = "rossengeorgiev"; + repo = "aprs-python"; + rev = "v${version}"; + sha256 = "1569v74ym2r8vxx3dnjcs5fr7rdrfb0i9sycny5frw2zgms4ag6b"; + }; + + checkInputs = [ + mox3 + pytestCheckHook + ]; + + pythonImportsCheck = [ "aprslib" ]; + + meta = with lib; { + description = "Module for accessing APRS-IS and parsing APRS packets"; + homepage = "https://github.com/rossengeorgiev/aprs-python"; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/arcam-fmj/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/arcam-fmj/default.nix new file mode 100644 index 0000000000..4c3ff7d85a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/arcam-fmj/default.nix @@ -0,0 +1,51 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, aiohttp +, attrs +, defusedxml +, pytest-aiohttp +, pytest-mock +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "arcam-fmj"; + version = "0.7.0"; + + disabled = pythonOlder "3.8"; + + src = fetchFromGitHub { + owner = "elupus"; + repo = "arcam_fmj"; + rev = version; + sha256 = "0y4wvvbcsizjd9qz6iw4gjhq5qf0qcqs27hpx1cd90vhy6rclxm0"; + }; + + propagatedBuildInputs = [ + aiohttp + attrs + defusedxml + ]; + + checkInputs = [ + pytest-aiohttp + pytest-mock + pytestCheckHook + ]; + + pythonImportsCheck = [ + "arcam.fmj" + "arcam.fmj.client" + "arcam.fmj.state" + "arcam.fmj.utils" + ]; + + meta = with lib; { + description = "Python library for speaking to Arcam receivers"; + homepage = "https://github.com/elupus/arcam_fmj"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/archinfo/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/archinfo/default.nix index ba678975fe..96cbf539fd 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/archinfo/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/archinfo/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "archinfo"; - version = "9.0.7833"; + version = "9.0.8021"; src = fetchFromGitHub { owner = "angr"; repo = pname; rev = "v${version}"; - sha256 = "sha256-wieg38cHxliHU7esoSOl5ViiS/uR5yVJh9l3SEsb3mo="; + sha256 = "sha256-j8sPrSaKam5gv1ZlTA3fF1u3UMei9jy843O0n8Hsibc="; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/argcomplete/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/argcomplete/default.nix index f2a9db40f6..6c62fd104f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/argcomplete/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/argcomplete/default.nix @@ -7,11 +7,11 @@ }: buildPythonPackage rec { pname = "argcomplete"; - version = "1.12.2"; + version = "1.12.3"; src = fetchPypi { inherit pname version; - sha256 = "de0e1282330940d52ea92a80fea2e4b9e0da1932aaa570f84d268939d1897b04"; + sha256 = "2c7dbffd8c045ea534921e63b0be6fe65e88599990d8dc408ac8c542b72a5445"; }; doCheck = false; # meant to be ran with interactive interpreter diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aria2p/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aria2p/default.nix index 2bb950beb2..9ea4fdf64b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aria2p/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aria2p/default.nix @@ -1,6 +1,6 @@ { lib, buildPythonPackage, fetchFromGitHub, pythonOlder , aria2, poetry, pytest, pytestcov, pytest_xdist, responses -, asciimatics, loguru, requests, setuptools, websocket_client +, asciimatics, loguru, requests, setuptools, websocket-client }: buildPythonPackage rec { @@ -32,7 +32,7 @@ buildPythonPackage rec { pytest -nauto -k "not test_api and not test_cli and not test_interface" ''; - propagatedBuildInputs = [ asciimatics loguru requests setuptools websocket_client ]; + propagatedBuildInputs = [ asciimatics loguru requests setuptools websocket-client ]; meta = with lib; { homepage = "https://github.com/pawamoy/aria2p"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/arpeggio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/arpeggio/default.nix index 29c5e43810..97718a3006 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/arpeggio/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/arpeggio/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "Arpeggio"; - version = "1.10.1"; + version = "1.10.2"; src = fetchPypi { inherit pname version; - sha256 = "920d12cc762edb2eb56daae64a14c93e43dc181b481c88fc79314c0df6ee639e"; + sha256 = "bfe349f252f82f82d84cb886f1d5081d1a31451e6045275e9f90b65d0daa06f1"; }; # Shall not be needed for next release diff --git a/third_party/nixpkgs/pkgs/development/python-modules/arrow/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/arrow/default.nix index 159ef917f5..d47dd61c3d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/arrow/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/arrow/default.nix @@ -12,13 +12,13 @@ buildPythonPackage rec { pname = "arrow"; - version = "1.0.3"; + version = "1.1.0"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "399c9c8ae732270e1aa58ead835a79a40d7be8aa109c579898eb41029b5a231d"; + sha256 = "1n2vzyrirfj7fp0zn6iipm3i8bch0g4m14z02nrvlyjiyfmi7zmq"; }; postPatch = '' @@ -41,6 +41,8 @@ buildPythonPackage rec { "test_parse_tz_name_zzz" ]; + pythonImportsCheck = [ "arrow" ]; + meta = with lib; { description = "Python library for date manipulation"; homepage = "https://github.com/crsmithdev/arrow"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/asciimatics/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/asciimatics/default.nix index cbddf962bd..0d7286c171 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/asciimatics/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/asciimatics/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "asciimatics"; - version = "1.12.0"; + version = "1.13.0"; src = fetchPypi { inherit pname version; - sha256 = "4120461a3fb345638dee4fe0f8a3d3f9b6d2d2e003f95c5f914523f94463158d"; + sha256 = "a041826ec5add03fb882d8981c1debf9b9e98274f4f2d52ec21ef30de70c2c6e"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/async-lru/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/async-lru/default.nix new file mode 100644 index 0000000000..8a5694ffde --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/async-lru/default.nix @@ -0,0 +1,46 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, pytestCheckHook +, pytest-asyncio +}: + +buildPythonPackage rec { + pname = "async-lru"; + version = "unstable-2020-10-24"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "aio-libs"; + repo = "async-lru"; + rev = "ae252508f9c5aecf9c02ddeb879d06c28dbffc42"; + sha256 = "1gk5qzdvhl2j1mw7xzchbw7bcgk9mzhvqa62nwwmvlbnx88pkwnc"; + }; + + postPatch = '' + sed -i '/^addopts/d' setup.cfg + ''; + + checkInputs = [ + pytestCheckHook + pytest-asyncio + ]; + + disabledTests = [ + # https://github.com/aio-libs/async-lru/issues/341 + "test_alru_cache_deco" + "test_alru_cache_fn_called" + "test_close" + ]; + + pythonImportsCheck = [ "async_lru" ]; + + meta = with lib; { + description = "Simple lru cache for asyncio"; + homepage = "https://github.com/wikibusiness/async_lru"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/async-upnp-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/async-upnp-client/default.nix index 46084fcd8a..369288293e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/async-upnp-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/async-upnp-client/default.nix @@ -13,14 +13,14 @@ buildPythonPackage rec { pname = "async-upnp-client"; - version = "0.18.0"; - disabled = pythonOlder "3.5"; + version = "0.19.0"; + disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "StevenLooman"; repo = "async_upnp_client"; rev = version; - sha256 = "sha256-pntOy7J4dPtAS8ZzxLLV79VQ36r+0sXMImJFhDk9bQw="; + sha256 = "0xj3j54nasl59gs1k84h3fixjsaqn7whg33h6wi99l5yfbwfqv8p"; }; propagatedBuildInputs = [ @@ -36,6 +36,24 @@ buildPythonPackage rec { pytest-asyncio ]; + disabledTests = [ + # socket.gaierror: [Errno -2] Name or service not known + "test_get_local_ip" + "test_async_get_local_ip" + # OSError: [Errno 101] Network is unreachable + "test_subscribe_fail" + "test_subscribe_auto_resubscribe" + "test_subscribe_manual_resubscribe" + "test_auto_resubscribe_fail" + "test_on_notify_dlna_event" + "test_on_notify_upnp_event" + "test_unsubscribe" + "test_subscribe" + "test_subscribe_renew" + "test_start_server" + "test_init" + ]; + pythonImportsCheck = [ "async_upnp_client" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/asyncio-dgram/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/asyncio-dgram/default.nix index 2360d170f3..b5ae2b4baf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/asyncio-dgram/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/asyncio-dgram/default.nix @@ -8,13 +8,13 @@ buildPythonPackage rec { pname = "asyncio-dgram"; - version = "1.2.0"; + version = "2.0.0"; src = fetchFromGitHub { owner = "jsbronder"; repo = pname; rev = "v${version}"; - sha256 = "sha256-wgcL/BdNjzitkkaGyRUQbW1uv1enLDnHk30YHClK58o="; + sha256 = "sha256-EL3iOoCfLAtfdMI1J2XMf4izOEo9+a+0PNQs+4HuEfo="; }; # OSError: AF_UNIX path too long diff --git a/third_party/nixpkgs/pkgs/development/python-modules/asyncio_mqtt/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/asyncio_mqtt/default.nix index bb2ead70d7..522f406da4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/asyncio_mqtt/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/asyncio_mqtt/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "asyncio_mqtt"; - version = "0.8.1"; + version = "0.9.1"; src = fetchPypi { inherit pname version; - sha256 = "c1b3bea68a35c83d290a89903079ffb311106195cd56867e201633a1ee1cad0c"; + sha256 = "0550229cecde6ff1751c49dd5ea26b02bf52b7e9bbe9bf763da765f35bb281de"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/asyncpg/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/asyncpg/default.nix index 674212bf92..5525f7940c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/asyncpg/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/asyncpg/default.nix @@ -3,12 +3,12 @@ buildPythonPackage rec { pname = "asyncpg"; - version = "0.22.0"; + version = "0.23.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "348ad471d9bdd77f0609a00c860142f47c81c9123f4064d13d65c8569415d802"; + sha256 = "812dafa4c9e264d430adcc0f5899f0dc5413155a605088af696f952d72d36b5e"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/asyncssh/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/asyncssh/default.nix index f6d59c633c..f02f5291bf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/asyncssh/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/asyncssh/default.nix @@ -5,12 +5,12 @@ buildPythonPackage rec { pname = "asyncssh"; - version = "2.5.0"; + version = "2.6.0"; disabled = pythonOlder "3.4"; src = fetchPypi { inherit pname version; - sha256 = "0b65e2af73a2e39a271bd627abbe4f7e4b0345486ed403e65987d79c72fcb70b"; + sha256 = "20f0ef553a1e64a7d38db86ba3a2f3907e72f1e81f3dfec5edb191383783c7d1"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/asyncwhois/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/asyncwhois/default.nix index fe055d7f19..3dffc71a9d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/asyncwhois/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/asyncwhois/default.nix @@ -10,14 +10,14 @@ buildPythonPackage rec { pname = "asyncwhois"; - version = "0.3.1"; + version = "0.3.2"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "pogzyb"; repo = pname; rev = "v${version}"; - sha256 = "1wp6pwnc1inzzn9nhkwq9m9ab1aylw0hzq94w6p2dsm2njfqma8h"; + sha256 = "0cxmvxc82dxrg18kcc321hfmp877knl76pa6dpfhwphwfs2v02f1"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/atpublic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/atpublic/default.nix index f217339910..5f00955eef 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/atpublic/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/atpublic/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "atpublic"; - version = "2.1.3"; + version = "2.3"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "e0b274759bfbcb6eeb7c7b44a7a46391990a43ac77aa55359b075765b54d9f5d"; + sha256 = "d6b9167fc3e09a2de2d2adcfc9a1b48d84eab70753c97de3800362e1703e3367"; }; propagatedBuildInputs = lib.optionals (pythonOlder "3.8") [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/atsim_potentials/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/atsim_potentials/default.nix index 4802ea867b..b692c90097 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/atsim_potentials/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/atsim_potentials/default.nix @@ -10,12 +10,12 @@ }: buildPythonPackage rec { - version = "0.3.0"; + version = "0.4.0"; pname = "atsim.potentials"; src = fetchPypi { inherit pname version; - sha256 = "70082fc40b0ab7565a671c2d764fe3db08bc6ce45da44e1c1e8b77a65d1f7a23"; + sha256 = "0c3e4e2323e969880f17a9924642e0991be5761f50b254bcbadd046db3be6390"; }; checkInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/attrs/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/attrs/default.nix index 7513aa04f3..08730e3d68 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/attrs/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/attrs/default.nix @@ -1,27 +1,36 @@ -{ lib, stdenv, buildPythonPackage, fetchPypi, pytest, hypothesis, zope_interface -, pympler, coverage, six, clang }: +{ lib +, callPackage +, buildPythonPackage +, fetchPypi +}: buildPythonPackage rec { pname = "attrs"; - version = "20.3.0"; + version = "21.2.0"; src = fetchPypi { inherit pname version; - sha256 = "832aa3cde19744e49938b91fea06d69ecb9e649c93ba974535d08ad92164f700"; + sha256 = "ef6aaac3ca6cd92904cdd0d83f629a15f18053ec84e6432106f7a4d04ae4f5fb"; }; - # macOS needs clang for testing - checkInputs = [ - pytest hypothesis zope_interface pympler coverage six - ] ++ lib.optionals (stdenv.isDarwin) [ clang ]; + outputs = [ "out" "testout" ]; - checkPhase = '' - py.test + postInstall = '' + # Install tests as the tests output. + mkdir $testout + cp -R tests $testout/tests ''; - # To prevent infinite recursion with pytest + pythonImportsCheck = [ "attr" ]; + + # pytest depends on attrs, so we can't do this out-of-the-box. + # Instead, we do this as a passthru.tests test. doCheck = false; + passthru.tests = { + pytest = callPackage ./tests.nix { }; + }; + meta = with lib; { description = "Python attributes without boilerplate"; homepage = "https://github.com/hynek/attrs"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/attrs/tests.nix b/third_party/nixpkgs/pkgs/development/python-modules/attrs/tests.nix new file mode 100644 index 0000000000..c9fae9e022 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/attrs/tests.nix @@ -0,0 +1,21 @@ +{ buildPythonPackage +, pytestCheckHook +, attrs +, hypothesis +}: + +buildPythonPackage { + pname = "attrs-tests"; + inherit (attrs) version; + + srcs = attrs.testout; + + dontBuild = true; + dontInstall = true; + + checkInputs = [ + attrs + hypothesis + pytestCheckHook + ]; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/audioread/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/audioread/default.nix index a4f6d90576..d2964accc1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/audioread/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/audioread/default.nix @@ -1,7 +1,6 @@ { lib , buildPythonPackage , fetchPypi -, pytestrunner }: buildPythonPackage rec { @@ -13,8 +12,6 @@ buildPythonPackage rec { sha256 = "a3480e42056c8e80a8192a54f6729a280ef66d27782ee11cbd63e9d4d1523089"; }; - nativeBuildInputs = [ pytestrunner ]; - # No tests, need to disable or py3k breaks doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/auth0-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/auth0-python/default.nix index 79844afe31..67701afc0e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/auth0-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/auth0-python/default.nix @@ -1,43 +1,43 @@ { lib , buildPythonPackage , fetchPypi -, requests , mock +, pyjwt , pytestCheckHook +, requests }: buildPythonPackage rec { pname = "auth0-python"; - version = "3.14.0"; + version = "3.16.2"; src = fetchPypi { inherit pname version; - sha256 = "ac7808d00676c5e7ffa9eaa228807ca1f8db7a0f4dc115337c80fb6d7eb2b50a"; + sha256 = "sha256-Slpwml1GDdxAZ4P6Vn2brrupRofiOHvmQF26l0gtTJM="; }; propagatedBuildInputs = [ requests + pyjwt ]; checkInputs = [ mock + pyjwt pytestCheckHook ]; - pytestFlagsArray = [ - # jwt package is not available in nixpkgs - "--ignore=auth0/v3/test/authentication/test_token_verifier.py" - ]; - - # tries to ping websites (e.g. google.com) disabledTests = [ + # tries to ping websites (e.g. google.com) "can_timeout" ]; + pythonImportsCheck = [ "auth0" ]; + meta = with lib; { description = "Auth0 Python SDK"; homepage = "https://github.com/auth0/auth0-python"; license = licenses.mit; - maintainers = [ maintainers.costrouc ]; + maintainers = with maintainers; [ costrouc ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/authcaptureproxy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/authcaptureproxy/default.nix index 0f1f6d0464..a780ae59be 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/authcaptureproxy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/authcaptureproxy/default.nix @@ -27,9 +27,10 @@ buildPythonPackage rec { postPatch = '' # https://github.com/alandtse/auth_capture_proxy/issues/14 - substituteInPlace pyproject.toml --replace \ - "poetry.masonry.api" \ - "poetry.core.masonry.api" + # https://github.com/alandtse/auth_capture_proxy/issues/15 + substituteInPlace pyproject.toml \ + --replace "poetry.masonry.api" "poetry.core.masonry.api" \ + --replace 'importlib-metadata = "^3.4.0"' 'importlib-metadata = "*"' ''; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/awesomeversion/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/awesomeversion/default.nix index 5eadd131d9..eed1728680 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/awesomeversion/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/awesomeversion/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "awesomeversion"; - version = "21.5.0"; + version = "21.6.0"; disabled = pythonOlder "3.8"; src = fetchFromGitHub { owner = "ludeeus"; repo = pname; rev = version; - sha256 = "sha256-0EOGWJZyvcRJyOqkcISvjL7o6lIaCwMKLftshsQCR6E="; + sha256 = "sha256-TODlLaj3bcNVHrly614oKe2OkhmowsJojpR7apUIojc="; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/awkward/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/awkward/default.nix index 4057758155..b39a729038 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/awkward/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/awkward/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "awkward"; - version = "1.2.3"; + version = "1.3.0"; src = fetchPypi { inherit pname version; - sha256 = "7d727542927a926f488fa62d04e2c5728c72660f17f822e627f349285f295063"; + sha256 = "b6021694adec9813842bad1987b837e439dabaf5b0dff9041201d238fca71fb4"; }; nativeBuildInputs = [ cmake ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aws-lambda-builders/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aws-lambda-builders/default.nix index 30059fe5a9..e1a955fbb8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aws-lambda-builders/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aws-lambda-builders/default.nix @@ -12,14 +12,14 @@ buildPythonPackage rec { pname = "aws-lambda-builders"; - version = "1.3.0"; + version = "1.4.0"; # No tests available in PyPI tarball src = fetchFromGitHub { owner = "awslabs"; repo = "aws-lambda-builders"; rev = "v${version}"; - sha256 = "1cfacp0a5qsaf3crcybslhbfwm1mqfyafj71dlvnidzx7b9bm60v"; + sha256 = "0g7qj74mgazc7y1w0d9vs276vmfb3svi5whn2c87bryhrwq650vf"; }; # Package is not compatible with Python 3.5 diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aws-sam-translator/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aws-sam-translator/default.nix index d996c34b50..166ba0b724 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aws-sam-translator/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aws-sam-translator/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "aws-sam-translator"; - version = "1.35.0"; + version = "1.36.0"; src = fetchPypi { inherit pname version; - sha256 = "5cf7faab3566843f3b44ef1a42a9c106ffb50809da4002faab818076dcc7bff8"; + sha256 = "fa1b990d9329d19052e7b91cf0b19371ed9d31a529054b616005884cd662b584"; }; # Tests are not included in the PyPI package diff --git a/third_party/nixpkgs/pkgs/development/python-modules/aws-xray-sdk/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/aws-xray-sdk/default.nix index 0e1c272b3c..a304fae19d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/aws-xray-sdk/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/aws-xray-sdk/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "aws-xray-sdk"; - version = "2.7.0"; + version = "2.8.0"; src = fetchPypi { inherit pname version; - sha256 = "697c9068e84dd5d2c1456def3fd0865f226046b5db4db56d738050e425960adf"; + sha256 = "90c2fcc982a770e86d009a4c3d2b5c3e372da91cb8284d982bae458e2c0bb268"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/awscrt/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/awscrt/default.nix index 26c4334e31..08e0563b96 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/awscrt/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/awscrt/default.nix @@ -2,7 +2,7 @@ buildPythonPackage rec { pname = "awscrt"; - version = "0.11.13"; + version = "0.11.24"; buildInputs = lib.optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ CoreFoundation Security ]); @@ -23,7 +23,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "sha256-G/bf2AzWp8AHL4of0zfX3jIYyTtmTLBIC2ZKiMi19c0="; + sha256 = "b8aa68bca404bf0085be0570eff5b542d01f7e8e3c0f9b0859abfe5e070162ff"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/awslambdaric/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/awslambdaric/default.nix index ff26bb6245..db55543ca5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/awslambdaric/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/awslambdaric/default.nix @@ -3,14 +3,14 @@ buildPythonPackage rec { pname = "awslambdaric"; - version = "1.0.0"; + version = "1.1.1"; disabled = isPy27; src = fetchFromGitHub { owner = "aws"; repo = "aws-lambda-python-runtime-interface-client"; - rev = "v${version}"; - sha256 = "13v1lsp3lxbqknvlb3gvljjf3wyrx5jg8sf9yfiaj1sm8pb8pmrf"; + rev = version; + sha256 = "1f8828y32yrf87bc933jhmjrvj746baibvpn0w21x3ji81vf6mri"; }; propagatedBuildInputs = [ simplejson ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-core/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-core/default.nix index e5394a616e..6718ca1d50 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-core/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-core/default.nix @@ -14,14 +14,14 @@ }: buildPythonPackage rec { - version = "1.14.0"; + version = "1.15.0"; pname = "azure-core"; disabled = isPy27; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "f32bb64aabe61f496255c16dd6c555a027da628109460bf27311cee0caf78f96"; + sha256 = "197917b98fec661c35392e32abec4f690ac2117371a814e25e57c224ce23cf1f"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-cosmos/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-cosmos/default.nix index 4fa05ada85..47e6fb6f03 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-cosmos/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-cosmos/default.nix @@ -7,12 +7,12 @@ }: buildPythonPackage rec { - version = "3.1.2"; + version = "3.2.0"; pname = "azure-cosmos"; src = fetchPypi { inherit pname version; - sha256 = "7f8ac99e4e40c398089fc383bfadcdc83376f72b88532b0cac0b420357cd08c7"; + sha256 = "4f77cc558fecffac04377ba758ac4e23f076dc1c54e2cf2515f85bc15cbde5c6"; }; propagatedBuildInputs = [ six requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-eventgrid/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-eventgrid/default.nix index f83040a4b3..8d2c8f21f2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-eventgrid/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-eventgrid/default.nix @@ -9,12 +9,12 @@ buildPythonPackage rec { pname = "azure-eventgrid"; - version = "4.2.0"; + version = "4.3.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "77af2c20abde7d8342da7993781605b440aeac0f95c4af13bb87465c3bd5fe35"; + sha256 = "bf50c8a4dc022ff9b1810800cb431b2c68b748eed160dd71fb8eb9bd860c7ecc"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-eventhub/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-eventhub/default.nix new file mode 100644 index 0000000000..21b711c8ab --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-eventhub/default.nix @@ -0,0 +1,37 @@ +{ lib +, buildPythonPackage +, fetchPypi +, azure-core +, uamqp +}: + +buildPythonPackage rec { + pname = "azure-eventhub"; + version = "5.5.0"; + + src = fetchPypi { + inherit pname version; + extension = "zip"; + sha256 = "7b757b4910ac74902564b38089b9861c1bc51ff15bd49ff056888f939f7c4c49"; + }; + + propagatedBuildInputs = [ + azure-core + uamqp + ]; + + # too complicated to set up + doCheck = false; + + pythonImportsCheck = [ + "azure.eventhub" + "azure.eventhub.aio" + ]; + + meta = with lib; { + description = "Microsoft Azure Event Hubs Client Library for Python"; + homepage = "https://github.com/Azure/azure-sdk-for-python/tree/master/sdk/eventhub/azure-eventhub"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-cognitiveservices/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-cognitiveservices/default.nix index 09800f9cef..cb782c6e58 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-cognitiveservices/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-cognitiveservices/default.nix @@ -9,12 +9,12 @@ buildPythonPackage rec { pname = "azure-mgmt-cognitiveservices"; - version = "11.0.0"; + version = "12.0.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "71414e3cd7445e44fc18f217f2d22df05c36877e1233328b2297d07ddf27e82a"; + sha256 = "73054bd19866577e7e327518afc8f47e1639a11aea29a7466354b81804f4a676"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-compute/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-compute/default.nix index c03855f816..171c45220d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-compute/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-compute/default.nix @@ -6,13 +6,13 @@ }: buildPythonPackage rec { - version = "20.0.0"; + version = "21.0.0"; pname = "azure-mgmt-compute"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "7920bea2e11d78fa616992813aea470a8fb50eab2e646e032e138f93d53b70e8"; + sha256 = "9227c3755a70bc377d70e35e1fc6f1fab109dd88974fd2c7129867ccaa10f813"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-containerregistry/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-containerregistry/default.nix index 821c7db0d3..8bc79a7df2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-containerregistry/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-containerregistry/default.nix @@ -1,21 +1,22 @@ { lib, buildPythonPackage, fetchPypi, isPy27 , azure-common +, azure-mgmt-core , msrest , msrestazure }: buildPythonPackage rec { - version = "2.8.0"; + version = "8.0.0"; pname = "azure-mgmt-containerregistry"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "193k07a77z7bj61zn2gxvvfqi20cgxksvxp7if71bwsl1l2y2jxj"; + sha256 = "480eb5d1bb910da4e87a5d7047e2f3e426083b14911ac64c48badd0218e9e756"; extension = "zip"; }; - propagatedBuildInputs = [ azure-common msrest msrestazure ]; + propagatedBuildInputs = [ azure-common azure-mgmt-core msrest msrestazure ]; # no tests included doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-eventgrid/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-eventgrid/default.nix index 1b244818f9..c3ba311d4c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-eventgrid/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-eventgrid/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "azure-mgmt-eventgrid"; - version = "8.0.0"; + version = "9.0.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "a8a6e1bb105a14f1d3545ecb07c190370f21a145f8ba51599ed169f1dc8d5dcc"; + sha256 = "aecbb69ecb010126c03668ca7c9a2be8e965568f5b560f0e7b5bc152b157b510"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-eventhub/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-eventhub/default.nix index 6b86973bcc..5bd45d3609 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-eventhub/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-eventhub/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "azure-mgmt-eventhub"; - version = "8.0.0"; + version = "9.0.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "ae02b1e3ccbb9ec45849de544dea4d8ef36ea767707207d055ae2b4f756c0d79"; + sha256 = "181f72adf9287741ded8e386c8934a722d08399d781ce1c452f0482aac1f019b"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-hdinsight/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-hdinsight/default.nix index 5547eb032d..02d2c6a013 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-hdinsight/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-hdinsight/default.nix @@ -6,13 +6,13 @@ }: buildPythonPackage rec { - version = "7.0.0"; + version = "8.0.0"; pname = "azure-mgmt-hdinsight"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "d0070817ee2be611d45af91eabc5665dd53f024eaa7a55e490ace4f71a55c733"; + sha256 = "2c43f1a62e5b83304392b0ad7cfdaeef2ef2f47cb3fdfa2577b703b6ea126000"; extension = "zip"; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-kusto/azure-mgmt-apimanagement/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-kusto/azure-mgmt-apimanagement/default.nix index 9f5c04adb2..6cf775c211 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-kusto/azure-mgmt-apimanagement/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-kusto/azure-mgmt-apimanagement/default.nix @@ -5,13 +5,13 @@ }: buildPythonPackage rec { - version = "0.1.0"; + version = "0.3.0"; pname = "azure-mgmt-apimanagement"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "06bqqkn5mx127x1z7ycm6rl8ajxlrmrm2kcdpgkbl4baii1x6iax"; + sha256 = "ec363581ef950945447e45d259441cb690a4b790057c7b8470ad8a6eeca04feb"; extension = "zip"; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-managementgroups/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-managementgroups/default.nix index e09646373b..eb744b78ff 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-managementgroups/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-managementgroups/default.nix @@ -4,24 +4,26 @@ , msrest , msrestazure , azure-common +, azure-mgmt-core , azure-mgmt-nspkg , isPy3k }: buildPythonPackage rec { pname = "azure-mgmt-managementgroups"; - version = "0.2.0"; + version = "1.0.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "3d5237947458dc94b4a392141174b1c1258d26611241ee104e9006d1d798f682"; + sha256 = "bab9bd532a1c34557f5b0ab9950e431e3f00bb96e8a3ce66df0f6ce2ae19cd73"; }; propagatedBuildInputs = [ msrest msrestazure azure-common + azure-mgmt-core ] ++ lib.optionals (!isPy3k) [ azure-mgmt-nspkg ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-managementpartner/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-managementpartner/default.nix index d42fb5b05c..169f52c86d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-managementpartner/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-managementpartner/default.nix @@ -3,22 +3,24 @@ , fetchPypi , msrestazure , azure-common +, azure-mgmt-core , azure-mgmt-nspkg }: buildPythonPackage rec { pname = "azure-mgmt-managementpartner"; - version = "0.1.1"; + version = "1.0.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "1bvcmx7dkf2adi26z7c2ga63ggpzdfqj8q1gzcic1yn03v6nb8i7"; + sha256 = "1cd591848454a115c216d216a3fb7802c1b5de04b105e2696e4237b0f8768f2f"; }; propagatedBuildInputs = [ msrestazure azure-common + azure-mgmt-core azure-mgmt-nspkg ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-media/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-media/default.nix index 6320588ed4..b4d25a1493 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-media/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-media/default.nix @@ -4,24 +4,26 @@ , msrest , msrestazure , azure-common +, azure-mgmt-core , azure-mgmt-nspkg , isPy3k }: buildPythonPackage rec { pname = "azure-mgmt-media"; - version = "3.1.0"; + version = "7.0.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "c35316d3d63dc99feb97ad7f12a7b411046537f5c6d79ef14f6067bcc379292f"; + sha256 = "b45e82a594ed91cd5aa7a5cd5d01f038b7ac3cf12233e7ba2beaaa3477900e8e"; }; propagatedBuildInputs = [ msrest msrestazure azure-common + azure-mgmt-core ] ++ lib.optionals (!isPy3k) [ azure-mgmt-nspkg ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-netapp/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-netapp/default.nix index 35dc7ef05a..ccb7c55924 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-netapp/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-netapp/default.nix @@ -6,13 +6,13 @@ }: buildPythonPackage rec { - version = "2.0.0"; + version = "3.0.0"; pname = "azure-mgmt-netapp"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "ff3b663e36c961e86fc0cdbd6f9fb9fb863d3e7db9035fe713af7299e809ee5e"; + sha256 = "5a293118c5089c4ec81f676b76aa95c60408a3443a46131d22978ffb81fe4605"; extension = "zip"; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-rdbms/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-rdbms/default.nix index c7cb274d68..56e5314216 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-rdbms/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-rdbms/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "azure-mgmt-rdbms"; - version = "8.0.0"; + version = "8.1.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "8b018543048fc4fddb4155d9f22246ad0c4be2fb582a29dbb21ec4022724a119"; + sha256 = "b30003a94c306533ebfb741b824dd1cc6c0a1810200926675e6b808bd0459d19"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-recoveryservicesbackup/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-recoveryservicesbackup/default.nix index 4ce18c4ae3..25aae3ffad 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-recoveryservicesbackup/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-recoveryservicesbackup/default.nix @@ -4,23 +4,25 @@ , msrest , msrestazure , azure-common +, azure-mgmt-core , azure-mgmt-nspkg }: buildPythonPackage rec { pname = "azure-mgmt-recoveryservicesbackup"; - version = "0.11.0"; + version = "1.0.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "f2b85d1d7d7db2af106000910ea5f8b95639874176a5de2f7ab37a2caa67af6b"; + sha256 = "fd915aa6a76ef9e0e963615d4c909400c8d5646e26273ae25fa1418ce61e28d2"; }; propagatedBuildInputs = [ msrest msrestazure azure-common + azure-mgmt-core azure-mgmt-nspkg ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-servicefabric/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-servicefabric/default.nix index abb117d004..661a507291 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-servicefabric/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-servicefabric/default.nix @@ -6,23 +6,25 @@ , msrest , msrestazure , azure-common +, azure-mgmt-core , azure-mgmt-nspkg }: buildPythonPackage rec { pname = "azure-mgmt-servicefabric"; - version = "0.5.0"; + version = "1.0.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "5771f24516c8d4a27f5569f23f3a606f6f106e4ad502eec7f38aedfcd3eadc74"; + sha256 = "de35e117912832c1a9e93109a8d24cab94f55703a9087b2eb1c5b0655b3b1913"; }; propagatedBuildInputs = [ msrest msrestazure azure-common + azure-mgmt-core azure-mgmt-nspkg ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-sql/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-sql/default.nix index e41e13f2b5..83cffa0a29 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-sql/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-sql/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "azure-mgmt-sql"; - version = "2.0.0"; + version = "2.1.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "191accd6e5b47f93a10cebb94e2ca5086f0b6f4afd0290b8596206cd4acb0d5c"; + sha256 = "5474387ec3417b0a277de2b42c6d1992256a6a9717ca1ada0e8dad01238b9919"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-web/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-web/default.nix index 9bd5371412..b2643eb336 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-web/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-mgmt-web/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "azure-mgmt-web"; - version = "2.0.0"; + version = "3.0.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "0040e1c9c795f7bebe43647ff30b62cb0db7175175df5cbfa1e554a6a277b81e"; + sha256 = "274239993a4705c9e1135842137d77a703f63d14ee5c1a5ee87fe1f8a471a061"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-servicebus/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-servicebus/default.nix index d89def355f..93f70108c3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-servicebus/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-servicebus/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "azure-servicebus"; - version = "7.2.0"; + version = "7.3.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "919e81d6d9e6e098dbb7abf51d90282a73c0071846b104e70488417cd5d07863"; + sha256 = "sha256-NigQxqZjekZjlu6wSrziVwbEBclxfwSK4svd0eHPKr8="; }; propagatedBuildInputs = [ @@ -35,7 +35,7 @@ buildPythonPackage rec { pythonImportsCheck = lib.optionals isPy3k [ "azure.servicebus" ]; meta = with lib; { - description = "This is the Microsoft Azure Service Bus Client Library"; + description = "Microsoft Azure Service Bus Client Library"; homepage = "https://github.com/Azure/azure-sdk-for-python"; license = licenses.mit; maintainers = with maintainers; [ maxwilson ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/azure-storage-file-share/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/azure-storage-file-share/default.nix index a1322c03c9..eb2fb40b33 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/azure-storage-file-share/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/azure-storage-file-share/default.nix @@ -12,13 +12,13 @@ buildPythonPackage rec { pname = "azure-storage-file-share"; - version = "12.4.2"; + version = "12.5.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "6c458d1e3db38fdd502d8f77107c81e6859654f02c0e7f2a98214289d9e0dde2"; + sha256 = "ed82e9bf8d25d62e50996604fce701cec6a39ec0ceba6efbf8790f7f8b7746a8"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/b2sdk/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/b2sdk/default.nix index 47ed0fe5fd..c6122e15a8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/b2sdk/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/b2sdk/default.nix @@ -16,12 +16,12 @@ buildPythonPackage rec { pname = "b2sdk"; - version = "1.7.0"; + version = "1.9.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "sha256-8X5XLh9SxZI1P7/2ZjOy8ipcEzTcriJfGI7KlMXncv4="; + sha256 = "ff9c27c89f53583fd83c711d0a642d9b3bdbb8682c2e8e2315674b517cb441ec"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/backports-zoneinfo/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/backports-zoneinfo/default.nix index a9bc0b5595..0b4703e265 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/backports-zoneinfo/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/backports-zoneinfo/default.nix @@ -1,6 +1,9 @@ { lib, buildPythonPackage, fetchFromGitHub , pythonOlder +, python +, substituteAll , importlib-resources +, tzdata , hypothesis , pytestCheckHook }: @@ -16,7 +19,17 @@ buildPythonPackage rec { sha256 = "sha256-00xdDOVdDanfsjQTd3yjMN2RFGel4cWRrAA3CvSnl24="; }; - propagatedBuildInputs = lib.optionals (pythonOlder "3.7") [ + patches = [ + (substituteAll { + name = "zoneinfo-path"; + src = ./zoneinfo.patch; + zoneinfo = "${tzdata}/lib/${python.libPrefix}/site-packages/tzdata/zoneinfo"; + }) + ]; + + propagatedBuildInputs = [ + tzdata + ] ++ lib.optionals (pythonOlder "3.7") [ importlib-resources ]; @@ -27,8 +40,14 @@ buildPythonPackage rec { pytestCheckHook ]; - # unfortunately /etc/zoneinfo doesn't exist in sandbox, and many tests fail - doCheck = false; + disabledTests = [ + # AssertionError: 'AEDT' != 'AEST' + "test_folds_and_gaps" + # AssertionError: 0 != 1 : (datetime.datetime(1917, 3, 25, 2, 0, 1, tzinfo=backports.zoneinfo.ZoneInfo(key='Australia/Sydney')), datetime.datetime(1917, 3, 24, 15, 0, tzinfo=datetime.timezone.utc)) + "test_folds_from_utc" + # backports.zoneinfo._common.ZoneInfoNotFoundError: 'No time zone found with key Eurasia/Badzone' + "test_bad_keys" + ]; meta = with lib; { description = "Backport of the standard library module zoneinfo"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/backports-zoneinfo/zoneinfo.patch b/third_party/nixpkgs/pkgs/development/python-modules/backports-zoneinfo/zoneinfo.patch new file mode 100644 index 0000000000..69dd75030a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/backports-zoneinfo/zoneinfo.patch @@ -0,0 +1,17 @@ +diff --git a/src/backports/zoneinfo/_tzpath.py b/src/backports/zoneinfo/_tzpath.py +index 9baaf6b..3f842af 100644 +--- a/src/backports/zoneinfo/_tzpath.py ++++ b/src/backports/zoneinfo/_tzpath.py +@@ -24,10 +24,7 @@ def reset_tzpath(to=None): + base_tzpath = _parse_python_tzpath(env_var) + elif sys.platform != "win32": + base_tzpath = [ +- "/usr/share/zoneinfo", +- "/usr/lib/zoneinfo", +- "/usr/share/lib/zoneinfo", +- "/etc/zoneinfo", ++ "@zoneinfo@" + ] + + base_tzpath.sort(key=lambda x: not os.path.exists(x)) + diff --git a/third_party/nixpkgs/pkgs/development/python-modules/backports_functools_lru_cache/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/backports_functools_lru_cache/default.nix index 8a9bc22838..586176300b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/backports_functools_lru_cache/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/backports_functools_lru_cache/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "backports.functools_lru_cache"; - version = "1.6.3"; + version = "1.6.4"; src = fetchPypi { inherit pname version; - sha256 = "d84e126e2a29e4fde8931ff8131240bbf30a0e7dbcc3897a8dbd8ea5ac11419c"; + sha256 = "d5ed2169378b67d3c545e5600d363a923b09c456dab1593914935a68ad478271"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/batchspawner/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/batchspawner/default.nix index 2acfa5ecd1..2b7cd1b21e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/batchspawner/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/batchspawner/default.nix @@ -7,14 +7,14 @@ buildPythonPackage rec { pname = "batchspawner"; - version = "1.0.1"; + version = "1.1.0"; disabled = isPy27; src = fetchFromGitHub { owner = "jupyterhub"; repo = "batchspawner"; rev = "v${version}"; - sha256 = "0vqf3qc2yp52441s6xwgixgl37976qqgpd9sshbgh924j314v1yv"; + sha256 = "0zv485b7fk5zlwgp5fyibanqzbpisdl2a0gz70fwdj4kl462axnw"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bids-validator/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bids-validator/default.nix index d62c929e87..aee7147f5b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/bids-validator/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/bids-validator/default.nix @@ -4,12 +4,12 @@ }: buildPythonPackage rec { - version = "1.6.0"; + version = "1.7.2"; pname = "bids-validator"; src = fetchPypi { inherit pname version; - sha256 = "6858eab83068d34a9d41155c931ca8db9faef2272710d9730c2135915c19be82"; + sha256 = "12398831a3a3a2ed7c67e693cf596610c23dd23e0889bfeae0830bbd1d41e5b9"; }; # needs packages which are not available in nixpkgs diff --git a/third_party/nixpkgs/pkgs/development/python-modules/billiard/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/billiard/default.nix index 2d4eabf215..79aca1e4a9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/billiard/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/billiard/default.nix @@ -1,23 +1,27 @@ -{ lib, buildPythonPackage, fetchPypi, isPyPy, pytestCheckHook, case, psutil, fetchpatch }: +{ lib +, buildPythonPackage +, fetchPypi +, isPyPy +, pytestCheckHook +, case +, psutil +}: buildPythonPackage rec { pname = "billiard"; - version = "3.6.3.0"; + version = "3.6.4.0"; disabled = isPyPy; src = fetchPypi { inherit pname version; - sha256 = "0spssl3byzqsplra166d59jx8iqfxyzvcbx7vybkmwr5ck72a5yr"; + sha256 = "0ismj2p8c66ykpss94rs0bfra5agxxmljz8r3gaq79r8valfb799"; }; - patches = [(fetchpatch { - # Add Python 3.9 support to spawnv_passfds() - # Should be included in next release after 3.6.3.0 - url = "https://github.com/celery/billiard/pull/310/commits/a508ebafadcfe2e25554b029593f3e66d01ede6c.patch"; - sha256 = "05zsr1bvjgi01qg7r274c0qvbn65iig3clyz14c08mpfyn38h84i"; - excludes = [ "tox.ini" ]; - })]; - checkInputs = [ pytestCheckHook case psutil ]; + checkInputs = [ + case + psutil + pytestCheckHook + ]; meta = with lib; { homepage = "https://github.com/celery/billiard"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bimmer-connected/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bimmer-connected/default.nix new file mode 100644 index 0000000000..c7abe9cfd9 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/bimmer-connected/default.nix @@ -0,0 +1,43 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, pbr +, requests +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "bimmer-connected"; + version = "0.7.15"; + + disabled = pythonOlder "3.5"; + + src = fetchFromGitHub { + owner = "bimmerconnected"; + repo = "bimmer_connected"; + rev = version; + sha256 = "193m16rrq7mfvzjcq823icdr9fp3i8grqqn3ci8zhcsq6w3vnb90"; + }; + + nativeBuildInputs = [ + pbr + ]; + + PBR_VERSION = version; + + propagatedBuildInputs = [ + requests + ]; + + checkInputs = [ + pytestCheckHook + ]; + + meta = with lib; { + description = "Library to read data from the BMW Connected Drive portal"; + homepage = "https://github.com/bimmerconnected/bimmer_connected"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/biopython/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/biopython/default.nix index 43b48aa03a..002b3ce2e2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/biopython/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/biopython/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "biopython"; - version = "1.78"; + version = "1.79"; src = fetchPypi { inherit pname version; - sha256 = "1ee0a0b6c2376680fea6642d5080baa419fd73df104a62d58a8baf7a8bbe4564"; + sha256 = "edb07eac99d3b8abd7ba56ff4bedec9263f76dfc3c3f450e7d2e2bcdecf8559b"; }; disabled = !isPy3k; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bip_utils/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bip_utils/default.nix index 94f6e3df8f..3d3c85eea3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/bip_utils/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/bip_utils/default.nix @@ -8,7 +8,7 @@ buildPythonPackage rec { pname = "bip_utils"; - version = "1.9.0"; + version = "1.11.1"; disabled = pythonOlder "3.6"; @@ -16,7 +16,7 @@ buildPythonPackage rec { owner = "ebellocchia"; repo = pname; rev = "v${version}"; - sha256 = "0i1jdpdsrc8cal5x0b1am9mgbca69ymxlaqpkw0y4d0m3m6vs33k"; + sha256 = "0r8h979rklq7cvl0b449mfrx62dv367s31zgwfqn81kj72i3ndg4"; }; propagatedBuildInputs = [ ecdsa pysha3 ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bitarray/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bitarray/default.nix index c3965b10a2..985c5429f7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/bitarray/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/bitarray/default.nix @@ -1,12 +1,16 @@ -{ lib, buildPythonPackage, fetchPypi, python }: +{ lib +, buildPythonPackage +, fetchPypi +, python +}: buildPythonPackage rec { pname = "bitarray"; - version = "2.0.1"; + version = "2.1.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-7DpPbXEaee0jrqlUFjjTNT3D8IPyk6ExgLFLSC4+Ge8="; + sha256 = "a24aff72a7f1b09571b5daf9dbfcffd98481be1fe085ae5ef662cf11452a97e0"; }; checkPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bitvavo-aio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bitvavo-aio/default.nix new file mode 100644 index 0000000000..39094d74e5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/bitvavo-aio/default.nix @@ -0,0 +1,35 @@ +{ lib +, aiohttp +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +}: + +buildPythonPackage rec { + pname = "bitvavo-aio"; + version = "1.0.3"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "cyberjunky"; + repo = pname; + rev = version; + sha256 = "1d9nbbvv7xnkixj03sfhs2da5j3i2m7p73r7j1yb7b39zas2rbig"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "bitvavo" ]; + + meta = with lib; { + description = "Python client for Bitvavo crypto exchange API"; + homepage = "https://github.com/cyberjunky/bitvavo-aio"; + license = licenses.asl20; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bizkaibus/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bizkaibus/default.nix new file mode 100644 index 0000000000..7de8f2ca22 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/bizkaibus/default.nix @@ -0,0 +1,35 @@ +{ lib +, requests +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +}: + +buildPythonPackage rec { + pname = "bizkaibus"; + version = "0.1.4"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "UgaitzEtxebarria"; + repo = "BizkaibusRTPI"; + rev = version; + sha256 = "1v7k9fclndb4x9npzhzj68kbrc3lb3wr6cwal2x46ib207593ckr"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "bizkaibus" ]; + + meta = with lib; { + description = "Python module to get information about Bizkaibus buses"; + homepage = "https://github.com/UgaitzEtxebarria/BizkaibusRTPI"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/black/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/black/default.nix index bf82df4afa..6f4e05767b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/black/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/black/default.nix @@ -5,6 +5,7 @@ , appdirs , attrs , click +, colorama , dataclasses , mypy-extensions , pathspec @@ -12,17 +13,20 @@ , regex , toml , typed-ast -, typing-extensions }: +, typing-extensions +, uvloop +}: + buildPythonPackage rec { pname = "black"; - version = "21.5b1"; + version = "21.6b0"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "1cdkrl5vw26iy7s23v2zpr39m6g5xsgxhfhagzzflgfbvdc56s93"; + sha256 = "016f6bhnnnbcrrh3cvmpk77ww0nykv5n1qvgf8b3044dm14264yw"; }; nativeBuildInputs = [ setuptools-scm ]; @@ -31,7 +35,7 @@ buildPythonPackage rec { # Black starts a local server and needs to bind a local address. __darwinAllowLocalNetworking = true; - checkInputs = [ pytestCheckHook parameterized ]; + checkInputs = [ pytestCheckHook parameterized ]; preCheck = '' export PATH="$PATH:$out/bin" @@ -39,6 +43,9 @@ buildPythonPackage rec { # The top directory /build matches black's DEFAULT_EXCLUDE regex. # Make /build the project root for black tests to avoid excluding files. touch ../.git + '' + lib.optionalString stdenv.isDarwin '' + # Work around https://github.com/psf/black/issues/2105 + export TMPDIR="/tmp" ''; disabledTests = [ @@ -55,19 +62,21 @@ buildPythonPackage rec { appdirs attrs click + colorama mypy-extensions pathspec regex toml - typed-ast - typing-extensions - ] ++ lib.optional (pythonOlder "3.7") dataclasses; + typed-ast # required for tests and python2 extra + uvloop + ] ++ lib.optional (pythonOlder "3.7") dataclasses + ++ lib.optional (pythonOlder "3.8") typing-extensions; meta = with lib; { description = "The uncompromising Python code formatter"; - homepage = "https://github.com/psf/black"; - changelog = "https://github.com/psf/black/blob/${version}/CHANGES.md"; - license = licenses.mit; + homepage = "https://github.com/psf/black"; + changelog = "https://github.com/psf/black/blob/${version}/CHANGES.md"; + license = licenses.mit; maintainers = with maintainers; [ sveitser ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/blebox-uniapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/blebox-uniapi/default.nix new file mode 100644 index 0000000000..c3dbe3ccd3 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/blebox-uniapi/default.nix @@ -0,0 +1,49 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, aiohttp +, semver +, asynctest +, deepmerge +, pytest-asyncio +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "blebox-uniapi"; + version = "1.3.3"; + + src = fetchFromGitHub { + owner = "blebox"; + repo = "blebox_uniapi"; + rev = "v${version}"; + sha256 = "0qvv2697yhqjmgvh37h8wgz3a77n61kqmxvsk4pf47wn43hks15c"; + }; + + postPatch = '' + substituteInPlace setup.py \ + --replace "pytest-runner" "" + ''; + + propagatedBuildInputs = [ + aiohttp + semver + ]; + + checkInputs = [ + asynctest + deepmerge + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "blebox_uniapi" ]; + + meta = with lib; { + description = "Python API for accessing BleBox smart home devices"; + homepage = "https://github.com/blebox/blebox_uniapi"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/blessed/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/blessed/default.nix index 6be290f0f7..f3a6a9dd3b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/blessed/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/blessed/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "blessed"; - version = "1.18.0"; + version = "1.18.1"; src = fetchPypi { inherit pname version; - sha256 = "1312879f971330a1b7f2c6341f2ae7e2cbac244bfc9d0ecfbbecd4b0293bc755"; + sha256 = "8b09936def6bc06583db99b65636b980075733e13550cb6af262ce724a55da23"; }; checkInputs = [ pytest mock glibcLocales ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/blinkpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/blinkpy/default.nix new file mode 100644 index 0000000000..a735148052 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/blinkpy/default.nix @@ -0,0 +1,48 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, python-dateutil +, python-slugify +, requests +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "blinkpy"; + version = "0.17.1"; + + src = fetchFromGitHub { + owner = "fronzbot"; + repo = "blinkpy"; + rev = "v${version}"; + sha256 = "11h4r2vkrlxwjig1lay1n5wpny5isfgz85f7lsn8ndnqa2wpsymp"; + }; + + propagatedBuildInputs = [ + python-dateutil + python-slugify + requests + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ + "blinkpy" + "blinkpy.api" + "blinkpy.auth" + "blinkpy.blinkpy" + "blinkpy.camera" + "blinkpy.helpers.util" + "blinkpy.sync_module" + ]; + + meta = with lib; { + description = "Python library for the Blink Camera system"; + homepage = "https://github.com/fronzbot/blinkpy"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/blurhash/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/blurhash/default.nix new file mode 100644 index 0000000000..665f08f798 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/blurhash/default.nix @@ -0,0 +1,39 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pytestCheckHook +, pillow +, numpy +}: + +buildPythonPackage rec { + pname = "blurhash"; + version = "1.1.4"; + + src = fetchFromGitHub { + owner = "halcy"; + repo = "blurhash-python"; + # There are no tags: https://github.com/halcy/blurhash-python/issues/4 + rev = "22e081ef1c24da1bb5c5eaa2c1d6649724deaef8"; + sha256 = "1qq6mhydlp7q3na4kmaq3871h43wh3pyfyxr4b79bia73wjdylxf"; + }; + + postPatch = '' + sed -i '/^addopts/d' setup.cfg + ''; + + checkInputs = [ + pytestCheckHook + pillow + numpy + ]; + + pythonImportsCheck = [ "blurhash" ]; + + meta = with lib; { + description = "Pure-Python implementation of the blurhash algorithm"; + homepage = "https://github.com/halcy/blurhash-python"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bme680/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bme680/default.nix index cdae502e7e..9797a7ab0d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/bme680/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/bme680/default.nix @@ -1,30 +1,39 @@ { lib , buildPythonPackage , fetchFromGitHub +, mock , smbus-cffi , pytestCheckHook }: buildPythonPackage rec { pname = "bme680"; - version = "1.0.5"; + version = "1.1.1"; src = fetchFromGitHub { owner = "pimoroni"; repo = "bme680-python"; rev = "v${version}"; - sha256 = "sha256-oIXh1JnGTI/Cj4MQFpWq+sWR2X+ioCsK0Q+T7wPITCQ="; + sha256 = "sha256-gmdRxMJ0DoCyNcb/bYp746PBi4HktHAAYOcSQJ0Uheg="; }; - propagatedBuildInputs = [ smbus-cffi ]; + propagatedBuildInputs = [ + smbus-cffi + ]; preBuild = '' cd library ''; - checkInputs = [ pytestCheckHook ]; - # next release will have tests, but not the current one - doCheck = false; + checkInputs = [ + mock + pytestCheckHook + ]; + + postPatch = '' + substituteInPlace library/setup.cfg \ + --replace "smbus" "smbus-cffi" + ''; pythonImportsCheck = [ "bme680" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bokeh/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bokeh/default.nix index 18fea10366..6677d9ceac 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/bokeh/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/bokeh/default.nix @@ -34,11 +34,11 @@ buildPythonPackage rec { pname = "bokeh"; # update together with panel which is not straightforward - version = "2.3.0"; + version = "2.3.2"; src = fetchPypi { inherit pname version; - sha256 = "dd417708f90702190222b1068a645acae99e66d4b58d7a336d545aeaa04e9b40"; + sha256 = "fcc0d0a3129ae457cdb0a4f503843a4d13d1f5d07af7748424ea8c7ddfc321f1"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bond-api/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bond-api/default.nix new file mode 100644 index 0000000000..39a6cc4433 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/bond-api/default.nix @@ -0,0 +1,39 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, aiohttp +, aioresponses +, pytest-asyncio +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "bond-api"; + version = "0.1.12"; + + src = fetchFromGitHub { + owner = "prystupa"; + repo = "bond-api"; + rev = "v${version}"; + sha256 = "0zqaqqadr4x4vmq28nfk5x67gfwqqfy19z0cgrpxlbbvxamccym0"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + checkInputs = [ + aioresponses + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "bond_api" ]; + + meta = with lib; { + description = "Asynchronous Python wrapper library over Bond Local API"; + homepage = "https://github.com/prystupa/bond-api"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/boost-histogram/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/boost-histogram/default.nix new file mode 100644 index 0000000000..f644c8c9c2 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/boost-histogram/default.nix @@ -0,0 +1,26 @@ +{ lib, fetchPypi, buildPythonPackage, isPy3k, boost, numpy, pytestCheckHook, pytest-benchmark }: + +buildPythonPackage rec { + pname = "boost-histogram"; + version = "1.0.2"; + disabled = !isPy3k; + + src = fetchPypi { + pname = "boost_histogram"; + inherit version; + sha256 = "b79cb9a00c5b8e44ff24ffcbec0ce5d3048dd1570c8592066344b6d2f2369fa2"; + }; + + buildInputs = [ boost ]; + propagatedBuildInputs = [ numpy ]; + + checkInputs = [ pytestCheckHook pytest-benchmark ]; + + meta = with lib; { + description = "Python bindings for the C++14 Boost::Histogram library"; + homepage = "https://github.com/scikit-hep/boost-histogram"; + license = licenses.bsd3; + platforms = platforms.unix; + maintainers = with maintainers; [ veprbl ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/boschshcpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/boschshcpy/default.nix new file mode 100644 index 0000000000..4e480514bc --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/boschshcpy/default.nix @@ -0,0 +1,41 @@ +{ lib +, buildPythonPackage +, cryptography +, fetchFromGitHub +, getmac +, pythonOlder +, requests +, zeroconf +}: + +buildPythonPackage rec { + pname = "boschshcpy"; + version = "0.2.19"; + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "tschamm"; + repo = pname; + rev = version; + sha256 = "sha256-HxLy3tGMn2KDfD37yKLoImpfXGoaoGB6VEanNu/WMnk="; + }; + + propagatedBuildInputs = [ + cryptography + getmac + requests + zeroconf + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "boschshcpy" ]; + + meta = with lib; { + description = "Python module to work with the Bosch Smart Home Controller API"; + homepage = "https://github.com/tschamm/boschshcpy"; + license = with licenses; [ bsd3 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/boto3/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/boto3/default.nix index afeefbdf55..c8b8210f65 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/boto3/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/boto3/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "boto3"; - version = "1.17.52"; # N.B: if you change this, change botocore and awscli to a matching version + version = "1.17.97"; # N.B: if you change this, change botocore and awscli to a matching version src = fetchPypi { inherit pname version; - sha256 = "sha256-7WQMF8l68om+RpN0DBy/laRW6cSV45c6Htb1GjloRtI="; + sha256 = "0ab5afc51461c30f27aebef944211d16f47697b98ff8d2e2f6e49e59584853bb"; }; propagatedBuildInputs = [ botocore jmespath s3transfer ] ++ lib.optionals (!isPy3k) [ futures ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/botocore/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/botocore/default.nix index f34cc34334..8a21eb455e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/botocore/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/botocore/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "botocore"; - version = "1.20.52"; # N.B: if you change this, change boto3 and awscli to a matching version + version = "1.20.97"; # N.B: if you change this, change boto3 and awscli to a matching version src = fetchPypi { inherit pname version; - sha256 = "sha256-3V9YCOxIqZm5Y0s4etarehojuh+XEqh1Bm0jSAj4qmI="; + sha256 = "f7e119cf3e0f4a36100f0e983583afa91a84fb27c479a1716820aee4f2e190ab"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/braintree/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/braintree/default.nix index 7e1c8f5a58..6d64def54a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/braintree/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/braintree/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "braintree"; - version = "4.7.0"; + version = "4.10.0"; src = fetchPypi { inherit pname version; - sha256 = "25a95f95acb7f180b37f8dcf4df7efa84ae0ba6ad9dc4ba0e724e2cc534c3483"; + sha256 = "f934a329c7a2b3f7058d5c733cc95da694f66afb5a789162ec701ba4d26a0d90"; }; propagatedBuildInputs = [ requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bravia-tv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bravia-tv/default.nix index 15f292953b..849f7e0b0a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/bravia-tv/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/bravia-tv/default.nix @@ -1,20 +1,25 @@ -{ lib, fetchFromGitHub, buildPythonPackage, isPy27, requests }: +{ lib +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +, requests +}: buildPythonPackage rec { pname = "bravia-tv"; - version = "1.0.8"; - disabled = isPy27; + version = "1.0.11"; + disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "dcnielsen90"; repo = "python-bravia-tv"; rev = "v${version}"; - sha256 = "0djwy4z1y173q3mnbngp754yrwzmm6h3x0rshvrvd64b78x1bsmp"; + sha256 = "sha256-g47bDd5bZl0jad3o6T1jJLcnZj8nx944kz3Vxv8gD2U="; }; propagatedBuildInputs = [ requests ]; - # package does not include tests + # Package does not include tests doCheck = false; pythonImportsCheck = [ "bravia_tv" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/breathe/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/breathe/default.nix index 1ca33222ef..d863d94639 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/breathe/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/breathe/default.nix @@ -1,13 +1,13 @@ { lib, fetchPypi, buildPythonPackage, docutils, six, sphinx, isPy3k, isPy27 }: buildPythonPackage rec { - version = "4.28.0"; + version = "4.30.0"; pname = "breathe"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "11e35a5fed7545554be51b70eea4578643d8c08972bea43774f413943006b17a"; + sha256 = "363dec85abc0c4b3f22628b0cf82cc2dc46c4397d8a18312d1a7d1365d49b014"; }; propagatedBuildInputs = [ docutils six sphinx ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/browser-cookie3/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/browser-cookie3/default.nix index 7b579a84ba..d4d52b9b03 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/browser-cookie3/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/browser-cookie3/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "browser-cookie3"; - version = "0.12.0"; + version = "0.12.1"; src = fetchPypi { inherit pname version; - sha256 = "5f26422091ad0e97375d565f8fbacfaf314d0722db35c921635eab23686e4fc4"; + sha256 = "72c1e6aa6a98adab3a6797b889664bdbfddc287474dd8e774da37a854ec32185"; }; disabled = !isPy3k; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bsdiff4/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bsdiff4/default.nix index 339e649c53..5687e9c7bf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/bsdiff4/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/bsdiff4/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "bsdiff4"; - version = "1.2.0"; + version = "1.2.1"; src = fetchPypi { inherit pname version; - sha256 = "17fc0dd4204x5gqapvbrc4kv83jdajs00jxm739586pl0iapybrw"; + sha256 = "87cffc7522effdda03fd1564b212ad2279c0af50d16c3e65776f80acb6705d4b"; }; checkPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/btrees/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/btrees/default.nix index 3da6852c54..1fadf927a4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/btrees/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/btrees/default.nix @@ -9,7 +9,7 @@ buildPythonPackage rec { pname = "BTrees"; - version = "4.7.2"; + version = "4.9.2"; buildInputs = [ transaction ]; propagatedBuildInputs = [ persistent zope_interface ]; @@ -23,7 +23,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "7ce4a5eb5c135bcb5c06b5bd1ca6fd7fd39d8631306182307ed8bc30d3033846"; + sha256 = "d33323655924192c4ac998d9ee3002e787915d19c1e17a6baf47c9a63d9556e3"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/bugsnag/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/bugsnag/default.nix index 3384536848..65cfa74777 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/bugsnag/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/bugsnag/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "bugsnag"; - version = "4.0.2"; + version = "4.0.3"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "7a49dacf055a8c6dda4ce714acd91fabe9546f1ad826276918a26603a8b5489a"; + sha256 = "0b70bc95e4e4f98b2eef7a3dadfdc50c1a40da7f50446adf43be05574a4b9f7c"; }; propagatedBuildInputs = [ six webob ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/buienradar/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/buienradar/default.nix new file mode 100644 index 0000000000..a366e0cdd3 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/buienradar/default.nix @@ -0,0 +1,58 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, docopt +, pytz +, requests +, setuptools +, vincenty +, xmltodict +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "buienradar"; + version = "1.0.4"; + + disabled = pythonOlder "3.4"; + + src = fetchFromGitHub { + owner = "mjj4791"; + repo = "python-buienradar"; + rev = version; + sha256 = "1s0m5x7wdvzzsm797lh6531k614ybh7z0cikxjxqw377mivpz4wq"; + }; + + propagatedBuildInputs = [ + docopt + pytz + requests + setuptools + vincenty + xmltodict + ]; + + checkInputs = [ + pytestCheckHook + ]; + + disabledTests = [ + # require network connection + "test_rain_data" + "test_json_data" + "test_xml_data" + ]; + + pythonImportsCheck = [ + "buienradar.buienradar" + "buienradar.constants" + ]; + + meta = with lib; { + description = "Library and CLI tools for interacting with buienradar"; + homepage = "https://github.com/mjj4791/python-buienradar"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cachetools/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cachetools/default.nix index a160c5ea94..fe7ad48274 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cachetools/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cachetools/default.nix @@ -7,7 +7,7 @@ buildPythonPackage rec { pname = "cachetools"; - version = "4.2.1"; + version = "4.2.2"; disabled = isPy27; @@ -15,7 +15,7 @@ buildPythonPackage rec { owner = "tkem"; repo = pname; rev = "v${version}"; - sha256 = "1b662ph8m2d05d2vi3izgnr6v7h9zfvscfsaaw8nhdmmm15ivfa6"; + sha256 = "sha256-JTm8ht2Ubn34uQLR0yjUjXSdDQggWfYUlS0T628OUoI="; }; checkInputs = [ pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/calmjs-parse/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/calmjs-parse/default.nix new file mode 100644 index 0000000000..33cf052a44 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/calmjs-parse/default.nix @@ -0,0 +1,49 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, setuptools +, ply +, python +}: + +buildPythonPackage rec { + pname = "calmjs-parse"; + version = "1.2.5"; + + src = fetchFromGitHub { + owner = "calmjs"; + repo = "calmjs.parse"; + rev = version; + sha256 = "0ypfbas33k1706p6w1bf9gnrv38z8fa4qci1iaks80dp58g8sv4r"; + }; + + propagatedBuildInputs = [ + setuptools + ply + ]; + + checkPhase = '' + runHook preCheck + + ${python.interpreter} -m unittest calmjs.parse.tests.make_suite + + runHook postCheck + ''; + + pythonImportsCheck = [ + "calmjs.parse" + "calmjs.parse.asttypes" + "calmjs.parse.parsers" + "calmjs.parse.rules" + "calmjs.parse.sourcemap" + "calmjs.parse.unparsers.es5" + "calmjs.parse.walkers" + ]; + + meta = with lib; { + description = "Various parsers for ECMA standards"; + homepage = "https://github.com/calmjs/calmjs.parse"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/carbon/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/carbon/default.nix index b651a654d5..acc3aa144e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/carbon/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/carbon/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "carbon"; - version = "1.1.7"; + version = "1.1.8"; src = fetchPypi { inherit pname version; - sha256 = "08ndphpcbdx2ab4f5jsn2y4l5p55h9wscbg7clhbyyh03r5hianr"; + sha256 = "95918c4b14e1c525d9499554d5e03b349f87e0c2bc17ec5c64d18679a30b69f1"; }; # Carbon-s default installation is /opt/graphite. This env variable ensures diff --git a/third_party/nixpkgs/pkgs/development/python-modules/casbin/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/casbin/default.nix index ea6e2ed079..3f2b26e9c5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/casbin/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/casbin/default.nix @@ -8,7 +8,7 @@ buildPythonPackage rec { pname = "casbin"; - version = "0.19.1"; + version = "0.20.0"; disabled = isPy27; @@ -16,7 +16,7 @@ buildPythonPackage rec { owner = pname; repo = "pycasbin"; rev = "v${version}"; - sha256 = "0fkkz5k3h4pkxacrbacamnh4yfghxgajdzzmdlck7i4v5x06vz8f"; + sha256 = "1j7kd4rvf4myg4x4sm4njlhzkxm2m3cva9wmp9vx0nnpfdlyb67f"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cbor2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cbor2/default.nix index 534ba3c9af..7f417acd36 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cbor2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cbor2/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "cbor2"; - version = "5.2.0"; + version = "5.4.0"; src = fetchPypi { inherit pname version; - sha256 = "a33aa2e5534fd74401ac95686886e655e3b2ce6383b3f958199b6e70a87c94bf"; + sha256 = "a7926f7244b08c413f1a4fa71a81aa256771c75bdf1a4fd77308547a2d63dd48"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/celery/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/celery/default.nix index f0fe81f85e..480f7acb3d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/celery/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/celery/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "celery"; - version = "5.0.5"; + version = "5.1.1"; src = fetchPypi { inherit pname version; - sha256 = "f4efebe6f8629b0da2b8e529424de376494f5b7a743c321c8a2ddc2b1414921c"; + sha256 = "54436cd97b031bf2e08064223240e2a83d601d9414bcb1b702f94c6c33c29485"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cerberus/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cerberus/default.nix index cdf6519d32..7686b91927 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cerberus/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cerberus/default.nix @@ -1,20 +1,38 @@ -{ lib, buildPythonPackage, fetchPypi, pytestrunner, pytest }: +{ lib +, buildPythonPackage +, fetchFromGitHub +, pytestCheckHook +}: buildPythonPackage rec { pname = "Cerberus"; - version = "1.3.2"; + version = "1.3.4"; - src = fetchPypi { - inherit pname version; - sha256 = "12cm547hpypqd7bwcl4wr4w6varibc1dagzicg5qbp86yaa6cbih"; + src = fetchFromGitHub { + owner = "pyeve"; + repo = "cerberus"; + rev = version; + sha256 = "03kj15cf1pbd11mxsik96m5w1m6p0fbdc4ia5ihzmq8rz28razpq"; }; - checkInputs = [ pytestrunner pytest ]; + checkInputs = [ + pytestCheckHook + ]; - checkPhase = '' - pytest -k 'not nested_oneofs' + preCheck = '' + export TESTDIR=$(mktemp -d) + cp -R ./cerberus/tests $TESTDIR + pushd $TESTDIR ''; + postCheck = '' + popd + ''; + + pythonImportsCheck = [ + "cerberus" + ]; + meta = with lib; { homepage = "http://python-cerberus.org/"; description = "Lightweight, extensible schema and data validation tool for Python dictionaries"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/certbot/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/certbot/default.nix index 12e541d900..0f6b5fa285 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/certbot/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/certbot/default.nix @@ -9,13 +9,13 @@ buildPythonPackage rec { pname = "certbot"; - version = "1.15.0"; + version = "1.16.0"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "sha256-Z5ZIA0ib+N7La6Z0Taf6DovCF6fXnEDppPQt6Vgwl0c="; + sha256 = "0jdq6pvq7af2x483857qyp1qvqs4yb4nqcv66qi70glmbanhlxd4"; }; sourceRoot = "source/${pname}"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/certifi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/certifi/default.nix index eac32816ca..e21719245c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/certifi/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/certifi/default.nix @@ -1,25 +1,33 @@ { lib -, fetchPypi , buildPythonPackage +, isPy27 +, fetchFromGitHub +, pytestCheckHook }: buildPythonPackage rec { pname = "certifi"; - version = "2020.12.5"; + version = "2021.05.30"; - src = fetchPypi { - inherit pname version; - sha256 = "177mdbw0livdjvp17sz6wsfrc32838m9y59v871gpgv2888raj8s"; + disabled = isPy27; + + src = fetchFromGitHub { + owner = pname; + repo = "python-certifi"; + rev = version; + sha256 = "1i4ljsc47iac6kl1w4w6x0qia08s9z394z9lbyzc05pm7y8a3cmj"; }; + checkInputs = [ + pytestCheckHook + ]; + pythonImportsCheck = [ "certifi" ]; - dontUseSetuptoolsCheck = true; - - meta = { + meta = with lib; { homepage = "https://certifi.io/"; description = "Python package for providing Mozilla's CA Bundle"; - license = lib.licenses.isc; - maintainers = with lib.maintainers; [ koral ]; + license = licenses.isc; + maintainers = with maintainers; [ koral ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cfgv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cfgv/default.nix index ab9a97729a..306019b54b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cfgv/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cfgv/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "cfgv"; - version = "3.2.0"; + version = "3.3.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "cf22deb93d4bcf92f345a5c3cd39d3d41d6340adc60c78bbbd6588c384fda6a1"; + sha256 = "9e600479b3b99e8af981ecdfc80a0296104ee610cab48a5ae4ffd0b668650eb1"; }; propagatedBuildInputs = [ six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cfn-lint/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cfn-lint/default.nix index a5f2290899..dcfc6d8eca 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cfn-lint/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cfn-lint/default.nix @@ -21,13 +21,13 @@ buildPythonPackage rec { pname = "cfn-lint"; - version = "0.48.0"; + version = "0.51.0"; src = fetchFromGitHub { owner = "aws-cloudformation"; repo = "cfn-python-lint"; rev = "v${version}"; - sha256 = "03j5w9cyvpbxh634jd2dhkgfs3c2hmgqh77w664855lgy2ph9zll"; + sha256 = "1027s243sik25c6sqw6gla7k7vl3jdicrik5zdsa8pafxh2baja4"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cftime/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cftime/default.nix index 1f52c04e9a..bec5f03cd8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cftime/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cftime/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "cftime"; - version = "1.4.1"; + version = "1.5.0"; src = fetchPypi { inherit pname version; - sha256 = "7c55540bc164746c3c4f86a07c9c7b9ed4dfb0b0d988348ec63cec065c58766d"; + sha256 = "b644bcb53346b6f4fe2fcc9f3b574740a2097637492dcca29632c817e0604f29"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/chainer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/chainer/default.nix index 9dd656efa8..1ccce2caee 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/chainer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/chainer/default.nix @@ -5,7 +5,7 @@ buildPythonPackage rec { pname = "chainer"; - version = "7.7.0"; + version = "7.8.0"; disabled = !isPy3k; # python2.7 abandoned upstream # no tests in Pypi tarball @@ -13,7 +13,7 @@ buildPythonPackage rec { owner = "chainer"; repo = "chainer"; rev = "v${version}"; - sha256 = "0m97k5bv4pcp5rvbczvrr2vxddwzw2h42cm021f5y779jx5ghclh"; + sha256 = "1zfj3pk54gzxd4nid0qjx4kw1wdngwscvn4hk4cijxvwqi4a5zxj"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/chalice/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/chalice/default.nix index 70aa31a0d8..d93737d8ad 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/chalice/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/chalice/default.nix @@ -23,11 +23,11 @@ buildPythonPackage rec { pname = "chalice"; - version = "1.22.3"; + version = "1.23.0"; src = fetchPypi { inherit pname version; - sha256 = "5a84a73c4a8d8b22bb64e06ff99060d7f222097db4237e58749dcad5165f082d"; + sha256 = "8e3b26f8ec15197d8c04cd1edb0d692a490cb5ec179560183a403de63f21c1d7"; }; checkInputs = [ watchdog pytest hypothesis mock ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cheetah3/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cheetah3/default.nix index 5efb262908..01a6948e3c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cheetah3/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cheetah3/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "Cheetah3"; - version = "3.2.6.post1"; + version = "3.2.6.post2"; src = fetchPypi { inherit pname version; - sha256 = "58b5d84e5fbff6cf8e117414b3ea49ef51654c02ee887d155113c5b91d761967"; + sha256 = "63157d7a00a273b59676b5be5aa817c75c37efc88478231f1a160f4cfb7f7878"; }; doCheck = false; # Circular dependency diff --git a/third_party/nixpkgs/pkgs/development/python-modules/chiapos/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/chiapos/default.nix index 1faf5a94f8..e0a86f499a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/chiapos/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/chiapos/default.nix @@ -13,12 +13,12 @@ buildPythonPackage rec { pname = "chiapos"; - version = "1.0.1"; + version = "1.0.2"; disabled = pythonOlder "3.7"; src = fetchPypi { inherit pname version; - hash = "sha256-kJx57EtwPBrGMpjnSzeYYhWqc/g1N1Bg8slW5oZKjg8="; + sha256 = "09mwj9m9rcvcb3zn6v2xykgd4a9lpwl6c86nwl8d1iqr82gb5hb5"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/citeproc-py/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/citeproc-py/default.nix index bd1ae0c563..b404fa4a5c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/citeproc-py/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/citeproc-py/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "citeproc-py"; - version = "0.5.1"; + version = "0.6.0"; src = fetchPypi { inherit pname version; - sha256 = "00aaff50jy4j0nakdzq9258z1gzrac9baarli2ymgspj88jg5968"; + sha256 = "d9e3a224f936fe2e5033b5d9ffdacab769cedb61d96c4e0cf2f0b488f1d24b4e"; }; buildInputs = [ rnc2rng ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/claripy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/claripy/default.nix index 4866d30281..03be293a56 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/claripy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/claripy/default.nix @@ -13,14 +13,14 @@ buildPythonPackage rec { pname = "claripy"; - version = "9.0.7833"; + version = "9.0.8021"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "angr"; repo = pname; rev = "v${version}"; - sha256 = "sha256-C+YjpnMpz96v9QUkcdlhGl83V4UHnWAKZV2eR+vZX3c="; + sha256 = "sha256-btV6J5r4ogb4yC0G3lyXXkCTnx55nfBkWFH1wgiWtjs="; }; # Use upstream z3 implementation diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cle/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cle/default.nix index cb9daa66b0..bb99365e33 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cle/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cle/default.nix @@ -15,7 +15,7 @@ let # The binaries are following the argr projects release cycle - version = "9.0.7833"; + version = "9.0.8021"; # Binary files from https://github.com/angr/binaries (only used for testing and only here) binaries = fetchFromGitHub { @@ -35,7 +35,7 @@ buildPythonPackage rec { owner = "angr"; repo = pname; rev = "v${version}"; - sha256 = "sha256-P8bz50OgJifGWbWRyGXEB3FRfJHG1m9RgMatKA/XQLc="; + sha256 = "sha256-pgOeNAzAq2x7MEnheV6txmXISFY/0sWw4cVzs51k4eM="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/click-default-group/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/click-default-group/default.nix index 58da038faa..3ed81e598d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/click-default-group/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/click-default-group/default.nix @@ -1,4 +1,10 @@ -{ lib, buildPythonPackage, fetchFromGitHub, click, pytest }: +{ lib +, buildPythonPackage +, fetchFromGitHub +, fetchpatch +, click +, pytestCheckHook +}: buildPythonPackage rec { pname = "click-default-group"; @@ -12,9 +18,19 @@ buildPythonPackage rec { sha256 = "0nk39lmkn208w8kvq6f4h3a6qzxrrvxixahpips6ik3zflbkss86"; }; + patches = [ + # make tests compatible with click 8 + (fetchpatch { + url = "https://github.com/click-contrib/click-default-group/commit/9415c77d05cf7d16876e7d70a49a41a6189983b4.patch"; + sha256 = "1czzma8nmwyxhwhnr8rfw5bjw6d46b3s5r5bfb8ly3sjwqjlwhw2"; + }) + ]; + propagatedBuildInputs = [ click ]; - checkInputs = [ pytest ]; + checkInputs = [ pytestCheckHook ]; + + pythonImportsCheck = [ "click_default_group" ]; meta = with lib; { homepage = "https://github.com/click-contrib/click-default-group"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/click-repl/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/click-repl/default.nix index ee8773999f..ec4cffe0d3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/click-repl/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/click-repl/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "click-repl"; - version = "0.1.6"; + version = "0.2.0"; src = fetchPypi { inherit pname version; - sha256 = "1mcmz95595nrp4r58spy1ac993db26hk4q97isghbmn4md99vwmr"; + sha256 = "cd12f68d745bf6151210790540b4cb064c7b13e571bc64b6957d98d120dacfd8"; }; propagatedBuildInputs = [ click prompt_toolkit ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/click-threading/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/click-threading/default.nix index 1579a6a6a8..529ee08e4f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/click-threading/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/click-threading/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "click-threading"; - version = "0.4.4"; + version = "0.5.0"; src = fetchPypi { inherit pname version; - sha256 = "b2b0fada5bf184b56afaccc99d0d2548d8ab07feb2e95e29e490f6b99c605de7"; + sha256 = "sha256-rc/mI8AqWVwQfDFAcvZ6Inj+TrQLcsDRoskDzHivNDk="; }; checkInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/click/7.nix b/third_party/nixpkgs/pkgs/development/python-modules/click/7.nix new file mode 100644 index 0000000000..fcbd4d0981 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/click/7.nix @@ -0,0 +1,28 @@ +{ lib, buildPythonPackage, fetchPypi, locale, pytestCheckHook }: + +buildPythonPackage rec { + pname = "click"; + version = "7.1.2"; + + src = fetchPypi { + inherit pname version; + sha256 = "d2b5255c7c6349bc1bd1e59e08cd12acbbd63ce649f2588755783aa94dfb6b1a"; + }; + + postPatch = '' + substituteInPlace src/click/_unicodefun.py \ + --replace "'locale'" "'${locale}/bin/locale'" + ''; + + checkInputs = [ pytestCheckHook ]; + + meta = with lib; { + homepage = "https://click.palletsprojects.com/"; + description = "Create beautiful command line interfaces in Python"; + longDescription = '' + A Python package for creating beautiful command line interfaces in a + composable way, with as little code as necessary. + ''; + license = licenses.bsd3; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/click/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/click/default.nix index fcbd4d0981..d20322e3b8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/click/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/click/default.nix @@ -1,12 +1,19 @@ -{ lib, buildPythonPackage, fetchPypi, locale, pytestCheckHook }: +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, importlib-metadata +, locale +, pytestCheckHook +}: buildPythonPackage rec { pname = "click"; - version = "7.1.2"; + version = "8.0.1"; src = fetchPypi { inherit pname version; - sha256 = "d2b5255c7c6349bc1bd1e59e08cd12acbbd63ce649f2588755783aa94dfb6b1a"; + sha256 = "0ymdyf37acq4qxh038q0xx44qgj6y2kf0jd0ivvix6qij88w214c"; }; postPatch = '' @@ -14,7 +21,13 @@ buildPythonPackage rec { --replace "'locale'" "'${locale}/bin/locale'" ''; - checkInputs = [ pytestCheckHook ]; + propagatedBuildInputs = lib.optionals (pythonOlder "3.8") [ + importlib-metadata + ]; + + checkInputs = [ + pytestCheckHook + ]; meta = with lib; { homepage = "https://click.palletsprojects.com/"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cliff/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cliff/default.nix index 54cc753417..bb856736d9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cliff/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cliff/default.nix @@ -16,11 +16,11 @@ buildPythonPackage rec { pname = "cliff"; - version = "3.7.0"; + version = "3.8.0"; src = fetchPypi { inherit pname version; - sha256 = "389c81960de13f05daf1cbd546f33199e86c518ba4266c79ec7a153a280980ea"; + sha256 = "8dd215d0a84c9a3ab2fa2aa700849f4e7b786639f66caa0ad4108c85dca95a7c"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cligj/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cligj/default.nix index b44f4e0ec1..7806da7fb1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cligj/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cligj/default.nix @@ -4,13 +4,13 @@ buildPythonPackage rec { pname = "cligj"; - version = "0.5.0"; + version = "0.7.2"; src = fetchFromGitHub { owner = "mapbox"; repo = "cligj"; rev = version; - sha256 = "13vlibbn86dhh6iy8k831vsa249746jnk419wcr9vvr3pqxml6g2"; + sha256 = "sha256-0f9+I6ozX93Vn0l7+WR0mpddDZymJQ3+Krovt6co22Y="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cock/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cock/default.nix index c11646decd..683234b887 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cock/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cock/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "cock"; - version = "0.8.0"; + version = "0.9.0"; src = fetchPypi { inherit pname version; - sha256 = "1gwaklvwlyvhz2c07hdmhbnqqmpybssxzzr0399dpjk7dgdqgam3"; + sha256 = "0d9021c2d9ce0dbf495a3c5ef960a9996a0681bb96ff6099f37302a3813a184e"; }; propagatedBuildInputs = [ click sortedcontainers pyyaml ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/codespell/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/codespell/default.nix index 7427d391c6..d9b64cb839 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/codespell/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/codespell/default.nix @@ -2,13 +2,13 @@ buildPythonApplication rec { pname = "codespell"; - version = "2.0.0"; + version = "2.1.0"; src = fetchFromGitHub { owner = "codespell-project"; repo = "codespell"; rev = "v${version}"; - sha256 = "187g26s3wzjmvdx9vjabbnajpbg0s9klixyv6baymmgz9lrcv4ln"; + sha256 = "sha256-BhYVztSr2MalILEcOcvMl07CObYa73o3kW8S/idqAO8="; }; checkInputs = [ aspell-python chardet pytestCheckHook pytest-cov pytest-dependency ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/colorthief/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/colorthief/default.nix new file mode 100644 index 0000000000..cdb37df3e3 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/colorthief/default.nix @@ -0,0 +1,33 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pillow +}: + +buildPythonPackage rec { + pname = "colorthief"; + version = "0.2.1"; + + src = fetchFromGitHub { + owner = "fengsp"; + repo = "color-thief-py"; + rev = version; + sha256 = "0lzpflal1iqbj4k7hayss5z024qf2sn8c3wxw03a0mgxg06ca2hm"; + }; + + propagatedBuildInputs = [ + pillow + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "colorthief" ]; + + meta = with lib; { + description = "Python module for grabbing the color palette from an image"; + homepage = "https://github.com/fengsp/color-thief-py"; + license = licenses.bsd3; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/commoncode/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/commoncode/default.nix index dfb82cccea..16d529b17f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/commoncode/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/commoncode/default.nix @@ -14,11 +14,11 @@ }: buildPythonPackage rec { pname = "commoncode"; - version = "21.1.21"; + version = "21.6.11"; src = fetchPypi { inherit pname version; - sha256 = "6e2daa34fac2d91307b23d9df5f01a6168fdffb12bf5d161bd6776bade29b479"; + sha256 = "d6c8c985746a541913d5bb534c770f2422e5b4ac7a4ef765abc05c287a40ff4b"; }; dontConfigure = true; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/configargparse/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/configargparse/default.nix index 5646bca047..45ec7364a5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/configargparse/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/configargparse/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "configargparse"; - version = "1.4"; + version = "1.4.1"; src = fetchFromGitHub { owner = "bw2"; repo = "ConfigArgParse"; rev = "v${version}"; - sha256 = "0x6ar7d8qhr7gb1s8asbhqymg9jd635h7cyczqrbmvm8689zhj1d"; + sha256 = "sha256-hzhjrdrXxjksvbHlTnQVsT350g0yuG1F21fElv6bLSA="; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/confluent-kafka/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/confluent-kafka/default.nix index d07930b5e5..d9e7ee9372 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/confluent-kafka/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/confluent-kafka/default.nix @@ -1,12 +1,12 @@ { lib, buildPythonPackage, fetchPypi, isPy3k, rdkafka, requests, avro3k, avro ? null, futures ? null, enum34 ? null }: buildPythonPackage rec { - version = "1.6.0"; + version = "1.7.0"; pname = "confluent-kafka"; src = fetchPypi { inherit pname version; - sha256 = "8a9caabdb02e87cd65c7f10f689ba3f1a15f8774de455e96fa5fc56eecfee63c"; + sha256 = "80e01b4791513c27eded8517af847530dfdf04c43d99ff132ed9c3085933b75b"; }; buildInputs = [ rdkafka requests ] ++ (if isPy3k then [ avro3k ] else [ enum34 avro futures ]) ; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/connection-pool/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/connection-pool/default.nix new file mode 100644 index 0000000000..26e958f095 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/connection-pool/default.nix @@ -0,0 +1,27 @@ +{ lib +, buildPythonPackage +, fetchPypi +, isPy3k +}: + +buildPythonPackage rec { + pname = "connection-pool"; + version = "0.0.3"; + disabled = !isPy3k; + + src = fetchPypi { + pname = "connection_pool"; + inherit version; + sha256 = "bf429e7aef65921c69b4ed48f3d48d3eac1383b05d2df91884705842d974d0dc"; + }; + + doCheck = false; # no tests + pythonImportsCheck = [ "connection_pool" ]; + + meta = with lib; { + description = "Thread-safe connection pool"; + homepage = "https://github.com/zhouyl/ConnectionPool"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ veprbl ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/construct/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/construct/default.nix index 3a3a3d3271..4ad78ddad3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/construct/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/construct/default.nix @@ -5,7 +5,7 @@ buildPythonPackage rec { pname = "construct"; - version = "2.10.63"; + version = "2.10.67"; disabled = pythonOlder "3.6"; @@ -14,7 +14,7 @@ buildPythonPackage rec { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "0dnj815qdxrn0q6bpwsmkca2jy02gjy6d3amqg4y6gha1kc1mymv"; + sha256 = "1nciwim745qk41l1ck4chx3vxpfr6cq4k3a4i7vfnnrd3s6szzsw"; }; # not an explicit dependency, but it's imported by an entrypoint diff --git a/third_party/nixpkgs/pkgs/development/python-modules/coqpit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/coqpit/default.nix index c4df114e24..aa65432c15 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/coqpit/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/coqpit/default.nix @@ -6,14 +6,14 @@ buildPythonPackage rec { pname = "coqpit"; - version = "0.0.6.6"; + version = "0.0.10"; format = "setuptools"; src = fetchFromGitHub { owner = "coqui-ai"; repo = pname; rev = "v${version}"; - sha256 = "0wb5wf84i5h4ycm732kn4316v7schhm91s2rrklfw9sny5dqmdnh"; + sha256 = "1gcj5sffcmlvhhk6wbvmxppjpckb90q1avc07jbnb1vvrb2h9lr0"; }; checkInputs = [ @@ -32,6 +32,6 @@ buildPythonPackage rec { ''; homepage = "https://github.com/coqui-ai/coqpit"; license = licenses.mit; - maintainers = with maintainers; [ hexa mic92 ]; + maintainers = teams.tts.members; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cornice/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cornice/default.nix index ba6df4fd24..5a576f3e6c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cornice/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cornice/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "cornice"; - version = "5.1.0"; + version = "5.2.0"; src = fetchPypi { inherit pname version; - sha256 = "c81cd9429759c0de475f580bbff92d5646cfc5f43e8aa24492037e2e90677ee6"; + sha256 = "50f86a5e9fb73d664d20e8dd0bdc3ce419145eb17813591a5a40e8a9d567b9c5"; }; propagatedBuildInputs = [ pyramid simplejson six venusian ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/coveralls/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/coveralls/default.nix index 46002fae4f..5d5b07ffd0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/coveralls/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/coveralls/default.nix @@ -16,13 +16,13 @@ buildPythonPackage rec { pname = "coveralls"; - version = "3.0.1"; + version = "3.1.0"; disabled = isPy27; # wanted by tests src = fetchPypi { inherit pname version; - sha256 = "cbb942ae5ef3d2b55388cb5b43e93a269544911535f1e750e1c656aef019ce60"; + sha256 = "9b3236e086627340bf2c95f89f757d093cbed43d17179d3f4fb568c347e7d29a"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cucumber-tag-expressions/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cucumber-tag-expressions/default.nix index 789a58bb6a..d90e53ac36 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cucumber-tag-expressions/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cucumber-tag-expressions/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "cucumber-tag-expressions"; - version = "3.0.0"; + version = "3.0.1"; src = fetchPypi { inherit pname version; - sha256 = "0kb8dq458sflwl2agb2v9hp04qwygslrhdps819vq27wc44jabxw"; + sha256 = "71823468f567726332b87f40530b27fc83b35daea6514f5cbb03f0533d96e5be"; }; checkInputs = [ pytest pytest-html ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cupy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cupy/default.nix index f5d262f0b8..6a072ab8e1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cupy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cupy/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "cupy"; - version = "8.5.0"; + version = "8.6.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "fb3f8d3b3454beb249b9880502a45fe493c5a44efacc4c72914cbe1a5dbdf803"; + sha256 = "f3ed02ba18e38b4f3ed2c324fa08967e6714f59357ccb0b28badd9572e77500b"; }; preConfigure = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cx_freeze/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cx_freeze/default.nix index c3c3618033..b6edb2ced1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cx_freeze/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cx_freeze/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "cx_Freeze"; - version = "6.5.3"; + version = "6.6"; src = fetchPypi { inherit pname version; - sha256 = "e0d03cabcdf9b9c21354807ed9f06fa9481a8fd5a0838968a830f01a70820ff1"; + sha256 = "c4af8ad3f7e7d71e291c1dec5d0fb26bbe92df834b098ed35434c901fbd6762f"; }; disabled = pythonOlder "3.5"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/cx_oracle/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/cx_oracle/default.nix index c81443e099..a5606ac3dd 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/cx_oracle/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/cx_oracle/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "cx_Oracle"; - version = "8.1.0"; + version = "8.2.1"; buildInputs = [ odpic ]; src = fetchPypi { inherit pname version; - sha256 = "e1698c5522ee1355e552b30bfa0a58e6e772475b882c5d69d158bd7e6aed45de"; + sha256 = "12e7e913a7a10fd8caafb9855e6703a601b7dd5cc596fcd489d0ac9529608b6c"; }; preConfigure = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dash-core-components/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dash-core-components/default.nix index 2782342c1b..8802f0f0e7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dash-core-components/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dash-core-components/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "dash_core_components"; - version = "1.15.0"; + version = "1.16.0"; src = fetchPypi { inherit pname version; - sha256 = "b61cb37322de91b4feb0d4d823694cbba8686f6459db774b53d553135350c71e"; + sha256 = "e8cdfaf3580577670bb2d1c3168efa06f5a7b439fbe5527cfaefa3e32394542f"; }; # No tests in archive diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dash-html-components/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dash-html-components/default.nix index 3d29054467..28faf24481 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dash-html-components/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dash-html-components/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "dash_html_components"; - version = "1.1.2"; + version = "1.1.3"; src = fetchPypi { inherit pname version; - sha256 = "83eaa39667b7c3e6cbefa360743e6e536d913269ea15db14308ad022c78bc301"; + sha256 = "88adb77a674d5d7d0835d71c469f6e7b4aa692f9673808a474d244b71863c58a"; }; # No tests in archive diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dash-renderer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dash-renderer/default.nix index 5c8f524e42..bc489ff8f9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dash-renderer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dash-renderer/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "dash_renderer"; - version = "1.9.0"; + version = "1.9.1"; src = fetchPypi { inherit pname version; - sha256 = "3c5519a781beb2261ee73b2d193bef6f212697636f204acd7d58cd986ba88e30"; + sha256 = "73a69e3d145880e68e42723ad10182251d92b44f3efe92b8763145cfd2158e7e"; }; # No tests in archive diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dash-table/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dash-table/default.nix index 8374d8694a..31be5e6853 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dash-table/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dash-table/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "dash_table"; - version = "4.11.2"; + version = "4.11.3"; src = fetchPypi { inherit pname version; - sha256 = "90fbdd12eaaf657aa80d429263de4bbeef982649eb5981ebeb2410d67c1d20eb"; + sha256 = "0a4f22a5cf5120882a252a3348fc15ef45a1b75bf900934783e338aceac52f56"; }; # No tests in archive diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dash/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dash/default.nix index 89ff61f6c5..c9b259b073 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dash/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dash/default.nix @@ -16,13 +16,13 @@ buildPythonPackage rec { pname = "dash"; - version = "1.19.0"; + version = "1.20.0"; src = fetchFromGitHub { owner = "plotly"; repo = pname; rev = "v${version}"; - sha256 = "067ipkp186h26j7whfid8hjf6cwjmw2b5jp6fvvg280j7q9bjsa9"; + sha256 = "1205xwi0w33g3c8gcba50fjj38dzgn7nhfk5w186kd6dwmvz02yg"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dask-ml/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dask-ml/default.nix index ff1b145ee8..62f2a30507 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dask-ml/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dask-ml/default.nix @@ -17,13 +17,13 @@ }: buildPythonPackage rec { - version = "1.8.0"; + version = "1.9.0"; pname = "dask-ml"; disabled = pythonOlder "3.6"; # >= 3.6 src = fetchPypi { inherit pname version; - sha256 = "8fc4ac3ec1915e382fb8cae9ff1ec9b5ac1bee0b6f4c6975d6e6cb7191a4a815"; + sha256 = "2f376a7114133b484a6d393f62298473116fc49c79ec7d50d5b031d752f54307"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dask/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dask/default.nix index 55ba3ad6ba..b51ac1701a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dask/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dask/default.nix @@ -2,7 +2,6 @@ , stdenv , bokeh , buildPythonPackage -, fetchpatch , fetchFromGitHub , fsspec , pytestCheckHook @@ -21,14 +20,14 @@ buildPythonPackage rec { pname = "dask"; - version = "2021.03.0"; + version = "2021.06.1"; disabled = pythonOlder "3.5"; src = fetchFromGitHub { owner = "dask"; repo = pname; rev = version; - sha256 = "LACv7lWpQULQknNGX/9vH9ckLsypbqKDGnsNBgKT1eI="; + sha256 = "sha256-wrUqLSmlKhd0NSjWBwbow8aX53ZBTgl2n4lEmvxC3bs="; }; propagatedBuildInputs = [ @@ -54,16 +53,6 @@ buildPythonPackage rec { dontUseSetuptoolsCheck = true; - patches = [ - # dask dataframe cannot be imported in sandboxed builds - # See https://github.com/dask/dask/pull/7601 - (fetchpatch { - url = "https://github.com/dask/dask/commit/9ce5b0d258cecb3ef38fd844135ad1f7ac3cea5f.patch"; - sha256 = "sha256-1EVRYwAdTSEEH9jp+UOnrijzezZN3iYR6q6ieYJM3kY="; - name = "fix-dask-dataframe-imports-in-sandbox.patch"; - }) - ]; - postPatch = '' # versioneer hack to set version of github package echo "def get_versions(): return {'dirty': False, 'error': None, 'full-revisionid': None, 'version': '${version}'}" > dask/_version.py @@ -82,6 +71,12 @@ buildPythonPackage rec { # this test requires features of python3Packages.psutil that are # blocked in sandboxed-builds "test_auto_blocksize_csv" + ] ++ [ + # A deprecation warning from newer sqlalchemy versions makes these tests + # to fail https://github.com/dask/dask/issues/7406 + "test_sql" + # Test interrupt fails intermittently https://github.com/dask/dask/issues/2192 + "test_interrupt" ]; __darwinAllowLocalNetworking = true; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/databases/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/databases/default.nix index 3a1da0697c..98e047836d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/databases/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/databases/default.nix @@ -1,6 +1,7 @@ { lib , buildPythonPackage , fetchFromGitHub +, fetchpatch , sqlalchemy , aiocontextvars , isPy27 @@ -23,6 +24,18 @@ buildPythonPackage rec { sha256 = "0aq88k7d9036cy6qvlfv9p2dxd6p6fic3j0az43gn6k1ardhdsgf"; }; + patches = [ + # sqlalchemy 1.4 compat, https://github.com/encode/databases/pull/299 + (fetchpatch { + url = "https://github.com/encode/databases/commit/9d6e0c024833bd41421f0798a94ef2bbf27a31d5.patch"; + sha256 = "0wz9dz6g88ifvvwlhy249cjvqpx72x99wklzcl7b23srpcvb5gv1"; + }) + (fetchpatch { + url = "https://github.com/encode/databases/commit/40c41c2b7b3fedae484ad94d81b27ce88a09c5ed.patch"; + sha256 = "0z458l3vkg4faxbnf31lszfby5d10fa9kgxxy4xxcm0py6d8a2pi"; + }) + ]; + propagatedBuildInputs = [ aiocontextvars sqlalchemy diff --git a/third_party/nixpkgs/pkgs/development/python-modules/databricks-connect/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/databricks-connect/default.nix index 17116eb130..afb8e13dc5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/databricks-connect/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/databricks-connect/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "databricks-connect"; - version = "8.1.0"; + version = "8.1.6"; src = fetchPypi { inherit pname version; - sha256 = "3726c648cc60796294356e2617acc534d2503824ccfbdff26abbea595eb83135"; + sha256 = "2d6989491a2a33853eb10500574eb62dbcb98ac691d7e98022c5f18e23ad18b2"; }; sourceRoot = "."; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dataclasses-json/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dataclasses-json/default.nix index 36430a29ef..f97217cd29 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dataclasses-json/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dataclasses-json/default.nix @@ -1,18 +1,23 @@ { lib , buildPythonPackage -, fetchPypi +, fetchFromGitHub , stringcase , typing-inspect , marshmallow-enum +, hypothesis +, mypy +, pytestCheckHook }: buildPythonPackage rec { pname = "dataclasses-json"; - version = "0.5.2"; + version = "0.5.4"; - src = fetchPypi { - inherit pname version; - sha256 = "56ec931959ede74b5dedf65cf20772e6a79764d20c404794cce0111c88c085ff"; + src = fetchFromGitHub { + owner = "lidatong"; + repo = pname; + rev = "v${version}"; + sha256 = "193xklf1xrsin7fr24yqx5ckr4m5s9v1bdyr00qr51j74hiy8qsv"; }; propagatedBuildInputs = [ @@ -21,6 +26,19 @@ buildPythonPackage rec { marshmallow-enum ]; + checkInputs = [ + hypothesis + mypy + pytestCheckHook + ]; + + disabledTests = [ + # AssertionError: Type annotations check failed + "test_type_hints" + ]; + + pythonImportsCheck = [ "dataclasses_json" ]; + meta = with lib; { description = "Simple API for encoding and decoding dataclasses to and from JSON"; homepage = "https://github.com/lidatong/dataclasses-json"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/datadog/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/datadog/default.nix index ad3f66b5d6..fbe3316e01 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/datadog/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/datadog/default.nix @@ -17,11 +17,11 @@ buildPythonPackage rec { pname = "datadog"; - version = "0.40.1"; + version = "0.41.0"; src = fetchPypi { inherit pname version; - sha256 = "438c1dde5462e68c5c792b7b4a1d87a0ddd970af3db31b3cf15980eed0c44311"; + sha256 = "sha256-PeGkO4qNX2sZ0WLsG0gtxasmNsWc9l5gWJcCMEUQpok="; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/datasette/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/datasette/default.nix index 1d919de6ee..58920b4064 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/datasette/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/datasette/default.nix @@ -5,6 +5,7 @@ , asgi-csrf , click , click-default-group +, itsdangerous , janus , jinja2 , hupper @@ -17,56 +18,62 @@ , httpx # Check Inputs , pytestCheckHook -, pytestrunner +, pytest-runner , pytest-asyncio +, pytest-timeout , aiohttp , beautifulsoup4 , asgiref , setuptools +, trustme +, pythonOlder }: buildPythonPackage rec { pname = "datasette"; - version = "0.54.1"; + version = "0.57.1"; + disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "simonw"; - repo = "datasette"; + repo = pname; rev = version; - sha256 = "sha256-Ixh56X9dI/FIJPXHXXGnFiYj3qeBmvW5L1FF7/0ofUQ="; + sha256 = "sha256-BHsf3GOganPhsDiZlRxvAsRZH/Sq+Jr+CZcc2ubce+8="; }; - nativeBuildInputs = [ pytestrunner ]; + nativeBuildInputs = [ pytest-runner ]; propagatedBuildInputs = [ aiofiles asgi-csrf + asgiref click click-default-group + httpx + hupper + itsdangerous janus jinja2 - hupper mergedeep pint pluggy python-baseconv pyyaml - uvicorn setuptools - httpx - asgiref + uvicorn ]; checkInputs = [ - pytestCheckHook - pytest-asyncio aiohttp beautifulsoup4 + pytest-asyncio + pytest-timeout + pytestCheckHook + trustme ]; postConfigure = '' substituteInPlace setup.py \ - --replace "click~=7.1.1" "click" \ --replace "click-default-group~=1.2.2" "click-default-group" \ --replace "hupper~=1.9" "hupper" \ --replace "pint~=0.9" "pint" \ @@ -75,12 +82,13 @@ buildPythonPackage rec { --replace "PyYAML~=5.3" "PyYAML" ''; - # takes 30-180 mins to run entire test suite, not worth the cpu resources, slows down reviews - # with pytest-xdist, it still takes around 10mins with 32 cores + # takes 30-180 mins to run entire test suite, not worth the CPU resources, slows down reviews + # with pytest-xdist, it still takes around 10 mins with 32 cores # just run the csv tests, as this should give some indictation of correctness pytestFlagsArray = [ "tests/test_csv.py" ]; + disabledTests = [ "facet" "_invalid_database" # checks error message when connecting to invalid database @@ -97,10 +105,9 @@ buildPythonPackage rec { ]; meta = with lib; { - description = "An instant JSON API for your SQLite databases"; - homepage = "https://github.com/simonw/datasette"; + description = "Multi-tool for exploring and publishing data"; + homepage = "https://datasette.io/"; license = licenses.asl20; maintainers = [ maintainers.costrouc ]; }; - } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/datashader/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/datashader/default.nix index d656a203b9..5738dc64e7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/datashader/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/datashader/default.nix @@ -24,11 +24,11 @@ buildPythonPackage rec { pname = "datashader"; - version = "0.12.1"; + version = "0.13.0"; src = fetchPypi { inherit pname version; - sha256 = "a135612876dc3e4b16ccb9ddb70de50519825c8c1be251b49aefa550bcf8a39a"; + sha256 = "sha256-6JscHm1QjDmXOLLa83qhAvY/xwvlPM6duQ1lSxnCVV8="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/debugpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/debugpy/default.nix index 059f2110fd..da1f25ad2c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/debugpy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/debugpy/default.nix @@ -2,6 +2,7 @@ , stdenv , buildPythonPackage , fetchFromGitHub +, fetchpatch , substituteAll , gdb , flask @@ -48,6 +49,12 @@ buildPythonPackage rec { # To avoid this issue, debugpy should be installed using python.withPackages: # python.withPackages (ps: with ps; [ debugpy ]) ./fix-test-pythonpath.patch + + # Fix tests with flask>=2.0 + (fetchpatch { + url = "https://github.com/microsoft/debugpy/commit/0a7f2cd67dda27ea4d38389b49a4e2a1899b834e.patch"; + sha256 = "1g070fn07n7jj01jaf5s570zn70akf6klkamigs3ix11gh736rpn"; + }) ]; # Remove pre-compiled "attach" libraries and recompile for host platform diff --git a/third_party/nixpkgs/pkgs/development/python-modules/deezer-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/deezer-python/default.nix index cff9a66669..cd24ae0fd3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/deezer-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/deezer-python/default.nix @@ -12,7 +12,7 @@ buildPythonPackage rec { pname = "deezer-python"; - version = "2.2.2"; + version = "2.2.4"; disabled = pythonOlder "3.6"; format = "pyproject"; @@ -20,7 +20,7 @@ buildPythonPackage rec { owner = "browniebroke"; repo = pname; rev = "v${version}"; - sha256 = "1l8l4lxlqsj921gk1mxcilp11jx31addiyd9pk604aldgqma709y"; + sha256 = "11gqmyf350256gbppak2qv20lg2bmszand4kmks93wphq5yp2iiy"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/defusedxml/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/defusedxml/default.nix index c39ca96bfe..6ac1bab084 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/defusedxml/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/defusedxml/default.nix @@ -1,14 +1,12 @@ { lib , buildPythonPackage , fetchPypi -, pythonOlder , python }: buildPythonPackage rec { pname = "defusedxml"; version = "0.7.1"; - disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/desktop-notifier/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/desktop-notifier/default.nix index ab4189c8f5..29ddb16f27 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/desktop-notifier/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/desktop-notifier/default.nix @@ -10,11 +10,12 @@ buildPythonPackage rec { pname = "desktop-notifier"; - version = "3.2.3"; + version = "3.3.0"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "cf359450efc0944ac4db3106e50faa9d49dcef072307c3531e6af2c8a10cd523"; + sha256 = "sha256-ROSZorkA2wAp2Ubh3B3KWIUxM/4r7cv/1aSJqeKnPqg="; }; propagatedBuildInputs = [ @@ -34,5 +35,6 @@ buildPythonPackage rec { description = "A Python library for cross-platform desktop notifications"; license = licenses.mit; maintainers = with maintainers; [ sfrijters ]; + platforms = platforms.linux; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/devolo-home-control-api/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/devolo-home-control-api/default.nix index 90e3428815..44a0165d6f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/devolo-home-control-api/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/devolo-home-control-api/default.nix @@ -6,7 +6,7 @@ , pytestCheckHook , pythonOlder , requests -, websocket_client +, websocket-client , zeroconf }: @@ -25,7 +25,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ requests zeroconf - websocket_client + websocket-client ]; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/diagrams/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/diagrams/default.nix index 37e23d730e..d34fc3b899 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/diagrams/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/diagrams/default.nix @@ -14,7 +14,7 @@ buildPythonPackage rec { pname = "diagrams"; - version = "0.19.1"; + version = "0.20.0"; format = "pyproject"; disabled = pythonOlder "3.6"; @@ -22,9 +22,14 @@ buildPythonPackage rec { owner = "mingrammer"; repo = pname; rev = "v${version}"; - sha256 = "0qvk0cp3026n5jmwp9z7m70b6pws0h6a7slxr23glg18baxr44d4"; + sha256 = "1lcqsy3bvlnlnakjysp8qjhy26bhkp1izi5dvzq2fpsffgxk4si4"; }; + postPatch = '' + substituteInPlace pyproject.toml \ + --replace 'jinja2 = "^2.10"' 'jinja2 = "*"' + ''; + preConfigure = '' patchShebangs autogen.sh ./autogen.sh diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dictpath/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dictpath/default.nix new file mode 100644 index 0000000000..2809d85958 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/dictpath/default.nix @@ -0,0 +1,34 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "dictpath"; + version = "0.1.3"; + + src = fetchFromGitHub { + owner = "p1c2u"; + repo = "dictpath"; + rev = version; + sha256 = "0314i8wky2z83a66zggc53m8qa1rjgkrznrl2ixsgiq0prcn6v16"; + }; + + postPatch = '' + sed -i "/^addopts/d" setup.cfg + ''; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "dictpath" ]; + + meta = with lib; { + description = "Object-oriented dictionary paths"; + homepage = "https://github.com/p1c2u/dictpath"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/diff_cover/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/diff_cover/default.nix index 5c340bf7ac..7eeb378ff4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/diff_cover/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/diff_cover/default.nix @@ -17,7 +17,7 @@ buildPythonPackage rec { pname = "diff_cover"; - version = "5.0.1"; + version = "5.2.0"; preCheck = '' export LC_ALL=en_US.UTF-8; @@ -25,7 +25,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "e80f7a4979b7a9d373903776588279ed2898f17729e608255c4119462c822edb"; + sha256 = "a1cd54232d2e48bd4c1eabc96cfe4a8727a9a92fd2556b52ff8f65bb8adf8768"; }; propagatedBuildInputs = [ chardet jinja2 jinja2_pluralize pygments six inflect ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/directv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/directv/default.nix new file mode 100644 index 0000000000..5f8c40c075 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/directv/default.nix @@ -0,0 +1,41 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, aiohttp +, yarl +, aresponses +, pytest-asyncio +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "directv"; + version = "0.4.0"; + + src = fetchFromGitHub { + owner = "ctalkington"; + repo = "python-directv"; + rev = version; + sha256 = "19jckf6qvl8fwi8yff1qy8c44xdz3zpi1ip1md6zl2c503qc91mk"; + }; + + propagatedBuildInputs = [ + aiohttp + yarl + ]; + + checkInputs = [ + aresponses + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "directv" ]; + + meta = with lib; { + description = "Asynchronous Python client for DirecTV (SHEF)"; + homepage = "https://github.com/ctalkington/python-directv"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/discordpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/discordpy/default.nix index 3fb5e7ae55..6de2b9f817 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/discordpy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/discordpy/default.nix @@ -10,14 +10,14 @@ buildPythonPackage rec { pname = "discord.py"; - version = "1.7.2"; + version = "1.7.3"; disabled = pythonOlder "3.8"; src = fetchFromGitHub { owner = "Rapptz"; repo = pname; rev = "v${version}"; - sha256 = "sha256-NY1/RKp8w9gAqGYXnCNhNZqR/inGMvUvxjJ1MMs62B8="; + sha256 = "sha256-eKXCzGFSzxpdZed4/4G6uJ96s5yCm6ci8K8XYR1zQlE="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/distlib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/distlib/default.nix index 12e05b58c4..002c0923c2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/distlib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/distlib/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "distlib"; - version = "0.3.1"; + version = "0.3.2"; src = fetchPypi { inherit pname version; - sha256 = "edf6116872c863e1aa9d5bb7cb5e05a022c519a4594dc703843343a9ddd9bff1"; + sha256 = "106fef6dc37dd8c0e2c0a60d3fca3e77460a48907f335fa28420463a6f799736"; extension = "zip"; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/distributed/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/distributed/default.nix index 8ce554e6f6..605e905d4a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/distributed/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/distributed/default.nix @@ -20,13 +20,13 @@ buildPythonPackage rec { pname = "distributed"; - version = "2021.3.0"; + version = "2021.6.1"; disabled = pythonOlder "3.6"; # get full repository need conftest.py to run tests src = fetchPypi { inherit pname version; - sha256 = "sha256-Qn/n4Ee7rXQTxl1X5W+k1rHPkh/SBqPSyquUv5FTw9s="; + sha256 = "sha256-Z79h/WAio5diX2myChx8HPAWe2RB4Ajw7Ybch4XUYFc="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django-anymail/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django-anymail/default.nix index 9b5c8e1d00..06dd78989f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django-anymail/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django-anymail/default.nix @@ -12,13 +12,13 @@ buildPythonPackage rec { pname = "django-anymail"; - version = "8.2"; + version = "8.4"; src = fetchFromGitHub { owner = "anymail"; repo = pname; rev = "v${version}"; - sha256 = "0zd4w707az36pp8wimlz6sfxwy9w190qp93brl78pva3rhnx5p97"; + sha256 = "08ac24hrafkk1jg3milfjky3qni1cz5qggp1rgzq9r7ina4akjma"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django-auth-ldap/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django-auth-ldap/default.nix index d89bc6023c..ed6ee01e34 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django-auth-ldap/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django-auth-ldap/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "django-auth-ldap"; - version = "2.3.0"; + version = "2.4.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "5894317122a086c9955ed366562869a81459cf6b663636b152857bb5d3a0a3b7"; + sha256 = "60fcbfc3141c99c3c49d3ccd7311a3992a231c319d94b6d2c143968f63676676"; }; propagatedBuildInputs = [ ldap django ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django-cleanup/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django-cleanup/default.nix index 83dbbc5d19..faddf56208 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django-cleanup/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django-cleanup/default.nix @@ -4,10 +4,10 @@ buildPythonPackage rec { pname = "django-cleanup"; - version = "5.1.0"; + version = "5.2.0"; src = fetchPypi { inherit pname version; - sha256 = "8976aec12a22913afb3d1fcb541b1aedde2f5ec243e4260c5ff78bb6aa75a089"; + sha256 = "909d10ff574f5ce1a40fa63bd5c94c9ed866fd7ae770994c46cdf66c3db3e846"; }; checkInputs = [ django ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django-jinja2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django-jinja2/default.nix index 13b5354e17..8f20313556 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django-jinja2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django-jinja2/default.nix @@ -4,7 +4,7 @@ buildPythonPackage rec { pname = "django-jinja"; - version = "2.7.0"; + version = "2.8.0"; meta = { description = "Simple and nonobstructive jinja2 integration with Django"; @@ -14,7 +14,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "d56ecddaa6d3caf508509aae5a979ebd8a3427477c34fcbcac14bf8389a21a12"; + sha256 = "bba30a7ea4394bccfaa9bc8620996c25ede446ab06104b51b3a16fe81232cbf2"; }; buildInputs = [ django pytz tox ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django-logentry-admin/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django-logentry-admin/default.nix index 7bba272c15..1a3998dc8c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django-logentry-admin/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django-logentry-admin/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "django-logentry-admin"; - version = "1.0.4"; + version = "1.1.0"; src = fetchFromGitHub { owner = "yprez"; repo = pname; rev = "v${version}"; - sha256 = "1ji04qklzhjb7fx6644vzikjb2196rxyi8hrwf2knsz41ndvq1l9"; + sha256 = "1bndxgvisw8kk52zfdifvly6dl4833wqilxf77pg473172yaf5gq"; }; checkInputs = [ pytest pytest-django ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django-q/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django-q/default.nix index 3d9d885daf..c9c5410416 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django-q/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django-q/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "django-q"; - version = "1.3.5"; + version = "1.3.8"; src = fetchPypi { inherit pname version; - sha256 = "8871c602e2c7e892fbedc271d5b91c4a96803b689c3ee2f15464931f99f4e32b"; + sha256 = "db30266fadd6ab9336a8824291910ff1d1c28f7bc9d6e52cdaf33cc275ae6146"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django-raster/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django-raster/default.nix index 609388a311..713e7214cf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django-raster/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django-raster/default.nix @@ -6,14 +6,14 @@ if lib.versionOlder django.version "2.0" then throw "django-raster requires Django >= 2.0. Consider overiding the python package set to use django_2." else buildPythonPackage rec { - version = "0.8"; + version = "0.8.1"; pname = "django-raster"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "9417d8a17930dffee4719f79a38c6ab5d20ac7145d4edf88df0abcb5a360de51"; + sha256 = "213758fe96d74be502f69f2620f7666961a85caa0551d14573637315035a9745"; }; # Tests require a postgresql + postgis server diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django-versatileimagefield/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django-versatileimagefield/default.nix index 4307fc69d4..dc7cde76a6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django-versatileimagefield/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django-versatileimagefield/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "django-versatileimagefield"; - version = "2.0"; + version = "2.1"; src = fetchPypi { inherit pname version; - sha256 = "b197e7066f23bb73b001a61525f2b1cae3dd654bf208a944a7ff5a3fe6107b51"; + sha256 = "e98f7b0abfbf2559d55b08be40911dcc44b6f3437a6c40d81bf66b6914837fdf"; }; propagatedBuildInputs = [ pillow python_magic ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django/2.nix b/third_party/nixpkgs/pkgs/development/python-modules/django/2.nix index e0d3cd12f8..67946ab0d7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django/2.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django/2.nix @@ -6,13 +6,13 @@ buildPythonPackage rec { pname = "Django"; - version = "2.2.22"; + version = "2.2.24"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "db2214db1c99017cbd971e58824e6f424375154fe358afc30e976f5b99fc6060"; + sha256 = "1dvx3x85lggm91x7mpvaf9nmpxyz7r97pbpnmr2k1qfy0c7gyf9k"; }; patches = lib.optional withGdal diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django/3.nix b/third_party/nixpkgs/pkgs/development/python-modules/django/3.nix index 321582946b..ae6187e207 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django/3.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django/3.nix @@ -13,13 +13,13 @@ buildPythonPackage rec { pname = "Django"; - version = "3.2.2"; + version = "3.2.4"; disabled = pythonOlder "3.7"; src = fetchPypi { inherit pname version; - sha256 = "0a1d195ad65c52bf275b8277b3d49680bd1137a5f55039a806f25f6b9752ce3d"; + sha256 = "15pjwyvrx4n8gi8n51b14wp54bg4jqapr25p52597zn6ikdxijb6"; }; patches = lib.optional withGdal diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django_compressor/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django_compressor/default.nix index edf5faa5af..2e58047d8a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django_compressor/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django_compressor/default.nix @@ -2,11 +2,11 @@ rcssmin, rjsmin, django_appconf }: buildPythonPackage rec { pname = "django_compressor"; - version = "2.4"; + version = "2.4.1"; src = fetchPypi { inherit pname version; - sha256 = "0kx7bclfa0sxlsz6ka70zr9ra00lks0hmv1kc99wbanx6xhirvfj"; + sha256 = "3358077605c146fdcca5f9eaffb50aa5dbe15f238f8854679115ebf31c0415e0"; }; postPatch = '' substituteInPlace setup.py --replace 'rcssmin == 1.0.6' 'rcssmin' \ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django_guardian/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django_guardian/default.nix index 957944f01d..0e3eaff6cb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django_guardian/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django_guardian/default.nix @@ -4,11 +4,11 @@ }: buildPythonPackage rec { pname = "django-guardian"; - version = "2.3.0"; + version = "2.4.0"; src = fetchPypi { inherit pname version; - sha256 = "ed2de26e4defb800919c5749fb1bbe370d72829fbd72895b6cf4f7f1a7607e1b"; + sha256 = "c58a68ae76922d33e6bdc0e69af1892097838de56e93e78a8361090bcd9f89a0"; }; checkInputs = [ pytest pytestrunner pytest-django django_environ mock ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/django_taggit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/django_taggit/default.nix index b51f0421fd..cbfcc103c5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/django_taggit/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/django_taggit/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "django-taggit"; - version = "1.3.0"; + version = "1.4.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "4a833bf71f4c2deddd9745924eee53be1c075d7f0020a06f12e29fa3d752732d"; + sha256 = "b9ed6e94bad0bed3bf062a6be7ee3db117fda02c6419c680d614197364ea018b"; }; propagatedBuildInputs = [ isort django ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/djangoql/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/djangoql/default.nix index ef9e6be1d3..c538a37314 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/djangoql/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/djangoql/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "djangoql"; - version = "0.14.3"; + version = "0.15.0"; src = fetchPypi { inherit pname version; - sha256 = "d1b1344cb1e037f094c04ccc67b809e8df80dea1e88cfb919078426131737018"; + sha256 = "ddd876b640faf941aface6e8554dc7e79a79ec00fee12da8a20f9f74301f7943"; }; propagatedBuildInputs = [ ply ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix index 9fb7f88256..82ff51fd38 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "djangorestframework_simplejwt"; - version = "4.6.0"; + version = "4.7.1"; src = fetchPypi { inherit pname version; - sha256 = "7adc913ba0d2ed7f46e0b9bf6e86f9bd9248f1c4201722b732b8213e0ea66f9f"; + sha256 = "c0e9b617da337becb55e67935eb992fad84f861418e7ab5fb3e77a3fd18d4137"; }; propagatedBuildInputs = [ django djangorestframework pyjwt ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dnachisel/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dnachisel/default.nix index 50ba05aca6..12f81d644a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dnachisel/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dnachisel/default.nix @@ -15,13 +15,13 @@ buildPythonPackage rec { pname = "dnachisel"; - version = "3.2.6"; + version = "3.2.7"; src = fetchFromGitHub { owner = "Edinburgh-Genome-Foundry"; repo = "DnaChisel"; rev = "v${version}"; - sha256 = "0m88biw7sycjwsmncdybj9n3yf4n9cyvifv9zv7irm8ha3scchji"; + sha256 = "1zhq7cai47649njjp3m8zaglsv9ci6ci855dymyip8qx5ppnkfj0"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dnslib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dnslib/default.nix index 25a2ffea2f..7e0402999f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dnslib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dnslib/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "dnslib"; - version = "0.9.14"; + version = "0.9.16"; src = fetchPypi { inherit pname version; - sha256 = "1yz63cgiv910wkx90if09bql1n63lq6hy4wfpqink0q4sxy0mlpv"; + sha256 = "2d66b43d563d60c469117c8cb615843e7d05bf8fb2e6cb00a637281d26b7ec7d"; }; checkPhase = "VERSIONS=${python.interpreter} ./run_tests.sh"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/docker-py/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/docker-py/default.nix index f7982c4a11..2d88f64d36 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/docker-py/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/docker-py/default.nix @@ -1,4 +1,4 @@ -{ lib, buildPythonPackage, fetchPypi, six, requests, websocket_client, docker_pycreds }: +{ lib, buildPythonPackage, fetchPypi, six, requests, websocket-client, docker_pycreds }: buildPythonPackage rec { version = "1.10.6"; @@ -15,7 +15,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ six requests - websocket_client + websocket-client docker_pycreds ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/docker/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/docker/default.nix index ab7a7b664b..5e5071e930 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/docker/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/docker/default.nix @@ -9,7 +9,7 @@ , pytestCheckHook , requests , six -, websocket_client +, websocket-client }: buildPythonPackage rec { @@ -27,7 +27,7 @@ buildPythonPackage rec { paramiko requests six - websocket_client + websocket-client ] ++ lib.optional isPy27 backports_ssl_match_hostname; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dockerfile-parse/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dockerfile-parse/default.nix index 45fe856f6f..7afe92b433 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dockerfile-parse/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dockerfile-parse/default.nix @@ -1,12 +1,12 @@ { lib, buildPythonPackage, fetchPypi, six, pytestcov, pytest }: buildPythonPackage rec { - version = "1.1.0"; + version = "1.2.0"; pname = "dockerfile-parse"; src = fetchPypi { inherit pname version; - sha256 = "f37bfa327fada7fad6833aebfaac4a3aaf705e4cf813b737175feded306109e8"; + sha256 = "07e65eec313978e877da819855870b3ae47f3fac94a40a965b9ede10484dacc5"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/docplex/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/docplex/default.nix index 0d2b355b38..670ccae654 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/docplex/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/docplex/default.nix @@ -9,12 +9,12 @@ buildPythonPackage rec { pname = "docplex"; - version = "2.20.204"; + version = "2.21.207"; # No source available from official repo src = fetchPypi { inherit pname version; - sha256 = "sha256-JNjD9UtLHsMGwTuXydZ+L5+pPQ2eobkr26Yt9pgs1qA="; + sha256 = "4f1781592be2b093db939772db8c6575a0f017041fb0cfd784bedf4222ac5e58"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/docutils/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/docutils/default.nix index bae0acc1d4..292fc34e32 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/docutils/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/docutils/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "docutils"; - version = "0.16"; + version = "0.17.1"; src = fetchPypi { inherit pname version; - sha256 = "c2de3a60e9e7d07be26b7f2b00ca0309c207e06c100f9cc2a94931fc75a478fc"; + sha256 = "686577d2e4c32380bb50cbb22f575ed742d58168cee37e99117a854bcd88f125"; }; # Only Darwin needs LANG, but we could set it in general. diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dogpile.cache/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dogpile.cache/default.nix index 4b53045e24..6e14355c29 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dogpile.cache/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dogpile.cache/default.nix @@ -12,12 +12,12 @@ buildPythonPackage rec { pname = "dogpile.cache"; - version = "1.1.2"; + version = "1.1.3"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "2134464672a3deb7ef1366a8691726686d8c62540e4208f1a40c9aaa1a0b6a45"; + sha256 = "6f0bcf97c73bfec1a7bf14e5a248488cee00c2d494bf63f3789ea6d95a57c1cf"; }; # Disable concurrency tests that often fail, diff --git a/third_party/nixpkgs/pkgs/development/python-modules/doorbirdpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/doorbirdpy/default.nix new file mode 100644 index 0000000000..1290aaf057 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/doorbirdpy/default.nix @@ -0,0 +1,32 @@ +{ lib +, buildPythonPackage +, fetchPypi +, requests +}: + +buildPythonPackage rec { + pname = "doorbirdpy"; + version = "2.1.0"; + + src = fetchPypi { + pname = "DoorBirdPy"; + inherit version; + sha256 = "ed0e94953cdf96111c7f73c5fcf358f65dc0ff5e47f63fc057bf18ca7512e606"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # no tests on PyPI, no tags on GitLab + doCheck = false; + + pythonImportsCheck = [ "doorbirdpy" ]; + + meta = with lib; { + description = "Python wrapper for the DoorBird LAN API"; + homepage = "https://gitlab.com/klikini/doorbirdpy"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/downloader-cli/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/downloader-cli/default.nix new file mode 100644 index 0000000000..608286c8bc --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/downloader-cli/default.nix @@ -0,0 +1,27 @@ +{ lib, buildPythonPackage, fetchFromGitHub, urllib3, pytest }: + +buildPythonPackage rec { + pname = "downloader-cli"; + version = "0.3.1"; + + src = fetchFromGitHub { + owner = "deepjyoti30"; + repo = pname; + rev = version; + sha256 = "0gbbjxb9vf5g890cls3mwzl8lmcn6jkpgm5cbrif740mn2b4q228"; + }; + + propagatedBuildInputs = [ urllib3 ]; + + # Disable checks due to networking (Errno 101) + doCheck = false; + + pythonImportsCheck = [ "downloader_cli" ]; + + meta = with lib; { + description = "A simple downloader written in Python with an awesome customizable progressbar. "; + homepage = "https://github.com/deepjyoti30/downloader-cli"; + license = licenses.mit; + maintainers = with maintainers; [ j0hax ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dpkt/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dpkt/default.nix index ebaa4c88b9..e252213605 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dpkt/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dpkt/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "dpkt"; - version = "1.9.5"; + version = "1.9.6"; src = fetchPypi { inherit pname version; - sha256 = "141cab4defcb4ead83e664765ebb045f55dbe73e17d617acafd6eaf368d7c55e"; + sha256 = "b5737010fd420d142e02ed04fa616edd1fc05e414980baef594f72287c875eef"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dropbox/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dropbox/default.nix index 8fc4ee1358..c6751eede2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dropbox/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dropbox/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "dropbox"; - version = "11.4.1"; + version = "11.11.0"; src = fetchPypi { inherit pname version; - sha256 = "7ba43384029424779a4b3ec8d5832362c5c0f37cd644be2fb87e2b30a569849e"; + sha256 = "14dd51e0e3981cb81384a8e13a308de0df13c7c4b6ba7f080177ede947761cbb"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dtlssocket/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dtlssocket/default.nix new file mode 100644 index 0000000000..28eae55ef9 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/dtlssocket/default.nix @@ -0,0 +1,34 @@ +{ lib +, buildPythonPackage +, fetchPypi +, autoconf +, cython +}: + +buildPythonPackage rec { + pname = "dtlssocket"; + version = "0.1.12"; + + src = fetchPypi { + pname = "DTLSSocket"; + inherit version; + sha256 = "909a8f52f1890ec9e92fd46ef609daa8875c2a1c262c0b61200e73c6c2dd5099"; + }; + + nativeBuildInputs = [ + autoconf + cython + ]; + + # no tests on PyPI, no tags on GitLab + doCheck = false; + + pythonImportsCheck = [ "DTLSSocket" ]; + + meta = with lib; { + description = "Cython wrapper for tinydtls with a Socket like interface"; + homepage = "https://git.fslab.de/jkonra2m/tinydtls-cython"; + license = licenses.epl10; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/duecredit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/duecredit/default.nix index ba51405e5e..dfbfe9b183 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/duecredit/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/duecredit/default.nix @@ -14,12 +14,12 @@ buildPythonPackage rec { pname = "duecredit"; - version = "0.8.1"; + version = "0.9.1"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "43b3f01ab5fb2bf2ecc27d3fcf92b873c6b288f44becef3e2e87c96cb89d7b01"; + sha256 = "f6192ce9315b35f6a67174761291e61d0831e496e8ff4acbc061731e7604faf8"; }; # bin/duecredit requires setuptools at runtime diff --git a/third_party/nixpkgs/pkgs/development/python-modules/dwdwfsapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/dwdwfsapi/default.nix index 6699050035..1a68e7474a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/dwdwfsapi/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/dwdwfsapi/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "dwdwfsapi"; - version = "1.0.3"; + version = "1.0.4"; src = fetchPypi { inherit pname version; - sha256 = "sha256-PX1b1msaZH8HKVBo3GU7TOr8Lo7INLjjJBkDHHs6mzk="; + sha256 = "sha256-JOIg6rLrU8v39z1I6smIPEeiUPdSdJcD2avUsTQq+bU="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ecdsa/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ecdsa/default.nix index 3c89218568..15d034bae4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ecdsa/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ecdsa/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "ecdsa"; - version = "0.16.1"; + version = "0.17.0"; src = fetchPypi { inherit pname version; - sha256 = "cfc046a2ddd425adbd1a78b3c46f0d1325c657811c0f45ecc3a0a6236c1e50ff"; + sha256 = "b9f500bb439e4153d0330610f5d26baaf18d17b8ced1bc54410d189385ea68aa"; }; propagatedBuildInputs = [ six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ecoaliface/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ecoaliface/default.nix new file mode 100644 index 0000000000..e3001d7fa4 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/ecoaliface/default.nix @@ -0,0 +1,31 @@ +{ lib +, buildPythonPackage +, fetchPypi +, requests +}: + +buildPythonPackage rec { + pname = "ecoaliface"; + version = "0.4.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "1hzx0r3311f952jik3pgmrg74xp5m6w9c5v6snfrb8w2m19vs6qy"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "ecoaliface" ]; + + meta = with lib; { + description = "Python library for interacting with eCoal water boiler controllers"; + homepage = "https://github.com/matkor/ecoaliface"; + license = with licenses; [ gpl3Plus ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/eebrightbox/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/eebrightbox/default.nix new file mode 100644 index 0000000000..d8050b9bf5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/eebrightbox/default.nix @@ -0,0 +1,58 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pbr +, calmjs-parse +, certifi +, chardet +, idna +, ply +, requests +, urllib3 +, httpretty +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "eebrightbox"; + version = "0.0.6"; + + src = fetchFromGitHub { + owner = "krygal"; + repo = "eebrightbox"; + rev = version; + sha256 = "1kms240g01871qbvyc5rzf86yxsrlnfvp323jh4k35fpf45z44rr"; + }; + + postPatch = '' + substituteInPlace requirements.txt --replace "==" ">=" + ''; + + nativeBuildInputs = [ + pbr + ]; + + PBR_VERSION = version; + + propagatedBuildInputs = [ + calmjs-parse + certifi + chardet + idna + ply + requests + urllib3 + ]; + + checkInputs = [ + httpretty + pytestCheckHook + ]; + + meta = with lib; { + description = "Connector for EE BrightBox routers"; + homepage = "https://github.com/krygal/eebrightbox"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/elasticsearch/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/elasticsearch/default.nix index 8fe4686f7a..86e7477ab3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/elasticsearch/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/elasticsearch/default.nix @@ -7,11 +7,11 @@ buildPythonPackage (rec { pname = "elasticsearch"; - version = "7.12.0"; + version = "7.13.1"; src = fetchPypi { inherit pname version; - sha256 = "9a77172be02bc4855210d83f0f1346a1e7d421e3cb2ca47ba81ac0c5a717b3a0"; + sha256 = "d6bcca0b2e5665d08e6fe6fadc2d4d321affd76ce483603078fc9d3ccd2bc0f9"; }; # Check is disabled because running them destroy the content of the local cluster! diff --git a/third_party/nixpkgs/pkgs/development/python-modules/elementpath/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/elementpath/default.nix index 3bb9269d46..30ff8d0717 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/elementpath/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/elementpath/default.nix @@ -1,7 +1,7 @@ { lib, buildPythonPackage, fetchFromGitHub, isPy27 }: buildPythonPackage rec { - version = "2.2.2"; + version = "2.2.3"; pname = "elementpath"; disabled = isPy27; # uses incompatible class syntax @@ -9,7 +9,7 @@ buildPythonPackage rec { owner = "sissaschool"; repo = "elementpath"; rev = "v${version}"; - sha256 = "sha256-n4zIn2WmFHaVaah2J0mz7Q6G4Ptb8Ms0dwQYbh0Ofcs="; + sha256 = "142w8xbxdvz6949nqd4malqijyxfcv917cls4lsv4x7164b4naf7"; }; # avoid circular dependency with xmlschema which directly depends on this diff --git a/third_party/nixpkgs/pkgs/development/python-modules/elgato/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/elgato/default.nix new file mode 100644 index 0000000000..6ee0cd0191 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/elgato/default.nix @@ -0,0 +1,56 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, aiohttp +, poetry-core +, yarl +, aresponses +, pytest-asyncio +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "elgato"; + version = "2.1.1"; + disabled = pythonOlder "3.8"; + format = "pyproject"; + + src = fetchFromGitHub { + owner = "frenck"; + repo = "python-elgato"; + rev = "v${version}"; + sha256 = "19z568jjyww7vi8s44anrb66qjz5l22nz4jqcz49ybhf22warmff"; + }; + + nativeBuildInputs = [ + poetry-core + ]; + + propagatedBuildInputs = [ + aiohttp + yarl + ]; + + checkInputs = [ + aresponses + pytest-asyncio + pytestCheckHook + ]; + + postPatch = '' + # Upstream doesn't set a version for the pyproject.toml + substituteInPlace pyproject.toml \ + --replace "0.0.0" "${version}" \ + --replace "--cov" "" + ''; + + pythonImportsCheck = [ "elgato" ]; + + meta = with lib; { + description = "Python client for Elgato Key Lights"; + homepage = "https://github.com/frenck/python-elgato"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/email-validator/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/email-validator/default.nix index 5d9f0ca88f..b6112bb87d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/email-validator/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/email-validator/default.nix @@ -1,20 +1,47 @@ -{ lib, buildPythonPackage, fetchPypi, isPy3k, dnspython, idna, ipaddress }: +{ lib +, buildPythonPackage +, fetchFromGitHub +, dnspython +, idna +, pytestCheckHook +}: buildPythonPackage rec { pname = "email-validator"; - version = "1.1.2"; + version = "1.1.3"; - src = fetchPypi { - inherit pname version; - sha256 = "1a13bd6050d1db4475f13e444e169b6fe872434922d38968c67cea9568cce2f0"; + src = fetchFromGitHub { + owner = "JoshData"; + repo = "python-${pname}"; + rev = "v${version}"; + sha256 = "19n6p75m96kwg38bpfsa7ksj26aki02p5pr5f36q8wv3af84s61c"; }; - doCheck = false; - propagatedBuildInputs = [ dnspython idna - ] ++ (if isPy3k then [ ] else [ ipaddress ]); + ]; + + checkInputs = [ + pytestCheckHook + ]; + + disabledTests = [ + # fails with dns.resolver.NoResolverConfiguration due to network sandboxing + "test_deliverability_no_records" + "test_deliverability_found" + "test_deliverability_fails" + "test_deliverability_dns_timeout" + "test_main_single_good_input" + "test_main_multi_input" + "test_main_input_shim" + "test_validate_email__with_caching_resolver" + "test_validate_email__with_configured_resolver" + ]; + + pythonImportsCheck = [ + "email_validator" + ]; meta = with lib; { description = "A robust email syntax and deliverability validation library for Python 2.x/3.x."; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/emulated-roku/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/emulated-roku/default.nix new file mode 100644 index 0000000000..3a9da2ba8e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/emulated-roku/default.nix @@ -0,0 +1,33 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, aiohttp +}: + +buildPythonPackage rec { + pname = "emulated-roku"; + version = "0.2.1"; + + src = fetchFromGitHub { + owner = "mindigmarton"; + repo = "emulated_roku"; + rev = version; + sha256 = "02cbg5wrph19p6x44jlw6cn3jli0kwbgfh6klb3c4k5jfrkhgghw"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "emulated_roku" ]; + + meta = with lib; { + description = "Library to emulate a roku server to serve as a proxy for remotes such as Harmony"; + homepage = "https://github.com/mindigmarton/emulated_roku"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/emv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/emv/default.nix index f68729a42b..c636af4d8c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/emv/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/emv/default.nix @@ -15,7 +15,15 @@ buildPythonPackage rec { hash = "sha256:1715hcba3fdi0i5awnrjdjnk74p66sxm9349pd8bb717zrh4gpj7"; }; - checkInputs = [ pytestCheckHook ]; + postPatch = '' + # argparse is part of the standard libary since python 2.7/3.2 + sed -i '/argparse==1.4.0/d' setup.py + + substituteInPlace setup.py \ + --replace "click==7.1.2" "click" \ + --replace "pyscard==2.0.0" "pyscard" + ''; + propagatedBuildInputs = [ enum-compat click @@ -24,11 +32,9 @@ buildPythonPackage rec { terminaltables ]; - # argparse is part of the standardlib - prePatch = '' - substituteInPlace setup.py \ - --replace '"argparse==1.4.0",' "" - ''; + checkInputs = [ + pytestCheckHook + ]; meta = with lib; { homepage = "https://github.com/russss/python-emv"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/enamlx/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/enamlx/default.nix index 344000fa11..947076dfc4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/enamlx/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/enamlx/default.nix @@ -8,21 +8,15 @@ buildPythonPackage rec { pname = "enamlx"; - version = "0.4.3"; + version = "0.4.6"; src = fetchFromGitHub { owner = "frmdstryr"; repo = pname; rev = "v${version}"; - sha256 = "1rlrx3cw6h1zl9svnqbzwdfy8469qa1y7w6576lbhdwpfhpipscy"; + sha256 = "144bsh6lfrrjk6dygrbc2bfhlv742avj53awxnhgai04hab0214r"; }; - patches = [ - # Minimally modified version of https://github.com/frmdstryr/enamlx/commit/16df11227b8cee724624541d274e481802ea67e3 - # (without the change to setup.py), already on master and expected in the first post-0.4.3 release - ./replace-unicode-with-str.patch - ]; - propagatedBuildInputs = [ enaml # Until https://github.com/inkcut/inkcut/issues/105 perhaps diff --git a/third_party/nixpkgs/pkgs/development/python-modules/enocean/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/enocean/default.nix new file mode 100644 index 0000000000..365d6c94ef --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/enocean/default.nix @@ -0,0 +1,51 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, beautifulsoup4 +, enum-compat +, pyserial +, nose +}: + +buildPythonPackage rec { + pname = "enocean"; + version = "0.60.1"; + + src = fetchFromGitHub { + owner = "kipe"; + repo = "enocean"; + rev = version; + sha256 = "0cbcvvy3qaqv8925z608qmkc1l914crzw79krwrz2vpm2fyribab"; + }; + + propagatedBuildInputs = [ + beautifulsoup4 + enum-compat + pyserial + ]; + + checkInputs = [ + nose + ]; + + checkPhase = '' + runHook preCheck + + nosetests + + runHook postCheck + ''; + + pythonImportsCheck = [ + "enocean.communicators" + "enocean.protocol.packet" + "enocean.utils" + ]; + + meta = with lib; { + description = "EnOcean serial protocol implementation"; + homepage = "https://github.com/kipe/enocean"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/entrance/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/entrance/default.nix index ca6158bd5e..215e69138d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/entrance/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/entrance/default.nix @@ -18,11 +18,11 @@ in buildPythonPackage rec { pname = "entrance"; - version = "1.1.15"; + version = "1.1.17"; src = fetchPypi { inherit pname version; - sha256 = "5b354ecf03226edae567511c8a8db95038cc9c3da20fcfcf5546d1e197eb3aef"; + sha256 = "dee5b4f3330f633fcd4e665f1781bf6e53b375ffdc7a24434257dfba6b1c2d7f"; }; # The versions of `sanic` and `websockets` in nixpkgs only support 3.6 or later diff --git a/third_party/nixpkgs/pkgs/development/python-modules/entrypoint2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/entrypoint2/default.nix index d62361e7be..d1325f6f0e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/entrypoint2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/entrypoint2/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "entrypoint2"; - version = "0.2.3"; + version = "0.2.4"; src = fetchPypi { inherit pname version; - sha256 = "4ac1a8f08477d93282c422faa90875ce5edaa941e1f3fd410b95cb31d9f473a7"; + sha256 = "4770c3afcf3865c606a6e5f7cfcc5c59212f555fcee9b2540270399149c1dde3"; }; propagatedBuildInputs = [ ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/enturclient/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/enturclient/default.nix new file mode 100644 index 0000000000..8ac474b6e5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/enturclient/default.nix @@ -0,0 +1,37 @@ +{ lib +, aiohttp +, async-timeout +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +}: + +buildPythonPackage rec { + pname = "enturclient"; + version = "0.2.1"; + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "hfurubotten"; + repo = pname; + rev = "v${version}"; + sha256 = "158xzv9c2drjgrdhfqm0xzx2d34v45gr5rnjfsi94scffvprgwrg"; + }; + + propagatedBuildInputs = [ + aiohttp + async-timeout + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "enturclient" ]; + + meta = with lib; { + description = "Python library for interacting with the Entur.org API"; + homepage = "https://github.com/hfurubotten/enturclient"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/envs/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/envs/default.nix index 133e99912c..25e6d235cf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/envs/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/envs/default.nix @@ -1,5 +1,12 @@ -{ lib, buildPythonPackage, fetchPypi -, mock, jinja2, click, terminaltables +{ lib +, buildPythonPackage +, fetchPypi +, fetchpatch +, click +, jinja2 +, terminaltables +, mock +, nose }: buildPythonPackage rec { @@ -11,7 +18,32 @@ buildPythonPackage rec { sha256 = "ccf5cd85ddb8ed335e39ed8a22e0d23658f5a6d7da430f225e6f750c6f50ae42"; }; - checkInputs = [ mock jinja2 click terminaltables ]; + patches = [ + # https://github.com/capless/envs/pull/19 + (fetchpatch { + url = "https://github.com/capless/envs/commit/6947043fa9120a7b17094fd43ee0e1edf808f42b.patch"; + sha256 = "0zswg8kp2g922mkc7x34ps37qli1d1mjwna2jfrbnsq2fg4mk818"; + }) + ]; + + propagatedBuildInputs = [ + click + jinja2 + terminaltables + ]; + + checkInputs = [ + mock + nose + ]; + + checkPhase = '' + runHook preCheck + + nosetests --with-isolation + + runHook postCheck + ''; meta = with lib; { description = "Easy access to environment variables from Python"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/epson-projector/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/epson-projector/default.nix new file mode 100644 index 0000000000..756472222d --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/epson-projector/default.nix @@ -0,0 +1,42 @@ +{ lib +, buildPythonPackage +, fetchPypi +, aiohttp +, async-timeout +, pyserial-asyncio +}: + +buildPythonPackage rec { + pname = "epson-projector"; + version = "0.4.2"; + + src = fetchPypi { + pname = "epson_projector"; + inherit version; + sha256 = "4ade1c7a0f7008d23b08bd886c8790c44cf7d60453d1eb5a8077c92aaf790d30"; + }; + + propagatedBuildInputs = [ + aiohttp + async-timeout + pyserial-asyncio + ]; + + # tests need real device + doCheck = false; + + pythonImportsCheck = [ + "epson_projector" + "epson_projector.const" + "epson_projector.projector_http" + "epson_projector.projector_serial" + "epson_projector.projector_tcp" + ]; + + meta = with lib; { + description = "Epson projector support for Python"; + homepage = "https://github.com/pszafer/epson_projector"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/eventlet/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/eventlet/default.nix index 4eaba48922..28c7e9c6ee 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/eventlet/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/eventlet/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "eventlet"; - version = "0.30.2"; + version = "0.31.0"; src = fetchPypi { inherit pname version; - sha256 = "1811b122d9a45eb5bafba092d36911bca825f835cb648a862bbf984030acff9d"; + sha256 = "b36ec2ecc003de87fc87b93197d77fea528aa0f9204a34fdf3b2f8d0f01e017b"; }; propagatedBuildInputs = [ dnspython greenlet monotonic six ] diff --git a/third_party/nixpkgs/pkgs/development/python-modules/exchangelib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/exchangelib/default.nix index bf9ae2284f..c41b047908 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/exchangelib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/exchangelib/default.nix @@ -9,7 +9,7 @@ buildPythonPackage rec { pname = "exchangelib"; - version = "4.1.0"; + version = "4.4.0"; disabled = pythonOlder "3.5"; # tests are not present in the PyPI version @@ -17,7 +17,7 @@ buildPythonPackage rec { owner = "ecederstrand"; repo = pname; rev = "v${version}"; - sha256 = "0lkhjiz78x00d5gzn455660f31f8y4fcrqcn6rh0m41r1ar5im17"; + sha256 = "0d6hfbawp68x18ryxamkamf8kgc55xbrll89g3swrqnm2rrhzrqf"; }; checkInputs = [ psutil requests-mock pyyaml diff --git a/third_party/nixpkgs/pkgs/development/python-modules/execnet/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/execnet/default.nix index 57a4af2fc0..0c75727e74 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/execnet/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/execnet/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "execnet"; - version = "1.8.0"; + version = "1.9.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-tzxVZeUX8kti3qilzqwXjGYcQwnTqgw+QghWwHLEEbQ="; + sha256 = "8f694f3ba9cc92cab508b152dcfe322153975c29bda272e2fd7f3f00f36e47c5"; }; checkInputs = [ pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/extractcode/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/extractcode/default.nix index 481324d729..28dece127b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/extractcode/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/extractcode/default.nix @@ -11,11 +11,11 @@ }: buildPythonPackage rec { pname = "extractcode"; - version = "21.2.24"; + version = "21.6.2"; src = fetchPypi { inherit pname version; - sha256 = "f91638dbf523b80df90ac184c25d5cd1ea24cac53f67a6bb7d7b389867e0744b"; + sha256 = "e665501438fedeb6e75335d880c8913a8cd894fd8adcf9c243eb6d48fad2d01c"; }; dontConfigure = true; @@ -45,6 +45,10 @@ buildPythonPackage rec { disabledTests = [ "test_uncompress_lz4_basic" "test_extract_tarlz4_basic" + # tries to parse /boot/vmlinuz-*, which is not available in the nix sandbox + "test_can_extract_qcow2_vm_image_as_tarball" + "test_can_extract_qcow2_vm_image_not_as_tarball" + "test_can_listfs_from_qcow2_image" ]; pythonImportsCheck = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/extractcode/libarchive.nix b/third_party/nixpkgs/pkgs/development/python-modules/extractcode/libarchive.nix index 0d5e7f3185..8e89c3d6a8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/extractcode/libarchive.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/extractcode/libarchive.nix @@ -6,12 +6,13 @@ , bzip2 , expat , lz4 -, lzma +, xz , zlib , zstd , plugincode , pytestCheckHook }: + buildPythonPackage rec { pname = "extractcode-libarchive"; version = "21.4.4"; @@ -34,7 +35,7 @@ buildPythonPackage rec { ln -s ${lib.getLib bzip2}/lib/libbz2.so libbz2-la3511.so.1.0 ln -s ${lib.getLib expat}/lib/libexpat.so libexpat-la3511.so.1 ln -s ${lib.getLib lz4}/lib/liblz4.so liblz4-la3511.so.1 - ln -s ${lib.getLib lzma}/lib/liblzma.so liblzma-la3511.so.5 + ln -s ${lib.getLib xz}/lib/liblzma.so liblzma-la3511.so.5 ln -s ${lib.getLib zlib}/lib/libz.so libz-la3511.so.1 ln -s ${lib.getLib zstd}/lib/libzstd.so libzstd-la3511.so.1 diff --git a/third_party/nixpkgs/pkgs/development/python-modules/faker/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/faker/default.nix index 8175e1ffb8..12f30b20a4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/faker/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/faker/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "Faker"; - version = "6.6.2"; + version = "6.6.3"; src = fetchPypi { inherit pname version; - sha256 = "f43ac743c34affb1c7fccca8b06450371cd482b6ddcb4110e420acb24356e70b"; + sha256 = "c2852cadc99a4ebdbf06934e4c15e30f2307d414ead21d15605759602645f152"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/fakeredis/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/fakeredis/default.nix index b0cf3b546f..bd4c85a3bb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/fakeredis/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/fakeredis/default.nix @@ -16,12 +16,12 @@ buildPythonPackage rec { pname = "fakeredis"; - version = "1.5.0"; + version = "1.5.2"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "1ac0cef767c37f51718874a33afb5413e69d132988cb6a80c6e6dbeddf8c7623"; + sha256 = "18fc1808d2ce72169d3f11acdb524a00ef96bd29970c6d34cfeb2edb3fc0c020"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/fastapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/fastapi/default.nix index 0f1c7ec6bd..b804d4943b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/fastapi/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/fastapi/default.nix @@ -17,14 +17,14 @@ buildPythonPackage rec { pname = "fastapi"; - version = "0.65.0"; + version = "0.65.2"; format = "flit"; src = fetchFromGitHub { owner = "tiangolo"; repo = "fastapi"; rev = version; - sha256 = "sha256-DPfijCGORF3ThZblqaYTKN0H8+wlhtdIS8lfKfJl/bY="; + sha256 = "032srvbfdy02m1b664x67lkdcx6b2bd4c9a9cb176lscjk213240"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/fasteners/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/fasteners/default.nix index 1cf4c6b30d..0364022fa2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/fasteners/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/fasteners/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "fasteners"; - version = "0.16"; + version = "0.16.3"; src = fetchPypi { inherit pname version; - sha256 = "c995d8c26b017c5d6a6de9ad29a0f9cdd57de61ae1113d28fac26622b06a0933"; + sha256 = "b1ab4e5adfbc28681ce44b3024421c4f567e705cc3963c732bf1cba3348307de"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/fastimport/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/fastimport/default.nix index 383a0e4fbd..c036f5cacb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/fastimport/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/fastimport/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "fastimport"; - version = "0.9.8"; + version = "0.9.13"; src = fetchPypi { inherit pname version; - sha256 = "b2f2e8eb97000256e1aab83d2a0a053fc7b93c3aa4f7e9b971a5703dfc5963b9"; + sha256 = "486135a39edb85808fdbbe2c8009197978800a4544fca56cc2074df32e1304f3"; }; checkPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/fastjsonschema/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/fastjsonschema/default.nix index 34eb0a158d..6a6cc6ea80 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/fastjsonschema/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/fastjsonschema/default.nix @@ -8,7 +8,7 @@ buildPythonPackage rec { pname = "fastjsonschema"; - version = "2.14.5"; + version = "2.15.1"; disabled = pythonOlder "3.3"; @@ -17,19 +17,20 @@ buildPythonPackage rec { repo = "python-fastjsonschema"; rev = "v${version}"; fetchSubmodules = true; - sha256 = "1hgzafswdw5zqrd8qhdxa43crzfy7lrlifdn90133a0h3psr7qs1"; + sha256 = "sha256-ltxFJ3V5/bckusspQ5o0F4reMoB4KpYWPHF8ZNXGqVQ="; }; checkInputs = [ pytestCheckHook ]; dontUseSetuptoolsCheck = true; disabledTests = [ "benchmark" - # these tests require network access "remote ref" "definitions" ]; + pythonImportsCheck = [ "fastjsonschema" ]; + meta = with lib; { description = "Fast JSON schema validator for Python."; homepage = "https://horejsek.github.io/python-fastjsonschema/"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/feedparser/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/feedparser/default.nix index 38e9761952..56059e6dfe 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/feedparser/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/feedparser/default.nix @@ -1,18 +1,18 @@ { lib , buildPythonPackage , fetchPypi -, isPy27 +, pythonOlder , sgmllib3k }: buildPythonPackage rec { pname = "feedparser"; - version = "6.0.2"; - disabled = isPy27; + version = "6.0.8"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "1b00a105425f492f3954fd346e5b524ca9cef3a4bbf95b8809470e9857aa1074"; + sha256 = "sha256-XOBBCgWrJIyMfPyjoOoiA5aO6f9EhgZzea9IJ6WflmE="; }; propagatedBuildInputs = [ sgmllib3k ]; @@ -21,11 +21,12 @@ buildPythonPackage rec { python -Wd tests/runtests.py ''; + pythonImportsCheck = [ "feedparser" ]; + meta = with lib; { homepage = "https://github.com/kurtmckee/feedparser"; description = "Universal feed parser"; license = licenses.bsd2; maintainers = with maintainers; [ domenkozar ]; }; - } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/fiona/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/fiona/default.nix index 7318d1dc51..a71e6fbaa7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/fiona/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/fiona/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "Fiona"; - version = "1.8.19"; + version = "1.8.20"; src = fetchPypi { inherit pname version; - sha256 = "b9059e0b29c2e9e6b817e53f941e77e1aca7075f986005d38db307067b60458f"; + sha256 = "a70502d2857b82f749c09cb0dea3726787747933a2a1599b5ab787d74e3c143b"; }; CXXFLAGS = lib.optionalString stdenv.cc.isClang "-std=c++11"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/flake8/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/flake8/default.nix index 7c81967d07..b6f287669c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/flake8/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/flake8/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "flake8"; - version = "3.9.0"; + version = "3.9.2"; src = fetchPypi { inherit pname version; - sha256 = "78873e372b12b093da7b5e5ed302e8ad9e988b38b063b61ad937f26ca58fc5f0"; + sha256 = "07528381786f2a6237b061f6e96610a4167b226cb926e2aa2b6b1d78057c576b"; }; checkInputs = [ pytest mock pytestrunner ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/flask-api/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/flask-api/default.nix index 3bc3061b3b..841b11a1a8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/flask-api/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/flask-api/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "Flask-API"; - version = "2.0"; + version = "3.0.post1"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "6986642e5b25b7def710ca9489ed2b88c94006bfc06eca01c78da7cf447e66e5"; + sha256 = "1khw0f9ywn1mbdlcl0xspacqjz2pxq00m4g73bksbc1k0i88j61k"; }; propagatedBuildInputs = [ flask markdown ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/flask-compress/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/flask-compress/default.nix index 06c91670f4..5d8359885b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/flask-compress/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/flask-compress/default.nix @@ -3,12 +3,12 @@ }: buildPythonPackage rec { - version = "1.9.0"; + version = "1.10.1"; pname = "Flask-Compress"; src = fetchPypi { inherit pname version; - sha256 = "d93edd8fc02ae74b73c3df10a8e7ee26dee489c65dedce0b3a1d2ce05ac3d1be"; + sha256 = "28352387efbbe772cfb307570019f81957a13ff718d994a9125fa705efb73680"; }; propagatedBuildInputs = [ flask brotli ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/flask-httpauth/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/flask-httpauth/default.nix index ba8e0d0f11..988ae52aa0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/flask-httpauth/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/flask-httpauth/default.nix @@ -1,12 +1,14 @@ -{ lib, python, buildPythonPackage, fetchPypi, flask }: +{ lib, python, isPy3k, buildPythonPackage, fetchPypi, flask }: buildPythonPackage rec { pname = "Flask-HTTPAuth"; - version = "4.3.0"; + version = "4.4.0"; + + disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "05j1mckwhgicrlj4j7ni2rhcf9w4i7phll06jbjjyvs3rj1l4q1f"; + sha256 = "0fl1if91hg2c92b6sic7h2vhxxvb06ri7wflmwp0pfiwbaisgamw"; }; propagatedBuildInputs = [ flask ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/flask-jwt-extended/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/flask-jwt-extended/default.nix index a49aefd5eb..d58ae43103 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/flask-jwt-extended/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/flask-jwt-extended/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "Flask-JWT-Extended"; - version = "4.1.0"; + version = "4.2.1"; src = fetchPypi { inherit pname version; - sha256 = "77ca23f23e80480ea42b9c1d9b0fca214e08db7192583e782c2421416b4a4655"; + sha256 = "76461f2dbdf502261c69ddecd858eaf4164fbcfbf05aa456f3927fc2ab0315de"; }; propagatedBuildInputs = [ dateutil flask pyjwt werkzeug ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/flask-migrate/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/flask-migrate/default.nix index 5297c83d64..26f2ab4aea 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/flask-migrate/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/flask-migrate/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "Flask-Migrate"; - version = "2.7.0"; + version = "3.0.1"; src = fetchPypi { inherit pname version; - sha256 = "ae2f05671588762dd83a21d8b18c51fe355e86783e24594995ff8d7380dffe38"; + sha256 = "00m76kgdkk0w5bfq8hbqszpyaqk0yxdvmz4s67lvd36pc7wfhhjd"; }; checkInputs = [ flask_script ] ++ lib.optional isPy3k glibcLocales; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/flask-restful/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/flask-restful/default.nix index d5b48fd042..db7a63c5ed 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/flask-restful/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/flask-restful/default.nix @@ -1,30 +1,46 @@ -{ lib, buildPythonPackage, fetchPypi, fetchpatch, isPy3k -, nose, mock, blinker, pytest -, flask, six, pytz, aniso8601, pycrypto +{ lib +, buildPythonPackage +, fetchPypi +, aniso8601 +, flask +, pytz +, six +, blinker +, mock +, nose +, pytestCheckHook }: buildPythonPackage rec { pname = "Flask-RESTful"; - version = "0.3.8"; + version = "0.3.9"; src = fetchPypi { inherit pname version; - sha256 = "05b9lzx5yc3wgml2bcq50lq35h66m8zpj6dc9advcb5z3acsbaay"; + sha256 = "0gm5dz088v3d2k1dkcp9b3nnqpkk0fp2jly870hijj2xhc5nbv6c"; }; - propagatedBuildInputs = [ flask six pytz aniso8601 pycrypto ]; + propagatedBuildInputs = [ + aniso8601 + flask + pytz + six + ]; - checkInputs = [ pytest nose mock blinker ]; - - # test_reqparse.py: werkzeug move Multidict location (only imported in tests) - # handle_non_api_error isn't updated for addition encoding argument - checkPhase = '' - pytest --ignore=tests/test_reqparse.py -k 'not handle_non_api_error' - ''; + checkInputs = [ + pytestCheckHook + mock + nose + blinker + ]; meta = with lib; { - homepage = "https://flask-restful.readthedocs.io/"; - description = "REST API building blocks for Flask"; + homepage = "https://flask-restful.readthedocs.io"; + description = "Simple framework for creating REST APIs"; + longDescription = '' + Flask-RESTful provides the building blocks for creating a great + REST API. + ''; license = licenses.bsd3; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/flask-wtf/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/flask-wtf/default.nix index 00af0ce61e..36437ffafa 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/flask-wtf/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/flask-wtf/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "Flask-WTF"; - version = "0.14.3"; + version = "0.15.1"; src = fetchPypi { inherit pname version; - sha256 = "086pvg2x69n0nczcq7frknfjd8am1zdy8qqpva1sanwb02hf65yl"; + sha256 = "ff177185f891302dc253437fe63081e7a46a4e99aca61dfe086fb23e54fff2dc"; }; propagatedBuildInputs = [ flask wtforms nose ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/flask/1.nix b/third_party/nixpkgs/pkgs/development/python-modules/flask/1.nix new file mode 100644 index 0000000000..27f436c3c5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/flask/1.nix @@ -0,0 +1,28 @@ +{ lib, buildPythonPackage, fetchPypi +, itsdangerous, click, werkzeug, jinja2, pytest }: + +buildPythonPackage rec { + version = "1.1.2"; + pname = "Flask"; + + src = fetchPypi { + inherit pname version; + sha256 = "4efa1ae2d7c9865af48986de8aeb8504bf32c7f3d6fdc9353d34b21f4b127060"; + }; + + checkInputs = [ pytest ]; + propagatedBuildInputs = [ itsdangerous click werkzeug jinja2 ]; + + checkPhase = '' + py.test + ''; + + # Tests require extra dependencies + doCheck = false; + + meta = with lib; { + homepage = "http://flask.pocoo.org/"; + description = "A microframework based on Werkzeug, Jinja 2, and good intentions"; + license = licenses.bsd3; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/flask/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/flask/default.nix index 27f436c3c5..166b30ac98 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/flask/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/flask/default.nix @@ -1,28 +1,47 @@ -{ lib, buildPythonPackage, fetchPypi -, itsdangerous, click, werkzeug, jinja2, pytest }: +{ lib +, buildPythonPackage +, fetchPypi +, asgiref +, click +, itsdangerous +, jinja2 +, python-dotenv +, werkzeug +, pytestCheckHook +}: buildPythonPackage rec { - version = "1.1.2"; + version = "2.0.1"; pname = "Flask"; src = fetchPypi { inherit pname version; - sha256 = "4efa1ae2d7c9865af48986de8aeb8504bf32c7f3d6fdc9353d34b21f4b127060"; + sha256 = "0mcgwq7b4qd99mf5bsvs3wphchxarf8kgil4hwww3blj31xjak0w"; }; - checkInputs = [ pytest ]; - propagatedBuildInputs = [ itsdangerous click werkzeug jinja2 ]; + propagatedBuildInputs = [ + asgiref + python-dotenv + click + itsdangerous + jinja2 + werkzeug + ]; - checkPhase = '' - py.test - ''; - - # Tests require extra dependencies - doCheck = false; + checkInputs = [ + pytestCheckHook + ]; meta = with lib; { homepage = "http://flask.pocoo.org/"; - description = "A microframework based on Werkzeug, Jinja 2, and good intentions"; + description = "The Python micro framework for building web applications"; + longDescription = '' + Flask is a lightweight WSGI web application framework. It is + designed to make getting started quick and easy, with the ability + to scale up to complex applications. It began as a simple wrapper + around Werkzeug and Jinja and has become one of the most popular + Python web application frameworks. + ''; license = licenses.bsd3; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/foobot-async/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/foobot-async/default.nix new file mode 100644 index 0000000000..cd5be4ab0c --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/foobot-async/default.nix @@ -0,0 +1,41 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, aiohttp +, async-timeout +, aioresponses +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "foobot-async"; + version = "1.0.0"; + + disabled = pythonOlder "3.5"; + + src = fetchPypi { + pname = "foobot_async"; + inherit version; + sha256 = "fa557a22de925139cb4a21034ffdbcd01d28bf166c0e680eaf84a99206327f40"; + }; + + propagatedBuildInputs = [ + aiohttp + async-timeout + ]; + + checkInputs = [ + aioresponses + pytestCheckHook + ]; + + pythonImportsCheck = [ "foobot_async" ]; + + meta = with lib; { + description = "API Client for Foobot Air Quality Monitoring devices"; + homepage = "https://github.com/reefab/foobot_async"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/fordpass/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/fordpass/default.nix new file mode 100644 index 0000000000..d3120e7bb6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/fordpass/default.nix @@ -0,0 +1,35 @@ +{ lib +, requests +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +}: + +buildPythonPackage rec { + pname = "fordpass"; + version = "0.0.4"; + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "clarkd"; + repo = "fordpass-python"; + rev = version; + sha256 = "0i1dlswxc2bv1smc5d4r1adbxbl7sgr1swh2cjfajp73vs43xa0m"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "fordpass" ]; + + meta = with lib; { + description = "Python module for the FordPass API"; + homepage = "https://github.com/clarkd/fordpass-python"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/forecast-solar/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/forecast-solar/default.nix new file mode 100644 index 0000000000..91b9ce3da0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/forecast-solar/default.nix @@ -0,0 +1,35 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, aiodns +, aiohttp +}: + +buildPythonPackage rec { + pname = "forecast-solar"; + version = "1.3.1"; + + src = fetchFromGitHub { + owner = "home-assistant-libs"; + repo = "forecast_solar"; + rev = version; + sha256 = "1kqzr1ypvdjw0zvac4spb6xdd2qpms9h8nr6vf0w9qx756ir0f95"; + }; + + propagatedBuildInputs = [ + aiodns + aiohttp + ]; + + # no unit tests implemented + doCheck = false; + + pythonImportsCheck = [ "forecast_solar" ]; + + meta = with lib; { + description = "Asynchronous Python client for getting forecast solar information"; + homepage = "https://github.com/home-assistant-libs/forecast_solar"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/foxdot/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/foxdot/default.nix index 072129e6ea..eff080fa2f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/foxdot/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/foxdot/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "FoxDot"; - version = "0.8.11"; + version = "0.8.12"; src = fetchPypi { inherit pname version; - sha256 = "00yqpkv7cxwk301cyiwjzr9yfq8hpnhqyspw3z874ydrl3cmssdb"; + sha256 = "528999da55ad630e540a39c0eaeacd19c58c36f49d65d24ea9704d0781e18c90"; }; propagatedBuildInputs = [ tkinter supercollider ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/fs/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/fs/default.nix index c14b169bea..88aba15544 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/fs/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/fs/default.nix @@ -20,11 +20,11 @@ buildPythonPackage rec { pname = "fs"; - version = "2.4.12"; + version = "2.4.13"; src = fetchPypi { inherit pname version; - sha256 = "c10ba188b14d6213a1ca950efd004931abbfa64b294c80bbf1045753831bf42f"; + sha256 = "caab4dc1561d63c92f36ee78976f6a4a01381830d8420ce34a78d4f1bb1dc95f"; }; buildInputs = [ glibcLocales ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/fsspec/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/fsspec/default.nix index fbcf09de2e..8fb7771dbb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/fsspec/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/fsspec/default.nix @@ -1,33 +1,44 @@ { lib +, stdenv , buildPythonPackage , fetchFromGitHub , pythonOlder , pytestCheckHook , numpy -, stdenv , aiohttp , pytest-vcr , requests +, paramiko +, smbprotocol }: buildPythonPackage rec { pname = "fsspec"; - version = "2021.04.0"; - disabled = pythonOlder "3.5"; + version = "2021.06.0"; + disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "intake"; repo = "filesystem_spec"; rev = version; - sha256 = "sha256-9072kb1VEQ0xg9hB8yEzJMD2Ttd3UGjBmTuhE+Uya1k="; + sha256 = "sha256-2yTjaAuORlZMACKnXkZ6QLMV2o71sPMM2O/bDPaPHD0="; }; - checkInputs = [ pytestCheckHook numpy pytest-vcr ]; + propagatedBuildInputs = [ + aiohttp + paramiko + requests + smbprotocol + ]; + + checkInputs = [ + numpy + pytest-vcr + pytestCheckHook + ]; __darwinAllowLocalNetworking = true; - propagatedBuildInputs = [ aiohttp requests ]; - disabledTests = [ # Test assumes user name is part of $HOME # AssertionError: assert 'nixbld' in '/homeless-shelter/foo/bar' @@ -43,8 +54,10 @@ buildPythonPackage rec { "test_touch" ]; + pythonImportsCheck = [ "fsspec" ]; + meta = with lib; { - description = "A specification that python filesystems should adhere to"; + description = "A specification that Python filesystems should adhere to"; homepage = "https://github.com/intake/filesystem_spec"; license = licenses.bsd3; maintainers = [ maintainers.costrouc ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/funcy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/funcy/default.nix index 515f0925ca..3bb16d64f1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/funcy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/funcy/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "funcy"; - version = "1.15"; + version = "1.16"; src = fetchPypi { inherit pname version; - sha256 = "65b746fed572b392d886810a98d56939c6e0d545abb750527a717c21ced21008"; + sha256 = "2775409b7dc9106283f1224d97e6df5f2c02e7291c8caed72764f5a115dffb50"; }; # No tests diff --git a/third_party/nixpkgs/pkgs/development/python-modules/fuse-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/fuse-python/default.nix index 14f2cb584e..f1bf6e39a0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/fuse-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/fuse-python/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "fuse-python"; - version = "1.0.1"; + version = "1.0.4"; src = fetchPypi { inherit pname version; - sha256 = "da42d4f596a2e91602bcdf46cc51747df31c074a3ceb78bccc253c483a8a75fb"; + sha256 = "b9a69c38b3909ffd35d77cb1a73ebfdc3a103a6d4cdd20c86c70ed1141771580"; }; buildInputs = [ fuse ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/garages-amsterdam/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/garages-amsterdam/default.nix index eeb68b9bbb..08a687d706 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/garages-amsterdam/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/garages-amsterdam/default.nix @@ -7,14 +7,14 @@ buildPythonPackage rec { pname = "garages-amsterdam"; - version = "2.1.0"; + version = "2.1.1"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "klaasnicolaas"; repo = "garages_amsterdam"; rev = version; - sha256 = "1lg66g0im6v0m294j82229n2b7bhs6kkrp0d9nh87k2rz7zgllil"; + sha256 = "1m0bc3bzb83apprk412s7k5r2g6p5br2hrak2a976lh9ifk1d8hj"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/garminconnect-aio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/garminconnect-aio/default.nix new file mode 100644 index 0000000000..bb754118e0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/garminconnect-aio/default.nix @@ -0,0 +1,37 @@ +{ lib +, aiohttp +, brotlipy +, buildPythonPackage +, fetchFromGitHub +, yarl +}: + +buildPythonPackage rec { + pname = "garminconnect-aio"; + version = "0.1.4"; + + src = fetchFromGitHub { + owner = "cyberjunky"; + repo = "python-garminconnect-aio"; + rev = version; + sha256 = "0s2gpy5hciv9akqqhxy0d2ywp6jp9mmdngx34q7fq3xn668kcrhr"; + }; + + propagatedBuildInputs = [ + aiohttp + brotlipy + yarl + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "garminconnect_aio" ]; + + meta = with lib; { + description = "Python module to interact with Garmin Connect"; + homepage = "https://github.com/cyberjunky/python-garminconnect-aio"; + license = licenses.mit; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/garminconnect-ha/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/garminconnect-ha/default.nix new file mode 100644 index 0000000000..e3d4cd5b48 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/garminconnect-ha/default.nix @@ -0,0 +1,33 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, requests +}: + +buildPythonPackage rec { + pname = "garminconnect-ha"; + version = "0.1.6"; + + src = fetchFromGitHub { + owner = "cyberjunky"; + repo = "python-garminconnect-ha"; + rev = version; + sha256 = "0ngas6zikhpja1cdkq64m9pjm4b0z3qaj9g3x88mggy60jsxm1d7"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "garminconnect_ha" ]; + + meta = with lib; { + description = "Minimal Garmin Connect Python 3 API wrapper for Home Assistant"; + homepage = "https://github.com/cyberjunky/python-garminconnect-ha"; + license = licenses.mit; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gcsfs/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gcsfs/default.nix index 483e4a6108..201813b2ec 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gcsfs/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gcsfs/default.nix @@ -1,31 +1,54 @@ -{ buildPythonPackage, fetchFromGitHub, lib, pytestCheckHook, google-auth -, google-auth-oauthlib, requests, decorator, fsspec, ujson, aiohttp, crcmod -, pytest-vcr, vcrpy }: +{ lib +, buildPythonPackage +, fetchFromGitHub +, pytestCheckHook +, pythonOlder +, google-auth +, google-auth-oauthlib +, requests +, decorator +, fsspec +, ujson +, aiohttp +, crcmod +, pytest-vcr +, vcrpy +}: buildPythonPackage rec { pname = "gcsfs"; - version = "2021.04.0"; + version = "2021.06.0"; + disabled = pythonOlder "3.6"; - # github sources needed for test data src = fetchFromGitHub { owner = "dask"; repo = pname; rev = version; - sha256 = "sha256-OA43DaQue7R5d6SzfKThEQFEwJndjLfznu1LMubs5fs="; + sha256 = "sha256-tJeCSGK24WC8E7NKupg6/Tv861idWg6WYir+ZXeU+e0="; }; propagatedBuildInputs = [ + aiohttp + crcmod + decorator + fsspec google-auth google-auth-oauthlib requests - decorator - fsspec - aiohttp ujson - crcmod ]; - checkInputs = [ pytestCheckHook pytest-vcr vcrpy ]; + checkInputs = [ + pytest-vcr + pytestCheckHook + vcrpy + ]; + + disabledTests = [ + # Tests wants to communicate with the Link-local address + "test_GoogleCredentials_None" + ]; + pythonImportsCheck = [ "gcsfs" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gdown/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gdown/default.nix index 8195bb0d40..bbb7c195d9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gdown/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gdown/default.nix @@ -10,11 +10,11 @@ buildPythonApplication rec { pname = "gdown"; - version = "3.12.2"; + version = "3.13.0"; src = fetchPypi { inherit pname version; - sha256 = "4b3a1301e57bfd8dce939bf25ef8fbb4b23967fd0f878eede328bdcc41386bac"; + sha256 = "d5f9389539673875712beba4936c4ace95d24324953c6f0408a858c534c0bf21"; }; propagatedBuildInputs = [ filelock requests tqdm setuptools six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/genanki/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/genanki/default.nix index 3f217afd8b..f755bb8cf8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/genanki/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/genanki/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "genanki"; - version = "0.10.1"; + version = "0.11.0"; src = fetchPypi { inherit pname version; - sha256 = "ced1ddcaecc37289c65c26affb20027705e3821e692327e354e0d5b9b0fd8446"; + sha256 = "f2be87e3c2850bba21627d26728238f9655b448e564f8c70ab47caef558b63ef"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/geoalchemy2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/geoalchemy2/default.nix index 06139b40c3..698cd67bbc 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/geoalchemy2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/geoalchemy2/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "GeoAlchemy2"; - version = "0.8.4"; + version = "0.9.0"; src = fetchPypi { inherit pname version; - sha256 = "02jbad9vbnjx8bmfvxg77z18nymrry6li8hy9pwi0yiyvwbnycyr"; + sha256 = "c32023bc2fb8fbb136f00a0e9c2feba21f3e1040af0f619c888661f6ee72dd28"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/geoip2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/geoip2/default.nix index c0e6580e8a..7cb37780a5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/geoip2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/geoip2/default.nix @@ -8,13 +8,13 @@ }: buildPythonPackage rec { - version = "4.1.0"; + version = "4.2.0"; pname = "geoip2"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "57d8d15de2527e0697bbef44fc16812bba709f03a07ef99297bd56c1df3b1efd"; + sha256 = "906a1dbf15a179a1af3522970e8420ab15bb3e0afc526942cc179e12146d9c1d"; }; patchPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/geopandas/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/geopandas/default.nix index 70963a85d4..7bd45a2b46 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/geopandas/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/geopandas/default.nix @@ -1,45 +1,33 @@ -{ lib, stdenv, buildPythonPackage, fetchFromGitHub, isPy27 -, pandas, shapely, fiona, descartes, pyproj -, pytestCheckHook, Rtree, fetchpatch }: +{ lib, stdenv, buildPythonPackage, fetchFromGitHub, pythonOlder +, pandas, shapely, fiona, pyproj +, pytestCheckHook, Rtree }: buildPythonPackage rec { pname = "geopandas"; - version = "0.8.1"; - disabled = isPy27; + version = "0.9.0"; + disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "geopandas"; repo = "geopandas"; rev = "v${version}"; - sha256 = "0618p0s0biisxk2s0h43hkc3bs1nwjk84rxbfyd6brfvs9yx4vq7"; + sha256 = "sha256-58X562OkRzZ4UTNMTwXW4U5czoa5tbSMBCcE90DqbaE="; }; - patches = [ - # Fix for test test_numerical_operations: https://github.com/geopandas/geopandas/issues/1541 - (fetchpatch { - url = "https://github.com/geopandas/geopandas/pull/1544/commits/6ce868a33a2f483b071089d51e178030fa4414d0.patch"; - sha256 = "1sjgxrqgbhz5krx51hrv230ywszcdl6z8q3bj6830kfad8n8b5dq"; - }) - # Fix GeoJSON for Fiona>=1.8.16 (Sep. 7, 2020). - # https://github.com/geopandas/geopandas/issues/1606 - # Will be included in next upstream release after 0.8.1 - (fetchpatch { - url = "https://github.com/geopandas/geopandas/commit/72427d3d8c128039bfce1d54a76c0b652887b276.patch"; - sha256 = "1726mrpddgmba0ngff73a5bsb6ywpsg63a2pdd2grp9339bgvi4a"; - }) - ]; - propagatedBuildInputs = [ pandas shapely fiona - descartes pyproj ]; doCheck = !stdenv.isDarwin; checkInputs = [ pytestCheckHook Rtree ]; - disabledTests = [ "web" ]; + disabledTests = [ + # requires network access + "test_read_file_remote_geojson_url" + "test_read_file_remote_zipfile_url" + ]; pytestFlagsArray = [ "geopandas" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/georss-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/georss-client/default.nix index e142942f93..2e5fc5da9e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/georss-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/georss-client/default.nix @@ -11,14 +11,14 @@ buildPythonPackage rec { pname = "georss-client"; - version = "0.13"; + version = "0.14"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "exxamalte"; repo = "python-georss-client"; rev = "v${version}"; - sha256 = "1pvx2qb8gs2f7bb8xxq689ydxirsl3bcgsbi5qv5klc4c051dj8i"; + sha256 = "sha256-rviXXNmDLEVNYOCkqvLT9EXSuVpI5wMlCXnlpUUl1P0="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/georss-generic-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/georss-generic-client/default.nix index e01d7fa789..4f2e317c52 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/georss-generic-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/georss-generic-client/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "georss-generic-client"; - version = "0.4"; + version = "0.6"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "exxamalte"; repo = "python-georss-generic-client"; rev = "v${version}"; - sha256 = "0i4shx6fvwibx0hlfmd0dyq2n5lkrqwmlm0l476fdb9bw5lkaiy0"; + sha256 = "sha256-XVejBbVilq8zrmuyBUd0mNPZ4qysSg9lAe/lhbKT+qs="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/georss-ign-sismologia-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/georss-ign-sismologia-client/default.nix index 4ce8336684..3fada45d0c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/georss-ign-sismologia-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/georss-ign-sismologia-client/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "georss-ign-sismologia-client"; - version = "0.2"; + version = "0.3"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "exxamalte"; repo = "python-georss-ign-sismologia-client"; rev = "v${version}"; - sha256 = "1xylgvbdrpl3wxa6qqc8jma4c9520rld0pv28y3b6b0m07ab6ijl"; + sha256 = "sha256-7Jj6uWb4HyPAh3/XtVTy0N23bk33mlIiqlt9z/PW+4Y="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/georss-ingv-centro-nazionale-terremoti-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/georss-ingv-centro-nazionale-terremoti-client/default.nix index a4b317407e..dc253dafe1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/georss-ingv-centro-nazionale-terremoti-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/georss-ingv-centro-nazionale-terremoti-client/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "georss-ingv-centro-nazionale-terremoti-client"; - version = "0.4"; + version = "0.5"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "exxamalte"; repo = "python-georss-ingv-centro-nazionale-terremoti-client"; rev = "v${version}"; - sha256 = "06qhxczznckb208bnfly0q5099scq1yj5rk67a6fqczpsmzcln6x"; + sha256 = "1pd0qsr0n8f1169p2nz8s0zrbrxh0rdzaxdb3jmdymzp4xz28wb0"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/georss-nrcan-earthquakes-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/georss-nrcan-earthquakes-client/default.nix index fc482e220c..089a72ef81 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/georss-nrcan-earthquakes-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/georss-nrcan-earthquakes-client/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "georss-nrcan-earthquakes-client"; - version = "0.2"; + version = "0.3"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "exxamalte"; repo = "python-georss-nrcan-earthquakes-client"; rev = "v${version}"; - sha256 = "0d5cdvi35wj30yvql1sr5n4vz0g4ydrslhql3bya1b7pndfs0h3y"; + sha256 = "1brn6ycsw3d3znbqi2w2cxjw8hyfb44p2lra18rx2gyvgnkxg19l"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/georss-qld-bushfire-alert-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/georss-qld-bushfire-alert-client/default.nix index f95e0a4702..954e4a6237 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/georss-qld-bushfire-alert-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/georss-qld-bushfire-alert-client/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "georss-qld-bushfire-alert-client"; - version = "0.4"; + version = "0.5"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "exxamalte"; repo = "python-georss-qld-bushfire-alert-client"; rev = "v${version}"; - sha256 = "14k7q0ynray1fj0lhxvgxpbdh4pmsqqk9gzmv38p9i7ijx8h1sc8"; + sha256 = "sha256-G7rIoG48MTWngtXCT5xzcjntzsYxtVWVhXflLsWY/dk="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/georss-tfs-incidents-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/georss-tfs-incidents-client/default.nix index 27d43d900f..5428dfcbc5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/georss-tfs-incidents-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/georss-tfs-incidents-client/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "georss-tfs-incidents-client"; - version = "0.2"; + version = "0.3"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "exxamalte"; repo = "python-georss-tfs-incidents-client"; rev = "v${version}"; - sha256 = "10qscn7kncb7h0b8mjykkf5kmm3ga9l8gss4acb888iaigcjgavf"; + sha256 = "11nvwrjzax4yy6aj971yym05yyizwfafy4ccsyy1qpwbs6dwbw7m"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/georss-wa-dfes-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/georss-wa-dfes-client/default.nix index 1f478151bb..ec6a5cd5f2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/georss-wa-dfes-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/georss-wa-dfes-client/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "georss-wa-dfes-client"; - version = "0.2"; + version = "0.3"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "exxamalte"; repo = "python-georss-wa-dfes-client"; rev = "v${version}"; - sha256 = "0zfjq6yyrss61vwgdrykwkikb009q63kg9ab6ryb2509wiwwfwvk"; + sha256 = "01fk67kc6ww88yzsans8g81i6j7s0276gma5fk76la1c8vj2ifs7"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gidgethub/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gidgethub/default.nix index 9d9cc2095e..a65de61b6d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gidgethub/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gidgethub/default.nix @@ -16,13 +16,13 @@ buildPythonPackage rec { pname = "gidgethub"; - version = "5.0.0"; + version = "5.0.1"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "a4a8d8b1ab629757b557d3bcb98a5a77790a3d00b320f5f881a1754cf0e21086"; + sha256 = "3efbd6998600254ec7a2869318bd3ffde38edc3a0d37be0c14bc46b45947b682"; }; nativeBuildInputs = [ setuptools pytestrunner ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gios/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gios/default.nix new file mode 100644 index 0000000000..71aae7b66a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/gios/default.nix @@ -0,0 +1,55 @@ +{ lib +, aiohttp +, aioresponses +, buildPythonPackage +, fetchFromGitHub +, pytest-asyncio +, pytest-error-for-skips +, pytestCheckHook +, pythonOlder +}: + +buildPythonPackage rec { + pname = "gios"; + version = "1.0.1"; + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "bieniu"; + repo = pname; + rev = version; + sha256 = "031z5j1j961pcw8s4ajj5z2xn2jxb2hyfn3x3bxbaagwl9a5qkvn"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + checkInputs = [ + aioresponses + pytest-asyncio + pytest-error-for-skips + pytestCheckHook + ]; + + postPatch = '' + substituteInPlace setup.cfg \ + --replace "--cov --cov-report term-missing " "" + substituteInPlace setup.py \ + --replace "pytest-runner" "" + ''; + + disabledTests = [ + # Test requires network access + "test_invalid_station_id" + ]; + + pythonImportsCheck = [ "gios" ]; + + meta = with lib; { + description = "Python client for getting air quality data from GIOS"; + homepage = "https://github.com/bieniu/gios"; + license = licenses.asl20; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gipc/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gipc/default.nix index 57db65268d..8dc87ffa88 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gipc/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gipc/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "gipc"; - version = "1.1.1"; + version = "1.2.0"; src = fetchPypi { inherit pname version; - sha256 = "f9a9d557e65e17bab8d7ff727ee3f1935e25bd52b01e63c23c7b3b52415728a5"; + sha256 = "6045b22dfbd8aec5542fe15d71684e46df0a4de852ccae6a02c9db3a24076e01"; }; propagatedBuildInputs = [ gevent ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gitdb/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gitdb/default.nix index 1ad0b320da..a5fa115781 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gitdb/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gitdb/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "gitdb"; - version = "4.0.5"; + version = "4.0.7"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "c9e1f2d0db7ddb9a704c2a0217be31214e91a4fe1dea1efad19ae42ba0c285c9"; + sha256 = "96bf5c08b157a666fec41129e6d327235284cca4c81e92109260f353ba138005"; }; propagatedBuildInputs = [ smmap ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/github-to-sqlite/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/github-to-sqlite/default.nix new file mode 100644 index 0000000000..7853854ccd --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/github-to-sqlite/default.nix @@ -0,0 +1,45 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, isPy3k +, pytestCheckHook +, pyyaml +, requests +, requests-mock +, sqlite-utils +}: + +buildPythonPackage rec { + pname = "github-to-sqlite"; + version = "2.8.2"; + disabled = !isPy3k; + + src = fetchFromGitHub { + owner = "dogsheep"; + repo = pname; + rev = version; + sha256 = "16mw429ppnhgsa98qs3fhprqvdpqbr5q1biq3ql8rsf38difdbl8"; + }; + + propagatedBuildInputs = [ + sqlite-utils + pyyaml + requests + ]; + + checkInputs = [ + pytestCheckHook + requests-mock + ]; + + disabledTests = [ + "test_scrape_dependents" + ]; + + meta = with lib; { + description = "Save data from GitHub to a SQLite database"; + homepage = "https://github.com/dogsheep/github-to-sqlite"; + license = licenses.asl20; + maintainers = with maintainers; [ sarcasticadmin ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/goalzero/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/goalzero/default.nix new file mode 100644 index 0000000000..c533af8b7f --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/goalzero/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, aiohttp +, ratelimit +}: + +buildPythonPackage rec { + pname = "goalzero"; + version = "0.1.59"; + + disabled = pythonOlder "3.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "0d0f11aa31672f3ef4ab617db92c87ef6f143804473022405f6da9d830f17638"; + }; + + propagatedBuildInputs = [ + aiohttp + ratelimit + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "goalzero" ]; + + meta = with lib; { + description = "Goal Zero Yeti REST Api Library"; + homepage = "https://github.com/tkdrob/goalzero"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/goocalendar/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/goocalendar/default.nix index 6c371496ff..65cf304acc 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/goocalendar/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/goocalendar/default.nix @@ -11,13 +11,13 @@ buildPythonPackage rec { pname = "GooCalendar"; - version = "0.7.1"; + version = "0.7.2"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "1ccvw1w7xinl574h16hqs6dh3fkpm5n1jrqwjqz3ignxvli5sr38"; + sha256 = "318b3b7790ac9d6d98881eee3b676fc9c17fc15d21dcdaff486e3c303333b41a"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-api-core/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-api-core/default.nix index c24419b01e..653786ace6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-api-core/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-api-core/default.nix @@ -15,11 +15,11 @@ buildPythonPackage rec { pname = "google-api-core"; - version = "1.26.3"; + version = "1.30.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-uRQ0XH6iOGEWJpOidwO6uASlVQT35umryv8XTYDfMqw="; + sha256 = "0724d354d394b3d763bc10dfee05807813c5210f0bd9b8e2ddf6b6925603411c"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-api-python-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-api-python-client/default.nix index f5c8bcc6c3..2d0af0717b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-api-python-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-api-python-client/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "google-api-python-client"; - version = "2.6.0"; + version = "2.9.0"; src = fetchPypi { inherit pname version; - sha256 = "1s1q1nw05925ryvnycq4bmqrxc14cicdl1j4l9xvyis26cjg71va"; + sha256 = "2b5274f06799d80222fd3f20fd4ebcd19f57c009703bd4cf7b00492e7e05e15a"; }; # No tests included in archive diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-auth/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-auth/default.nix index 81753d11b3..1a39296d62 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-auth/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-auth/default.nix @@ -10,6 +10,7 @@ , mock , oauth2client , pyasn1-modules +, pyu2f , pytest-localserver , responses , rsa @@ -19,11 +20,11 @@ buildPythonPackage rec { pname = "google-auth"; - version = "1.28.0"; + version = "1.31.0"; src = fetchPypi { inherit pname version; - sha256 = "9bd436d19ab047001a1340720d2b629eb96dd503258c524921ec2af3ee88a80e"; + sha256 = "154f7889c5d679a6f626f36adb12afbd4dbb0a9a04ec575d989d6ba79c4fd65e"; }; propagatedBuildInputs = [ @@ -32,6 +33,7 @@ buildPythonPackage rec { rsa six pyopenssl + pyu2f ]; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-access-context-manager/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-access-context-manager/default.nix index 3f614258a8..79dce75278 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-access-context-manager/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-access-context-manager/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "google-cloud-access-context-manager"; - version = "0.1.2"; + version = "0.1.3"; src = fetchPypi { inherit pname version; - sha256 = "1qy7wv1xn7g3x5z0vvv0pwmxhin4hw2m9fs9iklnghy00vg37v0b"; + sha256 = "5453e64ca885c302f54c7a630de15e1e0b2c5ef21107ea69bd96fd694d723d5e"; }; propagatedBuildInputs = [ google-api-core ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-appengine-logging/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-appengine-logging/default.nix new file mode 100644 index 0000000000..556bc09ed6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-appengine-logging/default.nix @@ -0,0 +1,45 @@ +{ lib +, buildPythonPackage +, fetchPypi +, google-api-core +, grpc_google_iam_v1 +, mock +, proto-plus +, pytest-asyncio +, pytestCheckHook +, pythonOlder +}: + +buildPythonPackage rec { + pname = "google-cloud-appengine-logging"; + version = "0.1.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "0rkayy2qzsc70b0rdvzd2bxwp5f07rfqb95cyj57dkphq71mrrhw"; + }; + + propagatedBuildInputs = [ + google-api-core + grpc_google_iam_v1 + proto-plus + ]; + + checkInputs = [ + mock + pytestCheckHook + pytest-asyncio + ]; + + pythonImportsCheck = [ + "google.cloud.appengine_logging" + "google.cloud.appengine_logging_v1" + ]; + + meta = with lib; { + description = "Appengine logging client library"; + homepage = "https://github.com/googleapis/python-appengine-logging"; + license = licenses.asl20; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-asset/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-asset/default.nix index bd8bdc0b8c..61e69c5b29 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-asset/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-asset/default.nix @@ -26,7 +26,7 @@ buildPythonPackage rec { postPatch = '' substituteInPlace setup.py \ - --replace '"google-cloud-org-policy >= 0.1.2, < 0.2.0dev"' '"google-cloud-org-policy >= 0.1.2, < 0.2.1"' + --replace '"google-cloud-org-policy >= 0.1.2, < 0.2.0dev"' '"google-cloud-org-policy >= 0.1.2"' ''; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-automl/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-automl/default.nix index 94516e25a3..1d40dcac26 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-automl/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-automl/default.nix @@ -14,14 +14,18 @@ buildPythonPackage rec { pname = "google-cloud-automl"; - version = "2.2.0"; + version = "2.3.0"; src = fetchPypi { inherit pname version; - sha256 = "874defad583e90e55a3e83aff27eb5fe108d9197d839cd45f3eacf2395881806"; + sha256 = "523633496b4fe1ca74a7b22cdaa206581804863813bf461e2f437d0fb7ad21b6"; }; - propagatedBuildInputs = [ google-api-core libcst proto-plus ]; + propagatedBuildInputs = [ + google-api-core + libcst + proto-plus + ]; checkInputs = [ google-cloud-storage @@ -35,10 +39,13 @@ buildPythonPackage rec { preCheck = '' # do not shadow imports rm -r google - # requires credentials - rm tests/system/gapic/v1beta1/test_system_tables_client_v1.py ''; + disabledTestPaths = [ + # requires credentials + "tests/system/gapic/v1beta1/test_system_tables_client_v1.py" + ]; + disabledTests = [ # requires credentials "test_prediction_client_client_info" diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery-datatransfer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery-datatransfer/default.nix index 8aff491547..ec3be9e2ab 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery-datatransfer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery-datatransfer/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-bigquery-datatransfer"; - version = "3.1.0"; + version = "3.1.1"; src = fetchPypi { inherit pname version; - sha256 = "98065257189388b6cc797478c4b2bdf86e9e8cdcaca5d170ded027646444a586"; + sha256 = "9ac8cd06a60bfdc504f39fbcd086e5180c8684cffefe7745a9ff6a639c575629"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery-logging/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery-logging/default.nix new file mode 100644 index 0000000000..566c566bbe --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery-logging/default.nix @@ -0,0 +1,45 @@ +{ lib +, buildPythonPackage +, fetchPypi +, google-api-core +, grpc_google_iam_v1 +, mock +, proto-plus +, pytest-asyncio +, pytestCheckHook +, pythonOlder +}: + +buildPythonPackage rec { + pname = "google-cloud-bigquery-logging"; + version = "0.1.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "0s8vlw157z10yzzkrfyzfl31iad96wfl3ywk9g3gmmh0jfgy0gfj"; + }; + + propagatedBuildInputs = [ + google-api-core + grpc_google_iam_v1 + proto-plus + ]; + + checkInputs = [ + mock + pytestCheckHook + pytest-asyncio + ]; + + pythonImportsCheck = [ + "google.cloud.bigquery_logging" + "google.cloud.bigquery_logging_v1" + ]; + + meta = with lib; { + description = "Bigquery logging client library"; + homepage = "https://github.com/googleapis/python-bigquery-logging"; + license = licenses.asl20; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery/default.nix index 0c62727ff8..acb66394bd 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigquery/default.nix @@ -17,11 +17,11 @@ buildPythonPackage rec { pname = "google-cloud-bigquery"; - version = "2.13.1"; + version = "2.20.0"; src = fetchPypi { inherit pname version; - sha256 = "915f93c61c03d1d6024d5b19355bb96af25da9f924d0b5bab5cde851e1bd48f4"; + sha256 = "ff728f9a4a64d6b4ec5beb7fd2f6ed550b49bfe2b8bb3755c00821716e0d1f91"; }; propagatedBuildInputs = [ @@ -51,6 +51,8 @@ buildPythonPackage rec { # requires credentials "test_bigquery_magic" "TestBigQuery" + # Mocking of _ensure_bqstorage_client fails + "test_to_arrow_ensure_bqstorage_client_wo_bqstorage" ]; pythonImportsCheck = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigtable/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigtable/default.nix index 786250ce9e..f7eb9a51a8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigtable/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-bigtable/default.nix @@ -1,33 +1,55 @@ { lib , buildPythonPackage , fetchPypi -, grpc_google_iam_v1 , google-api-core , google-cloud-core -, pytest +, grpc_google_iam_v1 +, libcst , mock +, proto-plus +, pytestCheckHook }: buildPythonPackage rec { pname = "google-cloud-bigtable"; - version = "1.7.0"; + version = "2.2.0"; src = fetchPypi { inherit pname version; - sha256 = "90bd53a19c33c34101b8567c82a6dc0386af4118d70e1ad69b49375358a21aa6"; + sha256 = "sha256-89fXmr3jHTtp8QOMFeueJwslHJ7Q6srQ/Kxsp0mLlKU="; }; - checkInputs = [ pytest mock ]; - propagatedBuildInputs = [ grpc_google_iam_v1 google-api-core google-cloud-core ]; + propagatedBuildInputs = [ + google-api-core + google-cloud-core + grpc_google_iam_v1 + libcst + proto-plus + ]; + + checkInputs = [ + mock + pytestCheckHook + ]; checkPhase = '' + # Prevent google directory from shadowing google imports rm -r google - pytest tests/unit -k 'not policy' ''; + disabledTests = [ + "policy" + ]; + + pythonImportsCheck = [ + "google.cloud.bigtable_admin_v2" + "google.cloud.bigtable_v2" + "google.cloud.bigtable" + ]; + meta = with lib; { description = "Google Cloud Bigtable API client library"; - homepage = "https://github.com/GoogleCloudPlatform/google-cloud-python"; + homepage = "https://github.com/googleapis/python-bigtable"; license = licenses.asl20; maintainers = [ maintainers.costrouc ]; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-container/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-container/default.nix index ce21a27209..095e0a8447 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-container/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-container/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-container"; - version = "2.4.0"; + version = "2.4.1"; src = fetchPypi { inherit pname version; - sha256 = "c62d15f58459fbe83ba5789f800ac27b4be9a1d7735f6c6b702cd6c3f8c6f0c9"; + sha256 = "e7d93ca399dd6fb5fd0f99190248531c9c583d1a85e7cd2c9ee485495459ee78"; }; propagatedBuildInputs = [ google-api-core grpc_google_iam_v1 libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-core/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-core/default.nix index 3ac6544c15..3e9a3d1851 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-core/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-core/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-core"; - version = "1.6.0"; + version = "1.7.0"; src = fetchPypi { inherit pname version; - sha256 = "c6abb18527545379fc82efc4de75ce9a3772ccad2fc645adace593ba097cbb02"; + sha256 = "2ab0cf260c11d0cc334573301970419abb6a1f3909c6cd136e4be996616372fe"; }; propagatedBuildInputs = [ google-api-core ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dataproc/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dataproc/default.nix index 0115524d54..e98c8be0b4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dataproc/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dataproc/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-dataproc"; - version = "2.3.1"; + version = "2.4.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-TADApBkE4DvEFkVFy56Flh2s6XR9uGxzGTf5aspohsA="; + sha256 = "6e5373febe420e2b2375d2252b272129f11a37ff1b88a7587322931063be8d38"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-datastore/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-datastore/default.nix index 4c8c79c7dd..5ffeac605e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-datastore/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-datastore/default.nix @@ -13,24 +13,37 @@ buildPythonPackage rec { pname = "google-cloud-datastore"; - version = "2.1.0"; + version = "2.1.3"; src = fetchPypi { inherit pname version; - sha256 = "1yyk9ix1jms5q4kk76cfxzy42wzzyl5qladdswjy5l0pg6iypr8i"; + sha256 = "e7a510759b9d55ff63c983e3c42cbf5c35f9b7310f4d611ebe3697da6576bcb4"; }; - propagatedBuildInputs = [ google-api-core google-cloud-core libcst proto-plus ]; + propagatedBuildInputs = [ + google-api-core + google-cloud-core + libcst + proto-plus + ]; - checkInputs = [ google-cloud-testutils mock pytestCheckHook pytest-asyncio ]; + checkInputs = [ + google-cloud-testutils + mock + pytestCheckHook + pytest-asyncio + ]; preCheck = '' # directory shadows imports rm -r google - # requires credentials - rm tests/system/test_system.py ''; + disabledTestPaths = [ + # Requires credentials + "tests/system/test_system.py" + ]; + pythonImportsCheck = [ "google.cloud.datastore" "google.cloud.datastore_admin_v1" diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dlp/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dlp/default.nix index 47f0522e1a..ea5d20142d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dlp/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dlp/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-dlp"; - version = "3.0.1"; + version = "3.1.1"; src = fetchPypi { inherit pname version; - sha256 = "193c2c012639f0c063999e0b899f92d70763be605d5528f3d1da93d6734a1aa8"; + sha256 = "0863e90f9a9cae70af7962dd17d99cb6dde44bf3a029ce5990cb8226557a9e95"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dns/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dns/default.nix index 3e80f9def4..94576499b9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dns/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-dns/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "google-cloud-dns"; - version = "0.32.2"; + version = "0.32.3"; src = fetchPypi { inherit pname version; - sha256 = "0ec98a9933b2abd95b174c9cae0477b90aa4c1f5068b69a9f8ced6d20db1cd5a"; + sha256 = "bbb1c855524bd3f0f2a3b3db883af0d3f618befb976aa694d7e507dd68fc7a71"; }; propagatedBuildInputs = [ google-api-core google-cloud-core ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-error-reporting/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-error-reporting/default.nix index 8a481945ef..8aae0c072a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-error-reporting/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-error-reporting/default.nix @@ -21,12 +21,21 @@ buildPythonPackage rec { postPatch = '' substituteInPlace setup.py \ - --replace 'google-cloud-logging>=1.14.0, <2.1' 'google-cloud-logging>=1.14.0' + --replace 'google-cloud-logging>=1.14.0, <2.4' 'google-cloud-logging>=1.14.0' ''; - propagatedBuildInputs = [ google-cloud-logging libcst proto-plus ]; + propagatedBuildInputs = [ + google-cloud-logging + libcst + proto-plus + ]; - checkInputs = [ google-cloud-testutils mock pytestCheckHook pytest-asyncio ]; + checkInputs = [ + google-cloud-testutils + mock + pytestCheckHook + pytest-asyncio + ]; disabledTests = [ # require credentials @@ -34,8 +43,8 @@ buildPythonPackage rec { "test_report_exception" ]; - # prevent google directory from shadowing google imports preCheck = '' + # prevent google directory from shadowing google imports rm -r google ''; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-firestore/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-firestore/default.nix index f0aac21ee3..1c2dfe88a6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-firestore/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-firestore/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "google-cloud-firestore"; - version = "2.1.0"; + version = "2.1.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-kG68fG9EqwvE72nzc89MXwEQ/YYEM9tYH6zK2iTCFJo="; + sha256 = "143a88ef2b90c98f16d2b0bc192631ca3e2b7c66a236d93ba9961de64e50870e"; }; propagatedBuildInputs = [ @@ -39,10 +39,10 @@ buildPythonPackage rec { rm -r google ''; - pytestFlagsArray = [ - # tests are broken - "--ignore=tests/system/test_system.py" - "--ignore=tests/system/test_system_async.py" + disabledTestPaths = [ + # Tests are broken + "tests/system/test_system.py" + "tests/system/test_system_async.py" ]; disabledTests = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iam-logging/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iam-logging/default.nix new file mode 100644 index 0000000000..55d36ac2a7 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iam-logging/default.nix @@ -0,0 +1,45 @@ +{ lib +, buildPythonPackage +, fetchPypi +, google-api-core +, grpc_google_iam_v1 +, mock +, proto-plus +, pytest-asyncio +, pytestCheckHook +, pythonOlder +}: + +buildPythonPackage rec { + pname = "google-cloud-iam-logging"; + version = "0.1.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "19a8s634w2m1b16zq8f185cpaw7k6d0c7c61g1vzm19jl213rhiw"; + }; + + propagatedBuildInputs = [ + google-api-core + grpc_google_iam_v1 + proto-plus + ]; + + checkInputs = [ + mock + pytestCheckHook + pytest-asyncio + ]; + + pythonImportsCheck = [ + "google.cloud.iam_logging" + "google.cloud.iam_logging_v1" + ]; + + meta = with lib; { + description = "IAM Service Logging client library"; + homepage = "https://github.com/googleapis/python-iam-logging"; + license = licenses.asl20; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iam/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iam/default.nix index 243c2b86c1..873e8169bf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iam/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iam/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-iam"; - version = "2.1.0"; + version = "2.2.0"; src = fetchPypi { inherit pname version; - sha256 = "d34604508e3e87b9161ccd5ff29474867ac91ffb8d29e1a2fc9ff0e26d934b73"; + sha256 = "1f64b78c854c0629f20903011d6def28c981ce5682a5221031f6ae1caa0a1fea"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iot/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iot/default.nix index f9be06a827..5fc87b31c3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iot/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-iot/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-iot"; - version = "2.0.2"; + version = "2.1.0"; src = fetchPypi { inherit pname version; - sha256 = "768ccd567b87bf0030f9458d796cc0a846c40825fa2896b77e9cc7a4af30ba2b"; + sha256 = "f4d7c55636e8cb57a4dde41d933cd8663b1369ab3542b287957959ee59828559"; }; propagatedBuildInputs = [ grpc_google_iam_v1 google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-kms/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-kms/default.nix index 94dd7c1ba8..1caf22bdd2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-kms/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-kms/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-kms"; - version = "2.2.0"; + version = "2.3.0"; src = fetchPypi { inherit pname version; - sha256 = "0f3k2ixp1zsgydpvkj75bs2mb805389snyw30hn41c38qq5ksdga"; + sha256 = "39c6aa1633e45dc0364397b24c83718bd63f833db41d8c93b76019c16208d0f1"; }; propagatedBuildInputs = [ grpc_google_iam_v1 google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-language/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-language/default.nix index c43c51d97f..b6414355a1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-language/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-language/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-language"; - version = "2.0.0"; + version = "2.1.0"; src = fetchPypi { inherit pname version; - sha256 = "123vqfrn7pyn3ia7cmhx8bgafd4gxxlmhf33s3vgspyjck6sprxb"; + sha256 = "63ca2d772e16e4440858848e8c3298859b931b1652f663683fb5d7413b7c9a1b"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-logging/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-logging/default.nix index 55efb8e2c2..6e11f78347 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-logging/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-logging/default.nix @@ -15,11 +15,11 @@ buildPythonPackage rec { pname = "google-cloud-logging"; - version = "2.3.1"; + version = "2.5.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-yi3lG7tKi2BkU7vtMIEPsll1UX/JxrNj4G+DJaGQ/+k="; + sha256 = "ab9d6ee1156cabe8c2483ca5a67bdf3a8582c596dd4e498a59781b6670b085f0"; }; propagatedBuildInputs = [ google-api-core google-cloud-core proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-monitoring/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-monitoring/default.nix index 4c63df9f17..2638a4bda8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-monitoring/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-monitoring/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "google-cloud-monitoring"; - version = "2.2.1"; + version = "2.3.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-QeMJBJKjW3Zu0p0mSmo5dVOJNwRmmA5FKXRXjCd+zN4="; + sha256 = "fcbf644622709277d47b0dd8884efd1d62703bffda3c1030e06404709690c06c"; }; propagatedBuildInputs = [ libcst google-api-core proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-org-policy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-org-policy/default.nix index 7ca698b664..dbeb2c3004 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-org-policy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-org-policy/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "google-cloud-org-policy"; - version = "0.2.0"; + version = "0.3.0"; src = fetchPypi { inherit pname version; - sha256 = "b463704affab327c1d3fa4af280a858635b5f59a88456b2a08db62a336a352aa"; + sha256 = "eea55e99ceec896ffc98ee3051710a241b7d335f246a0472bbffbb0cb2def453"; }; propagatedBuildInputs = [ google-api-core proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-os-config/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-os-config/default.nix index dcb820640a..766ed90376 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-os-config/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-os-config/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "google-cloud-os-config"; - version = "1.1.0"; + version = "1.2.0"; src = fetchPypi { inherit pname version; - sha256 = "c993129ecb1db6ab9b49cacfa11f368f30c7d897640c56f52558edf542c08ade"; + sha256 = "2b828513c1cea481d03d0218516e5c5d8b53756db3637f02cd69ae3c171832dc"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-pubsub/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-pubsub/default.nix index 1a11fcfc73..f0615bd5a2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-pubsub/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-pubsub/default.nix @@ -13,24 +13,37 @@ buildPythonPackage rec { pname = "google-cloud-pubsub"; - version = "2.4.1"; + version = "2.5.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-5gyqZ+JthC/Qja8ZCX79r4K+evuZY5jPZ73cA6hrgSA="; + sha256 = "8706557b71532c76aec48409dcac189caac47cf2decb8850ae75694bf70326b2"; }; - propagatedBuildInputs = [ grpc_google_iam_v1 google-api-core libcst proto-plus ]; + propagatedBuildInputs = [ + grpc_google_iam_v1 + google-api-core + libcst + proto-plus + ]; - checkInputs = [ google-cloud-testutils mock pytestCheckHook pytest-asyncio ]; + checkInputs = [ + google-cloud-testutils + mock + pytestCheckHook + pytest-asyncio + ]; preCheck = '' # prevent google directory from shadowing google imports rm -r google - # Tests in pubsub_v1 attempt to contact pubsub.googleapis.com - rm -r tests/unit/pubsub_v1 ''; + disabledTestPaths = [ + # Tests in pubsub_v1 attempt to contact pubsub.googleapis.com + "tests/unit/pubsub_v1" + ]; + pythonImportsCheck = [ "google.cloud.pubsub" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-redis/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-redis/default.nix index 8787eb6779..fe4ea4249c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-redis/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-redis/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-redis"; - version = "2.1.0"; + version = "2.1.1"; src = fetchPypi { inherit pname version; - sha256 = "957f436986275dcc82483906b424dcabe8d1f8c08ae5c9677bf7547a314b0a59"; + sha256 = "d97fde9361026ab67f53557a8fe9f3db26121959ab586fe453f42a401d40fb4c"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-runtimeconfig/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-runtimeconfig/default.nix index 0a3285566f..6e741a4e29 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-runtimeconfig/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-runtimeconfig/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "google-cloud-runtimeconfig"; - version = "0.32.1"; + version = "0.32.2"; src = fetchPypi { inherit pname version; - sha256 = "1bd8hlp0ssi20ds4gknbxai8mih6xiz8b60ab7p0ngpdqp1kw52p"; + sha256 = "5285aef98fdb9a691e7c54789e7c493c51674b6e77fe6c967172ae8eadbba026"; }; propagatedBuildInputs = [ google-api-core google-cloud-core ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-secret-manager/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-secret-manager/default.nix index 47e23c2142..cf1ac538f1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-secret-manager/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-secret-manager/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-secret-manager"; - version = "2.4.0"; + version = "2.5.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-/ROngNZJld6iA8WjbJLLNzu5vFWPFUNdTikc70kNkQ4="; + sha256 = "e99eb9f77373b97bfc1becb7d23fae5574a33fd9e44b44a3e700abcbfbc9f94d"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-securitycenter/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-securitycenter/default.nix index 184044594d..cc83868079 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-securitycenter/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-securitycenter/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-securitycenter"; - version = "1.1.0"; + version = "1.3.1"; src = fetchPypi { inherit pname version; - sha256 = "1lgz6qpsfv4b7p5ff4sdpjpaddxpbazdvlcrqr1i0c0qil2lkm2i"; + sha256 = "872507adad97f452e0998730cd1993c0433c05a0757c268f5c02fbfabe7720d4"; }; propagatedBuildInputs = [ grpc_google_iam_v1 google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-spanner/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-spanner/default.nix index 726e48ee19..17fe6be971 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-spanner/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-spanner/default.nix @@ -14,25 +14,42 @@ buildPythonPackage rec { pname = "google-cloud-spanner"; - version = "3.3.0"; + version = "3.5.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-XnOCmxQ6YCO1C7RYHzcZY4ihrt2KommWTkTD9y+B5tg="; + sha256 = "19656140f180aef84e023c3a8fd534ac964247a52199317ea33abc701d5a8c5a"; }; - propagatedBuildInputs = [ google-cloud-core grpc_google_iam_v1 libcst proto-plus sqlparse ]; + propagatedBuildInputs = [ + google-cloud-core + grpc_google_iam_v1 + libcst + proto-plus + sqlparse + ]; - checkInputs = [ google-cloud-testutils mock pytestCheckHook pytest-asyncio ]; + checkInputs = [ + google-cloud-testutils + mock + pytestCheckHook + pytest-asyncio + ]; preCheck = '' # prevent google directory from shadowing google imports rm -r google - # disable tests which require credentials - rm tests/system/test_{system,system_dbapi}.py - rm tests/unit/spanner_dbapi/test_{connect,connection,cursor}.py ''; + disabledTestPaths = [ + # Requires credentials + "tests/system/test_system.py" + "tests/system/test_system_dbapi.py" + "tests/unit/spanner_dbapi/test_connect.py" + "tests/unit/spanner_dbapi/test_connection.py" + "tests/unit/spanner_dbapi/test_cursor.py" + ]; + pythonImportsCheck = [ "google.cloud.spanner_admin_database_v1" "google.cloud.spanner_admin_instance_v1" diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-speech/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-speech/default.nix index 2261345f42..8a72a3e006 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-speech/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-speech/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-speech"; - version = "2.2.1"; + version = "2.4.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-AviYDI68Z11M/rqHgQTQugYNemPTA5nW4aVQTiwMYxI="; + sha256 = "991ee0601bc956110e873aee1a74441d66227b10cd581195575435884384f38b"; }; propagatedBuildInputs = [ libcst google-api-core proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-storage/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-storage/default.nix index 40d70176c5..037e96c0e7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-storage/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-storage/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "google-cloud-storage"; - version = "1.37.0"; + version = "1.38.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-IAPF7Uc/mzfQRfMMTIvn0w19Dripe80sWLOovFScTMw="; + sha256 = "162011d66f64b8dc5d7936609a5daf0066cc521231546aea02c126a5559446c4"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-tasks/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-tasks/default.nix index c01c294ec3..420aacb1e4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-tasks/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-tasks/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-tasks"; - version = "2.2.0"; + version = "2.3.0"; src = fetchPypi { inherit pname version; - sha256 = "6be2f2bca14b4eb1c1bdb0f4ba1dadf791e79a2a3e1fae762e5631a3d9fe094e"; + sha256 = "7cc24d389073c40af41e2fc091417dec6e58af07db9b1295853fc3d545c80cfe"; }; propagatedBuildInputs = [ google-api-core grpc_google_iam_v1 libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-texttospeech/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-texttospeech/default.nix index ab4415e341..44055e84ce 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-texttospeech/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-texttospeech/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-texttospeech"; - version = "2.3.0"; + version = "2.4.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-zzssVnXA1xe3270yEOREJ9GdmyRPjV1F4EBelf9AQ/c="; + sha256 = "c50cc21b5df88b696680d8aac3ab6c86820c0e4d071d6a5dcd9b634a456cf59f"; }; propagatedBuildInputs = [ libcst google-api-core proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-trace/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-trace/default.nix index 486a71c7a9..3e96e06c8a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-trace/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-trace/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-trace"; - version = "1.1.0"; + version = "1.2.0"; src = fetchPypi { inherit pname version; - sha256 = "1lvcm4w1l7hiqg64kdscch3f3bq19q9ii49xj4lljn2a4xffxl8v"; + sha256 = "3683477a5d747451332a38d6c8cea652b5991db1f6e4c39907fa3679708ac218"; }; propagatedBuildInputs = [ google-api-core google-cloud-core proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-translate/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-translate/default.nix index a884919c7e..3469043cda 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-translate/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-translate/default.nix @@ -14,16 +14,26 @@ buildPythonPackage rec { pname = "google-cloud-translate"; - version = "3.1.0"; + version = "3.2.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-zVRD2lWRaKtSlZn84Rqpj+a1OT7Wcak524TKsBctueE="; + sha256 = "8cd957f4b29a8c7a983e0a427c2712533c41bb7007b76a8cc88d6c65075c679a"; }; - propagatedBuildInputs = [ google-api-core google-cloud-core libcst proto-plus ]; + propagatedBuildInputs = [ + google-api-core + google-cloud-core + libcst + proto-plus + ]; - checkInputs = [ google-cloud-testutils mock pytestCheckHook pytest-asyncio ]; + checkInputs = [ + google-cloud-testutils + mock + pytestCheckHook + pytest-asyncio + ]; preCheck = '' # prevent shadowing imports diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-videointelligence/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-videointelligence/default.nix index f56b00af0a..4240a4aa2e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-videointelligence/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-videointelligence/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-videointelligence"; - version = "2.1.0"; + version = "2.2.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-gn/KWf3A4SkTqt9rqwYcsaxvfKXPvb7DXJ+zryGjWIA="; + sha256 = "08106ddeec90a27f4bc706f7267ec1c52f2bff745bafd4710bc6898460c8e9a6"; }; propagatedBuildInputs = [ google-api-core proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-vision/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-vision/default.nix index 5857de341d..96360d8dc4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-vision/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-vision/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-vision"; - version = "2.3.0"; + version = "2.3.2"; src = fetchPypi { inherit pname version; - sha256 = "sha256-6XYHADzyk0/WSGk9wni9bOtVURJ+U2Eve8LAh0Eg7KI="; + sha256 = "65ed06725377670fc1b21d474237922f29674d0f99a472b0c84683aa02af70a4"; }; propagatedBuildInputs = [ libcst google-api-core proto-plus]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-websecurityscanner/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-websecurityscanner/default.nix index 971f5cce90..a5e462b64a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-websecurityscanner/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-cloud-websecurityscanner/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-websecurityscanner"; - version = "1.1.0"; + version = "1.3.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-lrMnp9jVndz0C8VdreVudYdwh7zSdRniPHYm9BNdjak="; + sha256 = "632ac3c50eee704ed2a6e87d5a09379589841cf53459813c76f8bea01e77c49d"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-re2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-re2/default.nix new file mode 100644 index 0000000000..a2dbf512b8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-re2/default.nix @@ -0,0 +1,23 @@ +{ lib, buildPythonPackage, pythonOlder, fetchPypi, pybind11, re2, six }: + +buildPythonPackage rec { + pname = "google-re2"; + version = "0.1.20210601"; + disabled = pythonOlder "3.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "1f1ql95f97ss8i0rn1c37kgi0qrf1nq9b3q8xbq9x3gwg7xgzi71"; + }; + + propagatedBuildInputs = [ + pybind11 re2 six + ]; + + meta = with lib; { + description = "RE2 Python bindings"; + homepage = "https://github.com/google/re2"; + license = licenses.bsd3; + maintainers = with maintainers; [ alexbakker ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/google-resumable-media/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/google-resumable-media/default.nix index 531dc1a286..77346282cd 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/google-resumable-media/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/google-resumable-media/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-resumable-media"; - version = "1.2.0"; + version = "1.3.1"; src = fetchPypi { inherit pname version; - sha256 = "0hwxdgsqh6933kp4jkv6hwwdcqs7bgjn9j08ga399njv3s9b367f"; + sha256 = "1a1eb743d13f782d1405437c266b2c815ef13c2b141ba40835c74a3317539d01"; }; propagatedBuildInputs = [ google-auth google-crc32c requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gorilla/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gorilla/default.nix index 42da454164..22e71df324 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gorilla/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gorilla/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "gorilla"; - version = "0.3.0"; + version = "0.4.0"; src = fetchPypi { inherit pname version; - sha256 = "feb2899b923935c25420b94aa8c266ccb5c0315199c685b725303a73195d802c"; + sha256 = "005ab8853b037162a7c77bb824604c6e081878ee03c09ad01ef41744856019d3"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gpy/default.nix index 9c444f465f..217039277b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gpy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gpy/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "GPy"; - version = "1.9.9"; + version = "1.10.0"; src = fetchPypi { inherit pname version; - sha256 = "04faf0c24eacc4dea60727c50a48a07ddf9b5751a3b73c382105e2a31657c7ed"; + sha256 = "a2b793ef8d0ac71739e7ba1c203bc8a5afa191058b42caa617e0e29aa52aa6fb"; }; buildInputs = [ cython ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gpyopt/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gpyopt/default.nix index 85b6efabaa..8852c56967 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gpyopt/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gpyopt/default.nix @@ -1,17 +1,19 @@ { lib, buildPythonPackage, fetchFromGitHub, setuptools -, numpy, scipy, gpy, emcee, nose }: +, numpy, scipy, gpy, emcee, nose, cython }: buildPythonPackage rec { pname = "GPyOpt"; - version = "unstable-2019-09-25"; + version = "1.2.6"; src = fetchFromGitHub { repo = pname; owner = "SheffieldML"; - rev = "249b8ff29c52c12ed867f145a627d529372022d8"; - sha256 = "1ywaw1kpdr7dv4s4cr7afmci86sw7w61178gs45b0lq08652zdlb"; + rev = "v${version}"; + sha256 = "1sv13svaks67i9z560746hz4hslakdna0zd3gxj828il1cv7cslm"; }; + nativeBuildInputs = [ cython ]; + doCheck = false; # requires several packages not available in Nix checkInputs = [ nose ]; @@ -20,6 +22,8 @@ buildPythonPackage rec { propagatedBuildInputs = [ setuptools numpy scipy gpy emcee ]; + pythonImportsCheck = [ "GPyOpt" ]; + meta = with lib; { description = "Bayesian optimization toolbox in Python"; homepage = "https://sheffieldml.github.io/GPyOpt"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gradient/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gradient/default.nix index 1965e0d3ad..92ddbbd73f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gradient/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gradient/default.nix @@ -17,16 +17,16 @@ , requests , requests_toolbelt , terminaltables -, websocket_client +, websocket-client }: buildPythonPackage rec { pname = "gradient"; - version = "1.4.3"; + version = "1.5.5"; src = fetchPypi { inherit pname version; - sha256 = "a8fa91669c97440049132119019e90d0a9cf09e96352cf43c7c6ca244894bd4e"; + sha256 = "fee5016afe5e61a640bb9d7e234a10926c17c9e83c876b617438ff5f5ce039ad"; }; postPatch = '' @@ -55,7 +55,7 @@ buildPythonPackage rec { requests requests_toolbelt terminaltables - websocket_client + websocket-client ]; # tries to use /homeless-shelter to mimic container usage, etc diff --git a/third_party/nixpkgs/pkgs/development/python-modules/graphite-web/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/graphite-web/default.nix index 08125bfc71..cf188e1d5d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/graphite-web/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/graphite-web/default.nix @@ -17,11 +17,11 @@ buildPythonPackage rec { pname = "graphite-web"; - version = "1.1.7"; + version = "1.1.8"; src = fetchPypi { inherit pname version; - sha256 = "b3cb3b9affe1b9e3777aab046416b3d545390ceea4d35d55c753b1e4732eaad0"; + sha256 = "54240b0f1e069b53e2ce92d4e534e21b195fb0ebd64b6ad8a49c44284e3eb0b1"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/graphql-core/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/graphql-core/default.nix index 85021d126a..7ac2542461 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/graphql-core/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/graphql-core/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "graphql-core"; - version = "3.1.4"; + version = "3.1.5"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "graphql-python"; repo = pname; rev = "v${version}"; - sha256 = "sha256-lamV5Rd37WvFBJ+zJUb+UhqxoNUrRhoMJx1NodbQUjs="; + sha256 = "055gfvyax781f4zk4pl60y8yd90bnn4rkqh5i48pczaff0lwlfj1"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/graphql-subscription-manager/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/graphql-subscription-manager/default.nix new file mode 100644 index 0000000000..1a3c32e04d --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/graphql-subscription-manager/default.nix @@ -0,0 +1,38 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, setuptools +, websockets +}: + +buildPythonPackage rec { + pname = "graphql-subscription-manager"; + version = "0.4.0"; + + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "Danielhiversen"; + repo = "PyGraphqlWebsocketManager"; + rev = version; + sha256 = "1176xzr9fa7gl5cm0pcv5lb45d2ms5awi601rjcr3a0a14a1i8fz"; + }; + + propagatedBuildInputs = [ + setuptools + websockets + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "graphql_subscription_manager" ]; + + meta = with lib; { + description = "Python3 library for graphql subscription manager"; + homepage = "https://github.com/Danielhiversen/PyGraphqlWebsocketManager"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/greeclimate/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/greeclimate/default.nix new file mode 100644 index 0000000000..5b2e86b5fb --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/greeclimate/default.nix @@ -0,0 +1,48 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, netifaces +, pycryptodome +, pytest-asyncio +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "greeclimate"; + version = "0.11.8"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "cmroche"; + repo = "greeclimate"; + rev = version; + sha256 = "1n46klbhl0gpd5x995mrcr1qfd77hrfm501qns1zhvv0zk8mdsf4"; + }; + + propagatedBuildInputs = [ + netifaces + pycryptodome + ]; + + checkInputs = [ + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ + "greeclimate" + "greeclimate.device" + "greeclimate.discovery" + "greeclimate.exceptions" + "greeclimate.network" + ]; + + meta = with lib; { + description = "Discover, connect and control Gree based minisplit systems"; + homepage = "https://github.com/cmroche/greeclimate"; + license = licenses.gpl3Only; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/green/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/green/default.nix index 8123f188d6..934c363245 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/green/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/green/default.nix @@ -8,13 +8,13 @@ buildPythonPackage rec { pname = "green"; - version = "3.2.5"; + version = "3.2.6"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "11d595d98afc3363d79e237141ad862c0574a62f92325d9e541ed1b1a54a72ae"; + sha256 = "e51d4ff6e6885942d944304fedc7440a8f87917aa09526beeecb31a0dae655b8"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/greenlet/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/greenlet/default.nix index c1de32eff5..8762d62e59 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/greenlet/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/greenlet/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "greenlet"; - version = "1.0.0"; + version = "1.1.0"; disabled = isPyPy; # builtin for pypy src = fetchPypi { inherit pname version; - sha256 = "1y6wbg9yhm9dw6m768n4yslp56h85pnxkk3drz6icn15g6f1d7ki"; + sha256 = "c87df8ae3f01ffb4483c796fe1b15232ce2b219f0b18126948616224d3f658ee"; }; propagatedBuildInputs = [ six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/growattserver/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/growattserver/default.nix new file mode 100644 index 0000000000..64c6e7bf2b --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/growattserver/default.nix @@ -0,0 +1,42 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +, requests +}: + +buildPythonPackage rec { + pname = "growattserver"; + version = "1.0.1"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "indykoning"; + repo = "PyPi_GrowattServer"; + rev = version; + sha256 = "1vgb92axlz1kkszmamjbsqgi74afnbr2mc1np3pmbn3bx5rmk1d9"; + }; + + propagatedBuildInputs = [ + requests + ]; + + postPatch = '' + # https://github.com/indykoning/PyPi_GrowattServer/issues/2 + substituteInPlace setup.py \ + --replace "tag = os.environ['LATEST_TAG']" "" \ + --replace "version=tag," 'version="${version}",' + ''; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "growattServer" ]; + + meta = with lib; { + description = "Python package to retrieve information from Growatt units"; + homepage = "https://github.com/indykoning/PyPi_GrowattServer"; + license = licenses.mit; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/grpcio-tools/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/grpcio-tools/default.nix index 52091cacc5..7236f7c22e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/grpcio-tools/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/grpcio-tools/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "grpcio-tools"; - version = "1.38.0"; + version = "1.38.1"; src = fetchPypi { inherit pname version; - sha256 = "c609678cf6faf4b467259757f848de4fbc7baca3c1e3f7b0e55c701c50fd94ae"; + sha256 = "cd85f58038b92e1961f8127d79691e84e151390d35cae73c4c0cbe2042f76b77"; }; outputs = [ "out" "dev" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gsd/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gsd/default.nix index b23cfc71e6..8891b51342 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gsd/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gsd/default.nix @@ -4,7 +4,7 @@ }: buildPythonPackage rec { - version = "2.4.1"; + version = "2.4.2"; pname = "gsd"; disabled = isPy27; @@ -12,7 +12,7 @@ buildPythonPackage rec { owner = "glotzerlab"; repo = pname; rev = "v${version}"; - sha256 = "02zxfmqw7a5kz8qjdph9a9961mbkd4haxwwa28yjkxs5hzs5x3c8"; + sha256 = "1yv84girmqm155yjhhkiy1gdflf62110m2kgjiv4vcsjpy2i6has"; }; nativeBuildInputs = [ cython ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gtts/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gtts/default.nix index f3e8162b71..cc08c48f69 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gtts/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gtts/default.nix @@ -15,13 +15,13 @@ buildPythonPackage rec { pname = "gtts"; - version = "2.2.2"; + version = "2.2.3"; src = fetchFromGitHub { owner = "pndurette"; repo = "gTTS"; rev = "v${version}"; - sha256 = "052l7gk1v0zckraavyba1bc2cqvmrbffwxxjsklgnslbdcg5h514"; + sha256 = "1pj7lyd1r72nxs3sgd78awpbsz41g4idjvbsjjp4chfq4qnsq0ji"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gunicorn/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/gunicorn/default.nix index 3f3eceee37..c1f36c2056 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gunicorn/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gunicorn/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "gunicorn"; - version = "20.0.4"; + version = "20.1.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "1904bb2b8a43658807108d59c3f3d56c2b6121a701161de0ddf9ad140073c626"; + sha256 = "e0a968b5ba15f8a328fdfd7ab1fcb5af4470c28aaf7e55df02a99bc13138e6e8"; }; propagatedBuildInputs = [ setuptools ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gurobipy/linux.nix b/third_party/nixpkgs/pkgs/development/python-modules/gurobipy/linux.nix index d572b10fd6..ebcdc0e73f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gurobipy/linux.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/gurobipy/linux.nix @@ -1,21 +1,28 @@ -{ fetchurl, python }: -assert python.pkgs.isPy27; +{ lib, buildPythonPackage, python, gurobi }: -python.pkgs.buildPythonPackage - { pname = "gurobipy"; - version = "7.5.2"; - src = fetchurl - { url = "http://packages.gurobi.com/7.5/gurobi7.5.2_linux64.tar.gz"; - sha256 = "13i1dl22lnmg7z9mb48zl3hy1qnpwdpr0zl2aizda0qnb7my5rnj"; - }; - setSourceRoot = "sourceRoot=$(echo gurobi*/*64)"; - patches = [ ./no-clever-setup.patch ]; - postInstall = "mv lib/libaes*.so* lib/libgurobi*.so* $out/lib"; - postFixup = - '' - patchelf --set-rpath $out/lib \ - $out/lib/python2.7/site-packages/gurobipy/gurobipy.so - patchelf --add-needed libaes75.so \ - $out/lib/python2.7/site-packages/gurobipy/gurobipy.so - ''; - } +buildPythonPackage { + pname = "gurobipy"; + version = "9.1.2"; + + src = gurobi.src; + + setSourceRoot = "sourceRoot=$(echo gurobi*/*64)"; + + patches = [ ./no-clever-setup.patch ]; + + postInstall = '' + mv lib/libgurobi*.so* $out/lib + ''; + + postFixup = '' + patchelf --set-rpath $out/lib \ + $out/lib/${python.libPrefix}/site-packages/gurobipy/gurobipy.so + ''; + + meta = with lib; { + description = "The Gurobi Python interface"; + homepage = "https://www.gurobi.com"; + license = licenses.unfree; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/gurobipy/no-clever-setup.patch b/third_party/nixpkgs/pkgs/development/python-modules/gurobipy/no-clever-setup.patch index c71ac7d686..bcb43a4707 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/gurobipy/no-clever-setup.patch +++ b/third_party/nixpkgs/pkgs/development/python-modules/gurobipy/no-clever-setup.patch @@ -1,7 +1,7 @@ diff -Naur a/setup.py b/setup.py ---- a/setup.py 2017-12-22 10:52:43.730264611 -0500 -+++ b/setup.py 2017-12-22 10:53:27.660104199 -0500 -@@ -15,30 +15,6 @@ +--- a/setup.py 2021-04-24 12:53:18.300255006 -0500 ++++ b/setup.py 2021-04-24 12:47:51.619052574 -0500 +@@ -15,29 +15,6 @@ from distutils.command.install import install import os,sys,shutil @@ -13,7 +13,6 @@ diff -Naur a/setup.py b/setup.py - def finalize_options(self): - self.cwd = os.path.dirname(os.path.realpath(__file__)) - def run(self): -- assert os.getcwd() == self.cwd, 'Must be run from setup.py directory: %s' % self.cwd - build_dir = os.path.join(os.getcwd(), "build") - if os.path.exists(build_dir): - print('removing %s' % build_dir) @@ -32,24 +31,11 @@ diff -Naur a/setup.py b/setup.py License = """ This software is covered by the Gurobi End User License Agreement. By completing the Gurobi installation process and using the software, -@@ -79,20 +55,4 @@ +@@ -78,7 +55,5 @@ packages = ['gurobipy'], package_dir={'gurobipy' : srcpath }, package_data = {'gurobipy' : [srcfile] }, - cmdclass={'install' : GurobiInstall, - 'clean' : GurobiClean } ) -- --if os.name == 'posix' and sys.platform == 'darwin': # update Mac paths -- verstr = sys.version[:3] -- default = '/Library/Frameworks/Python.framework/Versions/%s/Python' % verstr -- default = '/System'+default if verstr == '2.7' else default -- modified = sys.prefix + '/Python' -- if default != modified: -- import subprocess -- from distutils.sysconfig import get_python_lib -- sitelib = get_python_lib() + '/gurobipy/gurobipy.so' -- if not os.path.isfile(modified): # Anaconda -- libver = verstr if verstr == '2.7' else verstr+'m' -- modified = sys.prefix + '/lib/libpython%s.dylib' % libver # For Anaconda -- subprocess.call(('install_name_tool', '-change', default, modified, sitelib)) + diff --git a/third_party/nixpkgs/pkgs/development/python-modules/h2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/h2/default.nix index ba681658e9..fccc164321 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/h2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/h2/default.nix @@ -1,18 +1,48 @@ -{ lib, buildPythonPackage, fetchPypi -, enum34, hpack, hyperframe, pytestCheckHook, hypothesis }: +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, fetchpatch +, hpack +, hyperframe +, pytestCheckHook +, hypothesis +}: buildPythonPackage rec { pname = "h2"; version = "4.0.0"; + format = "setuptools"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; sha256 = "bb7ac7099dd67a857ed52c815a6192b6b1f5ba6b516237fc24a085341340593d"; }; - propagatedBuildInputs = [ enum34 hpack hyperframe ]; + patches = [ + # Workaround issues with hypothesis 6.6 + # https://github.com/python-hyper/h2/pull/1248 + (fetchpatch { + url = "https://github.com/python-hyper/h2/commit/0646279dab694a89562846c810202ce2c0b49be3.patch"; + sha256 = "1k0fsxwq9wbv15sc9ixls4qmxxghlzpflf3awm66ar9m2ikahiak"; + }) + ]; - checkInputs = [ pytestCheckHook hypothesis ]; + propagatedBuildInputs = [ + hpack + hyperframe + ]; + + checkInputs = [ + pytestCheckHook + hypothesis + ]; + + pythonImportCheck = [ + "h2.connection" + "h2.config" + ]; meta = with lib; { description = "HTTP/2 State-Machine based protocol implementation"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/h3/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/h3/default.nix index 3552b6922f..6e5965053f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/h3/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/h3/default.nix @@ -13,14 +13,14 @@ buildPythonPackage rec { pname = "h3"; - version = "3.7.2"; + version = "3.7.3"; # pypi version does not include tests src = fetchFromGitHub { owner = "uber"; repo = "h3-py"; rev = "v${version}"; - sha256 = "00yi5ncfhi2wpakwm9visi1jlnnaaha66y90fjcsfyvi4hkm8xv2"; + sha256 = "0wc1fz8v59r97wlayr4lnsgwzd4fxm991xbs9690d4vwdkapafll"; }; dontConfigure = true; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/habitipy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/habitipy/default.nix new file mode 100644 index 0000000000..d20c89e82e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/habitipy/default.nix @@ -0,0 +1,47 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, plumbum +, requests +, setuptools +, hypothesis +, nose +, responses +}: + +buildPythonPackage rec { + pname = "habitipy"; + version = "0.3.0"; + + src = fetchFromGitHub { + owner = "ASMfreaK"; + repo = "habitipy"; + rev = "v${version}"; + sha256 = "1vf485z5m4h61p64zr3sgkcil2s3brq7dja4n7m49d1fvzcirylv"; + }; + + propagatedBuildInputs = [ + plumbum + requests + setuptools + ]; + + checkInputs = [ + hypothesis + nose + responses + ]; + + checkPhase = '' + HOME=$TMPDIR nosetests + ''; + + pythonImportsCheck = [ "habitipy" ]; + + meta = with lib; { + description = "Tools and library for Habitica restful API"; + homepage = "https://github.com/ASMfreaK/habitipy"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hangups/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hangups/default.nix new file mode 100644 index 0000000000..9c32bc2dd9 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/hangups/default.nix @@ -0,0 +1,70 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, configargparse +, aiohttp +, async-timeout +, appdirs +, readlike +, requests +, reparser +, protobuf +, urwid +, mechanicalsoup +, httpretty +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "hangups"; + version = "0.4.14"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "tdryer"; + repo = "hangups"; + rev = "v${version}"; + sha256 = "14njagpdp13zlaqnwl2mh7fkpnsaqr6wkr4lwh608v06pkwwcwcm"; + }; + + postPatch = '' + substituteInPlace setup.py \ + --replace "protobuf>=3.1.0,<3.16" "protobuf" \ + --replace "MechanicalSoup>=0.6.0,<0.13" "MechanicalSoup" + ''; + + propagatedBuildInputs = [ + configargparse + aiohttp + async-timeout + appdirs + readlike + requests + reparser + protobuf + urwid + mechanicalsoup + ]; + + checkInputs = [ + httpretty + pytestCheckHook + ]; + + pythonImportsCheck = [ + "hangups" + "hangups.client" + "hangups.event" + "hangups.parsers" + "hangups.user" + ]; + + meta = with lib; { + description = "The first third-party instant messaging client for Google Hangouts"; + homepage = "https://github.com/tdryer/hangups"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/HAP-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hap-python/default.nix similarity index 89% rename from third_party/nixpkgs/pkgs/development/python-modules/HAP-python/default.nix rename to third_party/nixpkgs/pkgs/development/python-modules/hap-python/default.nix index 8380832abd..946f0039a0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/HAP-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hap-python/default.nix @@ -16,16 +16,16 @@ }: buildPythonPackage rec { - pname = "HAP-python"; - version = "3.4.1"; + pname = "hap-python"; + version = "3.5.0"; disabled = pythonOlder "3.5"; # pypi package does not include tests src = fetchFromGitHub { owner = "ikalchev"; - repo = pname; + repo = "HAP-python"; rev = "v${version}"; - sha256 = "sha256-tZ6Zwlx5J62Xqpxxmt8Phdd9ngtKYhP/p3uor1dRfK8="; + sha256 = "1vzlfx0gpidl0rzv4z94pziwm6rj4lrilly5pykgq984y708pcqf"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hass-nabucasa/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hass-nabucasa/default.nix index 1abd9648e9..f69f140017 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hass-nabucasa/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hass-nabucasa/default.nix @@ -24,10 +24,6 @@ buildPythonPackage rec { sha256 = "sha256-eQdbAQRKqnJGxnSTkk3gld9TX9MpP3J8LFNYH6peVIY="; }; - postPatch = '' - sed -i 's/"acme.*"/"acme"/' setup.py - ''; - propagatedBuildInputs = [ acme aiohttp @@ -44,11 +40,17 @@ buildPythonPackage rec { pytestCheckHook ]; + postPatch = '' + sed -i 's/"acme.*"/"acme"/' setup.py + substituteInPlace setup.py \ + --replace "snitun==" "snitun>=" + ''; + pythonImportsCheck = [ "hass_nabucasa" ]; meta = with lib; { homepage = "https://github.com/NabuCasa/hass-nabucasa"; - description = "Home Assistant cloud integration by Nabu Casa, inc."; + description = "Python module for the Home Assistant cloud integration"; license = licenses.gpl3Only; maintainers = with maintainers; [ Scriptkiddi ]; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hbmqtt/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hbmqtt/default.nix index c457da9188..37a4762bfc 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hbmqtt/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hbmqtt/default.nix @@ -18,6 +18,10 @@ buildPythonPackage rec { ]; postPatch = '' + # https://github.com/beerfactory/hbmqtt/pull/241 + substituteInPlace hbmqtt/adapters.py \ + --replace "websockets.protocol" "websockets.legacy.protocol" + # test tries to bind same port multiple times and fails rm tests/test_client.py ''; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hdate/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hdate/default.nix index a034eddd56..5c8a2c1e9f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hdate/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hdate/default.nix @@ -2,7 +2,6 @@ , astral , buildPythonPackage , fetchFromGitHub -, fetchpatch , poetry-core , pytestCheckHook , pythonOlder @@ -11,7 +10,7 @@ buildPythonPackage rec { pname = "hdate"; - version = "0.10.2"; + version = "0.10.3"; disabled = pythonOlder "3.6"; format = "pyproject"; @@ -19,7 +18,7 @@ buildPythonPackage rec { owner = "py-libhdate"; repo = "py-libhdate"; rev = "v${version}"; - sha256 = "07b0c7q8w6flj4q72v58d3wymsxfp5qz8z97qhhc2977mjx5fsxd"; + sha256 = "sha256-6rOsG6qgq4woBhj25SNWvKshvFLBL/6MJiBZb+NPvdk="; }; nativeBuildInputs = [ @@ -35,15 +34,6 @@ buildPythonPackage rec { pytestCheckHook ]; - patches = [ - # Version was not updated for the release - (fetchpatch { - name = "update-version.patch"; - url = "https://github.com/py-libhdate/py-libhdate/commit/b8186a891b29fed99def5ce0985ee0ae1e0dd77e.patch"; - sha256 = "1pmhgh57x9390ff5gyisng0l6b79sd6dxmf172hpk1gr03c3hv98"; - }) - ]; - postPatch = '' substituteInPlace pyproject.toml --replace "^2020.5" ">=2020.5" ''; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/herepy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/herepy/default.nix new file mode 100644 index 0000000000..13454e4e19 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/herepy/default.nix @@ -0,0 +1,40 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, requests +, pytestCheckHook +, responses +}: + +buildPythonPackage rec { + pname = "herepy"; + version = "3.5.3"; + + disabled = pythonOlder "3.5"; + + src = fetchFromGitHub { + owner = "abdullahselek"; + repo = "HerePy"; + rev = version; + sha256 = "sha256-05x3EQoyv38j4UcixN0sf5BI2oTjfasAIQyZqQSjdPM="; + }; + + propagatedBuildInputs = [ + requests + ]; + + checkInputs = [ + pytestCheckHook + responses + ]; + + pythonImportsCheck = [ "herepy" ]; + + meta = with lib; { + description = "Library that provides a Python interface to the HERE APIs"; + homepage = "https://github.com/abdullahselek/HerePy"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hg-evolve/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hg-evolve/default.nix index 46db97a9ae..a0229d1e50 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hg-evolve/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hg-evolve/default.nix @@ -1,19 +1,54 @@ { lib , buildPythonPackage , fetchPypi -, isPy3k +, mercurial }: buildPythonPackage rec { pname = "hg-evolve"; - version = "10.3.1"; + version = "10.3.2"; src = fetchPypi { inherit pname version; - sha256 = "03xwnadpvgna70n6pfxb7xdrszppdqrx5qmkbr1v0jzbh5rnzi6b"; + sha256 = "ba819732409d39ddd4ff2fc507dc921408bf30535d2d78313637b29eeac98860"; }; - doCheck = false; + checkInputs = [ + mercurial + ]; + + checkPhase = '' + runHook preCheck + + export TESTTMP=$(mktemp -d) + export HOME=$TESTTMP + cat <$HOME/.hgrc + [extensions] + evolve = + topic = + EOF + + # Shipped tests use the mercurial testing framework, and produce inconsistent results. + # Do a quick smoke-test to see if things do what we expect. + hg init $TESTTMP/repo + pushd $TESTTMP/repo + touch a + hg add a + hg commit -m "init a" + hg topic something + + touch b + hg add b + hg commit -m "init b" + + echo hi > b + hg amend + + hg obslog + popd + + runHook postCheck + ''; meta = with lib; { description = "Enables the “changeset evolution” feature of Mercurial core"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hid/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hid/default.nix new file mode 100644 index 0000000000..8dc134c61c --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/hid/default.nix @@ -0,0 +1,34 @@ +{ lib +, stdenv +, buildPythonPackage +, fetchPypi +, hidapi +, nose +}: + +buildPythonPackage rec { + pname = "hid"; + version = "1.0.4"; + + src = fetchPypi { + inherit pname version; + sha256 = "sha256-9hsDgvN6M0vIuoYEvIS5SHXuT1lPu6+CssOz6CeIP8E="; + }; + + propagatedBuildInputs = [ hidapi ]; + + checkInputs = [ nose ]; + + postPatch = '' + hidapi=${hidapi}/lib/ + test -d $hidapi || { echo "ERROR: $hidapi doesn't exist, please update/fix this build expression."; exit 1; } + sed -i -e "s|libhidapi|$hidapi/libhidapi|" hid/__init__.py + ''; + + meta = with lib; { + description = "hidapi bindings in ctypes"; + homepage = "https://github.com/apmorton/pyhidapi"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ AndersonTorres ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hijri-converter/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hijri-converter/default.nix index 07f3956c54..d7ae17ed61 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hijri-converter/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hijri-converter/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "hijri-converter"; - version = "2.1.1"; + version = "2.1.2"; src = fetchPypi { inherit pname version; - sha256 = "08gv6ypn2zd0i8yrv24m448xkic492qrgxj349slp1achhg9p7ln"; + sha256 = "43b5ac566e7a7deeab364a2397e94405a65fd24ea786073eb3d4c740ebda7b9b"; }; checkInputs = [ pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hlk-sw16/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hlk-sw16/default.nix new file mode 100644 index 0000000000..d013664ad2 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/hlk-sw16/default.nix @@ -0,0 +1,28 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +}: + +buildPythonPackage rec { + pname = "hlk-sw16"; + version = "0.0.9"; + + src = fetchFromGitHub { + owner = "jameshilliard"; + repo = "hlk-sw16"; + rev = version; + sha256 = "010s85nr6xn89i8yvdagg72a97dh1v2pyfqa33v76p9p8xbgh8dz"; + }; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "hlk_sw16" ]; + + meta = with lib; { + description = "Python client for HLK-SW16"; + homepage = "https://github.com/jameshilliard/hlk-sw16"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/holoviews/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/holoviews/default.nix index 667da5aa64..0cf33a8f58 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/holoviews/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/holoviews/default.nix @@ -16,11 +16,11 @@ buildPythonPackage rec { pname = "holoviews"; - version = "1.14.2"; + version = "1.14.4"; src = fetchPypi { inherit pname version; - sha256 = "64f85cf2c99b083b96f26cd26452aec4b41ced6d9e57f56ae8d72b88defc61c9"; + sha256 = "08e8be82c2e514e1700a75f02307f414179dc0ecfa2202702dd304a381909eaa"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/homematicip/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/homematicip/default.nix index b2d6da18fe..c8cc21278b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/homematicip/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/homematicip/default.nix @@ -10,7 +10,7 @@ , pytest-aiohttp , pytest-asyncio , requests -, websocket_client +, websocket-client , websockets }: @@ -31,7 +31,7 @@ buildPythonPackage rec { aiohttp async-timeout requests - websocket_client + websocket-client websockets ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/howdoi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/howdoi/default.nix index f75a84c01b..b886e3c8b4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/howdoi/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/howdoi/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "howdoi"; - version = "2.0.14"; + version = "2.0.16"; src = fetchPypi { inherit pname version; - sha256 = "9416be3c8a319fc0764a743a2ad05fa374876dab71dbe15ce86c3a05ece44a0a"; + sha256 = "0257fbb328eb3a15ed3acc498314902f00908b130209073509eec21cb7235b2b"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hstspreload/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hstspreload/default.nix index e30435c568..e6a3837522 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hstspreload/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hstspreload/default.nix @@ -6,14 +6,14 @@ buildPythonPackage rec { pname = "hstspreload"; - version = "2021.5.31"; + version = "2021.6.28"; disabled = isPy27; src = fetchFromGitHub { owner = "sethmlarson"; repo = pname; rev = version; - sha256 = "sha256-qTOzhPET2uj/ST28pzeckFTYYfyPgErvG4HB9zMMB2w="; + sha256 = "sha256-SZGyn79R3+IwtoZ+khgFnl0WosRoCcKNk8efGxbOugc="; }; # tests require network connection diff --git a/third_party/nixpkgs/pkgs/development/python-modules/html-sanitizer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/html-sanitizer/default.nix index 17783f38d1..546f1acad0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/html-sanitizer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/html-sanitizer/default.nix @@ -1,4 +1,10 @@ -{ lib, buildPythonPackage, fetchFromGitHub, lxml, beautifulsoup4, pytest, pytestrunner }: +{ lib +, buildPythonPackage +, fetchFromGitHub +, lxml +, beautifulsoup4 +, pytestCheckHook +}: buildPythonPackage rec { pname = "html-sanitizer"; @@ -11,11 +17,23 @@ buildPythonPackage rec { sha256 = "0nnv34924r0yn01rwlk749j5ijy7yxyj302s1i57yjrkqr3zlvas"; }; - propagatedBuildInputs = [ lxml beautifulsoup4 ]; + propagatedBuildInputs = [ + lxml + beautifulsoup4 + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pytestFlagsArray = [ "html_sanitizer/tests.py" ]; + + pythonImportsCheck = [ "html_sanitizer" ]; meta = with lib; { - description = "An allowlist-based and very opinionated HTML sanitizer that can be used both for untrusted and trusted sources."; + description = "Allowlist-based and very opinionated HTML sanitizer"; homepage = "https://github.com/matthiask/html-sanitizer"; - license = licenses.bsd3; + license = with licenses; [ bsd3 ]; + maintainers = with maintainers; [ fab ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/httpcore/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/httpcore/default.nix index 079b5e71a1..de2f9b00f5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/httpcore/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/httpcore/default.nix @@ -2,31 +2,33 @@ , buildPythonPackage , pythonOlder , fetchFromGitHub +, anyio , h11 , h2 , pproxy , pytest-asyncio -, pytest-trio , pytestCheckHook , pytestcov , sniffio +, trio , trustme , uvicorn }: buildPythonPackage rec { pname = "httpcore"; - version = "0.13.0"; + version = "0.13.6"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "encode"; repo = pname; rev = version; - sha256 = "sha256-KvqBVQUaF3p2oJz0tt3Bkn2JiKEHqrZ3b6I9f0JK5h8="; + sha256 = "sha256-7G7jchOQTgcFSGZfoMPFm0NY9ofg5MM5Xn5lV+W9w8k="; }; propagatedBuildInputs = [ + anyio h11 h2 sniffio @@ -35,9 +37,9 @@ buildPythonPackage rec { checkInputs = [ pproxy pytest-asyncio - pytest-trio pytestCheckHook pytestcov + trio trustme uvicorn ]; @@ -45,6 +47,7 @@ buildPythonPackage rec { disabledTestPaths = [ # these tests fail during dns lookups: httpcore.ConnectError: [Errno -2] Name or service not known "tests/test_threadsafety.py" + "tests/async_tests/" "tests/sync_tests/test_interfaces.py" "tests/sync_tests/test_retries.py" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/httpretty/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/httpretty/default.nix index b4a82d04fa..f0c0b9b2ee 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/httpretty/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/httpretty/default.nix @@ -19,7 +19,7 @@ buildPythonPackage rec { pname = "httpretty"; - version = "1.0.5"; + version = "1.1.3"; # drop this for version > 0.9.7 # Flaky tests: https://github.com/gabrielfalcao/HTTPretty/pull/394 @@ -27,7 +27,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "e53c927c4d3d781a0761727f1edfad64abef94e828718e12b672a678a8b3e0b5"; + sha256 = "229ade39175ea4324e767f29dc24e5f846fbc72bf80e1a919b2547a6574ff601"; }; propagatedBuildInputs = [ six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/httptools/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/httptools/default.nix index ed25195e3f..54b512be1f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/httptools/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/httptools/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "httptools"; - version = "0.1.1"; + version = "0.2.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "41b573cf33f64a8f8f3400d0a7faf48e1888582b6f6e02b82b9bd4f0bf7497ce"; + sha256 = "94505026be56652d7a530ab03d89474dc6021019d6b8682281977163b3471ea0"; }; # tests are not included in pypi tarball diff --git a/third_party/nixpkgs/pkgs/development/python-modules/huawei-lte-api/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/huawei-lte-api/default.nix new file mode 100644 index 0000000000..44cbfd4f0e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/huawei-lte-api/default.nix @@ -0,0 +1,51 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, dicttoxml +, requests +, xmltodict +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "huawei-lte-api"; + version = "1.4.18"; + + disabled = pythonOlder "3.4"; + + src = fetchFromGitHub { + owner = "Salamek"; + repo = "huawei-lte-api"; + rev = version; + sha256 = "1qaqxmh03j10wa9wqbwgc5r3ays8wfr7bldvsm45fycr3qfyn5fg"; + }; + + postPatch = '' + substituteInPlace setup.py \ + --replace "pytest-runner" "" + ''; + + propagatedBuildInputs = [ + dicttoxml + requests + xmltodict + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ + "huawei_lte_api.AuthorizedConnection" + "huawei_lte_api.Client" + "huawei_lte_api.Connection" + ]; + + meta = with lib; { + description = "API For huawei LAN/WAN LTE Modems"; + homepage = "https://github.com/Salamek/huawei-lte-api"; + license = licenses.lgpl3Only; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/huisbaasje-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/huisbaasje-client/default.nix new file mode 100644 index 0000000000..a8db5e2abc --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/huisbaasje-client/default.nix @@ -0,0 +1,38 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, aiohttp +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "huisbaasje-client"; + version = "0.1.0"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "dennisschroer"; + repo = "huisbaasje-client"; + rev = "v${version}"; + sha256 = "113aymffyz1nki3a43j5cyj87qa0762j38qlz0wd5px7diwjxsfl"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "huisbaasje.huisbaasje" ]; + + meta = with lib; { + description = "Client for Huisbaasje"; + homepage = "https://github.com/dennisschroer/huisbaasje-client"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/humanfriendly/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/humanfriendly/default.nix index 81ea4286c9..b88fc96337 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/humanfriendly/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/humanfriendly/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "humanfriendly"; - version = "9.1"; + version = "9.2"; src = fetchPypi { inherit pname version; - sha256 = "sha256-BmVilWY5qyH/JnbR/aC1mH6YXFNPx2cAoZvVS8uBEh0="; + sha256 = "f7dba53ac7935fd0b4a2fc9a29e316ddd9ea135fb3052d3d0279d10c18ff9c48"; }; propagatedBuildInputs = lib.optional (pythonOlder "3.3") monotonic; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/humanize/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/humanize/default.nix index 5184f83881..4c5bd0e3af 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/humanize/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/humanize/default.nix @@ -9,13 +9,13 @@ }: buildPythonPackage rec { - version = "3.3.0"; + version = "3.9.0"; pname = "humanize"; disabled = isPy27; # setup.py no longer compatible src = fetchPypi { inherit pname version; - sha256 = "8bf7abd672b867f38b8b04593829b85b9b6199a61ef6586bf3629cc06458ff35"; + sha256 = "892a5b7b87763c4c6997a58382c2b1f4614048a2e01c23ef1bb0456e6f9d4d5d"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hupper/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hupper/default.nix index 27e308ee44..9726069746 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hupper/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hupper/default.nix @@ -3,25 +3,35 @@ , buildPythonPackage , fetchPypi , pytestCheckHook -, pytest-cov , watchdog }: buildPythonPackage rec { pname = "hupper"; - version = "1.10.2"; + version = "1.10.3"; src = fetchPypi { inherit pname version; - sha256 = "3818f53dabc24da66f65cf4878c1c7a9b5df0c46b813e014abdd7c569eb9a02a"; + sha256 = "sha256-zW9Rtyx1h7ybzopl7NAloelfGwMoRRm/6RKE0BAxbNk="; }; # FIXME: watchdog dependency is disabled on Darwin because of #31865, which causes very silent # segfaults in the testsuite that end up failing the tests in a background thread (in myapp) - checkInputs = [ pytestCheckHook pytest-cov ] ++ lib.optional (!stdenv.isDarwin) watchdog; + checkInputs = [ + pytestCheckHook + ] ++ lib.optional (!stdenv.isDarwin) [ + watchdog + ]; + + disabledTestPaths = [ + # Doesn't work with an exported home, RuntimeError: timeout waiting for change to file=/build/tmpgfn145cx + "tests/test_it.py" + ]; + + pythonImportsCheck = [ "hupper" ]; meta = with lib; { - description = "in-process file monitor / reloader for reloading your code automatically during development"; + description = "In-process file monitor/reloader for reloading your code automatically during development"; homepage = "https://github.com/Pylons/hupper"; license = licenses.mit; maintainers = with maintainers; [ ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hvac/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hvac/default.nix index f67b5de7ee..70cd9ca5ab 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hvac/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hvac/default.nix @@ -1,15 +1,25 @@ -{ lib, buildPythonPackage, fetchPypi, requests, six }: +{ lib +, buildPythonPackage +, fetchPypi +, pyhcl +, requests +, six +}: buildPythonPackage rec { pname = "hvac"; - version = "0.10.8"; + version = "0.10.14"; src = fetchPypi { inherit pname version; - sha256 = "cd74138994b1b99cdb75d34aadfd900352b3170bfc31c5e4cc0ff63eaa731cf9"; + sha256 = "sha256-DGFvKdZkKtqrzUCKBEaTdO2DvhKyRQG7M36PN7rf7yI="; }; - propagatedBuildInputs = [ requests six ]; + propagatedBuildInputs = [ + pyhcl + requests + six + ]; # Requires running a Vault server doCheck = false; @@ -20,5 +30,6 @@ buildPythonPackage rec { description = "HashiCorp Vault API client"; homepage = "https://github.com/ianunruh/hvac"; license = licenses.asl20; + maintainers = with maintainers; [ ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hvplot/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hvplot/default.nix index c5fb601ea4..e0d2500bd5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hvplot/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hvplot/default.nix @@ -18,11 +18,11 @@ buildPythonPackage rec { pname = "hvplot"; - version = "0.7.1"; + version = "0.7.2"; src = fetchPypi { inherit pname version; - sha256 = "cdb61183d3cdb1296c7f63c6aab59ee72b7b79b9ddc18abce2ebd3214e8de9db"; + sha256 = "f0dcfcb5e46ae3c29a646c341435986e332ef38af1057bf7b76abadff0bbaca4"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hyperframe/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hyperframe/default.nix index 6cdee9948b..d10ecc6c07 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hyperframe/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hyperframe/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "hyperframe"; - version = "6.0.0"; + version = "6.0.1"; src = fetchPypi { inherit pname version; - sha256 = "742d2a4bc3152a340a49d59f32e33ec420aa8e7054c1444ef5c7efff255842f1"; + sha256 = "ae510046231dc8e9ecb1a6586f63d2347bf4c8905914aa84ba585ae85f28a914"; }; checkInputs = [ pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/hypothesis/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/hypothesis/default.nix index e956cb9cc4..35f53864eb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/hypothesis/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/hypothesis/default.nix @@ -18,14 +18,14 @@ buildPythonPackage rec { # If you need these, you can just add them to your environment. pname = "hypothesis"; - version = "5.49.0"; + version = "6.14.0"; # Use github tarballs that includes tests src = fetchFromGitHub { owner = "HypothesisWorks"; repo = "hypothesis-python"; rev = "hypothesis-python-${version}"; - sha256 = "1lr9a93vdx70s9i1zazazif5hy8fbqhvwqq402ygpf53yw4lgi2w"; + sha256 = "0yns81j3fnpdfaphk722xcnidqhgy0kmd7ik6aw7l795l0wivhxj"; }; postUnpack = "sourceRoot=$sourceRoot/hypothesis-python"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ibm-cloud-sdk-core/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ibm-cloud-sdk-core/default.nix index 828f51ae28..973b792f5b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ibm-cloud-sdk-core/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ibm-cloud-sdk-core/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "ibm-cloud-sdk-core"; - version = "3.9.0"; + version = "3.10.0"; src = fetchPypi { inherit pname version; - sha256 = "1gwx0z6yqlym9af6wnzq5alcrx8pfsywxn18a0yxhm1j00rkyh2i"; + sha256 = "ab9520be99066ec41a24e31ac653c28953adc8fc349f0fa53a598e1802a79cd6"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ibm-watson/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ibm-watson/default.nix index fe8756fde0..7684f1a689 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ibm-watson/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ibm-watson/default.nix @@ -8,19 +8,19 @@ , tox , requests , python-dateutil -, websocket_client +, websocket-client , ibm-cloud-sdk-core }: buildPythonPackage rec { pname = "ibm-watson"; - version = "5.1.0"; + version = "5.2.0"; src = fetchFromGitHub { owner = "watson-developer-cloud"; repo = "python-sdk"; rev = "v${version}"; - sha256 = "sha256:16llw7kybwndgf2ryrg5698v4j3rhrdx52lf3kdzhxdi0q3kmwdn"; + sha256 = "1abink5mv9nw506nwm9hlvnr1lq6dkxxj2j12iwphcyd7xs63n2s"; }; checkInputs = [ @@ -34,7 +34,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ requests python-dateutil - websocket_client + websocket-client ibm-cloud-sdk-core ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/idasen/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/idasen/default.nix new file mode 100644 index 0000000000..d1bacfbe82 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/idasen/default.nix @@ -0,0 +1,50 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, bleak +, pyyaml +, voluptuous +, pytestCheckHook +, pytest-asyncio +, poetry-core +}: + +buildPythonPackage rec { + pname = "idasen"; + version = "0.7.1"; + format = "pyproject"; + + disabled = pythonOlder "3.8"; + + src = fetchFromGitHub { + owner = "newAM"; + repo = "idasen"; + rev = "v${version}"; + sha256 = "1jdgdby33fd63mnxrfv04dz4fsrikkfmc0ybwwxi816mbkml7n34"; + }; + + nativeBuildInputs = [ + poetry-core + ]; + + propagatedBuildInputs = [ + bleak + pyyaml + voluptuous + ]; + + checkInputs = [ + pytestCheckHook + pytest-asyncio + ]; + + pythonImportsCheck = [ "idasen" ]; + + meta = with lib; { + description = "Python API and CLI for the ikea IDÅSEN desk"; + homepage = "https://github.com/newAM/idasen"; + license = licenses.mit; + maintainers = with maintainers; [ newam ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/idna/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/idna/default.nix index 9bb639f95d..cb8636f135 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/idna/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/idna/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "idna"; - version = "3.1"; + version = "3.2"; src = fetchPypi { inherit pname version; - sha256 = "c5b02147e01ea9920e6b0a3f1f7bb833612d507592c837a6c49552768f4054e1"; + sha256 = "467fbad99067910785144ce333826c71fb0e63a425657295239737f7ecd125f3"; }; checkInputs = [ pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ignite/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ignite/default.nix index f745b735f3..b82fe568e2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ignite/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ignite/default.nix @@ -14,13 +14,13 @@ buildPythonPackage rec { pname = "ignite"; - version = "0.4.4.post1"; + version = "0.4.5"; src = fetchFromGitHub { owner = "pytorch"; repo = pname; rev = "v${version}"; - sha256 = "1a7vs4dzm5lmyck50ygi3j2d2wd6nxr5x91dpx0rmf97i6lywpyb"; + sha256 = "057v8v5p2picmgiidr9lzjbh7nj54pv95m6lyya3y7dw4vzaamij"; }; checkInputs = [ pytestCheckHook matplotlib mock pytest_xdist ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/imageio-ffmpeg/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/imageio-ffmpeg/default.nix index bb186d6594..9d1755d81b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/imageio-ffmpeg/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/imageio-ffmpeg/default.nix @@ -9,13 +9,13 @@ buildPythonPackage rec { pname = "imageio-ffmpeg"; - version = "0.4.3"; + version = "0.4.4"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "f826260a3207b872f1a4ba87ec0c8e02c00afba4fd03348a59049bdd8215841e"; + sha256 = "73640a7a54f95e607addd637c766d56be31d975a64ddb97d14df012575ef1a5d"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/imap-tools/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/imap-tools/default.nix index 75de29b233..5d4e41c5e5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/imap-tools/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/imap-tools/default.nix @@ -7,7 +7,7 @@ buildPythonPackage rec { pname = "imap-tools"; - version = "0.41.0"; + version = "0.42.0"; disabled = isPy27; @@ -15,7 +15,7 @@ buildPythonPackage rec { owner = "ikvk"; repo = "imap_tools"; rev = "v${version}"; - sha256 = "sha256-gtfVZTHeiYamKkcu9n/CJ4O4X1YneY2QB3XZnvtNL3U="; + sha256 = "sha256-WNhhQ3iqqwyYyd+iOQVpsKAAfgJwJBaUR7rmYAEYUxw="; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/imaplib2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/imaplib2/default.nix index 1825e1a40d..c58b698a4a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/imaplib2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/imaplib2/default.nix @@ -1,22 +1,33 @@ -{ lib, buildPythonPackage, fetchPypi }: +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, pytestCheckHook +}: buildPythonPackage rec { pname = "imaplib2"; - version = "2.45.0"; + version = "3.6"; - src = fetchPypi { - inherit pname version; - sha256 = "a35b6d88258696e80aabecfb784e08730b8558fcaaa3061ff2c7f8637afbd0b3"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "jazzband"; + repo = "imaplib2"; + rev = "v${version}"; + sha256 = "14asi3xnvf4bb394k5j8c3by6svvmrr75pawzy6kaax5jx0h793m"; }; - # No tests on PyPI and no tags on GitHub :( - doCheck = false; + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "imaplib2" ]; meta = with lib; { description = "A threaded Python IMAP4 client"; - homepage = "https://github.com/bcoe/imaplib2"; - # See https://github.com/bcoe/imaplib2/issues/25 - license = licenses.psfl; + homepage = "https://github.com/jazzband/imaplib2"; + license = licenses.mit; maintainers = with maintainers; [ dotlambda ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/imgaug/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/imgaug/default.nix index 343c7869a6..ab3cdd6e6d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/imgaug/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/imgaug/default.nix @@ -4,7 +4,7 @@ , imagecorruptions , numpy , opencv3 -, pytest +, pytestCheckHook , scikitimage , scipy , shapely @@ -43,11 +43,30 @@ buildPythonPackage rec { six ]; - checkPhase = '' - pytest ./test - ''; + checkInputs = [ + opencv3 + pytestCheckHook + ]; - checkInputs = [ opencv3 pytest ]; + disabledTests = [ + # Tests are outdated + "test_quokka_segmentation_map" + "test_pool" + "test_avg_pool" + "test_max_pool" + "test_min_pool" + "est_median_pool" + "test_alpha_is_080" + "test_face_and_lines_at_half_visibility" + "test_polygon_fully_inside_image__no_rectangular_shape" + ]; + + disabledTestPaths = [ + # TypeError: int() argument must be a string, a bytes-like object or a number, not 'NoneType' + "test/augmenters/test_pooling.py" + ]; + + pythonImportsCheck = [ "imgaug" ]; meta = with lib; { homepage = "https://github.com/aleju/imgaug"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/iminuit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/iminuit/default.nix index 5bfb66fe4c..42a1d7c4ff 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/iminuit/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/iminuit/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "iminuit"; - version = "2.4.0"; + version = "2.6.1"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "350c13d33f3ec5884335aea1cc11a17ae49dd8e6b2181c3f1b3c9c27e2e0b228"; + sha256 = "5fb8786bcad53762648ddacb008d18b49704ba5c011ade240004bfc5a628b4f6"; }; nativeBuildInputs = [ cmake ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/impacket/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/impacket/default.nix index 15d148f168..71f932ebe9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/impacket/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/impacket/default.nix @@ -1,15 +1,15 @@ -{ lib, buildPythonPackage, fetchPypi, flask, ldapdomaindump, pycryptodomex, pyasn1, pyopenssl }: +{ lib, buildPythonPackage, fetchPypi, flask, ldapdomaindump, pycryptodomex, pyasn1, pyopenssl, chardet }: buildPythonPackage rec { pname = "impacket"; - version = "0.9.22"; + version = "0.9.23"; src = fetchPypi { inherit pname version; - sha256 = "4bf7e7b595356585599b4b2773b8a463d7b9765c97012dcd5a44eb6d547f6a1d"; + sha256 = "1c1be8a50cdbe3cffc566ba64f552b1b28bcc79b7a406b833956b49c56d77184"; }; - propagatedBuildInputs = [ flask ldapdomaindump pycryptodomex pyasn1 pyopenssl ]; + propagatedBuildInputs = [ flask ldapdomaindump pycryptodomex pyasn1 pyopenssl chardet ]; # fail with: # RecursionError: maximum recursion depth exceeded @@ -18,7 +18,7 @@ buildPythonPackage rec { meta = with lib; { description = "Network protocols Constructors and Dissectors"; - homepage = "https://github.com/CoreSecurity/impacket"; + homepage = "https://github.com/SecureAuthCorp/impacket"; # Modified Apache Software License, Version 1.1 license = licenses.free; maintainers = with maintainers; [ SuperSandro2000 ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/importlib-metadata/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/importlib-metadata/default.nix index 4149de3f43..d430c4cf29 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/importlib-metadata/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/importlib-metadata/default.nix @@ -10,13 +10,13 @@ buildPythonPackage rec { pname = "importlib-metadata"; - version = "3.7.3"; + version = "4.0.1"; disabled = pythonOlder "3.6"; src = fetchPypi { pname = "importlib_metadata"; inherit version; - sha256 = "742add720a20d0467df2f444ae41704000f50e1234f46174b51f9c6031a1bd71"; + sha256 = "sha256-jFARluSfud9d9DgzvbHkMo9khHdj7IpQcDFItzeE1YE="; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/imread/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/imread/default.nix index 3d09e6a439..9d5ea1bebd 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/imread/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/imread/default.nix @@ -12,12 +12,12 @@ buildPythonPackage rec { pname = "python-imread"; - version = "0.7.0"; + version = "0.7.4"; src = fetchPypi { inherit version; pname = "imread"; - sha256 = "0yb0fmy6ilh5fvbk69wl2bzqgss2g0951668mx8z9yyj4jhr1z2y"; + sha256 = "0kvlpy62vc16i0mysv1b2gv746in41q75hb815q6h8d227psv1q4"; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/inflect/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/inflect/default.nix index f81ceabd27..9081a30ac6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/inflect/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/inflect/default.nix @@ -28,5 +28,6 @@ buildPythonPackage rec { homepage = "https://github.com/jaraco/inflect"; changelog = "https://github.com/jaraco/inflect/blob/v${version}/CHANGES.rst"; license = licenses.mit; + maintainers = teams.tts.members; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/influxdb-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/influxdb-client/default.nix index 38f6f58910..21e614d7d7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/influxdb-client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/influxdb-client/default.nix @@ -14,14 +14,14 @@ buildPythonPackage rec { pname = "influxdb-client"; - version = "1.17.0"; + version = "1.18.0"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "influxdata"; repo = "influxdb-client-python"; rev = "v${version}"; - sha256 = "1xxg8z9zambbhr7nmxhmvmiwkd4578zxr6rl2vhdh2w77idsw29z"; + sha256 = "0xgp1wxdfa4y316dfkpmj38chlh68mndr8kqphckpnw16qxsl3d9"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/inform/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/inform/default.nix index 7646d25ee4..86bad819a6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/inform/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/inform/default.nix @@ -9,13 +9,13 @@ buildPythonPackage rec { pname = "inform"; - version = "1.23"; + version = "1.24"; src = fetchFromGitHub { owner = "KenKundert"; repo = "inform"; rev = "v${version}"; - sha256 = "02zlprvidkz51aypss4knhv7dbr0sbpz3caqjzf9am2n1jx2viyy"; + sha256 = "114cyff00j9r7qm2ld4w1a4kklr5gx570vk67p56gpr2553dkmly"; }; nativeBuildInputs = [ pytestrunner ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/injector/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/injector/default.nix new file mode 100644 index 0000000000..921db5d1a8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/injector/default.nix @@ -0,0 +1,23 @@ +{ lib, buildPythonPackage, fetchPypi, typing-extensions }: + +buildPythonPackage rec { + pname = "injector"; + version = "0.18.4"; + + src = fetchPypi { + inherit pname version; + sha256 = "10miwi58g4b8rvdf1pl7s7x9j91qyxxv3kdn5idzkfc387hqxn6f"; + }; + + propagatedBuildInputs = [ typing-extensions ]; + + doCheck = false; # No tests are available + pythonImportsCheck = [ "injector" ]; + + meta = with lib; { + description = "Python dependency injection framework, inspired by Guice"; + homepage = "https://github.com/alecthomas/injector"; + maintainers = [ maintainers.ivar ]; + license = licenses.bsd3; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/inkex/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/inkex/default.nix new file mode 100644 index 0000000000..c1c5479dfd --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/inkex/default.nix @@ -0,0 +1,41 @@ +{ buildPythonPackage +, inkscape +, lxml +, python +}: + +buildPythonPackage { + pname = "inkex"; + inherit (inkscape) version; + + format = "other"; + + propagatedBuildInputs = [ + lxml + ]; + + # We just copy the files. + dontUnpack = true; + dontBuild = true; + + # No tests installed. + doCheck = false; + + installPhase = '' + runHook preInstall + + mkdir -p "$out/${python.sitePackages}" + cp -r "${inkscape}/share/inkscape/extensions/inkex" "$out/${python.sitePackages}" + + runHook postInstall + ''; + + meta = inkscape.meta // { + description = "Inkscape Extensions Library"; + longDescription = '' + This module provides support for inkscape extensions, it includes support for opening svg files and processing them. + + Standalone, it is especially useful for running tests for Inkscape extensions. + ''; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/intake/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/intake/default.nix index 41207295a2..fff6d74b56 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/intake/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/intake/default.nix @@ -73,6 +73,7 @@ buildPythonPackage rec { # broken test "test_read_pattern" + "test_remote_arr" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ipdb/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ipdb/default.nix index fbdfd5b790..363c8a4f57 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ipdb/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ipdb/default.nix @@ -3,21 +3,21 @@ , fetchPypi , ipython , isPyPy -, isPy27 , mock +, toml }: buildPythonPackage rec { pname = "ipdb"; - version = "0.13.7"; - disabled = isPyPy || isPy27; # setupterm: could not find terminfo database + version = "0.13.9"; + disabled = isPyPy; # setupterm: could not find terminfo database src = fetchPypi { inherit pname version; - sha256 = "178c367a61c1039e44e17c56fcc4a6e7dc11b33561261382d419b6ddb4401810"; + sha256 = "951bd9a64731c444fd907a5ce268543020086a697f6be08f7cc2c9a752a278c5"; }; - propagatedBuildInputs = [ ipython ]; + propagatedBuildInputs = [ ipython toml ]; checkInputs = [ mock ]; preCheck = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ipydatawidgets/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ipydatawidgets/default.nix index e6e1e605cc..a0efa9b575 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ipydatawidgets/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ipydatawidgets/default.nix @@ -13,13 +13,13 @@ buildPythonPackage rec { pname = "ipydatawidgets"; - version = "4.1.0"; + version = "4.2.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "d9f94828c11e3b40350fb14a02e027f42670a7c372bcb30db18d552dcfab7c01"; + sha256 = "d0e4b58b59b508165e8562b8f5d1dbfcd739855847ec0477bd9185a5e9b7c5bc"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ipykernel/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ipykernel/default.nix index 98944d2543..0d44c40634 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ipykernel/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ipykernel/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "ipykernel"; - version = "5.5.0"; + version = "5.5.5"; src = fetchPypi { inherit pname version; - sha256 = "98321abefdf0505fb3dc7601f60fc4087364d394bd8fad53107eb1adee9ff475"; + sha256 = "e976751336b51082a89fc2099fb7f96ef20f535837c398df6eab1283c2070884"; }; propagatedBuildInputs = [ ipython jupyter_client traitlets tornado ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ipython/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ipython/default.nix index d9447e9138..cd68bb62a1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ipython/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ipython/default.nix @@ -11,6 +11,7 @@ # Runtime dependencies , jedi , decorator +, matplotlib-inline , pickleshare , traitlets , prompt_toolkit @@ -22,12 +23,12 @@ buildPythonPackage rec { pname = "ipython"; - version = "7.21.0"; + version = "7.24.1"; disabled = pythonOlder "3.7"; src = fetchPypi { inherit pname version; - sha256 = "04323f72d5b85b606330b6d7e2dc8d2683ad46c3905e955aa96ecc7a99388e70"; + sha256 = "9bc24a99f5d19721fb8a2d1408908e9c0520a17fff2233ffe82620847f17f1b6"; }; prePatch = lib.optionalString stdenv.isDarwin '' @@ -41,6 +42,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ jedi decorator + matplotlib-inline pickleshare traitlets prompt_toolkit diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ipyvuetify/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ipyvuetify/default.nix index b581c49d43..280ba747df 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ipyvuetify/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ipyvuetify/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "ipyvuetify"; - version = "1.6.2"; + version = "1.7.0"; # GitHub version tries to run npm (Node JS) src = fetchPypi { inherit pname version; - sha256 = "056776d359b55343442f707cb4ccd5607800599a36bee06e1f01ef0277f03ddc"; + sha256 = "ea951e3819fcfe8a2ba0a0fe8a51f07b01dca7986eaf57f1840b3c71848cc7c3"; }; propagatedBuildInputs = [ ipyvue ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ismartgate/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ismartgate/default.nix new file mode 100644 index 0000000000..594764bae0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/ismartgate/default.nix @@ -0,0 +1,60 @@ +{ lib +, asynctest +, buildPythonPackage +, click +, defusedxml +, dicttoxml +, fetchFromGitHub +, httpx +, pycryptodome +, pytest-asyncio +, pytest-raises +, pytestCheckHook +, pythonOlder +, respx +, typing-extensions +}: + +buildPythonPackage rec { + pname = "ismartgate"; + version = "4.0.1"; + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "bdraco"; + repo = pname; + rev = "v${version}"; + sha256 = "1kxlcjnppsk8m93gfcpy3asig1frhp1k5rfqx3rszhkcxmni95m2"; + }; + + propagatedBuildInputs = [ + click + defusedxml + dicttoxml + httpx + pycryptodome + typing-extensions + ]; + + checkInputs = [ + asynctest + pytest-asyncio + pytest-raises + pytestCheckHook + respx + ]; + + postPatch = '' + substituteInPlace setup.py \ + --replace '"pytest-runner>=5.2",' "" + ''; + + pythonImportsCheck = [ "ismartgate" ]; + + meta = with lib; { + description = "Python module to work with the ismartgate and gogogate2 API"; + homepage = "https://github.com/bdraco/ismartgate"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/itemloaders/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/itemloaders/default.nix index 107585f041..e609820803 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/itemloaders/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/itemloaders/default.nix @@ -1,7 +1,7 @@ { lib , buildPythonPackage , fetchFromGitHub -, isPy27 +, pythonOlder , w3lib , parsel , jmespath @@ -12,8 +12,7 @@ buildPythonPackage rec { pname = "itemloaders"; version = "1.0.4"; - - disabled = isPy27; + disabled = pythonOlder "3.6"; # Tests not included in PyPI tarball src = fetchFromGitHub { @@ -27,6 +26,14 @@ buildPythonPackage rec { checkInputs = [ pytestCheckHook ]; + disabledTests = [ + # Test are failing (AssertionError: Lists differ: ...) + "test_nested_css" + "test_nested_xpath" + ]; + + pythonImportsCheck = [ "itemloaders" ]; + meta = with lib; { description = "Base library for scrapy's ItemLoader"; homepage = "https://github.com/scrapy/itemloaders"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/iterm2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/iterm2/default.nix index da44563208..3b98f25c56 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/iterm2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/iterm2/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "iterm2"; - version = "1.19"; + version = "1.21"; src = fetchPypi { inherit pname version; - sha256 = "04fad95b2258135814677317529654ab0de92b0a4576e4410689181a6a535805"; + sha256 = "06be59e0314a2f0f32753eb2d44eb563e85253875bc8da64df5b4eeba7fc05bd"; }; propagatedBuildInputs = [ protobuf websockets ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/itsdangerous/1.nix b/third_party/nixpkgs/pkgs/development/python-modules/itsdangerous/1.nix new file mode 100644 index 0000000000..d1669a1ed5 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/itsdangerous/1.nix @@ -0,0 +1,21 @@ +{ lib +, buildPythonPackage +, fetchPypi +}: + +buildPythonPackage rec { + pname = "itsdangerous"; + version = "1.1.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "321b033d07f2a4136d3ec762eac9f16a10ccd60f53c0c91af90217ace7ba1f19"; + }; + + meta = with lib; { + description = "Helpers to pass trusted data to untrusted environments and back"; + homepage = "https://pypi.python.org/pypi/itsdangerous/"; + license = licenses.bsd0; + }; + +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/itsdangerous/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/itsdangerous/default.nix index d1669a1ed5..35cdf8836a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/itsdangerous/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/itsdangerous/default.nix @@ -1,21 +1,30 @@ { lib , buildPythonPackage +, pythonOlder , fetchPypi +, freezegun +, pytestCheckHook }: buildPythonPackage rec { pname = "itsdangerous"; - version = "1.1.0"; + version = "2.0.1"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "321b033d07f2a4136d3ec762eac9f16a10ccd60f53c0c91af90217ace7ba1f19"; + sha256 = "1w6gfb2zhbcmrfj6digwzw1z68w6zg1q87rm6la2m412zil4swly"; }; + checkInputs = [ + freezegun + pytestCheckHook + ]; + meta = with lib; { - description = "Helpers to pass trusted data to untrusted environments and back"; - homepage = "https://pypi.python.org/pypi/itsdangerous/"; - license = licenses.bsd0; + description = "Safely pass data to untrusted environments and back"; + homepage = "https://itsdangerous.palletsprojects.com"; + license = licenses.bsd3; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/itunespy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/itunespy/default.nix new file mode 100644 index 0000000000..4720101d81 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/itunespy/default.nix @@ -0,0 +1,27 @@ +{ lib, buildPythonPackage, fetchFromGitHub, requests, pycountry, mypy }: + +buildPythonPackage rec { + pname = "itunespy"; + version = "1.6"; + + src = fetchFromGitHub { + owner = "sleepyfran"; + repo = pname; + rev = version; + sha256 = "0yc3az5531qs8nbcw4rhgrszwczgy4bikfwfar7xb2044360sslw"; + }; + + propagatedBuildInputs = [ requests pycountry mypy ]; + + # This module has no tests + doCheck = false; + + pythonImportsCheck = [ "itunespy" ]; + + meta = with lib; { + description = "A simple library to fetch data from the iTunes Store API"; + homepage = "https://github.com/sleepyfran/itunespy"; + license = licenses.mit; + maintainers = with maintainers; [ j0hax ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jaraco_collections/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jaraco_collections/default.nix index 17bb30e135..060d459381 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jaraco_collections/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jaraco_collections/default.nix @@ -4,10 +4,10 @@ buildPythonPackage rec { pname = "jaraco.collections"; - version = "3.2.0"; + version = "3.3.0"; src = fetchPypi { inherit pname version; - sha256 = "6d179770493c4f5802395ae5a29e07c66d826dc3cd680ad0b0f0fb9fd6cdf533"; + sha256 = "3662267424b55f10bf15b6f5dee6a6e48a2865c0ec50cc7a16040c81c55a98dc"; }; pythonNamespaces = [ "jaraco" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jaraco_functools/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jaraco_functools/default.nix index 534b18764f..1fca58ebf7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jaraco_functools/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jaraco_functools/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "jaraco.functools"; - version = "3.2.1"; + version = "3.3.0"; src = fetchPypi { inherit pname version; - sha256 = "97cf88b46ab544c266e2d81fa17bb183622268722a7dd1a3711ea426e9c26f94"; + sha256 = "bfcf7da71e2a0e980189b0744b59dba6c1dcf66dcd7a30f8a4413e478046b314"; }; nativeBuildInputs = [ setuptools-scm toml ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/javaobj-py3/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/javaobj-py3/default.nix index 421b63a664..ecdc0b82a7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/javaobj-py3/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/javaobj-py3/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "javaobj-py3"; - version = "0.4.2"; + version = "0.4.3"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "sha256-7Tsf/P058WVynLU1h8ygKrC/pMMyyDepLV/+au9cgBA="; + sha256 = "38f74db3a57e9998a9774e3614afb95cb396f139f29b3fdb130c5af554435259"; }; propagatedBuildInputs = [ numpy ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jc/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jc/default.nix index 61c9e85ced..10f09d912e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jc/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jc/default.nix @@ -10,14 +10,14 @@ buildPythonPackage rec { pname = "jc"; - version = "1.14.4"; + version = "1.15.4"; disabled = isPy27; src = fetchFromGitHub { owner = "kellyjonbrazil"; repo = "jc"; rev = "v${version}"; - sha256 = "sha256-RJiJByORpdMWZkA7q7A+WoV4S/UcOP/VZ5TVxFMLYSg="; + sha256 = "1y3807i9rlif78qp1vq9n5hpzmc60i9h5ycw70gvf8mgzxxrl8jx"; }; propagatedBuildInputs = [ ruamel_yaml xmltodict pygments ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jeepney/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jeepney/default.nix index 84096c6db4..cea428a9ff 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jeepney/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jeepney/default.nix @@ -2,9 +2,11 @@ , buildPythonPackage , fetchPypi , pythonOlder +, dbus , pytest +, pytest-trio +, pytest-asyncio , testpath -, tornado , trio }: @@ -12,30 +14,44 @@ buildPythonPackage rec { pname = "jeepney"; version = "0.6.0"; - disabled = pythonOlder "3.5"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; sha256 = "7d59b6622675ca9e993a6bd38de845051d315f8b0c72cca3aef733a20b648657"; }; - propagatedBuildInputs = [ - tornado - ]; - checkInputs = [ + dbus pytest + pytest-trio + pytest-asyncio testpath trio ]; checkPhase = '' - pytest + runHook preCheck + + dbus-run-session --config-file=${dbus}/share/dbus-1/session.conf -- pytest + + runHook postCheck ''; + pythonImportsCheck = [ + "jeepney" + "jeepney.auth" + "jeepney.io" + "jeepney.io.asyncio" + "jeepney.io.blocking" + "jeepney.io.threading" + "jeepney.io.trio" + ]; + meta = with lib; { homepage = "https://gitlab.com/takluyver/jeepney"; description = "Pure Python DBus interface"; license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jellyfin-apiclient-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jellyfin-apiclient-python/default.nix index 84ea65a747..ca96e63060 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jellyfin-apiclient-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jellyfin-apiclient-python/default.nix @@ -1,5 +1,11 @@ -{ lib, buildPythonPackage, fetchPypi, requests -, websocket_client, pythonOlder }: +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, requests +, six +, websocket-client +}: buildPythonPackage rec { pname = "jellyfin-apiclient-python"; @@ -11,7 +17,11 @@ buildPythonPackage rec { sha256 = "sha256-nSLUa9/jAT6XrHo77kV5HYBxPO/lhcWKqPfpES7ul9A="; }; - propagatedBuildInputs = [ requests websocket_client ]; + propagatedBuildInputs = [ + requests + six + websocket-client + ]; doCheck = false; # no tests pythonImportsCheck = [ "jellyfin_apiclient_python" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jieba/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jieba/default.nix index b515cd92b2..8b7146ebef 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jieba/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jieba/default.nix @@ -29,5 +29,6 @@ buildPythonPackage rec { description = "Chinese Words Segementation Utilities"; homepage = "https://github.com/fxsjy/jieba"; license = licenses.mit; + maintainers = teams.tts.members; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jinja2/2.nix b/third_party/nixpkgs/pkgs/development/python-modules/jinja2/2.nix new file mode 100644 index 0000000000..dce93d33ab --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/jinja2/2.nix @@ -0,0 +1,41 @@ +{ lib, stdenv +, buildPythonPackage +, isPy3k +, fetchPypi +, pytest +, markupsafe +, setuptools +}: + +buildPythonPackage rec { + pname = "Jinja2"; + version = "2.11.3"; + + src = fetchPypi { + inherit pname version; + sha256 = "a6d58433de0ae800347cab1fa3043cebbabe8baa9d29e668f1c768cb87a333c6"; + }; + + checkInputs = [ pytest ]; + propagatedBuildInputs = [ markupsafe setuptools ]; + + # Multiple tests run out of stack space on 32bit systems with python2. + # See https://github.com/pallets/jinja/issues/1158 + doCheck = !stdenv.is32bit || isPy3k; + + checkPhase = '' + pytest -v tests + ''; + + meta = with lib; { + homepage = "http://jinja.pocoo.org/"; + description = "Stand-alone template engine"; + license = licenses.bsd3; + longDescription = '' + Jinja2 is a template engine written in pure Python. It provides a + Django inspired non-XML syntax but supports inline expressions and + an optional sandboxed environment. + ''; + maintainers = with maintainers; [ pierron sjourdois ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jinja2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jinja2/default.nix index dce93d33ab..d54372379b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jinja2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jinja2/default.nix @@ -1,39 +1,44 @@ -{ lib, stdenv +{ lib +, stdenv , buildPythonPackage -, isPy3k +, pythonOlder , fetchPypi -, pytest +, Babel , markupsafe -, setuptools +, pytestCheckHook }: buildPythonPackage rec { pname = "Jinja2"; - version = "2.11.3"; + version = "3.0.1"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "a6d58433de0ae800347cab1fa3043cebbabe8baa9d29e668f1c768cb87a333c6"; + sha256 = "197ms1wimxql650245v63wkv04n8bicj549wfhp51bx68x5lhgvh"; }; - checkInputs = [ pytest ]; - propagatedBuildInputs = [ markupsafe setuptools ]; + propagatedBuildInputs = [ + Babel + markupsafe + ]; # Multiple tests run out of stack space on 32bit systems with python2. # See https://github.com/pallets/jinja/issues/1158 - doCheck = !stdenv.is32bit || isPy3k; + doCheck = !stdenv.is32bit; - checkPhase = '' - pytest -v tests - ''; + checkInputs = [ + pytestCheckHook + ]; meta = with lib; { homepage = "http://jinja.pocoo.org/"; description = "Stand-alone template engine"; license = licenses.bsd3; longDescription = '' - Jinja2 is a template engine written in pure Python. It provides a - Django inspired non-XML syntax but supports inline expressions and + Jinja is a fast, expressive, extensible templating engine. Special + placeholders in the template allow writing code similar to Python + syntax. Then the template is passed data to render the final document. an optional sandboxed environment. ''; maintainers = with maintainers; [ pierron sjourdois ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jsbeautifier/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jsbeautifier/default.nix index 09eb45f964..a0818e1e57 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jsbeautifier/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jsbeautifier/default.nix @@ -2,14 +2,14 @@ buildPythonApplication rec { pname = "jsbeautifier"; - version = "1.13.5"; + version = "1.14.0"; propagatedBuildInputs = [ six editorconfig ]; checkInputs = [ pytest ]; src = fetchPypi { inherit pname version; - sha256 = "4532a6bc85ba91ffc542b55d65cd13cedc971a934f26f51ed56d4c680b3fbe66"; + sha256 = "84fdb008d8af89619269a6aca702288b48f837a99427a0f529aa57ecfb36ee3c"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/json-schema-for-humans/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/json-schema-for-humans/default.nix index 4e762e456c..8df7d6f6e0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/json-schema-for-humans/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/json-schema-for-humans/default.nix @@ -1,35 +1,65 @@ -{ lib, buildPythonPackage, fetchFromGitHub -, pbr, click, dataclasses-json, htmlmin, jinja2, markdown2, pygments, pytz, pyyaml, requests, pytestCheckHook, beautifulsoup4, tox +{ lib +, beautifulsoup4 +, buildPythonPackage +, click +, dataclasses-json +, fetchFromGitHub +, htmlmin +, jinja2 +, markdown2 +, pbr +, pygments +, pytestCheckHook +, pytz +, pyyaml +, requests }: buildPythonPackage rec { pname = "json-schema-for-humans"; - version = "0.27.1"; + version = "0.31.0"; src = fetchFromGitHub { owner = "coveooss"; repo = pname; rev = "v${version}"; - sha256 = "0d2a4a2lcqssr5g9rmc76f86nkqc9grixh507vzc9fi1h3gbi765"; + sha256 = "1aj1w0qxdw8d6mf5vngk0xjgs7z8vzwc2aycahnkqg7q3cagq19n"; }; nativeBuildInputs = [ pbr ]; + propagatedBuildInputs = [ - click dataclasses-json htmlmin jinja2 markdown2 - pygments pytz pyyaml requests + click + dataclasses-json + htmlmin + jinja2 + markdown2 + pygments + pytz + pyyaml + requests ]; preBuild = '' export PBR_VERSION=0.0.1 ''; - checkInputs = [ pytestCheckHook beautifulsoup4 ]; - pytestFlagsArray = [ "--ignore tests/generate_test.py" ]; + checkInputs = [ + beautifulsoup4 + pytestCheckHook + ]; + + disabledTests = [ + # Tests require network access + "test_references_url" + ]; + + pythonImportsCheck = [ "json_schema_for_humans" ]; meta = with lib; { description = "Quickly generate HTML documentation from a JSON schema"; - homepage = "https://github.com/coveooss/json-schema-for-humans"; - license = licenses.asl20; + homepage = "https://github.com/coveooss/json-schema-for-humans"; + license = licenses.asl20; maintainers = with maintainers; [ astro ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jsondiff/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jsondiff/default.nix index 2a622d913a..0b6f012098 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jsondiff/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jsondiff/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "jsondiff"; - version = "1.2.0"; + version = "1.3.0"; src = fetchPypi { inherit pname version; - sha256 = "00v3689175aqzdscrxpffm712ylp8jvcpqdg51ca22ni6721p51l"; + sha256 = "5122bf4708a031b02db029366184a87c5d0ddd5a327a5884ee6cf0193e599d71"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jsonrpc-base/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jsonrpc-base/default.nix index 008b181b9e..62fbf0130c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jsonrpc-base/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jsonrpc-base/default.nix @@ -1,21 +1,23 @@ { lib , buildPythonPackage , fetchFromGitHub +, pytest-asyncio , pytestCheckHook }: buildPythonPackage rec { pname = "jsonrpc-base"; - version = "2.0.0"; + version = "2.1.0"; src = fetchFromGitHub { owner = "emlove"; repo = pname; rev = version; - sha256 = "0xxhn0vb7mr8k1w9xbqhhyx9qkgkc318qkyflgfbvjc926n50680"; + sha256 = "1cd83m831ngck2v8m08pb2g29z4vr9iggi73l7h506v6clkb4n3y"; }; checkInputs = [ + pytest-asyncio pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jsonrpc-websocket/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jsonrpc-websocket/default.nix index faecca760d..530c08dbaa 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jsonrpc-websocket/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jsonrpc-websocket/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "jsonrpc-websocket"; - version = "3.0.0"; + version = "3.1.0"; src = fetchPypi { inherit pname version; - sha256 = "0fmw8xjzlhi7r84swn4w3njy389qqll5ad5ljdq5n2wpg424k98h"; + sha256 = "eeaaac2330f6f1cdafd378ddf5287a47a7c8609ab212a2f576121c1e61c7a344"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jsonrpclib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jsonrpclib/default.nix index d37b4ce3cc..b1b4648e90 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jsonrpclib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jsonrpclib/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "jsonrpclib"; - version = "0.1.7"; + version = "0.2.1"; disabled = isPy3k; src = fetchPypi { inherit pname version; - sha256 = "02vgirw2bcgvpcxhv5hf3yvvb4h5wzd1lpjx8na5psdmaffj6l3z"; + sha256 = "8138078fd0f2a5b1df7925e4fa0b82a7c17a4be75bf5634af20463172f44f5c0"; }; propagatedBuildInputs = [ cjson ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jsonstreams/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jsonstreams/default.nix index 9042498664..82152a8d11 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jsonstreams/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jsonstreams/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "jsonstreams"; - version = "0.5.0"; + version = "0.6.0"; src = fetchFromGitHub { owner = "dcbaker"; repo = pname; rev = version; - sha256 = "0c85fdqkj5k4b0v0ngx2d9qbmzdsvglh4j9k9h7508bvn7l8fa4b"; + sha256 = "0qw74wz9ngz9wiv89vmilbifsbvgs457yn1bxnzhrh7g4vs2wcav"; }; propagatedBuildInputs = [ six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/junos-eznc/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/junos-eznc/default.nix index 60ec37dbde..c98f20be52 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/junos-eznc/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/junos-eznc/default.nix @@ -18,13 +18,18 @@ buildPythonPackage rec { pname = "junos-eznc"; - version = "2.5.4"; + version = "2.6.1"; src = fetchPypi { inherit pname version; - sha256 = "bf036d0af9ee5c5e4f517cb5fc902fe891fa120e18f459805862c53d4a97193a"; + sha256 = "2f5de7dedaac8dd71bfea23c6a7d883e29947c91de1ba299a9242e0a4406ee46"; }; + postPatch = '' + substituteInPlace requirements.txt \ + --replace "ncclient==0.6.9" "ncclient" + ''; + checkInputs = [ nose ]; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jupyter-packaging/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jupyter-packaging/default.nix index da45616dfa..f6ea3fc610 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jupyter-packaging/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jupyter-packaging/default.nix @@ -10,13 +10,13 @@ buildPythonPackage rec { pname = "jupyter-packaging"; - version = "0.8.2"; + version = "0.10.2"; disabled = pythonOlder "3.7"; src = fetchPypi { pname = "jupyter_packaging"; inherit version; - sha256 = "sha256-ddzJDcFyY5Iida4QvpACh0FRBIy95IQHCEF5HQl5QbI="; + sha256 = "sha256-iEX0ht1IwWYM+tGOUJHRwDVA6y6fvzzs8h7LIrabh3A="; }; propagatedBuildInputs = [ deprecation packaging tomlkit ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jupyter_core/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jupyter_core/default.nix index cff5dc194a..cdd0485b68 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jupyter_core/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jupyter_core/default.nix @@ -1,6 +1,7 @@ { lib , buildPythonPackage , fetchPypi +, isPy3k , ipython , traitlets , glibcLocales @@ -12,6 +13,7 @@ buildPythonPackage rec { pname = "jupyter_core"; version = "4.7.1"; + disabled = !isPy3k; src = fetchPypi { inherit pname version; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jupyter_server/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jupyter_server/default.nix index f90c521b55..a8ae35e2bd 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jupyter_server/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jupyter_server/default.nix @@ -19,24 +19,20 @@ , terminado , prometheus_client , anyio +, websocket-client , requests }: buildPythonPackage rec { pname = "jupyter_server"; - version = "1.5.0"; + version = "1.8.0"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "ff127713a57ab7aa7b23f7df9b082951cc4b05d8d64cc0949d01ea02ac24c70c"; + sha256 = "8f0c75e0a577536125ad62a442ebb7cf02746f1a69d907e8a273c6225d281237"; }; - postPatch = '' - substituteInPlace setup.py \ - --replace "anyio>=2.0.2" "anyio" - ''; - propagatedBuildInputs = [ argon2_cffi jinja2 @@ -52,6 +48,7 @@ buildPythonPackage rec { terminado prometheus_client anyio + websocket-client ]; checkInputs = [ @@ -80,7 +77,7 @@ buildPythonPackage rec { __darwinAllowLocalNetworking = true; meta = with lib; { - description = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications."; + description = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications"; homepage = "https://github.com/jupyter-server/jupyter_server"; license = licenses.bsdOriginal; maintainers = [ maintainers.elohmeier ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab-git/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab-git/default.nix index 3219bd5730..67769e24b3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab-git/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab-git/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "jupyterlab_git"; - version = "0.23.3"; + version = "0.30.1"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "20a4954d8d1b1eb6f9111cd15d6a598bd7ff72b08797cf5e86c5a55827c85a1d"; + sha256 = "f44a33cf59b424e0b5ff984b18eae33e45dab1ef9dc1901b1dd23f9adff15df2"; }; propagatedBuildInputs = [ notebook nbdime git ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab/default.nix index ba2c0ed488..95ef213885 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "jupyterlab"; - version = "3.0.14"; + version = "3.0.16"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "sha256-cTqEmR38yowLwmCRHxvVSsJaOGqGKFcTuVVaYPeVBZs="; + sha256 = "7ad4fbe1f6d38255869410fd151a8b15692a663ca97c0a8146b3f5c40e275c23"; }; nativeBuildInputs = [ jupyter-packaging ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab_server/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab_server/default.nix index d5d1318ed6..7f1a729b5b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab_server/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jupyterlab_server/default.nix @@ -8,37 +8,51 @@ , pyjson5 , Babel , jupyter_server +, openapi-core , pytest-tornasync , pytestcov +, ruamel-yaml , strict-rfc3339 }: buildPythonPackage rec { pname = "jupyterlab_server"; - version = "2.3.0"; - disabled = pythonOlder "3.5"; + version = "2.6.0"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-56AkWqPeI6GAPeLv9AHkykWUU42fWYBhNPMEGabYtqM="; + sha256 = "f300adf6bb0a952bebe9c807a3b2a345d62da39b476b4f69ea0dc6b5f3f6b97d"; }; + postPatch = '' + sed -i "/^addopts/d" pyproject.toml + ''; + propagatedBuildInputs = [ requests jsonschema pyjson5 Babel jupyter_server ]; checkInputs = [ + openapi-core pytestCheckHook pytest-tornasync - pytestcov + ruamel-yaml strict-rfc3339 ]; + pytestFlagsArray = [ "--pyargs" "jupyterlab_server" ]; + disabledTests = [ - "test_get_locale" - "test_get_installed_language_pack_locales_passes" - "test_get_installed_package_locales" - "test_get_installed_packages_locale" - "test_get_language_packs" - "test_get_language_pack" + # AttributeError: 'SpecPath' object has no attribute 'paths' + "test_get_listing" + "test_get_settings" + "test_get_federated" + "test_listing" + "test_patch" + "test_patch_unicode" + "test_get_theme" + "test_delete" + "test_get_non_existant" + "test_get" ]; __darwinAllowLocalNetworking = true; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/jwcrypto/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/jwcrypto/default.nix index 42ed4cf879..182cfd0d48 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/jwcrypto/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/jwcrypto/default.nix @@ -2,19 +2,21 @@ , buildPythonPackage , fetchPypi , cryptography +, deprecated }: buildPythonPackage rec { pname = "jwcrypto"; - version = "0.8"; + version = "0.9.1"; src = fetchPypi { inherit pname version; - sha256 = "b7fee2635bbefdf145399392f5be26ad54161c8271c66b5fe107b4b452f06c24"; + sha256 = "63531529218ba9869e14ef8c9e7b516865ede3facf9b0ef3d3ba68014da211f9"; }; propagatedBuildInputs = [ cryptography + deprecated ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/kajiki/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/kajiki/default.nix index 471ee4416b..3f202bd51f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/kajiki/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/kajiki/default.nix @@ -4,20 +4,20 @@ , Babel , pytz , nine -, nose +, pytestCheckHook }: buildPythonPackage rec { - pname = "Kajiki"; - version = "0.8.2"; + pname = "kajiki"; + version = "0.8.3"; src = fetchPypi { inherit pname version; - sha256 = "bbec46b19285d42769d7c4f5a8a0195b72a62b54cd360a26a8875319d58efef6"; + sha256 = "c7a1f033b5cfaafa97bda5a475f58a7abcd76b348494995428fdcf6c8f648ad9"; }; propagatedBuildInputs = [ Babel pytz nine ]; - checkInputs = [ nose ]; + checkInputs = [ pytestCheckHook ]; meta = with lib; { description = "Kajiki provides fast well-formed XML templates"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/karton-dashboard/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/karton-dashboard/default.nix index 3ec455a8ac..c2251a0e23 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/karton-dashboard/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/karton-dashboard/default.nix @@ -27,7 +27,8 @@ buildPythonPackage rec { postPatch = '' substituteInPlace requirements.txt \ - --replace "Flask==1.1.1" "Flask" + --replace "Flask==1.1.1" "Flask" \ + --replace "prometheus_client==0.9.0" "prometheus-client" ''; # Project has no tests. pythonImportsCheck requires MinIO configuration diff --git a/third_party/nixpkgs/pkgs/development/python-modules/kmapper/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/kmapper/default.nix index 87f22172c4..630c025e09 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/kmapper/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/kmapper/default.nix @@ -15,13 +15,13 @@ buildPythonPackage rec { pname = "kmapper"; - version = "2.0.0"; + version = "2.0.1"; src = fetchFromGitHub { owner = "scikit-tda"; repo = "kepler-mapper"; rev = "v${version}"; - sha256 = "0djm27si2bn18khrbb7rwhflc5ma6g9smhikhk5i1apwn5avm6l4"; + sha256 = "1jqqrn7ig9kylcc8xbslxmchzghr9jgffaab3g3y3nyghk8azlgj"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/knack/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/knack/default.nix index 0b4c24afa4..5a05449e61 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/knack/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/knack/default.nix @@ -15,11 +15,11 @@ buildPythonPackage rec { pname = "knack"; - version = "0.8.0"; + version = "0.8.2"; src = fetchPypi { inherit pname version; - sha256 = "16aa47240add6badd933a0b27576f3c090d7469177dc941e3ece05ca88123199"; + sha256 = "4eaa50a1c5e79d1c5c8e5e1705b661721b0b83a089695e59e229cc26c64963b9"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/kombu/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/kombu/default.nix index a5ca1a7ab2..3ba2291da7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/kombu/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/kombu/default.nix @@ -1,40 +1,44 @@ -{ lib, buildPythonPackage, fetchPypi +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi , amqp -, botocore +, vine +, cached-property +, importlib-metadata +, azure-servicebus , case , Pyro4 -, pytest +, pytestCheckHook , pytz -, sqlalchemy -, importlib-metadata -, pythonOlder }: buildPythonPackage rec { pname = "kombu"; - version = "5.0.2"; + version = "5.1.0"; + + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "f4965fba0a4718d47d470beeb5d6446e3357a62402b16c510b6a2f251e05ac3c"; + sha256 = "01481d99f4606f6939cdc9b637264ed353ee9e3e4f62cfb582324142c41a572d"; }; - postPatch = '' - substituteInPlace requirements/test.txt \ - --replace "pytest-sugar" "" - ''; - propagatedBuildInputs = [ amqp + vine ] ++ lib.optionals (pythonOlder "3.8") [ + cached-property importlib-metadata ]; - checkInputs = [ botocore pytest case pytz Pyro4 sqlalchemy ]; - # test_redis requires fakeredis, which isn't trivial to package - checkPhase = '' - pytest --ignore t/unit/transport/test_redis.py - ''; + checkInputs = [ + azure-servicebus + case + Pyro4 + pytestCheckHook + pytz + ]; meta = with lib; { description = "Messaging library for Python"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/konnected/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/konnected/default.nix new file mode 100644 index 0000000000..b2117aab2d --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/konnected/default.nix @@ -0,0 +1,31 @@ +{ lib +, buildPythonPackage +, fetchPypi +, aiohttp +}: + +buildPythonPackage rec { + pname = "konnected"; + version = "1.2.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "b8b4e15c3228b01c9fad3651e09fea1654357ae8c333096e759a1b7d0eb4e789"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "konnected" ]; + + meta = with lib; { + description = "Async Python library for interacting with Konnected home automation controllers"; + homepage = "https://github.com/konnected-io/konnected-py"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/krakenex/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/krakenex/default.nix new file mode 100644 index 0000000000..bf907eb847 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/krakenex/default.nix @@ -0,0 +1,33 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, requests +}: + +buildPythonPackage rec { + pname = "krakenex"; + version = "2.1.0"; + + src = fetchFromGitHub { + owner = "veox"; + repo = "python3-krakenex"; + rev = "v${version}"; + sha256 = "0j8qmpk6lm57h80i5njhgvm1qnxllm18dlqxfd4kyxdb93si4z2p"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "krakenex" ]; + + meta = with lib; { + description = "Kraken.com cryptocurrency exchange API"; + homepage = "https://github.com/veox/python3-krakenex"; + license = licenses.lgpl3Plus; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/kubernetes/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/kubernetes/default.nix index f2cb598a6c..952527d5ca 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/kubernetes/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/kubernetes/default.nix @@ -1,5 +1,5 @@ { lib, buildPythonPackage, fetchPypi, pythonAtLeast, - ipaddress, websocket_client, urllib3, pyyaml, requests_oauthlib, python-dateutil, google-auth, adal, + ipaddress, websocket-client, urllib3, pyyaml, requests_oauthlib, python-dateutil, google-auth, adal, isort, pytest, coverage, mock, sphinx, autopep8, pep8, codecov, recommonmark, nose }: buildPythonPackage rec { @@ -28,7 +28,7 @@ buildPythonPackage rec { }; checkInputs = [ isort coverage pytest mock sphinx autopep8 pep8 codecov recommonmark nose ]; - propagatedBuildInputs = [ ipaddress websocket_client urllib3 pyyaml requests_oauthlib python-dateutil google-auth adal ]; + propagatedBuildInputs = [ ipaddress websocket-client urllib3 pyyaml requests_oauthlib python-dateutil google-auth adal ]; meta = with lib; { description = "Kubernetes python client"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/labelbox/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/labelbox/default.nix index 957b8ad5fd..423185b6f2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/labelbox/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/labelbox/default.nix @@ -19,14 +19,14 @@ buildPythonPackage rec { pname = "labelbox"; - version = "2.5.4"; + version = "2.6.0"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "Labelbox"; repo = "labelbox-python"; - rev = "v${version}"; - sha256 = "0182klvm8bjcm8fkl9w8ypj12s026czgid8ldl6jjvmzhxpmss68"; + rev = "V${version}"; + sha256 = "1lkvc926i3c7isqhaja6k013qgla44cdhvkx76gpdyywq53i9mcb"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ledgerblue/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ledgerblue/default.nix index a900c61d40..a70923de2b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ledgerblue/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ledgerblue/default.nix @@ -1,6 +1,6 @@ { lib, fetchPypi, buildPythonPackage, hidapi , pycrypto, pillow, protobuf, future, ecpy, python-u2flib-host, pycryptodomex -, websocket_client +, websocket-client }: buildPythonPackage rec { @@ -13,7 +13,7 @@ buildPythonPackage rec { }; propagatedBuildInputs = [ - hidapi pycrypto pillow protobuf future ecpy python-u2flib-host pycryptodomex websocket_client + hidapi pycrypto pillow protobuf future ecpy python-u2flib-host pycryptodomex websocket-client ]; # No tests diff --git a/third_party/nixpkgs/pkgs/development/python-modules/libcst/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/libcst/default.nix index ed6e7755bf..5a1ef3b7f7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/libcst/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/libcst/default.nix @@ -1,21 +1,22 @@ { lib +, black , buildPythonPackage -, fetchFromGitHub -, pythonOlder -, hypothesis , dataclasses -, hypothesmith -, pytestCheckHook +, fetchFromGitHub +, hypothesis +, isort +, pytest +, python +, pythonOlder , pyyaml , typing-extensions , typing-inspect -, black -, isort }: buildPythonPackage rec { pname = "libcst"; - version = "0.3.18"; + version = "0.3.19"; + disabled = pythonOlder "3.6"; # Some files for tests missing from PyPi # https://github.com/Instagram/LibCST/issues/331 @@ -23,28 +24,40 @@ buildPythonPackage rec { owner = "instagram"; repo = pname; rev = "v${version}"; - sha256 = "sha256-19yGaKBLpGASSPv/aSX0kx9lh2JxKExHJDKKtuBbuqI="; + sha256 = "012g1hyaj015k2sf38a7jnpzjic0f8j97ar84d0f00w2ifzwx4ma"; }; - disabled = pythonOlder "3.6"; + propagatedBuildInputs = [ + hypothesis + typing-extensions + typing-inspect + pyyaml + ] ++ lib.optional (pythonOlder "3.7") [ + dataclasses + ]; - propagatedBuildInputs = [ hypothesis typing-extensions typing-inspect pyyaml ] - ++ lib.optional (pythonOlder "3.7") dataclasses; - - checkInputs = [ black hypothesmith isort pytestCheckHook ]; - - # can't run tests due to circular dependency on hypothesmith -> licst - doCheck = false; + checkInputs = [ + black + isort + pytest + ]; preCheck = '' - python -m libcst.codegen.generate visitors - python -m libcst.codegen.generate return_types + ${python.interpreter} -m libcst.codegen.generate visitors + ${python.interpreter} -m libcst.codegen.generate return_types + # Can't run all tests due to circular dependency on hypothesmith -> libcst + rm -r {libcst/tests,libcst/codegen/tests,libcst/m*/tests} ''; + disabledTests = [ + # No files are generated + "test_codemod_formatter_error_input" + ]; + pythonImportsCheck = [ "libcst" ]; meta = with lib; { - description = "A Concrete Syntax Tree (CST) parser and serializer library for Python."; + description = "Concrete Syntax Tree (CST) parser and serializer library for Python"; homepage = "https://github.com/Instagram/libcst"; license = with licenses; [ mit asl20 psfl ]; maintainers = with maintainers; [ ruuda SuperSandro2000 ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/libpyfoscam/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/libpyfoscam/default.nix new file mode 100644 index 0000000000..3f7eaad8ce --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/libpyfoscam/default.nix @@ -0,0 +1,26 @@ +{ lib +, buildPythonPackage +, fetchPypi +}: + +buildPythonPackage rec { + pname = "libpyfoscam"; + version = "1.1"; + + src = fetchPypi { + inherit pname version; + sha256 = "c274cafd2c6493ab397fe9f0f8aae0b2c35c7c661fe76dde3bd2f1cd56b8fc32"; + }; + + # tests need access to a camera + doCheck = false; + + pythonImportsCheck = [ "libpyfoscam" ]; + + meta = with lib; { + description = "Python Library for Foscam IP Cameras"; + homepage = "https://github.com/viswa-swami/python-foscam"; + license = licenses.lgpl3Plus; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/librosa/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/librosa/default.nix index 45f6bffd66..cb8f4c023b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/librosa/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/librosa/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "librosa"; - version = "0.8.0"; + version = "0.8.1"; src = fetchPypi { inherit pname version; - sha256 = "af0b9f2ed4bbf6aecbc448a4cd27c16453c397cb6bef0f0cfba0e63afea2b839"; + sha256 = "c53d05e768ae4a3e553ae21c2e5015293e5efbfd5c12d497f1104cb519cca6b3"; }; propagatedBuildInputs = [ joblib matplotlib six scikit-learn decorator audioread resampy soundfile pooch ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/libsoundtouch/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/libsoundtouch/default.nix index 77dcdcaef0..edee7a6253 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/libsoundtouch/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/libsoundtouch/default.nix @@ -3,7 +3,7 @@ , fetchFromGitHub , enum-compat , requests -, websocket_client +, websocket-client , zeroconf , pytestCheckHook }: @@ -22,7 +22,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ requests enum-compat - websocket_client + websocket-client zeroconf ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/libtmux/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/libtmux/default.nix index e019951f6f..5d2a8dd38a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/libtmux/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/libtmux/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "libtmux"; - version = "0.8.5"; + version = "0.10.1"; src = fetchPypi { inherit pname version; - sha256 = "1d35b9f8451944d31c5ed22ed9e6c8e18034adcc75718fcc5b27fbd9621543e1"; + sha256 = "c8bc81499616ba899538704e419463a1c83ba7ca21e53b1efc6abbe98eb26b61"; }; checkInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/lightgbm/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/lightgbm/default.nix index fbe9e04b64..46306feb93 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/lightgbm/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/lightgbm/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "lightgbm"; - version = "3.2.0"; + version = "3.2.1"; src = fetchPypi { inherit pname version; - sha256 = "000c6e0e225834a8a94a84571cf41e4b7c7b97a0db6d286c1237de8ba6066726"; + sha256 = "bd98e3b501b4c24dc127f4ad93e467f42923fe3eefa99e143b5b93158f024395"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/limnoria/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/limnoria/default.nix index 6f0532a390..b8b13fab29 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/limnoria/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/limnoria/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "limnoria"; - version = "2021.03.13"; + version = "2021.06.15"; disabled = isPy27; # abandoned upstream src = fetchPypi { inherit pname version; - sha256 = "c13dd7a84eddfcf9c3068d57f3c9da90ea7c0d11688dc3f78f9265f3f093c6ea"; + sha256 = "47290281f3f945261a7f8d8c6f207dcb1d277b241f58827d5a76ab8cd453a1d0"; }; patchPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/line_profiler/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/line_profiler/default.nix index b99e60b819..aac026cea9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/line_profiler/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/line_profiler/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "line_profiler"; - version = "3.1.0"; + version = "3.3.0"; src = fetchPypi { inherit pname version; - sha256 = "e73ff429236d59d48ce7028484becfa01449b3d52abdcf7337e0ff2acdc5093c"; + sha256 = "8bd8353e9403b226def4438dbfdb57cafefb24488e49a6039cc63906c0bc8836"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/lmnotify/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/lmnotify/default.nix new file mode 100644 index 0000000000..340e8386a0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/lmnotify/default.nix @@ -0,0 +1,30 @@ +{ lib +, buildPythonPackage +, fetchPypi +, oauthlib +, requests +, requests_oauthlib +}: + +buildPythonPackage rec { + pname = "lmnotify"; + version = "0.0.4"; + + src = fetchPypi { + inherit pname version; + sha256 = "1l0h4yab7ix8psf65iygc1wy5xwq3v2rwwjixvd8rwk46d2477dx"; + }; + + propagatedBuildInputs = [ oauthlib requests requests_oauthlib ]; + + doCheck = false; # no tests exist + + pythonImportsCheck = [ "lmnotify" ]; + + meta = with lib; { + description = "Python package for sending notifications to LaMetric Time"; + homepage = "https://github.com/keans/lmnotify"; + maintainers = with maintainers; [ rhoriguchi ]; + license = licenses.mit; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/lsassy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/lsassy/default.nix index ad9d09b326..19d9141a0d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/lsassy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/lsassy/default.nix @@ -8,13 +8,13 @@ buildPythonPackage rec { pname = "lsassy"; - version = "2.1.3"; + version = "2.1.5"; src = fetchFromGitHub { owner = "Hackndo"; repo = pname; rev = "v${version}"; - sha256 = "1zig34ymc1h18gjc2ji0w0711im5sm9xm6nydc01c13yfpvvj1rh"; + sha256 = "15w12asy797dxsz57avbxy6dbi7va9p5jx6i3gm9df9mbj0j3lcc"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/maestral/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/maestral/default.nix index 63425b6c85..86794cba4d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/maestral/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/maestral/default.nix @@ -9,14 +9,14 @@ buildPythonPackage rec { pname = "maestral"; - version = "1.4.3"; + version = "1.4.4"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "SamSchott"; repo = "maestral"; rev = "v${version}"; - sha256 = "sha256-3GleQNkJrGIkFqOL2Dq0jTpgw7ts9ecpovKbyh3OrEI="; + sha256 = "03scg4y13jbi8n454hc4vq8p02isbhppqx0zhbady639p7l3ggfg"; }; propagatedBuildInputs = [ @@ -52,6 +52,6 @@ buildPythonPackage rec { license = licenses.mit; maintainers = with maintainers; [ peterhoeg ]; platforms = platforms.unix; - inherit (src.meta) homepage; + homepage = "https://maestral.app"; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mahotas/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mahotas/default.nix index 818ff45998..707ad9f3c8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mahotas/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mahotas/default.nix @@ -1,26 +1,36 @@ -{ buildPythonPackage, fetchFromGitHub, nose, pillow, scipy, numpy, imread, lib, stdenv }: +{ buildPythonPackage, fetchFromGitHub, pillow, scipy, numpy, pytestCheckHook, imread, freeimage, lib, stdenv }: buildPythonPackage rec { pname = "mahotas"; - version = "1.4.10"; + version = "1.4.11"; src = fetchFromGitHub { owner = "luispedro"; repo = "mahotas"; rev = "v${version}"; - sha256 = "0fjiyl82wj1a6xzr9mss2y2rydl4zchl2cbdbg0jm0fcrs99q4hw"; + sha256 = "029gvy1fb855pvxvy8zwj44k4s7qpqi0161bg5wldfiprrysn1kw"; }; - # remove this as soon as https://github.com/luispedro/mahotas/issues/97 is fixed - patches = [ ./disable-impure-tests.patch ]; + propagatedBuildInputs = [ numpy imread pillow scipy freeimage ]; + checkInputs = [ pytestCheckHook ]; - propagatedBuildInputs = [ numpy imread pillow scipy ]; - checkInputs = [ nose ]; - - checkPhase= '' - python setup.py test + postPatch = '' + substituteInPlace mahotas/io/freeimage.py --replace "/opt/local/lib" "${freeimage}/lib" ''; + # tests must be run in the build directory + preCheck = '' + cd build/lib* + ''; + + # re-enable as soon as https://github.com/luispedro/mahotas/issues/97 is fixed + disabledTests = [ + "test_colors" + "test_ellipse_axes" + "test_normalize" + "test_haralick3d" + ]; + disabled = stdenv.isi686; # Failing tests meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mahotas/disable-impure-tests.patch b/third_party/nixpkgs/pkgs/development/python-modules/mahotas/disable-impure-tests.patch deleted file mode 100644 index f19bd329e6..0000000000 --- a/third_party/nixpkgs/pkgs/development/python-modules/mahotas/disable-impure-tests.patch +++ /dev/null @@ -1,76 +0,0 @@ -diff --git a/mahotas/tests/test_colors.py b/mahotas/tests/test_colors.py -index 8a8183b..0d34c9f 100644 ---- a/mahotas/tests/test_colors.py -+++ b/mahotas/tests/test_colors.py -@@ -2,7 +2,9 @@ import mahotas - import numpy as np - from mahotas.tests.utils import luispedro_jpg - from mahotas.colors import rgb2xyz, rgb2lab, xyz2rgb, rgb2grey, rgb2sepia -+from nose.tools import nottest - -+@nottest - def test_colors(): - f = luispedro_jpg() - lab = rgb2lab(f) -diff --git a/mahotas/tests/test_features_shape.py b/mahotas/tests/test_features_shape.py -index 462f467..2381793 100644 ---- a/mahotas/tests/test_features_shape.py -+++ b/mahotas/tests/test_features_shape.py -@@ -2,6 +2,7 @@ import mahotas.features.shape - import numpy as np - import mahotas as mh - from mahotas.features.shape import roundness, eccentricity -+from nose.tools import nottest - - def test_eccentricity(): - D = mh.disk(32, 2) -@@ -29,6 +30,7 @@ def test_zeros(): - I[8:4:12] = 1 - assert eccentricity(I) == 0 - -+@nottest - def test_ellipse_axes(): - Y,X = np.mgrid[:1024,:1024] - Y = Y/1024. -diff --git a/mahotas/tests/test_moments.py b/mahotas/tests/test_moments.py -index 686c7c3..ba3487b 100644 ---- a/mahotas/tests/test_moments.py -+++ b/mahotas/tests/test_moments.py -@@ -1,6 +1,7 @@ - import numpy as np - import mahotas as mh - from mahotas.features.moments import moments -+from nose.tools import nottest - - def _slow(A, p0, p1, cm): - c0,c1 = cm -@@ -28,7 +29,7 @@ def test_against_slow(): - yield perform, 1, 2, (0, 0), A - yield perform, 1, 0, (0, 0), A - -- -+@nottest - def test_normalize(): - A,B = np.meshgrid(np.arange(128),np.arange(128)) - for p0,p1 in [(1,1), (1,2), (2,1), (2,2)]: -diff --git a/mahotas/tests/test_texture.py b/mahotas/tests/test_texture.py -index 7e101ba..af1305d 100644 ---- a/mahotas/tests/test_texture.py -+++ b/mahotas/tests/test_texture.py -@@ -2,7 +2,7 @@ import numpy as np - from mahotas.features import texture - import mahotas as mh - import mahotas.features._texture --from nose.tools import raises -+from nose.tools import raises, nottest - - def test__cooccurence(): - cooccurence = mahotas.features._texture.cooccurence -@@ -149,6 +149,7 @@ def test_float_haralick(): - A[2,2]=12 - texture.haralick(A) - -+@nottest - def test_haralick3d(): - np.random.seed(22) - img = mahotas.stretch(255*np.random.rand(20,20,4)) diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mailchimp/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mailchimp/default.nix index 91563b7fe7..787ecb0316 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mailchimp/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mailchimp/default.nix @@ -6,12 +6,12 @@ }: buildPythonPackage rec { - version = "2.0.9"; + version = "2.0.10"; pname = "mailchimp"; src = fetchPypi { inherit pname version; - sha256 = "0351ai0jqv3dzx0xxm1138sa7mb42si6xfygl5ak8wnfc95ff770"; + sha256 = "5227999904233a7d2e9ce5eac5225b9a5fac0318ae5107e3ed09c8bf89286768"; }; buildInputs = [ docopt ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/makefun/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/makefun/default.nix index 731226fdbf..12655c0d6d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/makefun/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/makefun/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "makefun"; - version = "1.11.2"; + version = "1.11.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-2qNQpILtWLVyREPGUUMhkem5ewyDdDh50JExccaigIU="; + sha256 = "033eed65e2c1804fca84161a38d1fc8bb8650d32a89ac1c5dc7e54b2b2c2e88c"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/manhole/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/manhole/default.nix index 2019d7e318..34be99bc8d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/manhole/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/manhole/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "manhole"; - version = "1.7.0"; + version = "1.8.0"; src = fetchPypi { inherit pname version; - sha256 = "224985bf1dd032f2dc0ca4107f727835b6f50e1df6d78781d6c9f4cae8b585e2"; + sha256 = "bada20a25b547b395d472e2e08928f0437df26bbdbda4797c55863198e29a21f"; }; # test_help expects architecture-dependent Linux signal numbers. diff --git a/third_party/nixpkgs/pkgs/development/python-modules/marisa-trie/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/marisa-trie/default.nix index e646ee71ec..69f272c409 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/marisa-trie/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/marisa-trie/default.nix @@ -3,7 +3,7 @@ , fetchPypi , cython , pytestrunner -, pytest +, pytestCheckHook , hypothesis }: @@ -21,13 +21,26 @@ buildPythonPackage rec { --replace "hypothesis==" "hypothesis>=" ''; - nativeBuildInputs = [ cython pytestrunner ]; + nativeBuildInputs = [ + cython + pytestrunner + ]; preBuild = '' ./update_cpp.sh ''; - checkInputs = [ pytest hypothesis ]; + checkInputs = [ + pytestCheckHook + hypothesis + ]; + + disabledTests = [ + # Pins hypothesis==2.0.0 from 2016/01 which complains about + # hypothesis.errors.FailedHealthCheck: tests/test_trie.py::[...] uses the 'tmpdir' fixture, which is reset between function calls but not between test cases generated by `@given(...)`. + "test_saveload" + "test_mmap" + ]; meta = with lib; { description = "Static memory-efficient Trie-like structures for Python (2.x and 3.x) based on marisa-trie C++ library"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/markdown-it-py/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/markdown-it-py/default.nix index 322c4ac533..dc8866350b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/markdown-it-py/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/markdown-it-py/default.nix @@ -1,4 +1,9 @@ -{ lib, buildPythonPackage, fetchFromGitHub, pytestCheckHook, pythonOlder +{ lib +, buildPythonPackage +, fetchFromGitHub +, fetchpatch +, pytestCheckHook +, pythonOlder , attrs , linkify-it-py , psutil @@ -21,6 +26,15 @@ buildPythonPackage rec { hash = "sha256-GA7P2I8N+i2ISsVgx58zyhrfKMcZ7pL4X9T/trbsr1Y="; }; + patches = [ + (fetchpatch { + # :arrow_up: UPGRADE: attrs -> v21 (#165) + # https://github.com/executablebooks/markdown-it-py/pull/165 + url = "https://github.com/executablebooks/markdown-it-py/commit/78381ffe1a651741594dc93e693b761422512fa2.patch"; + sha256 = "1kxhblpi4sycrs3rv50achr8g0wlgq33abg2acra26l736hlsya1"; + }) + ]; + propagatedBuildInputs = [ attrs linkify-it-py ] ++ lib.optional (pythonOlder "3.8") typing-extensions; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/markdown/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/markdown/default.nix index c0175a2e88..c1eff88b92 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/markdown/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/markdown/default.nix @@ -1,36 +1,37 @@ { lib , buildPythonPackage -, fetchPypi -, setuptools -, nose -, pyyaml , pythonOlder +, fetchPypi , importlib-metadata -, isPy3k +, pyyaml +, python }: buildPythonPackage rec { pname = "Markdown"; version = "3.3.4"; + disabled = pythonOlder "3.6"; + src = fetchPypi { inherit pname version; sha256 = "31b5b491868dcc87d6c24b7e3d19a0d730d59d3e46f4eea6430a321bed387a49"; }; - propagatedBuildInputs = [ - setuptools - ] ++ lib.optionals (pythonOlder "3.8") [ + propagatedBuildInputs = lib.optionals (pythonOlder "3.8") [ importlib-metadata ]; - disabled = !isPy3k; + checkInputs = [ pyyaml ]; - checkInputs = [ nose pyyaml ]; + checkPhase = '' + ${python.interpreter} -m unittest discover + ''; - meta = { + meta = with lib; { description = "A Python implementation of John Gruber's Markdown with Extension support"; homepage = "https://github.com/Python-Markdown/markdown"; - license = lib.licenses.bsd3; + license = licenses.bsd3; + maintainers = with maintainers; [ dotlambda ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/markupsafe/1.nix b/third_party/nixpkgs/pkgs/development/python-modules/markupsafe/1.nix new file mode 100644 index 0000000000..ae0878c7a9 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/markupsafe/1.nix @@ -0,0 +1,22 @@ +{ lib +, buildPythonPackage +, fetchPypi +}: + +buildPythonPackage rec { + pname = "MarkupSafe"; + version = "1.1.1"; + + src = fetchPypi { + inherit pname version; + sha256 = "29872e92839765e546828bb7754a68c418d927cd064fd4708fab9fe9c8bb116b"; + }; + + meta = with lib; { + description = "Implements a XML/HTML/XHTML Markup safe string"; + homepage = "http://dev.pocoo.org"; + license = licenses.bsd3; + maintainers = with maintainers; [ domenkozar ]; + }; + +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/markupsafe/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/markupsafe/default.nix index ae0878c7a9..d48359af0f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/markupsafe/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/markupsafe/default.nix @@ -1,17 +1,24 @@ { lib , buildPythonPackage +, pythonOlder , fetchPypi +, pytestCheckHook }: buildPythonPackage rec { pname = "MarkupSafe"; - version = "1.1.1"; + version = "2.0.1"; + disabled = pythonOlder "3.6"; - src = fetchPypi { + src = fetchPypi { inherit pname version; - sha256 = "29872e92839765e546828bb7754a68c418d927cd064fd4708fab9fe9c8bb116b"; + sha256 = "02k2ynmqvvd0z0gakkf8s4idyb606r7zgga41jrkhqmigy06fk2r"; }; + checkInputs = [ + pytestCheckHook + ]; + meta = with lib; { description = "Implements a XML/HTML/XHTML Markup safe string"; homepage = "http://dev.pocoo.org"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/marshmallow-sqlalchemy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/marshmallow-sqlalchemy/default.nix index ba10c89e14..1aeaa04e17 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/marshmallow-sqlalchemy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/marshmallow-sqlalchemy/default.nix @@ -1,5 +1,6 @@ { lib , buildPythonPackage +, pythonOlder , fetchPypi , marshmallow , sqlalchemy @@ -9,11 +10,12 @@ buildPythonPackage rec { pname = "marshmallow-sqlalchemy"; - version = "0.24.2"; + version = "0.26.1"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "ee3ead3b83de6608c6850ff60515691b0dc556ca226680f8a82b9f785cdb71b1"; + sha256 = "d8525f74de51554b5c8491effe036f60629a426229befa33ff614c8569a16a73"; }; propagatedBuildInputs = [ @@ -21,6 +23,10 @@ buildPythonPackage rec { sqlalchemy ]; + pythonImportsCheck = [ + "marshmallow_sqlalchemy" + ]; + checkInputs = [ pytest-lazy-fixture pytestCheckHook @@ -28,7 +34,7 @@ buildPythonPackage rec { meta = with lib; { homepage = "https://github.com/marshmallow-code/marshmallow-sqlalchemy"; - description = "SQLAlchemy integration with marshmallow "; + description = "SQLAlchemy integration with marshmallow"; license = licenses.mit; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/marshmallow/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/marshmallow/default.nix index a7ca14beb9..3de64fea37 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/marshmallow/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/marshmallow/default.nix @@ -1,27 +1,42 @@ -{ lib, buildPythonPackage, fetchPypi, - dateutil, simplejson, isPy27 +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, pytestCheckHook +, pytz +, simplejson }: buildPythonPackage rec { pname = "marshmallow"; - version = "3.10.0"; - disabled = isPy27; + version = "3.11.1"; + disabled = pythonOlder "3.5"; - meta = { - homepage = "https://github.com/marshmallow-code/marshmallow"; + src = fetchFromGitHub { + owner = "marshmallow-code"; + repo = pname; + rev = version; + sha256 = "1ypm142y3giaqydc7fkigm9r057yp2sd1ng5zr2x3w3wbbj5yfm6"; + }; + + pythonImportsCheck = [ + "marshmallow" + ]; + + checkInputs = [ + pytestCheckHook + pytz + simplejson + ]; + + meta = with lib; { description = '' A lightweight library for converting complex objects to and from simple Python datatypes. ''; - license = lib.licenses.mit; + homepage = "https://github.com/marshmallow-code/marshmallow"; + license = licenses.mit; + maintainers = with maintainers; [ cript0nauta ]; }; - src = fetchPypi { - inherit pname version; - sha256 = "4ab2fdb7f36eb61c3665da67a7ce281c8900db08d72ba6bf0e695828253581f7"; - }; - - propagatedBuildInputs = [ dateutil simplejson ]; - - doCheck = false; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mastodon-py/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mastodon-py/default.nix new file mode 100644 index 0000000000..c1a7c8985b --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/mastodon-py/default.nix @@ -0,0 +1,61 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, blurhash +, cryptography +, decorator +, http-ece +, python-dateutil +, python_magic +, pytz +, requests +, six +, pytestCheckHook +, pytest-mock +, pytest-vcr +, requests-mock +}: + +buildPythonPackage rec { + pname = "mastodon-py"; + version = "1.5.1"; + + src = fetchFromGitHub { + owner = "halcy"; + repo = "Mastodon.py"; + rev = version; + sha256 = "044iqydw69a6xpz2hdjv1fc6a9b7bqdpnh3b33xqbks9d2415ddm"; + }; + + postPatch = '' + sed -i '/^addopts/d' setup.cfg + ''; + + propagatedBuildInputs = [ + blurhash + cryptography + decorator + http-ece + python-dateutil + python_magic + pytz + requests + six + ]; + + checkInputs = [ + pytestCheckHook + pytest-mock + pytest-vcr + requests-mock + ]; + + pythonImportsCheck = [ "mastodon" ]; + + meta = with lib; { + description = "Python wrapper for the Mastodon API"; + homepage = "https://github.com/halcy/Mastodon.py"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/matplotlib-inline/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/matplotlib-inline/default.nix new file mode 100644 index 0000000000..f4c220dea6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/matplotlib-inline/default.nix @@ -0,0 +1,35 @@ +{ lib, buildPythonPackage, fetchPypi +, matplotlib +, traitlets + +# tests +, ipython +}: + +buildPythonPackage rec { + pname = "matplotlib-inline"; + version = "0.1.2"; + + src = fetchPypi { + inherit pname version; + sha256 = "0glrhcv1zqck1whsh3p75x0chda588xw22swbmvqalwz7kvmy7gl"; + }; + + propagatedBuildInputs = [ + matplotlib # not documented, but required + traitlets + ]; + + # wants to import ipython, which creates a circular dependency + doCheck = false; + pythonImportsCheck = [ "matplotlib_inline" ]; + + passthru.tests = { inherit ipython; }; + + meta = with lib; { + description = "Matplotlib Inline Back-end for IPython and Jupyter"; + homepage = "https://github.com/ipython/matplotlib-inline"; + license = licenses.bsd3; + maintainers = with maintainers; [ jonringer ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/matplotlib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/matplotlib/default.nix index 12ef896117..75f75e981c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/matplotlib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/matplotlib/default.nix @@ -17,14 +17,14 @@ let in buildPythonPackage rec { - version = "3.4.1"; + version = "3.4.2"; pname = "matplotlib"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "84d4c4f650f356678a5d658a43ca21a41fca13f9b8b00169c0b76e6a6a948908"; + sha256 = "d8d994cefdff9aaba45166eb3de4f5211adb4accac85cbf97137e98f26ea0219"; }; XDG_RUNTIME_DIR = "/tmp"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/matrix-nio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/matrix-nio/default.nix index 3e613fd89a..4fad524bfa 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/matrix-nio/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/matrix-nio/default.nix @@ -38,6 +38,11 @@ buildPythonPackage rec { sha256 = "QHNirglqSxGMmbST96LUp9MHoGj0yAwLoTRlsbMqwaM="; }; + postPatch = '' + substituteInPlace pyproject.toml \ + --replace 'aiofiles = "^0.6.0"' 'aiofiles = "*"' + ''; + nativeBuildInputs = [ git poetry-core diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mautrix/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mautrix/default.nix index 6a6e353673..f61ace8960 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mautrix/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mautrix/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "mautrix"; - version = "0.8.17"; + version = "0.9.6"; src = fetchPypi { inherit pname version; - sha256 = "9a15a8e39f9d0b36c91dfe0f5dd1efc8752cc1d317057840a3dbffd6ee90e068"; + sha256 = "1810deb7f780700e7e0734e1844c1b4b2525ee990b8665f7b98e3f335a31bbcf"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mcstatus/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mcstatus/default.nix index cf61eb2fa3..43906cd95a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mcstatus/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mcstatus/default.nix @@ -13,14 +13,14 @@ buildPythonPackage rec { pname = "mcstatus"; - version = "5.2.0"; + version = "6.1.0"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "Dinnerbone"; repo = pname; rev = "v${version}"; - sha256 = "sha256-RlqzeixaHgyIl/7mMRkZAEsqJEP79Bz1bDGAU8PIetU="; + sha256 = "068dc2ilw1kkvw394vqhqgkia5smnvzaca5zbdd2xyl3nch3rk4x"; }; propagatedBuildInputs = [ @@ -36,10 +36,6 @@ buildPythonPackage rec { pytestCheckHook ]; - postPatch = '' - substituteInPlace requirements.txt --replace "dnspython3" "dnspython" - ''; - pythonImportsCheck = [ "mcstatus" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/meshtastic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/meshtastic/default.nix index c8a9d78e7c..6826298699 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/meshtastic/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/meshtastic/default.nix @@ -15,12 +15,12 @@ buildPythonPackage rec { pname = "meshtastic"; - version = "1.2.30"; + version = "1.2.40"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "1kjflc2jwnsgxyr2zx1gyykhak9fsgy6hxaxlggsz5sw9b8rdrby"; + sha256 = "be8464037d0c8085350065b38e7a7b028db15f2524764dec0e3548ea5b53500f"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/metakernel/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/metakernel/default.nix new file mode 100644 index 0000000000..eec3da25e0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/metakernel/default.nix @@ -0,0 +1,30 @@ +{ lib +, buildPythonPackage +, fetchPypi +, ipykernel +, isPy27 +, mock +, pytest +}: + +buildPythonPackage rec { + pname = "metakernel"; + version = "0.27.5"; + + src = fetchPypi { + inherit pname version; + sha256 = "0aqq9zil6h7kxsg3v2008nr6lv47qvcsash8qzmi1xh6r4x606zy"; + }; + + propagatedBuildInputs = [ ipykernel ]; + + # Tests hang, so disable + doCheck = false; + + meta = with lib; { + description = "Jupyter/IPython Kernel Tools"; + homepage = "https://github.com/Calysto/metakernel"; + license = licenses.bsd3; + maintainers = with maintainers; [ thomasjm ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/meteoalertapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/meteoalertapi/default.nix new file mode 100644 index 0000000000..555059f568 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/meteoalertapi/default.nix @@ -0,0 +1,37 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +, requests +, xmltodict +}: + +buildPythonPackage rec { + pname = "meteoalertapi"; + version = "0.2.0"; + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "rolfberkenbosch"; + repo = "meteoalert-api"; + rev = "v${version}"; + sha256 = "sha256-EdHqWEkE/uUtz/xjV4k4NvNvtPPU4sJjHGwUM7J+HWs="; + }; + + propagatedBuildInputs = [ + requests + xmltodict + ]; + + # Tests require network access + doCheck = false; + + pythonImportsCheck = [ "meteoalertapi" ]; + + meta = with lib; { + description = "Python wrapper for MeteoAlarm.org"; + homepage = "https://github.com/rolfberkenbosch/meteoalert-api"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mido/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mido/default.nix index ae737dc716..909c224685 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mido/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mido/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "mido"; - version = "1.2.9"; + version = "1.2.10"; src = fetchPypi { inherit pname version; - sha256 = "1k3sgkxc7j49bapib3b5jnircb1yhyyd8mi0mbfd78zgix9db9y4"; + sha256 = "17b38a8e4594497b850ec6e78b848eac3661706bfc49d484a36d91335a373499"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/milc/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/milc/default.nix index afdab1194b..ebf4d1d2d2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/milc/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/milc/default.nix @@ -4,29 +4,33 @@ , appdirs , argcomplete , colorama +, halo , nose2 , semver }: buildPythonPackage rec { pname = "milc"; - version = "1.3.0"; + version = "1.4.2"; src = fetchFromGitHub { owner = "clueboard"; repo = "milc"; rev = version; - sha256 = "sha256-koyOBz+pB/vkTHOR1p77ACO11/ULDIBzqsszUUpnE88="; + sha256 = "sha256-aX6cTpIN9+9xuEGYHVlM5SjTPLcudJFEuOI4CiN3byE="; }; - propagatedBuildInputs = [ appdirs argcomplete colorama ]; + propagatedBuildInputs = [ + appdirs + argcomplete + colorama + halo + ]; - checkInputs = [ nose2 semver ]; - - checkPhase = '' - patchShebangs example hello + checkInputs = [ nose2 - ''; + semver + ]; pythonImportsCheck = [ "milc" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/millheater/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/millheater/default.nix new file mode 100644 index 0000000000..d6815f53d7 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/millheater/default.nix @@ -0,0 +1,37 @@ +{ lib +, aiohttp +, async-timeout +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +}: + +buildPythonPackage rec { + pname = "millheater"; + version = "0.4.2"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "Danielhiversen"; + repo = "pymill"; + rev = version; + sha256 = "sha256-B9/nxlPHAPZzbOMQj81CxTEjI03JQxfH8F8vy1E4HIQ="; + }; + + propagatedBuildInputs = [ + aiohttp + async-timeout + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "mill" ]; + + meta = with lib; { + description = "Python library for Mill heater devices"; + homepage = "https://github.com/Danielhiversen/pymill"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/miniaudio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/miniaudio/default.nix new file mode 100644 index 0000000000..61b7c68d53 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/miniaudio/default.nix @@ -0,0 +1,38 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, cffi +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "miniaudio"; + version = "1.44"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "irmen"; + repo = "pyminiaudio"; + rev = "v${version}"; + sha256 = "1na3vx10lc41gkk14h6s3fm4bnrd2bwf4qbf1l6bfvhs92b9k111"; + }; + + propagatedBuildInputs = [ + cffi + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "miniaudio" ]; + + meta = with lib; { + description = "Python bindings for the miniaudio library and its decoders"; + homepage = "https://github.com/irmen/pyminiaudio"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/minidump/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/minidump/default.nix index 864e58839f..6c00ad650b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/minidump/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/minidump/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "minidump"; - version = "0.0.17"; + version = "0.0.18"; src = fetchPypi { inherit pname version; - sha256 = "sha256-nlPW83Tr3aec1tSYHgcZTwd+ydN12S6WNwK7gdwdatY="; + sha256 = "sha256-uf4KZc9C1gWRgHu4ttk1fpL2pG8oUb79uvCIlHItB/8="; }; # Upstream doesn't have tests diff --git a/third_party/nixpkgs/pkgs/development/python-modules/minio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/minio/default.nix index b23d264f72..eb543a6313 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/minio/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/minio/default.nix @@ -1,38 +1,53 @@ -{ lib, buildPythonPackage, isPy3k, fetchPypi +{ lib +, buildPythonPackage +, certifi , configparser , faker +, fetchFromGitHub , future , mock , nose -, python-dateutil -, pytz , pytestCheckHook +, python-dateutil +, pythonOlder +, pytz , urllib3 -, certifi }: buildPythonPackage rec { pname = "minio"; - version = "7.0.2"; - disabled = !isPy3k; + version = "7.0.4"; + disabled = pythonOlder "3.6"; - src = fetchPypi { - inherit pname version; - sha256 = "f2f6022cfe4694d946972efef2a752f87d08cc030940faa50a640088772953c8"; + src = fetchFromGitHub { + owner = "minio"; + repo = "minio-py"; + rev = version; + sha256 = "sha256-4O6WhBoMNpqv1OEewkbA5a8hYH56liF7GrfxkooQ6Fo="; }; propagatedBuildInputs = [ + certifi configparser future python-dateutil pytz urllib3 - certifi ]; - checkInputs = [ faker mock nose pytestCheckHook ]; + checkInputs = [ + faker + mock + nose + pytestCheckHook + ]; + # example credentials aren't present - pytestFlagsArray = [ "--ignore=tests/unit/credentials_test.py" ]; + disabledTestPaths = [ + "tests/unit/credentials_test.py" + ]; + + pythonImportsCheck = [ "minio" ]; meta = with lib; { description = "Simple APIs to access any Amazon S3 compatible object storage server"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mkl-service/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mkl-service/default.nix index c853129962..c54da3055e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mkl-service/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mkl-service/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "mkl-service"; - version = "2.3.0"; + version = "2.4.0"; src = fetchFromGitHub { owner = "IntelPython"; repo = "mkl-service"; rev = "v${version}"; - sha256 = "1b4dkkl439rfaa86ywzc2zf9ifawhvdlaiqcg0il83cn5bzs7g5z"; + sha256 = "1x8j0ij582dyhay0gaqq45a2jz1m4fr8xw0v65ngviajj3cxmcpb"; }; MKLROOT = mkl; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mlflow/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mlflow/default.nix index 13cfc0b63d..2940c111e5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mlflow/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mlflow/default.nix @@ -25,12 +25,12 @@ buildPythonPackage rec { pname = "mlflow"; - version = "1.14.1"; + version = "1.18.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "e3abff0831564d9a4b5d5a15e5ee76b0f5b4580b362c24a58ee821634c8fb1a3"; + sha256 = "8942089589d08c05c8a7fc66828c02a9233be462c421881b50bc2a0b183dfdbe"; }; # run into https://stackoverflow.com/questions/51203641/attributeerror-module-alembic-context-has-no-attribute-config diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mne-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mne-python/default.nix index d8add2608b..77e6f9c246 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mne-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mne-python/default.nix @@ -16,7 +16,7 @@ buildPythonPackage rec { pname = "mne-python"; - version = "0.22.0"; + version = "0.23.0"; disabled = isPy27; @@ -25,7 +25,7 @@ buildPythonPackage rec { owner = "mne-tools"; repo = pname; rev = "v${version}"; - sha256 = "1s9pshrl40gkcsdwf4qdga3hjfmdbrvbgjcz0cfx3kl796x3im11"; + sha256 = "02fcnfsrc6sccv6x2rnx86g0zw0ivk5s8gx230g6pxfg3lap6knv"; }; propagatedBuildInputs = [ numpy scipy ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mocket/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mocket/default.nix index b05260930f..73a3b07a64 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mocket/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mocket/default.nix @@ -19,12 +19,12 @@ buildPythonPackage rec { pname = "mocket"; - version = "3.9.41"; + version = "3.9.42"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "19zxqh0xk08gj0jf6im9vh53z22yf17ywzykk0fjs9g7m29x8i5j"; + sha256 = "1vvlbnbypd4z1pjlvhwhd89fn0mis5acfx4v25f1mfl04k63ffah"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mongoengine/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mongoengine/default.nix index 06f2c21041..d609f465e2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mongoengine/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mongoengine/default.nix @@ -12,14 +12,14 @@ buildPythonPackage rec { pname = "mongoengine"; - version = "0.23.0"; + version = "0.23.1"; disabled = isPy27; src = fetchFromGitHub { owner = "MongoEngine"; repo = pname; rev = "v${version}"; - sha256 = "0mzh5pv0n81ms046yxb9rzql8bpbsf26jv6dihmhi0ds4yqkw836"; + sha256 = "1lj33pgdrp4rvjzcg2glvz1f87np1pfnqhlwbdcijav9rxqc0w70"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/monty/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/monty/default.nix index 4690f9f882..ff236d9bec 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/monty/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/monty/default.nix @@ -13,7 +13,7 @@ buildPythonPackage rec { pname = "monty"; - version = "2021.3.3"; + version = "2021.6.10"; disabled = pythonOlder "3.5"; # uses type annotations # No tests in Pypi @@ -21,7 +21,7 @@ buildPythonPackage rec { owner = "materialsvirtuallab"; repo = pname; rev = "v${version}"; - sha256 = "1nbv0ys0fv70rgzskkk8gsfr9dsmm7ykim5wv36li840zsj83b1l"; + sha256 = "01fhl4pl5gj4ahph4lxcm0fmglh0bjw6jz9ckmgzviasg4l1j6h4"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/more-itertools/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/more-itertools/default.nix index 2f26cc0c86..d523a0bdb1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/more-itertools/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/more-itertools/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "more-itertools"; - version = "8.7.0"; + version = "8.8.0"; src = fetchPypi { inherit pname version; - sha256 = "c5d6da9ca3ff65220c3bfd2a8db06d698f05d4d2b9be57e1deb2be5a45019713"; + sha256 = "83f0308e05477c68f56ea3a888172c78ed5d5b3c282addb67508e7ba6c8f813a"; }; checkInputs = [ nose ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/moto/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/moto/default.nix index 7f9b7010c5..4d9156349e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/moto/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/moto/default.nix @@ -39,6 +39,7 @@ buildPythonPackage rec { substituteInPlace setup.py \ --replace "ecdsa<0.15" "ecdsa" \ --replace "idna<3,>=2.5" "idna" \ + --replace "MarkupSafe<2.0" "MarkupSafe" \ ''; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ms-cv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ms-cv/default.nix new file mode 100644 index 0000000000..aa8e361338 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/ms-cv/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, isPy27 +, fetchFromGitHub +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "ms-cv"; + version = "0.1.1"; + + disabled = isPy27; + + src = fetchFromGitHub { + owner = "OpenXbox"; + repo = "ms_cv"; + rev = "v${version}"; + sha256 = "0pkna0kvmq1cp4rx3dnzxsvvlxxngryp77k42wkyw2phv19a2mjd"; + }; + + postPatch = '' + substituteInPlace setup.py \ + --replace "pytest-runner" "" + ''; + + checkInputs = [ + pytestCheckHook + ]; + + meta = with lib; { + description = "Correlation vector implementation in python"; + homepage = "https://github.com/OpenXbox/ms_cv"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/msal/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/msal/default.nix index 735d74b523..b5095cc591 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/msal/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/msal/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "msal"; - version = "1.11.0"; + version = "1.12.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-RnrwK7lKh6G2lbUb+GdmfoKKzA3Twd5fpUP2kALbSfo="; + sha256 = "5cc93f09523c703d4e00a901cf719ade4faf2c3d14961ba52060ae78d5b25327"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mwparserfromhell/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mwparserfromhell/default.nix index 56aa466151..8c29971afe 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mwparserfromhell/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mwparserfromhell/default.nix @@ -1,17 +1,24 @@ { lib , buildPythonPackage , fetchPypi +, pytestCheckHook +, pytestrunner }: buildPythonPackage rec { pname = "mwparserfromhell"; - version = "0.6"; + version = "0.6.2"; src = fetchPypi { inherit pname version; - sha256 = "75787b6ab140ab267b313d37d045f3276f5dc6a9741074eddfbabc1635cb2efc"; + sha256 = "d3f74c0101f81ff73c61985b67f2e7048a30dc5f6a578ea1544e69133988d874"; }; + checkInputs = [ + pytestCheckHook + pytestrunner + ]; + meta = with lib; { description = "MWParserFromHell is a parser for MediaWiki wikicode"; homepage = "https://mwparserfromhell.readthedocs.io/en/latest/"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mypy-boto3-builder/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mypy-boto3-builder/default.nix index 860646af9c..0c871c90a3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mypy-boto3-builder/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mypy-boto3-builder/default.nix @@ -14,14 +14,14 @@ buildPythonPackage rec { pname = "mypy-boto3-builder"; - version = "4.12.0"; + version = "4.14.1"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "vemel"; repo = "mypy_boto3_builder"; rev = version; - sha256 = "09kbmrpnph5kbxlqqavpxg3l85dmk3vzmwawa4s09y9gknxxkcv9"; + sha256 = "sha256-y55bPi70ldd528Olr2atXHm5JHiLNBZ396D9qwbBmkc="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/mypy-boto3-s3/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/mypy-boto3-s3/default.nix index af97c5e103..b25e838c96 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/mypy-boto3-s3/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/mypy-boto3-s3/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "mypy-boto3-s3"; - version = "1.17.71"; + version = "1.17.97"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "0zgx3f41j80xy203jwms7j72svxy10ry5v9w3ql817ai4lcrspnn"; + sha256 = "cc12897498213e6aa1530d9f75dadb3916fcd3ce376639560c2fede2c93c51b9"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nbclassic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nbclassic/default.nix index a6aa34a88e..0e6630281c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nbclassic/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nbclassic/default.nix @@ -10,15 +10,15 @@ buildPythonPackage rec { pname = "nbclassic"; - version = "0.2.6"; - disabled = pythonOlder "3.5"; + version = "0.3.1"; + disabled = pythonOlder "3.6"; # tests only on github src = fetchFromGitHub { owner = "jupyterlab"; repo = pname; rev = version; - sha256 = "sha256-stp0LZJAOCrnObvJIPEVt8mMb8yL29nlHECypbTg3ec="; + sha256 = "sha256-gx086w/qYB02UFEDly+0mUsV5BvAVAuhqih4wev2p/w="; }; propagatedBuildInputs = [ jupyter_server notebook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nbformat/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nbformat/default.nix index a3143780e1..a8e6993d64 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nbformat/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nbformat/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "nbformat"; - version = "5.1.2"; + version = "5.1.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-HSI+ZKGL+nzfLbLpuoqBgxL8KgcB0ukQtY32aAk4WlY="; + sha256 = "b516788ad70771c6250977c1374fcca6edebe6126fd2adb5a69aa5c2356fd1c8"; }; LC_ALL="en_US.utf8"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nbsphinx/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nbsphinx/default.nix index c02baa571e..8611059eb3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nbsphinx/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nbsphinx/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "nbsphinx"; - version = "0.8.2"; + version = "0.8.6"; src = fetchPypi { inherit pname version; - sha256 = "53352237e2363079f6e38637a8ce90b47e720c8e2eb133a6a6f66fc13ff494cb"; + sha256 = "097dee333558f400e9abbb53ce7d4fa64a257cfa89dd20f7554dca7f0cd5e143"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ncclient/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ncclient/default.nix index 2e352be412..010e2a5bae 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ncclient/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ncclient/default.nix @@ -1,34 +1,34 @@ { lib , buildPythonPackage -, fetchPypi +, fetchFromGitHub , paramiko , selectors2 , lxml -, nose -, rednose +, pytestCheckHook }: buildPythonPackage rec { pname = "ncclient"; - version = "0.6.10"; + version = "0.6.12"; - src = fetchPypi { - inherit pname version; - sha256 = "67b1eba5a6c7c6075746d8c33d4e8f4ded17604034c1fcd1c78996ef52bf66ff"; + src = fetchFromGitHub { + owner = pname; + repo = pname; + rev = "v${version}"; + sha256 = "1sjvqaxb54nmqljiw5bg1423msa9rg015wiix9fsm6djk3wpklmk"; }; - checkInputs = [ nose rednose ]; - propagatedBuildInputs = [ - paramiko lxml selectors2 + paramiko + lxml + selectors2 ]; - checkPhase = '' - nosetests test --rednose --verbosity=3 --with-coverage --cover-package ncclient - ''; + checkInputs = [ + pytestCheckHook + ]; - #Unfortunately the test hangs at te end - doCheck = false; + pythonImportsCheck = [ "ncclient" ]; meta = with lib; { homepage = "https://github.com/ncclient/ncclient"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nclib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nclib/default.nix index 0e15bfb6cc..e28dbefca9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nclib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nclib/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "nclib"; - version = "1.0.0"; + version = "1.0.1"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "0kf8x30lrwhijab586i54g70s3sxvm2945al48zj27grj0pagh7g"; + sha256 = "9d41adb7df01a3fead10bc9698a175936b263d6bd18997078ed17e4fa61734d1"; }; # Project has no tests diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ndms2-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ndms2-client/default.nix new file mode 100644 index 0000000000..d29946a568 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/ndms2-client/default.nix @@ -0,0 +1,30 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "ndms2-client"; + version = "0.1.1"; + + src = fetchFromGitHub { + owner = "foxel"; + repo = "python_ndms2_client"; + rev = version; + sha256 = "1sc39d10hm1y8xf3gdqzq1akrx94k590l106242j9bvfqyr8lrk9"; + }; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "ndms2_client" ]; + + meta = with lib; { + description = "Keenetic NDMS 2.x and 3.x client"; + homepage = "https://github.com/foxel/python_ndms2_client"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/netdisco/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/netdisco/default.nix index dd17a3f6c1..08dc44a95c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/netdisco/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/netdisco/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "netdisco"; - version = "2.8.3"; + version = "2.9.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "sha256-4WS9PiErB6U7QuejTvbrOmnHetbE5S4zaUyhLCbyihM="; + sha256 = "sha256-OpLFM+0ZmhggJ1SuLoSO+qWLcKcpS65sd7u2zkzPys4="; }; propagatedBuildInputs = [ requests zeroconf ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/netifaces/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/netifaces/default.nix index b7b28c678e..66feb7be02 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/netifaces/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/netifaces/default.nix @@ -4,12 +4,12 @@ }: buildPythonPackage rec { - version = "0.10.9"; + version = "0.11.0"; pname = "netifaces"; src = fetchPypi { inherit pname version; - sha256 = "2dee9ffdd16292878336a58d04a20f0ffe95555465fee7c9bd23b3490ef2abf3"; + sha256 = "043a79146eb2907edf439899f262b3dfe41717d34124298ed281139a8b93ca32"; }; doCheck = false; # no tests implemented diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nettigo-air-monitor/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nettigo-air-monitor/default.nix new file mode 100644 index 0000000000..9cf8618bb3 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/nettigo-air-monitor/default.nix @@ -0,0 +1,50 @@ +{ lib +, aiohttp +, aioresponses +, buildPythonPackage +, fetchFromGitHub +, pytest-asyncio +, pytest-error-for-skips +, pytestCheckHook +, pythonOlder +}: + +buildPythonPackage rec { + pname = "nettigo-air-monitor"; + version = "0.2.6"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "bieniu"; + repo = pname; + rev = version; + sha256 = "0zs14g02m1ahyrhl2ihk74fp390g4672r1jjiaawmkxrvib07dvp"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + checkInputs = [ + aioresponses + pytest-asyncio + pytest-error-for-skips + pytestCheckHook + ]; + + postPatch = '' + substituteInPlace setup.py \ + --replace "pytest-runner" "" + substituteInPlace setup.cfg \ + --replace "--cov --cov-report term-missing " "" + ''; + + pythonImportsCheck = [ "nettigo_air_monitor" ]; + + meta = with lib; { + description = "Python module to get air quality data from Nettigo Air Monitor devices"; + homepage = "https://github.com/bieniu/nettigo-air-monitor"; + license = with licenses; [ asl20 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/networkx/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/networkx/default.nix index 27f6082ac5..c92db16fc6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/networkx/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/networkx/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "networkx"; # upgrade may break sage, please test the sage build or ping @timokau on upgrade - version = "2.5"; + version = "2.5.1"; src = fetchPypi { inherit pname version; - sha256 = "7978955423fbc9639c10498878be59caf99b44dc304c2286162fd24b458c1602"; + sha256 = "109cd585cac41297f71103c3c42ac6ef7379f29788eb54cb751be5a663bb235a"; }; propagatedBuildInputs = [ decorator setuptools ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nexia/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nexia/default.nix index dbd1c798a3..14b888428a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nexia/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nexia/default.nix @@ -9,14 +9,14 @@ buildPythonPackage rec { pname = "nexia"; - version = "0.9.6"; + version = "0.9.7"; disabled = pythonOlder "3.5"; src = fetchFromGitHub { owner = "bdraco"; repo = pname; rev = version; - sha256 = "1k8h1p2zqm8gghff03jh8q3zik7jw2l686cyyg36r3qrgz6zi19q"; + sha256 = "sha256-1oBrDr8QAUe6LLBliR/sNwDlLuisxOWPeI9sxuJtGxU="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nextcloudmonitor/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nextcloudmonitor/default.nix new file mode 100644 index 0000000000..d8e05f8459 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/nextcloudmonitor/default.nix @@ -0,0 +1,33 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, requests +}: + +buildPythonPackage rec { + pname = "nextcloudmonitor"; + version = "1.2.0"; + + src = fetchFromGitHub { + owner = "meichthys"; + repo = "nextcloud_monitor"; + rev = "v${version}"; + sha256 = "0b0c7gzx1d5kgbsfj1lbrqsirc5g5br6v8w2njaj1ys03kj669cx"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "nextcloudmonitor" ]; + + meta = with lib; { + description = "Python wrapper around nextcloud monitor api"; + homepage = "https://github.com/meichthys/nextcloud_monitor"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nilearn/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nilearn/default.nix index 39edd7e34d..6e3158b279 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nilearn/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nilearn/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "nilearn"; - version = "0.7.1"; + version = "0.8.0"; src = fetchPypi { inherit pname version; - sha256 = "8b1409a5e1f0f6d1a1f02555c2f11115a2364f45f1e57bcb5fb3c9ea11f346fa"; + sha256 = "f2d3dc81005f829f3a183efa6c90d698ea6818c06264d2e3f03e805c4340febb"; }; checkInputs = [ pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nipy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nipy/default.nix index 6229baef32..5bdf6fdcd4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nipy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nipy/default.nix @@ -12,13 +12,13 @@ }: buildPythonPackage rec { - version = "0.4.2"; + version = "0.5.0"; pname = "nipy"; disabled = pythonOlder "2.6"; src = fetchPypi { inherit pname version; - sha256 = "1pn731nsczrx198i2gadffqmfbhviglrclv6xxwhnbv6w5hfs2yk"; + sha256 = "a8a2c97ce854fece4aced5a6394b9fdca5846150ad6d2a36b86590924af3c848"; }; buildInputs = lib.optional doCheck [ nose ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nipype/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nipype/default.nix index 5f847007bd..3d72748a1e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nipype/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nipype/default.nix @@ -49,12 +49,12 @@ in buildPythonPackage rec { pname = "nipype"; - version = "1.6.0"; + version = "1.6.1"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "bc56ce63f74c9a9a23c6edeaf77631377e8ad2bea928c898cc89527a47f101cf"; + sha256 = "8428cfc633d8e3b8c5650e241e9eedcf637b7969bcd40f3423334d4c6b0992b5"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nltk/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nltk/default.nix index c87a935a30..253ac874ea 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nltk/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nltk/default.nix @@ -6,13 +6,13 @@ }: buildPythonPackage rec { - version = "3.5"; + version = "3.6.2"; pname = "nltk"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "845365449cd8c5f9731f7cb9f8bd6fd0767553b9d53af9eb1b3abf7700936b35"; + sha256 = "57d556abed621ab9be225cc6d2df1edce17572efb67a3d754630c9f8381503eb"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nodeenv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nodeenv/default.nix index 821a2d1bcc..d88661ae75 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nodeenv/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nodeenv/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "nodeenv"; - version = "1.5.0"; + version = "1.6.0"; src = fetchPypi { inherit pname version; - sha256 = "ab45090ae383b716c4ef89e690c41ff8c2b257b85b309f01f3654df3d084bd7c"; + sha256 = "3ef13ff90291ba2a4a7a4ff9a979b63ffdd00a464dbe04acf0ea6471517a4c2b"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/notebook/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/notebook/default.nix index c7dc40d707..435b4f1376 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/notebook/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/notebook/default.nix @@ -27,12 +27,12 @@ buildPythonPackage rec { pname = "notebook"; - version = "6.3.0"; + version = "6.4.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "cbc9398d6c81473e9cdb891d2cae9c0d3718fca289dda6d26df5cb660fcadc7d"; + sha256 = "9c4625e2a2aa49d6eae4ce20cbc3d8976db19267e32d2a304880e0c10bf8aef9"; }; LC_ALL = "en_US.utf8"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/notify-py/darwin-paths.patch b/third_party/nixpkgs/pkgs/development/python-modules/notify-py/darwin-paths.patch new file mode 100644 index 0000000000..3088825b9b --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/notify-py/darwin-paths.patch @@ -0,0 +1,13 @@ +diff --git a/notifypy/os_notifiers/macos.py b/notifypy/os_notifiers/macos.py +index 68731fb..53fcee3 100644 +--- a/notifypy/os_notifiers/macos.py ++++ b/notifypy/os_notifiers/macos.py +@@ -75,7 +75,7 @@ class MacOSNotifier(BaseNotifier): + def _find_installed_afplay(): + """Function to find the path for afplay""" + try: +- run_which_for_aplay = subprocess.check_output(["which", "afplay"]) ++ run_which_for_aplay = subprocess.check_output(["@which@", "afplay"]) + return run_which_for_aplay.decode("utf-8") + except subprocess.CalledProcessError: + logger.exception("Unable to find aplay.") diff --git a/third_party/nixpkgs/pkgs/development/python-modules/notify-py/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/notify-py/default.nix index ea9f0485be..497b20d3df 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/notify-py/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/notify-py/default.nix @@ -1,5 +1,17 @@ -{ lib, stdenv, buildPythonPackage, fetchFromGitHub, isPy3k, coreutils, alsaUtils -, libnotify, which, jeepney, loguru, pytestCheckHook }: +{ lib +, stdenv +, buildPythonPackage +, isPy3k +, fetchFromGitHub +, substituteAll +, alsa-utils +, libnotify +, which +, jeepney +, loguru +, pytestCheckHook +, coreutils +}: buildPythonPackage rec { pname = "notify-py"; @@ -14,15 +26,28 @@ buildPythonPackage rec { sha256 = "1n35adwsyhz304n4ifnsz6qzkymwhyqc8sg8d76qv5psv2xsnzlf"; }; - propagatedNativeBuildInputs = [ which ] - ++ lib.optionals stdenv.isLinux [ alsaUtils libnotify ]; + patches = lib.optionals stdenv.isLinux [ + # hardcode paths to aplay and notify-send + (substituteAll { + src = ./linux-paths.patch; + aplay = "${alsa-utils}/bin/aplay"; + notifysend = "${libnotify}/bin/notify-send"; + }) + ] ++ lib.optionals stdenv.isDarwin [ + # hardcode path to which + (substituteAll { + src = ./darwin-paths.patch; + which = "${which}/bin/which"; + }) + ]; + propagatedBuildInputs = [ loguru ] ++ lib.optionals stdenv.isLinux [ jeepney ]; - checkInputs = [ coreutils pytestCheckHook ]; + checkInputs = [ pytestCheckHook ]; # Tests search for "afplay" binary which is built in to MacOS and not available in nixpkgs - preCheck = '' + preCheck = lib.optionalString stdenv.isDarwin '' mkdir $TMP/bin ln -s ${coreutils}/bin/true $TMP/bin/afplay export PATH="$TMP/bin:$PATH" @@ -31,9 +56,9 @@ buildPythonPackage rec { pythonImportsCheck = [ "notifypy" ]; meta = with lib; { - description = "Python Module for sending cross-platform desktop notifications on Windows, macOS, and Linux."; - homepage = "https://github.com/ms7m/notify-py/"; + description = "Cross-platform desktop notification library for Python"; + homepage = "https://github.com/ms7m/notify-py"; license = licenses.mit; - maintainers = with maintainers; [ austinbutler ]; + maintainers = with maintainers; [ austinbutler dotlambda ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/notify-py/linux-paths.patch b/third_party/nixpkgs/pkgs/development/python-modules/notify-py/linux-paths.patch new file mode 100644 index 0000000000..f043ec14a4 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/notify-py/linux-paths.patch @@ -0,0 +1,54 @@ +diff --git a/notifypy/os_notifiers/linux.py b/notifypy/os_notifiers/linux.py +index ee89216..5201574 100644 +--- a/notifypy/os_notifiers/linux.py ++++ b/notifypy/os_notifiers/linux.py +@@ -53,30 +53,12 @@ class LinuxNotifierLibNotify(BaseNotifier): + @staticmethod + def _find_installed_aplay(): + """Function to find the path for notify-send""" +- try: +- run_which_for_aplay = subprocess.check_output(["which", "aplay"]) +- return run_which_for_aplay.decode("utf-8") +- except subprocess.CalledProcessError: +- logger.exception("Unable to find aplay.") +- return False +- except Exception: +- logger.exception("Unhandled exception for finding aplay.") +- return False ++ return "@aplay@" + + @staticmethod + def _find_installed_notify_send(): + """Function to find the path for notify-send""" +- try: +- run_which_for_notify_send = subprocess.check_output( +- ["which", "notify-send"] +- ) +- return run_which_for_notify_send.decode("utf-8") +- except subprocess.CalledProcessError: +- logger.exception("Unable to find notify-send.") +- return False +- except Exception: +- logger.exception("Unhandled exception for finding notify-send.") +- return False ++ return "@notifysend@" + + def send_notification( + self, +@@ -159,15 +141,7 @@ class LinuxNotifier(BaseNotifier): + @staticmethod + def _find_installed_aplay(): + """Function to find the path for notify-send""" +- try: +- run_which_for_aplay = subprocess.check_output(["which", "aplay"]) +- return run_which_for_aplay.decode("utf-8") +- except subprocess.CalledProcessError: +- logger.exception("Unable to find aplay.") +- return False +- except Exception: +- logger.exception("Unhandled exception for finding aplay.") +- return False ++ return "@aplay@" + + def send_notification( + self, diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nsapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nsapi/default.nix new file mode 100644 index 0000000000..453eeb2c95 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/nsapi/default.nix @@ -0,0 +1,37 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, future +, pythonOlder +, pytz +}: + +buildPythonPackage rec { + pname = "nsapi"; + version = "3.0.5"; + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "aquatix"; + repo = "ns-api"; + rev = "v${version}"; + sha256 = "0i1zkvi4mrhkh1gxzpa54mq8mb76s9nf3jxxhpqia56nkq8f8krb"; + }; + + propagatedBuildInputs = [ + future + pytz + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "ns_api" ]; + + meta = with lib; { + description = "Python module to query routes of the Dutch railways"; + homepage = "https://github.com/aquatix/ns-api/"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ntplib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ntplib/default.nix index be8a370f3f..399d27695a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ntplib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ntplib/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "ntplib"; - version = "0.3.4"; + version = "0.4.0"; src = fetchPypi { inherit pname version; - sha256 = "9fc99f71b14641b31698e4ced3d5f974eec225bfbae089ebe44b5808ba890f71"; + sha256 = "899d8fb5f8c2555213aea95efca02934c7343df6ace9d7628a5176b176906267"; }; # Require networking diff --git a/third_party/nixpkgs/pkgs/development/python-modules/numba/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/numba/default.nix index c49a4105ab..e4af2ddadb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/numba/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/numba/default.nix @@ -12,14 +12,14 @@ }: buildPythonPackage rec { - version = "0.53.0"; + version = "0.53.1"; pname = "numba"; # uses f-strings, python 3.9 is not yet supported disabled = pythonOlder "3.6" || pythonAtLeast "3.9"; src = fetchPypi { inherit pname version; - sha256 = "55c11d7edbba2ba715f2b56f5294cad55cfd87bff98e2627c3047c2d5cc52d16"; + sha256 = "9cd4e5216acdc66c4e9dab2dfd22ddb5bef151185c070d4a3cd8e78638aff5b0"; }; NIX_CFLAGS_COMPILE = lib.optionalString stdenv.isDarwin "-I${lib.getDev libcxx}/include/c++/v1"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/numcodecs/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/numcodecs/default.nix index ca31e34d29..ab529e0439 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/numcodecs/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/numcodecs/default.nix @@ -13,12 +13,12 @@ buildPythonPackage rec { pname = "numcodecs"; - version = "0.7.3"; + version = "0.8.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "022b12ad83eb623ec53f154859d49f6ec43b15c36052fa864eaf2d9ee786dd85"; + sha256 = "7c7d0ea56b5e2a267ae785bdce47abed62829ef000f03be8e32e30df62d3749c"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/numpy-stl/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/numpy-stl/default.nix index 2176b5f949..53577567bf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/numpy-stl/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/numpy-stl/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "numpy-stl"; - version = "2.15.1"; + version = "2.16.0"; src = fetchPypi { inherit pname version; - sha256 = "f57fdb3c0e420f729dbe54ec3add9bdbbd19b62183aa8f4576e00e5834b2ef52"; + sha256 = "411c633d2a03c295d98fb26023a6e7f574ceead04015d06e80cdab20b630a742"; }; checkInputs = [ pytest pytestrunner ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/numpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/numpy/default.nix index c5f6053058..dbbd750acf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/numpy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/numpy/default.nix @@ -40,14 +40,14 @@ let }; in buildPythonPackage rec { pname = "numpy"; - version = "1.20.2"; + version = "1.20.3"; format = "pyproject.toml"; disabled = pythonOlder "3.7"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "1vkc1739lwqx0n9dwxzmy18axlz22za034xa8jh0lmfpbazj52c7"; + sha256 = "e55185e51b18d788e49fe8305fd73ef4470596b33fc2c1ceb304566b99c71a69"; }; patches = lib.optionals python.hasDistutilsCxxPatch [ @@ -75,8 +75,6 @@ in buildPythonPackage rec { enableParallelBuilding = true; - doCheck = !isPyPy; # numpy 1.16+ hits a bug in pypy's ctypes, using either numpy or pypy HEAD fixes this (https://github.com/numpy/numpy/issues/13807) - checkInputs = [ pytest hypothesis diff --git a/third_party/nixpkgs/pkgs/development/python-modules/nunavut/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/nunavut/default.nix index 5bb173b915..e8d032e16a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/nunavut/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/nunavut/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "nunavut"; - version = "1.0.3"; + version = "1.2.2"; disabled = pythonOlder "3.5"; # only python>=3.5 is supported src = fetchPypi { inherit pname version; - sha256 = "474392035e9e20b2c74dced7df8bda135fd5c0ead2b2cf64523a4968c785ea73"; + sha256 = "78ab56951172ecd92f9b66dbf9b0ea986dcc6899d462eeef74563ddf33a5a9a5"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ofxparse/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ofxparse/default.nix index 33d027f1be..a364c7393b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ofxparse/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ofxparse/default.nix @@ -1,6 +1,6 @@ { lib , buildPythonPackage -, fetchFromGitHub +, fetchPypi , six , beautifulsoup4 , lxml @@ -8,15 +8,11 @@ buildPythonPackage rec { pname = "ofxparse"; - version = "unstable-2020-02-05"; + version = "0.21"; - # The newer changes haven't been released yet and ledger-autosync - # depends on them: - src = fetchFromGitHub { - owner = "jseutter"; - repo = "ofxparse"; - rev = "3236cfd96434feb6bc79a8b66f3400f18e2ad3c4"; - sha256 = "1rkp174102q7hwjrg3na0qnfd612xb3r360b9blkbprjhzxy7gr7"; + src = fetchPypi { + inherit pname version; + sha256 = "19y4sp5l9jqiqzzlbqdfiab42qx7d84n4xm4s7jfq397666vcyh5"; }; propagatedBuildInputs = [ six beautifulsoup4 lxml ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/openapi-core/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/openapi-core/default.nix new file mode 100644 index 0000000000..e41f7fd580 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/openapi-core/default.nix @@ -0,0 +1,81 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, isodate +, dictpath +, openapi-spec-validator +, openapi-schema-validator +, six +, lazy-object-proxy +, attrs +, werkzeug +, parse +, more-itertools +, pytestCheckHook +, falcon +, flask +, django +, djangorestframework +, responses +}: + +buildPythonPackage rec { + pname = "openapi-core"; + version = "0.14.2"; + + src = fetchFromGitHub { + owner = "p1c2u"; + repo = "openapi-core"; + rev = version; + sha256 = "1npsibyf8zx6z230yl19kyap8g25kqvgm7z1w6rm6jxv58yqsp7r"; + }; + + postPatch = '' + sed -i "/^addopts/d" setup.cfg + ''; + + propagatedBuildInputs = [ + isodate + dictpath + openapi-spec-validator + openapi-schema-validator + six + lazy-object-proxy + attrs + werkzeug + parse + more-itertools + ]; + + checkInputs = [ + pytestCheckHook + falcon + flask + django + djangorestframework + responses + ]; + + disabledTestPaths = [ + # AttributeError: 'str' object has no attribute '__name__' + "tests/integration/validation" + ]; + + disabledTests = [ + # TypeError: Unexpected keyword arguments passed to pytest.raises: message + "test_string_format_invalid_value" + ]; + + pythonImportsCheck = [ + "openapi_core" + "openapi_core.validation.request.validators" + "openapi_core.validation.response.validators" + ]; + + meta = with lib; { + description = "Client-side and server-side support for the OpenAPI Specification v3"; + homepage = "https://github.com/p1c2u/openapi-core"; + license = licenses.bsd3; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/openapi-spec-validator/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/openapi-spec-validator/default.nix index 88455e7261..b431ef5075 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/openapi-spec-validator/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/openapi-spec-validator/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "openapi-spec-validator"; - version = "0.3.0"; + version = "0.3.1"; src = fetchPypi { inherit pname version; - sha256 = "53ba3d884e98ff2062d5ada025aa590541dcd665b8f81067dc82dd61c0923759"; + sha256 = "3d70e6592754799f7e77a45b98c6a91706bdd309a425169d17d8e92173e198a2"; }; propagatedBuildInputs = [ jsonschema openapi-schema-validator pyyaml six setuptools ] diff --git a/third_party/nixpkgs/pkgs/development/python-modules/openhomedevice/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/openhomedevice/default.nix index 625980b3b9..57c0182abd 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/openhomedevice/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/openhomedevice/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "openhomedevice"; - version = "1.0.0"; + version = "2.0.1"; disabled = pythonOlder "3.5"; src = fetchFromGitHub { owner = "bazwilliams"; repo = pname; rev = version; - sha256 = "04qdlyzc8xsk7qxyn9l59pbwnlw49zknw0r5lqwx402va12g4ra0"; + sha256 = "sha256-BQgwXg15+xEGfPm0HJWpKXbNuCgc0VcAD5AuVSDXd8g="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/optuna/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/optuna/default.nix index 78694618f7..0b496b5ef0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/optuna/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/optuna/default.nix @@ -30,14 +30,14 @@ buildPythonPackage rec { pname = "optuna"; - version = "2.6.0"; + version = "2.8.0"; disabled = isPy27; src = fetchFromGitHub { owner = "optuna"; repo = pname; rev = "v${version}"; - sha256 = "11mskhb7i55i04cy0vkxi7kpaifbz8zc2m8x9s5y6yyyjinvly36"; + sha256 = "1w5vyl36mbk78a5028qa7dlzhavrs1dkx3q8m50ij37pa5cnyksz"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/orvibo/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/orvibo/default.nix index 6209baa144..17a3a76911 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/orvibo/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/orvibo/default.nix @@ -6,7 +6,7 @@ , pytest-runner , pytestCheckHook , requests -, websocket_client +, websocket-client }: buildPythonPackage rec { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/owslib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/owslib/default.nix index 661754d89c..3ccd3d916b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/owslib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/owslib/default.nix @@ -1,11 +1,11 @@ { lib, buildPythonPackage, fetchPypi, dateutil, requests, pytz, pyproj , pytest, pyyaml } : buildPythonPackage rec { pname = "OWSLib"; - version = "0.23.0"; + version = "0.24.1"; src = fetchPypi { inherit pname version; - sha256 = "0a03a9978673f377df45107024e2aae006f85afe7ef7bf4640ef663167a4386f"; + sha256 = "4973c2ba65ec850a3fcc1fb94cefe5ed2fed83aaf2a5e2135c78810ad2a8f0e1"; }; buildInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/packet-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/packet-python/default.nix index 1552148ae3..1bbb713f40 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/packet-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/packet-python/default.nix @@ -12,10 +12,10 @@ buildPythonPackage rec { pname = "packet-python"; - version = "1.43.1"; + version = "1.44.0"; src = fetchPypi { inherit pname version; - sha256 = "e333fb5ce45a3f283ddeb6261d061b39328b82eb440a89233fa08ce3fec2fcf0"; + sha256 = "4af12f2fbcc9713878ab4ed571e9fda028bc68add34cde0e7226af4d833a4d38"; }; nativeBuildInputs = [ pytestrunner ]; propagatedBuildInputs = [ requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pandas/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pandas/default.nix index f3505e3c9a..2d50201682 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pandas/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pandas/default.nix @@ -33,11 +33,11 @@ buildPythonPackage rec { pname = "pandas"; - version = "1.2.3"; + version = "1.2.4"; src = fetchPypi { inherit pname version; - sha256 = "078b4nncn6778ymmqn80j2q6n7fcs4d6bbaraar5nypgbaw10vyz"; + sha256 = "649ecab692fade3cbfcf967ff936496b0cfba0af00a55dfaacd82bdda5cb2279"; }; nativeBuildInputs = [ cython ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/panflute/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/panflute/default.nix index da08b858b1..332c4c16bd 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/panflute/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/panflute/default.nix @@ -7,14 +7,14 @@ }: buildPythonPackage rec{ - version = "2.0.5"; + version = "2.1.0"; pname = "panflute"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "1ssmqcyr91f0gpl49lz6a9jkl17l06h6qcik24rlmva28ii6aszz"; + sha256 = "8a3d5dd2a10c3aa6fa8167713fedb47400f0e8ae6ea8346fd4b599842bb1882d"; }; propagatedBuildInputs = [ click pyyaml ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/parfive/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/parfive/default.nix index 7b32cbb55b..b525c39de2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/parfive/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/parfive/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "parfive"; - version = "1.2.0"; + version = "1.3.0"; src = fetchPypi { inherit pname version; - sha256 = "118a0994bbb9536fd4574995a8485b6c4b97db247c55bc86ae4f4ae8fd9b0add"; + sha256 = "c3067e6ca9d6fb88a10958338360bd9c47edfd8ab11098d4c601f7f2887edadd"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/parsel/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/parsel/default.nix index 319f83f727..423f4eb029 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/parsel/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/parsel/default.nix @@ -1,14 +1,13 @@ { lib , buildPythonPackage +, cssselect , fetchPypi -, pytest -, pytestrunner , functools32 +, isPy27 +, lxml +, pytestCheckHook , six , w3lib -, lxml -, cssselect -, isPy27 }: buildPythonPackage rec { @@ -20,17 +19,47 @@ buildPythonPackage rec { sha256 = "0yawf9r3r863lwxj0n89i7h3n8xjbsl5b7n6xg76r68scl5yzvvh"; }; - checkInputs = [ pytest pytestrunner ]; - propagatedBuildInputs = [ six w3lib lxml cssselect ] ++ lib.optionals isPy27 [ functools32 ]; + propagatedBuildInputs = [ + cssselect + lxml + six + w3lib + ] ++ lib.optionals isPy27 [ + functools32 + ]; - checkPhase = '' - py.test + checkInputs = [ + pytestCheckHook + ]; + + postPatch = '' + substituteInPlace setup.py \ + --replace "'pytest-runner'," "" ''; + disabledTests = [ + # Test are out-dated and are failing (AssertionError: Lists differ: ...) + # https://github.com/scrapy/parsel/pull/174 + "test_differences_parsing_xml_vs_html" + "test_nested_selectors" + "test_re" + "test_replacement_null_char_from_body" + "test_select_on_text_nodes" + "test_selector_get_alias" + "test_selector_getall_alias" + "test_selector_over_text" + "test_selectorlist_get_alias" + "test_selectorlist_getall_alias" + "test_slicing" + "test_text_pseudo_element" + ]; + + pythonImportsCheck = [ "parsel" ]; + meta = with lib; { homepage = "https://github.com/scrapy/parsel"; - description = "Parsel is a library to extract data from HTML and XML using XPath and CSS selectors"; + description = "Python library to extract data from HTML and XML using XPath and CSS selectors"; license = licenses.bsd3; + maintainers = with maintainers; [ fab ]; }; - } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/partd/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/partd/default.nix index 584b4b4315..9b5a94fa91 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/partd/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/partd/default.nix @@ -12,12 +12,12 @@ buildPythonPackage rec { pname = "partd"; - version = "1.1.0"; + version = "1.2.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "6e258bf0810701407ad1410d63d1a15cfd7b773fd9efe555dac6bb82cc8832b0"; + sha256 = "aa67897b84d522dcbc86a98b942afab8c6aa2f7f677d904a616b74ef5ddbc3eb"; }; checkInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/parts/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/parts/default.nix index 1bf7f26adf..83d7d7046f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/parts/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/parts/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "parts"; - version = "1.0.2"; + version = "1.0.3"; src = fetchPypi { inherit pname version; - sha256 = "1ym238hxwsw15ivvf6gzmkmla08b9hwhdyc3v6rs55wga9j3a4db"; + sha256 = "a4137612bc050f606b4d6f9e6a554ebfb50633c8dd9699481f82271f84d9425f"; }; # Project has no tests diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pastescript/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pastescript/default.nix index a526d38339..e7d8b84492 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pastescript/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pastescript/default.nix @@ -9,12 +9,12 @@ }: buildPythonPackage rec { - version = "3.2.0"; + version = "3.2.1"; pname = "PasteScript"; src = fetchPypi { inherit pname version; - sha256 = "9b0f5c0f1c6a510a353fa7c3dc4fdaab9071462d60d24573de76a001fbc172ac"; + sha256 = "f3ef819785e1b284e6fc108a131bce7e740b18255d96cd2e99ee3f00fd452468"; }; buildInputs = [ nose ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/patiencediff/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/patiencediff/default.nix index 921fbe4c43..0d4e7d5134 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/patiencediff/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/patiencediff/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "patiencediff"; - version = "0.2.1"; + version = "0.2.2"; src = fetchPypi { inherit pname version; - sha256 = "0nm2242xgg59l06m54rzxp41aly3lxjh0a1s7h6dk7ryxjh002lv"; + sha256 = "456d9fc47fe43f9aea863059ea2c6df5b997285590e4b7f9ee8fbb6c3419b5a7"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pbr/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pbr/default.nix index 6b204a946b..9ce3d72a20 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pbr/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pbr/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pbr"; - version = "5.5.1"; + version = "5.6.0"; src = fetchPypi { inherit pname version; - sha256 = "5fad80b613c402d5b7df7bd84812548b2a61e9977387a80a5fc5c396492b13c9"; + sha256 = "42df03e7797b796625b1029c0400279c7c34fd7df24a7d7818a1abb5b38710dd"; }; # circular dependencies with fixtures diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pdf2image/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pdf2image/default.nix index 4eddc028a2..43a319716e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pdf2image/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pdf2image/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "pdf2image"; - version = "1.14.0"; + version = "1.15.1"; propagatedBuildInputs = [ pillow poppler_utils ]; src = fetchPypi { inherit pname version; - sha256 = "066527e1bf954762fb4369c677ae3bc15f2ce8707eee830cccef8471fde736d7"; + sha256 = "aa6013c1b5b25ceb90caa34834f1ed343e969cfa532100e1472cfe0e96a639b5"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pdftotext/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pdftotext/default.nix index a52160363d..400dc76c0d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pdftotext/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pdftotext/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pdftotext"; - version = "2.1.5"; + version = "2.1.6"; src = fetchPypi { inherit pname version; - sha256 = "98aeb8b07a4127e1a30223bd933ef080bbd29aa88f801717ca6c5618380b8aa6"; + sha256 = "caf8ddbaeaf0a5897f07655a71747242addab2e695e84c5d47f2ea92dfe2a594"; }; buildInputs = [ poppler ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pdunehd/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pdunehd/default.nix new file mode 100644 index 0000000000..63eca0dab8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pdunehd/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, requests +}: + +buildPythonPackage rec { + pname = "pdunehd"; + version = "1.3.2"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "valentinalexeev"; + repo = "pdunehd"; + rev = version; + sha256 = "06p0k82nf89rsakr8d2hdb19dp1wqp9bsf54lwb0qma47iakljjh"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "pdunehd" ]; + + meta = with lib; { + description = "Python wrapper for Dune HD media player API"; + homepage = "https://github.com/valentinalexeev/pdunehd"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pecan/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pecan/default.nix index d19fc10113..d610561b3e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pecan/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pecan/default.nix @@ -1,5 +1,6 @@ { lib , fetchPypi +, fetchpatch , buildPythonPackage , isPy27 # Python deps @@ -28,6 +29,14 @@ buildPythonPackage rec { sha256 = "4b2acd6802a04b59e306d0a6ccf37701d24376f4dc044bbbafba3afdf9d3389a"; }; + patches = [ + (fetchpatch { + name = "Support-SQLAlchemy-1.4x.patch"; + url = "https://github.com/pecan/pecan/commit/a520bd544c0b02a02dbf692b8d6e2f7a503ee6d4.patch"; + sha256 = "sha256-QCHRjwnpy8ndCvcuyE5Y65BybKYthJXDySUtmpJD8gY="; + }) + ]; + propagatedBuildInputs = [ logutils Mako @@ -51,8 +60,9 @@ buildPythonPackage rec { ]; meta = with lib; { - description = "Pecan"; - homepage = "http://www.pecanpy.org/"; + description = "WSGI object-dispatching web framework, designed to be lean and fast"; + homepage = "https://www.pecanpy.org/"; changelog = "https://pecan.readthedocs.io/en/latest/changes.html"; + maintainers = with maintainers; [ applePrincess ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/perfplot/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/perfplot/default.nix index 70af6cc9c8..76f2f8d293 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/perfplot/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/perfplot/default.nix @@ -13,14 +13,14 @@ buildPythonPackage rec { pname = "perfplot"; - version = "0.8.10"; + version = "0.9.5"; disabled = isPy27; src = fetchFromGitHub { owner = "nschloe"; repo = "perfplot"; rev = "v${version}"; - sha256 = "17xx33fk95fpkd8h2whblpwfls9vyqbv7anq34kpigjy8zxfi2qk"; + sha256 = "1nr31a7qvipqjycw2flkabnhnc4drbi1xpjm8yjxw2gjzznd1jg4"; }; format = "pyproject"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/periodictable/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/periodictable/default.nix index ea42f7ea7f..783d85b6c0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/periodictable/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/periodictable/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "periodictable"; - version = "1.5.3"; + version = "1.6.0"; propagatedBuildInputs = [numpy pyparsing]; src = fetchPypi { inherit pname version; - sha256 = "1d09c359468e2de74b43fc3a7dcb0d3d71e0ff53adb85995215d8d7796451af6"; + sha256 = "52e925220005c20e97601e7b04ad6cebc271680947ab9adcbb1a796ddbaa0f23"; }; checkInputs = [ pytestcov pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/persim/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/persim/default.nix index 2868cea4ae..4ac21159d9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/persim/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/persim/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "persim"; - version = "0.3.0"; + version = "0.3.1"; src = fetchPypi { inherit pname version; - sha256 = "5db2f7f65b1ad7b2cbfa254afb692ca0a91aeb686e82d6905838c41f516e6a13"; + sha256 = "ef0f0a247adcf6104ecac14117db0b24581710ea8a8d964816805395700b4975"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/persistent/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/persistent/default.nix index 07ba3ecd1c..f8ba8d3cf2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/persistent/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/persistent/default.nix @@ -7,14 +7,14 @@ buildPythonPackage rec { pname = "persistent"; - version = "4.6.4"; + version = "4.7.0"; nativeBuildInputs = [ sphinx manuel ]; propagatedBuildInputs = [ zope_interface cffi ]; src = fetchPypi { inherit pname version; - sha256 = "f83f54355a44cf8ec38c29ce47b378a8c70444e9a745581dbb13d201a24cb546"; + sha256 = "0ef7c05a6dca0104dc224fe7ff31feb30a63d970421c9462104a4752148ac333"; }; meta = { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pex/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pex/default.nix index f8374a02a9..7f65b19bba 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pex/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pex/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "pex"; - version = "2.1.34"; + version = "2.1.42"; src = fetchPypi { inherit pname version; - sha256 = "988e6a4e12933522e0c647da78c6e30fc42e3a172ba52cfb0332affcfc9ee29e"; + sha256 = "2deb088a3943891d07f9871e47409407e6308fbff3ee9514a0238791dc8da99f"; }; nativeBuildInputs = [ setuptools ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pg8000/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pg8000/default.nix index 958d3b7655..5560e918ac 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pg8000/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pg8000/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "pg8000"; - version = "1.19.4"; + version = "1.19.5"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-fJxtV1QbDyFT4jqNdZzrPXy5MIkY+6atnpL44OWpC8g="; + sha256 = "sha256-3LmvucuHrMeTiK5jPEXPf4Bqq+O7XYzxVFcraZOT+Tc="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pgspecial/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pgspecial/default.nix index c49d6bae31..308e8c9c8b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pgspecial/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pgspecial/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "pgspecial"; - version = "1.12.1"; + version = "1.13.0"; src = fetchPypi { inherit pname version; - sha256 = "b68feb0005f57861573d3fbb82c5c777950decfbb2d1624af57aec825db02c02"; + sha256 = "3847e205b19469f16ded05bda24b4758056d67ade4075a5ded4ce6628a9bad01"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/phonenumbers/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/phonenumbers/default.nix index 64884393b7..a7ab39c7c1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/phonenumbers/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/phonenumbers/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "phonenumbers"; - version = "8.12.20"; + version = "8.12.25"; src = fetchPypi { inherit pname version; - sha256 = "ee5a8508c4a414262abad92ec33f050347f681973ed0fb36e98b52bfe159f6b8"; + sha256 = "de4db4e2582f989a9cbae54364a647b24a72a7b0126be50d8356cf02217dc6c9"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/phonopy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/phonopy/default.nix index 1c401b6264..2ca29ffd8e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/phonopy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/phonopy/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "phonopy"; - version = "2.9.3"; + version = "2.10.0"; src = fetchPypi { inherit pname version; - sha256 = "389dd33f5bfe35733c8346af6cc43bbd015ccf0efa947eb04b38bd5cb9d0b89b"; + sha256 = "58485042ab7d88fc8b83744d18b2aefd677adb071c8a717ac3710458192743d7"; }; propagatedBuildInputs = [ numpy pyyaml matplotlib h5py spglib ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pikepdf/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pikepdf/default.nix index c536f4c69f..c5462a555b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pikepdf/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pikepdf/default.nix @@ -24,12 +24,12 @@ buildPythonPackage rec { pname = "pikepdf"; - version = "2.11.1"; + version = "2.12.2"; disabled = ! isPy3k; src = fetchPypi { inherit pname version; - sha256 = "0vs7qa3s4scfhyldfw99hhxpna6rj49rsbr2k0j6b4qx1bw8h141"; + sha256 = "5ff35499b1ae7b181277f78ce5b1bcc8d3009182bb389917791c5dc811fcc8e4"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pipx/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pipx/default.nix index e6f9242dde..c496017867 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pipx/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pipx/default.nix @@ -6,13 +6,12 @@ , argcomplete , packaging , importlib-metadata -, colorama , pytestCheckHook }: buildPythonPackage rec { pname = "pipx"; - version = "0.16.2.1"; + version = "0.16.3"; disabled = pythonOlder "3.6"; @@ -21,14 +20,13 @@ buildPythonPackage rec { owner = "pipxproject"; repo = pname; rev = version; - sha256 = "1agdp8j4lw6z0lk2vv1m8d49r5vwfkpal3hdgq67vnjyp9904pf6"; + sha256 = "1w5pzn5mgl9rr9zbmqza5is4mvjvcgjps1q9qa1mvbnyvakdkr4c"; }; propagatedBuildInputs = [ userpath argcomplete packaging - colorama ] ++ lib.optionals (pythonOlder "3.8") [ importlib-metadata ]; @@ -39,9 +37,17 @@ buildPythonPackage rec { export HOME=$(mktemp -d) ''; - # disable tests, which require internet connection - pytestFlagsArray = [ "--ignore=tests/test_install_all_packages.py" ]; + pytestFlagsArray = [ + "--ignore=tests/test_install_all_packages.py" + # start local pypi server and use in tests + "--net-pypiserver" + ]; disabledTests = [ + # disable tests which are difficult to emulate due to shell manipulations + "path_warning" + "script_from_internet" + "ensure_null_pythonpath" + # disable tests, which require internet connection "install" "inject" "ensure_null_pythonpath" diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pkgconfig/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pkgconfig/default.nix index 098b79a15d..d51a83a054 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pkgconfig/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pkgconfig/default.nix @@ -2,7 +2,7 @@ buildPythonPackage rec { pname = "pkgconfig"; - version = "1.5.2"; + version = "1.5.4"; inherit (pkg-config) setupHooks @@ -14,7 +14,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "38d612488f0633755a2e7a8acab6c01d20d63dbc31af75e2a9ac98a6f638ca94"; + sha256 = "c34503829fd226822fd93c902b1cf275516908a023a24be0a02ba687f3a00399"; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/plaid-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/plaid-python/default.nix index 040b51b9f6..567fdd42d0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/plaid-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/plaid-python/default.nix @@ -1,12 +1,12 @@ { lib, buildPythonPackage, fetchPypi, requests, pytest }: buildPythonPackage rec { - version = "7.2.1"; + version = "7.4.0"; pname = "plaid-python"; src = fetchPypi { inherit pname version; - sha256 = "af2ad326e8377c8c86d97184f60c0be41cd71f5075201dfdb3331cc85d4de513"; + sha256 = "ab70467116adc110b56eb5a1fdeed726307cc216e04dda46a782aa1a1468ce0e"; }; checkInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/plexapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/plexapi/default.nix index dc832809c2..5c41c3308b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/plexapi/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/plexapi/default.nix @@ -3,7 +3,7 @@ , fetchFromGitHub , requests , tqdm -, websocket_client +, websocket-client , isPy27 }: @@ -22,7 +22,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ requests tqdm - websocket_client + websocket-client ]; # Tests require a running Plex instance diff --git a/third_party/nixpkgs/pkgs/development/python-modules/plone-testing/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/plone-testing/default.nix index c951800454..13114dd784 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/plone-testing/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/plone-testing/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "plone.testing"; - version = "8.0.2"; + version = "8.0.3"; src = fetchPypi { inherit pname version; - sha256 = "082b03aebe81d0bdcc44a917a795ae60d3add2c2abbee11e7c335fb13d5e7ca7"; + sha256 = "39bc23bbb59b765702090ad61fe579f8bd9fe1f005f4dd1c2988a5bd1a71faf0"; }; propagatedBuildInputs = [ six setuptools zope_testing ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pluginbase/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pluginbase/default.nix index 697717eeca..b8df04a1b3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pluginbase/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pluginbase/default.nix @@ -1,12 +1,12 @@ { lib, fetchPypi, buildPythonPackage, pytest }: buildPythonPackage rec { - version = "1.0.0"; + version = "1.0.1"; pname = "pluginbase"; src = fetchPypi { inherit pname version; - sha256 = "497894df38d0db71e1a4fbbfaceb10c3ef49a3f95a0582e11b75f8adaa030005"; + sha256 = "ff6c33a98fce232e9c73841d787a643de574937069f0d18147028d70d7dee287"; }; checkInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/plugwise/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/plugwise/default.nix index d62c2e8bb7..299e2af2f9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/plugwise/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/plugwise/default.nix @@ -19,13 +19,13 @@ buildPythonPackage rec { pname = "plugwise"; - version = "0.9.4"; + version = "0.10.0"; src = fetchFromGitHub { owner = pname; repo = "python-plugwise"; rev = version; - sha256 = "sha256-5r+Xe3EKLjuR7mPGEPOKzhE7G6OzNEClf847Px9VdWU="; + sha256 = "sha256-M0Zwao8I8PRxxF9xvtzFeCFK9+eMlXYcWJarfHSGAlw="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/plyfile/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/plyfile/default.nix index d3042c92e3..130fba959e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/plyfile/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/plyfile/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "plyfile"; - version = "0.7.3"; + version = "0.7.4"; src = fetchPypi { inherit pname version; - sha256 = "5ac55b685cfcb3e8f70f3c5c2660bd1f6431a892a5319a612792b1ec09aec0f0"; + sha256 = "9e9a18d22a3158fcd74df38761d43a7facc6df75126f2ab9f4e9a5d4d2188652"; }; propagatedBuildInputs = [ numpy ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pmsensor/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pmsensor/default.nix new file mode 100644 index 0000000000..1d64852f28 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pmsensor/default.nix @@ -0,0 +1,34 @@ +{ lib +, buildPythonPackage +, fetchPypi +, pyserial +}: + +buildPythonPackage rec { + pname = "pmsensor"; + version = "0.4"; + + src = fetchPypi { + inherit pname version; + sha256 = "7fc03aafb791ca70d847c9ab97cf181bc7d8f7345efb4b0c3f66c07b9c7dee69"; + }; + + propagatedBuildInputs = [ + pyserial + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ + "pmsensor.co2sensor" + "pmsensor.serial_pm" + ]; + + meta = with lib; { + description = "Library to read data from environment sensors"; + homepage = "https://github.com/open-homeautomation/pmsensor"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/polib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/polib/default.nix index 00353ac0cc..6190824e68 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/polib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/polib/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "polib"; - version = "1.1.0"; + version = "1.1.1"; src = fetchPypi { inherit pname version; - sha256 = "fad87d13696127ffb27ea0882d6182f1a9cf8a5e2b37a587751166c51e5a332a"; + sha256 = "e02c355ae5e054912e3b0d16febc56510eff7e49d60bf22aecb463bd2f2a2dfa"; }; # error: invalid command 'test' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pooch/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pooch/default.nix index de0ba14582..25efef9ef0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pooch/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pooch/default.nix @@ -2,6 +2,7 @@ , buildPythonPackage , isPy27 , fetchPypi +, setuptools-scm , pytestCheckHook , packaging , appdirs @@ -10,14 +11,16 @@ buildPythonPackage rec { pname = "pooch"; - version = "1.3.0"; + version = "1.4.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "30d448e825904e2d763bbbe418831a788813c32f636b21c8d60ee5f474532898"; + sha256 = "f827e79ab51b21a8964a4b1ea8972aa4a1079cb9c1ff8e9ec61893eb7dab50cb"; }; + nativeBuildInputs = [ setuptools-scm ]; + propagatedBuildInputs = [ packaging appdirs requests ]; preCheck = "HOME=$TMPDIR"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/portpicker/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/portpicker/default.nix index 30ac001556..90ed4b34b7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/portpicker/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/portpicker/default.nix @@ -5,11 +5,12 @@ buildPythonPackage rec { pname = "portpicker"; - version = "1.3.1"; + version = "1.4.0"; + format = "pyproject"; src = fetchPypi { inherit pname version; - sha256 = "0rwn5ca7ns3yh6bp785zdd2l4018ccpd5i0m2d1fsd9nhxvcgkfj"; + sha256 = "c2831ff4328a21e928ffc9e52124bcafacaf5816d38a1a72dc329680dc1bb7ba"; }; meta = { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/prance/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/prance/default.nix index f9d5b6f80b..b13808f1a9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/prance/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/prance/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "prance"; - version = "0.20.2"; + version = "0.21.2"; src = fetchPypi { inherit pname version; - sha256 = "4ffcddae6218cf6753a02af36ca9fb1c92eec4689441789ee2e9963230882388"; + sha256 = "43ebe3a5b38f0c65c428427004c4d8ce8d7155ddad50610276c89c192680f138"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/praw/6.3.nix b/third_party/nixpkgs/pkgs/development/python-modules/praw/6.3.nix index 3fc485c00e..242300949e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/praw/6.3.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/praw/6.3.nix @@ -9,7 +9,7 @@ , pytest , requests-toolbelt , update_checker -, websocket_client +, websocket-client }: buildPythonPackage rec { @@ -31,7 +31,7 @@ buildPythonPackage rec { mock prawcore update_checker - websocket_client + websocket-client ]; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/praw/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/praw/default.nix index 5047c1e88b..e104dbff4f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/praw/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/praw/default.nix @@ -9,25 +9,25 @@ , pytestCheckHook , requests-toolbelt , update_checker -, websocket_client +, websocket-client }: buildPythonPackage rec { pname = "praw"; - version = "7.2.0"; + version = "7.3.0"; src = fetchFromGitHub { owner = "praw-dev"; repo = pname; rev = "v${version}"; - sha256 = "sha256-/GV5ZhrJxeChcYwmH/9FsLceAYRSeTCDe4lMEwdTa8Y="; + sha256 = "0pj987v04y5askczlma2ilwllwfsg7p5mwhv0h1lcl1lg0fbsvn9"; }; propagatedBuildInputs = [ mock prawcore update_checker - websocket_client + websocket-client ]; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/prawcore/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/prawcore/default.nix index 1e38f401a4..686487c025 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/prawcore/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/prawcore/default.nix @@ -1,17 +1,25 @@ -{ lib, buildPythonPackage, fetchPypi, isPy27 +{ lib +, buildPythonPackage +, fetchPypi , requests -, testfixtures, mock, requests_toolbelt -, betamax, betamax-serializers, betamax-matchers, pytest +, testfixtures +, mock +, requests_toolbelt +, betamax +, betamax-serializers +, betamax-matchers +, pytestCheckHook +, pythonOlder }: buildPythonPackage rec { pname = "prawcore"; - version = "2.0.0"; - disabled = isPy27; # see https://github.com/praw-dev/prawcore/pull/101 + version = "2.2.0"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-tJjZtvVJkQBecn1SNcj0nqW6DJpteT+3Q7QPoInNNtE="; + sha256 = "bde42fad459c4dcfe0f22a18921ef4981ee7cd286ea1de3eb697ba91838c9123"; }; propagatedBuildInputs = [ @@ -25,18 +33,16 @@ buildPythonPackage rec { betamax-serializers betamax-matchers requests_toolbelt - pytest + pytestCheckHook ]; - checkPhase = '' - pytest - ''; + pythonImportsCheck = [ "prawcore" ]; meta = with lib; { description = "Low-level communication layer for PRAW"; homepage = "https://praw.readthedocs.org/"; - license = licenses.gpl3; + license = licenses.bsd2; platforms = platforms.all; - maintainers = with maintainers; [ ]; + maintainers = with maintainers; [ fab ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pre-commit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pre-commit/default.nix index 1b5af02dca..0cb853abf2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pre-commit/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pre-commit/default.nix @@ -1,11 +1,13 @@ -{ lib, fetchPypi, buildPythonPackage, pythonOlder +{ lib +, fetchPypi +, buildPythonPackage +, pythonOlder , aspy-yaml , cached-property , cfgv , identify , importlib-metadata , importlib-resources -, isPy27 , nodeenv , python , six @@ -15,13 +17,13 @@ buildPythonPackage rec { pname = "pre-commit"; - version = "2.11.0"; - disabled = isPy27; + version = "2.13.0"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit version; pname = "pre_commit"; - sha256 = "15f1chxrbmfcajk1ngk3jvf6jjbigb5dg66wnn7phmlywaawpy06"; + sha256 = "sha256-dklyxgaT3GaLqOhuspZU7DFEUBMQ9xmHQqdnvsOFo3g="; }; patches = [ @@ -53,6 +55,8 @@ buildPythonPackage rec { --subst-var-by nodeenv ${nodeenv} ''; + pythonImportsCheck = [ "pre_commit" ]; + meta = with lib; { description = "A framework for managing and maintaining multi-language pre-commit hooks"; homepage = "https://pre-commit.com/"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/premailer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/premailer/default.nix index c69ec9a05a..8523a47b71 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/premailer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/premailer/default.nix @@ -4,12 +4,12 @@ buildPythonPackage rec { pname = "premailer"; - version = "3.7.0"; + version = "3.9.0"; disabled = isPy27; # no longer compatible with urllib src = fetchPypi { inherit pname version; - sha256 = "5eec9603e84cee583a390de69c75192e50d76e38ef0292b027bd64923766aca7"; + sha256 = "da18b9e8cb908893b67ab9b7451276fef7c0ab179f40189378545f6bb0ab3695"; }; buildInputs = [ mock nose ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/privacyidea/fix-tests.patch b/third_party/nixpkgs/pkgs/development/python-modules/privacyidea/fix-tests.patch deleted file mode 100644 index 67c22d2052..0000000000 --- a/third_party/nixpkgs/pkgs/development/python-modules/privacyidea/fix-tests.patch +++ /dev/null @@ -1,28 +0,0 @@ -diff --git a/privacyidea/lib/resolvers/LDAPIdResolver.py b/privacyidea/lib/resolvers/LDAPIdResolver.py -index ae9d87764..cfc609931 100644 ---- a/privacyidea/lib/resolvers/LDAPIdResolver.py -+++ b/privacyidea/lib/resolvers/LDAPIdResolver.py -@@ -97,11 +97,6 @@ - SERVERPOOL_ROUNDS = 2 - # The number of seconds a non-responding server is removed from the server pool - SERVERPOOL_SKIP = 30 --# The number of seconds that ldap3 waits if no server is left in the pool, before --# starting the next round --pooling_loop_timeout = get_app_config_value("PI_LDAP_POOLING_LOOP_TIMEOUT", 10) --log.info("Setting system wide POOLING_LOOP_TIMEOUT to {0!s}.".format(pooling_loop_timeout)) --ldap3.set_config_parameter("POOLING_LOOP_TIMEOUT", pooling_loop_timeout) - - # 1 sec == 10^9 nano secs == 10^7 * (100 nano secs) - MS_AD_MULTIPLYER = 10 ** 7 -@@ -314,6 +309,11 @@ def __init__(self): - self.serverpool_rounds = SERVERPOOL_ROUNDS - self.serverpool_skip = SERVERPOOL_SKIP - self.serverpool = None -+ # The number of seconds that ldap3 waits if no server is left in the pool, before -+ # starting the next round -+ pooling_loop_timeout = get_app_config_value("PI_LDAP_POOLING_LOOP_TIMEOUT", 10) -+ log.info("Setting system wide POOLING_LOOP_TIMEOUT to {0!s}.".format(pooling_loop_timeout)) -+ ldap3.set_config_parameter("POOLING_LOOP_TIMEOUT", pooling_loop_timeout) - - def checkPass(self, uid, password): - """ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/process-tests/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/process-tests/default.nix index abf175b553..5f50b2a4d1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/process-tests/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/process-tests/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "process-tests"; - version = "2.1.1"; + version = "2.1.2"; src = fetchPypi { inherit pname version; - sha256 = "15yrgr1hb7i0fq31dh6k8hmc3jnk6yn5nh4xh3gmszk9vag5zrqk"; + sha256 = "a3747ad947bdfc93e5c986bdb17a6d718f3f26e8577a0807a00962f29e26deba"; }; # No tests diff --git a/third_party/nixpkgs/pkgs/development/python-modules/prometheus_client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/prometheus_client/default.nix index e4cf4e85af..7ce36e588d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/prometheus_client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/prometheus_client/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "prometheus_client"; - version = "0.9.0"; + version = "0.11.0"; src = fetchPypi { inherit pname version; - sha256 = "9da7b32f02439d8c04f7777021c304ed51d9ec180604700c1ba72a4d44dceb03"; + sha256 = "3a8baade6cb80bcfe43297e33e7623f3118d660d41387593758e2fb1ea173a86"; }; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/prompt_toolkit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/prompt_toolkit/default.nix index ac128c098e..266ac3c90c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/prompt_toolkit/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/prompt_toolkit/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "prompt_toolkit"; - version = "3.0.18"; + version = "3.0.19"; src = fetchPypi { inherit pname version; - sha256 = "e1b4f11b9336a28fa11810bc623c357420f69dfdb6d2dac41ca2c21a55c033bc"; + sha256 = "08360ee3a3148bdb5163621709ee322ec34fc4375099afa4bbf751e9b7b7fa4f"; }; checkPhase = '' py.test -k 'not test_pathcompleter_can_expanduser' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/psycopg2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/psycopg2/default.nix index 4e0a2771e9..1af8fd38ba 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/psycopg2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/psycopg2/default.nix @@ -1,25 +1,40 @@ -{ stdenv, lib, buildPythonPackage, isPyPy, fetchPypi, postgresql, openssl }: +{ stdenv +, lib +, buildPythonPackage +, pythonOlder +, isPyPy +, fetchPypi +, postgresql +, openssl +}: buildPythonPackage rec { pname = "psycopg2"; - version = "2.8.6"; + version = "2.9.1"; # Extension modules don't work well with PyPy. Use psycopg2cffi instead. # c.f. https://github.com/NixOS/nixpkgs/pull/104151#issuecomment-729750892 - disabled = isPyPy; + disabled = pythonOlder "3.6" || isPyPy; src = fetchPypi { inherit pname version; - sha256 = "fb23f6c71107c37fd667cb4ea363ddeb936b348bbd6449278eb92c189699f543"; + sha256 = "0z0v2d5gpgy0wf2ypqxv955c9k44yszd7r20km5s79yhy6k06lyy"; }; - buildInputs = lib.optional stdenv.isDarwin openssl; - nativeBuildInputs = [ postgresql ]; + nativeBuildInputs = [ + postgresql + ]; + buildInputs = lib.optionals stdenv.isDarwin [ + openssl + ]; + + # requires setting up a postgresql database doCheck = false; meta = with lib; { description = "PostgreSQL database adapter for the Python programming language"; - license = with licenses; [ gpl2 zpl20 ]; + homepage = "https://www.psycopg.org"; + license = with licenses; [ lgpl3 zpl20 ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pubnub/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pubnub/default.nix index c2f1a9fb34..89dd4d1cbf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pubnub/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pubnub/default.nix @@ -13,13 +13,13 @@ buildPythonPackage rec { pname = "pubnub"; - version = "5.1.1"; + version = "5.1.3"; src = fetchFromGitHub { owner = pname; repo = "python"; rev = "v${version}"; - sha256 = "sha256-ir8f8A6XuN1ZQIYQbArChLzTlYu4ZKpkoOXQtSLOvKg="; + sha256 = "0mpw2wzbpb60lnrsnw8mc88mxxhslpnc5nvkjyc3v2dbqs5cnmy5"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pushbullet/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pushbullet/default.nix index 43cab7db67..92338d9253 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pushbullet/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pushbullet/default.nix @@ -2,7 +2,7 @@ , buildPythonPackage , fetchPypi , requests -, websocket_client +, websocket-client , python_magic , cryptography , pytestCheckHook @@ -17,7 +17,7 @@ buildPythonPackage rec { sha256 = "917883e1af4a0c979ce46076b391e0243eb8fe0a81c086544bcfa10f53e5ae64"; }; - propagatedBuildInputs = [ cryptography requests websocket_client python_magic ]; + propagatedBuildInputs = [ cryptography requests websocket-client python_magic ]; preCheck = '' export PUSHBULLET_API_KEY="" diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pwntools/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pwntools/default.nix index b9f71de8e9..e6ee7d4f98 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pwntools/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pwntools/default.nix @@ -27,12 +27,12 @@ let debuggerName = lib.strings.getName debugger; in buildPythonPackage rec { - version = "4.5.0"; + version = "4.5.1"; pname = "pwntools"; src = fetchPypi { inherit pname version; - sha256 = "sha256-IWHMorSASG/po8ib1whS3xPuoUUlD0tbbWI35DI2SIY="; + sha256 = "97f945aed7ffa9d3e87f8759df83a5eac6dc2112907f35d0aee66a9bf62fd8eb"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/py-desmume/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/py-desmume/default.nix index a249b0aede..e9cff7eb82 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/py-desmume/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/py-desmume/default.nix @@ -1,6 +1,6 @@ { lib, buildPythonPackage, fetchFromGitHub, GitPython , libpcap, meson, ninja, pillow, pkg-config, pygobject3, SDL2 -, alsaLib, soundtouch, openal +, alsa-lib, soundtouch, openal }: let @@ -26,7 +26,7 @@ buildPythonPackage rec { cp -R --no-preserve=mode ${desmume} __build_desmume ''; - buildInputs = [ GitPython libpcap SDL2 alsaLib soundtouch openal ]; + buildInputs = [ GitPython libpcap SDL2 alsa-lib soundtouch openal ]; nativeBuildInputs = [ meson ninja pkg-config ]; propagatedBuildInputs = [ pillow pygobject3 ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/py-vapid/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/py-vapid/default.nix index dd8cbdcc5f..69dde8ca38 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/py-vapid/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/py-vapid/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "py-vapid"; - version = "1.8.0"; + version = "1.8.2"; src = fetchPypi { inherit pname version; - sha256 = "9e8de790cce397d9bc567a2148c3c5d88740f668342c59aaff9ed004f716a111"; + sha256 = "874f21910f2103c56228cded941d6e733dd8f1eb12876137919533bfacb65a48"; }; propagatedBuildInputs = [ cryptography ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/py3status/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/py3status/default.nix index 9967394d28..1471d7b173 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/py3status/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/py3status/default.nix @@ -14,7 +14,7 @@ , file , acpi , coreutils -, alsaUtils +, alsa-utils , i3 , procps , lm_sensors @@ -24,11 +24,11 @@ buildPythonPackage rec { pname = "py3status"; - version = "3.35"; + version = "3.37"; src = fetchPypi { inherit pname version; - sha256 = "1508fa481a2f1b55b9a9792f0480c7f54cad107c668ffc98a7c73622676e1c23"; + sha256 = "e05fe64df57de0f86e9b1aca907cd6f080d85909085e594868af488ce3557809"; }; doCheck = false; @@ -40,7 +40,7 @@ buildPythonPackage rec { sed -i -e "s|\[\"acpi\"|\[\"${acpi}/bin/acpi\"|" py3status/modules/battery_level.py sed -i -e "s|notify-send|${libnotify}/bin/notify-send|" py3status/modules/battery_level.py sed -i -e "s|/usr/bin/whoami|${coreutils}/bin/whoami|" py3status/modules/external_script.py - sed -i -e "s|'amixer|'${alsaUtils}/bin/amixer|" py3status/modules/volume_status.py + sed -i -e "s|'amixer|'${alsa-utils}/bin/amixer|" py3status/modules/volume_status.py sed -i -e "s|'i3-nagbar|'${i3}/bin/i3-nagbar|" py3status/modules/pomodoro.py sed -i -e "s|'free|'${procps}/bin/free|" py3status/modules/sysdata.py sed -i -e "s|'sensors|'${lm_sensors}/bin/sensors|" py3status/modules/sysdata.py diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyTelegramBotAPI/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyTelegramBotAPI/default.nix index 76e9954a02..b7432f26b2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyTelegramBotAPI/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyTelegramBotAPI/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pyTelegramBotAPI"; - version = "3.7.6"; + version = "3.7.9"; src = fetchPypi { inherit pname version; - sha256 = "859136cbd50e99922e1ea495d4ebe8235b2cb10fe419a5421f28855249db4278"; + sha256 = "7774314ff429852d423d5dfebe8fc1011dca93a028f1ccb0c56db6817245b752"; }; propagatedBuildInputs = [ requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/py_scrypt/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/py_scrypt/default.nix index b5ae4193f1..db26b16e27 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/py_scrypt/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/py_scrypt/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "scrypt"; - version = "0.8.17"; + version = "0.8.18"; src = fetchPypi { inherit pname version; - sha256 = "25b5075f2238be93af1cd574540a5ea01b8547f9b678aa72d22fce22577475ec"; + sha256 = "bcf04257af12e6d52974d177a7b08e314b66f350a73f9b6f7b232d69a6a1e041"; }; buildInputs = [ openssl ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyads/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyads/default.nix index 37d3b31a36..5b710b0da1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyads/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyads/default.nix @@ -1,25 +1,37 @@ -{ adslib, buildPythonPackage, fetchFromGitHub, lib, pytestCheckHook, pytest -, pytestcov, pythonOlder }: +{ lib +, adslib +, buildPythonPackage +, fetchFromGitHub +, pytestCheckHook +, pythonOlder +}: buildPythonPackage rec { pname = "pyads"; - version = "3.2.2"; - + version = "3.3.7"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "stlehmann"; repo = pname; rev = version; - sha256 = "1jd727pw0z73y4xhrykqkfcz1acrpy3rks58lr1y4yilfv11p6jb"; + sha256 = "sha256-h3c6z+dmrOc1Q7E8YVJZJD2FsxoxqQX5J92SEweIpto="; }; - buildInputs = [ adslib ]; + buildInputs = [ + adslib + ]; + patchPhase = '' substituteInPlace pyads/pyads_ex.py \ --replace "ctypes.CDLL(adslib)" "ctypes.CDLL(\"${adslib}/lib/adslib.so\")" ''; - checkInputs = [ pytestCheckHook pytest pytestcov ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "pyads" ]; meta = with lib; { description = "Python wrapper for TwinCAT ADS library"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyaehw4a1/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyaehw4a1/default.nix new file mode 100644 index 0000000000..0aa37cbae1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyaehw4a1/default.nix @@ -0,0 +1,31 @@ +{ lib +, buildPythonPackage +, isPy27 +, fetchFromGitHub +}: + +buildPythonPackage rec { + pname = "pyaehw4a1"; + version = "0.3.9"; + + disabled = isPy27; + + src = fetchFromGitHub { + owner = "bannhead"; + repo = "pyaehw4a1"; + rev = "v${version}"; + sha256 = "0grs7kiyhzlwqzmw2yxkkglnwjfpimgwxbgp0047rlp3k8md7sjv"; + }; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "pyaehw4a1" ]; + + meta = with lib; { + description = "Python interface for Hisense AEH-W4A1 module"; + homepage = "https://github.com/bannhead/pyaehw4a1"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyamg/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyamg/default.nix index f229ef5839..6ca3166fb1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyamg/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyamg/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "pyamg"; - version = "4.0.0"; + version = "4.1.0"; src = fetchPypi { inherit pname version; - sha256 = "3ceb38ffd86e29774e759486f2961599c8ed847459c68727493cadeaf115a38a"; + sha256 = "b4cacfcfd13379762a4551ac059a2e52a093b476ca1ad44b9202e736490a8863"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyarrow/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyarrow/default.nix index 3a375b8d28..989433b499 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyarrow/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyarrow/default.nix @@ -57,8 +57,8 @@ buildPythonPackage rec { meta = with lib; { description = "A cross-language development platform for in-memory data"; homepage = "https://arrow.apache.org/"; - license = lib.licenses.asl20; + license = licenses.asl20; platforms = platforms.unix; - maintainers = with lib.maintainers; [ veprbl ]; + maintainers = with maintainers; [ veprbl ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyatag/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyatag/default.nix new file mode 100644 index 0000000000..d2ed7d6ff3 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyatag/default.nix @@ -0,0 +1,39 @@ +{ lib +, buildPythonPackage +, isPy27 +, fetchFromGitHub +, aiohttp +}: + +buildPythonPackage rec { + pname = "pyatag"; + version = "0.3.5.3"; + + disabled = isPy27; + + src = fetchFromGitHub { + owner = "MatsNl"; + repo = "pyatag"; + rev = version; + sha256 = "00ly4injmgrj34p0lyx7cz2crgnfcijmzc0540gf7hpwha0marf6"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ + "pyatag" + "pyatag.discovery" + ]; + + meta = with lib; { + description = "Python module to talk to Atag One"; + homepage = "https://github.com/MatsNl/pyatag"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyathena/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyathena/default.nix new file mode 100644 index 0000000000..c7a8599a04 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyathena/default.nix @@ -0,0 +1,39 @@ +{ lib +, buildPythonPackage +, fetchPypi +, sqlalchemy +, boto3 +, botocore +, pandas +, tenacity +}: + +buildPythonPackage rec { + pname = "pyathena"; + version = "2.3.0"; + + src = fetchPypi { + pname = "PyAthena"; + inherit version; + sha256 = "08fl653yayvqi991zvcai5ifcxwy9ip6xh0cr3lbimggjnjgwsl5"; + }; + + # Nearly all tests depend on a working AWS Athena instance, + # therefore deactivating them. + # https://github.com/laughingman7743/PyAthena/#testing + doCheck = false; + + propagatedBuildInputs = [ + boto3 + botocore + pandas + tenacity + ]; + + meta = with lib; { + homepage = "https://github.com/laughingman7743/PyAthena/"; + license = licenses.mit; + description = "Python DB API 2.0 (PEP 249) client for Amazon Athena"; + maintainers = with maintainers; [ turion ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyatmo/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyatmo/default.nix index ea6e852217..8df35cb39b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyatmo/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyatmo/default.nix @@ -2,24 +2,27 @@ , buildPythonPackage , pythonOlder , fetchFromGitHub +, aiohttp , oauthlib , requests , requests_oauthlib , freezegun +, pytest-asyncio +, pytest-mock , pytestCheckHook , requests-mock }: buildPythonPackage rec { pname = "pyatmo"; - version = "4.2.3"; + version = "5.1.0"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "jabesq"; repo = "pyatmo"; rev = "v${version}"; - sha256 = "sha256-hbs+1x/pwv00dhm+1Yj1effddJZHDjs2K3oeBmdCY+k="; + sha256 = "0szk3wjcrllzvpix66iq3li54pw0c1knlx8wn1z9kqhkrb8r200x"; }; postPatch = '' @@ -29,6 +32,7 @@ buildPythonPackage rec { ''; propagatedBuildInputs = [ + aiohttp oauthlib requests requests_oauthlib @@ -36,6 +40,8 @@ buildPythonPackage rec { checkInputs = [ freezegun + pytest-asyncio + pytest-mock pytestCheckHook requests-mock ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyatv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyatv/default.nix index ddf2c9695a..cf7fd53d16 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyatv/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyatv/default.nix @@ -1,15 +1,16 @@ { lib , buildPythonPackage , aiohttp -, aiozeroconf +, audio-metadata +, bitarray , cryptography , deepdiff , fetchFromGitHub +, miniaudio , netifaces , protobuf , pytest-aiohttp , pytest-asyncio -, pytest-runner , pytest-timeout , pytestCheckHook , srptools @@ -18,21 +19,26 @@ buildPythonPackage rec { pname = "pyatv"; - version = "0.7.7"; + version = "0.8.0"; src = fetchFromGitHub { owner = "postlund"; repo = pname; rev = "v${version}"; - sha256 = "sha256-dPnh8XZN7ZVR2rYNnj7GSYXW5I2GNQwD/KRDTgs2AtI="; + sha256 = "1slr6l0gw0mf1zhp40bjf5bib45arw1cy4fqkg0gvdk1hx79828m"; }; - nativeBuildInputs = [ pytest-runner]; + postPatch = '' + substituteInPlace setup.py \ + --replace "pytest-runner" "" + ''; propagatedBuildInputs = [ aiohttp - aiozeroconf + audio-metadata + bitarray cryptography + miniaudio netifaces protobuf srptools diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pybids/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pybids/default.nix index 143f578b08..3ed34b4e73 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pybids/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pybids/default.nix @@ -14,12 +14,12 @@ }: buildPythonPackage rec { - version = "0.13"; + version = "0.13.1"; pname = "pybids"; src = fetchPypi { inherit pname version; - sha256 = "sha256-zVFaGAKgTP9UiUdmO4+Tut8Qc64xuGyB26cQLRHOqYw="; + sha256 = "sha256-ySDhVX4drotnFiXXDK+9woQ3uigistudpMJYenYl47o="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pybind11/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pybind11/default.nix index 3bd88368e7..2208cca708 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pybind11/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pybind11/default.nix @@ -3,12 +3,12 @@ , buildPythonPackage , fetchFromGitHub , fetchpatch -, python -, pytest , cmake +, eigen +, python , catch , numpy -, eigen +, pytest , scipy }: @@ -33,38 +33,41 @@ buildPythonPackage rec { nativeBuildInputs = [ cmake ]; - buildInputs = [ catch ]; + dontUseCmakeBuildDir = true; cmakeFlags = [ "-DEIGEN3_INCLUDE_DIR=${eigen}/include/eigen3" + "-DBUILD_TESTING=on" ] ++ lib.optionals (python.isPy3k && !stdenv.cc.isClang) [ - # Enable some tests only on Python 3. The "test_string_view" test - # 'testTypeError: string_view16_chars(): incompatible function arguments' - # fails on Python 2. - "-DPYBIND11_CPP_STANDARD=-std=c++17" + "-DPYBIND11_CXX_STANDARD=-std=c++17" ]; - dontUseSetuptoolsBuild = true; - dontUsePipInstall = true; - dontUseSetuptoolsCheck = true; + postBuild = '' + # build tests + make + ''; - preFixup = '' - pushd .. - export PYBIND11_USE_CMAKE=1 - setuptoolsBuildPhase - pipInstallPhase + postInstall = '' + make install # Symlink the CMake-installed headers to the location expected by setuptools mkdir -p $out/include/${python.libPrefix} ln -sf $out/include/pybind11 $out/include/${python.libPrefix}/pybind11 - popd ''; checkInputs = [ - pytest + catch numpy - scipy + pytest ]; + checkPhase = '' + runHook preCheck + + make check + + runHook postCheck + ''; + meta = with lib; { homepage = "https://github.com/pybind/pybind11"; description = "Seamless operability between C++11 and Python"; @@ -74,6 +77,6 @@ buildPythonPackage rec { bindings of existing C++ code. ''; license = licenses.bsd3; - maintainers = with maintainers;[ yuriaisaka ]; + maintainers = with maintainers; [ yuriaisaka dotlambda ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pybindgen/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pybindgen/default.nix index 496ae04876..18d688c3db 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pybindgen/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pybindgen/default.nix @@ -1,11 +1,11 @@ { lib, fetchPypi, buildPythonPackage, isPy3k, setuptools-scm, pygccxml }: buildPythonPackage rec { pname = "PyBindGen"; - version = "0.21.0"; + version = "0.22.0"; src = fetchPypi { inherit pname version; - sha256 = "4501aa3954fdac7bb4c049894f8aa1f0f4e1c1f50cc2303feef9bbe3aecfe364"; + sha256 = "5b4837d3138ac56863d93fe462f1dac39fb87bd50898e0da4c57fefd645437ac"; }; buildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pybotvac/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pybotvac/default.nix index ca093ba8e8..f115b2b5c6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pybotvac/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pybotvac/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "pybotvac"; - version = "0.0.20"; + version = "0.0.21"; src = fetchPypi { inherit pname version; - sha256 = "sha256-1NnTSO4vO3Ryt4vYD5ZTQGr241GqA2KsGRBVowSTCzM="; + sha256 = "1hf692w44dmalv7hlcpwzbnr6xhvnmdv5nl1jcy2jhiwp89lkhzv"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pybullet/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pybullet/default.nix index 195167b243..f2afba4d2d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pybullet/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pybullet/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "pybullet"; - version = "3.1.0"; + version = "3.1.7"; src = fetchPypi { inherit pname version; - sha256 = "ced62167216c75b58d5550adc74a0d328a166ded8b37b52ce90bc9736f597187"; + sha256 = "c343b90c4f3d529a0fbee8bec2b3e35d444f32e92d5ce974fe590544360fe310"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pycairo/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pycairo/default.nix index c8df65c2b7..587013e30f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pycairo/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pycairo/default.nix @@ -12,7 +12,7 @@ buildPythonPackage rec { pname = "pycairo"; - version = "1.20.0"; + version = "1.20.1"; disabled = pythonOlder "3.6"; @@ -22,7 +22,7 @@ buildPythonPackage rec { owner = "pygobject"; repo = "pycairo"; rev = "v${version}"; - sha256 = "0ifw4wjbml512w9kqj80y9gfqa7fkgfa1zkvi478k5krghjgk3lr"; + sha256 = "09aisph7ycgb4xi2xglvrn59i3cyqms8jbb876cl9763g7yqbcr6"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pychromecast/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pychromecast/default.nix index cc68d83d02..6c97b3e3f4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pychromecast/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pychromecast/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "PyChromecast"; - version = "9.1.2"; + version = "9.2.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-kHZWzqRtOdDpPsgVl5V470+29lX9i/TojmQh/NeCToU="; + sha256 = "6d34593575cf77565df47af4c75dd47c6a65831ec18a8c10b5367b2f1c172f0a"; }; disabled = !isPy3k; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pycoin/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pycoin/default.nix index d42cfcadfe..eb57096b98 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pycoin/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pycoin/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "pycoin"; - version = "0.90.20201031"; + version = "0.91.20210515"; src = fetchPypi { inherit pname version; - sha256 = "65c19204cb7aece4aae30c44b5e08beecb9c118370a9f9994d6cddaee17c351d"; + sha256 = "d2231a8d11b2524c26472d08cf1b76569849ab44507495d0510165ae0af4858e"; }; propagatedBuildInputs = [ setuptools ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pycontrol4/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pycontrol4/default.nix new file mode 100644 index 0000000000..93f7dcdc0a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pycontrol4/default.nix @@ -0,0 +1,43 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, aiohttp +, xmltodict +}: + +buildPythonPackage rec { + pname = "pycontrol4"; + version = "0.1.0"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "lawtancool"; + repo = "pyControl4"; + rev = "v${version}"; + sha256 = "0idw9kv6yxrbp0r33vb1jlzgil20m2rjjfrxhcwxmbjjqv93zn6d"; + }; + + propagatedBuildInputs = [ + aiohttp + xmltodict + ]; + + # tests access network + doCheck = false; + + pythonImportsCheck = [ + "pyControl4.account" + "pyControl4.alarm" + "pyControl4.director" + "pyControl4.light" + ]; + + meta = with lib; { + description = "Python 3 asyncio package for interacting with Control4 systems"; + homepage = "https://github.com/lawtancool/pyControl4"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pycoolmasternet-async/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pycoolmasternet-async/default.nix new file mode 100644 index 0000000000..45b40ddead --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pycoolmasternet-async/default.nix @@ -0,0 +1,31 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +}: + +buildPythonPackage rec { + pname = "pycoolmasternet-async"; + version = "0.1.2"; + + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "OnFreund"; + repo = "pycoolmasternet-async"; + rev = "v${version}"; + sha256 = "0qzdk18iqrvin8p8zrydf69d6pii3j47j11h7ymmsx08gh7c176g"; + }; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "pycoolmasternet_async" ]; + + meta = with lib; { + description = "Python library to control CoolMasterNet HVAC bridges over asyncio"; + homepage = "https://github.com/OnFreund/pycoolmasternet-async"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pycritty/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pycritty/default.nix new file mode 100644 index 0000000000..3e5f242902 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pycritty/default.nix @@ -0,0 +1,32 @@ +{ lib, buildPythonPackage, fetchPypi, pythonOlder, pyyaml }: + +buildPythonPackage rec { + pname = "pycritty"; + version = "0.3.5"; + disabled = pythonOlder "3.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "1lrmd4a1ps3h9z0pndfjfrd2qa7v3abd6np75fd2q2ffsqv7ar6x"; + }; + + postPatch = '' + # remove custom install + substituteInPlace setup.py \ + --replace "'install': PostInstallHook," "" + ''; + + propagatedBuildInputs = [ pyyaml ]; + + # The package does not include any tests to run + doCheck = false; + + pythonImportsCheck = [ "pycritty" ]; + + meta = with lib; { + description = "A CLI tool for changing your alacritty configuration on the fly"; + homepage = "https://github.com/antoniosarosi/pycritty"; + license = licenses.mit; + maintainers = with maintainers; [ jperras ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pydaikin/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pydaikin/default.nix index 209ef3dbc2..9b2eda85ab 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pydaikin/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pydaikin/default.nix @@ -12,14 +12,14 @@ buildPythonPackage rec { pname = "pydaikin"; - version = "2.4.1"; + version = "2.4.3"; disabled = pythonOlder "3.6"; src = fetchFromBitbucket { owner = "mustang51"; repo = pname; rev = "v${version}"; - sha256 = "1624adp4lqd1n9flnf0wqrcibml2nd19ga3fmxzjg4x5z6767bs3"; + sha256 = "0i013ma2fs6an3izak6zbs9lbr4l7b5x54d0xagw6gqf5n8dsclq"; }; propagatedBuildInputs = [ @@ -28,6 +28,10 @@ buildPythonPackage rec { urllib3 ]; + # while they have tests, they do not run them in their CI and they fail as of 2.4.3 + # AttributeError: 'DaikinBRP069' object has no attribute 'last_hour_cool_energy_consumption' + doCheck = false; + checkInputs = [ freezegun pytest-aiohttp diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pydantic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pydantic/default.nix index 11879159b4..69a080c1d7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pydantic/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pydantic/default.nix @@ -12,14 +12,14 @@ buildPythonPackage rec { pname = "pydantic"; - version = "1.8.1"; + version = "1.8.2"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "samuelcolvin"; repo = pname; rev = "v${version}"; - sha256 = "1zvcmx3927fgx37gdhi8g8igvrkri1v78rn3118p4wssqhgfwa6n"; + sha256 = "06162dss6mvi7wiy2lzxwvzajwxgy8b2fyym7qipaj7zibcqalq2"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pydes/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pydes/default.nix new file mode 100644 index 0000000000..78f131d424 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pydes/default.nix @@ -0,0 +1,24 @@ +{ lib, buildPythonPackage, fetchFromGitHub }: + +buildPythonPackage rec { + pname = "pydes"; + version = "unstable-2019-01-08"; + + src = fetchFromGitHub { + owner = "twhiteman"; + repo = "pyDes"; + rev = "e988a5ffc9abb8010fc75dba54904d1c5dbe83db"; + sha256 = "0sic8wbyk5azb4d4m6zbc96lfqcw8s2pzcv9nric5yqc751613ww"; + }; + + checkPhase = "python test_pydes.py"; + + pythonImportsCheck = [ "pyDes" ]; + + meta = with lib; { + description = "A pure python module which implements the DES and Triple-DES encryption algorithms"; + homepage = "https://github.com/twhiteman/pyDes"; + license = licenses.mit; + maintainers = with maintainers; [ j0hax ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pydroid-ipcam/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pydroid-ipcam/default.nix index ca171edde4..3d9b418817 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pydroid-ipcam/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pydroid-ipcam/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "pydroid-ipcam"; - version = "unstable-2021-04-16"; + version = "unstable-2021-06-01"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "home-assistant-libs"; repo = pname; - rev = "9f22682c6f9182aa5e42762f52223337b8b6909c"; - sha256 = "1lvppyzmwg0fp8zch11j51an4sb074yl9shzanakvjmbqpnif6s6"; + rev = "3ca14ff178f3506a6a91d8736deea8f06e9ad1c1"; + sha256 = "0w81pl5fya17hg5xgba2vgxnylfd8jc70il575wdz2pw6z6ihj3s"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pydsdl/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pydsdl/default.nix index 08029d35df..b1c6fab9f8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pydsdl/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pydsdl/default.nix @@ -2,14 +2,14 @@ buildPythonPackage rec { pname = "pydsdl"; - version = "1.9.4"; + version = "1.12.1"; disabled = pythonOlder "3.5"; # only python>=3.5 is supported src = fetchFromGitHub { owner = "UAVCAN"; repo = pname; rev = version; - sha256 = "1hmmc4sg6dckbx2ghcjpi74yprapa6lkxxzy0h446mvyngp0kwfv"; + sha256 = "sha256-5AwwqduIvLSZk6WcI59frwRKwjniQXfNWWVsy6V6I1E="; }; # allow for writable directory for darwin diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyezviz/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyezviz/default.nix index 14f2e55a1f..323b58e825 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyezviz/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyezviz/default.nix @@ -1,30 +1,37 @@ { lib , buildPythonPackage , fetchFromGitHub +, paho-mqtt , pandas +, pycryptodome , pythonOlder , requests +, xmltodict }: buildPythonPackage rec { pname = "pyezviz"; - version = "0.1.8.7"; + version = "0.1.8.9"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "baqs"; repo = "pyEzviz"; rev = version; - sha256 = "0k7wl9wf5i0yfdds6f9ma78ckz1p4h72z5s3qg0axzra62fvl9xg"; + sha256 = "sha256-ZjHDha7hSRXy86wm61bMMF8zMi5Lux6RbD0yFD/78J4="; }; propagatedBuildInputs = [ + paho-mqtt pandas + pycryptodome requests + xmltodict ]; # Project has no tests. test_cam_rtsp.py is more a sample for using the module doCheck = false; + pythonImportsCheck = [ "pyezviz" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyfakefs/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyfakefs/default.nix index cc7031db54..ab4c2f3607 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyfakefs/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyfakefs/default.nix @@ -7,13 +7,13 @@ }: buildPythonPackage rec { - version = "4.4.0"; + version = "4.5.0"; pname = "pyfakefs"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "082d863e0e2a74351f697da404e329a91e18e5055942e59d1b836e8459b2c94c"; + sha256 = "58b017b3437bbe97803a23755876c6d6aeb5aea37e52cec15e5d86b59c4c7295"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyfireservicerota/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyfireservicerota/default.nix new file mode 100644 index 0000000000..9d917a4801 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyfireservicerota/default.nix @@ -0,0 +1,37 @@ +{ lib +, buildPythonPackage +, fetchPypi +, pytz +, oauthlib +, requests +, websocket-client +}: + +buildPythonPackage rec { + pname = "pyfireservicerota"; + version = "0.0.40"; + + src = fetchPypi { + inherit pname version; + sha256 = "8d8173f6682ef2a61367660a15559c8c7a7e00db3f98092e0fa52e771df356f4"; + }; + + propagatedBuildInputs = [ + pytz + oauthlib + requests + websocket-client + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "pyfireservicerota" ]; + + meta = with lib; { + description = "Python 3 API wrapper for FireServiceRota/BrandweerRooster"; + homepage = "https://github.com/cyberjunky/python-fireservicerota"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyflic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyflic/default.nix new file mode 100644 index 0000000000..ead4b33929 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyflic/default.nix @@ -0,0 +1,30 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +}: + +buildPythonPackage rec { + pname = "pyflic"; + version = "2.0.3"; + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "soldag"; + repo = pname; + rev = version; + sha256 = "0adf4k191138jmbsfhkhhbgaxcq97d1hr5w48ryxr1fig64sjqy2"; + }; + + # Projec thas no tests + doCheck = false; + + pythonImportsCheck = [ "pyflic" ]; + + meta = with lib; { + description = "Python module to interact with Flic buttons"; + homepage = "https://github.com/soldag/pyflic"; + license = with licenses; [ cc0 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyflick/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyflick/default.nix new file mode 100644 index 0000000000..b1f39353c1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyflick/default.nix @@ -0,0 +1,40 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, aiohttp +, dateutil +}: + +buildPythonPackage rec { + pname = "pyflick"; + version = "0.0.2"; + + disabled = pythonOlder "3.6"; + + src = fetchPypi { + pname = "PyFlick"; + inherit version; + sha256 = "705c82d8caedfff19117c8859cc1b4f56e15ab8dbc0d64d63b79d8634007897f"; + }; + + propagatedBuildInputs = [ + aiohttp + dateutil + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ + "pyflick" + "pyflick.authentication" + ]; + + meta = with lib; { + description = "Python API For Flick Electric in New Zealand"; + homepage = "https://github.com/ZephireNZ/PyFlick"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyfma/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyfma/default.nix index 405098113a..d53c62e2f3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyfma/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyfma/default.nix @@ -10,13 +10,13 @@ buildPythonPackage rec { pname = "pyfma"; - version = "0.1.2"; + version = "0.1.4"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "3a9e2503fd01baa4978af5f491b79b7646d7872df9ecc7ab63ba10c250c50d8a"; + sha256 = "5bc6bf57d960a5232b7a56bd38e9fe3dce0911016746029931044b66bdec46e9"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pygccxml/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pygccxml/default.nix index 7d7bc459b6..f07340ce2f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pygccxml/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pygccxml/default.nix @@ -2,13 +2,13 @@ llvmPackages }: buildPythonPackage rec { pname = "pygccxml"; - version = "2.1.0"; + version = "2.2.1"; src = fetchFromGitHub { owner = "gccxml"; repo = "pygccxml"; rev = "v${version}"; - sha256 = "1vsxnfzz6qhiv8ac98qgk6w3s4j1jp661qy48gc9plcg2r952453"; + sha256 = "1msqpg3dqn7wjlf91ddljxzz01a3b1p2sy91n36lrsy87lz499gh"; }; buildInputs = [ castxml llvmPackages.libcxxStdenv]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pygit2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pygit2/default.nix index 46117d13f4..4d9538dbc3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pygit2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pygit2/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pygit2"; - version = "1.5.0"; + version = "1.6.0"; src = fetchPypi { inherit pname version; - sha256 = "9711367bd05f96ad6fc9c91d88fa96126ba2d1f1c3ea6f23c11402c243d66a20"; + sha256 = "7aacea4e57011777f4774421228e5d0ddb9a6ddb87ac4b542346d17ab12a4d62"; }; preConfigure = lib.optionalString stdenv.isDarwin '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pygti/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pygti/default.nix new file mode 100644 index 0000000000..62316b3d4d --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pygti/default.nix @@ -0,0 +1,51 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, setuptools-scm +, aiohttp +, pytz +, voluptuous +}: + +buildPythonPackage rec { + pname = "pygti"; + version = "0.9.2"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "vigonotion"; + repo = "pygti"; + rev = "v${version}"; + sha256 = "0zqa2krsniaqisjr0xqw009wdyy3y48zar9lrwysjsqci7k07d9x"; + }; + + nativeBuildInputs = [ + setuptools-scm + ]; + + SETUPTOOLS_SCM_PRETEND_VERSION = version; + + propagatedBuildInputs = [ + aiohttp + pytz + voluptuous + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ + "pygti.auth" + "pygti.exceptions" + "pygti.gti" + ]; + + meta = with lib; { + description = "Access public transport information in Hamburg, Germany"; + homepage = "https://github.com/vigonotion/pygti"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyheos/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyheos/default.nix new file mode 100644 index 0000000000..715c609875 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyheos/default.nix @@ -0,0 +1,37 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pytest-asyncio +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "pyheos"; + version = "0.7.2"; + + src = fetchFromGitHub { + owner = "andrewsayre"; + repo = "pyheos"; + rev = version; + sha256 = "0rgzg7lnqzzqrjp73c1hj1hq8p0j0msyih3yr4wa2rj81s8ihmby"; + }; + + checkInputs = [ + pytest-asyncio + pytestCheckHook + ]; + + disabledTests = [ + # accesses network + "test_connect_timeout" + ]; + + pythonImportsCheck = [ "pyheos" ]; + + meta = with lib; { + description = "Async python library for controlling HEOS devices through the HEOS CLI Protocol"; + homepage = "https://github.com/andrewsayre/pyheos"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyhiveapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyhiveapi/default.nix new file mode 100644 index 0000000000..f62d8bd130 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyhiveapi/default.nix @@ -0,0 +1,63 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, unasync +, boto3 +, botocore +, requests +, aiohttp +, pyquery +, loguru +}: + +buildPythonPackage rec { + pname = "pyhiveapi"; + version = "0.4.3"; + + format = "pyproject"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "Pyhass"; + repo = "Pyhiveapi"; + rev = "v${version}"; + sha256 = "sha256-SCMASYBOdq9nko5RSQ5BEbRLjOB4FlgwOKwdDggiOv8="; + }; + + postPatch = '' + substituteInPlace requirements.txt \ + --replace "pre-commit" "" + ''; + + nativeBuildInputs = [ + unasync + ]; + + propagatedBuildInputs = [ + boto3 + botocore + requests + aiohttp + pyquery + loguru + ]; + + # tests are not functional yet + doCheck = false; + + postBuild = '' + # pyhiveapi accesses $HOME upon importing + export HOME=$TMPDIR + ''; + + pythonImportsCheck = [ "pyhiveapi" ]; + + meta = with lib; { + description = "Python library to interface with the Hive API"; + homepage = "https://github.com/Pyhass/Pyhiveapi"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyhomematic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyhomematic/default.nix index 9bfa814894..2784719ff1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyhomematic/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyhomematic/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "pyhomematic"; - version = "0.1.72"; + version = "0.1.73"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "a1d44103b90418d9c8cde4699a1c671d57d12469be23a45e93bfc00df28ef11b"; + sha256 = "sha256-KaeheCIJgAqC68rgE71b1sSatSH25phGk662fnuOOsk="; }; checkPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyhomepilot/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyhomepilot/default.nix new file mode 100644 index 0000000000..12c395ff95 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyhomepilot/default.nix @@ -0,0 +1,35 @@ +{ lib +, aiohttp +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +}: + +buildPythonPackage rec { + pname = "pyhomepilot"; + version = "0.0.3"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "nico0302"; + repo = pname; + rev = "v${version}"; + sha256 = "00gmqx8cwsd15iccnlr8ypgqrdg6nw9ha518cfk7pyp8vhw1ziwy"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "pyhomepilot" ]; + + meta = with lib; { + description = "Python module to communicate with the Rademacher HomePilot API"; + homepage = "https://github.com/nico0302/pyhomepilot"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyialarm/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyialarm/default.nix index 977fbcd323..312ef8a996 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyialarm/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyialarm/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "pyialarm"; - version = "1.7"; + version = "1.9.0"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "RyuzakiKK"; repo = pname; rev = "v${version}"; - sha256 = "sha256-Gk5kWOqsPyq/0Vc+jdRRyj+ko3CpmqQ6/McvJYAGjLY="; + sha256 = "sha256-mvi8cd9uVFvG1Jc3OeuEwuLjbuMjPRrNRHFUVe3g/NM="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyicu/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyicu/default.nix index 1b01f1904e..45a2485115 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyicu/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyicu/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "PyICU"; - version = "2.7.3"; + version = "2.7.4"; src = fetchPypi { inherit pname version; - sha256 = "1jv1pds94agvn3zs33a8p8f0mk7f5pjwmczmg1s05ri5p0kzk4h8"; + sha256 = "c0655302e2aea16f9acefe04152f74e5d7d70542e9e15c89ee8d763c8e097f56"; }; nativeBuildInputs = [ icu68 ]; # for icu-config, but should be replaced with pkg-config diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyipma/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyipma/default.nix new file mode 100644 index 0000000000..b34c4838cb --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyipma/default.nix @@ -0,0 +1,36 @@ +{ lib +, aiohttp +, buildPythonPackage +, fetchPypi +, geopy +, pythonOlder +}: + +buildPythonPackage rec { + pname = "pyipma"; + version = "2.1.5"; + disabled = pythonOlder "3.7"; + + # Request for GitHub releases, https://github.com/dgomes/pyipma/issues/10 + src = fetchPypi { + inherit pname version; + sha256 = "0hq5dasqpsn64x2sf6a28hdmysygmcdq4in6s08w97jfvwc6xmym"; + }; + + propagatedBuildInputs = [ + aiohttp + geopy + ]; + + # Project has no tests included in the PyPI releases + doCheck = false; + + pythonImportsCheck = [ "pyipma" ]; + + meta = with lib; { + description = "Python library to retrieve information from Instituto Português do Mar e Atmosfera"; + homepage = "https://github.com/dgomes/pyipma"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyisy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyisy/default.nix new file mode 100644 index 0000000000..046cfdae9a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyisy/default.nix @@ -0,0 +1,43 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, requests +, python-dateutil +, aiohttp +}: + +buildPythonPackage rec { + pname = "pyisy"; + version = "3.0.0"; + + src = fetchFromGitHub { + owner = "automicus"; + repo = "PyISY"; + rev = "v${version}"; + sha256 = "1bxp13m83qm1n1ddyw6mdz0ijfksjg4ki85w4n8i597f3xazm8q4"; + }; + + postPatch = '' + substituteInPlace setup.py \ + --replace "setuptools-git-version" "" \ + --replace 'version_format="{tag}"' 'version="${version}"' + ''; + + propagatedBuildInputs = [ + aiohttp + python-dateutil + requests + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "pyisy" ]; + + meta = with lib; { + description = "Python module to talk to ISY994 from UDI"; + homepage = "https://github.com/automicus/PyISY"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pykdl/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pykdl/default.nix index 9a0431b2b8..0d7e82be63 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pykdl/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pykdl/default.nix @@ -1,24 +1,20 @@ -{ lib, stdenv, toPythonModule, fetchpatch, cmake, orocos-kdl, python, sip_4 }: +{ lib, stdenv, toPythonModule, cmake, orocos-kdl, eigen, python }: toPythonModule (stdenv.mkDerivation { pname = "pykdl"; inherit (orocos-kdl) version src; - patches = [ - # Fix build with SIP 4.19.23+. Can be removed with version 1.5. - # https://github.com/orocos/orocos_kinematics_dynamics/pull/270 - (fetchpatch { - url = "https://github.com/orocos/orocos_kinematics_dynamics/commit/d8d087ad0e1c41f3489d1a255ebfa27b5695196b.patch"; - sha256 = "0qyskqxv4a982kidzzyh34xj2iiw791ipbbl29jg4qb4l21xwqlg"; - stripLen = 1; - }) - ]; - sourceRoot = "source/python_orocos_kdl"; + # Fix hardcoded installation path + postPatch = '' + substituteInPlace CMakeLists.txt \ + --replace dist-packages site-packages + ''; + nativeBuildInputs = [ cmake ]; - buildInputs = [ orocos-kdl ]; - propagatedBuildInputs = [ python sip_4 ]; + buildInputs = [ orocos-kdl eigen ]; + propagatedBuildInputs = [ python ]; meta = with lib; { description = "Kinematics and Dynamics Library (Python bindings)"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pykrakenapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pykrakenapi/default.nix new file mode 100644 index 0000000000..e3620e7de6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pykrakenapi/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, krakenex +, pandas +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "pykrakenapi"; + version = "0.2.1"; + + src = fetchFromGitHub { + owner = "dominiktraxl"; + repo = "pykrakenapi"; + rev = "v${version}"; + sha256 = "0byqa4qk6a8ww1y822izpcfscv4frcfjysw6lx1pqyqjr23bfnbh"; + }; + + propagatedBuildInputs = [ + krakenex + pandas + ]; + + # tests require network connection + doCheck = false; + + pythonImportsCheck = [ "pykrakenapi" ]; + + meta = with lib; { + description = "Python implementation of the Kraken API"; + homepage = "https://github.com/dominiktraxl/pykrakenapi"; + license = licenses.lgpl3Plus; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pykulersky/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pykulersky/default.nix new file mode 100644 index 0000000000..1afa50c9be --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pykulersky/default.nix @@ -0,0 +1,43 @@ +{ lib +, bleak +, buildPythonPackage +, click +, fetchFromGitHub +, pytest-asyncio +, pytest-mock +, pytestCheckHook +, pythonOlder +}: + +buildPythonPackage rec { + pname = "pykulersky"; + version = "0.5.2"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "emlove"; + repo = pname; + rev = version; + sha256 = "1fzfixnl28rny7c3wr6gcdpqhyrz7z2aqq6qfwkxnkq2kqdbpmmg"; + }; + + propagatedBuildInputs = [ + bleak + click + ]; + + checkInputs = [ + pytest-asyncio + pytest-mock + pytestCheckHook + ]; + + pythonImportsCheck = [ "pykulersky" ]; + + meta = with lib; { + description = "Python module to control Brightech Kuler Sky Bluetooth LED devices"; + homepage = "https://github.com/emlove/pykulersky"; + license = with licenses; [ asl20 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyls-spyder/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyls-spyder/default.nix index aa83253ed2..4e0029783e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyls-spyder/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyls-spyder/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pyls-spyder"; - version = "0.3.2"; + version = "0.4.0"; src = fetchPypi { inherit pname version; - sha256 = "f2be1b05f2c7a72565b28de7289d2c2b16052b88e46914279a2d631e074ed158"; + sha256 = "45a321c83f64267d82907492c55199fccabda45bc872dd23bf1efd08edac1b0b"; }; propagatedBuildInputs = [ python-language-server ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pylutron-caseta/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pylutron-caseta/default.nix index 1066b95fd6..f71f2f4d52 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pylutron-caseta/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pylutron-caseta/default.nix @@ -11,14 +11,14 @@ buildPythonPackage rec { pname = "pylutron-caseta"; - version = "0.10.0"; + version = "0.11.0"; disabled = pythonOlder "3.5"; src = fetchFromGitHub { owner = "gurumitts"; repo = pname; rev = "v${version}"; - sha256 = "sha256-wKnca9sMdjvxxAW5YwLZFK/skmE6QMZG99HZRR3BIzw="; + sha256 = "sha256-2w8kRSZK9Bq3O6r6i0CJgxEXGo8KsWah9bMLlDNzMGk="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pymatgen/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pymatgen/default.nix index f6f2ebe621..d75af9158c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pymatgen/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pymatgen/default.nix @@ -21,11 +21,11 @@ buildPythonPackage rec { pname = "pymatgen"; - version = "2022.0.5"; + version = "2022.0.8"; src = fetchPypi { inherit pname version; - sha256 = "69c370ebd2ff9aceb15bb6efd364473609ffb23d2b2f02a3eb64fd537df69de0"; + sha256 = "4f12ac87657e8efe833087c575ec4430900dfcece890bb0486e07f034a2b34a0"; }; nativeBuildInputs = [ glibcLocales ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pymediainfo/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pymediainfo/default.nix index ac054bef95..50ea8c5cef 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pymediainfo/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pymediainfo/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "pymediainfo"; - version = "5.0.3"; + version = "5.1.0"; src = fetchPypi { inherit pname version; - sha256 = "ea61a3b0e0ed6de42ebb2233cf1a9312c57dce95101c025f9f081c10ecec48fb"; + sha256 = "d996c69d50081a24d6dca9679abf43ffd2be368b065f953c2c9082e5d649c734"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pymemcache/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pymemcache/default.nix index d0089e8edb..ab01259a77 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pymemcache/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pymemcache/default.nix @@ -8,13 +8,13 @@ buildPythonPackage rec { pname = "pymemcache"; - version = "3.4.0"; + version = "3.4.4"; src = fetchFromGitHub { owner = "pinterest"; repo = pname; rev = "v${version}"; - sha256 = "0xkw76y4059jg2a902wlpk6psyh2g4x6j6vlj9gzd5vqb7ihg2y7"; + sha256 = "1ajlhirxhd4pbzgd84k44znjazjbnbdfm3sk64avs0vgcgclq2n7"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pymeteoclimatic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pymeteoclimatic/default.nix new file mode 100644 index 0000000000..db150342a2 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pymeteoclimatic/default.nix @@ -0,0 +1,39 @@ +{ lib +, beautifulsoup4 +, buildPythonPackage +, fetchFromGitHub +, lxml +, pythonOlder +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "pymeteoclimatic"; + version = "0.0.6"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "adrianmo"; + repo = pname; + rev = version; + sha256 = "0ys0d6jy7416gbsd0pqgvm5ygzn36pjdaklqi4q56vsb13zn7y0h"; + }; + + propagatedBuildInputs = [ + beautifulsoup4 + lxml + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "meteoclimatic" ]; + + meta = with lib; { + description = "Python wrapper around the Meteoclimatic service"; + homepage = "https://github.com/adrianmo/pymeteoclimatic"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pymfy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pymfy/default.nix index 32483eea7b..ab5b21e888 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pymfy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pymfy/default.nix @@ -11,7 +11,7 @@ buildPythonPackage rec { pname = "pymfy"; - version = "0.9.4"; + version = "0.11.0"; format = "pyproject"; disabled = pythonOlder "3.7"; @@ -19,7 +19,7 @@ buildPythonPackage rec { owner = "tetienne"; repo = "somfy-open-api"; rev = "v${version}"; - sha256 = "1ml536dvva2xd52jfgrd557h2sr5w6567sxnyq0blhkgpyz4m2av"; + sha256 = "0wpjwjmywfyqgwvfa5kwcjpaljc32qa088kk88nl9nqdvc31mzhv"; }; nativeBuildInputs = [ poetry-core ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pymongo/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pymongo/default.nix index c5cfa00499..b81edaac66 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pymongo/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pymongo/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pymongo"; - version = "3.11.3"; + version = "3.11.4"; src = fetchPypi { inherit pname version; - sha256 = "db5098587f58fbf8582d9bda2462762b367207246d3e19623782fb449c3c5fcc"; + sha256 = "539d4cb1b16b57026999c53e5aab857fe706e70ae5310cc8c232479923f932e6"; }; # Tests call a running mongodb instance diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pynetdicom/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pynetdicom/default.nix index 278508fa37..bd27ff7fde 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pynetdicom/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pynetdicom/default.nix @@ -10,13 +10,13 @@ buildPythonPackage rec { pname = "pynetdicom"; - version = "1.5.6"; + version = "1.5.7"; src = fetchFromGitHub { owner = "pydicom"; repo = pname; rev = "v${version}"; - sha256 = "09v0bp9zgwbs4zwcncvfccrna5rnihkhs3l4qy0f1lq8gnzjg365"; + sha256 = "0wr6nh0xrhzwf05gnf3dwg5r3lhn9nfwch3l16zkbj6fli871brc"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pynobo/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pynobo/default.nix new file mode 100644 index 0000000000..52cada8278 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pynobo/default.nix @@ -0,0 +1,28 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +}: + +buildPythonPackage rec { + pname = "pynobo"; + version = "1.2.0"; + + src = fetchFromGitHub { + owner = "echoromeo"; + repo = pname; + rev = "v${version}"; + sha256 = "0f98qm9vp7f0hqaxhihv7y5swciyp60222la44f4936g0rvs005x"; + }; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "pynobo" ]; + + meta = with lib; { + description = "Python 3 TCP/IP interface for Nobo Hub/Nobo Energy Control devices"; + homepage = "https://github.com/echoromeo/pynobo"; + license = with licenses; [ gpl3Plus ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyobjc/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyobjc/default.nix index cd100d005d..6aa0d73304 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyobjc/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyobjc/default.nix @@ -2,7 +2,7 @@ buildPythonPackage rec { pname = "pyobjc"; - version = "7.1"; + version = "7.3"; # Gives "No matching distribution found for # pyobjc-framework-Collaboration==4.0b1 (from pyobjc==4.0b1)" @@ -10,7 +10,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "1dfce78545df1af25d1dcd710309dd243083d90c977a8c84c483f8254967417b"; + sha256 = "322b07420f91b2dd7f624823e53046b922cab4aad28baab01a62463728b7e0c5"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyopencl/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyopencl/default.nix index d983e2bc14..7650ba22b0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyopencl/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyopencl/default.nix @@ -21,7 +21,7 @@ let if stdenv.isDarwin then [ mesa_drivers.dev ] else [ ocl-icd ]; in buildPythonPackage rec { pname = "pyopencl"; - version = "2021.1.4"; + version = "2021.2.2"; checkInputs = [ pytest ]; buildInputs = [ opencl-headers pybind11 ] ++ os-specific-buildInputs; @@ -30,7 +30,7 @@ in buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "6a9665e89c15e1c684789263bd3a632567e7c7bd25a657092df4b185b3468971"; + sha256 = "50876f16624bc623fa2eff98a91259761b51471e186f535d4d4e7bce58292f0c"; }; # py.test is not needed during runtime, so remove it from `install_requires` diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pypca/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pypca/default.nix new file mode 100644 index 0000000000..86adb4e3e1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pypca/default.nix @@ -0,0 +1,35 @@ +{ lib +, buildPythonPackage +, colorlog +, fetchPypi +, pythonOlder +, pyserial +}: + +buildPythonPackage rec { + pname = "pypca"; + version = "0.0.13"; + disabled = pythonOlder "3.5"; + + src = fetchPypi { + inherit pname version; + sha256 = "0y0p2rm22x21mykipiv42fjc79b0969qsbhk3cqkrdnqwh5psbdl"; + }; + + propagatedBuildInputs = [ + colorlog + pyserial + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "pypca" ]; + + meta = with lib; { + description = "Python library for interacting with the PCA 301 smart plugs"; + homepage = "https://github.com/majuss/pypca"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pypdf3/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pypdf3/default.nix new file mode 100644 index 0000000000..4970c0d527 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pypdf3/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, fetchPypi +, glibcLocales +, python +, tqdm +}: + +buildPythonPackage rec { + pname = "pypdf3"; + version = "1.0.5"; + + src = fetchPypi { + pname = "PyPDF3"; + inherit version; + sha256 = "sha256-DGKpR4p3z8tw4gKi5Hmj09svysD3Hkn4NklhgROmEAU="; + }; + + LC_ALL = "en_US.UTF-8"; + buildInputs = [ glibcLocales ]; + + checkPhase = '' + ${python.interpreter} -m unittest tests/*.py + ''; + + propagatedBuildInputs = [ + tqdm + ]; + + meta = with lib; { + description = "A Pure-Python library built as a PDF toolkit"; + homepage = "https://github.com/sfneal/PyPDF3"; + license = licenses.bsd3; + maintainers = with maintainers; [ ambroisie ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pypinyin/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pypinyin/default.nix index 9615e07d7c..edefbf16ca 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pypinyin/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pypinyin/default.nix @@ -6,13 +6,13 @@ buildPythonPackage rec { pname = "pypinyin"; - version = "0.41.0"; + version = "0.42.0"; src = fetchFromGitHub { owner = "mozillazg"; repo = "python-pinyin"; rev = "v${version}"; - sha256 = "1s01dd5n6cgjg24dmji0abxkyvr1yi18lx4rpm9z54v0q3wkccg9"; + sha256 = "0i0ggizkgd809ylz74j1v5lfpyifz3wypj6f8l8fr5ad7a7r9s09"; }; postPatch = '' @@ -33,6 +33,6 @@ buildPythonPackage rec { homepage = "https://github.com/mozillazg/python-pinyin"; changelog = "https://github.com/mozillazg/python-pinyin/blob/master/CHANGELOG.rst"; license = licenses.mit; - maintainers = with maintainers; [ hexa mic92 ]; + maintainers = teams.tts.members; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyprind/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyprind/default.nix index 9c13a95357..082ebb2a49 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyprind/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyprind/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "PyPrind"; - version = "2.11.2"; + version = "2.11.3"; src = fetchPypi { inherit pname version; - sha256 = "0xg6m5hr33h9bdlrr42kc58jm2m87a9zsagy7n2m4n407d2snv64"; + sha256 = "e37dcab6e1a9c8e0a7f0fce65fde7a79e2deda1c75aa015910a49e2137b54cbf"; }; buildInputs = [ psutil ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyqt-builder/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyqt-builder/default.nix index d371fd7bce..d116ed275d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyqt-builder/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyqt-builder/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "pyqt-builder"; - version = "1.6.0"; + version = "1.10.1"; src = fetchPypi { pname = "PyQt-builder"; inherit version; - sha256 = "0g51yak53zzjs4gpq65i01cmpz7w8cjny9wfyxlgr2vi0wag107v"; + sha256 = "05vyckg4pq95s3b23drhd24sjwzic1k36nwckxz5jc83mixhqywn"; }; propagatedBuildInputs = [ packaging sip ]; @@ -21,5 +21,6 @@ buildPythonPackage rec { description = "PEP 517 compliant build system for PyQt"; homepage = "https://pypi.org/project/PyQt-builder/"; license = licenses.gpl3Only; + maintainers = with maintainers; [ eduardosm ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyqt/5.x.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyqt/5.x.nix index 2671b27a63..ae737ca2e6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyqt/5.x.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyqt/5.x.nix @@ -1,65 +1,52 @@ -{ lib, pythonPackages, pkg-config +{ lib +, buildPythonPackage +, isPy27 +, fetchPypi +, pkg-config , dbus -, qmake, lndir -, qtbase -, qtsvg -, qtdeclarative -, qtwebchannel -, withConnectivity ? false, qtconnectivity -, withMultimedia ? false, qtmultimedia -, withWebKit ? false, qtwebkit -, withWebSockets ? false, qtwebsockets +, lndir +, python +, dbus-python +, sip +, pyqt-builder +, libsForQt5 +, withConnectivity ? false +, withMultimedia ? false +, withWebKit ? false +, withWebSockets ? false }: let - - inherit (pythonPackages) buildPythonPackage python isPy3k dbus-python enum34; - - sip = if isPy3k then - pythonPackages.sip - else - (pythonPackages.sip_4.override { sip-module = "PyQt5.sip"; }).overridePythonAttrs(oldAttrs: { - # If we install sip in another folder, then we need to create a __init__.py as well - # if we want to be able to import it with Python 2. - # Python 3 could rely on it being an implicit namespace package, however, - # PyQt5 we made an explicit namespace package so sip should be as well. - postInstall = '' - cat << EOF > $out/${python.sitePackages}/PyQt5/__init__.py - from pkgutil import extend_path - __path__ = extend_path(__path__, __name__) - EOF - ''; - }); - pyqt5_sip = buildPythonPackage rec { pname = "PyQt5_sip"; - version = "12.8.1"; + version = "12.9.0"; - src = pythonPackages.fetchPypi { + src = fetchPypi { inherit pname version; - sha256 = "30e944db9abee9cc757aea16906d4198129558533eb7fadbe48c5da2bd18e0bd"; + sha256 = "0cmfxb7igahxy74qkq199l6zdxrr75bnxris42fww3ibgjflir6k"; }; # There is no test code and the check phase fails with: # > error: could not create 'PyQt5/sip.cpython-38-x86_64-linux-gnu.so': No such file or directory doCheck = false; }; - in buildPythonPackage rec { pname = "PyQt5"; - version = "5.15.2"; - format = "other"; + version = "5.15.4"; + format = "pyproject"; - src = pythonPackages.fetchPypi { + disabled = isPy27; + + src = fetchPypi { inherit pname version; - sha256 = "1z74295i69cha52llsqffzhb5zz7qnbjc64h8qg21l91jgf0harp"; + sha256 = "1gp5jz71nmg58zsm1h4vzhcphf36rbz37qgsfnzal76i1mz5js9a"; }; outputs = [ "out" "dev" ]; dontWrapQtApps = true; - nativeBuildInputs = [ + nativeBuildInputs = with libsForQt5; [ pkg-config qmake lndir @@ -75,11 +62,12 @@ in buildPythonPackage rec { ++ lib.optional withWebSockets qtwebsockets ; - buildInputs = [ + buildInputs = with libsForQt5; [ dbus qtbase qtsvg qtdeclarative + pyqt-builder ] ++ lib.optional withConnectivity qtconnectivity ++ lib.optional withWebKit qtwebkit @@ -88,10 +76,11 @@ in buildPythonPackage rec { propagatedBuildInputs = [ dbus-python - ] ++ (if isPy3k then [ pyqt5_sip ] else [ sip enum34 ]); + pyqt5_sip + ]; patches = [ - # Fix some wrong assumptions by ./configure.py + # Fix some wrong assumptions by ./project.py # TODO: figure out how to send this upstream ./pyqt5-fix-dbus-mainloop-support.patch ]; @@ -103,36 +92,7 @@ in buildPythonPackage rec { WebSocketsEnabled = withWebSockets; }; - configurePhase = '' - runHook preConfigure - - export PYTHONPATH=$PYTHONPATH:$out/${python.sitePackages} - - ${python.executable} configure.py -w \ - --confirm-license \ - --dbus-moduledir=$out/${python.sitePackages}/dbus/mainloop \ - --no-qml-plugin \ - --bindir=$out/bin \ - --destdir=$out/${python.sitePackages} \ - --stubsdir=$out/${python.sitePackages}/PyQt5 \ - --sipdir=$out/share/sip/PyQt5 \ - --designer-plugindir=$out/plugins/designer - - runHook postConfigure - ''; - - postInstall = lib.optionalString (!isPy3k) '' - ln -s ${sip}/${python.sitePackages}/PyQt5/sip.* $out/${python.sitePackages}/PyQt5/ - for i in $out/bin/*; do - wrapProgram $i --prefix PYTHONPATH : "$PYTHONPATH" - done - - # Let's make it a namespace package - cat << EOF > $out/${python.sitePackages}/PyQt5/__init__.py - from pkgutil import extend_path - __path__ = extend_path(__path__, __name__) - EOF - ''; + dontConfigure = true; # Checked using pythonImportsCheck doCheck = false; @@ -150,12 +110,10 @@ in buildPythonPackage rec { ++ lib.optional withConnectivity "PyQt5.QtConnectivity" ; - enableParallelBuilding = true; - meta = with lib; { description = "Python bindings for Qt5"; - homepage = "http://www.riverbankcomputing.co.uk"; - license = licenses.gpl3; + homepage = "https://riverbankcomputing.com/"; + license = licenses.gpl3Only; platforms = platforms.mesaPlatforms; maintainers = with maintainers; [ sander ]; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyqt/pyqt5-fix-dbus-mainloop-support.patch b/third_party/nixpkgs/pkgs/development/python-modules/pyqt/pyqt5-fix-dbus-mainloop-support.patch index faa36fa191..2f559dcfe6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyqt/pyqt5-fix-dbus-mainloop-support.patch +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyqt/pyqt5-fix-dbus-mainloop-support.patch @@ -21,7 +21,7 @@ so I have decided to solve this with an extra configure flag. 1 file changed, 11 insertions(+), 2 deletions(-) diff --git a/configure.py b/configure.py -index a3450ca3..440d90a2 100644 +index c6663e4..65e7da7 100644 --- a/configure.py +++ b/configure.py @@ -905,6 +905,9 @@ class TargetConfiguration: @@ -34,7 +34,7 @@ index a3450ca3..440d90a2 100644 if opts.pyuicinterpreter is not None: self.pyuic_interpreter = opts.pyuicinterpreter -@@ -1184,6 +1187,11 @@ def create_optparser(target_config): +@@ -1191,6 +1194,11 @@ def create_optparser(target_config): metavar="DIR", help="the directory containing the dbus/dbus-python.h header is " "DIR [default: supplied by pkg-config]") @@ -46,7 +46,7 @@ index a3450ca3..440d90a2 100644 p.add_option_group(g) # Installation. -@@ -2149,7 +2157,7 @@ def check_dbus(target_config, verbose): +@@ -2277,7 +2285,7 @@ def check_dbus(target_config, verbose): inform("Checking to see if the dbus support module should be built...") @@ -55,7 +55,7 @@ index a3450ca3..440d90a2 100644 if verbose: sys.stdout.write(cmd + "\n") -@@ -2178,7 +2186,8 @@ def check_dbus(target_config, verbose): +@@ -2307,7 +2315,8 @@ def check_dbus(target_config, verbose): inform("The Python dbus module doesn't seem to be installed.") return @@ -65,6 +65,16 @@ index a3450ca3..440d90a2 100644 # Try and find dbus-python.h. We don't use pkg-config because it is broken # for dbus-python (at least for versions up to and including v0.81.0). --- -2.18.0 - +diff --git a/project.py b/project.py +index fe9fbce..9ae1ca1 100644 +--- a/project.py ++++ b/project.py +@@ -261,7 +261,7 @@ del find_qt + dbus_lib_dirs = [] + dbus_libs = [] + +- args = ['pkg-config', '--cflags-only-I', '--libs dbus-1'] ++ args = ['pkg-config', '--cflags-only-I', '--libs dbus-1', 'dbus-python'] + + for line in self.read_command_pipe(args, fatal=False): + for flag in line.strip().split(): diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyqtgraph/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyqtgraph/default.nix index fbc4853ab6..fd2b9d4618 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyqtgraph/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyqtgraph/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "pyqtgraph"; - version = "0.11.1"; + version = "0.12.1"; src = fetchPypi { inherit pname version; - sha256 = "7d1417f36b5b92d1365671633a91711513e5afbcc82f32475d0690317607714e"; + sha256 = "d2ef3b5289184fb48dfe5f44ccb58d9d64ffb5452fc524a2bd7a640a36b3874d"; }; propagatedBuildInputs = [ numpy pyopengl pyqt5 scipy ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyqtwebengine/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyqtwebengine/default.nix index ce25bc04a1..f59694876c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyqtwebengine/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyqtwebengine/default.nix @@ -4,25 +4,23 @@ }: let - - inherit (pythonPackages) buildPythonPackage python isPy3k pyqt5 enum34; - inherit (pyqt5) sip; - # source: https://www.riverbankcomputing.com/pipermail/pyqt/2020-June/042985.html - patches = lib.optional (lib.hasPrefix "5.14" pyqt5.version) - [ ./fix-build-with-qt-514.patch ] - ; - + inherit (pythonPackages) buildPythonPackage python isPy27 pyqt5 enum34 sip pyqt-builder; in buildPythonPackage rec { pname = "PyQtWebEngine"; version = "5.15.4"; - format = "other"; + format = "pyproject"; + + disabled = isPy27; src = pythonPackages.fetchPypi { inherit pname version; sha256 = "06fc35hzg346a9c86dk7vzm1fakkgzn5l52jfq3bix3587sjip6f"; }; - inherit patches; + postPatch = '' + substituteInPlace pyproject.toml \ + --replace "[tool.sip.project]" "[tool.sip.project]''\nsip-include-dirs = [\"${pyqt5}/${python.sitePackages}/PyQt5/bindings\"]" + ''; outputs = [ "out" "dev" ]; @@ -33,6 +31,7 @@ in buildPythonPackage rec { qtbase qtsvg qtwebengine + pyqt-builder ]; buildInputs = [ @@ -42,49 +41,20 @@ in buildPythonPackage rec { qtwebengine ]; - propagatedBuildInputs = [ pyqt5 ] - ++ lib.optional (!isPy3k) enum34; + propagatedBuildInputs = [ pyqt5 ]; dontWrapQtApps = true; - configurePhase = '' - runHook preConfigure + # Avoid running qmake, which is in nativeBuildInputs + dontConfigure = true; - mkdir -p "$out/share/sip/PyQt5" + # Checked using pythonImportsCheck + doCheck = false; - # FIXME: Without --no-dist-info, I get - # unable to create /nix/store/yv4pzx3lxk3lscq0pw3hqzs7k4x76xsm-python3-3.7.2/lib/python3.7/site-packages/PyQtWebEngine-5.12.dist-info - ${python.executable} configure.py -w \ - --destdir="$out/${python.sitePackages}/PyQt5" \ - --no-dist-info \ - --apidir="$out/api/${python.libPrefix}" \ - --sipdir="$out/share/sip/PyQt5" \ - --pyqt-sipdir="${pyqt5}/share/sip/PyQt5" \ - --stubsdir="$out/${python.sitePackages}/PyQt5" - - runHook postConfigure - ''; - - postInstall = '' - # Let's make it a namespace package - cat << EOF > $out/${python.sitePackages}/PyQt5/__init__.py - from pkgutil import extend_path - __path__ = extend_path(__path__, __name__) - EOF - ''; - - installCheckPhase = let - modules = [ - "PyQt5.QtWebEngine" - "PyQt5.QtWebEngineWidgets" - ]; - imports = lib.concatMapStrings (module: "import ${module};") modules; - in '' - echo "Checking whether modules can be imported..." - PYTHONPATH=$PYTHONPATH:$out/${python.sitePackages} ${python.interpreter} -c "${imports}" - ''; - - doCheck = true; + pythonImportsCheck = [ + "PyQt5.QtWebEngine" + "PyQt5.QtWebEngineWidgets" + ]; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyramid/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyramid/default.nix index a26eff37ef..95333f746d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyramid/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyramid/default.nix @@ -18,11 +18,11 @@ buildPythonPackage rec { pname = "pyramid"; - version = "1.10.5"; + version = "1.10.8"; src = fetchPypi { inherit pname version; - sha256 = "fe1bd1140e6b79fe07f0053981d49be2dc66656cc8b481dd7ffcaa872fc25467"; + sha256 = "b7cd66595bef92f81764b976ddde2b2fa8e4f5f325e02f65f6ec7f3708b29cf6"; }; checkInputs = [ webtest zope_component ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyrituals/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyrituals/default.nix index f9f556dba5..d9c8759798 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyrituals/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyrituals/default.nix @@ -7,7 +7,7 @@ buildPythonPackage rec { pname = "pyrituals"; - version = "0.0.3"; + version = "0.0.4"; format = "pyproject"; disabled = pythonOlder "3.8"; @@ -15,7 +15,7 @@ buildPythonPackage rec { owner = "milanmeu"; repo = pname; rev = version; - sha256 = "sha256-oAxQRGP6GxiidnGshSJZEh2RD3XsZ/7kFGwcqaYaBnM="; + sha256 = "sha256-XJoSKGGwLoHMWxPGfXHeLg8VlIH1/j0ktzWe/pjd//0="; }; propagatedBuildInputs = [ aiohttp ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyro4/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyro4/default.nix index 626560d89b..3de7afd966 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyro4/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyro4/default.nix @@ -7,7 +7,6 @@ , cloudpickle , msgpack , isPy27 -, selectors34 , pytestCheckHook }: @@ -15,6 +14,8 @@ buildPythonPackage rec { pname = "Pyro4"; version = "4.80"; + disabled = isPy27; + src = fetchPypi { inherit pname version; sha256 = "46847ca703de3f483fbd0b2d22622f36eff03e6ef7ec7704d4ecaa3964cb2220"; @@ -22,7 +23,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ serpent - ] ++ lib.optionals isPy27 [ selectors34 ]; + ]; buildInputs = [ dill diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyrogram/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyrogram/default.nix new file mode 100644 index 0000000000..6710d3d286 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyrogram/default.nix @@ -0,0 +1,48 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, pyaes +, pysocks +, async-lru +, pytestCheckHook +, pytest-asyncio +}: + +buildPythonPackage rec { + pname = "pyrogram"; + version = "1.2.0"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "pyrogram"; + repo = "pyrogram"; + rev = "v${version}"; + sha256 = "0clbnhk1icr4vl29693r6r28f5by5n6pjxjqih21g3yd64q55q3q"; + }; + + propagatedBuildInputs = [ + pyaes + pysocks + async-lru + ]; + + checkInputs = [ + pytestCheckHook + pytest-asyncio + ]; + + pythonImportsCheck = [ + "pyrogram" + "pyrogram.errors" + "pyrogram.types" + ]; + + meta = with lib; { + description = "Telegram MTProto API Client Library and Framework for Python"; + homepage = "https://github.com/pyrogram/pyrogram"; + license = licenses.lgpl3Plus; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-core/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-core/default.nix index 4ee37e4bfe..b614371347 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-core/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-core/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-core"; - version = "0.6.1"; + version = "0.6.4"; src = fetchPypi { pname = "pyroute2.core"; inherit version; - sha256 = "04v10rzz844w2wfpy4pkh8fxn6dminjmfm1q7ngg5wvpk5r691rj"; + sha256 = "1kd5wda7nqcmrwy6b42nqgz570y99yjw3m6a1kxr8ag3859fwga5"; }; # pyroute2 sub-modules have no tests diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ethtool/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ethtool/default.nix index 4e671b4e19..812b71ef75 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ethtool/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ethtool/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-ethtool"; - version = "0.6.1"; + version = "0.6.4"; src = fetchPypi { pname = "pyroute2.ethtool"; inherit version; - sha256 = "1gd2vvdkjf6ppiql3znrlzc9xg8c4gsyg2jfm76c2xf329hi66n7"; + sha256 = "04wxx2nn3rdsjcmck7fidzfdc42gpsjva2jc8p7a987b0j58r17s"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ipdb/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ipdb/default.nix index 733988f20f..0e9c457698 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ipdb/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ipdb/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-ipdb"; - version = "0.6.1"; + version = "0.6.4"; src = fetchPypi { pname = "pyroute2.ipdb"; inherit version; - sha256 = "0wnzvy72pjipsdcfnwxpqp0jimg2l3w6gwd3r4b3mhvhackgsvs6"; + sha256 = "0r4xq7h39qac309lpl7haaa4rqf6qzsypkgnsiran3w9jgr1hg75"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ipset/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ipset/default.nix index 5ea6c7ce5d..34a99898e7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ipset/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ipset/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-ipset"; - version = "0.6.1"; + version = "0.6.4"; src = fetchPypi { pname = "pyroute2.ipset"; inherit version; - sha256 = "1d5l9f028y7fjfbxpp5wls9ffdgrln24dlz8k4p11b5n445liakx"; + sha256 = "sha256-V6aUGYv4PGhxHoEjgNuqoRbd6ftqirO/ofNDQEACTy8="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ndb/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ndb/default.nix index 7b34b3d341..4dcb654407 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ndb/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-ndb/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-ndb"; - version = "0.6.1"; + version = "0.6.4"; src = fetchPypi { pname = "pyroute2.ndb"; inherit version; - sha256 = "0lzvh0vva8i86h00add0b45s4f5dn6zbgysfvmzrxxasvda7fhlj"; + sha256 = "0q3py2n6w7nhdxi4l6vx8xpxh5if6hav4lcl5nwk8c4pgcrfd4vn"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-nftables/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-nftables/default.nix index 594d57cba1..9554dd8cbe 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-nftables/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-nftables/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-nftables"; - version = "0.6.1"; + version = "0.6.4"; src = fetchPypi { pname = "pyroute2.nftables"; inherit version; - sha256 = "0g93jsjf77sxjxmgmd8pzy8daxnqnzp2fk9gbh9kxk1n1958p100"; + sha256 = "0mj897h86ifk4ncms71nz6qrrfzfq8hd81198vf1hm41wppgyxn1"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-nslink/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-nslink/default.nix index e1076c1d0a..e5b6fae902 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-nslink/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-nslink/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-nslink"; - version = "0.6.1"; + version = "0.6.4"; src = fetchPypi { pname = "pyroute2.nslink"; inherit version; - sha256 = "0hjdi863imppirjrwr87xk2mfbw2djcsh7x94cq4xwps7bxmmkwk"; + sha256 = "0iz4vrv05x678ihhl2wdppxda82fxrq3d3sh7mka0pyb66a8mrik"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-protocols/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-protocols/default.nix index 389ca2ab44..bce291494a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-protocols/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2-protocols/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-protocols"; - version = "0.6.1"; + version = "0.6.4"; src = fetchPypi { pname = "pyroute2.protocols"; inherit version; - sha256 = "16c22ygyxdn1mhnd2f34q9b2mqa27klk6di91w27ycb3aczmadlm"; + sha256 = "0gb5r1msd14fhalfknhmg67l2hm802r4771i1srgl4rix1sk0yw8"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2/default.nix index f18bc12caa..b4e035e89c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyroute2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyroute2/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "pyroute2"; - version = "0.6.1"; + version = "0.6.4"; src = fetchPypi { inherit pname version; - sha256 = "sha256-nvG1PcuyQoZPrfMS4atsXsvpInjYt1bUIeX6Ol5DsO8="; + sha256 = "560b48a751b1150056ba553c89a31d563cc18ae2675b3793666adcaeb4fabfda"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyrsistent/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyrsistent/default.nix index 79f6666474..8a6eb47a46 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyrsistent/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyrsistent/default.nix @@ -3,9 +3,8 @@ , fetchPypi , isPy27 , six -, pytest_4 -, hypothesis_4 -, pytestrunner +, pytestCheckHook +, hypothesis }: buildPythonPackage rec { @@ -21,12 +20,16 @@ buildPythonPackage rec { propagatedBuildInputs = [ six ]; - checkInputs = [ pytestrunner pytest_4 hypothesis_4 ]; + checkInputs = [ pytestCheckHook hypothesis ]; postPatch = '' - substituteInPlace setup.py --replace 'pytest<5' 'pytest' + substituteInPlace setup.py \ + --replace 'pytest<5' 'pytest' \ + --replace 'hypothesis<5' 'hypothesis' ''; + pythonImportsCheck = [ "pyrsistent" ]; + meta = with lib; { homepage = "https://github.com/tobgu/pyrsistent/"; description = "Persistent/Functional/Immutable data structures"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysaml2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysaml2/default.nix index 1bb096dc0c..30fcfc52cb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pysaml2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysaml2/default.nix @@ -10,7 +10,7 @@ buildPythonPackage rec { pname = "pysaml2"; - version = "6.5.1"; + version = "6.5.2"; disabled = !isPy3k; @@ -19,7 +19,7 @@ buildPythonPackage rec { owner = "IdentityPython"; repo = pname; rev = "v${version}"; - sha256 = "1gh74csjk6af23agyigk4id79s4li1xnkmbpp73aqyvlly2kd0b7"; + sha256 = "1p0i88v2ng9fzs0fzjam1dc1idnihqc1wgagvnavqjrih721qcpi"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysbd/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysbd/default.nix index e1e0578c83..b85d1f6cd5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pysbd/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysbd/default.nix @@ -1,6 +1,6 @@ { lib , buildPythonPackage -, fetchPypi +, fetchFromGitHub , pythonOlder , tqdm , spacy @@ -8,12 +8,15 @@ buildPythonPackage rec { pname = "pysbd"; - version = "0.3.3"; + version = "0.3.4"; disabled = pythonOlder "3.5"; - src = fetchPypi { - inherit pname version; - sha256 = "56ab48a28a8470f0042a4cb7c9da8a6dde8621ecf87a86d75f201cbf1837e77f"; + # provides no sdist on pypi + src = fetchFromGitHub { + owner = "nipunsadvilkar"; + repo = "pySBD"; + rev = "v${version}"; + sha256 = "12p7qm237z56hw4zr03n8rycgfymhki2m9c4w3ib0mvqq122a5dp"; }; checkInputs = [ tqdm spacy ]; @@ -26,6 +29,6 @@ buildPythonPackage rec { description = "Pysbd (Python Sentence Boundary Disambiguation) is a rule-based sentence boundary detection that works out-of-the-box across many languages"; homepage = "https://github.com/nipunsadvilkar/pySBD"; license = licenses.mit; - maintainers = [ maintainers.mic92 ]; + maintainers = teams.tts.members; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysc2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysc2/default.nix index d02c85fb4f..9d0bef8e19 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pysc2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysc2/default.nix @@ -12,7 +12,7 @@ , pygame , s2clientprotocol , six -, websocket_client +, websocket-client , sc2-headless }: @@ -49,7 +49,7 @@ buildPythonPackage { pygame s2clientprotocol six - websocket_client + websocket-client sc2-headless ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyscard/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyscard/default.nix index 28c40e5ec5..fd31b15fdc 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyscard/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyscard/default.nix @@ -6,12 +6,12 @@ let in buildPythonPackage rec { - version = "2.0.0"; + version = "2.0.1"; pname = "pyscard"; src = fetchPypi { inherit pname version; - sha256 = "0yap0p8mp6dx58n3nina6ryhc2cysaj75sq98wf3qybf33cxjr5k"; + sha256 = "2ba5ed0db0ed3c98e95f9e34016aa3a57de1bc42dd9030b77a546036ee7e46d8"; }; postPatch = if withApplePCSC then '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyscf/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyscf/default.nix new file mode 100644 index 0000000000..0af38e3f8b --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyscf/default.nix @@ -0,0 +1,41 @@ +{ buildPythonPackage, lib, fetchFromGitHub, libcint, libxc, xcfun, blas +, numpy, scipy, h5py +}: + +buildPythonPackage rec { + pname = "pyscf"; + version = "1.7.6.post1"; + + src = fetchFromGitHub { + owner = "pyscf"; + repo = pname; + rev = "f6c9c6654dd9609c5e467a1edd5c2c076f793acc"; + sha256 = "0xbwkjxxysfpqz72qn6n4a0zr2h6sprbcal8j7kzymh7swjy117w"; + }; + + buildInputs = [ + libcint + libxc + xcfun + blas + ]; + + propagatedBuildInputs = [ + numpy + scipy + h5py + ]; + + PYSCF_INC_DIR="${libcint}:${libxc}:${xcfun}"; + + doCheck = false; + pythonImportsCheck = [ "pyscf" ]; + + meta = with lib; { + description = "Python-based simulations of chemistry framework"; + homepage = "https://github.com/pyscf/pyscf"; + license = licenses.asl20; + platforms = platforms.linux; + maintainers = [ maintainers.sheepforce ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysiaalarm/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysiaalarm/default.nix new file mode 100644 index 0000000000..206d24a40d --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysiaalarm/default.nix @@ -0,0 +1,54 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, dataclasses-json +, pycryptodome +, setuptools +, pytest-asyncio +, pytest-cases +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "pysiaalarm"; + version = "3.0.0"; + + disabled = pythonOlder "3.8"; + + src = fetchPypi { + inherit pname version; + sha256 = "b1c3a3d48d399bc91014167f59b23af601044d182db9267c23a9cf3559922122"; + }; + + postPatch = '' + substituteInPlace setup.cfg \ + --replace "==" ">=" + substituteInPlace pytest.ini \ + --replace "--cov pysiaalarm --cov-report term-missing" "" + ''; + + propagatedBuildInputs = [ + dataclasses-json + pycryptodome + setuptools + ]; + + checkInputs = [ + pytest-asyncio + pytest-cases + pytestCheckHook + ]; + + pythonImportsCheck = [ + "pysiaalarm" + "pysiaalarm.aio" + ]; + + meta = with lib; { + description = "Python package for creating a client that talks with SIA-based alarm systems"; + homepage = "https://github.com/eavanvalkenburg/pysiaalarm"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysigset/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysigset/default.nix index ccacb41292..43c8e81f5a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pysigset/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysigset/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pysigset"; - version = "0.3.2"; + version = "0.4.0"; src = fetchPypi { inherit pname version; - sha256 = "0ym44z3nwp8chfi7snmknkqnl2q9bghzv9p923r8w748i5hvyxx8"; + sha256 = "13ef98b058489ff572b6667c38970a544699895c0844cb3ac2494e3a59ac51e6"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysma/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysma/default.nix index 55b6b72784..8a6452fb66 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pysma/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysma/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "pysma"; - version = "0.4.3"; + version = "0.6.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-vriMnJFS7yfTyDT1f4sx1xEBTQjqc4ZHmkdHp1vcd+Q="; + sha256 = "8e997cf28c3ae7ccc90caa84aa3a3ed9245fac3e9cf76efb1467e4f4800143dc"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysmb/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysmb/default.nix index 1382dc7eff..ba4d7df48a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pysmb/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysmb/default.nix @@ -8,13 +8,13 @@ buildPythonPackage rec { pname = "pysmb"; - version = "1.2.6"; + version = "1.2.7"; src = fetchPypi { inherit pname version; format = "setuptools"; extension = "zip"; - sha256 = "f16e5e796b9dcc1d17ee76f87d53dd471f205fa19b4045eeda5bc7558a57d579"; + sha256 = "298605b8f467ce15b412caaf9af331c135e88fa2172333af14b1b2916361cb6b"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysml/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysml/default.nix new file mode 100644 index 0000000000..1f08eb1418 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysml/default.nix @@ -0,0 +1,37 @@ +{ lib +, async-timeout +, bitstring +, buildPythonPackage +, fetchFromGitHub +, pyserial-asyncio +}: + +buildPythonPackage rec { + pname = "pysml"; + version = "0.0.5"; + + src = fetchFromGitHub { + owner = "mtdcr"; + repo = pname; + rev = version; + sha256 = "05zgrk49b2y5jflxnjww2kqg1flynl3j4ifm0jr28nk0li5wg2bs"; + }; + + propagatedBuildInputs = [ + async-timeout + bitstring + pyserial-asyncio + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "sml" ]; + + meta = with lib; { + description = "Python library for EDL21 smart meters using Smart Message Language (SML)"; + homepage = "https://github.com/mtdcr/pysml"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysonos/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysonos/default.nix index cdd5291af9..63dbe76253 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pysonos/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysonos/default.nix @@ -14,7 +14,7 @@ buildPythonPackage rec { pname = "pysonos"; - version = "0.0.50"; + version = "0.0.51"; disabled = !isPy3k; @@ -23,7 +23,7 @@ buildPythonPackage rec { owner = "amelchio"; repo = pname; rev = "v${version}"; - sha256 = "sha256-iyFdT+RH2dtMtD+jSLFuAVE1DIQn6k9ONLOXNFhpuHs="; + sha256 = "sha256-MjsbqrH4SWnnwGe9BVHaValoQEiaaZVhFdn6MDoEyZs="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyspark/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyspark/default.nix index 064a8db88e..625041fd81 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyspark/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyspark/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pyspark"; - version = "3.1.1"; + version = "3.1.2"; src = fetchPypi { inherit pname version; - sha256 = "104abc146d4ffb72d4c683d25d7af5a6bf955d94590a76f542ee23185670aa7e"; + sha256 = "5e25ebb18756e9715f4d26848cc7e558035025da74b4fc325a0ebc05ff538e65"; }; # pypandoc is broken with pandoc2, so we just lose docs. diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyspice/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyspice/default.nix index 53fb7e6d24..0119c38099 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyspice/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyspice/default.nix @@ -15,12 +15,12 @@ buildPythonPackage rec { pname = "PySpice"; - version = "1.4.3"; + version = "1.5"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "0mnyy8nr06d1al99kniyqcm0p9a8dvkg719s42sajl8yf51sayc9"; + sha256 = "d28448accad98959e0f5932af8736e90a1f3f9ff965121c6881d24cdfca23d22"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyspnego/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyspnego/default.nix new file mode 100644 index 0000000000..2f8e775e34 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyspnego/default.nix @@ -0,0 +1,43 @@ +{ lib +, buildPythonPackage +, cryptography +, fetchFromGitHub +, pytest-mock +, pytestCheckHook +, pythonOlder +, glibcLocales +}: + +buildPythonPackage rec { + pname = "pyspnego"; + version = "0.1.6"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "jborean93"; + repo = pname; + rev = "v${version}"; + sha256 = "0pfh2x0539f0k2qi2pbjm64b2fqp64c63xxpinvg1yfaw915kgpb"; + }; + + propagatedBuildInputs = [ + cryptography + ]; + + checkInputs = [ + glibcLocales + pytest-mock + pytestCheckHook + ]; + + LC_ALL = "en_US.UTF-8"; + + pythonImportsCheck = [ "spnego" ]; + + meta = with lib; { + description = "Python SPNEGO authentication library"; + homepage = "Python SPNEGO authentication library"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysqlcipher3/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysqlcipher3/default.nix index ab3f949cf1..9c98664af1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pysqlcipher3/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysqlcipher3/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "pysqlcipher3"; - version = "1.0.3"; + version = "1.0.4"; disabled = pythonAtLeast "3.9"; src = fetchPypi { inherit pname version; - sha256 = "0c54m18h52llwkfc9zaag3qkmfzzp5a1w9jzsm5hd2nfdsxmnkk9"; + sha256 = "75d6b9d023d7ab76c841f97fd9d108d87516e281268e61518411d08cb7062663"; }; buildInputs = [ sqlcipher ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pystray/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pystray/default.nix index 45bc2a55e5..0bba9f9885 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pystray/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pystray/default.nix @@ -3,13 +3,13 @@ buildPythonPackage rec { pname = "pystray"; - version = "0.17.3"; + version = "0.17.4"; src = fetchFromGitHub { owner = "moses-palmer"; repo = "pystray"; rev = "v${version}"; - sha256 = "sha256-da2ZkehyXrxW5LdMR3K5AEQhiCpx8ygn6eswTC8fsRo="; + sha256 = "sha256-Rg2bbFTXLc1hXdShUmFxPcJtlcyWhspcjZtJYDSQ6vQ="; }; nativeBuildInputs = [ sphinx ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pysyncthru/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pysyncthru/default.nix new file mode 100644 index 0000000000..d3fed5dc4b --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pysyncthru/default.nix @@ -0,0 +1,42 @@ +{ lib +, isPy27 +, buildPythonPackage +, fetchPypi +, aiohttp +, demjson +, python +}: + +buildPythonPackage rec { + pname = "pysyncthru"; + version = "0.7.3"; + + disabled = isPy27; + + src = fetchPypi { + pname = "PySyncThru"; + inherit version; + sha256 = "13564018a7de4fe013e195e19d7bae92aa224e0f3a32373576682722d3dbee52"; + }; + + propagatedBuildInputs = [ + aiohttp + demjson + ]; + + checkPhase = '' + ${python.interpreter} -m unittest + ''; + + # no tests on PyPI, no tags on GitHub + doCheck = false; + + pythonImportsCheck = [ "pysyncthru" ]; + + meta = with lib; { + description = "Automated JSON API based communication with Samsung SyncThru Web Service"; + homepage = "https://github.com/nielstron/pysyncthru"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytenable/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytenable/default.nix index 39d1116f0b..2482e42309 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytenable/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytenable/default.nix @@ -17,13 +17,13 @@ buildPythonPackage rec { pname = "pytenable"; - version = "1.2.8"; + version = "1.3.0"; src = fetchFromGitHub { owner = "tenable"; repo = "pyTenable"; rev = version; - sha256 = "12x0w1c4blm73ixv07w90jkydl7d8dx5l27ih9vc1yv9v2zzb53k"; + sha256 = "sha256-APwBC1fL5JtYL5E/pabQpwGD1OtFMNPeWi/b9+hbhBE="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-ansible/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-ansible/default.nix index 10b9b0ec48..8285996170 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-ansible/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-ansible/default.nix @@ -8,13 +8,13 @@ buildPythonPackage rec { pname = "pytest-ansible"; - version = "2.2.3"; + version = "2.2.4"; src = fetchFromGitHub { owner = "ansible"; repo = "pytest-ansible"; rev = "v${version}"; - sha256 = "0vh2f34qxs8qfv15hf1q7li2iqjiydjsb4c86i2ma1b7vhi73j57"; + sha256 = "0vr015msciwzz20zplxalfmfx5hbg8rkf8vwjdg3z12fba8z8ks4"; }; patchPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-asyncio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-asyncio/default.nix index 0f37d09a9e..3ec6392f88 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-asyncio/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-asyncio/default.nix @@ -1,13 +1,13 @@ { lib, buildPythonPackage, fetchPypi, pytest, isPy3k, isPy35, async_generator }: buildPythonPackage rec { pname = "pytest-asyncio"; - version = "0.14.0"; + version = "0.15.1"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "9882c0c6b24429449f5f969a5158b528f39bde47dc32e85b9f0403965017e700"; + sha256 = "2564ceb9612bbd560d19ca4b41347b54e7835c2f792c504f698e05395ed63f6f"; }; buildInputs = [ pytest ] diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-cases/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-cases/default.nix index 2914b3cf9a..018ca0c46d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-cases/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-cases/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "pytest-cases"; - version = "3.4.6"; + version = "3.6.1"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "17w4s6622i97q81g15zamqm536ib00grgdfk2f4kk9bw2k7sdlq6"; + sha256 = "2009845554d3169dca99a7397d9904e5dbb58726c7417e8c308dda86f8966311"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-celery/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-celery/default.nix index 4b3999ec86..77de2d9698 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-celery/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-celery/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pytest-celery"; - version = "0.0.0a1"; + version = "0.0.0"; src = fetchPypi { inherit pname version; - sha256 = "0qifwi7q8dfwbzz2vm5m40lw23qh2fzibngbmw6qgwnkq8bhh3iy"; + sha256 = "cfd060fc32676afa1e4f51b2938f903f7f75d952186b8c6cf631628c4088f406"; }; patches = [ ./no-celery.patch ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-cov/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-cov/default.nix index a41c26b753..87f5972a74 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-cov/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-cov/default.nix @@ -1,17 +1,23 @@ -{ lib, buildPythonPackage, fetchPypi -, pytest, coverage }: +{ lib +, buildPythonPackage +, fetchPypi +, pytest +, coverage +, toml +}: buildPythonPackage rec { pname = "pytest-cov"; - version = "2.11.1"; + version = "2.12.1"; src = fetchPypi { inherit pname version; - sha256 = "359952d9d39b9f822d9d29324483e7ba04a3a17dd7d05aa6beb7ea01e359e5f7"; + sha256 = "1mzl06m8qcgsac1r2krixrkqdwq0nqk8asrpkcj2ddr7qawfw716"; }; buildInputs = [ pytest ]; - propagatedBuildInputs = [ coverage ]; + + propagatedBuildInputs = [ coverage toml ]; # xdist related tests fail with the following error # OSError: [Errno 13] Permission denied: 'py/_code' @@ -22,6 +28,8 @@ buildPythonPackage rec { py.test tests ''; + pythonImportsCheck = [ "pytest_cov" ]; + meta = with lib; { description = "Plugin for coverage reporting with support for both centralised and distributed testing, including subprocesses and multiprocessing"; homepage = "https://github.com/pytest-dev/pytest-cov"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-django/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-django/default.nix index c147996705..0253ed5a51 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-django/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-django/default.nix @@ -10,11 +10,11 @@ }: buildPythonPackage rec { pname = "pytest-django"; - version = "4.1.0"; + version = "4.4.0"; src = fetchPypi { inherit pname version; - sha256 = "26f02c16d36fd4c8672390deebe3413678d89f30720c16efb8b2a6bf63b9041f"; + sha256 = "b5171e3798bf7e3fc5ea7072fe87324db67a4dd9f1192b037fed4cc3c1b7f455"; }; nativeBuildInputs = [ pytest setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-helpers-namespace/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-helpers-namespace/default.nix index b405afea21..eac8cf6377 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-helpers-namespace/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-helpers-namespace/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "pytest-helpers-namespace"; - version = "2021.3.24"; + version = "2021.4.29"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "0pyj2d45zagmzlajzqdnkw5yz8k49pkihbydsqkzm413qnkzb38q"; + sha256 = "183524e3db4e2a1fea92e0ca3662a624ba44c9f3568da15679d7535ba6838a6a"; }; nativeBuildInputs = [ setuptools setuptools-declarative-requirements setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-mock/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-mock/default.nix index 5be8529433..a8127e276f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-mock/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-mock/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "pytest-mock"; - version = "3.5.1"; + version = "3.6.1"; src = fetchPypi { inherit pname version; - sha256 = "1z6r3n78bilfzkbxj083p0ib04ia1bhfgnj2qq9x6q4mmykapqm1"; + sha256 = "40217a058c52a63f1042f0784f62009e976ba824c418cced42e88d5f40ab0e62"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-order/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-order/default.nix index 2d94b26c53..a49c958c3f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-order/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-order/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "pytest-order"; - version = "0.10.0"; + version = "1.0.0"; src = fetchPypi { inherit pname version; - sha256 = "2da32cb95e63fac6972d34f5ddb53997fc66305355425be0f55f4092d666293d"; + sha256 = "sha256-WZeiYrMSNO67Rh+anvJGh79zICm0mYRaQ5i2nttawyE="; }; buildInputs = [ pytest ]; @@ -28,7 +28,7 @@ buildPythonPackage rec { meta = { description = "Pytest plugin that allows you to customize the order in which your tests are run"; - homepage = "https://github.com/mrbean-bremen/pytest-order"; + homepage = "https://github.com/pytest-dev/pytest-order"; license = lib.licenses.mit; maintainers = [ lib.maintainers.jacg ]; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-sanic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-sanic/default.nix index 81e189c22c..3cea788643 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-sanic/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-sanic/default.nix @@ -21,7 +21,9 @@ buildPythonPackage rec { sha256 = "sha256-OtyulpSHUWERtcIRT5j3YtHciIxFiIFYKqtlEd1NSFw="; }; - buildInputs = [ pytest ]; + buildInputs = [ + pytest + ]; propagatedBuildInputs = [ aiohttp @@ -36,6 +38,12 @@ buildPythonPackage rec { pytestCheckHook ]; + postPatch = '' + # https://github.com/yunstanford/pytest-sanic/issues/55 + substituteInPlace setup.py \ + --replace "websockets>=8.1,<9.0" "websockets>=9.1,<10.0" + ''; + disabledTests = [ # https://github.com/yunstanford/pytest-sanic/issues/51 "test_fixture_sanic_client_get" diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-snapshot/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-snapshot/default.nix index f38f395432..140994cbf2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-snapshot/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-snapshot/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pytest-snapshot"; - version = "0.5.0"; + version = "0.6.1"; src = fetchPypi { inherit pname version; - sha256 = "77d736073598a6224825eef8b8e0c760812a61410af2180cb070b27eb79f257d"; + sha256 = "ee8e9af118ff55ed13bf8e8b520714c52665ae44f6228563a600a08d62839b54"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-subprocess/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-subprocess/default.nix index aeacd084ee..83afef9292 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-subprocess/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-subprocess/default.nix @@ -10,7 +10,7 @@ buildPythonPackage rec { pname = "pytest-subprocess"; - version = "1.1.0"; + version = "1.1.1"; disabled = pythonOlder "3.6"; @@ -18,7 +18,7 @@ buildPythonPackage rec { owner = "aklajnert"; repo = "pytest-subprocess"; rev = version; - sha256 = "sha256-r6WNDdvZAHMG1kPtLJlCwvhbVG1gC1NEvRfta+Chxnk="; + sha256 = "sha256-o8wDZhNHGPV1BQ5Zi2kFNlWq5w0cqebaJUhUUwTK6So="; }; buildInputs = [ @@ -31,10 +31,6 @@ buildPythonPackage rec { pygments ]; - disabledTests = [ - "test_multiple_wait" # https://github.com/aklajnert/pytest-subprocess/issues/36 - ]; - meta = with lib; { description = "A plugin to fake subprocess for pytest"; homepage = "https://github.com/aklajnert/pytest-subprocess"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-subtests/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-subtests/default.nix index c07832c0b0..6b556abeaa 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-subtests/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-subtests/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "pytest-subtests"; - version = "0.4.0"; + version = "0.5.0"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "sha256-jZ4sHR3OEfe30snQkgLr/HdXt/8MrJtyrTKO3+fuA3s="; + sha256 = "5bd1e4bf0eda4c89a6cd42b0ee28e1d2ca0848de3fd67ad8cdd6d559ed00f120"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-testmon/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-testmon/default.nix index 7d2e07db01..fa63cc035a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-testmon/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-testmon/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "pytest-testmon"; - version = "1.1.0"; + version = "1.1.1"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-+IpT0o+Jg2UJcy6d7mEdZsYfW4IXIBu4IqBFbywyPRk="; + sha256 = "c8810f991545e352f646fb382e5962ff54b8aa52b09d62d35ae04f0d7a9c58d9"; }; propagatedBuildInputs = [ coverage ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest-xdist/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest-xdist/default.nix index f87169a630..e9b13177d9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest-xdist/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest-xdist/default.nix @@ -1,7 +1,7 @@ { lib , buildPythonPackage , fetchPypi -, isPy27 +, pythonOlder , setuptools-scm , pytestCheckHook , filelock @@ -13,12 +13,12 @@ buildPythonPackage rec { pname = "pytest-xdist"; - version = "2.2.1"; - disabled = isPy27; + version = "2.3.0"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "718887296892f92683f6a51f25a3ae584993b06f7076ce1e1fd482e59a8220a2"; + sha256 = "e8ecde2f85d88fbcadb7d28cb33da0fa29bca5cf7d5967fa89fc0e97e5299ea5"; }; nativeBuildInputs = [ setuptools-scm ]; @@ -39,7 +39,7 @@ buildPythonPackage rec { ]; meta = with lib; { - description = "py.test xdist plugin for distributed testing and loop-on-failing modes"; + description = "Pytest xdist plugin for distributed testing and loop-on-failing modes"; homepage = "https://github.com/pytest-dev/pytest-xdist"; license = licenses.mit; maintainers = with maintainers; [ dotlambda ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytest/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytest/default.nix index 07e4a44ccd..19289426d7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytest/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytest/default.nix @@ -19,12 +19,12 @@ buildPythonPackage rec { pname = "pytest"; - version = "6.2.3"; + version = "6.2.4"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "0d5nx7xqr9khagbvg6ac2cjjvcxrvvjp0chwim4z7w2ddsj3h4k7"; + sha256 = "50bcad0a0b9c5a72c8e4e7c9855a3ad496ca6a881a3641b4260605450772c54b"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytestrunner/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytestrunner/default.nix index 897efebf1d..d99f72299d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytestrunner/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytestrunner/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pytest-runner"; - version = "5.3.0"; + version = "5.3.1"; src = fetchPypi { inherit pname version; - sha256 = "ca3f58ff4957e8be6c54c55d575b235725cbbcf4dc0d5091c29c6444cfc8a5fe"; + sha256 = "0fce5b8dc68760f353979d99fdd6b3ad46330b6b1837e2077a89ebcf204aac91"; }; nativeBuildInputs = [ setuptools-scm pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-docx/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-docx/default.nix index 025a13958c..fd22adc377 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-docx/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-docx/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "python-docx"; - version = "0.8.10"; + version = "0.8.11"; src = fetchPypi { inherit pname version; - sha256 = "bc76ecac6b2d00ce6442a69d03a6f35c71cd72293cd8405a7472dfe317920024"; + sha256 = "1105d233a0956dd8dd1e710d20b159e2d72ac3c301041b95f4d4ceb3e0ebebc4"; }; checkInputs = [ behave mock pyparsing pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-dotenv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-dotenv/default.nix index 1d8a9a8545..6fbda114d3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-dotenv/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-dotenv/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "python-dotenv"; - version = "0.15.0"; + version = "0.17.1"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "587825ed60b1711daea4832cf37524dfd404325b7db5e25ebe88c495c9f807a0"; + sha256 = "b1ae5e9643d5ed987fc57cc2583021e38db531946518130777734f9589b3141f"; }; propagatedBuildInputs = [ click ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-ecobee-api/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-ecobee-api/default.nix new file mode 100644 index 0000000000..dc35c0c022 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-ecobee-api/default.nix @@ -0,0 +1,31 @@ +{ lib +, buildPythonPackage +, fetchPypi +, requests +}: + +buildPythonPackage rec { + pname = "python-ecobee-api"; + version = "0.2.13"; + + src = fetchPypi { + inherit pname version; + sha256 = "7c39f5aac854a2fb8fb33f41b351769a92ff784bc6112e7a5c1b9e1949a0fefe"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "pyecobee" ]; + + meta = with lib; { + description = "Python API for talking to Ecobee thermostats"; + homepage = "https://github.com/nkgilley/python-ecobee-api"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-engineio/3.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-engineio/3.nix deleted file mode 100644 index 5deeec0bb5..0000000000 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-engineio/3.nix +++ /dev/null @@ -1,69 +0,0 @@ -{ lib -, stdenv -, buildPythonPackage -, fetchFromGitHub -, aiohttp -, eventlet -, iana-etc -, libredirect -, mock -, requests -, six -, tornado -, websocket_client -, websockets -, pytestCheckHook -, pythonAtLeast -}: - -buildPythonPackage rec { - pname = "python-engineio"; - version = "3.14.2"; - - src = fetchFromGitHub { - owner = "miguelgrinberg"; - repo = "python-engineio"; - rev = "v${version}"; - sha256 = "1r3gvizrknbv036pvxid1l726wkb0l43bdaz5y879s7j3ipyb464"; - }; - - propagatedBuildInputs = [ - six - ]; - - checkInputs = [ - aiohttp - eventlet - mock - requests - tornado - websocket_client - websockets - pytestCheckHook - ]; - - preCheck = lib.optionalString stdenv.isLinux '' - echo "nameserver 127.0.0.1" > resolv.conf - export NIX_REDIRECTS=/etc/protocols=${iana-etc}/etc/protocols:/etc/resolv.conf=$(realpath resolv.conf) \ - LD_PRELOAD=${libredirect}/lib/libredirect.so - ''; - postCheck = '' - unset NIX_REDIRECTS LD_PRELOAD - ''; - - # somehow effective log level does not change? - disabledTests = [ "test_logger" ]; - pythonImportsCheck = [ "engineio" ]; - - meta = with lib; { - description = "Python based Engine.IO client and server v3.x"; - longDescription = '' - Engine.IO is a lightweight transport protocol that enables real-time - bidirectional event-based communication between clients and a server. - ''; - homepage = "https://github.com/miguelgrinberg/python-engineio/"; - license = with licenses; [ mit ]; - maintainers = with maintainers; [ graham33 ]; - broken = stdenv.isDarwin && (pythonAtLeast "3.9"); # See https://github.com/miguelgrinberg/python-socketio/issues/567 - }; -} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-engineio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-engineio/default.nix index ed03d96630..486484bca3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-engineio/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-engineio/default.nix @@ -9,7 +9,7 @@ , requests , six , tornado -, websocket_client +, websocket-client , websockets , pytestCheckHook }: @@ -31,7 +31,7 @@ buildPythonPackage rec { mock requests tornado - websocket_client + websocket-client websockets pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-ethtool/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-ethtool/default.nix new file mode 100644 index 0000000000..03c1473970 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-ethtool/default.nix @@ -0,0 +1,34 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pkg-config +, libnl +, nettools +}: + +buildPythonPackage rec { + pname = "python-ethtool"; + version = "0.14"; + + src = fetchFromGitHub { + owner = "fedora-python"; + repo = pname; + rev = "v${version}"; + sha256 = "sha256-Sp7ssfLZ/1FEKrvX257pKcaureZ5mdpJ7jCEh/ft1l0="; + }; + + postPatch = '' + substituteInPlace tests/parse_ifconfig.py --replace "Popen('ifconfig'," "Popen('${nettools}/bin/ifconfig'," + ''; + + buildInputs = [ libnl ]; + nativeBuildInputs = [ pkg-config ]; + pythonImportsCheck = [ "ethtool" ]; + + meta = with lib; { + description = "Python bindings for the ethtool kernel interface"; + homepage = "https://github.com/fedora-python/python-ethtool"; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ elohmeier ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-gitlab/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-gitlab/default.nix index b3cb9aaff6..34fbcff42f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-gitlab/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-gitlab/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "python-gitlab"; - version = "2.7.1"; + version = "2.8.0"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "0z4amj5xhx5zc3h2m0zrkardm3z5ba9qpjx5n6dczyz77r527yg1"; + sha256 = "f3364a8d1e813a0b3e68485db1e1881d8653b0e03b9a41f2c59544fce4930101"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-igraph/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-igraph/default.nix index 8e90ce5190..ce5073ed08 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-igraph/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-igraph/default.nix @@ -10,7 +10,7 @@ buildPythonPackage rec { pname = "python-igraph"; - version = "0.9.1"; + version = "0.9.6"; disabled = pythonOlder "3.6"; @@ -18,7 +18,7 @@ buildPythonPackage rec { owner = "igraph"; repo = "python-igraph"; rev = version; - sha256 = "1ldyzza25zvwh144lw8x856z76s8gfvnbdm56fcmwkvm7aj81npw"; + sha256 = "sha256-x/BUlMmSgjY2v6bVKPxmz86OCz6xgRUcfSqI3vV9MPs="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-izone/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-izone/default.nix new file mode 100644 index 0000000000..4bd1f988d4 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-izone/default.nix @@ -0,0 +1,44 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, aiohttp +, netifaces +, asynctest +, pytest-aiohttp +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "python-izone"; + version = "1.1.6"; + + disabled = pythonOlder "3.5"; + + src = fetchFromGitHub { + owner = "Swamp-Ig"; + repo = "pizone"; + rev = "v${version}"; + sha256 = "sha256-zgE1ccEPSa9nX0SEMN02VEGfnHexk/+jCJe7ugUL5UA="; + }; + + propagatedBuildInputs = [ + aiohttp + netifaces + ]; + + checkInputs = [ + asynctest + pytest-aiohttp + pytestCheckHook + ]; + + pythonImportsCheck = [ "pizone" ]; + + meta = with lib; { + description = "A python interface to the iZone airconditioner controller"; + homepage = "https://github.com/Swamp-Ig/pizone"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-juicenet/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-juicenet/default.nix new file mode 100644 index 0000000000..1547c89146 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-juicenet/default.nix @@ -0,0 +1,33 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, aiohttp +}: + +buildPythonPackage rec { + pname = "python-juicenet"; + version = "1.0.2"; + + src = fetchFromGitHub { + owner = "jesserockz"; + repo = "python-juicenet"; + rev = "v${version}"; + sha256 = "04547pj51ds31yhyc7ng47v9giz16h2s3wgb6szc8ivhb5rclqz2"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "pyjuicenet" ]; + + meta = with lib; { + description = "Read and control Juicenet/Juicepoint/Juicebox based EVSE devices"; + homepage = "https://github.com/jesserockz/python-juicenet"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-linux-procfs/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-linux-procfs/default.nix new file mode 100644 index 0000000000..702be64075 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-linux-procfs/default.nix @@ -0,0 +1,25 @@ +{ lib, buildPythonPackage, fetchgit, six }: + +buildPythonPackage rec { + pname = "python-linux-procfs"; + version = "0.6.3"; + + src = fetchgit { + url = "https://git.kernel.org/pub/scm/libs/python/${pname}/${pname}.git"; + rev = "v${version}"; + sha256 = "sha256-PPgMlL9oj4HYUsr444ZrGo1LSZBl9hL5SE98IASUpbc="; + }; + + propagatedBuildInputs = [ six ]; + + # contains no tests + doCheck = false; + pythonImportsCheck = [ "procfs" ]; + + meta = with lib; { + description = "Python classes to extract information from the Linux kernel /proc files"; + homepage = "https://git.kernel.org/pub/scm/libs/python/python-linux-procfs/python-linux-procfs.git/"; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ elohmeier ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-louvain/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-louvain/default.nix new file mode 100644 index 0000000000..6d22c1fd84 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-louvain/default.nix @@ -0,0 +1,26 @@ +{ lib +, fetchPypi +, buildPythonPackage +, networkx +, numpy }: + +buildPythonPackage rec { + pname = "python-louvain"; + version = "0.15"; + + src = fetchPypi { + inherit pname version; + sha256 = "sha256-KoVu374plSpgpVOKhLt4zKGPaISoi5Ml6FoRyN1JF+s="; + }; + + propagatedBuildInputs = [ networkx numpy ]; + + pythonImportsCheck = [ "community" ]; + + meta = with lib; { + homepage = "https://github.com/taynaud/python-louvain"; + description = "Louvain Community Detection"; + license = licenses.bsd3; + maintainers = with maintainers; [ erictapen ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-miio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-miio/default.nix index 2374c6797f..b441971d44 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-miio/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-miio/default.nix @@ -35,6 +35,7 @@ buildPythonPackage rec { postPatch = '' substituteInPlace pyproject.toml \ + --replace 'click = "^7"' 'click = "*"' \ --replace 'croniter = "^0"' 'croniter = "*"' \ --replace 'defusedxml = "^0.6"' 'defusedxml = "*"' ''; @@ -44,24 +45,24 @@ buildPythonPackage rec { ]; propagatedBuildInputs = [ - click - cryptography - construct - zeroconf - attrs - pytz - appdirs - tqdm - netifaces android-backup + appdirs + attrs + click + construct croniter + cryptography defusedxml + netifaces + pytz + pyyaml + tqdm + zeroconf ] ++ lib.optional (pythonOlder "3.8") importlib-metadata; checkInputs = [ pytestCheckHook pytest-mock - pyyaml ]; pythonImportsCheck = [ "miio" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-mpv-jsonipc/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-mpv-jsonipc/default.nix index 82ee7e2092..8c43d7a4ca 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-mpv-jsonipc/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-mpv-jsonipc/default.nix @@ -1,5 +1,5 @@ { lib, buildPythonPackage, fetchFromGitHub, requests -, tqdm, websocket_client, pythonOlder }: +, tqdm, websocket-client, pythonOlder }: buildPythonPackage rec { pname = "python-mpv-jsonipc"; @@ -16,7 +16,7 @@ buildPythonPackage rec { # 'mpv-jsonipc' does not have any tests doCheck = false; - propagatedBuildInputs = [ requests tqdm websocket_client ]; + propagatedBuildInputs = [ requests tqdm websocket-client ]; pythonImportsCheck = [ "python_mpv_jsonipc" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-redis-lock/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-redis-lock/default.nix index 49113dfad5..bd8933be82 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-redis-lock/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-redis-lock/default.nix @@ -1,4 +1,5 @@ { lib +, stdenv , buildPythonPackage , fetchPypi , redis @@ -30,6 +31,10 @@ buildPythonPackage rec { disabledTests = [ # https://github.com/ionelmc/python-redis-lock/issues/86 "test_no_overlap2" + ] ++ lib.optionals stdenv.isDarwin [ + # fail on Darwin because it defaults to multiprocessing `spawn` + "test_reset_signalizes" + "test_reset_all_signalizes" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-rtmidi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-rtmidi/default.nix index aadf75d59f..335a085277 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-rtmidi/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-rtmidi/default.nix @@ -1,19 +1,19 @@ { lib, buildPythonPackage, fetchPypi, isPy27 -, pkg-config, alsaLib, libjack2, tox, flake8, alabaster +, pkg-config, alsa-lib, libjack2, tox, flake8, alabaster }: buildPythonPackage rec { pname = "python-rtmidi"; - version = "1.4.7"; + version = "1.4.9"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "d7dbc2b174b09015dfbee449a672a072aa72b367be40b13e04ee35a2e2e399e3"; + sha256 = "bfeb4ed99d0cccf6fa2837566907652ded7adc1c03b69f2160c9de4082301302"; }; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib libjack2 ]; + buildInputs = [ alsa-lib libjack2 ]; checkInputs = [ tox flake8 diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-smarttub/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-smarttub/default.nix index 380b173896..0d7a15aec9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-smarttub/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-smarttub/default.nix @@ -13,14 +13,14 @@ buildPythonPackage rec { pname = "python-smarttub"; - version = "0.0.24"; + version = "0.0.25"; disabled = pythonOlder "3.8"; src = fetchFromGitHub { owner = "mdz"; repo = pname; rev = "v${version}"; - sha256 = "sha256-XWZbfPNZ1cPsDwtJRuOwIPTHmNBMzFSYHDDcbBrXjtk="; + sha256 = "13yf75vmn15g2hrbiv78mws96qbk40p5pz7vc6ljyp41y2lc9wpm"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-socketio/4.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-socketio/4.nix deleted file mode 100644 index 3a6f5d87fd..0000000000 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-socketio/4.nix +++ /dev/null @@ -1,47 +0,0 @@ -{ lib -, bidict -, buildPythonPackage -, fetchFromGitHub -, mock -, pytestCheckHook -, python-engineio_3 -}: - -buildPythonPackage rec { - pname = "python-socketio"; - version = "4.6.1"; - - src = fetchFromGitHub { - owner = "miguelgrinberg"; - repo = "python-socketio"; - rev = "v${version}"; - sha256 = "14dijag17v84v0pp9qi89h5awb4h4i9rj0ppkixqv6is9z9lflw5"; - }; - - propagatedBuildInputs = [ - bidict - python-engineio_3 - ]; - - checkInputs = [ - mock - pytestCheckHook - ]; - - pythonImportsCheck = [ "socketio" ]; - - # pytestCheckHook seems to change the default log level to WARNING, but the - # tests assert it is ERROR - disabledTests = [ "test_logger" ]; - - meta = with lib; { - description = "Python Socket.IO server and client 4.x"; - longDescription = '' - Socket.IO is a lightweight transport protocol that enables real-time - bidirectional event-based communication between clients and a server. - ''; - homepage = "https://github.com/miguelgrinberg/python-socketio/"; - license = with licenses; [ mit ]; - maintainers = with maintainers; [ graham33 ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-sql/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-sql/default.nix index 90dc5835e4..a07941e5de 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-sql/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-sql/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "python-sql"; - version = "1.2.1"; + version = "1.2.2"; src = fetchPypi { inherit pname version; - sha256 = "306999bd311fbf50804d76f346655af0a6ff18881ce46c1329256fee40f492c0"; + sha256 = "2d916357a0172c35eccac29064cd18cd41616fc60109a37dac0e9d11a0b1183a"; }; meta = { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-telegram-bot/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-telegram-bot/default.nix index 7fc92a2236..4d223c5483 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-telegram-bot/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-telegram-bot/default.nix @@ -1,27 +1,29 @@ { lib , APScheduler , buildPythonPackage +, cachetools , certifi , decorator , fetchPypi , future -, isPy3k , tornado , urllib3 +, pythonOlder }: buildPythonPackage rec { pname = "python-telegram-bot"; - version = "13.5"; - disabled = !isPy3k; + version = "13.6"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-g9v0zUYyf9gYu2ZV8lCAJKCt5o69s1RNo1xGmtwjvds="; + sha256 = "37cfe8faba16fb68a8b5ab41a10e787c385f6296200c84256cc54d7c16334643"; }; propagatedBuildInputs = [ APScheduler + cachetools certifi decorator future diff --git a/third_party/nixpkgs/pkgs/development/python-modules/python-velbus/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/python-velbus/default.nix index a02edfdc1f..c83ff853f1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/python-velbus/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/python-velbus/default.nix @@ -6,19 +6,22 @@ buildPythonPackage rec { pname = "python-velbus"; - version = "2.1.2"; + version = "2.1.4"; src = fetchFromGitHub { owner = "thomasdelaet"; repo = pname; - rev = "v${version}"; - sha256 = "0dv7dsjp5li87ispdphaz7jd0a9xc328rxwawf2f58b1ii904xr4"; + rev = version; + sha256 = "1z0a7fc9xfrcpwi9xiimxsgbzbp2iwyi1rij6vqd5z47mzi49fv9"; }; - propagatedBuildInputs = [ pyserial ]; + propagatedBuildInputs = [ + pyserial + ]; # Project has not tests doCheck = false; + pythonImportsCheck = [ "velbus" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pythonegardia/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pythonegardia/default.nix index 4c2394421f..318059d246 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pythonegardia/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pythonegardia/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "pythonegardia"; - version = "1.0.40"; + version = "1.0.51"; src = fetchPypi { inherit pname version; - sha256 = "1rv6m5zaflf3nanpl1xmfmfcpg8kzcnmniq1hhgrybsspkc7mvry"; + sha256 = "b99217e34c59bfae059db400acef99d3d32237d13da6fdce9e0d4decc9a07e61"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytibber/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytibber/default.nix new file mode 100644 index 0000000000..c6bf0e4aef --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytibber/default.nix @@ -0,0 +1,51 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, aiohttp +, async-timeout +, graphql-subscription-manager +, python-dateutil +, pytz +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "pytibber"; + version = "0.18.0"; + + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "Danielhiversen"; + repo = "pyTibber"; + rev = version; + sha256 = "sha256-612BBDgVcdpOsEl2Hc+oCDFmSPGjHvfmVr7i7zdfB/o="; + }; + + propagatedBuildInputs = [ + aiohttp + async-timeout + graphql-subscription-manager + python-dateutil + pytz + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pytestFlagsArray = [ "test/test.py" ]; + + # tests access network + doCheck = false; + + pythonImportsCheck = [ "tibber" ]; + + meta = with lib; { + description = "A python3 library to communicate with Tibber"; + homepage = "https://github.com/Danielhiversen/pyTibber"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytile/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytile/default.nix index c1901a7508..0d269522e1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytile/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytile/default.nix @@ -14,7 +14,6 @@ buildPythonPackage rec { pname = "pytile"; version = "5.2.1"; - disabled = pythonAtLeast "3.9"; src = fetchFromGitHub { owner = "bachya"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytools/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytools/default.nix index 83de3cb459..79fff88757 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytools/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytools/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "pytools"; - version = "2021.2.1"; + version = "2021.2.7"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "ebbcc38c7a30b1a0ce1a74816c85db9f2556bb4d5b9a71f85f5d88f69ddcb96b"; + sha256 = "0538f6fe7f00bf765ca5ab38518db48df72de818460006e54b0575accd24d9fb"; }; checkInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytorch-metric-learning/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytorch-metric-learning/default.nix index e340d5eefa..0c1ca751eb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytorch-metric-learning/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytorch-metric-learning/default.nix @@ -12,7 +12,7 @@ buildPythonPackage rec { pname = "pytorch-metric-learning"; - version = "0.9.97"; + version = "0.9.99"; disabled = isPy27; @@ -20,7 +20,7 @@ buildPythonPackage rec { owner = "KevinMusgrave"; repo = pname; rev = "v${version}"; - sha256 = "1hipby54swwpfw50wlxzgbphzqkk1fbs5x44smz4rrngqpsp3g67"; + sha256 = "1ahs2b7q3hxi6yv4g2fjy7mvl899h56dvlpc2r9301440qsgkdzr"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytorch/bin.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytorch/bin.nix index 41af9502c0..288af6f7ef 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytorch/bin.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytorch/bin.nix @@ -18,7 +18,7 @@ let pyVerNoDot = builtins.replaceStrings [ "." ] [ "" ] python.pythonVersion; srcs = import ./binary-hashes.nix version; unsupported = throw "Unsupported system"; - version = "1.8.1"; + version = "1.9.0"; in buildPythonPackage { inherit version; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytorch/binary-hashes.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytorch/binary-hashes.nix index 4855d13571..d6fbde19f0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytorch/binary-hashes.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytorch/binary-hashes.nix @@ -2,16 +2,16 @@ version: { x86_64-linux-37 = { name = "torch-${version}-cp37-cp37m-linux_x86_64.whl"; url = "https://download.pytorch.org/whl/cu111/torch-${version}%2Bcu111-cp37-cp37m-linux_x86_64.whl"; - hash = "sha256-lxj066PiB+S88GqQnXKgd9RCiKkMk3mctx/eBieZjAk="; + hash = "sha256-GOTC4HpSxd+3V4LNPy3Ig1+IAhm3U+6s/gOkKxD4AJE="; }; x86_64-linux-38 = { name = "torch-${version}-cp38-cp38-linux_x86_64.whl"; url = "https://download.pytorch.org/whl/cu111/torch-${version}%2Bcu111-cp38-cp38-linux_x86_64.whl"; - hash = "sha256-qvTQMLz4CQPgalzUyYwz6rm+ExyWlIzI+FSMQhxM4eM="; + hash = "sha256-29KiXQJWCRRn92+ZddBq3Q+zYIKavUxB5HL3HafO0gc="; }; x86_64-linux-39 = { name = "torch-${version}-cp39-cp39-linux_x86_64.whl"; url = "https://download.pytorch.org/whl/cu111/torch-${version}%2Bcu111-cp39-cp39-linux_x86_64.whl"; - hash = "sha256-z0pzEiljU+E2x2SuOEAg86dmVY1iFZSDOCfoOAFhLQo="; + hash = "sha256-VCLRkELiF8KqlAMLFrP+TaW+m6jupG5+WdQKEQlVli0="; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytorch/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytorch/default.nix index 8fae54c846..35eb79d8b2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytorch/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytorch/default.nix @@ -117,7 +117,7 @@ let in buildPythonPackage rec { pname = "pytorch"; # Don't forget to update pytorch-bin to the same version. - version = "1.8.1"; + version = "1.9.0"; disabled = !isPy3k; @@ -132,7 +132,7 @@ in buildPythonPackage rec { repo = "pytorch"; rev = "v${version}"; fetchSubmodules = true; - sha256 = "sha256-HERbvmrfhWwH164GFHU/M0KbhVAuhI5sBZSxCZy8mRk="; + sha256 = "sha256-gZmEhV1zzfr/5T2uNfS+8knzyJIxnv2COWVyiAzU9jM="; }; patches = lib.optionals stdenv.isDarwin [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytradfri/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytradfri/default.nix new file mode 100644 index 0000000000..e06a7e6813 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytradfri/default.nix @@ -0,0 +1,40 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, aiocoap +, dtlssocket +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "pytradfri"; + version = "7.0.6"; + + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "home-assistant-libs"; + repo = "pytradfri"; + rev = version; + sha256 = "0ckh2waz3xpz51pmigg1q336igqvvkl2pzncszvblkwv38a0rj3a"; + }; + + propagatedBuildInputs = [ + aiocoap + dtlssocket + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "pytradfri" ]; + + meta = with lib; { + description = "Python package to communicate with the IKEA Trådfri ZigBee Gateway"; + homepage = "https://github.com/home-assistant-libs/pytradfri"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pytube/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pytube/default.nix index 086c3a8671..9cedb1ac94 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pytube/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pytube/default.nix @@ -7,7 +7,7 @@ buildPythonPackage rec { pname = "pytube"; - version = "10.8.3"; + version = "10.8.5"; disabled = pythonOlder "3.6"; @@ -15,7 +15,7 @@ buildPythonPackage rec { owner = "pytube"; repo = "pytube"; rev = "v${version}"; - sha256 = "sha256-U/TXA/0y5tsuj0q3kxacHk76wjYG6k8mPX5F3MpADmk="; + sha256 = "05w2jlrm1kqki3yq4ssf3ydmy0sf4zcychz94wxsppgr2xrghnhn"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyturbojpeg/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyturbojpeg/default.nix index 0011bc69bc..50f5c4559e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyturbojpeg/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyturbojpeg/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "pyturbojpeg"; - version = "1.5.0"; + version = "1.5.1"; src = fetchPypi { pname = "PyTurboJPEG"; inherit version; - sha256 = "sha256-juy8gVqOXKSGGq+gOBO2BuJEL2RHjjCWJDrwRCvrZIE="; + sha256 = "sha256-56FnJpnQzFPlz0v506CrwIHf9uV3R1LibnuEL7RcFCg="; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyunifi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyunifi/default.nix index dfbae696b8..0ac0a69412 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyunifi/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyunifi/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "pyunifi"; - version = "2.20.1"; + version = "2.21"; src = fetchPypi { inherit pname version; - sha256 = "b52d1b0d87365fcfed8572b5dbd8d675bffece4ab3484bf083863f278c727d3d"; + sha256 = "ea7919caee14abe741016d8e37e96bc67a43e22f77c079e55962273f39dbea4e"; }; propagatedBuildInputs = [ requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyupgrade/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyupgrade/default.nix index 74723b665b..412b032db7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyupgrade/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyupgrade/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "pyupgrade"; - version = "2.18.0"; + version = "2.19.1"; disabled = isPy27; src = fetchFromGitHub { owner = "asottile"; repo = pname; rev = "v${version}"; - sha256 = "sha256-nkMKy1NAFBG/PuPdj3LAqr0c4UqEM2R2kHKuORql2dw="; + sha256 = "sha256-zDT8VskHEX4uldMvxnb9A+FKMuvZbtEcmdVl5mghTs4="; }; checkInputs = [ pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyvex/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyvex/default.nix index fa757a39dd..b2696b101b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyvex/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyvex/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "pyvex"; - version = "9.0.7833"; + version = "9.0.8021"; src = fetchPypi { inherit pname version; - sha256 = "sha256-vasPukhDpvTNEvSy3A2H4ZkFMpLSoHB6+uuimYH1VT4="; + sha256 = "sha256-Bx6A258LgmmRBbrwY2pgf0DXdMwh9QjaA4sVbxj+kBo="; }; postPatch = lib.optionalString stdenv.isDarwin '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyvis/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyvis/default.nix new file mode 100644 index 0000000000..a0a024c56c --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyvis/default.nix @@ -0,0 +1,44 @@ +{ lib +, isPy3k +, fetchFromGitHub +, fetchpatch +, buildPythonPackage +, networkx +, jinja2 +, ipython +, jsonpickle +, numpy }: + +buildPythonPackage rec { + pname = "pyvis"; + version = "unstable-2021-04-29"; + + # We use unstable, as test are failing for 0.1.9 + src = fetchFromGitHub { + owner = "WestHealth"; + repo = pname; + rev = "4c521302abf9725dcbe7f59962baf85360b2718d"; + sha256 = "sha256-DYbHQpxtSfiLbzmBGclym/ChM0WLBzSEC/3phDTtGY8="; + }; + + patches = [ + # Remove when https://github.com/WestHealth/pyvis/pull/101 is merged. + (fetchpatch { + url = "https://github.com/WestHealth/pyvis/commit/158a34de45f970b17ffd746c6e705b89128e2445.patch"; + sha256 = "sha256-zK72nrnn5YLGNW6PKYUyHry5ORCdt1T1oH6n1X64DKg="; + }) + ]; + + propagatedBuildInputs = [ networkx jinja2 ipython jsonpickle ]; + + checkInputs = [ numpy ]; + + pythonImportsCheck = [ "pyvis" ]; + + meta = with lib; { + homepage = "https://github.com/WestHealth/pyvis"; + description = "Python package for creating and visualizing interactive network graphs"; + license = licenses.bsd3; + maintainers = with maintainers; [ erictapen ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyvmomi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyvmomi/default.nix index b6a775327f..3c7082d0e6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyvmomi/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyvmomi/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "pyvmomi"; - version = "7.0.1"; + version = "7.0.2"; src = fetchFromGitHub { owner = "vmware"; repo = pname; rev = "v${version}"; - sha256 = "1i7zni4ygdikc22wfrbnzwqh6qy402s3di6sdlfcvky2y7fzx52x"; + sha256 = "0li6g72ps1vxjzqhz10n02fl6cs069173jd9y4ih5am7vwhrwgpa"; }; # requires old version of vcrpy diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pywbem/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pywbem/default.nix index d6c389c22a..be1d060709 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pywbem/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pywbem/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "pywbem"; - version = "1.1.3"; + version = "1.2.0"; src = fetchPypi { inherit pname version; - sha256 = "2abb6443f4debae56af7abefadb9fa5b8af9b53fc9bcf67f6c01a78db1064300"; + sha256 = "8ef48185e0adbaeb9bd5181c4c5de951f6d58d54e2e1d7e87a9834e10eabe957"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pywemo/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pywemo/default.nix index 7448f1f7f2..ceb190fe75 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pywemo/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pywemo/default.nix @@ -47,11 +47,6 @@ buildPythonPackage rec { pytestCheckHook ]; - disabledTests = [ - # https://github.com/NixOS/nixpkgs/issues/124165 - "test_bridge_getdevicestatus" - ]; - pythonImportsCheck = [ "pywemo" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pywinrm/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pywinrm/default.nix index 798364afd0..629c75bfea 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pywinrm/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pywinrm/default.nix @@ -13,12 +13,12 @@ buildPythonPackage rec { pname = "pywinrm"; - version = "0.4.1"; + version = "0.4.2"; disabled = isPy38; src = fetchPypi { inherit pname version; - sha256 = "4ede5c6c85b53780ad0dbf9abef2fa2ea58f44c82256a84a63eae5f1205cea81"; + sha256 = "e7865ec5e46e7fedb859c656cfaba4fcf669de7c042b5a7d8a759544636bcfb7"; }; checkInputs = [ mock pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyworld/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyworld/default.nix index 73cd1fcea2..bbe5a4c135 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyworld/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyworld/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "pyworld"; - version = "0.2.12"; + version = "0.3.0"; src = fetchPypi { inherit pname version; - sha256 = "896c910696975855578d855f490f94d7a57119e0a75f7f15e11fdf58ba891627"; + sha256 = "e19b5d8445e0c4fc45ded71863aeaaf2680064b4626b0e7c90f72e9ace9f6b5b"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyyaml-env-tag/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyyaml-env-tag/default.nix new file mode 100644 index 0000000000..f81bbbd7ac --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyyaml-env-tag/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, fetchPypi +, pythonOlder +, pyyaml +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "pyyaml-env-tag"; + version = "0.1"; + disabled = pythonOlder "3.6"; + + src = fetchPypi { + pname = "pyyaml_env_tag"; + inherit version; + sha256 = "1nsva88jsmwn0cb9jnrfiz4dvs9xakkpgfii7g1xwkx1pmsjc2bh"; + }; + + propagatedBuildInputs = [ + pyyaml + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "yaml_env_tag" ]; + + meta = with lib; { + description = "Custom YAML tag for referencing environment variables"; + homepage = "https://github.com/waylan/pyyaml-env-tag"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyzmq/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/pyzmq/default.nix index 953a327d19..5aca8d6d66 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyzmq/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/pyzmq/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "pyzmq"; - version = "22.0.3"; + version = "22.1.0"; src = fetchPypi { inherit pname version; - sha256 = "f7f63ce127980d40f3e6a5fdb87abf17ce1a7c2bd8bf2c7560e1bbce8ab1f92d"; + sha256 = "7040d6dd85ea65703904d023d7f57fab793d7ffee9ba9e14f3b897f34ff2415d"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/qiling/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/qiling/default.nix index 9513280f3c..0bd86c3caf 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/qiling/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/qiling/default.nix @@ -11,11 +11,11 @@ }: buildPythonPackage rec { pname = "qiling"; - version = "1.2.3"; + version = "1.2.4"; src = fetchPypi { inherit pname version; - sha256 = "e3ed09f9e080559e73e2a9199649b934b3594f653079d1e7da4992340c19eb64"; + sha256 = "ecaa4415eea44f6f48021c1f7794c0d9fae7d64c8e43a3ff1d5de8e99bd963aa"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/qscintilla-qt5/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/qscintilla-qt5/default.nix index 05c12c1c62..70ee430891 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/qscintilla-qt5/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/qscintilla-qt5/default.nix @@ -3,13 +3,17 @@ , qscintilla , qtbase }: -with pythonPackages; -buildPythonPackage { + +let + inherit (pythonPackages) buildPythonPackage isPy3k python sip_4 pyqt5; +in buildPythonPackage rec { pname = "qscintilla"; version = qscintilla.version; src = qscintilla.src; format = "other"; + disabled = !isPy3k; + nativeBuildInputs = [ sip_4 qtbase ]; buildInputs = [ qscintilla ]; propagatedBuildInputs = [ pyqt5 ]; @@ -38,11 +42,21 @@ buildPythonPackage { --qsci-incdir=${qscintilla}/include \ --qsci-featuresdir=${qscintilla}/mkspecs/features \ --qsci-libdir=${qscintilla}/lib \ - --pyqt-sipdir=${pyqt5}/share/sip/PyQt5 \ + --pyqt-sipdir=${pyqt5}/${python.sitePackages}/PyQt5/bindings \ --qsci-sipdir=$out/share/sip/PyQt5 \ --sip-incdir=${sip_4}/include ''; + postInstall = '' + # Needed by pythonImportsCheck to find the module + export PYTHONPATH="$out/${python.sitePackages}:$PYTHONPATH" + ''; + + # Checked using pythonImportsCheck + doCheck = false; + + pythonImportsCheck = [ "PyQt5.Qsci" ]; + meta = with lib; { description = "A Python binding to QScintilla, Qt based text editing control"; license = licenses.lgpl21Plus; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/qserve/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/qserve/default.nix index 0548b6fdf1..f316e3fb65 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/qserve/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/qserve/default.nix @@ -6,13 +6,13 @@ buildPythonPackage rec { pname = "qserve"; - version = "0.2.8"; + version = "0.3.0"; disabled = isPy3k; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "0b04b2d4d11b464ff1efd42a9ea9f8136187d59f4076f57c9ba95361d41cd7ed"; + sha256 = "dac1ee4ec60af6beb9af8f3f02d08d6db4cc9868b0915d626cb900a50d003ed4"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/qtconsole/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/qtconsole/default.nix index 47c36fcc12..a5173a0a25 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/qtconsole/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/qtconsole/default.nix @@ -15,11 +15,11 @@ buildPythonPackage rec { pname = "qtconsole"; - version = "5.0.3"; + version = "5.1.0"; src = fetchPypi { inherit pname version; - sha256 = "c091a35607d2a2432e004c4a112d241ce908086570cf68594176dd52ccaa212d"; + sha256 = "12c734494901658787339dea9bbd82f3dc0d5e394071377a1c77b4a0954d7d8b"; }; checkInputs = [ nose ] ++ lib.optionals isPy27 [mock]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/queuelib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/queuelib/default.nix index 3814663c04..7534974237 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/queuelib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/queuelib/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "queuelib"; - version = "1.5.0"; + version = "1.6.1"; src = fetchPypi { inherit pname version; - sha256 = "42b413295551bdc24ed9376c1a2cd7d0b1b0fa4746b77b27ca2b797a276a1a17"; + sha256 = "631d067c9be57e395c382d680d3653ca1452cd29e8da25c5e8d94b5c0c528c31"; }; buildInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/radish-bdd/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/radish-bdd/default.nix index b2d22346dd..ac01b853c8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/radish-bdd/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/radish-bdd/default.nix @@ -18,14 +18,14 @@ buildPythonPackage rec { pname = "radish-bdd"; - version = "0.13.2"; + version = "0.13.4"; # Pypi package does not have necessary test fixtures. src = fetchFromGitHub { owner = pname; repo = "radish"; rev = "v${version}"; - sha256 = "1k7l0j8w221pa6k990x4rfm7km4asx5zy4zpzvh029lb9nw2pp8b"; + sha256 = "1slfgh61648i009qj8156qipy21a6zm8qzjk00kbm5kk5z9jfryi"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/readlike/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/readlike/default.nix new file mode 100644 index 0000000000..f2e3d11e7e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/readlike/default.nix @@ -0,0 +1,28 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, python +}: + +buildPythonPackage rec { + pname = "readlike"; + version = "0.1.3"; + + src = fetchFromGitHub { + owner = "jangler"; + repo = "readlike"; + rev = version; + sha256 = "1mw8j8ads8hqdbz42siwpffi4wi5s33z9g14a5c2i7vxp8m68qc1"; + }; + + checkPhase = '' + ${python.interpreter} -m unittest discover -s tests + ''; + + meta = with lib; { + description = "GNU Readline-like line editing module"; + homepage = "https://github.com/jangler/readlike"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/regex/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/regex/default.nix index efb299161b..0445b02c1f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/regex/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/regex/default.nix @@ -2,30 +2,30 @@ , buildPythonPackage , fetchPypi , python +, isPy27 }: - buildPythonPackage rec { pname = "regex"; - version = "2021.3.17"; + version = "2021.4.4"; src = fetchPypi { inherit pname version; - sha256 = "4b8a1fb724904139149a43e172850f35aa6ea97fb0545244dc0b805e0154ed68"; + sha256 = "sha256-Uro9P5uULEnX5LwQW7KFUcRAZfE5plBiq3kSvvEMmvs="; }; - postCheck = '' - echo "We now run tests ourselves, since the setuptools installer doesn't." - ${python.interpreter} -c 'import test_regex; test_regex.test_main();' + # Sources for different Python releases are located in same folder + checkPhase = '' + rm -r ${if !isPy27 then "regex_2" else "regex_3"} + ${python.interpreter} -m unittest ''; - # No tests in archive - doCheck = false; + pythonImportsCheck = [ "regex" ]; - meta = { + meta = with lib; { description = "Alternative regular expression module, to replace re"; homepage = "https://bitbucket.org/mrabarnett/mrab-regex"; - license = lib.licenses.psfl; - maintainers = with lib.maintainers; [ abbradar ]; + license = licenses.psfl; + maintainers = with maintainers; [ abbradar ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/relatorio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/relatorio/default.nix index b723cd0b18..9e673de926 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/relatorio/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/relatorio/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "relatorio"; - version = "0.9.2"; + version = "0.9.3"; src = fetchPypi { inherit pname version; - sha256 = "0753e78b235b1e8da275509351257a861cf2cf9fafe1b414f8c1deb858a4f94e"; + sha256 = "1d5d08f5323a1cdf6d860cd13c3408482a822d9924899927a8c7cd2ebeaa8699"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/reparser/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/reparser/default.nix new file mode 100644 index 0000000000..90d701a0e4 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/reparser/default.nix @@ -0,0 +1,31 @@ +{ lib +, buildPythonPackage +, isPy27 +, fetchFromGitHub +}: + +buildPythonPackage rec { + pname = "reparser"; + version = "1.4.3"; + + disabled = isPy27; + + src = fetchFromGitHub { + owner = "xmikos"; + repo = "reparser"; + rev = "v${version}"; + sha256 = "04v7h52wny0j2qj37501nk33j0s4amm134kagdicx2is49zylzq1"; + }; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "reparser" ]; + + meta = with lib; { + description = "Simple regex-based lexer/parser for inline markup"; + homepage = "https://github.com/xmikos/reparser"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/reportlab/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/reportlab/default.nix index 7b5cc0a8c2..c9f2600efe 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/reportlab/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/reportlab/default.nix @@ -11,11 +11,11 @@ let ft = freetype.overrideAttrs (oldArgs: { dontDisableStatic = true; }); in buildPythonPackage rec { pname = "reportlab"; - version = "3.5.66"; + version = "3.5.67"; src = fetchPypi { inherit pname version; - sha256 = "63fba51babad0047def4ffaa41d0065248ca39d680e98dc9e3010de5425539b4"; + sha256 = "0cf2206c73fbca752c8bd39e12bb9ad7f2d01e6fcb2b25b9eaf94ea042fe86c9"; }; checkInputs = [ glibcLocales ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/requests-aws4auth/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/requests-aws4auth/default.nix index 3267b0a786..fa97942e22 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/requests-aws4auth/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/requests-aws4auth/default.nix @@ -3,11 +3,11 @@ with lib; buildPythonPackage rec { pname = "requests-aws4auth"; - version = "1.0.1"; + version = "1.1.1"; src = fetchPypi { inherit pname version; - sha256 = "9a4a5f4a61c49f098f5f669410308ac5b0ea2682fd511ee3a4f9ff73b5bb275a"; + sha256 = "c0883346ce30b5018903a67da88df72f73ff06e1a320845bba9cd85e811ba0ba"; }; propagatedBuildInputs = [ requests six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/requests-cache/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/requests-cache/default.nix index d39fcc5f2a..35cf74ca84 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/requests-cache/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/requests-cache/default.nix @@ -1,21 +1,58 @@ -{ lib, buildPythonPackage, fetchPypi -, mock, requests, six, urllib3 }: +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, attrs +, itsdangerous +, requests +, url-normalize +, pytestCheckHook +, requests-mock +, timeout-decorator +}: buildPythonPackage rec { pname = "requests-cache"; - version = "0.5.2"; + version = "0.6.4"; - src = fetchPypi { - inherit pname version; - sha256 = "813023269686045f8e01e2289cc1e7e9ae5ab22ddd1e2849a9093ab3ab7270eb"; + disabled = pythonOlder "3.6"; + + format = "pyproject"; + + src = fetchFromGitHub { + owner = "reclosedev"; + repo = "requests-cache"; + rev = "v${version}"; + sha256 = "10rvs611j16kakqx38kpqpc1v0dfb9rmbz2whpskswb1lsksv3j9"; }; - buildInputs = [ mock ]; - propagatedBuildInputs = [ requests six urllib3 ]; + propagatedBuildInputs = [ + attrs + itsdangerous + requests + url-normalize + ]; + + checkInputs = [ + pytestCheckHook + requests-mock + timeout-decorator + ]; + + disabledTestPaths = [ + # connect to database on localhost + "tests/integration/test_cache.py" + "tests/integration/test_dynamodb.py" + "tests/integration/test_gridfs.py" + "tests/integration/test_mongodb.py" + "tests/integration/test_redis.py" + ]; + + pythonImportsCheck = [ "requests_cache" ]; meta = with lib; { description = "Persistent cache for requests library"; - homepage = "https://pypi.python.org/pypi/requests-cache"; + homepage = "https://github.com/reclosedev/requests-cache"; license = licenses.bsd3; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/requests-hawk/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/requests-hawk/default.nix index 188e66b5c7..c59cf9cd88 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/requests-hawk/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/requests-hawk/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "requests-hawk"; - version = "1.1.0"; + version = "1.1.1"; src = fetchPypi { inherit pname version; - sha256 = "1a5e61cab14627f1b5ba7de0e3fb2b681007ff7b2a49110d504e5cd6d7fd62d6"; + sha256 = "4c74bd31b581f6d2b36d575bb537b1f29469509f560f5050339a48195d48929b"; }; propagatedBuildInputs = [ mohawk requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/requests-mock/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/requests-mock/default.nix index 5e85ba7d38..85d7c47baa 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/requests-mock/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/requests-mock/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "requests-mock"; - version = "1.8.0"; + version = "1.9.3"; src = fetchPypi { inherit pname version; - sha256 = "e68f46844e4cee9d447150343c9ae875f99fa8037c6dcf5f15bf1fe9ab43d226"; + sha256 = "8d72abe54546c1fc9696fa1516672f1031d72a55a1d66c85184f972a24ba0eba"; }; patchPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/requests/0001-Prefer-NixOS-Nix-default-CA-bundles-over-certifi.patch b/third_party/nixpkgs/pkgs/development/python-modules/requests/0001-Prefer-NixOS-Nix-default-CA-bundles-over-certifi.patch new file mode 100644 index 0000000000..de6a4b5c1b --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/requests/0001-Prefer-NixOS-Nix-default-CA-bundles-over-certifi.patch @@ -0,0 +1,60 @@ +From b36083efafec5a3c1c5864cd0b62367ddf3856ae Mon Sep 17 00:00:00 2001 +From: Keshav Kini +Date: Sun, 16 May 2021 20:35:24 -0700 +Subject: [PATCH] Prefer NixOS/Nix default CA bundles over certifi + +Normally, requests gets its default CA bundle from the certifi +package. On NixOS and when using Nix on non-NixOS platforms, we would +rather default to using our own certificate bundles controlled by the +Nix/NixOS user. + +This commit overrides requests.certs.where(), which previously was +just aliased to certifi.where(), so that now it does the following: + +- When run by Nix on non-NixOS, the environment variable + $NIX_SSL_CERT_FILE will point to the CA bundle we're using, so we + use that. + +- When running on NixOS, the CA bundle we're using has the static path + /etc/ssl/certs/ca-certificates.crt , so we use that. + +- Otherwise, we fall back to the original behavior of using certifi's + CA bundle. Higher in the call stack, users of requests can also + explicitly specify a CA bundle to use, which overrides all this + logic. +--- + requests/certs.py | 18 +++++++++++++++++- + 1 file changed, 17 insertions(+), 1 deletion(-) + +diff --git a/requests/certs.py b/requests/certs.py +index d1a378d7..faf462b7 100644 +--- a/requests/certs.py ++++ b/requests/certs.py +@@ -12,7 +12,23 @@ If you are packaging Requests, e.g., for a Linux distribution or a managed + environment, you can change the definition of where() to return a separately + packaged CA bundle. + """ +-from certifi import where ++ ++import os ++ ++import certifi ++ ++ ++def where(): ++ nix_ssl_cert_file = os.getenv("NIX_SSL_CERT_FILE") ++ if nix_ssl_cert_file and os.path.exists(nix_ssl_cert_file): ++ return nix_ssl_cert_file ++ ++ nixos_ca_bundle = "/etc/ssl/certs/ca-certificates.crt" ++ if os.path.exists(nixos_ca_bundle): ++ return nixos_ca_bundle ++ ++ return certifi.where() ++ + + if __name__ == '__main__': + print(where()) +-- +2.31.1 + diff --git a/third_party/nixpkgs/pkgs/development/python-modules/requests/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/requests/default.nix index 72feafc771..8b5514f639 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/requests/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/requests/default.nix @@ -20,6 +20,8 @@ buildPythonPackage rec { sha256 = "sha256-J5c91KkEpPE7JjoZyGbBO5KjntHJZGVfAl8/jT11uAQ="; }; + patches = [ ./0001-Prefer-NixOS-Nix-default-CA-bundles-over-certifi.patch ]; + postPatch = '' # Use latest idna substituteInPlace setup.py --replace ",<3" "" diff --git a/third_party/nixpkgs/pkgs/development/python-modules/resolvelib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/resolvelib/default.nix index db3ecbcc86..a146cac392 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/resolvelib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/resolvelib/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "resolvelib"; - version = "0.7.0"; + version = "0.7.1"; src = fetchFromGitHub { owner = "sarugaku"; repo = "resolvelib"; rev = version; - sha256 = "0r7cxwrfvpqz4kd7pdf8fsynzlmi6c754jd5hzd6vssc1zlyvvhx"; + sha256 = "1fqz75riagizihvf4j7wc3zjw6kmg1dd8sf49aszyml105kb33n8"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/responses/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/responses/default.nix index 6b2bd4ac19..8b700701d3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/responses/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/responses/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "responses"; - version = "0.13.1"; + version = "0.13.3"; src = fetchPypi { inherit pname version; - sha256 = "cf62ab0f4119b81d485521b2c950d8aa55a885c90126488450b7acb8ee3f77ac"; + sha256 = "18a5b88eb24143adbf2b4100f328a2f5bfa72fbdacf12d97d41f07c26c45553d"; }; propagatedBuildInputs = [ cookies mock requests six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/restfly/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/restfly/default.nix index b572b0a385..126ff8f228 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/restfly/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/restfly/default.nix @@ -11,13 +11,13 @@ buildPythonPackage rec { pname = "restfly"; - version = "1.3.5"; + version = "1.4.0"; src = fetchFromGitHub { owner = "stevemcgrath"; repo = pname; rev = version; - sha256 = "0cq07wj6g3kg7i4qyjp3n3pv13k9p4p43rd6kn139wsn1mh8fr56"; + sha256 = "0cmx15i57cxqw7naz8nkpqjckd6lpd2vszrkl82hvnajdimcd9wy"; }; propagatedBuildInputs = [ @@ -32,6 +32,11 @@ buildPythonPackage rec { pytestCheckHook ]; + disabledTests = [ + # Test requires network access + "test_session_ssl_error" + ]; + pythonImportsCheck = [ "restfly" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/rfc3986/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/rfc3986/default.nix index 93f2f2ce37..71a7d0730b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/rfc3986/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/rfc3986/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "rfc3986"; - version = "1.4.0"; + version = "1.5.0"; src = fetchPypi { inherit pname version; - sha256 = "17dvx15m3r49bmif5zlli8kzjd6bys6psixzbp14sd5367d9h8qi"; + sha256 = "270aaf10d87d0d4e095063c65bf3ddbc6ee3d0b226328ce21e036f946e421835"; }; propagatedBuildInputs = [ idna ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/rflink/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/rflink/default.nix new file mode 100644 index 0000000000..781363334e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/rflink/default.nix @@ -0,0 +1,48 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, async-timeout +, docopt +, pyserial +, pyserial-asyncio +, setuptools +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "rflink"; + version = "0.0.58"; + + src = fetchFromGitHub { + owner = "aequitas"; + repo = "python-rflink"; + rev = version; + sha256 = "1zab55lsw419gg0jfrl69ap6128vbi3wdmg5z7qin65ijpjdhasc"; + }; + + postPatch = '' + substituteInPlace setup.py \ + --replace "version=version_from_git()" "version='${version}'" + ''; + + propagatedBuildInputs = [ + async-timeout + docopt + pyserial + pyserial-asyncio + setuptools + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "rflink.protocol" ]; + + meta = with lib; { + description = "Library and CLI tools for interacting with RFlink 433MHz transceiver"; + homepage = "https://github.com/aequitas/python-rflink"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/rich/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/rich/default.nix index d292eaa522..e939d3fc93 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/rich/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/rich/default.nix @@ -5,7 +5,6 @@ , CommonMark , colorama , dataclasses -, ipywidgets , poetry-core , pygments , typing-extensions @@ -14,7 +13,7 @@ buildPythonPackage rec { pname = "rich"; - version = "10.1.0"; + version = "10.4.0"; format = "pyproject"; disabled = pythonOlder "3.6"; @@ -22,7 +21,7 @@ buildPythonPackage rec { owner = "willmcgugan"; repo = pname; rev = "v${version}"; - sha256 = "sha256-HH+k9uiK34yoqu83rknCIe2DpoqJRHkcqABuj8zjzqs="; + sha256 = "0z01bvn8zx69simk26jv5ngvqv35fs7i0wbg1hjcd37lmv3v6261"; }; nativeBuildInputs = [ poetry-core ]; @@ -30,7 +29,6 @@ buildPythonPackage rec { propagatedBuildInputs = [ CommonMark colorama - ipywidgets pygments typing-extensions ] ++ lib.optional (pythonOlder "3.7") [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/robotframework-requests/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/robotframework-requests/default.nix index 5935c23185..f5ab684f74 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/robotframework-requests/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/robotframework-requests/default.nix @@ -8,12 +8,12 @@ }: buildPythonPackage rec { - version = "0.8.1"; + version = "0.9.1"; pname = "robotframework-requests"; src = fetchPypi { inherit pname version; - sha256 = "b26f4ae617ff8c4b522fba422b7c8f83545a98aec3e2deb7f1aa53dcd68defe2"; + sha256 = "22ea105846b28ddfc49713c59a363ad636ece5e308476dea59e73e3c9b544755"; }; buildInputs = [ unittest2 ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/robotframework/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/robotframework/default.nix index 027d0af303..449af6d089 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/robotframework/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/robotframework/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "robotframework"; - version = "4.0.1"; + version = "4.0.3"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "1nkph0slrhss6y52y8jgbdc6m8hbqjilrwp3r00wwyqdifrfa1i6"; + sha256 = "1wqz7szbq2g3kkm7frwik4jb5m7517306sz8nxx8hxaw4n6y1i5d"; }; checkInputs = [ jsonschema ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/pyroon/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/roonapi/default.nix similarity index 93% rename from third_party/nixpkgs/pkgs/development/python-modules/pyroon/default.nix rename to third_party/nixpkgs/pkgs/development/python-modules/roonapi/default.nix index c27c70be58..677483e882 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/pyroon/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/roonapi/default.nix @@ -7,18 +7,18 @@ , pythonOlder , requests , six -, websocket_client +, websocket-client }: buildPythonPackage rec { - pname = "pyroon"; + pname = "roonapi"; version = "0.0.37"; format = "pyproject"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "pavoni"; - repo = pname; + repo = "pyroon"; rev = version; sha256 = "1hxr473z9h3kb91m3ygina58pfwfyjsv1yb29spxmnbzvk34rzzz"; }; @@ -31,7 +31,7 @@ buildPythonPackage rec { ifaddr requests six - websocket_client + websocket-client ]; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/rpy2/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/rpy2/default.nix index f27bc76cc3..6e83db8a96 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/rpy2/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/rpy2/default.nix @@ -24,13 +24,13 @@ }: buildPythonPackage rec { - version = "3.4.3"; + version = "3.4.5"; pname = "rpy2"; disabled = isPyPy; src = fetchPypi { inherit version pname; - sha256 = "a39f2d75c24c688d5f48dfb2ef82efc006f2a51591941743026e1182353bf558"; + sha256 = "5d31a5ea43f5a59f6dec30faca87edb01fc9b8affa0beae96a99be923bd7dab3"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/rq/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/rq/default.nix index 71381e5cf2..e11a48f6a3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/rq/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/rq/default.nix @@ -2,14 +2,14 @@ buildPythonPackage rec { pname = "rq"; - version = "1.7.0"; + version = "1.8.1"; disabled = isPy27; src = fetchFromGitHub { owner = "rq"; repo = "rq"; rev = "v${version}"; - sha256 = "1i7cbcrzqx52immwy8h5ps7x46sqfk9r2lgwjf01nv9mkc3ab8cj"; + sha256 = "1lfv3sb27v5xw3y67lirp877gg9230d28qmykxipvhcqwzqc2dqb"; }; # test require a running redis rerver, which is something we can't do yet diff --git a/third_party/nixpkgs/pkgs/development/python-modules/rtmidi-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/rtmidi-python/default.nix index 4e6da0b8d4..e1565fa6c3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/rtmidi-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/rtmidi-python/default.nix @@ -1,4 +1,4 @@ -{ lib, buildPythonPackage, fetchPypi, cython, alsaLib }: +{ lib, buildPythonPackage, fetchPypi, cython, alsa-lib }: buildPythonPackage rec { pname = "rtmidi-python"; @@ -14,7 +14,7 @@ buildPythonPackage rec { ''; nativeBuildInputs = [ cython ]; - buildInputs = [ alsaLib ]; + buildInputs = [ alsa-lib ]; setupPyBuildFlags = [ "--from-cython" ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ruamel_yaml/0.16.nix b/third_party/nixpkgs/pkgs/development/python-modules/ruamel_yaml/0.16.nix new file mode 100644 index 0000000000..ed2ddf3306 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/ruamel_yaml/0.16.nix @@ -0,0 +1,40 @@ +{ lib +, buildPythonPackage +, fetchPypi +, ruamel_base +, ruamel_ordereddict ? null +, ruamel_yaml_clib ? null +, isPy3k +, isPyPy +}: + +buildPythonPackage rec { + pname = "ruamel.yaml"; + version = "0.16.13"; + + src = fetchPypi { + inherit pname version; + sha256 = "0hm9yg785f46bkrgqknd6fdvmkby9dpzjnm0b63qf0i748acaj5v"; + }; + + # Tests use relative paths + doCheck = false; + + propagatedBuildInputs = [ ruamel_base ] + ++ lib.optional (!isPy3k) ruamel_ordereddict + ++ lib.optional (!isPyPy) ruamel_yaml_clib; + + # causes namespace clash on py27 + dontUsePythonImportsCheck = !isPy3k; + pythonImportsCheck = [ + "ruamel.yaml" + "ruamel.base" + ]; + + meta = with lib; { + description = "YAML parser/emitter that supports roundtrip preservation of comments, seq/map flow style, and map key order"; + homepage = "https://sourceforge.net/projects/ruamel-yaml/"; + license = licenses.mit; + }; + +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ruamel_yaml/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ruamel_yaml/default.nix index 1eaf86d69c..863b62c1bc 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/ruamel_yaml/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/ruamel_yaml/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "ruamel.yaml"; - version = "0.16.13"; + version = "0.17.9"; src = fetchPypi { inherit pname version; - sha256 = "bb48c514222702878759a05af96f4b7ecdba9b33cd4efcf25c86b882cef3a942"; + sha256 = "374373b4743aee9f6d9f40bea600fe020a7ac7ae36b838b4a6a93f72b584a14c"; }; # Tests use relative paths diff --git a/third_party/nixpkgs/pkgs/development/python-modules/runway-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/runway-python/default.nix index 9244a94d23..c47054632c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/runway-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/runway-python/default.nix @@ -21,7 +21,7 @@ , deepdiff , pytestCheckHook , pytestcov -, websocket_client +, websocket-client }: buildPythonPackage rec { @@ -62,7 +62,7 @@ buildPythonPackage rec { deepdiff pytestCheckHook pytestcov - websocket_client + websocket-client ]; disabledTests = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/ruyaml/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/ruyaml/default.nix new file mode 100644 index 0000000000..3b5a0d4128 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/ruyaml/default.nix @@ -0,0 +1,46 @@ +{ lib +, buildPythonPackage +, distro +, fetchFromGitHub +, pytestCheckHook +, pythonOlder +, setuptools-scm +, setuptools-scm-git-archive +}: + +buildPythonPackage rec { + pname = "ruyaml"; + version = "0.90.0.2"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "pycontribs"; + repo = pname; + rev = version; + sha256 = "0gxvwry7n1gczxkjzyfrr3fammllkvnnamja4yln8xrg3n1h89al"; + }; + + nativeBuildInputs = [ + setuptools-scm + setuptools-scm-git-archive + ]; + + SETUPTOOLS_SCM_PRETEND_VERSION = version; + + propagatedBuildInputs = [ + distro + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "ruyaml" ]; + + meta = with lib; { + description = "YAML 1.2 loader/dumper package for Python"; + homepage = "https://ruyaml.readthedocs.io/"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/rx/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/rx/default.nix index 5fd9064020..5febbe9f9a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/rx/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/rx/default.nix @@ -2,7 +2,7 @@ buildPythonPackage rec { pname = "rx"; - version = "3.1.1"; + version = "3.2.0"; disabled = pythonOlder "3.6"; # There are no tests on the pypi source @@ -10,7 +10,7 @@ buildPythonPackage rec { owner = "ReactiveX"; repo = "rxpy"; rev = "v${version}"; - sha256 = "0p0cs67l40npkvwgn5sb18l1b6df1b9fg6rzlqkwk2aa0v3cpvhf"; + sha256 = "159ln0c721rrdz0mqyl3zvv6qsry7ql7ddlpwpnxs9q15ik15mnj"; }; checkInputs = [ nose ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/s3fs/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/s3fs/default.nix index 8670186586..467fe26d24 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/s3fs/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/s3fs/default.nix @@ -1,24 +1,38 @@ -{ lib, buildPythonPackage, fetchPypi, docutils, aiobotocore, fsspec }: +{ lib +, buildPythonPackage +, fetchPypi +, docutils +, aiobotocore +, fsspec +}: buildPythonPackage rec { pname = "s3fs"; - version = "0.5.2"; + version = "2021.6.0"; src = fetchPypi { inherit pname version; - sha256 = "87e5210415db17b9de18c77bcfc4a301570cc9030ee112b77dc47ab82426bae1"; + sha256 = "53790061e220713918602c1f110e6a84d6e3e22aaba27b8e134cc56a3ab6284c"; }; - buildInputs = [ docutils ]; - propagatedBuildInputs = [ aiobotocore fsspec ]; + buildInputs = [ + docutils + ]; + + propagatedBuildInputs = [ + aiobotocore + fsspec + ]; # Depends on `moto` which has a long dependency chain with exact # version requirements that can't be made to work with current # pythonPackages. doCheck = false; + pythonImportsCheck = [ "s3fs" ]; + meta = with lib; { - description = "S3FS builds on boto3 to provide a convenient Python filesystem interface for S3."; + description = "S3FS builds on boto3 to provide a convenient Python filesystem interface for S3"; homepage = "https://github.com/dask/s3fs/"; license = licenses.bsd3; maintainers = with maintainers; [ teh ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/s3transfer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/s3transfer/default.nix index 0ef7378fbf..e41e4165b9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/s3transfer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/s3transfer/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "s3transfer"; - version = "0.3.6"; + version = "0.4.2"; src = fetchPypi { inherit pname version; - sha256 = "c5dadf598762899d8cfaecf68eba649cd25b0ce93b6c954b156aaa3eed160547"; + sha256 = "sha256-ywIvSxZVHt67sxo3fT8JYA262nNj2MXbeXbn9Hcy4bI="; }; propagatedBuildInputs = diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sagemaker/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sagemaker/default.nix index c9bad89d93..b61d8e9699 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sagemaker/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sagemaker/default.nix @@ -16,11 +16,11 @@ buildPythonPackage rec { pname = "sagemaker"; - version = "2.38.0"; + version = "2.46.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-7cIGr49fKI0zQmX4/9v/gW5yB4kfeQJ3H/Vvgl9CKuY="; + sha256 = "4f66f8c56b870e7a6f9a3882790a4074f2df26a0fe9605bc5d71e186db193525"; }; pythonImportsCheck = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/samsungctl/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/samsungctl/default.nix index d29e89db84..174af90235 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/samsungctl/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/samsungctl/default.nix @@ -1,5 +1,5 @@ { lib, buildPythonPackage, fetchPypi -, websocket_client +, websocket-client }: buildPythonPackage rec { @@ -12,7 +12,7 @@ buildPythonPackage rec { }; propagatedBuildInputs = [ - websocket_client + websocket-client ]; # no tests diff --git a/third_party/nixpkgs/pkgs/development/python-modules/samsungtvws/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/samsungtvws/default.nix index 3a12568c4d..31fa56a347 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/samsungtvws/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/samsungtvws/default.nix @@ -1,6 +1,6 @@ { lib, buildPythonPackage, fetchPypi, isPy27 , requests -, websocket_client +, websocket-client }: buildPythonPackage rec { @@ -14,7 +14,7 @@ buildPythonPackage rec { }; propagatedBuildInputs = [ - websocket_client + websocket-client requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sanic-testing/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sanic-testing/default.nix index e5194e36bd..b59781e5c4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sanic-testing/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sanic-testing/default.nix @@ -2,7 +2,6 @@ , buildPythonPackage , fetchFromGitHub , pytestCheckHook -, httpcore , httpx , pytest-asyncio , sanic @@ -11,22 +10,31 @@ buildPythonPackage rec { pname = "sanic-testing"; - version = "0.3.1"; + version = "0.6.0"; src = fetchFromGitHub { owner = "sanic-org"; repo = "sanic-testing"; rev = "v${version}"; - hash = "sha256-hBAq+/BKs0a01M89Nb8HaClqxB+W5PTfjVzef/m9SWs="; + sha256 = "1pf619cd3dckn3d8gh18vbn7dflvb0mzpf6frx4y950x2j3rdplk"; }; - postPatch = '' - substituteInPlace setup.py \ - --replace 'httpx>=0.16, <0.18' 'httpx' \ - --replace 'httpcore==0.12.*' 'httpcore' - ''; + propagatedBuildInputs = [ + httpx + sanic + websockets + ]; - propagatedBuildInputs = [ httpx sanic websockets httpcore ]; + checkInputs = [ + pytest-asyncio + pytestCheckHook + ]; + + postPatch = '' + # https://github.com/sanic-org/sanic-testing/issues/19 + substituteInPlace setup.py \ + --replace '"websockets==8.1",' '"websockets>=9.1",' + ''; # `sanic` is explicitly set to null when building `sanic` itself # to prevent infinite recursion. In that case we skip running @@ -34,7 +42,6 @@ buildPythonPackage rec { doCheck = sanic != null; dontUsePythonImportsCheck = sanic == null; - checkInputs = [ pytestCheckHook pytest-asyncio ]; pythonImportsCheck = [ "sanic_testing" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sanic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sanic/default.nix index 5f610f6fea..cc7be4c93d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sanic/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sanic/default.nix @@ -1,24 +1,52 @@ -{ lib, buildPythonPackage, fetchPypi, doCheck ? true -, aiofiles, httptools, multidict, sanic-routing, ujson, uvloop, websockets -, pytestCheckHook, beautifulsoup4, gunicorn, uvicorn, sanic-testing -, pytest-benchmark, pytest-sanic, pytest-sugar, pytestcov +{ lib +, aiofiles +, beautifulsoup4 +, buildPythonPackage +, doCheck ? true +, fetchFromGitHub +, fetchpatch +, gunicorn +, httptools +, multidict +, pytest-asyncio +, pytest-benchmark +, pytest-sanic +, pytest-sugar +, pytestCheckHook +, sanic-routing +, sanic-testing +, ujson +, uvicorn +, uvloop +, websockets }: buildPythonPackage rec { pname = "sanic"; version = "21.3.4"; - src = fetchPypi { - inherit pname version; - sha256 = "1cbd12b9138b3ca69656286b0be91fff02b826e8cb72dd76a2ca8c5eb1288d8e"; + src = fetchFromGitHub { + owner = "sanic-org"; + repo = pname; + rev = "v${version}"; + sha256 = "0vldlic8gqcf56fqb31igycqf11syd9csk66v34w6dim54lcny2b"; }; + patches = [ + # Allow later websockets release, https://github.com/sanic-org/sanic/pull/2154 + (fetchpatch { + name = "later-websockets.patch"; + url = "https://github.com/sanic-org/sanic/commit/5fb820b5c1ce395e86a1ee11996790c65ec7bc65.patch"; + sha256 = "1glvq23pf1sxqjnrz0w8rr7nsnyz82k1479b3rm8szfkjg9q5d1w"; + }) + ]; + postPatch = '' # Loosen dependency requirements. substituteInPlace setup.py \ --replace '"pytest==5.2.1"' '"pytest"' \ --replace '"gunicorn==20.0.4"' '"gunicorn"' \ - --replace '"pytest-sanic",' "" + --replace '"pytest-sanic",' "" \ # Patch a request headers test to allow brotli encoding # (we build httpx with brotli support, upstream doesn't). substituteInPlace tests/test_headers.py \ @@ -26,25 +54,36 @@ buildPythonPackage rec { ''; propagatedBuildInputs = [ - sanic-routing httptools uvloop ujson aiofiles websockets multidict + aiofiles + httptools + multidict + sanic-routing + ujson + uvloop + websockets ]; checkInputs = [ - sanic-testing gunicorn pytestcov beautifulsoup4 pytest-sanic pytest-sugar - pytest-benchmark pytestCheckHook uvicorn + beautifulsoup4 + gunicorn + pytest-asyncio + pytest-benchmark + pytest-sanic + pytest-sugar + pytestCheckHook + sanic-testing + uvicorn ]; inherit doCheck; disabledTests = [ - # No "examples" directory in pypi distribution - "test_gunicorn" - "test_zero_downtime" - # flaky + # Tests are flaky "test_keep_alive_client_timeout" "test_check_timeouts_request_timeout" "test_check_timeouts_response_timeout" "test_reloader_live" + "test_zero_downtime" ]; __darwinAllowLocalNetworking = true; @@ -52,7 +91,7 @@ buildPythonPackage rec { pythonImportsCheck = [ "sanic" ]; meta = with lib; { - description = "A microframework based on uvloop, httptools, and learnings of flask"; + description = "Web server and web framework"; homepage = "https://github.com/sanic-org/sanic/"; license = licenses.mit; maintainers = with maintainers; [ costrouc AluisioASG ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sasmodels/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sasmodels/default.nix index 08c9e7ce3e..0e9b563f0f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sasmodels/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sasmodels/default.nix @@ -12,13 +12,13 @@ buildPythonPackage rec { pname = "sasmodels"; - version = "1.0.4"; + version = "1.0.5"; src = fetchFromGitHub { owner = "SasView"; repo = "sasmodels"; rev = "v${version}"; - sha256 = "0h2k81dm92sm0z086qy3ipw6y6cfgpb7ppl7lhjmx6816s3k50sa"; + sha256 = "19h30kcgpvg1qirzjm0vhgvp1yn60ivlglc8a8n2b4d9fp0acfyd"; }; buildInputs = [ opencl-headers ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/scancode-toolkit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/scancode-toolkit/default.nix index f27a2d40bf..fa7dabc272 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/scancode-toolkit/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/scancode-toolkit/default.nix @@ -37,12 +37,12 @@ }: buildPythonPackage rec { pname = "scancode-toolkit"; - version = "21.3.31"; + version = "21.6.7"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "7e0301031a302dedbb4304a91249534f3d036f84a119170b8a9fe70bd57cff95"; + sha256 = "056923ce556cd6d402e5cc98567cb0331a1b6349d03ec565f8ce1c9c37f3a783"; }; dontConfigure = true; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/schedule/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/schedule/default.nix index e6028d2c6c..55dc838780 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/schedule/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/schedule/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "schedule"; - version = "1.0.0"; + version = "1.1.0"; src = fetchPypi { inherit pname version; - sha256 = "1654cf70860a6d4d58236c98b0f1bb71521cc2a4bbf031b6cc39c96e77d59a91"; + sha256 = "e6ca13585e62c810e13a08682e0a6a8ad245372e376ba2b8679294f377dfc8e4"; }; buildInputs = [ mock ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/scikit-hep-testdata/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/scikit-hep-testdata/default.nix index 2815646011..7c3ca7a638 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/scikit-hep-testdata/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/scikit-hep-testdata/default.nix @@ -11,7 +11,7 @@ buildPythonPackage rec { pname = "scikit-hep-testdata"; - version = "0.4.3"; + version = "0.4.4"; format = "pyproject"; # fetch from github as we want the data files @@ -20,7 +20,7 @@ buildPythonPackage rec { owner = "scikit-hep"; repo = pname; rev = "v${version}"; - sha256 = "sha256-3uy2uZb0Y9nOHlXtsDd9LGALvTXl1ZQ6P3m2dQ2ceHo="; + sha256 = "1kd1nl62bydb2rk47ymh30l33jbaji3mb9zbvxlvxladrbqnxagp"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/scipy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/scipy/default.nix index 0bc8499a37..19fa8e5072 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/scipy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/scipy/default.nix @@ -1,24 +1,17 @@ -{lib, fetchPypi, python, buildPythonPackage, gfortran, nose, pytest, numpy, pybind11}: +{lib, fetchPypi, python, buildPythonPackage, gfortran, nose, pytest, pytest-xdist, numpy, pybind11 }: -let - pybind = pybind11.overridePythonAttrs(oldAttrs: { - cmakeFlags = oldAttrs.cmakeFlags ++ [ - "-DPYBIND11_TEST=off" - ]; - doCheck = false; # Circular test dependency - }); -in buildPythonPackage rec { +buildPythonPackage rec { pname = "scipy"; - version = "1.6.1"; + version = "1.6.3"; src = fetchPypi { inherit pname version; - sha256 = "048vd4c843xaq45yk3kn491gvqnvhp2i9rxhg671ddlh923fpz64"; + sha256 = "a75b014d3294fce26852a9d04ea27b5671d86736beb34acdfc05859246260707"; }; - checkInputs = [ nose pytest ]; + checkInputs = [ nose pytest pytest-xdist ]; nativeBuildInputs = [ gfortran ]; - buildInputs = [ numpy.blas pybind ]; + buildInputs = [ numpy.blas pybind11 ]; propagatedBuildInputs = [ numpy ]; # Remove tests because of broken wrapper @@ -40,7 +33,7 @@ in buildPythonPackage rec { checkPhase = '' runHook preCheck pushd dist - ${python.interpreter} -c 'import scipy; scipy.test("fast", verbose=10)' + ${python.interpreter} -c "import scipy; scipy.test('fast', verbose=10, parallel=$NIX_BUILD_CORES)" popd runHook postCheck ''; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/scp/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/scp/default.nix index abbe932c26..e0c6769b07 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/scp/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/scp/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "scp"; - version = "0.13.3"; + version = "0.13.4"; src = fetchPypi { inherit pname version; - sha256 = "8bd748293d7362073169b96ce4b8c4f93bcc62cfc5f7e1d949e01e406a025bd4"; + sha256 = "e60948dd3e1aa13da21aa1bf8a025fabbbc2816ed04f1a1272410247d1a86f15"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/scrapy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/scrapy/default.nix index 08a3a59673..4ca0731065 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/scrapy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/scrapy/default.nix @@ -1,64 +1,89 @@ { lib , stdenv -, buildPythonPackage -, isPy27 -, fetchPypi -, glibcLocales -, pytestCheckHook -, testfixtures -, pillow -, twisted -, cryptography -, w3lib -, lxml -, queuelib -, pyopenssl -, service-identity -, parsel -, pydispatcher -, cssselect -, zope_interface -, protego -, jmespath -, sybil -, pytest-twisted , botocore +, buildPythonPackage +, cryptography +, cssselect +, fetchFromGitHub +, fetchpatch +, glibcLocales +, installShellFiles , itemadapter , itemloaders +, jmespath +, lxml +, parsel +, pillow +, protego +, pydispatcher +, pyopenssl +, pytest-twisted +, pytestCheckHook +, pythonOlder +, queuelib +, service-identity +, sybil +, testfixtures +, twisted +, w3lib +, zope_interface }: buildPythonPackage rec { - version = "2.4.1"; - pname = "Scrapy"; + pname = "scrapy"; + version = "2.5.0"; + disabled = pythonOlder "3.6"; - disabled = isPy27; + src = fetchFromGitHub { + owner = pname; + repo = pname; + rev = version; + sha256 = "09lxnjz1cw37i9bgk8sci2xxknj20gi2lq8l7i0b3xw7q8bxzp7h"; + }; + + nativeBuildInputs = [ + installShellFiles + ]; + + propagatedBuildInputs = [ + cryptography + cssselect + itemadapter + itemloaders + lxml + parsel + protego + pydispatcher + pyopenssl + queuelib + service-identity + twisted + w3lib + zope_interface + ]; checkInputs = [ + botocore glibcLocales jmespath pytestCheckHook sybil testfixtures - pillow - pytest-twisted - botocore ]; - propagatedBuildInputs = [ - twisted - cryptography - cssselect - lxml - parsel - pydispatcher - pyopenssl - queuelib - service-identity - w3lib - zope_interface - protego - itemadapter - itemloaders + patches = [ + # Require setuptools, https://github.com/scrapy/scrapy/pull/5122 + (fetchpatch { + name = "add-setuptools.patch"; + url = "https://github.com/scrapy/scrapy/commit/4f500342c8ad4674b191e1fab0d1b2ac944d7d3e.patch"; + sha256 = "14030sfv1cf7dy4yww02b49mg39cfcg4bv7ys1iwycfqag3xcjda"; + }) + # Make Twisted[http2] installation optional, https://github.com/scrapy/scrapy/pull/5113 + (fetchpatch { + name = "remove-h2.patch"; + url = "https://github.com/scrapy/scrapy/commit/c5b1ee810167266fcd259f263dbfc0fe0204761a.patch"; + sha256 = "1gw28wg8qcb0al59rz214hm17smspi6j5kg62nr1r850pykyrsqk"; + }) ]; LC_ALL = "en_US.UTF-8"; @@ -68,39 +93,48 @@ buildPythonPackage rec { substituteInPlace pytest.ini --replace "--doctest-modules" "" ''; - pytestFlagsArray = [ - "--ignore=tests/test_proxy_connect.py" - "--ignore=tests/test_utils_display.py" - "--ignore=tests/test_command_check.py" + disabledTestPaths = [ + "tests/test_proxy_connect.py" + "tests/test_utils_display.py" + "tests/test_command_check.py" + # Don't test the documentation + "docs" ]; disabledTests = [ + # It's unclear if the failures are related to libxml2, https://github.com/NixOS/nixpkgs/pull/123890 + "test_nested_css" + "test_nested_xpath" + "test_flavor_detection" + # Requires network access "FTPFeedStorageTest" - "test_noconnect" - "test_retry_dns_error" + "FeedExportTest" "test_custom_asyncio_loop_enabled_true" "test_custom_loop_asyncio" + "test_custom_loop_asyncio_deferred_signal" "FileFeedStoragePreFeedOptionsTest" # https://github.com/scrapy/scrapy/issues/5157 ] ++ lib.optionals stdenv.isDarwin [ "test_xmliter_encoding" "test_download" ]; - src = fetchPypi { - inherit pname version; - sha256 = "68c48f01a58636bdf0f6fcd5035a19ecf277b58af24bd70c36dc6e556df3e005"; - }; - postInstall = '' - install -m 644 -D extras/scrapy.1 $out/share/man/man1/scrapy.1 + installManPage extras/scrapy.1 install -m 644 -D extras/scrapy_bash_completion $out/share/bash-completion/completions/scrapy install -m 644 -D extras/scrapy_zsh_completion $out/share/zsh/site-functions/_scrapy ''; + pythonImportsCheck = [ "scrapy" ]; + __darwinAllowLocalNetworking = true; meta = with lib; { - description = "A fast high-level web crawling and web scraping framework, used to crawl websites and extract structured data from their pages"; + description = "High-level web crawling and web scraping framework"; + longDescription = '' + Scrapy is a fast high-level web crawling and web scraping framework, used to crawl + websites and extract structured data from their pages. It can be used for a wide + range of purposes, from data mining to monitoring and automated testing. + ''; homepage = "https://scrapy.org/"; license = licenses.bsd3; maintainers = with maintainers; [ drewkett marsam ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/screenlogicpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/screenlogicpy/default.nix index 1713e4c252..c8e7a81df1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/screenlogicpy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/screenlogicpy/default.nix @@ -7,14 +7,14 @@ buildPythonPackage rec { pname = "screenlogicpy"; - version = "0.4.1"; + version = "0.4.2"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "dieselrabbit"; repo = pname; rev = "v${version}"; - sha256 = "1rmjxqqbkfcv2xz8ilml799bzffls678fvq784fab2xdv595fndd"; + sha256 = "158y34d140bh93l143plq53l7n7mcnmqi5mj7hj0j1ljccxpjcnj"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/secp256k1/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/secp256k1/default.nix index 78ddb269f3..bb5cc138a7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/secp256k1/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/secp256k1/default.nix @@ -44,6 +44,6 @@ buildPythonPackage rec { homepage = "https://github.com/ludbb/secp256k1-py"; description = "Python FFI bindings for secp256k1"; license = with lib.licenses; [ mit ]; - maintainers = with lib.maintainers; [ chris-martin ]; + maintainers = with lib.maintainers; [ ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/secure/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/secure/default.nix index 49fcb52a15..890d022f1a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/secure/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/secure/default.nix @@ -4,15 +4,15 @@ }: buildPythonPackage rec { - version = "0.2.1"; + version = "0.3.0"; pname = "secure"; disabled = isPy27; src = fetchFromGitHub { owner = "typeerror"; repo = "secure.py"; - rev = "v${version}"; - sha256 = "1nbxwi0zccrha6js14ibd596kdi1wpqr7jgs442mqclw4b3f77q5"; + rev = version; + sha256 = "1ajz1nx0nnhsc80xbgbc42ib2h08qnccvsp5i583rd9b0f9pklwk"; }; propagatedBuildInputs = [ maya requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/selectors34/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/selectors34/default.nix deleted file mode 100644 index 2209ccf43d..0000000000 --- a/third_party/nixpkgs/pkgs/development/python-modules/selectors34/default.nix +++ /dev/null @@ -1,29 +0,0 @@ -{ lib -, buildPythonPackage -, fetchPypi -, python -, six -}: - -buildPythonPackage rec { - pname = "selectors34"; - version = "1.2"; - - src = fetchPypi { - inherit pname version; - sha256 = "09f5066337f8a76fb5233f267873f89a27a17c10bf79575954894bb71686451c"; - }; - - propagatedBuildInputs = [ six ]; - - checkPhase = '' - ${python.interpreter} setup.py test - ''; - - meta = with lib; { - description = "A backport of the selectors module from Python 3.4"; - homepage = "https://github.com/berkerpeksag/selectors34"; - license = licenses.psfl; - maintainers = with maintainers; [ prusnak ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sendgrid/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sendgrid/default.nix index 9119836910..34ef235590 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sendgrid/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sendgrid/default.nix @@ -11,13 +11,13 @@ buildPythonPackage rec { pname = "sendgrid"; - version = "6.7.0"; + version = "6.7.1"; src = fetchFromGitHub { owner = pname; repo = "sendgrid-python"; rev = version; - sha256 = "sha256-Y0h5Aiu85/EWCmSc+eCtK6ZaPuu/LYZiwhXOx0XhfwQ="; + sha256 = "0g9yifv3p3zbcxbcdyg4p9k3vwvaq0vym40j3yrv534m4qbynwhk"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sense-energy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sense-energy/default.nix new file mode 100644 index 0000000000..a3cd63d485 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/sense-energy/default.nix @@ -0,0 +1,39 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, aiohttp +, requests +, websocket-client +, websockets +}: + +buildPythonPackage rec { + pname = "sense-energy"; + version = "0.9.0"; + + src = fetchFromGitHub { + owner = "scottbonline"; + repo = "sense"; + rev = version; + sha256 = "1lbarsa9wpm7hnhgf2g253w0gs80cn989dnj4aqmic57x5isikhz"; + }; + + propagatedBuildInputs = [ + aiohttp + requests + websocket-client + websockets + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "sense_energy" ]; + + meta = with lib; { + description = "API for the Sense Energy Monitor"; + homepage = "https://github.com/scottbonline/sense"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/serpent/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/serpent/default.nix index 50f6e0b63a..12abfba056 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/serpent/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/serpent/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "serpent"; - version = "1.30.2"; + version = "1.40"; src = fetchPypi { inherit pname version; - sha256 = "72753820246a7d8486e8b385353e3bbf769abfceec2e850fa527a288b084ff7a"; + sha256 = "10b34e7f8e3207ee6fb70dcdc9bce473851ee3daf0b47c58aec1b48032ac11ce"; }; propagatedBuildInputs = lib.optionals isPy27 [ enum34 ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sh/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sh/default.nix index 964512460b..c8da91750f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sh/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sh/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "sh"; - version = "1.14.1"; + version = "1.14.2"; src = fetchPypi { inherit pname version; - sha256 = "39aa9af22f6558a0c5d132881cf43e34828ca03e4ae11114852ca6a55c7c1d8e"; + sha256 = "9d7bd0334d494b2a4609fe521b2107438cdb21c0e469ffeeb191489883d6fe0d"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/shamir-mnemonic/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/shamir-mnemonic/default.nix index ceb3b9abcd..74ca2228d8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/shamir-mnemonic/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/shamir-mnemonic/default.nix @@ -21,6 +21,11 @@ buildPythonPackage rec { sha256 = "1mi1n01yw8yycbiv1l0xnfzlhhq2arappyvyi2jm5yq65jln77kg"; }; + postPatch = '' + substituteInPlace setup.py \ + --replace "click>=7,<8" "click" + ''; + propagatedBuildInputs = [ attrs click diff --git a/third_party/nixpkgs/pkgs/development/python-modules/simber/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/simber/default.nix new file mode 100644 index 0000000000..d1471286bb --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/simber/default.nix @@ -0,0 +1,25 @@ +{ lib, buildPythonPackage, fetchFromGitHub, colorama, pytestCheckHook }: + +buildPythonPackage rec { + pname = "simber"; + version = "0.2.2"; + + src = fetchFromGitHub { + owner = "deepjyoti30"; + repo = pname; + rev = version; + sha256 = "0ksc2m61j5ijj0sq6kkc0hhkmfy9f51h9z3cl2sf8g6wbr9vc47h"; + }; + + propagatedBuildInputs = [ colorama ]; + + checkInputs = [ pytestCheckHook ]; + pythonImportsCheck = [ "simber" ]; + + meta = with lib; { + description = "Simple, minimal and powerful logger for Python"; + homepage = "https://github.com/deepjyoti30/simber"; + license = licenses.mit; + maintainers = with maintainers; [ j0hax ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/simple-salesforce/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/simple-salesforce/default.nix index af92f34595..592e235780 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/simple-salesforce/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/simple-salesforce/default.nix @@ -12,13 +12,13 @@ buildPythonPackage rec { pname = "simple-salesforce"; - version = "1.11.0"; + version = "1.11.2"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "16c34xnqa1xkdfjbxx0q584zb6aqci2z6j4211hmzjqs74ddvysm"; + sha256 = "1xysym0b1qnxck4hbj5d0l5wapwfahmkr280f6iskz2hi5j2j1yb"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/simpleaudio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/simpleaudio/default.nix index 948716a9b7..4ab18efe33 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/simpleaudio/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/simpleaudio/default.nix @@ -1,4 +1,4 @@ -{ alsaLib, buildPythonPackage, fetchFromGitHub, isPy27, lib }: +{ alsa-lib, buildPythonPackage, fetchFromGitHub, isPy27, lib }: buildPythonPackage rec { pname = "simpleaudio"; @@ -12,7 +12,7 @@ buildPythonPackage rec { sha256 = "12nypzb1m14yip4zrbzin5jc5awyp1d5md5y40g5anj4phb4hx1i"; }; - buildInputs = [ alsaLib ]; + buildInputs = [ alsa-lib ]; meta = with lib; { homepage = "https://github.com/hamiltron/py-simple-audio"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/simplisafe-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/simplisafe-python/default.nix index 9592d37fed..3e2a90b496 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/simplisafe-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/simplisafe-python/default.nix @@ -6,45 +6,37 @@ , fetchFromGitHub , poetry-core , pytest-asyncio -, pytest-cov , pytestCheckHook -, python-engineio -, python-socketio , pythonOlder , pytz , voluptuous -, websockets }: buildPythonPackage rec { pname = "simplisafe-python"; - version = "9.6.10"; + version = "10.0.0"; format = "pyproject"; - disabled = pythonOlder "3.6"; + disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "bachya"; repo = pname; rev = version; - sha256 = "0cc5kxxishxhkg1nqmgbh36yxs8yjfynmimzjnaqkqfrs9iq46mr"; + sha256 = "sha256-VF8R+dty54GuWvYs/OqWhfGtOVieuxtfndQUxHhu5lc="; }; nativeBuildInputs = [ poetry-core ]; propagatedBuildInputs = [ aiohttp - python-engineio - python-socketio pytz voluptuous - websockets ]; checkInputs = [ aresponses asynctest pytest-asyncio - pytest-cov pytestCheckHook ]; @@ -52,6 +44,8 @@ buildPythonPackage rec { pythonImportsCheck = [ "simplipy" ]; + __darwinAllowLocalNetworking = true; + meta = with lib; { description = "Python library the SimpliSafe API"; homepage = "https://simplisafe-python.readthedocs.io/"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/singledispatch/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/singledispatch/default.nix index 0a9b2353bf..8fa62e835f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/singledispatch/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/singledispatch/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "singledispatch"; - version = "3.6.1"; + version = "3.6.2"; src = fetchPypi { inherit pname version; - sha256 = "58b46ce1cc4d43af0aac3ac9a047bdb0f44e05f0b2fa2eec755863331700c865"; + sha256 = "d5bb9405a4b8de48e36709238e8b91b4f6f300f81a5132ba2531a9a738eca391"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sip/4.x.nix b/third_party/nixpkgs/pkgs/development/python-modules/sip/4.x.nix index 5334d11963..5f6a3a5f82 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sip/4.x.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sip/4.x.nix @@ -36,7 +36,7 @@ buildPythonPackage rec { meta = with lib; { description = "Creates C++ bindings for Python modules"; - homepage = "http://www.riverbankcomputing.co.uk/"; + homepage = "https://riverbankcomputing.com/"; license = licenses.gpl2Plus; maintainers = with maintainers; [ lovek323 sander ]; platforms = platforms.all; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sip/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sip/default.nix index c15589b77b..b3945696b7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sip/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sip/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "sip"; - version = "5.5.0"; + version = "6.1.1"; src = fetchPypi { pname = "sip"; inherit version; - sha256 = "1idaivamp1jvbbai9yzv471c62xbqxhaawccvskaizihkd0lq0jx"; + sha256 = "083ykzg7zbvrfrg3ram2vx93zrmhpm817kf9bkhw8r6pzkr5mljj"; }; propagatedBuildInputs = [ packaging toml ]; @@ -33,7 +33,7 @@ buildPythonPackage rec { meta = with lib; { description = "Creates C++ bindings for Python modules"; - homepage = "http://www.riverbankcomputing.co.uk/"; + homepage = "https://riverbankcomputing.com/"; license = licenses.gpl3Only; maintainers = with maintainers; [ eduardosm ]; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sipsimple/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sipsimple/default.nix index 568ce67d14..838ffd4718 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sipsimple/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sipsimple/default.nix @@ -33,7 +33,7 @@ buildPythonPackage rec { ''; nativeBuildInputs = [ pkgs.pkg-config ]; - buildInputs = with pkgs; [ alsaLib ffmpeg_3 libv4l sqlite libvpx ]; + buildInputs = with pkgs; [ alsa-lib ffmpeg_3 libv4l sqlite libvpx ]; propagatedBuildInputs = [ cython pkgs.openssl dnspython dateutil xcaplib msrplib lxml python-otr ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/six/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/six/default.nix index 8d8cd790cd..24fe639211 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/six/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/six/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "six"; - version = "1.15.0"; + version = "1.16.0"; src = fetchPypi { inherit pname version; - sha256 = "30639c035cdb23534cd4aa2dd52c3bf48f06e5f4a941509c8bafd8ce11080259"; + sha256 = "1e61c37477a1626458e36f7b1d82aa5c9b094fa4802892072e49de9c60c4c926"; }; checkInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/skytemple-dtef/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/skytemple-dtef/default.nix index 80bebd5569..c1a950dc2a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/skytemple-dtef/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/skytemple-dtef/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "skytemple-dtef"; - version = "1.1.2"; + version = "1.1.3"; src = fetchFromGitHub { owner = "SkyTemple"; repo = pname; rev = version; - sha256 = "177ydif01fai6z5yhgpa27pzfgabblzhl8nsczczcmw74vxqwzyc"; + sha256 = "0hisg7gq6ph0as9vvx2p1h104bn6x2kx8y477p9zcqc71f3yrx82"; }; propagatedBuildInputs = [ skytemple-files ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/skytemple-files/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/skytemple-files/default.nix index cb03d73b42..0df6419b52 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/skytemple-files/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/skytemple-files/default.nix @@ -1,4 +1,4 @@ -{ lib, buildPythonPackage, fetchFromGitHub, appdirs, explorerscript, ndspy, pillow, setuptools, skytemple-rust, tilequant }: +{ lib, buildPythonPackage, fetchFromGitHub, appdirs, explorerscript, ndspy, pillow, setuptools, skytemple-rust, tilequant, armips, fetchpatch }: buildPythonPackage rec { pname = "skytemple-files"; @@ -8,9 +8,26 @@ buildPythonPackage rec { owner = "SkyTemple"; repo = pname; rev = version; - sha256 = "1vklg4kcj3kb9ryrzrcmywn131b2bp3vy94cd4x4y4s7hkhgwg74"; + sha256 = "sha256-/S0otBujwO/IMiLKgA2o8wlD6xk1/DpwOAfemojV9NU="; + fetchSubmodules = true; }; + patches = [ + # fix patching https://github.com/SkyTemple/skytemple-files/pull/128 + # merged, remove for next update + (fetchpatch { + url = "http://github.com/SkyTemple/skytemple-files/commit/71dd71e6abb7435405e30225e8a37592b990d692.patch"; + sha256 = "sha256-CSBaT+LVP9J0C1FlUCduTJroq9z2EAJG6lruvlHlQLI="; + }) + ]; + + postPatch = '' + substituteInPlace skytemple_files/patch/arm_patcher.py \ + --replace "exec_name = os.getenv('SKYTEMPLE_ARMIPS_EXEC', f'{prefix}armips')" "exec_name = \"${armips}/bin/armips\"" + ''; + + buildInputs = [ armips ]; + propagatedBuildInputs = [ appdirs explorerscript ndspy pillow setuptools skytemple-rust tilequant ]; doCheck = false; # requires Pokémon Mystery Dungeon ROM @@ -20,6 +37,6 @@ buildPythonPackage rec { homepage = "https://github.com/SkyTemple/skytemple-files"; description = "Python library to edit the ROM of Pokémon Mystery Dungeon Explorers of Sky"; license = licenses.gpl3Plus; - maintainers = with maintainers; [ xfix ]; + maintainers = with maintainers; [ xfix marius851000 ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/slack-sdk/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/slack-sdk/default.nix index 9044ce19b5..862789ce56 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/slack-sdk/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/slack-sdk/default.nix @@ -15,20 +15,20 @@ , pytestCheckHook , pytestrunner , sqlalchemy -, websocket_client +, websocket-client , websockets }: buildPythonPackage rec { pname = "slack-sdk"; - version = "3.5.0"; + version = "3.7.0"; disabled = !isPy3k; src = fetchFromGitHub { owner = "slackapi"; repo = "python-slack-sdk"; rev = "v${version}"; - sha256 = "sha256-5ZBaF/6p/eOWjAmo+IlF9zCb9xBr2bP6suPZblRogUg="; + sha256 = "0bc52v5n8r3b2fy1c90w253r1abl752kaqdk6bgzkwsvbhgcxf2s"; }; propagatedBuildInputs = [ @@ -36,7 +36,7 @@ buildPythonPackage rec { aiohttp boto3 sqlalchemy - websocket_client + websocket-client websockets ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/slackclient/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/slackclient/default.nix index cf7b161261..e96161228a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/slackclient/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/slackclient/default.nix @@ -14,7 +14,7 @@ , requests , responses , six -, websocket_client +, websocket-client }: buildPythonPackage rec { @@ -32,7 +32,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ aiohttp - websocket_client + websocket-client requests six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sleekxmpp/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sleekxmpp/default.nix index 07be197f27..d93d1174de 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sleekxmpp/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sleekxmpp/default.nix @@ -1,10 +1,10 @@ -{ lib, fetchPypi, buildPythonPackage, dns, pyasn1 }: +{ lib, fetchPypi, buildPythonPackage, dnspython, pyasn1 }: buildPythonPackage rec { pname = "sleekxmpp"; version = "1.3.3"; - propagatedBuildInputs = [ dns pyasn1 ]; + propagatedBuildInputs = [ dnspython pyasn1 ]; patches = [ ./dnspython-ip6.patch diff --git a/third_party/nixpkgs/pkgs/development/python-modules/slither-analyzer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/slither-analyzer/default.nix index 57168b1d91..a4f907a1aa 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/slither-analyzer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/slither-analyzer/default.nix @@ -14,12 +14,12 @@ buildPythonPackage rec { pname = "slither-analyzer"; - version = "0.7.1"; + version = "0.8.0"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-v/UuxxgMmkGfP962AfOQU05MI8xJocpD8SkENCZi04I="; + sha256 = "0b8a2e2145daefd9443ffa43639608203532e78a858af99c4c52c2b128ca681f"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/smbprotocol/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/smbprotocol/default.nix new file mode 100644 index 0000000000..517acd6f9c --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/smbprotocol/default.nix @@ -0,0 +1,43 @@ +{ lib +, buildPythonPackage +, cryptography +, fetchFromGitHub +, pyspnego +, pytest-mock +, pytestCheckHook +, pythonOlder +, six +}: + +buildPythonPackage rec { + pname = "smbprotocol"; + version = "1.5.1"; + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "jborean93"; + repo = pname; + rev = "v${version}"; + sha256 = "1ym0fvljbwgl1h7f63m3psbsvqm64fipsrrmbqb97hrhfdzxqxpa"; + }; + + propagatedBuildInputs = [ + cryptography + pyspnego + six + ]; + + checkInputs = [ + pytest-mock + pytestCheckHook + ]; + + pythonImportsCheck = [ "smbprotocol" ]; + + meta = with lib; { + description = "Python SMBv2 and v3 Client"; + homepage = "https://github.com/jborean93/smbprotocol"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/snitun/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/snitun/default.nix index f93445a02b..f09876eadb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/snitun/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/snitun/default.nix @@ -1,21 +1,35 @@ -{ lib, stdenv, buildPythonPackage, python, fetchFromGitHub -, attrs, cryptography, async-timeout, pytest-aiohttp, pytestCheckHook +{ lib +, stdenv +, async-timeout +, attrs +, buildPythonPackage +, cryptography +, fetchFromGitHub +, pytest-aiohttp +, pytestCheckHook }: buildPythonPackage rec { pname = "snitun"; - version = "0.21.0"; + version = "0.27.0"; src = fetchFromGitHub { owner = "NabuCasa"; repo = pname; rev = version; - sha256 = "sha256-oZHi/H9HOqGTFuhqPSZXntMzVJ3ZT4zNejezo0cDtqg="; + sha256 = "sha256-vx9F+Nat69Yadd+YpsnBCstnxCEICFJI14TdG6PvstI="; }; - propagatedBuildInputs = [ attrs cryptography async-timeout ]; + propagatedBuildInputs = [ + async-timeout + attrs + cryptography + ]; - checkInputs = [ pytestCheckHook pytest-aiohttp ]; + checkInputs = [ + pytest-aiohttp + pytestCheckHook + ]; disabledTests = lib.optionals stdenv.isDarwin [ "test_multiplexer_data_channel_abort_full" # https://github.com/NabuCasa/snitun/issues/61 @@ -26,10 +40,13 @@ buildPythonPackage rec { "test_peer_listener_timeout" ]; + pythonImportsCheck = [ "snitun" ]; + meta = with lib; { homepage = "https://github.com/nabucasa/snitun"; description = "SNI proxy with TCP multiplexer"; - license = licenses.gpl3; + license = licenses.gpl3Only; maintainers = with maintainers; [ Scriptkiddi ]; + platforms = platforms.linux; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/snowflake-connector-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/snowflake-connector-python/default.nix index 237f36e201..0007b4380b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/snowflake-connector-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/snowflake-connector-python/default.nix @@ -25,12 +25,12 @@ buildPythonPackage rec { pname = "snowflake-connector-python"; - version = "2.4.3"; + version = "2.4.5"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-+jAfUwaofWM5Ef1kk4AEAbBM/UES8/ZzLd4QJfkEQsM="; + sha256 = "f5bd11228e192b4754587869ebd85752327ecb945fcc19c2ed1f66958443ad08"; }; propagatedBuildInputs = [ @@ -58,6 +58,7 @@ buildPythonPackage rec { # https://github.com/snowflakedb/snowflake-connector-python/issues/705 substituteInPlace setup.py \ --replace "idna>=2.5,<3" "idna" \ + --replace "certifi<2021.0.0" "certifi" \ --replace "chardet>=3.0.2,<4" "chardet" ''; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/soco/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/soco/default.nix index c1db4dd015..edadde8995 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/soco/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/soco/default.nix @@ -14,14 +14,14 @@ buildPythonPackage rec { pname = "soco"; - version = "0.22.3"; + version = "0.22.6"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "SoCo"; repo = "SoCo"; rev = "v${version}"; - sha256 = "sha256-RCWXXk5aQQYqyxm65M96XBoMS5UlYqyAz3aM/DVghRw="; + sha256 = "06qar4syi6g3x84klnk0mg6w5ryl50c5k3s1hag4rimbkap3x6ks"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/somecomfort/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/somecomfort/default.nix new file mode 100644 index 0000000000..c5f1ad73fc --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/somecomfort/default.nix @@ -0,0 +1,33 @@ +{ lib +, buildPythonPackage +, fetchPypi +, prettytable +, requests +}: + +buildPythonPackage rec { + pname = "somecomfort"; + version = "0.5.2"; + + src = fetchPypi { + inherit pname version; + sha256 = "681f44449e8c0a923305aa05aa5262f4d2304a6ecea496caa8d5a51b724a0fef"; + }; + + propagatedBuildInputs = [ + requests + prettytable + ]; + + # tests require network access + doCheck = false; + + pythonImportsCheck = [ "somecomfort" ]; + + meta = with lib; { + description = "Client for Honeywell's US-based cloud devices"; + homepage = "https://github.com/kk7ds/somecomfort"; + license = licenses.gpl3Only; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sopel/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sopel/default.nix index b7569efadf..f74fa560ad 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sopel/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sopel/default.nix @@ -13,12 +13,12 @@ buildPythonPackage rec { pname = "sopel"; - version = "7.0.7"; + version = "7.1.0"; disabled = isPyPy; src = fetchPypi { inherit pname version; - sha256 = "84d42708d176aecfb7b95299af0e484896f5f80df61f43c92d8e7a53de0b2099"; + sha256 = "74057d4c86cff744b1f1062f3a9c4ae99eb4f1b17048ceb083293d5f4c7e989b"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sortedcontainers/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sortedcontainers/default.nix index 3f4a684067..8920336f8d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sortedcontainers/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sortedcontainers/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "sortedcontainers"; - version = "2.3.0"; + version = "2.4.0"; src = fetchPypi { inherit pname version; - sha256 = "59cc937650cf60d677c16775597c89a960658a09cf7c1a668f86e1e4464b10a1"; + sha256 = "25caa5a06cc30b6b83d11423433f65d1f9d76c4c6a0c90e3379eaa43b9bfdb88"; }; # pypi tarball does not come with tests diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sphinx/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sphinx/default.nix index 5e31b6b19f..d37ccd3e44 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sphinx/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sphinx/default.nix @@ -29,14 +29,14 @@ buildPythonPackage rec { pname = "sphinx"; - version = "3.5.4"; + version = "4.0.2"; disabled = pythonOlder "3.5"; src = fetchFromGitHub { owner = "sphinx-doc"; repo = pname; rev = "v${version}"; - sha256 = "1xjii3dl01rq8x2bsxc6zywiy1s7arfgxrg5l8ml54w1748shadd"; + sha256 = "sha256-0QdgHFX4r40BDHjpi9R40lXqT4n5ZgrIny+w070LZPE="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sphinx_rtd_theme/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sphinx_rtd_theme/default.nix index 06338ec118..f5ec90755c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sphinx_rtd_theme/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sphinx_rtd_theme/default.nix @@ -1,29 +1,41 @@ { lib , buildPythonPackage , fetchPypi +, docutils , sphinx , readthedocs-sphinx-ext -, pytest +, pytestCheckHook }: buildPythonPackage rec { pname = "sphinx_rtd_theme"; - version = "0.5.1"; + version = "0.5.2"; src = fetchPypi { inherit pname version; - sha256 = "19c31qhfiqbm6y7mamglrc2mc7l6n4lasb8jry01lc67l3nqk9pd"; + sha256 = "32bd3b5d13dc8186d7a42fc816a23d32e83a4827d7d9882948e7b837c232da5a"; }; - propagatedBuildInputs = [ sphinx ]; - - checkInputs = [ readthedocs-sphinx-ext pytest ]; - CI=1; # Don't use NPM to fetch assets. Assets are included in sdist. - - checkPhase = '' - py.test + postPatch = '' + substituteInPlace setup.py \ + --replace "docutils<0.17" "docutils" ''; + preBuild = '' + # Don't use NPM to fetch assets. Assets are included in sdist. + export CI=1 + ''; + + propagatedBuildInputs = [ + docutils + sphinx + ]; + + checkInputs = [ + readthedocs-sphinx-ext + pytestCheckHook + ]; + meta = with lib; { description = "ReadTheDocs.org theme for Sphinx"; homepage = "https://github.com/readthedocs/sphinx_rtd_theme"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-autoapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-autoapi/default.nix index c60d99d5e6..484b692f69 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-autoapi/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-autoapi/default.nix @@ -13,12 +13,12 @@ buildPythonPackage rec { pname = "sphinx-autoapi"; - version = "1.7.0"; + version = "1.8.1"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "48caa054a99c21156e9a1d26559281dc27f86ab8ef8bb6ef160f8cd9f4a0053d"; + sha256 = "842c0a8f49c824803f7edee31cb1cabd5001a987553bec7b4681283ec9e47d4a"; }; propagatedBuildInputs = [ astroid jinja2 pyyaml sphinx unidecode ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-bibtex/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-bibtex/default.nix index b31c79c3f7..5930c7e71b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-bibtex/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-bibtex/default.nix @@ -9,14 +9,14 @@ }: buildPythonPackage rec { - version = "2.2.0"; + version = "2.3.0"; pname = "sphinxcontrib-bibtex"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "7500843e154d76983c23bca5ca7380965e0725c46b8f484c1322d0b58a6ce3b2"; + sha256 = "1aae1005935ae8e6499750b4ef1c8251a14ba16e025d0c0154fe2b6bf45defc0"; }; propagatedBuildInputs = [ oset pybtex pybtex-docutils sphinx ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-katex/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-katex/default.nix index 6fcafd438b..dd38d8110f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-katex/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-katex/default.nix @@ -2,7 +2,7 @@ buildPythonPackage rec { pname = "sphinxcontrib-katex"; - version = "0.7.1"; + version = "0.8.6"; # pkgutil namespaces are broken in nixpkgs (because they can't scan multiple # directories). But python2 is EOL, so not supporting it should be ok. @@ -10,7 +10,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "fa80aba8af9d78f70a0a255815d44e33e8aca8e806ca6101e0eb18b2b7243246"; + sha256 = "c3dcdb2984626a0e6c1b11bc2580c7bbc6ab3711879b23bbf26c028a0f4fd4f2"; }; propagatedBuildInputs = [ sphinx ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-serializinghtml/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-serializinghtml/default.nix index b898e9cb67..a238c0191a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-serializinghtml/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-serializinghtml/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "sphinxcontrib-serializinghtml"; - version = "1.1.4"; + version = "1.1.5"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "eaa0eccc86e982a9b939b2b82d12cc5d013385ba5eadcc7e4fed23f4405f77bc"; + sha256 = "aa5f6de5dfdf809ef505c4895e51ef5c9eac17d0f287933eb49ec495280b6952"; }; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-spelling/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-spelling/default.nix index 35b7cf38aa..51885c4b7f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-spelling/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-spelling/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "sphinxcontrib-spelling"; - version = "7.1.0"; + version = "7.2.1"; src = fetchPypi { inherit pname version; - sha256 = "5b4240808a6d21eab9c49e69ad5ac0cb3efb03fe2e94763d23c860f85ec6a799"; + sha256 = "f2578653014931b32c8c30d1a9930d998ae053b0d8b7adfbea0eb95a63e7a737"; }; propagatedBuildInputs = [ sphinx pyenchant pbr ] diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-tikz/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-tikz/default.nix index facd37e9c3..19f386d7d2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-tikz/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib-tikz/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "sphinxcontrib-tikz"; - version = "0.4.11"; + version = "0.4.13"; src = fetchPypi { inherit pname version; - sha256 = "5c5194055d3219e2ed8d02b52b664d399674154f3db9724ae09e881d091b3d10"; + sha256 = "882e3ccfa202559bf77b90c93ee5eb13ec50cdd7714b3673dc6580dea7236740"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib_plantuml/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib_plantuml/default.nix index 51fd34803d..473a625ae6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib_plantuml/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sphinxcontrib_plantuml/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "sphinxcontrib-plantuml"; - version = "0.20"; + version = "0.21"; src = fetchPypi { inherit pname version; - sha256 = "041d8f79599522949eda129146a60955d0b7544963790411106fff6f9f3daab4"; + sha256 = "53e1808dc2b1f3ec20c177fa3fa6d438d75ef572a25a489e330bb01130508d87"; }; # No tests included. diff --git a/third_party/nixpkgs/pkgs/development/python-modules/spiderpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/spiderpy/default.nix new file mode 100644 index 0000000000..166f821fb3 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/spiderpy/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, isPy27 +, fetchFromGitHub +, requests +}: + +buildPythonPackage rec { + pname = "spiderpy"; + version = "1.5.0"; + + disabled = isPy27; + + src = fetchFromGitHub { + owner = "peternijssen"; + repo = "spiderpy"; + rev = version; + sha256 = "1nbfjqwiyyl7lhkb4rvickxiy9nwynr2sxr1hpyv0vm09h6q8hsc"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # no unit tests implemented + doCheck = false; + + pythonImportsCheck = [ "spiderpy.spiderapi" ]; + + meta = with lib; { + description = "Unofficial Python wrapper for the Spider API"; + homepage = "https://www.github.com/peternijssen/spiderpy"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/spyder-kernels/0.x.nix b/third_party/nixpkgs/pkgs/development/python-modules/spyder-kernels/0.x.nix deleted file mode 100644 index 43a2f5b460..0000000000 --- a/third_party/nixpkgs/pkgs/development/python-modules/spyder-kernels/0.x.nix +++ /dev/null @@ -1,72 +0,0 @@ -{ lib -, buildPythonPackage -, fetchFromGitHub -, cloudpickle -, ipykernel -, wurlitzer -, jupyter_client -, pyzmq -, numpy -, pandas -, scipy -, matplotlib -, xarray -, pytestCheckHook -, flaky -, isPy3k -}: - -buildPythonPackage rec { - pname = "spyder-kernels"; - version = "0.5.2"; - - src = fetchFromGitHub { - owner = "spyder-ide"; - repo = "spyder-kernels"; - rev = "v${version}"; - sha256 = "1yan589g0470y61bcyjy3wj13i94ndyffckqdyrg97vw2qhfrisb"; - }; - - # requirement xarray not available on Py2k - disabled = !isPy3k; - - propagatedBuildInputs = [ - cloudpickle - ipykernel - wurlitzer - jupyter_client - pyzmq - ]; - - checkInputs = [ - numpy - pandas - scipy - matplotlib - xarray - pytestCheckHook - flaky - ]; - - preCheck = '' - export JUPYTER_RUNTIME_DIR=$(mktemp -d) - ''; - - # skipped tests: - # turtle requires graphics - # cython test fails, I don't think this can ever access cython? - # umr pathlist test assumes standard directories, not compatible with nix - disabledTests = [ - "test_turtle_launc" - "test_umr_skip_cython" - "test_umr_pathlist" - "test_user_sitepackages_in_pathlist" - ]; - - meta = with lib; { - description = "Jupyter kernels for Spyder's console"; - homepage = "https://github.com/spyder-ide/spyder-kernels"; - license = licenses.mit; - maintainers = with maintainers; [ gebner marcus7070 ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/spyder-kernels/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/spyder-kernels/default.nix index 410e1ad061..fa29236563 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/spyder-kernels/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/spyder-kernels/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "spyder-kernels"; - version = "1.10.2"; + version = "1.10.3"; src = fetchPypi { inherit pname version; - sha256 = "a507397f5ff0426cff50f1b67996b191bdc8148583aa565f5dffd3d0111c0262"; + sha256 = "cecb0ca0115a42bab864c199a737c859a8534a510fc7edfa33dc42abcbb5287f"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/spyder/3.nix b/third_party/nixpkgs/pkgs/development/python-modules/spyder/3.nix deleted file mode 100644 index 2618ccfcd8..0000000000 --- a/third_party/nixpkgs/pkgs/development/python-modules/spyder/3.nix +++ /dev/null @@ -1,48 +0,0 @@ -{ lib, buildPythonPackage, fetchFromGitHub, jedi, pycodestyle, - psutil, pyflakes, rope, pylint, keyring, numpydoc, - qtconsole, qtawesome, nbconvert, mccabe, pyopengl, cloudpickle, pygments, - spyder-kernels_0_5, qtpy, pyzmq, chardet, pyqtwebengine -}: - -buildPythonPackage rec { - pname = "spyder"; - version = "3.3.6"; - - src = fetchFromGitHub { - owner = "spyder-ide"; - repo = "spyder"; - rev = "v3.3.6"; - sha256 = "1sk9xajhzpklk5bcbdhpfhx3gxhyrahsmj9bv2m6kvbqxdlx6bq6"; - }; - - propagatedBuildInputs = [ - jedi pycodestyle psutil pyflakes rope pylint keyring numpydoc - qtconsole qtawesome nbconvert mccabe pyopengl cloudpickle spyder-kernels_0_5 - pygments qtpy pyzmq chardet pyqtwebengine - ]; - - # tests fail with a segfault - doCheck = false; - - postPatch = '' - # remove dependency on pyqtwebengine - # this is still part of the pyqt 5.13 version we have in nixpkgs - sed -i /pyqtwebengine/d setup.py - substituteInPlace setup.py --replace "pyqt5<5.13" "pyqt5" - ''; - - pythonImportsCheck = [ "spyder" ]; - - meta = with lib; { - description = "Library providing a scientific python development environment"; - longDescription = '' - Spyder (previously known as Pydee) is a powerful interactive development - environment for the Python language with advanced editing, interactive - testing, debugging and introspection features. - ''; - homepage = "https://github.com/spyder-ide/spyder/"; - license = licenses.mit; - platforms = platforms.linux; - maintainers = with maintainers; [ gebner marcus7070 ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/spyder/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/spyder/default.nix index 12dd743751..5aaf4cb4a7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/spyder/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/spyder/default.nix @@ -8,13 +8,13 @@ buildPythonPackage rec { pname = "spyder"; - version = "4.2.4"; + version = "4.2.5"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "ec3a6949a3210f7a35142ddd0e8ec529bdd382ae0cae9d1537f2009f557214c8"; + sha256 = "03159003f6ea51458e10000091e65e77888b095dba48e64ca2b36c75a648580c"; }; nativeBuildInputs = [ pyqtwebengine.wrapQtAppsHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-i18n/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-i18n/default.nix index 84be4587e6..b3038c5d24 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-i18n/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-i18n/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "SQLAlchemy-i18n"; - version = "1.0.3"; + version = "1.1.0"; src = fetchPypi { inherit pname version; - sha256 = "15xah8643p29kciz365ixs9pbsflj92pzr2d9anbdh2biyf4cka8"; + sha256 = "de33376483a581ca14218d8f57a114466c5f72b674a95839b6c4564a6e67796f"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-imageattach/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-imageattach/default.nix index 15ac7dc3a5..55026b2b55 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-imageattach/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-imageattach/default.nix @@ -36,6 +36,7 @@ buildPythonPackage rec { homepage = "https://github.com/dahlia/sqlalchemy-imageattach"; description = "SQLAlchemy extension for attaching images to entity objects"; license = licenses.mit; + broken = true; # Incompatible with sqlalchemy>=1.4 (https://github.com/dahlia/sqlalchemy-imageattach/issues/47) }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-utils/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-utils/default.nix index 657ec7ac07..b59209f429 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-utils/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy-utils/default.nix @@ -5,12 +5,12 @@ buildPythonPackage rec { pname = "sqlalchemy-utils"; - version = "0.36.6"; + version = "0.37.7"; src = fetchPypi { inherit version; pname = "SQLAlchemy-Utils"; - sha256 = "0srs5w486wp5zydjs70igi5ypgxhm6h73grb85jz03fqpqaanzvs"; + sha256 = "sha256-cW2dlZIljbllGlEdA+ayVTJCwqRAhV7j99WBK7tV2es="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy/default.nix index 5964e38208..605334adf0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sqlalchemy/default.nix @@ -1,4 +1,11 @@ -{ stdenv, lib, fetchPypi, buildPythonPackage, isPy3k, isPy35, fetchpatch +{ stdenv +, lib +, fetchPypi +, buildPythonPackage +, isPy3k +, pythonOlder +, greenlet +, importlib-metadata , mock , pysqlite ? null , pytestCheckHook @@ -7,29 +14,24 @@ buildPythonPackage rec { pname = "SQLAlchemy"; - version = "1.3.23"; + version = "1.4.18"; src = fetchPypi { inherit pname version; - sha256 = "6fca33672578666f657c131552c4ef8979c1606e494f78cd5199742dfb26918b"; + sha256 = "0k3yfarfa0hcc0bza6nccy685gnmq6gikynqayrvddx6y7si0lnj"; }; - patches = [ - # fix test_pyodbc_extra_connect_azure test failure - (fetchpatch { - url = "https://github.com/sqlalchemy/sqlalchemy/commit/7293b3dc0e9eb3dae84ffd831494b85355df8e73.patch"; - sha256 = "1z61lzxamz74771ddlqmbxba1dcr77f016vqfcmb44dxb228w2db"; - }) + propagatedBuildInputs = [ + greenlet + ] ++ lib.optionals (pythonOlder "3.8") [ + importlib-metadata ]; checkInputs = [ pytestCheckHook - pytest_xdist mock ] ++ lib.optional (!isPy3k) pysqlite; - pytestFlagsArray = [ "-n auto" ]; - postInstall = '' sed -e 's:--max-worker-restart=5::g' -i setup.cfg ''; @@ -37,8 +39,10 @@ buildPythonPackage rec { dontUseSetuptoolsCheck = true; # disable mem-usage tests on mac, has trouble serializing pickle files - disabledTests = lib.optionals isPy35 [ "exception_persistent_flush_py3k "] - ++ lib.optionals stdenv.isDarwin [ "MemUsageWBackendTest" "MemUsageTest" ]; + disabledTests = lib.optionals stdenv.isDarwin [ + "MemUsageWBackendTest" + "MemUsageTest" + ]; meta = with lib; { homepage = "http://www.sqlalchemy.org/"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sqlite-utils/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sqlite-utils/default.nix index a6dd6e41dc..67a6dba1a8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sqlite-utils/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sqlite-utils/default.nix @@ -15,12 +15,12 @@ buildPythonPackage rec { pname = "sqlite-utils"; - version = "3.6"; + version = "3.9.1"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-WCqbz0tssy7i76Sg2PeexjDollypPGnOqqfUJOHAFWA="; + sha256 = "a08ed62eb269e26ae9c35b9be9cd3d395b0522157e6543128a40cc5302d8aa81"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sqlmap/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sqlmap/default.nix index 065228eca2..5b32cb8b64 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sqlmap/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sqlmap/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "sqlmap"; - version = "1.5.3"; + version = "1.5.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-b2Q5Zelz0AWbNQotOLWdwN5+20Q5jATH3nzLEJQRwno="; + sha256 = "fc4be53bb7f64b1cc2e8058e7660059d8f5afb9857cc033084953ea615a10305"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/srp/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/srp/default.nix index 31f77b0ee0..17a3ab51cc 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/srp/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/srp/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "srp"; - version = "1.0.17"; + version = "1.0.18"; src = fetchPypi { inherit pname version; - sha256 = "f2e3fed4e5cbfd6b481edc9cdd51a8c39a609eae117210218556004bdc9016b2"; + sha256 = "1582317ccd383dc39d54f223424c588254d73d1cfb2c5c24d945e018ec9516bb"; }; propagatedBuildInputs = [ six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/srpenergy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/srpenergy/default.nix new file mode 100644 index 0000000000..140062edf1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/srpenergy/default.nix @@ -0,0 +1,40 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, python-dateutil +, requests +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "srpenergy"; + version = "1.3.2"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "lamoreauxlab"; + repo = "srpenergy-api-client-python"; + rev = version; + sha256 = "03kldjk90mrnzf2hpd7xky0lpph853mjxc34kfa2m5mbpbpkxz9c"; + }; + + propagatedBuildInputs = [ + python-dateutil + requests + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "srpenergy.client" ]; + + meta = with lib; { + description = "Unofficial Python module for interacting with Srp Energy data"; + homepage = "https://github.com/lamoreauxlab/srpenergy-api-client-python"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/starkbank-ecdsa/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/starkbank-ecdsa/default.nix index 70b66b9a46..9d93544433 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/starkbank-ecdsa/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/starkbank-ecdsa/default.nix @@ -6,13 +6,13 @@ buildPythonPackage rec { pname = "starkbank-ecdsa"; - version = "1.1.0"; + version = "1.1.1"; src = fetchFromGitHub { owner = "starkbank"; repo = "ecdsa-python"; rev = "v${version}"; - sha256 = "03smk33zhmv1j1svgjnykak0jnw8yl0yv03i1gsasx71f33zmfwi"; + sha256 = "1x86ia0385c76nzqa00qyrvnn4j174n6piq85m7ar5i0ij7qky9a"; }; checkInputs = [ pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/starline/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/starline/default.nix new file mode 100644 index 0000000000..4f4ad545f2 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/starline/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, aiohttp +, requests +}: + +buildPythonPackage rec { + pname = "starline"; + version = "0.1.5"; + + disabled = pythonOlder "3.5"; + + src = fetchPypi { + inherit pname version; + sha256 = "1753f5fcd2a6976aed775afb03f8392159f040c673917cc0c634510d95c13cb9"; + }; + + propagatedBuildInputs = [ + aiohttp + requests + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "starline" ]; + + meta = with lib; { + description = "Unofficial python library for StarLine API"; + homepage = "https://github.com/Anonym-tsk/starline"; + license = licenses.asl20; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/staticjinja/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/staticjinja/default.nix index 1f9a63927b..0681218cd0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/staticjinja/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/staticjinja/default.nix @@ -2,18 +2,19 @@ , fetchFromGitHub , buildPythonPackage , poetry -, isPy27 , docopt , easywatch , jinja2 , pytestCheckHook , pytest-check , markdown +, testVersion +, staticjinja }: buildPythonPackage rec { pname = "staticjinja"; - version = "2.0.0"; + version = "2.1.0"; format = "pyproject"; # No tests in pypi @@ -21,7 +22,7 @@ buildPythonPackage rec { owner = "staticjinja"; repo = pname; rev = version; - sha256 = "0z5y4l4sv4c7zmp6pj1ws3psq7i87xqbcmk648bmsa1d6prr1hil"; + sha256 = "sha256-VKsDvWEurBdckWbPG5hQLK3dzdM7XVbrp23fR5wp1xk="; }; nativeBuildInputs = [ @@ -45,6 +46,10 @@ buildPythonPackage rec { export PATH="$PATH:$out/bin"; ''; + passthru.tests.version = testVersion { + package = staticjinja; + }; + meta = with lib; { description = "A library and cli tool that makes it easy to build static sites using Jinja2"; homepage = "https://staticjinja.readthedocs.io/en/latest/"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/stopit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/stopit/default.nix new file mode 100644 index 0000000000..4d504da674 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/stopit/default.nix @@ -0,0 +1,26 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +}: + +buildPythonPackage rec { + pname = "stopit"; + version = "1.1.2"; + + # tests are missing from the PyPi tarball + src = fetchFromGitHub { + owner = "glenfant"; + repo = pname; + rev = version; + sha256 = "sha256-uXJUA70JOGWT2NmS6S7fPrTWAJZ0mZ/hICahIUzjfbw="; + }; + + pythonImportsCheck = [ "stopit" ]; + + meta = with lib; { + description = "Raise asynchronous exceptions in other thread, control the timeout of blocks or callables with a context manager or a decorator"; + homepage = "https://github.com/glenfant/stopit"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ veprbl ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/streamz/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/streamz/default.nix index 62e71bd2fd..2b32717452 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/streamz/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/streamz/default.nix @@ -1,4 +1,7 @@ -{ lib, buildPythonPackage, fetchPypi +{ lib +, buildPythonPackage +, fetchPypi +, fetchpatch , confluent-kafka , distributed , flaky @@ -22,6 +25,14 @@ buildPythonPackage rec { sha256 = "04446ece273c041506b1642bd3d8380367a8372196be4d6d6d03faafadc590b2"; }; + patches = [ + # Fix apply import from dask + (fetchpatch { + url = "https://patch-diff.githubusercontent.com/raw/python-streamz/streamz/pull/423.patch"; + sha256 = "sha256-CR+uRvzaFu9WQ633tbvX3gAnudhlVN6VvmxKiR37diw="; + }) + ]; + propagatedBuildInputs = [ networkx tornado @@ -46,6 +57,7 @@ buildPythonPackage rec { checkPhase = '' pytest --deselect=streamz/tests/test_sources.py::test_tcp_async \ --deselect=streamz/tests/test_sources.py::test_tcp \ + --deselect=streamz/tests/test_core.py::test_partition_timeout \ --ignore=streamz/tests/test_kafka.py ''; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/strictyaml/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/strictyaml/default.nix index ddc497a64a..30028a9599 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/strictyaml/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/strictyaml/default.nix @@ -7,15 +7,20 @@ }: buildPythonPackage rec { - version = "1.3.2"; + version = "1.4.2"; pname = "strictyaml"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "637399fd80dccc95f5287b2606b74098b23c08031b7ec33c5afb314ccbf10948"; + sha256 = "sha256-3bTk6AfdUQybx/xQ/I0Tae1pbtXMktSUtedSuoJ2paI="; }; + postPatch = '' + substituteInPlace setup.py \ + --replace "ruamel.yaml==0.17.4" "ruamel.yaml" + ''; + propagatedBuildInputs = [ ruamel_yaml python-dateutil ]; # Library tested with external tool diff --git a/third_party/nixpkgs/pkgs/development/python-modules/stringtemplate/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/stringtemplate/default.nix index 8bdb69a307..336a371c07 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/stringtemplate/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/stringtemplate/default.nix @@ -1,4 +1,4 @@ -{ lib, fetchurl, buildPythonPackage, antlr, isPy3k }: +{ lib, fetchurl, buildPythonPackage, antlr2, isPy3k }: buildPythonPackage rec { pname = "PyStringTemplate"; @@ -9,7 +9,7 @@ buildPythonPackage rec { sha256 = "0lbib0l8c1q7i1j610rwcdagymr1idahrql4dkgnm5rzyg2vk3ml"; }; - propagatedBuildInputs = [ antlr ]; + propagatedBuildInputs = [ antlr2 ]; disabled = isPy3k; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/stripe/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/stripe/default.nix index 4be51c488d..cfdc173995 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/stripe/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/stripe/default.nix @@ -2,7 +2,7 @@ buildPythonPackage rec { pname = "stripe"; - version = "2.56.0"; + version = "2.58.0"; # Tests require network connectivity and there's no easy way to disable # them. ~ C. @@ -10,7 +10,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "2ff904fb8dee0d25f135059468a876852d24dc8cbe0b45d7aff56a028045777c"; + sha256 = "34829b528e652ffc919d40eff2ba78021149818bab76e33c07801382921cf6d5"; }; propagatedBuildInputs = [ requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sumo/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sumo/default.nix index cc47eafd1a..204bb80e58 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sumo/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sumo/default.nix @@ -14,7 +14,7 @@ buildPythonPackage rec { pname = "sumo"; - version = "2.2.4"; + version = "2.2.5"; disabled = pythonOlder "3.6"; @@ -23,7 +23,7 @@ buildPythonPackage rec { owner = "SMTG-UCL"; repo = "sumo"; rev = "v${version}"; - sha256 = "051353gsxmh4qnabshfnc00mmzdbh1fgk1xdfnsfgcnijxgw25bb"; + sha256 = "1vwqyv215yf51j1278cn7l8mpqmy1grm9j7z3hxjlz4w65cff324"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sunpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sunpy/default.nix index 2de1e3fd5f..987523ed42 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sunpy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sunpy/default.nix @@ -31,12 +31,12 @@ buildPythonPackage rec { pname = "sunpy"; - version = "2.1.2"; + version = "3.0.0"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "8bbc440e606a4f3fcbd1441150d81da6f0208adace9dc06f6afd2c9cb7c08908"; + sha256 = "sha256-N/DAvnO+S9E4tndEWpiG84P3FCFwxYNdGFxbxUVsTx8="; }; nativeBuildInputs = [ @@ -74,9 +74,12 @@ buildPythonPackage rec { # darwin has write permission issues doCheck = stdenv.isLinux; + # ignore documentation tests checkPhase = '' - PY_IGNORE_IMPORTMISMATCH=1 HOME=$(mktemp -d) pytest sunpy -k 'not rst' + PY_IGNORE_IMPORTMISMATCH=1 HOME=$(mktemp -d) pytest sunpy -k 'not rst' \ + --deselect=sunpy/tests/tests/test_self_test.py::test_main_nonexisting_module \ + --deselect=sunpy/tests/tests/test_self_test.py::test_main_stdlib_module ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/surepy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/surepy/default.nix index ff2b588e47..39be204a3d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/surepy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/surepy/default.nix @@ -2,6 +2,7 @@ , aiodns , aiohttp , async-timeout +, attrs , brotlipy , buildPythonPackage , cchardet @@ -28,12 +29,19 @@ buildPythonPackage rec { sha256 = "sha256-XoYiZPBc9SybyKocui1HqSA+YPiPpbupJWMCfmQT5RU="; }; + postPatch = '' + substituteInPlace pyproject.toml \ + --replace 'click = "^7.1.2"' 'click = "*"' \ + --replace 'attrs = "^20.3.0"' 'attrs = "*"' + ''; + nativeBuildInputs = [ poetry-core ]; propagatedBuildInputs = [ aiodns aiohttp async-timeout + attrs brotlipy cchardet click diff --git a/third_party/nixpkgs/pkgs/development/python-modules/svglib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/svglib/default.nix index acd8fcb781..1bc1e58f1a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/svglib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/svglib/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "svglib"; - version = "1.0.1"; + version = "1.1.0"; src = fetchPypi { inherit pname version; - sha256 = "ff01593e8c07ea462d3742e1f4141bfa261cbd4400ceb25dfb8fec3508ad0e50"; + sha256 = "520ee5290ee2ebeebd20ca0d7d995c08c903b364fcf515826bab43a1288d422e"; }; disabled = !isPy3k; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/symengine/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/symengine/default.nix index 831583c132..c20f2338fa 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/symengine/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/symengine/default.nix @@ -11,13 +11,13 @@ buildPythonPackage rec { pname = "symengine"; - version = "0.7.0.post3"; + version = "0.7.2"; src = fetchFromGitHub { owner = "symengine"; repo = "symengine.py"; rev = "v${version}"; - sha256 = "1hpwnnv6f7f2wj33zaaj3i2r0d0qj0jwm3fd4ayicj0rvqya50rx"; + sha256 = "1xaclpvk7m6mbp70zrsvi3blz4v89pbsf7b6rpmx5903m6kxqr4m"; }; postConfigure = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/sympy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/sympy/default.nix index c935176e0d..0d9cf098e6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/sympy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/sympy/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "sympy"; - version = "1.7.1"; + version = "1.8"; src = fetchPypi { inherit pname version; - sha256 = "sha256-o96SYel1Nbg7uGB7DaLH0DEmZQ+v6isniWV7Ipwkay4="; + sha256 = "1ca588a9f6ce6a323c5592f9635159c2093572826668a1022c75c75bdf0297cb"; }; checkInputs = [ glibcLocales ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/synologydsm-api/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/synologydsm-api/default.nix new file mode 100644 index 0000000000..71bd111442 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/synologydsm-api/default.nix @@ -0,0 +1,57 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, fetchpatch +, poetry-core +, requests +, urllib3 +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "synologydsm-api"; + version = "1.0.2"; + + format = "pyproject"; + + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "hacf-fr"; + repo = "synologydsm-api"; + rev = "v${version}"; + sha256 = "0gyahf1x6i6j9pslh1y3pyh3si5jvxb06r1w761b9gsxyk14y1si"; + }; + + patches = [ + # https://github.com/hacf-fr/synologydsm-api/pull/84 + (fetchpatch { + name = "switch-to-poetry-core.patch"; + url = "https://github.com/hacf-fr/synologydsm-api/commit/f1ea2be927388bdff6d43d09027b82a854635e34.patch"; + sha256 = "120pdgp2i4ds6y3rf9j372f9zdcf4y8rsgl1xjbkgdhkp76bkkgr"; + }) + ]; + + nativeBuildInputs = [ + poetry-core + ]; + + propagatedBuildInputs = [ + requests + urllib3 + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "synology_dsm" ]; + + meta = with lib; { + description = "Python API for communication with Synology DSM"; + homepage = "https://github.com/hacf-fr/synologydsm-api"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/systembridge/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/systembridge/default.nix index 94d41b7b67..2c7328c50d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/systembridge/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/systembridge/default.nix @@ -1,22 +1,24 @@ { lib , aiohttp +, websockets , buildPythonPackage , fetchFromGitHub }: buildPythonPackage rec { pname = "systembridge"; - version = "1.1.1"; + version = "1.2.4"; src = fetchFromGitHub { owner = "timmo001"; repo = "system-bridge-connector-py"; rev = "v${version}"; - sha256 = "0vyfi7nyzkzsgg84n5wh4hzwvx6fybgqdzbabnsmvszb9sm1vlb2"; + sha256 = "sha256-dZOtvJXBXMKC+VOyQRMyaWAXg8lHjLcM2Zz9P0/ILT8="; }; propagatedBuildInputs = [ aiohttp + websockets ]; # Project has no tests diff --git a/third_party/nixpkgs/pkgs/development/python-modules/telethon/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/telethon/default.nix index dbf0f26c3a..041b102ce3 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/telethon/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/telethon/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "telethon"; - version = "1.17.5"; + version = "1.21.1"; src = fetchPypi { inherit version; pname = "Telethon"; - sha256 = "1v1rgr030z8s1ldv5lm1811znyd568c22pmlrzzf3ls972xk514m"; + sha256 = "sha256-mTyDfvdFrd+XKifXv7oM5Riihj0aUOBzclW3ZNI+DvI="; }; patchPhase = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tempora/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tempora/default.nix index 734bfc6450..b06a53cb33 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tempora/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tempora/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "tempora"; - version = "4.0.1"; + version = "4.0.2"; src = fetchPypi { inherit pname version; - sha256 = "9af06854fafb26d3d40d3dd6402e8baefaf57f90e48fdc9a94f6b22827a60fb3"; + sha256 = "10fdc29bf85fa0df39a230a225bb6d093982fc0825b648a414bbc06bddd79909"; }; disabled = pythonOlder "3.2"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tensorboardx/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tensorboardx/default.nix index f83467520c..6d04506cf8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tensorboardx/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tensorboardx/default.nix @@ -18,13 +18,13 @@ buildPythonPackage rec { pname = "tensorboardx"; - version = "2.1"; + version = "2.2"; src = fetchFromGitHub { owner = "lanpa"; repo = "tensorboardX"; rev = "v${version}"; - sha256 = "1palz91y0b39pcmwg6wdmqfal38hai99dd6r88i3imqxdbmjghih"; + sha256 = "0wjlh5fhamrrff3rm8j5ws9ncblwjgwf3nanxgr1bkn7asgynhys"; }; # apparently torch API changed a bit at 1.6 diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tensorflow/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tensorflow/default.nix index 522fd73012..bbdecc8bdc 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tensorflow/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tensorflow/default.nix @@ -288,9 +288,9 @@ let fetchAttrs = { # cudaSupport causes fetch of ncclArchive, resulting in different hashes sha256 = if cudaSupport then - "1i7z2a7bc2q1vn1h9nx1xc6g1r1cby2xvbcs20fj9h6c2fgaw9j4" + "10m6qj3kchgxfgb6qh59vc51knm9r9pkng8bf90h00dnggvv8234" else - "0s8q5rxq8abr50c5jpwv96ncfc0k8jw7w70ri8viqy031g9v9v45"; + "04a98yrp09nd0p17k0jbzkgjppxs0yma7m5zkfrwgvr4g0w71v68"; }; buildAttrs = { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/terminado/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/terminado/default.nix index 846c8157b7..27c159349b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/terminado/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/terminado/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "terminado"; - version = "0.9.3"; + version = "0.10.1"; src = fetchPypi { inherit pname version; - sha256 = "261c0b7825fecf629666e1820b484a5380f7e54d6b8bd889fa482e99dcf9bde4"; + sha256 = "89d5dac2f4e2b39758a0ff9a3b643707c95a020a6df36e70583b88297cd59cbe"; }; propagatedBuildInputs = [ ptyprocess tornado ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/termplotlib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/termplotlib/default.nix index adccc99ac2..dae40dcb99 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/termplotlib/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/termplotlib/default.nix @@ -9,13 +9,13 @@ buildPythonPackage rec { pname = "termplotlib"; - version = "0.3.4"; + version = "0.3.5"; src = fetchFromGitHub { owner = "nschloe"; repo = pname; rev = "v${version}"; - sha256 = "17d2727bz6kqhxczixx6nxzz4hzyi2cssylzazjimk07syvycd6n"; + sha256 = "1z6bw6lkbrgjyq3ndsx20gwpai4scm1q9rjh4rdz0rvja4jdcv3z"; }; format = "pyproject"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tern/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tern/default.nix index 7eb889c873..e00e06561f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tern/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tern/default.nix @@ -15,11 +15,11 @@ }: buildPythonPackage rec { pname = "tern"; - version = "2.5.0"; + version = "2.6.1"; src = fetchPypi { inherit pname version; - sha256 = "606c62944991b2cbcccf3f5353be693305d6d7d318c3865b9ecca49dbeab2727"; + sha256 = "749c18ef493ebe3ac28624b2b26c6e38f77de2afd6a6579d2c92393d8fbdbd46"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/testpath/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/testpath/default.nix index c95bd0c78b..be332ac791 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/testpath/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/testpath/default.nix @@ -1,18 +1,22 @@ { lib , buildPythonPackage , fetchPypi +, pytestCheckHook }: buildPythonPackage rec { pname = "testpath"; - version = "0.4.4"; - format = "wheel"; + version = "0.5.0"; src = fetchPypi { - inherit pname version format; - sha256 = "bfcf9411ef4bf3db7579063e0546938b1edda3d69f4e1fb8756991f5951f85d4"; + inherit pname version; + sha256 = "05z4s4d5i1ja16hiv4jhqv63fvg1a4vw77s0ay1sw11hrl5pmkqs"; }; + checkInputs = [ + pytestCheckHook + ]; + meta = with lib; { description = "Test utilities for code working with files and commands"; license = licenses.mit; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/textacy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/textacy/default.nix index 9f9fe685c9..5c8928a385 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/textacy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/textacy/default.nix @@ -1,34 +1,39 @@ -{ lib, buildPythonPackage, fetchPypi, isPy27 +{ lib +, buildPythonPackage , cachetools , cytoolz +, fetchPypi , jellyfish +, joblib , matplotlib , networkx , numpy , pyemd , pyphen -, pytest +, pytestCheckHook +, pythonOlder , requests , scikit-learn , scipy , spacy -, srsly +, tqdm }: buildPythonPackage rec { pname = "textacy"; - version = "0.10.1"; - disabled = isPy27; + version = "0.11.0"; + disabled = pythonOlder "3.7"; src = fetchPypi { inherit pname version; - sha256 = "ff72adc6dbb85db6981324e226fff77830da57d7fe7e4adb2cafd9dc2a8bfa7d"; + sha256 = "sha256-d/tyTCewoERA15iBv4H2LORFzgco15fnnN1sneeGuF4="; }; propagatedBuildInputs = [ cachetools cytoolz jellyfish + joblib matplotlib networkx numpy @@ -38,22 +43,25 @@ buildPythonPackage rec { scikit-learn scipy spacy - srsly + tqdm ]; - checkInputs = [ pytest ]; - # almost all tests have to deal with downloading a dataset, only test pure tests - checkPhase = '' - pytest tests/test_text_utils.py \ - tests/test_utils.py \ - tests/preprocessing \ - tests/datasets/test_base_dataset.py - ''; + checkInputs = [ + pytestCheckHook + ]; + + pytestFlagsArray = [ + # Almost all tests have to deal with downloading a dataset, only test pure tests + "tests/test_constants.py" + "tests/preprocessing/test_normalize.py" + "tests/similarity/test_edits.py" + "tests/preprocessing/test_resources.py" + "tests/preprocessing/test_replace.py" + ]; + + pythonImportsCheck = [ "textacy" ]; meta = with lib; { - # scikit-learn in pythonPackages is too new for textacy - # remove as soon as textacy support scikit-learn >= 0.24 - broken = true; description = "Higher-level text processing, built on spaCy"; homepage = "https://textacy.readthedocs.io/"; license = licenses.asl20; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tgcrypto/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tgcrypto/default.nix new file mode 100644 index 0000000000..7fd62d7bcb --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/tgcrypto/default.nix @@ -0,0 +1,33 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "tgcrypto"; + version = "1.2.2"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "pyrogram"; + repo = "tgcrypto"; + rev = "v${version}"; + sha256 = "1vyjycjb2n790371kf47qc0mkvd4bxmhh65cfxjsrcjpiri7shjf"; + }; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "tgcrypto" ]; + + meta = with lib; { + description = "Fast and Portable Telegram Crypto Library for Python"; + homepage = "https://github.com/pyrogram/tgcrypto"; + license = licenses.lgpl3Plus; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/thespian/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/thespian/default.nix index 589ff573ca..7f353a1920 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/thespian/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/thespian/default.nix @@ -1,13 +1,13 @@ { fetchPypi, buildPythonPackage, lib }: buildPythonPackage rec { - version = "3.10.3"; + version = "3.10.5"; pname = "thespian"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "d9152089f239c80339eb0431b9561966a841fb3ab0d043b36fa47934fc7956f2"; + sha256 = "17adad8afbc4779a01f34a6595c63fceccfd21f10556b85a261338eb99b5d306"; }; # Do not run the test suite: it takes a long time and uses diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tifffile/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tifffile/default.nix index 70b815c4ec..40654366ea 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tifffile/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tifffile/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "tifffile"; - version = "2021.3.17"; + version = "2021.6.14"; src = fetchPypi { inherit pname version; - sha256 = "1b72c92ecd2273e52686c0f8792d1d1c4da4109b241dd1723dfe56ef4d1ad612"; + sha256 = "a2f83d82800a8d83cbd04340f9d65a6873a970874947a6b823b1b1238e84cba6"; }; patches = lib.optional isPy27 ./python2-regex-compat.patch; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/titlecase/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/titlecase/default.nix index 9dc09db98f..7a250c680e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/titlecase/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/titlecase/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "titlecase"; - version = "2.0.0"; + version = "2.2.0"; src = fetchPypi { inherit pname version; - sha256 = "d6b24c4bfce6b05ee55da48901a1aa39eac20f223160b7872dcf1b8182214bec"; + sha256 = "5d97ee51da37fb57c8753b79efa8edfdf3f10c0060de926efee970081e28d52f"; }; propagatedBuildInputs = [ regex ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tld/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tld/default.nix index ed601a2620..875ab959a7 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tld/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tld/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "tld"; - version = "0.12.5"; + version = "0.12.6"; src = fetchPypi { inherit pname version; - sha256 = "0d1lbbg2qdw5jjxks0dqlf69bki5885mhj8ysvgylmrni56hjqqv"; + sha256 = "69fed19d26bb3f715366fb4af66fdeace896c55c052b00e8aaba3a7b63f3e7f0"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tomlkit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tomlkit/default.nix index cabe2ebcd5..fd6cec70f0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tomlkit/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tomlkit/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "tomlkit"; - version = "0.7.0"; + version = "0.7.2"; src = fetchPypi { inherit pname version; - sha256 = "ac57f29693fab3e309ea789252fcce3061e19110085aa31af5446ca749325618"; + sha256 = "d7a454f319a7e9bd2e249f239168729327e4dd2d27b17dc68be264ad1ce36754"; }; propagatedBuildInputs = diff --git a/third_party/nixpkgs/pkgs/development/python-modules/torchvision/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/torchvision/default.nix index 8f3cb085b6..a42c517ede 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/torchvision/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/torchvision/default.nix @@ -14,13 +14,13 @@ buildPythonPackage rec { pname = "torchvision"; - version = "0.9.0"; + version = "0.10.0"; src = fetchFromGitHub { owner = "pytorch"; repo = "vision"; rev = "v${version}"; - sha256 = "0rw186nki7q8igk481p2mvx4n763i3kpn663yp3dibkimddpnf9k"; + sha256 = "13j04ij0jmi58nhav1p69xrm8dg7jisg23268i3n6lnms37n02kc"; }; nativeBuildInputs = [ libpng ninja which ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/total-connect-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/total-connect-client/default.nix new file mode 100644 index 0000000000..1347ecab3e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/total-connect-client/default.nix @@ -0,0 +1,39 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, zeep +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "total-connect-client"; + version = "0.58"; + + src = fetchFromGitHub { + owner = "craigjmidwinter"; + repo = "total-connect-client"; + rev = version; + sha256 = "1dqmgvgvwjh235wghygan2jnfvmn9vz789in2as3asig9cifix9z"; + }; + + propagatedBuildInputs = [ + zeep + ]; + + checkInputs = [ + pytestCheckHook + ]; + + preCheck = '' + export PYTHONPATH="total_connect_client:$PYTHONPATH" + ''; + + pythonImportsCheck = [ "total_connect_client" ]; + + meta = with lib; { + description = "Interact with Total Connect 2 alarm systems"; + homepage = "https://github.com/craigjmidwinter/total-connect-client"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/towncrier/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/towncrier/default.nix index a7573e669a..6b699a2fbc 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/towncrier/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/towncrier/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "towncrier"; - version = "19.2.0"; + version = "19.9.0"; src = fetchPypi { inherit pname version; - sha256 = "15l1gb0hhi9pf3mhhb9vpc93w6w3hrih2ljmzbkgfb3dwqd1l9a8"; + sha256 = "19916889879353a8863f3de8cb1ef19b305a0b5cfd9d36159d76ca2fef08e9aa"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tox/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tox/default.nix index a90b3dcfdf..035bb9701b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tox/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tox/default.nix @@ -13,7 +13,7 @@ buildPythonPackage rec { pname = "tox"; - version = "3.23.0"; + version = "3.23.1"; buildInputs = [ setuptools-scm ]; propagatedBuildInputs = [ packaging pluggy py six virtualenv toml filelock ]; @@ -22,7 +22,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "05a4dbd5e4d3d8269b72b55600f0b0303e2eb47ad5c6fe76d3576f4c58d93661"; + sha256 = "307a81ddb82bd463971a273f33e9533a24ed22185f27db8ce3386bff27d324e3"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tqdm/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tqdm/default.nix index b941727189..fe2eb35d4d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tqdm/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tqdm/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "tqdm"; - version = "4.60.0"; + version = "4.61.1"; src = fetchPypi { inherit pname version; - sha256 = "ebdebdb95e3477ceea267decfc0784859aa3df3e27e22d23b83e9b272bf157ae"; + sha256 = "24be966933e942be5f074c29755a95b315c69a91f839a29139bf26ffffe2d3fd"; }; nativeBuildInputs = [ @@ -34,8 +34,8 @@ buildPythonPackage rec { rich tkinter ] ++ - # pandas is not supported on i686 - lib.optional (!stdenv.isi686) pandas; + # pandas is not supported on i686 or risc-v + lib.optional (!stdenv.isi686 && !stdenv.hostPlatform.isRiscV) pandas; # Remove performance testing. # Too sensitive for on Hydra. diff --git a/third_party/nixpkgs/pkgs/development/python-modules/trackpy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/trackpy/default.nix index ff4c4a7675..2c2df4878e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/trackpy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/trackpy/default.nix @@ -12,13 +12,13 @@ buildPythonPackage rec { pname = "trackpy"; - version = "0.4.2"; + version = "0.5.0"; src = fetchFromGitHub { owner = "soft-matter"; repo = pname; rev = "v${version}"; - sha256 = "16mc22z3104fvygky4gy3gvifjijm42db48v2z1y0fmyf6whi9p6"; + sha256 = "0if069f4sjyjl7wvzyzk8k9q9qjixswcc6aszrrgfb4a4mix3h1g"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/traitsui/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/traitsui/default.nix index 5748ff91db..774a42fc13 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/traitsui/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/traitsui/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "traitsui"; - version = "7.1.1"; + version = "7.2.1"; src = fetchPypi { inherit pname version; - sha256 = "77d9dc5830c4e7ab94f9225bc2f082430399d95c943f1616db41e83a94df38e5"; + sha256 = "dfc39015faf0591f9927e3d4d22bd95a16d49c85db30e60acd4ba7b85c7c5d5b"; }; propagatedBuildInputs = [ traits pyface six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/transmission-rpc/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/transmission-rpc/default.nix index 533b34ca34..50e112583f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/transmission-rpc/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/transmission-rpc/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "transmission-rpc"; - version = "3.2.4"; + version = "3.2.5"; src = fetchPypi { inherit pname version; - sha256 = "f852d1afd0f0d4f515fe20f0de94d57b6d2e36cbac45e07da43ea0b6518f535c"; + sha256 = "59598c9aa338703951686420fea292d9ba2d83d2a81361f16b64c2603c4ebb45"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/treq/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/treq/default.nix index 8bfbd534f5..85c5e10e8c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/treq/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/treq/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "treq"; - version = "21.1.0"; + version = "21.5.0"; src = fetchPypi { inherit pname version; - sha256 = "fdae0c872c444ed96c3cb11be8445d22e4afb731e87fdddae3b00c609e77199f"; + sha256 = "02ea86383fc4b57539c45a965eaa1e9fd28302cdf382d21da8430050c97be9b8"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/trezor/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/trezor/default.nix index bb85ca6b6f..546989ef34 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/trezor/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/trezor/default.nix @@ -33,6 +33,11 @@ buildPythonPackage rec { sha256 = "0r0j0y0ii62ppawc8qqjyaq0fkmmb0zk1xb3f9navxp556w2dljv"; }; + postPatch = '' + substituteInPlace setup.py \ + --replace 'click>=7,<8' 'click>=7,<9' + ''; + nativeBuildInputs = [ installShellFiles ]; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/trimesh/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/trimesh/default.nix index aad81957d7..e9b80d7979 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/trimesh/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/trimesh/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "trimesh"; - version = "3.9.10"; + version = "3.9.20"; src = fetchPypi { inherit pname version; - sha256 = "7ed243bc818f7a9a021d8dd39f69ae7ed366dfd9582b13d686e1b1e8c8326bcf"; + sha256 = "476173507224bd07febc94070d30e5d704f541b48cd2db4c3bc2fe562498e22c"; }; propagatedBuildInputs = [ numpy ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/trio/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/trio/default.nix index baaff068db..acd7c7acfb 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/trio/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/trio/default.nix @@ -18,12 +18,12 @@ buildPythonPackage rec { pname = "trio"; - version = "0.18.0"; + version = "0.19.0"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "0xm0bd1rrlb4l9q0nf2n1wg7xh42ljdnm4i4j0651zi73zk6m9l7"; + sha256 = "895e318e5ec5e8cea9f60b473b6edb95b215e82d99556a03eb2d20c5e027efe1"; }; checkInputs = [ astor pytestCheckHook pyopenssl trustme jedi pylint yapf ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/trustme/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/trustme/default.nix index a959bef168..556ca3e2e6 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/trustme/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/trustme/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "trustme"; - version = "0.7.0"; + version = "0.8.0"; src = fetchPypi { inherit pname version; - sha256 = "1fde1dd27052ab5e5693e1fbe3ba091a6496daf1125409d73232561145fca369"; + sha256 = "3dcfbe186bf33d146347c6180b67564257f2708960027ab6d24fea2865daabca"; }; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/trytond/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/trytond/default.nix index 1be8fc18d2..f0cb79b0a8 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/trytond/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/trytond/default.nix @@ -23,12 +23,12 @@ buildPythonApplication rec { pname = "trytond"; - version = "5.8.5"; + version = "5.8.9"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "62753cebdae2d9e2d6bf8a5dde840ef77540414c4df76c8ed202c0c0d0bedb02"; + sha256 = "5f14e9615ff91e18c146c74eb4c1cd56112662361a52c73389f15baced0bef18"; }; # Tells the tests which database to use diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tubeup/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tubeup/default.nix index 9d63e466e2..c8e5db2680 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tubeup/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tubeup/default.nix @@ -9,13 +9,13 @@ buildPythonPackage rec { pname = "tubeup"; - version = "0.0.25"; + version = "0.0.26"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "c1869363eddb85f39c05971d159bb2bf8cafa596acff3b9117635ebebfd1d342"; + sha256 = "842bc03c354d8f952436109264db6cd9146f26cee281d1540d5d7c3aa7371bcc"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tuyaha/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tuyaha/default.nix index a53124783d..749ac4e198 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tuyaha/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tuyaha/default.nix @@ -6,13 +6,13 @@ buildPythonPackage rec { pname = "tuyaha"; - version = "0.0.10"; + version = "0.0.11"; src = fetchFromGitHub { owner = "PaulAnnekov"; repo = pname; rev = version; - sha256 = "0n08mqrz76zv1cyqky6ibs6im1fqcywkiyvfmfabml0vzvr43awf"; + sha256 = "sha256-PTIw/2NRHHiqV6E5oj2pMeGq1uApevKfT2n5zV8AQmM="; }; propagatedBuildInputs = [ requests ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tvdb_api/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tvdb_api/default.nix index 845aff673b..2af25abf3e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tvdb_api/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tvdb_api/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "tvdb_api"; - version = "3.0.2"; + version = "3.1.0"; src = fetchPypi { inherit pname version; - sha256 = "6a0135815cb680da38d78121d4d659d8e54a25f4db2816cd86d62916b92f23b2"; + sha256 = "f63f6db99441bb202368d44aaabc956acc4202b18fc343a66bf724383ee1f563"; }; propagatedBuildInputs = [ requests-cache ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/tvnamer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/tvnamer/default.nix index 6a720421c7..a9439d3e88 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/tvnamer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/tvnamer/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "tvnamer"; - version = "3.0.2"; + version = "3.0.4"; src = fetchPypi { inherit pname version; - sha256 = "a5ff916e104b2c0b567c2c7f2d8ae15a66a7ac57d67390e7c67207a33b79022f"; + sha256 = "dc2ea8188df6ac56439343630466b874c57756dd0b2538dd8e7905048f425f04"; }; checkInputs = [ pytest ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/twiggy/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/twiggy/default.nix index 45e5986022..748d451766 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/twiggy/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/twiggy/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "Twiggy"; - version = "0.5.0"; + version = "0.5.1"; src = fetchPypi { inherit pname version; - sha256 = "259ae96cb22e80c49e75c37dc2f7497028c5dc19018958f05fa00ec08fc2569f"; + sha256 = "7938840275972f6ce89994a5bdfb0b84f0386301a043a960af6364952e78ffe4"; }; propagatedBuildInputs = [ six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/twitter/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/twitter/default.nix index 7114dc661f..f8a5124f2d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/twitter/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/twitter/default.nix @@ -1,17 +1,19 @@ { lib , buildPythonPackage , fetchPypi +, setuptools-scm }: buildPythonPackage rec { pname = "twitter"; - version = "1.18.0"; + version = "1.19.3"; src = fetchPypi { inherit pname version; - sha256 = "acdc85e5beea752967bb64c63bde8b915c49a31a01db1b2fecccf9f2c1d5c44d"; + sha256 = "a56ff9575fbd50a51ce91107dcb5a4c3fd00c2ba1bcb172ce538b0948d3626e6"; }; + nativeBuildInputs = [ setuptools-scm ]; doCheck = false; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/txredisapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/txredisapi/default.nix new file mode 100644 index 0000000000..9d8b268b30 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/txredisapi/default.nix @@ -0,0 +1,28 @@ +{ lib, buildPythonPackage, fetchFromGitHub, nixosTests, six, twisted }: + +buildPythonPackage rec { + pname = "txredisapi"; + version = "1.4.7"; + + src = fetchFromGitHub { + owner = "IlyaSkriblovsky"; + repo = "txredisapi"; + rev = "1.4.7"; + sha256 = "1f7j3c5l7jcfphvsk7nqmgyb4jaydbzq081m555kw0f9xxak0pgq"; + }; + + propagatedBuildInputs = [ six twisted ]; + + doCheck = false; + pythonImportsCheck = [ "txredisapi" ]; + + passthru.tests.unit-tests = nixosTests.txredisapi; + + meta = with lib; { + homepage = "https://github.com/IlyaSkriblovsky/txredisapi"; + description = "non-blocking redis client for python"; + license = licenses.asl20; + maintainers = with maintainers; [ dandellion ]; + }; +} + diff --git a/third_party/nixpkgs/pkgs/development/python-modules/typecode/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/typecode/default.nix index c1208193f0..baed3c7fe4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/typecode/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/typecode/default.nix @@ -13,11 +13,11 @@ }: buildPythonPackage rec { pname = "typecode"; - version = "21.2.24"; + version = "21.6.1"; src = fetchPypi { inherit pname version; - sha256 = "eaac8aee0b9c6142ad44671252ba00748202d218347d1c0451ce6cd76561e01b"; + sha256 = "d3a82859df5607c900972e08e1bca31e3fe2daed37afd1b8231cad2ef613d8d6"; }; dontConfigure = true; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/typed-ast/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/typed-ast/default.nix index 608ce8b65f..d5c190e1c4 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/typed-ast/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/typed-ast/default.nix @@ -1,20 +1,40 @@ -{ buildPythonPackage, fetchFromGitHub, lib, pythonOlder }: +{ buildPythonPackage, fetchFromGitHub, lib, pythonOlder, pytest }: buildPythonPackage rec { pname = "typed-ast"; - version = "1.4.1"; - src = fetchFromGitHub{ + version = "1.4.3"; + src = fetchFromGitHub { owner = "python"; repo = "typed_ast"; rev = version; - sha256 = "086r9qhls6mz1w72a6d1ld3m4fbkxklf6mgwbs8wpw0zlxjm7y40"; + sha256 = "16mn9snwik5n2ib65sw2xcaqdm02j8ps21zgjxf8kyy7qnx2mx4w"; }; # Only works with Python 3.3 and newer; disabled = pythonOlder "3.3"; - # No tests in archive - doCheck = false; + + pythonImportsCheck = [ + "typed_ast" + "typed_ast.ast27" + "typed_ast.ast3" + "typed_ast.conversions" + ]; + + checkInputs = [ + pytest + ]; + checkPhase = '' + runHook preCheck + + # We can't use pytestCheckHook because that invokes pytest with python -m pytest + # which adds the current directory to sys.path at the beginning. + # _That_ version of the typed_ast module doesn't have the C extensions we need. + pytest + + runHook postCheck + ''; + meta = { - homepage = "https://pypi.python.org/pypi/typed-ast"; - description = "a fork of Python 2 and 3 ast modules with type comment support"; + homepage = "https://github.com/python/typed_ast"; + description = "Python 2 and 3 ast modules with type comment support"; license = lib.licenses.asl20; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/typeguard/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/typeguard/default.nix index 2ee404cb18..0385bd7070 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/typeguard/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/typeguard/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "typeguard"; - version = "2.12.0"; + version = "2.12.1"; src = fetchPypi { inherit pname version; - sha256 = "sha256-/Kd/1My6Y0ZbQhzburWhqOOZTm1vGLRdortHXAnxR+8="; + sha256 = "c2af8b9bdd7657f4bd27b45336e7930171aead796711bc4cfc99b4731bb9d051"; }; buildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/typing-extensions/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/typing-extensions/default.nix index 655b3384af..fd8a25a485 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/typing-extensions/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/typing-extensions/default.nix @@ -4,11 +4,11 @@ let in buildPythonPackage rec { pname = "typing_extensions"; - version = "3.7.4.3"; + version = "3.10.0.0"; src = fetchPypi { inherit pname version; - sha256 = "99d4073b617d30288f569d3f13d2bd7548c3a7e4c8de87db09a9d29bb3a4a60c"; + sha256 = "50b6f157849174217d0656f99dc82fe932884fb250826c18350e159ec6cdf342"; }; checkInputs = lib.optional (pythonOlder "3.5") typing; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/typing-inspect/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/typing-inspect/default.nix index 569096cb46..4f09d6002d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/typing-inspect/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/typing-inspect/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "typing-inspect"; - version = "0.6.0"; + version = "0.7.1"; src = fetchPypi { inherit version; pname = "typing_inspect"; - sha256 = "1dzs9a1pr23dhbvmnvms2jv7l7jk26023g5ysf0zvnq8b791s6wg"; + sha256 = "1al2lyi3r189r5xgw90shbxvd88ic4si9w7n3d9lczxiv6bl0z84"; }; propagatedBuildInputs = [ @@ -26,6 +26,5 @@ buildPythonPackage rec { homepage = "https://github.com/ilevkivskyi/typing_inspect"; license = licenses.mit; maintainers = with maintainers; [ albakham ]; - broken = isPy39; # see https://github.com/ilevkivskyi/typing_inspect/issues/65 }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/typing/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/typing/default.nix index 823ee2af29..b3dcea2032 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/typing/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/typing/default.nix @@ -6,11 +6,11 @@ let in buildPythonPackage rec { pname = "typing"; - version = "3.7.4.3"; + version = "3.10.0.0"; src = fetchPypi { inherit pname version; - sha256 = "1187fb9c82fd670d10aa07bbb6cfcfe4bdda42d6fab8d5134f04e8c4d0b71cc9"; + sha256 = "13b4ad211f54ddbf93e5901a9967b1e07720c1d1b78d596ac6a439641aa1b130"; }; disabled = pythonAtLeast "3.5"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/unasync/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/unasync/default.nix new file mode 100644 index 0000000000..9b37edfb28 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/unasync/default.nix @@ -0,0 +1,45 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, setuptools +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "unasync"; + version = "0.5.0"; + + format = "pyproject"; + + src = fetchFromGitHub { + owner = "python-trio"; + repo = "unasync"; + rev = "v${version}"; + sha256 = "0h86i09v4909a8nk5lp36jlwz6rsln6vyg3d0i13ykxa6lrx1c2l"; + }; + + propagatedBuildInputs = [ + setuptools + ]; + + checkInputs = [ + pytestCheckHook + ]; + + disabledTests = [ + # mess with $PYTHONPATH + "test_build_py_modules" + "test_build_py_packages" + "test_project_structure_after_build_py_packages" + "test_project_structure_after_customized_build_py_packages" + ]; + + pythonImportsCheck = [ "unasync" ]; + + meta = with lib; { + description = "Project that can transform your asynchronous code into synchronous code"; + homepage = "https://github.com/python-trio/unasync"; + license = with licenses; [ mit /* or */ asl20 ]; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/unidic-lite/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/unidic-lite/default.nix new file mode 100644 index 0000000000..eec9c7022a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/unidic-lite/default.nix @@ -0,0 +1,29 @@ +{ lib +, buildPythonPackage +, fetchPypi +}: + +buildPythonPackage rec { + pname = "unidic-lite"; + version = "1.0.8"; + format = "setuptools"; + + src = fetchPypi { + inherit pname version; + sha256 = "0idj4yp0sl27ylr2wzkybbh0wj7c843lp7cljw5d1m7xv5r4b7fv"; + }; + + # no tests + doCheck = false; + + pythonImportsCheck = [ + "unidic_lite" + ]; + + meta = with lib; { + description = "A small version of UniDic"; + homepage = "https://github.com/polm/unidic-lite"; + license = licenses.mit; + maintainers = teams.tts.members; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/upb-lib/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/upb-lib/default.nix new file mode 100644 index 0000000000..356a290241 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/upb-lib/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, pyserial-asyncio +, pytz +}: + +buildPythonPackage rec { + pname = "upb-lib"; + version = "0.4.12"; + + disabled = pythonOlder "3.7"; + + src = fetchPypi { + inherit pname version; + sha256 = "e668055d9c389aefd09203afb96a950a320095f225ef0a1aa611e592db92a71b"; + }; + + propagatedBuildInputs = [ + pyserial-asyncio + pytz + ]; + + # no tests on PyPI, no tags on GitHub + doCheck = false; + + pythonImportsCheck = [ "upb_lib" ]; + + meta = with lib; { + description = "Library for interacting with UPB PIM"; + homepage = "https://github.com/gwww/upb-lib"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/upcloud-api/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/upcloud-api/default.nix new file mode 100644 index 0000000000..e70a49be5a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/upcloud-api/default.nix @@ -0,0 +1,37 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, requests +, pytestCheckHook +, responses +}: + +buildPythonPackage rec { + pname = "upcloud-api"; + version = "2.0.0"; + + src = fetchFromGitHub { + owner = "UpCloudLtd"; + repo = "upcloud-python-api"; + rev = "v${version}"; + sha256 = "1kkgrn97pw4k49ys97hjrvh2j8y2p2r9970v9csgrk5wci4562wm"; + }; + + propagatedBuildInputs = [ + requests + ]; + + checkInputs = [ + pytestCheckHook + responses + ]; + + pythonImportsCheck = [ "upcloud_api" ]; + + meta = with lib; { + description = "UpCloud API Client"; + homepage = "https://github.com/UpCloudLtd/upcloud-python-api"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/uritools/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/uritools/default.nix index d90bf39f33..1d91504280 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/uritools/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/uritools/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "uritools"; - version = "3.0.1"; + version = "3.0.2"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "a3e9c794d44fdbd54642dcb7d6ef3ba9866d953eb34f65aeca3754b7ad5c1ea0"; + sha256 = "28ffef82ce3b2793237d36e45aa7cde28dae6502f6a93fdbd05ede401520e279"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/urllib3/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/urllib3/default.nix index 35cb0b2556..eec8e284c0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/urllib3/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/urllib3/default.nix @@ -19,11 +19,11 @@ buildPythonPackage rec { pname = "urllib3"; - version = "1.26.4"; + version = "1.26.5"; src = fetchPypi { inherit pname version; - sha256 = "0dw9w9bs3hmr5dp3r3h43jyzzb1g1046ag7lj8pqf58i4kvj3c77"; + sha256 = "sha256-p6zQl3ElMl9Ra9qXNfpxQrkJqNAeiy5MgQjQmE5uAJg="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/uvicorn/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/uvicorn/default.nix index 36e8b12929..22e291c4b5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/uvicorn/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/uvicorn/default.nix @@ -1,67 +1,71 @@ -{ stdenv -, lib +{ lib , buildPythonPackage +, callPackage , fetchFromGitHub +, asgiref , click +, colorama , h11 , httptools -, uvloop -, websockets -, wsproto -, pytestCheckHook -, pytest-mock +, python-dotenv , pyyaml , requests -, trustme , typing-extensions -, isPy27 +, uvloop +, watchgod +, websockets +, wsproto , pythonOlder }: buildPythonPackage rec { pname = "uvicorn"; - version = "0.13.2"; - disabled = isPy27; + version = "0.14.0"; + disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "encode"; repo = pname; rev = version; - sha256 = "04zgmp9z46k72ay6cz7plga6d3w3a6x41anabm7ramp7jdqf6na9"; + sha256 = "164x92k3rs47ihkmwq5av396576dxp4rzv6557pwgc1ign2ikqy1"; }; + outputs = [ + "out" + "testsout" + ]; + propagatedBuildInputs = [ + asgiref click + colorama h11 httptools + python-dotenv + pyyaml uvloop + watchgod websockets wsproto ] ++ lib.optionals (pythonOlder "3.8") [ typing-extensions ]; - checkInputs = [ - pytestCheckHook - pytest-mock - pyyaml - requests - trustme + postInstall = '' + mkdir $testsout + cp -R tests $testsout/tests + ''; + + pythonImportsCheck = [ + "uvicorn" ]; - doCheck = !stdenv.isDarwin; + # check in passthru.tests.pytest to escape infinite recursion with httpx/httpcore + doCheck = false; - __darwinAllowLocalNetworking = true; - - pytestFlagsArray = [ - # watchgod required the watchgod package, which isn't available in nixpkgs - "--ignore=tests/supervisors/test_reload.py" - ]; - - disabledTests = [ - "test_supported_upgrade_request" - "test_invalid_upgrade" - ]; + passthru.tests = { + pytest = callPackage ./tests.nix { }; + }; meta = with lib; { homepage = "https://www.uvicorn.org/"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/uvicorn/tests.nix b/third_party/nixpkgs/pkgs/development/python-modules/uvicorn/tests.nix new file mode 100644 index 0000000000..2fc0e932b8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/uvicorn/tests.nix @@ -0,0 +1,40 @@ +{ stdenv +, buildPythonPackage +, uvicorn +, httpx +, pytest-asyncio +, pytestCheckHook +, pytest-mock +, requests +, trustme +}: + +buildPythonPackage rec { + pname = "uvicorn-tests"; + inherit (uvicorn) version; + + src = uvicorn.testsout; + + dontBuild = true; + dontInstall = true; + + checkInputs = [ + uvicorn + httpx + pytestCheckHook + pytest-asyncio + pytest-mock + requests + trustme + ]; + + doCheck = !stdenv.isDarwin; + + __darwinAllowLocalNetworking = true; + + disabledTests = [ + "test_supported_upgrade_request" + "test_invalid_upgrade" + ]; +} + diff --git a/third_party/nixpkgs/pkgs/development/python-modules/uvloop/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/uvloop/default.nix index 125850a080..a762ec55ee 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/uvloop/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/uvloop/default.nix @@ -48,6 +48,9 @@ buildPythonPackage rec { # test gets stuck in epoll_pwait on hydras aarch64 builders # https://github.com/MagicStack/uvloop/issues/412 "--deselect" "tests/test_tcp.py::Test_AIO_TCPSSL::test_remote_shutdown_receives_trailing_data" + ] ++ lib.optionals (stdenv.isDarwin && stdenv.isAarch64) [ + # Flaky test: https://github.com/MagicStack/uvloop/issues/412 + "--deselect" "tests/test_tcp.py::Test_UV_TCPSSL::test_shutdown_timeout_handler_not_set" ]; disabledTestPaths = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/vdirsyncer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/vdirsyncer/default.nix index eb720c7f20..1dd80b52d1 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/vdirsyncer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/vdirsyncer/default.nix @@ -2,7 +2,7 @@ , buildPythonPackage , fetchPypi , fetchpatch -, isPy27 +, pythonOlder , click , click-log , click-threading @@ -18,21 +18,23 @@ }: buildPythonPackage rec { - version = "0.16.8"; + version = "0.18.0"; pname = "vdirsyncer"; - disabled = isPy27; + disabled = pythonOlder "3.7"; src = fetchPypi { inherit pname version; - sha256 = "bfdb422f52e1d4d60bd0635d203fb59fa7f613397d079661eb48e79464ba13c5"; + sha256 = "sha256-J7w+1R93STX7ujkpFcjI1M9jmuUaRLZ0aGtJoQJfwgE="; }; propagatedBuildInputs = [ - click click-log click-threading - requests_toolbelt + atomicwrites + click + click-log + click-threading requests requests_oauthlib # required for google oauth sync - atomicwrites + requests_toolbelt ]; nativeBuildInputs = [ @@ -46,16 +48,8 @@ buildPythonPackage rec { pytest-subtesthack ]; - patches = [ - (fetchpatch { - name = "update-usage-deprecated-method.patch"; - url = "https://github.com/pimutils/vdirsyncer/commit/7577fa21177442aacc2d86640ef28cebf1c4aaef.patch"; - sha256 = "0inkr1wfal20kssij8l5myhpjivxg8wlvhppqc3lvml9d1i75qbh"; - }) - ]; - postPatch = '' - substituteInPlace setup.py --replace "click>=5.0,<6.0" "click" + sed -i -e '/--cov/d' -e '/--no-cov/d' setup.cfg ''; preCheck = '' @@ -63,8 +57,9 @@ buildPythonPackage rec { ''; disabledTests = [ - "test_verbosity" "test_create_collections" # Flaky test exceeds deadline on hydra: https://github.com/pimutils/vdirsyncer/issues/837 + "test_request_ssl" + "test_verbosity" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/vega/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/vega/default.nix index 04c38838a4..50fc4275c9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/vega/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/vega/default.nix @@ -3,12 +3,12 @@ buildPythonPackage rec { pname = "vega"; - version = "3.4.0"; + version = "3.5.0"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "f343ceb11add58d24cd320d69e410b111a56c98c9069ebb4ef89c608c4c1950d"; + sha256 = "1c22877758cef97e81dbb665c83d31f7427bbc804a01503fa2845a35403c54ad"; }; propagatedBuildInputs = [ jupyter jupyter_core pandas ipywidgets ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/venstarcolortouch/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/venstarcolortouch/default.nix index 713059ad90..85634d1684 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/venstarcolortouch/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/venstarcolortouch/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "venstarcolortouch"; - version = "0.13"; + version = "0.14"; src = fetchPypi { inherit pname version; - sha256 = "04y9gmxb0vsmc5c930x9ziis5v83b29kfzsgjlww3pssj69lmw1s"; + sha256 = "sha256-wrsu1SffD4/RvDiE6yABfZN/oSDH8Ao/RJK7yL2QKy8="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/vilfo-api-client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/vilfo-api-client/default.nix new file mode 100644 index 0000000000..cdc01d93a8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/vilfo-api-client/default.nix @@ -0,0 +1,51 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, setuptools-scm +, getmac +, requests +, pytestCheckHook +, responses +}: + +buildPythonPackage rec { + pname = "vilfo-api-client"; + version = "0.3.3"; + + src = fetchFromGitHub { + owner = "ManneW"; + repo = "vilfo-api-client-python"; + rev = "v${version}"; + sha256 = "1gy5gpsg99rcm1cc3m30232za00r9i46sp74zpd12p3vzz1wyyqf"; + }; + + postPatch = '' + substituteInPlace setup.cfg \ + --replace "get-mac" "getmac" + ''; + + nativeBuildInputs = [ + setuptools-scm + ]; + + SETUPTOOLS_SCM_PRETEND_VERSION = version; + + propagatedBuildInputs = [ + getmac + requests + ]; + + checkInputs = [ + pytestCheckHook + responses + ]; + + pythonImportsCheck = [ "vilfo" ]; + + meta = with lib; { + description = "Simple wrapper client for the Vilfo router API"; + homepage = "https://github.com/ManneW/vilfo-api-client-python"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/vincenty/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/vincenty/default.nix new file mode 100644 index 0000000000..dbf174bd2a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/vincenty/default.nix @@ -0,0 +1,28 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +}: + +buildPythonPackage rec { + pname = "vincenty"; + version = "0.1.4"; + + src = fetchFromGitHub { + owner = "maurycyp"; + repo = "vincenty"; + rev = version; + sha256 = "1li8gv0zb1pdbxdybgaykm38lqbkb5dr7rph6zs1k4k3sh15ldw3"; + }; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "vincenty" ]; + + meta = with lib; { + description = "Calculate the geographical distance between 2 points with extreme accuracy"; + homepage = "https://github.com/maurycyp/vincenty"; + license = licenses.unlicense; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/virtual-display/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/virtual-display/default.nix index bf47297b1c..f2f6dd31a5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/virtual-display/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/virtual-display/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "PyVirtualDisplay"; - version = "2.1"; + version = "2.2"; propagatedBuildInputs = [ EasyProcess ]; src = fetchPypi { inherit pname version; - sha256 = "9d4c6957ec2c4753b5293fb6a60a90d7c27fc01bc5de9b5aa863f7c1e3fb4efc"; + sha256 = "3ecda6b183b03ba65dcfdf0019809722480d7b7e10eea6e3a40bf1ba3146bab7"; }; # requires X server diff --git a/third_party/nixpkgs/pkgs/development/python-modules/virtualenv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/virtualenv/default.nix index b25f162bae..2bcfa88b6a 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/virtualenv/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/virtualenv/default.nix @@ -23,11 +23,11 @@ buildPythonPackage rec { pname = "virtualenv"; - version = "20.4.3"; + version = "20.4.7"; src = fetchPypi { inherit pname version; - sha256 = "49ec4eb4c224c6f7dd81bb6d0a28a09ecae5894f4e593c89b0db0885f565a107"; + sha256 = "14fdf849f80dbb29a4eb6caa9875d476ee2a5cf76a5f5415fa2f1606010ab467"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/vivisect/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/vivisect/default.nix index 0d86f2ffbd..43e54bda9d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/vivisect/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/vivisect/default.nix @@ -10,12 +10,12 @@ }: buildPythonPackage rec { pname = "vivisect"; - version = "0.1.0"; + version = "0.2.1"; disabled = isPy3k; src = fetchPypi { inherit pname version; - sha256 = "ed5e8c24684841d30dc7b41f2bee87c0198816a453417ae2e130b7845ccb2629"; + sha256 = "8fc4d2097a1d0d8d97aa8c540984cb52432df759f04f2281a21a4e1b7d1a95a7"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/vowpalwabbit/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/vowpalwabbit/default.nix index c482211320..0a75600bb0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/vowpalwabbit/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/vowpalwabbit/default.nix @@ -15,11 +15,11 @@ buildPythonPackage rec { pname = "vowpalwabbit"; - version = "8.9.0"; + version = "8.10.2"; src = fetchPypi{ inherit pname version; - sha256 = "37fb7a400f3a7923a04df9921b3eef1bbe96117424ef083dcfed0e4eea77fa08"; + sha256 = "e9f7d525a6e88ebff41406409a5c31f79bb008f524fc63a61dc74bac6a1ac887"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/wallbox/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/wallbox/default.nix new file mode 100644 index 0000000000..a1136d8934 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/wallbox/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchPypi +, requests +, simplejson +}: + +buildPythonPackage rec { + pname = "wallbox"; + version = "0.4.6"; + + disabled = pythonOlder "3.7"; + + src = fetchPypi { + inherit pname version; + sha256 = "651c61e2264258382d1f54c4f0bf6bcd198482a744d8f1db3dd73084c240d9bb"; + }; + + propagatedBuildInputs = [ + requests + simplejson + ]; + + # no tests implemented + doCheck = false; + + pythonImportsCheck = [ "wallbox" ]; + + meta = with lib; { + description = "Module for interacting with Wallbox EV charger api"; + homepage = "https://github.com/cliviu74/wallbox"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/wasmer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/wasmer/default.nix index 373e7a0a22..d3881032af 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/wasmer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/wasmer/default.nix @@ -1,13 +1,14 @@ { lib +, stdenv , rustPlatform , fetchFromGitHub , buildPythonPackage +, libiconv }: -let + +buildPythonPackage rec { pname = "wasmer"; version = "1.0.0"; -in buildPythonPackage rec { - inherit pname version; src = fetchFromGitHub { owner = "wasmerio"; @@ -26,6 +27,8 @@ in buildPythonPackage rec { nativeBuildInputs = with rustPlatform; [ cargoSetupHook maturinBuildHook ]; + buildInputs = lib.optionals stdenv.isDarwin [ libiconv ]; + buildAndTestSubdir = "packages/api"; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/watchdog/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/watchdog/default.nix index 441630fe6f..e5d742bef2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/watchdog/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/watchdog/default.nix @@ -5,6 +5,7 @@ , argh , pathtools , pyyaml +, flaky , pytest-timeout , pytestCheckHook , CoreServices @@ -28,6 +29,7 @@ buildPythonPackage rec { ]; checkInputs = [ + flaky pytest-timeout pytestCheckHook ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/waterfurnace/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/waterfurnace/default.nix index a07c1e6333..526066f1fa 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/waterfurnace/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/waterfurnace/default.nix @@ -6,7 +6,7 @@ , pytest-runner , pytestCheckHook , requests -, websocket_client +, websocket-client }: buildPythonPackage rec { @@ -24,7 +24,7 @@ buildPythonPackage rec { click pytest-runner requests - websocket_client + websocket-client ]; checkInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/wcmatch/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/wcmatch/default.nix index bda48d3ec5..0cc08a9bf2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/wcmatch/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/wcmatch/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "wcmatch"; - version = "8.1.2"; + version = "8.2"; src = fetchPypi { inherit pname version; - sha256 = "efda751de15201b395b6d6e64e6ae3b6b03dc502a64c3c908aa5cad14c27eee5"; + sha256 = "4d54ddb506c90b5a5bba3a96a1cfb0bb07127909e19046a71d689ddfb18c3617"; }; propagatedBuildInputs = [ bracex ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/webargs/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/webargs/default.nix new file mode 100644 index 0000000000..6db909992f --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/webargs/default.nix @@ -0,0 +1,41 @@ +{ buildPythonPackage, fetchPypi, lib, isPy27, marshmallow, pytestCheckHook +, pytest-aiohttp, webtest, webtest-aiohttp, flask, django, bottle, tornado +, pyramid, falcon, aiohttp }: + +buildPythonPackage rec { + pname = "webargs"; + version = "8.0.0"; + disabled = isPy27; + + src = fetchPypi { + inherit pname version; + sha256 = "0xy6na8axc5wnp2wg3kvqbpl2iv0hx0rsnlrmrgkgp88znx6cmjn"; + }; + + pythonImportsCheck = [ + "webargs" + ]; + + + propagatedBuildInputs = [ marshmallow ]; + checkInputs = [ + pytestCheckHook + pytest-aiohttp + webtest + webtest-aiohttp + flask + django + bottle + tornado + pyramid + falcon + aiohttp + ]; + + meta = with lib; { + description = "Declarative parsing and validation of HTTP request objects, with built-in support for popular web frameworks"; + homepage = "https://github.com/marshmallow-code/webargs"; + license = licenses.mit; + maintainers = with maintainers; [ cript0nauta ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/websocket_client/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/websocket-client/default.nix similarity index 56% rename from third_party/nixpkgs/pkgs/development/python-modules/websocket_client/default.nix rename to third_party/nixpkgs/pkgs/development/python-modules/websocket-client/default.nix index 6ad0634631..ee09ceb105 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/websocket_client/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/websocket-client/default.nix @@ -1,26 +1,22 @@ { lib -, backports_ssl_match_hostname , buildPythonPackage , fetchPypi -, isPy27 +, pythonOlder , pytestCheckHook -, six +, pysocks }: buildPythonPackage rec { - pname = "websocket_client"; - version = "0.58.0"; + pname = "websocket-client"; + version = "1.1.0"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "sha256-Y1CbQdFYrlt/Z+tK0g/su07umUNOc+FANU3D/44JcW8="; + sha256 = "sha256-to5JWdcEdo+iDjXJ1QjI3Cu8BB/Y0mfA1zRc/+KCRWg="; }; - propagatedBuildInputs = [ - six - ] ++ lib.optional isPy27 backports_ssl_match_hostname; - - checkInputs = [ pytestCheckHook ]; + checkInputs = [ pytestCheckHook pysocks ]; pythonImportsCheck = [ "websocket" ]; @@ -29,5 +25,6 @@ buildPythonPackage rec { homepage = "https://github.com/websocket-client/websocket-client"; license = licenses.lgpl21Plus; maintainers = with maintainers; [ fab ]; + changelog = "https://github.com/websocket-client/websocket-client/blob/v${version}/ChangeLog"; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/websockets/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/websockets/default.nix index eeb12bd5b7..51df6c7023 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/websockets/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/websockets/default.nix @@ -1,37 +1,45 @@ { lib -, fetchFromGitHub , buildPythonPackage +, fetchFromGitHub +, python , pythonOlder -, pytest , stdenv }: buildPythonPackage rec { pname = "websockets"; - version = "8.1"; + version = "9.1"; + disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "aaugustin"; repo = pname; rev = version; - sha256 = "05jbqcbjg50ydwl0fijhdlqcq7fl6v99kjva66kmmzzza7vwa872"; + sha256 = "sha256-7Y12IUG+ulD4+CTRlY+NE6qYZyI9gCPDydwpt+uyYZk="; }; - disabled = pythonOlder "3.3"; - # Tests fail on Darwin with `OSError: AF_UNIX path too long` doCheck = !stdenv.isDarwin; # Disable all tests that need to terminate within a predetermined amount of - # time. This is nondeterministic. + # time. This is nondeterministic. patchPhase = '' sed -i 's/with self.assertCompletesWithin.*:/if True:/' \ - tests/test_protocol.py + tests/legacy/test_protocol.py ''; + checkPhase = '' + runHook preCheck + ${python.interpreter} -m unittest discover + runHook postCheck + ''; + + pythonImportsCheck = [ "websockets" ]; + meta = with lib; { - description = "WebSocket implementation in Python 3"; - homepage = "https://github.com/aaugustin/websockets"; + description = "WebSocket implementation in Python"; + homepage = "https://websockets.readthedocs.io/"; license = licenses.bsd3; + maintainers = with maintainers; [ fab ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/webtest-aiohttp/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/webtest-aiohttp/default.nix new file mode 100644 index 0000000000..7c6e358960 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/webtest-aiohttp/default.nix @@ -0,0 +1,29 @@ +{ buildPythonPackage, fetchFromGitHub, lib, isPy27, webtest, invoke, flake8 +, aiohttp, pytest-aiohttp, pytestCheckHook }: + +buildPythonPackage rec { + pname = "webtest-aiohttp"; + version = "2.0.0"; + disabled = isPy27; + + src = fetchFromGitHub { + owner = "sloria"; + repo = pname; + rev = version; + sha256 = "1apr1x0wmnc6l8wv67z4dp00fiiygda6rwpxlspfk7nk9zz37q2j"; + }; + + pythonImportsCheck = [ + "webtest_aiohttp" + ]; + + propagatedBuildInputs = [ webtest ]; + checkInputs = [ invoke flake8 aiohttp pytest-aiohttp pytestCheckHook ]; + + meta = with lib; { + description = "Provides integration of WebTest with aiohttp.web applications"; + homepage = "https://github.com/sloria/webtest-aiohttp"; + license = licenses.mit; + maintainers = with maintainers; [ cript0nauta ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/werkzeug/1.nix b/third_party/nixpkgs/pkgs/development/python-modules/werkzeug/1.nix new file mode 100644 index 0000000000..73bebd8366 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/werkzeug/1.nix @@ -0,0 +1,30 @@ +{ lib, stdenv, buildPythonPackage, fetchPypi +, itsdangerous, hypothesis +, pytestCheckHook, requests +, pytest-timeout +, isPy3k + }: + +buildPythonPackage rec { + pname = "Werkzeug"; + version = "1.0.1"; + + src = fetchPypi { + inherit pname version; + sha256 = "6c80b1e5ad3665290ea39320b91e1be1e0d5f60652b964a3070216de83d2e47c"; + }; + + propagatedBuildInputs = [ itsdangerous ]; + checkInputs = [ pytestCheckHook requests hypothesis pytest-timeout ]; + + disabledTests = lib.optionals stdenv.isDarwin [ + "test_get_machine_id" + ]; + + meta = with lib; { + homepage = "https://palletsprojects.com/p/werkzeug/"; + description = "A WSGI utility library for Python"; + license = licenses.bsd3; + maintainers = [ ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/werkzeug/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/werkzeug/default.nix index 73bebd8366..d3dce5018d 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/werkzeug/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/werkzeug/default.nix @@ -1,30 +1,57 @@ -{ lib, stdenv, buildPythonPackage, fetchPypi -, itsdangerous, hypothesis -, pytestCheckHook, requests +{ lib +, stdenv +, buildPythonPackage +, pythonOlder +, fetchPypi +, watchdog +, dataclasses , pytest-timeout -, isPy3k +, pytest-xprocess +, pytestCheckHook }: buildPythonPackage rec { pname = "Werkzeug"; - version = "1.0.1"; + version = "2.0.1"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "6c80b1e5ad3665290ea39320b91e1be1e0d5f60652b964a3070216de83d2e47c"; + sha256 = "0hlwawnn8c41f254qify5jnjj8xb97n294h09bqimzqhs0qdpq8x"; }; - propagatedBuildInputs = [ itsdangerous ]; - checkInputs = [ pytestCheckHook requests hypothesis pytest-timeout ]; + propagatedBuildInputs = lib.optionals (!stdenv.isDarwin) [ + # watchdog requires macos-sdk 10.13+ + watchdog + ] ++ lib.optionals (pythonOlder "3.7") [ + dataclasses + ]; + + checkInputs = [ + pytest-timeout + pytest-xprocess + pytestCheckHook + ]; disabledTests = lib.optionals stdenv.isDarwin [ "test_get_machine_id" ]; + pytestFlagsArray = [ + # don't run tests that are marked with filterwarnings, they fail with + # warnings._OptionError: unknown warning category: 'pytest.PytestUnraisableExceptionWarning' + "-m 'not filterwarnings'" + ]; + meta = with lib; { homepage = "https://palletsprojects.com/p/werkzeug/"; - description = "A WSGI utility library for Python"; + description = "The comprehensive WSGI web application library"; + longDescription = '' + Werkzeug is a comprehensive WSGI web application library. It + began as a simple collection of various utilities for WSGI + applications and has become one of the most advanced WSGI + utility libraries. + ''; license = licenses.bsd3; - maintainers = [ ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/west/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/west/default.nix index 6b93750931..fff9582e0b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/west/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/west/default.nix @@ -3,14 +3,14 @@ }: buildPythonPackage rec { - version = "0.10.1"; + version = "0.11.0"; pname = "west"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "sha256-gwbrxnQ0j0FV2Cv+hQEoK0HthstEw/xjaozPjgV7GEc="; + sha256 = "67fdc85f44be308383b331940dced0756c8c81a85f753c6b97eb0d65d973f31a"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/whisper/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/whisper/default.nix index 7b084c1626..d25053f123 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/whisper/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/whisper/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "whisper"; - version = "1.1.7"; + version = "1.1.8"; src = fetchPypi { inherit pname version; - sha256 = "08biw3g6x6p2aa1nlvfazbgcs1xvf6m0hvskdjhgwnsbwxk1xq46"; + sha256 = "345f35d0dccaf181e0aa4353e6c13f40f5cceda10a3c7021dafab29f004f62ae"; }; propagatedBuildInputs = [ six ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/wled/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/wled/default.nix index 92dbc210c6..6f06c8dba9 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/wled/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/wled/default.nix @@ -4,6 +4,7 @@ , fetchFromGitHub , aiohttp , backoff +, poetry-core , packaging , yarl , aresponses @@ -13,16 +14,21 @@ buildPythonPackage rec { pname = "wled"; - version = "0.4.4"; - disabled = pythonOlder "3.7"; + version = "0.6.0"; + disabled = pythonOlder "3.8"; + format = "pyproject"; src = fetchFromGitHub { owner = "frenck"; repo = "python-wled"; rev = "v${version}"; - sha256 = "1adh23v4c9kia3ddqdq0brksd5rhgh4ff7l5hil8klx4dmkrjfz3"; + sha256 = "sha256-aFBcSGPCT49TbqzjUv/d8agdPOCC090rNxDnE9y91Pk="; }; + nativeBuildInputs = [ + poetry-core + ]; + propagatedBuildInputs = [ aiohttp backoff @@ -36,6 +42,13 @@ buildPythonPackage rec { pytestCheckHook ]; + postPatch = '' + # Upstream doesn't set a version for the pyproject.toml + substituteInPlace pyproject.toml \ + --replace "0.0.0" "${version}" \ + --replace "--cov" "" + ''; + pythonImportsCheck = [ "wled" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/wurlitzer/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/wurlitzer/default.nix index e6897830fb..f37d6de135 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/wurlitzer/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/wurlitzer/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "wurlitzer"; - version = "2.0.1"; + version = "2.1.0"; src = fetchPypi { inherit pname version; - sha256 = "0hvmbc41kdwrjns8z1s4a59a4azdvzb8q3vs7nn1li4qm4l0g3yh"; + sha256 = "0144228960a992ef46e339e8aa560600bd34cd64e018bfebad88c0dd61bd8ba5"; }; propagatedBuildInputs = lib.optionals isPy27 [ selectors2 ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/wxPython/4.0.nix b/third_party/nixpkgs/pkgs/development/python-modules/wxPython/4.0.nix index 2fc9a98a26..3a86ef4c63 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/wxPython/4.0.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/wxPython/4.0.nix @@ -18,6 +18,8 @@ , AudioToolbox , OpenGL , CoreFoundation +, pillow +, numpy }: buildPythonPackage rec { @@ -42,6 +44,8 @@ buildPythonPackage rec { [ wxGTK.gtk ] ); + propagatedBuildInputs = [ pillow numpy ]; + DOXYGEN = "${doxygen}/bin/doxygen"; preConfigure = lib.optionalString (!stdenv.isDarwin) '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/wxPython/4.1.nix b/third_party/nixpkgs/pkgs/development/python-modules/wxPython/4.1.nix index a86e07729d..89796500e0 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/wxPython/4.1.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/wxPython/4.1.nix @@ -11,6 +11,8 @@ , ncurses , pango , wxGTK +, pillow +, numpy }: let dynamic-linker = stdenv.cc.bintools.dynamicLinker; @@ -36,6 +38,8 @@ buildPythonPackage rec { ncurses ]; + propagatedBuildInputs = [ pillow numpy ]; + DOXYGEN = "${doxygen}/bin/doxygen"; preConfigure = lib.optionalString (!stdenv.isDarwin) '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/xarray/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/xarray/default.nix index e69e144ccf..675461a63c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/xarray/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/xarray/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "xarray"; - version = "0.17.0"; + version = "0.18.2"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "9c2edad2a4e588f9117c666a4249920b9717fb75703b96998cf65fcd4f60551f"; + sha256 = "5d2e72a228286fcf60f66e16876bd27629a1a70bf64822c565f16515c4d10284"; }; nativeBuildInputs = [ setuptools-scm ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/xbox-webapi/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/xbox-webapi/default.nix new file mode 100644 index 0000000000..b16a87e2fd --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/xbox-webapi/default.nix @@ -0,0 +1,53 @@ +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, aiohttp +, appdirs +, ecdsa +, ms-cv +, pydantic +, aresponses +, pytest-asyncio +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "xbox-webapi"; + version = "2.0.11"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "OpenXbox"; + repo = "xbox-webapi-python"; + rev = "v${version}"; + sha256 = "0li0bq914xizx9fj49s1iwfrv4bpzvl74bwsi5a34r9yizw02cvz"; + }; + + postPatch = '' + substituteInPlace setup.py \ + --replace "pytest-runner" "" + ''; + + propagatedBuildInputs = [ + aiohttp + appdirs + ecdsa + ms-cv + pydantic + ]; + + checkInputs = [ + aresponses + pytest-asyncio + pytestCheckHook + ]; + + meta = with lib; { + description = "Library to authenticate with Windows Live/Xbox Live and use their API"; + homepage = "https://github.com/OpenXbox/xbox-webapi-python"; + license = licenses.mit; + maintainers = with maintainers; [ dotlambda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/xknx/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/xknx/default.nix index 2d565c0eac..0a8da94e52 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/xknx/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/xknx/default.nix @@ -11,14 +11,14 @@ buildPythonPackage rec { pname = "xknx"; - version = "0.18.3"; + version = "0.18.7"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "XKNX"; repo = pname; rev = version; - sha256 = "sha256-IXzmVAxxFOfU8ptixZLeyM64Fm1xSIlEDbR09f77JKM="; + sha256 = "17w6a4ci4w6ggxpa99197f84awd116ygzd3fa5cvn1a7221dvdj4"; }; propagatedBuildInputs = [ @@ -43,5 +43,6 @@ buildPythonPackage rec { homepage = "https://github.com/XKNX/xknx"; license = with licenses; [ mit ]; maintainers = with maintainers; [ fab ]; + platforms = platforms.linux; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/xlsx2csv/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/xlsx2csv/default.nix index 47576e6ee6..e22c0d9659 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/xlsx2csv/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/xlsx2csv/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "xlsx2csv"; - version = "0.7.7"; + version = "0.7.8"; src = fetchPypi { inherit pname version; - sha256 = "09vigknmz15izirfddkmb3a39h1rp2jmc00bnrff12i757n7jjl4"; + sha256 = "c3aaf0c5febd9c5e48488026e7a58af37a67bf3da5e221cc57d371328b3b7dd3"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/xml2rfc/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/xml2rfc/default.nix index 5b50716f2f..9837128a7f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/xml2rfc/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/xml2rfc/default.nix @@ -4,12 +4,12 @@ buildPythonPackage rec { pname = "xml2rfc"; - version = "3.6.0"; + version = "3.8.0"; disabled = pythonAtLeast "3.9"; src = fetchPypi { inherit pname version; - sha256 = "a9aa2e7c156a1acb0931086637d31efe9302a771641bc35938383cefbd27ba9d"; + sha256 = "8e25a9d73acf57ade798fc67841277dbbdb81ced390e6f84362370305b127426"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/xmlschema/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/xmlschema/default.nix index 7008814ba2..6c2118f391 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/xmlschema/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/xmlschema/default.nix @@ -5,14 +5,14 @@ }: buildPythonPackage rec { - version = "1.6.2"; + version = "1.6.4"; pname = "xmlschema"; src = fetchFromGitHub { owner = "sissaschool"; repo = "xmlschema"; rev = "v${version}"; - sha256 = "sha256-GL2PlHxKDSEsZwHPBAy+tjBSbKyvlbXUWwXakKPmzSs="; + sha256 = "sha256-0KVGu163t3stCgx7aWW/Ggf6CUW2ZhOOnPU6FfGHfKA="; }; propagatedBuildInputs = [ elementpath ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/xmlsec/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/xmlsec/default.nix index 82f4a968ba..b8c60f1b64 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/xmlsec/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/xmlsec/default.nix @@ -16,11 +16,11 @@ buildPythonPackage rec { pname = "xmlsec"; - version = "1.3.9"; + version = "1.3.11"; src = fetchPypi { inherit pname version; - sha256 = "1c4k42zv3plm6v65p7z6l5rxyf50h40d02nhc16vq7cjrfvdf4rx"; + sha256 = "sha256-zS6q/38xeEoH3ZnOgfp2cxPfO6GDT6pBQ+4sBwAMrHo="; }; # https://github.com/mehcode/python-xmlsec/issues/84#issuecomment-632930116 @@ -38,6 +38,8 @@ buildPythonPackage rec { checkInputs = [ pytestCheckHook hypothesis ]; disabledTestPaths = [ "tests/test_doc_examples.py" ]; + pythonImportsCheck = [ "xmlsec" ]; + meta = with lib; { description = "Python bindings for the XML Security Library"; homepage = "https://github.com/mehcode/python-xmlsec"; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/xstatic-pygments/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/xstatic-pygments/default.nix index 8542747d2d..68fc2339f5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/xstatic-pygments/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/xstatic-pygments/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "XStatic-Pygments"; - version = "2.7.2.1"; + version = "2.9.0.1"; src = fetchPypi { inherit version pname; - sha256 = "b22b0a59ce17bf06e26508fdd264fff74409ebd9968af87a0a63402fce838dc2"; + sha256 = "082c1e9fe606fbbef474f78b6fdb19e9a2efcc7a9b7d94163cf66f7bfae75762"; }; # no tests implemented diff --git a/third_party/nixpkgs/pkgs/development/python-modules/xtensor-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/xtensor-python/default.nix new file mode 100644 index 0000000000..7d973c0906 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/xtensor-python/default.nix @@ -0,0 +1,40 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, cmake +, gtest +, xtensor +, pybind11 +, numpy +}: + +buildPythonPackage rec { + pname = "xtensor-python"; + version = "0.25.1"; + + src = fetchFromGitHub { + owner = "xtensor-stack"; + repo = pname; + rev = version; + sha256 = "17la76hn4r1jv67dzz8x2pzl608r0mnvz854407mchlzj6rhsxza"; + }; + + nativeBuildInputs = [ cmake pybind11 ]; + + propagatedBuildInputs = [ xtensor numpy ]; + + dontUseSetuptoolsBuild = true; + dontUsePipInstall = true; + dontUseSetuptoolsCheck = true; + + checkInputs = [ + gtest + ]; + + meta = with lib; { + homepage = "https://github.com/xtensor-stack/xtensor-python"; + description = "Python bindings for the xtensor C++ multi-dimensional array library"; + license = licenses.bsd3; + maintainers = with maintainers; [ lsix ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/xxhash/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/xxhash/default.nix index 08bcfcdacd..df3c0c8526 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/xxhash/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/xxhash/default.nix @@ -4,12 +4,12 @@ }: buildPythonPackage rec { - version = "2.0.0"; + version = "2.0.2"; pname = "xxhash"; src = fetchPypi { inherit pname version; - sha256 = "58ca818554c1476fa1456f6cd4b87002e2294f09baf0f81e5a2a4968e62c423c"; + sha256 = "b7bead8cf6210eadf9cecf356e17af794f57c0939a3d420a00d87ea652f87b49"; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/python-modules/yamllint/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/yamllint/default.nix index 2178e4d257..832eb3f6b5 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/yamllint/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/yamllint/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "yamllint"; - version = "1.26.0"; + version = "1.26.1"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "11qhs1jk9pwvyk5k3q5blh9sq42dh1ywdf1f3i2zixf7hncwir5h"; + sha256 = "sha256-h9lGKz7X6d+hnKoXf3p3zZiIs9xARER9auCrIzvNEyQ="; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/yangson/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/yangson/default.nix index 44ac6cf9fe..1b63a94cb2 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/yangson/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/yangson/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "yangson"; - version = "1.4.8"; + version = "1.4.9"; format = "setuptools"; src = fetchPypi { inherit pname version; - sha256 = "11w4aq0w2rnkz1axgmw003z2snd4kc49dil6kp1ajlqnfh1pcx8m"; + sha256 = "1qb8zssyj504yrj1jnkrzv65xlfv5bl14knan76pjzbpl0xpaq6z"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/yara-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/yara-python/default.nix index 569bf0ef80..fc4c3bb56f 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/yara-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/yara-python/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "yara-python"; - version = "4.0.5"; + version = "4.1.0"; src = fetchFromGitHub { owner = "VirusTotal"; repo = "yara-python"; rev = "v${version}"; - sha256 = "1qd0aw5p48ay77hgj0hgzpvbmq1933mknk134aqdb32036rlc5sq"; + sha256 = "1w48skmjbb5529g8fyzdjj9jkmavqiq6wh1dr004xdp3nhlqn9y7"; }; buildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/youtube-search/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/youtube-search/default.nix new file mode 100644 index 0000000000..41424aa56d --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/python-modules/youtube-search/default.nix @@ -0,0 +1,26 @@ +{ lib, buildPythonPackage, fetchFromGitHub, requests }: + +buildPythonPackage rec { + pname = "youtube-search"; + version = "unstable-2021-02-27"; + + src = fetchFromGitHub { + owner = "joetats"; + repo = "youtube_search"; + rev = "886fe1b16c829215ee0984b6859f874b4a30d875"; + sha256 = "sha256-3ECJ6iHNzx5PLgpTFraFzAYbKnyMYRf/iJ0zajU+hlo="; + }; + + propagatedBuildInputs = [ requests ]; + + # Check disabled due to relative import with no known parent package + doCheck = false; + pythonImportsCheck = [ "youtube_search" ]; + + meta = with lib; { + description = "Tool for searching for youtube videos to avoid using their heavily rate-limited API"; + homepage = "https://github.com/joetats/youtube_search"; + license = licenses.mit; + maintainers = with maintainers; [ j0hax ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/python-modules/yq/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/yq/default.nix index 1dde1405bf..922276e388 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/yq/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/yq/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "yq"; - version = "2.12.0"; + version = "2.12.2"; src = fetchPypi { inherit pname version; - sha256 = "sha256-HSrUA1BNMGtSWLhsaY+YVtetWLe7F6K4dWkaanuMTCA="; + sha256 = "2f156d0724b61487ac8752ed4eaa702a5737b804d5afa46fa55866951cd106d2"; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/yq/jq-path.patch b/third_party/nixpkgs/pkgs/development/python-modules/yq/jq-path.patch index 784a28feaf..ed98ec86aa 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/yq/jq-path.patch +++ b/third_party/nixpkgs/pkgs/development/python-modules/yq/jq-path.patch @@ -1,26 +1,26 @@ diff --git a/test/test.py b/test/test.py -index a81f41b..9e80f04 100755 +index f25dced..cd308c8 100755 --- a/test/test.py +++ b/test/test.py -@@ -112,7 +112,7 @@ class TestYq(unittest.TestCase): +@@ -105,7 +105,7 @@ class TestYq(unittest.TestCase): tf2.seek(0) self.assertEqual(self.run_yq("", ["-y", arg, tf.name, self.fd_path(tf2)]), '1\n...\n') - + - @unittest.skipIf(subprocess.check_output(["jq", "--version"]) < b"jq-1.6", "Test options introduced in jq 1.6") + @unittest.skipIf(subprocess.check_output(["@jq@", "--version"]) < b"jq-1.6", "Test options introduced in jq 1.6") def test_jq16_arg_passthrough(self): self.assertEqual(self.run_yq("{}", ["--indentless", "-y", ".a=$ARGS.positional", "--args", "a", "b"]), "a:\n- a\n- b\n") diff --git a/yq/__init__.py b/yq/__init__.py -index afeb42c..a0d7970 100755 +index 91212d0..ee5a799 100755 --- a/yq/__init__.py +++ b/yq/__init__.py @@ -146,7 +146,7 @@ def yq(input_streams=None, output_stream=None, input_format="yaml", output_forma - try: - # Note: universal_newlines is just a way to induce subprocess to make stdin a text buffer and encode it for us + # Notes: universal_newlines is just a way to induce subprocess to make stdin a text buffer and encode it for us; + # close_fds must be false for command substitution to work (yq . t.yml --slurpfile t <(yq . t.yml)) - jq = subprocess.Popen(["jq"] + list(jq_args), + jq = subprocess.Popen(["@jq@"] + list(jq_args), stdin=subprocess.PIPE, stdout=subprocess.PIPE if converting_output else None, - universal_newlines=True) + close_fds=False, diff --git a/third_party/nixpkgs/pkgs/development/python-modules/zarr/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/zarr/default.nix index 5c43494d28..c7990de55e 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/zarr/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/zarr/default.nix @@ -12,12 +12,12 @@ buildPythonPackage rec { pname = "zarr"; - version = "2.6.1"; + version = "2.8.3"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "fa7eac1e4ff47ff82d09c42bb4679e18e8a05a73ee81ce59cee6a441a210b2fd"; + sha256 = "8aece33269ba3ee2af9320aa528d5fe93f76c30e4ad7fdbfb604b1db3f0d779f"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/python-modules/zeep/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/zeep/default.nix index 50dda4c8ed..7c72d25003 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/zeep/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/zeep/default.nix @@ -1,85 +1,85 @@ -{ fetchPypi -, lib -, fetchpatch -, buildPythonPackage -, isPy3k +{ lib +, aiohttp +, aioresponses , appdirs , attrs +, buildPythonPackage , cached-property , defusedxml +, fetchFromGitHub +, freezegun +, httpx , isodate , lxml -, requests -, requests_toolbelt -, six -, pytz -, tornado -, aiohttp -# test dependencies -, freezegun , mock , pretend -, pytest -, pytestcov +, pytest-asyncio +, pytest-httpx +, pytestCheckHook +, pythonOlder +, pytz +, requests +, requests_toolbelt +, requests-file , requests-mock -, aioresponses +, xmlsec }: buildPythonPackage rec { pname = "zeep"; - version = "3.4.0"; + version = "4.0.0"; + disabled = pythonOlder "3.6"; - src = fetchPypi { - inherit pname version; - sha256 = "0e98669cfeb60756231ae185498f9ae21b30b2681786b8de58ed34c3b93e41dd"; + src = fetchFromGitHub { + owner = "mvantellingen"; + repo = "python-zeep"; + rev = version; + sha256 = "1rwmwk47fxs8dxwv5dr6gbnbiyilznifb47fhbxgzj231w0y82cm"; }; - patches = [ - ( fetchpatch { - url = "https://github.com/mvantellingen/python-zeep/pull/1006/commits/ba7edd6bf2b31023b31e8f17c161e1d6d5af3d29.patch"; - sha256 = "1j0jd5hmh457im9sbawaqf6pnfy36fhr9wqdim8wk5da9ixr0ajs"; - }) - ]; - propagatedBuildInputs = [ appdirs attrs cached-property defusedxml + httpx isodate lxml + pytz requests requests_toolbelt - six - pytz - - # optional requirements - tornado - ] ++ lib.optional isPy3k aiohttp; + requests-file + xmlsec + ]; checkInputs = [ + aiohttp + aioresponses freezegun mock pretend - pytestcov - pytest + pytest-asyncio + pytest-httpx + pytestCheckHook requests-mock - ] ++ lib.optional isPy3k aioresponses; + xmlsec + ]; - checkPhase = '' - runHook preCheck - # fix compatibility with pytest 4 - substituteInPlace tests/conftest.py \ - --replace 'request.node.get_marker("requests")' 'request.node.get_closest_marker("requests")' - # ignored tests requires xmlsec python module - HOME=$(mktemp -d) pytest tests --ignore tests/test_wsse_signature.py - runHook postCheck + preCheck = '' + export HOME=$(mktemp -d); ''; + disabledTests = [ + # lxml.etree.XMLSyntaxError: Extra content at the end of the document, line 2, column 64 + "test_mime_content_serialize_text_xml" + ]; + + pythonImportsCheck = [ "zeep" ]; + meta = with lib; { + description = "Python SOAP client"; homepage = "http://docs.python-zeep.org"; license = licenses.mit; - description = "A modern/fast Python SOAP client based on lxml / requests"; maintainers = with maintainers; [ rvl ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/python-modules/zope_interface/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/zope_interface/default.nix index 15a179c0d6..c1f61a4cbe 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/zope_interface/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/zope_interface/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "zope.interface"; - version = "5.3.0"; + version = "5.4.0"; src = fetchPypi { inherit pname version; - sha256 = "b18a855f8504743e0a2d8b75d008c7720d44e4c76687e13f959e35d9a13eb397"; + sha256 = "5dba5f530fec3f0988d83b78cc591b58c0b6eb8431a85edd1569a0539a8a5a0e"; }; propagatedBuildInputs = [ zope_event ]; diff --git a/third_party/nixpkgs/pkgs/development/python-modules/zstd/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/zstd/default.nix index 1d8fa8d93e..e7ee8dd68c 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/zstd/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/zstd/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "zstd"; - version = "1.4.8.1"; + version = "1.5.0.2"; src = fetchPypi { inherit pname version; - sha256 = "b62b21eb850abd6b8c0046bfc1c5c773c873eeb94f1904ef1ff304e98b62b80e"; + sha256 = "8d3388a15135c481b28ca67d079cb5fd79a9691626fd9979e6b4ec00eabb9e79"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/python-modules/zwave-js-server-python/default.nix b/third_party/nixpkgs/pkgs/development/python-modules/zwave-js-server-python/default.nix index f11ff6bece..2976c5e24b 100644 --- a/third_party/nixpkgs/pkgs/development/python-modules/zwave-js-server-python/default.nix +++ b/third_party/nixpkgs/pkgs/development/python-modules/zwave-js-server-python/default.nix @@ -9,7 +9,7 @@ buildPythonPackage rec { pname = "zwave-js-server-python"; - version = "0.25.0"; + version = "0.26.1"; disabled = pythonOlder "3.8"; @@ -17,7 +17,7 @@ buildPythonPackage rec { owner = "home-assistant-libs"; repo = pname; rev = version; - sha256 = "sha256-frhmyla3neFVZILDy7HnKloMqNLRjm3gxS88xZdu29w="; + sha256 = "1rh6wim5hr9lygvgria7lr6x61sdyrv3drrrirgv9p9gl3rxcj6m"; }; propagatedBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/r-modules/bioc-annotation-packages.nix b/third_party/nixpkgs/pkgs/development/r-modules/bioc-annotation-packages.nix index 372f1438eb..f2ecc3e7df 100644 --- a/third_party/nixpkgs/pkgs/development/r-modules/bioc-annotation-packages.nix +++ b/third_party/nixpkgs/pkgs/development/r-modules/bioc-annotation-packages.nix @@ -4,12 +4,13 @@ # Rscript generate-r-packages.R bioc-annotation >new && mv new bioc-annotation-packages.nix { self, derive }: -let derive2 = derive { biocVersion = "3.11"; }; +let derive2 = derive { biocVersion = "3.12"; }; in with self; { AHCytoBands = derive2 { name="AHCytoBands"; version="0.99.0"; sha256="0g92nz33rx14zl5can7s701bipdgz7rxqygvvc22c4a0qj52ijnq"; depends=[]; }; - AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.15"; sha256="0by0y2nyqhihpwzm36lggkc0dqvxz22k6ck1wcmrf7sck8xg54ji"; depends=[AnnotationHubData ensembldb]; }; - BSgenome_Alyrata_JGI_v1 = derive2 { name="BSgenome.Alyrata.JGI.v1"; version="1.0.0"; sha256="06549kkzy36n378zb61lrf9zardncp7i20r73rmmiq1pnfjp3gww"; depends=[BSgenome]; }; + AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.18"; sha256="08n2p2xm7s75q5ps4w9dqg4p3w3baz187n3s5g8rpmd5d2i4zy8r"; depends=[AnnotationHubData ensembldb]; }; + BSgenome_Alyrata_JGI_v1 = derive2 { name="BSgenome.Alyrata.JGI.v1"; version="1.0.1"; sha256="062ap94m6s4w8clg1zlj223wmgbmq19yhksx9fcdcqrxr5kbfv85"; depends=[BSgenome]; }; BSgenome_Amellifera_BeeBase_assembly4 = derive2 { name="BSgenome.Amellifera.BeeBase.assembly4"; version="1.4.0"; sha256="02zs16q441zcbfp7xvv1gny5nn02ivfr8md1wh5s5rpnj6sdl6kj"; depends=[BSgenome]; }; + BSgenome_Amellifera_NCBI_AmelHAv3_1 = derive2 { name="BSgenome.Amellifera.NCBI.AmelHAv3.1"; version="1.5.0"; sha256="1cglml4rlqr5hmf4dx51grx6s25h6xc3lqv569nx2sl4gdz28s47"; depends=[BSgenome]; }; BSgenome_Amellifera_UCSC_apiMel2 = derive2 { name="BSgenome.Amellifera.UCSC.apiMel2"; version="1.4.0"; sha256="1967w7aly7qydykk7rar712kvgsav3zjr4kirybkj17nwiynd74g"; depends=[BSgenome]; }; BSgenome_Amellifera_UCSC_apiMel2_masked = derive2 { name="BSgenome.Amellifera.UCSC.apiMel2.masked"; version="1.3.99"; sha256="128jmpnpbz1afqvhvdc9vrc8gmlyg26ca7qz362qsx89jrm4khpr"; depends=[BSgenome BSgenome_Amellifera_UCSC_apiMel2]; }; BSgenome_Aofficinalis_NCBI_V1 = derive2 { name="BSgenome.Aofficinalis.NCBI.V1"; version="1.0.0"; sha256="0n6m5jnpiz6bv46b7s396qkxha2d8271j747j50v2zb6a7wd0rjr"; depends=[BSgenome]; }; @@ -33,6 +34,7 @@ in with self; { BSgenome_Cfamiliaris_UCSC_canFam3 = derive2 { name="BSgenome.Cfamiliaris.UCSC.canFam3"; version="1.4.0"; sha256="1ir092yh1h03ag1lnj2rh5hjp2mqrw7fcyb6mqyjm0h8g1pmpicr"; depends=[BSgenome]; }; BSgenome_Cfamiliaris_UCSC_canFam3_masked = derive2 { name="BSgenome.Cfamiliaris.UCSC.canFam3.masked"; version="1.3.99"; sha256="07y28g6b4sbp38yg5rwldda7s1cwcpil6rzsb4csskvs0xi5286l"; depends=[BSgenome BSgenome_Cfamiliaris_UCSC_canFam3]; }; BSgenome_Cjacchus_UCSC_calJac3 = derive2 { name="BSgenome.Cjacchus.UCSC.calJac3"; version="1.4.2"; sha256="1s1srg6lr3dndbpv83bqlxz5lhyhxh431yrd919yl4fwmr5rvx0z"; depends=[BSgenome]; }; + BSgenome_Creinhardtii_JGI_v5_6 = derive2 { name="BSgenome.Creinhardtii.JGI.v5.6"; version="1.5.0"; sha256="0px1p3hgbpk3pvmg77knqxwmh1jd8jjf763kzxf0725pnl9dca2v"; depends=[BSgenome]; }; BSgenome_Dmelanogaster_UCSC_dm2 = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm2"; version="1.4.0"; sha256="1vnqbm1123zmpn1iwyygr1p4js0j6vifyz7iwzgkiw543yb1mwnl"; depends=[BSgenome]; }; BSgenome_Dmelanogaster_UCSC_dm2_masked = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm2.masked"; version="1.3.99"; sha256="1qclf62c3qrdhnrb6p4rhj7wrarlsbm716d37k0gbdzkfm2vhyr7"; depends=[BSgenome BSgenome_Dmelanogaster_UCSC_dm2]; }; BSgenome_Dmelanogaster_UCSC_dm3 = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm3"; version="1.4.0"; sha256="19bm3lkhhkag3gnwp419211fh0cnr0x6fa0r1lr0ycwrikxdxsv8"; depends=[BSgenome]; }; @@ -81,7 +83,9 @@ in with self; { BSgenome_Mmusculus_UCSC_mm8_masked = derive2 { name="BSgenome.Mmusculus.UCSC.mm8.masked"; version="1.3.99"; sha256="1a2ywmy96cbwmvbdid73c0kln56qrbd7ipfzkzl97f56k3g985j5"; depends=[BSgenome BSgenome_Mmusculus_UCSC_mm8]; }; BSgenome_Mmusculus_UCSC_mm9 = derive2 { name="BSgenome.Mmusculus.UCSC.mm9"; version="1.4.0"; sha256="1birqw30g2azimxpnjfzmkphan7x131yy8b9h85lfz5fjdg7841i"; depends=[BSgenome]; }; BSgenome_Mmusculus_UCSC_mm9_masked = derive2 { name="BSgenome.Mmusculus.UCSC.mm9.masked"; version="1.3.99"; sha256="00bpbm3havqcxr4g63zhllsbpd9q6svgihks7qp7x73nm4gvq7fn"; depends=[BSgenome BSgenome_Mmusculus_UCSC_mm9]; }; - BSgenome_Osativa_MSU_MSU7 = derive2 { name="BSgenome.Osativa.MSU.MSU7"; version="0.99.1"; sha256="0da1xcxxgij04cf5gri43sprbbm9nq790phcfqcvc00mv7q78cpn"; depends=[BSgenome]; }; + BSgenome_Osativa_MSU_MSU7 = derive2 { name="BSgenome.Osativa.MSU.MSU7"; version="0.99.2"; sha256="1rppki62c916drc24jd2j1cmbhn3x316z16123gc654wj1c5s9vi"; depends=[BSgenome]; }; + BSgenome_Ppaniscus_UCSC_panPan1 = derive2 { name="BSgenome.Ppaniscus.UCSC.panPan1"; version="1.4.3"; sha256="0schlki35jmv678hgxv7jmrcmbv2wixqhpk18awpr2pwq2j1ahmc"; depends=[BSgenome]; }; + BSgenome_Ppaniscus_UCSC_panPan2 = derive2 { name="BSgenome.Ppaniscus.UCSC.panPan2"; version="1.4.3"; sha256="0jbxfix328qzsd94vjh7dlnzpygkdwbglcn4d1pdivm43ggww10a"; depends=[BSgenome]; }; BSgenome_Ptroglodytes_UCSC_panTro2 = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro2"; version="1.4.0"; sha256="14yvajlldr3qhclg9n2j48q60rgbz6x1ypgzd6dgf4c6jxl90p0q"; depends=[BSgenome]; }; BSgenome_Ptroglodytes_UCSC_panTro2_masked = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro2.masked"; version="1.3.99"; sha256="1dy1bf6rsmzv6qj9d2a1sz56w33pk63g3qxm8znfdw11hmdbq9m1"; depends=[BSgenome BSgenome_Ptroglodytes_UCSC_panTro2]; }; BSgenome_Ptroglodytes_UCSC_panTro3 = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro3"; version="1.4.0"; sha256="1vbfx0zrj4rcwcsm1q09xdiv0mmrycj8223lnxqb8nr5r017f7gm"; depends=[BSgenome]; }; @@ -99,7 +103,7 @@ in with self; { BSgenome_Sscrofa_UCSC_susScr11 = derive2 { name="BSgenome.Sscrofa.UCSC.susScr11"; version="1.4.2"; sha256="0m7c2r74qp3rjnkxxyz18gd8xjk2f3cp1cr07bwd8v60mvgdn8cq"; depends=[BSgenome]; }; BSgenome_Sscrofa_UCSC_susScr3 = derive2 { name="BSgenome.Sscrofa.UCSC.susScr3"; version="1.4.0"; sha256="0l70arnpshiviq3xj61fw87dhf8sggq6k1yryagbhdb40d5cq8lq"; depends=[BSgenome]; }; BSgenome_Sscrofa_UCSC_susScr3_masked = derive2 { name="BSgenome.Sscrofa.UCSC.susScr3.masked"; version="1.3.99"; sha256="0ym82vysn131anp8zmmkgyx6zmyh44am5i1m3j9kj5lvq874ycha"; depends=[BSgenome BSgenome_Sscrofa_UCSC_susScr3]; }; - BSgenome_Tgondii_ToxoDB_7_0 = derive2 { name="BSgenome.Tgondii.ToxoDB.7.0"; version="0.99.0"; sha256="1ilpfd66hn0qh1dkj9l8wkddym9d320blwj5hx0x7dq92bnzs98v"; depends=[BSgenome]; }; + BSgenome_Tgondii_ToxoDB_7_0 = derive2 { name="BSgenome.Tgondii.ToxoDB.7.0"; version="0.99.1"; sha256="1naxnls0r1r6csfs88mmjnfa7nmsgjx5lngn1ln4llragjrqnngm"; depends=[BSgenome]; }; BSgenome_Tguttata_UCSC_taeGut1 = derive2 { name="BSgenome.Tguttata.UCSC.taeGut1"; version="1.4.0"; sha256="0v8g4q64pj4mxr8wzyxm9w2d2lyzq1qzl5yvh2dvwpqnghicj10v"; depends=[BSgenome]; }; BSgenome_Tguttata_UCSC_taeGut1_masked = derive2 { name="BSgenome.Tguttata.UCSC.taeGut1.masked"; version="1.3.99"; sha256="05g9qp2vkp8ia6kqgy07ihnr1w1ca8c96rg7vfahh2nsr5j6ymba"; depends=[BSgenome BSgenome_Tguttata_UCSC_taeGut1]; }; BSgenome_Tguttata_UCSC_taeGut2 = derive2 { name="BSgenome.Tguttata.UCSC.taeGut2"; version="1.4.2"; sha256="1ikbd5q77l2zmbmbm511s41h00627zi0gq31cm4qr3k1cvlz8617"; depends=[BSgenome]; }; @@ -116,8 +120,8 @@ in with self; { EnsDb_Mmusculus_v79 = derive2 { name="EnsDb.Mmusculus.v79"; version="2.99.0"; sha256="1zpmq7v55if6q9r0h883q9k8l70ym20b01m9hxf121wb256rl9f7"; depends=[ensembldb]; }; EnsDb_Rnorvegicus_v75 = derive2 { name="EnsDb.Rnorvegicus.v75"; version="2.99.0"; sha256="02sx9l1p67ihkn0dfzbi08cpp8x4k2mjdqn7hvzfiaibsbqp70bb"; depends=[ensembldb]; }; EnsDb_Rnorvegicus_v79 = derive2 { name="EnsDb.Rnorvegicus.v79"; version="2.99.0"; sha256="1ki2hrn0a55f3ipxny0hpgl5ld9pjkhcwmvvqwwd99f3sqbxf3br"; depends=[ensembldb]; }; - EpiTxDb_Hs_hg38 = derive2 { name="EpiTxDb.Hs.hg38"; version="0.99.3"; sha256="0hy1kjl2apzxpmg4a6yyg8c2j5ljphmjlm1in9b8g0ny1fjw4nci"; depends=[AnnotationHub EpiTxDb]; }; - EpiTxDb_Mm_mm10 = derive2 { name="EpiTxDb.Mm.mm10"; version="0.99.4"; sha256="0n0g2spy89fz1632vj9lj0b072rjbixcxnfwgf6sdzp12lhsc60z"; depends=[AnnotationHub EpiTxDb]; }; + EpiTxDb_Hs_hg38 = derive2 { name="EpiTxDb.Hs.hg38"; version="0.99.7"; sha256="1vsi24q902wqlnbxp8hks03x53n4yh5cmpyyxdvmxfbn1rxfvnyf"; depends=[AnnotationHub EpiTxDb]; }; + EpiTxDb_Mm_mm10 = derive2 { name="EpiTxDb.Mm.mm10"; version="0.99.6"; sha256="16zsqnrb3ypwv0sqfmhqmkxqhp90k21in7bjhjf0zagywsyyhpww"; depends=[AnnotationHub EpiTxDb]; }; EpiTxDb_Sc_sacCer3 = derive2 { name="EpiTxDb.Sc.sacCer3"; version="0.99.3"; sha256="0fdyzxfkdi9x2hbpw1q5g0wm8qwzgbzqdqh2nampdisrbfr73amm"; depends=[AnnotationHub EpiTxDb]; }; EuPathDB = derive2 { name="EuPathDB"; version="1.0.1"; sha256="0k23f34hnvcf2ig9sic7gf7pypc2jmwymg605qym7x32bjhi6rlm"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDbData GenomicRanges]; }; FDb_FANTOM4_promoters_hg19 = derive2 { name="FDb.FANTOM4.promoters.hg19"; version="1.0.0"; sha256="04sn5x1r5fcbghzw6n1bvy0z8zyhrbk86wsqz1p5gk665vicz8rw"; depends=[AnnotationDbi Biostrings GenomicFeatures]; }; @@ -127,8 +131,8 @@ in with self; { FDb_UCSC_snp137common_hg19 = derive2 { name="FDb.UCSC.snp137common.hg19"; version="1.0.0"; sha256="1q1r7rk29q0zlzxz6fvfy1kjfli6wxzvhvhhfnf3z4ksy5332q63"; depends=[AnnotationDbi GenomicFeatures]; }; FDb_UCSC_tRNAs = derive2 { name="FDb.UCSC.tRNAs"; version="1.0.1"; sha256="1dymdalx9fzrplxyc0fd9faa4r5jimi7zyry9k65lyz1pabpkwqz"; depends=[AnnotationDbi GenomicFeatures]; }; GGHumanMethCancerPanelv1_db = derive2 { name="GGHumanMethCancerPanelv1.db"; version="1.4.1"; sha256="0ag1pkbh4mx4aplfrrz1q4f4cl05mczq9pcsfkd1071qk51dcwvx"; depends=[AnnotationDbi AnnotationForge org_Hs_eg_db]; }; - GO_db = derive2 { name="GO.db"; version="3.11.4"; sha256="1sfrjgf013cwsll85p1q1idc2r6qjx2shsxgv33d9mw5kai4di2k"; depends=[AnnotationDbi]; }; - GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.2.3"; sha256="1swaqygs0hpgrxcggwjhz9y5j9yqxb85pncsr17r3rrcaky7jpcl"; depends=[]; }; + GO_db = derive2 { name="GO.db"; version="3.12.1"; sha256="1ffsf7cnfi3jlwbpkbayw59wwkzpvw9p929c8gwrc86ksdcnjcg0"; depends=[AnnotationDbi]; }; + GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.2.4"; sha256="0wi92x3cgf8wgik67g863y53k097hr9cjh06s2dqayivs3hwx7ls"; depends=[]; }; GenomicState = derive2 { name="GenomicState"; version="0.99.9"; sha256="0qpa77bsycm3y82jrxq7r27gsygb1qbhkakz3cln3jv3sfkf0aj7"; depends=[AnnotationDbi AnnotationHub bumphunter derfinder GenomeInfoDb GenomicFeatures IRanges org_Hs_eg_db rtracklayer]; }; Homo_sapiens = derive2 { name="Homo.sapiens"; version="1.3.1"; sha256="151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01"; depends=[AnnotationDbi GenomicFeatures GO_db org_Hs_eg_db OrganismDbi TxDb_Hsapiens_UCSC_hg19_knownGene]; }; Hs6UG171_db = derive2 { name="Hs6UG171.db"; version="3.2.3"; sha256="034aady3hy8j9bm7pbl8l8h0gcfnzmpyxg9l9s1ky0pj7ryzr93a"; depends=[AnnotationDbi org_Hs_eg_db]; }; @@ -153,18 +157,18 @@ in with self; { JazaeriMetaData_db = derive2 { name="JazaeriMetaData.db"; version="3.2.3"; sha256="04lvcmm4ybxkfwgbiwcnpyj6kpbd0gd7jz6ijlbbvv6zdgdmvykb"; depends=[AnnotationDbi org_Hs_eg_db]; }; KEGG_db = derive2 { name="KEGG.db"; version="3.2.4"; sha256="125dksxg6jx0mh6zfl0icnjca1j7j0i3ml8fq0f4klfbcjvd2q1f"; depends=[AnnotationDbi]; }; LAPOINTE_db = derive2 { name="LAPOINTE.db"; version="3.2.3"; sha256="0960gy5p4ybs5zs6251cgc3nk5a9gsh1nh23gkbkr3gc8jddinfm"; depends=[AnnotationDbi org_Hs_eg_db]; }; - LRBase_Ath_eg_db = derive2 { name="LRBase.Ath.eg.db"; version="1.2.0"; sha256="1y2dgmqhv0x4ydvxq6dcg5m0gzcvlzb9jq4hs3axdyy8d62i8flh"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Bta_eg_db = derive2 { name="LRBase.Bta.eg.db"; version="1.2.0"; sha256="04z4fmfyl1k6m3paab6ip9h015q90xpxxn5lccm03k3pcv7wf5mh"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Cel_eg_db = derive2 { name="LRBase.Cel.eg.db"; version="1.2.0"; sha256="1kdcm469qkvncw92c5wjlgnfc9fnqpn15nc124zv0ykpx34fd922"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Dme_eg_db = derive2 { name="LRBase.Dme.eg.db"; version="1.2.0"; sha256="1amsik0g0pl72jfi8v9jnqpfs8rdsrq1ybly79lyhq1rpdjicayk"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Dre_eg_db = derive2 { name="LRBase.Dre.eg.db"; version="1.2.0"; sha256="16c0fcw6y4nqgvwzx3v8h822dbw3cbmb8h4sd7g9zwmylibbl35g"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Gga_eg_db = derive2 { name="LRBase.Gga.eg.db"; version="1.2.0"; sha256="1rdamsg3gikh22sfkafacl0b8507z5hk28j1vcaxdscrwwyrc6bz"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Hsa_eg_db = derive2 { name="LRBase.Hsa.eg.db"; version="1.2.0"; sha256="1qdyh4i016i40zn72h1x7194x1wi8pddl6cyln658k334p60x86l"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Mmu_eg_db = derive2 { name="LRBase.Mmu.eg.db"; version="1.2.0"; sha256="1viw7vhy3m7b7fwkm38y7f26bzywl1n2i1cff7mp91czss26bq9s"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Pab_eg_db = derive2 { name="LRBase.Pab.eg.db"; version="1.2.0"; sha256="1s5i4167ygwq35j60ns4f1yf6llasxx6wad61xng5p8lgq3186nr"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Rno_eg_db = derive2 { name="LRBase.Rno.eg.db"; version="1.2.0"; sha256="08xnr1wlg3lkjdmjdvy2i12ki3ym7z4gr3zvyj2ghkyn0gyd73gp"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Ssc_eg_db = derive2 { name="LRBase.Ssc.eg.db"; version="1.2.0"; sha256="0hqns1c4xgay7aagbhl46b9zwf5hp1p33jf9f28l5mxvvc96zrbn"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Xtr_eg_db = derive2 { name="LRBase.Xtr.eg.db"; version="1.2.0"; sha256="0kl6f7a1fxxrchz8s5dsh2vqsa8ckigi4clpnr76qvhlcfn77hk7"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Ath_eg_db = derive2 { name="LRBase.Ath.eg.db"; version="2.0.0"; sha256="13cjh9nrdww0mz6v1187zal9l2q6phicj54b7qcwbxblvz5byakv"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Bta_eg_db = derive2 { name="LRBase.Bta.eg.db"; version="2.0.0"; sha256="094wnmlgq14cdff6pia8dl4y1127fwxn1cn02p6p8db47bh5vv1a"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Cel_eg_db = derive2 { name="LRBase.Cel.eg.db"; version="2.0.0"; sha256="0z9xmws8dw8kzjy4qmnlm46rmzn0a4bqazm4yy6jpyq69iqi7mfp"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Dme_eg_db = derive2 { name="LRBase.Dme.eg.db"; version="2.0.0"; sha256="0zn5mnp7avz0d288ilibg4955cw5g90yk72img5hs9sscc7kl7zk"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Dre_eg_db = derive2 { name="LRBase.Dre.eg.db"; version="2.0.0"; sha256="1kvvyc7rf159npfi93vvng9c6yn33ngpmjqzqxfjanli2wmspc2q"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Gga_eg_db = derive2 { name="LRBase.Gga.eg.db"; version="2.0.0"; sha256="0khgsjsp3bn6j81rkzljffz7hr25grkw299hh7ja79jkhh2naibs"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Hsa_eg_db = derive2 { name="LRBase.Hsa.eg.db"; version="2.0.0"; sha256="046fgcdnr4yk9gpgk1v6gpg2mv7jb27zlxyqrwf9mcmr28m7f13p"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Mmu_eg_db = derive2 { name="LRBase.Mmu.eg.db"; version="2.0.0"; sha256="0lklf8bilbcf1xbb7ggry8x9pd6qwgv5w19pddgl1ns9dgn0g447"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Pab_eg_db = derive2 { name="LRBase.Pab.eg.db"; version="2.0.0"; sha256="1ig17q920l670kbrinf2939cpvlbdf3zz01fj4bmf1sw4b58v5zh"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Rno_eg_db = derive2 { name="LRBase.Rno.eg.db"; version="2.0.0"; sha256="0rjm5b63hb1h0kkjqxrldh3d2h7l6qqx2cdl3lf2hn1rpfgifxrk"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Ssc_eg_db = derive2 { name="LRBase.Ssc.eg.db"; version="2.0.0"; sha256="0k5dkflsxg0bs2aqcsh0b3vq2clycpxqj138rs6h0w8gr9613w5m"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Xtr_eg_db = derive2 { name="LRBase.Xtr.eg.db"; version="2.0.0"; sha256="1y6nivswrsivlylc9413bngli5nbbd1q6rvr5whx3rh9rxvm4r17"; depends=[LRBaseDbi RSQLite]; }; LowMACAAnnotation = derive2 { name="LowMACAAnnotation"; version="0.99.3"; sha256="0ri301ci54s8wwkah1jccy5h44xg8yjk08j5b15qmdsm25hli4wm"; depends=[]; }; LymphoSeqDB = derive2 { name="LymphoSeqDB"; version="0.99.2"; sha256="1cdyn2imjh4zr23szndc4vwyiacxs1jsp14gil2dyq9aifa25qr7"; depends=[]; }; MafDb_1Kgenomes_phase1_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase1.GRCh38"; version="3.10.0"; sha256="057531mvxip32lyqak4hh964ms0cil29p5cch5fpjw5vbbzidrlc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; @@ -183,83 +187,84 @@ in with self; { MafDb_gnomADex_r2_1_GRCh38 = derive2 { name="MafDb.gnomADex.r2.1.GRCh38"; version="3.10.0"; sha256="1v0sdjmn9z8gqn4yj4v04zycj3ngr32r04zqmkp6y41hcgdr8lxw"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; MafDb_gnomADex_r2_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.1.hs37d5"; version="3.10.0"; sha256="0y42ncmilijdxsgqsmskz7gff3il3fdf2kpflknmz1z9kybzaday"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; MafH5_gnomAD_r3_0_GRCh38 = derive2 { name="MafH5.gnomAD.r3.0.GRCh38"; version="3.11.0"; sha256="1m793ri39gjm41yfq3yglg7dxyqd2ss0i0vvivqxigff63iz8awh"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores HDF5Array IRanges rhdf5 S4Vectors]; }; - MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.13.0"; sha256="0l55b03072s052ji52glqpqc8x0z7d4fkf392113bskmplgcg3ny"; depends=[MeSHDbi]; }; - MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.13.0"; sha256="061bp9y592h57y0i4y6aah9vln23f1mk1yzx9fxhimnd4rzmwzl4"; depends=[MeSHDbi]; }; - MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.13.0"; sha256="10253yy1gv96x6h92xz35qhz087ma6whr5pbi69mjdfc21pzyc7a"; depends=[MeSHDbi]; }; - MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.13.0"; sha256="19aw7vq6iafhjb1n7kgbyaib2di682dia0yjc4r3cnzv7k7kv8z0"; depends=[MeSHDbi]; }; - MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.13.0"; sha256="0ljijw7p5nxvgda2jb3gf6x03y046ihxz7nl2s90rgf4s1fjciaf"; depends=[MeSHDbi]; }; - MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.13.0"; sha256="1afv8yf2yggid12id0j5v5gf5qhcdmanfanp2d13cnkzgxkr88js"; depends=[MeSHDbi]; }; - MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.13.0"; sha256="1amgb9gr5aa1cgggf2x5ailzm4mfq78lfqnx1yzq1ix3nh5idajf"; depends=[MeSHDbi]; }; - MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.13.0"; sha256="0byxvlwcix154qbpvpgv9zblyn1wx6npn366303v81r6x5gh4qkh"; depends=[MeSHDbi]; }; - MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.13.0"; sha256="1v1f7b0qyii8nakn7lhckbyqyw43101i2y0dcamp5lds8m79691d"; depends=[MeSHDbi]; }; - MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.13.0"; sha256="1rr4yr0n2zdkcq2xj7cyv683sgv5mnjwcylz4r8wkrdhji28zyyh"; depends=[MeSHDbi]; }; - MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.13.0"; sha256="1nz96wyw99rz2wlsa59y36ddxg3i4vz116i4sjvm3ww2q71nimmr"; depends=[MeSHDbi]; }; - MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.13.0"; sha256="0irsxad7s1asllwajwy1bl2frs22sgwv60fdgnslgxmngg5v6jbc"; depends=[MeSHDbi]; }; - MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.13.0"; sha256="0qq08f245qsq6c9g38wcbn9gnhhx2wlsas3na1n5fycr5d19qbvz"; depends=[MeSHDbi]; }; - MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.13.0"; sha256="0mjg8dinlp1qqnf2h1lpyhig9ywa9x99isyvj2z37mrbk9mh6si6"; depends=[MeSHDbi]; }; - MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.13.0"; sha256="1xlcn55v3hyngdqmb5a3v64ll1cmm1yd8gbxw3sbbbnwp349w2jb"; depends=[MeSHDbi]; }; - MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.13.0"; sha256="13naakq86kgkbd8cif5gi7hzag64xkp8mddrwn4hc67i1dzlfyq0"; depends=[MeSHDbi]; }; - MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.13.0"; sha256="1b4sl5qiwh0vxm1svwqwsbrz2b88jmf7s14nwhb27431ml5lya03"; depends=[MeSHDbi]; }; - MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.13.0"; sha256="12qak3gzbr7hpg08nmpa69h0qw0v4kdplf10ilycc8ra1nrm9s8x"; depends=[MeSHDbi]; }; - MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.13.0"; sha256="1gp33ga0gdd09flz1c9q7hf3y8si238zb6hmn1v9pqmkww5pns3g"; depends=[MeSHDbi]; }; - MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.13.0"; sha256="0v3jlfg95fgh4f5gnqz1prb2lwj1bn7ggparxqzc63j0jws0wmgp"; depends=[MeSHDbi]; }; - MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.12.0"; sha256="1vhg07r0yk876zlzbn86nj6g91ilrnfrj3p5q2pkrcsic0m5nwcw"; depends=[MeSHDbi]; }; - MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.13.0"; sha256="12kc26wsg390hzhi4x2rmnm1s38sqs4nckkvrnmv70mjabg34w49"; depends=[MeSHDbi]; }; - MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.13.0"; sha256="171nrhd4nqpgcaaa62gj1di2xdsy3n8pp09lsbyq4slasmcd450w"; depends=[MeSHDbi]; }; - MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.13.0"; sha256="15nb1pbnfkhr83q06irghi4r7la5h6dn993la3sn1f8614hcr2wd"; depends=[MeSHDbi]; }; - MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.13.0"; sha256="1jgvbp0g4armmvg2w5rpxkx8zclll5nl6j6zbq9d1w7kk4lazw83"; depends=[MeSHDbi]; }; - MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.13.0"; sha256="0p3p4ld74hszgvv6xd5kmd7i9glv1l4mdqigglr1sk4vig1qwg47"; depends=[MeSHDbi]; }; - MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.13.0"; sha256="0pbd49s4n1mar58did4amrq5h78ic54gk6fnlyicddf7xg24qsp5"; depends=[MeSHDbi]; }; - MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.13.0"; sha256="1bga7nlfkyqqxq4m9c44l6hnswqa3dfbjzbnnyh8xmyp7m91kbj3"; depends=[MeSHDbi]; }; - MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.13.0"; sha256="0vaz520r54ydbb0why68hnigd924y3vk72357cms363qs6753dij"; depends=[MeSHDbi]; }; - MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.13.0"; sha256="1fjdb5h3dsgxk38c1fff30knnhav9w6pdl7vqdfdhq7642c6a1y4"; depends=[MeSHDbi]; }; - MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.13.0"; sha256="1vqwdf8sj0qid2df0qqhxlwbccmlmw63kmhdmz49fz3hxyr081z5"; depends=[MeSHDbi]; }; - MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.13.0"; sha256="1ixn62rn6vc17ks23hn9hkfyynp3p7mf9wq3rw9wiyyzpl6xgqw0"; depends=[MeSHDbi]; }; - MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.13.0"; sha256="118j864y3bn386cgjbwqwvdjflk7f510yzx451w9mcbfm7af8nqh"; depends=[MeSHDbi]; }; - MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.13.0"; sha256="094h4w8p0h81pqz4f1ykk0285fq5cayvkv01712bi85qqvyc8vh0"; depends=[MeSHDbi]; }; - MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.13.0"; sha256="19xj1x0bnxk8y3n7cjihp7aa1l6vvy6d3m949zv0cs9ia8mw5lrh"; depends=[MeSHDbi]; }; - MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.13.0"; sha256="1m2zi73d23hqa7dn8ab6bm3ynjc4mngakcba5wa3fkvv972kba26"; depends=[MeSHDbi]; }; - MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.13.0"; sha256="0sgp5hckh3waa1bp43rsnx6hlcvjr7a6yw46m6r3jzwdfpkmbh4v"; depends=[MeSHDbi]; }; - MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.13.0"; sha256="17k0h1jfiqwg6396m3mnsq3v042p8rck19wdhrgdasb6vp7rnk7w"; depends=[MeSHDbi]; }; - MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.13.0"; sha256="0z68zs190sv1v7r0059hf5c3mcrv2hil3hx3liycck2fiwarjw8d"; depends=[MeSHDbi]; }; - MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.13.0"; sha256="0nbc8710nwjlxxcslljcfj72qlq1k64i8p4jvyddjp8fj8anca9f"; depends=[MeSHDbi]; }; - MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.13.0"; sha256="0s45w1rnz79azqkk852knicviqc6jisxnpkzmm4j6ydjqibz4xv0"; depends=[MeSHDbi]; }; - MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.13.0"; sha256="1azm323gqax1ffixvqqghqbbmv7gfq5jhxhn1qr07raml1z56yiw"; depends=[MeSHDbi]; }; - MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.13.0"; sha256="0aix6k1lmdd4wms4dcmhw35gsyn07cvir60wslcabsvccjxbip4i"; depends=[MeSHDbi]; }; - MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.13.0"; sha256="1fb3xhwf08h91pmb7nmkz68zwrg8ac1sk55923baa6bn9bwli2ny"; depends=[MeSHDbi]; }; - MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.13.0"; sha256="0py8r05ix4k6xfm3jnzkgzk59gzc1bj43271rbgsmqlyh42abgay"; depends=[MeSHDbi]; }; - MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.13.0"; sha256="01mmn4021cscnp9wfz84rxckqqfn4p98bh4g1mlgwb7wsgf5nbc9"; depends=[MeSHDbi]; }; - MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.13.0"; sha256="1h4y7iqqb4fili8k4k11z5nmgd0hq8rw7p7awjwl6w5v4n9im0fs"; depends=[MeSHDbi]; }; - MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.13.0"; sha256="03rj89bmw4j2fc9lnpwx479j5m089jcj6iisf339bzcw1rgryi56"; depends=[MeSHDbi]; }; - MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.13.0"; sha256="1r2c422w1c88w4sh3s8mqpffx10322c3j44qz4ymxgvnarxc3fkh"; depends=[MeSHDbi]; }; - MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.13.0"; sha256="09s2d9hjzzhlig2bnnr5wkpxgf8pj4q9hwvs4sj3ylabvlg5ak09"; depends=[MeSHDbi]; }; - MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.13.0"; sha256="0l0w4px7wp58rqry4xbz2qh5jc97mmw7pvc1dnhkknr6n96fcpik"; depends=[MeSHDbi]; }; - MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.13.0"; sha256="1v4jcsdww7j0rnck3r30g8p57419ai676qlawmra1w6sdflqcpj9"; depends=[MeSHDbi]; }; - MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.13.0"; sha256="0a6mxwmvsh6zcyqw83y7y1axviqrzy2kdbalh2w8xa3yn72z65ln"; depends=[MeSHDbi]; }; - MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.13.0"; sha256="1n197svyc3p4xf3lc5qdjnhlkiadra43bxdqisk2w60jdijnxyh0"; depends=[MeSHDbi]; }; - MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.13.0"; sha256="1h7iqb9kcxcgslm8rab4469vvay3msd3w08bxv3h0mq7q870z0r8"; depends=[MeSHDbi]; }; - MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.13.0"; sha256="0mxs9bjs0pnj9aszfdydkw2kljcixwflvwcaz94my30444c1pi9l"; depends=[MeSHDbi]; }; - MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.13.0"; sha256="03fcidamz9x0xgyl5fsvphc7l5v2hvr4izf6ma2g34a1l1qhs0g1"; depends=[MeSHDbi]; }; - MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.13.0"; sha256="0vyi7awyy3v851ylc95xrn5wvbprq1qq3x1ypsb31qqny940m5rf"; depends=[MeSHDbi]; }; - MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.13.0"; sha256="18amkwn9wglj3a5hh9b0zfd23vizmj1nfa90jz93w1adksjlky7v"; depends=[MeSHDbi]; }; - MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.13.0"; sha256="1yrx8dj0lx77qny0dha68lwy3x3c9d4rkb8gng3by55zgp6hghms"; depends=[MeSHDbi]; }; - MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.13.0"; sha256="18x1q7md0zvb233qw1x6qs8k55hjkh1nd1cvizs2vhsbvzfw9yjz"; depends=[MeSHDbi]; }; - MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.13.0"; sha256="1fqi308z4psspykj1dkq76v94641wq9mnxwj3yzd9j49c8x45294"; depends=[MeSHDbi]; }; - MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.13.0"; sha256="0kakfkkmvmlk22g1aa86grahfbvk8hainar1760r5j8zrny8dvvr"; depends=[MeSHDbi]; }; - MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.13.0"; sha256="09gzlfp958bfkvas0hxaw6r319y02sygmb7ywxvdqj41sxyv63zp"; depends=[MeSHDbi]; }; - MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.13.0"; sha256="0cm3352chz3qaknq0an8gfsk2xbfn0jw5rqss3lrxcq35x1qk21a"; depends=[MeSHDbi]; }; - MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.13.0"; sha256="1hpj2cr8gixqlvfhnqvr5m3m1ngfdrvavqipf38m5cnm1wlqk9ll"; depends=[MeSHDbi]; }; - MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.13.0"; sha256="1ryrr1mr7w6h8xs4f79zmnnv8j4mkjckxjk4npcdiilfb2zg1y3j"; depends=[MeSHDbi]; }; - MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.13.0"; sha256="10ygdjx63ajd1vsgrn2f8isvaxdf2p6yg45yqrmjv3zhbvi1aav1"; depends=[MeSHDbi]; }; - MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.13.0"; sha256="153i3ln2m8rb0445hjplnim4h8dvvmf370zglcc5ww9dcx9m93nb"; depends=[MeSHDbi]; }; - MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.13.0"; sha256="0sm2sg246w35vfv9dam40x85mdv18fpi5j1k31432chrda867rf0"; depends=[MeSHDbi]; }; - MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.13.0"; sha256="0xqapk2fkaj719ih818rpb1ciiblw6zr6a83y0xpwrm8y29m3qh5"; depends=[MeSHDbi]; }; - MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.13.0"; sha256="0zfrjhrw2jrk6yzkmjnxfqws1a2sylpz1rz2im5n3xnlk6l5d0zn"; depends=[MeSHDbi]; }; - MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.13.0"; sha256="0v6g4wqsph3jhxziayijqn63cjp9z4i6jpm5wk431qp9zhr3vw4w"; depends=[MeSHDbi]; }; - MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.13.0"; sha256="1v2blabzcd1vdmc47m9rfknlf4865ppvfx8p2nm9cilrwp29w1pk"; depends=[MeSHDbi]; }; - MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.13.0"; sha256="0ymc65z935yzz0dxvrlx1wj40zmd7192jdav3736syhq6jrwmq3d"; depends=[MeSHDbi]; }; - MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.13.0"; sha256="1vnh6y9jr03cmncyka886wq59qnbpk1d3sqryxjd3d3hyhg7jz7b"; depends=[MeSHDbi]; }; - MeSH_db = derive2 { name="MeSH.db"; version="1.13.0"; sha256="1fdqzbka0bbpzphr64sjabddr1a7mrk310mzjfrwd6sll54am9q8"; depends=[MeSHDbi]; }; + MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.15.0"; sha256="0sjgjv48qdyhkmaiypqc6v1mi1hdrncz7ff1pjz77xgblpyhcxf5"; depends=[MeSHDbi]; }; + MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.15.0"; sha256="13di3ljv7l3nq5li2qcb3r4y0d205hjl00ys0g26inp86qda5bnj"; depends=[MeSHDbi]; }; + MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.15.0"; sha256="1qbhki6q2hl3vhyl1aaz722aqn5imb45qp7apypyf0qpy8f3jm15"; depends=[MeSHDbi]; }; + MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.15.0"; sha256="0dg0rllh3q1pn9vlji5mymix5kvynwx16jhy8rxm0h7swz1bvkvc"; depends=[MeSHDbi]; }; + MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.15.0"; sha256="1pq6gyv01hwhbmkyhm23j4gl68mdj2rs97b7iv0bfnyvky1qydw4"; depends=[MeSHDbi]; }; + MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.15.0"; sha256="07iqhj76l8bpxjlfdpzd1nn1jf7mwlikdcnb8a7b4ffw5bcnss2r"; depends=[MeSHDbi]; }; + MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.15.0"; sha256="1z9y7sraqikaxnkb4h3bx25fhm1llr0rzi4wg04nv8mjmy27p0dz"; depends=[MeSHDbi]; }; + MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.15.0"; sha256="0i1fcasgmzsj4k1k7i8zgp25ywgkrpr9iwrl3r1lk6iwz70fq9pg"; depends=[MeSHDbi]; }; + MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.15.0"; sha256="0cf9wklw5xkskz87d40d9sv26czxv1dnmzab9cj66viv7h8vzgly"; depends=[MeSHDbi]; }; + MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.15.0"; sha256="00gfh6x8gbx77smmkw6bbqlmbaymzzamrqcjd29kqpa9npgvylnl"; depends=[MeSHDbi]; }; + MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.15.0"; sha256="0zrs7m9582skcwqayxz2w73l16lv3fm0yk26aqi2gqvw75b5sn8z"; depends=[MeSHDbi]; }; + MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.15.0"; sha256="1cbnslagmzm9gx12ay35ccbks9imra2yllgw79jagq38d78pdczs"; depends=[MeSHDbi]; }; + MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.15.0"; sha256="0n44sin2dkyvz1jxqhaicdvmfzd5gbj7xbzvbvqw5w17k8gdxzj8"; depends=[MeSHDbi]; }; + MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.15.0"; sha256="1jasx1fjwwpmas8xzysnnkphinbrdv5ykgispcck4gp5y6q253m0"; depends=[MeSHDbi]; }; + MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.15.0"; sha256="0d2w94r521bfcgvd8zh69mmbf04yw6qzpzgi36a4an806j2x32yx"; depends=[MeSHDbi]; }; + MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.15.0"; sha256="0477klxnxz637dics2csd4raw672db419i1793gm0zxaws3xv49a"; depends=[MeSHDbi]; }; + MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.15.0"; sha256="1g0b7zdx454ckdhv89fwp6hjgmrbgjy83p75qx84lvj02cx57yb2"; depends=[MeSHDbi]; }; + MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.15.0"; sha256="1ill5jzrwjs0n4sfidw505shcr5cvw11gkm646bkcv6g3nybrvkw"; depends=[MeSHDbi]; }; + MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.15.0"; sha256="09i3qcvd14swdhgpv3j9b12zfvaimrml4w5ri9bk0s0w0s6c7wlw"; depends=[MeSHDbi]; }; + MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.15.0"; sha256="1xya53rsf857vd7cykxz5xralmlcgn8mm5vsm3qnmy8ffilxpg0m"; depends=[MeSHDbi]; }; + MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.15.0"; sha256="14w73m2qhvhrqpj4fs9ychc1zl6s7scl9baccbcybfv1n7lkxlwz"; depends=[MeSHDbi]; }; + MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.15.0"; sha256="1mkpy2srkpgds8528jlaysvy3ch5kh9f06n5fyjrbdwnjq4l88dy"; depends=[MeSHDbi]; }; + MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.15.0"; sha256="0qdimflvq01hvqfx715qxw32vah5v0a2k8l7zjkn60d4ck8ykhxq"; depends=[MeSHDbi]; }; + MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.15.0"; sha256="0mrr8zx6hb5rd6j8514iy6kiqkirvr6mjhnfss3dcb3jgj6lax0f"; depends=[MeSHDbi]; }; + MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.15.0"; sha256="0l6vnjvx2dw85g73d2fk3asvbal65iw7kilgxlcas89rwng0z7aw"; depends=[MeSHDbi]; }; + MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.15.0"; sha256="1jyhrikbqnpd9wvdmlsxisp19xgl6wipznn9hgvk5h5my481cf50"; depends=[MeSHDbi]; }; + MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.15.0"; sha256="1nkc51mnhqcrkgniy7j8s4s8llamqz0cidfc4n47jivfxprc369h"; depends=[MeSHDbi]; }; + MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.15.0"; sha256="1jwlx1d36zrnlssrb7ppxjp0bnd75smib7j97fdbdwnshqlyqf3h"; depends=[MeSHDbi]; }; + MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.15.0"; sha256="03r7792xc51vcha32qffbcqvphnn8fxmq4l01dgnc91pzzl4wiwp"; depends=[MeSHDbi]; }; + MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.15.0"; sha256="0priqpr6kv5zvyb7zz1kmgpx0wkgsszd2wils1sixdjp91hmi13i"; depends=[MeSHDbi]; }; + MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.15.0"; sha256="0w86nhasi0sd0zb8ryi33dh649k5jpwk1ya5nq98frzlz9d1dlj4"; depends=[MeSHDbi]; }; + MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.15.0"; sha256="0cmr19xxydl594pjfhk0qniwfj62mkfnz943a67gdncdanyqgqf6"; depends=[MeSHDbi]; }; + MeSH_Eca_eg_db = derive2 { name="MeSH.Eca.eg.db"; version="1.15.0"; sha256="0547q39aig8y860kapn1n5r8yv5vakmfi4ija5192nrxnpc1b0sp"; depends=[MeSHDbi]; }; + MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.13.1"; sha256="1k9zzq5igi4dd92zfaniv8l4hr0b1381wn20ybnc1zl68qgnc6c4"; depends=[MeSHDbi]; }; + MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.13.1"; sha256="0vvi9shain6wqsrs32hzhpwssw5wfsxcq3zq648amhs114slql28"; depends=[MeSHDbi]; }; + MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.13.1"; sha256="0w4dsd2f85qaglqwb1ls94ncinsdhvaxhb8l5vqs7yg3ins23kam"; depends=[MeSHDbi]; }; + MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.15.0"; sha256="1pdhkdn4navl5jyqdq9p1mb5yzmpjjngkv5br381pmiy5slg5psi"; depends=[MeSHDbi]; }; + MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.15.0"; sha256="1d6cz0ldkasmdqzsk05ifxxg1qji2sb7dms31ibrhr4ds03y4843"; depends=[MeSHDbi]; }; + MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.13.1"; sha256="0c3ndl270kd3v7az7dm3ng812nvr85srgxmazhxrfbk0fay962ln"; depends=[MeSHDbi]; }; + MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.13.1"; sha256="1gavxbp6n5jgdhgnm4a2rqfh7rphk2k58pcyk23ldla2mbp2c4fm"; depends=[MeSHDbi]; }; + MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.15.0"; sha256="0lflpha24bnlppjjv722nn679hz2fhvsff57y5i9jfkbliyq4ccy"; depends=[MeSHDbi]; }; + MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.15.0"; sha256="06j0i8nj0093nagr6lhzzszmhdnxmn38c0l7gjdmc48byrpilx18"; depends=[MeSHDbi]; }; + MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.15.0"; sha256="1kzxwp5sy48qa1aav17m8g7bakdc51f3dfigyp6dp0yc2g30wvxp"; depends=[MeSHDbi]; }; + MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.15.0"; sha256="1ndc46ys5js4pn014dbm2432p7n0mzrjd09nhxpxd4jg7rj5b79s"; depends=[MeSHDbi]; }; + MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.15.0"; sha256="1zs7qsx7bryrcqclmfj39vhl6qbvm0zyw4h2nh23ypapjl8kf81x"; depends=[MeSHDbi]; }; + MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.15.0"; sha256="1yls5fwk4ch8rla7ry2l0gajhlqb26iz9gcb4sy9mymlnck4fy28"; depends=[MeSHDbi]; }; + MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.15.0"; sha256="1lmag4gj8gps7wpnxdafkz5fxlswcfikgzslr93mzg38653ka1nc"; depends=[MeSHDbi]; }; + MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.15.0"; sha256="1cvrcga9kcvznff22z89g7sp1jhmyh74wyrznc1i8l80dackhzff"; depends=[MeSHDbi]; }; + MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.15.0"; sha256="0l05y7zi1jwj6m1mzfi8kzp1nfcp5q1nq7w9w4ghr3hjxv2mg7w0"; depends=[MeSHDbi]; }; + MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.15.0"; sha256="1zppv4fr2sjql32k4mc0c6qdm5f97i9aacyfgrjpkhba5qrsyfpv"; depends=[MeSHDbi]; }; + MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.15.0"; sha256="0ycihsvi9qvs5bd5qrm1m27rzhpiyf6vjfi4srs7lplp9z329z8m"; depends=[MeSHDbi]; }; + MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.15.0"; sha256="13dwj7v6i3qc2gpsvf9ra9zz5k7plk5ldld43a1wb614bjszywb2"; depends=[MeSHDbi]; }; + MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.15.0"; sha256="0bqwc68wkh9zbmrgx7rb2383axlbizg2m65qzr8s6zizqawm7lif"; depends=[MeSHDbi]; }; + MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.15.0"; sha256="0a4j83v2hk6y8bxjyzb516d12h4ymhmwpj5cs03cf5xd9mwwbb7b"; depends=[MeSHDbi]; }; + MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.15.0"; sha256="0aqqz0arrrs0pcljdhr30ixsbsh79f9ywifyrs00hfngnb2fg45l"; depends=[MeSHDbi]; }; + MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.15.0"; sha256="1rgjayw05ggcqli9991ix3kmjv5fxiz7c3s5yy889libl70qhsqd"; depends=[MeSHDbi]; }; + MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.15.0"; sha256="01w6z5krfikrsndj9qsq6vx6yzwcwhjs2bj3hmyjm4yyryjap2xy"; depends=[MeSHDbi]; }; + MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.15.0"; sha256="0370mrz00k2zlapxrgf74m7sx3jas977dkp5x694b8y6c1qv6gc3"; depends=[MeSHDbi]; }; + MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.15.0"; sha256="07hjznch109aslky2nhj1pk565mkcc6hr5jphc5njakcjflbwbdn"; depends=[MeSHDbi]; }; + MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.15.0"; sha256="0gb5rcgg2653jbz0l6z8672vldb7jpq66y2kfmsj5bsw6s9xc7xm"; depends=[MeSHDbi]; }; + MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.15.0"; sha256="1j7a4ghdzr87s2qnrjsaf3611wb3cik2irrr9mxfbnxqy4yxyfxa"; depends=[MeSHDbi]; }; + MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.15.0"; sha256="0azkfrilcnxnz96kl5b1vmbw1yc6k4vjkqcrh1gpnkivlxww616f"; depends=[MeSHDbi]; }; + MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.15.0"; sha256="0nz2chxy5wqp0jfmlgam73qvz2d2ypfqr2gjzb4rj9c5q20y75jj"; depends=[MeSHDbi]; }; + MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.15.0"; sha256="0bsic8fhv7cyzlcfbis1rrkvf9r3f4735pg62ypczvdj2yx1pqag"; depends=[MeSHDbi]; }; + MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.15.0"; sha256="0rkjl2m7sjdck3037aj69c37wbknjlbfcx59sb86mspv7q33fhpc"; depends=[MeSHDbi]; }; + MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.15.0"; sha256="0w396xl2yq960yfw55vr0n4d7152w65lkd73jblwk5zqwig6f5qg"; depends=[MeSHDbi]; }; + MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.15.0"; sha256="1dy218w8ry9v9yry5fvkkahdh73aa9gd3nlizdkfs901v2pg2fcp"; depends=[MeSHDbi]; }; + MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.15.0"; sha256="0gv9sslvq0dgfgfl04kvhkyzqfi8napkwbisdkfg21x03id16481"; depends=[MeSHDbi]; }; + MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.15.0"; sha256="1xcnjn70qbr2fmsw715wifl61021ghdyhil8nlylm3ydj89qwv6g"; depends=[MeSHDbi]; }; + MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.15.0"; sha256="1l0ylw0i6900ikmlb8z1vi94745cbgj3imfj8xys9r8cdgnzn16j"; depends=[MeSHDbi]; }; + MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.15.0"; sha256="0240iq4fdbi03s36pffbgm375g3ch4gqsyjs79wlhqg7bizvsr93"; depends=[MeSHDbi]; }; + MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.15.0"; sha256="1qa7w7v301pi6lmd31afzvgrxmvs504054hq6rzr33ix5gm035ny"; depends=[MeSHDbi]; }; + MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.15.0"; sha256="0s0442s9z09bcxdbskrg9myqjghl1mk1mysyl90dczv0mfl0hrqd"; depends=[MeSHDbi]; }; + MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.15.0"; sha256="1h807bbzx1f916myi5p1xanvbffygdj2vghhf3spf8bcdm3avcgn"; depends=[MeSHDbi]; }; + MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.15.0"; sha256="055pa2wjm587f2vik92x1fhrk23zhy85sbrbfq2zznikvfjlbf7v"; depends=[MeSHDbi]; }; + MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.15.0"; sha256="1yr3s3b6ds75xrsg9srdkcg53d72wna2cnx5xn9932887125cybx"; depends=[MeSHDbi]; }; + MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.15.0"; sha256="1c0xg9adpiwbwmwaak90pkh2vpakpvwjan2dgj89cxv0v2g5kn7q"; depends=[MeSHDbi]; }; + MeSH_db = derive2 { name="MeSH.db"; version="1.15.0"; sha256="165vdjc9gikwnyvihvkci0n5gbxyna962yiyi21qd4csvin12qzz"; depends=[MeSHDbi]; }; MmAgilentDesign026655_db = derive2 { name="MmAgilentDesign026655.db"; version="3.2.3"; sha256="00d0yjcb5id7zacx4bzdwy4q6f4qvnnx8ph4d4xz1fmcbspz2qiz"; depends=[AnnotationDbi org_Mm_eg_db]; }; MoExExonProbesetLocation = derive2 { name="MoExExonProbesetLocation"; version="1.15.0"; sha256="0bvj3bji4bwwmxjz4b57n1aqypdibdmry30rfwmlxss1hav96sl7"; depends=[AnnotationDbi]; }; Mu15v1_db = derive2 { name="Mu15v1.db"; version="3.2.3"; sha256="0qchqkbx6ybijab8qhflxj33kwksfll1d3d3917vydjac9fzw1lz"; depends=[AnnotationDbi org_Mm_eg_db]; }; @@ -268,7 +273,7 @@ in with self; { Norway981_db = derive2 { name="Norway981.db"; version="3.2.3"; sha256="04ngc2hilqi9m7933mnm7jcvkxlz68vqqh5b628db575vcxql9b9"; depends=[AnnotationDbi org_Hs_eg_db]; }; OperonHumanV3_db = derive2 { name="OperonHumanV3.db"; version="3.2.3"; sha256="082gff88cwk2p50q8g9bixggacaclgqcvk6w5dc11h9fkgvd160i"; depends=[AnnotationDbi org_Hs_eg_db]; }; PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.10"; sha256="1gaq6dnxb83gnlcc544clljgvxwjw98idbq3v6ipqqlx3rdki2xn"; depends=[AnnotationDbi AnnotationHub BiocFileCache RSQLite]; }; - PFAM_db = derive2 { name="PFAM.db"; version="3.11.4"; sha256="1wkchf4hz484xld7fxzcmwc8mcbwzn83fz0hamg1mrp3x45djbmx"; depends=[AnnotationDbi]; }; + PFAM_db = derive2 { name="PFAM.db"; version="3.12.0"; sha256="1s9gdyqxbr944ksr1n7ik15qmh6sq264z3d77iyjvbrba9kx0hpc"; depends=[AnnotationDbi]; }; POCRCannotation_db = derive2 { name="POCRCannotation.db"; version="3.2.3"; sha256="0ybvs4hrxpivdkhm0fxpib11vlxqqdk8prlyj78vj5qzyb3iy89d"; depends=[AnnotationDbi org_Hs_eg_db]; }; PartheenMetaData_db = derive2 { name="PartheenMetaData.db"; version="3.2.3"; sha256="0d37c5b7s3fgkkvg7sj7gl9ksrjk5pyyv54vkys8w3qwgsm8yrdz"; depends=[AnnotationDbi org_Hs_eg_db]; }; PolyPhen_Hsapiens_dbSNP131 = derive2 { name="PolyPhen.Hsapiens.dbSNP131"; version="1.0.2"; sha256="1kikygkli41sn3rqihz0924prmqg2264ifj29vmg1a7qccm0kf7c"; depends=[AnnotationDbi RSQLite VariantAnnotation]; }; @@ -293,18 +298,18 @@ in with self; { TxDb_Athaliana_BioMart_plantsmart22 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart22"; version="3.0.1"; sha256="0j2zr4cddad7z1lxx9m9kfgyy7jajjnblpk9j8igd39ia3ixrpzc"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Athaliana_BioMart_plantsmart25 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart25"; version="3.1.3"; sha256="0a6v0l6p13zmiysi3k8dxzdlxng552qqj9rnlbdavdiidla0pvm3"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Athaliana_BioMart_plantsmart28 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart28"; version="3.2.2"; sha256="1yjyvrbx55y024lqg3b2rlf8pngqw5xi3p83j5ipan05wf0aq6ir"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.11.0"; sha256="1cwdj80yvpp1nv21jpyixlh2d50l201g50f08n6m0dkz6g7cw3v0"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.12.0"; sha256="1k06p4jk3lw8xkn31yjwmwk96rkrl6wqq3rmc8bxlbrdi99lh09c"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Btaurus_UCSC_bosTau9_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau9.refGene"; version="3.10.0"; sha256="1v7q9jaaj1n2vabjj6ij6pz0g89nqlyy4y4g65irz6cm5mvik4q9"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Celegans_UCSC_ce11_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce11.ensGene"; version="3.11.0"; sha256="1b359pb762xhw64lnj9xfn6v6d4mjfsymmp6y5m1i4rrxiyw26q4"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Celegans_UCSC_ce11_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce11.ensGene"; version="3.12.0"; sha256="0vkra4f05s8nd3xvma1dw6zk5mn7yvnxykx1cs9zad041i1447m3"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.6"; sha256="1aq4jhn2c67wibq02l8drrjscmicbj6z35d0jksq8mwhz8k30zn6"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Celegans_UCSC_ce6_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce6.ensGene"; version="3.2.2"; sha256="1sgppva33cdy4isj2is8mfalj5gmmkpbkq9w1d83a4agcq31mi90"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.11.0"; sha256="0rigyddnqxb3dfrj93198j0l8s1flp051xbkmz0b55qp1cyrl5kr"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Dmelanogaster_UCSC_dm3_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm3.ensGene"; version="3.2.2"; sha256="1337x23rdmiiza83ms225kri37h16q5hw1lw0m577abcgip3d7c7"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.11.0"; sha256="1gpm060wmlk1dm8s7p61afa0pba70zkamfh63gzcbdai5v74rkzx"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.12.0"; sha256="0yij7zyqkmmr13389rs2gfa5anvvw648nnl1kjbsgvyxkggif8q4"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.6"; sha256="1isd4idvh9flvirrq760cw5lc1nwqjx0q76p9dp01wbbbsb3rfnk"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Drerio_UCSC_danRer11_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer11.refGene"; version="3.4.6"; sha256="0p5pr0fq1l9bp019w2214szf78y3nbw0p4819jcnba1v50y3336l"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.11.0"; sha256="1wxiih08p52bmjh6ywnbndvhz45fdsd1ixx1j7k181a8xd0cw47q"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.11.0"; sha256="1bvbbw7c96jpzg8rz9gvkq4pf74bz3nj28br747r0wsll5lk398s"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.12.0"; sha256="0c9msvqhx7zcxyhfj9h7rmlwmax1n48cwz1c0v58djcms6bqq2m5"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.12.0"; sha256="1fl0jnim4lx1a4b82b9nrgmb91najwhggqb611axcqp9bdkkhw1q"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Ggallus_UCSC_galGal6_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal6.refGene"; version="3.10.0"; sha256="0ddibdn6shlhqfmlajnq754z4vad7gi55vb5y8j89nc2k1sc5a3i"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_BioMart_igis = derive2 { name="TxDb.Hsapiens.BioMart.igis"; version="2.3.2"; sha256="0590a2hkrpm33hmjg5g0gm6sig3xvc09m0q6lwmafgaajf90h6ky"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg18_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg18.knownGene"; version="3.2.2"; sha256="1yk9ggclkqqfzrdp8gcqyplvif824pa7df54ck5gb1xb9q5s975w"; depends=[AnnotationDbi GenomicFeatures]; }; @@ -312,22 +317,24 @@ in with self; { TxDb_Hsapiens_UCSC_hg19_lincRNAsTranscripts = derive2 { name="TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts"; version="3.2.2"; sha256="0bmbp7kydvviczw8axgxq2wdlwq6fdas90jk9bg56avjq5syws2g"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.10.0"; sha256="0lqir16l8wphhpaizmvgmjzk40p90rzgqndgvbms7ickinrpg59s"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmulatta_UCSC_rheMac10_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac10.refGene"; version="3.10.0"; sha256="1d1gvs6877649zwgja1z5x0mgci2kirbj7pzhb22xyinif3bhz26"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.11.0"; sha256="0plhdp4rjc79rq5gm81vb7b2y1hj036mbfafm55ixf2ggahibdqy"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.11.0"; sha256="1l6i064s8h9xp0f9n5cjs8n0q4fx1x70mmhzix006l3zicajpc7d"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.12.0"; sha256="1a0wbh4dajpgynmw2iwbvp836nklzlk0cfhqnwmqq9l4gzzh2w07"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.12.0"; sha256="1k7mq3p96wfd0694zw00hs4529zvv8nnfdwlsb94bn11qjhr1zrz"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm10_ensGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.ensGene"; version="3.4.0"; sha256="0saxi1fdiwd38sfvy1rynd3v44rbp158jv6sjqcivvaqnd84zg9s"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.10.0"; sha256="0xs9npnhbwll7p62hibs02y4ac23jchdcr25i6a7qwq1kms82qk9"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmusculus_UCSC_mm39_refGene = derive2 { name="TxDb.Mmusculus.UCSC.mm39.refGene"; version="3.12.0"; sha256="0465dma4q6jkyx23vkq4yz252mm1ksr3186cbjdqvnang57m5lc6"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm9_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm9.knownGene"; version="3.2.2"; sha256="16bjxy00363hf91ik2mqlqls86i07gia72qh92xc3l1ncch61mx2"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.11.0"; sha256="0w94r2g1x9zgdbz8mkka41264q3ylf88m3rll594nn0h5g01g0yg"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ptroglodytes_UCSC_panTro5_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro5.refGene"; version="3.11.0"; sha256="0rmmvwmh9dqvjynka89jkdg8rnmr474adxsivwbpkxj371gyby31"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.12.0"; sha256="036g5zn9rzy8qivb1snhpancsz1z60i3r7z3g91bgla4jpgwwjv6"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ptroglodytes_UCSC_panTro5_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro5.refGene"; version="3.12.0"; sha256="0yypv9iqn4i36hnvcr2lsfgaabl8g2pm72ya4psvia261jr2i12i"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Ptroglodytes_UCSC_panTro6_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro6.refGene"; version="3.10.0"; sha256="0z4lq7wy48kkxnx29zmrbmrq4qjrj3digwxkw3x54qq80nvzxiza"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_BioMart_igis = derive2 { name="TxDb.Rnorvegicus.BioMart.igis"; version="2.3.2"; sha256="1099vkk8g3lxbgjxsm1p1m3mjj08nsw282mqxgzpnrxf7m6jll76"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_UCSC_rn4_ensGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn4.ensGene"; version="3.2.2"; sha256="0gv8bynfxxa471ap069mjvfrb1d7a0c4w5k8hxkr4hnsm44mschm"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.11.0"; sha256="0hlh3c559m4ny3b5sfdk7f8rardai13p41fx2p9p2chd95s0j3p1"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.12.0"; sha256="08kf9kmdvifcbz0lc8paqp10x272b0f1jh6bj241ii455xsby2zi"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Rnorvegicus_UCSC_rn6_ncbiRefSeq = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq"; version="3.12.0"; sha256="1gb8l88z1xiyc1r8hvv4kdahd0py2dr5k0zizsrfh013p6q7z5yw"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.6"; sha256="1piqli0wdq3r289is8lmijnshm8rmx7rphp2qfymlvc0jmvgs9wr"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Scerevisiae_UCSC_sacCer2_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer2.sgdGene"; version="3.2.2"; sha256="0l5gcwhbvzx60p9hjhd31angamb0hkgdg2avga7341j77rd5pwza"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Scerevisiae_UCSC_sacCer3_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer3.sgdGene"; version="3.2.2"; sha256="1sjwl7fb3l3zxxbk8gkvzxwdsind0xjj7kmh7dachm6fi17hpb3d"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Sscrofa_UCSC_susScr11_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr11.refGene"; version="3.11.0"; sha256="1ikqammkzqdza8948jwdr18mslm59izni690r2lm04lrpmg4c6fh"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.11.0"; sha256="0z1blh92w81mwv674fng5m50gzsy9pxymmy1q773h54k9qlksvy3"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Sscrofa_UCSC_susScr11_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr11.refGene"; version="3.12.0"; sha256="1i3w8avi5ihkynapya1wy70i6f0nq4jyy5nvlwikppqpdjwn7gb4"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.12.0"; sha256="01bl7zdxyhhg4706jhi7271fs09riixkyr3x0bancl1fpzwszc6p"; depends=[AnnotationDbi GenomicFeatures]; }; XtraSNPlocs_Hsapiens_dbSNP141_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP141.GRCh38"; version="0.99.12"; sha256="0a27y0ngg760y5wwcja4dpd7cjd8h5zg1s2b3a1r54s21k65zny3"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; XtraSNPlocs_Hsapiens_dbSNP144_GRCh37 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh37"; version="0.99.12"; sha256="0k823fvqjmdkmd47m7wyra6jxmv8lnk2i1xl4pp0mh3zgb87hgfb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; XtraSNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.12"; sha256="0d4q32ij2x4726wvw06sgmivid0n94vfdmszdyh607xlcahqxa5z"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; @@ -337,22 +344,22 @@ in with self; { agprobe = derive2 { name="agprobe"; version="2.18.0"; sha256="1vnawamcpz16na8nmlq2czfxcr325fwdnngxl65mmnbd0f4lmy3k"; depends=[AnnotationDbi]; }; alternativeSplicingEvents_hg19 = derive2 { name="alternativeSplicingEvents.hg19"; version="1.0.1"; sha256="1v714abdpzhwa450zr66s1yjpxl6lkwi3wjbwn8phn87cgf8rj7q"; depends=[AnnotationHub]; }; alternativeSplicingEvents_hg38 = derive2 { name="alternativeSplicingEvents.hg38"; version="1.0.1"; sha256="0im87mrh1n6kv84q6lm4y15lb93rih88zdpa0jms5az91lyvsf25"; depends=[AnnotationHub]; }; - anopheles_db0 = derive2 { name="anopheles.db0"; version="3.11.2"; sha256="1f2lzva0w841655fq9f8zvaj00w9h965af2nki1b7258jwal857h"; depends=[AnnotationDbi]; }; - arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.11.3"; sha256="1vl28gxqgl48s1aii3r0y984vdic9g8x7y17k85cgv85j45n1dv6"; depends=[AnnotationDbi]; }; + anopheles_db0 = derive2 { name="anopheles.db0"; version="3.12.0"; sha256="07xdk002a41yj79d60a63l5wmyyz2x9py89nh2hnsqm2cvx90wk2"; depends=[AnnotationDbi]; }; + arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.12.0"; sha256="01cg5g8ikgim46s470hp7g6pnln8szwr1pmpysyad3w4ipd03asl"; depends=[AnnotationDbi]; }; ath1121501_db = derive2 { name="ath1121501.db"; version="3.2.3"; sha256="1zrf26cfhlmrb5pyfawwk4v8l1mflx8c43zsxrwkbmxzc1jnc7dv"; depends=[AnnotationDbi org_At_tair_db]; }; ath1121501cdf = derive2 { name="ath1121501cdf"; version="2.18.0"; sha256="1naq8f8dwgbmndx178nm2pw6hjx5ljx0w1wb4dfjifnl4bs5rqcc"; depends=[AnnotationDbi]; }; ath1121501probe = derive2 { name="ath1121501probe"; version="2.18.0"; sha256="0a2nd8zhp3ybis780l3rrmwcxskbl3a111g8w6m8qfwsw5vnlqg1"; depends=[AnnotationDbi]; }; barley1cdf = derive2 { name="barley1cdf"; version="2.18.0"; sha256="0rbij5cqr2sz33y5waybv85nrcgf70iwj5gk13g0xn9p1l1zxyn2"; depends=[AnnotationDbi]; }; barley1probe = derive2 { name="barley1probe"; version="2.18.0"; sha256="1kh5r748b4vkmvlfaclmrh07ypbrzgxn90liqfz1rwkabh6rfk71"; depends=[AnnotationDbi]; }; bovine_db = derive2 { name="bovine.db"; version="3.2.3"; sha256="1i8mgk60hlmvngb4c727wajix9mca9gfg0pzxrnfcjwi87rpw7fy"; depends=[AnnotationDbi org_Bt_eg_db]; }; - bovine_db0 = derive2 { name="bovine.db0"; version="3.11.2"; sha256="17kgw3nps8gh2i2wh10wz1zjzgz5sz5vyf28y3s206jnpsnmglss"; depends=[AnnotationDbi]; }; + bovine_db0 = derive2 { name="bovine.db0"; version="3.12.0"; sha256="04mzghsr386fs3wr97cdnzclcynxpmmj3zklx4cjhl9q28jvk1nd"; depends=[AnnotationDbi]; }; bovinecdf = derive2 { name="bovinecdf"; version="2.18.0"; sha256="13mf0yy0dypkm5n2ghl04xm6ayb9bn9qijqhgynksghi7s2k34mb"; depends=[AnnotationDbi]; }; bovineprobe = derive2 { name="bovineprobe"; version="2.18.0"; sha256="0i4afa5dksnir2nfrfh2cynjm59sm6vfaqa9wyag8cxg7c2nlm1i"; depends=[AnnotationDbi]; }; bsubtiliscdf = derive2 { name="bsubtiliscdf"; version="2.18.0"; sha256="1rihrjim37b49rhqr4nxga8sp67qri9xqlqc141mhbngh6cw3iyl"; depends=[AnnotationDbi]; }; bsubtilisprobe = derive2 { name="bsubtilisprobe"; version="2.18.0"; sha256="0k99hvgaswn96x4yanvr9cy8bdy69sd5q7yp6dj9synxj7s1fcw9"; depends=[AnnotationDbi]; }; cMAP = derive2 { name="cMAP"; version="1.15.1"; sha256="0pzizm27rgcaic7wsh52z30v1jwarmz4cwh1mksbygp63k54mwiv"; depends=[]; }; canine_db = derive2 { name="canine.db"; version="3.2.3"; sha256="0wbyzhk827l49yxzimvznx9z6yag5nd4djm2hddysf5nk1ndapqs"; depends=[AnnotationDbi org_Cf_eg_db]; }; - canine_db0 = derive2 { name="canine.db0"; version="3.11.2"; sha256="1rlhpfj7gapjbzcya0k1cdiysxmp6r3wy1vh55j01z9v4k4lfqk9"; depends=[AnnotationDbi]; }; + canine_db0 = derive2 { name="canine.db0"; version="3.12.0"; sha256="09y3l6ilc7r6m9ghvfsz5xw1m9xl608x9gwbfz9rq33dszvmmssd"; depends=[AnnotationDbi]; }; canine2_db = derive2 { name="canine2.db"; version="3.2.3"; sha256="1gzd2x23dkfiwnwqz9pdn5lp4l8aby525mhscn3xakw633si4dvz"; depends=[AnnotationDbi org_Cf_eg_db]; }; canine2cdf = derive2 { name="canine2cdf"; version="2.18.0"; sha256="077cmmnhjdk0vxjzm1kqf3q5kgx6chwkm59dr4s5dy019rqb6sqr"; depends=[AnnotationDbi]; }; canine2probe = derive2 { name="canine2probe"; version="2.18.0"; sha256="1l849a1dqy4kpcsxs0lvb48ag81i0f0ys0w4757rw4kp8ry59z4b"; depends=[AnnotationDbi]; }; @@ -362,10 +369,10 @@ in with self; { celeganscdf = derive2 { name="celeganscdf"; version="2.18.0"; sha256="0a6w0a48azg0i21j3aqb7fnxck3ff9w3gsi89bnlfh0zx6pknx7p"; depends=[AnnotationDbi]; }; celegansprobe = derive2 { name="celegansprobe"; version="2.18.0"; sha256="05k7si3f8pzkyb8jv0r2vkavbrqxsn4nawl92gcphfsylrwcddqb"; depends=[AnnotationDbi]; }; chicken_db = derive2 { name="chicken.db"; version="3.2.3"; sha256="1rq9afkpcpv8qi75shvnsw8di3ycai4ylv7jq9zwj51zlwlw9cpq"; depends=[AnnotationDbi org_Gg_eg_db]; }; - chicken_db0 = derive2 { name="chicken.db0"; version="3.11.2"; sha256="0xgj8fjcdv6xswg6y4m5lqh01s1scinijcxvmibl6sw1c3xn7g3v"; depends=[AnnotationDbi]; }; + chicken_db0 = derive2 { name="chicken.db0"; version="3.12.0"; sha256="1qsnbxd79cvwkj5883p2ya57afkknsnyps11iy0qhl5jinvywi6l"; depends=[AnnotationDbi]; }; chickencdf = derive2 { name="chickencdf"; version="2.18.0"; sha256="09hhim5s9xj7n2b5rhn1svf5qly2mn0rr2v2ls25hfzyrqcbxlz1"; depends=[AnnotationDbi]; }; chickenprobe = derive2 { name="chickenprobe"; version="2.18.0"; sha256="1fdsiwfyg7fwslrr7xs3gny7sw24bzg5k1fvlyzb1477sgj0pid3"; depends=[AnnotationDbi]; }; - chimp_db0 = derive2 { name="chimp.db0"; version="3.11.2"; sha256="01lhhzmqiv5yjnnc4msiqxwx2nbg19j6dbgvph4l69a75yfs2fg7"; depends=[AnnotationDbi]; }; + chimp_db0 = derive2 { name="chimp.db0"; version="3.12.0"; sha256="05hvlfikgbbhc3a6h2bf7d3n7dqs5jk6qbxg8pk7bcbj17xndacq"; depends=[AnnotationDbi]; }; citruscdf = derive2 { name="citruscdf"; version="2.18.0"; sha256="1326mj1xf3k4v5iyyn46whx24qfng0x3cv6rvckdr1ycc1v887dn"; depends=[AnnotationDbi]; }; citrusprobe = derive2 { name="citrusprobe"; version="2.18.0"; sha256="0bf1wic136cxwgs4j13wsyqasnyvr0jw1hzg6qizndmy7g8hrb87"; depends=[AnnotationDbi]; }; clariomdhumanprobeset_db = derive2 { name="clariomdhumanprobeset.db"; version="8.7.0"; sha256="039bsywnim0nr8b3w6vkj4m20j0pggnm6ajjz24bnlikm9zzrs6l"; depends=[AnnotationDbi org_Hs_eg_db]; }; @@ -388,14 +395,15 @@ in with self; { ecoli2_db = derive2 { name="ecoli2.db"; version="3.2.3"; sha256="07vc5fl2zq2f65ndcldyzvwfpl65snp6ygvw658j4036lbb7cpjl"; depends=[AnnotationDbi org_EcK12_eg_db]; }; ecoli2cdf = derive2 { name="ecoli2cdf"; version="2.18.0"; sha256="1rkxrwadq9kg9685z9pg6rgc4bblkx5p3c6snsl4gv2k188dva9r"; depends=[AnnotationDbi]; }; ecoli2probe = derive2 { name="ecoli2probe"; version="2.18.0"; sha256="11q4ka0ncjapahic49xdl9919vm9frrwlqgj101krgkg262lfm8n"; depends=[AnnotationDbi]; }; - ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.11.2"; sha256="0rnnjh16grl9d9jsfhm6vi6898aziwvr56rp6zc7yzz913hkgwkj"; depends=[AnnotationDbi]; }; - ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.11.2"; sha256="0naxgp5q6di565rpp5k04lfv6p2vw9ski7m75f2nk0ksdlpywx9f"; depends=[AnnotationDbi]; }; + ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.12.0"; sha256="0by1l28is01a5pbg5clci9vk54nihfbddi3ffn9rav1673l3qm1x"; depends=[AnnotationDbi]; }; + ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.12.0"; sha256="0zyp0vk5kvb1jkmj2a5qmylh9m33a1lmg6vm1k5g7ln9fah130bg"; depends=[AnnotationDbi]; }; ecoliasv2cdf = derive2 { name="ecoliasv2cdf"; version="2.18.0"; sha256="16i6has9qgmzakcy24racc1h9j331wndv5c87qp5r1zrai61zyav"; depends=[AnnotationDbi]; }; ecoliasv2probe = derive2 { name="ecoliasv2probe"; version="2.18.0"; sha256="1hfrnal170cdigc2fmnynb75jjsiq77p4x6ws9gah558hvx87nk3"; depends=[AnnotationDbi]; }; ecolicdf = derive2 { name="ecolicdf"; version="2.18.0"; sha256="18g5prjykn356k35m131ifn128k5mhij2x26balqav0azigzjqsn"; depends=[AnnotationDbi]; }; ecoliprobe = derive2 { name="ecoliprobe"; version="2.18.0"; sha256="17g5zxfzsak7a0w51irc0w1w2i5ngdkx9db6rhv1fyp8mfjgaphd"; depends=[AnnotationDbi]; }; fitCons_UCSC_hg19 = derive2 { name="fitCons.UCSC.hg19"; version="3.7.1"; sha256="19isa4x8js0pdb4k8a11bw3bzmzv6jc4jphzrvav7piqkvrgykzx"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - fly_db0 = derive2 { name="fly.db0"; version="3.11.2"; sha256="19323k5pd5xa9m8cqykyig0gzwlk5wcssi1k8drbvl8f2jz384bn"; depends=[AnnotationDbi]; }; + fly_db0 = derive2 { name="fly.db0"; version="3.12.0"; sha256="1q4i4hg3aap8553jsb4w02p3vbd3pc4w5ry0cpicd3zh1w7bn846"; depends=[AnnotationDbi]; }; + geneplast_data = derive2 { name="geneplast.data"; version="0.99.2"; sha256="17smdm98djj9n7h6w7wy5k5q466zn9kqvs47qvf8kdmahghrdhii"; depends=[]; }; geneplast_data_string_v91 = derive2 { name="geneplast.data.string.v91"; version="0.99.6"; sha256="0mc26d0sgmpmfmqsqinqv5k6vhg0hlc8hsjkcnvf369yav224nq1"; depends=[]; }; genomewidesnp5Crlmm = derive2 { name="genomewidesnp5Crlmm"; version="1.0.6"; sha256="06dmwnjy3gb53y6nr02dmp22qzfl5d63wppazrabcqbzwimhnvp8"; depends=[]; }; genomewidesnp6Crlmm = derive2 { name="genomewidesnp6Crlmm"; version="1.0.7"; sha256="16qcxa32fmbdcv5dck0grsnqyfcqql7wpxa1l6andv9hrvabv2jx"; depends=[]; }; @@ -527,7 +535,7 @@ in with self; { hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.7.0"; sha256="0ba3yvizj9ya61rr9ik2hdxhy0q67908x16n58jjjfq8wf96h7sp"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.7.0"; sha256="0chkxxpfl696qqiai3i30ylpsihyicbs0hbcni6nmnhfz9k5800g"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.7.0"; sha256="0wk2lg74zkgxh6frmikhk4bxndiyvc1j7mhvz65w8fxfqiwfyf5i"; depends=[AnnotationDbi org_Hs_eg_db]; }; - human_db0 = derive2 { name="human.db0"; version="3.11.2"; sha256="1219w285fjpws76bv8q1a6c9qv8rkfyaqqfnx0vgf0nds75msc5y"; depends=[AnnotationDbi]; }; + human_db0 = derive2 { name="human.db0"; version="3.12.0"; sha256="1szqvcns639cw5l727bhla2blz36x0i6xkdzw3dl5nwm0p2qiy59"; depends=[AnnotationDbi]; }; human1mduov3bCrlmm = derive2 { name="human1mduov3bCrlmm"; version="1.0.4"; sha256="1p7qpzk6svafgdafljhh4k0z7pcs78qmwwfd80r0a1yhkssmp0v9"; depends=[]; }; human1mv1cCrlmm = derive2 { name="human1mv1cCrlmm"; version="1.0.3"; sha256="1qlph3qrjv52ddzlj8pwa93zzh70x4mbdrdr7q9pan427lpck9gx"; depends=[]; }; human370quadv3cCrlmm = derive2 { name="human370quadv3cCrlmm"; version="1.0.3"; sha256="1chjx9vsmqz2whslw1l7jn7nfn7zx6pcjfmqqm9mh81i74rzrdik"; depends=[]; }; @@ -565,9 +573,10 @@ in with self; { m20kcod_db = derive2 { name="m20kcod.db"; version="3.4.0"; sha256="1p2sm5j4b50iqzwcb984qrh74c3hf6yml7b8mvxlhhhvxz4iy1np"; depends=[AnnotationDbi org_Mm_eg_db]; }; maizecdf = derive2 { name="maizecdf"; version="2.18.0"; sha256="0yfz5gjhsq4wz6j63s1b1hxjz03gsmrlfs2cdc8smq6azp3zdid4"; depends=[AnnotationDbi]; }; maizeprobe = derive2 { name="maizeprobe"; version="2.18.0"; sha256="01h5dv5i0zaqlphkii9ipxy9wswv1srgprrpr5vmi01c9d98qsk0"; depends=[AnnotationDbi]; }; - malaria_db0 = derive2 { name="malaria.db0"; version="3.11.2"; sha256="01825x7r26a6gp8lhd239gdrg8jxnfsl5cdffj1z0d03s4wbjnv0"; depends=[AnnotationDbi]; }; + malaria_db0 = derive2 { name="malaria.db0"; version="3.12.0"; sha256="1jbxvm3v8phyhqywm5plx0sjdgd0cn47fbsqxgmpmzyav8kilanz"; depends=[AnnotationDbi]; }; medicagocdf = derive2 { name="medicagocdf"; version="2.18.0"; sha256="1clz679cc887x98c6jk93cphijkbg5r2nd9idrj5901yvh6p9n5q"; depends=[AnnotationDbi]; }; medicagoprobe = derive2 { name="medicagoprobe"; version="2.18.0"; sha256="0w6j1pfkvb3npc8srpjifq2ywnqxhc9q090jqzmkx22x36cw9cl5"; depends=[AnnotationDbi]; }; + metaboliteIDmapping = derive2 { name="metaboliteIDmapping"; version="0.99.8"; sha256="0aywrh84a0qcgrjc4zp7j73xdb8fhgxkmsly0qnl2fwarmzzvlkj"; depends=[AnnotationHub]; }; mgu74a_db = derive2 { name="mgu74a.db"; version="3.2.3"; sha256="0xd2gbvry061409kiwq99i13641g8x6m9kbgg4yr0x6m9dh7hxa8"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74acdf = derive2 { name="mgu74acdf"; version="2.18.0"; sha256="187k8y1dnnyw926h090gmkk1081sa91fn113lysll3460dqn3ylg"; depends=[AnnotationDbi]; }; mgu74aprobe = derive2 { name="mgu74aprobe"; version="2.18.0"; sha256="0813s2w5s9ahaqn91mkwzfckclv5jdphq17j2qwyzd4xqyxrmsbi"; depends=[AnnotationDbi]; }; @@ -619,7 +628,7 @@ in with self; { mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.7.0"; sha256="1s7cdjglrc9qqf3gsmhsyycfa0h5qrbk28i4z3z4mb9g6242r1r4"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.7.0"; sha256="0l8y2zbhykzqs9hbjhj1cys1mzdjhmi4rjv4l3v0sv5969h6sl96"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.7.0"; sha256="1mkw3997mqr7ssa60zpwhlyajda51smcrnlnxwif78g99yj0nrxb"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mouse_db0 = derive2 { name="mouse.db0"; version="3.11.2"; sha256="0cwacdipbw6j1nxwjgjryqw81vwixcgnrymhva498g22nid8j3vk"; depends=[AnnotationDbi]; }; + mouse_db0 = derive2 { name="mouse.db0"; version="3.12.0"; sha256="0lyah05kdgx5sf2hn6p6ac8b922qg1lf5m13rpixvv6362cn4wk3"; depends=[AnnotationDbi]; }; mouse4302_db = derive2 { name="mouse4302.db"; version="3.2.3"; sha256="1wdgqawqzkr39xwl32cap4ksr59p7r7i83g82h1ss4q3lm58gxpm"; depends=[AnnotationDbi org_Mm_eg_db]; }; mouse4302cdf = derive2 { name="mouse4302cdf"; version="2.18.0"; sha256="1mpyma4x8zfs2fmmx57xw4cfs2cf9lhw71nc3icl72d7vmwidswc"; depends=[AnnotationDbi]; }; mouse4302frmavecs = derive2 { name="mouse4302frmavecs"; version="1.5.0"; sha256="04clwkfz1gqqwrnqbavkka3hv480w6vi6c4q947qqnhw8j5jjp7s"; depends=[]; }; @@ -656,26 +665,26 @@ in with self; { nugomm1a520177cdf = derive2 { name="nugomm1a520177cdf"; version="3.4.0"; sha256="0skd5b76si0vydzk5qhg4f1a1j655alxflm9sqci8fi8safwj96a"; depends=[AnnotationDbi]; }; nugomm1a520177probe = derive2 { name="nugomm1a520177probe"; version="3.4.0"; sha256="1n70k0mhv146983myjgk1cgkr9rmmcpqdv8wpkcr320qcvgf9bn7"; depends=[AnnotationDbi]; }; oligoData = derive2 { name="oligoData"; version="1.8.0"; sha256="1d1yfms3jv2c4s255xnh8yxwijrj35skw3nxds7l46y88lg3qn8y"; depends=[oligo]; }; - org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.11.4"; sha256="1nl54mxhfggbsyd05jz6pn7g9arb6ikv05dibhwba3vhf57kny8i"; depends=[AnnotationDbi]; }; - org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.11.4"; sha256="1yhrnssmdjlh3hgiqii4j0bnvpp9bs1z9vi1qm7v2cj820pn7mck"; depends=[AnnotationDbi]; }; - org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.11.4"; sha256="1ypfb1ny0s23mz8958cvbglf4dgqackw4ljw3zhx5nb4ad3r2r5i"; depends=[AnnotationDbi]; }; - org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.11.4"; sha256="1ay2sv4hbiw2g7qy9m1pmpb8n9xhfjj7y9sdcf5sii8j7yjk8yy0"; depends=[AnnotationDbi]; }; - org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.11.4"; sha256="1z43kn96mq8km31ihcjhswnd67v31f2v0ksb65vhhhc3qxfgxs6c"; depends=[AnnotationDbi]; }; - org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.11.4"; sha256="0sn75clknjpii8h2lw9nn7psswcxn5g3gy1kqafbgsy9bp63zycc"; depends=[AnnotationDbi]; }; - org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.11.4"; sha256="0s1gp827h1m99xwmr372d846gaw3y2dwa2hdarp63621jyyh6d8z"; depends=[AnnotationDbi]; }; - org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.11.4"; sha256="0gx64w3fwf8h3mdnfwhsfylf12lp4iam4mhlr3mcc81dwgzf67dr"; depends=[AnnotationDbi]; }; - org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.11.4"; sha256="1nri5cxi619iblhczz637crgarqxncvap2672fgb8snwrzqvdsrp"; depends=[AnnotationDbi]; }; - org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.11.4"; sha256="1p8bid5nqr9ihl1cyq1i8chpwx5mvdx7610qjwj7in22l2ribbi4"; depends=[AnnotationDbi]; }; - org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.11.4"; sha256="0mg2098sss1d2gwdx72qssc5xpl4p7smfdry508hfpm4f1dr91k0"; depends=[AnnotationDbi]; }; - org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.11.4"; sha256="1sss35risk2gzb5yn3j4x2dz4pl98mw0z131a0p1318a0srspihj"; depends=[AnnotationDbi]; }; - org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.11.4"; sha256="0z4mddwixk4dwb3jp31knqyxg50vcnp1wch6d5mzblg6jmwbc4w7"; depends=[AnnotationDbi]; }; + org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.12.0"; sha256="1cc7iy9wsrcvz94p70gvkacwmzw42g2nxpwyzlcb3f3cc5a8kzb2"; depends=[AnnotationDbi]; }; + org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.12.0"; sha256="0ggv68p5ly1pbxai62mlajkgyxh8wc5as5xikm03s7sqj99fl9zj"; depends=[AnnotationDbi]; }; + org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.12.0"; sha256="1brx8m6cpmkkaf3f1rmxb3payln342cmkhbp4z8mx6n82jjnvx0l"; depends=[AnnotationDbi]; }; + org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.12.0"; sha256="0nq4g94jp1pg15lrl430iq7545lgxp2c3af03cq77rx2b5pfn0im"; depends=[AnnotationDbi]; }; + org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.12.0"; sha256="0w18zxd9pbwcsmz1ilddywhd225mv3975imq0kihc84hzlca9gh0"; depends=[AnnotationDbi]; }; + org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.12.0"; sha256="1mys35qrvjff1xnr7xrgf9rmpamdia9p54p6y73bhxs7q9x6sl7c"; depends=[AnnotationDbi]; }; + org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.12.0"; sha256="0kay0vsbvymrva7d11qq5rwi67lfmprrpi1zrzrgdx24xnv9fdkl"; depends=[AnnotationDbi]; }; + org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.12.0"; sha256="0c4p6jr83k0gm6pvn760yr8xf33wggrfcr6fg7a42a96bcf817gs"; depends=[AnnotationDbi]; }; + org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.12.0"; sha256="1rali3pahng83lakv80bp0vi5gisykbc4y77mx1ap7hiv9vnyaiz"; depends=[AnnotationDbi]; }; + org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.12.0"; sha256="11240bskl0cmkrr4238gmkbb0kc85dmb5sv5f3mlg77a4qhj4wm4"; depends=[AnnotationDbi]; }; + org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.12.0"; sha256="1fs9680g03w9r3jjcn3nlbzn2aqh6fiapnamql18cypc8x9sp8a8"; depends=[AnnotationDbi]; }; + org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.12.0"; sha256="013c69b7h2vcv6h3jp0a26p9dkr1wj9599bh34xiyfns1z242lvl"; depends=[AnnotationDbi]; }; + org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.12.0"; sha256="053cg979pwkvas8sip0a5q6rrbkzh5d9wv4420r3mv4sdg7q3kfc"; depends=[AnnotationDbi]; }; org_Mxanthus_db = derive2 { name="org.Mxanthus.db"; version="1.0.27"; sha256="1jqwsdjz1d8fwqhq26lavb2kq739ddlb8khsh4b096vhnwv3dxg5"; depends=[AnnotationDbi AnnotationHub BiocFileCache BiocStyle]; }; - org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.11.4"; sha256="1bp2bp4b2kmfia7wvr4gjncwc2n5ya0y2wv5p6lad6c7yz4f67c3"; depends=[AnnotationDbi]; }; - org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.11.4"; sha256="1xhzdkbml9l5qnmhkfn5kfbjqn5fqjhnh14z8ldy4c7v3cwxdid0"; depends=[AnnotationDbi]; }; - org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.11.4"; sha256="0bp46dc5md7vw9j0y2cim6zlvwkgcbhaiqxl89d6xalj0q9wjqmn"; depends=[AnnotationDbi]; }; - org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.11.4"; sha256="0cj5050n86nw85p0h960qnhq82a94xs14zf67k3qwqqv49x8hvaz"; depends=[AnnotationDbi]; }; - org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.11.4"; sha256="02k6gg9537d7nmb9pjmz6ss82j9nbmiamckaynv002vlkkxg9lps"; depends=[AnnotationDbi]; }; - org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.11.4"; sha256="0qjf6zv00k0ial9c3vszb4nf6i11qqjmg9njfp9rkla9c73pihwf"; depends=[AnnotationDbi]; }; + org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.12.0"; sha256="0vka0m5x2g6cw2p0zkk602zic8gzqsb23p622d0v8kwb5zpmb7c5"; depends=[AnnotationDbi]; }; + org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.12.0"; sha256="1zvlnqyywkp07nkryzlmykbzdisnbafy0i9ws9slq8dhjhacgxj1"; depends=[AnnotationDbi]; }; + org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.12.0"; sha256="1ia6bbfkcl4f9hxrckbpq46r5i3l9zf8bvq4xggm82gwc5bn9pab"; depends=[AnnotationDbi]; }; + org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.12.0"; sha256="1vflhhgg59gdnidcbn8vkia87impcz28vv98i17821rhkw1i8fss"; depends=[AnnotationDbi]; }; + org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.12.0"; sha256="04rvpx63s45dx5k067q5fhrqs34s4gcb3xv0h0ixrg76ns1nrmbl"; depends=[AnnotationDbi]; }; + org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.12.0"; sha256="0chr3agh0q79m7ang9vdf87p60k1kxcjamnwxf9gf2avrawlp05m"; depends=[AnnotationDbi]; }; paeg1acdf = derive2 { name="paeg1acdf"; version="2.18.0"; sha256="127pgxxp5wp3hgmafbzdzsk4gqnllq1m1gcsfyzkvpkvmbn4aa9n"; depends=[AnnotationDbi]; }; paeg1aprobe = derive2 { name="paeg1aprobe"; version="2.18.0"; sha256="0hbyd402wf9nzy2g93nhnf2zsi9jvhgfk0llxlyfk0kqxs0y4byy"; depends=[AnnotationDbi]; }; pd_081229_hg18_promoter_medip_hx1 = derive2 { name="pd.081229.hg18.promoter.medip.hx1"; version="0.99.4"; sha256="1h4925dmw0vfsnhllg55gswq3sxfmx9rcjzifdvgs9y27399psrr"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite]; }; @@ -853,7 +862,7 @@ in with self; { phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.7.1"; sha256="0dka39rvx4d3wbcjypcgvc19s6cnxkkfywa4irv23kpibq1sjyv0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; phastCons30way_UCSC_hg38 = derive2 { name="phastCons30way.UCSC.hg38"; version="3.11.1"; sha256="0g7mn3wa9l9hpks828n82rads1ls5mjgh6dfgk3iw1nrl0ylws4v"; depends=[AnnotationHub GenomicScores]; }; phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.7.1"; sha256="105isdrb3nsy30wd8yy9vrrv8b7c8izc11xqqixg6rcriacd0rl0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - pig_db0 = derive2 { name="pig.db0"; version="3.11.2"; sha256="12pidwjb2wjzcz72m8jcp8spr6nkxfhkl75qr5b062pyw4mkrp6r"; depends=[AnnotationDbi]; }; + pig_db0 = derive2 { name="pig.db0"; version="3.12.0"; sha256="14v6sjpgk2qxkp5mkq6wbdb1wv2hv8xmmhsrbsrnhf3iflqrq41p"; depends=[AnnotationDbi]; }; plasmodiumanophelescdf = derive2 { name="plasmodiumanophelescdf"; version="2.18.0"; sha256="1vs36091djinn3g6rjhmy9xfdyi58365zbcjc9mf50adnp2i5fq9"; depends=[AnnotationDbi]; }; plasmodiumanophelesprobe = derive2 { name="plasmodiumanophelesprobe"; version="2.18.0"; sha256="03hfq51nrpmx8ihc48jiih6bk99irrgal9x7i7mgcv8xd508gcsy"; depends=[AnnotationDbi]; }; poplarcdf = derive2 { name="poplarcdf"; version="2.18.0"; sha256="0j28czs936j2wgwp63qbwl1mjcflcrx7ir88jzxkkw7411ch1gl1"; depends=[AnnotationDbi]; }; @@ -882,7 +891,7 @@ in with self; { ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.7.0"; sha256="135cgn92raa6f9yiw4k25rn04rpg5mdnf969l66x4s1jcc0rwscq"; depends=[AnnotationDbi org_Rn_eg_db]; }; ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.7.0"; sha256="0lp4prymrm3cp8yq1hba9bylw22hcvlx7piqpvjx51hj79yrwdig"; depends=[AnnotationDbi org_Rn_eg_db]; }; ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.7.0"; sha256="1b7s2r4w1yy2v3srs6n931zc64qf58nq4apmq2ag5nx50wspima1"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rat_db0 = derive2 { name="rat.db0"; version="3.11.2"; sha256="0v7agg9rx4fifqp7p95lxh0fkwx891w043p0qqqpfksvrbshx13y"; depends=[AnnotationDbi]; }; + rat_db0 = derive2 { name="rat.db0"; version="3.12.0"; sha256="0p9jnh0k379x6agqphi9lwmznvv8nv0k1s1qpnfh4d801pdcnk0l"; depends=[AnnotationDbi]; }; rat2302_db = derive2 { name="rat2302.db"; version="3.2.3"; sha256="0vj4vkx091m34xqjh6gv6m2iqszvn5rq3kvnpyq3fin5v42wrsr1"; depends=[AnnotationDbi org_Rn_eg_db]; }; rat2302cdf = derive2 { name="rat2302cdf"; version="2.18.0"; sha256="1748rc6yypd7y8wgr1qg632pcsxx0fkxjz6b3z4fhblgdllhy9wk"; depends=[AnnotationDbi]; }; rat2302frmavecs = derive2 { name="rat2302frmavecs"; version="0.99.11"; sha256="0qy5hf86lrkn20yg6d46kcw9fjc0qhsbzbyavaj1v2zl34xvr1ii"; depends=[affy frma]; }; @@ -890,7 +899,7 @@ in with self; { ratCHRLOC = derive2 { name="ratCHRLOC"; version="2.1.6"; sha256="0mgk6lwvvdwjzjh4r1q1q6nfnx4vqx9iy6gmbrb9f31jf30hqnsb"; depends=[]; }; rattoxfxcdf = derive2 { name="rattoxfxcdf"; version="2.18.0"; sha256="0q84lfaxnnj2zbm5q8xswa1md15fjj4i0djnqr835ixzn7px4yqn"; depends=[AnnotationDbi]; }; rattoxfxprobe = derive2 { name="rattoxfxprobe"; version="2.18.0"; sha256="1kp159553rkcn9yh6x3yph3yjz2ja21wi9j5ax03qnhwlsl1x8ik"; depends=[AnnotationDbi]; }; - reactome_db = derive2 { name="reactome.db"; version="1.70.0"; sha256="05wc4fp0faq6h3kq5rwafnips043as31yq11mrjngfxvf5i10srg"; depends=[AnnotationDbi]; }; + reactome_db = derive2 { name="reactome.db"; version="1.74.0"; sha256="05ip70gik4f5r5bs36mkdlzcrxgn39inp7430j4kcqqa5j4svv8z"; depends=[AnnotationDbi]; }; rgu34a_db = derive2 { name="rgu34a.db"; version="3.2.3"; sha256="1s2sd5bqlj4qhamhrnb9byxn8nc7z265mqy7zzkgxcd6a2k472vp"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgu34acdf = derive2 { name="rgu34acdf"; version="2.18.0"; sha256="08z9f16xp1m2mwl9vlmbffxl4zyyl8cgzf6wp66rrm32lvl0nbwq"; depends=[AnnotationDbi]; }; rgu34aprobe = derive2 { name="rgu34aprobe"; version="2.18.0"; sha256="1gjxyq9128jgv3ic386f84rajgf3wz7yi2dja80y0ff4m0a48dlh"; depends=[AnnotationDbi]; }; @@ -904,7 +913,7 @@ in with self; { rgug4105a_db = derive2 { name="rgug4105a.db"; version="3.2.3"; sha256="0lq8k95qm0q7j65nf16p3f09dn9zs87n3k561wxrgi2lb0pf6j40"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4130a_db = derive2 { name="rgug4130a.db"; version="3.2.3"; sha256="0zlcn9spw23bj3px9z1l2f5afn09zbr6rv0nbd2h6dd12wrvy1zk"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4131a_db = derive2 { name="rgug4131a.db"; version="3.2.3"; sha256="1r272jf9cflf1yf4bznp4d59h7bd7adh1i3rf890h5ffc0xzf5cq"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rhesus_db0 = derive2 { name="rhesus.db0"; version="3.11.2"; sha256="06vq8zzy5kxp9winq2vxw5b803dbhb4sh057k9rl2jy32vmblm45"; depends=[AnnotationDbi]; }; + rhesus_db0 = derive2 { name="rhesus.db0"; version="3.12.0"; sha256="0rcj9xml2rdhyz77iggnimijx4ia0nwf9sm8wzjjlwlkb522gvi3"; depends=[AnnotationDbi]; }; rhesuscdf = derive2 { name="rhesuscdf"; version="2.18.0"; sha256="0q2alkxm80wkzaf0q80df27q30qkswybavz05x6ywsihbs9h0nb8"; depends=[AnnotationDbi]; }; rhesusprobe = derive2 { name="rhesusprobe"; version="2.18.0"; sha256="0fd8pvwvpcmx41k80nbccjxllh39fvjf7l9dr8facisl1x7gsfil"; depends=[AnnotationDbi]; }; ri16cod_db = derive2 { name="ri16cod.db"; version="3.4.0"; sha256="1xz533vxjdyxx1wkks0kgk6b90sxs44iqcsvyds0xcm573bx8c6q"; depends=[AnnotationDbi org_Rn_eg_db]; }; @@ -943,8 +952,8 @@ in with self; { vitisviniferaprobe = derive2 { name="vitisviniferaprobe"; version="2.18.0"; sha256="1ggz1s37dwvrkhj4vx2civyhap7bgqsshy33lk14z4fjsayfi39a"; depends=[AnnotationDbi]; }; wheatcdf = derive2 { name="wheatcdf"; version="2.18.0"; sha256="1gmbrdilqvm54h6nkb1cm01ki8aipiywd4qj8gpwlm2hqrimr8kr"; depends=[AnnotationDbi]; }; wheatprobe = derive2 { name="wheatprobe"; version="2.18.0"; sha256="1fifi3pvzdrg356idwz0kx7qlf5mssdxlyvwpn3cjgw0z7n7cnw8"; depends=[AnnotationDbi]; }; - worm_db0 = derive2 { name="worm.db0"; version="3.11.2"; sha256="0w124pn96yvl0ksb0bncwxdhfzcg491s60rfla3gr17pfg1h2klv"; depends=[AnnotationDbi]; }; - xenopus_db0 = derive2 { name="xenopus.db0"; version="3.11.2"; sha256="1l9pi5ayrkrq5gswms33z3ldip3kj2bn5pj6nmy1dzx9i4d0llnr"; depends=[AnnotationDbi]; }; + worm_db0 = derive2 { name="worm.db0"; version="3.12.0"; sha256="021fck9gd3jy1a15n4x3l59qfvw0xr2dg0v7cwza857nhrbh7y5n"; depends=[AnnotationDbi]; }; + xenopus_db0 = derive2 { name="xenopus.db0"; version="3.12.0"; sha256="0ml6skgvhjr4fssnc0x6rz1z6qg1lnxppw7478g3233cfmw8ymfi"; depends=[AnnotationDbi]; }; xenopuslaeviscdf = derive2 { name="xenopuslaeviscdf"; version="2.18.0"; sha256="1bcz1hr7gxw6ac4qvw0giph6hfcf5i9b11s274ypq512qc1d32iq"; depends=[AnnotationDbi]; }; xenopuslaevisprobe = derive2 { name="xenopuslaevisprobe"; version="2.18.0"; sha256="0prb14zn2gvgxq8w0y21x1ng51cn3bgjhkppf7zkmnq1xkzvq0pw"; depends=[AnnotationDbi]; }; xlaevis_db = derive2 { name="xlaevis.db"; version="3.2.3"; sha256="0cdi71c8pflb8n4yfxc0wmfi51w6z0dlz7nw5hv0hkx547v79d53"; depends=[AnnotationDbi org_Xl_eg_db]; }; @@ -956,7 +965,7 @@ in with self; { ye6100subbcdf = derive2 { name="ye6100subbcdf"; version="2.18.0"; sha256="1169hv56981b915rlr5w5sn6ppyjd8as7f4k1hbjzadrdrl3glwp"; depends=[AnnotationDbi]; }; ye6100subccdf = derive2 { name="ye6100subccdf"; version="2.18.0"; sha256="0mhr4zd33gfvvivc17k7fb6nvmhq6h3q0xbx2zl09zd6qk09kizm"; depends=[AnnotationDbi]; }; ye6100subdcdf = derive2 { name="ye6100subdcdf"; version="2.18.0"; sha256="11b1fflgc34lrj4yf1p7way5n83cm9c7znsbxpzlwddwyy8qib30"; depends=[AnnotationDbi]; }; - yeast_db0 = derive2 { name="yeast.db0"; version="3.11.2"; sha256="1wbywd8lbbgndhyy0nwdxc91cq5s90q67q6wpdikzc5m7px3v4qx"; depends=[AnnotationDbi]; }; + yeast_db0 = derive2 { name="yeast.db0"; version="3.12.0"; sha256="0mgyb650gs1bfnlvd115jhj3ypyfmwql5dj864sv9svxcdysc212"; depends=[AnnotationDbi]; }; yeast2_db = derive2 { name="yeast2.db"; version="3.2.3"; sha256="1xns0129ifklipbardybkjyxfwnlklavq0k6s15wk2iwk7vxa33s"; depends=[AnnotationDbi org_Sc_sgd_db]; }; yeast2cdf = derive2 { name="yeast2cdf"; version="2.18.0"; sha256="0c68val9x8bfnv4xx0vag9dxwsx5q8dzbj0dpha3nshh12jw48w9"; depends=[AnnotationDbi]; }; yeast2probe = derive2 { name="yeast2probe"; version="2.18.0"; sha256="125nif693qcmxc0nnnz917f9avggcdr8g9rfvx2qdc54a2l7vdb7"; depends=[AnnotationDbi]; }; @@ -965,7 +974,7 @@ in with self; { ygs98frmavecs = derive2 { name="ygs98frmavecs"; version="1.3.0"; sha256="1xrm1209xnknwvad7nvg1a0mbxz15z12yd4x5bia3cq03zcmzf9m"; depends=[]; }; ygs98probe = derive2 { name="ygs98probe"; version="2.18.0"; sha256="0awf6z4j2vb2jk9a9j2r512yd3m31660y68pasa9mp488m270a3q"; depends=[AnnotationDbi]; }; zebrafish_db = derive2 { name="zebrafish.db"; version="3.2.3"; sha256="1n6p04hlm5c32fnficx294s7n7izy5460avagw8hx1g5xryhdzqk"; depends=[AnnotationDbi org_Dr_eg_db]; }; - zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.11.2"; sha256="1lvkxhql6rm3bs2pszk0d6ib8xjrhqmgznn9lnpn0v2lw42ld3vf"; depends=[AnnotationDbi]; }; + zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.12.0"; sha256="1rv3x6h593caw2ml267803qm14nh34dfn301pzznbf6zvd61v6dg"; depends=[AnnotationDbi]; }; zebrafishcdf = derive2 { name="zebrafishcdf"; version="2.18.0"; sha256="0sq1xqhblbilvaiabhqyl9gxdj3jg576vgq8v0cls1zvvx0isrx0"; depends=[AnnotationDbi]; }; zebrafishprobe = derive2 { name="zebrafishprobe"; version="2.18.0"; sha256="1pb8z2rdhq11hq391xyi236scyafbp56kbhhwsnha36yygz5drw0"; depends=[AnnotationDbi]; }; } diff --git a/third_party/nixpkgs/pkgs/development/r-modules/bioc-experiment-packages.nix b/third_party/nixpkgs/pkgs/development/r-modules/bioc-experiment-packages.nix index a5fca5b2b5..fe8b01caa6 100644 --- a/third_party/nixpkgs/pkgs/development/r-modules/bioc-experiment-packages.nix +++ b/third_party/nixpkgs/pkgs/development/r-modules/bioc-experiment-packages.nix @@ -4,397 +4,402 @@ # Rscript generate-r-packages.R bioc-experiment >new && mv new bioc-experiment-packages.nix { self, derive }: -let derive2 = derive { biocVersion = "3.11"; }; +let derive2 = derive { biocVersion = "3.12"; }; in with self; { - ABAData = derive2 { name="ABAData"; version="1.18.0"; sha256="08lzn9342smxr4vidy81rszgcbipk7l8a336g4iym4bc9fa6sspb"; depends=[]; }; - ALL = derive2 { name="ALL"; version="1.30.0"; sha256="1gr0r2g6is475bcz7y1h00wr1sklky1d061mc70i7hf1fgdp1a0z"; depends=[Biobase]; }; - ALLMLL = derive2 { name="ALLMLL"; version="1.28.0"; sha256="09ly5gas0nw92ibyf1ngcvz78yn4dn3jc321y61jmmchxipb1kjm"; depends=[affy]; }; - ARRmData = derive2 { name="ARRmData"; version="1.24.0"; sha256="121x37fnbhplza8ndj04zy04841c5mz2zkfh7645k4sq2qqk4zyg"; depends=[]; }; - ASICSdata = derive2 { name="ASICSdata"; version="1.8.0"; sha256="1xg0gbdv8pkbpy0939fxfgbkdmpqzzqbfc14smyr6qjbw7zpbr4k"; depends=[]; }; - Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.24.0"; sha256="1l03mk6pdz28dzyfid5whn08qkxyfh2dp6b23rsl60ycgb9y41nx"; depends=[]; }; - Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.22.0"; sha256="0kkvf5mq223y0drl9xbi7rxxq4v03380mq7ddwpx76jz9vac9gz2"; depends=[]; }; - Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.26.0"; sha256="03xpcc9x0rdzndrdb73917iqhs2xfn4x3ixa4bjj048zvbdm4b0y"; depends=[]; }; - AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.26.0"; sha256="18c5ydx45gf16fdimn9bzz6z1w3x41kvcsv9b1hclj0bxsym863k"; depends=[]; }; - Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.26.0"; sha256="14pcmka5ifpmv54mg78gggk8f900absdmwpm0y2qxpv4k19fqr0m"; depends=[]; }; - AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.28.0"; sha256="0s079zxd4ik20z5l9zl27zmaxxy0wmc9w4c892mqr1qk8cdp4i74"; depends=[affy]; }; - AneuFinderData = derive2 { name="AneuFinderData"; version="1.16.0"; sha256="19nfx345k8hlllfrhs71bvbnzg3lhr9p9lg4z5lr73kqpxfgx1jc"; depends=[]; }; - AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.18.0"; sha256="0ajzzvpamzk6cpdx5js2ccbhk44wmagl3jxr2h48x3p9cklnjb9l"; depends=[]; }; - AssessORFData = derive2 { name="AssessORFData"; version="1.6.0"; sha256="1qcv3a8pv3kzdhi2bns7j4jn9mrgfpjh2mrc6q7y1lmgqi53knq8"; depends=[DECIPHER]; }; - BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.26.0"; sha256="1lncaw5hh42rx3f145f5d7a9sngnr8ssrip9jbi3c6qgd3g5xiir"; depends=[beadarray GEOquery limma]; }; - BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.8.0"; sha256="0vlgihw522dlkky0jpb01agxyqq394w2gahacihzlc22dc83iz6d"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; }; - CCl4 = derive2 { name="CCl4"; version="1.26.0"; sha256="1p0jly4v6mck2gnfy09alk57fvrvls5184p7vknn70fcjq02ivbf"; depends=[Biobase limma]; }; - CLL = derive2 { name="CLL"; version="1.28.0"; sha256="0cbrm1hr9rvv2qjdxzjy99d5jbspwiyva9zmfy8nqb1kz17nkrh1"; depends=[affy Biobase]; }; - CLLmethylation = derive2 { name="CLLmethylation"; version="1.8.0"; sha256="0r5q9j8cb7s29dpf3nd5hg7wl07rnfzk1mxmrh2hkkslzawrwrpy"; depends=[ExperimentHub SummarizedExperiment]; }; - COHCAPanno = derive2 { name="COHCAPanno"; version="1.24.0"; sha256="1ay0xh3i13aqp0lisczm8jhvk13ld34jx2vc8jvjdzsxpfv5x7v0"; depends=[]; }; - CONFESSdata = derive2 { name="CONFESSdata"; version="1.16.0"; sha256="0fqmxz5jbv6jygbmq95bdyfxcyri6djsscdaxbxkfv2vq3wml1ig"; depends=[]; }; - COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.24.0"; sha256="0pxkmq2xrq4ka7i5rnfvklilddj65m87f04ivh9xv0j19w51rxfn"; depends=[]; }; - COSMIC_67 = derive2 { name="COSMIC.67"; version="1.24.0"; sha256="1a9ciia5g6w34k5mlnssn8r97v1v2bv9qmar4aklif5rnhkwr7mx"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; - CRCL18 = derive2 { name="CRCL18"; version="1.8.0"; sha256="1mcmbpi9wl5cln1wj30m5gkvfdj74kij32vfvvjvl38kw1jc4zyk"; depends=[Biobase]; }; - CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.20.0"; sha256="13465kiz3v8vyb80374lj0awfb5kw1z0rixin46nbi9j1jfsysmi"; depends=[Cardinal]; }; - CellMapperData = derive2 { name="CellMapperData"; version="1.14.0"; sha256="1wc3ck21xdqcrv85jhfh07yvlhkw22xc567lj7yv8vzy0j68gvyv"; depends=[CellMapper ExperimentHub]; }; - ChAMPdata = derive2 { name="ChAMPdata"; version="2.20.0"; sha256="135z6wkrmsg9bwj27by6x5850bpnwzncxvia1x8ggwqxnis0fl9c"; depends=[BiocGenerics GenomicRanges]; }; - ChIC_data = derive2 { name="ChIC.data"; version="1.8.0"; sha256="0lx1yfimxg032hapdx6i6n11fjv1dmcd5a9d7id1h9cgm2qydq1w"; depends=[caret]; }; - ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.26.0"; sha256="0dzxdha2fay07rc7m5wj8aiggmn7qfifjy11ydqql4sfxw7l4wp1"; depends=[bigmemory]; }; - ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.12.0"; sha256="1yzy0y40ahw5p8ia0r3r5ns4an2n9m91zb9ypc25cjasgwpqca77"; depends=[]; }; - ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.26.0"; sha256="1bd119mh0r6m07ni2fb14dyambdzx5yfpy33n9r6f1mkcb39j4gp"; depends=[affy hexbin limma qvalue statmod]; }; - CluMSIDdata = derive2 { name="CluMSIDdata"; version="1.4.0"; sha256="0j8xb2izl0gxwib0srk5bj4gdavi0czp4hwg2w61z7xgdpgqra33"; depends=[]; }; - ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.24.0"; sha256="0agb5xm7fm8cs9lj5yn9zr006zdhyzhz5q4gc920ksaqn9c238nf"; depends=[]; }; - CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="1.6.0"; sha256="0adly63fqnq600if81x0wivv792n6s33a65gjfkfjwvhi9n5lwbr"; depends=[ExperimentHub Rdpack]; }; - CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.20.0"; sha256="07i403mxx1zr7j7bkgmigl0s7ijr6wfnci1x56z9qy0jrrd21zpc"; depends=[]; }; - DAPARdata = derive2 { name="DAPARdata"; version="1.18.0"; sha256="1vnb08lzzm5x23j8slw939al6shb83zv85y6wzyfil2szic51xr0"; depends=[knitr MSnbase]; }; - DLBCL = derive2 { name="DLBCL"; version="1.28.0"; sha256="0d2jv5yni681a3rb39qgc1n8klr0lbwilkrkvd9wv0qq7glv9ba1"; depends=[Biobase]; }; - DMRcatedata = derive2 { name="DMRcatedata"; version="2.6.0"; sha256="17k4cgpqkl47i2cp0c4nh22sz1w54pal16dkvzvrm0vzcvzxiwrv"; depends=[ExperimentHub GenomicFeatures Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 plyr readxl rtracklayer]; }; - DREAM4 = derive2 { name="DREAM4"; version="1.24.0"; sha256="1dxsyzv5y4ivsg078j2m3zvv4h7c8rhk59gf3ndr8lcwp6a7xsim"; depends=[SummarizedExperiment]; }; - DeSousa2013 = derive2 { name="DeSousa2013"; version="1.24.0"; sha256="1svjk5kcjhy23b1i5345y6j3mzdv8lxl4bzm60dcghz4inzbay5y"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; - DmelSGI = derive2 { name="DmelSGI"; version="1.20.0"; sha256="0r1006as1vnwpzf42ps5ca2xbppfb8dcckkiwcajj1lv3g7265kn"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; - DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.26.0"; sha256="008msb4785ghcg0gqyxf999l58j89cvxbkci4n1z6lnjf2gdvl6v"; depends=[EBImage]; }; - DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.24.0"; sha256="05qc92cwkfwc7s68f81nd05xyl890m0w0w31n7pz8r3vxf9x09cy"; depends=[]; }; - DuoClustering2018 = derive2 { name="DuoClustering2018"; version="1.6.0"; sha256="1gw99mgjmjv1fq7qg0g60r3x4zk0gp4d2zlm9p81avrz8gifyglr"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; }; - DvDdata = derive2 { name="DvDdata"; version="1.24.0"; sha256="1z5ijx56iygk0qbi2sb4r4rk42m3pblnig0mc8fh51mrqf6c4f6y"; depends=[]; }; - EGSEAdata = derive2 { name="EGSEAdata"; version="1.16.0"; sha256="1drkhw0a463b1bdpn0r3yg57i1ll076c334ikjvc2bd191d3ilnd"; depends=[]; }; - ELMER_data = derive2 { name="ELMER.data"; version="2.12.0"; sha256="098hdvcl340jhy1vf5rcv28bvi6bk6pfwblck7xsmhdshl9x41mg"; depends=[GenomicRanges]; }; - EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.26.0"; sha256="06bp5549iisaagl00xnjr6bhpgvkiybjgnwsf8i2fqs55dyvrbba"; depends=[GenomicRanges rtracklayer ShortRead]; }; - FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.24.0"; sha256="11arnks0p6c6rx929w3h878imxlslla8xnd44lqgzhal73n22ks2"; depends=[]; }; - FIs = derive2 { name="FIs"; version="1.16.0"; sha256="0r6zrgrd8222rr4vk95gxanzjmdbj48rdc1wy3ld1h6rdjb8szyl"; depends=[]; }; - Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.24.0"; sha256="0hlqnsxcv6jbnswwyqfnxdgw7g2dygxcv81brlnrrw4whb3v12mj"; depends=[Biobase gplots limma VennDiagram]; }; - Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.24.0"; sha256="16mynpadclsciw7zayp3lgahzg1mhi186wjn160dzd2sasz5syw4"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; - FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.26.0"; sha256="0dlhr5dagddw399w64jx01pfbhzx6j2rldpqrpxa03n1fjr5qfaa"; depends=[minfi]; }; - FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="1.6.1"; sha256="1hkw1mg60wf64lrq3h26x2zp0mvhriai9d46mirmkfng4y8ka4xy"; depends=[ExperimentHub genefilter IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi nlme quadprog S4Vectors SummarizedExperiment]; }; - FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.16.0"; sha256="1j1hl33vydrhgii0fam66nywycg80hi845hndhcv5i9l5siiiwbl"; depends=[minfi]; }; - FlowSorted_CordBloodCombined_450k = derive2 { name="FlowSorted.CordBloodCombined.450k"; version="1.4.1"; sha256="0xyji58czc2y0snrydgn23q4z80zabda67jfaqjpwz0zpjh0hwzm"; depends=[ExperimentHub FlowSorted_Blood_EPIC IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi SummarizedExperiment]; }; - FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.14.0"; sha256="1b2h5r4pv4z8v3cb2sw0wg45rb54gqswrmvk4jvwwzypfdd6cvfw"; depends=[minfi]; }; - FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.24.0"; sha256="09305nfvwn4n4xzvjwcyiwq49xhgajgmr7r86yypmx643r86rwai"; depends=[minfi]; }; - FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.21.0"; sha256="0kcgvfks2y9jiljl9a2s13ryljv92q2h656jfjkqmfw0zrlxx244"; depends=[IRanges rtracklayer]; }; - GGdata = derive2 { name="GGdata"; version="1.26.0"; sha256="03klh3yczfba83yh7350jwn1dqq1bi8lgx9h1bqilhc36plz14k5"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; - GIGSEAdata = derive2 { name="GIGSEAdata"; version="1.6.0"; sha256="02pjidn3sz6z6zy8p8wp5nmin5cmjglddq035bbxzxbx6npb7mxk"; depends=[]; }; - GSBenchMark = derive2 { name="GSBenchMark"; version="1.8.0"; sha256="1cwgrfyjjz5l33qcya2vd9c2d89ma8053yz1yv5z1pvrfagdanli"; depends=[]; }; - GSE62944 = derive2 { name="GSE62944"; version="1.16.0"; sha256="0s5nf9qi940qx8vsmybva0v4yphg4s0nm8if0p2ipw4ignkayf09"; depends=[Biobase GEOquery]; }; - GSVAdata = derive2 { name="GSVAdata"; version="1.24.0"; sha256="17z2b7waggy4xv3bx92yhv53sgc4w7im5rq3mygdb91p1swqsgmc"; depends=[Biobase GSEABase hgu95a_db]; }; - GWASdata = derive2 { name="GWASdata"; version="1.26.0"; sha256="0az9vxafbdjm01ysz4zid8iglgddl81kfxg70zgrx6sal47kc4lz"; depends=[GWASTools]; }; - GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.16.0"; sha256="0df0231l3cpdf2n2bcm6wjs7nmbl96h4rajicba03r1a92ii0v6b"; depends=[]; }; - HCAData = derive2 { name="HCAData"; version="1.4.0"; sha256="16w6707dhw260m0f1n7nxf4k3g18qn3l7nmg9wqkdiwlczwhx8rz"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; - HD2013SGI = derive2 { name="HD2013SGI"; version="1.28.0"; sha256="0ygz008dmhhd2sr2qpvqcha7jr5k3mr64w25pbjil2gx2lqz8lbw"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; - HDCytoData = derive2 { name="HDCytoData"; version="1.8.0"; sha256="1kj4hkl814a69pz9m2ifim14nwr3w6sw6mhwiv7y4ifv4hbvyd01"; depends=[ExperimentHub flowCore SummarizedExperiment]; }; - HEEBOdata = derive2 { name="HEEBOdata"; version="1.26.0"; sha256="0mh6v6g24jm966d0nsrwcv52km72qi8jal6ann6qfa0qwvcbhr6m"; depends=[]; }; - HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.28.0"; sha256="0gxmg00xaafq3yz9zqqsyn19p3n8rlmy6q623xzssn7nvgggffsi"; depends=[]; }; - HMP16SData = derive2 { name="HMP16SData"; version="1.8.2"; sha256="1hfh9k9782irs2d7yp427x9x85mn4d6axvil9n7pa8a0s8b1f013"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors stringr SummarizedExperiment tibble]; }; - HMP2Data = derive2 { name="HMP2Data"; version="1.1.0"; sha256="1vlq98g07vx4vx59mrclw3cimwvdxn60r510jfjnlb5nky1pasnj"; depends=[AnnotationHub assertthat data_table dplyr ExperimentHub kableExtra knitr magrittr MultiAssayExperiment phyloseq readr S4Vectors SummarizedExperiment]; }; - HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.8.0"; sha256="1d28ca12m0qc83f3jpd9n4h1d71vgfix7q770hg84aljx9xifmmc"; depends=[]; }; - HarmanData = derive2 { name="HarmanData"; version="1.16.0"; sha256="0snci97jrgk98yyjjbfm9659fq2iiabfpdx08iriv0lgf1k674zz"; depends=[]; }; - HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.10.0"; sha256="09xacn52wxgm31l9vjbbba19f975b8dwxhxv2bfjy61q73qsfxnj"; depends=[ExperimentHub]; }; - HelloRangesData = derive2 { name="HelloRangesData"; version="1.14.0"; sha256="1gx94wps1cb0ma0gsmnw9vcb03wv7f9m4kjmaiwj1p3awmvjlzlp"; depends=[]; }; - HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.8.0"; sha256="02fsfq716vfxcwczzdrarwqmmy739mxsrdhr13zvprppa2jw9mji"; depends=[]; }; - HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.24.0"; sha256="1sr250gypp2wyi12jq0k72w3galbi3sq00pgsq34habngr1ladzp"; depends=[]; }; - HighlyReplicatedRNASeq = derive2 { name="HighlyReplicatedRNASeq"; version="1.0.0"; sha256="04wr6phglmms6s8dnpr03kdq3dba8vipx5w3qp8fkiha3f9b3pdi"; depends=[ExperimentHub S4Vectors SummarizedExperiment]; }; - Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.24.0"; sha256="14hqlkyz4xp1jmhgmfy76dw5f3la2xcsz6pzdr7jn525bwmh4np3"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; - HumanAffyData = derive2 { name="HumanAffyData"; version="1.14.0"; sha256="0jgg1xlf699q89bx7scpibr905vi77yk59290b724y2qrimjg4na"; depends=[Biobase ExperimentHub]; }; - IHWpaper = derive2 { name="IHWpaper"; version="1.16.1"; sha256="0jfvx364zf5kbl5l8iff48ng9732d8c598n0b2yzz9glkja5w3wb"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; - ITALICSData = derive2 { name="ITALICSData"; version="2.26.0"; sha256="0s4b2j78ni8nwnzh7xlj1aacq522awvlp20isrx25nhnmnq3nbjn"; depends=[]; }; - Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.24.0"; sha256="1gmk5mknbqp3h21cqqqrhglpnm5f04ifliv46bns1k2rndx1d68c"; depends=[]; }; - IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.26.0"; sha256="0v6y52azp4a2x356kq2hqisnn581jhvyi02av4zjnxvr3h6qbh7j"; depends=[]; }; - Iyer517 = derive2 { name="Iyer517"; version="1.30.0"; sha256="0nrjbr9qnqnsmbn3i0kn9zg0m216f7xjm4jwpnlpcwacsz3x355r"; depends=[Biobase]; }; - JASPAR2014 = derive2 { name="JASPAR2014"; version="1.24.0"; sha256="1scrv91vy9i1fh2r15qkr1f0j78v211y366271ivwbf1r361npdn"; depends=[Biostrings]; }; - JASPAR2016 = derive2 { name="JASPAR2016"; version="1.16.0"; sha256="18sna9lly7yvgn317lpvgv2b4xm1cdv7lwcrvr3cf47mbwh7sj08"; depends=[]; }; - JctSeqData = derive2 { name="JctSeqData"; version="1.18.0"; sha256="096g9z3kmivn1vhgrz7blba0w5fchcivxd6zr132q24f9qciggyk"; depends=[]; }; - KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.8.0"; sha256="05a6lf3vxlzy91d90mmbnzl2kk30g2z3ql96n404hiplq0gp888j"; depends=[Biobase BiocGenerics]; }; - KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.26.0"; sha256="1brsghk3883f257v41kxqx7xmf6rmcvmhzlwx8527i7nnyk5yfp9"; depends=[Biobase BiocGenerics]; }; - KOdata = derive2 { name="KOdata"; version="1.14.0"; sha256="0wyaccdm6sj8qlzqdg44q45icnflnwrkajjav2pbpfi6wf055xna"; depends=[]; }; - LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.26.0"; sha256="0c4bv2dq153mg2a5rjshcmsbjl0jjx8ic6b8w6bjymqj823r73d7"; depends=[IRanges KernSmooth]; }; - ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.20.0"; sha256="1vklgv9ajsdmzmrqz1iah3bf19x91y8nzxxbfh4lbiw8si2c2rfr"; depends=[methylPipe]; }; - LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.24.0"; sha256="0w27kpa8a96sb94wvp801yll2g0cwyvkpfizfgxfrcd9grznwcmm"; depends=[]; }; - LungCancerLines = derive2 { name="LungCancerLines"; version="0.26.0"; sha256="0baapfr8w4718qh4kfx8x8jfi4qaif4blzl27g76zyqcm801y13m"; depends=[Rsamtools]; }; - M3DExampleData = derive2 { name="M3DExampleData"; version="1.14.0"; sha256="1l42jqdi25g3w08aiivs3swbk48sipfhc9ddpal4fimylr453w9h"; depends=[]; }; - MAQCsubset = derive2 { name="MAQCsubset"; version="1.26.0"; sha256="1lwzcy6ln722ixrcrrvhardkxpqsjyrlyfqpsj5za3m23mxln9hl"; depends=[affy Biobase lumi]; }; - MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.26.0"; sha256="1g2abaij70wqsxs49cirayx2w9za4x6bq0c6c1q7y14ii9a8sj0p"; depends=[affy Biobase]; }; - MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.26.0"; sha256="0dm00hr7p3dgyhcj6s4cgcx8pjv366fix5pr0arfm0zgl4gby1p4"; depends=[Biobase lumi]; }; - MEDIPSData = derive2 { name="MEDIPSData"; version="1.24.0"; sha256="17cv7nis0dlj4qvvp114akywq79my0z5dhn13mm2yz8x492s7dy4"; depends=[]; }; - MEEBOdata = derive2 { name="MEEBOdata"; version="1.26.0"; sha256="0rcw9ashljvdf1jsn6kyc36vrz3a8fsphmvabxc4b0plzx05brsv"; depends=[]; }; - MIGSAdata = derive2 { name="MIGSAdata"; version="1.12.0"; sha256="1mib6nibcxkjsf9hvf3q2sw6kbzyikfh6a663wf6awl0s876jlq1"; depends=[]; }; - MMAPPR2data = derive2 { name="MMAPPR2data"; version="1.2.0"; sha256="0fczp8mbn4g7s1kfnw5bq7h4rydpwqg9nsad0vyafcn4vcpy05zg"; depends=[Rsamtools]; }; - MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.24.0"; sha256="118wxhj8gdprwkk8mr72d9sz3gx6lcz50s41yq6hkjcghpvpkba0"; depends=[]; }; - MOFAdata = derive2 { name="MOFAdata"; version="1.4.0"; sha256="0z52zmhwvdvdk2ngq31c8v98lmy531ygvl29nsaj9sxhjkj7m7cl"; depends=[]; }; - MSMB = derive2 { name="MSMB"; version="1.6.0"; sha256="0wbn9mn0aiqfm5g4qrbypz8yprz3wn6162nv398zpgz3c671380y"; depends=[]; }; - MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.10.0"; sha256="1np673w9ga64djlxkbazkdbl9ng8fm5s3s660i61iblgkv808n3c"; depends=[]; }; - MTseekerData = derive2 { name="MTseekerData"; version="1.6.0"; sha256="0hi3347c9sk89zmr6s07ny4s03q9v2iy0ycz7cl3jf9dwdm4kiy1"; depends=[GenomeInfoDb GenomicFeatures GenomicRanges Homo_sapiens IRanges VariantAnnotation]; }; - MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.8.0"; sha256="1yhnkbdac4nb70w1lv7j2hhzcpsd7c6860pcjf0mkahvh1w6fb3s"; depends=[]; }; - MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.8.0"; sha256="0pksmm6wh8p6jqvv7r4yfwdbgpzjfjjcck61907dckbkq1s5jpsk"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; - MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.8.0"; sha256="0xx86g0x20r4x5p9ab9p2qyzsnjflg3cslfhgywcagr9k5ydbgbs"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; - MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.8.0"; sha256="08skv2gyiwrbqyigfcbdnajb5945lv0f6q9sydkkiwm2kgikipqx"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; - MethylAidData = derive2 { name="MethylAidData"; version="1.20.0"; sha256="1mvw87x8qd63jkh32kb1vnpwh7lyvs4pdiiyvalsvlm6xrz4izgh"; depends=[MethylAid]; }; - MouseGastrulationData = derive2 { name="MouseGastrulationData"; version="1.2.0"; sha256="1658qxjr2i5i1iwvcn74xasiysa0mq0d3y7j0536dq5dqb639262"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment SummarizedExperiment]; }; - NCIgraphData = derive2 { name="NCIgraphData"; version="1.24.0"; sha256="00v5sip4q08hvwsl32yflsvqwkm5cldcp2ys639rgjcyy2ygyyl1"; depends=[]; }; - NGScopyData = derive2 { name="NGScopyData"; version="1.8.0"; sha256="0lm0kkk0pqxqbwyiv61irljbhkqcamyl96fzp5xx8kzvzqjvgnkq"; depends=[]; }; - NestLink = derive2 { name="NestLink"; version="1.4.0"; sha256="1scfix1qlih2fvp1ib6j833m833328phr49q750v9w06sxgq8qii"; depends=[AnnotationHub Biostrings ExperimentHub gplots protViz ShortRead]; }; - Neve2006 = derive2 { name="Neve2006"; version="0.26.0"; sha256="1xq35758qpwyy6wcniw2pdiv4bl3i9kawgzg2zlspkf14m4kxsyq"; depends=[annotate Biobase hgu133a_db]; }; - OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="1.6.0"; sha256="1jjxk97g58m1jly0sn99js6zgaamj1zidp3p6pjcipdr30gfgmin"; depends=[MultiAssayExperiment]; }; - OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.10.0"; sha256="1xpj66ab743nw486ixp6ijv59xy2g5jb07aafynpbn87mjq4f4yj"; depends=[rJava]; }; - PCHiCdata = derive2 { name="PCHiCdata"; version="1.16.0"; sha256="0cvg4mmpnkbicm2n678b31ji8gg828af2s2i3191dz2h1smg0938"; depends=[Chicago]; }; - PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.28.0"; sha256="1f4xnk11i5pgckglkrc4fp80x07aw318a0kr2lgdm9xm54ilvdn5"; depends=[affy annotate Biobase PREDA]; }; - PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.22.0"; sha256="0djlc83x67822fph717xx8lcx6qblpqvvb7ja5910fl3flqbf0w6"; depends=[PWMEnrich]; }; - PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.22.0"; sha256="1hgy7zjd057gxdxibi111nyzpsawkxs5a9jsrpxdrz378l0vg2b5"; depends=[PWMEnrich]; }; - PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.22.0"; sha256="1hp0n6790i6rhwx4x2kvf9bs0lwyx6jd394jf6rly889yysl7zyl"; depends=[PWMEnrich]; }; - PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.16.0"; sha256="1ml9fcpcah0w9rk0mmymjcsp16vnz60dry2r4bjxfi73m0qbr5l9"; depends=[]; }; - PathNetData = derive2 { name="PathNetData"; version="1.24.0"; sha256="1hb1gq35h4rnhzm00dk77la3y7imqhp9qg15akag5cx30pn4dqmz"; depends=[]; }; - PepsNMRData = derive2 { name="PepsNMRData"; version="1.6.0"; sha256="1j2z4ks355c2vnm6m0bk1b3yq73mi1pp9z7j39jll4arv7kmrm3g"; depends=[]; }; - PhyloProfileData = derive2 { name="PhyloProfileData"; version="1.2.0"; sha256="1cn3y9mcrrh0yq2bsks16w3c041f5pir40zar86f25br7bw7kbas"; depends=[Biostrings ExperimentHub]; }; - ProData = derive2 { name="ProData"; version="1.26.0"; sha256="0vs4ybckr0bk7hcl1y2afp1rd1h0nya281pjs65dc4pcw6qhv32w"; depends=[Biobase]; }; - PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.14.0"; sha256="04h5gidmi0vwhs8vlg7kvijz938dk8ljf33r4xr84axvjlh3wh7w"; depends=[CAMERA LOBSTAHS xcms]; }; - QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.18.0"; sha256="05p10rm93625lh0gv6wvfdvvqz526q35p4mgih6d1mgm90kx099v"; depends=[QDNAseq]; }; - QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.18.0"; sha256="0jpdvd9s2g2fi4wdmbriz18spngbhny66v2b417mcjjlm4vqssv9"; depends=[QDNAseq]; }; - QUBICdata = derive2 { name="QUBICdata"; version="1.16.0"; sha256="1ya6r7fggwpfk8g7cv1f6x4aaarl5m625ch1rx6hw2mrjwazjgkb"; depends=[]; }; - RGMQLlib = derive2 { name="RGMQLlib"; version="1.8.0"; sha256="099gi4aykzkl4p0gs7w655rhrvyb295x2038szwbl7k0801ffjnd"; depends=[]; }; - RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.24.0"; sha256="019jfgv6pk93cwkgq4wpq850ff7269s793vdg91amwpbq4z4ff2i"; depends=[]; }; - RITANdata = derive2 { name="RITANdata"; version="1.12.0"; sha256="16ysc6aaqb6y7prckbbbshl5g41hill43gp273j9mhgn9yqrd66s"; depends=[]; }; - RMassBankData = derive2 { name="RMassBankData"; version="1.26.0"; sha256="1v9by52hzncm54zw7rwjpw91anmbwaihkmh0qih44jh1l0zv3il8"; depends=[]; }; - RNASeqRData = derive2 { name="RNASeqRData"; version="1.6.0"; sha256="14g6ylmi3r4iv30sxdv4kl8c2fvkwng4z5b60dsiwm276ywd3ggs"; depends=[]; }; - RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.25.0"; sha256="0a8yki07p27bv6zhsys2l8yyx21742kb9pnvz0rhf3ynh3bdapd6"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; - RNAmodR_Data = derive2 { name="RNAmodR.Data"; version="1.2.0"; sha256="1kzqw9jfjccviz7gaw19rkha3a8k1x9wmmdf8wlnbpfwv6f58m74"; depends=[ExperimentHub ExperimentHubData]; }; - RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.26.0"; sha256="0hc6kj732wvbg245zip12g7h04pj30wi8abkg00fdnqgrmd7l6d0"; depends=[]; }; - RRBSdata = derive2 { name="RRBSdata"; version="1.8.0"; sha256="1aa374gmq6hv59qxsnsgigivaa56062g7byykag0vnwy907s3jpm"; depends=[BiSeq]; }; - RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.16.0"; sha256="0yzq8h34c5v1hrwm944nz2iafzra2gqw94d3adz4q1vaggrv4n8d"; depends=[RTCGA]; }; - RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.16.0"; sha256="05fz5zy0y7g0ixv400z1cxrlwhqw6dhnyx5j5mnxw7d2w3zwwndg"; depends=[RTCGA]; }; - RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.16.0"; sha256="18vgrvfbcsa20jyaxyi645ipg1ybfvgdnjq3d6dfg0n06fvxslnd"; depends=[RTCGA]; }; - RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.18.0"; sha256="1p5a2667hrp0c5ip9lkil9g1ql5538g513n7x6ns9yjgxrlplmww"; depends=[RTCGA]; }; - RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.16.0"; sha256="0s0l7z2bvjhifqzllc6r57pki9pfn6kmzsk219xmjalc91i4p7id"; depends=[RTCGA]; }; - RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.16.0"; sha256="1z1vxcahxzxygy5l86bcx48a3bfk22c6w8dlp12sdwkj9qx4rsd9"; depends=[RTCGA]; }; - RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.16.0"; sha256="15bmd2208nj4hbqivqq7fi3fggbip0y15q5nf9dncvglrfk80yjs"; depends=[RTCGA]; }; - RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.18.0"; sha256="0klm1gxl45f8ipwisv0y72cicv55mffwd90y3m8vlacxhan4v6my"; depends=[RTCGA]; }; - RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.18.0"; sha256="0iyn91f2dblnyd3xpp6xlq2cnkd2imw87h985qxs5v8nb2xar0wq"; depends=[RTCGA]; }; - RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.8.0"; sha256="12rffpfgradgv9dgiv7gi7rbiyx8fy01fv993qqv7dnz2wpzy8zc"; depends=[Biobase]; }; - RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.8.0"; sha256="0flqmdg4wxyr5mv71rhks4jcbya8d0v8qz6iqa6c2qabmrl4sflx"; depends=[data_table]; }; - ReactomeGSA_data = derive2 { name="ReactomeGSA.data"; version="1.2.0"; sha256="08v9prz162rf5i01lwv60k6k8skx2qxmpw4z8g6w5n67d5ap1wls"; depends=[edgeR limma ReactomeGSA Seurat]; }; - RegParallel = derive2 { name="RegParallel"; version="1.6.0"; sha256="1b3x8547cwv38wzfqrvkh9jrmzamn7wfm1sk2nk3i0xrhqh6jqaf"; depends=[arm data_table doParallel foreach iterators stringr survival]; }; - RforProteomics = derive2 { name="RforProteomics"; version="1.26.0"; sha256="1javba8cqjnczprvd2lk36xy9yr2cxyj69gapqi4x1h0z274hjz9"; depends=[BiocManager biocViews MSnbase R_utils shiny]; }; - RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.20.0"; sha256="12g0fnmcv5lk0v96zrfzk594krrsrma8svwqv28lg6b1fvkaggcg"; depends=[GenomicRanges]; }; - RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.20.0"; sha256="18p8lfn2m5m5f79nyfzvp47ipgdfxqzsf1hlsgn4jsl7k1dn4gby"; depends=[GenomicRanges]; }; - RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.20.0"; sha256="1wn05pycjx3waa4327g4krr3ih91rfh6v8r70wj7d536lc4zgvvs"; depends=[GenomicRanges]; }; - RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.20.0"; sha256="1006k83ck6mvh1awczzd3bpkprl9611faicxxaxy7mghg15xn9s2"; depends=[GenomicRanges]; }; - RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.20.0"; sha256="1l4jgs7rvjbdyrnh8ax8yaqbz6nd3mxq6sagc0jx6g64imc0rr49"; depends=[GenomicRanges]; }; - RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.20.0"; sha256="0ylrg1zlzp7k54n2yhnxm222h671ci9p9bfllkp66rjyjrrb4kpk"; depends=[edgeR]; }; - SBGNview_data = derive2 { name="SBGNview.data"; version="1.2.0"; sha256="114fq1pqlc29ydl0gvwcbnls7lb4bzx5gc0bz8plm2r5a46dqr1k"; depends=[knitr rmarkdown]; }; - SCLCBam = derive2 { name="SCLCBam"; version="1.20.0"; sha256="17xmaazysshijcdpchk6aab99kdiinyw2mb7r7v3w1043yl3a6dj"; depends=[]; }; - SNAData = derive2 { name="SNAData"; version="1.34.0"; sha256="0fi6zdhfhdxgimm3pdn6d1q1bjk13nw1nnc7gmvlk1a4nd3j8g86"; depends=[graph]; }; - SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.24.0"; sha256="09z76j2cdqnxn6bs0sazhayfk9a7qr2j5x678hnqqpwr255jr8w3"; depends=[]; }; - SNPhoodData = derive2 { name="SNPhoodData"; version="1.18.0"; sha256="1abiqn5p1cr4wrzakpvqirhj40g9airav1vi0n568832mqclsdwk"; depends=[]; }; - SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.20.0"; sha256="172hgkh6s4lj9hdh5wr6k12w2nr60g2q5ra0r5d06vs96ha8cwzl"; depends=[]; }; - Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.16.0"; sha256="1liw2d0x1yf7jdizarb98f5jaw0a721qqhxgbva7923rmn9bh05q"; depends=[]; }; - SingleCellMultiModal = derive2 { name="SingleCellMultiModal"; version="1.0.0"; sha256="17hxan83zzya08csandpa0xrhla0wkhii8mc19yrlzqbnl5r5v1g"; depends=[AnnotationHub BiocFileCache ExperimentHub MultiAssayExperiment rappdirs]; }; - SomatiCAData = derive2 { name="SomatiCAData"; version="1.26.0"; sha256="1sz2qdn23dnr5hbif6yv0r19b7db9v5vs9sqrjj0nid93lqxmzqy"; depends=[]; }; - SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.24.0"; sha256="1innxq39svlrw8v3qnnr3crf49jmj7pvymbh3bp14hhx12ylrvk5"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; }; - SpikeIn = derive2 { name="SpikeIn"; version="1.30.0"; sha256="0xnb93q0wrd41x2lgmcraphz27v5ric9qn1cs2459f83hsl3ngj2"; depends=[affy]; }; - SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.28.0"; sha256="0a42i0kixgxixr1fbm0vnzl08yhaxl2zrxkq9pvwsid6sjxnzbbg"; depends=[affy Biobase]; }; - TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.24.0"; sha256="0h5rpwzqwa982m32kasyaj676hpd4pv0n4wba328m9shwcx0zlqi"; depends=[Rsamtools xtable]; }; - TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.24.0"; sha256="18z3pn5x00kdhg085ai7r592n6gpbaib6g1i3q1859v82hnn8k3l"; depends=[]; }; - TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.12.0"; sha256="1185s7dmdn3xhdip1q2vilqhvckqszywsrfk47yrqaacc0mbnbgk"; depends=[SummarizedExperiment]; }; - TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.8.0"; sha256="060kxhrw00c3mj2fdp49zws7dz9wqc2p96zv1ikvnccqfd7f2ps8"; depends=[]; }; - TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.8.0"; sha256="0jyhk5arr73pvcvqfra9rvm7pwhbgr67ls9nszkm8jxhb8jvzv5l"; depends=[Biobase]; }; - TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.8.0"; sha256="1a7kawwihqvh06p3l9yfv9d05rv1nwh8vfpmm6553ddmxpkfmfa3"; depends=[Biobase]; }; - TENxBUSData = derive2 { name="TENxBUSData"; version="1.2.1"; sha256="0cg1xii1zfilw64nkvfs0gsgys3aabnvkhhbkfdvqahp2ayhi7lb"; depends=[AnnotationHub BiocGenerics ExperimentHub]; }; - TENxBrainData = derive2 { name="TENxBrainData"; version="1.8.0"; sha256="1mx07z95s29d02j0imqmvhf9v15j8qplggp233k3c6dgxlxbd8rg"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; - TENxPBMCData = derive2 { name="TENxPBMCData"; version="1.6.0"; sha256="1ivps0sbw59ha8vha1wnnz92srnvp1pvybysi4fjb7w08xs0iyif"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; - TabulaMurisData = derive2 { name="TabulaMurisData"; version="1.6.0"; sha256="1nnwm0irg6qy8jkldw42w3yvk9jmpy0gm4ymiw127wv6kfvqcb67"; depends=[ExperimentHub]; }; - TargetScoreData = derive2 { name="TargetScoreData"; version="1.24.0"; sha256="1p554n42c8vsva09mwcvvvgr0xbmyyayv3shq3dr9lbh6q3k9vwi"; depends=[]; }; - TargetSearchData = derive2 { name="TargetSearchData"; version="1.26.0"; sha256="16dai2fg0m6mya001i7m2z8bg6sf3ny3lqwpdlkm3panxh3w29v0"; depends=[]; }; - TimerQuant = derive2 { name="TimerQuant"; version="1.18.0"; sha256="06qr5byggasym0k9hv5f992swf59951hg2z9p9d1gkvjgp5i8hl0"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; - VariantToolsData = derive2 { name="VariantToolsData"; version="1.12.0"; sha256="0jj2gwyxj8rsw2wcz0s7zniry9kylch4mzi1y31mhh18f3wwc36i"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; }; - WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.20.0"; sha256="0g6ykbx3kyf4misa2k7wsikdfjxk8lachfkhc22iz7xlglnlmw0p"; depends=[]; }; - WGSmapp = derive2 { name="WGSmapp"; version="1.0.0"; sha256="0y3ar2mrsqbryd5m3nampfc6jz11ilnfgfkydz1nwr01kblngzak"; depends=[GenomicRanges]; }; - XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.26.0"; sha256="106wdzm446yzcnxgkfpm1mfcmn1glbwal9ha2bdn9blmhks2bj2x"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; - adductData = derive2 { name="adductData"; version="1.4.0"; sha256="1s807spkvzmhqcjcdv2njydip3z3d0zk1h3cp860qyqni90q754w"; depends=[AnnotationHub ExperimentHub]; }; - affycompData = derive2 { name="affycompData"; version="1.26.0"; sha256="0sjhvh1sf2l6ik1qa679mkj2flw5gn1ysnmbph9806368s42yb2s"; depends=[affycomp Biobase]; }; - affydata = derive2 { name="affydata"; version="1.36.0"; sha256="1dnf6a04q05sxm2ki53nhk2jg4w7k8i40faligckai0nr2xikp8l"; depends=[affy]; }; - airway = derive2 { name="airway"; version="1.8.0"; sha256="1h93izcpw2lqljaw158bw8n1mqkxrblrsz5nwiix4ssksx062daa"; depends=[SummarizedExperiment]; }; - alpineData = derive2 { name="alpineData"; version="1.14.0"; sha256="1rzafq05m4fymwdzl5i5i0svpq4f36gg1wpcdcslrpxc7pc47izx"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; }; - antiProfilesData = derive2 { name="antiProfilesData"; version="1.24.0"; sha256="1rrw4s2nzyqf6fryl356nn0928lqrd0igknqjsv1v05iqkimr81j"; depends=[Biobase]; }; - aracne_networks = derive2 { name="aracne.networks"; version="1.14.0"; sha256="1463x7qn32vhv3sglz6zdg5ld4fna6f6sgbggrljj5965ad836vq"; depends=[viper]; }; - bcellViper = derive2 { name="bcellViper"; version="1.24.0"; sha256="15sjqfxggvh937c4w7rw7wnywb5876809kj4amv7vi0sg868jiv0"; depends=[Biobase]; }; - beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.26.0"; sha256="1r678xrzb6i6j8fr75b2pf9vns9w4kwicg9kf513a7a83b075n4k"; depends=[beadarray Biobase]; }; - benchmarkfdrData2019 = derive2 { name="benchmarkfdrData2019"; version="1.2.0"; sha256="0yjvb8qih0fpp93pf5w3ilrpsm1vzqhmcjhb1sqd7875jpas9a4d"; depends=[ExperimentHub SummarizedExperiment]; }; - beta7 = derive2 { name="beta7"; version="1.26.0"; sha256="1nf8wds7mksjyyrfvvs3q501mm5van7jbsfxyna27bv0dmbcv49c"; depends=[marray]; }; - biotmleData = derive2 { name="biotmleData"; version="1.12.0"; sha256="1bdn1j4f6cfpncbgnzmrgb1jnffn5pxjznj8nyjdzyapgz6gy4d9"; depends=[]; }; - biscuiteerData = derive2 { name="biscuiteerData"; version="1.2.0"; sha256="0dd4kym1gxkjlf1s4lcjsxikvanzbnvqphxin9zb3j99wi7h98f8"; depends=[AnnotationHub curl ExperimentHub]; }; - bladderbatch = derive2 { name="bladderbatch"; version="1.26.0"; sha256="1xlqi32a5b84m31xn9x8sgrsdprylk8w2prbdn2y2lj75vyqislw"; depends=[Biobase]; }; - blimaTestingData = derive2 { name="blimaTestingData"; version="1.8.0"; sha256="1ibpmbyhnliiwllwdpysl1897c93l98zdi4283174r6q1w9iwnwk"; depends=[]; }; - bodymapRat = derive2 { name="bodymapRat"; version="1.4.0"; sha256="1dfrm68ysqm4z90zrvxas1mf53anfrk6mji9823088lj8haabxvn"; depends=[ExperimentHub SummarizedExperiment]; }; - brainImageRdata = derive2 { name="brainImageRdata"; version="1.6.0"; sha256="0146rn8hmnmvfbnmqwr20wx76k3m6qii5rsqdqmcf420zhdfasnv"; depends=[ExperimentHub]; }; - breakpointRdata = derive2 { name="breakpointRdata"; version="1.6.0"; sha256="0s96amrb0z4zz1xg3dd2wf9yir3g9xlj43sbfgcffa02hr2lvql0"; depends=[]; }; - breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.26.0"; sha256="1bi9522c64yngil2153qsd5la6lmn41992vlzpcadq79c2gdm5sz"; depends=[]; }; - breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.26.0"; sha256="0lkwgp8qwd869bc7wz5vx11fjk48516waf5d5r79ch7qzic50yqa"; depends=[]; }; - breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.26.0"; sha256="189q6qggq08mcvj0ail7vilsiyirxwkvwhfwwrzms6lg9bdav0a5"; depends=[]; }; - breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.26.0"; sha256="1s6zdhdnrigfnhyjajb9m1hsi3ggg7rs3wvyfxhzdbg5v9jwlkgx"; depends=[]; }; - breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.26.0"; sha256="1ax8czbxh7kid1kb1p6skkiprqm1pjpyijnci4sp6pvldna5ksm9"; depends=[]; }; - breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.26.0"; sha256="0a147jqwkwxlcf4id75i0wpz3mp9ynhvpmyw6kq7ksagk05zv2iy"; depends=[]; }; - brgedata = derive2 { name="brgedata"; version="1.10.0"; sha256="1asi6867lp17gh3j6dg1d11mgk9mkym4s00hpfscp9zlayzqaahp"; depends=[Biobase SummarizedExperiment]; }; - bronchialIL13 = derive2 { name="bronchialIL13"; version="1.26.0"; sha256="11im58z1fahy2r832r00wymjbf03hbafslzc5hicd53jgscviks0"; depends=[affy]; }; - bsseqData = derive2 { name="bsseqData"; version="0.26.0"; sha256="0nzfk1q35hh2k2wcsfsyvhr8n5b7rzvgqpk4ysakm7x0n3yllvr1"; depends=[bsseq]; }; - cMap2data = derive2 { name="cMap2data"; version="1.24.0"; sha256="02m7r1ixmwr119xx58j7xdmrac8banm833hg1q2jclzlxqkby1iq"; depends=[]; }; - cancerdata = derive2 { name="cancerdata"; version="1.26.0"; sha256="1l0vdrfxi452p79f40gkj88ikmlb0d764hz9iyfz5gcqimn4ziiw"; depends=[Biobase]; }; - ccTutorial = derive2 { name="ccTutorial"; version="1.26.0"; sha256="13b7b2h0viyyrhqfr9marjpy9svbqvnfkz0hfxizg267106kvdpr"; depends=[affy Biobase Ringo topGO]; }; - ccdata = derive2 { name="ccdata"; version="1.14.0"; sha256="16hzrzrq61rn0946rv7ikk5b2xy2vc7s67jsv5wlvj19s58z5ki9"; depends=[]; }; - celarefData = derive2 { name="celarefData"; version="1.6.0"; sha256="0j7w6z56snrvlxpp5f47s71pmfk5xbp9fjl5sdkvas04979004if"; depends=[]; }; - ceu1kg = derive2 { name="ceu1kg"; version="0.26.0"; sha256="0ll5chmqcdlj99pqiy5mdlj46igb7xkvqj8hn32m4rxx60wjkki1"; depends=[Biobase GGBase GGtools]; }; - ceu1kgv = derive2 { name="ceu1kgv"; version="0.30.0"; sha256="0hrspymdgmck1nack5bc9lpkdcbp2mmh4w64xmyppw2znzknwd62"; depends=[Biobase GGBase]; }; - ceuhm3 = derive2 { name="ceuhm3"; version="0.26.0"; sha256="17gkhk8z1hd6grsbqf4m7s4avnl7jn3zpmg4zh5fz6s890k0w6p8"; depends=[Biobase GGBase GGtools]; }; - cgdv17 = derive2 { name="cgdv17"; version="0.26.0"; sha256="0vlv33kpimlpms14c027z2h5fwavwkdk0sz4yr4wk3mr0sdcblyv"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; - chipenrich_data = derive2 { name="chipenrich.data"; version="2.12.0"; sha256="1ni6lrd5pr2pz6wkf7f8b9vzsiahnn266y21rnxgr2avvdmbzn46"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; }; - chipseqDBData = derive2 { name="chipseqDBData"; version="1.4.0"; sha256="0q5d20zhr0zdba18afbladrw4qn5vifkdpxi10xg3a50b3i0x5y2"; depends=[AnnotationHub ExperimentHub S4Vectors]; }; - chromstaRData = derive2 { name="chromstaRData"; version="1.14.0"; sha256="0if9qiclyyf1jzf3fvj2kn9qs3xisi7py0vy24qqxp3wfahmnd1r"; depends=[]; }; - cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.24.0"; sha256="03xi5zxrmcwpnacay0j5v9fw4m3jndifyxnpc6dbv5vs64yilnqp"; depends=[cnvGSA]; }; - colonCA = derive2 { name="colonCA"; version="1.30.0"; sha256="0m039gz0qic38zpmmjahbfn5yqh76win0pn2492gpr79z7jglspw"; depends=[Biobase]; }; - curatedAdipoArray = derive2 { name="curatedAdipoArray"; version="1.0.0"; sha256="062nkhxscs7kvdy9aa0l6ygpjchjvjr65myabdbpn1kd6ixbhk00"; depends=[]; }; - curatedAdipoChIP = derive2 { name="curatedAdipoChIP"; version="1.4.0"; sha256="1sqg4wjmr17fyv94z3gyvxvvjjpys8y89k5ihmlk6l8v995vk1wd"; depends=[ExperimentHub SummarizedExperiment]; }; - curatedAdipoRNA = derive2 { name="curatedAdipoRNA"; version="1.4.0"; sha256="1arjh69ag7n8gqzpl61i9ibn0gkdl002a8rkczvp20w4fdzlz02l"; depends=[SummarizedExperiment]; }; - curatedBladderData = derive2 { name="curatedBladderData"; version="1.24.0"; sha256="0j4gssv9wd5rzsx4pbhsjciy5fc87b9hhg8cia6cliyy33fg21gz"; depends=[affy]; }; - curatedBreastData = derive2 { name="curatedBreastData"; version="2.16.0"; sha256="0sahjrgq9b77xki5l51pz25ky2g13m31q7b3jc6jvggz9xmx9vyy"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; - curatedCRCData = derive2 { name="curatedCRCData"; version="2.20.0"; sha256="0bcfa5w6sqabz35npl2vmrj35ymgciiqkcgjhplm0ngimsm9f0wn"; depends=[BiocGenerics nlme]; }; - curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.18.2"; sha256="02m06scv1wxvh858bpxwlvwz4lf0qmvd8246axx65d2ln5fkvrc9"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; }; - curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.26.0"; sha256="0wvpbagh9v1lyc9rsvymzy38r18g23yajvis1pj0rl7wa0zk2p4x"; depends=[affy BiocGenerics]; }; - curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.10.1"; sha256="05vlj0ivd9dym0078cjd3wswkmqsa7k5ffkl792fw9r5246s9dqc"; depends=[AnnotationHub ExperimentHub HDF5Array MultiAssayExperiment S4Vectors SummarizedExperiment]; }; - davidTiling = derive2 { name="davidTiling"; version="1.28.0"; sha256="0cqkz6rlkk2a3fsaa736s731lb3mdvpqzd6ywff2l1wkdza7n3ha"; depends=[Biobase GO_db tilingArray]; }; - depmap = derive2 { name="depmap"; version="1.2.0"; sha256="0ymdfkddrl3rbini83528x2ah8lvlvy0ard9m303dkpg5b90axim"; depends=[AnnotationHub dplyr ExperimentHub]; }; - derfinderData = derive2 { name="derfinderData"; version="2.6.0"; sha256="1kbdwwdn7ykrdm36bqd8hnj0rw9ikcnxwg0w1xdc5caqmxsg1w8h"; depends=[]; }; - diffloopdata = derive2 { name="diffloopdata"; version="1.16.0"; sha256="03rl0ffl9103zi3mk028l79vhlpnlybx0hnl8x9fsxnqkx1rkj32"; depends=[]; }; - diggitdata = derive2 { name="diggitdata"; version="1.20.0"; sha256="0wb6g9q5m2cjnxnpz2aralridmsdmd70lp1iwszdl6qc2634c2bc"; depends=[Biobase viper]; }; - dorothea = derive2 { name="dorothea"; version="1.0.1"; sha256="189j44hfc12bf3r28hjm2wnigb9k4mmpwp6wnbxyx69nci3jh4zj"; depends=[bcellViper dplyr magrittr]; }; - dressCheck = derive2 { name="dressCheck"; version="0.26.0"; sha256="0sa5d4isv3ni6bdq1i2yskycq357272flj2wbravy4zi7xrsk7iw"; depends=[Biobase]; }; - dsQTL = derive2 { name="dsQTL"; version="0.26.0"; sha256="1pkwppfkfacf8xxmdflckql8x2n6abvfdvwly1va69288ibxy1xf"; depends=[Biobase GGBase SummarizedExperiment]; }; - dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.28.0"; sha256="1l8628150dic4l48r8gqasxpil6552d3h9imysvznkq13j5j48wa"; depends=[GEOquery marray]; }; - ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.28.0"; sha256="14wwfbpdcd6ghv57hv5rfci9y3sgk0lvl2w9flss625bz50bil6c"; depends=[affy ecolicdf]; }; - estrogen = derive2 { name="estrogen"; version="1.34.0"; sha256="1iqzw2ldmg4hqlwf94b8jczj83mix2znp6widjkfq5509wygq2dh"; depends=[]; }; - etec16s = derive2 { name="etec16s"; version="1.16.0"; sha256="0b714kg0chq2kf7x16j6kaaqfmr5lka030dx2k0r8fr6318h5h3i"; depends=[Biobase metagenomeSeq]; }; - faahKO = derive2 { name="faahKO"; version="1.28.0"; sha256="180viida7hd5xqm7h1n0chcpmpd8d5rjrkbjqpk2m2dzsqip9v36"; depends=[xcms]; }; - fabiaData = derive2 { name="fabiaData"; version="1.26.0"; sha256="13ips2phn9r1y3c4lqcpcrwkh37b9b4rpikmnyyafcvs30283vad"; depends=[Biobase]; }; - facsDorit = derive2 { name="facsDorit"; version="1.30.0"; sha256="1s46wk9rzzn89qvi4bz9ayb5swysg1y9rnwyqrfirq3s8wlx6bqv"; depends=[prada]; }; - ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.26.0"; sha256="03sxg8vhvqq96hljv115ngz4arbnjkgz7z1fgzzqckv98v699ah3"; depends=[lumi]; }; - fibroEset = derive2 { name="fibroEset"; version="1.30.0"; sha256="0v0d0v31yrsakln1kq72c1imlyh3hvi6y76qr1v2bsxn607kjab2"; depends=[Biobase]; }; - fission = derive2 { name="fission"; version="1.8.0"; sha256="0f20h8bx9gsz93lzfk18558r7nrdk0kakjv7kc2imz2g9sk97wki"; depends=[SummarizedExperiment]; }; - flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.24.0"; sha256="1n4aix1s0aq8va0b22s4crhj0v7gv4yw42qfq51sk3r4ym05nixp"; depends=[flowCore]; }; - flowPloidyData = derive2 { name="flowPloidyData"; version="1.14.0"; sha256="1rqa38p3gwackzac2zjligbckplnqm6vrva0qny68c33kzpkrlay"; depends=[]; }; - flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="3.0.0"; sha256="0nwbscj298jdnv8wn8863jpj3hps1p2ndfxr5h4dgsjn0bn4cfm1"; depends=[]; }; - frmaExampleData = derive2 { name="frmaExampleData"; version="1.24.0"; sha256="12yfl9qx9n59skfavzlbdfxd1xjwlwf1q3ssbj6fs0c0dvfpfwhn"; depends=[]; }; - furrowSeg = derive2 { name="furrowSeg"; version="1.16.0"; sha256="02y8npnh9b5dbykivhvncd50kq0wvca04jljqynlby1qdvd3ywxj"; depends=[abind dplyr EBImage locfit tiff]; }; - gageData = derive2 { name="gageData"; version="2.26.0"; sha256="13l6hb7a0aqvdgd3lxq8zslw1srgvk9xkyf0r8qc4jygyrk1hcsv"; depends=[]; }; - gaschYHS = derive2 { name="gaschYHS"; version="1.26.0"; sha256="05zc0iddwzbzai29mhp0gh8an30dz9yb24p0kgi1f9ma05w2qvbm"; depends=[Biobase]; }; - gatingMLData = derive2 { name="gatingMLData"; version="2.28.0"; sha256="0bbyn9sx51hnsklyqy6p3x0wsaj05pgsmaqfnskadg4gmisds0v9"; depends=[]; }; - gcspikelite = derive2 { name="gcspikelite"; version="1.26.0"; sha256="11bfn34l8fw0jsl9vy2cvv9nk5ha6ribwksr0lqmiv3k78x4vnlq"; depends=[]; }; - geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.24.0"; sha256="19d85x6wqwrbh3hv61qynxy0g7n9y07jr127n9h3rjhh49h0i10k"; depends=[GenomicFeatures rtracklayer]; }; - genomationData = derive2 { name="genomationData"; version="1.20.0"; sha256="109z4sd82w0r5ncw46y4s53r9m666pc55ih79sifglbr3c8g6gp4"; depends=[]; }; - geuvPack = derive2 { name="geuvPack"; version="1.20.0"; sha256="194r713sd5bhkbn3wfqfzh8a65q13b9jphgn8yxylnpk7vhqfiki"; depends=[SummarizedExperiment]; }; - geuvStore2 = derive2 { name="geuvStore2"; version="1.18.0"; sha256="0m6jsgh2jd926v5q436affk3bb4smxmagpa23aghzlm997vz936h"; depends=[BatchJobs GenomicRanges gQTLBase]; }; - golubEsets = derive2 { name="golubEsets"; version="1.30.0"; sha256="1xqi93b0hvmm9hfmwfzhgjz8sixs6zgb6ii1pv50892r804644d1"; depends=[Biobase]; }; - gpaExample = derive2 { name="gpaExample"; version="1.0.0"; sha256="1cgp4a02rq8afijg8gib628vvvcj9285f9x6ww1njrggs4x8s0i6"; depends=[]; }; - grndata = derive2 { name="grndata"; version="1.20.0"; sha256="1lk8pbqsgqpa2fxdz0inihifi5g8cgbziqclkghj4f0c0f8nv5rz"; depends=[]; }; - gskb = derive2 { name="gskb"; version="1.20.0"; sha256="1awjyghsxsdjhnb14dx8wk7j4lggqlpbvm9gsdk7jr16kjfj0wi0"; depends=[]; }; - h5vcData = derive2 { name="h5vcData"; version="2.8.0"; sha256="18bp4gydmlikbkjbyzj3kcqbb6srajlxfdzx0z50lvjgfy8ix18d"; depends=[]; }; - hapmap100khind = derive2 { name="hapmap100khind"; version="1.30.0"; sha256="0lmz6a10m4bszj0phihkq0m90agvvvlvan40ay2awig060dl0cip"; depends=[]; }; - hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.30.0"; sha256="0wqv1x4ip2d93r1wl420vpc034xk2qn7fksgk8mbq2lfzbnc48gm"; depends=[]; }; - hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.30.0"; sha256="01pddayc866c9mw7mb74nihym1cq4dgiz86liw2i3qk9n9yilv7f"; depends=[]; }; - hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.30.0"; sha256="05qbicnp3p36gi8dpjmvv71xv7cf7zf6avkg5mw9y8cfd9bqmng0"; depends=[]; }; - hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.30.0"; sha256="0q84yxfvspqnk3ak8fxpa7ibld1bmyg7vp8gdrwdjdp6f1xkmk83"; depends=[]; }; - hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.30.0"; sha256="0y5y1g4j434q9dl0893sm80z15rphhda1x1dxywi9z9y689y19dh"; depends=[]; }; - harbChIP = derive2 { name="harbChIP"; version="1.26.0"; sha256="1hqh721di5fxzhpj9a0iljzprzxlyg76z6pxgyfslmc7bccxmld7"; depends=[Biobase Biostrings IRanges]; }; - healthyFlowData = derive2 { name="healthyFlowData"; version="1.26.0"; sha256="1w7w36phhplm5qvm0s1mb7hzgw2yb5bhpkj8mdkwj623763nqxwx"; depends=[flowCore]; }; - hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.26.0"; sha256="0kvki0fz5nmwf729mx4r7a94cmg0s14qndp20z19mpcxrdp2whqs"; depends=[]; }; - hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.8.0"; sha256="174vl57gciqc4awpbkkma0dx4cv7i5cy6g18403yz5sci8xp2qyv"; depends=[Biobase]; }; - hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.26.0"; sha256="0diy6ljvhb0mwfhj3dphk868pxz7s33mq6mwjylayh4imhpakxrz"; depends=[]; }; - hgu2beta7 = derive2 { name="hgu2beta7"; version="1.28.0"; sha256="0f4kd2zmy1apxl8b7axjkcwc5l8x0nf9d5c688cszlnxlh8np4gb"; depends=[]; }; - hmyriB36 = derive2 { name="hmyriB36"; version="1.24.0"; sha256="1gh0jhnlljnbzsqrvz4ssrbsv572fivwkg78dkiqrbrx9vjab6g7"; depends=[Biobase GGBase]; }; - humanStemCell = derive2 { name="humanStemCell"; version="0.28.0"; sha256="0fsa92p8z8df3db8chpld22c9yn78cwdn72n47fy5l51caw0v6z9"; depends=[Biobase hgu133plus2_db]; }; - kidpack = derive2 { name="kidpack"; version="1.30.0"; sha256="0kpa3q9plvskynlww6fnk6mv34z5p900wgx8hxkgdknxmx5ihswn"; depends=[Biobase]; }; - leeBamViews = derive2 { name="leeBamViews"; version="1.24.0"; sha256="0l6cyf4a1b93pqlhlvi98yhdjby4rfcmdxvrrn8fpy5w8mjwmv4x"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; - leukemiasEset = derive2 { name="leukemiasEset"; version="1.24.0"; sha256="05jw1l8bky88hc2gkrs032a51p07kfcwplfw2s4qn14qm90cq680"; depends=[Biobase]; }; - lumiBarnes = derive2 { name="lumiBarnes"; version="1.28.0"; sha256="1k17yy1hy0x5v8ywv4w6vd1kzx0z9mcn0c26sk2qzzmcr2hnx7xj"; depends=[Biobase lumi]; }; - lungExpression = derive2 { name="lungExpression"; version="0.26.0"; sha256="0ryidn0kyxj5ms3yzhln9jizx3vpmxb1x60hr11v3435pw1ihra1"; depends=[Biobase]; }; - lydata = derive2 { name="lydata"; version="1.14.0"; sha256="1hcgkvgbs6rmj1a874hs4j3wdq9gc4pmfg4i6fhik4ykjv5r583j"; depends=[]; }; - mAPKLData = derive2 { name="mAPKLData"; version="1.20.0"; sha256="1psg6jsvlkna1dc5pjzkzy4g3cvxxl0fwzgpbfmhd4wjms4v42xa"; depends=[]; }; - mCSEAdata = derive2 { name="mCSEAdata"; version="1.8.0"; sha256="1yspzyl3cg4i6x42vi9bk0cb74sxcb001pvm3hl3kcz52pqbabdm"; depends=[]; }; - macrophage = derive2 { name="macrophage"; version="1.4.0"; sha256="0q9k2xbp7g1cixain59p244afnhia5ps52fdsnsyc6ca380vhrks"; depends=[]; }; - mammaPrintData = derive2 { name="mammaPrintData"; version="1.24.0"; sha256="1k2v131sqnglffp9w1s76g4i246xghw59l6rbgzq0k6ala58dyzi"; depends=[]; }; - maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.32.0"; sha256="01015f7f1fa56pfy78c9zjxszc379rsqjxkbhwx6bzr1d0pvfq0c"; depends=[]; }; - mcsurvdata = derive2 { name="mcsurvdata"; version="1.6.0"; sha256="04c7z4nal5brgjc3ap3ycgyfws6saxkxdzid2rqzb1h13zk42ahb"; depends=[AnnotationHub Biobase ExperimentHub]; }; - metaMSdata = derive2 { name="metaMSdata"; version="1.24.0"; sha256="0ha2sl75xk8xf3d6cw5hdiqad0ymiva3maq0cn3c5mgv083dj6xr"; depends=[]; }; - methyvimData = derive2 { name="methyvimData"; version="1.10.0"; sha256="0jxpahqxsbnk3spmc4nm31kxxyvai62mlh2ihfkfcslmrccf1k5a"; depends=[minfi]; }; - miRNATarget = derive2 { name="miRNATarget"; version="1.26.0"; sha256="12bp0s6djpp262l1vlyg9sn01yzydz7b0hf183wmnr8568n91dln"; depends=[Biobase]; }; - miRcompData = derive2 { name="miRcompData"; version="1.18.0"; sha256="1jw46vwibiggwdi36a164ib1v04hibrxyxp63qsmqxn38rz7g8fs"; depends=[]; }; - microRNAome = derive2 { name="microRNAome"; version="1.10.0"; sha256="16v2p376v8aawb31ss6mmcf1mip0hyj3740jd6r8w3dvkvjs877p"; depends=[SummarizedExperiment]; }; - minfiData = derive2 { name="minfiData"; version="0.34.0"; sha256="0qcky2k39amjdincb3d29x8xf6sm2vn7643vvkx0jpbfqv5pn9cz"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; - minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.14.0"; sha256="0c7i4830x41wgg0qj3nal6s6am0wnpr3hgyb8i14fip0168xdyfp"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; }; - minionSummaryData = derive2 { name="minionSummaryData"; version="1.18.0"; sha256="01j2wh9bl8v4xm8gsv620f6idrwpycs81kxgq4n4y9padqm12d1a"; depends=[]; }; - mitoODEdata = derive2 { name="mitoODEdata"; version="1.24.1"; sha256="1nsf0ydpb9gwsl8907srgscsaicpcvashy9x4akadlblk5f1sm6w"; depends=[]; }; - mosaicsExample = derive2 { name="mosaicsExample"; version="1.26.0"; sha256="094nvpimnz8i6qscbzzx63zkq3vwh4bahd9wh37jc66m33nx6xna"; depends=[]; }; - mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.26.0"; sha256="1ni7pz1417a05dzwh51212g8dza828wd2gbvzxjdwamlsadqzq7v"; depends=[]; }; - msPurityData = derive2 { name="msPurityData"; version="1.16.0"; sha256="1vv4cifbr3rc13xrjfb0vbrkrinr2kwci8xcyjzwcbpch849izai"; depends=[]; }; - msd16s = derive2 { name="msd16s"; version="1.8.0"; sha256="0cwyd01mxy4h8irgg7r98b66f2cgnir9yh7zdbplrd4jrm3kdjjk"; depends=[Biobase metagenomeSeq]; }; - msdata = derive2 { name="msdata"; version="0.28.0"; sha256="1grhjfb7bchvm6y9yx7hj9ssj8jsyhgvl1imr8zpx4zmsryvsy8m"; depends=[]; }; - msqc1 = derive2 { name="msqc1"; version="1.16.0"; sha256="0qfyds4wvbw3c7zhwnmq24cx9jxrlsvzh4mnks09md70vliwbiy9"; depends=[lattice]; }; - mtbls2 = derive2 { name="mtbls2"; version="1.18.0"; sha256="0fnz9i66y7y9zksxkjqnrk8p4pq5vdv8bnkpr03imsr4jdbvr882"; depends=[]; }; - muscData = derive2 { name="muscData"; version="1.2.0"; sha256="1w3r42al6nl2hi6dkg8mp9kxpif15nrhap65b3mnlpncf5nd8ck4"; depends=[ExperimentHub SingleCellExperiment]; }; - mvoutData = derive2 { name="mvoutData"; version="1.24.0"; sha256="0kb0kj1cklyc7z0kx4vm8s16sp0xcichdwdadjq9r8yckxwy9qfv"; depends=[affy Biobase lumi]; }; - nanotubes = derive2 { name="nanotubes"; version="1.4.0"; sha256="0dyxi22c5mzk97v8rg5mlwi9ikcd2x178s5phzkpnbzd0sl3n0yf"; depends=[]; }; - netDx_examples = derive2 { name="netDx.examples"; version="0.99.3"; sha256="0m9wq6a0i0rjx5jchkgbpl6aypsvcnzl7mnqqzvqzk7p1jf3gc0f"; depends=[]; }; - oct4 = derive2 { name="oct4"; version="1.4.0"; sha256="1xy1gv42b8z3bbghzakfr4y6kqccy3n7x8r0b6r9nznji1qx5n4h"; depends=[]; }; - optimalFlowData = derive2 { name="optimalFlowData"; version="1.0.0"; sha256="0akka98nq5jk16k9472lnwjj6bgygng71x2l29ihykzn1ml9wyrp"; depends=[]; }; - pRolocdata = derive2 { name="pRolocdata"; version="1.26.0"; sha256="16w75i2bj4qjidzxx1gnlsxc68iv4kp3sj61c1r1lli4dzbcss7z"; depends=[Biobase MSnbase]; }; - parathyroidSE = derive2 { name="parathyroidSE"; version="1.26.0"; sha256="1bd6cmpfsk4216drziflki4i3ys7jl2bb0jbsc4727zawxa9xqh8"; depends=[SummarizedExperiment]; }; - pasilla = derive2 { name="pasilla"; version="1.16.0"; sha256="08limpq4hjri0d7s7sb0m4zhla4gaswmk0hmrnpq0i3bpdw3cp5c"; depends=[]; }; - pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.26.0"; sha256="1rb67ba9lhavmg4ffc5vy37fl7a47c8zq0y9h3ra7wx10hgrwxgs"; depends=[]; }; - pathprintGEOData = derive2 { name="pathprintGEOData"; version="1.18.0"; sha256="07zahrfaw6jdb5yc33pj07shc1x5ddvszxvd9228iizhjcy0sp2m"; depends=[]; }; - pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.24.0"; sha256="1vgxwfwrx8ar32r9axbvs22vvswq0hx1xmxg4y03i4l49jjam0id"; depends=[]; }; - pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.24.0"; sha256="0vvrs29v8vgiph6dp0zwny9z1wyak34pafmnmcsilki9nv62amrp"; depends=[]; }; - pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.24.0"; sha256="1mqykfd8xkd254pa18n94z2ypk1rvh4g7sx54igz0kv7d0hc2rca"; depends=[]; }; - pcxnData = derive2 { name="pcxnData"; version="2.10.0"; sha256="0dsagapcrad7k5ar48rg43vslxvrw1rwlfz135sgqvy81c97df1f"; depends=[]; }; - pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.26.0"; sha256="1hd8qy82ks584z504m8r3gq4dxi19k8qw1d8vlfd8k6iis6wa82f"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pepDat = derive2 { name="pepDat"; version="1.8.0"; sha256="1fmrgma2xl2v6g3nda6kiizgw6lxfh0bi9vfqyarg08mj2m7yipy"; depends=[GenomicRanges]; }; - plasFIA = derive2 { name="plasFIA"; version="1.16.0"; sha256="0bnwappr5n0db0595swl4f35cd31j3a2kzp1xmyddxm3xwr364ps"; depends=[proFIA]; }; - ppiData = derive2 { name="ppiData"; version="0.26.0"; sha256="13ks4rpm25bnbhqyfqqw27af6px0jwr2mn16fid3j4lg7dr5c0qs"; depends=[AnnotationDbi graph]; }; - prebsdata = derive2 { name="prebsdata"; version="1.24.0"; sha256="0i7szry1chh8x7p1xynnzc9m917z7p0w031a6b5f6ffcih6p3g8s"; depends=[]; }; - prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.16.0"; sha256="0mw6hna1avp7ihbyw75z157g7ssxwbigglhvcx52aj37bnlw82r2"; depends=[Biobase]; }; - prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.16.0"; sha256="1kv8a53gkibr320xq5h26v7ilw5pjqcrsp2h18wqaw0cyi3s0wn8"; depends=[Biobase]; }; - prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.16.0"; sha256="10cbzs3azz4hxpxhjaf4mgqpwf3b46b60arm2z2fyf5hgmxvh1ly"; depends=[Biobase]; }; - prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.16.0"; sha256="14axk66vb1kkis27qg8nnq1ssdxxlqazvz574vjxrs31pwlawpiv"; depends=[Biobase]; }; - prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.16.0"; sha256="0cib5p853rz5j3l9x752h62fsyrvv1i61v6nnacrmbzi4k9b1w68"; depends=[Biobase]; }; - pumadata = derive2 { name="pumadata"; version="2.24.0"; sha256="1jal8j50z6lc9qvydnlsklvghp2zc24zk3g2lbsn0k1ahrsxhx3q"; depends=[Biobase oligo puma]; }; - pwrEWAS_data = derive2 { name="pwrEWAS.data"; version="1.2.0"; sha256="02aq2sqilz11sknbwkdfca7gw95i4x5mf2n477kzn09dhiplq1l9"; depends=[ExperimentHub]; }; - qPLEXdata = derive2 { name="qPLEXdata"; version="1.6.0"; sha256="16jzij7cmiagxb0cp2pyna8s424kx3gz55b6v2qsssm9apy77bg3"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; }; - rRDPData = derive2 { name="rRDPData"; version="1.8.0"; sha256="09n5289fk5mq1q9skfzmg4rxq66l68k5rv72pz256p7k5xslxx2y"; depends=[rRDP]; }; - rcellminerData = derive2 { name="rcellminerData"; version="2.10.2"; sha256="0w8hyfyk1sqlz0kicxazn60rl6zxi36c2g6yrdnxfdm3sfjvws1d"; depends=[Biobase]; }; - restfulSEData = derive2 { name="restfulSEData"; version="1.10.0"; sha256="0l4qamp6x2g5k2bix0mlxpv344yqzz3ap80zdw4b2jgdlq9gvfgg"; depends=[ExperimentHub SummarizedExperiment]; }; - rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.26.0"; sha256="1bsv8i3xapkpga04388598slqqjwpkh9nh3vy9q4ibj14wnmcf0w"; depends=[]; }; - sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.12.0"; sha256="1v5qi6fh86snfpw4q0lqi0sznfdqv5d95a07bsdqf3g4p6saalxd"; depends=[SummarizedExperiment]; }; - scRNAseq = derive2 { name="scRNAseq"; version="2.2.0"; sha256="0hcxwaf0y7in611bnl1lawnklwy6f71g6p8ci7s7s1anzm421dqx"; depends=[BiocGenerics ExperimentHub GenomicRanges S4Vectors SingleCellExperiment SummarizedExperiment]; }; - scTHI_data = derive2 { name="scTHI.data"; version="1.0.0"; sha256="0wpjlyipp9d50k0mrvmgffcwxc7k3fai736scvch0pa0g6kk2pg0"; depends=[]; }; - seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.20.0"; sha256="12sqw6wi65g33can65blcdb0wf8qn91p49sxyiprq9wa5bbkmk2b"; depends=[]; }; - seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.24.0"; sha256="1y16cfrrfsn30fp4vxmlk348zlrq5m2k6kidi00gayd49l0q99g7"; depends=[]; }; - seqc = derive2 { name="seqc"; version="1.22.0"; sha256="0b9aqj9mxkxdbgrc0i010nizpl6gvna2dla817135z7zzdqic8lw"; depends=[Biobase]; }; - serumStimulation = derive2 { name="serumStimulation"; version="1.24.0"; sha256="0qx21q874k6vg8i7kwhajlhvrb6z4xlmrzrs0asd180f2vx2g2w2"; depends=[]; }; - sesameData = derive2 { name="sesameData"; version="1.6.0"; sha256="0fyiwd2sfqdyb1msm4clz8lwbxlw4dfl83kkj25xmp5hh2dh915a"; depends=[AnnotationHub curl ExperimentHub]; }; - seventyGeneData = derive2 { name="seventyGeneData"; version="1.24.0"; sha256="1rla88mcnpl0w3k0szbhzzkbc786fq67vqyqwv2aq9f4nssjw95k"; depends=[]; }; - shinyMethylData = derive2 { name="shinyMethylData"; version="1.8.0"; sha256="19wfry1xx7kvl5mrmn4pv4amlv035nl73ni58qa6s5kwxzklpavn"; depends=[]; }; - signatureSearchData = derive2 { name="signatureSearchData"; version="1.2.2"; sha256="0fm3zy3z1p8f7li14ic2za219pav1sslsxkxd8yprlbi20ab7rx9"; depends=[affy Biobase dplyr ExperimentHub limma magrittr R_utils rhdf5 signatureSearch]; }; - simpIntLists = derive2 { name="simpIntLists"; version="1.24.0"; sha256="1sxscydcd43xlyxr4rn3rmjc9hmwvqzrqw40ihmkva0ld8r635n1"; depends=[]; }; - spatialLIBD = derive2 { name="spatialLIBD"; version="1.0.0"; sha256="0yx12mcrmb2g6sjnk1ajclnc0z3i2aps2snw85gyanaad5l1igq5"; depends=[AnnotationHub benchmarkme cowplot DT ExperimentHub fields ggplot2 golem IRanges plotly png Polychrome RColorBrewer S4Vectors scater sessioninfo shiny shinyWidgets SingleCellExperiment SummarizedExperiment viridisLite]; }; - spqnData = derive2 { name="spqnData"; version="1.0.0"; sha256="19sisn5l3nvz2nr400jgz5clcj0iygk17xhpsjqgswi9p43a3k9z"; depends=[SummarizedExperiment]; }; - stemHypoxia = derive2 { name="stemHypoxia"; version="1.24.0"; sha256="03kzrmdlixi31k6jfjhcn4dkm5g16rbd315ws4pqilpdwhgmrlff"; depends=[]; }; - stjudem = derive2 { name="stjudem"; version="1.28.0"; sha256="07cbpxzc78asjm41rx5nl4gyzczp7j293ih86ins31r65grwjwm3"; depends=[]; }; - synapterdata = derive2 { name="synapterdata"; version="1.26.0"; sha256="0a1k831pw0sl0blr1iy5is0s06sw4kadb30prd0h2l2z8s6ldarm"; depends=[synapter]; }; - systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.16.2"; sha256="0iamb2hp4dlib85jmzr77xm02ykriyzbh1ikqx9gs0hy15bribyv"; depends=[BiocGenerics devtools]; }; - tartare = derive2 { name="tartare"; version="1.2.0"; sha256="0v4s0xbxqrv8syihn1ahcrak8gsyklxl3xnzfy4dmqz6bzarpcgd"; depends=[AnnotationHub ExperimentHub]; }; - tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="1.6.0"; sha256="06f4xi2lh8idv7h5hmrmlha71k0dxc4s07apc2lj27l2wpm5dp85"; depends=[bsseq ExperimentHub knitr]; }; - tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.26.0"; sha256="04f3wy2k884vxyij1yrivxb6jymkh2j7byh0qzmkq2gs9k2lbrka"; depends=[]; }; - tinesath1probe = derive2 { name="tinesath1probe"; version="1.26.0"; sha256="05rbyhcqp5czcnhz6rw6jii212ggpixgclik5bq0j8418mgvq4rs"; depends=[AnnotationDbi]; }; - tissueTreg = derive2 { name="tissueTreg"; version="1.8.0"; sha256="1qgn9c14hy6n79rdyzhj1baqf3wkmmc8nwdfg2aw65ccf3fr8mkb"; depends=[]; }; - tofsimsData = derive2 { name="tofsimsData"; version="1.16.0"; sha256="0wi2963il55fjmcs5r6bwhi73h96dv3j706fq42x2z9053y5vn92"; depends=[]; }; - topdownrdata = derive2 { name="topdownrdata"; version="1.10.0"; sha256="0afjn3jawalnrfd0aqa2lm56q4j5c42ah2lfrb7k6bl0a731x0yn"; depends=[topdownr]; }; - tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.26.0"; sha256="1iszm7cqx30d1nnl1l7xlqvn18kvgb6q4d1cspjnd1l8x2cf6h3d"; depends=[Biobase]; }; - tximportData = derive2 { name="tximportData"; version="1.16.0"; sha256="0vscg9qz6hf20sbaghsza1gkcch4vm0h93wwxhmsm9vnb0j9y06n"; depends=[]; }; - vulcandata = derive2 { name="vulcandata"; version="1.10.0"; sha256="1zah7palpk8b0r9nfivcf5w2sjvr27vgvazswbcs53shm056ry75"; depends=[]; }; - waveTilingData = derive2 { name="waveTilingData"; version="1.24.0"; sha256="0vx702xi32a4735pygya406wqk7ypn363mp3agb1cby0bh6p72qk"; depends=[]; }; - yeastCC = derive2 { name="yeastCC"; version="1.28.0"; sha256="1sfw59kv88mp1wf9rrib477xf9krw0crs3sikg8zpki1c2v06ihm"; depends=[Biobase]; }; - yeastExpData = derive2 { name="yeastExpData"; version="0.34.0"; sha256="00bf71za2m03njy3a0sh78x1b690nh07z6g52s52hgv35fihapk7"; depends=[graph]; }; - yeastGSData = derive2 { name="yeastGSData"; version="0.26.0"; sha256="109zl3n5cs2dmdwkgh34sqsghb6kywpg4mgr7qqf0iaisdcydix1"; depends=[]; }; - yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.24.0"; sha256="0066r4hk0fgidg0q09fq4lldkm2d889z7xjg0zlfmnhnn7jv68hf"; depends=[]; }; - yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.26.0"; sha256="0pvkrgwca7aqk833jp0d0dnz1kjhzl7zabbkaszqb659aq985z8m"; depends=[]; }; - yri1kgv = derive2 { name="yri1kgv"; version="0.30.0"; sha256="1bhw9gnr8291gyrg8bak2nzzgqgfgxvxwlcjd3v8w0a87qjrlsih"; depends=[Biobase GGBase]; }; - yriMulti = derive2 { name="yriMulti"; version="0.18.0"; sha256="049armafqigkw7b8yfi9lfy2wggib0sx42w0bi9qaq4f9lhdf6ia"; depends=[dsQTL GenomeInfoDb GenomicFiles GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment VariantAnnotation]; }; - zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.8.0"; sha256="0bz043yz0v78z7lildrcap9gwlqp550yclbax3lmydmkimic3hgq"; depends=[]; }; + ABAData = derive2 { name="ABAData"; version="1.20.0"; sha256="1mclg6rgdagrvk76zcqi53b0a5wr8nbwwrmagsji2ncv1zq2mzxj"; depends=[]; }; + ALL = derive2 { name="ALL"; version="1.32.0"; sha256="1i96kvk9s99h3a2xmkhhc6qcjp5l63jd5fhj6jv8yxzxbxq83fwq"; depends=[Biobase]; }; + ALLMLL = derive2 { name="ALLMLL"; version="1.30.0"; sha256="0bs393hfn4zi4ysc1lyjpwp8p1g0gbzsq81rl8g9xf5kxg4b06pw"; depends=[affy]; }; + ARRmData = derive2 { name="ARRmData"; version="1.26.0"; sha256="0wpxl3xjncpyj5x7k5sabr8bmgd85j743pk1j8cqwyb0i6nlkkgj"; depends=[]; }; + ASICSdata = derive2 { name="ASICSdata"; version="1.10.0"; sha256="1kmr3b5hr18fjmissbzd2wlcwwdvyhdzjq5lhz0jq77p83qfx00x"; depends=[]; }; + Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.26.0"; sha256="0rqg698b4kw0g2plspvg1pjkjdckj0b2cvwni6ax97g287z93hf5"; depends=[]; }; + Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.24.0"; sha256="1ww8q5bbwi605wmiwvhz9fd780f2v48rzk3x0raa9bi9d0xzq8xs"; depends=[]; }; + Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.28.0"; sha256="0b4f5nprvch8jczd1yrl1n7jsdd2x9ww8jd9p4qiyqyg62qnknc1"; depends=[]; }; + AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.28.0"; sha256="0czwpiawgxyc8szpc1siik2rysxfmb8ir6byf6wsdq7cqa4gm78y"; depends=[]; }; + Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.28.0"; sha256="16bqcw986q854gzg5mhkbgwbl6rw237i2b28jsc0skh7jnc2751f"; depends=[]; }; + AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.30.0"; sha256="0d7y12s8ajy1qdch0d6nb053ja5dhb3l4509qgy5baxy7v09pg08"; depends=[affy]; }; + AneuFinderData = derive2 { name="AneuFinderData"; version="1.18.0"; sha256="02vb3kmza5hv8bc424fdmfif608xvpdb759w8882kac8izpv29ks"; depends=[]; }; + AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.20.0"; sha256="0qpib69wj91n7h56hrfl2vakp9sjw92s4a7q9y1xfia3hqyfdvkj"; depends=[]; }; + AssessORFData = derive2 { name="AssessORFData"; version="1.8.0"; sha256="05fb1h4wpnncz93ypzazxkwmlvqsr399b6vnz98g11c8x4m25gx4"; depends=[DECIPHER]; }; + BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.28.0"; sha256="0z6d0q1qhx3hl1ycgsvd2va2p9rmh9w74rwf851yfcvnfbln3gsy"; depends=[beadarray GEOquery limma]; }; + BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.10.0"; sha256="16fkz7gd1pbc7lmbgwxcjdqs64jllqx1vdpkkhcglk027xvwqlf2"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; }; + CCl4 = derive2 { name="CCl4"; version="1.28.0"; sha256="0zyhfqhj29g1w2l9n7wzr99jxh70p0pj5q7j2akdh5mnprzpq139"; depends=[Biobase limma]; }; + CLL = derive2 { name="CLL"; version="1.30.0"; sha256="1ys1mvbhvvqdrp26sd7kd45ffz5jrm84wp3250kcb4s7q9s933m5"; depends=[affy Biobase]; }; + CLLmethylation = derive2 { name="CLLmethylation"; version="1.10.0"; sha256="0xckg0xmbw5k6chf1g5m9hq9iy378fnr5hxcfg558i7q7i3c26nk"; depends=[ExperimentHub SummarizedExperiment]; }; + COHCAPanno = derive2 { name="COHCAPanno"; version="1.26.0"; sha256="0j7rfk7szxhns1q4nccgs9ca5s5h9xbw5fqkz6zyxqpm427hsvrm"; depends=[]; }; + CONFESSdata = derive2 { name="CONFESSdata"; version="1.18.0"; sha256="1hf55gq2y284pna7dvp81713miqjpf5zc9wg3sw0ayw88sfp5h69"; depends=[]; }; + COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.26.0"; sha256="1993nbdkwwz7a52qpsmzq53x59xwcdbfw8c9qajkwsn61shxg0m0"; depends=[]; }; + COSMIC_67 = derive2 { name="COSMIC.67"; version="1.26.0"; sha256="1wpvf9iynk22phpbh9bhk8iyv2sbmz9742ym6vsm3z26f4rdf5k2"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; + CRCL18 = derive2 { name="CRCL18"; version="1.10.0"; sha256="0i1aic3zx7cjxz2as6fq4qblizjn8a04i5r5s16z0nkbm5n7nnhr"; depends=[Biobase]; }; + CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.22.0"; sha256="0lzpq5ga9l8r28g3f54n22ajqzq158f3vddimirbdd06jm3wb1c5"; depends=[Cardinal]; }; + CellMapperData = derive2 { name="CellMapperData"; version="1.16.0"; sha256="09nccxikyqzmbmfl27d1lf8salarx83wgg4w7agacyn666q2zqww"; depends=[CellMapper ExperimentHub]; }; + ChAMPdata = derive2 { name="ChAMPdata"; version="2.22.0"; sha256="04dybk5fp3jxwpwvasqrjfdfi4hi8cy6d1hdkmr1iy8r19nksq2d"; depends=[BiocGenerics GenomicRanges]; }; + ChIC_data = derive2 { name="ChIC.data"; version="1.10.0"; sha256="1lapcczii3y06k85bbg119fpwfzwpx1vm6kza13shr2ssj0kgrrq"; depends=[caret]; }; + ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.28.0"; sha256="0x8v2l15shhd16w42b31458d581qnlnr4n726fr6pbrr8z830zn0"; depends=[bigmemory]; }; + ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.14.0"; sha256="1g2nl3a9cffvvz3xfpp6sn0ppprkpcd9pzz94jf70x70v0973hrl"; depends=[]; }; + ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.28.0"; sha256="1j9m614739vrc4gflc23pz339g1vvx5lywxq14mcb8m9mb1dskgl"; depends=[affy hexbin limma qvalue statmod]; }; + CluMSIDdata = derive2 { name="CluMSIDdata"; version="1.6.0"; sha256="15n1173vkicw6l64wb1qgn7x24mp1a0vlgmb7ni2496dfs34dd64"; depends=[]; }; + ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.26.0"; sha256="07dbdmavgs5g53ig71c04pprx66cazqvc40w8r4bzrhdw50jp0ly"; depends=[]; }; + CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="1.8.0"; sha256="1nwhmx9ccczz3z1h7hr4adrfxhighmk79nm60n0shx1slngvimy0"; depends=[ExperimentHub Rdpack]; }; + CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.22.0"; sha256="16xylk6izj57vlk8hij3qgw43mnfzcf75191a0g6fqj8xgy4n9wj"; depends=[]; }; + DAPARdata = derive2 { name="DAPARdata"; version="1.20.1"; sha256="01q622qpcwqnsynf1hba49l6si7w81qzn4fsy9q00yjm8388lgpi"; depends=[knitr MSnbase]; }; + DLBCL = derive2 { name="DLBCL"; version="1.30.0"; sha256="1srzynbja9rcdnxc43fl1pzv9gdbx4f37krgwlnbp0312pw13g1i"; depends=[Biobase]; }; + DMRcatedata = derive2 { name="DMRcatedata"; version="2.8.2"; sha256="0jwzbsl50agn0cyhg0fs292qvsn18v560ihcyq3lxg1jkv33w0k8"; depends=[ExperimentHub GenomicFeatures Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 plyr readxl rtracklayer]; }; + DREAM4 = derive2 { name="DREAM4"; version="1.26.0"; sha256="058f20ny3z951b4f0i99hwxxmrnkci1gimj03ngx72lidj6rc865"; depends=[SummarizedExperiment]; }; + DeSousa2013 = derive2 { name="DeSousa2013"; version="1.26.0"; sha256="0r6jn5qgx904dkw7ps4ml30z7w21kal9cja5andgmg12g6wivjf0"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; + DmelSGI = derive2 { name="DmelSGI"; version="1.22.1"; sha256="0r1jcsra199fn5z3hcgqp0abpxxlz3g64j4xljvxz2xqagz26y4f"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; + DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.28.0"; sha256="1xgzdxvk845zd7vcck0016698cwq4w17f61agq86y1kpcy7k0gpv"; depends=[EBImage]; }; + DropletTestFiles = derive2 { name="DropletTestFiles"; version="1.0.0"; sha256="1s861xidadihxd0pdzibqnisazyliwdaqab0aszk035h6ixwcpa1"; depends=[AnnotationHub ExperimentHub S4Vectors]; }; + DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.26.0"; sha256="1z5p79595w6cf9rqangziz4q3c57shn67w5agf0x1d14acwswzzs"; depends=[]; }; + DuoClustering2018 = derive2 { name="DuoClustering2018"; version="1.8.0"; sha256="1hp3n6m9ld4sq7jsscpdz7i2cfjp4jqyx6w0lr9y1di6zilgvxfi"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; }; + DvDdata = derive2 { name="DvDdata"; version="1.26.0"; sha256="1kf0dzwy22b28p44xmn59rnpk2zslz8yi7xghsbkqmc5nxkwgxf3"; depends=[]; }; + EGSEAdata = derive2 { name="EGSEAdata"; version="1.18.0"; sha256="1lma9xpqf4gghh89d43mbnssfqd062rimy5jdyskiaq2xw3xdpm8"; depends=[]; }; + ELMER_data = derive2 { name="ELMER.data"; version="2.14.0"; sha256="1r9gikga3ywq2w20r2nfcbjz45f2yl8fqvrb1hpn0yzram290b0b"; depends=[GenomicRanges]; }; + EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.28.0"; sha256="1fybmg8cyvxhz1c22xx217ifcdpbjybbghsg18gsap6s7gf5y5f4"; depends=[GenomicRanges rtracklayer ShortRead]; }; + FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.26.0"; sha256="1byq28015k20bygs0dv4zngf0rzzbskxgv2ykjq977av1a8gsn64"; depends=[]; }; + FIs = derive2 { name="FIs"; version="1.18.0"; sha256="19c921fky1slfqrqial0hz9r73l0m31xa2h2m19h6c17skk68rxc"; depends=[]; }; + FieldEffectCrc = derive2 { name="FieldEffectCrc"; version="1.0.0"; sha256="1r3zx27ymr7r8k7sizp4y1q33fsqpik837635jhal9cfi4rkl3kq"; depends=[AnnotationHub BiocStyle DESeq2 ExperimentHub RUnit SummarizedExperiment]; }; + Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.26.0"; sha256="1khw2xd3v4g7piq3ds1g9539p40jzw3p7z6hvmy986s4njvfvhnp"; depends=[Biobase gplots limma VennDiagram]; }; + Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.26.0"; sha256="1qqqi9zi8rc4mnkvgmlh582wjm6mwbkkiy6475asl0v6v8sf1m7a"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; + FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.28.0"; sha256="16nwb63src82whwfazsljd7cp0f5d1afpgsaw6ljnqaaz7palyv2"; depends=[minfi]; }; + FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="1.8.0"; sha256="0b3hzjak4fmd2v4i7vv5lrvhixd3i9iwns5vvqnxikwlcfw3d1m9"; depends=[ExperimentHub genefilter IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi nlme quadprog S4Vectors SummarizedExperiment]; }; + FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.18.0"; sha256="05x7q7yf2sn7jb3mf61r3v40dcksxb2kipb7n304sq4nbbn3dmb4"; depends=[minfi]; }; + FlowSorted_CordBloodCombined_450k = derive2 { name="FlowSorted.CordBloodCombined.450k"; version="1.6.0"; sha256="1zfm8mdrwafqyp0jk78sq182cdbxasv2kkd3iwpskfdxj4ddmm0y"; depends=[ExperimentHub FlowSorted_Blood_EPIC IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi SummarizedExperiment]; }; + FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.16.0"; sha256="1v9b97cddawzdmby7pdjfgmpppqwafjwdyafpdgx0a7icynjkygs"; depends=[minfi]; }; + FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.26.0"; sha256="07ywjaf62zvx944685jdj5cn414lywi6yg3g856nym3abh8fi0q1"; depends=[minfi]; }; + GGdata = derive2 { name="GGdata"; version="1.28.0"; sha256="0dkimkjzh46dnrz9kx1d0fbw9xl9il9b4vy7qmbrqnc8jiny0f8b"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; + GIGSEAdata = derive2 { name="GIGSEAdata"; version="1.8.0"; sha256="0xn4x01njpmgpm2wyaqak1sa4v4qjksf0lv1jq451ah7nm1snwyk"; depends=[]; }; + GSBenchMark = derive2 { name="GSBenchMark"; version="1.10.0"; sha256="1vc9zd53lmk3nsnwsz7ghizps58qlgxpjqjvbi3m4pafjs2h8rm9"; depends=[]; }; + GSE62944 = derive2 { name="GSE62944"; version="1.18.0"; sha256="1n1ja9wi7r66jgragfj49xq2p0a12bcrdrhv6y1bc21c0rjl632r"; depends=[Biobase GEOquery]; }; + GSVAdata = derive2 { name="GSVAdata"; version="1.26.0"; sha256="0jcyshq96kqzar48y2ajh0lzn546rbkb7xkf5fazixrrbkyfq904"; depends=[Biobase GSEABase hgu95a_db]; }; + GWASdata = derive2 { name="GWASdata"; version="1.28.0"; sha256="1znjqwxpvaxdq4w04cxcpw387mb1x52kn730a99qsy4fj61m0c83"; depends=[GWASTools]; }; + GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.18.0"; sha256="1jgnnlprcz0s0i1v5ar08w0ngfwf73a2l4d59lsbx7bjciwkwaf9"; depends=[]; }; + HCAData = derive2 { name="HCAData"; version="1.6.0"; sha256="1ck373w9l6cyj8f476b4kfmkh8bvqics69wda3vawcbmfr9iial1"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + HD2013SGI = derive2 { name="HD2013SGI"; version="1.30.0"; sha256="0fi7264x4ryqykzjf5ws1azdxdx7aykp5nn570yrwwlqx2hxnl01"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; + HDCytoData = derive2 { name="HDCytoData"; version="1.10.0"; sha256="1vcnwlh3d8krki689fx1j6g21rlk2cbj2j293dy33bqwpizgy047"; depends=[ExperimentHub flowCore SummarizedExperiment]; }; + HEEBOdata = derive2 { name="HEEBOdata"; version="1.28.0"; sha256="1sndqf11yn4ci4zan6f62qcx7lqpaahwx3bivjr90qr1rsyfn7x8"; depends=[]; }; + HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.30.0"; sha256="10863kkmfipg5d1rb35zr48lkfak8kdhxgqy6592ds4hj38q8sl9"; depends=[]; }; + HMP16SData = derive2 { name="HMP16SData"; version="1.10.0"; sha256="0rqnq7vkwm27p5rpvc1594yw2p0ydjxfjd7q0hjk482wl3lnnc74"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors stringr SummarizedExperiment tibble]; }; + HMP2Data = derive2 { name="HMP2Data"; version="1.4.0"; sha256="02x7a07f7v462r4rj58mjifkwgir5q0lxczjnq0wvnxx46qnbnmv"; depends=[AnnotationHub assertthat data_table dplyr ExperimentHub kableExtra knitr magrittr MultiAssayExperiment phyloseq readr S4Vectors SummarizedExperiment]; }; + HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.10.0"; sha256="1173wlbghhjkdwwmv2j6938gncr8kr8kxjkmb7sk926kng7iy80a"; depends=[]; }; + HarmanData = derive2 { name="HarmanData"; version="1.18.0"; sha256="1fvjh65s29mdxksmcv5h82vnapv7fqcdaa9ibwxc50wkzig8vpxs"; depends=[]; }; + HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.12.0"; sha256="053rn3nmcgnqfg955ysvikizg1g1kzn66kg7dn2vnwhgnif9r5pc"; depends=[ExperimentHub]; }; + HelloRangesData = derive2 { name="HelloRangesData"; version="1.16.0"; sha256="128hlf2nixphidbgky3qcmfrb4griiglqz4as7yv0ybn85bx07f2"; depends=[]; }; + HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.10.0"; sha256="0hi2yfsyf298b00992ssxvypafj89gbabn2h4x4i9bq2ddi4rqv5"; depends=[]; }; + HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.26.0"; sha256="0i5mpfw5nynxraa9c2rzk6fw6mhxr5ybxig6g1fxidhdbwy8ry6m"; depends=[]; }; + HighlyReplicatedRNASeq = derive2 { name="HighlyReplicatedRNASeq"; version="1.2.0"; sha256="0j65ip5wfkihpvbr0qyxk7yvdfd23aynqgvnrj8xnmpxihz2diz1"; depends=[ExperimentHub S4Vectors SummarizedExperiment]; }; + Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.26.0"; sha256="1r82bva4w8gkzj021d14ylnf7pd61mh28vhmmcy1c4l6qd00fmqs"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; + HumanAffyData = derive2 { name="HumanAffyData"; version="1.16.0"; sha256="0mbya59yqmq59f9mplgd59v7z7hfjrcp2ki2d8iyn3c7xy0vx368"; depends=[Biobase ExperimentHub]; }; + IHWpaper = derive2 { name="IHWpaper"; version="1.18.0"; sha256="0rlgbfdabw0ixvnw4ahxznln9dmy6j6y2hfpfv2zx1xznawsmng6"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; + ITALICSData = derive2 { name="ITALICSData"; version="2.28.0"; sha256="0rxhv94h735k3ms0zddlawlzafc14gvqcsv9p7ldw0jrfq2dpb88"; depends=[]; }; + Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.26.0"; sha256="1dkdgkql5lfbzwy01kzg1w79axagi7js2gmdaah3qs8gvc0qk3qk"; depends=[]; }; + IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.28.0"; sha256="1i5qz0ryspfnd856p62zn6br6n634xkmz8fxl9fvdfrb7xq8vhsd"; depends=[]; }; + Iyer517 = derive2 { name="Iyer517"; version="1.32.0"; sha256="06ih28b8g03nzp9z0nvni710z84ksarlrpcvywrsfkylzfm4xdil"; depends=[Biobase]; }; + JASPAR2014 = derive2 { name="JASPAR2014"; version="1.26.0"; sha256="05k4x8via56xn7xxc4r669yj575z42faax6alm8nwskxj0jf188c"; depends=[Biostrings]; }; + JASPAR2016 = derive2 { name="JASPAR2016"; version="1.18.0"; sha256="0k3wlj00bbk5hv6f443v362xpd0jf2v51abhbypv6nrlmlmin315"; depends=[]; }; + JctSeqData = derive2 { name="JctSeqData"; version="1.20.0"; sha256="1dz7ac8br6x9mgma922sf6j5689dca1dqylkcqkyvm7m91ivjgij"; depends=[]; }; + KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.10.0"; sha256="1d1dac9yq61fpyi5f7i16shabccl1x5zhbrh11bnzpwkwydx6nzz"; depends=[Biobase BiocGenerics]; }; + KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.28.0"; sha256="1vv3r79f2r7a80ivmqfrfhy2qqjmwibnfy3vdijfpld56wli5ayh"; depends=[Biobase BiocGenerics]; }; + KOdata = derive2 { name="KOdata"; version="1.16.0"; sha256="0y1i3fhhj3mqa813hfslv93iskm4pzbrhb8ld388b6llls80kxa6"; depends=[]; }; + LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.28.0"; sha256="12z1ak7aijdd0xsra2lg8ny57wsx5hvdaj0ph2gq7nkjzmj4clcq"; depends=[IRanges KernSmooth]; }; + ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.22.0"; sha256="0bh4gz1cna4cq26g1820rndiyg40bkbc3wnpl7sgcahqdg06v5wc"; depends=[methylPipe]; }; + LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.26.0"; sha256="1ybccdir9a2p7xvngph2sa408pfdh99s4ssqwm1l1m08vjnj96wc"; depends=[]; }; + LungCancerLines = derive2 { name="LungCancerLines"; version="0.28.0"; sha256="05j9ybc4xs4da6zdc5237ynqrn1dddsr98lplsx9is3nyw40qb54"; depends=[Rsamtools]; }; + M3DExampleData = derive2 { name="M3DExampleData"; version="1.16.0"; sha256="0d07qnhkipwj6psxgl6wmp46jkiv8f20chc9wga405yyqxysk2pr"; depends=[]; }; + MAQCsubset = derive2 { name="MAQCsubset"; version="1.28.0"; sha256="1n7y3663jzrh7g50dp2g5pxgjz7cjjjfwlha3pdpkzgdwv0im59x"; depends=[affy Biobase lumi]; }; + MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.28.0"; sha256="0h409f2g4m8b67b6id3klx615m12cbg5cv5gfilk4gwmv12jravz"; depends=[affy Biobase]; }; + MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.28.0"; sha256="1d35dxh090cqfw5ry3hix7c7x5k9mfs4l069hn7m0d7rjy526y39"; depends=[Biobase lumi]; }; + MEDIPSData = derive2 { name="MEDIPSData"; version="1.26.0"; sha256="0p5glf7rs177729wzibbdmaqz9rpkjmgqa4pzrba3mi6qbqy7q4i"; depends=[]; }; + MEEBOdata = derive2 { name="MEEBOdata"; version="1.28.0"; sha256="1crjy0xiqsgkjs1kz57491fnlx00914sbjljqrf9smxzhn0g3rcx"; depends=[]; }; + MIGSAdata = derive2 { name="MIGSAdata"; version="1.14.0"; sha256="104jfsswi1lh7m8nh25rvn8hdsbbraa4i5p1dg87dzihb88jgzcx"; depends=[]; }; + MMAPPR2data = derive2 { name="MMAPPR2data"; version="1.4.0"; sha256="10r6d641yqcn5aw135252fqxx3z8hjckwfd8ry0brx0pxq5xd20g"; depends=[Rsamtools]; }; + MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.26.0"; sha256="1ajkpgfq0nhi4r7br2qw5v08wwpml2cnm7253m3s8jj2cajxf4fx"; depends=[]; }; + MOFAdata = derive2 { name="MOFAdata"; version="1.6.0"; sha256="0zggk3fq0a7qym61733fy9ks9ybbz6dbkpahzdgv224rxwda4ijh"; depends=[]; }; + MSMB = derive2 { name="MSMB"; version="1.8.0"; sha256="0x8q4ifi684yyylsa5csyz6bzdp82r89a7c5fw5bkgyid9j3k7ba"; depends=[]; }; + MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.12.0"; sha256="137faw7y0118jwyh4inss46gxqh1mmqsk0jk5c3d0gvh8a6jyips"; depends=[]; }; + MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.10.0"; sha256="0h9zar4nrlbfbggq8ficmqmpzp81cwcsbjcya42bl44a1sfh1nnp"; depends=[]; }; + MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.10.1"; sha256="0918dwvybdcbpy73c8wwdiakzwg60q3rblpn6nc05qh3h0pkma7c"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; + MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.10.0"; sha256="04cbv1sikk0y66sjzfvaahspq7ycbyk82bzd8nx1mbcvm8mvmgi0"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; + MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.10.0"; sha256="1ad3rc51zh59r109p09vlbiwwadpbf35cw3lrciyji32rcvzbs50"; depends=[AnnotationHub ExperimentHub impute S4Vectors SummarizedExperiment]; }; + MethylAidData = derive2 { name="MethylAidData"; version="1.22.0"; sha256="0vhnynxq3qvhkjqz3ijwacjy1149hn22hhvvyp9lyhkz8zh2lh92"; depends=[MethylAid]; }; + MethylSeqData = derive2 { name="MethylSeqData"; version="1.0.0"; sha256="0l4nlnascxizm6n7fq7f2ynqlvp01ml64s9fynn153zhar4aa5nd"; depends=[ExperimentHub GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors SummarizedExperiment]; }; + MouseGastrulationData = derive2 { name="MouseGastrulationData"; version="1.4.0"; sha256="0c8vy63ripm2srmz6mac4r24rgcsjvc2qvrm84sll96cn0pxczr5"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment SummarizedExperiment]; }; + NCIgraphData = derive2 { name="NCIgraphData"; version="1.26.0"; sha256="00x01z7rzpx9hapxjj30ijd1l6jjid127y4krsazx58vzkjlv6z4"; depends=[]; }; + NGScopyData = derive2 { name="NGScopyData"; version="1.10.0"; sha256="0lfln12i2m0yz1mdv427kd8rln8zd361r1ndi3bykvfk5j02k89i"; depends=[]; }; + NanoporeRNASeq = derive2 { name="NanoporeRNASeq"; version="1.0.0"; sha256="06r7v0hz76fkv7m3rg1wp08zhdm5ahj0lvx5rhr21jx712a0nmym"; depends=[ExperimentHub]; }; + NestLink = derive2 { name="NestLink"; version="1.6.0"; sha256="1p6c1bpa0d92p6br9wbrjqgxyxjldlk4qw8m84j1h29prkb66dhr"; depends=[AnnotationHub Biostrings ExperimentHub gplots protViz ShortRead]; }; + Neve2006 = derive2 { name="Neve2006"; version="0.28.0"; sha256="06f9gyczci0nj99pagzssaf853j2biq4k75j6vh6h6mg27kbz2p3"; depends=[annotate Biobase hgu133a_db]; }; + OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="1.8.0"; sha256="0jhcqiqcabrvf4x3vjc58vby01ilw7959b5sjy1w8flpq0m4nvaz"; depends=[MultiAssayExperiment]; }; + OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.12.0"; sha256="0na11zi4dbphvvr0pl4lkaqihyr2bg72cpdrvv1qds236zs4nd0a"; depends=[rJava]; }; + PCHiCdata = derive2 { name="PCHiCdata"; version="1.18.0"; sha256="0g8yicmm4d4c54vgwvsx9k5lfmkkbkjs99vg03x85g9r5h3ifd7f"; depends=[Chicago]; }; + PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.30.0"; sha256="060mwfg4d7kqiryr7v91ifdvrbpzdfawd73yllgs2bfyknc0x0s7"; depends=[affy annotate Biobase PREDA]; }; + PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.24.0"; sha256="0zbzr86yb10vv7fc5g3pys3cmj6400h1wjwjcdb9pbff05ypn9ig"; depends=[PWMEnrich]; }; + PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.24.0"; sha256="0c9rwr5qxz5zydcfg9q12w45w5jsd3sfyp81cy47xy0jbiss5ni6"; depends=[PWMEnrich]; }; + PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.24.0"; sha256="08rdilnjlp2haawyp5drwas0dy786ny4ljb4z257d31vii1awfz8"; depends=[PWMEnrich]; }; + PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.18.0"; sha256="1gylgs0rvm8hdja8iqp4bhz21b80rnlwz3hfr1z7xlhljzj58r11"; depends=[]; }; + PathNetData = derive2 { name="PathNetData"; version="1.26.0"; sha256="16h9jb86xi0fxg8k935yzyk07z7pl7cgfwv7xg767d27n27j6hgb"; depends=[]; }; + PepsNMRData = derive2 { name="PepsNMRData"; version="1.8.0"; sha256="1jivmg2lqyx60s1hxlzfi5xhbcvxjhx6h2wwdaxi8z7qwbss54zr"; depends=[]; }; + PhyloProfileData = derive2 { name="PhyloProfileData"; version="1.4.0"; sha256="12lvh2a403l4j4jb2jfnivdlb4s8mn7bkdgcxwpq8cm4g1xw03ns"; depends=[Biostrings ExperimentHub]; }; + ProData = derive2 { name="ProData"; version="1.28.0"; sha256="1w9z3vl8b5v4ajhdgk67wyp42yqdnjcgjxd64ngjdnhdyain80pn"; depends=[Biobase]; }; + PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.16.0"; sha256="11pacmb36mql7w38f4y0qpcnxsdbkx3dwl216giic10clnv4gbf4"; depends=[CAMERA LOBSTAHS xcms]; }; + QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.20.0"; sha256="1kjgv5vjarkpj593ks33z8mggrlzwacqa68gxz99w5snwaa9bck8"; depends=[QDNAseq]; }; + QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.20.0"; sha256="0hz37vydv5jji4p87ayz7hsk5iq052r910jk2x0rdmic6ikqsyji"; depends=[QDNAseq]; }; + QUBICdata = derive2 { name="QUBICdata"; version="1.18.0"; sha256="1lai9lgvr6wlxrfhhha26xipzgw2zm005b55lss26g07zzln54jv"; depends=[]; }; + RGMQLlib = derive2 { name="RGMQLlib"; version="1.10.0"; sha256="1s8b0d62qrqzkg84dszam7chl3rrdm2lmmyqnv1pil0qy4njb37w"; depends=[]; }; + RITANdata = derive2 { name="RITANdata"; version="1.14.0"; sha256="0lbijw0wrvqdnih6r5rplr1836bz7y3q31h7cmrbhjycd1swz9z0"; depends=[]; }; + RMassBankData = derive2 { name="RMassBankData"; version="1.28.0"; sha256="0af45pmkjin798jzg09946kbp7fcgsz2wva9d5bm4f63qlcdjvfc"; depends=[]; }; + RNASeqRData = derive2 { name="RNASeqRData"; version="1.8.0"; sha256="1q049h87cds5c5nkmcrrzlipcllqpcjcagpvaxjr956wqaca64rg"; depends=[]; }; + RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.28.2"; sha256="01mhm2fgya1nl8syqjya7ymc74kwpffabzhcr4dgzy73x7sy5bcy"; depends=[Biobase fields gdata genefilter lattice MASS RNAinteract sparseLDA]; }; + RNAmodR_Data = derive2 { name="RNAmodR.Data"; version="1.4.0"; sha256="0hc4jjxn7fll5qsg42lrm8d4jcr2a62c2s9j5ji5y0z0hizwph4x"; depends=[ExperimentHub ExperimentHubData]; }; + RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.28.0"; sha256="0b0am8x1fns3mrvhbxandp2r5wlcb8fv5z8dhj3wai79mjypz3v4"; depends=[]; }; + RRBSdata = derive2 { name="RRBSdata"; version="1.10.0"; sha256="1z1dj200qqc9y5swql4azd7h7977p65lnx7sx63xzcrmq7pilm4v"; depends=[BiSeq]; }; + RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.18.0"; sha256="1s9lfynynzdbgm2vdgb3nim1gyb0sgw17r17gjzzz6dd7pj5fkx4"; depends=[RTCGA]; }; + RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.18.0"; sha256="048wrw6s4p24gr9ijj17nzfq4b87vl4m1q7ncis4rc5xza1rfh6w"; depends=[RTCGA]; }; + RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.18.0"; sha256="1gldz4phkrqr2jiy7vbicg7m981i07r0n7nvvb2xqmy65nyby8xs"; depends=[RTCGA]; }; + RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.20.0"; sha256="10i2w5grvdwcisvalxljfglhfmq9sq3c8c4077fmpn2kzb7f428x"; depends=[RTCGA]; }; + RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.18.0"; sha256="0ilbf8ifk2fzlm9bxlka6vwqaz4fdwn71nd2pzzx2nf7vz0cxrb7"; depends=[RTCGA]; }; + RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.18.0"; sha256="0ngkry4vsimpgkj8iy2l16890kw4dampldwx1jnn7cnrh8961h10"; depends=[RTCGA]; }; + RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.18.0"; sha256="0k52934zrdc2a3g2vsjj75f59m7vdfmlsp66wwf78zv1m45i3sjf"; depends=[RTCGA]; }; + RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.20.0"; sha256="0hixibpdslq08848k4085hh5f02fq2mbrabf04ilvmyysw72jdjs"; depends=[RTCGA]; }; + RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.20.0"; sha256="19wfizv7n4zsk11zxqk7hx30g6yg68hkskv5ij4cq8lwwmxn6x5k"; depends=[RTCGA]; }; + RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.10.0"; sha256="1d6j9zbgjz18di0sbgprsw2i9mwkihhasf28j710v62wrgmqa51i"; depends=[Biobase]; }; + RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.10.0"; sha256="1r4a1pjzldj27mnp72fkh54gzmfhsyig07843zv0n6jja4zf8hch"; depends=[data_table]; }; + ReactomeGSA_data = derive2 { name="ReactomeGSA.data"; version="1.4.0"; sha256="10my0a0gk5cb247ffdrgl6ja94apyrv7f31x8h9qhz6hrlcc1w0f"; depends=[edgeR limma ReactomeGSA Seurat]; }; + RegParallel = derive2 { name="RegParallel"; version="1.8.0"; sha256="060srcmdqbxlsi62pq0bswyv6f58wc9kcnwx39isf2z64prvzkj3"; depends=[arm data_table doParallel foreach iterators stringr survival]; }; + RforProteomics = derive2 { name="RforProteomics"; version="1.28.1"; sha256="0pnrfp2i2cqv73bgzf391ydnbjfv9yc0a4pb092x5mrhcxabmw7z"; depends=[BiocManager biocViews MSnbase R_utils shiny]; }; + RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.22.0"; sha256="1aq78hkabpp2075dp97xjiqiyhwpyrxyg5dd3v54w85yagk7jp77"; depends=[GenomicRanges]; }; + RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.22.0"; sha256="0mv6j1s3aih8fy69zhn0ypm8fsrhk0a80ggln25gcdwm5zgjqhkm"; depends=[GenomicRanges]; }; + RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.22.0"; sha256="1s53ay81anij062g1ha55yp4jylrv8csp98s3063cjix42xjncjz"; depends=[GenomicRanges]; }; + RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.22.0"; sha256="0n4pxcy0awcq5mvfqd59djg9p8h7mp7x42qsryh4zrvkc53mk357"; depends=[GenomicRanges]; }; + RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.22.0"; sha256="1bnwfr8z860w1m1xsy1k6jdjwwgpq7b703v0gyxv3gws4lxlyazc"; depends=[GenomicRanges]; }; + RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.22.0"; sha256="1l2rr5dpr88l7ll0dsfwv767jl3lfgd61simng5mjcg8wq08ccdb"; depends=[edgeR]; }; + SBGNview_data = derive2 { name="SBGNview.data"; version="1.4.1"; sha256="168pq5yhdn5cfxvyap1cpby0asblbhk192c6vg0jpvlwxh6djcsx"; depends=[bookdown knitr rmarkdown]; }; + SCATEData = derive2 { name="SCATEData"; version="1.0.0"; sha256="1x8c0w5jf211illrmxhxvm08ms73k0637ky9ws52kayyrbnbz92m"; depends=[ExperimentHub GenomicAlignments GenomicRanges]; }; + SCLCBam = derive2 { name="SCLCBam"; version="1.22.0"; sha256="1rj84zyn39r0xjksx2v76kmn5jvgs4qnjy4r4dk5i917v5p8f62l"; depends=[]; }; + SNAData = derive2 { name="SNAData"; version="1.36.0"; sha256="1mj741xq2kjlj4cry4pfhcrmqsfby7kks2lw26c418prcmqn2lcz"; depends=[graph]; }; + SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.26.0"; sha256="1jima0pkpl4c86gi13kmi9jz7d0v3nsib5844m37942357bqrwgg"; depends=[]; }; + SNPhoodData = derive2 { name="SNPhoodData"; version="1.20.0"; sha256="136inhl5r1r3xyfjg0klkkp0c3gzbp13avjjj9vj1z0cialzg9z9"; depends=[]; }; + SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.22.0"; sha256="184hgw2g3r1p6jsswz2lcs9kyjbg4yw43wz78w5xfwzq78sf2lzf"; depends=[]; }; + Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.18.0"; sha256="14cnfrq3xnka4xl9fag1avmajcnxw36c1nyk03ciq0bz9hsz9rls"; depends=[]; }; + SingleCellMultiModal = derive2 { name="SingleCellMultiModal"; version="1.2.4"; sha256="0qwmasqw2x9ynmsy4a32f6m31rf8p6ibp8i44rg0pd936smkf9kl"; depends=[AnnotationHub BiocFileCache BiocGenerics ExperimentHub HCAMatrixBrowser HDF5Array Matrix MultiAssayExperiment S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; }; + SomatiCAData = derive2 { name="SomatiCAData"; version="1.28.0"; sha256="03k5f5dmc9afc6i4kw3yrd8d9al0zpr4rninh1zh31nq9misrlww"; depends=[]; }; + SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.26.0"; sha256="0vs4zgp5lbjffdn38rhpwnrmz1nxiwp7l1f55mbcj4hb9y3v891h"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; }; + SpikeIn = derive2 { name="SpikeIn"; version="1.32.0"; sha256="0layhz7xnl8n91acflzk4yabp1n70c4lx7dpym2hhqq9w3rq7f52"; depends=[affy]; }; + SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.30.0"; sha256="0raxvskb1wpj7hxl2s2gfyaiw1d8978j6z2mbf3nsn0gijxaqby5"; depends=[affy Biobase]; }; + TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.26.0"; sha256="1ar145kihn1q5s3chs7l82g3rzsz5nr40glsham7ykqfnl2f8b2z"; depends=[Rsamtools xtable]; }; + TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.26.0"; sha256="152mxaq38w4rrcn5p4wwaich6cy502i2w24p3ral9hhn5pr0mlww"; depends=[]; }; + TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.14.0"; sha256="09hid6vblnmff7p5x0x5wa4svnqh4708560lay58i4zdxj9nkqwr"; depends=[SummarizedExperiment]; }; + TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.10.0"; sha256="1ly0ajjfqmhq7p04lk1lb5vngk7g2hc2l1xi6qqp5k7rjh0qd9cw"; depends=[]; }; + TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.10.0"; sha256="15rbr5i8hmisq5harwyp0ysaxzs80bv83glangwch3ljxjcg1s1w"; depends=[Biobase]; }; + TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.10.0"; sha256="0k3m6gv37s8f0gzda9kbw6y155pbna3c694a0andw3h5fma40s5y"; depends=[Biobase]; }; + TENxBUSData = derive2 { name="TENxBUSData"; version="1.4.0"; sha256="0j85a48pzy95jghmm28yr7xpsfkkpyq7pa7ighnrlk694z61la2n"; depends=[AnnotationHub BiocGenerics ExperimentHub]; }; + TENxBrainData = derive2 { name="TENxBrainData"; version="1.10.0"; sha256="1xwqagw4zx316mlx1biswrh78va6mcsxqlygybkppcjni3bczx5b"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + TENxPBMCData = derive2 { name="TENxPBMCData"; version="1.8.0"; sha256="1sam5nmpxs57nyxd4g8si43dx908nlfs0c7ymxdhad1da5x3ax7l"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + TMExplorer = derive2 { name="TMExplorer"; version="1.0.1"; sha256="0dxqjcmfk1h8v08722nczqkkpw90cmdzl7wv579gbxqap4hp1l38"; depends=[Matrix SingleCellExperiment]; }; + TabulaMurisData = derive2 { name="TabulaMurisData"; version="1.8.0"; sha256="1hwh3l5ri3grzjici6kznqzxvhmhzkqb8ia6lgvwk2af7mv12zff"; depends=[ExperimentHub]; }; + TargetScoreData = derive2 { name="TargetScoreData"; version="1.26.0"; sha256="0r5vgc88ipqxmpmhvi58wjcm6m7dbm6paf2r4nj2xbs2czww9r1v"; depends=[]; }; + TargetSearchData = derive2 { name="TargetSearchData"; version="1.28.0"; sha256="031ivpg8jz5hd6gl3rhpimgymm1n4wcad5y9d3nfl8afw8aar3qd"; depends=[]; }; + TimerQuant = derive2 { name="TimerQuant"; version="1.20.0"; sha256="13ylpp0dfb12vpcy88gdwf1632yxaqxn5s7j4z4x0phdm0s8brnl"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; + VariantToolsData = derive2 { name="VariantToolsData"; version="1.14.0"; sha256="0jnapsbmr4q7kkfm2z09k6srphch6izsv1ywig39j5hyqzv53gc0"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; }; + WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.22.0"; sha256="1cbcqrclz5pvjaydg23z5kcc2shnqvhri8qm4n107gv9bld3772j"; depends=[]; }; + WGSmapp = derive2 { name="WGSmapp"; version="1.2.0"; sha256="02h2n4jbh370rgk3l54aip1v89kvb80p0ml2lzmwwj8sy2c6h8ky"; depends=[GenomicRanges]; }; + XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.28.0"; sha256="1ml5ksa1sfxcw594h5yv1kk7aycfi85jg0rs3mb3dc5cv6sx1z6l"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; + adductData = derive2 { name="adductData"; version="1.6.0"; sha256="1vac40kjdfqbyjcb1if15i0w19bksyr4xv8gp377whpqiny1v8k8"; depends=[AnnotationHub ExperimentHub]; }; + affycompData = derive2 { name="affycompData"; version="1.28.0"; sha256="1rq6m4gkabrvcbvnf1sqx856jyxvggqvk56c3mi56lzw2wy1nqh8"; depends=[affycomp Biobase]; }; + affydata = derive2 { name="affydata"; version="1.38.0"; sha256="1p0pzfzczmsdf2w463wcj1yjcnrw02wj1m54d5hh1fc34fh4w1z3"; depends=[affy]; }; + airway = derive2 { name="airway"; version="1.10.0"; sha256="0gy4j014sgrwbksqwjf9gz1pqi36vvxnhxjmll5srx6qf40f9cqa"; depends=[SummarizedExperiment]; }; + alpineData = derive2 { name="alpineData"; version="1.16.0"; sha256="14b5vzizm9wj1s9pmrp93japwwlpb65ksf49i824g4q90z8qkp9p"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; }; + antiProfilesData = derive2 { name="antiProfilesData"; version="1.26.0"; sha256="182p2nkdd3mc66f7lmcsgnhk2qya3hi3hyrr85m2gva14pvxja9y"; depends=[Biobase]; }; + aracne_networks = derive2 { name="aracne.networks"; version="1.16.0"; sha256="0hjzs32xim23ixqvhmii76qa89v88wzq3mq84zpi6q7wdyqbrw85"; depends=[viper]; }; + bcellViper = derive2 { name="bcellViper"; version="1.26.0"; sha256="1mqil6pbmqhj5hjjrai5ing3qnzggddcf6mn2a02d8ri5nnjmhwy"; depends=[Biobase]; }; + beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.28.0"; sha256="0insx6l5xj93yivkamisifib4mn3ifq95zm3l0sxq0phgz8xqjfp"; depends=[beadarray Biobase]; }; + benchmarkfdrData2019 = derive2 { name="benchmarkfdrData2019"; version="1.4.0"; sha256="1v9jr9hhgxmqk87a16syqgqjak7vr9jm2js4i82f05mncf0x2hkl"; depends=[ExperimentHub SummarizedExperiment]; }; + beta7 = derive2 { name="beta7"; version="1.28.0"; sha256="1rr2b604h1a524kad21h645aa2ajcmcgf7wsf660ixar06cx6ar7"; depends=[marray]; }; + biotmleData = derive2 { name="biotmleData"; version="1.14.0"; sha256="1cidmip2ra2qi9qmdxddidj9xwhdc42qm8bynffr3nqwj1s95vjd"; depends=[]; }; + biscuiteerData = derive2 { name="biscuiteerData"; version="1.4.0"; sha256="1jl9ilp99b11v7r1f8kxc3qk7xm5i03pwszxyrfn27w7xdq9xp1p"; depends=[AnnotationHub curl ExperimentHub]; }; + bladderbatch = derive2 { name="bladderbatch"; version="1.28.0"; sha256="0irfg4wnmhmhqbga4mmxdaj6w7wfcgpzwi4mfg0bh9ixzdsbnp6m"; depends=[Biobase]; }; + blimaTestingData = derive2 { name="blimaTestingData"; version="1.10.0"; sha256="0kwz3dwncfnvmcyzvscc916bqwlncrpgfyv91m31hjlxp729hfa8"; depends=[]; }; + bodymapRat = derive2 { name="bodymapRat"; version="1.6.0"; sha256="0amx5fwvrl7jvmqd2c87w80qaaps89cjnq0rijhl475na0cim8dg"; depends=[ExperimentHub SummarizedExperiment]; }; + brainImageRdata = derive2 { name="brainImageRdata"; version="1.8.0"; sha256="13nfwbsf76vgx32m3jjs1lhng31wc2agm735pgn58wj38ndkr3ky"; depends=[ExperimentHub]; }; + breakpointRdata = derive2 { name="breakpointRdata"; version="1.8.0"; sha256="0z0bkdnn03xxwir89pn980zqylbyjcliqphdgqb38p5q14iqbmqv"; depends=[]; }; + breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.28.0"; sha256="1y5vk8rjgp1x2cphs11yhnbyix020f2z8gb58bfgm4nnyc1h6l6k"; depends=[]; }; + breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.28.0"; sha256="14cfyrjq7pskcz3zk3x25hl0ykg941zxp5sngkszhf93gxq06icp"; depends=[]; }; + breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.28.0"; sha256="0as7j31mm3z9fwxs48bbq20qamsfvp54c9y66a9mk5sz2dbnf1wg"; depends=[]; }; + breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.28.0"; sha256="0499n7zdpn810wbnpq1yd84ary5js1rxaj9y9qnpsm1r7fz0dqs7"; depends=[]; }; + breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.28.0"; sha256="0n7pphgcihhda5h0p95mg71hdw2274r857dl97ph00w4n756dyph"; depends=[]; }; + breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.28.0"; sha256="1j3api7z0f4ip1dvlhcz8c1hdb17f55igq781zdjswrn2gnph0wc"; depends=[]; }; + brgedata = derive2 { name="brgedata"; version="1.12.0"; sha256="14akzyvj7lngi8b0jfahx2j0bhqci7zyl1551jz7w70h4sxwnyaw"; depends=[Biobase SummarizedExperiment]; }; + bronchialIL13 = derive2 { name="bronchialIL13"; version="1.28.0"; sha256="1mlk3k75hqn952g97bvyndrb46wddh7xf1krpz83ys196v8q30d5"; depends=[affy]; }; + bsseqData = derive2 { name="bsseqData"; version="0.28.0"; sha256="0s45cyqlm1cqb682c0rjvgzgqa8zdizwy1x362bvd20nyl43y3vl"; depends=[bsseq]; }; + cMap2data = derive2 { name="cMap2data"; version="1.26.0"; sha256="01mii0n6hqyfq5hvc12748px3f2idp8rrmikpzh646waxgb4jab4"; depends=[]; }; + cancerdata = derive2 { name="cancerdata"; version="1.28.0"; sha256="11wy2ginxafv7wwaxqnkyim864hhhf4v6gnmwb7ccbvr0jz8sh74"; depends=[Biobase]; }; + ccTutorial = derive2 { name="ccTutorial"; version="1.28.0"; sha256="0a25qy3b7y9rl77jzsl8s8ywvdnq2049l6jg4jav4w2rivr0lfm1"; depends=[affy Biobase Ringo topGO]; }; + ccdata = derive2 { name="ccdata"; version="1.16.0"; sha256="12gqyva7jgqjlfj2xyji9b0dzldii8h6c741q0dpjhz7yr0k9wgz"; depends=[]; }; + celarefData = derive2 { name="celarefData"; version="1.8.0"; sha256="0rhq2p6ldibcf3cw2x085y7pp3kxv8wpy3k42148d1mgyz2xgj8n"; depends=[]; }; + celldex = derive2 { name="celldex"; version="1.0.0"; sha256="17mbghg36216zc7amwhmkizfc4whzqvrwsspl1ab6cdfbwn9bysk"; depends=[AnnotationDbi AnnotationHub DelayedArray DelayedMatrixStats ExperimentHub S4Vectors SummarizedExperiment]; }; + ceu1kg = derive2 { name="ceu1kg"; version="0.28.0"; sha256="0mcwvydv3dna578h1g5a8gpvk6bsj4vr2j08xwmxq9g4k0j74v5z"; depends=[Biobase GGBase GGtools]; }; + ceu1kgv = derive2 { name="ceu1kgv"; version="0.32.0"; sha256="018jkf6nmllyj1a1k2gxsgllrrkggrd7b6p2m96j8r7b9c112dbd"; depends=[Biobase GGBase]; }; + ceuhm3 = derive2 { name="ceuhm3"; version="0.28.0"; sha256="0j97cwy08657d1b5c0sj7in341y0hadi2d6wjnrrmkw69xy3nbqi"; depends=[Biobase GGBase GGtools]; }; + cgdv17 = derive2 { name="cgdv17"; version="0.28.0"; sha256="0dkml0za5yvcrw8yyam2z9vgxqhdb7va19wwi0sqwlxgr0jjzka4"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; + chipenrich_data = derive2 { name="chipenrich.data"; version="2.14.0"; sha256="0pmz0rrd0hampzw72jqv7y8p1f165pkq0sir4xrj91xarnvyh4bk"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; }; + chipseqDBData = derive2 { name="chipseqDBData"; version="1.6.0"; sha256="0nnyi95h4wzzidjblzgcxrw806zv11411vnd0h7m4qqgdmsf8zcx"; depends=[AnnotationHub ExperimentHub Rsamtools S4Vectors]; }; + chromstaRData = derive2 { name="chromstaRData"; version="1.16.0"; sha256="0ph80d53598635bb8g61acg5rqwnj8644a0gh297r4hgbvwlflab"; depends=[]; }; + clustifyrdatahub = derive2 { name="clustifyrdatahub"; version="1.0.0"; sha256="0h7i4s98sakyqiix8g65wqfhjqs22fni20sbdkhmnf4lji6dv1jp"; depends=[ExperimentHub]; }; + cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.26.0"; sha256="0qfvijv1hmj5sqmmrcvnq06l9lclk01r48jac958bibh81vw7n2c"; depends=[cnvGSA]; }; + colonCA = derive2 { name="colonCA"; version="1.32.0"; sha256="0r2670781hz1xgsn4l9np7svjjf0awlyk85zb4vycjyv38k7rllc"; depends=[Biobase]; }; + curatedAdipoArray = derive2 { name="curatedAdipoArray"; version="1.2.0"; sha256="14bnizcx2wr87nkl4f74mm4kpbi725486ja68yy0r6y2dj65q29b"; depends=[]; }; + curatedAdipoChIP = derive2 { name="curatedAdipoChIP"; version="1.6.0"; sha256="0w9dfzmkn3vpqbzy088gx1bab2k760w3xsrlhnggsq43qkygyjzm"; depends=[ExperimentHub SummarizedExperiment]; }; + curatedAdipoRNA = derive2 { name="curatedAdipoRNA"; version="1.6.0"; sha256="0irpqyva4bvdrph4v6f0vyh5lwsyaylsj06fji90ssia3jd7nn6p"; depends=[SummarizedExperiment]; }; + curatedBladderData = derive2 { name="curatedBladderData"; version="1.26.0"; sha256="13ji5a6yfbk84araf11ynqy85psk68grk57bcha4r25x6w1anird"; depends=[affy]; }; + curatedBreastData = derive2 { name="curatedBreastData"; version="2.18.0"; sha256="0nym274s6x5rcj7s9sn5zimv1vkc3llwz65hpv99ip0gm4pn5hqm"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; + curatedCRCData = derive2 { name="curatedCRCData"; version="2.22.0"; sha256="0zb6f6iccam8dgkr8qlr5qarn2f8rbcy93rzc4f3s29m9p2d8srl"; depends=[BiocGenerics nlme]; }; + curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.20.0"; sha256="0b5y1qh7qq6q79irsg72274cbz7b4ibv8z4n2jpjfnfbacr3w6ih"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; }; + curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.28.0"; sha256="0ghfy49zg7v8971vks9sdshk61bnzsj8h1hj7x2c18nvsnfz65zm"; depends=[affy BiocGenerics]; }; + curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.12.1"; sha256="16xilq3dgsj8n6v174iczzv3i4mkrflhdrj0bnf4pxmfkbmf02i4"; depends=[AnnotationHub ExperimentHub HDF5Array MultiAssayExperiment S4Vectors SummarizedExperiment]; }; + davidTiling = derive2 { name="davidTiling"; version="1.30.0"; sha256="1ql57f0wd3xks70dnw5f8sghm0k6fsc11yp4z4ibcpl7wma43hd5"; depends=[Biobase GO_db tilingArray]; }; + depmap = derive2 { name="depmap"; version="1.4.0"; sha256="01cgd87mkckmgyri48d4h9lmhlm520mbc917gnrbygha7zrsgrz9"; depends=[AnnotationHub dplyr ExperimentHub]; }; + derfinderData = derive2 { name="derfinderData"; version="2.8.1"; sha256="13swii4dl3n7cb4w656as27lgxr8bxc3sdj12fwlyv8yz9dd7b24"; depends=[]; }; + diffloopdata = derive2 { name="diffloopdata"; version="1.18.0"; sha256="0pdhw9m50pm99frw2ifn3pbzd47q36kla46s44kpq6ak9hn05253"; depends=[]; }; + diggitdata = derive2 { name="diggitdata"; version="1.22.0"; sha256="0r9kmg3xqmy8cx8w2g4lf8baap9aid7yikilyzxzc9n650l27fh9"; depends=[Biobase viper]; }; + dorothea = derive2 { name="dorothea"; version="1.2.2"; sha256="172zwgppy0ral48f08wzid11m2ixhxb0ycyp3514kgr22w31bnni"; depends=[bcellViper dplyr magrittr viper]; }; + dressCheck = derive2 { name="dressCheck"; version="0.28.0"; sha256="0kcaa44phaxg4dqgq195bc1fpxws40jipfz3lbd7gg7xyp6z7n8m"; depends=[Biobase]; }; + dsQTL = derive2 { name="dsQTL"; version="0.28.0"; sha256="09ihlrljfz86m14gllmwkp2i947zv3zia1ri6yp651xr049xp2br"; depends=[Biobase GGBase SummarizedExperiment]; }; + dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.30.0"; sha256="1w0glg3sqvyv790qgdyb2jf717yqsd7vpaysx59rakgx52bbhcjr"; depends=[GEOquery marray]; }; + ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.30.0"; sha256="1wk1k46nlphqyv4010glmv1wqrlsq16lqjqrggp5f42p98fmc6mb"; depends=[affy ecolicdf]; }; + estrogen = derive2 { name="estrogen"; version="1.36.0"; sha256="1ry13idsdiwwhcj12wl8mxji0771cqm4q4rhgxxc7hcldvqx8gkg"; depends=[]; }; + etec16s = derive2 { name="etec16s"; version="1.18.0"; sha256="1z3nh61r6gmqr29v2rkfil0a4pgw55ysya86yw1jg7bg0jp9i781"; depends=[Biobase metagenomeSeq]; }; + faahKO = derive2 { name="faahKO"; version="1.30.0"; sha256="15wscf2f07pjvs3yrdc7lcf9a8wik9rwiljbx49cadvhm8gh80fm"; depends=[xcms]; }; + fabiaData = derive2 { name="fabiaData"; version="1.28.0"; sha256="1jk4na7sbhxkv73yj0b5jm36mpni8617r52nvislj83k3pp11viv"; depends=[Biobase]; }; + facsDorit = derive2 { name="facsDorit"; version="1.32.0"; sha256="0pmzkryl3qj8fagf2jhgqc6w5l8r9vwfx8hv8dihdda3h7kyisv4"; depends=[]; }; + ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.28.0"; sha256="0aghx2bv915nzx5rfmyijg2pv1pipf5fq88y3n01ca8lh7c2l0kd"; depends=[lumi]; }; + fibroEset = derive2 { name="fibroEset"; version="1.32.0"; sha256="02mf174z9fwywaskajxcdpmpmqagbw05g8x9bz6518xw54r0yxw0"; depends=[Biobase]; }; + fission = derive2 { name="fission"; version="1.10.0"; sha256="11aacszkknddaxg9i8vnwhdw4w6mr9y8qkddwgwhv305y4hdaxg7"; depends=[SummarizedExperiment]; }; + flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.26.0"; sha256="17dzilkn4vvn5s56gz85h2nfvkfvvg7a2hvc9vlzz46bhldjh639"; depends=[flowCore]; }; + flowPloidyData = derive2 { name="flowPloidyData"; version="1.16.0"; sha256="1ixxdf15zxkxmvfbq05w505hhy7ybq6bcm5hbyhjjxgm29lnk2xi"; depends=[]; }; + flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="3.2.0"; sha256="15r72pgbggp1b61bkxb775bsga56za2l7a72bkhb3065k6qndjw8"; depends=[]; }; + frmaExampleData = derive2 { name="frmaExampleData"; version="1.26.0"; sha256="07fj295ndshyxl0k3gxws9643wwk2xqshbnmm7bszai3x3ngiqc5"; depends=[]; }; + furrowSeg = derive2 { name="furrowSeg"; version="1.18.0"; sha256="0dw0r35gng707zfzmw6mza9zm9k4a38vsm6ghznakygffawan5dg"; depends=[abind dplyr EBImage locfit tiff]; }; + gageData = derive2 { name="gageData"; version="2.28.0"; sha256="16lmnvmbykvbdgwyx7r2jc217gb9nidn81860v5kri99g97j4jdn"; depends=[]; }; + gaschYHS = derive2 { name="gaschYHS"; version="1.28.0"; sha256="1rir2b0zrgc4jrbfn5ah1apfgk04dxbp1ss7n68scm1880gjha1v"; depends=[Biobase]; }; + gatingMLData = derive2 { name="gatingMLData"; version="2.30.0"; sha256="1a5516ccps6mhklbjmzp33dr1pcq012ryvl4acmw85kr9hw5bdws"; depends=[]; }; + gcspikelite = derive2 { name="gcspikelite"; version="1.28.0"; sha256="185x023lxyvb2mza22m65y94xsl6ydk7bbpps287gp00d571skyz"; depends=[]; }; + geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.26.0"; sha256="02llrmqd6pl882p0s0jb9cqi2jl8p7wwn6gyihkh1x6crgcsklkz"; depends=[GenomicFeatures rtracklayer]; }; + genomationData = derive2 { name="genomationData"; version="1.22.0"; sha256="0igjsvfnws3498j65ifniw0kbxfqpfr59rcjddqvq4zsj453fx1g"; depends=[]; }; + geuvPack = derive2 { name="geuvPack"; version="1.22.0"; sha256="1b4bjrk3lb3ina3xlb6f0ii0a0apbk06j2ilfkrv523rh55xgnfv"; depends=[SummarizedExperiment]; }; + geuvStore2 = derive2 { name="geuvStore2"; version="1.19.0"; sha256="15f60889x0mf8ccrzxp3bsrw84r6wl5as2ivgh8ql0f0kyzprapk"; depends=[BatchJobs GenomicRanges gQTLBase]; }; + golubEsets = derive2 { name="golubEsets"; version="1.32.0"; sha256="1rggm375b0856qs84gg64xc2m06xq5y7smbwsbvxlnhrbayfgg4i"; depends=[Biobase]; }; + gpaExample = derive2 { name="gpaExample"; version="1.2.0"; sha256="10763nsi93rwrsr5zw5bqmzdfg5b1midcf0461i1gqisj8x6wyxy"; depends=[]; }; + grndata = derive2 { name="grndata"; version="1.22.0"; sha256="1av4fbdg835qx67bzyfxwbwyp7rskpi4w60g1r6vvs8grfwzjs5k"; depends=[]; }; + gskb = derive2 { name="gskb"; version="1.22.0"; sha256="12kb855yjbdaf5i14x4b8vzzwy4j2v8mawdrwdncwg7j70kc478n"; depends=[]; }; + h5vcData = derive2 { name="h5vcData"; version="2.10.0"; sha256="1rrpq1w2n679glq30z132v3mhja515x62jgvmjcy0h3n4wczski2"; depends=[]; }; + hapmap100khind = derive2 { name="hapmap100khind"; version="1.32.0"; sha256="0lf4fkdikdgg90amwdsb30z582l28g232x0yamc8ymajmq0382qa"; depends=[]; }; + hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.32.0"; sha256="0c4wwqmvm185iw65bjd28mjjr5bkzj4vx4j2awlz0pscsqidx5fb"; depends=[]; }; + hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.32.0"; sha256="189716h3c1v83hayh9mc630n9aawcg1kp94ka47fdsw7w7k4i60v"; depends=[]; }; + hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.32.0"; sha256="0ns6qz5fmwbdf0hlymwzgzgqaqa95cnwwvdrrw4pszzi86pagqag"; depends=[]; }; + hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.32.0"; sha256="1jv8ikdb2cy8a8bm375w24zkw9ldfdijnnsxrj95h35f4blnx3d7"; depends=[]; }; + hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.32.0"; sha256="0gi7m2qprggaq0fxwda0n7fyk6zvvz60avby78j75xipw4mq1dy3"; depends=[]; }; + harbChIP = derive2 { name="harbChIP"; version="1.28.0"; sha256="0nnyvs1xdiq9ik4jig87xgdq784fzq7imd5v4i0l20p80w4cccs5"; depends=[Biobase Biostrings IRanges]; }; + healthyFlowData = derive2 { name="healthyFlowData"; version="1.28.0"; sha256="0fky9w11k2zv58768w5ivafdvh3nfg53vx74cmq6jmgcp4lfg714"; depends=[flowCore]; }; + hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.28.0"; sha256="1isdnvalsd61kqh6r4dq76bgds35f7ag0309cxwji6dqhw7qs3dc"; depends=[]; }; + hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.10.0"; sha256="0hrmqxp66mw2s04jdh5f5866a75kpbg4nf796f2fb090hi83gqrv"; depends=[Biobase]; }; + hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.28.0"; sha256="0qfbf1m4pwfq26svcc20pn6yqz7hh6q9hmvgz832c1mgy1mza9ab"; depends=[]; }; + hgu2beta7 = derive2 { name="hgu2beta7"; version="1.30.0"; sha256="1kiyj39hqpvjz21v64k59vpahxq1b0wa3bdvbvdsak2g6py6f512"; depends=[]; }; + hmyriB36 = derive2 { name="hmyriB36"; version="1.26.0"; sha256="0i66kbdrry5qclh615w94gpr5g7h5kpqzs6x4sb290al7kvya8q7"; depends=[Biobase GGBase]; }; + humanStemCell = derive2 { name="humanStemCell"; version="0.30.0"; sha256="02vh8xykbjc287hkayp7i6v2rydn26g0jj6njr189dha9y7amrlc"; depends=[Biobase hgu133plus2_db]; }; + kidpack = derive2 { name="kidpack"; version="1.32.0"; sha256="1knzb2rwa58i0d8snfgq342qm9qch3zvv38fid5cs3a4kvy9301p"; depends=[Biobase]; }; + leeBamViews = derive2 { name="leeBamViews"; version="1.26.0"; sha256="0x0i4v8li4ina1rdxps51m69mlla2v7w8f4rsnsa4fhljjizilii"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; + leukemiasEset = derive2 { name="leukemiasEset"; version="1.26.0"; sha256="1v2axfyjmsnqgjrwa9pzjmdkyiyrdhc6hia3blrmhlj2wi307pnq"; depends=[Biobase]; }; + lumiBarnes = derive2 { name="lumiBarnes"; version="1.30.0"; sha256="09nindp52bh8pzyjb5mq2210i5643srmzrzwf65p02y9444jx74b"; depends=[Biobase lumi]; }; + lungExpression = derive2 { name="lungExpression"; version="0.28.0"; sha256="1zvq681zi26568ispcsnk6y6g2vxm8zqmglwg5k31p8hk3j3dc45"; depends=[Biobase]; }; + lydata = derive2 { name="lydata"; version="1.16.0"; sha256="07w87qv15physk1h04l06514z20hh1y1hm9g13swj381ivd81g2a"; depends=[]; }; + mAPKLData = derive2 { name="mAPKLData"; version="1.22.0"; sha256="1003cf8malvh9jzykcps7704053g8nlys1ibaixa8m097flrh1y1"; depends=[]; }; + mCSEAdata = derive2 { name="mCSEAdata"; version="1.10.1"; sha256="1fbalqmy2f3wvlnhm0x3jz7hjbrdfxzi2xd4728q9xkhijg4rzca"; depends=[]; }; + macrophage = derive2 { name="macrophage"; version="1.6.0"; sha256="0f3khznbvixqm31avs3bzjp2g6n9ggk82rwklg59r32f81vdv263"; depends=[]; }; + mammaPrintData = derive2 { name="mammaPrintData"; version="1.26.0"; sha256="12b1cxfhvv88xz28qgqdpj67ymz54h48pi38pnagmg0521qp06cx"; depends=[]; }; + maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.34.0"; sha256="0km1q7ghvpd67ayqkck2wjcvklpjwwc65ymind04m7rjvlka64v9"; depends=[]; }; + mcsurvdata = derive2 { name="mcsurvdata"; version="1.8.0"; sha256="0ydqlyb5pbk7rqfbs4vwix616kmjva7c73r6mdklw4a1z0p4faa9"; depends=[AnnotationHub Biobase ExperimentHub]; }; + metaMSdata = derive2 { name="metaMSdata"; version="1.26.0"; sha256="19ckgnlr6vv501ral8lqw0g1wglq40qyh6pbk7dcx6hjicdgyga1"; depends=[]; }; + methyvimData = derive2 { name="methyvimData"; version="1.12.0"; sha256="0wmyjnx8y3vpfayyfxl5mfcfknhibhgdkmzczj50w8ix94pg8wgc"; depends=[minfi]; }; + miRNATarget = derive2 { name="miRNATarget"; version="1.28.0"; sha256="1wygl7gh37hf750wk6z32yhjgmqdk51mphigf7kq8hibdzfc8cc1"; depends=[Biobase]; }; + miRcompData = derive2 { name="miRcompData"; version="1.20.0"; sha256="01zdmn0mk7mlrkf6f59693bq6pjzgyd9i30zcajii0f1qj5y326b"; depends=[]; }; + microRNAome = derive2 { name="microRNAome"; version="1.12.0"; sha256="0fhhgxczj4qjzj7qhcz61yh65dn24pwbzh4ysd3qqajgzaamnwjc"; depends=[SummarizedExperiment]; }; + minfiData = derive2 { name="minfiData"; version="0.36.0"; sha256="0gdyyy30608l0ldyv8w8vzy12m92vk179frwmi7q6mrhpwx71pxm"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; + minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.16.0"; sha256="1m4s8wmz8ipb3bjn661k7dn0q6yphsfym0ascy40p2av6zhq5ajw"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; }; + minionSummaryData = derive2 { name="minionSummaryData"; version="1.20.0"; sha256="1p2pn2gs0d6s4jy5qsyr26vd8cbc48j13496f3n5j6a2c4sqgcs8"; depends=[]; }; + mitoODEdata = derive2 { name="mitoODEdata"; version="1.26.0"; sha256="06vr3r4a3995p99v19a4jk3idgqqgdm5fki400z5x62pmnc2r4k3"; depends=[]; }; + mosaicsExample = derive2 { name="mosaicsExample"; version="1.28.0"; sha256="1z6d4nn36qby1fyi7w9r0dmilqx0w9zid6lzg5swcc4jx58744a3"; depends=[]; }; + mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.28.0"; sha256="0a039mmcawwmr8mmapw6asw6rp9xj29s03zvkndhpg7lx0ss4yi8"; depends=[]; }; + msPurityData = derive2 { name="msPurityData"; version="1.18.0"; sha256="1j0r8kbwfxaw612c2314cw8as3c50yzj46zl5ggqqw6112shjb4i"; depends=[]; }; + msd16s = derive2 { name="msd16s"; version="1.10.0"; sha256="0i4vlssc85k8mcwsbk5dq35xcq8dzwf7bx0ib5np779z8ry92rl3"; depends=[Biobase metagenomeSeq]; }; + msdata = derive2 { name="msdata"; version="0.30.0"; sha256="17vnrvif0i0swxm3vzgmd2ci2wbqc28hg136hpwmid528dpn6myi"; depends=[]; }; + msqc1 = derive2 { name="msqc1"; version="1.18.0"; sha256="0mp5fg3i5sq7xpdslr237b684y0kgkwni7h024pf2ddp46vl3mji"; depends=[lattice]; }; + mtbls2 = derive2 { name="mtbls2"; version="1.20.1"; sha256="1c0jsdlgpjvi096ls2kljhy0rgbw0c9a07fkjdp4sg08j881qvyc"; depends=[]; }; + muscData = derive2 { name="muscData"; version="1.4.0"; sha256="1wl85wwd62341cczyan8ybad5mr359hl9i7fnjcs7mcar3x9d1xf"; depends=[ExperimentHub SingleCellExperiment]; }; + mvoutData = derive2 { name="mvoutData"; version="1.26.0"; sha256="0jcqbbi6qnbmcx8f6j4awrkw5ayx7rkcd669clxk9qinanyj540y"; depends=[affy Biobase lumi]; }; + nanotubes = derive2 { name="nanotubes"; version="1.6.0"; sha256="1njdg1j3f7aszy0msvdh2l1kbllijpp88r788fayh5xn7s0zn4qd"; depends=[]; }; + oct4 = derive2 { name="oct4"; version="1.6.0"; sha256="0m5hwf9lwpaxc5ivplp60598ps9hf16m7bm6gd0ybz6ppf29b4f2"; depends=[]; }; + optimalFlowData = derive2 { name="optimalFlowData"; version="1.2.0"; sha256="0sn3zxbydd3fcn0zw9di5zrfdb827r6vqr5n0j71fssgflakf2gk"; depends=[]; }; + pRolocdata = derive2 { name="pRolocdata"; version="1.28.0"; sha256="0wpnn2ldalcfcvh5b22ilavw4gzz9i2731bva3sk29r0v42nyg2f"; depends=[Biobase MSnbase]; }; + parathyroidSE = derive2 { name="parathyroidSE"; version="1.28.0"; sha256="0xpn0fa4yd1rjdzfvzvaz27qfaccbkw6n46731ya8l7vj5p69ash"; depends=[SummarizedExperiment]; }; + pasilla = derive2 { name="pasilla"; version="1.18.1"; sha256="1b9d9yyjzbazjbfpdlmc2izhrr73q54826bd9gsa2rfr2cxksy6r"; depends=[]; }; + pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.28.0"; sha256="0hf0qblpf4hjcvpqlr609pic859264jwnfx4lr92l39jg839r9z1"; depends=[]; }; + pathprintGEOData = derive2 { name="pathprintGEOData"; version="1.20.0"; sha256="1241i0p6yxhmsw4jq3msc15h3mypajfb8mlp8ngzdmbqyfkz7hwp"; depends=[]; }; + pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.26.0"; sha256="092kgmcfcgyw7wfkl93d6xw8zdx8rxgv3537midzkxv79w44va8x"; depends=[]; }; + pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.26.0"; sha256="0j8qpx9xmfgbbj9q48ry1vgcikh0hd1a4ym2k47kcxgffbml8ibq"; depends=[]; }; + pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.26.0"; sha256="1b6q90c9dp94mhg38ds2z5rqk7f6pl4macv5knj35hlbn858y434"; depends=[]; }; + pcxnData = derive2 { name="pcxnData"; version="2.12.0"; sha256="1cvhakxq4ddlfsn7ddja5xzhf7882wfrcapi037vh0f3rnb70q57"; depends=[]; }; + pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.28.0"; sha256="1cnzw244jwkp3zpip7v9kvaj383bzdfvjxjpm4mapwlmx1068h16"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + pepDat = derive2 { name="pepDat"; version="1.10.0"; sha256="0d5adrh8b9i7xbhi5vrfdijfw20pvl0j07gvwdc6ifcyfc47dd5q"; depends=[GenomicRanges]; }; + plasFIA = derive2 { name="plasFIA"; version="1.18.0"; sha256="1hryz1agnlx7hrylxjspciw97slza6fbrwg68mqrkl8xl9z8sn3b"; depends=[proFIA]; }; + ppiData = derive2 { name="ppiData"; version="0.28.0"; sha256="0rkmw86xzcjhahfdmrnani2ipps626jj68sgbh26bj2d809jc177"; depends=[AnnotationDbi graph]; }; + prebsdata = derive2 { name="prebsdata"; version="1.26.0"; sha256="182fll78mvn3bqvvwz7pirr830yw0iqvynscjxvgh19fj5gj9mmp"; depends=[]; }; + prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.18.0"; sha256="1anbpjlrwvnrh5l2v9v34rrws1jw6i5zv352dklhqb9ayw25p8pm"; depends=[Biobase]; }; + prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.18.0"; sha256="04gly2fxyngwbsz748my157358a7h0qqiqvg6bvm5zap0x93j3i9"; depends=[Biobase]; }; + prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.18.0"; sha256="1z7fv7wnqs5d8m56kcizdrjh85fbykrb2r42xbg5l2vj5vgapsf4"; depends=[Biobase]; }; + prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.18.0"; sha256="0fljj4ybrpry7sjq7l1g9kxv44gyqpih31ysiqbc6sday2az4k6a"; depends=[Biobase]; }; + prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.18.0"; sha256="1kdrc8nxwdr8yf5b24jvlx9cb05iflvvxpc3ix2fsivzfhnh9d20"; depends=[Biobase]; }; + pumadata = derive2 { name="pumadata"; version="2.26.0"; sha256="1k3yvpgpbyhnncxa6fgqyaw23ym8z8dqi6fbskg6k8s1a8ddrz66"; depends=[Biobase oligo puma]; }; + pwrEWAS_data = derive2 { name="pwrEWAS.data"; version="1.4.0"; sha256="0hwcrhb305kq9d104n4l024ywvxissjhr5pyp2vgc9n1y13q53hm"; depends=[ExperimentHub]; }; + qPLEXdata = derive2 { name="qPLEXdata"; version="1.8.0"; sha256="0mp4sa27k0ar6xbjjn0vpyf7hsq4fsnn6fmif1a5x03q8wjbbnn7"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; }; + rRDPData = derive2 { name="rRDPData"; version="1.10.0"; sha256="0r5zjf9aklhczshgafdmq21dq24ax5vr4akn2ivymarriwxdry1h"; depends=[rRDP]; }; + rcellminerData = derive2 { name="rcellminerData"; version="2.12.0"; sha256="00awxpisrhpqqs80jkmjjk7d8gqchzihw95bp7ix0dr4hif0rxvm"; depends=[Biobase]; }; + restfulSEData = derive2 { name="restfulSEData"; version="1.12.0"; sha256="0z66kkwwdwkpkbdxzs3mwv34y4r20wsz82337wvx5mz2hix7y3zg"; depends=[ExperimentHub SummarizedExperiment]; }; + rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.28.0"; sha256="1za1qxvrxg5x8v5vmy9n4mknli9ljnap2acr08fqqr7l87dkrahk"; depends=[]; }; + sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.14.1"; sha256="1v691pdllj2nsvarli36xdgl1fsqwd2z6m5kfd9lp18sa3913w2l"; depends=[SummarizedExperiment]; }; + scRNAseq = derive2 { name="scRNAseq"; version="2.4.0"; sha256="10wq3n2v88rhaddvda627d5lghlxgvkwr3v8i2smkvcpwiw8q3cq"; depends=[AnnotationDbi AnnotationHub BiocGenerics ensembldb ExperimentHub GenomicFeatures GenomicRanges S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scTHI_data = derive2 { name="scTHI.data"; version="1.2.0"; sha256="0igwi7mnv6fksym5vk9m9gmrz8gbdrfsbybd4rqw8dwx1dab4a8h"; depends=[]; }; + seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.22.0"; sha256="1csngkb6a39z6mg1dav5fq1s3hymg89zcfk8djyllwgii98s2p98"; depends=[]; }; + seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.26.0"; sha256="0v0f4fkc5v3z4zp3dfp882mrapzmslmvgffrfszy1cln14w4hl7q"; depends=[]; }; + seqc = derive2 { name="seqc"; version="1.24.0"; sha256="021nvhm5r8n4rdrpl81x516jhm5mbwd5g4xwgaf6clz5vaa84w1v"; depends=[Biobase]; }; + serumStimulation = derive2 { name="serumStimulation"; version="1.26.0"; sha256="1qsrf53prbmighqwacpvbhq5c30cgnvy7d2mhrnl6bh2bllhbim7"; depends=[]; }; + sesameData = derive2 { name="sesameData"; version="1.8.10"; sha256="1aa3x49h9cnx9y8m2l6y9673772nj4is44igs1r2cwg0c6nv40mh"; depends=[AnnotationHub curl ExperimentHub rmarkdown]; }; + seventyGeneData = derive2 { name="seventyGeneData"; version="1.26.0"; sha256="17x8clcw46s7rdv7kqsail2gx19h634q5nkpf7sphhs5i2yv042l"; depends=[]; }; + shinyMethylData = derive2 { name="shinyMethylData"; version="1.10.0"; sha256="11y87nbj1npww9r4l7h4sy6fdlp2gd92hgp8zw34y1x1h3fqrpml"; depends=[]; }; + signatureSearchData = derive2 { name="signatureSearchData"; version="1.4.0"; sha256="1fhyi6dc185ff417516m6pn5iyrq05sl5f7qcbys4916lmhqkj46"; depends=[affy Biobase dplyr ExperimentHub limma magrittr R_utils rhdf5 signatureSearch]; }; + simpIntLists = derive2 { name="simpIntLists"; version="1.26.0"; sha256="0z2yll47ym8zc26mnn6ra7xii714fai3pxijck92spw667br3sbx"; depends=[]; }; + spatialLIBD = derive2 { name="spatialLIBD"; version="1.2.1"; sha256="1zvf0jygcn0bq789kn8aswdx4sf7sgkzy8na14r3qzmxal3lm9q3"; depends=[AnnotationHub benchmarkme BiocFileCache cowplot DT ExperimentHub fields ggplot2 golem IRanges jsonlite plotly png Polychrome RColorBrewer readbitmap S4Vectors scater sessioninfo shiny shinyWidgets SingleCellExperiment SpatialExperiment SummarizedExperiment tibble viridisLite]; }; + spqnData = derive2 { name="spqnData"; version="1.2.0"; sha256="163gq01flwf6hssb3l9kal4317gzd5wyf6zk21i0axng8dd3mq0r"; depends=[SummarizedExperiment]; }; + stemHypoxia = derive2 { name="stemHypoxia"; version="1.26.0"; sha256="1vfz250ms272qbddsfwqjpjzkn5l24ik1jpfym5s6p7jc4mvvljp"; depends=[]; }; + stjudem = derive2 { name="stjudem"; version="1.30.0"; sha256="02m160cv70zl011dbhkx7b4qh84lpniymzc46cdlmgvx2v2p765v"; depends=[]; }; + synapterdata = derive2 { name="synapterdata"; version="1.28.0"; sha256="1v4w285m61v8gpm474nj9lskwwp3j9q65pna96nabilkrdyydcns"; depends=[synapter]; }; + systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.18.2"; sha256="09bcpxa2l8xrc68cmp57d8f2ysv5jp8hrwl55bwvs4z5wwmgspzg"; depends=[BiocGenerics jsonlite remotes]; }; + tartare = derive2 { name="tartare"; version="1.4.0"; sha256="0hsm7z2isyskmmk6im88jhzvxir5ax7nvrgsbkk2dks7gkqqwsv1"; depends=[AnnotationHub ExperimentHub]; }; + tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="1.8.0"; sha256="1yx3j10fy8ki4ghmmjsjqs8wp59pfl2kp2l9pgjn4fpd5vnd5kvp"; depends=[bsseq ExperimentHub knitr]; }; + timecoursedata = derive2 { name="timecoursedata"; version="1.0.0"; sha256="0y4qgypk04qn2ni7n30fqjvmcmbr5af33pvzpkk8g459vxp4ai9n"; depends=[SummarizedExperiment]; }; + tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.28.0"; sha256="12r9gm491v4srz6xa9mhwlj3r6iv51qd63f9jy29wc8cr4j4zzr1"; depends=[]; }; + tinesath1probe = derive2 { name="tinesath1probe"; version="1.28.0"; sha256="0k8yalkdj0dpwyshi4dhg7nff1wxbjwpxqfkckyp66xhjw0wacga"; depends=[AnnotationDbi]; }; + tissueTreg = derive2 { name="tissueTreg"; version="1.10.0"; sha256="0qwc7i8az7dk20r37kwaw9gmqj72xq8aqw0z65c20k1hb8nl10gd"; depends=[]; }; + tofsimsData = derive2 { name="tofsimsData"; version="1.18.0"; sha256="0g9gy50waj0v0qjpbyz1vrx8i60r7xsd5lrnd1acpgwkz72f60lg"; depends=[]; }; + topdownrdata = derive2 { name="topdownrdata"; version="1.12.0"; sha256="1g3mr37s7a3brmc97smkm2sl4lirx6yalb8dbfnwfzf5ccwbrp2h"; depends=[topdownr]; }; + tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.28.0"; sha256="0z0fkm33siaq3h6nbjwa0dici1r0haghh8grvpsg60vn6hiifp7l"; depends=[Biobase]; }; + tximportData = derive2 { name="tximportData"; version="1.18.0"; sha256="0warrg8381k22gadh74lzbigfz4ccr4h5b6mb34ny25hypf9zpsf"; depends=[]; }; + vulcandata = derive2 { name="vulcandata"; version="1.12.0"; sha256="0iwmjdrwqnjdwb3dhcspn539vy30w74rh1qd4yhwh23iilrikhvp"; depends=[]; }; + waveTilingData = derive2 { name="waveTilingData"; version="1.26.0"; sha256="0mhav14kjqcjp381wb5ghmxqm0ad0krjk42c1jsqdi1jmqf9bg27"; depends=[]; }; + yeastCC = derive2 { name="yeastCC"; version="1.30.0"; sha256="1vxa6r1kplg5drj698alr5s58gfj98hcf92vklvvayn1hshl793v"; depends=[Biobase]; }; + yeastExpData = derive2 { name="yeastExpData"; version="0.36.0"; sha256="1yc3h3lap8ih2qampq7f178rb7v5n8bz7i3wlf415zqn5cmn1vgc"; depends=[graph]; }; + yeastGSData = derive2 { name="yeastGSData"; version="0.28.0"; sha256="0s8hxyhbs5px9k5lhm3snaw3xiz2h8328fgxaacacnk2hwn742gv"; depends=[]; }; + yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.26.0"; sha256="0dnp3zbf2hj736jwjhmqdx0lq0pxl9ysx8xbzxzarqhh55bbnbip"; depends=[]; }; + yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.28.0"; sha256="161ar7jhzqcrfihzrc8pxxh1vhvc3vp9a504gwkni028dqljm8gv"; depends=[]; }; + yri1kgv = derive2 { name="yri1kgv"; version="0.32.0"; sha256="0bamz28dp3pxad45qm26mvi1wxmvdsq69ndsiqayi4k2m4qxvl0y"; depends=[Biobase GGBase]; }; + yriMulti = derive2 { name="yriMulti"; version="0.19.0"; sha256="1n4wcz2vns9bshhnl55zwf6545qlyfl2hl8wis9nfwxq3rj1xqrv"; depends=[dsQTL GenomeInfoDb GenomicFiles GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment VariantAnnotation]; }; + zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.10.0"; sha256="1865ygc4rfk56hjpnamzwlgrc9axgn4zxk2jhlrfpajb50npxw0n"; depends=[]; }; } diff --git a/third_party/nixpkgs/pkgs/development/r-modules/bioc-packages.nix b/third_party/nixpkgs/pkgs/development/r-modules/bioc-packages.nix index 9d33a3cdc0..f1062de1e9 100644 --- a/third_party/nixpkgs/pkgs/development/r-modules/bioc-packages.nix +++ b/third_party/nixpkgs/pkgs/development/r-modules/bioc-packages.nix @@ -4,1884 +4,1934 @@ # Rscript generate-r-packages.R bioc >new && mv new bioc-packages.nix { self, derive }: -let derive2 = derive { biocVersion = "3.11"; }; +let derive2 = derive { biocVersion = "3.12"; }; in with self; { - ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.18.0"; sha256="09ihbgxrhpcz2q7svldhm710a0yrhiqk9p0q0myv11c2w50ymwkw"; depends=[ABAData data_table GOfuncR gplots gtools Rcpp]; }; - ABSSeq = derive2 { name="ABSSeq"; version="1.42.0"; sha256="1c31cnwgipz5cwws6xfwy9rrsgg0prr9jyxhypcddqxcbp02mby5"; depends=[limma locfit]; }; - ABarray = derive2 { name="ABarray"; version="1.56.0"; sha256="0csvwlx3yi6irv01wx057sgcs0ygrik8x6348bbrcb2js0525zqi"; depends=[Biobase multtest]; }; - ACE = derive2 { name="ACE"; version="1.6.0"; sha256="1dhpz5x2bcdxfvcdm06z8rrknw3fry89jqp2zyi5x7v30r7fascf"; depends=[Biobase GenomicRanges ggplot2 QDNAseq]; }; - ACME = derive2 { name="ACME"; version="2.44.0"; sha256="0hsfi1xmdp6kxv4vpacy8awwj2mils7avfqx418s2fwh6ms0l2a9"; depends=[Biobase BiocGenerics]; }; - ADAM = derive2 { name="ADAM"; version="1.4.0"; sha256="1r702walyspqad5xr1qf5xjifszlmgqqac4qbvz3qg1zcgc9l17w"; depends=[dplyr DT GO_db KEGGREST knitr pbapply Rcpp stringr SummarizedExperiment]; }; - ADAMgui = derive2 { name="ADAMgui"; version="1.4.0"; sha256="05apdy8r16r9j42wd43y67206ysmi2qhyayyc9v1adnxdsx5jiw0"; depends=[ADAM colorRamps data_table dplyr DT ggplot2 ggpubr ggrepel ggsignif GO_db gridExtra knitr RColorBrewer reshape2 shiny shinyjs stringi stringr testthat varhandle]; }; - ADaCGH2 = derive2 { name="ADaCGH2"; version="2.28.1"; sha256="0k040bgb2j1wjlsi51m0pj5jfsb9qnqf297a5hjv46kga08w77af"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; - AGDEX = derive2 { name="AGDEX"; version="1.36.0"; sha256="1n08v7x7fgqyr79dmc5fkbcl6bgd1gjfx61hpm2ixp2px8b609ic"; depends=[Biobase GSEABase]; }; - AIMS = derive2 { name="AIMS"; version="1.20.0"; sha256="024hd1p37ccmfvvd5saa5qa531mb6rp90glzmd1scibz6hg4jg1g"; depends=[Biobase e1071]; }; - ALDEx2 = derive2 { name="ALDEx2"; version="1.20.0"; sha256="1cns8gdgcic6whry6b3hjlzhhfnrwjd4n4d1ijr3yaamp010rhph"; depends=[BiocParallel GenomicRanges IRanges multtest S4Vectors SummarizedExperiment zCompositions]; }; - ALPS = derive2 { name="ALPS"; version="1.2.0"; sha256="0q4ya4nqzpi57amwyyj3fghdqf8q8ccxgf001na1dy6v15xjd9pv"; depends=[assertthat BiocParallel ChIPseeker corrplot data_table dplyr genefilter GenomicRanges GGally gghalves ggplot2 ggseqlogo Gviz magrittr org_Hs_eg_db plyr reshape2 rtracklayer stringr tibble tidyr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - AMARETTO = derive2 { name="AMARETTO"; version="1.4.0"; sha256="1cm0v59ihdxbc36sbxhc02vk3sz0wka6swi62scbskpdjxrzvsig"; depends=[BiocFileCache callr circlize ComplexHeatmap curatedTCGAData doParallel dplyr DT foreach ggplot2 glmnet gridExtra httr impute knitr limma Matrix matrixStats MultiAssayExperiment Rcpp readr reshape2 rmarkdown tibble]; }; - AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.14.0"; sha256="1cbj2w8dvvqslhg600gh32pi3ayjcsz2zizr9gs2jmj2xx9bn3df"; depends=[]; }; - ANF = derive2 { name="ANF"; version="1.10.0"; sha256="1ij1f3bba57vqdx19aij6ac4y1hnakqgvz2qlzbibrw7caq3n8ir"; depends=[Biobase igraph MASS RColorBrewer survival]; }; - APAlyzer = derive2 { name="APAlyzer"; version="1.2.0"; sha256="0fr2zx1liyj93ky7yl30ym8kay32rrng89p6yjrakkgbsrg8p1sx"; depends=[DESeq dplyr ensembldb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel repmis Rsubread rtracklayer SummarizedExperiment tidyr VariantAnnotation]; }; - ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.28.0"; sha256="0zhhvr051fmh6g0bqrl525mkf094j1jnc57j201jlzmvdpkydlpv"; depends=[ARRmData]; }; - ASAFE = derive2 { name="ASAFE"; version="1.14.0"; sha256="0n8dza7bq9fw1m6v48zbh7rncl84372z38s5ypphph2x7vhiwccl"; depends=[]; }; - ASEB = derive2 { name="ASEB"; version="1.32.0"; sha256="0q0wvravky4h1gg74aqk9rrg2lr92wnkhf8dgxcdwya02mgigg8l"; depends=[]; }; - ASGSCA = derive2 { name="ASGSCA"; version="1.22.0"; sha256="0zsj14ija2ns6vajszjjwcl2hbz0m182vgzgf5gbwrijns4ky091"; depends=[MASS Matrix]; }; - ASICS = derive2 { name="ASICS"; version="2.4.3"; sha256="03lfmxcw3188b0xaycfp78dvzcm3xkayniipicmsnw5vs2ch0dz0"; depends=[BiocParallel ggplot2 gridExtra Matrix mvtnorm PepsNMR plyr quadprog ropls SummarizedExperiment zoo]; }; - ASSET = derive2 { name="ASSET"; version="2.6.0"; sha256="0p20z3d4wh84pk75i1avcs4fz7y59rn2zbzqq6hb3m5x7kb97x2c"; depends=[MASS msm rmeta]; }; - ASSIGN = derive2 { name="ASSIGN"; version="1.24.0"; sha256="1qspirfdmqgh2lxba5xgny4qf12mc1wkbxbx7dbdp2r4balbca1h"; depends=[ggplot2 gplots msm Rlab sva yaml]; }; - ASpediaFI = derive2 { name="ASpediaFI"; version="1.2.0"; sha256="10k8cj6klbxidhrxp2ms059k5aacbgmgz2psp7dx82agwssxi3si"; depends=[BiocParallel biomaRt dplyr DRaWR e1071 fgsea GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz igraph IRanges IVAS limma Matrix mGSZ reshape2 ROCR Rsamtools rtracklayer S4Vectors scales SummarizedExperiment]; }; - ASpli = derive2 { name="ASpli"; version="1.14.0"; sha256="0lbi8jmkbl8jrf6i6xraqk419k7jlgpym3hj87jvr1ws3jp7yxrl"; depends=[AnnotationDbi BiocGenerics BiocStyle edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rsamtools S4Vectors]; }; - ATACseqQC = derive2 { name="ATACseqQC"; version="1.12.5"; sha256="1103daz82k97vzmxjmf7jwm2nd3w8i0jwplrsi9996bkih11qwbf"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno edgeR GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges KernSmooth limma motifStack preseqR randomForest Rsamtools rtracklayer S4Vectors]; }; - AUCell = derive2 { name="AUCell"; version="1.10.0"; sha256="0fgqkgjhf92vkljkwn44lm8cjvzq1lvk80nk6xhsp5q6s5isbmns"; depends=[BiocGenerics data_table GSEABase mixtools R_utils S4Vectors shiny SummarizedExperiment]; }; - AWFisher = derive2 { name="AWFisher"; version="1.2.0"; sha256="0ay1pv299akm9nbqhsw1s638c0wh15kgn3zc3qrwlivi9pzfa6qy"; depends=[edgeR limma]; }; - AffiXcan = derive2 { name="AffiXcan"; version="1.6.0"; sha256="0073z6waxg6bba1p4ks5cqilyywrm5c7cv6ggjpqg3msz4f2y3y8"; depends=[BiocParallel crayon MultiAssayExperiment SummarizedExperiment]; }; - AffyCompatible = derive2 { name="AffyCompatible"; version="1.48.0"; sha256="0394sr4spafhfypjsafwjr0y0zsgv52ajdcyvsmkdk7375898lqd"; depends=[Biostrings RCurl XML]; }; - AffyExpress = derive2 { name="AffyExpress"; version="1.54.0"; sha256="1bby64wzk1nk1j2q2qdv9gi19hajkvlpyvblrzsrcr6zvdlyp5b8"; depends=[affy limma]; }; - AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.34.0"; sha256="046r90brgh141q8a8jaimnya5mlmil0bvwmcv8l3pz7w5lflpmgq"; depends=[affy]; }; - AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.38.0"; sha256="0vdcql0yrxgkbzdpyfcprsb8vk00j9gls598drcxz2dqvrbgjjfr"; depends=[affy affycoretools Biobase limma preprocessCore]; }; - AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.26.0"; sha256="0irn4xdlvazdkv0055f45693y6zvqaz7j3vml5xscnh45ls6vmqr"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; - AlphaBeta = derive2 { name="AlphaBeta"; version="1.2.3"; sha256="0cc893ld3w9va793261ca49852b12ppzhl366lasp9maza3m6vsj"; depends=[BiocParallel data_table dplyr expm ggplot2 gtools igraph optimx plotly stringr]; }; - AnVIL = derive2 { name="AnVIL"; version="1.0.3"; sha256="1vfy4ygjxljhq0knhniq4zdyimh9351b5dynx9czclvq9b3jlilz"; depends=[BiocManager curl dplyr futile_logger httr jsonlite rapiclient tibble]; }; - AnalysisPageServer = derive2 { name="AnalysisPageServer"; version="1.21.0"; sha256="0p5yy5fljkqix7q8yp0pzb6f1xvp9xyhafqidw0j7k8slbak49nk"; depends=[Biobase graph log4r rjson]; }; - Anaquin = derive2 { name="Anaquin"; version="2.12.0"; sha256="1ll1mf9wpb8b61xwk4lxczxalbrxn5dxcnv4gia277bjzrnva2hf"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; }; - AneuFinder = derive2 { name="AneuFinder"; version="1.16.0"; sha256="0ii085zd244p3v0ai2q7yvf0mynvf5v3n5zxmbznifs9ij7nzsz7"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel ecp foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; }; - AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.50.3"; sha256="0qcxfn4pvaksna0nvxr74ysn2wzaxn732pkhd6ffrj8pwhkhy5p3"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; }; - AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.12.0"; sha256="18kh1xrhpwb48s1qj4f1v8af3jmw49pnbp5afi2myn9894hxg0cs"; depends=[GenomicRanges lazyeval]; }; - AnnotationForge = derive2 { name="AnnotationForge"; version="1.30.1"; sha256="1a2155jxbwc6qr3dcyvp850grhdr7czc7bs3s87ff4sgdl0jp3jw"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; - AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.38.0"; sha256="1yfsxzn7s1nlc3xz2yj39j6hmdfapc9qj9h0cd71gkaxj53ial7d"; depends=[AnnotationDbi DBI]; }; - AnnotationHub = derive2 { name="AnnotationHub"; version="2.20.2"; sha256="04bz91m2wx1zm61rvpr0syyklz232fw74wrl73d965wi3x8fyda5"; depends=[AnnotationDbi BiocFileCache BiocGenerics BiocManager BiocVersion curl dplyr httr interactiveDisplayBase rappdirs RSQLite S4Vectors yaml]; }; - AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.18.1"; sha256="1dmfid0wps0iy6snjb8l7ydby0k0x505slbv0sqia69y9kidggmv"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocManager biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite OrganismDbi rBiopaxParser RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; - ArrayExpress = derive2 { name="ArrayExpress"; version="1.48.0"; sha256="0n8x1j4mb696lzmdl4qxjqrnxq01r8jd0jd20ykq1ifvknqfjsza"; depends=[Biobase limma oligo XML]; }; - ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.38.0"; sha256="0p9w5bwz4dp3zav9q2llkxm63i1bjrkcshil54ykzmdm3yxb64ry"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer Rhtslib rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; - ArrayTV = derive2 { name="ArrayTV"; version="1.25.0"; sha256="16g862nizanjppjnyil6yv8r008qksvhxnydm4scc5q65bbnq6p4"; depends=[DNAcopy foreach IRanges oligoClasses S4Vectors]; }; - ArrayTools = derive2 { name="ArrayTools"; version="1.48.0"; sha256="1hm3sjlc6dqbq0l3sxbv4nns44nwcbf3vqachaf8rsch9jgj3iln"; depends=[affy Biobase limma xtable]; }; - AssessORF = derive2 { name="AssessORF"; version="1.6.0"; sha256="0nqjkidyhka24dfwmyvms21niryffj500s1ar4qy7knicly1vczc"; depends=[Biostrings DECIPHER GenomicRanges IRanges]; }; - Autotuner = derive2 { name="Autotuner"; version="1.2.0"; sha256="02scdvvzcmih4zq1kvpwaajjmvwyqa7qqfkqjfkkncgx695pmci4"; depends=[assertthat Biobase cluster entropy MSnbase mzR RColorBrewer scales]; }; - BAC = derive2 { name="BAC"; version="1.48.0"; sha256="0342ms5mm9gj2zip10qk3313cxlvq7d9dadxbgbzpdw42bvyd20n"; depends=[]; }; - BADER = derive2 { name="BADER"; version="1.26.0"; sha256="0s1ycn9rip76p14g6l53q8jxbifnsmc8dhadqldaz881mqihv6ad"; depends=[]; }; - BAGS = derive2 { name="BAGS"; version="2.28.0"; sha256="1fky1h0cx2nk1akq09bf49b40yvh27v66mqczqsvs2p0pw487m7y"; depends=[Biobase breastCancerVDX]; }; - BANDITS = derive2 { name="BANDITS"; version="1.4.1"; sha256="080yaqpg6bkhz8azsrwbv19zfymfg2hi2x5p9hjy9b4vha0csbhd"; depends=[BiocParallel data_table doParallel doRNG DRIMSeq foreach ggplot2 MASS R_utils Rcpp RcppArmadillo]; }; - BASiCS = derive2 { name="BASiCS"; version="2.0.0"; sha256="1km2s9b35h2ypdixmyy4xscjl44dkv0q2qd69dvs5cci5nanb2g4"; depends=[assertthat Biobase BiocGenerics coda cowplot ggExtra ggplot2 hexbin KernSmooth MASS Matrix matrixStats Rcpp RcppArmadillo reshape2 S4Vectors scran SingleCellExperiment SummarizedExperiment viridis]; }; - BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.18.0"; sha256="0dwfsp10hm5s1mgcjsc75kqvmw828x86qs7glav9h8cj6fxkjxsh"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; - BCRANK = derive2 { name="BCRANK"; version="1.50.0"; sha256="1mbqp2n1g0h3cj58a5vndcsvvmsg2ivx2gcp300dqhjwbvhzbz47"; depends=[Biostrings]; }; - BDMMAcorrect = derive2 { name="BDMMAcorrect"; version="1.6.0"; sha256="02hamvyp44y0jgyvs72bjkics6wavfsz6a9q2q4d4i8w08fhj1pm"; depends=[ape ellipse ggplot2 Rcpp RcppArmadillo RcppEigen SummarizedExperiment vegan]; }; - BEARscc = derive2 { name="BEARscc"; version="1.8.1"; sha256="0izzczz576m5mprpzay88b11sqd9alsd6a30r85z7zj3kqsl2yvx"; depends=[data_table ggplot2 SingleCellExperiment]; }; - BEAT = derive2 { name="BEAT"; version="1.26.0"; sha256="1isda2bglylgsk388vg6mc1iwhwc1vp5il8c0g2085340wifa8l7"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; - BEclear = derive2 { name="BEclear"; version="2.4.0"; sha256="01v0mzp3frahqn235m62glmr9bjli7pmzlwjw7m3m40m9xcr45ha"; depends=[abind BiocParallel data_table futile_logger Matrix outliers Rcpp Rdpack]; }; - BGmix = derive2 { name="BGmix"; version="1.48.0"; sha256="1pfi3hinjn6ymikadgj8dqm59h7mapf01wj86dbbvf8y1xqp8y8n"; depends=[KernSmooth]; }; - BHC = derive2 { name="BHC"; version="1.40.0"; sha256="06milqjg2nl3ra47sxi7a2p2d3mbrx3wk168pqgimvs8snldd2xr"; depends=[]; }; - BLMA = derive2 { name="BLMA"; version="1.12.0"; sha256="19ndm2cp6xp5mdydqv58klbj8aijkrb6qrfh17v7qcxjjfxhq3l3"; depends=[Biobase graph GSA limma PADOG ROntoTools]; }; - BPRMeth = derive2 { name="BPRMeth"; version="1.14.1"; sha256="1sha7gbvckd7li9vc804w1lydp1jg735kz0a5sh5fzi3wzs7rjqk"; depends=[assertthat BiocStyle cowplot data_table doParallel e1071 earth foreach GenomicRanges ggplot2 IRanges kernlab magrittr MASS matrixcalc mvtnorm randomForest Rcpp RcppArmadillo S4Vectors truncnorm]; }; - BRAIN = derive2 { name="BRAIN"; version="1.34.0"; sha256="1xk955fq92rrgiccbxps34mc56xl8dy9yyc4ah62lhhxccxwf84c"; depends=[Biostrings lattice PolynomF]; }; - BRGenomics = derive2 { name="BRGenomics"; version="1.0.3"; sha256="1q0kay73f1llhkfcfsh45i9bcbbp2r7br60fsi6rahq1as3xp3p5"; depends=[DESeq2 GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - BSgenome = derive2 { name="BSgenome"; version="1.56.0"; sha256="1jw8r1qm9fpg2s1cw2y4np243jjxm65j2xdy2785h8fc1b02msf6"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges matrixStats Rsamtools rtracklayer S4Vectors XVector]; }; - BUMHMM = derive2 { name="BUMHMM"; version="1.12.0"; sha256="1baisaavlyrg83gqyzh0p0ls0bvq6darjs14ah9vpjdl7w50ngsj"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; }; - BUS = derive2 { name="BUS"; version="1.44.0"; sha256="0wcdjirgkc5d3xhwfjn8mnwv7aj3cac1sp7zh54k762j13jr794r"; depends=[infotheo minet]; }; - BUScorrect = derive2 { name="BUScorrect"; version="1.6.0"; sha256="0dk27psh372v0jnksf0xq2vmzc5fv26jfd9c31xbxlc0frvcgbsn"; depends=[gplots SummarizedExperiment]; }; - BUSpaRse = derive2 { name="BUSpaRse"; version="1.2.2"; sha256="031wj81p9arlrmz47qdmjc20srvnpinvd275s1g6acqq29hhk08k"; depends=[AnnotationDbi AnnotationFilter BH BiocGenerics biomaRt Biostrings BSgenome dplyr ensembldb GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr Matrix plyranges Rcpp RcppArmadillo RcppProgress S4Vectors stringr tibble tidyr zeallot]; }; - BaalChIP = derive2 { name="BaalChIP"; version="1.14.0"; sha256="00jkgkz7f4dnr31565yrwg6pjy80wr1xlj65z8ljirnxjpvr2zad"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; }; - BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.16.0"; sha256="113l9zz2a5dlwlv72hxdm6bwxqjqv7zdybnlgwiwdbc08mziy48n"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; - BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.32.0"; sha256="0c5hzf56q7nsiz316ldbafn0gg829ww6037i2miy4gprkj6s3f33"; depends=[RCurl RJSONIO]; }; - Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.24.0"; sha256="08sqiqxyc1cadwsp30sqbf9hwy45bcscf8cpaj8zp5llrbjlwhyy"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; - BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.16.0"; sha256="1f4la089chpypj1lhsazgzb3010swadk4xmaz403k8isj9winc0h"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; }; - BatchQC = derive2 { name="BatchQC"; version="1.16.3"; sha256="1cc5a0wy6na5nb9zbbizl727biq4r35s1nk5w2xkan9rsgwicp47"; depends=[corpcor ggvis gplots heatmaply knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; - BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.14.0"; sha256="0ndn6v8j526dx66j038d09jjlphx1gcdr1jbd8d0ybzqnv51zlxm"; depends=[Biobase]; }; - BayesPeak = derive2 { name="BayesPeak"; version="1.39.0"; sha256="1qzfvxp5jsp8zv9gdglmz9mf4xjl2ck4wjz2lngnjrnlxb9v6y4g"; depends=[IRanges]; }; - BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.40.0"; sha256="1k05fizqvdj4z4snp170mzj2vnaim2jy49k7wbv31fkin2xbf4bb"; depends=[]; }; - BgeeCall = derive2 { name="BgeeCall"; version="1.4.1"; sha256="1xkb5r4bhyzr5zm2zdh80ag5qymyh3pknx5nc6c68iz387rs0l09"; depends=[biomaRt Biostrings GenomicFeatures jsonlite rhdf5 rtracklayer tximport]; }; - BgeeDB = derive2 { name="BgeeDB"; version="2.14.5"; sha256="00xinj0qg83jlcd3a95xm5dwdhw5v9h26rax0ws4ngw5sc00q8fm"; depends=[Biobase curl data_table digest dplyr graph RCurl RSQLite tidyr topGO]; }; - BiFET = derive2 { name="BiFET"; version="1.8.0"; sha256="1v2dshs09iy2glzq0vwxmr83x867j844i1ixsfcamvfq33fwbbr5"; depends=[GenomicRanges poibin]; }; - BiGGR = derive2 { name="BiGGR"; version="1.24.0"; sha256="05afi6hsh1dv6lc6l0dfhvvi8k34wyzf1k1jimam7a6pbrhyy5dk"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; }; - BiRewire = derive2 { name="BiRewire"; version="3.20.0"; sha256="0y7jb1abnik2y4ivpyqrgfl77rml6fhz88isd54l646ghslwxj0g"; depends=[igraph Matrix slam tsne]; }; - BiSeq = derive2 { name="BiSeq"; version="1.28.0"; sha256="1hswsmd16hwz8h7nchbm0a8z9abs8cqaxdb4nv1108wd0220fc89"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; - BicARE = derive2 { name="BicARE"; version="1.46.0"; sha256="0llckbl3l26lf6wgjg7rxs8k1yrk043vvdhnkc6ncg33sydj383y"; depends=[Biobase GSEABase multtest]; }; - BioCor = derive2 { name="BioCor"; version="1.12.0"; sha256="1xghclfqv8d23g72g8914br5zjx4sz9zihzczwwmpl15lghpnqwy"; depends=[BiocParallel GSEABase Matrix]; }; - BioMM = derive2 { name="BioMM"; version="1.4.0"; sha256="1h78576qcxjv86radh5xsrf3h3zzppsig159rw9xmk5xb54aw3df"; depends=[BiocParallel CMplot e1071 ggplot2 glmnet lattice nsprcomp pROC ranger rms variancePartition vioplot]; }; - BioMVCClass = derive2 { name="BioMVCClass"; version="1.56.0"; sha256="10d4m8ap54j85asdz5nzaz7kh1013j2smsgg2vg6llnf2znzkf58"; depends=[Biobase graph MVCClass Rgraphviz]; }; - BioNet = derive2 { name="BioNet"; version="1.47.0"; sha256="0v036i60gmff3mz1fvx2fpnb4yfj2kfp0x9fcwcbml0a3jiybad7"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; - BioNetStat = derive2 { name="BioNetStat"; version="1.8.4"; sha256="1h2bjyjcci08vm7706krrmja9dsr38aivxkgsxi7lkw7xk3j1q1j"; depends=[BiocParallel DT ggplot2 Hmisc igraph knitr pathview pheatmap plyr psych RColorBrewer RJSONIO shiny shinyBS whisker yaml]; }; - BioQC = derive2 { name="BioQC"; version="1.16.0"; sha256="1h9263ixkj4k8mjhhd66s0n933xs9w6mcsvxcpscbyn224vf2sfj"; depends=[Biobase edgeR Rcpp]; }; - BioSeqClass = derive2 { name="BioSeqClass"; version="1.45.0"; sha256="0f1ahxr9aa9iqcp166vldyqbmdzpkybszlyiwwp6h764zmf15s0g"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; }; - BioTIP = derive2 { name="BioTIP"; version="1.2.0"; sha256="07s90lb78sw7kp4sbhi9x9vww3bm2jalddwcdxrif7kmpvb5raqq"; depends=[cluster GenomicRanges Hmisc igraph MASS psych stringr]; }; - Biobase = derive2 { name="Biobase"; version="2.48.0"; sha256="13p3kgnxm7hbn8cy289kbhaiyfa6rxx7l1pbvajwqzbay3cxznqp"; depends=[BiocGenerics]; }; - BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.50.0"; sha256="0fadck1dk1zavpn9yrcwx6zgfi18fw5xfs8svgzipns6bq41j8ix"; depends=[Biobase]; }; - BiocCheck = derive2 { name="BiocCheck"; version="1.24.0"; sha256="1p9ys18sn1crxw1iac2jdgqvwpb5hjd9nfxx0qn0ncrv0b550mny"; depends=[BiocManager biocViews codetools graph httr knitr optparse stringdist]; }; - BiocDockerManager = derive2 { name="BiocDockerManager"; version="1.0.1"; sha256="0c9h2w1ds82vk3sj50j65xa0j1007la39s5jhc3kpzw9hw5dsmky"; depends=[dplyr httr readr whisker]; }; - BiocFileCache = derive2 { name="BiocFileCache"; version="1.12.1"; sha256="02yayjyliaqxcwqa0n2ccmsfflskqzf0gvdibh2r3nz5bi66imkf"; depends=[curl DBI dbplyr dplyr httr rappdirs RSQLite]; }; - BiocGenerics = derive2 { name="BiocGenerics"; version="0.34.0"; sha256="15nvqyh2gx5zkn1krbs5c4rhw5642bijdfsf2rgic70gzr05cksk"; depends=[]; }; - BiocNeighbors = derive2 { name="BiocNeighbors"; version="1.6.0"; sha256="14cyyrwxi82xm5wy6bb1176zg322ll67wjrw9vvi4fhfs1k4wqxy"; depends=[BiocParallel Matrix Rcpp RcppAnnoy RcppHNSW S4Vectors]; }; - BiocOncoTK = derive2 { name="BiocOncoTK"; version="1.8.0"; sha256="021qzygfwdnd3naz1iqq01zr3zxv3k7wm1lklik24vc7axshxbmk"; depends=[bigrquery car ComplexHeatmap curatedTCGAData DBI dplyr DT GenomicFeatures GenomicRanges ggplot2 ggpubr graph httr IRanges magrittr plyr Rgraphviz rjson S4Vectors scales shiny SummarizedExperiment]; }; - BiocParallel = derive2 { name="BiocParallel"; version="1.22.0"; sha256="1lsg5xm5j3ly5k60fidzhkgqc9jgscyfkqngjvd9qp6yfzvsb82g"; depends=[BH futile_logger snow]; }; - BiocPkgTools = derive2 { name="BiocPkgTools"; version="1.6.0"; sha256="0l5fvi1m4834n4h0iswbap135s9mpaiabw9czzn1r72ssz86vrcr"; depends=[BiocFileCache BiocManager biocViews dplyr DT gh graph htmltools htmlwidgets httr igraph jsonlite magrittr rappdirs RBGL readr rex rlang rvest stringr tibble tidyr tidyselect xml2]; }; - BiocSet = derive2 { name="BiocSet"; version="1.2.2"; sha256="041hq3rp0kv7kjwcjjrksk8lw3sj6j1v3wdcr8z611k0g0z6p0cj"; depends=[AnnotationDbi dplyr KEGGREST plyr rlang rtracklayer tibble]; }; - BiocSingular = derive2 { name="BiocSingular"; version="1.4.0"; sha256="0368a9xj4cvicqkxmhh12ln46q9gnxla70s1dqrxxfn3b6k525ih"; depends=[beachmat BiocGenerics BiocParallel DelayedArray irlba Matrix Rcpp rsvd S4Vectors]; }; - BiocSklearn = derive2 { name="BiocSklearn"; version="1.10.3"; sha256="11vv7b10q2az0l60d572sriyf37xcvm65yaw4i6bwjx7cpy5ch2v"; depends=[basilisk knitr Rcpp reticulate SummarizedExperiment]; }; - BiocStyle = derive2 { name="BiocStyle"; version="2.16.1"; sha256="09sz2bnbfbj8wz16k0q8xrvag9fldxqyp5vbg9pvd9skh28hv7c7"; depends=[BiocManager bookdown knitr rmarkdown yaml]; }; - BiocVersion = derive2 { name="BiocVersion"; version="3.11.1"; sha256="1rrzx3dqds0jlj1bmjc744wiamb2hssbh3jfxz1s9jp4cvnwrpmz"; depends=[]; }; - BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.14.0"; sha256="0p9r71ql67sdlgd5pv118lhz8b85pr5y4ijfwzcy8wrr8jwlbddy"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown rstudioapi stringr usethis]; }; - Biostrings = derive2 { name="Biostrings"; version="2.56.0"; sha256="0imhfz7dg8b3l5qzipjranqqshdsg2x6zc49drlhn8sc7j40cvi8"; depends=[BiocGenerics crayon IRanges S4Vectors XVector]; }; - BitSeq = derive2 { name="BitSeq"; version="1.32.0"; sha256="012h07kr08y95p2swhnsm6f8cajnwps8vg598w93zs8pfxnrxkax"; depends=[IRanges Rhtslib Rsamtools S4Vectors]; }; - BrainStars = derive2 { name="BrainStars"; version="1.32.0"; sha256="0j6ak2c13y1xb5g8gq2xqs8rlvw9wc96v8kqx5vr0q0fqyp1xrg2"; depends=[Biobase RCurl RJSONIO]; }; - BridgeDbR = derive2 { name="BridgeDbR"; version="1.22.0"; sha256="16qfznf8bb6zdvl55vbm06vdqpv1f87s07s08zbj513vl8ccwzqh"; depends=[curl rJava]; }; - BrowserViz = derive2 { name="BrowserViz"; version="2.10.0"; sha256="0mrq8r6nvvardixgid6vr2vlzsxsmp1jb9m0g4h9x6kz4iwdr8h2"; depends=[BiocGenerics httpuv jsonlite]; }; - BubbleTree = derive2 { name="BubbleTree"; version="2.18.0"; sha256="01ja6lmqdla08v6lnafxw3ngibbr7aqvalc1h0mwlwnv7chrk0bv"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; }; - BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.52.0"; sha256="1p5mirc2scd4j1888zm641ajm35hlls27a07zgmvg5kbxv2pc6j7"; depends=[]; }; - BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.52.0"; sha256="0hdvlgyfdz50qmgg2i0axl4gaims3jyx8h5j9d8gj261wrig9jrk"; depends=[BufferedMatrix]; }; - CAFE = derive2 { name="CAFE"; version="1.24.0"; sha256="1d7wsvxpigjs8pkx5zj7kbc3m2rkagfc0nnmcmal4v5z4ryg39n8"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; - CAGEfightR = derive2 { name="CAGEfightR"; version="1.8.0"; sha256="17p9ivsz5014ya2vkfg7bpknn0jwc2zh2qqd27s70l14797d1gy0"; depends=[assertthat BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicInteractions GenomicRanges Gviz InteractionSet IRanges Matrix pryr rtracklayer S4Vectors SummarizedExperiment]; }; - CAGEr = derive2 { name="CAGEr"; version="1.30.3"; sha256="0xd2x5wfj84mlzzfams184ifsyq80jlj50jcih67x9pyhgdd1rwz"; depends=[beanplot BiocGenerics BiocParallel BSgenome data_table DelayedArray formula_tools GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges KernSmooth memoise MultiAssayExperiment plyr reshape Rsamtools rtracklayer S4Vectors som stringdist stringi SummarizedExperiment vegan VGAM]; }; - CAMERA = derive2 { name="CAMERA"; version="1.44.0"; sha256="007zcd795iwc7ywgly6l8835ayw64g58d4mkfg1w3afrc3gw29xy"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; - CAMTHC = derive2 { name="CAMTHC"; version="1.6.0"; sha256="12gnk89y1dsdpahma2n5b5g7zzda576b8zdrcl9dbawbhs9ccx87"; depends=[apcluster Biobase BiocParallel corpcor DMwR geometry NMF nnls pcaPP rJava SummarizedExperiment]; }; - CARNIVAL = derive2 { name="CARNIVAL"; version="1.0.0"; sha256="1i06kz12m3zm6y3zz8n572i89f1iirc7py0nz5d614829j7f79sr"; depends=[AnnotationDbi Category doParallel ggplot2 igraph lpSolve readr UniProt_ws viper]; }; - CATALYST = derive2 { name="CATALYST"; version="1.12.2"; sha256="1m6cqv0h75bzw3gd9dq72y4iyk8clp894an5dzws6gr5vcd1vl8j"; depends=[circlize ComplexHeatmap ConsensusClusterPlus cowplot data_table dplyr drc flowCore FlowSOM ggplot2 ggrepel ggridges gridExtra magrittr Matrix matrixStats nnls purrr RColorBrewer reshape2 Rtsne S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; }; - CAnD = derive2 { name="CAnD"; version="1.20.0"; sha256="1gh5l8bw6ilc0gq24sqgaghp7q54fx0834mzd837ppshz3bd9vkf"; depends=[ggplot2 reshape]; }; - CCPROMISE = derive2 { name="CCPROMISE"; version="1.14.0"; sha256="18zs0nrarzw5xfs3q2zknf81dcjphwmiqlfim5rlnz6icp53prrp"; depends=[Biobase CCP GSEABase PROMISE]; }; - CEMiTool = derive2 { name="CEMiTool"; version="1.12.2"; sha256="1wm69dyfkhr1rapvc73lfj4si8ff3snz8hgay6c7y8nwgkykk0pn"; depends=[clusterProfiler data_table dplyr DT fastcluster fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; }; - CFAssay = derive2 { name="CFAssay"; version="1.22.0"; sha256="0kdv5i6cm63yjai2xg25y1mq0728drwnqs8r9vx3k7djxrkx8ad7"; depends=[]; }; - CGEN = derive2 { name="CGEN"; version="3.23.0"; sha256="0m40xq2ixdkdhq4fpi8bw0p2y2p1vln40ly0iixjyl33z2zpyrrj"; depends=[mvtnorm survival]; }; - CGHbase = derive2 { name="CGHbase"; version="1.48.0"; sha256="0gfqqa9rs5hid53ihlky88qndgrwxxz0s6j7s505f660dd5nzlkf"; depends=[Biobase marray]; }; - CGHcall = derive2 { name="CGHcall"; version="2.50.0"; sha256="1dz6sag8khl18vkb97b5w6fk6k9s7s9xxnc467dd3bmhmajlmrrg"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; - CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.42.0"; sha256="0407h3dph05wj4wx6ysfar2gl39rzr9ks3pjvz98pjv7m1ink4hk"; depends=[Biobase CGHbase CGHcall]; }; - CGHregions = derive2 { name="CGHregions"; version="1.46.0"; sha256="1l2kl14g70yigqkxdhgvbrpa7a28fizmn24wh723zma6akg36n7j"; depends=[Biobase CGHbase]; }; - CHARGE = derive2 { name="CHARGE"; version="1.7.0"; sha256="12332d9a5f0vcj8rs0nh61n2hi1ihjipbdk3gwcq0adaacap1vg4"; depends=[cluster diptest factoextra FactoMineR GenomicRanges IRanges matrixStats plyr SummarizedExperiment]; }; - CHETAH = derive2 { name="CHETAH"; version="1.4.0"; sha256="1rkhgq34wxzqch1b5vgg0r1n9h0xz3qqmq088di4pnh5pccwg58g"; depends=[bioDist corrplot cowplot dendextend ggplot2 gplots pheatmap plotly reshape2 S4Vectors shiny SingleCellExperiment SummarizedExperiment]; }; - CHRONOS = derive2 { name="CHRONOS"; version="1.16.0"; sha256="0k037q0qdny93hqhzmb58smm2alppq4lkm4vg6aiykcsv14slpwh"; depends=[biomaRt circlize doParallel foreach graph igraph openxlsx RBGL RCurl XML]; }; - CINdex = derive2 { name="CINdex"; version="1.16.0"; sha256="0wirzhm542k8i02p2sygqs9misaxkymk660qzn7i13dc119yn8zg"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; - CMA = derive2 { name="CMA"; version="1.46.0"; sha256="0al1zbmc99gch3wyhdvjlk860vsb9zrwnkgv1s24fgx6pjg1180w"; depends=[Biobase]; }; - CNAnorm = derive2 { name="CNAnorm"; version="1.34.0"; sha256="18w4gfqpdpv4zca9ahbdx6lgbyzaphm336w394lk3mwll89zanm1"; depends=[DNAcopy]; }; - CNEr = derive2 { name="CNEr"; version="1.24.0"; sha256="0l2hmaanlzb2z967piv7bybv1sxgix5ywvqqsvlvag3mxda6y706"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; }; - CNORdt = derive2 { name="CNORdt"; version="1.30.0"; sha256="1lz25x67g3vy1s31sr3rgq0qcsp9km0wxjib3n2s18vq7xjhlqh2"; depends=[abind CellNOptR]; }; - CNORfeeder = derive2 { name="CNORfeeder"; version="1.28.0"; sha256="0bf5d3lzi596lj3x7mpjp43zw2vdnprfjg1anb8z5qzzk546vwhd"; depends=[CellNOptR graph]; }; - CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.30.0"; sha256="0x12kspgmmpp08k7z22bpih2ih4lzg58jl4rpmrhg6li19k66zm9"; depends=[CellNOptR nloptr]; }; - CNORode = derive2 { name="CNORode"; version="1.30.0"; sha256="0mc0skz87zw9xa0sfl27jdfzmvxqd4rdn8951qcwi34wi32f85qg"; depends=[CellNOptR genalg]; }; - CNTools = derive2 { name="CNTools"; version="1.44.0"; sha256="1npjk7j0nbj68cshas1d0xrz116jvanj5zpq3sxi72rymx7jpq87"; depends=[genefilter]; }; - CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.20.0"; sha256="18q281kkazv2gw02hlmklqp65xzf27ls24cxy5ihblc8c8jxnms2"; depends=[exomeCopy foreach GenomeInfoDb GenomicRanges ggplot2 gplots IRanges NOISeq openxlsx plyr reshape2 Rsamtools S4Vectors shiny shinyFiles shinyjs stringr testthat]; }; - CNVRanger = derive2 { name="CNVRanger"; version="1.4.3"; sha256="0f9sylaj0ydjygcgv8bhrfah1rd8022wd7fzkvm4v7s74rfj0gcy"; depends=[BiocParallel data_table edgeR GDSArray gdsfmt GenomeInfoDb GenomicRanges IRanges lattice limma plyr qqman RaggedExperiment rappdirs reshape2 S4Vectors SNPRelate SummarizedExperiment]; }; - CNVfilteR = derive2 { name="CNVfilteR"; version="1.2.0"; sha256="1sy63x1sh9n2hfx45w3sgnqlw0gzh4qd5qjaj0cz4shnlzm344w2"; depends=[assertthat Biostrings CopyNumberPlots GenomeInfoDb GenomicRanges IRanges karyoploteR pracma regioneR Rsamtools SummarizedExperiment VariantAnnotation]; }; - CNVrd2 = derive2 { name="CNVrd2"; version="1.26.0"; sha256="09ykzhkyyamlizi7w3hvqdbl37mps48pabgjgncwmzchg4wmsqlv"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; - CNVtools = derive2 { name="CNVtools"; version="1.81.0"; sha256="0692qqaymrhx510prqr2qpwnx2yaahxngg485dnsaqbjlkgbz5l4"; depends=[survival]; }; - COCOA = derive2 { name="COCOA"; version="2.2.1"; sha256="1cxa8j4yd9shdvy6ljpph97px1gafv0yflv3g6ijzq4z095xdzip"; depends=[Biobase BiocGenerics ComplexHeatmap data_table fitdistrplus GenomicRanges ggplot2 IRanges MIRA S4Vectors simpleCache tidyr]; }; - CODEX = derive2 { name="CODEX"; version="1.20.0"; sha256="1vgv9q0ijhj6l9llnp7464427gg8dfccg9w53brw3ky49x38fs5d"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; - COHCAP = derive2 { name="COHCAP"; version="1.34.1"; sha256="1r8lk6b4wqpxma1kdxlpb56fbxbycrinv1dazrq4i5c2ralc7gjc"; depends=[BH COHCAPanno gplots RColorBrewer Rcpp RcppArmadillo WriteXLS]; }; - COMPASS = derive2 { name="COMPASS"; version="1.26.0"; sha256="02fapj6xc254hvzcm3nv42xlxq1jiwca0mrgmzhxpibh24v7i5lv"; depends=[abind BiocStyle clue data_table dplyr knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang rmarkdown scales tidyr]; }; - CONFESS = derive2 { name="CONFESS"; version="1.16.0"; sha256="0xl41nc8az0dwn0ywnbriv32bxy65ppmbb1g4l5hbmnaqyas437m"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; - CORREP = derive2 { name="CORREP"; version="1.54.0"; sha256="0lz3ygjk1hx1d284jg364c317s7nzgsdjvj33s77av1y41vdjj39"; depends=[e1071]; }; - COSNet = derive2 { name="COSNet"; version="1.22.0"; sha256="1dyczgbnphhzxcc98qmfrqxgv3nql2rn0vnh5f5ypjhgpysg56yz"; depends=[]; }; - CRISPRseek = derive2 { name="CRISPRseek"; version="1.28.0"; sha256="0q3vsxq0997y95ym22wbdfp6xm214fxjcg4gzvgnm8y75qpm3dyi"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges S4Vectors seqinr]; }; - CRImage = derive2 { name="CRImage"; version="1.36.0"; sha256="0fp3fspfmjb50iz5sfyn3jpxw2chlrdyh21126v7r3bwdw31myfc"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; - CSAR = derive2 { name="CSAR"; version="1.40.0"; sha256="10d60ylbwzpczy9by3ba5x4z798zg4hyhma99aav2x4q79laq6rk"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - CSSP = derive2 { name="CSSP"; version="1.26.0"; sha256="089a0rmb8i9p1ay9mqyph865gni2fzr9sr18mdivnznxxxvd6v3n"; depends=[]; }; - CSSQ = derive2 { name="CSSQ"; version="1.0.5"; sha256="0vwhd2k86fnkvws8vafkz6mxchlchxicviqdmnlvwb516nslavlb"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - CancerInSilico = derive2 { name="CancerInSilico"; version="2.8.0"; sha256="1whhxsay42dcz8b0xrpd9r4i7x1ybk8x016y2sm8nk48g0p7xczy"; depends=[BH Rcpp]; }; - CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.30.0"; sha256="0vq4p5nkymzn4q37lpmkfc886r13za7pypl58nklkfhhj3d3241x"; depends=[AnnotationDbi limma qvalue]; }; - CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.14.0"; sha256="0hr3ilh64sv9rbx010bpw3bm20sbq6frp4za8fq0qh54cbj7hr69"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust SNFtool survival]; }; - Cardinal = derive2 { name="Cardinal"; version="2.6.0"; sha256="15l3ra6r45ppj49yapzrk9js92znnsfsvisvrdh8q177dvr9i64z"; depends=[Biobase BiocGenerics BiocParallel dplyr EBImage irlba lattice magrittr Matrix matter mclust nlme ProtGenerics S4Vectors signal sp viridisLite]; }; - Category = derive2 { name="Category"; version="2.54.0"; sha256="1grspdzk5a4vidnxwcd1jmy1vcn494aydsp3vydx235yv7iqac1b"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; }; - CausalR = derive2 { name="CausalR"; version="1.20.0"; sha256="189qvw32ih926k1fvhjb8bj0rfdmrijip5j8vsvx7v1mh7xk4kvx"; depends=[igraph]; }; - CeTF = derive2 { name="CeTF"; version="1.0.7"; sha256="13q5fzlvrfmdv75hdl2dk1vjgl503dnxrdjfr9yrf0zch8h5b51f"; depends=[circlize clusterProfiler ComplexHeatmap DESeq2 GenomicTools GenomicTools_fileHandler GGally ggnetwork ggplot2 ggpubr ggrepel igraph Matrix network Rcpp RcppArmadillo RCy3 S4Vectors SummarizedExperiment WebGestaltR]; }; - CellBench = derive2 { name="CellBench"; version="1.4.1"; sha256="0b854k76459gplbibc9dl9mmcspnn6cp2b0dipi6k7cm48vcv67x"; depends=[BiocFileCache BiocParallel dplyr glue lubridate magrittr memoise purrr rappdirs rlang SingleCellExperiment tibble tidyr tidyselect]; }; - CellMapper = derive2 { name="CellMapper"; version="1.14.0"; sha256="04rv1xr4kdz85s1178jcai1047f3ah67clargmxw3qzb49q999db"; depends=[S4Vectors]; }; - CellMixS = derive2 { name="CellMixS"; version="1.4.2"; sha256="0qi5mmhsbi9qw42v9qnphawqw5l5rpjn3gkskbj0450skgz6f712"; depends=[BiocGenerics BiocNeighbors BiocParallel cowplot dplyr ggplot2 ggridges kSamples magrittr purrr scater SingleCellExperiment SummarizedExperiment tidyr viridis]; }; - CellNOptR = derive2 { name="CellNOptR"; version="1.34.0"; sha256="16fs4baafwf3mg99386l3kgwzzpf5cqxv1ib3dsv0hldz8n95zkg"; depends=[ggplot2 graph hash igraph RBGL RCurl Rgraphviz stringi stringr XML]; }; - CellScore = derive2 { name="CellScore"; version="1.8.0"; sha256="15j8cgpvkvw6hyah6437lqrlqfspzdqs71v162s0sqmfk501b9g3"; depends=[Biobase gplots lsa RColorBrewer squash]; }; - CellTrails = derive2 { name="CellTrails"; version="1.6.1"; sha256="1gf5m553vgsh216s7dgg7dawlzkaibqwmmnd5ra31gj720f47ilh"; depends=[Biobase BiocGenerics cba dendextend dtw EnvStats ggplot2 ggrepel igraph maptree mgcv reshape2 Rtsne SingleCellExperiment SummarizedExperiment]; }; - CexoR = derive2 { name="CexoR"; version="1.26.0"; sha256="1vlb38msz8hc5xy3w9an3vlv70yxh8ryy0rshn4ghjamcbfiv9qz"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; - ChAMP = derive2 { name="ChAMP"; version="2.18.3"; sha256="1b5ndi5r404yg1dzr58bflzd3p8l317di1yb5hc48f6yk4fwysif"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel DT GenomicRanges ggplot2 globaltest goseq Hmisc Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva kpmt limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; }; - ChIC = derive2 { name="ChIC"; version="1.8.0"; sha256="1lc21gjw8g6plgbcv7m13wfd8lczmh1zdllfxah2cxzzvkdswgpv"; depends=[BiocGenerics caret caTools ChIC_data GenomicRanges IRanges progress S4Vectors spp]; }; - ChIPComp = derive2 { name="ChIPComp"; version="1.18.0"; sha256="0780kj9vbzdhf2jkfb1my8m58pcdwk6jqw6zfng82g46jias98cp"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; - ChIPQC = derive2 { name="ChIPQC"; version="1.24.1"; sha256="13znqva6xn2qn9c11kf3ghycb1hck0rzk300bp08zw64mk1nh6v5"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; - ChIPSeqSpike = derive2 { name="ChIPSeqSpike"; version="1.8.0"; sha256="0z57dmzfa2jjaxi3pz2yzfgkra5i8gbi50w579m35s1q3rrisyln"; depends=[BiocGenerics corrplot GenomicRanges ggplot2 IRanges LSD Rsamtools rtracklayer S4Vectors seqplots stringr]; }; - ChIPXpress = derive2 { name="ChIPXpress"; version="1.32.0"; sha256="0xb8p0ap0kmj53skp7bm151lmf6cdwlyv18jaji7lcsrvnni3ilm"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; - ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.10.0"; sha256="0wxq7w95gxvb9wjm2amh37hvnbsy1cikyzdh8aa7a21nr71jp8km"; depends=[BiocManager Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges RcppRoll ROCR rtracklayer S4Vectors]; }; - ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.12.0"; sha256="02rsf1rvm0p6dn18zq2a4hpvpd9m2i5rziyi4zm8j43qvs8xhafp"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; }; - ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.22.4"; sha256="0wxgjdikinkqj7jvs2725ak0291q6zhikyf1c93w8cngwvd9i1gq"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager biomaRt Biostrings BSgenome DBI DelayedArray ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GO_db graph idr IRanges limma matrixStats multtest RBGL regioneR Rsamtools rtracklayer S4Vectors seqinr SummarizedExperiment VennDiagram]; }; - ChIPseeker = derive2 { name="ChIPseeker"; version="1.24.0"; sha256="04lvw4bglab7vrhz5frn8vvp311dhr19ff2r97l1qharh22bnyq2"; depends=[AnnotationDbi BiocGenerics boot dplyr enrichplot GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - ChIPseqR = derive2 { name="ChIPseqR"; version="1.42.0"; sha256="1r60ia052wlkmvjlfwagfnnx4kzgmh91b8na3g7wn05fl708nyzl"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; - ChIPsim = derive2 { name="ChIPsim"; version="1.42.0"; sha256="12v77hzh9d5iz4byn80qlsssj5vgyhhmd0xfbcczjw1hv81iizxq"; depends=[Biostrings IRanges ShortRead XVector]; }; - ChemmineOB = derive2 { name="ChemmineOB"; version="1.26.0"; sha256="1507fqhdw3zm5yi8zg8wbvf2nymyvg72qwsj2m11q42xsy6czns2"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; - ChemmineR = derive2 { name="ChemmineR"; version="3.40.0"; sha256="0cna5xsqflvhlp2k47asxyv3w4ympmz2wy2cwjyzlal6936fjikf"; depends=[base64enc BH BiocGenerics DBI digest DT ggplot2 gridExtra png Rcpp RCurl rjson rsvg]; }; - Chicago = derive2 { name="Chicago"; version="1.16.1"; sha256="1jkkkh5nxmrbyzki111hyvv1yabwj3my4d7vqyzhqvq3iny3anys"; depends=[data_table Delaporte Hmisc MASS matrixStats]; }; - ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.42.0"; sha256="0zwqpsnl2zwibv0l4dqp28w3c2f53l73hz1vh0mcrg43lr7p2cx8"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; }; - CiteFuse = derive2 { name="CiteFuse"; version="1.0.0"; sha256="1arf69yk6zkijq0pinh8w3vgxp4qdg5bsc8f3s7417r95p998141"; depends=[cowplot dbscan ggplot2 ggraph ggridges gridExtra igraph Matrix mixtools pheatmap propr randomForest reshape2 rhdf5 rlang Rtsne S4Vectors scales scran SingleCellExperiment SNFtool SummarizedExperiment uwot]; }; - ClassifyR = derive2 { name="ClassifyR"; version="2.8.0"; sha256="1gdxj4gccbl8w82piyvkkg5dgwdjyqnbyy4rjxrxw8ngri0rrd6q"; depends=[BiocParallel locfit MultiAssayExperiment plyr S4Vectors]; }; - Clomial = derive2 { name="Clomial"; version="1.24.0"; sha256="0wgl5ys4csiphixl105sfn61vzphyvans4qsnl81x8hn9q34m85q"; depends=[matrixStats permute]; }; - Clonality = derive2 { name="Clonality"; version="1.36.0"; sha256="1y648saal9h3jfkgafb1r0n2g5ikn78cw0kv5q29181g378vvjjv"; depends=[DNAcopy]; }; - CluMSID = derive2 { name="CluMSID"; version="1.4.0"; sha256="0j4qfw32qyawama0b1vrc3s51jik5dgi46q1xxhxfcv6p40zkbxm"; depends=[ape Biobase dbscan GGally ggplot2 gplots MSnbase mzR network plotly RColorBrewer S4Vectors sna]; }; - ClusterJudge = derive2 { name="ClusterJudge"; version="1.10.0"; sha256="0gfy9153nr7wsjxp2w4n79bp6zm2wb49kvw0kg9zqmbla39v0m6j"; depends=[httr infotheo jsonlite lattice latticeExtra]; }; - ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.16.0"; sha256="04i1nqnm5npmsddbbswvf5w4v0299p9rb8b5vn83q0vpm09ls62q"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; - CoCiteStats = derive2 { name="CoCiteStats"; version="1.60.0"; sha256="1spf00zp8sd33i5v7b2yq3x49mx7xji05d69zhr719qayg76gyp4"; depends=[AnnotationDbi org_Hs_eg_db]; }; - CoGAPS = derive2 { name="CoGAPS"; version="3.8.0"; sha256="04x9phnx1awbikz7qd96z9q0m29cv0ylksshzw5b86sxccf3yzaf"; depends=[BiocParallel cluster gplots RColorBrewer Rcpp rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; }; - CoRegFlux = derive2 { name="CoRegFlux"; version="1.4.0"; sha256="1842156h0xbjz98i9402rawkxivq152ccaz3cwrf8p9c21315j1i"; depends=[CoRegNet sybil]; }; - CoRegNet = derive2 { name="CoRegNet"; version="1.26.0"; sha256="0d9byjgsrbjingi58zd8s7w2n1lcxyzd1irpcd6iaqxxawgqjaxn"; depends=[arules igraph shiny]; }; - CompGO = derive2 { name="CompGO"; version="1.24.0"; sha256="02f6ka4m1mz2mmms2g8d57g2rnb7g4gm8ax19i37nya9x3ggzjcr"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="2.4.3"; sha256="1gx0hzrkla92pgmfkrm2zp0ccnhizq6rs26zgzpi5x8a5lvghh5q"; depends=[circlize clue colorspace GetoptLong GlobalOptions png RColorBrewer]; }; - ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.52.0"; sha256="06gq3a95h0km1hzbx1za8q0l7kla3jdzvn6cnfz43ijx4n3dzzcq"; depends=[ALL Biobase cluster]; }; - CopyNumberPlots = derive2 { name="CopyNumberPlots"; version="1.4.0"; sha256="1jbawn0kdyh5jyxapw5d9yc49k8yx6ngx3hxfrm3gp2pxwpa3sgg"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges karyoploteR regioneR rhdf5 Rsamtools SummarizedExperiment VariantAnnotation]; }; - CopywriteR = derive2 { name="CopywriteR"; version="2.20.0"; sha256="0c36wpv0rygkbqpf3dwh5xmc3lr7p8lrdzsq2fbbpw04skl6i7m2"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; - CorMut = derive2 { name="CorMut"; version="1.29.0"; sha256="0jbmwwi1f7h2zm3irs5igqpzgs05khk1r3fy460wxj05f0g366gr"; depends=[igraph seqinr]; }; - CoreGx = derive2 { name="CoreGx"; version="1.0.2"; sha256="1p8v42ljh7y3iy5krjmvvf7cxl7z064inij19s30dfaahfv77x2a"; depends=[Biobase BiocParallel lsa piano S4Vectors SummarizedExperiment]; }; - Cormotif = derive2 { name="Cormotif"; version="1.34.0"; sha256="1wn8c7rrmmc1mamy1ya7bvpg24g47fr9q8xdddvnzwvbcbxiqpwf"; depends=[affy limma]; }; - CountClust = derive2 { name="CountClust"; version="1.16.0"; sha256="123lsadhi7ny5qkkgf543d3s6l22wm63s76y85z3ij5awgwzr9mf"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; }; - CoverageView = derive2 { name="CoverageView"; version="1.26.0"; sha256="1fcz7pkffz5l3jdxb9glji2zdmr6nx67h6vfpr2yi8n3slg2hrrj"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; - CrispRVariants = derive2 { name="CrispRVariants"; version="1.16.0"; sha256="0jlp7wdrl9ih77iya9kwjfr4vr84xdcxxg6dj8c7lk9bhd41r6xr"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; - CrossICC = derive2 { name="CrossICC"; version="1.2.0"; sha256="1ilfgmrpr85i0x6grhjlrb3gq74hnjlvsmz0af41ajvnz9mbh6s0"; depends=[Biobase cluster ConsensusClusterPlus data_table dplyr limma MASS MergeMaid]; }; - CytoDx = derive2 { name="CytoDx"; version="1.8.0"; sha256="052k8p47kdqvidw28qzp6x1g599crlx15wakz17ja6067drs5axx"; depends=[doParallel dplyr flowCore glmnet rpart rpart_plot]; }; - CytoML = derive2 { name="CytoML"; version="2.0.5"; sha256="174brv027mm90lydfg6hnhazwh8jy4vf6ial4hpsfalwa5jrz55n"; depends=[base64enc BH Biobase corpcor cytolib data_table dplyr flowCore flowWorkspace ggcyto graph jsonlite lattice openCyto plyr RBGL Rcpp RcppArmadillo RcppParallel Rgraphviz Rhdf5lib RProtoBufLib RUnit tibble XML xml2 yaml]; }; - DAMEfinder = derive2 { name="DAMEfinder"; version="1.0.3"; sha256="0wdcycgsd9zcjnagp3spbzy8dn20q3a1a21dw5f0rl3yllpk12s9"; depends=[BiocGenerics Biostrings bumphunter cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma plyr readr reshape2 Rsamtools S4Vectors stringr SummarizedExperiment VariantAnnotation]; }; - DAPAR = derive2 { name="DAPAR"; version="1.20.3"; sha256="1ndi82gk3mshccr9iyhlk6y9zxazgg5qvcby90w8kkhhiq34vi7v"; depends=[AnnotationDbi Cairo clusterProfiler cp4p DAPARdata doParallel dplyr factoextra FactoMineR foreach ggplot2 gplots graph highcharter igraph imp4p impute knitr lattice limma lme4 Matrix MSnbase norm openxlsx pcaMethods png preprocessCore RColorBrewer readxl reshape2 scales siggenes stringr tidyr tidyverse tmvtnorm vioplot visNetwork vsn]; }; - DART = derive2 { name="DART"; version="1.36.0"; sha256="1gjhhxyypaza598f51cvyn5564m5dgli6v3cl6rqmh9qzil482hv"; depends=[igraph]; }; - DBChIP = derive2 { name="DBChIP"; version="1.32.0"; sha256="16zzgbfnnvjissnzg8lqsy60kpivjwyfzh1zp7b4bhzmfw8awwqy"; depends=[DESeq edgeR]; }; - DChIPRep = derive2 { name="DChIPRep"; version="1.18.0"; sha256="0xpafzd8xdcqjnn4i8iv819240rnvi4wbwwlzn8kb76cdqn6299x"; depends=[assertthat ChIPpeakAnno DESeq2 fdrtool GenomicRanges ggplot2 plyr purrr reshape2 S4Vectors smoothmest soGGi SummarizedExperiment tidyr]; }; - DECIPHER = derive2 { name="DECIPHER"; version="2.16.1"; sha256="14pzhh98494ysnbs033p86hslwc2v172fj5161afrsvjskzbi1ay"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; - DEComplexDisease = derive2 { name="DEComplexDisease"; version="1.8.0"; sha256="0r794dsvwsirv5wgk4xrcndq45axnrvmlm4h8kv58zl9v2ydhyf2"; depends=[BiocParallel ComplexHeatmap DESeq2 edgeR Rcpp SummarizedExperiment]; }; - DEFormats = derive2 { name="DEFormats"; version="1.16.0"; sha256="174c54dlf4g620gmvvbycp5hkynpk68b4njw0n6h87dxw11ammfr"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges S4Vectors SummarizedExperiment]; }; - DEGraph = derive2 { name="DEGraph"; version="1.40.0"; sha256="0lxqmpdpdwp6fz3bc5gmsdrlsjm2123469qlf5bkf0agy084d04j"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; - DEGreport = derive2 { name="DEGreport"; version="1.24.1"; sha256="1zxh3pn7nqh5dc6c77gn5sbj8qihrl2i2w41frb9ji9c1mcphcqj"; depends=[Biobase BiocGenerics broom circlize cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggdendro ggplot2 ggrepel knitr lasso2 logging magrittr Nozzle_R1 psych RColorBrewer reshape rlang S4Vectors scales stringr SummarizedExperiment tibble tidyr]; }; - DEGseq = derive2 { name="DEGseq"; version="1.42.0"; sha256="1z5a60bk29dv0rwgzjvi2v7rlhhsqw8qc2fn3pkngbcxwmnapabi"; depends=[qvalue]; }; - DEP = derive2 { name="DEP"; version="1.10.0"; sha256="1zw4k65bp2fp9zbrarc5jm9s4dyiqhlb8hwmiwjv38gy4v5m0wwc"; depends=[assertthat circlize cluster ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; }; - DEScan2 = derive2 { name="DEScan2"; version="1.8.0"; sha256="0v8irww2k3rcxzx0sw2g6srbj3z0akmnmdrrv0pfv8x78v076rxg"; depends=[BiocGenerics BiocParallel ChIPpeakAnno data_table DelayedArray GenomeInfoDb GenomicAlignments GenomicRanges glue IRanges plyr Rcpp RcppArmadillo rtracklayer S4Vectors SummarizedExperiment]; }; - DESeq = derive2 { name="DESeq"; version="1.39.0"; sha256="047hph5aqmjnz1aqprziw0smdn5lf96hmwpnvqrxv1j2yfvcf3h1"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; }; - DESeq2 = derive2 { name="DESeq2"; version="1.28.1"; sha256="0xh12c2skr0bbv893p05gvbismkcnqw8zwh7yz4wmycgajfzg2pp"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; - DEWSeq = derive2 { name="DEWSeq"; version="1.2.0"; sha256="1my496mghbvpzd5gfw6x7arjj2v1svzvgma3h825k7gf0z5jqg15"; depends=[BiocGenerics BiocParallel data_table DESeq2 GenomeInfoDb GenomicRanges R_utils S4Vectors SummarizedExperiment]; }; - DEXSeq = derive2 { name="DEXSeq"; version="1.34.1"; sha256="1m03awaw06mfv5gszq23k5apsqqzjqa5rcwp20y4xbpl7bywpsyl"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; - DEqMS = derive2 { name="DEqMS"; version="1.6.0"; sha256="0p5qlkp7rvjf2634mh3526miryrxshk6ivlri5l96381xzylrgrw"; depends=[ggplot2 limma]; }; - DEsingle = derive2 { name="DEsingle"; version="1.8.2"; sha256="0sfflsbhngz4jq5riwqdmsgj90a62jzvpgc5jv5pipxz2h35k2q7"; depends=[bbmle BiocParallel gamlss MASS Matrix maxLik pscl VGAM]; }; - DEsubs = derive2 { name="DEsubs"; version="1.14.0"; sha256="1wrhh1235bp9k321mwm81biqbqjsz2bf1g39m6zkkjd5iqwv16xp"; depends=[circlize DESeq DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL]; }; - DFP = derive2 { name="DFP"; version="1.46.0"; sha256="1yqgyp69rdw99fg3xxdgyr7sf2vdzyxhvnwnys21lscsh41235x4"; depends=[Biobase]; }; - DIAlignR = derive2 { name="DIAlignR"; version="1.0.5"; sha256="0gdq3cbki2a3bhq1ipd1cixqdml23dgi0icli3qv4vdrk932bq8d"; depends=[DBI dplyr ggplot2 gridExtra mzR Rcpp rlang RSQLite scales signal tidyr zoo]; }; - DMCFB = derive2 { name="DMCFB"; version="1.2.0"; sha256="06c1xw3hmp5ibfn9ws71b1hj6da2lswgz5g6kgjlxzg7nm87y6zw"; depends=[arm benchmarkme BiocParallel data_table fastDummies GenomicRanges IRanges MASS matrixStats rtracklayer S4Vectors speedglm SummarizedExperiment tibble]; }; - DMCHMM = derive2 { name="DMCHMM"; version="1.10.0"; sha256="1zyjpimvgsimz1xb4i9mc79yl9cj5ivqzc1rlvdpmisb1zls89q9"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; }; - DMRScan = derive2 { name="DMRScan"; version="1.10.0"; sha256="09rdmd0x5rhysxvipdnvfhp7y5l9n3r8b5xqn8dz96pfdddli8nm"; depends=[GenomeInfoDb GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; }; - DMRcaller = derive2 { name="DMRcaller"; version="1.20.0"; sha256="0an24sa3d760d6pp2z5dclammmqys0snbx41rlcgb0yhljv5bja5"; depends=[betareg GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; - DMRcate = derive2 { name="DMRcate"; version="2.2.3"; sha256="1ly90isdzbpqhy3y0gjkhg5qkgdqj0w1n6kvjyl4xi8s70v1nps5"; depends=[bsseq DSS edgeR ExperimentHub GenomeInfoDb GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors SummarizedExperiment]; }; - DMRforPairs = derive2 { name="DMRforPairs"; version="1.24.0"; sha256="0fxsf7m0ks9ycx7nnyi4v7qr5lcgab8ayfvl1bk763wy77nipaiq"; depends=[GenomicRanges Gviz R2HTML]; }; - DNABarcodeCompatibility = derive2 { name="DNABarcodeCompatibility"; version="1.4.0"; sha256="0l9q3c12lramf4pdbv58hcmyv3d8j082l17aqjpyjvabla4zk8yc"; depends=[DNABarcodes dplyr numbers purrr stringr tidyr]; }; - DNABarcodes = derive2 { name="DNABarcodes"; version="1.18.0"; sha256="03y39hjpkb05fnawy3k797bph1iydi1blmpgyy4244zjgk6rs5x7"; depends=[BH Matrix Rcpp]; }; - DNAcopy = derive2 { name="DNAcopy"; version="1.62.0"; sha256="0jg8lr83drzfs5h73c7mk7x99vj99a2p2s1sqjc4gicn927xvhza"; depends=[]; }; - DNAshapeR = derive2 { name="DNAshapeR"; version="1.16.0"; sha256="12blxm5x9x3z6ac9vfachsfz18dqmm1qb5vzs1v9v3pbwfmf0l0r"; depends=[Biostrings fields GenomicRanges Rcpp]; }; - DOSE = derive2 { name="DOSE"; version="3.14.0"; sha256="1j0wcg7w2ns3ag9d272cqlg3j62ag2xnc5gfsjl6g2ij5xkvylb8"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim qvalue reshape2]; }; - DRIMSeq = derive2 { name="DRIMSeq"; version="1.16.1"; sha256="0jmgizygbxqnzsjm81gq2dnr2ijncfda7agpzd0bhvsy7s8wl6cm"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; }; - DSS = derive2 { name="DSS"; version="2.36.0"; sha256="04ypp7mcjiwz0ny86v3rfp3mdj4sl3i2cpqvy0f84nqyxgv4vd0j"; depends=[Biobase BiocParallel bsseq DelayedArray]; }; - DTA = derive2 { name="DTA"; version="2.34.0"; sha256="083g37ygrs0n07dp4lf7i8lq5496lyh42dksf1ymbyimgm1d5vyj"; depends=[LSD scatterplot3d]; }; - DaMiRseq = derive2 { name="DaMiRseq"; version="2.0.0"; sha256="0vkygvrv18an74697h4ipym1ng3s3ffmnpjrn0qqm41mvvajy14j"; depends=[arm caret corrplot DESeq2 e1071 EDASeq edgeR FactoMineR FSelector ggplot2 Hmisc ineq kknn limma lubridate MASS pheatmap pls plsVarSel plyr randomForest RColorBrewer reshape2 RSNNS SummarizedExperiment sva]; }; - DeMAND = derive2 { name="DeMAND"; version="1.18.0"; sha256="0p420ywmwjqz6j1ym5fqv2gplzl4j2wv12iz6hfzfv53x0wsgm8k"; depends=[KernSmooth]; }; - DeMixT = derive2 { name="DeMixT"; version="1.4.0"; sha256="13vra0y77yb0zm2g4pxw0x1kijjrx48m654x0qffb4n2ai5mkpdg"; depends=[base64enc ggplot2 KernSmooth knitr matrixcalc matrixStats Rcpp SummarizedExperiment truncdist]; }; - DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.30.0"; sha256="0sm3p1x5nknvjbck93ixgcvsj7f43rdq8lzhi99aghbb4vz206sz"; depends=[ggplot2 limSolve pcaMethods]; }; - DeepBlueR = derive2 { name="DeepBlueR"; version="1.14.0"; sha256="096gqprr5dy1lhw5wck7r9dmy0iw5qx9gm4k53k44wjgk9bz42ph"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; }; - DelayedArray = derive2 { name="DelayedArray"; version="0.14.1"; sha256="0xi0i621hrl7k9rsc8x8nc3ib74sk8hxhbyr2lxqclw45pk95s7v"; depends=[BiocGenerics IRanges Matrix matrixStats S4Vectors]; }; - DelayedDataFrame = derive2 { name="DelayedDataFrame"; version="1.4.0"; sha256="1wipxplcgzhglrgjnwb7f3n2acrf40qv8nb02im233ixyb7r4l3c"; depends=[BiocGenerics DelayedArray S4Vectors]; }; - DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.10.1"; sha256="046sam0rz42ph0m7jz7v3bck7d3h2mp45gzywh5dvc1qkjq6fdxx"; depends=[BiocParallel DelayedArray HDF5Array IRanges Matrix matrixStats S4Vectors]; }; - DepecheR = derive2 { name="DepecheR"; version="1.4.1"; sha256="0dscfl6wxpl5538jzkrwisdwbr873d38rzd19vl6z5br71jvpv3v"; depends=[beanplot doSNOW dplyr FNN foreach ggplot2 gplots MASS matrixStats mixOmics moments Rcpp RcppEigen reshape2 robustbase viridis]; }; - DiffBind = derive2 { name="DiffBind"; version="2.16.2"; sha256="11y9kigdikqcd0cnksh306nsaadak0kgivk7773mv3yszrxxwzj1"; depends=[amap BiocParallel DESeq2 dplyr edgeR GenomicAlignments GenomicRanges ggplot2 ggrepel gplots IRanges lattice limma locfit RColorBrewer Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment systemPipeR]; }; - DiffLogo = derive2 { name="DiffLogo"; version="2.12.2"; sha256="0wl8q1vm4b9f0hfypn4q1xc3jiqgjl1h7kiigkfj2kxih96qw3jw"; depends=[cba]; }; - Director = derive2 { name="Director"; version="1.14.0"; sha256="144jkdnxfkvp2pxh1fq6xr9qilsxv3g8b6y294l45hxm8zag8r9v"; depends=[htmltools]; }; - DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.30.0"; sha256="1m9dsrddrllb2i88qzik1867iv9mggrgdkn0dlp8sq7gl69vmalb"; depends=[BiocGenerics IRanges S4Vectors]; }; - DiscoRhythm = derive2 { name="DiscoRhythm"; version="1.4.2"; sha256="0vrra6mrd0awjnhvb1vha0g35nn7wa5bdxq5g8qaiq5bq850p886"; depends=[BiocGenerics BiocStyle broom data_table dplyr DT ggExtra ggplot2 gridExtra heatmaply kableExtra knitr magick matrixStats matrixTests MetaCycle plotly reshape2 rmarkdown S4Vectors shiny shinyBS shinycssloaders shinydashboard shinyjs SummarizedExperiment UpSetR VennDiagram viridis zip]; }; - DominoEffect = derive2 { name="DominoEffect"; version="1.8.0"; sha256="0m9l1zdghsv3haqk03ab9768vqbsiz0dibp9xlhl998mjlaixmbz"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomeInfoDb GenomicRanges IRanges SummarizedExperiment VariantAnnotation]; }; - Doscheda = derive2 { name="Doscheda"; version="1.10.4"; sha256="1zgy89gpylzxikrddbsv39ilx0q6pkjjyrbz5jnmlp7jp0l50zf0"; depends=[affy calibrate corrgram drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; }; - DriverNet = derive2 { name="DriverNet"; version="1.28.0"; sha256="02sw2dpa0hkmq7pn8x22mp6zvy1q9ck26rx3bpnlkzwa4ij95rc6"; depends=[]; }; - DropletUtils = derive2 { name="DropletUtils"; version="1.8.0"; sha256="0zqwx0a9frsw3pmm47pwpd6rxaps0cy1hqv1iw0qv14zdhi379y2"; depends=[beachmat BH BiocParallel dqrng edgeR HDF5Array Matrix R_utils Rcpp rhdf5 Rhdf5lib S4Vectors SingleCellExperiment]; }; - DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.30.0"; sha256="1mv7g47qjzf7id00jlxcd8s5irps13nqi5m1n1g5q3jp3rgxk6db"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; - Dune = derive2 { name="Dune"; version="1.0.1"; sha256="0i4mwkvnqacd8lhmly32kq4ngb7f4zrlwrg6ryx993yfmnqns0bq"; depends=[BiocParallel dplyr gganimate ggplot2 magrittr mclust purrr RColorBrewer SummarizedExperiment tidyr]; }; - DupChecker = derive2 { name="DupChecker"; version="1.25.0"; sha256="1yp9dbs2k1mg4lvy043gf6jbqiv8wynryvv46jhylchdg71fw8c9"; depends=[R_utils RCurl]; }; - DynDoc = derive2 { name="DynDoc"; version="1.66.0"; sha256="12jg8kjpv2ig11i4wy08d2yy44x11hsyzb2wjjm4h441rq057yn0"; depends=[]; }; - EBImage = derive2 { name="EBImage"; version="4.30.0"; sha256="13amrbh545hwk7sygndzyv7wpa0m2y0lzlwj89jm1xm62x577w9v"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; }; - EBSEA = derive2 { name="EBSEA"; version="1.16.0"; sha256="060v004kbxrz5zqs90cdnwqqcbs1wlgap399rfnfxk7jw775farz"; depends=[edgeR limma plyr]; }; - EBSeq = derive2 { name="EBSeq"; version="1.28.0"; sha256="0s9r1xxpfm5794ipjm5a5c8gfxicc6arma6f74aaz8zi5y5q9x5f"; depends=[blockmodeling gplots testthat]; }; - EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.22.0"; sha256="0aw46wypnljpx9v9s5qpfs7qys45p2br2kg70q0bg63r340rilq9"; depends=[EBSeq]; }; - EBarrays = derive2 { name="EBarrays"; version="2.52.0"; sha256="00ld26bld8xgin9zqwxybahvhmqbrvr09jfphg0yr4j4zck6sqgf"; depends=[Biobase cluster lattice]; }; - EBcoexpress = derive2 { name="EBcoexpress"; version="1.32.0"; sha256="03r6isrdplhkfp416a6y53g6pvdv0ssmlxfs9z277s3nqsm9zpqm"; depends=[EBarrays mclust minqa]; }; - EDASeq = derive2 { name="EDASeq"; version="2.22.0"; sha256="12gzxjh73qshlwvsf92lbrf4bi199kxg2snrkprh1z4yqf7bjfm4"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics BiocManager biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; - EDDA = derive2 { name="EDDA"; version="1.26.0"; sha256="0chp1m1q3sjknzl5vj5l17c0q9yws934vzavr5vpzxqk0a0lk98w"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; }; - EGAD = derive2 { name="EGAD"; version="1.16.0"; sha256="068ck2j9bkml3vj33gn7q3gjrj8lac458y871rx3pyxa1y18m42x"; depends=[affy arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS Matrix plyr RColorBrewer RCurl zoo]; }; - EGSEA = derive2 { name="EGSEA"; version="1.16.0"; sha256="0sxlhk8wzmfplss9mf9fw6wwvzalri2jx5f8hrv5rb7mj826yk8v"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 Glimma globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; }; - ELBOW = derive2 { name="ELBOW"; version="1.24.0"; sha256="06v566bdlgmvc0sc1yw5z46qfcg7l72jn3kx8c8v8ijwnlsn9j1j"; depends=[]; }; - ELMER = derive2 { name="ELMER"; version="2.12.0"; sha256="04ly8khbzkmqz4gdg9xljl14las8igrq1i03liclwv19vz249n92"; depends=[biomaRt circlize ComplexHeatmap DelayedArray doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggpubr ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr progress purrr readr reshape reshape2 rmarkdown rtracklayer rvest S4Vectors scales stringr SummarizedExperiment TCGAbiolinks tibble tidyr xml2]; }; - EMDomics = derive2 { name="EMDomics"; version="2.18.0"; sha256="1ngw22nd2rzdmb0xc9hif9anh1v431la1nbg2b0l2qxyi7whaslf"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; - ENCODExplorer = derive2 { name="ENCODExplorer"; version="2.14.0"; sha256="1321zk9vkaz1xxzb1r447w536srnbscmn9wbsynhfabdky8n8yp8"; depends=[AnnotationHub data_table dplyr ENCODExplorerData GenomeInfoDb GenomicRanges jsonlite RCurl rtracklayer S4Vectors stringi stringr tidyr]; }; - ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.36.0"; sha256="1yixqwllzq9a5cxnd2w06691dzjn33v7fmfdgykfvik05s19qc2n"; depends=[rJava XML]; }; - ENmix = derive2 { name="ENmix"; version="1.25.1"; sha256="1860l5y7w5hyg79j7lmsdxd68f8dgqcdlp81vlmdfql7547yid3h"; depends=[AnnotationHub Biobase doParallel dynamicTreeCut ExperimentHub foreach genefilter geneplotter gplots illuminaio impute IRanges irr matrixStats minfi preprocessCore quadprog RPMM S4Vectors SummarizedExperiment]; }; - ERSSA = derive2 { name="ERSSA"; version="1.6.0"; sha256="06d2yjcpzk40hr6n87ivfcaxjr9bwj97i0ns7cnlkzyzf3ymck9v"; depends=[BiocParallel DESeq2 edgeR ggplot2 plyr RColorBrewer]; }; - EasyqpcR = derive2 { name="EasyqpcR"; version="1.30.0"; sha256="0pf9k6hgbwhlhi75bgs640cp5jri2vc21pml0s89phs048cpkqqb"; depends=[matrixStats plotrix plyr]; }; - EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.16.0"; sha256="1brvls8z49x632yny835s90smxbac8bgnykcmn96sgs2lm6g7qbj"; depends=[]; }; - EnMCB = derive2 { name="EnMCB"; version="1.0.11"; sha256="17c1bwdb92d17v547pw9flrkryr5bi9kbh9cwka0zbzfb32pbc16"; depends=[doParallel foreach ggplot2 glmnet IlluminaHumanMethylation450kanno_ilmn12_hg19 minfi survival survivalROC survivalsvm]; }; - EnhancedVolcano = derive2 { name="EnhancedVolcano"; version="1.6.0"; sha256="0xmsk3c2sz3c5rimaza5vj3ps2fdyl9dxxyvkws9frcz9d39mwb3"; depends=[ggplot2 ggrepel]; }; - EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.18.2"; sha256="1alz7awnmv0ml1vabqis2av9g4rr50bnjfmcwvixzaq23g6m969l"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; - EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.18.2"; sha256="0frknd19zgb8iw4wvdybhwrlbzwkki02bj9qx9sqwvfk0gvc54rk"; depends=[AnnotationDbi BiocFileCache biocGraph BiocManager ComplexHeatmap edgeR geneplotter GO_db graph graphite GSEABase hwriter KEGGgraph KEGGREST limma pathview rappdirs Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; }; - EpiDISH = derive2 { name="EpiDISH"; version="2.4.0"; sha256="0igymdkwcla1vlbkmnvdd6js0mizygsa082fwp61wbw49b872g40"; depends=[e1071 locfdr MASS matrixStats quadprog stringr]; }; - EpiTxDb = derive2 { name="EpiTxDb"; version="1.0.0"; sha256="02a5zwmbkymx2xzfjgzq5ix364820pi1q6y72cayqn9pv4qgaxll"; depends=[AnnotationDbi BiocFileCache BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges httr IRanges Modstrings RSQLite S4Vectors tRNAdbImport xml2]; }; - EventPointer = derive2 { name="EventPointer"; version="2.6.0"; sha256="1dbb3zjzn2d7ccd0dnhw6md284vfblh443mm7nzj8jr90520zbwf"; depends=[affxparser Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg38 cobs doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges graph igraph IRanges limma MASS Matrix matrixStats nnls prodlim qvalue RBGL rhdf5 S4Vectors SGSeq stringr SummarizedExperiment]; }; - ExCluster = derive2 { name="ExCluster"; version="1.6.0"; sha256="087j5z7mi74rrvgj53isfdg90y8ss4qia940qbpsgfjvwaj66ai2"; depends=[GenomicRanges IRanges matrixStats Rsubread rtracklayer]; }; - ExiMiR = derive2 { name="ExiMiR"; version="2.30.0"; sha256="047f42lby6m8n1nv97wrdly5fcalhbdf373jy9kijcnqvrz77dpl"; depends=[affy affyio Biobase limma preprocessCore]; }; - ExperimentHub = derive2 { name="ExperimentHub"; version="1.14.2"; sha256="1kgvprchz1fg8pl1irj62mk2gyb4jcc9iimpypv4c2iccy5bp84x"; depends=[AnnotationHub BiocFileCache BiocGenerics BiocManager curl rappdirs S4Vectors]; }; - ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.14.1"; sha256="017siipnd11l0wi1wy30iav7yaxnvp2j872x4pbglk8yr5mi4fcy"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocManager biocViews curl DBI ExperimentHub graph httr S4Vectors]; }; - ExploreModelMatrix = derive2 { name="ExploreModelMatrix"; version="1.0.2"; sha256="0zmkfi3l5lgk8z1c87ygj6k1gad3z0szv9a7mm2bklyjyy3nhay0"; depends=[cowplot dplyr DT ggplot2 limma magrittr MASS rintrojs S4Vectors scales shiny shinydashboard tibble tidyr]; }; - ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.16.0"; sha256="13fiyaaillx44yc5rl58b3vsjl47y8adv2cq06anm8zc1v3ddvdr"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; }; - ExpressionView = derive2 { name="ExpressionView"; version="1.40.0"; sha256="195l8jz22bg8rb8r6hyqwn3r57cjvnwgncvd5nchbjwbl77mpdig"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; }; - FCBF = derive2 { name="FCBF"; version="1.6.0"; sha256="1y9l1m2b84vzkmzm07wb09q5b6yxhhxs6p5zgxflbcb3lv3mspjr"; depends=[ggplot2 gridExtra mclust pbapply SummarizedExperiment]; }; - FELLA = derive2 { name="FELLA"; version="1.8.0"; sha256="05g4rg8mq5zmfw6cmdnrd8222chggb3hmp3dixfp6aayv40lnvcr"; depends=[igraph KEGGREST Matrix plyr]; }; - FEM = derive2 { name="FEM"; version="3.15.0"; sha256="1d0p5jibzmfs2kmxlr30yr2ws1b3jyhpsbng1iszd6q904k302xd"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; }; - FGNet = derive2 { name="FGNet"; version="3.22.1"; sha256="02jlkhi81d0z8f384acl4c1xzzv0hlgzkb9y3gmydx7pai3a6rrb"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; - FISHalyseR = derive2 { name="FISHalyseR"; version="1.22.0"; sha256="1hhfi6rznqjzf4iq606qx9phql7kdv35m1dl71dpvczvsyajxlsn"; depends=[abind EBImage]; }; - FRASER = derive2 { name="FRASER"; version="1.0.2"; sha256="1x64kv8lrxspai1yafxcj8gnzjcb1b33mynnnfw0sh91ffj2222v"; depends=[AnnotationDbi BBmisc Biobase BiocGenerics BiocParallel biomaRt BSgenome cowplot data_table DelayedArray DelayedMatrixStats extraDistr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel HDF5Array IRanges matrixStats pcaMethods pheatmap plotly PRROC R_utils RColorBrewer Rcpp RcppArmadillo rhdf5 Rsamtools Rsubread S4Vectors SummarizedExperiment tibble VGAM]; }; - FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.24.0"; sha256="0wxxhhfy8y8nnz037wxxj69hsyf1hznklhd955r2ifzjnhm0kv79"; depends=[fda MASS]; }; - FamAgg = derive2 { name="FamAgg"; version="1.16.0"; sha256="1igmbcca10fanlnyjkhhnsbpcadq3914yggp5b7r857inqrv76jp"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; }; - FastqCleaner = derive2 { name="FastqCleaner"; version="1.6.0"; sha256="1b4il9hvpif6galzgzhcp4j6y1kh62y7hc3wislv7zp33lq80888"; depends=[Biostrings DT htmltools IRanges Rcpp S4Vectors shiny shinyBS ShortRead]; }; - FindMyFriends = derive2 { name="FindMyFriends"; version="1.18.0"; sha256="0c86v2nfpy81ndi2cw14fw7vzqpc5i3ik59wl48b5h5n3592bc24"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; - FitHiC = derive2 { name="FitHiC"; version="1.14.0"; sha256="1dffkdxm08wq4kjd9j2v2625x3p6vbrk33a2zx94pwpgkghr72yp"; depends=[data_table fdrtool Rcpp]; }; - FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.20.0"; sha256="0fn8k9w5zdvca45cx46w00q6f5my0ca00djl04v17kwzc0ywch98"; depends=[jsonlite RCurl XML]; }; - FlowSOM = derive2 { name="FlowSOM"; version="1.20.0"; sha256="1p17jv4q1dbcc47jpjy9hbcvzpwrx8waq7qpcj778jsyz6z6jh78"; depends=[BiocGenerics ConsensusClusterPlus CytoML flowCore flowWorkspace igraph RColorBrewer tsne XML]; }; - FoldGO = derive2 { name="FoldGO"; version="1.6.0"; sha256="1gf6b2s18c92bvgj7y0dk52k5by2z6xmfw4ah23rl70gm0dy1r0s"; depends=[ggplot2 tidyr topGO]; }; - FourCSeq = derive2 { name="FourCSeq"; version="1.22.1"; sha256="14q1ijnqnbd9xs60sfvyqjfiypjrvhacpwp2v85yfhcxw870cx5b"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; }; - FunChIP = derive2 { name="FunChIP"; version="1.14.0"; sha256="02lv9bw3cxjyfxqjg7kvhvdzxwmnyraalhr1f887322xicq6gxjm"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; }; - FunciSNP = derive2 { name="FunciSNP"; version="1.32.0"; sha256="06yx35hg0lpg7draai4nsl9ggjq2rxdrwrsycky9g8a57r2gr327"; depends=[Biobase BiocGenerics ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; - GA4GHclient = derive2 { name="GA4GHclient"; version="1.12.0"; sha256="0ia4vispy75pk3gfd5aaa0gjs2l3frfc71ykjr6r2j2qbw0lcjiq"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; }; - GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.10.0"; sha256="0qrqm2cmsnl3qkvaj5vhyxddyny0ds9ba26z45ciz6a5jafmsl5h"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; }; - GAPGOM = derive2 { name="GAPGOM"; version="1.4.0"; sha256="162bjk3dsqjxf1zgxr353bk072x91y0587akx8m125mwymgdlfw4"; depends=[AnnotationDbi Biobase BiocFileCache data_table dplyr fastmatch GEOquery GO_db GOSemSim graph igraph magrittr Matrix matrixStats org_Hs_eg_db org_Mm_eg_db plyr RBGL]; }; - GARS = derive2 { name="GARS"; version="1.8.0"; sha256="0nqar2fv89b29yil7sjmd8c1j0li5r73x74qmiz7nv7d4iyv3h5l"; depends=[cluster DaMiRseq ggplot2 MLSeq SummarizedExperiment]; }; - GAprediction = derive2 { name="GAprediction"; version="1.14.0"; sha256="1av3vl19xp9qmgvr712rhczlp07686bhb4wi74fixxnk7i0791wm"; depends=[glmnet Matrix]; }; - GCSConnection = derive2 { name="GCSConnection"; version="1.0.1"; sha256="09awkmfixz4cdgz6v90g4fdny7ayi0ncnzyj74gl0b2wdwxfvinf"; depends=[googleAuthR googleCloudStorageR httr jsonlite Rcpp]; }; - GCSscore = derive2 { name="GCSscore"; version="1.2.0"; sha256="09mbqn5cx8qp73dim6ir1kcyjw6syqxq0xlhygc1s5yvnia2w09c"; depends=[affxparser Biobase BiocManager data_table devtools dplR RSQLite stringr]; }; - GDCRNATools = derive2 { name="GDCRNATools"; version="1.8.0"; sha256="0c1kk8y9pqqfvw83k8rfhwc8v0sxg7r52cvfmsqn2r72j3zrzkdx"; depends=[BiocParallel biomaRt clusterProfiler DESeq2 DOSE DT edgeR GenomicDataCommons ggplot2 gplots jsonlite limma org_Hs_eg_db pathview rjson shiny survival survminer XML]; }; - GDSArray = derive2 { name="GDSArray"; version="1.8.0"; sha256="0nj75anpdfkss40phicii6c5b4arpp6p7hshz9yccfw9j7an358i"; depends=[BiocGenerics DelayedArray gdsfmt S4Vectors SeqArray SNPRelate]; }; - GEM = derive2 { name="GEM"; version="1.14.0"; sha256="1v0h32inynf703cz4dbd8wj6yvsmqybkzrw1fis8kkkgjcng0x3d"; depends=[ggplot2]; }; - GENESIS = derive2 { name="GENESIS"; version="2.18.0"; sha256="0jzaz87x6fi9ryndzj084dyh959a0lb1wx5mwxvfm1d32irdjzxa"; depends=[Biobase BiocGenerics data_table dplyr foreach gdsfmt GenomicRanges GWASTools igraph IRanges Matrix reshape2 S4Vectors SeqArray SeqVarTools SNPRelate]; }; - GENIE3 = derive2 { name="GENIE3"; version="1.10.0"; sha256="1bsm0gxracsyg1wnaw3whvskghfpbgbm9navr8wdmxj2hjp3dqs7"; depends=[reshape2]; }; - GEOmetadb = derive2 { name="GEOmetadb"; version="1.50.0"; sha256="1y4ldbfl63d2s9s7jxqbr8x6rwxq8nd1dsxd0yrzr5ka9k3ha6w2"; depends=[GEOquery RSQLite]; }; - GEOquery = derive2 { name="GEOquery"; version="2.56.0"; sha256="0sap1dsa3k3qpv5z5y3cimxyhbm8qai87gqn3g1w3hwlcqsss92m"; depends=[Biobase dplyr httr limma magrittr readr tidyr xml2]; }; - GEOsubmission = derive2 { name="GEOsubmission"; version="1.40.0"; sha256="0jkmdx6dj4mq8kfz2yp3lnvxy2pgqnibn513sk13mj2z1chgd1xr"; depends=[affy Biobase]; }; - GEWIST = derive2 { name="GEWIST"; version="1.32.0"; sha256="0c8j2r89l39qck3pg6b67xzrf6kgv9m4xz2nsmdxvpx50f774qc6"; depends=[car]; }; - GGBase = derive2 { name="GGBase"; version="3.50.0"; sha256="1x2iz08dxw2a7j0dzk101h8k2fjscqs1h2bysc1z767dlypfl7c6"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; }; - GGPA = derive2 { name="GGPA"; version="1.0.0"; sha256="1sgsxvwincj14sbnihvxi16ivpv1z1nc7f0ipz7965rzi994535f"; depends=[GGally matrixStats network Rcpp RcppArmadillo scales sna]; }; - GGtools = derive2 { name="GGtools"; version="5.24.0"; sha256="0n6srbxvw94jagkb48k4p1f6rvjfj96k5bzbzv9h2wf8a0yykrmf"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; - GIGSEA = derive2 { name="GIGSEA"; version="1.6.0"; sha256="1fp6q1p8y474h9swn15dkf2xk06y9cgflc3yxagd36y48jaf8z6n"; depends=[locfdr MASS Matrix]; }; - GISPA = derive2 { name="GISPA"; version="1.12.0"; sha256="1xmlp4zfhzqxlvqvdi7x170f8fd9pf52lri3ll84mmi0as2c0ya0"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; }; - GLAD = derive2 { name="GLAD"; version="2.52.0"; sha256="1kg4hz0r38q02w3mrqh6s5llhgp8hd8jw4n54fvi5npjq68y7xlw"; depends=[aws]; }; - GMRP = derive2 { name="GMRP"; version="1.16.0"; sha256="0l38yqjyl6za6wkx435cygcwj1mhqw57l7bgcnp7s0606a82vql1"; depends=[diagram GenomicRanges plotrix]; }; - GNET2 = derive2 { name="GNET2"; version="1.4.0"; sha256="0853nrd4zwgidmn73az1352y5jcxl65siijnx1v0gac8wj1vgkn1"; depends=[DiagrammeR dplyr ggplot2 igraph matrixStats Rcpp reshape2 SummarizedExperiment xgboost]; }; - GOFunction = derive2 { name="GOFunction"; version="1.35.0"; sha256="172abls5qlcg7kq0bax9z0xj75f7wmj3725h6s7hl0dwjjiypair"; depends=[AnnotationDbi Biobase DBI GO_db graph Rgraphviz SparseM]; }; - GOSemSim = derive2 { name="GOSemSim"; version="2.14.2"; sha256="02r7m1x6g8bb7q8l0hpvakdzdv5v1nplhx5lbiy798a7c3xg895b"; depends=[AnnotationDbi GO_db Rcpp]; }; - GOSim = derive2 { name="GOSim"; version="1.26.0"; sha256="1q8q48vggqsi1wnv2c188rhcvn8njzzmgi479z99854l3557va32"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; - GOTHiC = derive2 { name="GOTHiC"; version="1.24.0"; sha256="077wrwf7y10nwvkc3pv1kw38bm14zivr0h5df7b1382sisbqv69n"; depends=[BiocGenerics BiocManager Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; - GOexpress = derive2 { name="GOexpress"; version="1.22.0"; sha256="1zkqly6xsyna7151yfdws089i0imzh8ck0q003ds8bvm764prds0"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; }; - GOfuncR = derive2 { name="GOfuncR"; version="1.8.0"; sha256="1ixjkqb9wpwqfzxsg0h96c6fa63wrk72sfh6x4pq0kpyrcc0ind1"; depends=[AnnotationDbi GenomicRanges gtools IRanges mapplots Rcpp vioplot]; }; - GOpro = derive2 { name="GOpro"; version="1.14.0"; sha256="1xs3gf5q0b7krk1rqr1p31m75ixrpjrvw1q4af1xlxxzv5zw3j92"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; }; - GOstats = derive2 { name="GOstats"; version="2.54.0"; sha256="00q39cyv4l28r6s9gjnd0qhl7h80vmwp4lpmchisqzj44xzyics9"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; }; - GOsummaries = derive2 { name="GOsummaries"; version="2.24.0"; sha256="0r7aq2s638hb7s39fjbyics9kvrmmizm5pa490xv19p0dm7hhllj"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; - GPA = derive2 { name="GPA"; version="1.0.0"; sha256="0wcl3rnlvnn2m2rwhjyx1ydanmr0zp8ka41yvbllxc6p7w73dr0b"; depends=[DT ggplot2 ggrepel plyr Rcpp shiny shinyBS vegan]; }; - GRENITS = derive2 { name="GRENITS"; version="1.40.0"; sha256="1824d5d3w9f95k9j9j5l50m0vjmaahy43maga341ppaklqvh6x19"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; - GRmetrics = derive2 { name="GRmetrics"; version="1.14.0"; sha256="1zpmcmykxalqahn14h0a60fsrb4gp07bnbj50lasw0jyg603m31m"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; }; - GRridge = derive2 { name="GRridge"; version="1.12.0"; sha256="1lqmx69a8xib7hqg203927cg3h0bfaiaiz76i9asi0jxhrqzh4q6"; depends=[glmnet graph Iso mvtnorm penalized survival]; }; - GSALightning = derive2 { name="GSALightning"; version="1.16.0"; sha256="08hv7v19gzfjaa37r8q4c88skrfz1awi42cp40680hjchm6mkxi9"; depends=[data_table Matrix]; }; - GSAR = derive2 { name="GSAR"; version="1.22.0"; sha256="0war5rvs6vdbbal5g9qhrisgf4rbhcdpx3lxqw1nyiv2gfkrszmv"; depends=[igraph]; }; - GSCA = derive2 { name="GSCA"; version="2.17.0"; sha256="0a6sna2ccyg1qxbhd2srg4hbivgpsac6bgs03bkxf4b0jqxza9zn"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; - GSEABase = derive2 { name="GSEABase"; version="1.50.1"; sha256="1k4faj53cwvqijad8cf7fcghzxcv9shlbpl8n73bsncc8k192y2j"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; - GSEABenchmarkeR = derive2 { name="GSEABenchmarkeR"; version="1.8.0"; sha256="0lvh8j6ixxvh3klkafdvf8jdr4lxs92mm002d3p1ns3m9z9gpin3"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache BiocParallel edgeR EnrichmentBrowser ExperimentHub KEGGandMetacoreDzPathwaysGEO KEGGdzPathwaysGEO rappdirs S4Vectors SummarizedExperiment]; }; - GSEAlm = derive2 { name="GSEAlm"; version="1.48.0"; sha256="1jgh806jysws49czkcrbz7b69hkyrwwrsjarzf6nd234097rxbbc"; depends=[Biobase]; }; - GSRI = derive2 { name="GSRI"; version="2.36.0"; sha256="1w53fn9aihj1l2shv2dydvnc9kjxmxmj4lw2vp1ds0fs833bvh7y"; depends=[Biobase fdrtool genefilter GSEABase les]; }; - GSReg = derive2 { name="GSReg"; version="1.22.0"; sha256="1zpsqaqxhqhgf2jr7hq918f6bdjlvb2vsyp46bxkspkbprpljx6b"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; }; - GSVA = derive2 { name="GSVA"; version="1.36.3"; sha256="1arbzjr88yibbg8f9zmb6s5lvambbp72bc1rg0dmm6a032y9crjq"; depends=[Biobase BiocGenerics BiocParallel fastmatch GSEABase S4Vectors shiny shinythemes SummarizedExperiment]; }; - GUIDEseq = derive2 { name="GUIDEseq"; version="1.18.0"; sha256="0synw91pis14ysi0bwndgzf8pa2cq2ls9l7l4v47163yi7ddcfi1"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; - GWASTools = derive2 { name="GWASTools"; version="1.34.0"; sha256="18jxfgv5l1cg0024pzf5ns7l2s4dpfai6xz2lzbi0afjms9x0awp"; depends=[Biobase DBI DNAcopy dplyr gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; - GateFinder = derive2 { name="GateFinder"; version="1.8.0"; sha256="076165xapgmds3syrq4j1r7w8lwlqxchdmrn9clqasd3pp97dp1x"; depends=[diptest flowCore flowFP mvoutlier splancs]; }; - GenRank = derive2 { name="GenRank"; version="1.15.0"; sha256="17cw9y5mh94if7szdjgz5c0q0j50b8xg5vc4wv7nv87gvnpaaw9x"; depends=[matrixStats reshape2 survcomp]; }; - GenVisR = derive2 { name="GenVisR"; version="1.20.0"; sha256="0mdix3bfdqdz4khm5lq2sl2dyza7xcih5fygm8yjfx5c3266cdkz"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome data_table DBI FField GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales VariantAnnotation viridis]; }; - GeneAccord = derive2 { name="GeneAccord"; version="1.6.0"; sha256="1qz49nmkmrli0c5zl1s76ii5vfyd6va4dzaclxbia1dgafwld4c8"; depends=[biomaRt caTools dplyr ggplot2 ggpubr gtools magrittr maxLik RColorBrewer reshape2 tibble]; }; - GeneAnswers = derive2 { name="GeneAnswers"; version="2.30.0"; sha256="0sd91lnknix6z9xgfc8i00l41p0fsz2w5l11p3wh7r9j1kqp1air"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; - GeneBreak = derive2 { name="GeneBreak"; version="1.18.0"; sha256="1rc0wngxl8g89icj612m8g77hhzw20jygpk9z8s0ky955fs8m7y8"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; - GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.34.0"; sha256="0ggn2rbkbmqflk7114zn9zg898ilsbydrbhk7q5nxr329xj383k4"; depends=[Biobase PGSEA]; }; - GeneGA = derive2 { name="GeneGA"; version="1.38.0"; sha256="0vpak9k5dc7v2nqc8jn8ibd8sndjmyjr5rsba1790ydg40m04fj4"; depends=[hash seqinr]; }; - GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.14.0"; sha256="16kr2hp6nhm7ww0vrx8f9xlrc63xcvn7d55jwy21kcqwilxwlsij"; depends=[data_table FactoMineR GenomicRanges GGtools igraph IRanges kernlab mvtnorm Rsamtools snpStats]; }; - GeneMeta = derive2 { name="GeneMeta"; version="1.60.0"; sha256="02hznqrajhqws3hvqgcz7wrkzrr922ld6ynq66hyg9a76z2nbag6"; depends=[Biobase genefilter]; }; - GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.30.0"; sha256="0dps7cr50zslwbxqipzsf50rq201fbhwb1186wpav1zrmcig0xl9"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; }; - GeneOverlap = derive2 { name="GeneOverlap"; version="1.24.0"; sha256="1r90ykp6yb0kfa2njvh6icn6ddkf1pkw2v076i0j6mwbkl34hc9a"; depends=[gplots RColorBrewer]; }; - GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.44.0"; sha256="144zssz7wwy7asv4nbpryz8dbhzyczc840vj0dk4k1h8rapgmgb8"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; }; - GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.32.0"; sha256="012il4pi95wm27960jiy9g948z51ylz1029553m5b6pl0f6fhybb"; depends=[Biobase limma MASS]; }; - GeneStructureTools = derive2 { name="GeneStructureTools"; version="1.8.0"; sha256="060229g9wg26k086g4a9kdwfw9gawym3hq1x9vdxxph11g0i1saf"; depends=[Biostrings BSgenome_Mmusculus_UCSC_mm10 data_table GenomicRanges Gviz IRanges plyr rtracklayer S4Vectors stringdist stringr]; }; - GeneTonic = derive2 { name="GeneTonic"; version="1.0.1"; sha256="0wrkzbnkidj53vd5l6ga9789gjngbsg197xbymwcaimfmfjismvx"; depends=[AnnotationDbi bs4Dash ComplexHeatmap dendextend DESeq2 dplyr DT dynamicTreeCut ggforce ggplot2 ggrepel GO_db igraph matrixStats plotly RColorBrewer rintrojs rlang rmarkdown S4Vectors scales shiny shinycssloaders shinyWidgets SummarizedExperiment tidyr viridis visNetwork]; }; - GeneticsDesign = derive2 { name="GeneticsDesign"; version="1.55.0"; sha256="14xnmqfqcrdanyayihqf1g4hckcfzl06rds6cf8vcp4852j7zap1"; depends=[gmodels gtools mvtnorm]; }; - GeneticsPed = derive2 { name="GeneticsPed"; version="1.50.0"; sha256="0wlmmxgpgyk2wz84598zyyjj7wdyqq2vlajnmpzcf7r2vgwrqp9a"; depends=[gdata genetics MASS]; }; - GenoGAM = derive2 { name="GenoGAM"; version="2.6.0"; sha256="06r9gzk9sp23qd4rffyc5bznw0gj8kcg4mrnjgkx3kjy48qz8nq3"; depends=[BiocParallel Biostrings data_table DelayedArray DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges HDF5Array IRanges Matrix Rcpp RcppArmadillo rhdf5 Rsamtools S4Vectors sparseinv SummarizedExperiment]; }; - GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.24.2"; sha256="1cqs53p4m5q1dr59war72bccphy01ilw4xra24fmngrv4x32rznd"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; }; - GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.24.0"; sha256="0v8k6d7frm5p48cmk4zik78cw9abz4inx0zhl4zrmmx31ifyvk8d"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; - GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.12.0"; sha256="1mn061chcq4az89v0a5r70wp56nlfg9vdrs89rq6cps5qri7kscq"; depends=[dplyr GenomicRanges httr IRanges jsonlite magrittr rappdirs readr rlang S4Vectors SummarizedExperiment tibble xml2]; }; - GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.40.1"; sha256="0zm7q957g952qyfqmvf27sldsnq6sqd0wlgnqzvmxayg9pxh0l0z"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; - GenomicFiles = derive2 { name="GenomicFiles"; version="1.24.0"; sha256="1k3824pzf9fdqvcv6cz2742q3mabpmncrc72hwa21ac8wy1b04n4"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.22.0"; sha256="0fg66v31nfajb40da6gxpigm2z11ywkdijs7npvc1mr62ynx9qmy"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; - GenomicOZone = derive2 { name="GenomicOZone"; version="1.2.0"; sha256="03hdg6gv8y8f3kfjmqpf4n0751y35c75d3kaxajpiy7j6g0i6s13"; depends=[biomaRt Ckmeans_1d_dp GenomeInfoDb GenomicRanges ggbio ggplot2 gridExtra IRanges plyr Rdpack S4Vectors sjstats]; }; - GenomicRanges = derive2 { name="GenomicRanges"; version="1.40.0"; sha256="0wn1zr2qq0rpv9z2wialgizn6xzdlcjg1w2kif67n53svz6vk2x1"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; - GenomicScores = derive2 { name="GenomicScores"; version="2.0.0"; sha256="0si2lgc37mkah4w990q1q2bf8xmshxj7cbx92bcrp0zaipjr96bb"; depends=[AnnotationHub Biobase BiocGenerics Biostrings DelayedArray GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors XML]; }; - GenomicTuples = derive2 { name="GenomicTuples"; version="1.22.1"; sha256="0xb4hcd4ysify3nzx5nb79hhw440n46fbx3w3mfgjgc56147105h"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; - GladiaTOX = derive2 { name="GladiaTOX"; version="1.4.0"; sha256="13h8n57z6a22q7b8qjr1w8lf9gh9xr4mp1lfpsk86wzf7xdybjdi"; depends=[brew data_table DBI ggplot2 ggrepel numDeriv RColorBrewer RCurl RJSONIO RMySQL RSQLite stringr tidyr XML xtable]; }; - Glimma = derive2 { name="Glimma"; version="1.16.0"; sha256="1bxfgwjqb9p400a5a5q6p17kcnl3ddz090llihkfih9kyxii9n4y"; depends=[edgeR jsonlite S4Vectors]; }; - GlobalAncova = derive2 { name="GlobalAncova"; version="4.6.0"; sha256="0z93hqzvxcbv42k40j83fa5bkk1jpmc5clmraa34wlh6n136k7xi"; depends=[annotate AnnotationDbi Biobase corpcor dendextend globaltest GSEABase VGAM]; }; - GmicR = derive2 { name="GmicR"; version="1.2.0"; sha256="09fn9p0h4jly3vbkq0d847qj1pl6jhi9p5fp155mapsa3g5dd0w0"; depends=[AnnotationDbi ape bnlearn Category data_table doParallel DT foreach GOstats gRain gRbase GSEABase org_Hs_eg_db org_Mm_eg_db reshape2 shiny WGCNA]; }; - GraphAT = derive2 { name="GraphAT"; version="1.60.0"; sha256="1cb6r6xl0dg82dvlayl5rnslna73w59p7zfwb5hafhgzb68ci1f3"; depends=[graph MCMCpack]; }; - GraphAlignment = derive2 { name="GraphAlignment"; version="1.52.0"; sha256="1r42nl1aghmx1d9pcmzrkzk4mlchv3cxyh026nd5k65wyp861smy"; depends=[]; }; - GraphPAC = derive2 { name="GraphPAC"; version="1.30.0"; sha256="0arb93kwg1z2a98059k0ipv3x8s4rpmb9sxm2kjhg0yn3mq7dgbr"; depends=[igraph iPAC RMallow TSP]; }; - GreyListChIP = derive2 { name="GreyListChIP"; version="1.20.0"; sha256="1y1q8w61jmxfc8g9ilz8qxap4ggm9kn7xp44nzlsi3ihxfbxcf5s"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; }; - Guitar = derive2 { name="Guitar"; version="2.4.0"; sha256="0qd8ll4qpqc8l1pnvr9lkdsx3pi9a4s8jd08hw4s2yl1vryg1rg3"; depends=[AnnotationDbi dplyr GenomicFeatures GenomicRanges ggplot2 knitr magrittr rtracklayer]; }; - Gviz = derive2 { name="Gviz"; version="1.32.0"; sha256="0cgkp0ciyy2qykqgh3vzp5mx9b4vsvacjh2jnsj3wldiapzlz08a"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; - HCABrowser = derive2 { name="HCABrowser"; version="1.4.0"; sha256="0klrw4iczflyljs0wp5pa2di5rl00bsz0f188wyysaw7akyc4kgh"; depends=[BiocFileCache curl dplyr googleAuthR httr jsonlite plyr readr rlang S4Vectors stringr tibble tidygraph tidyr]; }; - HCAExplorer = derive2 { name="HCAExplorer"; version="1.2.0"; sha256="1k563mkx088syha6m449a89q9xwlkbkmkbdghp0gka1z6pam3b6l"; depends=[curl dplyr httr jsonlite plyr rlang S4Vectors tibble tidygraph vctrs]; }; - HDF5Array = derive2 { name="HDF5Array"; version="1.16.1"; sha256="01767v90nl0499jcicpxngbbs0af5p9c5aasi5va01w3v5bnqddn"; depends=[BiocGenerics DelayedArray IRanges Matrix rhdf5 Rhdf5lib S4Vectors]; }; - HDTD = derive2 { name="HDTD"; version="1.22.0"; sha256="14kl4ys8h5kkcn49mlybzihl3iy8dy40c2giv1qmiy5p5jvbwijw"; depends=[Rcpp RcppArmadillo]; }; - HELP = derive2 { name="HELP"; version="1.46.0"; sha256="0bk9ajrvlir5cca3jmpwg9r6mpxngybbpvys00y2zwpi9dviwdjq"; depends=[Biobase]; }; - HEM = derive2 { name="HEM"; version="1.60.0"; sha256="0sk8vh1ic03sdhb0h695d7q9xj96m3pkd5bnfs2rn0mgy5q6w3r4"; depends=[Biobase]; }; - HIBAG = derive2 { name="HIBAG"; version="1.24.0"; sha256="013k9dzhycrnkf04pqqrlaz8pgga986ray0abipakqa95sjrz870"; depends=[]; }; - HIPPO = derive2 { name="HIPPO"; version="1.0.0"; sha256="0jmbazwz4blr6wgprfc4blbycs2vixvfhfvk27ax1pnzrjz5917j"; depends=[dplyr ggplot2 ggrepel gridExtra irlba magrittr Matrix reshape2 rlang Rtsne SingleCellExperiment umap]; }; - HIREewas = derive2 { name="HIREewas"; version="1.6.0"; sha256="1wz4058pnn8drcp79m7wqcvzgggqdjsd3rbnvjw9inq0r9bl6vwd"; depends=[gplots quadprog]; }; - HMMcopy = derive2 { name="HMMcopy"; version="1.30.0"; sha256="1p7zkwnjd3d8d06np6bcmgfdrlw0ad9aaxrxvmn55s4q6d53llcl"; depends=[data_table]; }; - HPAanalyze = derive2 { name="HPAanalyze"; version="1.6.0"; sha256="0b0jswr1mdr0k9abw7gzbjsfmfi1rmh5rphf9kgamg1v8m9zkf4b"; depends=[dplyr ggplot2 gridExtra openxlsx tibble xml2]; }; - HTSFilter = derive2 { name="HTSFilter"; version="1.28.0"; sha256="1arjb3xz5pcqm61baj7q2jn85fqzdgqzk7adk59hrjk31jr6fyf7"; depends=[Biobase BiocParallel DESeq DESeq2 edgeR]; }; - HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.18.0"; sha256="1xjs7pi8500b9nr2x9bbdxdbi3sz0l9g4d4by3wip9sfiq66c6g4"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; }; - HTqPCR = derive2 { name="HTqPCR"; version="1.42.0"; sha256="08bd5zkjdnz726s03bvvzv03va0xbrr818ipp6737z9g3nk9m81j"; depends=[affy Biobase gplots limma RColorBrewer]; }; - Harman = derive2 { name="Harman"; version="1.16.0"; sha256="0avr9c02iq8qvz712ssfqrx2kr9bz9wymy66rsgqn0fby63rkh2h"; depends=[Rcpp]; }; - Harshlight = derive2 { name="Harshlight"; version="1.60.0"; sha256="13qmzv4n1v9c9vs4bb229rq6ddawb04v191c6dqcd7nlwg0wdwdz"; depends=[affy altcdfenvs Biobase]; }; - Heatplus = derive2 { name="Heatplus"; version="2.34.0"; sha256="12nd0h8svx7qydv1shk0gdpvnbixf7qi6zh06881wsmxf5s970rw"; depends=[RColorBrewer]; }; - HelloRanges = derive2 { name="HelloRanges"; version="1.14.0"; sha256="1f7qpccyw5nxdb7dqgfn3faxy9aiab6n262hlnikk24r2s800zv6"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - HiCBricks = derive2 { name="HiCBricks"; version="1.6.0"; sha256="1gnybwffzlgckimikipp4kl58i6h7cxz0qxdg5jx2yb2hpbna4rr"; depends=[BiocParallel curl data_table digest GenomeInfoDb GenomicRanges ggplot2 IRanges jsonlite R_utils R6 RColorBrewer readr reshape2 rhdf5 S4Vectors scales stringr tibble viridis]; }; - HiCcompare = derive2 { name="HiCcompare"; version="1.10.0"; sha256="0rrrbr1656xl34k6js3ynv2czh8ciryw7r7hm9va91zjw74wak93"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq rhdf5 S4Vectors]; }; - HiLDA = derive2 { name="HiLDA"; version="1.2.0"; sha256="0kj93w5l69y179d36z3s520dgxf6ykgbmyjaa43cb1hy5gn5g93s"; depends=[abind BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot forcats GenomicFeatures GenomicRanges ggplot2 R2jags Rcpp S4Vectors stringr tidyr TxDb_Hsapiens_UCSC_hg19_knownGene XVector]; }; - HiTC = derive2 { name="HiTC"; version="1.32.0"; sha256="1jx2pfa7sbdz7xi466lz1h5xv126g56z73n0a5l2wrq28k47qaxy"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; - HilbertCurve = derive2 { name="HilbertCurve"; version="1.18.0"; sha256="1z3rd6hshh1mhqk4qqxsz6vi57r4882aa61f5x4zw2yzlhwlw6f4"; depends=[circlize GenomicRanges HilbertVis IRanges png polylabelr]; }; - HilbertVis = derive2 { name="HilbertVis"; version="1.46.0"; sha256="12vl2n2yclnvc0s5gsrl0hfsxva8sa56x8k72zskbgi7s9c8cq12"; depends=[lattice]; }; - HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.46.0"; sha256="1yvzx98hfw9i1bg2g516rdi6hp0c5j3vj63y5n0x6pckv82q71xb"; depends=[HilbertVis]; }; - HumanTranscriptomeCompendium = derive2 { name="HumanTranscriptomeCompendium"; version="1.4.0"; sha256="1qvm6pw3ij6g6v9qa6d1iq005rs4cclhg916b3pv8pcncf2q2z4v"; depends=[S4Vectors shiny ssrch SummarizedExperiment]; }; - HybridMTest = derive2 { name="HybridMTest"; version="1.32.0"; sha256="1knqyqb3q1l21h4n5572j773hm23rim8i7wbazldbg39dwxkmcwx"; depends=[Biobase fdrtool MASS survival]; }; - IHW = derive2 { name="IHW"; version="1.16.0"; sha256="169ir0k1gygdh1wybwa0drdxnhrdrlyzzy0rkygi7jsirn69m74j"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; - IMAS = derive2 { name="IMAS"; version="1.12.0"; sha256="1vq0i0568c6gqn4vqsaqrj038dm4qrnh32kmqmn3c0blwal8abia"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; }; - IMMAN = derive2 { name="IMMAN"; version="1.8.2"; sha256="06f3yfyzxxz6nk7i3irpxnsbd2dqaixyj1i26bfha4mn2wrfd882"; depends=[Biostrings igraph seqinr STRINGdb]; }; - IMPCdata = derive2 { name="IMPCdata"; version="1.24.0"; sha256="0jnj6mrwfjyfp4vgiyn5h2l9nry2gcqyjhp5bfsb086xvj98qvr4"; depends=[rjson]; }; - INDEED = derive2 { name="INDEED"; version="2.2.0"; sha256="10nlkkcqan6ihn9g2fxw306bcvgqvsfdcv2ar4pvs6jy939m6g1y"; depends=[devtools glasso igraph visNetwork]; }; - INPower = derive2 { name="INPower"; version="1.24.0"; sha256="1cfny1pyx29gdfcgp9xv87ra9n9kgl73qiv8kc71l5zdvvwja4l4"; depends=[mvtnorm]; }; - INSPEcT = derive2 { name="INSPEcT"; version="1.18.1"; sha256="16bdrfn4sx83nl81m7qvdxbx8l80y9da983497s6c45cad0jws6y"; depends=[Biobase BiocGenerics BiocParallel DESeq2 deSolve gdata GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges KernSmooth plgem pROC rootSolve Rsamtools rtracklayer S4Vectors shiny SummarizedExperiment TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - IONiseR = derive2 { name="IONiseR"; version="2.12.0"; sha256="05fndlblczabva60gn6h0dijqxyn0wknrv8a925fgc4bn415g31w"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; }; - IPO = derive2 { name="IPO"; version="1.14.0"; sha256="07agz8ambs974dfssvbralmk4id4dvrwz1grxzp1gh72a27f2072"; depends=[BiocParallel CAMERA rsm xcms]; }; - IPPD = derive2 { name="IPPD"; version="1.35.0"; sha256="00aa0pfawwinnx6wnmgwf8vm7j5g77xm1cikswj1f3k1r604p1ha"; depends=[bitops digest MASS Matrix XML]; }; - IRanges = derive2 { name="IRanges"; version="2.22.2"; sha256="1y24jw62806wp2afiyj1x6n00gj7d3323klqdypra9q43pg1w49d"; depends=[BiocGenerics S4Vectors]; }; - ISoLDE = derive2 { name="ISoLDE"; version="1.15.0"; sha256="1w3viwwyid04rfm9q3d85i1xm9yja25dqlz9yyqr13jgw0jhnwl0"; depends=[]; }; - ITALICS = derive2 { name="ITALICS"; version="2.48.0"; sha256="1gp71pfipmnad64l1q98528whw6b2drkrwxby14qdbgq8fcwvkqd"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; - IVAS = derive2 { name="IVAS"; version="2.8.0"; sha256="0zrxbyv3gdczldmcwlg53a9v4xxlkxmj7ln2lkcfmr80i3r30c74"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; }; - IWTomics = derive2 { name="IWTomics"; version="1.12.0"; sha256="1nh7pp8xcrs67wis8aq9mfdjhxpnxj2syag1yh7hs1yxxfavnrv2"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; }; - Icens = derive2 { name="Icens"; version="1.60.0"; sha256="0fh7wgkrw20f61p06i87nccnbig9wv4m0jcg7cx1rw7g2ndnabgp"; depends=[survival]; }; - IdeoViz = derive2 { name="IdeoViz"; version="1.24.0"; sha256="1ndj14qhpgidjb4qsga80ghqzz1x8kvy2gy1bvvgwlkfxa62rn50"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; - IgGeneUsage = derive2 { name="IgGeneUsage"; version="1.2.2"; sha256="1c2mbxq2l2gxgzsp0hbvmjq4ccarynrf5bsq90my10s08r53i64m"; depends=[Rcpp reshape2 rstan StanHeaders SummarizedExperiment]; }; - Imetagene = derive2 { name="Imetagene"; version="1.18.0"; sha256="0maazm996cww13cv3pkmwbwv89q03vfx9r8cv0vd6667mlprs21k"; depends=[ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; }; - ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.16.0"; sha256="0simrb1xdpb8vidg8faxjqwmmwskmdqnw46bfs5z29i792pnsl1i"; depends=[Biobase curl data_table digest flowCore flowWorkspace ggplot2 gplots heatmaply httr jsonlite pheatmap plotly preprocessCore R6 Rlabkey rmarkdown scales]; }; - ImpulseDE = derive2 { name="ImpulseDE"; version="1.13.0"; sha256="0pvsn3yja01c6imljdf09x1qax3bxc6b80jscxq0cnkys58czq43"; depends=[amap boot]; }; - ImpulseDE2 = derive2 { name="ImpulseDE2"; version="1.11.0"; sha256="0b5qaivc528bpimfk19qabsl8fmdfvq61yk1ip2dywf2qaryy3kx"; depends=[Biobase BiocParallel circlize ComplexHeatmap cowplot DESeq2 ggplot2 knitr Matrix S4Vectors SummarizedExperiment]; }; - InPAS = derive2 { name="InPAS"; version="1.20.0"; sha256="1jvzihfj75dfsa11gczbww395k8whaw6vryfw0q3ig1fjrqrbr71"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; - InTAD = derive2 { name="InTAD"; version="1.8.0"; sha256="09alwyy3klzigghb3gnmgf61vmfaikbzjqlgjqfzgqq916sw2yfn"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggpubr IRanges mclust MultiAssayExperiment qvalue rtracklayer S4Vectors SummarizedExperiment]; }; - IntEREst = derive2 { name="IntEREst"; version="1.12.0"; sha256="1mrnqffmmdinj6339fhb7jzl39bvmavls00gcfr8v2yzppsnf2z4"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; }; - InterMineR = derive2 { name="InterMineR"; version="1.10.0"; sha256="1klw1qz8hd21n2rz9npsjg4si43dpqh0v0jm8qklmsfbyvma17xy"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; }; - InteractionSet = derive2 { name="InteractionSet"; version="1.16.0"; sha256="1nsivm9j0mzkfhwqsa2y9gxxdbaplg4z8vn5dfvls3nrihnqpk4v"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; }; - IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.10.0"; sha256="0cybirfm3npmqnl4r6s3gw94hvbhpn16jxxpyxasmkfcnkk192ny"; depends=[FGNet igraph knitr]; }; - IsoCorrectoR = derive2 { name="IsoCorrectoR"; version="1.6.2"; sha256="10gs0ibhan7wqydxgrpbfx7c1vnhjn23xi0nf4ji164vaz51wlh3"; depends=[dplyr magrittr pracma quadprog readr readxl stringr tibble WriteXLS]; }; - IsoCorrectoRGUI = derive2 { name="IsoCorrectoRGUI"; version="1.4.0"; sha256="1r65wij834pcrajp035kpi032w9lza50216b93mbq5jqk4000bxj"; depends=[IsoCorrectoR readxl tcltk2]; }; - IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.24.0"; sha256="0984a8r9alzqcdkfz1xim7xh2xbyrlh3zmbsinpgqa76jpcz8gp2"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; - IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.10.0"; sha256="17ig0j8dyqjzbp9xskplpa2fvncdwyad02vjd10mv4h27s0g25ai"; depends=[Biostrings BSgenome DBI DEXSeq dplyr DRIMSeq edgeR futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges limma magrittr plyr RColorBrewer readr reshape2 rtracklayer stringr tximport VennDiagram XVector]; }; - JunctionSeq = derive2 { name="JunctionSeq"; version="1.17.0"; sha256="1p99792yh53pwyslpc7bv0llh0dwkk5zdagdsqmkkia6fdy226s0"; depends=[Biobase BiocGenerics BiocParallel DESeq2 genefilter geneplotter GenomicRanges Hmisc IRanges locfit plotrix Rcpp RcppArmadillo S4Vectors statmod stringr SummarizedExperiment]; }; - KCsmart = derive2 { name="KCsmart"; version="2.46.0"; sha256="12vf625ndwhqizs69xxwcvqrycksfvpz3xsii54fy4kdm4ggxlk7"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; - KEGGREST = derive2 { name="KEGGREST"; version="1.28.0"; sha256="0q76w17fya2x0z7mvyhkk5kqh07flldgih13ma44vhcy1bdlm6j1"; depends=[Biostrings httr png]; }; - KEGGgraph = derive2 { name="KEGGgraph"; version="1.48.0"; sha256="10gqcawfk3na703c3yfrkzqmk9y8ijn7af0vrjd3ny8jspwyqbv9"; depends=[graph RCurl XML]; }; - KEGGlincs = derive2 { name="KEGGlincs"; version="1.14.0"; sha256="043nhw0yjz735v6injd4axygkjy15b6a4xa3qnnzrg8qg82jg2xf"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; }; - KEGGprofile = derive2 { name="KEGGprofile"; version="1.30.0"; sha256="017zm9ciasyfqqil7wszcs1kdj6qzzcbmknm1nnp7ylsm7gdlz0y"; depends=[AnnotationDbi biomaRt ggplot2 KEGG_db KEGGREST png RCurl reshape2 TeachingDemos XML]; }; - KinSwingR = derive2 { name="KinSwingR"; version="1.6.0"; sha256="1cxj8cw5q9976wpy950ra8ghkpz1dy5zp4rf5d7hgb9kfs16pscr"; depends=[BiocParallel data_table sqldf]; }; - KnowSeq = derive2 { name="KnowSeq"; version="1.2.2"; sha256="1nh0j0i8mdq8vllwhchwc3jgpdk1jn1fxzwj70cg45rgzx1d7vkq"; depends=[Biobase caret class cqn e1071 edgeR ggplot2 gplots gridExtra Hmisc httr jsonlite kernlab limma multtest pathview praznik R_utils randomForest reshape2 rlist rmarkdown stringr sva XML]; }; - LACE = derive2 { name="LACE"; version="1.0.0"; sha256="1xkv6w4q9waqxsmj0r1p2km0y2jg04sbgz3sqpbsc46ncmzaf1zs"; depends=[igraph RColorBrewer Rfast SummarizedExperiment]; }; - LBE = derive2 { name="LBE"; version="1.56.0"; sha256="1ks7qryqqkkl0j081ip8j6k41gy2031bknpxkx0dv0g2gzsiflcc"; depends=[]; }; - LEA = derive2 { name="LEA"; version="3.0.0"; sha256="1ynzv0kdyy9sz3cf8izv47gy6nqm6znfcgsjqk7wc9xy3nn22a40"; depends=[]; }; - LINC = derive2 { name="LINC"; version="1.15.0"; sha256="0w9fildgdliq938kbiirhbs4i7nb918ggn080yh24wwya19b763s"; depends=[ape Biobase clusterProfiler DOSE ggplot2 ggtree gridExtra org_Hs_eg_db png Rcpp ReactomePA reshape2 sva]; }; - LMGene = derive2 { name="LMGene"; version="2.43.0"; sha256="1pj8kwdyb7hkj1jmng2zxmijrspjmfcysswlz4hjg0xn4xqi8kr5"; depends=[affy Biobase multtest survival]; }; - LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.14.0"; sha256="1psx9z3smc1v9mlbgnr13m2b4wz1cal5mry6fcczzs04qrg3sa0c"; depends=[CAMERA xcms]; }; - LOLA = derive2 { name="LOLA"; version="1.18.1"; sha256="04kxsgl6h7gfg9bvhy3qlkj6hzrj3g1wyl84w4b7p75j0ams0xm9"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; }; - LPE = derive2 { name="LPE"; version="1.62.0"; sha256="0f9l6zbkgqg389x4yf8v20fc1irvivjqdw1s0lr4z4rm1g71s9ln"; depends=[]; }; - LPEadj = derive2 { name="LPEadj"; version="1.48.0"; sha256="06skkc26ah4kxlvs8bmx27z5l38yp68d9dn7vbfh04gxcmc1cbi9"; depends=[LPE]; }; - LRBaseDbi = derive2 { name="LRBaseDbi"; version="1.6.0"; sha256="1dcwb1qjvyir29plkai4lslfhip4vnngkcch8n57fhvs5cgjwf27"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; - LedPred = derive2 { name="LedPred"; version="1.22.0"; sha256="0axqk5bf2wklqwvksd3pgd9filfbvs1klajcn5dwrw3yjlal0h33"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; - LineagePulse = derive2 { name="LineagePulse"; version="1.8.0"; sha256="0yiiqq3clg5h6gkwhwpqvlykssdw1vb4qs4hpxv6k5gsbyjp34ml"; depends=[BiocParallel circlize ComplexHeatmap ggplot2 gplots knitr Matrix RColorBrewer SingleCellExperiment SummarizedExperiment]; }; - LinkHD = derive2 { name="LinkHD"; version="1.2.0"; sha256="13yp4y263i3mz2qkxv76prdkpfbvfcd4jfvhjj0kak5zaz05y9n3"; depends=[cluster data_table emmeans ggplot2 ggpubr gridExtra MultiAssayExperiment reshape2 rio scales vegan]; }; - Linnorm = derive2 { name="Linnorm"; version="2.12.0"; sha256="143hdfswp5sda5al1igrm5gyn7a6mp1j7hjm5jsc300335lm3kgp"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; }; - LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.42.0"; sha256="0vsm5shnsd1j6lgmaxb6sr76r6kp58y202kj11zpziz8h4idkpbb"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; - Logolas = derive2 { name="Logolas"; version="1.11.0"; sha256="168v30xy4094xkv1k1pcja5m5gqf6737jbrvlfp4hzx75y57jcj3"; depends=[Biostrings ggplot2 gridBase LaplacesDemon SQUAREM]; }; - LoomExperiment = derive2 { name="LoomExperiment"; version="1.6.0"; sha256="0bqwvpjpidri0674rm1grdbc8fkwqdpkn7pifnvp1fmzp20rs4gl"; depends=[DelayedArray GenomicRanges HDF5Array Matrix rhdf5 rtracklayer S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; - LowMACA = derive2 { name="LowMACA"; version="1.18.0"; sha256="09kv7wfp8h3shkmq9szarjgwhmp7zfiqnvfjk3f9ykn692jxyzyq"; depends=[BiocParallel Biostrings cgdsr data_table gridBase httr LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; - LymphoSeq = derive2 { name="LymphoSeq"; version="1.16.0"; sha256="1q22r0k4aiq7cvcwb8mazm3wh9lahfhxcd7w4lgi1dm7cifwjrbd"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; }; - M3C = derive2 { name="M3C"; version="1.10.0"; sha256="0zq8lm4280p8h65i7myscwa4srs5ajh944xv6zni2f5sjyp7ij2y"; depends=[cluster corpcor doParallel doSNOW foreach ggplot2 Matrix matrixcalc Rtsne umap]; }; - M3D = derive2 { name="M3D"; version="1.22.0"; sha256="13dlb2gg08idvym1f8ccn65rn9x0v06ff7xlmghas80cz65spm1l"; depends=[BiocGenerics BiSeq GenomicRanges IRanges Rcpp S4Vectors SummarizedExperiment]; }; - M3Drop = derive2 { name="M3Drop"; version="1.14.0"; sha256="0l3gzakicn9n6fcylfzf4h8cc2v7arih9mhyi41jdalqbhycx7x4"; depends=[bbmle gplots Hmisc irlba Matrix matrixStats numDeriv RColorBrewer reldist statmod]; }; - MACPET = derive2 { name="MACPET"; version="1.8.0"; sha256="0d4g8pf7qlm0pp1zcsknhlz974q4qc5d28yiypc89yd7nhkivb1q"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; }; - MACSQuantifyR = derive2 { name="MACSQuantifyR"; version="1.2.0"; sha256="13fcrka1k1c4q7vmvpwip37midfd1ki4bkzlk4h4b4gnbff4scc0"; depends=[ggplot2 ggrepel gridExtra lattice latticeExtra png prettydoc readxl rmarkdown rvest xml2]; }; - MADSEQ = derive2 { name="MADSEQ"; version="1.14.0"; sha256="16vzh5h4iblw0xmv29zcg9pln629zjnp185zar8mxml8l0fdj4f9"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; }; - MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="1.8.0"; sha256="0n649c8nn9snxc5n11303jaqwnsa1nnhiacsah9g272pqyrymq7z"; depends=[Biobase biomaRt clusterProfiler data_table dendextend DOSE enrichplot ggplot2 ggpubr ggrepel ggsci graph gridExtra KEGGgraph KEGGREST msigdbr pathview pheatmap png scales sva XML]; }; - MAIT = derive2 { name="MAIT"; version="1.22.1"; sha256="1aqb7isy691jj0xf1jqjr000pg6jz9rg7xc5am5g8wa3p8p9sv8x"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; - MANOR = derive2 { name="MANOR"; version="1.60.0"; sha256="04kdiw2ps0y1q9ipk6zfa4fsc6viadqzkqnfmrl7jxgmsadfv3na"; depends=[GLAD]; }; - MAST = derive2 { name="MAST"; version="1.14.0"; sha256="12d0q2fbq9d5jgyccmfv0cghv282s0j86wjfbnjpdf73fdrp6brr"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr progress reshape2 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; - MBASED = derive2 { name="MBASED"; version="1.22.0"; sha256="00mqcjb1hi9yvirqaw5kgg3qc030wr2ingfl102flv640kkv07ig"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; - MBAmethyl = derive2 { name="MBAmethyl"; version="1.22.0"; sha256="0zn93lwjk281iqxc6xs96ljqdg2y3kyzhv7mjwk3l18b64l3xq4n"; depends=[]; }; - MBCB = derive2 { name="MBCB"; version="1.42.0"; sha256="1kbky7krjz1h4bqc6n2xcsnpzlz7893v3zrh9xmd40d6s7vh2s1d"; depends=[preprocessCore tcltk2]; }; - MBQN = derive2 { name="MBQN"; version="2.0.3"; sha256="04hr2ynrqrx13l1cfw8cf4hrkps5zynx6kizi0vds2b1hrmc840g"; depends=[BiocFileCache ggplot2 limma PairedData preprocessCore rappdirs RCurl rpx SummarizedExperiment xml2]; }; - MBttest = derive2 { name="MBttest"; version="1.16.0"; sha256="1ff4xpaj8kxcvzv15cc0jkhyh50hab44zhyjdrnsq4rz9zzrz9x6"; depends=[gplots gtools]; }; - MCbiclust = derive2 { name="MCbiclust"; version="1.12.0"; sha256="1283kaxj4874alcqv5crc2a3kp75hx93mhdza8lr4c83mfl58izd"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; }; - MDTS = derive2 { name="MDTS"; version="1.8.0"; sha256="1vg2sriwkkqc1d7s4lj4rf96aj3shj7vfrkzmrhw1crswp10x3kk"; depends=[Biostrings DNAcopy GenomicAlignments GenomicRanges IRanges Rsamtools stringr]; }; - MEAL = derive2 { name="MEAL"; version="1.18.0"; sha256="17h6hr30vkyknkkc90l9ns5xq3kwpaj22izi7wh8hl43g58yka2a"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SummarizedExperiment vegan]; }; - MEAT = derive2 { name="MEAT"; version="1.0.4"; sha256="19bbhyjdkhimqm079m0dp9v1ri4r324rijl3656555x3hzgraal3"; depends=[dplyr dynamicTreeCut glmnet impute minfi RPMM stringr SummarizedExperiment tibble wateRmelon]; }; - MEB = derive2 { name="MEB"; version="1.2.0"; sha256="0yjw3mpk3cjya2vwx5c6zpnq8bwd2b7knirqml1lnm0p1qxgixlc"; depends=[e1071 SummarizedExperiment]; }; - MEDIPS = derive2 { name="MEDIPS"; version="1.40.0"; sha256="14y2ybanmvcxac86wfnhnq4mwjfmsqypg1n5a77rnhac5j0z1v88"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; - MEDME = derive2 { name="MEDME"; version="1.48.0"; sha256="1fdb2r8nvfjsyk526lybfyah0fg0sbirm0am4gwjb19w9yxvq4lm"; depends=[Biostrings drc MASS]; }; - MEIGOR = derive2 { name="MEIGOR"; version="1.22.0"; sha256="0m6x263a3cvaps6fpm78yrbv7c1qlr7n9njiphm1szsxa6fmzcw8"; depends=[CNORode deSolve Rsolnp snowfall]; }; - MGFM = derive2 { name="MGFM"; version="1.22.0"; sha256="0vz5yq3i8zz2igh8z8fvbbn5bb1hxp64ygnkj39mbsa03c4nq553"; depends=[annotate AnnotationDbi]; }; - MGFR = derive2 { name="MGFR"; version="1.14.0"; sha256="0d0l5awppjijfl39p9mrbwwpv6bcbnjk50qzkjsyd486iklnlxsx"; depends=[annotate biomaRt]; }; - MIGSA = derive2 { name="MIGSA"; version="1.12.0"; sha256="05qzqf92wxaz1w34zjzqskb5ssawrc0d3fn9xhvanpxcp4h5pmls"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase ismev limma matrixStats org_Hs_eg_db RBGL reshape2 Rgraphviz RJSONIO vegan]; }; - MIMOSA = derive2 { name="MIMOSA"; version="1.26.0"; sha256="0sfz5g8ryf88mnz4qr81285gipmprrgarr6lcyf4h0vc11qw4jdp"; depends=[Biobase coda data_table dplyr Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape rlang scales testthat tidyr]; }; - MIRA = derive2 { name="MIRA"; version="1.10.0"; sha256="0hiclqmd6dvrn4jpa7avshk5l7ppywzz6f69w47wi3dqzp45nn41"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; }; - MLInterfaces = derive2 { name="MLInterfaces"; version="1.68.0"; sha256="0x3mnvb5a6kri4q5w0wfmx02v79my08zhmkaik9pqlprd7y5wynq"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer Rcpp rpart sfsmisc shiny threejs]; }; - MLP = derive2 { name="MLP"; version="1.36.0"; sha256="04ywvj9296135a9n2rq8nkgzvdgj2c9h7rxwpy06y1gddspjqbln"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; - MLSeq = derive2 { name="MLSeq"; version="2.6.0"; sha256="0wzcp2yy8xhywilq91ik9ab54w8p5gm1z2nwasfdbfzkgz689yq1"; depends=[Biobase caret DESeq2 edgeR foreach ggplot2 limma plyr sSeq SummarizedExperiment xtable]; }; - MMAPPR2 = derive2 { name="MMAPPR2"; version="1.2.0"; sha256="0m5j3dxfyqk3vdwypq5sv2ishxi1zskk4qhcflngda0c6q0908gk"; depends=[Biobase BiocGenerics BiocParallel data_table dplyr ensemblVEP GenomeInfoDb GenomicRanges gmapR IRanges magrittr Rsamtools S4Vectors stringr tidyr VariantAnnotation VariantTools]; }; - MMDiff2 = derive2 { name="MMDiff2"; version="1.16.0"; sha256="0wd95qf50qh97vjrpz5qgmj1cbqyr6dgif0ajgmgf91p8sags6jf"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; - MMUPHin = derive2 { name="MMUPHin"; version="1.2.0"; sha256="08gclvqjirxw2nyizk9awzhrqqhgxrxk0h210kn56d804xv0az0c"; depends=[cowplot dplyr fpc ggplot2 igraph Maaslin2 metafor tidyr]; }; - MODA = derive2 { name="MODA"; version="1.14.0"; sha256="1smi206qm2mlmj889cx137ral10nq3va9ng33z1gm89pa5xbfrcq"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; }; - MOFA = derive2 { name="MOFA"; version="1.4.0"; sha256="0wjc3k9bqdjrwa25a430rb2sh7bj4s692hmd7iy01wcph7nhaq4g"; depends=[Biobase corrplot cowplot doParallel dplyr foreach GGally ggbeeswarm ggplot2 ggrepel MultiAssayExperiment pheatmap RColorBrewer reshape2 reticulate rhdf5 scales]; }; - MOMA = derive2 { name="MOMA"; version="1.0.2"; sha256="1rdw3yafr9f9dr6iwb8dlh5yfi9cppvx2l1h6zc20p31df9qwy81"; depends=[circlize cluster ComplexHeatmap dplyr ggplot2 magrittr MKmisc MultiAssayExperiment qvalue RColorBrewer readr reshape2 rlang stringr tibble tidyr]; }; - MOSim = derive2 { name="MOSim"; version="1.2.0"; sha256="063aspwbqhcf578qi5ryj3fzrr8wby14r40vxb1ckx7ca3pcxvxw"; depends=[Biobase dplyr ggplot2 HiddenMarkov IRanges lazyeval matrixStats purrr rlang S4Vectors scales stringi stringr tibble tidyr zoo]; }; - MPFE = derive2 { name="MPFE"; version="1.24.1"; sha256="0b7a5ncdcfpwbnhiqnra1q2y8qj62lcxr1hsjgxr27jfxdzns3g1"; depends=[]; }; - MPRAnalyze = derive2 { name="MPRAnalyze"; version="1.6.0"; sha256="1sc62bk6dp6c34a9q5x5j1a81s4jrxrrkj56348581k56i6rlk0i"; depends=[BiocParallel progress SummarizedExperiment]; }; - MSGFgui = derive2 { name="MSGFgui"; version="1.22.0"; sha256="16s4zlps57sjkdkm1gkx8ypmpvl7dcngiv82m944mrvsk3xkac54"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; - MSGFplus = derive2 { name="MSGFplus"; version="1.22.0"; sha256="14g2wf4h8qsldv2s07viizq37q6r7fnb31hb2qkyynx1hxyw1f7d"; depends=[mzID ProtGenerics]; }; - MSnID = derive2 { name="MSnID"; version="1.22.0"; sha256="0dwa6j2nqb3223a8g4f453aznjh69wngrpvdi12iy69j1psbbjcc"; depends=[Biobase data_table doParallel dplyr foreach iterators MSnbase mzID mzR ProtGenerics R_cache Rcpp reshape2]; }; - MSnbase = derive2 { name="MSnbase"; version="2.14.2"; sha256="17vlv9gh41s1hp043b7j1jfqiw52alh1misjzy1kxl0g90rld00l"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant MASS mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp S4Vectors scales vsn XML]; }; - MSstats = derive2 { name="MSstats"; version="3.20.3"; sha256="05s2nakl93p5hanb7lf34k3dv9m6jlbx6dqjmf272p3x3w9v7mkl"; depends=[broom data_table doSNOW dplyr foreach ggplot2 ggrepel gplots limma lme4 marray MASS minpack_lm preprocessCore purrr reshape2 snow statmod stringr survival tidyr]; }; - MSstatsQC = derive2 { name="MSstatsQC"; version="2.6.0"; sha256="1nbr01ybx4a764w5hfgpyzhp893lcajrwansxl9sarfj600xl50i"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics]; }; - MSstatsQCgui = derive2 { name="MSstatsQCgui"; version="1.8.0"; sha256="11dawln2v70m0x6n5ybkpnb1xz2jzvx4440s33s87algnsgaiy5s"; depends=[dplyr ggExtra gridExtra MSstatsQC plotly shiny]; }; - MSstatsSampleSize = derive2 { name="MSstatsSampleSize"; version="1.2.0"; sha256="1nz70ixbb948izqziip1hla83kzj386y1czinf7af71x7ic8hw77"; depends=[BiocParallel caret ggplot2 gridExtra MSstats reshape2]; }; - MSstatsTMT = derive2 { name="MSstatsTMT"; version="1.6.6"; sha256="0dq5bcbz2x1l07xwrhay044vkii31jcy641cl6zgbjvplljqcnp1"; depends=[data_table dplyr ggplot2 limma lme4 lmerTest matrixStats MSstats reshape2 statmod tidyr]; }; - MVCClass = derive2 { name="MVCClass"; version="1.62.0"; sha256="0vjw6dr7h0d71jknxwlm34xrgp7nm5y8mir5l4qqa5bnn148qzqk"; depends=[]; }; - MWASTools = derive2 { name="MWASTools"; version="1.12.0"; sha256="0v9rwhalsv4kiwqcbcrhhx17flgpqcvkkpv0z8gm4f867pdsln0a"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; }; - Maaslin2 = derive2 { name="Maaslin2"; version="1.2.0"; sha256="1jickmbz84z25klg5bhq5p1vr45j0gd9ifzrki4wvqjbi69pp3wl"; depends=[biglm car chemometrics cplm data_table dplyr edgeR ggplot2 hash lmerTest logging lpsymphony MASS metagenomeSeq MuMIn optparse pbapply pcaPP pheatmap pscl robustbase vegan]; }; - MantelCorr = derive2 { name="MantelCorr"; version="1.58.0"; sha256="063nszp9qp796vjqcb3kzf4d2ppi29y7n8xs3pixidgby1z47qfd"; depends=[]; }; - MassArray = derive2 { name="MassArray"; version="1.40.0"; sha256="1yzdd77xp38z8z3c298gikmwabdgdklznmpb9fisqgy856bgf8rl"; depends=[]; }; - MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.54.0"; sha256="0nv1r68g7f1rps6sqaccd4n4x0i19wklvyabhp4b03cdk22gl3nq"; depends=[waveslim]; }; - MatrixGenerics = derive2 { name="MatrixGenerics"; version="1.0.2"; sha256="10yj56frkh9rf6bhxdb0kpcg55id9aczqjh6d5bxb6xmwrq1qwf1"; depends=[matrixStats]; }; - MatrixRider = derive2 { name="MatrixRider"; version="1.20.0"; sha256="0jm042y1xynpsjzy3idl4sb2h2zjvr352f7x3slrw3l02i71lz0d"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; - MaxContrastProjection = derive2 { name="MaxContrastProjection"; version="1.11.0"; sha256="01lf1nfni5219n158vn973wpqp0djhk5lifr23dk1dxxwn0fnnjw"; depends=[EBImage]; }; - MeSHDbi = derive2 { name="MeSHDbi"; version="1.24.0"; sha256="0kly4x4af64cij2avp3az3bdib762b32y71k3bfwxbp2g12pixdc"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; - MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.60.0"; sha256="0br7s5ixwm0pknm8dzlhbh9y6pplyhwf11lf8cf1izb0yd16yswb"; depends=[]; }; - Melissa = derive2 { name="Melissa"; version="1.4.1"; sha256="0ajy7zc2xsf4n27ddc3lf70hazja5m03cgz6qrl370cghh52x66g"; depends=[assertthat BiocStyle BPRMeth cowplot data_table doParallel foreach GenomicRanges ggplot2 magrittr matrixcalc mclust MCMCpack mvtnorm ROCR truncnorm]; }; - MergeMaid = derive2 { name="MergeMaid"; version="2.59.0"; sha256="010ilmjg69lzqm8zv19d497hk5y7sfxrx6kgswi70d4hv0az6agc"; depends=[Biobase MASS survival]; }; - Mergeomics = derive2 { name="Mergeomics"; version="1.16.0"; sha256="173yvwjvd1gzys2bmv4mnh5dywimghgzhqqqixv32fqc94ijzjg7"; depends=[]; }; - MetCirc = derive2 { name="MetCirc"; version="1.18.0"; sha256="0zk5i0f8wvsrxbx96p10rlxfc9dvhpks18c6h4hnpznb3x7i6vag"; depends=[amap circlize ggplot2 MSnbase S4Vectors scales shiny]; }; - MetID = derive2 { name="MetID"; version="1.6.0"; sha256="1mhdp6ayc17bi9r9kbxhkp929x8bvr7pcr4m4j6sxnl0pzyfg3i0"; depends=[ChemmineR devtools igraph Matrix stringr]; }; - MetNet = derive2 { name="MetNet"; version="1.6.0"; sha256="1lk14wq63a872akbndc7bhhqmc25vzcxw6s9k4xg0xxbxi59mvjn"; depends=[BiocParallel bnlearn GENIE3 mpmi parmigene ppcor sna stabs]; }; - MetaCyto = derive2 { name="MetaCyto"; version="1.10.0"; sha256="1bb4zqkpdjw394pcg7f592xh18yjl852njmj9d68bpfqfxbbs9ld"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; }; - MetaNeighbor = derive2 { name="MetaNeighbor"; version="1.8.0"; sha256="11xc3g5mx10v24sa3i2000z30g4gx677ah9fbmaqd0r8zzh6c9r0"; depends=[beanplot GenomicRanges gplots Matrix matrixStats RColorBrewer Rcpp SummarizedExperiment]; }; - MetaVolcanoR = derive2 { name="MetaVolcanoR"; version="1.2.0"; sha256="0mx57dn7qqz1wsb31fqmgzsqk0n7g5hqb8yxqa7v40v89p447mfb"; depends=[cowplot data_table dplyr ggplot2 htmlwidgets metafor metap plotly rlang tidyr topconfects]; }; - Metab = derive2 { name="Metab"; version="1.22.0"; sha256="1jk2j1922wzbg1wb22jy2iv70fd3ylwkb69rmh5783sc169xga5c"; depends=[pander svDialogs xcms]; }; - MetaboSignal = derive2 { name="MetaboSignal"; version="1.18.0"; sha256="1dgl03l8v4adls44i1s5ax1nif787ypfj1y1842rw8yllaw1q2yp"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; }; - MethCP = derive2 { name="MethCP"; version="1.2.0"; sha256="1jnmmyffmniqhxl5fvh7s05pi7s2d8jhczh15bc7icfs6i1yly5d"; depends=[BiocParallel bsseq DNAcopy DSS GenomeInfoDb GenomicRanges IRanges methylKit S4Vectors]; }; - MethPed = derive2 { name="MethPed"; version="1.16.0"; sha256="17qxmfgdm9v2y2n171k5x4ij25w8dc62ifl6hj97jyvi97rxxfq9"; depends=[Biobase randomForest]; }; - MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.20.0"; sha256="0bvnx5nk69bdmb57bd3hhnjl79hxgbpdinz1n3711g0qr2g0xnbs"; depends=[Biostrings gplots seqinr stringr]; }; - MethylAid = derive2 { name="MethylAid"; version="1.22.0"; sha256="0k206bp2kympda9k8s5nkvh362rk3mjfygj9m3q072y65kyih549"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; }; - MethylMix = derive2 { name="MethylMix"; version="2.18.0"; sha256="1xq9i8b1hkm2ajgz0rd39kf52ld6r5hm2kml0gzp2px2b7fj3hh3"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; }; - MethylSeekR = derive2 { name="MethylSeekR"; version="1.28.0"; sha256="1pwkr5mpfs8vlczdkskibykg2s72vxibnnbs5mcgaraq908231a7"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; - Mfuzz = derive2 { name="Mfuzz"; version="2.48.0"; sha256="0kdhraa5xvaywrhk6i0dsklanjr6zbn08ls4l7fh12i5d0ww1fnl"; depends=[Biobase e1071 tkWidgets]; }; - MiChip = derive2 { name="MiChip"; version="1.42.0"; sha256="07d4cy4c0hk9jp6i03plq4g8vh4bwrhh9ld7zphvkc16my06sisf"; depends=[Biobase]; }; - MiPP = derive2 { name="MiPP"; version="1.60.0"; sha256="19xflq3ydcp1zsrgcym9s91nijgvm85br6qakym99x4a0brrqcvg"; depends=[Biobase e1071 MASS]; }; - MiRaGE = derive2 { name="MiRaGE"; version="1.30.0"; sha256="0533v0vsx1m9jbdbbdzl02szr6dhyjar7h6pvh99k403qy63hzvw"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager S4Vectors]; }; - MicrobiotaProcess = derive2 { name="MicrobiotaProcess"; version="1.0.5"; sha256="0vvyqvjpln01433s4s5gjf1hcpn2i1ibji4b6iddb800lkd8mwkn"; depends=[ape biomformat Biostrings coin DECIPHER dplyr ggplot2 ggrepel ggsignif ggtree gtools magrittr MASS patchwork phangorn phyloseq plyr randomForest rentrez reshape rlang Rmisc scales tibble tidyr tidytree vegan yaml zoo]; }; - MineICA = derive2 { name="MineICA"; version="1.28.0"; sha256="031blxwfj27f9qy83b2qd3yxmx0kvhg3zhbsaqsyfn0dy7pa3mk8"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; - MinimumDistance = derive2 { name="MinimumDistance"; version="1.32.0"; sha256="13qxzhc6wy18ag9v1klhhn75q4m115x9h3wsssr4d37dmhn9j11r"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; - Mirsynergy = derive2 { name="Mirsynergy"; version="1.23.0"; sha256="0xack1xmhbsadv58pizprhzgfpn1vg8g1j7vc2yinywjwmydsvfm"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; }; - MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.37.0"; sha256="0f2h9q3knw6qpb285j854agvg0yidvr9flb1js8gz4wc2g8x099f"; depends=[Biobase lattice limma statmod vsn xtable]; }; - MoPS = derive2 { name="MoPS"; version="1.21.0"; sha256="0d67c8d6v8p5cx5vbrh8r2isq3pn52wf23r2p2qpkfsrrkyjl0q2"; depends=[Biobase]; }; - Modstrings = derive2 { name="Modstrings"; version="1.4.1"; sha256="1whz9jx51dp4950cpmsk3c58lkzv7b0grmn6q6ariw2ynv3rzkfp"; depends=[BiocGenerics Biostrings crayon GenomicRanges IRanges S4Vectors stringi stringr XVector]; }; - MoonlightR = derive2 { name="MoonlightR"; version="1.14.1"; sha256="182hngm4fyb2m4j3v31qz0xm6mxzpb7ryyy3d5lgnbh8ch7w61k4"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; - MotIV = derive2 { name="MotIV"; version="1.43.0"; sha256="1yqqymcrnwlpv6h3w80yliv19922g32xqlqszaqjk6zp853qilh6"; depends=[BiocGenerics Biostrings GenomicRanges IRanges lattice rGADEM S4Vectors]; }; - MotifDb = derive2 { name="MotifDb"; version="1.30.0"; sha256="0ixmdqp0s0xv9ar85n2wirbbssrzlk8a892wam55jdsf9y8aabkm"; depends=[BiocGenerics Biostrings GenomicRanges IRanges rtracklayer S4Vectors splitstackshape]; }; - MsCoreUtils = derive2 { name="MsCoreUtils"; version="1.0.0"; sha256="0y172ahcq6nyrwzcpay22ldgwysh7yxxqbm8bzaylpyvln1mvgnq"; depends=[MASS Rcpp S4Vectors]; }; - Mulcom = derive2 { name="Mulcom"; version="1.38.0"; sha256="1qjlbxxzl9xxpa7pwn9cmh9b38kzlk6nyk5axlv900nwh2cf8q34"; depends=[Biobase fields]; }; - MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.14.0"; sha256="0qlfnd86999jqv2nd0ikixi2sfd449dyg3ml4nbs8ycs57c2irgh"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment tidyr]; }; - MultiDataSet = derive2 { name="MultiDataSet"; version="1.16.0"; sha256="0hjnj32m9wwlh2krdpdyl5jk1cakvlgki80z51mabhc62pajzf39"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; }; - MultiMed = derive2 { name="MultiMed"; version="2.10.0"; sha256="0lblnr9c587v16mrk0fz9im9qmz97q9c8cbdl734gaq05y2nsj31"; depends=[]; }; - MutationalPatterns = derive2 { name="MutationalPatterns"; version="2.0.0"; sha256="02lyjiabyhmifycksvpcx29a0pb7z9xjw0hgg8n0sd0dy3afqhcm"; depends=[BiocGenerics Biostrings cowplot GenomeInfoDb GenomicRanges ggdendro ggplot2 IRanges NMF plyr pracma reshape2 S4Vectors SummarizedExperiment VariantAnnotation]; }; - NADfinder = derive2 { name="NADfinder"; version="1.12.0"; sha256="1np3ss5qva479gm97mixqpf353b0yc44xwff04pyqav1qhfqcw32"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; - NBAMSeq = derive2 { name="NBAMSeq"; version="1.4.1"; sha256="0hz1nkfya25n1k2q8zjdjj2dy54aivb1mnchv9wfxs0mk6vwxkgg"; depends=[BiocParallel DESeq2 genefilter mgcv S4Vectors SummarizedExperiment]; }; - NBSplice = derive2 { name="NBSplice"; version="1.6.0"; sha256="1lbk3df1lk51abcjrpcc13bhblgxkq77dhyrfg93hs9bib2ka40b"; depends=[BiocParallel car edgeR ggplot2 MASS mppa reshape2]; }; - NCIgraph = derive2 { name="NCIgraph"; version="1.36.0"; sha256="029izgilsf5r7wnnm6mpb6qcfn1bpz4avj6wgr4zjnl1gfix5kjf"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; }; - NOISeq = derive2 { name="NOISeq"; version="2.31.0"; sha256="0lg3za0km6v9l6dxigbxx6nsx9y6m3dyzh9srngi53s8387vhj33"; depends=[Biobase Matrix]; }; - NPARC = derive2 { name="NPARC"; version="1.0.1"; sha256="01hnyyhysp4aqcz19kbvjwg7gzh5lr13p7m8hvkiigg7ssk2ya9m"; depends=[BiocParallel broom dplyr magrittr MASS rlang tidyr]; }; - NTW = derive2 { name="NTW"; version="1.38.0"; sha256="1ja09axddsj23klkp5bqxrmav9mikc2lzdldrg07is03pdfbx9sb"; depends=[mvtnorm]; }; - NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.18.0"; sha256="0d4p68lvgvf10bzdvixnpk8c64glbgd249izwawv3i651277398i"; depends=[Biobase matrixStats Rcpp]; }; - NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.20.0"; sha256="1s2y7mqav9za0wq1khsllvw87nmdjzc01jjmr52symdq5523y479"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; - NarrowPeaks = derive2 { name="NarrowPeaks"; version="1.31.0"; sha256="1a1rdnnyvi1yy8ikki1mvzk24hyyqx9y7xh03lf5zm9qx4jas5qw"; depends=[BiocGenerics CSAR fda GenomeInfoDb GenomicRanges ICSNP IRanges S4Vectors]; }; - NeighborNet = derive2 { name="NeighborNet"; version="1.6.0"; sha256="19wa24fb4b4rxyyvzb06psfpmzb580h0m659fmf12qkz0n9g41jx"; depends=[graph]; }; - NetPathMiner = derive2 { name="NetPathMiner"; version="1.24.0"; sha256="1m9m2g8b6y5s1mqpx4avny200g8hidrqa1qrvzq2fz7q89g5apxy"; depends=[igraph]; }; - NetSAM = derive2 { name="NetSAM"; version="1.28.0"; sha256="0lqdhgxk044c66w0ahqs3w06p1hlcc7srqg6486qypjqrpa6fznj"; depends=[graph igraph seriation]; }; - NoRCE = derive2 { name="NoRCE"; version="1.0.0"; sha256="1q9ncgqxc846sl6p5nws1i6c4i4x9qcg73n570ydnn7wq8g1i8dh"; depends=[AnnotationDbi biomaRt DBI dbplyr dplyr GenomicFeatures GenomicRanges ggplot2 GO_db igraph IRanges KEGGREST png RCurl reactome_db readr reshape2 RSQLite rtracklayer rWikiPathways S4Vectors SummarizedExperiment tidyr zlibbioc]; }; - NormalyzerDE = derive2 { name="NormalyzerDE"; version="1.6.0"; sha256="1ijgljwi547n4b4z77h3rx7pfapkgzxzbaia44dgl0433sjcfyj5"; depends=[ape Biobase car ggforce ggplot2 limma MASS matrixStats preprocessCore raster RcmdrMisc SummarizedExperiment vsn]; }; - NormqPCR = derive2 { name="NormqPCR"; version="1.34.0"; sha256="0aq9gf490vf7ish33lq8ydbiscxbqbcbgvf0x1f4kgbps0bz46y2"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; - NuPoP = derive2 { name="NuPoP"; version="1.38.0"; sha256="08y123zyl2hp3jivz485699s0k0g7ldmq5gzy2l0bl87hk9fpyb4"; depends=[]; }; - OCplus = derive2 { name="OCplus"; version="1.62.0"; sha256="18cy2rm4xrlmzmvl7qskamd88fkd1d5ymayhhzf7afskmn3ssnnk"; depends=[akima multtest]; }; - OGSA = derive2 { name="OGSA"; version="1.17.0"; sha256="1a5q3w5ca7ji6l1cydj7rbnjh3jayznmxmsaf9g9ji4pyh90bba7"; depends=[Biobase gplots limma]; }; - OLIN = derive2 { name="OLIN"; version="1.66.0"; sha256="0knmjnsdm264n072gn2smcq519gnykdiypppsmkqsg9mkaq3nyd7"; depends=[limma locfit marray]; }; - OLINgui = derive2 { name="OLINgui"; version="1.62.0"; sha256="05si2bln02mhczwvqsz2m5g46f511p226lfcddsxsy19qq301jdc"; depends=[marray OLIN tkWidgets widgetTools]; }; - OMICsPCA = derive2 { name="OMICsPCA"; version="1.6.0"; sha256="0d3h3lpy0k099ja59sqjr5ca3czk20qf0nlzslnh4d5vlp60z7vh"; depends=[cluster clValid corrplot cowplot data_table factoextra FactoMineR fpc GenomeInfoDb ggplot2 HelloRanges IRanges kableExtra magick MASS MultiAssayExperiment NbClust OMICsPCAdata pdftools PerformanceAnalytics reshape2 rgl rmarkdown rtracklayer tidyr]; }; - OPWeight = derive2 { name="OPWeight"; version="1.10.0"; sha256="1plhy2klsl104vxqhd3yf87w0r5075vhq59p248b8100hl9vjg10"; depends=[MASS qvalue tibble]; }; - ORFik = derive2 { name="ORFik"; version="1.8.6"; sha256="13km1084prm49ydizkic97qxhi44z75dfy6qv7h5gfljqk791mw8"; depends=[AnnotationDbi BiocGenerics BiocParallel biomartr Biostrings cowplot data_table DESeq2 fst GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra IRanges R_utils Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - OSAT = derive2 { name="OSAT"; version="1.36.0"; sha256="0j5qhsla3b4sfhd5i8pn1mn1zj885x88mpc421r33mw259i7a8r6"; depends=[]; }; - OTUbase = derive2 { name="OTUbase"; version="1.38.0"; sha256="12ysm7fhkpi0jza71a48jkllf4dz11g13712ciprqnxqr93afs7n"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; - OUTRIDER = derive2 { name="OUTRIDER"; version="1.6.1"; sha256="1y2rvz29inrg6f394an228k122nv753nxdwqrjrwxaxmwxhm32fa"; depends=[BBmisc BiocGenerics BiocParallel data_table DESeq2 generics GenomicFeatures GenomicRanges ggplot2 heatmaply IRanges matrixStats pcaMethods pheatmap plotly plyr PRROC RColorBrewer Rcpp RcppArmadillo reshape2 S4Vectors scales SummarizedExperiment]; }; - OVESEG = derive2 { name="OVESEG"; version="1.4.0"; sha256="02skny8ndwm1afm7sb1g64l78vx64yi02f7isc3rcbcfdkpzsf8f"; depends=[BiocParallel fdrtool limma Rcpp SummarizedExperiment]; }; - OmaDB = derive2 { name="OmaDB"; version="2.4.0"; sha256="0flvx8bai79j4krlmhjmgvbwmgk9w10f1h0k9dzhdz104csgpbmw"; depends=[ape Biostrings GenomicRanges httr IRanges jsonlite plyr topGO]; }; - OmicCircos = derive2 { name="OmicCircos"; version="1.26.0"; sha256="062m61f69fs2ld11g27pwpwm6vri19i447spi2lac458wkn0hq00"; depends=[GenomicRanges]; }; - OmicsLonDA = derive2 { name="OmicsLonDA"; version="1.4.0"; sha256="1wpjahylrsqi7xjvbjwfrmlv9ybfy9yibmypkznf093gr36b5dw6"; depends=[BiocGenerics BiocParallel ggplot2 gss plyr pracma SummarizedExperiment zoo]; }; - OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.19.0"; sha256="13610jgrh432vnssx5yc711ypj4c2fhajd5d6igjyl4mw687pq76"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; }; - OmnipathR = derive2 { name="OmnipathR"; version="1.2.1"; sha256="0b3qk9a0kl5msz2l9aydypwq39q76gp4mr2lzjgq5fcd94x0j078"; depends=[dplyr igraph rlang]; }; - Onassis = derive2 { name="Onassis"; version="1.10.0"; sha256="0i0znkyz3q2skbz0bnhwmnxbw7q6b294z70s4yqfz2ls8w8hfiz6"; depends=[AnnotationDbi clusteval data_table dendextend DT GEOmetadb ggfortify ggplot2 knitr OnassisJavaLibs RCurl rJava RSQLite Rtsne]; }; - OncoScore = derive2 { name="OncoScore"; version="1.16.0"; sha256="17hm73skzqij4y5z6m5c27jf8wpm0qsl5qs34a5f8da4za0r5iw6"; depends=[biomaRt]; }; - OncoSimulR = derive2 { name="OncoSimulR"; version="2.18.0"; sha256="1pb7gscx2dr9q6l33b7x6ikqwz8v3zhhvxrya5450sapg4sdvabq"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph RColorBrewer Rcpp Rgraphviz smatr]; }; - OpenStats = derive2 { name="OpenStats"; version="1.0.2"; sha256="0ndlb35i4yvvdnzk7limbsgnh4nbq922h5g91w5lzjg34gmsa89j"; depends=[AICcmodavg car Hmisc jsonlite knitr MASS nlme rlist summarytools]; }; - OrderedList = derive2 { name="OrderedList"; version="1.60.1"; sha256="18jgv2zv9w6kvxivmx0iz87dggrcz9fj4ibr2x0yk1c4pq28hf23"; depends=[Biobase twilight]; }; - Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.16.0"; sha256="1f0wzg6klr9kw5h7b82sxz727zh5vg9ka6m85y1c5886hcwndnw7"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges RSQLite S4Vectors tibble]; }; - OrganismDbi = derive2 { name="OrganismDbi"; version="1.30.0"; sha256="194h5576inq44qr666snzq0ygnc77rk5ljkn9bn8zs6x6gb3cwaw"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; }; - Oscope = derive2 { name="Oscope"; version="1.18.0"; sha256="09w47glvfcil6cc55f26ndvgmw1rdmzbp4bdyv4cmwcl41hdci7j"; depends=[BiocParallel cluster EBSeq testthat]; }; - OutlierD = derive2 { name="OutlierD"; version="1.52.0"; sha256="0qhw5zr3d5dxa1mcqhzbamgzydk27zd009laibh3c4nn5107p7f9"; depends=[Biobase quantreg]; }; - PAA = derive2 { name="PAA"; version="1.22.0"; sha256="1g15f0f84r8fdlq1ifbypzg25jv4sa30r0w8l5c5a5qvi902hlsc"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; - PADOG = derive2 { name="PADOG"; version="1.30.0"; sha256="1zgyr3arzmc54h19jcq7rs883n63fkgjqn4z8g41rlfgmhzynk0a"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGGdzPathwaysGEO KEGGREST limma nlme]; }; - PAIRADISE = derive2 { name="PAIRADISE"; version="1.4.1"; sha256="1cdmps7k9vdp3j00fqvp3d4iyrav78db8fzxy8b6wbs2s35vpl59"; depends=[abind BiocParallel nloptr S4Vectors SummarizedExperiment]; }; - PANR = derive2 { name="PANR"; version="1.34.0"; sha256="12dan58ccd677rb75dsvvd7lhbzdydfz7fwzgafc4kiixnhdxcrh"; depends=[igraph MASS pvclust RedeR]; }; - PAST = derive2 { name="PAST"; version="1.4.3"; sha256="1n2gk4b6lyxnrmyh0w4sp2xjg6dnvwn6fsyaddj0j566kmss359z"; depends=[doParallel dplyr foreach GenomicRanges ggplot2 iterators qvalue rlang rtracklayer S4Vectors]; }; - PCAN = derive2 { name="PCAN"; version="1.16.0"; sha256="1wr5djwfgyp7703s5kk2zd7x6x40933q06cq3ljzq0wqb6val9ir"; depends=[BiocParallel]; }; - PCAtools = derive2 { name="PCAtools"; version="2.0.0"; sha256="0mnwqrhm1hmhzwrpidf6z207w1ycpm572snvpp5swlg6hnxq6bnc"; depends=[beachmat BH BiocParallel BiocSingular cowplot DelayedArray DelayedMatrixStats dqrng ggplot2 ggrepel lattice Matrix Rcpp reshape2]; }; - PCpheno = derive2 { name="PCpheno"; version="1.50.0"; sha256="1wgvq9hvbnr01rbkigs43lky7bh5vcz3ixqlq0w5dwsgkklxwfbs"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; }; - PECA = derive2 { name="PECA"; version="1.24.0"; sha256="0y84f8hnb0wx9981lawnn29v5hl2ly9jw6q1384qxmhsd1al657q"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; }; - PERFect = derive2 { name="PERFect"; version="1.2.0"; sha256="10nhmjxnplp03lq1dxk07axdf8a2c50z0s5gyiwwrws4m1732mys"; depends=[fitdistrplus ggplot2 Matrix phyloseq psych sn zoo]; }; - PGA = derive2 { name="PGA"; version="1.18.1"; sha256="07jw0kab971yv2891jcgmdv96lkqa7qnk983vcj9b2nr1rvfm7aq"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table dplyr GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap processx RCurl readr Rsamtools RSQLite rTANDEM rtracklayer S4Vectors seqinr stringr VariantAnnotation]; }; - PGSEA = derive2 { name="PGSEA"; version="1.61.0"; sha256="05dd1wrzzsfzhb3zpc1dh10dpywj2jxdwy2hiqsbzm0ybnx4cfnx"; depends=[annaffy AnnotationDbi Biobase GO_db KEGG_db]; }; - PICS = derive2 { name="PICS"; version="2.32.0"; sha256="1vyf99llhbmwih0cxmzbsq0chfdgb6q0clhmmdvy2pz8dq3clc7m"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools]; }; - PING = derive2 { name="PING"; version="2.32.0"; sha256="05b3fvlnykrqjshqngvy7w2z23h2b0bnk5hxgcpw9hbkii92kv60"; depends=[BiocGenerics BSgenome fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; - PLPE = derive2 { name="PLPE"; version="1.48.0"; sha256="10xxi8rbs9c2rgj0yw7ha29q1jwb14v2wjqhlyrl7x66cklnbk2m"; depends=[Biobase LPE MASS]; }; - POST = derive2 { name="POST"; version="1.12.0"; sha256="1nkqqz05bg046gl3qfwvhwrf1kjv5990pw8pmhg86ilwm58fpkmc"; depends=[Biobase CompQuadForm GSEABase Matrix survival]; }; - PPInfer = derive2 { name="PPInfer"; version="1.14.0"; sha256="02v8xdghn347g7x41laz80kj6gqsyw7m7bzmrh1ivsfsmrji5bfp"; depends=[biomaRt fgsea ggplot2 igraph kernlab STRINGdb yeastExpData]; }; - PREDA = derive2 { name="PREDA"; version="1.34.0"; sha256="16761angnk5xhm17kd498s6ib6lq0bwds36vy12y1klykhi8ryxr"; depends=[annotate Biobase lokern multtest]; }; - PROMISE = derive2 { name="PROMISE"; version="1.40.0"; sha256="0ai27l0yh8hz9y6zvk2dp91jz77dfff8kmkzdz2v1bm9qbi8q6gp"; depends=[Biobase GSEABase]; }; - PROPER = derive2 { name="PROPER"; version="1.20.0"; sha256="083nvw2vzl4s2w1rgi8s9i0lc4591iyanx98hqarv0hgzsa3ywi9"; depends=[edgeR]; }; - PROPS = derive2 { name="PROPS"; version="1.10.0"; sha256="17v9h7pb0wgrlahrqgp85x7g04fm7fqmlpjyfvfw3bg7cy8z3v0j"; depends=[Biobase bnlearn reshape2 sva]; }; - PROcess = derive2 { name="PROcess"; version="1.64.0"; sha256="0z7q8425va53bfawjyysly56k2l86r38nv73hdx5ivxvjc3m0pyj"; depends=[Icens]; }; - PSEA = derive2 { name="PSEA"; version="1.22.0"; sha256="0v468b6j42ncfhdwxjb6kdxpsmw3cxk61ra3pji80ipv6cqcyxaf"; depends=[Biobase MASS]; }; - PSICQUIC = derive2 { name="PSICQUIC"; version="1.26.1"; sha256="1756azhslvjx49f0f4r8d9ffk6s15j8ng31i6js45r3z2q8vmbci"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; - PWMEnrich = derive2 { name="PWMEnrich"; version="4.24.2"; sha256="0gryhcw2dn2ymxhr8cjpsdjpvgy2qjvv6z32f5wnkkd0mhzlp5m4"; depends=[BiocGenerics Biostrings BSgenome evd gdata seqLogo]; }; - PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.16.0"; sha256="0f7d0ja3yxnycczx8hyhyvkmg882r25bzp56vgrpy3i0d63skhhf"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; }; - Path2PPI = derive2 { name="Path2PPI"; version="1.18.0"; sha256="0fl5dmkvyvg00rrn07dahb62wq3c4agxn30aifb4lxficnyzf64v"; depends=[igraph]; }; - PathNet = derive2 { name="PathNet"; version="1.28.0"; sha256="0yz1miqkdq33qxccyc343bmxrpagrn1mdjd0jz7xjcpgxzb1wfc6"; depends=[]; }; - PathoStat = derive2 { name="PathoStat"; version="1.14.0"; sha256="0b3rhzcjvi0n6x46bkavgwis08jf8pld38mg3srkw1l6s65ipcaz"; depends=[ape BiocStyle ComplexHeatmap corpcor DESeq2 devtools dplyr DT edgeR ggplot2 glmnet gmodels knitr limma matrixStats phyloseq plotly plyr RColorBrewer rentrez reshape2 ROCR scales shiny shinyjs tidyr vegan webshot XML]; }; - PathwaySplice = derive2 { name="PathwaySplice"; version="1.11.0"; sha256="0645k6gipcgs4zp2yfyj9ylh358lzfcfpzh06ky2jg6dh0zilbjj"; depends=[annotate AnnotationDbi AnnotationHub BiasedUrn Biobase BiocGenerics DOSE dplyr EnrichmentBrowser ensembldb gdata geneLenDataBase GO_db goseq gplots gridExtra htmlwidgets igraph JunctionSeq KEGGREST mgcv org_Hs_eg_db org_Mm_eg_db plotly RColorBrewer reshape2 S4Vectors tibble VennDiagram webshot]; }; - PepsNMR = derive2 { name="PepsNMR"; version="1.6.1"; sha256="12fr13bn576xgqwgss0kskx695gqqiizv9j53xn55ya8r739ahl7"; depends=[ggplot2 gridExtra Matrix matrixStats ptw reshape2]; }; - PharmacoGx = derive2 { name="PharmacoGx"; version="2.0.9"; sha256="0if6jhy6jz9ph0njl8xkrvgk6lwh8jhqp29v10x8q6ydd97hgqjh"; depends=[Biobase BiocParallel caTools CoreGx downloader ggplot2 jsonlite magicaxis RColorBrewer reshape2 S4Vectors SummarizedExperiment testthat]; }; - PhenStat = derive2 { name="PhenStat"; version="2.24.0"; sha256="0yg1gpm2qz0q2x3v8yl472x16r590vh1knc9x17kjjh58fk8lr7v"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; }; - PhyloProfile = derive2 { name="PhyloProfile"; version="1.2.8"; sha256="0zlfxq2s28jfmklki6hnxfkvj88j6b0l02jgc126iy6cxgpkmppk"; depends=[ape BiocStyle bioDist Biostrings colourpicker data_table DT energy ExperimentHub ggplot2 gridExtra OmaDB pbapply plyr RColorBrewer shiny shinyBS shinyjs xml2 zoo]; }; - Pi = derive2 { name="Pi"; version="2.0.3"; sha256="1ziqnz7cxwqv7770f8lwbqgmr70z15sayrfb00izlxlyh1nqna16"; depends=[BiocGenerics caret dnet dplyr GenomeInfoDb GenomicRanges ggbio ggnetwork ggplot2 ggrepel glmnet Gviz igraph IRanges lattice MASS Matrix osfr plot3D purrr randomForest RCircos readr ROCR scales supraHex tibble tidyr]; }; - Pigengene = derive2 { name="Pigengene"; version="1.14.0"; sha256="1j32bmjksz6ywkgdqzzl60arjpcaqpf0dyz8x13xnigkj8rf2gj7"; depends=[bnlearn C50 dplyr gdata GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; - PloGO2 = derive2 { name="PloGO2"; version="1.0.0"; sha256="1cizkdp5wc6pi2cip77n2qd4lisjwckqsic82mnr9fwb41i95wwc"; depends=[GO_db GOstats httr lattice openxlsx xtable]; }; - PoTRA = derive2 { name="PoTRA"; version="1.4.0"; sha256="1kark8hn5yb0visn7r02qqy54mfw46ypdh7wnvckwnkb5dbyh5ff"; depends=[BiocGenerics graph graphite igraph org_Hs_eg_db]; }; - Polyfit = derive2 { name="Polyfit"; version="1.22.0"; sha256="1hkj2amw5flr2mzcshq96n03k9ld3786rrzhjxpyqjzv9500vjsa"; depends=[DESeq]; }; - PowerExplorer = derive2 { name="PowerExplorer"; version="1.7.0"; sha256="13mkj1syi5h3ka1yx8lc2wlxx46ggrwdab8rpvifdlpar9byqsbm"; depends=[Biobase BiocParallel data_table DESeq2 ggplot2 gridExtra MASS ROTS S4Vectors SummarizedExperiment vsn]; }; - PrInCE = derive2 { name="PrInCE"; version="1.4.0"; sha256="080y1iijc48x78f5i3rgzyb0nfsx7i046r0nrfkg7fs7680c1ky4"; depends=[Biobase dplyr forecast Hmisc LiblineaR magrittr MSnbase naivebayes progress purrr ranger Rdpack robustbase speedglm tester tidyr]; }; - PrecisionTrialDrawer = derive2 { name="PrecisionTrialDrawer"; version="1.4.0"; sha256="18yfc52i3sw622k65m6fwvxsnv3mkyxl9spc3sgdzyfkrkc3wrf0"; depends=[BiocParallel biomaRt brglm cgdsr data_table DT GenomicRanges ggplot2 ggrepel googleVis httr IRanges jsonlite LowMACAAnnotation magrittr matrixStats RColorBrewer reshape2 S4Vectors shiny shinyBS stringr XML]; }; - Prize = derive2 { name="Prize"; version="1.17.0"; sha256="01h1qra2jjwhfczzkjkmkayhbc4hy6f17b8khlyc1ca24bay5dkw"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; }; - Prostar = derive2 { name="Prostar"; version="1.20.0"; sha256="1k8c8aglp81vy7snnm4k6kv0asx840l8x1wcvpfhq3zzvdn0cap6"; depends=[BiocManager colourpicker DAPAR DAPARdata data_table DT future highcharter htmlwidgets later promises R_utils rclipboard rhandsontable sass shiny shinyAce shinyBS shinycssloaders shinyjqui shinyjs shinythemes shinyTree shinyWidgets tibble webshot XML]; }; - ProtGenerics = derive2 { name="ProtGenerics"; version="1.20.0"; sha256="14xzdh7vxss8vmrw91hcwrszdn3ikm71mah8875b2lkrkrfzbl73"; depends=[]; }; - ProteoMM = derive2 { name="ProteoMM"; version="1.6.0"; sha256="0cfy1740wx4x2pivdrj304pscgmrianr3hbbq6s1ii0rhifmdla1"; depends=[biomaRt gdata ggplot2 ggrepel gtools matrixStats]; }; - ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.18.0"; sha256="0g6ks0r2vs11cz33ib02565kqaqnkkvqkivkj9nxwr14hgx7zr5g"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; - PubScore = derive2 { name="PubScore"; version="1.0.0"; sha256="06y88680kqccgmx1s46awyy7blw002208q9jyzpkgcd1vbdl987f"; depends=[dplyr ggplot2 ggrepel igraph intergraph network progress rentrez sna]; }; - PureCN = derive2 { name="PureCN"; version="1.18.1"; sha256="10gch6q08h1rylhsi5m4m7q8ixi1fkd5i114lpzf7d0hsyzq04fp"; depends=[BiocGenerics Biostrings data_table DNAcopy futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra IRanges Matrix RColorBrewer rhdf5 Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; }; - Pviz = derive2 { name="Pviz"; version="1.22.0"; sha256="0n6gfj3ydh3qgz9d7596b983xd7hjwavh1r04w1jppjwk5azdrhm"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; - QDNAseq = derive2 { name="QDNAseq"; version="1.24.0"; sha256="1ji9pl2r1idyj3qzggj7qd2kqx31i6b3igwk2hqjb8qzkyb37p86"; depends=[Biobase CGHbase CGHcall DNAcopy future future_apply GenomicRanges IRanges matrixStats R_utils Rsamtools]; }; - QSutils = derive2 { name="QSutils"; version="1.6.0"; sha256="0b589rclng6b9wlcwshnggyy97wrbvcpdgxn926576plhlzdhkgh"; depends=[ape BiocGenerics Biostrings psych]; }; - QUBIC = derive2 { name="QUBIC"; version="1.16.0"; sha256="0xr0mvxca2fs3hmr573c9z8crk68nd59apncd6ppjhvhqh3ca7ax"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; - Qtlizer = derive2 { name="Qtlizer"; version="1.2.0"; sha256="0bc198dv2lrcs3w2jgmhrxwciq1fqqxs030jrwy54idf0635ilcr"; depends=[curl GenomicRanges httr stringi]; }; - QuartPAC = derive2 { name="QuartPAC"; version="1.20.0"; sha256="0awzg8bnw1z0hnaydjhxv4y5as9fs9yk0r99f9gkqqpk7ngqpfp3"; depends=[data_table GraphPAC iPAC SpacePAC]; }; - QuasR = derive2 { name="QuasR"; version="1.28.0"; sha256="0d87ajaaq8a7xgzl820qx5bvxw86ppab8clqk77sj02rfijnvjn8"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rhisat2 Rhtslib Rsamtools rtracklayer S4Vectors ShortRead]; }; - QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.22.0"; sha256="0rim1l1lnz2lix1gxvwig52lfnrg9yz9hd7z61hq1mzibqg1l6sa"; depends=[dplyr Rcpp yaml]; }; - R3CPET = derive2 { name="R3CPET"; version="1.20.0"; sha256="1n1cqibv3194ixb72hp118x4kqvlfp59m27x36vxdyacvqyjcsk6"; depends=[BiocGenerics clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; - R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.38.0"; sha256="0qvq18x5sc8p7zbwjpk8ps4yfbb3czbxc7kwapv7q331mmqkjl92"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; - R4RNA = derive2 { name="R4RNA"; version="1.16.0"; sha256="1f0wfyv6vjgvm2p3im5jgq7948wv5vk9kd1qc1zh3g1nnlfx4lxv"; depends=[Biostrings]; }; - RBGL = derive2 { name="RBGL"; version="1.64.0"; sha256="079599a6xn2i7snfn2vgshkw0c00rrfhj44pvi03ap8id29bkayy"; depends=[BH graph]; }; - RBM = derive2 { name="RBM"; version="1.20.0"; sha256="0cph07f1hbb7s2qjs7n2zh5ahw7vazkv4jgvbyzdkw0b82k8gb14"; depends=[limma marray]; }; - RBioinf = derive2 { name="RBioinf"; version="1.48.0"; sha256="03x025s3zvk2fm57wi1b0qwgf1x2nmlb3f63jkp04s4ndcplkbib"; depends=[graph]; }; - RCAS = derive2 { name="RCAS"; version="1.14.0"; sha256="0f812pgv3ys1zv4n9sqkgm01hj4cdd0i0h85dqbhkwd94zl6cavl"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gprofiler2 IRanges knitr pbapply pheatmap plotly plotrix proxy ranger rmarkdown RSQLite rtracklayer S4Vectors]; }; - RCASPAR = derive2 { name="RCASPAR"; version="1.34.0"; sha256="0ddy2zkp5xk4x12s0217y61im63aikb3ijy7c59karj64h8dl0nv"; depends=[]; }; - RCM = derive2 { name="RCM"; version="1.4.0"; sha256="0sq1wxr04igw13dn50ljczj6fbbisz4qkwf3dwpmbsk74pc2kfjw"; depends=[alabama edgeR ggplot2 MASS nleqslv phyloseq RColorBrewer reshape2 tensor tseries vegan VGAM]; }; - RCy3 = derive2 { name="RCy3"; version="2.8.1"; sha256="0wfqq3xiisd7rk3xsi4jymcj387yqj1944ms6akzjmnda2p9qq8d"; depends=[BiocGenerics graph httr igraph R_utils RJSONIO XML]; }; - RCyjs = derive2 { name="RCyjs"; version="2.10.0"; sha256="0mimh459rzry2gfsgry7k8wzxfpn656b7l2abmhp9v7h7g6as5zg"; depends=[base64enc BiocGenerics BrowserViz graph httpuv]; }; - RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.26.0"; sha256="1dmqszi1f5cwjphrcw98fib53c6n340avprfayd2jaxzkxlr7ylx"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; }; - RDRToolbox = derive2 { name="RDRToolbox"; version="1.38.0"; sha256="0vff12kknq0smrw34np9zn92s3vxkz13yqx1maaavpwpnhxi9d04"; depends=[MASS rgl]; }; - REBET = derive2 { name="REBET"; version="1.6.0"; sha256="0yqsymzl6mih7vhab45vnjqy8js7j65rfcz7417l0phbpcdjqny7"; depends=[ASSET]; }; - REDseq = derive2 { name="REDseq"; version="1.34.0"; sha256="1msl0bx3hz95m2gsqb6fmv76kxi2ab9kc7hdmfp4bnapi4wyzzp9"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; - REMP = derive2 { name="REMP"; version="1.12.0"; sha256="1j4iihakabykppbaf4qgg6p5x4nnwc244mqsf502f4kk8xk7lxrr"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome caret doParallel foreach GenomeInfoDb GenomicRanges impute IRanges iterators kernlab minfi org_Hs_eg_db ranger readr rtracklayer S4Vectors settings SummarizedExperiment]; }; - RGMQL = derive2 { name="RGMQL"; version="1.8.0"; sha256="1sply0027nxsfv9bp274xph6m0532c1nn4wwxyhr2qm3m3pam9bx"; depends=[BiocGenerics data_table dplyr GenomicRanges glue httr plyr RGMQLlib rJava rtracklayer S4Vectors xml2]; }; - RGSEA = derive2 { name="RGSEA"; version="1.22.0"; sha256="0f3rrji5ky1y0d15izqhmdkr0w1niyr3qp5sq4hz4zprz6glcjg9"; depends=[BiocGenerics]; }; - RGalaxy = derive2 { name="RGalaxy"; version="1.32.0"; sha256="1vh7mjd1n30v5yx45j85bx5dzxr9mbbk6v4flysjppz1r2h3hfwm"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; }; - RGraph2js = derive2 { name="RGraph2js"; version="1.16.0"; sha256="13dypz9a2lz2ikv3zq4j3yik9f4iqqc373vg9ar59araciahh9b0"; depends=[digest graph rjson whisker]; }; - RITAN = derive2 { name="RITAN"; version="1.12.0"; sha256="1jndkr6gkpsf0q13hiyqc2j6nagzjsr9jvlk3i7662yisqavai7y"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png RColorBrewer reshape2 RITANdata sqldf STRINGdb]; }; - RIVER = derive2 { name="RIVER"; version="1.12.0"; sha256="0bqjzb4c249ib018j3apgv1ywlzrh36g4931vjnd7knjyqklxr6x"; depends=[Biobase ggplot2 glmnet pROC]; }; - RImmPort = derive2 { name="RImmPort"; version="1.16.0"; sha256="0zpb8csn0g3mrjhm4vyql5fhy8fxw805rzz6bcdwb0xvbd5a2z7i"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; - RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.12.0"; sha256="18z2bn8l5wp7pxa8pkbgg1g0z81c2yyx9x60djac616vnwqzc4bp"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; - RLMM = derive2 { name="RLMM"; version="1.50.0"; sha256="0xzrj61x4bdh4q4hszg3zbyj8rnndb5i5h841vih58419yp86dbk"; depends=[MASS]; }; - RMassBank = derive2 { name="RMassBank"; version="2.16.0"; sha256="066hvm406r9jy0s5jv8a808k14dchfb3rr23r521mlqcy6f4s8rm"; depends=[Biobase digest enviPat httr MSnbase mzR rcdk Rcpp RCurl rjson S4Vectors XML yaml]; }; - RNAAgeCalc = derive2 { name="RNAAgeCalc"; version="1.0.2"; sha256="06h6gv4zxz9ca8bsaq2vq51mz3mw0r6b2an4sp241b99hwgl2pw4"; depends=[AnnotationDbi ggplot2 impute org_Hs_eg_db recount SummarizedExperiment]; }; - RNASeqPower = derive2 { name="RNASeqPower"; version="1.28.0"; sha256="14ir731p4ccbszkmlyf7ncbz2vm2nzqqgyflrqrdc2ik060gvzcr"; depends=[]; }; - RNASeqR = derive2 { name="RNASeqR"; version="1.6.0"; sha256="1pggfzy2ji0k6wyjm2sacdwk3ndbkjlvksisw02ic7hgim3hc3bw"; depends=[ballgown Biostrings clusterProfiler corrplot DESeq2 DOSE edgeR factoextra FactoMineR ggplot2 gridExtra org_Hs_eg_db org_Sc_sgd_db pathview PerformanceAnalytics pheatmap rafalib reshape2 reticulate Rsamtools stringr systemPipeR systemPipeRdata]; }; - RNAdecay = derive2 { name="RNAdecay"; version="1.8.0"; sha256="06y0slqalgksp3kwmm0rw7mj99jw02w42nqfrwhv401kknxga8hn"; depends=[ggplot2 gplots nloptr scales TMB]; }; - RNAinteract = derive2 { name="RNAinteract"; version="1.36.0"; sha256="0nh9ll8f8wfwhbxyq1lj4y0v854wj55q2zg2bdrzg1bl89dakqa6"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; - RNAither = derive2 { name="RNAither"; version="2.36.0"; sha256="0lf1swy8f990bciss3y95ha22lkigb0gwdk884rsbkn20f6xn6p0"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; }; - RNAmodR = derive2 { name="RNAmodR"; version="1.2.3"; sha256="0lhf84hsw0qnrb2ndj2qkdzgllf6bk56dysvnn0qg0ssglm0gd2i"; depends=[BiocGenerics BiocParallel Biostrings BSgenome colorRamps GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges matrixStats Modstrings RColorBrewer reshape2 ROCR Rsamtools rtracklayer S4Vectors]; }; - RNAmodR_AlkAnilineSeq = derive2 { name="RNAmodR.AlkAnilineSeq"; version="1.2.0"; sha256="16fnsvpfj1cq4sznna09ky8bm8j02sznqvknhq82il1d3b40ysmz"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; }; - RNAmodR_ML = derive2 { name="RNAmodR.ML"; version="1.2.1"; sha256="19q4gh79kxz1hpa477rvishab1sgzp7kgw73ki6cisrz6hsvfjqn"; depends=[BiocGenerics GenomicRanges IRanges ranger RNAmodR S4Vectors]; }; - RNAmodR_RiboMethSeq = derive2 { name="RNAmodR.RiboMethSeq"; version="1.2.0"; sha256="06lzarfip7477r080jc145pvvmrhqc5nh3jb4z8g1b7zf30ca0ir"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; }; - RNAprobR = derive2 { name="RNAprobR"; version="1.20.0"; sha256="03gjii1wijaabr69ph5aiz4dxkagdicd6nl5s54qzimrllymndaa"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr Rsamtools rtracklayer S4Vectors]; }; - RNAsense = derive2 { name="RNAsense"; version="1.2.0"; sha256="1lyv2hjvfjd7xkrjdmvz7qdwg3wrs2rp4w6qw3pabfzvwaycbim7"; depends=[ggplot2 NBPSeq qvalue SummarizedExperiment]; }; - ROC = derive2 { name="ROC"; version="1.64.0"; sha256="0gmx3r77yl5fqrj5j2hamwynbis75qd62q28964kx16z33xfgx89"; depends=[knitr]; }; - ROCpAI = derive2 { name="ROCpAI"; version="1.0.0"; sha256="0wa6lc4xpkvnzq8237452wkp5gd1m3da8jyadshnjs0q6fpvz4c4"; depends=[boot fission knitr SummarizedExperiment]; }; - ROSeq = derive2 { name="ROSeq"; version="1.0.0"; sha256="0yjyyzsk9vsqdc5p1p20rkcsrqwkynh8sxhrf7scjlwqgra989kl"; depends=[edgeR limma pbmcapply]; }; - ROTS = derive2 { name="ROTS"; version="1.16.0"; sha256="1mqhi1rfiw7mhiyify7vm3w17p7sc76wjda3ak6690hrc3gsm3cm"; depends=[Biobase Rcpp]; }; - ROntoTools = derive2 { name="ROntoTools"; version="2.16.0"; sha256="13pn4hkgzyfvyv5xf2s5am76bds2xrq23hab0v9k5hnr13q6wx1c"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; - RPA = derive2 { name="RPA"; version="1.44.0"; sha256="1gl7b1zxgab9q4afhpaqd78xjza5d4jr9n1h8ykshz9ipy3yvq60"; depends=[affy BiocGenerics phyloseq]; }; - RProtoBufLib = derive2 { name="RProtoBufLib"; version="2.0.0"; sha256="0kfinf9vzc1i5qxmaw832id557gr1vqdi1m8yiaxz83g37wh8vps"; depends=[]; }; - RRHO = derive2 { name="RRHO"; version="1.28.0"; sha256="0bj3i6mpnj5zjm786pqy0aa57pq9n3bbzb88l1lcid9g71amyf8q"; depends=[VennDiagram]; }; - RSVSim = derive2 { name="RSVSim"; version="1.28.0"; sha256="1bi994994v0wfz3sx2l9x92b9p05djwpsyw6a5ppqw1yhgxhzf0i"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; - RSeqAn = derive2 { name="RSeqAn"; version="1.8.0"; sha256="0ay2lx892yrpv2cvvi68gk026pzjj516jk0j9g3iwd4ywa7ir5r9"; depends=[Rcpp]; }; - RTCA = derive2 { name="RTCA"; version="1.40.0"; sha256="18vsr0js4g4szfa05sk2b72zim8psyhk1h6nvcxzkdgzhzm3fyh9"; depends=[Biobase gtools RColorBrewer]; }; - RTCGA = derive2 { name="RTCGA"; version="1.18.0"; sha256="1jlmwb7b3gapx47kc0rgq11vzhm3g554pwv8mg6jfxcl1ypw9v57"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; - RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.18.0"; sha256="0idn65dbm12p1gnbgqfs0fk3q95y3171mmzfwwpxpdrkm4hywbqk"; depends=[BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges httr limma RaggedExperiment RCircos RCurl RJSONIO S4Vectors stringr SummarizedExperiment survival TCGAutils XML]; }; - RTN = derive2 { name="RTN"; version="2.12.1"; sha256="139v6hyssdhkr5gmrlir41gwmy6da1wpi7csjvmv98qxg09h84zp"; depends=[car data_table igraph IRanges limma minet mixtools pheatmap pwr RedeR S4Vectors snow SummarizedExperiment viper]; }; - RTNduals = derive2 { name="RTNduals"; version="1.12.2"; sha256="0150avr4aba7gpfxq7bv287shqhpwiwkwrlsk4c7ip16656jc59r"; depends=[RTN]; }; - RTNsurvival = derive2 { name="RTNsurvival"; version="1.12.2"; sha256="1rnjj373y98ywcwdbxzzmk01cp4gwr1ni07yc3g7fiscmrlcsgck"; depends=[data_table dunn_test egg ggplot2 pheatmap RColorBrewer RTN RTNduals scales survival]; }; - RTopper = derive2 { name="RTopper"; version="1.34.0"; sha256="0ia8h1xmz6flv0bvrzrskwzi7acx96mv95hxfyklpivndhfd7bkg"; depends=[Biobase limma multtest]; }; - RUVSeq = derive2 { name="RUVSeq"; version="1.22.0"; sha256="0yqs9xgyzw3cwb4l7zjl1cjgbsjp05qrqnwyvh7q81wdp7x5p55x"; depends=[Biobase EDASeq edgeR MASS]; }; - RUVcorr = derive2 { name="RUVcorr"; version="1.20.0"; sha256="01kdmvbvl8aip8xb4ld2jdv3139cfsa71a2s0p15rf87ipjj9hwl"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; - RUVnormalize = derive2 { name="RUVnormalize"; version="1.22.0"; sha256="0y28mmikqmz9fk1v7sb4fhkda20900cri60065ckz9jvnqzwjsam"; depends=[Biobase RUVnormalizeData]; }; - RVS = derive2 { name="RVS"; version="1.10.0"; sha256="00pynp8jrnzlq6c745ci84faab7cl7h8f6wx44x7v2hpfzqc9xzh"; depends=[GENLIB gRain kinship2 snpStats]; }; - RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.12.0"; sha256="0k8n73r8z3jrz5sskmiir7ijl3ya4radzny3z5amwqqlfc0k5995"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - RandomWalkRestartMH = derive2 { name="RandomWalkRestartMH"; version="1.8.0"; sha256="0m0whfpyml2i3p5pxsirvkr978jzmrw3wpg9w1r4fwybyrc2qpvf"; depends=[dnet igraph Matrix]; }; - RankProd = derive2 { name="RankProd"; version="3.14.0"; sha256="0yk6ysgkwxg5jlrbk99iandn4nwblbb34jjmb2nk1dkpvgkcg22f"; depends=[gmp Rmpfr]; }; - RareVariantVis = derive2 { name="RareVariantVis"; version="2.16.0"; sha256="036gk75whf60jz19vsppx045yz9w4mxd3y4b5a9zp8ylrd9z9if3"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; - Rariant = derive2 { name="Rariant"; version="1.24.0"; sha256="16ddyq78idrfxkiy4wsgv76hlp6skfvm3vssj0p0il6sil48yqff"; depends=[BiocGenerics dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; }; - RbcBook1 = derive2 { name="RbcBook1"; version="1.56.0"; sha256="0safnjrwf130hx4n8ak6c4ynqvgjdn1a5s6nbl130d78nramvwyn"; depends=[Biobase graph rpart]; }; - Rbowtie = derive2 { name="Rbowtie"; version="1.28.1"; sha256="0589ggbfx6di42wvqyhnzgrhmb52swr3r5z22w6b8x0z2y7hl8b3"; depends=[]; }; - Rbowtie2 = derive2 { name="Rbowtie2"; version="1.10.1"; sha256="19v7wfvrd53j618c1xbiqnlsf2kxw697myryx0vb9s2aspknyzz7"; depends=[]; }; - Rcade = derive2 { name="Rcade"; version="1.30.0"; sha256="1a6cp1cglm52nmyv3bzcx6bsh3sbzy2v7zmrx7p8hkpkzlkdj4i4"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; }; - RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.28.0"; sha256="0bfy5l146whsafdp58gwgqs0pkmlnfqnlr60rr6a05swh32v0zk5"; depends=[flowType graph Rgraphviz sfsmisc]; }; - RcisTarget = derive2 { name="RcisTarget"; version="1.8.0"; sha256="1lvi873dv0vhw53s1pmcilw8qwlywm9p2ybphcl168nzh6w31r4i"; depends=[AUCell BiocGenerics data_table feather GSEABase R_utils SummarizedExperiment]; }; - Rcpi = derive2 { name="Rcpi"; version="1.24.0"; sha256="02677hw1a3f9iyaq23q5abh5vvd981ppk5wp3x2dqh700808hw0h"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; - Rcwl = derive2 { name="Rcwl"; version="1.4.8"; sha256="0lkcs95x3mrh5snzdlqbbkf96d96h270w39nzh8vn8m3ca4pj4pi"; depends=[batchtools BiocParallel codetools DiagrammeR R_utils S4Vectors shiny yaml]; }; - RcwlPipelines = derive2 { name="RcwlPipelines"; version="1.4.5"; sha256="0pqa462iaiih2zxxfa51fm320yjjyj89d0h6xsihbxrwrsicwrcm"; depends=[BiocFileCache rappdirs Rcwl]; }; - Rdisop = derive2 { name="Rdisop"; version="1.48.0"; sha256="1danfv8v16mn1phha8wb5ip7gdv7mxyvzkbaylx5xj9qhdzm9rnj"; depends=[Rcpp]; }; - ReQON = derive2 { name="ReQON"; version="1.34.0"; sha256="06m0hd4aqsxjyzhs8b1zys7lz8289qgwn7jp2dpln1j7cf02q4bz"; depends=[rJava Rsamtools seqbias]; }; - ReactomeGSA = derive2 { name="ReactomeGSA"; version="1.2.4"; sha256="04f2w24ia2w84ws1ray8nmiankqpy4sbsn5pda9k90avxcsqbrpd"; depends=[ggplot2 gplots httr jsonlite progress RColorBrewer]; }; - ReactomePA = derive2 { name="ReactomePA"; version="1.32.0"; sha256="1ngilyn1mihwxs4sh5gk9y829xghdmh277cfw3vfgflz9sgwy21x"; depends=[AnnotationDbi DOSE enrichplot ggplot2 ggraph graphite igraph reactome_db]; }; - ReadqPCR = derive2 { name="ReadqPCR"; version="1.34.0"; sha256="1z97qb1vlwddbzpq4g9n986g46qk39mk69hhxwfqw3xdgnqqbj92"; depends=[Biobase]; }; - RedeR = derive2 { name="RedeR"; version="1.36.0"; sha256="15f1qb5k9x7agjjjrinc4i237ag4vjv1875a1kqakwlg1jvw5izg"; depends=[igraph]; }; - RefNet = derive2 { name="RefNet"; version="1.24.0"; sha256="0hqz0fpbcikf65jb5vzcf74mg8ifsmvb48irmcqci48hlphmppcl"; depends=[AnnotationHub BiocGenerics IRanges PSICQUIC RCurl shiny]; }; - RefPlus = derive2 { name="RefPlus"; version="1.58.0"; sha256="1gqcc2kzwj6kq7s0jggncic2a7q9gbzpayv569sqrdm6gv5qml8n"; depends=[affy affyPLM Biobase preprocessCore]; }; - RepViz = derive2 { name="RepViz"; version="1.4.0"; sha256="1aj58cbbidp4bzh41sg0g2kdnfszzj67x1z14i5ckmp5f27l8mdc"; depends=[biomaRt GenomicRanges IRanges Rsamtools S4Vectors]; }; - Repitools = derive2 { name="Repitools"; version="1.34.0"; sha256="11nmcm26nfvl2hfh1ly6mzzqrvhkwsnfnkd0c1nf3wxyapvsp025"; depends=[BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; - ReportingTools = derive2 { name="ReportingTools"; version="2.28.0"; sha256="1ig1h224silbdbdr0j9j9sysp9l9dzpcsjzn8jp57h3gh4pdqbfx"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; - Rgin = derive2 { name="Rgin"; version="1.8.0"; sha256="179w3bk8jhr8ykv1hmkipwivv56ahb0m9f6vdvvqqjfi766mc3hl"; depends=[RcppEigen]; }; - Rgraphviz = derive2 { name="Rgraphviz"; version="2.32.0"; sha256="1calpvzgcz6v7s4x6bf35kj83sga95zjp7x87p5d3qnbv7q2wz5y"; depends=[graph]; }; - Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.10.1"; sha256="0f45sqrvzj6x4mckalyp8366hm8v0rrmzklx3xd4gs6l2wallcn9"; depends=[]; }; - Rhisat2 = derive2 { name="Rhisat2"; version="1.4.0"; sha256="0hhmcdnixkaqx9x9cl2vjaba3ri8m6wkbnbhxjmy51jwqzy2223a"; depends=[GenomicFeatures GenomicRanges SGSeq]; }; - Rhtslib = derive2 { name="Rhtslib"; version="1.20.0"; sha256="186r7icrkzrni1c4n33ip7dlsfgys7hnqf0simvxrpl3yhh3ygdi"; depends=[zlibbioc]; }; - RiboProfiling = derive2 { name="RiboProfiling"; version="1.18.0"; sha256="0s30m96dbbrzbywz3wai5ar0nsshb16lq101nyl20w1bk7sk2bha"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; - Ringo = derive2 { name="Ringo"; version="1.52.0"; sha256="10zd73vfahcvpxizks7n118wli68bclcls5r926y28qcgbv41gy9"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; - Risa = derive2 { name="Risa"; version="1.30.0"; sha256="156gcxcc09iny0nfa73c5j05fhay4dmjw10hk7nnywigckc05zgx"; depends=[affy Biobase biocViews Rcpp xcms]; }; - Rmagpie = derive2 { name="Rmagpie"; version="1.44.0"; sha256="1j6qbk9hgg2pp3f11mwzvrymljrn2bx2cwh74z6cq6yyavwb7ywq"; depends=[Biobase e1071 kernlab pamr]; }; - RmiR = derive2 { name="RmiR"; version="1.44.0"; sha256="115qfmab0czrq65zaa0y0wqf1sxvsdsx8p9k8nkmvbzcg96dy56k"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; - Rmmquant = derive2 { name="Rmmquant"; version="1.6.0"; sha256="11k2k6l42xybj5svrisv3kjasp5f6z6qjkg5lpg2irm2ikxw6sv2"; depends=[BiocStyle DESeq2 devtools GenomicRanges org_Mm_eg_db Rcpp S4Vectors SummarizedExperiment TBX20BamSubset TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - RnBeads = derive2 { name="RnBeads"; version="2.6.0"; sha256="11li6qdxnnvc4rjfkhrb1r3bizyn087ra8wp37y3xkvf78ziyzsw"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; }; - Rnits = derive2 { name="Rnits"; version="1.22.0"; sha256="01g6z0v8iqzi12xgqmnr0hkb8q6bwf8kwrv8yv9nj7964hlvvgdl"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; - Roleswitch = derive2 { name="Roleswitch"; version="1.25.0"; sha256="1ni9av19xrf1qhrzqnx55ayy26g062y9ipjxgb9k3gc9dbgja0sj"; depends=[Biobase biomaRt Biostrings DBI microRNA plotrix pracma reshape]; }; - RpsiXML = derive2 { name="RpsiXML"; version="2.30.0"; sha256="15i7s6vdx2c9q9p9dv9mbyp238v4j7lh138v7n0pnmk20d9m0cl3"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; - Rqc = derive2 { name="Rqc"; version="1.22.0"; sha256="1qsm9r6xfsplk8zpf7p0k7fi86l8a74nx963sna8gzig5qgrvnm3"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; - Rsamtools = derive2 { name="Rsamtools"; version="2.4.0"; sha256="0z01z0s71f941k7sns46nyabps28c69d6jxx6sppjpc6h4vrw0vq"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges Rhtslib S4Vectors XVector zlibbioc]; }; - Rsubread = derive2 { name="Rsubread"; version="2.2.6"; sha256="04h79qhq93d8id0rr5xnj9vf82ygwxzdlnck78yv738xd0jjvnpm"; depends=[Matrix]; }; - Rtreemix = derive2 { name="Rtreemix"; version="1.50.0"; sha256="11vxwsx9nv8hkj747yk27ln6a06idf1x78dzfijyqs85gcvdsjaw"; depends=[Biobase graph Hmisc]; }; - S4Vectors = derive2 { name="S4Vectors"; version="0.26.1"; sha256="1ddr3ngyczx332zw9ai1a6h7442lgrbfcj8vrhvbkdkzqwj14xmb"; depends=[BiocGenerics]; }; - SAGx = derive2 { name="SAGx"; version="1.62.0"; sha256="0ar2chczdzzadib0mz3fyk8g2anqsi6jsxh61r2x74r8gwy0w6q0"; depends=[Biobase multtest]; }; - SAIGEgds = derive2 { name="SAIGEgds"; version="1.2.3"; sha256="04mgsakqjd0zr6bjj1sm8zsp0jrg32qyqqmdf77k9dd6w2f847rx"; depends=[gdsfmt Rcpp RcppArmadillo RcppParallel SeqArray SPAtest]; }; - SBGNview = derive2 { name="SBGNview"; version="1.2.0"; sha256="05391s9alhxdjx4zdqsx03jnsm0agnm1cky18mwlmbrv0i0bm0js"; depends=[AnnotationDbi igraph knitr pathview Rdpack rmarkdown rsvg SBGNview_data SummarizedExperiment xml2]; }; - SBMLR = derive2 { name="SBMLR"; version="1.84.0"; sha256="07k2a259pdynh0lchzcmdkj85f0054h6ad7h5rnxjv21fqscqfqj"; depends=[deSolve XML]; }; - SC3 = derive2 { name="SC3"; version="1.16.0"; sha256="15x7q8c13r4b6shrn0j88hw5vbrj7vrinihg5ihgd3l5g1x8x499"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; }; - SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.30.0"; sha256="1kdy0g71wrl05fgb2s1l1xnl8wfsavrjzqn9bdxxm64axbzhzl8p"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; - SCANVIS = derive2 { name="SCANVIS"; version="1.2.0"; sha256="1qqac770x0csiv5vl61rrcdnqa8xrzqzy04yafnygk1c73aa7and"; depends=[IRanges plotrix RCurl rtracklayer]; }; - SCBN = derive2 { name="SCBN"; version="1.6.0"; sha256="0k4bxlfv2adj0mrhrfgjpdg3zswxq646298wm04d4lm6w2fwfypj"; depends=[]; }; - SCOPE = derive2 { name="SCOPE"; version="1.0.0"; sha256="0ha8ghx0fkj9c01n95fm2s6df5yisxdi6bf40l53cl8ai0aiv140"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DescTools DNAcopy doParallel foreach GenomeInfoDb GenomicRanges gplots IRanges RColorBrewer Rsamtools S4Vectors]; }; - SCnorm = derive2 { name="SCnorm"; version="1.10.0"; sha256="1hc503wimicp64r8c833sk49bhmxarbwng6rkcvmhj97hssf7v66"; depends=[BiocGenerics BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SingleCellExperiment SummarizedExperiment]; }; - SDAMS = derive2 { name="SDAMS"; version="1.8.0"; sha256="0xmfk8xm2xsgkk732dq4mpysjsxkm2m533g1kp25jkpvlx41rs92"; depends=[qvalue SummarizedExperiment trust]; }; - SELEX = derive2 { name="SELEX"; version="1.20.0"; sha256="0jzxmj2y653igfksxvrr2z22amlddqw3wimfgq86ydfpjzj1g0n4"; depends=[Biostrings rJava]; }; - SEPIRA = derive2 { name="SEPIRA"; version="1.8.0"; sha256="0zvhw3w04xm523ancvv3rsh2ijnjkkxw632619yab8lsvff0lf6b"; depends=[corpcor limma]; }; - SEtools = derive2 { name="SEtools"; version="1.2.0"; sha256="1l0qz4a09vz247di8p2wjf4l2vd0f0aq8prp03m6lgawbpcy3qzm"; depends=[BiocParallel circlize ComplexHeatmap data_table edgeR openxlsx pheatmap randomcoloR S4Vectors seriation SummarizedExperiment]; }; - SGSeq = derive2 { name="SGSeq"; version="1.22.0"; sha256="11rxx7abjyga2sdcp4x4z3n8xjx6973sckyzmh9ax6r46kwhxq8c"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; - SIAMCAT = derive2 { name="SIAMCAT"; version="1.8.1"; sha256="106kaszn9svbzwwly5z7af8cmvhmwq1jw2w0vzdassmjpx06s2h9"; depends=[beanplot corrplot glmnet gridBase gridExtra infotheo LiblineaR matrixStats mlr ParamHelpers phyloseq pROC progress PRROC RColorBrewer scales stringr]; }; - SICtools = derive2 { name="SICtools"; version="1.18.0"; sha256="1ykgx9f274jryvpy4jf9v6q1zn5amzh7rx6rpkiswnhvapryanpr"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; - SIM = derive2 { name="SIM"; version="1.58.0"; sha256="018f748a99s9arqp6zgqhqm2k1p1yz8nvqjp9m037vhcc7056sas"; depends=[globaltest quantreg quantsmooth]; }; - SIMAT = derive2 { name="SIMAT"; version="1.20.0"; sha256="1xgi7923yd11hjbv73vwixzbqq8206i79jkpxza0dl8wdm5v1ncy"; depends=[ggplot2 mzR Rcpp reshape2]; }; - SIMD = derive2 { name="SIMD"; version="1.6.0"; sha256="1jg215bd0j4z0npq5yj52pmblbr8iwa3lwp6h2rs9jjaapc0a7nc"; depends=[edgeR methylMnM statmod]; }; - SIMLR = derive2 { name="SIMLR"; version="1.14.0"; sha256="0kwvbs45qhx4mkrshxjgqms0g3qz08zrv9mlhwcmqxrzhh79b9gr"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; - SISPA = derive2 { name="SISPA"; version="1.18.0"; sha256="0c51c2vc6imcbszg37yjl4imvmn4sdy2wg6lvf143sqmsfk0mr2q"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; }; - SLGI = derive2 { name="SLGI"; version="1.48.0"; sha256="0imji4jhhhkx83s29cbmp2gdn5223236h2z6ji23v6f79h3iklww"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; - SLqPCR = derive2 { name="SLqPCR"; version="1.54.0"; sha256="0g1fjjilz3zfwaglq2mx7xgn0lznmd6kx6f2clwnyy08qs00k68j"; depends=[]; }; - SMAD = derive2 { name="SMAD"; version="1.4.0"; sha256="1j4gxkjhd0prs1wskq6npf0zk3i03l45zfaxdmzah0wqkzkw5pxk"; depends=[dplyr magrittr Rcpp RcppAlgos tidyr]; }; - SMAP = derive2 { name="SMAP"; version="1.52.0"; sha256="1yhywmf6jlknpfzbwr6yv6lwbrq5j8q4pa2jbyfzlx1pv2a98y2q"; depends=[]; }; - SMITE = derive2 { name="SMITE"; version="1.16.0"; sha256="1k6qp7p83i4ibap0dv1vm0xwg2q89j22jp5av2k4az0nril00149"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGGREST org_Hs_eg_db plyr reactome_db S4Vectors scales]; }; - SNAGEE = derive2 { name="SNAGEE"; version="1.28.0"; sha256="15a41lz8gvwx8dz44g833a2b15n5q20klnp2lq55avrkrd8kpl8g"; depends=[SNAGEEdata]; }; - SNPRelate = derive2 { name="SNPRelate"; version="1.22.0"; sha256="14hy5z76xzpddi24vxbqi52522w1jbailm2arsshzwj2fwxmwnr3"; depends=[gdsfmt]; }; - SNPediaR = derive2 { name="SNPediaR"; version="1.14.0"; sha256="0qx0fjxdyvrq8gkljmrpja53gsnhqj613v0sdnqdv1zmd7nxff8d"; depends=[jsonlite RCurl]; }; - SNPhood = derive2 { name="SNPhood"; version="1.18.0"; sha256="17zwvs60r21zra93cc68g9fx483k15iyzhhczga0srp5yw3qs54k"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - SPEM = derive2 { name="SPEM"; version="1.28.0"; sha256="0mq7askcm5902p22r8qbppmb8nmhhr36va24bhkdp4dbxfw6y5mb"; depends=[Biobase Rsolnp]; }; - SPIA = derive2 { name="SPIA"; version="2.40.0"; sha256="0k5k3c5g6g43xy9q8h3fbv7xkvjx15pabps49acqjz0jcak5xpsm"; depends=[KEGGgraph]; }; - SPLINTER = derive2 { name="SPLINTER"; version="1.14.0"; sha256="04qr648rg0qs7y60qvaia8ca28clmhx0w39mgyxvyyxs0f9nqyfn"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 googleVis Gviz IRanges plyr S4Vectors seqLogo stringr]; }; - SPONGE = derive2 { name="SPONGE"; version="1.10.0"; sha256="1cvr8ci1if2f0w72yhdn76nshbv85x9wd3dm5cq2vy2p7x27xlib"; depends=[Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; }; - SQLDataFrame = derive2 { name="SQLDataFrame"; version="1.2.0"; sha256="1nn4dx0957dmng5wcx2wqzzrfwp3vk3q9iz8pr4ad495mc876b4f"; depends=[BiocGenerics DBI dbplyr dplyr lazyeval RSQLite S4Vectors tibble]; }; - SQUADD = derive2 { name="SQUADD"; version="1.38.0"; sha256="1ki5grqn0f9krcm0wnwpfywca23c4ib1bh08mvp5ax3rg18rd0gl"; depends=[RColorBrewer]; }; - SRAdb = derive2 { name="SRAdb"; version="1.50.0"; sha256="03bhfxhw4rk4fl4i06wqv5s5s2iarm80mypjzi51blhqz1d1i414"; depends=[GEOquery graph RCurl RSQLite]; }; - SRGnet = derive2 { name="SRGnet"; version="1.14.0"; sha256="1z0f9dvlagi795rf4s25siqwldiqkxsrmks5006i4fz0xlgxlbm0"; depends=[DMwR EBcoexpress gbm Hmisc igraph limma MASS matrixStats pvclust]; }; - SSPA = derive2 { name="SSPA"; version="2.28.0"; sha256="1md98lz3aaigf56sa8sc958kh60v9j0byj4vsqmlcxghs9wgj2bs"; depends=[lattice limma qvalue]; }; - STAN = derive2 { name="STAN"; version="2.16.0"; sha256="1qhdysp56rx285ydzrl8z5a6nw632w0nzj01x62pjzij1a4p8jh0"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; }; - STATegRa = derive2 { name="STATegRa"; version="1.24.0"; sha256="1yvnmd3gc76nc03mfnzkqsvy2i6yh3cg966ffz3mdjpaf6442122"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; - STRINGdb = derive2 { name="STRINGdb"; version="2.0.2"; sha256="0mzhhskb51dli7lk9v8s9isqdrv5f7g8pbyrk7mi1lsdymfya8v5"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; - STROMA4 = derive2 { name="STROMA4"; version="1.12.0"; sha256="1prsly8i5hjcp8i1xd6nnk8ia6l88bchwqhg9bxma281zn8d94af"; depends=[Biobase BiocParallel cluster matrixStats]; }; - SVAPLSseq = derive2 { name="SVAPLSseq"; version="1.13.0"; sha256="07nx309h9ikw78kyhiwh44mdkdch8irr29mwpyksswl69bn8hwx1"; depends=[edgeR ggplot2 limma lmtest pls SummarizedExperiment]; }; - SWATH2stats = derive2 { name="SWATH2stats"; version="1.18.0"; sha256="0ls15k3rki3al200ksxn646vxfcxxy26pdararw142pwwgizd6qy"; depends=[biomaRt data_table ggplot2 reshape2]; }; - SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.42.0"; sha256="07g7k0ji0n3sshnl9ff8619h91mbf0qbq2ld003ywkj98ws8l0va"; depends=[]; }; - ScISI = derive2 { name="ScISI"; version="1.60.0"; sha256="03klrnw1czpijql4ia3zi6l5286r6cl3kywk5rbr8x7dakvra1j0"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; - Scale4C = derive2 { name="Scale4C"; version="1.10.0"; sha256="0xhr44wbmhwvczjplby2848vk39k2a9g289kkxj6nrz46z8114fv"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; }; - Sconify = derive2 { name="Sconify"; version="1.8.0"; sha256="0p9qjhxqkq2p96jbrj9szm46srnj6qgzhlpmyb3a9vz99bvh55yv"; depends=[dplyr flowCore FNN ggplot2 magrittr readr Rtsne tibble]; }; - SemDist = derive2 { name="SemDist"; version="1.22.0"; sha256="0rqigj4q86zi0qw1296vs5l8m706iik1898ynsfxi61kmb0s9kyp"; depends=[annotate AnnotationDbi GO_db]; }; - SeqArray = derive2 { name="SeqArray"; version="1.28.1"; sha256="006kvqpas7shpp4bal3wgkrb4vif7mc4hkdyhslykjmw57pq903f"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - SeqGSEA = derive2 { name="SeqGSEA"; version="1.28.0"; sha256="1i7bsyaqppfgzvz0iwknmxxwhrlzx3z55rhmrvg4h9lfclxq6fwd"; depends=[Biobase biomaRt DESeq doParallel]; }; - SeqSQC = derive2 { name="SeqSQC"; version="1.10.0"; sha256="19ika6hgz2lj322kxyn96k9ldaw912gz07p900bj7h1imqj2737f"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; }; - SeqVarTools = derive2 { name="SeqVarTools"; version="1.26.0"; sha256="1i8awd1lav7hxzwim2c783br36d5rl5ib7y1j7rrb5lbr811azmz"; depends=[Biobase dplyr gdsfmt GenomicRanges GWASExactHW IRanges logistf Matrix rlang S4Vectors SeqArray tidyr]; }; - SharedObject = derive2 { name="SharedObject"; version="1.2.2"; sha256="1wlxj8a10q6ldaigzvsch30k96zlyip06f8dq92wi1g75pw3b0yg"; depends=[BH BiocGenerics Rcpp]; }; - ShortRead = derive2 { name="ShortRead"; version="1.46.0"; sha256="0l4kdln69y6yhln0xiv2jmpxg05fjcglln406p43a2bqvk2lr03d"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; }; - SigCheck = derive2 { name="SigCheck"; version="2.20.0"; sha256="1x4waf5h0ya279xrb6zbwaln9rdqr344zg6lgy0rkm99ily54pij"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; - SigFuge = derive2 { name="SigFuge"; version="1.26.0"; sha256="0y3392vyavx3hpzdg3i3qp1hrnkn1yklzff491swwlfgqjdd67q0"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; - SigsPack = derive2 { name="SigsPack"; version="1.2.0"; sha256="1asng4bnjc2nhd1wyq8r6kq1h1g5s312n0xpgymn2gj6h2iipaz3"; depends=[Biobase Biostrings BSgenome GenomeInfoDb GenomicRanges quadprog rtracklayer SummarizedExperiment VariantAnnotation]; }; - SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.26.0"; sha256="04ab0vnk2xri9f1ih21cdbnwmhldwv9pix70876s3cy3sc95y97r"; depends=[Biobase limma mclust Ringo]; }; - SimFFPE = derive2 { name="SimFFPE"; version="1.0.0"; sha256="1g9705g3iv451r7j071n7k49cm4dz2dr9073nl90qz7v4vrcld24"; depends=[Biostrings doParallel dplyr foreach GenomicRanges IRanges Rsamtools truncnorm]; }; - SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.10.1"; sha256="092wvk11n7pa234vlwhxm3gdi4k3sbnz1splhxalbdhz3jf02zfp"; depends=[BiocGenerics S4Vectors SummarizedExperiment]; }; - SingleCellSignalR = derive2 { name="SingleCellSignalR"; version="1.0.0"; sha256="1xir7a9y93yx73ckw0y0x2qiq02pkm3w058c1fl0lnv9azx8sab7"; depends=[BiocManager circlize data_table edgeR foreach gplots igraph limma multtest pheatmap Rtsne scran SIMLR stringr]; }; - SingleR = derive2 { name="SingleR"; version="1.2.4"; sha256="1al2b8i6f56248n0vdd4xzwqimqha8fhcrrj6pknp3dbs0gd27rp"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats ExperimentHub Matrix Rcpp S4Vectors SummarizedExperiment]; }; - SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.24.0"; sha256="0d34mss73w1jdnmilk060a1fywlfmqbnlir089q9m3q1p3x0j4c1"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; - SpacePAC = derive2 { name="SpacePAC"; version="1.26.0"; sha256="1wryq99kmjig90zjlj5ys87rbwqclsvzk2rz4rwb07qil6hbkvsk"; depends=[iPAC]; }; - Spaniel = derive2 { name="Spaniel"; version="1.2.0"; sha256="0gwp5ilsyzpn8sms0zajplab3bsj429r0dhdmi1bd8rfrlbs2005"; depends=[dplyr ggplot2 jpeg magrittr S4Vectors scater Seurat shiny SingleCellExperiment SummarizedExperiment]; }; - SparseSignatures = derive2 { name="SparseSignatures"; version="1.8.0"; sha256="0nls5vwww7wkg555xfzp9srmj8fic7fk46zk5w166519xjx92yvj"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_1000genomes_hs37d5 data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF nnlasso nnls]; }; - SpatialCPie = derive2 { name="SpatialCPie"; version="1.4.0"; sha256="1sdnc8f7x6n5k5i7qgfv7gh0y5s27gy3zh94ffwwic947xzw1b7k"; depends=[colorspace data_table digest dplyr ggforce ggiraph ggplot2 ggrepel igraph lpSolve purrr readr rlang shiny shinycssloaders shinyjs shinyWidgets SummarizedExperiment tibble tidyr tidyselect zeallot]; }; - SpeCond = derive2 { name="SpeCond"; version="1.42.0"; sha256="0vr4assa8i8dnsfsvwqi0dg57qxi1yg3sjiqxs109ybcfg3y5rlj"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; - SpectralTAD = derive2 { name="SpectralTAD"; version="1.4.0"; sha256="0ncqmfzip0bggxsrsbgfkh39d59d9pv031rg11r2spknd9hyn3mn"; depends=[BiocParallel cluster dplyr GenomicRanges HiCcompare magrittr Matrix PRIMME]; }; - SpidermiR = derive2 { name="SpidermiR"; version="1.18.2"; sha256="166wjg5xk2vyqr9lzpabapaydi92n5bd58if3mb9apxwfsdskszy"; depends=[AnnotationDbi gdata ggplot2 gplots gridExtra httr igraph lattice latticeExtra MAGeCKFlute miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; - SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.28.0"; sha256="1a19dr126cs3lr0bjnwnnz2qjxyl0dmw1xm15p14w4lgvmndg5az"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; - StarBioTrek = derive2 { name="StarBioTrek"; version="1.14.0"; sha256="010a9fmlwknrig642g12lk3r583rynsq2kwpj7an2ax1ndc8my87"; depends=[AnnotationDbi e1071 ggplot2 graphite igraph MLmetrics reshape2 ROCR SpidermiR]; }; - Starr = derive2 { name="Starr"; version="1.43.0"; sha256="1cbbgdz92ja25fvn3v0cq83lb9h2dgpw7c03galjxprnkkgngmb5"; depends=[affxparser affy MASS pspline Ringo zlibbioc]; }; - Streamer = derive2 { name="Streamer"; version="1.34.0"; sha256="10z61k9v3l5zwb1nkxwr7920ykpmimrvzkykfqpyk2hzapd9dxn5"; depends=[BiocGenerics graph RBGL]; }; - Structstrings = derive2 { name="Structstrings"; version="1.4.1"; sha256="0q90qvwg6wsmzz2n9wfqixmh6r24vyxbnkfpb98ghrgfhib9rq57"; depends=[BiocGenerics Biostrings crayon IRanges S4Vectors stringi stringr XVector]; }; - StructuralVariantAnnotation = derive2 { name="StructuralVariantAnnotation"; version="1.4.0"; sha256="1qkr6mxqyknf0sgn7k7laqmwgf27g81d80k7qikxiln8fimwj8xa"; depends=[assertthat BiocGenerics Biostrings dplyr GenomicRanges rlang rtracklayer stringr VariantAnnotation]; }; - SubCellBarCode = derive2 { name="SubCellBarCode"; version="1.4.0"; sha256="1x370a1n5gzlz2cwf4f8ghzcpa4nc17h79vp04s8c96gwxqcjpzn"; depends=[AnnotationDbi caret e1071 ggplot2 ggrepel gridExtra networkD3 org_Hs_eg_db Rtsne scatterplot3d]; }; - SummarizedBenchmark = derive2 { name="SummarizedBenchmark"; version="2.6.0"; sha256="11lbqmqx0bdw0lskh49nqaxgvzlaj0gs972ym1ahmnylqg1jxn0s"; depends=[BiocGenerics BiocParallel crayon digest dplyr ggplot2 mclust rlang S4Vectors sessioninfo stringr SummarizedExperiment tibble tidyr UpSetR]; }; - SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.18.2"; sha256="1raw5ycigr6gjgzn3kx3jls5hzww10fhnwd8c17c20hmhirf13rw"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors]; }; - Sushi = derive2 { name="Sushi"; version="1.26.0"; sha256="17j3d5qjq5nbv99by5mq8rwr0jgh2jyyfn2nwxmwgzlmk3lgi1rb"; depends=[biomaRt zoo]; }; - SwathXtend = derive2 { name="SwathXtend"; version="2.10.0"; sha256="1jmcf50gplw3wzvkl5kvvfrl5m753cxkxpg72bri4i6p6myqm83i"; depends=[e1071 lattice openxlsx VennDiagram]; }; - SwimR = derive2 { name="SwimR"; version="1.26.0"; sha256="0q9i886yy5q7gxq382j9gykj5c5kpkck1lz54la6py6qyb800p4a"; depends=[gplots heatmap_plus R2HTML signal]; }; - SynExtend = derive2 { name="SynExtend"; version="1.0.0"; sha256="0ypca32z57flwmmxghmyy1pg1y5x24kkbg9ka82fdmgv943llrd4"; depends=[Biostrings DECIPHER igraph IRanges S4Vectors]; }; - SynMut = derive2 { name="SynMut"; version="1.4.0"; sha256="1pldzvzlxm77c7zdzfvvi6zdy24j4qzf0c22l136yarmd369zl4k"; depends=[BiocGenerics Biostrings seqinr stringr]; }; - TAPseq = derive2 { name="TAPseq"; version="1.0.0"; sha256="1az32hk1l9n6j1ak70npfji8xkwjyggca8najq6hm9z22n1mj90n"; depends=[BiocGenerics BiocParallel Biostrings BSgenome dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges S4Vectors tidyr]; }; - TBSignatureProfiler = derive2 { name="TBSignatureProfiler"; version="1.0.0"; sha256="1gcn1876qm9fzra1hiqg47vxlpqqh79mg6n61f5f3ik3qsarxyy5"; depends=[ASSIGN BiocParallel bioDist boot caret circlize ComplexHeatmap DESeq2 DT e1071 edgeR gdata ggfortify ggplot2 glmnet GSVA RColorBrewer readr reshape2 ROCit S4Vectors shiny singscore SummarizedExperiment]; }; - TCC = derive2 { name="TCC"; version="1.28.0"; sha256="0ah46f6h4y9l737a4jgd3y6af1nz693fl9pm3nxkgdakf0v46bly"; depends=[baySeq DESeq DESeq2 edgeR ROC]; }; - TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.16.4"; sha256="0v360yaics0p3xlnvb2acgfmfapafmxpj6dvmk6cldgksnazv0sx"; depends=[biomaRt data_table downloader dplyr GenomicRanges ggplot2 httr IRanges jsonlite knitr plyr purrr R_utils readr rvest S4Vectors stringr SummarizedExperiment tibble tidyr XML xml2]; }; - TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.14.0"; sha256="1jjq7jcf0978mik9k25y4rqyljwlcy2wypmz607vkyxl58q6kql1"; depends=[caret clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr sesame shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks TCGAbiolinksGUI_data]; }; - TCGAutils = derive2 { name="TCGAutils"; version="1.8.1"; sha256="1ikkjz73q7qw86jzrmbddqr9sd40g7xaznpyf4zz9aj0dzjvdj5z"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicDataCommons GenomicFeatures GenomicRanges IRanges MultiAssayExperiment RaggedExperiment rvest S4Vectors stringr SummarizedExperiment xml2]; }; - TCseq = derive2 { name="TCseq"; version="1.12.1"; sha256="0xfbvr1qah0vwa5g15jpbzdqx4x3dkygdg6p92k67ip1qwsjar26"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; }; - TDARACNE = derive2 { name="TDARACNE"; version="1.38.0"; sha256="1k59i57nq2k8a5ih8i8ikyim9i4nr41s74anggbgwnpypdxbvrdy"; depends=[Biobase GenKern Rgraphviz]; }; - TEQC = derive2 { name="TEQC"; version="4.10.0"; sha256="1bb2yar0qjlpr5zw5ld4pmvgn3ni3fz6n01q7j8a8zs9ql8jiqjk"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; - TFARM = derive2 { name="TFARM"; version="1.10.0"; sha256="0w7rs22wga1xjyqfg500lcfd0yaajgck7jkpp510daksw9f0xw9r"; depends=[arules fields GenomicRanges gplots stringr]; }; - TFBSTools = derive2 { name="TFBSTools"; version="1.26.0"; sha256="0xa9f8acw5f4xfkfz0b8g0k4y892an7csfhf0cniqp6dr7255zsz"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; - TFEA_ChIP = derive2 { name="TFEA.ChIP"; version="1.8.0"; sha256="06xs43nppvwwp55z81zp7fd0bnq06rghmacblf8h6bkcpvb69n8v"; depends=[biomaRt dplyr GenomicFeatures GenomicRanges IRanges org_Hs_eg_db R_utils]; }; - TFHAZ = derive2 { name="TFHAZ"; version="1.10.0"; sha256="12r8g4kd6rh1yir30bx53ccpf0x63s6s1il64gigwi2yswqk6a88"; depends=[GenomicRanges IRanges S4Vectors]; }; - TFutils = derive2 { name="TFutils"; version="1.8.0"; sha256="0mri86dwxbihmnkrr8jfnf02bvg8kd99b1vx62wgp1vmajkzlpbc"; depends=[dplyr GSEABase magrittr miniUI Rsamtools shiny]; }; - TIN = derive2 { name="TIN"; version="1.20.0"; sha256="1vcqz6gw25kfw79dkr7gxblf8prdk57sq9yib5pk6wsz75cmgf10"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; - TMixClust = derive2 { name="TMixClust"; version="1.10.0"; sha256="0lzzfwcl0zvhjyzjq88n8fr90spw6b35slbmgxmca0lc3py12gwi"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; }; - TNBC_CMS = derive2 { name="TNBC.CMS"; version="1.4.0"; sha256="114w957i392yls73w33qcmw2ynyfc415y8gdvqh6p3k6kyiv7c90"; depends=[e1071 forestplot GGally ggplot2 ggpubr GSVA pheatmap pracma quadprog R_utils RColorBrewer SummarizedExperiment survival]; }; - TOAST = derive2 { name="TOAST"; version="1.2.0"; sha256="1q7xan3qwmxjr0l8mlxi97khnp5h22r2q84vgca4wl9s9j5rz7vl"; depends=[EpiDISH limma nnls RefFreeEWAS SummarizedExperiment]; }; - TPP = derive2 { name="TPP"; version="3.16.5"; sha256="0flaz2p6j4rlk65589i1f6d9m8spis19h51lc0is9rdbqzz721xb"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown stringr tibble tidyr VennDiagram VGAM]; }; - TPP2D = derive2 { name="TPP2D"; version="1.4.1"; sha256="0r790nr2x5blnphsvb4xmjq6n9ivrrdihaxxpp2f9hg14rdi1l47"; depends=[BiocParallel doParallel dplyr foreach ggplot2 limma MASS openxlsx RCurl stringr tidyr]; }; - TRONCO = derive2 { name="TRONCO"; version="2.20.1"; sha256="0nq2nmb69wabblal845llyx89fqna1rk2kjj0aw0scm0gydrs232"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; - TSCAN = derive2 { name="TSCAN"; version="1.26.0"; sha256="0hvrnva8lanr97p34i6irx8i6gskdk9jsa1mj6jhh7jlb0khv7d9"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; }; - TSRchitect = derive2 { name="TSRchitect"; version="1.14.0"; sha256="06vkd7k8kvmgh5ry1ky7h2f5dn3d2dahn8hb0n70hlnwrfa6ds7w"; depends=[AnnotationHub BiocGenerics BiocParallel dplyr GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges readxl Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - TTMap = derive2 { name="TTMap"; version="1.10.0"; sha256="10b1r9pmdqsxfxblyd0mqg6ny109pmw1jvwss3a9szdx5v2ml6n6"; depends=[Biobase colorRamps rgl SummarizedExperiment]; }; - TVTB = derive2 { name="TVTB"; version="1.14.0"; sha256="0kpl9x5i3fmarsgvy2zwnjc8ng2w63vyqzggxwlqirk0h0psk1l1"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; }; - TarSeqQC = derive2 { name="TarSeqQC"; version="1.18.0"; sha256="13p5qx0zsl47xwckxfzxkdx4vvdn8nz8r8xryrnx83xfh8ydkbw3"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; - TargetScore = derive2 { name="TargetScore"; version="1.26.0"; sha256="110ym72whwsjvzwn1byash37k6ihnwwlwnkdcbg2k6jnb3ml33nv"; depends=[Matrix pracma]; }; - TargetSearch = derive2 { name="TargetSearch"; version="1.44.0"; sha256="0nlq91ksabcalvmpw7y1ycp00bs06mvhcymxx43dkq94w4idrv2c"; depends=[assertthat ncdf4 stringr]; }; - TimeSeriesExperiment = derive2 { name="TimeSeriesExperiment"; version="1.6.0"; sha256="1k0djvcsyjj1ayncvmi8nlqi3jdn5qp41y3fwsqg1cp0qsvx7zv3"; depends=[DESeq2 dplyr dynamicTreeCut edgeR ggplot2 Hmisc limma magrittr proxy S4Vectors SummarizedExperiment tibble tidyr vegan viridis]; }; - TissueEnrich = derive2 { name="TissueEnrich"; version="1.8.0"; sha256="177j98r30zp9pghymi92zkkq06ijm0nz57l5b8kdq9h633w6dlvx"; depends=[dplyr ensurer ggplot2 GSEABase SummarizedExperiment tidyr]; }; - TitanCNA = derive2 { name="TitanCNA"; version="1.26.0"; sha256="1q1c3w4kvbrp4arwvhvanddd1l552jl9lrmgicjsccqlqvdgafxi"; depends=[BiocGenerics data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges VariantAnnotation]; }; - TnT = derive2 { name="TnT"; version="1.10.0"; sha256="1p6x2ly3xqdzwh0ml9y03vrb80lwpzv1vbvlfsg0563cy1qm1hil"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; }; - ToPASeq = derive2 { name="ToPASeq"; version="1.22.0"; sha256="04bd54xy2qhccbj8mpa3c7lgzf54q2lxprh9zxv5jirplkmklkf0"; depends=[Biobase corpcor graph graphite gRbase limma RBGL Rcpp SummarizedExperiment]; }; - TransView = derive2 { name="TransView"; version="1.32.0"; sha256="1bcyz9hk4vqlv6nv70m146fs3ha2x89vpli56g3n7rz718q79yj2"; depends=[BiocGenerics GenomicRanges gplots IRanges Rhtslib S4Vectors zlibbioc]; }; - TreeAndLeaf = derive2 { name="TreeAndLeaf"; version="1.0.0"; sha256="0g7fd5l0r4sqc35cfw4dx7sskb89ikyr7xkmc8qx7y3hj57kidpp"; depends=[ape igraph RedeR]; }; - TreeSummarizedExperiment = derive2 { name="TreeSummarizedExperiment"; version="1.4.8"; sha256="1cs7w9yl2nc2dl96pghpvxhqw586lw7cblhsmhl22m50n7d92wj4"; depends=[ape BiocGenerics dplyr rlang S4Vectors SingleCellExperiment SummarizedExperiment]; }; - Trendy = derive2 { name="Trendy"; version="1.10.0"; sha256="0snsipp212s4f646pk5r7hychbkf4xjyfng8pmawss9h1qsig32f"; depends=[BiocParallel DT gplots magrittr S4Vectors segmented shiny shinyFiles SummarizedExperiment]; }; - TurboNorm = derive2 { name="TurboNorm"; version="1.36.0"; sha256="17jxsgi3096xcyfddanqm38cd1gm5agmxzqcpyr07ys7snqy9vdf"; depends=[affy convert lattice limma marray]; }; - TxRegInfra = derive2 { name="TxRegInfra"; version="1.8.0"; sha256="07z97cs3dv4d3a5q36k8lslg2ic8r3f8dhk0hq4d52r2wcg8axnx"; depends=[BiocParallel GenomeInfoDb GenomicRanges IRanges mongolite RaggedExperiment rjson S4Vectors SummarizedExperiment]; }; - TypeInfo = derive2 { name="TypeInfo"; version="1.54.0"; sha256="0n87i1r67mnj1zjzrb7mrjpnailwhcg09pnhy6yhw1r0cmr5m408"; depends=[]; }; - UNDO = derive2 { name="UNDO"; version="1.30.0"; sha256="0cyar3ihskfqmxh1k2n5nm9f28ykizcradnzam8cijdp99xk7w0n"; depends=[Biobase BiocGenerics boot MASS nnls]; }; - Ularcirc = derive2 { name="Ularcirc"; version="1.6.0"; sha256="0g11gv4swahm7lq2lm9jzmzqkbd32lhwxp2h5ksrqm1l4ay81565"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings BSgenome data_table DT GenomeInfoDb GenomeInfoDbData GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel gsubfn mirbase_db moments Organism_dplyr S4Vectors shiny shinydashboard shinyFiles shinyjs Sushi yaml]; }; - UniProt_ws = derive2 { name="UniProt.ws"; version="2.28.0"; sha256="020gdjdkwgzgzp5pw9m7ddf0p83r19pw2ank057drdsz1kwdvpj8"; depends=[AnnotationDbi BiocFileCache BiocGenerics rappdirs RCurl RSQLite]; }; - Uniquorn = derive2 { name="Uniquorn"; version="2.8.0"; sha256="0c134p1s6rxlchf2486ygnknjygc7b5x9bisa6x7s6ycq0g5bm0q"; depends=[doParallel foreach GenomicRanges IRanges R_utils stringr VariantAnnotation WriteXLS]; }; - VCFArray = derive2 { name="VCFArray"; version="1.4.0"; sha256="1wck7rdvbzl1hg08n6ynyqqa0dswqczqzp70n2h138a588j9c0ry"; depends=[BiocGenerics DelayedArray GenomicFiles GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; - VanillaICE = derive2 { name="VanillaICE"; version="1.50.0"; sha256="0mh6y7zf464qy1qvxhcngp2lc61nmp6c3jzwvbxvbsdasj1wqcps"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; - VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.34.0"; sha256="09y6ymwky839nb0y7y93w810hk9mvwqn7595q1276c28dkddiqvw"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; - VariantExperiment = derive2 { name="VariantExperiment"; version="1.2.0"; sha256="1g6khmhcpd36hq3vl80b69ib1jsczybb148kfmhk20sxkzdbwzja"; depends=[Biostrings DelayedArray DelayedDataFrame GDSArray gdsfmt GenomicRanges IRanges S4Vectors SeqArray SeqVarTools SNPRelate SummarizedExperiment]; }; - VariantFiltering = derive2 { name="VariantFiltering"; version="1.24.0"; sha256="0lsrnybsbm9siyjv4nal6bmprj8ynwgk4n1145f4h52g78wq3br4"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny shinyjs shinythemes shinyTree SummarizedExperiment VariantAnnotation XVector]; }; - VariantTools = derive2 { name="VariantTools"; version="1.30.0"; sha256="0g93rljlmhk1d53z0bgi84i2cn5c3r1dpm8id2pv0nk9ncdh3yxx"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - Vega = derive2 { name="Vega"; version="1.35.0"; sha256="08c5l8ryk2fpzqm9s9m4p21w9wfawp54zjyxhxg0g2whr69lxxv2"; depends=[]; }; - VegaMC = derive2 { name="VegaMC"; version="3.26.0"; sha256="0xwvvylj4wfmgnfz6fsdvybza98qa7aag1h4pjmkq5nsypxqd71b"; depends=[Biobase biomaRt genoset]; }; - VennDetail = derive2 { name="VennDetail"; version="1.4.0"; sha256="1c2gpg2jpmf7w2rv8hy2r5xnbr7rkxnhi2h596hz9nb6bkas158a"; depends=[dplyr futile_logger ggplot2 magrittr purrr tibble UpSetR VennDiagram]; }; - ViSEAGO = derive2 { name="ViSEAGO"; version="1.2.0"; sha256="06w36pxas7fh3x2rm4yj068rzwdkhyxvnja3kgyqv4w4xwc2k3j9"; depends=[AnnotationDbi AnnotationForge biomaRt data_table dendextend DiagrammeR DT dynamicTreeCut ggplot2 GO_db GOSemSim heatmaply htmlwidgets igraph plotly R_utils RColorBrewer scales topGO UpSetR webshot]; }; - Wrench = derive2 { name="Wrench"; version="1.6.0"; sha256="05dyk3yvbqrzvinv3ig8ad9wffwr14z715cicsbxwxpv5lq84wx6"; depends=[limma locfit matrixStats]; }; - XBSeq = derive2 { name="XBSeq"; version="1.20.0"; sha256="13br7x1q6dg8daxahskwq24f09wbxr8kyszl1z7dhc26bid2pvy0"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; - XCIR = derive2 { name="XCIR"; version="1.2.0"; sha256="1wr3n36yx1cki0j2jvjh0a4flzr1gq09n1nyp10lwa8f5g0np3iw"; depends=[biomaRt data_table ggplot2 IRanges readxl S4Vectors seqminer VariantAnnotation]; }; - XDE = derive2 { name="XDE"; version="2.34.0"; sha256="1k9nd5vv77rchxwd0bc4n4ma484152d963kqipfialb7j0w5x513"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools MergeMaid mvtnorm RColorBrewer siggenes]; }; - XINA = derive2 { name="XINA"; version="1.6.0"; sha256="0k3w3cbp7gv1pv0ylz6gq619hq0i4dm2955s4pawfm7lgh5nls3m"; depends=[alluvial ggplot2 gridExtra igraph mclust plyr STRINGdb]; }; - XVector = derive2 { name="XVector"; version="0.28.0"; sha256="11h1hszv4798q1gbx8r6zf8vlaqx4v9ql0lbh2xaxybp66a03pvc"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; - Xeva = derive2 { name="Xeva"; version="1.4.0"; sha256="0x5gg018bgmv9dpawzpqf64k05rdrhwk30zxd4yfbxxfq8r7pa8m"; depends=[BBmisc Biobase ComplexHeatmap doParallel downloader ggplot2 nlme PharmacoGx Rmisc scales]; }; - YAPSA = derive2 { name="YAPSA"; version="1.14.0"; sha256="06lkf01vl4fyhj82srx8k870fhw76a1han0kp4jglh43b1c19c1k"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 circlize ComplexHeatmap corrplot dendextend doParallel dplyr GenomeInfoDb GenomicRanges GetoptLong ggbeeswarm ggplot2 gridExtra gtrellis KEGGREST lsei magrittr PMCMR pracma reshape2 SomaticSignatures VariantAnnotation]; }; - a4 = derive2 { name="a4"; version="1.36.0"; sha256="1rzxg1h48jnlwqfjyyqzz6i3zlkfzc0i714rfplry7dyni6asgr7"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; - a4Base = derive2 { name="a4Base"; version="1.36.0"; sha256="0b7fy1wcydb9z43wb1663skswvhivn7ji15g00gqcshwkkiq4x02"; depends=[a4Core a4Preproc annaffy AnnotationDbi Biobase genefilter glmnet gplots limma mpm multtest]; }; - a4Classif = derive2 { name="a4Classif"; version="1.36.0"; sha256="0bj8m4nprw3maahd1qx9jjdxfip9ihbbpydbzwjxn6dlgw2i8mcr"; depends=[a4Core a4Preproc glmnet MLInterfaces pamr ROCR varSelRF]; }; - a4Core = derive2 { name="a4Core"; version="1.36.0"; sha256="1hn9lkaib1bx5n52as882f8zwsln8w40sx8hxbrnimjvgfxrbvnp"; depends=[Biobase glmnet]; }; - a4Preproc = derive2 { name="a4Preproc"; version="1.36.0"; sha256="1hy3jvhdjyjzzmw5wkil3cs26hvqnb056r09x0p2bjg5sc9hh8b8"; depends=[AnnotationDbi]; }; - a4Reporting = derive2 { name="a4Reporting"; version="1.36.0"; sha256="1jhlxqwfbgflcyzy9gyxznzcadj9zxchl3lfdlc4ffm0hwz5jl2f"; depends=[annaffy xtable]; }; - aCGH = derive2 { name="aCGH"; version="1.66.0"; sha256="0zmxxg2lfxf484abm580qn0zdpavcmxw1f7g25cf0bh6zl03mifj"; depends=[Biobase cluster multtest survival]; }; - abseqR = derive2 { name="abseqR"; version="1.6.0"; sha256="0pzyfn0jv41rja6l4jbgwgsqy0q1d3kz23m9m6pc67p2a231i9c5"; depends=[BiocParallel BiocStyle circlize flexdashboard ggcorrplot ggdendro ggplot2 gridExtra knitr plotly plyr png RColorBrewer reshape2 rmarkdown stringr vegan VennDiagram]; }; - acde = derive2 { name="acde"; version="1.18.0"; sha256="0rvvniwl0gj6a4qbkgv813ra1xdc6rywdkx49zg9q368l7fiy1vl"; depends=[boot]; }; - adSplit = derive2 { name="adSplit"; version="1.58.0"; sha256="0ypznp0xbf3kwlia4nzl3jj0c7v91grc4hf33hx8bxid5h14rarl"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; }; - adaptest = derive2 { name="adaptest"; version="1.7.1"; sha256="0bd1yz32jwx5zr1fhppwkji2d689agjw3iqxjxl8z5j91jmxzaa9"; depends=[calibrate origami S4Vectors SummarizedExperiment tmle]; }; - adductomicsR = derive2 { name="adductomicsR"; version="1.4.0"; sha256="15xmfmxszzpw27hcnjgqf4cvmvrr43gh00v805lrb44w8kw3b8jf"; depends=[adductData ade4 AnnotationHub bootstrap data_table doSNOW dplyr DT ExperimentHub fastcluster foreach fpc mzR OrgMassSpecR pastecs pracma RcppEigen reshape2 rvest smoother zoo]; }; - affxparser = derive2 { name="affxparser"; version="1.60.0"; sha256="0d4hq1w0a3dm4bg9qsv7wqrbv2y7b9gllxfmnqs9n2nnwmvgi8yq"; depends=[]; }; - affy = derive2 { name="affy"; version="1.66.0"; sha256="0m6hkyjxmsf80n3anhwh9k26csxczv6v92fkb7klnchdski61pyc"; depends=[affyio Biobase BiocGenerics BiocManager preprocessCore zlibbioc]; }; - affyContam = derive2 { name="affyContam"; version="1.46.0"; sha256="1dh5c3blk2dl9kg13y6snplnx61x2f9hvp5lc7jmg25xk916517i"; depends=[affy affydata Biobase]; }; - affyILM = derive2 { name="affyILM"; version="1.40.0"; sha256="0pinfxwywch20bzw66rq83z0phkzzdjm1zjl8avs6n16dfkxnb7q"; depends=[affxparser affy Biobase gcrma]; }; - affyPLM = derive2 { name="affyPLM"; version="1.64.0"; sha256="1skhsfr5kmyjyyn2f172qijzrs1xcyh4fx6g384lsxpgjadkmmn3"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; - affyPara = derive2 { name="affyPara"; version="1.48.0"; sha256="03aipivjy8xialvrl98sgi1gc6jhnq4izhhllxm8hrjsxbq8vi5r"; depends=[affy affyio aplpack snow vsn]; }; - affyQCReport = derive2 { name="affyQCReport"; version="1.66.0"; sha256="1zvk5qxi99a8991fc6y8dx4pk3ky5x5l21llmz8rzha6pv82yxsm"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; }; - affycomp = derive2 { name="affycomp"; version="1.64.0"; sha256="0zg8dshas5b2ny4pnxxxqihnr4l20666ivrgglb939a23mplgps0"; depends=[Biobase]; }; - affycoretools = derive2 { name="affycoretools"; version="1.60.1"; sha256="0cnb54b3kmg9rnycvaz949bdali9n98qzrw7gwka6abmg1lv232s"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 Glimma GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; }; - affyio = derive2 { name="affyio"; version="1.58.0"; sha256="0j1f61409yq6hmkqrpzamfm7dx35rlq33ccs7wb1qcqx3d3nb75q"; depends=[zlibbioc]; }; - affylmGUI = derive2 { name="affylmGUI"; version="1.62.0"; sha256="1bdxslf7615a8vxy06da049r1w4m8nmwzmrqvyhszhi0snb2ycjf"; depends=[affy affyio affyPLM AnnotationDbi BiocGenerics BiocManager gcrma limma R2HTML tkrplot xtable]; }; - agilp = derive2 { name="agilp"; version="3.20.0"; sha256="0wgwrl6ip7kcl2qvbmrdmrxsc53fyjfgrmqfvyi609ip7pf7js6n"; depends=[]; }; - alevinQC = derive2 { name="alevinQC"; version="1.4.0"; sha256="07fsy956pswj47n1agxzz1526wlffm6pf817rx19mb7wk61p0gsw"; depends=[cowplot dplyr DT GGally ggplot2 rjson rlang rmarkdown shiny shinydashboard tximport]; }; - alpine = derive2 { name="alpine"; version="1.14.0"; sha256="017gkfk3x57nyd78pqhlygivgzdgw7ww5wd923v4dc8cvvd8scnf"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; }; - alsace = derive2 { name="alsace"; version="1.24.0"; sha256="0hdjq38mq4s7bcad2zw3509y5hv7019lzw8jgapfgc3xphz4jmjr"; depends=[ALS ptw]; }; - altcdfenvs = derive2 { name="altcdfenvs"; version="2.50.0"; sha256="11f5348xvhqq2hds0ncj83lg2j9ddl1wm7a3lcqyjp57z2p8li7i"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; }; - amplican = derive2 { name="amplican"; version="1.10.1"; sha256="03yidcwqw1nq5ddpip0ynmk39gasa1ig3rrms9kad3hvjx6vjar5"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats Rcpp rmarkdown S4Vectors ShortRead stringr waffle]; }; - animalcules = derive2 { name="animalcules"; version="1.4.0"; sha256="1zw3xqpn8hzw9ldqvpbrrz36nj50yg0gps46bybs58bcpma755ay"; depends=[ape assertthat biomformat caret covr DESeq2 DMwR dplyr DT forcats ggplot2 glmnet lattice limma magrittr Matrix MultiAssayExperiment plotly plotROC reactable rentrez reshape2 S4Vectors scales shiny shinyjs SummarizedExperiment tibble tsne umap vegan XML]; }; - annaffy = derive2 { name="annaffy"; version="1.60.0"; sha256="1rc9fb83by9jfgwfj2zhhbj93v296blwd8jl2rh7jj200mrpznn4"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; }; - annmap = derive2 { name="annmap"; version="1.30.0"; sha256="06nmcyiqlsdvm7ip5pipcqkda0v4838jnm8qvq8vwc9s66jb6a90"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; - annotate = derive2 { name="annotate"; version="1.66.0"; sha256="1ivszqknryq6n5a85z8zj12fvgcs6zz3zlza8q08pl6cs4m5rm4w"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; }; - annotationTools = derive2 { name="annotationTools"; version="1.62.0"; sha256="1b1yfnknr9vbn4y2mxdfyx57i5jbabhp9pwx8axlg2a7lawkfmdk"; depends=[Biobase]; }; - annotatr = derive2 { name="annotatr"; version="1.14.0"; sha256="0z3ydcybd81w543fw8fiblghndx5m28w8qsphh5vqj726i0nj8cl"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges readr regioneR reshape2 rtracklayer S4Vectors]; }; - anota = derive2 { name="anota"; version="1.36.0"; sha256="1ind5cyq85l63xpqmg2n9rg805s5amh48iiw05zqr8kih6hlilpm"; depends=[multtest qvalue]; }; - anota2seq = derive2 { name="anota2seq"; version="1.10.0"; sha256="1wjlf3h56bdr88m5xzfnnhpybnihmm15jq6jxalm41fnqvw1pxn0"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; - antiProfiles = derive2 { name="antiProfiles"; version="1.28.0"; sha256="13gxbzmd23jv0hcd4ibz5ws305anwhnhksajmqdvzc363xy9m8wd"; depends=[locfit matrixStats]; }; - apComplex = derive2 { name="apComplex"; version="2.54.0"; sha256="0r4ggh9yl70aidcnzyinzyd4jl9rlack7mna3vzfjmii49xb7a4g"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; - apeglm = derive2 { name="apeglm"; version="1.10.0"; sha256="1dja9x7fyzlzzr03c3r5gc3q123cs08kf0mawsbg1hy7bqh639di"; depends=[emdbook GenomicRanges Rcpp RcppEigen RcppNumerical SummarizedExperiment]; }; - appreci8R = derive2 { name="appreci8R"; version="1.6.0"; sha256="0z4ywqmynj56ib44i823ckaw4ka2d5hajb0v8bgs2zj8mm6fl7fa"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 COSMIC_67 DT GenomicFeatures GenomicRanges GenomicScores Homo_sapiens IRanges MafDb_1Kgenomes_phase3_hs37d5 MafDb_ExAC_r1_0_hs37d5 MafDb_gnomADex_r2_1_hs37d5 openxlsx PolyPhen_Hsapiens_dbSNP131 rentrez Rsamtools rsnps S4Vectors seqinr shiny shinyjs SIFT_Hsapiens_dbSNP137 SNPlocs_Hsapiens_dbSNP144_GRCh37 stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation XtraSNPlocs_Hsapiens_dbSNP144_GRCh37]; }; - aroma_light = derive2 { name="aroma.light"; version="3.18.0"; sha256="19y5f2minx2pp73zdh43v1qkwpkaxygkl8cwlnwja15i46s0bcyc"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; - arrayMvout = derive2 { name="arrayMvout"; version="1.46.0"; sha256="1gphcjplhjzswzipfvlsvjq2a0jqcy8yiz4i6nyizlq5iarmbxmm"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; }; - arrayQuality = derive2 { name="arrayQuality"; version="1.66.0"; sha256="1abyylcvy5wg6xcdrjfhyc02mzm99sd1nfqzzj1241niih2zg9an"; depends=[gridBase hexbin limma marray RColorBrewer]; }; - arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.44.0"; sha256="0k2l4rcds5d4yhxsi492j4q89gwbd72dq4aqdip57j9drf00ndya"; depends=[affy affyPLM beadarray Biobase genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG svglite vsn XML]; }; - artMS = derive2 { name="artMS"; version="1.6.5"; sha256="1pq35d18sknkqbgp1yawd66380bz8b8xgncpfj5kf188ascvbq18"; depends=[AnnotationDbi biomaRt bit64 circlize cluster ComplexHeatmap corrplot data_table dplyr factoextra FactoMineR getopt ggdendro ggplot2 ggrepel gplots gProfileR limma MSstats openxlsx org_Hs_eg_db org_Mm_eg_db PerformanceAnalytics pheatmap plotly plyr RColorBrewer scales seqinr stringr tidyr UpSetR VennDiagram yaml]; }; - atSNP = derive2 { name="atSNP"; version="1.3.0"; sha256="0bp19w9zcxn3qwssxr35bj4dgscr1qbiwcwzqsq866pbnkj77pyj"; depends=[BiocFileCache BiocParallel BSgenome data_table ggplot2 motifStack rappdirs Rcpp testit]; }; - attract = derive2 { name="attract"; version="1.40.0"; sha256="1qzg3ksv0v4crrizs0lbfz23lpssp52pcs39m885favb4v34wyp3"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; }; - bacon = derive2 { name="bacon"; version="1.16.0"; sha256="066b9vyp8ivnzm9741mb5z763a7z40ar9m8w31yw84fjiv01v3dl"; depends=[BiocParallel ellipse ggplot2]; }; - ballgown = derive2 { name="ballgown"; version="2.20.0"; sha256="0ipy9ixg3skf7fwgzgpidjxrkvl37cy5ghnm2lraby6411drz2hd"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; - bamsignals = derive2 { name="bamsignals"; version="1.20.0"; sha256="0p858xxfv79yc8b3lq58zl9f00irvbn3czsd8wdi5040xg42m402"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; - banocc = derive2 { name="banocc"; version="1.12.0"; sha256="1974bs41hh67cdl4pahp6swix1m44zrvgvdgilf6qginzkhd2hca"; depends=[coda mvtnorm rstan stringr]; }; - basecallQC = derive2 { name="basecallQC"; version="1.12.0"; sha256="0v1f0fs7dj1k0aaz4ggcs5bsnx968s04rynak5c915dwk4qcz5nv"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; }; - basilisk = derive2 { name="basilisk"; version="1.0.2"; sha256="1649c6cd2cyra49kmi5bhvsxd8m5appp3swlxwacmzhxjhz4pz64"; depends=[basilisk_utils reticulate]; }; - basilisk_utils = derive2 { name="basilisk.utils"; version="1.0.4"; sha256="18gj6vswd8c3m0kf7sya6a4d77jiswn9grnhh756g7l0hz0i6v0i"; depends=[rappdirs]; }; - batchelor = derive2 { name="batchelor"; version="1.4.0"; sha256="11c8an3qcrlxqr4zf0zldskqnp4dj5cipa80lmngpf0c2a3b6gli"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats igraph Matrix Rcpp S4Vectors scater SingleCellExperiment SummarizedExperiment]; }; - bayNorm = derive2 { name="bayNorm"; version="1.6.0"; sha256="0d72sarxn6zjy33k06l70wzlpdcdw5zff3anmb3jjbrnf251wwi6"; depends=[BB BiocParallel doSNOW fitdistrplus foreach iterators locfit MASS Matrix Rcpp RcppArmadillo RcppProgress SingleCellExperiment SummarizedExperiment]; }; - baySeq = derive2 { name="baySeq"; version="2.22.0"; sha256="1x0d34pqv9s15nmmxsfbw0ycxbf5348mi30ahycarjkjsyzycymj"; depends=[abind edgeR GenomicRanges]; }; - bcSeq = derive2 { name="bcSeq"; version="1.10.0"; sha256="1rwgdrjwvlq7lazixx1g9pb6rb1h3ksffh9sscjgz94h808dmkwy"; depends=[Biostrings Matrix Rcpp]; }; - beachmat = derive2 { name="beachmat"; version="2.4.0"; sha256="1vl6jbf9ia78cm4ikdb8vz04jv4b46zhvg5i006c63a9pzw7zhxi"; depends=[BiocGenerics DelayedArray Matrix]; }; - beadarray = derive2 { name="beadarray"; version="2.38.0"; sha256="1yg0039zyj0azb28kz6ljrd2nwc7afvncmqqsi0d72fjlznh6rrh"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 hexbin illuminaio IRanges limma reshape2]; }; - beadarraySNP = derive2 { name="beadarraySNP"; version="1.54.0"; sha256="0c6fhl9h1f3rm9a1qi5p8jfaj94iffjg2jzdksns2mf2mcjhky4k"; depends=[Biobase quantsmooth]; }; - bgafun = derive2 { name="bgafun"; version="1.49.0"; sha256="0hp1kljv7dx6p3g4k9frsrgspg2gfr1mnypgwz05f6ll3zfjfm1c"; depends=[ade4 made4 seqinr]; }; - bgx = derive2 { name="bgx"; version="1.54.1"; sha256="0a10fg9n5p024jrmbis102gqpbz23sc6vdn1sal2697hlxikzb46"; depends=[affy Biobase gcrma Rcpp]; }; - bigPint = derive2 { name="bigPint"; version="1.4.0"; sha256="1m92ngkzimcc37byf0ziphrby8wmjd5hfa53gvfphgaakyj9bjg8"; depends=[DelayedArray dplyr GGally ggplot2 gridExtra hexbin Hmisc htmlwidgets plotly plyr RColorBrewer reshape shiny shinycssloaders shinydashboard stringr SummarizedExperiment tidyr]; }; - bigmelon = derive2 { name="bigmelon"; version="1.14.0"; sha256="1cryjhbiacm45g097rpqgbva49hs5vdx4y4h5h2v1gw4k78hwb4y"; depends=[Biobase BiocGenerics gdsfmt GEOquery methylumi minfi wateRmelon]; }; - bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.36.0"; sha256="053bqcd3p4i7agj43ccjxfz40a1sxrymd49vdpfq8ypslkwk7g0g"; depends=[bigmemory]; }; - bioCancer = derive2 { name="bioCancer"; version="1.16.0"; sha256="0zcp33bcxcgxfjgvcklasnw52l84j3khr1bk0wvi0q5xdaz6v3pa"; depends=[AlgDesign AnnotationFuncs Biobase cgdsr clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier htmlwidgets org_Hs_eg_db plyr r_import radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; }; - bioDist = derive2 { name="bioDist"; version="1.60.0"; sha256="17bvxk0anvsp29j5nbblvaymf8qgbj3sz4ir2l7wj8kb8jfi19cp"; depends=[Biobase KernSmooth]; }; - bioassayR = derive2 { name="bioassayR"; version="1.26.0"; sha256="1n0gsnxcl0lplqk8rs5ygxrxpx389ddl6wv3ciyz9g2xry5biyfy"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; - biobroom = derive2 { name="biobroom"; version="1.20.0"; sha256="06qcrprn58kbrr5kyw1jl6z88b9w9g8xs6rkhrbnz8k7rv373fhf"; depends=[Biobase broom dplyr tidyr]; }; - biobtreeR = derive2 { name="biobtreeR"; version="1.0.0"; sha256="1vl06mv3ns0bnxd5sjypidw5v1spjqz8gvrjm5x5cwsdgg9zrvqn"; depends=[httpuv httr jsonlite stringi]; }; - biocGraph = derive2 { name="biocGraph"; version="1.50.0"; sha256="1372bm4y3czqhpki10pnprxfkfncfcsy59zzvf8wj6q03acaavrj"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; - biocViews = derive2 { name="biocViews"; version="1.56.2"; sha256="0kw0qfm1fw5yv2rbz6x23431rh0fnzj66f2bls7j285biyjmmx7w"; depends=[Biobase BiocManager graph RBGL RCurl RUnit XML]; }; - biomaRt = derive2 { name="biomaRt"; version="2.44.4"; sha256="1zx98zas8ngy5g2pmdvcv1b0afhh7v2skyimkjmbgmi99sswp09i"; depends=[AnnotationDbi BiocFileCache httr openssl progress rappdirs stringr XML xml2]; }; - biomformat = derive2 { name="biomformat"; version="1.16.0"; sha256="1l126nd1jmix4x3lh9my5nskc9bzbzrbz1brr23677vplfhrhy38"; depends=[jsonlite Matrix plyr rhdf5]; }; - biomvRCNS = derive2 { name="biomvRCNS"; version="1.28.0"; sha256="0bzw6pm0xgbi1gc3ybvf07hvih4k61hhpxk67gsqiq2w50010hp8"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; - biosigner = derive2 { name="biosigner"; version="1.16.0"; sha256="1v760q7hzaybkf2q9230rmr4phi8hglm59qwsjzvncxrhs3dpj06"; depends=[Biobase e1071 MultiDataSet randomForest ropls]; }; - biosvd = derive2 { name="biosvd"; version="2.23.0"; sha256="0piwwd2shwhflywp7rsq224hbd1g6av4a8hflzi29nd7xngrhv5f"; depends=[Biobase BiocGenerics NMF]; }; - biotmle = derive2 { name="biotmle"; version="1.12.0"; sha256="1la5g8shbas83j2v9ibzxrwc324bfi6ljj55ni7f6z15i39a5a32"; depends=[assertthat BiocGenerics BiocParallel doFuture dplyr drtmle future ggplot2 ggsci limma S4Vectors SummarizedExperiment superheat tibble]; }; - biovizBase = derive2 { name="biovizBase"; version="1.36.0"; sha256="1vq2mxa2jkljgw75zqjdkyml0ppi5dspvwj4cznfhi31cq8ds0qh"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer rlang Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - birta = derive2 { name="birta"; version="1.31.0"; sha256="00a1kcfmcgdbx6wpnhk45wm45bynhry5m93l9hm75j2rwyc4lnca"; depends=[Biobase limma MASS]; }; - biscuiteer = derive2 { name="biscuiteer"; version="1.2.0"; sha256="1d108y6d45hnagvd8afpnfa5jwkps1nsinyak1zwdas3dhwfl036"; depends=[Biobase BiocGenerics BiocParallel biscuiteerData bsseq data_table DelayedMatrixStats dmrseq GenomeInfoDb GenomicRanges gtools HDF5Array Homo_sapiens impute Matrix matrixStats Mus_musculus QDNAseq qualV R_utils readr Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - blacksheepr = derive2 { name="blacksheepr"; version="1.2.0"; sha256="0vz8b4r8fr2nlm3hbi150cdx3739m0rwddijyimjfvfhkn5d6fw4"; depends=[circlize ComplexHeatmap pasilla RColorBrewer SummarizedExperiment viridis]; }; - blima = derive2 { name="blima"; version="1.22.0"; sha256="1ndp1kajz1m80hafi6glkqcwk0w9sa7gc3d1y1c6ypxw0pgj59qh"; depends=[beadarray Biobase BiocGenerics Rcpp]; }; - bnbc = derive2 { name="bnbc"; version="1.10.0"; sha256="0xcrka3pq7aapsnsdh26d401wdnf6hyqskdnpc6jnx9dr76q33s7"; depends=[BiocGenerics data_table EBImage GenomeInfoDb GenomicRanges IRanges matrixStats preprocessCore Rcpp rhdf5 S4Vectors SummarizedExperiment sva]; }; - brainflowprobes = derive2 { name="brainflowprobes"; version="1.2.0"; sha256="12w73p9lf74qc856nhml0qnjirgb6skgya6mdrla4lxanvjlyh4j"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 bumphunter cowplot derfinder derfinderPlot GenomicRanges GenomicState ggplot2 RColorBrewer]; }; - branchpointer = derive2 { name="branchpointer"; version="1.14.0"; sha256="0jcs4blf8irwmixp225rrpp4daw4mr78p0vx8wg3cq01wjinkasb"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; }; - breakpointR = derive2 { name="breakpointR"; version="1.6.0"; sha256="16q3dy7wib835233frxlq1aljiya9fkckwx9j67s4llxpyjn0n53"; depends=[BiocGenerics breakpointRdata cowplot doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges Rsamtools S4Vectors]; }; - brendaDb = derive2 { name="brendaDb"; version="1.2.0"; sha256="18pwjm9rxdj02gi920y9jv7qgv5xkj98ir30lzmw42q6inmz2qvl"; depends=[BiocFileCache BiocParallel crayon curl dplyr magrittr purrr rappdirs Rcpp rlang stringr tibble tidyr xml2]; }; - bridge = derive2 { name="bridge"; version="1.52.0"; sha256="0cy35wcab4941s4136nqwwd27s4gqdgy06q0cvggld39jrpn467f"; depends=[rama]; }; - bsseq = derive2 { name="bsseq"; version="1.24.4"; sha256="0ymay9csrylpg6x9s7fgbr1mbw47skw9lqv2p7jn8fyilk2rbbcj"; depends=[beachmat Biobase BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit permute R_utils Rcpp rhdf5 S4Vectors scales SummarizedExperiment]; }; - bumphunter = derive2 { name="bumphunter"; version="1.30.0"; sha256="04y6spdx89j3bsq2xniqd3sbfmakwc0klbpzjlp1q2xs9kywr4dq"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; - cBioPortalData = derive2 { name="cBioPortalData"; version="2.0.10"; sha256="1fqm5hsdmx3v9x0ziwhjjhrjjfzm26i51as2wkmpnvn7y13zws1j"; depends=[AnVIL BiocFileCache digest dplyr GenomeInfoDb GenomicRanges httr IRanges MultiAssayExperiment RaggedExperiment readr RTCGAToolbox S4Vectors SummarizedExperiment TCGAutils tibble tidyr]; }; - cTRAP = derive2 { name="cTRAP"; version="1.6.1"; sha256="09fwxr40q6wcqiwdr8q75sr5njrfl48jp6dl68z9a7parmpmgv9q"; depends=[biomaRt cowplot data_table dplyr fgsea ggplot2 ggrepel httr limma pbapply R_utils readxl reshape2 rhdf5 scales]; }; - caOmicsV = derive2 { name="caOmicsV"; version="1.18.0"; sha256="1cfqw7xvr4sr3b14w7slrvw093m4933c7717l9inlv0dj7jkz4g9"; depends=[bc3net igraph]; }; - calm = derive2 { name="calm"; version="1.2.0"; sha256="09by842lv26psr85sck0n94w011kjav4bm5bx4kwji7vrd12m869"; depends=[mgcv]; }; - canceR = derive2 { name="canceR"; version="1.22.01"; sha256="0y9xnl3akw4hxygnrk85g2ricimsim3g2n5w78i4id59xa415v75"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; - cancerclass = derive2 { name="cancerclass"; version="1.32.0"; sha256="0zikhdxmv4925df3i6q701gwsvyxdjqm5n98ql358v8ws99laz8q"; depends=[binom Biobase]; }; - casper = derive2 { name="casper"; version="2.22.0"; sha256="0dwhazn4bqdlmrxidfa5jlkmyhm8qp6nz0nwckhm4xpq8275apz1"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; - categoryCompare = derive2 { name="categoryCompare"; version="1.32.0"; sha256="0ih0gkkxlg87x2mls90kcwxpwpp1gw2r1al9j5rrs1l547nzb978"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; }; - cbaf = derive2 { name="cbaf"; version="1.10.1"; sha256="05a8f7bvq7gnb576csz1fr3h78d1rijr99k9wlij6lyix4ws9i9x"; depends=[BiocFileCache cgdsr genefilter gplots RColorBrewer xlsx]; }; - ccfindR = derive2 { name="ccfindR"; version="1.8.0"; sha256="07dcfw1696naib55js4h0sqlw3fbw4hp6942wvshzjkpjkkmd4qn"; depends=[ape gtools irlba Matrix RColorBrewer Rcpp RcppEigen Rdpack Rmpi Rtsne S4Vectors SingleCellExperiment SummarizedExperiment]; }; - ccmap = derive2 { name="ccmap"; version="1.14.0"; sha256="1qjpjk3ljb2wsxk7bjbvx3qqvn57y9gafvrqmvhpr9z2kggdbda0"; depends=[AnnotationDbi BiocManager ccdata data_table doParallel foreach lsa xgboost]; }; - ccrepe = derive2 { name="ccrepe"; version="1.24.0"; sha256="0kyrrllpmrn2bbxyvfwxs1g9qvjxhisfw34b545z8hhjmdhlxlwk"; depends=[infotheo]; }; - ceRNAnetsim = derive2 { name="ceRNAnetsim"; version="1.0.0"; sha256="0j79b1gg709i23r776h37gydnvvbg0hi60wkwlp0r638263l3qr1"; depends=[dplyr furrr future ggplot2 ggraph igraph purrr rlang tibble tidygraph tidyr]; }; - celaref = derive2 { name="celaref"; version="1.6.0"; sha256="0k1vzwr91l4cdb81lqxil5302888q94qrwc1y237734ldkrj1bhh"; depends=[BiocGenerics DelayedArray dplyr ggplot2 magrittr MAST Matrix readr rlang S4Vectors SummarizedExperiment tibble]; }; - celda = derive2 { name="celda"; version="1.4.7"; sha256="1h3psbfv0az7n17bh3j3lanp6r2kmw5kxnja2qn50gny342wf1la"; depends=[data_table dbscan DelayedArray dendextend digest doParallel enrichR foreach ggdendro ggplot2 ggrepel gridExtra gtable MAST Matrix matrixStats MCMCprecision plyr pROC RColorBrewer Rcpp RcppEigen reshape2 Rtsne S4Vectors scales scater scran Seurat SingleCellExperiment stringi stringr SummarizedExperiment uwot withr]; }; - cellHTS2 = derive2 { name="cellHTS2"; version="2.52.0"; sha256="11h7jyysl98mqqa6224sxrmrl19jghl8b7p3lkni4qgri9n0wdd2"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; }; - cellTree = derive2 { name="cellTree"; version="1.18.0"; sha256="050hyrghmbgc2rw0x9jzx787gnapa7xh5djp16bw0s3h20xqw0gl"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; }; - cellbaseR = derive2 { name="cellbaseR"; version="1.12.0"; sha256="0n7sv3wy71p32hffhrkhvxaj98m7j63hf6576yi0srllxgffr991"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; }; - cellity = derive2 { name="cellity"; version="1.16.0"; sha256="1b3cxmrqvngv916dwixalavag8c5dff2bw6asmcg4f89iszhailm"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; - cellscape = derive2 { name="cellscape"; version="1.12.0"; sha256="04dz7ps1zm1ylwhfa8r5b7mf885rr6z2lsbzrvr40v73sda71xg3"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; }; - cghMCR = derive2 { name="cghMCR"; version="1.46.0"; sha256="19kpn5hxwbyz056gkx82n4ll47wh56p1z122rriazyn803ds1r32"; depends=[BiocGenerics CNTools DNAcopy limma]; }; - chimera = derive2 { name="chimera"; version="1.30.0"; sha256="0jichdhmylkq8clf1w4dnr2p9nrpxny5w5lsmr5zw7l609nycv7i"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - chimeraviz = derive2 { name="chimeraviz"; version="1.14.0"; sha256="0ip9xs7h7cxslwfkc4bf9axrx460jrbnn98h7b9rv5g3s38f1kly"; depends=[AnnotationDbi AnnotationFilter ArgumentCheck BiocStyle Biostrings data_table dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph gtools Gviz IRanges magick org_Hs_eg_db org_Mm_eg_db plyr RCircos RColorBrewer Rgraphviz rmarkdown Rsamtools S4Vectors]; }; - chipenrich = derive2 { name="chipenrich"; version="2.12.0"; sha256="10h4dc04n341q495bvzp1wl0zpmgvjyykyfryk2j5xnfp9gn3mmw"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra MASS mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; }; - chipseq = derive2 { name="chipseq"; version="1.38.0"; sha256="0lh859s0aq73vac1phcgagf6n000qgq2xsk0bmfr61n5swifml2a"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; - chopsticks = derive2 { name="chopsticks"; version="1.54.0"; sha256="1dncsaqqxpl2k5l17hzabr0likrv1ndgwjwkf0zlg2nic0g54w11"; depends=[survival]; }; - chromDraw = derive2 { name="chromDraw"; version="2.18.0"; sha256="1s9glhiz1y08wgjiffisfh1x4pilqgnyias8wprfhmr7c3ya8plk"; depends=[GenomicRanges Rcpp]; }; - chromPlot = derive2 { name="chromPlot"; version="1.16.0"; sha256="10y6vl2wlvsqy242rax19wp06czsy9j4x6vcw7lmfrj9pbwc65km"; depends=[biomaRt GenomicRanges]; }; - chromVAR = derive2 { name="chromVAR"; version="1.10.0"; sha256="0igzsa206m29r7fhpkgkyllii30rd4kbiwqby8nz2cz86znmmx5w"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; - chromstaR = derive2 { name="chromstaR"; version="1.14.1"; sha256="1y71ipmg1wacx9ga1jyfzxr39s30kxfy9qji77fhxmalasvp9gbm"; depends=[bamsignals BiocGenerics chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; }; - chromswitch = derive2 { name="chromswitch"; version="1.10.0"; sha256="1ii4shpbr3k5gpvw1l9ihvdc34qjbzgq05bj31v2p3a9p8wx6ii2"; depends=[Biobase BiocParallel cluster dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats NMF rtracklayer S4Vectors tidyr]; }; - cicero = derive2 { name="cicero"; version="1.6.2"; sha256="042ba6yfa7fksij2v7cwnp2sca3vmz7izn6fsxx9xswnncrkgcqh"; depends=[assertthat Biobase BiocGenerics data_table dplyr FNN GenomicRanges ggplot2 glasso Gviz igraph IRanges Matrix monocle plyr reshape2 S4Vectors stringi stringr tibble tidyr VGAM]; }; - circRNAprofiler = derive2 { name="circRNAprofiler"; version="1.2.1"; sha256="0x6acd7gfbna9dv5c459sg1k89kz8q9wpp96d3rfgrwjlssx6vmm"; depends=[AnnotationHub Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DESeq2 dplyr edgeR GenomeInfoDb GenomicRanges ggplot2 gwascat IRanges magrittr R_utils readr reshape2 rlang rtracklayer S4Vectors seqinr stringi stringr universalmotif]; }; - cisPath = derive2 { name="cisPath"; version="1.28.0"; sha256="0vc7j6j6f18hrvja38crmxq85hashwic21skfvz3379xv0qzhypj"; depends=[]; }; - cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.26.0"; sha256="1hjs1hjr6mb9iqy1ba10sc8mrhff4p8bra11gq9k4sc5axiwcdjp"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomeInfoDb GenomicRanges IRanges seqinr]; }; - cleaver = derive2 { name="cleaver"; version="1.26.1"; sha256="0mjk3xkqjw095n6aq6rwljmkynscqm5m95z2niipjk9irwfj83a9"; depends=[Biostrings IRanges S4Vectors]; }; - clippda = derive2 { name="clippda"; version="1.38.0"; sha256="1kzx95i4mdvnv2m58a6amjj148a4s1x8f52g3axvwpll8slbfim1"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; - clipper = derive2 { name="clipper"; version="1.28.0"; sha256="1m49qq8kkwjii230hnmzispjig5q6mp94hp8m7lllyqi3h6zfaac"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; - cliqueMS = derive2 { name="cliqueMS"; version="1.2.1"; sha256="088cfayniypslls17hyc3yywkscs9904apck9hl1pazrcvr98pj7"; depends=[BH igraph matrixStats MSnbase qlcMatrix Rcpp RcppArmadillo xcms]; }; - clonotypeR = derive2 { name="clonotypeR"; version="1.26.0"; sha256="1n15ffg16m4zcxpp5pzw71799v26qw1hik1vwrwdvckkzll1zgfy"; depends=[]; }; - clst = derive2 { name="clst"; version="1.36.0"; sha256="1d2z37n64axijj9l8gzpvxc4c25jp6vjanri67kzsdj87qvqf1k0"; depends=[lattice ROC]; }; - clstutils = derive2 { name="clstutils"; version="1.36.0"; sha256="1cs0b7svdy8a9w81hxw718b2i7mizijk2zhbad3n4jbgwn2w764l"; depends=[ape clst lattice rjson RSQLite]; }; - clustComp = derive2 { name="clustComp"; version="1.16.0"; sha256="1dda791njs1yk51kd4fxk16z0gd1wq5qfgb8amyvl7ik889ghc7h"; depends=[sm]; }; - clusterExperiment = derive2 { name="clusterExperiment"; version="2.8.0"; sha256="1ib4j5xfdx6pxgxl86dir8275k3s4xzxjzvrh7d61hb81gdyk0mw"; depends=[ape BiocGenerics cluster DelayedArray edgeR HDF5Array howmany kernlab limma locfdr Matrix matrixStats NMF phylobase pracma RColorBrewer Rcpp RSpectra S4Vectors scales SingleCellExperiment stringr SummarizedExperiment zinbwave]; }; - clusterProfiler = derive2 { name="clusterProfiler"; version="3.16.1"; sha256="11zsgb8wbdv8r4c04iczz4aala4yw4ai7rz8igdzz87c0940nxkb"; depends=[AnnotationDbi DOSE downloader dplyr enrichplot GO_db GOSemSim magrittr plyr qvalue rlang rvcheck tidyr]; }; - clusterSeq = derive2 { name="clusterSeq"; version="1.12.0"; sha256="18fgg8aqqhf5dg6jhi67dilnnca934wbmn0n9f3jqqylrcshr80z"; depends=[baySeq BiocGenerics BiocParallel]; }; - clusterStab = derive2 { name="clusterStab"; version="1.60.0"; sha256="1cm9hw13m90k6fxjcww0r0viq00lmpkafj69fz23gl82bbvb4l4x"; depends=[Biobase]; }; - clustifyr = derive2 { name="clustifyr"; version="1.0.0"; sha256="15qv2sqpqmc0slhqnwfixm0w006wzcz9pfhyx4pfaqp1wnn15nsc"; depends=[cowplot dplyr entropy fgsea ggplot2 Matrix matrixStats readr rlang S4Vectors scales SingleCellExperiment stringr SummarizedExperiment tibble tidyr]; }; - cmapR = derive2 { name="cmapR"; version="1.0.0"; sha256="10lax92s5r904yl4rlzwksyq3cyr86y3xa5mzapjn7hwrzcvdd1q"; depends=[data_table matrixStats prada rhdf5 SummarizedExperiment]; }; - cn_farms = derive2 { name="cn.farms"; version="1.36.0"; sha256="0rn1n3mxjm6aznq87mpcchbiqr5g72cbn8575a3v07mf1lkid7sr"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; - cn_mops = derive2 { name="cn.mops"; version="1.34.0"; sha256="08izmymym17wfc23yhpbjh6d1iib5w0nrhgmg5sawl7k33nlmyyc"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; - cnvGSA = derive2 { name="cnvGSA"; version="1.32.0"; sha256="14wr2akfyx2cqbbm5c399ivn7pnbshdnbkhc2ja7imxajd3nhcqh"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; - coGPS = derive2 { name="coGPS"; version="1.32.0"; sha256="0ls826knkyig2l885kmj3dk098q8p1v7p6n7bdxwzaf02sz41mx6"; depends=[]; }; - coMET = derive2 { name="coMET"; version="1.20.0"; sha256="16w8dm9d8rb45x12khydzqmvnbq4q40i2x26j3mw1dgk4p1vmjc5"; depends=[biomaRt colortools corrplot GenomicRanges gridExtra Gviz hash IRanges psych rtracklayer S4Vectors]; }; - coRdon = derive2 { name="coRdon"; version="1.6.0"; sha256="0ivhmw8xyxck5wi9al1fpyjkphpyl9q76yp9yq59p1szrrwj6is8"; depends=[Biobase Biostrings data_table dplyr ggplot2 purrr stringr]; }; - cobindR = derive2 { name="cobindR"; version="1.25.0"; sha256="0y9rwp5ygfa0l8inggb69lcq8d42iqq6n3sh369zn69kpksx417f"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust seqinr yaml]; }; - codelink = derive2 { name="codelink"; version="1.56.0"; sha256="0qhks6pdcgix5gi3cp42kiwwphf0a3ndznv3cg77qsck4mxb8imy"; depends=[annotate Biobase BiocGenerics limma]; }; - coexnet = derive2 { name="coexnet"; version="1.10.3"; sha256="1wl2va62xphmg3xi68vr4vfnf4g9jxsqjr0i4w0mmsxmiv1zmb0s"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; }; - cogena = derive2 { name="cogena"; version="1.22.0"; sha256="1qhz17sly6q0ihd0z1346bhr0l660kn7yz9a1g8c8jdrkhjk8n4y"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2 stringr tibble tidyr]; }; - cola = derive2 { name="cola"; version="1.4.1"; sha256="1bnwjwl93v68azm0sflsknffiabywvqicy5icx5qc5425hpkapmm"; depends=[BiocGenerics brew circlize clue cluster ComplexHeatmap crayon digest eulerr GetoptLong GlobalOptions httr impute knitr markdown matrixStats mclust microbenchmark png RColorBrewer Rcpp skmeans xml2]; }; - combi = derive2 { name="combi"; version="1.0.0"; sha256="1v9lph8fffbivym93hj7v69s1ychfbl7nzv9bvixhkk46ynb1x74"; depends=[alabama BB Biobase cobs ggplot2 limma Matrix nleqslv phyloseq reshape2 SummarizedExperiment tensor vegan]; }; - compEpiTools = derive2 { name="compEpiTools"; version="1.22.0"; sha256="16rcab4blq8vymqymivmnrkdzalsxkq3wnib1dyai5pqfzgrbp5p"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; - compartmap = derive2 { name="compartmap"; version="1.6.0"; sha256="1z3h9fms8ng750sysbd402vfxp88w5xx62p25m742pi4634a4klq"; depends=[GenomicRanges gtools Homo_sapiens minfi mixOmics SummarizedExperiment]; }; - compcodeR = derive2 { name="compcodeR"; version="1.24.0"; sha256="09r7x2b4h140i9p07g45ayxvg8pa7r7dnqcv1m2d9qjyh6qhji3x"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; - consensus = derive2 { name="consensus"; version="1.6.1"; sha256="0709qh0vqyhvmjg545n48k81djvqkzsh9km654kyp55d57rd06ly"; depends=[gplots matrixStats RColorBrewer]; }; - consensusDE = derive2 { name="consensusDE"; version="1.6.0"; sha256="0cllzf6bnnwhyyc2mbsl3qbb6c7jf0isrxyyr438wx3mpvmm6rf7"; depends=[airway AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings data_table dendextend DESeq2 EDASeq edgeR EnsDb_Hsapiens_v86 ensembldb GenomicAlignments GenomicFeatures limma org_Hs_eg_db pcaMethods RColorBrewer Rsamtools RUVSeq S4Vectors SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm3_ensGene]; }; - consensusOV = derive2 { name="consensusOV"; version="1.10.0"; sha256="1x27dpn9pk2k0m5xr53zyk54kg93zjypq6jb1abwg1xj6f4zw9g4"; depends=[Biobase gdata genefu GSVA limma matrixStats randomForest]; }; - consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.16.0"; sha256="19x1apjymlxacb0y17pi197fqkdj7nv81rk1w0xxwb4i7iivdi00"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; }; - contiBAIT = derive2 { name="contiBAIT"; version="1.16.0"; sha256="1s646mky6pygapzg7zzgk5s7s88hyz3cbasn4lpj34gnq6hqa8pa"; depends=[BH BiocGenerics BiocParallel clue cluster colorspace data_table diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; - conumee = derive2 { name="conumee"; version="1.22.0"; sha256="0wprcaqmqkx70sgvs2yg9k683kih3ff5af6rw8hjnhl7gvpg3fyd"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; }; - convert = derive2 { name="convert"; version="1.64.0"; sha256="19dn3h4w60bdqvnjq6w8izsaiz7rpsbdpyzp1n73bm7zx15qxm16"; depends=[Biobase limma marray]; }; - copa = derive2 { name="copa"; version="1.56.0"; sha256="1x600vb8lzc8kkmhwgw364yf3y2p7ilbipf5scnxfgi97zmmcliw"; depends=[Biobase]; }; - copynumber = derive2 { name="copynumber"; version="1.28.0"; sha256="1b7v6xijpi2mir49cf83gpadhxm5pnbs6d8q8qga7y06hn9jx6my"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; - coseq = derive2 { name="coseq"; version="1.12.0"; sha256="1bqvc1bqmvl69dllxm7klgzkk325yrpd80i7awnbvrqva8k8mkbl"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; }; - cosmiq = derive2 { name="cosmiq"; version="1.22.0"; sha256="1n2dkp1bqk8lmr4x0y39kay0jnkpa73ilr5wslg01sjgk2rlq77h"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; - countsimQC = derive2 { name="countsimQC"; version="1.6.0"; sha256="0b9pc9sg3whyd9jwb5cb414lyjqwxgg0h20lf4n916ifpspncgbb"; depends=[caTools DESeq2 dplyr DT edgeR genefilter GenomeInfoDbData ggplot2 randtests rmarkdown SummarizedExperiment tidyr]; }; - covEB = derive2 { name="covEB"; version="1.14.0"; sha256="1ichrnyim50khykxn9aapm255b1zni0rxxmysx2j7hgdnn80n6jh"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; }; - covRNA = derive2 { name="covRNA"; version="1.14.0"; sha256="1h2imvfjiqdnficsal6ql0bsj6amfw0rldh72d83qgciag7mznry"; depends=[ade4 Biobase genefilter]; }; - cpvSNP = derive2 { name="cpvSNP"; version="1.20.0"; sha256="05cgsscblfmkrgpzcwxh7yvql5548z1fyv3hm2x6mzsxaymmr9cd"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; - cqn = derive2 { name="cqn"; version="1.34.0"; sha256="1c8kffr5w5nppn7casg30zg0jn646vpvippn2xvybp0y41481cdm"; depends=[mclust nor1mix preprocessCore quantreg]; }; - crisprseekplus = derive2 { name="crisprseekplus"; version="1.14.0"; sha256="0j7as1ghdv66kqxagbldh01vixqczlzq080g0q8pvnkzrwhkp18v"; depends=[AnnotationDbi BiocManager BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; }; - crlmm = derive2 { name="crlmm"; version="1.46.0"; sha256="0hr9pm5c0zmk7s4bknibqqwfk0i4z5ll6a4k2555g048d3n2s4m5"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen VGAM]; }; - crossmeta = derive2 { name="crossmeta"; version="1.14.0"; sha256="1i96cax37xi8npbxw1hpn0jm4zcnvqkgwpklz6isxlnk9h4pkv8c"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocManager ccmap data_table DBI doParallel doRNG DT fdrtool foreach GEOquery ggplot2 limma matrixStats metaMA metap miniUI oligo plotly RColorBrewer RCurl rdrop2 reader reshape RSQLite shiny stringr sva XML]; }; - csaw = derive2 { name="csaw"; version="1.22.1"; sha256="1qh4giiq61gsvrb84sjs5mgri7qiihvn8n6vf6lrg388nc3s9gbf"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; - ctc = derive2 { name="ctc"; version="1.62.0"; sha256="0lv126xj092hps3f3dsv7hasdyy26wcx8npl9idq2l4h9addk6v6"; depends=[amap]; }; - ctgGEM = derive2 { name="ctgGEM"; version="1.0.3"; sha256="1151kpz7d8mdvf3yq85m6hc4n7sdmrxiscgarf9f7ign1fkfhq1v"; depends=[Biobase BiocGenerics ggplot2 HSMMSingleCell igraph Matrix monocle sincell SummarizedExperiment TSCAN]; }; - ctsGE = derive2 { name="ctsGE"; version="1.14.0"; sha256="1zc59i09nk99ivqk4kjkvj4rj23czsfczwcb9zq010z9h2afy9yd"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; }; - cummeRbund = derive2 { name="cummeRbund"; version="2.30.0"; sha256="1av7yfxcq1wwbqfqcz7caiz5kf6kg5wq9qcg5v6yccihclzwvxjc"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; }; - customProDB = derive2 { name="customProDB"; version="1.28.0"; sha256="07bj1aq2vbz63m1pdri2nxx79q0kxmhqkfz61mqlcpc1x2z9dybi"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings DBI GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; }; - cycle = derive2 { name="cycle"; version="1.42.0"; sha256="0dgirkfgyd2fi7c75b72cz2xwjjwrfax2xs3klgj2w21ylqc86mq"; depends=[Biobase Mfuzz]; }; - cydar = derive2 { name="cydar"; version="1.12.0"; sha256="0f767cqdzxzx4bnch36xy11zpkmvf12hf1xzysh60jj7li1gbb7c"; depends=[Biobase BiocGenerics BiocNeighbors BiocParallel flowCore Rcpp S4Vectors shiny SingleCellExperiment SummarizedExperiment viridis]; }; - cytofast = derive2 { name="cytofast"; version="1.4.0"; sha256="048iis4mb6w57ih7pswcz2a7y0vm7fzcxmqrns6dnhfffxqbg6pv"; depends=[flowCore FlowSOM ggplot2 ggridges RColorBrewer Rdpack reshape2]; }; - cytolib = derive2 { name="cytolib"; version="2.0.3"; sha256="123d1wlymq8r8d83as380h1dgw6v4s317acyvp1lsg2cpfp3gslj"; depends=[BH Rcpp RcppArmadillo RcppParallel Rhdf5lib RProtoBufLib]; }; - cytomapper = derive2 { name="cytomapper"; version="1.0.0"; sha256="03xrxlm9sr2dknxz1jj4cc8b9kxm8y00g1127wkx23ccsxwp2pqw"; depends=[EBImage raster RColorBrewer S4Vectors SingleCellExperiment SummarizedExperiment viridis]; }; - daMA = derive2 { name="daMA"; version="1.60.0"; sha256="17asy4wy185fzaphy65dh1b1sm2ic16i6h9dys2327p4b9y1ldr7"; depends=[MASS]; }; - dada2 = derive2 { name="dada2"; version="1.16.0"; sha256="1ifdzqyfqv7kxigf35k9fccg87kw77bb6gwr3580vw3wqrgj3w90"; depends=[BiocGenerics Biostrings ggplot2 IRanges Rcpp RcppParallel reshape2 ShortRead XVector]; }; - dagLogo = derive2 { name="dagLogo"; version="1.26.2"; sha256="0b1rly29bslsvn1v7gbf77wh2260k3yr6ass99wc7klm6pz0vnxv"; depends=[BiocGenerics biomaRt Biostrings grImport2 motifStack pheatmap UniProt_ws]; }; - dcGSA = derive2 { name="dcGSA"; version="1.16.0"; sha256="0wv9jhiqnry1zgq9dw7w98c3ywv7avkkaxpiphgs1mkiqz3fvy66"; depends=[BiocParallel Matrix]; }; - dcanr = derive2 { name="dcanr"; version="1.4.0"; sha256="1rx06hjsjmv1y0s799idcpszjc56bm8qwyv668j8y0szy3gz9shv"; depends=[circlize doRNG foreach igraph Matrix plyr RColorBrewer reshape2 stringr]; }; - ddCt = derive2 { name="ddCt"; version="1.44.0"; sha256="0d80bcxs3skbqkn49p5aym972vm3cqnz34gh4kh5ddz4ix1d9l4l"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; - ddPCRclust = derive2 { name="ddPCRclust"; version="1.8.0"; sha256="1il123xc37pckj58nlh8vzbdmfwi9qqghdvkl5948c747swrfyy1"; depends=[clue flowCore flowDensity flowPeaks ggplot2 openxlsx plotrix R_utils SamSPECTRAL]; }; - dearseq = derive2 { name="dearseq"; version="1.0.0"; sha256="1v2w3b9z638vqwjqfssibkbjvydby4d73jqj5h87sbsapgjhcvqq"; depends=[CompQuadForm ggplot2 KernSmooth matrixStats pbapply statmod]; }; - debCAM = derive2 { name="debCAM"; version="1.6.0"; sha256="0ifbn3vmlrpi4d2ybqhvygndqa200h0hb0b47523fx0vw985f9k5"; depends=[apcluster Biobase BiocParallel corpcor DMwR geometry NMF nnls pcaPP rJava SummarizedExperiment]; }; - debrowser = derive2 { name="debrowser"; version="1.16.3"; sha256="0lqsagl0qwzikm6mw8mw8ygpvylzr4jz810fjm020a8h155pwp2g"; depends=[annotate AnnotationDbi clusterProfiler colourpicker DESeq2 DOSE DT edgeR enrichplot GenomicRanges ggplot2 gplots Harman heatmaply igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview plotly RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva]; }; - deco = derive2 { name="deco"; version="1.4.1"; sha256="1lbrlacbdr16mw21jsvall18gfzq001p854nsa3jpgbhfs9y13zs"; depends=[ade4 AnnotationDbi Biobase BiocParallel BiocStyle cluster foreign gdata ggplot2 gplots gridExtra limma locfit made4 RColorBrewer reshape2 scatterplot3d sfsmisc SummarizedExperiment]; }; - decompTumor2Sig = derive2 { name="decompTumor2Sig"; version="2.4.1"; sha256="014z3p784v53bv3wpx1njcc0xzwg1hklaa44qjvg9x7j95vrpmq9"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gridExtra Matrix plyr quadprog S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; - decontam = derive2 { name="decontam"; version="1.8.0"; sha256="10y3iydzgwbr9ixyyylzxkd7jfg0qz14gmphmdhq94ys0frhwpxi"; depends=[ggplot2 reshape2]; }; - deepSNV = derive2 { name="deepSNV"; version="1.34.1"; sha256="1hagkdq06c3xsrba3c3bnqwwmk406f9plkdh66a4hypx6hbwp6k7"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; - deltaCaptureC = derive2 { name="deltaCaptureC"; version="1.2.0"; sha256="0jyv5py0mg82m9sqxzqb761pmc9r9jdx15zn6m26c1mqg367iw25"; depends=[DESeq2 GenomicRanges ggplot2 IRanges SummarizedExperiment]; }; - deltaGseg = derive2 { name="deltaGseg"; version="1.28.0"; sha256="076d0ncmm84nprnr98dmgd1zv71bxwp52yxfhci5bb5dyvymjzj9"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; - derfinder = derive2 { name="derfinder"; version="1.22.0"; sha256="1g5982r0gzmay05c49l2w6hicrqlzq6sv09bgri0kyn64amfpc1y"; depends=[AnnotationDbi BiocGenerics BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; - derfinderHelper = derive2 { name="derfinderHelper"; version="1.22.0"; sha256="1ca2cgcw0z3csbggpa638ncamyrh8y9kyqlpp3qzp3i0m36fkamk"; depends=[IRanges Matrix S4Vectors]; }; - derfinderPlot = derive2 { name="derfinderPlot"; version="1.22.0"; sha256="0fw1a2hb50xv1cr0ngp35akwfnc0yza2bbpplysbnks7z9d4g7gf"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; }; - destiny = derive2 { name="destiny"; version="3.2.0"; sha256="0ik5vwxz9cci3glwgb5ff03sfyr4sjcp8ckfymlgmlm6fz8cp21n"; depends=[Biobase BiocGenerics ggplot_multistats ggplot2 ggthemes irlba knn_covertree Matrix pcaMethods proxy Rcpp RcppEigen RcppHNSW RSpectra scales scatterplot3d SingleCellExperiment smoother SummarizedExperiment tidyr tidyselect VIM]; }; - dexus = derive2 { name="dexus"; version="1.28.0"; sha256="03vxq6ln1did9rmv6hcb845xfismrq6s2253nlana840cywdwh1m"; depends=[BiocGenerics]; }; - diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.70.0"; sha256="076zdxrdsajqssdk8kw0919fkx5simlz7dd71ryia4wgdw5mqcqx"; depends=[minpack_lm]; }; - diffHic = derive2 { name="diffHic"; version="1.20.0"; sha256="0zq1sciyap52s8p7xjyd7ba2q1bpfwfhfadf0pns2n6yfw26z3if"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment zlibbioc]; }; - diffcoexp = derive2 { name="diffcoexp"; version="1.8.0"; sha256="1gja7dy83p8w4k8jvrjpcyqdyf4ihl9dilm62gafn0n0r1rqbfd0"; depends=[BiocGenerics DiffCorr igraph psych SummarizedExperiment WGCNA]; }; - diffcyt = derive2 { name="diffcyt"; version="1.8.8"; sha256="1kq3zisgvi6kfra2sm17d01vw3rg0nz0vz5031jp2a96j7dryp98"; depends=[circlize ComplexHeatmap dplyr edgeR flowCore FlowSOM limma lme4 magrittr multcomp reshape2 S4Vectors SummarizedExperiment tidyr]; }; - diffloop = derive2 { name="diffloop"; version="1.16.0"; sha256="1q38qi6qx0qv3dr20nvyaxdxrs5422104l7chkzazp38whd5a87r"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; }; - diffuStats = derive2 { name="diffuStats"; version="1.8.0"; sha256="10ln1c1ic44inxmi19fvxi4scnwl9qi5hpswhsnqsngql3yg69wp"; depends=[expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; }; - diggit = derive2 { name="diggit"; version="1.20.0"; sha256="1k6i7w70yizc8drsdvz05sdfyrxr7z7fflbznc1wpnfv54phx00m"; depends=[Biobase ks viper]; }; - discordant = derive2 { name="discordant"; version="1.12.0"; sha256="161y6xmzrsj88swii85v43q48n10snawzfz6305m2hsdj6463qxq"; depends=[Biobase biwt gtools MASS]; }; - distinct = derive2 { name="distinct"; version="1.0.4"; sha256="1c0pp3sqm0l8gyfixv9774lvdzsdk9x7gz82hf8ldinvyn6frraf"; depends=[doParallel doRNG foreach ggplot2 limma Matrix Rcpp RcppArmadillo scater SingleCellExperiment SummarizedExperiment]; }; - dittoSeq = derive2 { name="dittoSeq"; version="1.0.2"; sha256="1fj7chyv077ffqnqvh2vv7x9x2alibk92fz3sihdfb167l0acdp4"; depends=[colorspace cowplot edgeR ggplot2 ggrepel ggridges gridExtra pheatmap reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; - divergence = derive2 { name="divergence"; version="1.4.0"; sha256="0m87v1z2mjmy9b74aknzbal22r2rj55prqclpq68shg6g2iw8q8c"; depends=[SummarizedExperiment]; }; - dks = derive2 { name="dks"; version="1.34.0"; sha256="1mrixifn868p0wjl6fcal1wm7ngf942lgas35wn0z1sqxnzqxl9n"; depends=[cubature]; }; - dmrseq = derive2 { name="dmrseq"; version="1.8.0"; sha256="15lc0lgyn5lqb7hwgyvngrb9s5isg651fvc87mi9bh6b2wyp5r84"; depends=[AnnotationHub annotatr BiocParallel bsseq bumphunter DelayedMatrixStats GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats nlme outliers RColorBrewer rtracklayer S4Vectors]; }; - doppelgangR = derive2 { name="doppelgangR"; version="1.16.0"; sha256="0is7j75n6p4gglnixgxzpjjybb7cdy0i405vhn0xwfshy9rs7i1s"; depends=[Biobase BiocParallel digest impute mnormt SummarizedExperiment sva]; }; - doseR = derive2 { name="doseR"; version="1.4.0"; sha256="1b6gqszng6fhb1ksqx9wckrlz2zc2iv33nd4g6l1lm8g4gfd9jyk"; depends=[digest edgeR lme4 matrixStats mclust RUnit S4Vectors SummarizedExperiment]; }; - dpeak = derive2 { name="dpeak"; version="1.0.0"; sha256="1kk3mjixk3gz3mzgg0l0gyw377j7jzqdb54fv26xkq9xzvhjpx3j"; depends=[BSgenome IRanges MASS Rcpp]; }; - drawProteins = derive2 { name="drawProteins"; version="1.8.0"; sha256="1dj28h6cjl3jsxxhjgrp0i9va2zy60sqk9smjm95npmv8ffy5nlq"; depends=[dplyr ggplot2 httr readr stringr tidyr]; }; - dualKS = derive2 { name="dualKS"; version="1.48.0"; sha256="097xnp1q0p4n64jwr76al7j50x57jw9wd7x9kww7g6w8n39r5b5r"; depends=[affy Biobase]; }; - dupRadar = derive2 { name="dupRadar"; version="1.18.0"; sha256="18b1syx9y2cd93zmzb6q5w19b5aw9zhka13rgd2q2pwwciql5m5a"; depends=[Rsubread]; }; - dyebias = derive2 { name="dyebias"; version="1.48.0"; sha256="14055dzs48kc33bdb0swn2nv3dyqg9nms4vx774420pm3bp2l013"; depends=[Biobase marray]; }; - easyRNASeq = derive2 { name="easyRNASeq"; version="2.24.1"; sha256="1zry5s3w3nznrks59sds45wjlrl660zi72167i9bvnqjz12c766a"; depends=[Biobase BiocFileCache BiocGenerics BiocParallel biomaRt Biostrings DESeq edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD rappdirs Rsamtools S4Vectors ShortRead SummarizedExperiment]; }; - easyreporting = derive2 { name="easyreporting"; version="1.0.0"; sha256="031na11smry5gd082r16lv5piyrl3p0l28j7n2xdbccbgimk72x7"; depends=[rmarkdown]; }; - ecolitk = derive2 { name="ecolitk"; version="1.60.0"; sha256="0p1jm07zh0295h1l83gdwqy72sxl5i9qhvdp5ci0kpv3al50j0cr"; depends=[Biobase]; }; - edge = derive2 { name="edge"; version="2.20.0"; sha256="0z3mbw116gidcpkifhf34vm0dsv164wm1h34qpvjl8b2pi0w9g1c"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; - edgeR = derive2 { name="edgeR"; version="3.30.3"; sha256="1z9bkg08rgqn3jm2s4ndbj641w33wl8jd3j6m5if6h2nnw6011ic"; depends=[limma locfit Rcpp]; }; - eegc = derive2 { name="eegc"; version="1.14.0"; sha256="1afvvh79c1z89arz59xqy8q0bw57rl147cdbsccpmfvyr4hk4zxk"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; - eiR = derive2 { name="eiR"; version="1.28.0"; sha256="0b56y3bn0qgafjam42ldh5pxz22ck50l5ibm3vxb9zz5vl2q76gf"; depends=[BiocGenerics ChemmineR DBI digest gespeR RcppAnnoy RCurl RUnit snow snowfall]; }; - eisa = derive2 { name="eisa"; version="1.40.0"; sha256="1d8577idjqjrfmchbfnj62q4shlrv339sc6qkxvi656c417h2m07"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; - eisaR = derive2 { name="eisaR"; version="1.0.0"; sha256="1c0vaicyf26vg115c45ax3db5cijpvcx94rfk16675rc4pir7c14"; depends=[AnnotationDbi BiocGenerics edgeR GenomicFeatures GenomicRanges IRanges limma rtracklayer S4Vectors SummarizedExperiment]; }; - enrichTF = derive2 { name="enrichTF"; version="1.4.0"; sha256="0gwgdsw5qa7lfpdha89ywjpajiz04aanvp31qb0zm8c2clq0zsl8"; depends=[BiocGenerics BSgenome clusterProfiler GenomeInfoDb GenomicRanges ggplot2 ggpubr heatmap3 IRanges JASPAR2018 magrittr motifmatchr pipeFrame R_utils rmarkdown rtracklayer S4Vectors TFBSTools]; }; - enrichplot = derive2 { name="enrichplot"; version="1.8.1"; sha256="01m3cp717ldfbz5w3yfywvjg6sfjzz7s3vlk7w268lmmcg6g6bz7"; depends=[AnnotationDbi cowplot DOSE europepmc ggplot2 ggplotify ggraph ggridges GOSemSim gridExtra igraph plyr purrr RColorBrewer reshape2 scatterpie]; }; - ensemblVEP = derive2 { name="ensemblVEP"; version="1.30.0"; sha256="1l4m5fzqjk2jka4iw242ad2nwjk20ppchg1f14r82954imv1ppzf"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; - ensembldb = derive2 { name="ensembldb"; version="2.12.1"; sha256="1vvchc04nshxc768fp31rxb603aj3hmq8xlh5qabcwf2c3z9719g"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; }; - epiNEM = derive2 { name="epiNEM"; version="1.12.0"; sha256="0gr616vbnbidd02znppgpybwg727xack9pi5hwcl68wszvg93y4q"; depends=[BoolNet e1071 graph gtools igraph lattice latticeExtra minet mnem pcalg RColorBrewer]; }; - epigenomix = derive2 { name="epigenomix"; version="1.28.0"; sha256="0xf7gl4djbjhj051zfcszflr8h2zp9z2q10b5aqd93qi8yf3lasz"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; - epihet = derive2 { name="epihet"; version="1.4.0"; sha256="1nsc1fz6jb4a9k3m02x4ggj5zy29vzadnvjwsfikidvrrr497j1b"; depends=[data_table doParallel EntropyExplorer foreach GenomicRanges ggplot2 igraph IRanges pheatmap qvalue ReactomePA Rtsne S4Vectors WGCNA]; }; - epivizr = derive2 { name="epivizr"; version="2.18.0"; sha256="0php3zsga2lqanb533svkxcjjqzqmgahj93mk4p0zg60arlxy8j7"; depends=[bumphunter epivizrData epivizrServer GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - epivizrChart = derive2 { name="epivizrChart"; version="1.10.0"; sha256="0q2vbzg9nw4m1kzglm9cn74mjd66lgwmf7lx0vqvxp2c61nkyrhw"; depends=[BiocGenerics epivizrData epivizrServer htmltools rjson]; }; - epivizrData = derive2 { name="epivizrData"; version="1.16.0"; sha256="0840mij1f5g9q0kqj5k5pd4r7nw5cf11pj88qxabvp53bv8cdp7v"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; - epivizrServer = derive2 { name="epivizrServer"; version="1.16.0"; sha256="1fqiqxb5s49fi3vdxhhd35zjnwyn3x0h0x7zyisfwd2hgdq8smk8"; depends=[httpuv mime R6 rjson]; }; - epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.16.0"; sha256="0dmyq0p7d8y00qj66qqgvgs0j6yrzyknnf9y7xg297qlv9lc7pxa"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; - erccdashboard = derive2 { name="erccdashboard"; version="1.22.0"; sha256="1i40s23dsml1pdnaj7b8rfg3cy6flgj3n682xfdrcy8xq91cq31f"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; }; - erma = derive2 { name="erma"; version="1.4.0"; sha256="1ccfbq0r48sr3h8050w8zv8402h7nx09adr0xdyqlg7kwp9vd2l3"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel GenomeInfoDb GenomicFiles GenomicRanges ggplot2 Homo_sapiens IRanges rtracklayer S4Vectors shiny SummarizedExperiment]; }; - esATAC = derive2 { name="esATAC"; version="1.10.0"; sha256="1jq6szin1g9brhhhf89g3ag5vwk4cy9621xfg1z9hp2r57arqyrs"; depends=[AnnotationDbi BiocGenerics BiocManager Biostrings BSgenome ChIPseeker clusterProfiler corrplot digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2018 knitr magrittr motifmatchr pipeFrame R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; }; - esetVis = derive2 { name="esetVis"; version="1.14.0"; sha256="034ggs4clj3fn2xnba9myslbnfwqjq01qlrcbmvpqdsf8a5mp5bg"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; - eudysbiome = derive2 { name="eudysbiome"; version="1.18.0"; sha256="0l523svbx0f5bl46sqwfpwpvy91bvbs8mdazk9zncs4s5prlkydp"; depends=[Biostrings plyr R_utils Rsamtools]; }; - evaluomeR = derive2 { name="evaluomeR"; version="1.4.0"; sha256="0rya24snqxsgb1b1x6ncrkpsviw70lawrpc5jlabl01ykjw0xhda"; depends=[cluster corrplot fpc ggdendro ggplot2 matrixStats MultiAssayExperiment plotrix Rdpack reshape2 SummarizedExperiment]; }; - exomeCopy = derive2 { name="exomeCopy"; version="1.34.0"; sha256="0kshrd345abglqc751s462mrhdzfmkyj0f8abcc9akl0f5489pp8"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; - exomePeak2 = derive2 { name="exomePeak2"; version="1.0.0"; sha256="048vf45gmcb1qb7p2h28ysd6g7b6xvsl1ana77bfgcljvhg3fnkx"; depends=[apeglm Biobase BiocParallel Biostrings BSgenome cqn DESeq2 genefilter GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges mclust reshape2 RMariaDB Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - explorase = derive2 { name="explorase"; version="1.52.0"; sha256="0nqn6b9xwpnlbbwdpd30y9arj496jxk89irds00lvp6zddl10fpb"; depends=[limma RGtk2]; }; - fCCAC = derive2 { name="fCCAC"; version="1.14.0"; sha256="0g4abfmpl2vph3x08yqdnzphfhqxz3vl6fw6pxd4sc7rr0g4ni93"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; }; - fCI = derive2 { name="fCI"; version="1.18.0"; sha256="08l1x78fhr7sjgwl3i35zih2x15l7r07fxpclws1zdgglqp2vrkb"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; - fabia = derive2 { name="fabia"; version="2.34.0"; sha256="0qzz1w6jnrl8ynal0a4jc55j10zpjy9xzny5asw04nmjra3k1ih3"; depends=[Biobase]; }; - factDesign = derive2 { name="factDesign"; version="1.64.0"; sha256="05xd0pqhrkpnjhxif2dhff8hliq59p10x5fdrfyavh49xc0cym76"; depends=[Biobase]; }; - farms = derive2 { name="farms"; version="1.40.0"; sha256="1g55ph7yf7dng8s2pmza78jdv2257i48jzbw1fvshj76zgfdp4lk"; depends=[affy Biobase MASS]; }; - fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.24.0"; sha256="0k0hjpg9fddxxi8w242yb8hp34xvs9f36l7jw5l38zrrq7h2yr9l"; depends=[doParallel Hmisc impute LiquidAssociation preprocessCore WGCNA]; }; - fastseg = derive2 { name="fastseg"; version="1.34.0"; sha256="1d48n245pzmvcpsz93lxb4frqh222gfhpmlvm0sb74skn16way63"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; }; - fcScan = derive2 { name="fcScan"; version="1.2.0"; sha256="1fpa0zgwxvyfcmd8j990m26dwbm3a2sk5ahfbbbnjfwhdlgc1mjb"; depends=[GenomicRanges IRanges plyr rtracklayer SummarizedExperiment VariantAnnotation]; }; - fcoex = derive2 { name="fcoex"; version="1.2.0"; sha256="0fh5qdgqwmzhrxhyn634r2nddkmvychivdp6jc5mgz34vjaqpj1f"; depends=[clusterProfiler data_table dplyr FCBF ggplot2 ggrepel igraph intergraph network pathwayPCA progress scales SingleCellExperiment sna stringr]; }; - fdrame = derive2 { name="fdrame"; version="1.60.0"; sha256="1qhz55smi09d25wz7sxfrsfs35j3skrkj4scdqx5s32cqfymrzwh"; depends=[]; }; - ffpe = derive2 { name="ffpe"; version="1.32.0"; sha256="1fad647hwzm7x7vwx9w222jpxrwb4kp404wfsm5lwsj58vz9i8w5"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; }; - fgsea = derive2 { name="fgsea"; version="1.14.0"; sha256="0zbjj8al1ps7immxixsn5g8lvbmpmxvqwqbpdgsicxp00gb9bybc"; depends=[BH BiocParallel data_table fastmatch ggplot2 gridExtra Matrix Rcpp]; }; - fishpond = derive2 { name="fishpond"; version="1.4.1"; sha256="0xg9x7cib1lz4fsv1n07pli80limrs2nxpalz83iwx9l7v329l8r"; depends=[abind gtools Matrix matrixStats qvalue Rcpp S4Vectors SummarizedExperiment svMisc]; }; - flagme = derive2 { name="flagme"; version="1.44.0"; sha256="12w66wa4rbj0dbbg7zma8j432gwpfznrri7573i8jc3h9vwwazhm"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; - flowAI = derive2 { name="flowAI"; version="1.18.5"; sha256="091blmr0gq41wz1qvrb3w8b6a42sl8r93d6csk7nxb968bjl4ggf"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 rmarkdown scales]; }; - flowBeads = derive2 { name="flowBeads"; version="1.26.0"; sha256="1i7kivv4zjrwn98v85zqqzyk2z6l2sqsnqq2v88qm2icsqvnjvlg"; depends=[Biobase flowCore knitr rrcov xtable]; }; - flowBin = derive2 { name="flowBin"; version="1.24.0"; sha256="1hl2yysd8zlhbfd6az043ig9x6xajgpn5iw8yfbbgg60fds6bif8"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; - flowCHIC = derive2 { name="flowCHIC"; version="1.22.0"; sha256="038nsf1ml8k9yrca4hqhc7sa4i3wy2fspvwjpq3inkms4rfg4g2p"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; - flowCL = derive2 { name="flowCL"; version="1.26.0"; sha256="1npga2w533n1406fw8ngi2ba6nqmqlqzmd8vr2bvspzswhvxqmrv"; depends=[graph Rgraphviz SPARQL]; }; - flowClean = derive2 { name="flowClean"; version="1.26.0"; sha256="0ib8j882mfpc3whk5m57qj40kfz514marcd3yasclbmsqic66rsp"; depends=[bit changepoint flowCore sfsmisc]; }; - flowClust = derive2 { name="flowClust"; version="3.26.0"; sha256="06mkq9y41jax07x4knhvhzgrkgqdvpvcw604bxdk6bv9wx3ipq5b"; depends=[Biobase BiocGenerics clue corpcor ellipse flowCore flowViz graph mnormt]; }; - flowCore = derive2 { name="flowCore"; version="2.0.1"; sha256="1xalndmfidfzqwlppdanx7cnm4ysznq21ingmykhxni86s42kd8p"; depends=[BH Biobase BiocGenerics cytolib matrixStats Rcpp RcppArmadillo RProtoBufLib]; }; - flowCyBar = derive2 { name="flowCyBar"; version="1.24.0"; sha256="0spai1ibfbj27ky6fw62mnc09pydfldakg3svhlxny6m0y15ryza"; depends=[gplots vegan]; }; - flowDensity = derive2 { name="flowDensity"; version="1.22.0"; sha256="07p2v0c42bihqw9103m09hgff7b8m5mh67sgv63w88zgkm5ps8v3"; depends=[car flowCore flowViz flowWorkspace gplots RFOC rgeos sp]; }; - flowFP = derive2 { name="flowFP"; version="1.46.0"; sha256="1gmlfv8qd0ydj5mqa99ic4qvb996hdbydnrbma2yz76jsn2r7il8"; depends=[Biobase BiocGenerics flowCore flowViz]; }; - flowFit = derive2 { name="flowFit"; version="1.25.0"; sha256="0hrjf0df5hj57x89vgh6qidkjlxla783i8a9q35mf0nhz9c2gxrx"; depends=[flowCore flowViz gplots kza minpack_lm]; }; - flowMap = derive2 { name="flowMap"; version="1.26.0"; sha256="1lynla1avly5givr3aila2vm34hqm3580ad8qlyim61ib3kgfakq"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; - flowMatch = derive2 { name="flowMatch"; version="1.24.0"; sha256="16jzaqmb5igx2qpfqk26iryc5f1kj04klm7wgqvnl4m26iskgv16"; depends=[Biobase flowCore Rcpp]; }; - flowMeans = derive2 { name="flowMeans"; version="1.48.0"; sha256="1sv5vpwm3qdhkn1gdrk3n674harjcni91g63sqzfmybiwq8dlym7"; depends=[Biobase feature flowCore rrcov]; }; - flowMerge = derive2 { name="flowMerge"; version="2.36.0"; sha256="0142zkczz0z1668ds6m73ny3v139b5gc9p5j4v86njhb4absbagh"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; - flowPeaks = derive2 { name="flowPeaks"; version="1.34.0"; sha256="1cxzvgb6q9ydqail6hbsfzgi4dfnacsnzfqr4mygg8ffl31nmmmb"; depends=[]; }; - flowPloidy = derive2 { name="flowPloidy"; version="1.14.0"; sha256="0v2i70haiw805xcy7cjg3nnk1sjchbj9d95hlpvhc94dn890mpny"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; }; - flowPlots = derive2 { name="flowPlots"; version="1.36.0"; sha256="0w0sgcgpbw4zsrfphrbrv89v13jzp0kx8qj8wxf7sca5v8221z10"; depends=[]; }; - flowSpecs = derive2 { name="flowSpecs"; version="1.2.0"; sha256="1ndq9n1l88d6hhygv53jbwcj5yjmj65rpz6m2afjjg5r0cykk9za"; depends=[BiocGenerics BiocParallel flowCore ggplot2 reshape2 zoo]; }; - flowSpy = derive2 { name="flowSpy"; version="1.2.3"; sha256="0yq8mdzpm79qsfs6d3shl1drbl7y6fya59bv656r4kfgjvk03fb3"; depends=[Biobase BiocNeighbors cluster destiny flowCore FlowSOM flowUtils ggplot2 gmodels igraph limma Matrix matrixStats mclust pheatmap prettydoc RANN Rcpp Rtsne scatterpie scatterplot3d stringr sva umap]; }; - flowStats = derive2 { name="flowStats"; version="4.0.0"; sha256="1ygvxvd7y6jp907y0h3hycdwvw1fch16w84g06nk4f4g4kvrzdir"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow RColorBrewer rrcov]; }; - flowTime = derive2 { name="flowTime"; version="1.12.0"; sha256="19rvq10rbj28z9yanj8svkhs6acng4gka3fabb67didiwsz30cjy"; depends=[flowCore plyr]; }; - flowTrans = derive2 { name="flowTrans"; version="1.40.0"; sha256="1yp0lrrcvydsjh69mr88cbqhj6r0blln92gjvsays92jhrc44lrk"; depends=[flowClust flowCore flowViz]; }; - flowType = derive2 { name="flowType"; version="2.25.0"; sha256="1q1hdwrpsi3zsbd630q4r2b5fg0ia8xa68kf6fz8c597ssccx0a0"; depends=[BH Biobase flowClust flowCore flowMeans flowMerge Rcpp rrcov sfsmisc]; }; - flowUtils = derive2 { name="flowUtils"; version="1.52.0"; sha256="03jj4zyffm9kwzrg4vbsk6clc2v2m95wgalgqwzi31n9a2zyaza4"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; - flowVS = derive2 { name="flowVS"; version="1.19.0"; sha256="15f343mhsc726da2q5d575lwrz56sm9z354pr0y3mlbawmg99078"; depends=[flowCore flowStats flowViz]; }; - flowViz = derive2 { name="flowViz"; version="1.52.0"; sha256="0f3jfwdmaq9wrgl737blk5gmpc29l9kb6nadqhxpvbjwqsnzx0yq"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; - flowWorkspace = derive2 { name="flowWorkspace"; version="4.0.6"; sha256="123ny8n3jjgmsnpghk1dafxkwmcyr513gxi8y4h4qszq4s6ai15v"; depends=[BH Biobase BiocGenerics cytolib data_table digest dplyr flowCore ggplot2 graph lattice latticeExtra matrixStats ncdfFlow RBGL Rcpp RcppArmadillo RcppParallel Rgraphviz Rhdf5lib RProtoBufLib scales stringr XML]; }; - flowcatchR = derive2 { name="flowcatchR"; version="1.22.0"; sha256="07bi2shv5rpfdhnxhy6xqh8b6vnwkkr051z5infclf7z2mh7f9n9"; depends=[abind BiocParallel colorRamps EBImage plotly shiny]; }; - fmcsR = derive2 { name="fmcsR"; version="1.30.0"; sha256="1j9rx473v3zj29n5b7s9k2vj49c0pflpjcr1vbqxf64wkhpv4g6k"; depends=[BiocGenerics ChemmineR RUnit]; }; - focalCall = derive2 { name="focalCall"; version="1.21.0"; sha256="1n83rn5j0vh8fipyh9w89mm2qdxzp61hv7vcajl507yxzj5qm1ga"; depends=[CGHcall]; }; - frenchFISH = derive2 { name="frenchFISH"; version="1.0.0"; sha256="03glm61wlfd74pjh0j0lw8clkpk712a71in8hwc52fkzp3mzfg5r"; depends=[MCMCpack NHPoisson]; }; - frma = derive2 { name="frma"; version="1.40.0"; sha256="1ghyjrqafscjvbqvrmh063r0sdh2qscdmirz8ll8h56nqadk0iyy"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; - frmaTools = derive2 { name="frmaTools"; version="1.40.0"; sha256="1nzpms16rys8vr4l7wrs4qncy9n629v15ni56wkw0hwfgp8xxpzi"; depends=[affy Biobase DBI preprocessCore]; }; - funtooNorm = derive2 { name="funtooNorm"; version="1.12.0"; sha256="026c038zilkli8s45szyjywrz0p1yn7k9lpfw173r8l1n5sqk86c"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; }; - gCMAP = derive2 { name="gCMAP"; version="1.32.0"; sha256="04aaqa9gvv97ijgnr05drwcn637w1n1k1v9gna0zzxrbcwln36n8"; depends=[annotate AnnotationDbi bigmemory bigmemoryExtras Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; }; - gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.27.0"; sha256="1361qlzq5lgj24ssb7l1pds5h0g1wzn7q2ff9f03kpl5nhlbzrwd"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; }; - gCrisprTools = derive2 { name="gCrisprTools"; version="1.16.0"; sha256="0n5zxyrfnr981r1ynlclcxh6axxmbpd3m169zf767zicmjsxxcl7"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg SummarizedExperiment]; }; - gQTLBase = derive2 { name="gQTLBase"; version="1.20.4"; sha256="1ly14vhhqxjpbxjypi6ppd37dycabdhf4ny4nsvp9969k418zv41"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; - gQTLstats = derive2 { name="gQTLstats"; version="1.20.0"; sha256="1jjqfpjp93nmxjn757j5mzcax96bzcqdd1gr3rsdxg7ap008l2w7"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr erma ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggbeeswarm ggplot2 gQTLBase HardyWeinberg Homo_sapiens IRanges limma mgcv plotly reshape2 S4Vectors shiny snpStats SummarizedExperiment VariantAnnotation]; }; - gaga = derive2 { name="gaga"; version="2.34.0"; sha256="10livlmxsdzf82rybhpqz81zdc0ndchy9z3kz62c651hc4x4pki1"; depends=[Biobase coda EBarrays mgcv]; }; - gage = derive2 { name="gage"; version="2.38.3"; sha256="1bqmvjiya1df0b3h491lp1jxahiyidvaf9n094z0sk84x5y3xh2p"; depends=[AnnotationDbi GO_db graph KEGGREST]; }; - gaggle = derive2 { name="gaggle"; version="1.56.0"; sha256="0rsps8janjmldh6m4bigf05w36gckmr8bpkf59g6abalapl8mpcq"; depends=[graph rJava RUnit]; }; - gaia = derive2 { name="gaia"; version="2.32.0"; sha256="044ykv4annh4ksv6cl58lmia4pgdcn7c9hb8v9lcnlygiwm8qpas"; depends=[]; }; - garfield = derive2 { name="garfield"; version="1.16.0"; sha256="1kfcvlqwi0vp4q1b9x7x5vi1f30s3nzf7qrm5p8i2dk6karl9ncr"; depends=[]; }; - gcapc = derive2 { name="gcapc"; version="1.12.0"; sha256="0yqqfs0xwiimhk4ki4kz28q6vh65l0izg6lik41f387firhf3pil"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; }; - gcatest = derive2 { name="gcatest"; version="1.18.0"; sha256="1pzrpwx26dnz6q37d6kih6whbqrkal30skdsqr5v43ggqmcakbwa"; depends=[lfa]; }; - gcrma = derive2 { name="gcrma"; version="2.60.0"; sha256="1klbnygc1i5ac1x00bsk0rjw5h5dn6pn65fa3y9r09q47gpy1c5g"; depends=[affy affyio Biobase BiocManager Biostrings XVector]; }; - gdsfmt = derive2 { name="gdsfmt"; version="1.24.1"; sha256="0ipf60wylbhvwk9q3mbnak0f1n6k7spfh90s1c1c0b47ryxsri67"; depends=[]; }; - geNetClassifier = derive2 { name="geNetClassifier"; version="1.28.0"; sha256="163fbly8yglkmwqzwksj5ss4b50sma82khc2q74qgxrd8ji9155i"; depends=[Biobase e1071 EBarrays minet]; }; - geecc = derive2 { name="geecc"; version="1.21.0"; sha256="018yfiik3x0nchhgr5lb58ycngapx300p4r0aplzv2fz43avf4yi"; depends=[gplots MASS Rcpp]; }; - gemini = derive2 { name="gemini"; version="1.2.0"; sha256="1n5h9rvwpnvibbrdy71n4irc8j41b6hizqqff8ffh4pjy5n6g1hs"; depends=[dplyr ggplot2 magrittr mixtools pbmcapply scales]; }; - genArise = derive2 { name="genArise"; version="1.64.0"; sha256="03kih2334l3np25k09mnhyvjzs0l6a7nbnbgc3wwkrrds8fbncnc"; depends=[locfit tkrplot xtable]; }; - genbankr = derive2 { name="genbankr"; version="1.16.0"; sha256="0vd115ccllmzi5wr69aw46c2ny79qj76ds8qdm9bj4mrx1ayj611"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; - geneAttribution = derive2 { name="geneAttribution"; version="1.14.0"; sha256="00wz983nahkjl176g76cplwfyq8g6ww9pk70p9x89ka60wfjwhz1"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; }; - geneClassifiers = derive2 { name="geneClassifiers"; version="1.12.0"; sha256="1wmr0qlvsgwiy2mxqp3j9pd8dzqy0wj4gds3zw219isnb4wk6b4x"; depends=[Biobase BiocGenerics]; }; - geneRecommender = derive2 { name="geneRecommender"; version="1.60.0"; sha256="19dcsgrw9v6nvzdbm2kaf8027ahk8gavh8bsl9p8ddkw3h6hibr5"; depends=[Biobase]; }; - geneRxCluster = derive2 { name="geneRxCluster"; version="1.24.0"; sha256="0ngsxafjh6hk5k3a7cfjvv15w1nk1zws0z15ixdyd18q8fabnc30"; depends=[GenomicRanges IRanges]; }; - geneXtendeR = derive2 { name="geneXtendeR"; version="1.14.0"; sha256="18fqlql5jr34nwg2x11w9k44walbqbwrg8p85s8lb3xrigy88v2h"; depends=[AnnotationDbi BiocStyle data_table dplyr GO_db networkD3 org_Rn_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; }; - genefilter = derive2 { name="genefilter"; version="1.70.0"; sha256="1sbbrnq6p90fri0ik6aq2zw26kasw63nyiy7xkzrj6vgyq7x258g"; depends=[annotate AnnotationDbi Biobase BiocGenerics survival]; }; - genefu = derive2 { name="genefu"; version="2.20.0"; sha256="1xgzf659yfgb1cm69bgn1pm9dz02g2gc8c8pqw19dx9l0r9andk1"; depends=[AIMS amap biomaRt iC10 impute limma mclust survcomp]; }; - geneplast = derive2 { name="geneplast"; version="1.14.0"; sha256="1f4d72yyb35bjq6sycyaqg3d5lr73036jznajviqcss1xd400sbq"; depends=[ape data_table igraph snow]; }; - geneplotter = derive2 { name="geneplotter"; version="1.66.0"; sha256="1y494da1llmrvn3qm7akwgwjazvpffabi8llw3fbday14cay1br5"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; - genoCN = derive2 { name="genoCN"; version="1.40.0"; sha256="0p08bghddp96yp8p4rw2wq9zc19g0h15r7yhn21a0ks8fvsgh6f4"; depends=[]; }; - genomation = derive2 { name="genomation"; version="1.20.0"; sha256="1cy8kqwddiha5jy6nda1al956i4wncbgjkrxwijdb08cmka2sfwh"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer RUnit S4Vectors seqPattern]; }; - genomeIntervals = derive2 { name="genomeIntervals"; version="1.44.2"; sha256="0zgca09cszssx9jfbnjhs40n5phw79ifkp988cl9w2vkq3f5x9yy"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; - genomes = derive2 { name="genomes"; version="3.18.0"; sha256="1l6pqa9c7sngk01kc2j8mqdj9sq42y07zmxc4pm3q7lz94zhx1rc"; depends=[curl readr]; }; - genoset = derive2 { name="genoset"; version="1.44.0"; sha256="02yqbxzwxcb69fjqqdjlp3ll7544bbwz0lnxhdmck6z8s8sa05a6"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - genotypeeval = derive2 { name="genotypeeval"; version="1.20.0"; sha256="0i3jih541qv55kzm6cqv27h0i5ln12qnn58ima3kjfblbf2b4kdx"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; - genphen = derive2 { name="genphen"; version="1.16.0"; sha256="1snjb8i6xg6s8f3f99kpqks7cakzf847rlllp5dqgjkp828zi0z1"; depends=[Biostrings doParallel e1071 foreach ranger Rcpp rPref rstan]; }; - gep2pep = derive2 { name="gep2pep"; version="1.8.0"; sha256="1xbfhvmzqpb7mp4k21bbskrdwsqq5y2qv9knmsf00vqcld0bf5n3"; depends=[Biobase digest foreach GSEABase iterators repo rhdf5 XML]; }; - gespeR = derive2 { name="gespeR"; version="1.20.0"; sha256="1lgg0l3ljbmqsw97apbj1chs154iwhrpdj6wzcfhr8z7w1as7br4"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; - ggbio = derive2 { name="ggbio"; version="1.36.0"; sha256="11ggnqjq42fi2hm9xlvrrlr2xhy4kglvl1a0mycp1s4v67lxw5h5"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 rlang Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - ggcyto = derive2 { name="ggcyto"; version="1.16.0"; sha256="1ih6ggay7jjxnx8blc2sk95g8d40gkim145jllkk8sqwl02g44p0"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra hexbin ncdfFlow plyr RColorBrewer rlang scales]; }; - ggtree = derive2 { name="ggtree"; version="2.2.4"; sha256="1d1h269sxy94kmfahj8bdp5kzik811mrvl0h1fdkd5j6kbcc81s0"; depends=[ape aplot dplyr ggplot2 magrittr purrr rlang rvcheck tidyr tidytree treeio]; }; - girafe = derive2 { name="girafe"; version="1.40.0"; sha256="05wqxi2qfsfv0bdiq0p6nrk61q15mmi15kliyiww8vz7051mb1xj"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; - glmGamPoi = derive2 { name="glmGamPoi"; version="1.0.0"; sha256="08wki550jhr1d3xmkk3h01l7k41jmbyyjjfc9p22d861f81fzcvs"; depends=[beachmat DelayedArray DelayedMatrixStats HDF5Array pracma Rcpp RcppArmadillo SummarizedExperiment]; }; - glmSparseNet = derive2 { name="glmSparseNet"; version="1.6.0"; sha256="0v50y8kh5accs9iq1a7px6f50cmjh5h8zmpa14bvad05pvwj88vi"; depends=[biomaRt dplyr forcats futile_logger ggplot2 glmnet loose_rock Matrix MultiAssayExperiment readr reshape2 rlang sparsebn sparsebnUtils STRINGdb stringr SummarizedExperiment survminer]; }; - globalSeq = derive2 { name="globalSeq"; version="1.16.1"; sha256="0zlb0h3djabwrm5sszx76r55r9svavpahhnlgzf1qi2iz6a9mjc5"; depends=[]; }; - globaltest = derive2 { name="globaltest"; version="5.42.0"; sha256="0ndkpwi8dmz5kv2yzmdfx0qq00x6jismiah0xd6kh44l42k88510"; depends=[annotate AnnotationDbi Biobase survival]; }; - gmapR = derive2 { name="gmapR"; version="1.30.0"; sha256="14dda16jgpc29nm4llswz6yr47hwmndd9zg2qlz2psfbn31z5k6w"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - gmoviz = derive2 { name="gmoviz"; version="1.0.1"; sha256="0rrqzqr64724ip19ql34yds3vd7r9s8bhw4bicq80pffz0c0idyx"; depends=[BiocGenerics Biostrings circlize colorspace ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridBase IRanges pracma Rsamtools rtracklayer S4Vectors]; }; - goProfiles = derive2 { name="goProfiles"; version="1.50.0"; sha256="0kdmr4mdjjb79srljbd0lr7np14gz58fya2v21qgny4m5lpw902d"; depends=[AnnotationDbi Biobase CompQuadForm GO_db stringr]; }; - goSTAG = derive2 { name="goSTAG"; version="1.12.1"; sha256="1p4rhmfc09vzywrdkzak6784y92bdfkr6jw3l4xfq6sw77wd3wml"; depends=[AnnotationDbi biomaRt GO_db memoise]; }; - goTools = derive2 { name="goTools"; version="1.62.0"; sha256="185ydv7hajhxw0jgv5gplcx59grbv7aqypfrxx6ny422d5mb86rm"; depends=[AnnotationDbi GO_db]; }; - goseq = derive2 { name="goseq"; version="1.40.0"; sha256="1iyri4rrchzsn8p6wjxr4k30d3cqx3km5mnd9hkfm5d0s7fjzlym"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; - gpart = derive2 { name="gpart"; version="1.6.0"; sha256="1id0nyk21g4y6p0p9xiz4pw1nivb6zl2zm2mxcmdybpj0dn65cgp"; depends=[AnnotationDbi biomaRt data_table GenomicRanges Homo_sapiens igraph IRanges OrganismDbi Rcpp TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - gpls = derive2 { name="gpls"; version="1.60.0"; sha256="0w8gn4da618y4v8si9fbmzdzxnrb39f9zx6z7a9w6jal45cl283k"; depends=[]; }; - gprege = derive2 { name="gprege"; version="1.32.0"; sha256="14c1cmm4w3vawlyrw6ghn6shv4ncn08wgvgiz8cvwaf52cdf9dy8"; depends=[gptk]; }; - gpuMagic = derive2 { name="gpuMagic"; version="1.4.0"; sha256="0bagp0jscqrddbavgszmjlb8aiplarjh9p1y54pr1mjcnmqrg63d"; depends=[BiocGenerics Deriv DescTools digest pryr Rcpp stringr]; }; - gramm4R = derive2 { name="gramm4R"; version="1.2.0"; sha256="0n7a9w19p9mjn4zhhwm3jzf0nwbjsigzd9wny8gnisippwsz8g0w"; depends=[basicTrendline DelayedArray DMwR investr minerva phyloseq psych SummarizedExperiment]; }; - graper = derive2 { name="graper"; version="1.4.0"; sha256="0z90jrjnhmv2l1nfh35mxym5dxqcdp5g34388yx712zckximjy6k"; depends=[BH cowplot ggplot2 Matrix matrixStats Rcpp RcppArmadillo]; }; - graph = derive2 { name="graph"; version="1.66.0"; sha256="15v0nx9gzpszmdn5lil1s1y8qfmsirlznh56wcyqq4sxwjbyjn9g"; depends=[BiocGenerics]; }; - graphite = derive2 { name="graphite"; version="1.34.0"; sha256="0rc9cw3picz1y0lwhbzpk03ciij8kij74m15qgzh2ykla7zprb2p"; depends=[AnnotationDbi checkmate graph httr rappdirs]; }; - groHMM = derive2 { name="groHMM"; version="1.22.0"; sha256="04z9qq1xwdsaxbqhyld37w0ybvzly9pc1hcyrnwdbyjwd7n1fncb"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; - gscreend = derive2 { name="gscreend"; version="1.2.0"; sha256="1xx808k350r4hp02rngk5s8kp23by4dzhcpmc8r1y8vsf3xnyp1a"; depends=[BiocParallel fGarch nloptr SummarizedExperiment]; }; - gsean = derive2 { name="gsean"; version="1.8.0"; sha256="103cq1bc4iws6zhkz5vzx4qssrh138pgv03zswy0gbb08zgkbqka"; depends=[fgsea PPInfer]; }; - gtrellis = derive2 { name="gtrellis"; version="1.20.1"; sha256="1v2l7r945xx4cf9s8m19csj7716n2ayxy05adkl8zqgxk0gxzqm1"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; - gwascat = derive2 { name="gwascat"; version="2.20.1"; sha256="1cq5cmdrf0a0arr841yvkh6d8drc15p7mif1afr215l1s3y2dwd4"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors]; }; - gwasurvivr = derive2 { name="gwasurvivr"; version="1.6.0"; sha256="1jdfsyi71p5swcw7k7i478aask7r4yp71s7bjcdn779ji09vgizk"; depends=[GWASTools matrixStats SNPRelate SummarizedExperiment survival VariantAnnotation]; }; - h5vc = derive2 { name="h5vc"; version="2.22.0"; sha256="1f00kscfb3vkb68x5snlds7s3j2im7951vmfshxhdl3mnmasby4i"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rhtslib Rsamtools S4Vectors]; }; - hapFabia = derive2 { name="hapFabia"; version="1.30.0"; sha256="16bxlfhfv0d739g3x3zdw2j69zz5gxx50ajnnd1qja23k1ks0bxr"; depends=[Biobase fabia]; }; - heatmaps = derive2 { name="heatmaps"; version="1.12.0"; sha256="1d83yilb8v9na6a55bazn82nlrg23595b3ipgsqpqwa271f8404p"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; }; - hiAnnotator = derive2 { name="hiAnnotator"; version="1.22.0"; sha256="0qmmyxkk0qhqzaq6zrdlagbjg4l5lra0gra94hm9mcx1520mcc8d"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; - hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.24.0"; sha256="1r3sspacpx20nhqnbk8c5n40fpi5mprzrbcrfckpgdak7y7dnw8y"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl sonicLength]; }; - hicrep = derive2 { name="hicrep"; version="1.11.0"; sha256="1zwsnnk8xwz6wz9qkllzxw10bpv435gv4xcqzdbq6871za665sdz"; depends=[]; }; - hierGWAS = derive2 { name="hierGWAS"; version="1.18.0"; sha256="1hxwc9ix97ckx6cb80zxgr3v2aq1qmpvgp17gd3cq4q912wvxjyi"; depends=[fastcluster fmsb glmnet]; }; - hierinf = derive2 { name="hierinf"; version="1.6.0"; sha256="00r8wpqqj2n0dc87pvprfp4jd31mm978jfqsb5kxn2gb6ab8i9dg"; depends=[fmsb glmnet]; }; - hipathia = derive2 { name="hipathia"; version="2.4.0"; sha256="09snfzlmpn62g2xd183cx116w6lsp0in5yhjn84phz477zv81iyp"; depends=[AnnotationHub coin DelayedArray igraph limma matrixStats MultiAssayExperiment preprocessCore S4Vectors servr SummarizedExperiment]; }; - hmdbQuery = derive2 { name="hmdbQuery"; version="1.8.0"; sha256="1y6j0x532rk639kq2nk2443diccn0nb2s4m6byax67z4zqv0504g"; depends=[S4Vectors XML]; }; - hopach = derive2 { name="hopach"; version="2.48.0"; sha256="0zrpszqaz8q5wwg43v16va6x8l38rzkps9jc863sjrjccgycrzkh"; depends=[Biobase BiocGenerics cluster]; }; - hpar = derive2 { name="hpar"; version="1.30.0"; sha256="1jq0qw7wq3426cp004divywjm3ryixkykcmwlhrri13agz6rx3r9"; depends=[]; }; - hypeR = derive2 { name="hypeR"; version="1.4.0"; sha256="1fcbgima1ab3rd828b37bkj37vqgshw5xdj31q9jl2qci8s1mlns"; depends=[dplyr ggforce ggplot2 httr igraph kableExtra magrittr msigdbr openxlsx purrr R6 reactable rlang rmarkdown scales stringr visNetwork]; }; - hyperdraw = derive2 { name="hyperdraw"; version="1.40.0"; sha256="1qzx5sqp7rpspk8g1j34p03ds1vmw0h7hpzb2ijpbvmsja5drzvf"; depends=[graph hypergraph Rgraphviz]; }; - hypergraph = derive2 { name="hypergraph"; version="1.60.0"; sha256="1iq9b9rzy3ikx8xszsjiv3p8l702n2h2s9w33797wcmkg4apslb7"; depends=[graph]; }; - iASeq = derive2 { name="iASeq"; version="1.32.0"; sha256="0zciwpkd19z1jd7qlzmindgh25d3jzabd63b980v54kwyx1c6cmi"; depends=[]; }; - iBBiG = derive2 { name="iBBiG"; version="1.32.0"; sha256="0bbawqlarkv4zs31pji4c74m1d7qr5bdsxblzipbl9gxfrn1qyhg"; depends=[ade4 biclust xtable]; }; - iBMQ = derive2 { name="iBMQ"; version="1.28.0"; sha256="12s5kiymn52p9kfdh04bfga3bsfbkwnwpddinsbkr69klf9cwkya"; depends=[Biobase ggplot2]; }; - iCARE = derive2 { name="iCARE"; version="1.16.0"; sha256="0llikw31dl2yw7wd3p1ci9b96jybb1b3gn4pb0gqlvbz44jl12cw"; depends=[gtools Hmisc plotrix]; }; - iCNV = derive2 { name="iCNV"; version="1.8.0"; sha256="1w4kljhn4cnhjw9aqxkvvpihhbgw44gxchcb4il02nshqwqnnfnv"; depends=[CODEX data_table dplyr fields ggplot2 rlang tidyr truncnorm]; }; - iCOBRA = derive2 { name="iCOBRA"; version="1.16.0"; sha256="0cvklagby3i221dlhyb51cciv0b3ch4a8z0wpm67q5n6n3k0cil1"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; }; - iCheck = derive2 { name="iCheck"; version="1.18.0"; sha256="17yyrbz751dq35dngz613yddjgcciffrwx1ncvq8m83b7nx27nyl"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; }; - iChip = derive2 { name="iChip"; version="1.42.0"; sha256="0rrya0j8sfchc8rsxigax8gbx1bdwcwfmdnkbk98pkh8sxr309i4"; depends=[limma]; }; - iClusterPlus = derive2 { name="iClusterPlus"; version="1.24.0"; sha256="0j987xvxixdz0wnhgp4kgfcgz5jffrcdhmldrgpgv582qmf4r94w"; depends=[]; }; - iGC = derive2 { name="iGC"; version="1.18.0"; sha256="17hh5r2vr8y6ajvwnyhg1dx01s2qjbn70q3ix5z6ds09nii06l2v"; depends=[data_table plyr]; }; - iPAC = derive2 { name="iPAC"; version="1.32.0"; sha256="0q4qvyq3170sh5xlr78jkax1rqax2cxjpambm4niynfm91fx8jri"; depends=[Biostrings gdata multtest scatterplot3d]; }; - iSEE = derive2 { name="iSEE"; version="2.0.0"; sha256="1sbmhm9pg7rvx2wlxk2i877m7jnqxpkn5hii084jcgw5sqp9va6r"; depends=[BiocGenerics circlize colourpicker ComplexHeatmap DT ggplot2 igraph mgcv rintrojs S4Vectors shiny shinyAce shinydashboard shinyjs shinyWidgets SingleCellExperiment SummarizedExperiment vipor viridisLite]; }; - iSEEu = derive2 { name="iSEEu"; version="1.0.1"; sha256="02hb578iy5bc9mmmlspcyj67nqq106br9fmz314ihj7c3cixz401"; depends=[DT ggplot2 iSEE S4Vectors shiny SingleCellExperiment SummarizedExperiment]; }; - iSeq = derive2 { name="iSeq"; version="1.40.0"; sha256="1k5fw917z94imflwz87zz0qlazsnvz2c8cka4i7l02h6nqs16yhn"; depends=[]; }; - iasva = derive2 { name="iasva"; version="1.6.0"; sha256="1fbbwz6fjw83ca9z910rv96wf4qv9v43fyxncydmn1d02fq9ck13"; depends=[BiocParallel cluster irlba SummarizedExperiment]; }; - ibh = derive2 { name="ibh"; version="1.36.0"; sha256="1wkd36673b1ksk7aph87awlpm7wwqfpa3qznkmv894nvmxhrd9r6"; depends=[simpIntLists]; }; - icetea = derive2 { name="icetea"; version="1.6.1"; sha256="0lxiyha44m2ir9h68wbizzzg28c38290dd709c50kpcfd9mfg7n9"; depends=[BiocGenerics BiocParallel Biostrings csaw DESeq2 edgeR GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges limma Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm6_ensGene VariantAnnotation]; }; - ideal = derive2 { name="ideal"; version="1.12.1"; sha256="1j1ys3sizvnkv8i54gf9vbakjaj84mmb3353lpj56wl2i4qvhvfb"; depends=[AnnotationDbi base64enc BiocParallel DESeq2 dplyr DT GenomicRanges ggplot2 ggrepel GO_db goseq GOstats gplots heatmaply IHW IRanges knitr limma pcaExplorer pheatmap plotly rentrez rintrojs rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; }; - idiogram = derive2 { name="idiogram"; version="1.64.0"; sha256="1fia0sa7xqylshk8alwkg2a9vgvgqicwss8jvplvppniyan364bh"; depends=[annotate Biobase plotrix]; }; - idr2d = derive2 { name="idr2d"; version="1.2.2"; sha256="1ycnjj4zy0k4qij7xv5i5w3jgd633nn4gxcb8n0z4kxh60117cq4"; depends=[dplyr futile_logger GenomeInfoDb GenomicRanges ggplot2 idr IRanges magrittr reticulate scales stringr]; }; - igvR = derive2 { name="igvR"; version="1.8.2"; sha256="0a7xrnqz0gvr52i3y744kvn960kjknvxdyv8vd7qc8dn496f0scp"; depends=[BiocGenerics BrowserViz GenomicAlignments GenomicRanges httpuv MotifDb RColorBrewer rtracklayer seqLogo VariantAnnotation]; }; - illuminaio = derive2 { name="illuminaio"; version="0.30.0"; sha256="0i587r1v5aa25w0jm1zvh7spc1gqmvza49i2kv00g1qzj8whq67c"; depends=[base64]; }; - imageHTS = derive2 { name="imageHTS"; version="1.38.0"; sha256="0xnwf59n9q08f2wsf3823amyw0bm936csaglcl07xwz5qcdvvplr"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; - immunoClust = derive2 { name="immunoClust"; version="1.20.1"; sha256="04hhz2f3i5gp3sinyx3x0nf539nadlwki3ix70yhxyd2i6xc0dz0"; depends=[flowCore lattice]; }; - impute = derive2 { name="impute"; version="1.62.0"; sha256="161p6l1cp3wwdynkxwvg0yhrh6yv20brdlplw5w5mavn4hf1nm0h"; depends=[]; }; - infercnv = derive2 { name="infercnv"; version="1.4.0"; sha256="0h7apzyizjjlfk47lr08b26a4j5ylq3iqj1ga76kk3q6hrg1vgrz"; depends=[ape argparse BiocGenerics caTools coda coin digest doParallel dplyr edgeR fastcluster fitdistrplus foreach futile_logger future ggplot2 gplots gridExtra HiddenMarkov Matrix RColorBrewer reshape rjags SingleCellExperiment SummarizedExperiment tidyr]; }; - intansv = derive2 { name="intansv"; version="1.28.0"; sha256="0w5qma19jyr026s86aa5zkj6spgk5b9khb9xml1yc98jbn5wa6mf"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; - interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.26.0"; sha256="02xh10d35v3q9hrddhs28mgmm9kii85aqqzfp5pacd6snradh3c6"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; - interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.26.3"; sha256="1x5vipqa4pgwpd62c1c58shnlpv3zyzzpf4wdwr00q1swkdb7wv3"; depends=[BiocGenerics DT shiny]; }; - inveRsion = derive2 { name="inveRsion"; version="1.36.0"; sha256="1kqpp9lp89z2rqacfmxmz3201n5vy5r5h962gm5cagwl552h3ivs"; depends=[haplo_stats]; }; - ipdDb = derive2 { name="ipdDb"; version="1.6.0"; sha256="17yirg8g7yk8xn43m6d55gk30rmp5985q9kbx1glr7bi9jcgi8rl"; depends=[AnnotationDbi AnnotationHub assertthat Biostrings DBI GenomicRanges IRanges RSQLite]; }; - isobar = derive2 { name="isobar"; version="1.34.0"; sha256="1xbapqk82vnv7cfp1v1xilmakmsna1sm2bnhlpbgivaqjcy0slxq"; depends=[Biobase biomaRt distr ggplot2 plyr]; }; - isomiRs = derive2 { name="isomiRs"; version="1.16.2"; sha256="0gi82ywgr394hwrniifgd8vvylrbafzf8hdrmv4jiwvwjm6ciigq"; depends=[AnnotationDbi assertive_sets Biobase BiocGenerics broom cluster cowplot DEGreport DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges limma RColorBrewer readr reshape rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; }; - iterClust = derive2 { name="iterClust"; version="1.10.0"; sha256="0iql8z0d9i110pcapb12666nhnp51xhkk53j2aqyd3ligyvsdfdv"; depends=[Biobase cluster]; }; - iterativeBMA = derive2 { name="iterativeBMA"; version="1.46.0"; sha256="1znc49q81fbk76038pcdbfh71h79g9663r03f5pxcldv69apiigm"; depends=[Biobase BMA leaps]; }; - iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.46.0"; sha256="0rqkdbw6lgvny6wcbz0c9j27bvj7m6qhrlb91v41nxq0m0cvmp2a"; depends=[BMA leaps survival]; }; - iteremoval = derive2 { name="iteremoval"; version="1.8.0"; sha256="1z2d4ggnh6n5k36rh1c9s2vmnbm4kvali7fsrb13xs60947c4r4m"; depends=[GenomicRanges ggplot2 magrittr SummarizedExperiment]; }; - ivygapSE = derive2 { name="ivygapSE"; version="1.10.0"; sha256="0fsfh8mczbv6ng79h84i9hz0awyrp69np25jv6k2krxixan58adk"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; }; - joda = derive2 { name="joda"; version="1.35.0"; sha256="044fhha4vrsfzz0bpa5q263lxqaz7nfb1b9hz0q870ja7j9wcmb3"; depends=[bgmm RBGL]; }; - karyoploteR = derive2 { name="karyoploteR"; version="1.14.1"; sha256="1wlnzkq58baqj9854nzf5rbglchb2xy4wsp3s0q8xfq8v0p3baxf"; depends=[AnnotationDbi bamsignals bezier biovizBase digest GenomeInfoDb GenomicFeatures GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - kebabs = derive2 { name="kebabs"; version="1.22.0"; sha256="10jgn45dq0x1brpx6lgl2z8p6pg06ncrhi3ywasj4sjgvakil63r"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; - keggorthology = derive2 { name="keggorthology"; version="2.40.0"; sha256="1y25xmj0f99nmlgi7ff0lqsyin5vx9jshmh3k98c4znls6k3hrpx"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; - kimod = derive2 { name="kimod"; version="1.15.0"; sha256="1rrjfy4hibvzwprb4cg9q83b0rlzrbw68j5rrg1frvddgfimycz4"; depends=[Biobase cluster]; }; - kissDE = derive2 { name="kissDE"; version="1.8.0"; sha256="1ng27jd3vw0hm9zc31jvgf38l95qb5v16vjaz5mnyq5lvx2bsx9l"; depends=[aod Biobase DESeq2 doParallel DSS foreach ggplot2 gplots matrixStats]; }; - lapmix = derive2 { name="lapmix"; version="1.54.0"; sha256="0dsw8zdj9srp2iwz8qhnpp7vnhmcfrinqcgig6phh3nb2kf4fwss"; depends=[Biobase]; }; - ldblock = derive2 { name="ldblock"; version="1.18.0"; sha256="0plw00n2zfgh029ab41dnydzgv2yxrapjp770147rx9pff4dngrv"; depends=[BiocGenerics EnsDb_Hsapiens_v75 ensembldb GenomeInfoDb GenomicFiles httr Matrix Rsamtools snpStats VariantAnnotation]; }; - les = derive2 { name="les"; version="1.38.0"; sha256="08lr8baqiml95qdir3qpqh3h37q03ghwl6i9blnj27n0mrn4w47v"; depends=[boot fdrtool gplots RColorBrewer]; }; - levi = derive2 { name="levi"; version="1.6.0"; sha256="0izaym5jl95k4qy3fhpmar4ags4b8fnqmndm80zym1pdh374by6c"; depends=[colorspace dplyr DT ggplot2 httr igraph knitr RColorBrewer Rcpp reshape2 shiny shinydashboard shinyjs testthat xml2]; }; - lfa = derive2 { name="lfa"; version="1.18.0"; sha256="1rnjkyf74x7a75xqpvd1fryhpd6v060hn14ivgn56cffqrni9z71"; depends=[corpcor]; }; - limma = derive2 { name="limma"; version="3.44.3"; sha256="09fnqxx4rzq5n447aqg2l6y0idfwgz2jxz99sifxsr2q8afzbcj6"; depends=[]; }; - limmaGUI = derive2 { name="limmaGUI"; version="1.64.0"; sha256="0fpi6czna9lg411yvw3vl0wamhqbmagvqwpxa523ym09pkpqb2lj"; depends=[limma R2HTML tkrplot xtable]; }; - lionessR = derive2 { name="lionessR"; version="1.2.0"; sha256="0s43dan4v0kn24dxjqmgwmd6dd6d6rfm9ppb4r0vy9b4a3rm8jfd"; depends=[S4Vectors SummarizedExperiment]; }; - lipidr = derive2 { name="lipidr"; version="2.2.0"; sha256="0j419bc6rjayswxlrsgkly7x1qza912q8jkc3fad47wfqrjrfrnf"; depends=[data_table dplyr fgsea forcats ggplot2 limma magrittr rlang ropls S4Vectors SummarizedExperiment tidyr]; }; - lmdme = derive2 { name="lmdme"; version="1.30.0"; sha256="1p35cb8ivd7rjkq4816dj4klnm9ylkjwwymnq4fjl2sv4bg3w0da"; depends=[limma pls stemHypoxia]; }; - loci2path = derive2 { name="loci2path"; version="1.8.0"; sha256="05vs1mh3nl9jn6p01c0rf1fza1dmqxd3kpixxhi39dynk6mbxc89"; depends=[BiocParallel data_table GenomicRanges pheatmap RColorBrewer S4Vectors wordcloud]; }; - logicFS = derive2 { name="logicFS"; version="2.8.0"; sha256="1zzh0qnmbddwy2rkrbcch5kjli8siq2iynrx52ipyb4xdy56ij88"; depends=[LogicReg mcbiopi survival]; }; - logitT = derive2 { name="logitT"; version="1.46.0"; sha256="0n1k1dqg37hj8y7piqlwapphzq747svn52fi7ini86kvg87gwxnx"; depends=[affy]; }; - lpNet = derive2 { name="lpNet"; version="2.20.0"; sha256="10lfscn56v06i5wrr7lvrralkmlcg8jnpdc3msrr1m61y2cbvz2m"; depends=[lpSolve]; }; - lpsymphony = derive2 { name="lpsymphony"; version="1.16.0"; sha256="072ikmd267n18hrj7dip4dp1vb5dinj82p3h95n2jaf04h9hwfn4"; depends=[]; }; - lumi = derive2 { name="lumi"; version="2.40.0"; sha256="196izc4mdh8j4f04fsf8cqm99w1inzpwy34kwvhz6zvxj2ywn1i9"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; }; - mAPKL = derive2 { name="mAPKL"; version="1.18.0"; sha256="0892l63nrblmn80xcga46ysimgv6yind0dc2662ys7vl8wcfich6"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; }; - mBPCR = derive2 { name="mBPCR"; version="1.42.0"; sha256="0kzbrb83gw7w9zcjjjqp5nwfr6sk8gghlk4n1zxdzrhhq5i8mpwk"; depends=[Biobase GWASTools oligoClasses]; }; - mCSEA = derive2 { name="mCSEA"; version="1.8.0"; sha256="1gz077xgfxw2fi7xwm938d091fffqj275r4w87ixbdi5sxq9rkif"; depends=[biomaRt fgsea GenomicFeatures GenomicRanges ggplot2 Gviz Homo_sapiens IRanges limma mCSEAdata S4Vectors SummarizedExperiment]; }; - maCorrPlot = derive2 { name="maCorrPlot"; version="1.58.0"; sha256="1266gq4ms9d8i7vby0i4lafdk6jpywkkjg3g6wpabadbfsqcmp65"; depends=[lattice]; }; - maPredictDSC = derive2 { name="maPredictDSC"; version="1.26.0"; sha256="0jk9ydcvkpyjizsad8m1wwaz6vg0vyd7i939b1pg4h73l8fafnjr"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; - maSigPro = derive2 { name="maSigPro"; version="1.60.0"; sha256="1yjsb4qqwvgp4l8brw15cckbnykqx8vxcsv5sma7hknhx6gza94w"; depends=[Biobase MASS mclust venn]; }; - maanova = derive2 { name="maanova"; version="1.58.0"; sha256="1vqq5y34cg27pr5ma51m60jcivcvarrz5h7j8rrb77vms08r6ad9"; depends=[Biobase]; }; - macat = derive2 { name="macat"; version="1.62.0"; sha256="1fjcp8cy0bn916bli0iy040mbhmmswlacy4pc5kcb4yji1nlj4x2"; depends=[annotate Biobase]; }; - made4 = derive2 { name="made4"; version="1.61.0"; sha256="1bm2n99rkl38y97zzg8mvb52jnf42ka0gqljzg4jphq8j97f8qj2"; depends=[ade4 gplots RColorBrewer scatterplot3d]; }; - maftools = derive2 { name="maftools"; version="2.4.12"; sha256="1hzgvi0siav2gzn3nc99bclk4am5b40jk8njkn4ggil223cn1ajv"; depends=[data_table RColorBrewer survival]; }; - maigesPack = derive2 { name="maigesPack"; version="1.52.0"; sha256="14jf4b0kcd0l9mbnrvl2c55a7pggyfj14kj1gf7mc0k34ys9q04g"; depends=[convert graph limma marray]; }; - makecdfenv = derive2 { name="makecdfenv"; version="1.64.0"; sha256="1mzsqkyyldcvf0b26j9pzwdy19n5hrsalvaw4vfhp36793f7r99v"; depends=[affy affyio Biobase zlibbioc]; }; - mapscape = derive2 { name="mapscape"; version="1.12.0"; sha256="0yzf1p9nvg7ncpadnvad50c4mrxc6isn32b3vvyfrhq0adqidykl"; depends=[base64enc htmlwidgets jsonlite stringr]; }; - marray = derive2 { name="marray"; version="1.66.0"; sha256="1sym3nis5qzg05b2in83xr019mvz8czy8qvispc0hzsq42yng6kd"; depends=[limma]; }; - martini = derive2 { name="martini"; version="1.8.0"; sha256="0qpa0l78miszjsraihv87p5s1isaamk3vibkpn95b7ab03hplz2r"; depends=[igraph Matrix Rcpp RcppEigen Rgin S4Vectors snpStats]; }; - maser = derive2 { name="maser"; version="1.6.0"; sha256="1940fgqjn5m76avh1hxp5j064hqm47335f0r939idm9qz5d2w4qa"; depends=[BiocGenerics data_table dplyr DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges reshape2 rtracklayer]; }; - maskBAD = derive2 { name="maskBAD"; version="1.32.0"; sha256="07hxng0dm6ksp0yd1cns6vdlrv0j08lb65bxakrhdj2jsxx85133"; depends=[affy gcrma]; }; - massiR = derive2 { name="massiR"; version="1.24.0"; sha256="1ki1886i90wfd5jmjjn6nddnkaaxq81xr5jmz9l226g5xmq7xh0l"; depends=[Biobase cluster diptest gplots]; }; - matchBox = derive2 { name="matchBox"; version="1.30.0"; sha256="1mfrxp3scmfakysbyqs5i7kjw9kx2jllcz1vnb6jpdlvah7928ij"; depends=[]; }; - matter = derive2 { name="matter"; version="1.14.0"; sha256="0ys1zmfyxz7lmffa8v02qcd5lg5aypjh3lhwzyzaal4cncx16fnp"; depends=[biglm BiocGenerics BiocParallel digest irlba Matrix ProtGenerics]; }; - mbkmeans = derive2 { name="mbkmeans"; version="1.4.1"; sha256="0h1phy2nvs4cpg7zm06dwlvm5v60s5029wg2h69p3cqiimciihrm"; depends=[beachmat benchmarkme BiocParallel ClusterR DelayedArray Matrix Rcpp RcppArmadillo Rhdf5lib SingleCellExperiment SummarizedExperiment]; }; - mcaGUI = derive2 { name="mcaGUI"; version="1.36.0"; sha256="1b7ww5vd295a5dws1qx5mzsdy95ch81svbk9xcmnjkyp5kjjmlfi"; depends=[bpca foreign lattice MASS OTUbase proto vegan]; }; - mdgsa = derive2 { name="mdgsa"; version="1.20.0"; sha256="1yv2fvjfmhvs2xdawm8clrsgasvmaiadfja606igrg0vdj4bmpwd"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; }; - mdp = derive2 { name="mdp"; version="1.8.0"; sha256="01dwydhclszzxhd91j4jdvpn88s77bn3dyfpf36q6wx2qzjfql6h"; depends=[ggplot2 gridExtra]; }; - mdqc = derive2 { name="mdqc"; version="1.50.0"; sha256="1qycxi2vsvlar6dmc1zrbf46cffw211ciabml0ppy79xakbpkai7"; depends=[cluster MASS]; }; - meshes = derive2 { name="meshes"; version="1.14.0"; sha256="0sbncp5czfjvb1dxs6v6yb0rdbgqrfbakdwq9maynv5zhnz3mla7"; depends=[AnnotationDbi DOSE enrichplot GOSemSim MeSH_db rvcheck]; }; - meshr = derive2 { name="meshr"; version="1.24.1"; sha256="0xa78zn22n0h60nsfrkg8xl442s61ja5y6nms66mlxn84s3hkbq3"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db RSQLite S4Vectors]; }; - messina = derive2 { name="messina"; version="1.24.0"; sha256="00qxnysx66ipqgl3l1394cyhc1sphprf22ivvphyydq0qrm3ixlz"; depends=[foreach ggplot2 plyr Rcpp survival]; }; - metaArray = derive2 { name="metaArray"; version="1.66.0"; sha256="1yi7r3vxirsnfypvh96fr29fcz38gwvy3qgcam93zpzb879wzydc"; depends=[Biobase MergeMaid]; }; - metaCCA = derive2 { name="metaCCA"; version="1.16.0"; sha256="0ag07gjhnfy77m8hdw4p47cbgakdyhp3pzy8v2vhfx5g5a6l7c3y"; depends=[]; }; - metaMS = derive2 { name="metaMS"; version="1.24.0"; sha256="0hzvvhs4q418dxac7ypdf3z1rdpdh35l4dfkpkb6zgar37cr0q8g"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; - metaSeq = derive2 { name="metaSeq"; version="1.28.0"; sha256="1jmbcd2xkq2mdbx8nhs76aiwzv76kwbx46s6y51r73ghspwnmpg4"; depends=[NOISeq Rcpp snow]; }; - metabomxtr = derive2 { name="metabomxtr"; version="1.22.0"; sha256="0f9x3x4hmcf60rbgnmdb7q5nbzlfj99idpwqg8zzw8baa0rh22mx"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; }; - metagene = derive2 { name="metagene"; version="2.20.0"; sha256="1k1y690phxdzc7b273zfi17vl5cvvlqx6bk833gx6mkwhfpb2gsy"; depends=[BiocParallel data_table DBChIP EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats muStat purrr R6 Rsamtools rtracklayer stringr]; }; - metagene2 = derive2 { name="metagene2"; version="1.4.0"; sha256="0l6fwa040a4y1i60sr2psafjrqn40362jp9qhgznx065iy6paw72"; depends=[BiocParallel data_table DBChIP dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr purrr R6 reshape2 Rsamtools rtracklayer]; }; - metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="2.8.0"; sha256="02fpiw905d4m57wzmvhv18kllnali6l4vq2rkjl8n2ifsmn3ia8m"; depends=[ape Biobase Biostrings dbplyr DECIPHER dplyr lattice lazyeval magrittr RSQLite S4Vectors stringr]; }; - metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.30.0"; sha256="0i4d4ff01mybz2b0nyyfyarnmhdx66w2rmxj23ryrf8xi7c8amzx"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer Wrench]; }; - metahdep = derive2 { name="metahdep"; version="1.46.0"; sha256="1rv3hv9w86rgbhrcsb6pmcmlzjc1ily27p39dwzz26mq7ihr2wj9"; depends=[]; }; - metaseqR = derive2 { name="metaseqR"; version="1.28.0"; sha256="0s9x4lhvy9ndckq98mxwp289qgvkwgi8k56j1himv6w1n9a87p85"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; - metaseqR2 = derive2 { name="metaseqR2"; version="1.0.11"; sha256="05xzig9kqrc679qvfyxl6nh0qajmqiv2xjc2q4x9lrx4gcd8fg86"; depends=[ABSSeq baySeq Biobase BiocParallel biomaRt Biostrings corrplot DESeq DESeq2 DSS DT EDASeq edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gplots heatmaply htmltools httr IRanges jsonlite limma locfit log4r magrittr NBPSeq NOISeq pander qvalue rmarkdown rmdformats Rsamtools RSQLite rtracklayer S4Vectors stringr SummarizedExperiment survcomp VennDiagram vsn zoo]; }; - metavizr = derive2 { name="metavizr"; version="1.12.0"; sha256="0k917l8wy3rshw3cx6pfnl19h8c2pzrcmy8z6c9b968xyrc84ydw"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; }; - methInheritSim = derive2 { name="methInheritSim"; version="1.10.0"; sha256="0fzyxvlql5f4zkyd29lamw29pvkz6n6jgfx6fl1j663jz7zlbc9s"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; }; - methVisual = derive2 { name="methVisual"; version="1.39.0"; sha256="0mz7b2y6hpwq1z1zy6i5ninbmrg4kvpqq90pkdpyxfvjdvccg8qn"; depends=[Biostrings ca gridBase gsubfn IRanges plotrix sqldf]; }; - methimpute = derive2 { name="methimpute"; version="1.10.0"; sha256="0nxx7a0lbd40nyssc5zk75hqqwv1sp6z1ccslzv7qvfdb4w0ra2k"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; }; - methrix = derive2 { name="methrix"; version="1.2.06"; sha256="1pl0qdg68rq0ijr90b05kvf7qmd4sh5anx4gclgzgh6wfyp16c1q"; depends=[BSgenome data_table DelayedArray DelayedMatrixStats ggplot2 HDF5Array matrixStats rjson SummarizedExperiment]; }; - methyAnalysis = derive2 { name="methyAnalysis"; version="1.30.0"; sha256="1ba85gwdnsakvphanidd1mcsz4w13qgy7pl39p4r2kmkk4q99pjz"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; }; - methylCC = derive2 { name="methylCC"; version="1.2.0"; sha256="05wlr1mp644fwv1yfgcgiyznd6ll4cz5xbv4psxqqjjqp550yirc"; depends=[Biobase bsseq bumphunter dplyr FlowSorted_Blood_450k genefilter GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IRanges magrittr minfi plyranges quadprog S4Vectors]; }; - methylGSA = derive2 { name="methylGSA"; version="1.6.1"; sha256="09nrf4iyvil19k7mkbjmi5d5add9dcwdgwgcqdb1mag9yzp5lkrj"; depends=[AnnotationDbi BiocParallel clusterProfiler ggplot2 GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 missMethyl org_Hs_eg_db reactome_db RobustRankAggreg shiny stringr]; }; - methylInheritance = derive2 { name="methylInheritance"; version="1.12.0"; sha256="176lc6hsaj4qvw7bw2iwqfkp8jypf4hg2kypkbyh78djiw43xidm"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; }; - methylKit = derive2 { name="methylKit"; version="1.14.2"; sha256="1qr13d2712ypbn96ijic2z5adr5dsd61kzscx7shw6vyj360rlm5"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust mgcv qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; }; - methylMnM = derive2 { name="methylMnM"; version="1.26.0"; sha256="0wawh429q3dpnjh4498v81c3sn5981h9p4lhk2657cvs2bxzg5xx"; depends=[edgeR statmod]; }; - methylPipe = derive2 { name="methylPipe"; version="1.22.0"; sha256="02ckzniha41qwzj21l28nl7nbjywmh2ca81hf8i8f08sqn2qy6iy"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; - methylSig = derive2 { name="methylSig"; version="1.0.0"; sha256="0105zbhzhbq4qrqghchr79qzs0mwfx0bw3ccz97qyrmf23aqyr0s"; depends=[bsseq DelayedArray DelayedMatrixStats DSS GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - methylumi = derive2 { name="methylumi"; version="2.34.0"; sha256="0phb2dyndnk9rv79nx246cn1sc9wbzdqqbgl6402knc7dgh799wr"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; - methyvim = derive2 { name="methyvim"; version="1.10.0"; sha256="1xy0iz2wym5hfbyi7h8y7kylrz7byx8z0lz4pzr1grmg14jiyf0l"; depends=[BiocGenerics BiocParallel bumphunter cluster doFuture dplyr future GenomeInfoDb ggplot2 ggsci gridExtra gtools IRanges limma minfi S4Vectors SummarizedExperiment superheat tmle]; }; - mfa = derive2 { name="mfa"; version="1.10.0"; sha256="1a7ss1sc1hps5vzg5a334br343hv4dgypz6rh9ads9v5zga69h4n"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; }; - mgsa = derive2 { name="mgsa"; version="1.36.0"; sha256="0bpylw0d7870bvgxfbgqp98d4p7m8m16k3y97n87d68ysiynza6h"; depends=[gplots]; }; - miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.12.0"; sha256="0b7n0zbbr4dhsamx6d6k5i44zcwmpbgk18z5ws9dqmrd8ihypcy8"; depends=[]; }; - miRLAB = derive2 { name="miRLAB"; version="1.18.0"; sha256="0dw1v9nncxbph0bihcdh43pszhdv1rs1ghm7yal5938m8d4awqz8"; depends=[Category ctc dplyr energy entropy glmnet GOstats gplots heatmap_plus Hmisc httr impute InvariantCausalPrediction limma org_Hs_eg_db pcalg RCurl Roleswitch stringr SummarizedExperiment TCGAbiolinks]; }; - miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.16.0"; sha256="0x83bz4mg4sr3kcjb6kzigyb4w5r3571y0whd77a57baw4n3ywr0"; depends=[AnnotationDbi DBI miRBaseVersions_db reshape2]; }; - miRNApath = derive2 { name="miRNApath"; version="1.48.0"; sha256="0r0s1hcq5wqlv0gpizh0abjqnk93fpii1hj4y128qd6fcgf1pkgf"; depends=[]; }; - miRNAtap = derive2 { name="miRNAtap"; version="1.22.0"; sha256="1bxllfl9nc7hfzc996jlri6sqnydm1hyg1awc253vvxyccvinbn0"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; - miRSM = derive2 { name="miRSM"; version="1.6.4"; sha256="06c8qygdbzr9yr30wki060bd18bv4a5nawjx0wf8pir4hlznyig8"; depends=[BiBitR BicARE biclust Biobase dbscan dynamicTreeCut energy fabia flashClust GFA GSEABase iBBiG igraph isa2 linkcomm MatrixCorrelation MCL mclust miRspongeR NMF org_Hs_eg_db PMA ppclust Rcpp rqubic s4vd SOMbrero subspace SummarizedExperiment WGCNA]; }; - miRcomp = derive2 { name="miRcomp"; version="1.18.0"; sha256="1n5n1sp204a7rzdi3wbmqk2wp997s33kfkijg9i5qzrfj041ndyz"; depends=[Biobase KernSmooth miRcompData]; }; - miRmine = derive2 { name="miRmine"; version="1.10.0"; sha256="1fllcmq5vb0fx4yxyrxwzflh5sy5yla8x4h12lb5vhy252c08y3b"; depends=[SummarizedExperiment]; }; - miRspongeR = derive2 { name="miRspongeR"; version="1.14.0"; sha256="074w9bchvj4il92zdm39agr3l83flizl82x2gcqqnmmj7phcsv8v"; depends=[clusterProfiler corpcor DOSE igraph linkcomm MCL org_Hs_eg_db Rcpp ReactomePA survival varhandle]; }; - microRNA = derive2 { name="microRNA"; version="1.46.0"; sha256="0z8phsya4chrj0sicxiakl4617d005ih0bfdmm4sz9l86is5q4mm"; depends=[Biostrings]; }; - microbiome = derive2 { name="microbiome"; version="1.10.0"; sha256="1gcpxb7rlm8y6354j4qbpvxkvf0h1qbxll3s2nszpfpq1li512jj"; depends=[dplyr ggplot2 phyloseq reshape2 Rtsne scales tibble tidyr vegan]; }; - microbiomeDASim = derive2 { name="microbiomeDASim"; version="1.2.0"; sha256="1ylmjwgmwx5qri75wacmfckz1xs6ixplfyhk5bsk124j76i73hag"; depends=[Biobase ggplot2 MASS Matrix metagenomeSeq mvtnorm pbapply phyloseq tmvtnorm]; }; - mimager = derive2 { name="mimager"; version="1.12.0"; sha256="12sm7c1xkf6rlhwgs34y88l62n5wbnr6z0mgfq8jlfq5haip4561"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; }; - minet = derive2 { name="minet"; version="3.46.0"; sha256="1nfsr5zclpsma72047j35vkzf51g09gs4ffz8gw8vv38w0gwqwsj"; depends=[infotheo]; }; - minfi = derive2 { name="minfi"; version="1.34.0"; sha256="0bl1sk9syy770d5wqa0k1y0wrs5x8sbj13px1v03v3693pdj081w"; depends=[beanplot Biobase BiocGenerics BiocParallel Biostrings bumphunter data_table DelayedArray DelayedMatrixStats genefilter GenomeInfoDb GenomicRanges GEOquery HDF5Array illuminaio IRanges lattice limma MASS mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; - mirIntegrator = derive2 { name="mirIntegrator"; version="1.18.0"; sha256="11k73fabgnzj3b50xxhccqn850gid2d8bkns272yhpi2qj0ip8cx"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; - missMethyl = derive2 { name="missMethyl"; version="1.22.0"; sha256="0h5m45v0s23a17b8glr5x2pmaz79znillnca7zdr7fvs0da3xdxg"; depends=[AnnotationDbi BiasedUrn Biobase BiocGenerics GenomicRanges GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest IRanges limma methylumi minfi org_Hs_eg_db ruv S4Vectors statmod stringr SummarizedExperiment]; }; - missRows = derive2 { name="missRows"; version="1.8.0"; sha256="031ahbgpb4808wb6rr3qvaxq2gn3am28kjxcndlwpcwmhd55dpaq"; depends=[ggplot2 gtools MultiAssayExperiment plyr S4Vectors]; }; - mitch = derive2 { name="mitch"; version="1.0.10"; sha256="1qajkgni8pinkh0s95r910zwc50syzwxjdnx23a7imddwpfjca88"; depends=[beeswarm echarts4r GGally ggplot2 gplots gridExtra knitr MASS plyr reshape2 rmarkdown]; }; - mitoODE = derive2 { name="mitoODE"; version="1.26.1"; sha256="1iskvlg811dfpzcr6xskw73piwf2ga3wv3c17hgppc66zygc6z3f"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; }; - mixOmics = derive2 { name="mixOmics"; version="6.12.2"; sha256="1nkqlvm9j1f4vfj3f3kyxqgan38rpa9imimvl9pwivvsfl647vvc"; depends=[corpcor dplyr ellipse ggplot2 gridExtra igraph lattice MASS matrixStats rARPACK RColorBrewer reshape2 tidyr]; }; - mnem = derive2 { name="mnem"; version="1.4.5"; sha256="1arbsisinygjxhg94j74np4bmjv3yrpba08xdgm31b9ip6nkyb7g"; depends=[cluster data_table e1071 flexclust graph lattice Linnorm matrixStats naturalsort Rcpp RcppEigen Rgraphviz snowfall tsne]; }; - mogsa = derive2 { name="mogsa"; version="1.22.1"; sha256="0gzi0j6cx6scb3gcc8xgv117yzma79cgllyklss8wrb97l1w8nvz"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; - monocle = derive2 { name="monocle"; version="2.16.0"; sha256="1vziidavlyhixmx6j7lf29qx8xcjwrc9q3x2f63gcff41q3jf9xd"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; }; - mosaics = derive2 { name="mosaics"; version="2.26.0"; sha256="1n5s8j7v1l619msnxfg88rpkgm2kcldm4y1v491h1bnxw336gyjn"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; - motifRG = derive2 { name="motifRG"; version="1.31.0"; sha256="1ml6zyzlk8yjbnfhga2qnw8nl43rankvka0kc1yljxr2b66aqbhn"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; }; - motifStack = derive2 { name="motifStack"; version="1.32.1"; sha256="02vmkgn36n5xpmizy33znlzgmi3w5hnhsibgisbnhwwgxpkrwpcd"; depends=[ade4 Biostrings ggplot2 grImport2 htmlwidgets MotIV scales XML]; }; - motifbreakR = derive2 { name="motifbreakR"; version="2.2.0"; sha256="09czgmyjcycsvyvadpjddwwvqvxzd0ba3zhczh4mqc09gwa6vhlm"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr SummarizedExperiment TFMPvalue VariantAnnotation]; }; - motifcounter = derive2 { name="motifcounter"; version="1.12.0"; sha256="082hc9g08qsc659wcq8kazaghd9japichvdb6821cfm2vwafc93a"; depends=[Biostrings]; }; - motifmatchr = derive2 { name="motifmatchr"; version="1.10.0"; sha256="145d9nykhzaf9kr30iq38c9yyv2pn459b7q4ypfmgi1g302lxfxz"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; }; - mpra = derive2 { name="mpra"; version="1.10.0"; sha256="1p12skbhgi4r1xcmg0fbf7696y9694r1ih95pi85xv5vjqwp1jx0"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; }; - msPurity = derive2 { name="msPurity"; version="1.14.1"; sha256="0fgy4k823xz85g03758hzhvsfmyqr7r543n52mb9lypz3h6pqarz"; depends=[DBI dbplyr doSNOW dplyr fastcluster foreach ggplot2 jsonlite magrittr mzR plyr Rcpp reshape2 RSQLite stringr uuid]; }; - msa = derive2 { name="msa"; version="1.20.1"; sha256="027l9kvhf6y8rh8hb9lg0g2qdjvyk4fsdpm35g7y5zc5y75p8cv5"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; - msgbsR = derive2 { name="msgbsR"; version="1.12.0"; sha256="0v86y2ivzy0b4zrwcmy0vagnqms2735r552a6z1md2hx6lh9k2qi"; depends=[BSgenome easyRNASeq edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; }; - msmsEDA = derive2 { name="msmsEDA"; version="1.26.0"; sha256="02fm1z9fidmhkkhijxmjzhzl2kmahif24gcllhfjc2g191kbwns2"; depends=[gplots MASS MSnbase RColorBrewer]; }; - msmsTests = derive2 { name="msmsTests"; version="1.26.0"; sha256="0vg8523kwc3xals6ghja6z2rdcc0q8nzdh2h2637b6clkbs0g1cy"; depends=[edgeR msmsEDA MSnbase qvalue]; }; - multiClust = derive2 { name="multiClust"; version="1.18.0"; sha256="0sgjdv2m7za4whd4f13nl8acpag7j4v63zchljva6wp0j5xhgnx4"; depends=[amap cluster ctc dendextend mclust survival]; }; - multiHiCcompare = derive2 { name="multiHiCcompare"; version="1.6.0"; sha256="0zpzi2lrbbpij8q11h4bs9dqshqkb2fgdf0pdvhqygvxvxva3bw9"; depends=[BiocParallel BLMA data_table dplyr edgeR GenomeInfoDb GenomeInfoDbData GenomicRanges HiCcompare metap pbapply pheatmap qqman]; }; - multiMiR = derive2 { name="multiMiR"; version="1.10.0"; sha256="1x9pl8f0lb6ihvl2b4p6h9p1r4m212cg0722apzavqm2m4w51kfk"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; }; - multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.12.0"; sha256="05g3dp37sg7sdn2qlvx9sa4d1yvhacqh47f9anp0wpzwypxifxfx"; depends=[doParallel foreach SummarizedExperiment]; }; - multiscan = derive2 { name="multiscan"; version="1.48.0"; sha256="0ai9bj0xpakkfk3yndrllmqnkiskfymsq9kq2pwdsblsmsgi2yw3"; depends=[Biobase]; }; - multtest = derive2 { name="multtest"; version="2.44.0"; sha256="12li7nzzygm3sjfx472095irqpawixk48d0k591wlnrms6sxchx2"; depends=[Biobase BiocGenerics MASS survival]; }; - muscat = derive2 { name="muscat"; version="1.2.1"; sha256="1vwc71jf8li9g4qbfgii7dwj24hmaav2ww4zkjabkxd7icmwph4z"; depends=[BiocParallel blme ComplexHeatmap data_table DESeq2 dplyr edgeR ggplot2 glmmTMB limma lme4 lmerTest Matrix matrixStats progress purrr S4Vectors scales scater sctransform SingleCellExperiment SummarizedExperiment variancePartition viridis]; }; - muscle = derive2 { name="muscle"; version="3.30.0"; sha256="1j0x29ahh6981b8r96k3659kyrzly3666jwx6gplrb7xfiixirf4"; depends=[Biostrings]; }; - mygene = derive2 { name="mygene"; version="1.24.0"; sha256="1cc6x81i79pi61npvrlhwl84jhnzzbc94hajqrylipnni2y60n62"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; - myvariant = derive2 { name="myvariant"; version="1.18.0"; sha256="1m2cc1p2sf7pqrqws1vmybmb6f4adxdy1aba063c854p7c22gmkp"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; - mzID = derive2 { name="mzID"; version="1.26.0"; sha256="0y50lzkdamkpz67f6r5whp246qsxpbammjil7g8vjprx0c4jk5n5"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; - mzR = derive2 { name="mzR"; version="2.22.0"; sha256="1r8j8yiz5lcan7j4h37sza2kwczl48dxvld3da3ghjjq67cdc2cm"; depends=[Biobase BiocGenerics ncdf4 ProtGenerics Rcpp Rhdf5lib zlibbioc]; }; - nanotatoR = derive2 { name="nanotatoR"; version="1.4.0"; sha256="12ydir5ikxjb2sqgnjapb1gb1wn1d66iiis3s0fxsqkp1nkfid0c"; depends=[AnnotationDbi hash httr knitr openxlsx org_Hs_eg_db rentrez rtracklayer stringr testthat]; }; - ncGTW = derive2 { name="ncGTW"; version="1.2.0"; sha256="19qlxpwc0ir5bvwnls8k87lv7mrp8aa1kly627vy8326na9f8la9"; depends=[BiocParallel Rcpp xcms]; }; - ncdfFlow = derive2 { name="ncdfFlow"; version="2.34.0"; sha256="0avxn2abh4fk1gkncrxz7jwzgvd90m3m0ly318q0z38cjhsw3j9f"; depends=[BH Biobase BiocGenerics flowCore Rcpp RcppArmadillo Rhdf5lib zlibbioc]; }; - ndexr = derive2 { name="ndexr"; version="1.10.0"; sha256="11zzh4p9gj5srkmv5gx563s58q0n9hs84pw5szb6xs5jkfx85jy9"; depends=[httr igraph jsonlite plyr tidyr]; }; - netDx = derive2 { name="netDx"; version="1.0.4"; sha256="1adn2gh5am1x61s3waiar7zivisbg46vmjnccfqg488d41minj82"; depends=[bigmemory BiocFileCache clusterExperiment combinat doParallel foreach GenomeInfoDb GenomicRanges ggplot2 glmnet igraph IRanges MultiAssayExperiment netSmooth pracma rappdirs RColorBrewer RCy3 reshape2 ROCR Rtsne S4Vectors scater]; }; - netReg = derive2 { name="netReg"; version="1.11.0"; sha256="08caaspcjgmczawmp5ng6xl5lsp1nbwc72mww69isx9bnx25vn21"; depends=[Rcpp RcppArmadillo]; }; - netSmooth = derive2 { name="netSmooth"; version="1.8.0"; sha256="13ypki31mq03kxg30hcpj2p5nf5fjhr779mfyynx9dzzm6jq9kf4"; depends=[cluster clusterExperiment data_table DelayedArray entropy HDF5Array Matrix scater SingleCellExperiment SummarizedExperiment]; }; - netbenchmark = derive2 { name="netbenchmark"; version="1.19.0"; sha256="13ni8hi5n4arp5p12ximw04my79vckadjamadxj63rlmkknff6sp"; depends=[c3net corpcor fdrtool GeneNet GENIE3 grndata Matrix minet pracma Rcpp]; }; - netbiov = derive2 { name="netbiov"; version="1.22.0"; sha256="03c2v8ihlrk6v0wqkdy047p6nf7iwaal4s0mm5l4hcjihalsg1pl"; depends=[igraph]; }; - netboost = derive2 { name="netboost"; version="1.4.0"; sha256="190zwyfadlqz162qp08dbrvnznm5p1zbfjm8xm8p510jmsb2fxkl"; depends=[colorspace dynamicTreeCut impute R_utils Rcpp RcppParallel WGCNA]; }; - netboxr = derive2 { name="netboxr"; version="1.0.1"; sha256="1c496av5h6iqsvbl6dd1xh8yrcy8vw5l12wnmxn8jjjxl7fgwfdx"; depends=[clusterProfiler data_table DT gplots igraph jsonlite plyr RColorBrewer]; }; - nethet = derive2 { name="nethet"; version="1.20.1"; sha256="025ylsxvqdz50bggzmcf535fhflj29flic49956hygpf0mjyiqh6"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network]; }; - netprioR = derive2 { name="netprioR"; version="1.14.0"; sha256="0qwbz1pjyppwvf5sfd14n9q5w2hpn8ns5pdgl16fj1w1y3nnih2q"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; }; - netresponse = derive2 { name="netresponse"; version="1.48.0"; sha256="0sdly4lba4yyqxqdkx45zvj2p3179llkkf65i62wp9p01pc0xgpa"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; - networkBMA = derive2 { name="networkBMA"; version="2.28.0"; sha256="0pymqhmrwmbkdvjaf0wk6wqgv3lbkmsw6g21nqm6vjvilf2rgcl9"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; }; - ngsReports = derive2 { name="ngsReports"; version="1.4.2"; sha256="11jkp6dgrbmma5c0cpa0gnjmpm2xix83wkmq8hpfyqkc9zwrc7w0"; depends=[BiocGenerics Biostrings checkmate dplyr DT FactoMineR forcats ggdendro ggplot2 lubridate pander plotly readr reshape2 rmarkdown Rsamtools scales ShortRead stringr tibble tidyr tidyselect truncnorm viridisLite XVector zoo]; }; - nnNorm = derive2 { name="nnNorm"; version="2.52.0"; sha256="1qd5ygnmnh0bimzlxz587dzm67vhy9yb1ayyyqbc46p2bz1h3bzf"; depends=[marray nnet]; }; - nondetects = derive2 { name="nondetects"; version="2.18.0"; sha256="1v24r3dglfj7zy15h7fn22g0jh98xmiqs0kicriapf2s3qbgqdk9"; depends=[arm Biobase HTqPCR limma mvtnorm]; }; - normalize450K = derive2 { name="normalize450K"; version="1.16.0"; sha256="00yrx8pbyk6rinbjaz78xbkaqaakqwjv5njsnjjk5p4b5x4av49z"; depends=[Biobase illuminaio quadprog]; }; - normr = derive2 { name="normr"; version="1.14.0"; sha256="03zxwhk450qpq0svmpm9gxq234j8rvavfm1hysifm39hjbg67hwj"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; }; - npGSEA = derive2 { name="npGSEA"; version="1.24.0"; sha256="1xb0r4l85g0rgkvq9hgdsagx7iv987fbx666l9f38cjg6d8904x0"; depends=[Biobase BiocGenerics GSEABase]; }; - nuCpos = derive2 { name="nuCpos"; version="1.6.0"; sha256="1v5k0x463ln8y74zbs4hpqjk6sk5sav6fd0nxhih1nd2qryb8z12"; depends=[]; }; - nucleR = derive2 { name="nucleR"; version="2.20.0"; sha256="1x5myzzbb0nh69fpfxkjrdr8l95x7hw6yc0rbysv7g9x74xqyi30"; depends=[Biobase BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr Rsamtools S4Vectors ShortRead]; }; - nucleoSim = derive2 { name="nucleoSim"; version="1.16.0"; sha256="0gfkz0c7ifldzjp2lf12ma39lisjg97m8vrwk6dcff03pkkjl39i"; depends=[IRanges S4Vectors]; }; - occugene = derive2 { name="occugene"; version="1.48.0"; sha256="0db8qq19nmin6bw4wwvq1nmrr6wimi53d1pvwchln4q3kp3bkslb"; depends=[]; }; - odseq = derive2 { name="odseq"; version="1.16.0"; sha256="0pf7ij74zms0l3zrh0mjfx4ahjyym1sf06lzh9s6v7mrn5h2rclz"; depends=[kebabs mclust msa]; }; - oligo = derive2 { name="oligo"; version="1.52.1"; sha256="1gpvr33pwzz1glzajcipvjcplb7yxvjj00q0ybqcc3wa47bhfkwd"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; - oligoClasses = derive2 { name="oligoClasses"; version="1.50.4"; sha256="1d8c3i8v8kcm1afgpz6zc1iysip7993y8456cqxl37f7n6n0ax67"; depends=[affyio Biobase BiocGenerics BiocManager Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; - omicRexposome = derive2 { name="omicRexposome"; version="1.10.0"; sha256="0s552v7a5p7l9nv9hfzm1094mv5ayqky0bnky53b19mkkr64pc4w"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; }; - omicade4 = derive2 { name="omicade4"; version="1.28.2"; sha256="1fgrjxg876bb2ajcdvkzr1w8pawaxs3y2qcf0yra7wi96hylvz1n"; depends=[ade4 made4]; }; - omicplotR = derive2 { name="omicplotR"; version="1.8.0"; sha256="00xa2d2hlcv4wkbd9n1cpvi4mk7rw5yq1rjzk37qzcrhd2z631c2"; depends=[ALDEx2 compositions DT jsonlite knitr matrixStats rmarkdown shiny vegan zCompositions]; }; - omicsPrint = derive2 { name="omicsPrint"; version="1.8.0"; sha256="0snblm6f6q9jmcg45rwywcbcqiq492fs7fdc82v5wbvkbhyp93ba"; depends=[MASS matrixStats MultiAssayExperiment RaggedExperiment SummarizedExperiment]; }; - oncomix = derive2 { name="oncomix"; version="1.10.0"; sha256="0hxbagxra2630yjl858prlijgcyq1v4qz7aq0b78vrwpcrnv5rqj"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; }; - oneSENSE = derive2 { name="oneSENSE"; version="1.10.0"; sha256="0zd6xwrggsc4p66f8dm387mlpwficxa8zl880xprkqsia74g7m2k"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; }; - onlineFDR = derive2 { name="onlineFDR"; version="1.6.0"; sha256="1laqprlxbfy8lfdcihsbqvwzi5gwvgwz5d7ihri77nvddild9swr"; depends=[]; }; - ontoProc = derive2 { name="ontoProc"; version="1.10.1"; sha256="0fm53qm1qq4nf4669j5ls9440jg8hhhyn1wkm5sjglg2avz4xb19"; depends=[AnnotationDbi Biobase dplyr DT graph magrittr ontologyIndex ontologyPlot Rgraphviz S4Vectors shiny]; }; - openCyto = derive2 { name="openCyto"; version="2.0.0"; sha256="10dyd6dddskv70vhpwfbsqdb8pb9i3ka0fgvl1h51wqlckbsj89m"; depends=[Biobase BiocGenerics clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; - openPrimeR = derive2 { name="openPrimeR"; version="1.10.4"; sha256="1hv2q37s6f1ns17jhcqnlwk2arqd2ikwy4ncp3fbzc3xwlqc7qwb"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; }; - openPrimeRui = derive2 { name="openPrimeRui"; version="1.10.0"; sha256="0vx3fba6faczqv3m5zaw53md9d6j0sm0c2n4w5gr5skyyhqfwpy6"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; }; - oposSOM = derive2 { name="oposSOM"; version="2.6.0"; sha256="1dickvmach4vm3553l4xxkgbmbn7pjvafcsg0bpf6b03w1nb5rdg"; depends=[ape Biobase biomaRt fastICA fdrtool igraph pixmap Rcpp RcppParallel scatterplot3d tsne]; }; - oppar = derive2 { name="oppar"; version="1.16.0"; sha256="0k8r8a11x4ckjc14fxy84jw9dn2kj2k9m1x1wpbs4hzfj013yk9q"; depends=[Biobase GSEABase GSVA]; }; - oppti = derive2 { name="oppti"; version="1.2.0"; sha256="0v8mrdz1li7g1g827h0m4gbhpxmz1qffhpczmyw7pxd6467c15yp"; depends=[devtools ggplot2 knitr limma pheatmap RColorBrewer reshape]; }; - optimalFlow = derive2 { name="optimalFlow"; version="1.0.1"; sha256="0jzaq9f4r631d0a3przf42sg19p4ssblb48v9x5dry3nxnjch59s"; depends=[dbscan doParallel dplyr ellipse flowMeans foreach optimalFlowData randomForest Rfast rgl rlang robustbase transport]; }; - pRoloc = derive2 { name="pRoloc"; version="1.28.0"; sha256="0g2ji5cx3wxvni2rf2y1np7fha4yvcx6rzg2arkrhsgqnh731kv4"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class coda dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr LaplacesDemon lattice MASS mclust mixtools MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; }; - pRolocGUI = derive2 { name="pRolocGUI"; version="1.22.0"; sha256="1c22zfkk8ww4h79mfwig5x177gnqb73y136d5vjjylgpxvrsd20a"; depends=[Biobase dplyr DT ggplot2 MSnbase pRoloc scales shiny]; }; - packFinder = derive2 { name="packFinder"; version="1.0.0"; sha256="1zd991v8ni6qid2prd2i8yqnzcp9v008c7x8xah77ci9aslq8wzn"; depends=[ape Biostrings GenomicRanges IRanges kmer S4Vectors]; }; - paircompviz = derive2 { name="paircompviz"; version="1.26.0"; sha256="0zbzxl0y74v8wphza2z1yj7la0y377bkfh6lkq1hhnl852gpyb8g"; depends=[Rgraphviz]; }; - pandaR = derive2 { name="pandaR"; version="1.20.0"; sha256="1zz2izp2c799bxsmij4l1ax6d407r0dxv9w3vsfcfps1lyn2riz9"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; }; - panelcn_mops = derive2 { name="panelcn.mops"; version="1.10.0"; sha256="1wbx9i6720arik9lylv6nahrp94y85127ad4iabjqqj6z0xhqklf"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; - panp = derive2 { name="panp"; version="1.58.0"; sha256="1ylp241hfrv0gnma993b7dn8hmgqxa8fv8mhb8qrbyk2r1mgja3w"; depends=[affy Biobase]; }; - parglms = derive2 { name="parglms"; version="1.20.0"; sha256="1866xpmvx6gnvdcbm8j1w7rjvvyz3ahiji7rahv50qydr7cakwg0"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; - parody = derive2 { name="parody"; version="1.46.0"; sha256="1crk1vdpn97q6gq0w7yx9xczf1wcqifdvqj6aqmllcqm0sihq9sx"; depends=[]; }; - pathRender = derive2 { name="pathRender"; version="1.56.0"; sha256="0s1iknyis8564dmi3ylrx8z7by2qc5rl9ha1pmg1jjsvc42ralwk"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; - pathVar = derive2 { name="pathVar"; version="1.18.0"; sha256="0yx1g7qxn6zwv7dzsqd3b0v1mda8ivikvdwsyc4m6xzchc3wpzs2"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; - pathifier = derive2 { name="pathifier"; version="1.26.0"; sha256="1ss4ix86rpzgjsw6xz0hshax3295n5rsjgyvr083syi8zjxwr9gm"; depends=[princurve R_oo]; }; - pathprint = derive2 { name="pathprint"; version="1.17.0"; sha256="1w6h8625smr78lbn128hjvganzpg6cwypf6g599apxd5dzwpr4pf"; depends=[]; }; - pathview = derive2 { name="pathview"; version="1.28.1"; sha256="04pv8lcxfpihhmrwczxc7ndv7a1bhlaxck7lyp9z0j0qa9jj7zxj"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; - pathwayPCA = derive2 { name="pathwayPCA"; version="1.4.0"; sha256="1g32jd02lh2vzq94hhwbc0gq04sw8n4jrl4xvi1w1ydzz04f3vzc"; depends=[lars survival]; }; - paxtoolsr = derive2 { name="paxtoolsr"; version="1.22.0"; sha256="0z3hycswsqw6ny0hr94jfsrljgx6k52llfzdxh2ifrlnjp722xky"; depends=[httr igraph jsonlite plyr R_utils readr rJava rjson XML]; }; - pcaExplorer = derive2 { name="pcaExplorer"; version="2.14.2"; sha256="0ibjnzdwsbnvvia3cppwkdhl4ads5i9azpbp1bnvl445iixz2dfm"; depends=[AnnotationDbi base64enc biomaRt DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats heatmaply IRanges knitr limma NMF pheatmap plotly plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; }; - pcaMethods = derive2 { name="pcaMethods"; version="1.80.0"; sha256="10cww4jxyynkwxbbsx804nwac31j0hh8dgisygld0q663gaxkgni"; depends=[Biobase BiocGenerics MASS Rcpp]; }; - pcot2 = derive2 { name="pcot2"; version="1.56.0"; sha256="101jxhdmr2gvkq2r0s2c3qvjnfqdnrk7nn2xzm71z2ysmmvbdqjv"; depends=[amap Biobase]; }; - pcxn = derive2 { name="pcxn"; version="2.10.0"; sha256="0r8fpdn0i5ds8g7y63hyq8b6as7dvvkdqsqi97jwr206bng4hz47"; depends=[pcxnData pheatmap]; }; - pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.52.0"; sha256="0w8ajj8rrzqcf6ri65l6l48y8hkxk92sd6bxssyi0dwfjl9x304n"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - peakPantheR = derive2 { name="peakPantheR"; version="1.2.0"; sha256="0536xlvc0xb4fqhgyn2js6rmdllci6rqbzdc9s3bbk4xwcp171qv"; depends=[doParallel foreach ggplot2 gridExtra minpack_lm MSnbase mzR scales stringr XML]; }; - peco = derive2 { name="peco"; version="1.0.0"; sha256="1g1z7dxz22z4i3l3dh20a1l2x58pk1plcain22dq68nrfxvr51ns"; depends=[assertthat circular conicfit doParallel foreach genlasso scater SingleCellExperiment SummarizedExperiment]; }; - pepStat = derive2 { name="pepStat"; version="1.22.0"; sha256="1nqypcv1qxpz39hanig3dy4f80nykn28zix8j20dxrs7mj5l3npa"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; - pepXMLTab = derive2 { name="pepXMLTab"; version="1.22.0"; sha256="0pqkfp6plvs3wbvlgmkjnawlgng98122z2kjpvbr8s3q6f08hsk6"; depends=[XML]; }; - perturbatr = derive2 { name="perturbatr"; version="1.8.0"; sha256="1kf4f3zj7qsxjl01vbb4z57350gp0mq36xs57i2gnbsdcbcnwldz"; depends=[assertthat diffusr doParallel dplyr foreach formula_tools ggplot2 igraph lazyeval lme4 magrittr rlang scales tibble tidyr]; }; - pgca = derive2 { name="pgca"; version="1.12.0"; sha256="0r2xprbbqgcrsp3gidsalnkxabr8vww880wp1z8vzbj977kqbm60"; depends=[]; }; - phantasus = derive2 { name="phantasus"; version="1.8.0"; sha256="0gg9ppd6xph0amyb0lxvpc4yr8zi8h3is9ns4mvvspz6r1h4rycp"; depends=[AnnotationDbi assertthat Biobase ccaPP DESeq2 fgsea GEOquery ggplot2 gtable htmltools httpuv httr jsonlite limma Matrix opencpu pheatmap protolite rhdf5 Rook scales stringr svglite]; }; - phemd = derive2 { name="phemd"; version="1.4.0"; sha256="176hb1i70jmg03dv942dra88v8ywd22vcihp4imz2awya9gah96s"; depends=[Biobase BiocGenerics cluster cowplot destiny ggplot2 igraph maptree monocle phateR pheatmap pracma RANN RColorBrewer reticulate Rtsne S4Vectors scatterplot3d Seurat SingleCellExperiment SummarizedExperiment transport VGAM]; }; - phenoTest = derive2 { name="phenoTest"; version="1.36.0"; sha256="12r71rmpk9wr1xyjp533mqk9dg385xy9k81lqxig2gxw7c7zzjbs"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach limma mgcv survival xtable]; }; - phenopath = derive2 { name="phenopath"; version="1.12.0"; sha256="0ccdds0ir4b5farniva5gkr6i52km3hda1xkfi9179vlravlg44c"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; }; - philr = derive2 { name="philr"; version="1.14.0"; sha256="1a0blg0a3x23cj1zbkyfa8jyl8vvihmn45s56vkfgxy0lf1yz7gi"; depends=[ape ggplot2 ggtree phangorn tidyr]; }; - phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.12.0"; sha256="0dw93ac9arb44cs4098s3x784gy6wy9x53yqyk1znhsy36cq4hw5"; depends=[matrixStats plyr]; }; - phyloseq = derive2 { name="phyloseq"; version="1.32.0"; sha256="0j7vhl6wbdigi2b0n01ynwjbzknqna9zaiwbpbsx9vvilfp35vgf"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; - piano = derive2 { name="piano"; version="2.4.0"; sha256="0ky8xr5skini6fnshf0hgvpsvqjg8nszb39dxggw7fzfnlbhd1dk"; depends=[Biobase BiocGenerics DT fgsea gplots htmlwidgets igraph marray relations scales shiny shinydashboard shinyjs visNetwork]; }; - pickgene = derive2 { name="pickgene"; version="1.60.0"; sha256="159zzby0xg12p7w7iiq5zfpxbgy0z053qf9w0951ja446lchvnaz"; depends=[MASS]; }; - pipeFrame = derive2 { name="pipeFrame"; version="1.4.0"; sha256="08c8q0y5nm4ayw82jbg9hrzgk2nymiy79qyrk16pdhy7bfc6f5r6"; depends=[Biostrings BSgenome digest GenomeInfoDb magrittr visNetwork]; }; - pkgDepTools = derive2 { name="pkgDepTools"; version="1.54.0"; sha256="1pg9i1m2h4lb95xdrq6snnbgiy0pyw37hpq3p9wwki9msrqagzyi"; depends=[graph RBGL]; }; - plethy = derive2 { name="plethy"; version="1.26.0"; sha256="1s27jx7nkpyin0mcjv2rxylfwixbdpykf7jgy9i4s41a3fqgv2gb"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; - plgem = derive2 { name="plgem"; version="1.60.0"; sha256="1fs5nbjnrm7x23y7d9krq56r1kzxka40ca1rs6sq70mn6syhj90a"; depends=[Biobase MASS]; }; - plier = derive2 { name="plier"; version="1.58.0"; sha256="0qw148ac0jm7k7bd2h9dpxl0n23h6343rwyqnbc5ram7xdmxknkn"; depends=[affy Biobase]; }; - plotGrouper = derive2 { name="plotGrouper"; version="1.6.0"; sha256="1xff519p1gavb4a3acwld75j7vv3b8q2phz2gi2ca4agcch9qbz3"; depends=[colourpicker dplyr egg ggplot2 ggpubr gridExtra gtable Hmisc magrittr readr readxl rlang scales shiny shinythemes stringr tibble tidyr]; }; - plrs = derive2 { name="plrs"; version="1.27.0"; sha256="00dpkcmiy6pam66cmvhggnq87x154q0y5cb6sgzmldix3n13rb41"; depends=[Biobase BiocGenerics CGHbase ic_infer marray quadprog Rcsdp]; }; - plw = derive2 { name="plw"; version="1.47.0"; sha256="0ma5nlij7bhi8jlvg87v76jwk1n5ggcd1z0b9l5pi8xzz4ngsj88"; depends=[affy MASS]; }; - plyranges = derive2 { name="plyranges"; version="1.8.0"; sha256="1inndy1fhawb1qplk3xfb9b93fm9xpd3xajd22m4n1iyf9l3drv4"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr rlang Rsamtools rtracklayer S4Vectors tidyselect]; }; - pmm = derive2 { name="pmm"; version="1.20.0"; sha256="1jsa9rblzdacm35gw6sxhs9jkcsrlkv5ajkdi8a09sjgx9pva0r2"; depends=[lme4]; }; - pmp = derive2 { name="pmp"; version="1.0.0"; sha256="1n5jm9mw95bai4vv1r0nb6p67adjkm732kj05mhqli6bb43998pv"; depends=[ggplot2 impute matrixStats missForest pcaMethods reshape2 S4Vectors SummarizedExperiment]; }; - podkat = derive2 { name="podkat"; version="1.20.0"; sha256="1iw4v4sivkma8gswhnlk5311m0j79maixh2zakd5h1h3g9zpvrxk"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rhtslib Rsamtools]; }; - pogos = derive2 { name="pogos"; version="1.8.0"; sha256="10d1lqdn93pnj66hzy9gch290q84b1cclhfd20yljvpy58ca5z4n"; depends=[ggplot2 httr ontoProc rjson S4Vectors shiny]; }; - polyester = derive2 { name="polyester"; version="1.24.0"; sha256="1l9gzycrdzdsiz2wlknr58yr4y0727kp4d62hrdn3c44zpq0vnd1"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; }; - powerTCR = derive2 { name="powerTCR"; version="1.8.0"; sha256="04cskpws1jxljnls986kkrihz6nbj77vmyapj34gdm6axbd2xapa"; depends=[cubature doParallel evmix foreach magrittr purrr tcR truncdist vegan VGAM]; }; - ppiStats = derive2 { name="ppiStats"; version="1.54.0"; sha256="1lirbzqpwsyyzbbz9cv2w7114np4gblwqhi7g0hn131ga8zglw9a"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; - pqsfinder = derive2 { name="pqsfinder"; version="2.4.0"; sha256="0yhl9zn70xnqipfsnl5qgzk94y24vvfwxlr4ifq6ajgglxr714ir"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; }; - prada = derive2 { name="prada"; version="1.63.0"; sha256="11vximc6r4swc98bqk309xi244k0kfk9a1706rfs4gvdmr1bd4xb"; depends=[Biobase BiocGenerics MASS RColorBrewer rrcov]; }; - pram = derive2 { name="pram"; version="1.4.0"; sha256="0brbfksh3hycvg9w5ghgx12gmwrf1byf1yfa2kx64wz4fbcb9whn"; depends=[BiocGenerics BiocParallel data_table GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; - prebs = derive2 { name="prebs"; version="1.28.0"; sha256="107pap3lmc9xm5c5n2gccf948vx31ws2azbp5k34w1vf1vrzmwkr"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; - predictionet = derive2 { name="predictionet"; version="1.34.0"; sha256="183kdzr12vgv118c4r14sk21chdirq5ynpp5k2pw7q7kgrpg20ix"; depends=[catnet igraph MASS penalized RBGL]; }; - preprocessCore = derive2 { name="preprocessCore"; version="1.50.0"; sha256="0q1406kswylc8zn5k3wyd34p34pfzbhi1ggkfsh30zcjp6adbwjl"; depends=[]; }; - primirTSS = derive2 { name="primirTSS"; version="1.6.1"; sha256="1dvniz8jz332zbwld1ranbjvpl2ni2bdk3xidq3nr4nsx9hxz4x1"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg38 dplyr GenomicRanges GenomicScores Gviz IRanges JASPAR2018 phastCons100way_UCSC_hg38 purrr R_utils rtracklayer S4Vectors shiny stringr TFBSTools tibble tidyr]; }; - proBAMr = derive2 { name="proBAMr"; version="1.22.0"; sha256="0gqsx7r7mxrspy0m9kl2x8m50cawhdpdh6prlryrl1q60fdkwh5g"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; - proBatch = derive2 { name="proBatch"; version="1.4.0"; sha256="0708yxljs298jv7p0rhny57i9jm2dfvaxq61a0d7pipfba1d1i0i"; depends=[Biobase corrplot data_table dplyr ggfortify ggplot2 lazyeval lubridate magrittr pheatmap preprocessCore purrr pvca RColorBrewer reshape2 rlang scales sva tibble tidyr viridis wesanderson WGCNA]; }; - proDA = derive2 { name="proDA"; version="1.2.0"; sha256="02nzn7s7sglg4i9pg7fbwp20r7y1blhy19i95rcarcam5pi7zbbw"; depends=[BiocGenerics extraDistr S4Vectors SummarizedExperiment]; }; - proFIA = derive2 { name="proFIA"; version="1.14.0"; sha256="179qwyvfx4445hmzc9gcc9a7zd43rnh2zgbw575swihdpp9psk7s"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; }; - procoil = derive2 { name="procoil"; version="2.16.0"; sha256="1h07cdx0n2g82rd4bad27agyvh0xf1k47nsfsyg7k9lsazpp04ib"; depends=[Biostrings kebabs S4Vectors]; }; - profileScoreDist = derive2 { name="profileScoreDist"; version="1.16.0"; sha256="102w047mxwa94x3zamybqiigbwp6av5qxlvgqwnlri68z6bwm2x6"; depends=[BiocGenerics Rcpp]; }; - profileplyr = derive2 { name="profileplyr"; version="1.4.3"; sha256="05qsb567vss0wzcc48lmz4yw4zqv14nsx3d1m95n1dzazw8rqjlz"; depends=[BiocGenerics BiocParallel ChIPseeker circlize ComplexHeatmap dplyr EnrichedHeatmap GenomeInfoDb GenomicFeatures GenomicRanges IRanges magrittr org_Hs_eg_db org_Mm_eg_db pheatmap R_utils rGREAT rjson rtracklayer S4Vectors soGGi SummarizedExperiment tidyr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - progeny = derive2 { name="progeny"; version="1.10.0"; sha256="09rq3nf9zm7w9djmx8xc8j3win3597p2v36zqgkhgkjwq5rkjgsh"; depends=[Biobase dplyr ggplot2 ggrepel gridExtra tidyr]; }; - projectR = derive2 { name="projectR"; version="1.4.0"; sha256="1xn8kfxw6g1mq53yp8380p401lxwff6j0z5px6iq0ssajrl7md67"; depends=[cluster CoGAPS dplyr ggalluvial ggplot2 limma NMF RColorBrewer reshape2 ROCR scales viridis]; }; - proteinProfiles = derive2 { name="proteinProfiles"; version="1.28.0"; sha256="0qdax0xq0hw6im9f9ai8k230gin66vnba23i132d8mg0hlh4aic6"; depends=[]; }; - psichomics = derive2 { name="psichomics"; version="1.14.4"; sha256="11bbk8k29bppd0fx5piqm5h17451bvn1nmsvchaldnrm0wj4bcah"; depends=[AnnotationDbi AnnotationHub BiocFileCache cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma org_Hs_eg_db pairsD3 plyr R_utils Rcpp recount reshape2 Rfast shiny shinyBS shinyjs stringr SummarizedExperiment survival XML xtable]; }; - psygenet2r = derive2 { name="psygenet2r"; version="1.20.0"; sha256="1321yih217rqspfxi829p6ymdda10d1q0vk1vkn0dj5721c4p1sg"; depends=[BgeeDB Biobase BiocManager biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; }; - pulsedSilac = derive2 { name="pulsedSilac"; version="1.2.0"; sha256="13isv3ip1ia5z09sa3fydcf5736ymlm1d00iy0p5b8m38g7znryv"; depends=[cowplot ggplot2 ggridges MuMIn R_utils robustbase S4Vectors SummarizedExperiment taRifx UpSetR]; }; - puma = derive2 { name="puma"; version="3.30.0"; sha256="02qdjc64ad5h564p1q06fr5pj4dx0lwbk06kf73jlzv0xzsqzlym"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; - pvac = derive2 { name="pvac"; version="1.36.0"; sha256="1srp56jjihc3qi6ff35nl25hvdvwrjl431q0sbrk5fd8la085n0c"; depends=[affy Biobase]; }; - pvca = derive2 { name="pvca"; version="1.28.0"; sha256="1kxl8g3aj5c1d5knj84yxpj1yi3rpymg8gdg4605yrkvw6dkc7r9"; depends=[Biobase lme4 Matrix vsn]; }; - pwOmics = derive2 { name="pwOmics"; version="1.20.0"; sha256="0f45m1lx71hj8n1kgy7wqjvnc6dbm4a5sl20yyq5nhv05vq2i0mf"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; }; - pwrEWAS = derive2 { name="pwrEWAS"; version="1.2.0"; sha256="0cif7cb5x3a4pkq2v0wn0jjazxiq5rpr9yywf93y4k7kp4wsb0i4"; depends=[abind BiocManager CpGassoc doParallel doSNOW foreach genefilter ggplot2 limma pwrEWAS_data shiny shinyBS shinyWidgets truncnorm]; }; - qPLEXanalyzer = derive2 { name="qPLEXanalyzer"; version="1.6.0"; sha256="0ib991zzssncm6m9ylp9s9irqndxsh6529gggw3c53hwlnqrik1x"; depends=[assertthat Biobase BiocGenerics Biostrings dplyr GenomicRanges ggdendro ggplot2 IRanges limma magrittr MSnbase preprocessCore purrr RColorBrewer statmod stringr tibble tidyr]; }; - qckitfastq = derive2 { name="qckitfastq"; version="1.4.0"; sha256="1nc0lz7js6wb14sb059lcx09kyk54wid7hfwgclmw3vkahj108lm"; depends=[data_table dplyr ggplot2 magrittr Rcpp reshape2 rlang RSeqAn seqTools zlibbioc]; }; - qcmetrics = derive2 { name="qcmetrics"; version="1.26.0"; sha256="1m1qvdagl1hl5lj6z97kfsgcfmlq21iqg7vvwfllp6iynfq8m5ba"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; - qpcrNorm = derive2 { name="qpcrNorm"; version="1.46.0"; sha256="0gl6jh9fcmvi8czcf45y77smya8gjc4xrbwp8bxz1d9l7n7qsrzs"; depends=[affy Biobase limma]; }; - qpgraph = derive2 { name="qpgraph"; version="2.22.0"; sha256="04xq2qs2562ri5ynszx9idn0nnnpv73kjv37iaa2v9j7y8r2ri8p"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; - qrqc = derive2 { name="qrqc"; version="1.42.0"; sha256="19jy4sr3svvrz72lwf7l5qk5avg1jani0xwfm65rs8j8nx12g1bc"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rhtslib testthat xtable]; }; - qsea = derive2 { name="qsea"; version="1.14.0"; sha256="0357pkzqka0wqrzisywikyn05xczfvzlr0lv9i2cdc4h9w4476s2"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges KernSmooth limma MASS Rsamtools rtracklayer zoo]; }; - qsmooth = derive2 { name="qsmooth"; version="1.4.0"; sha256="0ywbxzd6safc1kql3r528ijyslwyl4b0rmyad6m7pg2mg9rb255y"; depends=[SummarizedExperiment sva]; }; - quantro = derive2 { name="quantro"; version="1.22.0"; sha256="0ap9cl5z79wg44mnagjsk8py3kngb4f0ddnx85cbnwqkvb769zbz"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; - quantsmooth = derive2 { name="quantsmooth"; version="1.54.0"; sha256="0gx6l4sn1xkf4q439iqhlrkggsy517vk0wv1ladff6ynfc9an9l5"; depends=[quantreg]; }; - qusage = derive2 { name="qusage"; version="2.22.0"; sha256="01nxzd2siyg1qaxingfr6a5nm75l9lxf0j3i78dkgb9zifd735xf"; depends=[Biobase emmeans fftw limma nlme]; }; - qvalue = derive2 { name="qvalue"; version="2.20.0"; sha256="1hndmdr9niagbr4ry0vbhffvjzjg9im27kdbn0sa774k6r5b4z3f"; depends=[ggplot2 reshape2]; }; - r3Cseq = derive2 { name="r3Cseq"; version="1.34.0"; sha256="0knanp59s6piwnv8yz5k1rqbw2csp6dvc1qx0n4qfc5b2cd14v2q"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; - rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.28.0"; sha256="1rx61mqycphw925dcdj3z697rmkky6m2xxr3dhk8shmr7cx4q06g"; depends=[data_table XML]; }; - rCGH = derive2 { name="rCGH"; version="1.18.0"; sha256="0jbka7v4jjznyy4m54jma9n0mvlscpfrbgzhbffr2i4wpjynpacx"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - rDGIdb = derive2 { name="rDGIdb"; version="1.14.0"; sha256="0qz0y0yfdi1zgpgc7fb59ql17i1x9snkaaxpxlmnblsqd7hnm1zn"; depends=[httr jsonlite]; }; - rGADEM = derive2 { name="rGADEM"; version="2.36.0"; sha256="14mflbwhhj9f3b05zdlsdjwxmpb120r23fy306qkvxjprdqn4sz8"; depends=[Biostrings BSgenome GenomicRanges IRanges seqLogo]; }; - rGREAT = derive2 { name="rGREAT"; version="1.20.0"; sha256="0n8dw9ibb2klsczcxvvinpi9l53w8cs436i0c8w2jmramayl593v"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; - rRDP = derive2 { name="rRDP"; version="1.22.0"; sha256="1cclfi3gxjszp11qq9v0smh2djzfqfay9pzmrpd4ljk27akccdnq"; depends=[Biostrings]; }; - rSWeeP = derive2 { name="rSWeeP"; version="1.0.0"; sha256="0sz2abgfh0cacb5q6rrp0m84vc8bw6c568135w226qmkq4r96n4f"; depends=[pracma]; }; - rScudo = derive2 { name="rScudo"; version="1.4.0"; sha256="1js8dv9aslnl8wd7xp5s2pkxbbsb5g124g2ckpliwfpiadzccs7z"; depends=[Biobase BiocGenerics igraph S4Vectors stringr SummarizedExperiment]; }; - rTANDEM = derive2 { name="rTANDEM"; version="1.27.0"; sha256="095nqny8nzh3400b4l2npgxy4jwg4vq3j6zircipyr7qz6qd61fs"; depends=[data_table Rcpp XML]; }; - rTRM = derive2 { name="rTRM"; version="1.26.0"; sha256="0ah6idnvxdyq9wq06ja6nkswl6prg0n3yfnbag4hnr9vz7dw1xbf"; depends=[AnnotationDbi DBI igraph RSQLite]; }; - rTRMui = derive2 { name="rTRMui"; version="1.26.0"; sha256="1bwqd31pp9b27r7ckw3ixm06vbajljby42d9w6fffl7sl464qbnf"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; - rWikiPathways = derive2 { name="rWikiPathways"; version="1.8.5"; sha256="08mrwmkd0lb9psp42c8252gg835q2ydyjw4mlaw9r8hq92hc0912"; depends=[data_table httr rjson tidyr XML]; }; - rain = derive2 { name="rain"; version="1.22.0"; sha256="1sgz52j08y35828rpb46iv25k62yw70bqw3qp5l9nj7kbkqrvjqw"; depends=[gmp multtest]; }; - rama = derive2 { name="rama"; version="1.62.0"; sha256="1cir9jp0ma4afj427n1k0w8g41mqglbswhmb3q3hsc9dg4skcl1x"; depends=[]; }; - ramwas = derive2 { name="ramwas"; version="1.12.0"; sha256="134lalqnqqphc13glh460za2anbcgysfd5dci9iyb7sykmil3cl4"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; }; - randPack = derive2 { name="randPack"; version="1.34.0"; sha256="1qvnk0bl3wkk23a3h50khjbbnf7yhcqc6sr7yf5nnill0d1rqk1h"; depends=[Biobase]; }; - randRotation = derive2 { name="randRotation"; version="1.0.0"; sha256="0maz3h4p7z08z6qifh3qkcj5nb92q2naa8hg71a2109qqbifl04r"; depends=[Rdpack]; }; - rbsurv = derive2 { name="rbsurv"; version="2.46.0"; sha256="13l4llcgic3z56vz1rf17k8v958193bj93dapapibjrj384mhfck"; depends=[Biobase survival]; }; - rcellminer = derive2 { name="rcellminer"; version="2.10.2"; sha256="0y6d6i0djc6slr5rg6dc0bw5aml03cc53h2x4xak2a6aaa8xajs1"; depends=[Biobase ggplot2 gplots rcellminerData shiny stringr]; }; - reb = derive2 { name="reb"; version="1.65.0"; sha256="0id6acnzaqahrn2gax8zy07hrk8dnpzbb7n8aki4qadggn2i7fl6"; depends=[Biobase idiogram]; }; - receptLoss = derive2 { name="receptLoss"; version="1.0.0"; sha256="0r74bfgjyikg9z7bnr933cc1s4x2jipam1ygx3wx86f5s39srvr3"; depends=[dplyr ggplot2 magrittr SummarizedExperiment tidyr]; }; - reconsi = derive2 { name="reconsi"; version="1.0.0"; sha256="1xzmzi22mrwslbar1clh253vyv3hv427dbb7rhjqn5z4vib6piz9"; depends=[ggplot2 KernSmooth MASS phyloseq reshape2]; }; - recount = derive2 { name="recount"; version="1.14.0"; sha256="1x5wyml3hmpgs32f97hikm8h0150nj66ai7ldqpsn600fx2qivy8"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; }; - recoup = derive2 { name="recoup"; version="1.16.0"; sha256="0wv5s62mmigkq9xj3rlz229g8m6x2n9zkjk3rimxb1izg0ix22m2"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomicAlignments GenomicRanges ggplot2 rtracklayer S4Vectors]; }; - regionReport = derive2 { name="regionReport"; version="1.22.0"; sha256="001j7b45gqc4shh4f71686zflj1z331vw0ll9z8gmgki5a0vdms9"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; - regioneR = derive2 { name="regioneR"; version="1.20.1"; sha256="0bzjwzj5mvb49wgvs3gd3jfpm7s0zfkca763i65i7m994lgvz33c"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; }; - regsplice = derive2 { name="regsplice"; version="1.14.0"; sha256="07fglqjm8zi64r4sp3hf7x4a86vblrbmv78km73lj6602nk3wqb7"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; }; - regutools = derive2 { name="regutools"; version="1.0.1"; sha256="1jwfxw5il4f4kdgkn3zi57fbf05ag51ab18k0mx50glmca8271r6"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings DBI GenomicRanges Gviz IRanges RCy3 RSQLite S4Vectors]; }; - restfulSE = derive2 { name="restfulSE"; version="1.10.0"; sha256="1hhng7i52jj0si1zxmkzk6zbafb92h7mxmvx86ky7lxj36gwqjzc"; depends=[AnnotationDbi AnnotationHub bigrquery Biobase DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client rlang S4Vectors SummarizedExperiment]; }; - rexposome = derive2 { name="rexposome"; version="1.10.0"; sha256="0wmhbr2qm2774ppgwbhc0m83bbfq9x0p7vljxl296hvqqnxbljkg"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr reshape2 S4Vectors scales scatterplot3d stringr]; }; - rfPred = derive2 { name="rfPred"; version="1.26.0"; sha256="1w2kwjqsvak271h82v96aqyrzilavz4ynnk5r5ldpyfi4all4lsz"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; - rfaRm = derive2 { name="rfaRm"; version="1.0.0"; sha256="0zrmb2accyr7naccnk2kp8fkg2zzwflx2knymgvv3gfmdysnq4bc"; depends=[Biostrings data_table httr magick rsvg stringi]; }; - rgsepd = derive2 { name="rgsepd"; version="1.20.2"; sha256="179dn7kc7frr87f03qjkm7vxj3licn7mrq9yvagzfjm7pnqzr5ps"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; }; - rhdf5 = derive2 { name="rhdf5"; version="2.32.4"; sha256="1qlgqn68xki82qm4i07h1z8c59dnjw29mravds9kby8419ra19gq"; depends=[Rhdf5lib]; }; - rhdf5client = derive2 { name="rhdf5client"; version="1.10.0"; sha256="0l49i56dnvabls011rd8yiqv6qkf8iszwq5afirzcs3fs2acb6iz"; depends=[DelayedArray httr R6 rjson S4Vectors]; }; - rhdf5filters = derive2 { name="rhdf5filters"; version="1.0.1"; sha256="06lp7phfz1asvppgm6sx9ix5w4wh8qz2dvklz1k0rvzrli5mb7pp"; depends=[Rhdf5lib]; }; - riboSeqR = derive2 { name="riboSeqR"; version="1.22.0"; sha256="04a4dkmacd6xy55m84amxa0fspbc4kgg9r9k7bc3wrxswk77ccxk"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools seqLogo]; }; - ribor = derive2 { name="ribor"; version="1.0.0"; sha256="1650shz9iqp1zvlj73jkgq9dryxfd8v337fmg0v8f0b7y1vb0jbh"; depends=[dplyr ggplot2 hash rhdf5 rlang S4Vectors tidyr yaml]; }; - ribosomeProfilingQC = derive2 { name="ribosomeProfilingQC"; version="1.0.6"; sha256="0fkc0bf1ab6avxx762v3rn5hgbzavdf48wlg3hbyqk7dcv4firp2"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome cluster EDASeq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfittext ggplot2 ggrepel IRanges motifStack Rsamtools Rsubread rtracklayer RUVSeq S4Vectors scales XVector]; }; - rmelting = derive2 { name="rmelting"; version="1.4.0"; sha256="1pj3n330q5anbg1pazlvgx0ndj0hxc00h0ajqpcwzxmdgnaq6qgd"; depends=[Rdpack rJava]; }; - rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.46.0"; sha256="17s1ad22zj09cklqxnccb3c4x75vgv01da5y7r1c08g6cvzv456a"; depends=[Biobase DBI DESeq edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; }; - rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.18.0"; sha256="1cqfx6fwkpbx7c31dhq6j0ijll39y90r54a1bnhxg2q0m4fba2a7"; depends=[RColorBrewer]; }; - roar = derive2 { name="roar"; version="1.24.0"; sha256="069g887migvk70n0377dqr0fk7wjbz3w0asgk42bwhp8xpjfym6f"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; }; - rols = derive2 { name="rols"; version="2.16.4"; sha256="1zbj2m1xnbpw5wlpa2v6c7z72hsy4r5k1gdfvh0f7yv9nppxy1r8"; depends=[Biobase BiocGenerics httr jsonlite progress]; }; - ropls = derive2 { name="ropls"; version="1.20.0"; sha256="1drww1mr0nira3qplyga6s3mljpjxshjgbn524kzxi0nrfbcvmnx"; depends=[Biobase MultiDataSet]; }; - rpx = derive2 { name="rpx"; version="1.24.0"; sha256="1m9n19dj4wvnx31m3hlpw4pf55rw1wvh5s7fwsh4xil4c4h236m8"; depends=[RCurl xml2]; }; - rqt = derive2 { name="rqt"; version="1.14.0"; sha256="0hv1hhmnk6qbilwbg6978mljk9cssz1ma1ri3qqmq9wdn6z6bxjl"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; }; - rqubic = derive2 { name="rqubic"; version="1.34.0"; sha256="1n1xdkgcynlawp0gl12fbynrxzjf5rpxa9i8ywc9dbl5q7dg7082"; depends=[biclust Biobase BiocGenerics]; }; - rrvgo = derive2 { name="rrvgo"; version="1.0.2"; sha256="0v6skch7wgncbzqqzzwph0c37l7yh245i09j4p2nszjkx8c7kgj7"; depends=[AnnotationDbi ggplot2 ggrepel GO_db GOSemSim pheatmap shiny tm treemap wordcloud]; }; - rsbml = derive2 { name="rsbml"; version="2.46.0"; sha256="1i1izznnwzrc6m7s3hblfff466icfvxl2gjdqaln8qfg9v87rslx"; depends=[BiocGenerics graph]; }; - rtracklayer = derive2 { name="rtracklayer"; version="1.48.0"; sha256="1zcgk92sidhy4y7ws9ms4nkkh2hnccfhfh53qgna0kma9jy4v5xf"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; - runibic = derive2 { name="runibic"; version="1.10.0"; sha256="1x3a710pxa0slw51267r6hrx7048mv3qfj7brdp27n8wyrrfih8w"; depends=[biclust Rcpp SummarizedExperiment testthat]; }; - sRACIPE = derive2 { name="sRACIPE"; version="1.4.0"; sha256="1p9np0ah7sfdwd519csia3clf7zfgsz4xggn83h4spswf0q1zd4g"; depends=[BiocGenerics ggplot2 gplots gridExtra htmlwidgets MASS RColorBrewer Rcpp reshape2 S4Vectors SummarizedExperiment umap visNetwork]; }; - sRAP = derive2 { name="sRAP"; version="1.27.0"; sha256="194ff277hpp717vvs6z5qksl747g6k5y6g8agbh3cl43vkyysapd"; depends=[gplots pls qvalue ROCR WriteXLS]; }; - sSeq = derive2 { name="sSeq"; version="1.26.0"; sha256="1kdwv93qsmsy1ky2bdg2jslc74fv3awx7f35cppdnixgwcafv3jp"; depends=[caTools RColorBrewer]; }; - safe = derive2 { name="safe"; version="3.28.1"; sha256="149zi9vs2sbwm0q75h3k48fvxb4kbjklfl1g5wvjsqami363gpjw"; depends=[AnnotationDbi Biobase SparseM]; }; - sagenhaft = derive2 { name="sagenhaft"; version="1.58.0"; sha256="1x550al1xgihv6my5f0dmmr3c5j6g4xg76hrsmil2lf0y9dbi0yx"; depends=[SparseM]; }; - samExploreR = derive2 { name="samExploreR"; version="1.12.0"; sha256="11fqvgnz4wy5nrxvci19g2ydd4s3ld3nglg3kiba75i3nznrn1ny"; depends=[edgeR ggplot2 RNAseqData_HNRNPC_bam_chr14 Rsubread]; }; - sampleClassifier = derive2 { name="sampleClassifier"; version="1.11.0"; sha256="1dv0g8xcrb2br10fhhmprx4p6zwbm945m2nms757ap9py8rzv1sy"; depends=[annotate e1071 ggplot2 MGFM MGFR]; }; - sangerseqR = derive2 { name="sangerseqR"; version="1.24.0"; sha256="0chvxqnriaxvfr68r93wmgflcbrfb7maz0pdv4h3ppzazn0j0663"; depends=[Biostrings shiny]; }; - sapFinder = derive2 { name="sapFinder"; version="1.26.0"; sha256="1d55bgjwmz8ncphdg1bzjgsc5vk1n5r36vbazkdm9ra500rr90pq"; depends=[pheatmap Rcpp rTANDEM]; }; - sarks = derive2 { name="sarks"; version="1.0.0"; sha256="0r949f972h7995k42mc675an5r2gd71mbaicbbdvnpjaq3m6qrc4"; depends=[binom Biostrings cluster IRanges rJava]; }; - savR = derive2 { name="savR"; version="1.26.0"; sha256="17jdnr47ivblfspr4b32z9fds1fqiiwsi2z6r524g1v4944p8w5a"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; - scAlign = derive2 { name="scAlign"; version="1.3.0"; sha256="0br9s8i9893pdlpgrail5sp17yzy8sl2m5liaa7m0ipammr96l5m"; depends=[FNN ggplot2 irlba PMA purrr Rtsne Seurat SingleCellExperiment tensorflow]; }; - scBFA = derive2 { name="scBFA"; version="1.2.0"; sha256="0l9s0dj5gkzplcb7ha6csqbgnbhki4zkq6j5kc5dzg6rmnir14ph"; depends=[copula DESeq2 ggplot2 MASS Matrix Seurat SingleCellExperiment SummarizedExperiment zinbwave]; }; - scClassify = derive2 { name="scClassify"; version="1.0.0"; sha256="1r91xcws7wj11q86ifi0rw7m7m7zhxj5z942i0qn0zixahn89ff3"; depends=[BiocParallel cluster diptest ggplot2 ggraph hopach igraph limma Matrix mgcv minpack_lm mixtools proxy proxyC S4Vectors statmod]; }; - scDD = derive2 { name="scDD"; version="1.12.0"; sha256="19q01jksxpv4p26wp2c6faa4fffkjnqlbcds2x955pk35jkqknxx"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; }; - scDblFinder = derive2 { name="scDblFinder"; version="1.2.0"; sha256="0znjxbcdq4i6b8fzsfx3ia0ah2m9pr0kbq3fmilpf7q033zxl7ph"; depends=[BiocNeighbors BiocParallel BiocSingular data_table DelayedArray dplyr ggplot2 igraph Matrix matrixStats randomForest scater scran SingleCellExperiment SummarizedExperiment]; }; - scFeatureFilter = derive2 { name="scFeatureFilter"; version="1.8.0"; sha256="1mgpp678xsqn0agsffhpmj7mbca30yqfnb3v3fbxw9dz07zj08hy"; depends=[dplyr ggplot2 magrittr rlang tibble]; }; - scGPS = derive2 { name="scGPS"; version="1.2.0"; sha256="0wkx9cbwwqggi8alpkj6b3fi098iyj84zyarn29ia74jczisyzxv"; depends=[caret DESeq dplyr dynamicTreeCut fastcluster ggplot2 glmnet locfit Rcpp RcppArmadillo RcppParallel SingleCellExperiment SummarizedExperiment]; }; - scHOT = derive2 { name="scHOT"; version="1.0.0"; sha256="0hddblxzghp7br2vgn7xlqbyh1fsbkcs2w59p86msgm8xqj9fzf7"; depends=[BiocParallel ggforce ggplot2 igraph IRanges Matrix reshape S4Vectors SingleCellExperiment SummarizedExperiment]; }; - scMAGeCK = derive2 { name="scMAGeCK"; version="1.0.0"; sha256="1diwmgr0jm18wkmk50nj0cmw0s77qwfk1amsbimrxw73j4sdphpm"; depends=[Seurat]; }; - scMerge = derive2 { name="scMerge"; version="1.4.0"; sha256="1kikd6bc2h9iz2gvil2awzrxnx68x88mhcbhwysfn70y6br5ckah"; depends=[BiocParallel BiocSingular cluster DelayedArray DelayedMatrixStats distr dplyr igraph M3Drop pdist proxy Rcpp RcppEigen ruv S4Vectors SingleCellExperiment SummarizedExperiment testthat]; }; - scPCA = derive2 { name="scPCA"; version="1.2.0"; sha256="1ihc1mhbzzmvv1md1axam01k1jc9z7c8psaw8pkd29wly35jpcgi"; depends=[assertthat BiocParallel cluster dplyr elasticnet kernlab matrixStats origami purrr Rdpack sparsepca stringr tibble]; }; - scPipe = derive2 { name="scPipe"; version="1.10.0"; sha256="1fqszps83j0w7r7y8z4h127m1shq6rj7d5yfs6gssva9anf2ff9m"; depends=[AnnotationDbi BiocGenerics biomaRt dplyr GenomicRanges GGally ggplot2 glue hash magrittr MASS mclust org_Hs_eg_db org_Mm_eg_db Rcpp reshape Rhtslib rlang robustbase rtracklayer S4Vectors scales scater SingleCellExperiment stringr SummarizedExperiment testthat zlibbioc]; }; - scRecover = derive2 { name="scRecover"; version="1.4.1"; sha256="1q4r75hzcb9xv4d4vj4f6ks58q887xn5rik1v7cc8imvpg329j5i"; depends=[bbmle BiocParallel doParallel foreach gamlss kernlab MASS Matrix penalized preseqR pscl Rmagic rsvd SAVER]; }; - scTGIF = derive2 { name="scTGIF"; version="1.2.2"; sha256="03iqjs6pvy4hnxn50nd7558lqsygv7il8pbmsl71wrh73m50rv45"; depends=[Biobase BiocStyle ggplot2 GSEABase igraph knitr msigdbr nnTensor plotly RColorBrewer Rcpp rmarkdown S4Vectors scales schex SingleCellExperiment SummarizedExperiment tagcloud tibble]; }; - scTHI = derive2 { name="scTHI"; version="1.0.0"; sha256="19rrc0nwy03dmhvbbalys6wwapzj6yp59m4y134p830vd5ah696z"; depends=[BiocParallel Rtsne]; }; - scTensor = derive2 { name="scTensor"; version="1.4.3"; sha256="024hivjpxvjdsjh7zkkr422b3bpqi0kgy4nnny5wkkhpn0aimwlq"; depends=[abind AnnotationDbi AnnotationHub BiocManager BiocStyle Category checkmate crayon DOSE ggplot2 GOstats heatmaply igraph knitr MeSHDbi meshr nnTensor outliers plotly plotrix reactome_db ReactomePA rmarkdown RSQLite rTensor S4Vectors schex SingleCellExperiment SummarizedExperiment tagcloud visNetwork]; }; - scater = derive2 { name="scater"; version="1.16.2"; sha256="1pa5wvgjb30rw1vsjwbnn07ss3sc5n8ck5d7khdby4r2s9177s33"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats ggbeeswarm ggplot2 Matrix Rcpp rlang S4Vectors SingleCellExperiment SummarizedExperiment viridis]; }; - scde = derive2 { name="scde"; version="2.16.0"; sha256="15v4h3j66aqgpd96bswb0fa9f9gqgas6mw104643k7p58vgpw1gj"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; }; - scds = derive2 { name="scds"; version="1.4.0"; sha256="18654rrxdislwqkqi431chkr3hijjn8jarb3yzyl0sl5dippbwi7"; depends=[dplyr Matrix pROC S4Vectors SingleCellExperiment SummarizedExperiment xgboost]; }; - scfind = derive2 { name="scfind"; version="1.9.0"; sha256="12sjy9gr6cgms69yrskcs67m0r16ird7ggbn9zh8ghpdnn9dwy2s"; depends=[bit dplyr hash Rcpp reshape2 SingleCellExperiment SummarizedExperiment]; }; - schex = derive2 { name="schex"; version="1.2.0"; sha256="03634vg0q4jxai5hlfcfvi41w7l4xfb1mkh1ghl7vjcazyjw56ck"; depends=[cluster concaveman dplyr entropy ggforce ggplot2 hexbin scales Seurat shiny SingleCellExperiment]; }; - scmap = derive2 { name="scmap"; version="1.10.0"; sha256="1vxln9dq3alqr0pqjc67m8n0536s4iz7zh0nc11v03469d0hbznx"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; - scmeth = derive2 { name="scmeth"; version="1.8.0"; sha256="19ppdsw379xb0wm7fn788vn7cvmjkqf3p4jkh85z3iz9ik2g7vaq"; depends=[AnnotationHub annotatr Biostrings BSgenome bsseq DelayedArray DT GenomeInfoDb GenomicRanges HDF5Array knitr reshape2 rmarkdown SummarizedExperiment]; }; - scone = derive2 { name="scone"; version="1.12.0"; sha256="12hcmbpncm0l1yxhm3sgkqqfri7s5qc46ikv5qcj8pw5a42rkx3g"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SummarizedExperiment]; }; - scoreInvHap = derive2 { name="scoreInvHap"; version="1.10.0"; sha256="0fvi85m5ca25jag42603ca80ymbgl3n67jj48v43lr82jxaip5p1"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; }; - scran = derive2 { name="scran"; version="1.16.0"; sha256="1gm4ys4aq8h1pn45k1rxk384wjyf55izivw8kgxbrflj6j4xvvsv"; depends=[beachmat BH BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats dqrng edgeR igraph IRanges limma Matrix Rcpp S4Vectors scater SingleCellExperiment statmod SummarizedExperiment]; }; - scruff = derive2 { name="scruff"; version="1.6.0"; sha256="1fy7a0g2sxlq3wf0adysrjw71wxp9zvycqkzd0xf01garrpaxz2k"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 ggthemes plyr Rsamtools Rsubread rtracklayer S4Vectors scales ShortRead SingleCellExperiment stringdist SummarizedExperiment]; }; - scry = derive2 { name="scry"; version="1.0.1"; sha256="1dmf5mncwda5ikc54hkbl45rq7zqxdnr7zpxg8452km9dcxiw8wh"; depends=[glmpca Matrix SingleCellExperiment SummarizedExperiment]; }; - scsR = derive2 { name="scsR"; version="1.23.0"; sha256="0likrrwlfnrsmyd5qvh2dhfl5xb4401g3q42x4xfbhgwfzjcnwb2"; depends=[BiocGenerics Biostrings ggplot2 hash IRanges plyr RColorBrewer sqldf STRINGdb]; }; - segmentSeq = derive2 { name="segmentSeq"; version="2.22.0"; sha256="0wgjnvri5663829n0p7bnymj6pwh7wnxf0frn4mprwncm01xnvbq"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; - selectKSigs = derive2 { name="selectKSigs"; version="1.0.0"; sha256="0mai34jfhgfr4kdw8m0ffy90517mw83qzbxv62dxgplvj1rmgpjn"; depends=[gtools HiLDA magrittr Rcpp]; }; - semisup = derive2 { name="semisup"; version="1.12.4"; sha256="10vr15ijrlfjd3vy8pk798hifwwald3vdlgpymp4881gsr4wcssd"; depends=[VGAM]; }; - seq2pathway = derive2 { name="seq2pathway"; version="1.20.0"; sha256="1j7zh9283m9y6wf57211cnl5jjwf5x1qn3y6590nsarli265dgbr"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; - seqCAT = derive2 { name="seqCAT"; version="1.10.0"; sha256="0fz4nyk4jcvl5g5k9s851yc3sn4mq5q200k1l06dwds6dfxyiac5"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges rlang rtracklayer S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; }; - seqCNA = derive2 { name="seqCNA"; version="1.34.0"; sha256="0h3wcq0d1bhlsl4dz4zhi942hjxisjjsjp5jkrg6272w8m0pllsk"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; - seqLogo = derive2 { name="seqLogo"; version="1.54.3"; sha256="09kkxir305fv8z2yyihvspkrzclxbw1cx5mvhfkrhl10rap6662j"; depends=[]; }; - seqPattern = derive2 { name="seqPattern"; version="1.20.0"; sha256="0f1yvx2ri1557rzjx08q5bgml1cvkm8hjl8xn1qi4rjs64sy6mci"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; - seqTools = derive2 { name="seqTools"; version="1.22.0"; sha256="09gq3g5ngf91pp8ljqh2njc7mnb3jgnjqdgh6vwabx6x3k4pjvdx"; depends=[zlibbioc]; }; - seqbias = derive2 { name="seqbias"; version="1.36.0"; sha256="0sy2fv98x4qfz9llns28jh1n4bi991jj856y8a5fbzpx7y990lai"; depends=[Biostrings GenomicRanges Rhtslib]; }; - seqcombo = derive2 { name="seqcombo"; version="1.10.0"; sha256="0lgcnfzynz2h48d14gqkj146g51m11pccl8q6f1kaq4i8mrka6dz"; depends=[Biostrings cowplot dplyr ggplot2 igraph magrittr rvcheck]; }; - seqplots = derive2 { name="seqplots"; version="1.26.0"; sha256="0br20jw52p7jjqr7kidwv340kxidl3mnbpnd4kswq4xlnfi3gakz"; depends=[BiocManager Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 Rsamtools RSQLite rtracklayer S4Vectors shiny]; }; - seqsetvis = derive2 { name="seqsetvis"; version="1.8.0"; sha256="0hxfh1fx530s3z6zh6axny3kr1lrzj7y47rn1l8p3k1sdhlhccqq"; depends=[data_table eulerr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma pbapply png RColorBrewer Rsamtools rtracklayer S4Vectors]; }; - sesame = derive2 { name="sesame"; version="1.6.0"; sha256="0656k1cv15jvip6ppjqzmic0rf7hlgddrcbqjyxvz2d6730yd68g"; depends=[BiocParallel DNAcopy GenomicRanges ggplot2 HDF5Array illuminaio IRanges MASS matrixStats preprocessCore randomForest S4Vectors sesameData SummarizedExperiment wheatmap]; }; - sevenC = derive2 { name="sevenC"; version="1.8.0"; sha256="0b3nxw2333amlqnqv9xqqpf3by4l26rwzbmsy1y4fi9v4j7np3qc"; depends=[BiocGenerics boot data_table GenomeInfoDb GenomicRanges InteractionSet IRanges purrr readr rtracklayer S4Vectors]; }; - sevenbridges = derive2 { name="sevenbridges"; version="1.18.1"; sha256="1dm57fpgl1xf9mjrz32jlmasilfwa29kfbvq3kbxjd4chhm4kih9"; depends=[curl data_table docopt httr jsonlite objectProperties S4Vectors stringr uuid yaml]; }; - shinyMethyl = derive2 { name="shinyMethyl"; version="1.24.0"; sha256="1j7msbb3ldqx60wx2g4qckycwyg4j7cnpj8lmqd5867a0fpi41xk"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; - shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.26.0"; sha256="06hkpdgdbydxyhcgg95zhanwq3vab039x9zgmhbjlr9aaxpqng59"; depends=[mixtools rTANDEM shiny xtable]; }; - sigFeature = derive2 { name="sigFeature"; version="1.6.0"; sha256="1sdwvzxlxfiqybnc4nbdsvss8mj8kbmp9jca1v293gqidixwfk5n"; depends=[BiocParallel biocViews e1071 Matrix nlme openxlsx pheatmap RColorBrewer SparseM SummarizedExperiment]; }; - sigPathway = derive2 { name="sigPathway"; version="1.56.0"; sha256="0a79sdvag80p7xcdz8mp8wiby36yxmappzycfd2rp36v9drjk0h5"; depends=[]; }; - sigaR = derive2 { name="sigaR"; version="1.35.0"; sha256="05cmjdd7brmmshlam940qhpj1wzk7a4j86hqp3i5rwcqljc7qhzf"; depends=[Biobase CGHbase corpcor igraph limma marray MASS mvtnorm penalized quadprog snowfall]; }; - siggenes = derive2 { name="siggenes"; version="1.62.0"; sha256="0i4y1hgq1ljxkf6sypb6c8yp412a8q5v5z68cx1zrgxnccvp0mfy"; depends=[Biobase multtest scrime]; }; - sights = derive2 { name="sights"; version="1.14.0"; sha256="1m71q14hwqlyrisgsl8j93rl4z2qkya531pzsajq70n2x87ghjxy"; depends=[ggplot2 lattice MASS qvalue reshape2]; }; - signatureSearch = derive2 { name="signatureSearch"; version="1.2.5"; sha256="1fwx8xhv7c9hxhb2ny0niyj89rsd51vfdvzni0cx8pj7l6vpssg6"; depends=[AnnotationDbi BiocParallel clusterProfiler data_table DelayedArray DOSE dplyr ExperimentHub fastmatch fgsea ggplot2 GSEABase HDF5Array magrittr Matrix qvalue Rcpp readr reshape2 rhdf5 RSQLite scales SummarizedExperiment visNetwork]; }; - signeR = derive2 { name="signeR"; version="1.14.0"; sha256="1mjnh1vxqx0mld10m5plsnml1c30j534nbwqiyxcv2habchkdfnf"; depends=[BiocGenerics Biostrings class GenomeInfoDb GenomicRanges IRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; }; - signet = derive2 { name="signet"; version="1.7.0"; sha256="1qq3hnawaslqv2fp5dc5c552r430kmxhf0b0qwzny8ms9g83azf5"; depends=[graph igraph RBGL]; }; - sigsquared = derive2 { name="sigsquared"; version="1.20.0"; sha256="1mgg4gg5h0ms6srbib8am1i8l9k0vcxj99j7i90h72pmdipwmy4a"; depends=[Biobase survival]; }; - similaRpeak = derive2 { name="similaRpeak"; version="1.20.0"; sha256="02nhbwf0xck8inn49hnhk629f5jbh3ian069nif7hvi6pxg5l8bx"; depends=[R6]; }; - simpleaffy = derive2 { name="simpleaffy"; version="2.64.0"; sha256="040043spblr8v67lkn3nnxhgfmfh2iwaizph4fnms1ik6qz662x7"; depends=[affy Biobase BiocGenerics gcrma genefilter]; }; - simulatorZ = derive2 { name="simulatorZ"; version="1.22.0"; sha256="1i8bp08bs129d9crj7hhqabb2di72zwcl27v58a0vzbnwkf1m0fd"; depends=[Biobase BiocGenerics gbm GenomicRanges Hmisc SummarizedExperiment survival]; }; - sincell = derive2 { name="sincell"; version="1.20.0"; sha256="1byzikl2c0w25ni9djksdzqsvlxdm0n03lc476qafai46vk7jzr6"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; - singleCellTK = derive2 { name="singleCellTK"; version="1.8.0"; sha256="069p7nh2lkdy8kb7rdp6zqjjyjbsbvycf8zfcvbxr7fmxyvnks2r"; depends=[AnnotationDbi ape Biobase celda circlize cluster colourpicker ComplexHeatmap data_table DelayedArray DESeq2 DT enrichR ggplot2 ggtree gridExtra GSVA GSVAdata limma MAST matrixStats multtest plotly RColorBrewer reshape2 Rtsne S4Vectors shiny shinyalert shinyBS shinycssloaders shinyjs shinythemes SingleCellExperiment SummarizedExperiment sva umap]; }; - singscore = derive2 { name="singscore"; version="1.8.0"; sha256="134ycza15x82g7f039fd6qyq2gwzvwq1jx9wya3qpi13lbfazicw"; depends=[Biobase BiocParallel edgeR ggplot2 ggrepel GSEABase magrittr matrixStats plotly plyr RColorBrewer reshape reshape2 S4Vectors SummarizedExperiment tidyr]; }; - sitePath = derive2 { name="sitePath"; version="1.4.2"; sha256="1n40w5v3j7wn8p3wagy5n21x10hk1fbnii7vr47ws2p5cxw0ilrd"; depends=[ape Rcpp seqinr]; }; - sizepower = derive2 { name="sizepower"; version="1.58.0"; sha256="0ql63mp2d3gx9j8i9f2bj20l2ibxzapnwawkrwxcs2bd5l7s622w"; depends=[]; }; - skewr = derive2 { name="skewr"; version="1.20.0"; sha256="1lrlx21ia0jk22nnqc2hjp7dqnymvlmvx932s4r34rszwwli6dc8"; depends=[IlluminaHumanMethylation450kmanifest methylumi minfi mixsmsn RColorBrewer S4Vectors wateRmelon]; }; - slalom = derive2 { name="slalom"; version="1.10.0"; sha256="0r99mca6vyvcz1izpicdmbahdvzwbpjlfna1xlvmzzcp4rj0y9fs"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; }; - slingshot = derive2 { name="slingshot"; version="1.6.1"; sha256="0gh91fkikw7y22sb00yvbjjssr64f4swikcz2ydri84c4jv8nvqa"; depends=[ape igraph matrixStats princurve SingleCellExperiment SummarizedExperiment]; }; - slinky = derive2 { name="slinky"; version="1.6.0"; sha256="12mcla3xlj0qn9kv4y734khn6vsrkcv7gkm27vm3b2xhdvipv0q7"; depends=[curl dplyr foreach httr jsonlite readr rhdf5 SummarizedExperiment tidyr]; }; - snapCGH = derive2 { name="snapCGH"; version="1.58.0"; sha256="19b61szwki5jn6k9979h43bwqhrhlj7b3kvv71hpws6rqxvjfal8"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; - snapcount = derive2 { name="snapcount"; version="1.0.0"; sha256="0zrdg53gs4aqw1bq4qwmg3zc98nwp3h74a45vhbsd88x1lysyxrr"; depends=[assertthat data_table GenomicRanges httr IRanges jsonlite magrittr Matrix purrr R6 rlang stringr SummarizedExperiment]; }; - snm = derive2 { name="snm"; version="1.36.0"; sha256="11kqzc9zwgzys3ni9fl4lq0cmik8zbzzf32i82q1yl6vn5kccvsy"; depends=[corpcor lme4]; }; - snpStats = derive2 { name="snpStats"; version="1.38.0"; sha256="1qv3nqqr30d3n66mawqd9dbl95dl89r4bcjvkc5iassy1yrwr8wq"; depends=[BiocGenerics Matrix survival zlibbioc]; }; - soGGi = derive2 { name="soGGi"; version="1.20.0"; sha256="173xdwbj3ywm0w7kfz47whlx9ankk6lkmkp2hw9lmblaqhaa8v0j"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - sojourner = derive2 { name="sojourner"; version="1.2.1"; sha256="0sda3mb8r6s5s4c1ha9570n29ls76x57wvyq8nclrys7x0v325gi"; depends=[dplyr EBImage fitdistrplus ggplot2 gridExtra lattice MASS mclust minpack_lm mixtools mltools nls2 pixmap plyr R_matlab Rcpp reshape2 rlang rtiff sampSurf scales shiny shinyjs sp truncnorm]; }; - sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.12.0"; sha256="0fckk5iy4masrc0kyw666mrz8mdzvmpn9akk9fr4qa63shxxgfaq"; depends=[MASS MCMCpack optparse tmvtnorm]; }; - sparseMatrixStats = derive2 { name="sparseMatrixStats"; version="1.0.5"; sha256="1jjf467q3minqc01rvmm8phkpas61k63c18iqzdrngdy9yj6kb2z"; depends=[Matrix MatrixGenerics matrixStats Rcpp]; }; - sparsenetgls = derive2 { name="sparsenetgls"; version="1.6.1"; sha256="0s7qhr49j1q0iisnjc5c88v1vnvnw0hpydfgsmsl01pmhwzmzvmp"; depends=[glmnet huge MASS Matrix]; }; - specL = derive2 { name="specL"; version="1.22.0"; sha256="1h0lfbqx1qsqvrwhhh16s52g1wlr9c2pkb26wbrlb3nar2514x66"; depends=[DBI protViz RSQLite seqinr]; }; - spicyR = derive2 { name="spicyR"; version="1.0.1"; sha256="1dqnf39pw0d6fbxl5sz5r9zi5ns3bj0003jhm4ipckp5h4kiydqq"; depends=[BiocGenerics BiocParallel class concaveman ggplot2 IRanges lme4 lmerTest mgcv pheatmap purrr rlang S4Vectors spatstat]; }; - spikeLI = derive2 { name="spikeLI"; version="2.48.0"; sha256="0s9qm44n8m03vwl66zmjhq0hpcvm8j7a9xqag7ig8kwv5n6rhzsr"; depends=[]; }; - spkTools = derive2 { name="spkTools"; version="1.44.0"; sha256="0kjkxmcqffppkx64nzrj6x45pcard9wggclz8hgsvnhid3dkmj5s"; depends=[Biobase gtools RColorBrewer]; }; - splatter = derive2 { name="splatter"; version="1.12.0"; sha256="08p7pf6abz0110vv8pi6g5b3yhfv9fgqjm05gbl9vk29a0gyb5d3"; depends=[akima BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus ggplot2 locfit matrixStats S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; }; - splineTimeR = derive2 { name="splineTimeR"; version="1.16.0"; sha256="08rb0ss66bg28ggsav35bkd7sfaz18kd320bbdsd44l4v2b4vp1b"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; - splots = derive2 { name="splots"; version="1.54.0"; sha256="16a18m8q04avv46wn75pz1vkfpschhs0j1gfvmdl6dd29r82d9r4"; depends=[RColorBrewer]; }; - spotSegmentation = derive2 { name="spotSegmentation"; version="1.61.0"; sha256="1fsz8xqxrc000jj1mn59ip3lx558j0589snyxvb9kkkhbc253n6c"; depends=[mclust]; }; - spqn = derive2 { name="spqn"; version="1.0.0"; sha256="14z5dyi8wl03f4sc56d03z72nhyzgf7dcxq7ap5s2ch961ifyycp"; depends=[BiocGenerics ggplot2 ggridges matrixStats SummarizedExperiment]; }; - srnadiff = derive2 { name="srnadiff"; version="1.8.2"; sha256="1fsb2p44iyz0xhgvj6qmpssmynm1l22q8ccfb9rd95dh2p2pc0kl"; depends=[BiocManager BiocParallel BiocStyle DESeq2 devtools GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - ssPATHS = derive2 { name="ssPATHS"; version="1.2.0"; sha256="0n6safqhsw8490vpy1xvagx9m1am4l9y0plkq4ldds4m92g6p432"; depends=[dml MESS ROCR SummarizedExperiment]; }; - sscore = derive2 { name="sscore"; version="1.60.0"; sha256="141jwdaj5kww1fb0vv6m36ai1irz4z2gqb4xzl1hvch42m5ryfkl"; depends=[affy affyio]; }; - sscu = derive2 { name="sscu"; version="2.18.0"; sha256="13avxlg06r3xmirb6hgya4m5sgza66agxfm5x9y2xc93azww28js"; depends=[BiocGenerics Biostrings seqinr]; }; - ssize = derive2 { name="ssize"; version="1.62.0"; sha256="1v1fdck6par773anvbj4cqx6bkdkqcq726r928g035yhr1b7qj8k"; depends=[gdata xtable]; }; - ssrch = derive2 { name="ssrch"; version="1.4.0"; sha256="101bvpyh5mi3kq1ch0qb79pxj5mfvqb5n51mw6ylzzqdrsfq2m2y"; depends=[DT shiny]; }; - ssviz = derive2 { name="ssviz"; version="1.22.0"; sha256="0c4l2xsxikf11hd16wq670g9z7zmsqgx4ns0izpgp31m534c64i2"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; - staRank = derive2 { name="staRank"; version="1.30.0"; sha256="0nglf9qqc8ckfn7r4wbaghbr07qapjai7yx0bbl92ishwfdg2r6x"; depends=[cellHTS2]; }; - stageR = derive2 { name="stageR"; version="1.10.0"; sha256="0grmb78ihwwvi238x73bysjcbvrfynpbl8b1jrsb8v573xvixhrl"; depends=[SummarizedExperiment]; }; - statTarget = derive2 { name="statTarget"; version="1.18.0"; sha256="015xyiys56ni9zzfc67drhzr1mnyd1vrijz0fg6dkqsiyz1qpvjg"; depends=[impute pdist pls plyr randomForest ROC rrcov]; }; - stepNorm = derive2 { name="stepNorm"; version="1.60.0"; sha256="0xc7lkr9sddhpd8gmd0blsxm1ldw3h8lmxsfnf3w4gvliwir1zpr"; depends=[marray MASS]; }; - strandCheckR = derive2 { name="strandCheckR"; version="1.6.0"; sha256="0w31b3amcz7d4zqxcckznpqwz61vxbfdiacamlzwghjap7hcqvi9"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges magrittr reshape2 Rsamtools S4Vectors stringr TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - struct = derive2 { name="struct"; version="1.0.0"; sha256="1bf7gm0gld6sl2p2gjqg7zg9snwkhsibmvasdjsm8fi1shjs77b0"; depends=[knitr ontologyIndex S4Vectors SummarizedExperiment]; }; - structToolbox = derive2 { name="structToolbox"; version="1.0.1"; sha256="1xviv72qrqhc7rzs7ydc83fkk6msvxsmx4y86qgw1pc4hc8hybc2"; depends=[ggplot2 ggthemes gridExtra scales sp struct]; }; - subSeq = derive2 { name="subSeq"; version="1.18.0"; sha256="0x71zy0r5zp4l2mlypx2rykaay4wbjx82qy91nzk55z7qhid5451"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; - supraHex = derive2 { name="supraHex"; version="1.26.0"; sha256="170jz908g52xdybb6d4nqwrhyvjs80ffqv2yna59g9ysav280h0y"; depends=[ape hexbin MASS]; }; - survcomp = derive2 { name="survcomp"; version="1.38.0"; sha256="0df9pzgv71s3qz1qhi4p4y517w2zsrnvfh691izsfagm1drgdacm"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; - survtype = derive2 { name="survtype"; version="1.4.0"; sha256="16cdkqr88zdvm9kdvh6f63rld1aavnhba20gxdhad61nmkzd65y2"; depends=[clustvarsel pheatmap SummarizedExperiment survival survminer]; }; - sva = derive2 { name="sva"; version="3.36.0"; sha256="0xa1lm0k1a6nig90mab6xh4gln88rbs5l1cdr6ik6agg7jhs7ji4"; depends=[BiocParallel edgeR genefilter limma matrixStats mgcv]; }; - swfdr = derive2 { name="swfdr"; version="1.14.0"; sha256="1wjk0ni3b0qis27ki6crh0a68zrsbh2gynsgcl9v3zxnsczrhhyw"; depends=[]; }; - switchBox = derive2 { name="switchBox"; version="1.24.0"; sha256="1p39zz1jn4v2489n9kqpn4mzsq1mxh2bhsmfmfq0058h2ql80r90"; depends=[gplots pROC]; }; - switchde = derive2 { name="switchde"; version="1.14.0"; sha256="15kq7zyk1yrqrs54p921zm68s91nay7ymdm0rdnbh2z93dhv0ccm"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; }; - synapter = derive2 { name="synapter"; version="2.12.0"; sha256="0bpn350m5p35rxncqixvik26bilih1yks1jgkz1qd3a31vg0cxk5"; depends=[Biobase Biostrings cleaver knitr lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; }; - synergyfinder = derive2 { name="synergyfinder"; version="2.2.4"; sha256="02f6k7arxh6v9m6ardmvy5gsgxs0d1jq715dhcsf6z211yhrwyvn"; depends=[drc ggplot2 lattice nleqslv reshape2]; }; - synlet = derive2 { name="synlet"; version="1.18.0"; sha256="1d7ffnv0kxjd9y35lmdzzdvrvnbbfjkf0zc4y4d4h7s8ildfsi0s"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; - systemPipeR = derive2 { name="systemPipeR"; version="1.22.0"; sha256="01ilhlrvy28jfdyxjria4024yryj5zgympgqznw17g3y3az78kk2"; depends=[annotate assertthat batchtools Biostrings DESeq2 DOT edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma magrittr pheatmap rjson Rsamtools rsvg ShortRead stringr SummarizedExperiment VariantAnnotation yaml]; }; - tRNA = derive2 { name="tRNA"; version="1.6.1"; sha256="1wzkxwcacdnipxyyh1afyn27hyw843hajadqw0k2h7jy7jsg5dxf"; depends=[BiocGenerics Biostrings GenomicRanges ggplot2 IRanges Modstrings S4Vectors scales stringr Structstrings XVector]; }; - tRNAdbImport = derive2 { name="tRNAdbImport"; version="1.6.1"; sha256="0gjnxldf4mf67hzzgr16n3jp1pjq9bzqknx8iw90d76wrqd1j0r5"; depends=[BiocGenerics Biostrings GenomicRanges httr IRanges Modstrings S4Vectors stringr Structstrings tRNA xml2]; }; - tRNAscanImport = derive2 { name="tRNAscanImport"; version="1.8.1"; sha256="0mbzszh18nal6kfnvbxg52gyr8b3gqg0gg314m5xk7g7icps8bgv"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors stringr Structstrings tRNA XVector]; }; - tRanslatome = derive2 { name="tRanslatome"; version="1.26.0"; sha256="1j5rc26qwvmck94kx1shi94ilgk8ahq5jc5azjssh1ydfi8n46bq"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd sigPathway topGO]; }; - target = derive2 { name="target"; version="1.2.0"; sha256="0cljpjfl5ybzsv6x0x0s5dfv3qv04rsc49lzn9jiaiv8yz0wbzdx"; depends=[BiocGenerics GenomicRanges IRanges matrixStats shiny]; }; - tenXplore = derive2 { name="tenXplore"; version="1.10.0"; sha256="0g5gmhwpmyv7csyfcy0minh2law9vak7b1vzwhws4c285a30nsql"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; }; - ternarynet = derive2 { name="ternarynet"; version="1.32.0"; sha256="1xakvyinbk08qsl8czzcfix7rd51ylqbzml3vbaimjij24w61ga5"; depends=[igraph]; }; - tidybulk = derive2 { name="tidybulk"; version="1.0.2"; sha256="06yawix0whsg0knhbc1km1in1njx5lj4yq39j475imbv23wr3gjl"; depends=[dplyr lifecycle magrittr preprocessCore purrr readr rlang tibble tidyr]; }; - tigre = derive2 { name="tigre"; version="1.42.0"; sha256="1ai4ygai6094shavp5s6zkczgsmkfc8sv3xad5z2hdi53lap3gvl"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; - tilingArray = derive2 { name="tilingArray"; version="1.66.0"; sha256="0q2h1bgyj9sa03d8f6lyrqx336ln74zky1ijqzdrhnd1vyjdlbbf"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; - timeOmics = derive2 { name="timeOmics"; version="1.0.1"; sha256="0ks7aarl88sl5x0p43x8w0i6ai64ydz86jm47vysya0mdl3apsyc"; depends=[dplyr ggplot2 ggrepel lmtest magrittr mixOmics propr purrr stringr tibble tidyr]; }; - timecourse = derive2 { name="timecourse"; version="1.60.0"; sha256="16pla2lp8agkv23pjg015dh0davwjdxhlb0npyynnnrgsbrsnxn7"; depends=[Biobase limma marray MASS]; }; - timescape = derive2 { name="timescape"; version="1.12.0"; sha256="0as8viljb0ivq8ngvjqc4kli48x559amgr9v5jkmxl29bpblv2l5"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; }; - tkWidgets = derive2 { name="tkWidgets"; version="1.66.0"; sha256="1v335n7yb9586i43q5m3fzw3gxnyghwib66zb5z5bj9720z0h7cy"; depends=[DynDoc widgetTools]; }; - tofsims = derive2 { name="tofsims"; version="1.16.0"; sha256="0ij0nmans69hp3h6l80aqn3lhzxlfyn7gvxmc1fmikv5y15sv3ds"; depends=[ALS KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; - topGO = derive2 { name="topGO"; version="2.40.0"; sha256="13rhbvn27sj75fklf1cnjaazacx8yyjlhqlnbp5zk157q6y5cwdr"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; - topconfects = derive2 { name="topconfects"; version="1.4.0"; sha256="1wphsf09ji2mdhdyd4xzka4b6s8xc8kmyz7gk798796h2qr4w5s7"; depends=[assertthat ggplot2]; }; - topdownr = derive2 { name="topdownr"; version="1.10.0"; sha256="0vhlic84vlq8m6npkq97r1vzppfwpyzl7q6mhw2g6kjaglp0gkyh"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR ProtGenerics S4Vectors]; }; - trackViewer = derive2 { name="trackViewer"; version="1.24.2"; sha256="172vxksv33f829vibdvvcl11jqv8q8kqqsnzm3kvvm1virwj6z39"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph grImport Gviz htmlwidgets InteractionSet IRanges plotrix Rgraphviz Rsamtools rtracklayer S4Vectors scales]; }; - tracktables = derive2 { name="tracktables"; version="1.22.0"; sha256="1r8i05wak92s9cq7jg9s5kdyx2yix973d6rpav2lc9ngnqaa485d"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; }; - tradeSeq = derive2 { name="tradeSeq"; version="1.2.01"; sha256="1jqy2xn58j89lfsah9gvkphq9a5a8s7h6g5025r13n7ksh3whfbp"; depends=[Biobase BiocParallel clusterExperiment dplyr edgeR ggplot2 igraph magrittr mgcv monocle pbapply princurve RColorBrewer S4Vectors SingleCellExperiment slingshot SummarizedExperiment tibble]; }; - transcriptR = derive2 { name="transcriptR"; version="1.16.0"; sha256="0wy5jdfivbr1wfcpi56srn7xc0gg7iz3jq21k50z48zr8f3vmmbp"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; - transcriptogramer = derive2 { name="transcriptogramer"; version="1.10.0"; sha256="13bjcs3wl4ky5b51p9lvlhn2a3472shkim6jjy5jhh23njvynnq1"; depends=[biomaRt data_table doSNOW foreach ggplot2 igraph limma progress RedeR snow tidyr topGO]; }; - transite = derive2 { name="transite"; version="1.6.2"; sha256="0l0yca9az9ggbd6bmwjzs4rcm6fbwi07i50fjm96gx2zapgsjx74"; depends=[BiocGenerics Biostrings dplyr GenomicRanges ggplot2 ggseqlogo gridExtra Rcpp RcppArmadillo scales TFMPvalue]; }; - traseR = derive2 { name="traseR"; version="1.18.0"; sha256="0hd6483s92mby7pdzx8siil1issf1dz13f6yrpi1jzbjw16vcla5"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; - treeio = derive2 { name="treeio"; version="1.12.0"; sha256="1jkd96gqcfnhvx3d4f4ba9r39nxz2fyykc9i1kgl6ac43kcnrhfp"; depends=[ape dplyr jsonlite magrittr rlang tibble tidytree]; }; - trena = derive2 { name="trena"; version="1.10.2"; sha256="06d561sj2x3n9lcz9pjzrljk5lqdc4c76h27fpqjm9h2iwkkc02x"; depends=[AnnotationDbi BiocParallel biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RMySQL RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 vbsr xgboost]; }; - triform = derive2 { name="triform"; version="1.29.0"; sha256="089b7f6dwpi9abj0ncswbi4s30k45996zb99sh43avw6jcb6qj60"; depends=[BiocGenerics IRanges yaml]; }; - trigger = derive2 { name="trigger"; version="1.34.0"; sha256="01baq975bb34v0ip5hygm2l2bqwahh4dwaqwhfkfazrrcqgl2yd3"; depends=[corpcor qtl qvalue sva]; }; - trio = derive2 { name="trio"; version="3.26.0"; sha256="0p0drzajv52jgkspklzwp8x3gfx3i0qcpirxpiw12z0l6npdkjxp"; depends=[LogicReg siggenes survival]; }; - triplex = derive2 { name="triplex"; version="1.28.0"; sha256="1aadf8b24pxnqn738nj6xyjr6zn496r507ypkhwvzir06ilmjp5k"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; }; - tscR = derive2 { name="tscR"; version="1.0.1"; sha256="10r7dpsdiz3qg17xjc83amfsqlhgj367lwd7axpbzh4906q4jcp1"; depends=[class cluster dplyr dtw GenomicRanges ggplot2 gridExtra IRanges kmlShape knitr latex2exp prettydoc RColorBrewer rmarkdown S4Vectors SummarizedExperiment]; }; - tspair = derive2 { name="tspair"; version="1.46.0"; sha256="1j46ws31rnlazi9diijb20hqbf6bmaca8fsqqx8iy6xgkvpv6cqj"; depends=[Biobase]; }; - tweeDEseq = derive2 { name="tweeDEseq"; version="1.34.0"; sha256="1xmh63nb407nvkrdgxp2gav09496pxaadw482gcbs02qk45lah42"; depends=[cqn edgeR limma MASS]; }; - twilight = derive2 { name="twilight"; version="1.64.0"; sha256="1hq28bskrz4fyzcfy0zz2vjbn1dz2y3yks5rcprnq6gjhy0dgv7f"; depends=[Biobase]; }; - twoddpcr = derive2 { name="twoddpcr"; version="1.12.0"; sha256="0i2084pqswhcwr8ldkw3f9d3phwi0rq5jl6b6xw7fzlmifa0l1gb"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; }; - tximeta = derive2 { name="tximeta"; version="1.6.3"; sha256="19yacn1pmgmvj8fclz32mhm76d4qdkplfwj12bcp9492qpxyldma"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings ensembldb GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite Matrix rappdirs S4Vectors SummarizedExperiment tibble tximport]; }; - tximport = derive2 { name="tximport"; version="1.16.1"; sha256="1x9959lkjl2h869rgd1b30q1idxzjkr1fyqbpndqk3kbi4q2gr40"; depends=[]; }; - uSORT = derive2 { name="uSORT"; version="1.14.0"; sha256="1qsgbr4ljngl4qjdvrx7plj81alxyaqnbzy94w44agxngl8y44z6"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; }; - unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.24.0"; sha256="1l9gxq3askr3cz2a4bqsw7vjr1agivzvx651cblkygv57x08zf81"; depends=[BiocGenerics HTqPCR]; }; - universalmotif = derive2 { name="universalmotif"; version="1.6.4"; sha256="10j37wj2lyazgq32xxjrisgc8lqr17n8igmic2adgm3azc79m2q0"; depends=[ape BiocGenerics Biostrings ggplot2 ggseqlogo ggtree MASS processx Rcpp RcppThread Rdpack rlang S4Vectors yaml]; }; - variancePartition = derive2 { name="variancePartition"; version="1.18.3"; sha256="1jrlhi2c5ibvq8a41g5hwdq4kk4rdd7m464rz5767zaaci7l2ay0"; depends=[Biobase BiocParallel colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 lmerTest MASS pbkrtest progress reshape2 scales]; }; - vasp = derive2 { name="vasp"; version="1.0.0"; sha256="1zvby4m66q61d6mjh9hlfhr2sf9iy3g83xwjd7fbxcj5vlp86piv"; depends=[ballgown cluster GenomeInfoDb GenomicAlignments GenomicRanges IRanges matrixStats Rsamtools S4Vectors Sushi]; }; - vbmp = derive2 { name="vbmp"; version="1.56.0"; sha256="0vgskhxmgdfwk3dvmsh62x4sw2rqdhcckjbifbj5s8dv636jf5w8"; depends=[]; }; - vidger = derive2 { name="vidger"; version="1.8.0"; sha256="1qxxsqpc11fd211f4p0hzrjl7y8n5s7si1clv4hp0x4h5g7b3z0s"; depends=[Biobase DESeq2 edgeR GGally ggplot2 ggrepel knitr RColorBrewer rmarkdown scales SummarizedExperiment tidyr]; }; - viper = derive2 { name="viper"; version="1.22.0"; sha256="0gy47aafrh0vs00p5ifwnygc3cf9vsa3nl1gk5ycnd12p1h1sn6r"; depends=[Biobase e1071 KernSmooth mixtools]; }; - vsn = derive2 { name="vsn"; version="3.56.0"; sha256="1k82dikrv1gcync5y1131wg7z1kxv2z2jl4nndg20bixc3398h58"; depends=[affy Biobase ggplot2 lattice limma]; }; - vtpnet = derive2 { name="vtpnet"; version="0.28.0"; sha256="1074qq8344jxzma3d2sk8rlv6ss3p5hsll0yd9nbaark2yl7gwkr"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; - vulcan = derive2 { name="vulcan"; version="1.10.0"; sha256="1r2miwfz6dz2wgj3yklnnj5fxnrhcaf0fb6z8lc4m9llfcazbs60"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; }; - waddR = derive2 { name="waddR"; version="1.2.0"; sha256="0vdmvw4n0jglhnikv5z5np4nxn0x40aqlsarpigr1gakm66srh5v"; depends=[arm BiocFileCache BiocParallel Rcpp RcppArmadillo SingleCellExperiment]; }; - wateRmelon = derive2 { name="wateRmelon"; version="1.32.0"; sha256="1c3a6bq3ggmv8kmdfrgiar6nwgircgzjrbgd9z9dqiin7j13gxwn"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; - wavClusteR = derive2 { name="wavClusteR"; version="2.22.0"; sha256="0204czqjmkwhd6gznwxzb0vj3dg3aif628g8c30085aa2jljn9bk"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr]; }; - weaver = derive2 { name="weaver"; version="1.54.0"; sha256="16dx8capljv0m23mrsxg53hvn2yhx6b29mqsgmha671pj9hyrx0f"; depends=[codetools digest]; }; - webbioc = derive2 { name="webbioc"; version="1.60.0"; sha256="16376ya5a5x2hwkl1v9y4r7np1drdwm912knnqg2dn90zmrdwr5f"; depends=[affy annaffy Biobase BiocManager gcrma multtest qvalue vsn]; }; - weitrix = derive2 { name="weitrix"; version="1.0.0"; sha256="1wy2s2jgwy0gzhs3q4m1g0djmn3wxmzndxw7w460za3k2yfsh067"; depends=[assertthat BiocGenerics BiocParallel DelayedArray DelayedMatrixStats dplyr ggplot2 limma purrr reshape2 RhpcBLASctl S4Vectors scales SummarizedExperiment]; }; - widgetTools = derive2 { name="widgetTools"; version="1.66.0"; sha256="0lrdpsgm9r7yfyyj5crvb7px4hrghxhmiic4iissz40slbfyvilx"; depends=[]; }; - wiggleplotr = derive2 { name="wiggleplotr"; version="1.12.1"; sha256="1wknigh1md3w4h68caqlpq945maipdkpmw10hc2rlx4nbbpcnawp"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; }; - xcms = derive2 { name="xcms"; version="3.10.2"; sha256="0sk53jcl7sjrpw2ncdpl8sw1b1j9mizlrj517rinr1qrbm6lsn8f"; depends=[Biobase BiocGenerics BiocParallel IRanges lattice MassSpecWavelet MSnbase mzR plyr ProtGenerics RANN RColorBrewer robustbase S4Vectors SummarizedExperiment]; }; - xmapbridge = derive2 { name="xmapbridge"; version="1.46.0"; sha256="1qz39p1nr0j245smcng0qzraz7k9j363c48ppp5hdw076cz622m0"; depends=[]; }; - xps = derive2 { name="xps"; version="1.48.0"; sha256="185cvningg3vnzvchfczjph2wlpwfmyhhnfjfigf0gis8a8asar9"; depends=[]; }; - yamss = derive2 { name="yamss"; version="1.14.0"; sha256="00x2lnssgzbmhy5bb2m0f8rq2nsz3lb5xlp2vhkcagza39h3xb0c"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; }; - yaqcaffy = derive2 { name="yaqcaffy"; version="1.48.0"; sha256="1l0cblh9sfrsil15bjya7d8kkas8bj6klj2w3c4384njdsjsjcf0"; depends=[simpleaffy]; }; - yarn = derive2 { name="yarn"; version="1.14.0"; sha256="1xdjwy1gkfg8lhgq4iwwmbi01903qljjs7yd96cvacmvgn8z6qvx"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; }; - zFPKM = derive2 { name="zFPKM"; version="1.10.0"; sha256="0scszhfqrgzhglz1a6kxfydq9dx8fqx28j3dypp91y5ah2w6mdys"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; }; - zinbwave = derive2 { name="zinbwave"; version="1.10.1"; sha256="10p3map06plf68d8xls6hdx1crqrrxwzxr1k6kgz9jhdjlcnnfgd"; depends=[BiocParallel edgeR genefilter Matrix SingleCellExperiment softImpute SummarizedExperiment]; }; - zlibbioc = derive2 { name="zlibbioc"; version="1.34.0"; sha256="0j1l052jb2cwc1nifxzwknc9csagf4f2d092zs0i95dz0rma89l0"; depends=[]; }; + ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.20.0"; sha256="0i0214ap9f6lnyawdgcdsds6g3g9qqji3wbn6ln6rs698gjs9w9c"; depends=[ABAData data_table GOfuncR gplots gtools Rcpp]; }; + ABSSeq = derive2 { name="ABSSeq"; version="1.44.0"; sha256="0dmkr4qf98r4f9h8spd1q7yblas6xhq8xwkswl4w8rza4mmhgn5x"; depends=[limma locfit]; }; + ABarray = derive2 { name="ABarray"; version="1.58.0"; sha256="0jz9gm8d5nhxklb5g3jqwwwqdhja9bmih4h3fa9rbwz13rdlzg36"; depends=[Biobase multtest]; }; + ACE = derive2 { name="ACE"; version="1.8.0"; sha256="103m3xl8i977vjnmsh14nr92lrwar9a0i0rlmg06fiqbs1m9hqj3"; depends=[Biobase GenomicRanges ggplot2 QDNAseq]; }; + ACME = derive2 { name="ACME"; version="2.46.0"; sha256="0rzbmnx6hg0wmcbm15k4nwh3ds51kp3l1jghm0lkwbzgdgcn067v"; depends=[Biobase BiocGenerics]; }; + ADAM = derive2 { name="ADAM"; version="1.6.0"; sha256="0dncdry5185f05gw7n9afrmsy73ilwpknbcs5pb2chwjpjdvqd5d"; depends=[dplyr DT GO_db KEGGREST knitr pbapply Rcpp stringr SummarizedExperiment]; }; + ADAMgui = derive2 { name="ADAMgui"; version="1.6.0"; sha256="1vhj0mrdg7b1dkyrlw57jkf4b695c3wnfa00af1146zpdhcz0dxm"; depends=[ADAM colorRamps data_table dplyr DT ggplot2 ggpubr ggrepel ggsignif GO_db gridExtra knitr RColorBrewer reshape2 shiny shinyjs stringi stringr testthat varhandle]; }; + ADImpute = derive2 { name="ADImpute"; version="1.0.0"; sha256="0v9bn1plyk22kncx7yqgs6bgmvy0wkpdqx88n8p7iz2zsaxg9ywb"; depends=[BiocParallel data_table DrImpute kernlab MASS Matrix rsvd S4Vectors SAVER SingleCellExperiment SummarizedExperiment]; }; + ADaCGH2 = derive2 { name="ADaCGH2"; version="2.30.0"; sha256="0rglihkj0dr5h2wsckhkv0d0daljija82dzdf7dcyw7bi1x081cj"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; + AGDEX = derive2 { name="AGDEX"; version="1.38.0"; sha256="11gj5k78br7vdqzkx3yxh56lzdhig3mq3a9jp73yzvr7injl3y05"; depends=[Biobase GSEABase]; }; + AIMS = derive2 { name="AIMS"; version="1.22.0"; sha256="0746wjy07gdr19plyz0irnyprv5azzdm31s70h12xlgxsiqfpcpg"; depends=[Biobase e1071]; }; + ALDEx2 = derive2 { name="ALDEx2"; version="1.22.0"; sha256="06n9ks7dqb1382js7lzjr5fvl87z20k69gwm0vhyb0zi1wadllds"; depends=[BiocParallel GenomicRanges IRanges multtest S4Vectors SummarizedExperiment zCompositions]; }; + ALPS = derive2 { name="ALPS"; version="1.4.0"; sha256="0bd8s6sb7zfhmgram2hnay7h72rd14gg3szjv5rckflpmywijblq"; depends=[assertthat BiocParallel ChIPseeker corrplot data_table dplyr genefilter GenomicRanges GGally gghalves ggplot2 ggseqlogo Gviz magrittr org_Hs_eg_db plyr reshape2 rtracklayer stringr tibble tidyr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + AMARETTO = derive2 { name="AMARETTO"; version="1.6.0"; sha256="0mn1rj8av3dwjspr9vm3a2gqhc0lwz4p62h347sa2slfs0wfiqzn"; depends=[BiocFileCache callr circlize ComplexHeatmap curatedTCGAData doParallel dplyr DT foreach ggplot2 glmnet gridExtra httr impute knitr limma Matrix matrixStats MultiAssayExperiment Rcpp readr reshape2 rmarkdown tibble]; }; + AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.16.0"; sha256="1mdw6yss3bdz1pbh7y6x5dckmhg3dnj75y5kwlmlw2wn0m0ainb5"; depends=[]; }; + ANCOMBC = derive2 { name="ANCOMBC"; version="1.0.5"; sha256="0yn1g4fmshap9ms8ajdq4shpwn1bkri4czwphq0svhsf5lbl5br0"; depends=[MASS microbiome nloptr phyloseq Rdpack]; }; + ANF = derive2 { name="ANF"; version="1.12.0"; sha256="09g199khn5m2v2f99r51aj6jgfi830rfqxajfclpq6jnq8krv5zv"; depends=[Biobase igraph MASS RColorBrewer survival]; }; + APAlyzer = derive2 { name="APAlyzer"; version="1.4.0"; sha256="1x1j1y4wbbqfm01n34lbcx9k3jsq23pwyps62cpdwbgzmzbaaz29"; depends=[dplyr ensembldb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel repmis Rsubread rtracklayer SummarizedExperiment tidyr VariantAnnotation]; }; + ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.30.0"; sha256="1ximvi0jbwmymx6iy70qfyr9j26x5arlarra9fzs5hq05jif6q95"; depends=[ARRmData]; }; + ASAFE = derive2 { name="ASAFE"; version="1.16.0"; sha256="0ziwi9gdzn107pbvv31cmigi7c772aqyxmrdsx888xwjdfsnrc82"; depends=[]; }; + ASEB = derive2 { name="ASEB"; version="1.34.0"; sha256="0hcvmzjf8yrjqkckc9b4y2g9sr1c5gl2wz0cbg5vjdsckccjxai6"; depends=[]; }; + ASGSCA = derive2 { name="ASGSCA"; version="1.24.0"; sha256="110xsk71ljrsizhyz79facq87hwf5p5qyyh68apn37nnk9yiy24a"; depends=[MASS Matrix]; }; + ASICS = derive2 { name="ASICS"; version="2.6.1"; sha256="00rppx02bjn9wb7cmhmv4md32ghp30w6izxg42gqv56acxgiyhy6"; depends=[BiocParallel ggplot2 glmnet gridExtra Matrix mvtnorm PepsNMR plyr quadprog ropls SummarizedExperiment zoo]; }; + ASSET = derive2 { name="ASSET"; version="2.8.0"; sha256="0hjzkdz2pvayfkbkgbizcs6j68hbww1qbjsgg4q81lpnh9j4qpv5"; depends=[MASS msm rmeta]; }; + ASSIGN = derive2 { name="ASSIGN"; version="1.26.0"; sha256="00205kp1xfq5pbvd4b7gc658f6pqph9rqyrgxgg54bvdzwn5s4nj"; depends=[ggplot2 gplots msm Rlab sva yaml]; }; + ASpediaFI = derive2 { name="ASpediaFI"; version="1.4.0"; sha256="0xhzf1vrpshfkzz9a65lgv1ikrhd0wq0wm756rw70hckpb8c43v3"; depends=[BiocParallel biomaRt dplyr DRaWR e1071 fgsea GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz igraph IRanges IVAS limma Matrix mGSZ reshape2 ROCR Rsamtools rtracklayer S4Vectors scales SummarizedExperiment]; }; + ASpli = derive2 { name="ASpli"; version="2.0.0"; sha256="0kg6rspbyxm5hc5plmysvjqip31w4czzl0jnbnvb151n2kjqr44g"; depends=[AnnotationDbi BiocGenerics BiocStyle data_table DT edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz htmltools igraph IRanges limma MASS Rsamtools S4Vectors tidyr UpSetR]; }; + ATACseqQC = derive2 { name="ATACseqQC"; version="1.14.4"; sha256="04sn0zl4m60i5jvqz5rmhc4qwcgrhk6rhznrygmm93k9v363mbn9"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno edgeR GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges KernSmooth limma motifStack preseqR randomForest Rsamtools rtracklayer S4Vectors]; }; + AUCell = derive2 { name="AUCell"; version="1.12.0"; sha256="0ibsf3nid27hipr03z7phh0yzwfj8bqza6n6g7wfghpls4l12ipx"; depends=[BiocGenerics data_table GSEABase mixtools R_utils S4Vectors shiny SummarizedExperiment]; }; + AWFisher = derive2 { name="AWFisher"; version="1.4.0"; sha256="03241iicl80yxzn1nqrhna52i9wp5gpfvz3m5qc68jbh7k07nj68"; depends=[edgeR limma]; }; + AffiXcan = derive2 { name="AffiXcan"; version="1.8.0"; sha256="154ssc5fqf3r095laimf6194f8dp3gjw26g6npak94pxfbzl2v1m"; depends=[BiocParallel crayon MultiAssayExperiment SummarizedExperiment]; }; + AffyCompatible = derive2 { name="AffyCompatible"; version="1.50.0"; sha256="0pcs51miy45bky26i1d4iarbjh569gssb5g4fr26bzgjmq19yl7x"; depends=[Biostrings RCurl XML]; }; + AffyExpress = derive2 { name="AffyExpress"; version="1.56.0"; sha256="08n06gynnik9vg28gnnn059wjgnx2zwvlcfwsllfv01h0mc3r0mn"; depends=[affy limma]; }; + AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.36.0"; sha256="1vgc6fj3v6q40ik56ck88f69k273bsbbgrk26jd1cglf77gq0crb"; depends=[affy]; }; + AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.40.0"; sha256="0rwdadrgjjkzfn6h0jxrwz8gvng5ynka9fd2hiv7llxvyl04s7r1"; depends=[affy affycoretools Biobase limma preprocessCore]; }; + AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.28.0"; sha256="1hk08kwxjlg2jb59bwv9fbc446pyf6knkscfj757nl6yjf11akbl"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; + AlphaBeta = derive2 { name="AlphaBeta"; version="1.4.0"; sha256="0nc3f6c5kfw6j11afi47ma2w93fi9yka6l4kwqgksi1zvbkn52sw"; depends=[BiocParallel data_table dplyr expm ggplot2 gtools igraph optimx plotly stringr]; }; + AlpsNMR = derive2 { name="AlpsNMR"; version="3.0.6"; sha256="1r4fq7ciwz5ipfbsgj1sjdxam06wms7dbnqbx9xrima6wnpcqj6y"; depends=[assertthat baseline BiocParallel dplyr fs furrr future GGally ggplot2 ggrepel glue htmltools magrittr matrixStats mixOmics pcaPP plyr purrr readxl reshape2 rlang rmarkdown S4Vectors signal speaq stringr SummarizedExperiment tibble tidyr tidyselect writexl zip]; }; + AnVIL = derive2 { name="AnVIL"; version="1.2.1"; sha256="10xx1x2fj0df0ifixj54q2knzj4qqdwaqji6gpbz90c9bbnklxxk"; depends=[BiocManager curl dplyr futile_logger httr jsonlite rapiclient rlang tibble tidyselect]; }; + AnVILBilling = derive2 { name="AnVILBilling"; version="1.0.1"; sha256="0k8xjanmyvmhy8vpjxxhk7ml6053kxf25n5lrswfxa0xdv52ij9n"; depends=[bigrquery DBI dplyr DT ggplot2 lubridate magrittr plotly shiny shinytoastr]; }; + AnVILPublish = derive2 { name="AnVILPublish"; version="1.0.0"; sha256="1lfn04m54x1yyv51rz5hc3hzwv5lgg2kw2bjqml6s7hkjab86yaa"; depends=[AnVIL httr rmarkdown whisker]; }; + Anaquin = derive2 { name="Anaquin"; version="2.14.0"; sha256="0x09iqpxxp9cwjcz04q33k9alalj9mh2d7ffmwsjs52vsy4j44fa"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; }; + AneuFinder = derive2 { name="AneuFinder"; version="1.18.0"; sha256="1j2n6i3ja63i98y1mbb8ndn6cn2a0pw97zz6al4myycnv55w49j3"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel ecp foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; }; + AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.52.0"; sha256="0zqxgh3nx6y8ry12s2vss2f4axz5vpqxha1y4ifhhcx4zhpzsglr"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; }; + AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.14.0"; sha256="0npk0laa2rc93rsh6yikj886zf2fl53a050j07fj9w67j0q0h3s9"; depends=[GenomicRanges lazyeval]; }; + AnnotationForge = derive2 { name="AnnotationForge"; version="1.32.0"; sha256="0y3820dkvwz09wlmz9drx6gqpsr9cwppaiz40zafwfxbz65y8px7"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; + AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.40.0"; sha256="0xsm7741zm81bi4c9hy0zaacnk8a6bahdpc6srqzrbsz0pfzdyhr"; depends=[AnnotationDbi DBI]; }; + AnnotationHub = derive2 { name="AnnotationHub"; version="2.22.1"; sha256="08d7m0n4jkpajsj0bvi5xd4vi1zqczl6lnrh8kqi2fbjkrvwdqp5"; depends=[AnnotationDbi BiocFileCache BiocGenerics BiocManager BiocVersion curl dplyr httr interactiveDisplayBase rappdirs RSQLite S4Vectors yaml]; }; + AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.20.2"; sha256="072452wzvjgjsgwfz0psbl67jzfhfy2ikvawwwyraxrpyhaqkzns"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocManager biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite OrganismDbi RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; + ArrayExpress = derive2 { name="ArrayExpress"; version="1.50.0"; sha256="1zcmlw5lrk52cp54jmc8k9m8fb56k29qxqg2dsbg14n8xjxb79j2"; depends=[Biobase limma oligo XML]; }; + ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.40.0"; sha256="1vpaix450z3amm2sfrhax3as82ww9kfdlpbs5zydr8hr8r0zpimd"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer Rhtslib rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; + ArrayTools = derive2 { name="ArrayTools"; version="1.50.0"; sha256="03skzhjv17fpx1bkgxcbl0yn9dilbarpwib7l537i21nc5xvzgrs"; depends=[affy Biobase limma xtable]; }; + AssessORF = derive2 { name="AssessORF"; version="1.8.0"; sha256="1r9yzkj3am1cwhaaj9v5dr1lm6lzxy6v7y58n7jxb1njvzp1hi5d"; depends=[Biostrings DECIPHER GenomicRanges IRanges]; }; + Autotuner = derive2 { name="Autotuner"; version="1.4.0"; sha256="13x8n6q4cpbmmzb1638fz75y1rxgr15lzpdm3v0nn90cjsqay7fx"; depends=[assertthat Biobase cluster entropy MSnbase mzR RColorBrewer scales]; }; + BAC = derive2 { name="BAC"; version="1.50.0"; sha256="1i1h09jrsqwk7cak6cz3flrczky68216rdmh15alxjnnzqgqnswp"; depends=[]; }; + BADER = derive2 { name="BADER"; version="1.28.0"; sha256="1bdxl5lkipjgd5rxlrjcj5zx79niv1j8n53h8myimmab64dhhhdq"; depends=[]; }; + BAGS = derive2 { name="BAGS"; version="2.30.0"; sha256="0j60d3p05fkjq1q36yxyjcxbd8xcclg5ahb78skyp63gkpqys20q"; depends=[Biobase breastCancerVDX]; }; + BANDITS = derive2 { name="BANDITS"; version="1.6.0"; sha256="19dnnhn05vmryq04majml119imx75c6dy0g9kc6w68vqaav6lvln"; depends=[BiocParallel data_table doParallel doRNG DRIMSeq foreach ggplot2 MASS R_utils Rcpp RcppArmadillo]; }; + BASiCS = derive2 { name="BASiCS"; version="2.2.4"; sha256="0pjqn6ngischav8a4fm1gr1wvkgy7kl8aw9z80kkyji8iacmwzzy"; depends=[assertthat Biobase BiocGenerics BiocParallel coda cowplot ggExtra ggplot2 hexbin MASS Matrix matrixStats Rcpp RcppArmadillo reshape2 S4Vectors scran SingleCellExperiment SummarizedExperiment viridis]; }; + BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.20.0"; sha256="0gza7i6xdqa0i58c1f28764l438yglvhigc7wkczcjch4cqrns4x"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; + BCRANK = derive2 { name="BCRANK"; version="1.52.0"; sha256="16ayq8igxsymjrblnwz17x32sgygqqysqs4pw2q59kibzaaav27a"; depends=[Biostrings]; }; + BDMMAcorrect = derive2 { name="BDMMAcorrect"; version="1.8.0"; sha256="1lbd6lvk78s9hnpg7sxfk9r3p7h323qqjvamqrnlh28v6v3pwlkl"; depends=[ape ellipse ggplot2 Rcpp RcppArmadillo RcppEigen SummarizedExperiment vegan]; }; + BEARscc = derive2 { name="BEARscc"; version="1.10.0"; sha256="1iaq3vx1g38dsfv67ivrsxgicjbv9lq8vsj8zqv8pi9mdradrlv8"; depends=[data_table ggplot2 SingleCellExperiment]; }; + BEAT = derive2 { name="BEAT"; version="1.28.0"; sha256="125rk0vdakcz43x2lz6gszy95x5nw0x5gk5jxclj2zj7wxsaj2p2"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; + BEclear = derive2 { name="BEclear"; version="2.6.0"; sha256="0g3cdhj4nwjhz9l3cail62j60l9mjpcxp9cfj0dvvy8awnaj4rvg"; depends=[abind BiocParallel data_table futile_logger Matrix outliers Rcpp Rdpack]; }; + BGmix = derive2 { name="BGmix"; version="1.50.0"; sha256="0r9gjqajarg5mivxhqdzn8m8hmfarmzbplp3zqyyznccri03pv50"; depends=[KernSmooth]; }; + BHC = derive2 { name="BHC"; version="1.42.0"; sha256="1n2rkbj8j10f38d40wvi6mwjxnrlfx71a48ab07bp2s0hwhxd7yn"; depends=[]; }; + BLMA = derive2 { name="BLMA"; version="1.14.0"; sha256="15x8lz959iblapj4qh47p10b631qmqnhpbkwyzjhh8hwnwxwwnpv"; depends=[Biobase graph GSA limma metafor PADOG ROntoTools]; }; + BPRMeth = derive2 { name="BPRMeth"; version="1.16.0"; sha256="0gdrrmskla2rf3cadf1r785d0ph0zviklprfb85cgwvjf64vnq09"; depends=[assertthat BiocStyle cowplot data_table doParallel e1071 earth foreach GenomicRanges ggplot2 IRanges kernlab magrittr MASS matrixcalc mvtnorm randomForest Rcpp RcppArmadillo S4Vectors truncnorm]; }; + BRAIN = derive2 { name="BRAIN"; version="1.36.0"; sha256="0srrbr8x498z6mcpz155kl23y07pjnb4nk7i8vysyi2330dlc0wb"; depends=[Biostrings lattice PolynomF]; }; + BRGenomics = derive2 { name="BRGenomics"; version="1.2.0"; sha256="0szxzx6dbbfyjg543mppzywgqnjrx2wzsrzv58d5f9bbjkh6gmj0"; depends=[DESeq2 GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + BSgenome = derive2 { name="BSgenome"; version="1.58.0"; sha256="1gbvmxr6r57smgvhqgwspbcnwyk4hsfkxkpzzcs6470q03zfb4wq"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges matrixStats Rsamtools rtracklayer S4Vectors XVector]; }; + BUMHMM = derive2 { name="BUMHMM"; version="1.14.0"; sha256="02bn5z8gr64zh7viqd8sbpcj16j48rpycdlvj36qq7dcijnh7mby"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; }; + BUS = derive2 { name="BUS"; version="1.46.0"; sha256="0acqznbg84m78cqdl3hspk4rnlhg6y2w5j0xk8vyq6pd8a216c3w"; depends=[infotheo minet]; }; + BUScorrect = derive2 { name="BUScorrect"; version="1.8.0"; sha256="1kwqyqy9rrdpdxh5za68qzi5w8b4r8c2ag0wmliisy6bq13hxrqc"; depends=[gplots SummarizedExperiment]; }; + BUSpaRse = derive2 { name="BUSpaRse"; version="1.4.2"; sha256="1v6arpmh0lalklr4y7kwxi1x89xwv86kh62wd2h1p583fhd8407q"; depends=[AnnotationDbi AnnotationFilter BH BiocGenerics biomaRt Biostrings BSgenome dplyr ensembldb GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr Matrix plyranges Rcpp RcppArmadillo RcppProgress S4Vectors stringr tibble tidyr zeallot]; }; + BaalChIP = derive2 { name="BaalChIP"; version="1.16.0"; sha256="1ixks2km3ia46r3vrdjaylac3wwnl1bz5kmsynxapa1aj7658ppk"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; }; + BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.18.0"; sha256="1zrbcindd71lqq04f7n9id53gcvysl3f61s5j9sfvjawz3asbnfr"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; + BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.34.0"; sha256="01s9njrf4bplqh1agb2awy2vwm8lkhp17yxwni9xasask1ivbw2h"; depends=[RCurl RJSONIO]; }; + Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.26.0"; sha256="1a0fybmnjxk4sh66la52z9an5l8n4726yhm33scmvq7ygq25xinw"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; + BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.18.0"; sha256="0s1nnydpgvy0cspl4ls842xwdgzjpddpwrs5j6ndwi6kv2jxp9d0"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; }; + BatchQC = derive2 { name="BatchQC"; version="1.18.0"; sha256="0rzb63xbkzgyxzfi82jm29z37cvw3jf29z5g4vm1fswzyzs7bcr6"; depends=[corpcor ggvis gplots heatmaply knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; + BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.16.0"; sha256="0q9l0avwjhzcq140620q8lbpwxp0kw2wkw1shpnmwcv7dj6v5ilp"; depends=[Biobase]; }; + BayesSpace = derive2 { name="BayesSpace"; version="1.0.0"; sha256="1wzj2scx99r3vy5jp8fj8cyp9fzz17zican7a2b2l7z506hq11v7"; depends=[assertthat BiocFileCache coda DirichletReg ggplot2 Matrix mclust purrr Rcpp RcppArmadillo RcppDist RcppProgress RCurl rhdf5 S4Vectors scales scater scran SingleCellExperiment SummarizedExperiment xgboost]; }; + BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.42.0"; sha256="1sad6wzwdxb1hva2kws2nsq5a15jqwqlx17b17fmsamdl7zr68af"; depends=[]; }; + BgeeCall = derive2 { name="BgeeCall"; version="1.6.2"; sha256="0mydw0smrszzlnqw14n9rcj9l48yv7caj1hjcgjg02kxqf0ravw3"; depends=[biomaRt Biostrings GenomicFeatures jsonlite rhdf5 rslurm rtracklayer tximport]; }; + BgeeDB = derive2 { name="BgeeDB"; version="2.16.0"; sha256="0jfwmmalsbh1321yj19zn1ax93ymvjcxfka5fq39la15j74j2hdq"; depends=[Biobase curl data_table digest dplyr graph RCurl RSQLite tidyr topGO]; }; + BiFET = derive2 { name="BiFET"; version="1.10.0"; sha256="191m1xhsj4l64rrh67hqiz1rdkfhw0gfd5aymf3x0xm710l3rh4a"; depends=[GenomicRanges poibin]; }; + BiGGR = derive2 { name="BiGGR"; version="1.26.0"; sha256="1hlsnss6071ck4ky1akxp1dnv3vmd8f85drdziqmm4nc2dfrr14y"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; }; + BiRewire = derive2 { name="BiRewire"; version="3.22.0"; sha256="1h9zjjd5krsjpbxlmsbzwx7kbishn0z6mpm8zmrcpmbfrprp38qw"; depends=[igraph Matrix slam tsne]; }; + BiSeq = derive2 { name="BiSeq"; version="1.30.0"; sha256="0lfj7nhkl6djf55piq52fhl5zw05r0r5dzxzd1l7xhzfnjyrgxns"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; + BicARE = derive2 { name="BicARE"; version="1.48.0"; sha256="1np3967rjx54hbjsynvya75lcsqa6zic6frw5fjwqybwv2pzzw2k"; depends=[Biobase GSEABase multtest]; }; + BioCor = derive2 { name="BioCor"; version="1.14.0"; sha256="12slrdn98h43j3y7klk3chrwa2ycwm4krhz3l3kfzbxr834mhy19"; depends=[BiocParallel GSEABase Matrix]; }; + BioMM = derive2 { name="BioMM"; version="1.6.0"; sha256="0386j0nsixgxwr70qblzllr04m4fllypyximd9py2a04b5jxqcl3"; depends=[BiocParallel CMplot e1071 ggplot2 glmnet imager lattice nsprcomp precrec ranger rms topGO vioplot xlsx]; }; + BioMVCClass = derive2 { name="BioMVCClass"; version="1.58.0"; sha256="0ndpy2cyf9fpppxax3vbwgmva5f3w7h92gzgklsdq9vxfrwvmb6z"; depends=[Biobase graph MVCClass Rgraphviz]; }; + BioNet = derive2 { name="BioNet"; version="1.50.0"; sha256="1nl1yx6q44rn8fjjdb1krp8090bkiivaj6javpynpsva0alxydix"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; + BioNetStat = derive2 { name="BioNetStat"; version="1.10.5"; sha256="1idj1xcvnv2x3lyvvdb7lzzcx87c6z3cirxr79kl1531wn9wd5sk"; depends=[BiocParallel DT ggplot2 Hmisc igraph knitr markdown pathview pheatmap plyr psych RColorBrewer RJSONIO rmarkdown shiny shinyBS whisker yaml]; }; + BioQC = derive2 { name="BioQC"; version="1.18.0"; sha256="1l6lss9vic01vh43czsb5c1b5125356fj72yvfxcrazladyswpar"; depends=[Biobase edgeR Rcpp]; }; + BioTIP = derive2 { name="BioTIP"; version="1.4.0"; sha256="05qkmm2iylv30vy5hwdlafw3913flp3r9s4dbx281qqc45fmvy9m"; depends=[cluster GenomicRanges Hmisc igraph MASS psych stringr]; }; + Biobase = derive2 { name="Biobase"; version="2.50.0"; sha256="11kgc4flywlm3i18603558l8ksv91c24vkc5fnnbcd375i2dhhd4"; depends=[BiocGenerics]; }; + BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.52.0"; sha256="03n49b6fvyyzmvdy4yif3cl7yv21c09c8xdx4cvvax5zz4v4sab1"; depends=[Biobase]; }; + BiocCheck = derive2 { name="BiocCheck"; version="1.26.0"; sha256="1hyncn9zqj432da95k86rm5b28nbwrvzm52jbhisifkxj1j43cib"; depends=[BiocManager biocViews codetools graph httr knitr optparse stringdist]; }; + BiocDockerManager = derive2 { name="BiocDockerManager"; version="1.2.1"; sha256="117ypchb6r3jg7k0pq3fpsgllzw4xsrfy072ay9mqmyrm99lkn0p"; depends=[dplyr httr memoise readr whisker]; }; + BiocFileCache = derive2 { name="BiocFileCache"; version="1.14.0"; sha256="0r032a033636bxap0vvb02jvjqiynzj9npqd8603qnwmhvvfi5z1"; depends=[curl DBI dbplyr dplyr httr rappdirs RSQLite]; }; + BiocGenerics = derive2 { name="BiocGenerics"; version="0.36.1"; sha256="0x8cllriayrs99wd5l003iq6i28rb1mci23qcn13ga85578f5lz5"; depends=[]; }; + BiocIO = derive2 { name="BiocIO"; version="1.0.1"; sha256="06gg5ra3r7q4b6mz14c2s9d453cnh1lxh517ffl9f8dr8vwv5s18"; depends=[BiocGenerics GenomicRanges RCurl S4Vectors]; }; + BiocNeighbors = derive2 { name="BiocNeighbors"; version="1.8.2"; sha256="19gyl917lf5ydy5hgj0hnc388rw5sbj83awav9js2yr2zmbgn4d7"; depends=[BiocParallel Matrix Rcpp RcppHNSW S4Vectors]; }; + BiocOncoTK = derive2 { name="BiocOncoTK"; version="1.10.0"; sha256="1jwp0gww2xyx8qfv5h4y0v3g66mmlyrd1v64xn91si4fsymk4108"; depends=[bigrquery car ComplexHeatmap curatedTCGAData DBI dplyr DT GenomicFeatures GenomicRanges ggplot2 ggpubr graph httr IRanges magrittr plyr Rgraphviz rjson S4Vectors scales shiny SummarizedExperiment]; }; + BiocParallel = derive2 { name="BiocParallel"; version="1.24.1"; sha256="1iryicvmcagcrj29kp49mqhiq2kn72j4idj380hi9illmdrg9ism"; depends=[BH futile_logger snow]; }; + BiocPkgTools = derive2 { name="BiocPkgTools"; version="1.8.2"; sha256="18m816mh1ic0znp38wax8xppai77lkym3w84x4x30x2mf0vriqfw"; depends=[BiocFileCache BiocManager biocViews dplyr DT gh graph htmltools htmlwidgets httr igraph jsonlite magrittr rappdirs RBGL readr rex rlang rvest stringr tibble tidyr tidyselect xml2]; }; + BiocSet = derive2 { name="BiocSet"; version="1.4.0"; sha256="16pjg09i0j5qk9s9qzm6fq5q0bgwb4wgqvp6scs06ajgrr07qjqg"; depends=[AnnotationDbi BiocIO dplyr KEGGREST ontologyIndex plyr rlang S4Vectors tibble tidyr]; }; + BiocSingular = derive2 { name="BiocSingular"; version="1.6.0"; sha256="1hczix1h14d19hzcsngqkqqnqkprs41phzlcird8haxnw9bs03ni"; depends=[beachmat BiocGenerics BiocParallel DelayedArray irlba Matrix Rcpp rsvd S4Vectors]; }; + BiocSklearn = derive2 { name="BiocSklearn"; version="1.12.0"; sha256="09v30d2ikakf89kyhsgq6zb6ac1psk19k649n3jin90mb13c5vz2"; depends=[basilisk knitr Rcpp reticulate SummarizedExperiment]; }; + BiocStyle = derive2 { name="BiocStyle"; version="2.18.1"; sha256="0rsxyna4dd99x42vc82mlkxx774vb9375llpakg53max1hhwkrqp"; depends=[BiocManager bookdown knitr rmarkdown yaml]; }; + BiocVersion = derive2 { name="BiocVersion"; version="3.12.0"; sha256="1cj9swyf4zbkdq45bhw0kymh2aghkwimxjlfj5r2j7kdiyh6n3rk"; depends=[]; }; + BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.16.0"; sha256="0lvckdy20bhgyhqbccp0rdfi2p6vvip694r27qwpyi5092nfmqh6"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown rstudioapi stringr usethis]; }; + Biostrings = derive2 { name="Biostrings"; version="2.58.0"; sha256="1rbqhs73mhfr1gi0rx28jiyan7i3hb45ai3jpl1656fnrhgjfxq5"; depends=[BiocGenerics crayon IRanges S4Vectors XVector]; }; + BitSeq = derive2 { name="BitSeq"; version="1.34.0"; sha256="0rs9n1w23qrs1rci3a369z4m5sxai29vxzj2yc3pavff43whb4sl"; depends=[IRanges Rhtslib Rsamtools S4Vectors]; }; + BrainSABER = derive2 { name="BrainSABER"; version="1.0.0"; sha256="0ynk4aryshidp4i698sh2mqg2p9ayn96q5qzxrgbl7m1xsdpx6cj"; depends=[BiocFileCache biomaRt data_table lsa S4Vectors SummarizedExperiment]; }; + BrainStars = derive2 { name="BrainStars"; version="1.34.0"; sha256="0y3bnyi0ky2hrlc7m7shai2p64rigbqmvy6xy514ww3rsf5rmdyb"; depends=[Biobase RCurl RJSONIO]; }; + BridgeDbR = derive2 { name="BridgeDbR"; version="2.0.2"; sha256="04plq6xm7fiwilbdym7jrhfgr9kbszksl85qip12b5h9f8gvjdq6"; depends=[curl rJava]; }; + BrowserViz = derive2 { name="BrowserViz"; version="2.12.0"; sha256="11ivxmicxkk4kx0w1dhcb44mxa9zn0lcqy6gj4166wbc0jg93dbx"; depends=[BiocGenerics httpuv jsonlite]; }; + BubbleTree = derive2 { name="BubbleTree"; version="2.20.0"; sha256="1kgnndqq6gsvgmh4v5lddnq94d9vcvwhvdy1834k6jn3q44s021z"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; }; + BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.54.0"; sha256="18k45dx13nymv4xfld6gzjd2ym04k0gkx201f9rqnw80cwh2da5c"; depends=[]; }; + BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.54.0"; sha256="1jaf76fiz18hfg5dp5jhb91d8i72lz3nqgpq1xdll690sqj1lvak"; depends=[BufferedMatrix]; }; + CAFE = derive2 { name="CAFE"; version="1.26.0"; sha256="12pwc2s0amzzs2gidl11vqh31a1mvp0cjifq4rgsnj105y8vlpm3"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; + CAGEfightR = derive2 { name="CAGEfightR"; version="1.10.0"; sha256="10jd5l3szji7qqvla9ldmapbfhvf0h7f0dpgn5gzpfqqnq5cn3rw"; depends=[assertthat BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicInteractions GenomicRanges Gviz InteractionSet IRanges Matrix pryr rtracklayer S4Vectors SummarizedExperiment]; }; + CAGEr = derive2 { name="CAGEr"; version="1.32.1"; sha256="0maiblqf4r2drvdwhhs10y2hkn07byn4bmv435kz0fwx9wx197i9"; depends=[beanplot BiocGenerics BiocParallel BSgenome data_table DelayedArray formula_tools GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges KernSmooth memoise MultiAssayExperiment plyr reshape Rsamtools rtracklayer S4Vectors som stringdist stringi SummarizedExperiment vegan VGAM]; }; + CAMERA = derive2 { name="CAMERA"; version="1.46.0"; sha256="015mxv3xiy1z48y40lrjfwgv87cvmgzf3xr6s0bgxd7brvxy0714"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; + CARNIVAL = derive2 { name="CARNIVAL"; version="1.2.0"; sha256="0ybsbfxrjpdhv4y234ajfnxdqc073y7vfyhhbilhxf2949vc4m4s"; depends=[AnnotationDbi Category doParallel ggplot2 igraph lpSolve readr UniProt_ws viper]; }; + CATALYST = derive2 { name="CATALYST"; version="1.14.1"; sha256="04b5kcvkfiw4ina11x3qf5kwrb7056zihm7xp1919bqm8k7nl3mn"; depends=[circlize ComplexHeatmap ConsensusClusterPlus cowplot data_table dplyr drc flowCore FlowSOM ggplot2 ggrepel ggridges gridExtra magrittr Matrix matrixStats nnls purrr RColorBrewer reshape2 Rtsne S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; }; + CAnD = derive2 { name="CAnD"; version="1.22.0"; sha256="0x958rd0gxzr07bkvy0gfncc5iiinkgp86knjj7my1bnba9kp95s"; depends=[ggplot2 reshape]; }; + CCPROMISE = derive2 { name="CCPROMISE"; version="1.16.0"; sha256="07q65fjvh9ffkk0mqwl15x0c2j4rrhafw8wv8y5ikwrjv6d6ryr0"; depends=[Biobase CCP GSEABase PROMISE]; }; + CEMiTool = derive2 { name="CEMiTool"; version="1.14.1"; sha256="1d159fyynq5ng9dm36zahc17akaq5nr1gps3i151jwargq292ifz"; depends=[clusterProfiler data_table dplyr DT fastcluster fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; }; + CFAssay = derive2 { name="CFAssay"; version="1.24.0"; sha256="0186ibfk56czyq9idi6sb0r1482fpgbz6gnn4v0iz0lp4fd3z4bi"; depends=[]; }; + CGHbase = derive2 { name="CGHbase"; version="1.50.0"; sha256="10zhjmls3f63cj0bnywjb97zhrj7x3xsq6yjhvf5cclxc4kcrcx4"; depends=[Biobase marray]; }; + CGHcall = derive2 { name="CGHcall"; version="2.52.0"; sha256="1a6k87xfm79wnsc30k5aziakv51h4dd9zqw81q8bd72hc3fpz8ba"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; + CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.44.0"; sha256="0nydcclli5hblni96hjgkb2llj2lx2xcdvc2jsb3rs2f37awlbvn"; depends=[Biobase CGHbase CGHcall]; }; + CGHregions = derive2 { name="CGHregions"; version="1.48.0"; sha256="1kmppvhvzky913yh1ma4fsrf0rlld3wl32k5q16i7z2sj1gkrb8h"; depends=[Biobase CGHbase]; }; + CHETAH = derive2 { name="CHETAH"; version="1.6.0"; sha256="0j1n9jr887yvvb9xi1i9bklpmb8ji0ldss5ab1q1lp75bpgwqygv"; depends=[bioDist corrplot cowplot dendextend ggplot2 gplots pheatmap plotly reshape2 S4Vectors shiny SingleCellExperiment SummarizedExperiment]; }; + CHRONOS = derive2 { name="CHRONOS"; version="1.18.0"; sha256="05qpk3qd5khmskqzvjjgizfz1qwyg41lndbcdgif8irwf4xmnqs9"; depends=[biomaRt circlize doParallel foreach graph igraph openxlsx RBGL RCurl rJava XML]; }; + CINdex = derive2 { name="CINdex"; version="1.18.0"; sha256="07z46w4ifip7mwzv6866n9l477hf5fvjr03fq8r8pq0qwygci8sa"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; + CMA = derive2 { name="CMA"; version="1.48.0"; sha256="0wzf32cg34l7hazc6qlsy3ra8b9lalxi8fj36s6flqn0f7bzya1n"; depends=[Biobase]; }; + CNAnorm = derive2 { name="CNAnorm"; version="1.36.0"; sha256="1ng5hznlmp02y75g05c7a6zj2d1pdjbdnah798b0ng3ckqw5hq1p"; depends=[DNAcopy]; }; + CNEr = derive2 { name="CNEr"; version="1.26.0"; sha256="0qy4pm23vyy23zwsjkf0mpf2c0p54nq26w9lq7j0ld4bx9l3jc6c"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; }; + CNORdt = derive2 { name="CNORdt"; version="1.32.0"; sha256="1gg6p59hj602vqhhn9hasm100lqx9ra9wlb9iykczhhgnmrvk707"; depends=[abind CellNOptR]; }; + CNORfeeder = derive2 { name="CNORfeeder"; version="1.30.0"; sha256="0v4467q9w7qzqv8rpdw78098aivkl0pfsj485wcasfk8932c3nmm"; depends=[CellNOptR graph]; }; + CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.32.0"; sha256="1fqc6rxwmkl8pqjmqg799rvyayc14xf1pp2g5h33zlx4lblv53hd"; depends=[CellNOptR nloptr]; }; + CNORode = derive2 { name="CNORode"; version="1.32.0"; sha256="0fsr1y1vlb0nk0jh8j0xngmn1x7q099cx2kc3lyh1vcy62xzhkjv"; depends=[CellNOptR genalg]; }; + CNTools = derive2 { name="CNTools"; version="1.46.0"; sha256="021pwiqzyp4grbfshsvc7kgv1f9276n7dn593br698xjdh4wz004"; depends=[genefilter]; }; + CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.22.0"; sha256="0kdpcdhzl9951g36s7m30yqcar7h5w16j3x0l1qrm9py08b1kgcd"; depends=[BiocGenerics exomeCopy foreach GenomeInfoDb GenomicRanges ggplot2 gplots IRanges NOISeq openxlsx plyr reshape2 Rsamtools S4Vectors shiny shinyFiles shinyjs stringr testthat]; }; + CNVRanger = derive2 { name="CNVRanger"; version="1.6.1"; sha256="1sy14h1dq9yr4xvxji2g3x4x2z85wn68hmlil425z24fxjywynj0"; depends=[BiocGenerics BiocParallel data_table edgeR GDSArray gdsfmt GenomeInfoDb GenomicRanges IRanges lattice limma plyr qqman RaggedExperiment rappdirs reshape2 S4Vectors SNPRelate SummarizedExperiment]; }; + CNVfilteR = derive2 { name="CNVfilteR"; version="1.4.2"; sha256="1bp0yi6jblkviw7mjhgfj0i6szhg8cw0k1q5y622lpkd7in4cdhn"; depends=[assertthat Biostrings CopyNumberPlots GenomeInfoDb GenomicRanges IRanges karyoploteR pracma regioneR Rsamtools SummarizedExperiment VariantAnnotation]; }; + CNVrd2 = derive2 { name="CNVrd2"; version="1.28.0"; sha256="0l3ggab6ja699x3kfj66pn7v7sl0bh3jz4ijha6g7v8n22f1787v"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; + COCOA = derive2 { name="COCOA"; version="2.4.0"; sha256="1nxs4dfr533z7qs8g1vzzw85c2w9xbx8hzhs26x9m29139px3pkr"; depends=[Biobase BiocGenerics ComplexHeatmap data_table fitdistrplus GenomicRanges ggplot2 IRanges MIRA S4Vectors simpleCache tidyr]; }; + CODEX = derive2 { name="CODEX"; version="1.22.0"; sha256="1mrj697x2f94dla9ykxgrqhv7w6jq3z5mvycrfkwq73n1i6v913s"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; + COHCAP = derive2 { name="COHCAP"; version="1.36.0"; sha256="17b7digmhkx02crc10xyxj65772nl3a2c6lnwwc587mj1f7sa6gi"; depends=[BH COHCAPanno gplots RColorBrewer Rcpp RcppArmadillo WriteXLS]; }; + COMPASS = derive2 { name="COMPASS"; version="1.28.0"; sha256="1l1qcl7vnjc8846f24mpvmgxra8n9sd6d65231q7s446p353lbs0"; depends=[abind BiocStyle clue coda data_table dplyr foreach knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang rmarkdown scales tidyr]; }; + CONFESS = derive2 { name="CONFESS"; version="1.18.0"; sha256="0ymraymc6pjp02lf5j1lqqbnvd3ga4x5m1p6xxgqr61akgcwrfkf"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; + CORREP = derive2 { name="CORREP"; version="1.56.0"; sha256="1zy9qgq1g4q93b8nfilq1yghjvppi4plm0rrqs18qvszbk94ksq7"; depends=[e1071]; }; + COSNet = derive2 { name="COSNet"; version="1.24.0"; sha256="0bb6bahgcgmfi3f3qlip627yq3ffym6zwp9xnaq8i8mvzp9lws78"; depends=[]; }; + CRISPRseek = derive2 { name="CRISPRseek"; version="1.30.1"; sha256="0zk9ayfmaknrysz4ka9wgqhnzrlyahzjsrs28i4fnywbjl6nsg2q"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges reticulate rhdf5 S4Vectors seqinr]; }; + CRImage = derive2 { name="CRImage"; version="1.38.0"; sha256="18scvrqmdam3amm94rhx4ggqlgazjll7ydm8722fx6a8vd6hcma0"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; + CSAR = derive2 { name="CSAR"; version="1.42.0"; sha256="1wprm304ca6ydlsf51bvmf5lnqphyvsg606yzwcvgzrfkry7kmfv"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + CSSP = derive2 { name="CSSP"; version="1.28.0"; sha256="1ma473a3kzck7ycigaybdgyv2j6n4sw5imw3z3mwym2y9dn187p8"; depends=[]; }; + CSSQ = derive2 { name="CSSQ"; version="1.2.0"; sha256="1mp4s26cy952facrc8gwj42ngn96ad886aly2rp4bf1n5sxp4maj"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + CancerInSilico = derive2 { name="CancerInSilico"; version="2.10.0"; sha256="1mpd6cnb1qfnknf0zkn7qsimr819pki96sqk5iv810fi2jy8wz1w"; depends=[BH Rcpp]; }; + CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.32.0"; sha256="1n3viksbg69hcr4a9xyhm3x61m4c0y0gh67jw9mabkbrwnfcvi2s"; depends=[AnnotationDbi limma qvalue]; }; + CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.16.0"; sha256="1z1nyva7k4vcd612ck7j5xbjrcwd3prcm6jg1kfiypdz2bbl3wyl"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust survival]; }; + Cardinal = derive2 { name="Cardinal"; version="2.8.0"; sha256="02j7v7x08nac40jhmnnav7rkgsd6g1yvb0pj6r6qml9ry4dd5320"; depends=[Biobase BiocGenerics BiocParallel dplyr EBImage irlba lattice magrittr Matrix matter mclust nlme ProtGenerics S4Vectors signal sp viridisLite]; }; + Category = derive2 { name="Category"; version="2.56.0"; sha256="0m77wpnica0h2ia9ajdaiga4plgz1s9wls6pdnxzk7kwl8a68wkr"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; }; + CausalR = derive2 { name="CausalR"; version="1.22.0"; sha256="08ldzx611j01r6k2hs4319yjlcpd2g92z0wf43pnhavbiv18b2d6"; depends=[igraph]; }; + CeTF = derive2 { name="CeTF"; version="1.2.4"; sha256="00jnig0myi6nxlhsx8sxaf3sx4q4jaaw40kws3i2gj0jgxmsz6zr"; depends=[circlize clusterProfiler ComplexHeatmap DESeq2 GenomicTools GenomicTools_fileHandler GGally ggnetwork ggplot2 ggpubr ggrepel igraph Matrix network Rcpp RcppArmadillo RCy3 S4Vectors SummarizedExperiment WebGestaltR]; }; + CellBench = derive2 { name="CellBench"; version="1.6.0"; sha256="1y396c8s2a465m77hxz6avcrh15czd0pvx2gsxjqk4q7jf1avy04"; depends=[BiocFileCache BiocParallel dplyr glue lubridate magrittr memoise purrr rappdirs rlang SingleCellExperiment tibble tidyr tidyselect]; }; + CellMapper = derive2 { name="CellMapper"; version="1.16.0"; sha256="13791r6bbrxqnmnvbz9f1m4jplrj2f2h2i3lmq6gypyxwhvf3yd5"; depends=[S4Vectors]; }; + CellMixS = derive2 { name="CellMixS"; version="1.6.1"; sha256="1ba6162n0gpkvyk2kf75cymysqsfcxn4pb0g4incxxmfm4x2hnnf"; depends=[BiocGenerics BiocNeighbors BiocParallel cowplot dplyr ggplot2 ggridges kSamples magrittr purrr scater SingleCellExperiment SummarizedExperiment tidyr viridis]; }; + CellNOptR = derive2 { name="CellNOptR"; version="1.36.0"; sha256="1nz3qc6v9pij3f0f3ckn82hdpz5j94gsgdch5xkwdn7zn95wjzl7"; depends=[ggplot2 graph hash igraph RBGL RCurl Rgraphviz stringi stringr XML]; }; + CellScore = derive2 { name="CellScore"; version="1.10.0"; sha256="1hydll39d194n3xvy6196sdh1qy0xl2rydvgdaclcmppx002w39s"; depends=[Biobase gplots lsa RColorBrewer squash]; }; + CellTrails = derive2 { name="CellTrails"; version="1.8.0"; sha256="01af2c32pln2warph2rqxhjdc8yn1hnak046941wdp7rj6fcpima"; depends=[Biobase BiocGenerics cba dendextend dtw EnvStats ggplot2 ggrepel igraph maptree mgcv reshape2 Rtsne SingleCellExperiment SummarizedExperiment]; }; + CellaRepertorium = derive2 { name="CellaRepertorium"; version="1.0.0"; sha256="0xwzibxr80vxn1b9s9lra11vnqfs3anr75h18kk3bqw40n62ifdy"; depends=[BiocGenerics Biostrings dplyr forcats Matrix progress purrr Rcpp reshape2 rlang S4Vectors stringr tibble tidyr]; }; + CexoR = derive2 { name="CexoR"; version="1.28.0"; sha256="1al9vaxlfb9w6q53rqxdhz18rv1xkhmky92wqjl6mlz99bcwcdb8"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; + ChAMP = derive2 { name="ChAMP"; version="2.20.1"; sha256="1nfqw2ndq4yn6l56iyhdpfjcwxb83mxknn3m008mq5ag9j2dshg0"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel DT GenomicRanges ggplot2 globaltest goseq Hmisc Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva kpmt limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; }; + ChIC = derive2 { name="ChIC"; version="1.10.0"; sha256="0amiz5p87r542hr4wvh41s0dij2j4g20y3csa19dci74nciyjcam"; depends=[BiocGenerics caret caTools ChIC_data GenomicRanges IRanges progress S4Vectors spp]; }; + ChIPComp = derive2 { name="ChIPComp"; version="1.20.0"; sha256="0dbypfgys74snmyf982183ilzg6vamfw1d5y0lp5p8zxbffh2xl7"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; + ChIPQC = derive2 { name="ChIPQC"; version="1.26.0"; sha256="1im1p5347ivxj5gjakxcnk0ysc9vbn62s042dy8lcc4p3wnkipbk"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; + ChIPSeqSpike = derive2 { name="ChIPSeqSpike"; version="1.9.0"; sha256="1d1g203w5i88n1xbpz3svqk7fdns4pvbck9hfy5nwxkqy85s6xgl"; depends=[BiocGenerics corrplot GenomicRanges ggplot2 IRanges LSD Rsamtools rtracklayer S4Vectors seqplots stringr]; }; + ChIPXpress = derive2 { name="ChIPXpress"; version="1.34.0"; sha256="04gnvxx5zqaspc0ignbx840y74bm6hxifqs8aq1gqavmx6v949s8"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; + ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.12.0"; sha256="1l10nms6qkxwqp95ii6shhj2q380f03nyvf5s79v6zvnc28lkwyj"; depends=[BiocManager Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges RcppRoll ROCR rtracklayer S4Vectors]; }; + ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.14.0"; sha256="15r5jgkfwwfqpw4v4q2ddmglm3bfw002nnbnzn1s0v2b1w3bgiag"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; }; + ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.24.2"; sha256="0l417aygs89wf1j9fjpfjhahzskbpbgcrm8xpx3qm4s0307vfzkw"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI dplyr ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 graph IRanges KEGGREST matrixStats multtest RBGL regioneR Rsamtools rtracklayer S4Vectors SummarizedExperiment VennDiagram]; }; + ChIPseeker = derive2 { name="ChIPseeker"; version="1.26.2"; sha256="1r197qwsriap6s6nb2p9j3521pjs2f0lgyzvppvlxj1531sa6g6z"; depends=[AnnotationDbi BiocGenerics boot dplyr enrichplot GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene]; }; + ChIPseqR = derive2 { name="ChIPseqR"; version="1.44.0"; sha256="1w44cr8rylha26jjvzg05q4rv68ji40ajbvsihvw4b8zp3zm5lxj"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; + ChIPsim = derive2 { name="ChIPsim"; version="1.44.0"; sha256="0vs1kjip9zz8ab01l37j7mny0d1wv40vzr1vwcxcmj095g3j7ycn"; depends=[Biostrings IRanges ShortRead XVector]; }; + ChemmineOB = derive2 { name="ChemmineOB"; version="1.28.4"; sha256="0np0kzy4d3w79k2nr4hv17zx9nyld50w6dz0im9ciisb6ya4ba8x"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; + ChemmineR = derive2 { name="ChemmineR"; version="3.42.2"; sha256="10d8h6w24h4s7l02zzv6q46w3yiqsjizip7mf11cvkmd6p7qxfl9"; depends=[base64enc BH BiocGenerics DBI digest DT ggplot2 gridExtra png Rcpp RCurl rjson rsvg]; }; + Chicago = derive2 { name="Chicago"; version="1.18.0"; sha256="1w94sm0wbh6rzjfi84v8y959mwfik71q7pmijbkappz5bm1hk72i"; depends=[data_table Delaporte Hmisc MASS matrixStats]; }; + ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.44.0"; sha256="1n64di6vggw1whz9f6fjm549zm9ijpd59cqn0gdmdsf5h3x1cmv0"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; }; + ChromSCape = derive2 { name="ChromSCape"; version="1.0.0"; sha256="0fr0jbswgmxpl3asj4vj8w3990i4cylwb483i5clbhmbqh767w89"; depends=[batchelor BiocParallel colorRamps colourpicker ConsensusClusterPlus dplyr DT edgeR fs GenomicRanges ggplot2 IRanges irlba jsonlite kableExtra Matrix msigdbr plotly qualV rlist Rsamtools rtracklayer Rtsne S4Vectors scater scran shiny shinycssloaders shinydashboard shinyFiles shinyhelper shinyjs SingleCellExperiment stringdist SummarizedExperiment tibble tidyr umap viridis]; }; + CiteFuse = derive2 { name="CiteFuse"; version="1.2.1"; sha256="14dq451d9nmmpbfdn7zhsnraj5289892nl1gs71wp6ggp4a38wsm"; depends=[cowplot dbscan ggplot2 ggraph ggridges gridExtra igraph Matrix mixtools pheatmap propr randomForest reshape2 rhdf5 rlang Rtsne S4Vectors scales scran SingleCellExperiment SummarizedExperiment uwot]; }; + ClassifyR = derive2 { name="ClassifyR"; version="2.10.0"; sha256="05whil0lizxcihpf9n8sdk5ck3as3kny117f4jnbxyh4yjh1qxpb"; depends=[BiocParallel locfit MultiAssayExperiment plyr S4Vectors]; }; + Clomial = derive2 { name="Clomial"; version="1.26.0"; sha256="1ncapsifjhs45jrmly6k4lspp4lam3pm80iw5hwc742c28zzlvvk"; depends=[matrixStats permute]; }; + Clonality = derive2 { name="Clonality"; version="1.38.0"; sha256="0fn9ddfbfjkkczjwa301cfsy1fl42960dbwsi5pjkixdyfs2sqcz"; depends=[DNAcopy]; }; + CluMSID = derive2 { name="CluMSID"; version="1.6.0"; sha256="0rmc7mv9xikydbflnzzzdpsklpdr1j1q4amnkbb8yll7zf1z9y4s"; depends=[ape Biobase dbscan GGally ggplot2 gplots MSnbase mzR network plotly RColorBrewer S4Vectors sna]; }; + ClusterJudge = derive2 { name="ClusterJudge"; version="1.12.1"; sha256="1qpym07wc0sqc9v8s32hb7z248liscwz4njkhl3kq4j79xy48lji"; depends=[httr infotheo jsonlite lattice latticeExtra]; }; + ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.18.0"; sha256="1kw1lm2rsqcq4vifv7bd6v1xqkd97ynq4w047m590y08xz1w1fym"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; + CoCiteStats = derive2 { name="CoCiteStats"; version="1.62.0"; sha256="04qrf00aid3zirbi0g0b7ny7yw465i0vppk1kmmz7yh44yi54jic"; depends=[AnnotationDbi org_Hs_eg_db]; }; + CoGAPS = derive2 { name="CoGAPS"; version="3.10.0"; sha256="0431aiqaibj223xn9qa67shhj5hp30fnyiwrqc99bvjxx99kh6f3"; depends=[BiocParallel cluster gplots RColorBrewer Rcpp rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; }; + CoRegFlux = derive2 { name="CoRegFlux"; version="1.6.0"; sha256="042kpcq9v5szimrg00wyrsrjdql1r0dr6ia2zln24gs2rx15jdaa"; depends=[CoRegNet sybil]; }; + CoRegNet = derive2 { name="CoRegNet"; version="1.28.0"; sha256="1hfj29id91sik0b160mlzakaf75070lv8rgd5y37l0kp1fpxysyi"; depends=[arules igraph shiny]; }; + CompGO = derive2 { name="CompGO"; version="1.26.0"; sha256="0m2vgg7mm4s2i14xslvm93s0b7x1f0ywwfxql0ni73czjik5pprw"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="2.6.2"; sha256="1nx1xxpq8zrvi990v9fmvx3msl85pdz5dp1gp6m78q6i4s2alg5x"; depends=[Cairo circlize clue colorspace digest GetoptLong GlobalOptions IRanges matrixStats png RColorBrewer S4Vectors]; }; + ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.54.0"; sha256="06h85l1mg2kpjprylzz44nhxp64k211plhch5qhg39wp0fk34lfp"; depends=[ALL Biobase cluster]; }; + CopyNumberPlots = derive2 { name="CopyNumberPlots"; version="1.6.0"; sha256="09f5gbw7lch6sbf4hidgijkr2dvz2cx6knyncph77jhvgfhgkp8y"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges karyoploteR regioneR rhdf5 Rsamtools SummarizedExperiment VariantAnnotation]; }; + CopywriteR = derive2 { name="CopywriteR"; version="2.22.0"; sha256="060p6l6l8i6b15hyyz5v5kkxih3h4wcciixii51m9mn82z23xr2f"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; + CoreGx = derive2 { name="CoreGx"; version="1.2.0"; sha256="1iq1m577w81wi4xl8i1liyh8vnwjq57bxc0ph8n0ayz1h2rcf56p"; depends=[Biobase BiocGenerics BiocParallel crayon data_table lsa piano S4Vectors SummarizedExperiment]; }; + Cormotif = derive2 { name="Cormotif"; version="1.36.0"; sha256="1fixghsp8f6j33259kdchnjal86jqjnvc3dhcbzppyrqbji81x2l"; depends=[affy limma]; }; + CountClust = derive2 { name="CountClust"; version="1.18.0"; sha256="0ih52vnkkdx56j8iqfyhikpi6pwg5dg21m54zksb2bvpc9j2sy5z"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; }; + CoverageView = derive2 { name="CoverageView"; version="1.28.0"; sha256="1k89gzqhd8ca8s9gk5bfzringnc5nayqbwzwwy35fls1cg96qmsj"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; + CrispRVariants = derive2 { name="CrispRVariants"; version="1.18.0"; sha256="0carjksv5a73hwic1pzxbwl5rgax0n0makhbbma4viqz58d810aw"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; + CytoDx = derive2 { name="CytoDx"; version="1.10.0"; sha256="161b3q1gcbj8b0rmawic43yw8nk94mvzx1q88gxkjjmb2pp4z9hr"; depends=[doParallel dplyr flowCore glmnet rpart rpart_plot]; }; + CytoML = derive2 { name="CytoML"; version="2.2.2"; sha256="0ckjb7bkz0cy46scrv4vl9w37g54c0yihvzmbkzilip1ikpvhxd1"; depends=[base64enc BH Biobase corpcor cytolib data_table dplyr flowCore flowWorkspace ggcyto graph jsonlite lattice openCyto plyr RBGL Rcpp RcppArmadillo RcppParallel Rgraphviz Rhdf5lib RProtoBufLib RUnit tibble XML xml2 yaml]; }; + CytoTree = derive2 { name="CytoTree"; version="1.0.3"; sha256="0mzcqgmzl8q7zz92648n9m7wwqxgx6jp4ry68fw899qf465hrkw7"; depends=[Biobase BiocNeighbors cluster destiny flowCore FlowSOM flowUtils ggplot2 gmodels igraph limma Matrix matrixStats mclust pheatmap prettydoc RANN Rcpp Rtsne scatterpie scatterplot3d stringr sva umap]; }; + DAMEfinder = derive2 { name="DAMEfinder"; version="1.2.0"; sha256="1v150s4b95gpszzms87jx4s5spn681aai3i6s057bsp89a8915a3"; depends=[BiocGenerics Biostrings bumphunter cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma plyr readr reshape2 Rsamtools S4Vectors stringr SummarizedExperiment VariantAnnotation]; }; + DAPAR = derive2 { name="DAPAR"; version="1.22.9"; sha256="13wfp8985n9d68xiw7jknppmfyy6lz77wlky7d3v56h3dn3h94jp"; depends=[AnnotationDbi apcluster Biobase Cairo cluster clusterProfiler cp4p DAPARdata dendextend diptest doParallel dplyr factoextra FactoMineR forcats foreach ggplot2 gplots graph highcharter igraph imp4p impute knitr lattice limma lme4 Matrix Mfuzz MSnbase multcomp norm openxlsx pcaMethods png preprocessCore purrr RColorBrewer readxl reshape2 scales siggenes stringr tibble tidyr tidyverse tmvtnorm vioplot visNetwork vsn]; }; + DART = derive2 { name="DART"; version="1.38.0"; sha256="0icil7c78s9rs1xnfijx8mgig03p9mwgh5izvv2m631qcxfh5dw2"; depends=[igraph]; }; + DBChIP = derive2 { name="DBChIP"; version="1.34.0"; sha256="17aslxs3yk5ajgji2pl5w8ynczb1qyab81wsqvgnwy40sggm59mw"; depends=[edgeR]; }; + DECIPHER = derive2 { name="DECIPHER"; version="2.18.1"; sha256="0jz2lffks9rrk5wzbvnr8yal91kf8rg2xn0fmg9ywk45ql657sm9"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; + DEComplexDisease = derive2 { name="DEComplexDisease"; version="1.10.0"; sha256="1zqscgql9l3bsz0aiiymy3mv2awsmkncigigcd69w2i6frcyw8k1"; depends=[BiocParallel ComplexHeatmap DESeq2 edgeR Rcpp SummarizedExperiment]; }; + DEFormats = derive2 { name="DEFormats"; version="1.18.0"; sha256="0n192xj3jxr4yfrwi7fhcr1dla33nmysc01rap3k7pq37xnd2sb9"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges S4Vectors SummarizedExperiment]; }; + DEGraph = derive2 { name="DEGraph"; version="1.42.0"; sha256="10kk7z4iqyh25ihfqddhmiqz91bnfs3xnc5166i00mkdx4sqh961"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; + DEGreport = derive2 { name="DEGreport"; version="1.26.0"; sha256="1qqwmxzkf67x7rvili5a3nhvfp53vrrhk6zskdw89kq6kxp5s58p"; depends=[Biobase BiocGenerics broom circlize cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggdendro ggplot2 ggrepel knitr lasso2 logging magrittr Nozzle_R1 psych RColorBrewer reshape rlang S4Vectors scales stringr SummarizedExperiment tibble tidyr]; }; + DEGseq = derive2 { name="DEGseq"; version="1.44.0"; sha256="1wj2wz37bqhi5j0azds7daidmamdakybjvnlga27s123aiw7lghn"; depends=[qvalue]; }; + DEP = derive2 { name="DEP"; version="1.12.0"; sha256="1ag33l1mafyiw2gzybc0cgdq1njl4y3anxav1kxlmbbfk9j1gc89"; depends=[assertthat circlize cluster ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; }; + DEScan2 = derive2 { name="DEScan2"; version="1.10.0"; sha256="04n8z3ld0css74py3xw90wdq46vqbwnpxwhn1kh2yaq05fkrbivd"; depends=[BiocGenerics BiocParallel ChIPpeakAnno data_table DelayedArray GenomeInfoDb GenomicAlignments GenomicRanges glue IRanges plyr Rcpp RcppArmadillo rtracklayer S4Vectors SummarizedExperiment]; }; + DESeq2 = derive2 { name="DESeq2"; version="1.30.1"; sha256="1i0jpzsm1vl7q6qdmplj45w13lsaycxrx5pazlanjba2khn79k19"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; + DEWSeq = derive2 { name="DEWSeq"; version="1.4.4"; sha256="12q4nmm33sxn6g0bmilvy5v0b3k9q19bz6w33dfb1n5dvq9i645f"; depends=[BiocGenerics BiocParallel data_table DESeq2 GenomeInfoDb GenomicRanges R_utils S4Vectors SummarizedExperiment]; }; + DEXSeq = derive2 { name="DEXSeq"; version="1.36.0"; sha256="0wfjb42xcr4wjy8a654b74411dky8hp6sp8xdwf0sxqgsxy106qi"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; + DEqMS = derive2 { name="DEqMS"; version="1.8.0"; sha256="1la1gpwlwkxpbn0l87vfk36x80m34gc5lpdbcfcz10z0xw8a1fwc"; depends=[ggplot2 limma]; }; + DEsingle = derive2 { name="DEsingle"; version="1.10.0"; sha256="0s078z98iigk18k1bymm2fkq48ixd9730hxppgf71lam7fhinykj"; depends=[bbmle BiocParallel gamlss MASS Matrix maxLik pscl VGAM]; }; + DEsubs = derive2 { name="DEsubs"; version="1.16.0"; sha256="0n40xcga20z37jg8q4g569lb9q7p73x4j6qdncl15zh845sq16zb"; depends=[circlize DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL]; }; + DFP = derive2 { name="DFP"; version="1.48.0"; sha256="076cbdm6zm6784spk634f1a0z05g5xlm32n8v1czmbw1sm13xyhh"; depends=[Biobase]; }; + DIAlignR = derive2 { name="DIAlignR"; version="1.2.0"; sha256="1xdql55ssnyxmgk6im2mn5f7dadbhbvmdwqpairrp7b9l585x0jr"; depends=[DBI dplyr ggplot2 gridExtra mzR Rcpp rlang RSQLite scales signal tidyr zoo]; }; + DMCFB = derive2 { name="DMCFB"; version="1.4.0"; sha256="05bcfwvg1b61fr0x62b9ppnp1aj3h8cdjcy2xxh0y9599xsmcjhz"; depends=[arm benchmarkme BiocParallel data_table fastDummies GenomicRanges IRanges MASS matrixStats rtracklayer S4Vectors speedglm SummarizedExperiment tibble]; }; + DMCHMM = derive2 { name="DMCHMM"; version="1.12.0"; sha256="1mnnx0cwxr1bbqjmkkkccv7p52dn77nvwjx6dn3x9gpb63hkyyzd"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; }; + DMRScan = derive2 { name="DMRScan"; version="1.12.0"; sha256="1iim6vf9d25zy9h7634ypr0q8ph8r0x6ia9f5mqxx6kkx3dqlb2d"; depends=[GenomeInfoDb GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; }; + DMRcaller = derive2 { name="DMRcaller"; version="1.22.0"; sha256="1k4x2gjlgzsxnyxg08gr5qqh4ks20fwgfhmwzadnd8fj8hylghf0"; depends=[betareg GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; + DMRcate = derive2 { name="DMRcate"; version="2.4.1"; sha256="09vm8rzl6gjp8x3i84570kp9q6i9wjzz8ihlbg3wmwzm8pf1djqn"; depends=[bsseq DSS edgeR ExperimentHub GenomeInfoDb GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors SummarizedExperiment]; }; + DMRforPairs = derive2 { name="DMRforPairs"; version="1.26.0"; sha256="15bmn9dwaplp8sam5976wc3fsgb5459fdb9b96675gnw212v4gqq"; depends=[GenomicRanges Gviz R2HTML]; }; + DNABarcodeCompatibility = derive2 { name="DNABarcodeCompatibility"; version="1.6.0"; sha256="0dfcz47shzgcvq8zkqq4kx4j6acllv7l6mmkny2l0z4130wngxzi"; depends=[DNABarcodes dplyr numbers purrr stringr tidyr]; }; + DNABarcodes = derive2 { name="DNABarcodes"; version="1.20.0"; sha256="0zzf6xgg6k1gdig8zvpawck2bgmamsc0k43j4pl4xsz9an6dmzbg"; depends=[BH Matrix Rcpp]; }; + DNAcopy = derive2 { name="DNAcopy"; version="1.64.0"; sha256="0km5af4iw8a0m6by933lgdi5246jafyfxk6fsqdiwg07v9wxw5hc"; depends=[]; }; + DNAshapeR = derive2 { name="DNAshapeR"; version="1.18.0"; sha256="11yi7rr8a8ddps2p1b05idmq265gpbp5y1a074mrm0i03sv94syf"; depends=[Biostrings fields GenomicRanges Rcpp]; }; + DOSE = derive2 { name="DOSE"; version="3.16.0"; sha256="149hpf690jls5r5g84sh2hqs10qbqi94syhxfv8n2f800fk7lgy4"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim qvalue reshape2]; }; + DRIMSeq = derive2 { name="DRIMSeq"; version="1.18.0"; sha256="09rvb47k5vbksimkyymbc7m90k9sp9awvgzk316x1lbwxq9ihsk7"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; }; + DSS = derive2 { name="DSS"; version="2.38.0"; sha256="084qcrr4sx9p21wr5pbqqvyqsnswzfnkxaipi1hyzrqnfmypp0cg"; depends=[Biobase BiocParallel bsseq DelayedArray]; }; + DTA = derive2 { name="DTA"; version="2.36.0"; sha256="1z4dv1lz8c1j9m428cqn6f2ilazn3i0x2viv867f8hyam5gwfvbp"; depends=[LSD scatterplot3d]; }; + DaMiRseq = derive2 { name="DaMiRseq"; version="2.2.0"; sha256="1v36vphd9pxjhfxsbwmvjclh7ql4nfwfma0i94sx4kwj5k8s4iky"; depends=[arm caret corrplot DESeq2 e1071 EDASeq edgeR FactoMineR FSelector ggplot2 Hmisc ineq kknn limma lubridate MASS pheatmap pls plsVarSel plyr randomForest RColorBrewer reshape2 RSNNS SummarizedExperiment sva]; }; + DeMAND = derive2 { name="DeMAND"; version="1.20.0"; sha256="1h0k97s4kjzc7j75z4qczkkss9a8y0i2vfgw9330mv4x2zxzrpj3"; depends=[KernSmooth]; }; + DeMixT = derive2 { name="DeMixT"; version="1.6.0"; sha256="17yd879jal5z7j99qafq7vc9jqqcxsb08agyx11wcn029wf5h8xk"; depends=[base64enc ggplot2 KernSmooth knitr matrixcalc matrixStats Rcpp SummarizedExperiment truncdist]; }; + DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.32.0"; sha256="06nqn490adbas07p1n38azadav57mz6ydc6ngwc6ayibiyx4j9ay"; depends=[ggplot2 limSolve pcaMethods]; }; + DeepBlueR = derive2 { name="DeepBlueR"; version="1.16.0"; sha256="0rxhbkr15frg176g8kwb24rszlhhrg5hiknbrbgbryfycvgps5zr"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; }; + DegNorm = derive2 { name="DegNorm"; version="1.0.0"; sha256="0yg7b0ij8ninn1ykv595wl5i3f81jpxisvj5pmp5x1ngni2y1p2h"; depends=[data_table doParallel foreach GenomicAlignments GenomicFeatures GenomicRanges ggplot2 heatmaply IRanges plotly plyr Rcpp RcppArmadillo Rsamtools S4Vectors viridis]; }; + DelayedArray = derive2 { name="DelayedArray"; version="0.16.3"; sha256="0w1wppy6m2iv41852dscg3y19sq84ahdx3m7c2p2pxjcznmv6hys"; depends=[BiocGenerics IRanges Matrix MatrixGenerics S4Vectors]; }; + DelayedDataFrame = derive2 { name="DelayedDataFrame"; version="1.6.0"; sha256="1kd40x81q1bb7g1cn255b80481gb2r22dfc8qcdh8rk2xdg05351"; depends=[BiocGenerics DelayedArray S4Vectors]; }; + DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.12.3"; sha256="1hb8jv5dy3svf7xan6rym7amwdqm5mvl9qx5xhmj1vkb81bizn7h"; depends=[BiocParallel DelayedArray HDF5Array IRanges Matrix MatrixGenerics matrixStats S4Vectors sparseMatrixStats]; }; + DepecheR = derive2 { name="DepecheR"; version="1.6.0"; sha256="0c7yv3a7k22nhhw3601n8jdl61cjmlny9b3nfrzsp78mkxi0h469"; depends=[beanplot doSNOW dplyr FNN foreach ggplot2 gmodels gplots MASS matrixStats mixOmics moments Rcpp RcppEigen reshape2 robustbase viridis]; }; + DiffBind = derive2 { name="DiffBind"; version="3.0.15"; sha256="06f613s8d9z51njyf839g22gwybx9zs5n6xghwr5j1ad2n4m6qwi"; depends=[amap apeglm ashr BiocParallel DESeq2 dplyr GenomicAlignments GenomicRanges ggplot2 ggrepel gplots GreyListChIP IRanges lattice limma locfit RColorBrewer Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment systemPipeR]; }; + DiffLogo = derive2 { name="DiffLogo"; version="2.14.0"; sha256="16af7sfgclmyzxj60j35snmd407l25a0h6nhmsjg4p9giz5ccic1"; depends=[cba]; }; + Director = derive2 { name="Director"; version="1.16.0"; sha256="0v3nf8dvk9zipx2pwzkrj5ldd7dd2ys1350mc6n0cqq8vmjcyfw1"; depends=[htmltools]; }; + DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.32.0"; sha256="098zql6ryd1b0gkq4cjybblyh0x8xidxxfygqq5a5x9asl8y4vsk"; depends=[BiocGenerics IRanges S4Vectors]; }; + DiscoRhythm = derive2 { name="DiscoRhythm"; version="1.6.0"; sha256="1l0nz1xwbx3dvnwr60zycas8x08mplkik9r4d266djb4as3h5xr6"; depends=[BiocGenerics BiocStyle broom data_table dplyr DT ggExtra ggplot2 gridExtra heatmaply kableExtra knitr magick matrixStats matrixTests MetaCycle plotly reshape2 rmarkdown S4Vectors shiny shinyBS shinycssloaders shinydashboard shinyjs SummarizedExperiment UpSetR VennDiagram viridis zip]; }; + DominoEffect = derive2 { name="DominoEffect"; version="1.10.1"; sha256="1lckd9s9s5vwjwl4n1lfsd0jqzd2cjgknxgadz6kgd7ynwbsdlmz"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomeInfoDb GenomicRanges IRanges SummarizedExperiment VariantAnnotation]; }; + Doscheda = derive2 { name="Doscheda"; version="1.12.0"; sha256="1djkx3j7z6jx9zgscrav1x6zcch37yqxakkzg1nx8kfvk9fcx989"; depends=[affy calibrate corrgram drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; }; + DriverNet = derive2 { name="DriverNet"; version="1.30.0"; sha256="10saq3lp7idbf1nq7plxxqz9bp6v75gq82hl27q6ax3y998dbmln"; depends=[]; }; + DropletUtils = derive2 { name="DropletUtils"; version="1.10.3"; sha256="0k7rqv9mh817rqjs74jw0gl2v0izbnwvccynhzch4q9vhnp36bbq"; depends=[beachmat BH BiocGenerics BiocParallel DelayedArray dqrng edgeR HDF5Array Matrix R_utils Rcpp rhdf5 Rhdf5lib S4Vectors scuttle SingleCellExperiment SummarizedExperiment]; }; + DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.32.0"; sha256="1cvfgxaay7w9bp3vwi42xyz0a6v39fv8b5mgb1ar4yf61cxrxk0j"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; + Dune = derive2 { name="Dune"; version="1.2.0"; sha256="13fbxm6fwr2mhqjrj7w574qfpsrs93v62a4g0g24j9vf6pvmi4md"; depends=[BiocParallel dplyr gganimate ggplot2 magrittr mclust purrr RColorBrewer SummarizedExperiment tidyr]; }; + DynDoc = derive2 { name="DynDoc"; version="1.68.0"; sha256="0s4c66biiyzn28n50dlvf4dk1kyqxbdnp4k6mfb8gcmzbvi9pc1w"; depends=[]; }; + EBImage = derive2 { name="EBImage"; version="4.32.0"; sha256="0qi8bbix5bjahs73ljhfvidlbj8hz5m5j0sb9cjxlngnnldbh4ww"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; }; + EBSEA = derive2 { name="EBSEA"; version="1.18.0"; sha256="0f0j7p96sph909ffh5pa84vsg90wcvzlfnppkhx8kgnrw43jmwsg"; depends=[DESeq2 EmpiricalBrownsMethod]; }; + EBSeq = derive2 { name="EBSeq"; version="1.30.0"; sha256="1x2489xaqg85v7n3yhqs0nh9ha6dn4m167dkc6akzig4xivwjjny"; depends=[blockmodeling gplots testthat]; }; + EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.24.0"; sha256="0192j5bjqskac96c0lf8y6kj8vzgl7xdfa1cxgf5pyaxd65pq805"; depends=[EBSeq]; }; + EBarrays = derive2 { name="EBarrays"; version="2.54.0"; sha256="1r2dl19my1hqkq01fqk48pk3agb98vgrplj56kb4srhz2xm0w9pd"; depends=[Biobase cluster lattice]; }; + EBcoexpress = derive2 { name="EBcoexpress"; version="1.34.0"; sha256="0r394l68h30r9rzijgvyjgwlv92ih89bivlr6rvp99hfaf53rn3w"; depends=[EBarrays mclust minqa]; }; + EDASeq = derive2 { name="EDASeq"; version="2.24.0"; sha256="0fznj7lsgkss1svv4rq8g87s1gmnbd7hccim41dv1c2w2nl0n2ip"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics BiocManager biomaRt Biostrings GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; + EDDA = derive2 { name="EDDA"; version="1.28.0"; sha256="1mnra2r790jb29x7bc1y0p9l9kxwnq683mah8mjs5yxnd4pxc301"; depends=[baySeq edgeR Rcpp ROCR snow]; }; + EGAD = derive2 { name="EGAD"; version="1.18.0"; sha256="0bg74jydh3jpdr41fah6ir2lsb24wcicf42lvfkp0fj5i11j52p2"; depends=[arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS plyr RColorBrewer RCurl zoo]; }; + EGSEA = derive2 { name="EGSEA"; version="1.18.1"; sha256="1fslw9wgkr6fgy7p0awizlvx6vc2qxq47w5fksz5q6d79gd8hc08"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 Glimma globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; }; + ELBOW = derive2 { name="ELBOW"; version="1.26.0"; sha256="02g3cqvg529iks5kn7zzxv1fa7hxiibhfb69djkyxnlvhrg0ylhj"; depends=[]; }; + ELMER = derive2 { name="ELMER"; version="2.14.0"; sha256="1s6k2qiy65c0jvmnjnw6gibjf892lb930pihmx93cgw3ly593v90"; depends=[biomaRt circlize ComplexHeatmap DelayedArray doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggpubr ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr progress purrr readr reshape reshape2 rmarkdown rtracklayer rvest S4Vectors scales stringr SummarizedExperiment TCGAbiolinks tibble tidyr xml2]; }; + EMDomics = derive2 { name="EMDomics"; version="2.20.0"; sha256="08n46wbca76bs1wi26c8j5a0mk3q7blljfpxn7ka2balcxry56vi"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; + ENCODExplorer = derive2 { name="ENCODExplorer"; version="2.16.0"; sha256="1chyq51393dlc42k8bjap62lgjw8c75h2y5xl8v5k9x0np40ahc7"; depends=[AnnotationHub data_table dplyr ENCODExplorerData GenomeInfoDb GenomicRanges jsonlite RCurl rtracklayer S4Vectors stringi stringr tidyr]; }; + ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.38.0"; sha256="04wrxsplqc1rif0xzfgdg46lk730mc0z055wiw3inxcqp00b2s9h"; depends=[rJava XML]; }; + ENmix = derive2 { name="ENmix"; version="1.26.10"; sha256="0372ss40rcdvj5qs8mfwxpc3fl905ywx99hg6s0870r1minz6vh5"; depends=[AnnotationHub Biobase doParallel dynamicTreeCut ExperimentHub foreach genefilter geneplotter gplots gtools illuminaio impute IRanges irr matrixStats minfi preprocessCore quadprog RPMM S4Vectors SummarizedExperiment]; }; + ERSSA = derive2 { name="ERSSA"; version="1.8.0"; sha256="1f5wwl91byzh7v1z49l1a0lyfyc34lpzzy38q9f0rmc2xp93kb99"; depends=[BiocParallel DESeq2 edgeR ggplot2 plyr RColorBrewer]; }; + EasyqpcR = derive2 { name="EasyqpcR"; version="1.31.0"; sha256="0lb2px789668fr1gxghycy7lbdkpwmippv6xmmwws6rbanvfd6v4"; depends=[matrixStats plotrix plyr]; }; + EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.18.0"; sha256="0cxdjdn94vn1zhdpf17nxr7q4avq293026pwi0w7q139gll8x8x2"; depends=[]; }; + EnMCB = derive2 { name="EnMCB"; version="1.2.2"; sha256="0h00hwi607lzfkyi4jvxgg2dz9q4ly6s92xvi2a6jlnwdqn0gjq3"; depends=[doParallel foreach ggplot2 glmnet IlluminaHumanMethylation450kanno_ilmn12_hg19 minfi rms survival survivalROC survivalsvm]; }; + EnhancedVolcano = derive2 { name="EnhancedVolcano"; version="1.8.0"; sha256="17an3378h8cajh9y8nghh56s653ry80xbdqbm7bnkgv70ak60kgy"; depends=[ggalt ggplot2 ggrastr ggrepel]; }; + EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.20.0"; sha256="0r95hvwhwhq3777fl54514bjhkwy9chxagwbh5jgr3visa17n3mj"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; + EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.20.7"; sha256="0f1qivmkjihhhzkikacap3azq820mirp80pcrmygpjchx1g4yc87"; depends=[AnnotationDbi BiocFileCache BiocManager edgeR GO_db graph graphite GSEABase hwriter KEGGgraph KEGGREST limma pathview Rgraphviz S4Vectors safe SPIA SummarizedExperiment]; }; + EpiDISH = derive2 { name="EpiDISH"; version="2.6.1"; sha256="0r0jszbi20556sdqkb8zhsrdigcsp09kq4ldxp9xlixm8xhm6smv"; depends=[e1071 locfdr MASS Matrix matrixStats quadprog stringr]; }; + EpiTxDb = derive2 { name="EpiTxDb"; version="1.2.1"; sha256="0x8lbxw9jwxym97xn5x9zxzqhxqbgn2zfv3ky7vdjfv4vy4wb1v9"; depends=[AnnotationDbi BiocFileCache BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges httr IRanges Modstrings RSQLite S4Vectors tRNAdbImport xml2]; }; + EventPointer = derive2 { name="EventPointer"; version="2.8.0"; sha256="05z4nj85cx01ic654lywgns60px06jwxk612822yl2ihpw2a14rs"; depends=[affxparser Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg38 cobs doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges graph igraph IRanges limma MASS Matrix matrixStats nnls prodlim qvalue RBGL rhdf5 S4Vectors SGSeq stringr SummarizedExperiment]; }; + ExCluster = derive2 { name="ExCluster"; version="1.8.0"; sha256="0albmhq2pmlrpip51jxhbs96rgrikcbd6hdzsxz7cfkf2lv3pl8p"; depends=[GenomicRanges IRanges matrixStats Rsubread rtracklayer]; }; + ExiMiR = derive2 { name="ExiMiR"; version="2.32.0"; sha256="04gmd3021za54w1gihzd3k73xbrad5yqxplckrj43rh87g5vpr3f"; depends=[affy affyio Biobase limma preprocessCore]; }; + ExperimentHub = derive2 { name="ExperimentHub"; version="1.16.1"; sha256="1iyf052hh2dhlwzwwrj571cwr3hd9wp2j915sqg77x6jn40wjr1g"; depends=[AnnotationHub BiocFileCache BiocGenerics BiocManager curl rappdirs S4Vectors]; }; + ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.16.1"; sha256="0h8lh40agsx8d4hj1h1pb4adzzs2k4zlbsxh6ji35w99cgk9dlwh"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocManager biocViews curl DBI ExperimentHub graph httr S4Vectors]; }; + ExperimentSubset = derive2 { name="ExperimentSubset"; version="1.0.0"; sha256="0kkf8cbb9a8qpx0ddhdkjjy029zr1l40cil4z0zyq0la5hfxi63f"; depends=[Matrix SingleCellExperiment SummarizedExperiment]; }; + ExploreModelMatrix = derive2 { name="ExploreModelMatrix"; version="1.2.0"; sha256="1bn0vl658qcxrxxjn8qhrfmzsff7pxcfbz38n22yrf9zl6wdf43l"; depends=[cowplot dplyr DT ggplot2 limma magrittr MASS rintrojs S4Vectors scales shiny shinydashboard shinyjs tibble tidyr]; }; + ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.18.0"; sha256="0m0w3q6kgyd5dfpgp2h7v2b3z35ivvhij5hjgrcwci5s4328q74x"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; }; + ExpressionView = derive2 { name="ExpressionView"; version="1.42.0"; sha256="1hkp39hsv3x9s9ayhxjqpaglryxff9k1avl14imrsz1ajrnzpqys"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; }; + FCBF = derive2 { name="FCBF"; version="1.8.0"; sha256="0737ps759g38j091pbxap150xkzmv2gq4k32wbs9pgjylzr4p7wi"; depends=[ggplot2 gridExtra mclust pbapply SummarizedExperiment]; }; + FELLA = derive2 { name="FELLA"; version="1.10.0"; sha256="0z9s7aiyp42lhic2qpwacapy204agb2yjbmmf0yqnfgvgxyyqa49"; depends=[igraph KEGGREST Matrix plyr]; }; + FGNet = derive2 { name="FGNet"; version="3.24.0"; sha256="0icfmk4anhdqwabvyv01hp7vn0684v56iqqr0mc35whd70l7anws"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; + FISHalyseR = derive2 { name="FISHalyseR"; version="1.24.0"; sha256="0jsl2sa3hzs9hbv9jswg5wq1nhap23lidxdimkx9m9y20gsfc3ch"; depends=[abind EBImage]; }; + FRASER = derive2 { name="FRASER"; version="1.2.1"; sha256="083ibz24ziqz8hxpi84zf8qrwfpj4y2b6q7ia2wzx5gxj9z2nmip"; depends=[AnnotationDbi BBmisc Biobase BiocGenerics BiocParallel biomaRt BSgenome cowplot data_table DelayedArray DelayedMatrixStats extraDistr generics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel HDF5Array IRanges matrixStats OUTRIDER pcaMethods pheatmap plotly PRROC R_utils RColorBrewer Rcpp RcppArmadillo rhdf5 Rsamtools Rsubread S4Vectors SummarizedExperiment tibble VGAM]; }; + FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.26.0"; sha256="0an707fgsj89b2cjilyv4vpjm0a0w49brmwksm4dzbp2yjdlx7fc"; depends=[fda MASS]; }; + FScanR = derive2 { name="FScanR"; version="1.0.0"; sha256="1s62j948p3sp5ljx883g5h6s7c0m5q2wrmajypk50bbn6l9ymjdp"; depends=[]; }; + FamAgg = derive2 { name="FamAgg"; version="1.18.0"; sha256="1a3z7ipjnz23lfsgiin6brd3dsyvcz01pv0r8pgdvz94q5lih3ns"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; }; + FastqCleaner = derive2 { name="FastqCleaner"; version="1.8.0"; sha256="1vsc463jn30lp0py178ai35mzk62qscbvvaswwqkxvr641vnh0wp"; depends=[Biostrings DT htmltools IRanges Rcpp S4Vectors shiny shinyBS ShortRead]; }; + FilterFFPE = derive2 { name="FilterFFPE"; version="1.0.0"; sha256="0r9gr4sprcr16yk1hw1283cczhpf5aidss9iv26hsfbzjfkrha38"; depends=[doParallel foreach GenomicRanges IRanges Rsamtools S4Vectors]; }; + FindMyFriends = derive2 { name="FindMyFriends"; version="1.20.0"; sha256="1251g9p326mslxm9wrq7h1lixf16bfknfi4mvzzmr34m3afd65f2"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; + FitHiC = derive2 { name="FitHiC"; version="1.16.0"; sha256="1sdfkqc6s7m9whkzr0mllzzfjzhj2g54ncjwxj8q0azjgszrfwd2"; depends=[data_table fdrtool Rcpp]; }; + FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.22.0"; sha256="12i8v1p1qp3schkr86j8ic9v88lcn7l9gp56r6p44rn7w0d6a8d8"; depends=[jsonlite RCurl XML]; }; + FlowSOM = derive2 { name="FlowSOM"; version="1.22.0"; sha256="0gydp6q6zqkadw356k9br646zfynz8gk9ckbx9d297x503j5sgwf"; depends=[BiocGenerics ConsensusClusterPlus CytoML flowCore flowWorkspace igraph RColorBrewer tsne XML]; }; + FoldGO = derive2 { name="FoldGO"; version="1.8.0"; sha256="0xzmmr5amgpblfyk00q35knp8yg624rr0splxal9n7dlw7908fjc"; depends=[ggplot2 tidyr topGO]; }; + FourCSeq = derive2 { name="FourCSeq"; version="1.24.0"; sha256="1rwdphcj26xis47n8j1fiyc3k3qbsgn0bhf5bhgy5vm11yqyvicb"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; }; + FunChIP = derive2 { name="FunChIP"; version="1.16.0"; sha256="173zs1gmsg059xd4115v7xddn99raz632xxhcawz168skv8kacdw"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; }; + FunciSNP = derive2 { name="FunciSNP"; version="1.34.0"; sha256="1mjxqib9mjnabgr1b5bxm3bjhzb0jrv7cgizdldsijz69abzdzm9"; depends=[Biobase BiocGenerics ChIPpeakAnno GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + GA4GHclient = derive2 { name="GA4GHclient"; version="1.14.0"; sha256="0bv39vqp6pw90hx2iwwkxz8ap5qsndyzm0c7ik30yqkmmlx16p7z"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; }; + GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.12.0"; sha256="1gx8ay0bj1mgci14k2vgvycq9x3220kfb5gvi0m1g4h0xj7dyas1"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; }; + GAPGOM = derive2 { name="GAPGOM"; version="1.6.0"; sha256="0hr027h6bav25x2iimlk02xyysm9yw0lj3989rrhsg5y16ja83cn"; depends=[AnnotationDbi Biobase BiocFileCache data_table dplyr fastmatch GEOquery GO_db GOSemSim graph igraph magrittr Matrix matrixStats org_Hs_eg_db org_Mm_eg_db plyr RBGL]; }; + GARS = derive2 { name="GARS"; version="1.10.0"; sha256="1xfms19a8xbwpyjnfnm3kjqah00rlyd8r3rd5phsa837plg76pa4"; depends=[cluster DaMiRseq ggplot2 MLSeq SummarizedExperiment]; }; + GAprediction = derive2 { name="GAprediction"; version="1.16.0"; sha256="19y2xyzzh2y0jy1j3d9y3ddc9j98g80znvr7f01wxykz6p67x9lw"; depends=[glmnet Matrix]; }; + GCSConnection = derive2 { name="GCSConnection"; version="1.2.0"; sha256="02qn63aayzxc3idp6wfvq7v657w9007pgdjdfma7blkx3v3sdnf3"; depends=[googleAuthR googleCloudStorageR httr jsonlite Rcpp]; }; + GCSFilesystem = derive2 { name="GCSFilesystem"; version="1.0.0"; sha256="00fsmfy3ikpmwb7184gv51l1vmgqari0avcjzzi6fbrwsz64fp1b"; depends=[]; }; + GCSscore = derive2 { name="GCSscore"; version="1.4.0"; sha256="1jm38qdjksgac4ywjwa69k9qxl0lxw3grk4vygd81z9yksh797da"; depends=[affxparser Biobase BiocManager data_table devtools dplR RSQLite stringr]; }; + GDCRNATools = derive2 { name="GDCRNATools"; version="1.10.1"; sha256="014wid50n7qm9y2vy8yib5lgd5rczca1gi6nm9h991dm4d6g3adr"; depends=[BiocParallel biomaRt clusterProfiler DESeq2 DOSE DT edgeR GenomicDataCommons ggplot2 gplots jsonlite limma org_Hs_eg_db pathview rjson shiny survival survminer XML]; }; + GDSArray = derive2 { name="GDSArray"; version="1.10.1"; sha256="1i7ac17ls6ij926hj7jiigd1mfk9gp04z53lnjmnikmmrd20g9x2"; depends=[BiocGenerics DelayedArray gdsfmt S4Vectors SeqArray SNPRelate]; }; + GEM = derive2 { name="GEM"; version="1.16.0"; sha256="0s3h85xsyld45ma9h8y9r6b8j6kkx3fm0gwac6rspdbw683lydzs"; depends=[ggplot2]; }; + GENESIS = derive2 { name="GENESIS"; version="2.20.1"; sha256="0wz60mn23l4r41r4n3miw7l2qmx92dd4lq817hglp4vs22y8kh57"; depends=[Biobase BiocGenerics data_table foreach gdsfmt GenomicRanges GWASTools igraph IRanges Matrix reshape2 S4Vectors SeqArray SeqVarTools SNPRelate]; }; + GENIE3 = derive2 { name="GENIE3"; version="1.12.0"; sha256="1z7qkv0cgdx2plhc7xdz6s7vwdjhzcdadi35wg3fl6xpids5njf5"; depends=[reshape2]; }; + GEOmetadb = derive2 { name="GEOmetadb"; version="1.52.0"; sha256="0hi7rfnrzf52bwckkx5rjs19pc3kwa3vg8qmzpd5kk7hc2h9rrwh"; depends=[GEOquery RSQLite]; }; + GEOquery = derive2 { name="GEOquery"; version="2.58.0"; sha256="1jzhgnd404wkz978vbqzwbgixr7yk98c7s9q1fzlyax4f8l0cpi4"; depends=[Biobase dplyr httr limma magrittr readr tidyr xml2]; }; + GEOsubmission = derive2 { name="GEOsubmission"; version="1.42.0"; sha256="1wp4ikpgy40zyz6ajkhc188q22xhdl6z794zjxmw5zm43dbgzpag"; depends=[affy Biobase]; }; + GEWIST = derive2 { name="GEWIST"; version="1.34.0"; sha256="16my87xnhij4w3qz18lsaarn48h11ca5qqyfn4s3fj9jr6pyfr32"; depends=[car]; }; + GGBase = derive2 { name="GGBase"; version="3.52.0"; sha256="1g3rs0d09knvhm6ni20pfbfmilpmc5xx4l7jys29nw8xhl00d8hv"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; }; + GGPA = derive2 { name="GGPA"; version="1.2.0"; sha256="0ypjalarv0d7n3xs5n7n66g68dk24s33b8nq150kihxvlpzxr99l"; depends=[GGally matrixStats network Rcpp RcppArmadillo scales sna]; }; + GGtools = derive2 { name="GGtools"; version="5.25.3"; sha256="10n2aw2h187f7vxfm18qzxh4ci6qr0k5gd1wc1aqdjqdkfaqxzs0"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; + GIGSEA = derive2 { name="GIGSEA"; version="1.8.0"; sha256="1cvmgfzchs69x6ndsl3l73is076g4a572x75ghpfdga8wvavqsfn"; depends=[locfdr MASS Matrix]; }; + GISPA = derive2 { name="GISPA"; version="1.14.0"; sha256="0l6b6izqlr9bp2nknamz9gn160mvbpvpkcf5npsq8lqpqy15l29r"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; }; + GLAD = derive2 { name="GLAD"; version="2.54.0"; sha256="06nslbq7bqpib62928vbxmr8yda8370nf5ikfhzpshdg1m1pwwmj"; depends=[aws]; }; + GMRP = derive2 { name="GMRP"; version="1.18.0"; sha256="0gdh4ch2pks72sn7zqrzfr9mb894d4cb6340bmrvyy4qqrzrwf6h"; depends=[diagram GenomicRanges plotrix]; }; + GNET2 = derive2 { name="GNET2"; version="1.6.0"; sha256="1lwi5dkhg1kzf1qqkrjs0bgzz8zg499ia9y5jhzq94xk877wqbbd"; depends=[DiagrammeR dplyr ggplot2 igraph matrixStats Rcpp reshape2 SummarizedExperiment xgboost]; }; + GOSemSim = derive2 { name="GOSemSim"; version="2.16.1"; sha256="1hk1626172scja2gr6axy98czblz0zljiqgqaknsv2xj6frhxcgs"; depends=[AnnotationDbi GO_db Rcpp]; }; + GOSim = derive2 { name="GOSim"; version="1.28.0"; sha256="0z6i3v4j78ghf6ld3xn5jg1qbizllv426bg4awd9220p5lqb0hal"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; + GOTHiC = derive2 { name="GOTHiC"; version="1.26.0"; sha256="181nvinvpqyl2g56qnylfq6827z0r1rqlg0avygjvfzk8m9njyl7"; depends=[BiocGenerics BiocManager Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; + GOexpress = derive2 { name="GOexpress"; version="1.24.0"; sha256="16kgynn94z9790v6xkpcbr6wzdmfj58qv4yy8vmsii6f6q36l7yl"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; }; + GOfuncR = derive2 { name="GOfuncR"; version="1.10.0"; sha256="1ah4v2jj508wjsmrncw58wjq2cyris7bnzfw6kr7jp9n4dvn33mq"; depends=[AnnotationDbi GenomicRanges gtools IRanges mapplots Rcpp vioplot]; }; + GOpro = derive2 { name="GOpro"; version="1.16.0"; sha256="1br6rhq6h37kxy8dlf5ky37n6slfmgs8kfj2yzxi2scgw43i3z2r"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; }; + GOstats = derive2 { name="GOstats"; version="2.56.0"; sha256="18q8p0fv9fl2r6zjxknfjwqxr69dlyxy6c8amzn6c6dwjq1cxk6j"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; }; + GOsummaries = derive2 { name="GOsummaries"; version="2.26.0"; sha256="01z37g9gdkjbc88ll0dna7cy23jpmzdnbkhncfjdr3f06vcf7c94"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; + GPA = derive2 { name="GPA"; version="1.2.0"; sha256="12z9c6n2l3mm0v0dnx9z9ggy0gpwxr7ycpc6hqq8hz9rnid4rq34"; depends=[DT ggplot2 ggrepel plyr Rcpp shiny shinyBS vegan]; }; + GRENITS = derive2 { name="GRENITS"; version="1.42.0"; sha256="1n7q7n1j6g8cc35ls2kdnl05xkfl5a39bkc7q6n4mwky2l6w450c"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; + GRmetrics = derive2 { name="GRmetrics"; version="1.16.0"; sha256="0grpar3aqnm9dq1imp46zbjkqvi8q6a4l01kpkpl12jz142rjm87"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; }; + GRridge = derive2 { name="GRridge"; version="1.14.0"; sha256="0z4izc9wzcb2wp9ldx93x8v448c1ryqbqlafzrd8zwbp9d6zqdyj"; depends=[glmnet graph Iso mvtnorm penalized survival]; }; + GSALightning = derive2 { name="GSALightning"; version="1.18.0"; sha256="02gnz4jfs609sccynk29yr5sm6jbjv6m862rqlpkmasw837icd02"; depends=[data_table Matrix]; }; + GSAR = derive2 { name="GSAR"; version="1.24.0"; sha256="002jsxgjjxm83z7lw6x326pn2zcrmpzb50ihvd4n7b6ff5172nyb"; depends=[igraph]; }; + GSCA = derive2 { name="GSCA"; version="2.20.0"; sha256="1pgb5hyq7ljxk7z4dazb6r0d1qzygcswgxhiwqqdh0s4imhwqbfz"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; + GSEABase = derive2 { name="GSEABase"; version="1.52.1"; sha256="0dawh1kjmf6921jm77j2s2phrq5237pjc4sdh8fkln89gf48zx6i"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; + GSEABenchmarkeR = derive2 { name="GSEABenchmarkeR"; version="1.10.1"; sha256="1y98941mk5zbriyn9azg4gg06d6949drb230j5dpys6q76027xwi"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache BiocParallel edgeR EnrichmentBrowser ExperimentHub KEGGandMetacoreDzPathwaysGEO KEGGdzPathwaysGEO S4Vectors SummarizedExperiment]; }; + GSEAlm = derive2 { name="GSEAlm"; version="1.50.0"; sha256="1qpj6xgdbb2ajizsh98gsk8lks8c5zrzxgvmr5l5fsschspfvyff"; depends=[Biobase]; }; + GSEAmining = derive2 { name="GSEAmining"; version="1.0.0"; sha256="1lms7q0lazdqwf8n5mldz9kbyqzyyvgkvccnbbyzsk6vn4jn7p3s"; depends=[dendextend dplyr ggplot2 ggwordcloud gridExtra rlang stringr tibble tidytext]; }; + GSRI = derive2 { name="GSRI"; version="2.38.0"; sha256="19j81n1bxc8amnhrg03200y0f8397f15yhzqd8lzhp6k0nyigqfm"; depends=[Biobase fdrtool genefilter GSEABase les]; }; + GSReg = derive2 { name="GSReg"; version="1.24.0"; sha256="0hfjd0s8p6cgs7fq9zaqyiibid1kv9qg66rhyw8qk3yxgvxs70l5"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; }; + GSVA = derive2 { name="GSVA"; version="1.38.2"; sha256="1b6i6l94mr7xciq4grrjf37zixny2600y6kmvn74n5h23f97npxk"; depends=[Biobase BiocGenerics BiocParallel GSEABase IRanges S4Vectors SummarizedExperiment]; }; + GSgalgoR = derive2 { name="GSgalgoR"; version="1.0.0"; sha256="0d8kbgxfzs9djq49167bckvni3fvdg7ggpfd1gg2i517g96p5yb4"; depends=[cluster doParallel foreach matchingR nsga2R proxy survival]; }; + GUIDEseq = derive2 { name="GUIDEseq"; version="1.20.0"; sha256="1mm231h8pm1fi9x3zqky8x703wkzqp2ml3g004n0xs9jklifqwqz"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; + GWAS_BAYES = derive2 { name="GWAS.BAYES"; version="1.0.0"; sha256="15s52awci72czwhd61vrdfzs1jx5mj0ddzwgsrmz3dnyb3n35kqk"; depends=[caret doParallel GA ggplot2 Matrix memoise Rcpp RcppEigen reshape2]; }; + GWASTools = derive2 { name="GWASTools"; version="1.36.0"; sha256="16pw7qazwswm05im9yk7ncbcp8gq3w4hff96v215pfp3z11d7rv6"; depends=[Biobase data_table DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; + GWENA = derive2 { name="GWENA"; version="1.0.1"; sha256="1fyidx91rdlj33k5zz8sk7h0gz2kcmzgqn5vl19y95rr7qphkzds"; depends=[dplyr dynamicTreeCut ggplot2 gprofiler2 igraph magrittr matrixStats NetRep purrr RColorBrewer rlist stringr SummarizedExperiment tibble tidyr WGCNA]; }; + GateFinder = derive2 { name="GateFinder"; version="1.10.0"; sha256="19z58fbj8chxx6n8kvqq9y0a9afd8cmia9xjap52z133naakdjqb"; depends=[diptest flowCore flowFP mvoutlier splancs]; }; + GenVisR = derive2 { name="GenVisR"; version="1.22.1"; sha256="1b675d9x9ngvwabs4p7c0m5gy3y3middqgi5wkx0mfsvf6jn4s6f"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome data_table DBI FField GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales VariantAnnotation viridis]; }; + GeneAccord = derive2 { name="GeneAccord"; version="1.8.0"; sha256="0rr3rk690m2r68nhf26a2ar28p2zllaq4p9nbq379ih0wv0d27bs"; depends=[biomaRt caTools dplyr ggplot2 ggpubr gtools magrittr maxLik RColorBrewer reshape2 tibble]; }; + GeneAnswers = derive2 { name="GeneAnswers"; version="2.32.0"; sha256="1bki62hq54ki6vm83yd72i7sqrr4lis5fd4p9lfcjp7vr008ch23"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; + GeneBreak = derive2 { name="GeneBreak"; version="1.20.0"; sha256="118pl66a70ykl7wp3jvwfs6gjyfb4iim45bczb8ij0b2x4kz16v8"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; + GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.36.0"; sha256="01y45hxfkg08ayx9ca5bwdkc8psx0w6gdgq8k2dlx8j1y9b2z0ci"; depends=[Biobase]; }; + GeneGA = derive2 { name="GeneGA"; version="1.40.0"; sha256="0i89q3sfq2hbh72dzjhc1xdaddg7l440fnsy5ikjsm3nq9bc1jm0"; depends=[hash seqinr]; }; + GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.16.0"; sha256="1xb47cb5dappw04nr6wg0xfbivhhkp9h2nrsx57chva46s7dsyjv"; depends=[data_table FactoMineR GenomicRanges GGtools igraph IRanges kernlab mvtnorm Rsamtools snpStats]; }; + GeneMeta = derive2 { name="GeneMeta"; version="1.62.0"; sha256="19ai4mjjyb0fa36y3p2hyxbbdrdamj8ixqyc7vlyyhgrxip4yjga"; depends=[Biobase genefilter]; }; + GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.32.0"; sha256="0b7fffhcvg80ryk7ba76n9pscxlc935plbyr4ppi4k06qy9si6k0"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; }; + GeneOverlap = derive2 { name="GeneOverlap"; version="1.26.0"; sha256="0bvh00n4fx0h1m83bypib3jvln1ihcv77ywrrn9xm20y73gymhkh"; depends=[gplots RColorBrewer]; }; + GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.46.0"; sha256="0513b3y54bwmlp81wqads7sqqiipb8rsj63rxjkllx7viw8877d7"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; }; + GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.34.0"; sha256="0w3mw1l6p5r0az4g069xs32h0w2xl77mrcbh1c062klrawfr2kl3"; depends=[Biobase limma MASS]; }; + GeneStructureTools = derive2 { name="GeneStructureTools"; version="1.10.0"; sha256="03f10hx8rxm3icfn88d1al48ynvsq5lakf3yfzyy8iq0ia50pnqm"; depends=[Biostrings BSgenome_Mmusculus_UCSC_mm10 data_table GenomicRanges Gviz IRanges plyr rtracklayer S4Vectors stringdist stringr]; }; + GeneTonic = derive2 { name="GeneTonic"; version="1.2.0"; sha256="1i7bdasp7plja2idhagh01wdkdgg6idvlk1b1mswfrgzkr0mrqyh"; depends=[AnnotationDbi bs4Dash colorspace ComplexHeatmap dendextend DESeq2 dplyr DT dynamicTreeCut expm ggforce ggplot2 ggrepel GO_db igraph matrixStats plotly RColorBrewer rintrojs rlang rmarkdown S4Vectors scales shiny shinycssloaders shinyWidgets SummarizedExperiment tidyr viridis visNetwork]; }; + GeneticsPed = derive2 { name="GeneticsPed"; version="1.52.0"; sha256="08by25v4srhql1ikakv1aki5cg284k2rsq4fn9g95xk5amc4bxgh"; depends=[gdata genetics MASS]; }; + GenoGAM = derive2 { name="GenoGAM"; version="2.8.0"; sha256="1kryqm625vljsj392dhsvcvy67y2g4jp39h5iny3hkk6m77jkkr2"; depends=[BiocParallel Biostrings data_table DelayedArray DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges HDF5Array IRanges Matrix Rcpp RcppArmadillo rhdf5 Rsamtools S4Vectors sparseinv SummarizedExperiment]; }; + GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.26.7"; sha256="0fp7sp3jmc2a1hk4r624lfavx8gc2ik3lv43ksc2jmspg6cvh516"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; }; + GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.26.0"; sha256="1q95px6s6snsax4ax955zzpdlrwp5liwf70wqq0lrk9mp6lq0hbr"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; + GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.14.0"; sha256="1smwd6y2h7niv9lmfl9cyfqvwd5a5bagasr8zsk9skymyccvkqqk"; depends=[dplyr GenomicRanges httr IRanges jsonlite magrittr rappdirs readr rlang S4Vectors SummarizedExperiment tibble xml2]; }; + GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.42.3"; sha256="168cf261vmcqffbzassavkjyz9a2af0l6zbv9cagkx6b1qrk3siz"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; + GenomicFiles = derive2 { name="GenomicFiles"; version="1.26.0"; sha256="0awnf0m1pz7cw9wvh9cfxz9k7xm6wnvjm7xbxf139lrhd4nlyqjz"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges MatrixGenerics Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.24.0"; sha256="0ad0a5cadchx1rkqj4cc8k0y1zf34jgp1406hvik5zabr7xijkbd"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; + GenomicOZone = derive2 { name="GenomicOZone"; version="1.4.1"; sha256="14hqm7aprcmfsqk1fgdmg4cdbj9yv31n1svcs41pv50ydwfpxbkb"; depends=[biomaRt Ckmeans_1d_dp GenomeInfoDb GenomicRanges ggbio ggplot2 gridExtra IRanges lsr plyr Rdpack S4Vectors]; }; + GenomicRanges = derive2 { name="GenomicRanges"; version="1.42.0"; sha256="0j4py5g6pdj35xhlaqhxxhg55j9l4mcdk3yck4dgyavv5f2dh24i"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; + GenomicScores = derive2 { name="GenomicScores"; version="2.2.0"; sha256="1492xirsgag2dsr6ys9wm3a65sq826p9hcdg3b4dm1wbxgdfx6jr"; depends=[AnnotationHub Biobase BiocFileCache BiocGenerics BiocManager Biostrings DelayedArray GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors XML]; }; + GenomicTuples = derive2 { name="GenomicTuples"; version="1.24.0"; sha256="0jdmzadgpmkrbw69v4iq0amkh5cphg4gw1mvwqw5764a3hr0kwvv"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; + GladiaTOX = derive2 { name="GladiaTOX"; version="1.6.1"; sha256="190zikr20xra0jz06hizl0ac38xxcvfm2ps1v7f3lxsgrgr2s7gn"; depends=[brew data_table DBI ggplot2 ggrepel numDeriv RColorBrewer RCurl RJSONIO RMySQL RSQLite stringr tidyr XML xtable]; }; + Glimma = derive2 { name="Glimma"; version="2.0.0"; sha256="0gy30v30lw27frhmw39pzacqzrv2vwj5rsp6gb3yifllrahdiffv"; depends=[DESeq2 edgeR htmlwidgets jsonlite limma S4Vectors SummarizedExperiment]; }; + GlobalAncova = derive2 { name="GlobalAncova"; version="4.8.0"; sha256="0hgw1gqy24z8aiwxkyzqy8fpp70z15i9d7wj08296dr79rpi80dh"; depends=[annotate AnnotationDbi Biobase corpcor dendextend globaltest GSEABase VGAM]; }; + GmicR = derive2 { name="GmicR"; version="1.4.0"; sha256="11j9gf3pllk3msyx113xdklw0wfkipqxal31isgld57rshzr9qrx"; depends=[AnnotationDbi ape bnlearn Category data_table doParallel DT foreach GOstats gRain gRbase GSEABase org_Hs_eg_db org_Mm_eg_db reshape2 shiny WGCNA]; }; + GraphAT = derive2 { name="GraphAT"; version="1.62.0"; sha256="00jc9irdxvkz1qr7ijpfj1nw9mxylgjfgwy4v24s448cfqhysbmr"; depends=[graph MCMCpack]; }; + GraphAlignment = derive2 { name="GraphAlignment"; version="1.54.0"; sha256="1l68jwzwjajl0gqj6lbnczi3r5g3wh2sy1prf7vlg00z7lkzailp"; depends=[]; }; + GraphPAC = derive2 { name="GraphPAC"; version="1.32.0"; sha256="0ivlspdq0b5ggxjiwx86zp9r966ypg1p2pf7cvgwc072sxdmc4zl"; depends=[igraph iPAC RMallow TSP]; }; + GreyListChIP = derive2 { name="GreyListChIP"; version="1.22.0"; sha256="1d1yvza1aw3vs3di6mrra5l52ig0p9bpzprrqvknjaz5i4yb8ma6"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; }; + Guitar = derive2 { name="Guitar"; version="2.6.0"; sha256="0lvfrpgrvmrz4f4qmsii70hw10h72zh1g1alv2sf6a6ixhndm0mz"; depends=[AnnotationDbi dplyr GenomicFeatures GenomicRanges ggplot2 knitr magrittr rtracklayer]; }; + Gviz = derive2 { name="Gviz"; version="1.34.1"; sha256="0bmlfz9ri1gkwyl605a2hqi5b8jdpvynrxwghwmrsd657ip6c7n1"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; + HCABrowser = derive2 { name="HCABrowser"; version="1.6.0"; sha256="0iw7zmq1yn6v4mksv2gamjp73hf41hwqwjgn52fzwgjhvih5qjhk"; depends=[AnVIL BiocFileCache dplyr googleAuthR httr readr rlang]; }; + HCAExplorer = derive2 { name="HCAExplorer"; version="1.4.0"; sha256="03id80rw3qqaclfgy0m14k970ayz034dhd6cfvgp28ydqdm5h06d"; depends=[BiocFileCache curl dplyr HCAMatrixBrowser httr jsonlite LoomExperiment plyr readr rlang S4Vectors tibble tidygraph vctrs xml2]; }; + HCAMatrixBrowser = derive2 { name="HCAMatrixBrowser"; version="1.0.1"; sha256="1fqc39sy2sn4m1cmxxbh1lavwvqrsmgwlfknh1q43c86mdmnqgh1"; depends=[AnVIL BiocFileCache digest dplyr httr jsonlite Matrix progress rlang SingleCellExperiment]; }; + HDF5Array = derive2 { name="HDF5Array"; version="1.18.1"; sha256="14v2adhwi0yac834g23kvfid740raclhmribzd28k10gsjk9cj7g"; depends=[BiocGenerics DelayedArray IRanges Matrix rhdf5 Rhdf5lib S4Vectors]; }; + HDTD = derive2 { name="HDTD"; version="1.24.0"; sha256="14cmhqkwkivzmp68i457x425bhlzrl1cbfldcka567hmgxpla1hn"; depends=[Rcpp RcppArmadillo]; }; + HELP = derive2 { name="HELP"; version="1.48.0"; sha256="1gdknw6ibnnjdr8qifr3kk3znpb99c2kz8cljdvl54rby0vz1qyc"; depends=[Biobase]; }; + HEM = derive2 { name="HEM"; version="1.62.0"; sha256="0gpnkjf1zqhmjali099frz1cswhgmjb42xrv74kcfajmbyrnnhmw"; depends=[Biobase]; }; + HIBAG = derive2 { name="HIBAG"; version="1.26.1"; sha256="08nm3bxga3plhg1kb3rpb00gh93npa3di6cg4q2q1yw4f79r67xl"; depends=[RcppParallel]; }; + HIPPO = derive2 { name="HIPPO"; version="1.2.0"; sha256="14sb6sznmal67dn56pamnaa4gyi0c0kvigwprja71ncrmzdqli4n"; depends=[dplyr ggplot2 ggrepel gridExtra irlba magrittr Matrix reshape2 rlang Rtsne SingleCellExperiment umap]; }; + HIREewas = derive2 { name="HIREewas"; version="1.8.0"; sha256="1r1qf1bj4v8cigijya01nxjqcfnisc885dj8jdzbryqb40zwjr3i"; depends=[gplots quadprog]; }; + HMMcopy = derive2 { name="HMMcopy"; version="1.32.0"; sha256="0x03sm64jhf6bxjpdy2aa4fzk9wj8i770schbyany1vsnw7ql4jb"; depends=[data_table]; }; + HPAStainR = derive2 { name="HPAStainR"; version="1.0.3"; sha256="09hl25jk928cq5wmmq2mivrbs4jwfqm7ra52416zb04cxhk586dn"; depends=[data_table dplyr scales shiny stringr tibble tidyr]; }; + HPAanalyze = derive2 { name="HPAanalyze"; version="1.8.1"; sha256="054irq7ppc0jx7r3lkry9vdvf2yyl8xsrjy1ac3ly05axm3j7l7m"; depends=[dplyr ggplot2 gridExtra openxlsx tibble xml2]; }; + HTSFilter = derive2 { name="HTSFilter"; version="1.30.1"; sha256="14ffhz8635pqj8yywng92rs1k7yljf4dvfj6i305s7hm07g4h437"; depends=[Biobase BiocParallel DESeq2 edgeR]; }; + HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.20.0"; sha256="1ylg881wyp4sjhzgd7wx9033b7lpszb4pa9bp02vnmg0322y0i6p"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; }; + HTqPCR = derive2 { name="HTqPCR"; version="1.44.0"; sha256="1fzjx6psr41naq9ycpnv3lxlgkiyrpn7r2wl1i4gz45f3lax0yji"; depends=[affy Biobase gplots limma RColorBrewer]; }; + Harman = derive2 { name="Harman"; version="1.18.0"; sha256="0kbi6g5ddsasklwbx15rdznh8xbai59zs87ci3f0iyzaryzly23k"; depends=[Rcpp]; }; + Harshlight = derive2 { name="Harshlight"; version="1.62.0"; sha256="1bvsyw1qxzlzs5drr91x20462mq5m0w359vmv6xjq3c2dxlg9l8g"; depends=[affy altcdfenvs Biobase]; }; + Heatplus = derive2 { name="Heatplus"; version="2.36.0"; sha256="0vp8y0242k6q07yjk4sg2w7mlk5pgzhjgqkxa79c5ypkyp095a8n"; depends=[RColorBrewer]; }; + HelloRanges = derive2 { name="HelloRanges"; version="1.16.0"; sha256="1a2y8f10w4kg1iw6dpkxy4s6bkjsgdzrb2s15v6f0ra4i362zcnw"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + Herper = derive2 { name="Herper"; version="1.0.2"; sha256="1b7pd01i7f67iqgcgvglzikk7znl6xjxk4wia595c6i9df17dr0y"; depends=[reticulate rjson withr]; }; + HiCBricks = derive2 { name="HiCBricks"; version="1.8.0"; sha256="1whh53a47rfc3zwxlhxix5vsxcidbjl5hkydi55h05vw2c4yp859"; depends=[BiocParallel curl data_table digest GenomeInfoDb GenomicRanges ggplot2 IRanges jsonlite R_utils R6 RColorBrewer readr reshape2 rhdf5 S4Vectors scales stringr tibble viridis]; }; + HiCcompare = derive2 { name="HiCcompare"; version="1.12.0"; sha256="1k9kcy7wl6fp6wmnkvyy7qjy54s0lam115kjgf3kkxndhsn6124c"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq rhdf5 S4Vectors]; }; + HiLDA = derive2 { name="HiLDA"; version="1.4.0"; sha256="197scxxcsvjh1dbzr743vr151fpq5xknzml26s1rm7y3cpa13dgh"; depends=[abind BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot forcats GenomicFeatures GenomicRanges ggplot2 R2jags Rcpp S4Vectors stringr tidyr TxDb_Hsapiens_UCSC_hg19_knownGene XVector]; }; + HiTC = derive2 { name="HiTC"; version="1.34.0"; sha256="1xbh36qgmzl8b6xq0hnl41li2x18yma50fq0v4dglh2ddn7as9iy"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; + HilbertCurve = derive2 { name="HilbertCurve"; version="1.20.0"; sha256="0srqi6f00l5m4c71s8m42whbh1v09v6bq13ahziill0g9p8n35ax"; depends=[circlize GenomicRanges HilbertVis IRanges png polylabelr]; }; + HilbertVis = derive2 { name="HilbertVis"; version="1.48.0"; sha256="17204m3bl3bphzfil1h0f2hrpvcf1pwn29bhw0q3kida2dpkx1xj"; depends=[lattice]; }; + HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.48.0"; sha256="0vyv0iqzgvwxd2sabsg60xyj61ia8jwnywi2pcgp5dnzmlfnvg5r"; depends=[HilbertVis]; }; + HumanTranscriptomeCompendium = derive2 { name="HumanTranscriptomeCompendium"; version="1.6.0"; sha256="12npxzdy7abzkf3zn80sm4h7wqp6narh2dik0mm228babpdl7f3w"; depends=[S4Vectors shiny ssrch SummarizedExperiment]; }; + HybridMTest = derive2 { name="HybridMTest"; version="1.34.0"; sha256="1a16d6jigy8w3yq2ipr2d6jdb310alii1acyf1h7l1vbc102q50b"; depends=[Biobase fdrtool MASS survival]; }; + IHW = derive2 { name="IHW"; version="1.18.0"; sha256="04szg3bj5cjixxcp8j3inmj0fzk2mg8gp2w2b33x0im8ik24qiw0"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; + ILoReg = derive2 { name="ILoReg"; version="1.0.0"; sha256="0lgz9ry8pqyrlp18dr6db1fciwn6vnfx31z1f01mwyn833hyicry"; depends=[aricode cluster cowplot dendextend DescTools doRNG doSNOW dplyr fastcluster foreach ggplot2 LiblineaR Matrix parallelDist pheatmap plyr reshape2 RSpectra Rtsne S4Vectors scales SingleCellExperiment SparseM SummarizedExperiment umap]; }; + IMAS = derive2 { name="IMAS"; version="1.14.0"; sha256="0fs9lczlm72y1x9j43y9hg70jplgfkwiy15i71gmj7lwhj44wqix"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; }; + IMMAN = derive2 { name="IMMAN"; version="1.10.0"; sha256="0ainxxgldgmmfn29j0bg6c6q95w8jkv57w9a4ga5vi21j15a0dwx"; depends=[Biostrings igraph seqinr STRINGdb]; }; + IMPCdata = derive2 { name="IMPCdata"; version="1.26.0"; sha256="1f57qz79w1c8ngnbwbbbi6qrrbq58270qxyk0yx85lq6v3rdw5pi"; depends=[rjson]; }; + INDEED = derive2 { name="INDEED"; version="2.4.0"; sha256="0fz4yd909mwxl3arlgxadcivh21khbvsyfvmhcnkb05kkg59b06d"; depends=[devtools glasso igraph visNetwork]; }; + INPower = derive2 { name="INPower"; version="1.26.0"; sha256="1y7n42j0h3psfg1cqdzwxdfnzi4kn4h7pyp838fbmhfqhj4q82x1"; depends=[mvtnorm]; }; + INSPEcT = derive2 { name="INSPEcT"; version="1.20.0"; sha256="1jymvi5mf7vhs58zfh290pacfswgvkw09rmbirmr24kxcgl30483"; depends=[Biobase BiocGenerics BiocParallel DESeq2 deSolve gdata GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges KernSmooth plgem pROC rootSolve Rsamtools rtracklayer S4Vectors shiny SummarizedExperiment TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + IONiseR = derive2 { name="IONiseR"; version="2.14.0"; sha256="0cfa64d3qv881sa9d665rfki91jaz2spg0zfrb24m37948qzk1lx"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; }; + IPO = derive2 { name="IPO"; version="1.16.0"; sha256="128am1hdrf7v2y32vvjjfisw7vw2ill6bssgq8mak5fl93cnpb7l"; depends=[BiocParallel CAMERA rsm xcms]; }; + IRanges = derive2 { name="IRanges"; version="2.24.1"; sha256="01mx46a82vd3gz705pj0kk4wpxg683s8jqxchzjia3gz00b4qw52"; depends=[BiocGenerics S4Vectors]; }; + ISAnalytics = derive2 { name="ISAnalytics"; version="1.0.11"; sha256="0fc8pyjjbj0mp6nmhxcksfk1380dx5irkgfsh0in99yyjgjq6ig1"; depends=[BiocParallel data_table dplyr forcats fs ggplot2 ggrepel htmltools lifecycle lubridate magrittr psych purrr reactable readr readxl rlang stringr tibble tidyr upsetjs zip]; }; + ISoLDE = derive2 { name="ISoLDE"; version="1.18.1"; sha256="17xxyqv0qbwrvc4jnrw7h2cr158ayx959xkcfsci0di5j8gph4g5"; depends=[]; }; + ITALICS = derive2 { name="ITALICS"; version="2.50.0"; sha256="14bvnn5kpqla52s7kard8fwzbav75hzh8q087xrn54ixbcwdaksg"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; + IVAS = derive2 { name="IVAS"; version="2.10.0"; sha256="00wvcgf9aczhrrz169gr91h7fd4816ncz9cz0br06vf9203s58px"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; }; + IWTomics = derive2 { name="IWTomics"; version="1.14.0"; sha256="02mvp2mnb7zlzmhmb9md82k8vcb47kaf5k4bd07024ag960nx5wm"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; }; + Icens = derive2 { name="Icens"; version="1.62.0"; sha256="1w94mvh8pai77h4fcaiyacmzs58n4kbiq6bm4z0hk24j1ywph3dr"; depends=[survival]; }; + IdeoViz = derive2 { name="IdeoViz"; version="1.26.0"; sha256="1k5c0skr6pvpcvkak9f0a088w5wsx4fl3jb9a76gyyni4nkj7djq"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; + IgGeneUsage = derive2 { name="IgGeneUsage"; version="1.4.0"; sha256="00102is1s2i7a9aar1mfc110i4aiqljmlsyzap9025q2rhrwcvcw"; depends=[Rcpp reshape2 rstan StanHeaders SummarizedExperiment]; }; + Imetagene = derive2 { name="Imetagene"; version="1.19.0"; sha256="1p8v64nnavxgliv4diswiz7rwaw6k815f79aidb161vpasdjz99k"; depends=[ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; }; + ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.18.1"; sha256="06clvgsii3zpx89lgxyjq89wpcq755ff1pglnwggs0d6jc3ca5f3"; depends=[Biobase curl data_table digest flowCore flowWorkspace ggplot2 gplots heatmaply httr jsonlite pheatmap plotly preprocessCore R6 Rlabkey rmarkdown scales]; }; + InPAS = derive2 { name="InPAS"; version="1.22.0"; sha256="0l9vddppnbx1gwyxvw5cxqc5pkgffdagss8v0dvw6m4629nwgawa"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; + InTAD = derive2 { name="InTAD"; version="1.10.0"; sha256="111z1r717h3qdn49y41zsnjjql8pnkf6zfi2pazp8xl2xdii4j5v"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggpubr IRanges mclust MultiAssayExperiment qvalue rtracklayer S4Vectors SummarizedExperiment]; }; + Informeasure = derive2 { name="Informeasure"; version="1.0.0"; sha256="1v05fr4llgb3kdsz2zbq68l1bkjiqxhavbsii4q5j3vrkq1fnwfs"; depends=[entropy matrixStats]; }; + IntEREst = derive2 { name="IntEREst"; version="1.14.0"; sha256="0nk8186d08y9xyvjnl9p4pgllfm1lj7yz8mmfnkn5ci7nfaibrj5"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; }; + InterMineR = derive2 { name="InterMineR"; version="1.12.3"; sha256="1r6pci76psb6zdv6jvzckwmswykjy95p79g40g7cn3cik55cn7j9"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; }; + InteractionSet = derive2 { name="InteractionSet"; version="1.18.1"; sha256="0dx6yw6rxgkcidnnyjzv57vzd112nf9n2bj6dkv7r3a2d2wj6xh4"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; }; + IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.12.0"; sha256="12s14vlah0zdpg5k0j1a0210f3jz3p0raxra982z0lf4i8pgqsb6"; depends=[FGNet igraph knitr]; }; + IsoCorrectoR = derive2 { name="IsoCorrectoR"; version="1.8.0"; sha256="0a29b4fscp6bb51qahrblgdml467m274yqc8c9078bsyn12a7111"; depends=[dplyr magrittr pracma quadprog readr readxl stringr tibble WriteXLS]; }; + IsoCorrectoRGUI = derive2 { name="IsoCorrectoRGUI"; version="1.6.0"; sha256="05pscfk626crw3kw4xjvjs72fd0s14f9kqmr7jszz4sb4f7r9fxh"; depends=[IsoCorrectoR readxl tcltk2]; }; + IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.26.0"; sha256="0f6zmmah5v8yv5hvjdp8bpqwpc80989y4m0x5yy5nyq9a24479qy"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; + IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.12.0"; sha256="0pv2ql65fbzdg2yy87acc2i1z89rw21a3cjmndx21zilyh9ahrg8"; depends=[BiocGenerics Biostrings BSgenome DBI DEXSeq dplyr DRIMSeq edgeR futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges limma magrittr plyr RColorBrewer RCurl readr reshape2 rtracklayer stringr tibble tximeta tximport VennDiagram XVector]; }; + KCsmart = derive2 { name="KCsmart"; version="2.48.0"; sha256="05r3gkh810ddbzxbw750xd1j49ng6pcgc6isdadsyvlqshxp4rmz"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; + KEGGREST = derive2 { name="KEGGREST"; version="1.30.1"; sha256="0k9z85xf9la2y98xqmdmjb8mci9fh2fdybkl77x1yl26hyalip0s"; depends=[Biostrings httr png]; }; + KEGGgraph = derive2 { name="KEGGgraph"; version="1.50.0"; sha256="1h293hn02ysm923bh9gxk87xv663xiqchqcvpaxpla9c3yrgkx2v"; depends=[graph RCurl XML]; }; + KEGGlincs = derive2 { name="KEGGlincs"; version="1.16.0"; sha256="1cq3cvpvdgdl1ykkzmqs3h8kvjz35n57vhcd9hkrl4f1ahdn9ry5"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; }; + KEGGprofile = derive2 { name="KEGGprofile"; version="1.32.0"; sha256="1480vi0s6lxgzs6nl4hb5wjn2mb4bznii3b3lfgapjhn8navaix6"; depends=[AnnotationDbi biomaRt ggplot2 KEGG_db KEGGREST png RCurl reshape2 TeachingDemos XML]; }; + KinSwingR = derive2 { name="KinSwingR"; version="1.8.0"; sha256="1029iq13mrblnhdbgnqhy4whnhykjqz2xi7avi75pmqawnmrmdzi"; depends=[BiocParallel data_table sqldf]; }; + KnowSeq = derive2 { name="KnowSeq"; version="1.4.5"; sha256="1zrw4jsy3cmydmknrzzlb6mir9pi3f2nbhsi107a9q4l1jviwc6s"; depends=[caret cqn e1071 edgeR ggplot2 gridExtra Hmisc httr jsonlite kernlab limma praznik R_utils randomForest reshape2 rlist rmarkdown stringr sva XML]; }; + LACE = derive2 { name="LACE"; version="1.2.1"; sha256="0510v6m3if7jqf37jvdqpkpdfg9xkr0spgj1g2mjbncwbw0glr9g"; depends=[igraph RColorBrewer Rfast SummarizedExperiment]; }; + LBE = derive2 { name="LBE"; version="1.58.0"; sha256="1nb1cxh1gl86d6647kqsjvx6cr79fz279blk2gc11xq1j03scmvh"; depends=[]; }; + LEA = derive2 { name="LEA"; version="3.2.0"; sha256="1m8ir631n7fmpgzfb20lmwppf2sjiml9jw2484k7limnmal09pjz"; depends=[]; }; + LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.16.0"; sha256="10km3bqnlawpzf56asfj1wa930dsnakzwlmym7fmyj7dicvljp7z"; depends=[CAMERA xcms]; }; + LOLA = derive2 { name="LOLA"; version="1.20.0"; sha256="026q1jszmmkaw5mvmsmms983scny53f6b632rvsijw3p1907p6j1"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; }; + LPE = derive2 { name="LPE"; version="1.64.0"; sha256="0azzxa1yxwj9q2nwfas0831vvcwawgcfc95m1gsx45daxr8zbhww"; depends=[]; }; + LPEadj = derive2 { name="LPEadj"; version="1.50.0"; sha256="0p5x6aal0jykzkllrfx9dr46i9gvh2whxq0dnwasjg9k5pfi67l8"; depends=[LPE]; }; + LRBaseDbi = derive2 { name="LRBaseDbi"; version="2.0.0"; sha256="1f27v8ar1rcswhvflgbw9r4lmjx7nrqrk0yqaf5l0gdm7givxlih"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; + LedPred = derive2 { name="LedPred"; version="1.24.0"; sha256="1gviwkc7h60mk8q76irkfhgk90inv3dkhph6h1c9rh9wzhnl296i"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; + LineagePulse = derive2 { name="LineagePulse"; version="1.10.0"; sha256="0n49gq8rhamhdpq0jrrs6l5zmnlpjcm0fwr5fsl063idws5zvs7g"; depends=[BiocParallel circlize ComplexHeatmap ggplot2 gplots knitr Matrix RColorBrewer SingleCellExperiment SummarizedExperiment]; }; + LinkHD = derive2 { name="LinkHD"; version="1.4.0"; sha256="10687gvkl256grriyc1abzm64vjzxiyfl1a1lfivcnfh17n36bd4"; depends=[cluster data_table emmeans ggplot2 ggpubr gridExtra MultiAssayExperiment reshape2 rio scales vegan]; }; + Linnorm = derive2 { name="Linnorm"; version="2.14.0"; sha256="1is1kp5av01kqqph16xl7w1dqbyd0q85pgqfv9gqkk8m53635cz3"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; }; + LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.44.0"; sha256="1257994vdakm6mbr3jn5smmai4spzk0gx0yhjblqikh6n5l0hzzm"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; + LoomExperiment = derive2 { name="LoomExperiment"; version="1.8.0"; sha256="1i7ihhdh7dxfvxab971c5gg5s2nqfjkphwwz6m6pnyxygh3298av"; depends=[DelayedArray GenomicRanges HDF5Array Matrix rhdf5 rtracklayer S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; + LowMACA = derive2 { name="LowMACA"; version="1.20.0"; sha256="1wazmngxrc1h1fcrvn790655dc5z03v6yi17b0w88bhrzfl190yc"; depends=[BiocParallel Biostrings cgdsr data_table gridBase httr LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; + LymphoSeq = derive2 { name="LymphoSeq"; version="1.18.0"; sha256="06y0zhzfm03x8k2alxm3x82q0fzg7kq277i8r2shjkms4v4llgkq"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; }; + M3C = derive2 { name="M3C"; version="1.12.0"; sha256="05ygi4fd85hh17mlww5wcww8d5z5zvkn2r46s4n6g18mcbv8snv5"; depends=[cluster corpcor doParallel doSNOW foreach ggplot2 Matrix matrixcalc Rtsne umap]; }; + M3Drop = derive2 { name="M3Drop"; version="1.16.0"; sha256="02q2zv6x3mxp9770l6xxp5dlbwgmspj79r2r5l5ynz796p958ngf"; depends=[bbmle gplots Hmisc irlba Matrix matrixStats numDeriv RColorBrewer reldist statmod]; }; + MACPET = derive2 { name="MACPET"; version="1.10.0"; sha256="1a2mfqi74c5k29bgcgc98abgd8qrpd554fc4ngp9ljkk40hkms5p"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; }; + MACSQuantifyR = derive2 { name="MACSQuantifyR"; version="1.4.0"; sha256="19nfw0fx7l18b50k5qvf5xnl3l35pgc8q2va2f0jbgzw6mz6a106"; depends=[ggplot2 ggrepel gridExtra lattice latticeExtra png prettydoc readxl rmarkdown rvest xml2]; }; + MADSEQ = derive2 { name="MADSEQ"; version="1.16.0"; sha256="073fm6myv84qp1k428riyp1x21k367xdsxysw7sxf6hi2lrzxzwh"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; }; + MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="1.10.0"; sha256="0vw4lidr458d8ij8y5ny5b8avkjxnxxpc3rnc4z4dww3r4wqpdzm"; depends=[Biobase clusterProfiler enrichplot ggplot2 ggrepel gridExtra reshape2]; }; + MAIT = derive2 { name="MAIT"; version="1.24.0"; sha256="0glqfb4jvcd9kvzs3vfv9v9apiv60f1lwszxs8n345sf8qsl55ky"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; + MANOR = derive2 { name="MANOR"; version="1.62.0"; sha256="0gqxgk9bd0axsx2vvhy46g7zynpxw23659iirn3pcanqryi5nayh"; depends=[GLAD]; }; + MAST = derive2 { name="MAST"; version="1.16.0"; sha256="11qr7n9i4masqz0yzikddchyn223m8dy6zv461dly07fd43qi9mn"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr progress reshape2 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; + MBASED = derive2 { name="MBASED"; version="1.24.0"; sha256="1igdji9xm0ya82c7jxdlf1zsksm02cx82f2jcspl376959f4cc1j"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; + MBAmethyl = derive2 { name="MBAmethyl"; version="1.24.0"; sha256="0zb5lk3w8rpb59zbx3zvpb7cb7jd4yxdfmwr0snb2zk6l2pj52gw"; depends=[]; }; + MBCB = derive2 { name="MBCB"; version="1.44.0"; sha256="0lsijrgqmhy8w5fdpgh3f38wb9nw9kx5lmngrmzn0i4byn5r2znm"; depends=[preprocessCore tcltk2]; }; + MBQN = derive2 { name="MBQN"; version="2.2.0"; sha256="13w1vg7syp0h9s5bmgm05rsyrmfj2rk3h113ggcvwbxkm9z20r97"; depends=[BiocFileCache ggplot2 limma PairedData preprocessCore rappdirs RCurl rpx SummarizedExperiment xml2]; }; + MBttest = derive2 { name="MBttest"; version="1.18.0"; sha256="0k8vapsik7hgkqbm584s7vzrq0zsmqj33g7biinzmf7pwdi0ynx5"; depends=[gplots gtools]; }; + MCbiclust = derive2 { name="MCbiclust"; version="1.14.0"; sha256="0660a9164q6gkhxzx2ss0qn2s4lpfmvdkyd1siyklnfqv2pc873q"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; }; + MDTS = derive2 { name="MDTS"; version="1.10.0"; sha256="0vyj8ysx869pvcpv49073wvmb9p2bhw8c8jqxgbkafmn6xf36j21"; depends=[Biostrings DNAcopy GenomicAlignments GenomicRanges IRanges Rsamtools stringr]; }; + MEAL = derive2 { name="MEAL"; version="1.20.4"; sha256="1agkg2x2dfgdmza863nb77zjm3svyiwrcia6qm398ndl2w3w34iw"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SummarizedExperiment vegan]; }; + MEAT = derive2 { name="MEAT"; version="1.2.2"; sha256="1zf309n98z2dwd3y2chpw2g66v2fpv8sxqs53xg5y1f9qlzs3bq9"; depends=[dplyr dynamicTreeCut glmnet impute minfi RPMM stringr SummarizedExperiment tibble wateRmelon]; }; + MEB = derive2 { name="MEB"; version="1.4.0"; sha256="1x112265xi7ww7gvjfiqzcclimp6mpj30hqnyb0zq2r2fmvxfra7"; depends=[e1071 SummarizedExperiment]; }; + MEDIPS = derive2 { name="MEDIPS"; version="1.42.0"; sha256="1qg4466ddhkgqv8fpi72zrpygp4mw03nz5n1472y8s7chvjmfi3x"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; + MEDME = derive2 { name="MEDME"; version="1.50.0"; sha256="0ziqmvzwhbc2iszck25vc3yqq2ksb6vfsv1m914cqyvkgdlibz8a"; depends=[Biostrings drc MASS]; }; + MEIGOR = derive2 { name="MEIGOR"; version="1.24.0"; sha256="1zw7lwybhq7vipilfgqlb8gykgawjnq517hf28n0p61in9jqic2z"; depends=[CNORode deSolve Rsolnp snowfall]; }; + MGFM = derive2 { name="MGFM"; version="1.24.0"; sha256="1whfdwnigdyfl78gl0p5yr9r24m0jf6zk6rr58mn83fkb9d5c1gq"; depends=[annotate AnnotationDbi]; }; + MGFR = derive2 { name="MGFR"; version="1.16.0"; sha256="0drkjirwj922p9q450p60804ncqk120y63r1wiyai8b0ykmky0qp"; depends=[annotate biomaRt]; }; + MIGSA = derive2 { name="MIGSA"; version="1.14.1"; sha256="0mbxghm8l1k0fkxyh64gsh3is9jiwsslsjgf8yhflvnkvcma840d"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase ismev jsonlite limma matrixStats org_Hs_eg_db RBGL reshape2 Rgraphviz vegan]; }; + MIMOSA = derive2 { name="MIMOSA"; version="1.28.1"; sha256="0gjwmm63xay3d75wnqwvj30h366zx2a6n4l3f2fbrkyf67fgysfq"; depends=[Biobase coda data_table dplyr Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape rlang scales testthat tidyr]; }; + MIRA = derive2 { name="MIRA"; version="1.12.0"; sha256="1ad01xq1j0nf3mqkmb4xxs54fq3azj5h896ciz6294gqwqrhnp3v"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; }; + MLInterfaces = derive2 { name="MLInterfaces"; version="1.70.0"; sha256="1j920h1657rc5agd1vrkzk126npfhw7pzr7p7gwg4i0h0wv25q3r"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer Rcpp rpart sfsmisc shiny threejs]; }; + MLP = derive2 { name="MLP"; version="1.38.0"; sha256="0a9ax3jv30w55z6lljba1vd9x4azi7wd49zvr5aqar18yfscsjcv"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; + MLSeq = derive2 { name="MLSeq"; version="2.8.0"; sha256="0wyfhfzrnllj0wjs4pbp0b6ighhg8m3wjknj6cwy6gd47f5m59bx"; depends=[Biobase caret DESeq2 edgeR foreach ggplot2 limma plyr sSeq SummarizedExperiment xtable]; }; + MMAPPR2 = derive2 { name="MMAPPR2"; version="1.4.0"; sha256="1b7xvmig3p5gy7r8smhjb9j7w9hnp9smf56kfai5kwv4k406mffy"; depends=[Biobase BiocGenerics BiocParallel data_table dplyr ensemblVEP GenomeInfoDb GenomicRanges gmapR IRanges magrittr Rsamtools S4Vectors stringr tidyr VariantAnnotation VariantTools]; }; + MMDiff2 = derive2 { name="MMDiff2"; version="1.18.0"; sha256="15b8ib2cnlix6v6ls5xqw5hzc5y0n3pfd1qjxz6aiifk3qv05z8l"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; + MMUPHin = derive2 { name="MMUPHin"; version="1.4.2"; sha256="1kjckp7h7qx629vdx947b873zcxcbd6wg5f83ksh54pk0zfb4k9q"; depends=[cowplot dplyr fpc ggplot2 igraph Maaslin2 metafor tidyr]; }; + MODA = derive2 { name="MODA"; version="1.16.0"; sha256="0jpvms8safpxl13hjmb5lnb5kj1qz1z8v7bsd44h7cf01wbxvzi6"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; }; + MOFA = derive2 { name="MOFA"; version="1.6.2"; sha256="0ay1sndc3abhypw8mjpls8lpwwfcaxykliqly8fafwn7daqrz4kz"; depends=[Biobase corrplot cowplot doParallel dplyr foreach GGally ggbeeswarm ggplot2 ggrepel MultiAssayExperiment pheatmap RColorBrewer reshape2 reticulate rhdf5 scales]; }; + MOFA2 = derive2 { name="MOFA2"; version="1.0.1"; sha256="0wq6p2ndiz5cfxyz0x2in4vnm1djhlkkfhwn4l8p3ja8zhmm20mw"; depends=[basilisk corrplot cowplot DelayedArray dplyr forcats GGally ggplot2 ggrepel HDF5Array magrittr pheatmap RColorBrewer reshape2 reticulate rhdf5 Rtsne tidyr uwot]; }; + MOGAMUN = derive2 { name="MOGAMUN"; version="1.0.1"; sha256="08cvfj2kr564ip6bhiv6rwmvn3mlddhl6w9cxcyd9rhavxj20ysw"; depends=[BiocParallel igraph RCy3 RUnit stringr]; }; + MOMA = derive2 { name="MOMA"; version="1.2.0"; sha256="1fc492901izqrp3whww72fv42sxbhqsmx7czrimbs5igibnx2hld"; depends=[circlize cluster ComplexHeatmap dplyr ggplot2 magrittr MKmisc MultiAssayExperiment qvalue RColorBrewer readr reshape2 rlang stringr tibble tidyr]; }; + MOSim = derive2 { name="MOSim"; version="1.4.0"; sha256="05p03sf6lcvxlkah990ppz9v5c1a8d5d1gldv4r6knb135f4rbsr"; depends=[Biobase dplyr ggplot2 HiddenMarkov IRanges lazyeval matrixStats purrr rlang S4Vectors scales stringi stringr tibble tidyr zoo]; }; + MPFE = derive2 { name="MPFE"; version="1.26.0"; sha256="1ssim6g0clwkflwsiwm5r3pnqja79y49806mc7iq5i88xj64f5ph"; depends=[]; }; + MPRAnalyze = derive2 { name="MPRAnalyze"; version="1.8.0"; sha256="0b1920ir5zkf5g5yd6kjgwc1ifv9x34mq1cc3hzn6fqwd01irnkh"; depends=[BiocParallel progress SummarizedExperiment]; }; + MSEADbi = derive2 { name="MSEADbi"; version="1.0.0"; sha256="0kk11kys70q1hacass6czyqywvphzcmsrfzlzgf6wb3xpv29znk3"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; + MSGFgui = derive2 { name="MSGFgui"; version="1.24.0"; sha256="15zjd20xygjv5syxjwsl4j0xwagi37v58x8d40yfq0ldgbyw0di9"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; + MSGFplus = derive2 { name="MSGFplus"; version="1.24.0"; sha256="1vz4zbhvm77bmk8wma8cclpafhzp7g59xfi0lmj88gxjbdzyvvxq"; depends=[mzID ProtGenerics]; }; + MSPrep = derive2 { name="MSPrep"; version="1.0.0"; sha256="0nb7xh45jixlmvnlx8yfjdpb6p85010hw48nm4iczd78qww5i1y6"; depends=[crmn ddpcr dplyr magrittr pcaMethods preprocessCore rlang S4Vectors stringr SummarizedExperiment sva tibble tidyr VIM]; }; + MSnID = derive2 { name="MSnID"; version="1.24.0"; sha256="05bncy7lw2a3h8xgnavjiz56pc6mk8q7l6qdd81197nawxs3j02d"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics BiocStyle Biostrings data_table doParallel dplyr foreach ggplot2 iterators msmsTests MSnbase mzID mzR ProtGenerics purrr R_cache Rcpp reshape2 rlang RUnit stringr tibble xtable]; }; + MSnbase = derive2 { name="MSnbase"; version="2.16.1"; sha256="0hxzs9zzljywqxr7q388hshpy1pdryhl0zkwffqbxpf5pcf92d3h"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant MASS mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp S4Vectors scales vsn XML]; }; + MSstats = derive2 { name="MSstats"; version="3.22.1"; sha256="1v5591igcgjn2535lnhnkzlxkx7y3y0075i8anpx265d8rry5nma"; depends=[broom data_table doSNOW dplyr foreach ggplot2 ggrepel gplots limma lme4 marray MASS minpack_lm preprocessCore purrr reshape2 snow statmod stringr survival tidyr]; }; + MSstatsConvert = derive2 { name="MSstatsConvert"; version="1.0.0"; sha256="0k46m7qj2qjdknrh2ck1rya5y9s684rwijqssz3mpcpd35dy48xl"; depends=[checkmate data_table log4r]; }; + MSstatsPTM = derive2 { name="MSstatsPTM"; version="1.0.0"; sha256="0dpsphpmlwwvzl91158kkmzh5ggdr5ab0zj6iiqq09p48q0vwqz4"; depends=[Biostrings broom dplyr rlang tibble tidyr tidyselect]; }; + MSstatsQC = derive2 { name="MSstatsQC"; version="2.8.0"; sha256="0pjqhj846n3mcbb4pk1smczhz9xz7ygb6a7b362najss2waism6f"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics]; }; + MSstatsQCgui = derive2 { name="MSstatsQCgui"; version="1.10.0"; sha256="067y5zj9v7w5z4g4y1ni7i4c4qiis5a1wywffm1ndrvi1kvjsidj"; depends=[dplyr ggExtra gridExtra MSstatsQC plotly shiny]; }; + MSstatsSampleSize = derive2 { name="MSstatsSampleSize"; version="1.4.0"; sha256="0lqgwl366f9fkf3svkgym1rk8rndydc7rm0w1wp25rm2ya2aqi30"; depends=[BiocParallel caret ggplot2 gridExtra MSstats reshape2]; }; + MSstatsTMT = derive2 { name="MSstatsTMT"; version="1.8.2"; sha256="1qwayg12fay30qz3cmjdb5sgds1xbvk540bpqz97180xmxwdi185"; depends=[data_table dplyr ggplot2 limma lme4 lmerTest matrixStats MSstats reshape2 statmod tidyr]; }; + MSstatsTMTPTM = derive2 { name="MSstatsTMTPTM"; version="1.0.2"; sha256="04igrlfbdmalqb42x6rir11n7ij6d69pb6v8irih1nbgxa0ffk0p"; depends=[dplyr ggplot2 gridExtra MSstatsTMT Rcpp reshape2 stringr]; }; + MVCClass = derive2 { name="MVCClass"; version="1.64.0"; sha256="0ndpkbj79kbr3scf4ajhm1v5ncz5jnx5g1crc04azq1l3c0n6x8p"; depends=[]; }; + MWASTools = derive2 { name="MWASTools"; version="1.14.0"; sha256="0pj0aafs4ynzvgx3vq7d2c4wjx771xj3494cgaxv20avwm1v3d9c"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; }; + Maaslin2 = derive2 { name="Maaslin2"; version="1.4.0"; sha256="0n48clyarmbp6g4sv1rg6v47jfsiicpcjyfhdnr7wlsr5yd1ww4s"; depends=[biglm car chemometrics cplm data_table dplyr edgeR ggplot2 glmmTMB hash lmerTest logging lpsymphony MASS metagenomeSeq MuMIn optparse pbapply pcaPP pheatmap pscl robustbase vegan]; }; + MantelCorr = derive2 { name="MantelCorr"; version="1.60.0"; sha256="1bhx0jbi6zmx5g21k0i2hdacbrzapbr5jkglpi06g7ky08vjakdg"; depends=[]; }; + MassArray = derive2 { name="MassArray"; version="1.42.0"; sha256="0wmm13k088bzv09sq34mnj6g0c78mhv5g11s5mgxsiclhq1hxqb9"; depends=[]; }; + MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.56.0"; sha256="1vvxbxc538raqdsy0x9ln41vjhp2aw1nrh4k35y3s9mhb1jlzzv3"; depends=[waveslim]; }; + MatrixGenerics = derive2 { name="MatrixGenerics"; version="1.2.1"; sha256="163f0z33cv6038gcjdxn1hadcg9b09qgvm6zc5zn97y4rc8grkrb"; depends=[matrixStats]; }; + MatrixRider = derive2 { name="MatrixRider"; version="1.22.0"; sha256="09mip8fvysr59hp0sk0wvs9qxs9rq2gqcv4hv6259jdqa6b9k2zp"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; + MeSHDbi = derive2 { name="MeSHDbi"; version="1.26.0"; sha256="1872r6b5w9abzawj8yb061mgn5fx91sf9x9gidi3fp5z0n6bhlf3"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; + MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.62.0"; sha256="0rahjshh5k04v2xcbcr3q0bdjwshfjwcg6i1bycdkxj7vxsd5wzs"; depends=[]; }; + Melissa = derive2 { name="Melissa"; version="1.6.0"; sha256="1jhjkd03lfsi6sarclckzzdzq0s0df6j1shdb2m7k9lcirpn8kpi"; depends=[assertthat BiocStyle BPRMeth cowplot data_table doParallel foreach GenomicRanges ggplot2 magrittr matrixcalc mclust MCMCpack mvtnorm ROCR truncnorm]; }; + Mergeomics = derive2 { name="Mergeomics"; version="1.18.0"; sha256="0lzb9j9fj1a5m963ldbi13k4yj1205z37slz597q7bfkp2lm8sv8"; depends=[]; }; + MesKit = derive2 { name="MesKit"; version="1.0.1"; sha256="0dszayy8425sdv14fai0m5sh3k1wv7yx2aqbr5z7iqr2pxgpswgy"; depends=[AnnotationDbi ape Biostrings circlize ComplexHeatmap cowplot data_table dplyr ggplot2 ggrepel ggridges IRanges mclust phangorn pracma RColorBrewer S4Vectors tidyr]; }; + MetCirc = derive2 { name="MetCirc"; version="1.20.0"; sha256="0az9qpyh986lddxb99c6g92syxnsh96dbgsms1ygimj5vzinmkwa"; depends=[amap circlize ggplot2 MSnbase S4Vectors scales shiny]; }; + MetID = derive2 { name="MetID"; version="1.8.0"; sha256="0hcb8hwavd5qk4qdkcvrm89j1l2s4qfkgcrb140xxsxp3hp4rdyy"; depends=[ChemmineR devtools igraph Matrix stringr]; }; + MetNet = derive2 { name="MetNet"; version="1.8.0"; sha256="1zhjr2bb8b2ln9jkrc6954cnapz9yjb3qm1vzs1sn1ra7bzb1rm8"; depends=[BiocParallel bnlearn GENIE3 mpmi parmigene ppcor sna stabs]; }; + MetaCyto = derive2 { name="MetaCyto"; version="1.12.0"; sha256="0xakf4njcly4fa064f5h074gba9adggdm57vxyqm8syznpm43mkj"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; }; + MetaNeighbor = derive2 { name="MetaNeighbor"; version="1.10.0"; sha256="0chbxj98gm1gvcpqnpzh68r7rn2ggdx3l2jp42s5rqfn7axc1lhr"; depends=[beanplot dplyr ggplot2 gplots igraph Matrix matrixStats RColorBrewer SingleCellExperiment SummarizedExperiment tibble tidyr]; }; + MetaVolcanoR = derive2 { name="MetaVolcanoR"; version="1.4.0"; sha256="1m73594p045pygihm1dhfzqlv9yjcfpw1fj4k5jbrdq3ki9pi7yc"; depends=[cowplot data_table dplyr ggplot2 htmlwidgets metafor metap plotly rlang tidyr topconfects]; }; + Metab = derive2 { name="Metab"; version="1.24.0"; sha256="0kax2fghjv7f6w841fwhyzmcij1wv6vla0n1l7xfpdw7j8rq5d1n"; depends=[pander svDialogs xcms]; }; + MetaboSignal = derive2 { name="MetaboSignal"; version="1.20.0"; sha256="1nsr75svdznz6m4imc3l3an72n21f5pf3qacmzrrwszyxlcgpbxx"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; }; + MethCP = derive2 { name="MethCP"; version="1.4.0"; sha256="06jw5zg53lv61ip1m0iaqzdg23v6fclnlbvy0ii0fpjpw216mpyq"; depends=[BiocParallel bsseq DNAcopy DSS GenomeInfoDb GenomicRanges IRanges methylKit S4Vectors]; }; + MethPed = derive2 { name="MethPed"; version="1.18.0"; sha256="1lmjh16rdsm39gmsxqrlkasa4hkd7i6ag8rp22nlnkkq120w41gv"; depends=[Biobase randomForest]; }; + MethReg = derive2 { name="MethReg"; version="1.0.0"; sha256="1azzia6zwm8i5j0x4ipfrqb5pzlxz1vvcqasflwj5kj6sd5n33kr"; depends=[DelayedArray dplyr GenomicRanges ggplot2 ggpubr IRanges MASS Matrix plyr progress pscl readr rlang S4Vectors sesameData sfsmisc stringr SummarizedExperiment tibble tidyr]; }; + MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.22.0"; sha256="1bdg3z18mqawm8s6xwmp52rj2v55vajgm97a5dych1pwjxzhl33r"; depends=[Biostrings gplots seqinr stringr]; }; + MethylAid = derive2 { name="MethylAid"; version="1.24.0"; sha256="0sbfs75d4bddrdiany7mqg9lr3rwgpr82vm8588130290y6ssdyr"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; }; + MethylMix = derive2 { name="MethylMix"; version="2.20.0"; sha256="1w4mcxr2yr9ky37skgiiqrxbzk3kykb6lr5jp52c3zhd9hvpbi18"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; }; + MethylSeekR = derive2 { name="MethylSeekR"; version="1.30.0"; sha256="0x2rijjyr49d414hs21zpqyz0cs50wmf7wr4n3mwczwfwv53rrzk"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; + Mfuzz = derive2 { name="Mfuzz"; version="2.50.0"; sha256="0bnf3b69fr09v4wnmnjy7gwb5x3zaakrz3m1jlfj2q7pzf3rbglz"; depends=[Biobase e1071 tkWidgets]; }; + MiChip = derive2 { name="MiChip"; version="1.44.0"; sha256="17l937238n8i2ra7apamz1hb9y387wxkab2by7adjqr2gxndfyw0"; depends=[Biobase]; }; + MiPP = derive2 { name="MiPP"; version="1.62.0"; sha256="0ki9rbvnr5zbygxc2qpz1kjja5bbyf49ir8cczh4ywng2limzk8z"; depends=[Biobase e1071 MASS]; }; + MiRaGE = derive2 { name="MiRaGE"; version="1.32.0"; sha256="12441p6ibi21l3fb3rp77i3s06jz9vsd7jmvgmh051d45s6hbhdx"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager S4Vectors]; }; + MicrobiotaProcess = derive2 { name="MicrobiotaProcess"; version="1.2.2"; sha256="1kpd95z8jkj90ycmklcpjc2vpy5scs2lrnpdyvmkkg82m4zblcgl"; depends=[ape Biostrings coin dplyr ggplot2 ggrepel ggsignif ggstar ggtree gtools magrittr MASS patchwork phyloseq plyr reshape rlang Rmisc tibble tidyr tidytree vegan zoo]; }; + MineICA = derive2 { name="MineICA"; version="1.30.0"; sha256="0xrc9hr8fwj57x8yvvncp2iyyd9ym5d7n0h520mn7c5m7shzhvcl"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; + MinimumDistance = derive2 { name="MinimumDistance"; version="1.34.0"; sha256="0psq3yhwl02n1k8g8s1xgmj87kwjp0rgn582d356q184j0skvynk"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice MatrixGenerics matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; + Modstrings = derive2 { name="Modstrings"; version="1.6.0"; sha256="0cxph4d4kqspqi3hw2k9xm9jbdng0a9v1dag507v9d98pvvd5i98"; depends=[BiocGenerics Biostrings crayon GenomicRanges IRanges S4Vectors stringi stringr XVector]; }; + MoonlightR = derive2 { name="MoonlightR"; version="1.16.0"; sha256="1lz7100nd3i4hhi54ad13f0vi79wrhfx128yhbp3v07x8ragxcwa"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; + MotifDb = derive2 { name="MotifDb"; version="1.32.0"; sha256="0gfk1dgw7gd2y4cnmfdzpzjqkvvikcwx20h0fp7aiq8f0zfwlav5"; depends=[BiocGenerics Biostrings GenomicRanges IRanges rtracklayer S4Vectors splitstackshape]; }; + MouseFM = derive2 { name="MouseFM"; version="1.0.0"; sha256="1qs56cp46myymkwz8kl1q75m81dd184z7m327w9m53lrlx0yp40g"; depends=[biomaRt curl data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gtools httr IRanges jsonlite reshape2 rlist scales tidyr]; }; + MsCoreUtils = derive2 { name="MsCoreUtils"; version="1.2.0"; sha256="0fa3bcf2cmzf5y8wjs7pnzs26qwgqnrrl4hj4sa4fp9kv8z80630"; depends=[MASS Rcpp S4Vectors]; }; + Mulcom = derive2 { name="Mulcom"; version="1.40.0"; sha256="02kxasxc326wr4phgfzk8vaz7xwc0chq8ygxrn405afizvy020s9"; depends=[Biobase fields]; }; + MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.16.0"; sha256="1nx3gikl8vr54862h6wl0q30arnpynla085219lhh61ziswdffrs"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment tidyr]; }; + MultiBaC = derive2 { name="MultiBaC"; version="1.0.0"; sha256="1873dl8dddfxh7jxc3w3x9lywlhv93fg0pw2livbkhpfcnhy9csr"; depends=[ggplot2 Matrix MultiAssayExperiment ropls]; }; + MultiDataSet = derive2 { name="MultiDataSet"; version="1.18.2"; sha256="1wzhxgprriicw6lx1h91z4r9d5yaxar859scp83bm8pr9aznqk2z"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; }; + MultiMed = derive2 { name="MultiMed"; version="2.12.0"; sha256="0p3h2fvi37qa6h22zzxqg2sa61w3cagjcj1nxa7vr09m6x5f87zs"; depends=[]; }; + MutationalPatterns = derive2 { name="MutationalPatterns"; version="3.0.1"; sha256="1988kjjgq8af0hj7chhpxi88717wwmzs9qgrwapjh0hm2hjwhn35"; depends=[BiocGenerics Biostrings BSgenome cowplot dplyr GenomeInfoDb GenomicRanges ggalluvial ggdendro ggplot2 IRanges magrittr NMF pracma purrr S4Vectors stringr tibble tidyr VariantAnnotation]; }; + NADfinder = derive2 { name="NADfinder"; version="1.14.0"; sha256="1iwab27dcqq7kd8yhrk4jdzsalvjb43193ib8b0vicpans8nwsn1"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; + NBAMSeq = derive2 { name="NBAMSeq"; version="1.6.1"; sha256="15vi65j2k48z97sk3dx8j0vdqi3iya8664lixd6bdih79vz7x3g6"; depends=[BiocParallel DESeq2 genefilter mgcv S4Vectors SummarizedExperiment]; }; + NBSplice = derive2 { name="NBSplice"; version="1.8.0"; sha256="16axfb0y31fln5h6pzjx58708np3hg60xajhdsbsgrl8y7zigr71"; depends=[BiocParallel car edgeR ggplot2 MASS mppa reshape2]; }; + NCIgraph = derive2 { name="NCIgraph"; version="1.38.0"; sha256="1fs9m1vnjsazfnwkps17rqkpawdr9ljg9nqnfbwrq1k21mhbv5ls"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; }; + NOISeq = derive2 { name="NOISeq"; version="2.34.0"; sha256="08qlavakclgzk345bliam4cfjhsy39n4s6m1biqpq94n9qp00x8f"; depends=[Biobase Matrix]; }; + NPARC = derive2 { name="NPARC"; version="1.2.0"; sha256="00f54chcd8zpgb363k6ljqygpl5gi4rh8pxknw4520w871qgh4gb"; depends=[BiocParallel broom dplyr magrittr MASS rlang tidyr]; }; + NTW = derive2 { name="NTW"; version="1.40.0"; sha256="04mpry81k1d35x4nq14p8f2wnmkhwc0sldzifnhcfhbxib21nr7l"; depends=[mvtnorm]; }; + NanoMethViz = derive2 { name="NanoMethViz"; version="1.0.0"; sha256="11y4353lsf2hc8099pcrlgvx9dfir71z6hhrryj3jslgbgn3igpj"; depends=[AnnotationDbi assertthat bsseq data_table dplyr e1071 forcats fs GenomicRanges ggplot2 ggthemes glue patchwork purrr Rcpp readr rlang Rsamtools RSQLite S4Vectors scales stringr SummarizedExperiment tibble tidyr zlibbioc]; }; + NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.20.0"; sha256="0jy27d0ffb8cxa24ncy9h2cckmaf1k02w64k7ak73w7izr9h99qs"; depends=[Biobase matrixStats Rcpp]; }; + NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.22.0"; sha256="16kmnlnrjama307n2ajmw5k374pa21yxnfdap89q909v49s63yzc"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; + Nebulosa = derive2 { name="Nebulosa"; version="1.0.2"; sha256="1qgq41x3k9w180g94gv3hkxkn4asjqq7gp4r21cgf9jr78gnikpc"; depends=[ggplot2 ks Matrix patchwork Seurat SeuratObject SingleCellExperiment SummarizedExperiment]; }; + NeighborNet = derive2 { name="NeighborNet"; version="1.8.0"; sha256="1pshg9diynd2rw8z7ia0yqdgnirr1awsria9r42rfvrwgksl1j92"; depends=[graph]; }; + NetPathMiner = derive2 { name="NetPathMiner"; version="1.26.0"; sha256="1dhfxqfqxq8cv7dhgw0s3xxy8b7az6wdd6plhq9jwflw000w11yi"; depends=[igraph]; }; + NetSAM = derive2 { name="NetSAM"; version="1.30.0"; sha256="1gy9mcmnynjiajiq4gyr9fdkrdjpgw4r78hb8b5xw9aajxz7jghh"; depends=[graph igraph seriation]; }; + NewWave = derive2 { name="NewWave"; version="1.0.2"; sha256="1nhgkkpai6jpqhqimnd1b8mjgcm9xfk2jkap0ymb6344gidysf7q"; depends=[BiocSingular DelayedArray irlba Matrix SharedObject SingleCellExperiment SummarizedExperiment]; }; + NoRCE = derive2 { name="NoRCE"; version="1.2.0"; sha256="1s0xddh6ywhqyslm5s1hh7sirsmg2z4phd4q2zxjsf3k8h423690"; depends=[AnnotationDbi biomaRt DBI dbplyr dplyr GenomicFeatures GenomicRanges ggplot2 GO_db igraph IRanges KEGGREST png RCurl reactome_db readr reshape2 RSQLite rtracklayer rWikiPathways S4Vectors SummarizedExperiment tidyr zlibbioc]; }; + NormalyzerDE = derive2 { name="NormalyzerDE"; version="1.8.0"; sha256="0ybvzfg4skdp0c2hd0x8ad2ldzx908a9414a5m8m2p7a9yn9xx5v"; depends=[ape Biobase car ggforce ggplot2 limma MASS matrixStats preprocessCore raster RcmdrMisc SummarizedExperiment vsn]; }; + NormqPCR = derive2 { name="NormqPCR"; version="1.36.0"; sha256="09hv89dviwxaz0d253zh7bqag426f1cbwv84i0hrmhz2my26hwjd"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; + NuPoP = derive2 { name="NuPoP"; version="1.40.0"; sha256="1r99h8w4njmrpk08gi3wj2rc1gw5992zf7dnlgqcch305107l610"; depends=[]; }; + OCplus = derive2 { name="OCplus"; version="1.64.0"; sha256="1pl0f8927riyrnazark6blhcrl4h0krni4rsccn668c65a64sblr"; depends=[akima multtest]; }; + OLIN = derive2 { name="OLIN"; version="1.68.0"; sha256="175s2p6g8j4xw82n2byl06rjafk8myny9dnwmy7w631pz84dzz7c"; depends=[limma locfit marray]; }; + OLINgui = derive2 { name="OLINgui"; version="1.64.0"; sha256="0y8p0ma94lm2fi6sxmn777cf3p5wg3ilig092plwqc6nghk8g226"; depends=[marray OLIN tkWidgets widgetTools]; }; + OMICsPCA = derive2 { name="OMICsPCA"; version="1.8.0"; sha256="1ic9fr102gcvzgfp8yi86hbiy8qspmjdwd41kplc0ykbx1axvjvc"; depends=[cluster clValid corrplot cowplot data_table factoextra FactoMineR fpc GenomeInfoDb ggplot2 HelloRanges IRanges kableExtra magick MASS MultiAssayExperiment NbClust OMICsPCAdata pdftools PerformanceAnalytics reshape2 rgl rmarkdown rtracklayer tidyr]; }; + OPWeight = derive2 { name="OPWeight"; version="1.12.0"; sha256="06yl1kpq5ijq7s7gbng0n61hr2idr5i8hgckgaxafp9pg1pdayjm"; depends=[MASS qvalue tibble]; }; + ORFik = derive2 { name="ORFik"; version="1.10.13"; sha256="0ghrsdf874b82gfmksr58lhlhfrkqy53cl85vgb160dz08kij7yl"; depends=[AnnotationDbi BiocGenerics BiocParallel biomartr Biostrings BSgenome cowplot data_table DESeq2 fst GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra IRanges R_utils Rcpp RCurl Rsamtools rtracklayer S4Vectors SummarizedExperiment xml2]; }; + OSAT = derive2 { name="OSAT"; version="1.38.0"; sha256="19zcr00ig1b5zca1mh9k4z21rpxyx4njdy90zvz6yyrlb1q54zs7"; depends=[]; }; + OTUbase = derive2 { name="OTUbase"; version="1.40.0"; sha256="0y70ki13frf50y1qpd2lkjwxj1q5ri4ql1ic2vns11i86kj6msrc"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; + OUTRIDER = derive2 { name="OUTRIDER"; version="1.8.0"; sha256="0rzb7fdgw4iq8gn2a8lm3hgnnxfywkhf9kx9yl4ylxq4lf4n6iyj"; depends=[BBmisc BiocGenerics BiocParallel data_table DESeq2 generics GenomicFeatures GenomicRanges ggplot2 heatmaply IRanges matrixStats pcaMethods pheatmap plotly plyr PRROC RColorBrewer Rcpp RcppArmadillo reshape2 S4Vectors scales SummarizedExperiment]; }; + OVESEG = derive2 { name="OVESEG"; version="1.6.0"; sha256="0ynzjf0yp78762rfi5j59aj81csbwgviclv8qwdf71bfgjahqzj1"; depends=[BiocParallel fdrtool limma Rcpp SummarizedExperiment]; }; + OmaDB = derive2 { name="OmaDB"; version="2.6.1"; sha256="11ij29i0k7hwpbfwnsd1sr9fr52dc5vjwmkwv5s0fzmahl4mbwcs"; depends=[ape Biostrings GenomicRanges httr IRanges jsonlite plyr topGO]; }; + OmicCircos = derive2 { name="OmicCircos"; version="1.28.0"; sha256="066wn2vf965r98d5j05ig1ah2j2ycgjm7krx9cpprdvdak2xfz44"; depends=[GenomicRanges]; }; + OmicsLonDA = derive2 { name="OmicsLonDA"; version="1.6.0"; sha256="0ynjca24mzr902lcima59w4gaazdg7yxhhn88dqalkx20nzxr82k"; depends=[BiocGenerics BiocParallel ggplot2 gss plyr pracma SummarizedExperiment zoo]; }; + Omixer = derive2 { name="Omixer"; version="1.0.4"; sha256="0bdfprq3s3mhnj7xrvkh3gphpa87cw3yfi3gddhbhm6nxm7lya0b"; depends=[dplyr forcats ggplot2 gridExtra magrittr readr stringr tibble tidyselect]; }; + OmnipathR = derive2 { name="OmnipathR"; version="2.0.0"; sha256="18v5kbq7r61r1s69rcssgqfw5733i61npx3831bw7by9q5z826mi"; depends=[dplyr igraph jsonlite rlang tidyr]; }; + Onassis = derive2 { name="Onassis"; version="1.12.0"; sha256="18rypslkr13a6ifgdr813cmq3n6v2mbdl23298iq6wfzl9i1cak8"; depends=[AnnotationDbi clusteval data_table dendextend DT GEOmetadb ggfortify ggplot2 knitr OnassisJavaLibs RCurl rJava RSQLite Rtsne]; }; + OncoScore = derive2 { name="OncoScore"; version="1.18.0"; sha256="0z9js0s8s50lfa4qkqp8rh72l2l4v5wc7bgwp69cn8czfllf00n8"; depends=[biomaRt]; }; + OncoSimulR = derive2 { name="OncoSimulR"; version="2.20.0"; sha256="0q0d7iy9z3v8154cxkdhw326cy4dra4aq9006lcysb1vrb7zxd72"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph RColorBrewer Rcpp Rgraphviz smatr]; }; + OpenStats = derive2 { name="OpenStats"; version="1.2.0"; sha256="0378q1qwyx78i4y1q4wz6mf22h38cv63wynvgpdcz3bs84sn56p1"; depends=[AICcmodavg car Hmisc jsonlite knitr MASS nlme rlist summarytools]; }; + OrderedList = derive2 { name="OrderedList"; version="1.62.0"; sha256="1wng47d64m3xy4w6awfs3wfqag599083avcrvjca5ac9ff88qd4q"; depends=[Biobase twilight]; }; + Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.18.0"; sha256="0ldyx6jmpd97h13wq66pdslfws472abdws9nlymrf28rl23hpwvz"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges rlang RSQLite S4Vectors tibble]; }; + OrganismDbi = derive2 { name="OrganismDbi"; version="1.32.0"; sha256="1mklnzs0d0ygcdibwfnk5xqr8ln6wpa00qcaw9c68m342kql0jqw"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; }; + Oscope = derive2 { name="Oscope"; version="1.20.0"; sha256="1am1zm39jaqdsxjrf09f5nbx58rd4shzvjp19lw7av7iq2r222g1"; depends=[BiocParallel cluster EBSeq testthat]; }; + OutlierD = derive2 { name="OutlierD"; version="1.53.0"; sha256="1hvs3r9zwif0f3dbskx1rhkah5m001xk42qx7mw93fp4khdda715"; depends=[Biobase quantreg]; }; + PAA = derive2 { name="PAA"; version="1.24.0"; sha256="1q6r7vr6q7x52p4dirnl1d1z9plyh0w51bmrqchwx5grafymwbgg"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; + PADOG = derive2 { name="PADOG"; version="1.32.0"; sha256="0fibiprx5xg8xdn5rdszk8iyw2m1mqq623r4k5fd4k1alsi28kl0"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGGdzPathwaysGEO KEGGREST limma nlme]; }; + PAIRADISE = derive2 { name="PAIRADISE"; version="1.6.0"; sha256="1gca2n30kwpw4465qz2q6raq8kzn4iqxy5h7l5srmwhcq0nkz40j"; depends=[abind BiocParallel nloptr S4Vectors SummarizedExperiment]; }; + PANR = derive2 { name="PANR"; version="1.36.0"; sha256="0yw82gybyb49rd15vicsklw0b08l62miyg6jly465sa0ffyyzvri"; depends=[igraph MASS pvclust RedeR]; }; + PAST = derive2 { name="PAST"; version="1.6.0"; sha256="19id9icnzsjhnpqg41fwvfk6ck67c5yc2wwlkd0yncksb7srwp5g"; depends=[doParallel dplyr foreach GenomicRanges ggplot2 iterators qvalue rlang rtracklayer S4Vectors]; }; + PCAN = derive2 { name="PCAN"; version="1.18.0"; sha256="00b2f53fm5czkwdx7yh7ycn2zih9c6bxq2a4mnyp4hz37b3v798r"; depends=[BiocParallel]; }; + PCAtools = derive2 { name="PCAtools"; version="2.2.0"; sha256="1fz9h99yyn49b5rcnkg2kjdfmczfwnc44fpwbia0izj6gx192phb"; depends=[beachmat BH BiocParallel BiocSingular cowplot DelayedArray DelayedMatrixStats dqrng ggplot2 ggrepel lattice Matrix Rcpp reshape2]; }; + PCpheno = derive2 { name="PCpheno"; version="1.52.0"; sha256="1hgzgajd5gp5pkkp01idrczprahh3x2pi5jg6d9vi1p3112q3953"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; }; + PECA = derive2 { name="PECA"; version="1.26.0"; sha256="1ww9vb00j7hskk26qjkxxil51brgax468p0kwv6wrj8jq514cajy"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; }; + PERFect = derive2 { name="PERFect"; version="1.4.0"; sha256="0hjbmq9j31mcyywmx63j8wsh7pnmgc6ax85qslx8dzdl828ggwwc"; depends=[fitdistrplus ggplot2 Matrix phyloseq psych sn zoo]; }; + PGA = derive2 { name="PGA"; version="1.20.0"; sha256="0mfcjrr3vknj456xffndggpfcsiqp8nyk287n7y4if9hllsg4axf"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table dplyr GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap processx RCurl readr Rsamtools RSQLite rtracklayer S4Vectors seqinr stringr VariantAnnotation]; }; + PICS = derive2 { name="PICS"; version="2.34.0"; sha256="1kmgz09p74p1giklscmv434i5fz1jadqzh78rl04w8lk1m1cpmq9"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools]; }; + PING = derive2 { name="PING"; version="2.34.0"; sha256="17jhb9592k9jl4cyjwn49wr2yw0afgs1qp6l43yf589ack9sbhpc"; depends=[BiocGenerics BSgenome fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; + PLPE = derive2 { name="PLPE"; version="1.50.0"; sha256="19hvg6gxykc84gx2vcka48wh18iiq6984dp0pnhrd1vrfl8qpypx"; depends=[Biobase LPE MASS]; }; + POMA = derive2 { name="POMA"; version="1.0.0"; sha256="15q92070s6bvv443ypff51paqmq5fnymf53lb8mhsfrdcscnlh8d"; depends=[Biobase broom caret clisymbols ComplexHeatmap crayon dplyr e1071 ggcorrplot ggplot2 ggraph ggrepel glasso glmnet impute knitr limma magrittr mixOmics MSnbase patchwork plotly qpdf randomForest RankProd reshape2 rmarkdown tibble tidyr vegan]; }; + POST = derive2 { name="POST"; version="1.14.0"; sha256="1inwdzhj9p69nziqbamz6ycxvgh3i88418bhr6xvdziwq2245987"; depends=[Biobase CompQuadForm GSEABase Matrix survival]; }; + PPInfer = derive2 { name="PPInfer"; version="1.16.0"; sha256="0n93yg4fsnrag9bb93mygafaq5y9yp7kchd1gph042lvbb6hvv1z"; depends=[biomaRt fgsea ggplot2 igraph kernlab STRINGdb yeastExpData]; }; + PREDA = derive2 { name="PREDA"; version="1.36.0"; sha256="06f54qayprzfl7z0cp56yjxcsb8yfnsk59600q4cm7wqc0hlwnbm"; depends=[annotate Biobase lokern multtest]; }; + PROMISE = derive2 { name="PROMISE"; version="1.42.0"; sha256="15ngkkdpwkskjmmgz1zxrqva5crszkx4867v5n52gbjndkqc28cy"; depends=[Biobase GSEABase]; }; + PROPER = derive2 { name="PROPER"; version="1.22.0"; sha256="0g79c3hxnv3n9hnqf5sdhss8crmdpnbgpsppb0vgwd425g3kvhxp"; depends=[edgeR]; }; + PROPS = derive2 { name="PROPS"; version="1.12.0"; sha256="0wz8jz8n271sxbca4xjgnmv7pj2xn5lm0phy3vykwnirsmjkb8sr"; depends=[Biobase bnlearn reshape2 sva]; }; + PROcess = derive2 { name="PROcess"; version="1.66.0"; sha256="1j7n75fqncd05lywih70y3bwk8s25pcvzx1a1nmfdspswv0mr6wb"; depends=[Icens]; }; + PSEA = derive2 { name="PSEA"; version="1.24.0"; sha256="1fw2bmdvwkw1bny21lriipjf2idkf4cx8vmh36kz9x5rwzbw7939"; depends=[Biobase MASS]; }; + PSICQUIC = derive2 { name="PSICQUIC"; version="1.28.0"; sha256="1qxs981s4ic3f5ihzl3292ylq90dakjl0g8vry9mds5zd1xb2i8k"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; + PWMEnrich = derive2 { name="PWMEnrich"; version="4.26.0"; sha256="1wvqj4i4ik664cnc2sl6n292zwsbrsj8lp28y1xfwrlgfqfrnibp"; depends=[BiocGenerics Biostrings evd gdata S4Vectors seqLogo]; }; + PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.18.0"; sha256="0qvqibj53mw9hdx466wq92z1nyl8xrd4q1sr0lzkjmnvi2z08av1"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; }; + Path2PPI = derive2 { name="Path2PPI"; version="1.20.0"; sha256="0y2m5vcifjyrdrnj4w2dmd9rjkj8m2a3jmkvh60wggli4dx7xzpg"; depends=[igraph]; }; + PathNet = derive2 { name="PathNet"; version="1.30.0"; sha256="1q3ipc4r2w3hg7yac8cj4i5fjqc74wqzr2jdcbbb1zp7c94hcyw5"; depends=[]; }; + PathoStat = derive2 { name="PathoStat"; version="1.16.0"; sha256="05hf4i66b7kn3gy0jdl690x190i6h2f72msl47hnskmxrn9zpb9v"; depends=[ape BiocStyle ComplexHeatmap corpcor DESeq2 devtools dplyr DT edgeR ggplot2 glmnet gmodels knitr limma matrixStats phyloseq plotly plyr RColorBrewer rentrez reshape2 ROCR scales shiny shinyjs tidyr vegan webshot XML]; }; + PeacoQC = derive2 { name="PeacoQC"; version="0.99.25"; sha256="1qqcnlsw8fqqrq2xnajr98mb05p37vg2g47qkx5mg826zdgffq6l"; depends=[circlize ComplexHeatmap flowCore flowWorkspace ggplot2 gridExtra plyr]; }; + PepsNMR = derive2 { name="PepsNMR"; version="1.8.1"; sha256="09xbfi0ch4n9zvsamfy3k1v3za7sf5d0f4bkzc2y59r1qa2zgn1r"; depends=[ggplot2 gridExtra Matrix matrixStats ptw reshape2]; }; + PharmacoGx = derive2 { name="PharmacoGx"; version="2.2.4"; sha256="10dr7dkaqayy8i5n762a246r36kfs1a8x00asdhxs56srwxw628l"; depends=[Biobase BiocParallel caTools CoreGx data_table downloader ggplot2 jsonlite magicaxis RColorBrewer reshape2 S4Vectors SummarizedExperiment]; }; + PhenStat = derive2 { name="PhenStat"; version="2.26.0"; sha256="0npf9ddmfh6752cjzmjxzvmp4sl0ml32xjiwii1f76416n0l6jla"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; }; + PhosR = derive2 { name="PhosR"; version="1.0.0"; sha256="0lpfwqz1z85lwn249kzf1bz4w3dympydacd67m7ls8wgr1m6zk58"; depends=[calibrate circlize dendextend dplyr e1071 igraph limma pcaMethods pheatmap preprocessCore RColorBrewer rlang ruv tidyr]; }; + PhyloProfile = derive2 { name="PhyloProfile"; version="1.4.11"; sha256="1g0hjk58w5srbnszjbccgc7ir8ykqmc0m5hxbq2qiv82la1hadgm"; depends=[ape BiocStyle bioDist Biostrings colourpicker data_table DT energy ExperimentHub ggplot2 gridExtra OmaDB pbapply plyr RColorBrewer shiny shinyBS shinyjs xml2 zoo]; }; + Pi = derive2 { name="Pi"; version="2.2.1"; sha256="16xq9d5hm6wlnjj9qajk177a7barnbr8dlk7c8xfmanrqsjxvck0"; depends=[BiocGenerics caret dnet dplyr GenomeInfoDb GenomicRanges ggbio ggnetwork ggplot2 ggrepel glmnet Gviz igraph IRanges lattice MASS Matrix osfr plot3D purrr randomForest RCircos readr ROCR scales supraHex tibble tidyr]; }; + Pigengene = derive2 { name="Pigengene"; version="1.16.0"; sha256="1bh7bkmwczs7lmylxmy4bm2sz3h2ymkwr6y3pbgsdkgpjpjdk00r"; depends=[bnlearn C50 dplyr gdata GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; + PloGO2 = derive2 { name="PloGO2"; version="1.2.0"; sha256="1ccncgam6absw32l5hjvzw3hdbr9fj92c0d65xw4i623amw3cana"; depends=[GO_db GOstats httr lattice openxlsx xtable]; }; + PoTRA = derive2 { name="PoTRA"; version="1.6.0"; sha256="185lf93amfad57l7pr7iyz2q5wycrilph7y2gzcdfz2pj9q9na7c"; depends=[BiocGenerics graph graphite igraph org_Hs_eg_db]; }; + Polyfit = derive2 { name="Polyfit"; version="1.24.0"; sha256="0xpsza6dzjwnm152bpgsc06cq9kvjd4v29x1syl4zfr7yzp9kvgb"; depends=[]; }; + PrInCE = derive2 { name="PrInCE"; version="1.6.0"; sha256="0mfm3jpnk1lps5c3dbwkmj9zl9ja2k27y129rkz8fpanyv91pyr3"; depends=[Biobase dplyr forecast Hmisc LiblineaR magrittr MSnbase naivebayes progress purrr ranger Rdpack robustbase speedglm tester tidyr]; }; + PrecisionTrialDrawer = derive2 { name="PrecisionTrialDrawer"; version="1.6.0"; sha256="0zp3f7br9251cn9nrr2ij859pmf64xjjab14m7492vpckkj6zn7b"; depends=[BiocParallel biomaRt brglm cgdsr data_table DT GenomicRanges ggplot2 ggrepel googleVis httr IRanges jsonlite LowMACAAnnotation magrittr matrixStats RColorBrewer reshape2 S4Vectors shiny shinyBS stringr XML]; }; + Prostar = derive2 { name="Prostar"; version="1.22.10"; sha256="11cn0ny7aha2glrk6qkhb20rl4zknk95sfv39xb5xs78z7v4mq7q"; depends=[BiocManager colourpicker DAPAR DAPARdata data_table DT future highcharter htmlwidgets later promises R_utils rclipboard rhandsontable sass shiny shinyAce shinyBS shinycssloaders shinyjqui shinyjs shinythemes shinyTree shinyWidgets tibble webshot XML]; }; + ProtGenerics = derive2 { name="ProtGenerics"; version="1.22.0"; sha256="0yihxphgkshvfv1sn67wc4zvr2zlzws2j7ki3zabm6vyfkfdkfiz"; depends=[]; }; + ProteoMM = derive2 { name="ProteoMM"; version="1.8.0"; sha256="0sp2cqibk2lkxbzwpy6w8wvc3bc4afkmmg41nbp8qck2j95fafzh"; depends=[biomaRt gdata ggplot2 ggrepel gtools matrixStats]; }; + ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.20.0"; sha256="0wz3khiwgcxwz0n8gyaiacj44fz5rnljbzax05pzyzqmkkjzlqp9"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; + PubScore = derive2 { name="PubScore"; version="1.2.0"; sha256="1hhpbv8pq363c9pdp3krf1c22bdl9pfjc8vhl7dh0d1s6ry5jvqn"; depends=[dplyr ggplot2 ggrepel igraph intergraph network progress rentrez sna]; }; + PureCN = derive2 { name="PureCN"; version="1.20.0"; sha256="1hkplgs3bwwg84j7bh1r0hibsmxlffrw1bn5dc0r7l8k7kqmkiig"; depends=[BiocGenerics Biostrings data_table DNAcopy futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra IRanges Matrix RColorBrewer rhdf5 Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; }; + Pviz = derive2 { name="Pviz"; version="1.24.0"; sha256="1nzl9z5axp3jh8p094l4r63vaqjvs39bvnnvqjfz4qcavirsb6lj"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; + QDNAseq = derive2 { name="QDNAseq"; version="1.26.0"; sha256="1njka1ldaj12id3m2z8ghlrm2lg0n5pxsxyv5gpjnsiabnnaw6ph"; depends=[Biobase CGHbase CGHcall DNAcopy future future_apply GenomicRanges IRanges matrixStats R_utils Rsamtools]; }; + QFeatures = derive2 { name="QFeatures"; version="1.0.0"; sha256="03vk6358cif41pcqhyia6r3a5j3qaxk52ac1jski1idvq3x5l5i2"; depends=[AnnotationFilter Biobase BiocGenerics IRanges lazyeval MsCoreUtils MultiAssayExperiment ProtGenerics S4Vectors SummarizedExperiment]; }; + QSutils = derive2 { name="QSutils"; version="1.8.0"; sha256="1p3dvckb1qnk6xnm5fhvq8vw52dcx3g92zrr5d91irvdw8zz38i6"; depends=[ape BiocGenerics Biostrings psych]; }; + QUBIC = derive2 { name="QUBIC"; version="1.18.0"; sha256="0jq3x0rkpwim7fama68d8wv069ylhb0nhq4yi38lq3ijglqyf1j5"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; + Qtlizer = derive2 { name="Qtlizer"; version="1.4.0"; sha256="11i5ggds69ydkg0fdgim53blznz27w2ciwbgm0b8h03khf1k35ys"; depends=[curl GenomicRanges httr stringi]; }; + QuartPAC = derive2 { name="QuartPAC"; version="1.22.0"; sha256="0agmdx9bmm394yl83q43ly9mnmnrg3fddxsxx987ciwk9ckqhm4l"; depends=[data_table GraphPAC iPAC SpacePAC]; }; + QuasR = derive2 { name="QuasR"; version="1.30.0"; sha256="032m01q34nnmvbhcb2g3pz2fqmgcw5464m74m1m0h7x9bl04a5k8"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rhisat2 Rhtslib Rsamtools rtracklayer S4Vectors ShortRead]; }; + QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.24.0"; sha256="0rv1n22w3smaififkwr90v4amyy8dndd7w2z577dvkxjl1j6pbdw"; depends=[dplyr Rcpp yaml]; }; + R3CPET = derive2 { name="R3CPET"; version="1.22.0"; sha256="0gl9mgqhkvs0g9ck0lbjvfmc5h48l4cd0mv5ry608028ys2h7gmv"; depends=[BiocGenerics clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; + R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.40.0"; sha256="134v6a77mwkcvxj98bri2hlnlqz0zb3ij9gvqky6gmb48vn49s42"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; + R4RNA = derive2 { name="R4RNA"; version="1.18.0"; sha256="07z8x8zh90axladjq4b5vii48xg1d86chc6jf8sc5x9rqs0rnj42"; depends=[Biostrings]; }; + RBGL = derive2 { name="RBGL"; version="1.66.0"; sha256="016vyzgixb3gjpzi21rbs6ngnnqcxr77krwjjf1ldnzzj8vqrqsz"; depends=[BH graph]; }; + RBM = derive2 { name="RBM"; version="1.22.0"; sha256="19r55j2sfc302qnsiyhjg0hf3sqh601chm9y3igg6sfmj3024kcv"; depends=[limma marray]; }; + RBioinf = derive2 { name="RBioinf"; version="1.50.0"; sha256="18kjh813rv3rg8lqjz0l3413iz5dmn09d0jrjy53bfr9h9qc9h89"; depends=[graph]; }; + RCAS = derive2 { name="RCAS"; version="1.16.0"; sha256="0vdxml618vqvf8xyh0zxs307p9zby0cj9dqyiiz625ilyq1hkw2m"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gprofiler2 IRanges knitr pbapply pheatmap plotly plotrix proxy ranger rmarkdown RSQLite rtracklayer S4Vectors]; }; + RCASPAR = derive2 { name="RCASPAR"; version="1.36.0"; sha256="0a85cmma32jir279f6p32nzx9wksycp27f6px4vcbmdp5r46wrpf"; depends=[]; }; + RCM = derive2 { name="RCM"; version="1.6.0"; sha256="1cl33ll8db998zcgcn5n9wc6krwpykvcz4xzikb70yxwzpna9mhb"; depends=[alabama edgeR ggplot2 MASS nleqslv phyloseq RColorBrewer reshape2 tensor tseries VGAM]; }; + RCy3 = derive2 { name="RCy3"; version="2.10.2"; sha256="1x4picqjd715y045wac754rpmm0n9km9svx336qybp8grvh3hfpb"; depends=[BiocGenerics graph httr igraph R_utils RJSONIO XML]; }; + RCyjs = derive2 { name="RCyjs"; version="2.12.0"; sha256="1176ynr6w5g2wgv6ayzsjmhnpm9nk82ah1lpy8b1aw2b1vz9m1dg"; depends=[base64enc BiocGenerics BrowserViz graph httpuv]; }; + RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.28.0"; sha256="0k79gz9q6rhfvdzzy3kk53x7qhcfy8abc9lxm4cbc0g5i7gyab48"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; }; + RDRToolbox = derive2 { name="RDRToolbox"; version="1.40.0"; sha256="1z44xkm1dfj17vmfzfnfrz70p97xag5w3q0hfan90hkyqh9gmhzm"; depends=[MASS rgl]; }; + REBET = derive2 { name="REBET"; version="1.8.0"; sha256="10xr81wm8dk07w3kxg7x90yc4hr71k5j9q0y3xy1q4q0xz64cni1"; depends=[ASSET]; }; + REDseq = derive2 { name="REDseq"; version="1.36.0"; sha256="15snzi15zzz146lcjq8a1pdizi190rl5lb8vcjybfrfnhqkjp5nv"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; + REMP = derive2 { name="REMP"; version="1.14.0"; sha256="1yhsma1akk2gj70sp0mb45kzslb96y7g0bxb5hm0f5lmyyhwymd1"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome caret doParallel foreach GenomeInfoDb GenomicRanges impute IRanges iterators kernlab minfi org_Hs_eg_db ranger readr rtracklayer S4Vectors settings SummarizedExperiment]; }; + RGMQL = derive2 { name="RGMQL"; version="1.10.0"; sha256="021hn0ws47imhqdcc6ywlwbsjjykqr070hrg4ncb9hid1wfshjqy"; depends=[BiocGenerics data_table dplyr GenomicRanges glue httr plyr RGMQLlib rJava rtracklayer S4Vectors xml2]; }; + RGSEA = derive2 { name="RGSEA"; version="1.24.0"; sha256="0xflgqzd7w8jscvpqfr271wi6kp46f98g5lz51hgxidjlq8ay7mh"; depends=[BiocGenerics]; }; + RGalaxy = derive2 { name="RGalaxy"; version="1.34.0"; sha256="1kk5nka7bm8w1lmjh05gmyy5ccf6glq3z9xrp89114g5bqdzcxf0"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; }; + RGraph2js = derive2 { name="RGraph2js"; version="1.18.0"; sha256="0axmchp0i9chh2ihf8hm3kq9frn09wgjr2ph9xvbcbmfa79bj1qg"; depends=[digest graph rjson whisker]; }; + RIPAT = derive2 { name="RIPAT"; version="1.0.0"; sha256="1qvxvd2hw2ipzpy8v0r9yzq6r8rspn22q44377ikqvwnpahcj13s"; depends=[biomaRt GenomicRanges ggplot2 IRanges karyoploteR openxlsx plyr regioneR rtracklayer stringr]; }; + RITAN = derive2 { name="RITAN"; version="1.14.0"; sha256="0vxy3l9dyjasbjzrrh08nh23ic8ssr8r9z1mlnnyvy4wqqp2hx14"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png RColorBrewer reshape2 RITANdata sqldf STRINGdb]; }; + RIVER = derive2 { name="RIVER"; version="1.14.0"; sha256="116c0l1inc8h7fdl58p8wxg779lxmwwjvkv02825x32nqxzqpy7w"; depends=[Biobase ggplot2 glmnet pROC]; }; + RImmPort = derive2 { name="RImmPort"; version="1.18.0"; sha256="0wqafg0lqj6m3hxkcahlix1p0sa9yvqwh526k5px222ca53pr9q8"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; + RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.14.0"; sha256="1dkm0q9kim1641iyj5qr434p0b148gz0dcp3zpqzzjcm1zhh8wck"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; + RLMM = derive2 { name="RLMM"; version="1.52.0"; sha256="0gk3zmw4qhyqy5byv3yrsv8gi5ndlvm4c4cifv1mwgclnk4dwka1"; depends=[MASS]; }; + RMassBank = derive2 { name="RMassBank"; version="3.0.0"; sha256="18wnr21qsrv51rb3xpj54cwr3yigd5aap8ljbz1x6pb9p2rhg2x9"; depends=[assertthat Biobase digest enviPat httr MSnbase mzR rcdk Rcpp rjson S4Vectors XML yaml]; }; + RNAAgeCalc = derive2 { name="RNAAgeCalc"; version="1.2.0"; sha256="04y2djgjgvs0cszsnxvgpm37msc40pbvl59r9i2y53nqqhqmnmhx"; depends=[AnnotationDbi ggplot2 impute org_Hs_eg_db recount SummarizedExperiment]; }; + RNASeqPower = derive2 { name="RNASeqPower"; version="1.30.0"; sha256="0nwz8vy4yfamrimgycm4a9g3880d08dzxkyp6klrxk8cx8bky667"; depends=[]; }; + RNASeqR = derive2 { name="RNASeqR"; version="1.8.0"; sha256="1m1bs07c0jdgklxp4hxaz08ggvhm7h2ink3fmsn91awbaamdds2j"; depends=[ballgown Biostrings clusterProfiler corrplot DESeq2 DOSE edgeR factoextra FactoMineR ggplot2 gridExtra org_Hs_eg_db org_Sc_sgd_db pathview PerformanceAnalytics pheatmap rafalib reshape2 reticulate Rsamtools stringr systemPipeR systemPipeRdata]; }; + RNAdecay = derive2 { name="RNAdecay"; version="1.10.0"; sha256="0v8x6a3bx2l7xs306lx6iyjwkz73f5vlzd1jahjwc11kgy2470ci"; depends=[ggplot2 gplots nloptr scales TMB]; }; + RNAinteract = derive2 { name="RNAinteract"; version="1.38.0"; sha256="0a7kbvb8k90sh9ldc16qz915ysam2f12cnwvynpfd926xpkqqi82"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; + RNAither = derive2 { name="RNAither"; version="2.38.0"; sha256="1hhhv5ak7p040lcq0ayxvfrwld6qgkc80gabvvvp5zc18bynhdia"; depends=[biomaRt car geneplotter limma RankProd splots topGO]; }; + RNAmodR = derive2 { name="RNAmodR"; version="1.4.2"; sha256="0rhrpmq09zq6mq8bxdmds766mkh48r8nj3ln8r0wbswgq2kjf208"; depends=[BiocGenerics BiocParallel Biostrings BSgenome colorRamps GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges matrixStats Modstrings RColorBrewer reshape2 ROCR Rsamtools rtracklayer S4Vectors]; }; + RNAmodR_AlkAnilineSeq = derive2 { name="RNAmodR.AlkAnilineSeq"; version="1.4.0"; sha256="13adv66g2zch415sx62sph9f2ydp8jmin0pmis4ralx4ysznkifg"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; }; + RNAmodR_ML = derive2 { name="RNAmodR.ML"; version="1.4.0"; sha256="04mnq6h8rwrlazrg2dhzfcfgpm5r9qi7k7cwzf2pns8cx3np25q3"; depends=[BiocGenerics GenomicRanges IRanges ranger RNAmodR S4Vectors]; }; + RNAmodR_RiboMethSeq = derive2 { name="RNAmodR.RiboMethSeq"; version="1.4.0"; sha256="04aq3wrmxdzydqkbyp36qy1cp8gqr52kl3jwpilhc484vy8cxphl"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; }; + RNAprobR = derive2 { name="RNAprobR"; version="1.22.0"; sha256="0527aqzhcm051g0kybnjg5djmfizbhvzsmw3zih85sy8fxypwcma"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr Rsamtools rtracklayer S4Vectors]; }; + RNAsense = derive2 { name="RNAsense"; version="1.4.0"; sha256="05ijjqanh6f1n75yi822vbs631516zhvlciqg4x22c1hznd8k7yw"; depends=[ggplot2 NBPSeq qvalue SummarizedExperiment]; }; + ROC = derive2 { name="ROC"; version="1.66.0"; sha256="02b9n42z3kjrfxpdf3glqvimd79nhnycq00mb09fzhkpp5zl43c9"; depends=[knitr]; }; + ROCpAI = derive2 { name="ROCpAI"; version="1.2.0"; sha256="0cp6k6nn7q1ssfdiwx1dx1nfzw2az5dw39g2bljw57vs0457s26q"; depends=[boot fission knitr SummarizedExperiment]; }; + ROSeq = derive2 { name="ROSeq"; version="1.2.10"; sha256="1mydcfcqkbmc2dr8nxy1fs0slgwvzbarpjz3vjqj5q3f44jbxcay"; depends=[edgeR limma pbmcapply]; }; + ROTS = derive2 { name="ROTS"; version="1.18.0"; sha256="0qk0gfhgr14g13zlfyf5101b5s8cma7j3r8a92q93h0axy8ka23n"; depends=[Biobase Rcpp]; }; + ROntoTools = derive2 { name="ROntoTools"; version="2.18.0"; sha256="1shj6hazl8d9rxpfr10rg1bd6nxhvmzrfarq4rpxpwnqgry68q2z"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; + RPA = derive2 { name="RPA"; version="1.46.0"; sha256="02if4wq1jmls8g63hpx1q26x9cx6nbfg5s6rrmlrq0fsrk28wl7y"; depends=[affy BiocGenerics phyloseq]; }; + RProtoBufLib = derive2 { name="RProtoBufLib"; version="2.2.0"; sha256="09n4ny3ymfkja2br4rrr2n9dzw3hs7qijhcq4mj0avr86i27llqz"; depends=[]; }; + RRHO = derive2 { name="RRHO"; version="1.30.0"; sha256="04hjp0kzfa8nwsm3yjy62sgidjy59rvzr512glhp9mgcf10lq4ws"; depends=[VennDiagram]; }; + RSVSim = derive2 { name="RSVSim"; version="1.30.0"; sha256="1hiw5b1idvyqr6ypjyy9vc2y48gjhnhdz1682ajpymjv6z54hnk3"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; + RSeqAn = derive2 { name="RSeqAn"; version="1.10.0"; sha256="0w1gr8c0jzavaf0l563a83cg7w6p2zxz3w5raxvlf42jzb86w8mw"; depends=[Rcpp]; }; + RTCA = derive2 { name="RTCA"; version="1.42.0"; sha256="17c09kc39ifpbnnhyikd20ng9z1dab2lds4cissgap266ik9y2c9"; depends=[Biobase gtools RColorBrewer]; }; + RTCGA = derive2 { name="RTCGA"; version="1.20.0"; sha256="0wnms4zwm3whxdxw5qw8xmkka9lwbnpyb8zqpk9vi3xgirnqjfr8"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; + RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.20.0"; sha256="1sh2akzhqf0gm3c2bway8a4i05lsqlny0wvixlilyxi5fgz839w7"; depends=[BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges httr limma RaggedExperiment RCircos RCurl RJSONIO S4Vectors stringr SummarizedExperiment survival TCGAutils XML]; }; + RTN = derive2 { name="RTN"; version="2.14.1"; sha256="0nsqs85icjhrpmyj311axivp5x8vrdi6csbng6377qr3lsm37xa6"; depends=[car data_table igraph IRanges limma minet mixtools pheatmap pwr RedeR S4Vectors snow SummarizedExperiment viper]; }; + RTNduals = derive2 { name="RTNduals"; version="1.14.1"; sha256="08za6h73zbdz4mfsglhkfz1pjf476011a018vpvz1m4mkvias85f"; depends=[RTN]; }; + RTNsurvival = derive2 { name="RTNsurvival"; version="1.14.1"; sha256="02sphk1ivspkb8jnnppwrm0jpb5aa50f1yqpcxibh9049bc34bqn"; depends=[data_table dunn_test egg ggplot2 pheatmap RColorBrewer RTN RTNduals scales survival]; }; + RTopper = derive2 { name="RTopper"; version="1.36.0"; sha256="1wjwzdqri60073f2iwh67vc1d3z5fiwmcd8xdf6lpqynbi7byxmj"; depends=[Biobase limma multtest]; }; + RUVSeq = derive2 { name="RUVSeq"; version="1.24.0"; sha256="1anrybyrzpajr5434svyfbaypjai6x0ifsmqvjgimmxq3xqhv0jh"; depends=[Biobase EDASeq edgeR MASS]; }; + RUVcorr = derive2 { name="RUVcorr"; version="1.22.0"; sha256="0kvvallbqha0a9w2cbvqbivz0v2bsz2i7mzrw7x1810k4i2hjrdg"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; + RUVnormalize = derive2 { name="RUVnormalize"; version="1.24.0"; sha256="1zjgq2djwz3dc346hxqrxbmrnqxj02cxkxalcj6q996x7i01r9qg"; depends=[Biobase RUVnormalizeData]; }; + RVS = derive2 { name="RVS"; version="1.12.0"; sha256="03mx0vfzla9ag87lf2f1yr8mz42r8blibx9zrdajz2r4a73xa8x0"; depends=[GENLIB gRain kinship2 snpStats]; }; + RadioGx = derive2 { name="RadioGx"; version="1.0.0"; sha256="0p7cdm5hws1nmmjnrhwr2f5pgnjrc86973kxac6lckpl0cvr8h1r"; depends=[assertthat Biobase BiocParallel caTools CoreGx downloader magicaxis matrixStats RColorBrewer reshape2 S4Vectors scales SummarizedExperiment]; }; + RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.14.2"; sha256="1pfscnxjxpc2v8n5ly0505ncfml9ya288fccmx1jnaz3vmahycks"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix MatrixGenerics S4Vectors SummarizedExperiment]; }; + RandomWalkRestartMH = derive2 { name="RandomWalkRestartMH"; version="1.10.0"; sha256="0cp9ly4334x3jvcmxz2yg4n7rp7n3immjsaq3mnzidf2acgpqbzl"; depends=[dnet igraph Matrix]; }; + RankProd = derive2 { name="RankProd"; version="3.16.0"; sha256="0fm81fgf1pk05g74qxi140bxxgrzqq9agi1nshazkc7wc3hbshl8"; depends=[gmp Rmpfr]; }; + RareVariantVis = derive2 { name="RareVariantVis"; version="2.18.0"; sha256="01yv365dby8lkg9a0ahmz3r6xhqf1ccs4nmch5y23f4hfzlqzgmi"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + Rariant = derive2 { name="Rariant"; version="1.25.0"; sha256="0bns37cg842lvlvb19lvgiylb6k7xas1war56rwkn32xc9scz46r"; depends=[BiocGenerics dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; }; + RbcBook1 = derive2 { name="RbcBook1"; version="1.58.0"; sha256="08qaz12mjvmw2zabiisiw837409g1fjqiavyc4wckp5pc5qxi5k2"; depends=[Biobase graph rpart]; }; + Rbowtie = derive2 { name="Rbowtie"; version="1.30.0"; sha256="0rgxqc3sbq7phnrn9a6z361725h4zi2mi985i43n7fi3csif7507"; depends=[]; }; + Rbowtie2 = derive2 { name="Rbowtie2"; version="1.12.0"; sha256="1pcdcqn82ray73bajjnx5zgs98m56acviq3adbzga0cfqf6wiqx5"; depends=[]; }; + Rcade = derive2 { name="Rcade"; version="1.32.0"; sha256="1r6x9jfyvrpa6cfax4gnxymmnv2swfzr8whfy8b3pq0bv69p97hm"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; }; + RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.30.0"; sha256="0vbl2nbyvm41jqf7lzv9x76yyjf0qpgia67csrf6xr9dcb8j2499"; depends=[graph Rgraphviz sfsmisc]; }; + RcisTarget = derive2 { name="RcisTarget"; version="1.10.0"; sha256="0a711jzxl1kggpk3ln68xzc5y30my4nbs1mxx8951pyi3jvzjfyf"; depends=[AUCell BiocGenerics data_table feather GSEABase R_utils SummarizedExperiment]; }; + Rcpi = derive2 { name="Rcpi"; version="1.26.0"; sha256="19nnkypcz7hfyas5l0lykm45a6d41pbhpi1q6v1hzh0mmdsa9vki"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; + Rcwl = derive2 { name="Rcwl"; version="1.6.0"; sha256="08rzp0x3na5g7s9mw9paj869ppgz9ckmq1rzhqww394kdaw3b4a5"; depends=[batchtools BiocParallel codetools DiagrammeR R_utils S4Vectors shiny yaml]; }; + RcwlPipelines = derive2 { name="RcwlPipelines"; version="1.6.2"; sha256="0mj2s5084jjxiipwrpfr3cld47m2p5sknbbpmqk49r0ybwv0k2rb"; depends=[BiocFileCache rappdirs Rcwl]; }; + Rdisop = derive2 { name="Rdisop"; version="1.50.0"; sha256="1nccrjk8l3lg8jqagnfnsypk190hxcwy8pv5m1wlfl5hjjia05x9"; depends=[Rcpp]; }; + ReQON = derive2 { name="ReQON"; version="1.36.0"; sha256="1yz0r0rrk4n6dnqbdq41lvs5z8l6vkx729m0a7f29svw4dbc6mdq"; depends=[rJava Rsamtools seqbias]; }; + ReactomeGSA = derive2 { name="ReactomeGSA"; version="1.4.2"; sha256="1gjvgs8a2bb1g356qi2fv9ynxm61j67542cfn6yg8c2fgwpfxk61"; depends=[ggplot2 gplots httr jsonlite progress RColorBrewer]; }; + ReactomePA = derive2 { name="ReactomePA"; version="1.34.0"; sha256="04b2ng9jp2bsfbg3wnbg6m6a5c3szcmbypk1lx34i63228g8z98m"; depends=[AnnotationDbi DOSE enrichplot ggplot2 ggraph graphite igraph reactome_db]; }; + ReadqPCR = derive2 { name="ReadqPCR"; version="1.36.0"; sha256="1xpcngb8bpabah7flm3bcg37lsw9qdad9a5994nw2b6hyhylxv2n"; depends=[Biobase]; }; + RedeR = derive2 { name="RedeR"; version="1.38.0"; sha256="1v51alvya580d77cqy403x3wysg6yip4crpnna35jdyhmwijajcm"; depends=[igraph]; }; + RefPlus = derive2 { name="RefPlus"; version="1.60.0"; sha256="07vv7r0aahmbs5c596g8qnvka8lydziwdpv99fajys92vvljnf85"; depends=[affy affyPLM Biobase preprocessCore]; }; + RegEnrich = derive2 { name="RegEnrich"; version="1.0.1"; sha256="1ajzqfwi6gcv409a5sakfvc2c2w618d91bfxalrwhxq3scbri7jc"; depends=[BiocParallel BiocSet DESeq2 DOSE dplyr fgsea ggplot2 limma magrittr randomForest reshape2 S4Vectors SummarizedExperiment tibble WGCNA]; }; + RepViz = derive2 { name="RepViz"; version="1.6.0"; sha256="1ias47j7k4r67nn5cljx32fg80917azqa8xgn3gkilq2fxnz73qf"; depends=[biomaRt GenomicRanges IRanges Rsamtools S4Vectors]; }; + Repitools = derive2 { name="Repitools"; version="1.36.0"; sha256="1il21djzcw9zyfv3vn1n9nb91xvjla8s18l99w9d9h4jmkj6s5p6"; depends=[BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; + ReportingTools = derive2 { name="ReportingTools"; version="2.30.2"; sha256="1vvra7l29s7lnq996nwlpzbkrbdkr3ivkgmfp4kndfykxsl9q4vb"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; + ResidualMatrix = derive2 { name="ResidualMatrix"; version="1.0.0"; sha256="1njzyrmfqw9nz1f8z496kysx5kfi3b10b29jj9vqx3xlk935fg71"; depends=[DelayedArray Matrix S4Vectors]; }; + Rfastp = derive2 { name="Rfastp"; version="1.0.0"; sha256="19g8di5ddsp8kx1v5ai0rb2i6irf38c14x8pn966xgmivy6zxfbx"; depends=[ggplot2 Rcpp reshape2 Rhtslib rjson zlibbioc]; }; + Rgin = derive2 { name="Rgin"; version="1.10.0"; sha256="1g55fgskkxyqq5w3i51n10a3812pv4xlasi5ylacjva5h7k2blnv"; depends=[RcppEigen]; }; + Rgraphviz = derive2 { name="Rgraphviz"; version="2.34.0"; sha256="1k0nrskak2v5xv7za226r3wypja3zxxmmc0cxz2imjhlgnkbha77"; depends=[graph]; }; + Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.12.1"; sha256="14fnq4gijxp2l7985pksfk52i6klvy81r3892lnna73c6hh1dj28"; depends=[]; }; + Rhisat2 = derive2 { name="Rhisat2"; version="1.6.0"; sha256="0f9x2qcazml0zjcgyy0kdphnww4d1m62rn0ijcqlhy1bng6ihwwb"; depends=[GenomicFeatures GenomicRanges SGSeq]; }; + Rhtslib = derive2 { name="Rhtslib"; version="1.22.0"; sha256="18wag2jnpda6078xjkpfdvar1gkb2myhw83gg03l39sabh35qya4"; depends=[zlibbioc]; }; + RiboProfiling = derive2 { name="RiboProfiling"; version="1.20.0"; sha256="112071w7aw7cwckipq0dll1lssl7pwafma4v9jj9sx12rjcj57xg"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; + Ringo = derive2 { name="Ringo"; version="1.54.0"; sha256="1603bjjn2gfqs32j7h4kmxp3jfkfy57bxdpfh6b9jrl47dlyjp46"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; + Risa = derive2 { name="Risa"; version="1.32.0"; sha256="1wyidjrhrj1f1z4y4cik3p0qxm000w27hsyi768ql31ygddm0j0b"; depends=[affy Biobase biocViews Rcpp xcms]; }; + Rmagpie = derive2 { name="Rmagpie"; version="1.46.0"; sha256="11pl8kwpzk9b1wnipph8cpwz4wi1bf66yi62hvnyfi74ldyjqli9"; depends=[Biobase e1071 kernlab pamr]; }; + RmiR = derive2 { name="RmiR"; version="1.46.0"; sha256="0g8i7qzvkinq6r9lhv41k2mpan8yvv7x7fxxg8mkjdw1k12rsl6g"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; + Rmmquant = derive2 { name="Rmmquant"; version="1.8.1"; sha256="1sfm9qazwgmcf9qga6g182nq0g94l0ajihrypqsmzq90al1sx5dv"; depends=[BiocStyle DESeq2 devtools GenomicRanges org_Mm_eg_db Rcpp S4Vectors SummarizedExperiment TBX20BamSubset TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + RnBeads = derive2 { name="RnBeads"; version="2.8.1"; sha256="0f6j5x8w3j3fckaq5270gb8fwqd51qpf58n9qch8kh35l49rqi9h"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; }; + RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="2.0.0"; sha256="19h4vz25wcvp428vygn2cw1abwbjqxac8vy6l0y8lld5p9f91hh0"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; }; + Rnits = derive2 { name="Rnits"; version="1.24.0"; sha256="0nkafam4glwv4makj47b25f6vr693pz891lbbam8z73j0ddqi3ai"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; + RpsiXML = derive2 { name="RpsiXML"; version="2.32.0"; sha256="1ps9xp1bvq5iml09arw27pa6chgm39hhc94pdb54z0c04gz2mzln"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; + Rqc = derive2 { name="Rqc"; version="1.24.0"; sha256="083c3ql0gndb6y7m9d3rpbkimyw8cj8jyv77mwwjhq49lzwsg6n9"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; + Rsamtools = derive2 { name="Rsamtools"; version="2.6.0"; sha256="040pggkwglc6wy90qnc7xcdnaj0v3iqlykvvsl74241409qly554"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges Rhtslib S4Vectors XVector zlibbioc]; }; + Rsubread = derive2 { name="Rsubread"; version="2.4.3"; sha256="0c4akc89p5467n5rzq9bi7h0h15rbpqpvh7fw42qcj7g2vc41wba"; depends=[Matrix]; }; + Rtpca = derive2 { name="Rtpca"; version="1.0.0"; sha256="0cmibk1d62xzipxxp10xsb499v633mplv0ikacgfsfsl1pjdpk5g"; depends=[Biobase dplyr fdrtool ggplot2 pROC tibble tidyr]; }; + Rtreemix = derive2 { name="Rtreemix"; version="1.52.0"; sha256="00hdk91mkprsm7zfnq3bmsqldr6mjcbj08s8jis3wc475yqs6mir"; depends=[Biobase graph Hmisc]; }; + S4Vectors = derive2 { name="S4Vectors"; version="0.28.1"; sha256="0fhf4lsfxrim7glazh6ng46ykzaly5ggwpg170vcz4cc24prv0rh"; depends=[BiocGenerics]; }; + SAGx = derive2 { name="SAGx"; version="1.64.0"; sha256="1455nm0sbhyn36k8zg93ak204hqa2f95in7ximfayz6b2h4p0zka"; depends=[Biobase multtest]; }; + SAIGEgds = derive2 { name="SAIGEgds"; version="1.4.2"; sha256="0wr9dvrqgpryca7cvnn6ghb54hc3bnhq0b5vrmx80lvy5q3f28qj"; depends=[gdsfmt Rcpp RcppArmadillo RcppParallel SeqArray SPAtest]; }; + SBGNview = derive2 { name="SBGNview"; version="1.4.1"; sha256="0xy3r1v9l2bjzk44ylvqa70xqzpdpxgvjq5bz72hfxz6lf31aqkz"; depends=[AnnotationDbi bookdown httr igraph KEGGREST knitr pathview Rdpack rmarkdown rsvg SBGNview_data SummarizedExperiment xml2]; }; + SBMLR = derive2 { name="SBMLR"; version="1.86.0"; sha256="1bjcq6zfbm26wp07ygq45py363bfgly1258g5any0hr2ipaqkf3x"; depends=[deSolve XML]; }; + SC3 = derive2 { name="SC3"; version="1.18.0"; sha256="1pz43jkqqyk64rm6j0rcww0xggr2dsmnbg5jc2mg72zskgcgygp7"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; }; + SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.32.0"; sha256="1wmj2dfsnclv9a8nsinaadjc5l7p5b2n2bfshhmlqigmf67iqg1n"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; + SCANVIS = derive2 { name="SCANVIS"; version="1.4.0"; sha256="1fnkqxcc3cwd19k59phsw5q5wlsq601fisnwsw6nxnvhdbwbis1m"; depends=[IRanges plotrix RCurl rtracklayer]; }; + SCATE = derive2 { name="SCATE"; version="1.0.0"; sha256="0n17n7v1pyhbqniwzs2w9indw95qpccx6n452z7x9ikp3nivam8j"; depends=[GenomicAlignments GenomicRanges mclust preprocessCore Rtsne SCATEData splines2 xgboost]; }; + SCBN = derive2 { name="SCBN"; version="1.8.0"; sha256="1qnn3gsls5iyrjs4iinj4z68mlqf54mjyn12vvrhpqyfwdxjvwr9"; depends=[]; }; + SCFA = derive2 { name="SCFA"; version="1.0.0"; sha256="05f29gidi9mbhis6aaghgk77a46a7rzrq7kg9ag8qlm528rh8yr3"; depends=[BiocParallel cluster clusterCrit glmnet igraph keras Matrix matrixStats psych RhpcBLASctl survival tensorflow]; }; + SCOPE = derive2 { name="SCOPE"; version="1.2.0"; sha256="15lhgxmwl3v1r8dz9shlqljanb902fm3a0ap9a7mxbd10kmlk0n2"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DescTools DNAcopy doParallel foreach GenomeInfoDb GenomicRanges gplots IRanges RColorBrewer Rsamtools S4Vectors]; }; + SCnorm = derive2 { name="SCnorm"; version="1.12.1"; sha256="1f4b25n1dd1qfxc5mcvga1fbziw121l1kh9nzp3hxwbww3k2wihp"; depends=[BiocGenerics BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SingleCellExperiment SummarizedExperiment]; }; + SDAMS = derive2 { name="SDAMS"; version="1.10.0"; sha256="03dxkpm531q0pw4jsda60zlzlpfqy5rsi3j68qixqlg95l3fzgqz"; depends=[qvalue SummarizedExperiment trust]; }; + SELEX = derive2 { name="SELEX"; version="1.22.0"; sha256="02dk647r32as84la2lbv4hsqyan1h4khf8661xb0chlm9d9sr3gq"; depends=[Biostrings rJava]; }; + SEPIRA = derive2 { name="SEPIRA"; version="1.10.0"; sha256="1rn1yrvrgdr2dnxp3qhj98kx38ha9fz2abyi8rxqvllc9x9ibm5d"; depends=[corpcor limma]; }; + SEtools = derive2 { name="SEtools"; version="1.4.0"; sha256="16f5sx91m9pgr6h4wq2k9zw2qs45p77qfhwz4f0zdjw8g7abnl6g"; depends=[BiocParallel circlize ComplexHeatmap data_table edgeR openxlsx pheatmap randomcoloR S4Vectors seriation SummarizedExperiment]; }; + SGSeq = derive2 { name="SGSeq"; version="1.24.0"; sha256="1nfhy5kgyz56b6pyxcq8kflqwnhl9nlffszwpqb5fdh5ibz8xbjx"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; + SIAMCAT = derive2 { name="SIAMCAT"; version="1.10.0"; sha256="0cyfnnz2ldr8pq9i49p8rpdfbpfns42sdcdvqdpc14696j7zmbsh"; depends=[beanplot corrplot glmnet gridBase gridExtra infotheo LiblineaR matrixStats mlr ParamHelpers phyloseq pROC progress PRROC RColorBrewer scales stringr]; }; + SICtools = derive2 { name="SICtools"; version="1.20.0"; sha256="0sm4vqjpanf3qadmgxpnig816mp0lcirbbzs0nckzwnx0n2zqvp8"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; + SIM = derive2 { name="SIM"; version="1.60.0"; sha256="02q30195wk11d6bcnjdmhrgm1y79gbnh9mr8fywils3jvc8galfg"; depends=[globaltest quantreg quantsmooth]; }; + SIMAT = derive2 { name="SIMAT"; version="1.22.0"; sha256="02p20c1mqp2fwnf4jaaqdvflkm2lfggy7gl5hv9sj6jqbwn8140c"; depends=[ggplot2 mzR Rcpp reshape2]; }; + SIMD = derive2 { name="SIMD"; version="1.8.0"; sha256="0zhycbkjis470qbin5s8cwc7fpj6w6qmgr3s5ixzabjxwyyf1vrg"; depends=[edgeR methylMnM statmod]; }; + SIMLR = derive2 { name="SIMLR"; version="1.16.0"; sha256="07cvzwa5k8skjs903jyglpjrvz83qb7b5r8qbw8dcnmj9j9g6rrk"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; + SISPA = derive2 { name="SISPA"; version="1.20.0"; sha256="0sax3b59l81ahglmf0y1w066bil84nqxsiqb82daisi2lnqsifgz"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; }; + SLGI = derive2 { name="SLGI"; version="1.50.0"; sha256="0lvxvfq41d1bfhr88val3p544987hymz6b2mbd1xryiryjclvh1a"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; + SLqPCR = derive2 { name="SLqPCR"; version="1.56.0"; sha256="0hr05f3jn44f542mk5m5gpkxjw2xvcbvggc7jzyijgil54yhk8xz"; depends=[]; }; + SMAD = derive2 { name="SMAD"; version="1.6.0"; sha256="00ffpb7n3151ghfblgkl670hbng51yxsifbwyp6j84cmvn5137p2"; depends=[dplyr magrittr Rcpp RcppAlgos tidyr]; }; + SMAP = derive2 { name="SMAP"; version="1.54.0"; sha256="1flhy0is8jr3spq66z634wrkidpld5h5ick3c395nc2m2w97i0vh"; depends=[]; }; + SMITE = derive2 { name="SMITE"; version="1.18.0"; sha256="1my2w1y4h2kq26h2cjzhi651g522ziwc742dd9a5z0ljjrpgpcpn"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGGREST org_Hs_eg_db plyr reactome_db S4Vectors scales]; }; + SNAGEE = derive2 { name="SNAGEE"; version="1.30.0"; sha256="15hj3jvyx26rz7pj0lsxc8452bz1z5xjqmfw7igmjgfa8y1gd61m"; depends=[SNAGEEdata]; }; + SNPRelate = derive2 { name="SNPRelate"; version="1.24.0"; sha256="1rylg81633zwhafkzg4rc0dcx0wqhcvpgk5mj5kvlwwmjvy4csiv"; depends=[gdsfmt]; }; + SNPediaR = derive2 { name="SNPediaR"; version="1.16.0"; sha256="08zlqzrd9kan6kkamfhzkn39nvybddb2mv42sv6gg9yxhxw8gbpg"; depends=[jsonlite RCurl]; }; + SNPhood = derive2 { name="SNPhood"; version="1.20.0"; sha256="12xm7i8p42qbnx40p87ihqky24i1gf7df9sdw3aj47w0a2mkiz1i"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + SPEM = derive2 { name="SPEM"; version="1.30.0"; sha256="15wb6pgan6ilkz1yxm40hinjn5zqyf1iqdhj8f0s2cm64yggk58p"; depends=[Biobase Rsolnp]; }; + SPIA = derive2 { name="SPIA"; version="2.42.0"; sha256="0cp80yi368g38g101glxl2j5yfpxx4k44px7zdsssh1mcmxa62dj"; depends=[KEGGgraph]; }; + SPLINTER = derive2 { name="SPLINTER"; version="1.16.0"; sha256="04z80mwjgfgnb9c4xq09ygsw2s8h2x59k8gvvirl6j6swligam0m"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 googleVis Gviz IRanges plyr S4Vectors seqLogo stringr]; }; + SPONGE = derive2 { name="SPONGE"; version="1.12.0"; sha256="12zvhwpm6f2x0wn84fgy39ks35jfcbqjr8bzb0c6i8dn2khy286i"; depends=[Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; }; + SPsimSeq = derive2 { name="SPsimSeq"; version="1.0.0"; sha256="1z2mz9h9mvr7q9bmfh19hm6zajah08i2mnr2c59c255f4iyx6ysb"; depends=[edgeR fitdistrplus Hmisc limma mvtnorm phyloseq SingleCellExperiment WGCNA]; }; + SQLDataFrame = derive2 { name="SQLDataFrame"; version="1.4.2"; sha256="1115a2xfj72g2pwa5gd5s8fklkk14igavkfn6xzagybf7vs2h2ck"; depends=[BiocGenerics DBI dbplyr dplyr lazyeval RSQLite S4Vectors tibble]; }; + SQUADD = derive2 { name="SQUADD"; version="1.40.0"; sha256="0kan5979hfc3044daqj9basjs6chvmrsm8llfaf4mlwbqdfmrz44"; depends=[RColorBrewer]; }; + SRAdb = derive2 { name="SRAdb"; version="1.52.0"; sha256="1lmkb9wdp77h6bjy1bvjcfpzsm8bzmixq63fanrlyyqngxm553qg"; depends=[GEOquery graph RCurl RSQLite]; }; + SRGnet = derive2 { name="SRGnet"; version="1.16.0"; sha256="09a1vnj9v0sqnz2bsmlmvx6ahs3q3rnhq25wqfbzli1n0lcxk5i3"; depends=[EBcoexpress gbm Hmisc igraph limma MASS matrixStats pvclust]; }; + SSPA = derive2 { name="SSPA"; version="2.30.0"; sha256="1lszpy4pwy4ndx0l400n03gk90vdfk1dbawcpn53wsc1chw4ham8"; depends=[lattice limma qvalue]; }; + STAN = derive2 { name="STAN"; version="2.18.0"; sha256="1zxw6wi5v6pdzmbziidq589p1dz6klvcmglqqndnh2lwns7ggvf9"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; }; + STATegRa = derive2 { name="STATegRa"; version="1.26.0"; sha256="1df2wl6gnsrh5xazr5d5mncdp3ncvq4fjj4xv3scrjnwcrpw2ny6"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; + STRINGdb = derive2 { name="STRINGdb"; version="2.2.2"; sha256="0dr3b7pk7q4pl89ndahgnk3bv2xf2vxm2yjp7sfll6ml93xh2rp4"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; + STROMA4 = derive2 { name="STROMA4"; version="1.14.0"; sha256="0wvnqahydvpkplaajskalz2b6qgv1yfxbklv9j126msrhs40ni1m"; depends=[Biobase BiocParallel cluster matrixStats]; }; + SWATH2stats = derive2 { name="SWATH2stats"; version="1.20.1"; sha256="0jhq5g8a59g6s2yzs7sfq5pxz2r7a9wdgrp9lxch7pk18wyvzn8i"; depends=[biomaRt data_table ggplot2 reshape2]; }; + SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.44.0"; sha256="1xnhx1biw95c66pahj84mdj2lnshm8hlr953ljd9xzhjk1wam4k1"; depends=[]; }; + ScISI = derive2 { name="ScISI"; version="1.62.0"; sha256="0vp4zkgjd35lxvjy3bl938saqnc67k23p7xxfw85nzhd38f9fy49"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; + Scale4C = derive2 { name="Scale4C"; version="1.12.0"; sha256="0kk8nwd8png06g641cjlkbr5ykl7dn9drfyxdvhc1knbv48w2i42"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; }; + Sconify = derive2 { name="Sconify"; version="1.10.0"; sha256="0r5n7cyv483k17k9gv2vhfi14h6idnfx2y41rbnwvsplh05fc6mm"; depends=[dplyr flowCore FNN ggplot2 magrittr readr Rtsne tibble]; }; + SemDist = derive2 { name="SemDist"; version="1.24.0"; sha256="1kkicqqxmhsxzswxiqm8ccvvcly0rak5rxlfkc0b8rvgjc1p4zhp"; depends=[annotate AnnotationDbi GO_db]; }; + SeqArray = derive2 { name="SeqArray"; version="1.30.0"; sha256="0h7aaqy00rq9vxpz2sfkl416gx74p8qnanf6z5946f2ra4xl2c72"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + SeqGSEA = derive2 { name="SeqGSEA"; version="1.30.0"; sha256="06ws19ilw1z84cz742rry99m1dp85qhyar47yxf0dsslwnbb2yk0"; depends=[Biobase biomaRt doParallel]; }; + SeqGate = derive2 { name="SeqGate"; version="1.0.1"; sha256="17g1pgwk1whcp9dm96ccw5c1sfjx4rgrjbzhr01cw09hzjvxjm7q"; depends=[BiocManager GenomicRanges S4Vectors SummarizedExperiment]; }; + SeqSQC = derive2 { name="SeqSQC"; version="1.12.0"; sha256="1rxm0pw13jkpn33w36b2jyka0sp4mwjzg5hixxzsmw4pjpfxih7c"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; }; + SeqVarTools = derive2 { name="SeqVarTools"; version="1.28.1"; sha256="1mh0a9cnr3b7l06asf1g4a67zdi77fra7z231yw2qdaamxmnwsx6"; depends=[Biobase BiocGenerics data_table gdsfmt GenomicRanges GWASExactHW IRanges logistf Matrix S4Vectors SeqArray]; }; + SharedObject = derive2 { name="SharedObject"; version="1.4.0"; sha256="1sx7k7d1vs3sqxcqhzy4rxnb5ci71z7346a34y66p6lsryc30f1d"; depends=[BH BiocGenerics Rcpp]; }; + ShortRead = derive2 { name="ShortRead"; version="1.48.0"; sha256="0w4m8d3h660mmr2ymp206r1n4aqssxmkv8yxkbr5y1swrahxzfk9"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rhtslib Rsamtools S4Vectors XVector zlibbioc]; }; + SigCheck = derive2 { name="SigCheck"; version="2.22.0"; sha256="1fdh97k9lhwq7d852jjwg9p9gzhk72spxynyljzhcw369j9yqc7d"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; + SigFuge = derive2 { name="SigFuge"; version="1.28.0"; sha256="1nqhx0bfqk2vj8agkw6mkcxv2by6cx1l7hh8cx057dkflclj2wy2"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; + SigsPack = derive2 { name="SigsPack"; version="1.4.0"; sha256="00f5bhm7aj08zvjq19yyii9hsdlzcf9drndgry7gdqsw6m8538dv"; depends=[Biobase Biostrings BSgenome GenomeInfoDb GenomicRanges quadprog rtracklayer SummarizedExperiment VariantAnnotation]; }; + SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.28.0"; sha256="0hin5hzbbllkjxnnq04yi6n2m9dhgq9xg1bf2fm34j6sidhakca2"; depends=[Biobase limma mclust Ringo]; }; + SimFFPE = derive2 { name="SimFFPE"; version="1.2.0"; sha256="156472jp0kc78yh92id4894znisvndiiiibzm7vcxl7rd5fsmilg"; depends=[Biostrings doParallel dplyr foreach GenomicRanges IRanges Rsamtools truncnorm]; }; + SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.12.0"; sha256="0wpgb2rhxxlclpmwl08iyfy204f7gpj8ijd0qdy4j41c58bl4qm2"; depends=[BiocGenerics S4Vectors SummarizedExperiment]; }; + SingleCellSignalR = derive2 { name="SingleCellSignalR"; version="1.2.0"; sha256="04rh8n8qx1xlsahgrb3fkd0vj1cyqmy3zi33l7dsz3m20q05qw79"; depends=[BiocManager circlize data_table edgeR foreach gplots igraph limma multtest pheatmap Rtsne scran SIMLR stringr]; }; + SingleR = derive2 { name="SingleR"; version="1.4.1"; sha256="1zr4gz1pxpwmwhvzb7cvlxf4mxn9qzymrfv345gbk24dzz5ah4bg"; depends=[beachmat BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats Matrix Rcpp S4Vectors SummarizedExperiment]; }; + SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.26.0"; sha256="1pwf9ws0klcij27w22p0nh924yp5h2jsidp54ppp7mnx08iv0801"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; + SpacePAC = derive2 { name="SpacePAC"; version="1.28.0"; sha256="0q701dx12avisspplpij6qs77bwn12xq589c1b9p4kyipqfh02qn"; depends=[iPAC]; }; + Spaniel = derive2 { name="Spaniel"; version="1.4.0"; sha256="0w4i6yjwivzcjcbxi5nmdli02wqglnfd9kmmf39pkhnngcw238a1"; depends=[dplyr ggplot2 jpeg magrittr S4Vectors scater Seurat shiny SingleCellExperiment SummarizedExperiment]; }; + SparseSignatures = derive2 { name="SparseSignatures"; version="2.0.0"; sha256="1zlrm8wlvwpn7cqd0mr14dfhw1pqml4zzgg7z63vajk73ybly1yy"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF nnlasso nnls reshape2]; }; + SpatialCPie = derive2 { name="SpatialCPie"; version="1.6.0"; sha256="16gjr7csvxgs893zlf3vsxmyxgnyrcfsp2a4zxhg56mya8ix4j8h"; depends=[colorspace data_table digest dplyr ggforce ggiraph ggplot2 ggrepel igraph lpSolve purrr readr rlang shiny shinycssloaders shinyjs shinyWidgets SummarizedExperiment tibble tidyr tidyselect zeallot]; }; + SpatialDecon = derive2 { name="SpatialDecon"; version="1.0.0"; sha256="1lp1skfar6946r65aq7wmd086v9q2hm08ygkzq06s14kzcj35fxm"; depends=[logNormReg]; }; + SpatialExperiment = derive2 { name="SpatialExperiment"; version="1.0.0"; sha256="1qp8j56qa1hhdlipy3vkw9krairx0rz3v40asyyv1q38jy2lck6h"; depends=[S4Vectors SingleCellExperiment]; }; + SpeCond = derive2 { name="SpeCond"; version="1.44.0"; sha256="0hbvd0n9bcksgvqfzfj65ijhzr0jp6r5sc9rwavqrjd4g6fy7amj"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; + Spectra = derive2 { name="Spectra"; version="1.0.5"; sha256="1qgz9lm0nkcl7ki73ckfvhf181dsmpri0k6ps4r6l26ddqvxyjdc"; depends=[BiocParallel fs IRanges MsCoreUtils ProtGenerics S4Vectors]; }; + SpectralTAD = derive2 { name="SpectralTAD"; version="1.6.0"; sha256="1jmkg9zv0lz6dwsgjqxrz412anjpqhlk0rcsxx5899w0giijvzl1"; depends=[BiocParallel cluster dplyr GenomicRanges HiCcompare magrittr Matrix PRIMME]; }; + SpidermiR = derive2 { name="SpidermiR"; version="1.20.0"; sha256="17z6i3ncsyznwzq8ayfbfsbl6n2f6rf8d99gch5scjxmvr42czhh"; depends=[AnnotationDbi gdata ggplot2 gplots gridExtra httr igraph lattice latticeExtra MAGeCKFlute miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; + SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.30.0"; sha256="0z7b0i2qna792zcx82xas7hwhc4fnbs986148s2bd4iiszghig45"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; + StarBioTrek = derive2 { name="StarBioTrek"; version="1.16.0"; sha256="1rjnikkrah0avvc2wv8hlr6clgh7dqaxzsdzcc1bsif7fq22d46y"; depends=[AnnotationDbi e1071 ggplot2 graphite igraph MLmetrics reshape2 ROCR SpidermiR]; }; + Streamer = derive2 { name="Streamer"; version="1.36.0"; sha256="006rj51jrra6dscp3fh71f145ncays10zidqq4p2x39z786zzlrv"; depends=[BiocGenerics graph RBGL]; }; + Structstrings = derive2 { name="Structstrings"; version="1.6.1"; sha256="0x5s6m7im34sj59cy5xf6zdwswq42d3v71v4l2ik7qcl0c13fr0r"; depends=[BiocGenerics Biostrings crayon IRanges S4Vectors stringi stringr XVector]; }; + StructuralVariantAnnotation = derive2 { name="StructuralVariantAnnotation"; version="1.6.0"; sha256="0ff40703iyf5wk77hbqhphfxnzc2wcshnjhvh66c5l0jvj9z8xvc"; depends=[assertthat BiocGenerics Biostrings dplyr GenomicRanges rlang rtracklayer stringr VariantAnnotation]; }; + SubCellBarCode = derive2 { name="SubCellBarCode"; version="1.6.0"; sha256="0h4ndjwvxg93xi0ihcngg1ahbc22k5qg15sazjrb1qg0x5hz9kr6"; depends=[AnnotationDbi caret e1071 ggplot2 ggrepel gridExtra networkD3 org_Hs_eg_db Rtsne scatterplot3d]; }; + SummarizedBenchmark = derive2 { name="SummarizedBenchmark"; version="2.8.0"; sha256="1jqybq79kvlm1myywfsvp4kyg10ypqi9lhkghxi5hxvz86ii7pb2"; depends=[BiocGenerics BiocParallel crayon digest dplyr ggplot2 mclust rlang S4Vectors sessioninfo stringr SummarizedExperiment tibble tidyr UpSetR]; }; + SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.20.0"; sha256="04x6d4mcsnvz6glkmf6k2cv3fs8zk03i9rvv0ahpl793n8l411ps"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix MatrixGenerics S4Vectors]; }; + Sushi = derive2 { name="Sushi"; version="1.28.0"; sha256="0ksj4f9z14mjsv6ssg5dwhpldw4r7wpdsln2if5g486mm1c56r8p"; depends=[biomaRt zoo]; }; + SwathXtend = derive2 { name="SwathXtend"; version="2.12.0"; sha256="08zmks8nhzdf2xs1v2rdgdnlxk5izpjr0pf6nlnnqg1f9357x4py"; depends=[e1071 lattice openxlsx VennDiagram]; }; + SwimR = derive2 { name="SwimR"; version="1.28.0"; sha256="07z4hzwi622g25j4h7f1jl9110mlak9jyrllcwc7bq0j266f0x97"; depends=[gplots R2HTML signal]; }; + SynExtend = derive2 { name="SynExtend"; version="1.2.0"; sha256="16aanfn4gnkfa9vpgy8mh4xfxh7pq5vvvh258qk0xn7hr9qig219"; depends=[Biostrings DECIPHER igraph IRanges S4Vectors]; }; + SynMut = derive2 { name="SynMut"; version="1.6.0"; sha256="0a3xnsib179yf2pl49jb52dyl1rd9qdc6ymd1xvz5mz3jw3h62gp"; depends=[BiocGenerics Biostrings seqinr stringr]; }; + TADCompare = derive2 { name="TADCompare"; version="1.0.0"; sha256="1sl9yf6n7iwc5pskz05lychrvlcdbv2sw64sgcckdgip7vfymnk2"; depends=[cluster cowplot dplyr ggplot2 ggpubr HiCcompare magrittr Matrix PRIMME RColorBrewer reshape2 tidyr]; }; + TAPseq = derive2 { name="TAPseq"; version="1.2.0"; sha256="1v8whnfd1aiwlx1429n2afklfijp0vmvh245wmvjxcwbldd3awym"; depends=[BiocGenerics BiocParallel Biostrings BSgenome dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges S4Vectors tidyr]; }; + TBSignatureProfiler = derive2 { name="TBSignatureProfiler"; version="1.2.0"; sha256="02pcw4bwx0s4c5zvf0xydjg98ppq0lkz57nbqbhggp3p7cn4ngk4"; depends=[ASSIGN BiocParallel bioDist boot caret circlize ComplexHeatmap DESeq2 DT e1071 edgeR gdata ggfortify ggplot2 glmnet GSVA RColorBrewer readr reshape2 ROCit S4Vectors shiny singscore SummarizedExperiment]; }; + TCC = derive2 { name="TCC"; version="1.30.0"; sha256="0v7crvr9zirkbmvqh7nv8h2bgip99fx4h50hqfh9gbf6pwd3748c"; depends=[baySeq DESeq2 edgeR ROC]; }; + TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.18.0"; sha256="1w1n8dsci0yqawxl5xayr383g81ilrskqldd40q1q2pc6gj1vw13"; depends=[biomaRt data_table downloader dplyr GenomicRanges ggplot2 httr IRanges jsonlite knitr plyr purrr R_utils readr rvest S4Vectors stringr SummarizedExperiment TCGAbiolinksGUI_data tibble tidyr XML xml2]; }; + TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.16.0"; sha256="1dfc6inf4lbsdg68p56xqdsr9wmfkh04zjg8r9d8379ajm181axx"; depends=[caret clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr sesame shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks TCGAbiolinksGUI_data]; }; + TCGAutils = derive2 { name="TCGAutils"; version="1.10.1"; sha256="0n5wzxf2jxc4pyg5v5jcispb7id86cmc4dpdvcsq23s49wd194yw"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicDataCommons GenomicFeatures GenomicRanges IRanges MultiAssayExperiment RaggedExperiment rvest S4Vectors stringr SummarizedExperiment xml2]; }; + TCseq = derive2 { name="TCseq"; version="1.14.0"; sha256="1v6pi5zrnl3fbyfrmf32g93mjx6q3y6lm2w1pfll610hdcbkyibn"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; }; + TDARACNE = derive2 { name="TDARACNE"; version="1.40.0"; sha256="1lpxxss0j87ylzz0hwvx8ipmphb9ny5mgqpr3393r8bhx2x30niy"; depends=[Biobase GenKern Rgraphviz]; }; + TEQC = derive2 { name="TEQC"; version="4.12.0"; sha256="0fzcdwqr0kzxs4qplcp76mijfq1q7hj47dfxygs29jwigwxwlq8q"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; + TFARM = derive2 { name="TFARM"; version="1.12.0"; sha256="0wx1kdq2xfgd5sxs1jq964c7n3kd33yzm8b2pjic8kawc7i6y00d"; depends=[arules fields GenomicRanges gplots stringr]; }; + TFBSTools = derive2 { name="TFBSTools"; version="1.28.0"; sha256="0p42hnwhipmcvrsqk3s8qfiian1fvh6izfd9m961bsx99r2clnha"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; + TFEA_ChIP = derive2 { name="TFEA.ChIP"; version="1.10.0"; sha256="1ln3c323gq90rq68nh42nlrj834gxv5rcv1mdl9r2mnlpiwj3npc"; depends=[biomaRt dplyr GenomicFeatures GenomicRanges IRanges org_Hs_eg_db R_utils]; }; + TFHAZ = derive2 { name="TFHAZ"; version="1.12.0"; sha256="13h13b8k8hgfacfhwvf7q20mzdz9vp4v3jkz3m0c67s8c4k9nz2x"; depends=[GenomicRanges IRanges S4Vectors]; }; + TFutils = derive2 { name="TFutils"; version="1.10.1"; sha256="04bmm82yllrqnc01k7s6a4m2bdjrddvvz9r9w5x12fnznlmj6jw4"; depends=[BiocFileCache dplyr DT GSEABase httr magrittr miniUI readxl rjson Rsamtools shiny]; }; + TIN = derive2 { name="TIN"; version="1.22.0"; sha256="0sf0824crbzksr3cky09kvyiffsvv2arinw09pvhfj2qli6rsfda"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; + TMixClust = derive2 { name="TMixClust"; version="1.12.0"; sha256="0rajcylmpc360fy15xxw2820jcnmj8vsi0ca652d6ja9sn5ymy90"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; }; + TNBC_CMS = derive2 { name="TNBC.CMS"; version="1.6.0"; sha256="18vnrwr0fgavx5rv24l13jyqqlyv50w7qvkvajq12lbmcx7vrwrc"; depends=[e1071 forestplot GGally ggplot2 ggpubr GSVA pheatmap pracma quadprog R_utils RColorBrewer SummarizedExperiment survival]; }; + TOAST = derive2 { name="TOAST"; version="1.4.0"; sha256="1pgjkfy3x3k1v476113cq0ajlv8ani0jyh6mdng6vdmg860sxlax"; depends=[corpcor EpiDISH limma nnls RefFreeEWAS SummarizedExperiment]; }; + TPP = derive2 { name="TPP"; version="3.18.0"; sha256="0mgfb2x0k00h50iqcjjglmxfs5jpl7d527g2pp9fmc0vh9zlm7ac"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown stringr tibble tidyr VennDiagram VGAM]; }; + TPP2D = derive2 { name="TPP2D"; version="1.6.0"; sha256="1qzwxfk2b1mp24yqp9mg5mrj176rbhyvb2s6vq38bxh0ymfprhl9"; depends=[BiocParallel doParallel dplyr foreach ggplot2 limma MASS openxlsx RCurl stringr tidyr]; }; + TRONCO = derive2 { name="TRONCO"; version="2.22.0"; sha256="0i9zvmlp7v4fyh2hp3ydviharw3mxcs4sllp4m1r9glfa3hvdlf2"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; + TSCAN = derive2 { name="TSCAN"; version="1.28.0"; sha256="0cxyf34prx02rlh05wyvbvwwm8m73glnshf1b3a9g0rzn8wv4kks"; depends=[combinat DelayedArray fastICA ggplot2 gplots igraph Matrix mclust mgcv plyr S4Vectors shiny SingleCellExperiment SummarizedExperiment]; }; + TSRchitect = derive2 { name="TSRchitect"; version="1.16.0"; sha256="1s09isqaph4i60hazc0b1irf9q8x3v2640zwc4gpdn3qlind7gra"; depends=[AnnotationHub BiocGenerics BiocParallel dplyr GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges readxl Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + TTMap = derive2 { name="TTMap"; version="1.12.0"; sha256="1dncj4qcl9qqczg79644rq2mw5z2a2xvzbyjizlimanw5abxjsy6"; depends=[Biobase colorRamps rgl SummarizedExperiment]; }; + TVTB = derive2 { name="TVTB"; version="1.16.0"; sha256="0234axp2abbb3l5q62cbzvnrsp1i06x56z20ram6x8kg9kwpihwn"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; }; + TarSeqQC = derive2 { name="TarSeqQC"; version="1.20.0"; sha256="1v24bswfx4mklz4xzlp3d2lkrq25fkj4qfg6g0da3i02ab77pq8b"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; + TargetScore = derive2 { name="TargetScore"; version="1.28.0"; sha256="14sa8hs9jics20pbksh1kk0r553ljz5x1ygap6c8gcqx9rmwi56j"; depends=[Matrix pracma]; }; + TargetSearch = derive2 { name="TargetSearch"; version="1.46.3"; sha256="01qg7a8c8hrh41pgq5rwww5dik2191spm24s9w28xsjvp0vrqs7d"; depends=[assertthat ncdf4]; }; + TileDBArray = derive2 { name="TileDBArray"; version="1.0.0"; sha256="0rlzi2dh91nkr5rks22dkpcp8kv7kra25hlf4gkg6brzvjgnqrh8"; depends=[DelayedArray Rcpp S4Vectors tiledb]; }; + TimeSeriesExperiment = derive2 { name="TimeSeriesExperiment"; version="1.8.0"; sha256="1jx0rk660mfzk7rfhamnp0disx3bv456cqi9hyaz2wcbcdrlvcjn"; depends=[DESeq2 dplyr dynamicTreeCut edgeR ggplot2 Hmisc limma magrittr proxy S4Vectors SummarizedExperiment tibble tidyr vegan viridis]; }; + TimiRGeN = derive2 { name="TimiRGeN"; version="1.0.6"; sha256="0id1c7z37zxrp1i4xamlys63vh1wzya1dyi7lxigcggrsvvfyyi6"; depends=[biomaRt clusterProfiler dplyr FreqProf ggdendro gghighlight ggplot2 gplots gtools igraph Mfuzz MultiAssayExperiment RCy3 readxl reshape2 rWikiPathways scales stringr tidyr]; }; + TissueEnrich = derive2 { name="TissueEnrich"; version="1.10.1"; sha256="1jgyhfv2qwlk7kvpp8nr1bpsadbqa88kkpdh9y96n46a276bxxzv"; depends=[dplyr ensurer ggplot2 GSEABase SummarizedExperiment tidyr]; }; + TitanCNA = derive2 { name="TitanCNA"; version="1.28.0"; sha256="1fpqxl3y4cz23qs10m900dvi3zyy6h7dp08rhhxgf13znjvbn6br"; depends=[BiocGenerics data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges VariantAnnotation]; }; + TnT = derive2 { name="TnT"; version="1.12.0"; sha256="115gkmxlidhpqv97vli3bf25jq2s68lsv3zmzjrd50dfq4npchkn"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; }; + ToPASeq = derive2 { name="ToPASeq"; version="1.24.0"; sha256="1viv56hzhrgl4w14ysdd3av8xknqsg2wrlcpxr4v9maaragn7z8g"; depends=[Biobase corpcor graph graphite gRbase limma RBGL Rcpp SummarizedExperiment]; }; + ToxicoGx = derive2 { name="ToxicoGx"; version="1.0.1"; sha256="0ysmkwrpdv9swnfm9np9kv7haqv22fgi9s5nfar6c52bxcwxaj1s"; depends=[assertthat Biobase BiocParallel caTools CoreGx data_table downloader dplyr ggplot2 limma magrittr reshape2 S4Vectors scales SummarizedExperiment tibble tidyr]; }; + TransView = derive2 { name="TransView"; version="1.34.0"; sha256="1kwcgrw3x5kz8sk2mybl6ps9z7mnl14din43xj7g1c55yy5rl1pm"; depends=[BiocGenerics GenomicRanges gplots IRanges Rhtslib S4Vectors zlibbioc]; }; + TreeAndLeaf = derive2 { name="TreeAndLeaf"; version="1.2.0"; sha256="1jjc3jb6vmd40syr64bwd3rbs0kn3l2n1vdy9sk0liypv7rzc52n"; depends=[ape igraph RedeR]; }; + TreeSummarizedExperiment = derive2 { name="TreeSummarizedExperiment"; version="1.6.2"; sha256="0n784s2yflljx0rwmb90cqqj9dwjjgca34hrhjnrijidgiy6gfik"; depends=[ape BiocGenerics dplyr rlang S4Vectors SingleCellExperiment SummarizedExperiment]; }; + Trendy = derive2 { name="Trendy"; version="1.12.0"; sha256="0pyhc4sblxybc6lj58iwl5zcg9scwsrcily8ky32n53j5flgmi7n"; depends=[BiocParallel DT gplots magrittr S4Vectors segmented shiny shinyFiles SummarizedExperiment]; }; + TurboNorm = derive2 { name="TurboNorm"; version="1.38.0"; sha256="02mbm2cmpjy9w8sdnw6f2jbrhccfqa8r4d27jcspilccsqmh58a0"; depends=[affy convert lattice limma marray]; }; + TxRegInfra = derive2 { name="TxRegInfra"; version="1.10.0"; sha256="1qrzm3kqijvig96m1bcndy0hm0ph4cn7p4vhbjqrl8sqyrzazryd"; depends=[BiocParallel GenomeInfoDb GenomicRanges IRanges mongolite RaggedExperiment rjson S4Vectors SummarizedExperiment]; }; + TypeInfo = derive2 { name="TypeInfo"; version="1.56.0"; sha256="03npdqh3ls8j16yi5vba9bqwhxwv6v88pzl1slfra9jkv02nb262"; depends=[]; }; + UMI4Cats = derive2 { name="UMI4Cats"; version="1.0.1"; sha256="0qsmraxxpd3x4imm3pdpm3rlwqkybpnh2kdpmpfk0vp4nli9n5pl"; depends=[annotate BiocFileCache Biostrings BSgenome cowplot DESeq2 dplyr fda GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges magick magrittr org_Hs_eg_db R_utils rappdirs Rbowtie2 RColorBrewer regioneR reshape2 rlang Rsamtools S4Vectors scales ShortRead stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene zoo]; }; + UNDO = derive2 { name="UNDO"; version="1.32.0"; sha256="0ybpz8xrymlf3hv17aigvaxhijwgvhikpzh2bbvcnvqxcc6fhc78"; depends=[Biobase BiocGenerics boot MASS nnls]; }; + Ularcirc = derive2 { name="Ularcirc"; version="1.8.0"; sha256="132my2aacrfm2pv3gh3ny421rx7rnpfnr9mnh6y32y7j1i63qv8f"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings BSgenome data_table DT GenomeInfoDb GenomeInfoDbData GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel gsubfn mirbase_db moments Organism_dplyr S4Vectors shiny shinydashboard shinyFiles shinyjs Sushi yaml]; }; + UniProt_ws = derive2 { name="UniProt.ws"; version="2.30.0"; sha256="043biy3ycqbjgf75sldky3nagayqzin3v5c0cbpp4bm52ydlxmg9"; depends=[AnnotationDbi BiocFileCache BiocGenerics rappdirs RCurl RSQLite]; }; + Uniquorn = derive2 { name="Uniquorn"; version="2.10.0"; sha256="1j8fx3jdac314wyzxz22biwl0hw4mi6flcmswwgd0ylw3kh9spzb"; depends=[doParallel foreach GenomicRanges IRanges R_utils stringr VariantAnnotation WriteXLS]; }; + VCFArray = derive2 { name="VCFArray"; version="1.6.0"; sha256="14y80fg7sgbcw09z5n9lj8p6dprs26dn2cvdfkzdrv14ilbw49ia"; depends=[BiocGenerics DelayedArray GenomicFiles GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; + VERSO = derive2 { name="VERSO"; version="1.0.0"; sha256="02xklj9xs978hjiwjb0cbs8fil694i7rb5gx2rqnchb0n1c24axp"; depends=[ape Rfast]; }; + VaSP = derive2 { name="VaSP"; version="1.2.5"; sha256="1bbsg9l0j5gqgf1gglky0zg3v26s6hfy49fabijqyj57sqfwda89"; depends=[ballgown cluster GenomeInfoDb GenomicAlignments GenomicRanges IRanges matrixStats Rsamtools S4Vectors Sushi]; }; + VanillaICE = derive2 { name="VanillaICE"; version="1.52.0"; sha256="08xyffbm11742ghgkps5pz43js49jl9k4mj0x2g4sjfqfaajf8s6"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice MatrixGenerics matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; + VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.36.0"; sha256="1sl0l6v05lfglj281nszma0h5k234md7rn2pdah8vs2d4iq3kimw"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges MatrixGenerics Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; + VariantExperiment = derive2 { name="VariantExperiment"; version="1.4.2"; sha256="0sac20wzj8clva2ynqv519ycgk9aq2gbyi5hv8jpzg99a5v9ji41"; depends=[Biostrings DelayedArray DelayedDataFrame GDSArray gdsfmt GenomicRanges IRanges S4Vectors SeqArray SeqVarTools SNPRelate SummarizedExperiment]; }; + VariantFiltering = derive2 { name="VariantFiltering"; version="1.26.0"; sha256="0zy53knvyk8wy3hmnsxc0w9qkhvx6xhviskvx7rwmrsi7pz531l5"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny shinyjs shinythemes shinyTree SummarizedExperiment VariantAnnotation XVector]; }; + VariantTools = derive2 { name="VariantTools"; version="1.32.0"; sha256="1im4g9p419mikkh4v585yf5f23d13chy67znk4g2mii2i1cd1c89"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + VegaMC = derive2 { name="VegaMC"; version="3.28.0"; sha256="19fhm5xiw4g5713zfxd7r38xnjwps2zld57iq2rb2icahs2hlxjv"; depends=[Biobase biomaRt genoset]; }; + VennDetail = derive2 { name="VennDetail"; version="1.6.0"; sha256="0z5ab7d5gmgnl37nwdqcqhy1dwh4wh7z0cgx0kfhm14nb86p48hz"; depends=[dplyr futile_logger ggplot2 magrittr purrr tibble UpSetR VennDiagram]; }; + ViSEAGO = derive2 { name="ViSEAGO"; version="1.4.0"; sha256="0m1z42zajq33nvnyclimk5v48yyd89v8cghdy4l66xgnjhkkrc29"; depends=[AnnotationDbi AnnotationForge biomaRt data_table dendextend DiagrammeR DT dynamicTreeCut fgsea ggplot2 GO_db GOSemSim heatmaply htmlwidgets igraph plotly processx R_utils RColorBrewer scales topGO UpSetR]; }; + VplotR = derive2 { name="VplotR"; version="1.0.0"; sha256="0f3lgwhm2shpf1w99nwcxn7h2j6ghjvjkwsbnn58bs946kc4cbmi"; depends=[cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr RColorBrewer reshape2 Rsamtools S4Vectors zoo]; }; + Wrench = derive2 { name="Wrench"; version="1.8.0"; sha256="01z7rd9fn6cpab3dxgwfpfjlq6vsqb8jhbzvhcqn9v2vqc2pridx"; depends=[limma locfit matrixStats]; }; + XBSeq = derive2 { name="XBSeq"; version="1.22.0"; sha256="1dvk2jpsdynqw5071z54yd5j0ddprhc1ppk834cz9liibd72d7vz"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; + XCIR = derive2 { name="XCIR"; version="1.4.0"; sha256="0c9nfc9z398sqfwzn911jh036jkx2slwyp61wn4lbffz27a8szkp"; depends=[biomaRt data_table ggplot2 IRanges readxl S4Vectors seqminer VariantAnnotation]; }; + XDE = derive2 { name="XDE"; version="2.36.0"; sha256="1705lq97w9brwd5ilc5gr1frgh5438pxd767n770cdxkz69xlqjb"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools mvtnorm RColorBrewer siggenes]; }; + XINA = derive2 { name="XINA"; version="1.8.0"; sha256="0z12wrbxxs0kxqy3mwkmxr7kjkmbpxjnai2x46hswfvwaxrds10a"; depends=[alluvial ggplot2 gridExtra igraph mclust plyr STRINGdb]; }; + XVector = derive2 { name="XVector"; version="0.30.0"; sha256="1pqljikg4f6jb7wgm5537zwgq5b013nyz1agjrwfq2cljb0ym6lq"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; + Xeva = derive2 { name="Xeva"; version="1.6.0"; sha256="0ijgmgvv7348h2x773yfrrmnxl6lfc62n52pq33zykdcn0jgbxbs"; depends=[BBmisc Biobase ComplexHeatmap doParallel downloader ggplot2 nlme PharmacoGx Rmisc scales]; }; + YAPSA = derive2 { name="YAPSA"; version="1.16.0"; sha256="1vwccrp01p8i42axbaz1bqq173la18ldrzmrjawr5nkjjkvddbpb"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 circlize ComplexHeatmap corrplot dendextend doParallel dplyr GenomeInfoDb GenomicRanges GetoptLong ggbeeswarm ggplot2 gridExtra gtrellis KEGGREST limSolve magrittr PMCMR pracma reshape2 SomaticSignatures VariantAnnotation]; }; + a4 = derive2 { name="a4"; version="1.38.0"; sha256="12q09dhxjl7yrd5m2y7a03kv5614dp144ajmskp5q9x2gvz30f79"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; + a4Base = derive2 { name="a4Base"; version="1.38.0"; sha256="0bqagjmg3yjmdzxv4j7685jjhgb261pq60b5qkfffr1lfnz27lsp"; depends=[a4Core a4Preproc annaffy Biobase genefilter glmnet gplots limma mpm multtest]; }; + a4Classif = derive2 { name="a4Classif"; version="1.38.0"; sha256="03fln0x1am5fqhj4fpkx1yq58paqha086bhhr8az8j0vsq1r7wcz"; depends=[a4Core a4Preproc Biobase glmnet pamr ROCR varSelRF]; }; + a4Core = derive2 { name="a4Core"; version="1.38.0"; sha256="13mzhn92kqpbn58zmh96f6frkm85sv9137mldfzaljf6snk0spg2"; depends=[Biobase glmnet]; }; + a4Preproc = derive2 { name="a4Preproc"; version="1.38.0"; sha256="1j8jhal83x1xpmsaw8iwv2r32i1ghzm6n0ipjk06yqa9f6zb7f7i"; depends=[Biobase BiocGenerics]; }; + a4Reporting = derive2 { name="a4Reporting"; version="1.38.0"; sha256="1jx4ym3hyix8gwr8d2r38w1wj7siv6ynzhwanczcjf1naws3dqpy"; depends=[xtable]; }; + aCGH = derive2 { name="aCGH"; version="1.68.0"; sha256="17i8p3nlfr1vc33lq5xd93qjkzinahldl87bnahvhadzgmc9xkrk"; depends=[Biobase cluster multtest survival]; }; + abseqR = derive2 { name="abseqR"; version="1.8.0"; sha256="0lh7kcsp3yb3s8s8j6w9k1by8i16q7r2a49z8y1xjmkcb2klsi3f"; depends=[BiocParallel BiocStyle circlize flexdashboard ggcorrplot ggdendro ggplot2 gridExtra knitr plotly plyr png RColorBrewer reshape2 rmarkdown stringr vegan VennDiagram]; }; + acde = derive2 { name="acde"; version="1.20.0"; sha256="0iixhcxgf2dwwmxqd78cnlyx2f8gql2a49hw2c1j86k65lvj4rhq"; depends=[boot]; }; + adSplit = derive2 { name="adSplit"; version="1.60.0"; sha256="1dqxcbwylr8g1sl0pbca7vkgz85la8s4lrxss1pv9y9spyjccz49"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; }; + adductomicsR = derive2 { name="adductomicsR"; version="1.6.0"; sha256="02rwda9w5rkv6fvba932nwv1gd6vil6qpbny38dhlazinpr7hyzl"; depends=[adductData ade4 AnnotationHub bootstrap data_table doSNOW dplyr DT ExperimentHub fastcluster foreach fpc mzR OrgMassSpecR pastecs pracma RcppEigen reshape2 rvest smoother zoo]; }; + affxparser = derive2 { name="affxparser"; version="1.62.0"; sha256="13h4iwskvgwgxid9f60gzb1zndgbhdlbn9ixv5waihy1jkcbn24p"; depends=[]; }; + affy = derive2 { name="affy"; version="1.68.0"; sha256="0ywz548cbzk2k1njnxhlk5ydzvz2dk78ka8kx53gwrmdc4sc2b06"; depends=[affyio Biobase BiocGenerics BiocManager preprocessCore zlibbioc]; }; + affyContam = derive2 { name="affyContam"; version="1.48.0"; sha256="0pi5fll5868sb80vb9kbymz6gkjv58f0abk6zwn407cnyjhr342b"; depends=[affy affydata Biobase]; }; + affyILM = derive2 { name="affyILM"; version="1.42.0"; sha256="0qaag3svfz925p7p9byiblsxdvs1k2a4ipjvv5pwnf6fk94kn6gf"; depends=[affxparser affy Biobase gcrma]; }; + affyPLM = derive2 { name="affyPLM"; version="1.66.0"; sha256="0bkmyd5pkvgjgwppsyh9bwxx8nld93ijzic47lsjgy7gl1cniyg7"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; + affyPara = derive2 { name="affyPara"; version="1.50.0"; sha256="058s7vy6klkppzaymin1q5n6kw33ayl5n00q3pdr2is8ahmhq103"; depends=[affy affyio aplpack snow vsn]; }; + affyQCReport = derive2 { name="affyQCReport"; version="1.68.0"; sha256="073j54dw3ag0lgmkj1gp3lifl79inq2d95bg6jgsblwcfx26vb2m"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; }; + affycomp = derive2 { name="affycomp"; version="1.66.0"; sha256="106gz4rami04r0ffc7rxkrv92s3yrcnlqnyykd5s8lrkndbihrpk"; depends=[Biobase]; }; + affycoretools = derive2 { name="affycoretools"; version="1.62.0"; sha256="0jacgwylg7wjw3xk3ga2sb1wkdklm5glamhbmqgvzm5kdjnl0rv0"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 Glimma GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; }; + affyio = derive2 { name="affyio"; version="1.60.0"; sha256="14xnzrxrvgxgixjhq5a9fdgcmrxam2j74hwidkc9if92ffv6s83h"; depends=[zlibbioc]; }; + affylmGUI = derive2 { name="affylmGUI"; version="1.64.0"; sha256="1xc28s49w02k45ks8zhj7i28lcwdy4ihpgb9l4npzr1pblzg594j"; depends=[affy affyio affyPLM AnnotationDbi BiocGenerics BiocManager gcrma limma R2HTML tkrplot xtable]; }; + aggregateBioVar = derive2 { name="aggregateBioVar"; version="1.0.0"; sha256="1ggdpsw0prrg05n6sd5qrpfghlkzh27qdwr4wd3qmb990xz70j2x"; depends=[Matrix rlang S4Vectors SingleCellExperiment SummarizedExperiment tibble]; }; + agilp = derive2 { name="agilp"; version="3.22.0"; sha256="0g6i5m9dd8s8gv75fpcqngrsgkx0i9777v63fgp588430bm51n8z"; depends=[]; }; + alevinQC = derive2 { name="alevinQC"; version="1.6.1"; sha256="1gb7251fxhiyl2wljdydpc44iknhw8bb0k4gjzsrccnr1s3yyk5v"; depends=[cowplot dplyr DT GGally ggplot2 rjson rlang rmarkdown shiny shinydashboard tximport]; }; + alpine = derive2 { name="alpine"; version="1.16.0"; sha256="0wrnmmz878bchdwfss82z8fgzcsjbx8cpamfpdpzmx4bagp7yzp8"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; }; + alsace = derive2 { name="alsace"; version="1.26.0"; sha256="1jp8w71hvzvb8w0sx0n1v4bhw335bvqbicmrpn91sb85fvbrknzv"; depends=[ALS ptw]; }; + altcdfenvs = derive2 { name="altcdfenvs"; version="2.52.0"; sha256="1fmr8rpnr7xxr7kj0q36ypnydasacpwddxbrwhxix6xcy777f3k6"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; }; + amplican = derive2 { name="amplican"; version="1.12.0"; sha256="113abz4jyqx0zmfj1dpx9c7jpcgmvdwvrf7j9ihs0q57xw3s0l8k"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats Rcpp rmarkdown S4Vectors ShortRead stringr waffle]; }; + animalcules = derive2 { name="animalcules"; version="1.6.0"; sha256="1hpahzlh122y92ljg5fy42y4j744nj394b9gdwzwkzf4mpn0xbl2"; depends=[ape assertthat biomformat caret covr DESeq2 dplyr DT forcats ggplot2 glmnet lattice limma magrittr Matrix MultiAssayExperiment plotly plotROC reactable rentrez reshape2 S4Vectors scales shiny shinyjs SummarizedExperiment tibble tsne umap vegan XML]; }; + annaffy = derive2 { name="annaffy"; version="1.62.0"; sha256="1szlr33lq98pd3kx6n9l07lhr93swbk6vjpvb2n9f7716k39mi4i"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; }; + annmap = derive2 { name="annmap"; version="1.32.0"; sha256="189gkq3rdazh1fbri4x7gbsbw572m2rc74qh49pps0la3qj90a9g"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; + annotate = derive2 { name="annotate"; version="1.68.0"; sha256="1rql591x56532m8n4axdkfkhkbcsz5hfrf7271s0lmkvy84i7z6l"; depends=[AnnotationDbi Biobase BiocGenerics DBI httr XML xtable]; }; + annotationTools = derive2 { name="annotationTools"; version="1.64.0"; sha256="1q3c30hqxjgar3gm8d7h4rw3m7cgc11cgv9q0fwv5abj075cj224"; depends=[Biobase]; }; + annotatr = derive2 { name="annotatr"; version="1.16.0"; sha256="0dq67snpqxl9mifljm6zlnkdb0ghjwday0fvcn3i7zmrfszgzyf9"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges readr regioneR reshape2 rtracklayer S4Vectors]; }; + anota = derive2 { name="anota"; version="1.38.0"; sha256="02s061q6dfw1czppqiklb0fz6q0mjyqgxg6926b2dpqpz8hv690x"; depends=[multtest qvalue]; }; + anota2seq = derive2 { name="anota2seq"; version="1.12.0"; sha256="1xajfkdrqhzdxh4nabyvb43zfms8kpxyj1sp3zhgs1jk1lvgx129"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; + antiProfiles = derive2 { name="antiProfiles"; version="1.30.0"; sha256="138pvbk7011i2pfi0p362pxa7bxd4456rqn2cy9d7889y7kcdyk9"; depends=[locfit matrixStats]; }; + apComplex = derive2 { name="apComplex"; version="2.56.0"; sha256="0mafxf2hwihskzx7b3mwz0dymsdlwf065hl7g2186d1nl8f4hs5q"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; + apeglm = derive2 { name="apeglm"; version="1.12.0"; sha256="0pix1fhxk2q89p2745fgsmxwics9rf10l392qhw3rw6v6ynhims2"; depends=[emdbook GenomicRanges Rcpp RcppEigen RcppNumerical SummarizedExperiment]; }; + appreci8R = derive2 { name="appreci8R"; version="1.8.0"; sha256="103z393i4my1ccnl9qnr0dhklly19qhwj7jmbjslnbvbxrxcaaf5"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 COSMIC_67 DT GenomicFeatures GenomicRanges GenomicScores Homo_sapiens IRanges MafDb_1Kgenomes_phase3_hs37d5 MafDb_ExAC_r1_0_hs37d5 MafDb_gnomADex_r2_1_hs37d5 openxlsx PolyPhen_Hsapiens_dbSNP131 rentrez Rsamtools rsnps S4Vectors seqinr shiny shinyjs SIFT_Hsapiens_dbSNP137 SNPlocs_Hsapiens_dbSNP144_GRCh37 stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation XtraSNPlocs_Hsapiens_dbSNP144_GRCh37]; }; + aroma_light = derive2 { name="aroma.light"; version="3.20.0"; sha256="0pi37rlfqh24p9wd7l1xb3f7c7938xdscgcc5agp8c9qhajq25a0"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; + arrayMvout = derive2 { name="arrayMvout"; version="1.48.0"; sha256="14k7v4cmyj9drd4xy51wwapwy4yi9v490m63ahyiyr0cj93lm6vk"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; }; + arrayQuality = derive2 { name="arrayQuality"; version="1.68.0"; sha256="1qdl0a1qsc94509yr17a4rfsxqffy01gp18hfgh9zrdpzd1mlvm7"; depends=[gridBase hexbin limma marray RColorBrewer]; }; + arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.46.0"; sha256="1yrms160c3daswxi1k6chzvs6dagb74aqqqb4c6n4w6a02arsxc2"; depends=[affy affyPLM beadarray Biobase genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG svglite vsn XML]; }; + artMS = derive2 { name="artMS"; version="1.8.3"; sha256="0h0fhgh564w89pkmdm5pwbh7mv83pirc4smhhl32az6m7x77b8yz"; depends=[AnnotationDbi biomaRt bit64 circlize cluster ComplexHeatmap corrplot data_table dplyr factoextra FactoMineR getopt ggdendro ggplot2 ggrepel gplots gProfileR limma MSstats openxlsx org_Hs_eg_db org_Mm_eg_db PerformanceAnalytics pheatmap plotly plyr RColorBrewer scales seqinr stringr tidyr UpSetR VennDiagram yaml]; }; + atSNP = derive2 { name="atSNP"; version="1.6.1"; sha256="0gjvq9y03ix0nlj1fkj9qx8yr5qq9qigaldimizcr8mhavixwhzh"; depends=[BiocFileCache BiocParallel BSgenome data_table ggplot2 lifecycle motifStack rappdirs Rcpp testthat]; }; + attract = derive2 { name="attract"; version="1.42.0"; sha256="111m2hkqglw7f61pj5ih04wxlmr9a333c1s40ll0yx3yds4iqh24"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; }; + bacon = derive2 { name="bacon"; version="1.18.0"; sha256="0cv4zhs075mz8c5gdwhr45v14fb1lyi3rlwjfqyz15dmmnzlxw47"; depends=[BiocParallel ellipse ggplot2]; }; + ballgown = derive2 { name="ballgown"; version="2.22.0"; sha256="06kfaf7kba84qb646b4w4z7jyh7g9wf4jkgr3syn1zq6np6f0p57"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; + bambu = derive2 { name="bambu"; version="1.0.3"; sha256="025c22p29zb9asm42p53wyicdjv2k3k7ifiakkq65cxirc1w9q0j"; depends=[BiocGenerics BiocParallel data_table dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges glmnet IRanges Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment]; }; + bamsignals = derive2 { name="bamsignals"; version="1.22.0"; sha256="0p3r9z9z5sfkd0b951cgr751k4z0yviyn1jfw9d4fcnyld7g1jxv"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; + banocc = derive2 { name="banocc"; version="1.14.0"; sha256="12vh32hzgzdrkmm2afx81vwq35cv5l6lw31jzmf0vvyrrallj2g3"; depends=[coda mvtnorm rstan stringr]; }; + basecallQC = derive2 { name="basecallQC"; version="1.14.0"; sha256="18sjx2qkx3kpinsz63fv3xzgqcn9jd0imyn3akdriskky90caagc"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; }; + basilisk = derive2 { name="basilisk"; version="1.2.1"; sha256="1bwjs4v4va9dbp9y4p5f9p73d7207a3infl7ms1ppy3n984qrjk7"; depends=[basilisk_utils filelock reticulate]; }; + basilisk_utils = derive2 { name="basilisk.utils"; version="1.2.2"; sha256="1hvv6a05mvkgqw13nbnkmksw86jmq8kix7wacr8x6q64iva14qcq"; depends=[filelock rappdirs]; }; + batchelor = derive2 { name="batchelor"; version="1.6.3"; sha256="1vxmhq6a1yczdc5zx0b4k6rp286mzpch7g6nkf9bgiqpxsx8zswn"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats igraph Matrix Rcpp ResidualMatrix S4Vectors scuttle SingleCellExperiment SummarizedExperiment]; }; + bayNorm = derive2 { name="bayNorm"; version="1.8.0"; sha256="0shrwd7fvbpqi27d8yn0ka3qq6qvyh0yc3xsrg4554pf80nlkkj3"; depends=[BB BiocParallel doSNOW fitdistrplus foreach iterators locfit MASS Matrix Rcpp RcppArmadillo RcppProgress SingleCellExperiment SummarizedExperiment]; }; + baySeq = derive2 { name="baySeq"; version="2.24.0"; sha256="1496inlw0x4mfy3g2v7j9ips96sf7576ydnfn6hvn2m6rz2ls215"; depends=[abind edgeR GenomicRanges]; }; + bcSeq = derive2 { name="bcSeq"; version="1.12.0"; sha256="1ivmcd24gzc0zvp2353ynil846f1b8qmwsypknfycvmsc3xfx65s"; depends=[Biostrings Matrix Rcpp]; }; + beachmat = derive2 { name="beachmat"; version="2.6.4"; sha256="0vbqdkc52j2v1ghygmhy2cbgqm4l99vmv8930wkzkq1pm73pmjji"; depends=[BiocGenerics DelayedArray Matrix]; }; + beadarray = derive2 { name="beadarray"; version="2.40.0"; sha256="178x7p4mn7jy8kvfvm6gwa3svxl7c813xw1xbrkxwnxbk8g0n1x7"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 hexbin illuminaio IRanges limma reshape2]; }; + beadarraySNP = derive2 { name="beadarraySNP"; version="1.56.0"; sha256="00cm4464fw7ppzlni392ld6vqww80ji6zqychqhm8zxdw73f7y4w"; depends=[Biobase quantsmooth]; }; + bgx = derive2 { name="bgx"; version="1.56.0"; sha256="0gm4wv9drqvg9r4f0id1ivrfgv0nvh0hb6hp63b3jd14092777im"; depends=[affy Biobase gcrma Rcpp]; }; + bigPint = derive2 { name="bigPint"; version="1.6.0"; sha256="1axgapy4iyx059777m9faczwwj03h3i5dyrs0rlc84axzhzd2kis"; depends=[DelayedArray dplyr GGally ggplot2 gridExtra hexbin Hmisc htmlwidgets plotly plyr RColorBrewer reshape shiny shinycssloaders shinydashboard stringr SummarizedExperiment tidyr]; }; + bigmelon = derive2 { name="bigmelon"; version="1.16.0"; sha256="0hj5njwx7n681vigkq4560f9dm7mdjgvcwbgp5nbdn1fb2z24bk7"; depends=[Biobase BiocGenerics gdsfmt GEOquery methylumi minfi wateRmelon]; }; + bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.38.0"; sha256="1k31h746j8r3f92vj62s38fw12qjkv5814ipcqfbswnxgaan17zj"; depends=[bigmemory]; }; + bioCancer = derive2 { name="bioCancer"; version="1.18.0"; sha256="0k13hh46b5rbhsnw3aaym2gpdj04xa9pw2g1c6sjxpskkyhw07ls"; depends=[AlgDesign AnnotationFuncs Biobase cgdsr clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier htmlwidgets org_Hs_eg_db plyr r_import radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; }; + bioDist = derive2 { name="bioDist"; version="1.62.0"; sha256="10p4iajpyqgqb35743jm1a33lwbsmax2g4vz9fbbhn2cpiq3chap"; depends=[Biobase KernSmooth]; }; + bioassayR = derive2 { name="bioassayR"; version="1.28.3"; sha256="03pdb76j7c28b1h1flb40ahq7i9iha22kblq6mkl3x4xmrdgaw5y"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; + biobroom = derive2 { name="biobroom"; version="1.22.0"; sha256="07wzamwl07p20s932aym2jkf6c1zz7d9h7kyby5ka4pw4abynlrv"; depends=[Biobase broom dplyr tidyr]; }; + biobtreeR = derive2 { name="biobtreeR"; version="1.2.0"; sha256="0v8hfzyyrj9k495b58lg769748vvv03ja6g2lrabz7w64r2ng679"; depends=[httpuv httr jsonlite stringi]; }; + biocGraph = derive2 { name="biocGraph"; version="1.52.0"; sha256="02y7vizc6jv8y9r8chsda4yysim0ch45i3rasqvv7m85zqsskf75"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; + biocViews = derive2 { name="biocViews"; version="1.58.1"; sha256="1by2639z7n62z84dr8rj9jz12gsd1k8q42zsnxacxbwfwp6h0cl4"; depends=[Biobase BiocManager graph RBGL RCurl RUnit XML]; }; + biocthis = derive2 { name="biocthis"; version="1.0.10"; sha256="0f6zbxmyxwka1n89waccaz42sbj6snyxn7nggzmzm5lcfahb5g5g"; depends=[BiocManager fs glue rlang styler usethis]; }; + biomaRt = derive2 { name="biomaRt"; version="2.46.3"; sha256="0gwmd0ykpv0gyh34c56g5m12lil20fvig49f3ih1jxrxf3q4wmq7"; depends=[AnnotationDbi BiocFileCache httr openssl progress rappdirs stringr XML xml2]; }; + biomformat = derive2 { name="biomformat"; version="1.18.0"; sha256="105p0aphx7csxdd9nviqirwqc72liqbi79qjyn2z5fv21450pdpc"; depends=[jsonlite Matrix plyr rhdf5]; }; + biomvRCNS = derive2 { name="biomvRCNS"; version="1.30.0"; sha256="1zsgss1m5wfp7i6iirqghjhmdkdrgxpj1cvx48fxn54sjylcmhk1"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; + biosigner = derive2 { name="biosigner"; version="1.18.2"; sha256="0i18j4fk91x5017yk1l35c58k5aby22yh81zkp59irphpv9akvjn"; depends=[Biobase e1071 MultiDataSet randomForest ropls]; }; + biotmle = derive2 { name="biotmle"; version="1.14.0"; sha256="1i92w8llf2a4a1m6nf4v60pbd6c4gwwvjqj3n7lx4y3gl029146w"; depends=[assertthat BiocGenerics BiocParallel doFuture dplyr drtmle future ggplot2 ggsci limma S4Vectors SummarizedExperiment superheat tibble]; }; + biovizBase = derive2 { name="biovizBase"; version="1.38.0"; sha256="10jflvadfcgxq2jnfxkpn417xd8ibh3zllz9rsqnq5w3wgfr4fhq"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer rlang Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + biscuiteer = derive2 { name="biscuiteer"; version="1.4.0"; sha256="1y8bim3v4ljxz3q04hrarv8xc5d22y6wn0y4q2z6mj6afj8z2wd4"; depends=[Biobase BiocGenerics BiocParallel biscuiteerData bsseq data_table DelayedMatrixStats dmrseq GenomeInfoDb GenomicRanges gtools HDF5Array Homo_sapiens impute Matrix matrixStats Mus_musculus QDNAseq qualV R_utils readr Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + blacksheepr = derive2 { name="blacksheepr"; version="1.4.0"; sha256="167b48py7ni09sagr004nwmbp49l222djs91lbya5cr6adpwfmgv"; depends=[circlize ComplexHeatmap pasilla RColorBrewer SummarizedExperiment viridis]; }; + blima = derive2 { name="blima"; version="1.24.0"; sha256="101dh2skd1n0d25vp27nfw0x82s3dgdqs45fd3ci51g7s825mqix"; depends=[beadarray Biobase BiocGenerics Rcpp]; }; + bluster = derive2 { name="bluster"; version="1.0.0"; sha256="0izrf82m5znyrgai5y5jss4k2brabh4ajxdvnlwwc92l5bw7jp61"; depends=[BiocNeighbors BiocParallel igraph Matrix Rcpp S4Vectors]; }; + bnbc = derive2 { name="bnbc"; version="1.12.0"; sha256="0sk7aha6gh1kizzmhbgj2j87wjf63nj77491l7w58r8rk0naklbh"; depends=[BiocGenerics data_table EBImage GenomeInfoDb GenomicRanges IRanges matrixStats preprocessCore Rcpp rhdf5 S4Vectors SummarizedExperiment sva]; }; + brainflowprobes = derive2 { name="brainflowprobes"; version="1.4.1"; sha256="1qkpibh2rhs5k2af1mc23a19n85bhdcfhgwxn8n1z4mnl3x9m4wi"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 bumphunter cowplot derfinder derfinderPlot GenomicRanges GenomicState ggplot2 RColorBrewer]; }; + branchpointer = derive2 { name="branchpointer"; version="1.16.0"; sha256="087jal21g1sg9c4mx26w8mvanjf6vam9l3zfwdjhizqir7jpabs8"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; }; + breakpointR = derive2 { name="breakpointR"; version="1.8.0"; sha256="1q51v0rikiljy3c8xcpxi8i7l7zqgqa94jxw51pw6jw9dhlg2z11"; depends=[BiocGenerics breakpointRdata cowplot doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges Rsamtools S4Vectors]; }; + brendaDb = derive2 { name="brendaDb"; version="1.4.0"; sha256="1wignh6zjx9sv9ij0cycy3df6zjw8kn8igm74i2ccdlrlaagcgr4"; depends=[BiocFileCache BiocParallel crayon curl dplyr magrittr purrr rappdirs Rcpp rlang stringr tibble tidyr xml2]; }; + bridge = derive2 { name="bridge"; version="1.54.0"; sha256="0bj0701w5jzkcis1aqdvv12w1b6vd08dqk95mipsq1jja6n2qxlw"; depends=[rama]; }; + bsseq = derive2 { name="bsseq"; version="1.26.0"; sha256="0m4k1bi12kqrizc2kglxm5iqgbfgqp0rlbl0hh2jagb4kzqm2lyv"; depends=[beachmat Biobase BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit permute R_utils Rcpp rhdf5 S4Vectors scales SummarizedExperiment]; }; + bumphunter = derive2 { name="bumphunter"; version="1.32.0"; sha256="0hfl820kfxydv5kpgyly7sibv2sp6dqsmc78qm33n81w4z4j0mkk"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; + cBioPortalData = derive2 { name="cBioPortalData"; version="2.2.11"; sha256="0ixpp5i2sz0gyvrdn5j3z0xvm1dcpyhljcvmm91wl73f3vag55ji"; depends=[AnVIL BiocFileCache digest dplyr GenomeInfoDb GenomicRanges httr IRanges MultiAssayExperiment RaggedExperiment readr RTCGAToolbox S4Vectors SummarizedExperiment TCGAutils tibble tidyr]; }; + cTRAP = derive2 { name="cTRAP"; version="1.8.0"; sha256="0vwp42yj2w0x4y4fsbjv4jafxszmnk1x8qzws2f37m29qfc32gsq"; depends=[binr biomaRt cowplot data_table dplyr DT fgsea ggplot2 ggrepel highcharter httr limma pbapply R_utils readxl reshape2 rhdf5 scales shiny]; }; + caOmicsV = derive2 { name="caOmicsV"; version="1.20.0"; sha256="0zy932yhmxvsx5rcgijm6va8q8zslz90rq1a8rvj2v66ah4ldw1a"; depends=[bc3net igraph]; }; + calm = derive2 { name="calm"; version="1.4.0"; sha256="1v0py6dfqj7dpiczzbkc99iq3s9spsmkhkpkjrvk70bp58g9mdw6"; depends=[mgcv]; }; + canceR = derive2 { name="canceR"; version="1.24.0"; sha256="01cs7psy86kc0xbbkhdd596ravrar8qw49gnbspni04gzfdqna0q"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; + cancerclass = derive2 { name="cancerclass"; version="1.34.0"; sha256="1411hhqqgxlkrp6q4ma7mcydq3yj83q7b6njv2wl4qgbgyh7pmvw"; depends=[binom Biobase]; }; + casper = derive2 { name="casper"; version="2.24.2"; sha256="04wndh7mcnngd8xkh7rjzwcwh1x5p6c567j797gxsiw1iligkkml"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; + categoryCompare = derive2 { name="categoryCompare"; version="1.34.0"; sha256="06g132cr1dlc587pmal3x0q6la905rirkznq1rdk53rsx3qsd87f"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; }; + cbaf = derive2 { name="cbaf"; version="1.12.1"; sha256="05m6g4cb09s8g8m8mmxbzf4zr2cmvvm3skpajdxzkafkayz6i16k"; depends=[BiocFileCache cgdsr genefilter gplots RColorBrewer xlsx]; }; + ccfindR = derive2 { name="ccfindR"; version="1.10.0"; sha256="0snba2yncql9zsajj6237lxqlnq2rr4p99jxf9lhbai0mbirl725"; depends=[ape gtools irlba Matrix RColorBrewer Rcpp RcppEigen Rdpack Rmpi Rtsne S4Vectors SingleCellExperiment SummarizedExperiment]; }; + ccmap = derive2 { name="ccmap"; version="1.16.0"; sha256="0ph587ha2zbc47y374pnb39avlfmqfjqp0w0rxw5xg7j802rmr4k"; depends=[AnnotationDbi BiocManager ccdata data_table doParallel foreach lsa xgboost]; }; + ccrepe = derive2 { name="ccrepe"; version="1.26.0"; sha256="1sma3d8r5dxx2h7x70dkggnm11rr0krhmnz4z6na6b3p5nayscfk"; depends=[infotheo]; }; + ceRNAnetsim = derive2 { name="ceRNAnetsim"; version="1.2.1"; sha256="1fgln5drqfdh6pjsicq72xz2y6vyg679vb9anp39wizfwvbxwkc7"; depends=[dplyr furrr future ggplot2 ggraph igraph purrr rlang tibble tidygraph tidyr]; }; + celaref = derive2 { name="celaref"; version="1.8.0"; sha256="198lri5rngmaq1jn3gd7w79sdf2lfn1b49bcd0pjia7bnr3nvchf"; depends=[BiocGenerics DelayedArray dplyr ggplot2 magrittr MAST Matrix readr rlang S4Vectors SummarizedExperiment tibble]; }; + celda = derive2 { name="celda"; version="1.6.1"; sha256="1gv3syy5ravdp2g7z4iw649gkhz5anbkz5d35lpkqmxmv17c02l1"; depends=[circlize ComplexHeatmap data_table dbscan DelayedArray dendextend digest doParallel enrichR foreach ggdendro ggplot2 ggrepel gtable MAST Matrix matrixStats MCMCprecision multipanelfigure plyr pROC RColorBrewer Rcpp RcppEigen reshape2 Rtsne S4Vectors scales scater scran Seurat SingleCellExperiment stringi stringr SummarizedExperiment uwot withr]; }; + cellHTS2 = derive2 { name="cellHTS2"; version="2.54.0"; sha256="134a72lz05mcisvy9kvmwr432zhrsih4j7rnzb2q0zjyka8xxlx0"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit RColorBrewer splots vsn]; }; + cellTree = derive2 { name="cellTree"; version="1.20.0"; sha256="1ar77qfmnqsjcnhfwv6jdry8s0js8rww9l2r5k4gc2xcjfrm5mgh"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; }; + cellbaseR = derive2 { name="cellbaseR"; version="1.14.0"; sha256="1qs3vzf22cvbm6v7gcva56mir1wabx9sy95j2giqn85sckffhkrm"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; }; + cellity = derive2 { name="cellity"; version="1.18.0"; sha256="0587mwan3l2mqdjanqn9a03dk43zm6ad747qgfjn95xqgi6l96w1"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; + cellscape = derive2 { name="cellscape"; version="1.14.0"; sha256="17h8fjyfk4gmn9a8slp0kycwycj9n4zs49vzwhp0rad0yjs321hy"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; }; + cfDNAPro = derive2 { name="cfDNAPro"; version="1.0.0"; sha256="1ixi95809p5sxaaqfnay3lrq534cdsv87dif3nzfcikmw5bhf5c9"; depends=[dplyr ggplot2 magrittr quantmod rlang Rsamtools stringr]; }; + cghMCR = derive2 { name="cghMCR"; version="1.48.0"; sha256="1imll1iswp9x5rc34wdqdr49r0as2hjhsg6jcpg664w0bwqa29h2"; depends=[BiocGenerics CNTools DNAcopy limma]; }; + chimera = derive2 { name="chimera"; version="1.32.0"; sha256="18iyq62ail7l9m5gb1kaia81wg57k15hk00lzpv71hxh1i87cnf2"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; }; + chimeraviz = derive2 { name="chimeraviz"; version="1.16.1"; sha256="1bvas72yivn70gdbmqz1a64y0f7cwr0s9w4zqwgcpah9cwlw0hd5"; depends=[AnnotationDbi AnnotationFilter BiocStyle Biostrings data_table dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph gtools Gviz IRanges magick org_Hs_eg_db org_Mm_eg_db plyr RCircos RColorBrewer Rgraphviz rmarkdown Rsamtools S4Vectors]; }; + chipenrich = derive2 { name="chipenrich"; version="2.14.0"; sha256="01hv77vrnbvbmm5c45vzihn8k9ciwka251f1rbf9nxxax64vmvly"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra MASS mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; }; + chipseq = derive2 { name="chipseq"; version="1.40.0"; sha256="12pzq24aarvgxfmhcad0l5g951xqdvvi7bspgbsvlvmfkqd74j2v"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; + chopsticks = derive2 { name="chopsticks"; version="1.56.0"; sha256="0rrhc1q6fy5q85c60mwpsj4mcwbhhjqr3njrfq89xwkif52pgx38"; depends=[survival]; }; + chromDraw = derive2 { name="chromDraw"; version="2.20.0"; sha256="1kmqkzz0mg4yv8bw71zklmd2aw0q4z706qk2n8ish8l60zdwwnv4"; depends=[GenomicRanges Rcpp]; }; + chromPlot = derive2 { name="chromPlot"; version="1.18.0"; sha256="0vabxma08aa196mhmf8wi4mlqjm2qyq3ai2q5w37grg1py00xny3"; depends=[biomaRt GenomicRanges]; }; + chromVAR = derive2 { name="chromVAR"; version="1.12.0"; sha256="0dn04ijgq8fncn2bkvnd0lnabjg2s4mpb91b3kwvv3nkgjgfx819"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; + chromstaR = derive2 { name="chromstaR"; version="1.16.0"; sha256="0vgpb7g2cncdn82hia2yzzachyns2zbd7906662g990qjnp2xlm1"; depends=[bamsignals BiocGenerics chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; }; + chromswitch = derive2 { name="chromswitch"; version="1.12.0"; sha256="0i182x1q1ahx49mdh9v9d6vxdiq2x1hiiccrr6flmrchz4vzvgsy"; depends=[Biobase BiocParallel cluster dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats NMF rtracklayer S4Vectors tidyr]; }; + cicero = derive2 { name="cicero"; version="1.8.1"; sha256="12y857p4p0m7k72bimli8wjn9cd0gxjwcs3n7ri9pn9l9d42krqr"; depends=[assertthat Biobase BiocGenerics data_table dplyr FNN GenomicRanges ggplot2 glasso Gviz igraph IRanges Matrix monocle plyr reshape2 S4Vectors stringi stringr tibble tidyr VGAM]; }; + circRNAprofiler = derive2 { name="circRNAprofiler"; version="1.4.2"; sha256="0r1hfm3pc7c71irzmxmdwc27ns9hkymz4vhb4pqbli4xn37q7cg8"; depends=[AnnotationHub Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DESeq2 dplyr edgeR GenomeInfoDb GenomicRanges ggplot2 gwascat IRanges magrittr R_utils readr reshape2 rlang rtracklayer S4Vectors seqinr stringi stringr universalmotif]; }; + cisPath = derive2 { name="cisPath"; version="1.30.0"; sha256="178v24a5as5kk9sacpr8xc8y8mc8lqzv34n7hdn51a1ycyfb11s2"; depends=[]; }; + cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.28.0"; sha256="1v7bngimr4q93339n5njin7n2rgjjji3kqlk19gaz97wnhrp3pvx"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomeInfoDb GenomicRanges IRanges seqinr]; }; + cleaver = derive2 { name="cleaver"; version="1.28.0"; sha256="0mf8mc8m8zkbgv99x0ybpwxfb2l178r4m3afp1rdq78h7nbrxm9m"; depends=[Biostrings IRanges S4Vectors]; }; + clippda = derive2 { name="clippda"; version="1.40.0"; sha256="1kr127awabbc4as1wsfvrsa1r68f4ngm35gynlb4jj840sghg86z"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; + clipper = derive2 { name="clipper"; version="1.30.0"; sha256="1f9xplpb1r8d62rclz44r4g0dqkhi78whncjnh1m3yfh7d63nh8l"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; + cliqueMS = derive2 { name="cliqueMS"; version="1.4.0"; sha256="0qvjcs9ysk8f7251ng43vcy09shwdlnqlgn4hmpwpzcnviimjq32"; depends=[BH igraph matrixStats MSnbase qlcMatrix Rcpp RcppArmadillo xcms]; }; + clonotypeR = derive2 { name="clonotypeR"; version="1.28.0"; sha256="04r4f5v60yi7y15yy4idvlygyc2nl1a2jk02w44w2h86jyvdblfp"; depends=[]; }; + clst = derive2 { name="clst"; version="1.38.0"; sha256="0n9gn4ngz4r04zfqw1mkq6rsb59c7mi3d6miihf89nsi6q37cznn"; depends=[lattice ROC]; }; + clstutils = derive2 { name="clstutils"; version="1.38.0"; sha256="1ijw2m8mw4y9l5c7pnqs5gwqhhkq5pbnajfn0bd9sqwy4s2y5jgr"; depends=[ape clst lattice rjson RSQLite]; }; + clustComp = derive2 { name="clustComp"; version="1.18.0"; sha256="040k95122f8vzi9ix1lfd0j2nrhd5f2l0w4cwp6lxfqkvhcncxym"; depends=[sm]; }; + clusterExperiment = derive2 { name="clusterExperiment"; version="2.10.1"; sha256="04n3lcm7dh07sjkzyv83m55mx3lz0lkcy8yq9hi0zywqyrhyzz7z"; depends=[ape BiocGenerics cluster DelayedArray edgeR HDF5Array howmany kernlab limma locfdr Matrix matrixStats mbkmeans NMF phylobase pracma RColorBrewer Rcpp RSpectra S4Vectors scales SingleCellExperiment stringr SummarizedExperiment zinbwave]; }; + clusterProfiler = derive2 { name="clusterProfiler"; version="3.18.1"; sha256="04v1xsxfxxy8rdjfswv4crpzkx9592r2sh3cjh1kb54sd4lyb6si"; depends=[AnnotationDbi DOSE downloader dplyr enrichplot GO_db GOSemSim magrittr plyr qvalue rlang rvcheck tidyr]; }; + clusterSeq = derive2 { name="clusterSeq"; version="1.14.0"; sha256="1c0wplyshn6kg01rzybawwqxjqbdy8ik6cxg3xnfj3yx6c6n30j8"; depends=[baySeq BiocGenerics BiocParallel]; }; + clusterStab = derive2 { name="clusterStab"; version="1.62.0"; sha256="0v0in4i3q1rhja927cj8bj4xdgx6imndq4dvr8bb2fsvycj9z7cs"; depends=[Biobase]; }; + clustifyr = derive2 { name="clustifyr"; version="1.2.0"; sha256="1i635n86pfmzv9qra48wiswl3cgy684rhjw6wzspy5pjagldq0xw"; depends=[cowplot dplyr entropy fgsea ggplot2 httr Matrix matrixStats proxy readr rlang S4Vectors scales SingleCellExperiment stringr SummarizedExperiment tibble tidyr]; }; + cmapR = derive2 { name="cmapR"; version="1.2.1"; sha256="0i3kb01xkwaaq4kqw6nwnrj3jk78zlq117sc82yzlz6m65f91whv"; depends=[data_table flowCore matrixStats rhdf5 SummarizedExperiment]; }; + cn_farms = derive2 { name="cn.farms"; version="1.38.0"; sha256="001a5rvkq8kdblybr30mnl0v0jqm7qip518njfhhlc3g46pwhahv"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; + cn_mops = derive2 { name="cn.mops"; version="1.36.0"; sha256="1r5m0791c4inh8yyrsbqbn5dncrx1nx5pqi2gm5rhfwwca6a6crf"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; + cnvGSA = derive2 { name="cnvGSA"; version="1.34.0"; sha256="0nzg3nr2giddcv2jlgypb264i2gxgdksfjrr6xx8gilha814a14w"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; + coGPS = derive2 { name="coGPS"; version="1.34.0"; sha256="1vvrarixpvjyv769pbhmshpd5xl2a2qsx1rf362k7zqdyl6ikihs"; depends=[]; }; + coMET = derive2 { name="coMET"; version="1.22.0"; sha256="1y26nfmvfp2f466phyv6k4if8zhz2z7b1ljrkwkviwrr8pzc8pr8"; depends=[biomaRt colortools corrplot GenomicRanges gridExtra Gviz hash IRanges psych rtracklayer S4Vectors]; }; + coRdon = derive2 { name="coRdon"; version="1.8.0"; sha256="1msrasdci9zc6dk8r0haqvkz2v89nncwxv9ignz993ks8m86bncc"; depends=[Biobase Biostrings data_table dplyr ggplot2 purrr stringr]; }; + codelink = derive2 { name="codelink"; version="1.58.0"; sha256="07019p9cxz0vr1fchw5aj2d7g1wyh6kxh80cnwyvc292p7y7wxql"; depends=[annotate Biobase BiocGenerics limma]; }; + coexnet = derive2 { name="coexnet"; version="1.12.0"; sha256="1ccz2phfxrfqc0q6c505yskancmg0bi22p8jn60kygfvy2hirw08"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; }; + cogena = derive2 { name="cogena"; version="1.24.0"; sha256="08rxbpd4w0df3sm3pjvhkrnh95543kdcyakzi9kwna6nz6f4kzd2"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2 stringr tibble tidyr]; }; + cola = derive2 { name="cola"; version="1.6.0"; sha256="1qbsc2ja8crc8fpf0qdbqwlqcggvqj3ih986r6dprz1613bqr6zf"; depends=[BiocGenerics brew circlize clue cluster ComplexHeatmap crayon digest eulerr GetoptLong GlobalOptions httr impute knitr markdown matrixStats mclust microbenchmark png RColorBrewer Rcpp skmeans xml2]; }; + combi = derive2 { name="combi"; version="1.2.0"; sha256="17jiknjrxcl798blwj3mnx45fjqssivw9mf7vq9bz168dnb76cxz"; depends=[alabama BB Biobase cobs ggplot2 limma Matrix nleqslv phyloseq reshape2 SummarizedExperiment tensor vegan]; }; + compEpiTools = derive2 { name="compEpiTools"; version="1.24.0"; sha256="0jjy8z3z01k8khrrwm7d5kyai5v41adz1ms3j9wibhpr293gg4yw"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; + compartmap = derive2 { name="compartmap"; version="1.8.0"; sha256="00zflkznqpbhmagv5pswg6h6g508lcsjdins17fd0rcirp2lxy5p"; depends=[GenomicRanges gtools Homo_sapiens minfi mixOmics SummarizedExperiment]; }; + compcodeR = derive2 { name="compcodeR"; version="1.26.1"; sha256="05bl66awzadrq0z7pgzasrq2chyl4drz81msrvynvb019f9cb894"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; + consensus = derive2 { name="consensus"; version="1.8.0"; sha256="0gslsbnqjamyaxcrv0f4wwz222zv0kvikih2xakbhr00wywr1gwv"; depends=[gplots matrixStats RColorBrewer]; }; + consensusDE = derive2 { name="consensusDE"; version="1.8.0"; sha256="1glpcqcrvjxgh5ldpiy4a7ryahv47ks2j9lzgdll1ccr4sb18rfr"; depends=[airway AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings data_table dendextend DESeq2 EDASeq edgeR EnsDb_Hsapiens_v86 ensembldb GenomicAlignments GenomicFeatures limma org_Hs_eg_db pcaMethods RColorBrewer Rsamtools RUVSeq S4Vectors SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm3_ensGene]; }; + consensusOV = derive2 { name="consensusOV"; version="1.12.0"; sha256="0pw2h8mal1rz1y43cyh14bhcnqv2dk41m12rsdjdnj5jgn9s74i4"; depends=[Biobase gdata genefu GSVA limma matrixStats randomForest]; }; + consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.18.0"; sha256="19r5naghqsv77v40qq4kdz4h0ig72zj6n8s0013r4dikarkdg7k4"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; }; + contiBAIT = derive2 { name="contiBAIT"; version="1.18.0"; sha256="1xmmyd9gvjg5hbs9g868qrnd0p3c13hzjkpgzip65mk5p7yib6q6"; depends=[BH BiocGenerics BiocParallel clue cluster colorspace data_table diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; + conumee = derive2 { name="conumee"; version="1.24.0"; sha256="1z06l5qgppbcxp988gfqz2g07m0b0102wkxn5fzkghdc6mviz51q"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; }; + convert = derive2 { name="convert"; version="1.66.0"; sha256="13zbs365q9kp627hrgfnqcvldfn6gi89ifv61p4im6i0jk7snchc"; depends=[Biobase limma marray]; }; + copa = derive2 { name="copa"; version="1.58.0"; sha256="0crnx31hhnwl12j6gfv2magb3104gsgl0say4g3vl4rw654icylq"; depends=[Biobase]; }; + copynumber = derive2 { name="copynumber"; version="1.30.0"; sha256="00fyfy3kpz33v1hqisd5m5xdazwjmjrfj8ssbf6p9m3am2ar23gm"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; + corral = derive2 { name="corral"; version="1.0.0"; sha256="1s92ac29gypv384k6fsr1d6llykn9i514i6xxlrjhsg2ajyd8xwq"; depends=[ggplot2 ggthemes gridExtra irlba Matrix MultiAssayExperiment pals SingleCellExperiment SummarizedExperiment transport]; }; + coseq = derive2 { name="coseq"; version="1.14.0"; sha256="0a9r54gcxay2s9vxgvbja19ilq58qpnd98cy0wzllagxs1my7hzh"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; }; + cosmiq = derive2 { name="cosmiq"; version="1.24.0"; sha256="0rcv1rbdnhiwwsh7a0b690c8lcv1vmm6xgvsgfjgxp07rfz5zxkp"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; + countsimQC = derive2 { name="countsimQC"; version="1.8.1"; sha256="12rpdb9jzyv8lhs99nhxkbpxr0cy7gdfxs7ijns7ffkq7ycc4jjq"; depends=[caTools DESeq2 dplyr DT edgeR genefilter GenomeInfoDbData ggplot2 randtests rmarkdown SummarizedExperiment tidyr]; }; + covEB = derive2 { name="covEB"; version="1.16.0"; sha256="0721j8xd3dzkcplrzrnsk6fcc1sbzfsi3y94vynbr37qzasg0ff7"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; }; + covRNA = derive2 { name="covRNA"; version="1.16.0"; sha256="06bk9lz6bd1lm3y6g6y0i9s3nwsmp4lzw8li0ydsd6kcqwz1s08v"; depends=[ade4 Biobase genefilter]; }; + cpvSNP = derive2 { name="cpvSNP"; version="1.22.0"; sha256="1il0g85s93mvpfx88pykqpd7kmxkaj4hyrcji5z8jr8rqk16x8mj"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; + cqn = derive2 { name="cqn"; version="1.36.0"; sha256="02a7xzkkid2gix1q7bmn6al72dx886qpycvn72ahn866z89bsskf"; depends=[mclust nor1mix preprocessCore quantreg]; }; + crisprseekplus = derive2 { name="crisprseekplus"; version="1.16.0"; sha256="04d2laiigdjipiw3a8jh9iib1cbrxmc4f4wyjmb36bkiabad0fk7"; depends=[AnnotationDbi BiocManager BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; }; + crlmm = derive2 { name="crlmm"; version="1.48.0"; sha256="1vk2dd1acia8pxzdl6djfv96b7i4bjvmb72hqlf1jgaxqf1zxznj"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen VGAM]; }; + crossmeta = derive2 { name="crossmeta"; version="1.16.1"; sha256="17jvpvrcm61nvw0dqwqnk2a6v94i1d872m426y02mgia1i02n8av"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocManager data_table DBI DT fdrtool GEOquery limma matrixStats metaMA miniUI oligo randomcoloR RColorBrewer RCurl reader readxl RSQLite shiny shinyBS shinyjs shinypanel shinyWidgets statmod stringr sva XML]; }; + csaw = derive2 { name="csaw"; version="1.24.3"; sha256="1m4gls7qmrnlr3ss2bfx4fvqwq8zf3hws974iw0h4l2gnvy1kb2a"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Matrix Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; + ctc = derive2 { name="ctc"; version="1.64.0"; sha256="1nwlphbfba3w8ixck02k5c84qm4flnp9fd68li0jn5a08qi9gmyp"; depends=[amap]; }; + ctgGEM = derive2 { name="ctgGEM"; version="1.2.0"; sha256="0jx5vbbxpynay1maihz0faaqfhj3v85mfz878244411mzwjn4ldb"; depends=[Biobase BiocGenerics destiny HSMMSingleCell igraph monocle sincell SummarizedExperiment TSCAN]; }; + ctsGE = derive2 { name="ctsGE"; version="1.16.0"; sha256="1ksg1zf9h5prxad70hjhw2yif3k09h27mxi4ylknam5baknl1ygf"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; }; + cummeRbund = derive2 { name="cummeRbund"; version="2.32.0"; sha256="1x7rby50api1c66al6a0i92q82ydjmh3h8l2k7hj0ffpn8c5pdgj"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; }; + customCMPdb = derive2 { name="customCMPdb"; version="1.0.0"; sha256="0qvws4g0935pzzb7gwrv2bwhs7pvnaf48k9473x7pkhsvpxlih1d"; depends=[AnnotationHub BiocFileCache ChemmineR rappdirs RSQLite XML]; }; + customProDB = derive2 { name="customProDB"; version="1.30.1"; sha256="0hln4zyyi1ms9viw81rw1cnkzd629z7vjal2asj9sv8dr2nkf5rr"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings DBI GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; }; + cycle = derive2 { name="cycle"; version="1.44.0"; sha256="0v7zarppd48bh0x34yw2191l6dw5dbfzgv5fysd1b2ww0h0385bq"; depends=[Biobase Mfuzz]; }; + cydar = derive2 { name="cydar"; version="1.14.1"; sha256="014n45vnfa9as77hj05lbgqdg860ri2avv2jij42l0fj0pm810d8"; depends=[Biobase BiocGenerics BiocNeighbors BiocParallel flowCore Rcpp S4Vectors shiny SingleCellExperiment SummarizedExperiment viridis]; }; + cytofast = derive2 { name="cytofast"; version="1.6.0"; sha256="01i2hxh5irjwk5lf9vylblinxy5mipl5m091d2yjpsnbr8d4qg6i"; depends=[flowCore FlowSOM ggplot2 ggridges RColorBrewer Rdpack reshape2]; }; + cytolib = derive2 { name="cytolib"; version="2.2.1"; sha256="0y8mxrg3jh9bahsf9rblgyja37m1x1ncxfnrli91xjyg0582kh7r"; depends=[BH Rcpp RcppArmadillo RcppParallel Rhdf5lib RProtoBufLib]; }; + cytomapper = derive2 { name="cytomapper"; version="1.2.1"; sha256="0lv4v69c5mbi967h5dqfiqixl50s40f5hfiymh6msgjwfd9lb0a5"; depends=[EBImage ggbeeswarm ggplot2 matrixStats raster RColorBrewer S4Vectors shiny shinydashboard SingleCellExperiment SummarizedExperiment svglite svgPanZoom viridis]; }; + daMA = derive2 { name="daMA"; version="1.62.0"; sha256="0sygy03vzfiqmm0ll0c28dm3q5knhif3nvrh3r3gwk59fa9w5xbc"; depends=[MASS]; }; + dada2 = derive2 { name="dada2"; version="1.18.0"; sha256="0lq4w04p0k70qhai8c0krh47vz3f5c3zpb06r1fbxbz6czg600a0"; depends=[BiocGenerics Biostrings ggplot2 IRanges Rcpp RcppParallel reshape2 ShortRead XVector]; }; + dagLogo = derive2 { name="dagLogo"; version="1.28.1"; sha256="1ppkzdayxx5r9kdnjh3drzs0w7kd72byw69kq3bqa62j2c0wyq6d"; depends=[BiocGenerics biomaRt Biostrings motifStack pheatmap UniProt_ws]; }; + dasper = derive2 { name="dasper"; version="1.0.0"; sha256="1mfsh8l2jn36aq9if1la902fmx3vlhq0v9f8vdg4mcs3a9d15zzx"; depends=[basilisk BiocFileCache BiocParallel data_table dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges magrittr megadepth plyranges readr reticulate S4Vectors stringr SummarizedExperiment tidyr]; }; + dcGSA = derive2 { name="dcGSA"; version="1.18.0"; sha256="0w85a3pmgzk4nrbaq0b4hk2dah067m69cbyxs17ir4knky2g315s"; depends=[BiocParallel Matrix]; }; + dcanr = derive2 { name="dcanr"; version="1.6.0"; sha256="1r07h55s83413hdw0nxf713fws4x5jvnn7pq6ldidl21fqsmi32l"; depends=[circlize doRNG foreach igraph Matrix plyr RColorBrewer reshape2 stringr]; }; + ddCt = derive2 { name="ddCt"; version="1.46.0"; sha256="12jj1kms2hhaf7ysxzy7ngcdxl1ks3747d9jfq46vnmf34ljj8jy"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; + ddPCRclust = derive2 { name="ddPCRclust"; version="1.10.0"; sha256="12zk7c5brcvdwqrqxfsph7gn73h389vw3b0ybfqnvjmya3bzhnl1"; depends=[clue flowCore flowDensity flowPeaks ggplot2 openxlsx plotrix R_utils SamSPECTRAL]; }; + dearseq = derive2 { name="dearseq"; version="1.2.0"; sha256="1w39wa07lwi1272jlbfgr49x8jf9pwh8k4rhl4y4hjx7p20ncyil"; depends=[CompQuadForm ggplot2 KernSmooth matrixStats pbapply statmod]; }; + debCAM = derive2 { name="debCAM"; version="1.8.0"; sha256="0z0rmrn2ryjhwn0mipz0vafzqb8r73fpkj7px451avxjycljy7v7"; depends=[apcluster Biobase BiocParallel corpcor geometry NMF nnls pcaPP rJava SummarizedExperiment]; }; + debrowser = derive2 { name="debrowser"; version="1.18.3"; sha256="0mzi6hrhnbx5wih0mmz0a548mb1zgbmszl7ffq97arikhsskixjp"; depends=[annotate AnnotationDbi apeglm ashr clusterProfiler colourpicker DESeq2 DOSE DT edgeR enrichplot GenomicRanges ggplot2 gplots Harman heatmaply igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview plotly RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva]; }; + deco = derive2 { name="deco"; version="1.6.0"; sha256="1biwndsckdjf8783rrb33d5fp7nvagncmdakyaq0l67pj2ywp9cw"; depends=[ade4 AnnotationDbi Biobase BiocParallel BiocStyle cluster foreign gdata ggplot2 gplots gridExtra limma locfit made4 RColorBrewer reshape2 scatterplot3d sfsmisc SummarizedExperiment]; }; + decompTumor2Sig = derive2 { name="decompTumor2Sig"; version="2.6.0"; sha256="03lck4jdfps3xyw6d2c8pzfhh7sjqz9b2k0zcrxjva08xdw6r6xd"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gridExtra Matrix plyr quadprog S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + decontam = derive2 { name="decontam"; version="1.10.0"; sha256="1y6xqzn1j8f6ahpjq1b91ni82m9vp34g5fyw088cq0ann8zl58fw"; depends=[ggplot2 reshape2]; }; + deepSNV = derive2 { name="deepSNV"; version="1.36.0"; sha256="1lbvx9liql8fkb4y020kwpgp61vzg67cy640dc4kybglcw9dx6j0"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; + deltaCaptureC = derive2 { name="deltaCaptureC"; version="1.4.0"; sha256="14wzi351rvgpzmyjwwh4lkd0c99ff4qdssgjlyi6xighfikkk4fh"; depends=[DESeq2 GenomicRanges ggplot2 IRanges SummarizedExperiment]; }; + deltaGseg = derive2 { name="deltaGseg"; version="1.30.0"; sha256="0k6ncsgnp4hdl2daa8wgikfmpm91hz42xinzpzg2mrk6gb83nn0l"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; + densvis = derive2 { name="densvis"; version="1.00.6"; sha256="17vq023axxwcsdaq5fqamv7r2q5l96zad8dlp1xhdvva1lncf20c"; depends=[assertthat basilisk Rcpp reticulate]; }; + derfinder = derive2 { name="derfinder"; version="1.24.2"; sha256="02av756qws54xziajdqs3z8jwrqqzy05yqasb8f853766vb21jpj"; depends=[AnnotationDbi BiocGenerics BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; + derfinderHelper = derive2 { name="derfinderHelper"; version="1.24.1"; sha256="1j6mvrr0m14jmvx9rjbl7xnhi9ng4nsx75i9445wa0zlz4iklpcb"; depends=[IRanges Matrix S4Vectors]; }; + derfinderPlot = derive2 { name="derfinderPlot"; version="1.24.1"; sha256="06dn08rhmnkjgwxb7sgp19vgybm6y22dv18bjnwhh0yx76c8dhfj"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; }; + destiny = derive2 { name="destiny"; version="3.4.0"; sha256="1i7f5q02zvpfaxhd76fbw0h1wfgjphyn5hrmrjpvlnv4ardzsir2"; depends=[Biobase BiocGenerics ggplot_multistats ggplot2 ggthemes irlba knn_covertree Matrix pcaMethods proxy Rcpp RcppEigen RcppHNSW RSpectra scales scatterplot3d SingleCellExperiment smoother SummarizedExperiment tidyr tidyselect VIM]; }; + dexus = derive2 { name="dexus"; version="1.30.0"; sha256="1r36d1flvc0qqng3rfxf3ndvcq7d4njyn5irfyn5i18ag2l0zzc2"; depends=[BiocGenerics]; }; + diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.72.0"; sha256="05zmrlxp1l007i449ihnhax0hb5b5kawydwgn6m3wny0bll53q0b"; depends=[minpack_lm]; }; + diffHic = derive2 { name="diffHic"; version="1.22.0"; sha256="1mpcfmz9xixbznzg77kzs5p5c2dkh82kaxyqk7lbacsmixhq61lv"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment zlibbioc]; }; + diffcoexp = derive2 { name="diffcoexp"; version="1.10.0"; sha256="1qcsgkqdq3ribzazdng6wi1x4l48fmi8c8r0k95a1vkmndzc44x2"; depends=[BiocGenerics DiffCorr igraph psych SummarizedExperiment WGCNA]; }; + diffcyt = derive2 { name="diffcyt"; version="1.10.0"; sha256="068hv0r3lmyvi5ql2ijzbkm9h1n1xb9c8dlmy55syyxdmksfhpn9"; depends=[circlize ComplexHeatmap dplyr edgeR flowCore FlowSOM limma lme4 magrittr multcomp reshape2 S4Vectors SummarizedExperiment tidyr]; }; + diffloop = derive2 { name="diffloop"; version="1.18.0"; sha256="1m19r72jsd63v02smpxq60y7m7s22m7phlhc844r9vncpw2801rj"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; }; + diffuStats = derive2 { name="diffuStats"; version="1.10.2"; sha256="0vdwja0jybcp3a2cwn8kbcbr4qkm2m1riqng2kyyfni1z4d0nprr"; depends=[checkmate expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; }; + diggit = derive2 { name="diggit"; version="1.22.0"; sha256="0qwpwagjbygzs7azgrd7870jx73q76qxssird1zpjl822z51j4k6"; depends=[Biobase ks viper]; }; + discordant = derive2 { name="discordant"; version="1.14.0"; sha256="1kb6n5m3vwdgrb7ng53pqhqsz8qhpx1jl8mvjv3j1bhckjks1bmc"; depends=[Biobase biwt gtools MASS]; }; + distinct = derive2 { name="distinct"; version="1.2.0"; sha256="1cmgsjfxs2m3ilzvgmv6q03drxp5pv5p3rxd524rzd6hyi5l4kc6"; depends=[doParallel doRNG foreach ggplot2 limma Matrix Rcpp RcppArmadillo scater SingleCellExperiment SummarizedExperiment]; }; + dittoSeq = derive2 { name="dittoSeq"; version="1.2.6"; sha256="1ncr46gfpjwmcpvybbqds769rpdv4la7ay13hbzxncjy94lnb3wa"; depends=[colorspace cowplot edgeR ggplot2 ggrepel ggridges gridExtra pheatmap reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; + divergence = derive2 { name="divergence"; version="1.6.0"; sha256="0glblmsriz72dvvh1m99k1skwwlnmr954zzp4crm7xndkqjsmgpv"; depends=[SummarizedExperiment]; }; + dks = derive2 { name="dks"; version="1.36.0"; sha256="04v3dncywbiybrhnjjjx3lszb0z3kzqvvjaq6nwqx6yc2galaq8f"; depends=[cubature]; }; + dmrseq = derive2 { name="dmrseq"; version="1.10.1"; sha256="002clhcc5w3jbfmxrnfgbp4kgv7zmbiyk9p17lq2193d3f3ssi86"; depends=[AnnotationHub annotatr BiocParallel bsseq bumphunter DelayedMatrixStats GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats nlme outliers RColorBrewer rtracklayer S4Vectors]; }; + doppelgangR = derive2 { name="doppelgangR"; version="1.18.0"; sha256="1hc65j5600xc9rn8q8fz39lcibmn7h99dpyypvva79kk287qg09d"; depends=[Biobase BiocParallel digest impute mnormt SummarizedExperiment sva]; }; + doseR = derive2 { name="doseR"; version="1.6.0"; sha256="1003x9rbjda2hagnbrrqw5q2vj82k8b0frhl1kgx3k78yv3xq096"; depends=[digest edgeR lme4 matrixStats mclust RUnit S4Vectors SummarizedExperiment]; }; + dpeak = derive2 { name="dpeak"; version="1.2.0"; sha256="1q6xsbq4bpdx35fsk7zzzb04vc584jr6sy7f7ls82q8d9njj69xv"; depends=[BSgenome IRanges MASS Rcpp]; }; + drawProteins = derive2 { name="drawProteins"; version="1.10.0"; sha256="1vbjv3xyjrrdmw7bvdx0l760n8nrgjzj3qjfz5h2ss1b9a7pjk6r"; depends=[dplyr ggplot2 httr readr tidyr]; }; + dualKS = derive2 { name="dualKS"; version="1.50.0"; sha256="0y0076ip7kwbjfkg0vyvaxws0lgjd9i05j0dzwwcf2b5cgvy9lgc"; depends=[affy Biobase]; }; + dupRadar = derive2 { name="dupRadar"; version="1.20.0"; sha256="1m72bqpnn98zi14g7zinlmp47xdlwnayrzvz74xsbd6zqbkfq8m4"; depends=[Rsubread]; }; + dyebias = derive2 { name="dyebias"; version="1.50.0"; sha256="0qvbhpvjsj59r2qabj5mcdcnjq2dj6llf37rcl6idxzw9caijrn3"; depends=[Biobase marray]; }; + easyreporting = derive2 { name="easyreporting"; version="1.2.0"; sha256="022g4xb55qnz1hz8jlzr7v2m9073w2f1g9z7cnrypvl12b7z5c6r"; depends=[rmarkdown]; }; + ecolitk = derive2 { name="ecolitk"; version="1.62.0"; sha256="0wa992fm4mhx91246zj0ynbnxd5dy58msq7x8qvjwmnhbxp9cn9c"; depends=[Biobase]; }; + edge = derive2 { name="edge"; version="2.22.0"; sha256="1iq2j365yplsfn5kzzr9cd7yq71y7jv222dxa1yx11cyqfwhr7b1"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; + edgeR = derive2 { name="edgeR"; version="3.32.1"; sha256="1gaic8qf6a6sy0bmydh1xzf52w0wnq31aanpvw3a30pfsi218bcp"; depends=[limma locfit Rcpp]; }; + eegc = derive2 { name="eegc"; version="1.16.0"; sha256="07hwc75mifmkag6v0a1l2xgka53q9fgrgg9g2n826y6j7rw47rm5"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; + eiR = derive2 { name="eiR"; version="1.30.0"; sha256="0r9hmpryi379k7d1ipwqhdahyqpb9w032qjlhj5vgjjijx5w6yc3"; depends=[BiocGenerics ChemmineR DBI digest gespeR RcppAnnoy RCurl RUnit snow snowfall]; }; + eisa = derive2 { name="eisa"; version="1.42.0"; sha256="0ji0nxcgnzvvhj8nqimr0i82wkwhyh0rcdxiav9207jl81qkbpj7"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; + eisaR = derive2 { name="eisaR"; version="1.2.0"; sha256="169zf52rcapcjyxzn9zwajjw35zh72x42n65l0vdyxjjcymgxqdh"; depends=[AnnotationDbi BiocGenerics edgeR GenomicFeatures GenomicRanges IRanges limma rtracklayer S4Vectors SummarizedExperiment]; }; + enrichTF = derive2 { name="enrichTF"; version="1.6.0"; sha256="0qv5q6sc0b8ac4z4bncjx4f3f79bqi9609zl6n1gzymvvqgdmv21"; depends=[BiocGenerics BSgenome clusterProfiler GenomeInfoDb GenomicRanges ggplot2 ggpubr heatmap3 IRanges JASPAR2018 magrittr motifmatchr pipeFrame R_utils rmarkdown rtracklayer S4Vectors TFBSTools]; }; + enrichplot = derive2 { name="enrichplot"; version="1.10.2"; sha256="0lm5yapd567jxcnz9m4a623aymf3q00svjrxp3rf0r9j77dgyisv"; depends=[cowplot DOSE ggplot2 ggraph GOSemSim igraph magrittr plyr purrr RColorBrewer reshape2 scatterpie shadowtext]; }; + ensemblVEP = derive2 { name="ensemblVEP"; version="1.32.1"; sha256="1b9v5nad124akwps7qli44xb39yqlgzc851bys3j59qz8vsnw4xd"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; + ensembldb = derive2 { name="ensembldb"; version="2.14.1"; sha256="1hxwfh19qafpdhzprvw4nr8ks3gz7f0y8gyfhk8yqmmvvnvgqv40"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; }; + epiNEM = derive2 { name="epiNEM"; version="1.14.1"; sha256="0kbjwjm18m627ywmr64dxasls1sy9fipjk5f6bp64fcidswv6piz"; depends=[BoolNet e1071 graph gtools igraph lattice latticeExtra minet mnem pcalg RColorBrewer]; }; + epigenomix = derive2 { name="epigenomix"; version="1.30.0"; sha256="05baryj0np73hfm0vrwmfd4fcjhvz0zfxq4ims2bj6a3shhqf1v1"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; + epihet = derive2 { name="epihet"; version="1.6.1"; sha256="1dsq8117pbccbmyq64cnm0ldpsab6rxyjp5rkgfs27d8sc0f8r4j"; depends=[data_table doParallel EntropyExplorer foreach GenomicRanges ggplot2 igraph IRanges pheatmap qvalue ReactomePA Rtsne S4Vectors WGCNA]; }; + epivizr = derive2 { name="epivizr"; version="2.20.0"; sha256="13san5i3q39x4pwxyjwaiw7633hsl4vwhnz5k4k361fvz423a6qv"; depends=[bumphunter epivizrData epivizrServer GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + epivizrChart = derive2 { name="epivizrChart"; version="1.12.0"; sha256="0j8xfl2yxwhbxlsxfi132zhpqbd7n8sn1ikrb6w3agvxikcxx6a2"; depends=[BiocGenerics epivizrData epivizrServer htmltools rjson]; }; + epivizrData = derive2 { name="epivizrData"; version="1.18.0"; sha256="11kxxjnhlh4cb0l88in3f63ppwpprsbx164dxszdlkmng7rcnalm"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; + epivizrServer = derive2 { name="epivizrServer"; version="1.18.0"; sha256="1bi25kk23si6j8bczhwdk84687gc89bnyjhp08na6j8qpflfa0vv"; depends=[httpuv mime R6 rjson]; }; + epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.18.0"; sha256="05nwwfhfsramv7a2krm1jy2xgwm0whgjw61gak69ak4pq2sr9gvh"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; + erccdashboard = derive2 { name="erccdashboard"; version="1.24.0"; sha256="08x4dpzbgkmzw4as16p7dmrp9mypdrr3aj08m32j9rnnq6hrb3sc"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; }; + erma = derive2 { name="erma"; version="1.6.0"; sha256="1k2j1xhv0vwn45xmh8ds0gz812px5hnpgzvp37ngsdn4j5ai1l0k"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel GenomeInfoDb GenomicFiles GenomicRanges ggplot2 Homo_sapiens IRanges rtracklayer S4Vectors shiny SummarizedExperiment]; }; + esATAC = derive2 { name="esATAC"; version="1.12.0"; sha256="1zjn76q546f22qh50j8nkwjv3f89iid91a9py0dcdlfkg6f1yvl4"; depends=[AnnotationDbi BiocGenerics BiocManager Biostrings BSgenome ChIPseeker clusterProfiler corrplot digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2018 knitr magrittr motifmatchr pipeFrame R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; }; + escape = derive2 { name="escape"; version="1.0.1"; sha256="0yhnq8qy4xjm0m3g1paq0wncha5yc616icarhaq9ggmrqmhzmfc4"; depends=[BiocParallel dplyr ggplot2 ggridges GSEABase GSVA limma Matrix msigdbr SingleCellExperiment]; }; + esetVis = derive2 { name="esetVis"; version="1.16.0"; sha256="15smsm6d7gw2rbgwg0pip57l7a33r193dhg0vm5yhqvm6whg4d7f"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; + eudysbiome = derive2 { name="eudysbiome"; version="1.20.0"; sha256="07l1yfwyamsl67sszhldz1wdmcr1sbi36765f09mv7n99y8l2rq6"; depends=[Biostrings plyr R_utils Rsamtools]; }; + evaluomeR = derive2 { name="evaluomeR"; version="1.6.6"; sha256="1axmvnhij0wg8zv07vp4v1xi1pa173zbch5alvd183fcy5mgyk65"; depends=[class cluster corrplot flexmix fpc ggdendro ggplot2 kableExtra MASS matrixStats mclust MultiAssayExperiment plotrix prabclus randomForest Rdpack reshape2 SummarizedExperiment]; }; + exomeCopy = derive2 { name="exomeCopy"; version="1.36.0"; sha256="0zczaasz80nch0ixsx23fzdzdf140rw6llm5gs2b7gh3y8zbd5ns"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; + exomePeak2 = derive2 { name="exomePeak2"; version="1.2.0"; sha256="0608pj058ppz9rhjpga00kmjp4cp6mxmqbb31mys3cvfahqs3s9r"; depends=[apeglm Biobase BiocParallel Biostrings BSgenome cqn DESeq2 genefilter GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges mclust reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + explorase = derive2 { name="explorase"; version="1.53.0"; sha256="1g23swv1m66sc7sxjh7jm0lrfrbzs01pbdsrgv2jl1fgp15jhly8"; depends=[limma RGtk2]; }; + fCCAC = derive2 { name="fCCAC"; version="1.16.0"; sha256="1hjhbsxzl3z11c0d09nb2ksv9mgjqvi78jh9yk1xmnnq7qkwv5ls"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; }; + fCI = derive2 { name="fCI"; version="1.20.0"; sha256="0d03gabb5sf2vhhn84jdk9pn06gv9ipqf6ix4mzflrsazcv7dnm8"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; + fabia = derive2 { name="fabia"; version="2.36.0"; sha256="1kkfjpyk6qk5s1r7wdzlykzsyxs78blawlgh1gs3l130iaacgl0g"; depends=[Biobase]; }; + factDesign = derive2 { name="factDesign"; version="1.66.0"; sha256="0anshgfp4wvvjblp1ksw7zj96kxldikmh7n7jn8y2whh82k7md1k"; depends=[Biobase]; }; + famat = derive2 { name="famat"; version="1.0.0"; sha256="13q30a79l78fg6zzk1jni8286yrylpk3fvfxf6nvgv3am6jvyh4i"; depends=[clusterProfiler dplyr DT GO_db gprofiler2 KEGGREST magrittr MPINet ontologyIndex org_Hs_eg_db plotly reactome_db rWikiPathways shiny shinyBS shinydashboard stringr tidyr]; }; + farms = derive2 { name="farms"; version="1.42.0"; sha256="1x56p6zjmsjl5l810v0bqprrdp5lxnixxd6nw31g53xpkarnwsjw"; depends=[affy Biobase MASS]; }; + fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.26.0"; sha256="0bixd7am1bydf1kiwrqghq99qxd20yx2vly85rdqj1v40a5wmnjl"; depends=[doParallel Hmisc impute LiquidAssociation preprocessCore WGCNA]; }; + fastseg = derive2 { name="fastseg"; version="1.36.0"; sha256="1ln6w93ag4wanp0nrm0pqngbfc88w95zq2kcj583hbxy885dkg4f"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; }; + fcScan = derive2 { name="fcScan"; version="1.4.0"; sha256="0gk1cjwmnm2143w8x73fy9bfrw5wjl391clzvbd08kczzdwlk08s"; depends=[GenomicRanges IRanges plyr rtracklayer SummarizedExperiment VariantAnnotation]; }; + fcoex = derive2 { name="fcoex"; version="1.4.0"; sha256="0b2dk1q5ffsznci2svbz7d4glf74vzis6k6qydvhdx3bbyd2yvi9"; depends=[clusterProfiler data_table dplyr FCBF ggplot2 ggrepel igraph intergraph network pathwayPCA progress scales SingleCellExperiment sna stringr]; }; + fdrame = derive2 { name="fdrame"; version="1.62.0"; sha256="0c41l3s8112g2i73fw1bqmnakcfy8kvk47pl04p9bmp6bkyw7zwn"; depends=[]; }; + ffpe = derive2 { name="ffpe"; version="1.34.0"; sha256="1vwnzavj97af2cnr7hkmv4v4sqf1m8yw554dng1bfannfwym7584"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; }; + fgsea = derive2 { name="fgsea"; version="1.16.0"; sha256="0jmkkayabx3m0lyyc2mxd4vdvv7gv7fbk1r884gplnf2zgsx068n"; depends=[BH BiocParallel data_table fastmatch ggplot2 gridExtra Matrix Rcpp]; }; + fishpond = derive2 { name="fishpond"; version="1.6.0"; sha256="16alg6l5672v460f3s5lagcg67ji55lr5yhjhafpy59c39j76dkf"; depends=[abind gtools Matrix matrixStats qvalue Rcpp S4Vectors SummarizedExperiment svMisc]; }; + flagme = derive2 { name="flagme"; version="1.46.0"; sha256="1wjchjs11b7jgg196bxsq0irqh1ki7bhfzsma1qdm0d7mvmfnqjl"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; + flowAI = derive2 { name="flowAI"; version="1.20.1"; sha256="099mfm59vm0pfmap34lrgzy32046q8h9y3v30jzfq4zg5fjhcrb3"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 rmarkdown scales]; }; + flowBeads = derive2 { name="flowBeads"; version="1.28.0"; sha256="137pki1z0idd11kvlcgzjm6whi4qb29d211i450bp9fpw73x5ldg"; depends=[Biobase flowCore knitr rrcov xtable]; }; + flowBin = derive2 { name="flowBin"; version="1.26.0"; sha256="1awp9vnd7d95zkbm8pcrb6zmv98xdjjkjidmzjjc3v1kyasi2xqy"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; + flowCHIC = derive2 { name="flowCHIC"; version="1.24.0"; sha256="0pvscihas01p208p27zx3i74spmsv9c1jw2iawl9zj7fk2j1ikq3"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; + flowCL = derive2 { name="flowCL"; version="1.28.1"; sha256="1298gzhq4wc092mvrfksp48dpn4b6sak61hmq3pn1zxrvi8ldrz5"; depends=[graph Rgraphviz SPARQL]; }; + flowClean = derive2 { name="flowClean"; version="1.28.0"; sha256="0rvlh6w7dyj8psc3v4kqhgn6z2kp750fj8w5fqy6nzadrjwid9dw"; depends=[bit changepoint flowCore sfsmisc]; }; + flowClust = derive2 { name="flowClust"; version="3.28.0"; sha256="1ml3y5wq68jbyr7l5j4zs79bj5bbwzmn5gx41yi88hq78iwkscrq"; depends=[Biobase BiocGenerics clue corpcor ellipse flowCore flowViz graph mnormt]; }; + flowCore = derive2 { name="flowCore"; version="2.2.0"; sha256="001ickrl2asdl0zwpdjqkl1w7137nzxbryamxihgya394jw73xr8"; depends=[BH Biobase BiocGenerics cytolib matrixStats Rcpp RcppArmadillo RProtoBufLib S4Vectors]; }; + flowCut = derive2 { name="flowCut"; version="1.0.0"; sha256="1hg76nnils8pcgrwp9nqvv8zgj078lzyc1241afzqijlbs1d85sp"; depends=[Cairo e1071 flowCore flowDensity]; }; + flowCyBar = derive2 { name="flowCyBar"; version="1.26.0"; sha256="1k3h4gsvmvsr37l1qvvln7nfb36vw46dbk5fmhc8jc06d43yqmlk"; depends=[gplots vegan]; }; + flowDensity = derive2 { name="flowDensity"; version="1.24.0"; sha256="09f2fydrq40ygdspynvvk7m3c94659xk1v455ngqmc90gwpzayfa"; depends=[car flowCore flowViz flowWorkspace gplots RFOC rgeos sp]; }; + flowFP = derive2 { name="flowFP"; version="1.48.0"; sha256="1v11zk21kdfvylzk1cdizz0aqbwdf5s2l636lr741jnm2ibc55ig"; depends=[Biobase BiocGenerics flowCore flowViz]; }; + flowMap = derive2 { name="flowMap"; version="1.28.0"; sha256="0p364gwqqrsxkdlrszp5aq8n7hwjzc4lhflc7ck83fv0ws3w7pcq"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; + flowMatch = derive2 { name="flowMatch"; version="1.26.0"; sha256="0ssl5k515srjjpi996khnmyziy702z8q15x066ivlkpmdqv7rc0g"; depends=[Biobase flowCore Rcpp]; }; + flowMeans = derive2 { name="flowMeans"; version="1.50.0"; sha256="02y5b3iqjlqjlxrqq0l24dr68sjaniz26jqf14cnnwz1xg5hz734"; depends=[Biobase feature flowCore rrcov]; }; + flowMerge = derive2 { name="flowMerge"; version="2.38.0"; sha256="0xb9n8y6v7mc8hvsjbwrx43hj3h89vkf646aqyrfidjkdl2bci0n"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; + flowPeaks = derive2 { name="flowPeaks"; version="1.36.0"; sha256="1bx0pmm05jnp8r0cmqdkj8cvnn8x6q5jzf7pwvzid76lxj2pb8ig"; depends=[]; }; + flowPloidy = derive2 { name="flowPloidy"; version="1.16.0"; sha256="04a4z2llqsp3031kgiw550vz0id0v4jfrj2bxi5bgfx9jflswpn2"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; }; + flowPlots = derive2 { name="flowPlots"; version="1.38.0"; sha256="1p3zlqwfvcxiacjy5hp4ypj7hwzfswbwkvf7vkmzqd5ban0jwp1i"; depends=[]; }; + flowSpecs = derive2 { name="flowSpecs"; version="1.4.0"; sha256="0zjr5y3pa892ybf0zs3lcqxcvsgsvkp86fy9dlb53w24l84fnnm1"; depends=[Biobase BiocGenerics BiocParallel flowCore ggplot2 reshape2 zoo]; }; + flowSpy = derive2 { name="flowSpy"; version="1.4.0"; sha256="1kpndaj98gws89fifm7h809r59x1jprq0dm90bnk3z3k0gfvm2k7"; depends=[Biobase BiocNeighbors cluster destiny flowCore FlowSOM flowUtils ggplot2 gmodels igraph limma Matrix matrixStats mclust pheatmap prettydoc RANN Rcpp Rtsne scatterpie scatterplot3d stringr sva umap]; }; + flowStats = derive2 { name="flowStats"; version="4.2.0"; sha256="1i6nrwc55k4bn4qprgs6npy7wf8537m429yncqsygsv47z21ix6x"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow RColorBrewer rrcov]; }; + flowTime = derive2 { name="flowTime"; version="1.14.0"; sha256="1aay60king3ylbqx22kr7avsrcckb3qqx8rg4fsspa6mvdajnncg"; depends=[dplyr flowCore magrittr plyr rlang tibble]; }; + flowTrans = derive2 { name="flowTrans"; version="1.42.0"; sha256="0fiqgw9pf9gc88ghpg7dqj0l89f6cqrqaygbly7zi9ryxx00kyzm"; depends=[flowClust flowCore flowViz]; }; + flowUtils = derive2 { name="flowUtils"; version="1.54.0"; sha256="1q4g666nd51j24hcp2wxla1bdi77kbfd4i0pxgp7rs2jf7200k09"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; + flowVS = derive2 { name="flowVS"; version="1.22.4"; sha256="1w96hzaxa74kbybpz0pgz04napmgx997w9q5kjz8d0qb0893jzy2"; depends=[flowCore flowStats flowViz]; }; + flowViz = derive2 { name="flowViz"; version="1.54.0"; sha256="1s6jrn2a7hv984xvm6gyn8k3hnma8qidrw9kgj9z5128hv330z7k"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; + flowWorkspace = derive2 { name="flowWorkspace"; version="4.2.0"; sha256="19svh32jq1dpq3ayhpd5r8bw0iax8d9kdvpvc23gx2pf16g1j5ag"; depends=[aws_s3 aws_signature BH Biobase BiocGenerics cytolib data_table digest dplyr flowCore ggplot2 graph lattice latticeExtra matrixStats ncdfFlow RBGL Rcpp RcppArmadillo RcppParallel Rgraphviz Rhdf5lib RProtoBufLib scales XML]; }; + flowcatchR = derive2 { name="flowcatchR"; version="1.24.0"; sha256="10w9rhvdb0q8gm6lnwn137w89jaza4vd3y1fxph4ya8gqzxzi07h"; depends=[abind BiocParallel colorRamps EBImage plotly shiny]; }; + fmcsR = derive2 { name="fmcsR"; version="1.32.0"; sha256="1pqf3yp7v6qkdd3ja5kbzxnmb5sqcqjfmwx5sxj97lgnv9mwdv18"; depends=[BiocGenerics ChemmineR RUnit]; }; + fmrs = derive2 { name="fmrs"; version="1.0.0"; sha256="0pyxlld43jc2zk61k523vr40687bzpw45rd14qv05ar37lvaddrp"; depends=[survival]; }; + frenchFISH = derive2 { name="frenchFISH"; version="1.2.0"; sha256="1i89mf234dd9lzsizw6286111w0p3prsw7icrdr7lmrzcmacsrz0"; depends=[MCMCpack NHPoisson]; }; + frma = derive2 { name="frma"; version="1.42.0"; sha256="0dbv9gi8w1l1rlx1pzmrf7d63z9bhkcxx5j3fwzmq6iwji0ax2y7"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; + frmaTools = derive2 { name="frmaTools"; version="1.42.0"; sha256="0x3k4cnz322cncy9x622gjr24h8dwqq8fccn61yv3rwwpvcc0j50"; depends=[affy Biobase DBI preprocessCore]; }; + funtooNorm = derive2 { name="funtooNorm"; version="1.14.0"; sha256="1mibsxvsh52h70azwq219dsfsrcvqsdhm8hj4hysx65l3h4dpykx"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; }; + gCrisprTools = derive2 { name="gCrisprTools"; version="1.18.0"; sha256="0rwb0xa02wybblp2f7ncyrz46j8j6m83srn3p8bg4b1gxqgqddwq"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg SummarizedExperiment]; }; + gQTLBase = derive2 { name="gQTLBase"; version="1.21.1"; sha256="0nipibm1bk9k70ajbw1f6vjmz0dh7gk21l17q3m54bnawxsggrfh"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; + gQTLstats = derive2 { name="gQTLstats"; version="1.21.3"; sha256="1h78l23idf867djmdk97b02jxgmz4vfr2dai01fp648d0lsx5mkl"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr erma ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggbeeswarm ggplot2 gQTLBase HardyWeinberg Homo_sapiens IRanges limma mgcv plotly reshape2 S4Vectors shiny snpStats SummarizedExperiment VariantAnnotation]; }; + gaga = derive2 { name="gaga"; version="2.36.0"; sha256="0hnnf4nd9cgxs6kpncl9gf8vl18i5azn9fvcfvz8k5l0vlgj62xj"; depends=[Biobase coda EBarrays mgcv]; }; + gage = derive2 { name="gage"; version="2.40.2"; sha256="1bs0hx8sqiyl08dqn2zx31kbv5aci4xvrs71pplx2yxal3jf5178"; depends=[AnnotationDbi GO_db graph KEGGREST]; }; + gaggle = derive2 { name="gaggle"; version="1.58.0"; sha256="1q57ynviarp9v1d5w1gr32w6kzg838gjrrdvhcqz18ccciipqmxs"; depends=[graph rJava RUnit]; }; + gaia = derive2 { name="gaia"; version="2.34.0"; sha256="0815j2mjrvvzpgy2addjvy1sajwny9dvh9b6smsjkwlvpxdci3xv"; depends=[]; }; + garfield = derive2 { name="garfield"; version="1.18.0"; sha256="145xw1crgw599338xp32v3gwdn4kasx1w2k8gzcyb019iq2bdv6s"; depends=[]; }; + gcapc = derive2 { name="gcapc"; version="1.14.0"; sha256="1n42jyvx5vnyn1613nmz52kdlrxzp1q6jvlq7m8v2acp9811l2lc"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; }; + gcatest = derive2 { name="gcatest"; version="1.20.0"; sha256="0506rn47kfx6xvhjx4bs3p99svlm1lj0443r3qdr84z57q3ds5w5"; depends=[lfa]; }; + gcrma = derive2 { name="gcrma"; version="2.62.0"; sha256="1v1x13iwcv6c9x7r1iz2598rwlyzic67jbqcajg24ib6lcfn9f00"; depends=[affy affyio Biobase BiocManager Biostrings XVector]; }; + gdsfmt = derive2 { name="gdsfmt"; version="1.26.1"; sha256="0f5vn8h5fzzazcv92sgrf85hc4xkkizk2wwml9mzjd8ya2fkwg8n"; depends=[]; }; + geNetClassifier = derive2 { name="geNetClassifier"; version="1.30.0"; sha256="1ml2g1dgx195g3z14p9pp9vy8078wllww07g8grgfgdgv1x791sx"; depends=[Biobase e1071 EBarrays minet]; }; + gemini = derive2 { name="gemini"; version="1.4.0"; sha256="0k0zmnxqj3jm98i93ii86q650hmrd1mx510mj26632jqkni9wbqc"; depends=[dplyr ggplot2 magrittr mixtools pbmcapply scales]; }; + genArise = derive2 { name="genArise"; version="1.66.0"; sha256="0jficc4wwwkn0p05kskk8a1k1jjdfkyq7lgwxkpg0xzxkivnq3pa"; depends=[locfit tkrplot xtable]; }; + genbankr = derive2 { name="genbankr"; version="1.18.0"; sha256="0rmvff7fdn0476j42wv4n4qvdjarp6z7ip9wi1z990az9rxsyf6k"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; + geneAttribution = derive2 { name="geneAttribution"; version="1.16.0"; sha256="04bk9msibbm1iin3afxvmp6zfy10zv1q9wi1h2a24w4713f5qwn4"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; }; + geneClassifiers = derive2 { name="geneClassifiers"; version="1.14.0"; sha256="1x2sz4zr24vzkrwzjd2zm7xkmvpvzzsiwz0rjilds2n7iaflfb0y"; depends=[Biobase BiocGenerics]; }; + geneRecommender = derive2 { name="geneRecommender"; version="1.62.0"; sha256="1f3m524vib28c54n3kg382bab60if5jn3if9sysmbhd9k72cgflq"; depends=[Biobase]; }; + geneRxCluster = derive2 { name="geneRxCluster"; version="1.26.0"; sha256="0rm5yaf351ls8nbapppsd46mrlm02gdd0ryvc8vq98cbd6jixskp"; depends=[GenomicRanges IRanges]; }; + geneXtendeR = derive2 { name="geneXtendeR"; version="1.16.0"; sha256="1l9780sdr4xbwckiik75dsf4xqvcdkdmy35xiwy7f4f1202f005y"; depends=[AnnotationDbi BiocStyle data_table dplyr GO_db networkD3 org_Rn_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; }; + genefilter = derive2 { name="genefilter"; version="1.72.1"; sha256="1c6h3qnjvphs977qhv5vafvsb108r0q7xhaayly6qv6adqfn94rn"; depends=[annotate AnnotationDbi Biobase BiocGenerics survival]; }; + genefu = derive2 { name="genefu"; version="2.22.1"; sha256="1x461xa5xchl4mv9lbr8lcp62swdzphg0ga12sss4c0jqb67zrfy"; depends=[AIMS amap biomaRt iC10 impute limma mclust survcomp]; }; + geneplast = derive2 { name="geneplast"; version="1.16.0"; sha256="0dp2yg2jbiddpnbl8jmfas91n4mdbgip71v7lw68gbf4v6ig9n5d"; depends=[ape data_table igraph snow]; }; + geneplotter = derive2 { name="geneplotter"; version="1.68.0"; sha256="1f8nr60n1nig1gdy85wqdhpzxvp9r4chygxm8xpy882mdvfv6rqx"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; + genoCN = derive2 { name="genoCN"; version="1.42.0"; sha256="0jq7gmpm4ix5jdl11468cz33a42xlwxf5xxjbygfvg183gam0xx6"; depends=[]; }; + genomation = derive2 { name="genomation"; version="1.22.0"; sha256="1ana06irlpdgnmk8mb329nws9sm8n6max4qargf1xdcdf3rnk45g"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer RUnit S4Vectors seqPattern]; }; + genomeIntervals = derive2 { name="genomeIntervals"; version="1.46.0"; sha256="0jxgrad5nd9p4nzsib8g1p0vb86p1zwqfbhr2q984cbphjwhd8rn"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; + genomes = derive2 { name="genomes"; version="3.20.0"; sha256="04gks6km624ayyw8cfnakcm3bpnkc583mnma3h7rq0hszw22g1z9"; depends=[curl readr]; }; + genoset = derive2 { name="genoset"; version="1.45.1"; sha256="01iir5dpvakknizprpbgv48bdbij6cj09qf45jpshv1nl75l1mpa"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; + genotypeeval = derive2 { name="genotypeeval"; version="1.22.0"; sha256="12c4al49ka3mabwxs5rj043xwra556c9wanzqg2y52yhk0na7zlr"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; + genphen = derive2 { name="genphen"; version="1.18.0"; sha256="0cfhxgayaylgznw544z2j4wr9s9j8i27irr1r2cgjj6083p6hnvg"; depends=[Biostrings doParallel e1071 foreach ranger Rcpp rPref rstan]; }; + gep2pep = derive2 { name="gep2pep"; version="1.10.0"; sha256="13rq75y793bh9xwgr72jvr1q9bgl4bpbj02vc9rs4c9d55jr15lx"; depends=[Biobase digest foreach GSEABase iterators repo rhdf5 XML]; }; + gespeR = derive2 { name="gespeR"; version="1.22.0"; sha256="0ilahjwzv6fh0s36s4xwz5n2jhlzwdli6js07q5mk7xn50zfb3mr"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; + getDEE2 = derive2 { name="getDEE2"; version="1.0.0"; sha256="0yxnxbr7698j3r8vvkyx408x693c532lk114vynbc7p5x34q4w2k"; depends=[htm2txt SummarizedExperiment]; }; + ggbio = derive2 { name="ggbio"; version="1.38.0"; sha256="0vabil4jzrlv01aibqjhdkvrv2bf2kkpsidrkjj06isqr5fz54lw"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 rlang Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + ggcyto = derive2 { name="ggcyto"; version="1.18.0"; sha256="0myjvhm9jjb9cih5nlka3f9zg5ncy8gy3krpdpa0618jdglvgr1m"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra hexbin ncdfFlow plyr RColorBrewer rlang scales]; }; + ggtree = derive2 { name="ggtree"; version="2.4.2"; sha256="1y3bqg5w81v4mlzjpvwvkichm5klh2jzs3yb7nniqczmys8mb7ak"; depends=[ape aplot dplyr ggplot2 magrittr purrr rlang rvcheck scales tidyr tidytree treeio]; }; + ggtreeExtra = derive2 { name="ggtreeExtra"; version="1.0.4"; sha256="1ivh2lwwnhys64f9l98fi1h2m3pm556fvacqjdj3laz2wpdnakix"; depends=[ggnewscale ggplot2 rlang]; }; + girafe = derive2 { name="girafe"; version="1.42.0"; sha256="0j8bcbxs31mxn3lzdwjv9a1an4ydfk47y7c0dhk8k1d1rfr6k95l"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; + glmGamPoi = derive2 { name="glmGamPoi"; version="1.2.0"; sha256="0hj5k942anfbyhcrc7xgx824ppld1jb9r161bxal189xklxvh59s"; depends=[beachmat DelayedArray DelayedMatrixStats HDF5Array matrixStats Rcpp RcppArmadillo SummarizedExperiment]; }; + glmSparseNet = derive2 { name="glmSparseNet"; version="1.8.1"; sha256="09p4i2fcwn7wji7zmam0fv6bf3nvavy4lxhfch53wpwr06n4mdim"; depends=[biomaRt dplyr forcats futile_logger ggplot2 glmnet loose_rock Matrix MultiAssayExperiment readr reshape2 rlang sparsebn sparsebnUtils STRINGdb stringr SummarizedExperiment survminer]; }; + globalSeq = derive2 { name="globalSeq"; version="1.18.0"; sha256="0zy2z6h9cnz7a9dhxdn77fw6qpafp4zsxmbs9348xzh868a21gc4"; depends=[]; }; + globaltest = derive2 { name="globaltest"; version="5.44.0"; sha256="1kmxwhblyklsgvi4gx0r93rji5z4xmf76dabvbm87kvq4x831pf7"; depends=[annotate AnnotationDbi Biobase survival]; }; + gmapR = derive2 { name="gmapR"; version="1.32.0"; sha256="13p9dhyl7v71ac8j200y400rkylb787n9ahmgl9ir5dl4h7hwi9x"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + gmoviz = derive2 { name="gmoviz"; version="1.2.0"; sha256="1a7ffh12a4h91jzc0d15nplixnd1nsh9ms91m2nkbpmsmqip16qi"; depends=[BiocGenerics Biostrings circlize colorspace ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridBase IRanges pracma Rsamtools rtracklayer S4Vectors]; }; + goProfiles = derive2 { name="goProfiles"; version="1.52.0"; sha256="1dpa5kqyip8x920vr6vxbp22wydj96x5nzs99kh5y5jbdlch21b9"; depends=[AnnotationDbi Biobase CompQuadForm GO_db stringr]; }; + goSTAG = derive2 { name="goSTAG"; version="1.14.2"; sha256="061jb5fnyxxz18mjz25b4lf75izknsv42s4dngzd94fd85npbwvm"; depends=[AnnotationDbi biomaRt GO_db memoise]; }; + goTools = derive2 { name="goTools"; version="1.64.0"; sha256="0g3hrlpa7pswjxvn7b18pvzp0xvg0hgpav277zix5ix2lys00n6d"; depends=[AnnotationDbi GO_db]; }; + goseq = derive2 { name="goseq"; version="1.42.0"; sha256="18fs3m4kl3zahn42j20rjvxy83irscgqx0dvid7va4majvsib509"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; + gpart = derive2 { name="gpart"; version="1.8.0"; sha256="1ilrjypkh00n280rhg62v8g4msdz0i3ljxg4ggn1z2y9yy9472cc"; depends=[AnnotationDbi biomaRt data_table GenomicRanges Homo_sapiens igraph IRanges OrganismDbi Rcpp TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + gpls = derive2 { name="gpls"; version="1.62.0"; sha256="0zd5cdrpgk87fxqfxlady13k0kmvvbnwl8q2y84zypqwg6ra3x6b"; depends=[]; }; + gprege = derive2 { name="gprege"; version="1.34.0"; sha256="1jr9aqg0q47ijf75kjycfwk8vxi7dsaqc0z31aqrfv1zqak90sm0"; depends=[gptk]; }; + gpuMagic = derive2 { name="gpuMagic"; version="1.6.0"; sha256="0a08r223kci93ix7h8a01x6r419dd02768xcxs0k32127xm5bjqb"; depends=[BiocGenerics Deriv DescTools digest pryr Rcpp stringr]; }; + gramm4R = derive2 { name="gramm4R"; version="1.4.0"; sha256="1030f49x3hnsr98kjn0m348379yica04qn8r955wid3llyig0dhd"; depends=[basicTrendline DelayedArray investr minerva phyloseq psych SummarizedExperiment]; }; + graper = derive2 { name="graper"; version="1.6.0"; sha256="074b9cz30ip5lr6s35a1k9ig2x0wa46l7l50dbnhd55d9k4sdzwc"; depends=[BH cowplot ggplot2 Matrix matrixStats Rcpp RcppArmadillo]; }; + graph = derive2 { name="graph"; version="1.68.0"; sha256="0wr7j2pasvi3srvg9z3n034ljk8mldcixny6b3kmqbqm8dqy9py4"; depends=[BiocGenerics]; }; + graphite = derive2 { name="graphite"; version="1.36.0"; sha256="1ihza8m397qfvr79fhghs2knmw862hwz2akysy39r8hndv6lc7wk"; depends=[AnnotationDbi checkmate graph httr rappdirs]; }; + groHMM = derive2 { name="groHMM"; version="1.24.0"; sha256="08pap9wsaxl4jjlc1py0rc019gmi6daa0f9cr3ih1d97wybncanx"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; + gscreend = derive2 { name="gscreend"; version="1.4.0"; sha256="02rbw9akyxlccl11yzrfbl80qh49q2cksgbvbni125byrqzi6qlx"; depends=[BiocParallel fGarch nloptr SummarizedExperiment]; }; + gsean = derive2 { name="gsean"; version="1.10.1"; sha256="1k644gqvm0ijsm9gryrbji6wfd7lgbymlbvcjnvgzyyhajsp89hc"; depends=[fgsea PPInfer]; }; + gtrellis = derive2 { name="gtrellis"; version="1.22.0"; sha256="14mpavkxlp9d1kccwi4b9hi7x8md5j4s1g17ivqsj38lxqjvg5gw"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; + gwascat = derive2 { name="gwascat"; version="2.22.0"; sha256="1aqi1ny93virnzsxkh9ccx3mws70bgv0r8nwgla09vffb7f16nna"; depends=[AnnotationDbi BiocFileCache Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges readr S4Vectors snpStats VariantAnnotation]; }; + gwasurvivr = derive2 { name="gwasurvivr"; version="1.8.0"; sha256="1syvy64wwrbs2fifv6rdsnv5x7nvl2prgr2yd4dhv5yij62nb3l5"; depends=[GWASTools matrixStats SNPRelate SummarizedExperiment survival VariantAnnotation]; }; + h5vc = derive2 { name="h5vc"; version="2.24.0"; sha256="0hmphbg2wfa0f4dks9jfs5mlvc3a5pw5nypn4zzy21ia5n80didl"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rhtslib Rsamtools S4Vectors]; }; + hapFabia = derive2 { name="hapFabia"; version="1.32.0"; sha256="0zaynpv7wgc0s6x5ryq255w23n56jqqps95fcxr3n9l5p1v3j1js"; depends=[Biobase fabia]; }; + heatmaps = derive2 { name="heatmaps"; version="1.14.0"; sha256="0rmgk6wvz29qj98hfibgnmds6nbpqxqg1b55ffxksm3m86grkkq1"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; }; + hiAnnotator = derive2 { name="hiAnnotator"; version="1.24.0"; sha256="10phidg6nf9yzbm0ny66ls3fh01hh8mjb9srcwwxdhirlkdql79w"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; + hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.26.0"; sha256="1fjja3lmq1dkb077gddgh9zdcf23fzhj81g20x10gwv7swpph996"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl sonicLength]; }; + hierGWAS = derive2 { name="hierGWAS"; version="1.20.0"; sha256="0c44689s6zg045xxxz3jxb1r2xnqckc51kx1319r0m21k7rsz9z9"; depends=[fastcluster fmsb glmnet]; }; + hierinf = derive2 { name="hierinf"; version="1.8.0"; sha256="0j98b2vyax4hwyjdhm8a3asydrgh8af0gscxdbcr94f7pvx0frvy"; depends=[fmsb glmnet]; }; + hipathia = derive2 { name="hipathia"; version="2.6.0"; sha256="1ragg18k8zxzfpmpi1slgq9gvyvx6sq2n0zal8d8vrzpika07ig2"; depends=[AnnotationHub coin DelayedArray igraph limma matrixStats MultiAssayExperiment preprocessCore S4Vectors servr SummarizedExperiment]; }; + hmdbQuery = derive2 { name="hmdbQuery"; version="1.10.1"; sha256="1mymfd4rxv05a5x88wyva2h65hv91lv38s189cwdx6b19hh4dp3y"; depends=[S4Vectors XML]; }; + hopach = derive2 { name="hopach"; version="2.50.0"; sha256="0imj3nw3afffhh44a5d29c58rn573qylifjc2sqvxzmfxjraqnqd"; depends=[Biobase BiocGenerics cluster]; }; + hpar = derive2 { name="hpar"; version="1.32.1"; sha256="0h10b0fyblpsnxj60rpbk99z7snrkkb5jssmf0v27s6d445jq2zr"; depends=[]; }; + hummingbird = derive2 { name="hummingbird"; version="1.0.3"; sha256="0qa9xqcp7crb7hbprj8b5hn5nsli8xsvxn50mnmqxv23ifhpv5y0"; depends=[GenomicRanges IRanges Rcpp SummarizedExperiment]; }; + hypeR = derive2 { name="hypeR"; version="1.6.0"; sha256="0dic9pnv5w5m77arjh0j125mfyjvg69cpwlhrc5k7xjm97blxb87"; depends=[dplyr ggforce ggplot2 htmltools httr igraph kableExtra magrittr msigdbr openxlsx purrr R6 reactable reshape2 rlang rmarkdown scales shiny stringr visNetwork]; }; + hyperdraw = derive2 { name="hyperdraw"; version="1.42.0"; sha256="0z3a3lpz7s0fw023fxldkgxvl2dl1wn8agnyj09sky11ainxdayz"; depends=[graph hypergraph Rgraphviz]; }; + hypergraph = derive2 { name="hypergraph"; version="1.62.0"; sha256="1p5mzr2aiqqc1j2inh45abjvqhid9jqv6wiym1xxnz16mpaa7q97"; depends=[graph]; }; + iASeq = derive2 { name="iASeq"; version="1.34.0"; sha256="001s7z5b4wfaisbypnjzw457gxqga7w007kh0r3vx70cbk4a95qw"; depends=[]; }; + iBBiG = derive2 { name="iBBiG"; version="1.34.1"; sha256="15af5531lv4d2vq865p5d1lf530qxckzbkp2wnjx9xyix4vbyc4j"; depends=[ade4 biclust xtable]; }; + iBMQ = derive2 { name="iBMQ"; version="1.30.0"; sha256="1lzc1jrb8rscw59bzfyywcv80h291a3ahh6psnsx6471clvxfhvf"; depends=[Biobase ggplot2]; }; + iCARE = derive2 { name="iCARE"; version="1.18.0"; sha256="1pp1q0dyvwz39qrnwj3wq5263mvilgrzaxgx65ak3py7jcw7bjdl"; depends=[gtools Hmisc plotrix]; }; + iCNV = derive2 { name="iCNV"; version="1.10.0"; sha256="1dm5p4h479njf5pm1kkwk3cyg3x1h0kr70z9c7qnsjn0hm9gm1rr"; depends=[CODEX data_table dplyr fields ggplot2 rlang tidyr truncnorm]; }; + iCOBRA = derive2 { name="iCOBRA"; version="1.18.1"; sha256="183asczy9v2v1vrzxb7n7pa2yfzym3l24r3737k0jg6hnp2bpw50"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; }; + iCheck = derive2 { name="iCheck"; version="1.20.0"; sha256="1n883jksmwmvjjhwq7033p602fqfg6ggkbd0wr3417rnw865pjxs"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; }; + iChip = derive2 { name="iChip"; version="1.44.0"; sha256="13pjcc56hkgl9bd8qxhd8xbp5hirpkjwvi11f10wmmq50zpmw5ln"; depends=[limma]; }; + iClusterPlus = derive2 { name="iClusterPlus"; version="1.26.0"; sha256="02ji84dsbn4wir8sim4qy8h57524mnrsq51wxc7n8ybp5x7n9k9q"; depends=[]; }; + iGC = derive2 { name="iGC"; version="1.20.0"; sha256="0srf96yp3jp6p19a30kk8rbndgbxnar1skl5ssav3q94dk636gzm"; depends=[data_table plyr]; }; + iPAC = derive2 { name="iPAC"; version="1.34.0"; sha256="0lkqx26qs02fks9xvb3xll3qg6sk0kbhbqqpzprqdm76a2i4pxab"; depends=[Biostrings gdata multtest scatterplot3d]; }; + iSEE = derive2 { name="iSEE"; version="2.2.4"; sha256="04q13y3xbm0lz83apwfz2c54r91lfx69p722yw07p4hc9a1l6crh"; depends=[BiocGenerics circlize colourpicker ComplexHeatmap DT ggplot2 ggrepel igraph mgcv rintrojs S4Vectors shiny shinyAce shinydashboard shinyjs shinyWidgets SingleCellExperiment SummarizedExperiment vipor viridisLite]; }; + iSEEu = derive2 { name="iSEEu"; version="1.2.0"; sha256="1zprp7bkas2faraz44djjp8frg2v3gpcaxmw2zk3m1zfllar0dkg"; depends=[colourpicker DT ggplot2 iSEE S4Vectors shiny SingleCellExperiment SummarizedExperiment]; }; + iSeq = derive2 { name="iSeq"; version="1.42.0"; sha256="1553in9g15vycp4a50kgzs9m3zqi7ba6mjq1b32j5mzavmkb5hdn"; depends=[]; }; + iasva = derive2 { name="iasva"; version="1.8.0"; sha256="04g4nlznxfmqjnwywa3dxhii7hj1np8ck3j476kw1ac3lc78f8wj"; depends=[BiocParallel cluster irlba SummarizedExperiment]; }; + ibh = derive2 { name="ibh"; version="1.38.0"; sha256="1cpa60kkbj910fjn8fnchxkmaqa77475ayklvxapc82lfvjgx6n0"; depends=[simpIntLists]; }; + icetea = derive2 { name="icetea"; version="1.8.0"; sha256="14m5r6yffsryji17lyhh47217i2f3ii68bqkv6w25frxg1ny72ym"; depends=[BiocGenerics BiocParallel Biostrings csaw DESeq2 edgeR GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges limma Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm6_ensGene VariantAnnotation]; }; + ideal = derive2 { name="ideal"; version="1.14.0"; sha256="0x827s5p7rziynxkmq39h4hbk88wfjavjnjcysdwd9fy26yxja49"; depends=[AnnotationDbi base64enc BiocParallel DESeq2 dplyr DT GenomicRanges ggplot2 ggrepel GO_db goseq GOstats gplots heatmaply IHW IRanges knitr limma pcaExplorer pheatmap plotly rentrez rintrojs rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; }; + idiogram = derive2 { name="idiogram"; version="1.66.0"; sha256="0lwsjfmfgxlm1xg1a1wgcbahrr6wxl7lcfz8cf7rf3d6jxibjwp9"; depends=[annotate Biobase plotrix]; }; + idpr = derive2 { name="idpr"; version="1.0.007"; sha256="0m2lqzj7n597gpm7f59yjphvpazbxblrcs5xzgs0qd64155rsa8h"; depends=[Biostrings dplyr ggplot2 jsonlite magrittr plyr rlang]; }; + idr2d = derive2 { name="idr2d"; version="1.4.0"; sha256="03ha7lqkj2l0094pi1bakiwkckf5b5hd56ds1vsmjjyfmcg7gj1y"; depends=[dplyr futile_logger GenomeInfoDb GenomicRanges ggplot2 idr IRanges magrittr reticulate scales stringr]; }; + igvR = derive2 { name="igvR"; version="1.10.0"; sha256="1c0bfv5q48g7130l8dvq2l04h6xh6wayaygj07c9kyc6s4y47iwg"; depends=[BiocGenerics BrowserViz GenomicAlignments GenomicRanges httpuv MotifDb RColorBrewer rtracklayer seqLogo VariantAnnotation]; }; + illuminaio = derive2 { name="illuminaio"; version="0.32.0"; sha256="1yqm2fqw5ka7qywbal3p7axlwm1r0wibsr33n5xjma1dl9pi8fay"; depends=[base64]; }; + imageHTS = derive2 { name="imageHTS"; version="1.40.0"; sha256="0rcvkn4iam347nfqzw9bjxdbl4jvma18kpp46iwpfyagkdwv4jkv"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; + immunoClust = derive2 { name="immunoClust"; version="1.22.0"; sha256="0274gffghcfhmbqfnmlrib5lg58lzzrvchv4hlw1wj08yy0wr0x5"; depends=[flowCore lattice]; }; + impute = derive2 { name="impute"; version="1.64.0"; sha256="1pnjasw9i19nmxwjzrd9jbln31yc5jilfvwk414ya5zbqfsazvxa"; depends=[]; }; + infercnv = derive2 { name="infercnv"; version="1.6.0"; sha256="0m3fflxnxm0krvfknajijnsf685wl565m51wdxyq2n6ps0mwkqf4"; depends=[ape argparse BiocGenerics caTools coda coin digest doParallel dplyr edgeR fastcluster fitdistrplus foreach futile_logger future ggplot2 gplots gridExtra HiddenMarkov Matrix RColorBrewer reshape rjags SingleCellExperiment SummarizedExperiment tidyr]; }; + infinityFlow = derive2 { name="infinityFlow"; version="1.0.0"; sha256="1j3cadvcdjh1wgjj4da60szvy67sx67c456v7c23m8vv4jjrk521"; depends=[Biobase flowCore generics gtools matlab pbapply png raster uwot xgboost]; }; + intansv = derive2 { name="intansv"; version="1.30.0"; sha256="1jf4y53ay3dd36v43vr9w1jsifjz26qi7s124p0j431dqq23nm73"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; + interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.28.0"; sha256="0dq7z53fcknm4kf4ixm1h17f9l0iyz8ana491n6l6kr625gc7771"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; + interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.28.0"; sha256="08id2hkx4ssxj34dildx00a4j3z0nv171b7b0wl6xjks7wk6lv01"; depends=[BiocGenerics DT shiny]; }; + inveRsion = derive2 { name="inveRsion"; version="1.38.0"; sha256="04n756l7crplnnb0q13n3l5aa8bgjbsfi62gabm6f5ssv919zmf2"; depends=[haplo_stats]; }; + ipdDb = derive2 { name="ipdDb"; version="1.8.0"; sha256="1ns5ibl42pcpnfwaml3xbfxsfpfjggrpb804nvs1lr8fin5a3011"; depends=[AnnotationDbi AnnotationHub assertthat Biostrings DBI GenomicRanges IRanges RSQLite]; }; + isobar = derive2 { name="isobar"; version="1.36.0"; sha256="13jzd6d1s3y5bsgw9ln8vzig8jycbb8mrhjvp0gaccrnmdppdv0b"; depends=[Biobase biomaRt distr ggplot2 plyr]; }; + isomiRs = derive2 { name="isomiRs"; version="1.18.1"; sha256="0x890d34fmqvnjvrp7i8vhc2a4r10k7c6jbqadv55nnmmsg02dnc"; depends=[AnnotationDbi assertive_sets Biobase BiocGenerics broom cluster cowplot DEGreport DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges limma RColorBrewer readr reshape rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; }; + iterClust = derive2 { name="iterClust"; version="1.12.0"; sha256="0w7zy1zjrkpcd4l8ppw1kl1k46krchgllns3p4lv7c1nnsigmvvx"; depends=[Biobase cluster]; }; + iterativeBMA = derive2 { name="iterativeBMA"; version="1.48.0"; sha256="1kxsjz7y7rz8l2dzbx0laiqxk8426v6jn8hsqs961zbsdkinwfam"; depends=[Biobase BMA leaps]; }; + iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.48.0"; sha256="02bmmgr19zydgfdjzi8yy4vydhyg3ashws6zk595pl8c7yzxwx7x"; depends=[BMA leaps survival]; }; + iteremoval = derive2 { name="iteremoval"; version="1.10.0"; sha256="0264hiph3b9sqi46gikv16lkssiignb87pb955mqyrjrfn3yic57"; depends=[GenomicRanges ggplot2 magrittr SummarizedExperiment]; }; + ivygapSE = derive2 { name="ivygapSE"; version="1.12.0"; sha256="073a2vis058gk5kjmgnxzcwsm7hjqddplzz6zi15jijvb44f8ffa"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; }; + karyoploteR = derive2 { name="karyoploteR"; version="1.16.0"; sha256="1agw49mckm3g33igqdp9lr8a4ky8nhivaxrs7d00dvzk0diqwdb2"; depends=[AnnotationDbi bamsignals bezier biovizBase digest GenomeInfoDb GenomicFeatures GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + kebabs = derive2 { name="kebabs"; version="1.24.0"; sha256="1jx2j92wpnacf2ck2p4nb66vm925rj35bwjb8gayiwqwy3k5jr1y"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; + keggorthology = derive2 { name="keggorthology"; version="2.42.0"; sha256="09px6qv367q6ak1g0dyyybp5hm2xyi6ca81iyrsx086rsi1lq1ns"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; + kissDE = derive2 { name="kissDE"; version="1.10.0"; sha256="0vzn5p3fa9xgvn88h5940w7n04h925jxsp664madib30p0an2mvz"; depends=[aod Biobase DESeq2 doParallel DSS foreach ggplot2 gplots matrixStats]; }; + lapmix = derive2 { name="lapmix"; version="1.56.0"; sha256="04i13smb47a0pk8a6d4j86lz0pypbb7yvqi77rh5gz7b8kv1i3i2"; depends=[Biobase]; }; + ldblock = derive2 { name="ldblock"; version="1.20.0"; sha256="09i3ikv0axks9g842z1pjsc8x0fba51zyyc218h0bylbi1n9cdkm"; depends=[BiocGenerics EnsDb_Hsapiens_v75 ensembldb GenomeInfoDb GenomicFiles httr Matrix Rsamtools snpStats VariantAnnotation]; }; + lefser = derive2 { name="lefser"; version="1.0.0"; sha256="1pgh052grqc8yq2hkwrqikw99j8fb84p34i9806wxmfifn4cyks5"; depends=[coin ggplot2 MASS SummarizedExperiment]; }; + les = derive2 { name="les"; version="1.40.0"; sha256="0hriv16ig3r37mbs4hnc55ahhfzd47rh6cak6w8yq6w5h82kknrx"; depends=[boot fdrtool gplots RColorBrewer]; }; + levi = derive2 { name="levi"; version="1.8.0"; sha256="1ak8mhb38b82szb2pizffsl8wacxwgp68n2lcwl92r5n125jnbbh"; depends=[colorspace dplyr DT ggplot2 httr igraph knitr RColorBrewer Rcpp reshape2 shiny shinydashboard shinyjs testthat xml2]; }; + lfa = derive2 { name="lfa"; version="1.20.0"; sha256="0p72xz7sixinl48ijxx7z9n48h0r4zb7kdb3jp9z2k1v20z5cbpd"; depends=[corpcor]; }; + limma = derive2 { name="limma"; version="3.46.0"; sha256="1xxv493q1kip9bjfv7v7k5dnq7hz7gvl80i983v4mvwavhgnbxfz"; depends=[]; }; + limmaGUI = derive2 { name="limmaGUI"; version="1.66.0"; sha256="00bkd7j0ld6vmzaz08wv7s37j98ywbc1xlr14d276j7rbdsgi43w"; depends=[limma R2HTML tkrplot xtable]; }; + lionessR = derive2 { name="lionessR"; version="1.4.0"; sha256="1q8yj7svjrzksmqm1p2dkas2rcvy768djwpiq60y2p3gwjgx2p57"; depends=[S4Vectors SummarizedExperiment]; }; + lipidr = derive2 { name="lipidr"; version="2.4.0"; sha256="1m72kddill42kbd3h76rwasg6dkm8m2xh59mcnycxpyvlgn1d19g"; depends=[data_table dplyr fgsea forcats ggplot2 imputeLCMD limma magrittr rlang ropls S4Vectors SummarizedExperiment tidyr]; }; + lmdme = derive2 { name="lmdme"; version="1.32.0"; sha256="0nhjqlzlqxz9bgw3ssrkily3ckjxg3bmyhh4d1wi27k225rh4zl3"; depends=[limma pls stemHypoxia]; }; + loci2path = derive2 { name="loci2path"; version="1.10.0"; sha256="086rl1wgd7lwpzv3q3b96nc5ka4hnxys0qpfp8na4kla8xalaq9s"; depends=[BiocParallel data_table GenomicRanges pheatmap RColorBrewer S4Vectors wordcloud]; }; + logicFS = derive2 { name="logicFS"; version="2.10.0"; sha256="0hnmwg7x5s5nb38vicpm3fz9c9gk17r5s0r8h4xx9m78r8p1c6gc"; depends=[LogicReg mcbiopi survival]; }; + logitT = derive2 { name="logitT"; version="1.48.0"; sha256="0jvxq26pc91mnql1zafqifckn6sycdnhanp66xjsi25dxkz730bs"; depends=[affy]; }; + lpNet = derive2 { name="lpNet"; version="2.22.0"; sha256="197769b6jd512s135nmrgg2z4a441l48i36zgnvg3031cwy3pnws"; depends=[lpSolve]; }; + lpsymphony = derive2 { name="lpsymphony"; version="1.18.0"; sha256="0f9qjfv7rp1y3mwscnjz3pph7m40zgz55xcdhyii6k1iw2vyaxx9"; depends=[]; }; + lumi = derive2 { name="lumi"; version="2.42.0"; sha256="19asap8vhm3g8hyvpr8l7mw071dsa1d95wx46lh8m6achffngqv3"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; }; + mAPKL = derive2 { name="mAPKL"; version="1.20.0"; sha256="09i7hli37rdgv08dink458bwbij1fkab996dndkci4ijc318mfxd"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; }; + mBPCR = derive2 { name="mBPCR"; version="1.44.0"; sha256="06m6d6j0aiiiz6l8zkys38lbicki67agh8b3vha7lhff31qw6axz"; depends=[Biobase GWASTools oligoClasses]; }; + mCSEA = derive2 { name="mCSEA"; version="1.10.0"; sha256="0mpy365cf7pv2aap455yhb3hgp7qq5d8l3xg6lalqihxhhfdgrjr"; depends=[biomaRt fgsea GenomicFeatures GenomicRanges ggplot2 Gviz Homo_sapiens IRanges limma mCSEAdata S4Vectors SummarizedExperiment]; }; + maCorrPlot = derive2 { name="maCorrPlot"; version="1.60.0"; sha256="1wn62fggf31kpirkh4m38s6h751r3p8b26zsfh9kiii5myypic06"; depends=[lattice]; }; + maPredictDSC = derive2 { name="maPredictDSC"; version="1.28.0"; sha256="1fp73j2dinlpjhm03zjp85mnn0y425gr7fv0r713i0nzr5xgjfqz"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; + maSigPro = derive2 { name="maSigPro"; version="1.62.0"; sha256="1v7lp2hibg0mf5yn89k2wb1via8zbc33l6mzmfvfb78gc0b4n0nh"; depends=[Biobase MASS mclust venn]; }; + maanova = derive2 { name="maanova"; version="1.60.0"; sha256="11npi2vi4rs6g4zsws9p94s1racywxczmvaiyqslwqmqp7i1iqxm"; depends=[Biobase]; }; + macat = derive2 { name="macat"; version="1.64.0"; sha256="0bg9bryrrd1bhlhsax736js0xix39q6cabkdsgvjg6wns0l5j54j"; depends=[annotate Biobase]; }; + made4 = derive2 { name="made4"; version="1.64.0"; sha256="1lrxdm1b5a63iq4yif2rmp5jkw722fvqvgkqfw8miwlgi7zdb9j4"; depends=[ade4 Biobase gplots RColorBrewer scatterplot3d SummarizedExperiment]; }; + maftools = derive2 { name="maftools"; version="2.6.05"; sha256="0iqqmc8apmjkb91s0vnfxq6jcwipl1pvjlplzfzq5c52ybbjamlw"; depends=[data_table RColorBrewer survival]; }; + maigesPack = derive2 { name="maigesPack"; version="1.54.0"; sha256="1sfy9mq3ajbcbg0gqn5mj0jad3ajilpyfhapij8vs5nxq4slaxhg"; depends=[convert graph limma marray]; }; + makecdfenv = derive2 { name="makecdfenv"; version="1.66.0"; sha256="1kgrk07hkg67ppaw7dwzlrbhgs0i1zmy72pxmryw795xd1ca4lv3"; depends=[affy affyio Biobase zlibbioc]; }; + mapscape = derive2 { name="mapscape"; version="1.14.0"; sha256="1a65ww71mwz7njlf79a3grpa0185b4v0si7x1p9w4ygcdvw2xrpp"; depends=[base64enc htmlwidgets jsonlite stringr]; }; + marr = derive2 { name="marr"; version="1.00.03"; sha256="0vqqi27sbgjxhg1yrrkm1di58cvnlnjwp66ds5cad8f01523ijr0"; depends=[dplyr ggplot2 magrittr Rcpp rlang S4Vectors SummarizedExperiment]; }; + marray = derive2 { name="marray"; version="1.68.0"; sha256="1kkgv166gzvlj8p58vzam3hcaz8mypi3hhpdsjhaszwg6nav4ray"; depends=[limma]; }; + martini = derive2 { name="martini"; version="1.10.0"; sha256="1lf7bpqf3af1anfdl3l280wpscc4cj9nbppyj3j15r0dcn019rh5"; depends=[igraph Matrix Rcpp RcppEigen Rgin S4Vectors snpStats]; }; + maser = derive2 { name="maser"; version="1.8.0"; sha256="0c65f5szhifnhspi7grrvmimbyqmq0n8mjb3ghhafjxbnsgai1rk"; depends=[BiocGenerics data_table dplyr DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges reshape2 rtracklayer]; }; + maskBAD = derive2 { name="maskBAD"; version="1.34.0"; sha256="10pd8v4j2fqa5isa0brn0vp8b7w3z2rvxggzhl0myhz4p5f13s9a"; depends=[affy gcrma]; }; + massiR = derive2 { name="massiR"; version="1.26.0"; sha256="18jyqjynak42rqy5hg6i3fd6v22jfv3n290cd13jnw8dnfcys9sf"; depends=[Biobase cluster diptest gplots]; }; + matchBox = derive2 { name="matchBox"; version="1.32.0"; sha256="0bsbfqqgk83ijjkiy3rr35rh72iqgdpky79grqwlskx8y5194iy9"; depends=[]; }; + matter = derive2 { name="matter"; version="1.16.0"; sha256="07mdvgmxncdic5r4w5wp7l9fbby4xjq75kbagf9iy0aqcai78sjx"; depends=[biglm BiocGenerics BiocParallel digest irlba Matrix ProtGenerics]; }; + mbkmeans = derive2 { name="mbkmeans"; version="1.6.1"; sha256="0rc83mh9xzwczfn88j0xah86ldzi1kdfqgd938nj57ifx3zci4xh"; depends=[beachmat benchmarkme BiocParallel bluster ClusterR DelayedArray Matrix Rcpp RcppArmadillo Rhdf5lib S4Vectors SingleCellExperiment SummarizedExperiment]; }; + mcaGUI = derive2 { name="mcaGUI"; version="1.37.0"; sha256="08wqgaza58xh8b6zygdyjlp9g2lp0raf18hga7jyh9sjyp2hffq3"; depends=[bpca foreign lattice MASS OTUbase proto vegan]; }; + mdgsa = derive2 { name="mdgsa"; version="1.22.0"; sha256="1wdvyz0k9basd5ns9bkac38hd23nx6qrppw3vk7k5vlv82pmhdzj"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; }; + mdp = derive2 { name="mdp"; version="1.10.0"; sha256="122w6139ykhavxnckgvwmabm3cay429vnhjszb5qvd7xjskzm8zc"; depends=[ggplot2 gridExtra]; }; + mdqc = derive2 { name="mdqc"; version="1.52.0"; sha256="1c30d84xgizw9k91wdyd9b79jacvv8wi2fxm51qr29ggk0lax07x"; depends=[cluster MASS]; }; + megadepth = derive2 { name="megadepth"; version="1.0.3"; sha256="1mdg2c6cdfr8n3hxw44vmdpp4zhs77mw3kj6rahadmbrg2qhkm21"; depends=[cmdfun fs GenomicRanges readr xfun]; }; + meshes = derive2 { name="meshes"; version="1.16.0"; sha256="1xqp4mll566p7jaxbc7rqirw700hfgfvsdvkv0d6d201ngvaql4j"; depends=[AnnotationDbi DOSE enrichplot GOSemSim MeSH_db rvcheck]; }; + meshr = derive2 { name="meshr"; version="1.26.0"; sha256="0ip1xlmak344f4sxxiarfvypib465zmzc3axl3672g1x5q6ghm9z"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db RSQLite S4Vectors]; }; + messina = derive2 { name="messina"; version="1.26.0"; sha256="1q8kka7a9mycamcp8k0zf6mgh3y7aqb055w601gg92qm7h27bf84"; depends=[foreach ggplot2 plyr Rcpp survival]; }; + metaCCA = derive2 { name="metaCCA"; version="1.18.0"; sha256="1if8wqxvhc9kqrnx00pn69fsp1wswi9p20d61ngkyzd0csnvaslc"; depends=[]; }; + metaMS = derive2 { name="metaMS"; version="1.26.0"; sha256="01bzbrfy57pbhqxx4zsdrzwzpq29w0k7pvww8c7ffgds5gfpqn64"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; + metaSeq = derive2 { name="metaSeq"; version="1.30.0"; sha256="00s7c7mykvxib8j6v9zw53zcb8hxg1qqnd5gkiaq1s56hwyzf8sf"; depends=[NOISeq Rcpp snow]; }; + metabCombiner = derive2 { name="metabCombiner"; version="1.0.1"; sha256="1zy14xq3spk9s5zvsgkx8nllkiiklgn57dvvr0k0v153ash99v2r"; depends=[caret dplyr matrixStats mgcv rlang S4Vectors]; }; + metabolomicsWorkbenchR = derive2 { name="metabolomicsWorkbenchR"; version="1.0.0"; sha256="0iygahq0nv9klm2f1wwfszhjg21x0360l05whzkgsxkq2hkpvl25"; depends=[data_table httr jsonlite MultiAssayExperiment struct SummarizedExperiment]; }; + metabomxtr = derive2 { name="metabomxtr"; version="1.24.0"; sha256="1n64mqjlb0awakzdbgi2nl7miar4shnh7jgpkpka7rcxa6r9j88s"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; }; + metagene = derive2 { name="metagene"; version="2.22.0"; sha256="1w4jgkp8sbc6digi1paynzcan89q15jwvcsr015i53ls712dbc3d"; depends=[BiocParallel data_table DBChIP EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats muStat purrr R6 Rsamtools rtracklayer stringr]; }; + metagene2 = derive2 { name="metagene2"; version="1.6.1"; sha256="09m7w6r5689121njzqvfci4yzrrjl0hzmjz27926fly9m7znmfi8"; depends=[BiocParallel data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr purrr R6 reshape2 Rsamtools rtracklayer]; }; + metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="2.10.0"; sha256="1mm96910idw3y0bcq8a7s0q40ar0l2l10jdz5al8ws9b899mw078"; depends=[ape Biobase Biostrings dbplyr DECIPHER dplyr lattice lazyeval magrittr RSQLite S4Vectors stringr]; }; + metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.32.0"; sha256="1wrn8bmf7a00zfdi6n4dhdf7qy05023jcwrcf9j3f0nkkk8p0snx"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer Wrench]; }; + metahdep = derive2 { name="metahdep"; version="1.48.0"; sha256="1frsibj5zzg7g35nxmrqvpxvniyss9155xrvjdb54zbzzvc3hbkf"; depends=[]; }; + metaseqR = derive2 { name="metaseqR"; version="1.30.0"; sha256="0p566nbwhq4k41yqnb94mgyhcsf4cd1mdqc3fpfsafivzdmmdi3v"; depends=[baySeq biomaRt brew corrplot EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; + metaseqR2 = derive2 { name="metaseqR2"; version="1.2.0"; sha256="1kkyn2p16rw83gz1rxldrdyrz2xbbn1w1809bnkyhfzv2czfx276"; depends=[ABSSeq baySeq Biobase BiocGenerics BiocParallel biomaRt Biostrings corrplot DESeq2 DSS DT EDASeq edgeR genefilter GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gplots harmonicmeanp heatmaply htmltools httr IRanges jsonlite lattice limma locfit log4r magrittr MASS Matrix NBPSeq pander qvalue rmarkdown rmdformats Rsamtools RSQLite rtracklayer S4Vectors stringr SummarizedExperiment survcomp VennDiagram vsn yaml zoo]; }; + metavizr = derive2 { name="metavizr"; version="1.14.0"; sha256="1rffsyx2ybnqyy1n050qf8pycs7241qzi4qayv91jl4nfy01yry3"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; }; + methInheritSim = derive2 { name="methInheritSim"; version="1.12.0"; sha256="1r256c724qsp9cpz91jp0n1yys2m33z053zqrdrrcj55d9fgy10a"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; }; + methimpute = derive2 { name="methimpute"; version="1.12.0"; sha256="1pi1py9c1v3j092lnhxqw7l8m8gk24rrdpdipd4qs32r40q004g1"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; }; + methrix = derive2 { name="methrix"; version="1.4.07"; sha256="1pc2blyk6bp2sawnsrhq0zg8xws40symnlycxif451jrs00bh47f"; depends=[BSgenome data_table DelayedArray DelayedMatrixStats GenomicRanges ggplot2 HDF5Array IRanges matrixStats rtracklayer SummarizedExperiment]; }; + methyAnalysis = derive2 { name="methyAnalysis"; version="1.32.0"; sha256="0vcri6aw2h14bd4cjwxy3wcw03fa8mgyl4gfxfbd32mf5pajag73"; depends=[annotate AnnotationDbi bigmemoryExtras Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; }; + methylCC = derive2 { name="methylCC"; version="1.4.0"; sha256="0m5sx3y9dlna8zj0b7y7k2c5nf6fljlvlr8qazv65s9kls7r7fpq"; depends=[Biobase bsseq bumphunter dplyr FlowSorted_Blood_450k genefilter GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IRanges magrittr minfi plyranges quadprog S4Vectors]; }; + methylGSA = derive2 { name="methylGSA"; version="1.8.0"; sha256="03r9v1pms48gsz5xvv5swdklqwpfm3zd41xrfnsr2z9im6pa5zjx"; depends=[AnnotationDbi BiocParallel clusterProfiler ggplot2 GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 missMethyl org_Hs_eg_db reactome_db RobustRankAggreg shiny stringr]; }; + methylInheritance = derive2 { name="methylInheritance"; version="1.14.0"; sha256="1yvzkyf786sr66cmmi1ppiic6423dqan9s7dj1lkylh70ppdrzj2"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; }; + methylKit = derive2 { name="methylKit"; version="1.16.1"; sha256="1c9b11gfh3cc37iwym9rgsba3mh2xkp78a1gvnjqhzlkiz667mn3"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust mgcv qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; }; + methylMnM = derive2 { name="methylMnM"; version="1.28.0"; sha256="0lw42glifhgmk34ai1mny0kkjjspgzwgcrvra71cmmla8q9958yf"; depends=[edgeR statmod]; }; + methylPipe = derive2 { name="methylPipe"; version="1.24.0"; sha256="1gvr816lng10ypg5rg2gb9a76hiymmpqlpnwg5jalzwdqr9h0ys3"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; + methylSig = derive2 { name="methylSig"; version="1.2.0"; sha256="023wk4n3ibyk5lrypq1msk48r4kpqp774w0xpvdbpff90gr75na6"; depends=[bsseq DelayedArray DelayedMatrixStats DSS GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + methylumi = derive2 { name="methylumi"; version="2.36.0"; sha256="00w5affxzirf6ffiznk33papwwvwsk2zgy6xvsx7iaf5kvnak2nh"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; + methyvim = derive2 { name="methyvim"; version="1.11.0"; sha256="0p80il20cqybalrbp34ryzys5avcsnfg1sgz91wpmfkmkcwj88bf"; depends=[BiocGenerics BiocParallel bumphunter cluster doFuture dplyr future GenomeInfoDb ggplot2 ggsci gridExtra gtools IRanges limma minfi S4Vectors SummarizedExperiment superheat tmle]; }; + mfa = derive2 { name="mfa"; version="1.12.0"; sha256="0rvyqh9rnhlxhsh7sq6mx6ppjk0d19kvx3azsfs1qpgnb0vvdyab"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; }; + mgsa = derive2 { name="mgsa"; version="1.38.0"; sha256="1gi8rbgq95wgxpg0wyh7v74nni8fm10mc3y7f978203bj8slh7l0"; depends=[gplots]; }; + miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.14.0"; sha256="0n6mi1ksq72g6zjaxiis59qj0j8hbn98lcilhfr4ak1jyv9wjp7y"; depends=[]; }; + miRLAB = derive2 { name="miRLAB"; version="1.20.0"; sha256="095cq4555jgs8ngwfpjhni0khaaspgd8vnafy5sif876ff454d06"; depends=[Category ctc dplyr energy entropy glmnet GOstats gplots Hmisc httr impute InvariantCausalPrediction limma org_Hs_eg_db pcalg RCurl stringr SummarizedExperiment TCGAbiolinks]; }; + miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.18.0"; sha256="0i7b1g8hfbv22nzlhazc3l9hwknr439ljppqpab3464r9nqv0h7j"; depends=[AnnotationDbi DBI miRBaseVersions_db reshape2]; }; + miRNApath = derive2 { name="miRNApath"; version="1.50.0"; sha256="11b4rdg5pva0wcv18gmv2r8af8p26yvzs6fpl35lycmfra7982fh"; depends=[]; }; + miRNAtap = derive2 { name="miRNAtap"; version="1.24.0"; sha256="0335qmcr016jky6n8rn5wzf3zw5yr6fibfk250cps12kqc5zz9ac"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; + miRSM = derive2 { name="miRSM"; version="1.8.4"; sha256="14diqd7akv7a2l9ixr3vg4xpfpan3ffd21bxqf6fdaf59ak3142a"; depends=[BiBitR BicARE biclust Biobase dbscan dynamicTreeCut energy fabia flashClust GFA GSEABase iBBiG igraph isa2 linkcomm MatrixCorrelation MCL mclust miRspongeR NMF org_Hs_eg_db PMA ppclust Rcpp rqubic s4vd SOMbrero subspace SummarizedExperiment WGCNA]; }; + miRcomp = derive2 { name="miRcomp"; version="1.20.0"; sha256="1hdadldl0kj5fhz5r6was8sx9snqfld4yca8r9aqzj0gzgq7didg"; depends=[Biobase KernSmooth miRcompData]; }; + miRmine = derive2 { name="miRmine"; version="1.12.0"; sha256="0izjw5qimf1avfv1lacghvxr62xmnq12g01x8bg0886gw389d68i"; depends=[SummarizedExperiment]; }; + miRspongeR = derive2 { name="miRspongeR"; version="1.16.2"; sha256="0x7ws1z5sgg3xchm80k05ah9pzmgx8b74lh4ylpgnb6lbjlkhvk7"; depends=[clusterProfiler corpcor DOSE igraph linkcomm MCL org_Hs_eg_db Rcpp ReactomePA survival varhandle]; }; + microRNA = derive2 { name="microRNA"; version="1.48.0"; sha256="1nspsy9snabvsw0w0ssl6qawghnnff5924yvvgj9mrqkpkx9jd55"; depends=[Biostrings]; }; + microbiome = derive2 { name="microbiome"; version="1.12.0"; sha256="1w4ymbawdmqm1icfk9zvbgsnp5rr9h9p3x10p0ymipngw043hr3x"; depends=[dplyr ggplot2 phyloseq reshape2 Rtsne scales tibble tidyr vegan]; }; + microbiomeDASim = derive2 { name="microbiomeDASim"; version="1.4.0"; sha256="0z5y12p6ff6i137cynd1188yrp4v6rq7b2vd82059awijji925a2"; depends=[Biobase ggplot2 MASS Matrix metagenomeSeq mvtnorm pbapply phyloseq tmvtnorm]; }; + microbiomeExplorer = derive2 { name="microbiomeExplorer"; version="1.0.1"; sha256="1x39gm9a6lsazsxwyd7aizg0qknsvd4mpim6pasyahnclkqcsksv"; depends=[Biobase biomformat broom car DESeq2 dplyr DT forcats heatmaply knitr limma lubridate magrittr matrixStats metagenomeSeq plotly RColorBrewer readr reshape2 rlang rmarkdown shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringr tibble tidyr vegan]; }; + mimager = derive2 { name="mimager"; version="1.14.0"; sha256="198abvha081v20xggwvvscmpwgpzbj55x7fvxhxqx103zmblbqcs"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; }; + minet = derive2 { name="minet"; version="3.48.0"; sha256="1mg9zkp26k9yxcl8bljib3s7fl2kzi8qyyh7pyfl6zixl8d05ayd"; depends=[infotheo]; }; + minfi = derive2 { name="minfi"; version="1.36.0"; sha256="1x3ksp6syl54hds7wgm4p9yj4mznhhhhk20ijn3i2jc3k8xqcqfi"; depends=[beanplot Biobase BiocGenerics BiocParallel Biostrings bumphunter data_table DelayedArray DelayedMatrixStats genefilter GenomeInfoDb GenomicRanges GEOquery HDF5Array illuminaio IRanges lattice limma MASS mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; + mirIntegrator = derive2 { name="mirIntegrator"; version="1.20.0"; sha256="07f47ynjv8psh9i17h23j09611cd6wj585mkhd1vf77f7np0islm"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; + missMethyl = derive2 { name="missMethyl"; version="1.24.0"; sha256="0ddnygmhli30l8vbxj9g4q4dn2igcs9zcwl9ngq63n034n53wi75"; depends=[AnnotationDbi BiasedUrn Biobase BiocGenerics GenomicRanges GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest IRanges limma methylumi minfi org_Hs_eg_db ruv S4Vectors statmod stringr SummarizedExperiment]; }; + missRows = derive2 { name="missRows"; version="1.10.0"; sha256="1q3jn21aim4l9hcsq9wn64p7dxd0ankcnjyava8gm2s3zkv268zc"; depends=[ggplot2 gtools MultiAssayExperiment plyr S4Vectors]; }; + mitch = derive2 { name="mitch"; version="1.2.2"; sha256="0dqa3fkmh07gdaijfgg2rgrvr83iyr6k1vfyxn0wbdmza3k553vi"; depends=[beeswarm echarts4r GGally ggplot2 gplots gridExtra knitr MASS plyr reshape2 rmarkdown]; }; + mixOmics = derive2 { name="mixOmics"; version="6.14.1"; sha256="07d1z33bc3bym1jwp1qqfhs18w4v9axk0ycnmldmj6piswvp44wk"; depends=[BiocParallel corpcor dplyr ellipse ggplot2 ggrepel gridExtra igraph lattice MASS matrixStats rARPACK RColorBrewer reshape2 tidyr]; }; + mnem = derive2 { name="mnem"; version="1.6.5"; sha256="1vbsqzdlqnbs6091537gcp7v3kra4lk8gcwf1fy8w3m6kvb07bpd"; depends=[cluster data_table e1071 flexclust graph lattice Linnorm matrixStats naturalsort Rcpp RcppEigen Rgraphviz snowfall tsne]; }; + mogsa = derive2 { name="mogsa"; version="1.24.0"; sha256="0rngax9rrwr7b9xqbpi5b982q1p68rnl2pyc39jwjnagpbf1yak7"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; + monocle = derive2 { name="monocle"; version="2.18.0"; sha256="1k3hwi9aspjy75arigg7i1w7ygf112y12cndibf2bhpz2phzwslx"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; }; + mosaics = derive2 { name="mosaics"; version="2.28.0"; sha256="06z2dslp2vp9dc30nk0b28fiq17g7ws7q8ri4r2f6f5rgmjj199q"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; + motifStack = derive2 { name="motifStack"; version="1.34.0"; sha256="1psqpdbgbad31bd8hg5bl62qi5s9rl75nzm85igfpxar3zwwxjlb"; depends=[ade4 Biostrings ggplot2 htmlwidgets XML]; }; + motifbreakR = derive2 { name="motifbreakR"; version="2.4.0"; sha256="0nni6i7h51kz0ch8ls9c9jzd7fjmc9wsavp11hx6w6bmhnh3k4n7"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr SummarizedExperiment TFMPvalue VariantAnnotation]; }; + motifcounter = derive2 { name="motifcounter"; version="1.14.0"; sha256="0rizspp50wzwbr3ds8vfaxbv3lxkjp3v4p5r7ka9bjfg1g36hkwj"; depends=[Biostrings]; }; + motifmatchr = derive2 { name="motifmatchr"; version="1.12.0"; sha256="0zrpn0hqdg0hm80ydkfpiqncwyb8y0xp6mlin7g955p8zcpcm67z"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; }; + mpra = derive2 { name="mpra"; version="1.12.1"; sha256="08fiyzf7l9859mvd9y2gixhq4xds6gddpfsw1v7knb9dlvad92wy"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; }; + msImpute = derive2 { name="msImpute"; version="1.0.0"; sha256="17kdr0k750w93appcxmxd2864znp5zkk07di9w57vf0zq56mqxb7"; depends=[data_table FNN limma matrixStats mvtnorm pdist rdetools reticulate scran softImpute]; }; + msPurity = derive2 { name="msPurity"; version="1.16.2"; sha256="1ypcbpda2na186bxs5l15v6jc12x1kn382aad9s10270hnvfi3xg"; depends=[DBI dbplyr doSNOW dplyr fastcluster foreach ggplot2 jsonlite magrittr mzR plyr Rcpp reshape2 RSQLite stringr uuid]; }; + msa = derive2 { name="msa"; version="1.22.0"; sha256="0d29gia3b453q9v30hxr1s57j28cig8pp81syxc07ycn2rqg020d"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; + msgbsR = derive2 { name="msgbsR"; version="1.14.0"; sha256="00w8isy6sx8knjzk8rz4qlfd5xw8mw38ylj8sa67xc7g83va7br8"; depends=[BSgenome edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; }; + msmsEDA = derive2 { name="msmsEDA"; version="1.28.0"; sha256="1llmy8msxmrqik3s3439wffma1662vwvvcaz8q0a4g5ridkmdbrx"; depends=[gplots MASS MSnbase RColorBrewer]; }; + msmsTests = derive2 { name="msmsTests"; version="1.28.0"; sha256="1zsnmzj1qvjdwz7mwg9wrsk5iskpqs0f6jccqn8mxy9dgkskmp0j"; depends=[edgeR msmsEDA MSnbase qvalue]; }; + multiClust = derive2 { name="multiClust"; version="1.20.0"; sha256="0q10z7v1dy3swcc3nfi6lw5z3730fpy7drjgy1v7r26wwl852kws"; depends=[amap cluster ctc dendextend mclust survival]; }; + multiGSEA = derive2 { name="multiGSEA"; version="1.0.2"; sha256="0kff4b71qw1zz80wg5f9w3lcs7z8cjax9w2bd2848q2mqi15pvdf"; depends=[AnnotationDbi dplyr fgsea graphite magrittr metap rappdirs rlang]; }; + multiHiCcompare = derive2 { name="multiHiCcompare"; version="1.8.0"; sha256="0bgd6xmzbw8dbpj6a2f83cynl8lg8cki7v1vp7rx089x79x35vvy"; depends=[BiocParallel BLMA data_table dplyr edgeR GenomeInfoDb GenomeInfoDbData GenomicRanges HiCcompare metap pbapply pheatmap qqman]; }; + multiMiR = derive2 { name="multiMiR"; version="1.12.0"; sha256="06i77z13ss9sp1l7lww8j3n586kp69rlj6q8yyb29ajjin099y5i"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; }; + multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.14.0"; sha256="0d7c6db2fhhh1r6lkj3fprvvl3dkzvmbw49qx5djmsp7lzcy13bv"; depends=[doParallel foreach SummarizedExperiment]; }; + multicrispr = derive2 { name="multicrispr"; version="1.0.0"; sha256="0h3y3fiqrc6bvg2826ys6mcdc2ni0z9b90yh60j0f6yj8cmvqmj9"; depends=[assertive BiocGenerics Biostrings BSgenome CRISPRseek data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 karyoploteR magrittr plyranges Rbowtie reticulate rtracklayer stringi tidyr tidyselect]; }; + multiscan = derive2 { name="multiscan"; version="1.50.0"; sha256="1zci3xy3m4jzlvznx8vly2pz0ji17iwa2r1d935c8l6zrkj5n175"; depends=[Biobase]; }; + multtest = derive2 { name="multtest"; version="2.46.0"; sha256="06vixd81nh3nxrc6km73p7c4bwln1zm39fa9gp7gj272vsxkx53q"; depends=[Biobase BiocGenerics MASS survival]; }; + muscat = derive2 { name="muscat"; version="1.4.0"; sha256="1gsj15pqvnpkhw38yiaq9ffn7i27fzayml2n74ccaxs9c78na6w7"; depends=[BiocParallel blme ComplexHeatmap data_table DESeq2 dplyr edgeR ggplot2 glmmTMB limma lme4 lmerTest Matrix matrixStats progress purrr S4Vectors scales scater sctransform SingleCellExperiment SummarizedExperiment variancePartition viridis]; }; + muscle = derive2 { name="muscle"; version="3.32.0"; sha256="09dhq5x9bk89z4zd8zbx8s6mrzm01kwlxijpw525lx9i5zbi68pj"; depends=[Biostrings]; }; + musicatk = derive2 { name="musicatk"; version="1.0.0"; sha256="1v9r4k2kjcr1avn9r1d2l8mxm1m127qpf2sj8dd3gclj712hd92b"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 BSgenome_Mmusculus_UCSC_mm9 cowplot data_table decompTumor2Sig deconstructSigs dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel gridExtra gtools IRanges maftools magrittr MCMCprecision NMF plotly rlang S4Vectors stringr SummarizedExperiment tibble tidyr topicmodels TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene uwot VariantAnnotation withr]; }; + mygene = derive2 { name="mygene"; version="1.26.0"; sha256="0giaca4yayz0dapzy80n640qpqhg0v09cxh5v89avb5gz5gqmfnq"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; + myvariant = derive2 { name="myvariant"; version="1.20.0"; sha256="1dj29iz6058pwyvay40n7qhpww5j1397sg5gwrggsr8yxhzgpyvb"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; + mzID = derive2 { name="mzID"; version="1.28.0"; sha256="0s7d6cz1li7v3ni6n6hrdspl93yiyr283kmbbd3hhkfgzgx6kpq2"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; + mzR = derive2 { name="mzR"; version="2.24.1"; sha256="0ik0yrjhvk8r5pm990chn2aadp0gqzzkkm0027682ky34xp142sg"; depends=[Biobase BiocGenerics ncdf4 ProtGenerics Rcpp Rhdf5lib zlibbioc]; }; + nanotatoR = derive2 { name="nanotatoR"; version="1.6.0"; sha256="1li86lgfsky71hi1c02nqz6pk76rd8w1b57iz34c0799xqgq2m7p"; depends=[AnnotationDbi hash httr knitr openxlsx org_Hs_eg_db rentrez rtracklayer stringr testthat]; }; + ncGTW = derive2 { name="ncGTW"; version="1.4.0"; sha256="1v7pzd6n2sc9arn2qq4s9081ha8i9qzsyidzfkmfcc3n175c041q"; depends=[BiocParallel Rcpp xcms]; }; + ncRNAtools = derive2 { name="ncRNAtools"; version="1.0.0"; sha256="11k7pnqd4cjp2jin2ivbkzxk9wzcp1zj6i4c8wdvfwdh27djcqyk"; depends=[GenomicRanges ggplot2 httr IRanges S4Vectors xml2]; }; + ncdfFlow = derive2 { name="ncdfFlow"; version="2.36.0"; sha256="1knqc3ic2vpck7n7m7adxjz3ac70ra89d5gvlgp9r2q3kgaciwac"; depends=[BH Biobase BiocGenerics flowCore Rcpp RcppArmadillo Rhdf5lib zlibbioc]; }; + ndexr = derive2 { name="ndexr"; version="1.12.1"; sha256="1vm0j12jdz3jnjs1v7frk82wyaczag9rlgs5i9ms6g6fbxbfg7yl"; depends=[httr igraph jsonlite plyr tidyr]; }; + nearBynding = derive2 { name="nearBynding"; version="1.0.0"; sha256="0ccyhg2ac6ayqs5v76qjhgf6v3bkqwkqkm0vmqw8gxk2yj6sfkif"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicRanges ggplot2 gplots magrittr matrixStats plyranges R_utils rlang Rsamtools rtracklayer S4Vectors transport TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + netDx = derive2 { name="netDx"; version="1.2.2"; sha256="1z0if5w3lazx34c86pla4lng18zz2xzciypsm41kii767g1xz1sd"; depends=[bigmemory BiocFileCache clusterExperiment combinat doParallel foreach GenomeInfoDb GenomicRanges ggplot2 glmnet httr igraph IRanges MultiAssayExperiment netSmooth pracma rappdirs RColorBrewer RCy3 reshape2 ROCR Rtsne S4Vectors scater]; }; + netReg = derive2 { name="netReg"; version="1.14.0"; sha256="0xchwacz12pfwr8rvlb51m2fnbf6611j0k892lkj0bqmz6xkvlzj"; depends=[nloptr Rcpp RcppArmadillo reticulate tensorflow tfprobability]; }; + netSmooth = derive2 { name="netSmooth"; version="1.10.0"; sha256="0gk9csmjjszy3ygm9vfjah9f5a8j7n3m4bgnc5smfl3ycrfbnjdi"; depends=[cluster clusterExperiment data_table DelayedArray entropy HDF5Array Matrix scater SingleCellExperiment SummarizedExperiment]; }; + netbiov = derive2 { name="netbiov"; version="1.24.0"; sha256="123244n6x2i5769jykn3pvyhxg11lqcc0i3sd8c1hjg5ghpx8w0m"; depends=[igraph]; }; + netboost = derive2 { name="netboost"; version="1.6.0"; sha256="0sc1b672077dcdswl0hwdl6k603xfmiwhkymwzmdgr7f1ln3rg1n"; depends=[colorspace dynamicTreeCut impute R_utils Rcpp RcppParallel WGCNA]; }; + netboxr = derive2 { name="netboxr"; version="1.2.0"; sha256="01ajvpi7xmqawvi56k6wm63vb9kh8dpk0gzkr55c27lk01fgw9hb"; depends=[clusterProfiler data_table DT gplots igraph jsonlite plyr RColorBrewer]; }; + nethet = derive2 { name="nethet"; version="1.22.0"; sha256="1vfyyzmq52cfbd3rnk8mg3kcwj932c6g6my4kr2qvjq9md3acxcx"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network]; }; + netprioR = derive2 { name="netprioR"; version="1.16.0"; sha256="1nhsrjxn1q21f554xrgwd3pmxycmaqqigyqq4n4bfh17h8mkymng"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; }; + netresponse = derive2 { name="netresponse"; version="1.50.0"; sha256="0hpsrimi10yzrry6kf35wxx47d89n8lgih9fng3b8vmcalrxc015"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; + networkBMA = derive2 { name="networkBMA"; version="2.30.1"; sha256="0b421apq0crbml3mddskdcspvh60k0vwip666x8fl8743cjxq79r"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; }; + ngsReports = derive2 { name="ngsReports"; version="1.6.1"; sha256="1n1wknabs07a2wxmgnw8sy2yki3dxx075n7jrvx0xky4gyyjf6sx"; depends=[BiocGenerics Biostrings checkmate dplyr DT FactoMineR forcats ggdendro ggplot2 lifecycle lubridate pander plotly readr reshape2 rmarkdown Rsamtools scales ShortRead stringr tibble tidyr tidyselect viridisLite zoo]; }; + nnNorm = derive2 { name="nnNorm"; version="2.54.0"; sha256="0sr3vajx415yfyv0rw273l90p1blc62bd1sn47xbhq0jhv1bp6w7"; depends=[marray nnet]; }; + nondetects = derive2 { name="nondetects"; version="2.20.0"; sha256="1qhxvgdkzzskh9gc6x6761s67mfqxi2nk84780r5ll50k7wp9m4x"; depends=[arm Biobase HTqPCR limma mvtnorm]; }; + normalize450K = derive2 { name="normalize450K"; version="1.18.0"; sha256="185yv77z0zp3vz13k9w8jlb0839pz25jvihxypcfciccqy17jz2d"; depends=[Biobase illuminaio quadprog]; }; + normr = derive2 { name="normr"; version="1.16.0"; sha256="0vpdhzl0qyln7g6isq6l3r24lrrfnpp969gfbi4kmfnixbb32j1n"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; }; + npGSEA = derive2 { name="npGSEA"; version="1.26.0"; sha256="0wlvxsxykj14hc103skf8f38sk9920mdcddsi1c416159z43bhwl"; depends=[Biobase BiocGenerics GSEABase]; }; + nuCpos = derive2 { name="nuCpos"; version="1.8.0"; sha256="03ybqzdmq6fzg3l4knrwg3pfv32zsxr67k7c6i86j9h7np718pqh"; depends=[]; }; + nucleR = derive2 { name="nucleR"; version="2.22.0"; sha256="0lppa1bihcys9cmr89xdfbjil7557b3x7xdmr656icg54awcs9bw"; depends=[Biobase BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr Rsamtools S4Vectors ShortRead]; }; + nucleoSim = derive2 { name="nucleoSim"; version="1.18.0"; sha256="0wzzb1snw63ks0nikw2k5mjwhffs6ka5b0wkih7p06lcrshypbik"; depends=[IRanges S4Vectors]; }; + occugene = derive2 { name="occugene"; version="1.50.0"; sha256="1qki6s74z6lzy4qfclcrr7bq1gyi7n028vi1lkifzj2qscjbm36q"; depends=[]; }; + odseq = derive2 { name="odseq"; version="1.18.0"; sha256="15864c2w9akx1z9fks9l84d7car48z98mqgfzlx9cqz7x1q2s49a"; depends=[kebabs mclust msa]; }; + oligo = derive2 { name="oligo"; version="1.54.1"; sha256="0cpfkvxpni7an361li0k0qlfcraj7z9zv71r25dbly5kp3dql7k3"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; + oligoClasses = derive2 { name="oligoClasses"; version="1.52.0"; sha256="19p6h0cgnma5md5mm9bn6rxfhr0a9znljgdbvsqybms6asvh18gy"; depends=[affyio Biobase BiocGenerics BiocManager Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; + omicRexposome = derive2 { name="omicRexposome"; version="1.12.1"; sha256="0rn3v02mzqmvibdqwsrcd9h40pphsa0fxmkq9rmf6616idfbxjds"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; }; + omicade4 = derive2 { name="omicade4"; version="1.30.0"; sha256="1q1kzykrp3393c0mr6dmpw9blnb34747i3b45j5llc76r7rl787l"; depends=[ade4 Biobase made4]; }; + omicplotR = derive2 { name="omicplotR"; version="1.10.0"; sha256="1ghwr4x5sfbqz8kcx8zb3bhqyy3jh492ibi488lwhzj2sjxycrlh"; depends=[ALDEx2 compositions DT jsonlite knitr matrixStats rmarkdown shiny vegan zCompositions]; }; + omicsPrint = derive2 { name="omicsPrint"; version="1.10.0"; sha256="1pnsn68pscbii9kklc4dj7s19zcvyax8zjifccagnryx6n7q796c"; depends=[MASS matrixStats MultiAssayExperiment RaggedExperiment SummarizedExperiment]; }; + oncomix = derive2 { name="oncomix"; version="1.12.0"; sha256="1dzlqyh9nsay11d0n03wabzjlk7329f7d29lbxf6xs0v42w1m4df"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; }; + oneSENSE = derive2 { name="oneSENSE"; version="1.12.0"; sha256="0snpa5r2r0kmmjzd47wyybsajp44vf2clqbg3z9yyjszx9qal790"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; }; + onlineFDR = derive2 { name="onlineFDR"; version="1.8.0"; sha256="0232bgdgv4zfp9hl6whv3qfflkg11w5a9189l8wz4048ys54kssq"; depends=[]; }; + ontoProc = derive2 { name="ontoProc"; version="1.12.0"; sha256="08sidx0b4mmnlsghgcrr484ih6v33kdknar7y0yrxbjndzbb2iik"; depends=[AnnotationDbi Biobase BiocFileCache dplyr DT graph igraph magrittr ontologyIndex ontologyPlot Rgraphviz S4Vectors shiny]; }; + openCyto = derive2 { name="openCyto"; version="2.2.0"; sha256="02dymy5fa0wjd4pql3jdv1d65mak7ra4il96va7c0km8s87rn40v"; depends=[Biobase BiocGenerics clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; + openPrimeR = derive2 { name="openPrimeR"; version="1.12.1"; sha256="0wgy2f66lr6pr9yqxkj3y23f29pnk0mzjayh31rk75sm1nw7rxjh"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; }; + openPrimeRui = derive2 { name="openPrimeRui"; version="1.12.0"; sha256="1n5zz5vv8fpc3p9w9nf5bc1x4w7l664wvbp25mmm7d0sjjcridnq"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; }; + oposSOM = derive2 { name="oposSOM"; version="2.8.0"; sha256="1ndsy165pkr1w43q7vj83x49l6g50ag1cg1zd4kip1jba77vdcd0"; depends=[ape Biobase biomaRt fastICA fdrtool igraph pixmap Rcpp RcppParallel scatterplot3d tsne]; }; + oppar = derive2 { name="oppar"; version="1.18.0"; sha256="1ililwr4xl1r1814sdqbgq3ypc5l9mbam3xhmk0pgrb5pcvq7hc6"; depends=[Biobase GSEABase GSVA]; }; + oppti = derive2 { name="oppti"; version="1.4.0"; sha256="1im77fy7qxvflhzbzir1igsagjdx4glpxs7dw2f5rbzmxzqph8w4"; depends=[devtools ggplot2 knitr limma pheatmap RColorBrewer reshape]; }; + optimalFlow = derive2 { name="optimalFlow"; version="1.2.0"; sha256="1fv73ra0iabw8dbbi8647hbb586j5mvzgws8zy4r20yyfyd08ryn"; depends=[dbscan doParallel dplyr ellipse flowMeans foreach optimalFlowData randomForest Rfast rgl rlang robustbase transport]; }; + pRoloc = derive2 { name="pRoloc"; version="1.30.0"; sha256="037vw7py1w0by59qpsn3c5vf4x1zcp4c9q45crfwx0i72s5v9wyk"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class coda dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr LaplacesDemon lattice MASS mclust mixtools MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; }; + pRolocGUI = derive2 { name="pRolocGUI"; version="2.0.0"; sha256="0g746czwdivls5cc6pfgydsbfi22w0c042ri14hqyxgb2437rxgn"; depends=[Biobase BiocGenerics colorspace colourpicker dplyr DT ggplot2 MSnbase pRoloc scales shiny shinydashboard shinydashboardPlus shinyhelper shinyjs shinyWidgets]; }; + packFinder = derive2 { name="packFinder"; version="1.2.0"; sha256="0f8fpsyvdfy7dc0695xgymqzsbv0b9gfgxgigw8584805qs8661g"; depends=[ape Biostrings GenomicRanges IRanges kmer S4Vectors]; }; + padma = derive2 { name="padma"; version="1.0.0"; sha256="0zi99gakwsgyb3k4lmg8s5xd7j7fdvf87qnyzgaqr1qc1hhcm0qw"; depends=[FactoMineR MultiAssayExperiment S4Vectors SummarizedExperiment]; }; + pageRank = derive2 { name="pageRank"; version="1.0.0"; sha256="1ycqz5sl8az3vdr52x6sjng66q4ijca475i668cn5kl40f8cyidp"; depends=[GenomicRanges igraph motifmatchr]; }; + paircompviz = derive2 { name="paircompviz"; version="1.28.0"; sha256="1zjjzng3mx99c2p27203sprq66lpm4w39pkicb0i0mzwl63i4kzn"; depends=[Rgraphviz]; }; + pandaR = derive2 { name="pandaR"; version="1.22.0"; sha256="0ilmagdib4d8bz7vxg6cmibqvjxm4hfrr789mlnq24v1fz6mg5zp"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; }; + panelcn_mops = derive2 { name="panelcn.mops"; version="1.12.0"; sha256="0cv20bpsmv6vn64q8ss3zdi6m1m9bqjbq8b6f4gkjhv61v5fpnr4"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; + panp = derive2 { name="panp"; version="1.60.0"; sha256="165rgqxff1i36lg8razdgspz4rl6wnz7h419bmjici7vwmjm9grf"; depends=[affy Biobase]; }; + parglms = derive2 { name="parglms"; version="1.22.0"; sha256="1x8ps1i7cjf57yrj2i31gch78cx10rirdw1lm4j4fl4hqy8vrw4m"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; + parody = derive2 { name="parody"; version="1.48.0"; sha256="1prq3y163fw7m9z094jhqcaq4n79m9a0bh16nf86qsbbivy2153d"; depends=[]; }; + pathRender = derive2 { name="pathRender"; version="1.58.0"; sha256="1vkp5c97haw1z41c61yrjwsjq9a38hngandwasx88kh1glgkr1dy"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; + pathVar = derive2 { name="pathVar"; version="1.20.0"; sha256="1wga41vgw6vcaciry8i794gdkc4mbirrbbiml5fav7ivairz4avl"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; + pathifier = derive2 { name="pathifier"; version="1.28.0"; sha256="0mx4bsdafsb92q940z9c47z6582zb239iss7032cplars6r2rmx3"; depends=[princurve R_oo]; }; + pathview = derive2 { name="pathview"; version="1.30.1"; sha256="11fisiksw1y64ii9q8p2znyp9w8mlqzgiaacmycw59rngkjlmbs4"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; + pathwayPCA = derive2 { name="pathwayPCA"; version="1.6.3"; sha256="0hvzbr0m25av4a7n428bdvrlzwilrbjd9xqw39zbr1jni2p26dri"; depends=[lars survival]; }; + paxtoolsr = derive2 { name="paxtoolsr"; version="1.24.0"; sha256="0wgz1hppakc9j94xx5327z1563skp4klbsh1vn7p5p92pqxpyjmn"; depends=[httr igraph jsonlite plyr R_utils readr rJava rjson XML]; }; + pcaExplorer = derive2 { name="pcaExplorer"; version="2.16.0"; sha256="0b715cs921xll2b3061s0qxx495ydmrhy84ig2q6x8rdmp2kmxxs"; depends=[AnnotationDbi base64enc biomaRt DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats heatmaply IRanges knitr limma NMF pheatmap plotly plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; }; + pcaMethods = derive2 { name="pcaMethods"; version="1.82.0"; sha256="04xb4vjky6hq58l30i1iq9rv5gzjdxnidjxpnzg7pvg67vz8pgf0"; depends=[Biobase BiocGenerics MASS Rcpp]; }; + pcot2 = derive2 { name="pcot2"; version="1.58.0"; sha256="0igp8925c4hs45vah8zdhzampm5lrrxcc80822nbqm3vzw6a9x9n"; depends=[amap Biobase]; }; + pcxn = derive2 { name="pcxn"; version="2.12.0"; sha256="1l4b5lwlpspzsnaymargszzl5nsdd4i9zz4y7hg9aclqvc9p0g4q"; depends=[pcxnData pheatmap]; }; + pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.54.0"; sha256="1l98m4dj463rsqm4jwhq0792cdwqr53prhva3fpxq2vflfhlw761"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + peakPantheR = derive2 { name="peakPantheR"; version="1.4.0"; sha256="1dg047da4rnc2hdl4ryfa9z6cwa06904h3g06c5f310g5nwhxfmw"; depends=[doParallel DT foreach ggplot2 gridExtra minpack_lm MSnbase mzR scales shiny shinycssloaders shinythemes stringr XML]; }; + peco = derive2 { name="peco"; version="1.2.0"; sha256="1qv0bpykjvl7vkdvzch2fcf854d9pdlwwf9ggh9xisl5n66bbb3a"; depends=[assertthat circular conicfit doParallel foreach genlasso scater SingleCellExperiment SummarizedExperiment]; }; + pepStat = derive2 { name="pepStat"; version="1.24.0"; sha256="08ilvgnvj5s6kwaax3axx8nn8kpxqkb8va9d3cfcy1lqin4nqhk5"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; + pepXMLTab = derive2 { name="pepXMLTab"; version="1.24.0"; sha256="170ihyqj4nvim19222lgpr2h1dinb4rbirdj42bbp4qvqsxqpb1d"; depends=[XML]; }; + periodicDNA = derive2 { name="periodicDNA"; version="1.0.0"; sha256="11ag81mp5srqmnp1kf8bz77rw2l8zyc3q69rmcasrv0cpwm1w5pv"; depends=[BiocParallel Biostrings BSgenome cowplot GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr rtracklayer S4Vectors zoo]; }; + perturbatr = derive2 { name="perturbatr"; version="1.10.0"; sha256="1ny5dlkdr3bzb06fs8r777jnx7x6xgpx4zb1d1sqpq5irzxcag5p"; depends=[assertthat diffusr doParallel dplyr foreach formula_tools ggplot2 igraph lazyeval lme4 magrittr rlang scales tibble tidyr]; }; + pgca = derive2 { name="pgca"; version="1.14.0"; sha256="1si07zxkhvy966c4brdjldwll6f4zyk419ji730hmfw7jsif4ni5"; depends=[]; }; + phantasus = derive2 { name="phantasus"; version="1.10.0"; sha256="0cnzw91is8rwj0wr6j526ymihy8w1cfpasijbni1igwsc3f7sfmm"; depends=[AnnotationDbi assertthat Biobase ccaPP curl DESeq2 fgsea GEOquery ggplot2 gtable htmltools httpuv httr jsonlite limma Matrix opencpu pheatmap protolite rhdf5 Rook scales stringr svglite]; }; + phemd = derive2 { name="phemd"; version="1.6.0"; sha256="182y80fcqb9skb1xk68drbrlmy9v516pk5nbxxvj0mpk5r1bpc89"; depends=[Biobase BiocGenerics cluster cowplot destiny ggplot2 igraph maptree monocle phateR pheatmap pracma RANN RColorBrewer reticulate Rtsne S4Vectors scatterplot3d Seurat SingleCellExperiment SummarizedExperiment transport VGAM]; }; + phenoTest = derive2 { name="phenoTest"; version="1.38.0"; sha256="0jmzzg2ybcwaidd7z8176kz9gs9m0m7a4f4f30k6j6va385dkr53"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach limma mgcv survival xtable]; }; + phenopath = derive2 { name="phenopath"; version="1.14.0"; sha256="1y3gkk8pavkmgqpg9f5naikfhws4p9gzj58qg1m8namhmjqmphvl"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; }; + philr = derive2 { name="philr"; version="1.16.0"; sha256="09x8yahm1m6l6fsfqspjns4a8fzfcpx1zqf5cx8glhig7dcdfaq0"; depends=[ape ggplot2 ggtree phangorn tidyr]; }; + phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.14.3"; sha256="1g0w17j3gslkqp7p7l3ml2zg8am7vxzczq7q5d30q1ylh4n0b6n7"; depends=[matrixStats plyr]; }; + phyloseq = derive2 { name="phyloseq"; version="1.34.0"; sha256="1mzwkcyf0wqlp8y1mgskvlrkalqmr9ag3zkw5s3hznkv6ynx3d5l"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; + piano = derive2 { name="piano"; version="2.6.0"; sha256="1hcdqvfk86wxblbbsjwnyqbs5djgbfxbb7dhhnfqwwvfpryi9mz6"; depends=[Biobase BiocGenerics DT fgsea gplots htmlwidgets igraph marray relations scales shiny shinydashboard shinyjs visNetwork]; }; + pickgene = derive2 { name="pickgene"; version="1.62.0"; sha256="1ankg0pjmlcmkqvhzwbawm0x7c1ddf2bhj6a7wm8q76qm466v856"; depends=[MASS]; }; + pipeComp = derive2 { name="pipeComp"; version="1.0.0"; sha256="0p3ng4q37mjc5b98h1kv9l0m40l3hvma84wpg5ixfzbayipdixl3"; depends=[aricode BiocParallel circlize clue cluster ComplexHeatmap cowplot dplyr ggplot2 intrinsicDimension knitr Matrix matrixStats randomcoloR RColorBrewer reshape2 Rtsne S4Vectors scales scater scran Seurat SingleCellExperiment SummarizedExperiment uwot viridisLite]; }; + pipeFrame = derive2 { name="pipeFrame"; version="1.6.0"; sha256="16yp93h3w8ax25cpfsg697bvbz1b1348dnrccy19x46i1ingnv08"; depends=[Biostrings BSgenome digest GenomeInfoDb magrittr visNetwork]; }; + pkgDepTools = derive2 { name="pkgDepTools"; version="1.56.0"; sha256="1g8l2b4b2a40dx37s5ghln886dmjzp8aa8w4yyfvhzf4411cwms7"; depends=[graph RBGL]; }; + plethy = derive2 { name="plethy"; version="1.28.0"; sha256="0f50avlrrj8x95a9vvd6z3m9bvj1l3cs35mann8srsc756pgbiqz"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; + plgem = derive2 { name="plgem"; version="1.62.0"; sha256="039gqwsm1v6q8v8b248nm8g9gnsk379mfx65rbgdmh3chsd8pm8a"; depends=[Biobase MASS]; }; + plier = derive2 { name="plier"; version="1.60.0"; sha256="079jq9lbl2iklsbd1psv11jxjj33wy10kva80749zqs2lfmcc5dy"; depends=[affy Biobase]; }; + plotGrouper = derive2 { name="plotGrouper"; version="1.8.0"; sha256="1c3f3x0z9smpcvz6bzalqbmhabgcph1rclarh4l1afgn9hba3rdi"; depends=[colourpicker dplyr egg ggplot2 ggpubr gridExtra gtable Hmisc magrittr readr readxl rlang scales shiny shinythemes stringr tibble tidyr]; }; + plyranges = derive2 { name="plyranges"; version="1.10.0"; sha256="1mk9qi8r8saalb16jimilk9g6hdwvlxrbkj2hnjj5f8nnc228jr0"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr rlang Rsamtools rtracklayer S4Vectors tidyselect]; }; + pmm = derive2 { name="pmm"; version="1.22.0"; sha256="0c6280cfyhnyfk5v7fkdy7rs8x2qbkp2y19jh2399b7f0yycaacy"; depends=[lme4]; }; + pmp = derive2 { name="pmp"; version="1.2.1"; sha256="08cfa8k4rl2jj1sbwlg1ba7kvq450ndsndsm7db08c9696rvg9qq"; depends=[ggplot2 impute matrixStats missForest pcaMethods reshape2 S4Vectors SummarizedExperiment]; }; + podkat = derive2 { name="podkat"; version="1.22.0"; sha256="1s6al51cvnnszk1kh4lcxigqc7j8j5yndvkykmizk0048ab4ly5n"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rhtslib Rsamtools]; }; + pogos = derive2 { name="pogos"; version="1.10.0"; sha256="0jn1c9mjpqhirymh8qa4xnddn6wrvxabimxy94ia3bwpfg6bl81s"; depends=[ggplot2 httr ontoProc rjson S4Vectors shiny]; }; + polyester = derive2 { name="polyester"; version="1.26.0"; sha256="1g813svwcrlfny78rqd4wlcg7snfnj88ldw3q7zpksidipxjyhwk"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; }; + powerTCR = derive2 { name="powerTCR"; version="1.10.3"; sha256="0abrnkcnpy92d2f1i58n2lx4cgyyfwglwnrfzbc7g89dysdpyvrw"; depends=[cubature doParallel evmix foreach magrittr purrr truncdist vegan VGAM]; }; + ppiStats = derive2 { name="ppiStats"; version="1.56.0"; sha256="0b0ay6gymfcxbdp0ws0k8yzypqzl4391jjkgkmv3wwvb4vg0h5y8"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; + pqsfinder = derive2 { name="pqsfinder"; version="2.6.0"; sha256="1c3s89r80wm1hk3ng5kggby1290zhwyixcbvqj0h5kf536m1f9cs"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; }; + pram = derive2 { name="pram"; version="1.6.0"; sha256="0494rh75vqdgd7ffiq8lwpr6743bb7bzb5ipc2h4brqrg4vjcpiz"; depends=[BiocGenerics BiocParallel data_table GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; + prebs = derive2 { name="prebs"; version="1.30.0"; sha256="0z6xhyy4k5zsp1w285fsf1jdn89n00j8n9dn4rss2d810zv0d1x6"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; + preciseTAD = derive2 { name="preciseTAD"; version="1.0.0"; sha256="0dr3ix0yq792nj0rxxsmh6nzj9zz3kp4krs6nd6bbbba4vhd9p07"; depends=[caret cluster dbscan doSNOW e1071 foreach GenomicRanges IRanges ModelMetrics pbapply pROC PRROC randomForest S4Vectors]; }; + predictionet = derive2 { name="predictionet"; version="1.36.0"; sha256="0lsybdx2c5hkbkgz1d7rn3phl47gka0c09dni13fxb9km4r4bj00"; depends=[catnet igraph MASS penalized RBGL]; }; + preprocessCore = derive2 { name="preprocessCore"; version="1.52.1"; sha256="1hz7rlpscaczvvcalky2f5bmr70aii455549m7f6wk10aklp3nll"; depends=[]; }; + primirTSS = derive2 { name="primirTSS"; version="1.8.0"; sha256="0smlhv67vjy8in65z10c3i8zcmimqy3p3zrfghg34dna2402rsyp"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg38 dplyr GenomicRanges GenomicScores Gviz IRanges JASPAR2018 phastCons100way_UCSC_hg38 purrr R_utils rtracklayer S4Vectors shiny stringr TFBSTools tibble tidyr]; }; + proActiv = derive2 { name="proActiv"; version="1.0.0"; sha256="0540psb9y2n572zc75hyry1kdq53mq5ylhkmvqzwz8hgck75bzm3"; depends=[AnnotationDbi BiocParallel data_table DESeq2 dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges rlang S4Vectors SummarizedExperiment tibble]; }; + proBAMr = derive2 { name="proBAMr"; version="1.24.0"; sha256="1ca7dbkc2ik8gfg0jif3l4y62vz2ibd74dxivyxcnsqdqdx4db9a"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; + proBatch = derive2 { name="proBatch"; version="1.6.0"; sha256="07im4aa6r85sln8fx3kyygig1y6qzy6v9rsfj68llcwkr1fngvm5"; depends=[Biobase corrplot data_table dplyr ggfortify ggplot2 lazyeval lubridate magrittr pheatmap preprocessCore purrr pvca RColorBrewer reshape2 rlang scales sva tibble tidyr viridis wesanderson WGCNA]; }; + proDA = derive2 { name="proDA"; version="1.4.0"; sha256="1vhb27dha2adbcknrrv965z6zdrsqfrpz3ihma514ay0n0gr90fc"; depends=[BiocGenerics extraDistr S4Vectors SummarizedExperiment]; }; + proFIA = derive2 { name="proFIA"; version="1.16.3"; sha256="0piqg7f3d2263j98q8vn3502vkwgi4xsa65anp0hxgw7072kp5bh"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; }; + procoil = derive2 { name="procoil"; version="2.18.0"; sha256="1y932hq5ffq98ypaxd58zqwpq1hshi8x8ny4k3pvp7xgkxid5gq3"; depends=[Biostrings kebabs S4Vectors]; }; + profileScoreDist = derive2 { name="profileScoreDist"; version="1.18.0"; sha256="1yxp172ggsc54lgvbrmgazj886wnw2krpssinnfjjn7cyzdmpg86"; depends=[BiocGenerics Rcpp]; }; + profileplyr = derive2 { name="profileplyr"; version="1.6.0"; sha256="10ki9gp5pfrb8m015v5csl353mrqcqn9fbj5qwh1kbbh6jxvgdqn"; depends=[BiocGenerics BiocParallel Cairo ChIPseeker circlize ComplexHeatmap dplyr EnrichedHeatmap GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr org_Hs_eg_db org_Mm_eg_db pheatmap R_utils rGREAT rjson rlang rtracklayer S4Vectors soGGi SummarizedExperiment tidyr tiff TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + progeny = derive2 { name="progeny"; version="1.12.0"; sha256="00lhzz4plmx5128khs298n6zv9204mhqv548lxxdhaw18b16vwm7"; depends=[Biobase dplyr ggplot2 ggrepel gridExtra tidyr]; }; + projectR = derive2 { name="projectR"; version="1.6.0"; sha256="03ggj1vqb7b2c0dlfp1syvi3zwab322lap7jf3mfd7mdiq2ljyl4"; depends=[cluster CoGAPS dplyr ggalluvial ggplot2 limma NMF RColorBrewer reshape2 ROCR scales viridis]; }; + proteinProfiles = derive2 { name="proteinProfiles"; version="1.30.0"; sha256="0z62j29y5d6p7bz70z6p4666s00s1ls1hj7m07w4gkfwi9jlvlmp"; depends=[]; }; + psichomics = derive2 { name="psichomics"; version="1.16.0"; sha256="036rqyr3xxj8k9a5gmm17vyzs5hlansya9j7402q5lrv9g9s1jfn"; depends=[AnnotationDbi AnnotationHub BiocFileCache cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma org_Hs_eg_db pairsD3 plyr R_utils Rcpp recount reshape2 Rfast shiny shinyBS shinyjs stringr SummarizedExperiment survival XML xtable]; }; + psygenet2r = derive2 { name="psygenet2r"; version="1.22.5"; sha256="0i5pbqvr15fhr6xfvk96r6falx2zlghxi846pb51srdggggxbnm6"; depends=[BgeeDB Biobase biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; }; + pulsedSilac = derive2 { name="pulsedSilac"; version="1.4.0"; sha256="1wqbxxlicnkdwmr8jgzkfjjbpc89vdmfcw6fspdvfh8zv8rzq24v"; depends=[cowplot ggplot2 ggridges MuMIn R_utils robustbase S4Vectors SummarizedExperiment taRifx UpSetR]; }; + puma = derive2 { name="puma"; version="3.32.0"; sha256="0ak989nkwk524jcip5b98mfixd8bvdgxv1205d6v8cjzk8rw3r62"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; + pvac = derive2 { name="pvac"; version="1.38.0"; sha256="0n2i830ai5yr42b7w0syn8jd81khqhb0sx0lqq7s6b7dzx52821j"; depends=[affy Biobase]; }; + pvca = derive2 { name="pvca"; version="1.30.0"; sha256="02x5q1d9k1a58ywdln27zmj8c90idim0010wibw01xkdfzqhjzh6"; depends=[Biobase lme4 Matrix vsn]; }; + pwOmics = derive2 { name="pwOmics"; version="1.22.0"; sha256="0gg68y95hbkzkp0iw6kcpsxrqxh3x2v4k514sz2jqrwj3hy71f18"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; }; + pwrEWAS = derive2 { name="pwrEWAS"; version="1.4.0"; sha256="119368qhbg2pxwjs9dyp2w2vlhhbxlxjwdivbbsdmlaa3x0yhxb1"; depends=[abind BiocManager CpGassoc doParallel doSNOW foreach genefilter ggplot2 limma pwrEWAS_data shiny shinyBS shinyWidgets truncnorm]; }; + qPLEXanalyzer = derive2 { name="qPLEXanalyzer"; version="1.8.2"; sha256="1s28z34rrdk2v04ldwsda36lhm1jfzy876mipzqb55pqa565b0kb"; depends=[assertthat Biobase BiocGenerics Biostrings dplyr ggdendro ggplot2 IRanges limma magrittr MSnbase preprocessCore purrr RColorBrewer readr rlang scales stringr tibble tidyr tidyselect]; }; + qckitfastq = derive2 { name="qckitfastq"; version="1.6.0"; sha256="0dilgqak6yh59q3ydnf1ypmfkrvq00g3w7lgkrp0p3va6xyryq1n"; depends=[data_table dplyr ggplot2 magrittr Rcpp reshape2 rlang RSeqAn seqTools zlibbioc]; }; + qcmetrics = derive2 { name="qcmetrics"; version="1.28.0"; sha256="065zrimqfqd7ia52gzbnan93khp25q2s5kf852a9igj5ngzv5b7g"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; + qpcrNorm = derive2 { name="qpcrNorm"; version="1.48.0"; sha256="1qa3m3zym2m64icysyfn4dwzlgslvlg0c5ljmxmyw834lk6zljca"; depends=[affy Biobase limma]; }; + qpgraph = derive2 { name="qpgraph"; version="2.24.3"; sha256="090idsm1zrrhbzp6r28nyimv7675ld7mx885v4hvh2js5m9znw3l"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; + qrqc = derive2 { name="qrqc"; version="1.44.0"; sha256="0p4gj73rbb03sikg7b6viz8k76x9j15wh3sxizhv3q5xmrjkkkqr"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rhtslib testthat xtable]; }; + qsea = derive2 { name="qsea"; version="1.16.0"; sha256="05xzpvfmg4q44jfvi4ycjlxlj1gvfqrip7qzny3kyxrr5wiykh9h"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges KernSmooth limma MASS Rsamtools rtracklayer zoo]; }; + qsmooth = derive2 { name="qsmooth"; version="1.6.0"; sha256="0yhhb62lyp4dxmm401jv4xv2kx8z9qdfc0pzngk6dbgv6pg86agq"; depends=[SummarizedExperiment sva]; }; + quantro = derive2 { name="quantro"; version="1.24.0"; sha256="1mq4hda73idkq0lkfrhcmiz4kkalfn47dh3i75br5fi33mdgc0k2"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; + quantsmooth = derive2 { name="quantsmooth"; version="1.56.0"; sha256="14zd5zf8cyaps91c7dkw1a7bm089nghgqgj6z72aznqsqdq710fr"; depends=[quantreg]; }; + qusage = derive2 { name="qusage"; version="2.24.0"; sha256="1i63y29g36fwdkaj2vn68np003i96c85viynjq8j4mfzgmb3kch7"; depends=[Biobase emmeans fftw limma nlme]; }; + qvalue = derive2 { name="qvalue"; version="2.22.0"; sha256="0xbww16lz0k2p4mmq1aqd7iz7d8rvzgw1gm55jy6xbx19ymj64i5"; depends=[ggplot2 reshape2]; }; + r3Cseq = derive2 { name="r3Cseq"; version="1.36.0"; sha256="0cx99cvaw3qzmvp2v16ap3g4pmfw7dkyj8kvxmr9mc2ql6vazy3i"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; + rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.30.0"; sha256="0icbdi3nc9mpc2sh7gvfprg2q7d0j15wzsaadv0ngj5nd09vv9yc"; depends=[data_table XML]; }; + rCGH = derive2 { name="rCGH"; version="1.20.0"; sha256="0d4wpfbx1diaccyaii6jfq9snb02vs4y7hrg2p74jmsjs82r8sm8"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + rDGIdb = derive2 { name="rDGIdb"; version="1.16.0"; sha256="04lhwzwmfw7q38yalpf0k17zpspazqgipksdr3sip199k1yfiri0"; depends=[httr jsonlite]; }; + rGADEM = derive2 { name="rGADEM"; version="2.38.0"; sha256="0x13glgkcnjg4qsn0v0qgzy6bgmghqpvgwfww2ha641p0c5i9qzw"; depends=[Biostrings BSgenome GenomicRanges IRanges seqLogo]; }; + rGREAT = derive2 { name="rGREAT"; version="1.22.0"; sha256="0p2b8cqxibxxmsh687y7yvlvr2a5ipiz53jb4wsr8ddypynb1asj"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; + rRDP = derive2 { name="rRDP"; version="1.24.0"; sha256="1dvllc8b3lk2n3g7z97k1bs2psgqx94l6yljw09vckss96hx4gpg"; depends=[Biostrings]; }; + rSWeeP = derive2 { name="rSWeeP"; version="1.2.0"; sha256="0xl8nrlql3xcv9qlcgs7qkgb4psy0wx8yn53ixxl4my9b2ah8p3p"; depends=[pracma]; }; + rScudo = derive2 { name="rScudo"; version="1.6.0"; sha256="1azxkfkvzpvs0dxja8r10s2i0f7gk1r8xab5348r8vh6gx72dwhh"; depends=[Biobase BiocGenerics igraph S4Vectors stringr SummarizedExperiment]; }; + rTRM = derive2 { name="rTRM"; version="1.28.0"; sha256="1viz805yxaz9g3sxk2sn11v8ghb91ribzrlhczafabmcm27aag1b"; depends=[AnnotationDbi DBI igraph RSQLite]; }; + rTRMui = derive2 { name="rTRMui"; version="1.28.0"; sha256="00jnq3dfl9qgq5z713jqvxvm84bgr6x87f4k8yxk2pqxp3mjnc37"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; + rWikiPathways = derive2 { name="rWikiPathways"; version="1.10.2"; sha256="17q03y7svx1zlipl0aiwaj7msl70sx3w1n2m5w3dwgs2yzdkb40b"; depends=[data_table httr RCurl rjson tidyr XML]; }; + rain = derive2 { name="rain"; version="1.24.0"; sha256="1cac8jajaxyy0sljzp5wpbbdhyvi1xfczc80xfwjn8c2zq73vqqy"; depends=[gmp multtest]; }; + rama = derive2 { name="rama"; version="1.64.0"; sha256="1pq0jzfgrq28v5ar8h1gxjv1052m84ina2j60rrda2fyap5j5s0x"; depends=[]; }; + ramwas = derive2 { name="ramwas"; version="1.14.0"; sha256="1h0v8nikjs4li7hk0f5ppifwwsjmqd0xk5n44skixv1v4hargqp9"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; }; + randPack = derive2 { name="randPack"; version="1.36.0"; sha256="1lv6gry0biwmil3c6f2w1kyrvfyxlxflzwa2942gpljkfwadjars"; depends=[Biobase]; }; + randRotation = derive2 { name="randRotation"; version="1.2.2"; sha256="1ij2mjnnwr2bq7knkvxzajr6x7459xxww6kgdrqf5wlnh2q88wq7"; depends=[Rdpack]; }; + rbsurv = derive2 { name="rbsurv"; version="2.48.0"; sha256="0bc7r2q5n7daz59vyw2pjqywj3skqpjq46wz1w4a87rixq0gb8dg"; depends=[Biobase survival]; }; + rcellminer = derive2 { name="rcellminer"; version="2.12.1"; sha256="130i0fsdh2my48d4bkhwpip38bl9mb79r64bsb3p97ikl11s84mg"; depends=[Biobase ggplot2 gplots rcellminerData shiny stringr]; }; + rebook = derive2 { name="rebook"; version="1.0.0"; sha256="0djnsd8695smim2rm7jpfc5z2f4kqmaq4vd0bfm4vbi4vd40zdyh"; depends=[BiocStyle callr CodeDepends knitr rmarkdown]; }; + receptLoss = derive2 { name="receptLoss"; version="1.2.0"; sha256="0bkcnql30qw8dzbgz9xps0jwhvqmrpnzjc4l1v35qmyy65z3qxw0"; depends=[dplyr ggplot2 magrittr SummarizedExperiment tidyr]; }; + reconsi = derive2 { name="reconsi"; version="1.2.0"; sha256="18vdmdq9jdb9i7ssaj48ibi8sxfv4xj1b6nhsb2qc1x4b6bvyc17"; depends=[ggplot2 KernSmooth matrixStats phyloseq reshape2]; }; + recount = derive2 { name="recount"; version="1.16.1"; sha256="13hrzc6x02kr9nsgw5x1z1ky4rb4s7ddqp5l0j0hwnqpnvlc92h1"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; }; + recount3 = derive2 { name="recount3"; version="1.0.7"; sha256="1cv068p8zcpzr5nk5xhw8x0ic2g2i5zhqrwzasmgbg4s2lik2g1z"; depends=[BiocFileCache data_table GenomicRanges Matrix R_utils RCurl rtracklayer S4Vectors sessioninfo SummarizedExperiment]; }; + recountmethylation = derive2 { name="recountmethylation"; version="1.0.0"; sha256="1cwdcxn5v95gccqjcgr56rizxkh1l194h4zzlwdi3m566666yla4"; depends=[BiocFileCache HDF5Array minfi R_utils RCurl rhdf5 S4Vectors]; }; + recoup = derive2 { name="recoup"; version="1.18.0"; sha256="1bdikndljhcb92c21ag1s6b6d692zq8rhhpiph8akkr4v3v4y9wy"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 httr Rsamtools RSQLite rtracklayer S4Vectors stringr]; }; + regionReport = derive2 { name="regionReport"; version="1.24.2"; sha256="17h9z05rzcj4ysaldwfn6c2wrynyzgl205b7n2ra1qf6g1wj4s3f"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; + regioneR = derive2 { name="regioneR"; version="1.22.0"; sha256="0c2khfyrgy3y68cj6b07s91hplabbj70xwdgwrf2bsd9h6gknjdi"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; }; + regsplice = derive2 { name="regsplice"; version="1.16.0"; sha256="0ngvblqhmvfixh6r5l6fw0fzkcqv2bnl99ld7k0ggbbsmzb4gnmr"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; }; + regutools = derive2 { name="regutools"; version="1.2.3"; sha256="1v8x5nzlnc6x4cjg7lhm5r6vh4ih7i8gs9sba02sj9nz5x8fbjwp"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings DBI GenomicRanges Gviz IRanges RCy3 RSQLite S4Vectors]; }; + restfulSE = derive2 { name="restfulSE"; version="1.12.0"; sha256="10g4fwgxdj94q4cmrzypslfdkbcwsig5f8acsidawn6yr7qwa264"; depends=[AnnotationDbi AnnotationHub bigrquery Biobase DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client rlang S4Vectors SummarizedExperiment]; }; + rexposome = derive2 { name="rexposome"; version="1.12.4"; sha256="0qjhgpx1pka5rqfymf5fzn9adr494v6xvfwsmy88x94jr070ph3s"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr reshape2 S4Vectors scales scatterplot3d stringr]; }; + rfPred = derive2 { name="rfPred"; version="1.28.0"; sha256="1knaa8laz3ls4k2wxp1991j4qa1yffs9pzydkgmpv24sniqpczif"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; + rfaRm = derive2 { name="rfaRm"; version="1.2.1"; sha256="1q77sv8wlzpzx0cs6xpw45k9al5rv7vcrkvrcaaiqizknafz7k02"; depends=[Biostrings data_table httr IRanges magick rsvg rvest S4Vectors stringi xml2]; }; + rgsepd = derive2 { name="rgsepd"; version="1.22.0"; sha256="1y672lmf1mdfs1nxrfbhvwlpk6d7x382x56mlld5w05zc8whvgwg"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; }; + rhdf5 = derive2 { name="rhdf5"; version="2.34.0"; sha256="0almr1vscrgj5g4dyrags131wia2pmdbdidlpskbgm44ha6hpmqi"; depends=[rhdf5filters Rhdf5lib]; }; + rhdf5client = derive2 { name="rhdf5client"; version="1.12.0"; sha256="0j7a6x9k902q0xg8491s73vsli0vl3s451vgqxdr95m0pg9g9bkc"; depends=[DelayedArray httr R6 rjson S4Vectors]; }; + rhdf5filters = derive2 { name="rhdf5filters"; version="1.2.1"; sha256="1bjlgc76vx0z81s8vci9ln1d2s3b157qnm32xs36mnyjk31ivasz"; depends=[Rhdf5lib]; }; + riboSeqR = derive2 { name="riboSeqR"; version="1.24.0"; sha256="07i64gch14rsbjlfv17s689wzlqbi7hcqhcw21pp6cw8bvhvd5xr"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools seqLogo]; }; + ribor = derive2 { name="ribor"; version="1.2.0"; sha256="0kd5i4l99hkfd48vdn7wibm74pkhd67jbn0lcz5dh4rhkv5iyajg"; depends=[dplyr ggplot2 hash rhdf5 rlang S4Vectors tidyr yaml]; }; + ribosomeProfilingQC = derive2 { name="ribosomeProfilingQC"; version="1.2.1"; sha256="15nvf5bhy33ry583zyfav2np0psnrdmwrv017fpadi772jd1qq31"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome cluster EDASeq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfittext ggplot2 ggrepel IRanges motifStack Rsamtools Rsubread rtracklayer RUVSeq S4Vectors scales XVector]; }; + rmelting = derive2 { name="rmelting"; version="1.6.0"; sha256="01cq5c532bibr2iclrfl7liclk89fw5qyyz4n3bnxp743l3xljpy"; depends=[Rdpack rJava]; }; + rnaEditr = derive2 { name="rnaEditr"; version="1.0.0"; sha256="03p0gv50v03lcdkwyxpdxls4blh6cp253lsbp30nb65l1zi6nlzs"; depends=[BiocGenerics bumphunter corrplot GenomeInfoDb GenomicRanges IRanges logistf plyr S4Vectors survival]; }; + rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.48.0"; sha256="0h3hfvzl2zl77ccabgbhvxl2rwfwnfk601vlgk5mzkljfdgjvj1b"; depends=[Biobase DBI edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; }; + rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.20.0"; sha256="1lyfr3vwfkp6ciaziq5qdrrahvjmai5s1x9a12kim6laifw4g4a3"; depends=[RColorBrewer]; }; + roar = derive2 { name="roar"; version="1.26.0"; sha256="0spidrcjnrcli0whkf6h8pa1i9dg9arjbm7b1skxbs6dn2k4yyqw"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; }; + rols = derive2 { name="rols"; version="2.18.3"; sha256="1gmlnli5gzpza9bdw73650bp22gxk1wgmk3qiyvhs9w78qs93zp7"; depends=[Biobase BiocGenerics httr jsonlite progress]; }; + ropls = derive2 { name="ropls"; version="1.22.0"; sha256="1h76s89hsafrkshpkx7vjinfni9lzfpnbfyg3fhkkrwpp1fnwyj5"; depends=[Biobase MultiDataSet]; }; + rpx = derive2 { name="rpx"; version="1.26.2"; sha256="068615f3fiswnj5jm7snp58cavxbffasprdx6l6aaxcfzyb9914a"; depends=[BiocFileCache rappdirs RCurl xml2]; }; + rqt = derive2 { name="rqt"; version="1.16.0"; sha256="01ksass8kfja4a971yvv5ybv3x63i0pz867nr938phjq3x04n16w"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; }; + rqubic = derive2 { name="rqubic"; version="1.36.0"; sha256="0isqp45cvc55ldbc4kr2dxcb78jl3csfsndvsz5cb439r4wa5qfz"; depends=[biclust Biobase BiocGenerics]; }; + rrvgo = derive2 { name="rrvgo"; version="1.2.0"; sha256="0hgnbrwhx4w47hnv5glq2zr2lgaydsypn3qi9l374x919261qlrf"; depends=[AnnotationDbi ggplot2 ggrepel GO_db GOSemSim pheatmap shiny tm treemap wordcloud]; }; + rsbml = derive2 { name="rsbml"; version="2.48.0"; sha256="0vrjfhwcpc699sq78pkm022fam3ahar8h3lx3fr879dd21k02g61"; depends=[BiocGenerics graph]; }; + rsemmed = derive2 { name="rsemmed"; version="1.0.0"; sha256="0py0c81ip382qff1ybdxzwkyjkj31d3qghyyh65girg4lnfqwyc5"; depends=[dplyr igraph magrittr stringr]; }; + rtracklayer = derive2 { name="rtracklayer"; version="1.50.0"; sha256="12zimhpdzjyzd81wrzz5hdbzvlgzcs22x1nnaf2jq4cba3ch5px8"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; + runibic = derive2 { name="runibic"; version="1.12.0"; sha256="0vx8p60s3bb0hc3dxj0y7sp8wdhhjsig4kn40gj1ai5q7lbvw0v6"; depends=[biclust Rcpp SummarizedExperiment testthat]; }; + sRACIPE = derive2 { name="sRACIPE"; version="1.6.0"; sha256="1sfmsgfr8dhqr2ib9f68bg43kcjpjbmvav8fiffrl6zcwli9wjx9"; depends=[BiocGenerics ggplot2 gplots gridExtra htmlwidgets MASS RColorBrewer Rcpp reshape2 S4Vectors SummarizedExperiment umap visNetwork]; }; + sSeq = derive2 { name="sSeq"; version="1.28.0"; sha256="0436lzz2q6cl07hr8rnk56v3b4lk7bhv4i717jzaw95ga73b2bx1"; depends=[caTools RColorBrewer]; }; + safe = derive2 { name="safe"; version="3.30.0"; sha256="1ax3kyp8xcfdv9iafzr58gg86k48dnzp4q71x6m94qbrrpjvvl2q"; depends=[AnnotationDbi Biobase SparseM]; }; + sagenhaft = derive2 { name="sagenhaft"; version="1.60.0"; sha256="0a12gynjc2g90i4k7rf808vwviwzal8l3nb0pj865i43vcrr571p"; depends=[SparseM]; }; + samExploreR = derive2 { name="samExploreR"; version="1.13.0"; sha256="0bimv4xmr0im6p7k5m4fzl3znpjcrgc6sn7vjyzy5nc5vkhycx52"; depends=[edgeR ggplot2 RNAseqData_HNRNPC_bam_chr14 Rsubread]; }; + sampleClassifier = derive2 { name="sampleClassifier"; version="1.14.2"; sha256="04xvvvskw12jkgpx7mm0q4dhy55p5dvqlk7qcdbrzys7hxarfwqw"; depends=[annotate e1071 ggplot2 MGFM MGFR]; }; + sangeranalyseR = derive2 { name="sangeranalyseR"; version="1.0.0"; sha256="1kri1hbk2zxx38ypqz30kd2i4745v08283dh30hmqq8s008zw1b4"; depends=[ape BiocStyle Biostrings data_table DECIPHER DT excelR ggdendro gridExtra kableExtra logger openxlsx phangorn plotly reshape2 rmarkdown sangerseqR seqinr shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringr zeallot]; }; + sangerseqR = derive2 { name="sangerseqR"; version="1.26.0"; sha256="19nmaq81vaxf2v17kk133gv7ki0wb01piqsswbjn31lk7x52v43v"; depends=[Biostrings shiny]; }; + sapFinder = derive2 { name="sapFinder"; version="1.28.0"; sha256="0r2zjrba72ihdaqwv55hg4zkjb6z3a16ffsg0b19wiipbgzjfmcp"; depends=[pheatmap Rcpp]; }; + sarks = derive2 { name="sarks"; version="1.2.0"; sha256="1zy49yjn6fvnr2klqwq0xhzal6c3k381lgfrqspa53p32r12zsw0"; depends=[binom Biostrings cluster IRanges rJava]; }; + savR = derive2 { name="savR"; version="1.28.0"; sha256="1vha9b7gndwjzvrzr1hdhv3wc6a1s2n9grxwfd78yb2lkysf4hic"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; + scAlign = derive2 { name="scAlign"; version="1.4.0"; sha256="0xavn9i4vl7y9ymzyjy9d7zdxhmm7d67jwwwx650gkmwkvhgcxgw"; depends=[FNN ggplot2 irlba purrr Rtsne Seurat SingleCellExperiment tensorflow]; }; + scBFA = derive2 { name="scBFA"; version="1.4.0"; sha256="161ak8w29x1r5h3cx2y3f1yrg6c6q53knd68ljaiwfppchil01nj"; depends=[copula DESeq2 ggplot2 MASS Matrix Seurat SingleCellExperiment SummarizedExperiment zinbwave]; }; + scCB2 = derive2 { name="scCB2"; version="1.0.0"; sha256="1acmcil38wcxknbr9dhbd76ssvwqsbby1i82x9l2iax4allhx9mb"; depends=[doParallel DropletUtils edgeR foreach iterators Matrix rhdf5 Seurat SingleCellExperiment SummarizedExperiment]; }; + scClassify = derive2 { name="scClassify"; version="1.2.0"; sha256="13y9xz6g7qmyiby6cxh719i7pa367agq5lvcsxvlsnmbzcqam0m6"; depends=[BiocParallel cluster diptest ggplot2 ggraph hopach igraph limma Matrix mgcv minpack_lm mixtools proxy proxyC S4Vectors statmod]; }; + scDD = derive2 { name="scDD"; version="1.14.0"; sha256="07l07fq5633ccq5d3l35dm34pwvaqfa3b3qwpn5v5xn99f5hfz0g"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; }; + scDataviz = derive2 { name="scDataviz"; version="1.0.0"; sha256="0p3ia0lab4n3y2i23cjnhi1iyl49a53yjldl3nc1s2lxqpl60jpp"; depends=[corrplot flowCore ggplot2 ggrepel MASS matrixStats RColorBrewer reshape2 S4Vectors scales Seurat SingleCellExperiment umap]; }; + scDblFinder = derive2 { name="scDblFinder"; version="1.4.0"; sha256="08nmmmcyn4vs79zyi1g4mc8br1dnsxb0b4sl3cgv6qdr513f0641"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular bluster DelayedArray igraph Matrix S4Vectors scater scran scuttle SingleCellExperiment SummarizedExperiment xgboost]; }; + scFeatureFilter = derive2 { name="scFeatureFilter"; version="1.10.0"; sha256="00w65r1zdmsi93d7xdrdxkq6a8qiplpkaiy17f2cqcyz44m28f9f"; depends=[dplyr ggplot2 magrittr rlang tibble]; }; + scGPS = derive2 { name="scGPS"; version="1.4.0"; sha256="0d210xrvpmrxc57ldmzkd2xa15y6wp6bv5sqx0jwbiz9cxmik3w0"; depends=[caret dplyr dynamicTreeCut fastcluster ggplot2 glmnet locfit Rcpp RcppArmadillo RcppParallel SingleCellExperiment SummarizedExperiment]; }; + scHOT = derive2 { name="scHOT"; version="1.2.0"; sha256="09j3fzr5ilyi6fmbrnzc0vhwr1m724hvimp18ic729dn6v1iaij9"; depends=[BiocParallel ggforce ggplot2 igraph IRanges Matrix reshape S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scMAGeCK = derive2 { name="scMAGeCK"; version="1.2.0"; sha256="00jyr868m892ys5l44s5nygfib7gffj6npyfri8lrdn1483d9ss9"; depends=[Seurat]; }; + scMerge = derive2 { name="scMerge"; version="1.6.0"; sha256="1545sr4k6p8y1nldkw5cyc330cv4mvbw1i0pcw52h4qm0ymndl77"; depends=[BiocParallel BiocSingular cluster DelayedArray DelayedMatrixStats distr igraph M3Drop pdist proxy ruv S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scPCA = derive2 { name="scPCA"; version="1.4.0"; sha256="070iacizxqpf4sn3872g137vxiv83baa3nfhk9f5pxygd17jx3x2"; depends=[assertthat BiocParallel cluster coop DelayedArray dplyr elasticnet kernlab Matrix matrixStats origami purrr Rdpack RSpectra sparsepca stringr tibble]; }; + scPipe = derive2 { name="scPipe"; version="1.12.0"; sha256="04yw75k9lyiwim5d0bh27lvim5png01y1hj27vd1d27zjl1mrija"; depends=[AnnotationDbi BiocGenerics biomaRt dplyr GenomicRanges GGally ggplot2 glue hash magrittr MASS mclust org_Hs_eg_db org_Mm_eg_db Rcpp reshape Rhtslib rlang robustbase rtracklayer S4Vectors scales scater SingleCellExperiment stringr SummarizedExperiment testthat zlibbioc]; }; + scRecover = derive2 { name="scRecover"; version="1.6.0"; sha256="1za3lwvm3f3lnmqdr1y4x6r9j8sz4sw9w30k3dj3imz96n39s9a0"; depends=[bbmle BiocParallel doParallel foreach gamlss kernlab MASS Matrix penalized preseqR pscl Rmagic rsvd SAVER]; }; + scRepertoire = derive2 { name="scRepertoire"; version="1.0.0"; sha256="1j42cznsrjhzshq66vjhp9fz6937bh01pm4zzc1m66azrib5kb7h"; depends=[Biostrings colorRamps dplyr ggalluvial ggdendro ggfittext ggplot2 powerTCR RColorBrewer reshape2 Seurat SingleCellExperiment stringr SummarizedExperiment vegan]; }; + scTGIF = derive2 { name="scTGIF"; version="1.4.0"; sha256="0wz1pd3d6x3s2pkgd7amycdxzqz4ay1s2xv117h65r1d2vdamwx9"; depends=[Biobase BiocStyle ggplot2 GSEABase igraph knitr msigdbr nnTensor plotly RColorBrewer Rcpp rmarkdown S4Vectors scales schex SingleCellExperiment SummarizedExperiment tagcloud tibble]; }; + scTHI = derive2 { name="scTHI"; version="1.2.0"; sha256="0744pykbzja9k14a8vd1z2r8737g9rbhflnhpj0kdyy9gk81xqzs"; depends=[BiocParallel Rtsne]; }; + scTensor = derive2 { name="scTensor"; version="2.0.0"; sha256="1v1pyminy5wglidd1siv9yby199jh01pqn9pmpsq3l32c5bzd9w7"; depends=[abind AnnotationDbi AnnotationHub BiocManager BiocStyle Category checkmate crayon DOSE ggplot2 GOstats heatmaply igraph knitr MeSHDbi meshr nnTensor outliers plotly plotrix reactome_db ReactomePA rmarkdown RSQLite rTensor S4Vectors schex SingleCellExperiment SummarizedExperiment tagcloud visNetwork]; }; + scater = derive2 { name="scater"; version="1.18.6"; sha256="0k1ls5gqv1zsn1w2kszhmbhwfccfjw8khk36s5zbf90rbbkw5609"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats ggbeeswarm ggplot2 gridExtra Matrix rlang S4Vectors scuttle SingleCellExperiment SummarizedExperiment viridis]; }; + scde = derive2 { name="scde"; version="2.18.0"; sha256="04da0w6n2yhf6k55blbbzk80lh96987169vjz75b9i7fj4ms857w"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; }; + scds = derive2 { name="scds"; version="1.6.0"; sha256="044bp86ghdcw6i2yq48dll5dcd3hajjsw6j3m2m8r6wlpy0vgc6j"; depends=[dplyr Matrix pROC S4Vectors SingleCellExperiment SummarizedExperiment xgboost]; }; + schex = derive2 { name="schex"; version="1.4.0"; sha256="092299dbj73gp5ndnw40vim803sm789wirw19h8v5n3sy0j0zy2i"; depends=[cluster concaveman dplyr entropy ggforce ggplot2 hexbin scales Seurat shiny SingleCellExperiment]; }; + scmap = derive2 { name="scmap"; version="1.12.0"; sha256="1sbi1rgpss8irrs95988cncncs028j5cx1da45rgghid8ykcx1fk"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scmeth = derive2 { name="scmeth"; version="1.10.0"; sha256="1qrgdzy2dricbfrx7z91mq3w833wb4c1pj5ghqdwig3gpyzqk6vj"; depends=[AnnotationHub annotatr Biostrings BSgenome bsseq DelayedArray DT GenomeInfoDb GenomicRanges HDF5Array knitr reshape2 rmarkdown SummarizedExperiment]; }; + scone = derive2 { name="scone"; version="1.14.0"; sha256="1lnyxcrw3kn5gi3n59dwdhkqps58cjxfknsjsj53qz5rv8iiqz73"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SummarizedExperiment]; }; + scoreInvHap = derive2 { name="scoreInvHap"; version="1.12.1"; sha256="117402mvc58xz3hdcy2369m9b547nm65489r3l84nvbbk5j3pdvj"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; }; + scp = derive2 { name="scp"; version="1.0.0"; sha256="0dn7i57l1f567w272dq7680cki4f2w5m81hnlaclxcck47mfxr7k"; depends=[dplyr magrittr MultiAssayExperiment QFeatures rlang S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scran = derive2 { name="scran"; version="1.18.7"; sha256="0hsr58b7xj2cqdkyjdpzyifg5wrl1lbylq2h91zbjh5861qjv2n4"; depends=[beachmat BH BiocGenerics BiocNeighbors BiocParallel BiocSingular bluster DelayedArray DelayedMatrixStats dqrng edgeR igraph limma Matrix Rcpp S4Vectors scuttle SingleCellExperiment statmod SummarizedExperiment]; }; + scruff = derive2 { name="scruff"; version="1.8.3"; sha256="1k1m0hxyhxrk22vbl30kjf7360hc3g7n7835m079bj6cm006pk2m"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 ggthemes plyr Rsamtools Rsubread rtracklayer S4Vectors scales ShortRead SingleCellExperiment stringdist SummarizedExperiment]; }; + scry = derive2 { name="scry"; version="1.2.0"; sha256="0b6k47kvbcvh6qh2ar9hh7kmaqk29ssn8hllq56kw0r3fxyk9vva"; depends=[BiocSingular DelayedArray glmpca HDF5Array Matrix SingleCellExperiment SummarizedExperiment]; }; + scuttle = derive2 { name="scuttle"; version="1.0.4"; sha256="0vfhxyv81y525qgk0s3bxy1yypj16h1bl7sc1a1jdqx11fxxv2l8"; depends=[beachmat BiocGenerics BiocParallel DelayedArray DelayedMatrixStats GenomicRanges Matrix Rcpp S4Vectors SingleCellExperiment SummarizedExperiment]; }; + segmentSeq = derive2 { name="segmentSeq"; version="2.24.0"; sha256="11z71v0lk3icflxgyygh7bzskla62wml16mb8mvjz4ih3k1y0cxs"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; + selectKSigs = derive2 { name="selectKSigs"; version="1.2.0"; sha256="126r2n8kikal3hi5dyfrx8qdm0g51h6gpkvhfm1ld95k3vd3w0v3"; depends=[gtools HiLDA magrittr Rcpp]; }; + semisup = derive2 { name="semisup"; version="1.14.0"; sha256="0wvshixl23c8rybj2wgsm0zz2fdgqn6r42dr9f12n4ydgr1lbrja"; depends=[VGAM]; }; + seq2pathway = derive2 { name="seq2pathway"; version="1.22.0"; sha256="1s7dxa4wrz5kdgjnvp31kq0ayyhh3280gm7p3462vf5fpysr21bk"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; + seqCAT = derive2 { name="seqCAT"; version="1.12.0"; sha256="0f2ysjjy4zxlbvrc53zxqbvahm8rbwrvy9yfpqyhj5sz4hwld16z"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges rlang rtracklayer S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; }; + seqCNA = derive2 { name="seqCNA"; version="1.36.0"; sha256="06ncqcl7ga4bx5gg5nhgslgjjs2ir08qz2bgc2s4d7akwnd3qxks"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; + seqLogo = derive2 { name="seqLogo"; version="1.56.0"; sha256="02rpzjjfg5chlwwfbvv72cm78cg2vfmdwzars0cin9hz1hd7rnq1"; depends=[]; }; + seqPattern = derive2 { name="seqPattern"; version="1.22.0"; sha256="0j68n6fwycxjpl2va5fw7ajb123n758s2pq997d76dysxghmrlzq"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; + seqTools = derive2 { name="seqTools"; version="1.24.0"; sha256="0fd7wjkbgjrflrsjzzwsbvdk36jv58b0b8qvz5c0wddnaz7kbvvb"; depends=[zlibbioc]; }; + seqbias = derive2 { name="seqbias"; version="1.38.0"; sha256="1m634sidmk6c603k2gflyiddkns9vr6ij591nmab523xk5r2f4b2"; depends=[Biostrings GenomicRanges Rhtslib]; }; + seqcombo = derive2 { name="seqcombo"; version="1.12.0"; sha256="08lprg0jhq6ha03w6qf44f80lz3xc8j08acakspg03x9ykvrv1ys"; depends=[Biostrings cowplot dplyr ggplot2 igraph magrittr rvcheck]; }; + seqplots = derive2 { name="seqplots"; version="1.27.0"; sha256="0lj0fr25kcr5yn0cdiwqc70kh0jxqvzdjy4lr1wdvmli3h8f8jbl"; depends=[BiocManager Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 Rsamtools RSQLite rtracklayer S4Vectors shiny]; }; + seqsetvis = derive2 { name="seqsetvis"; version="1.10.0"; sha256="1xrn7pjf68ny3jqzz4kynvxcbi7cwjbn5dxmms3zpjvp72rjll08"; depends=[data_table eulerr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma pbapply pbmcapply png RColorBrewer Rsamtools rtracklayer S4Vectors]; }; + sesame = derive2 { name="sesame"; version="1.8.12"; sha256="1w4qggplpmm4xfgrxksxnh7k1b304jq71illhiqv1vwdab3hbjqq"; depends=[BiocParallel DNAcopy GenomicRanges ggplot2 illuminaio IRanges MASS matrixStats preprocessCore randomForest S4Vectors sesameData stringr SummarizedExperiment tibble wheatmap]; }; + sevenC = derive2 { name="sevenC"; version="1.10.0"; sha256="13ycqnz0g92rxkws6q4yspy2kyc50swfy35f17w10j927d2a2lg4"; depends=[BiocGenerics boot data_table GenomeInfoDb GenomicRanges InteractionSet IRanges purrr readr rtracklayer S4Vectors]; }; + sevenbridges = derive2 { name="sevenbridges"; version="1.20.1"; sha256="1xw37jv0i52rdqsfhqzjz8xy36f562g8v9j13d802dsccxs5w76m"; depends=[curl data_table docopt httr jsonlite objectProperties S4Vectors stringr uuid yaml]; }; + shinyMethyl = derive2 { name="shinyMethyl"; version="1.26.0"; sha256="13dcpddwxb2f5w5qwnvb2awhfqhz2jsynbcb7czvrm3kw1b47hv2"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; + shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.28.0"; sha256="1kadivjy752crkl9vi2kbp9ksqbpqm6n5j8fkr5mlx1w7b1frzyn"; depends=[mixtools shiny xtable]; }; + sigFeature = derive2 { name="sigFeature"; version="1.8.0"; sha256="13jcdn1fy38nk92xda7bvglxb4p9fh1fqb0nby42ywl3nz3cg639"; depends=[BiocParallel biocViews e1071 Matrix nlme openxlsx pheatmap RColorBrewer SparseM SummarizedExperiment]; }; + sigPathway = derive2 { name="sigPathway"; version="1.58.0"; sha256="1fkw0ss471pllqxyjyif5lr35cr8sqpx31x0ccjp85lm3blws72l"; depends=[]; }; + siggenes = derive2 { name="siggenes"; version="1.64.0"; sha256="08wi2i6pqx06v13533y3mpli5fb637h0xfwcwy67ya9j2ygypv7w"; depends=[Biobase multtest scrime]; }; + sights = derive2 { name="sights"; version="1.16.0"; sha256="1p4ncgrfwfprn5qc8dhpc3lxjyw3qnr7ckj0k6jvrisryzx0cglp"; depends=[ggplot2 lattice MASS qvalue reshape2]; }; + signatureSearch = derive2 { name="signatureSearch"; version="1.4.6"; sha256="169r768x1xpgrn9kjafq506xirkfsqql8vxispbxnb8c93azjzpq"; depends=[AnnotationDbi BiocParallel clusterProfiler data_table DelayedArray DOSE dplyr ExperimentHub fastmatch fgsea ggplot2 GSEABase HDF5Array magrittr Matrix qvalue Rcpp reactome_db readr reshape2 rhdf5 RSQLite scales SummarizedExperiment visNetwork]; }; + signeR = derive2 { name="signeR"; version="1.16.0"; sha256="0xvzc961mf78vxmds0dnwkm9z1sfsh8cpv36snlfrp1wbds2hl80"; depends=[BiocGenerics Biostrings class GenomeInfoDb GenomicRanges IRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; }; + sigsquared = derive2 { name="sigsquared"; version="1.22.0"; sha256="17ik5as6z2qw8s7c1721p0s9bnqin8smv5qw2p8hm23qk102jswh"; depends=[Biobase survival]; }; + similaRpeak = derive2 { name="similaRpeak"; version="1.22.0"; sha256="0dy019zzyynpsjl6fvkwykqi4pk0k3dy30l64hfwnmvhy5prjpr2"; depends=[R6]; }; + simpleaffy = derive2 { name="simpleaffy"; version="2.66.0"; sha256="04a11dsqd5y4b39nny94acnh0qhdazjc6d1803izza4vrgmw2csb"; depends=[affy Biobase BiocGenerics gcrma genefilter]; }; + simplifyEnrichment = derive2 { name="simplifyEnrichment"; version="1.0.0"; sha256="1bgdvmjwgvrv0fjxifnazrm3x2yxvp3d1cv9hjnrw4073r91k5kv"; depends=[AnnotationDbi BiocGenerics circlize clue cluster ComplexHeatmap digest GetoptLong GO_db GOSemSim Matrix org_Hs_eg_db proxyC slam tm]; }; + simulatorZ = derive2 { name="simulatorZ"; version="1.24.0"; sha256="0dinl5m33hwykf0kbzj5dg7kriy3bhkq5rh5q3wkg4nbbplagzvg"; depends=[Biobase BiocGenerics gbm GenomicRanges Hmisc SummarizedExperiment survival]; }; + sincell = derive2 { name="sincell"; version="1.22.0"; sha256="1na3pxqx3cxy9mh9v7lmlz1nrcmkfhz7i7b98mbmlj26rm15gr83"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; + singleCellTK = derive2 { name="singleCellTK"; version="2.0.0"; sha256="0sgx80qx9a1kf1d634yci6m33gp5pi21vffs2rincbilxj8832y0"; depends=[AnnotationDbi ape batchelor Biobase BiocGenerics BiocParallel celda circlize cluster colorspace colourpicker ComplexHeatmap cowplot data_table DelayedArray DelayedMatrixStats DESeq2 dplyr DropletUtils DT enrichR ExperimentHub fields ggplot2 ggplotify ggrepel ggtree gridExtra GSEABase GSVA GSVAdata igraph kableExtra KernSmooth limma magrittr MAST Matrix matrixStats msigdbr multtest plotly R_utils RColorBrewer reshape2 reticulate rmarkdown ROCR Rtsne S4Vectors scater scDblFinder scds scMerge scran scRNAseq Seurat shiny shinyalert shinyBS shinycssloaders shinyFiles shinyjqui shinyjs shinythemes shinyWidgets SingleCellExperiment SummarizedExperiment sva TENxPBMCData uwot withr yaml zinbwave]; }; + singscore = derive2 { name="singscore"; version="1.10.0"; sha256="1k4p5b8hkhgnrk81jkhc83fapkxb4wzipwfh4jafqmhmcmnd866r"; depends=[Biobase BiocParallel edgeR ggplot2 ggrepel GSEABase magrittr matrixStats plotly plyr RColorBrewer reshape reshape2 S4Vectors SummarizedExperiment tidyr]; }; + sitePath = derive2 { name="sitePath"; version="1.6.6"; sha256="1f7szv8pcdvngrfhs0xbhsvw9wf649d6v5qgaw6mkjyvnc3lz31i"; depends=[ape aplot ggplot2 ggrepel ggtree gridExtra RColorBrewer Rcpp seqinr tidytree]; }; + sizepower = derive2 { name="sizepower"; version="1.60.0"; sha256="1xszmlm4yakdwwh64f1z54bdy8x3mwh1f0gdvyhrh5admnmmxra3"; depends=[]; }; + skewr = derive2 { name="skewr"; version="1.22.0"; sha256="1x5nljxq52higdgfgv1ga7amcl53yv7kwmhrvrmp4ad60rvnziln"; depends=[IlluminaHumanMethylation450kmanifest methylumi minfi mixsmsn RColorBrewer S4Vectors wateRmelon]; }; + slalom = derive2 { name="slalom"; version="1.12.0"; sha256="1ddjyrwjrg3rq8f9wvkmx4sa1m5wdgzxy88yhrf6zvd6qgj57sxf"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; }; + slingshot = derive2 { name="slingshot"; version="1.8.0"; sha256="0sz4frlk7c1g8adyfcgi1mf1xsf9n5zib4bw7j9kl711dbhvkqwl"; depends=[ape igraph matrixStats princurve SingleCellExperiment SummarizedExperiment]; }; + slinky = derive2 { name="slinky"; version="1.8.0"; sha256="1dflkximva1m1c02j3r9105c81za2n1nb0y41pflw3sfy5ylrknw"; depends=[curl dplyr foreach httr jsonlite readr rhdf5 SummarizedExperiment tidyr]; }; + snapCGH = derive2 { name="snapCGH"; version="1.60.0"; sha256="0k5y73zkf4lmnl27dqkrws6i5agdjr8lna1ii8cfxgjfppdkm7f5"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; + snapcount = derive2 { name="snapcount"; version="1.2.0"; sha256="1bbvb9z7023429rhxzhpjzvf6j739r8sbx7vsg0l65m9cyvxc273"; depends=[assertthat data_table GenomicRanges httr IRanges jsonlite magrittr Matrix purrr R6 rlang stringr SummarizedExperiment]; }; + snifter = derive2 { name="snifter"; version="1.0.0"; sha256="1r1ymd68rrhdpzll994k08xg0mwqrm2qa06zk3rck3s51bbi6xzw"; depends=[assertthat basilisk reticulate]; }; + snm = derive2 { name="snm"; version="1.38.0"; sha256="11864fg62wl318xzlpfmhlj6bgxcbzf9vhwqm27srsjjds5dkwp5"; depends=[corpcor lme4]; }; + snpStats = derive2 { name="snpStats"; version="1.40.0"; sha256="1298a71swwav53yf9kfqkdpach3818plqcbw0lgb6sibs8y8ff24"; depends=[BiocGenerics Matrix survival zlibbioc]; }; + soGGi = derive2 { name="soGGi"; version="1.22.0"; sha256="1sp93fhhk8caknb88336mhqk14jn1ivdiph8g3lrss899rgi6013"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + sojourner = derive2 { name="sojourner"; version="1.4.2"; sha256="09yp7yxrv8gz6rxb81m6262ykx9bi1s3nvww6g4x53aw7s2swfgy"; depends=[dplyr EBImage fitdistrplus ggplot2 gridExtra lattice MASS mclust minpack_lm mixtools mltools nls2 pixmap plyr R_matlab Rcpp reshape2 rlang sampSurf scales shiny shinyjs sp truncnorm]; }; + sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.14.0"; sha256="00fy86lzvdjvcd1vz8pk7j4j07kdfl7v08hr8pdj8bmslkyldajs"; depends=[MASS MCMCpack optparse tmvtnorm]; }; + sparseMatrixStats = derive2 { name="sparseMatrixStats"; version="1.2.1"; sha256="01gnmy9zqd0ygm40vqkmqmiwfqmdawj4m81dysmmcdm7z80rn9ii"; depends=[Matrix MatrixGenerics matrixStats Rcpp]; }; + sparsenetgls = derive2 { name="sparsenetgls"; version="1.8.0"; sha256="18wnm5q4ycmgl9vvnsfglqbfgbnpv7rn4dd5c64p6h219cbr8791"; depends=[glmnet huge MASS Matrix]; }; + spatialHeatmap = derive2 { name="spatialHeatmap"; version="1.0.0"; sha256="1wrisbmar5535zqwqljnaj578ja7xy006wbj2qi9mdr9gg84lkb1"; depends=[av DESeq2 dynamicTreeCut edgeR flashClust genefilter ggdendro ggplot2 ggplotify gplots gridExtra grImport htmlwidgets igraph plotly rols rsvg shiny shinydashboard SummarizedExperiment visNetwork WGCNA xml2 yaml]; }; + specL = derive2 { name="specL"; version="1.24.0"; sha256="0iph266rdsbcvvrs90bnzj49576vnrxc0lv75v9szs5dfa9hqwxw"; depends=[DBI protViz RSQLite seqinr]; }; + spicyR = derive2 { name="spicyR"; version="1.2.1"; sha256="0pwshbrj4q1ivxjabf0q9pki1a9bfyn6swnqjzmnjbpcjw40rks0"; depends=[BiocGenerics BiocParallel concaveman data_table dplyr ggplot2 IRanges lme4 lmerTest mgcv pheatmap rlang S4Vectors spatstat_core spatstat_geom tidyr]; }; + spikeLI = derive2 { name="spikeLI"; version="2.50.0"; sha256="134x43n70jyc1xsinjv7brn687h3pzqav82vamk2xdvis4zsaax2"; depends=[]; }; + spkTools = derive2 { name="spkTools"; version="1.46.0"; sha256="0v78dw4yvchldm49yx56r2gwk1fxy56j6r5mgfiqn0lzh4xw5295"; depends=[Biobase gtools RColorBrewer]; }; + splatter = derive2 { name="splatter"; version="1.14.1"; sha256="1bwqr13wgw74vh89qpcccgmr945w1qhs3i1cyxzndsahkbq2fgq7"; depends=[BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus ggplot2 locfit matrixStats S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; }; + splineTimeR = derive2 { name="splineTimeR"; version="1.18.0"; sha256="10la4n15mymm1ac4p5kkn6xw3g7i26yylbws7xgw147ny6x1i8lr"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; + splots = derive2 { name="splots"; version="1.56.0"; sha256="19g57dsvwnm8c913wn0pz8wfvr6a376kcrhbb7rk12ca642n9clq"; depends=[RColorBrewer]; }; + spqn = derive2 { name="spqn"; version="1.2.0"; sha256="11jzmpsxc8d59l1hhilsiddfxzjq3m3bpg4lr6r7g2wv6g38w2rd"; depends=[BiocGenerics ggplot2 ggridges matrixStats SummarizedExperiment]; }; + srnadiff = derive2 { name="srnadiff"; version="1.10.1"; sha256="154pn428dn0i45h5jwvaks9hvkjf1vdangvwdxh13r05bvdxrwbj"; depends=[BiocManager BiocParallel BiocStyle DESeq2 devtools GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + ssPATHS = derive2 { name="ssPATHS"; version="1.4.0"; sha256="1y22c6vswchcl242sszrz5gary0i00zzngd2msm3c0gx13kvn0ip"; depends=[dml MESS ROCR SummarizedExperiment]; }; + sscore = derive2 { name="sscore"; version="1.62.0"; sha256="16x9yzkz2v81agxgg0q1zlflrnqqnfk7qqz94y662xd5g6dcn1qz"; depends=[affy affyio]; }; + sscu = derive2 { name="sscu"; version="2.20.0"; sha256="00v8z8ypj6ssk7qmg97klczrfz1lsw3i8y28p7jn8q7iym1kip5p"; depends=[BiocGenerics Biostrings seqinr]; }; + ssize = derive2 { name="ssize"; version="1.64.0"; sha256="0bygj6pds2nsbxxnx86ca6484b20ywspbv7d891ms23bsrz7p5wf"; depends=[gdata xtable]; }; + ssrch = derive2 { name="ssrch"; version="1.6.0"; sha256="0dxmwb0xrdc3hv33h4jr4fsfbybjl69940l1bfwglq7ip8nvg5cj"; depends=[DT shiny]; }; + ssviz = derive2 { name="ssviz"; version="1.24.0"; sha256="1pi3mm4xbna6pawhdx38bmjbbq0wipm69xh9lqa3ma34069jxxkn"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; + staRank = derive2 { name="staRank"; version="1.32.0"; sha256="0kqw9rp00z6g65jb80ypb3801sqdcvv7nafclmajrhrzdp109hc2"; depends=[cellHTS2]; }; + stageR = derive2 { name="stageR"; version="1.12.0"; sha256="18c84a9iwl1vzsnz0wj4g6f0dkxzvxxc7dvb94grnqd7vcspjzmm"; depends=[SummarizedExperiment]; }; + statTarget = derive2 { name="statTarget"; version="1.20.0"; sha256="0c5wg2fyrzaqjw6xi2hypfyy9ffy677p6vavhdwdf7yf7qahk552"; depends=[impute pdist pls plyr randomForest ROC rrcov]; }; + stepNorm = derive2 { name="stepNorm"; version="1.62.0"; sha256="0afdy09xjshlmyyzmhpzhxvqlbccccivs2dkc1vb6h9q2jj2qisc"; depends=[marray MASS]; }; + strandCheckR = derive2 { name="strandCheckR"; version="1.8.0"; sha256="1z92xxbhf7a037dwhnqgnidk79i1iw260s543zalrydf336qd0gf"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges magrittr reshape2 Rsamtools S4Vectors stringr TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + struct = derive2 { name="struct"; version="1.2.0"; sha256="0xw9ajm5n47qi6d2n4km37p963acijk7s2b76ig649zil5092nkd"; depends=[knitr ontologyIndex S4Vectors SummarizedExperiment]; }; + structToolbox = derive2 { name="structToolbox"; version="1.2.0"; sha256="1cpqfy3hhkv21kmxa55dd6yn2gi5vqch0c8dnxs5i511p9q9bq81"; depends=[ggplot2 ggthemes gridExtra scales sp struct]; }; + subSeq = derive2 { name="subSeq"; version="1.20.0"; sha256="1yvzx5rygbwvkcva4kcac5rain4sflwyxkl535azndqs1qacdmvy"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; + supraHex = derive2 { name="supraHex"; version="1.28.2"; sha256="1wxx4f1bfmhvbfnc69i9hh7nhjsm8g0mlxf3h13gc997l9376q52"; depends=[ape dplyr hexbin igraph magrittr MASS purrr readr stringr tibble tidyr]; }; + survcomp = derive2 { name="survcomp"; version="1.40.0"; sha256="05nn7jrapcc3zk2vbrdmpyb6jiqq4p0asadc6dbbg80v5n0cga20"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; + survtype = derive2 { name="survtype"; version="1.6.1"; sha256="05q72hkgbxw4la2ni443a2r63jn9sn2dpmnfbanc1k43w6kx6f3r"; depends=[clustvarsel pheatmap SummarizedExperiment survival survminer]; }; + sva = derive2 { name="sva"; version="3.38.0"; sha256="1hpzzg3qrgkd8kwg1m5gq94cikjgk9j4l1wk58fxl49s6fmd13zy"; depends=[BiocParallel edgeR genefilter limma matrixStats mgcv]; }; + swfdr = derive2 { name="swfdr"; version="1.16.0"; sha256="139zg731r01jwwswlqnha1k97np5rm0w93rwx73v3yzamk0n85gr"; depends=[]; }; + switchBox = derive2 { name="switchBox"; version="1.26.0"; sha256="10n3msrwcv58swcgf6pdsxpx6acy7sd875qmdjgj9457rv6mqd9r"; depends=[gplots pROC]; }; + switchde = derive2 { name="switchde"; version="1.16.0"; sha256="07fk7gfd6g57j7xb081rjw248gj8g216vccx42aql4djywg4p6qx"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; }; + synapter = derive2 { name="synapter"; version="2.14.0"; sha256="058glxas17cs59l11ws8fnipbd771y6b5bkk92y7ky8p7b4bj14p"; depends=[Biobase Biostrings cleaver knitr lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; }; + synergyfinder = derive2 { name="synergyfinder"; version="2.4.16"; sha256="0nrd5zxrf28j7ash9pabnz2ky4av0hr0k2rwhg14scz6x8ci3zzg"; depends=[dplyr drc furrr future ggforce ggplot2 ggrepel gstat kriging lattice magrittr metR mice nleqslv pbapply plotly purrr reshape2 sp SpatialExtremes stringr tidyr tidyverse vegan]; }; + synlet = derive2 { name="synlet"; version="1.20.0"; sha256="0aya9wlh0lg82cv8l47hvhqa6zdvmzh5p8ir9gh1mh1fmhfw4qr9"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; + systemPipeR = derive2 { name="systemPipeR"; version="1.24.6"; sha256="05qnn105gm423fka4kb84vpgzjmz1py6mxpfa2agwwmc5v012qbp"; depends=[annotate assertthat batchtools Biostrings DESeq2 DOT edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats IRanges limma magrittr pheatmap rjson Rsamtools rsvg ShortRead stringr SummarizedExperiment VariantAnnotation yaml]; }; + systemPipeShiny = derive2 { name="systemPipeShiny"; version="1.0.20"; sha256="0pcr163k1i6mrmi7cdm3k02l46xh3lkjpqdg0cax54bnxzq0xgfr"; depends=[assertthat bsplus crayon dplyr drawer DT ggplot2 glue magrittr plotly rlang rstudioapi shiny shinyAce shinydashboard shinydashboardPlus shinyFiles shinyjqui shinyjs shinytoastr shinyWidgets spsComps spsUtil stringr styler tibble vroom yaml]; }; + tRNA = derive2 { name="tRNA"; version="1.8.0"; sha256="1fl5c77cz1iygyv5zvn5asm4w7x4bd4b575m1200zkpamlpxidz1"; depends=[BiocGenerics Biostrings GenomicRanges ggplot2 IRanges Modstrings S4Vectors scales stringr Structstrings XVector]; }; + tRNAdbImport = derive2 { name="tRNAdbImport"; version="1.8.0"; sha256="1zgalf1bx8ylfcydjbyg4wcmj0hhpzn7lf3dqwrw3d7z68brjcy7"; depends=[BiocGenerics Biostrings GenomicRanges httr IRanges Modstrings S4Vectors stringr Structstrings tRNA xml2]; }; + tRNAscanImport = derive2 { name="tRNAscanImport"; version="1.10.0"; sha256="0qrwyk6k5mbz5jac0gg9va0hayh7m84kx073ywphwaasljpp6wla"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors stringr Structstrings tRNA XVector]; }; + tRanslatome = derive2 { name="tRanslatome"; version="1.28.0"; sha256="0ws6wmf6f9b8bfhmikqca8bnichx0marz0bniqxcpy6dk3z26r8a"; depends=[anota Biobase edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd sigPathway topGO]; }; + target = derive2 { name="target"; version="1.4.0"; sha256="1xbk35a8x3w2jrmbrjhxbm14x14w9hxqw2vpc4biqma6ax6sybrs"; depends=[BiocGenerics GenomicRanges IRanges matrixStats shiny]; }; + tenXplore = derive2 { name="tenXplore"; version="1.12.0"; sha256="11jk6xa5if9iwkvf5nc58j4lm7dj6qvqsk12d7n5ci3c1naxzwd5"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; }; + ternarynet = derive2 { name="ternarynet"; version="1.34.0"; sha256="029n29z1y4wsc24hvqhbx9fqrxpplvaz39rniibrwjr0nac9gjn5"; depends=[igraph]; }; + tidySingleCellExperiment = derive2 { name="tidySingleCellExperiment"; version="1.0.0"; sha256="1nxcdrjghikvdwfjiirnrvck5f2fr13vh9qlcyqr56krr4jbcbqw"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang S4Vectors SingleCellExperiment stringr tibble tidyr tidyselect]; }; + tidySummarizedExperiment = derive2 { name="tidySummarizedExperiment"; version="1.0.0"; sha256="0yfv6zjlc908dmddw9r9zjj1rld2n4wianwvc24i383dhgr901ys"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr tidyselect]; }; + tidybulk = derive2 { name="tidybulk"; version="1.2.1"; sha256="0vp4nvk8d27clh4nkddj15awzfdd9j60fdps36zdg5lzjqc412sj"; depends=[dplyr lifecycle magrittr preprocessCore purrr readr rlang scales stringr SummarizedExperiment tibble tidyr]; }; + tigre = derive2 { name="tigre"; version="1.44.0"; sha256="06jj0hjjn8iqfqdfpp5bbkd5mqwmvrf8pns86ncbzjpjd9h6jfmq"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; + tilingArray = derive2 { name="tilingArray"; version="1.68.0"; sha256="089sqin78rqy53mjzwahm1jnxjaw2l4qc7bzgg1lhsvf0y9ldqgz"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; + timeOmics = derive2 { name="timeOmics"; version="1.2.0"; sha256="0fc3g0p02wahssskj56c2f8kgz4ix5jdlyksfwla38gxgznsngvr"; depends=[dplyr ggplot2 ggrepel lmtest magrittr mixOmics propr purrr stringr tibble tidyr]; }; + timecourse = derive2 { name="timecourse"; version="1.62.0"; sha256="0zwsgdbf1861zkfi05rxykbm1k1himgg3hfaxrkk9wa55g938bxv"; depends=[Biobase limma marray MASS]; }; + timescape = derive2 { name="timescape"; version="1.14.0"; sha256="14fyailm0i6wsm2jwa57q30a6vy1s1xlwicnbd5kn5c2wkdai7ng"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; }; + tkWidgets = derive2 { name="tkWidgets"; version="1.68.0"; sha256="1vqgrzz85d0i38g6cd8kghi7b1a8v4i0nfxlqsgjd18rsnhjpwyi"; depends=[DynDoc widgetTools]; }; + tofsims = derive2 { name="tofsims"; version="1.18.0"; sha256="07h5vz27mpvgjqhdmdn3hi36xi0x0g4ljsqi7rbidm614f2w24ng"; depends=[ALS alsace KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; + tomoda = derive2 { name="tomoda"; version="1.0.0"; sha256="1hqraav10ag3cw4j6ynq7pinkvs8xzr0n2yizk6lmy6y7db9mwa9"; depends=[ggplot2 ggrepel RColorBrewer reshape2 Rtsne SummarizedExperiment umap]; }; + topGO = derive2 { name="topGO"; version="2.42.0"; sha256="0vr3l9gvd3dhy446k3fkj6rm7z1abxi56rbnrs64297yzxaz1ngl"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; + topconfects = derive2 { name="topconfects"; version="1.6.0"; sha256="01679vrs3iwdcpclfdr7i2znl0n5pmp8wpw8rdk5c54x20w4znin"; depends=[assertthat ggplot2]; }; + topdownr = derive2 { name="topdownr"; version="1.12.0"; sha256="1ridl9a3bwx952abwgn4b3ihd1nw1fhi50wpy8zjz9cww5z2zah7"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR ProtGenerics S4Vectors]; }; + trackViewer = derive2 { name="trackViewer"; version="1.26.2"; sha256="10gpl2n0cly0bi0pjw8kqg7mf16dibc451gsw1ry4cvvh7mra1fd"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph grImport Gviz htmlwidgets InteractionSet IRanges plotrix Rgraphviz Rsamtools rtracklayer S4Vectors scales]; }; + tracktables = derive2 { name="tracktables"; version="1.24.0"; sha256="1ny6yvj1c19gqk0zc0cf6xjdq9in9km1fz2j7sw89nsrdjvlzahz"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; }; + tradeSeq = derive2 { name="tradeSeq"; version="1.4.0"; sha256="1ncmvn9kaksismvsjs042xsp8bfq1xnm0ds87dwpk95bnpj96a89"; depends=[Biobase BiocParallel edgeR ggplot2 igraph magrittr Matrix matrixStats mgcv monocle pbapply princurve RColorBrewer S4Vectors SingleCellExperiment slingshot SummarizedExperiment tibble viridis]; }; + transcriptR = derive2 { name="transcriptR"; version="1.18.0"; sha256="1rclir0fss5ln38jn1i9kggbnq7amqsfn3wlhmgv854pkgiv61hz"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; + transcriptogramer = derive2 { name="transcriptogramer"; version="1.12.0"; sha256="03rh2pypsrwls500vjv11nwmd179bg016y4chfr176cygskn66sf"; depends=[biomaRt data_table doSNOW foreach ggplot2 igraph limma progress RedeR snow tidyr topGO]; }; + transite = derive2 { name="transite"; version="1.8.0"; sha256="1z1j9nm6ykqrivhvz1y4543rrksq499zhmfjanm6prbaisw21wnh"; depends=[BiocGenerics Biostrings dplyr GenomicRanges ggplot2 ggseqlogo gridExtra Rcpp scales TFMPvalue]; }; + transomics2cytoscape = derive2 { name="transomics2cytoscape"; version="1.0.0"; sha256="1m5zjp9n753qyb93p293m22hd9r260ncm20bpnjfgghiabl2fyr8"; depends=[dplyr KEGGREST RCy3]; }; + traseR = derive2 { name="traseR"; version="1.20.0"; sha256="02sv8dsd6z154wi39fq8hhnicw4sf1gk3n27l179c4sxh6svf58z"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; + treeio = derive2 { name="treeio"; version="1.14.4"; sha256="1x8m5mazlz6wvyzn3hvwsyfz3ma6s5sq3ig2k8qh9039sla0irsy"; depends=[ape dplyr jsonlite magrittr rlang tibble tidytree]; }; + trena = derive2 { name="trena"; version="1.12.1"; sha256="0jasvlnzkv2a5mnkzmmzmqrl822dpj5q6bf7h6m2z9i2p42xp60d"; depends=[AnnotationDbi BiocParallel biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RMySQL RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 vbsr xgboost]; }; + trigger = derive2 { name="trigger"; version="1.36.0"; sha256="0cdb7sq2w188jdqvml045d3yjr535jpbnvbllnlkpi1vrdlmcqir"; depends=[corpcor qtl qvalue sva]; }; + trio = derive2 { name="trio"; version="3.28.0"; sha256="0vh4xsp766vjigklqz6hlbh2a1l2bpg8r0mn3zj483v5pfqrmbnh"; depends=[LogicReg siggenes survival]; }; + triplex = derive2 { name="triplex"; version="1.30.0"; sha256="0mmz4ahkkqfdy6yswsng2kpiy456wg1a09gnvqjail5dp08si4pm"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; }; + tscR = derive2 { name="tscR"; version="1.2.0"; sha256="1f2lbnldb07ls1nf6aahgh7xc4b9r7aq66plzrvang2jwpzcijyh"; depends=[class cluster dplyr dtw GenomicRanges ggplot2 gridExtra IRanges kmlShape knitr latex2exp prettydoc RColorBrewer rmarkdown S4Vectors SummarizedExperiment]; }; + tspair = derive2 { name="tspair"; version="1.48.0"; sha256="0qjy7zvnz5v71jv11sk3pjlycv5ajzalr0c5w4mcvvc43lyj9151"; depends=[Biobase]; }; + tweeDEseq = derive2 { name="tweeDEseq"; version="1.36.0"; sha256="1gzd0wlr3jyvvcxrybxh4yxd3591vpzwr25bkfz81bqj3lmq9f67"; depends=[cqn edgeR limma MASS]; }; + twilight = derive2 { name="twilight"; version="1.66.0"; sha256="1ca2mfppjdmj04s71vmnxjqva2i0d4gj8sm3l1kv0packd7nl15d"; depends=[Biobase]; }; + twoddpcr = derive2 { name="twoddpcr"; version="1.14.0"; sha256="05wa20jrf3mzli95xmivsvd10j82i05hdfqddjnral540v4jr8ki"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; }; + tximeta = derive2 { name="tximeta"; version="1.8.5"; sha256="0ki1rl43df9yx99h0yivj8nhwq6bkhzlvb15crfckxivivp0dmwr"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings ensembldb GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite Matrix rappdirs S4Vectors SummarizedExperiment tibble tximport]; }; + tximport = derive2 { name="tximport"; version="1.18.0"; sha256="1nxnlvl4iv2392xa72j0lzy2xnb3vrvyhfrdj9l54znwkrryyq34"; depends=[]; }; + uSORT = derive2 { name="uSORT"; version="1.16.0"; sha256="075p35g4jbiky769db6rvz7y6spi1qs3j8j2yqnyk9lyi9qk2qy4"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; }; + uncoverappLib = derive2 { name="uncoverappLib"; version="1.0.0"; sha256="0v3idx22qizcwd8xyxd0cjnnsbwxwrb1hks403bbyyk002x2j9ij"; depends=[BiocFileCache BSgenome_Hsapiens_UCSC_hg19 condformat DT EnsDb_Hsapiens_v75 EnsDb_Hsapiens_v86 GenomicRanges Gviz Homo_sapiens markdown openxlsx org_Hs_eg_db OrganismDbi processx rappdirs rlist Rsamtools shiny shinyBS shinycssloaders shinyjs shinyWidgets stringr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.26.0"; sha256="1ad5a7gy43l8x1rf5lgqiy2bv6fgah7cbnp4lrqwshphlnr30ndv"; depends=[BiocGenerics HTqPCR]; }; + universalmotif = derive2 { name="universalmotif"; version="1.8.5"; sha256="07862bs771xldmdnq0zr8926dr299ach8nrgci14p5bbrc88l3ly"; depends=[BiocGenerics Biostrings ggplot2 ggseqlogo IRanges MASS Rcpp RcppThread Rdpack rlang S4Vectors yaml]; }; + variancePartition = derive2 { name="variancePartition"; version="1.20.0"; sha256="0fisaqd5v8xy9rz9l1zs62k1n2h4k1irzgwj46ci947l52x1qhah"; depends=[Biobase BiocParallel colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 lmerTest MASS pbkrtest progress reshape2 scales]; }; + vasp = derive2 { name="vasp"; version="1.2.4"; sha256="1gl0xdlw51an3ir6hgjqjjbbyfwa9lyqy0330xyii83lfyiqyadw"; depends=[ballgown cluster GenomeInfoDb GenomicAlignments GenomicRanges IRanges matrixStats Rsamtools S4Vectors Sushi]; }; + vbmp = derive2 { name="vbmp"; version="1.58.0"; sha256="16my3zfhj14fv7wzc4s0wzffvkgnjv29ndv4jshl5zw4l7hkaxga"; depends=[]; }; + velociraptor = derive2 { name="velociraptor"; version="1.0.0"; sha256="1cnxxa5lffmhjxzifa163kbayxpnibln44vzmjgrzli422fxfysa"; depends=[basilisk BiocGenerics BiocParallel BiocSingular DelayedArray Matrix reticulate S4Vectors scuttle SingleCellExperiment SummarizedExperiment zellkonverter]; }; + vidger = derive2 { name="vidger"; version="1.10.0"; sha256="19bjrgwgfgrzdv0p06fwqdxj3lwmbadij89pwga6288qq1xlwpvx"; depends=[Biobase DESeq2 edgeR GGally ggplot2 ggrepel knitr RColorBrewer rmarkdown scales SummarizedExperiment tidyr]; }; + viper = derive2 { name="viper"; version="1.24.0"; sha256="17fk1a42hkdp25g2m50dhlgbzfvm666v7fjx29ylqia6rbfs98ai"; depends=[Biobase e1071 KernSmooth mixtools]; }; + vsn = derive2 { name="vsn"; version="3.58.0"; sha256="0dfrfflidpnphwyqzmmfiz9blfqv6qa09xlwgfabhpfsf3ml2rlb"; depends=[affy Biobase ggplot2 lattice limma]; }; + vtpnet = derive2 { name="vtpnet"; version="0.30.0"; sha256="096s73kk46bpavmp0kv54k3l0mcw2kqw6saci4w10daqxah7bqgv"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; + vulcan = derive2 { name="vulcan"; version="1.12.0"; sha256="0rynj1y2vdwc9wkz5rzsza9ip9sjwcdz7cx9hw16296gln3rdczn"; depends=[Biobase caTools ChIPpeakAnno csaw DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; }; + waddR = derive2 { name="waddR"; version="1.4.0"; sha256="13gm4nlla4qwfqfah12p5rb6hmlgk3zkb0k25ampj8x9rbkyhxhv"; depends=[arm BiocFileCache BiocParallel Rcpp RcppArmadillo SingleCellExperiment]; }; + wateRmelon = derive2 { name="wateRmelon"; version="1.34.0"; sha256="1sc2nxg9bafpvlwqhky2p5b6fkimkk9v3xcab9kvwnj6szrb6p3f"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; + wavClusteR = derive2 { name="wavClusteR"; version="2.24.0"; sha256="18cg0jbr3rjyx31wwyag1n5gams55pbd2rvb99i3g80q9hvswawi"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr]; }; + weaver = derive2 { name="weaver"; version="1.56.0"; sha256="18b4q7m917na2zfdv0gn1gh6zvb3q92gxmrx2br9v48zzm3nygl4"; depends=[codetools digest]; }; + webbioc = derive2 { name="webbioc"; version="1.62.0"; sha256="1nnmr4ddi07x7sy89fgdn7iwz5k4l8n5ca3xjnlbpwxycza793vj"; depends=[affy annaffy Biobase BiocManager gcrma multtest qvalue vsn]; }; + weitrix = derive2 { name="weitrix"; version="1.2.0"; sha256="0wjwxwarqfax8fm0nbgmmmw2zfj3vv45lgap89cg88zxcd5zwck3"; depends=[assertthat BiocGenerics BiocParallel Ckmeans_1d_dp DelayedArray DelayedMatrixStats dplyr ggplot2 glm2 limma purrr reshape2 RhpcBLASctl rlang S4Vectors scales SummarizedExperiment topconfects]; }; + widgetTools = derive2 { name="widgetTools"; version="1.68.0"; sha256="172f0pmsspd9lss557cmxzjfsbansimjyhwdiahg8pqrayhwvf2w"; depends=[]; }; + wiggleplotr = derive2 { name="wiggleplotr"; version="1.14.0"; sha256="1k4wlh5ayb1w4dr6dydqfgm3415qhsfmshmi6zjyyhhkd2626vad"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; }; + wpm = derive2 { name="wpm"; version="1.0.0"; sha256="1hhjycqqn4g0ig672dy0760khzv36c6wsffkjpwd3fbm5kzdlrdz"; depends=[Biobase cli config dplyr DT ggplot2 golem logging RColorBrewer rlang shiny shinycustomloader shinydashboard shinyWidgets stringr SummarizedExperiment]; }; + xcms = derive2 { name="xcms"; version="3.12.0"; sha256="17kyybj093mj0g2sbfmjp19mmkww4w025n6zc0hbznqb94vkc8fv"; depends=[Biobase BiocGenerics BiocParallel IRanges lattice MassSpecWavelet MsCoreUtils MSnbase mzR plyr ProtGenerics RANN RColorBrewer robustbase S4Vectors SummarizedExperiment]; }; + xmapbridge = derive2 { name="xmapbridge"; version="1.48.0"; sha256="08k57pywggpsyi913cv68qdjszhl73qr50misbgsg5xcq0zklxji"; depends=[]; }; + xps = derive2 { name="xps"; version="1.50.0"; sha256="1drcbg22zks5payr2gcy7mxs63ic48bxs18dwz7807dm25qlja73"; depends=[]; }; + yamss = derive2 { name="yamss"; version="1.16.0"; sha256="0cxzn7j9apjcabbvvii16kn4whwd9khcyz867w5ag3zdxwvg7l7w"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; }; + yaqcaffy = derive2 { name="yaqcaffy"; version="1.50.0"; sha256="18gphcjj15iivrahp52186bvdg07yd2dvrykfjdd4r1vyf33im96"; depends=[simpleaffy]; }; + yarn = derive2 { name="yarn"; version="1.16.0"; sha256="0p8wz5jn601vxbbxkm73ps3fx0j1y56nr2qf6y8k80vgrk7bv5gp"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; }; + zFPKM = derive2 { name="zFPKM"; version="1.12.0"; sha256="1sa7m7mzzr92c9ickial5701414rab233lq1il1sm9yfdkf8s9fm"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; }; + zellkonverter = derive2 { name="zellkonverter"; version="1.0.3"; sha256="0np73kmcqj2i1rg0cdk7bpka5f6fjsfzal580f0wigzrjngryjra"; depends=[basilisk DelayedArray Matrix reticulate S4Vectors SingleCellExperiment SummarizedExperiment]; }; + zinbwave = derive2 { name="zinbwave"; version="1.12.0"; sha256="0m5f0wrk6kg88m41cchjwi4ssi7kr3196m8h9hrhygak964nsd4q"; depends=[BiocParallel edgeR genefilter Matrix SingleCellExperiment softImpute SummarizedExperiment]; }; + zlibbioc = derive2 { name="zlibbioc"; version="1.36.0"; sha256="0m36ddss0znvm19dhnxcclxjhgjplw8ajk8v419h20ab8an6khxg"; depends=[]; }; } diff --git a/third_party/nixpkgs/pkgs/development/r-modules/cran-packages.nix b/third_party/nixpkgs/pkgs/development/r-modules/cran-packages.nix index f579b108eb..25c945c29f 100644 --- a/third_party/nixpkgs/pkgs/development/r-modules/cran-packages.nix +++ b/third_party/nixpkgs/pkgs/development/r-modules/cran-packages.nix @@ -4,7 +4,7 @@ # Rscript generate-r-packages.R cran >new && mv new cran-packages.nix { self, derive }: -let derive2 = derive { snapshot = "2020-12-31"; }; +let derive2 = derive { snapshot = "2021-05-05"; }; in with self; { A3 = derive2 { name="A3"; version="1.0.0"; sha256="017hq9pjsv1h9i7cqk5cfx27as54shlhdsdvr6jkhb8jfkpdb6cw"; depends=[pbapply xtable]; }; AATtools = derive2 { name="AATtools"; version="0.0.1"; sha256="08is383xhs2lc9wfffykcwqyl8mwcxfpk3lnvlpkp96hq9m9ikbf"; depends=[doParallel dplyr foreach magrittr]; }; @@ -16,7 +16,6 @@ in with self; { ABHgenotypeR = derive2 { name="ABHgenotypeR"; version="1.0.1"; sha256="08cpmnaaxsm5c5bjifnfxdlvg5inrf13biqpcl2yq5zpqjmiki0l"; depends=[ggplot2 reshape2]; }; ABPS = derive2 { name="ABPS"; version="0.3"; sha256="0n3f66nmfi5v94il1mxy026mi84w01ph2aljk60vn3mrz8kwf2ll"; depends=[kernlab]; }; ACA = derive2 { name="ACA"; version="1.1"; sha256="1i3hm27nvnkvc39xlh0d1blq8q0q02czmvgi3cazmjx3jvxay0vq"; depends=[]; }; - ACCLMA = derive2 { name="ACCLMA"; version="1.0"; sha256="1na27sp18fq12gp6vxgqw1ffsz2yi1d8xvrxbrzx5g1kqxrayy0v"; depends=[]; }; ACD = derive2 { name="ACD"; version="1.5.3"; sha256="1a67bi3hklq8nlc50r0qnyr4k7m9kpvijy8sqqpm54by5hsysfd6"; depends=[]; }; ACDm = derive2 { name="ACDm"; version="1.0.4"; sha256="0b4f02ga5ra66mbrm79g0bnlzmii82rks9kmxixxqgf18yhlyjil"; depends=[dplyr ggplot2 plyr Rsolnp zoo]; }; ACEsearch = derive2 { name="ACEsearch"; version="1.0.0"; sha256="1ssq8avj20dk2mal0j5dvshf7qgk0as90sgl71cn91cq8lbiilpn"; depends=[httr testthat]; }; @@ -32,9 +31,10 @@ in with self; { ADMM = derive2 { name="ADMM"; version="0.3.2"; sha256="0wxjl9pdrcrbbcl1vq48ajgqdm2m1ymaf5xcnr5sf44v50lxyqic"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo Rdpack]; }; ADMMnet = derive2 { name="ADMMnet"; version="0.1.1"; sha256="1la92fwg75ylqbz00znqd0rhv5r509kgh9wwznjacppif773wp6i"; depends=[Matrix Rcpp RcppEigen]; }; ADMMsigma = derive2 { name="ADMMsigma"; version="2.1"; sha256="1943dza086s22pr0yz41wzn9cdg11x7fl9zr3w012865yj219m7l"; depends=[doParallel dplyr foreach ggplot2 Rcpp RcppArmadillo RcppProgress]; }; - ADMUR = derive2 { name="ADMUR"; version="1.0.1"; sha256="1h32vm2gs95dd339b0v7nxspig04m13wvpyri94ngcz70gl9sa79"; depends=[mathjaxr scales zoo]; }; + ADMUR = derive2 { name="ADMUR"; version="1.0.3"; sha256="1wv5frav8vjkvsqwng9zddajmb7rdm4iqrikw9cjpqdpk7njl8ph"; depends=[mathjaxr scales zoo]; }; ADPF = derive2 { name="ADPF"; version="0.0.1"; sha256="1n7302xx77ngvp9i2h582i1mqslzllcdr0bn3pl2zk9jd8k97p7n"; depends=[]; }; ADPclust = derive2 { name="ADPclust"; version="0.7"; sha256="0s47cpsjykn7imsssa9w9b6g9d1sz2yah78yqzxmh0i3lqd757c1"; depends=[cluster dplyr fields knitr]; }; + ADVICE = derive2 { name="ADVICE"; version="1.0"; sha256="1p8186715lzk4prxaw5v0np9z1zfj9zbp124jrch0yygvkxksy7r"; depends=[]; }; ADtools = derive2 { name="ADtools"; version="0.5.4"; sha256="0bl6wgdjhf55cxjkw2k7wd2kmkhlr1006lgs35ny1av8s7m2bwmk"; depends=[assertthat dplyr magrittr Matrix mvtnorm purrr Rcpp RcppArmadillo]; }; AEDForecasting = derive2 { name="AEDForecasting"; version="0.20.0"; sha256="16q2sn5zzvysyy3r32jnr21pbdkkn0k0sbarni6fdkx7pj27yijn"; depends=[changepoint forecast signal]; }; AEP = derive2 { name="AEP"; version="0.1.2"; sha256="07a3nlkiqbbwbd59n27sgiinlwsgfpy4mn13h41va97wlvd5zl2b"; depends=[]; }; @@ -50,8 +50,9 @@ in with self; { AGread = derive2 { name="AGread"; version="1.1.1"; sha256="0ar0cnlaxxmvn2gdydmm9vr45xjhx06kky556d17l93k0xwfvzm3"; depends=[anytime binaryLogic data_table DescTools dplyr GGIR lubridate magrittr PAutilities Rcpp reshape2 rlang seewave stringr]; }; AHM = derive2 { name="AHM"; version="1.0.1"; sha256="00r1rn7d64a18rckbxvla5yapqv00p9ajxv72fx7s6p80kfal89w"; depends=[devtools dplyr glmnet Matrix mixexp plgp quadprog tibble tidyr]; }; AHMbook = derive2 { name="AHMbook"; version="0.2.2"; sha256="0js9hlpi5yw6dwc7lsff7d71x045gx4scggik352p6y2y339hhpr"; depends=[coda mvtnorm plotrix RandomFields raster sp spdep unmarked]; }; + AHPhybrid = derive2 { name="AHPhybrid"; version="0.1.0"; sha256="1hf2ba52nim13jwkq857vnmnnb1yhgdz6kipqg3mmqrgz7kg52v1"; depends=[]; }; AICcmodavg = derive2 { name="AICcmodavg"; version="2.3-1"; sha256="1c2qqizssy7jvzkndlljazk28rjq5csgawzs43gv3s9qbahpslfh"; depends=[lattice MASS Matrix nlme survival unmarked VGAM xtable]; }; - AID = derive2 { name="AID"; version="2.5"; sha256="0il6qjv1gcbxdf1lknsfij4vxzc31qyp359abqzdvkzyxwgbbzsy"; depends=[ggplot2 MASS nortest psych tseries]; }; + AID = derive2 { name="AID"; version="2.6"; sha256="029zwgz8mwskh8gpliadxvvnsvkf045ghryci7sacgw0m5gg0xfc"; depends=[ggplot2 MASS meta nortest psych stringr tseries]; }; AIG = derive2 { name="AIG"; version="0.1.9"; sha256="1jnnfmcwxcv4fsdcz7jb2lgczxdwrq3qxg2bhsh1610iwz4gzii7"; depends=[dplyr magrittr mgcv rgl]; }; ALA4R = derive2 { name="ALA4R"; version="1.9.0"; sha256="0bxsdv2spdcbll09lmayln8ald8gbkngnqxwn0q5ccjdiaavmc4f"; depends=[assertthat data_table digest httr jsonlite sp stringr wellknown]; }; ALDqr = derive2 { name="ALDqr"; version="1.0"; sha256="0gk8hxh4p0fi47sf1zsvvxxbzp38vzk60wh8hmc63phnjab6qkv4"; depends=[HyperbolicDist sn]; }; @@ -69,7 +70,7 @@ in with self; { AMOEBA = derive2 { name="AMOEBA"; version="1.1"; sha256="1npzh3rpfnxd4r1pj1hm214sfgbw4wmq4ws093lnl7pvsl0q37xn"; depends=[rlecuyer snowfall spdep]; }; AMORE = derive2 { name="AMORE"; version="0.2-16"; sha256="0vw6hhykg1r6xxja6d4zb2y00x7pfkmhcq9xkidz8p4arinb7xnl"; depends=[]; }; AMPLE = derive2 { name="AMPLE"; version="0.0.2"; sha256="0j19f8rl7gkads4n52l5gfc5k7dx27sswzrypwl7dnxhfp4ivql7"; depends=[dplyr ggplot2 shiny shinyjs tidyr wesanderson]; }; - AMR = derive2 { name="AMR"; version="1.4.0"; sha256="1mni1yxg9pgbc45n1c7rpipj3794llw674ryzrihim0h8rpgh39i"; depends=[]; }; + AMR = derive2 { name="AMR"; version="1.6.0"; sha256="1xbgs372zn93i99njm7ka2dg2qxfwh231z2yslbal3h40p9il3pa"; depends=[]; }; ANN2 = derive2 { name="ANN2"; version="2.3.4"; sha256="1izljhz3rkzq05dkvg9q3fdyj7q871j8lsky67d5r8ffpzm1lk3z"; depends=[ggplot2 Rcpp RcppArmadillo reshape2 testthat viridisLite]; }; ANOM = derive2 { name="ANOM"; version="0.5"; sha256="14nfy9xplbabfprwxz5fvx26nmqhp657vr6d90dc8vk8ds63ckiz"; depends=[ggplot2 MCPAN multcomp nparcomp SimComp]; }; ANOVAIREVA = derive2 { name="ANOVAIREVA"; version="0.1.0"; sha256="04z2g79nnh5yhn4aqw0i7ck2b1z5dbasf1zp1sj6rjjrp9aqmaa6"; depends=[car dplyr ggplot2 plotly rmarkdown shiny]; }; @@ -77,10 +78,10 @@ in with self; { ANOVAShiny2 = derive2 { name="ANOVAShiny2"; version="0.1.0"; sha256="0bnxfg5c37wi5g53jd0zqq31yx29zvlk2m2jh6jlwki8khpp9y00"; depends=[DescTools dplyr HH rhandsontable rmarkdown shiny]; }; ANOVAreplication = derive2 { name="ANOVAreplication"; version="1.1.4"; sha256="0rq4aphjmqrr4pm55vpc8qr4rghqkmlsqsvxzarx3kmr3aqlmqg8"; depends=[quadprog shiny]; }; AOV1R = derive2 { name="AOV1R"; version="0.1.0"; sha256="0dv7k0mifybkarpwqyla5j6cvw9dcch09wvdq09ra9bsf4vyk652"; depends=[cellranger data_table lazyeval purrr]; }; + APCI = derive2 { name="APCI"; version="0.1.0"; sha256="01fxj9vpyhkms8d3hhzsijmdfv4c09v60mymrxsf8j56436f5i9r"; depends=[data_table dplyr ggplot2 ggpubr haven magrittr stringr survey tidyverse]; }; APCanalysis = derive2 { name="APCanalysis"; version="1.0"; sha256="11snn5i8zyjpzf58ica762fpp14v7x5h8a8iwx4s4v81pgvlx862"; depends=[]; }; APFr = derive2 { name="APFr"; version="1.0.2"; sha256="1vax7rfccds6qz3bi6n1h3nzl9jnxpwk331wmpsbqlk23md3m4g4"; depends=[]; }; APIS = derive2 { name="APIS"; version="1.0.1"; sha256="1af82mixamllly7v1jfvn1anpm1pafkv5mshwp6nmc27vaq201z5"; depends=[doParallel foreach ggplot2 gridExtra]; }; - APML = derive2 { name="APML"; version="0.0.1"; sha256="0qd3r6j5in0b9cz7k4pyb8qg0s5p7gvav41lm89mf4wm9gsdijpy"; depends=[DMwR dplyr dummies ggplot2 h2o pROC survival tidyverse]; }; APML0 = derive2 { name="APML0"; version="0.10"; sha256="1l6mw1mqb7qnsvfv9w6yydqjsrwrsrqx3bpifyp43cf2q71yx5gp"; depends=[Matrix Rcpp RcppEigen]; }; APPEstimation = derive2 { name="APPEstimation"; version="0.1.1"; sha256="1bg9ma4i3k3xdgyk2h4f368gqnczvlhvjw4114iznmrv1wl4g25c"; depends=[densratio]; }; APSIMBatch = derive2 { name="APSIMBatch"; version="0.1.0.2374"; sha256="0j44ijq1v1k60lka9nmw8m1jfjw7pidny9bvswqy5v82gzmwl29d"; depends=[]; }; @@ -91,16 +92,16 @@ in with self; { AR = derive2 { name="AR"; version="1.1"; sha256="1wn4g2997c4vc3mzq2pv8ld0ryp0i78v4zlqqryvhshxgnz4f2pr"; depends=[DISTRIB]; }; ARCensReg = derive2 { name="ARCensReg"; version="2.1"; sha256="05zjk1wxqfigzg80lvx1940a059jfdr9zbzgzmz2n01glj1lvj63"; depends=[msm mvtnorm numDeriv tmvtnorm]; }; ARCokrig = derive2 { name="ARCokrig"; version="0.1.1"; sha256="0l7z23k4bc2s295cvm3gs8kgkaawgq8g0j0r5jz1c2q2cdadh68q"; depends=[ggplot2 mvtnorm Rcpp RcppArmadillo RcppEigen]; }; - ARDL = derive2 { name="ARDL"; version="0.1.0"; sha256="08hjxq961jq46kr6fqpjzv9c1sq63amqm0lr40p4wjl7mpf93xzm"; depends=[aod dplyr dynlm lmtest msm stringr zoo]; }; + ARDL = derive2 { name="ARDL"; version="0.1.1"; sha256="0vmx21dvbz5l67drdma77z9x30j6sw650lhkrkcbifjn915x6dks"; depends=[aod dplyr dynlm lmtest msm stringr zoo]; }; ARHT = derive2 { name="ARHT"; version="0.1.0"; sha256="1fz81a202r8vk655dg6a03zfq3gfkimqjvmc95k3j02xz0iv58kn"; depends=[]; }; ARIbrain = derive2 { name="ARIbrain"; version="0.2"; sha256="18c7yxkrnqh18gcfzvdc5wqig6ywdmjcy8rlz0fdj3b8fb84dfpr"; depends=[hommel plyr RNifti]; }; - AROC = derive2 { name="AROC"; version="1.0-2"; sha256="1a7nxspq9kbzji417mr49i0s19ms8wyq48qz7rnlw1mrkipl4p6d"; depends=[Hmisc MASS Matrix moments nor1mix np spatstat]; }; - ARPobservation = derive2 { name="ARPobservation"; version="1.2.0"; sha256="1kgflalpymbsfzwg4c70mdxgrbsg8r8z44433v3y9rymhfyq9nmj"; depends=[]; }; + AROC = derive2 { name="AROC"; version="1.0-3"; sha256="07kzkb0mlx8nj8c0kz2b6in51biwawv7vvqqkg0h5zfj92k26hdb"; depends=[Hmisc MASS Matrix moments nor1mix np spatstat spatstat_geom]; }; + ARPobservation = derive2 { name="ARPobservation"; version="1.2.1"; sha256="1gpq5wl3mwp4hi49h1g6nnizzpnfc19pv8chdyhv8y5sraq1k2ag"; depends=[]; }; ART = derive2 { name="ART"; version="1.0"; sha256="186w1ivj5v3h906crl953qxgai5wiznaih83dgvwgnmabs9p1wvk"; depends=[car]; }; ARTP2 = derive2 { name="ARTP2"; version="0.9.45"; sha256="12nqxry2jkl1n07rbms38mrnp39cn00d0h272d9f1z5x883flv62"; depends=[data_table Formula]; }; - ARTool = derive2 { name="ARTool"; version="0.10.8"; sha256="1m7vc6ipbhl9rbrnk77af8l5f3z36500whynmp5v8k9ayv2h5b6k"; depends=[car dplyr lme4 magrittr plyr]; }; + ARTool = derive2 { name="ARTool"; version="0.11.0"; sha256="0mn935rsmppgxbbz4lkyzldpmyg7c2lxhlh8slipw8q8xdqz617l"; depends=[car dplyr emmeans lme4 magrittr plyr]; }; ARpLMEC = derive2 { name="ARpLMEC"; version="1.1"; sha256="1arn9cks6jbj0rk1r915bw92ac70jfk2b13zwgk78npxbwrnm80x"; depends=[gmm lmec MASS Matrix mnormt mvtnorm numDeriv sandwich tmvtnorm]; }; - ASGS_foyer = derive2 { name="ASGS.foyer"; version="0.2.1"; sha256="0f0bl1fxda012d8pgqpaqb80m0nn490xih3ddscfqgb87zgrp4sx"; depends=[sp]; }; + ASGS_foyer = derive2 { name="ASGS.foyer"; version="0.3.1"; sha256="089c4vm629rni0dfgg3r2a9s9yisdx1qs2dwssg44qw1w4hf1f50"; depends=[sp]; }; ASIP = derive2 { name="ASIP"; version="0.4.9"; sha256="06f1nvy920vyx3bmdi77mwvfsn32xsfxaslhagnf1zh652vfkbwi"; depends=[raster rgdal stringr]; }; ASMap = derive2 { name="ASMap"; version="1.0-4"; sha256="0xnrl8jhbvbc789w5gc9dz7j7gzc7wsc94a3d2wdplrmxn186nrb"; depends=[fields gtools lattice qtl RColorBrewer]; }; ASPBay = derive2 { name="ASPBay"; version="1.2"; sha256="0b1qpyvmj7z10ixrmdxp42bj9s72c1l9rihzmv9p58f12a5aznjz"; depends=[hexbin Rcpp RcppArmadillo]; }; @@ -108,28 +109,30 @@ in with self; { ASSISTant = derive2 { name="ASSISTant"; version="1.4.2"; sha256="1vh1glk83lg010v2fc289gr6xy0dzbrqcjfva2mmaymk6v78a1w5"; depends=[dplyr knitr magrittr mvtnorm R6]; }; ASSOCShiny = derive2 { name="ASSOCShiny"; version="0.1.0"; sha256="1g1ba9d5ywd3gbwjb36xnms8l15dg1vwc6r0nsb5adhpb602xsw1"; depends=[arules arulesViz dplyr plotly rmarkdown shiny shinyMatrix]; }; AST = derive2 { name="AST"; version="0.1.0"; sha256="0z5dw5qw0i61v4796ms7pp66f9y4ylxrcls31ixzcmkklh3rcnp3"; depends=[]; }; + ATAforecasting = derive2 { name="ATAforecasting"; version="0.0.52"; sha256="052cvlb6x2piwc4vvp6qz5bf9w6jips9z4rl5i6vvizp2x9ljk9j"; depends=[forecast Rcpp RcppArmadillo Rdpack seasonal stlplus stR timeSeries TSA tseries xts]; }; ATE = derive2 { name="ATE"; version="0.2.0"; sha256="1i46ivb7q61kq11z9v1rlnwad914nsdjcz9bagqx17vjk160mc0a"; depends=[]; }; ATR = derive2 { name="ATR"; version="0.1-1"; sha256="0via7zm3byzbdgrfw351fqvx0g5cj2z31bqfwh7kr99nqgjh0dyn"; depends=[partykit]; }; ATmet = derive2 { name="ATmet"; version="1.2.1"; sha256="17lzb4qnxgvlwy5zaz250mb0c4ayk509700k8mj8zf4dgv51kxa3"; depends=[DiceDesign lhs metRology msm sensitivity]; }; AUC = derive2 { name="AUC"; version="0.3.0"; sha256="0ripcib2qz0m7rgr1kiz68nx8f6p408l1ww7j78ljqik7p3g41g7"; depends=[]; }; AUCRF = derive2 { name="AUCRF"; version="1.1"; sha256="00d7jcg2dyvf7sc9w7vxxd85m7nsbcmfqsavrv236vxfpfc9yn7i"; depends=[randomForest]; }; AUtests = derive2 { name="AUtests"; version="0.99"; sha256="0ima350mjlqvij6f9xy6wfcibvlji7nh0prpqngj7apn82ri4m2k"; depends=[logistf]; }; - AWR = derive2 { name="AWR"; version="1.11.189"; sha256="0q9ss6cyx8vv85zif5v4s2bkv0amhyvzbs41mjjgmwb1csg53jgd"; depends=[rJava]; }; + AWAPer = derive2 { name="AWAPer"; version="0.1.46"; sha256="02n662wvd8qwshfmj9qfff730qs6ls82hkdsphw05jj6llddi4k5"; depends=[chron Evapotranspiration maptools ncdf4 raster sp xts zoo]; }; + AWR = derive2 { name="AWR"; version="1.11.189-1"; sha256="1imvpmq6br0z7l67w66a5s1ylbv6xvypj0wc09bmjy7sapdmkn4x"; depends=[rJava]; }; AWR_Athena = derive2 { name="AWR.Athena"; version="2.0.7-0"; sha256="1j9bqhyk0jzry4g379ml65gwxlszn7pjif1dywgns98jbry8mavh"; depends=[rJava RJDBC]; }; AWR_KMS = derive2 { name="AWR.KMS"; version="0.1"; sha256="00aqhyqlncsv0vfcyhaazxaclwm63v5kscssash7529avdwd4gqg"; depends=[AWR jsonlite rJava]; }; AWR_Kinesis = derive2 { name="AWR.Kinesis"; version="1.7.3"; sha256="1gfjzbb8xxfd2x5zabysqi0x10sb1c9826wqw8y555nsxgksqxz8"; depends=[AWR futile_logger jsonlite rJava]; }; - AbSim = derive2 { name="AbSim"; version="0.2.6"; sha256="16ddjk8b6xw80ch4jis1y751i9561wdxh0gifbf15qiz3vjckq8m"; depends=[ape poweRlaw]; }; Ac3net = derive2 { name="Ac3net"; version="1.2.2"; sha256="1ns4n0xxz6p34c11bj0k7nzgmyqr9mis2b0g5nfz37dbikndyqyz"; depends=[data_table]; }; AcceptanceSampling = derive2 { name="AcceptanceSampling"; version="1.0-6"; sha256="1z3rmln63ki2kik9kinbwr9qhr32ggbmh4mm3xqy6di119n47ca9"; depends=[]; }; AcousticNDLCodeR = derive2 { name="AcousticNDLCodeR"; version="1.0.2"; sha256="1fgzgwanpv2pzy74xdk3hamc44p8qch467wh163dxby8jr9ik0sb"; depends=[seewave tuneR zoo]; }; AcrossTic = derive2 { name="AcrossTic"; version="1.0-3"; sha256="03180h79jhjd66ibrnsfp3yyp2jlfysp7cymw46phzj2palghsc0"; depends=[lpSolve treeClust]; }; - ActCR = derive2 { name="ActCR"; version="0.1.0"; sha256="1rrbn0l0yy8nlp9ghjya1gh0c7brbypazdy934209h3kqm17cgzv"; depends=[cosinor cosinor2 dplyr zoo]; }; + ActCR = derive2 { name="ActCR"; version="0.2.0"; sha256="1jjkmw0pwr8xlmhiw3wpyjfmi2xcx569zvp797ywvjk6rvipzw52"; depends=[cosinor cosinor2 dplyr minpack_lm zoo]; }; ActFrag = derive2 { name="ActFrag"; version="0.1.1"; sha256="08r3gwjz4fkyy85dxqix0ffm5xyq45032qv3snnzxnlqxslxbqn1"; depends=[accelerometry dplyr ineq survival tidyr]; }; ActiveDriver = derive2 { name="ActiveDriver"; version="1.0.0"; sha256="10c7ga48fwvpd5mc4dqiyw4kc2l0iz5qn4hg7xk15r1qmm5rsipa"; depends=[MASS]; }; ActiveDriverWGS = derive2 { name="ActiveDriverWGS"; version="1.1.1"; sha256="06mvakdc8d2pn91p0sr4ixc561s4ia5h1cvd1p7pqd6s50dy4say"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; ActivePathways = derive2 { name="ActivePathways"; version="1.0.2"; sha256="1hxy760x141ykrpqdbfldq4ggj1svj3lsrpwi4rb2x7r4lna937l"; depends=[data_table ggplot2]; }; + ActivityIndex = derive2 { name="ActivityIndex"; version="0.3.7"; sha256="1zj2b6x31a1kxl80rarmkrlm7ack4154mrkbqs3fpi48zpmjbgd5"; depends=[data_table matrixStats R_utils]; }; AcuityView = derive2 { name="AcuityView"; version="0.1"; sha256="0f0iclmnwdc8ixiiai4svk4x1g3pjy7dhm3cm58fv6ckx12d3d2l"; depends=[fftwtools imager plotrix]; }; - AdMit = derive2 { name="AdMit"; version="2.1.5"; sha256="1gsskg3ayzyz0wa4abi20zzmkbnal6igwd6m7rafvpgzlffms1r9"; depends=[mvtnorm]; }; + AdMit = derive2 { name="AdMit"; version="2.1.6"; sha256="0liql0xzm147xyksji5gj4b0vjl36a1g2pingsylr6rs8gw5m19y"; depends=[mvtnorm]; }; AdaSampling = derive2 { name="AdaSampling"; version="1.3"; sha256="1c8dh8lxyb076317n4qk2g3qv5j4mc1dszbh3k1p2b0nxiprqk5i"; depends=[caret class e1071 MASS]; }; AdapEnetClass = derive2 { name="AdapEnetClass"; version="1.2"; sha256="01k3mj4g1ckbng7wkzzn9h0k9yf01cpnnkly0sjda574c5jhj0rc"; depends=[glmnet imputeYn lars quadprog]; }; AdapSamp = derive2 { name="AdapSamp"; version="1.1.1"; sha256="1jayjrsiib2ij4rxxj59g71r3xhzl5yqh0lhi8k6cfy03i7dkvis"; depends=[pracma]; }; @@ -143,16 +146,18 @@ in with self; { AdjBQR = derive2 { name="AdjBQR"; version="1.0"; sha256="14437pyz9v09ighwqvy1lcw0vfp2gaqzs9nzrb1gkfbb8ndzjw7k"; depends=[coda MHadaptive quantreg survival]; }; AdvBinomApps = derive2 { name="AdvBinomApps"; version="1.0"; sha256="1cnmn6c2dyl8qfl7g5sqwbjb52psqxzrj1mbm06zak2y1j7j8f49"; depends=[GenBinomApps rootSolve]; }; AdvDif4 = derive2 { name="AdvDif4"; version="0.7.18"; sha256="1xdbk7w55cb2fh0mqlyrkdpnglrs55kyvvp32anvf2nw3ssrfmy7"; depends=[]; }; + AdvancedBasketballStats = derive2 { name="AdvancedBasketballStats"; version="1.0.1"; sha256="0wwqnijhz2sa3pcf8mjidw7m4awqgbsn4sgly93zyspb5fv7yblk"; depends=[]; }; AeRobiology = derive2 { name="AeRobiology"; version="2.0.1"; sha256="14d5gjx53v2wfij8m4br0k7lfi6x2frc8ny1li4g8c05qv2dvnbb"; depends=[circular data_table dplyr ggplot2 ggvis lubridate plotly scales tidyr writexl zoo]; }; AggregateR = derive2 { name="AggregateR"; version="0.1.1"; sha256="1s2q888bqx6ilisv5s4g8ryja97nz6cz4ycm4sw1i63l5wjrwljc"; depends=[data_table NCmisc tibble]; }; AgreementInterval = derive2 { name="AgreementInterval"; version="0.1.1"; sha256="1bvinzylvsaipa8mq15f45b6h37znavlrdl0rbrx1pqw52r7z8kv"; depends=[psych]; }; AhoCorasickTrie = derive2 { name="AhoCorasickTrie"; version="0.1.2"; sha256="0zh3y5jd8m0xbj6lqr01zvwj9qd1xr3iq7vd6sgr3g3qh4kqm5pq"; depends=[Rcpp]; }; - AirSensor = derive2 { name="AirSensor"; version="1.0.2"; sha256="01fnsn8g9d99mvrp9kyjvfd2m4d7gh21n8v2yi93i1g4fwp3dmj7"; depends=[countrycode cowplot dplyr dygraphs geodist geosphere GGally ggmap ggplot2 gridExtra httpcode httr jsonlite leaflet lubridate magrittr MazamaCoreUtils MazamaLocationUtils MazamaSpatialUtils openair PWFSLSmoke RColorBrewer readr rlang scales seismicRoll sp stringr tibble tidyr tidyselect worldmet xts zoo]; }; + AirSensor = derive2 { name="AirSensor"; version="1.0.8"; sha256="0wpfg3mry1vdyd9v1981hasizj1mn5wy60ig9swxlqdm7j11wxan"; depends=[countrycode cowplot dplyr dygraphs geodist geosphere GGally ggmap ggplot2 gridExtra httpcode httr jsonlite leaflet lubridate magrittr MazamaCoreUtils MazamaLocationUtils MazamaSpatialUtils openair PWFSLSmoke RColorBrewer readr rlang scales seismicRoll sp stringr tibble tidyr tidyselect worldmet xts zoo]; }; Ake = derive2 { name="Ake"; version="1.0"; sha256="1dj598xfdyjqvysc39a0d5gizgk367c5lkddmwmsqa8zjmvpr15a"; depends=[]; }; AlgDesign = derive2 { name="AlgDesign"; version="1.2.0"; sha256="0ammlg148gk0p24fh700116nd66636np0jb1wwh0axq5jphwk1pz"; depends=[]; }; AlgebraicHaploPackage = derive2 { name="AlgebraicHaploPackage"; version="1.2"; sha256="1krm5cx609sv2p0g3xm5jaiqs9li06v717lw7ywjvx7myc9x4c07"; depends=[]; }; AllPossibleSpellings = derive2 { name="AllPossibleSpellings"; version="1.1"; sha256="0ksfm2pfjka3yjgcd257v7sns1niaylsfxvhhh2jwdi016cpdw10"; depends=[]; }; AlleleRetain = derive2 { name="AlleleRetain"; version="2.0.2"; sha256="0b6h5giskqbjbrk8nf29i75wrhxsjw1c87laiqzrpbp9n717bl20"; depends=[]; }; + AlleleShift = derive2 { name="AlleleShift"; version="1.0-1"; sha256="09qq5jm3jhhq4373k13shyvdjkcfzh5h93jylpfnd0j16ipp66vf"; depends=[adegenet BiodiversityR vegan]; }; AlphaPart = derive2 { name="AlphaPart"; version="0.8.1"; sha256="0gmiwx6f1bzyakz6yz9bk25xlys7rlapglrqv5qkmn4l4ddqyhwq"; depends=[directlabels gdata ggplot2 pedigree Rcpp reshape]; }; AlphaSimR = derive2 { name="AlphaSimR"; version="0.13.0"; sha256="0rhdj7gy8k6nfdczg1y5xa0lhjmsxr9g7cpd0z68mxdzycrchhvl"; depends=[BH R6 Rcpp RcppArmadillo]; }; AlphaVantageClient = derive2 { name="AlphaVantageClient"; version="0.0.1"; sha256="095m850v945lw7i3qd812p28srdb5hdk9h52zf6bkr166zai1ni0"; depends=[httr xts]; }; @@ -168,9 +173,10 @@ in with self; { AnaCoDa = derive2 { name="AnaCoDa"; version="0.1.4.4"; sha256="1b03bxysvw9v4j3bzsmrjf5ci06v6s83ix89qxy73ba5akf2gb7h"; depends=[mvtnorm Rcpp VGAM]; }; AnalyzeFMRI = derive2 { name="AnalyzeFMRI"; version="1.1-23"; sha256="0i4llbd0h266y26j1skkgmlsbvg4imka5zyd951n2bl1zr7wlds2"; depends=[fastICA R_matlab]; }; AncestryMapper = derive2 { name="AncestryMapper"; version="2.0"; sha256="1fr2y1a5rn7rq8aly94f618kywix32jwysi70nfhaqx8hf4zzprb"; depends=[svd]; }; - AnchorRegression = derive2 { name="AnchorRegression"; version="0.1.1"; sha256="1inv40r39f3lakvaxsrr7ffqfym6yzsnc088w1mv7y087218bz1w"; depends=[glmnet selectiveInference]; }; - Andromeda = derive2 { name="Andromeda"; version="0.4.0"; sha256="05zp89ns9adh9ffyk8lswiydzdm2pinzslrxzg82j4c16q9k94h5"; depends=[cli DBI dbplyr dplyr pillar rlang RSQLite tidyselect zip]; }; + AnchorRegression = derive2 { name="AnchorRegression"; version="0.1.3"; sha256="1bmlxk5j3i9mm71cwz785q5sysp8hsyy0080kgd3ksx78p68ara5"; depends=[glmnet mgcv selectiveInference]; }; + Andromeda = derive2 { name="Andromeda"; version="0.4.1"; sha256="1135sqz54g6pw0z4c7r0kdz296arjxvny3d5xg9ns6xwqwjnfy70"; depends=[cli DBI dbplyr dplyr pillar rlang RSQLite tidyselect zip]; }; AnglerCreelSurveySimulation = derive2 { name="AnglerCreelSurveySimulation"; version="1.0.2"; sha256="1nhd0i30g5wb5jh96gfaa0lgnbnj0m2vy4gz7v2c3142396zalnx"; depends=[dplyr ggplot2]; }; + AnimalAPD = derive2 { name="AnimalAPD"; version="1.0.0"; sha256="1csa6disrg11hpxg4zw0jay15srw9lsgbhl1xgl7hpdr3nqsv3s7"; depends=[activityGCMM brms circular ggplot2 gridExtra loo overlap]; }; AnimalHabitatNetwork = derive2 { name="AnimalHabitatNetwork"; version="0.1.0"; sha256="1bhqypkiw5v9w26jbdmhndqj5hjfmf7zwivrq2hgs0zcjxwa8gfn"; depends=[ggplot2 igraph]; }; AnnotLists = derive2 { name="AnnotLists"; version="1.2"; sha256="1g2khb2ggniwg2zcjamsm3bxyrl2zabvk540b5vyy9am9k83m1g9"; depends=[]; }; AnnotationBustR = derive2 { name="AnnotationBustR"; version="1.3.0"; sha256="1q5yxzzmzvw1r64r4y0xh1fiyhaqbx5q4lzpawqaggra4w9igdl8"; depends=[ape seqinr]; }; @@ -178,7 +184,7 @@ in with self; { AntAngioCOOL = derive2 { name="AntAngioCOOL"; version="1.2"; sha256="1krwms0y3xppc2y4m0az51wcbh4jq7mlr0jwinp66w8gh4k3qnp2"; depends=[caret rJava rpart RWeka]; }; AntWeb = derive2 { name="AntWeb"; version="0.7"; sha256="1ykfg3zzjdvjppr2l4f26lx00cn5vaqhhz1j1b5yh113ggyl40qw"; depends=[assertthat httr leafletR plyr rjson]; }; AnthropMMD = derive2 { name="AnthropMMD"; version="3.1.0"; sha256="10ms5akc2r9dmcm8dd8bn7qn0bq71c270yhs61981n4mxsvgjmnr"; depends=[plotrix scatterplot3d shiny smacof]; }; - Anthropometry = derive2 { name="Anthropometry"; version="1.14"; sha256="0y52g15pcgs4b68sfczn6nnpdqsialsb4mq3wb9a2gba7qdcf76y"; depends=[archetypes biclust cluster depth FNN ICGE nnls rgl shapes]; }; + Anthropometry = derive2 { name="Anthropometry"; version="1.15"; sha256="03xw0ggb2qqlldrv0qpjwmncnari742habb46im7y65bhgnr2awx"; depends=[archetypes biclust cluster depth FNN ICGE nnls rgl shapes]; }; Aoptbdtvc = derive2 { name="Aoptbdtvc"; version="0.0.2"; sha256="1bygvf8vgzz3wa4485x2xxpk784zmw1nwsjjjysm12brrldh8zzh"; depends=[lpSolve MASS]; }; ApacheLogProcessor = derive2 { name="ApacheLogProcessor"; version="0.2.3"; sha256="0h4snigh1yhp34vw52h4b6qbh9c4cvwz2cx8fwvbnw6lslmg5cgv"; depends=[doParallel foreach stringr]; }; AppliedPredictiveModeling = derive2 { name="AppliedPredictiveModeling"; version="1.1-7"; sha256="1wi0sw5w1c51rmh9z98wdpk5rgzsylkkb6g019djiwxvj92l99hh"; depends=[CORElearn ellipse lattice MASS plyr reshape2]; }; @@ -189,18 +195,19 @@ in with self; { ArchaeoChron = derive2 { name="ArchaeoChron"; version="0.1"; sha256="1qma2432mm73h72g9ah1k02wlcb6yrhc6mpai9nj7v58s126ffxn"; depends=[ArchaeoPhases Bchron coda rjags]; }; ArchaeoPhases = derive2 { name="ArchaeoPhases"; version="1.5"; sha256="1jp5ip595vvni1iqqm5wiqmqw9g2d1vvvwl06cr8qj8yh4n6xsfw"; depends=[coda digest dplyr DT ggalt ggplot2 ggthemes gplots hdrcde magrittr readr reshape2 shiny shinythemes tibble toOrdinal]; }; ArchaeoPhases_dataset = derive2 { name="ArchaeoPhases.dataset"; version="0.1.0"; sha256="1bwfw3azhz4cbcinimj1nnmz04zw4lmn3bh419w73jmcswqrym0n"; depends=[]; }; - ArgumentCheck = derive2 { name="ArgumentCheck"; version="0.10.2"; sha256="0mgx7mzbg2wynixcf9hvs0i9p4zka7c3chrfvjmvvvwwgsy24hkc"; depends=[]; }; Arothron = derive2 { name="Arothron"; version="2.0.1"; sha256="10gfw64y34dvds72s1fj2dphm18nc3xrnvadxarq89aaxsknil3h"; depends=[abind alphashape3d compositions doParallel foreach geometry Morpho rgl Rvcg stringr vegan]; }; - ArrayBin = derive2 { name="ArrayBin"; version="0.2"; sha256="0jlhcv2d7pmqi32w71nz063ri1yj4i4isr3msnw7ckzvi9r42jwm"; depends=[SAGx]; }; AsioHeaders = derive2 { name="AsioHeaders"; version="1.16.1-1"; sha256="0hp08v6if476745v2mk9k2sp1ikiac94fcnp8v9jdcyx954fqqlq"; depends=[]; }; AssetCorr = derive2 { name="AssetCorr"; version="1.0.3"; sha256="0xcyj9xw895p4j03j9c76k7ylhkmf777akg4m90av12ad05njjbv"; depends=[boot ggplot2 mvQuad mvtnorm numDeriv Rdpack VineCopula]; }; AssetPricing = derive2 { name="AssetPricing"; version="1.0-1"; sha256="0pbb1362dgdipbj3h50ykissl3gdqf1j1mpq53ixprvyc966c5h4"; depends=[deSolve polynom]; }; AssocAFC = derive2 { name="AssocAFC"; version="1.0.2"; sha256="1rjiiir472dnr15xyvpn81s62nf01gl70khr8mrni65ssp5m30fb"; depends=[CompQuadForm]; }; - AssocTests = derive2 { name="AssocTests"; version="1.0-0"; sha256="0wlpyl13dxqn50aajz71zhiggqsay2xk2cqxh91pvgf60c291nlp"; depends=[cluster combinat fExtremes mvtnorm]; }; + AssocTests = derive2 { name="AssocTests"; version="1.0-1"; sha256="1wp5swnpd6m5g4zm14lllclmw058513n1g3kq1iqc0acjavkqy17"; depends=[cluster combinat fExtremes mvtnorm]; }; AssotesteR = derive2 { name="AssotesteR"; version="0.1-10"; sha256="0aysilg79vprcyjirqz6c5s1ry1ia92xik3l38qrw1gf3vfli9cw"; depends=[mvtnorm]; }; + AsthmaNHANES = derive2 { name="AsthmaNHANES"; version="1.1.0"; sha256="106c6fh20s98fzixs4jpa4d413himrfg31rzwsxp72yldqxg70fx"; depends=[]; }; AsyK = derive2 { name="AsyK"; version="1.5.4"; sha256="0l2d6h1i5bvxizvcjq15z0dhq274qz07fq6hh4j6d6ifm0z34829"; depends=[decon ICV kedd kerdiest KernSmooth ks locfit OSCV sm]; }; AsynchLong = derive2 { name="AsynchLong"; version="2.1"; sha256="111kg1cacqlz4df1lnijybnrifjscjm78ji9p0ia615gacvdcfxa"; depends=[]; }; + AtmChile = derive2 { name="AtmChile"; version="0.1.0"; sha256="03kygn5pxj5rclcq6r1nqf74jr6k65hcl52jvrlmf2w0d888925z"; depends=[data_table]; }; AtmRay = derive2 { name="AtmRay"; version="1.31"; sha256="162078jd032i72sgaar9hqcnn1lh60ajcqpsz4l5ysxfkghcxlh8"; depends=[]; }; + AugmenterR = derive2 { name="AugmenterR"; version="0.1.0"; sha256="0hi501p8ksaqzc9dq16dbmkz50kakgw3k0awdkbpci5can2sqvfl"; depends=[]; }; AurieLSHGaussian = derive2 { name="AurieLSHGaussian"; version="0.2.0"; sha256="0dzwqv396inbx4r6758vr4gip1y42ahavspadgm4xhafvipg73rb"; depends=[flexclust igraph lsa reshape2 stringdist]; }; AutoDeskR = derive2 { name="AutoDeskR"; version="0.1.3"; sha256="1n7c8ris8b517bs1wahpvrhwfbvn2q4jbq01kgiv9lfmkjckzfkc"; depends=[httr jsonlite shiny]; }; AutoPipe = derive2 { name="AutoPipe"; version="0.1.6"; sha256="0bzllh92fgsmz79lh6m2f10vsx5qng4l7bwbwkp2kzwnncy7cq63"; depends=[annotate cluster clusterProfiler ConsensusClusterPlus fgsea msigdbr org_Hs_eg_db pamr RColorBrewer Rtsne siggenes]; }; @@ -209,20 +216,20 @@ in with self; { Autoplotprotein = derive2 { name="Autoplotprotein"; version="1.1"; sha256="13mxqmhhdiq7mz4m6nx39dsq7x3bm8fsgskswx48vsq6x2k6byxa"; depends=[ade4 plotrix plyr seqinr XML]; }; AutoregressionMDE = derive2 { name="AutoregressionMDE"; version="1.0"; sha256="1dmg0q4sp2d2anzhw2my8xjhpyjsx0kf7r202q5bkw8yr57jnhvr"; depends=[]; }; Autoseed = derive2 { name="Autoseed"; version="0.1.0"; sha256="0xr3sjfccvp8h18jqxzajb2pfn4nm8q9maic6k9zzr15fxvphiy5"; depends=[]; }; - AzureAuth = derive2 { name="AzureAuth"; version="1.2.5"; sha256="10lwfnsl08s6l0c1ll1pdysznkaj2xxizi3bny99zlvl4phqxgy5"; depends=[httr jose jsonlite openssl R6 rappdirs]; }; + AzureAuth = derive2 { name="AzureAuth"; version="1.3.1"; sha256="1ybx5p15i04n86yqc3wsyq93g48rccsw2xz730qr2if5lnw7k97r"; depends=[httr jose jsonlite openssl R6 rappdirs]; }; AzureCognitive = derive2 { name="AzureCognitive"; version="1.0.1"; sha256="1mn3qw5g77x24qyhybhn1p3h4s9ymdafrj35i24f32ncr5abnd2f"; depends=[AzureAuth AzureRMR httr jsonlite]; }; AzureContainers = derive2 { name="AzureContainers"; version="1.3.1"; sha256="1ms576p6g0lkm3b7jzj9b6b0phdrz4z8ws1nsrvdhn13s33zwrzi"; depends=[AzureGraph AzureRMR httr openssl processx R6]; }; - AzureGraph = derive2 { name="AzureGraph"; version="1.1.2"; sha256="0ghhv6ifpgwc3gbwvsp5dz6qfci3xwd99r3wfzjh1cdan09i7l6m"; depends=[AzureAuth httr jsonlite openssl R6]; }; + AzureCosmosR = derive2 { name="AzureCosmosR"; version="1.0.0"; sha256="07bpmjxfyzk1aq8r06biiqsn2ibv7ymgqccxfxkbvszpfq79nryj"; depends=[AzureRMR curl httr jsonlite openssl uuid vctrs]; }; + AzureGraph = derive2 { name="AzureGraph"; version="1.3.0"; sha256="0cc2gxkjxzwsnvglkx2pcvi43wq7dlpbam00cf8w8k1x4fxsdwvb"; depends=[AzureAuth curl httr jsonlite openssl R6]; }; AzureKeyVault = derive2 { name="AzureKeyVault"; version="1.0.4"; sha256="0b56z3b2f6l58gy2z3zy3sx3kpagvywr8dasl65qvg4ha6wbz3xg"; depends=[AzureAuth AzureGraph AzureRMR httr jose jsonlite openssl R6]; }; AzureKusto = derive2 { name="AzureKusto"; version="1.0.6"; sha256="02wj1nzbs9l6aapk94p89gahbffmk3gy80l57bd1l0afpw0y3jr8"; depends=[AzureAuth AzureRMR DBI dplyr httr jsonlite openssl R6 rlang tibble tidyselect]; }; AzureQstor = derive2 { name="AzureQstor"; version="1.0.1"; sha256="1z7j8kakiarpw3q2rii7gl9zc2nsb49nzs1nxg1hgfyvcdhw2fcg"; depends=[AzureRMR AzureStor httr openssl]; }; - AzureRMR = derive2 { name="AzureRMR"; version="2.3.6"; sha256="0ck7g1idrpkqsv1qdhlb98i45jslgj242l7mk5k06dcmqa17q2wx"; depends=[AzureAuth AzureGraph httr jsonlite R6 uuid]; }; - AzureStor = derive2 { name="AzureStor"; version="3.3.0"; sha256="1qb1cl1wndx330gyd9w62gbr9kkrfivwn7ywb97lwkp8b7yhqpsm"; depends=[AzureRMR httr mime openssl R6 xml2]; }; + AzureRMR = derive2 { name="AzureRMR"; version="2.4.1"; sha256="1nyz54qfnwhx3qvva4gscfp4b8krk2mvxqzks2qqfrlmjlfilhp6"; depends=[AzureAuth AzureGraph httr jsonlite R6 uuid]; }; + AzureStor = derive2 { name="AzureStor"; version="3.4.1"; sha256="051m41kh1m0mmsxnap2cs917c860q91b55ilb8x66bbpf0xmb9vp"; depends=[AzureRMR httr mime openssl R6 xml2]; }; AzureTableStor = derive2 { name="AzureTableStor"; version="1.0.0"; sha256="0xrfpi9psn1h21g4mvcbqsjav56s8cha381vsjkp1swilrxhmk5l"; depends=[AzureRMR AzureStor httr jsonlite openssl uuid vctrs]; }; AzureVM = derive2 { name="AzureVM"; version="2.2.2"; sha256="0766a4y17qgq3vgb398n6zn8sdjrv65gpvrnr9b9g89zdsdy9fc4"; depends=[AzureRMR jsonlite R6]; }; AzureVMmetadata = derive2 { name="AzureVMmetadata"; version="1.0.1"; sha256="15ghijzva6qzq2riq8ci4bh6ssknnp15yyy1fql0k4878wkf7vs0"; depends=[httr openssl]; }; AzureVision = derive2 { name="AzureVision"; version="1.0.2"; sha256="0a4lnj60577bxy5vyd7yqji984kgwpwd4zykxz2d060r8l31rf42"; depends=[AzureCognitive AzureRMR httr]; }; - BACA = derive2 { name="BACA"; version="1.3"; sha256="1vbip7wbzix1s2izbm4058wmwar7w5rv3q8bmj9pm7hcapfi19k0"; depends=[ggplot2 RDAVIDWebService rJava]; }; BACCO = derive2 { name="BACCO"; version="2.0-9"; sha256="0i1dnk0g3miyv3b60rzgjjm60180wxzv6v2q477r71q74b0v0r1y"; depends=[approximator calibrator emulator]; }; BACCT = derive2 { name="BACCT"; version="1.0"; sha256="0bpm4l27vbblzi2hhfbjw2af3ic2jbnyghkvchpq8ww43k8068iv"; depends=[ggplot2 reshape2 rjags]; }; BACprior = derive2 { name="BACprior"; version="2.0"; sha256="1z9dvjq4lr99yp6c99bcv6n5jiiwfddfz4izcpfnnyvagfgizr8p"; depends=[boot leaps mvtnorm]; }; @@ -233,24 +240,24 @@ in with self; { BALLI = derive2 { name="BALLI"; version="0.2.0"; sha256="0qmjwpj56n07dvjwfknqvc02f0y5mlwh2yz4lrw7c4wqgrckcpgi"; depends=[edgeR limma MASS]; }; BAMBI = derive2 { name="BAMBI"; version="2.3.0"; sha256="0b9zbnb56rzwb8bfv3yq84vzbjr1agcil46xwsjh9zg3vl8jp99h"; depends=[bridgesampling coda future_apply gtools label_switching lattice loo mvtnorm numDeriv qrng RColorBrewer Rcpp RcppArmadillo scales]; }; BAMMtools = derive2 { name="BAMMtools"; version="2.1.7"; sha256="1xpks3in0mj1b82z3ax2k3q06bgr3sj0nhr2dbs2crbvszb8hcp2"; depends=[ape gplots Rcpp]; }; - BANOVA = derive2 { name="BANOVA"; version="1.1.8"; sha256="1xa0mp6m78w07a70ii8cbmlsx0qhqm09pczmwb085f4l6bqc8d16"; depends=[coda rjags rstan runjags]; }; - BAREB = derive2 { name="BAREB"; version="0.1.0"; sha256="1h3bgfxbs489cywgblrpl8jjhgs1krimdvv6fryjnc9rhw1mymdr"; depends=[Rcpp RcppArmadillo]; }; + BANOVA = derive2 { name="BANOVA"; version="1.2.0"; sha256="0zyfgcx6wxrl9vgdpbzcs8pb6irmyagknjkcl1x30pzlj4dlx3kg"; depends=[coda rjags rstan runjags]; }; BARIS = derive2 { name="BARIS"; version="1.1.1"; sha256="1h1zrgpn69nvz61567c08vfynmzy70g31a37wp4p6g8wri1hr7xg"; depends=[checkmate data_table downloader dplyr httr janitor jsonlite magrittr memoise miniUI rgdal rio rstudioapi sf shiny stringi stringr XML]; }; - BART = derive2 { name="BART"; version="2.8"; sha256="05vh4bzbimf81dcpdzvrylfl78p6mviapzwha1420hprfq9zgvzc"; depends=[nlme nnet Rcpp survival]; }; + BART = derive2 { name="BART"; version="2.9"; sha256="1yzwiyjc2gq2vvw5z2psmyqbbb1kq0xvsb0zingcn8qikw45mm5m"; depends=[nlme nnet Rcpp survival]; }; BAS = derive2 { name="BAS"; version="1.5.5"; sha256="1iakx36r4lnl6xs77m9mfcj5w3mb4g482s2mpzq65v69k10nj8lj"; depends=[]; }; BASIX = derive2 { name="BASIX"; version="1.1"; sha256="18dkvv1iwskfnlpl6xridcgqpalbbpm2616mvc3hfrc0b26v01id"; depends=[]; }; BASS = derive2 { name="BASS"; version="1.2.2"; sha256="14zimfdkpsil22n1z4ldpi9smmja5kf7qqlklr5sr7y5avnh0hd9"; depends=[hypergeo truncdist]; }; BASiNET = derive2 { name="BASiNET"; version="0.0.4"; sha256="0pmn4znqhpav729ai7zr027a7sx6bz2lmlk086crmwm1fnwipqq4"; depends=[Biostrings igraph randomForest rJava rmcfs RWeka]; }; - BAT = derive2 { name="BAT"; version="2.4.1"; sha256="1swi3r99200bg4hmpf075y2zfmdf8r5wcnmyz1fwr1l82w4mfgds"; depends=[geometry hypervolume nls2 raster spatstat vegan]; }; + BAT = derive2 { name="BAT"; version="2.5.1"; sha256="1rx7kb9d8n653lkml9acfcykfp0azsrm9n1hyx5mlxl511rv9ixr"; depends=[geometry hypervolume nls2 raster vegan]; }; BAYSTAR = derive2 { name="BAYSTAR"; version="0.2-9"; sha256="0crillww1f1jvhjw639sf09lpc3wpzd69milah143gk9zlrkhmz2"; depends=[coda mvtnorm]; }; - BAwiR = derive2 { name="BAwiR"; version="1.2.4"; sha256="19iphlhas0d5hyjv00761zbdxx1ijycrnswww5sczr30r5dkacp8"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plyr purrr reshape2 rvest rworldmap scales stringi stringr tibble tidyr xml2]; }; + BAwiR = derive2 { name="BAwiR"; version="1.2.6"; sha256="06ib2xby22cii230vcirnwh9wvda029mjz5y2jlwrxr555hxdqkc"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plyr purrr reshape2 rvest rworldmap scales stringi stringr tibble tidyr xml2]; }; BB = derive2 { name="BB"; version="2019.10-1"; sha256="0kf9sfsm3n036a8a8gjfpc9qdryvadb019kqjh80n1szdv7bdl04"; depends=[quadprog]; }; BBEST = derive2 { name="BBEST"; version="0.1-8"; sha256="0j3ykxsmxima75h40mhqm32l2ffc27pk11rfzjyvv1cm6q2q3gbh"; depends=[aws DEoptim ggplot2 reshape2 shiny]; }; BBI = derive2 { name="BBI"; version="0.3.0"; sha256="167sndfp3776p8n9zdpihc9xhqqi8wygzpl49dzkfj53gwa77rnn"; depends=[vegan]; }; BBMM = derive2 { name="BBMM"; version="3.0"; sha256="1cvv786wf1rr5906qg1di2krrv5jgw3dnyl8z2pvs8jyn0kb3fkj"; depends=[]; }; BBMV = derive2 { name="BBMV"; version="2.1"; sha256="11d4wd1zx99hrhwagw73jkk088rz5vgkjml6mckssc2iqvhj1dc9"; depends=[ape]; }; BBRecapture = derive2 { name="BBRecapture"; version="0.2"; sha256="1w0m8p4mwjsycv9krmsgdyjckic2nwxbyhrz1s2gng2v1h20zvlf"; depends=[HI lme4 locfit secr]; }; - BBcor = derive2 { name="BBcor"; version="1.0.0"; sha256="1acaqpn1q0kvk423hkbnwjq00nd0jg24w8v1ygfhys7mq0hphk04"; depends=[pbapply psych wdm]; }; + BBSSL = derive2 { name="BBSSL"; version="0.1.0"; sha256="0vb3afbx8p3frliy92sf2wlmx32rasxj39i8d023m2dvsblbh50x"; depends=[glmnet greybox Matrix mvnfast rmutil statmod svMisc truncnorm]; }; + BBcor = derive2 { name="BBcor"; version="1.0.1"; sha256="1rcd8scaz2mdsf7wg787wzgvbvfvdyc40j17jn4y5j6yd54dbl8m"; depends=[bayeslincom pbapply psych wdm]; }; BBmisc = derive2 { name="BBmisc"; version="1.11"; sha256="1lh1n4bvxzivb5rbz69mvd8xdgr3gr2bnqd68a39sd1530l8r90y"; depends=[checkmate]; }; BCA = derive2 { name="BCA"; version="0.9-3"; sha256="0ksd6b0ykydgdn33x29bwwqkrp23cvdj3imps0l6qs1p4465j5nf"; depends=[car clv flexclust Rcmdr RcmdrMisc rpart]; }; BCA1SG = derive2 { name="BCA1SG"; version="0.1.0"; sha256="14jvi5gn19f72szcnyhfpdld00cc7gyih5qrm4bpzvp553f1svvk"; depends=[logOfGamma Matrix]; }; @@ -267,47 +274,49 @@ in with self; { BCellMA = derive2 { name="BCellMA"; version="0.3.4"; sha256="1njprs7ksv0w18ffs0agz0290aa2akw48225iaa3bjhbl08dpidl"; depends=[ggplot2 reshape2]; }; BCgee = derive2 { name="BCgee"; version="0.1"; sha256="0ad0dj2ymgvkmcmq3jlpmn0pgigdql0xgvcwsbpdydv33a6snr04"; depends=[]; }; BClustLonG = derive2 { name="BClustLonG"; version="0.1.3"; sha256="1p6fm60vhs9l3b120h2l7nz4rf4ckhka7124kzwjd7znax2a336g"; depends=[lme4 MASS mcclust Rcpp RcppArmadillo]; }; - BDEsize = derive2 { name="BDEsize"; version="1.2"; sha256="1b2lms4nmn6gfjmnjq1vq1g3s1ikv7pl4xpbsxfrph14g6awidax"; depends=[fpow ggplot2 shiny shinyalert]; }; + BDEsize = derive2 { name="BDEsize"; version="1.5"; sha256="1bkp6qvw6zl67knqk766wvpg0iiz3zyf4y3az6hwifv96nd5xhjj"; depends=[fpow ggplot2]; }; BDP2 = derive2 { name="BDP2"; version="0.1.3"; sha256="14m85sigx6hk0qzhfgih43m2lxp9xczmp9g3z4pping6msbnbdrz"; depends=[rmarkdown shiny shinyBS]; }; BDWreg = derive2 { name="BDWreg"; version="1.2.0"; sha256="07j6dy69q1as1nwgp2790wzpzmjich2256cddhl7n3h2rs1dja74"; depends=[coda doParallel DWreg foreach MASS]; }; - BDgraph = derive2 { name="BDgraph"; version="2.63"; sha256="05q6dbvdnxmh7myvw60zqcqx16f80i8d6qa4y7xnfkx02l9lwiyc"; depends=[igraph]; }; + BDgraph = derive2 { name="BDgraph"; version="2.64"; sha256="0pnzbw09c7amsvj8l4p1jnmss4rkbr1dsmagiygh8lj5fbrklgr4"; depends=[igraph]; }; BE = derive2 { name="BE"; version="0.1.2"; sha256="0y67jvlakpga21r0gxmbp0kdmnvcvikgnjsi5g715vh79612sbb2"; depends=[rtf]; }; BEACH = derive2 { name="BEACH"; version="1.3.1"; sha256="0biq6c74k8vb8ykafzf3blyi08rp65x1vaw3bfpwdc1ihc9wrgjr"; depends=[devtools DT haven plyr rJava rtf sas7bdat shiny WriteXLS xtable]; }; + BED = derive2 { name="BED"; version="1.4.4"; sha256="1hbdjxh695607ppmk39xclh26k1bq9hrysyp8nc5axhhg1drpiff"; depends=[dplyr DT htmltools miniUI neo2R readr rstudioapi shiny stringr visNetwork]; }; BEDASSLE = derive2 { name="BEDASSLE"; version="1.5"; sha256="1bz3lr0waly9vj9adwhmgs3lq7zjdkcbvm3y9rnn72qlrwmv5fbn"; depends=[emdbook MASS matrixcalc]; }; BEDMatrix = derive2 { name="BEDMatrix"; version="2.0.3"; sha256="1pq333x1shxw3wcqgcb4gqg6rwa0hyc24rib235q4zg10r2gyrbm"; depends=[crochet]; }; BENMMI = derive2 { name="BENMMI"; version="4.3-7"; sha256="1v96g4l1zkpvvx8jdifnafyaz4ml8v1bxbl97r1n5n6mgw88gk77"; depends=[benthos dplyr ggplot2 jsonlite knitr markdown purrr readr tidyr xtable]; }; BEST = derive2 { name="BEST"; version="0.5.2"; sha256="0mx5j6hxxvs9mc2ss2wyavdylh857833bsci3yi6lljidv9g28zc"; depends=[coda HDInterval rjags]; }; BESTree = derive2 { name="BESTree"; version="0.5.2"; sha256="0yij6xdlvhbqifckaylgbhszwwp38d9x6vbpr1nl40mwwnv4bswz"; depends=[plyr]; }; - BET = derive2 { name="BET"; version="0.2.0"; sha256="04dx2338ahkhxwc69cvv5vpy70q48prbf79pmrxwiw6xbbn265bs"; depends=[Rcpp]; }; + BET = derive2 { name="BET"; version="0.3.7"; sha256="1ksh6r072370gkjlr8ggwnc1cn4rgwirzccddgp0jkg41fg73f99"; depends=[Rcpp]; }; BETS = derive2 { name="BETS"; version="0.4.9"; sha256="0daixk7mqmk2jq35i7mjaslz11gxbnnjgwxfvj8x1s88vz9l74sm"; depends=[DBI digest dplyr DT dygraphs forecast foreign ggplot2 grnn htmltools httr lubridate miniUI plotly rjson rmarkdown RMySQL rstudioapi rvest seasonal shiny sqldf stringr urca webshot xml2 zoo]; }; - BFS = derive2 { name="BFS"; version="0.2.5"; sha256="0qcqgxzj00n04p20w6hm60lcnccl2mpbxn9mri0x0wdad587jfgi"; depends=[janitor magrittr pins progress purrr pxR rvest tibble xml2]; }; - BFpack = derive2 { name="BFpack"; version="0.3.1"; sha256="1bzcbpb1wwln0panpfgbkqfqnls002z229nqhkb5f9m5gyi78rv4"; depends=[bain extraDistr lme4 MASS Matrix mvtnorm pracma]; }; + BFS = derive2 { name="BFS"; version="0.3.0"; sha256="1b9mqiz8frykn8ckmxa4q41fyd5kk8804bpw71xfzjc1ii582fn5"; depends=[dplyr janitor magrittr pins progress purrr pxR rvest tibble tidyRSS xml2]; }; + BFpack = derive2 { name="BFpack"; version="0.3.2"; sha256="04rb48wdab23i20lv7s2a2dafxxyvvl9zxpl17var038v6rd02vs"; depends=[bain extraDistr lme4 MASS Matrix mvtnorm pracma]; }; BGData = derive2 { name="BGData"; version="2.2.0"; sha256="1pn8vwpinn6l6h3lsfpszrp0m2wc3896pi408rjxk8ali0np0182"; depends=[BEDMatrix bigmemory bit crochet ff LinkedMatrix symDMatrix synchronicity]; }; BGGE = derive2 { name="BGGE"; version="0.6.5"; sha256="1h76c40y45xhf2vp9g0q5j9lfwh16q9axbk5c9aqn4md008xr1j2"; depends=[]; }; BGGM = derive2 { name="BGGM"; version="2.0.3"; sha256="0nybs1x2as01cnpqakls1v63y9c6sj074s5cfkhahaaipig1ivp8"; depends=[BFpack GGally ggplot2 ggridges MASS mvnfast network Rcpp RcppArmadillo RcppDist RcppProgress Rdpack reshape sna]; }; BGLR = derive2 { name="BGLR"; version="1.0.8"; sha256="15cv5k44yj5cws9jjd70hvrkm8gzn5x4hfx408n2fbqbv289b5jy"; depends=[truncnorm]; }; - BGPhazard = derive2 { name="BGPhazard"; version="2.0.1"; sha256="1bpj644mcfy1lx9f611zymsc8znr250xwms16rwsbrplifwgpylp"; depends=[dplyr ggplot2 ggthemes gridExtra magrittr purrr readr rlang survival tibble]; }; + BGPhazard = derive2 { name="BGPhazard"; version="2.1.0"; sha256="0bxqr5anazi4icl6zn01yrs13wimja9q05gqyf1gg3dwfcg0z3vz"; depends=[Brobdingnag dplyr ggplot2 ggthemes gridExtra magrittr progress purrr readr rlang stringr survival tibble tidyr]; }; BGSIMD = derive2 { name="BGSIMD"; version="1.0"; sha256="0xkr56z8l72wps7faqi5pna1nzalc3qj09jvd3v9zy8s7zf5r7w4"; depends=[]; }; - BGVAR = derive2 { name="BGVAR"; version="2.1.5"; sha256="0m419i2yrhk3yh8zi3z4bv5gcz4vxrz2ic8pd4xdv0y0m9x6z817"; depends=[abind bayesm coda GIGrvg knitr MASS Matrix Rcpp RcppArmadillo RcppProgress stochvol xts zoo]; }; + BGVAR = derive2 { name="BGVAR"; version="2.2.0"; sha256="1fnw52qqcvm1ja4974pjsw178zmn9axcv1p0vn0qj847rd6qkxhm"; depends=[abind bayesm coda GIGrvg knitr MASS Matrix Rcpp RcppArmadillo RcppParallel RcppProgress stochvol xts zoo]; }; BGmisc = derive2 { name="BGmisc"; version="0.1"; sha256="15xgm3n3hn5zkrvyfcylyz5q3zah0155914a0rck0ipihb45sbbl"; depends=[Matrix]; }; - BH = derive2 { name="BH"; version="1.72.0-3"; sha256="1ay8vb6i730lipg8b8g3893vqglhw2kqpc29lwdrxdkb66iw33l8"; depends=[]; }; + BH = derive2 { name="BH"; version="1.75.0-0"; sha256="0nkgvl5qjs2a7jv0ncsrl4fqaw2pdaj7a1pncdv6kp874sci0k5f"; depends=[]; }; BHAI = derive2 { name="BHAI"; version="0.99.2"; sha256="1hawa55mk590is8ziav7fdszsa3a42bqb0znzqsazz5lkg4daaa7"; depends=[MCMCpack plotrix prevtoinc]; }; BHH2 = derive2 { name="BHH2"; version="2016.05.31"; sha256="1m4fcx979nbm97hi89vbjjix0sx6qhdzs486risck9bi7yzih5k4"; depends=[]; }; BHMSMAfMRI = derive2 { name="BHMSMAfMRI"; version="1.3"; sha256="1cha6bw0zvv30y2hjl1a4d04g1r80dfa7r7zi63q5jjnnbklbswg"; depends=[oro_nifti wavethresh]; }; - BHSBVAR = derive2 { name="BHSBVAR"; version="2.1.0"; sha256="16d1jn96qwk569zy49qbxspayi3p6q826mhpizdpnwd1044lcllv"; depends=[Rcpp RcppArmadillo]; }; - BHTSpack = derive2 { name="BHTSpack"; version="0.5"; sha256="1sz99sgxhiajxca5bx2ns9g9qs9ymsvh8i5882nlp7c78qxmqc4g"; depends=[R2HTML xtable]; }; + BHSBVAR = derive2 { name="BHSBVAR"; version="3.0.0"; sha256="0z3zh57azaambcg3xjfyrmy9nj1bc4w166fni71s727y4h6cdlr1"; depends=[Rcpp RcppArmadillo]; }; + BHTSpack = derive2 { name="BHTSpack"; version="0.6"; sha256="01y3ly83i70lkg2kgbw1r7r1g4k9rk41qyzzscbp8zgc9z63ll8z"; depends=[R2HTML xtable]; }; + BI = derive2 { name="BI"; version="1.0.0"; sha256="192qdw2ag8sdw5v7xsc19y2a6w7gs58lnlh0yakc2i0jjad3iyw5"; depends=[]; }; BICORN = derive2 { name="BICORN"; version="0.1.0"; sha256="0mqk8vgp6jdk7f0paa06yqlibkd1y3vs69pg7i9mkvxmda7p4nkq"; depends=[]; }; BIEN = derive2 { name="BIEN"; version="1.2.4"; sha256="1dagrs54ciagm2mgqrvxl6k2akahr0qk63ifxqnks7iljm0x1gw6"; depends=[ape DBI doParallel fasterize foreach raster rgdal rgeos RPostgreSQL sf sp]; }; BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="3.3-12"; sha256="1kphczvj3rxyjvi93cx2j714scvmmpqv5wrg5pdyy8l891jxsr89"; depends=[miceadds Rcpp RcppArmadillo]; }; - BIGDAWG = derive2 { name="BIGDAWG"; version="2.3.1"; sha256="19dc4rsy8w53jdhvmc63pbd769m5sv5s0n4jz71qmvvnh76jaw82"; depends=[haplo_stats httr knitr XML]; }; - BIGL = derive2 { name="BIGL"; version="1.6.0"; sha256="1nrb8856vp97krnwmnj8vb8hwcqncs51nqhmwlimc4j34n39h3m4"; depends=[ggplot2 MASS minpack_lm nleqslv numDeriv progress rgl robustbase scales]; }; + BIGDAWG = derive2 { name="BIGDAWG"; version="2.3.6"; sha256="1mlk2b293lr2vj0ydh96p9ynbvv67jnkqm9qxz9kcxq65b2i5cv3"; depends=[haplo_stats httr XML]; }; + BIGL = derive2 { name="BIGL"; version="1.6.2"; sha256="144343w7asm9rkkw2dhvfqyvlvb0a83m623bbxkqhlc56y7g4r22"; depends=[ggplot2 MASS minpack_lm nleqslv numDeriv progress rgl robustbase scales]; }; BINCOR = derive2 { name="BINCOR"; version="0.2.0"; sha256="0x2s82jql429shk70bhjdy9kamz8dz5ymsxj6kp8ga1711bpwyq6"; depends=[pracma]; }; BIOM_utils = derive2 { name="BIOM.utils"; version="0.9"; sha256="0xckhdvf15a62awfk9rjyqbi6rm7p4awxz7vg2m7bqiqzdll80p7"; depends=[]; }; - BIOMASS = derive2 { name="BIOMASS"; version="2.1.4"; sha256="0ghpw6w9w4llf835x18k3v9fiw2girkhriiqm1ny8hqnx1p5iaps"; depends=[data_table jsonlite minpack_lm proj4 rappdirs raster sp]; }; BIOdry = derive2 { name="BIOdry"; version="0.8"; sha256="1zga8g50wjnnz2h9b3ak9q67qnl1f14cq6hvdzf9f84pphsnpasa"; depends=[ecodist nlme]; }; - BIRDS = derive2 { name="BIRDS"; version="0.1.2"; sha256="11iir53h7a4sqsqpp08yawbwwpwpsn34cxadqzgnq6ygh28w6niz"; depends=[data_table dbscan dplyr esquisse geosphere leaflet lubridate magrittr mapedit nnet rgdal rgeos rlang sf shiny shotGroups sp stringr taxize tidyr xts]; }; + BIRDS = derive2 { name="BIRDS"; version="0.1.27.1"; sha256="1fk26yipk7xwf2dwiypszbijbvqcihj5fgdymxipcvl0jqla4mw8"; depends=[data_table dbscan dplyr geosphere leaflet lubridate magrittr nnet rgdal rgeos rlang sf shotGroups sp stringr taxize tidyr xts zoo]; }; BIS = derive2 { name="BIS"; version="0.2.1"; sha256="0mngmchgc46wc9a7ksyqrvj6k46nm4ih7x69k3xijfia9bgkym0v"; depends=[dplyr readr rvest tidyr xml2]; }; BKPC = derive2 { name="BKPC"; version="1.0.1"; sha256="17gmhf6qq8jn2xzkqvjq60xzy0slz6kgfpd0d6hlpnf30ww7q923"; depends=[kernlab]; }; + BLCOP = derive2 { name="BLCOP"; version="0.3.3"; sha256="08y9vmx3cknjvk6ngfwxlfnc03cqpj97i1ijrs1cw5sahjc0vmhc"; depends=[fBasics fMultivar fPortfolio knitr MASS quadprog rmarkdown RUnit timeSeries]; }; BLModel = derive2 { name="BLModel"; version="1.0.2"; sha256="0l5f2v5ggadmrci3qhhmxm3j9i6jii0anq5rv5vk50y2qzii2q15"; depends=[]; }; BLOQ = derive2 { name="BLOQ"; version="0.1-1"; sha256="0qs4pnzpfwkii6wpd8my34zw9k003b3is0y0aj1lhcm0qnn1p8h4"; depends=[maxLik mvtnorm]; }; BLPestimatoR = derive2 { name="BLPestimatoR"; version="0.3.2"; sha256="0prc2m3hixv8hmnyhr5549406ln509llkhpqra2ifpzif0waw704"; depends=[Formula Matrix mvQuad numDeriv randtoolbox Rcpp RcppArmadillo]; }; @@ -323,7 +332,7 @@ in with self; { BMRV = derive2 { name="BMRV"; version="1.32"; sha256="1j1cwjk3l7f06nqdwrqdyhzm43bb8hj5wgdd14zc1grxyfc9ya95"; depends=[BH]; }; BMS = derive2 { name="BMS"; version="0.3.4"; sha256="0z3mk1xd1fphf80kdbashkn04jwsr2bghms4d7nav3pw73q41wql"; depends=[]; }; BMT = derive2 { name="BMT"; version="0.1.0.3"; sha256="1vdah5bsn41s2qriq15xi7dw9qzngaacmn5gk6yc7hi89dwyy3yj"; depends=[fitdistrplus partitions]; }; - BMTAR = derive2 { name="BMTAR"; version="0.1.0"; sha256="016pjaddszisj8rgq0k82zss37zkiij5wa9q884w2zxk5c245sy7"; depends=[Brobdingnag doParallel expm ggplot2 ks MASS MCMCpack mvtnorm]; }; + BMTAR = derive2 { name="BMTAR"; version="0.1.1"; sha256="0c70vkgv2sdci33yrk2n297k105wnlxj1qchskdparkiipf47xsh"; depends=[Brobdingnag doParallel expm ggplot2 ks MASS MCMCpack mvtnorm]; }; BMTME = derive2 { name="BMTME"; version="1.0.19"; sha256="07iw6aqcwn4a29b85cavfw6hp66csdzlaqwas40zr5ga3kp72j51"; depends=[BGLR doSNOW dplyr foreach matrixcalc mvtnorm progress Rcpp RcppArmadillo snow tidyr]; }; BMisc = derive2 { name="BMisc"; version="1.4.2"; sha256="03bhq5gf4x959sam0mhk3sm9h6q6ylbwqp3399l00k7zhg6n7dw8"; depends=[tidyr]; }; BNDataGenerator = derive2 { name="BNDataGenerator"; version="1.0"; sha256="17zi83jhpn9ygavkpr9haffvd4622sca18jzzxxxmfq0ilrj201g"; depends=[]; }; @@ -331,35 +340,36 @@ in with self; { BNPMIXcluster = derive2 { name="BNPMIXcluster"; version="1.3"; sha256="1dnylvag24zqp93acdbn0ilbdzbn250pjjp6hjdd9d1zvla2ck85"; depends=[gplots MASS matrixcalc mvtnorm plyr Rcpp RcppArmadillo truncnorm]; }; BNPTSclust = derive2 { name="BNPTSclust"; version="2.0"; sha256="1ymvklv6d9684xzwdkvaxdjd1q20xmsf6kkfibn2wphlaqs2rh2n"; depends=[MASS mvtnorm]; }; BNPdensity = derive2 { name="BNPdensity"; version="2020.3.4"; sha256="0775fcf5y78ibmhl5fljrlvznn1a74s5ihldb6wgixmm4c0xmz3x"; depends=[coda dplyr ggplot2 gridExtra survival tidyr viridis]; }; - BNPmix = derive2 { name="BNPmix"; version="0.2.6"; sha256="1r359fxiir0avy5pynszj839hxj17g0ypy8zqfkchmapdzh04zhj"; depends=[coda ggplot2 ggpubr Rcpp RcppArmadillo]; }; + BNPmix = derive2 { name="BNPmix"; version="0.2.8"; sha256="1a5bwmj7mk2m1ncg1cp90nq2n4l5xpkwxs19agb6h2d7hk2y20b6"; depends=[coda ggplot2 ggpubr Rcpp RcppArmadillo RcppDist]; }; BNSL = derive2 { name="BNSL"; version="0.1.4"; sha256="0nrlx55364kgvkdpyaimgjxwnzmmdl1gmvyv3wkm8n2jyki92xxp"; depends=[bnlearn igraph Rcpp]; }; - BNSP = derive2 { name="BNSP"; version="2.1.4"; sha256="0685f979zr8mbisbzf27n95064pgr7amk41c024w9gw1p0dj1lai"; depends=[coda corrplot cubature Formula ggplot2 gridExtra label_switching mgcv plot3D plyr threejs]; }; + BNSP = derive2 { name="BNSP"; version="2.1.5"; sha256="0ccabfr5fzh59j3nxwbh8pb74is9vz4is2s8anbrc3nhlhr8s8p3"; depends=[coda corrplot cubature Formula ggplot2 gridExtra label_switching mgcv plot3D plyr threejs]; }; BNrich = derive2 { name="BNrich"; version="0.1.1"; sha256="0m3cz7npc7mwq2vj68hllbd2vf5xqw00jaxv1pm3c28mq7pb459j"; depends=[bnlearn corpcor glmnet graph]; }; BOG = derive2 { name="BOG"; version="2.0"; sha256="0lz5af813b67hfl4hzcydn58sjhgn5706n2h44g488bks928k940"; depends=[DIME hash]; }; - BOIN = derive2 { name="BOIN"; version="2.7.1"; sha256="1rpb90wpa9rgbxhxi1nn83k1vd8ixv9gbh738y6rrnnk3cp95vk2"; depends=[Iso]; }; - BOJ = derive2 { name="BOJ"; version="0.2.2"; sha256="0xr55jif6al9qyz25k7ab0k938z93j0gzwf6njwv0xnp92j3a30i"; depends=[dplyr readr rvest tidyr tidyselect xml2]; }; - BOSSreg = derive2 { name="BOSSreg"; version="0.1.0"; sha256="1nngs9j1hbb9ws423dxccjxwpkc5zl6l0zv46gb0v6m8y11d077b"; depends=[Matrix Rcpp RcppArmadillo]; }; + BOIN = derive2 { name="BOIN"; version="2.7.2"; sha256="03h6s1nn87xgkk830wls06mgflg0arq084k74gfp1k4wccwkjr5y"; depends=[Iso]; }; + BOJ = derive2 { name="BOJ"; version="0.2.3"; sha256="0wphdsd9v74jyfj3mjc2mm23lwfls3q4kxc3ii0rvvdlma2xm49f"; depends=[dplyr readr rvest tidyr tidyselect xml2]; }; + BOSSreg = derive2 { name="BOSSreg"; version="0.2.0"; sha256="0ln4nx0jlvz5kqk9qkcl8a2cyhsdcqqfs5112qcaabjiwjnvla7w"; depends=[glmnet Matrix Rcpp RcppArmadillo]; }; BPEC = derive2 { name="BPEC"; version="1.3.1"; sha256="0jvq56cq1wnhwd6wvg02hbx4b5vc2hz1lyxi63pl41rk0xva615a"; depends=[ape coda fields ggmap ggplot2 igraph maptools mvtnorm OpenStreetMap phytools sp]; }; BPM = derive2 { name="BPM"; version="1.0.0"; sha256="17k2d1xjfz85ygx0xnh6yqca9nyypd32d7sbna3k33ynsjqay3x8"; depends=[limma]; }; BRDT = derive2 { name="BRDT"; version="0.1.0"; sha256="1yv2fh4cc9h35l8cngpxnqa83a7bx79pr7c1gp9h84p1pigg8282"; depends=[]; }; BRETIGEA = derive2 { name="BRETIGEA"; version="1.0.0"; sha256="176z7ajyfcfljv36d2sa15cvw047rsir3gn0l4lxmcyliw93r4lv"; depends=[]; }; - BRISC = derive2 { name="BRISC"; version="0.2.0"; sha256="0dnkf4ld1blbadmxvgd0k021ihszrf2x19qypvv8jvgfrgcr8ax7"; depends=[matrixStats pbapply RANN rdist]; }; + BRISC = derive2 { name="BRISC"; version="1.0.1"; sha256="0q8qkw718ivg45lgk566fpv8ya3qqlg3k7npxj2325wcha58bl35"; depends=[matrixStats pbapply RANN rdist]; }; BRL = derive2 { name="BRL"; version="0.1.0"; sha256="13qi78v3057qn4hfby14sp26hy3ibl50f06x8gpak6gi76g8bhwi"; depends=[]; }; BRugs = derive2 { name="BRugs"; version="0.9-0"; sha256="0f0v30mvfw97vfwzkjpqzf2894b2yhksja0xhpranprk135srxp0"; depends=[coda]; }; - BSBT = derive2 { name="BSBT"; version="1.0.0"; sha256="191c3scnlbbqs16xj4mfk3k8vl53gjw1dif827dysac9wi1m0ryc"; depends=[igraph lifecycle MASS]; }; + BSBT = derive2 { name="BSBT"; version="1.1.0"; sha256="1a45ivld1j4nmy6v3giwicia0mppdms0xah9qns8m55lz5bbsj0p"; depends=[expm igraph MASS]; }; BSDA = derive2 { name="BSDA"; version="1.2.0"; sha256="0gs33yyca45jd4f5k5f7qid4ayw2rnl2wl7a6m7vf39dfx7ympm2"; depends=[e1071 lattice]; }; BSGS = derive2 { name="BSGS"; version="2.0"; sha256="08m8g4zbsp55msqbic4f17lcry07mdn0f5a61zdcy2msn2ihzzf9"; depends=[batchmeans MASS plyr pscl]; }; BSGW = derive2 { name="BSGW"; version="0.9.2"; sha256="1q6qvm9yxh35wywrzs3kr31jsa0bmbwrqh0r3qjc0dzi6q8n6pjy"; depends=[doParallel foreach MfUSampler survival]; }; - BSL = derive2 { name="BSL"; version="3.2.0"; sha256="1qv7p6x7gb78qdif32c1n16rkn4yaw4905amz9x8w13mffia682n"; depends=[coda copula doRNG foreach ggplot2 glasso gridExtra MASS mvtnorm Rcpp RcppArmadillo Rdpack stringr whitening]; }; BSPADATA = derive2 { name="BSPADATA"; version="1.0"; sha256="1g709i0icxlxq2ljb2sm5iyc8ljqxadi62xc4mg702fsgl0x5ny9"; depends=[mvtnorm pscl spdep]; }; BSS = derive2 { name="BSS"; version="0.1.0"; sha256="1lxmrdmr6c0niqz61kc9ybzszprn66jyinfy4dr9r6i161gvs4qg"; depends=[hypergeo MASS phangorn]; }; BSSasymp = derive2 { name="BSSasymp"; version="1.2-1"; sha256="0w141yxqpck59n85rjc6d3qy6bwhk1z80zsm21hda0bgfwy9v6wy"; depends=[fICA JADE]; }; - BSW = derive2 { name="BSW"; version="0.1.0"; sha256="0wh8m09nqzvsij8q8mdyr5yafdq7h568s28vih2wpplp0sv01945"; depends=[Matrix matrixStats quadprog]; }; + BSSprep = derive2 { name="BSSprep"; version="0.1"; sha256="0dkhx8vx9kg902i6nzkzbighf2szq12l0p8iwinlpb2qdf526lk6"; depends=[Rcpp RcppArmadillo]; }; + BSW = derive2 { name="BSW"; version="0.1.1"; sha256="0l6sw8lyk9mxfdw4s72hz6a0b30gi2a2vlcndkgahjlym6i5bz83"; depends=[Matrix matrixStats quadprog]; }; BSagri = derive2 { name="BSagri"; version="0.1-10"; sha256="096l2ilr4x2fbjxchkksxkbiyaf7wwdmzn4xyjx001w873x9dgf6"; depends=[boot gamlss MCPAN mratios multcomp mvtnorm]; }; BTLLasso = derive2 { name="BTLLasso"; version="0.1-11"; sha256="1nz90jg74xzcwjxi9ppp7a78bg4976h2cmvlz140ss5403pnfbsk"; depends=[Matrix psychotools Rcpp RcppArmadillo stringr TeachingDemos]; }; - BTM = derive2 { name="BTM"; version="0.3.4"; sha256="0b0ksk8k7gr53v4jgnm55ki4vhvk1c5p7wnfr8xwffgd8iml345h"; depends=[Rcpp]; }; + BTM = derive2 { name="BTM"; version="0.3.5"; sha256="1x6bncb7r97z8bdyxnn2frdi9kyawfy6c2041mv9f42zdrfzm6jb"; depends=[Rcpp]; }; BTSPAS = derive2 { name="BTSPAS"; version="2021.1.1"; sha256="1clppkr1bflqp1kvy8k7vnr1bjaqy135k7zn5mxfrnkh5hhcj7zm"; depends=[actuar coda data_table ggforce ggplot2 gridExtra plyr R2jags reshape2 scales]; }; BTYD = derive2 { name="BTYD"; version="2.4.2"; sha256="0yccq603vxjzhssb59icmps4iz0sn52wirwajx7995rz0zkfgfvh"; depends=[dplyr hypergeo Matrix optimx]; }; + BTYDplus = derive2 { name="BTYDplus"; version="1.2.0"; sha256="1shai7kij20g3isd6l29i696pkzymr0qq2i9gzfsxmvdb4g4pcm2"; depends=[bayesm BTYD coda data_table mvtnorm Rcpp]; }; BTdecayLasso = derive2 { name="BTdecayLasso"; version="0.1.0"; sha256="0x1s2zvv3vnapk5wp8582zwflsqvgc8khkvl5ch9i70v739jxp15"; depends=[ggplot2 optimr]; }; BUCSS = derive2 { name="BUCSS"; version="1.2.1"; sha256="1nf0xpy5r49yfd0xydzxxxrc6isj14s8lswrf5nhh7g60nkkwcxr"; depends=[]; }; BVAR = derive2 { name="BVAR"; version="1.0.1"; sha256="0nfq5ffa600hx3cbr85jbwawdfczrnr1dvg80qqz74v6lh3k8j7x"; depends=[mvtnorm]; }; @@ -369,20 +379,19 @@ in with self; { BWStest = derive2 { name="BWStest"; version="0.2.2"; sha256="02amzlfprmw5pyis0dg0kg0x8xqh50a4vfdcxxmklrzik3b1vzzs"; depends=[memoise Rcpp]; }; BaBooN = derive2 { name="BaBooN"; version="0.2-0"; sha256="145q2kabjks2ql3m48sfjis5y35l8rcqnr5s176viv9yhfafn351"; depends=[coda Hmisc MASS nnet Rcpp RcppArmadillo]; }; BaM = derive2 { name="BaM"; version="1.0.2"; sha256="017x6i8glbbx8aqglyglv9pvcss4vg6l6rnwzaa4vbln95y4582d"; depends=[dlm MASS mice]; }; - BaMORC = derive2 { name="BaMORC"; version="1.0.1"; sha256="133j1rhfvsq1qxr7hxp7gfarbj8lfimirr73gyyrpfkq1vjxmhc9"; depends=[BMRBr data_table DEoptim devtools docopt httr jsonlite RBMRB readr stringr tidyr]; }; BaPreStoPro = derive2 { name="BaPreStoPro"; version="0.1"; sha256="0zyyyrr5h8dhjsmgaii8jmb8ignvixpc9nzbfishw9yymjswvm57"; depends=[]; }; BaSTA = derive2 { name="BaSTA"; version="1.9.4"; sha256="1j092gsdip7rpw0g74ha0kjsrqpp5swi7wd4sxlmx6zarcqnxlal"; depends=[snowfall]; }; BaTFLED3D = derive2 { name="BaTFLED3D"; version="0.2.11"; sha256="0gab9iz1ra72hw8j31n97ysyr3cclhgvdxriyjk8wwv2nrmbw12h"; depends=[foreach iterators R6 RColorBrewer rTensor]; }; BacArena = derive2 { name="BacArena"; version="1.8.2"; sha256="1fv3hmr8frqgdl22cvp5w5089ppmqzw42llw2ls054dvsdadlqm9"; depends=[deSolve ggplot2 glpkAPI igraph Matrix plyr R_matlab Rcpp RcppArmadillo RcppEigen ReacTran reshape2 stringr sybil]; }; BalanceCheck = derive2 { name="BalanceCheck"; version="0.2"; sha256="0aal641vfbjk3w6ipwbqqmm9nnxs962hjmpph9wnqaqk5r6s7brs"; depends=[ade4 mvtnorm]; }; BalancedSampling = derive2 { name="BalancedSampling"; version="1.5.5"; sha256="01ayvjfs83dbnk0m9xb7y9rnxxpfpb6w4qjdffd6hdhcn2s5f73d"; depends=[Rcpp SamplingBigData]; }; - Ball = derive2 { name="Ball"; version="1.3.9"; sha256="1cznrlgj75xwgpqqsnl0vnjd7pwvkna0cakdz4bcya4hn74dx27y"; depends=[gam mvtnorm survival]; }; + Ball = derive2 { name="Ball"; version="1.3.11"; sha256="0hblv7vs23dhypvvilb77iir7flxmis1azhpkaxf8hmzhs3q3hnf"; depends=[gam mvtnorm survival]; }; BallMapper = derive2 { name="BallMapper"; version="0.2.0"; sha256="1hf94d41cks8mbrb985mpd0nqgirvm096cfv7bsy0182bbxlk6s1"; depends=[fields igraph networkD3 scales stringr testthat]; }; BarBorGradient = derive2 { name="BarBorGradient"; version="1.0.5"; sha256="0g2g7hrm23as1xbj79g48r8sj3gsj66fmi895jqlqfbqrl2fl7a5"; depends=[]; }; BarcodingR = derive2 { name="BarcodingR"; version="1.0-3"; sha256="03x26mrlvg00rnfh74wacpgbdk7xr2lq4yd0bx4q2442nli54rdv"; depends=[ape class nnet sp]; }; Barnard = derive2 { name="Barnard"; version="1.8"; sha256="1ki58hjs5kpmp76kwj1qi6hwmdvjphqb1lvrlhnmkgqxg4hw4vqg"; depends=[]; }; Barycenter = derive2 { name="Barycenter"; version="1.3.1"; sha256="0yhc0wwjqms569gnm8z2l9hgcbw8lyy437ynkij47pa4c1a1qvjy"; depends=[Rcpp RcppArmadillo]; }; - BaseSet = derive2 { name="BaseSet"; version="0.0.14"; sha256="0x1171g819vkh23v96l72jvrmmala478jcpvbm9z9z1c7qxhwwbx"; depends=[dplyr magrittr rlang]; }; + BaseSet = derive2 { name="BaseSet"; version="0.0.16"; sha256="17czmfp5v0n3lnh9xacs58vsgq63j3kp365xcci5fvayjh1fpxks"; depends=[dplyr magrittr rlang]; }; BasketballAnalyzeR = derive2 { name="BasketballAnalyzeR"; version="0.5.0"; sha256="1bad287llg89smqg43lgz2hdkjg3l39mh4k82avgb52xwqp5gjxc"; depends=[circlize corrplot dendextend directlabels dplyr GGally ggnetwork ggplot2 ggplotify ggrepel gridExtra hexbin magrittr MASS network operators PBSmapping plyr readr rlang scales sna sp statnet_common stringr tidyr]; }; BatchExperiments = derive2 { name="BatchExperiments"; version="1.4.2"; sha256="0zvcpgzhbna6p37jlf57j7mzrvh5xs5w17janmv9v4210cpbzi1q"; depends=[backports BatchJobs BBmisc checkmate data_table DBI RSQLite]; }; BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="2.6.1"; sha256="0jm4bswczmha7p8xb78n4q3wxyjxmi7ya5zrfm0gb31g7r275wba"; depends=[crayon curl dplyr furrr future lubridate purrr quantmod rvest scales stringr tibble tidyr XML zoo]; }; @@ -399,6 +408,7 @@ in with self; { BayesCombo = derive2 { name="BayesCombo"; version="1.0"; sha256="01rzjja0xzvqyjivl8a9da13v13ylm4dwv4f27cmgz2znakfg5y8"; depends=[]; }; BayesComm = derive2 { name="BayesComm"; version="0.1-2"; sha256="1rrbvwcfm93cw0m33g0zn6nyshfjc97kb3fby9cga0zaixc0a8rk"; depends=[abind coda mvtnorm Rcpp RcppArmadillo]; }; BayesDA = derive2 { name="BayesDA"; version="2012.04-1"; sha256="0fp27cmhw8dsxr4mc1flm6qh907476kph8ch2889g9p31xm1psjc"; depends=[]; }; + BayesDesign = derive2 { name="BayesDesign"; version="0.1.1"; sha256="1h69a18wp2z96a002x154d2vd1imzap3zm7yfssm5dh7igha18zc"; depends=[]; }; BayesESS = derive2 { name="BayesESS"; version="0.1.19"; sha256="023r5pxqa2ll3vyfmchdlcg6ay0qixphz24078g1immqp43mlrxm"; depends=[dfcrm LaplacesDemon MASS MatrixModels MCMCpack Rcpp RcppArmadillo RcppEigen]; }; BayesFM = derive2 { name="BayesFM"; version="0.1.4"; sha256="14m318nxb4aqxni4zm0p6g9pysx81rmay48qglwm98gmdjxigzzk"; depends=[checkmate coda ggplot2 gridExtra plyr]; }; BayesFactor = derive2 { name="BayesFactor"; version="0.9.12-4.2"; sha256="1z083v7is21gm0a458jm5ph3xfdm7mh29a6sg2r1njq82f8x3s3g"; depends=[coda gtools hypergeo Matrix MatrixModels mvtnorm pbapply Rcpp RcppEigen stringr]; }; @@ -407,11 +417,11 @@ in with self; { BayesGPfit = derive2 { name="BayesGPfit"; version="0.1.0"; sha256="1sz0bb102h5fj1yz0k89cvcy0pvsh6rfm06i6lfz3pdhdjszsx00"; depends=[lattice]; }; BayesGWQS = derive2 { name="BayesGWQS"; version="0.0.2"; sha256="0xy71d121hl8mg71cfyqw3j0sjx46qj5bifdk55h7jyfynr80pax"; depends=[coda rjags]; }; BayesLCA = derive2 { name="BayesLCA"; version="1.9"; sha256="11ji5s1njip57zkr4bxwp3agx1ddv7yagm5prn9ckcbasan4rbx1"; depends=[coda e1071 fields MCMCpack nlme]; }; - BayesLN = derive2 { name="BayesLN"; version="0.2.1"; sha256="1km5jq0jxkwafn1ak0srsmxzrkv4vfhgvrkcy25laap1yn95qrvm"; depends=[coda data_table fAsianOptions ghyp lme4 MASS Matrix optimx Rcpp RcppEigen]; }; + BayesLN = derive2 { name="BayesLN"; version="0.2.2"; sha256="1vxbc365g32q6b1rg68fg6dgzavzbq5wzhnwmnygn8pqk9malnxj"; depends=[coda data_table fAsianOptions ghyp lme4 MASS Matrix optimx Rcpp RcppEigen]; }; BayesLogit = derive2 { name="BayesLogit"; version="2.1"; sha256="0w3bzk39sxdskwikcz5i0xwfsll4sqgkpr8vw8jvzlcy6dl3yhis"; depends=[]; }; BayesMFSurv = derive2 { name="BayesMFSurv"; version="0.1.0"; sha256="1yxxzwjh1fgfh7qkzf9dfm3x0vbgb0v4p6bf6b5w14kvm06rzhkg"; depends=[coda FastGP MCMCpack mvtnorm Rcpp RcppArmadillo]; }; BayesMRA = derive2 { name="BayesMRA"; version="1.0.0"; sha256="005pygpa8bmr153naxnag7kn876lqwq34d8pzbj954nivlxl4zaw"; depends=[fields igraph Matrix mvnfast Rcpp RcppArmadillo spam]; }; - BayesMallows = derive2 { name="BayesMallows"; version="0.5.0"; sha256="0m8npkp76z566sam02kdyhfx0jpch8k8cj8j165l7mqz8v7x7b9n"; depends=[cowplot dplyr ggplot2 HDInterval igraph PerMallows purrr Rcpp RcppArmadillo Rdpack relations rlang sets tidyr]; }; + BayesMallows = derive2 { name="BayesMallows"; version="1.0.1"; sha256="1j1h4zsgr3dqc26a40398hf9hcbj2cm3cgp9dahk7yzgyyi6xskd"; depends=[cowplot dplyr ggplot2 HDInterval igraph PerMallows PLMIX purrr Rcpp RcppArmadillo Rdpack relations rlang sets tidyr]; }; BayesMassBal = derive2 { name="BayesMassBal"; version="1.0.0"; sha256="158vwfp5wn9g28fg48zmd95lfsr6flmcdm4igfw4cmgp4w0w69lq"; depends=[coda HDInterval LaplacesDemon Matrix pracma Rdpack tmvtnorm]; }; BayesMixSurv = derive2 { name="BayesMixSurv"; version="0.9.1"; sha256="19kf39881q00pap9afwvvggk4s4w3qpz17b7065nig1mvk8dnp8r"; depends=[survival]; }; BayesNI = derive2 { name="BayesNI"; version="0.1"; sha256="0zvr6rkb5zxgl53xby69d0j3yrfnlcmac6kwkxz77q5616w9dwq0"; depends=[]; }; @@ -419,18 +429,18 @@ in with self; { BayesNetBP = derive2 { name="BayesNetBP"; version="1.5.5"; sha256="0vs8m62arvsc1rp7znr8j1wvljm2r4wcgzk6ry6iy6x6xmwa0z84"; depends=[bnlearn doBy fields graph igraph qtl qtlnet RColorBrewer]; }; BayesPieceHazSelect = derive2 { name="BayesPieceHazSelect"; version="1.1.0"; sha256="0znbmv7crqycdx75jh02h6z8d6cifjszbrldv2yva4mkjxsydag5"; depends=[mvtnorm]; }; BayesPiecewiseICAR = derive2 { name="BayesPiecewiseICAR"; version="0.2.1"; sha256="1qrmw7zmygdzz84p76hyh2d8dx88b8xhbbd7radqm39g35zq5wz6"; depends=[mvtnorm]; }; - BayesPostEst = derive2 { name="BayesPostEst"; version="0.2.1"; sha256="0n2blfdzga93zmf0v94wlcmcyqlvbga50chqyv5pkx2z6l5xhdnc"; depends=[carData caTools coda dplyr ggmcmc ggplot2 ggridges HDInterval R2jags reshape2 rlang ROCR runjags texreg tidyr]; }; + BayesPostEst = derive2 { name="BayesPostEst"; version="0.3.1"; sha256="0pfildzmqdwnj6h2k692ym9i37lwc65jqgjcx6h3cz8spcmzxm8y"; depends=[carData caTools coda dplyr ggplot2 ggridges HDInterval reshape2 rlang ROCR texreg tidyr]; }; BayesProject = derive2 { name="BayesProject"; version="1.0"; sha256="0b1xqw7f9kfbmr8m6fl9d2fpwr364s4a5vdw57l6i5rm6lszyfh5"; depends=[Rcpp RcppEigen Rdpack]; }; BayesRS = derive2 { name="BayesRS"; version="0.1.3"; sha256="0fhvnckabp0z1cdsbjgv3ijnzaxwhrk83fwcflgqbhvm3a9lzr77"; depends=[coda ggplot2 metRology reshape rjags]; }; BayesReversePLLH = derive2 { name="BayesReversePLLH"; version="1.4"; sha256="1wigp9692z0vf1vm3cpbl6wcgp3zyqzfbrkd344hi88421kj1yxj"; depends=[Rcpp RcppArmadillo]; }; BayesS5 = derive2 { name="BayesS5"; version="1.41"; sha256="0vs6s50h4gpxda9lbxfgn76k9kp81l62a6bv22r7ixsjlnd4baql"; depends=[abind Matrix snowfall splines2]; }; BayesSAE = derive2 { name="BayesSAE"; version="1.0-2"; sha256="1xbx9hr254agpcqs1fl7qi7h19fd2bbmjszn44l566n2svgvxwf5"; depends=[coda Formula lattice]; }; - BayesSPsurv = derive2 { name="BayesSPsurv"; version="0.1.1"; sha256="1szzhqr6m8cbl8lrah0aj03pnkva2b7r4ga34fzpard2l6aypbvw"; depends=[ape coda dplyr FastGP ggplot2 MCMCpack Rcpp RcppArmadillo reshape2]; }; + BayesSPsurv = derive2 { name="BayesSPsurv"; version="0.1.2"; sha256="0389hs737yx7np4b7z4yzffs8ysl3y7s6r1aj91yyji63kda3hd5"; depends=[ape coda dplyr FastGP ggplot2 MCMCpack Rcpp RcppArmadillo reshape2]; }; BayesSUR = derive2 { name="BayesSUR"; version="1.2-4"; sha256="0qwqydmikf3ja4z3mwf6r1a6wxqnvkmx2747g38nzhcj53ipgsw0"; depends=[igraph Matrix Rcpp RcppArmadillo tikzDevice xml2]; }; - BayesSampling = derive2 { name="BayesSampling"; version="1.0.0"; sha256="06gy902ksa753hn5p4zmsxaw6qg4qx4prd8n5m2w1300561cfbkl"; depends=[MASS Matrix]; }; + BayesSampling = derive2 { name="BayesSampling"; version="1.1.0"; sha256="1nwwf195b7hly7kjfikizyvgc975g74z6hsm89c1ibfgxlj51bcw"; depends=[MASS Matrix matrixcalc]; }; BayesSenMC = derive2 { name="BayesSenMC"; version="0.1.2"; sha256="0vzvc7xmr39mlhqx0cmqrw2bszmxfbzbyy2l3ssbw2cz0c4xarkj"; depends=[dplyr ggplot2 lme4 Rcpp rstan]; }; BayesSpec = derive2 { name="BayesSpec"; version="0.5.3"; sha256="17gchdijcjhbr2y4glbq9szjh4qmgivzh6p4fllh589da18nzjcr"; depends=[mvtnorm pscl trust]; }; - BayesSurvival = derive2 { name="BayesSurvival"; version="0.1.0"; sha256="1bkadvlz8rb77ivms52s4ic853y6fll4fkaamgyskmacx69897vi"; depends=[ggplot2 survival]; }; + BayesSurvival = derive2 { name="BayesSurvival"; version="0.2.0"; sha256="1kpp0dfcmk86grg13b817py49v071q6p0dh8z22g6x2i8zl1vdfi"; depends=[ggplot2 survival]; }; BayesTree = derive2 { name="BayesTree"; version="0.3-1.4"; sha256="0saca1ln582szqzc2c78z24b1lszzhc9hvsin73kb7r2dlg5ciii"; depends=[nnet]; }; BayesTreePrior = derive2 { name="BayesTreePrior"; version="1.0.1"; sha256="13igmvw1wj8kzfijzsrhdqr52kv4vqrm91i71ay6f7jnkry3spaw"; depends=[]; }; BayesTwin = derive2 { name="BayesTwin"; version="1.0"; sha256="026blnhihbx9bpd63mxhbp0kpvj0lwbj7mg72alyfr2jnrh1n3lp"; depends=[coda foreign matrixStats rjags]; }; @@ -447,40 +457,39 @@ in with self; { BayesianReasoning = derive2 { name="BayesianReasoning"; version="0.3.2"; sha256="1d9s47bkx5m6dsdq4hbflm7x1lax4n9gk3wbvilpybp6gn3bhlm9"; depends=[dplyr ggforce ggplot2 magrittr reshape2 tibble tidyr]; }; BayesianTools = derive2 { name="BayesianTools"; version="0.1.7"; sha256="0330bbnny35h4gsmwg31p3n3i511wrckzmp174ydm55pvsdkhjdg"; depends=[bridgesampling coda DHARMa ellipse emulator gap IDPmisc MASS Matrix msm mvtnorm numDeriv Rcpp tmvtnorm]; }; Bayesiangammareg = derive2 { name="Bayesiangammareg"; version="0.1.0"; sha256="0b0fqmig7vgmlrq2884q0apfd89nn5k4dj8rqjizkkbw4qpzmylb"; depends=[mvtnorm]; }; - Bayesrel = derive2 { name="Bayesrel"; version="0.7.0.2"; sha256="1in4bz0b18qaix5dakfrzl8wpzljpy239pp5dsz2xl0c89iqvb9y"; depends=[coda LaplacesDemon lavaan MASS Rcpp RcppArmadillo Rdpack]; }; + Bayesrel = derive2 { name="Bayesrel"; version="0.7.0.7"; sha256="1v1cg1b0hh28n6c8grs33vcflf7bmx72afky994brdv23sr5javv"; depends=[coda LaplacesDemon lavaan MASS Rcpp RcppArmadillo Rdpack]; }; BcDiag = derive2 { name="BcDiag"; version="1.0.10"; sha256="1gyinmx5wn2kk70hiy28ghilkhfirfjbfqdrqq5h3wfb4khnq6pz"; depends=[fabia]; }; - Bchron = derive2 { name="Bchron"; version="4.7.3"; sha256="045hr118yyny9qbm9n0i85zrzx70bj0d5mbllak782sj9wspll3l"; depends=[coda dplyr ggforce ggplot2 ggridges magrittr MASS mclust purrr scales stringr]; }; - Bclim = derive2 { name="Bclim"; version="3.1.2"; sha256="0dd4fx3rlljj3zb1m8q1bam1bswg497l3y8k0h0mkvjn94b4jbag"; depends=[ggplot2 MASS mclust statmod]; }; - BeSS = derive2 { name="BeSS"; version="1.0.9"; sha256="1fslwh0fyhgaqrlhn6gsiq8rs3xcylwva98dqvch0hjg6sckccww"; depends=[glmnet Matrix Rcpp RcppEigen survival]; }; + Bchron = derive2 { name="Bchron"; version="4.7.4"; sha256="0wpjswg90l8i3ssg9kji0nxy0wqr9lly3hq4cmgicjc4l51blrjm"; depends=[coda dplyr ggforce ggplot2 ggridges magrittr MASS mclust purrr scales stringr]; }; + BeSS = derive2 { name="BeSS"; version="2.0.3"; sha256="09zxpzcaj13fn38cwd0xk0254aphb3jn1wdwn9hiq9vapfsgn0dx"; depends=[glmnet Matrix Rcpp RcppEigen survival]; }; BeastJar = derive2 { name="BeastJar"; version="1.10.6"; sha256="0581q9m7lb681d12vld231vn6wqv5s2sqkvav4fd0xllvjighlx7"; depends=[rJava]; }; Benchmarking = derive2 { name="Benchmarking"; version="0.29"; sha256="06zphnpnxvp6frl2gkmrsfils8xi64b4m8gvs483k8l0z4bjrfbk"; depends=[lpSolveAPI quadprog Rcpp ucminf]; }; BenfordTests = derive2 { name="BenfordTests"; version="1.2.0"; sha256="1nnj0w0zwcmg7maqmmpixx7alvsyxva370ssc26ahg6kxy5a621w"; depends=[]; }; Bergm = derive2 { name="Bergm"; version="5.0.2"; sha256="03v90hh30ydpf9i60f6fraxrlr8i3zjxq3pg1yd56122kb93aa5y"; depends=[coda ergm Matrix matrixcalc MCMCpack mvtnorm network statnet_common]; }; Bessel = derive2 { name="Bessel"; version="0.6-0"; sha256="0iwm08nhlivi4zwcqdi296a1l4n4lfanfxhaysh9vcsyk1kpiacf"; depends=[Rmpfr]; }; - Bestie = derive2 { name="Bestie"; version="0.1.1"; sha256="1vd139nl8dh707nvq35hylcng1hs8zycvjksnzxmwar1db9kgr7p"; depends=[BiDAG Rcpp]; }; + Bestie = derive2 { name="Bestie"; version="0.1.2"; sha256="0fyr0lcdqrsfj821dpbg2nqq6v9kw5xpyggx8p9dwn8bz04l7bza"; depends=[BiDAG Rcpp]; }; BetaBit = derive2 { name="BetaBit"; version="1.4"; sha256="11cvl9m20ycc0zsxbdapjflgsiaxx4dzaygjhv948adjfi5fycbn"; depends=[digest]; }; BetaPASS = derive2 { name="BetaPASS"; version="1.1-1"; sha256="17q1bfmijv38zyaj5fxlylf5zmkqry4ca9wm5km6zpksgsg2kjjq"; depends=[betareg ggplot2 pbapply]; }; - BeviMed = derive2 { name="BeviMed"; version="5.7"; sha256="1fjxin14x9i44wq6ad2i70k6sdfzy7zxyq1pibnmsyk4a0k2cfv1"; depends=[Rcpp]; }; + BeviMed = derive2 { name="BeviMed"; version="5.8"; sha256="12ngw3b05mqsf95svvkk5s8w0fs1yfbpbfk8x9a9v2yva5n65y7a"; depends=[Matrix Rcpp]; }; BeyondBenford = derive2 { name="BeyondBenford"; version="1.4"; sha256="04jdx35955g44v2is6zxfw1gip7zh3li8divc7iy5hl0jrshfhv3"; depends=[ggplot2]; }; Bhat = derive2 { name="Bhat"; version="0.9-10"; sha256="1vg4pzrk3y0dk1kbf80mxsbz9ammkysh6bn26maiplmjagbj954v"; depends=[]; }; BiBitR = derive2 { name="BiBitR"; version="0.3.1"; sha256="0wfwph6nw12hb43j14i9ycj8m2zn0m5ynp7afq9cray8rbgvxfv6"; depends=[biclust cluster dendextend foreign lattice randomcoloR viridis]; }; - BiDAG = derive2 { name="BiDAG"; version="1.4.1"; sha256="079syby4adn2ka7p5dcbxay1sh6fb5879g969jrfqwzxn4napjm4"; depends=[graph pcalg Rcpp Rgraphviz]; }; + BiDAG = derive2 { name="BiDAG"; version="2.0.2"; sha256="1sp8rzmpb6bi2zbpclxlyqgcj6na3ms8pkssrd8yx04cj9q74760"; depends=[graph pcalg Rcpp Rgraphviz]; }; BiDimRegression = derive2 { name="BiDimRegression"; version="2.0.0"; sha256="0k0708z6xn04zjkc4sk15649wji6hl5q4rvd28sz5kbq7z54j1j5"; depends=[Formula]; }; BiProbitPartial = derive2 { name="BiProbitPartial"; version="1.0.3"; sha256="0y19b8bkwr7rpygmj03013slmfbyd7aj6714hm14w5rdbnckymw3"; depends=[coda Formula mvtnorm numDeriv optimr pbivnorm Rcpp RcppArmadillo RcppTN]; }; BiSEp = derive2 { name="BiSEp"; version="2.2"; sha256="1ha7rc1q54dr2xl4bpkiwl703igmmi9qphsgv2h0flq7iz0gr351"; depends=[AnnotationDbi GOSemSim mclust]; }; BiTrinA = derive2 { name="BiTrinA"; version="1.3"; sha256="0sjq5a21vpsjs0ad0v8gsqlbk3n8virg1hzj0nvgm3h3xqhymh1d"; depends=[diptest]; }; - BiasCorrector = derive2 { name="BiasCorrector"; version="0.1.2"; sha256="1aa7h3l8rnwdkgbx000idkin671fqz8461fnqzdx9qcc2v1zbnv2"; depends=[data_table DT magrittr rBiasCorrection shiny shinydashboard shinyjs]; }; + BiasCorrector = derive2 { name="BiasCorrector"; version="0.1.4"; sha256="0c5hq2xdw25hvynarc7qlpdbjg5c5avczifnc9q9wp0ql6dr91y6"; depends=[data_table DT magrittr rBiasCorrection shiny shinydashboard shinyjs]; }; BiasedUrn = derive2 { name="BiasedUrn"; version="1.07"; sha256="13i2lgfnjhlbbm2yxfc2l5hswqw6x03pwba5csjmirv8kpjw4xr3"; depends=[]; }; BibPlots = derive2 { name="BibPlots"; version="0.0.6"; sha256="0gbywbxhqw226mzhxlkl98yky206f9m81wcrp6r4wj8wqhzc2fay"; depends=[]; }; - BigQuic = derive2 { name="BigQuic"; version="1.1-9"; sha256="09fpqs5b733gq2kb7yj8a8snhr6zqg0mqa04p7fm6z2vas9cl3ri"; depends=[Matrix Rcpp scalreg]; }; + BigQuic = derive2 { name="BigQuic"; version="1.1-9.1"; sha256="0b1vi06zakxcw045h6dnx6sy1fxzsmh69zh0m34vwr0rd18rrj5j"; depends=[Matrix Rcpp scalreg]; }; BigTSP = derive2 { name="BigTSP"; version="1.0"; sha256="1jdpa8rcnrhzn0hilb422pdxprdljrzpgr4f26668c1vv0kd6k4v"; depends=[gbm glmnet randomForest tree]; }; BigVAR = derive2 { name="BigVAR"; version="1.0.6"; sha256="03d5a61clkngq67mkf2pyjj3k633kxp7g37myfplbxi55bdfmdlz"; depends=[lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; BimodalIndex = derive2 { name="BimodalIndex"; version="1.1.9"; sha256="1m1dcj0ryjicaqjlkch7aymsklmvjvn2dvnbssi1cpi54bzn8l7g"; depends=[mclust oompaBase]; }; BinGSD = derive2 { name="BinGSD"; version="0.0.1"; sha256="0ygr5na7s82xa6vv9f3j6ns5sfhdacyykl1fg422lpkwbss39dnn"; depends=[mvtnorm]; }; BinMat = derive2 { name="BinMat"; version="0.1.2"; sha256="17f5aaz8csfs1x1x7dxvbi4g97cp75kz7ikijsyk4pgpalld58a4"; depends=[magrittr MASS pvclust]; }; - BinNonNor = derive2 { name="BinNonNor"; version="1.5.2"; sha256="13zgj4n4jhrmjv1wldvamg6dpd6qpn3nwflvf5qhhbd3r0h0jf9x"; depends=[BB corpcor Matrix mvtnorm]; }; - BinNor = derive2 { name="BinNor"; version="2.3.2"; sha256="1332lffb57si2vay4hcw6zj2mm0pzp3d9cd11vfszgnp17x8b5ss"; depends=[corpcor Matrix mvtnorm psych]; }; - BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.5.1"; sha256="1rvzgh0ly349606aw6w4g32c1csy221qizf4wmfzbv19ppixpffy"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; }; + BinNonNor = derive2 { name="BinNonNor"; version="1.5.3"; sha256="0ijjv2w4bx0i3mks7s4vii21hc9iq69p3jld1qg68a6115njsm24"; depends=[BB corpcor Matrix mvtnorm]; }; + BinNor = derive2 { name="BinNor"; version="2.3.3"; sha256="07r7nf4ygilp470z93x9dc5zddc96m2dkw6d2s4an8fbr4pljc1y"; depends=[corpcor Matrix mvtnorm psych]; }; + BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.5.2"; sha256="17981jfjjgsfzjwbv9cjgqdha846rf03nfd8kgj4wiljgz855mz9"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; }; BinQuasi = derive2 { name="BinQuasi"; version="0.1-6"; sha256="0jf7zf3yqr2kgcm6h35234x2dqf65d2dzsh63b4q8m5l36r77k59"; depends=[BiocGenerics csaw edgeR GenomicAlignments GenomicRanges IRanges mgcv pracma quadprog RMySQL Rsamtools S4Vectors SummarizedExperiment]; }; BinSegBstrap = derive2 { name="BinSegBstrap"; version="1.0"; sha256="0iia9sbpnqp07h591d7ifvxq74nvnv0xspka2479qy7il9p65d3r"; depends=[Rcpp]; }; Binarize = derive2 { name="Binarize"; version="1.3"; sha256="0xmgxlfyvgkv7xpngy9am6ihzwbjbfgp7psfnyhb1v0kj9iy7ids"; depends=[diptest]; }; @@ -490,30 +499,30 @@ in with self; { BinarybalancedCut = derive2 { name="BinarybalancedCut"; version="0.2"; sha256="1rs7x7ggqzaz9r2912g0fi9x7przd8gjy6pianx457w5f39fqx4v"; depends=[ggplot2 reshape2]; }; BioCircos = derive2 { name="BioCircos"; version="0.3.4"; sha256="1gl57r47p5z1wzs94xzc26j2r8z5hpqr4163b01x6jwzvbrlfwhz"; depends=[htmlwidgets jsonlite plyr RColorBrewer]; }; BioFTF = derive2 { name="BioFTF"; version="1.2-0"; sha256="03r6fhpc4dqrcnbl73j9kav1l7rblgfldpbkl2p367vv20xggqih"; depends=[]; }; - BioInsight = derive2 { name="BioInsight"; version="0.1.0"; sha256="0wm39l9q3dafhkwwcrv5qjlr193gnmzcg4z9fnr6dvmy6gl6xc70"; depends=[edgeR knitr limma RColorBrewer wordcloud]; }; - BioInstaller = derive2 { name="BioInstaller"; version="0.3.7"; sha256="0xbxv2ln39z70javxbx5rf77yf9zyjif3ppnr3id7cmy24hhqcab"; depends=[configr devtools futile_logger git2r jsonlite liteq R_utils RCurl rvest shiny stringi stringr]; }; + BioInsight = derive2 { name="BioInsight"; version="0.2.0"; sha256="1k64k3vv88i0x38h3lwjjiq9zzq64kw2vcxa3wr4g7l2m5hdiyk1"; depends=[edgeR knitr limma RColorBrewer wordcloud]; }; BioMark = derive2 { name="BioMark"; version="0.4.5"; sha256="1ifc72bayy3azbilajqqzl0is6z7l1zaadchcg3n8lhmjrv5sk3m"; depends=[glmnet MASS pls st]; }; BioMedR = derive2 { name="BioMedR"; version="1.2.1"; sha256="0l3nmnqv0gzkbby4fhajbba910zpnbyckvxwds353pn54g9pcry7"; depends=[Biostrings ChemmineR fmcsR GOSemSim MASS org_Hs_eg_db pls randomForest rcdk RCurl rjson]; }; BioPET = derive2 { name="BioPET"; version="0.2.2"; sha256="0zgq7i37d0rnjhlkcrl44x62vhz0njsv2fldm64j9r4wc02z1q9n"; depends=[ggplot2 gridExtra pROC VGAM]; }; BioPETsurv = derive2 { name="BioPETsurv"; version="0.1.0"; sha256="0svwf8pzvlmlp8aacf70hzlg2h81m6lyhh4p73ixqw5v9bnyq6m0"; depends=[ggplot2 gridExtra survival]; }; BioProbability = derive2 { name="BioProbability"; version="1.0"; sha256="051m761zf079s0p4q0ambwqc22qjz2yajxrsmnjnxvqiaadaj1q7"; depends=[]; }; - BioStatR = derive2 { name="BioStatR"; version="3.0.0"; sha256="1fv37xckhpn0b744r71q7h57pr5j2y0v8hcc97cgzdsqd8p4axmk"; depends=[ggplot2]; }; - BioVenn = derive2 { name="BioVenn"; version="1.1.0"; sha256="0y3drysz6s535yd0wkrinfpkm7kxkh9h6gk64cs0ln81sad4ifcx"; depends=[biomaRt plotrix svglite]; }; - BiocManager = derive2 { name="BiocManager"; version="1.30.10"; sha256="03n9s2vf7vgpgb5alpxwamf9xfkn32cbzngwyn6spq1bnh9a9dzk"; depends=[]; }; + BioStatR = derive2 { name="BioStatR"; version="3.1.2"; sha256="1fs5hzsb770ygcysmwl8dyfkrq3nwhsfw4jd73gbdw3x8dqxc6c4"; depends=[ggplot2]; }; + BioVenn = derive2 { name="BioVenn"; version="1.1.2"; sha256="1z3w53v3s9lc4n1p2z6c5vyd0h1817q7wiz7xhzj2sm2z4n17nbl"; depends=[biomaRt plotrix svglite]; }; + BiocManager = derive2 { name="BiocManager"; version="1.30.12"; sha256="0c2anza01pc36manj3cvycbq8p57qpq18dsimk3y3gpks70hhqf3"; depends=[]; }; Biocomb = derive2 { name="Biocomb"; version="0.4"; sha256="0jqfac81r5731m0i9jq7v5ns9263p8r7i03jyz10y915kfr6ikh6"; depends=[arules class e1071 FSelector gtools MASS nnet pamr pROC randomForest Rcpp rgl ROCR rpart RWeka]; }; - Biodem = derive2 { name="Biodem"; version="0.4"; sha256="0k0p4s21089wg3r3pvyy9cxsdf4ijdl598gmxynbzvwpr670qnsh"; depends=[]; }; - BiodiversityR = derive2 { name="BiodiversityR"; version="2.12-3"; sha256="1f3r156m53j823vwnyqfmsqd0z0gyhdili7f91y3d4p9x3d4ggw8"; depends=[Rcmdr vegan]; }; + Biodem = derive2 { name="Biodem"; version="0.5"; sha256="1phnq6zq96i6z7jj196png3spjpbbx5p2s8iya0vvbfik12ivzkc"; depends=[]; }; + BiodiversityR = derive2 { name="BiodiversityR"; version="2.13-1"; sha256="0x9z9v79mxzqsvi6v93ffm440fkbfqb1x6wd8csy6zwrg5xyj8cb"; depends=[Rcmdr vegan]; }; Bioi = derive2 { name="Bioi"; version="0.2.10"; sha256="1ay8889490nfhxhh72fvk9z4h58xknm2b145xhbx2wbzj65zf9ib"; depends=[assertthat dplyr igraph Rcpp]; }; - Biolinv = derive2 { name="Biolinv"; version="0.1-2"; sha256="0g9vw1jcsjawmddkixssm5gbncy17fdd6a3c5b2qd4hx81kxz8q9"; depends=[classInt fields raster sp spatstat]; }; + Biolinv = derive2 { name="Biolinv"; version="0.1-3"; sha256="1c081rhbgl6n76p2knaiyvjx0l02slix92vgfl2spss5cb9qzkln"; depends=[classInt fields raster sp spatstat spatstat_core spatstat_geom]; }; Biopeak = derive2 { name="Biopeak"; version="1.0"; sha256="1l08m1jl8yygbdfzk8klpj1q2m7icvxi98vmk7akxs0sswjc6wd2"; depends=[cluster dbscan factoextra gplots RColorBrewer]; }; Bios2cor = derive2 { name="Bios2cor"; version="2.2"; sha256="1wkj9vr33m9jilidil9jpw5rzr3pf7gkimxdvch22ks4bgkx7l1w"; depends=[bigmemory bio3d circular igraph]; }; + Biostatistics = derive2 { name="Biostatistics"; version="1.0.1"; sha256="1kixhwbnl9y94zas7zfzilkgryn4b3w59cvkf1zy7v68lfjfwvvs"; depends=[learnr]; }; Biotech = derive2 { name="Biotech"; version="1.0.0"; sha256="01ddpxlgav8jjns0r23yjjynv80gwqcfalnz8gr553lm0wffdvj5"; depends=[dr4pl ggplot2 magrittr tidyverse]; }; BisRNA = derive2 { name="BisRNA"; version="0.2.2"; sha256="11jl5109nlm272vncprwplkz4kpvg7yx6yfnbjg47lfrsxcj8n0g"; depends=[MASS]; }; BisqueRNA = derive2 { name="BisqueRNA"; version="1.0.4"; sha256="01g34n87ml7n3pck77497ddgbv3rr5p4153ac8ninpgjijlm3jw2"; depends=[Biobase limSolve]; }; BivGeo = derive2 { name="BivGeo"; version="2.0.1"; sha256="1sj52v1zmk425jw9acq9y0jdp3agx103yzf1bjbc5vrmk1x0i0qr"; depends=[]; }; BivRec = derive2 { name="BivRec"; version="1.2.0"; sha256="1q68qs2xm3qry7wc5ilrgjpyygfbcvvqy61yg98h5px302d1ixk3"; depends=[dplyr MASS Rcpp stringr survival]; }; BivRegBLS = derive2 { name="BivRegBLS"; version="1.1.1"; sha256="1kpl0pwm2g40pxrfbz2d95vcrm51flg6bgc83661349cmc9a2511"; depends=[ellipse]; }; - BivUnifBin = derive2 { name="BivUnifBin"; version="1.3.2"; sha256="14v00fycxwnnm4x4hckckqb90j5m8hsbkr65z2zln459l6rsdwx9"; depends=[BinOrdNonNor rootSolve]; }; + BivUnifBin = derive2 { name="BivUnifBin"; version="1.3.3"; sha256="0l5s07mvip1k667rvdpkh3k6xkzns8cy50bcs2xlmxd9xp7c6j2w"; depends=[BinOrdNonNor rootSolve]; }; BivarP = derive2 { name="BivarP"; version="1.0"; sha256="08f7sphylaj3kximy1avaf29hxj2n800adsnssh01p9bcxnzb2i4"; depends=[copula dfoptim survival]; }; Bivariate_Pareto = derive2 { name="Bivariate.Pareto"; version="1.0.3"; sha256="11knwynqfxdz6zl7vzr48jpygcilsxarpmwphaajh62asdlg5w6p"; depends=[compound_Cox]; }; BlackCarbon = derive2 { name="BlackCarbon"; version="0.1.0"; sha256="19ll2lcdxj5bmgh4wyk47ddxpwrqdiy67wsvj7mi1vm7y5ccyfhn"; depends=[]; }; @@ -522,7 +531,7 @@ in with self; { Blaunet = derive2 { name="Blaunet"; version="2.1.0"; sha256="0rbqbi57f4qkdd8b2zbw1i8afb6355ba4yv0zg6f410qqgxiq0c4"; depends=[cairoDevice ergm foreign haven network plot3D plot3Drgl rgl RGtk2 sna statnet_common]; }; Blendstat = derive2 { name="Blendstat"; version="1.0.3"; sha256="0d5zzqiav7b5prh8332kwqy6ga96lkbkdjis8qwifa11j5qa087a"; depends=[lattice MASS]; }; BlockCov = derive2 { name="BlockCov"; version="0.1.1"; sha256="1ilqd8kvhlq0nc1n4y7g0aiwran3kyqs8i143j6dv2wy3myn5x0l"; depends=[BBmisc dplyr magrittr Matrix Rdpack rlang tibble]; }; - BlockFeST = derive2 { name="BlockFeST"; version="1.8"; sha256="12cbrmgqszlj729zrn9d1d7drbr0iay43knnmrzcxs6v7lfszsx5"; depends=[BASIX]; }; + BlockFeST = derive2 { name="BlockFeST"; version="2.0"; sha256="1fcl3yc1cf09znqbj787d3fd2kl5rp63la7pxawsgmap7nxwkp65"; depends=[BASIX]; }; BlockMessage = derive2 { name="BlockMessage"; version="1.0"; sha256="1jrcb9j1ikbpw098gqbcj29yhffa15xav90y6vpginmhbfpwlbf4"; depends=[]; }; BlythStillCasellaCI = derive2 { name="BlythStillCasellaCI"; version="1.0.0"; sha256="0xgrrh6rf732c2dh1z1qyvkqw8ga1yl6i802r399bb7k55g6z6d0"; depends=[]; }; Bmix = derive2 { name="Bmix"; version="0.6"; sha256="17swhn2p7jv29fkspacg2v181lkc9yd3xww2fx31xs8hsndcm857"; depends=[mvtnorm]; }; @@ -535,17 +544,18 @@ in with self; { BondValuation = derive2 { name="BondValuation"; version="0.1.0"; sha256="1sgnf5a6rm1br6i82bmp7s044012bwfxa9yb6bjkq8kr83mf7i6v"; depends=[Rcpp timeDate]; }; BoolFilter = derive2 { name="BoolFilter"; version="1.0.0"; sha256="14z4fzf8p4wgi939qs6v39a3xizccjcx7j4szsydllpkvxbwggbw"; depends=[BoolNet Rlab]; }; BoolNet = derive2 { name="BoolNet"; version="2.1.5"; sha256="11fysc39vfk3zb9qklryi8gl42c3hqgzlvci4jj0zkqnm0v9amqk"; depends=[igraph XML]; }; - Boom = derive2 { name="Boom"; version="0.9.6"; sha256="0qzjj4dikphhpwcf1lkrf574bdf9j7c1xjpl8lpg4nqjjqd0hbwg"; depends=[MASS]; }; - BoomSpikeSlab = derive2 { name="BoomSpikeSlab"; version="1.2.3"; sha256="0ib9i5y1a5r1q1iy1vms95lh7f1naqn737nvhrg8na7isxp6jgir"; depends=[Boom]; }; - BoostMLR = derive2 { name="BoostMLR"; version="1.0.2"; sha256="1iy8v9jc13wncz6z3rqlbxkf9lclq0qynp4m54b5xl35qz9xq676"; depends=[nlme Rcpp RcppArmadillo]; }; + Boom = derive2 { name="Boom"; version="0.9.7"; sha256="0zw5i6xigpg8jnk4k2w8iqnxlbgk8zzd5dmfmi5wjc153vgssk12"; depends=[MASS]; }; + BoomSpikeSlab = derive2 { name="BoomSpikeSlab"; version="1.2.4"; sha256="01mj2wjff7gs7kb3g8n7i288rh8zzp7qfq6413p13vzlpbryw0g6"; depends=[Boom]; }; + BoostMLR = derive2 { name="BoostMLR"; version="1.0.3"; sha256="0gk8jf04qda1qsc6987d8nfa453v9cqkjsvvrrg68yx3fd96m8aj"; depends=[nlme Rcpp RcppArmadillo]; }; BootMRMR = derive2 { name="BootMRMR"; version="0.1"; sha256="07am80603pv1dh5ma3zb0idnslkzm5m3ym8sd1nhkh8zbc6qqmzs"; depends=[]; }; BootPR = derive2 { name="BootPR"; version="0.60"; sha256="03zw7hz4gyhp6iq3sb03pc5k2fhvrpkspzi22zks25s1l7mq51bi"; depends=[]; }; BootstrapQTL = derive2 { name="BootstrapQTL"; version="1.0.2"; sha256="1qf93wmrh6znm81jr3gyn1sl8x4i6pdx811r70fg8k026fbfjn3a"; depends=[data_table foreach MatrixEQTL]; }; Boptbd = derive2 { name="Boptbd"; version="1.0.5"; sha256="1p786avc37yq5g01zh6sqx7b1rvbxrh6gbxsad4bdvr12cjdsss6"; depends=[igraph MASS Matrix]; }; Boruta = derive2 { name="Boruta"; version="7.0.0"; sha256="0y2w4wb45kfnzrxcrdsiwgal9fsnlr3wad1sqdc70qv8gp921xbg"; depends=[ranger]; }; - BoutrosLab_plotting_general = derive2 { name="BoutrosLab.plotting.general"; version="6.0.1"; sha256="0wg81bg1bm9llir17v4xmsai3jgx3f10fqphwk450w4zr889fhy5"; depends=[cluster e1071 gridExtra gtable hexbin lattice latticeExtra MASS]; }; + BoutrosLab_plotting_general = derive2 { name="BoutrosLab.plotting.general"; version="6.0.3"; sha256="0sirpdp7k28wwn5k5wyc0ib6abb5b1qpjrrk3m168x5yg1s2hqkf"; depends=[cluster e1071 gridExtra gtable hexbin lattice latticeExtra MASS]; }; BradleyTerry2 = derive2 { name="BradleyTerry2"; version="1.1-2"; sha256="0vss3ib74cz2zn1afmrvllawghj9z2ay4x1ysvk4rqvjmiia4a2i"; depends=[brglm gtools lme4 qvcalc]; }; Branching = derive2 { name="Branching"; version="0.9.4"; sha256="1c209gdasm7qipv2gg4d1hr0jmhnzz5rddgjxb7xacazc0c2mhff"; depends=[]; }; + BrazilMet = derive2 { name="BrazilMet"; version="0.1.0"; sha256="0yrc0ha7ysmad7l0kwylgmmd0b5zy86dsba4lrj8qa294lgxl5fa"; depends=[dplyr readxl stringr tidyr]; }; BreakPoints = derive2 { name="BreakPoints"; version="1.2"; sha256="125fvzkmfnriyd4y4nywj5ihm766xlsyi7dpnq57fa9d38ffbyf2"; depends=[MASS zoo]; }; Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-6"; sha256="1m3ajvcksqfck5l5hj5xiflj4ry6d896ybv4f0xxks8chgnwmv0r"; depends=[]; }; BrownDog = derive2 { name="BrownDog"; version="0.2.1"; sha256="0wnf1jcf4cakbvj9j1l7jk9mq7gd4j1il1ha2vglghqn04f27938"; depends=[httpuv jsonlite RCurl]; }; @@ -553,13 +563,14 @@ in with self; { Brundle = derive2 { name="Brundle"; version="1.0.9"; sha256="0z17wgmi272738n8pn6r60v5gbg8cbmwhc94s8f3vipa44h690bc"; depends=[DESeq2 DiffBind lattice Rsamtools]; }; BsMD = derive2 { name="BsMD"; version="2020.4.30"; sha256="1842a4hq7pa3bxw18hnw8fva0x3jzi27rkrib92idsc92n0r44n2"; depends=[]; }; Buddle = derive2 { name="Buddle"; version="2.0.1"; sha256="0hi516cbl93z00jpdgyp3j5hz0xf594vn65p6ahpffwzh1l8s1cf"; depends=[plyr Rcpp RcppArmadillo]; }; + BuildSys = derive2 { name="BuildSys"; version="1.0.9"; sha256="1jm8kdphzngxgaiycnw72h4jlwm8ibmbbrvyqmma6314j4cylr5x"; depends=[digest]; }; BullsEyeR = derive2 { name="BullsEyeR"; version="0.2.0"; sha256="1p8b5w818zi7zs0n13cc3sw8z0z9mfr5cn5y5icsx1jam5amppci"; depends=[Matrix NLP slam tm topicmodels]; }; BurStFin = derive2 { name="BurStFin"; version="1.02"; sha256="16w2s0bg73swdps9r0i8lwvf1najiqyx7w7f91xrsfhmnqkkjzka"; depends=[]; }; BurStMisc = derive2 { name="BurStMisc"; version="1.1"; sha256="0cyi42zkn2dby162x9f95b3hpqxbzx25s7nahb4p86r60xj3a5c0"; depends=[]; }; BusinessDuration = derive2 { name="BusinessDuration"; version="0.2.0"; sha256="17923n1r3n8kp7qqzr2dv8ffax355yyc3b9f6mv2hxy6k31hrrb8"; depends=[chron]; }; - BuyseTest = derive2 { name="BuyseTest"; version="2.1.3"; sha256="1yp7w78ic9phcdfp82finv0vgf4zgqsykdajxdcy0nv022l8vr7q"; depends=[data_table doParallel foreach lava prodlim Rcpp RcppArmadillo]; }; + BuyseTest = derive2 { name="BuyseTest"; version="2.3.0"; sha256="1vawklcxjp7apcq3k29skj2lqx8dwpl46a3rzglxpjm2scx3wy7c"; depends=[data_table doParallel foreach ggplot2 lava prodlim Rcpp RcppArmadillo]; }; Bvalue = derive2 { name="Bvalue"; version="1.0"; sha256="17zlllzjrcq4grggal3hlg384990n62wnflr2g21fa6hcnglwy7d"; depends=[]; }; - C443 = derive2 { name="C443"; version="3.0.0"; sha256="1wfj5avyrqf60g0vdfk6dmrs7dzp3zq22g9j9j9j78hcykbnjdj4"; depends=[cluster ggplot2 gridExtra igraph MASS partykit plyr qgraph RColorBrewer reshape2 rpart]; }; + C443 = derive2 { name="C443"; version="3.1.0"; sha256="1zaz9709z354c2z0cd7p4d3cq1zsxx6lhy3qq23b0jc3ilfwlkhh"; depends=[cluster ggplot2 gridExtra igraph MASS partykit plyr qgraph RColorBrewer reshape2 rpart]; }; C50 = derive2 { name="C50"; version="0.1.3.1"; sha256="0ikm0awb6v5iignr1izmcaw6l32gyn3rsinq58panl7gvsl1n58b"; depends=[Cubist partykit]; }; CA3variants = derive2 { name="CA3variants"; version="3.0"; sha256="0n0a4rxaskz94kibcycrsg46w8r515r4pzadvlv6b43qpgwrqh92"; depends=[checkmate ggforce ggplot2 ggrepel gridExtra multichull plotly]; }; CADFtest = derive2 { name="CADFtest"; version="0.3-3"; sha256="06bwv728ckalzibxginzfica24w18m4g87i0i064m3q89ghmnlqm"; depends=[dynlm sandwich tseries urca]; }; @@ -568,40 +579,43 @@ in with self; { CALF = derive2 { name="CALF"; version="1.0.15"; sha256="0rxdfd23kkyhwz2qc9zilvrvr24xlgd5phkh0164b0x0d96iffmz"; depends=[data_table ggplot2]; }; CAMAN = derive2 { name="CAMAN"; version="0.74"; sha256="0d932fbqzlxlhn7m8zfx7wr02pc7fm8398rym1jh2cdy2fk5im08"; depends=[mvtnorm sp]; }; CANSIM2R = derive2 { name="CANSIM2R"; version="1.14.1"; sha256="1dnzbd9lyqj3w80lx12qxcsbmv8wy6hxknyi5ijp99cfv7kaq1kc"; depends=[downloader Hmisc reshape2]; }; - CARBayes = derive2 { name="CARBayes"; version="5.2"; sha256="08ajcgc0ycngcl2d757yjz1mpki88aq2jp07nr64j8aqpych5lw2"; depends=[CARBayesdata coda dplyr GGally leaflet MASS matrixcalc MCMCpack Rcpp rgdal sp spam spdep truncnorm]; }; - CARBayesST = derive2 { name="CARBayesST"; version="3.1"; sha256="12l4jdbaadnyngqphzc8fsspynryci9p9h6bl1196arqd5igax94"; depends=[CARBayesdata coda dplyr GGally ggplot2 gridExtra gtools leaflet MASS matrixcalc matrixStats Rcpp rgdal sp spam spdep testthat truncdist truncnorm]; }; + CARBayes = derive2 { name="CARBayes"; version="5.2.3"; sha256="0aggjs0718s8a0287x5dbwr01jbr08mzki93a5lxj20z3a69lvz2"; depends=[CARBayesdata coda dplyr GGally leaflet MASS matrixcalc MCMCpack Rcpp rgdal sp spam spdep truncnorm]; }; + CARBayesST = derive2 { name="CARBayesST"; version="3.2"; sha256="10cqzj8b0krkha747mhdsfcdpaf6g8bzrb2yz3q42s47szq6x8q1"; depends=[CARBayesdata coda dplyr GGally ggplot2 gridExtra gtools leaflet MASS matrixcalc matrixStats MCMCpack Rcpp rgdal sp spam spdep testthat truncdist truncnorm]; }; CARBayesdata = derive2 { name="CARBayesdata"; version="2.2"; sha256="06pkhmlkp4hl7c6bgarhab6z640h1xvgw86q1ihipbc432an4gvl"; depends=[shapefiles sp]; }; CARE1 = derive2 { name="CARE1"; version="1.1.0"; sha256="1zwl4zv60mrzlzfgd7n37jjlr0j918a8ji36n94s5xw8wwipiznw"; depends=[]; }; CARLIT = derive2 { name="CARLIT"; version="1.0"; sha256="04kpjfps4ydf8fj75isqp16g1asdsyf8nszhbfkpw1zxkrmiksyp"; depends=[]; }; CARRoT = derive2 { name="CARRoT"; version="2.5.1"; sha256="0z5vrsyzfiv1nzggqmrgybfyjg0wdcdag4xjg0f70p5x91fg1cqk"; depends=[doParallel foreach nnet Rdpack]; }; CARS = derive2 { name="CARS"; version="0.2.2"; sha256="18l2bhfwma24q1zg1y1xmlcmnbzjqmmny3h7s179kslagnh3kmsj"; depends=[np]; }; CASMAP = derive2 { name="CASMAP"; version="0.6.1"; sha256="1447d4gflan2093fb68inb2ysx5svb9vhnjc7lnkgpjsiam4p8yy"; depends=[Rcpp]; }; - CAST = derive2 { name="CAST"; version="0.4.2"; sha256="0dn5lnviyyhhn8mjd2n43gbkh89v49x3x0r3m8zw8f9hga7rpzb4"; depends=[caret FNN ggplot2 plyr reshape]; }; + CAST = derive2 { name="CAST"; version="0.5.1"; sha256="0ph71nwp6zibmgy324aqqcwx2p2m75560q2nglm6rg8bww9wib6x"; depends=[caret data_table FNN ggplot2 lattice plyr reshape zoo]; }; CATT = derive2 { name="CATT"; version="2.0"; sha256="12xdspl1gbf51snyrl44nn7alfyccdfihibkgvzr66lrby8b8fhg"; depends=[]; }; CATTexact = derive2 { name="CATTexact"; version="0.1.1"; sha256="07ciln6cfvqya7dwwn6mhd9lk2833hypm4badizgfi2k749d1p00"; depends=[]; }; CATkit = derive2 { name="CATkit"; version="3.3.3"; sha256="01q2ssyg0jcjgahaslfgpakjsv2wil654lc6xrg5xbbrkx7ccb90"; depends=[assertr CombMSC Hmisc magic MASS png rtf season signal]; }; CAinterprTools = derive2 { name="CAinterprTools"; version="1.1.0"; sha256="07rvi91ysqyfwagmip0cnqjahv1n8slicd5hznqf5v3l841xh7p7"; depends=[ca classInt cluster FactoMineR ggplot2 ggrepel Hmisc RcmdrMisc reshape2]; }; - CAvariants = derive2 { name="CAvariants"; version="5.5"; sha256="0bxifvhpjay18k6gkppypc1d0zaln1zhnxabvvld0pz4h59s2hlv"; depends=[ggforce ggplot2 ggrepel gridExtra plotly]; }; + CAvariants = derive2 { name="CAvariants"; version="5.6"; sha256="1rv3r27m43q8z9hiac5fj3kx77j0sfmcgxwcl6mdfgx0jwq7pi3s"; depends=[ggforce ggplot2 ggrepel gridExtra plotly]; }; CB2 = derive2 { name="CB2"; version="1.3.4"; sha256="0431bd956hmkrhs9x845vjwbzzwzd7n9nfx9y95mv6qv84zd4wv2"; depends=[dplyr ggplot2 glue magrittr metap pheatmap R_utils Rcpp RcppArmadillo readr stringr tibble tidyr]; }; - CBCgrps = derive2 { name="CBCgrps"; version="2.8.1"; sha256="1dqzn7ip49y5q863bzw5i086nl3ck2cfsvyw86k8dhcbs785pr56"; depends=[nortest]; }; + CBCgrps = derive2 { name="CBCgrps"; version="2.8.2"; sha256="0z34vcdq5lp1l15l3a67lpvfla0g0qsb5ijbc9h575h7fpf28jqf"; depends=[nortest]; }; CBDA = derive2 { name="CBDA"; version="1.0.0"; sha256="0qm77vvqjgi83i8izly995ziv9ski8kgzqyq4g81i2k7a5dp8vxv"; depends=[doParallel foreach prettydoc SuperLearner]; }; - CBPS = derive2 { name="CBPS"; version="0.21"; sha256="0av9lgdn9z57xl9cp53pi9nq971a6fj4przczw7sdb5saml3yr30"; depends=[glmnet MASS MatchIt nnet numDeriv]; }; - CBSr = derive2 { name="CBSr"; version="1.0.3"; sha256="0lfs8p9nha1aq6dn6sd3pc9x0931zawxprpflfv9gqb8w7n1z4sd"; depends=[NlcOptim rJava]; }; + CBPS = derive2 { name="CBPS"; version="0.22"; sha256="1vws60xfn8hnh9hsmps0wxm21rr4ms3fx8m02myp60jzfvk4g4ni"; depends=[glmnet MASS MatchIt nnet numDeriv]; }; + CBSr = derive2 { name="CBSr"; version="1.0.5"; sha256="175xx7igxpx2s9jl9ncjabqr6n05v5ipwm7shpqm19qfqxb4ygrz"; depends=[NlcOptim rJava]; }; CBT = derive2 { name="CBT"; version="1.0"; sha256="13h6sf7w03nfq2arqymwww13ywnv9xnqbqazlzn856mj3ggaqda7"; depends=[]; }; CC = derive2 { name="CC"; version="1.0"; sha256="189si37ggichqmzy8m686zw1cijix7yfy8ma5iqpnq1q9vm3pcvy"; depends=[]; }; - CCA = derive2 { name="CCA"; version="1.2"; sha256="00zy6bln22qshhlll0y0adnvb8wa1f7famqyws71b6pcnwxki5ha"; depends=[fda fields]; }; + CCA = derive2 { name="CCA"; version="1.2.1"; sha256="1l4vp8yd42rpsm40szjfzhvbb5c7kl7yf4346i0940s6gk7bzzi8"; depends=[fda fields]; }; CCAMLRGIS = derive2 { name="CCAMLRGIS"; version="3.0.6"; sha256="1xcxg3k0qgsh85l60sr9mi7a1mjjrw0rim4k05piwr2binwn1s1c"; depends=[dplyr geosphere magrittr raster rgdal rgeos sp]; }; CCM = derive2 { name="CCM"; version="1.2"; sha256="1mhl7yppniybdffylddbbb65n7gmv029fb46wlsxm4yf2xkplmwy"; depends=[]; }; CCP = derive2 { name="CCP"; version="1.1"; sha256="07jxh33pb8llk1gx4rc80ppi35z8y1gwsf19zrca9w91aahcs8cx"; depends=[]; }; CCTpack = derive2 { name="CCTpack"; version="1.5.2"; sha256="1kkxsk9x4jz2bvldmba7fsri3zc1cjz15z0xicjmfc7lj72ngdig"; depends=[MASS mvtnorm polycor psych R2jags rjags]; }; CCpop = derive2 { name="CCpop"; version="1.0"; sha256="10kgw3b98r0kn74w89znq6skgk8b3ldil6yb0hn5rlcf6lazjzca"; depends=[nloptr]; }; - CDFt = derive2 { name="CDFt"; version="1.0.1"; sha256="0sc8ga48l3vvqfjq3ak5j1y27hgr5dw61wp0w5jpwzjz22jzqbap"; depends=[]; }; + CDFt = derive2 { name="CDFt"; version="1.2"; sha256="19axaf3bh9gasnsfamd5ych1jn751scaplgwpmsf3liazcqqpa61"; depends=[]; }; CDLasso = derive2 { name="CDLasso"; version="1.1"; sha256="0n699y18ia2yqpk78mszgggy7jz5dybwsi2y56kdyblddcmz1yv7"; depends=[]; }; CDM = derive2 { name="CDM"; version="7.5-15"; sha256="159ny2dz0rf1r3k1mqlfwambffc8rx425sggf5bn51nybpzanq3l"; depends=[mvtnorm polycor Rcpp RcppArmadillo]; }; CDNmoney = derive2 { name="CDNmoney"; version="2012.4-2"; sha256="1isbvfq0lygs75y1hn3klqms8q7g1xbkcr8fgj75h1c99d4khvm6"; depends=[]; }; CDROM = derive2 { name="CDROM"; version="1.1"; sha256="0mvhqs4m8jp39x1rk31a1sqqmfq1avcnasgh8bizlyxx62igmi1b"; depends=[]; }; + CDSeq = derive2 { name="CDSeq"; version="1.0.8"; sha256="06pjp9hn9ziz4wgkaj0r0zzw69r7635j10rmnl331abc4mchpazy"; depends=[Biobase clue dirmult doParallel dplyr foreach ggplot2 ggpubr gplots iterators magrittr MASS Matrix matrixStats qlcMatrix Rcpp RcppArmadillo RcppThread rlang Seurat]; }; CDVineCopulaConditional = derive2 { name="CDVineCopulaConditional"; version="0.1.1"; sha256="1wyy324vrwipdsq0p021bj1gdhyxg09g3dkw8wv5v6rfrrs84m9k"; depends=[combinat VineCopula]; }; + CDatanet = derive2 { name="CDatanet"; version="0.0.1"; sha256="05nh56w18bf1yk2i74ppslvd3307b6pqif7bbjcgm8q6nha2mrfq"; depends=[ddpcr Formula formula_tools Matrix Rcpp RcppArmadillo RcppProgress]; }; CEC = derive2 { name="CEC"; version="0.10.2"; sha256="03fxhqlpn7x3djfanlix3yzf1cy6zf854g70gq2d93ix9gis7knv"; depends=[]; }; + CEDARS = derive2 { name="CEDARS"; version="1.90"; sha256="1fngyc08kvilfd2d75gjg0s6c5zvjywym35sk568yzxnsz89b7yy"; depends=[fastmatch jsonlite mongolite readr shiny udpipe]; }; CEGO = derive2 { name="CEGO"; version="2.4.0"; sha256="1rmx9ppiw7k5cznanz3m4lnhriz3fs4f7wk5h3q9wg9cyzfjhh38"; depends=[DEoptim fastmatch MASS Matrix ParamHelpers quadprog]; }; CENFA = derive2 { name="CENFA"; version="1.1.0"; sha256="03l0i24m2mh0gfmg7b48qg15zmfr8a39l1nswvmbmcj2a5hxybf4"; depends=[doSNOW foreach magrittr pbapply raster Rcpp snow sp]; }; CEoptim = derive2 { name="CEoptim"; version="1.2"; sha256="0bbjrhl63cbx1rsr5gclbqhjpnjid8ynk2ygaf1chf8z381n7650"; depends=[MASS msm sna]; }; @@ -618,7 +632,8 @@ in with self; { CHFF = derive2 { name="CHFF"; version="0.1.0"; sha256="0jv75p1bnwsad2vpxf1zwq97al9xxhk2hpnpsilf0jn0w7g9b2d3"; depends=[]; }; CHMM = derive2 { name="CHMM"; version="0.1.1"; sha256="07fdvnwhblwvljbl2z0vs42nwki67yl5ly3fj40p50k3rnqqmavj"; depends=[mclust]; }; CHNCapitalStock = derive2 { name="CHNCapitalStock"; version="0.1.0"; sha256="1w8abj1rxkpql696dr6w19xsgxjmkm0jwnln7lp48fnxdsa424x8"; depends=[dplyr magrittr]; }; - CHNOSZ = derive2 { name="CHNOSZ"; version="1.4.0"; sha256="0lifanx2y2crhmfdqja26dj5agyb3qnryjhp3c1vnnp774vqabr6"; depends=[]; }; + CHNOSZ = derive2 { name="CHNOSZ"; version="1.4.1"; sha256="0q541a7gr8lg25y37qy067aik0ncay401hm7ml0sag0gwl1whi4k"; depends=[]; }; + CHOIRBM = derive2 { name="CHOIRBM"; version="0.0.2"; sha256="1ak9swfnc0i23pv6mg5bav09pb7v0afdr7h08s1pyd77wyzf95df"; depends=[ggplot2 rlang stringr]; }; CHsharp = derive2 { name="CHsharp"; version="0.4"; sha256="19mb5zzi9x4pm2z9jbha5dz4k5f1iqjv31aisyv4qh14k5ysdz2i"; depends=[KernSmooth scatterplot3d]; }; CIAAWconsensus = derive2 { name="CIAAWconsensus"; version="1.3"; sha256="0yhay4fp5lyf0sdcf807yvys17qz9cr5f5ikim25mq336p7fp03x"; depends=[Matrix mvtnorm numDeriv stringr]; }; CIEE = derive2 { name="CIEE"; version="0.1.1"; sha256="03kq9cp0v41y0r2l9j5imcrsail2xsvlzhhhsrw454d4s9gqdql9"; depends=[survival]; }; @@ -626,7 +641,7 @@ in with self; { CIM = derive2 { name="CIM"; version="1.0.0"; sha256="02l8rspiiv6vj6k0q6wpiazny3f2s4dsivsm7zb9cm90qh1rv2d7"; depends=[]; }; CIMTx = derive2 { name="CIMTx"; version="0.2.0"; sha256="1l9wnywgmljawbj2q4g93dlh4mx5zgvm7nj9dan3dvvimb1v9vl0"; depends=[arm BART car class dbarts dplyr gam magrittr Matching nnet SuperLearner tidyr tmle twang WeightIt]; }; CINID = derive2 { name="CINID"; version="1.3-0"; sha256="06n5bwjr44rx0m12xradzaca26rvh01mlimbn0gr3jfzkmyj2f1g"; depends=[]; }; - CINNA = derive2 { name="CINNA"; version="1.1.53"; sha256="0mp7fvsxiri6454s7hlpsy9r3ysy6vdb3yslnizgqi38rb17phik"; depends=[centiserve circlize corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph intergraph network pheatmap plyr qdapTools Rtsne sna viridis]; }; + CINNA = derive2 { name="CINNA"; version="1.1.54"; sha256="1fvyxgcvdi3h7cysl08n7gzs5dmv3f9rcw1ds29l8n8w9rz6j7rb"; depends=[centiserve circlize corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph intergraph network pheatmap plyr qdapTools Rtsne sna viridis]; }; CISE = derive2 { name="CISE"; version="0.1.0"; sha256="10mbi4v8dfdc9ngnrrmxpng8fnig5m8nv7799jksbcf6pnj8yv51"; depends=[far gdata glmnet MASS Matrix rARPACK]; }; CITAN = derive2 { name="CITAN"; version="2015.12-2"; sha256="08h91q7529q04izgqw3ahm4r0zjpwnwyc0vynykvv9fz2fkbk7wb"; depends=[agop DBI hash RGtk2 RSQLite stringi]; }; CIplot = derive2 { name="CIplot"; version="1.0"; sha256="0hx3dn7d8hvsh75747d9046iqriy3bjnchph8xllnvlhkrm4di1f"; depends=[MASS multcomp]; }; @@ -638,9 +653,8 @@ in with self; { CLONETv2 = derive2 { name="CLONETv2"; version="2.1.0"; sha256="15wqs4hdxyfdglfr4dkm4rndz15rbq7dxlq1zq3vfslvi1qxaxdb"; depends=[arules ggplot2 ggrepel sets]; }; CLSOCP = derive2 { name="CLSOCP"; version="1.0"; sha256="0rkwq9rl2ph4h5zwb2i3yphjyzxmh6b6k23a8gcczycx6xdq4yhw"; depends=[Matrix]; }; CLUSTShiny = derive2 { name="CLUSTShiny"; version="0.1.0"; sha256="19mh5g1ylvlab4xjxw7girxk9zkpxxczhbfijf11b592hbw0qxqk"; depends=[cluster dplyr klaR MASS psycho rmarkdown shiny]; }; - CLVTools = derive2 { name="CLVTools"; version="0.7.0"; sha256="0w15dnl9ld5fjsq9xmm7j8fpar3fgr3mz6aj7ndnsxwhpja21rn5"; depends=[data_table foreach ggplot2 lubridate MASS Matrix optimx Rcpp RcppArmadillo RcppGSL]; }; + CLVTools = derive2 { name="CLVTools"; version="0.8.0"; sha256="05gj95v61hys4vrdpb8i61wry11z1kl8jhhr7997v1fmd290sbkd"; depends=[data_table ggplot2 lubridate MASS Matrix optimx Rcpp RcppArmadillo RcppGSL]; }; CMC = derive2 { name="CMC"; version="1.0"; sha256="1r9a5k79fyw01yiwxq02327hpn4l1v2lp0958jj9217wxmhn3pr5"; depends=[]; }; - CME_assistant = derive2 { name="CME.assistant"; version="1.1.1"; sha256="1dfb1pld4bsdkmgcfmaxyxqj8dh8wjsmvm82klc45sbhbaj10s5c"; depends=[data_table ggforce ggplot2 here lubridate readr readxl scales stringr usethis xlsx]; }; CMF = derive2 { name="CMF"; version="1.0.2"; sha256="0hm6srsylg1syz86iz93qyxr7xgh1qvmp27k2hgkj1z1z8lsw1ca"; depends=[Rcpp]; }; CMLS = derive2 { name="CMLS"; version="1.0-0"; sha256="1542qqsl6sksrcpwhnn55d260hkbmy4ikd0v2an96yxk5w95spvn"; depends=[quadprog]; }; CMShiny = derive2 { name="CMShiny"; version="0.1.0"; sha256="0ciis3930yhn4dmazsg2yp7wi9hdfj5slr032x8qfllxis7m4k0w"; depends=[caret e1071 epitools Matrix rmarkdown shiny shinyMatrix]; }; @@ -652,7 +666,7 @@ in with self; { CNLTtsa = derive2 { name="CNLTtsa"; version="0.1-2"; sha256="1vy0jjg6s8yvsvkx4pin183y5bnikm5cmjcpa9znz9dj1w6hwr5r"; depends=[adlift CNLTreg fields nlt]; }; CNOGpro = derive2 { name="CNOGpro"; version="1.1"; sha256="1frsmhfqrlg1vsa06cabqmrzngq4p5gqwyb9qgnsgg81a9ybm6l8"; depends=[seqinr]; }; CNVRG = derive2 { name="CNVRG"; version="0.2"; sha256="1678bkhpyynl0vzgdf9knn4xwa3289pmiw7x383fgv3hh8jsp1mn"; depends=[BH Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders vegan]; }; - CNVScope = derive2 { name="CNVScope"; version="3.3.9"; sha256="0l2wrh314cyslyxd2fkx92ay4s5a7v23in4whs316qx5al04jbzw"; depends=[biomaRt data_table doParallel dplyr foreach GenomicInteractions ggplot2 jointseg magrittr Matrix matrixStats numbers OpenImageR plotly plyr RCurl reshape2 rtracklayer shiny stringr tidyr]; }; + CNVScope = derive2 { name="CNVScope"; version="3.5.6"; sha256="0s05h345icmd2zvd86vbjqpaz6aq9wf43gd4pwimcrpzs9k3gccv"; depends=[biomaRt data_table doParallel dplyr foreach GenomicInteractions ggplot2 jointseg magrittr Matrix matrixStats numbers OpenImageR plyr RCurl reshape2 rtracklayer shiny stringr tidyr]; }; CNprep = derive2 { name="CNprep"; version="2.0"; sha256="08dpjikx3ldqzw2kwb12q0kbw15qzl09srjdfs0sz9si0x6bfxs6"; depends=[mclust rlecuyer]; }; CNull = derive2 { name="CNull"; version="1.0"; sha256="14hy86zg18hqxi63bfzrpkz70yrzfxp2v2pva5xnrvx9dmlyz820"; depends=[ape Matrix PhyloMeasures Rcpp]; }; COBRA = derive2 { name="COBRA"; version="0.99.4"; sha256="1r1cw12d7c148pcgcg08bfsr1q1s736kfpyyss6b4d7ny7wgmqy4"; depends=[]; }; @@ -660,16 +674,15 @@ in with self; { COMBAT = derive2 { name="COMBAT"; version="0.0.4"; sha256="0m700pl33frdpc9y16y4zyh1ixpardh0r5kmz8a78jrh1acn30id"; depends=[corpcor mvtnorm]; }; COMPoissonReg = derive2 { name="COMPoissonReg"; version="0.7.0"; sha256="144vf3vfn5msc8p67q65frza8xyi9nqccjq47fnv33w5h0d9wlxj"; depends=[Rcpp]; }; CONCUR = derive2 { name="CONCUR"; version="1.3"; sha256="1xkk5mbkysgrclv7km2pf4bnnm99a9q0dkb68vllrdmzsphjmxp9"; depends=[CompQuadForm dplyr mgcv]; }; - CONDOP = derive2 { name="CONDOP"; version="1.0"; sha256="0si9nm93wk9lif3r6jh2nxr4sjq1iqyfavbykja3zcy6yn05i19s"; depends=[earth GenomeInfoDb GenomicRanges IRanges mclust plyr randomForest rminer S4Vectors seqinr]; }; CORE = derive2 { name="CORE"; version="3.0"; sha256="0wq9i7nscnzqiqz6zh6hglm7924261bw169q3x6l9i6jgqhvn32d"; depends=[]; }; - CORElearn = derive2 { name="CORElearn"; version="1.54.2"; sha256="0nsqmmwngv04dp4wpm9irybiv7bk35x78b8ib4mgk11yzm0wl1nn"; depends=[cluster nnet plotrix rpart rpart_plot]; }; + CORElearn = derive2 { name="CORElearn"; version="1.56.0"; sha256="0zdx9ljxjzkj4kbrv856l3jaiv2s7dqycr3b3x7k5g05iv1ic6lv"; depends=[cluster nnet plotrix rpart_plot]; }; CORM = derive2 { name="CORM"; version="1.0.2"; sha256="0g5plafx2h1ija8jd6rxvy8qsrqprfbwbi1kq1p4jdr9miha20nv"; depends=[cluster limma]; }; COSINE = derive2 { name="COSINE"; version="2.1"; sha256="10ypj849pmvhx117ph3k1jqa62nc4sdmv8665yahds7mh0ymhpjj"; depends=[genalg MASS]; }; COST = derive2 { name="COST"; version="0.1.0"; sha256="06xgnsccd621ihlrdmnnh14vh83q1r2bnp3iqi7vp5553b3y4l3w"; depends=[copula mvtnorm]; }; COUNT = derive2 { name="COUNT"; version="1.3.4"; sha256="02f7779fy0d2bql88x5v9csbxljhnyvl8wb8h83xrmwl7kaxsdpy"; depends=[MASS msme sandwich]; }; COUSCOus = derive2 { name="COUSCOus"; version="1.0.0"; sha256="1ykqi72v8v1b3g9qy6h34dvk5fynzf1rl2mby65p08axmaba5798"; depends=[bio3d matrixcalc]; }; - COVID19 = derive2 { name="COVID19"; version="2.3.1"; sha256="0a2d7hl22hmmwqnv88y7n2habvn85zi3gn2q18n16w03wp1kmnvq"; depends=[dplyr tidyr]; }; - COVIDIBGE = derive2 { name="COVIDIBGE"; version="0.1.0"; sha256="0r505811wnskya507f9qwwy1j4gkv3cj4h8nl42892m3vk07w0vl"; depends=[dplyr magrittr RCurl readr readxl survey tibble timeDate]; }; + COVID19 = derive2 { name="COVID19"; version="2.3.2"; sha256="0ipsjmvsd2sngwgchv9mbhipxqlsysaa4vmla198bprzj1r6m424"; depends=[dplyr tidyr]; }; + COVIDIBGE = derive2 { name="COVIDIBGE"; version="0.1.4"; sha256="0yc1aqndbxrbycfqsc6hmdja7pa5mcvkqkrc1lpzw3njci97w51h"; depends=[dplyr httr magrittr projmgr RCurl readr readxl survey tibble timeDate]; }; CP = derive2 { name="CP"; version="1.6"; sha256="18zblf13riiz3mq3hkvg6vhiwjzpsn6mvgc2p0bqyldy98v4aisd"; depends=[survival]; }; CPAT = derive2 { name="CPAT"; version="0.1.0"; sha256="0zygncwww3cazwmx06bhzq0g41xcqfpw307azdhygc8jmcy6qj71"; depends=[purrr Rcpp RcppArmadillo Rdpack]; }; CPBayes = derive2 { name="CPBayes"; version="1.1.0"; sha256="1kw0r8spqm0s7cb3w5gplw67mhfmcbbf3ligngbary77ghkzirnb"; depends=[forestplot MASS mvtnorm purrr]; }; @@ -677,7 +690,6 @@ in with self; { CPMCGLM = derive2 { name="CPMCGLM"; version="1.2"; sha256="07hx2ik5zg05w1h6i94398mp54q958phws9ydgp6syjqlp9dpf1p"; depends=[abind mvtnorm plyr]; }; CPP = derive2 { name="CPP"; version="0.1.0"; sha256="1kdf43pnavjbmxkvrj78fiwl0ykln9x9ck8pcivhj9q5rsfbhbh4"; depends=[ineq kappalab mc2d]; }; CPsurv = derive2 { name="CPsurv"; version="1.0.0"; sha256="1r68pp3jbcbwgfac132h30qx6ah780aychr49rlncn17xbdalxsh"; depends=[muhaz survival]; }; - CR = derive2 { name="CR"; version="1.0"; sha256="0smb2i560dwbxg3mp1svfxmaiw193pd3klwqq0i27czf07k1xfvj"; depends=[]; }; CRAC = derive2 { name="CRAC"; version="1.0"; sha256="0vnqmmmwakx5jnzqp20dng35p7rvmz3ypm2m7bs41m8nhh2wq1xa"; depends=[]; }; CRANsearcher = derive2 { name="CRANsearcher"; version="1.0.0"; sha256="09gw1s28gb0l2cn4w3asl6zlr7wfacxwafbdrayajwckyfkjl5dl"; depends=[curl dplyr DT lubridate miniUI shiny shinyjs stringr]; }; CREAM = derive2 { name="CREAM"; version="1.1.1"; sha256="1lccpwn6c5pmykgf689gvvpqdcilkys4vclpxjhllhanjrfhcs3q"; depends=[]; }; @@ -689,15 +701,16 @@ in with self; { CRWRM = derive2 { name="CRWRM"; version="0.0.1"; sha256="0w6lg5q2c0w5p9vg5qr32pycyl8d1zp0s55jlvf2xhmqx34677hd"; depends=[]; }; CSESA = derive2 { name="CSESA"; version="1.2.0"; sha256="0pv6iabq1w22qbhlsbckdvva4n7igpzrjnrahmq83a6wxgvjbf5j"; depends=[Biostrings]; }; CSFA = derive2 { name="CSFA"; version="1.2.0"; sha256="1nkyhk8qhrrlx8v26yw86l954m4xfcxma4pqbhgw95jvqql5h3li"; depends=[elasticnet fabia FactoMineR pls randomcoloR snowFT]; }; + CSGo = derive2 { name="CSGo"; version="0.5.2"; sha256="19iac6pp4y2vpx1q5zg41pkjwhddwayv0vharl8xd0hr0wqwzxwc"; depends=[dplyr extrafont fuzzyjoin ggplot2 httr jsonlite magrittr purrr stringr]; }; CSMES = derive2 { name="CSMES"; version="1.0.0"; sha256="1ddr2b39d7nwan6dqf5xx9h6gzfxxk50r1d9vbpb9hc8a7d15vnp"; depends=[caTools data_table mco ROCR rpart zoo]; }; - CSTools = derive2 { name="CSTools"; version="3.1.0"; sha256="11mw7kl85m5l6ixlsbbmb9rfy6z6mfjdbgwmwrggjn4wbb0d0p76"; depends=[abind ClimProjDiags data_table ggplot2 maps multiApply ncdf4 plyr qmap rainfarmr RColorBrewer reshape2 s2dv s2dverification verification]; }; + CSTools = derive2 { name="CSTools"; version="4.0.0"; sha256="04i08990glac58yj8plx3a6yhjs0kx1zir7as1mgwsa74q9r3c8y"; depends=[abind ClimProjDiags data_table easyVerification ggplot2 maps multiApply ncdf4 plyr qmap rainfarmr RColorBrewer reshape2 s2dv s2dverification verification]; }; CSUV = derive2 { name="CSUV"; version="0.1.1"; sha256="1gh8gxwnrg4j017c08xfhm57rwci24sqmxxx00k3d0mw6j0mbdvw"; depends=[caret doParallel DT futile_logger ggplot2 glmnet HDCI MASS ncvreg relaxo reshape2 shiny shinyjs]; }; CSclone = derive2 { name="CSclone"; version="1.0"; sha256="0lqsqsgh2sf44fr1r7g179556v294yr1wy7x4320g7adxshrwyh5"; depends=[DNAcopy lpSolve mcclust moments]; }; CSeqpat = derive2 { name="CSeqpat"; version="0.1.2"; sha256="1nqk873cagpn4fba4rmyzb6hni1p5lqcvsr9givrcm0gfx756w1h"; depends=[NLP tm]; }; CTAShiny = derive2 { name="CTAShiny"; version="0.1.0"; sha256="18qw8nx1r4gwlxj9zxn4hllpn29fv3i4fgwyl5fh3qsv9hmbvi0x"; depends=[epitools rpivotTable shiny shinyMatrix]; }; - CTD = derive2 { name="CTD"; version="0.99.8"; sha256="1mq9hb5b8x08lc0x9xng09v1bw1w15fscvdj9lmwvwjg2hmjqfdg"; depends=[gmp igraph]; }; + CTD = derive2 { name="CTD"; version="1.0.0"; sha256="0hv3g47sa66xwikrwmc61mdlqlh2p6hrvf0bbp2r71wf2842idqb"; depends=[gmp igraph]; }; CTM = derive2 { name="CTM"; version="0.2"; sha256="0h1lpygjq46nwkn4km49bngvxmgrnh3csrfln3yjr9yyzs7d3lz1"; depends=[jiebaR plyr]; }; - CTP = derive2 { name="CTP"; version="2.0.0"; sha256="10nzqswzga0rnsv5ivz120a9ybarnzq690xnxzfhsswhbc5mld6i"; depends=[clinfun diagram dplyr Gmisc magrittr MASS shape survival]; }; + CTP = derive2 { name="CTP"; version="3.0.1"; sha256="02f423y7yx0hchzghfdbrrljsfq3af1wcbvk8z1q5wyzq99xcag5"; depends=[clinfun diagram dplyr emmeans Gmisc magrittr MASS shape survival]; }; CTShiny = derive2 { name="CTShiny"; version="0.1.0"; sha256="0lmzf02w8j4rgz1kh7jwvl0sb6y38r56gwmsf7pkc00w1dskb722"; depends=[caret dplyr e1071 party rhandsontable rmarkdown rpart rpart_plot shiny]; }; CTShiny2 = derive2 { name="CTShiny2"; version="0.1.0"; sha256="13klj1h0m80hlf5hbbzm2xriy37ky772pk1fm4b6k3xma7ss2a6q"; depends=[caret dplyr e1071 party rhandsontable rmarkdown rpart rpart_plot shiny]; }; CTT = derive2 { name="CTT"; version="2.3.3"; sha256="02z354gf7rzh9xzyflmsag4hgmqgv3sr9s9ja903rwdz1pjqrlff"; depends=[]; }; @@ -713,32 +726,33 @@ in with self; { CVST = derive2 { name="CVST"; version="0.2-2"; sha256="05l3yzkfrbds09ah9cdwn2sn4ryhq78lz33ryzrgkv176jc8qjw5"; depends=[kernlab Matrix]; }; CVThresh = derive2 { name="CVThresh"; version="1.1.1"; sha256="19d7pslzj8r3z5gn3cplpz2h2ayz6k1nrfx3s2b7a8w1il3vmi69"; depends=[EbayesThresh wavethresh]; }; CVTuningCov = derive2 { name="CVTuningCov"; version="1.0"; sha256="1bwzis82lqwcqp2djy4bnd3vvjr47krlv3pdc5msh12wcs0xhs7n"; depends=[]; }; - CVXR = derive2 { name="CVXR"; version="1.0-8"; sha256="02hb7msmsal1b4svpb8bxvd8d4mpvscp48ajhsggh576h23y1mnv"; depends=[bit64 ECOSolveR gmp Matrix osqp R6 Rcpp RcppEigen Rmpfr scs]; }; + CVXR = derive2 { name="CVXR"; version="1.0-9"; sha256="0dxhcz74x6p08ipbw9bn5bc3fzxymqahrsld04yq4r7gff2ifwh9"; depends=[bit64 ECOSolveR gmp Matrix osqp R6 Rcpp RcppEigen Rmpfr scs]; }; + CVarE = derive2 { name="CVarE"; version="1.1"; sha256="132bsqvdhalifn47xka23ikas1axxkg4jw8yja6ba8dflb8r753i"; depends=[mda]; }; CVcalibration = derive2 { name="CVcalibration"; version="1.0-1"; sha256="0ca582fnysrldlzxc3pihsph9pvdgygdh7sfzgxvr5fc3z1jbjzb"; depends=[]; }; CVglasso = derive2 { name="CVglasso"; version="1.0"; sha256="1bh09cd0yabhqv5yfahhvayx3f09yqapzl1yr9nc9xqwyx1d0cfd"; depends=[doParallel dplyr foreach ggplot2 glasso]; }; CVrisk = derive2 { name="CVrisk"; version="1.0.0"; sha256="1cv9nkmligbl46mabhhlp35csgmqsri536qr6vxs493xmq4wjlyf"; depends=[]; }; CaDENCE = derive2 { name="CaDENCE"; version="1.2.5"; sha256="1z3p5y1l67r470x6wrhnyjvw1ndppcm08fpj99x122j7kn6byff2"; depends=[pso]; }; - CaPO4Sim = derive2 { name="CaPO4Sim"; version="0.1.0"; sha256="1ihkx0swj9adz2pgfm9c20pcipq748czkyg76q3y0zk1j987nfik"; depends=[DT htmltools magrittr plotly purrr rintrojs shiny shinycssloaders shinydashboard shinydashboardPlus shinyjqui shinyjs shinyWidgets visNetwork]; }; + CaPO4Sim = derive2 { name="CaPO4Sim"; version="0.2.0"; sha256="0s4mqlas41ll656hj1imzqydgwgw002d469z01fjdcs4d6daljw6"; depends=[DT htmltools magrittr plotly purrr rintrojs shiny shinycssloaders shinydashboard shinydashboardPlus shinyjqui shinyjs shinyWidgets visNetwork]; }; Cairo = derive2 { name="Cairo"; version="1.5-12.2"; sha256="14hgz5wmnhlbqkd1g662n1agmjnlj3pq69gfng1vb0ivr02l2lnx"; depends=[]; }; - CalSim = derive2 { name="CalSim"; version="0.5.1"; sha256="1412i1d4i184yc34j221i59m4w46s02467sjnr1a955faj1k3c9k"; depends=[ExactMultinom spatstat]; }; + CalSim = derive2 { name="CalSim"; version="0.5.2"; sha256="1ij3xaizq1lpq5vg25i8pz4khm7ab81kzfayp6a914n0jgxvprj7"; depends=[ExactMultinom spatstat spatstat_geom]; }; Calculator_LR_FNs = derive2 { name="Calculator.LR.FNs"; version="1.3"; sha256="03qg9rnz623dwnp68xhhsh9788s49n6xp0migg1nnjaqhrahlgdd"; depends=[]; }; CalibratR = derive2 { name="CalibratR"; version="0.1.2"; sha256="1hnmhijckxd35h8mhpzqpglk1ykdih2c5kg17myc7cci5xjk9nfr"; depends=[doParallel fitdistrplus foreach ggplot2 pROC reshape2]; }; CalibrateSSB = derive2 { name="CalibrateSSB"; version="1.3.0"; sha256="0qwqvyrpprxc5v0ng6qjp9gmdf0n0iiv46z14d8h303xpi84g42x"; depends=[survey]; }; - CamelUp = derive2 { name="CamelUp"; version="2.0.2"; sha256="102adw46rwhjx2wp34lhjxlgwi858dpmlzpj5wq85cnx5qkx01yx"; depends=[data_table dplyr ggplot2 magrittr Rcpp shiny]; }; + CamelUp = derive2 { name="CamelUp"; version="2.0.3"; sha256="1d3ywb4bxnn149api6lqry8q9lasng79hzka9ndr5cv38pkbvva9"; depends=[data_table dplyr ggplot2 magrittr Rcpp shiny]; }; CancerGram = derive2 { name="CancerGram"; version="1.0.0"; sha256="1p612dbn6dxn3nz8m0pzlsbczg3f8gwqk9q0fnxbcdlbll0vf2k0"; depends=[biogram devtools dplyr pbapply ranger shiny stringi]; }; Canopy = derive2 { name="Canopy"; version="1.3.0"; sha256="0979hpphzhf4v71jx0shh3l8nffmpsn9l6f8ip2wxzcyx571i1wd"; depends=[ape fields pheatmap scatterplot3d]; }; CarletonStats = derive2 { name="CarletonStats"; version="2.0"; sha256="0pgzvw6gf8kjv8ndprwp4wlgdgh5sb75ga8z5syfw57fb05v7ac3"; depends=[]; }; - Carlson = derive2 { name="Carlson"; version="1.0.0"; sha256="1m030x30cd0w2r6y280v9kpqalx6djhyx9hfzhk1qbqh5rk7br2l"; depends=[]; }; - Cascade = derive2 { name="Cascade"; version="1.8"; sha256="0d75a9f43ligyjv62476plb86ipfq9y7g9njq4rx84cp17vbb662"; depends=[abind animation cluster igraph lars lattice limma magic nnls survival tnet VGAM]; }; - CascadeData = derive2 { name="CascadeData"; version="1.2"; sha256="0czc41f1vj61rkdl6gnnnga3qliyxp0ffl5j9wrhrlwnbdaknics"; depends=[]; }; + Carlson = derive2 { name="Carlson"; version="1.0.1"; sha256="1flh1161hx62xsgw0k7rncvwgzgsay5xwihcykyypwbdlccmqhiw"; depends=[]; }; + Cascade = derive2 { name="Cascade"; version="2.0"; sha256="0zd9krlklmsy03kya5bdx2hj25fvfhwcx431q618ccw44c11b590"; depends=[abind animation cluster igraph lars lattice limma magic nnls survival tnet VGAM]; }; + CascadeData = derive2 { name="CascadeData"; version="1.3"; sha256="0vmr9gfmgrgan9q5hsavqfdd76dpm19a53m9s8jkj14rsd47bpll"; depends=[]; }; CatDataAnalysis = derive2 { name="CatDataAnalysis"; version="0.1-3"; sha256="15wz7yjb83rd6d3xx0lb0p4x3ccnqpdkfanmbhykia50y8y32k5n"; depends=[]; }; CatDyn = derive2 { name="CatDyn"; version="1.1-1"; sha256="0gkaxs7apqhq7mp3chjsyhrnk3qkk11f8p7smmyj6h73888ry8jn"; depends=[BB optimx]; }; CatEncoders = derive2 { name="CatEncoders"; version="0.1.1"; sha256="1q9wzq06lac8z9y8b65alsxpb48bw8wqmifd893kknk51xq6r9kl"; depends=[data_table Matrix]; }; - CatPredi = derive2 { name="CatPredi"; version="1.1"; sha256="1fqz2mb3xhpzvamf0bpqfql3vd86vq6fq7n6p8xq7lraj1w77lys"; depends=[CPE mgcv rgenoud rms survival]; }; - CatReg = derive2 { name="CatReg"; version="2.0.1"; sha256="1wlzs7my9bdjb85bayq3rgb9mw5aqzhsf7s1j498w60z7hsgf7df"; depends=[Rcpp Rdpack]; }; + CatReg = derive2 { name="CatReg"; version="2.0.2"; sha256="0f1lnrfa70cpqj58655y50h9cw8sqzbfvl9ck9a2xyjv2a7c41mi"; depends=[Rcpp Rdpack]; }; CateSelection = derive2 { name="CateSelection"; version="1.0"; sha256="194lk6anrb05gaarwdg8lj5wm6k61b4r702cja3nf3z91i8paqi7"; depends=[]; }; + CauchyCP = derive2 { name="CauchyCP"; version="0.1.0"; sha256="012aw8cgrwwcsbs93nfsdlv1j72mc96gaxvdrhs9njqd9anamsgl"; depends=[survival]; }; CausalGAM = derive2 { name="CausalGAM"; version="0.1-4"; sha256="1riz11hfg96iks7734rg692l75nfrd3hmr9gw563j27rkk1nfkl6"; depends=[gam]; }; - CausalImpact = derive2 { name="CausalImpact"; version="1.2.4"; sha256="0nszqvaxmz9jrb7wqdmjjplajk8mxpyyl14n2fm5p4pyx8srwphq"; depends=[assertthat Boom bsts dplyr ggplot2 zoo]; }; + CausalImpact = derive2 { name="CausalImpact"; version="1.2.6"; sha256="19idwk5hbajgzzhb2cwi49n0ivpn7k35b9f38jrhx1n055pf73md"; depends=[assertthat Boom bsts dplyr ggplot2 zoo]; }; CausalKinetiX = derive2 { name="CausalKinetiX"; version="0.2.1"; sha256="0haxw4vvbw48hlvsl1d1y3xm48qm5vl0d3k5lj89ajwc618nk5jg"; depends=[cvTools deSolve fda glmnet pspline quadprog randomForest sundialr]; }; CausalMBSTS = derive2 { name="CausalMBSTS"; version="0.1.0"; sha256="19ils8254vrbm3hbrjkk2r7xczr52zjhd38dfy7p1ksd2lm6x5qy"; depends=[CholWishart forecast KFAS MASS Matrix MixMatrix]; }; CausalQueries = derive2 { name="CausalQueries"; version="0.0.3"; sha256="1hnxxyix9zrg5ryzqksv0cl8m3n3n660dbg1msa0pn18dnbjbmj0"; depends=[BH dagitty dplyr gtools randomizr Rcpp RcppEigen rlang rstan rstantools StanHeaders stringr]; }; @@ -754,19 +768,20 @@ in with self; { CerioliOutlierDetection = derive2 { name="CerioliOutlierDetection"; version="1.1.9"; sha256="0s3pd4y165v69m4wmg9jlc7dl4gz64la9yic67l3n4242wa84p19"; depends=[robustbase]; }; CfEstimateQuantiles = derive2 { name="CfEstimateQuantiles"; version="1.0"; sha256="1qf85pnl81r0ym1mmsrhbshwi4h1iv19a2wjnghbylpjaslgxp6i"; depends=[]; }; ChIPtest = derive2 { name="ChIPtest"; version="1.0"; sha256="1yn5b5s56k2dbhw6damxj18xbaiz180ym7fiq2i3p2gkcgwpddbz"; depends=[]; }; - ChainLadder = derive2 { name="ChainLadder"; version="0.2.11"; sha256="0qqfvhgybdp6l74nswc6xcilzbv54291p8mwjvdhjg29782szyyz"; depends=[actuar cplm ggplot2 lattice MASS Matrix statmod systemfit tweedie]; }; - ChangePointTaylor = derive2 { name="ChangePointTaylor"; version="0.1.0"; sha256="0yywsml2sdj8r1m6if8l6cp77hm7scbqj61ph4kqiii7va8isy90"; depends=[bench dplyr ggplot2 magrittr purrr Rcpp rlang tidyr]; }; + ChainLadder = derive2 { name="ChainLadder"; version="0.2.12"; sha256="0ampn1nwkkib7mh7cn312r6ld7l68fdv918ncl16i4787mfmmrxi"; depends=[actuar cplm ggplot2 lattice MASS Matrix statmod systemfit tweedie]; }; + ChangePointTaylor = derive2 { name="ChangePointTaylor"; version="0.1.1"; sha256="1jfymyqdcyxfgn15y0iff7midkfd69fh3amz201idg6248g1y6n8"; depends=[bench dplyr ggplot2 magrittr purrr Rcpp rlang tidyr]; }; ChangepointTesting = derive2 { name="ChangepointTesting"; version="1.0"; sha256="1nb78b1jpp0wpy9ah2fxkh53hlmb2f82b68msbfhancb8zp2lclv"; depends=[]; }; - ChannelAttribution = derive2 { name="ChannelAttribution"; version="2.0.2"; sha256="1s8g3mwhmmxyq4rkgsdfpf9n8rfw7mgp2hjjm1n5dajfsj4c11md"; depends=[Rcpp RcppArmadillo]; }; + ChannelAttribution = derive2 { name="ChannelAttribution"; version="2.0.4"; sha256="1m9fwlkd39q5dmlw71rasj2cjnlj03295ck9lgb7yl72v7sws22d"; depends=[Rcpp RcppArmadillo]; }; ChannelAttributionApp = derive2 { name="ChannelAttributionApp"; version="1.3"; sha256="0n9g8wwvc8p5clypl7z23w8fs6d0c47bblijwd4pjwy26bcb4m8h"; depends=[ChannelAttribution data_table ggplot2 shiny]; }; Chaos01 = derive2 { name="Chaos01"; version="1.2.1"; sha256="1wk70l1y0yzbjcjp0r334l1q3hzki0vzn6wbza97mq9pz8wp050r"; depends=[]; }; - ChaosGame = derive2 { name="ChaosGame"; version="0.4"; sha256="10bq8i6b6zkg8nzq5np998xabyvijizxfbvw1m2nvfh74vxspj4p"; depends=[colorRamps ggplot2 gridExtra plot3D RColorBrewer rgl sphereplot]; }; + ChaosGame = derive2 { name="ChaosGame"; version="1.0"; sha256="18w2mq42x5ap9h31plh1j1ja4js4yjynz801xscgqhjr9r5d8kdx"; depends=[colorRamps ggplot2 gridExtra plot3D RColorBrewer rgl sphereplot]; }; ChargeTransport = derive2 { name="ChargeTransport"; version="1.0.2"; sha256="0mq06ckp3yyj5g1z2sla79fiqdk2nlbclm618frhqcgmq93h0vha"; depends=[]; }; CheckDigit = derive2 { name="CheckDigit"; version="0.1-1"; sha256="0091q9f77a0n701n668zaghi6b2k3n2jlb1y91nghijkv32a7d0j"; depends=[]; }; - ChemoSpec = derive2 { name="ChemoSpec"; version="5.3.2"; sha256="0f1jl018a5mbr5dn6996n3il1y3cc6iabvh1vqjf6f0wgxa2k94s"; depends=[ChemoSpecUtils plyr readJDX]; }; - ChemoSpec2D = derive2 { name="ChemoSpec2D"; version="0.4.176"; sha256="0a6vs1zr0kjcaph0vkxzhy6i5fzv48nkdzavvq788mqaszd50kxv"; depends=[ChemoSpecUtils colorspace readJDX]; }; - ChemoSpecUtils = derive2 { name="ChemoSpecUtils"; version="0.4.51"; sha256="0wwzv6qkm6iya6gld1jlxk1hnzf6ndpwjppk93bi6pgjkgjq5i5g"; depends=[plyr]; }; + ChemoSpec = derive2 { name="ChemoSpec"; version="5.3.11"; sha256="16kvms13k5m5f26zhwy37jjzn73q06qmh4wvdk49ry3hqakcnyry"; depends=[ChemoSpecUtils plyr readJDX]; }; + ChemoSpec2D = derive2 { name="ChemoSpec2D"; version="0.4.187"; sha256="1rdb47gd5kpm9q15js4q3hdpja5zxq9ghjk3fwkqi4ivnxgpmg6r"; depends=[ChemoSpecUtils colorspace readJDX]; }; + ChemoSpecUtils = derive2 { name="ChemoSpecUtils"; version="0.4.96"; sha256="15pbpfl3h351p4s0k5jw5i8l1dkafv4g420q9dh9k7qnhh3s8rzc"; depends=[plyr]; }; ChillModels = derive2 { name="ChillModels"; version="1.0.2"; sha256="06hgg893anh5z8an4l1xl4liz7d0m79n21h116vkdlymayccydbr"; depends=[]; }; + ChineseNames = derive2 { name="ChineseNames"; version="1.0.0"; sha256="13hvapf5n743y6rqkrhfqan0ascmvl2jkv47ygxmxq99kddaxw4x"; depends=[bruceR data_table]; }; ChoR = derive2 { name="ChoR"; version="0.0-4"; sha256="08mildsx542zfm0kcdakcv7c71hb4jgbcq1lhidf0fz76zj1pzk1"; depends=[commonsMath rJava]; }; ChoiceModelR = derive2 { name="ChoiceModelR"; version="1.2"; sha256="0dkp3354gvrn44010s8fjbmkpgn1hpl4xbfs5xslql8sk8rw0n2c"; depends=[]; }; CholWishart = derive2 { name="CholWishart"; version="1.1.0"; sha256="1p92i5ibv9805fg8s5wrpxx63k4c1ihs1x2zlaz9vbkqypkl8aqz"; depends=[]; }; @@ -780,6 +795,7 @@ in with self; { CityWaterBalance = derive2 { name="CityWaterBalance"; version="0.1.0"; sha256="0nvm6bv2cxszjf33xgn1xcvhrgrgbdcar0jahwf7bs03gdlpmgi1"; depends=[dataRetrieval dplyr EcoHydRology geoknife lubridate reshape2 tgp xts zoo]; }; Ckmeans_1d_dp = derive2 { name="Ckmeans.1d.dp"; version="4.3.3"; sha256="0k08smvgplzcjq1rdbxyalw6iynr129bhdq0wcdn95baqpb5w556"; depends=[Rcpp Rdpack]; }; Claddis = derive2 { name="Claddis"; version="0.6.3"; sha256="0wq34n6vj5sdc22yf9p4g9iy8ssgr4kkrsr2ak4sqahadwgngl8i"; depends=[ape clipr geoscale phytools strap]; }; + ClaimsProblems = derive2 { name="ClaimsProblems"; version="0.1.0"; sha256="1v2bs6mz2jfsv4v3p3gmmpv8fg565nbqcnfcg6clgs9d54w6qrnm"; depends=[geometry rgl]; }; ClamR = derive2 { name="ClamR"; version="2.1-1"; sha256="0raz1n79g24a9mc93zj49r20xcmdziw6vvcw5sd3qyjp1ycia13c"; depends=[]; }; ClassComparison = derive2 { name="ClassComparison"; version="3.1.8"; sha256="0fd5s4697pvj295fzvvn5mislf42wfzrcvks17v98388rph586gl"; depends=[Biobase oompaBase]; }; ClassDiscovery = derive2 { name="ClassDiscovery"; version="3.3.13"; sha256="08ngmp77aff3dhh711wmzybk4ial2lv9750g3w19l0wjjd1rsm0m"; depends=[Biobase cluster mclust oompaBase oompaData]; }; @@ -789,9 +805,10 @@ in with self; { CliftLRD = derive2 { name="CliftLRD"; version="0.1-1"; sha256="0qsdv568klxg6chgw329jbfjmf6w61hly2vxp90yzdfkca03z2s4"; depends=[CNLTreg liftLRD]; }; ClimClass = derive2 { name="ClimClass"; version="2.1.0"; sha256="1r836md31z2r5d9xckkbalzbhm4kf5paljv71kxpy53q92k7yi91"; depends=[geosphere ggplot2 reshape2]; }; ClimDown = derive2 { name="ClimDown"; version="1.0.2"; sha256="0dbv5vn985bi9nqxhq7jcj6k38s8dlbqnln3adgd0ih2fwilvalg"; depends=[abind fields foreach ncdf4 PCICt seas udunits2]; }; - ClimInd = derive2 { name="ClimInd"; version="0.1-2"; sha256="0brimmkr8ccdbpmcmgbd8ydx4cy0yblfrzcgx151x83wskzq04sj"; depends=[chron SPEI weathermetrics]; }; - ClimMobTools = derive2 { name="ClimMobTools"; version="0.3.5"; sha256="0aljz21j5c4a6wwda40jb5dc43ym3cqqid7vl7v5gvyyp360nkb6"; depends=[climatrends httr jsonlite Matrix PlackettLuce RSpectra]; }; - ClimProjDiags = derive2 { name="ClimProjDiags"; version="0.1.0"; sha256="00w7ffcv9axddjvmc0w58c9ncy8z58lf651c5pxsq7492x3vifcm"; depends=[multiApply PCICt plyr]; }; + ClimInd = derive2 { name="ClimInd"; version="0.1-3"; sha256="0n5kd001nkpks16c3msvn2qvzyrjawa2rqwh8zph2qr5hgpwcpg7"; depends=[chron SPEI weathermetrics]; }; + ClimMobTools = derive2 { name="ClimMobTools"; version="0.3.9"; sha256="1mdzsmv0zc6jm5awppy9b1xqg29vy3j9lm2d88d7p6kag47z2n3n"; depends=[climatrends httr jsonlite Matrix PlackettLuce RSpectra]; }; + ClimProjDiags = derive2 { name="ClimProjDiags"; version="0.1.1"; sha256="16ygjdmdh4rys27iskd457gp4s15h48f7zmddi9qgam1klw3vza2"; depends=[climdex_pcic multiApply PCICt plyr]; }; + ClinSigMeasures = derive2 { name="ClinSigMeasures"; version="1.0"; sha256="0fw89a1q92ck32z6w4zn1ldvky6ag1gi7b9bbv10mhmqhq4w3k58"; depends=[]; }; ClinicalTrialSummary = derive2 { name="ClinicalTrialSummary"; version="1.1.1"; sha256="0b5by4sn9yvrvxr9921yqsgp8ma3g1hi2qbp5j9m836db1zjhyla"; depends=[Rcpp]; }; ClinicalUtilityRecal = derive2 { name="ClinicalUtilityRecal"; version="0.1.0"; sha256="17xj9cmdkjrzx7mshka2hlkxh8887sprdqix7fd8jcr9bmc6ad9r"; depends=[caret cowplot ggplot2 lattice nloptr]; }; CliquePercolation = derive2 { name="CliquePercolation"; version="0.2.0"; sha256="1zllhl1674734sr0hmfgwdyqlk4rcjdqqrd7rx30llqri478jdff"; depends=[colorspace igraph magrittr Matrix Polychrome qgraph]; }; @@ -799,30 +816,34 @@ in with self; { CluMP = derive2 { name="CluMP"; version="0.8.1"; sha256="1vpxl2rcknqx32b94b48iirkh7r7cdri9mcljrw29gsbvhrfc46k"; depends=[amap data_table dplyr ggplot2 MASS NbClust rlang tableone]; }; ClueR = derive2 { name="ClueR"; version="1.4"; sha256="0awl3ag48idg0396hcgqrh5f16mbgximr5xbxjiimib5zysdc558"; depends=[e1071]; }; ClusBoot = derive2 { name="ClusBoot"; version="1.0"; sha256="1wh9mv932zarl8w098lgv2jpanp6r8nzdkyayv8nxk7nddl0bn1k"; depends=[]; }; + ClusTorus = derive2 { name="ClusTorus"; version="0.0.1"; sha256="18166ffq8zsl3hjsr48qgqgdnwfpi8h6vcdx01ak1q67jkzqnw0w"; depends=[BAMBI ggplot2 igraph purrr rlang]; }; ClusVis = derive2 { name="ClusVis"; version="1.2.0"; sha256="06yckdl3gxjia1gjjqpc29lvy4f7qf47fncslng9ggjnks6il145"; depends=[MASS mgcv mvtnorm Rcpp RcppArmadillo Rmixmod VarSelLCM]; }; ClussCluster = derive2 { name="ClussCluster"; version="0.1.0"; sha256="1436849m2mnm8j7lf653zv8lcvvg2ch8kkks4bvr39kx21wxy8ss"; depends=[ggplot2 reshape2 rlang scales VennDiagram]; }; + ClustAssess = derive2 { name="ClustAssess"; version="0.1.1"; sha256="1was06w9glqg8dgawx40jkxngcr04bm58yjqyi9fy0qzvcf9m78x"; depends=[dplyr fastcluster ggplot2 igraph magrittr Matrix Rcpp rlang]; }; ClustBlock = derive2 { name="ClustBlock"; version="2.3.1"; sha256="16dhwrpw6c8l9nzk2k3wryhz9ydmnl3va1ncab6wl52gzdbd7c9j"; depends=[FactoMineR]; }; ClustGeo = derive2 { name="ClustGeo"; version="2.0"; sha256="1p5k2w1k7hnacbazzj2yhxh4z2jngnsl4v5a9b3c8z1dr4nhcwxc"; depends=[sp spdep]; }; - ClustImpute = derive2 { name="ClustImpute"; version="0.1.6"; sha256="1jv3hlbw2k94pw8vhyli9lnr3vb3czrh346rgd4wkiwk7c7a58bz"; depends=[ClusterR copula dplyr magrittr rlang]; }; ClustMMDD = derive2 { name="ClustMMDD"; version="1.0.4"; sha256="0sblf3crpai53dflhyi27yn6mg0xyy9dxhwsk8j57sq5vr50x686"; depends=[Rcpp]; }; ClustOfVar = derive2 { name="ClustOfVar"; version="1.1"; sha256="0grhkab7s58ji4cf7cxh7ahd2dxrj8aqfdf3119b40zxkxbwxcr0"; depends=[PCAmixdata]; }; ClustVarLV = derive2 { name="ClustVarLV"; version="2.0.1"; sha256="1wl4kkhf17fi3vgbv0ph0yii2l93cgisxm3s0g9w8zhyn60dwwb0"; depends=[doParallel foreach iterators plyr Rcpp RcppEigen]; }; Cluster_OBeu = derive2 { name="Cluster.OBeu"; version="1.2.3"; sha256="10i7mnaq968my1c5hi8bdsj05m64wlmrf4n4m118is5h1q7zss8r"; depends=[car cluster clValid data_tree dendextend jsonlite mclust RCurl reshape reshape2 stringr]; }; - ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="1.1.0"; sha256="1n2zsl3y4yg1l5kyjfghv6x5hf5520lwz17cvfkvp0m5h6jqfqzg"; depends=[dplyr magrittr]; }; - ClusterR = derive2 { name="ClusterR"; version="1.2.2"; sha256="1ky172bk15a78hky77vl60j7c81nq2495sxjrv53is25nkac7sjm"; depends=[ggplot2 gmp gtools Rcpp RcppArmadillo]; }; + ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="1.1.2"; sha256="1ha50yzc2arlz4c2g7r9w891fk775xfbhz0gky3zxawlsa02213s"; depends=[dplyr magrittr]; }; + ClusterR = derive2 { name="ClusterR"; version="1.2.4"; sha256="01vgr1mpm7l1lyhril5hm1l72aicqc4iwb0b15ypijb6hwkv7g47"; depends=[ggplot2 gmp gtools Rcpp RcppArmadillo]; }; ClusterRankTest = derive2 { name="ClusterRankTest"; version="1.0"; sha256="01gzalhibqcdx3a6yc2cm1v77rscva73v5m5m0qkrgqdp9c8ph2a"; depends=[]; }; ClusterStability = derive2 { name="ClusterStability"; version="1.0.3"; sha256="1laa5m3y1rc7jr8q3i9qb3izs7qmadz169w9xm8q3mm3834ngn9b"; depends=[cluster clusterCrit copula Rcpp WeightedCluster]; }; ClusteredMutations = derive2 { name="ClusteredMutations"; version="1.0.1"; sha256="1n31nnvpjh1faw751k8m3ga3wfl0yhdpnszwckqhfzlma1jr8z04"; depends=[seriation]; }; - Clustering = derive2 { name="Clustering"; version="1.7.1"; sha256="0al1vgik1qp4nxfm2hfz7m72q158czdkiv0fs9ka73hjwgzdvf1v"; depends=[advclust amap apcluster cluster ClusterR data_table doParallel dplyr foreach future gama ggplot2 gmp pracma pvclust shiny sqldf xtable]; }; + Clustering = derive2 { name="Clustering"; version="1.7.2"; sha256="1j8y0ynhlzrsh22cxnmcl0grl6fqx6nx329v5sd3ayam8xdpvjvf"; depends=[advclust amap apcluster cluster ClusterR data_table doParallel dplyr foreach future gama ggplot2 gmp pracma pvclust shiny sqldf xtable]; }; CoClust = derive2 { name="CoClust"; version="0.3-2"; sha256="04xv807785xv9kdspsspx1302ardv8gda06kd590lgawjixai7dh"; depends=[copula gtools]; }; CoDiNA = derive2 { name="CoDiNA"; version="1.1.2"; sha256="1zjj86z8ica9j0x2nfyq9y6nyp54w07dwskcsg7z6kqibrkfvaq9"; depends=[data_table igraph magrittr plyr reshape2 visNetwork]; }; CoFRA = derive2 { name="CoFRA"; version="0.1002"; sha256="0ldf84dxaanww3qkf64mz5gv3yv2rjp9m6dy64xckds66vw6x0m3"; depends=[gplots stringr]; }; CoImp = derive2 { name="CoImp"; version="1.0"; sha256="06y722flpiqpwq0p7ik86s09mdnvqw3hdybhdzn8vfns5swc8x1y"; depends=[copula gtools locfit nnet]; }; CoMiRe = derive2 { name="CoMiRe"; version="0.7"; sha256="19q9qq85xnxlw9zdijmpis83zw98r8spxvb8fsfzp3vyk7hk8gyg"; depends=[ggplot2 gtools KernSmooth mvtnorm NonpModelCheck Rcpp RcppArmadillo rlang splines2 truncnorm]; }; + CoOL = derive2 { name="CoOL"; version="1.0.1"; sha256="19b3g3i4d6rnd46hldvmh9wmfimns3pfi1n7fihgp3cbbwmp8598"; depends=[ClustGeo data_table ggplot2 mltools plyr pROC Rcpp RcppArmadillo wesanderson]; }; CoRpower = derive2 { name="CoRpower"; version="1.0.4"; sha256="08chsbbl74rskinp68pwzpvnxx5lkfqf71j7ryp1cwy7199h3jyw"; depends=[osDesign survival]; }; CoSMoS = derive2 { name="CoSMoS"; version="2.0.0"; sha256="1qnpfipf24szzrmkla7v5dn8g6mrg5x5lqsc6418mm1p795ym3ry"; depends=[animation cowplot data_table directlabels ggplot2 mAr Matrix matrixcalc MBA mvtnorm nloptr plotly pracma]; }; + CoTiMA = derive2 { name="CoTiMA"; version="0.3.9"; sha256="1bmkln7czskr7s4yqjc5nbbj67sggp003dhnmny6b8m8cd6nllb5"; depends=[abind crayon ctsem doParallel foreach lavaan MASS MBESS OpenMx openxlsx psych rootSolve RPushbullet scholar stringi zcurve]; }; CodataGS = derive2 { name="CodataGS"; version="1.43"; sha256="1bjn6s1f5jn64gwrvjz5kvwfkbqrqhavib6dj9k37rb5nzqkwhp6"; depends=[Matrix]; }; CodeDepends = derive2 { name="CodeDepends"; version="0.6.5"; sha256="0l7kiv3awx50glf5cs841b4zzsff1ml90f0zr868ygvwsr4ps1hq"; depends=[codetools graph XML]; }; + CohortPlat = derive2 { name="CohortPlat"; version="1.0.0"; sha256="0n61m88sdkcrgylqsl57rsikfn2r6z95ha2zl3a4l63kcwd3kdsx"; depends=[doParallel dplyr epitools forcats foreach ggplot2 openxlsx plotly purrr tidyr zoo]; }; CoinMinD = derive2 { name="CoinMinD"; version="1.1"; sha256="0invnbj5589wbs0k2w5aq9qak7axc3s0g9nw85c48lnl0v95s91i"; depends=[MCMCpack]; }; Coinprofile = derive2 { name="Coinprofile"; version="0.1.9"; sha256="1bcip62gm34cx5m8a1mx9px2rhgvdmsgnn6q9q40k8p5hw4cx9g0"; depends=[coin exactRankTests ggplot2 plyr Rdpack zoo]; }; CollapseLevels = derive2 { name="CollapseLevels"; version="0.3.0"; sha256="1d2grxh95893j260igh4yh2z3rm3zymlpadqyp6w3na91birazb4"; depends=[dplyr ggplot2 lazyeval magrittr]; }; @@ -833,13 +854,13 @@ in with self; { CombinS = derive2 { name="CombinS"; version="1.1-1"; sha256="06g41zbjl54cbhhs8q7l4bbvszclvbxn3m2dqg800d6ghs9vgl6v"; depends=[]; }; CombinePValue = derive2 { name="CombinePValue"; version="1.0"; sha256="0mlngyz2nq7s39javnnjbb5db93c5sg9daw2szng83mbyfza4hv2"; depends=[]; }; CombinePortfolio = derive2 { name="CombinePortfolio"; version="0.4"; sha256="0kj96i2ahq7ax1nx66jac8bbdiiyviwnzr4cr4gn0b8y580rdcwi"; depends=[]; }; - CommEcol = derive2 { name="CommEcol"; version="1.7.0"; sha256="1mgszqlv2p66gwz36qw2md7wyq35m1ncy49hjg0bllfv1df7ppk3"; depends=[adespatial ape betapart gmp picante vegan]; }; + CommEcol = derive2 { name="CommEcol"; version="1.7.1"; sha256="1s6x4mhcx64qdzmp83x3mzmwyj1biawmdj2y752xpm8gpxfjnbc0"; depends=[adespatial ape betapart gmp picante vegan]; }; CommT = derive2 { name="CommT"; version="0.1.1"; sha256="1kimm8z3k7p5lxsjnkb203js2rqn09grywxs890fab1hhgssgv2r"; depends=[ape ggplot2 gridExtra phangorn reshape]; }; CommonJavaJars = derive2 { name="CommonJavaJars"; version="1.0-6"; sha256="0l1zqygklv1s3xr6pjjrji3wmyqg7258qvgwf9c2qjim8p8y8lsr"; depends=[]; }; CommonMean_Copula = derive2 { name="CommonMean.Copula"; version="1.0.0"; sha256="0j489hb4vlj3xkdq9vf2qjmcfb8ccff82vsmz63f25ws9pgc2lk2"; depends=[mvtnorm pracma]; }; CommunityCorrelogram = derive2 { name="CommunityCorrelogram"; version="1.0"; sha256="1wkrm5lil595sc4ih3qsf4sgvfipzlav0n7339ixqw9zxm2pg4nj"; depends=[vegan]; }; Comp2ROC = derive2 { name="Comp2ROC"; version="1.1.4"; sha256="06hpbid9z1pzg7k4gqp2zn8l7sm375z32fsn54i27qbl3inp7m2d"; depends=[boot ROCR]; }; - CompAREdesign = derive2 { name="CompAREdesign"; version="1.5"; sha256="10c782r1sgwnm0yqfyg3m2x3k8dmpazvb1hy7gvb2kn0z6rzlpbh"; depends=[]; }; + CompAREdesign = derive2 { name="CompAREdesign"; version="1.7"; sha256="0h2b2n4fkg9894cdmpk0fysynapam476s24h4j60r67nivpzb3vq"; depends=[copula ggplot2 numDeriv rootSolve]; }; CompDist = derive2 { name="CompDist"; version="1.0"; sha256="02c18ksk6clv674yh79bzg3mh9hymzhal51j6g0rnvqd5ra8g66c"; depends=[actuar fExtremes numDeriv PearsonDS rmutil VGAM]; }; CompLognormal = derive2 { name="CompLognormal"; version="3.0"; sha256="1dhgr9l713l2n889bpa47lbg2qab0fz0r15qa928c0b9nz688ddm"; depends=[numDeriv]; }; CompModels = derive2 { name="CompModels"; version="0.2.0"; sha256="058yvwb7p6rj6g1hcwgdzgjv0lwg7m5hgrv1pjfi4dskaibd4k17"; depends=[]; }; @@ -851,16 +872,16 @@ in with self; { CompareTests = derive2 { name="CompareTests"; version="1.2"; sha256="1z96kh851bpr2szgyjszkpv6m5ma6abz7hrm50fgvfpgxkj7f4yi"; depends=[]; }; ComparisonCR = derive2 { name="ComparisonCR"; version="1.0.4"; sha256="10xw3ppkzpc3njc409ln7g6bg33csf2ilw3f11hn60ry5xbnn82y"; depends=[boot CIFsmry cmprsk]; }; ComparisonSurv = derive2 { name="ComparisonSurv"; version="1.0.9"; sha256="1xvxkj0i59fq05df6szx4k32w2447mxcx3877l2myag4x6i6c74l"; depends=[muhaz survival survRM2 TSHRC]; }; - Compind = derive2 { name="Compind"; version="2.1"; sha256="1cjvpgankifiql67imhxx382q2lz1jq9k0nrwzq560h0xizkak6i"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff np psych smaa spdep]; }; - ComplexUpset = derive2 { name="ComplexUpset"; version="0.7.3"; sha256="0hyxkr9y001gl49qs5d6rdjmykmgh24mwrjd8cjvh22q43pdn23n"; depends=[ggplot2 patchwork scales]; }; - Compositional = derive2 { name="Compositional"; version="4.2"; sha256="1a1cv5m5b79zavgzpz8hjzls3sm658n3f9qhv609g5681w2m6iq7"; depends=[codalm doParallel emplik FlexDir foreach MASS mda mixture nnet RANN Rfast Rfast2 sn]; }; + Compind = derive2 { name="Compind"; version="2.2"; sha256="1nl9l3fc7lp2cgwwzkrixpff3jn2vqvhjv4lccrsyz5n5an8hg3m"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff np psych smaa spdep]; }; + ComplexUpset = derive2 { name="ComplexUpset"; version="1.2.1"; sha256="1pb4plznb90s85fx2c12k3fgyz4vi0hks3jjgjzcfmdvfj6l676g"; depends=[colorspace ggplot2 patchwork scales]; }; + Compositional = derive2 { name="Compositional"; version="4.6"; sha256="1g6pjs8gfjdyp7iwv0fhq7m8d2ayd6w2pli34fzahl7dwp8fp2rz"; depends=[codalm Directional doParallel emplik FlexDir foreach glmnet MASS mda mixture NlcOptim nnet pchc RANN Rfast Rfast2 sn]; }; CompoundEvents = derive2 { name="CompoundEvents"; version="0.1.0"; sha256="03shw3016xc41a6by8pnpqs7mmnhs0qmg5aqd4hlfcy3dv2w9wkf"; depends=[]; }; Compounding = derive2 { name="Compounding"; version="1.0.2"; sha256="1xlb3ylwjv70850agir0mx79kcvs43h0n1sm22zcny3509s2r7lf"; depends=[hypergeo]; }; ConConPiWiFun = derive2 { name="ConConPiWiFun"; version="0.4.6.1"; sha256="1ziy646lbx297kia797xjxa8hyl826x1hiighyjslvnlvrhapx08"; depends=[Rcpp]; }; ConR = derive2 { name="ConR"; version="1.3.0"; sha256="1q93x2b7a2jgkybazk24x8gvwvjjvkhi1gy5zx1sc2f4arm73myq"; depends=[doSNOW fields foreach geosphere raster rgdal rgeos rnaturalearth sf snow sp tibble writexl]; }; ConSpline = derive2 { name="ConSpline"; version="1.2"; sha256="16r0v0llj0pri69jqxribp8dpzh6yn6acpq20aaky14fyh3i4q7x"; depends=[coneproj]; }; Conake = derive2 { name="Conake"; version="1.0"; sha256="1rj1rv8r53516jqhwp9xqqwjxh4gx1w47c0bw59f87wiy5pbchpf"; depends=[]; }; - ConcordanceTest = derive2 { name="ConcordanceTest"; version="0.1.0"; sha256="04csv3l9avrb304m55plnfhrhrc3kk1kbvzx7r83f3k9c09w41mc"; depends=[Rglpk]; }; + ConcordanceTest = derive2 { name="ConcordanceTest"; version="1.0.0"; sha256="03d780y7wik2j9l4bq50j8c3g4j3zh8wzq4al6zjch9g9krdankz"; depends=[Rglpk]; }; CondIndTests = derive2 { name="CondIndTests"; version="0.1.5"; sha256="0km4z8wnj5msg1pmphk2fccbw1cidsxv174817lwcyii9nf5iwsm"; depends=[caTools kernlab lawstat MASS mgcv mize pracma quantregForest randomForest RPtests]; }; CondReg = derive2 { name="CondReg"; version="0.20"; sha256="1ffnrjfjcb66i9nyvidkcn4k9pcj4r7xanjwzcxcrj2qm39apkqx"; depends=[]; }; ConfIntVariance = derive2 { name="ConfIntVariance"; version="1.0.2"; sha256="0xm3vh3vmf16faa3934100rnrg4rvlqkgjlsqa2smzcvy5vb86z4"; depends=[]; }; @@ -870,19 +891,20 @@ in with self; { Conigrave = derive2 { name="Conigrave"; version="0.4.4"; sha256="02nvk5ya9gr06ai8qnjw0xq6hfbrr91b6lx9gq08dbrnmpbmyvqz"; depends=[dplyr ggplot2 miceadds mitools ppcor stringdist stringr]; }; ConjointChecks = derive2 { name="ConjointChecks"; version="0.0.9"; sha256="097mhiz8zjmmkiiapr3zfx7v35xirg57nqp1swd72dixaa23nhr1"; depends=[]; }; ConnMatTools = derive2 { name="ConnMatTools"; version="0.3.5"; sha256="082y4xxnp42xa7db5hnbc9qlvkb50wwb3wzi0my04l55a9s0ril7"; depends=[]; }; - ConsRank = derive2 { name="ConsRank"; version="2.1.0"; sha256="0hp6zx3y8vwnpska7bnxpmkpgjlgfw6d7jpc0f7p77j0lqlj0xyc"; depends=[gtools proxy rgl rlist]; }; + ConsRank = derive2 { name="ConsRank"; version="2.1.1"; sha256="1yzq0fs0b0sxnm177xia57bcnpgc57x7y8anccp1qh18qkffnb87"; depends=[gtools proxy rgl rlist]; }; ConsReg = derive2 { name="ConsReg"; version="0.1.0"; sha256="0ck188ahzprzvqdh2q05bcg9b68dw3xiqqb1xirbm4rp5chyr419"; depends=[adaptMCMC data_table DEoptim dfoptim FME forecast GA GenSA ggplot2 MCMCpack Metrics nloptr Rcpp rlang Rsolnp]; }; ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.3.4.1"; sha256="157lnlv0idcasi8y31zk9864kdqrlcl409gza4jx5k131qlp2san"; depends=[caret mclust mixture mnormt mvtnorm]; }; ContourFunctions = derive2 { name="ContourFunctions"; version="0.1.1"; sha256="00p5bdiq8hj95lkr86iwyh50qw0d0d4gs9hhbzcix6lwn8dwqd3s"; depends=[]; }; ConvergenceClubs = derive2 { name="ConvergenceClubs"; version="2.2.1"; sha256="0mn0lnycz5pi821q52g1njjs2pcmvv8yynr13bh237c8cashk2n3"; depends=[lmtest sandwich]; }; ConvergenceConcepts = derive2 { name="ConvergenceConcepts"; version="1.2.2"; sha256="1pvcl0bgd4anrbn6wqxsd1s23ycsc7jhrk94yzwx67xx0qs9mmrw"; depends=[lattice tkrplot]; }; + Convolutioner = derive2 { name="Convolutioner"; version="0.1.0"; sha256="1ria4ii7zdqgrzgdx4c82dj4lg791iwy2y66fv1qyibws0ag3bhq"; depends=[]; }; CoopGame = derive2 { name="CoopGame"; version="0.2.1"; sha256="1c11b5l6r5csa6zw5a6lfqaygzhnp5jfdf0vkrxpl7fb4bbxhm31"; depends=[geometry gtools rcdd rgl]; }; CoordinateCleaner = derive2 { name="CoordinateCleaner"; version="2.0-18"; sha256="0gdvna1a43p419hrs78afas9w7xhiqaqr4yivbkjms3l9cr5zb87"; depends=[dplyr geosphere ggplot2 raster rgbif rgdal rgeos rnaturalearth sp tidyselect]; }; CopCTS = derive2 { name="CopCTS"; version="1.0.0"; sha256="1j0bhkjk181y9k69442diswgwax5whmh5vfqydhf3b1r5ll1wkm3"; depends=[copBasic copula msm]; }; Copula_Markov = derive2 { name="Copula.Markov"; version="2.8"; sha256="0wyb80jj9zgh7kn0nah7dljps72083c92hpds94dw4ccmw6cfwf6"; depends=[]; }; Copula_Markov_survival = derive2 { name="Copula.Markov.survival"; version="1.0.0"; sha256="1sxg0ir39f4hj4m6imija0c88j513j6fflcp7xc0599iglwsrbvs"; depends=[survival]; }; Copula_surv = derive2 { name="Copula.surv"; version="1.1"; sha256="1zs2jvb07948g2aspy8877j4hdzavd57lmv4x2yrf6gb4xzs3x3n"; depends=[]; }; - CopulaCenR = derive2 { name="CopulaCenR"; version="1.1.2"; sha256="1ksxqgb91vww5q4njidchxwia64g5229dvpxhqhfp8w6hvmib1k1"; depends=[caret copula corpcor flexsurv icenReg magrittr plotly pracma survival]; }; + CopulaCenR = derive2 { name="CopulaCenR"; version="1.1.3"; sha256="03hd6cw1mymkdcjf211g2c4m049d61hva8n4nxsrp2lpzxq3yz3s"; depends=[caret copula corpcor flexsurv icenReg magrittr plotly pracma survival]; }; CopulaDTA = derive2 { name="CopulaDTA"; version="1.0.0"; sha256="1bx0jvlbhaxf4yhrfpd5l5zp7kmp6f17ckb1y9974sgc7s3hpqcd"; depends=[ggplot2 plyr reshape2 rstan]; }; CopulaREMADA = derive2 { name="CopulaREMADA"; version="1.3"; sha256="152g8nfa3ksj0dlzlch9a6g18b1vi6dlw748a6m55haghchbyr9l"; depends=[matlab mc2d statmod tensor]; }; CopyDetect = derive2 { name="CopyDetect"; version="1.3"; sha256="1g3bwd805h62x93xvvn67acf9v6vn7s7ghxpvjhwcfdfj7fwzh6l"; depends=[mirt]; }; @@ -893,18 +915,19 @@ in with self; { CorporaCoCo = derive2 { name="CorporaCoCo"; version="1.1-0"; sha256="1s3wlcy6mnw9riivw5lc4gd6bjbsd77m15ipr95g46isdcrli8zb"; depends=[data_table RColorBrewer rlist]; }; CorrBin = derive2 { name="CorrBin"; version="1.6"; sha256="0iwad5qf7hqii02s5f85155c5s7v8ghnac4l6l3c45dshrpapp2m"; depends=[boot combinat dirmult geepack mvtnorm]; }; CorrMixed = derive2 { name="CorrMixed"; version="1.0"; sha256="0rj987k8pzsw9n9a20ky23rwc3zyqsl0fcibpmry7p8pw2miaj0z"; depends=[nlme psych]; }; - CorrToolBox = derive2 { name="CorrToolBox"; version="1.6.2"; sha256="0a12vdyqqhw46iladdkbc0hxsbq8pihg056k6hn1rv41g7r08y14"; depends=[BinNonNor BinOrdNonNor GenOrd moments mvtnorm psych]; }; + CorrToolBox = derive2 { name="CorrToolBox"; version="1.6.3"; sha256="1mvw23f411vcmjq8lz4jx559ix8iz1c9zaynpkaviqz007amh6wa"; depends=[BinNonNor BinOrdNonNor GenOrd moments mvtnorm psych]; }; CorrectOverloadedPeaks = derive2 { name="CorrectOverloadedPeaks"; version="1.2.17"; sha256="1g7irjbhwnbhk74y3qxcjlrsn2yz8q6wn7ih16wq669nswryxhxk"; depends=[bitops digest XML]; }; CorrectedFDR = derive2 { name="CorrectedFDR"; version="1.0"; sha256="15047cfjniljzhznkbzq3hyq221y9k7fa04f69zm0k0sxr627gxg"; depends=[]; }; CosW = derive2 { name="CosW"; version="0.1"; sha256="12l4w8b5jnr8773hxk7khrdn705x6bdbw7s8z8w95bfbbi12dj6v"; depends=[fdrtool pracma]; }; Counterfactual = derive2 { name="Counterfactual"; version="1.2"; sha256="1spryxvnkdz728rl4nb7zlqhynnh0b4m7lnhq4i1n13gfsz1m5j4"; depends=[doParallel doRNG foreach Hmisc quantreg survival]; }; - Countr = derive2 { name="Countr"; version="3.5.4"; sha256="10fzmqncbnr47x35xqpsmwzadv9j6r2svisrv8vfpp27mlvp9qwr"; depends=[boot car dplyr flexsurv Formula lattice lmtest MASS Matrix numDeriv optimx pscl RColorBrewer Rcpp RcppArmadillo Rdpack standardize VGAM xtable]; }; + Countr = derive2 { name="Countr"; version="3.5.5"; sha256="0w2bdcr84zjcgcn2vrx2nib7dxq8vm12di3ni57z4yx4syskg3ik"; depends=[boot car dplyr flexsurv Formula lattice lmtest MASS Matrix numDeriv optimx pscl RColorBrewer Rcpp RcppArmadillo Rdpack standardize VGAM xtable]; }; CountsEPPM = derive2 { name="CountsEPPM"; version="3.0"; sha256="0iw7sfrb4yyaagwm1f4q9av5zvzia1mp2ns287ppsw3k248lz0kb"; depends=[expm Formula lmtest numDeriv]; }; CovCombR = derive2 { name="CovCombR"; version="1.0"; sha256="07yd0zbvc9db2jw6xigfhxnbkxwb3gxlmywadz7fs3rva2if2ffx"; depends=[CholWishart Matrix nlme]; }; CovSel = derive2 { name="CovSel"; version="1.2.1"; sha256="02fsiykbg96ynqw25vfyrams7fs39xjmfhvb23zjbqb7ql6d0xdk"; depends=[dr MASS np]; }; CovSelHigh = derive2 { name="CovSelHigh"; version="1.1.1"; sha256="0dvvpkqml2k00gicpgp475z1rjspq3s37ys1mam29k54qlshhny6"; depends=[bartMachine bindata bnlearn doParallel doRNG foreach glmnet MASS Matching randomForest tmle xtable]; }; CovTools = derive2 { name="CovTools"; version="0.5.3"; sha256="0r3q97zl72v7i1d9nhxgsilqczihhfq6zzhl4cmz8rbk3b7c7qrc"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo Rdpack shapes SHT]; }; CovidMutations = derive2 { name="CovidMutations"; version="0.1.3"; sha256="03bl9frjfj8i7ydgi245113yzyg8rkgqxasicmqcjdd68zbz00kn"; depends=[cowplot dplyr ggplot2 ggpubr seqinr stringr VennDiagram]; }; + CoxICPen = derive2 { name="CoxICPen"; version="1.1.0"; sha256="0m6g4gi33y5vmpf790x38y8g8vpxvr5935lcz9vjw5kkmsjkln0g"; depends=[foreach]; }; CoxPhLb = derive2 { name="CoxPhLb"; version="1.2.0"; sha256="0jlh2k5ygj896sfx7dcw5qlb80bl64rsvqfayv0c6a107bmrzsw4"; depends=[survival]; }; CoxPlus = derive2 { name="CoxPlus"; version="1.1.1"; sha256="038wsz206bgc0pnzx403b5ihcwhxpkrpxmwvrvqcxf8333pb62l5"; depends=[Rcpp RcppArmadillo]; }; CoxR2 = derive2 { name="CoxR2"; version="1.0"; sha256="1fjsa403lbx0hi7b0gsdaz0q9axw521q4xzphbfbknify4y72md6"; depends=[survival]; }; @@ -918,14 +941,15 @@ in with self; { CropScapeR = derive2 { name="CropScapeR"; version="1.1.2"; sha256="1d2pyr0p7m7yw7n4ghvyxs2cwxyrpgc4238ma8fy8f29dfp7mnbq"; depends=[data_table dplyr httr magrittr raster RJSONIO sf]; }; CrossVA = derive2 { name="CrossVA"; version="0.10.0"; sha256="08mq8d6la5gz3yv5a3lc70dxdgf29q1vngi8lrgdy58p9415pxjv"; depends=[stringi]; }; CrossValidate = derive2 { name="CrossValidate"; version="2.3.4"; sha256="1q5wnw2llvlw3hbjg0zccipk3ns31m2339x1aj6m526zhvgl2wvx"; depends=[Modeler oompaBase]; }; - CruzPlot = derive2 { name="CruzPlot"; version="1.4.2"; sha256="1sbw0i0d3qh417ivxxc5hghn94x6055wm985bmm1hscj1ym4vaxq"; depends=[dplyr DT geosphere mapdata maps marmap shiny shinydashboard shinyjs stringr swfscDAS]; }; + Crossover = derive2 { name="Crossover"; version="0.1-20"; sha256="1mm8zc845v077rnhijammpq72dsm9smwiixr0iygcadb5vbkfpib"; depends=[CommonJavaJars crossdes digest ggplot2 JavaGD MASS Matrix multcomp Rcpp RcppArmadillo rJava xtable]; }; + CruzPlot = derive2 { name="CruzPlot"; version="1.4.5"; sha256="1vazhf82k93rc884idq6af1g8bw47id11jq4z0c10ybs95dgjbxj"; depends=[dplyr DT geosphere mapdata maps marmap shiny shinydashboard shinyjs stringr swfscDAS]; }; CrypticIBDcheck = derive2 { name="CrypticIBDcheck"; version="0.3-3"; sha256="1c7n020i9lxp0fam05k9v4az4rvx8fakhzi9fkma82smpl709x8q"; depends=[car chopsticks ellipse rJPSGCS]; }; CsChange = derive2 { name="CsChange"; version="0.1.6"; sha256="0ahgzir1rz5hh2jkgabp9vccg527vbvmkdyxf9lyz5yxkig3jv2s"; depends=[boot Hmisc rms survival]; }; Cubist = derive2 { name="Cubist"; version="0.2.3"; sha256="1x71n72n12alyl7d9vdf3xb3ks14lql4pxxxnimk2gq7brc5z10r"; depends=[lattice reshape2]; }; CustomerScoringMetrics = derive2 { name="CustomerScoringMetrics"; version="1.0.0"; sha256="166v0hbxy4xgbfqh7sx6zsrv4pghqpimx5xry3h2qwynnvr4ng1a"; depends=[]; }; CustosAscensor = derive2 { name="CustosAscensor"; version="0.1.0"; sha256="1axyhwf9rc9dvrrcrpmx69kp49nwb0an7csn9qbjmx9jwwav11l5"; depends=[]; }; CutpointsOEHR = derive2 { name="CutpointsOEHR"; version="0.1.2"; sha256="0r772zb7g10akcfnf2hnyvpvba4px9pgslyns7drmijdsh0ncnvj"; depends=[survival]; }; - Cyclops = derive2 { name="Cyclops"; version="3.1.0"; sha256="0xb9rd3bjgng4ydr4syrwibyix5h6a6ywq52pidg8g0wnbg8icfz"; depends=[Andromeda BH bit64 dplyr Matrix Rcpp RcppEigen rlang survival]; }; + Cyclops = derive2 { name="Cyclops"; version="3.1.1"; sha256="05nzf2i442xqmimafra95f9cwkj2xi27h7pki5fj3wng7ysyp1fa"; depends=[Andromeda BH bit64 dplyr Matrix Rcpp RcppEigen rlang survival]; }; CytobankAPI = derive2 { name="CytobankAPI"; version="1.3.0"; sha256="1rrqhsqv5xc58dvkrbs9c83pkqz5np59shm7xjmqxdjj2rxj8zqn"; depends=[curl httr jsonlite]; }; CytobankAPIstats = derive2 { name="CytobankAPIstats"; version="2.0"; sha256="0xczcgaxd8dv6fd1j5c8y4il852lq8859d1y16sxs8a3gqn9fbz2"; depends=[CytobankAPI pheatmap shiny shinyFiles xlsx]; }; CytobankBridgeR = derive2 { name="CytobankBridgeR"; version="1.0.0"; sha256="0m8gxbm3p9gvdszymqx10n5rzb406r4f70a0in798c56mp2rcsl4"; depends=[CytobankAPI]; }; @@ -937,7 +961,7 @@ in with self; { DAIME = derive2 { name="DAIME"; version="2.1.3"; sha256="099pbzgryz9lxhcqlrywcv8zl5af4ir5dyyqvgc16xi5bddxk7ld"; depends=[]; }; DAISIE = derive2 { name="DAISIE"; version="3.0.1"; sha256="10b55m4ycb07l0mfjx58zfmckk627arj575p9via6kr7lp1c3j59"; depends=[DDD deSolve doParallel foreach magrittr Matrix pracma subplex tensor testit]; }; DAKS = derive2 { name="DAKS"; version="2.1-3"; sha256="0vmpwxvksnmyq40faimbgpj0y3zbk519986n38ipwdfzllcg0zs4"; depends=[relations sets]; }; - DALEX = derive2 { name="DALEX"; version="2.0.1"; sha256="1hiknx55d91abyfj3w4a2xxin7f1q8h5k0041m7w93xjdc4kis98"; depends=[ggplot2 iBreakDown ingredients]; }; + DALEX = derive2 { name="DALEX"; version="2.2.0"; sha256="1qnjbhilv4jfmwqxfi9xc5ysrh8gr84a2a5imjfci7d1n3zcnryn"; depends=[ggplot2 iBreakDown ingredients]; }; DALEXtra = derive2 { name="DALEXtra"; version="2.0"; sha256="1fbl0idvvhpqn6qiw6pn426n1dvf0hdi228nkr23f2d08rgfbsxh"; depends=[DALEX ggplot2 gridExtra reticulate]; }; DALY = derive2 { name="DALY"; version="1.5.0"; sha256="1v7ld01xcn5jiygl1c3xhd5h71ip90lks87fs9gmpnivp8jz5cr5"; depends=[]; }; DAMOCLES = derive2 { name="DAMOCLES"; version="2.3"; sha256="0pk9gq82qa18fl7zp74d47bgy8lhj9rkvfq23w8844nz9kn58s1f"; depends=[ape caper DDD deSolve expm Hmisc Matrix matrixStats picante]; }; @@ -945,38 +969,39 @@ in with self; { DAP = derive2 { name="DAP"; version="1.0"; sha256="0zzb05yxfaqp6qnr979q20rqy8sl5l825mxs0x9366qr7mz5k5ws"; depends=[MASS]; }; DBEST = derive2 { name="DBEST"; version="1.8"; sha256="1a598g02hpfgv572gchllqkppynnsp4lx764jg0g66w3b66k0kdy"; depends=[zoo]; }; DBGSA = derive2 { name="DBGSA"; version="1.2"; sha256="04zqh9y3nqcdzs5jn8aaq5idy9zl450ikvl788xs860wlg692qv2"; depends=[fdrtool]; }; - DBI = derive2 { name="DBI"; version="1.1.0"; sha256="1r03j9rdcxb9bhxk40dkmy10ikz4yzsxhy3f9k9ix3x577xbfvd9"; depends=[]; }; + DBI = derive2 { name="DBI"; version="1.1.1"; sha256="0i0kfyg43nryyka2bjlgz4x75w965224qp36wz1hl7a2lswb6ajp"; depends=[]; }; DBItest = derive2 { name="DBItest"; version="1.7.0"; sha256="10fvij1bz3pvqqrg0s55x7bfgxh7nrnnjaxp8cwpk3wkp3c77pi5"; depends=[blob callr DBI desc hms lubridate R6 rlang testthat withr]; }; - DBfit = derive2 { name="DBfit"; version="1.0"; sha256="19jdf693ygwfchlqvh0kywid14v0b53p33rr2dvmaqmsc6pfxbbf"; depends=[Rfit]; }; + DBfit = derive2 { name="DBfit"; version="2.0"; sha256="1b5fy4xya5k31937ccjsq1gj9y39lh1vb48jfc0sr56isrx0c496"; depends=[Rfit]; }; DCA = derive2 { name="DCA"; version="2.0"; sha256="1acy33vyf814kr0aj6kdvi9f1qzgynwwzv57ll01gd0iqq36374f"; depends=[coin elasticnet GPArotation locfdr modeest mvtnorm PMA]; }; DCCA = derive2 { name="DCCA"; version="0.1.1"; sha256="06xdx79r7dr14dlk5vgcyd8ar4sc72imlyk66bnia1kvlynvdy69"; depends=[checkmate]; }; DCD = derive2 { name="DCD"; version="0.1.0"; sha256="0p6vk8fdvpcvb1bb5fwy3h1v8y3djlvcm5jl5lnx30ngqj6d7rcj"; depends=[data_table doParallel foreach ggplot2 igraph lattice lsa Matrix plyr qlcMatrix Rdpack ROCR WGCNA]; }; DCEM = derive2 { name="DCEM"; version="2.0.4"; sha256="1g4c7h02rv467sgvjv19s0w4xcm11mwfamfs3sdy44ra9dgaf1af"; depends=[MASS matrixcalc mvtnorm Rcpp]; }; + DCEtool = derive2 { name="DCEtool"; version="0.0.1"; sha256="0gvnxijxa46kgis0f8kq7hlfrr7k14jbcw421ajdjca41mqr43av"; depends=[DT idefix MASS shiny shinyjs shinythemes survival writexl]; }; DCG = derive2 { name="DCG"; version="0.9.3"; sha256="08718x6v3g7kpfv0gpgm19cn3d3ynj7yagzs0jic1j5rwvn04pfb"; depends=[]; }; DCGL = derive2 { name="DCGL"; version="2.1.2"; sha256="1dhkdvdglpsr0fzrfrrr6q76jhwxgrcjsiqn56s082y7v366xvs4"; depends=[igraph limma]; }; DCL = derive2 { name="DCL"; version="0.1.0"; sha256="1ls3x3v0wmddfy7ii7509cglb28l1ix1zaicdc6mhwin0rpp2rx3"; depends=[lattice latticeExtra]; }; DCODE = derive2 { name="DCODE"; version="1.0"; sha256="19dwms88q0ylxd92l3ivig8p8jjyhk8mhgz0l36m9pcq11gyjc0n"; depends=[seqinr]; }; DCPO = derive2 { name="DCPO"; version="0.5.3"; sha256="1h14xnii6kv6sc7pfxalif3bj0mifnxg46x4lwbixx9vzxxz96sq"; depends=[beepr BH dplyr forcats janitor purrr Rcpp RcppEigen rstan rstantools StanHeaders tibble tidyr]; }; DCchoice = derive2 { name="DCchoice"; version="0.0.17"; sha256="0bhnhrwq54kksaqazz18hsy2x63876rj02d1q62by6vpxb5k0k9w"; depends=[Formula interval MASS]; }; - DChaos = derive2 { name="DChaos"; version="0.1-5"; sha256="0dzwyqncv5cb8qr0bwpy91ijbz8yamlhnhxwpc4wpiffzhf2d4hq"; depends=[nnet outliers pracma sandwich xts zoo]; }; + DChaos = derive2 { name="DChaos"; version="0.1-6"; sha256="0g1ld6big26gpj4p6dz0ncchqyspb73a8wd6h900b98hg32zidg6"; depends=[nnet outliers pracma sandwich xts zoo]; }; DCluster = derive2 { name="DCluster"; version="0.2-7"; sha256="008nyry64s5g80narcc58273v0jhqzfgwynka6mh7jgi7qsqnxjd"; depends=[boot MASS spdep]; }; DClusterm = derive2 { name="DClusterm"; version="1.0-1"; sha256="04i9fyph2k3ffds0nv49371p8lw6dkzcf27pc98f99x0l6c8k5iq"; depends=[DCluster lme4 sp spacetime xts]; }; - DDD = derive2 { name="DDD"; version="4.4"; sha256="133qkwl9f9rsqmcmdmsr4i88568w8bvla9naw7vhj794i1r5vqka"; depends=[ape deSolve expm Matrix phytools SparseM subplex]; }; + DDD = derive2 { name="DDD"; version="4.4.1"; sha256="0ks0ybk3shnqjyzk304nm2jdhqkdzshbg0qyrhn93ajbaw6dm34b"; depends=[ape deSolve expm Matrix phytools SparseM subplex]; }; DDHFm = derive2 { name="DDHFm"; version="1.1.2"; sha256="0lgh6kcfas06p2yy7zy21r05k5521xbj5af3wwwssp5li1cia35g"; depends=[lokern wavethresh]; }; - DDIwR = derive2 { name="DDIwR"; version="0.4"; sha256="0z994anrw746iy83503bah2n39rd7qvx4spxn4qwhxhxbjp4gkfw"; depends=[admisc haven readr tibble xml2]; }; + DDIwR = derive2 { name="DDIwR"; version="0.5"; sha256="0q4dyyzpqj2a63yccal8nwvg176b7dv8phnhqnb2rppdgkikxdfh"; depends=[admisc haven readr tibble xml2]; }; DDM = derive2 { name="DDM"; version="1.0-0"; sha256="19g06qk3lzasj294x9wfij729mlq6ryvjqkn3rgl5xp1w0gx9wi2"; depends=[]; }; - DDPNA = derive2 { name="DDPNA"; version="0.2.6"; sha256="0ygyyxhhggyrllgzgmyxk4g1syz9qkp2rsawjgb8cz6w8nr06saq"; depends=[ggalt ggplot2 Hmisc igraph MEGENA plyr scales VennDiagram]; }; + DDPNA = derive2 { name="DDPNA"; version="0.2.7"; sha256="18s6g1r52gjk20yyqfx01nmh98zswpc6lwhg5w3rnhf9fj7310zg"; depends=[ggalt ggplot2 Hmisc igraph MEGENA plyr scales VennDiagram]; }; DDRTree = derive2 { name="DDRTree"; version="0.1.5"; sha256="16s5fjw7kwlxhrkzdny62sx32fvmg3rxjc3wrh6krd31jh1fqlfk"; depends=[BH irlba Rcpp RcppEigen]; }; DDoutlier = derive2 { name="DDoutlier"; version="0.1.0"; sha256="1az5zq0l3kj959572mlpc4zl73f16iag0yrs217fa9m8xpd3c2sd"; depends=[dbscan pracma proxy]; }; DECIDE = derive2 { name="DECIDE"; version="1.2"; sha256="18kn2pm9r0ims2k1jfsfzh258wwxz0xg86rsbwgq6szh0azlq3qy"; depends=[]; }; DEEPR = derive2 { name="DEEPR"; version="0.1"; sha256="0q8970q3gpjxwxdf2bkhpnqrxpm00w27b20a9sn9vv314rn1n7s8"; depends=[dirmult]; }; DEEVD = derive2 { name="DEEVD"; version="1.2.1"; sha256="0r8ymkwqjxjh49bh463f6wgdx22m420y0lkbgdwkbnzfgp5jmaar"; depends=[evd]; }; - DELTD = derive2 { name="DELTD"; version="2.6.6"; sha256="1slhxclan82sqxi6zyd07z4iapf8p68hrqk4ssr7csr4ffxbp2y9"; depends=[]; }; + DELTD = derive2 { name="DELTD"; version="2.6.7"; sha256="1cghz224pmh06yk00jx956nlkk45p2ri81v1jjhx27xjagp4jzcs"; depends=[]; }; DEMOVA = derive2 { name="DEMOVA"; version="1.0"; sha256="09dqhhhihphhdnplmhdq4q5zwc0qvqhirdrxa9x6fr43vwa5zfp4"; depends=[leaps]; }; - DEPONS2R = derive2 { name="DEPONS2R"; version="1.0.0"; sha256="17iw3cy5hypp0x43x0wwq7mfajbkz4q55bwj7c8pqnfma59vslb8"; depends=[raster sp xml2]; }; + DEPONS2R = derive2 { name="DEPONS2R"; version="1.0.3"; sha256="1h7bia4l8myjnwhjp576v6wkr0p63hcgfdmqrxhiam9xwl7kp4ar"; depends=[jsonlite raster rgdal rgeos sp xml2]; }; DES = derive2 { name="DES"; version="1.0.0"; sha256="16p38i8ykwc8gjw6c9dhdwjjpa1b17n9wqhz3rhkbzjh978pky31"; depends=[]; }; DESnowball = derive2 { name="DESnowball"; version="1.0"; sha256="012kdnxmzap6afc3ffkcvk1mazlkp286av6g9fwz2wcbf5mh9n1m"; depends=[clue cluster combinat MASS]; }; - DET = derive2 { name="DET"; version="2.0.2"; sha256="01vyb3mv4g7zpk7cn44i4069ndk9sn9qqs9k52clqbnf1kl1ynbx"; depends=[doParallel pROC]; }; + DET = derive2 { name="DET"; version="3.0.1"; sha256="0r2q1r4wc4nhhrr9bllxsp2w6ajja61mh34dyijjsfchx4025ljb"; depends=[doParallel pROC]; }; DEoptim = derive2 { name="DEoptim"; version="2.2-5"; sha256="0nlm2gdvd33yrwambmlrgj76inxz2a65ya7727l98fd4skfdw4mf"; depends=[]; }; DEoptimR = derive2 { name="DEoptimR"; version="1.0-8"; sha256="1vz546hyjyhly70z62h5n3mn62b8llhhmim8ffp9y6jnnb0i2sc4"; depends=[]; }; DEploid = derive2 { name="DEploid"; version="0.5.3"; sha256="0k5bcpfwf9fhkv0wp6s1nvp4l6xgwmdbz3l8mmiy8q1ym7gpvwml"; depends=[htmlwidgets magrittr plotly Rcpp rmarkdown scales]; }; @@ -984,10 +1009,11 @@ in with self; { DFA_CANCOR = derive2 { name="DFA.CANCOR"; version="0.2.0"; sha256="1kfnqg281cdws7gqn5s0klcvdc505d0y1chab2925wdihib7m2w4"; depends=[MASS MVN]; }; DFIT = derive2 { name="DFIT"; version="1.0-3"; sha256="1h0wvcplb7j7dqz9hkaw30x92ngxzkdvkwpg0142hrqb201zfrac"; depends=[ggplot2 mvtnorm simex]; }; DGCA = derive2 { name="DGCA"; version="1.0.2"; sha256="0k2a24ycagyxdx54dh9w8km25xhmmmhyyl26g76z4g5gqvcw092k"; depends=[matrixStats WGCNA]; }; - DGEobj = derive2 { name="DGEobj"; version="1.0.1"; sha256="0fvjlb45fx44dqz1njsxdgiiwcmvi7ifzywbrxbvrx0ar7c4yd0m"; depends=[assertthat GenomicRanges magrittr stringr]; }; + DGEobj = derive2 { name="DGEobj"; version="1.0.3"; sha256="0n2i6y2vhhypn3sgsysvfpxdfvhb3fq7pz2lv71bnn1fz3lghbsx"; depends=[assertthat GenomicRanges magrittr stringr]; }; + DGEobj_utils = derive2 { name="DGEobj.utils"; version="1.0.3"; sha256="03h4ywzlidy0jzxxwgkzahz99856lhv25y9mvgsb0alh20c8x81j"; depends=[assertthat DGEobj dplyr edgeR IHW limma qvalue RNASeqPower statmod stringr sva tidyr zFPKM]; }; DGLMExtPois = derive2 { name="DGLMExtPois"; version="0.1.3"; sha256="1prsnkkhb61y01flxz57875a9arvyy2qxjl0lz5ajpmf8dhr08j8"; depends=[COMPoissonReg nloptr progress]; }; DGVM3D = derive2 { name="DGVM3D"; version="1.0.0"; sha256="17cxv8rm7kmxms7v7hzbwbdwa3xl1hwgiljf97ppwswglqyik9iv"; depends=[rgl]; }; - DHARMa = derive2 { name="DHARMa"; version="0.3.3.0"; sha256="125wmcsnjp8h6bpqk812rysb6yv6ib5jyzf703l3q54bm0g2ww99"; depends=[ape doParallel foreach gap glmmTMB lme4 lmtest MASS mgcv qgam sfsmisc]; }; + DHARMa = derive2 { name="DHARMa"; version="0.4.1"; sha256="1dqcq9hh7l61ym7354wz6vva6aymx37cp9z77ypn7n6lfj0w0cgh"; depends=[ape doParallel foreach gap lme4 lmtest qgam]; }; DHBins = derive2 { name="DHBins"; version="1.1"; sha256="1g69acac7pxw8x0d9czyds7xljhbv9d686c99a3y8b4vh7dnx62s"; depends=[ggplot2]; }; DHS_rates = derive2 { name="DHS.rates"; version="0.8.0"; sha256="1mq4hqkghp6nk7jjwp9hfd81mjxrnkl4dvafd0vgav4yb8mhq8c2"; depends=[crayon dplyr haven matrixStats reshape rlang survey]; }; DICOMread = derive2 { name="DICOMread"; version="0.0.0.2"; sha256="0b78057did8ww4hyfy33ly6b9f7lzpiwjzdm7mjfd4gkfilmvh0j"; depends=[matlabr]; }; @@ -995,32 +1021,36 @@ in with self; { DIFboost = derive2 { name="DIFboost"; version="0.3"; sha256="07x31ccy2l0drv1356g1v4jw71i7zqb3d0v856gsd3kpqhclpvx0"; depends=[mboost penalized stabs]; }; DIFlasso = derive2 { name="DIFlasso"; version="1.0-4"; sha256="13ls5018l790cdr26431li4gi9zw03ilypszfqglg4hj485h7dyw"; depends=[grplasso miscTools penalized]; }; DIFplus = derive2 { name="DIFplus"; version="1.1"; sha256="1k03lr437gx5y762z3h40hz9kcl4m8xgrndxvbyvsgmn2h6pbwsd"; depends=[plyr TestDataImputation]; }; + DIFshiny = derive2 { name="DIFshiny"; version="0.1.0"; sha256="0lb98dj2kidfv8zqs1rdkj7b6gf6i4d2s904bwsbyg7w03jxm86f"; depends=[difR readxl shiny shinydashboard]; }; DIFtree = derive2 { name="DIFtree"; version="3.1.6"; sha256="1ps3nb1a5dgxs187bcjsys4fpi0z4z6d84qlxg8rf1rvcfgg21r5"; depends=[gridBase penalized plotrix VGAM]; }; DIME = derive2 { name="DIME"; version="1.2"; sha256="11l6mk6i3kqphrnq4iwk4b0ridbbpg2pr4pyqaqbsb06ng899xw0"; depends=[]; }; - DIMORA = derive2 { name="DIMORA"; version="0.1.0"; sha256="0qcy2pqpx7za4ckf6wvmbhz5a52j44ksn81f8j1lj0z90idj6psn"; depends=[minpack_lm numDeriv]; }; + DIMORA = derive2 { name="DIMORA"; version="0.2.0"; sha256="1ig2h2v199r5ryia35fx2540px7n2qshpma73599l82dr7k9hb33"; depends=[deSolve forecast minpack_lm numDeriv reshape2]; }; DIRECT = derive2 { name="DIRECT"; version="1.0.1"; sha256="00z4xlc9kxn19lw2b8xq6krsf5v3wfbr1ghl5ah5shr9dnv84lc1"; depends=[]; }; DISTRIB = derive2 { name="DISTRIB"; version="1.0"; sha256="0whwmmdx2k2vrjjkz4ww9v7z9ad3835819pby91119lyic27w727"; depends=[]; }; - DIZutils = derive2 { name="DIZutils"; version="0.0.6"; sha256="1h53wvbzgbqkyxjblcba4g6fiimyppgan19jlw9gn26qvrs62prs"; depends=[config data_table DBI RJDBC RPostgres shiny shinyjs]; }; + DIZutils = derive2 { name="DIZutils"; version="0.0.7"; sha256="03q3cnsska9dhskjnv090vczlnxhwh73ghjwp2pwb1pfbba71vxd"; depends=[config data_table DBI Hmisc psych rapportools RJDBC RJSONIO RPostgres shiny shinyjs xml2]; }; DIconvex = derive2 { name="DIconvex"; version="1.0.0"; sha256="0bnrq9nmryshir6ll43nz20aaqmmw0zjvfml72cpwbvrma8a3qmz"; depends=[lpSolveAPI]; }; DImodels = derive2 { name="DImodels"; version="1.0"; sha256="1kgnfcw386x19vmzhhir907rjvfz15rlrs6xa8ph2w95j5ai4pf0"; depends=[hnp rootSolve]; }; - DIscBIO = derive2 { name="DIscBIO"; version="1.1.0"; sha256="01v90gy9c9rfynfxjw96icshg6ndj88kifx17m40s98kx67q5iiz"; depends=[AnnotationDbi boot cluster fpc ggplot2 httr igraph impute mclust NetIndices org_Hs_eg_db philentropy png RColorBrewer readr rpart rpart_plot RWeka SingleCellExperiment statmod TSCAN tsne]; }; + DIscBIO = derive2 { name="DIscBIO"; version="1.2.0"; sha256="1m1c9ivblk3sir6lfq0msx2vlrx37dd5v7y6003k6fmsgrfpi9fs"; depends=[AnnotationDbi boot cluster fpc ggplot2 httr igraph impute mclust NetIndices org_Hs_eg_db philentropy png RColorBrewer rpart rpart_plot RWeka SingleCellExperiment statmod TSCAN tsne]; }; DJL = derive2 { name="DJL"; version="3.6"; sha256="1drfqzla0lqlch21bvyjq5qjwm75c6rggpsc92p4dw5vwzs3p8lj"; depends=[car lpSolveAPI]; }; DLASSO = derive2 { name="DLASSO"; version="2.0.2"; sha256="0xdygf6h89d9z4kqb46iqfxgdzq9dmkrxf9ypw78l4d8n9xx2gaa"; depends=[MASS]; }; - DLMtool = derive2 { name="DLMtool"; version="5.4.5"; sha256="1ngvdi88n2qkfr24wqvla0ghwiqhlz66qn9mry9xra8js6c8camw"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo snowfall]; }; - DMCfun = derive2 { name="DMCfun"; version="1.1.0"; sha256="05f0m82cxdpi5lj34h9aiaf2h3shahgf3w0ac4w81y122ikqdl70"; depends=[BH DEoptim dplyr optimr pbapply Rcpp tidyr]; }; + DLMtool = derive2 { name="DLMtool"; version="6.0.1"; sha256="1ycphavrbr8x1r6ipdjl4nhr0i4sii55cmn0kmjmv4b9lh93vj01"; depends=[dplyr ggplot2 MSEtool Rcpp]; }; + DMCfun = derive2 { name="DMCfun"; version="1.3.0"; sha256="1ryj8djbd2vw046jjd6anva6l0jk73ip46l17bqxfmmgq4ryd99c"; depends=[BH DEoptim dplyr optimr pbapply Rcpp tidyr]; }; + DMLLZU = derive2 { name="DMLLZU"; version="0.1.0"; sha256="13lsdv2q0l7y9pddg23x6ihlgp032jjaxbhv2js5fnbx96nnarw3"; depends=[caret gbm ISLR lmtest nnet randomForest rlang sandwich]; }; DMMF = derive2 { name="DMMF"; version="0.5.1.2"; sha256="0p82cfp0561j4ki20rznx46z7vqdxh128a0m0zj8d2wp3csn1aag"; depends=[raster rgdal sp]; }; DMRMark = derive2 { name="DMRMark"; version="1.1.1"; sha256="15wr6j0v9kvbv8y6flkp4svfqy059ziv89nxv91vp0pjmavhpdlz"; depends=[ellipse MCMCpack mvtnorm]; }; DMRnet = derive2 { name="DMRnet"; version="0.2.0"; sha256="1rbba8w4li240gw5z675d7skm72rh0zxzp4rhsn6ivj72jya7jw4"; depends=[glmnet grpreg]; }; - DMwR = derive2 { name="DMwR"; version="0.4.1"; sha256="1qrykl9zdvgm4c801iix5rxmhk9vbwnrq9cnc58ms5jf34hnmbcf"; depends=[abind class lattice quantmod ROCR rpart xts zoo]; }; + DMTL = derive2 { name="DMTL"; version="0.1.2"; sha256="0z6l1sylw4ib1mgqjnrmxh2q56vazg2i7xxiw1g4gm28iq44r2n0"; depends=[caret glmnet kernlab ks randomForest]; }; DMwR2 = derive2 { name="DMwR2"; version="0.0.2"; sha256="1vzfbz2k05j8r2hpig3d2grb99rnnh2s1sviii3prcyqicxfh0i9"; depends=[class DBI dplyr quantmod readr rpart xts zoo]; }; DNAseqtest = derive2 { name="DNAseqtest"; version="1.0"; sha256="1mpmf40vrpw8m75rlqchsnyrz12pgg5bkz7wfca5yy5sbbiwk5pf"; depends=[]; }; DNAtools = derive2 { name="DNAtools"; version="0.2-3"; sha256="10j95g9jqr7jk9ph9j3i2yblkmp4v4py8vq70rv7q56cv7dq7z32"; depends=[multicool Rcpp RcppParallel RcppProgress Rsolnp]; }; DNLC = derive2 { name="DNLC"; version="1.0.0"; sha256="05410xgpfjsydjmnzry454qcjpws9vhh252q2xq7l0scdj87ly00"; depends=[caTools fdrtool GOstats igraph locfdr mvtnorm spdep]; }; DNMF = derive2 { name="DNMF"; version="1.3"; sha256="09yp6x6vd44ahklcag96fpjgyphyn45rkqkbwr1n36a2d8vxk9nc"; depends=[doParallel foreach gplots Matrix]; }; DOBAD = derive2 { name="DOBAD"; version="1.0.6"; sha256="0ifrrfm4yp1416z58qgnak042rgj1xvqby2vvzgrv19z6b3250p3"; depends=[lattice Matrix numDeriv]; }; + DOPE = derive2 { name="DOPE"; version="1.0.4"; sha256="1wacgv7iid141n0g40cpph09zjqdccyfsxrc1pjyrwqjrr464fc5"; depends=[dplyr]; }; DOS = derive2 { name="DOS"; version="1.0.0"; sha256="0vvkwn4wfvspbk74nb6124hdx9158h6yfksib14xqq7rx7c97ad4"; depends=[MASS]; }; DOS2 = derive2 { name="DOS2"; version="0.5.2"; sha256="0lcqk2fxfl5pdnxlpppqiqnyc23jyhp1kcxwci8ilagjv4djipmw"; depends=[MASS sensitivity2x2xk sensitivitymult sensitivitymv senstrat]; }; DOT = derive2 { name="DOT"; version="0.1"; sha256="0qh5n57cp9c2n5yn59q4wggz82943pwfanp3kx869aba2x3sj30i"; depends=[V8]; }; + DOVE = derive2 { name="DOVE"; version="1.5"; sha256="0ra0xak10zhdnmv3qs9lacdmq5hgi8cy4h06zr0wlfpyqg8xwwzp"; depends=[survival]; }; DOvalidation = derive2 { name="DOvalidation"; version="1.1.0"; sha256="1mzws3w7djpxnfqxjcqwgia7p17kb0qlnzj6qcfg2m1vamb1cn2z"; depends=[]; }; DPBBM = derive2 { name="DPBBM"; version="0.2.5"; sha256="1qypxrcm3sb727lqb09ssjf3hblixqayw3qsyql01imrxwm609i2"; depends=[CEoptim gplots tmvtnorm VGAM]; }; DPP = derive2 { name="DPP"; version="0.1.2"; sha256="1qalcm4gwh03qpy07d0p323ccq8xmk04v6z30g7wg6ic613bqg7m"; depends=[coda Rcpp]; }; @@ -1029,33 +1059,34 @@ in with self; { DPWeibull = derive2 { name="DPWeibull"; version="1.7"; sha256="1z261fhx5dr3yxfy10jrnj5xpc5i8bcs169wqp9p32frwpz20ad3"; depends=[binaryLogic prodlim Rcpp RcppArmadillo survival truncdist]; }; DPtree = derive2 { name="DPtree"; version="1.0.1"; sha256="0d7zf695lwkx4gv50f08cbi3p3mjjay0qgrbmvybf9m15i4zmyd7"; depends=[MASS MCMCpack plyr Rdpack]; }; DRAYL = derive2 { name="DRAYL"; version="1.0"; sha256="0cf5pyx6nwh8srdylpnmymv3dr67fm6qqpwd1hvj1wmyfc8fznpp"; depends=[cubature pracma RConics rmutil]; }; - DRDID = derive2 { name="DRDID"; version="1.0.0"; sha256="0fb23sn8v0y35czmg3hh8qff2w329k2aw00q3paxm3sas6ih72rz"; depends=[BMisc trust]; }; + DRDID = derive2 { name="DRDID"; version="1.0.1"; sha256="10n0vcj0lcg0xypqmlbsws069xbgbxpgkc7kxbis04ksq7h43d5z"; depends=[BMisc trust]; }; DREGAR = derive2 { name="DREGAR"; version="0.1.3.0"; sha256="15cplshs85r0z659mc7xmj5db7vc95wxs01c34isc22p8z0a287i"; depends=[msgps]; }; - DRHotNet = derive2 { name="DRHotNet"; version="1.2"; sha256="0qvxxqcixzxg6gxgnafgfxwpy5haxgh4nbj9axk3kb9gn3b5g6mq"; depends=[maptools PBSmapping raster sp spatstat spdep]; }; + DRHotNet = derive2 { name="DRHotNet"; version="1.3"; sha256="1hfg7dh37lpar4byqxhjkpv8w18iy2rgpjqb312v3k9cdb4g8qi2"; depends=[maptools PBSmapping raster sp spatstat spatstat_core spatstat_geom spatstat_linnet spdep]; }; DRIP = derive2 { name="DRIP"; version="1.6"; sha256="08qyv2xwl3a70jrpmyxq37g0cryzc0ca904znyhzidmjgy13d18i"; depends=[]; }; DRR = derive2 { name="DRR"; version="0.0.4"; sha256="1y70si1gig4l7jx5jiqsqliyywfsvimkx53x3zh1lc3yj2j6bqwk"; depends=[CVST kernlab Matrix]; }; DRaWR = derive2 { name="DRaWR"; version="1.0.1"; sha256="1pfdczwzd236c64yw94bgbk0hbl4dhlgjfjwkljmqgqrzsddvgqh"; depends=[Matrix ROCR]; }; - DRomics = derive2 { name="DRomics"; version="2.1-3"; sha256="0cr24wajnd19xfp0abiga2znks0alynvp768jj04iqk13q8wwv0i"; depends=[DESeq2 ggplot2 limma SummarizedExperiment]; }; - DSAIDE = derive2 { name="DSAIDE"; version="0.8.3"; sha256="0n1ffv48202pnnsdcd3zpgpviy8613fcgx5c796whjffrc4v8m31"; depends=[adaptivetau deSolve dplyr ggplot2 gridExtra lhs nloptr plotly shiny XML]; }; - DSAIRM = derive2 { name="DSAIRM"; version="0.8.6"; sha256="1c43k56ly4bdfv6drd3zj9dgxg77dy3h36ya2znk2xgkq03smh4y"; depends=[adaptivetau boot deSolve dplyr ggplot2 gridExtra lhs nloptr plotly rlang shiny tidyr XML]; }; + DRomics = derive2 { name="DRomics"; version="2.2-0"; sha256="10n55vxjjx52r22lmf1bfblzdrbsbccwwpqqx3p6l02fi6h7fd20"; depends=[DESeq2 ggplot2 limma SummarizedExperiment]; }; + DSAIDE = derive2 { name="DSAIDE"; version="0.9.1"; sha256="01p65mldayklj6yq7l2wsh7apxa88403mv4k4dlziykkwdxij7m3"; depends=[adaptivetau deSolve dplyr ggplot2 gridExtra lhs nloptr plotly rlang shiny XML]; }; + DSAIRM = derive2 { name="DSAIRM"; version="0.8.7"; sha256="1rrawf0sr3parl5h2a8pvji2kyj51dnsmgm2xz667nqi24zzws1k"; depends=[adaptivetau boot deSolve dplyr ggplot2 gridExtra lhs nloptr plotly rlang shiny XML]; }; DSBayes = derive2 { name="DSBayes"; version="1.1"; sha256="0iv4l11dww45qg8x6xcf82f9rcz8bcb9w1mj7c7ha9glv5sfb25v"; depends=[BB]; }; - DSI = derive2 { name="DSI"; version="1.1.1"; sha256="0wn4vnn81kdp79nqycr0m8ljis78gagk3gnwn3r3xgiapg8xmh85"; depends=[progress R6]; }; + DSI = derive2 { name="DSI"; version="1.2.0"; sha256="04halpcrxpgmvgxw1szmxgr46b0i5wqhbphbr2a467p4612c65c3"; depends=[progress R6]; }; DSL = derive2 { name="DSL"; version="0.1-7"; sha256="05wj3zypr2kqfbka930qnwnk2r43pqi13pbs5n6lm8vdq4zjblw4"; depends=[]; }; - DSLite = derive2 { name="DSLite"; version="1.1.0"; sha256="16nd178lgx89i1qacv9xs8r127kxzchkn3757ps35anci50h8kbh"; depends=[DSI R6]; }; - DSMolgenisArmadillo = derive2 { name="DSMolgenisArmadillo"; version="1.3.4"; sha256="0xq7cfw94p0aikn4zh07rw3vv0mgbzc041m16qfzbjnk73rshzbx"; depends=[base64enc DSI httr MolgenisAuth stringr urltools]; }; - DSOpal = derive2 { name="DSOpal"; version="1.1.0"; sha256="0n0112alq946zm8am13v5p35kmkc57yfwcbc085sfydpmcwbsjnj"; depends=[DSI opalr]; }; + DSLite = derive2 { name="DSLite"; version="1.2.0"; sha256="1imbayqil8xj27aqpdzm0xjciwxflway9irwxsggzzhcmgwgygmp"; depends=[DSI R6]; }; + DSMolgenisArmadillo = derive2 { name="DSMolgenisArmadillo"; version="1.3.5"; sha256="14xk8i2z4qwrbdyb0nh69vzsyf17q5xzbqs9nqj38i4xsymxmzr6"; depends=[base64enc DSI httr MolgenisAuth stringr urltools]; }; + DSOpal = derive2 { name="DSOpal"; version="1.2.0"; sha256="1g3k1vf1qmb2pw3n9693r9mbhblnyj7a85dgkxqnqaiyl0jvgz0f"; depends=[DSI opalr]; }; DSSAT = derive2 { name="DSSAT"; version="0.0.2"; sha256="15v64cgbfi51kj3p2wjmir8cfznhilx4gsd5w24734lwblmqf1bm"; depends=[dplyr glue lubridate purrr readr rlang stringr tidyr]; }; + DSWE = derive2 { name="DSWE"; version="1.5.1"; sha256="129dx5sf938pqpbqbar6zwma58m59if45pp7x6zwvnh2n03gaxy8"; depends=[BayesTree e1071 FNN gss KernSmooth matrixStats mixtools Rcpp RcppArmadillo]; }; DSjobtracker = derive2 { name="DSjobtracker"; version="0.1.1"; sha256="1vi07n7ygsdjj4830rnx7kvacmnizl146c6bfw2fnby47apg38f9"; depends=[]; }; - DSpat = derive2 { name="DSpat"; version="0.1.6"; sha256="1v6dahrp8q7fx0yrwgh6lk3ll2l8lzy146r28vkhz08ab8hiw431"; depends=[mgcv RandomFields rgeos sp spatstat]; }; DSpoty = derive2 { name="DSpoty"; version="0.1.0"; sha256="18z8gk3zj7k2szxg9579qy5klrqjw6zsk5x9jmwrv4qhb98fyji6"; depends=[dplyr httr purrr stringr]; }; DSsim = derive2 { name="DSsim"; version="1.1.5"; sha256="0dr8dc91m7s5c198k9cb26a09f14wb8ihr46c0mr9cg33l2wf3nv"; depends=[fields mgcv mrds rgeos shapefiles sp splancs]; }; DStree = derive2 { name="DStree"; version="1.0"; sha256="14wba25ylmsyrndh007kl377dv4r34wr1555yxl6kyxrs4yg3jir"; depends=[Ecdat pec Rcpp rpart rpart_plot survival]; }; DSviaDRM = derive2 { name="DSviaDRM"; version="1.0"; sha256="1hj2pgnldrpgapwwz1kf4k6mvyzwdvb1i6czd7sbimsx5hafwps8"; depends=[igraph ppcor]; }; - DT = derive2 { name="DT"; version="0.16"; sha256="0in4d34nxb4pk2jygj0a21cqf0k0m4dhm4rjv68bnkp5kmmz6kbk"; depends=[crosstalk htmltools htmlwidgets jsonlite magrittr promises]; }; + DT = derive2 { name="DT"; version="0.18"; sha256="1vxqmj01504k9639m2cig1s4qflz3dj54h9rgx5qa72fpkvkk411"; depends=[crosstalk htmltools htmlwidgets jsonlite magrittr promises]; }; DTAT = derive2 { name="DTAT"; version="0.3-4"; sha256="1ddmih8cxbgc1p4m0sm8gdbnf0d3ka8z7014zd4aykz75j3pr002"; depends=[data_table dplyr Hmisc jsonlite km_ci pomp r2d3 shiny survival]; }; DTAXG = derive2 { name="DTAXG"; version="0.1.0"; sha256="1jxa0ix0z35i0xdnjl698j8iqjmp6nz8ckah9bap5ay9rkq0xd7f"; depends=[]; }; + DTAplots = derive2 { name="DTAplots"; version="1.0.2.4"; sha256="12pdm3g7jxbq2pjvxiz5z3fs0k1g45lwcfqm1h42lxqyzafxswph"; depends=[]; }; DTComPair = derive2 { name="DTComPair"; version="1.0.3"; sha256="1af2293ckkpz0gjcibgzzvz37852cav4wa4girpc87yn3p4ajlri"; depends=[gee PropCIs]; }; - DTDA = derive2 { name="DTDA"; version="2.1-2"; sha256="1nc4j6pzbk5g967k9vh06v8gfr88h611fw6zbvrp2iy6z22arpgf"; depends=[]; }; + DTDA = derive2 { name="DTDA"; version="3.0"; sha256="1agra6qsdqxjra8kdw5y1ya2l32xrg11py5sr18ddyf3gp5g3w98"; depends=[doParallel foreach]; }; DTDA_cif = derive2 { name="DTDA.cif"; version="1.0.2"; sha256="12vkhqxdhir06s35kr76dwns9m02wyicz3mv4r56fqglsfyw77xr"; depends=[doParallel foreach Rcpp]; }; DTDA_ni = derive2 { name="DTDA.ni"; version="1.0"; sha256="0c45cz4y629bc0jnf3m35ywqkrnjcdqbssbb6m10j8b4gszdi35i"; depends=[]; }; DTK = derive2 { name="DTK"; version="3.5"; sha256="0nxcvx25by2nfi47samzpfrd65qpgvcgd5hnq9psx83gv502g55l"; depends=[]; }; @@ -1066,7 +1097,9 @@ in with self; { DTSg = derive2 { name="DTSg"; version="0.7.0"; sha256="0fqvpffjkkfs8wdv12wi0bp9h02vq2lqn41z29283s0dp8gn6p7l"; depends=[checkmate data_table R6]; }; DTWBI = derive2 { name="DTWBI"; version="1.1"; sha256="06lp4yc5nhacrgic78l014g2w1ibwgs8dp8zrahk5aripaczl25y"; depends=[dtw e1071 entropy lsa rlist]; }; DTWUMI = derive2 { name="DTWUMI"; version="1.0"; sha256="0pybgbfs2yp2ljbs0kra5z70x3llkiwdngp6cadgs3j9rar4vq4q"; depends=[dtw DTWBI e1071 entropy lsa rlist]; }; - DVHmetrics = derive2 { name="DVHmetrics"; version="0.3.10"; sha256="1d8zig3ljld05pwaqsahyvjf95y8k183al5ibx09h6hj3r5bfd8n"; depends=[DT ggplot2 KernSmooth reshape2 shiny]; }; + DTwrappers = derive2 { name="DTwrappers"; version="0.0.1"; sha256="022vwi7ygjfa7j8p204l8y70spwd6f72hqqbhdiprahl36bhxbhy"; depends=[data_table]; }; + DUBStepR = derive2 { name="DUBStepR"; version="1.1.1"; sha256="0jvgm9cr868ry399rzh1gj2qp3qaypgvci6akkk1clv6hkmbzlib"; depends=[Matrix matrixcalc qlcMatrix RANN Seurat]; }; + DVHmetrics = derive2 { name="DVHmetrics"; version="0.4.1"; sha256="1c98847b5pgmhcszdnllpg3iq88693xjss2nxgr9dya52x1kbyaj"; depends=[DT ggplot2 KernSmooth reshape2 shiny]; }; DWBmodelUN = derive2 { name="DWBmodelUN"; version="1.0.0"; sha256="1m71fx9l2rq27d2q5hiqxiyljvf5wjcfkcblqw19rpiixrinv4va"; depends=[dygraphs htmltools ncdf4 raster rgdal]; }; DWDLargeR = derive2 { name="DWDLargeR"; version="0.1-0"; sha256="1bxdvgj38xv2xj98njpyhy12b54nccwnc3v92kkpd3i7nwbw48dy"; depends=[Matrix SparseM]; }; DWLasso = derive2 { name="DWLasso"; version="1.1"; sha256="1i8j8wjfvg69ldr8ahz1zv3m2wgxd701iph94ad22zs9qwqfg16z"; depends=[glmnet hglasso Matrix]; }; @@ -1086,20 +1119,19 @@ in with self; { DataExplorer = derive2 { name="DataExplorer"; version="0.8.2"; sha256="0451fnlaqvyzpqhn25g6lj2svjfsfaxii9vmwhqw7p29fl71zaln"; depends=[data_table ggplot2 gridExtra networkD3 reshape2 rmarkdown scales]; }; DataGraph = derive2 { name="DataGraph"; version="1.2.1"; sha256="164wbh3by8qf0p84l5v7vwrzf0f2s305fwmrl01khcll8pk34xlm"; depends=[Rcpp]; }; DataLoader = derive2 { name="DataLoader"; version="1.3"; sha256="18mih6mb95v5xjvmqwby2mma74fcxwyqdm5w8j3bhi4iwgfn6d7v"; depends=[plyr rChoiceDialogs readxl xlsx]; }; + DataPackageR = derive2 { name="DataPackageR"; version="0.15.8"; sha256="0jrla69v47nycrqb4lccw2s2qabk2l9nm4sgwd1lfpq1zl8b3jwg"; depends=[assertthat crayon desc devtools digest futile_logger knitr purrr rmarkdown roxygen2 rprojroot stringr usethis yaml]; }; DataSpaceR = derive2 { name="DataSpaceR"; version="0.7.4"; sha256="1sag3mzwx6sb7xjg3xbid9487bgs2rl3xm3qyz1zzd8qm58s3h55"; depends=[assertthat curl data_table digest httr jsonlite R6 Rlabkey]; }; - DataVisualizations = derive2 { name="DataVisualizations"; version="1.2.1"; sha256="1mnc8klc47fqlglim4y33aqqii8bd58g3csa7635l0khx45qjx99"; depends=[ggplot2 Rcpp RcppArmadillo sp]; }; + DataVisualizations = derive2 { name="DataVisualizations"; version="1.2.2"; sha256="1fqsim2kz57f4c9isj6pivxnsabhdpj17dpyly4d4jh5bgyscqzm"; depends=[ggplot2 pracma Rcpp RcppArmadillo reshape2 sp]; }; DataViz = derive2 { name="DataViz"; version="0.2.8"; sha256="1dr5nvdzc63x9ymlysvv5i8b7zcffq13pa39q0ychdwr1s3x7vzw"; depends=[Rcpp tibble]; }; - DatabaseConnector = derive2 { name="DatabaseConnector"; version="3.0.0"; sha256="01a4xx7wdfmpvbq2ywdjg7pc90a2xa1rf3ka8vm4xbz31ir066y5"; depends=[DatabaseConnectorJars DBI rJava SqlRender stringr urltools]; }; + DatabaseConnector = derive2 { name="DatabaseConnector"; version="4.0.2"; sha256="10ln53hfgkd3janlk11s3mi99r69xaaz7p9lbsi6s83yhf4kgv3r"; depends=[bit64 DBI rJava rlang SqlRender stringr urltools]; }; DatabaseConnectorJars = derive2 { name="DatabaseConnectorJars"; version="1.1.0"; sha256="18m6ynj30r5xdy51b3s39h0jcz1k2wgka888skr6ds2233lhqk2w"; depends=[rJava]; }; - DatabionicSwarm = derive2 { name="DatabionicSwarm"; version="1.1.3"; sha256="1qjlczpxadvzjn4gl2q7rnmpgygsh8ylk8cfvmynx8p675g657cz"; depends=[deldir GeneralizedUmatrix Rcpp RcppArmadillo]; }; + DatabionicSwarm = derive2 { name="DatabionicSwarm"; version="1.1.5"; sha256="1m5ydlyj54ybw38b6i78krrvqj29bp24x19xbqz9fgwpqimnv79y"; depends=[deldir GeneralizedUmatrix Rcpp RcppArmadillo]; }; DatastreamDSWS2R = derive2 { name="DatastreamDSWS2R"; version="1.7.9"; sha256="01fc1rzcgfjlllimvq7va6gdmsavpckgyf4gk1vjd2lvnkf5z592"; depends=[dplyr foreach httr jsonlite stringi stringr xts zoo]; }; Davies = derive2 { name="Davies"; version="1.1-9"; sha256="19n2szki2dc8z01zh5a7bq4scgisnpd2qqbiimgrswjrykgh2fpm"; depends=[]; }; - DeCAFS = derive2 { name="DeCAFS"; version="3.1.5"; sha256="0f56xl4is1cknlg55s2vprcf8f41if1vn0hh4xxhpficc6pxmnbv"; depends=[ggplot2 Rcpp]; }; + DeCAFS = derive2 { name="DeCAFS"; version="3.2.3"; sha256="1sc9wx33lhdwp5ql4cq3jrqilrykhn44p9idccsn702pyf9xy4lq"; depends=[ggplot2 Rcpp robustbase]; }; DeLorean = derive2 { name="DeLorean"; version="1.5.0"; sha256="1ry6j4mvxms9hddi9c56p9yhjh66fzss41wqkf6xq398h1wbn4q1"; depends=[BH broom coda dplyr fastICA functional ggplot2 kernlab lattice MASS memoise Rcpp RcppEigen reshape2 rstan rstantools seriation StanHeaders stringr]; }; DeRezende_Ferreira = derive2 { name="DeRezende.Ferreira"; version="0.1.0"; sha256="05c99z3hlwwm0p02cl9z6gjwfxfq2b2qn90l85270bi16llgf42h"; depends=[xts]; }; - DealGPL570 = derive2 { name="DealGPL570"; version="0.2.0"; sha256="1c202gzbhqaisxvpiiajcbfsjnqrvygd19304m2n89ansv81vi8r"; depends=[affy dplyr GEOquery stringr tibble]; }; - DecisionAnalysis = derive2 { name="DecisionAnalysis"; version="1.1.0"; sha256="0vgvp1c6n8lmi48w1n5v86f8vrf7pf0dksb8wr3fxzg41nc9whrm"; depends=[Cairo data_tree DiagrammeR dplyr ggplot2 gridExtra qpdf tidyr viridisLite]; }; - DeclareDesign = derive2 { name="DeclareDesign"; version="0.24.0"; sha256="0gfxbnl1wnxqghljicrsvwhzkjp1al29rhfn8sjydyq006mv1yy8"; depends=[estimatr fabricatr generics randomizr rlang]; }; + DeclareDesign = derive2 { name="DeclareDesign"; version="0.26.0"; sha256="1k2g05a3q60jgcm9589lw4q1gxa9lpw1cgifdrayvw7ym1wwzxk9"; depends=[estimatr fabricatr generics randomizr rlang]; }; DecomposeR = derive2 { name="DecomposeR"; version="1.0.3"; sha256="19p3iqpjjbfqb2jgd4n443qi3ksjys426bg41ql4bfp3af0nfw4l"; depends=[colorRamps dplyr hexbin hht StratigrapheR]; }; DecorateR = derive2 { name="DecorateR"; version="0.1.2"; sha256="1za2qvdq96f75rmnm421xmq8s01ny4666ghv14i72iy3s4ml2hq9"; depends=[rJava RWeka RWekajars]; }; Deducer = derive2 { name="Deducer"; version="0.7-9"; sha256="14kakyf28i654pndlswjzp6h3h7szpznrg6xznqg150mmn0bs3s6"; depends=[car e1071 effects foreign ggplot2 JGR MASS multcomp plyr rJava scales]; }; @@ -1108,7 +1140,7 @@ in with self; { DeducerSpatial = derive2 { name="DeducerSpatial"; version="0.7"; sha256="0133qk3yjcifyha7c4pqr5s0hmbci72bzgil2r0sxjmrljs3q727"; depends=[Deducer Hmisc JavaGD maptools OpenStreetMap rgdal scales sp UScensus2010]; }; DeducerSurvival = derive2 { name="DeducerSurvival"; version="0.1-0"; sha256="03qk3y4pibvrxbnxbm5rlksw807dvbilip1jbpn1r7k02ibzq676"; depends=[Deducer]; }; DeducerText = derive2 { name="DeducerText"; version="0.1-2"; sha256="0if2p9j74wa5rva4iv0i8iax22grl9j7lqcqzqlywjgqwnlzxa05"; depends=[Deducer RColorBrewer SnowballC tm wordcloud]; }; - Delaporte = derive2 { name="Delaporte"; version="7.0.5"; sha256="1bph2ddvgmzcqvhj6s9rbwq58x0pczkjydfis96kv5zvsaca123x"; depends=[]; }; + Delaporte = derive2 { name="Delaporte"; version="8.0.1"; sha256="0ijhmwclpg5czs2sl2vykcw8qj2pxy26xf6knh62rqq6p6sm43f4"; depends=[]; }; DelayedEffect_Design = derive2 { name="DelayedEffect.Design"; version="0.0.4"; sha256="0n1dw9bqisfarg7him49mzqn60gcfr660d5x9k6b37r12dnmy48v"; depends=[msm survival]; }; Delta = derive2 { name="Delta"; version="0.2.0.3"; sha256="0bi9qca4ky481zycp8r7ihvqfjkpvi7hb9wrjsw9avawqa6ck9bv"; depends=[]; }; Demerelate = derive2 { name="Demerelate"; version="0.9-3"; sha256="1bsf09di6nh0hznqx829jnbn3092rya03hnc82cns6rm8d3bn0a9"; depends=[fts mlogit sfsmisc vegan]; }; @@ -1119,15 +1151,17 @@ in with self; { DengueRT = derive2 { name="DengueRT"; version="1.0.1"; sha256="11qfg4l6y3j8qh4dcsz13xjjj1n0q71c9a3c180nm5lgqv0nwb81"; depends=[drc ggplot2 nlme]; }; DensParcorr = derive2 { name="DensParcorr"; version="1.1"; sha256="1ifkg7cpimf27yhr60rks77r16kmhwa5h10wv7b64sbfncnyzfmj"; depends=[clime gplots]; }; Density_T_HoldOut = derive2 { name="Density.T.HoldOut"; version="2.00"; sha256="0kh5nns1kqyiqqfsgvxhx774i2mf4gcim8fp5jjyq577x4679r31"; depends=[histogram]; }; - DepLogo = derive2 { name="DepLogo"; version="1.0"; sha256="0h4jpflf8amip62r936lg0k428gypag296kwl58w1d0qa5jyxrkk"; depends=[]; }; + DepLogo = derive2 { name="DepLogo"; version="1.2"; sha256="13y3akmrj5x1mn1sgha1jryzswg4kqxwswbm3m5z92mcm2zw4r9l"; depends=[]; }; DepthProc = derive2 { name="DepthProc"; version="2.1.3"; sha256="1dq5y6fgmm00imkim4v2s6kn4z5qnwa0dkfkcq4pap7imvi35aab"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm zoo]; }; - Deriv = derive2 { name="Deriv"; version="4.1.2"; sha256="1j9sh1w9lsnnhlh59g4ghykyfx46rxh380s8imvm7pzna7rw7c64"; depends=[]; }; - DescTools = derive2 { name="DescTools"; version="0.99.39"; sha256="03yd43jnb6xb3mz57fpgw48hsbxcsj0k85w3aqy2335lprdhxy2k"; depends=[BH boot Exact expm gld MASS mvtnorm Rcpp rstudioapi]; }; - DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="1.8"; sha256="108f4p1iy2f2qpxwmsqvd9dxhaysvym40jdpzcmsagdrcgpwfh82"; depends=[DescTools foreign manipulate rstudioapi writexl]; }; - DescrTab2 = derive2 { name="DescrTab2"; version="2.0.3"; sha256="1dhni83jhl1v094l6axhaain67k307ba6cppzxmhn74ba5rikfcl"; depends=[cli DescTools dplyr exact2x2 flextable forcats kableExtra magrittr nlme officer rlang scales stringr tibble tidyselect]; }; + Deriv = derive2 { name="Deriv"; version="4.1.3"; sha256="130g3mv0z9sqs6y23a0a94512iiw05yr6fp378vhdxxbignzbnyv"; depends=[]; }; + DescTools = derive2 { name="DescTools"; version="0.99.41"; sha256="0875agn2yy4d5bdvz53nxd8lg2lnngnfv15s4cpdnzfkv0gjcf5i"; depends=[BH boot data_table Exact expm gld MASS mvtnorm Rcpp rstudioapi]; }; + DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="1.9"; sha256="12zwhy05wkwxldjyjxqcfsww73pxyni17c5g3b0slrxk6ag13wl7"; depends=[DescTools foreign manipulate rstudioapi writexl]; }; + DescrTab2 = derive2 { name="DescrTab2"; version="2.0.7"; sha256="1yknr146v7d6ahm7glarqzpk4z4nyg9mwmgnrsfszwwryzpck5ii"; depends=[cli DescTools dplyr exact2x2 flextable forcats kableExtra magrittr nlme officer rlang scales stringr tibble tidyselect]; }; DescribeDisplay = derive2 { name="DescribeDisplay"; version="0.2.7"; sha256="0241mbz0y3ala7fsb4fwjd0xigsk0wq77hfrjyvnnp97rfjfzmcv"; depends=[GGally ggplot2 plyr reshape2 scales]; }; DescriptiveStats_OBeu = derive2 { name="DescriptiveStats.OBeu"; version="1.3.2"; sha256="0f2inlfkwl2q9ll5lh0ynpsbf6zci149s5nj0s0x0g98z72z8mly"; depends=[dplyr jsonlite magrittr RCurl reshape]; }; - DesignLibrary = derive2 { name="DesignLibrary"; version="0.1.5.5"; sha256="1qr6abnyfgf71vcqirpwk4k8zsiddx4s5hd5cjin5jvgkp2q2fjy"; depends=[DeclareDesign estimatr fabricatr generics glue randomizr rlang]; }; + DescriptiveWH = derive2 { name="DescriptiveWH"; version="1.0.1"; sha256="14pmi8qcl09s7s3llyiwvzrv9ffmmkb7kipqcxvzsxwikhcimrl5"; depends=[]; }; + DesignCTPB = derive2 { name="DesignCTPB"; version="1.1.1"; sha256="0w2r4zrs2r7qlivrchbiy3yzmdhrbnx45kfsnwhg800dqxhg9biy"; depends=[fields magrittr mnormt plotly reticulate]; }; + DesignLibrary = derive2 { name="DesignLibrary"; version="0.1.6"; sha256="0y450r3mzhgmpdn0700k78msyyvv1si4z8r24xbp1qzhginkkr85"; depends=[DeclareDesign estimatr fabricatr generics glue randomizr rlang]; }; DetLifeInsurance = derive2 { name="DetLifeInsurance"; version="0.1.3"; sha256="15yh66mn84cm5ix99lg5lp783dp8il03dyirkhil7m5pwzss42r4"; depends=[]; }; DetMCD = derive2 { name="DetMCD"; version="0.0.5"; sha256="034wb5hwpikli6h2rwiqr19qvzxrr4qwi4q436y7c5a5wgkfzgl5"; depends=[pcaPP Rcpp RcppEigen robustbase]; }; DetR = derive2 { name="DetR"; version="0.0.5"; sha256="1dd4nzkgj5pl9397aa0z3q5fpl27xbdf7q0pqbs821dyynylxzn9"; depends=[MASS pcaPP Rcpp RcppEigen robustbase]; }; @@ -1137,14 +1171,15 @@ in with self; { Dforest = derive2 { name="Dforest"; version="0.4.2"; sha256="19jyph2zqfyq9vv22kb6fqy89l0vcviv19zgk10hbd7q850f6ryn"; depends=[ggplot2 rpart]; }; DiPALM = derive2 { name="DiPALM"; version="1.1"; sha256="0wni4xz8a9mf9pih332k1fmc62bha9rs63x56dn6w85hsd8wqz7n"; depends=[ggplot2 limma WGCNA]; }; DiPhiSeq = derive2 { name="DiPhiSeq"; version="0.2.0"; sha256="11l2inf99vxz9k292307j8c2b25kc1066svy3vxrfl72rrm4fqa7"; depends=[]; }; - DiPs = derive2 { name="DiPs"; version="0.6.1"; sha256="0r6r0i417z4ax7cw1a7jbjhi0h2i2n43vf0y4770hyrl3m6spwfj"; depends=[liqueueR mvnfast plyr]; }; + DiPs = derive2 { name="DiPs"; version="0.6.2"; sha256="13n50wakvh7ny342xl007k1dfbwmgzg8kxvgcpfblaypqn48q09f"; depends=[liqueueR mvnfast plyr]; }; DiSSMod = derive2 { name="DiSSMod"; version="1.0.0"; sha256="199yipbc2sx2lsl51rpfyh80bfxaahfd2llqmfsp946gvj7339hv"; depends=[MASS matrixcalc psych sfsmisc]; }; DiagrammeR = derive2 { name="DiagrammeR"; version="1.0.6.1"; sha256="0gb7ccdrh7jlyqafdk8zs465ygczxxd25s05whn914in1994qkmy"; depends=[downloader dplyr glue htmltools htmlwidgets igraph influenceR magrittr purrr RColorBrewer readr rlang rstudioapi scales stringr tibble tidyr viridis visNetwork]; }; DiagrammeRsvg = derive2 { name="DiagrammeRsvg"; version="0.1"; sha256="0j2cm1mx3zrb2k3pcrb96z2z3kws61gyyjsjjv5rqcb5lzdgi65k"; depends=[V8]; }; - DiallelAnalysisR = derive2 { name="DiallelAnalysisR"; version="0.3.0"; sha256="10qfjskawrdrvayrzxpblx9jxwngpwwi1q5aisvx3rpf9c3xrii2"; depends=[ggplot2]; }; - DiceDesign = derive2 { name="DiceDesign"; version="1.8-1"; sha256="11s1m543kxd6gv4amh8z6pph1n67sj9sfwm6hjy83wfs65syf5vp"; depends=[]; }; + DiallelAnalysisR = derive2 { name="DiallelAnalysisR"; version="0.4.0"; sha256="087kzxdvhabl1f9q5mbr4dllrpsx86a08bs34xsam2g2x63vmdxq"; depends=[ggplot2]; }; + DiceDesign = derive2 { name="DiceDesign"; version="1.9"; sha256="1a8ixa65xgyfri03cviic8qi2plbhdyz8m02bwif8w94w0q3ghlk"; depends=[]; }; DiceEval = derive2 { name="DiceEval"; version="1.5"; sha256="0yvpq0bbp70ipjc9bg2jf0ah7m5nsil669vhky11f42kijm8rsj2"; depends=[DiceKriging]; }; - DiceKriging = derive2 { name="DiceKriging"; version="1.5.8"; sha256="0xsdpyqv7hjr6x617kiymi9al9ds11nppqksi2wdn2dm9j4jpl0i"; depends=[]; }; + DiceKriging = derive2 { name="DiceKriging"; version="1.6.0"; sha256="0jfb2li6b93fkwgjkr4jwxnvv7zb0aqk9lkf2mnv2awzh0r16pdb"; depends=[]; }; + DiceOptim = derive2 { name="DiceOptim"; version="2.1.1"; sha256="0qqvj97lzir6sgvshg13lr3c9yw1qybqh4m34kj37fk8gaab1py7"; depends=[DiceDesign DiceKriging mnormt pbivnorm randtoolbox rgenoud]; }; DiceView = derive2 { name="DiceView"; version="2.0-1"; sha256="0y2k7j63qj1nwks9pbm85zj05mfx4q74w52hl2lbj1z1pk3hhcdh"; depends=[DiceDesign DiceEval DiceKriging geometry R_cache scatterplot3d]; }; Dict = derive2 { name="Dict"; version="0.1.0"; sha256="1v8yp03gajg9i82qyfww14jx93l4jbfq8mh6jqyf6calgrsj06jc"; depends=[dplyr magrittr purrr R6 rlang]; }; DidacticBoost = derive2 { name="DidacticBoost"; version="0.1.1"; sha256="0z1h61n6nfjvb64fgkzi1sq7ag747crhh593hxkx0cpza29778rz"; depends=[rpart]; }; @@ -1155,11 +1190,12 @@ in with self; { DiffusionRgqd = derive2 { name="DiffusionRgqd"; version="0.1.3"; sha256="1gf5jpvimfrc9ccva0jk85rl4zfkbijm2305ky1rxcgm4kgw4lax"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; DiffusionRimp = derive2 { name="DiffusionRimp"; version="0.1.2"; sha256="1h7145ldlgwrrwj4l1wxdp2rbg2pm4v3pngiq0saz0xi3vpcxwl6"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; DiffusionRjgqd = derive2 { name="DiffusionRjgqd"; version="0.1.1"; sha256="1yb1jaq324qm2x8cl3bs2dflnsx8yfygpw2m3kk5hzaai9gfkqjf"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; - DirStats = derive2 { name="DirStats"; version="0.1.6"; sha256="1ysz68x18v77b05r6yfkc0c0x87cvj2zxkhl638af0a76xa5ajg4"; depends=[movMF rotasym]; }; + DirStats = derive2 { name="DirStats"; version="0.1.7"; sha256="0xc8cns8l83y1k2ad10nxm4290xv8wlrhcx0sj7mpklzpizi9zin"; depends=[movMF rotasym]; }; + Dire = derive2 { name="Dire"; version="1.0.3"; sha256="0g02ak7ki103a3jw3pj3c6rmggcjv8dk0zk4mwann6xbbviwz2ls"; depends=[foreach haven iterators Matrix minqa Rcpp]; }; DirectEffects = derive2 { name="DirectEffects"; version="0.2"; sha256="0cawn1i1cyczsr9zpcaky79dfdl9anfjgiaa2404capacnj3call"; depends=[Formula glue sandwich]; }; DirectStandardisation = derive2 { name="DirectStandardisation"; version="1.3"; sha256="1qlfvzlig3a2v78fiq6sbbpxklmjczikxdw57m6mqngzrl9vdl2g"; depends=[]; }; DirectedClustering = derive2 { name="DirectedClustering"; version="0.1.1"; sha256="1shdqz0c5bbgknvfqr3ais26cb5mpywnah3d3584w97sy8v7gxm2"; depends=[igraph]; }; - Directional = derive2 { name="Directional"; version="4.5"; sha256="19xd0krp54gjlhy70689g9ypp3xf3612446y6srsc4j06lv86xkl"; depends=[bigstatsr doParallel foreach MASS RANN Rfast Rfast2 rgl]; }; + Directional = derive2 { name="Directional"; version="4.9"; sha256="0jgb2805f14yprqnhgk8zxqr4xb8v6ag6f2s5cn378gn0xirc1q7"; depends=[bigstatsr doParallel foreach RANN Rfast Rfast2 rgl]; }; DirichletReg = derive2 { name="DirichletReg"; version="0.7-0"; sha256="10189c3mj85nbqp7fd5ll4g0qr950309hhma4b7bpv2gb7hvpzsp"; depends=[Formula maxLik]; }; DisHet = derive2 { name="DisHet"; version="1.0.0"; sha256="056jcs1qpiyadnmlzd0cj4kp0qzkichxi0pdnxypyq1fsqnpvan3"; depends=[gtools matrixStats]; }; DisImpact = derive2 { name="DisImpact"; version="0.0.14"; sha256="1pzvrk9qna9yrmjxn964ysncpram7qqf3sxmfpnjn7zwicjkj4is"; depends=[dplyr purrr rlang tidyr tidyselect]; }; @@ -1173,26 +1209,27 @@ in with self; { DisimForMixed = derive2 { name="DisimForMixed"; version="0.2"; sha256="00mknsalikangr17946877m5fy2jgkgasgl6ng4f2nr44f0q9l6q"; depends=[cluster dplyr]; }; Distance = derive2 { name="Distance"; version="1.0.2"; sha256="09cgbhk2ilxkbbaw3hw6zdgrsq174y7bffgkc48gaybnvf8vdgy5"; depends=[dplyr mrds rlang]; }; DistatisR = derive2 { name="DistatisR"; version="1.0.1"; sha256="0myzfki8yrk0nhgdgsqs4wjbqhzmkdil1g005hc7p4lz3gi09bfx"; depends=[car prettyGraphs]; }; - Distributacalcul = derive2 { name="Distributacalcul"; version="0.3.0"; sha256="08v6wc7al6wbf06i22g8cil1a5c4incr9d1c2znb4zgjj31ibbzp"; depends=[dplyr ggplot2 plotly rlang shiny shiny_i18n shinydashboard shinydashboardPlus shinyWidgets statmod tippy]; }; DistributionFitR = derive2 { name="DistributionFitR"; version="0.1"; sha256="0wg43gqsdy1ja0l489k27k9q1w2zq45wzmqnv9wfc734rf8kvlba"; depends=[doParallel foreach stringr]; }; DistributionOptimization = derive2 { name="DistributionOptimization"; version="1.2.6"; sha256="0pp0f7c9szyx426bnnz4fz4vh5q73m8x896z6pqgx04b6v445361"; depends=[AdaptGauss GA ggplot2 pracma]; }; DistributionTest = derive2 { name="DistributionTest"; version="1.1"; sha256="11xhr6yv42s1i4qqlb1pvzm8q2116v10gjlkhl0ml3id6lx27nmj"; depends=[MASS]; }; DistributionUtils = derive2 { name="DistributionUtils"; version="0.6-0"; sha256="08vq54pyqxlqsj6q6gsg5ikqa0z3x842j52ld5dxaq272p6xchvl"; depends=[]; }; DivE = derive2 { name="DivE"; version="1.2"; sha256="1czj89ljvpgl03471cknki2lc64swdqdpf5wsgicad35kgmlrwlh"; depends=[deSolve FME rgeos sp]; }; + DiversificationR = derive2 { name="DiversificationR"; version="0.1.0"; sha256="1gybzpv5bl17lp1nxhqzsvj585j3lylfd388vp401lmri3k8r4cs"; depends=[]; }; DiversityOccupancy = derive2 { name="DiversityOccupancy"; version="1.0.6"; sha256="16x3fpchgd12mccvr1k11vjka97sy5vjvjcyd5y3pskgnpycc2sv"; depends=[dplyr ggplot2 glmulti MuMIn qpcR raster unmarked vegan]; }; DnE = derive2 { name="DnE"; version="2.1.0"; sha256="02cbfb3m9xf24wkgqc06k3k0rx7qlqh4ma43khg6fpvif6yyahrn"; depends=[]; }; DoE_MIParray = derive2 { name="DoE.MIParray"; version="0.13"; sha256="0lbcqfizgrnqmp0b2yn14br7xmabbhywy8h7161hx6hnvnam5r99"; depends=[combinat DoE_base]; }; - DoE_base = derive2 { name="DoE.base"; version="1.1-5"; sha256="15m1axp8wpvqdly62chb4p0jzfvmkma6bsw8gagzwm9ibh6xwmkq"; depends=[combinat conf_design lattice MASS numbers partitions vcd]; }; + DoE_base = derive2 { name="DoE.base"; version="1.1-6"; sha256="13lkwkhc376dc69kkhryjr1ld9y1yasfpdf2rxblncxg4k79193a"; depends=[combinat conf_design lattice MASS numbers partitions vcd]; }; DoE_multi_response = derive2 { name="DoE.multi.response"; version="0.1.0"; sha256="1289jlp10999kvyg5adw3dyc2mhh20i6biyqjbxd6g80a8dajknx"; depends=[DoE_wrapper]; }; DoE_wrapper = derive2 { name="DoE.wrapper"; version="0.11"; sha256="08bgfaiivqqnkhjb18flk1cpa33rh70i6g8v25x1ma3ffxqrwh96"; depends=[AlgDesign DiceDesign DoE_base FrF2 lhs rsm]; }; DoEstRare = derive2 { name="DoEstRare"; version="0.2"; sha256="0y9ymw7114jk1rwiasq400bpgvkxv6rpc954c7v9mgxd3c2nfza7"; depends=[]; }; DoTC = derive2 { name="DoTC"; version="0.2"; sha256="1hjjkmxrbiysy3xl6n4q7kxcygdq68jcsgki1p937zj9a17sa62j"; depends=[ggplot2 plyr]; }; + DockerParallel = derive2 { name="DockerParallel"; version="1.0.0"; sha256="1sdghpm6zka87n35l1824mj682r7a6g4yisb5nrh95bkhwn3azbc"; depends=[adagio]; }; Dodge = derive2 { name="Dodge"; version="0.9-2"; sha256="0767n6hyspqrv5cgx3ghhai0qffj6haga7s86pv7mq8zvjcxjlzv"; depends=[]; }; - Dominance = derive2 { name="Dominance"; version="1.1.2"; sha256="0hdia3pp6k035mb28z1iddq1zipy0wq0644sqd49wrsi2k6hcl9h"; depends=[chron gdata igraph XLConnect]; }; + Dominance = derive2 { name="Dominance"; version="1.2.0"; sha256="1z2gcs7myf90986gzw9g3914ph5cyg6pq6k53h4z566x883q8maz"; depends=[chron igraph]; }; DoseFinding = derive2 { name="DoseFinding"; version="0.9-17"; sha256="1lj96443dj61nxqfl20rc1f6ja2clbr9j6b6l8vi2gpspx5i76qw"; depends=[lattice mvtnorm]; }; DoubleCone = derive2 { name="DoubleCone"; version="1.1"; sha256="1kbvsj93nn2306s6pgqiiznmlcn2nqsgcxinihl613ivczxhzpqg"; depends=[coneproj MASS Matrix]; }; DoubleExpSeq = derive2 { name="DoubleExpSeq"; version="1.1"; sha256="00xpj5xmpgmvp6h76imkmghrnlfk6c50ydvv0jram6m6ix3z8323"; depends=[numDeriv]; }; - DoubleML = derive2 { name="DoubleML"; version="0.1.1"; sha256="1kvix57h29khdfq6cbjh8vza4fxqfswwc8cq28x7yzcw1g9mw11r"; depends=[checkmate clusterGeneration data_table mlr3 mlr3tuning mvtnorm R6 readstata13]; }; + DoubleML = derive2 { name="DoubleML"; version="0.2.1"; sha256="1y9vahinxnr7x3vb2nd7wpl4acsx5vnmgwn10prh4pabr1675vdi"; depends=[checkmate clusterGeneration data_table mlr3 mlr3learners mlr3tuning mvtnorm R6 readstata13]; }; Dowd = derive2 { name="Dowd"; version="0.12"; sha256="1fgaq22n7gm8pqxdfkiayqgjfqjn7knjjjr1x12jgv77cv08xyjk"; depends=[bootstrap forecast MASS]; }; Dpit = derive2 { name="Dpit"; version="1.0"; sha256="02pnc00sk3bwxmxrg27638x0q62r7nsx2nr14zjjc5q880prdisv"; depends=[fitdistrplus gsl moments VGAM]; }; DrBats = derive2 { name="DrBats"; version="0.1.5"; sha256="1iaffippp9kwfrwryf7klmn8nsm2k8pc0bkgpxcsl4vxyy2na3mp"; depends=[ade4 coda MASS Matrix rstan sde]; }; @@ -1201,7 +1238,7 @@ in with self; { DramaAnalysis = derive2 { name="DramaAnalysis"; version="3.0.2"; sha256="0nsnwais0r592c50nphfzkr1bbygl67mriwsx7dxbvmpdsswlvl1"; depends=[data_table git2r httr readr reshape2 stringr tokenizers xml2]; }; DriftBurstHypothesis = derive2 { name="DriftBurstHypothesis"; version="0.4.0.1"; sha256="1pmsbv1rl79s520nxj536m8gf7xyfjskj8r88rxmxscbgp8c1xz2"; depends=[Rcpp RcppArmadillo xts zoo]; }; DrillR = derive2 { name="DrillR"; version="0.1"; sha256="0n7pim5kk0wfdjcc67v4vvdb7wyhn5bcgi2a12nbyfyydss7pk1g"; depends=[httr]; }; - DriveML = derive2 { name="DriveML"; version="0.1.0"; sha256="0ikhbdgshx51fk629yhwhrdwiqg40qa7rsljb5ihax02cg0cv796"; depends=[caTools data_table ggplot2 iml mlr ParamHelpers rmarkdown sampling SmartEDA]; }; + DriveML = derive2 { name="DriveML"; version="0.1.2"; sha256="1zs518rhilb00pciv1mcgp3mz87pqszy0lcfsln8hrn2p68xz8wq"; depends=[caTools data_table ggplot2 iml mlr ParamHelpers rmarkdown sampling SmartEDA]; }; DrugClust = derive2 { name="DrugClust"; version="0.2"; sha256="0acvjqwzkbjmy101m501l7fkfxzkp6zflwvn56li5307xv9ggnfg"; depends=[cclust cluster e1071 MESS ROCR]; }; DstarM = derive2 { name="DstarM"; version="0.4.0"; sha256="0wm5kr2pkgbvh9svjq8zq46zn50hwf58rs3y1ybnwcfjc2q75h1s"; depends=[DEoptim ggplot2 Rcpp RcppArmadillo rtdists RWiener]; }; DtD = derive2 { name="DtD"; version="0.2.2"; sha256="1czspjdxjhbfk2df7wk0x3d1ilwrjqw4s4gdc4hq0gjcjqyx0c39"; depends=[checkmate Rcpp RcppArmadillo]; }; @@ -1217,7 +1254,7 @@ in with self; { DynamicGP = derive2 { name="DynamicGP"; version="1.1-6"; sha256="1d3ycx6vcv7rcagaxvfyxgsdigbzigxarm66ypkdasbli1507is3"; depends=[lhs]; }; DynareR = derive2 { name="DynareR"; version="0.1.1"; sha256="1b7m9z09ps9idj1arza4ka1silrf8rm3gk154px0z3612ls3a3ir"; depends=[knitr]; }; DysPIA = derive2 { name="DysPIA"; version="1.3"; sha256="0ih8sl89h6xbmmjjsbxcvgp6wqk7f1wqzwkc43k3i5w7fgb0hlpc"; depends=[BiocParallel data_table DysPIAData fastmatch parmigene Rcpp]; }; - DysPIAData = derive2 { name="DysPIAData"; version="0.1.1"; sha256="0iv8hb62gql2n781bgvp4svywgzffqs6lcdcz9966gh6w7x1jfwf"; depends=[]; }; + DysPIAData = derive2 { name="DysPIAData"; version="0.1.2"; sha256="1i4z9xhnzih7jnj3l1d6wpgfsayb452sh4q99w2npg1iipsjb1vl"; depends=[]; }; E4tools = derive2 { name="E4tools"; version="0.1.1"; sha256="1kmj1fddybjia9ninhcy75kdmq152zjw7s24chpqr5wsblffr3yx"; depends=[accelerometry anytime BBmisc chron data_table DataCombine doParallel doSNOW foreach ggplot2 hms scales signal]; }; EAinference = derive2 { name="EAinference"; version="0.2.3"; sha256="1kzcfya3z6rf1vqjn72yjymdhrn4dzgmwifh3w6k22cy5jxffzn4"; depends=[hdi limSolve MASS msm mvtnorm Rcpp RcppArmadillo]; }; EBASS = derive2 { name="EBASS"; version="0.1"; sha256="14hxzj06wrc4ihflr7dqk28fsjwbcizr0jy54vhv0mk1y1gd4201"; depends=[]; }; @@ -1228,7 +1265,8 @@ in with self; { EBrank = derive2 { name="EBrank"; version="1.0.0"; sha256="1qzhrr3n2zv31mjp224b35324nr9nigzazyfv11j4zhwl1ipf632"; depends=[]; }; ECGofTestDx = derive2 { name="ECGofTestDx"; version="0.4"; sha256="0y8bw1k9spwxyzc7vsi2iblnmjsidxbybjrzzh2j6frjmv3rk4g1"; depends=[bootstrap orthopolynom]; }; ECLRMC = derive2 { name="ECLRMC"; version="1.0"; sha256="01z2hmbpb754s2rsvx3i5wf7kkkr2mvs2g89ih2bqrif7w5rmgyg"; depends=[softImpute]; }; - ECOSolveR = derive2 { name="ECOSolveR"; version="0.5.3"; sha256="1xglkx1x9kidznvcz61w0ayhfkgbmkxad92frabr9jsnlf6ns78n"; depends=[]; }; + ECOSolveR = derive2 { name="ECOSolveR"; version="0.5.4"; sha256="0973m346vakgddp92dzqlky0wa196hj341r9y7rz67bc2zl8jx2x"; depends=[]; }; + ECTTDNN = derive2 { name="ECTTDNN"; version="0.1.0"; sha256="1ddwf040yp4c7nxvivml0xhad5qdc6jlf17c1lh4mssm5c0pp14w"; depends=[forecast urca vars]; }; ECctmc = derive2 { name="ECctmc"; version="0.2.5"; sha256="0prryvc17bm1xrhzlqk2w9nj181bg99j1dph3d36h0n1vfq1d7if"; depends=[Rcpp RcppArmadillo]; }; ECharts2Shiny = derive2 { name="ECharts2Shiny"; version="0.2.13"; sha256="0dq8ja4ydxnc7qx35qhh9ryqgi7ambwz6ka2821mmq3p994crswn"; depends=[jsonlite shiny]; }; ECoL = derive2 { name="ECoL"; version="0.3.0"; sha256="02j4yl6hi83f6m529r6n0gaz8wsy2pi0ncy2g95fjhs8ib0kfn4f"; depends=[cluster e1071 FNN igraph MASS]; }; @@ -1237,36 +1275,40 @@ in with self; { EDISON = derive2 { name="EDISON"; version="1.1.1"; sha256="12cc13ng5fc4nm0nvqxqplpb2ycz4cln73xqkk85dka2fnpykjc7"; depends=[corpcor MASS]; }; EDMeasure = derive2 { name="EDMeasure"; version="1.2.0"; sha256="1gyv86vip0a3939dbbwz29xkqzncw24r68fzykdjnv3b995510iv"; depends=[dHSIC energy rBayesianOptimization]; }; EDNE_EQ = derive2 { name="EDNE.EQ"; version="1.0"; sha256="13aflnpznpzjrrdrn0r7v2mch6hjd77s6c3l7mnc2p59vq7mzmpg"; depends=[MASS]; }; - EDOIF = derive2 { name="EDOIF"; version="0.1.2"; sha256="0aiz8nxa56qcjcrp6j7vfn02vmf6n00wnir6cxgk2kh9q5rp5ds7"; depends=[boot distr ellipsis ggplot2 igraph simpleboot]; }; + EDOIF = derive2 { name="EDOIF"; version="0.1.3"; sha256="1lq4j5axybhv34mdsz0rn5nz9x3rzjf6bczzfzrf75k6pwqxim1w"; depends=[boot distr ellipsis ggplot2 igraph simpleboot]; }; + EDOtrans = derive2 { name="EDOtrans"; version="0.1.0"; sha256="0xsfh3aib21d6mm3a0ii28m216vgdz8hqx859mxa6bzplp0yhich"; depends=[ABCanalysis AdaptGauss ClusterR DataVisualizations DistributionOptimization ggplot2 rlang]; }; EEM = derive2 { name="EEM"; version="1.1.1"; sha256="0w20kakgcpyhfi7fcrss4w67pbaj87hi2scy7g05q3sg2ygac7gj"; depends=[colorRamps ggplot2 R_utils reshape2 sp]; }; + EEMDelm = derive2 { name="EEMDelm"; version="0.1.0"; sha256="18m4b22sar14admlhagjdxzq16ynvam2c0cv3z168x8xh6zv2xpr"; depends=[forecast nnfor Rlibeemd]; }; EFA_MRFA = derive2 { name="EFA.MRFA"; version="1.0.9"; sha256="0id0dhpq9350ax573i769m83fncrd6rlp4qmwvf9jz1lbksighf0"; depends=[ggplot2 optimbase PCovR psych reshape2 scales]; }; - EFA_dimensions = derive2 { name="EFA.dimensions"; version="0.1.6"; sha256="1372f56h7plijyga851nxjb4j2h3f3wf81qb1zjrqfv7k4imdp25"; depends=[polycor psych]; }; - EFAtools = derive2 { name="EFAtools"; version="0.3.0"; sha256="1wksbf485f2iqclh6gnrg2r18sa7f9qmgjgxf0yb5fcwdkivhc79"; depends=[checkmate cli crayon dplyr future future_apply ggplot2 GPArotation lavaan magrittr progress progressr psych Rcpp RcppArmadillo rlang stringr tibble tidyr viridisLite]; }; + EFA_dimensions = derive2 { name="EFA.dimensions"; version="0.1.7.2"; sha256="0b9a5z462b65di4xa0gkx0z6qz354kxr8059nynfrfyzpch5cz15"; depends=[EFAtools polycor psych]; }; + EFAtools = derive2 { name="EFAtools"; version="0.3.1"; sha256="1s0x8vp18yixn1vscmad8bgmp6nvn8zxx8xx435bmdlxml73c8xd"; depends=[checkmate cli crayon dplyr future future_apply ggplot2 GPArotation lavaan magrittr progress progressr psych Rcpp RcppArmadillo rlang stringr tibble tidyr viridisLite]; }; EFAutilities = derive2 { name="EFAutilities"; version="2.1.1"; sha256="0kdwdjv4c9rfy49qs7a4134vwa2sm2pcam17a3xii2dq8mghg1za"; depends=[GPArotation MASS mvtnorm plyr]; }; - EFDR = derive2 { name="EFDR"; version="1.0"; sha256="1344ysvrniqn1qv2hx9b9afg9fivccfrj393xy9cqz4j395b6jx0"; depends=[copula doParallel dplyr foreach gstat Matrix sp tidyr waveslim]; }; + EFDR = derive2 { name="EFDR"; version="1.2"; sha256="1k6y2qxfw5py1brh25apmzqm00y3a458x0wrrmdg604g1m9zlkg5"; depends=[copula doParallel dplyr foreach gstat Matrix sp tidyr waveslim]; }; EFS = derive2 { name="EFS"; version="1.0.3"; sha256="1q8cf8dnxpv5s3lr9145y0wjhak4rz18dzah4xfs5qr4c8nlpl54"; depends=[party pROC randomForest ROCR]; }; - EGAnet = derive2 { name="EGAnet"; version="0.9.6"; sha256="0ddz6qdvgwj9visdvx3k4wm6qgxn5pvjpd6nyh9h4cz06dd2xji0"; depends=[dplyr glasso igraph lavaan Matrix NetworkToolbox plotly qgraph semPlot]; }; - EGRET = derive2 { name="EGRET"; version="3.0.2"; sha256="02c9cakj7szywx0r4rylbdnk63b4npqp2i5x1fhxjy0j5bn0hc2f"; depends=[dataRetrieval fields foreach survival truncnorm]; }; - EGRETci = derive2 { name="EGRETci"; version="2.0.3"; sha256="1fzcndah890nfd3fg83jhp5lpwb0xfyrccabgvilkrrm4i4x675m"; depends=[binom EGRET]; }; + EGAnet = derive2 { name="EGAnet"; version="0.9.8"; sha256="1mdvp67wnbgmdhdwlgq8p20vhbv4m3fyvdw3zrcxy9zd8mchjydh"; depends=[dplyr GGally glasso igraph lavaan Matrix network NetworkToolbox qgraph semPlot]; }; + EGRET = derive2 { name="EGRET"; version="3.0.5"; sha256="1wjfvinrb3k1x8737ivzlxfjgdndz1zvpkxhd38crsqpjpzjjqd1"; depends=[dataRetrieval fields foreach MASS survival truncnorm]; }; + EGRETci = derive2 { name="EGRETci"; version="2.0.4"; sha256="1g01a03smn5yp261cyk3x310m1mcv4bqyh8y123wam9gpa7dxrp6"; depends=[binom EGRET]; }; EHR = derive2 { name="EHR"; version="0.3-1"; sha256="1grg1k4lgl3gfvjw5srflrvci39gs2hr3mw82nx7yya95m3f30id"; depends=[data_table]; }; EHRtemporalVariability = derive2 { name="EHRtemporalVariability"; version="1.1.2.1"; sha256="1253iya21k9rnp7aqg6cs18haiv5vxhgdhsxbcwzd9wzcxwwab5j"; depends=[dplyr lubridate MASS plotly RColorBrewer scales viridis xts zoo]; }; EIAdata = derive2 { name="EIAdata"; version="0.1.1"; sha256="06xq17x3zdk5q9zjvw3lxvayyggnz4ck4wpzzpsdd3s6j1b0fmhz"; depends=[XML xts zoo]; }; EILA = derive2 { name="EILA"; version="0.1-2"; sha256="0wxl9k4fa0f7jadw3lvn97iwy7n2d02m8wvm9slnhr2n8r8sx3hb"; depends=[class quantreg]; }; + EIX = derive2 { name="EIX"; version="1.2.0"; sha256="02ry0aqqnd0zh6zbvx1dbq3sdahyqcgabhkvbbw4ig0qk70w62aj"; depends=[DALEX data_table ggiraphExtra ggplot2 ggrepel iBreakDown MASS purrr scales tidyr xgboost]; }; EKMCMC = derive2 { name="EKMCMC"; version="0.1.0"; sha256="0sfj6w8780fik0ar9bg8zrxkj10wqagvwrngd58g50fc0z4lhr53"; depends=[numDeriv]; }; EL = derive2 { name="EL"; version="1.0"; sha256="13r7vjy2608h8jph8kwy69rnkg98b2v69117nrl728r3ayc46a18"; depends=[]; }; EL2Surv = derive2 { name="EL2Surv"; version="1.1"; sha256="0bn2481rf61qnia468y7k95hhazjaghrv919a2y9ar5wcz5nq2kk"; depends=[survival]; }; - ELISAtools = derive2 { name="ELISAtools"; version="0.1.0"; sha256="1xd14kp9fcn5zfj0pw1vmzd5wfpcf58fi6mfjx65aagdnac6zfma"; depends=[minpack_lm R2HTML stringi]; }; + ELISAtools = derive2 { name="ELISAtools"; version="0.1.5"; sha256="18f2adhw85f0hsz5gb6xhi0w2phcq364xy9y1jri6ckzs8g0pny7"; depends=[minpack_lm R2HTML stringi]; }; ELMR = derive2 { name="ELMR"; version="1.0"; sha256="0pd3drv485xbdyfwm28kjpd0nd0zv1khfwzki1gh5p1gz9ndwr2x"; depends=[]; }; ELMSO = derive2 { name="ELMSO"; version="1.0.1"; sha256="14wnrqrbbfb37f3wp91qib28bcanflw3asv1y0v748n36x1xbv3m"; depends=[]; }; ELT = derive2 { name="ELT"; version="1.6"; sha256="0vbrf912m6f80sqyyrp0z4jhq38fnmcy6hgwy0qh8wgk3p1aqm7c"; depends=[lattice latticeExtra locfit xlsx]; }; ELYP = derive2 { name="ELYP"; version="0.7-5"; sha256="1j2vwcs443x3pf4zypyvbkn8fb5if9b9hf1s821jjjpgach573sc"; depends=[survival]; }; EM_Fuzzy = derive2 { name="EM.Fuzzy"; version="1.0"; sha256="0sz4zkjn6rdzdqmkq6j24bd4sj91y5lan31bldxdfskgz0jpzhbr"; depends=[DISTRIB FuzzyNumbers]; }; - EMA = derive2 { name="EMA"; version="1.4.7"; sha256="04srg03ywx78cw4w3apqlbiarz1rdk0mq9a5b7mcrif9kc9bg756"; depends=[affy AnnotationDbi Biobase biomaRt cluster FactoMineR gcrma GSA heatmap_plus MASS multtest siggenes survival xtable]; }; EMAtools = derive2 { name="EMAtools"; version="0.1.3"; sha256="1kzna29kd6s2hgli5azrfz85mbyl1x6knvhhhny2scf7a1fcijsy"; depends=[DataCombine ggplot2 lmerTest sjstats]; }; EMC = derive2 { name="EMC"; version="1.3"; sha256="0sdpxf229z3j67mr9s7z4adzvvphgvynna09xkkpdj21mpml23p6"; depends=[MASS mvtnorm]; }; - EMCluster = derive2 { name="EMCluster"; version="0.2-12"; sha256="03s828pczfll5fkwa0w6n4m4wb75paj6x0cxgg9r4qmw8w4ag464"; depends=[MASS Matrix]; }; + EMCluster = derive2 { name="EMCluster"; version="0.2-13"; sha256="0d0zb6bppgbd5kyfzzckxk6w8v4gjvzk6k16xbhvq8gzcs7w4lhf"; depends=[MASS Matrix]; }; EMD = derive2 { name="EMD"; version="1.5.8"; sha256="0bvwx5ry41cpj646v93vm50c6qb3m5d7mda9q7znmcr4sdf521j5"; depends=[fields locfit]; }; - EML = derive2 { name="EML"; version="2.0.4"; sha256="0hwm2sl616mq4504zpyfafv6m6mbrcpk85wjhbmcy5lvgl05njnk"; depends=[digest dplyr emld jqr jsonlite rmarkdown uuid xml2]; }; + EMDANNhybrid = derive2 { name="EMDANNhybrid"; version="0.1.0"; sha256="0mm5zfkrja9pz58psp7b6r1lpixaa9y685xxv9srv9l9cl8d892j"; depends=[EMD forecast nnfor]; }; + EMDSVRhybrid = derive2 { name="EMDSVRhybrid"; version="0.1.0"; sha256="0wis8dh4xd5xldrrfzfr625pix2fvp139q6kj9ff2m6p5wafiabw"; depends=[e1071 EMD]; }; + EML = derive2 { name="EML"; version="2.0.5"; sha256="0g4ilk2d68i1iz2b0ip6kngygvsw457x17f2vhfy3b26xf6ch2q1"; depends=[digest dplyr emld jqr jsonlite rmarkdown uuid xml2]; }; EMMAgeo = derive2 { name="EMMAgeo"; version="0.9.7"; sha256="1wz4zw45xfqbk589cpd188j7619h2ar2czfkisil9x8ksijfixls"; depends=[caTools GPArotation limSolve matrixStats shiny]; }; EMMIXgene = derive2 { name="EMMIXgene"; version="0.1.3"; sha256="0a5q78s9y6ba1641lrv87kglg39x9wbk5xg7ihzbpl4adrb5sz4f"; depends=[BH ggplot2 mclust Rcpp RcppArmadillo reshape scales]; }; EMMIXmfa = derive2 { name="EMMIXmfa"; version="2.0.11"; sha256="06lfmpw908chhzx512anqacixvvx3y02wm1n4wmpb890rd85n11r"; depends=[]; }; @@ -1280,50 +1322,50 @@ in with self; { EMT = derive2 { name="EMT"; version="1.1"; sha256="0m3av1x3jcp3hxnzrfb128kch9gy2zlr6wpy96c5c8kgbngndmph"; depends=[]; }; EMVS = derive2 { name="EMVS"; version="1.1"; sha256="0pxf2vy3ab5d5zbq089fl27x01yyhh7nyp3g1w4xnifwnm55lx9w"; depends=[Rcpp RcppArmadillo]; }; EMbC = derive2 { name="EMbC"; version="2.0.3"; sha256="0ns6jmshblf00n4harhls03q9c6h1wvgvjzn8jvr3kf4gm2iz2jd"; depends=[maptools mnormt RColorBrewer Rcpp RcppArmadillo sp]; }; - ENMTools = derive2 { name="ENMTools"; version="1.0.2"; sha256="19b11y3ph1diqq4a1gqmxhh9c4x13jl3bf0dlp59c53k4nczpviv"; depends=[dismo ENMeval forcats ggplot2 ggpubr gridExtra knitr lhs magrittr raster rgdal rgeos sp spatstat]; }; + EMpeaksR = derive2 { name="EMpeaksR"; version="0.1.0"; sha256="0lb5myzv94j0784akni3v3fmd7f42wiycjg7fm1p3rdgsgd1ql7s"; depends=[]; }; + ENMTools = derive2 { name="ENMTools"; version="1.0.3"; sha256="0m4cd2q0pws3fbjfs0q3b8ximwnifyv7cc0xwjflj3v3fc2jmqng"; depends=[dismo ENMeval forcats ggplot2 ggpubr gridExtra knitr lhs magrittr raster rgdal rgeos sp spatstat spatstat_core spatstat_geom]; }; ENMeval = derive2 { name="ENMeval"; version="0.3.1"; sha256="1l43065mbhlrniqw3pqjz0vn7r2azkikqvm8mjiq5pky9ldhrwp7"; depends=[dismo doParallel foreach maxnet raster]; }; EPGMr = derive2 { name="EPGMr"; version="1.0.0"; sha256="1ii4lccv4hyydy3sd5l7c22pgx27x3mdml20sfbdj85pmpyab6q9"; depends=[]; }; EPT = derive2 { name="EPT"; version="0.7.5"; sha256="1llypf8600mk62cqxnwv5fds8ypfx5is2qkpbp4bh70l3s3lvj31"; depends=[]; }; EPX = derive2 { name="EPX"; version="1.0.3"; sha256="1bq94pxl60y6km1lhi0nzsa5qfkb1gqfx3h002g2n4n0avlq928s"; depends=[doParallel doRNG foreach nnet randomForest rngtools]; }; EQL = derive2 { name="EQL"; version="1.0-1"; sha256="0pa33h0f30l352m6ix296l55lvqxdaib666x2dwy9zx0lmk23w8m"; depends=[lattice ttutils]; }; EQUIVNONINF = derive2 { name="EQUIVNONINF"; version="1.0"; sha256="103wrry0cmikprihmgx8y4kk1pnbjis7rs1xw13w14v902xkr2rq"; depends=[BiasedUrn]; }; - ER = derive2 { name="ER"; version="1.0.2"; sha256="151d120s9kdh8ibxr6j3g40azqb7nzf49ahs1zzza7m5qbsi3nsm"; depends=[ggplot2 glmnet gridExtra pls plsVarSel scales]; }; + ER = derive2 { name="ER"; version="1.1.0"; sha256="03kbr9dams961zqa2mn1x63wp6xbp0bnwfskbxppwy28af4wqk8v"; depends=[ggplot2 glmnet gridExtra pls plsVarSel scales]; }; ERP = derive2 { name="ERP"; version="2.2"; sha256="17i04rgfj9crnvpi7mf2spwmaw9jgw4kn5fx6x9xbl9cvwwx6q4k"; depends=[corpcor fdrtool irlba mnormt pacman]; }; ERSA = derive2 { name="ERSA"; version="0.1.3"; sha256="0djh633vmc89vl4bp7p4bazlb0pshpd2yckfj0yjk6vc9lrbql69"; depends=[broom car combinat dplyr ggplot2 leaps miniUI purrr RColorBrewer shiny tidyr]; }; ES = derive2 { name="ES"; version="1.0"; sha256="1rapwf6kryr6allzbjk6wmxpj9idd3xlnh87rwbh6196xb7rp8lv"; depends=[]; }; ESEA = derive2 { name="ESEA"; version="1.0"; sha256="06r5lki32mxkznj6yxvlz0ikqcxm3jbaralv4qp9xrw6dy6yyg27"; depends=[igraph parmigene XML]; }; ESG = derive2 { name="ESG"; version="1.2"; sha256="17kw82dikcibqsdb1fvbx2x2f3shzbqggygabprcvwki8bg9hgni"; depends=[]; }; ESTER = derive2 { name="ESTER"; version="0.2.0"; sha256="1jiyqq5hgqc754r434sik9jnlpw66xz56cjdf5ig95qkffzsg224"; depends=[brms cowplot doParallel dplyr foreach ggplot2 lme4 magrittr rlang tidyr]; }; - ETAS = derive2 { name="ETAS"; version="0.4.6"; sha256="02xknf7acpha4y2mwn9q974dr2d75nw48wx28i7gprqc7hf6rcsw"; depends=[fields goftest lattice maps Rcpp spatstat]; }; + ETAS = derive2 { name="ETAS"; version="0.4.7"; sha256="1l8l0vmar720jz893kv8d2gg1m1jyxh1dkanh9aaiivdw0wg6k9b"; depends=[fields goftest lattice maps Rcpp spatstat spatstat_core spatstat_geom]; }; ETC = derive2 { name="ETC"; version="1.3"; sha256="1nvb9n0my7h1kq996mk91canxi6vxy3mzhrshrvm13ixvl48lkkh"; depends=[mvtnorm]; }; ETLUtils = derive2 { name="ETLUtils"; version="1.5"; sha256="0s0q4f3wzpdd87l3pnzysa8aq7zgz29589xnm65a6xfy9znbpzs3"; depends=[bit ff]; }; - EValue = derive2 { name="EValue"; version="4.1.0"; sha256="0yxmi1211f7b2kfmxi8kwrmin4jc2dmqy2r6avjk0ydgdv2gw9f3"; depends=[boot dplyr ggplot2 metafor MetaUtility]; }; + EValue = derive2 { name="EValue"; version="4.1.2"; sha256="0339g1034sfkqdry6mf8ly962rk2prsm9q4lszjz9yifvarzxwyr"; depends=[boot dplyr ggplot2 metafor MetaUtility]; }; EW = derive2 { name="EW"; version="1.1"; sha256="0wc3v9qisiikvlp28xhlgsxb92fhkm6vslia6d0vpihyai0p1h1g"; depends=[]; }; EWGoF = derive2 { name="EWGoF"; version="2.2.2"; sha256="19gd9grjjdv6hilqj41g5qhz7m0ga40q88clwggbp5f0f1yd5sym"; depends=[Rcpp]; }; EWOC2 = derive2 { name="EWOC2"; version="1.0"; sha256="1x3l332pmh69kl0c1rka264mi69avdm938mzd79ck4y3qcgn07vr"; depends=[MASS rjags]; }; - EWS = derive2 { name="EWS"; version="0.1.0"; sha256="04bsl0s690k2wm7jnvgihj5r1fd1r3s2547j1sgl0zm8yvia2l8x"; depends=[numDeriv]; }; + EWS = derive2 { name="EWS"; version="0.2.0"; sha256="0rkxnc5pwrjgm2j201rg0z4nqb75rpkqh3hff4lvw1zmnr9flm6r"; depends=[numDeriv]; }; EXRQ = derive2 { name="EXRQ"; version="1.0"; sha256="1iqsr52sl2j5q03122a7rsp6n6a2bkysk2r908c89l36gk4sj2i5"; depends=[mnormt quantreg]; }; EZtune = derive2 { name="EZtune"; version="3.0.0"; sha256="1s4hdd1j352k8brbfbdyh8mw183df2n37a61rlxhswyhfrp2w877"; depends=[ada e1071 GA gbm glmnet optimx ROCR rpart]; }; - Eagle = derive2 { name="Eagle"; version="2.4.2"; sha256="13i64kalb5hjfzvj3rs54rn4lzkwr51vmbapqibcddga22d6i40b"; depends=[data_table ggplot2 ggthemes matrixcalc mmap plotly R_utils Rcpp RcppEigen shiny shinyBS shinyFiles shinyjs shinythemes]; }; + Eagle = derive2 { name="Eagle"; version="2.4.4"; sha256="190lb8xwcwqx6ww911m5qvwl17w9p6688sai3far394jaj17shxp"; depends=[data_table ggplot2 ggthemes matrixcalc mmap plotly R_utils Rcpp RcppEigen shiny shinyBS shinyFiles shinyjs shinythemes]; }; EasyABC = derive2 { name="EasyABC"; version="1.5"; sha256="17qv6y8sf2iwwqcv5wfg6sii259gv5jyr72dnfpir2bw78wb3mqx"; depends=[abc lhs MASS mnormt pls tensorA]; }; + EasyDescribe = derive2 { name="EasyDescribe"; version="0.1.0"; sha256="0is3j7myj4vjkg5hjwd1yzwyf1y8pxyn6710rphhaw85y86ba2mh"; depends=[CATT FSA gmodels multiCA psych rcompanion trend]; }; EasyHTMLReport = derive2 { name="EasyHTMLReport"; version="0.1.1"; sha256="1hgg8i7py7bx48cldyc7yydf0bggmbj3fx3kwiv9jh1x5wyh929z"; depends=[base64enc ggplot2 knitr markdown reshape2 scales xtable]; }; - EasyMARK = derive2 { name="EasyMARK"; version="1.0"; sha256="10slkblbyxq98c3sxgs194dnkx996khfcpxj6jhz355dp35z7c9d"; depends=[coda doParallel foreach MASS random rjags stringr]; }; EasyMx = derive2 { name="EasyMx"; version="0.2-12"; sha256="00wj08nwv5zi5d4a1fss40f4cms4svam1hmmxvh60hvc55ygsc3z"; depends=[OpenMx]; }; EbayesThresh = derive2 { name="EbayesThresh"; version="1.4-12"; sha256="07a2dd3za2dc81n6m2xy794sclp3yw7f46lg1igaflh7m9407198"; depends=[wavethresh]; }; Ecdat = derive2 { name="Ecdat"; version="0.3-9"; sha256="112yg3v0pwssfw38nbbrrn1zrlg2h39brr79m3rdlp8hr810q92b"; depends=[Ecfun]; }; Ecfun = derive2 { name="Ecfun"; version="0.2-4"; sha256="0qi0582yxs2bpyryv55j2wr6f20g6zchp1z9r54wakhxr3sllr50"; depends=[BMA fda jpeg MASS mvtnorm RCurl stringi TeachingDemos tis XML xml2]; }; EcoDiet = derive2 { name="EcoDiet"; version="1.0.0"; sha256="19x2ypmsw6jnq1s0nqk3pdkwi5g3g92r6fgxrxlnyvd0jqi9l8b3"; depends=[coda ggplot2 rjags]; }; - EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.1-6"; sha256="15lj6l29lwhk89mbmh5hqshg7yf0kgjlrc07b9x56w8382sg849l"; depends=[doParallel edgebundleR foreach ggplot2 htmlwidgets igraph jsonlite magrittr networkD3 party pheatmap plotly raster reshape2 rgdal rkt SoDA sp]; }; EcoHydRology = derive2 { name="EcoHydRology"; version="0.4.12.1"; sha256="075kgy6cxppkclk6nj5xs1f5yv9w8cpr09xwhf2101a6wswknb88"; depends=[DEoptim operators topmodel XML]; }; EcoIndR = derive2 { name="EcoIndR"; version="1.6"; sha256="1pichrwny5hyb19919ldbgkdxp1s6vs03yw0x43ww13ldi314zbn"; depends=[rgeos]; }; EcoNetGen = derive2 { name="EcoNetGen"; version="0.2.3"; sha256="05j8m9vzkwlsw1h69s5myhbg85vyhqdxcl9r5mdwsrk9f58wajmz"; depends=[ggplot2 igraph]; }; - EcoSimR = derive2 { name="EcoSimR"; version="0.1.0"; sha256="13ni3vdfahqjyb9xrv7fmnbj5m5n3jwfh1bl9r0bvhi5w72kb7rj"; depends=[MASS]; }; EcoTroph = derive2 { name="EcoTroph"; version="1.6"; sha256="0zi6g0ra107s47r32mm9h6r1wll3avi0mpjmhcr0nj9y48nv14w3"; depends=[XML]; }; EcoVirtual = derive2 { name="EcoVirtual"; version="1.1"; sha256="1aryl2sb5ak390lgnm427ilm6xv9lmsjhwdnapzc033zvqb099gj"; depends=[]; }; Ecohydmod = derive2 { name="Ecohydmod"; version="1.0.0"; sha256="0imkzjqp3g28l42jz5m4p85wg5rawmn9hy1wys9xndnaliv6d7r2"; depends=[]; }; EconDemand = derive2 { name="EconDemand"; version="1.0"; sha256="1slpwiaxj7w21zdri9myrzwbwzl62m3cnp0g4fr2rkdlzgb6j5yj"; depends=[]; }; - EcotoneFinder = derive2 { name="EcotoneFinder"; version="0.2.2"; sha256="02f9sm5dc7150yj6blmg1zgwppj396639v2wc1ypbal6bc0fphy4"; depends=[cluster colorspace corrplot e1071 ggplot2 igraph philentropy plyr purrr qgraph reshape rlang Rmisc vegan vegclust withr]; }; - EdSurvey = derive2 { name="EdSurvey"; version="2.6.1"; sha256="1ixqbbpl90pvw2n4rczh336jni9xz0dvr2l5qwvwv9kv75q1hgj3"; depends=[car data_table Formula glm2 haven LaF lfactors lme4 MASS Matrix NAEPprimer quantreg readxl tibble wCorr WeMix xtable]; }; + EcotoneFinder = derive2 { name="EcotoneFinder"; version="0.2.3"; sha256="1liqjakzg4c5kgjiir8i4fp4ax0737lfwriz277crh9p3jn3dgmh"; depends=[cluster colorspace corrplot e1071 ggplot2 igraph philentropy plyr purrr qgraph reshape rlang Rmisc vegan vegclust withr]; }; + Ecume = derive2 { name="Ecume"; version="0.9.1"; sha256="093yx24hckgwvkdjgir33lkc7hhiv4is8a4a7fdcrp46iszx0b4i"; depends=[caret dplyr e1071 kernlab magrittr pbapply spatstat spatstat_geom transport]; }; + EdSurvey = derive2 { name="EdSurvey"; version="2.6.9"; sha256="022bir08fjrf1qq2hs5wbblybbaq3dgzwk6hg997vvkpyg2vzsnn"; depends=[car data_table Formula glm2 haven LaF lfactors lme4 MASS Matrix NAEPprimer quantreg readxl tibble wCorr WeMix xtable]; }; EditImputeCont = derive2 { name="EditImputeCont"; version="1.1.6"; sha256="1hpm198awl30i7vbg1jk578s2i3f2kskirb33xvampcwn8mz0nhh"; depends=[editrules igraph Rcpp]; }; EffectLiteR = derive2 { name="EffectLiteR"; version="0.4-4"; sha256="17mhp4acj0myr2b54hgbb3wi5j6a6q999nqr9lwcbx3plyrwlljl"; depends=[car foreign ggplot2 lavaan lavaan_survey nnet shiny survey]; }; EffectStars = derive2 { name="EffectStars"; version="1.9-1"; sha256="131w5bdc615gaa2czi4wyc2f96jcg24ahcmggajrvyhxmi6rag5x"; depends=[VGAM]; }; @@ -1332,15 +1374,15 @@ in with self; { EffectsRelBaseline = derive2 { name="EffectsRelBaseline"; version="0.5"; sha256="1dsnakcrgmlx44599ii92wvhxbxrh0hij59709wsskx1x1152zvh"; depends=[]; }; EfficientMaxEigenpair = derive2 { name="EfficientMaxEigenpair"; version="0.1.4"; sha256="1s0i9a2vk2g4f5gadsvzjfkw91hcjsrbyjg2vgnj1v17xrwgp40w"; depends=[]; }; EigenR = derive2 { name="EigenR"; version="1.0.0"; sha256="173yfqipha8g6m4djkgxki8wlys72xq9cpj7zir9r5lwfkygdzfc"; depends=[Rcpp RcppEigen]; }; - EleChemr = derive2 { name="EleChemr"; version="1.1.0"; sha256="109dv7ayg5nm6zjd70dp8h5qqwrijikymzgb41dl8vx4pqhv43v3"; depends=[ggplot2]; }; + EleChemr = derive2 { name="EleChemr"; version="1.2.0"; sha256="1wr2lkaf56qxsnqi7mgbgzy72lhkr0xlr1w1l9hy1dpmmqcqw7l3"; depends=[ggplot2]; }; EloChoice = derive2 { name="EloChoice"; version="0.29.4"; sha256="1g8ivvnv16c2gniwd9xa9z89bm4rac0nrg3mcg1risgf9yk4rgm5"; depends=[psychotools Rcpp RcppArmadillo Rdpack]; }; EloOptimized = derive2 { name="EloOptimized"; version="0.3.0"; sha256="185vh8h6r5wqcbaq3glq8k3fr8jp6h3q2h2ly54agi6bi3fvbs05"; depends=[BAMMtools dplyr lubridate magrittr reshape2 rlang rlist]; }; EloRating = derive2 { name="EloRating"; version="0.46.11"; sha256="09nh3ia4s3c9yjhw0f0haqb26fryfc4lf9rgfcbqqzzwgdr1invj"; depends=[network Rcpp RcppArmadillo Rdpack sna zoo]; }; ElstonStewart = derive2 { name="ElstonStewart"; version="1.1"; sha256="1y2g4x3fhi78c2406bk8r8c3x9zhx8ya3qlbnypdm65j0minixsn"; depends=[digest kinship2]; }; EmbedSOM = derive2 { name="EmbedSOM"; version="2.1.1"; sha256="1w61dni4vsglxqdhwdy5dcmzb6hx1wb9fhfki8wmal1yaza23ljy"; depends=[FNN ggplot2 igraph Matrix Rtsne umap uwot]; }; EmiStatR = derive2 { name="EmiStatR"; version="1.2.2.0"; sha256="0xwmwbybiyb9688l5n98vir3rwbbjgpw5qb25p20lhlj1pqg95w1"; depends=[doParallel foreach lattice xts zoo]; }; - EmissV = derive2 { name="EmissV"; version="0.665.3.0"; sha256="0wfksrca1wl0ic7vqzvns4xsg8vfv1hzpc6v7mq1ibn0c0m68rk3"; depends=[data_table ncdf4 raster sf sp units]; }; - EmpiricalCalibration = derive2 { name="EmpiricalCalibration"; version="2.0.2"; sha256="10as0xl24w9pap26cz21nqgysba70l9s4qxfbia7x0wfsz2s25jf"; depends=[ggplot2 gridExtra]; }; + EmissV = derive2 { name="EmissV"; version="0.665.5.2"; sha256="056xg4gmjwykgjzd5x21blkvwprfw8yl8rw8h1ym0kp1cljy2qdm"; depends=[data_table ncdf4 raster rgdal sf sp units]; }; + EmpiricalCalibration = derive2 { name="EmpiricalCalibration"; version="2.1.0"; sha256="0r65a34lj5k7vp9kxnhf9rnwpjs85331wqp6laxizvyjs5dlfplf"; depends=[ggplot2 gridExtra rlang]; }; EncDNA = derive2 { name="EncDNA"; version="1.0.2"; sha256="0wy2cmcvyqjhg5mqbvdzmihfv8swx7ym2n9mjdqgx0kgnc7k614y"; depends=[Biostrings]; }; EnergyOnlineCPM = derive2 { name="EnergyOnlineCPM"; version="1.0"; sha256="1a3wvclqdwcvq5inhliwjnd7xzqbjvzs8h8ncy6qlhjq6s5n7nm8"; depends=[energy MASS]; }; EngrExpt = derive2 { name="EngrExpt"; version="0.1-8"; sha256="0zclvckj2i7j4kfs58hcjcl722vl2y6dcnjz238cjfgwv279gqhp"; depends=[lattice]; }; @@ -1352,22 +1394,22 @@ in with self; { EntropyEstimation = derive2 { name="EntropyEstimation"; version="1.2"; sha256="13kb83lfpkw6yq687j0ci23yn5c9dqjibybyyaplk6jixy08lrvy"; depends=[]; }; EntropyExplorer = derive2 { name="EntropyExplorer"; version="1.1"; sha256="02ljnq9ayxg4lrrnb6nlxr1k5ki8dd5i8hjb9fvvb19hwr2id5h4"; depends=[]; }; EntropyMCMC = derive2 { name="EntropyMCMC"; version="1.0.4"; sha256="065djml9dmn5ahbgaljnshvhziwg61xciq6fzh76449x3wy6bg65"; depends=[mixtools RANN]; }; - EnvCpt = derive2 { name="EnvCpt"; version="1.1.2"; sha256="1him08xs05zrifvhkckljgrskrj777dssv5vs8v4hq8apgifm8sa"; depends=[changepoint MASS zoo]; }; + EnvCpt = derive2 { name="EnvCpt"; version="1.1.3"; sha256="1zv2x3svlqrfchr9j4bk2w2sx75zl4886pqk1c1sx5glqrkdbfki"; depends=[changepoint MASS zoo]; }; EnvExpInd = derive2 { name="EnvExpInd"; version="0.1.0"; sha256="063f3c10a7k9j3f85xilj1s6dd9ky5sw8sbvhzkhg5hg92c9dpns"; depends=[dplyr gstat maptools RCurl sp stringi zoo]; }; EnvNicheR = derive2 { name="EnvNicheR"; version="1.4"; sha256="0hxx9wmzlw0clvdgdsy8msc78nvm81j3naxr57i7lqqa360sjy3a"; depends=[IDPmisc]; }; EnvStats = derive2 { name="EnvStats"; version="2.4.0"; sha256="0505j1hh1xky6hm2i8m22pkw62ql7plkxn0v0bcb6dr085v9wia9"; depends=[ggplot2 MASS nortest]; }; EnviroPRA = derive2 { name="EnviroPRA"; version="1.0"; sha256="0yirh3vy7wap0qmm3kvjz9y68gcvp9i8qshv80wh8aijxwklpr8n"; depends=[fitdistrplus kSamples MASS truncdist]; }; EnviroStat = derive2 { name="EnviroStat"; version="0.4-2"; sha256="0ckax6vkx0vwczn21nm1dr8skvpm59xs3dgsa5bs54a3xhn5z9hs"; depends=[MASS]; }; - Epi = derive2 { name="Epi"; version="2.42"; sha256="1vsyxlxl6n5y3wr8w7ji17hnhvbr0xsawqbdl1ajcfg5faizm9sl"; depends=[cmprsk data_table dplyr etm MASS Matrix mgcv numDeriv plyr survival zoo]; }; + Epi = derive2 { name="Epi"; version="2.44"; sha256="1wcxr1f7irgfdwzz4vf67114yhxrhxxxnhy4hfaww0zy91vzxx10"; depends=[cmprsk data_table dplyr etm MASS Matrix mgcv numDeriv plyr purrr survival zoo]; }; EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.15.0"; sha256="1ghpvdfwqcxx4gnn6nfkik6bvdk7xnlrkljlqgzd4rdqlxg4gdq1"; depends=[]; }; EpiCurve = derive2 { name="EpiCurve"; version="2.4-1"; sha256="028yvxf5zmby7m5xwklhx1xrn9yw3dqhwddg03jq42vpjngds1b6"; depends=[dplyr ggplot2 ISOweek RColorBrewer scales tibble timeDate]; }; EpiDynamics = derive2 { name="EpiDynamics"; version="0.3.1"; sha256="0m6yay3r7dqih19f76wxwgq6dh9p1zmp5d9ilj9nd262q61jcy53"; depends=[deSolve ggplot2 reshape2]; }; - EpiEstim = derive2 { name="EpiEstim"; version="2.2-3"; sha256="0rg2ys9plqm9crz4h9xh8k045zwnsdwxsyp4k5bpdkdnrh8nvw08"; depends=[coarseDataTools coda fitdistrplus ggplot2 gridExtra incidence reshape2 scales]; }; + EpiEstim = derive2 { name="EpiEstim"; version="2.2-4"; sha256="12zv1mlb0gqsvff1s0fvqgxqk42c7y9gz3h94mjmf1wbmhsjcqnf"; depends=[coarseDataTools coda fitdistrplus ggplot2 gridExtra incidence reshape2 scales]; }; EpiILM = derive2 { name="EpiILM"; version="1.5.2"; sha256="0drs4qywx9axs7k5qk7sp5r3g8pykn4lqqbm0hxyl24r6b5l3d6b"; depends=[adaptMCMC coda LaplacesDemon]; }; EpiILMCT = derive2 { name="EpiILMCT"; version="1.1.6"; sha256="0qhpmh28zmgqnsyfxgv06g2slix12nn2pglgpvagx2q40rs4fann"; depends=[coda igraph]; }; EpiModel = derive2 { name="EpiModel"; version="2.0.3"; sha256="1nsrgnabl41cpp9c4lsajgkynxbvbqvdihbdzzkwxkaad40b86p8"; depends=[ape deSolve doParallel ergm foreach ggplot2 lazyeval network networkDynamic RColorBrewer tergm tergmLite]; }; EpiNow2 = derive2 { name="EpiNow2"; version="1.3.2"; sha256="1rcyhk0f18asrym9zd7hr5ss7aw2dd2m5wrjcsqkr8q7x6apwh3g"; depends=[BH cowplot data_table futile_logger future future_apply ggplot2 lifecycle lubridate patchwork progressr purrr R_utils Rcpp RcppEigen rlang rstan runner scales StanHeaders truncnorm]; }; - EpiReport = derive2 { name="EpiReport"; version="0.1.1"; sha256="19pl75ld3s3dzg3z54f65j39di5hw3q4jgasj3cw87hjyqgzgbaq"; depends=[dplyr extrafont flextable ggplot2 knitr officer png rmarkdown tidyr zoo]; }; + EpiReport = derive2 { name="EpiReport"; version="1.0.1"; sha256="1h3zpa5gn8siz4mnhbqf5qwdzywwlia2n1lqyhfjbjw6x2lxjv7i"; depends=[dplyr flextable ggplot2 officer png tidyr tidyselect zoo]; }; EpiSignalDetection = derive2 { name="EpiSignalDetection"; version="0.1.1"; sha256="04bagnx9fs0r3167hmwgc389fl5hq7l4j6kdjjmi360vcaimx9qi"; depends=[dplyr DT ggplot2 ISOweek knitr pander rmarkdown shiny surveillance]; }; EpiStats = derive2 { name="EpiStats"; version="1.4-1"; sha256="1i9ymqf0p8wplbmbq4j0ixprjvg22l4z05imxhfj087p3p2sqq8w"; depends=[dplyr epiR]; }; EpistemicGameTheory = derive2 { name="EpistemicGameTheory"; version="0.1.2"; sha256="0b2gnrvhlsw85qv63ib32pj55l7w63wgvbrj5rb209g6h46fby8m"; depends=[lpSolve]; }; @@ -1378,21 +1420,21 @@ in with self; { EstHer = derive2 { name="EstHer"; version="1.0"; sha256="1j8sczwfzil16j85mw5d1c7cxy7wimh0qq7zhmkh7mfnr36m9phr"; depends=[glmnet MASS Rcpp RcppArmadillo]; }; EstMix = derive2 { name="EstMix"; version="1.0.1"; sha256="13zwhxm0qm83c8k5k4slvq2snkmbq1zz3i5cqvxxwhvkb4b8aja4"; depends=[PSCBS Rcpp RcppArmadillo]; }; EstSimPDMP = derive2 { name="EstSimPDMP"; version="1.2"; sha256="05gp0gdix4d98111sky8y88p33qr5w4vffkp6mg9klggn37kdj8j"; depends=[]; }; - EstimDiagnostics = derive2 { name="EstimDiagnostics"; version="0.0.1"; sha256="1jdk6v2n0c73jxvjv5c67pwqzg9zj6zpk1x4mniidw1p2jlxb902"; depends=[foreach ggplot2 goftest reshape2 rlang testthat]; }; - EstimateGroupNetwork = derive2 { name="EstimateGroupNetwork"; version="0.2.2"; sha256="17sx309w4jjhgmpmk27gpj3d5pbra72vxdif4als0jhyd59kk0jw"; depends=[dplyr ggplot2 igraph qgraph]; }; - EstimationTools = derive2 { name="EstimationTools"; version="2.0.0"; sha256="09d0rnlm925my7m3kc3b7dzxvq7zqbyfk3p2m0hr4r6d8s0cwab9"; depends=[BBmisc boot DEoptim foreign numDeriv RCurl Rdpack stringr survival]; }; - EthSEQ = derive2 { name="EthSEQ"; version="2.1.3"; sha256="168wxxb1cyrfr8s4f9gxqj64dmc4i24g5k6yys3xay9c932gf98y"; depends=[data_table gdsfmt geometry MASS plot3D SNPRelate]; }; + EstimDiagnostics = derive2 { name="EstimDiagnostics"; version="0.0.3"; sha256="036kz4zdrgqab2mbzxmbknr9314ap5b2dp75syqhg2mmzw3zf3li"; depends=[foreach ggplot2 goftest reshape2 rlang testthat]; }; + EstimateGroupNetwork = derive2 { name="EstimateGroupNetwork"; version="0.3.1"; sha256="06ihyiq9dw7yg8qpq3yckpd0jk4gjajgvavbj302sj0qssrxgyzh"; depends=[dplyr ggplot2 igraph qgraph]; }; + EstimationTools = derive2 { name="EstimationTools"; version="2.1.0"; sha256="1dpn4jb746ax3s7p7hkrk85hkxjayxp641vxbfp155v0m2gr8ar2"; depends=[autoimage BBmisc boot DEoptim matrixStats numDeriv Rdpack stringr survival]; }; + EthSEQ = derive2 { name="EthSEQ"; version="2.1.4"; sha256="0bffms4d7bg516kma1hcyg8y4czjmz5vizcshh3g990wimmqcwb1"; depends=[data_table gdsfmt geometry MASS plot3D SNPRelate]; }; Eunomia = derive2 { name="Eunomia"; version="1.0.1"; sha256="06a42qsf3nx1pbynikkdvmbhh1rmgnfmiggdn86b3a0ij6cq0p2r"; depends=[DatabaseConnector RSQLite SqlRender]; }; EurosarcBayes = derive2 { name="EurosarcBayes"; version="1.1"; sha256="12311s6ibw9q6kykhh689r93r7mwjhwrhkzdpc75grvw6ilgjmpm"; depends=[clinfun data_table plyr shiny VGAM]; }; EvCombR = derive2 { name="EvCombR"; version="0.1-2"; sha256="1f5idjaza91npf64hvcnpgnr72mpb7y6kf91dp57xy9m14k7jx5g"; depends=[]; }; - EvalEst = derive2 { name="EvalEst"; version="2015.4-2"; sha256="1jkis39iz3zvi5yfd0arvw7bym6naq45f5cravywg8c37n9v967x"; depends=[dse setRNG tfplot tframe]; }; + EvalEst = derive2 { name="EvalEst"; version="2021.2-1"; sha256="0ws7x0dkzb3h2m801dkzx2as146whm63mcipy4iia90jd9944zir"; depends=[dse setRNG tfplot tframe]; }; EvaluateCore = derive2 { name="EvaluateCore"; version="0.1.1"; sha256="03y2sbpca11gjn94kn03y5ahamhhnwfisnpaxi23k124wq09dgch"; depends=[agricolae car cluster dplyr entropy ggcorrplot ggplot2 gridExtra kSamples psych Rdpack reshape2 vegan]; }; EvaluationMeasures = derive2 { name="EvaluationMeasures"; version="1.1.0"; sha256="0b65y4rb650hhlgc18z0sm0danrrawqkazzdl9krl877djrgx87g"; depends=[]; }; Evapotranspiration = derive2 { name="Evapotranspiration"; version="1.15"; sha256="1hvvlc8qwgal4lhlccf4dk817xgpyyiqzzlzk7w3ydnczr8pk4bk"; depends=[zoo]; }; EventDetectGUI = derive2 { name="EventDetectGUI"; version="0.3.0"; sha256="02gwgbp692cfmf933jg1f7h4gghhc1v2cswz7rpcazm8h39mc4wh"; depends=[DT EventDetectR ggplot2 plotly shiny shinyBS shinydashboard shinyjs XML]; }; EventDetectR = derive2 { name="EventDetectR"; version="0.3.5"; sha256="0wx3bcs8n95fmyc5vnlrwd75bzqqvy6czb9bsbp04g3770c5ja0r"; depends=[forecast ggplot2 gridExtra imputeTS neuralnet]; }; EventStudy = derive2 { name="EventStudy"; version="0.36"; sha256="0pd7qbpj4agaqc57lianqinnardyh929nr8ammmpal191v2i7hmw"; depends=[curl data_table dplyr ggplot2 httr jsonlite magrittr miniUI openxlsx purrr RColorBrewer readr rlang rstudioapi scales shiny stringr testthat tidyquant tidyr]; }; - EvidenceSynthesis = derive2 { name="EvidenceSynthesis"; version="0.2.2"; sha256="1jcs8r3xnigij1k86s2g9xrbgry7ls90ny07p0f86ljm2b3cyfvi"; depends=[BeastJar coda Cyclops EmpiricalCalibration ggplot2 gridExtra HDInterval meta rJava rlang survival]; }; + EvidenceSynthesis = derive2 { name="EvidenceSynthesis"; version="0.2.3"; sha256="1qx8l5fwnwigpz8b25i84h9wnqb6lclv03r251ww7j3gd7mybd76"; depends=[BeastJar coda Cyclops EmpiricalCalibration ggplot2 gridExtra HDInterval meta rJava rlang survival]; }; EviewsR = derive2 { name="EviewsR"; version="0.1.0"; sha256="1chg3g1jsdflgby2bksqw2nf27xin4nayqigxkji4zwbspp6m8ai"; depends=[knitr]; }; EvoRAG = derive2 { name="EvoRAG"; version="2.0"; sha256="0gb269mpl2hbx1cqakv3qicpyrlfb4k8a3a7whhg90masbgmh8f6"; depends=[]; }; EvolutionaryGames = derive2 { name="EvolutionaryGames"; version="0.1.0"; sha256="1v6xpxk4kbjbmv8vh517rd76gyrd9znpxqdh4jqz8lvdpnpla4wv"; depends=[deSolve geometry ggplot2 interp MASS reshape2 rgl]; }; @@ -1403,13 +1445,15 @@ in with self; { Exact = derive2 { name="Exact"; version="2.1"; sha256="0clzxgqc7a112vaw7qy66kldj7spmj4ni5fvdhwxkn54749jk388"; depends=[rootSolve]; }; ExactCIdiff = derive2 { name="ExactCIdiff"; version="1.3"; sha256="1vayq8x7gk1fnr1jrlscg6rb58wncriybw4m1z0glfgzr259103y"; depends=[]; }; ExactMultinom = derive2 { name="ExactMultinom"; version="0.1.2"; sha256="1ygsiwcsmda0pbp7lzr03sb461mr9fff7hxp1lil40y9z0xgdmmb"; depends=[Rcpp]; }; + ExamPAData = derive2 { name="ExamPAData"; version="0.3.0"; sha256="1bfhg5plnjmsk419pc3691d45zsh73m5v906nkdw5l3i6140gsqj"; depends=[]; }; ExceedanceTools = derive2 { name="ExceedanceTools"; version="1.2.2"; sha256="084sc6pggfbcyavhfnd5whyigw7dyjhb4cxmxi0kh2jiam5k8v5b"; depends=[SpatialTools splancs]; }; ExcelFunctionsR = derive2 { name="ExcelFunctionsR"; version="0.1.4"; sha256="1j3vfvfk8lp46zb6fwvq9lafk7r2qrnx4vxyhaih71c0a8g6dz9n"; depends=[lubridate plyr roperators stringr tidyr]; }; ExcessMass = derive2 { name="ExcessMass"; version="1.0"; sha256="1z8l1lja02wxw8l72s3bq6sgjymn5929n123xk6b7ndd52zlfgf5"; depends=[]; }; + ExhaustiveSearch = derive2 { name="ExhaustiveSearch"; version="1.0.1"; sha256="1wb3bf1ilml5cilm740rh8ngiybxhxg6h6nzh1rlqd6wgfp17mzh"; depends=[Rcpp RcppArmadillo]; }; ExomeDepth = derive2 { name="ExomeDepth"; version="1.1.15"; sha256="1ljswn8bimzhl7dxy7nb2jmwq9v7vpp4y1jynp8djrjpdx9wnaqi"; depends=[aod Biostrings dplyr GenomicAlignments GenomicRanges IRanges magrittr Rsamtools VGAM]; }; ExpDE = derive2 { name="ExpDE"; version="0.1.4"; sha256="0yjsap92dd1sb23fhw69i0ddk3lyj5f4kwp9rvz4k0vxry10hx7g"; depends=[assertthat]; }; - ExpDes = derive2 { name="ExpDes"; version="1.2.0"; sha256="0zisgb129fdg2igc3gp8jkrv9bz2r7bz2i20ap07mqlvhq88515a"; depends=[stargazer]; }; - ExpDes_pt = derive2 { name="ExpDes.pt"; version="1.2.0"; sha256="0fny5hcg76bm04vpbkvlwzw78m5gj28rvich7k1hhrhlxm3xi3hf"; depends=[stargazer]; }; + ExpDes = derive2 { name="ExpDes"; version="1.2.1"; sha256="05zc3118fx94m8il26riybp8skmyrawpvwfxa42bwwns0h9wa1zj"; depends=[stargazer]; }; + ExpDes_pt = derive2 { name="ExpDes.pt"; version="1.2.1"; sha256="1xnplnm7pxyda9wipr9rc6rdb433vcqdh17fi5jz9s9v2s0sdy7d"; depends=[stargazer]; }; ExpRep = derive2 { name="ExpRep"; version="1.0"; sha256="0spv3wd9c8sr338n5kdzrs28yh7s90fl70wsdnkibmlxhnh3ay3g"; depends=[]; }; ExpertChoice = derive2 { name="ExpertChoice"; version="0.2.0"; sha256="1pd4v240ywc4wzh249axxb4kz5dccizc08jdjnaygz35hjdg5hvj"; depends=[DoE_base dplyr far purrr rlist]; }; ExplainPrediction = derive2 { name="ExplainPrediction"; version="1.3.0"; sha256="14m3b9fsrpfpr8avsnhl8b3bzk2xlhwgkwag5iq8bj7bzvv4yck1"; depends=[CORElearn semiArtificial]; }; @@ -1435,7 +1479,7 @@ in with self; { FBN = derive2 { name="FBN"; version="1.5.1"; sha256="0723krsddfi4cy2i3vd6pi483qjxniychnsi9r8nw7dm052nb4sf"; depends=[]; }; FCGR = derive2 { name="FCGR"; version="1.0-0"; sha256="015nnnc9fasx0qjrc3lbxv14rqwyx36xzsw9076grwm5pqahrdsb"; depends=[kerdiest KernSmooth MASS mgcv nlme pspline sfsmisc]; }; FCMapper = derive2 { name="FCMapper"; version="1.1"; sha256="1yjh8rs65nqslvwv7x4rif469zds41s7v3vhq6pca1y17kvj2in1"; depends=[igraph]; }; - FCPS = derive2 { name="FCPS"; version="1.2.6"; sha256="13r8qv8n14g9dxmgpx1f4vc6r5mbnxs4b92gzqck49j38k5a1m77"; depends=[DataVisualizations ggplot2 mclust]; }; + FCPS = derive2 { name="FCPS"; version="1.2.7"; sha256="0rkswfz0biyag5nh4fn0i7fa40ph198bpxaxrkrfx6bbrp12qa0q"; depends=[DataVisualizations ggplot2 mclust]; }; FCSlib = derive2 { name="FCSlib"; version="1.3.0"; sha256="1191ba6dwpakcdnbcq61zm5xq24isxjnn98nmvk67fpf1ycw70w9"; depends=[bitops fields stringr tiff]; }; FD = derive2 { name="FD"; version="1.0-12"; sha256="0xdpciq14i8rh7v6mw174hip64r7mrzhx7gwri3vp9y7a1380sbi"; depends=[ade4 ape geometry vegan]; }; FDRSeg = derive2 { name="FDRSeg"; version="1.0-3"; sha256="0dh6m5vlx664kryh56jzi3zxydjwa5217nhbwn6adp0q5qdh6d8a"; depends=[Rcpp stepR]; }; @@ -1445,9 +1489,10 @@ in with self; { FDX = derive2 { name="FDX"; version="1.0.3"; sha256="1bwads0w8g2w4vb78rq6j4gy5i9f12pcb4y1l540y1acb7d1dsji"; depends=[DiscreteFDR PoissonBinomial pracma Rcpp]; }; FDboost = derive2 { name="FDboost"; version="1.0-0"; sha256="1227fda2m8lsq3cndv0xgbgbcfdxhc4fjiyj2dmha1z4sycd7a28"; depends=[gamboostLSS MASS Matrix mboost mgcv stabs zoo]; }; FENmlm = derive2 { name="FENmlm"; version="2.4.3"; sha256="1a205a4iv54haixanyzx210lzqg7cnryjvqayvkdj1lhmdql4anw"; depends=[Formula MASS numDeriv Rcpp]; }; + FER = derive2 { name="FER"; version="0.94"; sha256="0319dz0qvk8s9cfngqas3j212bw0f4rzw3gqcd7r7sl0249dla7p"; depends=[statmod]; }; FESta = derive2 { name="FESta"; version="1.0.0"; sha256="1kf5iqw8x8079gjaxicrgax5l798l8hxcc5y83l5pqh0ync5bxm6"; depends=[]; }; FEprovideR = derive2 { name="FEprovideR"; version="1.1"; sha256="02hfdk9qhaq4y19p700w2i7qsdp4z2kyww0pr0pijfivkqks0vpi"; depends=[ggplot2 Matrix poibin]; }; - FFD = derive2 { name="FFD"; version="1.0-6"; sha256="19yqb45qj54fmjkqfjbcqsx3wz6fk8inrqif9ds93xjkm6aaiqgp"; depends=[R2HTML tkrplot]; }; + FFD = derive2 { name="FFD"; version="1.0-8"; sha256="0kb654pvb0z0zpf88yc3dkd8n3qfiqjhdmv9rk5y06f2hjydn0i3"; depends=[R2HTML]; }; FFdownload = derive2 { name="FFdownload"; version="1.0.5"; sha256="0fs4bdwr9xhzlvkrjmcfkifkgqlmklp7l5297ahb7acg65h7yawn"; depends=[plyr rvest xml2 xts zoo]; }; FField = derive2 { name="FField"; version="0.1.0"; sha256="05q16v2vv64qhbnf2l66dwzmvgzyaq8vxwwdabp534bw7z7zpi8q"; depends=[]; }; FGSG = derive2 { name="FGSG"; version="1.0.2"; sha256="1r3sjhzf9gcnbcx6rqr1s555z8lcwm3fxl096md2jji336ijlk79"; depends=[]; }; @@ -1455,10 +1500,11 @@ in with self; { FHDI = derive2 { name="FHDI"; version="1.4.1"; sha256="1n1rbrqdphp0prmkili6rnpxwdb7fgwsgncllr6yxlrkr5rb76pm"; depends=[]; }; FHtest = derive2 { name="FHtest"; version="1.5"; sha256="00mql2r4f5hxhdqf27q3x9s5rz2zzakx2myym97b1w1s7c5znl4q"; depends=[interval KMsurv MASS perm survival]; }; FI = derive2 { name="FI"; version="1.0"; sha256="17qzl8qvxklpqrzsmvw4wq3lyqz3zkidr7ihxc4vdzmmz69pyh2f"; depends=[]; }; + FILEST = derive2 { name="FILEST"; version="1.1.2"; sha256="0x95in9yad93j8kbxjykz04x756i1c1cq854c220cc0l3rm3npnl"; depends=[KRIS rARPACK]; }; FIT = derive2 { name="FIT"; version="0.0.6"; sha256="1nkjms9cvigc9sjha1krzhd3nmwsfh8pi0f1plf5k8zpb773zzb2"; depends=[gglasso MASS Rcpp RcppEigen XML]; }; - FITSio = derive2 { name="FITSio"; version="2.1-0"; sha256="021xmbavigg70m96xw1bvsdasi5yj2wmafgb6xw4b09fmyv9hvjp"; depends=[]; }; + FITSio = derive2 { name="FITSio"; version="2.1-6"; sha256="1qch6z9r8h95jijjdwsi81majgacl42ryzlkn0m1wifkly9mjjrb"; depends=[]; }; FKF = derive2 { name="FKF"; version="0.1.7"; sha256="1s3qilbkmdfsxcc0vj4yv8jyh8gl9i9rq9f8xb8wiycccpzx119v"; depends=[]; }; - FKF_SP = derive2 { name="FKF.SP"; version="0.1.0"; sha256="0ni256m45fy5v7mwlfkqc3xx7z03rs069z69ifykklmshxzjwdsy"; depends=[curl mathjaxr Rdpack]; }; + FKF_SP = derive2 { name="FKF.SP"; version="0.1.2"; sha256="0np74ssq6q293mkhjag1fbbyzawlbf3pq7sdfs74b7b3dlk9450i"; depends=[curl mathjaxr Rdpack]; }; FKSUM = derive2 { name="FKSUM"; version="0.1.4"; sha256="02nicfw0wcprdg0p2p44g740j6bjf6xgzjxcvyfcbcsbr6bpjknx"; depends=[MASS rARPACK Rcpp RcppArmadillo]; }; FLAME = derive2 { name="FLAME"; version="2.0.0"; sha256="067yy0b668pj25a0jscpjb98in22048vxs249a7pa4rs2c1cyai9"; depends=[devtools dplyr glmnet gmp magrittr mice rlang tidyr xgboost]; }; FLLat = derive2 { name="FLLat"; version="1.2-1"; sha256="0306bpwp2az4x4m5sv88hlh7vs0y5isfby7lxrn2gjnk76gg6mw1"; depends=[gplots]; }; @@ -1469,12 +1515,14 @@ in with self; { FMC = derive2 { name="FMC"; version="1.0.0"; sha256="1pfqxx7slgcmw4al7i8hy59f4han6b0b7b5az7yh1mscdnghl9bj"; depends=[minimalRSD]; }; FMCCSD = derive2 { name="FMCCSD"; version="1.0"; sha256="0c50km5ba6biq9p3mycxhy00ij2gr6y5zf3q8ycq0g1mbk8ybfb7"; depends=[numDeriv orthopolynom Rcpp RcppArmadillo splines2]; }; FME = derive2 { name="FME"; version="1.3.6.1"; sha256="065y6r0cwvj1q5i3f88icdf4i47bz33hbhln42gyzqhlavvnj35f"; depends=[coda deSolve MASS minpack_lm minqa rootSolve]; }; + FMM = derive2 { name="FMM"; version="0.1.2"; sha256="1sxwkxwj8n68fvq69is9nb7n63h1csdsgdanbdpb8jzyww39h28h"; depends=[doParallel foreach iterators]; }; FMP = derive2 { name="FMP"; version="1.4"; sha256="0w11a78nz4n7zih9h00xkv7prsy9hlxphbpa7hpnbvq9r98g08qm"; depends=[]; }; FMStable = derive2 { name="FMStable"; version="0.1-2"; sha256="00viigpqfbqc4hyl9cwicbwqf2ksjak28qrqaa16jhbqz93j4fck"; depends=[]; }; FMradio = derive2 { name="FMradio"; version="1.1.1"; sha256="02d5imhagkr2cwgs6r77mbd2jg8k5ga17xp3rwaryykg2k4glacs"; depends=[Biobase expm ggplot2 MASS reshape]; }; FMsmsnReg = derive2 { name="FMsmsnReg"; version="1.0"; sha256="0d58n7lz8d6xgzvyznmhw1byshyiiwk8dc462qr18cl51p0lqnkv"; depends=[mvtnorm]; }; FNN = derive2 { name="FNN"; version="1.1.3"; sha256="0cllqlnynm5yaj4r64mqyyfc8phkb38rwssq8k8ikgfgr4jklxny"; depends=[]; }; - FOCI = derive2 { name="FOCI"; version="0.1.2"; sha256="0zgzaqiq341n8mdlr90hfxxr32p50l4yq7cs496v77d48xi7nz6v"; depends=[data_table gmp proxy RANN]; }; + FOCI = derive2 { name="FOCI"; version="0.1.3"; sha256="0iax5569a0v18j2l52mw26yimx11fqqbxj5q7jgba9jf7ylp410w"; depends=[data_table gmp proxy RANN]; }; + FORTLS = derive2 { name="FORTLS"; version="1.0.2"; sha256="0z5qb7zvgbrb52jwf59qialkc1b3qi0pp9rdsyij9wphgwi6vw06"; depends=[dbscan Distance ggvoronoi htmlwidgets lidR plotly progress raster Rcpp RcppEigen scales sp tidyr vroom]; }; FPCA2D = derive2 { name="FPCA2D"; version="1.0"; sha256="18bb90ppd9gd8pg9jxfyfkmlsaqk8w25fgaj9fk18ybm2nhsxqm6"; depends=[corpcor]; }; FPCA3D = derive2 { name="FPCA3D"; version="1.0"; sha256="1hrk9caad2s76dx59clxhia45a85khk1y2ii7955f336x55q34a5"; depends=[]; }; FPDclustering = derive2 { name="FPDclustering"; version="1.4.1"; sha256="19n6fx3fyvnlwh8w8bi8ki3wfmvzdlxl557cj3a9y1wmm3fv2drz"; depends=[cluster ExPosition mvtnorm rootSolve ThreeWay]; }; @@ -1485,19 +1533,19 @@ in with self; { FREEtree = derive2 { name="FREEtree"; version="0.1.0"; sha256="1i2liqbcg993snj5vq341mmafzhn1yrwljvx4f3kyzy0pa59k6rn"; depends=[glmertree MASS pre WGCNA]; }; FREQ = derive2 { name="FREQ"; version="1.0"; sha256="01nra30pbnqdd63pa87lcws3hnhhzybcjvx2jqyxjghn6khz47j0"; depends=[]; }; FRESA_CAD = derive2 { name="FRESA.CAD"; version="3.3.0"; sha256="069pj6x4prlzg43q9ag8dl822awz3plk5020x13fv77jmyzq6srb"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; - FRK = derive2 { name="FRK"; version="0.2.2.1"; sha256="0fjfhkv899v08419109qs1gabnc22h7a5b4z6s6fd1zk1dc4agjn"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime sparseinv]; }; - FSA = derive2 { name="FSA"; version="0.8.31"; sha256="0a5arvmabks14a52y1ydbnx52klj6dzfak10b7kfqpygbi2rc37n"; depends=[car dplyr dunn_test lmtest plotrix plyr sciplot withr]; }; + FRK = derive2 { name="FRK"; version="1.0.0"; sha256="0a2zcxzsqb38a2br8ank136hzvq8mrjcm82gds090bxnw8smk2bi"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime sparseinv]; }; + FSA = derive2 { name="FSA"; version="0.8.32"; sha256="02ksm98kd9a6b3jj3z6k99sq268r89dyq1q7mffx5zw96yv41yyj"; depends=[car dplyr dunn_test lmtest plotrix plyr sciplot withr]; }; FSAdata = derive2 { name="FSAdata"; version="0.3.8"; sha256="0i7wkz0baxcf1dv6qvc891b4ja4x65p4qicil472k6a9gcf5d4qm"; depends=[]; }; FSDAM = derive2 { name="FSDAM"; version="2020.11-18"; sha256="09l7zvmbvmbcr5pxizdhs5fn79r6cl4ic0hsz2bazdymsqv3s3nm"; depends=[kyotil reticulate]; }; FSInteract = derive2 { name="FSInteract"; version="0.1.2"; sha256="1aci1398aaz0nrl5jy6yh7xik355wf7pwngrsak4qsi94vdj05iy"; depends=[Matrix Rcpp]; }; FSK2R = derive2 { name="FSK2R"; version="0.1.2"; sha256="0baar5dg9zz89bz4f9x074qknxs296bdclipdy8m1ljzclhxpsbf"; depends=[dplyr googlesheets purrr R_utils readtext readxl rjson rlang shiny stringr tibble tidyr XML xml2 zip]; }; + FSM = derive2 { name="FSM"; version="1.0.0"; sha256="03w182a9i7mra7wpvkm4q4kwhzjs5kc9h4hh26gygl49jkcvril8"; depends=[]; }; FSMUMI = derive2 { name="FSMUMI"; version="1.0"; sha256="06ri1zi86cm4arjdlp2pha2bvcc8vz6irvd9n3ja074hv62wxcw4"; depends=[FuzzyR lsa]; }; FSSF = derive2 { name="FSSF"; version="0.1.1"; sha256="024g2rv64yqxmbbwrbkpkrzdfshl0n6jll6axsgsp4q4ia4r9401"; depends=[Rcpp RcppArmadillo]; }; FSTpackage = derive2 { name="FSTpackage"; version="0.1"; sha256="1fjqsl59fg4x9vkbv4b0qmfxlaa2q3rzpl40grv24yg6ixfagmdb"; depends=[CompQuadForm MASS Matrix mvtnorm SKAT]; }; - FSelector = derive2 { name="FSelector"; version="0.31"; sha256="1ryqrwz9h7ggxvmxyw4viajlkvd3r7i6ihcfrwsz6axyk5y0qarg"; depends=[digest entropy randomForest RWeka]; }; - FSelectorRcpp = derive2 { name="FSelectorRcpp"; version="0.3.7"; sha256="1y1hvcxs3516xf5fnzlm4hhd22i9h6cgklv2g2wbs3qph86334rl"; depends=[BH foreach iterators Rcpp RcppArmadillo testthat]; }; + FSelector = derive2 { name="FSelector"; version="0.33"; sha256="1lfra416pzpbipv9rm0qf7mq1zqr11hmas29q7qiwmzs5ihflmrx"; depends=[digest entropy randomForest RWeka]; }; + FSelectorRcpp = derive2 { name="FSelectorRcpp"; version="0.3.8"; sha256="17wcrsp2jlinj6nhnqba8iv7kk9m9hbpwv4vww5cdghflrn2zwj1"; depends=[BH foreach iterators Rcpp RcppArmadillo testthat]; }; FSinR = derive2 { name="FSinR"; version="2.0.5"; sha256="11ss38qpasbyym9hcfqmv254jvr8lzsw6r85dlm7xlnhfnxil59l"; depends=[caret class digest dplyr e1071 GA mlbench neuralnet prodlim purrr Rdpack rlang rpart tidyr]; }; - FTICRMS = derive2 { name="FTICRMS"; version="0.8"; sha256="0kv02mdmwflhqdrkhzb55si5qnqqgdadgyabqc2hwr6iccn7aq8c"; depends=[lattice Matrix]; }; FUNTA = derive2 { name="FUNTA"; version="0.1.0"; sha256="02yxz95s2hs26mfmgwhv5d54yyjz0aczjpnay8b4gpzbpd6aci61"; depends=[]; }; FWDselect = derive2 { name="FWDselect"; version="2.1.0"; sha256="0w0hkmhcz7h1lixk7p3yffbbalgxwh2lv463vqz361k80sri6wz7"; depends=[cvTools mgcv]; }; FacPad = derive2 { name="FacPad"; version="3.0"; sha256="0h7knzin0rfk25li127zwjsyz223w7nx959cs328p6b2azhgn59b"; depends=[MASS Rlab]; }; @@ -1508,10 +1556,11 @@ in with self; { FactorAssumptions = derive2 { name="FactorAssumptions"; version="1.1.2"; sha256="0k5jjqfajrq5wc0vp07s6kbfyjks6124hpy09nxw2blrai66vhcm"; depends=[MASS psych]; }; FactorCopula = derive2 { name="FactorCopula"; version="0.5"; sha256="0mqw6qwm8n2cfqz8srsynqcrki7qd98p5wmkp14i1j8c6n0i4vxd"; depends=[abind polycor statmod]; }; FactorsR = derive2 { name="FactorsR"; version="1.4"; sha256="1nw63j9bi4x09pgdvdml0w0qxfy1dda5hkxbhd3d6f7rky1z0nyf"; depends=[]; }; - Factoshiny = derive2 { name="Factoshiny"; version="2.3"; sha256="1mg1dynmxbfmagaa6fw3jg6x519nmq0vyq7bbkq4d6wiw7qykx57"; depends=[colourpicker DT FactoInvestigate FactoMineR ggplot2 ggrepel missMDA shiny shinydashboard shinyjqui]; }; + Factoshiny = derive2 { name="Factoshiny"; version="2.4"; sha256="0szdpdghaqrfjdx3c9klgww8i09dh69500sls2lyjz6c8gi80vcx"; depends=[colourpicker DT FactoInvestigate FactoMineR ggplot2 ggrepel missMDA shiny shinydashboard shinyjqui]; }; Fahrmeir = derive2 { name="Fahrmeir"; version="2016.5.31"; sha256="16fbc1zb9x9p04bl7y5nd375pha6bd3hfqqchlk1bqxrj4879y5g"; depends=[]; }; - FamEvent = derive2 { name="FamEvent"; version="2.0"; sha256="07xb1k3yxsbwxxg6avw2gvai2qpjjd1imjggr8q6lkgcd8j3yxrb"; depends=[eha kinship2 MASS pracma survival truncnorm]; }; + FamEvent = derive2 { name="FamEvent"; version="2.1"; sha256="1bwi91z8xyb3xj8fwbshgdq7l1pik2dsy6ljzwy1ymd0xz0q7f5a"; depends=[eha kinship2 MASS pracma survival truncnorm]; }; Familias = derive2 { name="Familias"; version="2.4"; sha256="1k6ig2zfkr1a4s3s85ygixmmsrb5m8vqqab8l5ffkspgjvh4dfz2"; depends=[kinship2 paramlink Rsolnp]; }; + FamilyRank = derive2 { name="FamilyRank"; version="1.0"; sha256="0v1b3a6rxbbl7xdy977j02x1ni66879x98vg6ngbaqvh7v9vl82x"; depends=[plyr Rcpp RcppArmadillo]; }; FarmSelect = derive2 { name="FarmSelect"; version="1.0.2"; sha256="174rzv9k0hdcfdkv7bisy70rip2iy0bnj3qa54i00wqwjdglgjdn"; depends=[fBasics ncvreg Rcpp RcppArmadillo]; }; FarmTest = derive2 { name="FarmTest"; version="2.2.0"; sha256="1mr2cscz3ywyq280ifaj4gypxanvvl9s7w33ysmwn952camra2md"; depends=[Rcpp RcppArmadillo]; }; FastBandChol = derive2 { name="FastBandChol"; version="0.1.1"; sha256="1hlgipn792vaylvc0r44clkjcnkns6p241a1fs8sb3gpq81naazk"; depends=[Rcpp RcppArmadillo]; }; @@ -1526,19 +1575,17 @@ in with self; { FastRCS = derive2 { name="FastRCS"; version="0.0.8"; sha256="11kqd8aii9sy65m5inxiqggyajb41iy6w92zp5wggx7pbg9m6lmy"; depends=[matrixStats Rcpp RcppEigen]; }; FastRWeb = derive2 { name="FastRWeb"; version="1.1-3"; sha256="1913pyjzxw8kw5hbr8mfwk2mjjfz7cyl6sh71z6cc0jl0af3p1kn"; depends=[base64enc Cairo]; }; FastSF = derive2 { name="FastSF"; version="0.1.1"; sha256="1xajav45h57hchzkvl2pb4mz9xy433lq74jnry0icid8dai5xhwb"; depends=[limSolve Rcpp RcppArmadillo]; }; - FatTailsR = derive2 { name="FatTailsR"; version="1.7-5"; sha256="1l2anaf4kixidmvya64ni5b78bl9w2n6xf1lnf297lkdka8gxigw"; depends=[minpack_lm timeSeries]; }; - FateID = derive2 { name="FateID"; version="0.1.9"; sha256="0n02591wpi4n0ga42v4xd1jzskcl56nvvls48sdkcnvc7cyi0hjv"; depends=[lle locfit pheatmap princurve randomForest RColorBrewer Rtsne som umap]; }; + FatTailsR = derive2 { name="FatTailsR"; version="1.8-0"; sha256="10js4vbg9f4ql2panzwb5vxzzb8qb2hl6xyx7nhindhwncga8q33"; depends=[minpack_lm timeSeries]; }; + FateID = derive2 { name="FateID"; version="0.2.0"; sha256="1nv32adblnsyb5p1p0ix74ycacmq3xzszicf8xlgz17888bxq436"; depends=[lle locfit matrixStats pheatmap princurve randomForest RColorBrewer Rtsne som umap]; }; FaultTree = derive2 { name="FaultTree"; version="0.99.5"; sha256="1sg5bidp1wv02xf828g97syh5w6ik5z8ssl7a0hd3ikvh80k4yll"; depends=[Rcpp RcppArmadillo]; }; FcircSEC = derive2 { name="FcircSEC"; version="1.0.0"; sha256="06c1n0xx1q0zh16bgylwbvqzp8q4c5bj626shm2c6r8f9kcjgysh"; depends=[Biostrings seqRFLP stringi]; }; FeaLect = derive2 { name="FeaLect"; version="1.20"; sha256="1dfi0v313x4a4ck98zlk6yr3nfjrdwr5649x9dx3i7yfkypk2k5c"; depends=[lars rms]; }; FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.4"; sha256="00yrji3grqgzg8c1hwqq5kb9xgqlnzwymy0b38cwixadc5w5lq8m"; depends=[BH digest magrittr Matrix Rcpp]; }; - FeatureImpCluster = derive2 { name="FeatureImpCluster"; version="0.1.2"; sha256="1ckzn2gylp4xvdwq19975nh3n6a6lrn4ma2qpv7q2jlir6kgwlfs"; depends=[data_table ggplot2]; }; FedData = derive2 { name="FedData"; version="2.5.7"; sha256="07qgqhd3pg86qsih1ap7j02vriwabqna974q68bapfm52qnvm77z"; depends=[curl data_table devtools dplyr foreach Hmisc httr igraph lubridate magrittr ncdf4 raster readr rgdal rgeos sf sp stringr tibble xml2]; }; FeedbackTS = derive2 { name="FeedbackTS"; version="1.5"; sha256="120labhmisw1x1bq8c4bl6l14vayvb9xcm6jsj1awacypgrr2ar2"; depends=[automap gstat mapdata maps proj4 sp]; }; - FertBoot = derive2 { name="FertBoot"; version="0.4.0"; sha256="05j387601ly3pxry99s0b8ffz7cl4wc12x4igyys958xhxzkd48a"; depends=[nls_multstart simpleboot]; }; + FertBoot = derive2 { name="FertBoot"; version="0.5.0"; sha256="168xfxpb43brfnp6c6b4chhpzb9z0aiqa6fawc8m09an5ggh05jp"; depends=[nls_multstart simpleboot]; }; Fgmutils = derive2 { name="Fgmutils"; version="0.9.5"; sha256="05n8lvx3cs1ckliaj7ni2rbfcrdl7d0pzf9bkwlyd1779h684cxz"; depends=[data_table devEMF ggplot2 gridExtra plyr png sqldf stringr]; }; - FiRE = derive2 { name="FiRE"; version="1.0"; sha256="0biy53i10yj261p3y55q7mdkd8g20smszd2dx36z1jkkfr61hy84"; depends=[BH Rcpp]; }; - FiSh = derive2 { name="FiSh"; version="1.0"; sha256="07x9z2hn5dsjmg7p6y2flanp7hnzpp2r8d994mwhc2jw5i5xqx2d"; depends=[fda_usc KernSmooth]; }; + FiSh = derive2 { name="FiSh"; version="1.1"; sha256="1fcs2y3diszypv7sr4vl75wizcxv0na0pqflmlrizs2w7kyw51p6"; depends=[fda_usc KernSmooth]; }; FieldSim = derive2 { name="FieldSim"; version="3.2.1"; sha256="1snz2wja3lsgxys0mdlrjjvk5575cyd64mjipafibwcs97bva5x1"; depends=[RColorBrewer rgl]; }; FinAna = derive2 { name="FinAna"; version="0.1.2"; sha256="09svg5z52vv90ih85awgh6ns3pqi789qjm2wi1gb9hbg9v5g7pdv"; depends=[]; }; FinAsym = derive2 { name="FinAsym"; version="1.0"; sha256="0v15ydz4sq9djwcdcfp90mk8l951rry7h91d7asgg53mddbxjj6f"; depends=[]; }; @@ -1552,7 +1599,7 @@ in with self; { FinePop = derive2 { name="FinePop"; version="1.5.1"; sha256="184707yvh2mydx42vxrdgv0n4v2dad4an7c4yvlyb9d7z6h0sw2x"; depends=[]; }; FinePop2 = derive2 { name="FinePop2"; version="0.4"; sha256="1rzsbxbxynn0pl6dlkmsjxiph403ffwlb2brsi8cm4r22jjhcx4i"; depends=[]; }; FisHiCal = derive2 { name="FisHiCal"; version="1.1"; sha256="1dds629jlja3vw2l010n1334yh3z10nijqksr0q98ckd2yrwg2rf"; depends=[igraph Rcpp RcppArmadillo]; }; - FisPro = derive2 { name="FisPro"; version="1.0"; sha256="0wj5xf8qcrbmfixmsirwaf9yl5gk0bb588csp867c8n5jnqqyq0p"; depends=[Rcpp Rdpack]; }; + FisPro = derive2 { name="FisPro"; version="1.1"; sha256="0qdig7958vavsxj64gp336b9ayhscrcxmnjxhrb4m4vyg3f8c3sn"; depends=[BH Rcpp Rdpack]; }; FishResp = derive2 { name="FishResp"; version="1.0.3"; sha256="0cydxs9knbmsyxrhqi68aqa12x20k6wcs6jw7z58k2jisypwqclw"; depends=[chron lattice mclust respirometry rMR]; }; FisherEM = derive2 { name="FisherEM"; version="1.6"; sha256="18xn0hnj5diq7falrjl04abqyyrvyzaikb9l6wh7hfhflhsd382c"; depends=[elasticnet ellipse ggplot2 MASS plyr]; }; FitAR = derive2 { name="FitAR"; version="1.94"; sha256="1mkk3kvfq4v0pdabnhbwrk31ji2mv2v6ns16xsvvr1qyg2fnx6hq"; depends=[bestglm lattice leaps ltsa]; }; @@ -1569,7 +1616,6 @@ in with self; { FlowRegEnvCost = derive2 { name="FlowRegEnvCost"; version="0.1.1"; sha256="0lw4kv4z0s23jy11y53rxxh7zxa7vajxrcnjgxd74xxs64vjlj88"; depends=[zoo]; }; FlowScreen = derive2 { name="FlowScreen"; version="1.2.6"; sha256="1s9xyrvfsgrl2zxm2an5qj3rs1qx7v7j8wc83jzl28pkwa5xr351"; depends=[changepoint evir zyp]; }; FluMoDL = derive2 { name="FluMoDL"; version="0.0.3"; sha256="0vp3w6hpph6svz8940w9yk9c5iv4n9mj94f9si1ks0xjbi948rqd"; depends=[dlnm mvmeta tsModel]; }; - Flury = derive2 { name="Flury"; version="0.1-3"; sha256="105fv9azjkd8bsb9b8ba3gpy3pjnyyyp753qhrd11byp3d0bbxy0"; depends=[]; }; FlyingR = derive2 { name="FlyingR"; version="0.2.0"; sha256="0smishimssanzssndbwh9d276sq8vdldpzb3ww9c4nlwypxjmr8z"; depends=[kableExtra knitr Rcpp rmarkdown]; }; FoReco = derive2 { name="FoReco"; version="0.1.1"; sha256="1vlys6wv2h6bdzx5c33glykbipk0dsdf431ww5vgdl6r7p0h9xqs"; depends=[cli corpcor Matrix osqp pracma]; }; ForIT = derive2 { name="ForIT"; version="1.0"; sha256="0mi2cw09mbc54s8qwcwxin2na1gfyi60cdssy2ncynma7alq3733"; depends=[]; }; @@ -1579,13 +1625,11 @@ in with self; { ForecastCombinations = derive2 { name="ForecastCombinations"; version="1.1"; sha256="07vzgm2jy992p1l9b8rsv2lbc8cbfzvql85n5ah4p4l3zjxdxgk9"; depends=[quadprog quantreg]; }; ForecastTB = derive2 { name="ForecastTB"; version="1.0.1"; sha256="1wqgw4i65ajwj8la8mgv2qqm4ydgk90i6chdkd8h33rlwh8yddc6"; depends=[circlize decomposedPSF forecast ggplot2 gridExtra imputeTestbench PSF RColorBrewer reshape2]; }; ForestDisc = derive2 { name="ForestDisc"; version="0.1.0"; sha256="1mzlrqjxsja51yyxckj4ym1vpfpq30vlhvs8clrg8jv7kz86hdwk"; depends=[moments nloptr randomForest]; }; - ForestFit = derive2 { name="ForestFit"; version="0.6.1"; sha256="1gbf1pgmqw102vp1792jls7f53ag93spkyyvk3qh1s76ag3shzac"; depends=[ars pracma]; }; - ForestGapR = derive2 { name="ForestGapR"; version="0.0.3"; sha256="1r5bcgmvdpjyq5csxcvvrm4gd4nj4hm0sn6xf6j45bm9az2v9nj8"; depends=[igraph poweRlaw raster rgeos sp spatstat VGAM viridis]; }; - ForestTools = derive2 { name="ForestTools"; version="0.2.1"; sha256="08cx8pyg2giwpf1lnq5c8s98c1srspmgcwj62rdmb69gl0yp0l1j"; depends=[APfun doSNOW foreach imager plyr progress radiomics raster rgeos sp]; }; - FormalSeries = derive2 { name="FormalSeries"; version="1.0"; sha256="09m4ifinasww0xfprs29xsrqhxxkw9zffb3919xnkkjkwp0nax4v"; depends=[]; }; + ForestFit = derive2 { name="ForestFit"; version="0.7.1"; sha256="1dzk70w2w75wwjpm5195242s2z44wg4lfr217gmzss7va8ia9dy2"; depends=[ars pracma]; }; + ForestTools = derive2 { name="ForestTools"; version="0.2.4"; sha256="0aar9997r3pg4b1ypz7cy6qgfbhly8zbjspww899r0dy247q17jq"; depends=[APfun doParallel foreach imager plyr progress raster Rcpp rgeos sp]; }; Formula = derive2 { name="Formula"; version="1.2-4"; sha256="1bsw282i5m8rlirbhz7hqvf25zbxschk7yrp152whbzdnmry6w6b"; depends=[]; }; ForwardSearch = derive2 { name="ForwardSearch"; version="1.0"; sha256="0yd47832piqxzjxgl7bc8pn0c8f7vbgsm9z6894rzyi615kjl70b"; depends=[robustbase]; }; - FossilSim = derive2 { name="FossilSim"; version="2.1.1"; sha256="1dffk14lszq84k61s1jar658qpjc1hm6rwa1gcwwvppvxj6gkvky"; depends=[ape TreeSim]; }; + FossilSim = derive2 { name="FossilSim"; version="2.2.0"; sha256="0q3p2linl30h136gyygl2pg0gs47s6lmb39llbaq7cpq52saxaks"; depends=[ape TreeSim]; }; FourScores = derive2 { name="FourScores"; version="1.5.1"; sha256="1la9d1hfcmi0zg58yl0a7nj36giagh0fwrc7wxyqdq0c7zf1hfzq"; depends=[]; }; FourgameteP = derive2 { name="FourgameteP"; version="0.1.0"; sha256="15yn47737768fkjjv8ykc9lw7x58pq44k90d9d4c9hp20zw5f3by"; depends=[]; }; FrF2 = derive2 { name="FrF2"; version="2.2-2"; sha256="048awbsyzpjmr0kmz3k5yi5vksa9iiffabp6q8xsww097vcngxzb"; depends=[DoE_base igraph scatterplot3d sfsmisc]; }; @@ -1606,27 +1650,28 @@ in with self; { FusionLearn = derive2 { name="FusionLearn"; version="0.1.1"; sha256="0n8bj7k2r2vf0v2nsw31k75hzkqj5l4hyfnmvid102hx9cl8hv3y"; depends=[]; }; Fuzzy_p_value = derive2 { name="Fuzzy.p.value"; version="1.1"; sha256="13h6armh9g57zqxyjqk6mq81jlfqxqrg2sb5p9rrhslka5m01zis"; depends=[FuzzyNumbers]; }; FuzzyAHP = derive2 { name="FuzzyAHP"; version="0.9.5"; sha256="02sx32vlvnr0fzw8rf0f6hiikqn7xp1ibpqzxhxwv8yij2qkiyci"; depends=[MASS]; }; - FuzzyLP = derive2 { name="FuzzyLP"; version="0.1-5"; sha256="1achmsc107b26d266q0vmip8vi3qaa5z0p183z2fjdm7zh9ch6ag"; depends=[FuzzyNumbers ROI ROI_plugin_glpk]; }; + FuzzyLP = derive2 { name="FuzzyLP"; version="0.1-6"; sha256="0k1cqyswhzp31dq91xigirkqhw3imkx68n4vasyvrgq6fm97dl1n"; depends=[FuzzyNumbers ROI ROI_plugin_glpk]; }; FuzzyMCDM = derive2 { name="FuzzyMCDM"; version="1.1"; sha256="0ss0s65mm6j0nax4mb9g668d9n9cgl0l016mc3h9hbjxfpqrbkks"; depends=[RankAggreg]; }; FuzzyNumbers = derive2 { name="FuzzyNumbers"; version="0.4-6"; sha256="1zba28kmzpcza099k1ck7aqn7ms2fh3ijcn05xdimvssjbhsag81"; depends=[]; }; FuzzyNumbers_Ext_2 = derive2 { name="FuzzyNumbers.Ext.2"; version="3.2"; sha256="0gldq0bg1p1vmrn35prha44d7lyymz0jzshdyp2c5rx433mny7h5"; depends=[FuzzyNumbers]; }; - FuzzyR = derive2 { name="FuzzyR"; version="2.3"; sha256="0y22924vhvybiwhsfl3svizk4sgrvg4a8wl30b5kb2c0vjv03ad6"; depends=[plyr shiny]; }; + FuzzyQ = derive2 { name="FuzzyQ"; version="0.1.0"; sha256="1camdw7rnzf02nqjlmkr7mqpc38dafq9nw8x7pzwi1lh5xwv5dia"; depends=[cluster]; }; + FuzzyR = derive2 { name="FuzzyR"; version="2.3.1"; sha256="0qwswa9m3z64cqvhqk8c194b1mr7rzjk59i94kb8lbxdg4y8gagb"; depends=[plyr shiny]; }; FuzzySTs = derive2 { name="FuzzySTs"; version="0.2"; sha256="0zs1pyn9apysspxa0glqc96h6npmvvhiqvqpcm0brslz0b6xnilp"; depends=[FuzzyNumbers polynom]; }; FuzzyStatProb = derive2 { name="FuzzyStatProb"; version="2.0.4"; sha256="1jpqb8xczi1d4g306vrwpi02f9h59aki1pgnckvfmiclr306prpb"; depends=[DEoptim FuzzyNumbers MultinomialCI]; }; FuzzyStatTra = derive2 { name="FuzzyStatTra"; version="1.0"; sha256="1ijrlnlmq9d5ahgrpzba6kzkaq1zq59zqdgcizybsf9alsswcm00"; depends=[]; }; FuzzyToolkitUoN = derive2 { name="FuzzyToolkitUoN"; version="1.0"; sha256="104s45mmlam67vwpshhpns2mgwvmhnbj8w1918jyk2r5mqibwz06"; depends=[]; }; G1DBN = derive2 { name="G1DBN"; version="3.1.1"; sha256="015rw3bpz32a8254janddgg1ip947qgcvmiwx5r3v7g8n854bwxn"; depends=[igraph MASS]; }; G2Sd = derive2 { name="G2Sd"; version="2.1.5"; sha256="165i6x2k56vwhk5p2p5m9vjmp9flblsapjdlz7nw9b719l6xz5zk"; depends=[ggplot2 reshape2 rJava shiny xlsx xlsxjars]; }; - GA = derive2 { name="GA"; version="3.2"; sha256="1v3mdbzcqhlclmj9bz94qcmxwznwwp8v5pb20clacgja6nwh3867"; depends=[cli crayon foreach iterators Rcpp RcppArmadillo]; }; + GA = derive2 { name="GA"; version="3.2.1"; sha256="0banxd81pnrcacf2shsfbf3zsb4agnna0asxh3dnz1x2p5qdk55l"; depends=[cli crayon foreach iterators Rcpp RcppArmadillo]; }; GABi = derive2 { name="GABi"; version="0.1"; sha256="1zmiaqbd1jrpiz9hk16s8rggcpl3xyyhjkkdliymx2p42vy5b5mf"; depends=[hash]; }; GACFF = derive2 { name="GACFF"; version="1.0"; sha256="0lhjzb6cj8838dh4423929z7bwpa6cv3dn84rccwi3382vsq9g2c"; depends=[]; }; GAD = derive2 { name="GAD"; version="1.1.1"; sha256="0lyrw0d7i7yn1wkqlbf3rg3dnijfwsjn3kdbsg19hmvwq6qpsak2"; depends=[matrixStats R_methodsS3]; }; GADAG = derive2 { name="GADAG"; version="0.99.0"; sha256="1ycg48idrq2yrk1fxs16yl5wwg3kbfki8xppmh311rrzf75c6z4g"; depends=[igraph MASS Rcpp RcppArmadillo]; }; - GADMTools = derive2 { name="GADMTools"; version="3.8-1"; sha256="02rqpvqawk0y8w20d89cbdbjlmpyvvp826gzzdajqba1wazj6ikx"; depends=[classInt dplyr ggmap ggplot2 ggspatial gridExtra jsonlite lattice maptools prettymapr raster RColorBrewer rgdal rgeos rosm sf sp stringr]; }; + GADMTools = derive2 { name="GADMTools"; version="3.8-2"; sha256="0894268yfbspwhp06wqhnwr09y26z75qbw2c85dk0k506zpbjc8y"; depends=[classInt dplyr ggmap ggplot2 ggspatial gridExtra jsonlite lattice maptools prettymapr raster RColorBrewer rgdal rgeos rosm sf sp stringr]; }; GAIPE = derive2 { name="GAIPE"; version="1.0"; sha256="04iarbwxrhn48bk329wxis7ifzndi67kpjx6dcakawkh3g2mzsfz"; depends=[]; }; - GALLO = derive2 { name="GALLO"; version="1.1"; sha256="1jx8y2ph3jmsx9y7y3r1ap5aybqy7zdk43jpnvcfamzv0q5v8mf0"; depends=[circlize data_table doParallel dplyr DT dynamicTreeCut foreach ggplot2 lattice magick RColorBrewer rtracklayer stringr unbalhaar]; }; + GALLO = derive2 { name="GALLO"; version="1.2"; sha256="068cb8v3hb9asn4x2vfgzqvd6ygbivj8206h6is35wvz14pphml5"; depends=[circlize data_table doParallel dplyr DT foreach ggplot2 lattice RColorBrewer rtracklayer stringr unbalhaar webshot]; }; GAMens = derive2 { name="GAMens"; version="1.2.1"; sha256="1z10wxcg277fra2lch464l0kb02lspw9qr1i2wmq11wcz0k9qnl8"; depends=[caTools gam mlbench]; }; - GANPA = derive2 { name="GANPA"; version="1.0"; sha256="0ia8djv46jm397nxjrm9yc5gacf1r4z0ckiliz57cbrqwh7z2wpa"; depends=[GANPAdata]; }; + GANPA = derive2 { name="GANPA"; version="1.1"; sha256="19nq1nlpb1lr2b9i5ckyl5m6daalrqkpx386r6i25qfvaywxl2bf"; depends=[GANPAdata]; }; GANPAdata = derive2 { name="GANPAdata"; version="1.0"; sha256="0mhdadl7zgsacn59ym42magg3214k1xhabwn78fv7kgccszcgc86"; depends=[]; }; GARCHIto = derive2 { name="GARCHIto"; version="0.1.0"; sha256="1rh9da9gb1krxasx1apldns5k3wl2xjjqc8bidsd5c0h5jlqdvr6"; depends=[Rsolnp]; }; GARCOM = derive2 { name="GARCOM"; version="1.2.0"; sha256="1fgr03gw86fjrj6hx32qvl6jsc6ax9i1ss4bbfmi8iz2f1nq43wi"; depends=[data_table vcfR]; }; @@ -1634,23 +1679,25 @@ in with self; { GAabbreviate = derive2 { name="GAabbreviate"; version="1.3"; sha256="0cq6bg3w0ji44rsz1p4j17fk0jg8rafbjixwi3fjdndc3yd874r5"; depends=[GA psych]; }; GAparsimony = derive2 { name="GAparsimony"; version="0.9.4"; sha256="1p1s5q1basy9v3jy1qxpx5g8mzpkwdfarxmmf7s06c6wq0dl9vp8"; depends=[foreach iterators]; }; GB2 = derive2 { name="GB2"; version="2.1"; sha256="06rcck97pdm1rsb02cy0jd9fknv0mz5jwk364gsaahdk56ddk18a"; depends=[cubature hypergeo laeken numDeriv survey]; }; - GB2group = derive2 { name="GB2group"; version="0.2.0"; sha256="185am9j88f3qjv0h8ag91x8qrck4qk0a4k0mcg5k56rf2lf7s7zi"; depends=[GB2 ineq minpack_lm numDeriv]; }; + GB2group = derive2 { name="GB2group"; version="0.3.0"; sha256="1dbyc7izyggfrsq2gj7rwff5qjyy6bx6ip09xvbj73xqczv8fkcd"; depends=[GB2 ineq minpack_lm numDeriv]; }; GBJ = derive2 { name="GBJ"; version="0.5.3"; sha256="12lsddkcxz37hn2fvjq158wb1bc6b3hx6wj8q8nj21zpmyl3n2qh"; depends=[BH mvtnorm Rcpp SKAT]; }; + GBcurves = derive2 { name="GBcurves"; version="0.1.2"; sha256="0s633dsd5wl3wzf893j3cqrlici1g4g355z66vppsb3xc3s8aaxc"; depends=[curl functional httr magrittr readxl rvest xml2 xts]; }; GCAI_bias = derive2 { name="GCAI.bias"; version="1.0"; sha256="10092mwpmfbcga0n39a0i6g8xxch8xiwg15cckipw6yxjyx0sivc"; depends=[]; }; GCD = derive2 { name="GCD"; version="4.0.7"; sha256="1259z76hajapzzq75fas2sq19r0wapn1ybghdaqdc6dksifdz6fv"; depends=[raster]; }; GCPM = derive2 { name="GCPM"; version="1.2.2"; sha256="0k2ng78bk3bxpj6nz80j5cvjd56zjz328ga68vyyc3hvdjgpspqj"; depends=[Rcpp RcppProgress]; }; - GCSM = derive2 { name="GCSM"; version="0.1.0"; sha256="05fyjdchnls4aikhwis3v691vsvxf657f9jf55a61ilvn59552q5"; depends=[Rcpp RcppArmadillo]; }; + GCSM = derive2 { name="GCSM"; version="0.1.1"; sha256="0apz1wh6nfpg2gyx12xnbdb3hjyrrpwlcrh5khn6cxhxm06q9l95"; depends=[Rcpp RcppArmadillo]; }; GCalcium = derive2 { name="GCalcium"; version="1.0.0"; sha256="0r84qmdsqsgpaqr08imh48mdvy26s2b62hi0hxxwhr9kg7qvj0rd"; depends=[caTools dplyr]; }; GCalignR = derive2 { name="GCalignR"; version="1.0.3"; sha256="0fq5jglgbw2cqm4pa7x4lczqjr1w65ddnhzlr2i97skzk0gcdlr5"; depends=[ggplot2 pbapply readr reshape2 stringr tibble]; }; - GD = derive2 { name="GD"; version="1.9"; sha256="00sagb5hxxpgvbycbf86kw7nf0wvxcbam9ni8nlp7asjkmkpv5zq"; depends=[badger]; }; + GD = derive2 { name="GD"; version="1.10"; sha256="1sy77yxnwh2n48zahh498v30nl3hivrsmyp0jf3gyyzhxm8z1n5l"; depends=[badger]; }; GDAdata = derive2 { name="GDAdata"; version="0.93"; sha256="13ks97i289rc4i7gpqrifwbj0m9rx8csjhnfg8mad10qmjwz7p8b"; depends=[]; }; - GDAtools = derive2 { name="GDAtools"; version="1.5"; sha256="1xya99dqzb9mgkw7h7aj592ya36j1hai8j8zgy1dpmpfxwsbjd6y"; depends=[FactoMineR ggplot2 ggrepel moreparty nleqslv nnet RColorBrewer rlang]; }; + GDAtools = derive2 { name="GDAtools"; version="1.6"; sha256="0m2h37a4szi6cq9ivljs7v22n7hilbwp7ppvqrz6jfv8baz6rfw3"; depends=[FactoMineR ggplot2 ggrepel MASS nleqslv nnet RColorBrewer rlang wdm]; }; GDELTtools = derive2 { name="GDELTtools"; version="1.2"; sha256="1rx6kjh7kmyycqapvbizcxkcfp09qvqv7k8f25v333sxkacpz6p5"; depends=[plyr TimeWarp]; }; GDINA = derive2 { name="GDINA"; version="2.8.0"; sha256="0chxnhp37xfd78gafkgwqrmc0jf3pvpdyrkc438kl0l53fb7dld7"; depends=[alabama ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp shiny shinydashboard]; }; - GE = derive2 { name="GE"; version="0.1.6"; sha256="17wwyjzsp2hxc8g3xziwfxqm4df2pngw6dwcqxaljlav10li0s3r"; depends=[CGE data_tree DiagrammeR]; }; + GE = derive2 { name="GE"; version="0.1.8"; sha256="0v35f3aqw67pr1igjzilnz9zbi3w7p12v3g0lbbnrn03j5xaqngl"; depends=[CGE data_tree DiagrammeR]; }; GEEaSPU = derive2 { name="GEEaSPU"; version="1.0.2"; sha256="02pwjqd94kranc1f69bx9rzk27kchavhvhl9fygjhrr40nwq3pbg"; depends=[gee Rcpp RcppArmadillo]; }; GEEmediate = derive2 { name="GEEmediate"; version="1.1.3"; sha256="1xprkpjp1pkq4ci1n32d3yy80hx3r4xf2j7f6hv7dvsn4cvdp417"; depends=[gee]; }; - GENEAclassify = derive2 { name="GENEAclassify"; version="1.5.1"; sha256="0xwvq0vbv2a9r7r0kcn1a32r6d2kgxz3cxnrclq4b4kwrdc8n7nn"; depends=[changepoint GENEAread MASS rpart signal]; }; + GEInter = derive2 { name="GEInter"; version="0.3.0"; sha256="09pbg7izifw6d44y4mhbqh9dmfbzqd3kx4b3hanwsr7rzcc1ijy3"; depends=[ggplot2 Hmisc MASS pcaPP quantreg reshape2 survAUC survival]; }; + GENEAclassify = derive2 { name="GENEAclassify"; version="1.5.2"; sha256="1rddzf1qdi2xslb7qbrb60940ccq6a17wzsbmvwl2wliv183xhwm"; depends=[changepoint GENEAread MASS rpart signal]; }; GENEAread = derive2 { name="GENEAread"; version="2.0.9"; sha256="00whn2xqlcdcgmrifng04j2csxynfb1dmj9wkx981ylz13jsnwm9"; depends=[bitops mmap]; }; GENEAsphere = derive2 { name="GENEAsphere"; version="1.5.1"; sha256="1kgj7i9v2yn0b8lvvsf0nc6lg3i2syrcygwa51pcrzp57vv7hxn5"; depends=[GENEAread ggplot2 MASS misc3d rgl]; }; GENLIB = derive2 { name="GENLIB"; version="1.0.9"; sha256="1ch3wz3y6p6z0rs9b3877iihvp0ycha062ajzf2fhxgjzgf0v5d1"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; }; @@ -1658,46 +1705,50 @@ in with self; { GEOmap = derive2 { name="GEOmap"; version="2.4-4"; sha256="0wk2v0fwcwcm59k711fg829h2w58wkd36im4mg974iai6mqif7qh"; depends=[fields MBA RPMG splancs]; }; GESE = derive2 { name="GESE"; version="2.0.1"; sha256="0h3s2sbnv5wilr2mj6bnl2892p16pxrs341gg6jql1a540p669sk"; depends=[kinship2]; }; GESTr = derive2 { name="GESTr"; version="0.1"; sha256="1q12l2vcq6bcyybnknrmfbm6rpzcmxgq2vyj33xwhkmm9g2ii9k6"; depends=[gtools mclust]; }; - GET = derive2 { name="GET"; version="0.2-1"; sha256="0jzl6yf9ljjsr5k8y71qjr8w2a5gcnrlhiirzcm9wc1h6hchbmqp"; depends=[ggplot2 gridExtra viridisLite]; }; + GET = derive2 { name="GET"; version="0.2-4"; sha256="15vn970jsx1iysrx5bva0zbhhlzsjcz62651pply095jkn4z5mdg"; depends=[ggplot2 gridExtra viridisLite]; }; GEVACO = derive2 { name="GEVACO"; version="1.0.0"; sha256="0rslnxqbj1pbbnp849pdn6l9dyfib9w19a1q3fw7kdjfir76gk6a"; depends=[nlme RLRsim]; }; GEVcdn = derive2 { name="GEVcdn"; version="1.1.6-2"; sha256="0vmm9fhyrk5m0zwy7fpq5j9zinws0gn2saf4j9plqc9gj1gphjn0"; depends=[]; }; GEint = derive2 { name="GEint"; version="0.1.5"; sha256="179gpq4qjhgx1fhyjdb80rf2ip80zhhfyn8xjgwq1a425163q1y7"; depends=[bindata geepack mvtnorm nleqslv pracma rje speedglm]; }; GExMap = derive2 { name="GExMap"; version="1.1.3"; sha256="1a6i2z9ndgia4v96nkr77cjqnbgxigqbqlibg82gwa0a6pl7r7nz"; depends=[Biobase multtest]; }; GFA = derive2 { name="GFA"; version="1.0.3"; sha256="10sivsqxliwcrp0ay3n2my28zki6f8vpv8i9lbld8qinx1iv2mq3"; depends=[]; }; GFD = derive2 { name="GFD"; version="0.2.9"; sha256="1q60n2l00vm5v0wl9zk780lhvh294fqmvcfgch37zm3lyr9zllvh"; depends=[magic MASS Matrix plotrix plyr]; }; + GFDsurv = derive2 { name="GFDsurv"; version="0.0.2"; sha256="0fp701whhfy3f994wcqy48wdly85r8zvn76anr3yxqnywi1kkwxi"; depends=[gridExtra magic MASS plyr shiny shinyjs shinythemes shinyWidgets survival survminer tippy]; }; GFE = derive2 { name="GFE"; version="0.1.0"; sha256="0ywrg23z13kp8ggw4wbm4jvr2rvb6kra7ma0mgfj8xzkrxs6vi6m"; depends=[data_table dplyr TeachingSampling]; }; GFGM_copula = derive2 { name="GFGM.copula"; version="1.0.4"; sha256="0cw8ih9dj86cvks0qcpffzjx8lv6qiwvk3f1wri8zashj8lk9am6"; depends=[cmprsk compound_Cox joint_Cox]; }; + GFisher = derive2 { name="GFisher"; version="0.1.0"; sha256="1k5ik1q78gy2x0qr15shdr9rry93dh68876l6ifh21ppqw3y1x9j"; depends=[Matrix mvtnorm]; }; GGClassification = derive2 { name="GGClassification"; version="0.1"; sha256="03wis5ng2mnfhp33xrag8xbmvjagzr1909a6x94wv7s2spji00rp"; depends=[Rcpp RcppEigen]; }; GGEBiplotGUI = derive2 { name="GGEBiplotGUI"; version="1.0-9"; sha256="0nd0ky3m1avy82z48g7hcysq0y0agxjxdn0g624dkm2w99avxw3j"; depends=[rgl tkrplot]; }; GGEBiplots = derive2 { name="GGEBiplots"; version="0.1.1"; sha256="1xnxaylikjd378flw3rqw36z27b2limkmyad97zhf1cbva317d1b"; depends=[gge GGEBiplotGUI ggforce ggplot2 scales]; }; - GGIR = derive2 { name="GGIR"; version="2.2-0"; sha256="1zqlc49d5ydrz7qj59j7a0yqdvmikicslskxki8fybzdbxn65cya"; depends=[bitops data_table doParallel foreach GENEAread matlab Rcpp signal tuneR unisensR zoo]; }; + GGIR = derive2 { name="GGIR"; version="2.3-0"; sha256="1m4l2l6x3xjs0ar9yn1raws3d2bid5sxgp71z75lkppcdzbqpwh2"; depends=[bitops data_table doParallel foreach GENEAread matlab Rcpp signal tuneR unisensR zoo]; }; GGMncv = derive2 { name="GGMncv"; version="2.0.0"; sha256="1h1h2qx784f41ihmylj8zxhcxcd67r10qpz5938iynnr04mjm6l0"; depends=[ggplot2 glassoFast MASS mathjaxr numDeriv Rcpp RcppArmadillo Rdpack reshape]; }; + GGMnonreg = derive2 { name="GGMnonreg"; version="1.0.0"; sha256="1bhqk172ddc7xq1hqj1i6q8np6jvmf2xypvd8kp3w1bcsafsbms8"; depends=[bestglm corpcor doParallel foreach GGally GGMncv ggplot2 MASS Matrix network poibin psych Rdpack sna]; }; GGMridge = derive2 { name="GGMridge"; version="1.1"; sha256="0zbfvvp7l836m118m8nmdvw1w7xq6d3b7qirskjsq1dkk23j41hs"; depends=[MASS mvtnorm]; }; GGMselect = derive2 { name="GGMselect"; version="0.1-12.4"; sha256="0p9djnkclnk64bcrd66agi2gw2j3bqvqhamfm0h59b810kh50kbn"; depends=[gtools lars mvtnorm]; }; - GGUM = derive2 { name="GGUM"; version="0.4-1"; sha256="09f4vha23z915fn8nj7wj4ry1m7ifqfqig1gbn0vx6kwg1d03whq"; depends=[abind psych Rdpack viridis xlsx]; }; - GGally = derive2 { name="GGally"; version="2.0.0"; sha256="1gkmpzh1yvwvypkw0nwqv3gsf6za3220wig3rfv8g23kss60rl1s"; depends=[ggplot2 gtable lifecycle plyr progress RColorBrewer reshape rlang scales]; }; + GGRidge = derive2 { name="GGRidge"; version="0.1.0"; sha256="1q5lgnzbhczfylkj2p07r2a088i0d2xgmggilwlg6b0gc9qg7xf8"; depends=[CVglasso graph gRbase MASS]; }; + GGUM = derive2 { name="GGUM"; version="0.4-2"; sha256="0v6h09aj47qwylqybqvpr5rb0saam4fpbplzb4f3a1qfqd5b1k0g"; depends=[abind psych Rdpack viridis xlsx]; }; + GGally = derive2 { name="GGally"; version="2.1.1"; sha256="0lly659kd43cnz1bmmzqj6dbf4v0nm8dhj8xq2wlv9qbnfhq5r9p"; depends=[dplyr forcats ggplot2 gtable lifecycle plyr progress RColorBrewer reshape rlang scales tidyr]; }; GHS = derive2 { name="GHS"; version="0.1"; sha256="1khjfy62a67r59s2rax9mmnqy5xnnwhbydzhqwwmyspl48mxycdj"; depends=[MASS]; }; GHap = derive2 { name="GHap"; version="2.0.0"; sha256="0br9civfdlksn5xmyrvz2y0knikcd2i175kddxjdqmiyyayckc8w"; depends=[class data_table e1071 lme4 Matrix]; }; GIFTr = derive2 { name="GIFTr"; version="0.1.0"; sha256="101vr2qasky8hnxp5i3lhlnymwzciypqwvhpl6mrr0r0czgpcz2f"; depends=[glue stringr]; }; GIGrvg = derive2 { name="GIGrvg"; version="0.5"; sha256="0mx4n4kf34343yiww80fw5yy0x624xsj71n8fr4dm0a2338pxq8v"; depends=[]; }; GISTools = derive2 { name="GISTools"; version="0.7-4"; sha256="06alb5d2k4qj344i9cpgm3lz9m68rkmjqfx5k2hzn7z458xjrlxs"; depends=[maptools MASS RColorBrewer rgeos sp]; }; GInSARCorW = derive2 { name="GInSARCorW"; version="1.15.6"; sha256="0rpq8ng9skxg6qzhainsc9jkznql6glq65a1bdbrkc6pwx3pc7lc"; depends=[circular raster rgdal rgeos sp]; }; - GJRM = derive2 { name="GJRM"; version="0.2-3"; sha256="0hmryv66qlj8kzm5d0fh1qjr7gzfy99dh73fy8knv7ph0l2lc6x6"; depends=[copula distrEx evd gamlss_dist ggplot2 ismev magic matrixcalc matrixStats mgcv mnormt numDeriv psych Rmpfr scam survey survival trust trustOptim VGAM VineCopula]; }; + GJRM = derive2 { name="GJRM"; version="0.2-4"; sha256="0bzwbdil0jyabwpmj00clnahszip13w53ydgzm1q7kyk2nfs2z88"; depends=[copula distrEx evd gamlss_dist ggplot2 ismev magic matrixcalc matrixStats mgcv mnormt numDeriv psych Rmpfr scam survey survival trust trustOptim VGAM VineCopula]; }; GK2011 = derive2 { name="GK2011"; version="0.1.3"; sha256="13vafhbgcsj485f12qv962y07v3hil3pla51vkl2b030amzy86jv"; depends=[]; }; GLDEX = derive2 { name="GLDEX"; version="2.0.0.7"; sha256="1w5ahwbnz9xsn3rdxzcxxvc6m5cgq46nln3i5v8vp4imrs8aafb3"; depends=[cluster]; }; GLDreg = derive2 { name="GLDreg"; version="1.0.7"; sha256="1wjrr4x1k0fz8nx9idb4ysamldypriiypj96b5v028lx38jwsk3l"; depends=[ddst GLDEX]; }; GLIDE = derive2 { name="GLIDE"; version="1.0.2"; sha256="1z5h8br6aig24g5gsh8h6npm269id3h5gjjyf5avs4v08b51rpcv"; depends=[doParallel foreach MASS]; }; - GLMMRR = derive2 { name="GLMMRR"; version="0.2.0"; sha256="0s3jfh720acfmbadilq2c6gql3yifsbijpmw1jkzbsdc87pqi1db"; depends=[lattice lme4]; }; - GLMMadaptive = derive2 { name="GLMMadaptive"; version="0.7-15"; sha256="1nshqmwa1imlx0h5nsw69d8lw4bj5gdxdxccfh7h0f12q505yjgl"; depends=[MASS matrixStats nlme]; }; + GLMMRR = derive2 { name="GLMMRR"; version="0.5.0"; sha256="072zwi1rs6d84iszn09v5g19bkpla19nfqk4pq40ad8368zkbhcm"; depends=[lattice lme4 RColorBrewer]; }; + GLMMadaptive = derive2 { name="GLMMadaptive"; version="0.8-0"; sha256="1jp8mp4xgx23nh54m6xi67qmmggf8y4fpz010r106kvwlzczshsr"; depends=[MASS matrixStats nlme]; }; GLMaSPU = derive2 { name="GLMaSPU"; version="1.0"; sha256="0zx2bza5v5cfp9v7hf42s57522b6prawcwl77aa3kvjcnb0ish6g"; depends=[MASS mnormt mvtnorm Rcpp RcppArmadillo]; }; - GLMcat = derive2 { name="GLMcat"; version="0.1.0"; sha256="102yydldnggklx8dw1slm5pdf1c798j8a8pg1rc0mw42yvn75zs8"; depends=[BH Rcpp RcppEigen]; }; + GLMcat = derive2 { name="GLMcat"; version="0.2.1"; sha256="0flmi4gpvcfr7w16h2xikclkcyca085br8awj6w2grkb7mpvpih1"; depends=[BH Rcpp RcppEigen]; }; GLMpack = derive2 { name="GLMpack"; version="0.1.0"; sha256="15bpw42y999ljdw8ka2ysrrm0y73xz37wwi3j67i01wafipq82xy"; depends=[AER censReg effects foreign lme4 lmtest MASS Matrix nnet pBrackets plm pscl sandwich]; }; GLMsData = derive2 { name="GLMsData"; version="1.0.0"; sha256="12q41zxniblzys20vjrf5skj8cbzlwb92mwk6jvnyd86lc70bsh1"; depends=[]; }; GLSME = derive2 { name="GLSME"; version="1.0.5"; sha256="18gixzg8b8yql91dhv8xsrcrxdix0kr0qgmiva0hwmyzpsn6rqam"; depends=[corpcor mvtnorm]; }; GMAC = derive2 { name="GMAC"; version="3.0"; sha256="0c2cfpr8dik7j5br87hkvswrhqzj5vcna54gw6ffdf1rk9rz9j22"; depends=[]; }; GMCM = derive2 { name="GMCM"; version="1.4"; sha256="13ds8da7lqkvm1mz75440hmn9smi9pznb8bknmckg8vd3fc70f6x"; depends=[ellipse Rcpp RcppArmadillo]; }; GMDH = derive2 { name="GMDH"; version="1.6"; sha256="093glyz73246m5f2xb2xgbgi80haj4fanmr325byr99dnf4x35yn"; depends=[MASS]; }; - GMDH2 = derive2 { name="GMDH2"; version="1.5"; sha256="0y132zc8q4daj4856xikp4xvrqcibmn9r2shnmwpwxnfbik2ikfb"; depends=[e1071 glmnet magrittr MASS nnet plotly randomForest xtable]; }; + GMDH2 = derive2 { name="GMDH2"; version="1.6"; sha256="0zc1xvg3f3cdspr1d2lx60n93hhnqrp7653gf27krknf9dmsf5zg"; depends=[e1071 glmnet magrittr MASS nnet plotly randomForest xtable]; }; GMDHreg = derive2 { name="GMDHreg"; version="0.2.1"; sha256="1rav4xhli8gy27sa5zh3lvpgz6zpff37783z1k23n0xf4n0h61nh"; depends=[]; }; GMKMcharlie = derive2 { name="GMKMcharlie"; version="1.1.1"; sha256="1adra4qjq0xriyg08zyh9f99x1sry59kmvrissb0kssaqs4r7gk9"; depends=[Rcpp RcppArmadillo RcppParallel]; }; GMMAT = derive2 { name="GMMAT"; version="1.3.1"; sha256="0p1wl9wppddggn0hrxmhy3jbw42n9h52jjwijjha5zmhjjlr665b"; depends=[CompQuadForm foreach Matrix Rcpp RcppArmadillo SeqArray SeqVarTools]; }; @@ -1705,10 +1756,10 @@ in with self; { GMPro = derive2 { name="GMPro"; version="0.1.0"; sha256="0xhja221wz89cm76qbq01nqz73jx7d2zx9i2ky5vd31zkspmlqkm"; depends=[combinat igraph transport]; }; GMSE = derive2 { name="GMSE"; version="0.6.0.4"; sha256="1q3laiyrkps9v51hlhyvmam9a5a1djmxkgjl562p46fszk1hm17n"; depends=[shiny shinydashboard shinyjs]; }; GMSimpute = derive2 { name="GMSimpute"; version="0.0.1.0"; sha256="1hmn5ss81df9j9ibgibs95j98irqzif94vq0c861mq4a65y59fcp"; depends=[ggplot2 glmnet reshape2]; }; - GMZTests = derive2 { name="GMZTests"; version="0.1.3"; sha256="0crvgjx47fbv3lnc7h8ra8x04yr9gz4nppn9z7j4860qpwr8f890"; depends=[DCCA fgpt fitdistrplus nonlinearTseries PerformanceAnalytics tseries]; }; + GMZTests = derive2 { name="GMZTests"; version="0.1.4"; sha256="0a5rc9xc0rm97gf3m87x00hj11i6n3ygss4h57iia2hiqr76faak"; depends=[DCCA fgpt fitdistrplus nonlinearTseries PerformanceAnalytics tseries]; }; GNAR = derive2 { name="GNAR"; version="1.1.1"; sha256="1ryiv671nhhhif8xqj8lx6jfh503ayqvldnmzkwfma2ww1518y08"; depends=[igraph wordcloud]; }; GNE = derive2 { name="GNE"; version="0.99-3"; sha256="11pk9w4xj27dyfn05bna99xqdb89wp0ljl798d5dyk5fcnhh7217"; depends=[alabama BB nleqslv SQUAREM]; }; - GNRS = derive2 { name="GNRS"; version="0.1.0"; sha256="05iclnrdcp4i6h8lfkw4dbkl0qmm814rvb621ypq4w5r4g96h72r"; depends=[jsonlite RCurl rjson]; }; + GNRS = derive2 { name="GNRS"; version="0.2.0"; sha256="14iwvcknx86v1dz19blg0z3bfg4cshjha4n83js3lr6nfvy2s5h6"; depends=[jsonlite RCurl]; }; GNSSseg = derive2 { name="GNSSseg"; version="6.0"; sha256="1zkj98xh63wfyyygg2ahq3m54xlvi3x9sy0rhcn2dlfvbxaxfl4k"; depends=[capushe robustbase]; }; GOFShiny = derive2 { name="GOFShiny"; version="0.1.0"; sha256="04m08d9w8qqbql86c18qpnwym7agry8wspfwrnbbyp52h2pn2gxb"; depends=[rhandsontable rmarkdown shiny]; }; GOGANPA = derive2 { name="GOGANPA"; version="1.0"; sha256="1xbir21zvr5hv2y6nndzpsrpmnr7glrc7y6xgcyb856wx46ajan9"; depends=[GANPA WGCNA]; }; @@ -1717,8 +1768,8 @@ in with self; { GOxploreR = derive2 { name="GOxploreR"; version="1.1.0"; sha256="1a3333d94xrj8iavn2yawgb8x296ilji3drcwwvrjs7v7rib0k5f"; depends=[annotate biomaRt dplyr ggnetwork ggplot2 GO_db gontr igraph network]; }; GPArotation = derive2 { name="GPArotation"; version="2014.11-1"; sha256="15jh5qqqwx47ara6glilzha87rnih0hs5fsz0jjqwv6wr1gw26rm"; depends=[]; }; GPCMlasso = derive2 { name="GPCMlasso"; version="0.1-4"; sha256="1ff49549cxrylicqgmf1b4gdqqhj8lk5fw0rzyni8ip970bfbkw9"; depends=[caret cubature ltm mirt mvtnorm Rcpp RcppArmadillo statmod TeachingDemos]; }; - GPFDA = derive2 { name="GPFDA"; version="2.2"; sha256="1xqk03g8b8hi1vdqh6a9wml8ln0ad6lmy14z8k8c4wdc5kbzdr0b"; depends=[fda fda_usc MASS spam]; }; - GPGame = derive2 { name="GPGame"; version="1.1.0"; sha256="00qiqd7p84k22wbmlmj8a81fy5m5rl6afhj2q61j0akicnbzjfw9"; depends=[DiceDesign DiceKriging GPareto KrigInv MASS mnormt mvtnorm Rcpp]; }; + GPFDA = derive2 { name="GPFDA"; version="3.1.1"; sha256="1yivqyk8wlrpfxpnqdjkyzbbykfpmk5qg7cy6kxv469fhadccybc"; depends=[fda fda_usc fields interp mgcv Rcpp RcppArmadillo]; }; + GPIC = derive2 { name="GPIC"; version="0.1.0"; sha256="1v44hkzf3wh09j5pcfmsc8h5jzmqa501bwkmdwwjb7pz64976r23"; depends=[]; }; GPL2025 = derive2 { name="GPL2025"; version="1.0.1"; sha256="0af42g3v91fbcmla2yq98v8rd4ifaznb1xvw7ny41r3843d8appc"; depends=[dplyr]; }; GPLTR = derive2 { name="GPLTR"; version="1.2"; sha256="0b4s090jlp2qpqqr0b1ifwyf2fal156y7vg9mjkw53y623ms5pix"; depends=[rpart]; }; GPM = derive2 { name="GPM"; version="3.0.1"; sha256="01vd68w5pnwhng83x5i0k9c5fhsn9siyzzndkvkmpis4mjm42sgv"; depends=[doParallel foreach iterators lattice lhs pracma randtoolbox Rcpp RcppArmadillo]; }; @@ -1731,15 +1782,15 @@ in with self; { GPoM = derive2 { name="GPoM"; version="1.3"; sha256="1c870dfbpswx78n4s1v6zy0l1qknrs9335af0z01v1miyrmi95gd"; depends=[deSolve float rgl]; }; GPoM_FDLyapu = derive2 { name="GPoM.FDLyapu"; version="1.0"; sha256="1hpgiwh7b50gazp1msjsh2840b91wfrxhl2l45lxg6jr1m34q8pj"; depends=[deSolve GPoM]; }; GPrank = derive2 { name="GPrank"; version="0.1.4"; sha256="06j5fk427jkp5lphqlx48vfp4fagnxxnv4iyjcha8nvkswcblwgy"; depends=[gptk matrixStats RColorBrewer tigreBrowserWriter]; }; - GPvam = derive2 { name="GPvam"; version="3.0-5"; sha256="0inhhx5ll4ybkwp71ijigxlyxsa0rdyxb38kgfgxb588dsk4scjz"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; + GPvam = derive2 { name="GPvam"; version="3.0-7"; sha256="1kpz9v2yvinzchmq4cbb5hshihr7lkgwi5dnyxilg5qalbk7bwbk"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; GPvecchia = derive2 { name="GPvecchia"; version="0.1.3"; sha256="1rabini84r5fvl630wkcikjzll89mamc6pqiilvcmsik5c6ymz3w"; depends=[BH fields FNN GpGp Matrix Rcpp RcppArmadillo sparseinv]; }; GRANBase = derive2 { name="GRANBase"; version="2.6.20"; sha256="0z9378qimdpxrslib2avimik3xqd41angfg12j8vmcbg7zh3binh"; depends=[covr desc dplyr GRANCore htmlTable jsonlite markdown RCurl sendmailR stringi switchr]; }; GRANCore = derive2 { name="GRANCore"; version="0.2.7"; sha256="0xnm7jb2s4ag4qvsfs1fq0f2ikvfqm3bvxhj8kmmxwynwl5pw287"; depends=[switchr]; }; GRAPE = derive2 { name="GRAPE"; version="0.1.1"; sha256="1jzvf45ch8x8f2x9kmvv02xz9bix5vplh8143vc4m1yyq42x09c6"; depends=[]; }; GRCdata = derive2 { name="GRCdata"; version="1.0"; sha256="0nshii6kfvffncgcrmm7wvniq94j9djj84jikcb6ck49viikkrky"; depends=[cubature nloptr]; }; GREMLINS = derive2 { name="GREMLINS"; version="0.2.0"; sha256="0wdqikz6k5d2cxcb347lhy7rj54blgf1m4sjv64zd4nx6c4r0ai8"; depends=[aricode blockmodels igraph mclust pbmcapply R6]; }; - GROAN = derive2 { name="GROAN"; version="1.2.0"; sha256="14n3k1wwz5pn82wcj00cdns4bp699f58k1nj8hp8jn0q7xr2sgv5"; depends=[plyr rrBLUP]; }; - GRPtests = derive2 { name="GRPtests"; version="0.1.0"; sha256="1l03rr20xbl6gdj8k3rmmj13basnbmkl80hphldcnmg5iklyqyha"; depends=[glmnet MASS randomForest RPtests]; }; + GROAN = derive2 { name="GROAN"; version="1.2.1"; sha256="07419rpd6492gwzn3lgxl37hdfama7wpzni1gj7dy8bvhn8l1m2a"; depends=[plyr rrBLUP]; }; + GRPtests = derive2 { name="GRPtests"; version="0.1.2"; sha256="12w0vskf1n31zspk3vjgdlhrjwpsysvwwr0l0vm57j6faqc31i3s"; depends=[glmnet MASS randomForest ranger RPtests]; }; GRS_test = derive2 { name="GRS.test"; version="1.1"; sha256="1ap9453rj5zan6c3ix7jb1qxhxh42bfv295dgqbgjpdygjdlbm6n"; depends=[]; }; GRTo = derive2 { name="GRTo"; version="1.3"; sha256="1xkcx2agvrpfnmplgaqx70vz303v8rhwnxdyr4hmdlf4h92lbv8i"; depends=[bootstrap]; }; GSA = derive2 { name="GSA"; version="1.03.1"; sha256="05x9wspah1cdznjpncqam1iawsxdiigyl8v2anyhss2k7wwd94p1"; depends=[]; }; @@ -1747,12 +1798,12 @@ in with self; { GSAQ = derive2 { name="GSAQ"; version="1.0"; sha256="1p1rab2dlh4h9bfg464nhx708p7kc4q01ifccdh5756lq1qh2kzv"; depends=[]; }; GSAfisherCombined = derive2 { name="GSAfisherCombined"; version="1.0"; sha256="1xhq5nc3kbz3ml9qkdxm6m0c65fybabfhgqlwii2105jl0ll7qy5"; depends=[]; }; GSAgm = derive2 { name="GSAgm"; version="1.0"; sha256="18bhk67rpss6gg1ncaj0nrz0wbfxv7kvy1cxria083vi60z0vwbb"; depends=[edgeR survival]; }; + GSDA = derive2 { name="GSDA"; version="1.0"; sha256="1knzibpazyl0mp3c34hak634q4fb5cp250skkwgba92hj7hfhwvq"; depends=[msigdbr]; }; GSE = derive2 { name="GSE"; version="4.2"; sha256="0vrxn6j5brhwd38zqnr6m3in3hp1xfs1mfhps9qsj20d4w8d1rf9"; depends=[cellWise ggplot2 MASS Rcpp RcppArmadillo robustbase rrcov]; }; GSED = derive2 { name="GSED"; version="2.5"; sha256="0hz7rn0j62gy7bv67dxqpfdq86zv3yqhl9pwafcism94636h8vrj"; depends=[memoise R_utils rootSolve survival]; }; - GSIF = derive2 { name="GSIF"; version="0.5-5.1"; sha256="1nc177f200m3wfppmdh9cf6g2npx87c0mz2g17zdrw5crx688i8d"; depends=[aqp dismo gstat plotKML plyr raster rgdal RSAGA scales sp]; }; GSM = derive2 { name="GSM"; version="1.3.2"; sha256="04xjs9w4gaszwzxmsr7657ry2ywa9pvpwpczpvinxi8vpj347jbb"; depends=[gtools]; }; GSMX = derive2 { name="GSMX"; version="1.3"; sha256="1n1d7rixj14ari46snsmi48qfmy00ihmzvayk3hkrp2d2d0xi2gh"; depends=[MASS]; }; - GSODR = derive2 { name="GSODR"; version="2.1.2"; sha256="0kppdg0si05mfg6rn1zl9q6slq9287fad9hprkc5a462ns2d1hag"; depends=[countrycode curl data_table future_apply httr R_utils]; }; + GSODR = derive2 { name="GSODR"; version="3.1.0"; sha256="0ry91nwwbarzgq2xgvlvy91ihq463bvdq7mxms6am7agi8lkvf9p"; depends=[countrycode curl data_table httr R_utils]; }; GSSE = derive2 { name="GSSE"; version="0.1"; sha256="034mmxa6kjq5kgikhb5q75viagz5ck9irrjbxm26zq9099qxm13b"; depends=[Iso zoo]; }; GSelection = derive2 { name="GSelection"; version="0.1.0"; sha256="052vh1haxlzbh3c5i24nrwphapik1y8ribmh6q4axd447ggc0ff9"; depends=[gdata penalized SAM]; }; GSparO = derive2 { name="GSparO"; version="1.0"; sha256="0xna2crxqwy8fj0s79rxbdcaz9x912rp1vdwqv1557fsnmfv2yf0"; depends=[ggplot2 ThreeWay]; }; @@ -1760,34 +1811,35 @@ in with self; { GUILDS = derive2 { name="GUILDS"; version="1.3"; sha256="0zl6x0vn93ybps63fqazvd93f2zwdq0rqqrp7d6n5rnamx99mm8d"; depends=[pracma Rcpp]; }; GUIProfiler = derive2 { name="GUIProfiler"; version="2.0.1"; sha256="10m4d7f2rhw6cmkrnw3jh4iqlkfphf4v7mpfwzw17laq0ncmsx5r"; depends=[graph MASS Nozzle_R1 proftools Rgraphviz rstudioapi]; }; GUTS = derive2 { name="GUTS"; version="1.1.1"; sha256="05njlykhxs62k5cjrfwgbqyckbvf2jxjshg3avf6vhwwf58qyjq9"; depends=[Rcpp]; }; - GUniFrac = derive2 { name="GUniFrac"; version="1.1"; sha256="1vgij7c9b0afl5wzwcn0pjdvn8gqz2jxk5q0gchd9zk1qd10a1vl"; depends=[ape matrixStats vegan]; }; + GUniFrac = derive2 { name="GUniFrac"; version="1.2"; sha256="05nmdxrkcxg9674kb2lm640yl0d5hd0fzrnl61nwl2k8dfs8n8fx"; depends=[ape Matrix matrixStats vegan]; }; GVARX = derive2 { name="GVARX"; version="1.3"; sha256="00iqwkshp1i9338x9khh8hyszad6150qb11jlvky5fm488wcw1y3"; depends=[lmtest lubridate sandwich strucchange tsDyn urca vars xts]; }; GWASExactHW = derive2 { name="GWASExactHW"; version="1.01"; sha256="19qmk8h7kxmn9kzw0x4xns5p3qqz27xkqq4q6zmh4jzizd0fsl78"; depends=[]; }; GWASbyCluster = derive2 { name="GWASbyCluster"; version="0.1.7"; sha256="0ivlkxbh8m23vbnjfmhk0vfczd5b8lzy9w4gm1m6jpvdm40kn70x"; depends=[Biobase limma rootSolve snpStats]; }; GWASinlps = derive2 { name="GWASinlps"; version="1.2"; sha256="036lv8f58kz6qdwaviyk1q1qsgcj9cimipq1cjrfpn8snkn7s1gh"; depends=[horseshoe mombf speedglm]; }; - GWASinspector = derive2 { name="GWASinspector"; version="1.4.8.2"; sha256="10kd09rijlwib9ssfgn8mkql1wqwhvp823iw1qi0mnwv2ilrsmxi"; depends=[data_table futile_logger ggplot2 gridExtra hash ini kableExtra knitr R_utils rmarkdown RSQLite]; }; + GWASinspector = derive2 { name="GWASinspector"; version="1.5.2"; sha256="13biq6mln2nwddvzy5ng45wbdpa0r98ydr5ra42vx1aw0d1f96wd"; depends=[data_table futile_logger ggplot2 gridExtra hash ini kableExtra knitr R_utils rmarkdown RSQLite]; }; GWEX = derive2 { name="GWEX"; version="1.0.2"; sha256="0iykciifbskcrx1qv4874nxli1sq6nbmlfinq4ksir3p93y7ds87"; depends=[abind doParallel EnvStats fGarch foreach lmomco MASS mvtnorm nleqslv Renext]; }; GWG = derive2 { name="GWG"; version="1.0"; sha256="1va0cd229dhhi1lmrkpwapcm96hrdmxilrmba02xnl7ikhisw0my"; depends=[]; }; + GWI = derive2 { name="GWI"; version="1.0.2"; sha256="0gwbidvdzk7b1w880baa338h7cikvlzvqmbmdxca4r83jzzwxlj1"; depends=[]; }; GWLelast = derive2 { name="GWLelast"; version="1.2.2"; sha256="1nm4w5m4ca6npmpvh9nb0cnrbzlyv95nvvhgs3pqcrw4igagm4hj"; depends=[doParallel foreach geosphere glmnet sp spgwr]; }; GWRM = derive2 { name="GWRM"; version="2.1.0.3"; sha256="16ahlf1pbcpgha50a7ml2c336by50r287kihwshiazshifi5p3n3"; depends=[doParallel foreach]; }; - GWSDAT = derive2 { name="GWSDAT"; version="3.0.5"; sha256="1j68jyp3528apdi5nb6m4a04x5lf0k1krfg3vmc7r31ylk71q0jm"; depends=[deldir digest geometry Kendall lattice lubridate MASS Matrix officer raster readxl rhandsontable sf shiny shinycssloaders shinydashboard shinyjs sm sp splancs zoo]; }; - GWmodel = derive2 { name="GWmodel"; version="2.2-2"; sha256="01lagyqns2kd5myw4x9amk5ayjfqvqvw2mzhqkzjij7vhldj4asf"; depends=[FNN maptools Rcpp RcppArmadillo robustbase sp spacetime spatialreg spdep]; }; + GWSDAT = derive2 { name="GWSDAT"; version="3.0.6"; sha256="18zih271mfp4b0xcz3fnsqw5jnzzm8x87cinp9pch6zrc5alv6ka"; depends=[deldir digest geometry Kendall lattice lubridate MASS Matrix officer raster readxl rhandsontable sf shiny shinycssloaders shinydashboard shinyjs sm sp splancs zoo]; }; + GWmodel = derive2 { name="GWmodel"; version="2.2-5"; sha256="1winrlhx171xa3i18brd2mmrrd6q2nr296wxzwmc4y236vfzgy8i"; depends=[FNN maptools Rcpp RcppArmadillo robustbase sp spacetime spatialreg spdep]; }; GWnnegPCA = derive2 { name="GWnnegPCA"; version="0.0.4"; sha256="1yinzlp22z9z5fk9f1nm14i408yfm5kfgkn3pqnh4bkghs569ivg"; depends=[geodist nsprcomp pracma sf sp spData]; }; - GWpcor = derive2 { name="GWpcor"; version="0.1.5"; sha256="0ci8fjp3k3vpyq83z1vgi23cfc1n5vr757rjbxg7rbnqn43g9dfl"; depends=[corpcor doParallel dplyr foreach geodist pracma sf sp]; }; + GWpcor = derive2 { name="GWpcor"; version="0.1.6"; sha256="1plh7m1gj2gh3lkprj1gfqag1dggkhnvz73pr0gp6w3qqhdk0qdh"; depends=[corpcor doParallel dplyr foreach geodist pracma sf sp]; }; GWsignif = derive2 { name="GWsignif"; version="1.2"; sha256="0bss5s3ijnlckz44p7jj49bn2r8nwqckpzwzcv0vci915q8jfsj2"; depends=[]; }; GaDiFPT = derive2 { name="GaDiFPT"; version="1.0"; sha256="15fnj1w30h0zdj032f3js0bbb1qlyk4b54a4aclykwzicqdgalkg"; depends=[]; }; GameTheory = derive2 { name="GameTheory"; version="2.7"; sha256="0vb7sjia5s58gw9zpkzddps8knxvbrz7fbi3m6digl8bf5vwhxxw"; depends=[combinat gtools ineq kappalab lpSolveAPI]; }; GameTheoryAllocation = derive2 { name="GameTheoryAllocation"; version="1.0"; sha256="0733vmyr0d9scjd5ixpnggr548snd7nj70knf5hbzc59nmbc5y11"; depends=[e1071 lpSolveAPI]; }; Gammareg = derive2 { name="Gammareg"; version="3.0"; sha256="1wh5k3nazycki0h094m4d0nnign8yksgnrrnrm3yka1s7mqzv781"; depends=[]; }; - GapAnalysis = derive2 { name="GapAnalysis"; version="1.0.1"; sha256="0j39181iqi65sxi3isl3l42m9yvmwxhwz0pczvcrb45qfs9knh33"; depends=[data_table dataverse fasterize geosphere raster rmarkdown sf sp tmap]; }; - GauPro = derive2 { name="GauPro"; version="0.2.2"; sha256="127agnhqbbavcf7sx0zq1c8ldh3w1d1iz5bpd1ixxkyaapmiq4qy"; depends=[lbfgs R6 Rcpp RcppArmadillo]; }; + GauPro = derive2 { name="GauPro"; version="0.2.4"; sha256="1fll93r25293xdwv28g9my627f736kawr0ji1vxfc3q275zfy7lg"; depends=[lbfgs R6 Rcpp RcppArmadillo]; }; GaussianHMM1d = derive2 { name="GaussianHMM1d"; version="1.0.1"; sha256="1j1cwh0p7czy2l4qf6nymqcp8kkfaki0j2rj8p99nqn2vgc3vcax"; depends=[doParallel foreach]; }; GeDS = derive2 { name="GeDS"; version="0.1.3"; sha256="1ddq4hnyl3m3s4cchccxiqphi742ljcm86zqpa01a5nrjbnr87x6"; depends=[Matrix Rcpp Rmpfr]; }; GeNetIt = derive2 { name="GeNetIt"; version="0.1-4"; sha256="1z9h3prlf5r7ks0ys4wy0i5i3giaplqmngsqwxllsy70jjb9s90h"; depends=[exactextractr nlme raster rgeos sf sp spdep]; }; GenAlgo = derive2 { name="GenAlgo"; version="2.2.0"; sha256="1pihqxif2v62hwf5761fshyhigcjmlgbvp2j7immxlsysjfw5xgq"; depends=[ClassDiscovery MASS oompaBase]; }; GenBinomApps = derive2 { name="GenBinomApps"; version="1.1"; sha256="1w6k02bkawk7la7yjj8xby8w2a303gfk18xz08c7gka9a3m1lxqx"; depends=[]; }; - GenEst = derive2 { name="GenEst"; version="1.4.5"; sha256="176yzgd4xbiypr0w0bywsld2zz7c7bg6c94mk3i7jdvl5csw2ghl"; depends=[corpus DT gsl gtools hellno htmltools htmlwidgets lubridate MASS matrixStats mvtnorm Rcpp shiny shinyjs survival]; }; + GenEst = derive2 { name="GenEst"; version="1.4.5.1"; sha256="17rcg4dzhi3mg9b34a7bdbjrb0xnms735nb4ngcqa6pzdkafd33f"; depends=[corpus DT gsl gtools hellno htmltools htmlwidgets lubridate MASS matrixStats mvtnorm Rcpp shiny shinyjs survival]; }; GenForImp = derive2 { name="GenForImp"; version="1.0"; sha256="1wcvi52fclcm6kknbjh4r9bpkc2rg8nk6cddnf5j8zqbvrwf4k5x"; depends=[mvtnorm sn]; }; + GenHMM1d = derive2 { name="GenHMM1d"; version="0.1.0"; sha256="0liqfjx17xs8si15yrb4032ac33ibxn2xm010b244gfhl1wr2ar5"; depends=[actuar doParallel EnvStats extraDistr foreach ggplot2 matrixcalc reshape2 rmutil ssdtools VaRES VGAM]; }; GenKern = derive2 { name="GenKern"; version="1.2-60"; sha256="12qmd9ydizl7h178ndn25i4xscjnrssl5k7bifwv94m0wrgj4x6c"; depends=[KernSmooth]; }; GenOrd = derive2 { name="GenOrd"; version="1.4.0"; sha256="17mfrj1fwj8mri1w0bl2pw1rqriidmd67i7gpn9v56g9dzw5rzms"; depends=[MASS Matrix mvtnorm]; }; GenSA = derive2 { name="GenSA"; version="1.1.7"; sha256="03xqwxm7v7rnihx730a4p65dfwhjh4345r3d78y0qxxplk8d76cx"; depends=[]; }; @@ -1795,15 +1847,16 @@ in with self; { GenWin = derive2 { name="GenWin"; version="0.1"; sha256="0jm537i4jn3azdpvd50y9p0fssfx2ym2n36d3zgnfd32gqckz3s4"; depends=[pspline]; }; GeneBook = derive2 { name="GeneBook"; version="1.0"; sha256="1cg8zyr7rbshj3shhzkrxs910dsz4brhh51jvn2qzipzd8dbvxiv"; depends=[dplyr repmis stringr svDialogs]; }; GeneClusterNet = derive2 { name="GeneClusterNet"; version="1.0.1"; sha256="1xi4c041c4m39f9wb5fklgmhi6ng78iwzzqch5xk9hx5blq6zd4m"; depends=[G1DBN igraph MASS]; }; - GeneCycle = derive2 { name="GeneCycle"; version="1.1.4"; sha256="0pivwfjz1plfhwz7k2c33k6p0pa1014d80qsrk8ig9yqqqlyhy1z"; depends=[fdrtool longitudinal MASS]; }; + GeneCycle = derive2 { name="GeneCycle"; version="1.1.5"; sha256="08pr8xgcznm04c4lhvzv2qnzij5vj7pjzyj9pr1pqpmc977h8dvg"; depends=[fdrtool longitudinal MASS]; }; GeneF = derive2 { name="GeneF"; version="1.0"; sha256="0bizf47944b2zv9ayxb9rhrqx0ilz2xlvkw7x5vbg7l67y2g2l4d"; depends=[]; }; GeneNet = derive2 { name="GeneNet"; version="1.2.15"; sha256="11ba6ahsk3x9alvcw8bai2bpg84ki1m8nadrjjdhjg65svhw8njm"; depends=[corpcor fdrtool longitudinal]; }; GeneralOaxaca = derive2 { name="GeneralOaxaca"; version="1.0"; sha256="19j5c5xr6mdb6pmih94wbjas4yh0dmsqfggg8clvdxkpwk0h338v"; depends=[boot]; }; GeneralisedCovarianceMeasure = derive2 { name="GeneralisedCovarianceMeasure"; version="0.1.0"; sha256="02s1wbsdp5ma4pnmcsdl5dwm156zx12d3n1ypzkc33lxg21ashzj"; depends=[CVST kernlab mgcv xgboost]; }; GeneralizedHyperbolic = derive2 { name="GeneralizedHyperbolic"; version="0.8-4"; sha256="01gqfvmzfslhxdnigzbl3rd55hk6r0kgd8fm9xjl0kb9vmb735lm"; depends=[DistributionUtils MASS]; }; - GeneralizedUmatrix = derive2 { name="GeneralizedUmatrix"; version="1.2.1"; sha256="0dbrm0cfnvp38jkvcc0ib77bjqng9p1czbd2d1i4pdrnwb64xdx6"; depends=[ggplot2 Rcpp RcppArmadillo]; }; + GeneralizedUmatrix = derive2 { name="GeneralizedUmatrix"; version="1.2.2"; sha256="055q0rspjw5yin0kia6gcax89cfdmgvgvj1zjh4iswfs48n9xdcj"; depends=[ggplot2 Rcpp RcppArmadillo]; }; GeneticSubsetter = derive2 { name="GeneticSubsetter"; version="0.8"; sha256="0bd4snv3dwabc7mknmd2rjmffj67xq535x0bycajhd83d1jhjars"; depends=[]; }; GenoScan = derive2 { name="GenoScan"; version="0.1"; sha256="0p98imfvvz7l94kim3pxypyjs2pbxng4a2nagbafbady82ylr2vi"; depends=[data_table MASS Matrix seqminer SKAT]; }; + GenomeAdmixR = derive2 { name="GenomeAdmixR"; version="2.1.1"; sha256="1c8d2s13hibwymxxra2gbma78d44zx9cbwm4901iz1prdn4p8vl6"; depends=[ggplot2 ggridges hierfstat Rcpp RcppArmadillo RcppParallel rlang stringr tibble vcfR]; }; GenomicMating = derive2 { name="GenomicMating"; version="2.0"; sha256="02v1pkarmardf7g8hf2n4jj4cq4707g5lcc7gnwsiyyh7pknd1y6"; depends=[dplyr emoa kohonen LowRankQP magrittr plotly qtl Rcpp RcppArmadillo scatterplot3d SOMbrero]; }; GenomicTools = derive2 { name="GenomicTools"; version="0.2.9.7"; sha256="196shxbrcgiwaa7aav2aipsbj1smrkbhinn44aw9qfvz2x9zdz0m"; depends=[circlize data_table GenomicTools_fileHandler gMWT Rcpp RcppArmadillo snpStats stringr]; }; GenomicTools_fileHandler = derive2 { name="GenomicTools.fileHandler"; version="0.1.5.9"; sha256="09l87wf78bj49cdh7r3x81hn15c4pihxih8l59xxrpgdhp69268c"; depends=[data_table snpStats]; }; @@ -1815,10 +1868,11 @@ in with self; { GeoTcgaData = derive2 { name="GeoTcgaData"; version="0.2.4"; sha256="03m669vy0yj9rj524dkrgkqyhjzwc0xckm3zd1272a48jyc1jywd"; depends=[data_table]; }; GeodRegr = derive2 { name="GeodRegr"; version="0.1.0"; sha256="1wr2n1lkn42vix9jfpw1k7y70lvl3qbqzm0kzvq6yyxnl30sirgs"; depends=[zipfR]; }; GeomComb = derive2 { name="GeomComb"; version="1.0"; sha256="05xb6m2ciszxd13yhqdkildh9nsq19ss8885ngj6ynvbchqkii7r"; depends=[forecast ForecastCombinations ggplot2 Matrix mtsdi psych]; }; - GermaParl = derive2 { name="GermaParl"; version="1.5.2"; sha256="1046zglr72xvv2jfyilrzv5isch867rxg33iq56b5jn8xr3b6780"; depends=[cli cwbtools zen4R]; }; - GerminaR = derive2 { name="GerminaR"; version="2.0.1"; sha256="0d8waa20s0l56ckns2za5vgcny4r75lhb12jy32hq4nv5fh8krh6"; depends=[agricolae dplyr ggplot2 gtools purrr shiny tibble tidyr]; }; - GetBCBData = derive2 { name="GetBCBData"; version="0.5"; sha256="1i5b5sawa8ngjp1afm1grm9hbmkhd5pcwqagkamlihsrmsvcdffn"; depends=[curl dplyr furrr future jsonlite lubridate memoise purrr RCurl readr stringr]; }; - GetDFPData = derive2 { name="GetDFPData"; version="1.5.3"; sha256="1l2zhay8r16pwmprjmvk4agr0l1ysbvvf99abcihvd1i117ixarq"; depends=[curl dplyr lubridate readr reshape2 stringr tibble xlsx XML]; }; + GerminaR = derive2 { name="GerminaR"; version="2.1.1"; sha256="0am5ga4szk7xk2jkzn8djlg0chsk32ng96bgkk3v9k4gj1jm64ar"; depends=[agricolae dplyr DT ggplot2 purrr shiny tibble tidyr]; }; + GetBCBData = derive2 { name="GetBCBData"; version="0.6"; sha256="0dwkps7396rkk5fsh8ynl1l9465s6zm5mind16a5y2n8swi2ndyk"; depends=[curl dplyr furrr future jsonlite lubridate memoise purrr RCurl readr stringr]; }; + GetDFPData = derive2 { name="GetDFPData"; version="1.6"; sha256="1yxf1i5bipz16pbydl6qxlalh2zpdiigbxd1qczbjc1z78bl5727"; depends=[crayon curl dplyr lubridate readr reshape2 stringr tibble xlsx XML]; }; + GetDFPData2 = derive2 { name="GetDFPData2"; version="0.5"; sha256="0grriq5a6n36gbb24cwajrm3971dqvc0ascdgych9wqdj23c3gjr"; depends=[curl dplyr lubridate magrittr memoise purrr RCurl readr rvest shiny stringr tidyr writexl xml2]; }; + GetFREData = derive2 { name="GetFREData"; version="0.6"; sha256="00p8d3ssi51ayrm8jkjgd2jabvgwdpdxkyspamvnczb7yy3csmp8"; depends=[curl dplyr lubridate magrittr memoise purrr readr rvest stringr tidyr XML xml2]; }; GetLattesData = derive2 { name="GetLattesData"; version="1.4"; sha256="129hnhmw8aw81whyj3g7npwgmg4fmvsji9h2xfg78nrp0abjxijv"; depends=[curl dplyr readr stringdist stringr XML]; }; GetQuandlData = derive2 { name="GetQuandlData"; version="0.1.0"; sha256="1g1as4m853ab1wp57rzqm0552g0vm7kxzypibv0xywc85084pnmc"; depends=[dplyr jsonlite memoise purrr readr scales stringr]; }; GetR = derive2 { name="GetR"; version="0.1"; sha256="1b2wirhz4nhvmf863czwb8z8b42ilsyjjrg9rc4nd9b7nz50bmjg"; depends=[party]; }; @@ -1826,7 +1880,6 @@ in with self; { GetoptLong = derive2 { name="GetoptLong"; version="1.0.5"; sha256="00fpm6nd3kqa2ikasxa62jzywi46fvvmx1mdavcp5yrxxn37j8wc"; depends=[crayon GlobalOptions rjson]; }; Ghat = derive2 { name="Ghat"; version="0.1.0"; sha256="1w5agphnbngc0ldb3gbgh4b8ww956lf31bfyxw2zp56crx4akcxf"; depends=[rrBLUP]; }; Ghost = derive2 { name="Ghost"; version="0.1.0"; sha256="0anrb1n3f3jnq2p0dgqzw5a0gby2slafv2bybgy5gm3f9fsj831w"; depends=[R6]; }; - GiANT = derive2 { name="GiANT"; version="1.3.1"; sha256="0788c7yxbi804c2r05hf5dys9lnr961zs835w7siprgwbvnv6apn"; depends=[]; }; GiNA = derive2 { name="GiNA"; version="1.0.1"; sha256="0his7wsgnggyv9526blxzxa1ni8hwq2ws64wkmha45nvvnm3dsiw"; depends=[doParallel EBImage foreach png]; }; GiRaF = derive2 { name="GiRaF"; version="1.0.1"; sha256="1m19jxr6h485v32iqq260cizf30cgrx3pk802r73fbp3ssj7nmvh"; depends=[BH Rcpp RcppArmadillo]; }; GibbsACOV = derive2 { name="GibbsACOV"; version="1.1"; sha256="1ikcdsf72sn1zgk527zmxw3zjhx0yvkal6dv001cgkv202842kll"; depends=[MASS]; }; @@ -1835,73 +1888,70 @@ in with self; { GillespieSSA2 = derive2 { name="GillespieSSA2"; version="0.2.7"; sha256="1kggacjfklzbclyncbxrlk97x0di2vfm2z9sl63hlfdn1vy3gvid"; depends=[assertthat dplyr dynutils Matrix purrr Rcpp RcppXPtrUtils readr rlang stringr tidyr]; }; GiniDistance = derive2 { name="GiniDistance"; version="0.1.0"; sha256="0jq1dwpsvh3k25lawvzf9ij72jsspzyqsbnrphz8aqwi1dkm3851"; depends=[energy randomForest Rcpp RcppArmadillo readxl]; }; GiniWegNeg = derive2 { name="GiniWegNeg"; version="1.0.1"; sha256="1wqwjalsyp55si839cil6na3khigm0mwn6qkg0kjylq10pabfk2a"; depends=[]; }; - GlmSimulatoR = derive2 { name="GlmSimulatoR"; version="0.2.3"; sha256="05s4dhfv2vg2y0947c8p1hfy9dj0s3vr40gmk96l9jjglh742rsk"; depends=[assertthat cplm dplyr ggplot2 magrittr MASS purrr statmod stringr tweedie]; }; + GlmSimulatoR = derive2 { name="GlmSimulatoR"; version="0.2.4"; sha256="1f24wkqxpdh4rfdhc4xh5jzbczqaib5nkvq4a6gx9wzw1ssdhpnd"; depends=[assertthat cplm dplyr ggplot2 magrittr MASS purrr statmod stringr tweedie]; }; GlobalDeviance = derive2 { name="GlobalDeviance"; version="0.4"; sha256="0s318arq2kmn8fh0rd5hd1h9wmadr9q8yw8ramsjzvdc41bxqq1a"; depends=[snowfall]; }; GlobalFit = derive2 { name="GlobalFit"; version="1.2"; sha256="01s51nxcsl8xxn6khbv5jsvpwblwf0iamvr477a1rraqqqj94zx0"; depends=[sybil]; }; GlobalOptions = derive2 { name="GlobalOptions"; version="0.1.2"; sha256="0gkm77w6db9ajyncy1xdcivplap06a51zi99m009kylccschd2a7"; depends=[]; }; - GmAMisc = derive2 { name="GmAMisc"; version="1.1.1"; sha256="0bvf5p779g8nn0wmna61jyns7wdjl0b0283r8b7m0s325mh6ckfv"; depends=[caTools classInt cluster coin corrplot DescTools dismo ggplot2 ggrepel gridExtra Hmisc InPosition kimisc lsr maptools plyr pROC raster RcmdrMisc rgdal rgeos sp spatstat]; }; - Gmedian = derive2 { name="Gmedian"; version="1.2.5"; sha256="0xx8x4g6wb9djmkx3q1bwwa1vgf10avi6ka3x1jzgsxk6x0jsx0i"; depends=[Rcpp RcppArmadillo robustbase RSpectra]; }; - Gmisc = derive2 { name="Gmisc"; version="1.11.0"; sha256="1fyjyd75mk21y6nfjai1bg3g37sdz27w6vghhcr9zxhlcnwdb6id"; depends=[abind checkmate forestplot glue Hmisc htmlTable knitr lattice lubridate magrittr Rcpp rmarkdown stringr XML yaml]; }; + GmAMisc = derive2 { name="GmAMisc"; version="1.2.0"; sha256="1rdypld7viski65kqh5m6jhmxgxx8mc3dn8kvy710h5wsii3nn04"; depends=[caTools classInt cluster coin corrplot DescTools dismo ggplot2 ggrepel gridExtra Hmisc InPosition kimisc lsr maptools plyr pROC raster RcmdrMisc rgdal rgeos sp spatstat spatstat_core spatstat_geom spatstat_linnet]; }; + Gmedian = derive2 { name="Gmedian"; version="1.2.6"; sha256="1kb60f9r9lq5blv07jjln1j5fq1whjcc54zn7bglpp4hl4f74j5d"; depends=[Rcpp RcppArmadillo robustbase RSpectra]; }; + Gmisc = derive2 { name="Gmisc"; version="2.0.2"; sha256="05pzp1j7s3k52khpmr52ycjc56iwl4jm25dwavv10n2sgfl8mlaq"; depends=[abind checkmate forestplot glue Hmisc htmlTable knitr lattice lubridate magrittr Rcpp rmarkdown stringr XML yaml]; }; GoFKernel = derive2 { name="GoFKernel"; version="2.1-1"; sha256="0xygsdmggl35fafyp431mkwalwixw2r3f32qll1pf72dfwd8y8d3"; depends=[KernSmooth]; }; GofKmt = derive2 { name="GofKmt"; version="2.2.0"; sha256="1v9n1hfracincgaip7pym2l9h54azajw4fmsld0ff2rsd5np362z"; depends=[ggplot2 Rcpp RcppArmadillo Rsolnp]; }; GomoGomonoMi = derive2 { name="GomoGomonoMi"; version="0.1.0"; sha256="16kvf355yzpv0z2rndc5f50pxjnav6ld48j40vyip4h353wpwaks"; depends=[glue htmltools]; }; GoodmanKruskal = derive2 { name="GoodmanKruskal"; version="0.0.3"; sha256="1d0xkmkcfcwx0qs8m4b9dgrbkg1qpb859mmzg4d1rww8rc0wxh9h"; depends=[classInt corrplot]; }; GoogleKnowledgeGraphR = derive2 { name="GoogleKnowledgeGraphR"; version="0.1.0"; sha256="1jxiq1s48skn43pydsw8s67hf70v9fhhw2drcx9vni3c3szs44qd"; depends=[curl jsonlite]; }; - GpGp = derive2 { name="GpGp"; version="0.3.1"; sha256="0wp4b2sh52h99j24vimbah0iip6hhdjim5lfhzwan2vjpg9j3fjd"; depends=[BH FNN Rcpp RcppArmadillo]; }; + GpGp = derive2 { name="GpGp"; version="0.3.2"; sha256="0rypy32j0m3zqxgdlcylf5qjwgz189xyjj28irscaxpzggmf0488"; depends=[BH FNN Rcpp RcppArmadillo]; }; Grace = derive2 { name="Grace"; version="0.5.3"; sha256="0r41zvgdd5rqm15axqqssik6plwy7snpgw8m32labkfn3f0pp7n0"; depends=[glmnet MASS scalreg]; }; GraphPCA = derive2 { name="GraphPCA"; version="1.1"; sha256="0x6j3lyd70zc0c1al1407ma8crzi174d5dqkz6lx4vx24knrlhbs"; depends=[FactoMineR ggplot2 ggplot2movies scatterplot3d]; }; GrapheR = derive2 { name="GrapheR"; version="1.9-86-3"; sha256="0wpq7w4lclkzj9ffmqwk2qp5r6kwggh7by47lvhmai4j8g2ha56c"; depends=[]; }; GrassmannOptim = derive2 { name="GrassmannOptim"; version="2.0"; sha256="05r5zg4kf3xd6pp56bl8ldchdxvspxkdfd33b623hndjhn4lj2lq"; depends=[Matrix]; }; - GreedyEPL = derive2 { name="GreedyEPL"; version="1.0"; sha256="19b8fwxsjd6shwjxhpawa8pmlj6yn0j4577g6b93xbcs76wgrvd1"; depends=[Rcpp RcppArmadillo]; }; GreedyExperimentalDesign = derive2 { name="GreedyExperimentalDesign"; version="1.4"; sha256="0j2grrnd4yn4d1ly62dzqq0y7l7mh3lpnlfpf5n41a9w489m03hw"; depends=[checkmate GreedyExperimentalDesignJARs kernlab nbpMatching Rcpp rJava survey]; }; GreedyExperimentalDesignJARs = derive2 { name="GreedyExperimentalDesignJARs"; version="1.0"; sha256="14i6m5qlh1fca9xmzid01hicd3bkf6rzl139ss78gvw544zrapw7"; depends=[rJava]; }; - GreedySBTM = derive2 { name="GreedySBTM"; version="1.0"; sha256="1r29cd8nxpyc82rz2xb9mk9wc17gcdlcl9lw1j3y4npr2z0qhf13"; depends=[Rcpp RcppArmadillo]; }; Greg = derive2 { name="Greg"; version="1.3.4"; sha256="1s46arnraj9xc98kxj0av64jjg0khxjrvgj1gjqz5f6bw2bxmkm3"; depends=[Epi forestplot Gmisc Hmisc htmlTable knitr magrittr nlme rms sandwich stringr]; }; GridOnClusters = derive2 { name="GridOnClusters"; version="0.0.8"; sha256="16wr7zssiy6y0hvg2s7vhy30qxq5ja8yplv8xncn6iz8giy1wdww"; depends=[cluster dqrng fossil plotrix Rcpp Rdpack]; }; - GriegSmith = derive2 { name="GriegSmith"; version="1.0"; sha256="1a7gnaig1wvxpph7d8c37kx51dznzk0457fzf7alw95iwpyb4z7j"; depends=[spatstat]; }; GrimR = derive2 { name="GrimR"; version="0.5"; sha256="005ywc31yn1cs54kjlkrryw0s7zm8dqqfjkdlkm4s1sbc9r3mssz"; depends=[car]; }; - GroupBN = derive2 { name="GroupBN"; version="0.2.0"; sha256="0aql2ggcyrdpr02bq88xcnpq9jr33iawhwsdi93pzks94hvi8wwz"; depends=[arules bnlearn ClustOfVar magrittr MLmetrics PCAmixdata plyr PRROC rlist stringr visNetwork zoo]; }; + GroupBN = derive2 { name="GroupBN"; version="1.2.0"; sha256="0x41x7npaawnh6nxh4d4vmv2zwzc6c5ijrhh6fdpwzl4p75qlh1x"; depends=[arules bnlearn ClustOfVar magrittr MLmetrics PCAmixdata plyr PRROC rlist stringr visNetwork zoo]; }; GroupComparisons = derive2 { name="GroupComparisons"; version="0.1.0"; sha256="0fxgh1mksrfmd4yjrpxg3nfby5wyx75lj0shb5xrdzl7pxzh56ai"; depends=[car]; }; GroupSeq = derive2 { name="GroupSeq"; version="1.3.5"; sha256="0c74nlsqa5ly0kf6p4n7gfvd0ygkq78bx851ryniwpnnalvsq8l7"; depends=[]; }; GroupTest = derive2 { name="GroupTest"; version="1.0.1"; sha256="1v2230mw0irsr5y8n45g8sd362jp7f6dy2r532mhflfdqy6i2khs"; depends=[]; }; GrpString = derive2 { name="GrpString"; version="0.3.2"; sha256="14ss6assqk6s9kv4bvzlydm8qrbnslm4vj876q5dn2dw4k50dai1"; depends=[cluster plyr Rcpp]; }; GsymPoint = derive2 { name="GsymPoint"; version="1.1.1"; sha256="1fg8vqd86kcpciphmlcxlm0rk01iza7md5y8kcxp9i732n4zn7r8"; depends=[ROCR Rsolnp truncnorm]; }; - GuardianR = derive2 { name="GuardianR"; version="0.9"; sha256="0z0bgm3kr7yqx0yfzhs07k1gs97zpjajfnxn1w1m5w76s7czfzl7"; depends=[RCurl RJSONIO]; }; Guerry = derive2 { name="Guerry"; version="1.7.0"; sha256="0r92xs1ps48yznc146gqmdvz47zvlqfb14yz2ys8bjlk0wna9agv"; depends=[sp]; }; GuessCompx = derive2 { name="GuessCompx"; version="1.0.3"; sha256="1xbkh1wh2z0n964w8lwi7q4rr7mls0awf5k7n5jjklhq4b6gswic"; depends=[boot dplyr ggplot2 lubridate reshape2]; }; GxEScanR = derive2 { name="GxEScanR"; version="2.0.2"; sha256="0k3avad4b2x4sqv8iilx5a8gkybjlipx50mj0la4kl9xv0azshkd"; depends=[prodlim Rcpp RcppArmadillo]; }; GxM = derive2 { name="GxM"; version="1.1"; sha256="02rv8qb46ylk22iqn9cgh63vkyrg9a8nr1d0d3j5hqhi0wyhc41r"; depends=[minqa nlme Rcpp]; }; + H2x2Factorial = derive2 { name="H2x2Factorial"; version="1.1.0"; sha256="1gwqps3c0bg8bp1za3axgymxa6zc4v3pyvcqs8zhj1s61xx3nvvw"; depends=[]; }; HAC = derive2 { name="HAC"; version="1.0-8"; sha256="04pp3xanw8bm5i3fpxg2j6h4qrff81087jmid5grgzs1pgd59p1c"; depends=[copula numDeriv]; }; HACSim = derive2 { name="HACSim"; version="1.0.5"; sha256="0161h3yhi3bh0jq7x105p3rjlrvl46k4iahfz4k84wsvw3akgk1a"; depends=[ape pegas Rcpp RcppArmadillo]; }; HAPim = derive2 { name="HAPim"; version="1.3"; sha256="03qy0pxazv3gdq3fck7171ixilb9zi1dwnvc4v7d726g0lvn80pg"; depends=[]; }; HARModel = derive2 { name="HARModel"; version="1.0"; sha256="17sajqi2g5z69gvnfhkn850jkavi8syhm58xadd2khrm73nvwh2i"; depends=[Rcpp RcppArmadillo sandwich xts zoo]; }; HARtools = derive2 { name="HARtools"; version="0.0.5"; sha256="10a92jsk1ccgxi5g6byrs4fbj5l2kih7vhib0jg6spdqi6rhqla1"; depends=[assertthat htmltools htmlwidgets jsonlite magrittr]; }; HBSTM = derive2 { name="HBSTM"; version="1.0.1"; sha256="0bx7dxcfj46k4kqpqb39w4qkm4hvr1ka8d8rws445vkyl31kr0q6"; depends=[fBasics maps MASS]; }; - HBV_IANIGLA = derive2 { name="HBV.IANIGLA"; version="0.1.1"; sha256="186q915ac2zr2mm43yf7wxj0nw6pz5v7l80p8n15f8m5z6s87l8s"; depends=[Rcpp]; }; + HBV_IANIGLA = derive2 { name="HBV.IANIGLA"; version="0.2.1"; sha256="08876xg44md619m8cj1xb34g8xyrp8231nh5z0q6dzggdyfvicir"; depends=[Rcpp]; }; HBglm = derive2 { name="HBglm"; version="0.1"; sha256="1sral7lh5qw5mn31n8459pk52frgw1bjq0z5ckpsnbc4qf3xxcjn"; depends=[bayesm Formula MfUSampler sns]; }; HCD = derive2 { name="HCD"; version="0.1"; sha256="158szwhpxwj2dj7sibyh8l92dk9cmy6acapmk8wf5hmfybdpgbsh"; depends=[data_table data_tree dendextend irlba Matrix randnet RSpectra stringr]; }; HCR = derive2 { name="HCR"; version="0.1.1"; sha256="14s46dyw3ifp3pwwlcwbbl47i6hy2whjj1n65i28am5a33nycgha"; depends=[data_table]; }; - HCT = derive2 { name="HCT"; version="0.1.0"; sha256="0p1bj0spqff8m27lvxdfhk8z1r1z04v1dsv7mqbjyzl07w005hk3"; depends=[rstan]; }; HCTR = derive2 { name="HCTR"; version="0.1.1"; sha256="1hg8mpallwxpmamk6q8x87w5hlqqwvbahfw5zmr9pisiagbwcsay"; depends=[glmnet harmonicmeanp MASS ncvreg Rdpack]; }; - HCmodelSets = derive2 { name="HCmodelSets"; version="1.1.1"; sha256="1fk4q6422lzyf4cwirqz1d70av21m6pwmsy2rqjcraclr4mddw7s"; depends=[ggplot2 mvtnorm survival]; }; + HDBRR = derive2 { name="HDBRR"; version="0.1.8"; sha256="06751z1i3dkaim9rybkvaqa0yaracrfvcjcshnh3q8ap2jl9j8iy"; depends=[bigstatsr MASS numDeriv]; }; HDCI = derive2 { name="HDCI"; version="1.0-2"; sha256="0wxbv54kbygymhh4r7052vnbj603c1kya01ykvmqzzkjyyfzidkz"; depends=[doParallel foreach glmnet iterators lattice Matrix mvtnorm slam]; }; HDCurves = derive2 { name="HDCurves"; version="0.1.0"; sha256="1ifcbwcqgdxicqxcqrsl9kp3zadxhijpwff8ln309378vybr3gh1"; depends=[]; }; HDDesign = derive2 { name="HDDesign"; version="1.1"; sha256="1jim4h9bwn8r637va7m81kwwsfwyzs9pzn5a9i7c8xz8b1x191bj"; depends=[]; }; HDGLM = derive2 { name="HDGLM"; version="0.1"; sha256="0a5lnh3780lsczj8339sp97c5y64a2gsdf77i56fvpxpphq0dnf8"; depends=[]; }; HDInterval = derive2 { name="HDInterval"; version="0.2.2"; sha256="1vb5fn9zfig0jqs3mvkpik4wvrndj4qmxqx8rg0iv8nvqc4fnzh4"; depends=[]; }; - HDLSSkST = derive2 { name="HDLSSkST"; version="1.0.1"; sha256="1rslx3zxqh0byi6g4a446v3pagn174ibn115wd3dncpm8gka6q7s"; depends=[Rcpp]; }; + HDLSSkST = derive2 { name="HDLSSkST"; version="2.0.0"; sha256="17s3xa33c7671fraw56jsc2wqnkxzl0sjjhgkiryma3q0f01dczf"; depends=[Rcpp]; }; HDMD = derive2 { name="HDMD"; version="1.2"; sha256="0na0z08fdf47ghfl2r3fp9qg5pi99kvp7liymwxym2wglkwl4chq"; depends=[MASS psych]; }; - HDMT = derive2 { name="HDMT"; version="1.0.2"; sha256="1nab737pmafsbpda4n7rzf79bpjvaklwhfd93s65x7daz90c1whi"; depends=[fdrtool]; }; + HDMT = derive2 { name="HDMT"; version="1.0.3"; sha256="15p8n1schk5i708k3h7ly5a8rxhm6jivjdlqkica5mzghl2bqa37"; depends=[fdrtool]; }; HDPenReg = derive2 { name="HDPenReg"; version="0.94.7"; sha256="16kmx3lddjvz8k7sric0s9ajhlgp62gf1zkyiscaf7w0pjwzin28"; depends=[Matrix Rcpp rtkore]; }; HDclassif = derive2 { name="HDclassif"; version="2.2.0"; sha256="1l5zxhayhzh7q50ycl481hy0br66ylxyvzw1ahmjjrdkm8s3czyj"; depends=[MASS rARPACK]; }; HDclust = derive2 { name="HDclust"; version="1.0.3"; sha256="18l4qp261gj3kscfxs3s03kmb9y5ml31vnpgpm1iy125bks4mr2y"; depends=[Rcpp RcppProgress Rtsne]; }; HDcpDetect = derive2 { name="HDcpDetect"; version="0.1.0"; sha256="0ai35d9df5pmva52sb1rr20f11h0mbal6d179g865b7w6n90kfr1"; depends=[]; }; - HDiR = derive2 { name="HDiR"; version="1.0"; sha256="0aqllrkljj02rr25rr2hci00wgicghqwqc6ivfv2ll67kyfpvviq"; depends=[circular Directional movMF NPCirc rgl]; }; + HDiR = derive2 { name="HDiR"; version="1.1.1"; sha256="1j9y1sc642ghz0rfdsrsg46c56mgdg9444a4b5zv2ami9b4zs2an"; depends=[circular Directional movMF NPCirc rgl]; }; HDoutliers = derive2 { name="HDoutliers"; version="1.0.3"; sha256="167g72b23jpjfhnz2faxia2lma328gvqkrlnz6xizzq7vb7cmb18"; depends=[FactoMineR FNN mclust]; }; HDtest = derive2 { name="HDtest"; version="2.1"; sha256="1c9x4s59762sp7drbm5h1xv22kpifq7p0x3dkrfcd0ficbbma5v8"; depends=[checkmate clime doParallel expm fastclime foreach MASS mvtnorm]; }; HDtweedie = derive2 { name="HDtweedie"; version="1.1"; sha256="14awd7sws0464f68f5xwnv1xvr0xflvx2z2zzcfj1csvk3af0zzj"; depends=[]; }; - HEMDAG = derive2 { name="HEMDAG"; version="2.7.3"; sha256="13sclhqcl8zl54j5sdli3jnc7vw2f26sn2b0cs3hdbrsa4s2kssc"; depends=[doParallel foreach graph plyr precrec preprocessCore RBGL]; }; + HEMDAG = derive2 { name="HEMDAG"; version="2.7.4"; sha256="1dmfy5bbnjmjb4d7430i38z9hvpcrwafj6hw46118hwzcl4b6ldv"; depends=[doParallel foreach graph plyr precrec preprocessCore RBGL]; }; HETOP = derive2 { name="HETOP"; version="0.2-6"; sha256="1fjwyqh7l296pghmc4m81q8icgbhvqvxr61zd638fr46gls3ky2p"; depends=[R2jags]; }; + HGMND = derive2 { name="HGMND"; version="0.1.0"; sha256="1iwqssj66q9dfgddzwqmnnpvxnvlrq7p1axm95lpkf3vrpn5rp6b"; depends=[genscore]; }; HGNChelper = derive2 { name="HGNChelper"; version="0.8.1"; sha256="0qwkk5658j4j6w2wgvxkp38cyvscjp93d3zc7gb97vcihqx0ngxa"; depends=[]; }; HGSL = derive2 { name="HGSL"; version="1.0.0"; sha256="1p453xr3d1bmqc6mrmzb0hz9p0gp25m6v6qr0l3bapcf71vzbvq1"; depends=[]; }; HH = derive2 { name="HH"; version="3.1-43"; sha256="0nr3sa6di06cjmljdxfq7bcpnp9d6kna4f9lrv9fk4khr67mrlrf"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; }; @@ -1912,7 +1962,7 @@ in with self; { HIest = derive2 { name="HIest"; version="2.0"; sha256="0ik55kxhzjyg6z6072iz9nfaj7x1nvf91l1kysgvkjccr6jf3y86"; depends=[nnet]; }; HK80 = derive2 { name="HK80"; version="0.0.2"; sha256="0c8scpzl5xgqm9rlsvh5nl3bz42i5pzvb873j9bn3bi15gcknbny"; depends=[]; }; HKprocess = derive2 { name="HKprocess"; version="0.0-2"; sha256="1j2yhb7k8zf4nlzdf0p6x9ca7ak4lwwak8mcc60kpilw2fws27k5"; depends=[gtools MCMCpack]; }; - HLMdiag = derive2 { name="HLMdiag"; version="0.4.0"; sha256="0nmqbz3wva2xsn3v1ir5nayfg3wnr6pz8zp7xmyrgdvvs7hsfqhp"; depends=[dplyr ggplot2 ggrepel janitor magrittr MASS Matrix mgcv plyr purrr Rcpp RcppArmadillo reshape2 rlang stringr tibble tidyselect]; }; + HLMdiag = derive2 { name="HLMdiag"; version="0.5.0"; sha256="0yy0qf9iw5gr40vlmm697rvvvgp077f08fialx3ijn0vfpsjbl2v"; depends=[diagonals dplyr ggplot2 ggrepel janitor magrittr MASS Matrix mgcv plyr purrr Rcpp RcppArmadillo reshape2 rlang stringr tibble tidyselect]; }; HLSM = derive2 { name="HLSM"; version="0.8.2"; sha256="1jqfk5mlx603s3v069dab7wm0wy8qil50rw1s5x6f21xrahaqks2"; depends=[abind coda igraph MASS]; }; HMB = derive2 { name="HMB"; version="1.1"; sha256="19z3d0b98fyjcnbxh3g6h2g927nv0408sbxjlzalrjlw9mbpzd2b"; depends=[Rcpp RcppArmadillo]; }; HMDHFDplus = derive2 { name="HMDHFDplus"; version="1.9.13"; sha256="1n507nsqz1blikci56jhp48rdpq38dnadh8warc2jmvwizl22a3b"; depends=[httr RCurl XML]; }; @@ -1931,15 +1981,14 @@ in with self; { HPbayes = derive2 { name="HPbayes"; version="0.1"; sha256="1kpqnv7ymf95sgb0ik7npc4qfkzc1zb483vwnjpba4f42jhf508y"; depends=[boot corpcor MASS mvtnorm numDeriv]; }; HRM = derive2 { name="HRM"; version="1.2.1"; sha256="0qsxwi0v61k1waw21nrz86jazd5wgq2drhan3w8pmb35q2z20s35"; depends=[data_table doBy ggplot2 MASS matrixcalc mvtnorm plyr pseudorank Rcpp reshape2 xtable]; }; HRM_curve = derive2 { name="HRM.curve"; version="0.0.1"; sha256="0p3kvldpz347c0cdjkrdm0x2nfj85hm5cp59lirqhq77hf1zfnd5"; depends=[]; }; - HRW = derive2 { name="HRW"; version="1.0-3"; sha256="12y43sl30949jc9ab10ipx8k4rvb9g8gwaazi8j3k1grh26ivpii"; depends=[KernSmooth]; }; + HRW = derive2 { name="HRW"; version="1.0-4"; sha256="0bjx8rg132m782cqy744ylbigvbj48ywcgws1jwmh0ry60hyqxav"; depends=[KernSmooth]; }; HS = derive2 { name="HS"; version="1.1"; sha256="1vhbchc446j49jj7jgmy4l59n8ahk5l8jp1rl5xwsmn9iqir62mp"; depends=[data_table ggplot2 ggpubr partitions reshape2 tidyr zoo]; }; HSAR = derive2 { name="HSAR"; version="0.5.1"; sha256="03ryscvgiiwjcqk6gy3251nqqk43x508kz3ibw35hi84m2s7fsxj"; depends=[Rcpp RcppArmadillo spatialreg spdep]; }; HSAUR = derive2 { name="HSAUR"; version="1.3-9"; sha256="0b2hyn59lr2pma87fcj7mli3qmrbnfhgd8fv02fa317rj52399qz"; depends=[]; }; HSAUR2 = derive2 { name="HSAUR2"; version="1.1-18"; sha256="0ggya24clwydi7aligdayds3jpq2ckr4xfm4nik0r6j97x4gl1mj"; depends=[]; }; - HSAUR3 = derive2 { name="HSAUR3"; version="1.0-10"; sha256="1wi0ficlhh3h60chyrvjb0g3z75avh4bq717nm4zh0b0j838qavg"; depends=[]; }; + HSAUR3 = derive2 { name="HSAUR3"; version="1.0-11"; sha256="1p5v655dkvq2wg10s7nrwrgh755zyivayy4x1szc22z77861lj2l"; depends=[]; }; HSDiC = derive2 { name="HSDiC"; version="0.1"; sha256="0wiixb1ylx0l8qfgh5ark6alkdq87xaak1jlxizw1m589vghvqfp"; depends=[glmnet Matrix ncvreg quadprog]; }; HSPOR = derive2 { name="HSPOR"; version="1.1.9"; sha256="06lr8l71y5fcqcnmgq7cgiab1pcc98wnqzndbxcbikbh33cx7nxv"; depends=[corpcor npregfast]; }; - HSSVD = derive2 { name="HSSVD"; version="1.2"; sha256="1k7ga397grl0r4p0ipjgw5xlafb2528rpww67bw7mmy01w87a1cc"; depends=[bcv]; }; HTLR = derive2 { name="HTLR"; version="0.4-3"; sha256="1bxgfiwbnvpdw0d6k34c1wc47z6pvx0imnz36c6r99zls5bm129y"; depends=[BCBCSF glmnet magrittr Rcpp RcppArmadillo]; }; HTMLUtils = derive2 { name="HTMLUtils"; version="0.1.7"; sha256="05y505jazzahnd6jsp3plqz8hd75991hhhcpcdn8093rinb1f8l1"; depends=[R2HTML]; }; HTSCluster = derive2 { name="HTSCluster"; version="2.0.8"; sha256="0wnbfh6hdx8692jilgmv8sys1zm6fqc6mim7vvjhyqlmpm8gm0kg"; depends=[capushe edgeR plotrix]; }; @@ -1957,33 +2006,34 @@ in with self; { Hapi = derive2 { name="Hapi"; version="0.0.3"; sha256="0jqjhfq38k161kqff5cx0vxpsmjm2y5ca7049mvqiwqwvi4fp08m"; depends=[ggplot2 HMM]; }; Haplin = derive2 { name="Haplin"; version="7.2.3"; sha256="1s1jlyr0gwvigfndqjbxb8zib6hkmn341khsnv87f82vzakmhi80"; depends=[ff MASS mgcv rlang]; }; HaploSim = derive2 { name="HaploSim"; version="1.8.4"; sha256="0794f76hc9qvjmay7c61cmzycqafljs0g0hliq9xfrw4f23gq3sa"; depends=[]; }; - HardyWeinberg = derive2 { name="HardyWeinberg"; version="1.7.0"; sha256="0fadvv0xv5c2znnmcyaa8dmlijiyv9602wcls600wjlr4l88f67r"; depends=[mice Rcpp Rsolnp]; }; + HardyWeinberg = derive2 { name="HardyWeinberg"; version="1.7.2"; sha256="0g10jh71yp0pcag44z409xqb6d941l7y887a632962bk5rgn6q5p"; depends=[mice Rcpp Rsolnp]; }; HarmonicRegression = derive2 { name="HarmonicRegression"; version="1.0"; sha256="0inz3l610wl0ibqjyrhfbmwmcfzcmcfhixai4lpkbfsyx93z2i4d"; depends=[]; }; Harvest_Tree = derive2 { name="Harvest.Tree"; version="1.1"; sha256="021zmppy7p2iakaxirfjdb5jzakg1ijma9d25ly2ni0nx0p1mh6z"; depends=[rpart]; }; HeckmanEM = derive2 { name="HeckmanEM"; version="0.1.1"; sha256="1v0359c2v514k139kgjjww3f0z4xgr5s4l0649xxm9hdq7qs6667"; depends=[MomTrunc mvtnorm PerformanceAnalytics sampleSelection]; }; HellCor = derive2 { name="HellCor"; version="1.3"; sha256="1bzc2ipm7vw7s849d43lcs0xrk2rs67h223dn9kahqg152mmknza"; depends=[energy FNN orthopolynom]; }; - HelpersMG = derive2 { name="HelpersMG"; version="4.3"; sha256="0kgsvzwya6r1zhzy0mwjdm41hpxssyd2qn16bcmpxkdd3njbk4bs"; depends=[coda lme4]; }; + HelpersMG = derive2 { name="HelpersMG"; version="4.5"; sha256="1c4m5kl0ppmwm561vzj734rypfxcnmx6i3ii32qmzhnp592n3g0z"; depends=[coda lme4 MASS]; }; HeritSeq = derive2 { name="HeritSeq"; version="1.0.1"; sha256="0l1saxwj99xwkzcy43v0k9sicqwpw9gc8ywxpablagcddfj05pi3"; depends=[cplm DESeq2 lme4 MASS pbapply SummarizedExperiment tweedie]; }; HeterFunctionalData = derive2 { name="HeterFunctionalData"; version="0.1.0"; sha256="0qrfmxwrxn0rd2ncy3afhraf7m0010nf9739jkj19h1j5vksi9n1"; depends=[]; }; + HeteroGGM = derive2 { name="HeteroGGM"; version="0.1.0"; sha256="0cfzqhbnsy2254m1n6vbpcxlmiqw7cs26v81f5wyawlyyvdydmxi"; depends=[igraph MASS Matrix]; }; HextractoR = derive2 { name="HextractoR"; version="1.4"; sha256="1wp7n92wgrjyklq159ymrw8y5ads6lhj2fcz54rzdnccdyx5naxi"; depends=[doParallel foreach seqinr]; }; HiCfeat = derive2 { name="HiCfeat"; version="1.4"; sha256="1imz7zfax74aakzk8457jww9r66qxpr2ncyvjj0y5paxdn76lnnq"; depends=[GenomeInfoDb GenomicRanges glmnet IRanges Matrix rtracklayer]; }; - HiClimR = derive2 { name="HiClimR"; version="2.1.7"; sha256="0gzpxwzrr4kh2kd1yy3dlf0d4qricah7l6q1mwz6g79c54z86dz7"; depends=[ncdf4]; }; + HiClimR = derive2 { name="HiClimR"; version="2.1.9"; sha256="003lyq9pr5adpx9p11w3dsw7aryza25xbzqh04jw67gcpaff2ng0"; depends=[ncdf4]; }; HiCseg = derive2 { name="HiCseg"; version="1.1"; sha256="19581k3g71wrznyqrp4hmspqyzcbcfbc48xgjlq13zmqii45hcn6"; depends=[]; }; HiDimDA = derive2 { name="HiDimDA"; version="0.2-4"; sha256="0gxkxzys9mcy33xvsim8klaqmb2xwvy5bvgkn9r400j4qfjd3cgg"; depends=[]; }; HiLMM = derive2 { name="HiLMM"; version="1.1"; sha256="09135cwi6kqrvzdlivm86q1dqn6cbbi6nspdm0c2s700jl49pl5z"; depends=[]; }; HiResTEC = derive2 { name="HiResTEC"; version="0.59"; sha256="08c5zvj1as28skhlyybrjinc9wawdsqfxiwybd0ni0ljh2i2sc5c"; depends=[beeswarm Biobase InterpretMSSpectrum openxlsx plyr Rdisop]; }; - HiddenMarkov = derive2 { name="HiddenMarkov"; version="1.8-11"; sha256="1yh85pdb9r90qxcl5gxslyplxzrx8knrrsl2q65l57zfkqj185ja"; depends=[]; }; - HierDpart = derive2 { name="HierDpart"; version="0.5.0"; sha256="1lrp5snkx5irrx6b19wdfmkpbxdy4gxkhpjibfin109s5r54jvvg"; depends=[ade4 adegenet ape diveRsity entropart GGally ggplot2 hierfstat mmod pegas permute reshape2 tibble vegan]; }; + HiddenMarkov = derive2 { name="HiddenMarkov"; version="1.8-13"; sha256="05dm3nl0ffsz2ziw3bz5bivyxk7r5bxs8xhky3hz660qaqzd51ki"; depends=[]; }; + HierDpart = derive2 { name="HierDpart"; version="1.5.0"; sha256="10sphan6slzj6bsbzff4z7pglkjhv6xy719dm7594fmgqfjz0ici"; depends=[ade4 adegenet ape diveRsity entropart GGally ggplot2 hierfstat mmod pegas permute reshape2 tibble vegan]; }; HierO = derive2 { name="HierO"; version="0.2"; sha256="1lqj5grjly4kzxl7wb192aagz2kdvpnjdan2kcg5yxwvg1xcvwv1"; depends=[bitops RCurl rneos tcltk2 XML]; }; - HighDimOut = derive2 { name="HighDimOut"; version="1.0.0"; sha256="0r7mazwq4fsz547d3nyavmqya7144lg3fkl5f7amrp48l9h85vx2"; depends=[DMwR FNN foreach ggplot2 plyr proxy]; }; HighestMedianRules = derive2 { name="HighestMedianRules"; version="1.0"; sha256="01fj3xgrb9iav5v91bq04hzv9nhnwy8l00dx6yykghwvzjwfv3ih"; depends=[RMallow]; }; HistDAWass = derive2 { name="HistDAWass"; version="1.0.4"; sha256="18l9hjkdcwk1lh19z240s9rqg49v9gpydllcaa5jndysylx8ybjr"; depends=[class FactoMineR ggplot2 ggridges histogram Rcpp RcppArmadillo]; }; - HistData = derive2 { name="HistData"; version="0.8-6"; sha256="0an8cki2ahaf3ynbcqgikxi90l3bv7gcn6nnwnli9g1br89y3bd4"; depends=[]; }; + HistDat = derive2 { name="HistDat"; version="0.2.0"; sha256="06zxsja8qk48q9lrr9fbk4sbpidysp31mcirxfr12l348lc9zf10"; depends=[]; }; + HistData = derive2 { name="HistData"; version="0.8-7"; sha256="0cs231w4x8sw2dwy04xwiw01rr2brfz9smwmplw5g1jv1d7afnlj"; depends=[]; }; HistogramTools = derive2 { name="HistogramTools"; version="0.3.2"; sha256="1wkv6ypn006d8j6bpbhc1knw0bky4y8r7jp87482yd19q5ljsgv0"; depends=[ash Hmisc stringr]; }; HiveR = derive2 { name="HiveR"; version="0.3.63"; sha256="1vi24k23a017czfy9kihmq4s1dywzm274dyhyp1imx94afsnmhc3"; depends=[jpeg plyr png RColorBrewer rgl]; }; - Hmisc = derive2 { name="Hmisc"; version="4.4-2"; sha256="1j7vkckmahdh90ndcl646sjpxq82y4x55ngxqvkni22mv16wc2j9"; depends=[base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; }; - Hmsc = derive2 { name="Hmsc"; version="3.0-9"; sha256="1xy6xbnfpr7nnrgq9v3gzrfjchnng74p5f9nfxg584n6zyqk4lj0"; depends=[abind ape BayesLogit coda fields FNN ggplot2 MASS Matrix MCMCpack nnet pROC rlang sp statmod truncnorm]; }; - HoRM = derive2 { name="HoRM"; version="0.1.2"; sha256="0vfsya6423i25szdj5s8pa8pwshiqykikxdbbj7r2nz73x3qp6hy"; depends=[ggplot2 MASS orthopolynom quantmod rsm]; }; + Hmisc = derive2 { name="Hmisc"; version="4.5-0"; sha256="11qj73zj16p113jpwn2vv06l99kqlcxcmrldbpyi5s7pwing9jnx"; depends=[base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; }; + Hmsc = derive2 { name="Hmsc"; version="3.0-11"; sha256="12h9k73bys6ihgs4wgssn9jlgig0kim8i49nqgd3jnd1i3m9b3ii"; depends=[abind ape BayesLogit coda fields FNN ggplot2 MASS Matrix matrixStats MCMCpack nnet pracma pROC rlang sp statmod truncnorm]; }; + HoRM = derive2 { name="HoRM"; version="0.1.3"; sha256="09dkpzlwkkdn0z8g9fbb7hzxbrrq70x9v1zx254svck2jyk0hx58"; depends=[ggplot2 MASS orthopolynom quantmod rsm]; }; Holidays = derive2 { name="Holidays"; version="1.0-7"; sha256="1srfbhlrf0pd6gzhp4hbic555lb7camk084rn1qz2g7fjvyijqiq"; depends=[TimeWarp]; }; Homeric = derive2 { name="Homeric"; version="0.1-3"; sha256="1vcs8fj39zpz45p7gph0mnx65hgr35na0b79i8llyw7i1h7zqzxr"; depends=[]; }; Hotelling = derive2 { name="Hotelling"; version="1.0-5"; sha256="1ism2lzi2kmi62gp319qsi64pj2kj5sfh50f1qnv8vgdkb76bdx5"; depends=[corpcor]; }; @@ -1992,6 +2042,8 @@ in with self; { HybridMC = derive2 { name="HybridMC"; version="0.2"; sha256="1wgzfyk0scwq9s2sdmc91fj7r4d7zlgwgnj6mdiia8w88ja8kzqy"; depends=[coda]; }; HydeNet = derive2 { name="HydeNet"; version="0.10.11"; sha256="1qi87k2drizqba1nz8psh697ks8ai8xz492kzsrs76xlxpbk1i9k"; depends=[checkmate DiagrammeR dplyr graph magrittr nnet pixiedust plyr rjags stringr]; }; HydroCode = derive2 { name="HydroCode"; version="1.0.2"; sha256="1igshik28xcxrdg116vs9s2yfbz5fik9xvlgfkgai3w9qj0x1h5q"; depends=[sp]; }; + HydroMe = derive2 { name="HydroMe"; version="2.0-1"; sha256="1pzf3z3f2xqmj7ixdg01k8552l4vz7yaf2mb53q59ihfhlbqchni"; depends=[]; }; + HyperG = derive2 { name="HyperG"; version="1.0.0"; sha256="0w84ph0vd03i22s8g52jf2w96yd80ynbh6x0p88apg92jdsapcrc"; depends=[gtools igraph Matrix mclust proxy RSpectra]; }; HyperbolicDist = derive2 { name="HyperbolicDist"; version="0.6-2"; sha256="1wgqbx9ascyk6gw1dmvfz6hljvbh49gb9shr9qgf22qbq83waiva"; depends=[]; }; HypergeoMat = derive2 { name="HypergeoMat"; version="3.1.0"; sha256="1pnwj0mqzangjvxnp5yq1ll4qhkpkvv427nzq3sqwpn9qd8gisvf"; depends=[gsl Rcpp RcppArmadillo]; }; IASD = derive2 { name="IASD"; version="1.1"; sha256="1slhd42k639mbyxccl7n69p7ng2qx6pqag8wz3kdwn479spkavzn"; depends=[]; }; @@ -2009,13 +2061,14 @@ in with self; { IBrokers = derive2 { name="IBrokers"; version="0.9-12"; sha256="0mhh4kgwrncrcysvnvah6xc7fhx5ywjzn258cs9xj9kzns0jblk6"; depends=[xts zoo]; }; IC2 = derive2 { name="IC2"; version="1.0-1"; sha256="03jjb62msxjxdg9l3zd1ns0d2w37hkxy5pnjgaywxw3vfk4zwfj9"; depends=[]; }; ICAFF = derive2 { name="ICAFF"; version="1.0.1"; sha256="0zazx4nv81s75appg10aayks04mx6m5n9yf5hqrbxh3yj68vzxfy"; depends=[]; }; - ICAMS = derive2 { name="ICAMS"; version="2.2.4"; sha256="1qlyj6fqz27gbyjhncmjj0wms8jl562l1yyf30mb0ia2wbc54895"; depends=[Biostrings BSgenome data_table dplyr GenomeInfoDb GenomicRanges IRanges RColorBrewer stringi zip]; }; + ICAMS = derive2 { name="ICAMS"; version="2.3.10"; sha256="0kkxn45addgl7mg8w4ybna7xaj11dgrwax06l0ml3bnk8h0nrgi5"; depends=[Biostrings BSgenome data_table dplyr GenomeInfoDb GenomicRanges IRanges RColorBrewer stringi zip]; }; ICAOD = derive2 { name="ICAOD"; version="1.0.1"; sha256="07fxh60vsndlvjijjsh1a9l2qkp78sb9nkg5x5mslh209lpjjhw1"; depends=[cubature mnormt mvQuad nloptr Rcpp RcppEigen sn]; }; ICBayes = derive2 { name="ICBayes"; version="1.2"; sha256="1hdh7g4nk6yy0xz9564vpvh1blrw30lvyw2wc5mmgn78kwjqla34"; depends=[coda HI survival]; }; + ICBioMark = derive2 { name="ICBioMark"; version="0.1.2"; sha256="01bmh2kx1w3h7aqvm6nkmbdv576r3la3f2973jzak4j662yyk9sj"; depends=[dplyr gglasso ggplot2 glmnet latex2exp Matrix matrixStats PRROC purrr]; }; ICC = derive2 { name="ICC"; version="2.3.0"; sha256="0y8zh9715cp9bglxpygqwgigrarq37sj845lk1xl0ydwinl0a6kk"; depends=[]; }; ICC_Sample_Size = derive2 { name="ICC.Sample.Size"; version="1.0"; sha256="1w6v1jp8bfvf6c49ikswkc5527gdx5cyqnw95x00pgmm6riwlsp9"; depends=[]; }; ICCbin = derive2 { name="ICCbin"; version="1.1.1"; sha256="1pzlaj7w98pgrlg3zvpmdv0dpgi5gih0j73qv86ak75fkxvrnzzw"; depends=[]; }; - ICD10gm = derive2 { name="ICD10gm"; version="1.1"; sha256="0m0j88c8mkc0v22dw25l76gch883n21ifw9dpc189mq887856jp8"; depends=[dplyr magrittr purrr rlang stringi tibble tidyr tidyselect]; }; + ICD10gm = derive2 { name="ICD10gm"; version="1.2.2"; sha256="1ljhlnb2zqmdddyv2wqmkj29k05xb5laf9vk9d5vqbmlpwl2hqqg"; depends=[dplyr magrittr purrr rlang stringi tibble tidyr tidyselect]; }; ICDS = derive2 { name="ICDS"; version="0.1.1"; sha256="1jb98xi37jcf6nl5lx2ip9614l4w7lz7v53jpcbdj0ymqbfx1s70"; depends=[graphite igraph metap org_Hs_eg_db]; }; ICE = derive2 { name="ICE"; version="0.69"; sha256="04p8lakaha28mdh965w0ppyxfrz5ssi1n9xifvsbn3ihdra67rip"; depends=[KernSmooth]; }; ICEbox = derive2 { name="ICEbox"; version="1.1.2"; sha256="170gg2fg9307yc2b25lsj8d1zla0frjxl47qh0njlqlrpi8jmm7i"; depends=[sfsmisc]; }; @@ -2026,39 +2079,40 @@ in with self; { ICON = derive2 { name="ICON"; version="0.4.0"; sha256="02ilj6mwgzam5pgd3iadpwpyvigbq2y113lh099yrmcq325jb8z5"; depends=[network]; }; ICRanks = derive2 { name="ICRanks"; version="3.1"; sha256="1vwzqkjg7i5hm96s8frp72n6xqadlsawzr1wby1fhsxl2m5f1797"; depends=[gmp multcomp Rcpp]; }; ICS = derive2 { name="ICS"; version="1.3-1"; sha256="0x3cwhvzcibgyb8gqy6dc6lgnvbf6x8425zai57g8yn5i6zzc1li"; depends=[mvtnorm survey]; }; + ICSKAT = derive2 { name="ICSKAT"; version="0.1.0"; sha256="148sw8yg1ww39sdn5r77gx70nz40igz2rw9fwfj2nyq92j1l020k"; depends=[CompQuadForm dplyr magrittr Rcpp RcppEigen rje survival tidyr zoo]; }; ICSNP = derive2 { name="ICSNP"; version="1.1-1"; sha256="1zf0k1kwdmjjqsbiiy3r2l47vjsrg09fj65p6zfld3j4gjbp17fd"; depends=[ICS mvtnorm]; }; ICSOutlier = derive2 { name="ICSOutlier"; version="0.3-0"; sha256="1vj1y4zw8pkghkg4qnmx0yk1yw4zzl9075n5czrna9ckk2p29fmh"; depends=[ICS moments mvtnorm]; }; - ICSS = derive2 { name="ICSS"; version="1.0"; sha256="1cwpz5bdksq086y195mmvpjmbaama0nwqjfqnls5xq7mwq15nb4s"; depends=[rstack]; }; + ICSS = derive2 { name="ICSS"; version="1.1"; sha256="0kmsw8347ka5n0qncx7hqgs153ihkmxbl0wc5kqlb2l42sl6rp8x"; depends=[rstack]; }; ICSShiny = derive2 { name="ICSShiny"; version="0.5"; sha256="0a13vps0mkv5qs6qnl7ar0mdbkbd7i1c6kgwahmkb3id3n9bw0cl"; depends=[DT ICS ICSNP ICSOutlier rrcov shiny simsalapar]; }; + ICSsmoothing = derive2 { name="ICSsmoothing"; version="1.2.5"; sha256="08m8p6y5zk54ha3wp5x9xbx6f2xkkqx232hsan1f1s8k9j3q5avd"; depends=[ggplot2 polynom]; }; ICV = derive2 { name="ICV"; version="1.0"; sha256="1na87i39jy5d8ibldqcqz3a072ihkgcl0k629sxch9hk6v6j5lly"; depends=[]; }; ICcalib = derive2 { name="ICcalib"; version="1.0.8"; sha256="1y2w12ka0qxh9dg6dlcrnndz1xrv8gkppan64qkyk5vjrh18ajz4"; depends=[fitdistrplus icenReg ICsurv MASS msm numDeriv Rcpp RcppArmadillo survival]; }; ICcforest = derive2 { name="ICcforest"; version="0.5.1"; sha256="0z511d3drq5flxwvx7kjv3v5yanjhvs5ayvkm996jbiz3k49a12v"; depends=[icenReg ipred partykit survival]; }; ICsurv = derive2 { name="ICsurv"; version="1.0"; sha256="1mbndpy3x5731c9y955wscy76jrxlgv33bf6ldqp65cwyvdgxl86"; depends=[MASS matrixcalc]; }; - ICtest = derive2 { name="ICtest"; version="0.3-2"; sha256="00h72rngcyjhin9g8x80mypm8zx765nm5jgsyjya9m4kw8x4h8la"; depends=[GGally ggplot2 ICS ICSNP JADE png Rcpp RcppArmadillo survey xts zoo]; }; + ICtest = derive2 { name="ICtest"; version="0.3-4"; sha256="130n25xxq0iav5y2anyhjjkpvfs438qxjgrbil7yzpaaifhxrmi2"; depends=[GGally ggplot2 ICS ICSNP JADE png Rcpp RcppArmadillo survey xts zoo]; }; IDCard = derive2 { name="IDCard"; version="0.3.0"; sha256="06b5zqmgh4clni3mv6ab2a52r4z34isbz0hd1i61793gps9fkc0y"; depends=[stringr]; }; IDE = derive2 { name="IDE"; version="0.3.0"; sha256="1m1y7gd8i14kl54qxhjy7bnf2md5vs7bb73k7k92nizv941qn0mn"; depends=[DEoptim dplyr FRK ggplot2 Matrix sp spacetime sparseinv tidyr]; }; + IDF = derive2 { name="IDF"; version="2.1.0"; sha256="01hfnjiq0a9xmg605kyvvx44pm1fm1h1li6gkp0yw3ryz15r654n"; depends=[evd fastmatch ismev pbapply RcppRoll]; }; IDPSurvival = derive2 { name="IDPSurvival"; version="1.2"; sha256="0hifs8vw3rxlb5vlxs1433pcv2dh7p0mxpgb2n03d98f20vkdwfw"; depends=[gtools Rsolnp survival]; }; IDPmisc = derive2 { name="IDPmisc"; version="1.1.20"; sha256="0zy6mxqa8arq0vvhsdcifzm3085c23rnwa1n36fhircph1xwvfdw"; depends=[lattice]; }; - IDSpatialStats = derive2 { name="IDSpatialStats"; version="0.3.10"; sha256="1980nsbcibsas99xcqfc54k6zhh9lg2xdgmihp846xhqgw9xjjy7"; depends=[doParallel foreach igraph spatstat]; }; + IDSA = derive2 { name="IDSA"; version="2.1"; sha256="0ld2359ksnw9jrjicnqikh5r321mfy2i7vzlhh9phm60k0qf5j98"; depends=[GD ggplot2 kableExtra reshape2]; }; IDetect = derive2 { name="IDetect"; version="0.1.0"; sha256="1q1jwgildhx6sp883ni7vcsa3gj997855v5ky41dyf34kv7hvdl1"; depends=[]; }; IDmeasurer = derive2 { name="IDmeasurer"; version="1.0.0"; sha256="0n7rziaaxm9dqixmw6rxgq9dwnwdl3dsdnpd9s59k5skdlaxnl5m"; depends=[infotheo lme4 MASS]; }; - IDmining = derive2 { name="IDmining"; version="1.0.6"; sha256="0fsl1byz0n5jwswh2ydzz5lsycja54545cf7dr1r3h1a372yz2mv"; depends=[data_table doParallel foreach]; }; + IDmining = derive2 { name="IDmining"; version="1.0.7"; sha256="1yv8lclkb1ws2n4yd3l561lqhp25vlw0f6d073yg04pidr2dpg2a"; depends=[data_table doParallel foreach]; }; IETD = derive2 { name="IETD"; version="1.0.0"; sha256="0avhyw0zcb8vj0nqfy41yq5kcd8yf9rmaawdvfcy5rqwxmi1mw9l"; depends=[doParallel dplyr foreach ggplot2 lubridate Rdpack]; }; - IFAA = derive2 { name="IFAA"; version="1.0.0"; sha256="138q74hbvr93qlkb01a9gf9463zb4llklz45gqyf4fxps7m0nggw"; depends=[doParallel expm foreach future HDCI mathjaxr Matrix picasso rlecuyer]; }; + IFAA = derive2 { name="IFAA"; version="1.0.1"; sha256="11gs84qvz6hbj23iihn19w9q4bv8gacf52dsknx1v0zcpd7jjwc7"; depends=[doParallel expm foreach future HDCI mathjaxr Matrix picasso qlcMatrix rlecuyer]; }; IFC = derive2 { name="IFC"; version="0.1.1"; sha256="0nr05xz5i9cv4ffjnrxxvxp1mwnym7bmz9jq83z5gi6ca42128xv"; depends=[DT gridExtra jpeg KernSmooth lattice latticeExtra png Rcpp RcppProgress tiff visNetwork xml2]; }; IFP = derive2 { name="IFP"; version="0.2.4"; sha256="066wz6bjqcvq22gjg2wcmglp798f87rsc8yhm13p0dic3arb5ph6"; depends=[coda haplo_stats]; }; IGG = derive2 { name="IGG"; version="1.0"; sha256="1cibb9z18xc1zx1813lk14n6p5am84hm7w0hkrsif4j3p89lrwif"; depends=[GIGrvg glmnet MASS Matrix pscl]; }; - IGP = derive2 { name="IGP"; version="0.1.0"; sha256="0xv89gmyfgnq5kzcmjbp5nx9zbr3gbdzkvffp99bxbkvf759m255"; depends=[PythonInR R6]; }; + IGP = derive2 { name="IGP"; version="0.2.0"; sha256="1hsyl6cjm84w4f4v0gw4hi5y483r8v78xb3k3h1ixix9ymjqr8y5"; depends=[R6 reticulate]; }; IGST = derive2 { name="IGST"; version="0.1.0"; sha256="12ycrfsgwakaj3k39k1j4ky58wr7a2ibyz6j9cznvjjv6cgz9zg5"; depends=[BootMRMR e1071]; }; IHSEP = derive2 { name="IHSEP"; version="0.1"; sha256="1djc5509b5iyi6y0i36h77l6sq1h0w721v2isxqldcqk3gb0bx11"; depends=[lpint Rcpp]; }; ILS = derive2 { name="ILS"; version="0.2"; sha256="0lj3ripkaq6jn00lpxjihjhm8g1gbkppmb1y9kkrymphg80k1by7"; depends=[depthTools fda_usc lattice MASS multcomp]; }; - IM = derive2 { name="IM"; version="1.0"; sha256="1f1vr5zfqnanc5xmmlfkjkvxwbyyysi3mcvkg95p8r687a7zl0cx"; depends=[bmp jpeg png]; }; IMAGE = derive2 { name="IMAGE"; version="1.0"; sha256="0xgrja7qhklcmbm0zz5xg94gw5kl05nk3v77l7vxq2d5sk0435g3"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo]; }; IMEC = derive2 { name="IMEC"; version="0.2.0"; sha256="1k85pr6s6lysn53n59i8rcdhyg7r3il5avbckvvz43p6lh0fgxpy"; depends=[igraph IsingSampler qgraph]; }; IMFData = derive2 { name="IMFData"; version="0.2.0"; sha256="1mlxpsbyvh1zi8ivdblbd58zfv5hflnknbasz5z8xk9911czrn6p"; depends=[httr jsonlite plyr]; }; - IMIFA = derive2 { name="IMIFA"; version="2.1.4"; sha256="00g07ps87wm4r2klkyr3xmf7q369mzxdnq2n7vsi4lig2x05pdq3"; depends=[matrixStats mclust mvnfast Rfast slam viridisLite]; }; - IMIS = derive2 { name="IMIS"; version="0.1"; sha256="09zb48vdj0i3vf8vxrs07xwb9ji27vp2fyvmg6jfq631licsryc2"; depends=[mvtnorm]; }; - IMIX = derive2 { name="IMIX"; version="1.1.0"; sha256="06n03nck5475xsh41pwxlyvdw4y6b0vlh809fmfsjdadjipd218v"; depends=[crayon ggplot2 MASS mclust mixtools mvtnorm]; }; + IMIFA = derive2 { name="IMIFA"; version="2.1.5"; sha256="12fzq0fg3wrk4fmi8kdmifdx1fnj1laf0311smgn3q2mbqihamx5"; depends=[matrixStats mclust mvnfast Rfast slam viridisLite]; }; + IMIX = derive2 { name="IMIX"; version="1.1.4"; sha256="0xdf221l53i4kfln4xnqv2lv3yg3kajmnm5nyal1z25p22czcdl9"; depends=[crayon ggplot2 MASS mclust mixtools mvtnorm]; }; IMP = derive2 { name="IMP"; version="1.1"; sha256="0ilvgz2bngffyx6ifqqx1snsn6mmq7rx3wg44093yrviaw39qdfv"; depends=[dplyr ggplot2 shiny tidyr]; }; IMPACT = derive2 { name="IMPACT"; version="0.1.1"; sha256="0ai22gvmfj9j00cw742szfqqay63b5lmnszkwwdfdvidls43v0bm"; depends=[]; }; IMTest = derive2 { name="IMTest"; version="1.0.0"; sha256="0n0swbi051cr7mrjmszqg79hxa38ccyq69ws8c37ixwb0lpxmx48"; depends=[lme4 ltm MASS reshape2]; }; @@ -2067,27 +2121,32 @@ in with self; { IMmailgun = derive2 { name="IMmailgun"; version="0.1.2"; sha256="09acmi6xj186fb8nhj8q0nxmkp2p32a1l95glzvz84gax4xakhz8"; depends=[httr]; }; INCATome = derive2 { name="INCATome"; version="1.0"; sha256="1gbmcirs49ydmk5rg2vl5gdy39dfx9psw5mijibzjszcfjar3kqs"; depends=[genefilter limma multtest RankProd siggenes]; }; INLABMA = derive2 { name="INLABMA"; version="0.1-11"; sha256="0wzyb3c7zpksqz198kigi4rpblvk0rjamngmyabw5xdpizxdg6zi"; depends=[Matrix sp spdep]; }; - INLAMSM = derive2 { name="INLAMSM"; version="0.1"; sha256="0km7kwwif2hqqa9jhglvkinzcm6gfp7mn219hqm5ds5rfgrcyl75"; depends=[Matrix MCMCpack]; }; + INLAMSM = derive2 { name="INLAMSM"; version="0.2-2"; sha256="1njvcrh6ppx17bxvgf18gzgqddby5fsa35h2xf58w4ikynkgm7l1"; depends=[Matrix MCMCpack sp spdep]; }; + INQC = derive2 { name="INQC"; version="2.0.4"; sha256="06kb07ib4ml5gqi51hkfmilwzf70gpwclb35xsp2f65p96rvj6qb"; depends=[evd gdata suncalc]; }; INSPIRE = derive2 { name="INSPIRE"; version="1.5"; sha256="0938l50yxnb5q628mp874ayx9ybvcjddis20y1hzm5cmlsg0hqhg"; depends=[missMDA]; }; INTRIGUE = derive2 { name="INTRIGUE"; version="0.1.0"; sha256="1l1vfl0m4iqniwp4bp1bfjpqhwahg341fpyxhryr0j8lypqaw7si"; depends=[dplyr rlist SQUAREM]; }; IOHanalyzer = derive2 { name="IOHanalyzer"; version="0.1.4"; sha256="1wp9i4vy40a10y5lj4m2hs2nx5nz1qyqz6gd27284zkydrwhpnxr"; depends=[bsplus colorRamps colorspace colourpicker data_table dplyr DT ggplot2 igraph kableExtra magrittr markdown PlayerRatings plotly RColorBrewer Rcpp reshape2 shiny shinyjs stringi]; }; IOHexperimenter = derive2 { name="IOHexperimenter"; version="0.1.4"; sha256="0aacliznncl488rjsnx02pfj1mchhcyb36v816g959ll38pvc6bk"; depends=[assertthat BH magrittr Rcpp]; }; + IPCAPS = derive2 { name="IPCAPS"; version="1.1.8"; sha256="17ifkgjjnvvcc8dp065ng4ad9lr85lcdcb401vi84yy8m2llbypw"; depends=[apcluster expm fpc KRIS LPCM MASS Matrix Rmixmod]; }; IPCWK = derive2 { name="IPCWK"; version="1.0"; sha256="0hah1xl6zli0346jh57rjc5x8vynhaysj0l481rmvznsghv6im23"; depends=[MASS survival]; }; - IPDFileCheck = derive2 { name="IPDFileCheck"; version="0.6.4"; sha256="1pkdgj4glqarzwn1zrbyrwb59583l8v3qk2p3g3iir1gvpdm9icx"; depends=[dplyr eeptools GlobalOptions lubridate testthat]; }; + IPDFileCheck = derive2 { name="IPDFileCheck"; version="0.6.6"; sha256="1x4igy711ri9lwy7whz0x2qaqqj1ii7y8iki5kjgqvmdjbba8r2r"; depends=[dplyr eeptools GlobalOptions hash kableExtra lubridate testthat]; }; IPDfromKM = derive2 { name="IPDfromKM"; version="0.1.10"; sha256="1pqi6cshiha4gnra25fgpggyi42mn2hg25s9m9mh091rn5km44q0"; depends=[dplyr ggplot2 gridExtra readbitmap survival]; }; IPEC = derive2 { name="IPEC"; version="0.1.3"; sha256="0h1b9h33zxx23rj8c9790nsqykwhznavy8hfkgv9gx7nphrsy5ma"; depends=[MASS numDeriv]; }; + IPLGP = derive2 { name="IPLGP"; version="1.2.0"; sha256="0lch3q2r846p22cr69anszcwikw58fwaazvg7gahi90zjwck4dfr"; depends=[ggplot2 sommer]; }; IPMRF = derive2 { name="IPMRF"; version="1.2"; sha256="1zvwwhiy0p134zvm5ldc92pdd1ap72bhbrlf02rz9m2hlsxmwy67"; depends=[gbm party randomForest]; }; IPPP = derive2 { name="IPPP"; version="1.1"; sha256="19ccs25fd56ns7ssi51w2jzjd4d57vyimwmfvf27mmigb537bd5y"; depends=[]; }; IPV = derive2 { name="IPV"; version="0.1.1"; sha256="0bd59sfqqz2g6lwzlg3vqpw0y8q989n4q76qr1dvnq847c6fg8wz"; depends=[ggforce ggplot2]; }; IPWboxplot = derive2 { name="IPWboxplot"; version="0.1.0"; sha256="0lyqcjnbissick5hzwrx21pykq4pww9j0i03j0gy43awl1cq5qq8"; depends=[isotone]; }; + IPWpn = derive2 { name="IPWpn"; version="0.1.0"; sha256="0glw8sb8jadnvznfj31l6lal0vqnmsmk96byinw7wy8avkz455fn"; depends=[dplyr MplusAutomation mvtnorm tibble tidyr tidyverse]; }; IQCC = derive2 { name="IQCC"; version="0.7"; sha256="1zalpmyywkrnci0jd8irakjhiqmr52zhj1sbxf9pz5c7wks2rdbc"; depends=[MASS miscTools qcc]; }; IRATER = derive2 { name="IRATER"; version="0.0.1"; sha256="0jxdvjmnmangbqy3ibb5qrj9jz3wrzs0wa1r2gjk4v8vsbk0ipcf"; depends=[coda lattice plyr R2admb]; }; - IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.4.3"; sha256="1wqm8qd1w07whfg7yn916zp1ks9ffpxz6y6ghsal0d9n9rlmc21w"; depends=[dplyr IRISSeismic pracma RCurl seismicRoll signal stringr XML]; }; - IRISSeismic = derive2 { name="IRISSeismic"; version="1.6.0"; sha256="0dgfy7ifghblsd9nxcylbdqlcpxhyladv91r6w2aqykpbkin705r"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; + IRCcheck = derive2 { name="IRCcheck"; version="1.0.0"; sha256="035sx36qf5hdnc51h8251qwxfm30r8h2v2qs2x161ip4cqghw019"; depends=[corpcor GGMncv glmnet MASS Rdpack]; }; + IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.4.4"; sha256="0pnqmzzzbyqdg5hy4jjmlw38cpi81gsphfs4bqwbhmx77dp7ib06"; depends=[dplyr IRISSeismic pracma RCurl seismicRoll signal stringr XML]; }; + IRISSeismic = derive2 { name="IRISSeismic"; version="1.6.2"; sha256="1q9y18ikiyjscv9nyvwldhlhzqba8rsq0fakf29yhc0sk2dl5sq9"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; IRSF = derive2 { name="IRSF"; version="1.0.3"; sha256="1cq196z2i4by7dfij6w849a49d8dzzcdk5a68nxvmvwq3xskywam"; depends=[abind randomForestSRC survival]; }; IRTBEMM = derive2 { name="IRTBEMM"; version="1.0.7"; sha256="09siwm2shjb8hhk64r66fspzykzr2r0m011pv8qcl9k7g040mxpi"; depends=[]; }; IRTShiny = derive2 { name="IRTShiny"; version="1.2"; sha256="094ax94y6k5z4vlxfla2w19f57q0z32nwwd5npjbgmnkhvfhhl9v"; depends=[beeswarm CTT ltm psych shiny shinyAce]; }; - IRdisplay = derive2 { name="IRdisplay"; version="0.7.0"; sha256="12chk53nf4zckgc4yl7gbvd7m5dvli52inp5b3f0zvcjvfncksli"; depends=[repr]; }; + IRdisplay = derive2 { name="IRdisplay"; version="1.0"; sha256="15jbjrihm1mk899357h9xb08iq3xyagds1xb40fmdpkfcmcfqrw9"; depends=[repr]; }; IRkernel = derive2 { name="IRkernel"; version="1.1.1"; sha256="1y06v3difaiihxfm2abm88nnjzvkla4p346cm1nxmga4iwb2k8gm"; depends=[crayon digest evaluate IRdisplay jsonlite pbdZMQ repr uuid]; }; ISAT = derive2 { name="ISAT"; version="1.0.5"; sha256="0xlq568spfz527jxbqamrn1j87hnasg0kp2bcyjycaghmhsc6zmg"; depends=[gtools stringr]; }; ISBF = derive2 { name="ISBF"; version="0.2.1"; sha256="12mk4d0m5rk4m5bskkkng5j6a9dzh8l1d74wh8lnamq7kf9ai9if"; depends=[]; }; @@ -2095,18 +2154,18 @@ in with self; { ISEtools = derive2 { name="ISEtools"; version="3.1.1.1"; sha256="00d6znqz2mfmyi9ijgrg2pwl4lnvvsy00ysa7a7vjq7ip8qvcjfq"; depends=[coda Xmisc]; }; ISLR = derive2 { name="ISLR"; version="1.2"; sha256="1bfay6cs40crhh34v2ksn4zdxivimfyjvk19wqbnjr7vs837l3xh"; depends=[]; }; ISM = derive2 { name="ISM"; version="0.1.0"; sha256="0by0w6zgnwcwzbmxx16s8mb1avhc6aiavqp0qkxx6hr70vrgb997"; depends=[rJava xlsx xlsxjars]; }; - ISOcodes = derive2 { name="ISOcodes"; version="2020.12.04"; sha256="18373rkhmwm7y2drvfbhrxkqw9d23avf0ndvh0fg00z4djvddkjx"; depends=[]; }; + ISOcodes = derive2 { name="ISOcodes"; version="2021.02.24"; sha256="19irnn2yi1bzhf03g666la84kj8040f5913kfrmd16dfnjy6j9qm"; depends=[]; }; ISOpureR = derive2 { name="ISOpureR"; version="1.1.3"; sha256="1ydhsh3v6n7prrg0dm7hsg8wx1244g791xnz1sjyhljhm31hgwc0"; depends=[futile_logger Rcpp RcppEigen]; }; ISOweek = derive2 { name="ISOweek"; version="0.6-2"; sha256="1f1h8pgjaa14cvaj8ldl87b4vslxwvyfj46m0hkylwp73sv3g2mm"; depends=[stringr]; }; ISR3 = derive2 { name="ISR3"; version="0.98"; sha256="0mmpdl9ndlj9i0k3zl7ja0g7y9pm67igw925ld5qnz7a36plygxs"; depends=[]; }; - ISRaD = derive2 { name="ISRaD"; version="1.5.6"; sha256="1rjhxg4q0lg4y5y5minqv40wq5ngci8rkj1dgbzpsnphjy55541x"; depends=[dplyr ggplot2 maps raster RCurl readxl tidyr writexl]; }; + ISRaD = derive2 { name="ISRaD"; version="1.7.8"; sha256="119vvxviimnvy6x63hijsgmj8w02ni1g30imv8v39rp17hklr6pc"; depends=[dplyr ggplot2 httr maps raster RCurl readxl tidyr writexl]; }; ISwR = derive2 { name="ISwR"; version="2.0-8"; sha256="1bay7na68awq68bw82dwhcfxp2d3di2dg33islq0mgrhd4sfdfza"; depends=[]; }; - ITGM = derive2 { name="ITGM"; version="0.41"; sha256="0q278ga51asrr918l088v6qdl17vnmrcbz7y1xc4rzmb61lkwqy7"; depends=[data_table Fgmutils gsubfn plyr sqldf]; }; + ITGM = derive2 { name="ITGM"; version="0.42"; sha256="1xyrr37h7kz4kkwvzbi9jaicai45wpjg0ygal5hqzpscij09pkhr"; depends=[data_table Fgmutils ggplot2 gsubfn plyr randomcoloR rbokeh sqldf]; }; ITNr = derive2 { name="ITNr"; version="0.6.0"; sha256="0yxn3768819ph49bizprj3arrvz9rzhb45rkcpfivwfwlyf010yy"; depends=[blockmodeling circlize cowplot dplyr fastmatch GGally ggplot2 igraph intergraph maps network networkDynamic plyr RColorBrewer reshape2 sna tnet WDI]; }; ITRLearn = derive2 { name="ITRLearn"; version="1.0-1"; sha256="03xdbpn3qddcq9krdpnywd3xbzfh2viym2qqx6rcqs7w7bdhhlk6"; depends=[Formula kernlab]; }; ITRSelect = derive2 { name="ITRSelect"; version="1.0-1"; sha256="0llr4hrlbnb728j5rw7vd3r9qlqf571hrldnm72kicis5di2v5di"; depends=[Formula Matrix ncvreg Rglpk svMisc]; }; IUPS = derive2 { name="IUPS"; version="1.0"; sha256="01pv03ink668fi2vxqybli0kgva13gxhqfdxkwz6qk5rnpzwvf5w"; depends=[boot Matching R2jags]; }; - IalsaSynthesis = derive2 { name="IalsaSynthesis"; version="0.1.6"; sha256="15iwywvzhgiyigl8f488b7ra89rz0a7ymfsdgdlqfls3fmld7b4a"; depends=[testit]; }; + IVYplot = derive2 { name="IVYplot"; version="0.1.0"; sha256="1v739xlim3mcw09cyp4z3cbb25ipkpwm9h378fwy2ycp8lmq32gy"; depends=[plyr]; }; Iboot = derive2 { name="Iboot"; version="0.1-1"; sha256="1fahh86kgv2axj2qg14n87v888sc0kb567s6zr3fh5zv361phwkq"; depends=[]; }; IceCast = derive2 { name="IceCast"; version="2.1.0"; sha256="0h3z68lfjw5s51601m17m2gvn12vkwj5gzc70dqzfjmxdkgv3p28"; depends=[coda maptools MASS ncdf4 raster Rcpp RcppArmadillo rgeos sp]; }; IgAScores = derive2 { name="IgAScores"; version="0.1.2"; sha256="0ckqjbn0xc894dc23gbaqzr6z6rl5h0k8gc5gjhbhwvrc2zlyfsp"; depends=[]; }; @@ -2115,7 +2174,6 @@ in with self; { Imap = derive2 { name="Imap"; version="1.32"; sha256="0b4w0mw9ljw6zxwvi0qzb08yq9n169lzgkdcwizrd07x9k9xjxs7"; depends=[]; }; Immigrate = derive2 { name="Immigrate"; version="0.2.1"; sha256="0pnnvv63kkg7pgyblb1vlx54c6169n40fn58aypdy5xcnknabvxn"; depends=[pROC Rcpp]; }; ImpactEffectsize = derive2 { name="ImpactEffectsize"; version="0.6.1"; sha256="12pl4kif6s8jllncm3r5133vrknq98h8awbskq4sh55p1ldaldfq"; depends=[caTools matrixStats parallelDist Rcpp]; }; - ImpactIV = derive2 { name="ImpactIV"; version="1.0"; sha256="1bb6gw1h15hscr71hy779k2x5ywzx63ylim3hby02d7fnnj46p58"; depends=[nnet]; }; ImportExport = derive2 { name="ImportExport"; version="1.3"; sha256="07i7p9xha1f23r07lw87ak13hd4wavdvwh8vb8sg2gyvnpa5njwp"; depends=[chron gdata haven Hmisc readxl RODBC writexl]; }; ImputeRobust = derive2 { name="ImputeRobust"; version="1.3-1"; sha256="1zvwlpffpm4gqysz57clf8jkqr72yjbzx90pdy95la51m0b6cdbd"; depends=[extremevalues gamlss gamlss_dist lattice mice purrr]; }; InDisc = derive2 { name="InDisc"; version="1.0.3"; sha256="05xcf7gqq9ik8azmyas7ggzg54rlwrrcglzsn0znjd5h2vjp310a"; depends=[matrixStats optimbase psych]; }; @@ -2125,24 +2183,23 @@ in with self; { IncomPair = derive2 { name="IncomPair"; version="0.1.0"; sha256="156mc4csbxz976md7ikjd6sqamzsfc8ik9xf1qbhrfl8y7957kbb"; depends=[]; }; IndTestPP = derive2 { name="IndTestPP"; version="3.0"; sha256="1z48pr8znbk1gdvjfdvszxlzhj7v88p3y7zhi1f0xw75dkfpnwwy"; depends=[]; }; IndepTest = derive2 { name="IndepTest"; version="0.2.0"; sha256="017jasqsxm5m13rhfy9gxvd8nfib5k5y5c8520p3hcffqrxr683p"; depends=[FNN mvtnorm Rdpack]; }; - IndependenceTests = derive2 { name="IndependenceTests"; version="0.5"; sha256="1azqn5jnwyf9mqhz3d016sp0bgjq4fl1w8h1xzbs9gprhgb4mnrx"; depends=[CompQuadForm MASS Runuran xtable]; }; IndexConstruction = derive2 { name="IndexConstruction"; version="0.1-3"; sha256="08bi3x7a9plxshgj6hq58mzkf1117a7p0fd1akqjh7k8mgywifwf"; depends=[fGarch KernSmooth lubridate RcppBDT xts zoo]; }; - IndexNumR = derive2 { name="IndexNumR"; version="0.1.3"; sha256="1jrbl2gwgp4msigkspgqcvgvxq169jiiz4acixky37i6hw0n34p6"; depends=[]; }; - IndexNumber = derive2 { name="IndexNumber"; version="1.2"; sha256="0xiy84gfks24c1cmqdki95nysa8gkihcgcsdfbm0wn8w8n3vb6va"; depends=[]; }; + IndexNumR = derive2 { name="IndexNumR"; version="0.2.0"; sha256="0pnf4whq69q59ay96x6xnqvs1vciqsqhjr93n3kiah7zikr7jj7j"; depends=[]; }; + IndexNumber = derive2 { name="IndexNumber"; version="1.3.2"; sha256="0ff6fnkgbfwn3sasglr1aygvm9bawrvcj432xgka1vk28qnns0if"; depends=[]; }; IndianTaxCalc = derive2 { name="IndianTaxCalc"; version="1.0.2"; sha256="1fxw884wj9n8drk2xz3rgr4f7b4fckh5firrf5gdz6d1nk9hdvc1"; depends=[]; }; InfDim = derive2 { name="InfDim"; version="1.0"; sha256="0rh3ch0m015xjkxy08vf9pc6q7azjc6sgicd2j6cwh611pqq39wq"; depends=[]; }; InferenceSMR = derive2 { name="InferenceSMR"; version="1.0"; sha256="13d3v8kyk6br33659jgql6j1nqmnd8zszqrwfw2x3khkiqzgdmhk"; depends=[survival]; }; InfiniumPurify = derive2 { name="InfiniumPurify"; version="1.3.1"; sha256="0yqah4rwpishas0xyv5a7cn4v18brj33cd7f494g21b9brggafq1"; depends=[matrixStats]; }; Inflation = derive2 { name="Inflation"; version="0.1.0"; sha256="0ikhsslbg32kr9vcaxq8qwaa7ahiwvq91xwv53550wci2vyzmybp"; depends=[seasonal]; }; + Inflect = derive2 { name="Inflect"; version="1.1.0"; sha256="09904nn33libjv29n74n5nq1hj6ka8a4h3jllwpbxk9hsmnlmf9h"; depends=[data_table ggplot2 optimr plotrix readxl tidyr UpSetR writexl]; }; InfoTrad = derive2 { name="InfoTrad"; version="1.2"; sha256="0blfn59w73hjga15sw8plwvn6yq9fj95nxwp018mp1harl8wa5db"; depends=[nloptr]; }; Information = derive2 { name="Information"; version="0.0.9"; sha256="0pszwzj3r7vdvdsy9w1qz95zxp7y2bsyg36b58mm4qcvcvymd4kn"; depends=[data_table doParallel foreach ggplot2 iterators plyr]; }; InformationValue = derive2 { name="InformationValue"; version="1.2.3"; sha256="1b5g2wyp7x5cdhmf4325n3q7afa6i352lh80j28c8s4356pr3w9j"; depends=[data_table ggplot2]; }; InformativeCensoring = derive2 { name="InformativeCensoring"; version="0.3.5"; sha256="1c8mfb82px9z27lc7br514mcbl65q7lfa3df9w3vvnk5g7ljswha"; depends=[boot dplyr survival]; }; - Infusion = derive2 { name="Infusion"; version="1.4.1"; sha256="0nxp416mbzawrdk4qwhg5j7lm8zdyplrngka2hw2rlsqmlwhvqzl"; depends=[blackbox foreach mvtnorm numDeriv pbapply proxy spaMM viridis]; }; + Infusion = derive2 { name="Infusion"; version="1.5.1"; sha256="02rlzil1qzgyxrf87mdvxdm0mgjnljk211j9c7hh72h0mq5rlg0d"; depends=[blackbox foreach mvtnorm numDeriv pbapply proxy spaMM viridis]; }; InjurySeverityScore = derive2 { name="InjurySeverityScore"; version="0.0.0.2"; sha256="0g52cksa774in18ykrym61l3my9zm343bgsq5mg7mki9x65xd35z"; depends=[dplyr rlang tidyr]; }; InspectChangepoint = derive2 { name="InspectChangepoint"; version="1.1"; sha256="0zrfyzz3l9jff7044dhrjv8rp8f258fz993ycyxyd29nd7x9n9nj"; depends=[MASS]; }; IntCal = derive2 { name="IntCal"; version="0.1.3"; sha256="1drr1wly23sddn4kfqjx1iijpp21zgw1342d354s6id2l3r4cf11"; depends=[]; }; - IntClust = derive2 { name="IntClust"; version="0.1.0"; sha256="0whmc084gq5zip82vnwailnwvw9jawk9rx4wqiz1lr693w9xbq66"; depends=[a4Core ade4 analogue Biobase circlize cluster data_table e1071 FactoMineR ggplot2 gplots gridExtra gtools igraph limma lsa plotrix pls plyr Rdpack SNFtool]; }; IntLik = derive2 { name="IntLik"; version="1.0"; sha256="13ww5bsbf1vnpaip0w53rw99a8hxzziibj7j66cm31jmi8l6fznf"; depends=[maxLik]; }; IntNMF = derive2 { name="IntNMF"; version="1.2.0"; sha256="09qzyvv7d4wr68qrlhcd4ivr65is3mypv1vaxpswwcjmcmyr4gzp"; depends=[cluster InterSIM MASS mclust NMF]; }; IntegrateBs = derive2 { name="IntegrateBs"; version="0.1.0"; sha256="1pkx4wpahd1sabzx55law3710x3vbh9yi6kii8gs2xfq3cb1llmq"; depends=[]; }; @@ -2155,10 +2212,9 @@ in with self; { InteractiveIGraph = derive2 { name="InteractiveIGraph"; version="1.0.6.1"; sha256="0srxlp77xqq0vw2phfv7zcnqswi2i5nzkpqbpa5limqx00jd12zy"; depends=[igraph]; }; Interatrix = derive2 { name="Interatrix"; version="1.1.3"; sha256="1pjyfg5p6081hng9h6wcmfnlfkcs300c3x9ksdj01587b97ph9s1"; depends=[MASS]; }; InterfaceqPCR = derive2 { name="InterfaceqPCR"; version="1.0"; sha256="12nmkv6qnzh2dnbhk1656dla6mrznh24gqblmn4xai7wg4p92fbx"; depends=[plyr reshape2 tkrplot xlsx]; }; - Interpol = derive2 { name="Interpol"; version="1.3.1"; sha256="1598lnnrcxihxysdljphqxig15fd8z7linw9byjmqypwcpk6r5jn"; depends=[]; }; Interpol_T = derive2 { name="Interpol.T"; version="2.1.1"; sha256="1fbsl1ypkc65y6c0p32gpi2a2aal8jg02mclz7ri57hf4c1k09gz"; depends=[chron date]; }; InterpretMSSpectrum = derive2 { name="InterpretMSSpectrum"; version="1.2"; sha256="1iaw4i14l2vp1f163g2q4pwv9cnqrx14ik4s8zw0iha4zwcrc3ja"; depends=[DBI doParallel enviPat foreach plyr Rdisop RSQLite]; }; - IntervalSurgeon = derive2 { name="IntervalSurgeon"; version="1.0"; sha256="0dpgfgnnx6r29y8y3pac1rgi503wvlwggx5dh6fhqnxw5yfink61"; depends=[Rcpp]; }; + IntervalSurgeon = derive2 { name="IntervalSurgeon"; version="1.1"; sha256="0dhsy40wx47g7h8ivriscyvxwl991lfal4nq0j476kamxax0yzbw"; depends=[Rcpp]; }; InvariantCausalPrediction = derive2 { name="InvariantCausalPrediction"; version="0.8"; sha256="01ckyvjl9lxdpkr0v1da4n4lw3b5z1bxlmf0v6ibqly1mhfwybjl"; depends=[glmnet mboost]; }; InvasionCorrection = derive2 { name="InvasionCorrection"; version="0.1"; sha256="1wwx2kssjysl1lraac36pvxq34vg8qm0vwi861rs1iipfc35i84j"; depends=[lattice]; }; Inventorymodel = derive2 { name="Inventorymodel"; version="1.1.0"; sha256="1l87xghdksgmb2k3a8j382p7ffi2pma38a6pn31sfjsa6bgmrdnk"; depends=[e1071 GameTheoryAllocation]; }; @@ -2173,12 +2229,14 @@ in with self; { IsoCorr = derive2 { name="IsoCorr"; version="1.0"; sha256="0rhbclbpfd9d0dawbwwprlzx2j9k59gsmrb11yabiv5305b7vpx8"; depends=[]; }; IsoGene = derive2 { name="IsoGene"; version="1.0-24"; sha256="0flm0mszankvl3aizwsazyhvz2xkr4gfqiqywpc0r1swqj19610r"; depends=[affy Biobase ff Iso xtable]; }; IsoSpecR = derive2 { name="IsoSpecR"; version="2.1.3"; sha256="0cy9y3lh20xxj9sah8s2zrwnbzk39s5xmscj4mskvn897bmlksh6"; depends=[Rcpp]; }; - IsoplotR = derive2 { name="IsoplotR"; version="3.6"; sha256="0dm8kr2m13rwgw4g45k71l3chd4zs9vqrhr2hwi37zxgn84z3cy3"; depends=[MASS]; }; - IsoplotRgui = derive2 { name="IsoplotRgui"; version="3.6"; sha256="1xn11ybr9ab73dchhgmd7k62sqlbg00hz8rfdpzncfgfdxyanhrm"; depends=[httpuv IsoplotR jsonlite later]; }; + IsoplotR = derive2 { name="IsoplotR"; version="3.8"; sha256="1icibh8phazcj2q0s0kba4pk65nr609rpdpc3vcj31gi379jw5ks"; depends=[MASS]; }; + IsoplotRgui = derive2 { name="IsoplotRgui"; version="3.8"; sha256="1dfzc6m0fc81z7i1ificfibh76y675bdqj4v2zhnjqhzyiw2pib9"; depends=[httpuv IsoplotR jsonlite later]; }; IsoriX = derive2 { name="IsoriX"; version="0.8.2"; sha256="1yk2xlz658c1kvm3kb89qmacy5g9qnzjawi2pk5xkn7g9v214adr"; depends=[lattice latticeExtra numDeriv raster rasterVis sp spaMM viridisLite]; }; IsotopeR = derive2 { name="IsotopeR"; version="0.5.4"; sha256="0xgha5alh5y5qfz00rl73q4xlamnmrwij7kckljmy6zgrlrdnl6x"; depends=[colorspace ellipse fgui plotrix runjags]; }; JADE = derive2 { name="JADE"; version="2.0-3"; sha256="1fj2wawx5ac1fvlp28naqha0i17f1sb47j2qqzgccvx17ycqmmjn"; depends=[clue]; }; JASPAR = derive2 { name="JASPAR"; version="0.0.1"; sha256="0wiyn7cz45hwy9zkvacx28zdrg78q6715cg4r9xgcb39q25s0dcy"; depends=[gtools]; }; + JBrowseR = derive2 { name="JBrowseR"; version="0.7.1"; sha256="0ms7ydbbx95040n127smg7phqphw36sjh284py3ckk0k6fwlnzxg"; depends=[cli htmltools htmlwidgets httpuv jsonlite magrittr mime reactR readr stringr]; }; + JCRImpactFactor = derive2 { name="JCRImpactFactor"; version="1.0.0"; sha256="1i7853i8k03nq7ax9rypm9qcl5qgyddblgbfjp3yxi1s3a6bkwk1"; depends=[stringr]; }; JFE = derive2 { name="JFE"; version="2.5.1"; sha256="1393gdfm2kv0c0vadkzcj2kcxscrlgg02kihkhbsvnjzadhi1lb1"; depends=[caret fPortfolio magrittr tcltk2 xts zoo]; }; JGEE = derive2 { name="JGEE"; version="1.1"; sha256="078348n623hlyc3n9yh67vv5acsnxapmbwybvrb1i7kawmqw5msi"; depends=[gee MASS]; }; JGL = derive2 { name="JGL"; version="2.3.1"; sha256="02p9z32f8j60wnh1szkjr2zfa9zwyw0gqinpsvll4dymf8cjawpw"; depends=[igraph]; }; @@ -2186,8 +2244,10 @@ in with self; { JM = derive2 { name="JM"; version="1.4-8"; sha256="1nq07hw30fqnag1h08b7crl2yfs85gyrn70aaw11bdbjv06r2x55"; depends=[MASS nlme survival]; }; JMI = derive2 { name="JMI"; version="0.1.0"; sha256="05phkwfb9v4g9jixlvbj6br7sbi64zvrgjwfr0v87ijddkxc9si9"; depends=[Rcpp RcppArmadillo]; }; JMbayes = derive2 { name="JMbayes"; version="0.8-85"; sha256="0s11jpzflc2zg60g4ffcw23c2f4zz3mzddrc2cl5y43xl2v304lb"; depends=[doParallel foreach Hmisc jagsUI MASS nlme Rcpp RcppArmadillo rstan shiny survival xtable]; }; - JMcmprsk = derive2 { name="JMcmprsk"; version="0.9.9"; sha256="0zpl2dp6z7qrpmcsv07fbznr68pa4gz3znd7a55pwdknc41nk4m6"; depends=[dplyr MASS pracma Rcpp reshape2 statmod]; }; + JMbayes2 = derive2 { name="JMbayes2"; version="0.1-5"; sha256="0szjzk7a5ncbgp2p6k3dc3sfsyrb7kanw8jawd0d0gdld9vbdm4i"; depends=[coda ggplot2 GLMMadaptive gridExtra matrixStats nlme Rcpp RcppArmadillo survival]; }; + JMcmprsk = derive2 { name="JMcmprsk"; version="0.9.10"; sha256="1hkylfrr2036vgkxfs98szm3883bmyvvyr0f3a8xygccf3pn28xc"; depends=[dplyr MASS pracma Rcpp reshape2 statmod]; }; JMdesign = derive2 { name="JMdesign"; version="1.1"; sha256="0w5nzhp82g0k7j5704fif16sf95rpckd76jjz9fbd71pp2d80vlh"; depends=[]; }; + JOPS = derive2 { name="JOPS"; version="0.1.13"; sha256="0cnlnkx9cnhvk9636y21nq6pm3yb0nhzgn6l3949a9nqlxishhzr"; depends=[boot colorspace fds fields ggplot2 MASS rpart SemiPar spam SpATS]; }; JOUSBoost = derive2 { name="JOUSBoost"; version="2.1.0"; sha256="0f3rr7aw20nvmlpqrq3wzgmr55lqdqhk3wphpqq7msgvaf1zrcl7"; depends=[doParallel foreach Rcpp rpart]; }; JPEN = derive2 { name="JPEN"; version="1.0"; sha256="12rvp5bmlkwyr1gg336k655hp09gym0d2wwry70c1rz30x1sf2zs"; depends=[mvtnorm]; }; JQL = derive2 { name="JQL"; version="3.6.9"; sha256="0d926hngv4r6zl5f6yai3jwhl9hql2hv6ja3yjgplglkns66g4lh"; depends=[caret pdist randomForest]; }; @@ -2196,7 +2256,7 @@ in with self; { JSconsole = derive2 { name="JSconsole"; version="0.1.0"; sha256="1jpa48xb7hh4ap25sqrl67rzqra53qhcfwpfgs6hmpjnrld8n3ha"; depends=[rstudioapi V8]; }; JSmediation = derive2 { name="JSmediation"; version="0.1.1"; sha256="06p413jfv02k88jdsbplnz696knxglgcqa4pjrgkhhic6awdh0jf"; depends=[broom data_table dplyr glue knitr magrittr MASS purrr rlang tibble]; }; JWileymisc = derive2 { name="JWileymisc"; version="1.2.0"; sha256="0c140kcq0fw91r4g33xri8yxms0nk291zi708h00pszliwpg4qhq"; depends=[data_table emmeans extraoperators ggplot2 ggpubr ggthemes lavaan lme4 MASS mgcv mice multcompView psych quantreg rms robustbase VGAM]; }; - JacobiEigen = derive2 { name="JacobiEigen"; version="0.3-3"; sha256="1zcs9qhf2216c590hj6qc837rnciyfsirg4zg655vxn59fgzpvyb"; depends=[Rcpp]; }; + JacobiEigen = derive2 { name="JacobiEigen"; version="0.3-4"; sha256="1jm63w2jn89pk725x3d9myq010mb0g5ir8vhv29mkiwgrqig6iw1"; depends=[Rcpp]; }; JamendoR = derive2 { name="JamendoR"; version="0.1.0"; sha256="1v5i4ggc4igp83pik32fqp07ff8iv7dp93b3qhxcsy1msa4l88lx"; depends=[dplyr httr jsonlite]; }; JavaGD = derive2 { name="JavaGD"; version="0.6-4"; sha256="1q48iykjzy22avmx0yy03vv9c7h87qsphg5hsrzfmx5gvck61m06"; depends=[rJava]; }; Jaya = derive2 { name="Jaya"; version="0.1.9"; sha256="0b23l7xp4waxjy1vkk09xaali5axr5900v9hkki4f75wh4gb1l53"; depends=[GA]; }; @@ -2205,32 +2265,36 @@ in with self; { JoF = derive2 { name="JoF"; version="0.1.0"; sha256="1my6fc4awrc822ibsvx3hiz4l49vp8dx0j05v56r7d27xizy8j0j"; depends=[]; }; JoSAE = derive2 { name="JoSAE"; version="0.3.0"; sha256="1vjxzbfs8a7kpmn2lb9dca67d4njmzjr3pl16s0r9ihmmxxwwili"; depends=[nlme]; }; Johnson = derive2 { name="Johnson"; version="1.4"; sha256="12ajcfz5mwxvimv8nq683a2x3590gz0gnyviviyzf5x066a4q0lj"; depends=[]; }; - JointAI = derive2 { name="JointAI"; version="1.0.1"; sha256="136100b7lhq2r8nk69l2zwfrkmdvhb9y0f4nfrkzi0hrsm2434sx"; depends=[coda foreach future MASS mathjaxr mcmcse rjags rlang survival]; }; + JointAI = derive2 { name="JointAI"; version="1.0.2"; sha256="0rfnfswb35yym174mc0r59c0pxx0l4szvzcg8n99nr0rdl0vhr8z"; depends=[coda foreach future MASS mathjaxr mcmcse rjags rlang survival]; }; JointModel = derive2 { name="JointModel"; version="1.0"; sha256="1zgs5c7saqyqxvxmhw5sxy5w67abq344aid6igw1da05bfy2az6h"; depends=[lme4 statmod survival]; }; JointNets = derive2 { name="JointNets"; version="2.0.1"; sha256="18n9dsy0w0nh7dznp6gw6g5fhhjhf5y589nb49hri0721kq1h3rb"; depends=[brainR igraph JGL lpSolve MASS misc3d oro_nifti pcaPP rgl shiny]; }; Julia = derive2 { name="Julia"; version="1.1"; sha256="0i1n150d89pkds7qyr0xycz6h07zikb2y07d5fcpaqs4446a8prg"; depends=[]; }; - JuliaCall = derive2 { name="JuliaCall"; version="0.17.1"; sha256="0v0mn3q9mp8xq6bpm870v9a228b20n22cph3s0ngphni07pi0kwr"; depends=[knitr Rcpp]; }; - JuliaConnectoR = derive2 { name="JuliaConnectoR"; version="0.6.2"; sha256="0xz7w8a8ilklrh71s9jpd0bai0lnljakpgyn89q4d3k9074mznf0"; depends=[]; }; + JuliaCall = derive2 { name="JuliaCall"; version="0.17.2"; sha256="1wvpsncyx2i7ar7ylnhlg46qddakplm3ckhqdwbg0hfkkif4fq0h"; depends=[knitr Rcpp]; }; + JuliaConnectoR = derive2 { name="JuliaConnectoR"; version="0.6.3"; sha256="0x9k96w9i09kvia5z5ma28dxdgbidakbh1x72zga5134shkb34hj"; depends=[]; }; JumpTest = derive2 { name="JumpTest"; version="1.1"; sha256="0y375m5477nq0ybnjmfnd8hi45d8jmdnprqvw5f70llpd7bcghh0"; depends=[MASS Rcpp RcppEigen]; }; + JumpeR = derive2 { name="JumpeR"; version="0.1.4"; sha256="1c1i1m46ccjph4hnlr66pdch7ld4k5fv95fcgk8amlig8hcqiq7c"; depends=[dplyr magrittr pdftools purrr rvest stringr SwimmeR xml2]; }; KANT = derive2 { name="KANT"; version="2.0"; sha256="169j72pmdkcj6hv8qgmc02aps0ppvvl1vnr1hzrb1gsf7zj7bs3y"; depends=[affy Biobase]; }; KCSKNNShiny = derive2 { name="KCSKNNShiny"; version="0.1.0"; sha256="13gzqf3g7vj8cc0xm5902q7lad2way8d0ri1fs01dnv97wmwbxvn"; depends=[caret dplyr FNN rhandsontable shiny]; }; KCSNBShiny = derive2 { name="KCSNBShiny"; version="0.1.0"; sha256="1lv5r9qyvr3dnvcs00jyam0whv64qmv5vphhijlar1xa1g1llwqr"; depends=[caret dplyr e1071 rhandsontable shiny]; }; - KDViz = derive2 { name="KDViz"; version="1.3.1"; sha256="1if4lkq9kvncqw56j7m9kh4piph091zkivvnhxzxj72zq661q5br"; depends=[htmlwidgets igraph mpa networkD3 rvest stringr tm xml2]; }; KENDL = derive2 { name="KENDL"; version="1.1"; sha256="05vsh3x0li964a485q3n19c7fahcprvg1bnrvffagkxf8w1iz153"; depends=[]; }; KERE = derive2 { name="KERE"; version="1.0.0"; sha256="1b16cb3ihcsp9jffmd45sd7ia4pibikmj62ad344wmq22q4fpliy"; depends=[]; }; - KFAS = derive2 { name="KFAS"; version="1.4.1"; sha256="0arsxak3j8xa6w3rqp8z2bh0vrp1yh6v6hdqjl0j6d0db7960ps8"; depends=[]; }; + KFAS = derive2 { name="KFAS"; version="1.4.4"; sha256="1ivfss2wd3wxaryym64r5pv51bwhmv5342dsw65ykk3q9kdmpwvy"; depends=[]; }; KFKSDS = derive2 { name="KFKSDS"; version="1.6"; sha256="1g11f936p554bfxlm4slxhfxki5vqkks1mrbqw4w83v2rcb50f8d"; depends=[]; }; + KFPCA = derive2 { name="KFPCA"; version="1.0"; sha256="1v76rgmg2ww5784jpcd7mg68n1r0vczrisfw1c59cpnmgr365hsy"; depends=[fda fdapace kader pracma]; }; KGode = derive2 { name="KGode"; version="1.0.3"; sha256="0r5664vwq3nsjg08xxsx3lrvc4z2758fc013j8djwz5ydaas7xxs"; depends=[mvtnorm pracma pspline R6]; }; KMDA = derive2 { name="KMDA"; version="1.0"; sha256="0x4kjjdd59wvgg699vrj99wqg3s1qbkbskis1c34xv9b8bzcv94j"; depends=[]; }; KMsurv = derive2 { name="KMsurv"; version="0.1-5"; sha256="0hi5vvk584rl70gbrr75w9hc775xmbxnaig0dd6hlpi4071pnqjm"; depends=[]; }; - KMunicate = derive2 { name="KMunicate"; version="0.2.0"; sha256="1ji1db4h8mxgs37swr05l74l0yl06jfizdhfmmznbac4p1fx3d6c"; depends=[checkmate cowplot ggplot2 pammtools survival tidyr]; }; + KMunicate = derive2 { name="KMunicate"; version="0.2.1"; sha256="19bsnixy59jqpj414827l2r65jimf0swxg36bi90s3pr4mvf7snq"; depends=[checkmate cowplot ggplot2 pammtools survival tidyr]; }; KNNShiny = derive2 { name="KNNShiny"; version="0.1.0"; sha256="16zm8bhdivaap3mvhdx2qn1b1j2iqyarclb0y2qd1n4viwcfm9c1"; depends=[caret dplyr e1071 FNN psycho rhandsontable rmarkdown shiny]; }; KOBT = derive2 { name="KOBT"; version="0.1.0"; sha256="0dw6s68x95d4z5a6p8bs1368jcxv5jx0wd87js28i2qm3q57ss71"; depends=[glmnet knockoff MASS Rdpack spcov xgboost]; }; + KODAMA = derive2 { name="KODAMA"; version="1.6"; sha256="0yhck798l5mqlxgs0jnhmmhr88jw8vay84l0p3304v9s0pbl4kih"; depends=[Rcpp RcppArmadillo]; }; KOGMWU = derive2 { name="KOGMWU"; version="1.2"; sha256="1vz0099gp1r10n7w4p480l8rswdw100sns196d9xin2ibmmd2fx9"; depends=[pheatmap]; }; KONPsurv = derive2 { name="KONPsurv"; version="1.0.3"; sha256="1qijx7b6idjy23kqb5l58l6nc6dh35vrkxv370qpj3y2gvvn9d6x"; depends=[Rcpp survival]; }; + KPC = derive2 { name="KPC"; version="0.1.0"; sha256="1kgrkhhvjkhirp04fgf36x5v5f7ba2yczj11fdk3l12k5k0dx621"; depends=[data_table emstreeR gmp kernlab proxy RANN]; }; + KRIS = derive2 { name="KRIS"; version="1.1.6"; sha256="1alr1va8xi4840ki1r48yf441vyn81lhdakcm7w3wxzlx5mbkkp7"; depends=[rARPACK]; }; KRLS = derive2 { name="KRLS"; version="1.0-0"; sha256="1zyf3smfzfm3n43i35rlj1w6vcip2hxkvk4f8lp77xbsry0gmwjw"; depends=[]; }; KRMM = derive2 { name="KRMM"; version="1.0"; sha256="0wxzhrrc4lx20nxjny7rcfw3bya7drn88zbrlzx9f531298xwbrk"; depends=[cvTools kernlab MASS robustbase]; }; - KSD = derive2 { name="KSD"; version="1.0.0"; sha256="0wqmbr51yv7f87pnhph2nrj9y2d5jql2agizcaq6lax23lj6xfb7"; depends=[pryr]; }; + KSD = derive2 { name="KSD"; version="1.0.1"; sha256="1g7fkk399mgnz0h4nhbxf295d3ph9ssv345c26j6sanqbbd9d7g3"; depends=[pryr]; }; KSEAapp = derive2 { name="KSEAapp"; version="0.99.0"; sha256="1gfgpa2d32y6bzvf4ww70sm7niq34sqmyrhi0phlqxshqq9xviqc"; depends=[gplots]; }; KSPM = derive2 { name="KSPM"; version="0.2.1"; sha256="13fq0d016z6880rr93y918l27fsxd5dxc6gbdnkma5sgsjni5cxh"; depends=[CompQuadForm DEoptim expm]; }; KScorrect = derive2 { name="KScorrect"; version="1.4.0"; sha256="1khvwc610yp3fd4fn0wcgqpzxg9g7sicjjmwvfcahs8qxn3m5vfa"; depends=[doParallel foreach iterators MASS mclust]; }; @@ -2238,18 +2302,19 @@ in with self; { KTensorGraphs = derive2 { name="KTensorGraphs"; version="1.1"; sha256="1szl66ix6c6vb0zzyp404psglx3lk125903zc4za0qfzcic7a9p6"; depends=[]; }; KappaGUI = derive2 { name="KappaGUI"; version="2.0.2"; sha256="0vklny804xpd9r60j4a01j2gak8jizwjw0abf7yvbcalv3zbpb3k"; depends=[irr shiny]; }; KappaV = derive2 { name="KappaV"; version="0.3"; sha256="13mmfb8ijpgvzfj20andqb662950lp9g25k5b26r5ba65p7nhva7"; depends=[maptools PresenceAbsence rgeos sp]; }; - KarsTS = derive2 { name="KarsTS"; version="2.4"; sha256="1jd4303xipf7b8bfqvz6xfw0wc2zk61n1926x5wf2ik82l507mzx"; depends=[circular forecast infotheo mgcv missForest MVN nonlinearTseries plot3D rgl stinepack stlplus tcltk2 tseries tseriesChaos zoo]; }; + KarsTS = derive2 { name="KarsTS"; version="2.4.1"; sha256="1km8321a8vzff26g3x2hvdv5ciyk3fdpcn7g1xqbsx96fzxyd22n"; depends=[circular forecast infotheo mgcv missForest MVN nonlinearTseries plot3D rgl stinepack stlplus tcltk2 tseries tseriesChaos zoo]; }; KbMvtSkew = derive2 { name="KbMvtSkew"; version="1.0.2"; sha256="14g27a0dkj4gpf5l2k96fd3aa21fz8b85lf5a1jxj0qgjmr4kib0"; depends=[]; }; KenSyn = derive2 { name="KenSyn"; version="0.3"; sha256="0s8sq3caxn4swac81196dp52r9lbmxb3ni45yaxh53f5g34slsi8"; depends=[lme4 metafor nlme]; }; Kendall = derive2 { name="Kendall"; version="2.2"; sha256="0z2yr3x2nvdm81w2imb61hxwcbmg14kfb2bxgh3wmkmv3wfjwkwn"; depends=[boot]; }; - KernSmooth = derive2 { name="KernSmooth"; version="2.23-18"; sha256="14640ddvxmczd5xjg1xsd51gll2glfg946vks8wmac6jb8680d43"; depends=[]; }; + KernSmooth = derive2 { name="KernSmooth"; version="2.23-20"; sha256="0fgclmzk3ksjsh3j47jqzm3jhqrwn12rkp7f84yr6wr43q2pbsr0"; depends=[]; }; KernSmoothIRT = derive2 { name="KernSmoothIRT"; version="6.4"; sha256="0qqlmcd04m89pmhrbmxxx4lzzb6sksgrm0j8x7fs5r0sxdqy6rcp"; depends=[plotrix Rcpp rgl]; }; - KernelKnn = derive2 { name="KernelKnn"; version="1.1.0"; sha256="1w8k4b2q5bh0kx72ixrdb43aificl991j1akh00xn1zx3gbrjb0p"; depends=[Rcpp RcppArmadillo]; }; + KernelICA = derive2 { name="KernelICA"; version="0.1.0"; sha256="1yq7w24qq23c81a9y0jn36iw7zjbxsj3b3p1rq6yl0lanzda9bsr"; depends=[ICtest inline JADE ManifoldOptim Rcpp RcppArmadillo RcppEigen]; }; + KernelKnn = derive2 { name="KernelKnn"; version="1.1.2"; sha256="16gnfp117zl3npwgra09c15amclzbhdb6wbrlgard7ii3n7249c2"; depends=[Rcpp RcppArmadillo]; }; Kernelheaping = derive2 { name="Kernelheaping"; version="2.2.2"; sha256="1aq1yhbs07wl5rjz4v5b8k8brap4p25f76qwr5cif655fxdzxc20"; depends=[fastmatch ks magrittr MASS mvtnorm plyr sp sparr]; }; Keyboard = derive2 { name="Keyboard"; version="0.1.0"; sha256="12i9zfpbh2297j78yrz6nnbmj926n3xdkbzmy1p9z7g9bi4cqrp1"; depends=[Iso Rcpp]; }; KnapsackSampling = derive2 { name="KnapsackSampling"; version="0.1.0"; sha256="17yzmd11k1n5iy54vbcvpzvkm8ypbl6n1kfi931wwrrcq9y7hg22"; depends=[lpSolve]; }; KneeArrower = derive2 { name="KneeArrower"; version="1.0.0"; sha256="1blmim4l7375psa9c3wbpksywj5nfbawly4001n6311wcv4dybl5"; depends=[signal]; }; - KnockoffScreen = derive2 { name="KnockoffScreen"; version="0.1.0"; sha256="0z0gzss6p3p9ilcg6jj4nqkb9h3lqc679x1q2vnmyiv6zl9cdrbm"; depends=[CompQuadForm data_table Matrix seqminer SPAtest]; }; + KnockoffScreen = derive2 { name="KnockoffScreen"; version="0.2.0"; sha256="1gc47ahvw9sdjbaxg3xl8r6pw9mkn85wdy6gwlksscnl49krrikg"; depends=[CompQuadForm data_table Matrix seqminer SPAtest]; }; Knoema = derive2 { name="Knoema"; version="0.1.16"; sha256="0v6w8rrw8nd4l1by5w9xd4hbxp55cma89kljha47ykvmnflsrjsc"; depends=[base64enc digest httr jsonlite lubridate xts zoo]; }; KnowBR = derive2 { name="KnowBR"; version="2.0"; sha256="0i934gff8ldg0lm5cfcf3ip7abnparaaviq8avs7cbnacs6nw8i1"; depends=[fossil mgcv plotrix sp vegan]; }; KnowGRRF = derive2 { name="KnowGRRF"; version="1.0"; sha256="0nk0baibd184rsg23jx1wg4c2fcaqf8ww7822xrs3w5ym6vwd0rs"; depends=[MASS PRROC randomForest RRF]; }; @@ -2257,16 +2322,17 @@ in with self; { Kpart = derive2 { name="Kpart"; version="1.2.2"; sha256="02df0pr8a0gm8558gbw9svxf5sybmg27grymy71ar9hjnhw5xlf2"; depends=[leaps]; }; KraljicMatrix = derive2 { name="KraljicMatrix"; version="0.2.1"; sha256="0yzilmiiyzd2x3v0cnjphf0wdwiblh37kgrvmfrdy49qly48pvi2"; depends=[dplyr ggplot2 magrittr tibble]; }; KrigInv = derive2 { name="KrigInv"; version="1.4.1"; sha256="0x12xff7lgr1v2243shfz9a8r02qs56p7i0b8j2s6bmrzj1abrwb"; depends=[anMC DiceKriging mvtnorm pbivnorm randtoolbox rgenoud]; }; - L0Learn = derive2 { name="L0Learn"; version="1.2.0"; sha256="17k006nxn9n66nh6nrnhv24p150s7icbhzsaimjidj7hx2c24lms"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2]; }; + L0Learn = derive2 { name="L0Learn"; version="2.0.3"; sha256="1lfbggh2bal8a6krg262v2pd90cd49aaxmz7crcdws4mx82srzmk"; depends=[ggplot2 MASS Matrix Rcpp RcppArmadillo reshape2]; }; L1mstate = derive2 { name="L1mstate"; version="1.0"; sha256="04gw078zyzpmnrxibqz27gf4dgyhhcn6lg15w10c6la079vfixx2"; depends=[colorspace MASS Matrix mstate Rcpp RcppEigen]; }; L1pack = derive2 { name="L1pack"; version="0.38.196"; sha256="1cayk11wp6f2vpyz14j7my8wpd8hny2mxpjsdsw4wlz0mmwml70l"; depends=[fastmatrix]; }; L2DensityGoFtest = derive2 { name="L2DensityGoFtest"; version="0.1.0"; sha256="0yhcj58inmj3qafvvpghs1qi8h5f14jki4qxy28jc7g8ciqxcw60"; depends=[fGarch kedd nor1mix]; }; + LA = derive2 { name="LA"; version="0.1.1"; sha256="0qn0654nyd8i9rgcsiy79q91jc6f6bwpzxw51c024ppczsv2j9wv"; depends=[LHD]; }; LAGOSNE = derive2 { name="LAGOSNE"; version="2.0.2"; sha256="0fhy590mnkypknxk34c7vrhwrgsjrkf1f0yvfbjy1kvzvla0hjkl"; depends=[curl dplyr lazyeval magrittr memoise progress purrr qs rappdirs rlang sf stringr tibble tidyr]; }; LAM = derive2 { name="LAM"; version="0.5-15"; sha256="18p8w2n2k4788vpxhdxnmcafwj7a5bvihk530fiynkra3xrn1cr4"; depends=[CDM Rcpp RcppArmadillo sirt]; }; LANDD = derive2 { name="LANDD"; version="1.1.0"; sha256="13szkww9nw8zywfrqd8mwgj9csgragm0bx8ia52rcpakpc3hv3hx"; depends=[BH doParallel fdrtool foreach GGally ggplot2 GOSemSim GOstats igraph intergraph Matrix modeest mvtnorm pROC Rcpp]; }; LARF = derive2 { name="LARF"; version="1.4"; sha256="1sqib7smgjacn07ishwls1nlbvcb6fpp1vhrjwf9g4xf9jk30i8h"; depends=[Formula]; }; LARisk = derive2 { name="LARisk"; version="0.1.0"; sha256="05pszgm53dndq114qqb3kcddbvc16a9mgalxjsyh56aa2a4wh7q6"; depends=[Rcpp]; }; - LAWBL = derive2 { name="LAWBL"; version="1.3.0"; sha256="0ixxppxg9kaqk3h0labiq0z0m8x4gzvyh41z4g1ni33br97vdq76"; depends=[coda MASS]; }; + LAWBL = derive2 { name="LAWBL"; version="1.4.0"; sha256="13drqwyg6avmsn3s2d521x1cvlqg85qv999lwnvnyszvz8grahcr"; depends=[coda MASS]; }; LBSPR = derive2 { name="LBSPR"; version="0.1.5"; sha256="0bkq7lj45c5inm4klwxkwv1y39rkhwis53d1qsr908k5xmkbgg0i"; depends=[dplyr ggplot2 gridExtra plotrix RColorBrewer Rcpp shiny tidyr]; }; LCA = derive2 { name="LCA"; version="0.1.1"; sha256="014kih33y8b9nls0pcigw68jbz7vgnq8w1xbwm2d37g1m5y6xlyw"; depends=[]; }; LCAextend = derive2 { name="LCAextend"; version="1.3"; sha256="1l75y3vkbsmsm3pjd5pwy0hlv6gz5ryxs4pkx9aiyhxz2y9wnhpb"; depends=[boot kinship2 mvtnorm rms]; }; @@ -2275,6 +2341,7 @@ in with self; { LCFdata = derive2 { name="LCFdata"; version="2.0"; sha256="1x3vbr6hdviqvd6dxn1kb449g0q5zkfmjsmr5nxd2g82p69lv3xm"; depends=[]; }; LCMCR = derive2 { name="LCMCR"; version="0.4.11"; sha256="11vcqjjlcps3nqfrmncfqdadhrwk7fvrnx6xqwnc6l12hr98hic0"; depends=[]; }; LCox = derive2 { name="LCox"; version="0.1.0"; sha256="1cqkqmi6bkd41xxwqqzpdiwdv8m5nrqz3f6cajnnbmgfcjawmrzq"; depends=[fdapace survival]; }; + LDAShiny = derive2 { name="LDAShiny"; version="0.9.3"; sha256="0iql2fcg7fkyggdwmb6mhn54vhki6v206mkc5km41fjiqss2b4ni"; depends=[beepr broom chinese_misc dplyr DT highcharter htmlwidgets ldatuning plotly purrr quanteda shiny shinyalert shinyBS shinycssloaders shinydashboard shinyjs shinyWidgets SnowballC stringr textmineR tidyr tidytext tm topicmodels]; }; LDATS = derive2 { name="LDATS"; version="0.2.7"; sha256="0im5lvhfbxvrkz9yvfg5xibzdlss869rdz5mixr4ric9lj0ixx0g"; depends=[coda digest extraDistr lubridate magrittr memoise mvtnorm nnet progress topicmodels viridis]; }; LDAvis = derive2 { name="LDAvis"; version="0.3.2"; sha256="1y9wd379rfv3rd3f65ll21nvh6i8yafvv11f8gw8nn06194dgfzg"; depends=[proxy RJSONIO]; }; LDNN = derive2 { name="LDNN"; version="1.10"; sha256="092mnjdmc0l471vd8nym09r9sfx1scp4x6nh22mj6413vaicagq0"; depends=[devtools keras reticulate tensorflow]; }; @@ -2283,8 +2350,7 @@ in with self; { LDRTools = derive2 { name="LDRTools"; version="0.2-1"; sha256="05srfyplsypi3whfa71lx7pnad23irpf0p7rxmrpv28jgdmrz6wf"; depends=[]; }; LDcorSV = derive2 { name="LDcorSV"; version="1.3.3"; sha256="0wr8i9q9p48vpcia8v3rd8bb2pfijr9r6kg9x26k4wncpg7n83cp"; depends=[]; }; LDheatmap = derive2 { name="LDheatmap"; version="1.0-4"; sha256="1jp578cf29qcgx95w10lpymlwx2pgjsf0nypwkl9b8g635gkisq7"; depends=[genetics Rcpp snpStats]; }; - LDlinkR = derive2 { name="LDlinkR"; version="1.0.2"; sha256="0143g41hcljqsfngly56g47pc2pj5xc3myyqia1akxrlwpzdlh7h"; depends=[httr]; }; - LDtests = derive2 { name="LDtests"; version="1.0"; sha256="1jwqr7zlp9hv7vw8xp80xvrwbdv796wjgr914v393wfa07j5wbd1"; depends=[]; }; + LDlinkR = derive2 { name="LDlinkR"; version="1.1.2"; sha256="1cfavm4sazskrrb7kfrw0ni8ls8cdqxdwxyjhmvxf1ln470bc8zg"; depends=[httr]; }; LEANR = derive2 { name="LEANR"; version="1.4.9"; sha256="053xy13ys5hibafdnbkwqdk36hw7dhanp4frfacpfpn5f9nfh95r"; depends=[foreach igraph]; }; LEAP = derive2 { name="LEAP"; version="0.2"; sha256="1yrhanxvr7krvllqzv17qkc4wvmd7mgl57am8sn53773dbfipfc4"; depends=[]; }; LEAPFrOG = derive2 { name="LEAPFrOG"; version="1.0.7"; sha256="0z9ahkk4qzc45h1r806frv9cd84vvshvn5mr84gx7qdxljfkfq6h"; depends=[alabama MASS]; }; @@ -2294,7 +2360,7 @@ in with self; { LFDREmpiricalBayes = derive2 { name="LFDREmpiricalBayes"; version="1.0"; sha256="1imw3djmbpdyplv9dmdzzirp9imk88j0kcxcyfh8yr9ywgd77x6b"; depends=[matrixStats R6]; }; LGEWIS = derive2 { name="LGEWIS"; version="1.1"; sha256="1i52vp0ghjzmyh4r8h6jpyij7x4skw99xvw017b56m8fg64zy70r"; depends=[CompQuadForm geeM mvtnorm SKAT]; }; LGRF = derive2 { name="LGRF"; version="1.0"; sha256="1kdx6y55aa9n6v43zfz6jk8amvvxbx79sqm1jx4ihgkpgcdglan7"; depends=[CompQuadForm geepack SKAT]; }; - LHD = derive2 { name="LHD"; version="1.3.1"; sha256="0y8z829s6l4hml4j0cdd5sh0pax1g8vvnphmvnyf506i8z72k141"; depends=[numbers]; }; + LHD = derive2 { name="LHD"; version="1.3.2"; sha256="11wxsfcgxb5jfxgpf4aw465rn35qq2wdjmh7pirxjc0z6fklrzyp"; depends=[numbers]; }; LICORS = derive2 { name="LICORS"; version="0.2.0"; sha256="0p9y21k1mj1v397jpb5g6jiw7rpzbyfwr4kv2rp3lyxyasy2ykf0"; depends=[fields FNN locfit Matrix mvtnorm RColorBrewer zoo]; }; LIHKGr = derive2 { name="LIHKGr"; version="0.1.0"; sha256="16yyalsdbaxncgfabsz2q2fixzmwyd62gvnvnxazf4vlypp6xlqz"; depends=[dplyr magrittr purrr R6 raster RSelenium rvest tibble xml2]; }; LIHNPSD = derive2 { name="LIHNPSD"; version="0.2.1"; sha256="08ils29vvaq6abkgxbh028vwjw6l6h10cirbnwr65s458zvh4xqv"; depends=[BB Bolstad2 moments optimx Rmpfr sn]; }; @@ -2302,23 +2368,24 @@ in with self; { LINselect = derive2 { name="LINselect"; version="1.1.3"; sha256="1qxqwph5ja2kf1s4ggsv8w6hjgf9mr53a0gahhjix2v78309z42g"; depends=[elasticnet gtools MASS mvtnorm pls randomForest]; }; LIStest = derive2 { name="LIStest"; version="2.1"; sha256="1gk253v3f1jcr4z5ps8nrqf1n7isjhbynxsi9jq729w7h725806a"; depends=[]; }; LLM = derive2 { name="LLM"; version="1.1.0"; sha256="0kxppzaim7cmjawg5rjih4dsz8adq0asairgq3vx5lyjppb2cybx"; depends=[partykit reghelper RWeka scales stringr survey]; }; - LLSR = derive2 { name="LLSR"; version="0.0.2.19"; sha256="19flvf15sn3fd21fymcg7ag1psl265m0i7siw1fqb6j6fvsn0y8v"; depends=[crayon digest dplyr ggplot2 minpack_lm nleqslv rootSolve svDialogs svglite XLConnect]; }; + LLSR = derive2 { name="LLSR"; version="0.0.3.1"; sha256="0nci8p3gw35a3ifwrq7r2jih718p2iwmmh3495qnh0fk304y7kbi"; depends=[crayon digest dplyr ggplot2 minpack_lm nleqslv openxlsx rootSolve svDialogs svglite]; }; LMERConvenienceFunctions = derive2 { name="LMERConvenienceFunctions"; version="3.0"; sha256="0jg889qh5a9wdi01yiw6z7kivs9dzh5dcq39f4zifdpqzglhshzb"; depends=[fields LCFdata lme4 Matrix mgcv]; }; + LMMELSM = derive2 { name="LMMELSM"; version="0.1.0"; sha256="1wrda19629k7fg3rryk9sf16h1w5915cifv7iiqqg64k8w1vwnaj"; depends=[BH Formula loo MASS nlme Rcpp RcppEigen rstan rstantools StanHeaders]; }; LMest = derive2 { name="LMest"; version="3.0.1"; sha256="1ibzk6g2lxxb6cylcfml41dmy1aj4alzi066vsd2v1mfn2b9g1r7"; depends=[diagram Formula MASS mclust mix MultiLCIRT mvtnorm scatterplot3d]; }; LMfilteR = derive2 { name="LMfilteR"; version="0.1.3"; sha256="0c27154jghfl83n3sn26pr8mjcybrq02glvnjcx8hllrmz4gmnmi"; depends=[MASS]; }; LMoFit = derive2 { name="LMoFit"; version="0.1.6"; sha256="10xiaa5h8c0sq9z70yjs29z8jnjyqgybdv33d6s2100h3n46jd31"; depends=[ggplot2 lmom pracma sf]; }; - LN0SCIs = derive2 { name="LN0SCIs"; version="0.1.5"; sha256="09zr6lrvv7lw9qp3vz4n2dv0v3q7wq06wwvwpb2pm0r335bnrf89"; depends=[]; }; - LNIRT = derive2 { name="LNIRT"; version="0.5.0"; sha256="1s7dys4a1gygb9k30l9zby3ls5fwrdy3dvvw4mwdgqsd84zw0rrw"; depends=[MASS]; }; + LNIRT = derive2 { name="LNIRT"; version="0.5.1"; sha256="0w32qvz5mhzg6f8050p57v26amn6d2il2icjfiypf7yi3gsx7w09"; depends=[MASS]; }; LOGAN = derive2 { name="LOGAN"; version="1.0.0"; sha256="00y8kcykw01gv2g20vmpwkc3qqyafwbiw5pa731xlfnh1b8sn0hi"; depends=[dplyr foreign ggplot2 magrittr modules pander psych rlang stringr]; }; LOGICOIL = derive2 { name="LOGICOIL"; version="0.99.0"; sha256="1wgg7kigzzk5ghjn3hkjf1bb8d6mvjfmkwq64phri5jpxd742ps9"; depends=[nnet]; }; LOPART = derive2 { name="LOPART"; version="2020.6.29"; sha256="1zxaag5pj3l9rzxhlrkx8q4adlap7wsdysb4y6ijvsmxvv63j22k"; depends=[data_table Rcpp]; }; LOST = derive2 { name="LOST"; version="2.0.2"; sha256="15ggmvjy2k4j692y9h3anfzmb0hgnx66cbr76grwvcfysdx87ick"; depends=[e1071 gdata geomorph MASS miscTools pcaMethods rgl shapes]; }; LPBkg = derive2 { name="LPBkg"; version="1.2"; sha256="1pgv6cb7m2j7qnrzybnv6x67a3ry8kpvisqj86rvxzclc9q56fdn"; depends=[Hmisc orthopolynom polynom]; }; LPCM = derive2 { name="LPCM"; version="0.46-7"; sha256="1gdinsfn7y3fmv2zr1y8cvy0qwc9zwzf0q1xsnpbmcwljgxb6zdh"; depends=[]; }; + LPDynR = derive2 { name="LPDynR"; version="1.0.1"; sha256="13llv7x6dsyqinjivp40928bnynj3hlldip0xsn37xvmd2li6fjc"; depends=[data_table dplyr magrittr raster rgdal virtualspecies]; }; LPGraph = derive2 { name="LPGraph"; version="2.1"; sha256="1d2kslravi3v9kf6sdabwfpa9s9xxqj3s3d7f7qfcrpfydqixq1q"; depends=[car PMA]; }; LPKsample = derive2 { name="LPKsample"; version="2.1"; sha256="0ifhx8w9f6sacmnck2g7i7r742i8bwwzf0rgajw3klw2wni9ikqx"; depends=[apcluster igraph LPGraph mclust]; }; LPM = derive2 { name="LPM"; version="2.8"; sha256="0a4cf7chjyfwp1s8dfyfgbm2k6nybfmfh4bhz8b8pfj1an68bdr6"; depends=[fracdiff MASS powdist]; }; - LPRelevance = derive2 { name="LPRelevance"; version="3.1"; sha256="1clmr5i95w8mlhibbpg5wvzizqjn5xqdyv38c28djdks18l94mxb"; depends=[BayesGOF Bolstad2 caret ggplot2 glmnet leaps locfdr MASS polynom reshape2]; }; + LPRelevance = derive2 { name="LPRelevance"; version="3.2"; sha256="1bbsva41r8wj0hxar334zvwng0zrs0djq6jn74b345ncwz7ssa3h"; depends=[BayesGOF Bolstad2 caret ggplot2 glmnet leaps locfdr MASS polynom reshape2]; }; LPS = derive2 { name="LPS"; version="1.0.10"; sha256="0gf3jmhfki01z8fm5xdx59gxvhgzqd10x2iwa8369iz9dvwbjk8j"; depends=[]; }; LPStimeSeries = derive2 { name="LPStimeSeries"; version="1.0-5"; sha256="0jmcy8076w4bzfnxaq2m3s60c1wdmywkwzfyrc19wdm8idf666wh"; depends=[RColorBrewer]; }; LPTime = derive2 { name="LPTime"; version="1.0-2"; sha256="08lb6884kj9pg12mzx67fdnqb86x5s6yzb72hh3nrz50awj1f8nn"; depends=[orthopolynom]; }; @@ -2337,22 +2404,27 @@ in with self; { LSD = derive2 { name="LSD"; version="4.1-0"; sha256="17pbdlcbhzf3v7l42mjikln1ga5xjp5r78gjg6a88iahk0lwwlvm"; depends=[]; }; LSDinterface = derive2 { name="LSDinterface"; version="0.4.0"; sha256="0nj4m924cj7x2djalrfyrrmycq2ha6s52m34kjgs7fc9f548lhx0"; depends=[abind]; }; LSDsensitivity = derive2 { name="LSDsensitivity"; version="0.3.2"; sha256="1d7fmmkgppgpkxmkvdnm6r7ncb527hqq47aaa8ck2wsbby6ngygb"; depends=[abind car DiceKriging diptest kSamples lawstat LSDinterface randtoolbox rgenoud sensitivity tseries]; }; + LSMRealOptions = derive2 { name="LSMRealOptions"; version="0.2.0"; sha256="1fvfr1zi73qpgl6hm9mamf3vi99ch10qk6ymxyhi17cmq9lndx52"; depends=[lifecycle]; }; LSMonteCarlo = derive2 { name="LSMonteCarlo"; version="1.0"; sha256="0w5042phkba5dw92r67ppp2s4khjpw5mm701dh9dya9lhj88bz6s"; depends=[fBasics mvtnorm]; }; LSPFP = derive2 { name="LSPFP"; version="1.0.3"; sha256="0wxqpwfyyhk9dig9ji5na7czk19jx14lr9iqb2rllggz4cji9y65"; depends=[bit64 data_table R_utils RCurl seqinr]; }; LSRS = derive2 { name="LSRS"; version="0.2.0"; sha256="0p70v5vbxi1rf055mqgsp8v0lxnaj53bmbghli1764yn3x1k3iw6"; depends=[]; }; - LSX = derive2 { name="LSX"; version="0.9.6"; sha256="1lw0nzjzcazakmmwn83rzclgsmxzlg2nwc9wrrdgvvxwpqfwirhy"; depends=[digest e1071 ggplot2 ggrepel irlba locfit Matrix proxyC quanteda quanteda_textmodels quanteda_textstats reshape2 rsparse RSpectra rsvd stringi]; }; + LST = derive2 { name="LST"; version="0.1.0"; sha256="0fbhfka97lr827a95aixv6vngxbqgv09ply187h212ap9f9w9r0q"; depends=[raster]; }; + LSTS = derive2 { name="LSTS"; version="2.0"; sha256="0qzxlanzzqsif0n6114aqc48jdpnir6v8zzdpf66xw5mkbzl93la"; depends=[ggplot2 patchwork Rdpack scales]; }; + LSX = derive2 { name="LSX"; version="0.9.9"; sha256="0wl4iyyaxi66prva51iryc9iczjlgl3bp4zwdl1nyg01kx7ccn5i"; depends=[digest ggplot2 ggrepel irlba locfit Matrix proxyC quanteda quanteda_textstats reshape2 rsparse RSpectra rsvd stringi]; }; LTPDvar = derive2 { name="LTPDvar"; version="1.2"; sha256="0r9v5g5y9n85jdcvm7zpapm73ism48m3mmybpcmgcs028h2ndv7v"; depends=[]; }; - LTRCforests = derive2 { name="LTRCforests"; version="0.5.2"; sha256="0khmgrlb4g091m1a38hcmc29a2k0wr31f5jx5l4xyy8gcphn1aws"; depends=[ipred partykit prodlim survival]; }; + LTRCforests = derive2 { name="LTRCforests"; version="0.5.5"; sha256="0f0am4wydk4wqiwjzxj2ibdkp5sd47qam4218nn0489knkvas3s7"; depends=[ipred partykit prodlim survival]; }; + LTRCtrees = derive2 { name="LTRCtrees"; version="1.1.1"; sha256="1k16m2fpwn8m4dvm1b82srf3bgkvkwf6kcjpwjgkdappifc7p5m8"; depends=[icenReg Icens interval inum partykit rpart survival]; }; LUCIDus = derive2 { name="LUCIDus"; version="2.1.0"; sha256="133cxmvsxm26jmx65snfswqf69ch10bnfbninkks80h2c1y46kq6"; depends=[boot glasso glmnet lbfgs mclust networkD3 nnet]; }; LVGP = derive2 { name="LVGP"; version="2.1.5"; sha256="03sd777s16nv04ikn9b3rj67ad6n4bwi0rycc7wqdnq0dx6xgniy"; depends=[lhs randtoolbox]; }; LW1949 = derive2 { name="LW1949"; version="1.1.0"; sha256="147ymp7j98ihp1dcz3p5v9ar6h767phjdnga5q5vf1wwa2mxawg7"; depends=[MASS mgcv plotrix]; }; + LWFBrook90R = derive2 { name="LWFBrook90R"; version="0.4.4"; sha256="1jvyfk52gcq3dl8fws652ffwdp0gadrkmcd0n6b0z4r1flrfmaph"; depends=[data_table doFuture foreach future iterators progressr vegperiod]; }; LZeroSpikeInference = derive2 { name="LZeroSpikeInference"; version="1.0.3"; sha256="15x29afaq13iwlj66h97k3kczg9rfgp6i9d76rji58hfgh8i8by6"; depends=[]; }; LaF = derive2 { name="LaF"; version="0.8.4"; sha256="1mj010bl4ql0hm33vl0dd08s9dab11y9fa32nsqs6kbb22gjzk6p"; depends=[Rcpp]; }; LabRS = derive2 { name="LabRS"; version="0.1.0"; sha256="1a9qafimia83qldsif5wfqx273mvqbx22p5i0hg8n4jvj4vzpy2w"; depends=[knitr]; }; LabourMarketAreas = derive2 { name="LabourMarketAreas"; version="3.2.5"; sha256="1fhr677mp7dp18q9yvqycsmyqvqh007y3pc8r500n2axiczjzkqg"; depends=[data_table maptools rgdal rgeos sp spdep]; }; LadR = derive2 { name="LadR"; version="1.0.6"; sha256="14n58y1p14wwxwwrbdqv2kkplma8ficpqx8nd22qp931idijpsji"; depends=[L1pack]; }; LagSequential = derive2 { name="LagSequential"; version="0.1.1"; sha256="1i8h4acfx21r0kxbg4i0k48kvhwy2abri191wp4b22amhz4vqyyd"; depends=[]; }; - Lahman = derive2 { name="Lahman"; version="8.0-0"; sha256="1ha4idp96z9kc2rs0v0iqf7jrg2riccjdqv7rj1vbwz6vjvghbfm"; depends=[dplyr]; }; + Lahman = derive2 { name="Lahman"; version="9.0-0"; sha256="0q6whyqlxdkm17i6hichnd89y3pnjc0xc5aabdanf1i4lpv5vynr"; depends=[dplyr]; }; LakeMetabolizer = derive2 { name="LakeMetabolizer"; version="1.5.0"; sha256="06mvdrdyl0rh9rwd0jxww0sycadcp7cj08hq35q6vyzq0jkxn2xf"; depends=[plyr rLakeAnalyzer]; }; Lambda4 = derive2 { name="Lambda4"; version="3.0"; sha256="04ikkflfr0nmy1gr3gfldlh2v8mpl82k1wwnzp57d2kn75m9vbxz"; depends=[]; }; LambertW = derive2 { name="LambertW"; version="0.6.6"; sha256="02pi98nnscaz044jkh2nrxxdyafdbiy9x0szdfkx894s3bwrf29i"; depends=[ggplot2 lamW MASS RColorBrewer Rcpp reshape2]; }; @@ -2373,11 +2445,12 @@ in with self; { LearnBayes = derive2 { name="LearnBayes"; version="2.15.1"; sha256="0ch54v2zz2yyyk0lvn5rfikdmyz1qh9j1wk3585wl8v58mc0h4cv"; depends=[]; }; LearnClust = derive2 { name="LearnClust"; version="1.1"; sha256="0r2ns1bnsygc6jhr83v1ylfp8fkn3j76233zk5cwsxrq0grx5iqs"; depends=[magick]; }; LearnGeom = derive2 { name="LearnGeom"; version="1.5"; sha256="1pnxiwjkdj78p4hkl1lqagmd937q63yncb45fcra28sa9v9psrcs"; depends=[]; }; - LearningRlab = derive2 { name="LearningRlab"; version="1.3"; sha256="14q8pm51yrfpny2wg5l0x02zibh7qn11zkg51igadq3r6256rfd1"; depends=[crayon magick]; }; - LexisNexisTools = derive2 { name="LexisNexisTools"; version="0.3.3"; sha256="1n4jfdj6b4znwl2vpfc51dy60bksbsniwik8lbdp8z28gm7bdaqv"; depends=[data_table pbapply quanteda quanteda_textstats stringdist stringi tibble]; }; + LearningRlab = derive2 { name="LearningRlab"; version="2.2"; sha256="15lkcrdfdrip1s4rpsn6kshjzsg1hfryh6lgbiqw9x2h0xvfj4da"; depends=[crayon magick]; }; + LearningStats = derive2 { name="LearningStats"; version="0.1.0"; sha256="0xrrb6jws4zj2nwnn30g338bib49b7j26v52ym7p2variwllz068"; depends=[data_table haven readODS readxl]; }; + LexisNexisTools = derive2 { name="LexisNexisTools"; version="0.3.4"; sha256="08v160s9znvv808wcw7319p3dk189bmpypg2wkdzzgkdby4gj3fr"; depends=[data_table pbapply quanteda quanteda_textstats stringdist stringi tibble]; }; LexisPlotR = derive2 { name="LexisPlotR"; version="0.4.0"; sha256="0vlm8wcaj3755cbxrfb7ybla9znd2cbklw2xwyyn6r9i4c9xsfih"; depends=[dplyr ggplot2 tidyr]; }; - LibOPF = derive2 { name="LibOPF"; version="2.6.0"; sha256="0xs4098qd4j1c1vl8x8620xkrfg0iisdzs203djaqb7vqlywmlrn"; depends=[]; }; - LiblineaR = derive2 { name="LiblineaR"; version="2.10-8"; sha256="17ykazac7iv02bxl8xg948vhbdr32icdm1v4bk31zmslp4xsk08g"; depends=[]; }; + LibOPF = derive2 { name="LibOPF"; version="2.6.1"; sha256="01j3jzhi337dmblcm1d79i4cbp159z6k54ybpyzfasjfnp7qizz6"; depends=[]; }; + LiblineaR = derive2 { name="LiblineaR"; version="2.10-12"; sha256="0r5xbklbfgflwlmkh4i0bsdyqcjs1b4lvxr20f4fhajmkj83gqrs"; depends=[]; }; LiblineaR_ACF = derive2 { name="LiblineaR.ACF"; version="1.94-2"; sha256="1ldkb63yhm1ki8i585wp5byx6y0kvclwy3ncacgcdqqk0p41cyi6"; depends=[]; }; Libra = derive2 { name="Libra"; version="1.6"; sha256="0fqmc6fhcmpg9ragk4r4k000wrix9dsd52baz58bp1c80wpvvcf3"; depends=[nnls]; }; LifeHist = derive2 { name="LifeHist"; version="1.0-1"; sha256="0q6l6rva5kxl8yzqa7ni4sdj6p4c61sdsjx8zhckzxb7xlwg2hh0"; depends=[BB Hmisc optimx]; }; @@ -2391,15 +2464,14 @@ in with self; { LindenmayeR = derive2 { name="LindenmayeR"; version="0.1.13"; sha256="01wnvmxdb91ai21h3plgsmy6ds7564s5wq2xyr905ma4a2d8afn5"; depends=[stringr]; }; LindleyPowerSeries = derive2 { name="LindleyPowerSeries"; version="0.1.0"; sha256="1nylsmxx1s6g5dzz69kaqccx3c7hzb49jan22b94816pnzd0k7zp"; depends=[lamW]; }; LindleyR = derive2 { name="LindleyR"; version="1.1.0"; sha256="163i604q683znp6q544hnv4vibygwvsxcfhh8m7iaqr42li3c0ak"; depends=[lamW]; }; + LinearDetect = derive2 { name="LinearDetect"; version="0.1.5"; sha256="0i79k42avcv2nhk9p71a74zv8d204jgqzrs2mni6zp8brhwmxlki"; depends=[factoextra ggplot2 glmnet mvtnorm Rcpp RcppArmadillo sparsevar]; }; LinearRegressionMDE = derive2 { name="LinearRegressionMDE"; version="1.0"; sha256="0nl29l10y5kpds1i4sv7jwizq61fmh5c0zpj8x64qfif4l6y4v0d"; depends=[]; }; LinkageMapView = derive2 { name="LinkageMapView"; version="2.1.2"; sha256="101g4djzkxgxbn87an2vz4s9nwn8gwz7a3p3wg0y4zpdd1pdp716"; depends=[plotrix qtl RColorBrewer]; }; LinkedGASP = derive2 { name="LinkedGASP"; version="1.0"; sha256="1win1yd8y677rmic531dyd29f49p7pr1r3kbjysvv9syi5nkydyj"; depends=[nloptr spBayes]; }; LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.4.0"; sha256="0p6qjnrljxnj3c5nynmx563vcqhxj4jf7czqdg750h38gjy8qzxi"; depends=[crochet]; }; - LipidMS = derive2 { name="LipidMS"; version="1.2.0"; sha256="0fajq38ys1il0x4004xqlx867fsyw0ajbkq4zlkxmqffqbgy0hkq"; depends=[CHNOSZ enviPick LipidMSdata purrr]; }; - LipidMSdata = derive2 { name="LipidMSdata"; version="1.0.0"; sha256="110wvbk59knhsnbv665ji7v0kp4vjn0937k5fg2d724ksy44gxic"; depends=[]; }; + LipidMS = derive2 { name="LipidMS"; version="2.1.3"; sha256="02dkdrm379v9181zw1rpv9jzgayb2kfzgp04yg86f8bjja1nyxff"; depends=[CHNOSZ readMzXmlData scales shiny shinythemes]; }; Lmoments = derive2 { name="Lmoments"; version="1.3-1"; sha256="0pc63bj9a8hzr5m3yssrc4kin39fffwkl8rggs3sagzr12d4i7bw"; depends=[Rcpp RcppArmadillo]; }; LncFinder = derive2 { name="LncFinder"; version="1.1.4"; sha256="04ndxl368glx63pq58mxpyiddj2p84kyi22ylfy1x1x24xmgbdnn"; depends=[caret e1071 seqinr]; }; - LncMod = derive2 { name="LncMod"; version="1.1"; sha256="08001y7s93i3k3478jqfh9zsgpq6ym1xmdmldi7s76zbfr1nknvy"; depends=[pheatmap survival]; }; LncPath = derive2 { name="LncPath"; version="1.1"; sha256="1cpsy681yq96867nr9g75xb0dilb016shqlhxpdn5xyiakrgjl4v"; depends=[igraph]; }; LocFDRPois = derive2 { name="LocFDRPois"; version="1.0.0"; sha256="0zzdp9wgwr6wn3grimghpj4vq34x37c8bqg8acfzlzih8frqal3r"; depends=[dplyr ggplot2]; }; LocalControl = derive2 { name="LocalControl"; version="1.1.2.2"; sha256="1lqcjy5fzz1ndqih5nikidy2zfkn2dn7smbyvdjy47pgcjbzm96a"; depends=[cluster gss lattice Rcpp]; }; @@ -2411,8 +2483,7 @@ in with self; { LogisticDx = derive2 { name="LogisticDx"; version="0.2"; sha256="0ciygvynnyajpn1glxy6mwj9vbl7iv8a8dfsi6wxjxp2rac68rig"; depends=[aod data_table pROC RColorBrewer rms speedglm statmod]; }; LogitNet = derive2 { name="LogitNet"; version="0.1-1"; sha256="08xi5rpbqkc1b3qj24blv3l0r68wcqbsbjcqxiypm75f3c2irc4i"; depends=[]; }; LogrankA = derive2 { name="LogrankA"; version="1.0"; sha256="005zkpzi8h03qvqlpkygrf9xv4q77klafkfxw47x04jvkhklwigb"; depends=[]; }; - LogrankPower = derive2 { name="LogrankPower"; version="1.0.0"; sha256="04vynymfv01q423dd9i1li92rl3lp1af3rzn3z4mamkn51mi6my0"; depends=[survival survminer]; }; - LongCART = derive2 { name="LongCART"; version="2.1"; sha256="0fgk9qx23kzzqc2s4i4zqf4qaj2fxwcsl54n1zx1qvd8mvi8mkzh"; depends=[Formula magic nlme rpart survival survminer]; }; + LongCART = derive2 { name="LongCART"; version="3.0"; sha256="1dzd29148h5l17jgcgf1wsf2sdq0sxac6aykriwx9sdfykyb81fr"; depends=[Formula magic nlme rpart survival survminer]; }; LongMemoryTS = derive2 { name="LongMemoryTS"; version="0.1.0"; sha256="0n378sad8i283vs7q63spdhwpwjly2d5zj15d4v2085j7sc7z8vi"; depends=[fracdiff longmemo mvtnorm partitions Rcpp RcppArmadillo]; }; LongituRF = derive2 { name="LongituRF"; version="0.9"; sha256="0h70g0qhv0rgz40i58ykrcak1wibbvya7fql0v79xkd21217y1av"; depends=[latex2exp mvtnorm randomForest rpart]; }; LoopAnalyst = derive2 { name="LoopAnalyst"; version="1.2-6"; sha256="1gy9v6qiwkwbwp4snif2imf6zn50ffjrig54ln57c5v5pk3phnvv"; depends=[nlme]; }; @@ -2422,34 +2493,38 @@ in with self; { LowRankQP = derive2 { name="LowRankQP"; version="1.0.4"; sha256="0cg8f42s15vphnifw6gnrhxaj6j5hmgbq8xki5mkwjsizd0ch5na"; depends=[]; }; LowWAFOMNX = derive2 { name="LowWAFOMNX"; version="1.1.1"; sha256="0f75qsv6pisgvk39yagzfxscnyfsgh63rmhp4gpybpl0pqmjp48x"; depends=[Rcpp RSQLite]; }; LowWAFOMSobol = derive2 { name="LowWAFOMSobol"; version="1.1.1"; sha256="1ym3i2m1am356di9lcp5nfmxq0np3c4bwsv6bbmf7hg02j7dhwi4"; depends=[Rcpp RSQLite]; }; - Luminescence = derive2 { name="Luminescence"; version="0.9.10"; sha256="0ikiqnvj3ivzx9bmq3bv3k2d6c91v1j1cbrarv1svxv37zdh6qbr"; depends=[bbmle data_table DEoptim httr magrittr matrixStats minpack_lm plotrix raster Rcpp RcppArmadillo readxl shape XML zoo]; }; + Luminescence = derive2 { name="Luminescence"; version="0.9.11"; sha256="1kayb6apvk6jc8sfpmpp3d3alr490304g21yhknyczlr12c0xaff"; depends=[bbmle data_table DEoptim httr lamW magrittr matrixStats minpack_lm plotrix raster Rcpp RcppArmadillo readxl shape XML zoo]; }; M2SMF = derive2 { name="M2SMF"; version="2.0"; sha256="160qjrb3mxybvr4z6zra6rzf6scyrb9mplw36gqlfxj418ndnmm1"; depends=[dplyr MASS]; }; M2SMJF = derive2 { name="M2SMJF"; version="1.0"; sha256="0v4sg5h3h2pjp996jspv206c8cymjpn1fg38ivaw12s7bmx8j409"; depends=[dplyr MASS]; }; M3 = derive2 { name="M3"; version="0.3"; sha256="1l40alk166lshckqp72k5zmsgm7s5mgyzxlp11l64mgncjwkw2r3"; depends=[mapdata maps ncdf4 rgdal]; }; - MABOUST = derive2 { name="MABOUST"; version="1.0.0"; sha256="0wa948r87sycq828kx58b8zilsl8lfcy6w6hh9pisw59s6f0jsj2"; depends=[Rcpp RcppArmadillo]; }; + MABOUST = derive2 { name="MABOUST"; version="1.0.1"; sha256="044k29nibl5zc32zz2696kbhrz5dafgaikgmjqznsq25p48si453"; depends=[Rcpp RcppArmadillo]; }; MADPop = derive2 { name="MADPop"; version="1.1.2"; sha256="0hwnkjrc3w9x3gha0y70fidfc587b6gfdhzwzdzrfvxrhsdy05yd"; depends=[BH Rcpp RcppEigen rstan StanHeaders]; }; + MAFDash = derive2 { name="MAFDash"; version="0.1.0"; sha256="0xk9zbdwmm597jck8v3w76d2s72k6amv8ya94y7jbnik60ndwnda"; depends=[bsplus canvasXpress circlize ComplexHeatmap crosstalk data_table dplyr DT ensurer flexdashboard GenomicRanges ggbeeswarm ggplot2 htmltools IRanges knitr maftools pheatmap plotly RColorBrewer reshape2 rmarkdown TCGAbiolinks]; }; MAGNAMWAR = derive2 { name="MAGNAMWAR"; version="2.0.4"; sha256="1asr18byrgy6bkpxpmnkczgr3dam6ymf30lw6izq112krc891bg4"; depends=[ape coxme doParallel dplyr foreach iterators lme4 multcomp plyr qqman seqinr survival]; }; - MAINT_Data = derive2 { name="MAINT.Data"; version="2.5.0"; sha256="1zjxzl1qnv6drbzqpjdhm6p32cf3xp5yyfmpsm5lksw29bw6x91n"; depends=[GGally ggplot2 MASS mclust miscTools pcaPP Rcpp RcppArmadillo robustbase rrcov sn]; }; + MAINT_Data = derive2 { name="MAINT.Data"; version="2.6.1"; sha256="1ylxyvbi42lp1kv4kg28drw523ld8i2psrzhaq81i30h62349ncg"; depends=[GGally ggplot2 MASS mclust miscTools pcaPP Rcpp RcppArmadillo robustbase rrcov sn withr]; }; MALDIquant = derive2 { name="MALDIquant"; version="1.19.3"; sha256="0b7kdz3x4sdq413h1q09l1qhcvdnnwv6fqsqwllks1cd3xy34c57"; depends=[]; }; MALDIquantForeign = derive2 { name="MALDIquantForeign"; version="0.12"; sha256="1r37x1hnhq246dazc76d17jfjc57khxayswbzvc4md39z8dnbihx"; depends=[base64enc digest MALDIquant readBrukerFlexData readMzXmlData XML]; }; MALDIrppa = derive2 { name="MALDIrppa"; version="1.0.5"; sha256="02wm9i4lhrhxxmhh0a7d1x0np290fbvwr3rb4scp66ix0s1as4fk"; depends=[lattice MALDIquant robustbase signal]; }; MAMS = derive2 { name="MAMS"; version="1.4.1"; sha256="1zc0lnbq4fvsrlyh3a9i010h6gms4872nxv534j5xglq2x2pm7rh"; depends=[mvtnorm]; }; MAMSE = derive2 { name="MAMSE"; version="0.2-1"; sha256="0spi7fqkxjiw5j0nf7ambcr8kpzdhjzh9y3dk23y1mrk2dgc5dkw"; depends=[]; }; MANCIE = derive2 { name="MANCIE"; version="1.4"; sha256="0940xl3z5bca6hcnj2bj341l79wajilxlxzmyz3dlgrz0b3bbdmm"; depends=[]; }; - MANOVA_RM = derive2 { name="MANOVA.RM"; version="0.4.2"; sha256="0kjqswz3drpp12cy3imvkkh37lm70fjh2wg6qxn51ykmz4dkr8sa"; depends=[data_table ellipse magic MASS Matrix multcomp plotrix plyr]; }; + MANOVA_RM = derive2 { name="MANOVA.RM"; version="0.4.3"; sha256="03s96l9fpl7a6hx537cflsjv990qsy3bcy53n3hzvy4llr8qvvmk"; depends=[data_table ellipse magic MASS Matrix multcomp plotrix plyr]; }; MAP = derive2 { name="MAP"; version="0.1.3"; sha256="19d0m30jh50ibbdgvcvq1vsz5i1vf8qvl0d0nbqklvnndch61jhk"; depends=[flexmix Matrix]; }; MAPA = derive2 { name="MAPA"; version="2.0.4"; sha256="02s223s58k2jk49m0xlz3q9m3nip3h4dl4v58j18z2vgi54dwnjr"; depends=[forecast RColorBrewer smooth]; }; MAPITR = derive2 { name="MAPITR"; version="1.1.2"; sha256="0vmsdspja4qfs2z14p835g78zggk8h54v25cn268z1hg2p6zxish"; depends=[CompQuadForm doParallel Rcpp RcppArmadillo]; }; MAPLES = derive2 { name="MAPLES"; version="1.0"; sha256="0hzsh7z1k7qazpxjqbm9842zgdpl51irg7yfd119a7b2sd3a8li9"; depends=[mgcv]; }; + MARSANNhybrid = derive2 { name="MARSANNhybrid"; version="0.1.0"; sha256="1xs0gjdjl9c5i1i8ds9s3sq0764267h6gngkbwimfa8miq287idm"; depends=[earth neuralnet]; }; MARSS = derive2 { name="MARSS"; version="3.11.3"; sha256="03lk838wd88xh4x8ch77z098syn1373nzljckr6pp1jyhxxkvx5z"; depends=[KFAS mvtnorm nlme]; }; + MARSSVRhybrid = derive2 { name="MARSSVRhybrid"; version="0.1.0"; sha256="10b8d75q5hiqf8id1qsvjx379xyx4vphq5r1iwvykjaw4zxbyx65"; depends=[e1071 earth]; }; + MARVEL = derive2 { name="MARVEL"; version="1.1.0"; sha256="0ncyjravigqa97l05z8cqgap67l6rh4n2rh13hnyqvjbd1bmqx1c"; depends=[AnnotationDbi dplyr factoextra FactoMineR fitdistrplus ggplot2 GO_db GOstats kableExtra org_Hs_eg_db plyr stringr]; }; MARX = derive2 { name="MARX"; version="0.2"; sha256="1rc87hz719khl8mclbkfdix499nsc4nyihaaavd73nany7iprm02"; depends=[fBasics matlab metRology stabledist tseries]; }; - MASS = derive2 { name="MASS"; version="7.3-53"; sha256="0f2bwsbqr3nzsqxva051lg8wd068naqif3vc48hac0m3mmq4x0j1"; depends=[]; }; - MASSExtra = derive2 { name="MASSExtra"; version="1.0.2"; sha256="1z2671zidiv0w0w0yi80mh91wgg4gyvcps86kqb2cwghynf5b805"; depends=[MASS]; }; + MASS = derive2 { name="MASS"; version="7.3-54"; sha256="08g8ashbcas3ac98kxvchbwc8da9dq9anpngb4arnw62npawq05q"; depends=[]; }; + MASSExtra = derive2 { name="MASSExtra"; version="1.1.2"; sha256="0jzzm3ahn1iisdp632hcn8lnk6hhh699jqfj6v0164qxd6487xvs"; depends=[demoKde MASS]; }; MASSTIMATE = derive2 { name="MASSTIMATE"; version="2.0-1"; sha256="1dvidwjw4zgflms5njbd9n85g1gbgfg6hk0fb63q5n65iyxxfmyh"; depends=[]; }; MAT = derive2 { name="MAT"; version="2.2"; sha256="093axw2zp4i3f6s9621zwibcxrracp77xrc0q5q0m4yv3m35x908"; depends=[Rcpp RcppArmadillo]; }; - MATA = derive2 { name="MATA"; version="0.4"; sha256="0x155izylzwajlnlbdnawb3b8gwxd1cx03xb1sqi3w2g50bcljbf"; depends=[]; }; + MATA = derive2 { name="MATA"; version="0.7.1"; sha256="0qydfp856qlmiwf3a2vs2dfk203sx8vvzrqn4hga9wi7bxdylk9f"; depends=[]; }; MATTOOLS = derive2 { name="MATTOOLS"; version="1.1"; sha256="1nzrkm3a08rpsd9vplyf33rrkadlrd0ln70k95qxj98ndh2v97px"; depends=[]; }; - MAVE = derive2 { name="MAVE"; version="1.3.10"; sha256="0y5msdrczzr1q38s4zh0l8cwkq3akrdq0c63klldxa9cl4shmhzr"; depends=[mda Rcpp RcppArmadillo]; }; + MAVE = derive2 { name="MAVE"; version="1.3.11"; sha256="01n204bxabbm8pcpayy2s0jvhg73r5cv0026lb3vbk0m40z02kcz"; depends=[mda Rcpp RcppArmadillo]; }; MAVIS = derive2 { name="MAVIS"; version="1.1.3"; sha256="02hi3n2rligmgg9afqwkpdny2kl68simkaqdd6k1swzlrih0fs4s"; depends=[compute_es ggplot2 irr MAc MAd metafor quantreg SCMA SCRT shiny shinyAce shinyBS weightr]; }; MAVTgsa = derive2 { name="MAVTgsa"; version="1.3"; sha256="0rzal9nsi8y873cbf6hrdyzyxnpd4r1yr9fj66cn0s1c8g93ls0y"; depends=[corpcor foreach MASS multcomp randomForest]; }; MAc = derive2 { name="MAc"; version="1.1.1"; sha256="1dawqmziffaz8wgcqzwc0yifdq65abgn24vafkrwa9850048c26f"; depends=[]; }; @@ -2463,25 +2538,26 @@ in with self; { MBHdesign = derive2 { name="MBHdesign"; version="2.1.8"; sha256="0b9bk4qwsymhqylpimsv1vghlwwbnd1jxik927wn2h4ijqq3a9q8"; depends=[class geometry mgcv mvtnorm randtoolbox]; }; MBI = derive2 { name="MBI"; version="1.0"; sha256="1lb0sjwa6x360n9a9pagz6yhxh37gxq1fk0f5c3i2sd56ny9jpns"; depends=[]; }; MBNMAdose = derive2 { name="MBNMAdose"; version="0.3.0"; sha256="12ij19828nd1r0x1vp7clkwr0zfksk3f755xghzylz0ryjjb716d"; depends=[checkmate dplyr formatR igraph magrittr R2jags Rdpack reshape2 rgeos rjags scales utf8]; }; - MBNMAtime = derive2 { name="MBNMAtime"; version="0.1.3"; sha256="1yyynsdgxdw3zfv0byxbjli332wc3bm8pfhrcy4rsvvvhj458vy7"; depends=[checkmate dplyr magrittr R2jags Rdpack reshape2 rjags]; }; + MBNMAtime = derive2 { name="MBNMAtime"; version="0.2.0"; sha256="0fykvfhql8ar96qpzbfiznqbkz8kcgmjhsvg0fzpy4ycx5359m66"; depends=[checkmate dplyr knitr magrittr R2jags Rdpack reshape2 rjags]; }; MBSGS = derive2 { name="MBSGS"; version="1.1.0"; sha256="1h5vhmpgrqza12j7ivhwgd5wyb7kkb8mjbxl5w756vyid8g03flz"; depends=[MASS MCMCpack mgcv mnormt truncnorm]; }; MBSP = derive2 { name="MBSP"; version="1.0"; sha256="0mds6jfqgmnm4saqqqqqfcg8zh4qsvd2503g3ij1sn70f0aakwaj"; depends=[coda GIGrvg MASS Matrix MCMCpack]; }; + MBmca = derive2 { name="MBmca"; version="1.0.1-1"; sha256="01gxb6c50bmxgbqld1mpy8l0h58gahmzfcir1ihgbpnvq6ysx8k7"; depends=[chipPCR robustbase]; }; MC2toPath = derive2 { name="MC2toPath"; version="0.0.16"; sha256="0jdn9wpxavn2wrml907v23mfxr62wwjdh7487ihjj59g434ry7wh"; depends=[RNetCDF]; }; MCAvariants = derive2 { name="MCAvariants"; version="2.5"; sha256="17v554ammsk39i3h8i85m2jl0wf4ra1ag3n9x3mcpqakha0p7852"; depends=[ggplot2 ggrepel gridExtra plotly]; }; MCBackscattering = derive2 { name="MCBackscattering"; version="0.1.1"; sha256="0vvcqjrh8psl480s4q2830rzm2bwy9mmvk9kipp72lzln51qnha6"; depends=[]; }; - MCDA = derive2 { name="MCDA"; version="0.0.20"; sha256="1pzp68dirby5ddwz37kjh9dnmwsbdfi37gfr8pgmngqzgbr9x6dd"; depends=[combinat glpkAPI RColorBrewer Rglpk]; }; + MCDA = derive2 { name="MCDA"; version="0.0.21"; sha256="1y37whbmzzghdav10l4w72sv6dzdxfhij7vkq5217ajkn2cm06mg"; depends=[combinat glpkAPI RColorBrewer Rglpk]; }; MCDM = derive2 { name="MCDM"; version="1.2"; sha256="0r27y9mqvfnv1m0yi2xdyjr4y1s43d5yav960kz2xa732hrrxw01"; depends=[RankAggreg]; }; MCI = derive2 { name="MCI"; version="1.3.3"; sha256="1wn8lcr5sq3697nsmly6syb9jv7p99ks0fy933ff5rx54x3rf9hz"; depends=[]; }; MCL = derive2 { name="MCL"; version="1.0"; sha256="1w36h4vhd525h57pz6ik3abbsrvxnkcqypl2aj1ijb6wm7nfp4ri"; depends=[expm]; }; MCMC_OTU = derive2 { name="MCMC.OTU"; version="1.0.10"; sha256="15k3y4bm4cxjb6r30afpw9gksflsxigzb17zwm1ipygq0d0h0zkg"; depends=[coda ggplot2 MCMCglmm]; }; MCMC_qpcr = derive2 { name="MCMC.qpcr"; version="1.2.4"; sha256="0v0d43wnq3swbrcsbg9qmwkmk4s50grd6cik4ng5baj2i6i4hd2n"; depends=[coda ggplot2 MCMCglmm]; }; MCMC4Extremes = derive2 { name="MCMC4Extremes"; version="1.1"; sha256="06p6xdbja7vrdq4vnhybpkmyf4rkaihcmy9sc81sb0h2wa21vcq0"; depends=[evir]; }; - MCMCglmm = derive2 { name="MCMCglmm"; version="2.29"; sha256="1d37rk10zi2yymsxif9091z9lnav7p4cazjfq29fhj90x8vpifhk"; depends=[ape coda corpcor cubature Matrix tensorA]; }; + MCMCglmm = derive2 { name="MCMCglmm"; version="2.32"; sha256="1czhsgb5pc2xxkkinf03z60c8qfwcn3xqxll4cpjz48g1lg6w5d9"; depends=[ape coda corpcor cubature Matrix tensorA]; }; MCMChybridGP = derive2 { name="MCMChybridGP"; version="5.4"; sha256="19nbch76g7jf53nrb1lyzr3zd0z6rpz2k86mq1r9aidwwxh81g7p"; depends=[MASS]; }; - MCMCpack = derive2 { name="MCMCpack"; version="1.4-9"; sha256="1fskidw7fgy65isqk9msmnfk0ygpb97cla84kgmndxakqy4c2i9c"; depends=[coda lattice MASS mcmc quantreg]; }; + MCMCpack = derive2 { name="MCMCpack"; version="1.5-0"; sha256="1khavqsimiwbfq7gyw5jyj67jxfd579pnc7mngnd655zc8yzspvr"; depends=[coda lattice MASS mcmc quantreg]; }; MCMCprecision = derive2 { name="MCMCprecision"; version="0.4.0"; sha256="0r0qchiv61sk3drrb0rhwsk55gci4w343hd2gsvclrlyb8r9qhaf"; depends=[combinat Matrix Rcpp RcppArmadillo RcppEigen RcppProgress]; }; MCMCtreeR = derive2 { name="MCMCtreeR"; version="1.1"; sha256="00r6f62h7ryil7qxd25icvkqypjjssjsrz4i5sbqsnw5cdy5al8z"; depends=[ape coda sn]; }; - MCMCvis = derive2 { name="MCMCvis"; version="0.14.0"; sha256="0j4a749rc5sj4jd000d28llx7kzn0z1n2p565yvsrj92qnja300p"; depends=[coda overlapping rstan]; }; + MCMCvis = derive2 { name="MCMCvis"; version="0.15.1"; sha256="0zn1vjncw2q8rnkzyb1rp0cc61nqzvrk4pq47wxzcwiczdp2grpx"; depends=[coda overlapping rlang rstan]; }; MCPAN = derive2 { name="MCPAN"; version="1.1-21"; sha256="0q1m0xg8825q9zjwxcz2h2n0dyr21q5bk29qbqpdhirlwm6f1a51"; depends=[magic MCMCpack multcomp mvtnorm plyr]; }; MCPMod = derive2 { name="MCPMod"; version="1.0-10.1"; sha256="0j15dpxy62vwbd6pcsvkbpi1nklh0yjzwf53kcmv4jhj0v6xmpp9"; depends=[lattice mvtnorm]; }; MCPModGeneral = derive2 { name="MCPModGeneral"; version="0.1-1"; sha256="0izhbiivlb818ak49hl1f7li1chlyrxk5f80cmw4zkim3l6ddaxq"; depends=[DoseFinding MASS]; }; @@ -2493,8 +2569,10 @@ in with self; { MChtest = derive2 { name="MChtest"; version="1.0-3"; sha256="1b3p6ry8gkvyphakn3504ibl2x8dbhx95saild0mj0iwm3sjyspf"; depends=[]; }; MConjoint = derive2 { name="MConjoint"; version="0.1"; sha256="02yik28mhvd4rfqwrprdbdjx9c49ds55fh042bsjajs2ip467w5c"; depends=[]; }; MDBED = derive2 { name="MDBED"; version="1.0.0"; sha256="1r3sizb2mqd4pqjy25krwmsjfkr6cl7lkd8db5jn3hgxx3qh6sgc"; depends=[doParallel foreach ggplot2 lattice orthopolynom psych Rdpack]; }; - MDFS = derive2 { name="MDFS"; version="1.0.5"; sha256="17ksjgzi8sxyqczscq1rd6a8zgdd0h9sm3c0ymsf0phr69msvpg0"; depends=[]; }; + MDFS = derive2 { name="MDFS"; version="1.2.0"; sha256="17w243j77l3kcqf4hpzk3mp2csvcs8ax8sj6jm0qrngckl5d123h"; depends=[]; }; + MDMAPR = derive2 { name="MDMAPR"; version="0.2.2"; sha256="0psryv1n3fnsannr7014qwqkg4mr6k44nvzji5bw6647hf0vww3m"; depends=[berryFunctions bslib DBI dplyr DT ggplot2 htmltools htmlwidgets leaflet leaflet_extras plotly reactable readxl RMySQL shiny shinydashboard shinyjs shinyWidgets writexl xfun]; }; MDMR = derive2 { name="MDMR"; version="0.5.1"; sha256="1pv57xl7pjsqxz1j8mnfmjaa36mlr749yb4c44ppdrx6khvw662x"; depends=[car CompQuadForm lme4]; }; + MDOLS = derive2 { name="MDOLS"; version="1.0"; sha256="02fkrv6yn2r0ryphvxhlnv05xxq3j824ijnj75dag3v9kinx1ar2"; depends=[]; }; MDPtoolbox = derive2 { name="MDPtoolbox"; version="4.0.3"; sha256="0aaw787fvcyhw6mbl42icgqfdzvfr618vg179984xqifafr40dyc"; depends=[linprog Matrix]; }; MDSMap = derive2 { name="MDSMap"; version="1.1"; sha256="0knrkfwgl763fwdb3ln3g5y3rarnpqdfgzxf4m045664m7gkipsg"; depends=[princurve reshape rgl smacof]; }; MDSPCAShiny = derive2 { name="MDSPCAShiny"; version="0.1.0"; sha256="0qsjx4v9j5p5a7h1g0xk4j5ib1mdrjsy84bglnjdxr9rpqg2m7n5"; depends=[dplyr MASS psych rmarkdown shiny]; }; @@ -2503,7 +2581,7 @@ in with self; { MDplot = derive2 { name="MDplot"; version="1.0.1"; sha256="1xijh18hrkb807nfkdr7g642aspn5psc8nw29q387jl5hly2w8s9"; depends=[gplots gtools MASS RColorBrewer]; }; MED = derive2 { name="MED"; version="0.1.0"; sha256="0fy0qmxirkdz5kigy2r7l5czjzws0fhjxy13kv1kqh628ldrp109"; depends=[]; }; MEDITS = derive2 { name="MEDITS"; version="0.1.7"; sha256="0n3llnvpxd4bs1vslhmsahvl9vm0pmbmc94gijss16linpskxxkj"; depends=[ggplot2 hms raster rgdal rgeos sp tibble vegan]; }; - MEDseq = derive2 { name="MEDseq"; version="1.2.0"; sha256="12wvqar21b077v5dhyab8prfliild7im2xzfw222jncl228ypgxq"; depends=[cluster matrixStats nnet seriation stringdist TraMineR WeightedCluster]; }; + MEDseq = derive2 { name="MEDseq"; version="1.2.1"; sha256="0m22wr0zjlsflh4xrbimynghy2n6k0x78zii2y72xz87hms04ll6"; depends=[cluster matrixStats nnet seriation stringdist TraMineR WeightedCluster]; }; MEGENA = derive2 { name="MEGENA"; version="1.3.7"; sha256="0cr10pmj1n831scz5kgaq3nkglr3imwgc62cxng2dvdxr9991g21"; depends=[BH cluster doParallel foreach fpc ggplot2 ggraph ggrepel igraph Matrix Rcpp reshape]; }; MEMSS = derive2 { name="MEMSS"; version="0.9-3"; sha256="0fq85jrajfwavq2fvsw2x9hknc57wc253zw2vw970f04khfbragd"; depends=[lme4]; }; MEPDF = derive2 { name="MEPDF"; version="3.0"; sha256="15hbp7g5dsdpvi239jm6jn11fn371ir6la31g0flqkilq6sr1sqd"; depends=[gtools mvtnorm plyr pracma]; }; @@ -2511,20 +2589,20 @@ in with self; { MEclustnet = derive2 { name="MEclustnet"; version="1.2.2"; sha256="0rs58dafxngk2lkq14cy14ayjwgnz1gmi12jmi4z74sdj0b3h0gw"; depends=[e1071 ellipse latentnet MASS mvtnorm nnet vegan]; }; MEtest = derive2 { name="MEtest"; version="1.1"; sha256="0dxm3fs0lqnas70a1ckikvjp2ib9rqsknwcs9n9jfsmm1fqhxdpf"; depends=[statmod]; }; MF = derive2 { name="MF"; version="4.3.2"; sha256="1arnhyqf1cjvngygcpqk2g4d52949rhkjmclbaskyxcrvp62qln0"; depends=[]; }; - MFAg = derive2 { name="MFAg"; version="1.7"; sha256="0cc1p677lsmdyw9x7kzc4prlw70y4rqmygspkvd4r11hrs54m05a"; depends=[]; }; + MFAg = derive2 { name="MFAg"; version="1.8"; sha256="1kkcx6290ffk8g3amakaa5z5hz07z9iiqp2jxvma4pk85w6qay83"; depends=[]; }; MFDFA = derive2 { name="MFDFA"; version="1.1"; sha256="0nr78p6y4jpg1hrl0h7b7hyvwbr61paf85y3f2dx815x5hscmdhy"; depends=[numbers]; }; MFHD = derive2 { name="MFHD"; version="0.0.1"; sha256="0gb8y297y1x03wy46530psmlawyv4z5dydilk36qcmadlk1wx02k"; depends=[deldir depth depthTools fda_usc matrixStats]; }; MFPCA = derive2 { name="MFPCA"; version="1.3-6"; sha256="1xync706kn4l0ky9fbj13f76r34bs95qp32pnsawa3qqsipxi2w3"; depends=[abind foreach funData irlba Matrix mgcv plyr]; }; MFT = derive2 { name="MFT"; version="2.0"; sha256="0n1xws3dw0650037qyqgp600p8cf098qa5hkbncdfdbl0w34qamy"; depends=[]; }; MGBT = derive2 { name="MGBT"; version="1.0.4"; sha256="1x2yqfb5diqkq82j81slh9kxzxgyy67axyqlqjpv237yf8p0djc0"; depends=[]; }; MGDrivE = derive2 { name="MGDrivE"; version="1.6.0"; sha256="0ynn7iwxi5yfpjyrvfr6ym4ns7h8qfy8c10clab7i72pv90jqqlr"; depends=[R6 Rcpp Rdpack]; }; - MGDrivE2 = derive2 { name="MGDrivE2"; version="1.0.1"; sha256="0s4z2czqp3h6kwjiqngw2xdfjg2sf282sdd7nqxy3br9vw6i0682"; depends=[deSolve Matrix]; }; + MGDrivE2 = derive2 { name="MGDrivE2"; version="1.1.0"; sha256="18pkv3gr2c2qi6p8x2d9wx713k1x251s49qaj2airqy84x2zd8dh"; depends=[deSolve Matrix]; }; MGL = derive2 { name="MGL"; version="1.1"; sha256="03q453swnangxyc4nvjhzw2zpcy5vp1wpilap5rwymnf0c0xi4j7"; depends=[]; }; MGLM = derive2 { name="MGLM"; version="0.2.0"; sha256="0yyqm53lvp59zy8lkffw9x3zhqrnh29j5v3yyzk6qrgj2slnc7nk"; depends=[]; }; MGMM = derive2 { name="MGMM"; version="0.3.1"; sha256="1q33p1syvw8q4akl172ndcbl23gw2nfsx40dyafl349h5bqyj6rk"; depends=[cluster mvnfast plyr Rcpp RcppArmadillo]; }; MGMS2 = derive2 { name="MGMS2"; version="1.0.2"; sha256="04f1ng4s163x7gvy1iaf0j8pzs0pm2r2saji0srbp2jyhrj68d7z"; depends=[MALDIquant MALDIquantForeign]; }; MGRASTer = derive2 { name="MGRASTer"; version="0.9"; sha256="0jmf2900r56v60981sabflkhid3yrqd9xd7crb56vgfl1qkva9zp"; depends=[]; }; - MGSDA = derive2 { name="MGSDA"; version="1.4"; sha256="0grwl740yvz2av5nkvmyyrr8ji5f39sjs1c5gxp6lp9p36i2wc32"; depends=[MASS]; }; + MGSDA = derive2 { name="MGSDA"; version="1.6"; sha256="03n7ngfbh87hhgpkjkc1a0zjslr0k9zip1prvbwhyqkfq21zajbr"; depends=[MASS]; }; MHCtools = derive2 { name="MHCtools"; version="1.3.0"; sha256="1vfyq2c2lrx2vsxz969pif38gw0vsh0bixyr3wh1rvswbw9wlj0b"; depends=[]; }; MHMM = derive2 { name="MHMM"; version="1.0.0"; sha256="0d3djaydw0h7x3vlaghrbgmx024rgv36wfsjhlixzzssb2d6lqzi"; depends=[BH ggplot2 gridExtra Rcpp RcppArmadillo reshape2]; }; MHTcop = derive2 { name="MHTcop"; version="0.1.1"; sha256="1mr8y8brsi37b5qx3fqm0bj90dgknzzwhxfmvyd9kxbxh19whgxq"; depends=[copula matrixStats MCMCpack mvtnorm stabledist]; }; @@ -2538,8 +2616,9 @@ in with self; { MIICD = derive2 { name="MIICD"; version="2.4"; sha256="1xlvhyh3gg77cym10i8hrxm8r1jm4plvny2c4izic6w89snplyq6"; depends=[MASS mstate survival]; }; MIIVsem = derive2 { name="MIIVsem"; version="0.5.5"; sha256="0x4dm9l8hn7hahbdkp0i9azqwr94s33wmk32zmmhgaq4f60wlhcw"; depends=[boot car lavaan Matrix numDeriv]; }; MILC = derive2 { name="MILC"; version="1.0"; sha256="14xsiw5al6kixwvf3ph0dlm8s13gsbqvzb92da6ng3x4iiyb1g0w"; depends=[]; }; - MIMSunit = derive2 { name="MIMSunit"; version="0.9.2"; sha256="1dds6vvmqfhjyjiar11jyq406by64rmikgma2rc80xkrhifa94m1"; depends=[caTools dplyr dygraphs ggplot2 lubridate magrittr matlab plyr R_utils RColorBrewer readr shiny signal stringr xts]; }; + MIMSunit = derive2 { name="MIMSunit"; version="0.10.0"; sha256="0yw9rpbbx6x85g4ksp1x233xv311d6ss7rm2as509vkglk1cr7nw"; depends=[caTools dplyr dygraphs ggplot2 lubridate magrittr matlab plyr R_utils RColorBrewer readr shiny signal stringr tibble xts]; }; MIPHENO = derive2 { name="MIPHENO"; version="1.2"; sha256="0hcaq66biv4izszdhqkgxgz91mgkjk1yrwq27fx07a2zmzj44sfv"; depends=[doBy gdata]; }; + MIRES = derive2 { name="MIRES"; version="0.1.0"; sha256="17k6f73qx85klhhn247nr6h7sinpabq9crlc5ag7qm6z7k6mr370"; depends=[BH cubature dirichletprocess Formula HDInterval logspline mvtnorm nlme pracma Rcpp RcppEigen rstan rstantools StanHeaders truncnorm]; }; MIXFIM = derive2 { name="MIXFIM"; version="1.1"; sha256="1xx25b7hfyzynfh3vsqrkriqnqnn173gn8j1vwqmc434c1vy4nx2"; depends=[ggplot2 mvtnorm rstan]; }; MImix = derive2 { name="MImix"; version="1.0"; sha256="033gxr0z2xba0pgckiigblb1xa94wrfmpgv3j122cdynjch44j4r"; depends=[]; }; MInt = derive2 { name="MInt"; version="1.0.1"; sha256="1nk02baainxk7z083yyajxrnadg2y1dnhr51fianibvph1pjjkl6"; depends=[glasso MASS testthat trust]; }; @@ -2550,7 +2629,7 @@ in with self; { MKmisc = derive2 { name="MKmisc"; version="1.6"; sha256="0x518icdgq4mrc6qm1flb5lpr9y7j9znh0ah3gw2xsbjiplqd323"; depends=[ggplot2 limma RColorBrewer robustbase scales]; }; MKomics = derive2 { name="MKomics"; version="0.5"; sha256="0mr0y1ai3jf3jj4dqvs6xv3clgli7d7lzqk8ya6zah388rqmkg9s"; depends=[limma RColorBrewer robustbase]; }; MKpower = derive2 { name="MKpower"; version="0.5"; sha256="1yr9yk7x8da2b8hj71v4f5c2nikljbr6ayqp004whdi2bh67v95n"; depends=[coin ggplot2 matrixTests MKdescr MKinfer qqplotr]; }; - ML_MSBD = derive2 { name="ML.MSBD"; version="1.2.0"; sha256="1dxvvyha984j3h170s2brhbf4lm53f16f12lhnqf3sl4sc0f4xv8"; depends=[ape foreach]; }; + ML_MSBD = derive2 { name="ML.MSBD"; version="1.2.1"; sha256="1cpwq0vilbyz837d8k8pjipw3cwdsggbs88nwp827s4w2f1m7pap"; depends=[ape foreach]; }; ML2Pvae = derive2 { name="ML2Pvae"; version="1.0.0"; sha256="0laazb78qz6348kdyivb062nrmiz45imr3l3ck338a230avy4w4d"; depends=[keras reticulate tensorflow tfprobability]; }; MLCIRTwithin = derive2 { name="MLCIRTwithin"; version="2.1.1"; sha256="1x0xmka7kkbjnh3yv4zxxyl17cpmf0rb9hxmdl1srb6ijld4np1b"; depends=[limSolve MASS MultiLCIRT]; }; MLCM = derive2 { name="MLCM"; version="0.4.2"; sha256="14sd9ybwyilympnbyaqmwdrbip4vyn1p93rh9mlxls3bmk6nc4hv"; depends=[]; }; @@ -2568,14 +2647,17 @@ in with self; { MLPUGS = derive2 { name="MLPUGS"; version="0.2.0"; sha256="1yda37073g640g1qrkjrwa8hbyq6bjlcw3wpznx0bk5h0639bc0s"; depends=[]; }; MLRShiny = derive2 { name="MLRShiny"; version="0.1.0"; sha256="06zcyz8l4754sjbcql3jd3nq1d2lgj92p5h2bh708z52mww71isw"; depends=[corrgram dplyr forecast psych QuantPsyc shiny shinyAce]; }; MLRShiny2 = derive2 { name="MLRShiny2"; version="0.1.0"; sha256="1ygamp0ldz1i0w2xyi205rpd1gd5asw61l36z06j41ghdyiz1lww"; depends=[corrgram dplyr forecast psych QuantPsyc shiny shinyAce]; }; + MLVSBM = derive2 { name="MLVSBM"; version="0.2.1"; sha256="10yw8w4ahxbzc58zkknjpy6v11pfyjr9yhzlri1zw77ivf4krbra"; depends=[ape blockmodels magrittr R6]; }; MLZ = derive2 { name="MLZ"; version="0.1.3"; sha256="0yj9241k3yk8qy6w2q26gwbj9b9qynv3s3jpyfxixvkc9kji3wc2"; depends=[dplyr ggplot2 gplots RcppEigen reshape2 TMB]; }; MLeval = derive2 { name="MLeval"; version="0.3"; sha256="1g2w5lrr7199n4zyaalbp9xdgl858hdg1pqr3rpd7v5fmamawc69"; depends=[ggplot2]; }; MLmetrics = derive2 { name="MLmetrics"; version="1.1.1"; sha256="061129b36h7xqw4zsznik694n8yy9qq6aaqfhdxkhdv8n5v1nzvp"; depends=[ROCR]; }; + MLpreemption = derive2 { name="MLpreemption"; version="1.0.1"; sha256="0fvrl7ahaiv93sq637yhf18j8bf3w28f0l4b8sjs2ssc5pbg1448"; depends=[]; }; MM = derive2 { name="MM"; version="1.6-5"; sha256="0vi6wp6p48jjfmnspdsnmw0yqz39sjk6nrkxdw7kan5h17h4rwd7"; depends=[abind emulator magic Oarray partitions]; }; MM2S = derive2 { name="MM2S"; version="1.0.6"; sha256="1knr15vjc81cp7j67nc2gwkgds6ar3ribi1h0ihg0ch6rfz5c5zs"; depends=[GSVA kknn lattice pheatmap]; }; MM2Sdata = derive2 { name="MM2Sdata"; version="1.0.3"; sha256="0hlm6jp8jq38vkszwdgpf30w11l1fhpblg26zv05j50a6whpmhqd"; depends=[Biobase]; }; MM4LMM = derive2 { name="MM4LMM"; version="2.0.2"; sha256="0zcaqxz1yxv2lkp39ly4jkl9wk94k7md5ks5wjk9l1qk7k5q7yx9"; depends=[MASS Matrix Rcpp RcppEigen]; }; MMAC = derive2 { name="MMAC"; version="0.1.2"; sha256="1xwz48iizf0lvmhc7krsraabc49ky85qvgr23w4ip6jzfv4sn1jr"; depends=[]; }; + MMD = derive2 { name="MMD"; version="1.0.0"; sha256="0cz009ndsvlk4hvvyl49l0d68z3b7z083r26z52lizbmw7zaxvbv"; depends=[bigmemory e1071 plyr]; }; MMDCopula = derive2 { name="MMDCopula"; version="0.1.0"; sha256="0xldnz4393hqkidfy03mdb8ia3nycdj5q3s37j8q05m0pn4pjk1z"; depends=[cubature pcaPP randtoolbox VineCopula]; }; MMDai = derive2 { name="MMDai"; version="2.0.0"; sha256="0b9lksql266sqhxy4k3chz2pcaabgijkp7g0v4pm7ci5v50d4vag"; depends=[]; }; MMDvariance = derive2 { name="MMDvariance"; version="0.0.9"; sha256="1yiqabifym7gdknqrhfnql6qc8p163npzrrckbyqjry3yvkqr5wi"; depends=[Biobase lawstat MASS]; }; @@ -2585,8 +2667,9 @@ in with self; { MMVBVS = derive2 { name="MMVBVS"; version="0.8.0"; sha256="08nkhrf62yywpm0nw22pqzlcm72sf4zq44640a7pf57bbzm38ccy"; depends=[ggplot2 Rcpp RcppArmadillo reshape reshape2 rlang]; }; MMWRweek = derive2 { name="MMWRweek"; version="0.1.3"; sha256="1l1ks44v52iggw9nhs56lfj6804yab5b17k8fzrc6h1kvj3vda0s"; depends=[]; }; MMeM = derive2 { name="MMeM"; version="0.1.0"; sha256="1b0wdcyqnliw85il5vnwy9l4x1z42kirbg872hl47plwfrp9gahc"; depends=[jointDiag lme4 MASS Matrix matrixcalc psych stringr]; }; + MNB = derive2 { name="MNB"; version="1.0.0"; sha256="0qb682mfiprnrqfgyzwl564krhh6lms15gr4m44kkk3f5cdqxrmf"; depends=[flexsurv numDeriv]; }; MNLR = derive2 { name="MNLR"; version="0.1.0"; sha256="0q80232ndp7pkklzqdbga1vf51dmsxaivm4ia4wah32rc2c87fqp"; depends=[caret e1071 nnet rmarkdown shiny]; }; - MNLpred = derive2 { name="MNLpred"; version="0.0.4"; sha256="0kazydv6ln6vh5a1l72gg7v4v6j0pma7c3qxlfsgy6p73fhr5hxk"; depends=[MASS]; }; + MNLpred = derive2 { name="MNLpred"; version="0.0.6"; sha256="0j2cckskd4d5mnssy64nzkimp5qyrvkcsqmbigmi7lr52iga7m3s"; depends=[MASS]; }; MNM = derive2 { name="MNM"; version="1.0-3"; sha256="16b2yrm2kn943vzrr38qhk6qq20a842xv7iiln4is02csijxw2b3"; depends=[ellipse ICS ICSNP SpatialNP]; }; MNP = derive2 { name="MNP"; version="3.1-1"; sha256="0hzm048afxick1r8y26dj478mn9kwaww5v2s0b9ks1i01vbjakcl"; depends=[MASS]; }; MNS = derive2 { name="MNS"; version="1.0"; sha256="0if46a6rw0f2d72wnykkaa5z5b1p2c0r43il6cbwbcnnb3zd8acb"; depends=[doParallel glmnet igraph MASS mvtnorm]; }; @@ -2598,9 +2681,11 @@ in with self; { MOEADr = derive2 { name="MOEADr"; version="1.1.1"; sha256="0aqkqw5ph5rvsgpasc94i264lxapr37gpjhk4rkkynph2gnvq1zx"; depends=[assertthat FNN]; }; MOLHD = derive2 { name="MOLHD"; version="0.2"; sha256="1lrl24x7iig15jwxigvqm3jdwnxkn948sxmywn6zi2b1a5hqz05k"; depends=[arrangements fields]; }; MOQA = derive2 { name="MOQA"; version="2.0.0"; sha256="17w4iwf38k0r2fiwqr420hkbbz1a3r89sqwnd2yn300zmaz64hpr"; depends=[gplots psych readr]; }; + MOSS = derive2 { name="MOSS"; version="0.1.0"; sha256="0qxqh92ypsx39zjdsyg8icml74ig24igmi8nbzg6dnslvl1f9sfm"; depends=[cluster dbscan Rtsne]; }; MOST = derive2 { name="MOST"; version="0.1.0"; sha256="0nmjx5hsn67hdglcqyanq3az76rs15knv8qy28f8paah5s9w24xf"; depends=[]; }; MOTE = derive2 { name="MOTE"; version="1.0.2"; sha256="17y2l2rmw7fhvknyh5z09i7hd8nhamx12g00rcymp75gqkz9lzc7"; depends=[ez MBESS reshape]; }; MOrder = derive2 { name="MOrder"; version="0.1"; sha256="1vhy20xyvfc18f04hvlb1jm2n0caaz8ysy13w2rra5i4kjdvz52i"; depends=[]; }; + MPAgenomics = derive2 { name="MPAgenomics"; version="1.2.3"; sha256="0096jy94zpbbd2n862hc4m3i4s7vpl2q3vybx96hvv6qi1ny47cm"; depends=[changepoint glmnet HDPenReg R_utils spikeslab]; }; MPBoost = derive2 { name="MPBoost"; version="0.1-3"; sha256="0fmyy4s2h7hjca6nww0bgcax7309nkqp295mpp8hl8yllz7ylmsm"; depends=[BH Rcpp]; }; MPCI = derive2 { name="MPCI"; version="1.0.7"; sha256="1l55q09lliv0y4q1hc0jgzls47wkmsfag6b4iq5y6wrllr5wq7sa"; depends=[]; }; MPDiR = derive2 { name="MPDiR"; version="0.1-19"; sha256="14bjb9c1v2si3gan1pfvvhmfa46q1qrn606sb4zvrqpfs8f7wil7"; depends=[]; }; @@ -2613,26 +2698,27 @@ in with self; { MPSEM = derive2 { name="MPSEM"; version="0.3-6"; sha256="0kw3aixhl5j8nq4lcx65l80v4lihvpa4qd12n2jrc96lnm6mw00b"; depends=[ape MASS]; }; MPTinR = derive2 { name="MPTinR"; version="1.13.0"; sha256="16824bydfgm3wf63hrf9lwqwybdvrl3835pk8irl482y6v6x3h91"; depends=[Brobdingnag numDeriv Rcpp RcppEigen]; }; MPTmultiverse = derive2 { name="MPTmultiverse"; version="0.4-2"; sha256="0fjfj8jk0dk1s3jc9rl9kza6gm5pm6dgsqyk0aq7pir2hrsr3qwy"; depends=[coda dplyr ggplot2 limSolve magrittr MPTinR purrr readr reshape2 rlang runjags tibble tidyr TreeBUGS]; }; - MPV = derive2 { name="MPV"; version="1.55"; sha256="127m19q5dq38x2k29rkgvvfidazbmzsarzf9m2sjpx6ay8j8hvpl"; depends=[KernSmooth]; }; + MPV = derive2 { name="MPV"; version="1.57"; sha256="1b2xxkh55lzz9addjxa0jjp3lrpf6c31knah4xwhgbmrg4r6rl0n"; depends=[KernSmooth lattice]; }; MPkn = derive2 { name="MPkn"; version="0.1.0"; sha256="0nvd6sv1wypcmphm0wcymbibcxrqzx3c9s9b191p1pmxyz607vxv"; depends=[]; }; MPsychoR = derive2 { name="MPsychoR"; version="0.10-8"; sha256="19gp2pjy8bllk4pbx139vcydnw04nldfqq9q7291vr5krylfjcqv"; depends=[]; }; MQMF = derive2 { name="MQMF"; version="0.1.1"; sha256="0cbcmrgd3jvr2b95awklzsr694dqxgc5kk840r293qvhpsbxf27y"; depends=[MASS mvtnorm]; }; MRCV = derive2 { name="MRCV"; version="0.3-3"; sha256="0m29mpsd3kackwrawvahi22j0aghfb12x9j18xk4x1w4bkpiscmf"; depends=[tables]; }; MRFA = derive2 { name="MRFA"; version="0.4"; sha256="1ivzyp3q2nb6h5mhykina75ak7ajfw62rh23yr4pljma7gmr1hhm"; depends=[fields foreach glmnet grplasso plyr randtoolbox]; }; - MRFcov = derive2 { name="MRFcov"; version="1.0.37"; sha256="1xh7zlnkr93bdgcfmfvrwjc3rj6mfqsxl2rpbzzm204q7n1dh502"; depends=[caret dplyr ggplot2 glmnet gridExtra igraph magrittr MASS Matrix mgcv pbapply plyr purrr reshape2 sfsmisc]; }; + MRFcov = derive2 { name="MRFcov"; version="1.0.38"; sha256="1ajpnxx49zpmph21x0q4x9w4fjpi43s8sqm294i0l883khyx6ljg"; depends=[caret dplyr ggplot2 glmnet gridExtra igraph magrittr MASS Matrix mgcv pbapply plyr purrr reshape2 sfsmisc]; }; MRH = derive2 { name="MRH"; version="2.2"; sha256="1icwlq8js58g9fkiq7fwjg8r97ca47xl3dscnhnga99gkgsfgjwl"; depends=[coda KMsurv survival]; }; MRHawkes = derive2 { name="MRHawkes"; version="1.0"; sha256="0qhwm708jijv1w6iml18bg7fc2igdcmydwpb9dzpa4gwwads8b78"; depends=[IHSEP]; }; MRMR = derive2 { name="MRMR"; version="0.1.4"; sha256="0dgbhlynaaka7mdzl6igwgcdzvy6cm2y8mbxaf9pfla8w3z8y0lq"; depends=[ggplot2 lmtest lubridate plyr reshape2]; }; - MRPC = derive2 { name="MRPC"; version="2.2.1"; sha256="02aa52gk0kflf21hzszsfvmwyvq8n21cxzraxqf1v6f1d41n2w89"; depends=[bnlearn compositions dynamicTreeCut fastcluster GGally graph gtools Hmisc mice network pcalg plyr psych Rgraphviz sna WGCNA]; }; + MRPC = derive2 { name="MRPC"; version="2.3.1"; sha256="1gjk8nq0fwzlfqc3nd6kw2052znglzpblh2hyc5b0znmh678pxgc"; depends=[bnlearn compositions dynamicTreeCut fastcluster GGally graph gtools Hmisc mice network pcalg plyr psych Rgraphviz sna WGCNA]; }; MRQoL = derive2 { name="MRQoL"; version="1.0"; sha256="0isn4g3jpz7wm99ymrshl6zgkb7iancdzdxl2w98n8fbxsh5z6sw"; depends=[]; }; - MRReg = derive2 { name="MRReg"; version="0.1.2"; sha256="18s9f61fgpmj5wwsg8q8w675mbg9ii4hngzh54bpbml44k3v91cf"; depends=[caret igraph]; }; + MRReg = derive2 { name="MRReg"; version="0.1.4"; sha256="0krk9l46ls74dldilkkdf1b202awnql8r138fkxj4h6n8x3psysw"; depends=[caret igraph]; }; MRS = derive2 { name="MRS"; version="1.2.4"; sha256="1sksg70zb72ys1b7vi8amjaqarmdh8vf2l1rb0rasrlvrip3z3br"; depends=[igraph Rcpp RcppArmadillo]; }; MRTSampleSize = derive2 { name="MRTSampleSize"; version="0.3.0"; sha256="03c6jkanff241rcv1yixvmlnya3sd8hqpawf9dx9mpsri4pp6mdk"; depends=[]; }; + MRTSampleSizeBinary = derive2 { name="MRTSampleSizeBinary"; version="0.1.0"; sha256="081yr1yy6fxgqrix499rxkfjbp9zhlw6mksbpwv88hvbx3ymc7rg"; depends=[dplyr ggplot2 Matrix]; }; MRmediation = derive2 { name="MRmediation"; version="1.0.1"; sha256="0v0kn6x4fwj35imj1fb2f2024ifb7081z4cwlhjmdxhabcy6xbx7"; depends=[fda MASS]; }; MRsurv = derive2 { name="MRsurv"; version="0.2"; sha256="148myzk6r8whkpv1yv59dmdlr2n8vdwmaww165aw696xfjxwq550"; depends=[mvtnorm survival]; }; MSCMT = derive2 { name="MSCMT"; version="1.3.4"; sha256="1vh0i9nxqiy3qdnb7z7cn5kpp2jahdmaqpnv7q5650pkswhwmfpc"; depends=[ggplot2 lpSolve lpSolveAPI Rdpack Rglpk]; }; - MSCquartets = derive2 { name="MSCquartets"; version="1.0.5"; sha256="0gfbawv7ib31pxmcj8ki67a72jqacm8nlizgk95yg7afjlqiyz8v"; depends=[ape phangorn RandomFieldsUtils Rdpack zipfR]; }; - MSEtool = derive2 { name="MSEtool"; version="2.0.1"; sha256="0d9kyz8gbax4g4hmnjgkq3j0rx67zhrw2fx7y4y60kjc6i299f7i"; depends=[abind coda corpcor DLMtool dplyr gplots MASS mvtnorm RcppEigen reshape2 rmarkdown snowfall TMB]; }; + MSCquartets = derive2 { name="MSCquartets"; version="1.1.0"; sha256="1rik3ma537qkj63j5v0gcf6g3qi68z49w21z96mm88b7nq15xpjh"; depends=[ape doParallel foreach phangorn RandomFieldsUtils Rdpack zipfR]; }; + MSEtool = derive2 { name="MSEtool"; version="3.0.2"; sha256="185jk4bciyi5m5xwmhzml6a7kw245jws0c2jb5qdi24iwl2j68wb"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo snowfall]; }; MSG = derive2 { name="MSG"; version="0.6"; sha256="19pckq41gyy4m97ag5q97lbdchl4fpx9xd8xv9r0jmlj66mz2dm7"; depends=[RColorBrewer]; }; MSGARCH = derive2 { name="MSGARCH"; version="2.42"; sha256="1n5fvj6yx8sfi1vizw89410hc0d37w8mpqfsksdv01pgnfdcs11a"; depends=[coda expm fanplot MASS numDeriv Rcpp RcppArmadillo zoo]; }; MSGARCHelm = derive2 { name="MSGARCHelm"; version="0.1.0"; sha256="172xpvs98b9ay44ffb8bp9k4zsjzhy92pp7bv3d1j186pqhl13ib"; depends=[forecast MSGARCH nnfor]; }; @@ -2641,11 +2727,12 @@ in with self; { MSPRT = derive2 { name="MSPRT"; version="3.0"; sha256="0fvikvnf3fa4ski9idg8llxx33bgkrfj5sgkjn0d1dz30kgcx2w2"; depends=[doParallel foreach ggplot2 ggpubr iterators nleqslv]; }; MSQC = derive2 { name="MSQC"; version="1.0.2"; sha256="11wcy04cpjlnc71s2svs4lm1cp718dz1p4a1603x6zwpbf22bygn"; depends=[rgl]; }; MSRDT = derive2 { name="MSRDT"; version="0.1.0"; sha256="1i35zsip6p177k9pnbmvkjdc1hpr6nclhbx2sfah95ls5v6xnzz8"; depends=[dplyr gtools reshape2]; }; + MSSQL = derive2 { name="MSSQL"; version="1.0.0"; sha256="15glgn2dr1yygxps0mx68435zqc2hi4hvgr4rvgrwyxdnlm5g35y"; depends=[RODBC]; }; MST = derive2 { name="MST"; version="2.2"; sha256="0p833nyq9p0r0hy02f4sy6gv1wm9flj3dxkv73ihy8503r89bbzz"; depends=[Formula MASS partykit survival]; }; - MSbox = derive2 { name="MSbox"; version="1.2.2"; sha256="10bm9fgbwn51knclxrya3a5cj9s43wlcvfm2vkfjawamccyiw94q"; depends=[crayon stringr]; }; + MSbox = derive2 { name="MSbox"; version="1.3.9"; sha256="08aqhcnsv0a5gaq69fnfw7vj223s7nwq2skbd6fgqnr6yvpwbsyp"; depends=[crayon ggfortify ggplot2 plotly reshape2 stringr xml2]; }; MScombine = derive2 { name="MScombine"; version="1.4"; sha256="0s3gbf3s5mf00d5mkbqhd9wwnyps7qb4r3zbal8j8nsaspql9nd3"; depends=[plyr]; }; MSwM = derive2 { name="MSwM"; version="1.4"; sha256="1zhfar02s7hm4gjs1flkh9a4526d98hik8bqrksy75758baiqg7l"; depends=[nlme]; }; - MTA = derive2 { name="MTA"; version="0.2.0"; sha256="1wic2rw63h2daha23fpyw80x7ywjwqq6rj5jg73iankvdg32mlvm"; depends=[cartography igraph sf sp]; }; + MTA = derive2 { name="MTA"; version="0.3.0"; sha256="01q98k88vqf0avnfavlscfkgsixm76hi4gip0iwl28w89z09bc0n"; depends=[cartography igraph sf]; }; MTAR = derive2 { name="MTAR"; version="0.1.1"; sha256="17r2da1hdvs8qvgar87zdl51jy8w30vczcsi6jrq0rdyi1lld641"; depends=[CompQuadForm MASS Matrix]; }; MTDrh = derive2 { name="MTDrh"; version="0.1.0"; sha256="0ass3b90nr4i0y7v30hk8xhq3hj9bxaxcsr4f8wfi0lnvzfv6aaa"; depends=[]; }; MTLR = derive2 { name="MTLR"; version="0.2.1"; sha256="070121qn7vmxmxgvzv7ymhk19j9kxks4xa7qpd8vkc2rp3ara4cp"; depends=[Rcpp RcppArmadillo survival]; }; @@ -2654,7 +2741,7 @@ in with self; { MTSYS = derive2 { name="MTSYS"; version="1.2.0"; sha256="04dkan3hxl3difflskp7d1lw1bvxhg4s28ssy2v4m7z7wbpj3v1m"; depends=[]; }; MUACz = derive2 { name="MUACz"; version="2.1.0"; sha256="1d771vb2aimr87kyqj7zkmwarmxcxzbh7mvr396pf2zr3h8wi30c"; depends=[dplyr epiDisplay ggplot2]; }; MUS = derive2 { name="MUS"; version="0.1.6"; sha256="0xid624rz0mvd03iy7ydvmx7gkscvsg4kdbaf2nji54ahai3pmn3"; depends=[]; }; - MVA = derive2 { name="MVA"; version="1.0-6"; sha256="09j9frr6jshs6mapqk28bd5jkxnr1ghmmbv6f4zz0lrg81zjizl3"; depends=[HSAUR2]; }; + MVA = derive2 { name="MVA"; version="1.0-7"; sha256="00vng8z157qn0bj2mcnz31r6mn1a119vja9pzhpdkhkbvvd6ph5v"; depends=[HSAUR2]; }; MVB = derive2 { name="MVB"; version="1.1"; sha256="0an8b594rknlcz6zxjva6br8f34sgwdi2jil3xh1xzb5fa55dw0f"; depends=[Rcpp RcppArmadillo]; }; MVLM = derive2 { name="MVLM"; version="0.1.4"; sha256="1zcj405dc4jbiqw6p0fcbam8yc9d6yjpmrx5wjw5zjvig3iqb91k"; depends=[CompQuadForm]; }; MVN = derive2 { name="MVN"; version="5.8"; sha256="1rk8zrf3bavywv4bca1aqsfrirxkvxh5lfwrnj0g8zncd69bd1fc"; depends=[boot car energy kableExtra magrittr MASS moments mvoutlier nortest plyr psych robustbase]; }; @@ -2663,16 +2750,17 @@ in with self; { MVQuickGraphs = derive2 { name="MVQuickGraphs"; version="0.1.2"; sha256="1937w8y866bsn9kn6a98c91akhm9ddc5dr9wqm51lkbjyz1zm0j1"; depends=[plotrix]; }; MVR = derive2 { name="MVR"; version="1.33.0"; sha256="1ygz47a2p5r5axql5zsxvsn25pcqyxz6mpw50zfmzrcqdrfa3bg8"; depends=[statmod]; }; MVT = derive2 { name="MVT"; version="0.3"; sha256="0vinlv3d5daf8q7pd9xgs51nxz2njgdba5750vygmv883srlzi9d"; depends=[]; }; - MVar = derive2 { name="MVar"; version="2.1.3"; sha256="1zwrdwi7gb6cilv7ynb73rprkig9m0gjmbq9pnnbwmq5fkcq6zml"; depends=[MASS]; }; - MVar_pt = derive2 { name="MVar.pt"; version="2.1.3"; sha256="1lg0npniygf9avi3fsk5g6mrkly1xif8rf91w17hpmvnr0hnz248"; depends=[MASS]; }; + MVTests = derive2 { name="MVTests"; version="2.0.3"; sha256="1570npawv03nb5czikkl63swgx3dafxhmdpm2mlcwi0nfhbc69xm"; depends=[]; }; + MVar = derive2 { name="MVar"; version="2.1.4"; sha256="0lr16b54yg8yz6sh29v7vsg6h94f23005xm4fwk39h8jgw7v4d99"; depends=[MASS]; }; + MVar_pt = derive2 { name="MVar.pt"; version="2.1.4"; sha256="0bvinszi4nmz755i5d0nllkzqcq8q0qd54gvbwzbz992314lv2h7"; depends=[MASS]; }; MVisAGe = derive2 { name="MVisAGe"; version="0.2.1"; sha256="1plrzzj7cr2hxk1npadvjnk7sanhilh99l5vrkjjh3l6li2ym09b"; depends=[]; }; MWLasso = derive2 { name="MWLasso"; version="1.3.1"; sha256="11lyk46lmjcd60q0mixi41b8ybjgyp1xi18g3ag4450xyhw3r17s"; depends=[]; }; MWRidge = derive2 { name="MWRidge"; version="1.0.0"; sha256="17kvs9npr1ff24z3pv9x2qnfwyy6w3hc7hm60ynzbjlk2rr11xr9"; depends=[glmnet]; }; MWright = derive2 { name="MWright"; version="0.3.2"; sha256="1c57f0wnlhl4gqy17vi93r4fknycvv67b9bifgcvabws390jpx7q"; depends=[cubature]; }; - MXM = derive2 { name="MXM"; version="1.4.9"; sha256="14iksg94dc2bqfdjhj83z1zxwj67zsqn4rj0f1g59fj7843z4k6s"; depends=[bigmemory coxme doParallel dplyr energy foreach geepack Hmisc knitr lme4 MASS nnet ordinal quantreg relations Rfast Rfast2 survival visNetwork]; }; + MXM = derive2 { name="MXM"; version="1.5.1"; sha256="16vy2cq4xxxl9c55s66xwjdi8fq98gyfjb06x4lnh6gbc9pj7g1x"; depends=[bigmemory coxme doParallel dplyr energy foreach geepack Hmisc knitr lme4 MASS nnet ordinal quantreg relations Rfast Rfast2 survival visNetwork]; }; MaOEA = derive2 { name="MaOEA"; version="0.6.2"; sha256="0s8jvp7821mb6xff8xwnh78mhz4qfrbk4g7sp4dfnm2ii7ah9c6b"; depends=[e1071 gtools lhs MASS nnet nsga2R pracma randtoolbox reticulate stringr]; }; MaXact = derive2 { name="MaXact"; version="0.2.1"; sha256="1n7af7kg54jbr09qk2a8gb9cjh25cnxzj2snscpn8sr8cmcrij0i"; depends=[mnormt]; }; - MachineShop = derive2 { name="MachineShop"; version="2.5.0"; sha256="0awx838zjb2n2b9r32cx9h1cvg3h4x57xsif9hskjp5mba9pk78x"; depends=[abind dials foreach ggplot2 kernlab magrittr Matrix nnet party polspline progress recipes rlang rsample Rsolnp survival tibble]; }; + MachineShop = derive2 { name="MachineShop"; version="2.8.0"; sha256="121r5h6hkvjlb1y3hbjaabgn19h5977ilf0mc6yz1gh9qlsr0y77"; depends=[abind dials foreach ggplot2 kernlab magrittr Matrix nnet party polspline progress recipes rlang rsample Rsolnp survival tibble]; }; Maeswrap = derive2 { name="Maeswrap"; version="1.7"; sha256="0cnnr5zq7ax1j7dx7ira7iccqppc6qpdjghjarvdb2zj0lf69yyb"; depends=[geometry lattice rgl stringr]; }; MajKMeans = derive2 { name="MajKMeans"; version="0.1.0"; sha256="1zphrxyx3jd6rnh1y1qnc6bip34kfqk1a5ms4ps39gfngznh482m"; depends=[MASS]; }; MakefileR = derive2 { name="MakefileR"; version="1.0"; sha256="1pfjic2lsar8ghbb6byr4rqrs30qrgfih092z4rxdpsiwkk3y7l1"; depends=[magrittr]; }; @@ -2686,43 +2774,41 @@ in with self; { MareyMap = derive2 { name="MareyMap"; version="1.3.6"; sha256="0zbg72vck9p14zk1924407n5ap84qiisqhbq1vr715sw67fwdcxi"; depends=[]; }; MargCond = derive2 { name="MargCond"; version="1.0.0"; sha256="07qh1lgy8ds11cwlb4rxkl6aiph91zq29sy27b8wwxalycdgjrg8"; depends=[gee lme4 MASS Matrix]; }; MarginalMediation = derive2 { name="MarginalMediation"; version="0.7.0"; sha256="0jwp8rzv0ghir8k7dfmfrq4rvcqf7xww6va16p3jj2nk3r9hiq0x"; depends=[betareg boot cli crayon furniture magrittr purrr rstudioapi stringr tibble]; }; - MarketMatching = derive2 { name="MarketMatching"; version="1.1.2"; sha256="0i3wccclrl7lixny24jif0xvmf6lgmwsgqxc6h5c3mv405cp0h1r"; depends=[bsts CausalImpact data_table doParallel dplyr dtw foreach ggplot2 iterators reshape2 scales zoo]; }; - Markovchart = derive2 { name="Markovchart"; version="1.1.1"; sha256="0w15a19b35hah3zjbncgw4bq8ki1wdd86r90y1pr9fhw4vgmc1w2"; depends=[doParallel foreach ggplot2 metR optimParallel]; }; + MarketMatching = derive2 { name="MarketMatching"; version="1.2.0"; sha256="075maishssvjrx0jfmxcfiv2rlhnm0c4dnp6ija3bn5z80i6z91m"; depends=[Boom bsts CausalImpact doParallel dplyr dtw foreach ggplot2 iterators reshape2 scales tidyr utf8 zoo]; }; + Markovchart = derive2 { name="Markovchart"; version="2.0.0"; sha256="1nrc88pdyyljqwszg60c663icz31mpydrgixzkys4a8f861by3b0"; depends=[doParallel foreach ggplot2 metR optimParallel]; }; MarkowitzR = derive2 { name="MarkowitzR"; version="1.0.2"; sha256="0p234zs7lvi83fv02mijrhp7hmr5cklddayb61krhx1h2hn4gzb9"; depends=[gtools matrixcalc]; }; MaskJointDensity = derive2 { name="MaskJointDensity"; version="1.0"; sha256="0nxhsz57cw96in0sg5xg7sicv920kcnxr2rikn39y2qk4vrw6r78"; depends=[ks MASS np plyr]; }; Massign = derive2 { name="Massign"; version="1.1.0"; sha256="09i32lsrx40rxrnb9alfipfrkipy4mza5nr4gcpn2a5h86ak9290"; depends=[]; }; MasterBayes = derive2 { name="MasterBayes"; version="2.57"; sha256="0f8rc6799nji03slal27gbmprndy3dby0hhsmg2rm9l4ki44vz2y"; depends=[coda genetics gtools kinship2]; }; MatManlyMix = derive2 { name="MatManlyMix"; version="1.1.1"; sha256="1d2vd5b9lirdybjclxh0nn4mghq64qjj4l8vnj95cni5pfa18a2c"; depends=[]; }; MatSkew = derive2 { name="MatSkew"; version="0.1.5"; sha256="019v2b1r0bvw84xs50smjb3jdz7gd2adz5d84xd8zq43lnml96d1"; depends=[]; }; - MatTransMix = derive2 { name="MatTransMix"; version="0.1.12"; sha256="0ygs4xnhkp50xb8238h3gis87z17ahvl0ywxysbiz26mnn751j5y"; depends=[mvtnorm]; }; MatchIt = derive2 { name="MatchIt"; version="4.1.0"; sha256="18bvk73mf70a8r9js2mg8fn0yj0i1d1xaj8qg1mhrdygp35nfixk"; depends=[backports Rcpp RcppProgress]; }; MatchLinReg = derive2 { name="MatchLinReg"; version="0.7.3"; sha256="1si0zn6vlgyj08841hfjx8an96a8ipnawl4zbalabmpy7r5bfwx8"; depends=[Hmisc Matching]; }; - MatchThem = derive2 { name="MatchThem"; version="0.9.3"; sha256="05m141qn0a9ahraga1lpcjffbddmm70bx9m3javrr9727nnar9wf"; depends=[broom dplyr MatchIt mice survey WeightIt]; }; - Matching = derive2 { name="Matching"; version="4.9-7"; sha256="0vgw0nm40bicda2nwgklc27qsjxbqbjpl9yd28hqxj71xfsyqmhr"; depends=[MASS]; }; - Matrix = derive2 { name="Matrix"; version="1.3-0"; sha256="1hkxzxdqdlbxf3ai371amrj9s4b0fyibf5j9jdc00k1m2zwr3nl7"; depends=[lattice]; }; + MatchThem = derive2 { name="MatchThem"; version="1.0.0"; sha256="11r8r7vij8ixa07g48pds993a5m7ir9m894wms5whrb8sxd47q5i"; depends=[MatchIt mice rlang survey WeightIt]; }; + Matching = derive2 { name="Matching"; version="4.9-9"; sha256="0j4s8drvc0mpxrah4h1whdilbf58y24mjxs45lyb5q7i91rp74lw"; depends=[MASS]; }; + Matrix = derive2 { name="Matrix"; version="1.3-3"; sha256="0fvayd6b8w6yzhil85xw7lib68dvxyzpcznwvwczlyxf8ggchzpp"; depends=[lattice]; }; Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.8"; sha256="0a5fq1scykqk0kc9j051j6fix6j2dqwz5wbgb0amaxsiywz9vigb"; depends=[grr Matrix]; }; - MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.9.4"; sha256="1p98ixz81swvf6d934h4djpgbi46x1hwbhrbxap5ywidplfi322i"; depends=[plotrix pracma progress Rcpp RcppArmadillo RSpectra]; }; + MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.9.5"; sha256="192pmfm8csvs2lf2hxpsj542lrd8b74rg4wzmz3s3m9i98pd0h4d"; depends=[plotrix pracma progress Rcpp RcppArmadillo RSpectra]; }; MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.3"; sha256="10r6h5bidj44kfbwiml9pkysbikqphfb21ig61qnx0qa12xcl6l8"; depends=[]; }; MatrixLDA = derive2 { name="MatrixLDA"; version="0.2"; sha256="0fixq35gp0fzmin75sfld2ln0zvnjgzrhk3b5yi7wdqzp99200yy"; depends=[glasso plyr Rcpp RcppArmadillo]; }; - MatrixModels = derive2 { name="MatrixModels"; version="0.4-1"; sha256="0cyfvhci2p1vr2x52ymkyqqs63x1qchn856dh2j94yb93r08x1zy"; depends=[Matrix]; }; + MatrixModels = derive2 { name="MatrixModels"; version="0.5-0"; sha256="1va6i6bpkq71rzl9i4xgyc5x7qcksa3nfzihlaggf6aj30dayzx8"; depends=[Matrix]; }; MaxMC = derive2 { name="MaxMC"; version="0.1.1"; sha256="0n6m5h8n3gwmlqq563rpdx4l8ldzl6jx3ga50ygvlnamdj3wjqgm"; depends=[GA GenSA NMOF pso scales]; }; MaxPro = derive2 { name="MaxPro"; version="4.1-2"; sha256="19a2wp93kx1wkbzd5bvljbm1rr96gr14w4fb0ppbgr2y2a4g8i1v"; depends=[nloptr]; }; MaxSkew = derive2 { name="MaxSkew"; version="1.1"; sha256="0x5x0jpvhp189jnmgh6d1h3ya0dicj5qfcrgr2fhp1v8jjhl125m"; depends=[]; }; MaxentVariableSelection = derive2 { name="MaxentVariableSelection"; version="1.0-3"; sha256="1cmxfdkm5k85b4ivlfy5521hkfj0gq2pb1qlxxklh0fprw87kp9c"; depends=[ggplot2 raster]; }; MazamaCoreUtils = derive2 { name="MazamaCoreUtils"; version="0.4.6"; sha256="02qk8xlrvkpd36hx92yn1162ggfg6y0w6xxivw22wpzbq8mc7inn"; depends=[devtools dplyr futile_logger lubridate magrittr purrr rlang rvest stringr tibble xml2]; }; - MazamaLocationUtils = derive2 { name="MazamaLocationUtils"; version="0.1.6"; sha256="187lrpc9z3k4jnd1nvqsb0qibz9xz9i1i61vssqm72h1hx1j9j6f"; depends=[digest dplyr geodist httr lubridate magrittr MazamaCoreUtils MazamaSpatialUtils readr revgeo rlang stringr]; }; + MazamaLocationUtils = derive2 { name="MazamaLocationUtils"; version="0.1.13"; sha256="0ni48lng6m3lkn039c4542ldawqsbqfb0ag5m947i11q4anv9pi5"; depends=[digest dplyr geodist httr jsonlite lubridate magrittr MazamaCoreUtils MazamaSpatialUtils readr rlang stringr]; }; MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.7.3"; sha256="1ckgsrjy1vxk4zf7p8fw25bb7hw59262pwfmk7414mv7xi4fij2g"; depends=[cleangeo countrycode dplyr magrittr MazamaCoreUtils rgdal rgeos rlang rmapshaper sp stringr tidyr]; }; - McSpatial = derive2 { name="McSpatial"; version="2.0"; sha256="18nmdzhszqcb5z9g8r9whxgsa0w3g7fk7852sgbahzyw750k95n4"; depends=[lattice locfit maptools quantreg RANN SparseM]; }; Mcomp = derive2 { name="Mcomp"; version="2.8"; sha256="1wz5fr3dhxn4s0qvxm2mzq9dbz3x0vgh6pixjrgk9d4i9w2p7s60"; depends=[forecast ggplot2]; }; MeTo = derive2 { name="MeTo"; version="0.1.0"; sha256="14hdyh3p3q8yb9w2li2y9pc356jnymsn6n2750zdsrh52b751lpm"; depends=[lubridate]; }; MedDietCalc = derive2 { name="MedDietCalc"; version="0.1.1"; sha256="11q1yn6l697qa33wqik9y9lji39r6pph109yxkkprg9p80c187xy"; depends=[]; }; + MedLEA = derive2 { name="MedLEA"; version="1.0.1"; sha256="0lw3m0wdsiypkyvpiacj4k9534x9clna38pwr4mrdy09hc435q3j"; depends=[patchwork tidyverse tm wordcloud2]; }; MedOr = derive2 { name="MedOr"; version="0.1"; sha256="1rwc14s16lnzgb78ac2017hv9pss7zw7nw3y7vrvq1qx4fgiw6f8"; depends=[]; }; MedSurvey = derive2 { name="MedSurvey"; version="1.1.1.3.0"; sha256="11lkli2arl5w2aizzd93fb6xsy30000nf3qc08qirrm07rwypaly"; depends=[lavaan Matrix survey]; }; MediaK = derive2 { name="MediaK"; version="1.0"; sha256="19cmxl2wksw9kvjsfn1m4nkr5gpcx6bk0sqrabj1n0dla1l32v2a"; depends=[Rcpp RcppEigen]; }; Mediana = derive2 { name="Mediana"; version="1.0.8"; sha256="0j1ikc2iaxl70134v0gijj2i2g0xgjafvn8rc108r9fhm8rpw564"; depends=[doParallel doRNG foreach MASS mvtnorm survival]; }; - Mega2R = derive2 { name="Mega2R"; version="1.0.8"; sha256="1p81p371r721wcfz3qrc9l2bbk0v91csgqc961dx2sl7llhmj1fr"; depends=[AnnotationDbi DBI famSKATRC gdsfmt GenomeInfoDb kinship2 pedgene Rcpp RSQLite SKAT]; }; - MendelianRandomization = derive2 { name="MendelianRandomization"; version="0.5.0"; sha256="00gygggy0yl1qby5xdb8g7z8jllrxf4jwksy8a640qpv5v84r6al"; depends=[ggplot2 glmnet iterpc knitr Matrix plotly quantreg rjson rmarkdown robustbase]; }; - Mercator = derive2 { name="Mercator"; version="0.11.5"; sha256="0lv1gj0dfh37613gapm0mr1vxj5vsnfyvfqilkmpkjnz0gyd0ay5"; depends=[ClassDiscovery cluster dendextend flexmix igraph KernSmooth Polychrome Rtsne Thresher]; }; + MendelianRandomization = derive2 { name="MendelianRandomization"; version="0.5.1"; sha256="1qi5v4m19025zcigl6wxmj3vi6zjlzgsm6cj75kywq2qabrzk2fw"; depends=[ggplot2 glmnet iterpc knitr Matrix plotly quantreg rjson rmarkdown robustbase]; }; + Mercator = derive2 { name="Mercator"; version="1.0.0"; sha256="15nps7yis3l3479spd407xlza4rl1lp5ya7cakv38c93848a89dh"; depends=[ClassDiscovery cluster dendextend flexmix igraph KernSmooth Polychrome Rtsne Thresher]; }; MetABEL = derive2 { name="MetABEL"; version="0.2-0"; sha256="0rqjv85mgswrbbp8b8ip6cdmz0cvfy9lm5mcr8a7h38rzgx3g3i3"; depends=[]; }; MetFns = derive2 { name="MetFns"; version="3.2.2"; sha256="15fd2d0yysibi2x43qv6b8i1pa18l7z4n0zpmrqhsmvqkgy8sla0"; depends=[astroFns lubridate plotrix pracma]; }; MetGen = derive2 { name="MetGen"; version="0.5"; sha256="00yzaicrpwfnxi5mdzwx1ai721vczkkf2yl50q9wwpxhmfx0xbbh"; depends=[chron glmnet MASS]; }; @@ -2732,20 +2818,20 @@ in with self; { MetaClean = derive2 { name="MetaClean"; version="1.0.0"; sha256="12vgdizggyz6wx08qf34jfhwgpzfrkgq63fvhfgi5gbf1nhma5zz"; depends=[BiocStyle caret fastAdaboost ggplot2 graph kernlab klaR knitr MLmetrics plotrix randomForest reshape2 Rgraphviz rpart xcms]; }; MetaComp = derive2 { name="MetaComp"; version="1.1.2"; sha256="1yb115qdmf5rxmjl4y7qr0i6668n46scs4yjpfq9bmy3w9i4ji1x"; depends=[Cairo data_table dplyr ggplot2 plyr reshape2]; }; MetaCycle = derive2 { name="MetaCycle"; version="1.2.0"; sha256="1lh1msrcz70p5jixz5j83pqa3cid21y7m1zvlk872k16awmif00k"; depends=[gnm]; }; - MetaDBparse = derive2 { name="MetaDBparse"; version="1.0.0"; sha256="166z1zmrs19ngcdqdxzpdshqvrk8pxx1rlr1harjbzyh0bv3pv46"; depends=[ChemmineR cmmr data_table DBI enviPat gsubfn Hmisc httr jsonlite KEGGREST openxlsx pacman pbapply progress R_utils rcdk RCurl Rdisop readxl reshape2 rJava RJSONIO rlist RSQLite rvest SPARQL stringi stringr webchem WikidataQueryServiceR XML xml2 zip]; }; - MetaIntegration = derive2 { name="MetaIntegration"; version="0.1.1"; sha256="0dsc6s8msi08rz7j8jbjd0p2wa3xsfriyxi6r42dhfd21bfcsw7v"; depends=[corpcor knitr MASS Rsolnp]; }; + MetaDBparse = derive2 { name="MetaDBparse"; version="2.0.0"; sha256="0ssbjm9x3f7j2blpjdjfcsrp2486g55rwkw7xhlkrw307q6i40gq"; depends=[ChemmineR cmmr data_table DBI enviPat gsubfn Hmisc httr jsonlite KEGGREST pacman pbapply progress R_utils rcdk RCurl Rdisop readxl reshape2 rJava RJSONIO rlist RSQLite rvest SPARQL stringi stringr webchem WikidataQueryServiceR XML xml2 zip]; }; + MetaIntegration = derive2 { name="MetaIntegration"; version="0.1.2"; sha256="0dbmpls6gipd81c79lvxqgyhzl3nmi0ma4szv8fcrh50jbwfvsql"; depends=[corpcor knitr MASS Rsolnp]; }; MetaIntegrator = derive2 { name="MetaIntegrator"; version="2.1.3"; sha256="1763in7zcfr4abhwc0sy27c1qbzbhkyjsasrhwdjjmsc645sqxlx"; depends=[AnnotationDbi Biobase BiocManager boot COCONUT data_table DBI dplyr DT GEOmetadb GEOquery ggplot2 ggpubr gplots HGNChelper httpuv magrittr manhattanly Metrics multtest pheatmap plotly plyr pracma preprocessCore readr reshape2 rmarkdown rmeta Rmisc RMySQL ROCR RSQLite stringr zoo]; }; - MetaLandSim = derive2 { name="MetaLandSim"; version="1.0.7"; sha256="1vcwfrw20mjyf926zix530zzr0yw4yydg0i5r5rpddygbz5szd6g"; depends=[coda e1071 fgui googleVis igraph knitr maptools minpack_lm raster rgeos rgrass7 sp spatstat zipfR]; }; + MetaLandSim = derive2 { name="MetaLandSim"; version="1.0.8"; sha256="1p182792vx1nix385kpgvdl0yff12xy5v1k6giaj0cxgfvhrqqar"; depends=[coda e1071 fgui googleVis igraph knitr maptools minpack_lm raster rgeos rgrass7 sp spatstat_core spatstat_geom zipfR]; }; MetaLonDA = derive2 { name="MetaLonDA"; version="1.1.8"; sha256="0nalkmsii2anw07r16zcpgafb01l87hgpfr1mwc7nggvhdfp3w2g"; depends=[DESeq2 doParallel edgeR ggplot2 gss metagenomeSeq plyr pracma zoo]; }; MetaPath = derive2 { name="MetaPath"; version="1.0"; sha256="1vvpfv6yc4rd4apqfs2yzm97xxsv43ghwqnjq6w1xrc4pdx2p634"; depends=[Biobase genefilter GSEABase impute]; }; MetaStan = derive2 { name="MetaStan"; version="0.2.0"; sha256="035qmzkijaql5d9h1a83p535gihy4bbv9n839q9kpp0l05mdwgwm"; depends=[BH Rcpp RcppEigen rstan rstantools StanHeaders]; }; MetaSubtract = derive2 { name="MetaSubtract"; version="1.60"; sha256="19xg95g2qgyi90pz3733l596gzdj6dmb0k9i4qmhaq4yck69rrhj"; depends=[]; }; - MetaUtility = derive2 { name="MetaUtility"; version="2.1.0"; sha256="1lbqqh56pwxlcksv0kf463hc20jb4rkjqkcqal000rzyzd4bi2zj"; depends=[dplyr metafor purrr stringr]; }; + MetaUtility = derive2 { name="MetaUtility"; version="2.1.1"; sha256="1v37rpycciwrcwzs69qqb4c8nk2wg3ilaimaqbbfzvl33h1hhqwd"; depends=[dplyr metafor purrr rlang stringr tidyr]; }; MetaboList = derive2 { name="MetaboList"; version="2.0"; sha256="10skvf14ls4qll0l9p6cig4lmj7138khcksyjvd1pqym9axk3wxn"; depends=[dplyr enviPick ggplot2 scales]; }; MetaboLouise = derive2 { name="MetaboLouise"; version="1.0.0"; sha256="1agcp520in0wpxv3x2jvvmv61hasazdymnvjhzl66nwv8lifl98z"; depends=[igraph]; }; MetaboQC = derive2 { name="MetaboQC"; version="1.0"; sha256="1hm0ndwda1ciyyg8igkpaalvvdyd7aq5wnl9gzza8fr1l9fxp4a2"; depends=[plyr]; }; MetabolAnalyze = derive2 { name="MetabolAnalyze"; version="1.3.1"; sha256="070qws759nczjrfdlh7jpbyjz4z3zm1hzb7vcvfgfks82wwb2ny0"; depends=[ellipse gplots gtools mclust mvtnorm]; }; - MetabolomicsBasics = derive2 { name="MetabolomicsBasics"; version="1.1"; sha256="13q8s96s71g7nyr6mi5q7jwmf4vx3pcr8l9ixqlc8hglnkd0y6rk"; depends=[C50 caret e1071 mixOmics pcaMethods plyr rlang ropls rpart]; }; + MetabolomicsBasics = derive2 { name="MetabolomicsBasics"; version="1.2"; sha256="0gd93l9rm00x9g6ffppywpbccmhxgl4s4z4ba7al8lpjval9srzw"; depends=[C50 caret e1071 mixOmics pcaMethods plyr rlang ropls rpart]; }; MetaheuristicFPA = derive2 { name="MetaheuristicFPA"; version="1.0"; sha256="096k866mgrdgj55rzvdj080z80hzlj0667mydpz7gjaqdfriw8jg"; depends=[Rcpp RcppArmadillo]; }; Metatron = derive2 { name="Metatron"; version="0.1-1"; sha256="0apz2k3za19px1bcg4ls0axaljrpxnqhs86b6s862c370sspc1x8"; depends=[lme4 Matrix mpt]; }; Meth27QC = derive2 { name="Meth27QC"; version="1.1"; sha256="0ad30svs2kjzmmyvcm0jmv64iyq7slp1x1xl35h2rv1b6zbd4658"; depends=[gplots]; }; @@ -2754,12 +2840,12 @@ in with self; { Methplot = derive2 { name="Methplot"; version="1.0"; sha256="0aaqss9zfn55qi45jffxkksnkw510npjnkygafx49vl77bkagqh5"; depends=[ggplot2 reshape]; }; MethylCapSig = derive2 { name="MethylCapSig"; version="1.0.1"; sha256="16ch9aldr6a9jn42h387n7qvnzs0yx28f2yj6xq0kp476q7rf4ql"; depends=[geepack]; }; Metrics = derive2 { name="Metrics"; version="0.1.4"; sha256="0fh8qbjlwzagh272lgwr4bxcqcjb1qpz53mgs8rzlvncax6nk5bk"; depends=[]; }; - MetricsWeighted = derive2 { name="MetricsWeighted"; version="0.5.1"; sha256="0gv66ly2cchx6lf75sw4izpy2frdnzficb8xirdgj57h8cg5yppd"; depends=[]; }; + MetricsWeighted = derive2 { name="MetricsWeighted"; version="0.5.2"; sha256="17vcgixiappn7db2prd8aix6gg28zl4ncxvdp1cd8aypf320hq8h"; depends=[]; }; MfUSampler = derive2 { name="MfUSampler"; version="1.0.4"; sha256="0i5siq1jacxbfvakb97qnj3h7pk471rrx8ckwm0d8nl3j586s36y"; depends=[ars coda HI]; }; MiDA = derive2 { name="MiDA"; version="0.1.2"; sha256="144gxsxqljzskxsw5k0y69ix0pxlfvyyznxkjpf2ng4l47pg11z5"; depends=[caret gbm genefilter limma preprocessCore pROC SQN]; }; - MiRAnorm = derive2 { name="MiRAnorm"; version="1.0.0"; sha256="154wv0j82xyc4y5cd2czh0q8kzhgrk6qsn0ahc1zn3fnrzc9fgz0"; depends=[ArgumentCheck cluster dendextend ggplot2 MASS npmv plyr reshape2]; }; - MiRKAT = derive2 { name="MiRKAT"; version="1.1.1"; sha256="0qzfqc26ryngr1iar96a36z4skph7ddjq0nxbbznxhrz6kihyqzi"; depends=[CompQuadForm GUniFrac lme4 MASS Matrix mixtools PearsonDS permute quantreg survival]; }; - MiRNAQCD = derive2 { name="MiRNAQCD"; version="1.1"; sha256="0bxzgk1jiw5jdl39pqm63bggpf7bsav6pj2nyyi59sshbrk7c104"; depends=[ggplot2 pROC]; }; + MiRAnorm = derive2 { name="MiRAnorm"; version="1.0.0"; sha256="154wv0j82xyc4y5cd2czh0q8kzhgrk6qsn0ahc1zn3fnrzc9fgz0"; depends=[cluster dendextend ggplot2 MASS npmv plyr reshape2]; }; + MiRKAT = derive2 { name="MiRKAT"; version="1.1.2"; sha256="0r73ckbmva3zbsvqyak5c1wkchl7i34jx6rq8x32pw87xhv1zc5h"; depends=[CompQuadForm GUniFrac lme4 MASS Matrix mixtools PearsonDS permute quantreg survival]; }; + MiRNAQCD = derive2 { name="MiRNAQCD"; version="1.1.1"; sha256="06sqqkyxlz3axq4nb9xwa2049fd6jkl5yiqv3wll8aw3m8q8jdix"; depends=[ggplot2 pROC]; }; MiRSEA = derive2 { name="MiRSEA"; version="1.1"; sha256="0jpl6ws5yx1qjzdnip9a37nmvx81az4cbsjm57x613qjpwmg6by3"; depends=[]; }; MiSPU = derive2 { name="MiSPU"; version="1.0"; sha256="1l6q0fm5z5i6gigr940h8kc5rka08psmhcprp8grmsxk3qy2kply"; depends=[ape aSPU cluster Rcpp RcppArmadillo vegan]; }; MiST = derive2 { name="MiST"; version="1.0"; sha256="0gqln792gixqfh201xciaygmxbafa0wyv5gpbg9w5zkbbv44wrfk"; depends=[CompQuadForm]; }; @@ -2768,6 +2854,7 @@ in with self; { MicroMacroMultilevel = derive2 { name="MicroMacroMultilevel"; version="0.4.0"; sha256="1q5cyqr4hdl1wp2isk6p4p084i83kg6hd406wdp1nj9lv5i0xvgw"; depends=[]; }; MicroNiche = derive2 { name="MicroNiche"; version="1.0.0"; sha256="166ci4crkwnnh05rhs5hyrljgm4cdf7gp0ff8kjxjmd60byw80mz"; depends=[ggplot2 reshape2]; }; MicroSEC = derive2 { name="MicroSEC"; version="1.1.3"; sha256="1imdxm15f792xw5kc9lhry5jsw739j6y3f2fs64abj22hqxfwypi"; depends=[BiocGenerics Biostrings data_table dplyr GenomeInfoDb GenomicAlignments gtools magrittr openxlsx R_utils Rsamtools stringr tidyr]; }; + Microsoft365R = derive2 { name="Microsoft365R"; version="2.1.0"; sha256="01rn59lcrr1bjd6cmd344wn7z1h18m3h4918clv6fy28gs5qvgq1"; depends=[AzureAuth AzureGraph curl httr jsonlite mime R6 vctrs]; }; MinBAR = derive2 { name="MinBAR"; version="1.1.2"; sha256="099afazil0gfs5yq92clc7ahis5azyvlql4zs7fhp82v9m6b80qj"; depends=[dismo ecospat geosphere lattice latticeExtra maxnet raster rgdal sp]; }; MinEDfind = derive2 { name="MinEDfind"; version="0.1.3"; sha256="1y0iv92mp7hf14vrj54qd0yvmjrv52jv3vg25kc5q7pml63njkqa"; depends=[ggplot2 gridExtra Iso]; }; MindOnStats = derive2 { name="MindOnStats"; version="0.11"; sha256="13995v4n0hfb53w02jk81pl7nazkvqwwv87y1sr99jr9ppzc08mz"; depends=[]; }; @@ -2783,36 +2870,39 @@ in with self; { MixRF = derive2 { name="MixRF"; version="1.0"; sha256="1av1wx7wmfc3z8a4bc6g3i3b807nc28n3s2rs3yh0rcwq1pfl0ir"; depends=[doParallel foreach lme4 randomForest]; }; MixSAL = derive2 { name="MixSAL"; version="1.0"; sha256="15dymyzfs3bwskaf6xndj291g6nhw7k1q93y1cba55a6fdjh5qz9"; depends=[MASS]; }; MixSIAR = derive2 { name="MixSIAR"; version="3.1.12"; sha256="07wiv7x2c9mhqk37zndxvdb76m9shizc48qz2bp2f4g5z9hciid7"; depends=[bayesplot coda ggmcmc ggplot2 lattice loo MASS MCMCpack R2jags RColorBrewer reshape reshape2 splancs]; }; - MixSim = derive2 { name="MixSim"; version="1.1-3"; sha256="1mrzbax2inpmhxz26zlybci6ks5q780f10vcy1za638dmkz16fnv"; depends=[MASS]; }; + MixSim = derive2 { name="MixSim"; version="1.1-4"; sha256="0nwgp2pmyza3l77y6div9fkdw6w3m8dbl28crv9yhdc9rpw1xlfp"; depends=[MASS]; }; + MixTwice = derive2 { name="MixTwice"; version="1.1"; sha256="1vzy31aaxyfr28xsk9358laqg429lnrkxdmm63maz15wcbxha9zq"; depends=[alabama ashr fdrtool]; }; MixedPoisson = derive2 { name="MixedPoisson"; version="2.0"; sha256="0g5mpzj0wda6g46q3cg5mm3x4dvpz9gdclzn2m17l62lzny2i10p"; depends=[gaussquad MASS Rmpfr]; }; MixedPsy = derive2 { name="MixedPsy"; version="1.0.0"; sha256="19cgw82jdkcpkca90bab1k5gcb2prlxm634n4m7yx0p0mj736fha"; depends=[beepr boot brglm lme4 Matrix mnormt]; }; MixedTS = derive2 { name="MixedTS"; version="1.0.4"; sha256="0gwcg115idbcm5llgzqsygvqgshq8dywawxkaddsmw4sbbhj4555"; depends=[MASS]; }; - MixfMRI = derive2 { name="MixfMRI"; version="0.1-0"; sha256="08k8j52mrjpcrnwz74va4w3cdfrbkzp00wdzrrrzifx7lcmxrqzv"; depends=[EMCluster fftw MASS Matrix MixSim RColorBrewer]; }; + MixfMRI = derive2 { name="MixfMRI"; version="0.1-1"; sha256="0nqsvfr28m510gqwcv0s2b94k42m7m6s7ffsjxn6kxikh5p3y6gz"; depends=[EMCluster fftw MASS Matrix MixSim RColorBrewer]; }; MixtureInf = derive2 { name="MixtureInf"; version="1.1"; sha256="12qcflmrpzh4w5b40xq5qicks6p0cwqpf5k84pwabkjb168afddv"; depends=[quadprog]; }; MixtureRegLTIC = derive2 { name="MixtureRegLTIC"; version="1.0.0"; sha256="052gyk4gqv49fa2rxbxnib29f1vjxiw4q8llkfhsv8kw5pw38699"; depends=[]; }; MoBPS = derive2 { name="MoBPS"; version="1.4.87"; sha256="0wzmb02d9b49jrz8a4z28yri2zd8dh016an46h2dkmykr1asxg95"; depends=[]; }; - MoEClust = derive2 { name="MoEClust"; version="1.3.2"; sha256="1mmhf5pl2c9x2fvpq1jj5q3ifj6xgs8f1fsdqs7qvhbwxk3bk0hc"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; }; + MoEClust = derive2 { name="MoEClust"; version="1.3.3"; sha256="0hi2ilh1ripjlf6kqajphzjywhy8shahvfhv7c2hngms8lw5ggs9"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; }; MoLE = derive2 { name="MoLE"; version="1.0.1"; sha256="0bq19vwqjn5hl4mw5imkydbp39gal992vnh2dwrq8bb8cmj3qh91"; depends=[]; }; - MoMPCA = derive2 { name="MoMPCA"; version="1.0.0"; sha256="049byaiwxl3h05pvwv9jj94g7dk2nrnba7qgx76hwwfbamvk6n5x"; depends=[doParallel dplyr foreach magrittr Matrix slam tm topicmodels]; }; + MoMPCA = derive2 { name="MoMPCA"; version="1.0.1"; sha256="1snixlq35xbzf005d877i493sf1wm48jqlq9515yl1s6lxmav1n7"; depends=[doParallel dplyr foreach magrittr Matrix slam tm topicmodels]; }; MoTBFs = derive2 { name="MoTBFs"; version="1.4"; sha256="1b69wzsy0wnzgbk04x363wb1dfnxz610sn8d28cn2akvf7n8na70"; depends=[bnlearn ggm lpSolve Matrix quadprog]; }; MobileTrigger = derive2 { name="MobileTrigger"; version="0.0.31"; sha256="1zbnxdxh6gr4sgpi10i0pnd85f7i842105jgjswacziqamby6mcy"; depends=[caret ggplot2 kableExtra knitr mailR plyr XML yaml]; }; - ModStatR = derive2 { name="ModStatR"; version="1.3.0"; sha256="1wdqkvbycjk4wzzkpc0pyxvxrzqm48xbi8y87nax5l1v5qdfm1n0"; depends=[BioStatR boot ellipse ggplot2 gsl hypergeo jmuOutlier]; }; + ModStatR = derive2 { name="ModStatR"; version="1.3.1"; sha256="16mfggplpmjz2kspfa99q4gbm4avm306d83n8hiki382094li1ni"; depends=[boot ellipse gsl hypergeo jmuOutlier]; }; Modalclust = derive2 { name="Modalclust"; version="0.7"; sha256="0ymzdxp6rh6baih1xm6kj8l8jxjclvnmq0gfp38cl8lpskspb26x"; depends=[class mvtnorm zoo]; }; ModelGood = derive2 { name="ModelGood"; version="1.0.9"; sha256="1y99a7bgwx167pncxj00lbw3cdjj23fhhzl8r24hwnhxr984kvzl"; depends=[prodlim]; }; ModelMap = derive2 { name="ModelMap"; version="3.4.0.1"; sha256="1279k5hznxrb6fq4zd1baw1pm5dj5437g5awkgb8kp7ll8raa2ql"; depends=[corrplot fields HandTill2001 mgcv PresenceAbsence randomForest raster rgdal]; }; ModelMetrics = derive2 { name="ModelMetrics"; version="1.2.2.2"; sha256="0mrlsw4c5y1vdsqynxr2dcvmhh5h37pnd71jw5a5djpbda9g21jy"; depends=[data_table Rcpp]; }; Modelcharts = derive2 { name="Modelcharts"; version="0.1.0"; sha256="1jy78kyyh4r13px2d5bm7fra5bkcpimzfji0hmydspkfi3qla37x"; depends=[dplyr plotly]; }; Modeler = derive2 { name="Modeler"; version="3.4.5"; sha256="15gbg5568qj81wp6yy31amb2b7wl1wvlmgpmdp29lvz1p33jx2y1"; depends=[class ClassComparison ClassDiscovery e1071 neuralnet nnet oompaBase randomForest rpart TailRank]; }; + MolgenisArmadillo = derive2 { name="MolgenisArmadillo"; version="1.0.1"; sha256="0dps7swqsh8dqfadgbx7x6vyiv50pvyzdiqqfnqs4jzfj62fb6qx"; depends=[arrow aws_iam aws_s3 httr MolgenisAuth urltools xml2]; }; MolgenisAuth = derive2 { name="MolgenisAuth"; version="0.0.14"; sha256="0b9k1l66v30hcblbw9m3ylscx8fd4i51d8iggmm0l0gclnkbs5df"; depends=[httr urltools]; }; - MomTrunc = derive2 { name="MomTrunc"; version="5.91"; sha256="055llc2q32vybk16bkpy9x6na2asrjjhg2d9j489jdv9cn3n5w9s"; depends=[hypergeo mvtnorm Rcpp RcppArmadillo tlrmvnmvt]; }; + MomTrunc = derive2 { name="MomTrunc"; version="5.97"; sha256="1rgynsx4nh09pzm1klk648xg45xicx03xik1q01nbqhx9m9v9j6d"; depends=[hypergeo mvtnorm Rcpp RcppArmadillo tlrmvnmvt]; }; Momocs = derive2 { name="Momocs"; version="1.3.2"; sha256="1rjfq4vp5n8352v9yqaflcrzj3ysanzbacvx0qzj5k50my7grnhg"; depends=[cluster dendextend dplyr geometry geomorph ggplot2 jpeg magrittr MASS progress RColorBrewer rgeos sp tibble vegan]; }; Mondrian = derive2 { name="Mondrian"; version="1.1.0"; sha256="1x40cdry6dwixwqx10kv42xr4254kj1f17va186haw9m949xn5gd"; depends=[RColorBrewer]; }; MonetDB_R = derive2 { name="MonetDB.R"; version="2.0.0"; sha256="0b5flc9l4nshy2fmwxbzcsn7pdivwy3x6kic94ppyyiqzz41h0b1"; depends=[codetools DBI digest testthat]; }; MonoInc = derive2 { name="MonoInc"; version="1.1"; sha256="14rykw3bfj0vznz0rw4vsg1k4vanfv9cy867vspw966ncl4bw70h"; depends=[compare doParallel foreach iterators sitar]; }; + MonoPhy = derive2 { name="MonoPhy"; version="1.3"; sha256="184nvwmxi28awq8fj1q0mliilbd4kaag673jydr47q1acql0dnmb"; depends=[ape phangorn phytools RColorBrewer taxize]; }; MonoPoly = derive2 { name="MonoPoly"; version="0.3-10"; sha256="0ls3sjfkinp9c5002ww0xm4l2galf20w2f45nm5irkk9sbqas0jq"; depends=[quadprog]; }; Monte_Carlo_se = derive2 { name="Monte.Carlo.se"; version="0.1.0"; sha256="1d5gp4wvpvrlp82g8k8v668mzhmdlk2pvky34v7hxysap9xgmsqr"; depends=[]; }; MonteCarlo = derive2 { name="MonteCarlo"; version="1.0.6"; sha256="1jwq3by8zfy6sbzahcj5l0vicqn7yyqpb7xhfsaymfspm7xyq6pj"; depends=[abind codetools reshape rlecuyer snow snowfall]; }; - MonteCarloSEM = derive2 { name="MonteCarloSEM"; version="0.0.1"; sha256="0r6slgm7ka0flpzw0gzrdgjs27sf9757jbx2jsh5fjqfndzsz12j"; depends=[lavaan Matrix]; }; + MonteCarloSEM = derive2 { name="MonteCarloSEM"; version="0.0.2"; sha256="01vxldhf8v40s4h0ry6a2hgvr74mf5qdnijd22cz7rivr30ldf4h"; depends=[lavaan Matrix]; }; Morpho = derive2 { name="Morpho"; version="2.8"; sha256="080ix1j0r67l0y66zq4xzfl8lhd3q4y4hzmmxphxkhmx83rhsik0"; depends=[colorRamps doParallel foreach MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; }; MorseGen = derive2 { name="MorseGen"; version="1.2"; sha256="1kq35n00ky70zmxb20g4mwx0hn8c5g1hw3csmd5n6892mbrri8s9"; depends=[]; }; MortCast = derive2 { name="MortCast"; version="2.3-0"; sha256="0jdfmwz2yd81dz8ks9f79wz5az6j59skvf3cp1rv2122bg5wl7n2"; depends=[wpp2017]; }; @@ -2821,28 +2911,31 @@ in with self; { MortalityTables = derive2 { name="MortalityTables"; version="2.0.2"; sha256="1i2qgk772qyp9mcsrrv7cjwr6afw0fjid26073c1gi1rssifhvib"; depends=[ggplot2 pracma scales]; }; MplusAutomation = derive2 { name="MplusAutomation"; version="0.8"; sha256="08k8c4h17k21g9gxj2hwg59dyny7j80kjk7086rgwq9lhqf022y9"; depends=[boot coda data_table digest ggplot2 gsubfn lattice pander plyr rlang texreg xtable]; }; MplusTrees = derive2 { name="MplusTrees"; version="0.1.1"; sha256="1s119p1fgr27rkh671zpzbfnd368m0s1607r8xwgjm0y5ncxwkv7"; depends=[MplusAutomation nlme rpart rpart_plot]; }; - Mqrcm = derive2 { name="Mqrcm"; version="1.1"; sha256="15pxrh5i8pm6ckp44mlgq1ld5b1y9kg6vjvis5k812h64gm3aizq"; depends=[Hmisc pch]; }; + Mqrcm = derive2 { name="Mqrcm"; version="1.2"; sha256="1alfv76b90frimihjcq8whzqkwvhnnw2fd92nrfpnfj5dw0b56f5"; depends=[Hmisc pch]; }; MrSGUIDE = derive2 { name="MrSGUIDE"; version="0.1.2"; sha256="1hd0lvvy12r6kxa64vwnjavyv2f7a9jqgjxgmlw86wwh5g09hvfd"; depends=[BH magrittr Rcpp RcppArmadillo yaml]; }; MsdeParEst = derive2 { name="MsdeParEst"; version="1.7"; sha256="1zhi1jr30sl7jpsw37lc3akfzixlhm9k2hjkha1pjy5fmd5lddlx"; depends=[MASS moments mvtnorm sde]; }; - MtreeRing = derive2 { name="MtreeRing"; version="1.4.2"; sha256="097w65ijhdkag26z39kzqqp7bs3bcx4iqapj3qc8inh0iynhnxp6"; depends=[bmp dplR dplyr imager jpeg magick magrittr measuRing png shiny shinydashboard shinyWidgets spatstat tiff]; }; + MtreeRing = derive2 { name="MtreeRing"; version="1.4.5"; sha256="1i6ljz950n9fpgci9b5777dg3b88ihhz8jvyw621hg218imswhxz"; depends=[bmp dplR dplyr imager jpeg magick magrittr measuRing png shiny shinydashboard shinyWidgets spatstat_geom tiff]; }; MuChPoint = derive2 { name="MuChPoint"; version="0.6.1"; sha256="15bqsc7bsjg55qxjwxh58bxbwz61a6wv4xxph994g4020b98l01x"; depends=[capushe Matrix Rcpp shiny]; }; MuFiCokriging = derive2 { name="MuFiCokriging"; version="1.2"; sha256="09p8wdmlsf21ibqyjigwdipcin3ij0naxcd035hqgfj76v20wiyv"; depends=[DiceKriging]; }; MuMIn = derive2 { name="MuMIn"; version="1.43.17"; sha256="1ac78wg94j37ikwb8r1lxk6jlj3m804q94630i5vcm663p99cqdc"; depends=[Matrix nlme]; }; MuViCP = derive2 { name="MuViCP"; version="1.3.2"; sha256="1wkiwdz4bblxf1zr57khljqkga9ks9aj1lnidvmhib94q6b8fnf4"; depends=[gtools MASS sm]; }; MullerPlot = derive2 { name="MullerPlot"; version="0.1.2"; sha256="0am5brdmbh2mw74fbw9nha6h4qlhj8psg3142mql1ad99bd0zg4w"; depends=[RColorBrewer]; }; MultAlloc = derive2 { name="MultAlloc"; version="1.2"; sha256="0c3sqfaa08s8mk4yz77kh6q6v9ic5xp52g9prfw1k2kv4nw1k2qd"; depends=[Rglpk]; }; + MultBiplotR = derive2 { name="MultBiplotR"; version="1.3.30"; sha256="0cnn8m4yd2w0izbsvrlqgxif41554nq3hj7m169lxwxrb0csybcf"; depends=[car dae deldir dunn_test geometry GPArotation gplots Hmisc lattice MASS mirt mvtnorm optimr polycor rgl scales xtable]; }; MultEq = derive2 { name="MultEq"; version="2.3"; sha256="0fshv7i97q8j7vzkxrv6f20kpqr1kp9v6pbw50g86h37l0jghj7r"; depends=[]; }; MultNonParam = derive2 { name="MultNonParam"; version="1.3.4"; sha256="06cdhm63d8drkx63q6wxq5kgny29ly5547apjaxj08b2dkmfrm4d"; depends=[ICSNP]; }; + MultOrdRS = derive2 { name="MultOrdRS"; version="0.1-2"; sha256="0bra4z37njkcgah3a1k6mxcnmxq85188jywhgx3fdb1wnv5ic549"; depends=[Rcpp RcppArmadillo statmod]; }; MultiBD = derive2 { name="MultiBD"; version="0.2.0"; sha256="1qjfr8hx8sr5m8370yzi09r8jnh3i6907wzj3v4h83vmjh81db71"; depends=[BH Rcpp RcppParallel]; }; MultiCNVDetect = derive2 { name="MultiCNVDetect"; version="0.1-1"; sha256="0mfisblw3skm4y8phfg4wa0rdchl01wccarsq79hv63y78pfhh13"; depends=[]; }; MultiFit = derive2 { name="MultiFit"; version="1.0.1"; sha256="1hy2xsmdcsn4jwa06ffymhhd4prxjnqw0jxl77sxq8yb1fc2vk64"; depends=[data_table Rcpp RcppArmadillo]; }; MultiGHQuad = derive2 { name="MultiGHQuad"; version="1.2.0"; sha256="00prkn5awxrh365j1jz312har1x4p8v52a0sqfy00pqr44ncmqqq"; depends=[fastGHQuad Matrix mvtnorm]; }; + MultiHorizonSPA = derive2 { name="MultiHorizonSPA"; version="1.0.0"; sha256="04361yz2l3zwg30m5i3zd6lsclxis9shy9hi17x4s62hskjav12h"; depends=[matlab]; }; MultiJoin = derive2 { name="MultiJoin"; version="0.1.1"; sha256="0cfk6yc5jagj9y8xybw6yg0yph4zah2vzaxv0384ad6r0r3x3nm8"; depends=[]; }; MultiKink = derive2 { name="MultiKink"; version="0.1.0"; sha256="0vi629mjmyrh03g3kx4vl47s52bggdxbq2wrdcf892g7xasbmv2b"; depends=[MASS quantreg]; }; MultiLCIRT = derive2 { name="MultiLCIRT"; version="2.11"; sha256="1qls0qp5fz377h50lvpzq3vkw49i3nvizli98gss50nqci8ssqm4"; depends=[limSolve MASS]; }; - MultiOrd = derive2 { name="MultiOrd"; version="2.4.2"; sha256="1g2jcj5sgyv3ap3a0izwi7ad88ssp7vqk1a86brvcas5qzqkjxl0"; depends=[corpcor Matrix mvtnorm psych]; }; + MultiOrd = derive2 { name="MultiOrd"; version="2.4.3"; sha256="1fmp8979ibxrx43vhi6dncljpbc1388y915d4g0gnl6a7z8g1dnh"; depends=[corpcor Matrix mvtnorm psych]; }; MultiPhen = derive2 { name="MultiPhen"; version="2.0.3"; sha256="0razswg4wqsz4q0dvpxp3swmxk82ig8gkyi4vcmxh11nlhb258w3"; depends=[abind epitools HardyWeinberg MASS meta RColorBrewer]; }; - MultiRNG = derive2 { name="MultiRNG"; version="1.2.3"; sha256="12nspgk3iy698bik040mlxslysf6j9c9vww5bclsdm81ckymd0ca"; depends=[]; }; + MultiRNG = derive2 { name="MultiRNG"; version="1.2.4"; sha256="189b2n5fy4sl63xifhlk88kahkn0qkh9szrkmzlq40vrwsbfximn"; depends=[]; }; MultiRR = derive2 { name="MultiRR"; version="1.1"; sha256="1jrhx3nlqwsv3i6r8fs142llw88qad41rsh0sj1pv1gb928zpvl3"; depends=[lme4 MASS]; }; MultiRobust = derive2 { name="MultiRobust"; version="1.0.5"; sha256="15l23a2mkpcxc3y93f761c5fwcj5h13yma4qdfdlr8fiqkvc3acg"; depends=[]; }; MultiSV = derive2 { name="MultiSV"; version="0.0-67"; sha256="0924lvkx12aqjxxz8bwqdi4h9xc2acf8aynllx0m45ip5r4gh1g2"; depends=[nlme reshape]; }; @@ -2861,9 +2954,11 @@ in with self; { Myrrixjars = derive2 { name="Myrrixjars"; version="1.0-2"; sha256="1hhfg83z5kl6l250z3lippx3qc68k1wj1qlfzd6m66rgmk699gyl"; depends=[rJava]; }; N2H4 = derive2 { name="N2H4"; version="0.5.7"; sha256="0wpwcv17jvrjgvr0qhjrjr1i2rdxcga49c1c6m7s58p9wmdi8fg2"; depends=[dplyr httr jsonlite lubridate rvest tibble tidyr xml2]; }; N2R = derive2 { name="N2R"; version="0.1.1"; sha256="1wjz145d5v1ml2zyvw2znvv550sn6cm7c3rdshg450f7c4j7qyp8"; depends=[Matrix Rcpp RcppEigen RcppSpdlog]; }; - NACHO = derive2 { name="NACHO"; version="1.0.1"; sha256="14xifjfrrpf7mwjqzk9vqnd6hhxf4xm558j7hspjsr5gg0nq6ps6"; depends=[cli crayon dplyr ggbeeswarm ggforce ggplot2 ggrepel knitr magrittr purrr rlang rmarkdown rstudioapi scales sessioninfo shiny shinyWidgets tibble tidyr]; }; + NACHO = derive2 { name="NACHO"; version="1.1.0"; sha256="0ji9kcfbnsrn6h4p0y0ly5nwyfwh3y01wm80a7syg4mjj0nd4z0g"; depends=[cli crayon dplyr ggbeeswarm ggforce ggplot2 ggrepel knitr magrittr purrr rlang rmarkdown rstudioapi scales sessioninfo shiny shinyWidgets tibble tidyr]; }; NADA = derive2 { name="NADA"; version="1.6-1.1"; sha256="0jp4mqr77cx7q5lff84s6wb0dwjy9mi0jyhbjc5fsx50bdczc3v7"; depends=[survival]; }; - NADIA = derive2 { name="NADIA"; version="0.4.0"; sha256="09ykmvk72j78ypcgfdiwknik83pk3wn1mvlhsvlj227rff16hj2x"; depends=[Amelia data_table doParallel foreach glmnet mice missForest missMDA missRanger mlr3 mlr3learners mlr3pipelines paradox softImpute testthat VIM]; }; + NADA2 = derive2 { name="NADA2"; version="1.0.1"; sha256="01x3ylrp3kizq9aa0wyaj4jbyr4si2vi8rc3b8r0bllnsl2ia2ix"; depends=[cenGAM coin EnvStats fitdistrplus Kendall mgcv multcomp NADA perm survival survminer vegan]; }; + NADIA = derive2 { name="NADIA"; version="0.4.1"; sha256="11ijx9zs9r7s83mjhr7j6wrhz03mhwcrfsl4km6izmm36qa2vslm"; depends=[Amelia data_table doParallel foreach glmnet mice missForest missMDA missRanger mlr3 mlr3learners mlr3pipelines paradox softImpute testthat VIM]; }; + NAEPirtparams = derive2 { name="NAEPirtparams"; version="1.0.0"; sha256="0qhfmkhi38z27ky3xbkvra5r6lw3kj9p3xrblm9j2657rj9kxc9j"; depends=[]; }; NAEPprimer = derive2 { name="NAEPprimer"; version="1.0.1"; sha256="19p1livdnayfcl88f8r9x1vg30x522q8lgx66pfgwpkxjzvrqa2l"; depends=[]; }; NAM = derive2 { name="NAM"; version="1.7.3"; sha256="12d2yjl0af2ailvwk30fswalx1wzyj500qbrhiczsg1vr4rcqhkh"; depends=[Rcpp]; }; NB = derive2 { name="NB"; version="0.9"; sha256="1gh42z7lp6g09fsfmikxqzyvqp2874cx3a6vr96w43jfwmgi2diq"; depends=[]; }; @@ -2878,16 +2973,18 @@ in with self; { NBShiny = derive2 { name="NBShiny"; version="0.1.0"; sha256="0hcmdhj26hc3c8d5nb6yb7amv0rbdxywima0l0jqkxipx56idlcx"; depends=[caret dplyr e1071 rhandsontable rmarkdown shiny]; }; NBShiny2 = derive2 { name="NBShiny2"; version="0.1.0"; sha256="0w4f19av8zl220zq3flmlqn86ivikclnsnkd7bc1wafhr12hmygp"; depends=[caret dplyr e1071 rhandsontable rmarkdown shiny]; }; NBShiny3 = derive2 { name="NBShiny3"; version="0.1.0"; sha256="1p0n4jpzdaqwpidxairwpgc8qrdvr1r7cammpgnzc6a9ar2hcw1g"; depends=[caret dplyr e1071 rhandsontable rmarkdown shiny]; }; - NCA = derive2 { name="NCA"; version="3.0.3"; sha256="0lijpxm3iy15nadcsclqlslflnkh5jrw6nm65jyzl89ykxl2ddl5"; depends=[doParallel foreach ggplot2 gplots iterators KernSmooth lpSolve quantreg sfa]; }; + NCA = derive2 { name="NCA"; version="3.1.1"; sha256="11ky58kydmy9jrw33mzhi65wxd60wn5zvp77ml10zms78v7yvl04"; depends=[doParallel foreach ggplot2 gplots iterators KernSmooth lpSolve plotly quantreg sfa]; }; NCSCopula = derive2 { name="NCSCopula"; version="1.0.1"; sha256="0amxp9daqp9bhz61hrq1dk88ai5xfd5sp3538rf3xwgs6walycr4"; depends=[copula]; }; NCSampling = derive2 { name="NCSampling"; version="1.0"; sha256="0bv93xffnzvbip86b3pg7apxzh3410mxff77q119m0z7f6vm3fam"; depends=[lattice randomForest yaImpute]; }; NCmisc = derive2 { name="NCmisc"; version="1.1.6"; sha256="0ycc7b7z26a922hdjq8p4hjljjh09il24h3023k248pcsnbmka1a"; depends=[proftools]; }; NCutYX = derive2 { name="NCutYX"; version="0.1.0"; sha256="0r2ghnvrbya3p1d8rb5bsnz5v852vvc6rq65yafn2xzr7886wrg2"; depends=[fields glmnet MASS mvtnorm Rcpp RcppEigen]; }; NDP = derive2 { name="NDP"; version="0.1.0"; sha256="0wmld7g4w3d7d8lyj4132h3jpr8ng8kpy4ssqjp8r0lqwif2i86b"; depends=[rmarkdown shiny]; }; + NEONiso = derive2 { name="NEONiso"; version="0.4.0"; sha256="05azg9nh3mpfm490m3x7bv57h2zh3wa2k2cjdcfz1m6bjh6gs4fs"; depends=[data_table downloader dplyr httr jsonlite lubridate magrittr neonUtilities R_utils rhdf5 rlang tidyselect zoo]; }; NEff = derive2 { name="NEff"; version="1.1"; sha256="16ys1fi28kbzg3am9vz1c5pc9x0ac47pl6za04h63lspk99yplzk"; depends=[bit msm]; }; NEpiC = derive2 { name="NEpiC"; version="1.0.1"; sha256="11zf112xcsg3k93vks2fnsflw2v2d56a0bsjpd460d21k3gipfz8"; depends=[igraph PairedData]; }; - NFLSimulatoR = derive2 { name="NFLSimulatoR"; version="0.2.1"; sha256="18rq5h1lwdkywr035gasm2gyvc0nlnq5i4m892rp29xwh7avy6kc"; depends=[data_table progress]; }; - NFP = derive2 { name="NFP"; version="0.99.3"; sha256="18alq3nb47jyz0dh54y536a0igkfbh2x5nf2jxryfnizr47qc3a5"; depends=[apcluster dplyr ggplot2 graph igraph KEGGgraph magrittr plyr stringr tidyr]; }; + NFCP = derive2 { name="NFCP"; version="1.0.0"; sha256="0mirpfywydqg6p664vndz9i6m2igwwyshg0whs7cwcg1bmwnci5v"; depends=[curl FKF_SP LSMRealOptions MASS mathjaxr numDeriv Rdpack rgenoud]; }; + NFLSimulatoR = derive2 { name="NFLSimulatoR"; version="0.3.0"; sha256="0gmr47pzyys3d4kmmbxznhs3vsi83vb6xv16bhg0zljkdp80fp44"; depends=[data_table progress]; }; + NFP = derive2 { name="NFP"; version="0.99.4"; sha256="1ybkkqdwq72inwyak5d2598xizfph5sg3zzb855l0kpxplcqnp2f"; depends=[apcluster dplyr ggplot2 graph igraph KEGGgraph magrittr plyr stringr tidyr]; }; NFWdist = derive2 { name="NFWdist"; version="0.1.0"; sha256="0833lg0pd763awrc6ibidwf2ldl79w9lmm5acq4bnpd2hzsx60l8"; depends=[]; }; NGBVS = derive2 { name="NGBVS"; version="0.2.0"; sha256="1k7m7wy54irqci6ccclpylbmz0613ha7r531cji99jb7nkpzl6l0"; depends=[Rfast]; }; NGSSEML = derive2 { name="NGSSEML"; version="2.1"; sha256="0fjpq1nqqh4wbi2xzybz07x48d1nmwm25n93gj7znf7dm8qanxqs"; depends=[car dlm fields interp mvtnorm]; }; @@ -2896,48 +2993,47 @@ in with self; { NHMM = derive2 { name="NHMM"; version="3.11"; sha256="1ynxk4dpllb3w8229dmxzjdmf0zh5cgmh3wa55d02disc6yhm77k"; depends=[BayesLogit MASS MCMCpack msm Rcpp]; }; NHMSAR = derive2 { name="NHMSAR"; version="1.17"; sha256="149zzk8apl4zv60xagl8zk3zv1fnrbfijmlwn8c4vypvlfdsr981"; depends=[glasso lars ncvreg ucminf]; }; NHPoisson = derive2 { name="NHPoisson"; version="3.3"; sha256="1i6n59ckcxk1hwyz97jmnv4yb96ianjma6ka8lpz79ivs41jniad"; depends=[car]; }; - NHSRdatasets = derive2 { name="NHSRdatasets"; version="0.2.0"; sha256="00pcnhmp8i8hqghfm6wrx5zxpv8rz4j6vmxj8f1mg0n85qg08cfd"; depends=[tibble]; }; + NHSRdatasets = derive2 { name="NHSRdatasets"; version="0.3.0"; sha256="1l4zrprnb3fsb2mibq8749a15xbvhn1g5yajbjf7gls81c8f2r7p"; depends=[tibble]; }; NIPTeR = derive2 { name="NIPTeR"; version="1.0.2"; sha256="0ll6amqyw33a93xiccihidrnbaqlx1q7kqcd4wks7cvqawd8pgv1"; depends=[Rsamtools S4Vectors sets]; }; NIRStat = derive2 { name="NIRStat"; version="1.1"; sha256="07l4ca7d9q840iy5a80sqafrlv20534jw65wzxs90j2d0jx4acs9"; depends=[ggplot2 gridExtra mgcv]; }; NISTnls = derive2 { name="NISTnls"; version="0.9-13"; sha256="03a1c8a5dr5l5x4wbclnsh3vmx3dy7migfdzdx7d7p3s7hj3ibif"; depends=[]; }; NISTunits = derive2 { name="NISTunits"; version="1.0.1"; sha256="0km9l3k9p35sb1qrhrz4ijjsdihvsp6j7cz5kh46lgf7nn6xdk7a"; depends=[]; }; NITPicker = derive2 { name="NITPicker"; version="1.0.1"; sha256="00jmin7y1bp7a4a1qcvv3rkgiy9qij7gbkxcdgpiyzcs6aaif59z"; depends=[fda fda_usc fdasrvf]; }; - NLMR = derive2 { name="NLMR"; version="1.0"; sha256="0i5whvr42mizkv37fa4am81sfq58fsz9rnrhjlig4id9nddm6m9x"; depends=[checkmate dplyr fasterize RandomFields raster Rcpp sf spatstat tibble]; }; NLP = derive2 { name="NLP"; version="0.2-1"; sha256="1dpj04fmld2lnhg072ahgjbhmciqqy9h1lrz0wf32mr7mm9s9sh5"; depends=[]; }; NLPclient = derive2 { name="NLPclient"; version="1.0"; sha256="0jhlz9mqziyk5574vl8qjjs4g75x27rlk90wvzm3q9kjrjyvad35"; depends=[curl NLP xml2]; }; NLPutils = derive2 { name="NLPutils"; version="0.0-5"; sha256="1jxxly85iajzb9qckkkar0przyxv005cyvry0qi5dkzhbyl5k490"; depends=[NLP qdap SnowballC]; }; NLRoot = derive2 { name="NLRoot"; version="1.0"; sha256="1x8mcdgqqrhyykr12bv4hl4wbh1zw2qgpnd2yrm68kb92iy95rh4"; depends=[]; }; NMADiagT = derive2 { name="NMADiagT"; version="0.1.2"; sha256="0fskc3ldfdl17gazpfr2hixy79n7db4c1f5yl1jalhwxiabnxjwp"; depends=[coda ggplot2 imguR ks MASS MCMCpack plotrix Rdpack reshape2 rjags]; }; - NMAoutlier = derive2 { name="NMAoutlier"; version="0.1.13"; sha256="0d3mg92ky5mhjz6y1903ssanl1lzq4q22yifgjyq29j9snx0jkx1"; depends=[ggplot2 gridExtra MASS netmeta reshape2]; }; + NMAoutlier = derive2 { name="NMAoutlier"; version="0.1.17"; sha256="04phcxm0ip2znbp779cy7qvbrs4i89iqivdqb7yj03v1j3b14rnc"; depends=[ggplot2 gridExtra MASS netmeta reshape2]; }; NMF = derive2 { name="NMF"; version="0.23.0"; sha256="0ls7q9yc9l1z10jphq5a11wkfgcxc3gm3sfjj376zx3vnc0wl30g"; depends=[Biobase BiocManager cluster colorspace digest doParallel foreach ggplot2 gridBase pkgmaker RColorBrewer registry reshape2 rngtools stringr]; }; NMFN = derive2 { name="NMFN"; version="2.0"; sha256="0n5fxqwyvy4c1lr0glilcz1nmwqdc9krkqgqh3nlyv23djby9np5"; depends=[]; }; NMI = derive2 { name="NMI"; version="2.0"; sha256="1rxphy9rhy9zhdiz48dvl9m26x6k681lnyn39lqxs0a6jhrxg7y3"; depends=[]; }; - NMOF = derive2 { name="NMOF"; version="2.2-2"; sha256="0hj6yb32s79a65192jk4i77780bmgms57xsxldwxgw13j3w74i76"; depends=[]; }; + NMOF = derive2 { name="NMOF"; version="2.4-1"; sha256="0jnzmzwscrxhnlgzwrcq69wx9viwidbysxjyxa93n0hn9abrp1ip"; depends=[]; }; NMVANOVA = derive2 { name="NMVANOVA"; version="1.1.0"; sha256="1jlqyg5vn7j8srvifjghd5a7820kadl8kbwib4qxalrfprq81h8p"; depends=[]; }; NNMIS = derive2 { name="NNMIS"; version="1.0.1"; sha256="1w2i4xlx249p589yqdgbx1ra406ycxw729vbk1lqadbn71m6blaz"; depends=[survival]; }; - NNS = derive2 { name="NNS"; version="0.5.6"; sha256="1whq73gl9s0h5nr380s0swv3479synvxbvlc2vsnzxq65nd5qhv1"; depends=[caret data_table doParallel dtw meboot Rfast rgl stringr tdigest]; }; + NNS = derive2 { name="NNS"; version="0.6.3.2"; sha256="18qy02lpjhwmg5pj1yxj8dx468vi99cgy86rvr55yan5jz2rz7yq"; depends=[caret data_table doParallel dtw dynlm meboot plyr Rfast rgl stringr tdigest]; }; NNTbiomarker = derive2 { name="NNTbiomarker"; version="0.29.11"; sha256="0sqlf7vzhpmq2g98c2qlrcqn3ba4ycfxbczgcjiqqhqsvgkpacc1"; depends=[magrittr mvbutils shiny stringr xtable]; }; - NNbenchmark = derive2 { name="NNbenchmark"; version="3.1.6"; sha256="188x3j339ljc7lg665x3zv0azdvdcd7h4wv2fdvwhwv2gzi887ry"; depends=[pkgload R6]; }; + NNbenchmark = derive2 { name="NNbenchmark"; version="3.1.9"; sha256="1aj9fnk6x8qn998szbn2wlimzs9fixf0pwbivhyz69xipljzcsmm"; depends=[pkgload R6]; }; NORMA = derive2 { name="NORMA"; version="0.1"; sha256="193q6dwn8v7k8xq0amjpvb3v6mn7c6agqa487gvjj78dy1qz720a"; depends=[rootSolve]; }; NORMT3 = derive2 { name="NORMT3"; version="1.0-3"; sha256="041s0qwmksy3c7j45n4hhqhq3rv2hncm2fi5srjpwf9fcj5wxypg"; depends=[]; }; - NPBayesImputeCat = derive2 { name="NPBayesImputeCat"; version="0.2"; sha256="0fxcs2l6g1gkvydl04ippkq192jn0zl2c304ww4hczzpvn7l8lsp"; depends=[Rcpp]; }; + NPBayesImputeCat = derive2 { name="NPBayesImputeCat"; version="0.3"; sha256="19y98gj0ww13kddimzm0kfkpz6lxv7libwi6j34z3cy9jn7zrncw"; depends=[dplyr ggplot2 Rcpp reshape2 rlang tidyverse]; }; NPC = derive2 { name="NPC"; version="1.1.0"; sha256="06y6vdln5zyinq9bsp66yz6i1v5bkw9pa2hknl9brwc75z359apn"; depends=[coin dplyr matlab permute]; }; NPCD = derive2 { name="NPCD"; version="1.0-11"; sha256="107i33z4q5w2828sm0pm8234kmp1v3a2w72lmhvi0rpnjhg0x120"; depends=[BB R_methodsS3]; }; NPCirc = derive2 { name="NPCirc"; version="2.0.1"; sha256="1pyckjvf4vzns9hxnhnk7cm4abllmdj3f142pvjhnilyqwndqgyc"; depends=[circular misc3d movMF plotrix rgl shape]; }; NPHMC = derive2 { name="NPHMC"; version="2.2"; sha256="000x9y00gfkaj5lf00a55b9qx15x05yp3g3nmp8slyzsnfv66p5d"; depends=[smcure survival]; }; NPHazardRate = derive2 { name="NPHazardRate"; version="0.1"; sha256="0na4iphva1dadz457ii8kxrhnki2asaxpbwr824rljyrldj9rcgg"; depends=[survival]; }; + NPIstats = derive2 { name="NPIstats"; version="0.1.0"; sha256="0hbx2mzz1z2158c943dqfn0pq1aybj1xxy55mmvld4djr5zrlz9w"; depends=[dplyr]; }; NPMLENCC = derive2 { name="NPMLENCC"; version="1.0"; sha256="1l11vczs7ijfpqv7i7j8c5sxyfcbipqx00lf75i2c0kf21njv1vx"; depends=[MASS survival]; }; NPMLEcmprsk = derive2 { name="NPMLEcmprsk"; version="3.0"; sha256="0nm88fsxgrfk0j0lmir57bhxy4p8ah503gpj6jdlvjqw862jigiq"; depends=[]; }; NPMLEmix = derive2 { name="NPMLEmix"; version="1.2"; sha256="056jb3kz34lajryfbzkhq0g372iib6h8mr74mq18xkarp5blgmsl"; depends=[CAMAN dplyr FDRreg Hmisc latexpdf Matrix mosaic pbapply pracma progress R_utils Rcpp REBayes Rmosek spatstat]; }; NPMVCP = derive2 { name="NPMVCP"; version="1.1"; sha256="13jpm46abwziq8859jhl6hg1znk3ws1q7g4vlr2jyri3qa6h22dd"; depends=[]; }; - NPP = derive2 { name="NPP"; version="0.2.0"; sha256="0zm67b9gs32snsd1knmdmz0ksksdin9cvqrqd94n7g378gdql96y"; depends=[]; }; + NPP = derive2 { name="NPP"; version="0.4.0"; sha256="1891s5j39i728vqs6xz1bywnvgalsbiknn3yqsg71zlhj3h8ikll"; depends=[]; }; NPS = derive2 { name="NPS"; version="1.1"; sha256="02idja149a2sj97sks4lhsaflpifyxi6n0rjlcq9993f84szfgsi"; depends=[]; }; NPflow = derive2 { name="NPflow"; version="0.13.3"; sha256="1bgdkm82pmzjv46pkxpvh5ffffmc6q68x5jjl7k330w9vwgx2kf0"; depends=[ellipse fastcluster ggplot2 pheatmap Rcpp RcppArmadillo reshape2 truncnorm]; }; - NPsimex = derive2 { name="NPsimex"; version="0.2-1"; sha256="1k9i1f5ckvzdns8f5qnm2zq7qs3wsgzsnfwdz21zmhmi6d0pwchm"; depends=[]; }; NRejections = derive2 { name="NRejections"; version="1.2.0"; sha256="0lzj7kyn4s8l306a6xwkgkv1z4dlfsr61i902lvdxv4ln4m6a5kq"; depends=[doParallel foreach matrixcalc mvtnorm StepwiseTest]; }; - NSM3 = derive2 { name="NSM3"; version="1.15"; sha256="1ss4gkswb6qr58v1pm9b77qllpn9ks9xq5faiixvmbijjz3kkbj2"; depends=[agricolae ash binom BSDA coin combinat fANCOVA gtools Hmisc km_ci MASS metafor nortest np partitions quantreg Rfit SemiPar SuppDists survival waveslim]; }; - NSO1212 = derive2 { name="NSO1212"; version="1.1.0"; sha256="0agsabhdx3il284ycycqq9jhkin513ygsfdbjx5l3h88smy8i7f2"; depends=[httr jsonlite]; }; - NST = derive2 { name="NST"; version="3.0.3"; sha256="13ki87gkrxczd45kx7bn37sk7r7bgvrs9ysz9ya6mmvc2nab6gpn"; depends=[ape bigmemory iCAMP permute vegan]; }; + NSM3 = derive2 { name="NSM3"; version="1.16"; sha256="18wihr8qzdkyd6pwxq8yz2wrj0nh1sh713nflv4jiiczg6d965b8"; depends=[agricolae ash binom BSDA coin combinat fANCOVA gtools Hmisc km_ci MASS metafor nortest np partitions quantreg Rfit SemiPar SuppDists survival waveslim]; }; + NSO1212 = derive2 { name="NSO1212"; version="1.2.0"; sha256="0xc1hc0bjgr8f6qwh6l9184d5indvkyilc0fhb2lizhi9m0j2jx7"; depends=[httr jsonlite]; }; + NST = derive2 { name="NST"; version="3.0.6"; sha256="02frl4vpdw14gkgx7g0pi7zl342pkmszh48ggsf3b3qchsj5i1iz"; depends=[ape bigmemory iCAMP permute vegan]; }; NSUM = derive2 { name="NSUM"; version="1.0"; sha256="1as4g3v7qlk9wxlpwhg293980jq9gy6qay77bbcrjf481gvkkbp6"; depends=[MASS MCMCpack]; }; NScluster = derive2 { name="NScluster"; version="1.3.4"; sha256="1bkzmm573ic6xrsqbbln865rfw2xnmby632m3jcgamddxppx3fjf"; depends=[]; }; NTS = derive2 { name="NTS"; version="1.1.2"; sha256="02gh9yqflwgqws7a14wwb1y7qx0whw4ss1kkfgh9jp6bxc2dclnf"; depends=[dlm MASS MSwM Rdpack tensor]; }; @@ -2945,7 +3041,7 @@ in with self; { NVCSSL = derive2 { name="NVCSSL"; version="1.0"; sha256="00dpi0b0zm5cfkyb2z8wfkw6xcax2kkplm9rzkvfjz7fchlmkx5r"; depends=[grpreg Matrix plyr]; }; NameNeedle = derive2 { name="NameNeedle"; version="1.2.6"; sha256="0cs65hs6fbkxv8pc2m4394c68nqbahjcryjnhhrhg50wam3y03lq"; depends=[]; }; NanoStringNorm = derive2 { name="NanoStringNorm"; version="1.2.1.1"; sha256="1c2w129mz0linnc959h11zyhm8kyfmifwnbyi75iinqs373kv7vw"; depends=[gdata vsn XML]; }; - NatureSounds = derive2 { name="NatureSounds"; version="1.0.3"; sha256="0db7y6213bkmfjr2r3jkdbx0wja778cgnavap03v7fswrl61w61m"; depends=[knitr tuneR]; }; + NatureSounds = derive2 { name="NatureSounds"; version="1.0.4"; sha256="1l8c0zn0bbrcdf098pcbr8fvrl614cl6iq820q0sd7sr36n3k1jr"; depends=[knitr tuneR]; }; NbClust = derive2 { name="NbClust"; version="3.0"; sha256="1vwb48zy6ln1ddpqmfngii1i80n8qmqyxnzdp6gbaq96lakl3w3c"; depends=[]; }; NegBinBetaBinreg = derive2 { name="NegBinBetaBinreg"; version="1.0"; sha256="0ryi9gdf4sis77c0qxm6r86mfkk1nq9djs297y64nr6ng3rv9p9d"; depends=[boot Matrix mvtnorm]; }; Neighboot = derive2 { name="Neighboot"; version="1.0.0"; sha256="116q82svg8sw1xwnx253nd8vrv5i70rj45v7lf00m778rh9l2rmr"; depends=[dplyr igraph magrittr RDS RDStreeboot]; }; @@ -2955,11 +3051,12 @@ in with self; { NetData = derive2 { name="NetData"; version="0.3"; sha256="1jf05zwy0c6gmm7kvxlwvai61bz4wpsw7cl0h4i21ipzn1rqxmqj"; depends=[]; }; NetIndices = derive2 { name="NetIndices"; version="1.4.4"; sha256="0ydivbri8l8zkxi18ghj9h66915scyhca8i9mcyq4b06mjfigss8"; depends=[MASS]; }; NetLogoR = derive2 { name="NetLogoR"; version="0.3.7"; sha256="0w32sp5lc37bd9fb2wn3lnym82jz3wi24fpdrs33cvkbvry12c04"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; }; - NetMix = derive2 { name="NetMix"; version="0.1.5"; sha256="1s6h5d34fd6brpiank2mpvpscvsgw86zfyq677s8nh8bkrc4idzs"; depends=[clue gtools igraph lda MASS Matrix poisbinom Rcpp RcppArmadillo RSpectra]; }; - NetOrigin = derive2 { name="NetOrigin"; version="1.0-3"; sha256="162dhyx7z1nd3z14lfvm3dz0qwwvrc3n17zswbnwcfj6g1b1p2f1"; depends=[colorspace Hmisc igraph]; }; + NetMix = derive2 { name="NetMix"; version="0.2.0"; sha256="097cyk0lf3h4v3ff0icqj7a80yvs06damw1sc4hdqf2f21d6qihh"; depends=[clue gtools igraph lda MASS Matrix poisbinom Rcpp RcppArmadillo]; }; + NetOrigin = derive2 { name="NetOrigin"; version="1.1-2"; sha256="0jm1iqv3ljplf38zxrxh4hjvz30m7i18vizr9pcrx010fcgqxqhp"; depends=[colorspace corpcor Hmisc igraph mvtnorm]; }; NetPreProc = derive2 { name="NetPreProc"; version="1.1"; sha256="0r51dqymf2nqm86py4zwdlf7qf120j0bg9r6a9c0gsyyijh4z40p"; depends=[graph]; }; NetRep = derive2 { name="NetRep"; version="1.2.4"; sha256="1swlb2k9bc7whvslxbklz864j9ynvna73hvq5rhv61cv5vy05ksd"; depends=[abind BH foreach RColorBrewer Rcpp RcppArmadillo RhpcBLASctl statmod]; }; - NetSimR = derive2 { name="NetSimR"; version="0.1.0"; sha256="0iadlvc7m78svkjcwx18pk18jg7dv69gm1cvkz8k2a7b1absd9f5"; depends=[]; }; + NetSci = derive2 { name="NetSci"; version="0.1.0"; sha256="1gnf9ksy5b1k08dx40hikaj8m9dkpbsl7lvxrmpg35gmm4krysvx"; depends=[binr CoDiNA dplyr igraph magrittr Rfast wTO]; }; + NetSimR = derive2 { name="NetSimR"; version="0.1.1"; sha256="01w2nlk1g0h81pbn3g3ch09k3ljcisysgpwihv6wlgd1wclaafmz"; depends=[]; }; NetSwan = derive2 { name="NetSwan"; version="0.1"; sha256="1mwdy3ahagiifj2bd1ajrafvnxzi74a1x1d3i2laf1hqpz3fbgld"; depends=[igraph]; }; NetWeaver = derive2 { name="NetWeaver"; version="0.0.6"; sha256="058fi3vbp11mbg69n4yp1zf48akfdl6s2p0qpa0v6ngmk2zjk0bq"; depends=[]; }; NetworkChange = derive2 { name="NetworkChange"; version="0.7"; sha256="0d9p52n4krhxy5l3f27xs90jw4am0slvyv3p6q57ba8sbwliafrf"; depends=[abind GGally ggplot2 ggrepel ggvis gridExtra igraph MASS MCMCpack mvtnorm network qgraph RColorBrewer reshape rlang Rmpfr sna tidyr]; }; @@ -2969,7 +3066,6 @@ in with self; { NetworkInference = derive2 { name="NetworkInference"; version="1.2.4"; sha256="1x63szbns8wf3k89ibk2p66prngw4fr2ckfn1568mnxdwnzvhrb4"; depends=[assertthat checkmate ggplot2 ggrepel Rcpp RcppProgress]; }; NetworkReg = derive2 { name="NetworkReg"; version="1.0"; sha256="0ymbigvl1n5348g77jqs1bcda00kdqrm7zifc0ibh5mwsrx6cmds"; depends=[Matrix randnet RSpectra]; }; NetworkRiskMeasures = derive2 { name="NetworkRiskMeasures"; version="0.1.4"; sha256="1121ma43jxc4p9rw0sc8w32shf9xrmn5qd1xsqgzr8diymc49zhg"; depends=[dplyr expm ggplot2 Matrix]; }; - NetworkSim = derive2 { name="NetworkSim"; version="0.1.0"; sha256="1gvhzlmq46p99wald4pjnv9wxxqdympjkh3bzi98qa7qi84lny7y"; depends=[igraph incgraph]; }; NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.4.1"; sha256="1zm6qgjijwadmwm7hx2w9j813qdrg4hxdxgq619gsjvmqmhgskl5"; depends=[corrplot doParallel fdrtool foreach igraph IsingFit MASS pbapply ppcor psych pwr qgraph R_matlab]; }; NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.2"; sha256="0d73rbp8v0k0j8dp4yigan7krhglx6qfbadvyg7nsj67xc00vbfd"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; NeuralSens = derive2 { name="NeuralSens"; version="0.2.2"; sha256="17i4dyd487wnvw1zj3jciw684spc62hmjxkcy5scjbpvjv1ymn4y"; depends=[caret fastDummies ggforce ggnewscale ggplot2 gridExtra Hmisc NeuralNetTools reshape2 scales stringr]; }; @@ -2979,16 +3075,16 @@ in with self; { NipponMap = derive2 { name="NipponMap"; version="0.2"; sha256="0jk3zz05vhximbbm15h7ngb0ffxp5w8zhisifipkdgvg1hpi7pb7"; depends=[sf tibble]; }; NitrogenUptake2016 = derive2 { name="NitrogenUptake2016"; version="0.2.3"; sha256="13mh63z3x8yqd31v5a4d10bhzk4y67ac38flwk2msv7qcx37sny6"; depends=[car MASS zoo]; }; NlcOptim = derive2 { name="NlcOptim"; version="0.6"; sha256="121njnbfww6qijbc9x6prw35glyzm18di01qvvjn62z4kgq4f7vi"; depends=[MASS quadprog]; }; - NlinTS = derive2 { name="NlinTS"; version="1.4.4"; sha256="1v01gmk3g8j9wampldn2h82cxwqpqd12z5bydkx7b8a47znnfgij"; depends=[Rcpp Rdpack timeSeries]; }; - NlsyLinks = derive2 { name="NlsyLinks"; version="2.0.6"; sha256="1kdqifwjkkk4x1ixg3ca6lbqx79ab907nnzwxca5iw721mbk5njg"; depends=[lavaan]; }; - Nmisc = derive2 { name="Nmisc"; version="0.3.5"; sha256="1328sfxhkq1lyx8wx2k112iq9lxhg067gnk36vgxpcsq42vdzycr"; depends=[dplyr magrittr purrr rappdirs rlang stringr tibble tidyselect]; }; + NlinTS = derive2 { name="NlinTS"; version="1.4.5"; sha256="045gqsy9q64mh10swm9a1bh8jvr41rjks3024cc195lad6jhj441"; depends=[Rcpp Rdpack timeSeries]; }; + Nmisc = derive2 { name="Nmisc"; version="0.3.7"; sha256="1k43cp63h96xv3f28fpvw7p2yh3lv1jbhq9bdp3yk6cg0870vya7"; depends=[dplyr magrittr purrr rappdirs rlang stringr tibble tidyselect]; }; NobBS = derive2 { name="NobBS"; version="0.1.0"; sha256="0i0jyny1c29knpcl4szqwyxvdc3dqjfk5lf2xvwjdx3qas92w03l"; depends=[coda dplyr magrittr rjags]; }; NoiseFiltersR = derive2 { name="NoiseFiltersR"; version="0.1.0"; sha256="0y90si8f5hsi273g10hw700r72la30hwqlwg59gaq76wqlkm8j0p"; depends=[caret e1071 kknn MASS nnet randomForest rJava rpart RWeka]; }; NominalLogisticBiplot = derive2 { name="NominalLogisticBiplot"; version="0.2"; sha256="0m9442d9i78x57gdwyl3ckwp1m6j27cam774zkb358dw5nmwxbmz"; depends=[gmodels MASS mirt]; }; NonCompart = derive2 { name="NonCompart"; version="0.4.7"; sha256="0j0faci2n0hcr136xdbxvlljqcbxv8h5mf99q13ifcw92d7dr85d"; depends=[]; }; NonNorMvtDist = derive2 { name="NonNorMvtDist"; version="1.0.2"; sha256="11xqdrx03q3anavyxpzb0hz6mcbdy252rzzjlpa2byfdlrfvn178"; depends=[cubature]; }; + NonParRolCor = derive2 { name="NonParRolCor"; version="0.6.0"; sha256="0z4c5f2x995k2lgfwnylag69sgrzq1n3qg9c8fn1mhzkdw4y4108"; depends=[colorspace doParallel foreach gtools pracma scales]; }; NonProbEst = derive2 { name="NonProbEst"; version="0.2.4"; sha256="1w2ihnwwdnxlnphyd26261lsxaknpi51c15rmn9m183djz9gsvdv"; depends=[caret e1071 glmnet Matrix sampling]; }; - NonlinearTSA = derive2 { name="NonlinearTSA"; version="0.4.0"; sha256="1hq068jzl41fazy4j6jj24myszcnl4qhdfmmf1yyc4s56d9p962c"; depends=[car minpack_lm tsDyn]; }; + NonlinearTSA = derive2 { name="NonlinearTSA"; version="0.5.0"; sha256="1z3fqw19kksadc31f1idrj37gzajrx91pprd07xdar7j6hddf4sn"; depends=[car minpack_lm tsDyn]; }; NonpModelCheck = derive2 { name="NonpModelCheck"; version="3.0"; sha256="13qk2wbgpdf763q5xg29p2hxwqpml23pcgxrzmx12vnapnqfh71k"; depends=[dr]; }; Nonpareil = derive2 { name="Nonpareil"; version="3.3.4"; sha256="1hhshcggfv92ll5zqh8hd3pldp07n0684yh1252z2jv2vbl87v3z"; depends=[]; }; NormExpression = derive2 { name="NormExpression"; version="0.1.0"; sha256="1j4q8mb70ig40acfd9kfy12vxdvq3qpf53rxh47kkw8mywnd0449"; depends=[]; }; @@ -2998,20 +3094,21 @@ in with self; { NormalLaplace = derive2 { name="NormalLaplace"; version="0.3-0"; sha256="0njgjdx2yvvy5jb5zn6zr7jdz5hck5bbkicv15z4ai4ibmckqjmh"; depends=[DistributionUtils GeneralizedHyperbolic]; }; NostalgiR = derive2 { name="NostalgiR"; version="1.0.2"; sha256="0rpvwi815sdhaxqpji1y6g0vy8mkn5k6wci0a4jf54pkywwkwrwp"; depends=[txtplot]; }; Nozzle_R1 = derive2 { name="Nozzle.R1"; version="1.1-1"; sha256="05sjip4sz12mwd3jcbvk342p83kdmrd4l2jrh17p18w4l7w4nn0z"; depends=[]; }; - Numero = derive2 { name="Numero"; version="1.7.2"; sha256="0pizlng63mlmyy44sw35ajr9cyq09h1j6495hz9fq65d21jp652b"; depends=[Rcpp]; }; - NutrienTrackeR = derive2 { name="NutrienTrackeR"; version="1.0.0"; sha256="1cdmscxyr3fm036iw0dh3anbck2zr5fv2kmhx5qc2zr8y7c1kys2"; depends=[ggplot2 shiny]; }; - OAIHarvester = derive2 { name="OAIHarvester"; version="0.3-1"; sha256="00715bw5ix4w5qfwwqd2bhqcs8m6b44402nglfdwjr9crp95whhq"; depends=[curl xml2]; }; - OBASpatial = derive2 { name="OBASpatial"; version="1.7"; sha256="0zn5cbj40nfnqw51rc4jg1fhkr95yapcsdp76jdhnh3fqi4i228f"; depends=[cubature HDInterval invgamma LaplacesDemon modeest mvtnorm truncdist]; }; + Numero = derive2 { name="Numero"; version="1.8.0"; sha256="1phjk601s29wjs19cvchn2wgld4srbcxgqsh70vp1ar0b4fgf30w"; depends=[Rcpp]; }; + NutrienTrackeR = derive2 { name="NutrienTrackeR"; version="1.1.0"; sha256="1xik2q229vkh34q211b6a1pij9fvcs0wik0ypl4j1jlfvl673rz8"; depends=[ggplot2 shiny]; }; + OAIHarvester = derive2 { name="OAIHarvester"; version="0.3-2"; sha256="1vwi3dvpnlap1w96xc4q0cv7lym616sf4rgdqim250nsw5ciyiwx"; depends=[curl xml2]; }; + OBASpatial = derive2 { name="OBASpatial"; version="1.8"; sha256="1xc4qz3i5pphgf17asyiafdnlhv5k88rw0fwkwfh8cz767wip1hw"; depends=[cubature HDInterval invgamma LaplacesDemon modeest mvtnorm truncdist]; }; OBMbpkg = derive2 { name="OBMbpkg"; version="1.0.0"; sha256="01wch8wwij3fd0jambk0hpkhlnp4ryrq8qnnr2w1iad9zssjyii5"; depends=[]; }; OBsMD = derive2 { name="OBsMD"; version="6.1"; sha256="0jvvcx2lc39rdnlbhykam6cf94lbci9zc1vshwfhvygblnmjgrzr"; depends=[]; }; - OCA = derive2 { name="OCA"; version="0.2"; sha256="02kja2ixqv4rcjlkzidwmjplmpkjlzcniabyn39zdi6601hfv1jr"; depends=[]; }; - OCNet = derive2 { name="OCNet"; version="0.3.2"; sha256="1cc0qxxkasn32fdv4rnnpnj9jh3qlwq47695z9dxgqb30yrwfqxz"; depends=[fields igraph rgdal rgl sp spam SSN]; }; + OCA = derive2 { name="OCA"; version="0.4"; sha256="0ci3c5kfv3v2h7cir1f7f8r2yd0iiz2wcab512nf36mf1y5k666s"; depends=[]; }; + OCNet = derive2 { name="OCNet"; version="0.4.0"; sha256="0fxh6y1zvdia73a9xaxxz27jas0mgxhjmb5ya3hmfgglb27fvq8i"; depends=[fields igraph rgdal rgl sp spam SSN]; }; ODB = derive2 { name="ODB"; version="1.2.1"; sha256="0frkbl99ilpmppm4fm97lbkqhmjgcwlz9j5vh5nzzcsxrh8qwicn"; depends=[DBI RJDBC]; }; ODEnetwork = derive2 { name="ODEnetwork"; version="1.3.2"; sha256="0wicp0xxqq3jl0kjhc26iqpk8rwa9nv2aiwf18pkgnqxbyw6lgnp"; depends=[checkmate deSolve]; }; ODEsensitivity = derive2 { name="ODEsensitivity"; version="1.1.2"; sha256="0yddv5h3y0xfviqjgrbixawd00jc1rh9ngckfqka5j855vhchh66"; depends=[checkmate deSolve ODEnetwork sensitivity]; }; ODS = derive2 { name="ODS"; version="0.2.0"; sha256="0i7giibass7hadvv6mb7k9xrykgfss57jmm6gpbym8qcywhzq4ny"; depends=[cubature survival]; }; OData = derive2 { name="OData"; version="0.6"; sha256="10r4kfhdabramjmkgc4fl0bljaiqbvc7rq4byas7q8cmji2czw6f"; depends=[RJSONIO XML]; }; OECD = derive2 { name="OECD"; version="0.2.4"; sha256="1cxjd5h10ynjzblk5d5crdknk19pn8ik37d8hffvz5iydp7ammqn"; depends=[httr rsdmx xml2]; }; + OEFPIL = derive2 { name="OEFPIL"; version="0.1.0"; sha256="07i33757py898kflvfwl62rjmlywvis9l3c0qjjl8fkl98p3rwxz"; depends=[Deriv ggplot2 MASS matrixcalc minpack_lm plyr]; }; OGI = derive2 { name="OGI"; version="1.0.0"; sha256="0qw55jamkvdf3vfa5c0ygbymbs4d9q15dihiqz691hdfnyjvc2mk"; depends=[lpSolve]; }; OHPL = derive2 { name="OHPL"; version="1.4"; sha256="0svim112khdymdj1bsj8vri6r0zph5312y148mlh5h98rah40i08"; depends=[glmnet mvtnorm pls]; }; OIdata = derive2 { name="OIdata"; version="1.0"; sha256="078khxrszwnrww2h0ag153bf59fnyhirxy4m56ssgr2gmfahaymf"; depends=[maps RCurl]; }; @@ -3021,6 +3118,7 @@ in with self; { OOBCurve = derive2 { name="OOBCurve"; version="0.3"; sha256="1i7prybs3b60ipl34zrq6mcr6w9kc1d44b14mxcd752k42k6xs2r"; depends=[mlr randomForest ranger]; }; OOI = derive2 { name="OOI"; version="0.1.0"; sha256="0ivxgq539v68kak3zzakywppba0grzh7qn1h404s4ag30cxv0g8p"; depends=[modi]; }; OOR = derive2 { name="OOR"; version="0.1.3"; sha256="13v04rx2q6pbiq7dyd29wvimkr4sbq2f5rnn3a0lcbwr3x35r7h9"; depends=[]; }; + OOS = derive2 { name="OOS"; version="1.0.0"; sha256="0jnj5y26rv0i2561mywcxb7aavmpq16ippq6rblb8jiqjd05nhib"; depends=[caret dplyr forecast furrr future ggplot2 glmnet imputeTS lmtest lubridate magrittr purrr sandwich tidyr vars xts zoo]; }; OOmisc = derive2 { name="OOmisc"; version="1.2"; sha256="09vaxn5czsgn6wpr27lka40kzd76jzqgqxavf26ms3m9kkdf83g4"; depends=[]; }; OPDOE = derive2 { name="OPDOE"; version="1.0-10"; sha256="04z944i4f3i0cjnxh32wf7n2dfyynnvkz4lxdkn90flam2np58yv"; depends=[crossdes gmp mvtnorm nlme orthopolynom polynom]; }; OPI = derive2 { name="OPI"; version="2.9"; sha256="0nkdzl4c6k77phiig3mjwp9dkyarcr4k07mxc6ff72yr776s2pma"; depends=[]; }; @@ -3030,6 +3128,7 @@ in with self; { ORIClust = derive2 { name="ORIClust"; version="1.0-1"; sha256="1biddddyls2zsg71w4innxl0ckfb80q2j9pmd56wvbc0qnbm0w3q"; depends=[]; }; ORION = derive2 { name="ORION"; version="1.0.1"; sha256="09z1yhiv88nxgig81zwxnwaqwswbql2dhilsln0ksis49p8il3kg"; depends=[doParallel e1071 foreach igraph knitr randomForest rmarkdown TunePareto]; }; ORMDR = derive2 { name="ORMDR"; version="1.3-2"; sha256="0y7b2aja3zvsd6lm7jal9pabcfxv16r2wh0kyzjkdfanvvgk3wmm"; depends=[]; }; + ORTSC = derive2 { name="ORTSC"; version="1.0.0"; sha256="0byja1gi44ymn68cfai8apcimlxmnflqr1pj8k4y7l8lqd3fyz60"; depends=[googleAuthR googleCloudVisionR]; }; ORdensity = derive2 { name="ORdensity"; version="1.0"; sha256="1g9d85dyfhlqmwsigdn64hifasbvw70g3wpph2h9v2ksvia0cd31"; depends=[cluster distances doParallel doRNG foreach plyr Rfast]; }; OSCV = derive2 { name="OSCV"; version="1.0"; sha256="17wrfak6b6m2l3iqbhdwcfh0rlqb14rkvrbari7v46gya9v7hq20"; depends=[mc2d]; }; OSDR = derive2 { name="OSDR"; version="1.1.3"; sha256="059sj003zsrabmjfhwvvpi599ssrckcqpiw2b3vz405ljnhjmlap"; depends=[]; }; @@ -3039,7 +3138,9 @@ in with self; { OTRselect = derive2 { name="OTRselect"; version="1.0"; sha256="1bh14228yz552ngywjf1qyh1isqj4cgiy7n7d4zg8dpqwxr04ykp"; depends=[lars survival]; }; OTUtable = derive2 { name="OTUtable"; version="1.1.2"; sha256="1sm037ihm12xyp7ns5f0c1psflvm1aj3xnsj5nzh2rsjn35hvd6h"; depends=[]; }; OTclust = derive2 { name="OTclust"; version="1.0.4"; sha256="11mr67zp68wzf1dd6vb3f31g8a430im97sdjsb0w4awqpmjdyyrz"; depends=[class ggplot2 magrittr RColorBrewer Rcpp]; }; - OUwie = derive2 { name="OUwie"; version="2.5"; sha256="1kvs6s18qbvc9k9i99lhnyfgsvhf5rwm5wj7sc06d751jllk7b16"; depends=[ape corpcor geiger igraph interp lhs nloptr numDeriv paleotree phangorn phylolm phytools RColorBrewer]; }; + OTrecod = derive2 { name="OTrecod"; version="0.1.0"; sha256="1h1xlp0j6ch17a02gy5nyv6nr7mvrz6bhx9h2wmak06x1y8bxirx"; depends=[dplyr FactoMineR mice missMDA ompr ompr_roi party plyr proxy rdist ROI ROI_plugin_glpk StatMatch vcd]; }; + OUwie = derive2 { name="OUwie"; version="2.6"; sha256="0yh0hnlrimfqajl0qixs0ciiwpl9r38w9y1g9bhgvafj190ikb54"; depends=[ape corpcor geiger igraph interp lhs nloptr numDeriv paleotree phangorn phylolm phytools RColorBrewer]; }; + OVtool = derive2 { name="OVtool"; version="1.0.1"; sha256="0ixq8j6p59ngfbvlmhr3bi1cqlz06ygzzarjjrzzacmafg1ylp8m"; depends=[Amelia devtools dplyr EnvStats ggplot2 ggrepel glue magrittr metR progress purrr rlang survey tibble tidyselect twang varhandle]; }; OWEA = derive2 { name="OWEA"; version="0.1.1"; sha256="00mx94v3krivsxha6sh13xhn2bdj77g8858vc4r2cy23ab4bg0g7"; depends=[gtools MASS shiny]; }; Oarray = derive2 { name="Oarray"; version="1.4-9"; sha256="04jng89s19rd8lbjm76wm4p4ggkffwnsa5qa60c4lwn2rj89a8a1"; depends=[]; }; OasisR = derive2 { name="OasisR"; version="3.0.2"; sha256="1388ld2nws3ppnkavg8s59q3inqf365c5cf9qvzbj6icmwqs9rdd"; depends=[measurements outliers rgdal rgeos seg spdep]; }; @@ -3049,27 +3150,28 @@ in with self; { OjaNP = derive2 { name="OjaNP"; version="1.0-0"; sha256="0xddspnnwlcxh2i66ilh6i920k53y7fv6m1hgj9h28qg2wy0vyah"; depends=[ICS ICSNP Rcpp]; }; OkNNE = derive2 { name="OkNNE"; version="1.0.0"; sha256="0ggx508cqkqc51qw10cajm8r3k5h474n7y8dgck2fr4db047zmcm"; depends=[FNN]; }; OligoSpecificitySystem = derive2 { name="OligoSpecificitySystem"; version="1.3"; sha256="17mspf1ph2ybv046zckykfdcbrsiz40hrs6ib5mpwkfnrvsp1w7l"; depends=[tkrplot]; }; + OmegaG = derive2 { name="OmegaG"; version="1.0.1"; sha256="1aihcrgml67rvnx9vpnq2nnbc79kicw4ks1fradsa36ykkdz6b1g"; depends=[]; }; OmicKriging = derive2 { name="OmicKriging"; version="1.4.0"; sha256="08frr38yf5d0l3zwkbq9465xrbyzsn8sx9icqc3yvfnxrkhrpzig"; depends=[doParallel foreach irlba ROCR]; }; OmicsPLS = derive2 { name="OmicsPLS"; version="1.2.0"; sha256="108rp76g4cy7zaxv9q979rlv4pn9kb5i3f3iz29cdvxm55a55khv"; depends=[ggplot2 magrittr tibble]; }; - Omisc = derive2 { name="Omisc"; version="0.1.3"; sha256="10xg9pn1yr11ngd3l3zykdig8gjp69kcq8300rqml8kb1jlhrrrn"; depends=[copula MASS psych]; }; + Omisc = derive2 { name="Omisc"; version="0.1.4"; sha256="1f6aakywjabq0xds5yl70ivr1jmw26zry2m65xszfp8p5mp45c7g"; depends=[copula MASS psych]; }; OmnibusFisher = derive2 { name="OmnibusFisher"; version="1.0"; sha256="0x3q04g45nixgsrl4biqqi6bk4kx79spq5whm3n4ppr0nkv8dw4h"; depends=[CompQuadForm stringr survey]; }; OnAge = derive2 { name="OnAge"; version="1.0.1"; sha256="1zby5sf92c185b5m19jv4ndgbv6mz107nc47zn1d6bijrypzpc20"; depends=[]; }; OncoBayes2 = derive2 { name="OncoBayes2"; version="0.6-5"; sha256="1c8q3kd295hnky7pdd78na92gms5wjs1pjds9smwmpi7lpq0qz3b"; depends=[abind assertthat bayesplot BH checkmate dplyr Formula ggplot2 Rcpp RcppEigen rstan rstantools StanHeaders tibble tidyr]; }; Oncotree = derive2 { name="Oncotree"; version="0.3.3"; sha256="147rc9ci66lxbb91ys2ig40sgmldi15p604yysrd4ccbxpbk2zwf"; depends=[boot]; }; - OneArmPhaseTwoStudy = derive2 { name="OneArmPhaseTwoStudy"; version="1.0.3"; sha256="0q8g33s1jq0ipvwq83xhrly8idsh68licgyivxc628zbm1id5p38"; depends=[Rcpp]; }; OneR = derive2 { name="OneR"; version="2.2"; sha256="1k7rzhcwq5b2yi4zfsc1r0yb6w65gxj9835d2a1dclallja3zav2"; depends=[]; }; - OneStep = derive2 { name="OneStep"; version="0.9.1"; sha256="1qqc5rvy2hssflw4qpr548xs7hjian191827dim29b3mr2i2hnry"; depends=[fitdistrplus numDeriv]; }; + OneStep = derive2 { name="OneStep"; version="0.9.2"; sha256="06gnw364p74nnb9rx3ghyfavd02xmnvzy94hzdwgxqs86z30b2gz"; depends=[fitdistrplus numDeriv]; }; OneTwoSamples = derive2 { name="OneTwoSamples"; version="1.0-3"; sha256="0019rc2f4jmbm6sinkvalvjqwi822x78aiin88kg8qbbb5ml8l89"; depends=[]; }; OpVaR = derive2 { name="OpVaR"; version="1.1.1"; sha256="0sb2brwv20ppgsw1x2zz4frkdwhgq8766k8fchr6flp4c4jkkyma"; depends=[actuar evmix MASS pracma ReIns tea truncnorm VineCopula]; }; OpasnetUtils = derive2 { name="OpasnetUtils"; version="1.3"; sha256="0mmn4dpk1wl8slg55xzhpk7jdwhkrka53rwmrsr73sikkh3mcyfn"; depends=[digest ggplot2 httpRequest igraph plyr RCurl reshape2 rgdal rjson sp triangle xtable]; }; OpenCL = derive2 { name="OpenCL"; version="0.2-1"; sha256="1bhnqwrb8phldk5hr06iyvw8fx03x01ddqr4y5zs4a1wpyah7j2w"; depends=[]; }; - OpenImageR = derive2 { name="OpenImageR"; version="1.1.7"; sha256="0yj98wzjqdd1671l7n1cjklj92177hjyqgwxvph22019ijrna9h6"; depends=[jpeg png R6 Rcpp RcppArmadillo shiny tiff]; }; + OpenImageR = derive2 { name="OpenImageR"; version="1.1.8"; sha256="0v07bm257h78n1bxc4a6vqhlq1a87h2yj83bph3bg9nwjg4lcw3z"; depends=[jpeg png R6 Rcpp RcppArmadillo shiny tiff]; }; OpenLand = derive2 { name="OpenLand"; version="1.0.1"; sha256="1wa7hkfwvzzj9lm07hdajwf6g8ys3g2ff8vqva3gqwqa9j1fam9n"; depends=[circlize dplyr ggplot2 gridExtra networkD3 raster tidyr]; }; OpenML = derive2 { name="OpenML"; version="1.10"; sha256="132swv22ymm0wxq8y65y2niq8chmga1mnl1lgn6m3cgljvwad47r"; depends=[backports BBmisc checkmate curl data_table digest httr jsonlite memoise stringi XML]; }; OpenMPController = derive2 { name="OpenMPController"; version="0.2-5"; sha256="00hs8v47pr2d726z8izkfrgmayw147hdm16rr9rw1zs3ad216zjj"; depends=[]; }; - OpenMx = derive2 { name="OpenMx"; version="2.18.1"; sha256="0gyjps0l3ig90piccgd04s63cz65kk5i5l9iyakps4bv27h1lzwm"; depends=[BH digest lifecycle MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; + OpenMx = derive2 { name="OpenMx"; version="2.19.5"; sha256="0k8j6wi30yf1r550hpwl87x63i5kznz5gs46b1pl8xxcrmb863sv"; depends=[BH digest lifecycle MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; OpenRepGrid = derive2 { name="OpenRepGrid"; version="0.1.12"; sha256="02p9b2y99z9yrrm2pl86p0yqwah0yjic2wdcd4k0mhccimmmkaip"; depends=[abind colorspace GPArotation openxlsx plyr psych pvclust rgl stringr XML]; }; - OpenRepGrid_ic = derive2 { name="OpenRepGrid.ic"; version="0.4.0"; sha256="0d6pq31f0r8pqyvv51zp8hcrhnfmp4dw7m6vlqy1b5kkr7622hy3"; depends=[dplyr DT formattable igraph magrittr openxlsx RColorBrewer reshape2 rintrojs scales shiny shinyBS shinycssloaders shinydashboard shinydashboardPlus shinyFeedback shinyjs shinythemes shinyWidgets stringr testthat tidyr tidyverse withr]; }; + OpenRepGrid_ic = derive2 { name="OpenRepGrid.ic"; version="0.5.0"; sha256="1vr112z2hh4q5krq7w7wkzky717nbjvgnpvwj962sqnkpln5v1f9"; depends=[dplyr DT formattable igraph magrittr openxlsx RColorBrewer reshape2 rintrojs scales shiny shinyBS shinycssloaders shinydashboard shinydashboardPlus shinyFeedback shinyjs shinythemes shinyWidgets stringr testthat tidyr tidyverse withr]; }; + OpenSpecy = derive2 { name="OpenSpecy"; version="0.9.1"; sha256="0hcx4dxhy223il7j2xdbg1pn592lcqga4dkimj5hfq0pmg54wikc"; depends=[digest dplyr hexView hyperSpec magrittr osfr rlang shiny signal]; }; OpenStreetMap = derive2 { name="OpenStreetMap"; version="0.3.4"; sha256="0kyv14lxi86n6aba4jqmsfpmn075k0ki34q6gkkvhq8yv48wg831"; depends=[ggplot2 raster rgdal rJava sp]; }; Opportunistic = derive2 { name="Opportunistic"; version="1.2"; sha256="0kaj11ziij1v65l972x4kbr7vzkx4dwa27ymabiip4dg57a976wr"; depends=[]; }; Opt5PL = derive2 { name="Opt5PL"; version="0.1.1"; sha256="0v3ibfzmkfnkhxylhaqcd3yqygsk7027ga12vb6gj4h4zcccf17f"; depends=[matrixcalc Rcpp]; }; @@ -3082,33 +3184,33 @@ in with self; { OptimaRegion = derive2 { name="OptimaRegion"; version="1.1"; sha256="1bikc12a5v3q7f26r14pdfmnxpyqzxa94a10mx5g954km3a329ly"; depends=[boot DepthProc fields geometry magrittr mclust nloptr Rdpack Rdsdp rsm spam stringr]; }; OptimalCutpoints = derive2 { name="OptimalCutpoints"; version="1.1-4"; sha256="0n2vmzkc733yzs155zdj2n8ng74x9hy4m91fl7fac8d4gnrnc8yg"; depends=[]; }; OptimalDesign = derive2 { name="OptimalDesign"; version="1.0.1"; sha256="02vxxb25q7fl73y7zq0a89ra0s88wji4mrql7p88014p073lj2as"; depends=[lpSolve Matrix matrixcalc matrixStats plyr quadprog rgl]; }; + OptimalRerandExpDesigns = derive2 { name="OptimalRerandExpDesigns"; version="1.1"; sha256="033qwzglpzjk302dr19yak34j2k19k6vihd3vlj9c8xsiikmrfmj"; depends=[ggplot2 GreedyExperimentalDesign momentchi2]; }; OptimalTiming = derive2 { name="OptimalTiming"; version="0.1.0"; sha256="1mchb7wdk1v56la30ivi40aq6zma64lrdb94d64d0s7x67m8315w"; depends=[mstate survival]; }; OptionPricing = derive2 { name="OptionPricing"; version="0.1"; sha256="0j98h3fn29xfv7xyp7av459v56chw99pnvmsbqvrv4g77p60f5q2"; depends=[]; }; Orcs = derive2 { name="Orcs"; version="1.2.1"; sha256="0n693m8z0j4irk9zj6d1gpbn2vhfbfpf7z6iyx19iim3g242823q"; depends=[bookdown knitr lattice latticeExtra plotrix raster Rcpp remotes rgdal sf sp]; }; OrdFacReg = derive2 { name="OrdFacReg"; version="1.0.6"; sha256="16mavsmp6d8rfmimmp5ynwyzir0gycpg8rhd8cwanlrndyclqlpv"; depends=[eha MASS survival]; }; OrdMonReg = derive2 { name="OrdMonReg"; version="1.0.3"; sha256="1xca8pvvq79j484l2rmn4nva8ncx8z51g5diljikck231y8qjqaz"; depends=[]; }; - OrdNor = derive2 { name="OrdNor"; version="2.2.2"; sha256="1zgn3ij1wz3lilgpvcnh0bym5z74qf3g94dk5nrz0a202ck0m0gz"; depends=[corpcor GenOrd Matrix mvtnorm]; }; + OrdNor = derive2 { name="OrdNor"; version="2.2.3"; sha256="0yjvylp8z24w6nbwy9rjyk0y7gpzsxzsqm8x4q4fn8g87cb3314v"; depends=[corpcor GenOrd Matrix mvtnorm]; }; OrdinalLogisticBiplot = derive2 { name="OrdinalLogisticBiplot"; version="0.4"; sha256="1axn03yrw30r2j9ss5ig9sq857y37vhrr4a7px68jc2az8mng41j"; depends=[MASS mirt NominalLogisticBiplot]; }; OrgMassSpecR = derive2 { name="OrgMassSpecR"; version="0.5-3"; sha256="1dx9d8rb1dfqyhyc26zhfnxiv3rz2ikvs2mwqnsrq3lsjs9dvyc8"; depends=[]; }; OriGen = derive2 { name="OriGen"; version="1.4.3"; sha256="0a7mql87dqxrfx7phgy32hbanfwnjx8x52mj83xf2mgmqhrcikr6"; depends=[ggplot2 maps]; }; - OrthoPanels = derive2 { name="OrthoPanels"; version="1.1-3"; sha256="1bjwly22aawd2k4wqwjiaysivvwiv2zd9fyzcqsvldkq54zaszxn"; depends=[MASS]; }; + OrthoPanels = derive2 { name="OrthoPanels"; version="1.1-4"; sha256="112dvc1scv299rw1w30fw2jj4gz74b7sidcdzcba3mhn3k7aw0ja"; depends=[MASS]; }; OscillatorGenerator = derive2 { name="OscillatorGenerator"; version="0.1.0"; sha256="0zqw8l955msxkdviw5vd493749zwc22qby9mfmyqnqqmq0pyjw4w"; depends=[]; }; OutlierDC = derive2 { name="OutlierDC"; version="0.3-0"; sha256="1vm3zx4qmj9l0ddfqbksm1qyqzzqrxf93gh4kj52h68zlsfxwv41"; depends=[Formula quantreg survival]; }; OutlierDM = derive2 { name="OutlierDM"; version="1.1.1"; sha256="0n8iq464ryc3v4wms7cdka39870w5pg29z9v8gmdsp4d9cfsx9v4"; depends=[MatrixModels outliers pcaPP quantreg]; }; - OutlierDetection = derive2 { name="OutlierDetection"; version="0.1.1"; sha256="0z4797j2gr37c1jnhivczff3y2dd2kilyncc087ihpwaa26wv0nl"; depends=[DDoutlier depth depthTools ggplot2 ldbod plotly spatstat]; }; OutliersO3 = derive2 { name="OutliersO3"; version="0.6.3"; sha256="165v572w9bnvay9f0xyxzbhgj1i86ndia4rzqy98i48dfdbdb990"; depends=[cellWise dplyr FastPCS forcats GGally ggplot2 HDoutliers memisc rlist robustbase robustX tidyr]; }; OutrankingTools = derive2 { name="OutrankingTools"; version="1.0"; sha256="0z7pslkkinn7flc4xwjg0bsfswf8ad4jv9rmglaj3fmjcx9b6wgj"; depends=[igraph]; }; OwenQ = derive2 { name="OwenQ"; version="1.0.3"; sha256="0kra8pvz21kqwzwsrqh6vwfyq9qqrar3glcycd2gip19273whdim"; depends=[BH Rcpp RcppEigen RcppNumerical]; }; OxyBS = derive2 { name="OxyBS"; version="1.5"; sha256="11l3gm0jvw993jb13f6kpv77m6z0d1jswscma2v28qzkw053r3dc"; depends=[]; }; - PAC = derive2 { name="PAC"; version="1.1.3"; sha256="12q8zwdwfhf2g1jgs7783hj2r4n2bl056n4230lwfg773f7ks6l5"; depends=[dplyr ggplot2 ggrepel igraph infotheo parmigene Rcpp Rtsne]; }; + PAC = derive2 { name="PAC"; version="1.1.4"; sha256="0h7381mr3jgzl7fi6v7amgmkf5agpkgy068c6ysgh3adlwsh6gs6"; depends=[dplyr ggplot2 ggrepel igraph infotheo parmigene Rcpp Rtsne]; }; PACLasso = derive2 { name="PACLasso"; version="1.0.0"; sha256="1qzzymhfsjy8mk0r0xpd5h4wrx4wk8gq3vi6fnawkq5xkrg26rld"; depends=[lars limSolve MASS penalized quadprog]; }; PACVr = derive2 { name="PACVr"; version="0.9.4"; sha256="0sj5ibqaw452lncxxbm6xkgmmh9ny6hx4b9hppzwglpgk6vvb5f3"; depends=[BiocGenerics Biostrings genbankr GenomicAlignments GenomicRanges IRanges optparse RCircos]; }; PAFit = derive2 { name="PAFit"; version="1.0.1.8"; sha256="12rqf7mcbsc4ngq75gw8nrllqc2nd9l5p8jdnx6gjn26ldydg6h6"; depends=[igraph knitr magicaxis mapproj MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; }; PAFway = derive2 { name="PAFway"; version="0.1.3"; sha256="1ggmqbls8i5zqihzi66kaw09bbip2spiiizfzkx7amcvpm8zsr7r"; depends=[GGally ggplot2 igraph network scales sna]; }; PAGI = derive2 { name="PAGI"; version="1.0"; sha256="01j1dz5ihqslpwp9yidmhw86l112l7rfkswmf03vss872mpvyp3f"; depends=[igraph]; }; PAGWAS = derive2 { name="PAGWAS"; version="2.0"; sha256="0bz47ivd32kx1amgqllqbxyyvj773q7wasgk924hmibabiixa8nx"; depends=[foreach lars mnormt]; }; - PAMA = derive2 { name="PAMA"; version="0.1.1"; sha256="0iwfak74422gmfciin940rkqg7m2dkzv0d52jrkk0i6z58rhs426"; depends=[mc2d PerMallows]; }; - PAMmisc = derive2 { name="PAMmisc"; version="1.6.5"; sha256="11jilwsjb7vkfg79d6ajwwy3ylg30yg5s3qi7s55kvxx8ii5r8kv"; depends=[dplyr geosphere ggplot2 hoardr httr lubridate magrittr ncdf4 PamBinaries plotKML purrr RcppRoll rerddap RSQLite seewave stringr tuneR]; }; + PAMA = derive2 { name="PAMA"; version="1.1.0"; sha256="1ahd2kxg39vc4cg3ikraa2rm4w0b5asga1qcymv3hrcxxh91xqah"; depends=[ExtMallows mc2d PerMallows Rcpp]; }; + PAMmisc = derive2 { name="PAMmisc"; version="1.6.8"; sha256="02f14byw0dik0ncc3c9dr0zqfqsd528srq6q38la3w70lghr92gv"; depends=[dplyr geosphere ggplot2 hoardr httr lubridate magrittr ncdf4 PamBinaries plotKML purrr RcppRoll rerddap RSQLite seewave stringr tuneR viridisLite]; }; PAMpal = derive2 { name="PAMpal"; version="0.9.14"; sha256="1ijzqrndkpqhjczki6g2arp4fscvdff9gixgqlr9ibvr7g7b0z3f"; depends=[data_table dplyr gam ggplot2 knitr lubridate magrittr manipulate PamBinaries PAMmisc purrr readr reticulate rjson rlang RSQLite rstudioapi seewave signal stringr tidyr tuneR xml2]; }; PANDA = derive2 { name="PANDA"; version="0.9.9"; sha256="1sf3c49v4mb3mz2imqlqdbh1iab7bc2pxpi8bmgj2jld133555ip"; depends=[cluster GO_db]; }; PAS = derive2 { name="PAS"; version="1.2.5"; sha256="175p3bnpnhknfsc29hri0l2ipz1x6qcxs2bq7awns8lccam466r2"; depends=[glmnet]; }; @@ -3116,7 +3218,6 @@ in with self; { PASWR = derive2 { name="PASWR"; version="1.1"; sha256="1rxymnqvflypc6m62f5vw65l8x1m2yah7r11hhpmzdq2l2sg8fci"; depends=[e1071 lattice MASS]; }; PASWR2 = derive2 { name="PASWR2"; version="1.0.2"; sha256="04vwgmi56spjriwp2ls5zcgslfg1y4pvwa0m33f9izay0y6q2wfx"; depends=[e1071 ggplot2 lattice]; }; PASenseWear = derive2 { name="PASenseWear"; version="1.0"; sha256="0x84j1vdds4g08birmjxb0c2g1ahwv83bk11532jkmg32dnhmj58"; depends=[ggplot2]; }; - PAWL = derive2 { name="PAWL"; version="0.5"; sha256="1sx4g4qycba2j1fm0bvhz3hk6ghhdc37rz5zi1njqxrpmbnkqg04"; depends=[foreach ggplot2 mvtnorm reshape]; }; PAmeasures = derive2 { name="PAmeasures"; version="0.1.0"; sha256="0c2pkms06lijly9clxp6zkasqy4zjicdwnvbqwvhp45yavwmkkkj"; depends=[survival]; }; PAsso = derive2 { name="PAsso"; version="0.1.8"; sha256="0lywr5rs2ap8psv6wzm2j6h7wz9xq494y39934xj153nqgccbqrv"; depends=[copBasic copula doParallel dplyr foreach GGally ggplot2 goftest gridExtra MASS pcaPP plotly progress Rcpp tidyverse VGAM]; }; PAutilities = derive2 { name="PAutilities"; version="1.0.1"; sha256="13k0dkgz82d4iqc7kpz1cw71w1m3bjkar4a7xndms1nj6sp7vp03"; depends=[dplyr equivalence ggplot2 lazyeval lubridate magrittr matchingMarkets Rcpp reshape2 rlang]; }; @@ -3128,76 +3229,81 @@ in with self; { PBRF = derive2 { name="PBRF"; version="1.0.0"; sha256="1ibwywgbxnxcb3z2kl2bgh7fz512nhgy2zcdym67asp76c6rkqg6"; depends=[]; }; PBSadmb = derive2 { name="PBSadmb"; version="1.1.4"; sha256="11dxy6rdhwairymigwqxd51hxz82011sx0gzzphcs6i4gr0c54c3"; depends=[PBSmodelling]; }; PBSddesolve = derive2 { name="PBSddesolve"; version="1.12.6"; sha256="0570q1h91695qw9gnkv3d2bip40pzaapy66042qac4yjsg7wca2z"; depends=[]; }; - PBSmapping = derive2 { name="PBSmapping"; version="2.72.1"; sha256="0xri8in9631w7qd2m38614al90lr6hak6jh28hcsa8ihdp5azciy"; depends=[]; }; + PBSmapping = derive2 { name="PBSmapping"; version="2.73.0"; sha256="0mcvwldj4bxp5909phsjcjlhr7mg908zxcm170f127v29srd3zny"; depends=[]; }; PBSmodelling = derive2 { name="PBSmodelling"; version="2.68.8"; sha256="07qaqb6sd1idmryxlz0gxb4d3apzql9vp4b16nazba08ksx0y7wf"; depends=[XML]; }; PCA4TS = derive2 { name="PCA4TS"; version="0.1"; sha256="1qi9nlaf5181afrdvddh10a9vxyhry102n3dhai86im8yz4if9y6"; depends=[tseries]; }; - PCA4you = derive2 { name="PCA4you"; version="1.2.4"; sha256="117wb0h4jqjymm1p90m6vgj713iavrmj035c2gz5nynligvfnm83"; depends=[mixOmics]; }; PCADSC = derive2 { name="PCADSC"; version="0.8.0"; sha256="0pwkmmnsw3c6ch2k5wdc8ig71994pdp79v3a5aa9n9aq55a8c2ir"; depends=[ggplot2 Matrix pander reshape2]; }; - PCAmatchR = derive2 { name="PCAmatchR"; version="0.2.1"; sha256="13q4n4i09g54zrgwaxxsc4hksjh9bhcbmfwp92avz9qi7rdrff4s"; depends=[]; }; + PCAmatchR = derive2 { name="PCAmatchR"; version="0.3.0"; sha256="181glfz5nqffdyycycf4w96lyjkvqsbs3av47ah2hagl3innr1vk"; depends=[]; }; PCAmixdata = derive2 { name="PCAmixdata"; version="3.1"; sha256="0flrsnbchwk06dmkg3vqykp9n4pqs265szn1r10navp8ki3rrmvh"; depends=[]; }; PCDSpline = derive2 { name="PCDSpline"; version="1.0"; sha256="15kmvcwvwlsr1107n7mfajvf9b1kcslnhsdx0drjjhsvq193qrqa"; depends=[matrixcalc nleqslv]; }; PCDimension = derive2 { name="PCDimension"; version="1.1.11"; sha256="0kpw0rpb9k82psfpd19vvvsakvm0pcz1n3kkkcihagp1kzlv4xkw"; depends=[changepoint ClassDiscovery cpm kernlab oompaBase]; }; PCFAM = derive2 { name="PCFAM"; version="1.0"; sha256="196jzv0f6j60zkyagm9n98339ipn8mrhmhl3q4g053z8f6mm9zmv"; depends=[]; }; PCGSE = derive2 { name="PCGSE"; version="0.4"; sha256="0ky1nzhz6v9n34kas9nw2scc6ip7av19g09zcsxaa9436nhip4f6"; depends=[MASS RMTstat safe]; }; PCICt = derive2 { name="PCICt"; version="0.5-4.1"; sha256="17ipmv6ps7c9dv4k9kxjjynnlgr63baz9z9ndwfg0lckc3vw81ya"; depends=[]; }; + PCL = derive2 { name="PCL"; version="1.0"; sha256="0sqlwg0aiw9f1z4x5nixv4x3rq5rnm5i1hijdqygnh9dvckfrgs0"; depends=[]; }; PCMBase = derive2 { name="PCMBase"; version="1.2.11"; sha256="010188p7f4nr5jxayq02a8q2r23a9w9rd6njxckca99d903cpwg5"; depends=[ape data_table expm ggplot2 mvtnorm xtable]; }; PCMBaseCpp = derive2 { name="PCMBaseCpp"; version="0.1.9"; sha256="0k40mxs8w1vk7qwpkv8gnq6cq3kpj7wvf0i6f1qn1wmm2vvz1kfy"; depends=[abind data_table PCMBase Rcpp RcppArmadillo]; }; PCMRS = derive2 { name="PCMRS"; version="0.1-2"; sha256="1zr2kzwxgr7rifkkmgz9vhq5i9ky6lqrss742vybwl0nx78mad3p"; depends=[cubature ltm mvtnorm Rcpp RcppArmadillo statmod]; }; PCPS = derive2 { name="PCPS"; version="1.0.7"; sha256="0gxymz0yws1q1bxkpxi0lmbv57xx62h3dl7z3i2cnbagswkax3zh"; depends=[ape nlme phylobase picante RcppArmadillo SYNCSA vegan]; }; + PCRedux = derive2 { name="PCRedux"; version="1.1"; sha256="0714q5afki3i8vja3qakzjx7r082m99zhsimzlsqjhq4fa3jb8q2"; depends=[bcp changepoint chipPCR ecp fda_usc MBmca pbapply pracma qpcR robustbase segmented shiny zoo]; }; PCS = derive2 { name="PCS"; version="1.2"; sha256="0488h6s1yz6fwiqf88z2vgckn6i0kwls8cazmpw3wspnaqvl2n4s"; depends=[multtest statmod]; }; PCSinR = derive2 { name="PCSinR"; version="0.1.0"; sha256="1z8yjryw3c43vc6fxcwiindmyq6r63pc1zr3aybwmys6mv697bb4"; depends=[]; }; - PCovR = derive2 { name="PCovR"; version="2.7"; sha256="00920h0qlw81vwh46inmvm4mdv0dfd8xvqvrj7l038hhmjb7qsjz"; depends=[GPArotation MASS Matrix ThreeWay]; }; - PDE = derive2 { name="PDE"; version="1.1.2"; sha256="0hmi3mfs9bab0irn682jla4bqiq1fibi4lw3806wl2pmwdf071jj"; depends=[tcltk2]; }; - PDFEstimator = derive2 { name="PDFEstimator"; version="0.1-3"; sha256="0baqysb01xii86akbdq8yix1qrrqqfiyzrpb50jxd7y782xalcly"; depends=[]; }; + PCovR = derive2 { name="PCovR"; version="2.7.1"; sha256="1lvj3kf4pnvbr7lk3kzvh72akga49zx25b3w7nq24925s129sqx1"; depends=[GPArotation MASS Matrix ThreeWay]; }; + PDE = derive2 { name="PDE"; version="1.2.1"; sha256="0n7s1f97cszw6f3l3654chvi96j4anhykcm41gikc4lli8k8pgrw"; depends=[tcltk2]; }; + PDFEstimator = derive2 { name="PDFEstimator"; version="2.2"; sha256="0jmbf0js463fdrbs8m56alsiyiggq2h5kgqqkm7j55mn657bpzyz"; depends=[]; }; PDM = derive2 { name="PDM"; version="0.1"; sha256="1pbdy13ji9c6krgh2r1qgrzmf4hdmrdzylsr71n3hh5jq4n9xg8x"; depends=[jpeg]; }; PDN = derive2 { name="PDN"; version="0.1.0"; sha256="082ydvwcjc2rs7hlakrkgbbm9c419m408a14a9dgfdwm16yif3jd"; depends=[ggplot2 glmnet network survival]; }; PDQutils = derive2 { name="PDQutils"; version="0.1.6"; sha256="0mmfi0ifwbkjm0274sddpwkj27cvdkwngnka8vdmfm4b2nn7vgsp"; depends=[moments orthopolynom]; }; PDSCE = derive2 { name="PDSCE"; version="1.2"; sha256="17lc6d8ly6jbvjijpzg45dvqrzrh5s1sp415nycazgpbg9ypwr2h"; depends=[]; }; PDShiny = derive2 { name="PDShiny"; version="0.1.0"; sha256="0s09sywvy83dj06rkxzyi06wfymwnfpgf3lpgjbb8ps8q3byd4vs"; depends=[shiny]; }; + PEACH = derive2 { name="PEACH"; version="0.1.1"; sha256="0ciq2cci35rv39pgpp7i30jxlmr85726kh07ww22ryq3bm04ylg8"; depends=[MASS metap mnormt]; }; PEGroupTesting = derive2 { name="PEGroupTesting"; version="1.0"; sha256="1z863ard0cc2g8ibxnmxhiqhvs53r6b8gpnavnfchm9432ifcbwi"; depends=[]; }; PEIP = derive2 { name="PEIP"; version="2.2-3"; sha256="1ljalgffgrn9l3q914jjxrn1j740jqk4j8q1vzn3si4np9mz92vp"; depends=[bvls fields geigen Matrix pracma RSEIS]; }; PELVIS = derive2 { name="PELVIS"; version="2.0.2"; sha256="07lb0vfi6szcbznd7ylqmk02l6w02b5v26i9vbwkvpy71nzvvfxd"; depends=[DT MASS shiny]; }; PEMM = derive2 { name="PEMM"; version="1.0"; sha256="18dd9hsbdrnhrrff7gpdqrw2jv44j8lg0v3lkcdpbd4pppcaq84h"; depends=[]; }; + PERMANOVA = derive2 { name="PERMANOVA"; version="0.1.0"; sha256="02j9xsb35nycchxqq9hpcm4n433h0k9rnxb3544khb73a4ifszha"; depends=[deldir MASS Matrix scales xtable]; }; PGEE = derive2 { name="PGEE"; version="1.5"; sha256="1qcxbqnbpplnfjy83nm9fj9y4abzgbxnsggzx7ix3vb9qs18cdwh"; depends=[MASS mvtnorm]; }; PGM2 = derive2 { name="PGM2"; version="1.0-1"; sha256="03282pcq7gw47awc2mxjsbz6w3zpqjhqd7fzg8la4p00cd0vvmr4"; depends=[]; }; - PGRdup = derive2 { name="PGRdup"; version="0.2.3.6"; sha256="0bv3fzkylg70yhvyar1lbpwicli479ql1zfascjv60pic5ia1bc7"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; + PGRdup = derive2 { name="PGRdup"; version="0.2.3.7"; sha256="0zm0cm98nps2bfr66mb4j7a0v3s407zqrl2l2nvzg9yyqlaznzc3"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; PHENIX = derive2 { name="PHENIX"; version="1.3.1"; sha256="1gd9ycrwawi81al4f5v559km1112giwqnwvvk8ynj4kdb5bqpyq4"; depends=[ppcor SuppDists]; }; PHEindicatormethods = derive2 { name="PHEindicatormethods"; version="1.3.2"; sha256="193fc3l1zbbrnr4jl07bxv8jssyhpgh9aydi6f4w8mh56x9nazhk"; depends=[broom dplyr purrr rlang tibble tidyr]; }; - PHInfiniteEstimates = derive2 { name="PHInfiniteEstimates"; version="1.6"; sha256="1dlmsj5i9f0h91vq5g2kqh4xk38vbc9cszk6075y2flnh5aiv759"; depends=[coxphf lpSolve mlogit Rdpack survival]; }; + PHInfiniteEstimates = derive2 { name="PHInfiniteEstimates"; version="1.9"; sha256="1jgd82kfc36q6l7f65lksv79aqfdk0c1vglfh2dikvcz60di5nph"; depends=[coxphf lpSolve mlogit Rdpack survival]; }; + PHSMM = derive2 { name="PHSMM"; version="1.0"; sha256="1phfdzhfdhyry11plfd8a2lcn3rg02m84brw7fp2lg3hsxjg5ch7"; depends=[Rcpp RcppArmadillo]; }; PHYLOGR = derive2 { name="PHYLOGR"; version="1.0.11"; sha256="1fq2ny093b4881nwgj6wr8qd5g4dcxb51sdx40ndyxxpq6jj16n9"; depends=[]; }; PHeval = derive2 { name="PHeval"; version="0.5.4"; sha256="06fy5dm4mnp29f01163rw1d1hyl7rlcp4pfw18s87ckpr931qyma"; depends=[survival]; }; PIGShift = derive2 { name="PIGShift"; version="1.0.1"; sha256="115dnsh4b1rxx1d2kc8x3vl5366h5f0i6gg8l1w3v0f8309qigis"; depends=[ape mvtnorm]; }; PINSPlus = derive2 { name="PINSPlus"; version="2.0.5"; sha256="1j44ha8saszw0faxkp2887hhvba9i0m8pcq6bf76190924fq305g"; depends=[cluster doParallel entropy FNN foreach irlba matrixStats mclust Rcpp RcppArmadillo RcppParallel]; }; PIPS = derive2 { name="PIPS"; version="1.0.1"; sha256="1c5v3s6xys9p1q32k6mpsffhi9gwsq951rh12hs76dmak862yspc"; depends=[]; }; PK = derive2 { name="PK"; version="1.3-5"; sha256="1wzz2qv6h6nc2hcsg4098951i608xbbhc9f9ngamfigh5sbmzbh6"; depends=[]; }; - PKI = derive2 { name="PKI"; version="0.1-7"; sha256="1y02s9g883b2i0ma5n4bz2ik06b9y7y75yhcdilmln2f9p9jyrr1"; depends=[base64enc]; }; + PKI = derive2 { name="PKI"; version="0.1-8"; sha256="0qk75ml1xpai8hbh9d73rb0w0gwd559dr62ak8kj8q2ppw5vsfa5"; depends=[base64enc]; }; PKNCA = derive2 { name="PKNCA"; version="0.9.4"; sha256="01qipd6liy3fqx96v6hp288drgv6cqmhipbacyh18zi5pifv9hdp"; depends=[digest dplyr nlme rlang tidyr]; }; PKPDmodels = derive2 { name="PKPDmodels"; version="0.3.2"; sha256="1h893civ77ahbgjnc6kq3l7rszmqmx9dlxwavldigpq3r79vd86k"; depends=[]; }; PKconverter = derive2 { name="PKconverter"; version="1.5"; sha256="1zk2sjrjhq7n2k2p29r2qc6qdghr3riyjvvawz0g74lidg7hm1ly"; depends=[shiny shinydashboard shinythemes]; }; PKreport = derive2 { name="PKreport"; version="1.5"; sha256="16hss9migbxpnw5f9gcw1nlvb81iyji00ylx5wd6kdwhz0ids9wj"; depends=[ggplot2 lattice]; }; PLIS = derive2 { name="PLIS"; version="1.1"; sha256="0b81s7677wglqvv1b5lx8k2iaks09kz0wrl07245a7j2pk9nxv7p"; depends=[]; }; PLMIX = derive2 { name="PLMIX"; version="2.1.1"; sha256="05mnzsi7y71cvg50qx8hp4m31gqslldl34k41r1f8npyb6ldpdca"; depends=[abind coda foreach ggmcmc ggplot2 gridExtra gtools label_switching MCMCpack PlackettLuce pmr prefmod radarchart rankdist rcdd Rcpp reshape2 StatRank]; }; - PLNmodels = derive2 { name="PLNmodels"; version="0.10.6"; sha256="1rjryyw9zydcqaak72xv8x0gjybl7aan1n52jxj9m5672sw3knwr"; depends=[corrplot dplyr ggplot2 glassoFast gridExtra igraph magrittr MASS Matrix nloptr R6 Rcpp RcppArmadillo tidyr]; }; + PLNmodels = derive2 { name="PLNmodels"; version="0.11.4"; sha256="13yv6jwayl9d6iwllidn7hh52nybajvwfxg71dy4dh5y3lxpr0ib"; depends=[corrplot dplyr future future_apply ggplot2 glassoFast gridExtra igraph magrittr MASS Matrix nloptr purrr R6 Rcpp RcppArmadillo rlang tidyr]; }; PLRModels = derive2 { name="PLRModels"; version="1.1"; sha256="0dwnzfw7a1cxz9s00kxf19jmjsc8cy6cc9q2mjqf8z7690wrg7hb"; depends=[]; }; PLSbiplot1 = derive2 { name="PLSbiplot1"; version="0.1"; sha256="1l8d1k913ic0qwxvrrd447p5ni3mzc6v9lv45b7vqrpzkxdci6gy"; depends=[]; }; PLmixed = derive2 { name="PLmixed"; version="0.1.5"; sha256="03ivginsg1zhdxv5bzzmh6mxjz2b6qi8p4cq7sfm5q4llkld46x6"; depends=[lme4 Matrix numDeriv optimx]; }; PLordprob = derive2 { name="PLordprob"; version="1.1"; sha256="1g23h3121g9csr85falm6vgzbva42wz3skhfr2rxmvlc3ca4afyp"; depends=[mnormt]; }; PMA = derive2 { name="PMA"; version="1.2.1"; sha256="1rhiylm3jfarnqdkv7nwg536sgsa30ic80dk9byks9w0wf4mn59s"; depends=[]; }; PMCMR = derive2 { name="PMCMR"; version="4.3"; sha256="09bvdj2h1086r2cgy3myrhlylplxxlliv8nwx09c8kb1vn02i2ij"; depends=[]; }; - PMCMRplus = derive2 { name="PMCMRplus"; version="1.7.1"; sha256="1njyxm69kmparzsawqnm3mjad181pf2fgn3fc4wslls96bcngyrw"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; + PMCMRplus = derive2 { name="PMCMRplus"; version="1.9.0"; sha256="11vqz2pqjg5id2r19x5x56riddj6ni8qwh2g8yb6681l13wjkqa3"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; PML = derive2 { name="PML"; version="1.2"; sha256="0r4mfnkbg7chrnm3lb78hjcz25fal6vvvqwvnzvicl46mdhl94yb"; depends=[dplyr rbokeh tibble tidyr]; }; - PMwR = derive2 { name="PMwR"; version="0.15-0"; sha256="1xj2j72j907yayxshfckq2pycj9cxiakyz4kdr4xg9wqificivcw"; depends=[datetimeutils fastmatch NMOF orgutils textutils zoo]; }; - PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.6.1"; sha256="0hj7c1d1l6zxfpba2mjhapwx8kpqx89kbp0gzic8mbyn354p4fxn"; depends=[dplyr magrittr RCurl readr readxl survey tibble timeDate]; }; - PNSIBGE = derive2 { name="PNSIBGE"; version="0.1.0"; sha256="19z7yv91f3v992k74sl5g91czcyzr12khr83xhxr5m53qwbs84yj"; depends=[dplyr magrittr RCurl readr readxl survey tibble timeDate]; }; + PMwR = derive2 { name="PMwR"; version="0.16-0"; sha256="167npqrmclvn1sawrcpwi40k3xrxww48i2cbvs33njyfrq2k8shb"; depends=[datetimeutils fastmatch NMOF orgutils textutils zoo]; }; + PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.6.4"; sha256="0vy3cm68k21lwmdxi5j5k3dwgfc36xisf4s3y0vha82rj4naw3vs"; depends=[dplyr httr magrittr projmgr RCurl readr readxl survey tibble timeDate]; }; PNWColors = derive2 { name="PNWColors"; version="0.1.0"; sha256="1phplnclkficfv8s6wsyrckk4ixzbayiy5iix6dddg40485l9nyj"; depends=[]; }; PO_EN = derive2 { name="PO.EN"; version="1.0"; sha256="1b4vcj6dnfji99nlskjvls996cmb1b2s3mfdammi07sdx625pvji"; depends=[glmnet pROC PUlasso Rcpp RcppArmadillo]; }; POCRE = derive2 { name="POCRE"; version="0.5.0"; sha256="0aph1lmb0xkzm4l4ah2wrx13d138igf4k4w9wb9lca4vv6m7xzqf"; depends=[EbayesThresh ggplot2 pracma]; }; POD = derive2 { name="POD"; version="1.2.0"; sha256="1xg2xzfmzg2qrwd02xy4fwsfmccigw6lm5266z6w1kxzb7p7bbw0"; depends=[]; }; POET = derive2 { name="POET"; version="2.0"; sha256="0w3jhj45sxisyrpcsazbrbcsz7rmraw71jjm0zixbcgc4klb98ar"; depends=[]; }; - POFIBGE = derive2 { name="POFIBGE"; version="0.1.0"; sha256="1lpcas2x8lnrs8acxa05nl32khbx261rilnsq26ywm1fycyx2aaz"; depends=[dplyr magrittr RCurl readr readxl survey tibble timeDate]; }; + POFIBGE = derive2 { name="POFIBGE"; version="0.1.2"; sha256="03yqq4n0r4smmhqkq7s6q5q1dzimgfy5s9369fdwi9bpijk4arn9"; depends=[dplyr httr magrittr projmgr RCurl readr readxl survey tibble timeDate]; }; POINT = derive2 { name="POINT"; version="1.1"; sha256="0bkrsvcmm7927d7c56wr804a2wv5c1dn8y8zhf76433ckj45068x"; depends=[CompQuadForm Matrix rARPACK]; }; POMaSPU = derive2 { name="POMaSPU"; version="1.0.0"; sha256="0jz3jgzdykv0xvfw3ix0hbs32as6dp7p5v8bj5nddknx10d0siya"; depends=[MASS matrixStats Rcpp RcppArmadillo]; }; POPdemog = derive2 { name="POPdemog"; version="1.0.3"; sha256="0j83c853ligmw8ag4pb0vj46sfn2w2ynh4wvgkabzs688hxxni8r"; depends=[]; }; + POSTm = derive2 { name="POSTm"; version="1.1"; sha256="0ax0ky2xbaymw4fdipxvy1gh5wfnnm8hwxcg6hksasaz366widhm"; depends=[ape CompQuadForm]; }; + POSetR = derive2 { name="POSetR"; version="1.0.3"; sha256="19r73q7g8jxlq05lrc1mhd0qb1cw7hppsnz6f3410p5wwmvvvaxp"; depends=[igraph Rcpp Rdpack]; }; POT = derive2 { name="POT"; version="1.1-7"; sha256="1xxm293lmj22dsiaimivpd90xpwnrr36xa371zg6k6w05q4jjfn3"; depends=[]; }; POUMM = derive2 { name="POUMM"; version="2.1.7"; sha256="0pwa97sffb571nfqnbc35dj9lr8z07wjsjnwibj9dhj2dr5b2cfp"; depends=[adaptMCMC ape coda data_table foreach ggplot2 lamW Rcpp]; }; POV = derive2 { name="POV"; version="0.1.4"; sha256="0mqhi410rwpgr6x5h57wqg0f5k01vva0c280zlfpmf8php121x7j"; depends=[broom formula_tools]; }; @@ -3206,16 +3312,15 @@ in with self; { PPCI = derive2 { name="PPCI"; version="0.1.5"; sha256="141811iq0g2rq7lxpz9a44kyjfylj85yqgcjq7b23xfg2wbcp8dd"; depends=[rARPACK]; }; PPMR = derive2 { name="PPMR"; version="1.0"; sha256="07fky5xc1dmmn23wwdjm46c86i7q20dv5f2147828v52hhky873g"; depends=[Rcpp RcppArmadillo]; }; PPQplan = derive2 { name="PPQplan"; version="1.1.0"; sha256="072r7myqsnpyla37q6bj9glwvbygb9g8xkl60q055yzxmfh4rsbr"; depends=[ggplot2 plotly]; }; - PPRL = derive2 { name="PPRL"; version="0.3.5.2"; sha256="083al6xi9b62vbx71684bxq2xynvmxw25ak01gwngln1r84gsz5l"; depends=[Rcpp settings]; }; + PPRL = derive2 { name="PPRL"; version="0.3.6"; sha256="08z7fnvz9wdsdba6n19qxg6n32azka9890w16jj7qpv25bpkqvl1"; depends=[Rcpp settings]; }; PPTcirc = derive2 { name="PPTcirc"; version="0.1.0"; sha256="082w0p8f1yacqjid017hhkk2946z7g5wf86af01cb26dhss0y9sy"; depends=[circular progress]; }; PPforest = derive2 { name="PPforest"; version="0.1.1"; sha256="0iplbw5b2vhqbp6gc123ykzmilwa80akljkv3jzfmi90ckm4k08m"; depends=[doParallel dplyr magrittr plyr Rcpp RcppArmadillo tidyr]; }; - PPtree = derive2 { name="PPtree"; version="2.3.0"; sha256="002qjdx52r2h90wzrf2r3kz8fv3nwx08qbp909whn6r4pbdl532v"; depends=[MASS penalizedLDA]; }; PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.4"; sha256="008hlgi56p9wydpsb2f1dxi4slml7p417c34lw00hivbl53d6x97"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; }; PQLseq = derive2 { name="PQLseq"; version="1.2"; sha256="0md6s7yb24zq74b12ackhh1yggyfsg3226acwfaf1pb3l4yvway4"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo]; }; PRDA = derive2 { name="PRDA"; version="1.0.0"; sha256="1lklwfakd54ylm5gizq36ng6498c2izapsz9yz2a95cjf860rr23"; depends=[MASS pbapply Rcpp RcppArmadillo]; }; PREPShiny = derive2 { name="PREPShiny"; version="0.1.0"; sha256="0zsg07y6nhp2lma3pdz8xd981y3mh8k21il5jv0inma1d1xr4g3f"; depends=[dplyr psycho rmarkdown shiny]; }; PRIMAL = derive2 { name="PRIMAL"; version="1.0.2"; sha256="04fn0c10v9ai7vrrd4qr84rid3x42wq749rn5p1i6nkvmjv3dnhs"; depends=[Matrix Rcpp RcppEigen]; }; - PRIMME = derive2 { name="PRIMME"; version="3.1-3"; sha256="0afncp0grxr1hb1ymqq8gigl5cvq1wb0vjnxsc8nh39jqsw08cjx"; depends=[Matrix Rcpp]; }; + PRIMME = derive2 { name="PRIMME"; version="3.2-1"; sha256="13a62x095fm5sz02hdsb2x7msdp4arf8lcy94br2bdd1yc96q79z"; depends=[Matrix Rcpp]; }; PRISM_forecast = derive2 { name="PRISM.forecast"; version="0.2.1"; sha256="07kq6fprbj8zccs6cx1aiy5mrcg77b0fh42zvg2pimbvr8cqhy31"; depends=[glmnet xts zoo]; }; PRISMA = derive2 { name="PRISMA"; version="0.2-7"; sha256="0sk2d07m8rhipa0kdbaf8ngryda6f1ihp5akpnyw2llajf0x8as5"; depends=[ggplot2 gplots Matrix]; }; PRISMAstatement = derive2 { name="PRISMAstatement"; version="1.1.1"; sha256="1vvab8h71g8c910s2h4d12qafqdncfzmsh5f1b4m79plpqi3s49z"; depends=[DiagrammeR]; }; @@ -3227,10 +3332,10 @@ in with self; { PROreg = derive2 { name="PROreg"; version="1.1"; sha256="0jws41hgrpcih5ispp6f627f81sjbdygzgjbw4gawf31n5z8pi5a"; depends=[car fmsb Matrix matrixcalc numDeriv RColorBrewer rootSolve]; }; PROscorer = derive2 { name="PROscorer"; version="0.0.1"; sha256="0mgj0mi0vzdk0agimsx4k9i4bss0j5lqiayzhldr1hrqrx2a4f3d"; depends=[PROscorerTools]; }; PROscorerTools = derive2 { name="PROscorerTools"; version="0.0.1"; sha256="1vliffkfqdn5l96bncfgayv19i20kmawlxi8q853wamj6npdpv5r"; depends=[]; }; - PROsetta = derive2 { name="PROsetta"; version="0.2.1"; sha256="0lw6biwjrb54b69mq6dj7jmvlpya47n33wvksbqky2pkvgk3iqyj"; depends=[equate lavaan mirt mvnfast plink psych]; }; + PROsetta = derive2 { name="PROsetta"; version="0.3.0"; sha256="0w4zr4m50k013lc50k6g8wa5aqynsxa3m1pkachx71pwni6sjcqq"; depends=[equate lavaan mirt mvnfast plink psych]; }; PRROC = derive2 { name="PRROC"; version="1.3.1"; sha256="1m28h8pcd78049lz2qixhkcr9h5b3jik3maqzfbvq9y58z71i4a7"; depends=[]; }; - PRSim = derive2 { name="PRSim"; version="1.2-2"; sha256="0amvri7s32zrzc7a6lldwhpfsi0z92k3ps0rzlgys57dhpzl0mfs"; depends=[goftest homtest splus2R wavScalogram]; }; - PReMiuM = derive2 { name="PReMiuM"; version="3.2.3"; sha256="1znr1swz73n1ws657dvv56y6crmqicfllbz460vaw8a0dnjiqsc9"; depends=[ald BH cluster data_table gamlss_dist ggplot2 plotrix Rcpp RcppEigen rgdal spdep]; }; + PRSim = derive2 { name="PRSim"; version="1.3-1"; sha256="1iq81vdxwd504cqjn243hs8x8ph7yvf06gj4amf7cgg1j6862d35"; depends=[goftest homtest lmomco mev splus2R wavScalogram]; }; + PReMiuM = derive2 { name="PReMiuM"; version="3.2.6"; sha256="15m37k8pnc4i4gb0mgk7xas0amkg2iqb9xy5wnwmgpa0vmxy0nn4"; depends=[BH cluster data_table gamlss_dist ggplot2 plotrix Rcpp RcppEigen rgdal spdep]; }; PResiduals = derive2 { name="PResiduals"; version="1.0-0"; sha256="0rfi8y12cz6h8bm9715ppq3px4g123k0rlrri4py8brca40smb69"; depends=[Formula MASS rms SparseM]; }; PSAgraphics = derive2 { name="PSAgraphics"; version="2.1.1"; sha256="05c0k94dxddyrhsnhnd4jcv6fxbbv9vdkss2hvlf3m3xc6jbwvh9"; depends=[rpart]; }; PSCBS = derive2 { name="PSCBS"; version="0.65.0"; sha256="16irvlc3ds7p03racjzyljqsc43bbwng3zsb0bmrkibmadfhcr9k"; depends=[aroma_light DNAcopy future listenv matrixStats R_cache R_methodsS3 R_oo R_utils]; }; @@ -3238,18 +3343,18 @@ in with self; { PSIMEX = derive2 { name="PSIMEX"; version="1.1"; sha256="0cndzasvg4y49incyd9nfz8y3z88ywbc7xk0zzjir665pv2xn23b"; depends=[knitr MCMCglmm pedigree plotrix]; }; PSLM2015 = derive2 { name="PSLM2015"; version="0.2.0"; sha256="1f8kzlqil2ac8a9fbj9fhdni2narh2yaaz044mlx7gsv2ns3ai19"; depends=[dplyr ggplot2 magrittr]; }; PSPManalysis = derive2 { name="PSPManalysis"; version="0.3.4"; sha256="1w51b0dck9b14vnk91ihrm3z574m65b7mdi29jwjsj5v0vh1gang"; depends=[pkgbuild rstudioapi]; }; - PSS_Health = derive2 { name="PSS.Health"; version="0.1.5"; sha256="0rbxr1rkv9549w9yj2hg143w5izcx3i9f1jiqk5s1vbpdrhwxyq6"; depends=[DT easypower EnvStats ICC_Sample_Size kappaSize longpower MESS plotly powerMediation powerSurvEpi presize pROC pwr pwr2 shiny shinycssloaders shinyFeedback shinyhelper shinythemes tidyverse TrialSize WebPower writexl]; }; + PSS_Health = derive2 { name="PSS.Health"; version="0.1.6"; sha256="00irpkq0py5sw0r3y1krmkav6xv6kmiirf7m737v0k4pr62wq659"; depends=[DT easypower EnvStats epiR ICC_Sample_Size kappaSize longpower plotly powerMediation powerSurvEpi presize pROC pwr pwr2 shiny shinycssloaders shinyFeedback shinyhelper tidyverse writexl]; }; PSSIM = derive2 { name="PSSIM"; version="0.1.0"; sha256="144lh31b1c4ycq0wrgf9745q0c8b5sfnmrd0f7vwx95i86bzr3mj"; depends=[]; }; PSSMCOOL = derive2 { name="PSSMCOOL"; version="0.2.1"; sha256="0ixxaxgpngi27r3zpqzrk5df8aqmrs4iwiyfrgg1ab1kjd1hnpk4"; depends=[dtt gtools infotheo phonTools]; }; PST = derive2 { name="PST"; version="0.94"; sha256="0f28zrnlficbi9iil6wbh51k9mghpkz63hw05lpmlpx1yl5nd0a6"; depends=[RColorBrewer TraMineR]; }; PSW = derive2 { name="PSW"; version="1.1-3"; sha256="0ahm7rp795d7j88n15b3q0gl573p3g0krc7jd1zv87g4bsdc9b5x"; depends=[gtools Hmisc]; }; - PSweight = derive2 { name="PSweight"; version="1.1.2"; sha256="0aa2lbnank1ivqis8l5z3gch6j0awrzvcyhixsp1mjaxz5izd2yn"; depends=[ggplot2 MASS nnet numDeriv]; }; + PSweight = derive2 { name="PSweight"; version="1.1.4"; sha256="06na7w1wdh4f1qlhiazsl192ap4rz6anp108s3g7p5prw0lxq1j1"; depends=[gbm ggplot2 MASS nnet numDeriv SuperLearner]; }; PTAk = derive2 { name="PTAk"; version="1.3-34"; sha256="0ylnag492v1n0pmzsz73w12frhv8c3r3dxgarf58ny0ir0i0ywvl"; depends=[tensor]; }; PTE = derive2 { name="PTE"; version="1.7"; sha256="1azkrij4kfmvp03lnzm88gwgvz8g54jq94j0qg8ynxvyjzrppc98"; depends=[doParallel foreach survival]; }; - PTXQC = derive2 { name="PTXQC"; version="1.0.8"; sha256="0x3jp829nw4mp2mc1damvbyxsjfp8m21yn3an3m6f6rj3mlk8p30"; depends=[data_table ggdendro ggplot2 gtable kableExtra knitr plyr RColorBrewer reshape2 rmarkdown seqinr UpSetR yaml]; }; + PTXQC = derive2 { name="PTXQC"; version="1.0.9"; sha256="195zw3c5lvgp5237anj37wzqj9wnkpvabqr1q3whj0lvh01lpghb"; depends=[data_table ggdendro ggplot2 gtable jsonlite kableExtra knitr ontologyIndex plyr RColorBrewer reshape2 rmarkdown seqinr UpSetR yaml]; }; PTwins = derive2 { name="PTwins"; version="0.1.1"; sha256="166mc7w52n9d3n72h5jvvhbki87prkils3yigdf57dn9pyixrd66"; depends=[]; }; PUPAIM = derive2 { name="PUPAIM"; version="0.2.0"; sha256="1ky6f4yhm3hjrfxwk8vfalzzjgkq1922my26w457q8nfng7f2m53"; depends=[Metrics minpack_lm nls2]; }; - PUlasso = derive2 { name="PUlasso"; version="3.2.3"; sha256="07jf81q898833qswwairkv21dxlz7890219fdgnw3ywgp5kvlp41"; depends=[doParallel foreach ggplot2 Matrix Rcpp RcppEigen]; }; + PUlasso = derive2 { name="PUlasso"; version="3.2.4"; sha256="0mcmya0a5wzmssq05vpmkx9icfrq49kc0dc9ri3d9kx4w0sabffh"; depends=[doParallel foreach ggplot2 Matrix Rcpp RcppEigen]; }; PVAClone = derive2 { name="PVAClone"; version="0.1-6"; sha256="0fj5p3z2cwnyshrr4rq88wpij2xax5p4aq0x4p342kadx9d6x2ga"; depends=[coda dclone dcmle]; }; PVR = derive2 { name="PVR"; version="0.3"; sha256="0pcnazkiwmicr3k6k70r8skqk0pd46fcqhhxghawxjs4slgnygkj"; depends=[ape MASS splancs]; }; PVplr = derive2 { name="PVplr"; version="0.1.0"; sha256="1ssmdhq2qczk6n50f8jj4j3nym7jj9bshfc1f29lccvmp7wxdp9a"; depends=[broom cluster dplyr ggplot2 magrittr minpack_lm purrr rlang segmented stlplus tidyr]; }; @@ -3263,8 +3368,8 @@ in with self; { PakPC2017 = derive2 { name="PakPC2017"; version="1.0.0"; sha256="196jvhv7pv4pvnnz9izk6icxv3aml26mif0w6g4907izyszf8cal"; depends=[dplyr magrittr]; }; PakPMICS2014Ch = derive2 { name="PakPMICS2014Ch"; version="0.1.0"; sha256="0gjrx34613d9wzal292zfzh8hmkav271fqb0skdxd1f8rs2c79dg"; depends=[data_table]; }; PakPMICS2014HH = derive2 { name="PakPMICS2014HH"; version="0.1.0"; sha256="1n6cyanqafscizgi1xqmc19w59yigxk5mvqinbivpdr7rydhrac6"; depends=[data_table]; }; - PakPMICS2014HL = derive2 { name="PakPMICS2014HL"; version="0.1.0"; sha256="18i5p54zmqxph0lkbgz4ahrbmi2jwhjwdca7aqvx9az18ki5c9sx"; depends=[data_table]; }; - PakPMICS2014Wm = derive2 { name="PakPMICS2014Wm"; version="0.1.0"; sha256="1sczczk07n91c21iqkxz1j1hixrk6p0c30ggahxbmk1cawqfn4cb"; depends=[data_table]; }; + PakPMICS2014HL = derive2 { name="PakPMICS2014HL"; version="0.1.1"; sha256="0famy09rh8grcyymh1nlrxk35cdkxcwipqbvf4jcixkfvzw8fhjk"; depends=[data_table]; }; + PakPMICS2014Wm = derive2 { name="PakPMICS2014Wm"; version="0.1.1"; sha256="1ni3a487chaixhbyzd5frr4rfjmf4vgnp1gbkqgqmir8a5m53rkf"; depends=[data_table]; }; PakPMICS2018 = derive2 { name="PakPMICS2018"; version="1.0.0"; sha256="0jjch9nhwif01j6avbyr4ajpfnxb51idq6pnywfjhn46wn0by756"; depends=[tibble]; }; PakPMICS2018bh = derive2 { name="PakPMICS2018bh"; version="0.1.0"; sha256="0c1fy4mp45nay15plpfzv4xjx1dw17zrrild70sfbrmdfdwnjgcl"; depends=[tibble]; }; PakPMICS2018fs = derive2 { name="PakPMICS2018fs"; version="0.1.0"; sha256="009hx1r9a0q0xxrk5zsy39sj1ynj5qjvci37i82yihjvjxb3rj0g"; depends=[tibble]; }; @@ -3274,25 +3379,25 @@ in with self; { PamBinaries = derive2 { name="PamBinaries"; version="1.4.0"; sha256="09b1964k5fipilzzfn8fzrpa29wdbakprzd7gcz04ba29jp1f89g"; depends=[dplyr ggplot2]; }; PanCanVarSel = derive2 { name="PanCanVarSel"; version="0.0.3"; sha256="06xkzg2kvyr6ivm1z71x2pk20j37h36sx6kf4kmc8q50cq73k9jl"; depends=[Matrix msm mvtnorm smoothmest]; }; PanJen = derive2 { name="PanJen"; version="1.6"; sha256="18cl9rls98v286kk6lyxxws3w59zpzgmqi5250gdgcf71xy2lhvm"; depends=[mgcv]; }; - PandemicLP = derive2 { name="PandemicLP"; version="0.2.0"; sha256="1icqg6a3nfxjnr5r02ndx4gbz88flf9agash5pb6jvzwjw14bl4f"; depends=[BH curl dplyr plotly Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders tidyr]; }; + PandemicLP = derive2 { name="PandemicLP"; version="0.2.1"; sha256="1ilxxzbynh7dmc9lmyzp1hb3305w9fgvrabm1q5pxa46l41z40dc"; depends=[BH curl dplyr plotly Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders tidyr]; }; PanelCount = derive2 { name="PanelCount"; version="1.0.9"; sha256="1b6c83qypjc3ylvhh24xm4pjk8w34s24v0i9ddlmg92f1518hlkj"; depends=[Rcpp RcppArmadillo statmod]; }; PanelMatch = derive2 { name="PanelMatch"; version="1.0.0"; sha256="02nsi5bhzqdn3v164f70xs0lll929gi602jw2b1xza7wcszdchfd"; depends=[CBPS data_table ggplot2 MASS Matrix Rcpp RcppArmadillo RcppEigen]; }; Paneldata = derive2 { name="Paneldata"; version="1.0"; sha256="00hk340x5d4mnpl3k0hy1nypgj55as2j7y2pgzfk3fpn3zls5zib"; depends=[]; }; PantaRhei = derive2 { name="PantaRhei"; version="0.1.2"; sha256="0lv04aa70yd5gr0zfh2gmah4d4h3kw0lym6284akcvll8mhdi8dd"; depends=[]; }; - ParBayesianOptimization = derive2 { name="ParBayesianOptimization"; version="1.2.1"; sha256="13zsmhbfgxg6ip1zmq24hgj9y5b2h67vlbpdk7rgcj3li3m894kc"; depends=[crayon data_table dbscan DiceKriging foreach ggplot2 ggpubr lhs plotly]; }; + ParBayesianOptimization = derive2 { name="ParBayesianOptimization"; version="1.2.4"; sha256="0x6r54gawbfa75qmadhbxw9mgbinwxl84h54w6j6iwg3jbyrnzp8"; depends=[crayon data_table dbscan DiceKriging foreach ggplot2 ggpubr lhs]; }; ParDNAcopy = derive2 { name="ParDNAcopy"; version="2.0"; sha256="017xwznhfibi8kp0ifww02c0qcq0vxs06rjww4kcp2bvdmld8kc4"; depends=[DNAcopy]; }; ParallelDSM = derive2 { name="ParallelDSM"; version="0.1"; sha256="0pgkcc2a3k1h0n997m9x0zj4adv4i0q6qfh7m25l3f80kzlxhqdi"; depends=[caret geoR gstat quantregForest randomForest raster rgdal snowfall sp]; }; ParallelLogger = derive2 { name="ParallelLogger"; version="2.0.1"; sha256="0vvilx5rcr00nl9gsjynx6dddc692llq63v3mhj3zlmblifxwkyr"; depends=[jsonlite snow xml2]; }; ParallelPC = derive2 { name="ParallelPC"; version="1.2"; sha256="07y7xb16865khxkvwsk1yglzyy7ja4aj2wpkipaz48i77c3x8bi2"; depends=[]; }; ParallelTree = derive2 { name="ParallelTree"; version="0.1.3"; sha256="1h53qwhc63fglm452b3by7f3g6f3hyqwkmwmbdqdb9rv3j4gvnvg"; depends=[ggplot2]; }; ParamHelpers = derive2 { name="ParamHelpers"; version="1.14"; sha256="1sx2ddm8hwvvmk0z65wa689w80py3fny82zjd4d29qwxlv854xmi"; depends=[backports BBmisc checkmate fastmatch]; }; - Pareto = derive2 { name="Pareto"; version="2.2.1"; sha256="1n438xawc45l3maliw6p3rmp0a97i9wvjfzhvzdbs07ls160wb2d"; depends=[]; }; + Pareto = derive2 { name="Pareto"; version="2.4.2"; sha256="0396jixa4scqcgq8qyhin91mppg4knz2bfik67jh119clwdrd8vj"; depends=[]; }; ParetoPosStable = derive2 { name="ParetoPosStable"; version="1.1"; sha256="1fwji5wrhbxr089dll812csamvb5q2pxn1607rpirarifgfbj28m"; depends=[ADGofTest doParallel foreach lmom]; }; PartCensReg = derive2 { name="PartCensReg"; version="1.39"; sha256="0blzv57cbxqghkz4fc3plvrcw80g0kx17dzmajkfv598m1wm6hc8"; depends=[Matrix optimx ssym]; }; Partiallyoverlapping = derive2 { name="Partiallyoverlapping"; version="2.0"; sha256="0pb0digyigqyzb0zqikgz002kqf1xprcjhxr62a7iqbzy1yycayf"; depends=[]; }; PathSelectMP = derive2 { name="PathSelectMP"; version="1.1"; sha256="036b70bpylmibny6dny79f7gdzn78arqgl2hfs031vygw63yyh9b"; depends=[mice MplusAutomation]; }; PatternClass = derive2 { name="PatternClass"; version="2.0.1"; sha256="1xwlk6shms38nqxad3d15254wgnkfzy7jyf5w9bbm96kg05mndbz"; depends=[landscapemetrics raster]; }; - Patterns = derive2 { name="Patterns"; version="1.2"; sha256="1dfy0jxr4h17j00yf2lfxlczvx6sdjz08hqsrj6r26qz3g6f16br"; depends=[abind animation Biobase c060 cluster elasticnet glmnet gplots igraph jetset KernSmooth lars lattice limma magic Mfuzz movMF msgps nnls pixmap plotrix SelectBoost spls survival tnet VGAM WGCNA]; }; + Patterns = derive2 { name="Patterns"; version="1.3"; sha256="1jmj7jr7q5f6iqrrlv6dz0n2igbppnxfvbdh5nwf5bndyxlldqxn"; depends=[abind gplots igraph jetset KernSmooth lars lattice limma magic Mfuzz movMF msgps nnls plotrix SelectBoost survival tnet VGAM WGCNA]; }; PdPDB = derive2 { name="PdPDB"; version="2.0.1"; sha256="05aqg0rqrnlmvjxa32ms1vywgwhw5zlfkyf2ij0fn06rp8l2z3lv"; depends=[dendextend plyr tseries]; }; Peacock_test = derive2 { name="Peacock.test"; version="1.0"; sha256="0ypvwywipyh8lm8xkazsfjgjpvvyi2g8kid63qff11372p33m6xs"; depends=[]; }; PeakError = derive2 { name="PeakError"; version="2017.06.19"; sha256="1d4v7s478zjz42dm6ps4nnqqyyqv84dgmzn1bp1a4qwnfv9vmfg7"; depends=[]; }; @@ -3303,12 +3408,12 @@ in with self; { PearsonDS = derive2 { name="PearsonDS"; version="1.1"; sha256="0rqh9ji0bah3n1c6fcg7krgqs65qla9p3xrnc4jr7va6ph104im9"; depends=[]; }; PearsonICA = derive2 { name="PearsonICA"; version="1.2-4"; sha256="0jkbqha1nb9pf72ffki47wymsdmd50smkdhvpzvanv4y2rmqfhvg"; depends=[]; }; PedCNV = derive2 { name="PedCNV"; version="0.1"; sha256="09qxcjzwdgzdkbj28rzmfv7k3q2qsiapnvx3m45a835r57h5gynp"; depends=[ggplot2 Rcpp RcppArmadillo]; }; - PeerPerformance = derive2 { name="PeerPerformance"; version="2.2.2"; sha256="03vkdfwa4smlsycgsd1hmg4qzib5nyknrsz100rqdfdw4g2xn6bn"; depends=[lmtest sandwich]; }; + PeerPerformance = derive2 { name="PeerPerformance"; version="2.2.3"; sha256="19dvvl4q20zacpycxndvlck6h060gir07v2ag98bwn5p6dsg7ziq"; depends=[lmtest sandwich]; }; PenCoxFrail = derive2 { name="PenCoxFrail"; version="1.0.1"; sha256="0snjf8jxzyf30xj3wx9p6g073dqw592l1j1c6yxfg8y4kgzhzwq7"; depends=[Matrix Rcpp RcppArmadillo survival]; }; PenIC = derive2 { name="PenIC"; version="1.0.0"; sha256="0vcqawmbm8z6lkcxfq1b2png9viz5q669npbv0s7dn6smwhanlzz"; depends=[MASS Matrix numDeriv]; }; PepSAVIms = derive2 { name="PepSAVIms"; version="0.9.1"; sha256="0m4jrq6wcjy0k80gvrnm9f7kvi1ifx9182xfq0psyaxpj0ggvzij"; depends=[elasticnet]; }; Peptides = derive2 { name="Peptides"; version="2.4.3"; sha256="1ml1dnk4bigv9gfxx9xpxp9b8id2nid3gngmza9dz9zfcy5dbc1f"; depends=[Rcpp]; }; - PerFit = derive2 { name="PerFit"; version="1.4.3"; sha256="0qmh78wrx3vzz41z30db3bb62n325blphjhpzdzykfx77gr8plyr"; depends=[fda Hmisc irtoys ltm MASS Matrix mirt]; }; + PerFit = derive2 { name="PerFit"; version="1.4.5"; sha256="0ngxwr4gcamyxhn96mr1pl319fiwv2xzyrc7lhbwsx28b7rpqamc"; depends=[fda Hmisc irtoys ltm MASS Matrix mirt]; }; PerMallows = derive2 { name="PerMallows"; version="1.13"; sha256="0ny2vc8f0npixaw1kp2d93xr4g46nsg8jjwvi6afv9xjvaz0i6wy"; depends=[Rcpp]; }; Perc = derive2 { name="Perc"; version="0.1.5"; sha256="1097cdx69jliwk1d5yv6v0igmqk4dwgypcb4k9dnqla19rbxx8xc"; depends=[]; }; PerfMeas = derive2 { name="PerfMeas"; version="1.2.1"; sha256="1x7ancmb41zd1js24rx94plgbssyc71z2bvpic6mg34xjkwdjw93"; depends=[graph limma RBGL]; }; @@ -3318,12 +3423,15 @@ in with self; { PerseusR = derive2 { name="PerseusR"; version="0.3.4"; sha256="1k03flbnjndx5mm26hysk64z89858m50kjs8gyldm4s5f09iny6p"; depends=[Biobase plyr stringr XML]; }; PersianStemmer = derive2 { name="PersianStemmer"; version="1.0"; sha256="1dpfkafijg7g7hzka93l1ymq5rcnjsfgvkvbpdx3vjnid05kh4v1"; depends=[]; }; PersomicsArray = derive2 { name="PersomicsArray"; version="1.0"; sha256="1d5gxd65b01m13rgbdhk6w3l43vqcbdk0s1pbgc8h6cnipj55z0i"; depends=[jpeg raster stringr tiff]; }; + PesticideLoadIndicator = derive2 { name="PesticideLoadIndicator"; version="0.0.1"; sha256="1sac7a4dkm4qr6igdh4ba4f65c7f47m80lyr1gw39xb0ff806p0d"; depends=[readxl stringr]; }; PetfindeR = derive2 { name="PetfindeR"; version="2.1.0"; sha256="1pb3mqv4pxl971j210m7vwhz9qqbhb7l5fpmb1vjwkc5hx11zh9l"; depends=[R6]; }; PhViD = derive2 { name="PhViD"; version="1.0.8"; sha256="038pw24sb8ja8pbbmj05rww6413i2ljybb2dxwgrpffv22aqawmc"; depends=[LBE MCMCpack]; }; PharmPow = derive2 { name="PharmPow"; version="1.0"; sha256="0gabkd8p4zsig9p697lyk8m2jxb5abjk81rpzd5ih1yk1qanhsn5"; depends=[scatterplot3d]; }; Phase123 = derive2 { name="Phase123"; version="2.1"; sha256="0bz867wsnrflzlzrql1vgacymx70rb9wik9jw3g34i2vigpl8x8i"; depends=[Rcpp RcppArmadillo survival]; }; Phase12Compare = derive2 { name="Phase12Compare"; version="1.5"; sha256="0n9rjgdllpnj451a8d4p8x3mjf23czcmk7cn1c9v3l7mg4jn18h2"; depends=[mvtnorm Rcpp RcppArmadillo]; }; PheCAP = derive2 { name="PheCAP"; version="1.2.1"; sha256="00dfy0iby21kqfxz2npz4dn1klxcdlll8xrk2hsmc56fjfidbdhz"; depends=[glmnet RMySQL]; }; + PheNorm = derive2 { name="PheNorm"; version="0.1.0"; sha256="10223yfaajzq1ip5qj3kk6iyjzrbb619jkrsxawb0dpkrj56d8v7"; depends=[]; }; + PheVis = derive2 { name="PheVis"; version="1.0.2"; sha256="0pb6lxyz0ikgl64872dqjk1zj7pa793ggrp53hrg2y5m76wn8drr"; depends=[dplyr ggplot2 glmnet knitr lme4 purrr randomForest Rcpp tidyr viridis zoo]; }; Phenotype = derive2 { name="Phenotype"; version="0.1.0"; sha256="0bfg2vk35hrfzmpjpnv3yhnsfr17505c49msbppqrrbpw5wgawy5"; depends=[lme4 tidyr]; }; PhenotypeSimulator = derive2 { name="PhenotypeSimulator"; version="0.3.3"; sha256="1micildhgqx4h52927p68g6jvw2rif6maf90d3dzvn76ll2zbpwh"; depends=[cowplot data_table dplyr ggplot2 mvtnorm optparse R_utils Rcpp reshape2 snpStats zoo]; }; Phxnlme = derive2 { name="Phxnlme"; version="1.0.0"; sha256="0h9mi8p95rp1s8xsdv38j9fpy2cy9zvjnldjmnj0n469kimp2782"; depends=[ggplot2 gridExtra lattice manipulate testthat]; }; @@ -3331,11 +3439,11 @@ in with self; { PhyloMeasures = derive2 { name="PhyloMeasures"; version="2.1"; sha256="01axs78s10y1bkx8dbs9vvnphdzik7hpibkwyib1x9mznmyg90hr"; depends=[ape]; }; PhylogeneticEM = derive2 { name="PhylogeneticEM"; version="1.4.0"; sha256="14a1lczwr8xhv27wqc88raj3yhy8gvflvxjrx8f5hlq15y3wfp4w"; depends=[ape capushe foreach gglasso glmnet LINselect MASS Matrix plyr Rcpp RcppArmadillo robustbase]; }; PhysActBedRest = derive2 { name="PhysActBedRest"; version="1.1"; sha256="0ww9gcni9f0mwya1d3v45wazrss7lq8b75xcp4fb4kxwbh9s35kw"; depends=[chron lubridate stringr]; }; - PhysicalActivity = derive2 { name="PhysicalActivity"; version="0.2-2"; sha256="14z6plgwyr46vs9m997rvlz8sdglfs9g087an8668zqkzzs2w4ln"; depends=[]; }; + PhysicalActivity = derive2 { name="PhysicalActivity"; version="0.2-4"; sha256="0b27prkv3x6v2afz0y53ccs9scibpc7nj54n0hpd9fgn1wyg4c40"; depends=[]; }; PieceExpIntensity = derive2 { name="PieceExpIntensity"; version="1.0.4"; sha256="023hq0gg1vi0j3yf8p5lisgs8wfp5qwyd4akxxzx7wad2985gxb3"; depends=[Rcpp RcppArmadillo]; }; Pijavski = derive2 { name="Pijavski"; version="1.0.3"; sha256="0jspc19fn1mqv3zjr89sy7rqbbyjk3ij3rhrg2dsw167w63lpykx"; depends=[Rcpp]; }; - PivotalR = derive2 { name="PivotalR"; version="0.1.18.4"; sha256="18fnpa45q6zfndkb7p6nx7am3kfp6yx0cmvg13gafsaw7imf760y"; depends=[Matrix semver]; }; - PlackettLuce = derive2 { name="PlackettLuce"; version="0.3.1"; sha256="00qvcick4ph3awr46ihrd6m1zfr4h3pf9laisxl3x7yajdl9qgk8"; depends=[igraph Matrix partykit psychotools psychotree qvcalc RSpectra sandwich]; }; + PivotalR = derive2 { name="PivotalR"; version="0.1.18.5"; sha256="1xcr7769d9jixq0lbc89jqzzxnnzxb8gjlws2l6cjm40hcid2yc9"; depends=[Matrix semver]; }; + PlackettLuce = derive2 { name="PlackettLuce"; version="0.4.0"; sha256="048zajpv2lbsbzdya16lpk47xygjvmy3il3g8hfq255xwiv5v07k"; depends=[CVXR igraph Matrix partykit psychotools psychotree qvcalc R6 RSpectra sandwich]; }; PlaneGeometry = derive2 { name="PlaneGeometry"; version="1.2.0"; sha256="19ynvclgj2148gphqq825byj6xdvjr5i15h448505gv4j1viw0cx"; depends=[gsl R6 sdpt3r stringr uniformly]; }; Planesmuestra = derive2 { name="Planesmuestra"; version="0.1"; sha256="0v7l4hrfckcf7zmk0ihq2ij0qli7x12j17vd6752d1yjk27fgk57"; depends=[]; }; PlasmaMutationDetector = derive2 { name="PlasmaMutationDetector"; version="1.7.2"; sha256="0qra7q2pzw212qylyrfhv6zjcsldfw84b93cari0qjqnw4gyfph2"; depends=[GenomicRanges ggplot2 robustbase Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; @@ -3347,43 +3455,46 @@ in with self; { PlotRegionHighlighter = derive2 { name="PlotRegionHighlighter"; version="1.0"; sha256="0n1nkfr3sdaq6f5p9kgx4slrsvhpdbax3rinrkfkb1vnjj4swj77"; depends=[]; }; PoA = derive2 { name="PoA"; version="1.2.1"; sha256="0y8aqz1ainxdglxlfp9iqhvkmirpmc7dvwrcxz2l8lln86yrfqx6"; depends=[dplyr nloptr pracma tibble]; }; PoSI = derive2 { name="PoSI"; version="1.1"; sha256="1xwlj8dibaik37z6vj9q9vawavi7d49906wvxdd4drjzxzapq4ng"; depends=[]; }; - PogromcyDanych = derive2 { name="PogromcyDanych"; version="1.5"; sha256="1m6sycca44h8kdf9cd67annw6dxxwiscidzfnjrzqmqa4v6n7rsg"; depends=[dplyr SmarterPoland]; }; + PogromcyDanych = derive2 { name="PogromcyDanych"; version="1.7"; sha256="1fld65ksw47hvp0k1mjll0pxcpf0cjdqj5qhjx88mrbsr2f1y7x4"; depends=[dplyr SmarterPoland]; }; PoiClaClu = derive2 { name="PoiClaClu"; version="1.0.2.1"; sha256="1q89b0nypz2iivmgwg1nb1l7p285wy00s40j3qp8zc78ra1rjhyx"; depends=[]; }; PointFore = derive2 { name="PointFore"; version="0.2.0"; sha256="0ml6xcdl4ygr01q0cjwd11ql7wal91jnf3hs1rfhfr4mh8jpgivx"; depends=[boot car ggplot2 gmm lubridate MASS sandwich]; }; - PoisBinNonNor = derive2 { name="PoisBinNonNor"; version="1.3.2"; sha256="00j5k3kbh8rj9d0jgibi1zl77b257si8l3v2m2nrfyfwssfcrdlp"; depends=[BB corpcor Matrix mvtnorm]; }; - PoisBinOrd = derive2 { name="PoisBinOrd"; version="1.4.2"; sha256="0skgh9x675v921irgvwjc07b9fd0yzjwhj9z4vvzvkj4jk4gx22f"; depends=[corpcor GenOrd Matrix mvtnorm]; }; - PoisBinOrdNonNor = derive2 { name="PoisBinOrdNonNor"; version="1.5.2"; sha256="0a6ks20f9vnf8w8n0007yrqaa9vpgqq43vxa88dhvdpn6bbw5w0s"; depends=[BB corpcor GenOrd MASS Matrix]; }; - PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.6.2"; sha256="19ilr0fczr7candrmj372hhc6sai863qwcmnpimqgpfac7393qr5"; depends=[corpcor GenOrd Matrix mvtnorm psych]; }; - PoisNonNor = derive2 { name="PoisNonNor"; version="1.6.2"; sha256="1bf0qzgclw7993dc7x1sf3hfzgfv0jlga8ykvaif455d6nkiyy0k"; depends=[BB corpcor MASS Matrix]; }; - PoisNor = derive2 { name="PoisNor"; version="1.3.2"; sha256="1kpac3fz3cq4vi5maij0gbiwqm9qlvjwawvn2qz3sp5f2wn71w90"; depends=[corpcor Matrix mvtnorm]; }; - PoissonBinomial = derive2 { name="PoissonBinomial"; version="1.2.1"; sha256="10wcz6imlfzikgk5mj9hv3q1c6fcqfq0vri0aiapfl5cfl2mraj7"; depends=[BH Rcpp]; }; + PoisBinNonNor = derive2 { name="PoisBinNonNor"; version="1.3.3"; sha256="0m8ajizij9kvp057rqmd10zadmvr4a1ka664jc9rdjh2xqgd5s2i"; depends=[BB corpcor Matrix mvtnorm]; }; + PoisBinOrd = derive2 { name="PoisBinOrd"; version="1.4.3"; sha256="0s6v0minnwqx025nfn3kkkhbh8pzx6wgxars92kh6x9gdzf9i6ka"; depends=[corpcor GenOrd Matrix mvtnorm]; }; + PoisBinOrdNonNor = derive2 { name="PoisBinOrdNonNor"; version="1.5.3"; sha256="16c0z3974lvvr7xvrv8frzn9m5sg2jicjan52xgg7dxlm3rsij1s"; depends=[BB corpcor GenOrd MASS Matrix]; }; + PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.6.3"; sha256="02v9p82z85vkbhap2xn1rz8ibvvavsq8mgxxzicl749j4j9hcrmf"; depends=[corpcor GenOrd Matrix mvtnorm psych]; }; + PoisNonNor = derive2 { name="PoisNonNor"; version="1.6.3"; sha256="1572ma1vk17gp2j9fvmbiaxmnmb773mw15z6mlcf1slgpayp1ldb"; depends=[BB corpcor MASS Matrix]; }; + PoisNor = derive2 { name="PoisNor"; version="1.3.3"; sha256="1qi54fg2b1qc305kaihfwr2dkh3b3dd6l67yp9gi61n29kfxaqmf"; depends=[corpcor Matrix mvtnorm]; }; + PoissonBinomial = derive2 { name="PoissonBinomial"; version="1.2.3"; sha256="0lnsgjs5v1pha6vzdc2387mjscm8519dxhjl8q8lrdrjws3rh5jy"; depends=[Rcpp]; }; PoissonPCA = derive2 { name="PoissonPCA"; version="1.0.2"; sha256="0rb30l0x8knwvh8li62cfxms9b20db77g4r8cwgwasb9jjljxv3s"; depends=[]; }; PoissonSeq = derive2 { name="PoissonSeq"; version="1.1.2"; sha256="1hhx0gv06cp6hm6h36mqy411qn9x15y45crpzbyf8crfs85c6gbg"; depends=[combinat]; }; + PolicyPortfolios = derive2 { name="PolicyPortfolios"; version="0.2.2"; sha256="1mfhyy4qyadk389jj6q8livfj45qdwb57wx74cg85jiqd2g19d90"; depends=[dplyr ggplot2 ineq mgcv reshape2 vegan]; }; + PolyHaplotyper = derive2 { name="PolyHaplotyper"; version="1.0.0"; sha256="1mzbg3br7zhdnpgzdr679k94q4y5ig0y4gqja5li1g195w58b7vd"; depends=[XML]; }; PolyPatEx = derive2 { name="PolyPatEx"; version="0.9.2"; sha256="1z1hwvsw7b6cz5xfy35a5ldrzb3fhp3swiyz56v1zqblpsaz8n9g"; depends=[gtools]; }; PolyTrend = derive2 { name="PolyTrend"; version="1.2"; sha256="17n6phkzgaqrlzs8x1l5smnij1gxfklr0zj9pqfy5n8xqnpwssm5"; depends=[]; }; Polychrome = derive2 { name="Polychrome"; version="1.2.6"; sha256="0363cgrbbva56146hr0dh7bj7g86c8c1rqh82rbqk7cam3an8g9a"; depends=[colorspace scatterplot3d]; }; PolynomF = derive2 { name="PolynomF"; version="2.0-3"; sha256="067l71i2zjv6gvd0br2m034ls3r5lcmc0amml1qbj4wchd7mqlw9"; depends=[Rcpp]; }; Pomic = derive2 { name="Pomic"; version="1.0.4"; sha256="0xy5fgimbgqqac3n7akhwyvnrvd9fpvx9h8nk4spxrxc8x0km1w7"; depends=[]; }; + PoolTestR = derive2 { name="PoolTestR"; version="0.1.1"; sha256="1p6gg8npdw426irsai8y2bzblbpn4zjca3pyfzzgigy4hz89y1db"; depends=[BH brms dplyr lme4 progress Rcpp RcppEigen rstan rstantools StanHeaders stringr]; }; + PooledCohort = derive2 { name="PooledCohort"; version="0.0.1"; sha256="1zf8waqiw4282iyr30byd7czrdnf9rvp3mra6b7slqqs1z53lhr2"; depends=[glue]; }; PooledMeanGroup = derive2 { name="PooledMeanGroup"; version="1.0"; sha256="0i9s7qskjnji3mf6clsi69rnni57v8cysgr9gh3hvxjzlf1sq8y7"; depends=[]; }; PopED = derive2 { name="PopED"; version="0.5.0"; sha256="1yzldm4mvg4i9xhx1wrb7wbmp15fqsa68grnjj29ig11gbivyfab"; depends=[boot codetools dplyr ggplot2 gtools magrittr MASS mvtnorm purrr stringr tibble]; }; PopGenKit = derive2 { name="PopGenKit"; version="1.0"; sha256="0l4mbm0cyppgvcw2cbimrv29aiciyj00k8wfwcj5zr8sh7fgfhs4"; depends=[]; }; PopGenReport = derive2 { name="PopGenReport"; version="3.0.4"; sha256="0x9j9f9k65rfr4fxyrxqa9220psfh1bicls6vwbxmqsfdsfnvs0j"; depends=[ade4 adegenet calibrate data_table dismo gap gdistance genetics GGally ggplot2 knitr lattice mmod pegas plyr R_utils raster reshape rgdal RgoogleMaps sp vegan xtable]; }; PopGenome = derive2 { name="PopGenome"; version="2.7.5"; sha256="0xdwgih1n7bkykbzrnp293yzrlj80vr2v6rlsww61nxlhynbh9yn"; depends=[ff]; }; - PopVar = derive2 { name="PopVar"; version="1.2.1"; sha256="09az5wa0zai6axhvrljqdjn74nb7jikqwjqy8f570qxb6jbgfgay"; depends=[BGLR qtl rrBLUP]; }; + PopVar = derive2 { name="PopVar"; version="1.3.0"; sha256="1yc2qz7g5jv752yrhjq1ymfdjbqwdcp0hv7pm93qsn51k8fc8i9i"; depends=[BGLR qtl rrBLUP]; }; PortRisk = derive2 { name="PortRisk"; version="1.1.0"; sha256="05yxqcv0cijy3s9zx68f9xy59jv55kmj3v0pz5pgl17j23kb9rlc"; depends=[copula MASS MCMCpack tseries zoo]; }; PortalHacienda = derive2 { name="PortalHacienda"; version="0.1.6"; sha256="11fcd1m751xahv13s61n2lzxqxhzfkcxk3zv9kyjvrzb0fiy4jss"; depends=[curl dplyr forecast httr lubridate magrittr purrr tibble timetk xts zoo]; }; - PortfolioAnalysis = derive2 { name="PortfolioAnalysis"; version="1.1"; sha256="11nmfyzjkvczwnlr71wg57p0pkgvr3b8ywbvrws820x7yzd1k8l6"; depends=[dplyr ggplot2 lubridate PerformanceAnalytics plotly purrr quadprog quantmod readr rMorningStar rvest stringi stringr tidyr xml2 xts]; }; PortfolioAnalytics = derive2 { name="PortfolioAnalytics"; version="1.1.0"; sha256="1jy89brrdw8ilbi9pjxxq5yhqw85ik4kzdd2sa60crjlhvipx0ff"; depends=[foreach PerformanceAnalytics xts zoo]; }; PortfolioEffectEstim = derive2 { name="PortfolioEffectEstim"; version="1.4"; sha256="1sfgkwyn7vfy3rqb1cglywiv5xmyxhzvj38vgrvfq5jf3hvzsg21"; depends=[PortfolioEffectHFT rJava]; }; PortfolioEffectHFT = derive2 { name="PortfolioEffectHFT"; version="1.8"; sha256="0y4x0d91j6g52136d921hfs5swzf85gkxafxfkf3c15dl5ns120v"; depends=[ggplot2 rJava zoo]; }; PortfolioOptim = derive2 { name="PortfolioOptim"; version="1.1.1"; sha256="01fw1zr1gr6nlcgw8dlc66b3ygkl6w571lw73p13h0q17y1i872d"; depends=[Rsymphony]; }; - PostcodesioR = derive2 { name="PostcodesioR"; version="0.1.1"; sha256="1hwyc8i6a5rxlg3bvjcwayjmv858a050c3y4ig3ncaldifyky4lb"; depends=[httr]; }; + PostcodesioR = derive2 { name="PostcodesioR"; version="0.3.0"; sha256="1502dkkm0qnsdvw2ghi1qm2p9rlkw5n17pwz2s20ca9a6rnf4787"; depends=[httr]; }; PosteriorBootstrap = derive2 { name="PosteriorBootstrap"; version="0.1.0"; sha256="0zzhz88f53l1nqynl3wq4yww9z1v354a16hhin4sdd7ha1iqi9cj"; depends=[dplyr e1071 ggplot2 gridExtra MASS Rcpp rstan StanHeaders tibble]; }; PottsUtils = derive2 { name="PottsUtils"; version="0.3-3"; sha256="165k4sjh3kqkb8bzi68wx00yl77yfbgs70fcbpzmsmcw4g4hdpzn"; depends=[miscF]; }; PoweR = derive2 { name="PoweR"; version="1.0.7"; sha256="040wc7hxa8y6bm1rs7ip2skdxmmwksxkyb6xzqgdjp8m7a25fppb"; depends=[Rcpp RcppArmadillo]; }; - Power2Stage = derive2 { name="Power2Stage"; version="0.5.2"; sha256="1837pc94syhyl5i0kjdmlc1h7ckas3vcpwhvhgh46sv022lrg2gi"; depends=[cubature mvtnorm PowerTOST]; }; + Power2Stage = derive2 { name="Power2Stage"; version="0.5-3"; sha256="0fs6hkpfivc98dxnlmxqaxsr3bxvfqawjnwyw0qvans8m4wcq1kx"; depends=[cubature mvtnorm PowerTOST]; }; PowerNormal = derive2 { name="PowerNormal"; version="1.2.0"; sha256="1kryqcjvgwk0l4z3gqxdiz47mha3jw5583jlb9z7ml6v7cam06sm"; depends=[]; }; - PowerTOST = derive2 { name="PowerTOST"; version="1.5-2"; sha256="0afrznjqnfin8am8naj3d9n0kkw26cqy6yim8va2gc592nk62h7s"; depends=[cubature mvtnorm TeachingDemos]; }; + PowerTOST = derive2 { name="PowerTOST"; version="1.5-3"; sha256="0473vm267hsq7s8ggm4m01jig067qcpm30cza0j1kx9cw6ghq68d"; depends=[cubature mvtnorm TeachingDemos]; }; PowerUpR = derive2 { name="PowerUpR"; version="1.0.4"; sha256="0ng88x1zs4kb8cf2v51kynbp32iz41mh40my5sciyvjbw430bk59"; depends=[]; }; PracTools = derive2 { name="PracTools"; version="1.2.2"; sha256="08s8pm55814w6mjz3q4n1bcxccmjypb5qiws5g8pcafl6dj7z0wh"; depends=[]; }; PreKnitPostHTMLRender = derive2 { name="PreKnitPostHTMLRender"; version="0.1.0"; sha256="1749cd734f4bf0n4068s2m617k6as8h9bwp44mm3la2xy3vjf5g1"; depends=[knitr rmarkdown XML]; }; @@ -3397,27 +3508,29 @@ in with self; { PresenceAbsence = derive2 { name="PresenceAbsence"; version="1.1.9"; sha256="17qn4ggkr5aqml45nkihj1j35y479ywkm1xcfkb2g8ky66jb0c0s"; depends=[]; }; PressPurt = derive2 { name="PressPurt"; version="1.0.2"; sha256="05kca0rlhlvhgnw3r3p4sh42zwvhrhcjdwz65ykp14jxybfhc8in"; depends=[data_table ggplot2 gridExtra reticulate]; }; PrevMap = derive2 { name="PrevMap"; version="1.5.3"; sha256="0pgrfrfw587vsci98lxd205r8wl7x7c9ns15ypnhwr8xaysdxnpf"; depends=[lme4 Matrix maxLik numDeriv pdist raster splancs truncnorm]; }; + PriceIndices = derive2 { name="PriceIndices"; version="0.0.4"; sha256="10hdpv5y3hmlj484p3qn6mhirdl2gr4w3vjh97p971lfiaipjpb0"; depends=[caret dplyr ggplot2 lubridate reclin reshape strex stringr xgboost]; }; PriorCD = derive2 { name="PriorCD"; version="0.1.0"; sha256="1mb50w2i8sfxjzqd5xnfysn3jnzkkyv6l8algxnp0xpyhcq41pfs"; depends=[dplyr igraph ROCR visNetwork]; }; PriorGen = derive2 { name="PriorGen"; version="1.1.2"; sha256="0qvdqqdy7wdwwcq95mkgfyf7xf6xlpwdfs3gq299yyv2ba57flnm"; depends=[rootSolve]; }; PrivateLR = derive2 { name="PrivateLR"; version="1.2-22"; sha256="0d142fa3wk7yadvs8jszajs6hq9m03p0j6h5r4pbw7j0d1l72hgc"; depends=[]; }; + ProAE = derive2 { name="ProAE"; version="0.1.2"; sha256="1z31pln5v4xl4s3ksvywbdmrvz4d0gq6qpwhd98xgfc6a9p00fyf"; depends=[DescTools dplyr ExactCIdiff ggnewscale ggplot2 ggtext Hmisc magrittr]; }; ProDenICA = derive2 { name="ProDenICA"; version="1.0"; sha256="04gnsnd0xzw3bfbssdp06bar0lk305ry2c97pmwxgiz3ay88dfsj"; depends=[gam]; }; ProFit = derive2 { name="ProFit"; version="1.3.3"; sha256="0jrw0v7dg5mf4zxg7pqybh9qzsiqb3nnz8g5qlc4iz73mhr9gm2b"; depends=[celestial checkmate cubature FITSio LaplacesDemon magicaxis RColorBrewer]; }; ProFound = derive2 { name="ProFound"; version="1.14.1"; sha256="1p2mdy0z5p7as1x6vc572wjcl6f0acwgpvb39rmk2273kb1ldwz5"; depends=[celestial data_table FITSio foreach magicaxis RColorBrewer Rcpp]; }; ProPublicaR = derive2 { name="ProPublicaR"; version="1.1.1"; sha256="08bhqm64r79ywj394l1ywwcsjc79wzi85wlbp5xnr49bxzaysfp1"; depends=[config dplyr httr lubridate stringr]; }; + ProSGPV = derive2 { name="ProSGPV"; version="0.1.0"; sha256="017aqym6fp119zcz899nxsbg4q0qcahh6jjmn44ab8azlgr68dgc"; depends=[glmnet MASS]; }; ProTrackR = derive2 { name="ProTrackR"; version="0.3.7"; sha256="15m8g9v254avi68qr7v5q4fzhclkv1q849sj69fs0c9qcli1x384"; depends=[audio lattice signal tuneR XML]; }; ProbBayes = derive2 { name="ProbBayes"; version="1.1"; sha256="0bkbqyrmpy9swaxsl91w6iiw81znjf1lk4b0vqgn6wdnrir6gkmn"; depends=[ggplot2 gridExtra LearnBayes shiny]; }; - ProbForecastGOP = derive2 { name="ProbForecastGOP"; version="1.3.2"; sha256="0fnw3g19lx4vs8vmn4qdirvybkiy2cxkhwkn9qa3phz45iixnvx4"; depends=[fields RandomFields]; }; ProbMarg = derive2 { name="ProbMarg"; version="1.0.1"; sha256="02qc6c08vfg3inh14d3dzq28zgsgk9p7kb2ni9d14pcx5w9q6sji"; depends=[]; }; ProbReco = derive2 { name="ProbReco"; version="0.1.0.1"; sha256="0ck5jvbgmf2j4qr4rsamjdrds5jzcggwcvs2hqzhh23ildk7hj7h"; depends=[BH mvtnorm purrr Rcpp RcppEigen Rdpack StanHeaders]; }; + ProbSamplingI = derive2 { name="ProbSamplingI"; version="0.1.0"; sha256="1s72jvzayrscn5k43gwip28lax4k24b6piy1wmwvkmpf2xx57wiv"; depends=[]; }; ProbYX = derive2 { name="ProbYX"; version="1.1-0"; sha256="0dphf6jr72l235v3yjhwi8bqmv6ac7yrbyfwhx4qjrrcdnsb7qhl"; depends=[rootSolve]; }; ProbeDeveloper = derive2 { name="ProbeDeveloper"; version="1.0.0"; sha256="1d2zr8ikia3mspp2arpx7iwf4a4pq1ywl82pxbxrw6xpz313d5x9"; depends=[Biostrings TmCalculator]; }; - ProcData = derive2 { name="ProcData"; version="0.2.5"; sha256="17nm9sxv9k5mqjqabla6ldz1781446z566vz8cqs6cg1i6ngkrw8"; depends=[keras Rcpp]; }; - ProcMod = derive2 { name="ProcMod"; version="1.0.7"; sha256="0ka02pwnmgvm55cqh8lqjnamz42dqfwi3c0xglrz6zrmgag119f8"; depends=[foreach MASS Matrix permute Rdpack]; }; + ProcData = derive2 { name="ProcData"; version="0.3.2"; sha256="1a0rbj57rbxf5axfyd1j9j1mh7ara3rlq31lysaprwaymig94mml"; depends=[keras Rcpp]; }; ProfessR = derive2 { name="ProfessR"; version="2.4-1"; sha256="1wsbx0dsygc1ipzhgs1pd0lhdb0qvp4ydqzwarn6zv27rzf4p3bd"; depends=[RPMG]; }; ProfileLikelihood = derive2 { name="ProfileLikelihood"; version="1.1"; sha256="16cdp1nimhg1sd2x0qbffm7clgk54p0838y688z8lnsrjaggmb0x"; depends=[MASS nlme]; }; ProfoundData = derive2 { name="ProfoundData"; version="0.2.1"; sha256="1zqg821pv3i5nf76s7yppnmy13y14pj0l7rjhk50wlxrxdb53ibz"; depends=[DBI RNetCDF RSQLite settings sqldf zoo]; }; - ProjectManagement = derive2 { name="ProjectManagement"; version="1.3.3"; sha256="186vq7kd2rzqml88q6iskwb9h1xbl0azkn4dv2msd04klw6fir7j"; depends=[GameTheory igraph kappalab lpSolveAPI plotly triangle]; }; - ProjectTemplate = derive2 { name="ProjectTemplate"; version="0.9.3"; sha256="09flfskpp0v7h9n7x9b15i4q242mzbcz6jkd2dqvrfa7sm4hpp8f"; depends=[]; }; + ProjectManagement = derive2 { name="ProjectManagement"; version="1.3.7"; sha256="1x83pzfhv137kqnxm2rxy19wh81q683nwv36iqaw3pq3zla6kc50"; depends=[GameTheory igraph kappalab lpSolveAPI plotly triangle]; }; + ProjectTemplate = derive2 { name="ProjectTemplate"; version="0.10.1"; sha256="0m8s1addb7nq743mbr4mpfp3r3rnryaxba65dhyk0afmk2y828za"; depends=[]; }; ProjectionBasedClustering = derive2 { name="ProjectionBasedClustering"; version="1.1.6"; sha256="0b2bljw5gslkw6jkajnk3jsx1kgi7bk9vrnivgkaxq76qi8bgsr9"; depends=[deldir GeneralizedUmatrix geometry ggplot2 plotly Rcpp shiny shinyjs shinythemes vegan]; }; ProliferativeIndex = derive2 { name="ProliferativeIndex"; version="1.0.1"; sha256="03ipsbs8pfwr8wsx7j2y9c67ic4qcady7xpa47l8dr14ff63cfk7"; depends=[]; }; PropCIs = derive2 { name="PropCIs"; version="0.3-0"; sha256="1ywzi88igzaj2wnbrqa08cy7pw886z2m0x3j7rk45rin9mgpfdfd"; depends=[]; }; @@ -3428,23 +3541,23 @@ in with self; { Pstat = derive2 { name="Pstat"; version="1.2"; sha256="17bqkaf9590jhiaamaafmvkqmy2aqkcfqhk8m4w35g58j48yk4yx"; depends=[]; }; PsumtSim = derive2 { name="PsumtSim"; version="0.4"; sha256="0079kb1bgsxs4cwmn33rbbk2jgq39rdjfgz9k9hc64iyzz0i6na3"; depends=[boot EffectsRelBaseline]; }; PsyControl = derive2 { name="PsyControl"; version="1.0.0.0"; sha256="1c5ml6s3c8kzf7p0mig84bmq40b0491ah713bm6jpy2s3nwnmafs"; depends=[irtoys ltm]; }; - PtProcess = derive2 { name="PtProcess"; version="3.3-13"; sha256="0vk1n7hk6v592fi5ld70db6m92zgpjx97axs5h8p53c29984qhwz"; depends=[]; }; + PtProcess = derive2 { name="PtProcess"; version="3.3-16"; sha256="1d5i847jy9i1llbfsdkqcjmiids3kjxnqscinrwqyv7mwb9ijk2z"; depends=[]; }; PubBias = derive2 { name="PubBias"; version="1.0"; sha256="0dr5dhfx57knrs05pbx9ngg4k2937n8gjzsgd0jfqd8dfxhy051k"; depends=[R_utils rmeta]; }; PubMedMining = derive2 { name="PubMedMining"; version="1.0.0"; sha256="03lhml5jk69racmhlh6xa8j2rv8xb87vg6hr1caiqpd4kqg16n1q"; depends=[easyPubMed stringr]; }; PubMedWordcloud = derive2 { name="PubMedWordcloud"; version="0.3.6"; sha256="1wfp1fpr4an7psrwidx38brvhvghmvfsgjy4gdx81p1bdsdn2kw2"; depends=[RColorBrewer RCurl stringr tm wordcloud XML]; }; PublicationBias = derive2 { name="PublicationBias"; version="2.2.0"; sha256="1mdvzf2qiq4zvp4iinjnnj0rq3dqcz18r27nr62znh05jp6i96gx"; depends=[dplyr ggplot2 metafor MetaUtility Rdpack robumeta]; }; - Publish = derive2 { name="Publish"; version="2020.11.30"; sha256="0szyyb9b7g928qbiafakb6q8mnsld1bk8kya2vaiw3m30k2jgv3n"; depends=[data_table lava multcomp prodlim survival]; }; + Publish = derive2 { name="Publish"; version="2020.12.23"; sha256="1qpv5hj9agmc4hrpskqk0lns8bh8w3j27d4ckh5y7gh1532qzad7"; depends=[data_table lava multcomp prodlim survival]; }; PupilPre = derive2 { name="PupilPre"; version="0.6.2"; sha256="123m1zqld0jl26vqz41iic7vxzyfs1aw8zi5ki2cy6wzw9ss87m6"; depends=[dplyr ggplot2 mgcv rlang robustbase shiny signal tidyr VWPre zoo]; }; PupillometryR = derive2 { name="PupillometryR"; version="0.0.3"; sha256="19llm6p67z0z29zxmjfz9ad624428szdjdd1ssj7j3zjcyjvqihy"; depends=[data_table dplyr fda ggplot2 itsadug lazyeval mgcv rlang signal tidyr zoo]; }; PurBayes = derive2 { name="PurBayes"; version="1.3"; sha256="0nbm4cyrwfbwwbjbjkylr86cshaqbvbif6dkp4fag8kbcgyyx5qh"; depends=[rjags]; }; - Pursuit = derive2 { name="Pursuit"; version="1.0.1"; sha256="0c4bc0ldfx02a8ws3g3gn7smikg3fdjygybs3q764kxhq88kv42l"; depends=[MASS]; }; - PxWebApiData = derive2 { name="PxWebApiData"; version="0.4.0"; sha256="0n126fnfyfyvndvhalf8wiybnh00hlg25afxvni66s06r5v2pq8l"; depends=[httr jsonlite pxweb rjstat]; }; - PythonInR = derive2 { name="PythonInR"; version="0.1-12"; sha256="0f6jijbqdn6p2530l4v0b0ys1gcgji1d1i63bcd8g1ml21grvyfg"; depends=[pack R6]; }; + Pursuit = derive2 { name="Pursuit"; version="1.0.2"; sha256="1dd5idsqx08yyn92mwszad7rgl4hf2vr2a0m0cjqpa00cym43z7l"; depends=[MASS]; }; + PwrGSD = derive2 { name="PwrGSD"; version="2.3.3"; sha256="18qb1an6i5p08dvimwc0n95b4m1myh3k64iinsx0121jzprzcxxp"; depends=[survival]; }; + PxWebApiData = derive2 { name="PxWebApiData"; version="0.5.0"; sha256="14g83ms4frgzspffc2vj8833ksnwb64r2qpnmy5f9jzzwp3gf61k"; depends=[httr jsonlite pxweb rjstat]; }; Q2q = derive2 { name="Q2q"; version="0.1.0"; sha256="1n97axhcq64fg92cbndqw70c8awknjap91bh2h6i5cvd0c80pb85"; depends=[]; }; Q7 = derive2 { name="Q7"; version="0.1.0"; sha256="09jhqraajvlm7iiri4f7xlllkcx8q5h3sg472ishj47wg5qf2rym"; depends=[magrittr]; }; QAIG = derive2 { name="QAIG"; version="0.1.7"; sha256="04ygizvplvrzhf1p0vwj75x7k8sl0ym5zbrsvn63y983awih2p6i"; depends=[Formula stringr]; }; QBAsyDist = derive2 { name="QBAsyDist"; version="0.1.2"; sha256="1yql29npaq9yz02bv3hqf5m2mhscjms7qqf4vlaxm8s665rxcxad"; depends=[ald Deriv GoFKernel locpol nloptr quantreg scdensity zipfR]; }; - QCA = derive2 { name="QCA"; version="3.10"; sha256="1ws5k7zv0knsr7jn8xz7wvg2xbp1pbcqll6rpyvfvn4ll007y1wh"; depends=[admisc shiny venn]; }; + QCA = derive2 { name="QCA"; version="3.11"; sha256="0j6cj61y1kv5cn08zch0rrh2mlcnqzbc5q6n7cqx39w2zgs8v89q"; depends=[admisc shiny venn]; }; QCAfalsePositive = derive2 { name="QCAfalsePositive"; version="1.1.1"; sha256="03qzb6vdnbri52gfx3laz14988p2swdv9m8i5z7gpsv3f3bjrxbp"; depends=[]; }; QCApro = derive2 { name="QCApro"; version="1.1-2"; sha256="1glfb1x1h05cs07nq5glqvlil58wp3c0kaxi1l7k94y797i8r7hq"; depends=[lpSolve]; }; QCAtools = derive2 { name="QCAtools"; version="0.2.3"; sha256="1q49l2mf02hqvz2ahqjdx7i3yxniy7dn2s74xjl9l6zdq8bypfw2"; depends=[directlabels ggplot2 QCA stringr]; }; @@ -3453,17 +3566,19 @@ in with self; { QCSIS = derive2 { name="QCSIS"; version="0.1"; sha256="0ibh3060jxf426svdfxiryvfhr8pwk991xs653d50ip4f9290y3a"; depends=[]; }; QCSimulator = derive2 { name="QCSimulator"; version="0.0.1"; sha256="1ff7xagnzibhrwrmkqyky4ik3kx7rrlajrs1ypm210sl1d73jwvs"; depends=[ggplot2]; }; QDComparison = derive2 { name="QDComparison"; version="3.0"; sha256="0y4494r3ixkyh58xr9md7c6xgcj1hgbjzfybvqqdbawjxvy5p38i"; depends=[]; }; - QF = derive2 { name="QF"; version="0.0.3"; sha256="1gd90dyx5h7l1phm1hy7sg78b7l9dxydl63y1jmgaac704zrld1y"; depends=[Rcpp RcppGSL]; }; + QDiabetes = derive2 { name="QDiabetes"; version="1.0-2"; sha256="0r1rbg3azh7y4f5r9w0zj6qa658f63gyq6b007q514iivkzxib1c"; depends=[]; }; + QF = derive2 { name="QF"; version="0.0.4"; sha256="1f5506l3jjq657lfh3r1dn9cfxsdsbph11i1f6wnqpfdcjhk7dj1"; depends=[Rcpp RcppGSL]; }; QFASA = derive2 { name="QFASA"; version="1.0.3"; sha256="1yw745wk9ijvqs3hv0gbm6bkzjrlj42ipwbzypj73s3f7ygl452f"; depends=[boot futile_logger gamlss gamlss_dist Rsolnp]; }; QFRM = derive2 { name="QFRM"; version="1.0.1"; sha256="1k79sq9il4326q7ivwdwlzw7drjv4pwqra3fr8kyyqcpmxh9296h"; depends=[]; }; QGameTheory = derive2 { name="QGameTheory"; version="0.1.2"; sha256="0h3qkb0zg6km3s89bjnv9503hgcng4wfywfy1x5dsbj5azs9hs5w"; depends=[dplyr R_utils RColorBrewer]; }; QGglmm = derive2 { name="QGglmm"; version="0.7.4"; sha256="0ghvicz4ia1180byj28lmg49889hqhb94g1jrkhm6hnzgqbjnfmd"; depends=[cubature]; }; QHOT = derive2 { name="QHOT"; version="0.1.0"; sha256="02z0n2jawd6m7bvyvpcy0j13p1c0zm036g62n56xva18qnq5c9lb"; depends=[]; }; QLearning = derive2 { name="QLearning"; version="0.1.1"; sha256="1bx77yxsnzh0ny3ghala5fw54lxzrxqk9s32qk3dzvfbyp4paggn"; depends=[]; }; + QPmin = derive2 { name="QPmin"; version="0.5-1"; sha256="1hfvbi2qfynnkg2pmr7qsw75bmijwglnxchbzxcbikm5yw3sd2mz"; depends=[Matrix]; }; QQperm = derive2 { name="QQperm"; version="1.0.1"; sha256="06xhv54zgnx8i22j23a0dqxhh7my416idpkkwq93qd1rdzgamzc8"; depends=[]; }; QRAGadget = derive2 { name="QRAGadget"; version="0.1.0"; sha256="0vmhbpfbbpbcs6s9zjam893yl54spbx4x4698c504g96hcc19kkp"; depends=[htmlwidgets leaflet magrittr miniUI raster scales shiny sp]; }; QRISK3 = derive2 { name="QRISK3"; version="0.3.0"; sha256="0aqqncmlhb5iks8081y34ydlls3g31j994fqqzsbsc3ckcks87qj"; depends=[]; }; - QRIpkg = derive2 { name="QRIpkg"; version="0.2.1"; sha256="09pqkqi0jydnin1xvzk9vardp0748mf21p84336swl9wjqfnagwb"; depends=[ggplot2 quantreg]; }; + QRIpkg = derive2 { name="QRIpkg"; version="0.2.2"; sha256="0xqc72p3jm61kifha77c8sfk7b1p7cfdskzkm29w4j06009qd8a8"; depends=[ggplot2 quantreg]; }; QRM = derive2 { name="QRM"; version="0.4-31"; sha256="15dyk3zfy92vj4xny04dh5mqcyb8qh61566m313qs17mxwibvn2a"; depends=[gsl Matrix mgcv mvtnorm numDeriv Rcpp timeDate timeSeries]; }; QRank = derive2 { name="QRank"; version="1.0"; sha256="1f924r5bf5vjfl12hk1n5m3f94g30f6vmvzq2bn8295dflyndck0"; depends=[quantreg]; }; QRegVCM = derive2 { name="QRegVCM"; version="1.2"; sha256="0fcydkf6r2qxd59ylr8vn76bkxks91v58gfzvq3rjd5mqf9vsaaq"; depends=[quantreg SparseM truncSP]; }; @@ -3475,9 +3590,10 @@ in with self; { QUALYPSO = derive2 { name="QUALYPSO"; version="1.2"; sha256="0hp99hhlv7rijn34ncshpvbnmhbx3f5km7bzr0z7yr7l3j1vx3sc"; depends=[doParallel expm foreach MASS Rfast]; }; QZ = derive2 { name="QZ"; version="0.2-1"; sha256="1xivasa5dppm9z02ki6ciqxj0ybxch41w1xszl9zqrf755b6f6xw"; depends=[Matrix]; }; Qapprox = derive2 { name="Qapprox"; version="0.1.0"; sha256="0mcrpmbpmj2hzv15a5rfc4l1vl3iccbsiw3a04zb4ql5mwr9ksyr"; depends=[]; }; - Qtools = derive2 { name="Qtools"; version="1.5.3"; sha256="02vaz2zmn1vmqmij7zsqxapsydwfabksn0v3ih6bwkxpnnh8kqnf"; depends=[boot glmx Gmisc gtools MASS Matrix np numDeriv quantreg Rcpp RcppArmadillo]; }; + Qtools = derive2 { name="Qtools"; version="1.5.4"; sha256="0fqxh62r2zhvnjqld5rjn8yv6cb86brjbf08alq0pr6rc0is6sza"; depends=[boot glmx gtools MASS Matrix np numDeriv quantreg Rcpp RcppArmadillo]; }; QuACN = derive2 { name="QuACN"; version="1.8.0"; sha256="1597blp8gqc5djvbgpfzi8wamvy0x50wh5amxj9cy99qa0jlglxi"; depends=[combinat graph igraph RBGL]; }; QuClu = derive2 { name="QuClu"; version="0.1.0"; sha256="0a2malh9vz5jcjgdx4d98k0c61vz3ip8ynqh5i85x8hzcby11qgj"; depends=[]; }; + QuadRoot = derive2 { name="QuadRoot"; version="0.1.0"; sha256="1zb2vhxnx93aan2a4jgny9qn1cgjj2a4zjz3h4whqvam5mdlh890"; depends=[]; }; QualInt = derive2 { name="QualInt"; version="1.0.0"; sha256="1ms96m3nz54848gm9kdcydnk5kn2i8p1rgl2dwn7cqcqblfvsr4j"; depends=[ggplot2 survival]; }; Quandl = derive2 { name="Quandl"; version="2.10.0"; sha256="0kw3hh19q32vc1rr3y65ry3kyxc9dwyb94xpfv9srkpzg48damhr"; depends=[httr jsonlite xts zoo]; }; QuantNorm = derive2 { name="QuantNorm"; version="1.0.5"; sha256="1hds9ybwsgnmcpa22vlmgdq02ilhn0c6a7z1qjiq4i5iqjd4gwf6"; depends=[]; }; @@ -3490,8 +3606,8 @@ in with self; { Quartet = derive2 { name="Quartet"; version="1.2.2"; sha256="0yb4i55zvgn3al01qvr78v9psvn7b1x1fz69mmy3i010lqbyyjnq"; depends=[ape Rcpp Rdpack Ternary TreeTools viridisLite]; }; QuasiSeq = derive2 { name="QuasiSeq"; version="1.0-10-2"; sha256="1mr43vys9l1n859lzlcakjrvjllybgrwl0p8mc28h7m87yjkj670"; depends=[edgeR mgcv pracma]; }; R_SamBada = derive2 { name="R.SamBada"; version="0.1.2"; sha256="123a7s3rcmraq4chiqjkdp969jmr4c5br2xamdgvj6gzaf8zpmg0"; depends=[gdsfmt SNPRelate]; }; - R_cache = derive2 { name="R.cache"; version="0.14.0"; sha256="1n8n5ihkryrbxv630dwhz4r048nyv676qd3i9f5z5fa04hvlxbqq"; depends=[digest R_methodsS3 R_oo R_utils]; }; - R_devices = derive2 { name="R.devices"; version="2.16.1"; sha256="15zlnq3g27whq26fbcy5zfl5hiddm256h4rga4frblg6wqlbkvdd"; depends=[base64enc R_methodsS3 R_oo R_utils]; }; + R_cache = derive2 { name="R.cache"; version="0.15.0"; sha256="09pipn1974ivjh4sm3n5fjlh31rilf87p30qwq7y25vriyqd7d5d"; depends=[digest R_methodsS3 R_oo R_utils]; }; + R_devices = derive2 { name="R.devices"; version="2.17.0"; sha256="1djz6vm1b7sjvx1q319dl47gbnz9kvipaxcz9i0spyp094lv3m62"; depends=[base64enc R_methodsS3 R_oo R_utils]; }; R_filesets = derive2 { name="R.filesets"; version="2.14.0"; sha256="08xv8b3c81nf54viyr3w912al18483k5gfnjpg7bxbdfk70dfzbh"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; }; R_huge = derive2 { name="R.huge"; version="0.9.0"; sha256="13p558qalv60pgr24nsm6mi92ryj65rsbqa6pgdwy0snjqx12bgi"; depends=[R_methodsS3 R_oo R_utils]; }; R_matlab = derive2 { name="R.matlab"; version="3.6.2"; sha256="1fw6ny8xb2j088k3s9lzd15av3j6xc2bvbccyrp7yjx2f3s3i8qv"; depends=[R_methodsS3 R_oo R_utils]; }; @@ -3504,14 +3620,14 @@ in with self; { R1magic = derive2 { name="R1magic"; version="0.3.2"; sha256="1xfldr5y7pfdi6qljjvckknsv2wi9rnzwmqxkpgnyc96md2fvwjr"; depends=[]; }; R2019nCoV = derive2 { name="R2019nCoV"; version="0.1.0"; sha256="1959mwacn0zzq0g5ili2v6aqs51rb6qvlsv16xx7qwml8xahf215"; depends=[dplyr ggplot2 jsonlite maps pinyin]; }; R2Addhaz = derive2 { name="R2Addhaz"; version="0.1.0"; sha256="1xaqbzq2chsgkg1gc163fq8qcgzq9wwn2bm4mwvc31ay0gg4f3xi"; depends=[ahaz caTools pracma Rdpack survival zoo]; }; - R2BEAT = derive2 { name="R2BEAT"; version="1.0.1"; sha256="0x0gb3gpvjmwa6f2p0p45m86l9iy7nwmcjhyi68lg694cvd9ny37"; depends=[]; }; + R2BEAT = derive2 { name="R2BEAT"; version="1.0.2-1"; sha256="168q8xbl4kxr5mxfg8f02wg7w0kwp6sc70pwycqaz88zgi0pxwxq"; depends=[devtools plyr sampling]; }; R2BayesX = derive2 { name="R2BayesX"; version="1.1-1"; sha256="1ff8cscl839ykp7l34sscc8zqp516mh64igk7dfv9n02l40w8ypf"; depends=[BayesXsrc colorspace mgcv]; }; R2DGC = derive2 { name="R2DGC"; version="1.0.3"; sha256="0f84fmpf3m2s2p6bllvjs8rgnhwjy54adblv02dq8gakwvb4j2aw"; depends=[]; }; R2DT = derive2 { name="R2DT"; version="0.2"; sha256="0hyisq6mij80v14sjspn9idd1h38sd1knbpd0dn2wy9k2w1fl0pk"; depends=[data_table devFunc plyr]; }; R2HTML = derive2 { name="R2HTML"; version="2.3.2"; sha256="00kxny7hajs9r2kw63qk7d03ggdxx2j1g8vbrmzp806y8aczvik9"; depends=[]; }; R2MLwiN = derive2 { name="R2MLwiN"; version="0.8-7"; sha256="1r12b0gy5747acn0jyf3n2f210a51pgl6vkk1rd4fbbj0dk5bwmf"; depends=[broom coda digest doParallel foreach foreign lattice Matrix memisc R2WinBUGS texreg tibble]; }; R2OpenBUGS = derive2 { name="R2OpenBUGS"; version="3.2-3.2.1"; sha256="0689aqa034xkbyy46m3sjanjkxrii4ma1crm5qw5kaqbx7dg153c"; depends=[boot coda]; }; - R2SWF = derive2 { name="R2SWF"; version="0.9-4"; sha256="1yz4l4wn6a00bjwsnzfbg5lfxd4n8fqzqmbqgl2xj458azwl74z0"; depends=[sysfonts]; }; + R2SWF = derive2 { name="R2SWF"; version="0.9-5"; sha256="1xahkqp93b94zwg0d6r659kafa9dz5ksms8ycka1dnmihzzr50z4"; depends=[sysfonts]; }; R2WinBUGS = derive2 { name="R2WinBUGS"; version="2.1-21"; sha256="0k8k214x712vjj2k1am4zzf6scccs3b98ysiz4lwxpzm818wp1ps"; depends=[boot coda]; }; R2admb = derive2 { name="R2admb"; version="0.7.16.2"; sha256="1gwp850ff76lqqn6amj75rjqb1szk6x2vlhqgwng4z45i56bmdf7"; depends=[coda lattice]; }; R2jags = derive2 { name="R2jags"; version="0.6-1"; sha256="0h5si5d8yn6zxbfmv38kmyqhpwm1valnnn3sb445465m8rafl5y6"; depends=[abind coda R2WinBUGS rjags]; }; @@ -3522,12 +3638,15 @@ in with self; { R6 = derive2 { name="R6"; version="2.5.0"; sha256="00ifi2kwa7kn67xf0z1w6jfdicjczygbyi5mhfw2qlzc4sbazhdf"; depends=[]; }; R62S3 = derive2 { name="R62S3"; version="1.4.1"; sha256="0g01izg77spn79xqwva2gzrvk66i20xlb789wl5rgcz7pz7gpjd2"; depends=[data_table]; }; R6DS = derive2 { name="R6DS"; version="1.2.0"; sha256="0ai1yqfhn634vm88waxdb6j24vwcna29gdqzdrwm0nxwf7l6g0m3"; depends=[R6]; }; + R6P = derive2 { name="R6P"; version="0.2.0"; sha256="1q7qx79z5g1dhyb1dawmzps9w19mn6nlr9fmf7z83kqy9mdnhkrn"; depends=[purrr R6 stringr]; }; RAC = derive2 { name="RAC"; version="1.5"; sha256="0q0kk9j3blrnhv0rfmryc35lli5j4kds2vmjdpg77znagb45609k"; depends=[maps maptools matrixStats ncdf4 plotrix raster rgdal rgeos rstudioapi sp]; }; RAD = derive2 { name="RAD"; version="0.3"; sha256="0nmgsaykxavq2bskq5x0jvsxzsf4w2gqc0z80a59376li4vs9lpj"; depends=[MASS mvtnorm]; }; RADanalysis = derive2 { name="RADanalysis"; version="0.5.5"; sha256="1py07p24i1pky8wwyy8ajmkg6h2n7nbpxp1w6lrkiyl0p2kgjm20"; depends=[scales sfsmisc]; }; - RAINBOWR = derive2 { name="RAINBOWR"; version="0.1.21"; sha256="076x39rm20j4v7s1c1j0dck7kbwnzm6ddaxd46h9j112f0r5ka76"; depends=[ape cluster expm ggimage ggplot2 ggtree haplotypes MASS Matrix optimx pbapply pbmcapply pegas phylobase Rcpp RcppEigen rgl rrBLUP scatterpie stringr]; }; - RALSA = derive2 { name="RALSA"; version="0.90.1"; sha256="1yssxzyii7jhki8c4mmi8l5z8p81p0hds7lq8y77kd0xflq9mxa6"; depends=[data_table DT foreign gdata Hmisc openxlsx readr shiny shinydashboard shinyFiles shinyjs stringi stringr]; }; + RAEN = derive2 { name="RAEN"; version="0.2"; sha256="098d990qa987hx2llqwdw2bmi5nmrlda23j1rgmw5nirllk28d30"; depends=[boot doParallel fastcmprsk foreach glmnet lars]; }; + RAINBOWR = derive2 { name="RAINBOWR"; version="0.1.26"; sha256="1x2gdx9fk28r7q6i5b8x0kald2qfiljqm62fpwhg57vz0q53pl51"; depends=[ape cluster expm ggplot2 ggtree haplotypes here htmlwidgets MASS Matrix optimx pbmcapply pegas phylobase Rcpp RcppEigen Rfast rrBLUP scatterpie stringr]; }; + RALSA = derive2 { name="RALSA"; version="1.0.0"; sha256="0dal95kzi91f78j196w09d22c198cginihhbmpxbzqqws9sdv6c4"; depends=[data_table DT foreign gdata Hmisc openxlsx readr shiny shinydashboard shinyFiles shinyjs stringi stringr]; }; RAM = derive2 { name="RAM"; version="1.2.1.7"; sha256="0aalswivpjs1glwf4yh3b79lch3n32fyj5xda55h3v7gzs7p0d7f"; depends=[ade4 ape data_table FD ggmap ggplot2 gplots gridExtra labdsv lattice MASS permute phangorn phytools plyr RColorBrewer reshape reshape2 RgoogleMaps scales vegan VennDiagram]; }; + RAMClustR = derive2 { name="RAMClustR"; version="1.2.0"; sha256="1cvwl8jhwqkd1mcs0dvznrycs39pwpapsf733slch8sgm2kbg231"; depends=[BiocManager dynamicTreeCut e1071 fastcluster ff ggplot2 gplots httr InterpretMSSpectrum jsonlite MSnbase pcaMethods preprocessCore RCurl stringi stringr webchem xml2]; }; RAMP = derive2 { name="RAMP"; version="2.0.2"; sha256="0836fiycrsxiwdw7srz1rvsf639iqh2rk89gavx4kvn0i0sc8d2x"; depends=[]; }; RAMpath = derive2 { name="RAMpath"; version="0.4"; sha256="0blixfmgiq22hd356hrp4vbhfkkgh0a58143nhirjx3sav9pxc1v"; depends=[ellipse lavaan MASS]; }; RANKS = derive2 { name="RANKS"; version="1.0"; sha256="1lvaya9jlqrr9klqznw4fz5h5x0sw191ci74hpymb4gzhhxcbp27"; depends=[graph limma NetPreProc PerfMeas RBGL]; }; @@ -3535,14 +3654,15 @@ in with self; { RAP = derive2 { name="RAP"; version="1.1"; sha256="18dclijs72p6gxawpg8hk7n512ah4by5jfg2jnrp8mz79ajmdgir"; depends=[]; }; RAPIDR = derive2 { name="RAPIDR"; version="0.1.1"; sha256="14cnw4jjs5anb55zlg1yj6qc9yr51rsamigq2q7h8ypj2ggnna1d"; depends=[Biostrings data_table GenomicAlignments GenomicRanges PropCIs Rsamtools]; }; RAPTOR = derive2 { name="RAPTOR"; version="1.0.1"; sha256="1bj3xsl83mb8zwap8icywrfdld382fram79b0n14jbk1l87rj9r4"; depends=[mgcv]; }; + RAQSAPI = derive2 { name="RAQSAPI"; version="2.0.1"; sha256="0dz81fkxjk85n9c9kabibyr0c7bg6widamnnvld135q3w1nridfc"; depends=[dplyr glue gtools httr jsonlite lifecycle lubridate magrittr purrr rlang stringr tibble]; }; RATest = derive2 { name="RATest"; version="0.1.8"; sha256="13z2dlyq3cxgqphzjfx4wabbkk4kf33ybmnhcs6f034kya2z7yj3"; depends=[ggplot2 gridExtra quantreg]; }; RAdwords = derive2 { name="RAdwords"; version="0.1.18"; sha256="1c3m2j2cf1s51p783rdng5ns913bv7rbjc1vpmrmsxg2kf5f6qyq"; depends=[RCurl rjson]; }; RAhrefs = derive2 { name="RAhrefs"; version="0.1.4"; sha256="0yd7jbv2x711dnhbvwjjg7qhg8h8bh5564amsv9bkqw661i042m3"; depends=[assertthat httr jsonlite testthat]; }; RApiDatetime = derive2 { name="RApiDatetime"; version="0.0.4"; sha256="0z08xwdn3vzwmprx5yh2xip5bqk13zrd47lwnsa2yin2phz6yry1"; depends=[]; }; RApiSerialize = derive2 { name="RApiSerialize"; version="0.1.0"; sha256="0gm2j8kh40imhncwwx1sx9kmraaxcxycvgwls53lcyy2ap344k9j"; depends=[]; }; RAppArmor = derive2 { name="RAppArmor"; version="3.2.2"; sha256="0l0f4k666nh00db94sjxz60anr4l9vm0259pcc2a4whk2pmjcq5n"; depends=[unix]; }; - RAthena = derive2 { name="RAthena"; version="1.11.1"; sha256="0fb7hnlxkjcwxmjcyiwxhj697zqbcyn96lpvf7x8cviivgx8xldk"; depends=[data_table DBI reticulate uuid]; }; - RBF = derive2 { name="RBF"; version="2.0.1"; sha256="1jkjyhb9mdqh59cnyn5x83624cy1wg328x83l422qyh20nckvszp"; depends=[]; }; + RAthena = derive2 { name="RAthena"; version="2.0.1"; sha256="1gcziyih4a72r6dnjapj6kpb0d111bqwx32f92l85pm8z931mppg"; depends=[data_table DBI reticulate uuid]; }; + RBF = derive2 { name="RBF"; version="2.1.0"; sha256="0062ckvrjfkkl5lfrshrr2cynrxsrp4zpdpl8nij06hm00i3gfs5"; depends=[]; }; RBMRB = derive2 { name="RBMRB"; version="2.1.4"; sha256="1n5kskcsw0ks3f97mnlbkgvwdnxv3s6xy02b8cj5wq3hdpf66h94"; depends=[data_table ggplot2 httr plotly rjson]; }; RBNZ = derive2 { name="RBNZ"; version="1.1.0"; sha256="11fdnc2pmw5nq3lswid078l307ln6853a3b9d383msvrkz6yms26"; depends=[httr lubridate readxl rvest xml2]; }; RBPcurve = derive2 { name="RBPcurve"; version="1.2"; sha256="0zkfvnhm780vid4qqdrx9mnc6jxxrmrnq47pqvk35rm3m4l96782"; depends=[BBmisc checkmate mlr shape TeachingDemos]; }; @@ -3556,26 +3676,31 @@ in with self; { RCBR = derive2 { name="RCBR"; version="0.5.9"; sha256="1nxaf485jfg1kr80bxwczf27xz5ab7yz61c5l3bg9192jdf432ql"; depends=[Formula Matrix mvtnorm orthopolynom REBayes Rmosek]; }; RCEIM = derive2 { name="RCEIM"; version="0.3"; sha256="1kil5r88b6lf8vxmswz0wn0hhjxjm8jmlcl5kxjwl6fwjyy2z120"; depends=[]; }; RCGLS = derive2 { name="RCGLS"; version="1.0.3"; sha256="12mmfs91fmhdxdxr7q16hnjlg7bz2bbkf8chld4cyf8clnflzvsj"; depends=[ncdf4 raster RCurl sp]; }; + RCMinification = derive2 { name="RCMinification"; version="1.0"; sha256="1n8rb5lz0bansggma8gs45xbmmzh98xcsg1vcwwviv2zgq8ww7jf"; depends=[]; }; RCPmod = derive2 { name="RCPmod"; version="2.190"; sha256="1r24g8fcizyqzgp0da90sxpwalgcsgz2b168j2smpylxraiqb037"; depends=[fishMod glmnet gtools MASS]; }; RCRnorm = derive2 { name="RCRnorm"; version="0.0.2"; sha256="1mz1jb7mc9c47hbk9flnddny4zir6r2k5qis30iynwqny521l6ln"; depends=[truncnorm]; }; RCSF = derive2 { name="RCSF"; version="1.0.2"; sha256="1hjl7qsdgcddn3nh2likndhfhnw9gj3453xqq96gddgb1y0m3bh1"; depends=[Rcpp]; }; + RCSL = derive2 { name="RCSL"; version="0.99.95"; sha256="1ngzbhrc74ljhidsf7a17k4hyx0igv2srgbf822gm2wawzsmp0y2"; depends=[ggplot2 igraph mclust NbClust pracma RcppAnnoy Rtsne SingleCellExperiment umap]; }; + RCT = derive2 { name="RCT"; version="1.1"; sha256="0nbjw6iyhxdszpb0i4zg6mk1z3a0lsij2300gygyqj0q4x6fmsl0"; depends=[broom dplyr forcats ggplot2 glue lfe magrittr MASS pracma purrr rlang stringr tidyr tidyselect]; }; RCarb = derive2 { name="RCarb"; version="0.1.4"; sha256="0mlas45ypwdkk6gr35fhsrjgn8am06ikh123drmky1yj1kkg6p76"; depends=[interp matrixStats]; }; RCassandra = derive2 { name="RCassandra"; version="0.1-3"; sha256="0xa241s81cyw6lfjb522f2mlyrd0gav9yz3z5jab9hpdpgg9ri38"; depends=[]; }; + RChest = derive2 { name="RChest"; version="1.0.3"; sha256="112y6g1lyk3wky825g77sy49wgqs8vqdi90lrp0qza6cqjg381mq"; depends=[Rdpack reticulate]; }; RChronoModel = derive2 { name="RChronoModel"; version="0.4"; sha256="0haqxwic160pnnm90bgchzxmsdwmi6m97i9xrh8js8bp2xn76l5f"; depends=[hdrcde]; }; RCircos = derive2 { name="RCircos"; version="1.2.1"; sha256="1zdq3ga2pd0p2gzlm0vr8w3a4rq4hgka3r56kkcym0za0nmqk51v"; depends=[]; }; RClickhouse = derive2 { name="RClickhouse"; version="0.5.2"; sha256="1ii4d1nh15km1savahpwgvdn3lb2y7sa44izqydckw1xawwgf7xr"; depends=[bit64 DBI dbplyr dplyr Rcpp]; }; + RClimacell = derive2 { name="RClimacell"; version="0.1.4"; sha256="03w2psiix74d2cbaz06bk77pclc6lfjhfdi057rdmw4nv3xv1fqi"; depends=[assertthat dplyr httr lubridate magrittr rlang stringr tibble tidyr tidyselect]; }; RClone = derive2 { name="RClone"; version="1.0.2"; sha256="1kv02acj0mk5102wvmdnxnkb7qig3jb9amcs4k2r26fpa4hyfa7f"; depends=[]; }; RColetum = derive2 { name="RColetum"; version="0.2.1"; sha256="1hgk9p234m3w49sw2j2rg8c14z3gz1mabvb69b1bxrg7f1mz9slg"; depends=[dplyr httr jsonlite]; }; RColorBrewer = derive2 { name="RColorBrewer"; version="1.1-2"; sha256="1pfcl8z1pnsssfaaz9dvdckyfnnc6rcq56dhislbf571hhg7isgk"; depends=[]; }; RConics = derive2 { name="RConics"; version="1.0"; sha256="1lwr7hi1102gm8fi9k5ra24s0rjmnkccihhqn3byckqx6y8kq7ds"; depends=[]; }; RCriteo = derive2 { name="RCriteo"; version="1.0.2"; sha256="1vyhnblw9zr5h6c25lf76p9vn95k8vr0hpq1sjkccdwl9yvsyhfy"; depends=[httr plyr RCurl XML]; }; - RCurl = derive2 { name="RCurl"; version="1.98-1.2"; sha256="1a57jm41550ah3v7cqdv5gdabhp375qgcndr901lns65qg6s0x2x"; depends=[bitops]; }; - RCytoGPS = derive2 { name="RCytoGPS"; version="1.0.1"; sha256="0n0vc9r8wd0ccxgadkggjvzim5fjg4hjscs1n037ndgmks02pf3m"; depends=[rjson]; }; - RCzechia = derive2 { name="RCzechia"; version="1.6.1"; sha256="043zsswggi5ckdldjacjgbw2bhyz4jhy9m731rb1rk458jy1k5d3"; depends=[curl httr jsonlite magrittr sf]; }; - RDFTensor = derive2 { name="RDFTensor"; version="1.2"; sha256="0ijqb78wwjgz2x52z4zr1mn0lmcj8c0gx04j67cld8zfcqkn0mpg"; depends=[doParallel foreach Matrix pracma]; }; + RCurl = derive2 { name="RCurl"; version="1.98-1.3"; sha256="0m975zzl76xcj3xz181w9fvh4sr4hwm9dcgg13b3cqfm5g8mx6jw"; depends=[bitops]; }; + RCytoGPS = derive2 { name="RCytoGPS"; version="1.1.1"; sha256="01pgg4i3qw75h9i49agv0xv23b5dn6ngcc4ma22dldydiiwhrhh5"; depends=[rjson]; }; + RCzechia = derive2 { name="RCzechia"; version="1.7.0"; sha256="068kjzcvbpda589lzgx8rws6gzahgpzlaisj32qprxbnv9ikc4xm"; depends=[curl httr jsonlite magrittr sf]; }; + RDFTensor = derive2 { name="RDFTensor"; version="1.3"; sha256="1kfhhn0lb1r61bkgxn7rv1smgk8b7vxbc8y97hdmg5argiywc65i"; depends=[doParallel foreach Matrix pracma]; }; RDIDQ = derive2 { name="RDIDQ"; version="1.0"; sha256="09gincmxv20srh4h82ld1ifwncaibic9b30i56zhy0w35353pxm2"; depends=[]; }; RDML = derive2 { name="RDML"; version="1.0"; sha256="13ly1p42njbcygwvkyii8sjqbsywjy5w5g1kd7m8kswi5dsk3qqv"; depends=[checkmate data_table lubridate pipeR R6 readxl rlist stringr xml2]; }; - RDS = derive2 { name="RDS"; version="0.9-2"; sha256="01axx9l71j2v57ss9qfhih8jpmy5ayhyjxxvyp4dwxpr5rynfxna"; depends=[anytime ergm ggplot2 gridExtra Hmisc igraph isotone network reshape2 scales statnet_common]; }; + RDS = derive2 { name="RDS"; version="0.9-3"; sha256="0kcq5ym6l80shzxf9zv2rwb84r0q9qr2cwimcg76r97sfx7c2kp2"; depends=[anytime ergm ggplot2 gridExtra Hmisc igraph isotone network reshape2 scales statnet_common]; }; RDSTK = derive2 { name="RDSTK"; version="1.1"; sha256="07vfhsyah8vpvgfxfnmp5py1pxf4vvfzy8jk7zp1x2gl6dz2g7hq"; depends=[plyr RCurl rjson]; }; RDStreeboot = derive2 { name="RDStreeboot"; version="1.0"; sha256="10ry8rna450j389cplvyvgwljxa8lli7licwdin64b1kyzy2cdn7"; depends=[]; }; RDataCanvas = derive2 { name="RDataCanvas"; version="0.1"; sha256="1aw19lmdphxwva5cs3f4fb8hllirzfkk48nqdgrarz32l11y5z5j"; depends=[jsonlite]; }; @@ -3584,8 +3709,9 @@ in with self; { RDota2 = derive2 { name="RDota2"; version="0.1.6"; sha256="0fjsgg4dmzw2xwrf8jxq0f2d7f78bf67bl3ms5qcjk9kskfnymag"; depends=[httr jsonlite]; }; REBayes = derive2 { name="REBayes"; version="2.2"; sha256="1jh5vw9pbcf5gpmx3b5b36fh8rz5y8npx53aai0kxh49kjf8d63c"; depends=[Matrix reliaR]; }; RECA = derive2 { name="RECA"; version="1.7"; sha256="1xikj20flqajpkw4wyynmqd1pafbylzwfrmc8bz9pqgggjjhrqql"; depends=[]; }; - REDCapExporter = derive2 { name="REDCapExporter"; version="0.2.1"; sha256="14hnqjp53w4dl0fwlkr9x9qqm022280r0069akiz4c9axlmyds9r"; depends=[curl data_table keyring lubridate]; }; + REDCapExporter = derive2 { name="REDCapExporter"; version="0.2.2"; sha256="0w7c1y58vnkbd11ndkcn5s5c54pmvyqhflwgg2q6dc3n671yp9wx"; depends=[curl data_table keyring lubridate]; }; REDCapR = derive2 { name="REDCapR"; version="0.11.0"; sha256="0frhmnm25w9b84qk7vvvr8wkv1w3dmm0vqxav2cs7jimq38zwcvz"; depends=[checkmate dplyr httr magrittr readr rlang tibble tidyr]; }; + REEMtree = derive2 { name="REEMtree"; version="0.90.4"; sha256="11m9k6xli3gqw2f9vwa9abpwsnxawi675zmi916yq2shws49m8xn"; depends=[nlme rpart]; }; REGENT = derive2 { name="REGENT"; version="1.0.6"; sha256="1f2sjqkhw3rbmwbcmx7l7imj696kblisi8y3fz77xygbcbxa6rmq"; depends=[]; }; REPLesentR = derive2 { name="REPLesentR"; version="0.4.1"; sha256="0rwd7hxk12f4f1kpj6sl424yhbxi3h9dz6km5awijazmgv95carz"; depends=[dat knitr modules]; }; REPPlab = derive2 { name="REPPlab"; version="0.9.4"; sha256="1pf8zrjdzziyq2lw31p1ij7cn4j7pf659ygxv8wpfnmcmpaqbc45"; depends=[lattice LDRTools rJava]; }; @@ -3598,10 +3724,10 @@ in with self; { REdaS = derive2 { name="REdaS"; version="0.9.3"; sha256="09mmcvzgsxvrcq7sq3pw81pxgb1493p8lx8p5hhz8i42vshza6pn"; depends=[]; }; REddyProc = derive2 { name="REddyProc"; version="1.2.2"; sha256="0b1vyv92wxbvdh1jaqmfb4qb1clpbh50j8h55nq777zc1l9ml4a7"; depends=[dplyr magrittr mlegp purrr Rcpp rlang solartime tibble]; }; REddyProcNCDF = derive2 { name="REddyProcNCDF"; version="1.1.4"; sha256="099f4mzqj7pjlrs8rdjg44mjm0058x3pj2imrfvk892hmlk4r53p"; depends=[REddyProc]; }; - REndo = derive2 { name="REndo"; version="2.4.1"; sha256="0knyyc2l2lsr0wrswhvsqsac1k257j46hii84xdl4nhwqch9qzxi"; depends=[AER corpcor data_table Formula lme4 lmtest Matrix mvtnorm optimx Rcpp RcppEigen]; }; - RFCCA = derive2 { name="RFCCA"; version="1.0.2"; sha256="17zqk95zlm00vhj55yz828kqpkx9bhwg1m6f4s7ij9bcmx72l2gq"; depends=[CCA PMA]; }; + REndo = derive2 { name="REndo"; version="2.4.2"; sha256="1c6wa4by8ns2msjn4718bnjch37ii5ij36my6yfl4ylylm0l2n77"; depends=[AER corpcor data_table Formula lme4 lmtest Matrix mvtnorm optimx Rcpp RcppEigen]; }; + RFCCA = derive2 { name="RFCCA"; version="1.0.4"; sha256="1a38q90pra9p2l1i0jhd981jnv8lanzwkkfhav0370ddri50r505"; depends=[CCA PMA]; }; RFGLS = derive2 { name="RFGLS"; version="1.1"; sha256="13ggxj74h5b2hfhjyc50ndxznkvlg18j80m78hkzwh25d3948fsk"; depends=[bdsmatrix Matrix]; }; - RFLPtools = derive2 { name="RFLPtools"; version="1.6"; sha256="1hl2crg7jl266zac41xvx151h7kl52346wnlvd8hba64s4s4apay"; depends=[RColorBrewer]; }; + RFLPtools = derive2 { name="RFLPtools"; version="1.9"; sha256="0vcxlvfhm6sksjs7zx45jss31310fvglzaj948j49xhf08rik0iz"; depends=[RColorBrewer]; }; RFOC = derive2 { name="RFOC"; version="3.4-6"; sha256="0cs5wmpvrlag9aisbfiwkvwcb3skv5z4sawl30krmsq49mzj7yhd"; depends=[GEOmap MASS RPMG RSEIS splancs]; }; RFinanceYJ = derive2 { name="RFinanceYJ"; version="0.3.1"; sha256="0qhmzsch7c2p0zckjkspsajzh8m10cf75ixjlgd0nj8rm41fngm3"; depends=[XML xts]; }; RFishBC = derive2 { name="RFishBC"; version="0.2.3"; sha256="1xhjsinb6dfr1zzzyvawc6bb10dnr3nbx86mi6lrzav42sbq31ni"; depends=[cli clisymbols crayon readbitmap rlang settings stringr tidyr withr]; }; @@ -3614,7 +3740,8 @@ in with self; { RGCCA = derive2 { name="RGCCA"; version="2.1.2"; sha256="0zcxakqnmih0243y5b6r9nmcfanzxd6q344pd5bca5pnm3y43wr0"; depends=[Deriv MASS]; }; RGCxGC = derive2 { name="RGCxGC"; version="1.1-2"; sha256="03ihqra8q50a98adgxrx8l7js963f41kg2fy3lxzh9zma4gzj62q"; depends=[colorRamps mixOmics ptw Rdpack RNetCDF]; }; RGENERATE = derive2 { name="RGENERATE"; version="1.3.5"; sha256="12dq04xpl06zhkzwqx3zy0bkpvb5phbdj2inxsyczf6d4dk209mb"; depends=[RMAWGEN]; }; - RGF = derive2 { name="RGF"; version="1.0.6"; sha256="11pnbiyp39r95c8ajj2jyxz4h1zf6fi8ki78rmn4vp7xm2bl3zff"; depends=[Matrix R6 reticulate]; }; + RGENERATEPREC = derive2 { name="RGENERATEPREC"; version="1.2.8"; sha256="1y70fs8d7vldwijgzny3awcvx97sghclyrb40dzvffli2q15ym9f"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN stringr]; }; + RGF = derive2 { name="RGF"; version="1.0.7"; sha256="0610r0nyhdiqywqyi4f18vk3lg9hjgxgfa9vpph6v4w3px9v6jba"; depends=[Matrix R6 reticulate]; }; RGIFT = derive2 { name="RGIFT"; version="0.1-5"; sha256="1745fs4bq0ss39fiwljspvrmnkgbbpc1fjvhvcrsmp2iizq12sgn"; depends=[]; }; RGISTools = derive2 { name="RGISTools"; version="1.0.2"; sha256="0pildj5pmc34f58bv39gxl3p2g0cr32przdhjnss37kcdlcv5zlb"; depends=[curl fields httr mapview raster Rdpack rjson rvest sf sp stars tmap urltools XML xml2]; }; RGeckoboard = derive2 { name="RGeckoboard"; version="0.1-5"; sha256="0h7x3kdmlba9siwcnf313ajmz2jsmyhl7pndzs7qaqina3hkl46r"; depends=[httr jsonlite]; }; @@ -3635,12 +3762,12 @@ in with self; { RHT = derive2 { name="RHT"; version="1.0"; sha256="1gxf8nhj3y92h8al7l3fxa45wc568kb3cykrbdjlsy2zjacf7fcc"; depends=[]; }; RHawkes = derive2 { name="RHawkes"; version="0.0"; sha256="0qi32f6im6fsgvjs8bravc5z21557zn2d0a7i88dy0rri7czm5p7"; depends=[IHSEP]; }; RI2by2 = derive2 { name="RI2by2"; version="1.3"; sha256="0smc0fb9anq5ih9zx2slfbqyx02njm0hc7g22gpfggskmxf2l509"; depends=[gtools Rcpp]; }; - RIA = derive2 { name="RIA"; version="1.4.2"; sha256="0i7z16viwgdsdnlkxq44p5l492asxv7ghn8005hlvpyxqihazkqw"; depends=[nat oro_dicom oro_nifti]; }; + RIA = derive2 { name="RIA"; version="1.5.0"; sha256="1zf6b8yjyhwr98k8xrdrv3g415kiqgb5s2gnpvy6shjxjhwf9qb6"; depends=[nat oro_dicom oro_nifti]; }; RIFS = derive2 { name="RIFS"; version="0.1-5"; sha256="0705dhirh7bhy2yf3b1mpk3m7lggg4pwy640lvaspwaxkd6zac5w"; depends=[]; }; RISCA = derive2 { name="RISCA"; version="0.9"; sha256="0fq474xv8dcj548wm3dydz70cgvmgrz3h8q1mlzyrxbbwrvzx8wm"; depends=[caret date doParallel foreach glmnet kernlab MASS mvtnorm nlme nnet relsurv statmod SuperLearner survival]; }; RISmed = derive2 { name="RISmed"; version="2.2"; sha256="0nwixhngi4r2f73362salivsmsf7l52bm13jqvhdq8mfiigm80vd"; depends=[]; }; RIdeogram = derive2 { name="RIdeogram"; version="0.2.2"; sha256="0wvzlnisnxwzdzfh8ph4yspr8abi5qk6p4z2qa14ykzn8yry61ni"; depends=[ggplot2 grImport2 rsvg scales tidyr]; }; - RImageJROI = derive2 { name="RImageJROI"; version="0.1.1"; sha256="0a4sa60klbpl31qxxvjjbksdhvs3vwm9na1v7014v93fzxy6bjas"; depends=[spatstat]; }; + RImageJROI = derive2 { name="RImageJROI"; version="0.1.2"; sha256="1rsc8iv80zyjzpj80yyyhndxvskdbldsfc2gskrr1r8yh5gmhn23"; depends=[spatstat spatstat_geom]; }; RImagePalette = derive2 { name="RImagePalette"; version="0.1.1"; sha256="054w8xzsn330qg7piq6ajhji9na2swkkdis2567cy3q099npfl5v"; depends=[ggplot2]; }; RImpact = derive2 { name="RImpact"; version="1.0"; sha256="010bdq6r2fv4rs78kl1ixnw1di39v90ckh8bblzi0wv4adlbaza4"; depends=[]; }; RInSp = derive2 { name="RInSp"; version="1.2.4"; sha256="1rfikmrz1y7sx9qwsqh5ifqryf6218n9dbhfmk2w2vl2pdgw4xyr"; depends=[]; }; @@ -3652,7 +3779,7 @@ in with self; { RJSONIO = derive2 { name="RJSONIO"; version="1.3-1.4"; sha256="141ijm9570mg1180isvi0jb9vd3b08s5gb9dl1wa5v0m3s9jq52l"; depends=[]; }; RJSplot = derive2 { name="RJSplot"; version="2.5"; sha256="0p2zqbq29pfjl703wqqjzgmif7yfzz7l8rzarjf5axkdy7w7fcyl"; depends=[]; }; RJafroc = derive2 { name="RJafroc"; version="2.0.1"; sha256="1vrjnqn1lv10945ba29zjlbkh3zyw28ppv4093v24lirw8vzmjp4"; depends=[bbmle binom dplyr ggplot2 mvtnorm numDeriv openxlsx Rcpp readxl stringr]; }; - RJcluster = derive2 { name="RJcluster"; version="0.1.0"; sha256="0pjabvh006gplds5h2wq5k7cwzp8rksamzvy3daahhbadvar4jr8"; depends=[doParallel foreach infotheo matrixStats mclust profvis Rcpp RcppArmadillo rlang]; }; + RJcluster = derive2 { name="RJcluster"; version="2.5.0"; sha256="0xngs3kn3r9d7n5m7fjclhxhk7ky80j23g8gd3kbalas1hkmlfgp"; depends=[foreach infotheo matrixStats mclust profvis Rcpp RcppArmadillo rlang]; }; RKEA = derive2 { name="RKEA"; version="0.0-6"; sha256="1dncplg83b4zznh1zh90wr8jv5259cy93imrry86c5kqdijmhrrp"; depends=[rJava RKEAjars tm]; }; RKEAjars = derive2 { name="RKEAjars"; version="5.0-4"; sha256="1j4643xc8k3zy4rv0h8dd154jafihnjr43wzz3d93j11g2w9xhq3"; depends=[rJava]; }; RKEEL = derive2 { name="RKEEL"; version="1.3.2"; sha256="120x49zblhs7grqj919m3ll9q5ddr3kkqicy1am5b8hahybiz5al"; depends=[arules doParallel foreach gdata Matrix pmml R6 rJava RKEELdata RKEELjars XML]; }; @@ -3661,35 +3788,35 @@ in with self; { RKHSMetaMod = derive2 { name="RKHSMetaMod"; version="1.1"; sha256="1h8gqqfmlrzyj4n997yn13vqpaw2kwzl45gscy3fdhskzmyg0ss3"; depends=[Rcpp RcppEigen RcppGSL]; }; RKUM = derive2 { name="RKUM"; version="0.1.1"; sha256="1w0v6l61dm7xixnyywsc7xziixz7k9r1ja26zcy77nry5kn6v60q"; depends=[]; }; RKelly = derive2 { name="RKelly"; version="1.0"; sha256="0mkpc95j67rg2gcj2fc4w8kv4v31cpiyvh660y8kc2fjr5q4aj3l"; depends=[]; }; - RKorAPClient = derive2 { name="RKorAPClient"; version="0.5.9"; sha256="17jpc54hj76n4dlzqdbbi99xylnvc9fb72gmz6in2vfw9lrix913"; depends=[broom dplyr ggplot2 highcharter htmlwidgets httr jsonlite keyring lubridate magrittr plotly PTXQC R_cache tibble tidyr]; }; + RKorAPClient = derive2 { name="RKorAPClient"; version="0.6.1"; sha256="00cp8v4xhl6442ci3yr9y21s0k2zzxqcdblijrg99mza2w039gqw"; depends=[broom dplyr ggplot2 highcharter httr jsonlite keyring lubridate magrittr PTXQC R_cache tibble tidyr]; }; RLRsim = derive2 { name="RLRsim"; version="3.1-6"; sha256="1wkkibr250frsbfq70m9jdrylxb492zibf5w03z6zis98pjffssp"; depends=[lme4 mgcv nlme Rcpp]; }; RLT = derive2 { name="RLT"; version="3.2.2"; sha256="1a8cip975z99g8ljng4y86wv1gf1xwg0sqnxz79wj6zxpw8fk37c"; depends=[]; }; RLeafAngle = derive2 { name="RLeafAngle"; version="1.0"; sha256="1anks22hn6qpac556p99kilkhc80h572dvcyz3wj1nqffdrhgrh3"; depends=[]; }; RLogicalOps = derive2 { name="RLogicalOps"; version="0.1"; sha256="1qyn80x3x3bb5wgzyzw6pxs8a6q26yq1fkmkz7f5wywsnrj8hzfj"; depends=[rstackdeque stringr]; }; RLumCarlo = derive2 { name="RLumCarlo"; version="0.1.7"; sha256="1r70d68y3l43pb47wxhhbgbirnnx0hyaklvphlqrhnlkxp04r4xk"; depends=[abind doParallel foreach khroma magrittr Rcpp RcppArmadillo scatterplot3d]; }; - RLumModel = derive2 { name="RLumModel"; version="0.2.7"; sha256="03ydiccwj5a3m2wxhz40za546bw83s2lmcz7akdwx6ms6azdd9kk"; depends=[deSolve Luminescence Rcpp RcppArmadillo]; }; + RLumModel = derive2 { name="RLumModel"; version="0.2.8"; sha256="129qp5y7qmqwx820fknzwdylkhc9fn17divn0572afcaj5lv9786"; depends=[deSolve Luminescence Rcpp RcppArmadillo]; }; RLumShiny = derive2 { name="RLumShiny"; version="0.2.2"; sha256="0rwl555564ccw4pdzya88s3h3q30iq5dmi77141ji8ir91x4rz3g"; depends=[data_table DT googleVis knitr Luminescence RCarb readxl rhandsontable rmarkdown shiny shinydashboard shinyjs]; }; RM_weights = derive2 { name="RM.weights"; version="2.0"; sha256="1by1z7gwwx0jjhhvsjkr7f6m7n0x43bj080ah5275cja7xqr5nm6"; depends=[Hmisc psychotools]; }; RM2 = derive2 { name="RM2"; version="0.0"; sha256="1v57nhwg8jrpv4zi22fhrphw0p0haynq13pg9k992sb0c72dx70a"; depends=[msm]; }; RM2006 = derive2 { name="RM2006"; version="0.1.1"; sha256="1bx2y58c8fkpv0d1sn5abxbajks3sbz2v00idnvbp7rw1i05i5q4"; depends=[]; }; + RMAT = derive2 { name="RMAT"; version="0.2.0"; sha256="15bn9smlw9czryh6dvkpqxcp25sqd1vfq2cbs8wpg7nq58xyc6y4"; depends=[dplyr magrittr purrr]; }; RMAWGEN = derive2 { name="RMAWGEN"; version="1.3.7"; sha256="10hgssy59fcjbv333grpf6f3m7924hav66xxqhdlsdnwix19q7sb"; depends=[chron date vars]; }; - RMKL = derive2 { name="RMKL"; version="1.0"; sha256="118xdnzljskyf4ibdrlhy07r1y1x5r2b0mqagqaabxs7s9503whc"; depends=[caret e1071 kernlab Rcpp RcppArmadillo]; }; RMKdiscrete = derive2 { name="RMKdiscrete"; version="0.1"; sha256="0b4adw46sn98qmy4nxv5l5svcjrp5532x7slfhhgsskqx408lzjf"; depends=[]; }; RMLPCA = derive2 { name="RMLPCA"; version="0.0.1"; sha256="1xzh6fwl71dzdpbqgpkqnmdzdk8rblg6n1ddic5yxxfvzg3bh13x"; depends=[Matrix pracma RSpectra]; }; RMOA = derive2 { name="RMOA"; version="1.0.1"; sha256="1ppbwqdfxzk1ayms0rqw22l0r8vkk8av39spwpq8avgl6vssw8c4"; depends=[rJava RMOAjars]; }; RMOAjars = derive2 { name="RMOAjars"; version="1.0.1"; sha256="0qzpwsbndn8fw9560z9h9w9ff9bx6xj7mr50683q1n3dpn5z637i"; depends=[rJava]; }; RMPSH = derive2 { name="RMPSH"; version="1.1.1"; sha256="0jffp8942ydwain23kvy7q6avpxxsb77jj1mg4bq43fwgfc9nqjy"; depends=[Rcpp]; }; - RMSNumpress = derive2 { name="RMSNumpress"; version="1.0"; sha256="0vc35ciaz03agq2cmlmy54dc0yq0c9d6zm0p04nd5pyaq5rlf318"; depends=[Rcpp]; }; + RMSNumpress = derive2 { name="RMSNumpress"; version="1.0.1"; sha256="1y86dpa8kpq2bkvl90qwghxrnll5h3y9ycyvmamm4kd7ivy59sxi"; depends=[Rcpp]; }; RMTL = derive2 { name="RMTL"; version="0.9"; sha256="08da67wvzmibziqhnlzh43sydaihk4rsq2k5hs6ih3jkkidrhlgv"; depends=[corpcor doParallel foreach MASS psych]; }; RMThreshold = derive2 { name="RMThreshold"; version="1.1"; sha256="0wkc42vcggib002ad6ch43h6avpdgl12szrrrfd2p0wl72cwn5n1"; depends=[Matrix png]; }; RMTstat = derive2 { name="RMTstat"; version="0.3"; sha256="1nn25q4kmh9kj975sxkrpa97vh5irqrlqhwsfinbck6h6ia4rsw1"; depends=[]; }; - RMaCzek = derive2 { name="RMaCzek"; version="1.3.4"; sha256="1pg19jx74zdslbffw04agr9fn72sm4ad38rlwgncm84l75m107mr"; depends=[GA seriation]; }; + RMaCzek = derive2 { name="RMaCzek"; version="1.3.5"; sha256="19hb25rl4fmyyaklj0jlvdh41zg9k2d6hkmm4ixvh8y9dbp675c8"; depends=[GA seriation]; }; RMallow = derive2 { name="RMallow"; version="1.1"; sha256="1s6a3347739rfc8rrh2773b278gcbp8hf5j5psm61fz7bavy9gcj"; depends=[combinat]; }; - RMariaDB = derive2 { name="RMariaDB"; version="1.0.11"; sha256="0rv41khf13b8vzrb5fl6sgrn1dyfn1d2mvn6ypn68r82q6b3984g"; depends=[BH bit64 DBI hms plogr Rcpp]; }; + RMariaDB = derive2 { name="RMariaDB"; version="1.1.1"; sha256="03i2fiix9dvask03q1629njb9457x9dh03r1iwvlkwn7crn6mjxn"; depends=[bit64 DBI hms lubridate plogr Rcpp]; }; RMark = derive2 { name="RMark"; version="2.2.7"; sha256="0qxa383cagzqrnfc3izybb4lrg8z1r3nw1j5b7h4wkjwy0k3kczb"; depends=[coda matrixcalc msm]; }; RMediation = derive2 { name="RMediation"; version="1.1.4"; sha256="19idqx0hwljbcfrpqwa81k7cxbd8kv77ji8yi4n4p7517jbkzma6"; depends=[e1071 lavaan MASS]; }; RMixpanel = derive2 { name="RMixpanel"; version="0.7-1"; sha256="1xwmmfvky49n1l0w3kwcyaf2h4rhzz4k5icjwvpc90fqk8sxib6a"; depends=[base64enc jsonlite RCurl uuid]; }; - RMixtComp = derive2 { name="RMixtComp"; version="4.1.2"; sha256="1a7digfxx0wx1p0fvyvhznffzd13lzf64c2y6gvrgj7wv2z8hg5k"; depends=[ggplot2 plotly RMixtCompIO RMixtCompUtilities scales]; }; + RMixtComp = derive2 { name="RMixtComp"; version="4.1.3"; sha256="0v1qhqvl0s2b93xhykjr99h5gbz48l9npp0vyazh0ncx8gnxrzfl"; depends=[ggplot2 plotly RMixtCompIO RMixtCompUtilities scales]; }; RMixtCompIO = derive2 { name="RMixtCompIO"; version="4.0.6"; sha256="1r0za8s31mk9d3vgvsj930qpy5xnzdfgz06fjg5qzzc2l6jp96k3"; depends=[BH doParallel foreach Rcpp RcppEigen]; }; RMixtCompUtilities = derive2 { name="RMixtCompUtilities"; version="4.1.4"; sha256="1rhdmiap7xm96igclas67dz8naywjkddydbk9m3hp0d0zhgblc5i"; depends=[ggplot2 plotly scales]; }; RMySQL = derive2 { name="RMySQL"; version="0.10.21"; sha256="0cbb5ln9iigl816nzvsls9zil5qlfr8yv2aginapqv6n69nz0srs"; depends=[DBI]; }; @@ -3708,16 +3835,16 @@ in with self; { RNentropy = derive2 { name="RNentropy"; version="1.2.2"; sha256="0chvmrvpyyghilwb63y6pd1zp94i5qhpv5w19x9nw0ypk86pp2dj"; depends=[]; }; RNetCDF = derive2 { name="RNetCDF"; version="2.4-2"; sha256="14jgqp3ynf1ndkzbwx7xmxd9gimjigm4012mrn9p076xd2y4qxci"; depends=[]; }; RNetLogo = derive2 { name="RNetLogo"; version="1.0-4"; sha256="1z7jp454k197c0zbkn64zmf25wadkiznv3w2csgiz917cbx6xcn1"; depends=[igraph rJava]; }; - RNewsflow = derive2 { name="RNewsflow"; version="1.2.5"; sha256="0q7w0p727b1srdrx4mhbl31hfl4fxcavs5asg2knim4ihw034qqd"; depends=[data_table igraph Matrix quanteda Rcpp RcppEigen RcppProgress scales stringi tm wordcloud]; }; + RNewsflow = derive2 { name="RNewsflow"; version="1.2.6"; sha256="06hz5fim5ad8kbpc4crs9vdn7k9q5phhzscd46s4xk0b3n0i8wi1"; depends=[data_table igraph Matrix quanteda Rcpp RcppEigen RcppProgress scales stringi tm wordcloud]; }; RNifti = derive2 { name="RNifti"; version="1.3.0"; sha256="1zr0q79id62csmc30c7gs4hbmavk8n6p50a981sfz51dczhjj5ny"; depends=[Rcpp]; }; RNiftyReg = derive2 { name="RNiftyReg"; version="2.7.0"; sha256="0y7s2zcjjnb9jakdhyd6hmdj9axdpvbnhijs2finnlwc0d09jpz1"; depends=[ore Rcpp RcppEigen RNifti]; }; ROAuth = derive2 { name="ROAuth"; version="0.9.6"; sha256="0vhsp8qybrl94898m2znqs7hmlnlbsh8sm0q093dwdb2lzrqww4m"; depends=[digest RCurl]; }; ROCR = derive2 { name="ROCR"; version="1.0-11"; sha256="0amvvrkiflmr3qygrsgrsja4gaf2v6r6h6i2bgpsm8r069vmlf2p"; depends=[gplots]; }; ROCS = derive2 { name="ROCS"; version="1.3"; sha256="11vdf8701ap6ya7c7kx9jhvg7qfc6vkij3jridna6f4xj384grki"; depends=[poibin rgl]; }; ROCit = derive2 { name="ROCit"; version="2.1.1"; sha256="0sd6ckh7k8aqwhzzp3qff6g7d03klbr0mbp403pib3823c8pqa55"; depends=[]; }; - ROCnReg = derive2 { name="ROCnReg"; version="1.0-4"; sha256="0kgr3pz39wqd0ngp2xh2avqvcbjg5vnffnpjw0fsfvwjxhrc2i6a"; depends=[lattice MASS Matrix moments nor1mix np pbivnorm spatstat]; }; + ROCket = derive2 { name="ROCket"; version="1.0.1"; sha256="1p5b1408fdq8z64b7ihwcdxprg5rfiq4z5annxzvmizzr6qwn8qa"; depends=[data_table]; }; + ROCnReg = derive2 { name="ROCnReg"; version="1.0-5"; sha256="1j8q2za0mia8z1f3n71f9k4q2c1pkjqss5279ryawfzq6zy347k0"; depends=[lattice MASS Matrix moments nor1mix np pbivnorm spatstat spatstat_geom]; }; ROCpsych = derive2 { name="ROCpsych"; version="1.3"; sha256="0fcrhhxmvrrchbswb94liahbgz5pfhs86fbj0vby7vnakrhngh7v"; depends=[pROC reportROC]; }; - ROCwoGS = derive2 { name="ROCwoGS"; version="1.0"; sha256="029nramxwhzqim315g1vkg1zsszzkic28w6ahwg9n7bk9d08adzk"; depends=[]; }; RODBC = derive2 { name="RODBC"; version="1.3-17"; sha256="1xq4lzx1a09lmnd2lwj5z099z3pfg3r7y2da7rf4sd2wyqswi7s6"; depends=[]; }; RODBCDBI = derive2 { name="RODBCDBI"; version="0.1.1"; sha256="0jkcc1lm8drsx1pkfj5h6rlbr98cgpvbf9ndzdwr048f3s8gd26i"; depends=[DBI RODBC]; }; RODM = derive2 { name="RODM"; version="1.1"; sha256="0cyi2y3lsw77gqxmawla5jlm4vnhsagh3ykdgb6izxslc4j2fszx"; depends=[RODBC]; }; @@ -3747,7 +3874,7 @@ in with self; { ROP = derive2 { name="ROP"; version="1.0"; sha256="12gh83r3hp1qdmw3p5rr1wfhsh90pirx67q456gl9ai6zgd8nkq8"; depends=[ROCR]; }; ROSE = derive2 { name="ROSE"; version="0.0-3"; sha256="12b9grh3rgaa07blbnxy8nvy5gvpd45m43bfqb3m4k3d0655jpk2"; depends=[]; }; ROlogit = derive2 { name="ROlogit"; version="0.1.2"; sha256="09j9c24f7plzpnnhpmzdi4gapb7w1377ksjwk6i2xpyr4bfsrr5k"; depends=[evd survival]; }; - ROpenCVLite = derive2 { name="ROpenCVLite"; version="4.30.2"; sha256="1y8hcndm6sk9pg39jfawp14hhhfa8pbdpnari00spl6ixlw7pjjw"; depends=[pkgbuild]; }; + ROpenCVLite = derive2 { name="ROpenCVLite"; version="4.51.0"; sha256="0fi726kan77lwc1jfkgypb58vndrm89pdn80pjyih6sh695cips2"; depends=[pkgbuild]; }; ROpenDota = derive2 { name="ROpenDota"; version="0.1.2"; sha256="17s73yj2w5hlpy09ad83m4s2d9shg5h4zg64wvbp1ivyvpp7l308"; depends=[jsonlite RCurl]; }; ROpenFIGI = derive2 { name="ROpenFIGI"; version="0.2.8"; sha256="0fvd25vsqkgi3jv4s2lnfag5qksyzyb48d7rhfw6z8piz37n4xaj"; depends=[httr jsonlite]; }; ROpenWeatherMap = derive2 { name="ROpenWeatherMap"; version="1.1"; sha256="0h1yw93v06bx8svhghh1fsrf837qax9896klh64b06djpgg9ngb9"; depends=[httr jsonlite RCurl]; }; @@ -3760,10 +3887,10 @@ in with self; { RPCLR = derive2 { name="RPCLR"; version="1.0"; sha256="03kpyszsjb656lfwx2yszv0a9ygxs1x1dla6mpkhcnqw00684fab"; depends=[MASS survival]; }; RPEClust = derive2 { name="RPEClust"; version="0.1.0"; sha256="1ysw45335lrxmj3j17xyvgz76p00v80f2m7wxfndh91wklqxzm8r"; depends=[clue clusteval mclust]; }; RPEGLMEN = derive2 { name="RPEGLMEN"; version="1.1.0"; sha256="0pqfmrnyyxivrzm4xzhma6wrb3zhy34chdalcg8hw5wy92y9gzhd"; depends=[Rcpp RcppEigen RPEIF]; }; - RPEIF = derive2 { name="RPEIF"; version="1.1.0"; sha256="169asw2wsvcbknhmqxni4bjkcvshq70qzkhv0d2h39cvkmbmhagq"; depends=[xts zoo]; }; - RPESE = derive2 { name="RPESE"; version="1.1.0"; sha256="1b8n6y50pzv4w07kchnp5fd4m7j9bqq5085myvwfnm2iklq5yncz"; depends=[boot RPEGLMEN RPEIF sandwich xts zoo]; }; + RPEIF = derive2 { name="RPEIF"; version="1.2.0"; sha256="1lkj6jwra1ydyxbadlic16nsbc0cnha2p4i6ksjrwbhiagy56bh8"; depends=[xts zoo]; }; + RPESE = derive2 { name="RPESE"; version="1.2.0"; sha256="01k0kg4zy9kyasv8g1gdq650abj5sq0mcfan3pc3knxlscdsl5cd"; depends=[boot RobStatTM RPEGLMEN RPEIF xts zoo]; }; RPEXE_RPEXT = derive2 { name="RPEXE.RPEXT"; version="0.0.2"; sha256="1dwblpfm0s4axiggwh4lbz5k1dz7i0d1nqzl70kxj5gnajm7gn1k"; depends=[]; }; - RPEnsemble = derive2 { name="RPEnsemble"; version="0.4"; sha256="0y9g22swcz0m5jbzi87ahxw27fb3jlf3iwvxb73kkzixqlvksw9y"; depends=[class MASS]; }; + RPEnsemble = derive2 { name="RPEnsemble"; version="0.5"; sha256="013dka8f8x9z84j3956l4h6c3afqs0ml14pzpzlsgh5ikby3jhbx"; depends=[class MASS]; }; RPMG = derive2 { name="RPMG"; version="2.2-3"; sha256="1di2bcf58z6gc3xknzx35znsjsy1714swvxkdhlq1ljidbdbmmbl"; depends=[]; }; RPMM = derive2 { name="RPMM"; version="1.25"; sha256="1j48dh434wfhfzka0l21w6f73qlwfm70r9gdddhn504i2d5m4jph"; depends=[cluster]; }; RPPASPACE = derive2 { name="RPPASPACE"; version="1.0.7"; sha256="0h28nxybsyjjd23m1y29559pym2i814n4bvkw5jas1nzbiw85fkw"; depends=[bmp cobs doParallel foreach imager iterators jpeg MASS mgcv png quantreg robustbase tiff]; }; @@ -3771,14 +3898,14 @@ in with self; { RPPanalyzer = derive2 { name="RPPanalyzer"; version="1.4.7"; sha256="16xppv7pzqk6kriqd5ym313z1r61l13dzpxp2q2zi0ai23hjgg92"; depends=[Biobase gam ggplot2 gplots Hmisc lattice limma quantreg]; }; RPS = derive2 { name="RPS"; version="1.0.1"; sha256="16n6wknw2m56kwi6rswgxjwjqblhaz5gyw94f96a7l6navqnvlp4"; depends=[ape geomorph Gmedian igraph MASS matlab]; }; RPostgreSQL = derive2 { name="RPostgreSQL"; version="0.6-2"; sha256="1mdhw5821v2h7hpa53v10wz53k4i90r0vb6a3dia5gq8f9j1h088"; depends=[DBI]; }; - RPostgres = derive2 { name="RPostgres"; version="1.2.1"; sha256="1iky0z2jkvn7x3607hlamqr18rbgsv9ym03fa1sqs0z48bmc24gi"; depends=[BH bit64 blob DBI hms plogr Rcpp withr]; }; + RPostgres = derive2 { name="RPostgres"; version="1.3.2"; sha256="074dp69nza17y46g67swylqnhmsl8kd4zh0zqi4pnszgqj60kykc"; depends=[bit64 blob DBI hms lubridate plogr Rcpp withr]; }; RPresto = derive2 { name="RPresto"; version="1.3.5"; sha256="1fhgiin5fa83gp2lnqhzlg41dy2l0zcvwfy7s73cl4rwkk2x4q1p"; depends=[DBI httr jsonlite openssl Rcpp stringi]; }; RProbSup = derive2 { name="RProbSup"; version="3.0"; sha256="1z53zgx26fwfhb1vxad0l51v34y2lsplhwbjaf4r44rngdaw9h5n"; depends=[]; }; RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.17"; sha256="0krbxalcfg47cmrwfajgbhmn6rs687ranaiq5j0daw7a1k4qdfd8"; depends=[Rcpp RCurl]; }; RPscoring = derive2 { name="RPscoring"; version="0.1.0"; sha256="063w83k9krwv3wvw2iq8bqkhjaj26as14d9g99l8jxfc02ljv1rr"; depends=[]; }; RPtests = derive2 { name="RPtests"; version="0.1.4"; sha256="1r30pslbjq3dip41la81jlin2vhxdmayg902x9ryjy554awfgh7j"; depends=[glmnet randomForest Rcpp]; }; RPublica = derive2 { name="RPublica"; version="0.1.3"; sha256="1w2pn1g44a00ls8kkzj53a739pq6vzp38px2k0yh10rlzimmb21l"; depends=[curl httr jsonlite]; }; - RPushbullet = derive2 { name="RPushbullet"; version="0.3.3"; sha256="0acydm5xc1j6yjmjipfrg7pvc6h0jwihrg1rx97qwddds2xakkxy"; depends=[curl jsonlite]; }; + RPushbullet = derive2 { name="RPushbullet"; version="0.3.4"; sha256="1mx433hvx660a63s5dzn655zmqv1c1qij0hzddl9z38032brc4ii"; depends=[curl jsonlite]; }; RPyGeo = derive2 { name="RPyGeo"; version="1.0.0"; sha256="1alqgx6blqqwxm76w05g82kc2icx8nvjw7qkdz73gf9ckgza5bb3"; depends=[magrittr purrr raster reticulate rmarkdown sf stringr]; }; RQEntangle = derive2 { name="RQEntangle"; version="0.1.3"; sha256="178haddk8nnscy2vym3k2a3ca9lf6nl7rpjja8lxqdjninvhvwb2"; depends=[iterators itertools]; }; RQuantLib = derive2 { name="RQuantLib"; version="0.4.12"; sha256="1bmjgsdwivrvdysba4hq60xpp7xg1c0p1p05mdm0338zvzix5kb8"; depends=[Rcpp zoo]; }; @@ -3786,31 +3913,30 @@ in with self; { RRF = derive2 { name="RRF"; version="1.9.1"; sha256="135adnf7cfs8gddmmmgmzarjzg0qfrd7l67367yhy2b1k0s5ng1w"; depends=[]; }; RRI = derive2 { name="RRI"; version="1.1"; sha256="0msdc5j5vx4snl8r3q5nn0mw2i80jds5pjykhmigcrx6jzg6h6i7"; depends=[Rcpp RcppArmadillo]; }; RRNA = derive2 { name="RRNA"; version="1.0"; sha256="14rcqh95ygybci8hb8ays8ikb22g3850s9f3sgx3r4f0ky52dcba"; depends=[]; }; - RRPP = derive2 { name="RRPP"; version="0.6.1"; sha256="0sm1kp9z1l59r0xq13hv9qaxmrvdz4cg9cl5n46r3yj03paxscpp"; depends=[ape]; }; + RRPP = derive2 { name="RRPP"; version="1.0.0"; sha256="0bnnihbal8w8ayh4s1igdpk3nkwaz5mqp5z4j1snd2ipyx2cy9p7"; depends=[ape ggplot2 Matrix Rcpp]; }; RRRR = derive2 { name="RRRR"; version="1.1.0"; sha256="0h5r668qn8hp4j4zhxhn4b3lqm138n6kc1c7vf95hmbh4ah6wzf7"; depends=[expm ggplot2 magrittr matrixcalc mvtnorm]; }; - RRTCS = derive2 { name="RRTCS"; version="0.0.3"; sha256="1riz1gjx3c0pf17xwybizb94nm5zgmfsnv6np3afvw831mb1x3l9"; depends=[sampling samplingVarEst]; }; + RRTCS = derive2 { name="RRTCS"; version="0.0.4"; sha256="16v6f5yvfq9l1b4h5mr4y0i2k404vdv354yz4k780w79qib7g39p"; depends=[sampling samplingVarEst]; }; RRate = derive2 { name="RRate"; version="1.0"; sha256="1q3f2gphdf50aijnk5xqfpxcqfd4jq7byb1gpb0vcnaxgi3a9lwm"; depends=[]; }; RRedshiftSQL = derive2 { name="RRedshiftSQL"; version="0.1.2"; sha256="03jbml8d19hcg6achnyc4hcnl5j10yvsx59j80r46zyn0flsnizq"; depends=[DBI RPostgreSQL]; }; RRphylo = derive2 { name="RRphylo"; version="2.5.0"; sha256="0bhb4j1sxbww4y6hxi61p0s5npa999lz1x3qjgynzwfaf55p7hvj"; depends=[ape doParallel emmeans foreach geiger phytools]; }; RRreg = derive2 { name="RRreg"; version="0.7.1"; sha256="1mzc9ga5jdh3cf95bxbfy6kdxvqcca74v4hszb63jalzp8w624r9"; depends=[doParallel foreach lme4]; }; - RSA = derive2 { name="RSA"; version="0.10.2"; sha256="082mq3vn75nsxn59b527976x6k2n8sfh78v4i4ncvbnsa7knycc3"; depends=[aplpack ggplot2 lattice lavaan plyr RColorBrewer]; }; + RSA = derive2 { name="RSA"; version="0.10.4"; sha256="0i0li587i6bjnmz9d1j1dyhpy7bfnq6298wr67fygcxfaszij16b"; depends=[aplpack ggplot2 lattice lavaan plyr RColorBrewer]; }; RSADBE = derive2 { name="RSADBE"; version="1.0"; sha256="1nzpm88rrzavk0n8iflsx8r3s1xcry15n80zqdw6jijjycz10w1q"; depends=[]; }; RSAGA = derive2 { name="RSAGA"; version="1.3.0"; sha256="1y1zhy2bxkfsv8vmnxjdg9i5rqkvs32kw8h5z1mclv953srgkpn9"; depends=[gstat magrittr plyr rgdal shapefiles stringr]; }; RSAlgaeR = derive2 { name="RSAlgaeR"; version="1.0.0"; sha256="1hp0v2vkj9ixiv541d53kyl0ph3jsdc5w98r81gv5ck5ixrp6bxp"; depends=[cvTools ggplot2 hydroGOF lubridate mblm plyr]; }; RSBJson = derive2 { name="RSBJson"; version="1.1.2"; sha256="1bzy0pgj6kg447xnnjj643hk8gyzzaaliiw0z98r19959bqbvgq3"; depends=[jsonlite]; }; RSCABS = derive2 { name="RSCABS"; version="0.9.5"; sha256="193wbf1v18xv098i6abpglb239788d9gjzqbn8p3aai0la6y1pk3"; depends=[gWidgets2 gWidgets2RGtk2 R2HTML RGtk2]; }; RSCAT = derive2 { name="RSCAT"; version="1.1.0"; sha256="1sh80zlkwma88kssrlwvb6kpqs2dmhfzkck59fgp0xxgxa3vpram"; depends=[ggplot2 gridExtra Metrics rJava shiny shinycssloaders shinyjs]; }; - RSDA = derive2 { name="RSDA"; version="3.0.4"; sha256="1ps4q3xcyzv5wnwnpwmvvx1gf3ry02rd480gifbfg39km8qwhvgz"; depends=[dplyr FactoMineR forcats ggplot2 ggpolypath glmnet labelled magrittr nloptr princurve purrr randomcoloR reshape RJSONIO rlang scales sqldf stringr tibble tidyselect vctrs XML]; }; + RSDA = derive2 { name="RSDA"; version="3.0.9"; sha256="12ychaaa1n5gam93f5kpxsvsfc9x07znzzz9nrx8bsvgmq4znqf9"; depends=[dplyr e1071 FactoMineR forcats gbm ggplot2 ggpolypath glmnet kknn labelled magrittr neuralnet nloptr princurve purrr randomcoloR randomForest reshape RJSONIO rlang rpart scales sqldf stringr tibble tidyselect vctrs XML]; }; RSE = derive2 { name="RSE"; version="1.3"; sha256="1dvmj1zwkbp1dj9r8kcvbd8rpknfwfdqaqc5gfl82bh823w72099"; depends=[]; }; RSEIS = derive2 { name="RSEIS"; version="3.9-3"; sha256="1wrpsf4cvm34r11ywssnbpcsi56sx4fykkqfhdfb5502agdy2w5w"; depends=[RPMG Rwave]; }; RSGHB = derive2 { name="RSGHB"; version="1.2.2"; sha256="16s9iahbcdqykavm5cq8n76hlpfqlljl17xwh0vrz5ac7z4z3rdz"; depends=[MCMCpack]; }; RSIP = derive2 { name="RSIP"; version="1.0.0"; sha256="1yddqbnz0av69l53y83m7rnznc42qz66fc3qrispzaajs7p9n8d7"; depends=[ncdf4 raster rasterVis rgdal sp]; }; RSKC = derive2 { name="RSKC"; version="2.4.2"; sha256="0r9gpwhzscb6rbba3dg13p78pvskahgvsd59biag0shyii3xvwpm"; depends=[flexclust]; }; RSNNS = derive2 { name="RSNNS"; version="0.4-12"; sha256="1fa32wrhv3q0sdgrcrqrazvvylbn83d75bw8d0ncjfspf7dgx3di"; depends=[Rcpp]; }; - RSNPset = derive2 { name="RSNPset"; version="0.5.3"; sha256="1llx6anwkl4as0hdyvmsrlg9z8mkn9p1qxgs6kqs39w87gyx0j36"; depends=[doRNG fastmatch foreach qvalue Rcpp RcppEigen]; }; RSPS = derive2 { name="RSPS"; version="1.0"; sha256="0ynxhgnxsf27qm8r5d9lyd59zksnc3kvx35hy25vff8j3bg7fqgi"; depends=[gridExtra lattice plyr]; }; RSQL = derive2 { name="RSQL"; version="0.1.4"; sha256="0zda6cgsx1bd3xw2r9flsphbkrgma95qqv5vz70f234y9gkmc6v3"; depends=[DBI knitr lgr R6 RSQLite]; }; - RSQLite = derive2 { name="RSQLite"; version="2.2.1"; sha256="0lynli9144dzb9vhxssba20v7z5h2nirawpvvy8ykv4n3ir7qlsl"; depends=[BH bit64 blob DBI memoise pkgconfig plogr Rcpp]; }; + RSQLite = derive2 { name="RSQLite"; version="2.2.7"; sha256="1j89n4ydv42y5hqqv8nz72sa5wncws074kg527s902k1a67s69ii"; depends=[bit64 blob DBI memoise pkgconfig plogr Rcpp]; }; RSSL = derive2 { name="RSSL"; version="0.9.3"; sha256="10rrgxc0ddnd4b4g7qqgpjkc8gh07bnc94xwmgdp1lx7v7ypcziv"; depends=[cluster dplyr ggplot2 kernlab MASS Matrix quadprog Rcpp RcppArmadillo reshape2 scales tidyr]; }; RSSOP = derive2 { name="RSSOP"; version="1.1"; sha256="119xrxpaf68qdb2kj2pbaja6im2nbxsgibb1bnlpnc3fcxkmqcsf"; depends=[]; }; RSSampling = derive2 { name="RSSampling"; version="1.0"; sha256="0p10l7qmksx4ysz1jb84f9nbqzig8wxhwy33yk8hq29nb5i4c9ik"; depends=[LearnBayes]; }; @@ -3824,7 +3950,8 @@ in with self; { RSentiment = derive2 { name="RSentiment"; version="2.2.2"; sha256="15d1llzxg1apkwykpb7pic2d5lfj9i9a55hab067wrz2yq5jsyfa"; depends=[NLP openNLP plyr stringr]; }; RSiena = derive2 { name="RSiena"; version="1.2-23"; sha256="04picf0f9rahd37r9fm0cisgaiy2aqshnzfh7cvhcqfaqmpxc8kp"; depends=[lattice MASS Matrix]; }; RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.16"; sha256="1plcmxj6sahdy3vvcmxry8cbq1j23bqzhnhn593bkwmzczka24cy"; depends=[base64enc digest httr jsonlite plyr stringr]; }; - RSmallTelescopes = derive2 { name="RSmallTelescopes"; version="1.0.2"; sha256="0g8h518vzgnxyasb2xqh2hxbmfzhdv3silp084xkmylbgj1hh5cd"; depends=[]; }; + RSizeBiased = derive2 { name="RSizeBiased"; version="0.1.0"; sha256="0qh1f9998c62cph590mszbwh12mpbvcnvffmxw4mib6wd4dgl723"; depends=[pracma]; }; + RSmallTelescopes = derive2 { name="RSmallTelescopes"; version="1.0.4"; sha256="16c0pfq9qp0c9b7aljp753iilk3dys14h77anwps8xg7j2lizvbh"; depends=[]; }; RSmartlyIO = derive2 { name="RSmartlyIO"; version="0.1.3"; sha256="02zswadv65a5p5q9rr12f819mh7jjqk8xj1kc1c0wqvr8dgz7fx9"; depends=[RCurl]; }; RSocrata = derive2 { name="RSocrata"; version="1.7.10-6"; sha256="1pzdpy1mifr6hhhj7pq8l5jl8dsn6270ibm6pnmc66psh0xr2zsa"; depends=[httr jsonlite mime plyr]; }; RSpectra = derive2 { name="RSpectra"; version="0.16-0"; sha256="1ab45as2ysjrvkhvmx7y3nbhd0y1w4j9k2a789lcd973zz4wzwda"; depends=[Matrix Rcpp RcppEigen]; }; @@ -3843,18 +3970,20 @@ in with self; { RTConnect = derive2 { name="RTConnect"; version="0.1.4"; sha256="1000jmmqzyhl6vh1ii75jdh88s9inaz52gvfwcin2k2zr7bi91ba"; depends=[]; }; RTD = derive2 { name="RTD"; version="0.4.1"; sha256="0zsv62hx1y9q5a6rd8ri91ff64671b84jr3f88h0q4yni2mribhr"; depends=[dplyr httr jsonlite purrr RcppMsgPack readr urltools uuid]; }; RTDE = derive2 { name="RTDE"; version="0.2-1"; sha256="1dkv0g760384jmyypffl5kbnsancjx272j91ffpgmg3lmsy8nhqq"; depends=[]; }; - RTL = derive2 { name="RTL"; version="0.1.5"; sha256="162mwjlhl0py3lr4yrd56ips31kpfsgq0jmg9scm3pakbv63m9ad"; depends=[dplyr fabletools feasts fitdistrplus forecast ggplot2 httr jsonlite lpSolve lubridate magrittr PerformanceAnalytics plotly purrr Quandl quantmod RCurl readr rlang rugarch sp stringr tibble tibbletime tidyquant tidyr timetk tsibble xts zoo]; }; + RTIGER = derive2 { name="RTIGER"; version="0.99.0"; sha256="0g1qccjslf90lsc965klnkdkij16frfk3ig6yjpldh8j2yv66zg3"; depends=[e1071 GenomeInfoDb GenomicRanges ggplot2 IRanges JuliaCall qpdf reshape2 TailRank]; }; + RTL = derive2 { name="RTL"; version="0.1.6"; sha256="0f80sarkwslng7m68vjzis0y9zz77f0hvmj9fbpgkl683cvjcvcr"; depends=[dplyr fabletools feasts fitdistrplus forecast ggplot2 httr jsonlite lpSolve lubridate magrittr PerformanceAnalytics purrr Quandl quantmod RCurl readr rlang rugarch sp stringr tibble tibbletime tidyquant tidyr timetk tsibble xts zoo]; }; RTOMO = derive2 { name="RTOMO"; version="1.1-6"; sha256="03jb96ahzgp662vj2v65giv8ss61vad5w26kvq8hg9q06z879jza"; depends=[GEOmap RPMG RSEIS splancs]; }; - RTaxometrics = derive2 { name="RTaxometrics"; version="3.0"; sha256="0dm0ashxxz59ri9xk9vhn7671khp35gx16lkl6vjgpfwczhl0mc5"; depends=[]; }; + RTaxometrics = derive2 { name="RTaxometrics"; version="3.2"; sha256="0nrj5iccxqj3nk28s9z6bncpih5zq2nz4pylmm0pkpl5dfz923m4"; depends=[]; }; RTextTools = derive2 { name="RTextTools"; version="1.4.3"; sha256="0fxjviqc36k06rn8xzbi8ylzzj9zgf3zsp6xv0kssakss1a45lzz"; depends=[caTools e1071 glmnet ipred nnet randomForest SparseM tau tm tree]; }; RTextureMetrics = derive2 { name="RTextureMetrics"; version="1.1"; sha256="0d0mvpmcpd62cvqlajrqp32lnvpflyf9bqvdzly2v8v1kb8274fc"; depends=[]; }; - RTransferEntropy = derive2 { name="RTransferEntropy"; version="0.2.13"; sha256="17xmz8579xs4plc034c9cgc200g8sgvb3zmhzbina6psn72wl2fx"; depends=[future future_apply Rcpp]; }; + RTransferEntropy = derive2 { name="RTransferEntropy"; version="0.2.14"; sha256="0sy2jgdy8lmvazgyv196z327r14202243f5g8wl4nck737x0i7qh"; depends=[future future_apply Rcpp]; }; RTriangle = derive2 { name="RTriangle"; version="1.6-0.10"; sha256="07ya95gmv53i2argqwgad6wd4sslql2wl1rkvsmgsvmhsb4wp9hd"; depends=[]; }; + RUVIIIC = derive2 { name="RUVIIIC"; version="1.0.19"; sha256="1px87p4nmdgkxwarsqyc91kmwr13dy16c1qqqc86qlwm2w46smf6"; depends=[progress Rcpp RcppEigen RcppProgress RSpectra]; }; RUnit = derive2 { name="RUnit"; version="0.4.32"; sha256="1wc1gwb7yw7phf8b0gkig6c23klya3ax11c6i4s0f049k42r78r3"; depends=[]; }; - RVA = derive2 { name="RVA"; version="0.0.3"; sha256="0w146albda4n74nn8h7jz62k5xmr6shibbgymyby0jphwc30fbc7"; depends=[circlize clusterProfiler ComplexHeatmap data_table dplyr edgeR ggplot2 ggpubr gridExtra GSEABase GSVAdata haven msigdbr org_Hs_eg_db plotly purrr rlang rWikiPathways stringr tibble tidyr XML]; }; - RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-78"; sha256="1kiyczn1y3hxpf6shdy2s248848wvna6zhpkx7ng6hkdfkj8nfiy"; depends=[ade4 boot car FactoMineR lme4 MASS mixOmics nnet pls pspearman vegan]; }; + RVA = derive2 { name="RVA"; version="0.0.4"; sha256="1j5rdpa4w1k67xzjsja7ysd5j8r3dyvjvigfn7cas4alcdmafnsi"; depends=[circlize clusterProfiler ComplexHeatmap data_table dplyr edgeR ggplot2 ggpubr gridExtra GSEABase GSVAdata haven msigdbr org_Hs_eg_db plotly purrr rlang rWikiPathways stringr tibble tidyr XML]; }; + RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-79"; sha256="0ij5qr921gbwna63na4rws4bp68ri5q98cn63apnbsii07jzw716"; depends=[ade4 boot car FactoMineR lme4 MASS mixOmics nnet pls pspearman vegan]; }; RVFam = derive2 { name="RVFam"; version="1.1"; sha256="0gw8rgq11zndnqmay6y3y5rmmljvwhxzm2pqa90vs5413dnchq92"; depends=[coxme kinship2 lme4 MASS Matrix survival]; }; - RVIpkg = derive2 { name="RVIpkg"; version="0.1.1"; sha256="0kgjp79n8pxff2b36xnsz1hgb0kbwwvy8vc5dizinmh3fqr9bmqa"; depends=[]; }; + RVIpkg = derive2 { name="RVIpkg"; version="0.2.3"; sha256="02r576p17b3bmz4i839myvszrmnv0vdar4g094vqjaf5d8wflj0p"; depends=[]; }; RVenn = derive2 { name="RVenn"; version="1.1.0"; sha256="016m00xv59lkwm2is32v5nr4lw5a1ymdnz34r3ffflcv9bfrc6n4"; depends=[ggforce ggplot2 magrittr pheatmap purrr rlang vegan]; }; RVerbalExpressions = derive2 { name="RVerbalExpressions"; version="0.1.0"; sha256="1p9wmpgqwnz95sr8km8y6kqax8fcz6sqg54wfdx44kiqkf1ybdsp"; depends=[magrittr]; }; RVideoPoker = derive2 { name="RVideoPoker"; version="0.3"; sha256="06s4dlw0pw8rcq5b31xxqdpdk396rf27mai2vpvmn585vbm1ib7a"; depends=[pixmap rpanel tkrplot]; }; @@ -3868,25 +3997,29 @@ in with self; { RWekajars = derive2 { name="RWekajars"; version="3.9.3-2"; sha256="06nsylv65z9hxym1b6qnwllh306bq5phsgr0qn4nyr5im8cv1rhn"; depends=[rJava]; }; RWiener = derive2 { name="RWiener"; version="1.3-3"; sha256="0afrgflyfjv4jqm04had74zz4cs934zwvyxaan1r4qpg383kibpq"; depends=[]; }; RWildbook = derive2 { name="RWildbook"; version="0.9.3"; sha256="1pznzmv8n33hhj61h07fha1gzafcx705n8323cnz3mx6ziijfh28"; depends=[data_table jsonlite marked]; }; + RWmisc = derive2 { name="RWmisc"; version="0.1.0"; sha256="11k27db09zg7p72lhp1yva1g32bmbw1i4ys2wm7gi918jljjwm8v"; depends=[raster sf sp units]; }; RWsearch = derive2 { name="RWsearch"; version="4.8.0"; sha256="0zbf03dhcmbyrs2yhl3phk65471qnd7iszvk9rn81fqhd522vq66"; depends=[brew latexpdf networkD3 sig sos XML]; }; RXKCD = derive2 { name="RXKCD"; version="1.9.2"; sha256="1yk12ic6kdbwc44ppag2yfnga7xjmifkglhvcw93vc3qg469mm15"; depends=[jpeg plyr png RJSONIO]; }; RXMCDA = derive2 { name="RXMCDA"; version="1.5.5"; sha256="1ci73q8xf3xxqw8b7sk83v5vz2cqgcb4lkx7qi3hd1ff4xkz1fpa"; depends=[kappalab XML]; }; - RXshrink = derive2 { name="RXshrink"; version="1.5"; sha256="0mffiscf65fyf2xs9w61nzxhrg55ybsxsa0rqy7y2h2hgvbh5wi4"; depends=[ellipse lars]; }; + RXshrink = derive2 { name="RXshrink"; version="2.0"; sha256="105laxdjnqpkp74675asihcry6ahaihphkbnpxyi6xpskga0k1ka"; depends=[ellipse lars]; }; RYandexTranslate = derive2 { name="RYandexTranslate"; version="1.0"; sha256="0qrv5mnnkn5fs7vx6i74z46s0qj9f98km5bizgj00832qyrq8q1s"; depends=[httr jsonlite RCurl]; }; RYoudaoTranslate = derive2 { name="RYoudaoTranslate"; version="1.0"; sha256="1i3iyqh97vpn02bm66kkmw52ni29js30v18n2aw8pvr88jpdgxm4"; depends=[RCurl rjson]; }; RZabbix = derive2 { name="RZabbix"; version="0.1.0"; sha256="0c5803chpzvp7dk9pjfx5f0nqynb76ywakz04ah2nw07ypvcyjyr"; depends=[httr jsonlite]; }; RZigZag = derive2 { name="RZigZag"; version="0.2.1"; sha256="1civ8qrk5y95775vzkd2m5arqczgan584r632ixy4q76nd5wa8zc"; depends=[Rcpp RcppEigen]; }; - RZooRoH = derive2 { name="RZooRoH"; version="0.2.3"; sha256="0ihfc8hxqmlkx1xhkz3psw8szwjp01imasvynxbzrjmjf4q6amvq"; depends=[data_table doParallel foreach iterators RColorBrewer]; }; + RZooRoH = derive2 { name="RZooRoH"; version="0.3.0"; sha256="0k6xqd48ca2vq4sll9m51iyjqjqrm8kz0n3yi4q1r7czarj4nb5s"; depends=[data_table doParallel foreach iterators RColorBrewer]; }; + RaJIVE = derive2 { name="RaJIVE"; version="1.0"; sha256="1r3csf3xpk6rx494bqamb9b8dhj1169cng6gdi52h62m8vchnak5"; depends=[doParallel foreach ggplot2]; }; + RaMS = derive2 { name="RaMS"; version="1.0.0"; sha256="101vdghn18w2cj8n5bm1gd81c298w2drs1d2sjaijkji7i74z2c6"; depends=[base64enc data_table xml2]; }; RaProR = derive2 { name="RaProR"; version="1.1-5"; sha256="11hwg609pjcd13qnbchbs86c3q8f4nmh1xfxg3dsiijljl6lzx3n"; depends=[]; }; - RaSEn = derive2 { name="RaSEn"; version="1.1.0"; sha256="0l7k90w4c4xsyr08n93nxnl7jk4818fl6a5kjxbiqzd8f6814q16"; depends=[caret class doParallel e1071 FNN foreach formatR ggplot2 gridExtra MASS nnet randomForest rpart]; }; - RaceID = derive2 { name="RaceID"; version="0.2.2"; sha256="0602qx6hcdw6yxm49zwf7ri9g18ckqynkmv8s3v81lv612wlcd7w"; depends=[cluster coop FateID FNN fpc ggplot2 ica igraph irlba locfit MASS Matrix pheatmap propr quadprog randomForest RColorBrewer Rcpp Rtsne umap vegan]; }; - RadData = derive2 { name="RadData"; version="1.0.0"; sha256="14npn5vjcpvymdjkby83msjr3f1gsmzh0083gz6cgrp270fglkaw"; depends=[]; }; + RaSEn = derive2 { name="RaSEn"; version="2.1.0"; sha256="11bda14r5mzrvrlswvc5ycpjc064cs23njzsc3g8pm70kbsqfji5"; depends=[caret class doParallel e1071 FNN foreach formatR ggplot2 gridExtra KernelKnn MASS nnet randomForest ranger rpart]; }; + RaceID = derive2 { name="RaceID"; version="0.2.3"; sha256="19mbi56n80zirl8xzk5f1fqjcw9s1362vjmz62w1sh3cvilryldw"; depends=[cluster coop FateID FNN fpc ggplot2 ica igraph irlba locfit MASS Matrix matrixStats pheatmap propr quadprog randomForest RColorBrewer Rcpp Rtsne umap vegan]; }; + RadData = derive2 { name="RadData"; version="1.0.1"; sha256="053i6r0j58dws1qisl2701n0fwzrfn5brdx3dcab8xmpzg6s0036"; depends=[]; }; RadOnc = derive2 { name="RadOnc"; version="1.1.5"; sha256="0yz2pzcpz32xs04xfs90i714nn28cky7701w1h99cqsxsp892jkq"; depends=[geometry oro_dicom ptinpoly rgl]; }; RadTran = derive2 { name="RadTran"; version="1.0"; sha256="1sb8d4y3b37akbxhdavxrkp34zn3ip061b7gzy0ga57pyn76cvpn"; depends=[ReacTran rootSolve]; }; RadialVisGadgets = derive2 { name="RadialVisGadgets"; version="0.2.0"; sha256="18a2c89jpdaln9cl5y4w161121fld08wm57m40qacsj1vlnkh6j9"; depends=[caret dplyr ggplot2 miniUI r_import rlang shiny shinyjs shinyscreenshot tidyr]; }; RadioSonde = derive2 { name="RadioSonde"; version="1.4"; sha256="1v9jdpynmb01m3syhas1s08xxlvjawhlvjkyhils2iggi4xw4hiq"; depends=[]; }; Radviz = derive2 { name="Radviz"; version="0.9.2"; sha256="1k4bykrs6932n2iz2nngbs2k45ra7nq3rpxw4acpvxwxfciiq3ia"; depends=[dplyr ggplot2 hexbin igraph pracma Rcpp RcppArmadillo rlang]; }; RagGrid = derive2 { name="RagGrid"; version="0.2.0"; sha256="0crnpd75lyhd0awzqzqy7bzw4ydgxpyhy1ybb1ff4qsnisbjdbba"; depends=[crosstalk htmltools htmlwidgets knitr]; }; + Rage = derive2 { name="Rage"; version="1.0.0"; sha256="1x98y3mrncjq5c1xbfx2b0skng03c0hsgylsakm8qgviwmfa7v08"; depends=[DiagrammeR MASS popbio popdemo Rcompadre]; }; RainfallErosivityFactor = derive2 { name="RainfallErosivityFactor"; version="0.1.0"; sha256="16yrr2bl62m1nr81nzvmdq7s78f7fg50dah5dg5q4j4j7z8qfsqz"; depends=[]; }; Ramble = derive2 { name="Ramble"; version="0.1.1"; sha256="0225za85i5nvf8l89i5bz7nxsxykd3v9fp1wgihmncca6n8vhgpl"; depends=[]; }; Rambo = derive2 { name="Rambo"; version="1.1.1"; sha256="036rvjj6gcnf2gg5xl55n5p8j1pzifb9wmlpwnymz1csxgkl477i"; depends=[sna]; }; @@ -3896,29 +4029,30 @@ in with self; { RandomCoefficients = derive2 { name="RandomCoefficients"; version="0.0.2"; sha256="04l0aczrlbkjk0687w2gxs85ia71yy69mgankwkl37ksznh6y81m"; depends=[fourierin ks orthopolynom polynom RCEIM rdetools robustbase sfsmisc snowfall statmod tmvtnorm VGAM]; }; RandomFields = derive2 { name="RandomFields"; version="3.3.8"; sha256="1l4r67vmdisdawlhv6l4lqsn5i8wg2p1hs7v5553b3j2mvyy424a"; depends=[RandomFieldsUtils sp]; }; RandomFieldsUtils = derive2 { name="RandomFieldsUtils"; version="0.5.3"; sha256="0783z23rm5kv0x7796ggx6g07wpf18n7fjzv9r9ryji55sx3r0pa"; depends=[]; }; + RandomForestsGLS = derive2 { name="RandomForestsGLS"; version="0.1.2"; sha256="1wq926byha1365hj8v1q3ady921pwar6lkb1wx2mhazmdn7aqy10"; depends=[BRISC matrixStats pbapply randomForest]; }; RanglaPunjab = derive2 { name="RanglaPunjab"; version="2.3.4"; sha256="01j3gww9kil02d44jwlkz6j7lwn2him830bnshkly0s7mgh22pgr"; depends=[jpeg shiny tidyverse]; }; RankAggreg = derive2 { name="RankAggreg"; version="0.6.6"; sha256="1g70njfv776qgp3i52kr6yxg7x9qliqaj33jm5vkgbajw1ampsdx"; depends=[gtools]; }; RankAggregator = derive2 { name="RankAggregator"; version="0.0.1"; sha256="0j4s4fv28fbc6ij6fzpmza9n5lfrql8ll33fi65vhczz9pjhpjii"; depends=[]; }; RankResponse = derive2 { name="RankResponse"; version="3.1.1"; sha256="04s588zbxcjgvpmbb2x46bbf5l15xm7pwiaxjgc1kn1pn6g1080c"; depends=[]; }; - Rankcluster = derive2 { name="Rankcluster"; version="0.94.4"; sha256="0hdyyncb39a8kl34mj1f296dafng8krk7fbggsj5wg2s181fnqb5"; depends=[Rcpp RcppEigen]; }; - RankingProject = derive2 { name="RankingProject"; version="0.2.0"; sha256="1y2sydppi7y7j9c7r6xcqfm4v9z646w48pnksf11da8lq2nczww8"; depends=[]; }; + Rankcluster = derive2 { name="Rankcluster"; version="0.94.5"; sha256="1ddfcmiqy20s7sfjbxax0rvc9vb1ckr46icy1zsa103hhbp5pjqb"; depends=[Rcpp RcppEigen]; }; + RankingProject = derive2 { name="RankingProject"; version="0.3.1"; sha256="11n5v8hnpldwkb5fz3y0nfjcrshns49yrrdf9205y7g80r34wmg7"; depends=[]; }; RapidPolygonLookup = derive2 { name="RapidPolygonLookup"; version="0.1.1"; sha256="0h4snn3haa4a5rkafg98419by4nnz219wsm3y0dqgm4hw4bvha0g"; depends=[PBSmapping RANN RgoogleMaps sp]; }; RapidoPGS = derive2 { name="RapidoPGS"; version="1.0.2"; sha256="1lqvf563zzy5i0sljw7jqwilsj78yqnq821ghm0aqs9ixn5f9gn2"; depends=[bigsnpr curl data_table GenomicRanges IRanges RCurl]; }; Raquifer = derive2 { name="Raquifer"; version="0.1.0"; sha256="148inkn6yiyvicw0b4kw99n172xsvhrrdx1khghqs966smjw54wy"; depends=[dplyr gsl magrittr pracma Rdpack]; }; - Rarefy = derive2 { name="Rarefy"; version="1.0"; sha256="0zc1aab7cf9fnx0fq4rz236y5jfip09d26c8vrhk9v8p7ivm8hb1"; depends=[ade4 adiv dplyr geiger vegan]; }; + Rarefy = derive2 { name="Rarefy"; version="1.1"; sha256="1flpi5amv2q2kl75gab4bwv1b7nmsnr6lyanwwiky6zq0xridkw5"; depends=[ade4 adiv ape dplyr geiger vegan]; }; Rarity = derive2 { name="Rarity"; version="1.3-6"; sha256="1m742qrgc0c5vda9sb2q5n3ghmqnlnfhr1cfpxfs7s5ic707gmlb"; depends=[]; }; RaschSampler = derive2 { name="RaschSampler"; version="0.8-8"; sha256="0y7dkgv1cy6r1mbmyqm27qwl10rl12g1svpx9jkzq5hq0hnm2xhw"; depends=[]; }; Rata = derive2 { name="Rata"; version="0.0.2"; sha256="1s7am08691lil5hbd8jpa5wnbvr0qqf0gkxczpm6yvizbjpx16qx"; depends=[ggplot2 glpkAPI lpSolveAPI reshape2 Rirt]; }; - RatingScaleReduction = derive2 { name="RatingScaleReduction"; version="1.2.2"; sha256="15xkfjp0bkx9wjp8y27vs0iq2ir4qxjdl8405ix59sjb6lkvv3l2"; depends=[ggplot2 pROC]; }; + RatingScaleReduction = derive2 { name="RatingScaleReduction"; version="1.4"; sha256="1d37l4xgg1iba2rbhp4c5i7igrcy0zgbdvzk3yc0wj2x1mm5dayk"; depends=[ggplot2 pROC]; }; RationalExp = derive2 { name="RationalExp"; version="0.2.2"; sha256="0a51sfps3sfb71m93jdsmbvj6kafbyfrq790ix238j570f5xafpg"; depends=[snowfall]; }; - Ravages = derive2 { name="Ravages"; version="0.1.1"; sha256="0gpmml2y8ai6nkdm6h54yfg3ymjlh5aq4q52sxn0v636krgbmixx"; depends=[BH dfidx Formula gaston mlogit Rcpp RcppEigen RcppParallel]; }; + Ravages = derive2 { name="Ravages"; version="0.1.3"; sha256="0vqx1qz2km8frigxbpvn16sq3nlaizz558c2661jdpwrd95hr4dg"; depends=[BH dfidx Formula gaston mlogit Rcpp RcppEigen RcppParallel]; }; RavenR = derive2 { name="RavenR"; version="2.0.1"; sha256="0kp5gfs4jfsl05cly79j5gpqbjdik6d3idknlyn86cd837mzc2dc"; depends=[colorspace cowplot deldir dplyr dygraphs gdata ggplot2 igraph lubridate magrittr ncdf4 purrr reshape2 rgdal rgeos scales sf sp xts zoo]; }; Rbeast = derive2 { name="Rbeast"; version="0.2.2"; sha256="12i6jm7x1hwkj6skva9sli02rm4krzb2gmzny68d9cjhdcan5baq"; depends=[]; }; Rbent = derive2 { name="Rbent"; version="0.1.0"; sha256="0xkb57dhhfd3342rv0xwbhbhn4zp5fbfch84fbh0sickm09l9vrj"; depends=[Rfit]; }; Rbgs = derive2 { name="Rbgs"; version="0.2"; sha256="1q0dnbcpgx7x9klr6z33z6g2p9p8mrmhnsqjy6qw15ch720rrgn3"; depends=[imager magrittr rJava]; }; Rbitcoin = derive2 { name="Rbitcoin"; version="0.9.2"; sha256="0ndq4kg1jq6h0jxwhpdp8sw1n5shg53lwa1x0bi7rifmy0gnh66f"; depends=[data_table digest RCurl RJSONIO]; }; RblDataLicense = derive2 { name="RblDataLicense"; version="0.2.3"; sha256="1bkb4q2drz12j2saqq9basm8mw4wx5my28nnyiijrgmwmsd6hp9k"; depends=[RCurl xts]; }; - Rblpapi = derive2 { name="Rblpapi"; version="0.3.10"; sha256="14wkrjfbjc3rb3159sz8wdvshmrh3d17s01swp59s8if7hr94hq0"; depends=[BH Rcpp]; }; + Rblpapi = derive2 { name="Rblpapi"; version="0.3.11"; sha256="0vfvp0v3nr90l39y93z86fqm93fbkasc5rd61k912qfbw73l8h7w"; depends=[BH Rcpp]; }; Rborist = derive2 { name="Rborist"; version="0.2-3"; sha256="0qf4m6ibr4mlrmsybb5b8f1hkmp9n6ksjsxc4msd3q4rr99zkczk"; depends=[data_table digest Rcpp]; }; Rcan = derive2 { name="Rcan"; version="1.3.82"; sha256="0asmlhh786c9gfgxkqybv8xzz8bqzirxvq8nr4gglx1pc812idkb"; depends=[data_table ggplot2 scales]; }; Rcapture = derive2 { name="Rcapture"; version="1.4-3"; sha256="1rk1zgab6zi7hcmyqlb18kycv3cd15c7lwhw5kig96f2n3xymzig"; depends=[]; }; @@ -3933,7 +4067,8 @@ in with self; { RcmdrMisc = derive2 { name="RcmdrMisc"; version="2.7-1"; sha256="1djm21mfk1l8zmaz6p51li0swpvzs05z9p11ad83d5rbbkdpwl7w"; depends=[abind car colorspace e1071 foreign haven Hmisc lattice MASS nortest readstata13 readxl sandwich]; }; RcmdrPlugin_BWS1 = derive2 { name="RcmdrPlugin.BWS1"; version="0.1-4"; sha256="1iaywd6wvz41whxzpncbvzyg0k8bgi04banna59pz115dqaqwpmd"; depends=[crossdes Rcmdr support_BWS support_CEs survival]; }; RcmdrPlugin_BiclustGUI = derive2 { name="RcmdrPlugin.BiclustGUI"; version="1.1.3"; sha256="1v0vdr6rffcq5qjqwmnmxbjwcf01zp7lrj81grnjxwqg4xjrcj69"; depends=[BcDiag BiBitR BicARE biclust fabia gplots iBBiG Rcmdr s4vd superbiclust viridis]; }; - RcmdrPlugin_DCCV = derive2 { name="RcmdrPlugin.DCCV"; version="0.1-0"; sha256="0bxq1ar2l7222pd5zqibza8qmqgv26lvacc297qfc0nyyj761ghp"; depends=[DCchoice Rcmdr]; }; + RcmdrPlugin_DCCV = derive2 { name="RcmdrPlugin.DCCV"; version="0.1-1"; sha256="1snlzffs9f300iyxsbarykc53pfa8h9qsk354xki7n0wz5jp1lc3"; depends=[DCchoice Rcmdr]; }; + RcmdrPlugin_DCE = derive2 { name="RcmdrPlugin.DCE"; version="0.1-2"; sha256="04c6xig7a8rbwy1cwahxxk5x5vzdijrq0dl2hr8dlivpyv2pjq73"; depends=[Rcmdr support_CEs survival]; }; RcmdrPlugin_DoE = derive2 { name="RcmdrPlugin.DoE"; version="0.12-3"; sha256="1iifn71kjjgcp7dfz2pjq57mgbv4rrznrl3b3k9gdc2dva1z9zvc"; depends=[DoE_base DoE_wrapper FrF2 Rcmdr RcmdrMisc relimp]; }; RcmdrPlugin_EACSPIR = derive2 { name="RcmdrPlugin.EACSPIR"; version="0.2-2"; sha256="10r6rb0fwlilcnqxa38zh7yxc54x1a0by5x4f6gzdn9zs7aj5l1r"; depends=[abind ez nortest R2HTML Rcmdr RcmdrMisc reshape]; }; RcmdrPlugin_EBM = derive2 { name="RcmdrPlugin.EBM"; version="1.0-10"; sha256="02zips1jbfn7cshjlrm1gr632px2zxlys8i0f1nrf1gifl44v1qw"; depends=[abind epiR Rcmdr]; }; @@ -3952,12 +4087,12 @@ in with self; { RcmdrPlugin_PcaRobust = derive2 { name="RcmdrPlugin.PcaRobust"; version="1.1.4"; sha256="17rq3sv8payazjjn5j37cgd6df5b62d2y8al3grw6hw5nfba7lvn"; depends=[Rcmdr robustbase rrcov tkrplot]; }; RcmdrPlugin_RMTCJags = derive2 { name="RcmdrPlugin.RMTCJags"; version="1.0-2"; sha256="04g5a1dpch54k5ckfkrg4vsap1nc3af1i0i559qigv3hy8n7pm80"; depends=[coda igraph Rcmdr rjags rmeta runjags]; }; RcmdrPlugin_ROC = derive2 { name="RcmdrPlugin.ROC"; version="1.0-18"; sha256="0alwsvwry4k65ps00zvdqky9rh663bbfaw15lhwydbgcpqdkn2n6"; depends=[pROC Rcmdr ResourceSelection ROCR]; }; - RcmdrPlugin_RiskDemo = derive2 { name="RcmdrPlugin.RiskDemo"; version="2.0"; sha256="1mclhcb138f13p7ghiggdm8zjrgxqrn3zn8biygfy6yvhw2j396p"; depends=[demography ftsa Rcmdr rgl]; }; + RcmdrPlugin_RiskDemo = derive2 { name="RcmdrPlugin.RiskDemo"; version="3.0"; sha256="1l065hqcd84vl0147yyysyyh7k45rypzlrfrn16c9486ynjkbc45"; depends=[data_table demography dplyr forecast ftsa ggplot2 Rcmdr scales zoo]; }; RcmdrPlugin_SCDA = derive2 { name="RcmdrPlugin.SCDA"; version="1.2.0"; sha256="1yg2b5vcnf956w04phxg15a4my9hvkbc27nzyn30b2wn47ysxghj"; depends=[Rcmdr SCMA SCRT SCVA]; }; RcmdrPlugin_SLC = derive2 { name="RcmdrPlugin.SLC"; version="0.2"; sha256="1nwpzmgfla1y05dxf81w0wmvvmvcq5jn5k8phlq30920ia7ybs8g"; depends=[Rcmdr SLC]; }; RcmdrPlugin_TeachStat = derive2 { name="RcmdrPlugin.TeachStat"; version="1.1.0"; sha256="1djyiqj7k96csrbzql5gmi5dca3c8rf3ymskfskrx62zpxmn4xic"; depends=[distr distrEx Hmisc IndexNumR lme4 randtests Rcmdr tcltk2 tseries]; }; RcmdrPlugin_TeachingDemos = derive2 { name="RcmdrPlugin.TeachingDemos"; version="1.2-0"; sha256="14zsqjni2w2smq99cv1pjdw90zw83g4nn7h7cn07fms9j0g12yd6"; depends=[Rcmdr TeachingDemos]; }; - RcmdrPlugin_UCA = derive2 { name="RcmdrPlugin.UCA"; version="4.2-6"; sha256="1fdy1xvrfjy2yz9ihhayj3d0avyx8xqlblb2wv73fmqvnvihag49"; depends=[randtests Rcmdr rmarkdown TeachingDemos tseries]; }; + RcmdrPlugin_UCA = derive2 { name="RcmdrPlugin.UCA"; version="4.4-3"; sha256="0rw8nxh714cb3p448hrxad61l2zrmkvhxba912c5m9qjrx5pnhq5"; depends=[IQCC qcc qicharts2 randtests Rcmdr rmarkdown TeachingDemos tseries]; }; RcmdrPlugin_WorldFlora = derive2 { name="RcmdrPlugin.WorldFlora"; version="1.1"; sha256="1cv580ar1kp0174h2mcg05nrr1d8sdlmimhyzk908gjhghmi6ahj"; depends=[Rcmdr WorldFlora]; }; RcmdrPlugin_aRnova = derive2 { name="RcmdrPlugin.aRnova"; version="0.0.5"; sha256="0ys3565pcbr554yb1gi2h149vhvwc0gdfmh7mz8zzd4367hqn553"; depends=[Rcmdr]; }; RcmdrPlugin_coin = derive2 { name="RcmdrPlugin.coin"; version="1.0-22"; sha256="0qmdjnjmgq52wgl4llg69q9x7hvwd73mz3swv0sv88v8zqg7xj93"; depends=[coin multcomp Rcmdr survival]; }; @@ -3973,30 +4108,32 @@ in with self; { RcmdrPlugin_sutteForecastR = derive2 { name="RcmdrPlugin.sutteForecastR"; version="1.0.0"; sha256="1np42kizkk572vharki84ka34lr7bdlckn4227bnq2l37c0zsq5y"; depends=[Rcmdr sutteForecastR]; }; RcmdrPlugin_temis = derive2 { name="RcmdrPlugin.temis"; version="0.7.10"; sha256="02rs5xdj6g57frndc87fly0ans16584j4d0rfpy1h72655cz66ab"; depends=[ca lattice latticeExtra NLP R2HTML Rcmdr RColorBrewer slam stringi tcltk2 tm zoo]; }; Rcolombos = derive2 { name="Rcolombos"; version="2.0.2"; sha256="0l92icjqqm5fxafqwd09lnmv5x6kvjdg8cphlm37q86nslwr5rkk"; depends=[httr]; }; + Rcompadre = derive2 { name="Rcompadre"; version="1.0.0"; sha256="106kwhycd4g7rnip0fiw4f9d3qfssqwrqk5mhabwjdgvki33dryi"; depends=[popdemo tibble]; }; Rcplex = derive2 { name="Rcplex"; version="0.3-3"; sha256="0abmrqphrpdlc831hwbwx15z4vdgn385kxhnqlbb9v0sjmfyszsl"; depends=[slam]; }; - Rcpp = derive2 { name="Rcpp"; version="1.0.5"; sha256="012wbj446k1wz6bp6bpf6h77ypvcsw69xvnax6qf6vyc7dj2qimq"; depends=[]; }; + Rcpp = derive2 { name="Rcpp"; version="1.0.6"; sha256="04ph6lm36cmvz01ng53pvvf3jxvzsn9smyflkfc7l3q0pib4gwn9"; depends=[]; }; Rcpp11 = derive2 { name="Rcpp11"; version="3.1.2.0.1"; sha256="0vw41plcl7hbi0af3la0sb4x8zqnhxjpjslx8r8cllfamy9dixki"; depends=[]; }; - RcppAPT = derive2 { name="RcppAPT"; version="0.0.6"; sha256="0gkvs276hwa4yzd1bwf12p83cq2i1k021nq4y6ll1gcrj41mkdns"; depends=[Rcpp]; }; + RcppAPT = derive2 { name="RcppAPT"; version="0.0.7"; sha256="00p4nciy6rv9plzk13sxfvdsr6m9ackjmg647pha9s8nbhlbdjf4"; depends=[Rcpp]; }; RcppAlgos = derive2 { name="RcppAlgos"; version="2.4.1"; sha256="0s97v2agy8pzaqfjm7cabpfxpkidxl1zwi4vkjdhsfzxjp5xwwms"; depends=[gmp Rcpp RcppThread]; }; RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.18"; sha256="0n68cf77gz34iq6w6ad87pbqwqam45nxp1gjzns4g6qhf7qdvrz4"; depends=[Rcpp]; }; - RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.10.1.2.0"; sha256="0nzi6plhdijx3khavmywzw9wbch0hj8kygphw35wdlslm4cnqcj1"; depends=[Rcpp]; }; + RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.10.4.0.0"; sha256="00nc7wfrra645mp7dl4j451m3pk3a0b3lrhgf8ydnw862avr9s6v"; depends=[Rcpp]; }; RcppBDT = derive2 { name="RcppBDT"; version="0.2.3"; sha256="0gnj4gz754l80df7w3d5qn7a57z9kq494n00wp6f7vr8aqgq8wi1"; depends=[BH Rcpp]; }; - RcppBigIntAlgos = derive2 { name="RcppBigIntAlgos"; version="1.0.0"; sha256="1mk3xy5dggvmilm6dnwxz4kj0k0hdza9wssn4838238xyd3mzv8x"; depends=[gmp Rcpp RcppThread]; }; + RcppBigIntAlgos = derive2 { name="RcppBigIntAlgos"; version="1.0.1"; sha256="157a14kqcf0q3z01mn4w1194k2l39dd4qmqs0i115p8bvkjc6ncd"; depends=[gmp Rcpp RcppThread]; }; RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.9"; sha256="1bnagfhx70xmzjddbaf1cpz4hmx3mhym4fg36hr9025yl7n4agvj"; depends=[Rcpp]; }; RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.10"; sha256="175bn75akwgz3vcp0n59kiqqz7q9cwkvih241nj8v810cp4gpmkp"; depends=[Rcpp]; }; - RcppCWB = derive2 { name="RcppCWB"; version="0.3.0"; sha256="1jzr7zgaq2gkqialscr9zh9imax37rdg1zshvj42cwf30za0fb8f"; depends=[Rcpp]; }; + RcppCWB = derive2 { name="RcppCWB"; version="0.3.2"; sha256="1ipbr729n4q0y5rdnrmj354w2wmrw2zz7zyfqnjvxh8ip507dham"; depends=[Rcpp]; }; RcppClassic = derive2 { name="RcppClassic"; version="0.9.12"; sha256="0v9v34i1c4dkplavdl14kz1k2rnk4hsaiyv6rkc9403z9isvzzr0"; depends=[Rcpp]; }; RcppClassicExamples = derive2 { name="RcppClassicExamples"; version="0.1.2"; sha256="0dr2104miy7psr73nicfs84652ai0d5liw6wxcwyrx7fmys3p638"; depends=[Rcpp RcppClassic]; }; RcppDE = derive2 { name="RcppDE"; version="0.1.6"; sha256="1i9jj595nqpb16y22z2b8fcf0gq1fg0pbiisbd837p1cyw4nff69"; depends=[Rcpp RcppArmadillo]; }; RcppDL = derive2 { name="RcppDL"; version="0.0.5"; sha256="1gii00bna6k9byaax7gsx42dv1jjnkrp4clbmdq59ybq3vkvw8z2"; depends=[Rcpp]; }; - RcppDate = derive2 { name="RcppDate"; version="0.0.1"; sha256="0psa7drm6chwn5w3h6yhaavf33mvzfaghzqa404l5yvxczy22xqi"; depends=[]; }; + RcppDate = derive2 { name="RcppDate"; version="0.0.2"; sha256="1c44kd0cq4q33qj970by7zqk3y1gdffpgf7xjiq9c540ya8yd56l"; depends=[]; }; RcppDist = derive2 { name="RcppDist"; version="0.1.1"; sha256="02g57xwfipdcljv06krhm02dbqn9kfyj2km6rdg0a7vq9prwdz1x"; depends=[Rcpp RcppArmadillo]; }; RcppDynProg = derive2 { name="RcppDynProg"; version="0.2.0"; sha256="10nc0sx3n83kg8rddbajifr9q8iyjmm59z5xcpqfmmfi345i26al"; depends=[Rcpp RcppArmadillo wrapr]; }; RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.9.1"; sha256="0qp9gypar280lm84pc8w0fxw4jgwqygwi3qnl5sl52kpkcj8c14a"; depends=[Matrix Rcpp]; }; RcppEigenAD = derive2 { name="RcppEigenAD"; version="1.0.0"; sha256="18zm9hsfqwiicxsdm87ix3qc261ljxxn2s736p6aayx82b6vwkz6"; depends=[BH functional memoise Rcpp RcppEigen Rdpack readr]; }; - RcppEnsmallen = derive2 { name="RcppEnsmallen"; version="0.2.15.0.1"; sha256="0x86hrii230v7lq424mdvf7py8frb9yvwhq5inwwj9snm1y438hp"; depends=[Rcpp RcppArmadillo]; }; + RcppEnsmallen = derive2 { name="RcppEnsmallen"; version="0.2.16.1.1"; sha256="14vi0wz9xr2swwh0ikvi1c2jbmj3ng7bgsycx6z9ym4dsnnrar7r"; depends=[Rcpp RcppArmadillo]; }; RcppExamples = derive2 { name="RcppExamples"; version="0.1.9"; sha256="0568zipgjxgmx086mlfpp5n7v8kf50gwrylvhl1bgvzb2vvr9dhj"; depends=[Rcpp]; }; RcppFaddeeva = derive2 { name="RcppFaddeeva"; version="0.1.0"; sha256="1rah18sdfmbcxy83i7vc9scrwyr34kn9xljkv9pa31js68gn2jrl"; depends=[knitr Rcpp]; }; + RcppFastFloat = derive2 { name="RcppFastFloat"; version="0.0.2"; sha256="1pzs6bzdnlvd3jr2p385jkppnhl82q56c4bp0m35qbpimw2ym2k1"; depends=[Rcpp]; }; RcppGSL = derive2 { name="RcppGSL"; version="0.3.8"; sha256="17nlayy6gvwb3v6l5aiqm84i75yf4dfi3zclxrgpqwf3j9v09yvz"; depends=[Rcpp]; }; RcppGetconf = derive2 { name="RcppGetconf"; version="0.0.3"; sha256="1qcnn482h9b8aw798frnkza4bzzpihp0pf4s1mj6zmn2ar01hsl0"; depends=[Rcpp]; }; RcppGreedySetCover = derive2 { name="RcppGreedySetCover"; version="0.1.0"; sha256="1v84i9gsmvpkmgd4niqnzp58nhrgn2j4rggsrnlh391ikdfrl51x"; depends=[BH data_table Rcpp]; }; @@ -4008,34 +4145,35 @@ in with self; { RcppMsgPack = derive2 { name="RcppMsgPack"; version="0.2.3"; sha256="0ffdw5ckkax8j87q0ykjhyp45l7gvxjppdi73kc4r5qxvijll2g3"; depends=[BH Rcpp]; }; RcppNLoptExample = derive2 { name="RcppNLoptExample"; version="0.0.1"; sha256="1fml6hpa12q0lgg5fg6fi9lz6mckwh345pbh95mld2qagzvmg01n"; depends=[nloptr Rcpp]; }; RcppNumerical = derive2 { name="RcppNumerical"; version="0.4-0"; sha256="1a92fql6mijhnr1kxkcxwivf95pk9lhgmhzkshs51h0ybfv5krik"; depends=[Rcpp RcppEigen]; }; - RcppParallel = derive2 { name="RcppParallel"; version="5.0.2"; sha256="10bg4fw38m64dhy543rwq2nnjjc9y24iggk343xslrb3ij8018lc"; depends=[]; }; + RcppParallel = derive2 { name="RcppParallel"; version="5.1.4"; sha256="10pa9vaz7p4m6hjca2cpy6vj7rvgly4zv0q1g2xfsmcchyk4bdbn"; depends=[]; }; RcppProgress = derive2 { name="RcppProgress"; version="0.4.2"; sha256="0j2b37gwjpgmrnr00srdzm751hzlpsjb54ph63xxmcdfnwhlnqmi"; depends=[]; }; RcppQuantuccia = derive2 { name="RcppQuantuccia"; version="0.0.3"; sha256="0cj95y8jcjm33d65y42f5ijw775kq3mh2p0659mp3i3r9fvaishk"; depends=[BH Rcpp]; }; RcppRedis = derive2 { name="RcppRedis"; version="0.1.10"; sha256="07cxp0xdrg1bydlvgryf8jivlqicd880xdfdz6grhqqdxwss8qv1"; depends=[BH RApiSerialize Rcpp]; }; RcppRoll = derive2 { name="RcppRoll"; version="0.3.0"; sha256="0srzfhzkk42kzrdjnhbb37946jp1p688rgysy6k3i2is8jb21zyb"; depends=[Rcpp]; }; - RcppSMC = derive2 { name="RcppSMC"; version="0.2.2"; sha256="1j9knzm71sszch2wzdr51s7ylmi5n1x540hs5z3ln3v8bz3rb0gn"; depends=[Rcpp RcppArmadillo]; }; - RcppSimdJson = derive2 { name="RcppSimdJson"; version="0.1.3"; sha256="1009mhpgbj06fs2zr0h9w6k7dzn49ss11ay6r8whq7alysfifz9b"; depends=[Rcpp]; }; - RcppSpdlog = derive2 { name="RcppSpdlog"; version="0.0.4"; sha256="02qq31xkn4i3s25670xmi72vbf56qymqnlsj2bba73q74nxxdxsv"; depends=[Rcpp]; }; + RcppSMC = derive2 { name="RcppSMC"; version="0.2.3"; sha256="1m6djcs20wn61vdc89s8bc0w5cq5q3cqc7kv1kzzy3qzwqdyg7w5"; depends=[Rcpp RcppArmadillo]; }; + RcppSimdJson = derive2 { name="RcppSimdJson"; version="0.1.5"; sha256="1r9dc6g1wa8mh170jx3aw9ak7gghkkmpy16i83aysflvf5ydrslp"; depends=[Rcpp]; }; + RcppSpdlog = derive2 { name="RcppSpdlog"; version="0.0.5"; sha256="05vmhnpl19fpnghmi871zd780c40j0cdns82i4613xhbilg8l81q"; depends=[Rcpp]; }; RcppStreams = derive2 { name="RcppStreams"; version="0.1.3"; sha256="06il7q3afaws57m0fxf04f2p5dvs23l1f7gl78pxwzclacdy3839"; depends=[BH Rcpp]; }; RcppTN = derive2 { name="RcppTN"; version="0.2-2"; sha256="0m2wc5n1fzxv56s4gqqnygb24dbadgrpgjm4bs4hr6qazgjapymf"; depends=[Rcpp]; }; RcppTOML = derive2 { name="RcppTOML"; version="0.1.7"; sha256="0h8517ipwqhqkhcfiyqmvsb585g01p0ra0azbpzyxip6pq6g029g"; depends=[Rcpp]; }; - RcppThread = derive2 { name="RcppThread"; version="0.5.4"; sha256="1mlzng6di30p4nfvq9l3z241vb8rwnpa2yjbafs2vzrl6v3zcfnf"; depends=[]; }; + RcppThread = derive2 { name="RcppThread"; version="1.0.0"; sha256="1xfcxrny779kgknlvnc4j02ifprnakndnkhx8bhy50d39vp4hjjl"; depends=[]; }; RcppUUID = derive2 { name="RcppUUID"; version="1.0.0"; sha256="0sx25z71bkjsf3ggljqkv1pji5kc32i3lkq28igiwixxfl2kj89b"; depends=[BH Rcpp]; }; RcppXPtrUtils = derive2 { name="RcppXPtrUtils"; version="0.1.1"; sha256="0jh64c46gp99d2nsih14vx34pamc8i7gkmiy2nj94rx3sxq62yh5"; depends=[Rcpp]; }; - RcppXsimd = derive2 { name="RcppXsimd"; version="7.1.4"; sha256="171281f8lbdnnv3q9x5c35ak8fkrymx7llnpv88dlh742z8nny1j"; depends=[Rcpp]; }; + RcppXsimd = derive2 { name="RcppXsimd"; version="7.1.6"; sha256="1iwiz4964dw015cbxcanks8xkjan39hfzf8x6bhvf6dqqwkc4bh7"; depends=[Rcpp]; }; RcppXts = derive2 { name="RcppXts"; version="0.0.4"; sha256="143rhz97qh8sbr6p2fqzxz4cgigwprbqrizxpkjxyhq8347g8p4i"; depends=[Rcpp xts]; }; RcppZiggurat = derive2 { name="RcppZiggurat"; version="0.1.6"; sha256="0wgd1v2p7zajnbrjf3hfi56p3pk3ld6iwkanbb04bjbnlif2ay4w"; depends=[Rcpp RcppGSL]; }; Rcrawler = derive2 { name="Rcrawler"; version="0.1.9-1"; sha256="1m6b1h72h8qjqcg3lzw6im6lpnkxhjg65g9fdjjqay6vy52ynznj"; depends=[callr data_table doParallel foreach httr jsonlite selectr webdriver xml2]; }; Rcriticor = derive2 { name="Rcriticor"; version="2.0"; sha256="1cnmmcdp2g3syrlld1pm7101cbzxh02cpvqvgsj7mp6zxm2k5plv"; depends=[]; }; Rcsdp = derive2 { name="Rcsdp"; version="0.1.57.1"; sha256="1dya0c0fcwr6ydcamz8m06nnq0b80vg7b22dg5jv3qi1n1fgp4lv"; depends=[]; }; Rcssplot = derive2 { name="Rcssplot"; version="1.0.0"; sha256="0hnzwjwk9zh4zbzy8sa0z6amikvpd9k1p1abd38khr8q8k1k8jiv"; depends=[]; }; - Rd2md = derive2 { name="Rd2md"; version="0.0.2"; sha256="07j1nnsk5nyl8kvgvh9f684g6bhc01jiq1fcmq2pnpx57jdzfbpi"; depends=[knitr]; }; + Rcurvep = derive2 { name="Rcurvep"; version="1.2.0"; sha256="1j067b98hcwm2ha0yrzbwjm54f4z5yqi04y9jkh9k2avpcpdbqxx"; depends=[boot dplyr ggplot2 magrittr purrr Rdpack rlang stringr tibble tidyr tidyselect]; }; + Rd2md = derive2 { name="Rd2md"; version="0.0.5"; sha256="1kqni87jg3avpcir1ls2kkf6qafkkdkcv51d9azsbqmji5168vlf"; depends=[knitr]; }; Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.11"; sha256="1sqzhfffap8i9nwclsj0q77sn6i0gzkn2hqfvw6k2w7j6aypyv4i"; depends=[formatR roxygen2 xfun]; }; Rdca = derive2 { name="Rdca"; version="0.1.0"; sha256="06s4n5xpla937q9f55xmsickvdiwiapxmwqvn6k0zsacisscaagl"; depends=[dplyr magrittr minpack_lm Rcpp RcppArmadillo Rdpack]; }; Rdice = derive2 { name="Rdice"; version="1.0.0"; sha256="1xibvm690808p2g3jch7rh1825yrpgln2hjfclgxjwn822qvs4xr"; depends=[data_table]; }; - Rdimtools = derive2 { name="Rdimtools"; version="1.0.4"; sha256="07vd0i659pwfvv3drwff07k1wir0m3lhsgihhc135pcpw28j94cz"; depends=[CVXR maotai mclustcomp Rcpp RcppArmadillo RcppDE RcppDist Rcsdp Rdpack RSpectra]; }; + Rdimtools = derive2 { name="Rdimtools"; version="1.0.6"; sha256="0icjpb5jyw1vrar2qcfmxg16v8nj5ghy6di69hdwv42h03xjzjsq"; depends=[CVXR maotai MASS mclustcomp RANN Rcpp RcppArmadillo RcppDE RcppDist Rcsdp Rdpack RSpectra]; }; Rdistance = derive2 { name="Rdistance"; version="2.1.3"; sha256="03wh6y9h5jgfc6xdncpgyz0v7lqavikp3pf5wwfmm2rqfj7yjr8c"; depends=[]; }; - Rdpack = derive2 { name="Rdpack"; version="2.1"; sha256="1kmz0kq2z1xl55w22paz98x9jpss06abvicmkslv4zq77kz99q16"; depends=[gbRd rbibutils]; }; + Rdpack = derive2 { name="Rdpack"; version="2.1.1"; sha256="11psw5yiamq0g7jc6fqn2wis565i60qgda4a5d09qi8fyzd6mnfb"; depends=[rbibutils]; }; Rdroolsjars = derive2 { name="Rdroolsjars"; version="1.0.1"; sha256="1l9bc1bwpj10irr973hzkhr04i1f3g998n8hcl2k2i9kgv1naqmz"; depends=[rJava]; }; Rdrw = derive2 { name="Rdrw"; version="1.0.2"; sha256="1487r8z6h1y0v6fxkp7qfbh7j96hw8gqbb0fc90m4cxwz0hrqrn2"; depends=[mvtnorm]; }; Rdsdp = derive2 { name="Rdsdp"; version="1.0.5"; sha256="04268fbajm7pgi5mxpghzw0yjwwx1dy9vdi6yhr20q2lmi6xh19w"; depends=[]; }; @@ -4051,17 +4189,19 @@ in with self; { RealVAMS = derive2 { name="RealVAMS"; version="0.4-3"; sha256="14jqrqza7bs11y1004wzi3bxkvkdfn43d82l0cyh6py8p37rfz28"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; Rearrangement = derive2 { name="Rearrangement"; version="2.1"; sha256="0q253nj62rl65vjsq6503r80qa2j35wac8lv7ydp9w260p28z923"; depends=[quantreg]; }; RecAssoRules = derive2 { name="RecAssoRules"; version="1.0"; sha256="0jvl9yl1rg69bqb1cimi8r0bry73jhsq73fxfyy33ljwym2cdgv6"; depends=[Rcpp]; }; + Recocrop = derive2 { name="Recocrop"; version="0.3-2"; sha256="1kcw0qkxwa58yk6iclbg5c0m3q2ylqwra24y9vxjpr2ajmsr5lf8"; depends=[meteor Rcpp terra]; }; Recon = derive2 { name="Recon"; version="0.3.0.0"; sha256="11gag2bl00pcy7ysfycaa58qarh6aigznldkc4kkn2178bl4ii62"; depends=[rootSolve]; }; RecordLinkage = derive2 { name="RecordLinkage"; version="0.4-12.1"; sha256="0l837hmcn1gwisn1y9q745grg1fyrdbx44jhj81475h2zdn8dbs4"; depends=[ada data_table DBI e1071 evd ff ipred nnet rpart RSQLite xtable]; }; - RecordTest = derive2 { name="RecordTest"; version="1.0.1"; sha256="1sxwnjkp6hvdfc6xfjldi9sbvy9wbzvw4x920ms3pfpvf7x7q930"; depends=[ggplot2]; }; + RecordTest = derive2 { name="RecordTest"; version="2.0.0"; sha256="1lq81zp94gkf45hp6idfcy6skc78mwqhaac6d013wnnv3fasf5bh"; depends=[ggplot2]; }; Records = derive2 { name="Records"; version="1.0"; sha256="08y1g2m6bdrvv4rpkhd5v2lh7vprxy9bcx9ahp1f7p062bn2lwji"; depends=[]; }; - RecurRisk = derive2 { name="RecurRisk"; version="1.0.2"; sha256="0ss1s0l8hycz90awfa5k4gxiql7ncqfn7vgipdnrxh0ly9s86j9m"; depends=[flexsurvcure SEER2R survival]; }; RedditExtractoR = derive2 { name="RedditExtractoR"; version="2.1.5"; sha256="1b6pp1vdn7jnyl8k828dgkxrx8sy2wyhkrn4rnfavqw4qvhm0mhm"; depends=[dplyr igraph magrittr RJSONIO rlang visNetwork]; }; + Rediscover = derive2 { name="Rediscover"; version="0.1.0"; sha256="16yjpgva314xdypg6bh4a8qwm7n2xf29jziqcmhg8dn9xhha3nh6"; depends=[data_table maftools Matrix PoissonBinomial RColorBrewer speedglm]; }; Redmonder = derive2 { name="Redmonder"; version="0.2.0"; sha256="02qrz1b0g7hdacj2s2bks5gfwnypkbiwlmn0bv7im1zz1swg9cp8"; depends=[]; }; RefFreeEWAS = derive2 { name="RefFreeEWAS"; version="2.2"; sha256="1aya34iz5v3xfpj86x9ab998m7fdwl138ly007mgdayacvqi4a6y"; depends=[quadprog]; }; RefManageR = derive2 { name="RefManageR"; version="1.3.0"; sha256="1spzdp5ni52dybcaxqnhwdphh27wjyrsfy4hsxsplpg9rqwfqfps"; depends=[httr jsonlite lubridate plyr stringr xml2]; }; RegClust = derive2 { name="RegClust"; version="1.0"; sha256="1d9w74phw4fgafglc18j7dpmln96fvxnf1kdc9zddgj90p8yfx63"; depends=[]; }; - RegSDC = derive2 { name="RegSDC"; version="0.4.0"; sha256="050b8m56qvbfm1mcbs9ns8mq7yzr645pkxm9238q11lxkx8lgahk"; depends=[MASS Matrix SSBtools]; }; + RegKink = derive2 { name="RegKink"; version="0.1.0"; sha256="1q7jpsh3al18i2dv67lmv5d6jgiy2px8jaxwkgg62njisk8c5qng"; depends=[MASS]; }; + RegSDC = derive2 { name="RegSDC"; version="0.5.0"; sha256="12x6bjzc8gd8sg7h1dymgm9iyaz33vf51fj23g59479yhczbnr26"; depends=[MASS Matrix SSBtools]; }; RegressionFactory = derive2 { name="RegressionFactory"; version="0.7.4"; sha256="0mhyjqp8x66zwnbxpwq3a8180z48rrm7hp50028grb2x19lp8qkd"; depends=[]; }; RegularizedSCA = derive2 { name="RegularizedSCA"; version="0.5.4"; sha256="1nw6hd9y2n1h3j1fqqkymz13xizv5xrsj93w702kkvkbwyl3yall"; depends=[colorspace ggplot2 gtools lattice mice psych RGCCA]; }; ReinforcementLearning = derive2 { name="ReinforcementLearning"; version="1.0.5"; sha256="0zk1hy4p5adyjm1430a8ad5acn9qaax1si8qqfxqayfmlj954sj9"; depends=[data_table ggplot2 hash]; }; @@ -4083,18 +4223,21 @@ in with self; { RepoGenerator = derive2 { name="RepoGenerator"; version="0.0.1"; sha256="0d6s2sqyycaqrg32xdkp3pr5i7qmvwrfrjcd7f94a9y3lz4bz5b5"; depends=[git2r httr rmarkdown rstudioapi]; }; Require = derive2 { name="Require"; version="0.0.10"; sha256="13bzas88862jbia0s2gdl6jssv9n9byc2hg2c9cj03b69nxw71r0"; depends=[data_table remotes]; }; ResearchAssociate = derive2 { name="ResearchAssociate"; version="1.0.1"; sha256="00j339ngc72gn2gyn1irjmazrv6l5nbsy3z25r6j1zrjwsbay15p"; depends=[ggplot2 plyr rentrez XML]; }; - ResidentialEnergyConsumption = derive2 { name="ResidentialEnergyConsumption"; version="1.0.1"; sha256="1dkk9hbgkc01i765dknzrfdpzpbc9k57vc4am0pj28hmlj32a0vg"; depends=[stringr]; }; + ResidentialEnergyConsumption = derive2 { name="ResidentialEnergyConsumption"; version="1.1.0"; sha256="0m24x5mha58ihsd06jkcb3wi796v3gkjg78w8vah21p9gqdmqxw1"; depends=[]; }; ResistorArray = derive2 { name="ResistorArray"; version="1.0-32"; sha256="0zqnl0bbqrj5hn5ywhlqyrlz5ryql88qahlgs9989v4rljcxxlam"; depends=[]; }; ResourceSelection = derive2 { name="ResourceSelection"; version="0.3-5"; sha256="1vg5fkjfwkganxf0ji70pkp071841hjgr5sjxlaky8mx7n0cy80x"; depends=[MASS Matrix pbapply]; }; - RestRserve = derive2 { name="RestRserve"; version="0.4.0"; sha256="07mm65yxzpwlg6x3lsggj41v8nl4m6v9mszhqjpgj19v3yxvwgi0"; depends=[checkmate jsonlite mime R6 Rcpp Rserve uuid]; }; + RespirAnalyzer = derive2 { name="RespirAnalyzer"; version="1.0.1"; sha256="0zdgbim5496fpfxi4cgn4fbl70grclii2naizaiabm4cz350hf6y"; depends=[pracma Rcpp signal]; }; + RestRserve = derive2 { name="RestRserve"; version="0.4.1"; sha256="1486hrzj5q5w4nbrsbqlv7vv20ly01y90qc2vygl5syzwvyjd422"; depends=[checkmate jsonlite mime R6 Rcpp Rserve uuid]; }; RevEcoR = derive2 { name="RevEcoR"; version="0.99.3"; sha256="1nym263ynjdir5kxv35jnmki9mshlplq0sk3xnjd4ac6f1cfbfqj"; depends=[gtools igraph magrittr Matrix plyr purrr stringr XML]; }; + ReviewR = derive2 { name="ReviewR"; version="2.3.6"; sha256="177gxnxpnbpc7hmaxc5qq1s8k1s4l29bf0bsi6plafy622ls321w"; depends=[bigrquery config dashboardthemes DBI dbplyr dplyr DT gargle glue golem httr jsonlite magrittr pkgload purrr redcapAPI REDCapR rlang RPostgres RSQLite shiny shinycssloaders shinydashboard shinydashboardPlus shinyjs shinyWidgets snakecase stringr tibble tidyr]; }; Rexperigen = derive2 { name="Rexperigen"; version="0.2.1"; sha256="158ksnd1gvzq7ii0ys2v0wrfnr001hni0i8m77p1fn1arixgmqdw"; depends=[digest jsonlite RCurl]; }; RfEmpImp = derive2 { name="RfEmpImp"; version="2.1.5"; sha256="1bvjk71rfhpbj2j7raibsb0y3skbv1qba7yl2g00npnkk2zk14xj"; depends=[mice ranger]; }; Rfacebook = derive2 { name="Rfacebook"; version="0.6.15"; sha256="0hp2mbm0hnyasizszvh5x9hv7z2q633zck1a1gvk36nbxb1shx7c"; depends=[httpuv httr rjson]; }; Rfast = derive2 { name="Rfast"; version="2.0.1"; sha256="1cq3mcg49hsvqhwn6f4dgsx7f8ma4qnwr5n6s7m22qy57rg31958"; depends=[Rcpp RcppArmadillo RcppZiggurat]; }; - Rfast2 = derive2 { name="Rfast2"; version="0.0.8"; sha256="03ql7vlslz3l6s0vx8cifkk2kbh9fxav39mb8vwi9j7b4whbs988"; depends=[RANN Rcpp RcppArmadillo Rfast]; }; + Rfast2 = derive2 { name="Rfast2"; version="0.0.9"; sha256="1mkncazxcd1rx1vkp6r4s2gbvhgmfbcz6paq2x2yrj7k1yvpx5cr"; depends=[RANN Rcpp RcppArmadillo Rfast]; }; Rfit = derive2 { name="Rfit"; version="0.24.2"; sha256="1b3pza2xdpifvrcqbdp5r2wy82ws1844bnpna01hqj65xbw2iix8"; depends=[]; }; Rfolding = derive2 { name="Rfolding"; version="1.0"; sha256="15lf73zxr1slin9faj9k0z8qkb1g9nb7h080nfv99gsi2ks68ssg"; depends=[]; }; + Rforestry = derive2 { name="Rforestry"; version="0.9.0.4"; sha256="0jf84nxjsyblraiz2kz2ay2rs1q4hwyf00039i655smfmfk0nz07"; depends=[glmnet onehot Rcpp RcppArmadillo RcppThread visNetwork]; }; Rfractran = derive2 { name="Rfractran"; version="1.0"; sha256="0cwc069f7rhkxkr5kn0n43mdy8m47gh0q6d5ijwzkhncrijb10cy"; depends=[gmp]; }; Rfssa = derive2 { name="Rfssa"; version="1.0.0"; sha256="0rmlx1fia0758kbqpi56awh7xws5pwx6zl8nnggi6bqalyskf09n"; depends=[dplyr fda lattice markdown plotly Rcpp RcppArmadillo Rssa shiny]; }; Rga4gh = derive2 { name="Rga4gh"; version="0.1.1"; sha256="0h5y722blkkwn6ask6vjnhl22v9l6511chdm50ig6xcs5dvjam2m"; depends=[httr jsonlite]; }; @@ -4109,13 +4252,12 @@ in with self; { Ridit = derive2 { name="Ridit"; version="1.1"; sha256="02cni6hzf1bsns7vi8vklnhc0pfb5vwqhjnnfnjnnaxpzpsbvdfn"; depends=[]; }; RiemBase = derive2 { name="RiemBase"; version="0.2.4"; sha256="1h3ascbdgvp56k5ki6qr849296cdkr2bzc33pwwp033rmd8khpr3"; depends=[pracma Rcpp RcppArmadillo Rdpack]; }; Riemann = derive2 { name="Riemann"; version="0.1.0"; sha256="17k7qs0sppr7qwfjkn5v7pv60jzq1p32smd686w36mycd5ir9lp8"; depends=[maotai Rcpp RcppArmadillo Rdpack RiemBase]; }; - Riex = derive2 { name="Riex"; version="1.0.1"; sha256="1jri01s08g819bvw0bgd5z5iaf9rlikkqq993lm0455k909wm34v"; depends=[dplyr ggplot2 httr purrr quantmod rjson stringr tibble tidyr tidyverse TTR urltools xts zoo]; }; - Rilostat = derive2 { name="Rilostat"; version="1.1"; sha256="0a4bnp0a78a4yflxc535h0pajr4xaclfagx2f527p5ch5k23z2l6"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; }; - Rinstapkg = derive2 { name="Rinstapkg"; version="0.1.0"; sha256="0fvj4jc00g5b8cc4mrsjj72fdcdmvlky05s2ca0g2gndrjs6vxic"; depends=[digest dplyr httr jsonlite lubridate purrr readr rlang uuid]; }; + Riex = derive2 { name="Riex"; version="1.0.2"; sha256="03627dik6dd9d2kwv757zanh0i4invmcwg162m9ayhv41ygj5z1l"; depends=[dplyr ggplot2 httr purrr quantmod rjson stringr tibble tidyr TTR urltools xts zoo]; }; + Rilostat = derive2 { name="Rilostat"; version="1.1.7"; sha256="10m7vr9qcn7la01a2p67bcq5dy4gh3wl3yd6j2v3l1yd332n07ag"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; }; Rip46 = derive2 { name="Rip46"; version="1.0.2"; sha256="0wfp6fm5mgmjqjkn0c5hvjd95yn4zcv0s8xc5294qf5jqxp8b1w7"; depends=[Rcpp]; }; Rirt = derive2 { name="Rirt"; version="0.0.2"; sha256="0npd2g3a4dh5hlj6l06k1pf0j4731ybqqd4mpi4id16nf81cg104"; depends=[ggplot2 Rcpp reshape2]; }; Risk = derive2 { name="Risk"; version="1.0"; sha256="1i42xcc699syj108mvgklwb30wkf9c9jrg5rmd2ypnqk9mnyg2fg"; depends=[]; }; - RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.4"; sha256="1f5789sa2qjjsfsjxi1cidmpdla010zwvwspl46vzr97196hhig7"; depends=[MASS nloptr quadprog]; }; + RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.5"; sha256="1yd9dxgalk52xisi4lq35zdvyfi4nrfw98flc68jam3jlk0bi9rs"; depends=[MASS nloptr quadprog]; }; Ritc = derive2 { name="Ritc"; version="1.0.2"; sha256="03smhxjhjfkc9pxhlgg54b6v2jznpmnws8373qpvn9a9ky5bcq2l"; depends=[minpack_lm]; }; RiverBuilder = derive2 { name="RiverBuilder"; version="0.1.1"; sha256="06cd1m4liv2bsh2sxplq2zl45g9zq8gsgvh14d0zr0pqm8z4dsyw"; depends=[]; }; RiverLoad = derive2 { name="RiverLoad"; version="1.0.2"; sha256="0v689r9k52x8d4pvk6jlsgr6lp22fn3kn7s69hryyy3pmfmlbrh9"; depends=[imputeTS]; }; @@ -4123,7 +4265,7 @@ in with self; { RkMetrics = derive2 { name="RkMetrics"; version="1.3"; sha256="1k6vnr1r4h69iznib638z45gd0f8wc4g4h0ji9f0017883g77li1"; depends=[]; }; Rknots = derive2 { name="Rknots"; version="1.3.2"; sha256="1krhma8hy3l5lbm6d8rxjlj9jw1zrd16h4wy4p1clfa5vlhh3bwi"; depends=[bio3d rgl rSymPy]; }; Rlab = derive2 { name="Rlab"; version="2.15.1"; sha256="1pb0pj84i1s4ckdmcglqxa8brhjha4y4rfm9x0na15n7d9lzi9ag"; depends=[]; }; - Rlabkey = derive2 { name="Rlabkey"; version="2.5.5"; sha256="0jm9dz0w0drl751j2vmanhgy6d7xaiydynwy0aq9pap9jg1hbq09"; depends=[httr jsonlite Rcpp]; }; + Rlabkey = derive2 { name="Rlabkey"; version="2.6.0"; sha256="1lznn72a203k5ik7pz7736ifpns10qqmnhdz7z62rnxg79fi2aik"; depends=[httr jsonlite Rcpp]; }; Rlda = derive2 { name="Rlda"; version="0.2.6"; sha256="0i8n01h9072q339p1kiqhcpwphw0d2x6bsszbhgfqc2b160dk2bl"; depends=[coda doParallel foreach gtools Rcpp RcppArmadillo RcppProgress]; }; Rlgt = derive2 { name="Rlgt"; version="0.1-3"; sha256="0g610v5rch5s31gc7dy9zx4mcgsdhn82y1pmr2rs14qma0v7x515"; depends=[BH forecast Rcpp RcppEigen rstan rstantools sn StanHeaders]; }; Rlibeemd = derive2 { name="Rlibeemd"; version="1.4.1"; sha256="06bb939awawpwn4g63b9jzq5b658lsznzy272zl0fy19x62c6bwr"; depends=[Rcpp]; }; @@ -4139,19 +4281,19 @@ in with self; { Rmixmod = derive2 { name="Rmixmod"; version="2.1.5"; sha256="0cl0bl7554abjwz2as8gqvrzqswlw5727dac5302p7ksy3id9a1j"; depends=[Rcpp RcppEigen]; }; RmixmodCombi = derive2 { name="RmixmodCombi"; version="1.0"; sha256="0cwcyclq143938wby0aj265xyib6gbca1br3x09ijliaj3pjgdqi"; depends=[Rcpp Rmixmod]; }; Rmosek = derive2 { name="Rmosek"; version="1.3.5"; sha256="18q39n2p3gms9zqrl8g15rjjk4v64365v0rm8r7zvvivh1hy5xa0"; depends=[]; }; - Rmpfr = derive2 { name="Rmpfr"; version="0.8-2"; sha256="007pc7fpzl2mcg3qxa2vfjip6m2dr314qjsnybkj3kdj70bszxkl"; depends=[gmp]; }; - Rmpi = derive2 { name="Rmpi"; version="0.6-9"; sha256="1rhycla98hxgnnxlxxldr1x51djak7c2jjvlrv3jcsvgwp1ymqdj"; depends=[]; }; + Rmpfr = derive2 { name="Rmpfr"; version="0.8-4"; sha256="0xaqbgkpnjg53zcp56c59cz5dh3jvvwqnzvyxqzy77c6yvkwy3hx"; depends=[gmp]; }; + Rmpi = derive2 { name="Rmpi"; version="0.6-9.1"; sha256="1j8akqjan59yzwx2s1zxc214qyd323fd2i2dhgq0n11mb6ajmq4r"; depends=[]; }; Rmst = derive2 { name="Rmst"; version="0.0.3"; sha256="1fykpii17k460qlsjhhh5vag02lhkyk5l3zjmg8hifqp0cjhz2fl"; depends=[ggplot2 Rata reshape2 Rirt]; }; RnavGraphImageData = derive2 { name="RnavGraphImageData"; version="0.0.4"; sha256="1k1gnkghap878fck0bbz9mm0fr4cli6lh1d11r0cf47fvl6cc4gr"; depends=[]; }; Rnightly = derive2 { name="Rnightly"; version="0.1.0"; sha256="08sb4ic7my8b6xcjn9vim8wp4z3kvk0gyp604dg1az7czc7ics5r"; depends=[glue htmltools]; }; Rnmr1D = derive2 { name="Rnmr1D"; version="1.2.5"; sha256="0z97pmkksma225s948r0myd4638cy8vl1x2244w1r6n0cybymnd9"; depends=[base64enc doParallel foreach ggplot2 igraph impute MASS MassSpecWavelet Matrix plotly plyr ptw Rcpp signal speaq XML]; }; - Rnumerai = derive2 { name="Rnumerai"; version="2.1"; sha256="1f16fp9gzcaz3ad7iyw10n8jrnmnhxygn00mrcg582jz62dih9bd"; depends=[dplyr ggplot2 httr lubridate purrr tidyr]; }; - RoBMA = derive2 { name="RoBMA"; version="1.1.2"; sha256="0f2fjj9hz71gacsimv9gmg8hw72k8r7lmlrbhlhbws642wjs5lwj"; depends=[BH bridgesampling callr coda DPQ extraDistr psych Rdpack rjags runjags scales]; }; + Rnumerai = derive2 { name="Rnumerai"; version="2.1.1"; sha256="09g7zg6f5aw6yy8lpmfx7dxdv3rimczrjwk5348p7gqhgxsy11f5"; depends=[dplyr ggplot2 httr lubridate purrr tidyr]; }; + RoBMA = derive2 { name="RoBMA"; version="1.2.1"; sha256="0cfkdk97d19ga5ml82hchll7hqd60d6sj583w0nb90bsq3pfidhc"; depends=[BH bridgesampling callr coda DPQ extraDistr psych Rdpack rjags runjags scales]; }; RobAStBase = derive2 { name="RobAStBase"; version="1.2.1"; sha256="0dn93bcyz9kxbj38sc1wisfa6v0666v9gk6y3zq0ihjkkhkmdwq3"; depends=[distr distrEx distrMod RandVar rrcov startupmsg]; }; RobAStRDA = derive2 { name="RobAStRDA"; version="1.2.0"; sha256="1s84j5in4av9zbbszv8j2rpigrd9ws9h4hz64jw7xagsj3xb49kz"; depends=[]; }; RobExtremes = derive2 { name="RobExtremes"; version="1.2.0"; sha256="150p94f0g75g54qcaq4x45lk4sxiyvv1zs4hxkicf46raybvsv89"; depends=[actuar distr distrEx distrMod evd RandVar RobAStBase RobAStRDA robustbase ROptEst startupmsg]; }; RobGARCHBoot = derive2 { name="RobGARCHBoot"; version="1.2.0"; sha256="142r6cmzwhg4xfbpbgrvngncm2wczly2arg6p8612ypjsk4yinrf"; depends=[doParallel doRNG foreach Rcpp RcppArmadillo]; }; - RobKF = derive2 { name="RobKF"; version="1.0.0"; sha256="05afy56zxl5908z2gqrwsqm19m49q85bz634rmfipb3zmv1pci79"; depends=[ggplot2 Matrix Rcpp RcppEigen Rdpack reshape2]; }; + RobKF = derive2 { name="RobKF"; version="1.0.1"; sha256="0av2wdcsfp92dbfk5q0hph0vvk7z567vhv8ck6zrhifc3j0k119a"; depends=[ggplot2 Matrix Rcpp RcppEigen Rdpack reshape2]; }; RobLox = derive2 { name="RobLox"; version="1.2.0"; sha256="1lcylkskfidg576lqfi84l14rvrpfbzmr53hcgzzmfipxhli4dr8"; depends=[Biobase distr distrMod lattice RandVar RColorBrewer RobAStBase]; }; RobLoxBioC = derive2 { name="RobLoxBioC"; version="1.2.0"; sha256="01lydp67v7mc4v3svsnl4zqq2jy1czwg9l9blngjn9ky0hv3haf5"; depends=[affy AnnotationDbi beadarray Biobase BiocGenerics distr distrMod lattice RColorBrewer RobLox]; }; RobMixReg = derive2 { name="RobMixReg"; version="1.1.0"; sha256="13w6zvncwh561wzzqy548x0w25rnzf0pfvi5cc6mzn71x5l7cmh2"; depends=[dplyr flexmix glmnet gplots gtools lars MASS RColorBrewer rlang robust robustbase scales]; }; @@ -4159,17 +4301,17 @@ in with self; { RobRSVD = derive2 { name="RobRSVD"; version="1.0"; sha256="07z5fw8j5lq7nyxgkvb9i4iwb5inddz2ib4m2bjx6q4c1ricpqz9"; depends=[]; }; RobRex = derive2 { name="RobRex"; version="1.2.0"; sha256="1npgbdvdzb0p0w77fsngrwg968y621p3lx8qw69ns8qgxjkismqp"; depends=[distr RandVar RobAStBase ROptRegTS]; }; RobStatTM = derive2 { name="RobStatTM"; version="1.0.2"; sha256="14fnz01n0dd0qdlnd9vcqqj0xzfn8av8fvsy2ay0lk22ma3jw83v"; depends=[DEoptimR DT fit_models ggplot2 gridExtra PerformanceAnalytics pyinit robustbase rrcov shiny shinyjs xts]; }; - RobinHood = derive2 { name="RobinHood"; version="1.4"; sha256="02dlq6bmd5466kd7pjvkmsa5931gi0bcjda8ckbpdzqfv6bmbd0c"; depends=[dplyr httr jsonlite lubridate magrittr profvis uuid]; }; + RobinHood = derive2 { name="RobinHood"; version="1.6"; sha256="1513z92kk7p1d25zlm597yfswdx4x2w880366cs06j7nfg32izir"; depends=[dplyr httr jsonlite lubridate magrittr profvis uuid]; }; Robocoap = derive2 { name="Robocoap"; version="0.1-1"; sha256="0aj6iv85a1zfaknjhrzf6lnf0qn726dvnj4dywg9nii1kkqrkq2w"; depends=[data_table igraph markovchain tm]; }; RobustAFT = derive2 { name="RobustAFT"; version="1.4-5"; sha256="1i119qqlavfj7k0srb8fbbyy2nhsjv9rgrni854liizr9m51cgac"; depends=[robustbase survival]; }; - RobustBayesianCopas = derive2 { name="RobustBayesianCopas"; version="1.0"; sha256="1l6rp3b65927nx2z2xqk6rf1k75fbnflapdjvkq81i9bhwl5q1i5"; depends=[rjags statip]; }; + RobustBayesianCopas = derive2 { name="RobustBayesianCopas"; version="2.0"; sha256="0cbibfp4y45cc1disp2r37v0jln0cd9gy3d77z3k9ybj1gg8wa88"; depends=[rjags statip]; }; RobustCalibration = derive2 { name="RobustCalibration"; version="0.5.1"; sha256="0wsnvryvrl37acljrda2dm1d8aynqiy66yd2i857m035whixfpqa"; depends=[Rcpp RcppEigen RobustGaSP]; }; RobustGaSP = derive2 { name="RobustGaSP"; version="0.6.1"; sha256="0bcrgrxlwysk8gg2ln17h4jm78iqlx1d46q0dnm0pxknqihi9jwf"; depends=[nloptr Rcpp RcppEigen]; }; RobustLinearReg = derive2 { name="RobustLinearReg"; version="1.2.0"; sha256="06137f516gyj64qdmwby7m1xnvj4hxzpqj454jn0xcinvl89380w"; depends=[]; }; RobustRankAggreg = derive2 { name="RobustRankAggreg"; version="1.1"; sha256="1pslqyr1lji1zvcrwyax4zg2s81p1jnhfldz8mdfhsp5y7v8iar3"; depends=[]; }; RockFab = derive2 { name="RockFab"; version="1.2"; sha256="1b5mhfll5vmqwl4pblmclyx9604vn07jyza02rm0jcsx915ms8sc"; depends=[EBImage rgl]; }; Rodam = derive2 { name="Rodam"; version="0.1.6"; sha256="1204zj556xciw29bn2dzndv7dfmmvdhyj5r5slgfzhsxyx0ca4i2"; depends=[RCurl]; }; - RolWinMulCor = derive2 { name="RolWinMulCor"; version="1.0.0"; sha256="0pmdmw8d6rqcagvwr8l13bm9fkvw414y9rvcz4cvwpvy9sfj0kaw"; depends=[colorspace gtools pracma scales zoo]; }; + RolWinMulCor = derive2 { name="RolWinMulCor"; version="1.2.0"; sha256="0vfsgp0qvv6pnpai8nyy0xzzlzyjwx98xrhlwlks9dbm84wg8vqr"; depends=[colorspace gtools pracma scales zoo]; }; RonFHIR = derive2 { name="RonFHIR"; version="0.4.0"; sha256="1ajpgpp300m0zzqzzwsn8sfy8x751hrr8py9n9xvzjmkgyrh4hhw"; depends=[httr jsonlite R6 stringr]; }; Rook = derive2 { name="Rook"; version="1.1-1"; sha256="00s9a0kr9rwxvlq433daxjk4ji8m0w60hjdprf502msw9kxfrx00"; depends=[brew]; }; RootsExtremaInflections = derive2 { name="RootsExtremaInflections"; version="1.2.1"; sha256="0qd6cmzp8fkb75ac79xbh4032vqwax7nk7d6yykpdbn0bnk2kvdi"; depends=[doParallel foreach inflection iterators]; }; @@ -4183,34 +4325,36 @@ in with self; { Rpdb = derive2 { name="Rpdb"; version="2.3"; sha256="0zy5f7bli6ppc9giwf8845mzjcv54r2sqb8hxwgbn9k6rjlszgi8"; depends=[rgl]; }; RpeakChrom = derive2 { name="RpeakChrom"; version="1.1.0"; sha256="1r8f6knpz83arz2kabizx5yyh1myg0h310qlwh8rmy88cdxi1ps9"; depends=[ggplot2 minpack_lm pracma ptw]; }; Rphylip = derive2 { name="Rphylip"; version="0.1-23"; sha256="0kpqmik4bhr74ib8yvaavr10z4v4w3li5vibdhz7lvz35jfirg9r"; depends=[ape]; }; - Rphylopars = derive2 { name="Rphylopars"; version="0.3.0"; sha256="0s7rlkqfjz46yz2lyyxhdla0xl3maxjyp168anizn84qzcgchmxz"; depends=[ape doBy geiger MASS Matrix phylolm phytools Rcpp RcppArmadillo]; }; + Rphylopars = derive2 { name="Rphylopars"; version="0.3.2"; sha256="1cpq8581lk2bzz59r4kwdpg6yc9a2qidnrz3wnky2y2z11gyy47v"; depends=[ape doBy geiger MASS Matrix phylolm phytools Rcpp RcppArmadillo]; }; Rpoet = derive2 { name="Rpoet"; version="1.1.0"; sha256="11gp4zg0wc2a21956355rkr3i3dyaabfz0z30z4phn8s7y3yqr92"; depends=[]; }; Rpolyhedra = derive2 { name="Rpolyhedra"; version="0.4.2"; sha256="0q50f0pp72rwmflxwnridjrcl649kz5h2fm8jfz2pn473mghhya8"; depends=[digest dplyr futile_logger geometry git2r R6 rgl stringr testthat XML]; }; Rpoppler = derive2 { name="Rpoppler"; version="0.1-0"; sha256="19nvv45ahp0c241p1xzlq0sq5qarqg66jw5f1anhqnfi2hi91hcm"; depends=[]; }; Rprofet = derive2 { name="Rprofet"; version="2.2.1"; sha256="150123vxdd31p96f3vsri46ryfng2xvnjgm6mdiqczg48xyfpbdp"; depends=[binr ClustOfVar ggplot2 gridExtra plyr sqldf stringr]; }; Rpvt = derive2 { name="Rpvt"; version="0.1.1"; sha256="0ggd6ikp2s9z4086y8w3qzb9jcyyqpby41p3ayjwam94skh154mf"; depends=[Rcpp RcppArmadillo Rdpack]; }; Rquake = derive2 { name="Rquake"; version="2.4-4"; sha256="1929qxqbb6s316zb9x2q1kwz2pvwpvqr1w6iw8vm5vijyf1nvv30"; depends=[GEOmap MBA minpack_lm RPMG RSEIS]; }; - Rquefts = derive2 { name="Rquefts"; version="1.0-7"; sha256="1r1b2ga7kfhxsgr2d6ncfyrcpwx1jy0q1h06xajhfpd7i2sk7i84"; depends=[meteor Rcpp]; }; + Rquefts = derive2 { name="Rquefts"; version="1.2-1"; sha256="1v548wys8fd6xqz4hfvqkckl6szjf6zr383n1x0kc6f2pfrc6jnf"; depends=[meteor Rcpp]; }; Rramas = derive2 { name="Rramas"; version="0.1-6"; sha256="16aapvz9j81lvi5ryj41bvn3wf51b0gynnzs0jpvva4m3mvzw6an"; depends=[diagram]; }; - Rraven = derive2 { name="Rraven"; version="1.0.10"; sha256="1b0av1pwg6n6rbl5k6md8knjqamismd8wbx7hnlkmak8q1yzk282"; depends=[NatureSounds pbapply seewave tuneR warbleR]; }; + Rraven = derive2 { name="Rraven"; version="1.0.13"; sha256="0nlqr1hzbzbz4rb3hjy01iw8czhaqvwmy9hh728fgl5vajwqwn8g"; depends=[NatureSounds pbapply seewave tuneR warbleR]; }; Rrdrand = derive2 { name="Rrdrand"; version="0.1-16"; sha256="0j9yyvq8r1cgwj3kw1ak6hyazr67f2q0c1m651wdm0wcvm1ajx7f"; depends=[]; }; Rrelperm = derive2 { name="Rrelperm"; version="0.1.0"; sha256="0cjw91j1sgc27wbx1dcdqk8j4hjkamp3wav78sh4ncdlvkyyz4p0"; depends=[nleqslv Rcpp RcppArmadillo Rdpack]; }; - Rsagacmd = derive2 { name="Rsagacmd"; version="0.0.9"; sha256="19kpdq7x70fs4xd09lslpwclwmclc189hl8lpcycf80q74cm2r55"; depends=[foreign magrittr minpack_lm raster rgdal rlang sf stringr tibble XML]; }; + RsSimulx = derive2 { name="RsSimulx"; version="1.0.1"; sha256="0fg19mmgcqz39mxhnxlsd1l1qmkjrvbc3149hrib0mayy1b1fqw4"; depends=[ggplot2 gridExtra]; }; + Rsagacmd = derive2 { name="Rsagacmd"; version="0.1.0"; sha256="0igbshgqd6dgp01zfb7czwap49wlb10p8qsn0p82shd6k5ad9g1l"; depends=[foreign magrittr processx raster rgdal rlang sf stringr tibble XML]; }; Rsampling = derive2 { name="Rsampling"; version="0.1.1"; sha256="14rp3j7iaii4rc3jkbijmbgvlagxxqjkz3vvfwwpxix43rsi8zsk"; depends=[]; }; Rsconctdply = derive2 { name="Rsconctdply"; version="0.1.3"; sha256="12xc1laxgivv4szp8341pvhmxnzzzzc2s4jhnqsqrbx71lbd9szg"; depends=[dplyr rjson rsconnect]; }; Rserve = derive2 { name="Rserve"; version="1.7-3.1"; sha256="16cg0cak9pvd9l35fjy1lsplxr5ncvb4apzg5mish5kff0cyk89v"; depends=[]; }; RsimMosaic = derive2 { name="RsimMosaic"; version="1.0.3"; sha256="0jlzrs9xxlpazvq3iw8znk0bd00bzlry7bgxsxq7xl23akizj0ji"; depends=[fields jpeg RANN]; }; - Rsmlx = derive2 { name="Rsmlx"; version="2.0.2"; sha256="1r0z3k6ib7nkbi0v2h07srdpqkpnhhg3si82nnb8x7j23da7hxbs"; depends=[ggplot2 gridExtra MASS]; }; + Rsmlx = derive2 { name="Rsmlx"; version="3.0.0"; sha256="04d47l8s8hi8gyca4j60zj35wpvr4mml282w586c8x24g62jznvk"; depends=[ggplot2 gridExtra MASS]; }; Rsolnp = derive2 { name="Rsolnp"; version="1.16"; sha256="0w7nkj6igr0gi7r7jg950lsx7dj6aipgxi6vbjsf5f5yc9h7fhii"; depends=[truncnorm]; }; Rspc = derive2 { name="Rspc"; version="1.2.2"; sha256="1cnzqpnh009wfs51dc4id9q3giaa8b6dc75b1lhzpwcvw0cxcy4y"; depends=[]; }; Rspotify = derive2 { name="Rspotify"; version="0.1.2"; sha256="1q8ajjx5ghlgxgch9gifvhi2gmsi0ph8pygwrb9jrd3ijahlw5k4"; depends=[dplyr httr jsonlite magrittr plyr]; }; RsqMed = derive2 { name="RsqMed"; version="0.1.7.1"; sha256="18r78svwbnri5283s5nxg4vrp29r6xx13h0n6w634jdpwaiw56gk"; depends=[GMMAT SIS]; }; Rssa = derive2 { name="Rssa"; version="1.0.3"; sha256="1sjl60djgpn4wkgpw1kbm0c376gk1g507dw4bnaqn518qhi8mp6k"; depends=[forecast lattice svd]; }; - RstoxData = derive2 { name="RstoxData"; version="1.0.17"; sha256="1dfmbfpjqj8p5m7dybjx6h5vapb5xzr4l2sa24z9wjdfxrzf07x9"; depends=[data_table Rcpp readr xml2]; }; + RstoxData = derive2 { name="RstoxData"; version="1.1.1"; sha256="1arb37h50jcnvs74pn13w5rbmrs6wmyhchm69vjm9knglb0dyz6q"; depends=[data_table Rcpp xml2]; }; Rsurrogate = derive2 { name="Rsurrogate"; version="2.0"; sha256="1pjyhlxqi8mcbywa7qa1vxgxr5jca0nc9vm1bx53vr231wgnb7gf"; depends=[survival]; }; - Rsymphony = derive2 { name="Rsymphony"; version="0.1-29"; sha256="09ilz815phgjm87ah879dsx008scdp51x7h3jn2j48zgzym59sfb"; depends=[]; }; + Rsymphony = derive2 { name="Rsymphony"; version="0.1-31"; sha256="1acvxh2y9gvcv9cz13ahvsz89w39h35hmjxj2vf0ik3finbi50r8"; depends=[]; }; RtD3 = derive2 { name="RtD3"; version="0.0.1"; sha256="0zbm9pf1z8xl99aj64xy8q3hly98c2rzy34fzkbjyndysvxf9032"; depends=[data_table geojsonsf htmlwidgets jsonlite purrr]; }; Rtauchen = derive2 { name="Rtauchen"; version="1.0"; sha256="09282k6qsjxgm26682npfjymmbx5g8flcc44awmkjl2k4fa1q9ha"; depends=[]; }; + Rthingsboard = derive2 { name="Rthingsboard"; version="0.2.4"; sha256="0577fb7f1dm5a3xz6q9gmg97i2080hv2qpq944wilfmfzz0xa4h1"; depends=[dplyr httr logger]; }; Rtnmin = derive2 { name="Rtnmin"; version="2016-7.7"; sha256="0f8ii87v29v61b93hx2yxdppp3nvgnl5imp80sbb4bjsdg0mf989"; depends=[]; }; Rtrack = derive2 { name="Rtrack"; version="1.0.0"; sha256="01xgbz37rsbjkix9nlx64qyimsbbgsmyswcv4jbpqasvkp6d480q"; depends=[crayon Hmisc KernSmooth openxlsx pbapply randomForest raster readxl rgeos rjson sp]; }; Rtsne = derive2 { name="Rtsne"; version="0.15"; sha256="0v17vxizrs1msay24xl2bckfajr2c82wpqj07lyssbrq197nwdsn"; depends=[Rcpp]; }; @@ -4219,15 +4363,17 @@ in with self; { Rtwalk = derive2 { name="Rtwalk"; version="1.8.0"; sha256="0zxf66lsfq8by40flv34xzd5yy0wa1ah9li1d0h7f0yh9nbwhxl5"; depends=[]; }; Runiversal = derive2 { name="Runiversal"; version="1.0.2"; sha256="0667mspsjydmxi848c6wsf14gz72bmdj9b3lilma92b7fhqnv7ai"; depends=[]; }; Runuran = derive2 { name="Runuran"; version="0.33"; sha256="11bn2ifynh0sh8j3aam6x3wb791cbbskdxmn5hicl59jsnr6dm6m"; depends=[]; }; - Rvcg = derive2 { name="Rvcg"; version="0.19.1"; sha256="0brqnvhqj9052kkic1i8mxx7y1si9na5rwj1fmslsf5mih8n4grr"; depends=[Rcpp RcppArmadillo RcppEigen]; }; - Rvmmin = derive2 { name="Rvmmin"; version="2018-4.17"; sha256="0mhzzwk311wa157l3n4x5x038asvjd81l45g1jclfsjr0smsffym"; depends=[optextras]; }; + Rvcg = derive2 { name="Rvcg"; version="0.19.2"; sha256="1bl8ld2hqwgi7q8zf4g637jb3h3cnls4nmx0av27s3ggngpmv4ra"; depends=[Rcpp RcppArmadillo RcppEigen]; }; + Rvmmin = derive2 { name="Rvmmin"; version="2018-4.17.1"; sha256="0kl1h4mlvb1bngb40r3dhrjkpnh3lsqddis65hbjzm2pzz20l02m"; depends=[optextras]; }; Rvoterdistance = derive2 { name="Rvoterdistance"; version="1.1"; sha256="16il36hkq1j6gyl5d8bx5khiiv6fy2m8vkhwiaaiqsliw2sspy4j"; depends=[Rcpp]; }; Rwave = derive2 { name="Rwave"; version="2.4-8"; sha256="1rmqwyj2r84sii0vfqhyhpi3n1n1zia2ca627fq9ksvwn110nrvh"; depends=[]; }; Rwhois = derive2 { name="Rwhois"; version="1.0.4"; sha256="0gbw1fvin6hwm4893rif9grpsf5s2snzp7zvz3ra4f5jv5bflvpl"; depends=[stringr]; }; Rwinsteps = derive2 { name="Rwinsteps"; version="1.0-1.1"; sha256="0kaxhaa65k1hkhl4kqfxyyk6v967xncrdr5hy8b808zlbqriankc"; depends=[]; }; Rwofost = derive2 { name="Rwofost"; version="0.6-3"; sha256="0a6fp2hkf51hqmbyp7mlhhnzzxj2gcq0kdrlcm3qmpkv0y44wmmw"; depends=[meteor Rcpp]; }; Rwordseg = derive2 { name="Rwordseg"; version="0.3-2"; sha256="10jhfalh45rrcm76hwz4b5yl408ndx2wkr0i3q1avx6z6i45d8s6"; depends=[HMM tmcn]; }; + Rwtss = derive2 { name="Rwtss"; version="0.8.0"; sha256="05mbj9vpjgp2jix9g5a2g3z9ywpipqanckqxah8g9chis2kvhwv9"; depends=[assertthat dplyr geosphere ggplot2 httr jsonlite lubridate magrittr purrr reshape2 stringr tibble zoo]; }; RxCEcolInf = derive2 { name="RxCEcolInf"; version="0.1-4"; sha256="0qyhxqd5yi4d1prj0i4g3k29zi0mx6wkjx24ynb4arxw6h1vabh4"; depends=[coda lattice MASS MCMCpack mvtnorm]; }; + RxODE = derive2 { name="RxODE"; version="1.0.8"; sha256="0ggdik20i2plgyrhkf2rdqsj3ik8b4cpaq6y5nmwfq87fijirgl7"; depends=[assertthat backports BH checkmate cli dparser ggplot2 inline lotri magrittr memoise PreciseSums qs Rcpp RcppArmadillo RcppEigen rex sitmo StanHeaders sys]; }; RxnSim = derive2 { name="RxnSim"; version="1.0.3"; sha256="0fi4aic2brfbl6rsnnfwqq7l8ygvlmr98w0v749l3djpgn7sfrig"; depends=[data_table fingerprint rcdk rJava]; }; Rxnat = derive2 { name="Rxnat"; version="1.0.14"; sha256="00fl68pa0c2vy4xlny67pn41lzgm7b97wgg3dwm6z35izca62l11"; depends=[dplyr httr RCurl tibble]; }; Ryacas = derive2 { name="Ryacas"; version="1.1.3.1"; sha256="0c258p7ibas4xbq1wh8c1nfqf6r9d0hicrf8mkkyriw4mb6wmzqq"; depends=[magrittr Rcpp]; }; @@ -4237,19 +4383,23 @@ in with self; { SACOBRA = derive2 { name="SACOBRA"; version="1.2"; sha256="1v45l56vifkg3v2bfhk3kfg4fn0dfvrjcgy13zzymm8blr7vazi5"; depends=[mgcv R6 testit]; }; SADEG = derive2 { name="SADEG"; version="1.0.0"; sha256="02ilykbdanx1isbd80c43hqpzkckq6dg40y0rklcnck6v96qky3n"; depends=[]; }; SADISA = derive2 { name="SADISA"; version="1.2"; sha256="0yn7f360wl5ykys5zln159xh2h8bx7zb5ddwhv1migjlqry506hp"; depends=[DDD pracma]; }; + SAFARI = derive2 { name="SAFARI"; version="0.1.0"; sha256="10fmav9dbq5kbgy8gjsp3561vi46bjvkh2wqjs39vx5z8x1ml7i3"; depends=[caTools EBImage lattice png]; }; SAFD = derive2 { name="SAFD"; version="2.1"; sha256="078ki9wrmcf80bwhx4d56gas79xrc17a0081i13yxvjqn6w7f7jd"; depends=[]; }; SAGMM = derive2 { name="SAGMM"; version="0.2.4"; sha256="18ig7ncmrfs5cyc28xpbqk9zjhwqfp7gwix7y2v1j4j2wbdc2hzs"; depends=[lowmemtkmeans mclust MixSim Rcpp RcppArmadillo]; }; SALES = derive2 { name="SALES"; version="1.0.0"; sha256="1kjmlwa4v2i7hzm947xby9jr0irsf4c851f7jyqyhqna9c65rx0g"; depends=[Matrix]; }; SALTSampler = derive2 { name="SALTSampler"; version="1.1.0"; sha256="1lh1w5kcx2sqv5czpfypdbq5mw7pxjbdk0vyg23zzjs26ynbdkn9"; depends=[lattice]; }; SAM = derive2 { name="SAM"; version="1.1.2.1"; sha256="01gj9k1gf35vm11p0p590irqc5daaiwmq05rl2v3n8h2azaz1c7l"; depends=[Rcpp RcppEigen]; }; SAMBA = derive2 { name="SAMBA"; version="0.9.0"; sha256="0gxc1s82bfhqj1rpmp0fm87frv77rgr8qjqai7zdgfz3jm474any"; depends=[optimx survey]; }; + SAMGEP = derive2 { name="SAMGEP"; version="0.1.0-1"; sha256="01f460vk60sl3f9cg2pqcpi5r2rayjhgsp73w1ik1g4rhrs4bl9s"; depends=[abind doParallel foreach mvtnorm nlme nloptr pROC Rcpp RcppArmadillo]; }; SAMM = derive2 { name="SAMM"; version="1.1.1"; sha256="175jk3s9w68ccw1h019380lp9cajfsy3zigcnplp87pcn3qg7x2i"; depends=[Rcpp RcppArmadillo]; }; + SAMTx = derive2 { name="SAMTx"; version="0.1.0"; sha256="087p97ym12pws0cr91a0yrcjnsd14bnkjq4fv5227cw3lx0fp34j"; depends=[BART]; }; SAMUR = derive2 { name="SAMUR"; version="0.6"; sha256="0iyv7ljjrgakgdmpylcxk3m3xbm2xwc6lbjvl7sk1pmxvpx3hhhc"; depends=[Matching]; }; SAMURAI = derive2 { name="SAMURAI"; version="1.2.1"; sha256="02fipbjcsbp2b2957x6183z20icv1yly2pd1747nyww9bmpa7ycm"; depends=[metafor]; }; + SAMtool = derive2 { name="SAMtool"; version="1.1.2"; sha256="1f1ar41j3cwy1rz631mbcdwp8dgr1jwf3wna4rjkh0pwgdx6p7n7"; depends=[corpcor dplyr gplots MSEtool RcppEigen rmarkdown snowfall TMB]; }; SAPP = derive2 { name="SAPP"; version="1.0.8"; sha256="1lb148s8rdx1phmx8ihncgb45iqxzracxznys7zyzs8qcf6hm5wq"; depends=[]; }; SAR = derive2 { name="SAR"; version="1.0.3"; sha256="1cnf0hsq82lzssvz5xs2abvnrjxda0g6mjx70a1j223zdwjqmw64"; depends=[AzureRMR AzureStor dplyr httr jsonlite Matrix R6 Rcpp RcppArmadillo RcppParallel]; }; SARP_compo = derive2 { name="SARP.compo"; version="0.1.3"; sha256="1rps2zfwhxf579v29p929jh1qq71ayy1ij6a5ja6y8rdflzhp4hb"; depends=[car igraph]; }; - SARP_moodle = derive2 { name="SARP.moodle"; version="0.8.1"; sha256="1aszwnyg1nisyz1h75j4zn4b276n83l5wyldf2iysjcb45hir2kl"; depends=[base64enc]; }; + SARP_moodle = derive2 { name="SARP.moodle"; version="0.8.7"; sha256="1yq1rvalibdja12461nivaifhdip3w0qzm0z99zcl0h13r6zl55r"; depends=[base64enc]; }; SASPECT = derive2 { name="SASPECT"; version="0.1-1"; sha256="1d3yqxg76h9y485pl5mvlx6ls1076f80b320yvx4zxmqq9yxmaba"; depends=[]; }; SAScii = derive2 { name="SAScii"; version="1.0"; sha256="0nq859xmrvpbifk8q1kbx3svg61rqdg8p8gr1pn85fr0j3w7h666"; depends=[]; }; SASmarkdown = derive2 { name="SASmarkdown"; version="0.4.3"; sha256="0jc21ylflvv4snik13731acxh9zw79s7hpswk58p2wzvavq8k9zn"; depends=[knitr]; }; @@ -4259,6 +4409,7 @@ in with self; { SAVER = derive2 { name="SAVER"; version="1.1.2"; sha256="1s1kw8idkaj7j90fw4qn9k0wd4vz0sblsk06ry6lm4afcar0p158"; depends=[doParallel foreach glmnet iterators Matrix]; }; SAutomata = derive2 { name="SAutomata"; version="0.1.0"; sha256="0d9q7bm2f7s4aslml40n43vwcdkc8rnn9ygydccwi4b9a7y23k58"; depends=[]; }; SBAGM = derive2 { name="SBAGM"; version="0.1.0"; sha256="0vb1679016b0bhz2xlka9wgr2fxwa0447ymfncm1n5fks60rrnnf"; depends=[forecast MSGARCH rugarch]; }; + SBICgraph = derive2 { name="SBICgraph"; version="1.0.0"; sha256="04c9xb9fdxz62qdsfkdkckvfpccrc7n5j3j5v1lgjywxq6l78wsm"; depends=[glmnet MASS network]; }; SBMSplitMerge = derive2 { name="SBMSplitMerge"; version="1.1.1"; sha256="1h44qwz9gkwwgkac25h4vn0kq3mjvjsyq99yfd8v8g6g8fkkclaq"; depends=[ggplot2 reshape2 scales]; }; SBRect = derive2 { name="SBRect"; version="0.26"; sha256="16g0ciy9q9irypsl8x36i0lavl41j3af13r2si0by8q6wj56pxi4"; depends=[rJava]; }; SBSA = derive2 { name="SBSA"; version="0.2.3"; sha256="1v23lzzziyjlvgn5p2n1qcq2zv9hsyz2w15lbnfi5wvinxhlg8sc"; depends=[Rcpp RcppArmadillo]; }; @@ -4271,7 +4422,7 @@ in with self; { SCBmeanfd = derive2 { name="SCBmeanfd"; version="1.2.2"; sha256="045498q71zqgcg8p3665vwd99a8ybf21y0sa7y8316zw66wb1caz"; depends=[boot KernSmooth]; }; SCCI = derive2 { name="SCCI"; version="1.2"; sha256="08ibazxiqmkm3n9g8bfp0cfq26zmg6x2fxb064g3z05nczsf72db"; depends=[Rcpp]; }; SCCS = derive2 { name="SCCS"; version="1.2"; sha256="13j2vgq4kihkx2bmm8k8z9g2qqfw1kv0imwcicxlxqy7i7dprav9"; depends=[corpcor dummies fda gnm R_methodsS3 survival]; }; - SCEPtER = derive2 { name="SCEPtER"; version="0.2-1"; sha256="19sphwcsj2z05dvpmz7vgxykzyghkfn79jwqvk6d66daman679mv"; depends=[MASS]; }; + SCEPtER = derive2 { name="SCEPtER"; version="0.2-4"; sha256="1098pvq3a7k9czxapszkakc8lr9sfvj7a643iivil5fcqfk0j50r"; depends=[MASS]; }; SCEPtERbinary = derive2 { name="SCEPtERbinary"; version="0.1-1"; sha256="0rab0widfndx94dn1nchhs06q0d57vq2n3xy79p130l9rgp9v489"; depends=[MASS SCEPtER]; }; SCGLR = derive2 { name="SCGLR"; version="3.0"; sha256="10hsvcjgsycap6wkp06snp2zab1ppsp78kyncpbjnm3vp84qm0nz"; depends=[ade4 expm Formula ggplot2 Matrix pROC]; }; SCI = derive2 { name="SCI"; version="1.0-2"; sha256="1jvzkdv15ifgf6a3zjfzzcgw2y2vg0wp7yhiamiaqp8xkm142w49"; depends=[fitdistrplus lmomco]; }; @@ -4279,7 +4430,7 @@ in with self; { SCMA = derive2 { name="SCMA"; version="1.3.1"; sha256="0j0np99mcr8vgpcg664769gdb3rxm665h4jgj3zplihbh5ihxfj1"; depends=[]; }; SCOR = derive2 { name="SCOR"; version="1.1.1"; sha256="0srkn72g1v7hwms68pjmq5sj562blqn27gi628q6q6zlirbmfb9g"; depends=[doParallel foreach iterators]; }; SCORER2 = derive2 { name="SCORER2"; version="0.99.0"; sha256="1a28wga69ip9s98ch2dqgl0qkwa3w6frmaqcvhclc360ik813mxq"; depends=[]; }; - SCORNET = derive2 { name="SCORNET"; version="0.1.0"; sha256="1nmlqmidq0cxfnf5pysgfmv6lkwijfzkx55ijnh9497ynz6yzckn"; depends=[doParallel foreach Matrix pracma Rcpp RcppArmadillo survival]; }; + SCORNET = derive2 { name="SCORNET"; version="0.1.1"; sha256="13aibikvrc3ril4gqki4fk4y7ha85bniqabmaifzbr1dw5xy2wxm"; depends=[doParallel foreach Matrix pracma Rcpp RcppArmadillo survival]; }; SCORPIUS = derive2 { name="SCORPIUS"; version="1.0.7"; sha256="1mswjc1q9dj4yvhx1db50iy041mw3azbi40ha3zjp38fflwcwf2z"; depends=[dplyr dynutils dynwrap ggplot2 lmds MASS Matrix mclust pbapply pheatmap princurve purrr ranger RANN RColorBrewer reshape2 tidyr TSP]; }; SCOUTer = derive2 { name="SCOUTer"; version="1.0.0"; sha256="1s0mmzfz0zhr5v4wagcjwdba8a5f57xr26vwml92dnw6lai37pj4"; depends=[ggplot2 ggpubr]; }; SCPME = derive2 { name="SCPME"; version="1.0"; sha256="0yhsaaa349wbrswcvp7w8c52wzp7rs3528rs4wqa8b3r3fh983mh"; depends=[doParallel dplyr foreach ggplot2 Rcpp RcppArmadillo RcppProgress]; }; @@ -4288,24 +4439,23 @@ in with self; { SCVA = derive2 { name="SCVA"; version="1.3.1"; sha256="1gdicpnbr8bdgrbwwslpwpzw2adpp94p8nhsrkdx0bjlpfhd4g9h"; depends=[ggExtra ggplot2 plotly scales]; }; SCperf = derive2 { name="SCperf"; version="1.1.1"; sha256="1kqi3sv9ds58l20pdcnjrrbf7fin82j73yqj5rbx4kjdw560ylb2"; depends=[]; }; SCtools = derive2 { name="SCtools"; version="0.3.1"; sha256="0vsv9ipz0ys8nrvg7rwr23svqlc5lvjpa6yss79rnjzxarjcyjjz"; depends=[cvTools dplyr furrr future ggplot2 magrittr purrr stringr Synth]; }; - SDALGCP = derive2 { name="SDALGCP"; version="0.3.0"; sha256="1mrx39rspbynnwdpww8vv3rf03589qym70vc9508k7iird5cn0qh"; depends=[geoR maptools mapview Matrix pdist PrevMap progress raster sp spacetime spatstat splancs]; }; + SDALGCP = derive2 { name="SDALGCP"; version="0.4.0"; sha256="0az11v9dj3pwl5q2kr2apac06b5hg0msi5r17qrcik1d65k18hm0"; depends=[geoR maptools mapview Matrix pdist PrevMap progress raster sp spacetime spatstat spatstat_geom splancs]; }; SDAR = derive2 { name="SDAR"; version="0.9-55"; sha256="1a1dy4wpzhfaqxv4x8knazh4kjx042rnkmvxf62r6wkgbfvq4r6b"; depends=[grImport2 linbin readxl]; }; SDCNway = derive2 { name="SDCNway"; version="1.0.1"; sha256="0zmjc3xh4qvwyrq4ma2k6q08f4ny4iqnl5a640pj17jk8awzwbg0"; depends=[dplyr ggplot2 MASS plyr Rdpack]; }; SDD = derive2 { name="SDD"; version="1.2"; sha256="0wzgm1hgjv5s00bpd7j387qbvn5zvyrrd5fr2rgyll4cw9p4sd33"; depends=[Hmisc rgl rpanel sm tseries]; }; SDDE = derive2 { name="SDDE"; version="1.0.1"; sha256="14vql1bypn409w9xcx1jdzff6apiagcz2wng3y24h3mk7yjv9bzy"; depends=[doParallel foreach igraph iterators]; }; - SDEFSR = derive2 { name="SDEFSR"; version="0.7.21"; sha256="02p46vbyzx5lmyxyhks10l94kz18pldgkxxg2zi5vys80gpy5jd2"; depends=[]; }; - SDLfilter = derive2 { name="SDLfilter"; version="2.0.1"; sha256="0ry7aqcc2ihh2b10xxs0fv4syibwsh1ziynjq6q8wbli4v303kcf"; depends=[data_table dplyr ggmap ggplot2 ggsn gridExtra lubridate maps plotKML plyr pracma raster sp trip]; }; + SDEFSR = derive2 { name="SDEFSR"; version="0.7.22"; sha256="10rxq2y7a9rbzgl5s5fdh93jm4w5kqbyyflw5xfsdwymjj9p4b7m"; depends=[foreign ggplot2 shiny]; }; + SDLfilter = derive2 { name="SDLfilter"; version="2.1.0"; sha256="05kf142k32p63icpmad49vw7kxsrvd2hzykcphdk0dahp6jbc9vj"; depends=[data_table dplyr ggmap ggplot2 ggsn gridExtra lubridate maps plotKML plyr pracma raster sp trip]; }; SDMPlay = derive2 { name="SDMPlay"; version="1.3"; sha256="0653yzw00ix1kh302h1fs735956dw0m2zvp2ng472f8qywrb395s"; depends=[dismo gbm raster]; }; - SDMtune = derive2 { name="SDMtune"; version="1.1.3"; sha256="05hbisg734w7l6ynr8302ynika4gnwnih5kfgrf4v730svl0hfp7"; depends=[dismo gbm ggplot2 jsonlite maxnet nnet progress randomForest raster Rcpp rlang rstudioapi stringr whisker]; }; + SDMtune = derive2 { name="SDMtune"; version="1.1.4"; sha256="04r82xzbj6kzl4cnkkhfvc92ky3bmhq55plyd2fjwv9mmyzi72za"; depends=[dismo gbm ggplot2 jsonlite maxnet nnet progress randomForest raster Rcpp rlang rstudioapi stringr whisker]; }; SDT = derive2 { name="SDT"; version="1.0.0"; sha256="1jwpfd1pnzy9wcl90qv5bgwi19shsw9064dvml9zwbif8yw8dzjj"; depends=[quadprog]; }; SDaA = derive2 { name="SDaA"; version="0.1-3"; sha256="0z10ba4s9r850fjhnrirj2jgnfj931vwzi3kw9502r5k7941lsx0"; depends=[]; }; SDraw = derive2 { name="SDraw"; version="2.1.13"; sha256="1kx8kfga3zspfdgf9vq2lclszrhf3bfwkfhwqri64kn8fdr34jsq"; depends=[covr deldir rgeos sp spsurvey]; }; SE_EQ = derive2 { name="SE.EQ"; version="1.0"; sha256="09fqx2rcqpiv072l6gqgfz9pdhas98q4kkkm7m4y28k13q2gicgl"; depends=[MASS]; }; - SEA = derive2 { name="SEA"; version="1.0"; sha256="1jcjgiy8459d8f603kiipcdq6d2awfcqzdv13hrdjgxpfnd1n1ha"; depends=[data_table doParallel foreach kolmim KScorrect MASS shiny]; }; + SEA = derive2 { name="SEA"; version="2.0"; sha256="1pw1509qjjqz63a8biwakdxqgln7kjviacqrjvp1323vf55bi4fs"; depends=[data_table doParallel foreach kolmim KScorrect MASS shiny]; }; SEAsic = derive2 { name="SEAsic"; version="0.1"; sha256="1mg01sag6n1qldjvmvbasac86s7sbhi4k99kdkav2hdh6n9jg467"; depends=[]; }; SECFISH = derive2 { name="SECFISH"; version="0.1.7"; sha256="0yd9k6anz9g4psg5kh1bhp0lr1i4y7in1m0mxk4qp14nl1zqy4fy"; depends=[ggplot2 Hmisc optimization]; }; SECP = derive2 { name="SECP"; version="0.1-4"; sha256="0a4j0ggrbs0jzcph70hc4f5alln4kdn2mrkp3jbh321a6494kwl1"; depends=[SPSL]; }; - SEER2R = derive2 { name="SEER2R"; version="1.0"; sha256="0lk0kkp8sv3nl19zwqd7449mmjxsj3pqpzdmqf70qf8xh2pqyvzd"; depends=[]; }; SEERaBomb = derive2 { name="SEERaBomb"; version="2019.2"; sha256="0rlah68jbaw4qbqq5rnlrm6m9ckz7igbsay6iq1yvk4gy24p9bfh"; depends=[DBI demography dplyr forcats ggplot2 labelled LaF mgcv openxlsx plyr purrr Rcpp readr reshape2 rgl RSQLite scales stringr survival tibble tidyr WriteXLS]; }; SEIRfansy = derive2 { name="SEIRfansy"; version="1.1.0"; sha256="1n7fgn3l4r3xxdppgj9maks151jbamysmlmcdfq13mp6b6c98sja"; depends=[arm DescTools dplyr ggplot2 ggpubr knitr magrittr patchwork pbapply rlang scales]; }; SEL = derive2 { name="SEL"; version="1.0-2"; sha256="1nrk0fx6ff330abq8askvp0790xnfv00m3sraqcr32hciw6ks421"; depends=[lattice quadprog]; }; @@ -4313,22 +4463,22 @@ in with self; { SEMID = derive2 { name="SEMID"; version="0.3.2"; sha256="0v1zrx5xxramsg2zzk7b2fyv6kky7xb1q1cg8vi6zg6ln9vgm2dk"; depends=[igraph R_methodsS3 R_oo R_utils]; }; SEMModComp = derive2 { name="SEMModComp"; version="1.0"; sha256="1za67470f13z8jsy3z588c7iiiz993d3vjqrb8v9fann2r6sf1md"; depends=[mvtnorm]; }; SEMrushR = derive2 { name="SEMrushR"; version="0.1.0"; sha256="19prwbh429ra69nz3nx4vzqmb46xssci74rk9mhpnzbi52ycg5gd"; depends=[]; }; - SEMsens = derive2 { name="SEMsens"; version="0.2.6"; sha256="0zqqs5np7z0nh8brxgjx7v3h178hjn29iqzg4rs7dpgqy6pvrdrs"; depends=[lavaan]; }; + SEMsens = derive2 { name="SEMsens"; version="1.0.1"; sha256="0s8x42hpjzpqp9z0r1yj3bm8wgrz2grl0xdnk2ydkm9mmiaclylr"; depends=[lavaan]; }; SETPath = derive2 { name="SETPath"; version="1.0"; sha256="1dpgmki0dhph13h1fd3mbf308746wccgfz5g5gdm7bwbjnmjzd98"; depends=[]; }; SEchart = derive2 { name="SEchart"; version="0.1"; sha256="19gqcd6xzwg37nzc67p88ip4i0v2f59ds85xfw9qq8lybvdm76k2"; depends=[JM]; }; SFS = derive2 { name="SFS"; version="0.1.4"; sha256="1pig64pj30yyfzyv97f74gshw4lnklrx0npp4da3absk6anb3iv7"; depends=[Rcpp RcppArmadillo]; }; + SFSI = derive2 { name="SFSI"; version="0.3.0"; sha256="0al7xcblhib7qj9b58dxxp5wd7jmg0mcyh5i106awz5zz99p53gi"; depends=[float]; }; SFtools = derive2 { name="SFtools"; version="0.1.0"; sha256="08k2ywkpk1pzp0qcwm7qx9gnv9hglspl9hrsrrfblagdpkw6rm2x"; depends=[doParallel ff wordspace]; }; SGB = derive2 { name="SGB"; version="1.0.1"; sha256="0j48fx9bf2k8k3ykp629jfi1jbs23673nz6rg54rvcrrsl6hb9v3"; depends=[alabama Formula MASS numDeriv]; }; - SGCS = derive2 { name="SGCS"; version="2.7"; sha256="12kyfkd2phdmiyflgay2ndl6z5f9gz425mxi48wqs9ar3gh6akdw"; depends=[spatstat]; }; SGL = derive2 { name="SGL"; version="1.3"; sha256="055mx876ydg4kzvcm6rxfkxqz849zgzkzsskvrfgwj9fs1k6ja2v"; depends=[]; }; SGP = derive2 { name="SGP"; version="1.9-5.0"; sha256="0jsn6fvd5vaw6m6d7l83nphl19xmql4ir50av5x84rsi7qv461gg"; depends=[Cairo callr colorspace crayon data_table digest doParallel doRNG equate foreach gridBase gtools iterators jsonlite matrixStats plotly quantreg randomNames rngtools RSQLite sn toOrdinal]; }; - SGPdata = derive2 { name="SGPdata"; version="23.0-0.0"; sha256="0801v5fq18bpy6sqsp1g6g7azi5ldl3xqpkrp19gsfbl4kcfbp3m"; depends=[crayon data_table]; }; - SHAPforxgboost = derive2 { name="SHAPforxgboost"; version="0.0.4"; sha256="0k6bg27wqnkzv82bcahbapmqhiz6rvnx81m23zbjw58c7lwshgnq"; depends=[BBmisc data_table ggExtra ggforce ggplot2 ggpubr RColorBrewer xgboost]; }; + SGPdata = derive2 { name="SGPdata"; version="25.0-0.0"; sha256="0sbsi641krz9c4pr4627jrf58zkdk7gkmk0mm2bw10zkb5dr16my"; depends=[crayon data_table]; }; + SHAPforxgboost = derive2 { name="SHAPforxgboost"; version="0.1.1"; sha256="106nsf02b1w3yshb55lwnyw1rl1a60162v2wk8znjz3b4ln3mqj5"; depends=[BBmisc data_table ggExtra ggforce ggplot2 ggpubr RColorBrewer xgboost]; }; SHELF = derive2 { name="SHELF"; version="1.7.0"; sha256="0rhxagblk8bmwd4wfbjf52dh6y1brajp6xn8rsjx7q0z4brgcr23"; depends=[ggExtra ggplot2 ggridges gridExtra Hmisc MASS rmarkdown scales shiny shinyMatrix tidyr]; }; SHIP = derive2 { name="SHIP"; version="1.0.2"; sha256="0b83cclibdz1r7sz968nmca4najwgps9wrdlsh4gxrl7fq40k4ln"; depends=[]; }; SHT = derive2 { name="SHT"; version="0.1.3"; sha256="016ll3dclnd3arr7x9vvwls84kypqnnm24r9jmcxkk7n8zl0xwb9"; depends=[fastclime pracma Rcpp RcppArmadillo Rdpack]; }; SI = derive2 { name="SI"; version="0.2.0"; sha256="0i6kpaw5yk39skm77nf56ai25clkparz3l8qx0223jrmdqbf97b7"; depends=[]; }; - SIBER = derive2 { name="SIBER"; version="2.1.5"; sha256="01kx3sdw73pba7c1zj40q9z575x41dji20a5sjpkh5jh1byyxs6j"; depends=[dplyr ggplot2 hdrcde magrittr mnormt purrr rjags spatstat spatstat_utils tidyr]; }; + SIBER = derive2 { name="SIBER"; version="2.1.6"; sha256="1ymr1y2c984nnjkj5nwc1mi4ixdwg8d191nn58i0dvckzm922z80"; depends=[dplyr ggplot2 hdrcde magrittr mnormt purrr rjags spatstat spatstat_geom spatstat_utils tidyr]; }; SIBERG = derive2 { name="SIBERG"; version="2.0.2"; sha256="0wfx1dpjd09gb736sm2xhrkba26nwnzn5x575h39n2g33jwqqy2r"; depends=[mclust]; }; SID = derive2 { name="SID"; version="1.0"; sha256="1446zy4rqbw0lpyhnhyd06dzv238dxpdxgmsk34hqv7g3j7q5h1w"; depends=[igraph Matrix pcalg RBGL]; }; SIDES = derive2 { name="SIDES"; version="1.15"; sha256="1s3qxs7rzff6jr05dz6w13k8ziacbwwvc4bm8rgyjs0bry93zdmb"; depends=[doParallel foreach MASS memoise multicool nnet survival]; }; @@ -4336,26 +4486,26 @@ in with self; { SII = derive2 { name="SII"; version="1.0.3.1"; sha256="1xvk04b7725ksfd7h4p7px5zanbf6s7xlmjpb7w0nvbi6km2f7ri"; depends=[]; }; SILGGM = derive2 { name="SILGGM"; version="1.0.0"; sha256="1lhmisgg2zbfksl7czz0fqag3732gkjc44n615ipxbdi2pvnc7m0"; depends=[glasso MASS Rcpp reshape]; }; SILM = derive2 { name="SILM"; version="1.0.0"; sha256="1iaivpdx18djfm5dqak0q9kfl1xfrnx3gk5x9a4y53h1d7jhl9p6"; depends=[glmnet hdi scalreg SIS]; }; - SIMMS = derive2 { name="SIMMS"; version="1.3.0"; sha256="1vnq135sc6f0nn53dmi38as7hzjvifbz3mvhg08zjk2v4rjw8hpw"; depends=[doParallel foreach glmnet MASS randomForestSRC survival]; }; + SIMMS = derive2 { name="SIMMS"; version="1.3.1"; sha256="0kgaky1hpvvbs2hbzaili9h9pv34c5drfh0d1rc8vf9099xw8575"; depends=[doParallel foreach glmnet MASS randomForestSRC survival]; }; SIN = derive2 { name="SIN"; version="0.6"; sha256="0vq80m3vl8spdnlkwvwy0gk3ziyybqzjp3scnfdcpn942ds7sgg9"; depends=[]; }; - SIPDIBGE = derive2 { name="SIPDIBGE"; version="0.1.0"; sha256="1vvlw2m16r3sxayn21xhqawl3axsfm3f894n9ql6qwz6v17l6xkr"; depends=[cli COVIDIBGE PNADcIBGE png PNSIBGE POFIBGE purrr rstudioapi tibble tidyverse]; }; SIRE = derive2 { name="SIRE"; version="1.1.0"; sha256="0f624j087k7krg73bqn2qxdgzq66jyhvzz8n024vz3h4hwagxs5n"; depends=[dplyr igraph magrittr MASS Matrix matrixcalc numDeriv psych Rsolnp stringr systemfit]; }; SIS = derive2 { name="SIS"; version="0.8-8"; sha256="1f5czwcgpmmn8habm24p3xh4w7jn2faais2x2gmaiq4dpjfnv6h8"; depends=[glmnet ncvreg survival]; }; SISIR = derive2 { name="SISIR"; version="0.1-1"; sha256="13mxw0ad4y29f303zarhhdpw2655ckax1g429grnah07p4kfpkgh"; depends=[doParallel expm foreach glmnet Matrix RSpectra]; }; - SITH = derive2 { name="SITH"; version="1.0.1"; sha256="1g200zc4dbwy7822qhcsi571plm3fpvsdpxipm2ra9zm0x9a4df3"; depends=[Rcpp scatterplot3d]; }; + SITH = derive2 { name="SITH"; version="1.1.0"; sha256="1626nsbnz4fh49wymxm1cqb0nrfyxhmh9fmdxr62dzj5b53amknc"; depends=[Rcpp scatterplot3d]; }; SIfEK = derive2 { name="SIfEK"; version="0.1.0"; sha256="037ps6yfy7w6i8vm0b78c8w9kdmw312dl5nc2qz86rfk8kjg7w27"; depends=[MASS numDeriv ramcmc smfsb]; }; SK = derive2 { name="SK"; version="1.1"; sha256="19yg7yc2k4zz29bh42lw2jpjvkdj33f26xkfs8vz8lpp98yjf2vx"; depends=[FitAR GD MASS RColorBrewer rgeos rtop sp]; }; SKAT = derive2 { name="SKAT"; version="2.0.1"; sha256="1iz8s2r295w36m44s2frrz00q4zm78fyzx7kprmnz4kbg3spqqy8"; depends=[Matrix SPAtest]; }; + SLBDD = derive2 { name="SLBDD"; version="0.0.2"; sha256="1ixynzrj6vdxn406zcisrkhf9yr172s80k70dishrainkpw2dk58"; depends=[cluster corpcor fGarch forecast glmnet gsarima imputeTS MASS Matrix matrixcalc MTS rnn TSclust tsoutliers]; }; SLC = derive2 { name="SLC"; version="0.3"; sha256="0l0y1sjj0glsb7vwla99ijclcgaq2y85bgz1wqm348n4shsmm2rs"; depends=[]; }; SLDAssay = derive2 { name="SLDAssay"; version="1.8"; sha256="04ykj7s9kpvg5bmf7x16154kfpdy45b7y7hhyh31sxlscv7c5bbp"; depends=[]; }; - SLEMI = derive2 { name="SLEMI"; version="1.0"; sha256="1yfyqxl9sszym418p64zalc2yna9s9qgk9wvviz7n44icsdps33q"; depends=[caret corrplot doParallel e1071 foreach ggplot2 ggthemes gridExtra Hmisc nnet reshape2 stringr]; }; + SLEMI = derive2 { name="SLEMI"; version="1.0.1"; sha256="07bsy0v8grx1l5837jr8mdab08521kxivhwr59q3s0v6f08683yd"; depends=[caret corrplot doParallel e1071 foreach ggplot2 ggthemes gridExtra Hmisc nnet reshape2 stringr]; }; SLHD = derive2 { name="SLHD"; version="2.1-1"; sha256="0y3ilxd0phmks8zkmpgw7p5zrkwq4k95h976cwk58pavvhfwj9kb"; depends=[]; }; SLICER = derive2 { name="SLICER"; version="0.2.0"; sha256="10i0hfl6js26n8xwk9pldzm9vv7hmii6gzj04lhqy0g3njds25kp"; depends=[alphahull igraph lle]; }; SLIDE = derive2 { name="SLIDE"; version="1.0.0"; sha256="0x4fm29r7icg33k8gw3vqvxib8n9a1xwg484x9yffybips9ka22c"; depends=[]; }; - SLOPE = derive2 { name="SLOPE"; version="0.3.2"; sha256="0hjp34lwwrg60ccwvdy1hnl5vbd8lhyc2j1jp3kfx773akdrqvj1"; depends=[foreach lattice Matrix Rcpp RcppArmadillo]; }; + SLOPE = derive2 { name="SLOPE"; version="0.3.3"; sha256="14wzwn641ag9a8a3yk0w5m63641f69wsq9mpbp4cfrgads9d3zxn"; depends=[foreach lattice Matrix Rcpp RcppArmadillo]; }; SLTCA = derive2 { name="SLTCA"; version="0.1.0"; sha256="0pq87fbi79srgjblv40yyj3w1dzf115kfidp8gi564l8xf0qilqg"; depends=[geepack Matrix mvtnorm VGAM]; }; SMARTAR = derive2 { name="SMARTAR"; version="1.1.0"; sha256="0ymhka4pjlqlnpv47abmc76ggijfw83i3jp9mrspnzcnb4d378xm"; depends=[MASS]; }; - SMARTbayesR = derive2 { name="SMARTbayesR"; version="1.0.1"; sha256="0fzmdqsqai5wvn9fvknjlfnyxiz6ya0a9v2v3gw8g87fza3p8nxi"; depends=[]; }; + SMARTbayesR = derive2 { name="SMARTbayesR"; version="1.0.2"; sha256="0xjljjrv0wczv0kw388gqh2vs8wncnr6nahs6k62jg5n42236cqp"; depends=[]; }; SMARTp = derive2 { name="SMARTp"; version="0.1.1"; sha256="0gkhl9j4l67brfmln28m4q4hfi271jlg5aijnjwahlj8nsi6384y"; depends=[covr mvtnorm sn]; }; SMC = derive2 { name="SMC"; version="1.1"; sha256="1r4ajgi785lmpnlxrba0n6phmk1f0mb6b5yqk6hx8gng2w8ggclz"; depends=[]; }; SMCRM = derive2 { name="SMCRM"; version="0.0-3"; sha256="1x06w00sdijhg5h1s61q4ym5wgk97pw9md6api7if2cxjv7h5zcy"; depends=[]; }; @@ -4363,28 +4513,29 @@ in with self; { SMFI5 = derive2 { name="SMFI5"; version="1.0"; sha256="10qp33l0dig00y9gfhpzqig6dbkjw76ch9pfq64dn4xrdkpq1kx5"; depends=[corpcor ggplot2 reshape]; }; SMFilter = derive2 { name="SMFilter"; version="1.0.3"; sha256="1islyqg9w08mvs2kf0ddmdlp885arzp0jy7mqvixjm4ayi5zfrri"; depends=[]; }; SMITIDstruct = derive2 { name="SMITIDstruct"; version="0.0.5"; sha256="12ffxj96w3pi18l0scz5sd3dl37vd4vg2wcfykaxdhf8z142ha3k"; depends=[Biostrings ggplot2 sf]; }; - SMITIDvisu = derive2 { name="SMITIDvisu"; version="0.0.8"; sha256="1g5h0ciwfh53bfdpsngf93zg3qrd596281gjlsgi4nsjzrjfnf3q"; depends=[htmlwidgets jsonlite magrittr Rcpp yaml]; }; + SMITIDvisu = derive2 { name="SMITIDvisu"; version="0.0.9"; sha256="143zz49rx7106v0a46dn1jssqxp60djf5rycfy38167zz7f9wx3y"; depends=[htmlwidgets jsonlite magrittr Rcpp yaml]; }; SMLE = derive2 { name="SMLE"; version="0.4.1"; sha256="1ssry4kcqz31na2xns2sqfc7nifclhg8bxi1cnri96b1k6zd29qd"; depends=[doParallel foreach glmnet mvnfast]; }; SMLoutliers = derive2 { name="SMLoutliers"; version="0.1"; sha256="10frs7wcyn368m7fvw2f1cyd0xqr6sv5jziixnyvr8q5fadyl2p0"; depends=[]; }; SMM = derive2 { name="SMM"; version="1.0.2"; sha256="1g1c7ssdcnzgv6b221ya1xrypg2ksahc7qj1042j8nlx5wg29cld"; depends=[DiscreteWeibull seqinr]; }; SMMA = derive2 { name="SMMA"; version="1.0.3"; sha256="1nwxp447m1igm7dlxw5kqw472f8470svwx9awjp2d84m66wplinr"; depends=[Rcpp RcppArmadillo]; }; - SMMT = derive2 { name="SMMT"; version="1.0.5"; sha256="19vx9w04z5x4747c07zb4qnw6y5mgs6mirc6qris9ma5sa65dvh6"; depends=[curl dplyr tibble XML]; }; + SMMT = derive2 { name="SMMT"; version="1.0.7"; sha256="1jbxz905zaxv19rlw9xs29lnc56nyhcslr322kz2rdx1jk83m28f"; depends=[curl dplyr rvest tibble XML xml2]; }; SMNCensReg = derive2 { name="SMNCensReg"; version="3.0"; sha256="06542jacy74mw6ic0i1ml09pn45sll96bya7dqja6bg9yp0m6bvr"; depends=[Matrix PerformanceAnalytics]; }; SMPracticals = derive2 { name="SMPracticals"; version="1.4-3"; sha256="0zxq84f9i3b86xx6msb25b61gyj9k09iab2b7wg4d93yas9qzayf"; depends=[ellipse MASS nlme survival]; }; SMR = derive2 { name="SMR"; version="2.0.1"; sha256="0qy56fmismcjklpf29ic2gi1g8ajdjpxsl0akb9cqzyisyf641ia"; depends=[]; }; SMUT = derive2 { name="SMUT"; version="1.1"; sha256="029ishj3jfq957bbkb2xw4jj0qpm4dasb8vpdik43pvd670mgq5s"; depends=[MASS Rcpp RcppEigen SKAT]; }; SMVar = derive2 { name="SMVar"; version="1.3.3"; sha256="17wr4lixy3p32gr4jq02d7zsr88yrbddjsvynzdsdrwbxf4mwqhp"; depends=[]; }; - SNFtool = derive2 { name="SNFtool"; version="2.3.0"; sha256="1yplcwmy7jhsvz19r82ivpxfqav7q88jcf8d0r2k8ll9iqmi1dbc"; depends=[alluvial ExPosition heatmap_plus]; }; SNPMClust = derive2 { name="SNPMClust"; version="1.3"; sha256="1gad1jfla4qpczh8vpwyss5cckzgpffsyj0d71r8drbspr4i3r90"; depends=[MASS mclust]; }; SNPassoc = derive2 { name="SNPassoc"; version="2.0-2"; sha256="16raq5nkm24xqfshncwmf46z2naf2fcixgjs9b7gy1368wn3ahzl"; depends=[BiocStyle ggplot2 haplo_stats mvtnorm plyr poisbinom survival tidyr]; }; SNPknock = derive2 { name="SNPknock"; version="0.8.2"; sha256="121pdgvdffj61hw8x8m76na0cg5iw5gb586q05ikw5d959mmbzrs"; depends=[Rcpp RcppArmadillo RcppProgress Rdpack]; }; SNPmaxsel = derive2 { name="SNPmaxsel"; version="1.0-3"; sha256="0pjvixwqzjd3jwccc8yqq9c76afvbmfq0z1w0cwyj8bblrjpx13z"; depends=[combinat mvtnorm]; }; + SNSchart = derive2 { name="SNSchart"; version="1.4.0"; sha256="18rpg2zkqa6bxnbq3s0hlsg4wizz6iw3vckf5z66q3awxqycabg9"; depends=[MASS]; }; SNSequate = derive2 { name="SNSequate"; version="1.3.3"; sha256="1qadhk2acpr0lkh2z37ivif9dbp7zb31lfn32ch2sb0z9pp56his"; depends=[emdbook knitr magic plyr progress statmod]; }; SNscan = derive2 { name="SNscan"; version="1.0"; sha256="1s7dxi7faih0phx5wk2xrrzhvfwicq3h2cg8x2klwbrslin973lz"; depends=[igraph poweRlaw Rmpfr]; }; SOAR = derive2 { name="SOAR"; version="0.99-11"; sha256="1n38gx5sxpkqfkk4y6vpp6g19b8bs5bisni9wn6311s0csizp86m"; depends=[]; }; SOFIA = derive2 { name="SOFIA"; version="1.0"; sha256="1jlaggxa2nz2r5yb2xmf0dh5wmxfdk6xwn0l3nwsqh82vyxhp7l9"; depends=[png]; }; SOIL = derive2 { name="SOIL"; version="1.1"; sha256="0dvfh84xjzald51kmdb546par2rbjdn3nys9y9w7cvafv2lc5yj9"; depends=[brglm2 glmnet MASS ncvreg]; }; SOLOMON = derive2 { name="SOLOMON"; version="1.0-1"; sha256="0z91wsrgdir25ks4dnirzsg4f1ngal7n40235m3w43j6y6dhkqrc"; depends=[]; }; + SOMEnv = derive2 { name="SOMEnv"; version="1.1.1"; sha256="0ldab56ckprfa511cljka8vpdf9mzx5w1n0v4gc2cm326dmksb76"; depends=[colourpicker dplyr kohonen openair plyr rlist shiny shinycssloaders shinycustomloader]; }; SOMbrero = derive2 { name="SOMbrero"; version="1.3-1"; sha256="083zbbazf3d9n9a8cv758fr238qs6a895wbbjyjs6bksc355ykgc"; depends=[ggplot2 ggwordcloud igraph interp markdown metR scatterplot3d shiny]; }; SOPIE = derive2 { name="SOPIE"; version="1.5"; sha256="0isvb2vzzpn57bq0ix2pfaqdnl5z8qk6v6fvf15vnxcqg2sm63q5"; depends=[ADGofTest circular]; }; SOR = derive2 { name="SOR"; version="0.23.1"; sha256="1accs4bqy080nfmgkdg7bgamdrcwcn01y6nydvvq12w3v8asdvwh"; depends=[Matrix]; }; @@ -4392,7 +4543,8 @@ in with self; { SP2000 = derive2 { name="SP2000"; version="0.2.0"; sha256="01wrc7p36js20jv04zhphj2vq7qqfgxmrzic066wij0c0mnh0xn5"; depends=[DT jsonlite pbmcapply purrr rlist tibble urltools XML xml2]; }; SPADAR = derive2 { name="SPADAR"; version="1.0"; sha256="0xzhcy5nglwx9j2jkm3i9xj1iw1y9wbf6rwfjyhpiwwq6qn8mn5r"; depends=[mapproj RCEIM]; }; SPARQL = derive2 { name="SPARQL"; version="1.16"; sha256="0gak1q06yyhdmcxb2n3v0h9gr1vqd0viqji52wpw211qp6r6dcrc"; depends=[RCurl XML]; }; - SPARSEMODr = derive2 { name="SPARSEMODr"; version="1.0"; sha256="0gifz04i35v5vsw1ad9zrjwj6rxypwqbd14haadgzdzsscjj1ibs"; depends=[data_table future future_apply geosphere lubridate Rcpp tidyverse viridis]; }; + SPARSEMODr = derive2 { name="SPARSEMODr"; version="1.0.1"; sha256="0l44idsh34c334f340wv9l0b3wzfa0514yb0y0yr005qggn9liii"; depends=[data_table future future_apply geosphere lubridate Rcpp tidyverse viridis]; }; + SPARTAAS = derive2 { name="SPARTAAS"; version="1.0.0"; sha256="1kdb1acm6f7vzl8y9r6ypzy7n5ixlxh7snm7yqii8959dg06nfjw"; depends=[ape cluster colorspace crayon dplyr explor FactoMineR foreign fpc ggdendro ggplot2 htmlwidgets ks leaflet maptools mapview markdown plotly rgdal rstudioapi scatterD3 shiny shinydashboard shinyjqui shinyjs shinythemes shinyWidgets sp stringr tidyr]; }; SPAS = derive2 { name="SPAS"; version="2020.1.1"; sha256="1bvnyxg3npxv63kikmr30jgc14f1s1a5vfh40qs50nbzq84pl6bx"; depends=[BB MASS Matrix msm numDeriv plyr RcppEigen TMB]; }; SPAr = derive2 { name="SPAr"; version="0.1"; sha256="068jlsvaxx80ih6n86286m2r75cvy6w0m51vpj4gfclhh38py4p4"; depends=[]; }; SPAtest = derive2 { name="SPAtest"; version="3.1.2"; sha256="1x5r4a6jnizhhazxywb2cf2jj2rx6rfynl6xcscmlix6n394xmxk"; depends=[]; }; @@ -4407,36 +4559,39 @@ in with self; { SPINA = derive2 { name="SPINA"; version="4.1.0"; sha256="0x7y150iq072qqci2niqk7j8pvhcylb7kdvwambg1r1gi3ffycm9"; depends=[]; }; SPIn = derive2 { name="SPIn"; version="1.1"; sha256="109xxrg7bsmmfd6ik85kxrw2qclxbh5ipsh5mmrdl4hki3hnyp2s"; depends=[quadprog]; }; SPODT = derive2 { name="SPODT"; version="0.9-1"; sha256="01yq429a4s63855bwpn2mqjj2k3cz4187kfpi7n7qqdpdvmxz109"; depends=[rgdal sp tree]; }; - SPOT = derive2 { name="SPOT"; version="2.1.10"; sha256="0ciix6cpci0ssybrg98k7cv1x532lynfi2svh3lp6h6y5gydb54s"; depends=[DEoptim ggplot2 glmnet MASS nloptr plotly randomForest ranger rgenoud rpart rpart_plot rsm SimInf smoof]; }; + SPORTSCausal = derive2 { name="SPORTSCausal"; version="1.0"; sha256="1ww1wi3kflwj1f5slfv0mfi7gbaj7y8rk1m3n15szpxb9zm8grks"; depends=[CausalImpact keras]; }; + SPOT = derive2 { name="SPOT"; version="2.4.2"; sha256="01w4gkjprqfj2hymsv6h0xg5hr7kpwrjq06kkh8w4i6grx33yq7x"; depends=[DEoptim ggplot2 glmnet laGP MASS nloptr plgp randomForest ranger rgenoud rpart rpart_plot rsm sensitivity SimInf smoof]; }; SPPcomb = derive2 { name="SPPcomb"; version="0.1"; sha256="1kn3pi3c7g7waill1grm382ixbvnc7z8pbgzqd94hxqzgkivhid7"; depends=[nleqslv]; }; SPREDA = derive2 { name="SPREDA"; version="1.1"; sha256="0fn4p5apjq8zgd3zms2b88ga5wbsv86y59ac5x06w75rf071xglv"; depends=[nlme survival]; }; SPRT = derive2 { name="SPRT"; version="1.0"; sha256="1r4pfqh8k5avi8qgpk5x1cy8lmkn341yvjvd2r7wqwb3mr242r0v"; depends=[]; }; SPSL = derive2 { name="SPSL"; version="0.1-9"; sha256="0kf6mmbvavid3dw2l4fkclk669wi13wkyykhwn5272d6qnhlhhca"; depends=[]; }; - SPUTNIK = derive2 { name="SPUTNIK"; version="1.3"; sha256="0xmd7y0w1wnbavpjhnap2wczprl1xccrgdwgrmv9031lasrd9xv9"; depends=[e1071 edgeR ggplot2 imager infotheo irlba reshape spatstat viridis]; }; + SPUTNIK = derive2 { name="SPUTNIK"; version="1.3.2"; sha256="184zn6hdrgriqa8d0hlh8sh5i95srl3s4qr96bnjf7s77nqaxdzj"; depends=[e1071 edgeR ggplot2 imager infotheo irlba reshape spatstat spatstat_core spatstat_data spatstat_geom spatstat_linnet spatstat_sparse spatstat_utils testthat viridis]; }; SPYvsSPY = derive2 { name="SPYvsSPY"; version="0.1.1"; sha256="1hxc73wwrzqh1r1xr9yd4hy4ma24virg4iv978lfyc9f9n56znp5"; depends=[]; }; + SPlit = derive2 { name="SPlit"; version="1.0"; sha256="10al2qzcxirrzdsgrjhnh7k1l9faqfbqgy50a81bjns0v3kk4m27"; depends=[Rcpp RcppArmadillo]; }; SPmlficmcm = derive2 { name="SPmlficmcm"; version="1.4"; sha256="1acs3560a7h6xx286m40abr9b7i5qihn6wni8flj0biahmsszzx6"; depends=[nleqslv]; }; - SPreFuGED = derive2 { name="SPreFuGED"; version="1.0"; sha256="1cdamkrr0xpc0l2dypd9lgjidrmalfxs0ms7z3wfmf22a8b3y0d2"; depends=[Biobase boot CMA lattice limma lme4 mvtnorm]; }; SPreg = derive2 { name="SPreg"; version="1.0"; sha256="1702i86qcbnqyi7r5wc2ciyk3l46329kmnrz91jzqq85z8cwgak1"; depends=[sn ucminf]; }; SQB = derive2 { name="SQB"; version="0.4"; sha256="12ii8xlwd2r77bj76j7l43898ras25z3plhhv106jaklhpcnk23m"; depends=[caret nnet pls rpart]; }; SQDA = derive2 { name="SQDA"; version="1.0"; sha256="0nfimk625wb64010r5r7hzr64jfwgc6rbn13wvrpn0jgayji87h6"; depends=[limma mvtnorm PDSCE]; }; SQN = derive2 { name="SQN"; version="1.0.5"; sha256="0kb8kf6g482zqdp4avwvhs3pqghfny757dbzfl1abaigmvwvx4qj"; depends=[mclust nor1mix]; }; - SQRL = derive2 { name="SQRL"; version="0.7.4"; sha256="18h3y5fcxd6sbvjiqsjrjdcq3vlgjiknhvnk2dj0ahhdb060iwhg"; depends=[RODBC]; }; - SQUAREM = derive2 { name="SQUAREM"; version="2020.5"; sha256="1f0j5pbsz2wi7dfl8h8gvdl991bjywiwkd2f6z0xgkh87kl5y0b4"; depends=[]; }; + SQRL = derive2 { name="SQRL"; version="0.8.0"; sha256="1cqx31a0w4ykgril75zkcnax3k0kif4fznxl4wyrf3mbcjr2zxxv"; depends=[RODBC]; }; + SQUAREM = derive2 { name="SQUAREM"; version="2021.1"; sha256="0n1s32l9p4vdm3h5q6g43s0qbpzry08difsh0yay80wrla6f3rb6"; depends=[]; }; SRCS = derive2 { name="SRCS"; version="1.1"; sha256="13zf3cqs53w68f9zc1fkb9ql84rvzn7g1hbykqrbvss8hjaq8x1r"; depends=[]; }; - SRS = derive2 { name="SRS"; version="0.2.1"; sha256="0yq3bjskwy23i5p7bhgnla6fbgq2a6hddm1jwi3dzm41m4rbvbn2"; depends=[DT shiny shinybusy shinycssloaders vegan]; }; + SRS = derive2 { name="SRS"; version="0.2.2"; sha256="1f94imnb12gnl2h815l080l3a1fqz7hz30277pvansyyz3ihvani"; depends=[DT shiny shinybusy shinycssloaders vegan]; }; SRTtools = derive2 { name="SRTtools"; version="1.2.0"; sha256="1203i6nqclx0faxyvhdaapmfxy8h95jj83svxriqh1hpava5s1dy"; depends=[magrittr]; }; - SSBtools = derive2 { name="SSBtools"; version="0.8.0"; sha256="06b9zkrlqzv57dp1jzl9zpf37xx85zb2mwp7s4w9nys821q4za15"; depends=[MASS Matrix stringr]; }; + SSBtools = derive2 { name="SSBtools"; version="1.1.0"; sha256="03gb86z6yjxwv3v4dkfqy7nnph1vl4sqi47i6cgyp3yk04zw1kw6"; depends=[MASS Matrix stringr]; }; + SSDL = derive2 { name="SSDL"; version="1.1"; sha256="0m05m00qsjyc69kix124z6nrplqv1yaaag7qxpiizbn664h9hmjb"; depends=[bigstatsr chickn doParallel doRNG foreach glmnet pracma Rcpp RcppArmadillo RcppParallel Rdpack reshape2 rmio]; }; SSDM = derive2 { name="SSDM"; version="0.2.8"; sha256="19l78dkjk76ababkd7xsfn0fy99khfa4i502q4vllpvch4cjz51c"; depends=[dismo e1071 earth gbm ggplot2 mgcv nnet poibin randomForest raster reshape2 rpart scales shiny shinydashboard shinyFiles sp spThin]; }; - SSDforR = derive2 { name="SSDforR"; version="1.5.20"; sha256="0qcywzvdjavzmmpawji2r5x1lrj0b7i0zyz32l1f89hq2xir53av"; depends=[MAd MASS metafor psych SingleCaseES TTR]; }; + SSDforR = derive2 { name="SSDforR"; version="1.5.21"; sha256="11xnbd9f6dci6ilwq0j4vmvnh08hqaydxqqfamin44d4cldh6rn9"; depends=[MAd MASS metafor psych SingleCaseES TTR]; }; SSHAARP = derive2 { name="SSHAARP"; version="1.0.1"; sha256="1dlfv1clkxra1mkp995zii6p3wdx5igz7i3wj9qvs1ivl27inxa9"; depends=[BIGDAWG data_table DescTools dplyr filesstrings gmt gtools sessioninfo stringr]; }; SSLASSO = derive2 { name="SSLASSO"; version="1.2-2"; sha256="0vnn9ksdf0qgjflgx1sfj6q6j9jfnarbx2222rh9kb10jy8b16jv"; depends=[]; }; - SSLR = derive2 { name="SSLR"; version="0.9.3"; sha256="15wx619sjm7yl17q32gm835j61iig8v7brwnfl2qd8bg2q86zf0r"; depends=[conclust dplyr foreach generics magrittr parsnip plyr proxy purrr RANN Rcpp RcppArmadillo rlang RSSL]; }; + SSLR = derive2 { name="SSLR"; version="0.9.3.1"; sha256="133m5rpjn3dnyhc7mwg8qzrnqn7kbljrp0aqsc6gi9rhbq3gg57k"; depends=[conclust dplyr foreach generics magrittr parsnip plyr proxy purrr RANN Rcpp RcppArmadillo rlang RSSL]; }; SSM = derive2 { name="SSM"; version="1.0.1"; sha256="1h8yyzh5rn5jay70kyzvwirfndi049a5w28qigrjv5rxd7ml84l7"; depends=[]; }; SSN = derive2 { name="SSN"; version="1.1.15"; sha256="057lh2ym82ff3c25vyh97csns4jwlbvxwc4jai0i4yplxf0ccmha"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; }; SSOSVM = derive2 { name="SSOSVM"; version="0.2.1"; sha256="11wlalpw6yhvv95xr8vvgxgl4jafc2ghzsk5wqyv71ahxarmrlss"; depends=[MASS mvtnorm Rcpp RcppArmadillo]; }; SSP = derive2 { name="SSP"; version="1.0.1"; sha256="0ccg81rsjki1fcqvj6lgmmmy5yw1gxy8khajl1i80qyi4v7ny9hk"; depends=[ggplot2 sampling vegan]; }; SSRA = derive2 { name="SSRA"; version="0.1-0"; sha256="1d0lg2dz8vf1d63366s5apm0ygrsfxivbrsij907r244zj6i1c37"; depends=[shape stringr]; }; SSRMST = derive2 { name="SSRMST"; version="0.1.1"; sha256="15s6vcmk8a27yw3rlfkajby6qkizp4sfiyi63m7hc86svd15x4wg"; depends=[survival survRM2]; }; + SSRTcalc = derive2 { name="SSRTcalc"; version="0.3.3"; sha256="0m8qc1rzx3rag69m0jvanx524d49smkgnmj99fl54frzqh0ji1ss"; depends=[]; }; SSrat = derive2 { name="SSrat"; version="1.1"; sha256="1mmwla7yqqldv0s5hqljq2k2qljdfhq97m5128gvf3iy7n2yjzgj"; depends=[plyr sna]; }; SSsimple = derive2 { name="SSsimple"; version="0.6.6"; sha256="1nhwr9kvlx899wsgzp47ykq3awp7p54zcvsdmjjh9ch4qcm9q2sm"; depends=[mvtnorm]; }; STAND = derive2 { name="STAND"; version="2.0"; sha256="07wrpmvk0jjlghvrb37xyai48vgzj0fby8y09qdxsxdlgwqg1f3s"; depends=[survival]; }; @@ -4454,21 +4609,21 @@ in with self; { STOPES = derive2 { name="STOPES"; version="0.1"; sha256="0gv58nf0m67bfqc15c7n4gksqk7h661c9b55qapk210j259b7xbv"; depends=[changepoint glmnet MASS]; }; STPGA = derive2 { name="STPGA"; version="5.2.1"; sha256="0mwjv9r7x925ljmbwk2fl0xvf2n2hnf5n5z5p5rxr57ywvirqw1b"; depends=[AlgDesign emoa scales scatterplot3d]; }; STRMPS = derive2 { name="STRMPS"; version="0.5.8"; sha256="0vlmhrna0laqzjpbg4sgnscrli3cly2lc5d69n6iqfl213zsfz78"; depends=[Biostrings dplyr IRanges purrr ShortRead stringr tibble tidyr]; }; - STV = derive2 { name="STV"; version="1.0.1"; sha256="1gzy47s4qg83fagvm19jwpbbplkvxi9qv6ac0j86i0s8v0yrlrks"; depends=[]; }; + STV = derive2 { name="STV"; version="1.0.2"; sha256="02cd78z2k08gg5kskw1m53dc2xyl9f8qhcnhvy9n90ckakw6h19h"; depends=[]; }; STraTUS = derive2 { name="STraTUS"; version="1.1.2"; sha256="0n3i7gbycp1f10058h9xlh3yk21w2izdb3xgs793mmh1i1sjy394"; depends=[ape ggplot2 ggtree gmp igraph phangorn RcppAlgos]; }; SUE = derive2 { name="SUE"; version="1.0"; sha256="0akv724s84v2zixvwywj1ydfnfvcjnaabv6gm0601nsrh6ij1mi6"; depends=[]; }; - SUMMER = derive2 { name="SUMMER"; version="1.0.0"; sha256="11c3yb61gandl3rk92n451sbwgjf9ah3vs4nmm30qldrqjb9gpna"; depends=[data_table ggplot2 ggridges maptools Matrix RColorBrewer reshape2 shadowtext sp spdep survey survival viridis]; }; - SUNGEO = derive2 { name="SUNGEO"; version="0.2.0"; sha256="1j4zsawvbzc8mmnkn8vckdhi60z2lmaf5man6iz2rdwhlflxqyxi"; depends=[cartogram data_table dplyr fasterize httr jsonlite packcircles purrr RANN raster Rcpp RCurl rlang rmapshaper sf sp spdep udunits2]; }; + SUMMER = derive2 { name="SUMMER"; version="1.1.0"; sha256="0q0xch1lzsqpvsdbiwapq2955swd391yk74bgjln9hcdzc72k8x0"; depends=[data_table ggplot2 ggridges Matrix RColorBrewer reshape2 shadowtext sp spdep survey survival viridis]; }; + SUNGEO = derive2 { name="SUNGEO"; version="0.2.22"; sha256="1drvwhmq0186k56f3zrblqvp9q52cjwqzl1bdvkg6fbs2j5bkvdh"; depends=[automap cartogram data_table dplyr fasterize httr jsonlite packcircles purrr RANN raster Rcpp RCurl rlang rmapshaper sf sp spdep udunits2]; }; SVMMaj = derive2 { name="SVMMaj"; version="0.2.9"; sha256="1405gigyjfp8by8nfx4g3rhw9x6r6g7dkpgw52jllv6n4036xa3h"; depends=[dplyr ggplot2 gridExtra kernlab reshape2 scales]; }; SVMMatch = derive2 { name="SVMMatch"; version="1.1"; sha256="1ykwrhlid4hs466xh3kv6y2qdhgk0jiglg0l3zwk5qlni6p26zc9"; depends=[Rcpp RcppArmadillo]; }; SVN = derive2 { name="SVN"; version="1.0.1"; sha256="0n93lqb1f2s2qvzc8lrcqmr0fhd57xqbi0ymrqqmll31ns679m92"; depends=[data_table igraph memoise]; }; SWIM = derive2 { name="SWIM"; version="0.2.2"; sha256="18w7rgs9i9flzayy9rvqx447wjhxqbglcjqcmajmywgajwdzbrrf"; depends=[ggplot2 Hmisc nleqslv plyr Rdpack reshape2]; }; - SWMPr = derive2 { name="SWMPr"; version="2.3.1"; sha256="1az6ss8wkdgq4l1cmfflajzs7z6w6140bclb289gb090pi69p7gy"; depends=[data_table dplyr ggmap ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; }; + SWMPr = derive2 { name="SWMPr"; version="2.4.0"; sha256="1g88w3msvargdx65ryhabkfadi09sww6gcx4aqv1y060a4wax1v1"; depends=[data_table dplyr ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; }; SWMPrExtension = derive2 { name="SWMPrExtension"; version="1.1.6"; sha256="10qai7zfs43x7i7qn1ws3xagq8hi8lx3799fpsp7ckllx1l5mk6p"; depends=[broom dplyr EnvStats flextable ggplot2 ggthemes leaflet lubridate magrittr maptools officer purrr RColorBrewer rgdal rgeos rlang scales sp SWMPr tidyr]; }; SYNCSA = derive2 { name="SYNCSA"; version="1.3.4"; sha256="0n9za302x638s666xs86zy94qch9wn0rln8xy6x9jymhhq9zn0kj"; depends=[FD permute RcppArmadillo vegan]; }; SailoR = derive2 { name="SailoR"; version="1.2"; sha256="04qrnps40845ypapf37jg1c1g05nii6iwk4fv1x5xyca963hl5ii"; depends=[]; }; Sample_Size = derive2 { name="Sample.Size"; version="1.0"; sha256="1vfnb2gg3rax4sxd81xqznfvh300nv45nn7zjsyrdjyg1n3ym7nw"; depends=[]; }; - SampleSize4ClinicalTrials = derive2 { name="SampleSize4ClinicalTrials"; version="0.2.2"; sha256="19dl5sfrsmahrf1q0ljpjmp2821mn2h9d53ds9jyci0wv287gzs9"; depends=[]; }; + SampleSize4ClinicalTrials = derive2 { name="SampleSize4ClinicalTrials"; version="0.2.3"; sha256="0s8svsgwh79rcwnskz0my2xqasyp370hn7aixqm9m6zqlvf42zc2"; depends=[]; }; SampleSizeMeans = derive2 { name="SampleSizeMeans"; version="1.1"; sha256="1wbc46n8b8wbcxl21blbzs5728dr8r0l8d3jpzbha8pcav0xrh1m"; depends=[]; }; SampleSizeProportions = derive2 { name="SampleSizeProportions"; version="1.0"; sha256="0mvkvx3nni0l8ys68sq3h2zlbjvksdcdzxqlf03k0ca5bbcmdf9l"; depends=[]; }; SamplerCompare = derive2 { name="SamplerCompare"; version="1.3.0"; sha256="1lqnkgbg1naa3crk3rakrf37vvxj6mbilbpxrv0k5iifdmh0b7k1"; depends=[mvtnorm]; }; @@ -4487,45 +4642,45 @@ in with self; { SearchTrees = derive2 { name="SearchTrees"; version="0.5.2"; sha256="11p81x1klkmxarypxpbisf78dlrmhzzg9y9hxpwz75pks1y56gqg"; depends=[]; }; SecKW = derive2 { name="SecKW"; version="0.2"; sha256="13x9l6ncx8qszkcr7dpfzrk4zqj4w8z5lwd394437vl4xf1xv0k6"; depends=[fdrtool pracma]; }; SeedCalc = derive2 { name="SeedCalc"; version="1.0.0"; sha256="1p8ncf3l2zhpbbblpjagg8cg9gf7f2izdcgc48n1aq4f7bmjbqgk"; depends=[]; }; - SeerMapper = derive2 { name="SeerMapper"; version="1.2.4"; sha256="0r9piipdzynsjb0wb3kspkssh54vi9v3p0hifl2hjwl492mxa3gw"; depends=[maptools RColorBrewer rgdal SeerMapper2010East SeerMapper2010Regs SeerMapper2010West SeerMapperEast SeerMapperRegs SeerMapperWest sp stringr]; }; - SeerMapper2010East = derive2 { name="SeerMapper2010East"; version="1.2.4"; sha256="08k9gx95lf2wr9z6yck5299jpa77f8w3194cgczjaksg24djv172"; depends=[sp]; }; - SeerMapper2010Regs = derive2 { name="SeerMapper2010Regs"; version="1.2.4"; sha256="1pz1qc2pfcs2ydv9d5m066iflgrirs9kf4k6cdh2ai61y05fah7i"; depends=[sp]; }; - SeerMapper2010West = derive2 { name="SeerMapper2010West"; version="1.2.4"; sha256="1sa4yi0jr0vid042bksmkz7z62816in71xnw6kqipa80kw7m28dh"; depends=[sp]; }; - SeerMapperEast = derive2 { name="SeerMapperEast"; version="1.2.4"; sha256="1dcwwvb9dmv1494cfj1f5532gi5gzc17k1ci4pp0xyg6cfx6cll3"; depends=[sp]; }; - SeerMapperRegs = derive2 { name="SeerMapperRegs"; version="1.2.4"; sha256="1sbf6w8z0wxjxq8q67b0s0iapn539sfsixn1km2ckkmaig7g9hbz"; depends=[sp]; }; - SeerMapperWest = derive2 { name="SeerMapperWest"; version="1.2.4"; sha256="0q6b7hw2am34hy1nj619vksiamj1r9m31cj1723vzr1wzjg42by4"; depends=[sp]; }; + SeerMapper = derive2 { name="SeerMapper"; version="1.2.5"; sha256="1sjg0a5mvyvgzwpmbr3avm76cb9a45qdwvic665v4hhhsmf2x8xk"; depends=[maptools RColorBrewer rgdal SeerMapper2010East SeerMapper2010Regs SeerMapper2010West SeerMapperEast SeerMapperRegs SeerMapperWest sp stringr]; }; + SeerMapper2010East = derive2 { name="SeerMapper2010East"; version="1.2.5"; sha256="0v3cslshg5qjmjnxw4xprdnqwdwnyamyljdyi9nwixjc2nm9inbx"; depends=[sp]; }; + SeerMapper2010Regs = derive2 { name="SeerMapper2010Regs"; version="1.2.5"; sha256="1v8vnvkmh3wqinanm5aap3vw36zriqh8xw2im2ncw0rdhf9ccbl5"; depends=[sp]; }; + SeerMapper2010West = derive2 { name="SeerMapper2010West"; version="1.2.5"; sha256="1vc1j9hh9yr69dz9fnqfh17xrad3f16kcb63sybdkg02ss5y5ppr"; depends=[sp]; }; + SeerMapperEast = derive2 { name="SeerMapperEast"; version="1.2.5"; sha256="1jfllxnqiwrnp416xmn7rzmizwj26skadpj9jvxkv70x053ijmjn"; depends=[sp]; }; + SeerMapperRegs = derive2 { name="SeerMapperRegs"; version="1.2.5"; sha256="1di7l6804gi2rsdbwb9naymqzidb8bqf62a6w32jfkl67175cg0c"; depends=[sp]; }; + SeerMapperWest = derive2 { name="SeerMapperWest"; version="1.2.5"; sha256="1v5ql5z1sv13lgmla03nzpdxzbxqw73zc3az6xf75vqb042c4wxq"; depends=[sp]; }; SegCorr = derive2 { name="SegCorr"; version="1.2"; sha256="1g4bwfs539jf7ckzjyindi3v1av7vd38yz16m7cb20qqa0a33kbj"; depends=[jointseg]; }; SegEnvIneq = derive2 { name="SegEnvIneq"; version="1.0"; sha256="1xl9q47n4vvmr9nr5yairdq9r8mgms44wh6b4l9sbar2kx9ybwj3"; depends=[OasisR outliers rgdal rgeos spdep]; }; Sejong = derive2 { name="Sejong"; version="0.01"; sha256="1d9gw42dbs74w7xi8r9bs6dhl23y16yxqzyhqqayvcm98q3l77nf"; depends=[]; }; SeleMix = derive2 { name="SeleMix"; version="1.0.2"; sha256="03q5pdgxdfx944zwpl2w7gzf23va4flbd8in3g03980smq0ai2c1"; depends=[mvtnorm]; }; Select = derive2 { name="Select"; version="1.4"; sha256="1qx4wwxxwjq31vf645xvwb0y2z5h4v6ca8fcrfpaj5kc33f333v2"; depends=[ade4 FD lattice latticeExtra Rsolnp]; }; - SelectBoost = derive2 { name="SelectBoost"; version="2.0.0"; sha256="137fxvlpc2vyn5w93ih8bm6pp198xwlbb9ky8dhxgarh0syz8g4v"; depends=[abind Cascade glmnet igraph lars msgps Rfast spls varbvs]; }; + SelectBoost = derive2 { name="SelectBoost"; version="2.2.0"; sha256="1j525phl1b2b0f4b08az8p74mcgcnmv261d0sqrii8p44474zsy4"; depends=[abind Cascade glmnet igraph lars msgps Rfast spls varbvs]; }; SelvarMix = derive2 { name="SelvarMix"; version="1.2.1"; sha256="02d16ffw5syq0d3yiim9jgrjlz99n956zxp23idpsmq6lb2whq66"; depends=[glasso Rcpp RcppArmadillo Rmixmod]; }; SemNeT = derive2 { name="SemNeT"; version="1.4.1"; sha256="1qda5867gzd10zlq934mp6hy65yfv7xfsy6c9km0f3wrvawv0vn9"; depends=[broom car dplyr effects ggplot2 igraph magrittr pbapply philentropy plyr purrr qgraph RColorBrewer scales]; }; SemNetCleaner = derive2 { name="SemNetCleaner"; version="1.3.1"; sha256="1c1fdfp2gy69d5ph7wnyi8klvyfbc87sb0jhpipfwdmnfss2nkir"; depends=[easycsv foreign R_matlab readxl rstudioapi searcher SemNetDictionaries stringdist stringi]; }; SemNetDictionaries = derive2 { name="SemNetDictionaries"; version="0.1.8"; sha256="0136mqncpqzrrs11m2w183mg7gxzgmm067gl97d7bzv3gwy2xnk4"; depends=[easycsv knitr]; }; Semblance = derive2 { name="Semblance"; version="1.1.0"; sha256="1kzrg5z3244nx9y37p092wpangni3fxpx04i5fb4dhrmav4rvgab"; depends=[DescTools fields msos PerformanceAnalytics]; }; - SemiCompRisks = derive2 { name="SemiCompRisks"; version="3.3"; sha256="06anhf0kqaz4i84g73w3l4gf0q2mwi00vlkciqfbxpwgrbacplf6"; depends=[Formula MASS survival]; }; + SemiCompRisks = derive2 { name="SemiCompRisks"; version="3.4"; sha256="0xxdb3k7d9rqq94d2x862jl67s3pkzwigwlcvrybclm6b5gb86x4"; depends=[Formula MASS survival]; }; SemiMarkov = derive2 { name="SemiMarkov"; version="1.4.6"; sha256="0nga790kcrvmbrx5asp4062711x0kjsccc246l4syiiw30b769ig"; depends=[MASS numDeriv Rsolnp]; }; SemiPar = derive2 { name="SemiPar"; version="1.0-4.2"; sha256="0pa3drpvclkw81ji5m1h5arj5c2rh03dnlff97cnnr1v5kvg1i4w"; depends=[cluster MASS nlme]; }; SenSrivastava = derive2 { name="SenSrivastava"; version="2015.6.25"; sha256="0r4p6wafnfww07kq19lfcs96ncfi0qrl8n9ncp441ri9ajwj54qk"; depends=[]; }; SensitivityCaseControl = derive2 { name="SensitivityCaseControl"; version="2.1"; sha256="00jqzqx7g0av9lw13is723gph486gb8ga0wgcmmzpmb24s5nya9z"; depends=[]; }; SensoMineR = derive2 { name="SensoMineR"; version="1.26"; sha256="0wa6wq8jnk0h5hmx03f8h8pa1g4dw0f3lxrsi93mgz740xd559yf"; depends=[AlgDesign cluster FactoMineR ggplot2 ggrepel gtools KernSmooth reshape2]; }; SensusR = derive2 { name="SensusR"; version="2.3.1"; sha256="1x1a8vnpn6h7905wa4lvf7vibkl2dsa4yyg2sg4bbi719lcki2q0"; depends=[ggmap ggplot2 jsonlite lubridate openssl plyr R_utils]; }; - SentimentAnalysis = derive2 { name="SentimentAnalysis"; version="1.3-3"; sha256="0k6sf25hqisjjc97n17vdihpblab0ywv77lfxdzwpsbcv2x6gsx9"; depends=[ggplot2 glmnet moments ngramrr qdapDictionaries spikeslab stringdist tm]; }; + SentimentAnalysis = derive2 { name="SentimentAnalysis"; version="1.3-4"; sha256="04ibqyh18rzj1rgrpw3i1zzr35rvl7z7dzbp8w1lzg9s40yf3ij1"; depends=[ggplot2 glmnet moments ngramrr qdapDictionaries spikeslab stringdist tm]; }; SeqAlloc = derive2 { name="SeqAlloc"; version="1.0"; sha256="04rhr3gb2p9i35a3x4k8m0lv42ncfqlhx6sf3bq8yihppwrag8x3"; depends=[]; }; SeqDetect = derive2 { name="SeqDetect"; version="1.0.7"; sha256="054b5v0jzk9pj9hrxk31kvcdm789lx8gzh70ivskixz57kajmiss"; depends=[dplyr eventdataR igraph Rcpp]; }; SeqFeatR = derive2 { name="SeqFeatR"; version="0.3.1"; sha256="1dvl65n60j7wl0jdb0myi9hprlr9grq6nf9m68gzxm9sz3h8lpvh"; depends=[ape Biostrings calibrate coda ggplot2 phangorn plotrix plyr qvalue R2jags scales tcltk2 widgetTools]; }; SeqKat = derive2 { name="SeqKat"; version="0.0.8"; sha256="09b5zrp41241ha5q8bxll9n12sn11hsbv46g2ld1lqsy2razivr4"; depends=[doParallel foreach Rcpp]; }; SeqMADE = derive2 { name="SeqMADE"; version="1.0"; sha256="0nf1xjhk0kpmmzgcxycg3ccxvwq6gydjq7xq6n9m7k7v35v9v3qf"; depends=[MASS]; }; - SeqNet = derive2 { name="SeqNet"; version="1.1.0"; sha256="0dbiafqgqnmws38lpa58mkzciprkan5qnrw9aivi89s065ykjd74"; depends=[fitdistrplus ggplot2 igraph mvtnorm purrr RColorBrewer Rcpp rlang tibble]; }; SequenceSpikeSlab = derive2 { name="SequenceSpikeSlab"; version="0.1.1"; sha256="079qm4klgaml99j4cshy3n54pg7q537zlagib4xd8mswdmqdvll6"; depends=[Rcpp RcppProgress selectiveInference]; }; - Sequential = derive2 { name="Sequential"; version="3.2.1"; sha256="1sjfspcq114ig221lnqcn27nqgbvlh5pdl3g0c5zl35an411jdna"; depends=[boot]; }; + Sequential = derive2 { name="Sequential"; version="3.3.1"; sha256="19rpjrgvq5igvia1jklfqxqw830r7f6ri1rg68y32mhyrb4nw29p"; depends=[boot]; }; SequentialDesign = derive2 { name="SequentialDesign"; version="1.0"; sha256="1gi37pixwbpy7358id1c75rckr352hs8vjs8sk8qgsr97pkm5xdq"; depends=[Sequential]; }; SetMethods = derive2 { name="SetMethods"; version="2.6"; sha256="1yvn5jcv83cd3z4sd7fws1j298fljzcif6037b65wy6ywrrbb73x"; depends=[admisc betareg fmsb ggplot2 ggrepel QCA scatterplot3d stargazer]; }; SetRank = derive2 { name="SetRank"; version="1.1.0"; sha256="0p7vwsw05s5hfw1mfh3fbm9nfzsymnxzrdjin7k21dx7asb618wy"; depends=[data_table igraph XML]; }; SetTest = derive2 { name="SetTest"; version="0.2.0"; sha256="08wc6cbnannmwkncqhpcw6l0y7c1v7z3awk5j7fd853nszfmpbk0"; depends=[]; }; - Seurat = derive2 { name="Seurat"; version="3.2.3"; sha256="11rzc7h2ad8z8k5r1sbz4d7y4rl3080qp2hh7vibwmipbkvlial3"; depends=[cluster cowplot fitdistrplus future future_apply ggplot2 ggrepel ggridges httr ica igraph irlba jsonlite KernSmooth leiden lmtest MASS Matrix matrixStats miniUI patchwork pbapply plotly png RANN RColorBrewer Rcpp RcppAnnoy RcppEigen RcppProgress reticulate rlang ROCR rsvd Rtsne scales scattermore sctransform shiny spatstat tibble uwot]; }; + Seurat = derive2 { name="Seurat"; version="4.0.1"; sha256="17cmp9mimvykb8ny796dn1zwmvg0pwwjw1zcixyamc5q1lwnxi3p"; depends=[cluster cowplot fitdistrplus future future_apply ggplot2 ggrepel ggridges httr ica igraph irlba jsonlite KernSmooth leiden lmtest MASS Matrix matrixStats miniUI patchwork pbapply plotly png RANN RColorBrewer Rcpp RcppAnnoy RcppEigen RcppProgress reticulate rlang ROCR Rtsne scales scattermore sctransform SeuratObject shiny spatstat_core spatstat_geom tibble uwot]; }; + SeuratObject = derive2 { name="SeuratObject"; version="4.0.0"; sha256="03k27z7g76wy7mfja2cpxq183xk0906k9gxb2j6p1zw341gv4gii"; depends=[Matrix Rcpp RcppEigen rlang sctransform]; }; ShapeChange = derive2 { name="ShapeChange"; version="1.4"; sha256="1ch7avx8mxjk8vrp17inaihmbsv968wflyk1n4fbjvacbl24vn2b"; depends=[coneproj quadprog]; }; ShapePattern = derive2 { name="ShapePattern"; version="2.1.0"; sha256="10lqapjw2vypz1rrwgr7maw79g5j7g3gfp38g88w1sxlxasmx7by"; depends=[igraph landscapemetrics raster rgdal rgeos sp]; }; ShapeRotator = derive2 { name="ShapeRotator"; version="0.1.0"; sha256="1pg2m1wh7fbchm8gp3mngfnf5g2rbhvzim1bpzqyvxqpx6ynicsa"; depends=[plot3D]; }; @@ -4535,8 +4690,8 @@ in with self; { ShiftConvolvePoibin = derive2 { name="ShiftConvolvePoibin"; version="1.0.0"; sha256="0pj3vynm8afns2kcwvmramxgbd0s2ksyyc5iha6p4dw2nz4hahc7"; depends=[]; }; ShiftShareSE = derive2 { name="ShiftShareSE"; version="1.0.1"; sha256="09sm3frapxv1zhxy84wqyaxdk5jx62ijszfa34zlknlgivividfy"; depends=[Formula]; }; ShinyImage = derive2 { name="ShinyImage"; version="0.1.0"; sha256="0nhsaq6i9lr8gqpdkahw3qr0c0cb0qwc0nqpk1ism21l6zg6ahc9"; depends=[EBImage R6 shiny shinyjs]; }; - ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.3.4"; sha256="1j8lb1x7x82wryl4qjqppx9lgbk0mwllm9mkhhi71n65yf8awgdv"; depends=[corrplot cowplot CTT data_table deltaPlotR difNLR difR dplyr DT ggdendro ggplot2 gridExtra knitr latticeExtra ltm mirt moments msm nnet plotly psych psychometric reshape2 rmarkdown rstudioapi shiny shinyBS shinydashboard shinyjs stringr VGAM xtable]; }; - ShinyQuickStarter = derive2 { name="ShinyQuickStarter"; version="1.0.2"; sha256="0zsynf0kl4ippp5qmqfaik6fh7hs010abbkii0i0dnjp5gch6qpc"; depends=[colourpicker data_table dplyr DT fs magrittr miniUI readr rlist shiny shinyalert shinycssloaders shinyFiles shinyjs shinyWidgets stringi stringr styler visNetwork]; }; + ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.3.6"; sha256="09pj2h48zppf01qlyh6rdiq7783rrdjab1288rniz81kslwy6kf4"; depends=[data_table deltaPlotR difNLR difR dplyr DT ggdendro ggplot2 gridExtra knitr latticeExtra lme4 ltm magrittr mirt msm nnet plotly psych psychometric purrr rlang rmarkdown rstudioapi scales shiny shinyBS shinydashboard shinyjs stringr tibble tidyr VGAM xtable]; }; + ShinyQuickStarter = derive2 { name="ShinyQuickStarter"; version="2.0.0"; sha256="1958g3hqaid26ig846zlcw16zprk5s61jvhrpfm5m1l0hbz2vw1j"; depends=[colourpicker data_table dplyr fs ggplot2 plotly reshape2 shiny shinyalert shinydashboard shinyFiles shinyjs shinyWidgets stringi stringr styler]; }; ShinyTester = derive2 { name="ShinyTester"; version="0.1.0"; sha256="0wm4rl2p8ggw6v2chk9b6ygh5y8p8cwzbyra0nr0qr2ka97didp8"; depends=[dplyr purrr readr stringr tidyr visNetwork]; }; ShortForm = derive2 { name="ShortForm"; version="0.4.6"; sha256="0r8flmfhm47kyzy97j3mr87srfsxwlqqsx7v0ay9qm7q2jfg6xsw"; depends=[ggplot2 lavaan stringr tidyr]; }; ShrinkCovMat = derive2 { name="ShrinkCovMat"; version="1.4.0"; sha256="0iyri3syjk9xv49d87fdyhnxg5c5x827vnak8vgckkkp62sdln2q"; depends=[Rcpp RcppArmadillo]; }; @@ -4546,16 +4701,17 @@ in with self; { SigOptR = derive2 { name="SigOptR"; version="0.0.1"; sha256="1sylchhhz6kx4r8jx95cvsmjsacjh8pin7acf2fyw2a4nlx9r1a6"; depends=[httr jsonlite]; }; SigTree = derive2 { name="SigTree"; version="1.10.6"; sha256="18gh7azjr979ijc2y4yyskj24ay697rw3j7znc5p4a63s4vpxr9w"; depends=[ape MASS phyext2 phylobase phyloseq RColorBrewer vegan]; }; SightabilityModel = derive2 { name="SightabilityModel"; version="1.4.1"; sha256="1nbz8307jspg40ldh4icsananisa396fd7p2xz13mc9lsk2pa4dc"; depends=[formula_tools Matrix msm plyr survey]; }; - Signac = derive2 { name="Signac"; version="1.1.0"; sha256="1xdcjb81vkrwkv2maqbf3m602r09id4kha0ysp5i38bnp1kfpah2"; depends=[AnnotationFilter BiocGenerics Biostrings biovizBase data_table dplyr fastmatch future future_apply GenomeInfoDb GenomicRanges ggbio ggforce ggplot2 ggrepel ggseqlogo IRanges irlba lsa Matrix patchwork pbapply Rcpp RcppRoll Rsamtools S4Vectors scales Seurat stringi tidyr]; }; + Signac = derive2 { name="Signac"; version="1.2.0"; sha256="0z0lnbnb83fhiabjb6x7xll4xa6kaf9b3dxl5palh8rnd4h2hr05"; depends=[BiocGenerics data_table dplyr fastmatch future future_apply GenomeInfoDb GenomicRanges ggforce ggplot2 ggrepel ggseqlogo IRanges irlba lsa Matrix patchwork pbapply qlcMatrix Rcpp RcppRoll Rsamtools S4Vectors scales Seurat SeuratObject stringi tidyr]; }; + SignacX = derive2 { name="SignacX"; version="2.2.0"; sha256="0851pi5z9hvvimsds3r6hhnwbr2bg559la1isbm7sb3gcv4pij04"; depends=[igraph jsonlite lme4 Matrix neuralnet pbmcapply RColorBrewer RJSONIO Seurat]; }; SignifReg = derive2 { name="SignifReg"; version="3.0"; sha256="0yvbf56ap29rfm10vdv3mc67x1aklkwwapi72vzsi2xhrgwf395d"; depends=[]; }; Sim_DiffProc = derive2 { name="Sim.DiffProc"; version="4.8"; sha256="16pzcs1g5ihza9a2glnkgd5pxi77l6w34vkn0vxcb78gc6syhbrd"; depends=[Deriv MASS]; }; Sim_PLFN = derive2 { name="Sim.PLFN"; version="1.0"; sha256="1jmsydhpfv2z9cr99hfy8cairhkkxpwk4wnz1adixwxazkn7qfah"; depends=[DISTRIB FuzzyNumbers]; }; - SimBIID = derive2 { name="SimBIID"; version="0.2.0"; sha256="1iz3paav7ayaqwifqsbb6h27pcdw0lmp6fl1nhvzbq3livvypgg7"; depends=[coda dplyr ggplot2 mvtnorm purrr RColorBrewer Rcpp RcppArmadillo RcppXPtrUtils tibble tidyr]; }; + SimBIID = derive2 { name="SimBIID"; version="0.2.1"; sha256="01gkkgxx5x9pkwsmpmf1rg4i0ls7fl6yv6pcg8gscr51bnxsrwpp"; depends=[coda dplyr ggplot2 mvtnorm purrr RColorBrewer Rcpp RcppArmadillo RcppXPtrUtils tibble tidyr]; }; SimComp = derive2 { name="SimComp"; version="3.3"; sha256="04qkis20zk0z42bv4nznffqlpwby0y0ij27gj4sa0ha864pg0hi5"; depends=[mratios multcomp mvtnorm]; }; SimCop = derive2 { name="SimCop"; version="0.7.0"; sha256="1yrdy77a9h14v92c63ng8phi2ig73wy4xjjdb75322grc0bd3jq6"; depends=[quadprog]; }; SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.7.0"; sha256="10snjwrh95407iracbc52b5cvr3sp2539rrjp7fw63q50pjl285v"; depends=[evd]; }; SimCorrMix = derive2 { name="SimCorrMix"; version="0.1.1"; sha256="1mx8xkg1nbh4x4xr6m672zyg00s3lky2sy5mz7dfkw40vz2bwi53"; depends=[BB ggplot2 MASS Matrix mvtnorm nleqslv SimMultiCorrData triangle VGAM]; }; - SimDesign = derive2 { name="SimDesign"; version="2.2"; sha256="0ssb8l6v41crrwcyid46kpwjf5j0bjk6s9m2ra072h2kc9ymgqil"; depends=[dplyr foreach pbapply plyr]; }; + SimDesign = derive2 { name="SimDesign"; version="2.3"; sha256="1513ypxf7awc2v7ci3dclj5lmfgriljrd6lvbs58xnxaz9sbmwz5"; depends=[dplyr foreach pbapply plyr]; }; SimDissolution = derive2 { name="SimDissolution"; version="0.1.0"; sha256="1rdsxykh740h22ln635m0ysm00pdw94vp7qhgify4mcvc46c3632"; depends=[alabama dplyr mvtnorm]; }; SimEUCartelLaw = derive2 { name="SimEUCartelLaw"; version="1.0.1"; sha256="1wg9sayk55mp3f2qykvfk0cbqh050vh0n1fhpq4fmlxqll87aml9"; depends=[plot3D plot3Drgl rgl]; }; SimHaz = derive2 { name="SimHaz"; version="0.1"; sha256="04q4xyc1ki1zr3grm3khfg0kbykjy3j9qpg332l7pxp4j3wa3aw3"; depends=[survival]; }; @@ -4566,41 +4722,41 @@ in with self; { SimRAD = derive2 { name="SimRAD"; version="0.96"; sha256="0ivvd3k04v1akbblxcjhlyc315z3ig7wjs0g3b37lvlfp54ppbrg"; depends=[Biostrings ShortRead zlibbioc]; }; SimRVPedigree = derive2 { name="SimRVPedigree"; version="0.4.4"; sha256="0z7wwwl814bwaijkmg9wcdj5xisiamc9yqypmk0hzj950569aj8p"; depends=[dplyr kinship2]; }; SimRVSequences = derive2 { name="SimRVSequences"; version="0.2.7"; sha256="0idrm60cqncyhdxylg1gs7gm5slvh8346s3gmf0f2dy57s0mq7ny"; depends=[dplyr intervals kinship2 magrittr Matrix reshape2 rlang SimRVPedigree]; }; - SimReg = derive2 { name="SimReg"; version="3.0"; sha256="188q399xcrvjw7y7lf3hfbb7x0m0hc4zaf9i1w2c4xzswmvljd8r"; depends=[ontologyIndex ontologyPlot ontologySimilarity Rcpp]; }; + SimReg = derive2 { name="SimReg"; version="3.3"; sha256="1liwwbi3zqrcbqx5przdlzhnq7jvyjd6yhaxalhwggzf9zv7w8ci"; depends=[ontologyIndex ontologyPlot ontologySimilarity Rcpp]; }; SimSCRPiecewise = derive2 { name="SimSCRPiecewise"; version="0.1.1"; sha256="0mhlx9m5db8a40wf275qh59345676m8bpjjmyx1v22f6m9p3b2n4"; depends=[]; }; SimSeq = derive2 { name="SimSeq"; version="1.4.0"; sha256="068gg484w07qb4wajik2s3z79xfj0jg5l4pz69267dxi5kzd9fas"; depends=[fdrtool]; }; SimSurvNMarker = derive2 { name="SimSurvNMarker"; version="0.1.1"; sha256="0jncq5q3ijczpa4h1i74035w36grjy2p8x71gx58v69ab3ca62k6"; depends=[Rcpp RcppArmadillo]; }; - SimSurvey = derive2 { name="SimSurvey"; version="0.1.2"; sha256="0wj8c67v1nzxxvskx5a9prfxxg4l2b1nqf6v4xapa1nfmmrxapik"; depends=[data_table doParallel foreach igraph magrittr plotly progress raster rgeos rlang sp]; }; + SimSurvey = derive2 { name="SimSurvey"; version="0.1.3"; sha256="0l0592ah6mqz8gyvlcnw8642dganvg4h6isv6swmgaz49pvq63pf"; depends=[data_table doParallel foreach magrittr plotly progress raster rgeos rlang sp]; }; SimTimeVar = derive2 { name="SimTimeVar"; version="1.0.0"; sha256="1x0lkgqwx1vz1gbyvy0hx20n638n30j0dny1iz5vs0cvviq3cdv8"; depends=[car corpcor ICC metafor miscTools mvtnorm plyr psych]; }; - SimVitD = derive2 { name="SimVitD"; version="0.1.2"; sha256="0ilv17ngs1y09z459yn5wlg0bql93awdy3gbmrjhv00iyp30kvjp"; depends=[poisson]; }; + SimVitD = derive2 { name="SimVitD"; version="1.0"; sha256="1mbvn8s557wmdsdr0q6pdvmzma2yd0mi7x01kdwpym6n2sh7szjc"; depends=[wBoot]; }; SimilaR = derive2 { name="SimilaR"; version="1.0.8"; sha256="1wlxscl94r3gxwsc9yw0y4z5nj28nxilijp0pbzv4z2n4aqc7vy6"; depends=[BH Rcpp stringi]; }; SimilarityMeasures = derive2 { name="SimilarityMeasures"; version="1.4"; sha256="1w4klcln4hy9vcik9csg7b3b8kk4raxgckwfrhqg089d80xbqsxj"; depends=[]; }; Simile = derive2 { name="Simile"; version="1.3.3"; sha256="1izyjp18m1inac3svkf59z3lddrv44m7pdkhisgkr987xs8gdch4"; depends=[]; }; SimpleTable = derive2 { name="SimpleTable"; version="0.1-2"; sha256="1rkybrp7zlb7cj37799npss1ldic0yf519q5l7a6ikal4yl1afyb"; depends=[hdrcde locfit MCMCpack]; }; - SimplicialCubature = derive2 { name="SimplicialCubature"; version="1.2"; sha256="1g7i31naczqf1hxmk1h5y9gq36rdfhf4al9xvwjgi9bj9zhfg3qp"; depends=[]; }; + SimplicialCubature = derive2 { name="SimplicialCubature"; version="1.3"; sha256="06dpbawn650lzybd5j4xkygbg5s2nqfz6b4g0skm4z7lsb2d9dhb"; depends=[]; }; SimplifyStats = derive2 { name="SimplifyStats"; version="2.0.4"; sha256="08775g6fdx09y8pkfq4k8zxbxpwah7yqq5cg30lmxl7zrpmza5hv"; depends=[assertthat broom dplyr moments tibble]; }; Simpsons = derive2 { name="Simpsons"; version="0.1.0"; sha256="1pm6wga1yxc35zgz72plzq23d3l4bbzfdvhszdxmkn1pkk64h8ms"; depends=[mclust]; }; SinIW = derive2 { name="SinIW"; version="0.2"; sha256="1z7rcjy0i09a9hjpjj1x8i46lv042l20lvb6b0pnsky2sx3v78pd"; depends=[fdrtool pracma]; }; - SingleCaseES = derive2 { name="SingleCaseES"; version="0.4.3"; sha256="05bd03ka6qxmq8ls9w0nfklya3qay90s3i0iqjpcd6id4g8cz2kb"; depends=[dplyr magrittr purrr rlang tidyr tidyselect]; }; + SingleCaseES = derive2 { name="SingleCaseES"; version="0.4.4"; sha256="1srp9cc6s0ff92gdcarjqsl3pq492icv1q2l52x78ah3xzkmsvx3"; depends=[dplyr magrittr purrr rlang tidyr tidyselect]; }; SiteAdapt = derive2 { name="SiteAdapt"; version="1.1.0"; sha256="1k79j29d92a8m578xj61iavljikksdmjr2vlzwmdvxpa6rp1i2ff"; depends=[ggplot2 ggpubr glmulti hydroGOF hyfo RColorBrewer solaR]; }; SitesInterest = derive2 { name="SitesInterest"; version="1.0"; sha256="06l6i6jnzwj683cvd9a9dg4nlb1wy1v3wb561y97a25bikm3mfy6"; depends=[plotrix]; }; SixSigma = derive2 { name="SixSigma"; version="0.9-52"; sha256="07s4an2az2pgqhq9c08jrf6b95nrs1b3r1092d53n1ps8wbdmbln"; depends=[e1071 ggplot2 lattice nortest qcc reshape2 scales testthat xtable]; }; SizeEstimation = derive2 { name="SizeEstimation"; version="1.1.1"; sha256="1rz57y76hzp880511kzm7nhxf201n0dr7ccip6slrjz784dl7s27"; depends=[MCMCpack msm]; }; SkewHyperbolic = derive2 { name="SkewHyperbolic"; version="0.4-0"; sha256="1blxibjrgb738q2ybavp4q3d6yn7hayhg851ysghp118wpl32nwr"; depends=[DistributionUtils GeneralizedHyperbolic]; }; + SkeweDF = derive2 { name="SkeweDF"; version="0.1.0"; sha256="11i6zbjhkcrr6g848sms21l1ixk401vd50cia74j78d4nvl8d8zc"; depends=[dplyr matrixStats optimr purrr Rcpp stringr zipfR]; }; Skillings_Mack = derive2 { name="Skillings.Mack"; version="1.10"; sha256="0zxqiw87avw2rb2acj7mvpyfkf7iwnkshg73ib74y5ml9awmg2mw"; depends=[MASS matrixcalc]; }; Sky = derive2 { name="Sky"; version="1.0"; sha256="02vjdggvanzsjx7ihxskapp5d5dlyalj02122wmarj8qf1ha1i2m"; depends=[EBImage]; }; SlaPMEG = derive2 { name="SlaPMEG"; version="1.0.0"; sha256="1snjcm9rqlgx41kphj0nadlny3yxpdczkvjisk4vp49fp381j4z7"; depends=[ggplot2 globaltest lcmm lme4 magic mvtnorm reshape2]; }; - SleepCycles = derive2 { name="SleepCycles"; version="1.0.1"; sha256="0kcggihymq726g4p4y3giq0bvc4fvqf19gmh6y8dbxmqlaphj5qp"; depends=[devtools ggplot2 plyr reshape2 stringr viridis]; }; + SleepCycles = derive2 { name="SleepCycles"; version="1.1.2"; sha256="1scqfpzplwya9932l469s5bwfmnayyzbynlmq2mcyj1jk82dmm95"; depends=[devtools ggplot2 plyr reshape2 stringr viridis]; }; Sleuth2 = derive2 { name="Sleuth2"; version="2.0-5"; sha256="18rp23dr55p2zqxqj5i86gi8j25b0y7hc2p88rxqszgmbyn5ynhi"; depends=[]; }; Sleuth3 = derive2 { name="Sleuth3"; version="1.0-3"; sha256="0ngwri80cwqs50wjza8qyzzwign4ag1ck7fa1x7q5x08w9x6w08m"; depends=[]; }; - SlidingWindows = derive2 { name="SlidingWindows"; version="0.1.7"; sha256="1anrmjk0nmhdvq0gnpspdv5xx9sk406g2vjh8qiqhkaglaa9hpw3"; depends=[DCCA nonlinearTseries PerformanceAnalytics TSEntropies]; }; + SlidingWindows = derive2 { name="SlidingWindows"; version="0.2.0"; sha256="0hvxg4hrk3rb1wxhi71rgamxd8wcwys569137znfs0y8j6yvf0jj"; depends=[DCCA nonlinearTseries PerformanceAnalytics TSEntropies]; }; SmCCNet = derive2 { name="SmCCNet"; version="0.99.0"; sha256="0ixvh1pd1gzbscwg4xjlcgxq5c9vqahil0fysfjc3fnba3wiidzx"; depends=[igraph Matrix pbapply PMA]; }; - SmallCountRounding = derive2 { name="SmallCountRounding"; version="0.6.0"; sha256="0ghahp0xc3q3w9b3r5hswrmsj88c12wpkgvw39yycrifrpg1syq7"; depends=[Matrix SSBtools]; }; - SmartEDA = derive2 { name="SmartEDA"; version="0.3.6"; sha256="15pry1p82kpyd0w4c9p84bm0812lzblfdpzsr46m221hfhr3spqh"; depends=[data_table GGally ggplot2 gridExtra ISLR rmarkdown sampling scales]; }; + SmallCountRounding = derive2 { name="SmallCountRounding"; version="0.8.0"; sha256="10acyw5dhifh4ksyd1fwny3if4j75y1wk1fm52hjpg30ja0rkyxh"; depends=[Matrix SSBtools]; }; + SmartEDA = derive2 { name="SmartEDA"; version="0.3.7"; sha256="0gfwnvdp4aarhsman967dss5vyckxqsh4aln0d9b73g4nb235zwq"; depends=[data_table GGally ggplot2 gridExtra ISLR qpdf rmarkdown sampling scales]; }; SmartMeterAnalytics = derive2 { name="SmartMeterAnalytics"; version="1.0.3"; sha256="0i8my7ngzdbay3cld8axhvbri0nh0dd1dmv2lbsgyx4adr5hb30f"; depends=[FNN futile_logger plyr stinepack zoo]; }; SmartSVA = derive2 { name="SmartSVA"; version="0.1.3"; sha256="10a8s2znsg8ywqkq9fsxiyqfsprrx33pqissazp2vmabs11mg4np"; depends=[isva Rcpp RcppEigen RSpectra sva]; }; - SmartSifter = derive2 { name="SmartSifter"; version="0.1.0"; sha256="16rzma87k27qg6qy39mzywdj8pzkp7r9q7bpqyikazp3fk2nmfri"; depends=[mvtnorm rootSolve]; }; - SmarterPoland = derive2 { name="SmarterPoland"; version="1.7"; sha256="03vs6hcd96va9kfhl2yq77alnm33j1dxy79kgrx17hlijsy65qqv"; depends=[ggplot2 htmltools httr jsonlite rjson]; }; + SmarterPoland = derive2 { name="SmarterPoland"; version="1.8"; sha256="19pxr1zch2bm5jw676dp0p2crvmdmvzyxz07vhx926axpb4i0xbp"; depends=[ggplot2 htmltools httr jsonlite rjson]; }; SmithWilsonYieldCurve = derive2 { name="SmithWilsonYieldCurve"; version="1.0.1"; sha256="0qvhd1dn2wm9gzyp6k7iq057xqpkngkb4cfmvmjqmf0vhysp371w"; depends=[]; }; SmoothHazard = derive2 { name="SmoothHazard"; version="1.4.1"; sha256="147wjxgxnijpmixrfyl8kd4scz2w1xb8dcwvpr60zg32nv22g17r"; depends=[lava mvtnorm prodlim]; }; SmoothWin = derive2 { name="SmoothWin"; version="3.0.0"; sha256="0zq2sq0w4rs3hrra24wgbbzv88d1hx6m8q8gmc5h6nbs1172hs66"; depends=[nlme Rfast]; }; @@ -4614,27 +4770,28 @@ in with self; { Sofi = derive2 { name="Sofi"; version="0.16.4.8"; sha256="0h9ir0xrwmsabfhwsr9hbpwabh1fsb3p51y8qcgm92iyvc6dl3mf"; depends=[foreign sampling shiny]; }; SoftClustering = derive2 { name="SoftClustering"; version="1.1902.2"; sha256="1r709r96ra9knkprjw6c227r7w6wygfpwc9pwwsjyw166305pxfs"; depends=[]; }; SoftRandomForest = derive2 { name="SoftRandomForest"; version="0.1.0"; sha256="1k439hcp53yg6f2x4bgafsri4jjgpva97dphzsdk5icfs5d38bh8"; depends=[boot]; }; - SoilHyP = derive2 { name="SoilHyP"; version="0.1.4"; sha256="1na2i60646893s4ci0rlwaldlkgdbm2w4y0x1byhl2x6aryfcprp"; depends=[data_table lubridate]; }; + SoilHyP = derive2 { name="SoilHyP"; version="0.1.5"; sha256="0mpsy1fzy33vhb1la2y87c95bhc0ci4jfwzbsd47jz1s3pw6vzrl"; depends=[data_table lubridate]; }; SoilR = derive2 { name="SoilR"; version="1.1-23"; sha256="1cryypgnbck5hvkc2izrd8r10q2b97f2p1s46x4dk8p099gck5wg"; depends=[deSolve RUnit]; }; - Sojourn = derive2 { name="Sojourn"; version="0.1.0"; sha256="16y17byrrqq8cms1dk7r1x0kl5f6571813mh8072ny6r17bzrqwv"; depends=[AGread caret dplyr lubridate magrittr nnet rlang svDialogs zoo]; }; - Sojourn_Data = derive2 { name="Sojourn.Data"; version="0.1.0"; sha256="1iz37sb0kbdc5f8ikspy2rf6277x53ma0yq6pjqapklpccbg4ghg"; depends=[caret nnet]; }; + SoilTaxonomy = derive2 { name="SoilTaxonomy"; version="0.1.3"; sha256="18d3aslr1i00s1qmm40jxjgy32czs2hf6lvl8cy13lak7f795n6y"; depends=[stringr]; }; + Sojourn = derive2 { name="Sojourn"; version="1.0.2"; sha256="0y9mcz0ysdjw16aflf6xa8w7ib5lx7mzcd485xfzyhsacwz864zi"; depends=[dplyr lubridate magrittr nnet PAutilities Rcpp rlang svDialogs zoo]; }; + Sojourn_Data = derive2 { name="Sojourn.Data"; version="0.3.0"; sha256="1flxiga9szhifndrhmf4blgms477gnnf4gd6wkxqgv3vgisc4q4i"; depends=[]; }; SolveRationalMatrixEquation = derive2 { name="SolveRationalMatrixEquation"; version="0.1.0"; sha256="1m0b4sb247k6mlagvs4nj42ga9p48g9736lmhar7v1c5qhi7pw3v"; depends=[]; }; + SolveSAPHE = derive2 { name="SolveSAPHE"; version="2.1.0"; sha256="1r42h19l186jry2wxmrp9y1jdcwr7wx4an3nmryc4l33f48idbfr"; depends=[]; }; SongEvo = derive2 { name="SongEvo"; version="1.0.0"; sha256="0mc5wlf5axbflys6g8b7xg0di3wwkli7q0a9fby6598fq9hbaqpd"; depends=[boot geosphere lattice sp]; }; SorptionAnalysis = derive2 { name="SorptionAnalysis"; version="0.1.0"; sha256="0drns1ajcga5z56hcgjxld1riwjn7vli8k1ma1xqifpy1qwy7ci6"; depends=[]; }; SortableHTMLTables = derive2 { name="SortableHTMLTables"; version="0.1-3"; sha256="1jgrqsm0cj8qlk0s4qn3b83w96mgpp5gmhgcg9q2glc72v8c4ljh"; depends=[brew testthat]; }; - SortedEffects = derive2 { name="SortedEffects"; version="1.2.0"; sha256="0p16kxzss0inzvsd23sh7yiry1znpzdl36wf9dzhb9w7y9js8nxr"; depends=[boot dummies Hmisc pbapply quantreg rlist SparseM]; }; - SoundShape = derive2 { name="SoundShape"; version="1.0"; sha256="1rpw1irp049r44w23giz33xblq16vgpb293byha4aaffsahbw2rx"; depends=[abind geomorph plot3D reshape2 seewave tuneR]; }; + SortedEffects = derive2 { name="SortedEffects"; version="1.3.0"; sha256="0fmdkl1wyfrn0njkvjqsr4xfp8shzi89vw7vk2i5mrq9ifjxgj58"; depends=[boot dummies Hmisc pbapply quantreg rlist SparseM]; }; + SoundShape = derive2 { name="SoundShape"; version="1.1.0"; sha256="0nv04r4anl3mpmdv2bhzpk5fp939pczz606648x9v414ymaa4q89"; depends=[abind geomorph plot3D reshape2 seewave tuneR]; }; SoundexBR = derive2 { name="SoundexBR"; version="1.2"; sha256="0chc332v3wcz30v70yvdxhvcfdmvf4fj193cn00gl899xfxal89p"; depends=[]; }; - SoupX = derive2 { name="SoupX"; version="1.4.8"; sha256="0lyqhzljx2vffcxif6apsh3nsiqjv02w3cv4xmbjxjjv7bmnccdc"; depends=[ggplot2 Matrix Seurat]; }; SourceSet = derive2 { name="SourceSet"; version="0.1.3"; sha256="159kg4pna24yihkghxc2k5f56dqk8aypxcmj1whgnajmgab29ry1"; depends=[graph gRbase gtools igraph plyr progress reshape2 scales]; }; - SoyNAM = derive2 { name="SoyNAM"; version="1.6"; sha256="1vwl2mknk6x0sgk0baxsvb6xy4i7mf2ypkmc9lx869nakrx1ypah"; depends=[lme4 NAM reshape2]; }; - SpATS = derive2 { name="SpATS"; version="1.0-11"; sha256="00xw6xz764sqlfr7pw2mxzxvm4i1p76n9h8wz62n0p3afn1d1glm"; depends=[data_table fields plot3Drgl spam]; }; + SoyNAM = derive2 { name="SoyNAM"; version="1.6.1"; sha256="1dgphlryw1810v93aq80p2c92aq6ccc25kabkgw4h1xinrpn263i"; depends=[lme4 NAM reshape2]; }; + SpATS = derive2 { name="SpATS"; version="1.0-12"; sha256="1lxaip002lg22y1x9d696f481nlx79p90wjzz3iipgzd6c6bvvsf"; depends=[data_table fields plot3Drgl spam]; }; SpNMF = derive2 { name="SpNMF"; version="0.1.1"; sha256="1xybxx47i3ww5d7chwl38xc48fbsclgyxcki8h85c6dkm49dxy8i"; depends=[NMF]; }; - SpNetPrep = derive2 { name="SpNetPrep"; version="1.1"; sha256="1y3j7mwjxv69lrgqvi8kxvhlmdyr8v7gbg17741008xb32kgma8h"; depends=[leaflet maptools prodlim raster rgdal shiny shinythemes sp spatstat]; }; + SpNetPrep = derive2 { name="SpNetPrep"; version="1.2"; sha256="1jhjyrb0k5z21vn9bc444rxax3lxsyzyhggrcy7zl9ps7p4ra990"; depends=[leaflet maptools prodlim raster rgdal shiny shinythemes sp spatstat spatstat_core spatstat_geom spatstat_linnet]; }; SpaCCr = derive2 { name="SpaCCr"; version="0.1.0"; sha256="0qm1fr6nnax3i1i77fi73x1z8db557avh6kivs0nskb1dfj8ri4m"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo tidyr]; }; - SpaDES = derive2 { name="SpaDES"; version="2.0.4"; sha256="1ihxkr2c7rfpb02chmdv393nfc1id1cg7lq8pbb64xm5vdpyj0bv"; depends=[quickPlot reproducible SpaDES_addins SpaDES_core SpaDES_tools]; }; + SpaDES = derive2 { name="SpaDES"; version="2.0.6"; sha256="18z5xlh0frdli4sfrhicdhnzj027phwlk2df9sqbwyn66wbrv98g"; depends=[quickPlot reproducible SpaDES_addins SpaDES_core SpaDES_tools]; }; SpaDES_addins = derive2 { name="SpaDES.addins"; version="0.1.2"; sha256="0z1n48kfwy460zfam88ayfiq8sbzvnf6cpkasr74nykr4fabs5ha"; depends=[devtools magrittr miniUI reproducible rstudioapi shiny SpaDES_core stringi]; }; - SpaDES_core = derive2 { name="SpaDES.core"; version="1.0.3"; sha256="17wgnasy76braiz070fhn9w7la1x0gbgfa6flbr1rr14jvfpnh2d"; depends=[backports crayon data_table dplyr fastdigest fpCompare igraph lubridate qs quickPlot R_utils raster reproducible Require rlang whisker]; }; + SpaDES_core = derive2 { name="SpaDES.core"; version="1.0.6"; sha256="0qkqfn57nja7rj5abxav5hhrfjxvxalsiymmi6lnmm6dgy83h76y"; depends=[crayon data_table fastdigest igraph qs quickPlot raster reproducible Require whisker]; }; SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.3.6"; sha256="1rfkdm0dnylpvmsv59vkwxlyq61znrskf43qpr3p8kl7jbkqw7v6"; depends=[backports checkmate CircStats data_table fastmatch fpCompare magrittr quickPlot raster Rcpp reproducible rgeos sp]; }; SpaTimeClus = derive2 { name="SpaTimeClus"; version="1.0.1"; sha256="0w2jxaz2kxfksyss5vy6xy499p8jg8lpqlykwgm2srp1fd2l3rs9"; depends=[Rcpp RcppArmadillo]; }; SpadeR = derive2 { name="SpadeR"; version="0.1.1"; sha256="0iy2rkq4vvps1a73kqq37zpsyl4pvl3vh07dwvpfhvp7f8nxbx99"; depends=[]; }; @@ -4643,11 +4800,11 @@ in with self; { SparseFactorAnalysis = derive2 { name="SparseFactorAnalysis"; version="1.0"; sha256="0lgfvydxb86r5hks1mf0p0yhgpx8s8fbkc3q6dimc728rw26qcv5"; depends=[directlabels ggplot2 MASS proto Rcpp RcppArmadillo truncnorm VGAM]; }; SparseGrid = derive2 { name="SparseGrid"; version="0.8.2"; sha256="057xbj2bhjm9i32kn39iscnqqdsvsmq0b8c92l8hnf9avf1sx10x"; depends=[]; }; SparseLPM = derive2 { name="SparseLPM"; version="1.0"; sha256="1mpjf7yk2haa8hch315davb6nrhxhy0w2vgw2x4111rn4bskhd8m"; depends=[gtools Rcpp RcppArmadillo vegan]; }; - SparseM = derive2 { name="SparseM"; version="1.78"; sha256="0cmlm0lps3daalvp5jzjnjfys388hgkyc8yw0g5r2351h749xdyn"; depends=[]; }; + SparseM = derive2 { name="SparseM"; version="1.81"; sha256="0csbqd9wm6r4162mday1iaigzf9wv2rp1zq8hnihys6f38w8z0xx"; depends=[]; }; SparseMDC = derive2 { name="SparseMDC"; version="0.99.5"; sha256="0d3ashk3l9fjdbiyjhaxc05ayyscissrg7lwhnh46hv3fydbixlj"; depends=[doParallel doRNG foreach]; }; SparseMSE = derive2 { name="SparseMSE"; version="2.0.1"; sha256="1alpvj0ya3r64wwfdzz2aaxgaf6512glzl65p97606c2fwrm6db7"; depends=[lpSolve Rcapture]; }; - SpatEntropy = derive2 { name="SpatEntropy"; version="0.1.0"; sha256="0nk399anjhsdki9cra650ynk6sa0366495470sawxcfs3vxmlzrl"; depends=[spatstat]; }; - SpatPCA = derive2 { name="SpatPCA"; version="1.2.0.1"; sha256="0vqajxcjjdp9dv53w0s4d1z63yrnzvs90h7cqs0f6daaihyvm130"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + SparseTSCGM = derive2 { name="SparseTSCGM"; version="4.0"; sha256="01lfb3j907244hgapb85kba7zdmgzhw452gri208qgrjzfv2x9yh"; depends=[abind glasso huge longitudinal MASS mvtnorm network]; }; + SpatEntropy = derive2 { name="SpatEntropy"; version="2.0-1"; sha256="1hr81babgml8mikpfkzk99xhpmxg36dxi9m7f22p23mhvg1xmn5i"; depends=[spatstat spatstat_core spatstat_geom spatstat_linnet]; }; SpatialAcc = derive2 { name="SpatialAcc"; version="0.1-4"; sha256="09rkzfzg6nh4n7dizkqrz651kp617l2557c9qpxacspl3ngbm82i"; depends=[sp]; }; SpatialBSS = derive2 { name="SpatialBSS"; version="0.9-0"; sha256="0id5mi8j80kn3s42ibbbsk4m76b48ir1h66y7ds5jck0xl4fndx2"; depends=[JADE Rcpp RcppArmadillo sp]; }; SpatialBall = derive2 { name="SpatialBall"; version="0.1.0"; sha256="09iy1smfqnb0rd2s9a1wqgscb1plwcwwph6a8215l4zrs6svszv2"; depends=[dplyr ggplot2 hexbin lubridate RColorBrewer]; }; @@ -4665,7 +4822,7 @@ in with self; { SpatialRoMLE = derive2 { name="SpatialRoMLE"; version="0.1.0"; sha256="1m80vcd27g11v0gxnjz6p4ghljpxdb8jpkns8ry5yzhfvcpf29jc"; depends=[]; }; SpatialTools = derive2 { name="SpatialTools"; version="1.0.4"; sha256="0jgbrzsx2klvihv65y1ycqyr8awp5kqqz4qwfyfibx3b56lzna1q"; depends=[Rcpp RcppArmadillo spBayes]; }; SpatialVS = derive2 { name="SpatialVS"; version="1.1"; sha256="1xghfiz9wmmx11ssms7zjy3ggkjmc6kkbdwp3v5wjwpwapafzdk3"; depends=[fields MASS nlme]; }; - SpatialVx = derive2 { name="SpatialVx"; version="0.7-1"; sha256="0xbbfz92h168lag1h7hwnb86fb30jccxhabcdi8x0kcpcn721x69"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat turboEM waveslim]; }; + SpatialVx = derive2 { name="SpatialVx"; version="0.8"; sha256="10l1f9cs5h2sy8i5wy96vwh0ypwkx9xzidlg96qc3qg1ww7dlsiw"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat spatstat_core spatstat_geom spatstat_linnet turboEM waveslim]; }; Spbsampling = derive2 { name="Spbsampling"; version="1.3.4"; sha256="1rsgrfhipx743qdcpii727hxwg9wqcavy67z5b3kwawss8gf8arc"; depends=[Rcpp RcppArmadillo]; }; SpecDetec = derive2 { name="SpecDetec"; version="1.0.0"; sha256="1940pl4vm1kzszq0hwhqkwbk1xmrimjdf03acpdndy089mdg9avc"; depends=[abind]; }; SpecHelpers = derive2 { name="SpecHelpers"; version="0.2.7"; sha256="1v3v717ah2fkx9225860dwppdf5m6nnnaaa4iwmj30rn17nqr4jh"; depends=[gsubfn splancs]; }; @@ -4673,16 +4830,19 @@ in with self; { SpectralMap = derive2 { name="SpectralMap"; version="1.0"; sha256="15689023k9jzg3s7bx5m97dmn00z876amqhxsxksy8n8wf09wr57"; depends=[fields scatterplot3d]; }; Spectrum = derive2 { name="Spectrum"; version="1.1"; sha256="0n38d360azkck6vvhr771zsh0gbvd9qsf9ygg5r18vhz0pb1xcfw"; depends=[ClusterR diptest ggplot2 Rfast]; }; SphereOptimize = derive2 { name="SphereOptimize"; version="0.1.1"; sha256="1b01jpj0sagi3hwfvgd346wvrcypv5b3hh0xfdd8qqnwjgkq8ixi"; depends=[]; }; - SphericalCubature = derive2 { name="SphericalCubature"; version="1.4"; sha256="14xrxhmhavz82rcixnyharnbrvdzs6rh7gbxihaxh431d90w2q3k"; depends=[abind cubature mvmesh SimplicialCubature]; }; + SphericalCubature = derive2 { name="SphericalCubature"; version="1.5"; sha256="03j9f9v3zrykrd4lc74i19s3xyc0z3l2kg3056qg591sxw64h7vh"; depends=[abind cubature mvmesh SimplicialCubature]; }; SphericalK = derive2 { name="SphericalK"; version="1.2"; sha256="18py4ylm10s75pihjvcy7w948379zy9l9azriw7g7pyp7px29wda"; depends=[]; }; Spillover = derive2 { name="Spillover"; version="0.1"; sha256="18vk1njd7bzrfic4s1kmnbafcjyrr7wv2lbnifmsafd5qphbx87x"; depends=[fastSOM vars zoo]; }; + Splinets = derive2 { name="Splinets"; version="1.0.0"; sha256="1fws9svxvn03xgfqmqwr169wgl544zv87yrdi4nl5z32cq5c9yk5"; depends=[]; }; + SplitGLM = derive2 { name="SplitGLM"; version="1.0.2"; sha256="0708jz8j44lw6zs5f6w4v9pf7apd22j15g7lszc8kwlm8xsnnkf6"; depends=[Rcpp RcppArmadillo]; }; SplitReg = derive2 { name="SplitReg"; version="1.0.2"; sha256="1s012qldrsq8rpfpzf7kyd7631b65zai269x53xcaqn75r5ssh3f"; depends=[Rcpp RcppArmadillo]; }; SplitSoftening = derive2 { name="SplitSoftening"; version="2.0-1"; sha256="0jk46ymgkjh8jg9b9zzn9490cq92fzchvi2yzqiwisww0k15xlvb"; depends=[]; }; SportsAnalytics = derive2 { name="SportsAnalytics"; version="0.2"; sha256="1vb080ak1mfvr6d0q9i3r8hd547ba80bavjdcri0gclqqcjf1ach"; depends=[]; }; SpotSampling = derive2 { name="SpotSampling"; version="0.1.0"; sha256="0s47dvigzkcl9ynrdiwrjzwap18dpkb29jngi8ddvf9m4xywj4al"; depends=[BalancedSampling MASS pracma sampling WaveSampling]; }; - SqlRender = derive2 { name="SqlRender"; version="1.6.8"; sha256="10v2p5law5nqf2bychrbq28albxn9f1aic7cb9lj9pk12w03rpp0"; depends=[rJava]; }; + SqlRender = derive2 { name="SqlRender"; version="1.7.0"; sha256="1c6aac32xdn6y64h2v1wzsfhrcyz94by40pz6cjl5wj1r6vxx6yh"; depends=[rJava rlang]; }; + Sshaped = derive2 { name="Sshaped"; version="0.99"; sha256="1lj6dmawviqwf5k1ns93n7n8rzg6sjvpb73mcqam0cz1vhv8m9qk"; depends=[Rcpp RcppArmadillo]; }; Sstack = derive2 { name="Sstack"; version="1.0.1"; sha256="137vsas2kw3l37c141g51sgx0j6z8ys6hbxjmsdymz1fxsjr4adg"; depends=[doParallel dplyr foreach randomForest]; }; - StAMPP = derive2 { name="StAMPP"; version="1.6.1"; sha256="1x6b032xadjn8yq3n662r9f0lyg5xl71q2lksvx8rn5fmpjlqqrs"; depends=[adegenet doParallel foreach pegas]; }; + StAMPP = derive2 { name="StAMPP"; version="1.6.2"; sha256="0mya2awp9invm0qiyvjr6g0h7gqwlmgkhrcpw0c6xfli0jvm1fs5"; depends=[adegenet doParallel foreach pegas]; }; StMoMo = derive2 { name="StMoMo"; version="0.4.1"; sha256="1c4v2gjipq1y4crc6bqvz2x5c02bl10mh9jacg8dqb2dffsh5y44"; depends=[fanplot fields forecast gnm MASS RColorBrewer reshape2 rootSolve]; }; StMoSim = derive2 { name="StMoSim"; version="3.1.1"; sha256="1y4lnbpgdza6r6w3q161nlmg8775g3zv323amcwxcj41r4v41p96"; depends=[Rcpp RcppParallel]; }; StVAR = derive2 { name="StVAR"; version="1.1"; sha256="0wz5f5i9927fs1s8yczwqs022k912220m28l1sv5f0r081iv656i"; depends=[ADGofTest matlab MCMCpack numDeriv]; }; @@ -4703,19 +4863,21 @@ in with self; { SteinerNet = derive2 { name="SteinerNet"; version="3.1.0"; sha256="03wr746dkwp8vg91y986q0xvgz1y9b5q25g0kig2sx6m75li3yif"; depends=[igraph]; }; Stem = derive2 { name="Stem"; version="1.0"; sha256="1fr02mi5qyxbqavdh2hg8ggw4nfjh3vs7g0vh834h6y0v53l71r5"; depends=[MASS mvtnorm]; }; StempCens = derive2 { name="StempCens"; version="1.1.0"; sha256="0jphyikfggx0yj5f5k3fykf3fdv9msppymzpyin1m7xfmfi5cwia"; depends=[distances ggplot2 MCMCglmm mvtnorm Rcpp RcppArmadillo Rdpack tmvtnorm]; }; - StepReg = derive2 { name="StepReg"; version="1.4.1"; sha256="1ash73v9qwy1717w00vajamkd4rb8rsaxch7y9479yqagclfbl18"; depends=[Rcpp RcppEigen]; }; + StepReg = derive2 { name="StepReg"; version="1.4.2"; sha256="0phabq5miri0zbbnmgb06k21z0kjrv9n88vfnaj4d0js7b973r9j"; depends=[Rcpp RcppEigen]; }; StepSignalMargiLike = derive2 { name="StepSignalMargiLike"; version="2.6.0"; sha256="0j85lvs2bljfhf482r31sq3xgk8l73hcw22wgxxp8z8nla38cwf9"; depends=[Rcpp]; }; + SteppedPower = derive2 { name="SteppedPower"; version="0.1.0"; sha256="186nl1h7ib7dhfghxvq0nr7sbca3423wlna4ibn32l7i13bqydlh"; depends=[Matrix plotly]; }; StepwiseTest = derive2 { name="StepwiseTest"; version="1.0"; sha256="1fdm4s9l6grgd45r98ybbsh40rnmnn16c0id6lv28cpmssi0iphi"; depends=[Rcpp RcppArmadillo]; }; StereoMorph = derive2 { name="StereoMorph"; version="1.6.3"; sha256="0sr8i6hq9iir2f717yvm5kdda047hamsqcrl553jjzzcbxg0y5m1"; depends=[bezier jpeg MASS png Rcpp rjson shiny svgViewR tiff]; }; Storm = derive2 { name="Storm"; version="1.2"; sha256="1fg8y9my9yp6px1gh43mr3m2s2z262mzq03pj52mqg3n186vk8z3"; depends=[permute rjson]; }; StrainRanking = derive2 { name="StrainRanking"; version="1.2"; sha256="1r8avm9xajqmsy4x7pgh1yaffq7wl5i5kg75kdilydwmii6n19i0"; depends=[]; }; StratSel = derive2 { name="StratSel"; version="1.3"; sha256="0hd6q8s8aiymcd33kv0gd0a4wzr86xxdzwn18jgpyk9q8pmg8gvl"; depends=[Formula MASS memisc mnormt pbivnorm]; }; Strategy = derive2 { name="Strategy"; version="1.0.1"; sha256="0phja1r0qfvcswvw5w1x6ny86p84wkqb029fdqgw10djdm9xp0f2"; depends=[xts zoo]; }; - StrathE2E2 = derive2 { name="StrathE2E2"; version="3.2.0"; sha256="0yzlnjnczndd06r2s90hs0fnm3rrb0avw0q5mhhsfjglix5p2km3"; depends=[deSolve NetIndices]; }; + StrathE2E2 = derive2 { name="StrathE2E2"; version="3.3.0"; sha256="10y6bagqg1h57c8g7m837qidrf7wdf8r0jcgqwrcgkr1kbxywfg9"; depends=[deSolve NetIndices]; }; StratifiedBalancing = derive2 { name="StratifiedBalancing"; version="0.3.0"; sha256="0pklnm0q0imdhyzhwyb4i0j441dkk4k6qqlx8d4q2xnl62drqnvv"; depends=[bnlearn plyr]; }; - StratifiedMedicine = derive2 { name="StratifiedMedicine"; version="1.0.2"; sha256="0vrymsq4n88c8shh2ragx731kyy75bp823kfzs4ldam4f77fp1pz"; depends=[dplyr ggparty ggplot2 glmnet mvtnorm partykit ranger survival]; }; + StratifiedMedicine = derive2 { name="StratifiedMedicine"; version="1.0.3"; sha256="0g9pgv2kmfzdb5caqhc4bylyvmrw1h82f5yaws2in7lyb9k527m0"; depends=[dplyr ggparty ggplot2 glmnet mvtnorm partykit ranger survival]; }; StratifiedRF = derive2 { name="StratifiedRF"; version="0.2.2"; sha256="0a5djia6xacs17nnr5knr1acwzicrffz73q9nvnhdmihazq8v27d"; depends=[C50 dplyr]; }; - StratigrapheR = derive2 { name="StratigrapheR"; version="1.1.1"; sha256="1r10sxl09diwn6d76i9ila9apjpfwglndh8z4njldk311nv5c2w0"; depends=[diagram dplyr reshape shiny stringr XML]; }; + StratifiedSampling = derive2 { name="StratifiedSampling"; version="0.1.0"; sha256="1pm2s6959xrmrq0qrajz9mkqicca50ja6fb2n6znlcfccgq9g8ha"; depends=[Matrix Rcpp RcppArmadillo]; }; + StratigrapheR = derive2 { name="StratigrapheR"; version="1.2.1"; sha256="1sxac5j1ihfsjazrmzjzilgh338cln0mk7j27f8qqpsxqk8zs0zh"; depends=[diagram dplyr reshape shiny stringr XML]; }; StreamMetabolism = derive2 { name="StreamMetabolism"; version="1.1.2"; sha256="1sv30i7armk7jhxg5x9lh0r9qq3xixn1k2h0q89halkh1yraal8a"; depends=[chron maptools zoo]; }; StressStrength = derive2 { name="StressStrength"; version="1.0.2"; sha256="1fq26bzmwsk4nzz9bgasyxz9alw8x2ssahz67mham7vw483w79pd"; depends=[]; }; String2AdjMatrix = derive2 { name="String2AdjMatrix"; version="0.1.0"; sha256="058r30kjjna02nmd6ngqfcnn1yk5390i20xvl6qb5qk3bcp2wmxn"; depends=[stringr]; }; @@ -4728,56 +4890,58 @@ in with self; { SubgrPlots = derive2 { name="SubgrPlots"; version="0.1.3"; sha256="1bi5zndkpgvyk563i0jdfrw73kkpa6zi3yx922dv90w6bdb9kvl2"; depends=[alluvial circlize colorspace diagram dplyr ggplot2 ggrepel gridBase gridExtra plyr polyclip scales shape sp survival survRM2 UpSetR VennDiagram]; }; SubpathwayGMir = derive2 { name="SubpathwayGMir"; version="1.0"; sha256="1rw94idhbnaszr2xv1wgnjcxlnxkml912pvmqh2a1nqpwca5mscy"; depends=[igraph XML]; }; SubpathwayLNCE = derive2 { name="SubpathwayLNCE"; version="1.0"; sha256="051csjavr9549y54yirfdn266i7swsvpbcakhziyz4sl4afwx5kl"; depends=[BiasedUrn graph igraph RBGL]; }; - SubtypeDrug = derive2 { name="SubtypeDrug"; version="0.1.3"; sha256="0rixcdkrm6l62sl3d4jpwn0kidcgr6z26yz3hzyyfzlkcv599l4j"; depends=[BiocGenerics ChemmineR devtools GSVA igraph pheatmap rvest xml2]; }; - SuessR = derive2 { name="SuessR"; version="0.1.1"; sha256="0hbhwd29q2z0f03p8cf197nbn4i2srrl5nymxy05d4gv2swl1cvn"; depends=[]; }; + SubtypeDrug = derive2 { name="SubtypeDrug"; version="0.1.4"; sha256="07wf07y1q4v0838lf97vlsr9zygdkycqcd1ms1alr4gjmsi2q7kf"; depends=[BiocGenerics ChemmineR devtools GSVA igraph pheatmap rvest xml2]; }; + SuessR = derive2 { name="SuessR"; version="0.1.3"; sha256="1733hxhp9ia6lp74ykqr3x7rynxh7nrqym1w41hcy19rs48bv945"; depends=[]; }; SummaryLasso = derive2 { name="SummaryLasso"; version="1.2.1"; sha256="1gb1g1xgda5psq93vy50yfr0cbhvymliblpkxz7ck1nwpp65n9py"; depends=[gtools]; }; Sunclarco = derive2 { name="Sunclarco"; version="1.0.0"; sha256="0jv92a4ciwkm0wa4irgb6ql3vf6v6p24fmbnk24pqp5p8drp8g5v"; depends=[survival]; }; Sunder = derive2 { name="Sunder"; version="0.0.4"; sha256="1na41nnscyc4v1qbwzfgqk503r39xxbi6f446pscrz3v0v121f1a"; depends=[mnormt]; }; - SunsVoc = derive2 { name="SunsVoc"; version="0.1.1"; sha256="1rcaip60hdfn496i0ynzkg5r9d9f4g8w502s85icczd07m20y6pb"; depends=[data_table ddiv dplyr magrittr purrr rlang stringr]; }; + SunsVoc = derive2 { name="SunsVoc"; version="0.1.2"; sha256="08qmkssxa75q2c8vl4i0560bazqjw1v00h6yl5zjwrxklws2m57p"; depends=[data_table ddiv dplyr magrittr purrr rlang stringr]; }; SunterSampling = derive2 { name="SunterSampling"; version="1.0.1"; sha256="0qfld3j8xlpgp7c58zqw6gzm38m4d740lvdj5vmcflfcc6ja98sf"; depends=[]; }; SupMZ = derive2 { name="SupMZ"; version="0.2.0"; sha256="1n81wqacrpk5x6i1pd1zsjivv2jk41743kg1h7gnp0rb3k58vp7r"; depends=[dplyr magrittr]; }; SuperExactTest = derive2 { name="SuperExactTest"; version="1.0.7"; sha256="1ysfsdzbkldcn7hzxhqikf5h2h9747xhfrirqgr8xx8q81wq989s"; depends=[]; }; SuperGauss = derive2 { name="SuperGauss"; version="2.0.1"; sha256="1v7bva9a4cjjaf924bj02421sk85hmirijrpcpayhyyjr65jscqh"; depends=[fftw R6 Rcpp RcppEigen]; }; SuperLearner = derive2 { name="SuperLearner"; version="2.0-26"; sha256="10b0fh71ky92mp0ydi81s6zm3sn47k5agppcg4zpgqmailn94qj4"; depends=[cvAUC nnls]; }; SuperPCA = derive2 { name="SuperPCA"; version="0.3.0"; sha256="139nym0szr7l7hq3xy60jwpx61896h5g7vrklxy7098w53iczyj4"; depends=[fBasics glmnet MASS matlab matlabr Matrix matrixStats pracma psych R_matlab RSpectra spls timeSeries]; }; - SuperRanker = derive2 { name="SuperRanker"; version="1.1.1"; sha256="1yiklw9zk7yw0xz5g3lmyl5lv325fnysimdwbxa37nyj6qdfv0ls"; depends=[prodlim Rcpp]; }; - SuperpixelImageSegmentation = derive2 { name="SuperpixelImageSegmentation"; version="1.0.2"; sha256="07zg9k8a0fb9x37q5wlahvg4xc0lnhidz0xvly8d330iqmxhxmyq"; depends=[ClusterR lattice OpenImageR R6 Rcpp RcppArmadillo]; }; - Superpower = derive2 { name="Superpower"; version="0.1.0"; sha256="0khslcma1b5nlyfwqdanlydblwxb4an94k75ffxpv603nrn3s26x"; depends=[afex dplyr emmeans ggplot2 gridExtra Hmisc magrittr MASS mvtnorm reshape2 tidyselect]; }; + SuperRanker = derive2 { name="SuperRanker"; version="1.2.0"; sha256="01wilk3cy33z50yhg4i4gci298fj8s4xbrkb7k3i9gn8q13vviin"; depends=[prodlim Rcpp]; }; + SuperpixelImageSegmentation = derive2 { name="SuperpixelImageSegmentation"; version="1.0.4"; sha256="0s6cizdxbv56sn2cijl7sdnvk4cpkmndmv01v4kvh1lwcfq8zz76"; depends=[ClusterR lattice OpenImageR R6 Rcpp RcppArmadillo]; }; + Superpower = derive2 { name="Superpower"; version="0.1.1"; sha256="1ihyn3p1r0h7v48qdkl1jwqhsqyvz4sgph77y2192jj1js0x36rn"; depends=[afex dplyr emmeans ggplot2 gridExtra Hmisc magrittr MASS mvtnorm reshape2 tidyr tidyselect]; }; SuppDists = derive2 { name="SuppDists"; version="1.1-9.5"; sha256="1i3iq12a5x5k49ac01mikzcrrq9gc148xq3m08h4xm07bha6f2v8"; depends=[]; }; SurfaceTortoise = derive2 { name="SurfaceTortoise"; version="1.0.2"; sha256="1l586x9np5rclqdrnv8b72ixlppzlnsq4yf99ny6aq5a9lwzmcgm"; depends=[gstat raster rgeos sp]; }; Surrogate = derive2 { name="Surrogate"; version="1.8"; sha256="0kqcij8bxh15ajqlcv6j8zx8c9p5yn0w94i06f0f4b3mpqw3vjik"; depends=[extraDistr ks lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rms rootSolve survival]; }; SurrogateOutcome = derive2 { name="SurrogateOutcome"; version="1.0"; sha256="0x91bmr4n9zn9cc72s91fzzsqhzhrkfpcbcla00gcsfmbjqz3997"; depends=[survival]; }; SurrogateRegression = derive2 { name="SurrogateRegression"; version="0.5.0"; sha256="06xdkg75fs1ymq5x20k5wnv6rji13rk049pm11b686wjvwycrsg7"; depends=[mvnfast plyr Rcpp RcppArmadillo]; }; SurrogateTest = derive2 { name="SurrogateTest"; version="1.2"; sha256="0wkyz9qkmvsrhvdga6w0qkbgqr7kr0yh04kkc19824sqnx452dc5"; depends=[survival]; }; - SurvBoost = derive2 { name="SurvBoost"; version="0.1.2"; sha256="17av00iwa3kpw0ihrvvynrfcghnq492b5k7n9fxfgf2nily24x2p"; depends=[directlabels ggplot2 mvtnorm plyr Rcpp RcppArmadillo RcppParallel reshape2 survival]; }; SurvCorr = derive2 { name="SurvCorr"; version="1.0"; sha256="01rqdl503q1qnkn49iqnsjzis6azdsfi6s2hjky5k2zd6c9g18k5"; depends=[fields survival]; }; SurvDisc = derive2 { name="SurvDisc"; version="0.1.1"; sha256="0ajvnm0a4krbm0m584bg58hd7dzl0f2rz5as1zsajx8agywb5qmv"; depends=[cubature MASS mvtnorm nlme simex survival]; }; SurvGSD = derive2 { name="SurvGSD"; version="1.0.0"; sha256="0aa5zaf9akkqkxs8iqwnm93sfwakhhhs3qfafbk0vrwmb5yvzzm1"; depends=[flexsurv ldbounds mnormt]; }; + SurvHiDim = derive2 { name="SurvHiDim"; version="0.1.0"; sha256="0v8gx3d0lc2qpdgy507idbxzzq9yccwr4p4c76h4zxmv2d19a0gd"; depends=[factoextra glmnet igraph Rdpack readr survival tidyverse useful]; }; SurvLong = derive2 { name="SurvLong"; version="1.1"; sha256="1lkbz5wa6ggwvg2aq13bc4hm6lqsj3wal5c33kamnrg9pk2cssj8"; depends=[]; }; SurvMI = derive2 { name="SurvMI"; version="0.1.0"; sha256="0qgsgz11vz73v83bkxrrjwk7i26rllkxk97if3nw2rgl9jnmiih0"; depends=[survival zoo]; }; SurvRegCensCov = derive2 { name="SurvRegCensCov"; version="1.4"; sha256="0ipr7lajnrklk963lrlgx946l6r191q3bfif4njkdmw0x797nzm2"; depends=[numDeriv survival]; }; SurvTrunc = derive2 { name="SurvTrunc"; version="0.1.0"; sha256="0b6s7llljp75agd57lmc1yq5acnfwy113khrfjcbm1l5ply6pz7f"; depends=[survival]; }; Survgini = derive2 { name="Survgini"; version="1.0"; sha256="1gxkdv2j1njbgnwb52vyhz7p2lrcg3hp6sry3kyhp4wkvf6gnhxi"; depends=[survival]; }; + SurviMChd = derive2 { name="SurviMChd"; version="0.1.0"; sha256="0q4x6yj5rc3b0asakxmy4vydgi1yafz17vvdr3c3chjyskhfip72"; depends=[dplyr ICBayes icenReg R2OpenBUGS Rdpack readr rlang survival tidyverse]; }; SvyNom = derive2 { name="SvyNom"; version="1.1"; sha256="1jym2x6nd9a3y7nk5hflqpy54gs67y4sqqspkvkalf5l2cc64did"; depends=[Hmisc rms survey survival]; }; SwarmSVM = derive2 { name="SwarmSVM"; version="0.1-6"; sha256="09xq7jx70qjyhblzh6kc40hdr0636rqqdnbka7m6rawhd8ivp8yz"; depends=[BBmisc checkmate e1071 kernlab LiblineaR Matrix SparseM]; }; - SwimmeR = derive2 { name="SwimmeR"; version="0.6.0"; sha256="0yycvijsrh9cxniy982n7nrdv2hpq2xykhyybrrcn2x6rk3ikq21"; depends=[dplyr magrittr pdftools purrr readr rvest stringr tibble xml2]; }; + SwimmeR = derive2 { name="SwimmeR"; version="0.9.0"; sha256="1hyb861sblxamn6whz0l50z1zmzvy6i0pn57h664ivrxwq1fz21f"; depends=[dplyr magrittr pdftools purrr readr rvest stringr tibble xml2]; }; SwissAir = derive2 { name="SwissAir"; version="1.1.5"; sha256="0lh69924vhyilgn562jqn8m7z4dq3xmdj09501sbs7hbxfaiiyly"; depends=[]; }; SyNet = derive2 { name="SyNet"; version="2.0"; sha256="0mb9dscddkvmkf7l3bbcy4dlfmrvvy588vxdqy5dr783bpa5dkiw"; depends=[tkrplot]; }; SyScSelection = derive2 { name="SyScSelection"; version="1.0.2"; sha256="16zx507hlzhdxbh6gzndbgmzpyp6vc59h441l4gv8lx58zi9kyjd"; depends=[pracma]; }; SymTS = derive2 { name="SymTS"; version="1.0"; sha256="17vhm00zd9yxl6li36bsfkm4rsizjsm93ibrzgqnkl72sqmmlwfi"; depends=[]; }; - SymbolicDeterminants = derive2 { name="SymbolicDeterminants"; version="1.2.0"; sha256="1z24qn6dja6axynqq98zw9pzxwx30aafk53lqlajirnnrmxrvxx6"; depends=[fs]; }; + SymbolicDeterminants = derive2 { name="SymbolicDeterminants"; version="2.0.0"; sha256="0hf9b9g2vgpyqbxgi5rkkls2b8vw1zrwl8lymwvwb6y1vwfl9pym"; depends=[arrangements fs]; }; SyncMove = derive2 { name="SyncMove"; version="0.1-0"; sha256="1jlnsj5v8y5pijfkww7ng7nkwvj93naw29wcxxj130ww5qk7qk1z"; depends=[]; }; SyncRNG = derive2 { name="SyncRNG"; version="1.3.0"; sha256="0sywfmmy6mq6qsxkxjc67665snn1jds01j3h7ni1200igja139g2"; depends=[]; }; SynchWave = derive2 { name="SynchWave"; version="1.1.1"; sha256="127hllvig8kcs9gr2q14crswzhacv6v2s4zrgj50qdyprj14is18"; depends=[fields]; }; Synth = derive2 { name="Synth"; version="1.1-5"; sha256="1cfvh91nz6skjk8jv04fhwv3ga9kcsfgq3mdy8lx75jkx16zr0pk"; depends=[kernlab optimx]; }; - SynthETIC = derive2 { name="SynthETIC"; version="0.1.0"; sha256="0xlfmsy8dgkajm1r2g5vi63b1vzmq4rvvc6099axn9s8h2yj6w9q"; depends=[ggplot2 magrittr rlang]; }; + SynthETIC = derive2 { name="SynthETIC"; version="1.0.0"; sha256="0xjfl5fjsbmjgclbynf1z7zknnf0wyr18i8da46qp3j8s4lbznfk"; depends=[ggplot2 magrittr rlang]; }; SynthTools = derive2 { name="SynthTools"; version="1.0.1"; sha256="19vasz3nnm5vgwqs6g2a5bibmk44br1bxga5zavsx938x3jw9gnd"; depends=[dplyr magrittr Rdpack]; }; SystemicR = derive2 { name="SystemicR"; version="0.1.0"; sha256="1vk08w734zxvrwzd81iy0azwcj53k6wvgc1qlaxw96hirdwdg6zr"; depends=[igraph Matrix quantreg xts]; }; T2EQ = derive2 { name="T2EQ"; version="1.1"; sha256="1skkkryw63pfx1xslia1lczb2psja6v6hcbph4isdcksb4l4pcig"; depends=[]; }; - T4cluster = derive2 { name="T4cluster"; version="0.1.0"; sha256="11x7y8yb7cmjz1a6n53lzhh6q3l76g8jqh8c3xbmnr7hxzbqiwl6"; depends=[maotai Rcpp RcppArmadillo Rdimtools Rdpack]; }; + T4cluster = derive2 { name="T4cluster"; version="0.1.1"; sha256="0f2s6y6n9z9ikiacn67kypmqzfzlg985qbjz5icmq0g7rcdqqlgb"; depends=[ADMM fda ggplot2 lpSolve maotai MASS mclustcomp Rcpp RcppArmadillo Rdimtools Rdpack rstiefel scatterplot3d]; }; T4transport = derive2 { name="T4transport"; version="0.1.0"; sha256="0cp2881j6qyzh1yl23f2layhldsgdy7ic7c8c4hydfv7c7qkkg3d"; depends=[lpSolve Rcpp RcppArmadillo Rdpack]; }; + TAF = derive2 { name="TAF"; version="4.0.0"; sha256="0v796lrfb2n2m74vdgm9f1gm9c8xc780d09rgwfdcc4q3nr3gld8"; depends=[lattice]; }; TAG = derive2 { name="TAG"; version="0.2.1"; sha256="1sr24mi7s7z155xzs0aki21ywcq10gjc93nra2x6pfm20ymlyndl"; depends=[DiceKriging FastGP foreach Matrix mgcv mlegp randtoolbox Rcpp RcppArmadillo]; }; - TAM = derive2 { name="TAM"; version="3.5-19"; sha256="1x1pdy0hrk4c3x5l4gcslpvyb0sv2zgly4n3a7y8j6yrzajx0sg7"; depends=[CDM Rcpp RcppArmadillo]; }; + TAM = derive2 { name="TAM"; version="3.6-45"; sha256="1i9frqh6xf7h8r3q66xy0kfgwsxdhj6p9r9ga043aqmwk92q78b8"; depends=[CDM Rcpp RcppArmadillo]; }; TANDEM = derive2 { name="TANDEM"; version="1.0.3"; sha256="151rm95q2naw9y58df1lr2qiadnkgfb5j9v47v41bw4iipsmlp4p"; depends=[glmnet Matrix]; }; TAQMNGR = derive2 { name="TAQMNGR"; version="2018.5-1"; sha256="0bf0sgqa53l9y2bhwg2ngiwlcgrmj0nvxchlsmcc8zin388qf4pb"; depends=[Rcpp]; }; TAR = derive2 { name="TAR"; version="1.0"; sha256="0wjh2n9x3yn9by9a6mjvkl96qy7z549g6dsqp7b4d96xwmyqxlbv"; depends=[mvtnorm]; }; @@ -4786,11 +4950,12 @@ in with self; { TBFmultinomial = derive2 { name="TBFmultinomial"; version="0.1.3"; sha256="0cd0dr8vkf0sfriaafp2x63dilxmirm0fljxm82zw77c9j5ly3kv"; depends=[nnet plotrix stringr VGAM]; }; TBRDist = derive2 { name="TBRDist"; version="1.0.2"; sha256="0xwr91fyx3x27szkafmcs5sffgs64svky7mddrrgcfnbdl5c4iia"; depends=[ape BH Rcpp Rdpack TreeDist TreeTools]; }; TBSSurvival = derive2 { name="TBSSurvival"; version="1.3"; sha256="1r87qvnlvc18i12yi25lfpdb8b5p33fywi38hs2xp1y2vbvz5s9b"; depends=[BMS coda mcmc normalp R_utils Rsolnp survival]; }; - TCA = derive2 { name="TCA"; version="1.1.0"; sha256="0pj052kd378x1gmg5wcbk8c0dca3c2ra65hnagljmsplv169vimy"; depends=[config data_table futile_logger glmnet gmodels Matrix matrixcalc matrixStats nloptr pbapply pracma quadprog rsvd]; }; + TCA = derive2 { name="TCA"; version="1.2.1"; sha256="1gyps0m7r44vcbzpbrs3xy2kyb2xsvmfzk1c0aq04s4ndcksplwb"; depends=[config data_table futile_logger gmodels Matrix matrixcalc matrixStats nloptr pbapply pracma quadprog rsvd]; }; TCGAretriever = derive2 { name="TCGAretriever"; version="1.5"; sha256="1xg1rz2h5jbpdd5axli3ripqxb0bj64yrd4y5nzr8axajiaybkj9"; depends=[httr]; }; TCIApathfinder = derive2 { name="TCIApathfinder"; version="1.0.6"; sha256="15f3w6vhbqy4xzidxasjnqigxchd3jbr2kpm3gggjnkp7rzsfgaf"; depends=[httr jsonlite]; }; - TCIU = derive2 { name="TCIU"; version="1.1.0"; sha256="0hlav6i4jvqaa1nhqplqpbw35zcswmrm1x4h3h230zcravmrr1gr"; depends=[AnalyzeFMRI cubature doParallel dplyr DT extraDistr fancycut fmri foreach forecast geometry ggplot2 ggpubr gridExtra ICSNP MultiwayRegression plotly pracma RColorBrewer reshape2 rrcov scales spatstat tidyr zoo]; }; - TDA = derive2 { name="TDA"; version="1.6.9"; sha256="023jwhh1qc2y30g42pgfaha4n4pixzwrrghxlyss4889fr66q9vw"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; + TCIU = derive2 { name="TCIU"; version="1.2.0"; sha256="0cyagbvcb8x1bszwq8id75838n53l1kcdah7hhm679j2wm4i487s"; depends=[AnalyzeFMRI cubature doParallel dplyr DT extraDistr fancycut fmri foreach forecast geometry ggplot2 ggpubr gridExtra ICSNP MultiwayRegression plotly pracma RColorBrewer reshape2 rrcov scales spatstat_core spatstat_geom tidyr zoo]; }; + TDA = derive2 { name="TDA"; version="1.7.7"; sha256="1vrpqzswhjwqc4rsvapzfd92cmkvnibibiiac44i8ic50nryw00j"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; + TDAkit = derive2 { name="TDAkit"; version="0.1.0"; sha256="0qjmxvf2flkqphd7nh5sfsa60sga7fdvvz2gspjbk7rrs46n7ayn"; depends=[energy ggplot2 maotai Rcpp RcppArmadillo Rdpack TDAstats]; }; TDAmapper = derive2 { name="TDAmapper"; version="1.0"; sha256="0cxgr2888v8azgdr3sg4vlcdyivkrxkk6dsp1ahv4frrwvg2z09k"; depends=[]; }; TDAstats = derive2 { name="TDAstats"; version="0.4.1"; sha256="1zmickqk60vm9rzy67hib835v3c45aqjk441p31vpbvhbiy58nq5"; depends=[ggplot2 Rcpp]; }; TDCor = derive2 { name="TDCor"; version="0.1-2"; sha256="18085prcwhl5w717f1f7jcqskw2jvigvjjs2l5y6106ibiam6hxx"; depends=[deSolve]; }; @@ -4814,25 +4979,29 @@ in with self; { TIMP = derive2 { name="TIMP"; version="1.13.2"; sha256="1y1bc6wsd32792apsc6qncxbw5y8ww9xlhy9v49mhwbffgzn6llg"; depends=[colorspace deSolve fields gclus gplots minpack_lm nnls]; }; TITAN2 = derive2 { name="TITAN2"; version="2.4.1"; sha256="16zf42s1as2xrvyhd0lnv36mgnr5w19xv11pkl0k8imb5bdkhxa2"; depends=[cowplot dplyr ggplot2 ggridges glue purrr snow tibble]; }; TInPosition = derive2 { name="TInPosition"; version="0.13.6.1"; sha256="1c0h9zg71whmsjn5rnzv5kdrabl9kqrq627caznvrpa74c7pjks9"; depends=[ExPosition InPosition prettyGraphs TExPosition]; }; + TKCat = derive2 { name="TKCat"; version="0.5.4"; sha256="061xdb5gqdxik3wwp9daz3kj9kjd77dzq7h5q883nqdlg4gzksp3"; depends=[base64enc DBI dplyr DT future getPass jsonlite jsonvalidate magrittr markdown promises RClickhouse readr ReDaMoR rlang shiny shinydashboard tidyselect visNetwork]; }; TLBC = derive2 { name="TLBC"; version="1.0"; sha256="08w187akbhfbz6nrrf7avf02lrhgj7bbrjmim9gkh4wlbjhzvw67"; depends=[caret HMM randomForest signal stringr]; }; - TLMoments = derive2 { name="TLMoments"; version="0.7.5"; sha256="0v86rs7f63f59ng9m6lnjgv52czg1xk814flnhz153fjy7y2pidl"; depends=[ggplot2 hypergeo Rcpp]; }; - TMB = derive2 { name="TMB"; version="1.7.18"; sha256="0dbps92sni9rnynj31z9zhg6l0vbczxhzlw7gnhpxjlzfnsglp3y"; depends=[Matrix RcppEigen]; }; + TLMoments = derive2 { name="TLMoments"; version="0.7.5.2"; sha256="0l9d4yafkkn3qdg9ypy3fiqnzxzv8yzxkq6mh1j28g94s4h6lybh"; depends=[ggplot2 hypergeo lmomco Rcpp]; }; + TMB = derive2 { name="TMB"; version="1.7.20"; sha256="14wapc8bicr4j7mmrv1hrsw407lsbr7l4cfvy3j9sfjdbrq31a37"; depends=[Matrix RcppEigen]; }; TMDb = derive2 { name="TMDb"; version="1.1"; sha256="062n9mi2f9g2xxpnymja57xnpl855d8mwyfwci7a8cq4c7w7avj7"; depends=[httr jsonlite stringi]; }; TNC = derive2 { name="TNC"; version="0.1.0"; sha256="0639wvylmk9mapvmz79ij65g1phv3ylc683awi4pgaf9yfwlmjkn"; depends=[]; }; + TNRS = derive2 { name="TNRS"; version="0.1.0"; sha256="146shb1dg4iyaanrdr1l8nqpiqf05la1ai34w74z6wsd1mpcchqy"; depends=[jsonlite RCurl rjson]; }; TOC = derive2 { name="TOC"; version="0.0-5"; sha256="0zk6j1yc4gpvkswnfrlyfvqc69wr4q3ys59y7v03fhzwasqj0an2"; depends=[bit raster rgdal]; }; - TOHM = derive2 { name="TOHM"; version="1.3"; sha256="08qwqryy9vdh906k3rhq4csysxlxgki4jjr505shfrxjvnlc662i"; depends=[EQL igraph Matrix nloptr Rmpfr]; }; + TOHM = derive2 { name="TOHM"; version="1.4"; sha256="15i9hrvxlnwbs9vrsyrfhnm4xwmi97hss2da0xqs1xj5nmzwymqh"; depends=[EQL igraph Matrix nloptr Rmpfr]; }; TOSTER = derive2 { name="TOSTER"; version="0.3.4"; sha256="1pxcvlw2nhh1sv0d662xc61rykf7kz7f4xjq3yrqf119gjcmps5s"; depends=[ggplot2 jmvcore R6]; }; TP_idm = derive2 { name="TP.idm"; version="1.5"; sha256="07rxn0mpar3p6blg8fd3kbvdngyz9h9n0r0lcljnfdajfzbysv7h"; depends=[]; }; TPD = derive2 { name="TPD"; version="1.1.0"; sha256="1ppj6ppi0lhlz079ygjnwx1l5f36bsi8zax23ssr1w6h4csw748m"; depends=[ggplot2 gridExtra ks mvtnorm]; }; TPEA = derive2 { name="TPEA"; version="3.1.0"; sha256="1yyc3q4dyf4d8m7wi851dnxf3xnvvfnvj28kl8z8py4r4jsb2hfy"; depends=[foreach igraph Matrix MESS RCurl XML]; }; TPES = derive2 { name="TPES"; version="1.0.0"; sha256="00g1limcappjrly93x7xb1llrgaxivmiky3kw40w2fs0303ha3d7"; depends=[]; }; - TPLSr = derive2 { name="TPLSr"; version="1.0.1"; sha256="1byi8w38mr4p7ni2wvyamqyjcz97hm6da784070a9c4p8jp4bwv2"; depends=[plotly]; }; + TPLSr = derive2 { name="TPLSr"; version="1.0.3"; sha256="1p2ij8cbis863rnl2s4mlgj0mip2g9hdnp5bqi7si7bl7var3rr7"; depends=[plotly]; }; TPmsm = derive2 { name="TPmsm"; version="1.2.2"; sha256="1ibb3ayd808x3a562qldaww7czmfq1cd1j4g4ch5k7q38jw5x835"; depends=[KernSmooth]; }; TR8 = derive2 { name="TR8"; version="0.9.22"; sha256="12miq65yl39pngpsa30qjcwp21vn93a4wvid03pmbf6x6hq0v4k7"; depends=[dplyr plyr rappdirs RCurl readxl reshape shiny taxize XML]; }; TRADER = derive2 { name="TRADER"; version="1.2-3"; sha256="1w9m2b866dyj82s118m64q8j9a1chpq2km2pnn9mfwwj8sivgdgn"; depends=[dplR]; }; TRAMPR = derive2 { name="TRAMPR"; version="1.0-9"; sha256="16fbzp6b6y25k9h7m4qpmbgj10przywm2rh8kvw8a8p0xkskc9k5"; depends=[]; }; TRD = derive2 { name="TRD"; version="1.1"; sha256="0bhn4bcrq39f5dgqc74jqsfhs1iqfxhawacqqyncbk2372013nqp"; depends=[Rlab]; }; TRES = derive2 { name="TRES"; version="1.1.3"; sha256="104nxscgihmlblypy576h8z6vwspvcbv40miilh5n52ab0hmk5b6"; depends=[ManifoldOptim MASS pracma rTensor]; }; + TREXr = derive2 { name="TREXr"; version="1.0.0"; sha256="1dkp3l5cix06bhidmr9npd2f2my9hcm0qmdar0hwkcm1zrl1ha4w"; depends=[boot chron doParallel doSNOW dplyr foreach lhs lubridate magrittr msm randtoolbox sensitivity solaR tibble zoo]; }; + TRMF = derive2 { name="TRMF"; version="0.0.2"; sha256="13c1kzxnp9xpq12nk04s0fkl0nfyi018709ssg45xfacvfb5zvpw"; depends=[generics limSolve Matrix]; }; TSA = derive2 { name="TSA"; version="1.3"; sha256="1bv5q609lhmrcxnjnvcj497fbjlv89zwa8q918hw4iki5nkvwwdb"; depends=[leaps locfit mgcv tseries]; }; TSCS = derive2 { name="TSCS"; version="0.1.1"; sha256="0dllaw69rl26hgqac5q66k13gfmnxhn3wf0j8nx5xvi7yclzc3ay"; depends=[ggplot2 rgl tseries]; }; TSDFGS = derive2 { name="TSDFGS"; version="1.0"; sha256="1wk1j0bzcapp2pknhiichh947xs6dpkrfr2h7s1vqyzb9a0yajif"; depends=[Rcpp RcppEigen]; }; @@ -4840,7 +5009,7 @@ in with self; { TSE = derive2 { name="TSE"; version="0.1.0"; sha256="0fzdlryb8m9h6q8w0q42wpphmvm439zxk1imqzmskm48r7w6nm7w"; depends=[]; }; TSEind = derive2 { name="TSEind"; version="0.1.0"; sha256="0xv968a12p9riq5nk82gq1ixglb2077c99i2a5ws6s23xzs1s29h"; depends=[]; }; TSEntropies = derive2 { name="TSEntropies"; version="0.9"; sha256="1bwb3kyhzc6sxhvpagf4vjmh8ghx44lpc9ms4jwrsrzdhcvnfc7l"; depends=[]; }; - TSEtools = derive2 { name="TSEtools"; version="0.1.4"; sha256="1dfamkpiczw9zgyhjzx8vwd5hvadxbf3i0sf9xcx9fbr6d9hb3gz"; depends=[quantmod xts]; }; + TSEtools = derive2 { name="TSEtools"; version="0.2.1"; sha256="1f2rs3mkypnl9bjjqaaggj6g8kr2rmk12934fbhxcdz2vmlqxpga"; depends=[quadprog quantmod xts]; }; TSEwgt = derive2 { name="TSEwgt"; version="0.1.0"; sha256="0j14vja4r4qvw4f94461adi1g4igx9c0az20z6bkbkkhp79xi62l"; depends=[]; }; TSF = derive2 { name="TSF"; version="0.1.1"; sha256="0v3pq64yknp3n6lw6c87slv1avsv7rlb82gm670q4jzv5d174phv"; depends=[forecast fracdiff]; }; TSGSIS = derive2 { name="TSGSIS"; version="0.1"; sha256="0zrlin6xi6sv5qb18a0wi8lzldqlwa9lbwnra44w3jza3kakff7n"; depends=[glmnet MASS]; }; @@ -4852,10 +5021,10 @@ in with self; { TSMySQL = derive2 { name="TSMySQL"; version="2015.4-1"; sha256="1gdda7li320ba9qfxfl5c4cwl2ln5jdbvid98cryj175g0nbmx7b"; depends=[DBI RMySQL tframe TSdbi TSsql]; }; TSP = derive2 { name="TSP"; version="1.1-10"; sha256="0z1v6m0vqjzxc4az3zyjaayygx0jr3mdmc56jjd421iqh0b9z5s4"; depends=[foreach]; }; TSPostgreSQL = derive2 { name="TSPostgreSQL"; version="2015.4-1"; sha256="11201zpbrva6gwc9hg8pynadrps6d8pb3syzba9nyjpv2ck6x3ry"; depends=[DBI RPostgreSQL tframe tframePlus TSdbi TSsql]; }; - TSPred = derive2 { name="TSPred"; version="4.0"; sha256="0zjx33llkvvj7m4z16crybw0y6s6zvlblxn2in3j7v9cv0ihhsa8"; depends=[EMD forecast KFAS MuMIn vars wavelets]; }; + TSPred = derive2 { name="TSPred"; version="5.1"; sha256="14dzpm5i5iml9kb49rnw7kq1ga03l4c6m485b1p8p3ya0n6mivkl"; depends=[dplyr e1071 elmNNRcpp EMD forecast keras KFAS magrittr ModelMetrics MuMIn nnet plyr randomForest Rlibeemd RSNNS tfdatasets vars wavelets]; }; TSS_RESTREND = derive2 { name="TSS.RESTREND"; version="0.3.1"; sha256="1la1ff9ajcabdsz5f2761647304fpwp779gv0gjds4mg25rf6n2f"; depends=[bfast broom ggplot2 mblm RcppRoll strucchange]; }; TSSQLite = derive2 { name="TSSQLite"; version="2015.4-1"; sha256="10z8s967wmapkb56hh2brb5bafgqr8flwh0sr72yqqv0ca2d06sc"; depends=[DBI RSQLite tframe tframePlus TSdbi TSsql]; }; - TSSS = derive2 { name="TSSS"; version="1.2.4"; sha256="0g9viv761hvwsv8c37cpy9v6y3qs8nnkzpfccxp169vvyhs2ixkv"; depends=[]; }; + TSSS = derive2 { name="TSSS"; version="1.3.1"; sha256="06wnbj741yyi5b483zhbaccvqpbg8lh3z9vnrxy64x28hnn79cly"; depends=[]; }; TSTr = derive2 { name="TSTr"; version="1.2"; sha256="0nljkqsrwzg7i82arpfrz2k9m1k1akin1akf01c5cadxq4rgarsf"; depends=[data_table stringdist stringr]; }; TSTutorial = derive2 { name="TSTutorial"; version="1.2.3"; sha256="0hpk6k3lc72p8pdz5aad04lcjsz9k443h5gs09dc3i10wqw3yhxs"; depends=[MASS]; }; TSVC = derive2 { name="TSVC"; version="1.2.1"; sha256="11qivqrss54mzgkma0bkjrpiks5rxc43bmygp6i4chka45k8xiq3"; depends=[mgcv plotrix]; }; @@ -4878,10 +5047,10 @@ in with self; { TTR = derive2 { name="TTR"; version="0.24.2"; sha256="06vicgbhwpsww09hhha5mbcd0cwip6cvkfbhjjhp950rv64bk1r5"; depends=[curl xts zoo]; }; TTS = derive2 { name="TTS"; version="1.0"; sha256="0dhxj474dqjxqg0fc2dcx8p5hrjn9xfkn0rjn2vz3js92fa9ik9h"; depends=[mgcv sfsmisc]; }; TTmoment = derive2 { name="TTmoment"; version="1.0"; sha256="0a4rdb4fk1mqnvvz0r15kni0g5vcj4xkkcwwv7c2gxc94xh5i5ih"; depends=[mvtnorm]; }; - TULIP = derive2 { name="TULIP"; version="1.0.1"; sha256="0kwkyv266pslsb2rpcri8k3jmhb3p4i7z0axdbx51l2cxglw9pzn"; depends=[glmnet MASS Matrix tensr]; }; + TULIP = derive2 { name="TULIP"; version="1.0.2"; sha256="16jf6ybwrhc4ckajdzpswilzn09agqz7mxg9a93gxkqvc2rwh5br"; depends=[glmnet MASS Matrix tensr]; }; TUWmodel = derive2 { name="TUWmodel"; version="1.1-1"; sha256="1am3ywcj1rqgz5i2g9c6d6fgiv8b2nabllfy84xx1n18pin7mfbk"; depends=[]; }; TVMM = derive2 { name="TVMM"; version="3.2.1"; sha256="0z2gdcci9pbpgnmr6dch5v0rsn34q18rwb14x9gyxdcvh3bch8z0"; depends=[DescToolsAddIns ggplot2 gridExtra MASS robustbase tcltk2]; }; - Taba = derive2 { name="Taba"; version="0.2.0"; sha256="0ciczkjm33pr52s9awqmk9dh0qd20jh43g04xk0zphgq8fmhkl20"; depends=[robustbase]; }; + Taba = derive2 { name="Taba"; version="1.0.0"; sha256="1kix89hz660icgmlv2mg905kq6pkrqvrkjfxl57s2wdbb41mgb8r"; depends=[robustbase]; }; Table1Heatmap = derive2 { name="Table1Heatmap"; version="1.1"; sha256="1nrabjivfsdhaqmlq365pskkrp99jqsxn8vy03mdnqn5h5zv7wvx"; depends=[colorRamps]; }; TableHC = derive2 { name="TableHC"; version="0.1.2"; sha256="1il86xjc4h1sdq3gpi4s7xbkcgzpgfqy5ivzjdkbq45d06pssk21"; depends=[]; }; TableMonster = derive2 { name="TableMonster"; version="1.7"; sha256="1xa4bkcpzhm50dwbpya346swjjfw46n2x26xm30p8gppilg5c0lb"; depends=[xtable]; }; @@ -4895,10 +5064,11 @@ in with self; { TauP_R = derive2 { name="TauP.R"; version="1.5"; sha256="02vk9rj8yx4n2pihgk93bs2f9wkpkyfqm2kp7ixj4wpa29a0iq6v"; depends=[]; }; TauStar = derive2 { name="TauStar"; version="1.1.4"; sha256="06bb6570mqzfbjw2qp4bjl4a1bdpwsvcr0vw2y4l1x444m670ds1"; depends=[Rcpp RcppArmadillo]; }; TaxicabCA = derive2 { name="TaxicabCA"; version="0.1.1"; sha256="0izjf6vrdjvs9axvafr2mamr157i8w6d7m5sfjch1p5c174cpr9c"; depends=[]; }; - Taxonstand = derive2 { name="Taxonstand"; version="2.2"; sha256="1cpx5mp17l9gjvb60f0ypm8r8b69ff520p67jac8y6rvw8aqhc6j"; depends=[pbapply]; }; + Taxonstand = derive2 { name="Taxonstand"; version="2.3"; sha256="17hqjxbwggvs6lilkcnzgyy24winhh17cxmrk7jhjkrmmwk86m5v"; depends=[pbapply]; }; TcGSA = derive2 { name="TcGSA"; version="0.12.7"; sha256="0l28sldpavyvhm9hab9gb7i7rmlxpj7ivffi6xx8lg7qjn6d21v5"; depends=[cluster cowplot ggplot2 GSA gtools lme4 multtest reshape2 stringr]; }; Tcomp = derive2 { name="Tcomp"; version="1.0.1"; sha256="1k0gsf3yr5n9zc2yi6szxm6s7bf61lz4fx8m3v48jlp5w900prwb"; depends=[forecast Mcomp]; }; TeXCheckR = derive2 { name="TeXCheckR"; version="0.7.0"; sha256="0r85yhk3p4ibkzkbjm7j9zpryp1dhajbmaqyfwr4bv1zh29smrxa"; depends=[clisymbols crayon data_table fastmatch hunspell hutils magrittr rstudioapi zoo]; }; + TeachHist = derive2 { name="TeachHist"; version="0.1.2"; sha256="0s1bmg0ff0b045r99xxy47ydwda55mzsbnsc21g92qxvsh8hlcga"; depends=[dplyr ggplot2]; }; TeachNet = derive2 { name="TeachNet"; version="0.7.1"; sha256="12kkpr96mq0jr07k7ivcmwhrfgas1qrfqfhxa4gm7vv3vkjn0gs9"; depends=[]; }; TeachingDemos = derive2 { name="TeachingDemos"; version="2.12"; sha256="0i46d7269zhvr3c2a2w1lb3jnhc1cgwhcppqdmnl1ymgw5f40x9y"; depends=[]; }; TeachingSampling = derive2 { name="TeachingSampling"; version="4.1.1"; sha256="02nywwmv0r8md00kra7wxwzvm6p51l4p8la51bxh8sqq8ajsdswh"; depends=[dplyr magrittr]; }; @@ -4906,19 +5076,20 @@ in with self; { TempCont = derive2 { name="TempCont"; version="0.1.0"; sha256="1pl0czrpw74zfm5vycyl0h8hc3n5whf4g6a2759a22384gk5fq7k"; depends=[nlme]; }; Temporal = derive2 { name="Temporal"; version="0.2.0"; sha256="114ld41l2dipw7cpyh7fy3n332v1dkiqvdng6vkk9wm6jmda7wya"; depends=[expint numDeriv plyr Rcpp RcppArmadillo]; }; Tendril = derive2 { name="Tendril"; version="2.0.4"; sha256="1wvczfklsccs8jd081vb6d6h7i35lhf6na925fm7wq8ars0b23wd"; depends=[dplyr ggplot2 magrittr plotly plyr reshape2 scales]; }; - TensorTest2D = derive2 { name="TensorTest2D"; version="1.0.0"; sha256="1i031wd2ym2yb38ydgy47hmlsk7nnn0vg4p9l2a7z6x4x7sd3jdv"; depends=[]; }; + TensorClustering = derive2 { name="TensorClustering"; version="1.0.1"; sha256="0zw41h07kxrm6rdvpp5p11bwjqjx9iwldv5lk0yplivkvnnrdpxy"; depends=[abind combinat MASS mvtnorm pracma Rcpp rTensor tensr TRES]; }; + TensorTest2D = derive2 { name="TensorTest2D"; version="1.0.2"; sha256="0jjdcfl4fq74qn9vjj23lpk2k5qvmf1hmc3bgly36kf1625wvp8q"; depends=[]; }; Ternary = derive2 { name="Ternary"; version="1.2.1"; sha256="0jbzvxl9pqqw84a3vbgq4sq7m0izxh6zmc3x2d1qxyk11fvbvwxn"; depends=[shiny viridisLite]; }; TestCor = derive2 { name="TestCor"; version="0.0.2.2"; sha256="01ndiqi0z672ymm2bid0r0cqz8fqd9268xgmmq74z3agj81l5c5j"; depends=[MASS Rcpp RcppArmadillo]; }; TestDataImputation = derive2 { name="TestDataImputation"; version="1.2"; sha256="1nba79i8wr6g1m8hrfa0msz28j9rly51bm8b1qkigfxnzpdhyjmq"; depends=[Amelia mice]; }; - TestDesign = derive2 { name="TestDesign"; version="1.1.3"; sha256="1bqgyz3d5i0yz839vhs9ag1m5q9ydx6bnw9mbdnyjmhdpmjkb9wm"; depends=[crayon foreach logitnorm lpSolve Rcpp RcppArmadillo]; }; - TestDimorph = derive2 { name="TestDimorph"; version="0.3.5"; sha256="0fqxc5smf27b1njlc40x71kcr3bbby1i40pw4r1hhsam0hyvrp2q"; depends=[caret corrplot cutpointr dplyr ggplot2 multcompView Rfast tibble tidyr tmvtnorm truncnorm]; }; + TestDesign = derive2 { name="TestDesign"; version="1.2.2"; sha256="17wvg0fcj7zaykvdlry45qlmsp4h1p34bn8y7240276yg5hw4q6p"; depends=[crayon foreach logitnorm lpSolve Rcpp RcppArmadillo]; }; + TestDimorph = derive2 { name="TestDimorph"; version="0.4.1"; sha256="09r265mmr3bk78pqca30n9bz62p6822mg0nhrfaip2lxhl3bfqcw"; depends=[caret corrplot cutpointr dplyr ggplot2 Morpho multcompView tidyr tmvtnorm truncnorm]; }; TestFunctions = derive2 { name="TestFunctions"; version="0.2.0"; sha256="018nkz8r6vqahrzq3d588i3ffb1bmd1pdk87j4ivcdsx99mq15sn"; depends=[]; }; + TestGardener = derive2 { name="TestGardener"; version="0.1.4"; sha256="1230nrislm4ci22s9y160842qiccf3ngmfq8fywm8vg57xggz1dj"; depends=[dplyr fda ggplot2 ggpubr knitr pracma rgl rmarkdown stringr tidyr utf8]; }; TestScorer = derive2 { name="TestScorer"; version="1.7.2"; sha256="006c3g3gx55mfr93srldwvgz5vm6nkr3f57yi4qg6krn0d32865f"; depends=[]; }; TestingSimilarity = derive2 { name="TestingSimilarity"; version="1.1"; sha256="1iq0wh13rl6rby44ql4d286r1akzwmbpsvnq9p8lkl8709z0d34w"; depends=[alabama DoseFinding lattice]; }; TexExamRandomizer = derive2 { name="TexExamRandomizer"; version="1.2.3"; sha256="0l0vpx4rkib2m8hwhwy9j8pqyf7gpb9qg8wpnh3238snwpadgy3a"; depends=[assertthat jsonlite Rcpp stringr]; }; - TexMix = derive2 { name="TexMix"; version="0.5.3"; sha256="0qp7rlw4y2kw6bvh3rwy33p1g404q4ar1gg8ycdapwsyckq76nhn"; depends=[classInt Formula maptools RColorBrewer sp]; }; TextForecast = derive2 { name="TextForecast"; version="0.1.2"; sha256="0yj2m22imzllz07wx04nar2mfpyl06jiq0ya1nwgaq74kaiym42p"; depends=[doParallel dplyr forcats ggplot2 glmnet Matrix pdftools plyr pracma RColorBrewer tidyr tidytext tm udpipe wordcloud]; }; - TextMiningGUI = derive2 { name="TextMiningGUI"; version="0.2"; sha256="0m4iihwsj8qlnp70nzz10yjql9ynd92iiy2wmdj40pqdrwsx1x13"; depends=[dplyr ggplot2 ggwordcloud RColorBrewer slam syuzhet tibble tidyr tidytext tm]; }; + TextMiningGUI = derive2 { name="TextMiningGUI"; version="0.3"; sha256="0hl4rswc3icwf11idk9ydrbd3ghz6mb1vnabknal0fxffpdi37dd"; depends=[dplyr ggplot2 ggwordcloud RColorBrewer slam syuzhet tibble tidyr tidytext tm]; }; ThankYouStars = derive2 { name="ThankYouStars"; version="0.2.0"; sha256="0r77ns3102wj1wvrfsa06l427imxyfhigpbs36cdxl2j87qrjzl6"; depends=[httr jsonlite]; }; ThermIndex = derive2 { name="ThermIndex"; version="0.2.0"; sha256="0s9d55577dq61qixwwfwmqc2k2c8my00j2ng97ng42cw0jc7aylm"; depends=[]; }; Thermimage = derive2 { name="Thermimage"; version="4.0.1"; sha256="021kjmy0ilg033gf9l46dqfsyd0625v21mcc3sj2smv2dipr8hwd"; depends=[png tiff]; }; @@ -4935,87 +5106,92 @@ in with self; { TideHarmonics = derive2 { name="TideHarmonics"; version="0.1-1"; sha256="1g1v99gh6mns4l8ipmw7kpalbk07m92ybcqjq7b0wsjmdvs1y67s"; depends=[]; }; TideTables = derive2 { name="TideTables"; version="0.0.3"; sha256="0xfwikz9f58pw1j5vp45wp44lbr8b8ijlac474nzahq46d411afp"; depends=[chron data_table]; }; Tides = derive2 { name="Tides"; version="2.1"; sha256="0da3z010ali83qf8mf1znicqv8vvsa5r93mc40ax60ln2w33nlrm"; depends=[]; }; + TidyMultiqc = derive2 { name="TidyMultiqc"; version="0.1.0"; sha256="0m2f22glndia57vbr4j7xzr6m8xnwyq3qr624x1wl33a13izfzl8"; depends=[assertthat dplyr HistDat jsonlite magrittr purrr rlang stringr tibble]; }; TileManager = derive2 { name="TileManager"; version="0.4.0"; sha256="0kc3wgk5n8cxg901c19fjfzq7na46jq0x3gy22fi4jccjb0vgv0v"; depends=[APfun raster rgeos sp XML]; }; TimeProjection = derive2 { name="TimeProjection"; version="0.2.0"; sha256="04yr4cg2khkw9n3y3qk0ni1327k4pxm09zz2xg8mpjdvgi4p9yi3"; depends=[lubridate Matrix timeDate]; }; TimeSeries_OBeu = derive2 { name="TimeSeries.OBeu"; version="1.2.4"; sha256="0ihigrbdkfbqqjxqfx3y5q8ii8n60301s7190jr50a88l1xzgmh8"; depends=[forecast jsonlite locfit trend tseries]; }; TimeVTree = derive2 { name="TimeVTree"; version="0.3.1"; sha256="124kg9zcq4b2j4qvg9f6gykbmzf69qjnnw54nv213ip2h4rdkv32"; depends=[survival]; }; TimeWarp = derive2 { name="TimeWarp"; version="1.0.15"; sha256="1v6f6d1h9dc8npdy0ph5hhc4jjkzh8kac48lz4ahgngi9n0xwql9"; depends=[]; }; - Tinflex = derive2 { name="Tinflex"; version="1.5"; sha256="15nbzr3q8rfrqywvlqi48r30fgq4lhlhp1fbnf12j49k6q2aixb1"; depends=[]; }; + Tinflex = derive2 { name="Tinflex"; version="1.7"; sha256="0cr65jhdk69lcrivazkr95krzmzmjkc7cxgdn1waw0lmp278dr4w"; depends=[]; }; TipDatingBeast = derive2 { name="TipDatingBeast"; version="1.1-0"; sha256="07lw6jnr76qrxwrwv90hi5ih2xf6g4sz4hfapk5vf1y3ayfskkl0"; depends=[DescTools mclust TeachingDemos]; }; - Tlasso = derive2 { name="Tlasso"; version="1.0.1"; sha256="0flx4l7q3qndp77349ayfrszyim7mvs7yfvv3j9a1mhf3gdn9j14"; depends=[expm huge igraph rTensor]; }; TmCalculator = derive2 { name="TmCalculator"; version="1.0.1"; sha256="1h1dk4kq6zi3a9wi6bxsqz3b9jk740811dp65sb6lqc668xy5mps"; depends=[]; }; Tmisc = derive2 { name="Tmisc"; version="1.0.0"; sha256="1zs7zxawl13pils9hff0i5aplxy32ccp27jcmjdh39lgf083s3v3"; depends=[dplyr magrittr rstudioapi tibble]; }; TooManyCellsR = derive2 { name="TooManyCellsR"; version="0.1.1.0"; sha256="0cypjf4a9q2kw4gwxlr59nbwn25wrrhrcmpksxi2yhd3qhk71q8n"; depends=[cowplot ggplot2 imager jsonlite Matrix]; }; ToolsForCoDa = derive2 { name="ToolsForCoDa"; version="1.0.5"; sha256="0pg8ymim9pbbmnqnvws1v7g874mv65s1idb4m7dcy800v63pzq7s"; depends=[calibrate MASS robCompositions]; }; TopKLists = derive2 { name="TopKLists"; version="1.0.7"; sha256="0xwp926l8mr0j3lfxy2077d1qs150iid6v7i7015wqzif948jkxz"; depends=[gplots Hmisc]; }; TopicScore = derive2 { name="TopicScore"; version="0.0.1"; sha256="1x6s3yn25rj8mbd25yi7f2rz0nwg8n0l1vs6r250kyjb17d2javm"; depends=[combinat Matrix quadprog RSpectra slam]; }; - TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="1.0.1"; sha256="0yc21vs10rzmwx0z6d0gyyncr25835vb7wpn392csc5big6d73xc"; depends=[memoise]; }; + TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="2.0.0"; sha256="1mk538iw08wxbspr1pn4dmmp4hki3glnpwpwz9idz2l1cik7zri4"; depends=[TreeTools]; }; TouRnament = derive2 { name="TouRnament"; version="0.2.5"; sha256="09i0frzzxi5ymjlvh81rmisxh35amrvhxbkjq5351fhlpf1n977z"; depends=[]; }; - Tplyr = derive2 { name="Tplyr"; version="0.2.2"; sha256="0bqwp27qqnjidc816bw96whlrrfmd8iph0mhb3pgd0gxmvxpj4bj"; depends=[assertthat dplyr forcats lifecycle magrittr purrr rlang stringr tibble tidyr tidyselect]; }; + Tplyr = derive2 { name="Tplyr"; version="0.4.0"; sha256="17phnsbhbgw8r3j5gk18rc9651azb3365azdljfprc6yp29cd883"; depends=[assertthat dplyr forcats lifecycle magrittr purrr rlang stringr tibble tidyr tidyselect]; }; TraMineR = derive2 { name="TraMineR"; version="2.2-1"; sha256="0varwhc2jvmj36x6vslhfmqwms7zzs4p32ciaqh214i9pc93czhl"; depends=[boot cluster colorspace Hmisc RColorBrewer]; }; - TraMineRextras = derive2 { name="TraMineRextras"; version="0.6.0"; sha256="00g0as69v92azajbcbkhr6lwihlphzpb41la5wz2lfvshq5ywqz1"; depends=[cluster gtools RColorBrewer survival TraMineR]; }; + TraMineRextras = derive2 { name="TraMineRextras"; version="0.6.1"; sha256="1dz9k2v420v8z83zd8xb4wf2yd0gi99vvmva3ymq7mdm7bj3q3vw"; depends=[cluster colorspace doParallel foreach gtools RColorBrewer survival TraMineR]; }; TrackReconstruction = derive2 { name="TrackReconstruction"; version="1.2"; sha256="1kpdiwwzxsdwv5255xlvcnxvnp39ky0aws41g1l5i7cpbv88kca5"; depends=[fields RColorBrewer]; }; Trading = derive2 { name="Trading"; version="2.1"; sha256="08vhcf3hl3b8pczaawf25vl6j2ap8zbmwdxxdi2g05hq05lywwf9"; depends=[PerformanceAnalytics reticulate]; }; TrafficBDE = derive2 { name="TrafficBDE"; version="0.1.0"; sha256="1lnh9lbjxaradivnd1dkd2szggjh2r4v7klpyxb862dxsmdxxrqw"; depends=[caret data_table dplyr lubridate neuralnet RCurl zoo]; }; - TraitStats = derive2 { name="TraitStats"; version="1.0.0"; sha256="0as86h5zgbd39fdk6ip1b51ln3bpybw3j57kiqr4y6p62cl3sgl9"; depends=[gridExtra lattice qpdf rlist]; }; + TraitStats = derive2 { name="TraitStats"; version="1.0.1"; sha256="00la8ix8wskn1354anx0zd70q1rj65a3407sq25b04hif340liyg"; depends=[gridExtra lattice qpdf rlist]; }; TrajDataMining = derive2 { name="TrajDataMining"; version="0.1.6"; sha256="1n5qcyc1kb8rdrqaji7pp63l2gyr6jim8spm8ydb4lnqfcnrin9g"; depends=[geosphere rgdal RPostgreSQL sp spacetime trajectories xts]; }; TransModel = derive2 { name="TransModel"; version="2.1"; sha256="0brlr4w5k8xsgbrizm7ha0cmq0kqzd2fcjpszq7gym844jj93csi"; depends=[MASS survival]; }; TransP = derive2 { name="TransP"; version="0.1"; sha256="0p6pfcp8qjdah0lfhx0a396nxjzp3ckpda9hl3snpppx79iyww55"; depends=[]; }; - TransPhylo = derive2 { name="TransPhylo"; version="1.4.4"; sha256="1506c97y8dnhd0c38rgvmg70q0l3xmmn07mjglhnw7hi5n5y9mv9"; depends=[ape Rcpp]; }; + TransPhylo = derive2 { name="TransPhylo"; version="1.4.5"; sha256="0g92kwi1nlmpc8m4pc9kv9xhczryr2kn9icfr3js7da7vy8g50xy"; depends=[ape Rcpp]; }; TreatmentSelection = derive2 { name="TreatmentSelection"; version="2.1.1"; sha256="1pw64hx697jg2f1r2zd8y98g3ivj2gm8fnixcjfn4drsd0xixb4p"; depends=[binom ggplot2 survival]; }; - TreeBUGS = derive2 { name="TreeBUGS"; version="1.4.5"; sha256="1977p6lbb29w0cg5lpa5dyig7k3j6i2rd5jwr5bv6hwaq6yqsyrg"; depends=[coda hypergeo logspline MASS Rcpp RcppArmadillo rjags runjags]; }; + TreeBUGS = derive2 { name="TreeBUGS"; version="1.4.7"; sha256="0cwhgphdk0zndnqx0qcq42zajhwvgs9myg9dmm6dnp0ik0g5syqa"; depends=[coda hypergeo logspline MASS Rcpp RcppArmadillo rjags runjags]; }; TreeDep = derive2 { name="TreeDep"; version="0.1.3"; sha256="0ja2hp9sxzybac6dqdsns5q1rj12swl240znsnsffg9mkvzhq6rl"; depends=[ggplot2 lubridate]; }; - TreeDiagram = derive2 { name="TreeDiagram"; version="0.1.0"; sha256="0lrdhrvy1nfvsmv7immg1b0pgb81n4ksbq4ybjl5n3dzawfizrnm"; depends=[ape cowplot ggplot2 spatstat stringr tree]; }; - TreeDist = derive2 { name="TreeDist"; version="1.2.1"; sha256="07j44jdf0zni5sb3z5j7d9k2622wirs1inw5gnibr90lh6747kq0"; depends=[ape colorspace memoise phangorn Rcpp Rdpack TreeTools]; }; - TreeLS = derive2 { name="TreeLS"; version="2.0.2"; sha256="1q10i7ym9c3ggslyccfl0q67hwbcag2bhn587j29q80g0sw30klq"; depends=[benchmarkme BH data_table deldir dismo glue lidR magrittr mathjaxr nabor raster Rcpp RcppArmadillo RcppEigen rgl rlas sp]; }; + TreeDiagram = derive2 { name="TreeDiagram"; version="0.1.1"; sha256="03kn9h37wgx300szzxmg21zc5iz3a9v8f2ydzv6dv6rhpa7yn0v5"; depends=[ape cowplot ggplot2 stringr tree]; }; + TreeDist = derive2 { name="TreeDist"; version="2.0.3"; sha256="1b10jd4z5lv8lml5ab9h6cgxw8vcjgz9fd2aw2jlkrymjfm9bnri"; depends=[ape colorspace memoise phangorn Rcpp Rdpack shiny shinyjs TreeTools]; }; TreePar = derive2 { name="TreePar"; version="3.3"; sha256="1sm518b1b4b1p0n5979qzvi2nacxpp3znbg9n75pf2a8z8wy6p4l"; depends=[ape deSolve Matrix subplex TreeSim]; }; TreeSearch = derive2 { name="TreeSearch"; version="0.4.3"; sha256="0g5fdmadhpqq2cs5ss75008v6qrd77hppsqrbvbk46y2g83kn0bq"; depends=[ape phangorn R_cache Rdpack TreeTools]; }; TreeSim = derive2 { name="TreeSim"; version="2.4"; sha256="0nmzx2723n1f5lr951zz2ih2gnpfim5qzihlayhpf181z1qijv93"; depends=[ape geiger]; }; TreeSimGM = derive2 { name="TreeSimGM"; version="2.5"; sha256="125c9rim272h0dfyygmmijz8dcnch3g9wy1ngki77dyrmdl77yfx"; depends=[ape TreeSim]; }; - TreeTools = derive2 { name="TreeTools"; version="1.4.1"; sha256="1yx54kd39cj1vl33ydv2ibpkqrgcw4q7nkg1rjz4ksxa9as2n99d"; depends=[ape bit64 colorspace phangorn R_cache Rcpp Rdpack]; }; + TreeTools = derive2 { name="TreeTools"; version="1.4.4"; sha256="0q2figlkfd7a892s06fnwq62v5p64rnjjd3a25g448b361ymmch9"; depends=[ape bit64 colorspace phangorn R_cache Rcpp Rdpack]; }; TrendInTrend = derive2 { name="TrendInTrend"; version="1.1.3"; sha256="0ijkijyhxhjc7202qssa9wnrmwgv4miv5n8jbml4qqj80kcsbdwp"; depends=[nleqslv pracma pROC rms]; }; TrendSLR = derive2 { name="TrendSLR"; version="1.0"; sha256="1x8j2dg3m7b22gva33y4s318a41wl60sz93y868z4j65hp13jb5k"; depends=[changepoint forecast imputeTS plyr Rssa tseries zoo]; }; + Trendtwosub = derive2 { name="Trendtwosub"; version="0.0.2"; sha256="12ibxxq58h9w7hlrsxwdirh02casj495rxbfknaggwfx3w30nm56"; depends=[magrittr usethis]; }; + TriDimRegression = derive2 { name="TriDimRegression"; version="1.0.0.0"; sha256="0kfz72733wji31r7khx7jl97ybdf1x3brnjd6af3lw48a4awk17l"; depends=[bayesplot BH dplyr Formula future glue loo purrr Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders tidyr]; }; TriMatch = derive2 { name="TriMatch"; version="0.9.9"; sha256="17v8hdm594i9qs5hvrzb1k94wrzvx07479rmvbk4314fim27mabg"; depends=[ez ggplot2 gridExtra PSAgraphics psych randomForest reshape2 scales]; }; TriadSim = derive2 { name="TriadSim"; version="0.2.0"; sha256="12dpndq09blx1n57vpps646qmxzlz22987729brgxgdg69z0259s"; depends=[doParallel foreach snpStats]; }; TrialSize = derive2 { name="TrialSize"; version="1.4"; sha256="0k162n3jr2ixdl3pp90izdr83z14hj70jb9mrfw3iqz0pczp2cpj"; depends=[]; }; TrioSGL = derive2 { name="TrioSGL"; version="1.1.0"; sha256="0xzyv1vppw0v1xjpf83nnv1sx1xy7197ay6l7dzvr0vllappdam9"; depends=[]; }; TripleR = derive2 { name="TripleR"; version="1.5.3"; sha256="13s1vlmr4sqa2sq2fbcld86bh3g73yb204aawbks11rjblwzvb0h"; depends=[ggplot2 plyr reshape2]; }; TropFishR = derive2 { name="TropFishR"; version="1.6.2"; sha256="1mmb573gf82rxsvrjal4iy5f5gjhjaws6kcabnhhp6cn5ainl64r"; depends=[doParallel GA GenSA Hmisc MASS msm propagate reshape2]; }; + TrtCombo_FactorialExp_SR = derive2 { name="TrtCombo.FactorialExp.SR"; version="4.0.4"; sha256="1kc5nqivsia801hdll5zcl4w6ayx7pabx7xz70l75h1f966ahnr7"; depends=[]; }; TruncatedNormal = derive2 { name="TruncatedNormal"; version="2.2"; sha256="0zfq6y0d7ydj7mzwmnd6fvy4nk8pd7cs5n1xlysrz5378zjnkw0p"; depends=[alabama nleqslv randtoolbox Rcpp RcppArmadillo]; }; Tsphere = derive2 { name="Tsphere"; version="1.0"; sha256="0xgxw2hfj40k5s0b54dcmz7savl8wy4midmmgc7lq4pyb8vd58xx"; depends=[glasso rms]; }; TukeyC = derive2 { name="TukeyC"; version="1.3-3"; sha256="0bdnfr44hk4c1yh7i9ya95gwbwnplj3hf0k0pl1wm4ghiav39vcq"; depends=[doBy]; }; + TukeyRegion = derive2 { name="TukeyRegion"; version="0.1.4"; sha256="1zx6gm0s0nardhb3xm3c53pd46kq6grsknpldnjjfhn3029a3nr7"; depends=[bfp BH ddalpha MASS Rcpp rgl Rglpk]; }; TunePareto = derive2 { name="TunePareto"; version="2.5"; sha256="0v1ylh4m5s80zp346pxxlvhm5070w83mlzfxjyp4n000c8r2nkf4"; depends=[]; }; TurtleGraphics = derive2 { name="TurtleGraphics"; version="1.0-8"; sha256="0h77pj7rs3lrqi1y2dm1cbrmj13mjpq6y5nw8bcq0s2kbnkfw67l"; depends=[]; }; Tushare = derive2 { name="Tushare"; version="0.1.3"; sha256="12aabkwlifc82yiym3yijpfpjhmhfwpw8mz4fb11qm6n4igr1yhg"; depends=[data_table forecast httr tidyverse]; }; TwitterAutomatedTrading = derive2 { name="TwitterAutomatedTrading"; version="0.1.0"; sha256="1aa6fxxvy0s8al30w19wa2pwzp60zbbdvp5myigv8x26k6w2jwgv"; depends=[curl dplyr jsonlite lubridate magrittr naptime plyr purrr tibble tidytext twitteR]; }; - TwoArmSurvSim = derive2 { name="TwoArmSurvSim"; version="0.1"; sha256="0hxasvahllq88zl2k0p41ra5d2wzsxpn95sqf9cmc1rgbvm1q57z"; depends=[blockrand dplyr survival]; }; + TwoArmSurvSim = derive2 { name="TwoArmSurvSim"; version="0.2"; sha256="0isb1nmm6hxwn6p52an1axj30ilkr5c8xi86zx2b8acivdz2xr12"; depends=[blockrand dplyr simsurv survival]; }; TwoCop = derive2 { name="TwoCop"; version="1.0"; sha256="1ycxq8vbp68z82r2dfg2wkc9zk3bn33d94xay20g2p55lnzl2ifd"; depends=[]; }; TwoPhaseInd = derive2 { name="TwoPhaseInd"; version="1.1.1"; sha256="0xsqiq4x7vmhif9j8zi1smbchwm4fsbgb10i4vxi0biijybizk9z"; depends=[survival]; }; TwoRegression = derive2 { name="TwoRegression"; version="0.1.2"; sha256="0qr9zrfmbh4c4207gvwa384q5njjx6nsl6lc58d25m8bkfalifpi"; depends=[data_table dplyr magrittr seewave]; }; TwoSampleTest_HD = derive2 { name="TwoSampleTest.HD"; version="1.0"; sha256="0xdib7hwbpy549pxihai8dpy91h94wwl3b76jn7p0m15ky7z18df"; depends=[]; }; TwoStepCLogit = derive2 { name="TwoStepCLogit"; version="1.2.5"; sha256="050y7na91izg36gkwd8yn8rx3r39dk6qlvhd3137f3jnk4v00bck"; depends=[survival]; }; UBCRM = derive2 { name="UBCRM"; version="1.0.1"; sha256="1h9f8wlxdgb67qqqnfhd9gfs4l2cq84vajhcb0psva0gwdd1yf6i"; depends=[]; }; - UBL = derive2 { name="UBL"; version="0.0.6"; sha256="0238irg7r3g248h4x4bdb308wvfqq99hwykywf4k2bssdd25kwjk"; depends=[automap gstat MBA randomForest sp]; }; + UBL = derive2 { name="UBL"; version="0.0.7"; sha256="1zppc8mgmj4ymxfdvhqiirlf80wh65y58wqm92fgjdn7s06v5skf"; depends=[automap gstat MBA randomForest sp]; }; UCR_ColumnNames = derive2 { name="UCR.ColumnNames"; version="0.1.0"; sha256="1nwwq93f60r9aik51l7mzckg81f81nz5kgzynyzp5sm4y2wmpzwn"; depends=[]; }; UCSCXenaShiny = derive2 { name="UCSCXenaShiny"; version="0.5.0"; sha256="0rilgngbfh4ignlzm5l6z9mwjngwmhlj9dvaknf8rg9a4g67vgqz"; depends=[dplyr DT ggplot2 ggpubr magrittr plotly RColorBrewer shiny shinyBS shinyjs shinythemes shinyWidgets tibble UCSCXenaTools zip]; }; - UCSCXenaTools = derive2 { name="UCSCXenaTools"; version="1.3.6"; sha256="031r2p22hj2ivq4z9c43b2aa6cwmby54lrnnjy7fr98h4ykb2658"; depends=[dplyr httr jsonlite magrittr readr rlang]; }; - UComp = derive2 { name="UComp"; version="2.1"; sha256="0l6gn1i6b2ap9ngm6dyrsxs2h59p4yvxqgmqns68wp1iy5zkfdjk"; depends=[Rcpp RcppArmadillo]; }; - UKFE = derive2 { name="UKFE"; version="0.1.2"; sha256="1v4sjdrzrmi1azn89pwpshfvwxyhkixf3vvmz7xcybzhlrlw13lf"; depends=[]; }; + UCSCXenaTools = derive2 { name="UCSCXenaTools"; version="1.4.4"; sha256="1311ah8xixfn776y418xkz9284jd7clhv28vw4hap2m9vca453qy"; depends=[dplyr httr jsonlite magrittr readr rlang]; }; + UComp = derive2 { name="UComp"; version="2.1.2"; sha256="1v4hwdhpjf4bi6zbf0jykqxx3kq97h7kw355lp66f613haszzn2p"; depends=[Rcpp RcppArmadillo]; }; + UKFE = derive2 { name="UKFE"; version="0.1.6"; sha256="13amx1757spll37nsd84dflz888y47q92xnf26r6qd3vshy668dp"; depends=[]; }; UKgrid = derive2 { name="UKgrid"; version="0.1.3"; sha256="1x44iry2j5qbvd8ac9rv9dmg60hbhry2v4jj9hmm49bx10iwl9h2"; depends=[data_table dplyr lubridate magrittr tsibble xts zoo]; }; UMR = derive2 { name="UMR"; version="1.0.0"; sha256="12xwv39p3ry8ijf9z8px9vvwd48pnda24cnp0y9qfhqp9iy3r083"; depends=[decon]; }; UNCLES = derive2 { name="UNCLES"; version="2.0"; sha256="0c61sm09dh0yfrjrjjnizg7qrf8xgc1zdldwhjh64kq8k8g5wa69"; depends=[class kohonen pdist]; }; UNF = derive2 { name="UNF"; version="2.0.6"; sha256="0sr740dhfp7z9wvhajww43g5gz79x5y5dbflw5a813jgmiqm1jyq"; depends=[base64enc digest]; }; UNPaC = derive2 { name="UNPaC"; version="1.1.0"; sha256="12w6vjvkzivnqa6jd75dwr8h8d8xbc2519pqnqw9fk3yanqzx9rk"; depends=[huge PDSCE]; }; + UPCM = derive2 { name="UPCM"; version="0.0-3"; sha256="1apah04qdgvxxf6q6xr53716pcrmds86sn8f7ykxj93ggg8k0bvl"; depends=[cubature ltm mvtnorm numDeriv Rcpp RcppArmadillo statmod]; }; + UPG = derive2 { name="UPG"; version="0.2.2"; sha256="01w54qbbyiwlw1dymi5gmxd26vds1am7r32p3gpq2ybfghk9kxbw"; depends=[coda ggplot2 knitr matrixStats mnormt pgdraw Rcpp RcppArmadillo RcppProgress reshape2]; }; UPMASK = derive2 { name="UPMASK"; version="1.2"; sha256="160rsb0nbndf61khcs3s8xv9nj7ln8zl6l11157ywdcjqd2q5qnq"; depends=[DBI dimRed loe MASS RSQLite]; }; UPSvarApprox = derive2 { name="UPSvarApprox"; version="0.1.2"; sha256="0kgbpk2wc7zsiln7301z8fa1fp4911kpg1zfpjyfw3cv7dqaznv2"; depends=[]; }; USAboundaries = derive2 { name="USAboundaries"; version="0.3.1"; sha256="1mqbxkv347307mbvn70929bi3l8wmiwrp86rxdgy45g2ddjdcb6s"; depends=[]; }; - USP = derive2 { name="USP"; version="0.1.1"; sha256="1y3argx05bw99lwk94h7h62c5k7xnysdmj1qil38b71psl0ndh88"; depends=[Rdpack]; }; + USP = derive2 { name="USP"; version="0.1.2"; sha256="1fngs82r1xbym8qa1lj9jv1i57r3nx9rr093nfpjl82f7r0kr3sn"; depends=[Rdpack]; }; UScancer = derive2 { name="UScancer"; version="0.1-2"; sha256="0p1kxw1phqq598ljk3njznc9kmgscc8gmwdrvx1scba9rr6n61kl"; depends=[rgdal]; }; UScensus2000cdp = derive2 { name="UScensus2000cdp"; version="0.03"; sha256="143hqnzdla3p31n422ddzaaa34wc6xnnhil4y53m4qydyg407700"; depends=[foreign maptools sp]; }; UScensus2000tract = derive2 { name="UScensus2000tract"; version="0.03"; sha256="11ppw75k8zghj7xphx5xyl3azsdsyd142avp0la2g941w6f8l2n1"; depends=[foreign maptools sp]; }; UScensus2010 = derive2 { name="UScensus2010"; version="0.11"; sha256="1q06spkh8f4ijvfg557rl3176ki4i8a1y39cyqm3v7mnzwckyj3l"; depends=[foreign maptools sp]; }; USgas = derive2 { name="USgas"; version="0.1.0"; sha256="0ym75xzbiw0pmnpzkw107rjwa0fjia1fa3ldq6yhsqkr275qmx2r"; depends=[]; }; - USgrid = derive2 { name="USgrid"; version="0.1.1"; sha256="09msy7bsy4jsba94x7vqzlid9bvn1s7871500ri2aw496mjw1q8w"; depends=[tsibble]; }; + USgrid = derive2 { name="USgrid"; version="0.1.2"; sha256="0babwjnbdyfa2cf65gn08nzy1bs92i56lnhpx558yn0dyk75cz5s"; depends=[tsibble]; }; UStatBookABSC = derive2 { name="UStatBookABSC"; version="1.0.0"; sha256="16r6clhfaalfsg5hmvzm8a128zygxax5hyc0vr1q9bsw9hj7cs0c"; depends=[]; }; UWHAM = derive2 { name="UWHAM"; version="1.0"; sha256="1qaj8anaxqnx4nc6vvzda9hhhzqk9qp8q7bxm26qgia4hgascnrv"; depends=[trust]; }; UdderQuarterInfectionData = derive2 { name="UdderQuarterInfectionData"; version="1.0.0"; sha256="084bq5ai1ccp4www64z0ipic74zkd8j1ygv0py900164a25wdr9b"; depends=[]; }; @@ -5024,54 +5200,59 @@ in with self; { Umoments = derive2 { name="Umoments"; version="0.1.1"; sha256="089d0xmsp0419mxjp6fs0s1palvdkr0i5dzqckcn6r2kjqj7izjg"; depends=[]; }; Umpire = derive2 { name="Umpire"; version="2.0.10"; sha256="1bhz1yfvpszqz4nal2wwjgllbq0hj6y0jf2bja3nfb7amj2m10gg"; depends=[BimodalIndex mc2d]; }; UncDecomp = derive2 { name="UncDecomp"; version="1.0.1"; sha256="1m44pgk7nffay09m4gkwb0khq0qjd7bq1p72blsmib46wmnwqfsa"; depends=[dplyr ggplot2]; }; - UncertainInterval = derive2 { name="UncertainInterval"; version="0.6.0"; sha256="0gyw1lgq1mni8m44lfi2vnd2wxq6i6ml6c6hy9amdbwmb7aymhhd"; depends=[car MASS nloptr psych reshape2 rootSolve zoo]; }; - UniDOE = derive2 { name="UniDOE"; version="1.0.2"; sha256="14jz4acrvbv59sbr7gya8g0z749vv0i04gl5wl0y4218byjvw6bs"; depends=[Rcpp]; }; + UncertainInterval = derive2 { name="UncertainInterval"; version="0.7.0"; sha256="1lywwjkbmlbxhp2ahmsw2f47i0p848cky7xx1lxrg5ydfzq9kzl5"; depends=[car MASS nloptr psych reshape2 shiny zoo]; }; UniIsoRegression = derive2 { name="UniIsoRegression"; version="0.0-0"; sha256="0lmrmb9sbk41ak7sbcrzhfnijb1skgb4lqg9m9imc98lcp69h7z0"; depends=[Rcpp]; }; Unicode = derive2 { name="Unicode"; version="13.0.0-2"; sha256="08af3j06npj37z0bcgpqdcya07d1ribll9izkir2fcyw61zs65qy"; depends=[]; }; UnifiedDoseFinding = derive2 { name="UnifiedDoseFinding"; version="0.1.7"; sha256="1kapm7vwsn1a0prjplbd1im480dy6l02vsil82qxbhamvnc8his2"; depends=[]; }; - UniprotR = derive2 { name="UniprotR"; version="2.0.1"; sha256="1l42nf0jk6gk723zrkhmjh7w9zzlalvxhdhd778iwsrgjcnd8642"; depends=[alakazam curl data_tree dplyr ggplot2 ggpubr gprofiler2 gridExtra htmlwidgets httr magick magrittr networkD3 plyr qdapRegex ReactomePA scales stringr tidyverse]; }; + UniprotR = derive2 { name="UniprotR"; version="2.0.6"; sha256="1hvfbg2bj2j27qp1d0y5j49yh9zmq5gbgg2187nnysvl5c7zpdgf"; depends=[alakazam curl data_tree dplyr ggplot2 ggpubr gprofiler2 gridExtra htmlwidgets httr magick magrittr networkD3 plyr qdapRegex scales stringr tidyverse]; }; UnitCircle = derive2 { name="UnitCircle"; version="0.1.3"; sha256="0z5ssps8l5ka4aw4984qml15scw4pfssara5dls82afhfhpkszsr"; depends=[]; }; - UnivRNG = derive2 { name="UnivRNG"; version="1.2.2"; sha256="1hv0gg371ndljvn3x7s5vbkh51h1l1pjk57livw630mvb67cffqw"; depends=[]; }; + UnivRNG = derive2 { name="UnivRNG"; version="1.2.3"; sha256="14z2yqv14sv16ycf7jf2kkp8pqn12d9lq4l568vmdm10qrl5x39d"; depends=[]; }; UpSetR = derive2 { name="UpSetR"; version="1.4.0"; sha256="007i0njnjjy7vbrxabwav7a1kk2n0hn2mkvqsdzzfk10ckp5y7im"; depends=[ggplot2 gridExtra plyr scales]; }; UsingR = derive2 { name="UsingR"; version="2.0-6"; sha256="1lr8z45r5s7fxrd42rswm6w7s3k5nds244b9d525jb5v4n8w9kpw"; depends=[HistData Hmisc MASS]; }; UtilityFrailtyPH12 = derive2 { name="UtilityFrailtyPH12"; version="1.0"; sha256="06f5gmwwk1r14ab6v5jcxz0pmdph7ffi4y57mjg9byn7pjnibflk"; depends=[bindata mvtnorm Phase123 Rcpp RcppArmadillo]; }; - V8 = derive2 { name="V8"; version="3.4.0"; sha256="1g9z22pc8ydx1yhv57ww2d2jg5hvrl7ilwa79x89zgn17jha5j7m"; depends=[curl jsonlite Rcpp]; }; + V8 = derive2 { name="V8"; version="3.4.2"; sha256="1vfj89shfzx7b6papi2y671l8gksng775kilmqzl5gx87i3l61i1"; depends=[curl jsonlite Rcpp]; }; VALERIE = derive2 { name="VALERIE"; version="1.1.0"; sha256="15z8234jhh7hv3gijrvy8hap6gdgvm6qll9b00qbji7vyc3dg4pg"; depends=[GenomicAlignments GenomicRanges ggplot2 ggplotify ggpubr IRanges pheatmap plyr Rsamtools scales]; }; + VAM = derive2 { name="VAM"; version="0.5.2"; sha256="1rykyp1f6hxn1r879jrg108aply14vpmvjrv2wxlci0fg2y8krq5"; depends=[MASS Matrix]; }; VAR_etp = derive2 { name="VAR.etp"; version="0.7"; sha256="0py5my3ilhcmz44m15hh0d219l9cz7rda4a9gbmf8wh9cgvvj1s3"; depends=[]; }; + VARMER = derive2 { name="VARMER"; version="1.0.0"; sha256="0qym31jpmb2dyrqsk1s6wp1c3b15mf79lrrk46p6hkmdddkxqgnj"; depends=[cluster deldir gstat hydroGOF Metrics pracma raster rgl sf tictoc zoo]; }; VARSEDIG = derive2 { name="VARSEDIG"; version="1.9"; sha256="18j73wm22bjvf2y0c09bfmdyx4x2gd0jhfcqhbk1sgsk24zjr63z"; depends=[]; }; VARshrink = derive2 { name="VARshrink"; version="0.3.1"; sha256="09hysmxxawcbyfx6bia546aqydryl2r5p3ai7bvl6ghdckw5mnpl"; depends=[ars corpcor MASS mvtnorm strucchange vars]; }; VARsignR = derive2 { name="VARsignR"; version="0.1.3"; sha256="09mnf9hvsi4wx1c81yq97mzggwk6s7nka7awrws63icjybqjmra9"; depends=[HI minqa mvnfast]; }; VARtests = derive2 { name="VARtests"; version="2.0.5"; sha256="0gmm2qrrl4v5vx0nhiwq5brvanhybpb2q0zlf4dihramhjjbwyar"; depends=[Rcpp RcppArmadillo sn]; }; VBLPCM = derive2 { name="VBLPCM"; version="2.4.7"; sha256="1z2liriwnpz0n81wfwrm12bac0xdby3bi67j6akq4sqn79y0fnkm"; depends=[ergm mclust network sna]; }; VBTree = derive2 { name="VBTree"; version="0.1.0"; sha256="0g0lyvclnfmd3zc8yhcibhli0hyxrba6wb3hx039fsg80q7y02h4"; depends=[tensorA]; }; + VBsparsePCA = derive2 { name="VBsparsePCA"; version="0.1.0"; sha256="0h1kzz7rjh4wn4nbq1v3r4f6nrmlh0lscww2vwfz886x1w2c9sys"; depends=[MASS pracma]; }; VC2copula = derive2 { name="VC2copula"; version="0.1.1"; sha256="1ylfsszf98b3sp0zr8z67ag8gsa5614ikbv4p1gnhssxrc8s6rwx"; depends=[copula VineCopula]; }; VCA = derive2 { name="VCA"; version="1.4.3"; sha256="0hqvqq8kvqgrli9426x9npy86nzgc3mhfgq45d8vm7ns3fc6zsay"; depends=[lme4 Matrix numDeriv]; }; VDAP = derive2 { name="VDAP"; version="2.0.0"; sha256="134x4aisaim72xkyzb1vb8vhl2m4i12yzh6cj858a1ag7b0ing3n"; depends=[drc ggplot2 reshape2 stringr]; }; VDJgermlines = derive2 { name="VDJgermlines"; version="0.1"; sha256="1aqjhkcj3bd5hk7iz0f2cy5nfp23gvhqsmg6nzlxd9klwc6xpq2h"; depends=[ape stringdist]; }; + VDSM = derive2 { name="VDSM"; version="0.1.1"; sha256="09h09av2yydq1vwd77lgfjjk87432sas60905sxkw0mjixf6hq22"; depends=[dplyr ggplot2 gridExtra knitr plyr viridis]; }; VDSPCalibration = derive2 { name="VDSPCalibration"; version="1.0"; sha256="1hrmmhvk3mhd3bdl0msnm5shcj4cjgd3pn1rkfkv8fh4llqvz7w8"; depends=[]; }; + VEwaning = derive2 { name="VEwaning"; version="1.1"; sha256="176f0y60pcw29iq6rs636mybbnxq9fhgwhsxaykiijz5d0jhkmbn"; depends=[ggplot2 survival]; }; VFP = derive2 { name="VFP"; version="1.3"; sha256="1mkwm1lpxyfarfhsg77ppm55gvsvynqfa8abdsxn5y8w99qb0kmk"; depends=[gnm MASS VCA]; }; VFS = derive2 { name="VFS"; version="1.0.2"; sha256="1b8sl8id2gj4iqkpjzd3giybbix2jvskwsbw1kqj3zqr77hygxwg"; depends=[e1071 nleqslv]; }; - VGAM = derive2 { name="VGAM"; version="1.1-4"; sha256="1iwrpyhz3khgw904zxz3pn7d61zvkd5m22gimzk57f8jjplxh1zm"; depends=[]; }; - VGAMdata = derive2 { name="VGAMdata"; version="1.1-4"; sha256="13j32jjrsya69lnfry2gs27fhdkqc8kwclmvmxx266dnbfc6rw4k"; depends=[VGAM]; }; - VGAMextra = derive2 { name="VGAMextra"; version="0.0-2"; sha256="18k06k32ajf77z9g53vnbzr8pcb41r89bdv05sbcc9r2833bqa9g"; depends=[VGAM]; }; + VGAM = derive2 { name="VGAM"; version="1.1-5"; sha256="1fx123h4x5awzshv0m4jqbbllrdjfpslb2i8gl9phm1y1wahn69h"; depends=[]; }; + VGAMdata = derive2 { name="VGAMdata"; version="1.1-5"; sha256="1n5g2ymcanf6msjix6y9lsff65iq4898zmd5blfj57d2vbp6ibsa"; depends=[VGAM]; }; + VGAMextra = derive2 { name="VGAMextra"; version="0.0-4"; sha256="003wd6j7df356qgz9ix7fwydy4kfvqd7ngn0k7828qpcais9bjcq"; depends=[VGAM]; }; VHDClassification = derive2 { name="VHDClassification"; version="0.3"; sha256="1ij4h3gzxb9mm9q743kc3sg2q609mnqz6mhlrbim1wcjji2b7bv4"; depends=[e1071 lattice]; }; VIF = derive2 { name="VIF"; version="1.0"; sha256="0yvg6ikrcs7mhg0pavhcywrfysv7ylvnhxpc5sam86dbp69flx9x"; depends=[]; }; VIFCP = derive2 { name="VIFCP"; version="1.2"; sha256="0w41k25vss806m5vpwmmcfsmwaixmln0pliql3a6xlwsihha5i34"; depends=[]; }; VIGoR = derive2 { name="VIGoR"; version="1.0"; sha256="1c24s917aafqy46b3xlsw8v3afs11nd5bq83vlygpgnz1612jpga"; depends=[]; }; - VIM = derive2 { name="VIM"; version="6.0.0"; sha256="0ddhca4v912q82rjpf1qld6i6g2c381g0v5b4hbnygr3lm6a7wiv"; depends=[car colorspace data_table e1071 laeken magrittr MASS nnet ranger Rcpp robustbase sp vcd]; }; + VIM = derive2 { name="VIM"; version="6.1.0"; sha256="1a8aw0ysaf0al95m2la2zx1p3g5mnwqx0x30br1s1dqqkfnv57hz"; depends=[car colorspace data_table e1071 laeken magrittr MASS nnet ranger Rcpp robustbase sp vcd]; }; VIRF = derive2 { name="VIRF"; version="0.1.0"; sha256="0bdkmbmkmmj78h9x025qsdzjzcx8xr2s98wlspcsghlz4hxkzcas"; depends=[BigVAR expm gnm ks matlib matrixcalc mgarchBEKK rmgarch]; }; VLF = derive2 { name="VLF"; version="1.0"; sha256="1il8zhm80mc22zj16dpsy4s6s9arj21l9ik0vccyrpnlr8ws3d3l"; depends=[]; }; VLMC = derive2 { name="VLMC"; version="1.4-3-1"; sha256="0cwfpxcj8g68j9z9fl66i0amj8ypf199iv3yyxzsmniqv4w5x4ar"; depends=[MASS]; }; - VLTimeCausality = derive2 { name="VLTimeCausality"; version="0.1.1"; sha256="0l03zxd2s99g8parjka2w5dwmsjp0k6wwag3axhj4qd7x7z0rfyh"; depends=[dtw ggplot2 RTransferEntropy tseries]; }; + VLTimeCausality = derive2 { name="VLTimeCausality"; version="0.1.2"; sha256="063gmc2hnr689wv3b289cy51lbp9n6rl0858aa0s7dkhh57fd5kw"; depends=[dtw ggplot2 RTransferEntropy tseries]; }; VNM = derive2 { name="VNM"; version="7.1"; sha256="19qglcibb7r6jjz0n0piklwfv3hi4jphd6vmyfbm0ccjjkmn5nin"; depends=[Rcpp]; }; VOSONDash = derive2 { name="VOSONDash"; version="0.5.7"; sha256="1qivx5ddl9jsn6q6ic2w8jrczxlx23z087k5arfz2rixgj7rndyg"; depends=[data_table httpuv httr igraph lattice magrittr RColorBrewer shiny SnowballC systemfonts syuzhet textutils tm vosonSML wordcloud]; }; VSURF = derive2 { name="VSURF"; version="1.1.0"; sha256="1azfd4sb89mp27l86k293qj81x94gfiy1ihwnb6c558p8h69xsgf"; depends=[doParallel foreach randomForest ranger Rborist rpart]; }; + VSdecomp = derive2 { name="VSdecomp"; version="0.1.0"; sha256="1n0ia5y9sm7ix57c2pi70x0739snb6bzbzbjvyn170gq15h41s3n"; depends=[ggplot2 Hmisc lfe reshape rlang]; }; VTShiny = derive2 { name="VTShiny"; version="0.1.0"; sha256="1zq6irla3q7hqs8jpjdya7vy3frqrj72rwmd1sgxwrkgpmpxw6x7"; depends=[EnvStats rmarkdown shiny]; }; VTrack = derive2 { name="VTrack"; version="1.21"; sha256="1acf2b8zy72shc4768rhikfa3590h3l3nwk32jk7pwsms0nb87rf"; depends=[checkmate doParallel foreach gdistance gstat Hmisc intervals lubridate plotKML plyr raster sp spacetime XML]; }; VUROCS = derive2 { name="VUROCS"; version="1.0"; sha256="1r4hq7az50v7lbyx5w6b4zs2kwi5cypqn9k6ac4kr8jr3jlyanr3"; depends=[doParallel foreach Rcpp RcppArmadillo]; }; VWPre = derive2 { name="VWPre"; version="1.2.4"; sha256="1hhpqxzh9h5dy45r04l1fa1k4a14s0m6z6fhfg22kpwpryszbc44"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; VaRES = derive2 { name="VaRES"; version="1.0"; sha256="0gw05jiqgirhz3c8skbb07y4h44r6vi68gnd5y7ql455v0c2raza"; depends=[]; }; - VancouvR = derive2 { name="VancouvR"; version="0.1.1"; sha256="1nzjdassan5kh7wk3xf6kry4jifgjn0gan61ibwhyzy1awpcfngv"; depends=[digest dplyr httr purrr readr rlang sf tibble urltools]; }; + VancouvR = derive2 { name="VancouvR"; version="0.1.2"; sha256="06f9q2zfd50f10bwci24lqylb8hfav66r44d849rz6x24hf5ybbx"; depends=[digest dplyr httr purrr readr rlang sf tibble urltools]; }; VarBundle = derive2 { name="VarBundle"; version="0.3.0"; sha256="0jfx9gkb3f29lgc0nrz3xc7m2ham0scx9lay7x5a6ira7crga6cr"; depends=[crayon dplyr glue magrittr R6 stringr tibble]; }; VarED = derive2 { name="VarED"; version="1.0.0"; sha256="16j9p2a143y4hqclsv1mig0fccrzjx2r0lll0wz8isjp9x1wzjv8"; depends=[]; }; VarRedOpt = derive2 { name="VarRedOpt"; version="0.1.0"; sha256="0h44m8850q4aksrqj11yr2a2qj37w8fhv0plpvdzcl087ifyj0g9"; depends=[]; }; @@ -5092,20 +5273,22 @@ in with self; { VetResearchLMM = derive2 { name="VetResearchLMM"; version="1.0.0"; sha256="1a7wm04bsr5shak7l8ypxlhlnx3qkq1jdpjnji1n05p6b00ih9h1"; depends=[ggplot2 lme4 lmerTest multcomp nlme]; }; ViSiElse = derive2 { name="ViSiElse"; version="1.2.2"; sha256="1ay09dahlqnfrgf4gl4s45a4ahrk2xliagxqz5h826w2vzsawqcc"; depends=[chron colorspace ggplot2 Matrix reshape2 stringr]; }; VineCopula = derive2 { name="VineCopula"; version="2.4.1"; sha256="0c6yi6rva1vxc50a9js762cw3ihv1lna7sbgbhshhrhd3bcl15mi"; depends=[ADGofTest lattice MASS mvtnorm]; }; - Visualize_CRAN_Downloads = derive2 { name="Visualize.CRAN.Downloads"; version="1.0"; sha256="0hzq00dbddzwvhryl38sffchxqz52xk8fizsfjgk1xxjr3g8icw4"; depends=[cranlogs htmlwidgets plotly]; }; + Visualize_CRAN_Downloads = derive2 { name="Visualize.CRAN.Downloads"; version="1.0.1"; sha256="0z2v2izn4aj3i6f5gh8r7pkrqpbb82bv9v4s4vqxgm066a51m4p2"; depends=[cranlogs htmlwidgets plotly]; }; + VorteksExport = derive2 { name="VorteksExport"; version="0.1.8"; sha256="0r9wmd9bdarjkqmpwp85xz27nbyhjkcpxm8qb8bqjmxq4nds6nxx"; depends=[]; }; Voss = derive2 { name="Voss"; version="0.1-4"; sha256="056izh1j26vqjhjh01fr7nwiz1l6vwr5z4fll87w99nc5wc4a467"; depends=[fields]; }; VoxR = derive2 { name="VoxR"; version="1.0.0"; sha256="16r9ggc5x889g8rjqvp1q2kgf5asjzhykd1ldjy3ny9m48p501ad"; depends=[circular data_table dplyr fastcluster FNN geometry raster Rfast rgl]; }; - W2CWM2C = derive2 { name="W2CWM2C"; version="2.0"; sha256="139rbbhshiap3iq4s4n84sip3cwwjn2x7lm7kmzwj5glhl5dc6ga"; depends=[colorspace wavemulcor waveslim]; }; + VulnToolkit = derive2 { name="VulnToolkit"; version="1.1.2"; sha256="17v9qaaj105nnr16j83ksyka8qihwww9a6bf8b2jiz62rkdz6y1c"; depends=[plyr XML]; }; + W2CWM2C = derive2 { name="W2CWM2C"; version="2.2"; sha256="0544wnyyv8glv4ljldmaqgynpshd5bvsqwsz9q1071dfshhxki1v"; depends=[colorspace wavemulcor waveslim]; }; W3CMarkupValidator = derive2 { name="W3CMarkupValidator"; version="0.1-6"; sha256="0nfay5nqss3zlw4nikj8h3zzlnjfxjch4pm3qky15qrcigrybrbl"; depends=[curl xml2]; }; WACS = derive2 { name="WACS"; version="1.1.0"; sha256="09fmdlpb99q9dw17lwp0bwpklgvgiqq7bfs9ryx5r54m0niklr9d"; depends=[mclust mnormt mvtnorm tmvtnorm]; }; WARN = derive2 { name="WARN"; version="1.2-4"; sha256="18gfk9vqcqarj7j5i240wqv2dclg3csng4mih5izj40xaaxaf6q5"; depends=[MASS]; }; WCE = derive2 { name="WCE"; version="1.0.2"; sha256="105pwpd9ikm0gwz4r12jl6cgs1riwsk9pn5qk9cn3msgwa0sdynx"; depends=[plyr survival]; }; WCM = derive2 { name="WCM"; version="0.2.2"; sha256="0w1m2vcxc64ksw3dm94wdigil2fpv3cvzyqmkhs2zrfjlgrdchcd"; depends=[pracma raster]; }; WCQ = derive2 { name="WCQ"; version="0.2"; sha256="1yhkr2iazd7lh9r68xz1lh32z6r1sdnmqrjshcrm4rbwai0j3lkr"; depends=[]; }; - WDI = derive2 { name="WDI"; version="2.7.1"; sha256="0yjb3hsq0w6yasw247ygzfhf0293jmmii1i35xi7g0ccz8fs2ax6"; depends=[RJSONIO]; }; + WDI = derive2 { name="WDI"; version="2.7.4"; sha256="153ddpjhi8d88i2p5mrzg9fpg9ixvssg6qfk49y8qsfm3qy2k6pp"; depends=[RJSONIO]; }; WEE = derive2 { name="WEE"; version="1.0"; sha256="0i3h67p72lr708mwdw3rbzr1lqqr8n2dxv7f0bwyqzxv41sx1iz3"; depends=[doParallel foreach quantreg]; }; WEGE = derive2 { name="WEGE"; version="0.1.0"; sha256="17g4cgx0ajgj7lgxzi467cjbmbc47skyarcm88vqjc3i1j55dw12"; depends=[raster sf sp]; }; - WGCNA = derive2 { name="WGCNA"; version="1.69"; sha256="022hkprnrafvggi8pkjffkvk1qlnibmbbxxrni00wkrdbga5589f"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp survival]; }; + WGCNA = derive2 { name="WGCNA"; version="1.70-3"; sha256="1m6b4a2xpb02c1ajndhk8qlqnhwxa7lkkwj6nzv3l618jy1kp15r"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp survival]; }; WGScan = derive2 { name="WGScan"; version="0.1"; sha256="0jma6di9hbdimswdfm58568vahcjy46hbhb78idjsdz4bl9apvq3"; depends=[data_table MASS Matrix seqminer SKAT]; }; WLasso = derive2 { name="WLasso"; version="1.0"; sha256="0q44ljdsqsnnwfnnsmyn3p65inbw0y71v7v5pp7cz2dzbhhpfzpw"; depends=[genlasso ggplot2 MASS Matrix tibble]; }; WLinfer = derive2 { name="WLinfer"; version="1.1.0"; sha256="0vz5vxn4915z5061iczpl51d7vdz28ss6ghfnllrg4lagn4m1mh6"; depends=[bbmle boot cubature goftest LindleyR nleqslv pracma]; }; @@ -5116,14 +5299,15 @@ in with self; { WPKDE = derive2 { name="WPKDE"; version="0.1"; sha256="100vla11fbw16x5n4w4kbslz4n725v4x6j0hrxzrk99ryl0crmf6"; depends=[]; }; WR = derive2 { name="WR"; version="0.1.1"; sha256="153f64b2zsykl5f8iwxlcqby96ag1an4w8lhs7dxx72gy5k4vs6c"; depends=[survival]; }; WRI = derive2 { name="WRI"; version="0.1.0"; sha256="09klq35q1b9c0v86mhx1klqv41jx0saivhh7a8pq7b3b9f8678zb"; depends=[CVXR expm fdadensity fdapace ggplot2 gridExtra locfit locpol modeest mvtnorm Rcpp RcppArmadillo Rfast rlang]; }; - WRS2 = derive2 { name="WRS2"; version="1.1-0"; sha256="1nkqs5nvsk5n7zj3rh19shaf55q9q0kd8v0686vhyv286g71ism7"; depends=[MASS mc2d plyr reshape]; }; + WRS2 = derive2 { name="WRS2"; version="1.1-1"; sha256="0jsl42z4cwabsqs9ayvmkxwszv59bbfp5w3rxy1hyk6xgn8n3i2h"; depends=[MASS mc2d plyr reshape]; }; WRSS = derive2 { name="WRSS"; version="3.0"; sha256="16a7i6glgl5cshsn3w7gxviybmka06ylw5znz94gigyx0vhgv97p"; depends=[GGally ggplot2 Hmisc network nloptr]; }; WRTDStidal = derive2 { name="WRTDStidal"; version="1.1.2"; sha256="1ssrqqf2hypif4nnfyl4lq03glyyg9ry9s14llf1njxamhjggfgg"; depends=[caret dplyr fields foreach forecast ggplot2 gridExtra lubridate purrr quantreg RColorBrewer survival tidyr]; }; - WVPlots = derive2 { name="WVPlots"; version="1.3.1"; sha256="0j93wivnalc558lbz0lnhjsyifw0k2bbqjwqsn34x7j6184y9f49"; depends=[cdata ggplot2 gridExtra mgcv rqdatatable rquery sigr wrapr]; }; + WSGeometry = derive2 { name="WSGeometry"; version="1.1"; sha256="1xicrsqrv5ywfd6yp4l9wjwhcadbpijcs86mfafdpckv16rlkmpr"; depends=[expm imager lpSolve plot3D Rcpp RcppArmadillo RSpectra transport]; }; + WVPlots = derive2 { name="WVPlots"; version="1.3.2"; sha256="07gwb984mmfwi9b7m44d60f787szw089xlvqwclpkpjgz677k1cg"; depends=[cdata ggplot2 gridExtra mgcv rqdatatable rquery sigr wrapr]; }; WWGbook = derive2 { name="WWGbook"; version="1.0.1"; sha256="0q8lnd1fp4rmz715x0lf61py3xw8wg55yq3gvswaqwy68dlqrzjc"; depends=[]; }; WWR = derive2 { name="WWR"; version="1.2.2"; sha256="0ia1dd12r1l08s9nhgvk55jmqwv58jawm25gd2ni6wpa3mcmq02g"; depends=[inline]; }; WaMaSim = derive2 { name="WaMaSim"; version="1.0.0"; sha256="0sa7qd2bpn3sp06mlpissxxkfhg7j1d07nnwlnz7nyg7pivwnpan"; depends=[magrittr]; }; - WaterML = derive2 { name="WaterML"; version="1.9.5"; sha256="0vc4wf9bw3r504w6k9jx0x0s6fz9yjyryjgi7qhgvha02cqn2k03"; depends=[httr XML]; }; + WaterML = derive2 { name="WaterML"; version="1.9.8"; sha256="1cl4dizxfywil3p21638fcwxl6vad303wwjl8w65cgpyn1mpr7s9"; depends=[httr XML]; }; Watersheds = derive2 { name="Watersheds"; version="1.1"; sha256="1gn52nl0rr29pqq94gjasc4fi1kjxlrpjdkgm2x56j5jbd162drk"; depends=[lattice maptools rgeos sp splancs]; }; WaveSampling = derive2 { name="WaveSampling"; version="0.1.1"; sha256="081pqxbrz8vsmjgammh0802frl8lqrw9z1svhdqjc65lqkwghh75"; depends=[Matrix Rcpp RcppArmadillo]; }; WaveletANN = derive2 { name="WaveletANN"; version="0.1.0"; sha256="08qnx0lk2laiyx1q1wxj15j0yic65r7mbhr6lqbdllq30v4dcj88"; depends=[forecast fracdiff wavelets]; }; @@ -5136,7 +5320,7 @@ in with self; { WebPower = derive2 { name="WebPower"; version="0.5.2"; sha256="11255q41zai4q6n2mpk3fzhi2lyyr3g8dxqfajkb93f68m1b38jp"; depends=[lavaan lme4 MASS PearsonDS]; }; WeibullFit = derive2 { name="WeibullFit"; version="0.1.0"; sha256="1a80gcqbmvb1rz2dr2syy16wn6ixjn6l40gayys9zy8302hky9ir"; depends=[e1071 FAdist glue kSamples mixdist optimx R_methodsS3 R_oo sqldf xtable]; }; WeibullR = derive2 { name="WeibullR"; version="1.0.12"; sha256="0rj4q9hd49b914lz8q1d8n96xrl0h29avn95aigb3z7f8knf7g9g"; depends=[Rcpp RcppArmadillo]; }; - WeightIt = derive2 { name="WeightIt"; version="0.10.2"; sha256="124pxnyhylbz5lyk4prdcqwi018a6x1swjgql2rr4nvq7hs5nz88"; depends=[backports cobalt crayon ggplot2]; }; + WeightIt = derive2 { name="WeightIt"; version="0.12.0"; sha256="1x71ifvxl1zn1iaapfz8sscag2h4yim3ycqiink02sy3sfl0hj4n"; depends=[backports cobalt crayon ggplot2]; }; WeightSVM = derive2 { name="WeightSVM"; version="1.7-5"; sha256="02l2iz4p09dmaybp75a4z2lzq3h4dr03xpnr33m7r280lkimz2fx"; depends=[]; }; Weighted_Desc_Stat = derive2 { name="Weighted.Desc.Stat"; version="1.0"; sha256="030i12mnwlj976avvk3grrccgprsckmc35dm2ajwdfc9dijhypnj"; depends=[]; }; WeightedCluster = derive2 { name="WeightedCluster"; version="1.4-1"; sha256="0d239lfigb51ly79aq48xfihmxf07i6qgc64sq94xc29ffjafpkc"; depends=[cluster RColorBrewer TraMineR]; }; @@ -5144,7 +5328,7 @@ in with self; { WeightedROC = derive2 { name="WeightedROC"; version="2020.1.31"; sha256="1f43hwsabciraj1qxfh5wcqnnx1vvcf4pwqs376rcfd9161k15xv"; depends=[]; }; WgtEff = derive2 { name="WgtEff"; version="0.1.2"; sha256="1z8pndv43ssgmzldwaq0088lmf1g2mkmrbmzyaismcpngn9fqxsk"; depends=[]; }; WhatIf = derive2 { name="WhatIf"; version="1.5-10"; sha256="19w5qw123iahrx96379lrx8i7v3x2ck5dhklf58iw0dmj4pfy2kg"; depends=[lpSolve pbmcapply]; }; - WhiteStripe = derive2 { name="WhiteStripe"; version="2.3.2"; sha256="0kzwglaazn820fzxd2g1fsiw2rnq0qxagns8b5mm3inflsgs35ng"; depends=[mgcv oro_nifti]; }; + WhiteStripe = derive2 { name="WhiteStripe"; version="2.4.0"; sha256="08lywd8jwx6cw7dqm7zxj291gifacymlk8ikjad9aw2f9jm6kap0"; depends=[mgcv neurobase oro_nifti]; }; WiSEBoot = derive2 { name="WiSEBoot"; version="1.4.0"; sha256="1fch78884ay7m2gy602k8df78gkvjiwzkjk550w0k4xbv430ld0h"; depends=[FAdist wavethresh]; }; WikidataQueryServiceR = derive2 { name="WikidataQueryServiceR"; version="1.0.0"; sha256="1bl1nbhbmss8cj9ni7plsjs996n4rwqv6h8bh1zj4whs8z4fw50f"; depends=[dplyr httr jsonlite purrr ratelimitr readr rex WikipediR]; }; WikidataR = derive2 { name="WikidataR"; version="1.4.0"; sha256="0ajbizsyk5a7fgbfn26qydxpp5d8qfnlcwbslxrrn913f0yxbcb4"; depends=[httr jsonlite WikipediR]; }; @@ -5160,14 +5344,14 @@ in with self; { WordR = derive2 { name="WordR"; version="0.3.1"; sha256="17g8v3xhdy57y0b95zrakhi0zamqi35v0zcmjpy47xyqyk4b2grs"; depends=[dplyr flextable officer]; }; WorldFlora = derive2 { name="WorldFlora"; version="1.7"; sha256="0vs0g5dg19kn4r7d6j5hbvqwp8fhyax5wkwqs0wjmcln9xidqnjg"; depends=[]; }; WrightMap = derive2 { name="WrightMap"; version="1.2.3"; sha256="0i84xkd1agyp45r84zsk8vvc02ln8qhxvl4n72xjqib12b38kqzl"; depends=[]; }; - WriteXLS = derive2 { name="WriteXLS"; version="6.1.0"; sha256="05p53xxx4ian0hwq81fcxyb90rfnnl9v9y6j6km8ra4adr7f0ag6"; depends=[]; }; + WriteXLS = derive2 { name="WriteXLS"; version="6.3.0"; sha256="0ssjdv7vr66sl1yfg0l38xddrvrfzhf7vdq342izc22bprx9h78b"; depends=[]; }; WufooR = derive2 { name="WufooR"; version="1.0.1"; sha256="0iq1lc1b22zdvclkr4yivxxf8z5mdxik7lx9r3b38h2qy2rckqb2"; depends=[dplyr httr jsonlite]; }; XBRL = derive2 { name="XBRL"; version="0.99.18"; sha256="1bwvxqbxdf1ynz2bv27l86h05h8y19q2li2y79xk819p5nkxq341"; depends=[Rcpp]; }; XHWE = derive2 { name="XHWE"; version="1.0"; sha256="1ca8y9q3623d0vn91g62nrqf3pkbcbkpclmddw5byd37sdrgsi5l"; depends=[]; }; XICOR = derive2 { name="XICOR"; version="0.3.3"; sha256="0xhb58bk3r8spd8ah3r7568np27nlrc18cswcsgavaikjpfda9vr"; depends=[psychTools]; }; XKCDdata = derive2 { name="XKCDdata"; version="0.1.0"; sha256="1lx9frlbc549qrh4d3m79r3l9icfzqkgfgp8raa8x46a2havi0a5"; depends=[assertthat dplyr glue htmltools httr jsonlite magrittr tibble]; }; - XLConnect = derive2 { name="XLConnect"; version="1.0.1"; sha256="0fbfkl26v42bvbz27kjw8cqnq67mwalxqpp5avqjphc17i5a6ylj"; depends=[rJava]; }; - XML = derive2 { name="XML"; version="3.99-0.5"; sha256="19jkpnbjx2ij0h7rxi13sqnjnwsap6wywmd4gnhfnqpic1rrnlk0"; depends=[]; }; + XLConnect = derive2 { name="XLConnect"; version="1.0.3"; sha256="07q6h5z98l3n83r892lxfv96sznyzvlr2i37laq56yhh1cwii036"; depends=[rJava]; }; + XML = derive2 { name="XML"; version="3.99-0.6"; sha256="0qibvacbfm7gl41ylway3vdyi1qbpa211d48rg3k5i30d48rbf58"; depends=[]; }; XML2R = derive2 { name="XML2R"; version="0.0.6"; sha256="0azfh950r2b7ck3n1vzk3mdll7zy844nx3mbk676jxnj8gg7nxk5"; depends=[plyr RCurl XML]; }; XNomial = derive2 { name="XNomial"; version="1.0.4"; sha256="1mwx302576rmsjllbq2clfxilm3hkyp5bw0wmwqbn0kgv5wpy8z6"; depends=[]; }; XR = derive2 { name="XR"; version="0.7.2"; sha256="0j8rkjw9y7mb0yj24nlisfd84148pnnakz8i2y35y2b8gmh5zhvz"; depends=[jsonlite]; }; @@ -5176,7 +5360,7 @@ in with self; { XRSCC = derive2 { name="XRSCC"; version="0.1"; sha256="0hs2whjsd02avaz79zkrd8gjw9qd7l6ysxmhx4w1r7gb1cj9rr7c"; depends=[]; }; XiMpLe = derive2 { name="XiMpLe"; version="0.10-3"; sha256="1j2sg3ik55w81hbs690kfdq5mlsy10mv2r6rfkm63idqxpgv6c0k"; depends=[]; }; Xmisc = derive2 { name="Xmisc"; version="0.2.1"; sha256="11gwlcyxhz1p50m68cnqrxmisdk99v8vrsbvyr7k67f0kvsznzs1"; depends=[]; }; - Xplortext = derive2 { name="Xplortext"; version="1.3.2"; sha256="0vs4nagc7bsjx1m5cww5m2bkv0ay1phdz47070vx5pi6hiwhgaak"; depends=[FactoMineR flashClust flexclust ggdendro ggplot2 gridExtra MASS slam stringi stringr tm]; }; + Xplortext = derive2 { name="Xplortext"; version="1.4.1"; sha256="17s8x31nzp7rv9mxsbkdivglxlslask80n16rvil3841gfhzbs2j"; depends=[FactoMineR flashClust flexclust ggdendro ggforce ggplot2 ggrepel gridExtra MASS slam stringi stringr tm]; }; YPBP = derive2 { name="YPBP"; version="0.0.1"; sha256="1slc7glr4hb0my5zkssprngb6si98npjj33nsbsm0nbm61hnb9n8"; depends=[BH Formula MASS Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; YPInterimTesting = derive2 { name="YPInterimTesting"; version="1.0.3"; sha256="0fca963rsbs9k7ivffsqk4hzap6ll7s709kqs6aby0plghrdla2w"; depends=[MASS Rcpp]; }; YPPE = derive2 { name="YPPE"; version="1.0.1"; sha256="01q0l22nwfpld2wcygk5x28c2c6cv35hxy2fm1azn8bqsv7xy5il"; depends=[BH Formula MASS Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; @@ -5184,13 +5368,14 @@ in with self; { YRmisc = derive2 { name="YRmisc"; version="0.1.6"; sha256="1crms7dqmhj7br1a5p5j0j7p6sdfimnip31207i6g24f9jkkysv1"; depends=[ggplot2 gridExtra]; }; YaleToolkit = derive2 { name="YaleToolkit"; version="4.2.2"; sha256="12wggdyz0wgnmxnqhp8bypyy1x1p50g49fwdzl2l43il44cdyv0g"; depends=[foreach iterators]; }; Yamm = derive2 { name="Yamm"; version="1.3.1"; sha256="0av5q1vx2f8dvxv0br9w65qmw3zr3y4vja45g8qbqyfb3gkfclhn"; depends=[depth interp OjaNP pcaPP]; }; + YatesAlgo_FactorialExp_SR = derive2 { name="YatesAlgo.FactorialExp.SR"; version="4.0.4"; sha256="0jr2q2dla7dpf0ail0l8ar44cnaxrkvqc7cvsrsdgj97hr970lp9"; depends=[lubridate]; }; YieldCurve = derive2 { name="YieldCurve"; version="4.1"; sha256="0w47j8v2lvarrclnixwzaq98nv1xh2m48q5xvnmk7j9nsv2l3p68"; depends=[xts]; }; - YuGene = derive2 { name="YuGene"; version="1.1.6"; sha256="1kv9n82wrms0c4y5fz9ckzhm1a609mnqp0pwvd0fpyscp8krmlpp"; depends=[mixOmics]; }; Z10 = derive2 { name="Z10"; version="0.1.0"; sha256="02kxlzplmss68zj1z97fvpcjyhhpic9hlx8f5j3gqn3m1mqm1dja"; depends=[dplyr lubridate magrittr rjson stringr]; }; ZIBBSeqDiscovery = derive2 { name="ZIBBSeqDiscovery"; version="1.0"; sha256="12g9rga9z6318ni6x6q9hdqlgl93y2xn8vf3gc6sm97fz8pliswx"; depends=[mcc]; }; ZIBseq = derive2 { name="ZIBseq"; version="1.2"; sha256="13rjy4jl9wil6hhpra4qmdis0iyqxchzsf9l7q6r0dz1f7dpd2nq"; depends=[gamlss gamlss_dist nlme]; }; ZIM = derive2 { name="ZIM"; version="1.1.0"; sha256="0scyfjn4ilsvha3x41c3b8bcfi31hlhwm77wn2a8hj5dsvnnmzig"; depends=[MASS]; }; ZIPFA = derive2 { name="ZIPFA"; version="0.8.1"; sha256="134pkdn4slhiv27rdkkmh2z7xch30ns0jhzxgd7r05bky0z1iri1"; depends=[doParallel foreach Matrix optimx trustOptim]; }; + ZIprop = derive2 { name="ZIprop"; version="0.1.0"; sha256="1lmsfy7cm52wq1xmvz8by2955wwg9nb67q9lnl52qq8yvnjf971a"; depends=[data_table purrr rgenoud]; }; ZRA = derive2 { name="ZRA"; version="0.2"; sha256="1sx1q5yf68hhlb5j1hicpj594rmgajqr25llg7ax416j0m2rnagi"; depends=[dygraphs forecast]; }; ZVCV = derive2 { name="ZVCV"; version="2.1.0"; sha256="0np6h6x74kz1x13wmbkkm1wq43d8bnn2khzjc80prqdi6n0m9v8r"; depends=[abind BH dplyr glmnet magrittr mvtnorm Rcpp RcppArmadillo Rlinsolve]; }; ZeBook = derive2 { name="ZeBook"; version="1.1"; sha256="0v98kbz9njjdx60x9dn8hl8mc6x19i5knjyg2gkwfd667yy1rkl6"; depends=[deSolve triangle]; }; @@ -5201,9 +5386,9 @@ in with self; { aCRM = derive2 { name="aCRM"; version="0.1.1"; sha256="0kzp568hd9c9a9qgniia5s5gv0q5f89xfvvwpzb197gqhs3x092v"; depends=[ada dummies kernelFactory randomForest]; }; aGE = derive2 { name="aGE"; version="0.0.9"; sha256="17niwni6sd2mdvhskq6vfwplynh67hwq9ijrlgjvhkcslpb2ilp3"; depends=[MASS nlme survey]; }; aLFQ = derive2 { name="aLFQ"; version="1.3.6"; sha256="0kphpvhz36859f5l0k8mbf59g9871mynbs4ybdi0h5nm2cdjy9vx"; depends=[bio3d caret data_table lattice plyr randomForest reshape2 ROCR seqinr]; }; - aMNLFA = derive2 { name="aMNLFA"; version="0.1"; sha256="0sj6rxsdib5zmz78c94bjdlcdwhfkvbc7sp3pncj6vsvvzgqcjdp"; depends=[devtools ggplot2 gridExtra MplusAutomation plyr reshape2 stringr]; }; aPCoA = derive2 { name="aPCoA"; version="1.2"; sha256="0b5fqxay918if5pfd6xgbzir5myivc3jar2p2is8azrykrr1v2cr"; depends=[ape car cluster randomcoloR vegan]; }; - aRbs = derive2 { name="aRbs"; version="0.0.1"; sha256="0ghd5sr0jrbm9lymhnq4bk6gcqkbak4sjqfjvsk96zp2nyqmhzrw"; depends=[crayon data_table dplyr progress purrr rvest stringr xml2]; }; + aRbs = derive2 { name="aRbs"; version="0.1.3"; sha256="19s4x2w036xllrsarapmp8rvyxcsky82k4h9mfr2rbhdfid6h1f3"; depends=[crayon data_table dlstats dplyr DT ggplot2 lubridate progress purrr rvest shiny shinyBS shinycssloaders shinydashboard stringr xml2]; }; + aRchi = derive2 { name="aRchi"; version="1.0.5"; sha256="1sn321d2qh7vvwfbr62lg3c5ggg8df0w0q6mwcg5pr3jqhiif076"; depends=[circular data_table DiceKriging dplyr FNN gtools lidR pkgcond plyr progress rgl stringr]; }; aRpsDCA = derive2 { name="aRpsDCA"; version="1.1.1"; sha256="0ghg43rd6bnv4jp8pkpd1ixp5l6kq5pr0mxq61q24s24g0m3s64p"; depends=[]; }; aRxiv = derive2 { name="aRxiv"; version="0.5.19"; sha256="0rik0jkh1xi9fizzw46xmcw139g6nla072p7f8jgvzbhp7k58ba2"; depends=[httr XML]; }; aSPC = derive2 { name="aSPC"; version="0.1.2"; sha256="1q301rw7dax5v58srg4jlcam1qq2igkaj7kg8wlnlml0hsck4c4a"; depends=[energy mvtnorm]; }; @@ -5222,9 +5407,11 @@ in with self; { abd = derive2 { name="abd"; version="0.2-8"; sha256="191gspqzdv573vaw624ri0f5cm6v4j524bjs74d4a1hn3kn6r9b7"; depends=[lattice mosaic nlme]; }; abdiv = derive2 { name="abdiv"; version="0.2.0"; sha256="053l94br8sdy30078ssncq5i5zvdxa3m72ymbwbh0cm3zmsljj29"; depends=[ape]; }; abe = derive2 { name="abe"; version="3.0.1"; sha256="1f19h3xzzmjhvwc1rrb8z0rai3ip03y4gdi2gg9bfr5sg2nfklk6"; depends=[]; }; + abess = derive2 { name="abess"; version="0.1.0"; sha256="0cbxydhvrzv9hjacc7gpksfpfkg87wx4phpy36xbfiasx0gr7gpd"; depends=[MASS Matrix Rcpp RcppEigen]; }; abf2 = derive2 { name="abf2"; version="0.7-1"; sha256="0d65mc1w4pbiv7xaqzdlw1bfsxf25587rv597hh41vs0j0zlfpxx"; depends=[]; }; abind = derive2 { name="abind"; version="1.4-5"; sha256="0b1zd8jbnl6l292cr9rb50m09fy3ylxvzkpgi5lfb1nbzddcwfis"; depends=[]; }; abjutils = derive2 { name="abjutils"; version="0.3.1"; sha256="18mmlkqsrjfclk8islfjdsp8sbw6dpjj5x45kqilxdiss69gg5zd"; depends=[dplyr magrittr purrr rlang rstudioapi stringi stringr tidyr]; }; + abn = derive2 { name="abn"; version="2.5-0"; sha256="1fqmhw0mhdl6az1gpg0byvx5snhz1pl3fqikhyfjcjrc9xbsq8yw"; depends=[lme4 nnet Rcpp RcppArmadillo Rgraphviz rjags]; }; abnormality = derive2 { name="abnormality"; version="0.1.0"; sha256="1fzfskl9akl06nliy8hkv2a0pznpj8pwcypg3gj5r2nzvr3kan9v"; depends=[MASS Matrix]; }; abodOutlier = derive2 { name="abodOutlier"; version="0.1"; sha256="1pvhgxmh23br84r0fbmv7g53z2427birdja96a67vqgz18r3fdvj"; depends=[cluster]; }; abstractr = derive2 { name="abstractr"; version="0.1.0"; sha256="1ymwp7syrynwd4i8aj2x5n8jdi9d96fjzl6jb09n0bnr5fgl7vig"; depends=[colourpicker emojifont ggplot2 gridExtra rintrojs shiny shinythemes]; }; @@ -5235,38 +5422,41 @@ in with self; { accelmissing = derive2 { name="accelmissing"; version="1.4"; sha256="1nql9inx6azdzi3z4sfm2vdml2mms6krl8wzlf1dn1c97ahn57fy"; depends=[mice pscl]; }; accept = derive2 { name="accept"; version="0.7.1"; sha256="0pn8q0jsi0nb2mm2kv6sjczflflshhy55y7nqqnk70yx9f6wm83y"; depends=[dplyr extrafont MASS plotly stringr viridis]; }; accrual = derive2 { name="accrual"; version="1.3"; sha256="11clm9s5c5518nmp6hd6pjnp0s28y92b2i2x0xgj4j5g816p4j3z"; depends=[fgui SMPracticals tcltk2]; }; + accucor = derive2 { name="accucor"; version="0.2.4"; sha256="1vyppzskd5bw4mb0z8ilzh0j7jf00jr5wk5mykv7iwibwlscm5xx"; depends=[CHNOSZ dplyr gsubfn nnls readr readxl rlang stringr tibble writexl]; }; ace2fastq = derive2 { name="ace2fastq"; version="0.6.0"; sha256="09kk3yyqnr2xp820g0p3aai9a21figigjr9lxkr3zjq2d8gzwfic"; depends=[stringr]; }; - aceEditor = derive2 { name="aceEditor"; version="1.0.0"; sha256="0aphjbzbv308b08jng1pjri1k5macgiz4kl7xc1rxxd45bzr9l7h"; depends=[htmltools htmlwidgets reactR rstudioapi]; }; + aceEditor = derive2 { name="aceEditor"; version="1.0.1"; sha256="1qdxs20si1smjn24dlgq46x6qwjdwsa0f5lzh1vrbgv4kk9j1rfb"; depends=[htmltools htmlwidgets reactR rstudioapi]; }; acebayes = derive2 { name="acebayes"; version="1.10"; sha256="11bffz430gdfdaxjx3simig66vhynmx6l1ylac4q2shcmj52nx73"; depends=[compare lhs randtoolbox Rcpp RcppArmadillo]; }; acepack = derive2 { name="acepack"; version="1.4.1"; sha256="1f98rpfjmhd92rdc3j004plyfpjailz6j0ycysbac0kgj83haxc2"; depends=[]; }; acfMPeriod = derive2 { name="acfMPeriod"; version="1.0.0"; sha256="1yww8isfrbs2v9s94hx7p2imyszcgadwafdgpj438n2ik0q6p9d5"; depends=[MASS]; }; acid = derive2 { name="acid"; version="1.1"; sha256="030i0y8s283ivbsmjccpbv9v7mgbcg2jk9df7vgcbbns74swf9hd"; depends=[gamlss gamlss_dist Hmisc]; }; - acled_api = derive2 { name="acled.api"; version="1.0.8"; sha256="0ghpw1rw5wzf4889k9mq5ajk9smdc6jkj66fdsm6ns4v61kyyjx5"; depends=[httr jsonlite]; }; + acled_api = derive2 { name="acled.api"; version="1.1.3"; sha256="15pcxl8vqh9yd4pqpjm8wj555spdpgz44ghsqwxg54355539250k"; depends=[httr jsonlite]; }; acmeR = derive2 { name="acmeR"; version="1.1.0"; sha256="000b2hqlhj93958nddw0fqb15ahigs08najv2miivym046x04mf7"; depends=[foreign]; }; acnr = derive2 { name="acnr"; version="1.0.0"; sha256="087hq4i7jp67ba2finzsqjfnqbiprl33na6ryjv9zqzsdawj9cym"; depends=[]; }; acopula = derive2 { name="acopula"; version="0.9.3"; sha256="0vvbbw8pfs9jwfz5c57lw48pr0qj661r0ys007q6zf9jmlrhx1ln"; depends=[]; }; acp = derive2 { name="acp"; version="2.1"; sha256="0lcwbjcyyr32m6qjmjqh25qjwrbyqj1n092xhgbhxzd8fslppnmn"; depends=[quantmod tseries]; }; + acroname = derive2 { name="acroname"; version="0.1.0"; sha256="0fff7z3i8h30v7bsyq240h8ws5ld04n6c5r2iizd2icp8dk9xs9x"; depends=[dplyr hunspell magrittr purrr R_utils readr stringr]; }; acrt = derive2 { name="acrt"; version="1.0.1"; sha256="0y9ndcq8ffpfrv7w9rikm4zn68jpsj6baqisq9kp2433xrwzdb6s"; depends=[Rcpp RcppEigen sandwich]; }; acs = derive2 { name="acs"; version="2.1.4"; sha256="0ajw9rf8l8akcvgqvbxjvryc6wjx74521xyxswz2b0bky3m6kah5"; depends=[httr plyr stringr XML]; }; acss = derive2 { name="acss"; version="0.2-5"; sha256="0cqa60544f58l5qd7h6xmsir40b9hqnq6pqgd5hfx2j2l5n7qhmk"; depends=[acss_data zoo]; }; acss_data = derive2 { name="acss.data"; version="1.0"; sha256="09kl4179ipr8bq19g89xcdi1xxs397zcx5cvgp6viy8gn687ilgv"; depends=[]; }; - act = derive2 { name="act"; version="0.94"; sha256="1qvz84m0m5s1jarjhqxgsfc4aa5qql31f9f9vv2jlnwi3f60nnj2"; depends=[openxlsx progress stringi stringr XML]; }; - actel = derive2 { name="actel"; version="1.2.0"; sha256="11p4rlb72cvnra1fhaphviafr0gnn24qg8fgaqmq16sjgxw1knvn"; depends=[circular data_table DiagrammeR DiagrammeRsvg fasttime ggplot2 knitr readr reshape2 rmarkdown rsvg scales stringi stringr svglite]; }; + act = derive2 { name="act"; version="1.0.2"; sha256="15l7wqayf3h5qlsinbzhyvcq8l3mgspjf1qblbw0pwr8zk2sagbd"; depends=[openxlsx progress stringi stringr textutils XML xml2]; }; + actel = derive2 { name="actel"; version="1.2.1"; sha256="10gv6vc921ma6ckck9807j3j7z0m8kalwv5aj8xg6i2yqnia2zgs"; depends=[circular data_table DiagrammeR DiagrammeRsvg fasttime ggplot2 knitr readr reshape2 rmarkdown rsvg scales stringi stringr svglite]; }; activPAL = derive2 { name="activPAL"; version="0.1.3"; sha256="1h6hp5z89ji73gdzxy1dgbfwjysiy5lvcqh90xagpb7sa7ahs3na"; depends=[devtools dplyr ggplot2 lubridate magrittr tidyr]; }; + activatr = derive2 { name="activatr"; version="0.1.0"; sha256="0c0sn0b5w1k7kgrx8b6vanamlxsr9nqvkwhm0d8imghq8wl90h43"; depends=[dplyr geosphere ggmap glue httr lubridate magrittr rlang tibble timetk xml2]; }; activegp = derive2 { name="activegp"; version="1.0.5"; sha256="065swmmrcwkvnm5a6rhg4g4agbsgrzjfpkwyr649wr13d07yn291"; depends=[hetGP lhs numDeriv Rcpp RcppArmadillo]; }; - activity = derive2 { name="activity"; version="1.3"; sha256="12imqj366dp6pam5gap6ji56p5wf1073xz5g4iikfxf5l8snxw92"; depends=[circular insol pbapply]; }; + activity = derive2 { name="activity"; version="1.3.1"; sha256="1wn2a0hx7wfr2jyj1b772w5fgl6bcqkkw8cybais2s1wyjx8kjr5"; depends=[circular insol pbapply]; }; activityCounts = derive2 { name="activityCounts"; version="0.1.2"; sha256="0zgxr2sk3a8kmygfxx1p5hnrfwdkxx7php6jlrhm8wv6052ck8jz"; depends=[lubridate magrittr seewave signal tibble]; }; - activpalProcessing = derive2 { name="activpalProcessing"; version="1.0.2"; sha256="1y0bjx2qx53iy930y9iww4q1yzjj8y16cwgixk1mq3w4g1f116d1"; depends=[chron]; }; + activityGCMM = derive2 { name="activityGCMM"; version="1.0.0"; sha256="0wpsr3zjgizcv789akws4mf05shxr7g0jm0bk7gzf02gxrj0kv1w"; depends=[circular mclust overlap runjags]; }; actogrammr = derive2 { name="actogrammr"; version="0.2.3"; sha256="1jzvarmd41yqlrkagzlc8m19n5mn0w0b36fy50lyvgrfsafjfbqa"; depends=[dplyr ggplot2 lubridate readr tidyr]; }; - actuar = derive2 { name="actuar"; version="3.0-0"; sha256="0dkp1sczldzy7kj70qvh1q59jhsq1brjybmxdz43jnx63y45llpz"; depends=[expint]; }; + actuar = derive2 { name="actuar"; version="3.1-2"; sha256="0gaqm8bkjly2b1jkr1nqnxlp5vqvfpj0a4jd70jv4f9ndlif676y"; depends=[expint]; }; actuaryr = derive2 { name="actuaryr"; version="1.1.1"; sha256="08dzn565ax2l2hrn2m32k6magjbskybywl0hsgkg11nrjvkznwnx"; depends=[crayon dplyr lubridate magrittr purrr tibble]; }; acumos = derive2 { name="acumos"; version="0.4-1"; sha256="0ddy8gdpm5kapvlybmjd62pxbqa5lkj6zj2qqsmp63cgj3n6yjq2"; depends=[httr jsonlite RestRserve RProtoBuf Rserve yaml]; }; ada = derive2 { name="ada"; version="2.0-5"; sha256="1h3a07czp0w3hrhjcg1fz721y8vsfclzqi3rq8qfzgpfb4h1f06r"; depends=[rpart]; }; adabag = derive2 { name="adabag"; version="4.2"; sha256="109wrl1pwvmyv2l909hrvk7dg4aa9pv449mvdycp50zwrsw9w0a7"; depends=[caret doParallel foreach rpart]; }; - adagio = derive2 { name="adagio"; version="0.7.1"; sha256="1h9l0ddrxq8y35iy9hdkxdvdwsqpnpkzzbkbwwhm4380lq1m7a3k"; depends=[]; }; + adagio = derive2 { name="adagio"; version="0.8.4"; sha256="0ihv05402iq003m0338f85pnqnlnrmx0pf1mg8cz9sgi5h98mbnl"; depends=[lpSolve]; }; adamethods = derive2 { name="adamethods"; version="1.2.1"; sha256="150awbd3skb1mqca18bqjykhyycqw8crviw66s6qrcnmcsbk77pj"; depends=[Anthropometry archetypes FNN foreach nnls tolerance univOutl]; }; adapt4pv = derive2 { name="adapt4pv"; version="0.1.0"; sha256="0j0vdil277y035bqff3kwwrimjsv1pzfzj6qshyj7xh80dj6qsz8"; depends=[doParallel foreach glmnet Matrix speedglm xgboost]; }; - adaptMCMC = derive2 { name="adaptMCMC"; version="1.3"; sha256="08v11rl0p4w94knb0yzs1ysj42xillya62yaw3zm40d4pqv7vcky"; depends=[coda Matrix]; }; + adaptMCMC = derive2 { name="adaptMCMC"; version="1.4"; sha256="0yydliqhkz1y8lm4sb2biikbk8wmcyfqmamhm059843yk46nr6an"; depends=[coda Matrix ramcmc]; }; adaptMT = derive2 { name="adaptMT"; version="1.0.0"; sha256="1yllz1zd4cryf5bj8b2lcrj6zl79yjkllyh9p02ikryy5qmg419b"; depends=[]; }; adaptTest = derive2 { name="adaptTest"; version="1.0"; sha256="08d7a5dlzhaj236jvaw3c91008l66vf5i4k5anhcs32a3j8yh2iv"; depends=[lattice]; }; adaptalint = derive2 { name="adaptalint"; version="0.2.4"; sha256="15qdcvnnbgcps8j5k79354wsc9alswijv8lcafg2i3lghaw536yf"; depends=[dplyr lintr purrr]; }; @@ -5279,7 +5469,7 @@ in with self; { addhazard = derive2 { name="addhazard"; version="1.1.0"; sha256="0hk7br52wjmq605xgslv8lspr35aqpdgkiz2yljz31khy3y3vi8c"; depends=[ahaz rootSolve survival]; }; addinsJoaoMelo = derive2 { name="addinsJoaoMelo"; version="0.1.0"; sha256="1slx9vfcpb468asvgcj0vh7djc5rndzdpcp96qmnis77fx67xj5s"; depends=[dplyr purrr rstudioapi stringr]; }; addinsOutline = derive2 { name="addinsOutline"; version="0.1.6"; sha256="125qfqbpv5xflw8qlyh8m3iyd6biyp3arls3z7y8bqkbghifl730"; depends=[dplyr DT fs miniUI rmarkdown rstudioapi shiny shinyFiles stringr tibble yaml]; }; - addinslist = derive2 { name="addinslist"; version="0.3"; sha256="0rw87zxlq3b7ka782qwqbn2cc7w1cwcpg68l8s1mkrdgyaar4wr0"; depends=[curl DT miniUI rappdirs remotes rmarkdown rvest shiny shinyjs xml2]; }; + addinslist = derive2 { name="addinslist"; version="0.4.0"; sha256="0dg91lcb2xgsg6sim9fi9m2p203g2dp5bm5q7k0hy084057c22a5"; depends=[curl DT miniUI rappdirs remotes rmarkdown rvest shiny shinyjs xml2]; }; additiveDEA = derive2 { name="additiveDEA"; version="1.1"; sha256="15nxpdybsda6yhjk23bpafr8v1zdx8332pcxf26k795q3ypjpiy2"; depends=[Benchmarking lpSolveAPI]; }; additivityTests = derive2 { name="additivityTests"; version="1.1-4"; sha256="048ds90wqjdjy1nyhna3m06asdklbh8sx1n556kss2j1r1pma1sw"; depends=[]; }; addreg = derive2 { name="addreg"; version="3.0"; sha256="13bwmgxylwi02g60j1rr51cr5jvvkl2nvf2lnnhnq46fhvs2ma7s"; depends=[combinat glm2 turboEM]; }; @@ -5287,33 +5477,35 @@ in with self; { ade4TkGUI = derive2 { name="ade4TkGUI"; version="0.3-1"; sha256="1y0f62n8iv002ayd1nyl3bmszw558niwnfzjpvk0a7cbvfdyvwcg"; depends=[ade4 adegraphics lattice]; }; adegenet = derive2 { name="adegenet"; version="2.1.3"; sha256="1ipnawi0qfd4rfwj37igvh36x1a9d8x4n7xynn1jcr12rd713407"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; }; adegraphics = derive2 { name="adegraphics"; version="1.0-15"; sha256="12k77x6vnjz9s9dvz1r81ajqcl1nh9g33r7dymaqk2cs5q3wvfw7"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; - adehabitatHR = derive2 { name="adehabitatHR"; version="0.4.18"; sha256="0ss3fhpa7i2m4g55ajy9pgwgj393jbw58khgywc3gw9ys53h02sd"; depends=[ade4 adehabitatLT adehabitatMA deldir sp]; }; + adehabitatHR = derive2 { name="adehabitatHR"; version="0.4.19"; sha256="1zmsvv651l13pyc1f2jhmnzcv1a620mb7y3gmi7sdfh7jgms3g76"; depends=[ade4 adehabitatLT adehabitatMA deldir sp]; }; adehabitatHS = derive2 { name="adehabitatHS"; version="0.3.15"; sha256="1qhdwyjic4q24kk0pwrd0r8vdg5clv4g1hbdq07rl71jbcscdhvz"; depends=[ade4 adehabitatHR adehabitatMA sp]; }; adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.25"; sha256="1v83iw9argh11fi47hlb8ykigd8xh70hww3i4j8yrzfqwcr9aj4p"; depends=[ade4 adehabitatMA CircStats sp]; }; adehabitatMA = derive2 { name="adehabitatMA"; version="0.3.14"; sha256="0lfqg9g0wpq70md35b7gdgav3lliaxv8c8i13j3k0q436ids68iy"; depends=[filehash sp]; }; adephylo = derive2 { name="adephylo"; version="1.1-11"; sha256="06pnrycc7562h17gxbli935289a48na3p4vpb2w96i5cbrjg4jqm"; depends=[ade4 adegenet ape phylobase]; }; adepro = derive2 { name="adepro"; version="3.0.0"; sha256="0dx57kypg3hqppxpw4aqldnlmfkvxc1z60j3kw78zjm7vam43jcz"; depends=[audio Cairo dplyr gclus haven jsonlite MASS readr rlang seriation shape shiny shinyBS shinyjs shinyWidgets TeachingDemos tidyr V8]; }; - adept = derive2 { name="adept"; version="1.1.2"; sha256="0j8sd337j2c583pnwsfgc4r2251y8s5s4pkx79ifrhyc7c2qgfai"; depends=[dplyr dvmisc future magrittr tibble]; }; - adeptdata = derive2 { name="adeptdata"; version="1.0.1"; sha256="07146kv1llj5kci7s7v2jrqd7bl6h3rczx43nha5fhr57ldpcm40"; depends=[]; }; - adespatial = derive2 { name="adespatial"; version="0.3-8"; sha256="01i90802w98zyni6krcngk49f5jgi267w64l0wm8c2izrq4k5zg3"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep vegan]; }; + adept = derive2 { name="adept"; version="1.2"; sha256="1dpfmfnqzci6p7wqwpp8y0cisx11r8kdsqjm85skb512n35m0i3a"; depends=[dplyr dvmisc magrittr pracma]; }; + adeptdata = derive2 { name="adeptdata"; version="1.1"; sha256="0wzavbwc1slyr3wh5jkapghpa748rc86pbw5b4gcxki73r08r7j2"; depends=[]; }; + adespatial = derive2 { name="adespatial"; version="0.3-14"; sha256="1gxz9jc8br34s7yfkwnbijpnix5gbsr37ihn2xjj6ypdq54pbvx2"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep vegan]; }; adfExplorer = derive2 { name="adfExplorer"; version="0.1.4"; sha256="11z6jm20giqmmz4dwcpa9fshvrmlmv8m0y1vg053nch05884niz2"; depends=[]; }; adheRenceRX = derive2 { name="adheRenceRX"; version="1.0.0"; sha256="19kimj88dmcc8mq3s4l7pph9jz8p57gbjyn0pn5zkrcjdrwncslm"; depends=[anytime dplyr lubridate purrr Rcpp rlang tidyr]; }; adhoc = derive2 { name="adhoc"; version="1.1"; sha256="0a59fv9glcqh4zzd0887ndrhlcaylja6vay2ifajp8an29gjk1vv"; depends=[ape pegas polynom]; }; - adimpro = derive2 { name="adimpro"; version="0.9.2"; sha256="1ajq2889y70lxjdpf5zdg7zkz35i3i92li72wb7nbfngxmw47xzv"; depends=[awsMethods]; }; + adimpro = derive2 { name="adimpro"; version="0.9.3"; sha256="0njw38vcdm02sni193nj10mpv7hiklpamrkjlz5bnhjxx9mvf4cl"; depends=[awsMethods]; }; adiv = derive2 { name="adiv"; version="2.0.1"; sha256="184wgf91csafsk1x6blyv2l6m974lq1696d4i612ff7qrwbmicpv"; depends=[ade4 adegraphics adephylo ape cluster FactoMineR phylobase phytools rgl]; }; adjclust = derive2 { name="adjclust"; version="0.5.99"; sha256="1ij09mlmsqamvr8gmajg82qfn0l7q4x7hkavm7w42ndzjwwdmf7b"; depends=[capushe Matrix matrixStats]; }; adjustedcranlogs = derive2 { name="adjustedcranlogs"; version="0.1.0"; sha256="08apfvpqvnnalx230p4qf5ckrwm1sgzras4zfrysgym5d4map9ci"; depends=[cranlogs dplyr lubridate rvest xml2]; }; adklakedata = derive2 { name="adklakedata"; version="0.6.1"; sha256="1lzj3ib4bgfkq5lq12n47pwc52h7k35xbbwj6brwsgx1gd4fx3x6"; depends=[httr rappdirs]; }; adlift = derive2 { name="adlift"; version="1.4-1"; sha256="14q7fnhlqvxdhnfjhdhfmadz241srplbm069a7ybbsql21cphpf3"; depends=[EbayesThresh]; }; - admisc = derive2 { name="admisc"; version="0.11"; sha256="18m2kxr62mw9pkgpnnr7lnik73lb19d5gib8dm0b5d1a2c5abxyh"; depends=[]; }; + admisc = derive2 { name="admisc"; version="0.12"; sha256="0r3r1gm5qfm5dvhkj3lvp2bbwv5snqxqqlllvpbhl8xf9kwdn4jk"; depends=[]; }; admixr = derive2 { name="admixr"; version="0.9.1"; sha256="0wszpzs53cbnha13g2ldpq6z5ndw2v2xgrzadqkjm3hsp6akv4bl"; depends=[dplyr magrittr readr rlang stringr tibble]; }; admixturegraph = derive2 { name="admixturegraph"; version="1.0.2"; sha256="0ld4qyyvbnr5lz9ff64wjwif4c9xnqyjmbfgbl9bk6pia98zppl3"; depends=[doParallel dplyr foreach ggplot2 MASS neldermead pracma]; }; admmDensestSubmatrix = derive2 { name="admmDensestSubmatrix"; version="0.1.0"; sha256="1a5lfm10aj6wdjibdnmffn75zvy6x69w8nqcx2i23gxg6v0xlqcl"; depends=[Rdpack]; }; - adnuts = derive2 { name="adnuts"; version="1.0.1"; sha256="1l52f33yzbvcz27iw0k6iwcnfanr65lw206d7w4609k2vmlw8ink"; depends=[ellipse R2admb rstan]; }; + adnuts = derive2 { name="adnuts"; version="1.1.2"; sha256="0nkciv5sfj3bws6kpgrnaq4ziasibaz44w64mb86zmr8420nyc1q"; depends=[ellipse ggplot2 R2admb rlang rstan snowfall]; }; + adobeanalyticsr = derive2 { name="adobeanalyticsr"; version="0.1.5"; sha256="0sig63li7b8b38w9gf2xym0lklm5px89zdp8in1ybjrgpriy9v04"; depends=[assertthat dplyr ggplot2 glue httr jsonlite knitr lifecycle lubridate purrr purrrlyr rlang scales stringr tibble tidyr]; }; adoption = derive2 { name="adoption"; version="0.6.2"; sha256="18mjhsh19bjmh27sv5fiay0xv1la0qy96v48b093f7kqfx4c21xb"; depends=[quadprog RandomFieldsUtils tkrplot]; }; adoptr = derive2 { name="adoptr"; version="0.4.1"; sha256="1xx5mg1lhq4n5pi6wgmak2nmkfwyldkphcama5fdls03xiigy0cn"; depends=[glue nloptr]; }; adpss = derive2 { name="adpss"; version="0.1.1"; sha256="0p2gyfc4rxmms8zdsq4hjsh1njfl2s736arq8aq1am2wh1w9k5ch"; depends=[Rcpp]; }; - ads = derive2 { name="ads"; version="1.5-4"; sha256="1f2pd0hbbahqjv9fjvq1bgq1w5s11b73kpvj54j6i8h1ps6j69n7"; depends=[ade4 spatstat spatstat_data spatstat_utils]; }; + ads = derive2 { name="ads"; version="1.5-5"; sha256="1i6cv296i5di9irmch9wg6bpxg7s026axspq0mhcwrfyqnw8xnxs"; depends=[ade4 spatstat_geom]; }; + adsDataHubR = derive2 { name="adsDataHubR"; version="0.1.1"; sha256="19csivbg3f0g2r11l7jrciqq2lhg50km7qv29xfs6ba5cf678hb9"; depends=[httr jsonlite lubridate]; }; advclust = derive2 { name="advclust"; version="0.4"; sha256="1g8a8q4zh6d4152jb66fh7wj7k6ks5k4kfcazzw70jdn10yi6b38"; depends=[clue ggplot2 knitr MASS reshape2]; }; adventr = derive2 { name="adventr"; version="0.1.8"; sha256="0nja1a2xhaimz1fg2bb838x9a37sswjqjc68mp59gbdwkfpdii37"; depends=[BayesFactor boot car dplyr effects effsize forcats GGally ggplot2 Hmisc learnr lm_beta nlme readr robust sandwich sjstats tidyr WRS2]; }; adwave = derive2 { name="adwave"; version="1.3"; sha256="11iy50ng0zxvwsvdsvx262j8zgqaai308lp5is47az7xzvk57mx7"; depends=[waveslim]; }; @@ -5321,19 +5513,19 @@ in with self; { aemo = derive2 { name="aemo"; version="0.3.0"; sha256="108scwyf0dyvn969cks3ikbj2pf2g4dw051asahx26pl0ggw7ijw"; depends=[assertthat dplyr lubridate stringr]; }; afCEC = derive2 { name="afCEC"; version="1.0.2"; sha256="0jdppp93z5nb8m5qbry6cvd472mwiq1yrmm11906c3z2bfz7791f"; depends=[Rcpp RcppArmadillo rgl]; }; afc = derive2 { name="afc"; version="1.4.0"; sha256="1iy1wa88kf6zi6x7lbd0jdir653cvzvdraliqpxbac413wwb5gwl"; depends=[]; }; - afex = derive2 { name="afex"; version="0.28-0"; sha256="0c47bq2llzw2b4avhkxyhmf1m2zjh9jsjiw2kww9n1bhwqsyr4ci"; depends=[car lme4 lmerTest pbkrtest reshape2]; }; + afex = derive2 { name="afex"; version="0.28-1"; sha256="0blwqr5ni3psav1dcdmhfi4jy3b4scm5njimqfpr1d81zadvgc6g"; depends=[car lme4 lmerTest pbkrtest reshape2]; }; affinitymatrix = derive2 { name="affinitymatrix"; version="0.1.0"; sha256="10i7wzl4xiphj5f466ga7c4ha3mkyqn63x1z0jyx50m0b84sggq1"; depends=[expm ggplot2 ggrepel Hmisc MASS]; }; affluenceIndex = derive2 { name="affluenceIndex"; version="1.0"; sha256="1nb2dlsnvjsvkyrfdaskmpr3kv3qgdfb60xgmzvscfli0yf4dzr1"; depends=[]; }; afmToolkit = derive2 { name="afmToolkit"; version="0.0.1"; sha256="1pm3xyh9vq10mmfgknlvlfr9f027xprrgy1dvbbxpi7f111hv1gl"; depends=[assertthat DBI dplyr ggplot2 gridExtra minpack_lm scales tibble]; }; afpt = derive2 { name="afpt"; version="1.1.0.1"; sha256="0cg5cdm9nl1hs6f3j0ljpw4bkqvh3ksyj615b9nnbqs5k28lyds9"; depends=[]; }; - aftgee = derive2 { name="aftgee"; version="1.1.5"; sha256="12r020kyqq7zpdgnw4wv0rmdj4b82vdrxpv4zw4w8ij6zdgp2mg6"; depends=[BB geepack MASS survival]; }; agRee = derive2 { name="agRee"; version="0.5-3"; sha256="1wi8jn14kpsj5z49my6fz8j6zxysddxm8svw86cnzsmnbj6mzq7x"; depends=[coda lme4 miscF R2jags]; }; aggregation = derive2 { name="aggregation"; version="1.0.1"; sha256="0j9g604m2ccc7hcy02539yja9cf3xcbl25gvp838bp4x8w18my46"; depends=[]; }; + aghq = derive2 { name="aghq"; version="0.1.0"; sha256="1sfyfc71m7j6ybpnwgmpk4g0dvm6i4v0pilz20j5kav9r4f6vxkj"; depends=[dplyr magrittr Matrix matrixStats mvQuad polynom purrr rlang stringr tibble tidyr tidyselect]; }; agop = derive2 { name="agop"; version="0.2-3"; sha256="1z90a07wzn5z4cbafwpfh3l3v1bgq9g89qbdjm51f78zynnb27dk"; depends=[]; }; agriTutorial = derive2 { name="agriTutorial"; version="0.1.5"; sha256="0c0p0bqcrnx34q5brnvgq10wkzahvgyybaz2xfmcghbdvzahd2dx"; depends=[emmeans ggplot2 lattice lmerTest nlme pbkrtest]; }; agricolae = derive2 { name="agricolae"; version="1.3-3"; sha256="13hzlbm7khpz3xq0d7ijfvy4n489y97l3kzdspsqlz7rywbn7cg9"; depends=[AlgDesign cluster klaR MASS nlme]; }; - agridat = derive2 { name="agridat"; version="1.17"; sha256="0pgk9p6ynnz03k1ch9c15xbl777b0ml80shkbkxlnqn297q736vq"; depends=[]; }; - agriwater = derive2 { name="agriwater"; version="1.0.0"; sha256="0m1dpv69nf3pjp63z3a5710skgb6sbrmjv6b8rxvq9lrw63993g9"; depends=[raster rgdal sp]; }; + agridat = derive2 { name="agridat"; version="1.18"; sha256="0r3806inanb49snnliq1k2li40f3yl73h37apngfhk0fw2d46fq1"; depends=[]; }; + agriwater = derive2 { name="agriwater"; version="1.0.1"; sha256="1mssd0nxj8ayc3b2qcc7qzx93cnwnlxrnhn3rdknxc8iixkf40l8"; depends=[raster rgdal sp]; }; agrmt = derive2 { name="agrmt"; version="1.42.4"; sha256="0kbhmla14s2jr2sg8fz16zgmqz2n8q2228ny8naar0srjqjnb3c6"; depends=[]; }; agroclim = derive2 { name="agroclim"; version="0.1.0"; sha256="16cyqplzmwziqwkicix0sr06zhc0yx615iv3hda0cxbdyf2rllk3"; depends=[abind cowplot easyNCDF ggforce ggplot2 ggpubr gtable multiApply ncdf4 plyr raster reshape sp zoo]; }; agrostab = derive2 { name="agrostab"; version="0.1.0"; sha256="0mcskv3144j594wqljzn5pwbhkxh6sb76b1c2wabzjvi61zrapiv"; depends=[dplyr ggplot2 rlang]; }; @@ -5341,9 +5533,8 @@ in with self; { agtboost = derive2 { name="agtboost"; version="0.9.1"; sha256="01gydh7rlsgv759y3nahm9qi8pd24x37rpzv1frwzrr5jfbajqdl"; depends=[Rcpp RcppEigen]; }; ahaz = derive2 { name="ahaz"; version="1.14"; sha256="1z7w5rxd5cya7kxhgxqvn72k87y33ginxra9g7j9wrfs5jgx6kvx"; depends=[Matrix survival]; }; ahnr = derive2 { name="ahnr"; version="0.3.1"; sha256="1g8m3q108ricfyn4fjjaihpr93xz7fm2sfzg3i0fz1n1i703jwm8"; depends=[ggplot2 magrittr matrixcalc pdist pracma purrr visNetwork]; }; - ahp = derive2 { name="ahp"; version="0.2.12"; sha256="0zjhgl0smzx4bkhmdm4rmpyrq4hmxy1nkxvwqjr40pz7vm69icqx"; depends=[data_tree DiagrammeR formattable yaml]; }; ahpsurvey = derive2 { name="ahpsurvey"; version="0.4.1"; sha256="1r7x4c318nzbx0ppm9272kfpz2bln1cafkv9irnj85nsdcravr33"; depends=[dplyr knitr magrittr randomNames Rdpack tidyr]; }; - ahptopsis2n = derive2 { name="ahptopsis2n"; version="0.1.0"; sha256="1924hwk861mbbmcvf34lsmhxjga2rqz730817a19b0nkr308p6ma"; depends=[]; }; + ahptopsis2n = derive2 { name="ahptopsis2n"; version="0.2.0"; sha256="0pjxchrjik0d3ydr1hjqrba1p1y9sirwjwzjkmxh2fk803c0b9la"; depends=[]; }; aiRly = derive2 { name="aiRly"; version="0.1.0"; sha256="0d3w5dwk0b3pd49zw2005rili4p3l1i3x4hzp8cf6rljr86x01cy"; depends=[httr jsonlite reshape2 tibble]; }; aiRthermo = derive2 { name="aiRthermo"; version="1.2.1"; sha256="058082qdfi1pbdgf26vbfahri1kbc8b2l816q4dq89j5aj5is0a2"; depends=[]; }; aibd = derive2 { name="aibd"; version="0.1.8"; sha256="1pgfvz3b276y9pl6m3rghjlvhkrqp04w8gj3zzl7j446d372lm9h"; depends=[commonsMath rscala]; }; @@ -5351,8 +5542,9 @@ in with self; { aif360 = derive2 { name="aif360"; version="0.1.0"; sha256="0r9x9q8kc9alk1j3p0y23ispcbfac89q0c043vh8dw89q267plf8"; depends=[reticulate rstudioapi]; }; aimPlot = derive2 { name="aimPlot"; version="1.0.0"; sha256="1d52b7kccxba6j7n0gbd7pzs0p87zn32vv8gdf2f7lyr75qzgz7x"; depends=[ggplot2]; }; aimsir17 = derive2 { name="aimsir17"; version="0.0.2"; sha256="0v804maqaygqhw3y9wqap3h9vvjniqnnbsv1psjj500r2yscicxs"; depends=[tibble]; }; - airGR = derive2 { name="airGR"; version="1.4.3.65"; sha256="1x9zf6bbcaflszqzaki940xy33g4wj4yqsgbg836a1dwv1crd1l7"; depends=[]; }; - airGRteaching = derive2 { name="airGRteaching"; version="0.2.9.25"; sha256="0pkr5mkybxdk7axzd5ll87651x4b5yim1h9c8x3yapgp9vihvhnc"; depends=[airGR dygraphs markdown plotrix shiny shinyjs xts]; }; + airGR = derive2 { name="airGR"; version="1.6.12"; sha256="1jcnjrx7pgdj1mr1vrpm0cvmh243lpgwn1h3zsbk7rjwvapr3hji"; depends=[]; }; + airGRdatassim = derive2 { name="airGRdatassim"; version="0.1.3"; sha256="05c108rcj4rlzrbabai95abxhyjsrrrsgvds4zamvyzpjl64f9ps"; depends=[airGR]; }; + airGRteaching = derive2 { name="airGRteaching"; version="0.2.10.112"; sha256="0hmih733sghr2dgmvzkhj6p5cj2rz4jhc05fjw0ibvbfkxh2gh2g"; depends=[airGR dygraphs markdown plotrix shiny shinyjs xts]; }; aire_zmvm = derive2 { name="aire.zmvm"; version="0.8.2"; sha256="0z9knqdl7ihx2vph154qi1lh4s6yvlcw6kwry8k47mhh3p7pynsd"; depends=[dplyr httr lubridate progress readr readxl rvest sp stringr tidyr xml2]; }; airportr = derive2 { name="airportr"; version="0.1.3"; sha256="1h8h0cdfqgxv8cf9hp82sx5n4a1z88qyyxicj7d2kmmybqqz2r5n"; depends=[dplyr]; }; airports = derive2 { name="airports"; version="0.1.0"; sha256="1ahfqqfcvr731hj0h7d00jd87h1adiryh42sv4mh318lk5rglm6f"; depends=[]; }; @@ -5361,33 +5553,31 @@ in with self; { airt = derive2 { name="airt"; version="0.2.0"; sha256="1psr3zsvgvvg2r4mah0dq8zgagr6y85a541pmpm7aszzkkga4yp5"; depends=[EstCRM mirt pracma rlang tidyr]; }; ajv = derive2 { name="ajv"; version="1.0.0"; sha256="1qd5ncb7rdnnvqfknsvq9nrpxrh0zv3jyh4b91dcvfvhp262vfrm"; depends=[RJSONIO V8 yaml]; }; akc = derive2 { name="akc"; version="0.9.5"; sha256="0mjqz5csckdnl9wb2lypcj907qbkvppwbzvmfcl1a06431pj8zgv"; depends=[data_table dplyr ggforce ggplot2 ggraph ggwordcloud igraph magrittr rlang stringr textstem tibble tidygraph tidytext widyr]; }; - akiFlagger = derive2 { name="akiFlagger"; version="0.1.2"; sha256="0dhn44yy9z204blzr8xr7jrphlirl43dj209cxshn5y9wg5s58pp"; depends=[data_table dplyr zoo]; }; + akiFlagger = derive2 { name="akiFlagger"; version="0.3.0"; sha256="08z5jvigzvl3af17dd8l6zil0s694i22x0a7xvb3n4fvg6fargz4"; depends=[data_table dplyr shiny zoo]; }; akima = derive2 { name="akima"; version="0.6-2.1"; sha256="086q4ip6j226p8z5iqzfg551i15l5c0rnf4y4zavmpmqvwd2szz2"; depends=[sp]; }; akmbiclust = derive2 { name="akmbiclust"; version="0.1.0"; sha256="19dj12vlry6f3agzrnshx2c4rpa2h7dlx2138r49jjy9sm48pyfw"; depends=[]; }; akmeans = derive2 { name="akmeans"; version="1.1"; sha256="1nqbxbx583n0h2zmpy002rlmr6j86j6bg76xj5c69brrh59dpyw1"; depends=[]; }; - akmedoids = derive2 { name="akmedoids"; version="0.1.5"; sha256="0yn5rjgb5rrhphgbjn49098ybkmzda6yxzfqgbsppfgjidrafhza"; depends=[ggplot2 Hmisc kml longitudinalData reshape2 signal]; }; + akmedoids = derive2 { name="akmedoids"; version="1.3.0"; sha256="19d9fh1cygn04riwc7y7lzdncyxki9rzikf9f5m96vp0y687z2ka"; depends=[clusterCrit dplyr ggplot2 Hmisc kml signal]; }; alabama = derive2 { name="alabama"; version="2015.3-1"; sha256="0mlgk929gdismikwx4k2ndqq57nnqj7mlgvd3479b214hksgq036"; depends=[numDeriv]; }; - alakazam = derive2 { name="alakazam"; version="1.0.2"; sha256="0ba0gx682g3swbyyw4nmhxnnw0lzxb8rbapcgfq9jaagn8q63d0f"; depends=[ape dplyr ggplot2 igraph lazyeval Matrix progress Rcpp readr rlang scales seqinr stringi tibble tidyr]; }; - albatross = derive2 { name="albatross"; version="0.2-0"; sha256="0448syyfq6lkq4ccdxryzha9pdh61q45c0c1a59i0r2civa8z934"; depends=[lattice multiway pracma]; }; + alakazam = derive2 { name="alakazam"; version="1.1.0"; sha256="0iy3b1w2yx9d5xagbdb2xxl6ydm16mszs5mvx0bw5cfxrcffd680"; depends=[airr ape Biostrings dplyr GenomicAlignments ggplot2 igraph IRanges lazyeval Matrix progress Rcpp readr rlang scales seqinr stringi tibble tidyr]; }; + albatross = derive2 { name="albatross"; version="0.3-1"; sha256="0nfyrfcgpyxvpgpw8x3y6vgkvqwzlzgianvhvcndq80a5mvfrkrx"; depends=[lattice Matrix multiway pracma]; }; albopictus = derive2 { name="albopictus"; version="0.5"; sha256="0kw1agm9jqi9wl5zbx8bryngy751g3sih36rgbrx0m2170cy42d9"; depends=[]; }; - ald = derive2 { name="ald"; version="1.2"; sha256="1xmvxmyc1nmsrlyr0rvzz20jx6g1f2jvxpg9f39v48ngg5gmanjj"; depends=[]; }; + ald = derive2 { name="ald"; version="1.3.1"; sha256="12nf9vakayw24clrg56fh9x85kg277iricbs8ymahkjqjnc1p3cz"; depends=[]; }; alfr = derive2 { name="alfr"; version="1.2.1"; sha256="1ldq8gvgqjjabn86hdqb6hxch8x4hvr6djv5ly4mx039dipc8jxi"; depends=[httr jsonlite magrittr stringr]; }; - alfred = derive2 { name="alfred"; version="0.1.8"; sha256="0kw5kdcd253xmpfmjqsxky0ilq0djxn02mlnwydis0sxmrf4rxbh"; depends=[dplyr jsonlite lubridate magrittr rlang tibble tidyr]; }; + alfred = derive2 { name="alfred"; version="0.1.11"; sha256="12nrmklwwbj1ndciaz4slm221ji4k2vxfgpzkcna899r01mmpwv1"; depends=[curl dplyr jsonlite lubridate magrittr rlang tibble tidyr]; }; algaeClassify = derive2 { name="algaeClassify"; version="1.2.0"; sha256="1sna5rij2ngpgqfz5cviqdbyr43xph8cbjc4vnm238n72zgg7cb6"; depends=[httr lubridate plyr RCurl rvest taxize XML xml2]; }; algo = derive2 { name="algo"; version="0.1.0"; sha256="1g18p8jyj9crkqm16y2im3r9xzqwa36javv4vi1wvsqkg31d81si"; depends=[glue htmltools jsonlite]; }; algorithmia = derive2 { name="algorithmia"; version="0.3.0"; sha256="1ccmcsyxncyv8k0fjvr5y44amygqi7qx2dy6rsy3a5pw281hllr4"; depends=[base64enc httr rjson]; }; - aliases2entrez = derive2 { name="aliases2entrez"; version="0.1.1"; sha256="0gv76a8iwmpqrk3iw35mj7jzyfna7lga2amy5csgfpsz8w54jdd6"; depends=[AnnotationDbi doParallel foreach limma org_Hs_eg_db RCurl readr]; }; + aliases2entrez = derive2 { name="aliases2entrez"; version="0.1.2"; sha256="11myzwvmagnj35qrrxr35hklzv76c0c4h2zl64y3lzzn5rfii0n6"; depends=[AnnotationDbi doParallel foreach limma org_Hs_eg_db RCurl readr]; }; alignfigR = derive2 { name="alignfigR"; version="0.1.1"; sha256="0jsj0h7zpzj6ynfydl8qbggm03xx8db769rli7rcx9909xdxabk6"; depends=[ggplot2]; }; - alineR = derive2 { name="alineR"; version="1.1.4"; sha256="1gi4pl7ij60pz85yjiga5kvldraj9n3nhcyqdxrigs0cqvdwg3ar"; depends=[]; }; - allan = derive2 { name="allan"; version="1.01"; sha256="02bv9d5ywbq67achfjifb3i7iiaaxa8r9x3qvpri2jl1cxnlf27m"; depends=[biglm]; }; allcontributors = derive2 { name="allcontributors"; version="0.0.2"; sha256="0b9qiwp6z33fgci7np4qhsb39rzmarajsj3pa98vkmdn71bw1bxf"; depends=[cli clipr ghql git2r httr jsonlite magrittr]; }; alleHap = derive2 { name="alleHap"; version="0.9.9"; sha256="1fqrw645s3f5363p7jl3dzy8xphxdr1v6wdsjmqcqwpgvjqfr2zz"; depends=[abind]; }; allelematch = derive2 { name="allelematch"; version="2.5.1"; sha256="00117cj01psax4rjvy2nja5r2ss9l8zzjicczh46kp401i1ghmwc"; depends=[dynamicTreeCut]; }; allelic = derive2 { name="allelic"; version="0.1"; sha256="0xs4kd3vqb5ph8kqc3lcqgirrdkz8b627pvnczvci2g0sr3cl18j"; depends=[]; }; - allestimates = derive2 { name="allestimates"; version="0.1.9"; sha256="1ba3hf3wbhswaxmbi3lfjqzdgk7xf44x5xhggsqdw44kk080z7bb"; depends=[broom dplyr ggplot2 speedglm stringr survival tidyr]; }; + allestimates = derive2 { name="allestimates"; version="0.2.1"; sha256="1znjzqansh2117xpnwpsw450z20q6rz91h2kg35ygssg5skk8z6q"; depends=[broom dplyr ggplot2 speedglm stringr survival tibble tidyr]; }; alluvial = derive2 { name="alluvial"; version="0.1-2"; sha256="039frwrsxq1lb97s7vf2vbyyadimkigs628ymym06fxka53drdkp"; depends=[]; }; almanac = derive2 { name="almanac"; version="0.1.1"; sha256="0qsczk74ihy7ac5c4dzd6ax5gfmr56wfnjxg396qc2c3xykb7dd5"; depends=[glue lubridate magrittr R6 rlang V8 vctrs]; }; - alookr = derive2 { name="alookr"; version="0.3.2"; sha256="197sbnfckk24vsp6znx8q26hlrkawiy69849fkwnzal0bwwqx4l3"; depends=[caTools cli dlookr dplyr future ggmosaic ggplot2 MASS MLmetrics party purrr randomForest ranger RColorBrewer rlang ROCR rpart tibble tidyr tidyselect unbalanced]; }; + alookr = derive2 { name="alookr"; version="0.3.4"; sha256="157xk5h4dsjd14yv014nzqg80h6pcngcs9agv801m9iq7gyx9vyn"; depends=[caTools cli dlookr dplyr future ggmosaic ggplot2 MASS MLmetrics party purrr randomForest ranger rlang ROCR rpart tibble tidyr tidyselect unbalanced xgboost]; }; alpaca = derive2 { name="alpaca"; version="0.3.3"; sha256="1mpyy9wg2wvznkd9vgzaxyz87py9zmlrlrzrhqbmqiwqh5y99wnq"; depends=[data_table Formula MASS Rcpp RcppArmadillo]; }; alphaOutlier = derive2 { name="alphaOutlier"; version="1.2.0"; sha256="09yrbv7jsiymw5gzp8p92ki70v1fys2k75x4sb9s7wy3c58wn1cd"; depends=[nleqslv quantreg Rsolnp]; }; alphabetr = derive2 { name="alphabetr"; version="0.2.2"; sha256="1pmp6zwhgycb38y5jbvrbv2nza7gyjh508vy09ml483c2cysvc1r"; depends=[clue dplyr multicool Rcpp]; }; @@ -5398,26 +5588,26 @@ in with self; { alr4 = derive2 { name="alr4"; version="1.0.6"; sha256="0v98yzi0fcjxq0ak0w05001h8m9nfa9l0ann9bqvz8bwcmb3jlr2"; depends=[car effects]; }; altR2 = derive2 { name="altR2"; version="1.0.0"; sha256="15nvbq3n76p2857ipyf3q6rs2mwjqsp9gr3rmzbjfm8lrj0faxsv"; depends=[gsl purrr]; }; altadata = derive2 { name="altadata"; version="0.1.1"; sha256="0wv8a0423k0gw5i0qgz5d3wqw22a9pk7r80fp33pn0mxq9b54zdv"; depends=[httr jsonlite]; }; - altair = derive2 { name="altair"; version="4.0.1"; sha256="0s3pvlh6y4h3ni5m8yli6gp6gps7pcpndag40ckr31302ai3bxvq"; depends=[assertthat htmlwidgets magrittr repr reticulate vegawidget]; }; + altair = derive2 { name="altair"; version="4.1.1"; sha256="0fdhv23clmfcajjdrph0m8psrh5wr2giwhydbcrap9mdgbr0rkbk"; depends=[assertthat htmlwidgets magrittr repr reticulate vegawidget]; }; altfuelr = derive2 { name="altfuelr"; version="0.1.0"; sha256="0k3f4wr9gbn5aig40xg817hrnz2lx8g4adyy18s59fs8dw03v87h"; depends=[dplyr httr jsonlite lubridate magrittr purrr stringr]; }; - altmeta = derive2 { name="altmeta"; version="3.2"; sha256="0z252lbsknqp33i0b0xf5r7spr535iq47bv40vgip6nsqhgrl7b0"; depends=[coda lme4 Matrix metafor rjags]; }; + altmeta = derive2 { name="altmeta"; version="3.3"; sha256="1xq12hnzxh7kgv2i36xprg4lkvqfmxwz3sq4a1jlq2d5g3narvcm"; depends=[coda lme4 Matrix metafor rjags]; }; amap = derive2 { name="amap"; version="0.8-18"; sha256="0zpcb73w413na23f6giml9311jh0j0y766w2fh9i40d2h7bbvyvs"; depends=[]; }; - amapGeocode = derive2 { name="amapGeocode"; version="0.5.0"; sha256="0asnp4rcarxqx575g85wxpbv9ymrmm2xqyfm5p96x679xkmfanc6"; depends=[data_table httr jsonlite lifecycle magrittr sjmisc stringr xml2]; }; + amapGeocode = derive2 { name="amapGeocode"; version="0.6.0"; sha256="0j04hg2ks7578fiaymj295yll77xm6x5svmxx6m4n0djky8j10n1"; depends=[data_table furrr httr jsonlite magrittr sjmisc xml2]; }; amber = derive2 { name="amber"; version="1.0.3"; sha256="0kc7g5rb0wrs1id1k0qay56063gpffwvcll38983b1l3k215mxiv"; depends=[classInt doParallel foreach Hmisc latex2exp ncdf4 raster rgdal rgeos scico sp viridis xtable]; }; ambhasGW = derive2 { name="ambhasGW"; version="0.0.2"; sha256="0v517i4whip45pk6bwlwval9pz367pcgzz62b2z22mrwgi6m6bck"; depends=[raster rgdal yaml]; }; ambient = derive2 { name="ambient"; version="1.0.0"; sha256="0b8nd8g0ydglql2cwi4wmlnv5kyid8q51vz0p08f9m5x73k3z2bd"; depends=[Rcpp rlang]; }; - ameco = derive2 { name="ameco"; version="0.2.9"; sha256="0vzwsy7gp17ghl1hgcsbfs9rarzl8dl36x6lplnzrisqv3dqmk25"; depends=[]; }; + ambiorix = derive2 { name="ambiorix"; version="1.0.2"; sha256="1yzrh5nqhcri9ik25fc969fvckkwxp0hnwhfbdk61lp2gx6ll93k"; depends=[assertthat cli fs glue here httpuv jsonlite log promises websocket]; }; amelie = derive2 { name="amelie"; version="0.2.1"; sha256="0f4rfijskrw9nmyzbrbz6yfa9d0a5cxjw8n9c36hc6jvh377i7k7"; depends=[]; }; amen = derive2 { name="amen"; version="1.4.4"; sha256="00c4dw6s8yxagbgadvcpw4ima89aqjqgpm3460zi97xwq9404f1d"; depends=[]; }; amerika = derive2 { name="amerika"; version="0.1.0"; sha256="1c0bi0wrc89d0zv0wzmdvka66mcikgi1w4gn1i22mvg5bivhzaqx"; depends=[]; }; aml = derive2 { name="aml"; version="0.1-1"; sha256="09xxlxp784wlb561apns3j8f2h9pfk497cy5pk8wr4hhqqv4d3al"; depends=[lars]; }; - ammistability = derive2 { name="ammistability"; version="0.1.1"; sha256="1vp2857cwn4dd86vj8qf6h4z8hh5q2jvrlpmply8bf70mnmnq18h"; depends=[agricolae ggcorrplot ggplot2 Rdpack reshape2]; }; + ammistability = derive2 { name="ammistability"; version="0.1.2"; sha256="0ak20y5iv1cg5y06srdlfk5qp5c463ky41l350shnqpq550azy11"; depends=[agricolae ggcorrplot ggplot2 mathjaxr Rdpack reshape2]; }; ampd = derive2 { name="ampd"; version="0.2"; sha256="0bi8qngd37n60ym516yjcahxc536vdwm60rq5ld32170hww69j7c"; depends=[]; }; ampir = derive2 { name="ampir"; version="1.0.0"; sha256="081ah5fvfa4f2yj9zigj5b069dr8z8qs6mwb20w08wldlgcy2a5x"; depends=[caret kernlab Peptides Rcpp]; }; - amt = derive2 { name="amt"; version="0.1.3"; sha256="0ln08ivhq2s4kcnl2a5h7nlc22z3yvwx5xl45ps1inliddj99y22"; depends=[broom checkmate circular ctmm dplyr fitdistrplus FNN geosphere KernSmooth leaflet lubridate magrittr maptools purrr raster Rcpp Rdpack rgeos rlang sf sp survival tibble tidyr]; }; + amt = derive2 { name="amt"; version="0.1.4"; sha256="0xdrpkirdxmni3bcqjjx8xxh3b0bllmsgc3r7h9zd7sf0p3aldhs"; depends=[checkmate circular ctmm dplyr fitdistrplus lubridate magrittr purrr raster Rcpp Rdpack rgeos rlang sf sp survival tibble tidyr]; }; anMC = derive2 { name="anMC"; version="0.2.2"; sha256="0ab215nrqn535g9ayqzvgdckhwcrij1mc1296pvlj3grn3f8rhws"; depends=[mvtnorm Rcpp RcppArmadillo]; }; anacor = derive2 { name="anacor"; version="1.1-3"; sha256="0mj8g9p4fla0ax9jvcq7kii4lrhj8g872p11nys06anva22qjp51"; depends=[car colorspace fda]; }; - analogsea = derive2 { name="analogsea"; version="0.9.0"; sha256="0bj9b8ylimjyd4pm29h6dc1inbc0h2dxpbxp4sh2cdm5p65ly3cc"; depends=[httr jsonlite magrittr yaml]; }; + analogsea = derive2 { name="analogsea"; version="0.9.4"; sha256="0bhyf1b5cgg8p549yn9kdzn0vrdidy21zsc09bfqxnk58cw0hkf8"; depends=[httr jsonlite magrittr yaml]; }; analogue = derive2 { name="analogue"; version="0.17-5"; sha256="1iq0hdblpg1yb5ciralfxq7as9zwc58237hrzm0n51yb6a9vd1vd"; depends=[brglm lattice MASS mgcv princurve vegan]; }; analogueExtra = derive2 { name="analogueExtra"; version="0.1-1"; sha256="1s3qs10hf6hkna0bicid1mc8x8r449bl93xpgyw6lnsjgh2yx62c"; depends=[analogue rgl vegan3d]; }; analysisPipelines = derive2 { name="analysisPipelines"; version="1.0.2"; sha256="1rxam52wrbcjrvixb35b9ha37i8a0fczby49vmgzpnrbvkc50ldx"; depends=[dplyr futile_logger ggplot2 magrittr pipeR proto purrr RCurl rlang]; }; @@ -5429,8 +5619,8 @@ in with self; { andurinha = derive2 { name="andurinha"; version="0.0.2"; sha256="1cpz16zv3al6lmsqsb7dl5v6kml2a0hg084rbmwa4wsyk5ygl8bm"; depends=[cowplot ggplot2 plyr rlang signal tidyr]; }; anesrake = derive2 { name="anesrake"; version="0.80"; sha256="1p2g51w80jiadlf4asbnsw46asarzlzr5c1yfhdb31ymqxd7p76q"; depends=[Hmisc weights]; }; angstroms = derive2 { name="angstroms"; version="0.0.1"; sha256="1k8q4pkb5vcjfp2n2dga3q2ydmdxv020k5qzrb6w01ixrgf15d8l"; depends=[nabor ncdf4 proj4 raster sp spbabel]; }; - aniDom = derive2 { name="aniDom"; version="0.1.4"; sha256="1h19q3f16g6kacawd2i9i5lg64q436dsbzk9isf3p2mr7p24xbas"; depends=[rptR]; }; - anim_plots = derive2 { name="anim.plots"; version="0.2.1"; sha256="0z811y4zzrqas1ynrq4syhxvbcw2girxa6g9biry9d0qgq1w8cp1"; depends=[animation]; }; + aniDom = derive2 { name="aniDom"; version="0.1.5"; sha256="04gqq6ibmr7zq8p9cbpxj98afq7yz82gp7prwbq2ymbxnkywwpgq"; depends=[rptR]; }; + anim_plots = derive2 { name="anim.plots"; version="0.2.2"; sha256="0j786k5kkc1d33q52ki6fp3hnddjv7fv3ss6zjm9hqqgkq34vwqh"; depends=[animation]; }; animalEKF = derive2 { name="animalEKF"; version="1.1"; sha256="0bq2d2iza0c971731b915cd1k2f7gq2x1k7xv4z91sy73v0jngl5"; depends=[bezier colorspace deldir ellipse ggplot2 HDInterval maptools MASS Matrix MCMCpack mvtnorm plyr png rgdal rgeos shiny sp]; }; animalTrack = derive2 { name="animalTrack"; version="1.0.0"; sha256="0jlvfflpaq64s48sblzh1n1vx8g3870iss97whigri29s6hn79ry"; depends=[rgl]; }; animaltracker = derive2 { name="animaltracker"; version="0.2.0"; sha256="1zv2nj4wfskz1lxfgw8l4gyrlv418drk8zl4cw55i5na6a39shcv"; depends=[dplyr forcats geosphere ggplot2 httr leaflet leaflet_extras lubridate maptools raster rgdal scales shiny shinyBS shinycssloaders shinyjs shinythemes shinyWidgets sp tibble tidyr zoo]; }; @@ -5438,50 +5628,52 @@ in with self; { animint2 = derive2 { name="animint2"; version="2020.9.18"; sha256="17gr43hyb7yx9rsa0id5ibix09sai95pknc75cf31ra72mkpym8m"; depends=[digest gtable knitr lazyeval MASS plyr reshape2 RJSONIO scales tibble]; }; anipaths = derive2 { name="anipaths"; version="0.9.8"; sha256="02d2z236gjh40p29h86ikspnxim49c3c33r4dnf3yzns622ckm2c"; depends=[animation ggmap mgcv raster RColorBrewer scales sp]; }; aniview = derive2 { name="aniview"; version="0.1.0"; sha256="1klakkmdk4xllaxd0pllvxi4396n6rz2idz55niy91mp0fhcjhwf"; depends=[htmltools jsonlite]; }; - anndata = derive2 { name="anndata"; version="0.7.5"; sha256="0gx2j3xggvp3l793km6v8268ib1qks1qgn5fmjjglavwvs2y2xqc"; depends=[assertthat R6 reticulate]; }; + anndata = derive2 { name="anndata"; version="0.7.5.2"; sha256="1imxi8sjff7pdjlm33jq2fpbxdgcx9y6875g28gnrkdfj21w4h8p"; depends=[assertthat R6 reticulate]; }; anocva = derive2 { name="anocva"; version="0.1.1"; sha256="1byg40jla71k1901js5h9yq89j63d00vkm60id1fxlpv95c4wdrr"; depends=[cluster]; }; - anoint = derive2 { name="anoint"; version="1.4"; sha256="10gdqgag9pddvxh80h458gagvv1474g4pcpa71cg3h7g62rqvmv5"; depends=[glmnet MASS survival]; }; anomalize = derive2 { name="anomalize"; version="0.2.2"; sha256="13ncx17hdwv7799s7y6p3wvf59dad97y8rs9p56cbd91f6jkjgs5"; depends=[cli crayon dplyr ggplot2 glue purrr rlang rstudioapi sweep tibble tibbletime tidyr timetk]; }; - anomaly = derive2 { name="anomaly"; version="4.0.0"; sha256="08nlmy65qhxr67lywdgf6kvddms6bkfwfrb9s4pjvdgxp0db5gqk"; depends=[assertive BH cowplot dplyr ggplot2 Rcpp Rdpack reshape2 rlang robustbase]; }; + anomaly = derive2 { name="anomaly"; version="4.0.1"; sha256="1ska83fv82ns1vrrqwhkva10qhyhdz5lllird7dwh5a9sxxs71xh"; depends=[assertive BH cowplot dplyr ggplot2 Rcpp Rdpack reshape2 rlang robustbase]; }; anominate = derive2 { name="anominate"; version="0.6"; sha256="01p2qkqf88bzhwywyass5r8dwg2ycflmkbzmsps7fzy0kv3xyb02"; depends=[coda MCMCpack pscl wnominate]; }; anovir = derive2 { name="anovir"; version="0.1.0"; sha256="1x7lvj7xchbv6siyc9miivmf0rlxrjflal4icyvbxgdr285s2s9w"; depends=[bbmle]; }; anscombiser = derive2 { name="anscombiser"; version="1.0.0"; sha256="0jpmxgr5hfyv1hcjn4h1063ch3b3xlgqv983f4f9d2ajz5i5mdwv"; depends=[]; }; antaresEditObject = derive2 { name="antaresEditObject"; version="0.1.9"; sha256="09zmhzfdzxpp01wmdk230gff6zwgd5p2w3ppbq3a0df3f56x0hix"; depends=[antaresRead assertthat data_table whisker]; }; antaresProcessing = derive2 { name="antaresProcessing"; version="0.18.0"; sha256="1rw7g4706g4fdx7c7magxqj71h6iwkbslmyrqfwna4irnifjmv7g"; depends=[antaresRead data_table]; }; antaresRead = derive2 { name="antaresRead"; version="2.2.5"; sha256="10c3ql08211ylc271xk8ffnix3pzmnaylgf0ynwayp34hkgkf37h"; depends=[bit64 data_table lubridate plyr shiny stringr]; }; - antaresViz = derive2 { name="antaresViz"; version="0.15.3"; sha256="07a36dfgbf0bq17kqbvb1xm1mxmbhjj4s8mglawq77jksrjprl11"; depends=[antaresProcessing antaresRead assertthat data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate manipulateWidget plotly rAmCharts raster rgeos shiny sp spMaps webshot]; }; + antaresViz = derive2 { name="antaresViz"; version="0.15.4"; sha256="08av1gr8zw1d14mnxr791k9qfghjab24l6l35h82wv90jc5h78zr"; depends=[antaresProcessing antaresRead assertthat data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate manipulateWidget plotly rAmCharts raster rgeos shiny sp spMaps webshot]; }; anthro = derive2 { name="anthro"; version="0.9.4"; sha256="0blsfz3ckizkg4r4i3ib6b4yh40krcy8133v32f3yc220g2g2za9"; depends=[survey]; }; anticlust = derive2 { name="anticlust"; version="0.5.6"; sha256="1f5z05p5fwfgcj4vzg6kg9vihamcdha74yyn9c04m4kydyngnm85"; depends=[Matrix RANN]; }; antitrust = derive2 { name="antitrust"; version="0.99.14"; sha256="0mc7mgvhbfw9rp5w9vdd003mhp13pdjhrb8gybmkvan316mwygds"; depends=[BB evd MASS numDeriv]; }; antiword = derive2 { name="antiword"; version="1.3"; sha256="034znb0g9wwb8gi1r3z75v3sbb4mh83qrc4y8mbfx5lbgh8zhj6j"; depends=[sys]; }; anyLib = derive2 { name="anyLib"; version="1.0.5"; sha256="1x9x58hhkkwdskmgdjv94ynh811n9w0752hh4214adl1qpn576vm"; depends=[BiocManager curl devtools httr withr]; }; + anybadger = derive2 { name="anybadger"; version="0.1.0"; sha256="1aa09v5k5nlvhlir8saa5gnrq7cb1djbdc8y85cjgb3skay94hzv"; depends=[config glue magrittr purrr R6]; }; anyflights = derive2 { name="anyflights"; version="0.3.1"; sha256="08x4412xbmiisizdiby6b9xkhrlsag9hrmj681wpm6fm2bpk0q6y"; depends=[curl dplyr glue httr lubridate progress purrr readr roxygen2 stringr usethis vroom]; }; anytime = derive2 { name="anytime"; version="0.3.9"; sha256="0jjpqynai5nd7mfy1smb44356f3d5bmpxhs1i9x9jw5c959c35hh"; depends=[BH Rcpp]; }; aod = derive2 { name="aod"; version="1.3.1"; sha256="1g03ajhs6bid80i83xn3917abhymzgrydqx86wxxpkqga018hb85"; depends=[]; }; aods3 = derive2 { name="aods3"; version="0.4-1.1"; sha256="1kdmgzd5nkzm0awdjls6fc8p9hxsph9ha9k1jxbppdi4i6f0i7rv"; depends=[boot lme4]; }; aof = derive2 { name="aof"; version="0.1.2"; sha256="0552i5wvm04dq8a8y1x36sprc9cbx6k7c3bmsgqxm71dpsxajb0i"; depends=[bcpa]; }; aoos = derive2 { name="aoos"; version="0.5.0"; sha256="0y92vs27i0mkpjdclqzq4j9g1axkymhi3v8xp1v6hazh35yzjkfj"; depends=[magrittr roxygen2]; }; - aoristic = derive2 { name="aoristic"; version="1.0.0"; sha256="1qfphg5mh26q832pkh05q50lg60viyiwwcwmsagqb6r64llmysak"; depends=[foreign formattable ggplot2 htmltools lubridate openxlsx plyr]; }; + aopdata = derive2 { name="aopdata"; version="0.2.2"; sha256="1i62c119zxbn7qaywis99njjyqy17cgvdsng5sqm6ibnz2w0qzri"; depends=[crul curl data_table httr sf]; }; + aoristic = derive2 { name="aoristic"; version="1.1.0"; sha256="1i4bihdl4d0ihxf61xdqsb9k8j6im5dfqczy9nlc4xyn68b9m0l8"; depends=[dplyr ggplot2 lubridate openxlsx plyr scales tidyr]; }; aos = derive2 { name="aos"; version="0.1.0"; sha256="0nkl7dkqjfp4ahwmn3vs0akx6x2brf0m5gzzzx6pf54j1qwypbhf"; depends=[htmltools jsonlite]; }; apTreeshape = derive2 { name="apTreeshape"; version="1.5-0.1"; sha256="1wxhfp21ir9yv4wnbh7ay2x05k822nsyd5smlxmk67wm5w4vr1v1"; depends=[ape coda cubature pbapply quantreg]; }; apa = derive2 { name="apa"; version="0.3.3"; sha256="1nvhl5fqramsdrkpl1nmgr1vmki5c1lkdi1kkx7ihf0cz35f7c2a"; depends=[dplyr magrittr MBESS purrr rmarkdown stringr tibble]; }; - apaTables = derive2 { name="apaTables"; version="2.0.5"; sha256="0h986jqdl65fd33gfa433ik77r6lm9zrq75qfk5r8xsdgzb4wgva"; depends=[boot broom car dplyr tibble]; }; + apaTables = derive2 { name="apaTables"; version="2.0.8"; sha256="0jy6x0z9ivqqkjihqhyg3fxyghqa9gs6q2bpxzjdnbcb3kq151vd"; depends=[boot broom car dplyr MBESS tibble]; }; apaText = derive2 { name="apaText"; version="0.1.1"; sha256="1r217k60w027i63nbj24b1rm37m4qf7a6iirc941s945babkxcmb"; depends=[dplyr]; }; apc = derive2 { name="apc"; version="2.0.0"; sha256="0vh6iyxm46k8sfa1xgz0y6m619snnm8s072kml5qgiiw5s7bqnpq"; depends=[AER car ChainLadder ggplot2 ISLR lattice lmtest plm plyr reshape survey]; }; apcf = derive2 { name="apcf"; version="0.1.5"; sha256="1drhzk6v8xirjv3371nay3gz1v6wcklhywrzfqn32ibad7n31ph2"; depends=[Rcpp]; }; apcluster = derive2 { name="apcluster"; version="1.4.8"; sha256="0lzf2jqm56i74wif6x5sw3j0w2qc4sni49zq2fgbl89b7lwkvchj"; depends=[Matrix Rcpp]; }; apdesign = derive2 { name="apdesign"; version="1.0.0"; sha256="041zyd7ih9nnj92jj9vb9ya1ij9lmj1dzx64q74vyiadw1ix5l66"; depends=[Matrix]; }; - ape = derive2 { name="ape"; version="5.4-1"; sha256="1r7fwyz30ippcl1ibqiv1xryf44x5crcks5kx19h146ffj76qcgh"; depends=[lattice nlme Rcpp]; }; + ape = derive2 { name="ape"; version="5.5"; sha256="16i9sny7j90zi0k3znfff5lpnj5naxcy1142v73zxslr9g3h3am3"; depends=[lattice nlme Rcpp]; }; apercu = derive2 { name="apercu"; version="0.2.4"; sha256="046gf4dzypl6mmq7xqkyrdasq9rsjxzsii7w4nxkbn4c40kh7bf7"; depends=[pls]; }; apex = derive2 { name="apex"; version="1.0.4"; sha256="1ddzbzpnc17yvbl5yfyp0widqlx48qwlh80xcmyzhv045s680rdk"; depends=[adegenet ape phangorn]; }; apexcharter = derive2 { name="apexcharter"; version="0.1.8"; sha256="0mgd3i4hw5vg7lci6cwsyjpnvlw71zx57m7jjif1zm0ck70g5cfv"; depends=[ggplot2 htmlwidgets jsonlite magrittr rlang shiny]; }; aphid = derive2 { name="aphid"; version="1.3.3"; sha256="1jqpn7w5sgy4k49qd9ci6yj89s55gzwl5w5ldw793mzpg6if7lfn"; depends=[kmer openssl Rcpp]; }; + apisensr = derive2 { name="apisensr"; version="0.3.0"; sha256="1mis266s4m0hp34m7b7p008dvw7780r8rypgbpk7h5hgd1w5d7m0"; depends=[config episensr ggplot2 ggraph glue golem htmltools igraph rhandsontable rmarkdown shiny shinyjs shinymaterial]; }; aplore3 = derive2 { name="aplore3"; version="0.9"; sha256="0af6klscsxvh4amp519b6r41bzysf61p040fj4l5706bbya1arhw"; depends=[]; }; aplot = derive2 { name="aplot"; version="0.0.6"; sha256="08kqrm9r57l8zgij897wpp428l4i50qfhp7y78r3pk5pjz37bsan"; depends=[ggplot2 magrittr patchwork]; }; aplpack = derive2 { name="aplpack"; version="1.3.3"; sha256="010saim43d3hr83ksi916846rh6qfbb0gvhsf5jbdx95m4bai9g3"; depends=[]; }; - apng = derive2 { name="apng"; version="1.0"; sha256="13hvr1w566anrhdicaqwqjgfq2lk3zkn5gcfgy8zazjnad4vy07y"; depends=[bitops]; }; - apollo = derive2 { name="apollo"; version="0.2.2"; sha256="1nfc7fcdfl2p5rs2jmwmljl6vmf02sz37rxf7r9yd8ad96326mmb"; depends=[coda Deriv matrixStats maxLik mnormt mvtnorm numDeriv randtoolbox Rcpp RcppArmadillo RcppEigen RSGHB]; }; - apple = derive2 { name="apple"; version="0.3"; sha256="194z2f6hwdjjxdkjwlmfhpfp26p9yp3gparklhdbb6zlb4a9nnhz"; depends=[MASS]; }; + apng = derive2 { name="apng"; version="1.1"; sha256="0g1rs8wdcbqhyjis2r1a4d96jf0486ncnap97yjv08nk574d42wp"; depends=[bitops]; }; + apollo = derive2 { name="apollo"; version="0.2.4"; sha256="15x92hqg4l17prsc8wj04qr3kw7s69rn5wh7nna6zzbr1zwxpfls"; depends=[coda Deriv matrixStats maxLik mnormt mvtnorm numDeriv randtoolbox Rcpp RcppArmadillo RcppEigen RSGHB]; }; + appler = derive2 { name="appler"; version="0.1.0"; sha256="0mnpx6j275d9mj75g23jdhcpn452rql23wvfjm9wawkf9phs54lr"; depends=[glue httr jsonlite lubridate rvest xml2]; }; applicable = derive2 { name="applicable"; version="0.0.1.2"; sha256="0yzfk4ajdx4l3xivf6v9vn7fqvzfma4842cvjixrng83p2v25sdq"; depends=[dplyr ggplot2 glue hardhat Matrix proxyC purrr rlang tibble tidyr tidyselect]; }; appnn = derive2 { name="appnn"; version="1.0-0"; sha256="0wkpr6lcd68wlzk6n622ab7sd99l837073czn4k56hw8bw9v68j3"; depends=[]; }; approximator = derive2 { name="approximator"; version="1.2-7"; sha256="0smqjdla9mvzy164nsb0pw0sgal3w2wnyhqidp74h0smyczrr1zw"; depends=[emulator mvtnorm]; }; @@ -5489,39 +5681,46 @@ in with self; { aprean3 = derive2 { name="aprean3"; version="1.0.1"; sha256="17rnq02sncl6rzwyln10200s43b8z1s2j0kdi9kgcb6qr51v12rv"; depends=[]; }; apricom = derive2 { name="apricom"; version="1.0.0"; sha256="1gyd1yln14cn0iswj7sjs4hav6j6d4f3ncps4gqbci5fwha5blcr"; depends=[logistf penalized rms shrink]; }; aprof = derive2 { name="aprof"; version="0.4.1"; sha256="14qclp88j4ygd4vrxxpgy2s9939wcajjsqycdzpvn64ws29sdpvh"; depends=[testthat]; }; - apsimx = derive2 { name="apsimx"; version="1.964"; sha256="11pzk4jhgn576gbsfp0jrz8lzrg34ixw1s15b4mz4m0fw04fcxjw"; depends=[DBI jsonlite knitr RSQLite xml2]; }; + apsimx = derive2 { name="apsimx"; version="1.977"; sha256="0fv2f6dcbiphc0yzkklhmmkzd9m11h5ad08l9b9sqxfx1gnv0nzh"; depends=[DBI jsonlite knitr RSQLite xml2]; }; apsrtable = derive2 { name="apsrtable"; version="0.8-8"; sha256="1qmm89npjgqij0bh6p393wywl837lfsshp2mv9b5izh1sg2qfwvw"; depends=[]; }; apt = derive2 { name="apt"; version="3.0"; sha256="14njvpf6q34nffm3r9gqcszlabzbydsxqj0ln9nk4mv59izp8sqm"; depends=[car erer urca]; }; + aptg = derive2 { name="aptg"; version="0.1.1"; sha256="0mdhgc0jrl2za3k2awm92vky2ghcssqq1x2h57ns9b17lwdrsdl4"; depends=[ape brranching phytools taxize xml2]; }; apyramid = derive2 { name="apyramid"; version="0.1.2"; sha256="0ws6dfd6v3p9rhpmf06786yl2gaw1h2n1d76a054iap8bvgyahzw"; depends=[dplyr forcats ggplot2 glue rlang scales tidyselect]; }; - aqp = derive2 { name="aqp"; version="1.25"; sha256="1zy5684jx3j4m7ld8cj34kz7gs721mxs2k45n50q0mp5c1mr8kgl"; depends=[cluster lattice plyr reshape sp stringr]; }; + aqp = derive2 { name="aqp"; version="1.29"; sha256="1g1jbq45n9v5acbzh1w11zd2wd194p0jyx8gn686df6p111ahyxp"; depends=[cluster data_table lattice plyr sp stringr]; }; ar_matrix = derive2 { name="ar.matrix"; version="0.1.0"; sha256="1d531hkl50szfa1q0zbp8dp1a9jli63kwvxjgc9n0ar279y47qdz"; depends=[MASS Matrix sp sparseMVN]; }; + arabic2kansuji = derive2 { name="arabic2kansuji"; version="0.1.1"; sha256="0fb8qn9a7xyk2civs1s3cx61hxmkrj6pkwnfq7pbjdm2dh6xjfky"; depends=[purrr stringr]; }; arabicStemR = derive2 { name="arabicStemR"; version="1.2"; sha256="1vflynbi7aln7x2p4jg9gsvfrxn4v6qkb4wbrzxmj561lqy9fcay"; depends=[]; }; arc = derive2 { name="arc"; version="1.3"; sha256="0isfa7d26jpj004lf4f06krbfa68zyzrh5431xa63k2dykvg8c5j"; depends=[arules discretization Matrix R_utils]; }; - archdata = derive2 { name="archdata"; version="1.2"; sha256="0igh6qy3yv5hzprj9izpkqp3f6jkb7pydqzmnl8sqhqjqvb3lnij"; depends=[]; }; - archeofrag = derive2 { name="archeofrag"; version="0.6.0"; sha256="09ph3yhwj9kddd4clpd1ykdhhd4zn19y6rj7zaz52c3swa3wwgg0"; depends=[igraph RBGL]; }; + archdata = derive2 { name="archdata"; version="1.2-1"; sha256="1dahfl9xdnqiwzdrff98x23k1dl19sfdqnv7jlg1xzgvhj1fhk0d"; depends=[]; }; + archeofrag = derive2 { name="archeofrag"; version="0.7"; sha256="15bz2czjxiw0q46sbalfcqk3jacpf4zcaa8x8d6jvbsf4hib6i28"; depends=[igraph RBGL]; }; + archetyper = derive2 { name="archetyper"; version="0.1.0"; sha256="1d4vz7kj7n5j81fwfxvr47if8c7fdycci6n33wf8paac0v2paqli"; depends=[bannerCommenter config feather here knitr log4r ps readr rmarkdown skimr snakecase stringr testthat tidyverse]; }; archetypes = derive2 { name="archetypes"; version="2.2-0.1"; sha256="0ibxsr173ib77gjhid91m85s8gjii4mi2w3d52q5301igv20p7r0"; depends=[modeltools nnls]; }; - archiDART = derive2 { name="archiDART"; version="3.3"; sha256="01fmyp3f26v5rdgi00qyn139fgq55yxz5nhx223hg78qwrrbjvpw"; depends=[geometry gtools rgl sp TDA XML]; }; - archivist = derive2 { name="archivist"; version="2.3.4"; sha256="1i11hrcq1910jgd6diw6h3sxx624v57zjianm49pqvb2dvd0b8y7"; depends=[DBI digest flock httr lubridate magrittr RCurl RSQLite]; }; + archiDART = derive2 { name="archiDART"; version="3.4"; sha256="1wvjlg2rwy39czf3qqh9igk9rmk9i7pxa9yl5x9yqmsagwd1av3n"; depends=[geometry gtools sp XML]; }; + archiveRetriever = derive2 { name="archiveRetriever"; version="0.0.2"; sha256="1qxj9wbx53n8cbxhh9brkflpqz2dkaqw1wvjs2g58xamhrx4x8fa"; depends=[anytime dplyr ggplot2 gridExtra httr jsonlite lubridate rvest stringr tibble tidyr xml2]; }; + archivist = derive2 { name="archivist"; version="2.3.5"; sha256="0sk16bcafgswrvwh39ysbgm6jvsg20yil4pdsg3wsp81nnsrb43k"; depends=[DBI digest flock httr lubridate magrittr RCurl RSQLite]; }; archivist_github = derive2 { name="archivist.github"; version="0.2.6"; sha256="092fzi505vx9xbk41m86d0isxna42iflp7q2kjiqa6z1ccvim2yx"; depends=[archivist digest git2r httr jsonlite]; }; - arctools = derive2 { name="arctools"; version="1.0.0"; sha256="092nx4v24ib3m2yw9vr24p38227smvvss30dmf98qwi48pnfdr1k"; depends=[lubridate runstats]; }; + arcos = derive2 { name="arcos"; version="1.27"; sha256="02s4vpfsipww6i73lhrdawqlg01gp929n4sx6z869b12jixnq3ni"; depends=[curl dplyr httr jsonlite magrittr stringr tidyr urltools vroom]; }; + arcpullr = derive2 { name="arcpullr"; version="0.1.2"; sha256="0zhbznvfnyhj87a78p13qiqxadhswkh3v30v35kpd3my5r0w1y65"; depends=[dplyr ggplot2 httr jsonlite rlang sf tidyr]; }; + arctools = derive2 { name="arctools"; version="1.1.2"; sha256="0ncgdqcwyck3w8k7dir9lwvhmcxsal3kashbxcgq8z23s3gz96jm"; depends=[lubridate runstats]; }; + areabiplot = derive2 { name="areabiplot"; version="1.0.0"; sha256="0izgvlg174jbr3fm3qc8zh23kfs7hn9bwd40x6vm90iivrrgdcp7"; depends=[nipals]; }; areal = derive2 { name="areal"; version="0.1.7"; sha256="1kdnf7c21g51mhf428nl5jl96cfrk5iw1npzp5rv5ys3jp2mvhhi"; depends=[dplyr glue purrr rlang sf]; }; arealDB = derive2 { name="arealDB"; version="0.3.4"; sha256="1235j1w2gsv22k6a6zxanxvxx6fj1sifc5nkial883mpgvkbz789"; depends=[checkmate dplyr magrittr readr rlang sf stringr tabshiftr tibble tidyr tidyselect]; }; areaplot = derive2 { name="areaplot"; version="1.2.2"; sha256="0vyhf3662ppcahaw2zrxgpcxcn8fysd6lhl8vgr7cs8kl6fm4x47"; depends=[]; }; arena2r = derive2 { name="arena2r"; version="1.0.0"; sha256="14zjpglp389pldi436935fz6mgi4jdgfii1m035nsvihrms9gqkh"; depends=[dplyr ggplot2 magrittr purrr rlang shiny shinyBS shinydashboard shinyjs tidyr]; }; arenar = derive2 { name="arenar"; version="0.2.0"; sha256="08b865v7ringqzm5m4ib4nrmlyqywir6bjj7alzmg06dy7mrl9s7"; depends=[auditor DALEX fairmodels gistr iBreakDown ingredients jsonlite plumber]; }; arfima = derive2 { name="arfima"; version="1.7-0"; sha256="0kj8qv6m2fcdw8x735n8fk9cynm0jxi5v9hif0f879sxk6qkxb9y"; depends=[ltsa]; }; - argo = derive2 { name="argo"; version="2.0.2"; sha256="08ay5rrdra74x97ff4333w6lib92indjh774rsbn24mzc2n140ji"; depends=[boot glmnet Matrix XML xtable xts zoo]; }; + argo = derive2 { name="argo"; version="3.0.1"; sha256="1q7gbyk2f8vimwzdmd1mfqyaql2gyawywilwzs6g1716gbk3gd80"; depends=[boot glmnet Matrix XML xtable xts zoo]; }; argon2 = derive2 { name="argon2"; version="0.2-0"; sha256="0kqn06rpb39jlzizjlnc5c44mfic8llrshxn7ljgmyj35lbqwxqh"; depends=[]; }; argonDash = derive2 { name="argonDash"; version="0.2.0"; sha256="1wykr7y5375g1nb18ynybccxmd948xrr0gdwxxqsfjf782vlgd2d"; depends=[argonR htmltools shiny]; }; argonR = derive2 { name="argonR"; version="0.2.0"; sha256="15hlvansqnky9bnq4r7xza3hb1hzylmhz8117wxz9lxa1wiky2is"; depends=[htmltools rstudioapi]; }; argosfilter = derive2 { name="argosfilter"; version="0.63"; sha256="0rrc2f28hla0azw90a5gk3zj72vxhm1b6yy8ani7r78yyfhgm9ig"; depends=[]; }; argparse = derive2 { name="argparse"; version="2.0.3"; sha256="1c2r417m1dxk1jhcggv3g4zax5a59k9rqs9jcs6xy2pa2333jqfj"; depends=[findpython jsonlite R6]; }; - argparser = derive2 { name="argparser"; version="0.6"; sha256="1pxiz9jlhlnpzqn1lz349r07i7glw708w202x6dlnxp112fg7k4x"; depends=[]; }; + argparser = derive2 { name="argparser"; version="0.7.1"; sha256="0xcl0ivsbc4iw8s7027q4cx68j6s5lihbby0xa9pmlv4wjmcvdr6"; depends=[]; }; ari = derive2 { name="ari"; version="0.3.5"; sha256="03w99c918jp23d0kl26vx4m7xjicpgwl5rhn9d0fsm4kvv7j87li"; depends=[hms progress purrr rmarkdown rvest text2speech tuneR webshot xml2]; }; ariExtra = derive2 { name="ariExtra"; version="0.2.11"; sha256="1gl2r0qksfisv7h27x83b665h7016c6rlff04mgj8iwp29144lch"; depends=[ari docxtractr httr jsonlite magrittr mime pdftools rmarkdown rvest text2speech tuneR xml2 yaml]; }; aricode = derive2 { name="aricode"; version="1.0.0"; sha256="0i6vynhby4sjiaxscjrgrb5d96f307yjr8r9ff1fhv264lydcqwl"; depends=[Matrix Rcpp]; }; - arkdb = derive2 { name="arkdb"; version="0.0.8"; sha256="0028bkxjh1iaiqg1cwszwwz3kix59w4zbwhw01yjdz28giavzdzn"; depends=[DBI R_utils rappdirs]; }; - arkhe = derive2 { name="arkhe"; version="0.2.2"; sha256="0wfi6wgarjfkni4l1wy863i1cbqsckcw3ar357rkcwz3kks47f6p"; depends=[]; }; + arkdb = derive2 { name="arkdb"; version="0.0.12"; sha256="0r0lhkl402mwn3xsc3l8s9pzkl0x23ql3iggs8c8f9zdf8hp19i3"; depends=[DBI]; }; + arkhe = derive2 { name="arkhe"; version="0.3.0"; sha256="141jjzv8p0phhrvscblfp278yfdlvayiv2f0rq2pq8hgivkm0cpz"; depends=[]; }; arm = derive2 { name="arm"; version="1.11-2"; sha256="1grb27vayr2vhyalzfqbhx6p278r7c3l4pzi5nrz3dmnyqrbx1c3"; depends=[abind coda Hmisc lme4 MASS Matrix nlme]; }; armada = derive2 { name="armada"; version="0.1.0"; sha256="191iwf5y1za3wssawkyi9jcingfqqxcvv88hglpw6j7y3x5f47hf"; depends=[anapuce circlize ClustOfVar ComplexHeatmap doParallel FAMT glmnet impute mvtnorm qvalue VSURF]; }; armspp = derive2 { name="armspp"; version="0.0.2"; sha256="098c59hdzr4ly8sx72xkcbjmiz5y65id1slsscwjji1yssb23lqq"; depends=[Rcpp]; }; @@ -5529,26 +5728,26 @@ in with self; { aroma_affymetrix = derive2 { name="aroma.affymetrix"; version="3.2.0"; sha256="19xh67ncr8cs8i9k803qsnx7jhwj2b72ls7nznf3dn3frw9wyyfj"; depends=[aroma_apd aroma_core future listenv MASS matrixStats R_cache R_devices R_filesets R_methodsS3 R_oo R_utils]; }; aroma_apd = derive2 { name="aroma.apd"; version="0.6.0"; sha256="1l9p5qww71h6wlg2z15wirsfz2i7hmf637l17zaf3n7fp9s3flc7"; depends=[R_huge R_methodsS3 R_oo R_utils]; }; aroma_cn = derive2 { name="aroma.cn"; version="1.6.1"; sha256="1d9g81b12a3m03wrvb3cvg33fjybgiabpxhci2y2rr6diay42pmr"; depends=[aroma_core matrixStats PSCBS R_cache R_filesets R_methodsS3 R_oo R_utils]; }; - aroma_core = derive2 { name="aroma.core"; version="3.2.1"; sha256="1nc88h7khjabgzyj4nvjkx9dzmic6bhhfskf024yq3rf1d55v09g"; depends=[BiocManager future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; }; + aroma_core = derive2 { name="aroma.core"; version="3.2.2"; sha256="0ma84hhqn0g4pw0b8zkdcrz96z3j3lnw3yka0gd9861s80p33q1m"; depends=[BiocManager future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; }; arpr = derive2 { name="arpr"; version="0.1.1"; sha256="0j69nbmhmhmyfna011gv68wvxv1x2lijz94pyg9g2ax720x74i2q"; depends=[magrittr]; }; arrApply = derive2 { name="arrApply"; version="2.1"; sha256="0qy7iwi580rrf3sycsbv6qgxsqcdy9pdbnkdrx81j68qni9iw737"; depends=[Rcpp RcppArmadillo]; }; arrangements = derive2 { name="arrangements"; version="1.1.9"; sha256="0nrlyxgn6667l2rb1q5rvps1anld9aq88qqr3ch2i6zchnqxrdg9"; depends=[gmp R6]; }; arrayhelpers = derive2 { name="arrayhelpers"; version="1.1-0"; sha256="02rl530qxi1idiqpmzg5wr9vl5c7phizhpj64k5pn8xq9zfxbpaz"; depends=[svUnit]; }; - arrow = derive { snapshot = "2021-02-01"; } { name="arrow"; version="3.0.0"; sha256="0wgdj6fr4vbz91s76gfwyv2q66p8z3fwf9zgk4112rjhj60q7qfq"; depends=[assertthat bit64 cpp11 purrr R6 rlang tidyselect vctrs]; }; + arrow = derive2 { name="arrow"; version="4.0.0"; sha256="18sz7s0m5rjry9qjlq105qnri8cc5j15f325kmgzg6v4bn107wc1"; depends=[assertthat bit64 cpp11 purrr R6 rlang tidyselect vctrs]; }; ars = derive2 { name="ars"; version="0.6"; sha256="0zs1rk3i7pc9wcvxrvjcls194mfbvmkz7cb6pwd1cm3fzjwsyxsp"; depends=[]; }; arse = derive2 { name="arse"; version="1.0.0"; sha256="0ssaalc058m09gfcr1n0s729rx2plia3zkhlynj67drclyvhyb0i"; depends=[dplyr pracma]; }; - arsenal = derive2 { name="arsenal"; version="3.5.0"; sha256="0avi434wkk3w7axd89a4jwsbb11fi0239mkkla6zasnjwbqgjim0"; depends=[knitr]; }; + arsenal = derive2 { name="arsenal"; version="3.6.2"; sha256="0spm0s23xs5bm88slkz6a65mbs663qhnravwxp7rkdkr378vb5fn"; depends=[knitr]; }; artfima = derive2 { name="artfima"; version="1.5"; sha256="1nqsq9fsqk9kag9n7i2r9yvf578nkdfrkkv7qy8650prka0jca2p"; depends=[gsl ltsa]; }; - arules = derive2 { name="arules"; version="1.6-6"; sha256="1pk3jjizn2m5rwi7qkdkbq9f07acgpy0qdzzqmx0agg47cwahlkm"; depends=[Matrix]; }; + arules = derive2 { name="arules"; version="1.6-7"; sha256="0m80kndfbannw8h53nqdd5wl8h33q2z259aa1cp1nwadaxf9fc1q"; depends=[Matrix]; }; arulesCBA = derive2 { name="arulesCBA"; version="1.2.0"; sha256="1d72lrfbyr2g7n6r04vyaqs3pvs3jhkfr4yfgn2fj690q3ff0qr3"; depends=[arules discretization glmnet Matrix]; }; arulesNBMiner = derive2 { name="arulesNBMiner"; version="0.1-7"; sha256="1id1zhn9wb99qcq5yajn1safmmsw113f3xlpmcy3zwnapafcbh8a"; depends=[arules rJava]; }; arulesSequences = derive2 { name="arulesSequences"; version="0.2-25"; sha256="0vd5fgi1b45kgfm5yi9ygaxm0sb8qarz5lsknwh5gla3h0k7l66b"; depends=[arules]; }; - arulesViz = derive2 { name="arulesViz"; version="1.3-3"; sha256="1c51l4hqai07qx20lbdvffxw9kx0vkgbccw7b9wz1h2n5ma90c8y"; depends=[arules colorspace DT igraph plotly scatterplot3d seriation vcd visNetwork]; }; + arulesViz = derive2 { name="arulesViz"; version="1.4-0"; sha256="08as3kmwmhqcf8k2j6z9hcsyz8p8qfb93bj1jiqsyx2w50aar8qm"; depends=[arules colorspace dplyr DT ggplot2 igraph plotly scatterplot3d seriation tibble tidyr vcd visNetwork]; }; asVPC = derive2 { name="asVPC"; version="1.0.2"; sha256="07nfwr0lsfpwgfdgzcdn1svw8dnjfni5ga9q77yjd1bj0wf76ci2"; depends=[ggplot2 plyr]; }; asaur = derive2 { name="asaur"; version="0.50"; sha256="0c1rgic76w3i2xhna7i52lyc0p01s5b1mxyn55gqw6i19v9mq0b3"; depends=[]; }; asbio = derive2 { name="asbio"; version="1.6-7"; sha256="08lmb4dmbsavw17z1jqqiv2jin5ms4zq8nv1n1cjmh8xk3sywafw"; depends=[combinat deSolve gWidgets2 gWidgets2tcltk lattice multcompView mvtnorm pixmap plotrix scatterplot3d]; }; ascii = derive2 { name="ascii"; version="2.4"; sha256="0k675an7sl00bslx4yb6vvvgnp1kl244cfjljv632asqdm3rkmrv"; depends=[codetools digest survival]; }; - asciiSetupReader = derive2 { name="asciiSetupReader"; version="2.3.2"; sha256="13z1zh9xsf8229xiryms704w9klkj6ivxad2df3ns04ar7jy838z"; depends=[data_table haven miniUI readr rstudioapi shiny stringr vroom zoo]; }; + asciiSetupReader = derive2 { name="asciiSetupReader"; version="2.4.0"; sha256="02s3p0qqa9h1kyx96c29blwgfkdm50p10kr14wklh19gibiznyfj"; depends=[data_table haven miniUI readr rstudioapi shiny stringr vroom zoo]; }; asciicast = derive2 { name="asciicast"; version="1.0.0"; sha256="0vga88cq2hzi0bwq43n1yz5cm8kaag9xpg8v73gj06fb93lhha9x"; depends=[curl jsonlite processx tibble uuid V8]; }; asciichartr = derive2 { name="asciichartr"; version="0.1.0"; sha256="1b73bbysnxy3x3gwhm80xry45m18yh716wrc93v1awk3c1p2cv3m"; depends=[]; }; asciiruler = derive2 { name="asciiruler"; version="0.2"; sha256="0xhkbsy9dypk09avazgxczyfkh3rhdxhwci688dw1lxnhxv1hj24"; depends=[stringr]; }; @@ -5559,15 +5758,15 @@ in with self; { asht = derive2 { name="asht"; version="0.9.6"; sha256="0zi0v7v7ivis5v6a8m1vh21c1wymshxcb948amgrq1j6svm505sf"; depends=[bpcp coin exact2x2 exactci perm ssanv]; }; askpass = derive2 { name="askpass"; version="1.1"; sha256="07q0ik8jzk44vpwh48rr3fnpd7dzsdhjjsl4l850rffv3dyq4h6v"; depends=[sys]; }; aslib = derive2 { name="aslib"; version="0.1.1"; sha256="0vzrxxj298skgv6gn9cbhr75ywmh5amsk9m02zncl20jcydf9j91"; depends=[BatchExperiments BatchJobs BBmisc checkmate corrplot ggplot2 llama mlr parallelMap ParamHelpers plyr reshape2 RWeka stringr yaml]; }; - asnipe = derive2 { name="asnipe"; version="1.1.13"; sha256="1y7nvbnwymmw8bmq1g431sbyf3lng8aaianc63nx731n4m9rwhm9"; depends=[MASS Matrix]; }; + asnipe = derive2 { name="asnipe"; version="1.1.15"; sha256="1hnbkr26qmyv20w94wp0zxa8b0aqpsbrvsky4vcajlnpmgqhzlkk"; depends=[MASS Matrix]; }; aspace = derive2 { name="aspace"; version="3.2"; sha256="1g51mrzb6amafky2kg2mx63g6n327f505ndhna6s488xlsr1sl49"; depends=[Hmisc shapefiles splancs]; }; aspect = derive2 { name="aspect"; version="1.0-5"; sha256="0pbc0daxw20xcbgqyyd5gbs9kmbaf2dq8ajllx0mnfwdcak9jfgj"; depends=[]; }; aspi = derive2 { name="aspi"; version="0.2.0"; sha256="0rhvxw243vvdv3hxa6pi343gcjc2cbxq1jzqirl9k1l4i3897l87"; depends=[]; }; - asremlPlus = derive2 { name="asremlPlus"; version="4.2-26"; sha256="1ayzf5yc07n0gf72xpclv1x5aw6062mlw3nxadywx6l7df08v3if"; depends=[dae doParallel dplyr foreach ggplot2 plyr RColorBrewer reshape stringr]; }; + asremlPlus = derive2 { name="asremlPlus"; version="4.2-32"; sha256="19gallcq86nzdnpigcc1yx24cai09jkwzyn1f7h71w8sr6jfid4a"; depends=[dae doParallel dplyr foreach ggplot2 plyr RColorBrewer reshape stringr]; }; r_assert = derive2 { name="r_assert"; version="1.0.1"; sha256="0n5l48yb0djl6rdj50p1dslpw3c5kbi15yz6z6rdgic575gjwzdc"; depends=[]; }; - assertable = derive2 { name="assertable"; version="0.2.7"; sha256="1npks9rcrnchmd0silq6qrvqkmdkp9fwjkyyvvp1lqjclyxk6vkk"; depends=[data_table]; }; + assertable = derive2 { name="assertable"; version="0.2.8"; sha256="1cciil1nzxd8gbj49w99jiv077lbpb59vx7bmb4p218aj2h5hqq4"; depends=[data_table]; }; assertive = derive2 { name="assertive"; version="0.3-6"; sha256="02palil82idqhhshcdjsfsja9qkqnd0dczqzj5gbccy4hfg1c0y4"; depends=[assertive_base assertive_code assertive_data assertive_data_uk assertive_data_us assertive_datetimes assertive_files assertive_matrices assertive_models assertive_numbers assertive_properties assertive_reflection assertive_sets assertive_strings assertive_types knitr]; }; - assertive_base = derive2 { name="assertive.base"; version="0.0-7"; sha256="1xs3ysvj0z57c58jw57pckq2rynia6ks4rmjmc02alczhk54wbgh"; depends=[]; }; + assertive_base = derive2 { name="assertive.base"; version="0.0-9"; sha256="07m0ddz092bgbl2fn1yk932h0iajdcqkri632477wl5a1q5r3w2b"; depends=[]; }; assertive_code = derive2 { name="assertive.code"; version="0.0-3"; sha256="1qhbp668zfvhqs8avkhg9amp4zyazz6dsy4fc6kpdmw3sv8yi07g"; depends=[assertive_base assertive_properties assertive_types]; }; assertive_data = derive2 { name="assertive.data"; version="0.0-3"; sha256="00cvg2g36mdl8plrzx40m63qd55742mddqrchwy9n3c7mm4gn02s"; depends=[assertive_base assertive_strings]; }; assertive_data_uk = derive2 { name="assertive.data.uk"; version="0.0-2"; sha256="1fzjvhwp7mwkqqix29khvs6zcrc82n6j4czvzzb473vyjyvdlj5b"; depends=[assertive_base assertive_strings]; }; @@ -5582,38 +5781,39 @@ in with self; { assertive_sets = derive2 { name="assertive.sets"; version="0.0-3"; sha256="1cqvh2syvh5b6d85h601zjmsdbbf3h8q98ids4dfl4frdshpasc7"; depends=[assertive_base]; }; assertive_strings = derive2 { name="assertive.strings"; version="0.0-3"; sha256="0n6jrk88670g4ym0r8ii40a08a90z1xadj8wcryk8h0nl04dchfm"; depends=[assertive_base assertive_types stringi]; }; assertive_types = derive2 { name="assertive.types"; version="0.0-3"; sha256="0zxq1jfrzgw95ll7alvm0xnk7aihjdksngq4ya2whyvfjbmv4vdb"; depends=[assertive_base assertive_properties codetools]; }; - assertr = derive2 { name="assertr"; version="2.7"; sha256="1x868pd4dac1c7b1q5390wqh2f6s50km8nqcpim3nxcj2l4qkqdb"; depends=[dplyr MASS rlang]; }; + assertr = derive2 { name="assertr"; version="2.8"; sha256="00764vv86r3bn4r85in4w637harffyw605fgq0dj6mrbrwcfb650"; depends=[dplyr MASS rlang]; }; assertthat = derive2 { name="assertthat"; version="0.2.1"; sha256="17wy5bdfzg73sg2clisg1k3zyn1adkj59x56m5nwia2k8z67zkw5"; depends=[]; }; assignPOP = derive2 { name="assignPOP"; version="1.2.2"; sha256="0ws40rrz3zql8xsa0r8hgb81l75isglzsfhnb8jbvig6s9m058yi"; depends=[caret doParallel e1071 foreach ggplot2 MASS randomForest reshape2 stringr tree]; }; - assignR = derive2 { name="assignR"; version="1.2.1"; sha256="0xgqim8c5hi34dl76lrmj9nikqcn88wfcjs643a2dx06cmkkj1vi"; depends=[maptools raster rgdal sp]; }; + assignR = derive2 { name="assignR"; version="2.0.0"; sha256="0xwkqib879c13iqy1d260k08awbspa401j4mim7wzmfas4dp83jb"; depends=[maptools raster rgdal sp]; }; assist = derive2 { name="assist"; version="3.1.7"; sha256="0avxaa3v4gvb5d7fg761f9l5nr8nyqdq6sq408zpyaki6s6q3acf"; depends=[lattice nlme]; }; assocInd = derive2 { name="assocInd"; version="1.0.1"; sha256="16yzgvlqbapjhvzm5nw8vfrhh8mp9llnhck4bpgmszyrh93z1ha5"; depends=[]; }; assortnet = derive2 { name="assortnet"; version="0.12"; sha256="1vyzrb8vsi9pcdn6jd83k77bg0q2a3dwdvlnmxnshqiif2pakb8m"; depends=[]; }; + asteRisk = derive2 { name="asteRisk"; version="1.0.0"; sha256="0sp89q1iy1q8ypl2p9rr66yagmxy1dcwbawldsljrrql0f7a49n9"; depends=[deSolve]; }; aster = derive2 { name="aster"; version="1.0-3"; sha256="1bcghw30db8m39fqza2msi6ahfn6yx7gaa3fzcmnxb8jrvrlpjgy"; depends=[trust]; }; aster2 = derive2 { name="aster2"; version="0.3"; sha256="17d200sg0vn1fj6lb480dhszm70q6ipjldilb3x0jp72hiczakk9"; depends=[Matrix]; }; astroFns = derive2 { name="astroFns"; version="4.1-0"; sha256="0g5q0y067xf1ah91b4lg8mr9imj0d6lgig7gbj3b69fn335k363g"; depends=[]; }; - astrochron = derive2 { name="astrochron"; version="0.9"; sha256="14bzyp2927rklx9lfd3bikf5ck8irvr3s7266mh2245lyy79g9xi"; depends=[doParallel fields foreach IDPmisc iterators multitaper]; }; + astrochron = derive2 { name="astrochron"; version="1.0"; sha256="0238qv3fakm1i5zid8hslf1m99j7px2k07vlkp8pspnbivn553s3"; depends=[doParallel fields foreach IDPmisc iterators multitaper]; }; astrodatR = derive2 { name="astrodatR"; version="0.1"; sha256="00689px4znwmlp6qbj6z2a51b7ylx1yrrjpv6zjkvrwpv6lyj9fw"; depends=[]; }; astrolibR = derive2 { name="astrolibR"; version="0.1"; sha256="0gkgry5aiz29grp9vdq9zgg6ss47ql08nwcmz1pfvd0g0h9h75l8"; depends=[]; }; astsa = derive2 { name="astsa"; version="1.12"; sha256="00m0hj9b8rvs0l66i5ahr2gyz2zcxwdwhdn9z2hjagmc2zhn9qq1"; depends=[]; }; asus = derive2 { name="asus"; version="1.0.0"; sha256="16hp8xajb631a5amm1cvhzq8z4cwh1vjiavv3n11fzpxyskhmfrb"; depends=[rwt wavethresh]; }; asymLD = derive2 { name="asymLD"; version="0.1"; sha256="1q05pxwn6arpalspgf2m0cym4ivnwyv94i58k9kaihd37kvm5lgc"; depends=[]; }; - asymmetry = derive2 { name="asymmetry"; version="2.0.2"; sha256="0x5yzlf804mhwfr9244b04vnixiyh5d8vmqrfffgid3dijg2zszm"; depends=[gplots smacof]; }; + asymmetry = derive2 { name="asymmetry"; version="2.0.3"; sha256="030ml5fknfi57i7j9p3saawjgnqm2rs5y3n4bnsac6m8jlzjns5s"; depends=[gplots smacof]; }; asymmetry_measures = derive2 { name="asymmetry.measures"; version="0.2"; sha256="039afqmdir200aijln9q0g3rkahkxqahw6yz5mnw62jsslr9xskb"; depends=[gamlss_dist skewt sn]; }; asympTest = derive2 { name="asympTest"; version="0.1.4"; sha256="02l07psiy1888zx86j2r1l5lznz47wdmzbh39pd2nbj8r9i80szr"; depends=[]; }; asymptor = derive2 { name="asymptor"; version="1.0"; sha256="0fdib7wnfdb0vjflds68638wafw79i0wvwa5ak8q3f7ywawzngzx"; depends=[]; }; asypow = derive2 { name="asypow"; version="2015.6.25"; sha256="0il38djkmw5ka7czpalmhq6yycx7flpdpgbd7p5nx52rsjdv49mj"; depends=[]; }; ata = derive2 { name="ata"; version="1.1.1"; sha256="08wcnfkbcq2al5ivdjkrjr8alaz0026992ra3ihyw6sd74mcracx"; depends=[lpSolve]; }; atable = derive2 { name="atable"; version="0.1.10"; sha256="1jbpqsyhkkpiwnhwy9alh5s8q68amh0mylyzlc5pilpw0mnq9cjd"; depends=[DescTools doBy effsize Hmisc plyr reshape2 settings]; }; - atakrig = derive2 { name="atakrig"; version="0.9.7"; sha256="1dhzd9cb2w7l8hjrgvvnp160g32gs885c5d9x43ylxypbjxvl96g"; depends=[doSNOW FNN foreach gstat MASS Rcpp rgeos snow sp]; }; + atakrig = derive2 { name="atakrig"; version="0.9.8"; sha256="14li2lpb2bksrfdhvnhs4k22jw4r4x9rm6lq9kn9hzif7gsibwr9"; depends=[doSNOW FNN foreach gstat MASS Rcpp rgeos snow sp]; }; atlas = derive2 { name="atlas"; version="1.0.0"; sha256="02wm22j40llmdi6z3rzgbc5fpkzmjfq0xar33bypvj1dx1zxygnd"; depends=[httr testthat]; }; atmcmc = derive2 { name="atmcmc"; version="1.0"; sha256="05k69b5wlysz3kh0yiqvshgvr0nyz34zkvn6bjs30cwz7s9j21pn"; depends=[]; }; atmopt = derive2 { name="atmopt"; version="0.1.0"; sha256="1h79ngq1236gz4w29fs3nj46a3m1x8a28z3xnhc6wn3a46cf8zzi"; depends=[DoE_base gtools hierNet]; }; atsd = derive2 { name="atsd"; version="1.2.0"; sha256="0jan8r5f2r3l2xpdf9rrv4smkr2l645rfdgdfjb1xa54jd3pqvqs"; depends=[httr RCurl]; }; - attachment = derive2 { name="attachment"; version="0.1.0"; sha256="0j3zm0ibf1iv67jy4mq1fzckgbxhxyx74frplsl2np0fbdgsxdz6"; depends=[desc glue knitr magrittr rmarkdown roxygen2 stringr]; }; + attachment = derive2 { name="attachment"; version="0.2.1"; sha256="085q928kchascq3i5csw2kp1gqcqlw14gaamrv2rpn30fq1fb82f"; depends=[desc glue knitr magrittr rmarkdown roxygen2 stringr]; }; attempt = derive2 { name="attempt"; version="0.3.1"; sha256="1ylgg7jcp8wqmxgf1mydnvh26k0mr8jyjla4hw06730r40yrs58m"; depends=[rlang]; }; attenuation = derive2 { name="attenuation"; version="1.0.0"; sha256="0ys4psvkvimmym4qj9cmhq8y7x10kv0x6bsvpjkrsc3l8p2g3474"; depends=[]; }; - atus = derive2 { name="atus"; version="0.2"; sha256="1i67rx8p5v4shgbfcym4lbnlw55xx7w2fdzhgsgjjyfpwbpm7h4h"; depends=[]; }; + attrib = derive2 { name="attrib"; version="2021.1.2"; sha256="17s3hjp8zdl28y4h9iv854y1hli5yg1h0kqhj8v5hms1lhx7c1qq"; depends=[arm data_table dlnm ggplot2 glue lme4 lubridate magrittr mvmeta pbs progress stringr tibble tsModel]; }; auRoc = derive2 { name="auRoc"; version="0.2-1"; sha256="152jdvzigcplii5amj0mnral3g2jyy3rfsc745mx36sspw1396yx"; depends=[coda MBESS ProbYX rjags]; }; aucm = derive2 { name="aucm"; version="2019.12-1"; sha256="1vjb5jiq2iz6c8nhfcbqg21nms7nf485xlrgd7mdkbzvqxxl43h6"; depends=[kyotil]; }; auctestr = derive2 { name="auctestr"; version="1.0.0"; sha256="15b1x0c9yhl91gir7jmivp8vxzc8q7wvb0mgam9454avc6l29x4y"; depends=[dplyr tidyr]; }; @@ -5623,39 +5823,45 @@ in with self; { audiometry = derive2 { name="audiometry"; version="0.2.0"; sha256="1qgvzbq69xb9c8y7d4dxgnhppa485c4sfg0nb6gljd1vwj3y7iyf"; depends=[ggplot2]; }; audit = derive2 { name="audit"; version="0.1-1"; sha256="0hrcdcwda5c0snskrychiyfjcbnymkcl2x43bapb6inw9y8989qv"; depends=[]; }; auditor = derive2 { name="auditor"; version="1.3.0"; sha256="1h6k15z3xf8isqqarbah6mz3nabjva4dbrbnf1fjw34idj804jbw"; depends=[DALEX ggplot2 ggrepel gridExtra hnp scales]; }; + audrex = derive2 { name="audrex"; version="1.0.0"; sha256="0b68i5szvcndqfzmwnm88yf2cgyrp7fmg1gs671ckz9pqr026wkc"; depends=[abind bizdays fANCOVA ggplot2 imputeTS lubridate narray purrr rBayesianOptimization readr scales stringr tictoc xgboost]; }; augSIMEX = derive2 { name="augSIMEX"; version="3.7.4"; sha256="0620yxqi160ar91shl5macn890zpc60c9nqy4w8i6m7sskv6gl3z"; depends=[Formula MASS nleqslv Rcpp]; }; - augmentedRCBD = derive2 { name="augmentedRCBD"; version="0.1.3"; sha256="10xp33901i9xczn5gg6pwbcdp4nqbnqhixj4cjhwj8rfn0kjkq7l"; depends=[dplyr emmeans flextable ggplot2 moments multcomp multcompView officer Rdpack reshape2 stringi]; }; + augmentedRCBD = derive2 { name="augmentedRCBD"; version="0.1.4"; sha256="0hnany7qa34spvsz37b4l4wp81g96nac8hk3px0hy18qrikk1g18"; depends=[dplyr emmeans flextable ggplot2 moments multcomp multcompView officer Rdpack reshape2 stringi]; }; auk = derive2 { name="auk"; version="0.4.3"; sha256="10dvajhxcxx9fdayqyhq5nkfqb1k17xm04gpgahwdhvxx2g74qq6"; depends=[assertthat countrycode dplyr httr magrittr rlang stringi stringr tidyr]; }; aurelius = derive2 { name="aurelius"; version="0.8.4"; sha256="00bpf9sggvnajpmg3zsdgfjinkb6wbrcf1ris7qfhh1rp5rz4m4m"; depends=[gbm glmnet jsonlite]; }; - ausplotsR = derive2 { name="ausplotsR"; version="1.2.1"; sha256="1wblx9x7lnixdb94park2n3rq06hjdxn0cd843dg17814yfd6w8h"; depends=[betapart curl ggplot2 gtools httr jose jsonlite mapdata maps maptools plyr R_utils simba sp vegan]; }; + ausplotsR = derive2 { name="ausplotsR"; version="1.2.4"; sha256="0x94yx59gxa0mh2g6j2r8dxp7hyscmvcs9d1imjfrmi0r778f35f"; depends=[betapart curl ggplot2 gtools httr jose jsonlite mapdata maps maptools plyr R_utils simba sp vegan]; }; auth0 = derive2 { name="auth0"; version="0.2.1"; sha256="077nqh28q3b9jb25fy0157l06zpx3x0rg4z5dz2dqsh88xy4nhqj"; depends=[htmltools httr shiny shinyjs yaml]; }; auto_pca = derive2 { name="auto.pca"; version="0.3"; sha256="01m2ldpcxzj7fhgmr9wp4ha3gqdyh7l5bkrnw83smcbq5229hsyy"; depends=[plyr psych]; }; autoBagging = derive2 { name="autoBagging"; version="0.1.0"; sha256="01k44rgkpbbr3m2x360aq0fz2qi7nz036g5dsh2y3jy94rmddbyy"; depends=[abind caret cluster CORElearn e1071 entropy infotheo lsr MASS minerva party rpart xgboost]; }; autoCovariateSelection = derive2 { name="autoCovariateSelection"; version="1.0.0"; sha256="0s9ar7bmw0n84hvavp63zhm6769l9p88md0kqqcxl0mw67j8q930"; depends=[data_table dplyr purrr]; }; - autoFRK = derive2 { name="autoFRK"; version="1.3.3"; sha256="0pll0s1xbf16a30g965lxajh806wbi8dl6xlyz01pzafwvs8yjph"; depends=[fields filehash filehashSQLite filematrix FNN LatticeKrig MASS mgcv Rcpp RcppEigen RcppParallel RSpectra spam]; }; + autoFRK = derive2 { name="autoFRK"; version="1.4.3"; sha256="1k3h2gsck06dnvrifg9rhxi6b3fwfjrkvg0q2wzb9kdnnzgiwcln"; depends=[fields filehash filehashSQLite filematrix FNN LatticeKrig MASS mgcv Rcpp RcppEigen RcppParallel RSpectra spam]; }; + autoMrP = derive2 { name="autoMrP"; version="0.98"; sha256="0rn55vb9rpfbjvc8i4awmhhz9xg3acxxgwkk1jjzzhydhzgdg1q4"; depends=[doParallel doRNG dplyr e1071 EBMAforecast foreach gbm ggplot2 glmmLasso knitr lme4 purrr rlang tibble tidyr]; }; autoTS = derive2 { name="autoTS"; version="0.9.11"; sha256="1mwpazynp5hdc2ccnhvddkajfcd4qam23pvjl9accq1rnxzxkiyv"; depends=[dplyr forecast ggplot2 lubridate magrittr plotly prophet RcppRoll rlang shiny shinycssloaders tidyr]; }; autocogs = derive2 { name="autocogs"; version="0.1.3"; sha256="1xv2sv5p5pskp7mw9zcgcbwsbfzjiabigld92npd3mzy8n7zdli6"; depends=[broom checkmate diptest dplyr ggplot2 hexbin MASS mclust moments progress tibble]; }; autoencoder = derive2 { name="autoencoder"; version="1.1"; sha256="0ly1aanayk28nx6yqfhl7d0zm4vg6rfjikf5ibn8zhmkrfyflj1y"; depends=[]; }; - autoimage = derive2 { name="autoimage"; version="2.2.1"; sha256="0y60smwfhwaf305cj7k2p9959xg8m4h6yrxgxl581dzp7crykbxl"; depends=[colorspace fields ggplot2 mapproj maps MBA]; }; - autokeras = derive2 { name="autokeras"; version="1.0.1"; sha256="171q7i1zygzmkm34bi7grx5rvnjwks60ifk4k86kki5aiipzx4d5"; depends=[keras reticulate]; }; + autoharp = derive2 { name="autoharp"; version="0.0.6"; sha256="0a9wbp4kl22wq0yfbr48kvf6ynjfmpnas36xkvk61xyynakvj6fz"; depends=[dplyr igraph knitr lintr magrittr pryr rlang rmarkdown shiny stringr tibble tidyr]; }; + autoimage = derive2 { name="autoimage"; version="2.2.3"; sha256="1jhkd7mbig6wpyc69iynfrj5i62lrwcwqbgjkmq8b9p5raglm1g2"; depends=[colorspace fields ggplot2 mapproj maps MBA]; }; + autokeras = derive2 { name="autokeras"; version="1.0.12"; sha256="0wyqz40fc277z1q1zxdmmjzksnmlh58r27a6hx08h6hmzvng5avy"; depends=[keras reticulate]; }; automagic = derive2 { name="automagic"; version="0.5.1"; sha256="1mmm6kj6mxrn3s4v8ryszkxr9z7bh9cvhin7xjq111fkwly7wjkq"; depends=[dplyr formatR knitr magrittr purrr remotes yaml]; }; automap = derive2 { name="automap"; version="1.0-14"; sha256="1190kbmp0x80x0hyifdbblb4ijq79kvrfn9rkp5k6diig4v30n0w"; depends=[gstat lattice reshape sp]; }; automl = derive2 { name="automl"; version="1.3.2"; sha256="1nrg8q3y6rv69nmnsylg8rps4b4prx46j5a8ljlr24yc34504ck3"; depends=[]; }; automultinomial = derive2 { name="automultinomial"; version="2.0.0"; sha256="04rjg3xjlhnkchzvdxqm762z5abm81s5b9czgzmli30zh07bf3fd"; depends=[igraph Matrix numDeriv]; }; - autoplotly = derive2 { name="autoplotly"; version="0.1.2"; sha256="0ajzzj9w9f0v9n37liml63hq5xwkqq53lw85p0a2h99n4lg2hdg8"; depends=[ggfortify ggplot2 plotly]; }; + autoplotly = derive2 { name="autoplotly"; version="0.1.4"; sha256="1z577jvadgiz028z7x0786d3qhlkrvv9i34xmllizvg94kxv3bl1"; depends=[ggfortify ggplot2 plotly]; }; autoshiny = derive2 { name="autoshiny"; version="0.0.2"; sha256="0s06ynnirgsh19x8qq4020piirkhvjqpvz372syygvlal062y6cn"; depends=[shiny]; }; + autostsm = derive2 { name="autostsm"; version="1.3"; sha256="0w4f4fdl5ypd9d8zrw74cmih2m4fyp23cdnz0hx6pcbl4mgjlw9h"; depends=[data_table doSNOW foreach forecast ggplot2 ggrepel gridExtra imputeTS lmtest lubridate Matrix maxLik progress Rcpp RcppArmadillo sandwich strucchange tseries tsutils zoo]; }; autota = derive2 { name="autota"; version="0.1.3"; sha256="07n34v4lpql5n0y94pm07ywl2z9azjgjrpw7qyfxa6qw6gv71gid"; depends=[base64enc glue httpuv magrittr memoise purrr RJSONIO rlang rlist rstudioapi stringdist stringr xml2]; }; - autothresholdr = derive2 { name="autothresholdr"; version="1.3.9"; sha256="0lncasld1pbzkj5sk77qh75y1zjz71g9qvw8y4hf39zqf2prnp72"; depends=[checkmate ijtiff magrittr purrr Rcpp rlang strex stringr]; }; - av = derive2 { name="av"; version="0.5.1"; sha256="19ac9s8d0ah9ialbqv01lq3dma7lxv8s4alyj6iakjjb8z9l7g29"; depends=[]; }; + autothresholdr = derive2 { name="autothresholdr"; version="1.3.10"; sha256="1z52z4a0f2rqfy53jfznpwdipzz4wa55jgwrabr5smbs4knvk7q1"; depends=[checkmate ijtiff magrittr purrr Rcpp rlang strex stringr]; }; + av = derive2 { name="av"; version="0.6.0"; sha256="0g6815y24h4la714a5bkj7nj4n39jycfynkli6y3jlijql96j2il"; depends=[]; }; available = derive2 { name="available"; version="1.0.4"; sha256="18dqm10dicbvjd5wli4nkv4fip0fgh2b9h9gm5511ayfsdg8lc8l"; depends=[cli clisymbols crayon desc glue jsonlite memoise SnowballC stringdist tibble tidytext udapi yesno]; }; avar = derive2 { name="avar"; version="0.1.1"; sha256="1i0bk3y0ca58ihwn4di8rpkp5vs2j5b80rcvaf72n9h2hp8i2ncz"; depends=[Rcpp RcppArmadillo simts]; }; averisk = derive2 { name="averisk"; version="1.0.3"; sha256="02j27d4jxgy2bk5sgxp1xdfyqr321civs99qj0g8cp34gwqk0j3m"; depends=[MASS]; }; avocado = derive2 { name="avocado"; version="0.1.0"; sha256="0qy9ripwydm3f70rpxwk0asc7r25hg8jcbrr4rz8bxs93q1lsz8x"; depends=[]; }; - aweek = derive2 { name="aweek"; version="1.0.1"; sha256="0z2n003qg1565kanacw82i5bj33hjgbkp0glj20blwxgc3c7q25y"; depends=[]; }; - aws = derive2 { name="aws"; version="2.5"; sha256="1mwg1q7l4a07g5aa9c6kh3fpl9lakk01pbzlk7ixbpy12yfvj9nm"; depends=[awsMethods gsl]; }; + aweSOM = derive2 { name="aweSOM"; version="1.2"; sha256="0sd4jzx9gf13nk3hkmzmjrkwwvv5qsggi4vhvd1y47iann7xl4qd"; depends=[bslib cluster data_table DT e1071 fields foreign ggplot2 haven htmltools htmlwidgets kernlab kohonen rclipboard RColorBrewer readODS readxl rmarkdown shiny viridis]; }; + aweek = derive2 { name="aweek"; version="1.0.2"; sha256="00kzff09rmxz99yq3g97xbmh3xqyhfyjl84q9gayy9kkha8aiml4"; depends=[]; }; + aws = derive2 { name="aws"; version="2.5-1"; sha256="1fhm87iax6bkvd4vszvjbcqw3b2drs11rjxr7zf2w4sgc72svaz8"; depends=[awsMethods gsl]; }; aws_alexa = derive2 { name="aws.alexa"; version="0.1.8"; sha256="0m1i1xgi9fqixq90ai2ag0079aa75nlyhbr3ln3yhk5g8zx9i9m9"; depends=[aws_signature dplyr httr xml2]; }; aws_comprehend = derive2 { name="aws.comprehend"; version="0.2.1"; sha256="0qn4mkdd17c8kmrm4ml7l1x3rzaw3gbykhrj3m0ga53crcqdhqri"; depends=[aws_signature httr jsonlite]; }; aws_ec2metadata = derive2 { name="aws.ec2metadata"; version="0.2.0"; sha256="1lbljg2fp3yh1hwlbmprkc1prw80jv0ycvpg1vggagm68wm5x288"; depends=[curl jsonlite]; }; + aws_ecx = derive2 { name="aws.ecx"; version="1.0.4"; sha256="04g6q5c7sxp15756saij5pivdvsznpbdwic32pvk1cw704kq88iz"; depends=[aws_signature httr rjson xml2]; }; aws_iam = derive2 { name="aws.iam"; version="0.1.8"; sha256="1p4w50icfw6mrzr6aazdbh977yvyvsf1yavjscyvv11xf3y9f9j2"; depends=[aws_signature httr jsonlite xml2]; }; aws_kms = derive2 { name="aws.kms"; version="0.1.4"; sha256="0f9l62g4z68ickzi4if3pw3algb41rn47z9cpxga8aggkclk86l4"; depends=[aws_signature base64enc httr jsonlite]; }; aws_lambda = derive2 { name="aws.lambda"; version="0.2.0"; sha256="0vp13qw7mw8dz01q30z7bnj47qx9js1zmxasc2n733gi07fdj62f"; depends=[aws_signature base64enc httr jsonlite]; }; @@ -5669,28 +5875,29 @@ in with self; { azuremlsdk = derive2 { name="azuremlsdk"; version="1.10.0"; sha256="0s64kjrmcdnjdwh5mdm5vxgvrl9ghvfv6bair7qfzz32jlab99m0"; depends=[DT ggplot2 htmltools plyr reticulate rstudioapi servr shiny shinycssloaders]; }; b6e6rl = derive2 { name="b6e6rl"; version="1.1"; sha256="17scdskn677vaxx1h2jypqaffvjgczryplg17nr3wigi1x0cxg7a"; depends=[]; }; bPeaks = derive2 { name="bPeaks"; version="1.2"; sha256="1z6jghcmw0lwv17ms7gdp5zzimaawq3ahbwkxa4062g373592smd"; depends=[]; }; - bRacatus = derive2 { name="bRacatus"; version="1.0.1"; sha256="0miw6bsylfnbsmvjgscl4xzjbwsz43pgq38gaz54nb4vlrcxn9a1"; depends=[data_table geojsonio jsonlite maptools plotfunctions raster rgbif rgeos rworldmap sp]; }; + bRacatus = derive2 { name="bRacatus"; version="1.0.3"; sha256="17f6k4wa2jg2w4jr1xf2p3wqp9m81q4x33ksgvghx62cah2yf56q"; depends=[data_table geojsonio jsonlite maptools plotfunctions raster rgbif rgeos rworldmap sp]; }; bReeze = derive2 { name="bReeze"; version="0.4-3"; sha256="17nc6qvw9l6sq8knd1mk193md2y3z1jlcjymqzl389yxj8s0i2il"; depends=[lubridate]; }; bSims = derive2 { name="bSims"; version="0.2-1"; sha256="024k9s42a9w5pmw024b15sj5ilcfpkm7lv59yimjicr9lmw246kb"; depends=[deldir intrval MASS mefa4 pbapply]; }; bWGR = derive2 { name="bWGR"; version="1.6.6"; sha256="1m5spafvl5pn0s60vaf8wz7iaibsa7laq7kp8y9xj20pp3f76hvr"; depends=[Rcpp]; }; baRcodeR = derive2 { name="baRcodeR"; version="0.1.5"; sha256="1fdywv7mvxx3q8pildsfllmw814f2p71xcwvfmplngv2vgrpzz9w"; depends=[DT miniUI qrcode rstudioapi shiny]; }; - baRulho = derive2 { name="baRulho"; version="1.0.2"; sha256="1nm1jclis4xa4y7ljsydjwfch3xsxq4caj4gys57153m6ihrcyg2"; depends=[pbapply seewave tuneR warbleR]; }; + baRulho = derive2 { name="baRulho"; version="1.0.5"; sha256="0419nfhk5846ysc5p3dnlzfc1q5nsksgpwbjcif23fk4w13c7b9x"; depends=[fftw pbapply seewave tuneR warbleR]; }; babar = derive2 { name="babar"; version="1.0"; sha256="13j5klrcnd4dwrgdbxlvwcj56l9mzi4j9ga6jj5i04pgdc6vsfx5"; depends=[]; }; babel = derive2 { name="babel"; version="0.3-0"; sha256="1iwvx69051yhlxbcl6bypvc3mcih0q8bf3i29r3i79356hp12xqa"; depends=[edgeR]; }; + babelgene = derive2 { name="babelgene"; version="21.4"; sha256="1gk5pm3b3shr1id66a11ywc1b823gbj8yckg24szzfhj8g4ixyf0"; depends=[dplyr rlang]; }; babelwhale = derive2 { name="babelwhale"; version="1.0.1"; sha256="0mgkg9hji4mab3l33vvyyyc1d2q84l1zrmg63vr3b3gr0d62jcnl"; depends=[crayon dplyr dynutils processx purrr]; }; babette = derive2 { name="babette"; version="2.2"; sha256="0gbbx2awdml3z3wsgj7zsbqnfbvng5lmba5cl358xkz5q621cy9d"; depends=[beastier beautier mauricer phangorn remotes stringr testit tracerer xml2]; }; - babsim_hospital = derive2 { name="babsim.hospital"; version="11.5.14"; sha256="0w86psi062gk2i512dpj2a8fd6cfzixmrqvh5il5cbqii23bkahr"; depends=[data_table dplyr ggplot2 golem igraph lubridate markovchain padr reshape2 rvest scales simmer slider SPOT xml2]; }; - babynames = derive2 { name="babynames"; version="1.0.0"; sha256="1vchzyk5pkr0zhh1q8k9g771n45jxiislipwkgrgamv7yzr49xsp"; depends=[tibble]; }; + babsim_hospital = derive2 { name="babsim.hospital"; version="11.7.14"; sha256="1jki8zg6wfnqps91ziyy3ik5cqqc7cx7sc8d32rimj1gwvg9ig1z"; depends=[checkmate curl data_table dplyr ggplot2 golem igraph lubridate markovchain padr plyr rvest scales simmer slider SPOT testthat xml2]; }; + babynames = derive2 { name="babynames"; version="1.0.1"; sha256="1gcpd6lncqwjz05z98ra6hcc8q966l2594ylkg50avndild89n3h"; depends=[tibble]; }; bacistool = derive2 { name="bacistool"; version="1.0.0"; sha256="1hby2bmxbc8qgjzgkp2flv89lpzzvg3vr7s98989ayjmv4vgmqaf"; depends=[rjags]; }; backShift = derive2 { name="backShift"; version="0.1.4.3"; sha256="1dhmq51w07vcqlngsb04ip0wqbgqq2xdfdm1w82r082f07ywqb16"; depends=[clue ggplot2 igraph MASS matrixcalc reshape2]; }; - backbone = derive2 { name="backbone"; version="1.2.2"; sha256="0h6da62ryjzfvfg1n89fj25400v8j012py9shhprss085j923bl4"; depends=[CVXR igraph Matrix network Rcpp]; }; + backbone = derive2 { name="backbone"; version="1.4.0"; sha256="17d86rhf7qg1dwqyknn4dmfwxv4vkl7d2yzv8rn6a0jx00mdwb9i"; depends=[igraph Matrix network PoissonBinomial]; }; backpipe = derive2 { name="backpipe"; version="0.2.3"; sha256="12k2cv9x8h0b002m9c8g4vj5a7chp4b8jqz377ia0diqw89dydpm"; depends=[]; }; backports = derive2 { name="backports"; version="1.2.1"; sha256="1mf2nz78l97lbxyagv55bcxrny51ds8g28h307cfa1g3ayylp0x2"; depends=[]; }; backtest = derive2 { name="backtest"; version="0.3-4"; sha256="1s0mf247dz2vvyf4m3sp9xiqhv7xcs4rphyg9gdcy73060sah2ad"; depends=[lattice]; }; bacondecomp = derive2 { name="bacondecomp"; version="0.1.1"; sha256="1sd6pbhmx8vxz5c2cvvadbjy7p15y91gzs3n0ish7h5br1vq8fpm"; depends=[]; }; bacr = derive2 { name="bacr"; version="1.0.1"; sha256="14zr1v4rihx0ra3x0vsb81vsz0g8gzskkdxkg7nhiz835hp2fiy8"; depends=[MCMCpack]; }; badgecreatr = derive2 { name="badgecreatr"; version="0.2.0"; sha256="0mdixklaxky5gs8zm99ky280vxxlbq1mxnaarq6x0d1cb71bzv4l"; depends=[git2r]; }; - badger = derive2 { name="badger"; version="0.0.9"; sha256="0414ynf26apxwgzcwk104dj52j9dbwm475n3s20k4cx471h18xbd"; depends=[desc dlstats rvcheck]; }; + badger = derive2 { name="badger"; version="0.1.0"; sha256="09g8183dz58546mcql7fs2px71ycpi2jfw69zca9d96c9py98ryn"; depends=[desc dlstats rvcheck usethis]; }; baggedcv = derive2 { name="baggedcv"; version="1.0"; sha256="1rqs4sm6g1anck5s2dxlm1vcmylpphcbs2dpvf1sjki5lrzdq9z4"; depends=[doParallel foreach kedd mclust]; }; baggr = derive2 { name="baggr"; version="0.4.0"; sha256="1cbajifb4gavamj46zs9vk6ihhg6wnv2hn75452bdc2mc4ingn5n"; depends=[bayesplot BH crayon forestplot ggplot2 gridExtra Rcpp RcppEigen rstan rstantools StanHeaders testthat]; }; baguette = derive2 { name="baguette"; version="0.1.0"; sha256="0yjy0ba3a1r39b7l5igjyzf6v5gfyb4ll6mvd7wskzvnr0gyaq9n"; depends=[butcher C50 dials dplyr earth furrr generics hardhat magrittr parsnip purrr rlang rpart rsample tibble tidyr withr]; }; @@ -5698,21 +5905,21 @@ in with self; { bain = derive2 { name="bain"; version="0.2.4"; sha256="15car9j11s0ywss13g5swf1dxjjc91xmbkvx200mivca9bj6245m"; depends=[lavaan]; }; baitmet = derive2 { name="baitmet"; version="1.0.1"; sha256="02ydakqr8v41hdnhcsgigwnic8d48qswryg1srb5w1fqdmdglnkl"; depends=[erah HiClimR Rcpp signal XML]; }; balance = derive2 { name="balance"; version="0.2.4"; sha256="13ksd1ysd2by8qdc3vn1fgnaj1c2v0py7f501bajiyq6hpcwn1c5"; depends=[ggplot2]; }; - bama = derive2 { name="bama"; version="1.0.1"; sha256="009k79jwmbi88qknp7fmg5lb09q3h8b8r26skfzwj7bs24980jvr"; depends=[Rcpp RcppArmadillo]; }; + bama = derive2 { name="bama"; version="1.2"; sha256="1amxls4jl2ys5wkn600xmx0y3d9zhkz2s96vn7h8fnrrv35212yp"; depends=[BH Rcpp RcppArmadillo RcppDist]; }; bamboo = derive2 { name="bamboo"; version="0.9.25"; sha256="1il8sn8ck36b1m9hazhf6gmr58iqi2hjn0rrpcv1laij0lybrcws"; depends=[rscala]; }; bamdit = derive2 { name="bamdit"; version="3.3.2"; sha256="11v9hy8ijbcqhwim0s3y69dz11jvys4vjvfnshj4p5qdz38sji6l"; depends=[ggExtra ggplot2 gridExtra MASS R2jags rjags]; }; - bamlss = derive2 { name="bamlss"; version="1.1-2"; sha256="0s0i2qpwcshfqxciwp5w7mxvw0a1x52y4yaspvf1gx9jms7bqn8b"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm raster sp survival]; }; + bamlss = derive2 { name="bamlss"; version="1.1-3"; sha256="0wijazi59ymm5a21qhi6afclw5w48j47y433rq2zzk04v6qhgh3w"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp survival]; }; bamp = derive2 { name="bamp"; version="2.0.8"; sha256="0p7vi9gqplqnrc0vl55m1xx160k5kdxs4sxqxyrg908yhsnr5vj6"; depends=[abind coda]; }; - banR = derive2 { name="banR"; version="0.2.2"; sha256="0a9kgfd5jzcb5hpl1fzgvmfszmji2vy14gnl8k9irn40n6kdjs0v"; depends=[dplyr httr magrittr purrr readr rlang tibble]; }; bandit = derive2 { name="bandit"; version="0.5.0"; sha256="03mv4vbn9g4mqikd9map33gmw2fl9xvb62p7gpxs1240w5r4w3fp"; depends=[boot gam]; }; bang = derive2 { name="bang"; version="1.0.1"; sha256="0m7p9gzspkyp40ir842ff4b1827w9rh7x49kpp3y4dpi83krqy5a"; depends=[bayesplot rust]; }; - bannerCommenter = derive2 { name="bannerCommenter"; version="0.1.1"; sha256="0ndm4z6gkd9flxsh1sx08c5ahm8297hzn8f5hc1mpn5m998ajjsj"; depends=[]; }; + bannerCommenter = derive2 { name="bannerCommenter"; version="1.0.0"; sha256="1i0b3v4n0xylcbrg9i3a28z037m27vjfg61xz2hl99wavn0bsl1j"; depends=[]; }; banter = derive2 { name="banter"; version="0.9.3"; sha256="1ziys0zy66477ynr8rp2kv7w82n6226whn47aa06kkb4nhcqfk2c"; depends=[dplyr ggplot2 gridExtra magrittr plyr randomForest ranger rfPermute rlang tibble tidyr]; }; banxicoR = derive2 { name="banxicoR"; version="0.9.0"; sha256="0vchm2hnqm45fhn8k38rcam4vkazmifcl40390s2r04bgvqr0pnl"; depends=[rvest stringr xml2]; }; bapred = derive2 { name="bapred"; version="1.0"; sha256="08kvc4cc984jv08ikwbja8zxidrcdiwi5w88hlqakbm8yc6hzssa"; depends=[affy affyPLM Biobase FNN fuzzyRankTests glmnet lme4 MASS mnormt sva]; }; barcode = derive2 { name="barcode"; version="1.1"; sha256="14zh714cwgq80zspvhw88cs5b82gvz4b6yfbshj9b7x0y2961nxd"; depends=[lattice]; }; + bardr = derive2 { name="bardr"; version="0.0.9"; sha256="02499b3j10j7qq3whz9qijfp3amp0s1ji8qk76c53dsnkj8f9hvs"; depends=[]; }; barplot3d = derive2 { name="barplot3d"; version="1.0.1"; sha256="182kpiknv3id1bsgcc6b3ahbxmm8x3lxcpf1r6rckpr3s0whfx3g"; depends=[rgl]; }; - barsurf = derive2 { name="barsurf"; version="0.6.1"; sha256="1qhmzhj4c1qbgafhq6j4rrmc51bh1ymm42vsl2wxwklyfs7qwl66"; depends=[colorspace kubik]; }; + barsurf = derive2 { name="barsurf"; version="0.7.0"; sha256="0y6z2qwa12bnf8arfpkj4zbgfh2firvczw01hnsvd98h11bbx0zx"; depends=[colorspace kubik]; }; bartBMA = derive2 { name="bartBMA"; version="1.0"; sha256="15syk5a3lgzfyp17wk8mk14317yxsr47br26kyah5jg3dq4cyqdg"; depends=[BH mvnfast Rcpp RcppArmadillo Rdpack]; }; bartCause = derive2 { name="bartCause"; version="1.0-4"; sha256="1a1g4376l31pswxmmipm0xm3zazm1kfm3iwknjx6pchjavjhin9y"; depends=[dbarts]; }; bartMachine = derive2 { name="bartMachine"; version="1.2.6"; sha256="0zw42ffgyx08skl00a428f7gylby2rm8i0jpv6b1md557l1w06jy"; depends=[bartMachineJARs missForest randomForest rJava]; }; @@ -5724,39 +5931,43 @@ in with self; { base64enc = derive2 { name="base64enc"; version="0.1-3"; sha256="13b89fhg1nx7zds82a0biz847ixphg9byf5zl2cw9kab6s56v1bd"; depends=[]; }; base64url = derive2 { name="base64url"; version="1.4"; sha256="0n1c2b68vza1dh7sk38v6biiwm72c4jpl79kpdg1bsb0hq9qy18x"; depends=[backports]; }; baseballDBR = derive2 { name="baseballDBR"; version="0.1.2"; sha256="0w54g1avcqamc12lmvjchlqbqck9jfjccm441k03nsql460mpydq"; depends=[dplyr magrittr rvest xml2]; }; - baseflow = derive2 { name="baseflow"; version="0.12.1"; sha256="17ggwgkz36cq6pp88vfa24gfrwsvgmv5vizp5mqaqrssqji0vsgy"; depends=[airGR]; }; - basefun = derive2 { name="basefun"; version="1.0-7"; sha256="1g72g77yzf6ji4aglm4hpaqbz5ma2d6y93g7r17066iwyzl0ygn3"; depends=[Matrix orthopolynom polynom variables]; }; + basecamb = derive2 { name="basecamb"; version="1.0.1"; sha256="0xx73z7dnfh7qbawnb9kkcnwwyvb3w3gbyjf6x0k4dqndb4zx99s"; depends=[assertive_types assertthat Hmisc mice]; }; + basedosdados = derive2 { name="basedosdados"; version="0.0.5"; sha256="06cjz0ai0lyslrhwb3h6gxxg764027hjv6rcq6b6f0fcgbb950ig"; depends=[bigrquery cli dotenv dplyr glue googleAuthR httr magrittr purrr readr rlang stringr tibble writexl]; }; + baseflow = derive2 { name="baseflow"; version="0.13.2"; sha256="02ygx32dfszk66f33wfszkvwi51v8zw2s45y9nlrgfws9rlpzll2"; depends=[airGR]; }; + basefun = derive2 { name="basefun"; version="1.1-0"; sha256="17lrqi317hr21hirxxx931sfzqr19dadlb7jz16njsag1sjzmasv"; depends=[Matrix orthopolynom polynom variables]; }; baseline = derive2 { name="baseline"; version="1.3-1"; sha256="1spmp8z0hrb6db0r52i16524cp9zy1d1hr4y3b3i9q38m1iskpms"; depends=[limSolve SparseM]; }; basetheme = derive2 { name="basetheme"; version="0.1.2"; sha256="0yck4qc7qd406s7kw95xgnfc0pfvzk3ylhkv6mk6l2wbkfm8ldrb"; depends=[]; }; basf = derive2 { name="basf"; version="0.2.0"; sha256="0l3y5p51jic3b8h1jclhhma4myll1g3vsxr8rj0dx1bvjfimkryw"; depends=[raster sf tibble]; }; basicMCMCplots = derive2 { name="basicMCMCplots"; version="0.2.6"; sha256="057w8xzr0d3jvphhsq55ph9ck5hf4kiihfj57xbbyqx8biyfrjhc"; depends=[]; }; basicTrendline = derive2 { name="basicTrendline"; version="2.0.5"; sha256="0402nvm3i32sx3m3c7r74iaj22h570v819yiwkraicjpmg55dghi"; depends=[investr scales]; }; basicspace = derive2 { name="basicspace"; version="0.24"; sha256="1cy226njbax7dcgql89fns4l4w9fq328x3h0vb93l5jk883jgi8h"; depends=[]; }; - basictabler = derive2 { name="basictabler"; version="0.3.1"; sha256="1yrrg0mgxfqrn068ggx7b5xqj8wccigb5x6aya2hw3b035cbfprs"; depends=[dplyr htmltools htmlwidgets jsonlite R6]; }; - basket = derive2 { name="basket"; version="0.10.2"; sha256="0d3qp1p11w9warl4cd9icnygqyiarm6vzsnph2hl09lmsqbghahl"; depends=[cli crayon dplyr foreach GenSA ggplot2 ggraph gridExtra igraph itertools RColorBrewer tibble tidygraph tidyr]; }; + basictabler = derive2 { name="basictabler"; version="1.0.0"; sha256="0mkfa0ybq3v3ds038b7j73k8j3c597gdfp5qwkfkbbma6aylqq48"; depends=[dplyr htmltools htmlwidgets R6]; }; + basifoR = derive2 { name="basifoR"; version="0.3"; sha256="0m9d04ir4y7iliz3ps0ps13kaaypdpihym4szl8qhclbpp09ivxy"; depends=[foreign Hmisc httr measurements RODBC]; }; bastah = derive2 { name="bastah"; version="1.0.7"; sha256="08xdba16wj0inp0kq2sbcrdr6wj8bwlq7rqnfrzjrz03wxhc5bk0"; depends=[BigQuic foreach glmnet lars MASS Matrix scalreg]; }; - batade = derive2 { name="batade"; version="0.1"; sha256="1lr0j20iydh15l6gbn471vzbwh29n58dlpv9bcx1mnsqqnsgpmal"; depends=[hwriter]; }; - batata = derive2 { name="batata"; version="0.1.1"; sha256="0qz1apzr9qih2lnkwgncf6hdpl6knn1ifn567a3ysc822y8hbb3n"; depends=[fs glue lubridate]; }; + batata = derive2 { name="batata"; version="0.2.1"; sha256="0z3pj37jydidw3lq1yvp1yv1vqbm28nhj0v4kb3n30dl00kd0hmy"; depends=[fs glue jsonlite lubridate purrr remotes]; }; batch = derive2 { name="batch"; version="1.1-5"; sha256="0wdgfvk2i542cqg34ikvzwlix09f2jyjb32a0f4zh9vg9nrywswq"; depends=[]; }; batchmeans = derive2 { name="batchmeans"; version="1.0-4"; sha256="0b2npqxrv08zxj59sahj5s87inhl6dyl10bj01v0l1yr14q5g546"; depends=[]; }; + batchr = derive2 { name="batchr"; version="0.0.1"; sha256="1gdd16la1k8md9p2iw8rfqw9hiav5gd67zfhcpd1lq2kwr1gsxzj"; depends=[chk cli furrr hms hmstimer yesno]; }; batchscr = derive2 { name="batchscr"; version="0.1.0"; sha256="094l2cq7lcdrlsdmsxmbal7srxdg20rxbms46h1sd414wq26d413"; depends=[]; }; - batchtools = derive2 { name="batchtools"; version="0.9.14"; sha256="1b78r70gm4a0wzjr367hqx2rfphfkbppp14d0l5zs2fvyz166lsx"; depends=[backports base64url brew checkmate data_table digest fs progress R6 rappdirs stringi withr]; }; + batchtools = derive2 { name="batchtools"; version="0.9.15"; sha256="0d2xy77hkzhcnyz8zxcv98i80fx6ripjw4rvyx4ww1d0vjjgqf52"; depends=[backports base64url brew checkmate data_table digest fs progress R6 rappdirs stringi withr]; }; batman = derive2 { name="batman"; version="0.1.0"; sha256="0ccgx506p4iri23k2ikb8jmh04dp08w66785bv52iy8kd359h43f"; depends=[Rcpp]; }; batteryreduction = derive2 { name="batteryreduction"; version="0.1.1"; sha256="0j838q7063bplkzd50kmnxji80cgysfsq7m1qifv8z7a2zsh8c8g"; depends=[pracma]; }; baycn = derive2 { name="baycn"; version="1.2.0"; sha256="1ykz1brs3mz94n86d5qaq25vf24j5adyzpddxqmn7qklbxxr6fh5"; depends=[egg ggplot2 gtools igraph MASS]; }; bayefdr = derive2 { name="bayefdr"; version="0.1.0"; sha256="1c40jvdhbc23yvqiidjgs2f0p3mp3zw9wq0ap1d91if99p6him7n"; depends=[assertthat ggplot2 reshape2]; }; - bayes4psy = derive2 { name="bayes4psy"; version="1.2.5"; sha256="0lvbp41icr0njyfk87vw2ald8zpmp0gvjabpwaiq2h1km1527yic"; depends=[BH circular cowplot dplyr emg ggplot2 mcmcse metRology Rcpp RcppEigen reshape rstan rstantools scales StanHeaders]; }; + bayes4psy = derive2 { name="bayes4psy"; version="1.2.6"; sha256="1w9yjgz2ziclffkzyw1rrny1ynmd7q1bbyjmp0wbmb4v1xhz83qr"; depends=[BH circular cowplot dplyr emg ggplot2 mcmcse metRology Rcpp RcppEigen reshape rstan rstantools scales StanHeaders]; }; bayesAB = derive2 { name="bayesAB"; version="1.1.2"; sha256="0xg29s3h4dy43snlc365q80ix96hwh4mfy1qvv87yys3i9zfinm5"; depends=[ggplot2 Rcpp rlang]; }; bayesCT = derive2 { name="bayesCT"; version="0.99.3"; sha256="0ragig1x34syhsnbnd58l2s7g23j7fb0cl9wkasvxq8cicw5hqgn"; depends=[bayesDP dplyr magrittr purrr survival]; }; - bayesDP = derive2 { name="bayesDP"; version="1.3.3"; sha256="0g2kw8rsa9s5ahvsr4j363nqs4s49pmbaxgsqrlg8nizjsmj8p49"; depends=[ggplot2 MCMCpack Rcpp RcppArmadillo survival]; }; + bayesDP = derive2 { name="bayesDP"; version="1.3.4"; sha256="1xhqkymgn2h3ar4iwbdzpcw154adszcgx81sdx0wq3s033sx0cpk"; depends=[ggplot2 MCMCpack Rcpp RcppArmadillo survival]; }; + bayesDccGarch = derive2 { name="bayesDccGarch"; version="2.2"; sha256="1c6nacylnfmpbd53x8bwxf97qg8ai3vcq4d60xfpmdxrfkfvfgqm"; depends=[coda numDeriv]; }; bayesGAM = derive2 { name="bayesGAM"; version="0.0.1"; sha256="072q3kybnxjwc4s6qlww492cg43cr4zk6midyp5av7y3hnxbmqm8"; depends=[bayesplot BH boot cluster corrplot geometry ggplot2 gridExtra loo MASS mlbench Rcpp RcppEigen RcppParallel rstan rstantools SemiPar StanHeaders]; }; - bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.5"; sha256="01lmpi659cisr7rixz8khaxzyvkvdkvcxjj37x3lw7dpf4ir2535"; depends=[coda mvtnorm]; }; - bayesImageS = derive2 { name="bayesImageS"; version="0.6-0"; sha256="1m0az3z8hwaxpqd1ljly9vlp41dp7c7p39r0rx7k9vcs201vlcg8"; depends=[Rcpp RcppArmadillo]; }; - bayesLife = derive2 { name="bayesLife"; version="4.1-0"; sha256="1sswnwv4x77sd07d3hpsf3wfd5szrdnc4fni8glzl8rk3y0r3jns"; depends=[bayesTFR car coda data_table hett wpp2019]; }; + bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.8"; sha256="0yqclffsihf5fgj386600zwkjb6wzg8ahw4drqim6ia9izpgbyyh"; depends=[coda mvtnorm]; }; + bayesImageS = derive2 { name="bayesImageS"; version="0.6-1"; sha256="0hz6ynvrhsxp097zswdlascza5n27cq4hfaqdc3r8b7crmh7lrim"; depends=[Rcpp RcppArmadillo]; }; + bayesLife = derive2 { name="bayesLife"; version="5.0-1"; sha256="1ydqc6f7dbvll1nljpxw4vr2fwwfd3d62py694b3gl1byc2m3phj"; depends=[bayesTFR car coda data_table hett wpp2019]; }; bayesPop = derive2 { name="bayesPop"; version="8.1-3"; sha256="018nwm6nmg0cpgkmiiqijry59f1adx103wy5dgz8a64f9hj4nqdi"; depends=[abind bayesLife bayesTFR data_table fields googleVis MortCast plyr reshape2 rworldmap wpp2012 wpp2019]; }; bayesQR = derive2 { name="bayesQR"; version="2.3"; sha256="1c6y7r9h9626ghp68pl5k1g0l95fwd6dp0jfznmhy53qza0ny8z4"; depends=[]; }; bayesSurv = derive2 { name="bayesSurv"; version="3.3"; sha256="00brysldz0zbjbjs0qnd2mbpc3ipyz7224bnbwlf8d3b6ivw8iwv"; depends=[coda smoothSurv survival]; }; - bayesTFR = derive2 { name="bayesTFR"; version="6.4-0"; sha256="159lcii3hpl91vypl16adzair6ik85fyjybyy6fjibxvjkn3fh3b"; depends=[coda MASS mvtnorm wpp2019]; }; + bayesTFR = derive2 { name="bayesTFR"; version="7.0-4"; sha256="0zcgbfn07s60d3xpjmisfi4lkjcr5hl3z491zm7xripdmsanrqyd"; depends=[coda data_table MASS mvtnorm wpp2019]; }; + bayesZIB = derive2 { name="bayesZIB"; version="0.0.1"; sha256="10j7q589s59ygi02p92palj9fgbxvvmjrxc3lr69lykfzr32nxmf"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; bayesammi = derive2 { name="bayesammi"; version="0.1.0"; sha256="1vfcmk47x71c5akj3ppxzb74293pikspknkkv08f8p15v0chk7fs"; depends=[dplyr ggplot2 lme4 magrittr MASS mvtnorm rlang rstiefel scales tibble tidyr tmvtnorm]; }; bayesanova = derive2 { name="bayesanova"; version="1.4"; sha256="1azr1yjigy3hygvzngs6b0m92kskxv0kga80j7ccsycawygmkjcs"; depends=[]; }; bayesbio = derive2 { name="bayesbio"; version="1.0.0"; sha256="08qa4lzkrcwin7n3kzfqfdlnlqahdmjl1lxpdh29n780cgyjfvs0"; depends=[]; }; @@ -5764,121 +5975,128 @@ in with self; { bayesbr = derive2 { name="bayesbr"; version="0.0.0.1"; sha256="0f2sy2m417fzznlp2k2ag2xj6jdn027gibsi0cxhlk189pxxfxri"; depends=[BH coda dplyr fdrtool Formula ggplot2 loo magrittr Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders stringr tidyr]; }; bayescopulareg = derive2 { name="bayescopulareg"; version="0.1.3"; sha256="0jzj1iwd8g1kpypg6dl3anhay7kjvznfkyzri3sdf538s6vr88m5"; depends=[mvtnorm Rcpp RcppArmadillo RcppDist]; }; bayescount = derive2 { name="bayescount"; version="0.9.99-5"; sha256="0c2b54768wn72mk297va3k244256xlsis9cd6zn6q5n1l7ispj6j"; depends=[coda rjags runjags]; }; - bayesdfa = derive2 { name="bayesdfa"; version="0.1.6"; sha256="1syghmscp3fyak8kcvdvhsp3c6qp8yd044ycrmglmy4whny2iwl7"; depends=[BH dplyr ggplot2 loo Rcpp RcppEigen reshape2 rlang rstan rstantools StanHeaders]; }; + bayesdfa = derive2 { name="bayesdfa"; version="0.1.7"; sha256="1g53z8s186ab83454qa4jpg56z3vpwifvrc78fnl0xaycnmyrpwn"; depends=[BH dplyr ggplot2 loo Rcpp RcppEigen RcppParallel reshape2 rlang rstan rstantools StanHeaders viridisLite]; }; bayesdistreg = derive2 { name="bayesdistreg"; version="0.1.0"; sha256="04slvxzbqdi2ak3dlw4lfx55rhw28js8yjmvjpy8vvgq39vcx3dq"; depends=[MASS sandwich]; }; + bayesforecast = derive2 { name="bayesforecast"; version="0.0.1"; sha256="1k5kxj5rgsciqb51870xf1y0kqkf9sdqvn2ddaw36l4df3gdlf60"; depends=[astsa bayesplot BH bridgesampling forecast ggplot2 gridExtra loo lubridate MASS prophet Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders zoo]; }; + bayesian = derive2 { name="bayesian"; version="0.0.3"; sha256="1isywa9jz4bbz4ib1f5hwvfp2qy042zxakaq1lj1056ib3vfiqb1"; depends=[brms dplyr parsnip purrr rlang tibble]; }; bayesianETAS = derive2 { name="bayesianETAS"; version="1.0.3"; sha256="0nbif0b6lcik2kh948zg5ska5mvkdsfr0dg8ndnfpscm2mp7y1dg"; depends=[]; }; - bayeslincom = derive2 { name="bayeslincom"; version="1.0.0"; sha256="16wy946c05hq6bfn3h364s597wipzwxvdbpq8j2ja0rcsq5x9vw3"; depends=[ggplot2 lifecycle]; }; + bayeslincom = derive2 { name="bayeslincom"; version="1.1.0"; sha256="025bf6lsh3ig3nl369fmp3kxrpd1bjrjd3hkjijsid86l0fl5a8n"; depends=[ggplot2]; }; bayesloglin = derive2 { name="bayesloglin"; version="1.0.1"; sha256="0j2ziahf6mwsz2gvb1azvdzlmszlpqgr5zqcqa68pxgq947sa2cs"; depends=[igraph]; }; bayeslongitudinal = derive2 { name="bayeslongitudinal"; version="0.1.0"; sha256="0g45ikpnbry1albb3asrzab5z3sy98yf74c64qn02d65xgafifwg"; depends=[LearnBayes MASS mvtnorm]; }; bayesm = derive2 { name="bayesm"; version="3.1-4"; sha256="154glks7rsjkza0sfi1kj7wj727py9sl1ba6sswflwmwc9n226q6"; depends=[Rcpp RcppArmadillo]; }; bayesmeta = derive2 { name="bayesmeta"; version="2.6"; sha256="1wg736y4ccicradwaglx3x9bqkbq6v4qrza6zmqdm3f8f8css9j1"; depends=[forestplot metafor numDeriv]; }; - bayesmix = derive2 { name="bayesmix"; version="0.7-4"; sha256="1qms1nnk2nq3gqr8zf2b9ri4wv8jrxv5i8s087k1rwdvya3k5r9a"; depends=[coda rjags]; }; - bayesmove = derive2 { name="bayesmove"; version="0.1.0"; sha256="1ldccziayhf8hd9kjbrg7xr50b7cqay4annbym3x5180h7zkh7qc"; depends=[dplyr furrr future ggplot2 lubridate magrittr MCMCpack progress purrr Rcpp RcppArmadillo rlang tictoc tidyr]; }; - bayesplot = derive2 { name="bayesplot"; version="1.7.2"; sha256="0aqy4bfjq1fmds0vpacsmqih528cp8wk4v4w0balzkph6zqzpwcl"; depends=[dplyr ggplot2 ggridges glue reshape2 rlang tibble tidyselect]; }; + bayesmix = derive2 { name="bayesmix"; version="0.7-5"; sha256="0s1a221vwia92pinja2r5b5abm4dhcrs81m4frqnf0522qh0y75f"; depends=[coda rjags]; }; + bayesmove = derive2 { name="bayesmove"; version="0.2.0"; sha256="1ir8zasnymfll6za35kzsgdfm6l5hryrss2aa3m07zzd2rb53xbc"; depends=[dplyr dygraphs furrr future ggplot2 leaflet lubridate magrittr MCMCpack move progress purrr Rcpp RcppArmadillo rlang sf shiny tictoc tidyr]; }; + bayesplot = derive2 { name="bayesplot"; version="1.8.0"; sha256="0j69a78l5z0wyxcz607amaa4jc8kwwvcia9wxyir65b8ks9gj1d6"; depends=[dplyr ggplot2 ggridges glue reshape2 rlang tibble tidyselect]; }; bayespref = derive2 { name="bayespref"; version="1.0"; sha256="0gwlzs7qkgmf90np7xv85d27jjqggyhfj00vpya664a2znyjb3jm"; depends=[coda lattice MASS MCMCpack RColorBrewer]; }; - bayesreg = derive2 { name="bayesreg"; version="1.1"; sha256="12g5sklip3i8fpzrhvbikhgnl6kx8fxb88hfv8f34jy71r3h7zyp"; depends=[pgdraw]; }; + bayesreg = derive2 { name="bayesreg"; version="1.2"; sha256="0yrx7y39xxmm0z4myj6ma24dkkhgcily5baxr6yf9balgvhd5wf4"; depends=[pgdraw]; }; bayess = derive2 { name="bayess"; version="1.4"; sha256="0axipk5hn2hw3g4dfh7y3xa0dxqmi8kqpbr77nl14y7ydpija6xm"; depends=[combinat gplots MASS mnormt]; }; bayest = derive2 { name="bayest"; version="1.4"; sha256="1ax1z5aw0irpr5qmfscvbssrz58ablx0nkl0d9fx51f2g1cwm65n"; depends=[MCMCpack]; }; - bayestestR = derive2 { name="bayestestR"; version="0.8.0"; sha256="11mxnpqc85y13wf8mnnrh0k8d3jqdsr99hkv4cgvwav38qpvjhhw"; depends=[insight]; }; + bayestestR = derive2 { name="bayestestR"; version="0.9.0"; sha256="0msr24ymnazpaz8s9qs5v3xn1i9984p98lr9x4qq9cxgx34rm9h0"; depends=[insight]; }; bayesvl = derive2 { name="bayesvl"; version="0.8.5"; sha256="1gb2in8hjiqb3daqz6phn1639i6p2w641kxrm3zh4rm3d6hg6hzr"; depends=[bayesplot bnlearn coda dplyr ggplot2 reshape2 rstan StanHeaders viridis]; }; bayfoxr = derive2 { name="bayfoxr"; version="0.0.1"; sha256="1295296mbjpmd0bg1pfxvyp0az3sry6gsq9ir3l8x64w5a4qrzd5"; depends=[]; }; - baymedr = derive2 { name="baymedr"; version="0.1.0"; sha256="0y01s6dpnhnxqqvl15cdxmb5ysb685bbp47xifyp5nz8sjh2pci0"; depends=[rlang stringr]; }; + baymedr = derive2 { name="baymedr"; version="0.1.1"; sha256="0lsp9g9xjwwf2znh4vld41pgdn55ncvmdsyg84ifhdqzjrsgwc6f"; depends=[rlang stringr]; }; baystability = derive2 { name="baystability"; version="0.1.0"; sha256="1zv4bf5a4p21w2qpr6lcsgsxb0xv15v8p33031rsypmnbs9i80dp"; depends=[dplyr ggfortify ggplot2 lme4 magrittr MASS matrixStats reshape2 rlang rstiefel scales tibble tidyr tidyverse]; }; - baytrends = derive2 { name="baytrends"; version="2.0.2"; sha256="07dkc9v5w6f4g5md1qgrsk2sy8sn6aaq9m1bm9810gswks6mlflq"; depends=[dataRetrieval digest lubridate memoise mgcv plyr survival XML]; }; + baytrends = derive2 { name="baytrends"; version="2.0.4"; sha256="1rm6vx0mrmdppigzl0ig3ibni5lj5vv1ihn6ibhylm9fq16rqvyd"; depends=[dataRetrieval digest lubridate memoise mgcv plyr survival]; }; bazar = derive2 { name="bazar"; version="1.0.11"; sha256="1q2w5pvlb51lzbb5k719sf1lrhffandkfqlcvi2prw4dmq7qjxv9"; depends=[kimisc]; }; + bbdetection = derive2 { name="bbdetection"; version="1.0"; sha256="1j6xcbfsrg3wcr1rpddj7ia33szn5bs0wk4mzq42d761clsr5qq8"; depends=[ggplot2 Rcpp xtable zoo]; }; bbefkr = derive2 { name="bbefkr"; version="4.2"; sha256="1wjx652w3p41sq71a2zdzmb7frjxm6xvcgrc2ark2spwb0lbjjw6"; depends=[]; }; bbemkr = derive2 { name="bbemkr"; version="2.0"; sha256="015c57s8mpimm82nddnh382wlkisxgdmc2hvp7k38pcnqxc5gb5q"; depends=[MASS]; }; - bbl = derive2 { name="bbl"; version="0.3.1"; sha256="1a6f5744xwn28qkqxlc5q7crarlx0jjg4z7wpp7jwr6ar152apvm"; depends=[pROC RColorBrewer Rcpp]; }; + bbl = derive2 { name="bbl"; version="0.4.0"; sha256="1xipzyz8gw0cnwwy0hspsbb6dby01rfyzafg5qvbg9a9f0j543f0"; depends=[pROC RColorBrewer Rcpp]; }; bbmle = derive2 { name="bbmle"; version="1.0.23.1"; sha256="0p3l9shbr2846qmw8n0fyzf4j7gmi08aypl82jml3dwh26q1whk0"; depends=[bdsmatrix lattice MASS Matrix mvtnorm numDeriv]; }; bbo = derive2 { name="bbo"; version="0.2"; sha256="19xrbla3bb3csg3gjjrpkgyr379zfwyh293bcrcd6j8rnm6g4i01"; depends=[]; }; - bbotk = derive2 { name="bbotk"; version="0.2.2"; sha256="06iz6gyymcxkbjiw049v1dk3vjfni646z247q08i2s0x59sqfqxv"; depends=[checkmate data_table lgr mlr3misc paradox R6]; }; + bbotk = derive2 { name="bbotk"; version="0.3.2"; sha256="0bd9nxfgsj4ixpgky1mj6knb8l8nivvxpqpyw8vgpkj0za7gp4gr"; depends=[checkmate data_table lgr mlr3misc paradox R6]; }; bbreg = derive2 { name="bbreg"; version="2.0.1"; sha256="0wixhqfw8yp37874zwqb4vwi9xrzlkb761lbw7h70bds0dy6jcg5"; depends=[expint Formula pbapply statmod]; }; bbricks = derive2 { name="bbricks"; version="0.1.4"; sha256="1hv4hvnns9vgl6c3n7kg3g9mfcp26ksps29hdl5nwi28cgkx80w2"; depends=[]; }; - bbsBayes = derive2 { name="bbsBayes"; version="2.3.5.2020"; sha256="02fnj9935i611znj50d4cyilzh69kwqfynhh0irwkvnsc1v1470w"; depends=[dplyr geofacet ggplot2 ggrepel jagsUI latticeExtra progress rappdirs rgdal sbtools sf stringr]; }; + bbsBayes = derive2 { name="bbsBayes"; version="2.3.6.2020"; sha256="1h64lz95pkckqlmdsdnh6a4z42silj3lk6bl7rnnxdzb5ra6ra97"; depends=[dplyr geofacet ggplot2 ggrepel jagsUI latticeExtra progress rappdirs rgdal sbtools sf stringr]; }; bbw = derive2 { name="bbw"; version="0.1.3"; sha256="1z3an561qh0rfi3jhh1ghsdbg8aimqmf4hpqri2jz39in3p0gwg4"; depends=[car]; }; bc3net = derive2 { name="bc3net"; version="1.0.4"; sha256="15dghd0v1s71h77iw8b49v5h7wcda5mb4540lfyibsdipbashv2h"; depends=[c3net igraph infotheo lattice Matrix]; }; bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-4"; sha256="0bhwwr9pa78a8lhjz2cfbm09jq585p89l6dr2ihpil4q5r8cmsjr"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; bcTSNE = derive2 { name="bcTSNE"; version="0.10.0"; sha256="1109kgrrpizhg7j1wbkk6f84hsw89xk2l6vwxpjpg6rh50z3bfi6"; depends=[RSpectra Rtsne]; }; bcaboot = derive2 { name="bcaboot"; version="0.2-1"; sha256="0wf1igkb0lidz4pvh3kfccs9858m1g9650wprrvrpwsdfrcd7rc9"; depends=[]; }; bcc = derive2 { name="bcc"; version="1.3.1"; sha256="0ac0wasdifd0v47r9sxrsix5hv7masiphn6dyxpqdrd11z7iimgz"; depends=[qcc]; }; - bccp = derive2 { name="bccp"; version="0.1.0"; sha256="142aszl8cvikb9ni0n7jc7bi1nfc5rf67vy1a6ind3g3iz931bgb"; depends=[pracma]; }; - bcdata = derive2 { name="bcdata"; version="0.2.1"; sha256="0k0vrh02chkziyq6pvn745n1ncnzxklzsxq1dmy4221zvg8khjsg"; depends=[cli crul DBI dbplyr dplyr glue jsonlite leaflet leaflet_extras purrr readr readxl rlang sf tibble tidyselect xml2]; }; + bccp = derive2 { name="bccp"; version="0.3.0"; sha256="06qmssf1hcnlssq8liyrh1fzvkfmlvqyagj0fia2g28jx90a7iir"; depends=[pracma]; }; + bcdata = derive2 { name="bcdata"; version="0.2.4"; sha256="07l47gpzd6r465xad1bc0w44yzy87qa3j0vpa6pv61h30pph43zh"; depends=[cli crul DBI dbplyr dplyr glue jsonlite leaflet leaflet_extras purrr readr readxl rlang sf tibble tidyselect xml2]; }; bcf = derive2 { name="bcf"; version="1.3"; sha256="1f8szjgsyhnff3zzmmy7bnsam12ywj46n3fxsj1y3fn1m5wnd8mz"; depends=[Rcpp RcppArmadillo]; }; bcfrailph = derive2 { name="bcfrailph"; version="0.1.0"; sha256="0l5v3bc8xw71cj012sbmq1f0glg7m545jzqyg01gzl8kbgm3lbbj"; depends=[survival]; }; bcfrailphdv = derive2 { name="bcfrailphdv"; version="0.1.0"; sha256="06xzz5m4s5fp36j3saxmpw1p0bhh42cjd35cadwkk3vg836kj1na"; depends=[bcfrailph survival]; }; bcgam = derive2 { name="bcgam"; version="1.0"; sha256="1dg2fcjw8xal77irviiz260qpar2iqkjvi2k4qfm71jyq0ir0axk"; depends=[coda igraph nimble]; }; - bcmaps = derive2 { name="bcmaps"; version="0.18.1"; sha256="11gj4f0qqgcvyri8zsnfzk02y9xyiwkfy18wahrg4zrpb4ai78zp"; depends=[httr rappdirs sf]; }; + bcmaps = derive2 { name="bcmaps"; version="1.0.2"; sha256="029h92v9kp266gjw0abdgiyq76rzplnd5m1pc80ip9kip52vha7y"; depends=[bcdata httr jsonlite progress rappdirs sf xml2]; }; bcmixed = derive2 { name="bcmixed"; version="0.1.4"; sha256="0am6amk1axfxkxgp9nmfys4fp4snplfncwkzh02im7a6zr3v1m63"; depends=[MASS nlme]; }; bcp = derive2 { name="bcp"; version="4.0.3"; sha256="0vhs89lb2wpanqsljclpvwbjmgdsc3jicws8bzqiqh8mbs3nzpxy"; depends=[Rcpp RcppArmadillo]; }; bcpa = derive2 { name="bcpa"; version="1.1"; sha256="0rwbd39szp0ar9nli2rswhjiwil31zgl7lnwm9phd0qjv8q0ppar"; depends=[plyr Rcpp]; }; bcpmeta = derive2 { name="bcpmeta"; version="1.0"; sha256="02fw1qz9cvr7pvmcng7qg7p04wxxpmvb2s8p78f52w4bf694iqhl"; depends=[mvtnorm]; }; - bcr = derive2 { name="bcr"; version="0.1.1"; sha256="0ahd1y73sn45ygvklq22790kf2x8ciw672qrpjnq9mai4ica8y1c"; depends=[httr jsonlite]; }; bcrm = derive2 { name="bcrm"; version="0.5.4"; sha256="1j8bfa3x7h77vs41k4nqbqlb961szp1fkhc181wzb3zpbnzmjhhy"; depends=[ggplot2 knitr mvtnorm rlang]; }; bcrypt = derive2 { name="bcrypt"; version="1.1"; sha256="1wwdin8x09y8n8zrwj1ylh5ikcz0v0la4wmrsvbdr61cg336wzx4"; depends=[openssl]; }; - bcv = derive2 { name="bcv"; version="1.0.1.1"; sha256="18knmzri856kkwcc224b33vz9526r3y6j3ii4wj3qwc6f3c52s05"; depends=[]; }; + bcv = derive2 { name="bcv"; version="1.0.1.4"; sha256="1iln1blr2sdjjv66g73jkj26h1kzfs2sfvw5k7b76mgc0703k45s"; depends=[]; }; bdDwC = derive2 { name="bdDwC"; version="0.1.15"; sha256="0yraq8a0wgz12rzi2dx0gdcz5rx99qd2pzw972wjqyq3rs41pwx0"; depends=[shiny shinyBS shinydashboard shinyFiles shinyjs]; }; - bda = derive2 { name="bda"; version="15.1.7"; sha256="0di21yahkyj6hrjpij3pr2545lgzzdkk6byxmahxc6pcp6l9y2yl"; depends=[]; }; + bda = derive2 { name="bda"; version="15.2.2"; sha256="19lccvv3c1fmxy05idlh9ci70056l6i6nmwlwnj405zqripk42kl"; depends=[boot]; }; bdchecks = derive2 { name="bdchecks"; version="0.1.7"; sha256="1pzsvn1m1f9bdmhxmh57pvn9jm4z41rkvv6h60hq2lfgkapnjy7q"; depends=[bdDwC data_table DT finch knitr rgbif shiny shinyBS shinydashboard shinyjs spocc yaml]; }; bdclean = derive2 { name="bdclean"; version="0.1.15"; sha256="14cy8yaqd6bg2zyh2wvndydk9sigaydavxl4cfypqz5kqdhj82z9"; depends=[bdchecks bdDwC data_table DT finch knitr leaflet rgbif rmarkdown shiny shinydashboard shinyjs spocc]; }; bde = derive2 { name="bde"; version="1.0.1"; sha256="1f25gmjfl58x4pns89abfk85yq5aad3bgq9yqpv505g5gxk62d3v"; depends=[ggplot2 shiny]; }; + bdl = derive2 { name="bdl"; version="1.0.3"; sha256="1p33lx50789v2k2j3c95n5pzzgxrn3lb9w6a6kx710p8cbbdyfxp"; depends=[dplyr ggplot2 ggpubr httr jsonlite magrittr purrr randomcoloR sf tibble tidyr tmap tmaptools]; }; + bdlp = derive2 { name="bdlp"; version="0.9-2"; sha256="14fxwgcn3g6k1cdimgfp6zmsgqi4s7sh6kapnls229qiin2nijjl"; depends=[DBI GenOrd MASS MultiOrd rgl RSQLite stringdist]; }; + bdots = derive2 { name="bdots"; version="1.0.1"; sha256="014gxykqfh8lnbdz9w6ir8jsrb5bklgww4qhapzadym06n69c86x"; depends=[data_table mvtnorm nlme]; }; bdpar = derive2 { name="bdpar"; version="3.0.0"; sha256="128s13nrr0djcwxj55y5xdfrzq5gbq9czmvgmdbfjzpshjhndi0k"; depends=[digest R6 rlist]; }; bdpopt = derive2 { name="bdpopt"; version="1.0-1"; sha256="1z7mdqklw3frsdzyhvx8s8wvblwm28fr1gca2yrivqjng0r47lx4"; depends=[coda rjags]; }; bdpv = derive2 { name="bdpv"; version="1.3"; sha256="0wcnmamqrbqwskgv2yhnxq2kb179n63c825y9hsl20rfca0ijh6m"; depends=[]; }; bdribs = derive2 { name="bdribs"; version="1.0.4"; sha256="19qakmdw3l8vfxkr4p1ydkyfs4cmq37lqzw7l5zx5rdn6zlhqwh4"; depends=[rjags]; }; bdscale = derive2 { name="bdscale"; version="2.0.0"; sha256="1hkkfd69g2bg2y4hicjs6bnw9f0zw74jy0dpadchnzw17lffpms3"; depends=[ggplot2 scales]; }; bdsmatrix = derive2 { name="bdsmatrix"; version="1.3-4"; sha256="1sh6pg43rgqvips4fx0k4vmp5i9lmniix0bqwj2yq5m06gs227i5"; depends=[]; }; - bdvis = derive2 { name="bdvis"; version="0.2.22"; sha256="1kfkn3ak1aqqj61ryfxmq8vvmi4z4znha03ga1ncsrnpb6g1kfvk"; depends=[chron ggplot2 lattice leafletR maps plotrix plyr rgdal sqldf taxize treemap]; }; + bdvis = derive2 { name="bdvis"; version="0.2.28"; sha256="1yl2rciag3i2gx3lzycm55497wwbhyy7wmsf928bigi1jz6z2s8q"; depends=[chron ggplot2 lattice leafletR maps plotrix plyr rgdal sqldf taxize treemap]; }; bdynsys = derive2 { name="bdynsys"; version="1.3"; sha256="07gfyp0qwq9y1cnh7lhcz7q0b1s51cjwlbpll50l2cza2dszmf29"; depends=[caTools deSolve Formula Hmisc MASS matrixStats plm pracma]; }; bea_R = derive2 { name="bea.R"; version="1.0.6"; sha256="15pdbwz7av8862bl144n998qk0w9rqwip9m2brdm5hj7id5xdlif"; depends=[chron colorspace data_table DT ggplot2 googleVis gtable htmltools htmlwidgets httpuv httr jsonlite magrittr munsell plyr Rcpp scales shiny shinydashboard stringi stringr xtable yaml]; }; beadarrayFilter = derive2 { name="beadarrayFilter"; version="1.1.0"; sha256="044dq5irc00v2f2gjz0vb69w7q7b84lppc55ganabdv4f0dxdblc"; depends=[beadarray RColorBrewer]; }; beadplexr = derive2 { name="beadplexr"; version="0.4.0"; sha256="0y5xrs88zm2bp2dlz8bndldispyj6ipgjr7vzrfl26yd2p7qjqd0"; depends=[cluster dplyr drc fpc ggplot2 magrittr mclust purrr raster rlang tibble tidyr yaml]; }; - beakr = derive2 { name="beakr"; version="0.3.1"; sha256="1mir7scqwmsqs6hhi0xramdxk75x7zs4ppwrgc688y8j7dgg01ys"; depends=[base64enc httpuv jsonlite magrittr mime R6 stringr webutils]; }; + beakr = derive2 { name="beakr"; version="0.4.3"; sha256="0l6475l5d58g5ahz4b3vrdlvl656p2rasni17gz4y1l2rd0pvvh4"; depends=[base64enc httpuv jsonlite magrittr mime R6 stringr webutils]; }; beam = derive2 { name="beam"; version="2.0.2"; sha256="17c7zww1160jxm0q6vb5h59zipjjfyc3pls30y5v4vyk7kr9rdvx"; depends=[assertthat BH fdrtool igraph knitr Matrix Rcpp RcppArmadillo]; }; beanplot = derive2 { name="beanplot"; version="1.2"; sha256="0wmkr704fl8kdxkjwmaxw2a2h5dwzfgsgpncnk2p2wd4768jknj9"; depends=[]; }; beanz = derive2 { name="beanz"; version="2.4"; sha256="18i4ygz83l60fdfkl4yg9kp5n2vmqn6yd7qkpkiplq0mzg5s4nk9"; depends=[BH loo Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; beast = derive2 { name="beast"; version="1.1"; sha256="0ikbnzdzp2lv1nh5mxxanra81v4dl6svg3ywqcqd6wgzri70a4ry"; depends=[RColorBrewer]; }; beastier = derive2 { name="beastier"; version="2.2.1"; sha256="004lvqiaggpvvypqgjklydv7cfxbf4wgv9sldlxgg01pszp4c8dg"; depends=[ape assertive beautier phangorn pryr rappdirs remotes rJava stringr xml2]; }; - beats = derive2 { name="beats"; version="0.1.1"; sha256="1vg8h2lyn61lii346pf3b5vwxf5cfswmi4b5mmimvgx1ix2i6sxb"; depends=[dplyr ggplot2 lubridate purrr readr shiny zoo]; }; beautier = derive2 { name="beautier"; version="2.4"; sha256="0wd9k1faw604mbgsp6bkp85cqd0plprcc35wxwrqp6zi78p2qga8"; depends=[ape assertive pryr rappdirs seqinr stringr testit]; }; bedr = derive2 { name="bedr"; version="1.0.7"; sha256="0zpqvyjgwyqawxm8qrhcv8zq2b3yxgcqkkc87br29yrl7sjb8h6j"; depends=[data_table R_utils testthat VennDiagram yaml]; }; beepr = derive2 { name="beepr"; version="1.3"; sha256="061sfld23b516jws4llml0a4jsdk4z74rll4z58l2rvahkqsdrfp"; depends=[audio stringr]; }; - beeswarm = derive2 { name="beeswarm"; version="0.2.3"; sha256="0hy89bwv7jixlg91li1fywa77916am2whqp1m1fx1khd45g44581"; depends=[]; }; + beeswarm = derive2 { name="beeswarm"; version="0.3.1"; sha256="1jsggypyww77hkcic03kdb3fp8h938qs142xi0lapzh62bkn2pjj"; depends=[]; }; beezdemand = derive2 { name="beezdemand"; version="0.1.0"; sha256="1i6p36cfvz87k6llpibklmdbjb7vp1v38ijxaqkmv1jzc28sj3cl"; depends=[ggplot2 nlmrt nls2 nlstools reshape2]; }; befproj = derive2 { name="befproj"; version="0.1.1"; sha256="194kicmfxamy061zx0ljmvrlh8gm56fcmhj1j2qfrihklpab4xhx"; depends=[dplyr]; }; beginr = derive2 { name="beginr"; version="0.1.7"; sha256="1a1lzjmq0qimm8yrb4n6knh23gyqxgax60n95rih95sg34904d0m"; depends=[cranlogs]; }; - behaviorchange = derive2 { name="behaviorchange"; version="0.2.4"; sha256="197x6nhfvm6ac4ik3lhwyj0wp4ww9gy3xc13j988fr0rfnb293cb"; depends=[BiasedUrn data_tree DiagrammeR DiagrammeRsvg ggplot2 googlesheets gridExtra gtable magrittr png ufs viridis yum]; }; + behaviorchange = derive2 { name="behaviorchange"; version="0.4.0"; sha256="0jfh665za6fs40x0fsjya7k8jwmw841xc00g31pm2qn52srfwfwj"; depends=[BiasedUrn data_tree DiagrammeR DiagrammeRsvg ggplot2 googlesheets4 gridExtra gtable knitr rmdpartials ufs viridis yum]; }; behavr = derive2 { name="behavr"; version="0.3.2"; sha256="01ny099m2zmvlalwiq3nqkgynnxn1mdspch15lkawwd40q8s9s4p"; depends=[data_table]; }; belex = derive2 { name="belex"; version="0.1.0"; sha256="1563yngc1lvncmx3h6kgsj1r6k3hvxidh6h9rb7apxs2rq5k32ms"; depends=[XML]; }; belg = derive2 { name="belg"; version="1.4.1"; sha256="0ql1hir834hljr58gbi4gxgf939dnd7rpmyp1pxkg0042in4h0p0"; depends=[raster Rcpp RcppArmadillo]; }; bellreg = derive2 { name="bellreg"; version="0.0.1"; sha256="17a0ac5ab9yblkl3cwv9vf1l6s027r34n4lqw9fs8bfs1inxbn9p"; depends=[BH extraDistr Formula magic MASS numbers Rcpp RcppEigen Rdpack rstan rstantools StanHeaders]; }; bench = derive2 { name="bench"; version="1.1.1"; sha256="1ldqmf0anwgw6b9jgy5mnnjjncayc1x54pvjm6f5gqv0225ksdw3"; depends=[glue pillar profmem rlang tibble]; }; benchden = derive2 { name="benchden"; version="1.0.5"; sha256="1cwcgcm660k8rc8cpd9sfpzz66r55b4f4hcjc0hznpml35015zla"; depends=[]; }; - benchmarkme = derive2 { name="benchmarkme"; version="1.0.4"; sha256="0yrmkpjpqdk8p4ih2xacjdg91ydw6hsmhd0r5w738bj89nb16ln9"; depends=[benchmarkmeData doParallel dplyr foreach httr Matrix tibble]; }; + benchmarkme = derive2 { name="benchmarkme"; version="1.0.7"; sha256="0ymgsxzrvnpyvs0cff09d3lrkl12qyqx5bwammsc4vgl5ng9p69p"; depends=[benchmarkmeData doParallel dplyr foreach httr Matrix tibble]; }; benchmarkmeData = derive2 { name="benchmarkmeData"; version="1.0.4"; sha256="1n4vjkagqlm6kw2hilf4gjfcdjad0bcg652j9nl2ygbq3kdnh1vf"; depends=[dplyr tibble]; }; benchr = derive2 { name="benchr"; version="0.2.5"; sha256="1xh1n41ll50zz3v26i8lg5f92i90rc78ywnl0rczryh621whx80n"; depends=[Rcpp RcppProgress]; }; bender = derive2 { name="bender"; version="0.1.1"; sha256="07npksrj094h884lli0fjvwjc1lhcwzlsk9wx82761mka5xajv4v"; depends=[httr jsonlite R6]; }; + benford = derive2 { name="benford"; version="0.2.0"; sha256="0jklrhx0k03x3y58jqdw43s3b83fcm3b1l3hjv5b8flankny5763"; depends=[]; }; benford_analysis = derive2 { name="benford.analysis"; version="0.1.5"; sha256="0y0c7l2r9s7lg9bw4ndcqwisa5l6a2cpydn1vmz88h3yva0l68cg"; depends=[data_table]; }; bentcableAR = derive2 { name="bentcableAR"; version="0.3.0"; sha256="1gjrlv94av9955jqhicaiqm36rrgmy0avxn9y7wbp2s1sbg7fyg7"; depends=[]; }; benthos = derive2 { name="benthos"; version="1.3-6"; sha256="1vywnc6k37gpaq7g59v3qa6619svcmnd8ri5zm5l0ila2s3ccb2c"; depends=[dplyr lazyeval readr]; }; - berryFunctions = derive2 { name="berryFunctions"; version="1.19.1"; sha256="1kzvwg2yjhxcy08jvwfp0c3jl7i8kngxkbfxl9hf2pwybszvdfh9"; depends=[abind]; }; - bestNormalize = derive2 { name="bestNormalize"; version="1.6.1"; sha256="1bnsjzj3s8kxlhbbz6bqa2bm02kkga1w02isnhx5nq16jw4ir0yq"; depends=[doParallel doRNG dplyr foreach LambertW nortest recipes tibble]; }; + berryFunctions = derive2 { name="berryFunctions"; version="1.20.1"; sha256="03kccwvkc5nwpyg97dsigmwgk8nwk4j9rpn2z8gc71pcf2b3ixyj"; depends=[abind]; }; + bestNormalize = derive2 { name="bestNormalize"; version="1.7.0"; sha256="1r6fy7ijq7gh0vvbmmjrq0sgqm80m5kp250gdlimy5cgy95q6w67"; depends=[butcher doParallel doRNG dplyr foreach LambertW nortest purrr recipes tibble]; }; bestSDP = derive2 { name="bestSDP"; version="0.1.2"; sha256="1rff6jij9wmlpalzilvid8jvj2pczrchx0yrg0vhy00j64zg6jzs"; depends=[dplyr DT ggplot2 readxl rlist shiny shinyBS shinydashboard shinyjs shinythemes shinyWidgets stringr tidyr]; }; bestglm = derive2 { name="bestglm"; version="0.37.3"; sha256="1zncy958hlwyyxrp6yvq1inq6mpyrbr6cdkf8maijfirr5j8f0ya"; depends=[glmnet grpreg lattice leaps pls]; }; + bestridge = derive2 { name="bestridge"; version="1.0.5"; sha256="15p46a1niir9dda6kh36iwr7bhaw102gyww5risaq2zxs7qn90c1"; depends=[MASS Matrix pheatmap Rcpp RcppEigen survival]; }; betaboost = derive2 { name="betaboost"; version="1.0.1"; sha256="1zdyzxl2kp2i5lkiz280wz4av9wqklbn25zmq6n4yb6a579yjfn8"; depends=[gamboostLSS mboost]; }; betacal = derive2 { name="betacal"; version="0.1.0"; sha256="19wgpgf9yhckl9qx9v24f4yh055wfalphcxwm7lg68px6ap2pxl9"; depends=[]; }; betafam = derive2 { name="betafam"; version="1.0"; sha256="1nf5509alqnr5qpva36f1wb7rdnc084p170h91jv89xvzsidqxca"; depends=[]; }; - betafunctions = derive2 { name="betafunctions"; version="1.4.2"; sha256="0gag9hslqz3sa8sb4fr85gds6km5z9r8flmhs6gsgn224iamjf94"; depends=[]; }; + betafunctions = derive2 { name="betafunctions"; version="1.5.0"; sha256="0q35n55g8p6mncbgs66sn3l4cv348wzbr9y99dz9vg656iq8bcxk"; depends=[]; }; betalink = derive2 { name="betalink"; version="2.2.1"; sha256="1wskr8nh1jzcrnc8fn58lscphsvj5z9p1i1pnpfdjn60mdb09rkp"; depends=[igraph plyr stringr]; }; - betapart = derive2 { name="betapart"; version="1.5.2"; sha256="176q4zqid38hjarvislf8xchc2sh5bd3rwpd837lniz36idms6k8"; depends=[ape doParallel fastmatch foreach geometry itertools picante rcdd]; }; + betapart = derive2 { name="betapart"; version="1.5.4"; sha256="1m2rykch2vhh90s08s9s2kmmrxhp9ik32s5zkdw8991cbw2j7n68"; depends=[ape doSNOW fastmatch foreach geometry itertools picante rcdd snow]; }; betaper = derive2 { name="betaper"; version="1.1-2"; sha256="0gh5xjimg0wgv626g3y34mvgrji2aylnm89iwadg7d6g4s457ynp"; depends=[vegan]; }; - betareg = derive2 { name="betareg"; version="3.1-3"; sha256="0ik2qydr75dwaphw35l1myi50fbkw43zmkarrw8jsj8nqmz3h6fc"; depends=[flexmix Formula lmtest modeltools sandwich]; }; + betareg = derive2 { name="betareg"; version="3.1-4"; sha256="00c1l5ah74vf7ljpja4iwyf9cwcvb1c835hmc98jp2x6jrh9h1ji"; depends=[flexmix Formula lmtest modeltools sandwich]; }; betategarch = derive2 { name="betategarch"; version="3.3"; sha256="0hqvyps3lwix2fkzk18wrkhxpqhgardvib9sq1ip8gn8sn1dsi8y"; depends=[zoo]; }; bethel = derive2 { name="bethel"; version="0.2"; sha256="1zlkw672k1c5px47bpa2vk3w2906vkhvifz20h6xm7s51gmm64i0"; depends=[]; }; bets_covid19 = derive2 { name="bets.covid19"; version="1.0.0"; sha256="1pqa6zpkkcmnm9a4m3676css0fi2lp4ik6mmhfhnsr4v4kv2pq2s"; depends=[rootSolve]; }; + bettermc = derive2 { name="bettermc"; version="1.1.1"; sha256="14s5whphq5qphcavyp1fm912xxnryhv7d41b6d2vq9z5bwp595vg"; depends=[checkmate]; }; beyondWhittle = derive2 { name="beyondWhittle"; version="1.1.1"; sha256="1nr414wvfwycp3s9v592jd4gk5wdjfklk7ypqabx73k5fsxrcc0g"; depends=[BH forecast ltsa MASS MTS Rcpp RcppArmadillo]; }; bezier = derive2 { name="bezier"; version="1.1.2"; sha256="1vw5128v8h973xwa1fdm9cw2jvrldj87nd55lddlp3qsz3ag4br6"; depends=[]; }; - bfast = derive2 { name="bfast"; version="1.5.7"; sha256="0n75minka55rxpvs3qkj0c65ydn1gc3i8lkr2gdyn1adjkl5yn01"; depends=[forecast raster sp strucchange zoo]; }; - bfp = derive2 { name="bfp"; version="0.0-41"; sha256="0v3fcsg9lq6j18igvknmlws9m4mp0xh3k3y01ghk85zpzikby2r3"; depends=[Rcpp]; }; + bfast = derive2 { name="bfast"; version="1.6.0"; sha256="18v9d7qcbhva08r1zrpfvrqwrn0g3r4dz53gw8fjspcm0lrpsmlh"; depends=[forecast Rcpp Rdpack strucchangeRcpp zoo]; }; + bfp = derive2 { name="bfp"; version="0.0-42"; sha256="19azhsaa1cgpz2zs5ijmr1pcbcqjlmc0w990hbbwkk79bpc3dpn4"; depends=[Rcpp]; }; bfsMaps = derive2 { name="bfsMaps"; version="0.9.6"; sha256="0k3bwda32j0rfdkzddqf81mpaa1z73cm05xh19psa51vgrbn9gg9"; depends=[DescTools maptools rgdal rgeos rlang sp spdep]; }; bfsl = derive2 { name="bfsl"; version="0.1.0"; sha256="1hl53nis8bb1ffgkx91ij9vh680cpkb80y548y67y9w18iyd4aw4"; depends=[]; }; bfw = derive2 { name="bfw"; version="0.4.1"; sha256="1dwl6p70wbgippysl7vk8nv6rc78f6h5xl8fna98zv99qf0ib31c"; depends=[coda MASS runjags]; }; @@ -5888,63 +6106,67 @@ in with self; { bgmfiles = derive2 { name="bgmfiles"; version="0.0.6"; sha256="10qldfjjq5fx5jrrakdxc8k2pf0vp8ifg18nq56lvx9n28mqigim"; depends=[]; }; bgmm = derive2 { name="bgmm"; version="1.8.4"; sha256="1r8qd4niah18jg0lw3vqq1465likal5j7nvlgnblpidd5svn4a2n"; depends=[car combinat lattice mvtnorm]; }; bgsmtr = derive2 { name="bgsmtr"; version="0.7"; sha256="17706qims9637ppwg0vszkcm6kmvhzyrdihkgigpiv5lknhk2q3m"; depends=[CholWishart coda EDISON glmnet inline LaplacesDemon Matrix matrixcalc miscTools mnormt mvtnorm Rcpp sparseMVN statmod]; }; + bgumbel = derive2 { name="bgumbel"; version="0.0.3"; sha256="18k8dy44x49hr4s37hjrq60c3cbw0slc9gjmd8gwcbz4slix2ydk"; depends=[coda MASS MCMCpack quantreg SparseM]; }; bhm = derive2 { name="bhm"; version="1.16"; sha256="097vfpqkkbgps9wkabc1k18fa5vv0shbn1jz6g5l96xv96nvx93w"; depends=[coda ggplot2 MASS survival]; }; + bhmbasket = derive2 { name="bhmbasket"; version="0.9.2"; sha256="03xd2bglwksa4mmyq8mg286bxlc5ghsy66i3v1nlhng63lflp9wb"; depends=[doParallel foreach R2jags]; }; bhpm = derive2 { name="bhpm"; version="1.7"; sha256="0fhk2gmghibf7la864dzm19bm76525gzbj03vw0y0zwbv9shbpcp"; depends=[coda]; }; - biClassify = derive2 { name="biClassify"; version="1.0"; sha256="1jawds4b0793k3kv7apa2xscqmzbx9fxmbdkqjz1lk1kykcv7m8n"; depends=[DAAG expm fields MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; biasbetareg = derive2 { name="biasbetareg"; version="1.0"; sha256="1562zdin0y5mrp36ih11ir3h9cv49cx1l98chxd89fkj8x3c1fbg"; depends=[betareg]; }; bib2df = derive2 { name="bib2df"; version="1.1.1"; sha256="0d57883df774qqwpssmly3f1gci32yc5sgwc3x8f2rjih23s1nf6"; depends=[dplyr httr humaniformat stringr]; }; - bibliometrix = derive2 { name="bibliometrix"; version="3.0.3"; sha256="1jqcpwxzccn19rwvcq5k6fbyxqj4fbyq09k3lidij6ff648415a3"; depends=[dimensionsR dplyr DT factoextra FactoMineR ggplot2 ggraph ggrepel igraph Matrix networkD3 pubmedR RColorBrewer rio rscopus shiny shinycssloaders shinythemes SnowballC stringdist stringr tidyr]; }; + bibliometrix = derive2 { name="bibliometrix"; version="3.0.4"; sha256="05dcx6vfghip9ys7mh6vvxvyyc5cfcqs8g9ihjkiw1gk6z47c87v"; depends=[bibliometrixData dimensionsR dplyr DT factoextra FactoMineR ggplot2 ggraph ggrepel igraph Matrix networkD3 pubmedR RColorBrewer rio rscopus shiny SnowballC stringdist stringr tidyr]; }; bibliometrixData = derive2 { name="bibliometrixData"; version="0.1.0"; sha256="0fdfgqsfiq3iacj4vb3bvx98waqzqxdsn2ds8wq86a30lm055d7n"; depends=[]; }; + biblionetwork = derive2 { name="biblionetwork"; version="0.1.0"; sha256="0nhx9bk7r5l0bvj98clnmwf53ihghf48zai4nj6pcgr2rb69fvjj"; depends=[data_table Rdpack]; }; bibtex = derive2 { name="bibtex"; version="0.4.2.3"; sha256="0vdwx6808r73pk15263f33bkqbfmb08d8jkmr4d7h4ml414ikbbv"; depends=[stringr]; }; biclique = derive2 { name="biclique"; version="1.0.5"; sha256="1fdf2r1jc2x8yw0fcw7yyjdxz4b870w6y7mr68qixqxwpl6943zq"; depends=[]; }; biclust = derive2 { name="biclust"; version="2.0.2"; sha256="1pk7mvwlg4hkc4cn4w6wr2c192qx03d1xfwlzclk5bw1nmcg483b"; depends=[additivityTests colorspace flexclust ggplot2 lattice MASS tidyr]; }; biclustermd = derive2 { name="biclustermd"; version="0.2.2"; sha256="00d7lhkcr9bj45zwpm78hdp3qllfisx097dsql3g64v9ix2q44g5"; depends=[biclust clusteval doParallel dplyr foreach ggplot2 magrittr nycflights13 phyclust tidyr]; }; bife = derive2 { name="bife"; version="0.7.1"; sha256="0d1hfzji3769nsa5xvlmn7sbn21igwx3aa7vxlcdn1b9ykh7fx76"; depends=[data_table Formula Rcpp RcppArmadillo]; }; + bifurcatingr = derive2 { name="bifurcatingr"; version="1.0.0"; sha256="0msbdr2m4xmvnd00yklk2b8c8qwr11d5gc1x22sqd16fgj9y0qvf"; depends=[igraph MASS]; }; bigGP = derive2 { name="bigGP"; version="0.1-6"; sha256="0fwm06rzx1qbh16ii93x26i4v4yb50jk67k3qmzyr3gr4z9b9xhg"; depends=[Rmpi]; }; bigMap = derive2 { name="bigMap"; version="2.3.1"; sha256="08c9s5sk672j70d6pnva7z52i4s3knkby06lva9al9n8a3jiwsvz"; depends=[BH bigmemory colorspace RColorBrewer Rcpp RcppArmadillo]; }; bigQueryR = derive2 { name="bigQueryR"; version="0.5.0"; sha256="051c8rkj77dm78237dzhf3lcdawv0xv72pwfiim9bi89z9mp6f9m"; depends=[assertthat googleAuthR googleCloudStorageR httr jsonlite]; }; bigReg = derive2 { name="bigReg"; version="0.1.2"; sha256="1hmvh5j40zpzz6c88hmikphps8rb741yvkg60dxmkfl8gxqsrp3w"; depends=[MASS Rcpp RcppArmadillo uuid]; }; bigSurvSGD = derive2 { name="bigSurvSGD"; version="0.0.1"; sha256="08i6hwfr4rpvmxfa0vx8bi2dsa63iasj049ndwfn6zgvai6qaz0s"; depends=[bigmemory doParallel foreach Rcpp survival]; }; biganalytics = derive2 { name="biganalytics"; version="1.1.21"; sha256="19drir6vclzz1ffccvnkxnmiqnwmddiqm7y64pz4j6ifxpc1igfy"; depends=[BH biglm bigmemory foreach Rcpp]; }; - bigassertr = derive2 { name="bigassertr"; version="0.1.3"; sha256="1f0abvsixdkrr8nfm0knby69j0pac4srlg8nlsmrymz6nzcf82d9"; depends=[]; }; + bigassertr = derive2 { name="bigassertr"; version="0.1.4"; sha256="05s0l655d1zx6srd0bgmrdhx02kd3r8glv7m7d0q65h5jn75im8l"; depends=[]; }; bigchess = derive2 { name="bigchess"; version="1.9.1"; sha256="1vdzx185y1agh1xjf7qcfi2s6l7qzm1kx6b2kr3cbz2in88bws3n"; depends=[processx]; }; bigdatadist = derive2 { name="bigdatadist"; version="1.1"; sha256="16gkybwcp9sxqb0iic2fhmc4gndr44ayg14wrfcjvjaj4g5r6xs2"; depends=[FNN MASS pdist rrcov]; }; bigdist = derive2 { name="bigdist"; version="0.1.4"; sha256="1qfnmhyfadmnnagbhdl4jjrb53i1srszf19idp8fy6bczbjq85yi"; depends=[assertthat bigstatsr furrr proxy]; }; - biglasso = derive2 { name="biglasso"; version="1.3-7"; sha256="1s9l8n0a3nv6viyp62k890nhdpfh8jl1ahhsa51x7bx2agdqplhi"; depends=[BH bigmemory Matrix ncvreg Rcpp RcppArmadillo]; }; + biglasso = derive2 { name="biglasso"; version="1.4.1"; sha256="1q3lilqdbra8wm8cs49d9kl044dlsr69mjax1rvhb9jciyfbrbhw"; depends=[BH bigmemory Matrix ncvreg Rcpp RcppArmadillo]; }; bigleaf = derive2 { name="bigleaf"; version="0.7.1"; sha256="0hsssz5973vapkmmh9dgzrijyjj1s75iarq3cpfi7ljm4n748qig"; depends=[robustbase solartime]; }; biglm = derive2 { name="biglm"; version="0.9-2.1"; sha256="0iy9xr2bq42wlizgwlz7w5kh9206yqkw9h2cr6mcsmizgjg3rkvd"; depends=[DBI]; }; biglmm = derive2 { name="biglmm"; version="0.9-2"; sha256="1zj1h2hszps3w913j2dk4cyj5jsqkkxsm3pcjlc4jnq810j100l6"; depends=[DBI]; }; bigmatch = derive2 { name="bigmatch"; version="0.6.2"; sha256="16nmc0n78gzk8x8jhxdilj47gjqqv46sgiivccn5zkv08k1h3jj2"; depends=[liqueueR mvnfast plyr rcbalance]; }; + bigmds = derive2 { name="bigmds"; version="1.0.0"; sha256="0abv8z9c8dqqpcdgrksym4wqmndzzrvcn8h9szzan9imry96j0gg"; depends=[pdist]; }; bigmemory = derive2 { name="bigmemory"; version="4.5.36"; sha256="03pg8mxdc7q0249visjmc8bc3xmwxsfg3i2n6higicj4cfz7zihq"; depends=[BH bigmemory_sri Rcpp]; }; bigmemory_sri = derive2 { name="bigmemory.sri"; version="0.1.3"; sha256="0mg14ilwdkd64q2ri9jdwnk7mp55dqim7xfifrs65sdsv1934h2m"; depends=[]; }; - bigparallelr = derive2 { name="bigparallelr"; version="0.3.0"; sha256="1csgvhy192f709g677m1k94j8nx517xj29g28rlmm7x62fivyzav"; depends=[bigassertr doParallel flock foreach RhpcBLASctl]; }; - bigreadr = derive2 { name="bigreadr"; version="0.2.0"; sha256="0d5fgs16kdsl23jqrgz7in63pwhh7bvj7m8pa8nj11v84ji6lagr"; depends=[bigassertr data_table Rcpp]; }; + bigparallelr = derive2 { name="bigparallelr"; version="0.3.1"; sha256="149nqavxm1cks5qgdhazxnzl27v9g6pn2w1s1bnra2dnshm69i63"; depends=[bigassertr doParallel flock foreach parallelly RhpcBLASctl]; }; + bigreadr = derive2 { name="bigreadr"; version="0.2.4"; sha256="0650mbgbzl2582d02ma3kd8iqdimjajk9gnx70hdjl489q15w80f"; depends=[bigassertr data_table parallelly Rcpp]; }; bigrquery = derive2 { name="bigrquery"; version="1.3.2"; sha256="16whccv7f94vf57dvbbrhdskz3nnbmpa11a14kp7aynckldlfy0v"; depends=[assertthat bit64 curl DBI gargle glue httr jsonlite prettyunits progress rapidjsonr Rcpp rlang tibble]; }; - bigsnpr = derive2 { name="bigsnpr"; version="1.5.2"; sha256="0i0x98vdh9mr5909ax34yfh4ah73s6l8xkbcybq2xbn74k3b78g2"; depends=[bigassertr bigparallelr bigreadr bigsparser bigstatsr bigutilsr data_table foreach ggplot2 magrittr Matrix Rcpp RcppArmadillo rmio vctrs]; }; - bigsparser = derive2 { name="bigsparser"; version="0.4.0"; sha256="1rhgsh95si0na3ndbliqblbb5cmv8hyvp1qig8nzr6b5va22szkf"; depends=[bigassertr Rcpp RcppEigen rmio]; }; + bigsnpr = derive2 { name="bigsnpr"; version="1.6.1"; sha256="1jvj20xnd16h986q6b4nqzshw1i4zcgyybfrxdfl1c9mr7f1q0rw"; depends=[bigassertr bigparallelr bigreadr bigsparser bigstatsr bigutilsr data_table foreach ggplot2 magrittr Matrix Rcpp RcppArmadillo rmio vctrs]; }; + bigsparser = derive2 { name="bigsparser"; version="0.4.4"; sha256="0f1272lh9kvbqwgm02ffx80fgvdwsa5i8qf5ki4mmp247kl3h368"; depends=[bigassertr Rcpp RcppEigen rmio]; }; bigsplines = derive2 { name="bigsplines"; version="1.1-1"; sha256="1kf04p2lglzdi1fdryk27nmj2a2jca2ii7ki8vak93sq21isb179"; depends=[quadprog]; }; - bigstatsr = derive2 { name="bigstatsr"; version="1.3.1"; sha256="0m8yjwyli68b974ibm50n9a0c7wvjy14gjxry8p0v9jcifv7dr3n"; depends=[bigassertr bigparallelr cowplot foreach ggplot2 Rcpp RcppArmadillo rmio RSpectra tibble]; }; + bigstatsr = derive2 { name="bigstatsr"; version="1.5.1"; sha256="0vw7bdbx08k4ny02f90km3snhgzv2hqkskqlc3x68xzw6zd762w0"; depends=[bigassertr bigparallelr cowplot foreach ggplot2 ps Rcpp RcppArmadillo rmio RSpectra tibble]; }; bigstep = derive2 { name="bigstep"; version="1.0.3"; sha256="0ygp1vljqqn5vzpjxlv9d6fxxv3bi2kfyqfs1gf0jgxwb9417b82"; depends=[bigmemory magrittr matrixStats R_utils RcppEigen speedglm]; }; bigtabulate = derive2 { name="bigtabulate"; version="1.1.5"; sha256="1jvp3m0ms2cav9z8vvhh80gsa0kvc351brv2jq99rxv1mwvpa4xj"; depends=[BH biganalytics bigmemory Rcpp]; }; bigtcr = derive2 { name="bigtcr"; version="1.1"; sha256="1l03yc28afdm7glbw4ay0zsywjgqg5l90qz1hfhslsy8gg7d5wq5"; depends=[]; }; bigtime = derive2 { name="bigtime"; version="0.1.0"; sha256="136gy2i4qwa2drklllyzp3z0dbijlavgf3sxy73bf84df2yq1c9i"; depends=[corrplot lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; - bigutilsr = derive2 { name="bigutilsr"; version="0.3.3"; sha256="0wvym0xnglxvh5502mfd5wx855h98drwib7cchgzy87k87mjza2a"; depends=[bigassertr bigparallelr nabor Rcpp robustbase RSpectra]; }; - bikeshare14 = derive2 { name="bikeshare14"; version="0.1.2"; sha256="1sib83driqv9k4aa131nw3xasslrxvnxkn3mr8kxycxccky025n9"; depends=[]; }; + bigutilsr = derive2 { name="bigutilsr"; version="0.3.4"; sha256="096h0v277n39bvipfbfd730lz3qkplfnv58zmzsyy3al9f7lajxl"; depends=[bigassertr bigparallelr nabor Rcpp robustbase RSpectra]; }; + bikeshare14 = derive2 { name="bikeshare14"; version="0.1.4"; sha256="1ca8w4yfw0bfqls0g1qqh8gkyk23d0mi22kavawv9wwhydxrxxjc"; depends=[]; }; bikm1 = derive2 { name="bikm1"; version="1.0.0"; sha256="1pj41d59n3iflwc4iwnwv6g2vhjs9498k85cml7jwb814xpl9jsj"; depends=[ade4 ggplot2 gtools pracma reshape2]; }; bild = derive2 { name="bild"; version="1.2-0"; sha256="0aygx77fn2w249q6ghpxclhm9xb2ngdzrirldr3lpidg6ivc443v"; depends=[]; }; billboard = derive2 { name="billboard"; version="0.1.0"; sha256="1z3y8dijhc1381y91n5zq305xzm1gpvs0g4mdpfr7zrblpa8ws39"; depends=[tibble]; }; - billboarder = derive2 { name="billboarder"; version="0.2.8"; sha256="1n51xildr8h3fqm3yhalgvq6pwlpzbcv230jg7skp8147wmwcmi7"; depends=[ggplot2 htmltools htmlwidgets jsonlite magrittr scales shiny]; }; + billboarder = derive2 { name="billboarder"; version="0.3.1"; sha256="189ngvg84rcwhrivxskmjv3srhadvzr4p1v8pf11axyv2qn01b0x"; depends=[ggplot2 htmltools htmlwidgets jsonlite magrittr rlang scales shiny]; }; bimetallic = derive2 { name="bimetallic"; version="1.0"; sha256="181qi4dr0zc7x6wziq7jdc1his20jmprfpq3hrfm56fr5n1sj8wl"; depends=[]; }; - bimets = derive2 { name="bimets"; version="1.5.1"; sha256="0icjjcb4hslnzv1gn111q4lqaic2dcak35hy73a9svqkrhgw6kgf"; depends=[xts zoo]; }; + bimets = derive2 { name="bimets"; version="1.5.3"; sha256="1m4vzbc5g1f98izz638pxzr67k1sljy8g2qqb6nlwglg7zi7bvak"; depends=[xts zoo]; }; bimixt = derive2 { name="bimixt"; version="1.0"; sha256="0nhszpzjqy8z3vngl5jdzqxzshnn92wgi0ci5n3n5kzi24xkfrzc"; depends=[pROC]; }; binGroup = derive2 { name="binGroup"; version="2.2-1"; sha256="0cb7j6b0s3y56mv1967awwri0kv0rf3sr3vwf9gc2zbjggxi9ffp"; depends=[partitions Rdpack]; }; - binGroup2 = derive2 { name="binGroup2"; version="1.0.2"; sha256="025b087av8zqn7i0ggfdzkkckqql4pc12z4h4r4bw8la2krcdw3z"; depends=[partitions rBeta2009 Rcpp RcppArmadillo Rdpack]; }; + binGroup2 = derive2 { name="binGroup2"; version="1.1.0"; sha256="1hgz1w0bxbd82rx96s6b63wjczsb1x2l6j526wcnwix36kibv3p3"; depends=[ggplot2 partitions rBeta2009 Rcpp RcppArmadillo Rdpack scales]; }; binMto = derive2 { name="binMto"; version="0.0-7"; sha256="0rg9rsdy14jx7zjv60krcz1vh0sxqimsai0wynhx2sx0kydw4ngy"; depends=[mvtnorm]; }; binaryGP = derive2 { name="binaryGP"; version="0.2"; sha256="0i4xi0gxk0lamjdygyx0azdp3kfqmva1g20nl3p65w4yx77m88d6"; depends=[GPfit lhs logitnorm nloptr Rcpp RcppArmadillo]; }; binaryLogic = derive2 { name="binaryLogic"; version="0.3.9"; sha256="19ig9qgjjnivfihjy41pc13qlrb95679mmk4zks5lbbri8qi4qxj"; depends=[]; }; binb = derive2 { name="binb"; version="0.0.6"; sha256="0j9iyawkn1mqvf52q1abp0k00r5239rkvvmvl3cmp4jlffxd4xd7"; depends=[knitr rmarkdown]; }; binda = derive2 { name="binda"; version="1.0.3"; sha256="15rhxnlif7agblzd09gyllkqkf5d8cc75b4vmp7grx8a6y7w47g0"; depends=[entropy]; }; - bindata = derive2 { name="bindata"; version="0.9-19"; sha256="15ya21fz1kvq4qsppkn9ypiqvaq8q4vszdcgcymampa7zc07z2ld"; depends=[e1071 mvtnorm]; }; + bindata = derive2 { name="bindata"; version="0.9-20"; sha256="0smym431w755azsawwsdk6412dfj7bz3bdc3mqzam50xard4s94l"; depends=[e1071 mvtnorm]; }; bindr = derive2 { name="bindr"; version="0.1.1"; sha256="1l05fpk2yql3jka321c0bdgx6mqq9pvfrg2844lbjfpbgjkmqy3w"; depends=[]; }; bindrcpp = derive2 { name="bindrcpp"; version="0.2.2"; sha256="0rz4ibjdjsxl99ff3ha79z7cnjmilx4rx58fk9kk7ld9xc4hf4s8"; depends=[bindr plogr Rcpp]; }; binequality = derive2 { name="binequality"; version="1.0.4"; sha256="19sm4gk7pnp0aq0bil3acm2jc6w26pkj11vvxzysgs1xlmsra7vg"; depends=[gamlss gamlss_cens gamlss_dist ineq survival]; }; @@ -5959,7 +6181,6 @@ in with self; { binomialRF = derive2 { name="binomialRF"; version="0.1.0"; sha256="1liqhnp4j3fxy552fi4yz5vmfzh5blpmxx6fa3g62dgnhcm9sy18"; depends=[data_table randomForest rlist]; }; binomialcftp = derive2 { name="binomialcftp"; version="1.0"; sha256="00c7ymlxk1xnx3x1814x7bcyir7q5sy4rb82dcpzf2bdly4xa1qr"; depends=[]; }; binomlogit = derive2 { name="binomlogit"; version="1.2"; sha256="1njz1g9sciwa8q6h0zd8iw45vg3i1fwcvicj5y8srpk8wqw3qp7k"; depends=[]; }; - binostics = derive2 { name="binostics"; version="0.1.2"; sha256="1izcck2dq8ay9ni1wjg426w5rj39gxwzls1sgnngggapl3pmqzz2"; depends=[]; }; binovisualfields = derive2 { name="binovisualfields"; version="0.1.1"; sha256="0s2p0miqjckkj4v9l0c7zsdnnq69j08p4c5sgdxvkzlv23rnrkyd"; depends=[gtools plotrix shiny]; }; binr = derive2 { name="binr"; version="1.1"; sha256="0kgk91zy7bdrhpkh9c5bi206y9hjwjwzb508i8qqmznqyxmza70r"; depends=[]; }; binsegRcpp = derive2 { name="binsegRcpp"; version="2020.9.3"; sha256="0vkvczm32nx67aw1mw53yc6jlbsk70faa5mvwq6k6bzv3nb2c48a"; depends=[data_table Rcpp]; }; @@ -5973,15 +6194,16 @@ in with self; { bioOED = derive2 { name="bioOED"; version="0.2.1"; sha256="0wx58bngpzlrbbcnx8l1lqhsg51y98wcym1238p87drf64x2mj1n"; depends=[bioinactivation corrplot dplyr FME ggplot2 MEIGOR rlang tidyr tidyselect tidyverse]; }; bioPN = derive2 { name="bioPN"; version="1.2.0"; sha256="0mvqgsfc7d4h6npgg728chyp5jcsf49xhnq8cgjxfzmdayr1fwr8"; depends=[]; }; bioRad = derive2 { name="bioRad"; version="0.5.2"; sha256="1kx1vh6p37170f1crylwyzap0c7s5d82rx7qqi95f8d26niqcjn9"; depends=[assertthat curl data_table fields ggmap ggplot2 lubridate lutz maptools raster rgdal rhdf5 sp tidyr viridis viridisLite]; }; - bioacoustics = derive2 { name="bioacoustics"; version="0.2.4"; sha256="003z6vd19a62mdfzkkpvhfn42c7lws2863nxvfl9hbqcx0zbq7gn"; depends=[htmltools moments Rcpp stringr tuneR]; }; + bioacoustics = derive2 { name="bioacoustics"; version="0.2.5"; sha256="1mnav46ydrig8bx0vnd2h5ak6q6l3i8kzqq2grj0dc6lba0d8kp3"; depends=[htmltools moments Rcpp stringr tuneR]; }; bioassays = derive2 { name="bioassays"; version="1.0.1"; sha256="1y32wxkv14l7r0f35y4hxxxh3zpw2gd4hsjmkajhmzmnvg5jdw78"; depends=[dplyr ggplot2 magrittr nplr reshape2 rlang]; }; biocompute = derive2 { name="biocompute"; version="1.0.4"; sha256="18k8qrc5zy48zmkxxzv7yfsi7z3hpy8fcw7hs61a8fykwl5793ba"; depends=[cli crayon curl digest httr jsonlite jsonvalidate magrittr rmarkdown stringr uuid yaml]; }; biogas = derive2 { name="biogas"; version="1.23.2"; sha256="05g6nyi872skvr34kw5c71ggnnjc3fv95imc327yjqhmqmwx3m19"; depends=[]; }; biogeo = derive2 { name="biogeo"; version="1.0"; sha256="14sqgg8b06gp5dajxvyj9s3ndsk7jpkfr0mkyl2l61kgp6qx53rh"; depends=[maptools raster sp stringr vegan]; }; biogram = derive2 { name="biogram"; version="1.6.3"; sha256="1y7yaa6xwv11b6a4qf4qb3d7rsz0yiiq1k5mb0dbm3avydnl9c4b"; depends=[combinat entropy partitions slam]; }; - biogrowth = derive2 { name="biogrowth"; version="0.1.2"; sha256="1ipk9pvl05f365adqqcvdf7h16z9l9mbb2s0k6sy705714fv5wdb"; depends=[cowplot deSolve dplyr FME ggplot2 lamW MASS purrr rlang tibble tidyr]; }; + biogrowth = derive2 { name="biogrowth"; version="0.2.0"; sha256="0zz5m77wahb1x1psqay9d5gzvx343jqzl8lf5n2043sc7qnk8s3r"; depends=[cowplot deSolve dplyr FME formula_tools ggplot2 lamW MASS purrr rlang tibble tidyr]; }; bioimagetools = derive2 { name="bioimagetools"; version="1.1.5"; sha256="1qscyfm7mx9v9ag3hdyyvn7vwnfvms9dc1qffbyby9fr9rj3gs3q"; depends=[EBImage httr tiff]; }; bioinactivation = derive2 { name="bioinactivation"; version="1.2.3"; sha256="0gz1bbakf6b23jsbvrr8314yxajxcr1akm5srgm883lrf1p5ax13"; depends=[deSolve dplyr FME ggplot2 lazyeval MASS purrr rlang]; }; + biokNN = derive2 { name="biokNN"; version="0.1.0"; sha256="113lynbxmv88ycvbsq9drn2f75md7yajhicfw8qd8l6lawiq1fqc"; depends=[cluster desc dplyr ggplot2 lme4 magrittr mice mitml tidyr]; }; biolink = derive2 { name="biolink"; version="0.1.7"; sha256="1i9aisvb3lvljird89fy9fx7h3s1wi6dpilycbynqyhz8xqnnszj"; depends=[DBI glue memoise rentrez RMySQL xml2]; }; biomartr = derive2 { name="biomartr"; version="0.9.2"; sha256="12bw15hvjg7fbrq1mwn2xgzbplydy8rlq982hs118mlwdrlqb06q"; depends=[biomaRt Biostrings curl data_table downloader dplyr fs httr jsonlite philentropy purrr R_utils RCurl readr stringr tibble XML]; }; biomod2 = derive2 { name="biomod2"; version="3.4.6"; sha256="0nvxg0a78ynydx3wd16vaildw9x4hiagmx4wkrwkzbyhyi2pgza1"; depends=[abind caret checkmate dismo doParallel dplyr earth ENMeval foreach gbm ggplot2 lattice MASS maxnet mda nnet PresenceAbsence pROC purrr randomForest raster rasterVis reshape rlang rpart sp tidyr]; }; @@ -5994,8 +6216,8 @@ in with self; { biospear = derive2 { name="biospear"; version="1.0.2"; sha256="10y4hbncwiqpxzqvzjrmfgp804zczdgvwpjcj0dzaa0sx1njdzja"; depends=[cobs corpcor devtools glmnet grplasso MASS Matrix mboost pkgconfig plsRcox pROC PRROC RCurl survAUC survival]; }; biostat3 = derive2 { name="biostat3"; version="0.1.5"; sha256="1hnq2al27033zagxjd0r8nls6z8lznfqqiyrharq07s6bgbl5bv9"; depends=[car MASS muhaz survival]; }; biotic = derive2 { name="biotic"; version="0.1.2"; sha256="1p18jkdd263dgk90626n9awkj6m4zn1n7897596fzrzrahksa978"; depends=[]; }; - biotools = derive2 { name="biotools"; version="4.0"; sha256="0hbcpyfkx658my6k2fl1z597qmfmby0rkysflbz6g09r2yh8mm1k"; depends=[boot MASS]; }; - bipartite = derive2 { name="bipartite"; version="2.15"; sha256="0gr1wm9bvvrvwv5gzzfic7yknp826ga44vjbil84x1kp0h0k1f46"; depends=[fields igraph MASS permute sna vegan]; }; + biotools = derive2 { name="biotools"; version="4.1"; sha256="1xa5p8y8d524991qr0wjjc4fcl2mb32n5c465mkxfjfm7kbw28vh"; depends=[boot MASS]; }; + bipartite = derive2 { name="bipartite"; version="2.16"; sha256="10flnwgsll86w1dgn4rswbshag8l35hski0nf7xkvp5fj39sy4wp"; depends=[fields igraph MASS permute sna vegan]; }; bipartiteD3 = derive2 { name="bipartiteD3"; version="0.2.0"; sha256="1jvhlycmxii4vcm9qbj246qkwhd1bcggqq56b5rmbyqwd4vhqh8f"; depends=[downloader dplyr purrr r2d3 RColorBrewer stringr tibble tidyr]; }; biplotbootGUI = derive2 { name="biplotbootGUI"; version="1.2"; sha256="07lrs2n6s54h97vjriszszhksdbi14s2i234kwfhg7aq47k6l0jl"; depends=[cluster dendroextras MASS matlib rgl shapes tcltk2 tkrplot]; }; birankr = derive2 { name="birankr"; version="1.0.1"; sha256="1azgrzgw5bnfac8p287ir5zl6kxc6jij20p6cfc3lbbl03f8sa1k"; depends=[data_table Matrix]; }; @@ -6010,57 +6232,59 @@ in with self; { bit64 = derive2 { name="bit64"; version="4.0.5"; sha256="0y0m7q1rwam1g88cjx7zyi07mj5dipxd9jkl90f294syx8k6ipr5"; depends=[bit]; }; bite = derive2 { name="bite"; version="0.3"; sha256="00sph3pdbb9p21s3263ni4by2ivvya1sbjm9wvwx1rwjr4f31jps"; depends=[ape coda MASS phytools sm vioplot xml2]; }; bitmexr = derive2 { name="bitmexr"; version="0.3.1"; sha256="1h4fdh88b8j1p6hxabwf2v1wm8wnqzpl67hh15pjky2hhczfds05"; depends=[attempt curl digest dplyr httr jsonlite lubridate magrittr progress purrr rlang stringr]; }; - bitops = derive2 { name="bitops"; version="1.0-6"; sha256="176nr5wpnkavn5z0yy9f7d47l37ndnn2w3gv854xav8nnybi6wwv"; depends=[]; }; + bitops = derive2 { name="bitops"; version="1.0-7"; sha256="1i0phmq5yynla5x0frqll1gbf5ww59p3sgz1s06a354zqf9grdg9"; depends=[]; }; bitsqueezr = derive2 { name="bitsqueezr"; version="0.1.1"; sha256="0dy180r9cclq46mh0fzc68p5zm9x2z5pa8ajgsk7qycdkyw5v829"; depends=[]; }; biva = derive2 { name="biva"; version="0.1.0"; sha256="1vppvk2n60hhi7p8y8rdyckmh4yk70wqyhbg7rbgh833s66whypw"; depends=[corrgram rpivotTable shiny shinyAce]; }; - bivarRIpower = derive2 { name="bivarRIpower"; version="1.2"; sha256="0vgi0476rwali6k8bkp317jawzq5pf04v75xmycpmadb7drnpzy0"; depends=[]; }; - bivariate = derive2 { name="bivariate"; version="0.6.0"; sha256="0llpgwwcals3r2dvk8bln448avmf5fd50dhrmirq92w7s3zkxmrp"; depends=[barsurf intoo KernSmooth mvtnorm]; }; + bivariate = derive2 { name="bivariate"; version="0.7.0"; sha256="19yjd1c8fi15zcwsh04069drzbqwzmii59nvp2b8m6647sfms444"; depends=[barsurf KernSmooth mvtnorm]; }; bivgeom = derive2 { name="bivgeom"; version="1.0"; sha256="1cn8k7q011whr4f7zig85dsrkz04614z9ns2ky6k6i16s5n3glxy"; depends=[bbmle copula]; }; bivquant = derive2 { name="bivquant"; version="0.1"; sha256="05dn4qik2dvmgqc2613vddh312bqhza1vnf94an75888gxri5h03"; depends=[copula cubature lpSolve MASS mvtnorm regpro]; }; bivrp = derive2 { name="bivrp"; version="1.2-2"; sha256="0b38nh38vgqjllb1z9627dm86yp0s06ky1g829g8kkz7rffdp2za"; depends=[MASS]; }; biwavelet = derive2 { name="biwavelet"; version="0.20.19"; sha256="0pdjjjjiwnl7ihlwzjd9hwl5kzq5wbnbqfmm5pp8gvkcypj9k7rb"; depends=[fields foreach Rcpp]; }; biwt = derive2 { name="biwt"; version="1.0"; sha256="1mb3x8ky3x8j4n8d859i7byyjyfzq035i674b2dmdca6mn7paa14"; depends=[MASS rrcov]; }; - bizdays = derive2 { name="bizdays"; version="1.0.6"; sha256="1av96rj4fllfais9xwh1p8601xvsj0awfh9n2n1x5kzca966h8fq"; depends=[jsonlite]; }; + bizdays = derive2 { name="bizdays"; version="1.0.8"; sha256="1aiwnhgd2h7j36xj7165fc1fnvl8qn4y8c1lbdlsbanmvayydmr5"; depends=[jsonlite]; }; bjscrapeR = derive2 { name="bjscrapeR"; version="0.1.0"; sha256="18chbgiwify272iqf0w4vsqh73wbk12d8m2awc5hbnfqblz3phwd"; depends=[dplyr glue readr tibble]; }; bkmr = derive2 { name="bkmr"; version="0.2.0"; sha256="0dk6dn73bqlvwinn3aginls4533931xcr3h59k0w60yxs3v8yakv"; depends=[dplyr fields magrittr MASS nlme tidyr tmvtnorm truncnorm]; }; - bkmrhat = derive2 { name="bkmrhat"; version="1.0.0"; sha256="170lj3287phywmn85qd18sy5kzxnrk2qqp1k8y2df13610d1m1gh"; depends=[bkmr coda future rstan]; }; + bkmrhat = derive2 { name="bkmrhat"; version="1.0.2"; sha256="1mc4bjz0aczq2w4rxk59izrf6vnw92fjp9fsh00fgnliysv78sly"; depends=[bkmr coda future rstan]; }; blackbox = derive2 { name="blackbox"; version="1.1.32"; sha256="180y19ls0vdk98smhs9hxpcwg3hwpl62d19zdiml38bjlxmr0kav"; depends=[foreach geometry lattice MASS nloptr numDeriv pbapply proxy rcdd Rcpp RcppEigen spaMM]; }; blaise = derive2 { name="blaise"; version="1.3.4"; sha256="14jk62sw4xs0yip8gh1w2795l8p0ybv83c24ijizxymg16h7i9g7"; depends=[dplyr readr stringr tibble]; }; blandr = derive2 { name="blandr"; version="0.5.1"; sha256="1rqas71hlf000b3z824d8ljshf8bx91bbrzaxxnx5n3chv19w6z6"; depends=[ggplot2 jmvcore knitr R6 rmarkdown stringr]; }; blapsr = derive2 { name="blapsr"; version="0.5.5"; sha256="1h6bdlawb3wzfw0l62k8b440yvvdh2liylhlnf3jfhdh1fivxq95"; depends=[coda MASS Matrix RSpectra sn survival]; }; + blaster = derive2 { name="blaster"; version="1.0.3"; sha256="0ch03j5z1zlfs3jmp7p4pwhava89k9irixr1p3dx45090q05j3a1"; depends=[Rcpp]; }; blastula = derive2 { name="blastula"; version="0.3.2"; sha256="084mk6xb8ivqrp8anvisfk8rvwi7qfrp5kmy66vpihmjmqh7dkyc"; depends=[base64enc commonmark curl digest dplyr fs getPass here htmltools httr jsonlite magrittr mime rlang rmarkdown stringr uuid]; }; blatent = derive2 { name="blatent"; version="0.1.1"; sha256="1jnf3i7s3mn99ff8yzygxys0w8qf6vrfk16iqgxh7jbivbrczysk"; depends=[coda Matrix mnormt R6 Rcpp RcppArmadillo truncnorm]; }; - blavaan = derive2 { name="blavaan"; version="0.3-12"; sha256="01npki6jx19rzli193r57i8i495bqpnifcawqv8cxp718c9s4i4s"; depends=[bayesplot BH coda future_apply lavaan loo MCMCpack mnormt nonnest2 Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; + blavaan = derive2 { name="blavaan"; version="0.3-15"; sha256="0vxy7rbs75yn5yz0g72pxca8j5a5i12xap2y1kdmpdn39c1asgpp"; depends=[bayesplot BH coda future_apply lavaan loo Matrix MCMCpack mnormt nonnest2 Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; blendedLink = derive2 { name="blendedLink"; version="1.0"; sha256="19d1pnjag89jjvkl5a6wx531qjqp4cv5jk95md6jby27yr52r8vp"; depends=[]; }; blender = derive2 { name="blender"; version="0.1.2"; sha256="1qqkfgf7fzwcz88a43cqr8bw86qda33f18dg3rv1k77gpjqr999c"; depends=[vegan]; }; blin = derive2 { name="blin"; version="0.0.1"; sha256="1h94azm7gli9i4v3li5c1p36p3rkcj2p5j6rqzlzf0pcqs0bsc09"; depends=[abind glmnet MASS Matrix mvtnorm]; }; blindrecalc = derive2 { name="blindrecalc"; version="0.1.2"; sha256="0nph82l58kgq2dqvga262zh394zp1had85qb8k8rwgaq68lad2vy"; depends=[Rcpp]; }; blink = derive2 { name="blink"; version="1.1.0"; sha256="053nw592sglzh6fgz7hj8ra6q7lqs83hhv14kcgs67b56q8a3crb"; depends=[plyr stringdist]; }; blm = derive2 { name="blm"; version="2013.2.4.4"; sha256="1w6c30cq38j4i1q4hjg12l70mhy5viw886l1lsnxyvniy113in4i"; depends=[]; }; - blme = derive2 { name="blme"; version="1.0-4"; sha256="1ca2b0248k0fj3lczn9shfjplz1sl4ay4v6djldizp2ch2vwdgy2"; depends=[lme4]; }; + blme = derive2 { name="blme"; version="1.0-5"; sha256="0413j7gwr5yj14jamkizj55q7xii1a0kgazzj0ilqn2ascclz6k7"; depends=[lme4]; }; blmeco = derive2 { name="blmeco"; version="1.4"; sha256="1370djpy87816bfr0g8730x7q4d4xx9aa41iqm622q5b5zm2jzmp"; depends=[arm lme4 MASS]; }; blob = derive2 { name="blob"; version="1.2.1"; sha256="1slb5mvxfyi92i8ifx2qa31hp57inilwhq1g9lzvgha6jrxbqm7g"; depends=[rlang vctrs]; }; blockCV = derive2 { name="blockCV"; version="2.1.1"; sha256="0431d38zzkbpri65p5vnr8wc5b27124c4jaj845rgjlkvvb0xysm"; depends=[progress raster sf]; }; blockForest = derive2 { name="blockForest"; version="0.2.4"; sha256="14xggdm34hmdlz3hvvp5layk6mb016yppqf9x9rbia9lmmjbhgfh"; depends=[Matrix Rcpp RcppEigen survival]; }; blockRAR = derive2 { name="blockRAR"; version="1.0.2"; sha256="1d9izlcgz85kcz1sh11mcxq96qh0cwv6638jha851h2f4lnc8aa4"; depends=[arm dplyr ldbounds magrittr tibble]; }; blockTools = derive2 { name="blockTools"; version="0.6-3"; sha256="0023p0msfmp8swq4f5aff40m976np7y051x8hjizzw91hrfa4w2n"; depends=[MASS tibble]; }; - blockcluster = derive2 { name="blockcluster"; version="4.4.3"; sha256="0al1v4r26rh4fx4g8gyk8mxfagn75xb9n4lwh3s6xvk87x33p20c"; depends=[Rcpp rtkore]; }; + blocklength = derive2 { name="blocklength"; version="0.1.3"; sha256="0443b30fisyjb3syfi7d7d3q3jxr3wig6rp6s0fbhpzlpjb60jh2"; depends=[tseries]; }; blockmatrix = derive2 { name="blockmatrix"; version="1.0"; sha256="14k69ly4i8pb8z59005kaf5rpv611kk1mk96q6piyn1gz1s6sk6r"; depends=[]; }; blockmodeling = derive2 { name="blockmodeling"; version="1.0.0"; sha256="1z4w2kq0id0gb5d0lqcdaw3clplhzywarkpvvx3drivdypzl237i"; depends=[Matrix]; }; blockmodels = derive2 { name="blockmodels"; version="1.1.4"; sha256="1kx6ryx0ma7j70nzby0wdagqkf1cjdhvw32rf7i1pp8f2rkfsg84"; depends=[digest Rcpp RcppArmadillo]; }; blockrand = derive2 { name="blockrand"; version="1.5"; sha256="0bic3b8l7mp2hpwd8k1diwy6a4lj92i7s5k20i2wy8kw0c74jwfh"; depends=[]; }; - blocksdesign = derive2 { name="blocksdesign"; version="4.6"; sha256="1pgnp3ns8xv1991irxj8apvrnr3d2knbiansfcjiiykvvcpzgm3w"; depends=[plyr PolynomF]; }; - blogdown = derive2 { name="blogdown"; version="0.21"; sha256="0kbzyr1f9pvh4f3pydjhi9gdczbah9h0xpmic90cnadv8flasvd8"; depends=[bookdown htmltools httpuv knitr later rmarkdown servr xfun yaml]; }; + blocksdesign = derive2 { name="blocksdesign"; version="4.9"; sha256="1kr3fxs8vgc96clhx5ml11jkwll1rg9gf16xg93q14jpg4hg0j9h"; depends=[plyr PolynomF]; }; + blogdown = derive2 { name="blogdown"; version="1.3"; sha256="11xjxa0jw93p0wbc41ckb0rkr2z8j5gcb6hz1gz5lq48vqfwsrrc"; depends=[bookdown htmltools httpuv knitr later rmarkdown servr xfun yaml]; }; blorr = derive2 { name="blorr"; version="0.3.0"; sha256="1ynvg6ar7c7p01225q9czy4gxks0p1vw3sx207l7vzqxw20wb1bn"; depends=[car data_table ggplot2 gridExtra lest Rcpp]; }; blrm = derive2 { name="blrm"; version="1.0-1"; sha256="0p0nmbxil4l89fcryrgsg9mxzb5fyg93p50aqkjy00ms05hwd0hx"; depends=[boot mvtnorm openxlsx reshape2 rjags]; }; blsAPI = derive2 { name="blsAPI"; version="0.2.1"; sha256="0p45g4qqaialh5m9bxgrvnc7nqmm0429syw0bml8h4h8vy4014a7"; depends=[httr rjson]; }; blscrapeR = derive2 { name="blscrapeR"; version="3.2.0"; sha256="0dq9yg9xik715b36vc3fch4ab3njqa22w7b7b905b9gyagkv2zbv"; depends=[dplyr ggplot2 httr jsonlite magrittr purrr stringr tibble]; }; bltm = derive2 { name="bltm"; version="0.1.0"; sha256="1sx4ii65ddvdw45za8j320v1s9d1pz5k2gx979yymhyxi8fmq69z"; depends=[mvnfast Rfast]; }; + bmabasket = derive2 { name="bmabasket"; version="0.1.1"; sha256="1hgbl1x38snhzbh5j1qz81azkdwzmm4idacyyyrn895vl71ypfrn"; depends=[partitions Rcpp RcppArmadillo]; }; bmass = derive2 { name="bmass"; version="1.0.3"; sha256="0dafixd996lamn5kfbqpiawblalhyw1gi394j46n2sij2r209d76"; depends=[]; }; bmd = derive2 { name="bmd"; version="0.5"; sha256="0d4wxyymycb416sdn272292l70s1h2m5kv568vakx3rbvb8y6agy"; depends=[drc]; }; bmem = derive2 { name="bmem"; version="1.8"; sha256="1nhybz8aarzlqjx4443hsflflgy2jcprz5dv6mwxacnyspm93vlq"; depends=[Amelia lavaan MASS sem snowfall]; }; bmeta = derive2 { name="bmeta"; version="0.1.2"; sha256="19pm60xpmlanngq4nbibp0n5m98xw24b2xghz92ly31i3mkg2n68"; depends=[forestplot R2jags]; }; bmgarch = derive2 { name="bmgarch"; version="1.0.0"; sha256="1zivja09ci6kj5nymwhdzjjjqvkvbxcjk9v27kk7w25sqbyv9gvk"; depends=[BH forecast ggplot2 loo MASS Rcpp RcppEigen Rdpack rstan rstantools StanHeaders]; }; + bmggum = derive2 { name="bmggum"; version="0.1.0"; sha256="1r0j5gklmknyan68nc3vfn96ck414v75547486ic70v2pdr3xnpf"; depends=[BH edstan ggplot2 GGUM loo Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; bmixture = derive2 { name="bmixture"; version="1.6"; sha256="12csg1nafhwhqrhg5rrzjsw06fbvgd8447a9ypbgs78ah81rmr8f"; depends=[BDgraph]; }; bmk = derive2 { name="bmk"; version="1.0"; sha256="1wxkrlrhmsxsiraj8nyiax9bqs834ln2swykmpf40wxspkykgfdq"; depends=[coda functional plyr]; }; bmlm = derive2 { name="bmlm"; version="1.3.11"; sha256="1nlwfrs6kk2jxq8vxwfj388cdf2p8h81lskkb9bp80fp8fx722qh"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; @@ -6071,35 +6295,33 @@ in with self; { bmscstan = derive2 { name="bmscstan"; version="1.1.0"; sha256="1mr56ry9jzsd2z0zffcysy01bh62cg13hi4swdhdvwmjcsb5gq97"; depends=[bayesplot coda ggplot2 LaplacesDemon logspline rstan]; }; bnclassify = derive2 { name="bnclassify"; version="0.4.5"; sha256="1ik3n0g6gw7504ryg5skwygyc545150r297gii4mr2zj252lf069"; depends=[assertthat BH entropy matrixStats Rcpp rpart]; }; bnlearn = derive2 { name="bnlearn"; version="4.6.1"; sha256="1bxf1p10g40nci92m1nkw9xska45hm29q1vp8wzfac1kmxjl8m74"; depends=[]; }; - bnma = derive2 { name="bnma"; version="1.3.0"; sha256="1bq25kbll6g5lay3b86kif7i719khn597yfycz7zzayypk4ckiwv"; depends=[coda ggplot2 igraph rjags]; }; + bnma = derive2 { name="bnma"; version="1.4.0"; sha256="0wfz5faxgbci0n6kmgcazn0vjnsvn9l7lj4f63a3c0x6pb0yiir0"; depends=[coda ggplot2 igraph rjags]; }; + bnmonitor = derive2 { name="bnmonitor"; version="0.1.0"; sha256="0fi6fkbvb2b9mpnsviib9mv7vymbds2kqb2s5805ycwxap233s31"; depends=[bnlearn DiagrammeR dplyr ggplot2 gRain gRbase gridExtra matrixcalc purrr RColorBrewer reshape2 rlang tidyr]; }; bnnSurvival = derive2 { name="bnnSurvival"; version="0.1.5"; sha256="1d9jmfx0id4lmw122zga7hb52vlfdfqn4amhzpsmhyck99rv92j4"; depends=[pec prodlim Rcpp]; }; bnormnlr = derive2 { name="bnormnlr"; version="1.0"; sha256="0l2r7vqikak47nr6spdzgjzhvmkr9dc61lfnxybmajvcyy6ymqs9"; depends=[mvtnorm numDeriv]; }; bnpa = derive2 { name="bnpa"; version="0.3.0"; sha256="0qsxk47i7q4d8hbs2xj5k5sf8bqyzhq7rbj4y7w8ljprznlydgl9"; depends=[bnlearn fastDummies lavaan Rgraphviz semPlot xlsx]; }; bnpmr = derive2 { name="bnpmr"; version="1.2"; sha256="0vpqhs1h2mphn9w5yngb7lxvmzrhn7mkj7ca6hykhhg48s2ra98g"; depends=[]; }; - bnpsd = derive2 { name="bnpsd"; version="1.2.1"; sha256="1jnv0pnq5fd5pyy1rx4cbrxl715ss2ci3p9k6zwz5s9x1kxhvgd9"; depends=[]; }; + bnpsd = derive2 { name="bnpsd"; version="1.2.3"; sha256="1r2y1ch1ly4f6amdb5x8gywzv6pglrvzb7h20shx6x8k7qw03fgp"; depends=[]; }; bnspatial = derive2 { name="bnspatial"; version="1.1.1"; sha256="1drm9ia4lr80wahbbn9xrw658ppmgxm4iadwv77jz1x786dda2n1"; depends=[doParallel foreach gRain gRbase raster rgdal sf]; }; - bnstruct = derive2 { name="bnstruct"; version="1.0.8"; sha256="1a4x235mji9hkw3gp4br6yj351x0rdxi5nhyrqihna35y4a9429g"; depends=[bitops igraph Matrix]; }; + bnstruct = derive2 { name="bnstruct"; version="1.0.9"; sha256="13nzka8i0znkyi9bkwlm8k5ksff1fc2i0aqbczxix23i1qzl8jz0"; depends=[bitops igraph Matrix]; }; bnviewer = derive2 { name="bnviewer"; version="0.1.6"; sha256="036jmypxg2ciiz388f90vm73l9djhpi6gzp1ibn9l0x3d072r7zz"; depends=[assertthat bnlearn caret e1071 igraph shiny visNetwork]; }; boa = derive2 { name="boa"; version="1.1.8-2"; sha256="04lhqk5qfvaz1jk90glr2yi5vq7cdy0w8m6g2lnzk359l9y41zhp"; depends=[]; }; - bodenmiller = derive2 { name="bodenmiller"; version="0.1"; sha256="0gqrjscgq4qgk7yl32w0965yscc1py9klr49s8q8hkzyihlwzim2"; depends=[]; }; + bodenmiller = derive2 { name="bodenmiller"; version="0.1.1"; sha256="0rdbk3f95iw4352fl9d81ir503q072chbb4hn1k12sp1wjc3apid"; depends=[]; }; boilerpipeR = derive2 { name="boilerpipeR"; version="1.3"; sha256="0467bjqhdmi3p02fp0r7rgm00x9ry464f2hniav990qzsw8i16q6"; depends=[rJava]; }; bold = derive2 { name="bold"; version="1.1.0"; sha256="06qxkmfzgq7427js13bddxq9iydq0dpa13wyzrbycl6xg83sha0z"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; }; - bomrang = derive2 { name="bomrang"; version="0.7.3"; sha256="1if68q5jsmpyyqgvr9954gkwby8ddyl27wdda9510k6w91h893r9"; depends=[crayon curl data_table dplyr foreign hoardr httr janitor jsonlite lubridate magick magrittr readr rvest terra tidyr xml2]; }; - bookdown = derive2 { name="bookdown"; version="0.21"; sha256="0xms1srx9l2mn8xaxnpic0s21y8k56bhwpj45wy7b0yscmxgmh27"; depends=[htmltools knitr rmarkdown tinytex xfun yaml]; }; + bookdown = derive2 { name="bookdown"; version="0.22"; sha256="0j80wm36mw3f14ncfwm6xx09wff1kswfiv8b309x9y0f9r46dr0z"; depends=[htmltools knitr rmarkdown tinytex xfun yaml]; }; bookdownplus = derive2 { name="bookdownplus"; version="1.5.8"; sha256="1cdxz5c69cgdk7wxr0xwhzw361rpg7j8xjv9hjf1877qqmhxbrkd"; depends=[bookdown knitr magick xaringan]; }; boostmtree = derive2 { name="boostmtree"; version="1.5.0"; sha256="18w5h8m6g4aszffyn0ixhzn2bgbrwrrcq2k54b70vbw00xqxmg1q"; depends=[nlme randomForestSRC]; }; boostr = derive2 { name="boostr"; version="1.0.0"; sha256="123ag8m042i1dhd4i5pqayqxbkfdj4z0kq2fyhxfy92a7550gib2"; depends=[foreach iterators stringr]; }; - boot = derive2 { name="boot"; version="1.3-25"; sha256="1gpvi1h3nqhnnsfy96rlhakdpj84iqqsxr29rr3261sknky3aj26"; depends=[]; }; - boot_heterogeneity = derive2 { name="boot.heterogeneity"; version="0.1.1"; sha256="124wya02l39rk61sqg5a69s0ly5ih5lsy4rkpslffvs43byjvkwn"; depends=[metafor pbmcapply]; }; + boot = derive2 { name="boot"; version="1.3-28"; sha256="0cjafhqv1c1mrjjcasqr767vs96wjcc6am9r1icryr8l4zymhwcz"; depends=[]; }; + boot_heterogeneity = derive2 { name="boot.heterogeneity"; version="1.1.2"; sha256="0511vc6kbx3mijgknyzdc3jv2i1ay6wsc7660hd07xmvahqg8130"; depends=[HSAUR3 knitr metafor pbmcapply rmarkdown]; }; bootComb = derive2 { name="bootComb"; version="1.0.1"; sha256="1y1kszf5hhacyvkrr9x9b0pjqs4rrzkwy9p30di0vwky5fn0zpp9"; depends=[]; }; bootES = derive2 { name="bootES"; version="1.2"; sha256="0hcaw1v80zspdsy4wr464lmgq33807i2f6n2dc3r7qqwa80g4zz0"; depends=[boot]; }; - bootImpute = derive2 { name="bootImpute"; version="1.1.0"; sha256="1dkm0l397jp23lcj4pbl03c2pjj027zjy08jq7qyr9s1bjmxrbnq"; depends=[mice smcfcs]; }; + bootImpute = derive2 { name="bootImpute"; version="1.2.0"; sha256="04i81dqxygl3hv55kn8nkrqzhqsxw2lpdmdfh8inf8rjcpql5bgw"; depends=[mice smcfcs]; }; bootLR = derive2 { name="bootLR"; version="1.0.2"; sha256="1aj5l42d5y7czxzlg6r9ykdxyjf8m8bahl41xk4k6xpxckdnka14"; depends=[binom boot]; }; - bootRes = derive2 { name="bootRes"; version="1.2.4"; sha256="1lzj154qqqxqg6q2bjnzba8hlcx473i9cpp8kkjkpy7k87fgpm7v"; depends=[]; }; - bootSVD = derive2 { name="bootSVD"; version="0.5"; sha256="14xwbrpqj3j1xpsppgjxpn9ggsns2n1kmni9vn30vgy68zwvs2wy"; depends=[ff]; }; + bootSVD = derive2 { name="bootSVD"; version="1.1"; sha256="16d3qv8vzhfvl9vbfglkb3csmc4npb29jcq9apv89hj7bkcapvi9"; depends=[ff]; }; bootStepAIC = derive2 { name="bootStepAIC"; version="1.2-0"; sha256="0p6v4zjsaj1p6c678010fazdh40lpv0rvhczd1halj8aic98avdx"; depends=[MASS]; }; bootUR = derive2 { name="bootUR"; version="0.2.0"; sha256="01hlglks2lwp49g481hyrz645grf0zhpl508vbhbsvk1z2888cs5"; depends=[Rcpp RcppArmadillo RcppProgress]; }; - bootcluster = derive2 { name="bootcluster"; version="0.2.0"; sha256="0vvymj415i3bz9gc8q6jdbnmzrsq753h2jchvbsb7p5hhz3k777i"; depends=[cluster doParallel dplyr flexclust foreach fpc GGally ggplot2 gridExtra igraph intergraph mclust network plyr sets]; }; bootnet = derive2 { name="bootnet"; version="1.4.3"; sha256="0zmv6wibqkdhffs937xa1xjz6xn6wb4hajpdl36sfkmw3cqfc9sm"; depends=[abind BDgraph corpcor dplyr ggplot2 glasso graphicalVAR gtools huge igraph IsingFit IsingSampler lavaan Matrix mgm mvtnorm NetworkToolbox networktools pbapply psychTools qgraph relaimpo tidyr]; }; bootruin = derive2 { name="bootruin"; version="1.2-4"; sha256="1gbvh99snchipf13kjhymcx60s2kni23y7lv8lhzd3d402grp68h"; depends=[]; }; bootsPLS = derive2 { name="bootsPLS"; version="1.1.2"; sha256="19ikz3l0qds25hgcxvhsvqy6jyshcdvnxw6774ifl9ylngxvlfh0"; depends=[mixOmics]; }; @@ -6108,27 +6330,31 @@ in with self; { bootstrapFP = derive2 { name="bootstrapFP"; version="0.4.4"; sha256="1j9ag18s2n7cihs5hbjhibx8gikxf8fs5hx2ljfzcn0gv492qm02"; depends=[sampling]; }; boottol = derive2 { name="boottol"; version="2.0"; sha256="01dps9rifzrlfm4lvi7w99phfi87b7khx940kpsr4m9s168a2dzv"; depends=[boot plyr]; }; bor = derive2 { name="bor"; version="0.1.0"; sha256="1r5jacmin0cq9zipxa9nmp3jnh6wsddd4wnzw2n5sggnf24ryp8g"; depends=[]; }; - boral = derive2 { name="boral"; version="1.9"; sha256="05s1bjfz8j17qqi1kszahw4yzczc18g71s44n7i7851kwy1xkcv4"; depends=[abind coda corpcor fishMod lifecycle MASS mvtnorm R2jags reshape2]; }; + boral = derive2 { name="boral"; version="2.0"; sha256="1i8lcibmd580xv92ci2xwj0jn290zlh7dv6h5n8cqaky4gqb8iz2"; depends=[abind coda corpcor fishMod lifecycle MASS mvtnorm R2jags reshape2]; }; borrowr = derive2 { name="borrowr"; version="0.2.0"; sha256="0hq9rplb22dm8nikapxnvzq10y4xzi1y7k61ghw9x1fq4fdfyy2f"; depends=[BART mvtnorm Rcpp]; }; botor = derive2 { name="botor"; version="0.3.0"; sha256="1izhpc491f54p3hz32kcp2b2yxkg59ni1caglyllg22bckw228sg"; depends=[checkmate logger reticulate]; }; boundingbox = derive2 { name="boundingbox"; version="1.0.1"; sha256="0kgpsvnq8f0qyw55rldwqapys36y6lb4w2bw2azfl4nmrrnayxbc"; depends=[gplots imager]; }; boussinesq = derive2 { name="boussinesq"; version="1.0.3"; sha256="1j1jarc3j5rby1wvj1raj779c1ka5w68z7v3q8xhzjcaccrjhzxk"; depends=[]; }; boutliers = derive2 { name="boutliers"; version="1.1-1"; sha256="01dp1w5lxmn6nixajg6dz0qincm0i1in03q7g284v37qnszyimqs"; depends=[metafor]; }; + box = derive2 { name="box"; version="1.0.2"; sha256="1paviqdbn39cy03b99lga0krnrdmm3z1s1s1jf8kqxnxsvixmgg1"; depends=[]; }; boxcoxmix = derive2 { name="boxcoxmix"; version="0.28"; sha256="12f1lakfy9i1rq70cq0bffpdachsm58rcmbbhgnq1r31g028zrcc"; depends=[npmlreg qicharts statmod]; }; boxplotdbl = derive2 { name="boxplotdbl"; version="1.3.0"; sha256="1y1b45q69sxbszd83s8ch10z4i55h34ixm8q7yxr7byx3px8y65n"; depends=[]; }; - boxr = derive2 { name="boxr"; version="0.3.5"; sha256="1mhw3val08l03y7c52kq6ln2l5gjn6x1mxg0hx7nr8b86skbrka4"; depends=[assertthat bit64 digest dplyr fs glue httpuv httr mime rio rlang stringr]; }; - bpDir = derive2 { name="bpDir"; version="0.1.1"; sha256="1ia48ygnncv7msisrgqkbzbs8ld2d3lnmwpjr8myzzx4sbdafdk1"; depends=[circular MASS plotrix]; }; + boxr = derive2 { name="boxr"; version="0.3.6"; sha256="1hdm4p7zx2r566zaiyw06qg3c790gsvylrvav7g9fl4i1x6qgkyk"; depends=[assertthat bit64 digest dplyr fs glue httpuv httr jsonlite lifecycle magrittr mime purrr rio rlang stringr tibble]; }; + bp = derive2 { name="bp"; version="1.0.1"; sha256="0x6lcg08rvs7n74v8k920yx0ii4k64qj4ijljjyd0k3rwmi0kcqz"; depends=[cowplot dplyr ggplot2 gridExtra gtable lubridate magrittr tibble tidyselect]; }; + bpDir = derive2 { name="bpDir"; version="0.1.2"; sha256="1wkj25srsbidpcvgm6c74584ahybjy39r86dxir1vd13kbi8l120"; depends=[circular MASS plotrix]; }; bpa = derive2 { name="bpa"; version="0.1.1"; sha256="0np7q1nasrq4j7ssaipvbjgrsi9n612p9lp96frq1dgix95mcgf0"; depends=[magrittr plyr]; }; bpbounds = derive2 { name="bpbounds"; version="0.1.4"; sha256="05knl0lmhbc399zwb35r8m1w5jvmwad8rg5m7m633pg7cfijayb9"; depends=[]; }; - bpca = derive2 { name="bpca"; version="1.3-2"; sha256="0q3rx1wsa9y6c19kh77mvhkdb7qqywc031w6fl3sf0m0jj7skqab"; depends=[rgl scatterplot3d xtable]; }; + bpca = derive2 { name="bpca"; version="1.3-4"; sha256="1b0qigynj35sr5nf9y6hvcr52ydskqwx5wxwb27zawps3iykyjwf"; depends=[rgl scatterplot3d xtable]; }; bpcp = derive2 { name="bpcp"; version="1.4"; sha256="0jwz9vrz6ivz70qzgvpvksk94rw5m7vi6yijbg8dj6biq5rq01lv"; depends=[ggplot2 survival]; }; bpcs = derive2 { name="bpcs"; version="1.0.0"; sha256="0jsy2l1qnzr8098614d6pj7rydf6b9s7kxrkahyzq82ivby9hj5m"; depends=[badger BH coda dplyr ggplot2 gtools HDInterval knitr loo magrittr Rcpp RcppEigen RcppParallel rlang rstan rstantools shinystan StanHeaders stringr tibble tidyr tidyselect]; }; bpgmm = derive2 { name="bpgmm"; version="1.0.7"; sha256="0abh6jjglims8hjm2fwh0dz2qsgxy0fglxl5fnfgkwc139rsrhgy"; depends=[fabMix gtools label_switching MASS mclust mcmcse mvtnorm pgmm Rcpp RcppArmadillo]; }; - bpnreg = derive2 { name="bpnreg"; version="1.0.3"; sha256="0s1whwi12fs77lycngrm0394cp6cy3g1pikhf670n94y21pk2bvi"; depends=[BH haven MASS Rcpp RcppArmadillo]; }; - bpp = derive2 { name="bpp"; version="1.0.0"; sha256="11fgn92vvl7kklv0xdisf8gnf2rbhq11qyckqsxvc5wa821lmnkm"; depends=[mvtnorm]; }; - bqror = derive2 { name="bqror"; version="0.1.3"; sha256="04hxpg12a8iksvm5vahlps1dmirrbzv5rs51s34gqgqf9z072yjl"; depends=[GIGrvg invgamma MASS NPflow pracma truncnorm]; }; + bpnreg = derive2 { name="bpnreg"; version="2.0.1"; sha256="133wxh5ai9mhds9jp1a6f13cq5132myj148rzg0wnh86xwhh38i9"; depends=[BH haven Rcpp RcppArmadillo]; }; + bpp = derive2 { name="bpp"; version="1.0.1"; sha256="0yvkw6hrgjln6q1kn4w271dwwb0vw78pf0gsqq2rdy4nxkxr9hxs"; depends=[mvtnorm]; }; + bqror = derive2 { name="bqror"; version="0.1.4"; sha256="1vk6rahrlvi13bjx7bbvs9lj0a2jykdail41ajr6p2s9agmmw69x"; depends=[GIGrvg invgamma MASS NPflow pracma truncnorm]; }; bqtl = derive2 { name="bqtl"; version="1.0-32"; sha256="0jjqgsm9fmvz5nkgz608xfljjpmaf4rs4f7kxvpqn4b1l9s5lhci"; depends=[]; }; bracer = derive2 { name="bracer"; version="1.1.1"; sha256="1l722jg88i4898v8fwb9klwl9mbpaz1phypbpqc1j2kp2n2vq0vb"; depends=[stringr]; }; + braggR = derive2 { name="braggR"; version="0.1.0"; sha256="0nw6qygmzvfq64a2k2m88wycfvk6414gjy1nx3hg2i1pg7ccv5ch"; depends=[Rcpp]; }; + braidReports = derive2 { name="braidReports"; version="0.5.4"; sha256="1455pswcbz3zscvk6rgvgrjcp154l5lfx5m7s24m91rpjmc2y7pk"; depends=[braidrm ggplot2]; }; braidrm = derive2 { name="braidrm"; version="0.71"; sha256="1cn0rdlw775pmzbjmhny7gkm901a3qgz7infqb5s9az606xg54d3"; depends=[]; }; brainGraph = derive2 { name="brainGraph"; version="3.0.0"; sha256="0sr2rf5fs02m3c304wbya2rszxcivc3cypg978hwzzcf30r4fy7y"; depends=[abind data_table doParallel foreach igraph lattice MASS Matrix permute]; }; brainKCCA = derive2 { name="brainKCCA"; version="0.1.0"; sha256="1ag3qahlba4h4126873hg2bbi6sr729mhiw22gjgr4g4jg6lhh09"; depends=[brainR CCA elasticnet kernlab knitr misc3d oro_nifti rgl]; }; @@ -6137,77 +6363,81 @@ in with self; { brant = derive2 { name="brant"; version="0.3-0"; sha256="0rcp0am4wjlkinvmv0n5bky84v31ds28v163p5mlp343cgma2b62"; depends=[MASS Matrix]; }; bravo = derive2 { name="bravo"; version="1.0.3"; sha256="1q5xgxyjss12jpd0arlqk4va3arzvla597vg2v6f9jbqm07ffy7h"; depends=[Matrix Rcpp]; }; brea = derive2 { name="brea"; version="0.2.0"; sha256="0mb043fdhxrg9gyf4g55ydjx37j20394nvd4d0fmiym98lccyi04"; depends=[]; }; - breakDown = derive2 { name="breakDown"; version="0.2.0"; sha256="1ywa7122id4infcb31rbazdd2w2hm0ff8p0a7insy3lvq0xmqd44"; depends=[ggplot2]; }; + breakDown = derive2 { name="breakDown"; version="0.2.1"; sha256="1jm9zmyfcnr9mjz7b30k34h47msvik9ngfysi6dc48gvrk41yk9q"; depends=[ggplot2]; }; breakage = derive2 { name="breakage"; version="1.1-1"; sha256="0zjazyz92criiimpz4wyd4hd8ccspvh3hhqpd4qkfdzdf9wp3kns"; depends=[Imap]; }; breakfast = derive2 { name="breakfast"; version="2.1"; sha256="11i7lqzzkp7ipvi49cv448jz39mlchrpkw2cslhzzj2ha2j785nm"; depends=[plyr Rcpp]; }; breakpoint = derive2 { name="breakpoint"; version="1.2"; sha256="004vi1qr7iib8ykg6sp7xzv0bb841h4vsz2x0cyrhkdp41frglx9"; depends=[doParallel foreach ggplot2 MASS msm]; }; - breathtestcore = derive2 { name="breathtestcore"; version="0.8.0"; sha256="08f3bdhpzrb1b2qj3yvf8zaq02vghhq54mzm5brlqw510hq2r6gz"; depends=[assertthat broom dplyr ggfittext ggplot2 MASS multcomp nlme purrr readr readxl signal stringr tibble tidyr xml2]; }; + breathtestcore = derive2 { name="breathtestcore"; version="0.8.1"; sha256="1cdv3qc5bydpchw2qz8wgqsc1hjn0q97bsk05gm8s0xfxmkfn3jb"; depends=[assertthat broom dplyr ggfittext ggplot2 MASS multcomp nlme purrr readr readxl signal stringr tibble tidyr xml2]; }; breathteststan = derive2 { name="breathteststan"; version="0.8.0"; sha256="1h05yqpsa1r6p0iybwh7rap0n10vr2wj2driq7qyq6wk6y14m8hc"; depends=[BH dplyr purrr Rcpp RcppEigen rstan rstantools StanHeaders stringr tibble tidyr]; }; brew = derive2 { name="brew"; version="1.0-6"; sha256="1vghazbcha8gvkwwcdagjvzx6yl8zm7kgr0i9wxr4jng06d1l3fp"; depends=[]; }; - brglm = derive2 { name="brglm"; version="0.7.1"; sha256="1v68ma1agwhxar76mfvdfkcnd5h4gmxiz8j491rhdsckg271j7sa"; depends=[profileModel]; }; - brglm2 = derive2 { name="brglm2"; version="0.7.0"; sha256="00dn50yv72dnkyggg5qkr7gyij1ghv984bjv2alza8qjmpc1ncyw"; depends=[enrichwith lpSolveAPI MASS Matrix nnet numDeriv]; }; + brglm = derive2 { name="brglm"; version="0.7.2"; sha256="08shcz0j1npdn7xkhsvlzs3z4rdwq3g4rk6a4xx8wirqw8n8s2an"; depends=[profileModel]; }; + brglm2 = derive2 { name="brglm2"; version="0.7.1"; sha256="0h510yfy4ai15iq1l6l3cwbvh69gijlfv1ac9mqbyhbnq37rgwb1"; depends=[enrichwith lpSolveAPI MASS Matrix nnet numDeriv]; }; + briKmeans = derive2 { name="briKmeans"; version="0.1"; sha256="026wga5lqr8i6zxi8jnw466d40r9qf1blb7l331h9vaj2j169iax"; depends=[boot cluster depthTools]; }; brickr = derive2 { name="brickr"; version="0.3.5"; sha256="1a6yxhq2zly3i3gs4dd19xhyrin1qaxdr7x3a887j7zbcj0j4z9q"; depends=[colorspace dplyr farver ggplot2 magrittr purrr rgl scales tidyr]; }; bridgedist = derive2 { name="bridgedist"; version="0.1.0"; sha256="0hqkpwpi3nv6mfhljl65zcflf4wy72ag36hdam6s7kynfj41qz6w"; depends=[]; }; bridger2 = derive2 { name="bridger2"; version="0.1.0"; sha256="0clp42nnbvd01n65azdi2ghp0mfqwsipzdl2d30q04lcvfkdpxrf"; depends=[BSDA data_table ggplot2 outliers plotly shiny shinydashboard]; }; - bridgesampling = derive2 { name="bridgesampling"; version="1.0-0"; sha256="1awhvv0v42w2q6llqi1wqpaiv5zx74cqzigdsvphy2jfp8ajw64y"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; }; - brinton = derive2 { name="brinton"; version="0.2.1"; sha256="1v1kzhydxv3m8mg3wl7znrn8z3x4wk15p5a9jpq63qyqms1ld5ph"; depends=[forcats GGally ggplot2 glue gridExtra lubridate pander RColorBrewer rmarkdown sm tibble]; }; - brio = derive2 { name="brio"; version="1.1.0"; sha256="0f7amcd2cjm09aiq39209cz680l5d2gqpp6wwfhz24zagfsa7cvb"; depends=[]; }; + bridgesampling = derive2 { name="bridgesampling"; version="1.1-2"; sha256="0sry1xwiv4y52k44hq6z8y2kysp5kxgl4dix3m94svg3ladd7v2l"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; }; + brinton = derive2 { name="brinton"; version="0.2.5"; sha256="0jiw14glfhh13dkwn2x36q92gfhadna0fq4vs0f83nq8sqnx4s4m"; depends=[forcats GGally ggplot2 glue gridExtra lubridate pander RColorBrewer rmarkdown sm tibble]; }; + brio = derive2 { name="brio"; version="1.1.2"; sha256="1vviykwx1z71yhk1xl87riaygj8sq0sj7ixyig1irqsi66aydpa2"; depends=[]; }; briqr = derive2 { name="briqr"; version="0.1.0"; sha256="073pdk1094ng4kggzdjvihl791r2qlja1j2w3pfmh2027kn520r8"; depends=[dplyr httr jsonlite magrittr tibble]; }; + briskaR = derive2 { name="briskaR"; version="1.0.2"; sha256="1m5ck90wc90wr5gbgzl3b9inxxng1sbaz5kdvy9s3jnyxspz97jn"; depends=[deldir deSolve fasterize fftwtools MASS mvtnorm raster Rcpp RcppArmadillo rgdal rgeos sf sp testthat]; }; brlrmr = derive2 { name="brlrmr"; version="0.1.7"; sha256="0s47qz8y416x0gz91pzdpr97pmlvddwkvll454vnlafxxk9p5lds"; depends=[boot brglm MASS profileModel Rcpp]; }; brm = derive2 { name="brm"; version="1.1.1"; sha256="0kyr8mxz5g3w41kp08d47f29cff8fqrfbm1ri7hgfg2lgr1151xy"; depends=[]; }; - brms = derive2 { name="brms"; version="2.14.4"; sha256="0mzwihhgmn405l6zq11a180q4k3chggj9qj0j7q838b9vrszg59j"; depends=[abind backports bayesplot bridgesampling coda future ggplot2 glue loo Matrix matrixStats mgcv nleqslv nlme projpred Rcpp rstan rstantools shinystan]; }; + brms = derive2 { name="brms"; version="2.15.0"; sha256="0byc3fyvf9qbvvgwf55ih5d4br1nnxlbaidq9fvr11bmv38h25y1"; depends=[abind backports bayesplot bridgesampling coda future ggplot2 glue loo Matrix matrixStats mgcv nleqslv nlme projpred Rcpp rstan rstantools shinystan]; }; brnn = derive2 { name="brnn"; version="0.8"; sha256="119lxm691ci2bf62jwmbhqsl39xy3jvsi988rr6sdslwaxqyx35b"; depends=[Formula truncnorm]; }; brokenstick = derive2 { name="brokenstick"; version="1.1.0"; sha256="02n8fv84cfj32mg08ylpg19alf69kkpknpvd6mx86lclhaqa3cnf"; depends=[dplyr lme4 matrixsampling rlang tidyr]; }; - brolgar = derive2 { name="brolgar"; version="0.1.0"; sha256="1q7rcr59s482f2vg0wifjkwfbrnqq12lbfqfixr2m1njv2ps35vg"; depends=[dplyr fabletools ggplot2 glue magrittr purrr rlang tibble tidyr tsibble vctrs]; }; - broman = derive2 { name="broman"; version="0.71-6"; sha256="02ka3h1d2hl17bz3793yhglabswr6w3xr0x41dzxpn9ziw3w74n0"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; - broom = derive2 { name="broom"; version="0.7.3"; sha256="0bxwmqj37m06ci378xqlf7kar7pg5g903i1vnrv4i256dkj50mny"; depends=[backports dplyr ellipsis generics glue purrr rlang stringr tibble tidyr]; }; - broom_helpers = derive2 { name="broom.helpers"; version="1.1.0"; sha256="1h835wi6gah6hs11cdlgr9d7qnkq65n4qw5qdiqdkdcfsr27dv7v"; depends=[broom dplyr emmeans labelled lifecycle purrr rlang stringr tibble tidyr usethis]; }; + broman = derive2 { name="broman"; version="0.72-4"; sha256="06jywrhsjnwacr3n5wzyr1w4c2z23s3hvspj93gjvwn0rnma3sk3"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; + broom = derive2 { name="broom"; version="0.7.6"; sha256="1ljcl8mh0yqxw3qxzar482qwbxbcaim1x6y1wm82ws12pfdw0j8n"; depends=[backports dplyr ellipsis generics glue purrr rlang stringr tibble tidyr]; }; + broom_helpers = derive2 { name="broom.helpers"; version="1.3.0"; sha256="1c5pzvnvrxrnw3ccfb4b8fdyrw5mf0q0i6isxh9nbm9wgbrk29g0"; depends=[broom cli dplyr labelled lifecycle purrr rlang stringr tibble tidyr]; }; broom_mixed = derive2 { name="broom.mixed"; version="0.2.6"; sha256="1858dninq16s8p00hapn9vb3i1r5alia50bi89a37zcnap31ibai"; depends=[broom coda cubelyr dplyr nlme plyr purrr reshape2 stringr tibble tidyr TMB]; }; - broomExtra = derive2 { name="broomExtra"; version="4.1.0"; sha256="0js4qm1y9pkhyaxk10yknq3bfvgnchbd80l01mb3ifxzplx6xb0z"; depends=[broom broom_mixed dplyr magrittr parameters performance rlang tibble]; }; + broomExtra = derive2 { name="broomExtra"; version="4.2.1"; sha256="0i4wbh79663n7x97il04vnbmidpy5zga1197s98ja68wcryqmsxl"; depends=[broom broom_mixed dplyr magrittr parameters performance rlang tibble]; }; brotli = derive2 { name="brotli"; version="1.2"; sha256="07rgdgxh9bvn0qavpclxmkglwyl6ndqasxcs6j12if698dkn976b"; depends=[]; }; brr = derive2 { name="brr"; version="1.0.0"; sha256="050ivnqcaxiyypd1sxfpy6ianhzzmvs6c77ga40g3440cvfigkgw"; depends=[gsl hypergeo pander stringr SuppDists TeachingDemos]; }; brranching = derive2 { name="brranching"; version="0.6.0"; sha256="032n5yp75bkzwb24zbad25f2059hqgdkv6mxsbb49pda34rm6y76"; depends=[ape conditionz crul curl phylocomr phytools taxize]; }; - brt = derive2 { name="brt"; version="1.3.0"; sha256="13fn2mv66fys7w0xchh69sb6jggg5c2imk1psi3mlr1902m6ss5m"; depends=[ggplot2]; }; + bruceR = derive2 { name="bruceR"; version="0.6.2"; sha256="0nrisl85ldvvg3m9pkvqi201lrh80ipxm5wmdh39j4zzivdwqibx"; depends=[cowplot crayon ggplot2 ggtext glue interactions jmv mediation MuMIn pacman performance see texreg]; }; brunnermunzel = derive2 { name="brunnermunzel"; version="1.4.1"; sha256="1lba5cpiray65zg1pv3xv6yl1xg78rqlwxkcmhgizlh1rhpd430p"; depends=[]; }; - brxx = derive2 { name="brxx"; version="0.1.1"; sha256="00lk6h74f8r98is5lp9bhv56jypkx0vljv9k1cb6rj7j44iqjlc0"; depends=[blavaan blme MASS MCMCpack]; }; + brxx = derive2 { name="brxx"; version="0.1.2"; sha256="08qlfnf84k3yjcvr1wm6gd96mk26xf2gz59ychb3m981228hbbs6"; depends=[blavaan blme GPArotation MASS MCMCpack rstan TeachingDemos]; }; bs4Dash = derive2 { name="bs4Dash"; version="0.5.0"; sha256="1y75i6bsdy1bsbzwjblsnimw1zzk0zl3qnzqfq9zcnf6q2ghi3r2"; depends=[htmltools shiny]; }; + bsTools = derive2 { name="bsTools"; version="0.1.0"; sha256="08h029gznsw93xirsxc1ib61qpqw1k8qzc0cjha56yr4j8b8qagy"; depends=[html5]; }; bsam = derive2 { name="bsam"; version="1.1.3"; sha256="1yiplh4wcc711w59ir5hxlp3mmgsnfz01d6203vfgclzsi7ix5m9"; depends=[coda dplyr ggplot2 gridExtra lubridate msm mvtnorm rjags rworldxtra sp tibble]; }; bsamGP = derive2 { name="bsamGP"; version="1.2.3"; sha256="1wqs2y9f7fgdvshhzwpjp811h4xhdd1lplpadnpffa2lmyv7vh5s"; depends=[ggplot2 gridExtra MASS]; }; - bscaling = derive2 { name="bscaling"; version="1.0"; sha256="0v1l6ycf1fyxn79rnhlrfnliirbz9snh8rinfzf34yhlnl0chk1p"; depends=[]; }; bsearchtools = derive2 { name="bsearchtools"; version="0.0.61"; sha256="11fqz8kdhqpc3jq34vgv3frzawgsl5y0s83rb2p54yb5yhd3p68w"; depends=[Rcpp]; }; bsem = derive2 { name="bsem"; version="1.0.0"; sha256="1h4wsib6ppqj8nbvj4pzkm04bzrdkg9l7xfmzzmld9cswai4iw52"; depends=[BH coda DiagrammeR lattice magrittr Rcpp RcppEigen rstan rstantools shiny StanHeaders viridis visNetwork]; }; bshazard = derive2 { name="bshazard"; version="1.1"; sha256="1kidypyqlilf794mksjvhja8bmnd9hdhz91ywy0mcddgc6wbar4h"; depends=[Epi survival]; }; + bslib = derive2 { name="bslib"; version="0.2.4"; sha256="0qlpv2lqr3hjykszmnll7vi4zhmrz4rgcfl0sifxc6cha6jy2nac"; depends=[digest htmltools jquerylib jsonlite magrittr rlang sass]; }; bspec = derive2 { name="bspec"; version="1.5"; sha256="0jynvir7z4q1vrvhdn6wijdrjfrkk4544nlawabw2fnfxss91a91"; depends=[]; }; bsplinePsd = derive2 { name="bsplinePsd"; version="0.6.0"; sha256="0f785l02hiq3f7anxqhm09f7lrqgkkqhly7f1x78cxm22hvrqyhg"; depends=[Rcpp]; }; bsplus = derive2 { name="bsplus"; version="0.1.2"; sha256="19vz8f9ln7kf3myx30lpcz8viv51bbl7n6nppys0zrzb6372cpn1"; depends=[glue htmltools jsonlite lubridate magrittr purrr rmarkdown stringr]; }; bspm = derive2 { name="bspm"; version="0.3.7"; sha256="0fll8kiqn7bcmf1cm4p9i4sny2b6ijk7ls77v5w0cvr8zsbfm8ly"; depends=[]; }; bspmma = derive2 { name="bspmma"; version="0.1-2"; sha256="1a3p1h7bks5yrxv791wfa680v4a6q10p59iz6wvfifhf3ndlaw49"; depends=[]; }; - bssm = derive2 { name="bssm"; version="1.0.1-1"; sha256="09pxpyh40fa7ljfn5xal8n2q3zxcdv73bfn91q2s0zfjbwpfijip"; depends=[coda diagis ramcmc Rcpp RcppArmadillo sitmo]; }; + bssm = derive2 { name="bssm"; version="1.1.4"; sha256="0b7my0w6ri53m9cibfwr8rwnawnmkppbw41755ar1ingx7zxqalp"; depends=[coda diagis ramcmc Rcpp RcppArmadillo sitmo]; }; bssn = derive2 { name="bssn"; version="1.0"; sha256="1brxbvcvqy8n9xpvp5kz47x5ps8hdqgnh6s49051qaylp95qm432"; depends=[ClusterR mvtnorm sn ssmn]; }; bst = derive2 { name="bst"; version="0.3-23"; sha256="1wx039cl8s1j1dwjg50ivn39fckkf8mzgrm953bg02w0p0fpz5bh"; depends=[doParallel foreach gbm rpart]; }; - bsts = derive2 { name="bsts"; version="0.9.5"; sha256="17q82f57xgzgil06z47dgkll88iz6qng7nxw1gjn6sqi5zk72lxq"; depends=[Boom BoomSpikeSlab xts zoo]; }; + bsts = derive2 { name="bsts"; version="0.9.6"; sha256="0b2xa5g4hydwn0chwn91d4mng4gq90fdaynh794ri4zbqpshs3xg"; depends=[Boom BoomSpikeSlab xts zoo]; }; bsub = derive2 { name="bsub"; version="1.0.2"; sha256="08ahmhg8fcrb5v14g3ij1qi3vpc92r9w02q9h64a7a1m64fib4lw"; depends=[clisymbols crayon digest GetoptLong GlobalOptions]; }; btb = derive2 { name="btb"; version="0.1.30.3"; sha256="00asbzjgcjd1cm5m1yndbgr60zpvnhbk5b7rhkhc2z1w513bwi8w"; depends=[BH Rcpp RcppArmadillo RcppParallel sf sp]; }; btergm = derive2 { name="btergm"; version="1.9.13"; sha256="1md5mxr5in9ag2ydgrkk9kk27zxjx5a9hfxm0mxp3xxcks9h7xk2"; depends=[boot coda ergm ggplot2 igraph Matrix network ROCR RSiena sna speedglm statnet_common xergm_common]; }; bubblyr = derive2 { name="bubblyr"; version="0.1.2"; sha256="04agfwk6rmbhlfblfw1irqnv3yrp00zfn4qwy2169b7ypg8r55v2"; depends=[glue htmltools]; }; bucky = derive2 { name="bucky"; version="1.0.6"; sha256="01rlx0m6h66y1p9k5llg17qpajjhk2vmhbpwc4i5igf5x5g4clgc"; depends=[lmtest sandwich]; }; - buildmer = derive2 { name="buildmer"; version="1.7.1"; sha256="1439l4kr42ba5z6sh1yds9578zpi0v5c0hwwmb3yh2r5g4lxlrmd"; depends=[lme4 mgcv nlme plyr]; }; - buildr = derive2 { name="buildr"; version="0.0.4"; sha256="1h678bfha02harq0gf35j6rhbwcvf9yzqqidm7131hki42xg2w2q"; depends=[]; }; + buffeRs = derive2 { name="buffeRs"; version="0.21"; sha256="0rrjjnqjv1xdc5s7s0l08mir5r69zzcl81cg5sbfq6waskr6z6nj"; depends=[sf]; }; + buildmer = derive2 { name="buildmer"; version="1.9"; sha256="12nl73m0bc02lcyglxxrgi67nrylrxbn6946h3mbvr57jygpp39l"; depends=[lme4 mgcv nlme plyr]; }; + buildr = derive2 { name="buildr"; version="0.1.0"; sha256="125s41d2ahww7ngli2mgl5999syjm5q5mxskv6jjrnfv7l6vhm3k"; depends=[glue magrittr readr rstudioapi stringr tibble usethis]; }; bujar = derive2 { name="bujar"; version="0.2-9"; sha256="1hx9yrry1v3vl14y1wpfp1l3cymyqhnff86sv6b112b9cfjpwmvq"; depends=[bst earth elasticnet gbm mboost mda modeltools mpath rms survival]; }; bulletcp = derive2 { name="bulletcp"; version="1.0.0"; sha256="1k7lw8gflih47ncz8hgsj0sxbajnkhz1k7yb7rwbdnzcki3n3jln"; depends=[assertthat dplyr mvtnorm Rdpack]; }; bulletr = derive2 { name="bulletr"; version="0.1"; sha256="181rnrp62almf08gr41qnrnq8qnbqraqdvj4zixdh8fachsq2imp"; depends=[dplyr ggplot2 plotly plyr reshape2 robustbase smoother xml2 zoo]; }; bullwhipgame = derive2 { name="bullwhipgame"; version="0.1.0"; sha256="03nwf2v4zhgkxvkghpkbkxz0cnkqcwwl51ykrk25qciakfqkgfws"; depends=[shiny]; }; + bumbl = derive2 { name="bumbl"; version="1.0.0"; sha256="0s8kxcrii6pvqxannhhcni5k2hashs6gz0h859ic06xhmlfp92zz"; depends=[broom dplyr ggplot2 glue MASS purrr rlang tidyr]; }; bunching = derive2 { name="bunching"; version="0.8.4"; sha256="0hb50xxlpia3149kyp0df4dmfkxvblnj7hd24c7ylglxzx2hq59j"; depends=[BB dplyr ggplot2 tidyr]; }; bunchr = derive2 { name="bunchr"; version="1.2.0"; sha256="1b8hdg2x26k0ahx4gxdpzr36hy056939r4496q3vbgyd4bbk2fbd"; depends=[shiny]; }; bundesbank = derive2 { name="bundesbank"; version="0.1-9"; sha256="05sc6m2v8bfgdka7v28rxhq5a8c88gsxkv0zjk08rpw8k8zql0dk"; depends=[]; }; bundesligR = derive2 { name="bundesligR"; version="0.1.0"; sha256="0dnhbh9jh7dfbk7mfh8msq4ys5kakalr0kwkycycrb2q8rd049vp"; depends=[]; }; bupaR = derive2 { name="bupaR"; version="0.4.4"; sha256="0ysxvp9ksn00mghll62k0a2qgrqccvprn5zwywsp77rhfb97pfdg"; depends=[data_table dplyr eventdataR forcats glue lubridate magrittr miniUI purrr rlang shiny stringr tidyr]; }; - burnr = derive2 { name="burnr"; version="0.5.0"; sha256="19kkk4cyd7h3idn8di77426lcmq2jkxaksbpvg87hpkn72vcr8y5"; depends=[ggplot2 MASS plyr reshape2]; }; + burnr = derive2 { name="burnr"; version="0.6.0"; sha256="1xpdd6nni3zca2mabrq1bkgiqlk67v6mn6ykfrx95h8afzjr4k1p"; depends=[forcats ggplot2 MASS plyr reshape2 rlang stringr tidyr]; }; bursts = derive2 { name="bursts"; version="1.0-1"; sha256="172g09d1vmwl83xs6gr4gfblqmx3apvblpzdr5d7fcw1ybsx0kj6"; depends=[]; }; busdater = derive2 { name="busdater"; version="0.2.0"; sha256="0hib73zay9r7rv49zv1lx0l15jzjyli9f1vrk414l8apggvx4c6s"; depends=[lubridate]; }; - butcher = derive2 { name="butcher"; version="0.1.2"; sha256="0z3rpjvrr42j1qqzmadigcq2ivqd40dhz7yymjmbap9nbz26rb3l"; depends=[fs lobstr modeldata purrr rlang tibble usethis]; }; + butcher = derive2 { name="butcher"; version="0.1.4"; sha256="17zf76ymv999wvrsrx40z4g8nnpax92mf5mbxpgy62b84swsxc30"; depends=[fs lobstr purrr rlang tibble usethis]; }; bvarsv = derive2 { name="bvarsv"; version="1.1"; sha256="1bv4fbbi8bn7sqqpjlf8w5jpgydjr15wv5v9940wc42yk792yjrx"; depends=[Rcpp RcppArmadillo]; }; - bvartools = derive2 { name="bvartools"; version="0.1.0"; sha256="1acwfapxz23d24w8f98wszc8j4db5mxhp1fpp06kzadi5cb2a6gg"; depends=[coda Rcpp RcppArmadillo]; }; + bvartools = derive2 { name="bvartools"; version="0.2.0"; sha256="0s5i902f35zkdm12zl3dmf896hv1bll0rnxl58679bam9q50dqk5"; depends=[coda Rcpp RcppArmadillo]; }; bvenn = derive2 { name="bvenn"; version="0.1"; sha256="1xrya49w5bd2b7plfxpqla60b2828rkm0rjmc4qnqzvrahsbal0y"; depends=[]; }; bvls = derive2 { name="bvls"; version="1.4"; sha256="18aaf7kk5mks3a59wwqhm1ckpn6s704l9m5nzy0x5iw0s98ijbm2"; depends=[]; }; bvpSolve = derive2 { name="bvpSolve"; version="1.4.1"; sha256="0pxpnf19g085c1a4nb2j48nr611fg1sdl7jlv79nmy4b985yqvrw"; depends=[deSolve rootSolve]; }; @@ -6217,56 +6447,62 @@ in with self; { bysykkel = derive2 { name="bysykkel"; version="0.3.1"; sha256="1lvqbax7dvli4265856f9667ckp9g5l4radz2cp0yk0slsjgsdpg"; depends=[glue httr jsonlite lubridate tibble]; }; bytescircle = derive2 { name="bytescircle"; version="1.1"; sha256="0c83d37kijcvr00pc4qqdci14cpbg6988izyjfjk1yliavyc6mwf"; depends=[]; }; bzinb = derive2 { name="bzinb"; version="1.0.4"; sha256="1424lwsm2ra124h0ahbl42szbx500fqkf9ccw9k1688iwxnfg7f2"; depends=[BH Rcpp]; }; - c060 = derive2 { name="c060"; version="0.2-5"; sha256="1862lic0vvidbd7s63j65iz4rf70d5337l80vvrbgv8d7fhnxz0y"; depends=[glmnet lattice mlegp penalizedSVM peperr survival tgp]; }; + c060 = derive2 { name="c060"; version="0.2-7"; sha256="1jkwi95033qn609rx7m466zv33r7dy1959ja01gd89mwyxamyid3"; depends=[glmnet lattice mlegp penalizedSVM peperr survival tgp]; }; c212 = derive2 { name="c212"; version="0.98"; sha256="0pzg239602iq56nhxfdvlk26z58lz6vvlbwsdpwhmich0by4gx4x"; depends=[coda]; }; c2c = derive2 { name="c2c"; version="0.1.0"; sha256="149np512wjnlr9glmqxpiamf6c31v0bh6ym95jpdhk0iw3ic9kvh"; depends=[]; }; c3 = derive2 { name="c3"; version="0.3.0"; sha256="1c2k7ml153bby749qi3a6nckhwwr71mvvps9dkbzkxkwnmlwpz1h"; depends=[data_table dplyr htmlwidgets jsonlite lazyeval viridis]; }; c3net = derive2 { name="c3net"; version="1.1.1"; sha256="0m4nvrs41kmlakc6m203zlncqwgj94wns8kzcb31xngjcacmcq42"; depends=[igraph]; }; cAIC4 = derive2 { name="cAIC4"; version="0.9"; sha256="0imy4kq09an9azqi3aahw3lsmby8km2am0w7fb314xq6ghzf9xmp"; depends=[lme4 Matrix mgcv mvtnorm nlme RLRsim]; }; cIRT = derive2 { name="cIRT"; version="1.3.1"; sha256="1x7cbawzzpzripzyg4yavc9s6kx06ff4q151kbvylr9wsf78s6qg"; depends=[Rcpp RcppArmadillo]; }; - cNORM = derive2 { name="cNORM"; version="2.0.0"; sha256="1pj9mwkb1hq9wvhgngw3gayl0jri861j5dcf4k3albfw15qdxxx2"; depends=[lattice latticeExtra leaps]; }; + cNORM = derive2 { name="cNORM"; version="2.0.3"; sha256="1grq0vf55i76wkmj23rb2z2c93j1kdq9g5arpi6jvfylzpfm4y6c"; depends=[lattice latticeExtra leaps]; }; cOde = derive2 { name="cOde"; version="1.0.0"; sha256="12222wlsk9l6m9y477mjl8x279xhs8c1l1wsq92khwycm1j06jfy"; depends=[]; }; cPCG = derive2 { name="cPCG"; version="1.0"; sha256="1pfbsv2rcjsryn6nr56a7i4yb7k0m3gdfn4q9l1kpzhmv9lic7m1"; depends=[Rcpp RcppArmadillo]; }; cRegulome = derive2 { name="cRegulome"; version="0.3.2"; sha256="0cvxad73l85zsgqmis5p24v71kkzi784b8v5z07f0dh9yp41p96q"; depends=[DBI ggplot2 ggridges httr igraph R_utils RSQLite UpSetR VennDiagram]; }; - cSEM = derive2 { name="cSEM"; version="0.3.0"; sha256="1fl486lm5mxr9pxmpjy0xbzq43gq3v2s6j6g9w7r7ck6mfd53ivb"; depends=[abind alabama cli crayon expm future future_apply lavaan lifecycle magrittr MASS Matrix matrixcalc matrixStats polycor progressr psych purrr Rdpack rlang symmoments]; }; + cSEM = derive2 { name="cSEM"; version="0.4.0"; sha256="1h9n33akvh7cyl1r3pa64nxzr9z1723fqcfxa4p3kh6jp5ysqlvp"; depends=[abind alabama cli crayon expm future future_apply lavaan lifecycle magrittr MASS Matrix matrixcalc matrixStats polycor progressr psych purrr Rdpack rlang symmoments]; }; ca = derive2 { name="ca"; version="0.71.1"; sha256="095lk7p2b9835hc3a03c4019wg0baf0dhz6c2vqpaq1m9k4jy304"; depends=[]; }; caMST = derive2 { name="caMST"; version="0.1.3"; sha256="1hhxyw7sbzm2v09xaxvq347gl8p5wkjxx43187mqbw0nzknlg5bg"; depends=[catR diagram mstR]; }; + caROC = derive2 { name="caROC"; version="0.1.5"; sha256="0cklvzfg95yyr37hdfmrna2z6lnhf9f6rrqcjsba1wjmqs8abgsh"; depends=[quantreg RColorBrewer]; }; caRamel = derive2 { name="caRamel"; version="1.2"; sha256="15w1p770cjsxs198rlc8fzs9m8a4pg5day2iya7xz0fkwb3xmm2z"; depends=[geometry]; }; + caRecall = derive2 { name="caRecall"; version="0.1.0"; sha256="1ml8cfsi4h8q5f0y3m6s5v8sdldj302ndl75m6f7lagsiiiwhd77"; depends=[httr jsonlite tibble]; }; caRpools = derive2 { name="caRpools"; version="0.83"; sha256="10m7fw1zfr9i6v2qg235diwf3fmfr88incxnqpvnhmqcn082mxrp"; depends=[biomaRt DESeq2 rmarkdown scatterplot3d seqinr sm VennDiagram xlsx]; }; - caTools = derive2 { name="caTools"; version="1.18.0"; sha256="0y1kgyiy322yhb0phzwvf2zgjz9awp13lhzhk9v1ddg88656jhq3"; depends=[bitops]; }; + caTools = derive2 { name="caTools"; version="1.18.2"; sha256="14q2ry8gaszjl0m97qg62dxv5bpj6k02qwyi7q2lnxgcmwai3mkm"; depends=[bitops]; }; cabinets = derive2 { name="cabinets"; version="0.6.0"; sha256="1pypn29v91zqncv5kxinfz0f633qmic7n87rf4amjrq83iiid6md"; depends=[cli crayon fs git2r glue R6 renv rstudioapi stringr]; }; cabootcrs = derive2 { name="cabootcrs"; version="2.0"; sha256="1a473ca90306brhfrzf5hw6d6v252kd2vfwkvgblwy26jmrrr2km"; depends=[lpSolve]; }; cacIRT = derive2 { name="cacIRT"; version="1.4"; sha256="145j6isqa8yj2nvlqkxagd076zs10ng3n44khi5p4jj77fjc8gh6"; depends=[]; }; + cachem = derive2 { name="cachem"; version="1.0.4"; sha256="1b1gk837rk9kbfq385ybrrk12ckxwvhjvf0z9635l3vw49wal4mh"; depends=[fastmap rlang]; }; caesar = derive2 { name="caesar"; version="1.1.0"; sha256="17w19m1c4a8x68bfbll71r9d3d34xnqw7lkhvqbnajd0cdm9xpa2"; depends=[binhf]; }; caffsim = derive2 { name="caffsim"; version="0.2.2"; sha256="00bkgmmqrydpji2pvhcchgl2p8w5ksby4g80i3h76q0bm2325w9h"; depends=[dplyr ggplot2 markdown mgcv shiny tibble tidyr]; }; cairoDevice = derive2 { name="cairoDevice"; version="2.28.2"; sha256="0hd8lcps8s2nmbqgrxc19dslsvppn1fbwylczx6h3isiv9zmxapj"; depends=[]; }; calACS = derive2 { name="calACS"; version="2.2.2"; sha256="0a53k2rzyjksb0ypr5zrask4a6mgiyrqx0l2z3lm218y8pk2jf1w"; depends=[]; }; calcUnique = derive2 { name="calcUnique"; version="0.1.2"; sha256="012mjayj90m5gsd8mhm2ic00pa0bnrjiidq9mv4vxj8slwp641rz"; depends=[]; }; calcWOI = derive2 { name="calcWOI"; version="1.0.3"; sha256="1bxsn9b99hnb365qvlzr0ymwavamlyhs5sm9s2fdjh4zv3f32n3l"; depends=[dualtrees LS2W wavethresh]; }; - calculus = derive2 { name="calculus"; version="0.2.1"; sha256="0hs7hzjl6xjza20v9zx9a1piywxa6w3h2rskr52d1dcbc0vwhinp"; depends=[Rcpp]; }; + calculus = derive2 { name="calculus"; version="0.3.0"; sha256="1wa5ap89cfcp0ancj9ivx5s2y0wqr2vmp9y115g7f6g772jwhscj"; depends=[Rcpp]; }; calendR = derive2 { name="calendR"; version="1.1"; sha256="1gji7ns35swdgg7bzq3vrzi4hnb98c5iw6r1j0k7nn2fdx7kbffp"; depends=[dplyr forcats gggibbous ggimage ggplot2 suncalc]; }; calendar = derive2 { name="calendar"; version="0.0.1"; sha256="18ha6vpx2bpk8p08hajiq2d201fbqhzcycp8ks6wrr06fy04z689"; depends=[lubridate tibble]; }; calibrar = derive2 { name="calibrar"; version="0.2.0"; sha256="1544bc5rhhc6d1mky7ngza00wwh63q07dkbzlwfgyavly8m9cplb"; depends=[cmaes foreach optimx]; }; calibrate = derive2 { name="calibrate"; version="1.7.7"; sha256="19kgrnsyq67iqv1biyssqi30a6v2836ql20nabpy2m692ns0jfvi"; depends=[MASS]; }; calibrateBinary = derive2 { name="calibrateBinary"; version="0.1"; sha256="1k6sl4bg05piyczpk6wsva914gcmy8viyz4423gx9i6ddflb7xdb"; depends=[gelnet GPfit kernlab randtoolbox]; }; calibrator = derive2 { name="calibrator"; version="1.2-8"; sha256="1m9g1pmnr6d9jkg5ab0l0cbqfj7kmx7sdmcdqdhn9ifyhhn7812y"; depends=[cubature emulator mvtnorm]; }; - callr = derive2 { name="callr"; version="3.5.1"; sha256="15l6ppsxdadlnl4fk0f8bvf327n8izk96px5d08m1ay9iij8qcyf"; depends=[processx R6]; }; + caliver = derive2 { name="caliver"; version="2.0.0"; sha256="04qa3zrk70c8ak70djfh23jyfxs8293s8wzkk6cs0nyrknhaxzzj"; depends=[ggplot2 lubridate ncdf4 raster rworldmap]; }; + callr = derive2 { name="callr"; version="3.7.0"; sha256="02inaf3c7b0hikii7p2zwaphrq5myv4in92d9jxd1ilmhla5awnn"; depends=[processx R6]; }; calmate = derive2 { name="calmate"; version="0.12.1"; sha256="07sjbq7bcrhal52pdzsb5pfmk6a8a44wg8xn79sv4y5v74c5xaqz"; depends=[aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; calpassapi = derive2 { name="calpassapi"; version="0.0.3"; sha256="1vhx5h7ah75cs1mlw25x7hal90m47596kr7fx2pd8fslq7il7p1b"; depends=[digest dplyr httr jsonlite stringr]; }; - campfin = derive2 { name="campfin"; version="1.0.4"; sha256="0c9hdg8ylw6m0drb87fcqj4pxkyg824xvp2554aw1qij4pk63f1q"; depends=[dplyr fs ggplot2 glue here httr lubridate magrittr purrr readr rlang scales stringdist stringr tibble]; }; + campfin = derive2 { name="campfin"; version="1.0.7"; sha256="0xjzz7bh2ymqfkia41fw95njadj21p5mm9iamh1frq7gra12875d"; depends=[dplyr fs ggplot2 glue httr lubridate magrittr purrr readr rlang scales stringdist stringr tibble]; }; camsRad = derive2 { name="camsRad"; version="0.3.0"; sha256="06gar6qan1ka01ngjvbpcv649yvfga697mplwn1x6qnfr4ngb7cs"; depends=[httr xml2]; }; camtrapR = derive2 { name="camtrapR"; version="2.0.3"; sha256="13zg8kx28il7rbyr2p3c1xdxx84b7shpcmgavzjqzh6wjm5bh5mh"; depends=[data_table overlap secr sp]; }; - cancensus = derive2 { name="cancensus"; version="0.3.2"; sha256="17qi7kx23iyvxy5yy6g46avlh988a8l4r7p040waqhz4nd9zy31q"; depends=[digest dplyr httr jsonlite rlang]; }; + cancensus = derive2 { name="cancensus"; version="0.4.2"; sha256="0wfcc5pvinwvby6yqwpxvby2ix6qyhzrbb04rs1dmrnnc4kk1h7w"; depends=[digest dplyr httr jsonlite rlang]; }; cancerGI = derive2 { name="cancerGI"; version="1.0.0"; sha256="1chkcyf9m98gbn6b3vmb1baw7kii4g5vxvg2xfi7i6wwdn8sqr65"; depends=[igraph qvalue reshape2 survival systemfit]; }; cancerTiming = derive2 { name="cancerTiming"; version="3.1.8"; sha256="1sfi8q2f5ag7iak0sf9pmqncb89w3gnxdiwjwpivkwhr28ais4mq"; depends=[gplots LearnBayes]; }; - candisc = derive2 { name="candisc"; version="0.8-3"; sha256="0bshi686sad31052glai1wmzxshvafp1vkar7zirds3x737gb0fp"; depends=[car heplots]; }; + candisc = derive2 { name="candisc"; version="0.8-5"; sha256="10njhfgj55b15kkvlb1648s1m7i8akb5502qc92aiyn0nw335701"; depends=[car heplots]; }; canprot = derive2 { name="canprot"; version="1.1.0"; sha256="0y6azzs603bf7rrz8hfql754xsdywl35846hj70f6sn1dj5wbzlk"; depends=[MASS rmarkdown xtable]; }; cansim = derive2 { name="cansim"; version="0.3.5"; sha256="0lqkyq2n8v2y172ihyb9vh3mimrkg2yx2c42cxdaz4p7gqiq7z8r"; depends=[dplyr httr jsonlite purrr readr rlang rvest stringr tibble xml2]; }; - canvasXpress = derive2 { name="canvasXpress"; version="1.29.6"; sha256="0xy85rj2zd972ziikycsfzghv3q54b2fw4nj29clj2liw4ksm5fq"; depends=[htmlwidgets httr]; }; - canvasXpress_data = derive2 { name="canvasXpress.data"; version="1.30.5"; sha256="1w6lyc02n2gd59y2q2wwmx8a0awwgv95y6pjcxbj8438djnlqkk7"; depends=[]; }; + canvasXpress = derive2 { name="canvasXpress"; version="1.32.9"; sha256="07ki6bak659k5r63b0bsin9s8lj722nnfdzlk5jysf27k5k7sn53"; depends=[htmlwidgets httr]; }; + canvasXpress_data = derive2 { name="canvasXpress.data"; version="1.32.7"; sha256="05ig4lnjjird6rkjpglvsb5l6wd8cs6vr69lwyzj6finzd5p5gsv"; depends=[]; }; cap = derive2 { name="cap"; version="1.0"; sha256="1pv8hskxjbp589dn7rx80yaa1ld76x1w37bss2fyrys1p3qr78aa"; depends=[MASS multigroup]; }; + cape = derive2 { name="cape"; version="3.1.0"; sha256="0r20c5z28jyc5djymwkfzczyi3rlnj20p00jhc4dsywjcp68fx6n"; depends=[abind caTools corpcor doParallel evd foreach here igraph Matrix pheatmap propagate qtl qtl2 qtl2convert R6 RColorBrewer regress shape stringr yaml]; }; caper = derive2 { name="caper"; version="1.0.1"; sha256="0md0sngj7wsv2d4d7fmyyz9qqismk3ps9l3qk1blqz1yi19pq124"; depends=[ape MASS mvtnorm]; }; capitalR = derive2 { name="capitalR"; version="1.3.0"; sha256="08lvncia9mdrnw84zydf1k7336xawiirh2swziqfwx3z1n172n52"; depends=[]; }; + capl = derive2 { name="capl"; version="1.39"; sha256="1883ypq64l8hxjn3l907js7gavl5nsswc46ngrfk6j1xra16fmcx"; depends=[dplyr ggplot2 lubridate magrittr readxl writexl]; }; capm = derive2 { name="capm"; version="0.14.0"; sha256="0c3rnc1qd9c4v0jj8ihg6bdhpqvfnpafkqyqkar6fwnlvgw48z83"; depends=[circlize deSolve dplyr FME ggplot2 magrittr sf survey tidyr]; }; capn = derive2 { name="capn"; version="1.0.0"; sha256="14vfk00xyx0az3whmxjpcv1785lf0gx81w7qc54i3wcfp3i22kcr"; depends=[]; }; captioner = derive2 { name="captioner"; version="2.2.3"; sha256="0xg72pmgm84f0v45phfwxpsslhf12nhn1swmrj1yifj7g9sjvybj"; depends=[]; }; @@ -6276,43 +6512,44 @@ in with self; { car = derive2 { name="car"; version="3.0-10"; sha256="1w95b7xm0bna3qm637pwyv4s7294ffz9dl153naprd79zv91dqqw"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; carData = derive2 { name="carData"; version="3.0-4"; sha256="09270j39n4jpswxqps20b12zaj8dz4rrqpk2l2j5bnf1xzizb9nd"; depends=[]; }; carSurv = derive2 { name="carSurv"; version="1.0.0"; sha256="0wv7lp10i4sdfqyizg77ghblp3pcp7wzhs946sm0wl6w00krav9j"; depends=[corpcor fdrtool mboost Rcpp survival]; }; - caracas = derive2 { name="caracas"; version="1.0.1"; sha256="157m594lyl9726cvyyw3vgbyphrmny01pd2c2yw464krfxxxv0i4"; depends=[reticulate]; }; + caracas = derive2 { name="caracas"; version="1.1.0"; sha256="1l171qyysjkbhpc3gn1lv9k3bbbdm9dv1y54ihi501c2wqfvkd3i"; depends=[magrittr reticulate]; }; carat = derive2 { name="carat"; version="1.4"; sha256="1dlmmnsdy1vjiv0fw1k0h0xzd05hqryzc4vw9gbjj3ii6jyds8hk"; depends=[ggplot2 gridExtra Rcpp RcppArmadillo stringr]; }; carbonate = derive2 { name="carbonate"; version="0.1.3"; sha256="0y1wjrlh0rbfl1wz9028b637gs20giifp9ykg1yir2ak7fpwbq85"; depends=[clipr details httr magick R6 RSelenium rtweet wdman yaml]; }; carcass = derive2 { name="carcass"; version="1.6"; sha256="0nhp35nxjqqmy15rf9vc0qyymy7d0v8mc84570b9nc62g5xac8xy"; depends=[arm expm lme4 MASS survival]; }; card = derive2 { name="card"; version="0.1.0"; sha256="1api0j06fp5av5a48vnnm1wvwdcskynf0xsj9pb41njxdh9v8daf"; depends=[broom data_table dplyr generics ggplot2 ggrepel hardhat Hmisc lubridate lutz magrittr purrr readr recipes rlang sf stringr survival tibble tidyr]; }; cardidates = derive2 { name="cardidates"; version="0.4.8"; sha256="1mfd5sgzswhs9rln2bgxx8c54z69xp8l5dfmx7jfh8jl43qkzpjf"; depends=[boot lattice pastecs]; }; - cardioModel = derive2 { name="cardioModel"; version="1.4"; sha256="1a2nvn4a4zc89pb01m20pxqgbj0ypzzvx9w2vfzwly1kzkhvc9hr"; depends=[lubridate nlme]; }; care = derive2 { name="care"; version="1.1.10"; sha256="00h36by40v60mqzbf615a99sdfz0i42i57wybxrcm7y1y2la0da8"; depends=[corpcor]; }; - careless = derive2 { name="careless"; version="1.1.3"; sha256="07yq6sfp110pkd3khfn8ajdqz2r4ipcs90mpaiynh12xl0n67x7k"; depends=[psych]; }; + careless = derive2 { name="careless"; version="1.2.1"; sha256="1zlkzrc9fw926knj6w7flv4q0w29k4aichawvprk94rk1bnrvdz5"; depends=[psych]; }; caret = derive2 { name="caret"; version="6.0-86"; sha256="0dyflixdw98lvk2x3w136sw24ij0fwx5c7l709dmqr5z7xy1qjns"; depends=[foreach ggplot2 lattice ModelMetrics nlme plyr pROC recipes reshape2 withr]; }; caretEnsemble = derive2 { name="caretEnsemble"; version="2.0.1"; sha256="127gqd23xjis62irqviihzk80zydrdplwh65zcmd7ng29ih5wnby"; depends=[caret data_table digest ggplot2 gridExtra lattice pbapply plyr]; }; carfima = derive2 { name="carfima"; version="2.0.2"; sha256="1n68jqn42m54xn7jq8qywrpnvggrcsgvgnlqg6nw0pgiplbkynih"; depends=[DEoptim invgamma mvtnorm pracma truncnorm]; }; + cargo = derive2 { name="cargo"; version="0.1.29"; sha256="108qpmj9ci5v0d3msnjdmqbk52n8nx7cmhfv3xfh2y1p26d9kqac"; depends=[]; }; caribou = derive2 { name="caribou"; version="1.1"; sha256="0ibl3jhvsgjfcva0113z0di9n5n30bs90yz0scckfv1c0pjhn4xd"; depends=[]; }; caroline = derive2 { name="caroline"; version="0.7.6"; sha256="1afxxbrd7w628l4pxdmvwbs7mbgxlhnfq3nxk2s93w47gn7r9fp7"; depends=[]; }; carpenter = derive2 { name="carpenter"; version="0.2.2"; sha256="13ahhdc6f5ngrhb7slqbxzfs3wswixh0argyr6l46cv4fdkaa80s"; depends=[dplyr lazyeval magrittr pander tibble tidyr]; }; carrier = derive2 { name="carrier"; version="0.1.0"; sha256="0bqnwnnjqjk9q0lxq6kkz9s75ss10lfyyywyyi24m8wppxpw1vqc"; depends=[pryr rlang]; }; cartograflow = derive2 { name="cartograflow"; version="1.0.3"; sha256="09n3pgm70frrx9li1djrwkf4lzcq9c1xjs037vmsb1as0xvd19a1"; depends=[dplyr ggplot2 igraph maptools plotly reshape2 rgeos rlang sf sp]; }; cartogram = derive2 { name="cartogram"; version="0.2.2"; sha256="0kz8hwdr5n8llkylwaixnb66f4pzaxxniz57spxhqizmi6qay7yd"; depends=[packcircles sf]; }; - cartography = derive2 { name="cartography"; version="2.4.2"; sha256="04i1lwf4l420dcgkzr529883yyhfirfr2b0bnksrwili44nfj9ai"; depends=[classInt curl png raster Rcpp rgeos sf slippymath sp]; }; + cartography = derive2 { name="cartography"; version="3.0.0"; sha256="1v1fr29hq98c9sp4f588x8kf5ysyi59cndcpxmkgv04qas0dlp2n"; depends=[classInt curl png raster Rcpp rgeos sf slippymath sp]; }; cartools = derive2 { name="cartools"; version="0.1.0"; sha256="0gc5502373f0c2m2rh6awvyfqrg1wx1f341dm2byk9znba887lgs"; depends=[animation devtools dplyr gapminder ggplot2 knitr rlist rmarkdown roxygen2 sde shiny tidyverse usethis]; }; carx = derive2 { name="carx"; version="0.7.1"; sha256="1qyqsj6pfzzqyaj6076zvgcimhl4cll6sxfb6aigm02rwfkq5gvh"; depends=[matrixStats mvtnorm nlme tmvtnorm xts zoo]; }; cascadess = derive2 { name="cascadess"; version="0.1.0"; sha256="105m5w8rb8bkzmlc5nwb4g0wl8jgvz63jxq665x4jfq0z78qiwgd"; depends=[crayon htmltools magrittr rlang]; }; caschrono = derive2 { name="caschrono"; version="2.2"; sha256="0lbf7j6p5gzm4kk8sgzcmxwwzg59wp6g6l38m04609lpcsvxkd52"; depends=[Hmisc zoo]; }; cascsim = derive2 { name="cascsim"; version="0.4"; sha256="0n6frnbby1pjpx1z9lzxflmja2mg0dy99c5f7biakpaqi82x5xjb"; depends=[copula fitdistrplus moments R2HTML scatterplot3d]; }; caseMatch = derive2 { name="caseMatch"; version="1.0.8"; sha256="0bp2g0zzcspa6riinsa3bp1qwiip6z058hn2y5mw0w9xah8a685a"; depends=[]; }; - casebase = derive2 { name="casebase"; version="0.9.0"; sha256="0ygbisqx4g0n0rf3gjydr2j278ar1pplzy9fy8al0yq0zcp4vi6s"; depends=[data_table ggplot2 mgcv survival VGAM]; }; + casebase = derive2 { name="casebase"; version="0.9.1"; sha256="1w06fh5mna6v8wglp1mx7z9370khhsa5wyyi7dmgrspsgi5831wa"; depends=[data_table ggplot2 mgcv survival VGAM]; }; casen = derive2 { name="casen"; version="0.1.4"; sha256="19f52vqrzqd8mmnaf39jmsm5mhydv74gpnb4rxr3n9w07ppb77c9"; depends=[dplyr glue haven janitor labelled magrittr purrr rlang srvyr survey tibble tidyr]; }; casino = derive2 { name="casino"; version="0.1.0"; sha256="07fphn46718gr1zm0xr43mwv7yk697xrc40lxxin315cf3gm0cka"; depends=[crayon dplyr ggplot2 magrittr purrr R6 tibble tidyr]; }; cassandRa = derive2 { name="cassandRa"; version="0.1.0"; sha256="0rwqzxbflxn1iyggm3mq6pkbl61mhk4vdwqwzlwrhrvvr2ib236r"; depends=[bipartite boot dplyr ggplot2 magrittr purrr reshape2 tidyr vegan]; }; - castor = derive2 { name="castor"; version="1.6.4"; sha256="0dl7j1ccbfr43c1jn2g956f12fvhwrf49w391s20d2q70fnmq7c7"; depends=[naturalsort nloptr Rcpp]; }; + castor = derive2 { name="castor"; version="1.6.7"; sha256="07q2bv6lcbng26dkzr5s5nqjn762i76nwldv5j79ihbl6k67l1f6"; depends=[Matrix naturalsort nloptr Rcpp RSpectra]; }; cat = derive2 { name="cat"; version="0.0-6.5"; sha256="1gv7chqp6kccipkrxjwhsa7yizizsmk4pj8672rgjmpfcc64pqfm"; depends=[]; }; - cat_dt = derive2 { name="cat.dt"; version="0.2.0"; sha256="1g9058gqkk2ij29aicvvqx9yx7iwh4a58akp6qznppfln4zw9wcb"; depends=[ggplot2 Matrix Rglpk]; }; - cat2cat = derive2 { name="cat2cat"; version="0.2.0"; sha256="0rbzzf8yxi3d9c3xx91hhv8y5mmks40gb6azdd9la22gaywc5m75"; depends=[assertthat caret data_table dplyr MASS progress randomForest rlang tidyr]; }; + cat_dt = derive2 { name="cat.dt"; version="0.3.1"; sha256="0qr3azaxs339kfiiyzasc46xz4rb37prdwvdmv0c40cvba6zvapf"; depends=[ggplot2 Matrix Rglpk]; }; + cat2cat = derive2 { name="cat2cat"; version="0.2.1"; sha256="0hjx14g97dsdbk2fzficbinl04n5gs2ccr2c813q6xda28al5bam"; depends=[assertthat caret data_table dplyr MASS progress randomForest rlang tidyr]; }; catIrt = derive2 { name="catIrt"; version="0.5-0"; sha256="09010z1q96nbnpys6mybspaqy57lvgd2cvwgnfijzgx3kl87pwnl"; depends=[numDeriv]; }; catR = derive2 { name="catR"; version="3.16"; sha256="1w39dxfzqk065v64qzmfamx8p1njsv13a461s6clagbqmhysmzbx"; depends=[]; }; catSurv = derive2 { name="catSurv"; version="1.3.0"; sha256="1vj7cw6v94p4ma61wwyxzsh36cj6fp38pqfjmyqr0czwgz04db05"; depends=[BH jsonlite ltm plyr Rcpp RcppArmadillo RcppGSL RcppParallel]; }; - catch = derive2 { name="catch"; version="1.0"; sha256="16gdjrmlsnpyc38fihggj6c7wpgpmf4phcwrimnncdhwlk038yn8"; depends=[MASS Matrix tensr]; }; + catalog = derive2 { name="catalog"; version="0.1.0"; sha256="15bxlwypk0xgf0qggq6jgxa951ipmn61w370f3lcywkvaxw1h4ca"; depends=[dplyr sparklyr]; }; + catch = derive2 { name="catch"; version="1.0.1"; sha256="1a63d1a6pzzirdzswngjj036jmg41hbiadwriws7k05qp95jdh6a"; depends=[MASS Matrix tensr]; }; catchr = derive2 { name="catchr"; version="0.2.3"; sha256="1ix90lqx7m4rx0i6hzj1bph4yg9ch9w8qm3f9yigq1gm74zabzrl"; depends=[purrr rlang]; }; catcont = derive2 { name="catcont"; version="0.5.0"; sha256="0ix6ipm3nn9aq5vxirjga2kwwfnxn4v8ggfjlg5v9027v2r8rb96"; depends=[dplyr]; }; catdap = derive2 { name="catdap"; version="1.3.5"; sha256="0fyhl69z2lznymvpzxra9qvcg85ggzkfjy68c6mzdmf1ja44d2k5"; depends=[]; }; @@ -6330,18 +6567,17 @@ in with self; { catsim = derive2 { name="catsim"; version="0.2.3"; sha256="1gz38xrzbray5ciiimkzdass8bhmiqxh6bcngjm5i8dvafk5gf9g"; depends=[Rcpp testthat]; }; catspec = derive2 { name="catspec"; version="0.97"; sha256="1crry0vg2ijahkq9msbkqknljx6vnx2m88bmy34p9vb170g9dbs1"; depends=[]; }; cattonum = derive2 { name="cattonum"; version="0.0.5"; sha256="11h9nh2i2bmd0b562l5avhwpj9ppnfmzd9nsv94cymhwn5h6nmg6"; depends=[dplyr purrr Rcpp rlang tibble tidyselect]; }; - causact = derive2 { name="causact"; version="0.3.3"; sha256="11dq6bsjbfk4zgipyhgapq2r2akh82nx3qf7wwaa38lbrrcpiy18"; depends=[coda cowplot DiagrammeR dplyr forcats ggplot2 greta htmlwidgets igraph magrittr purrr rlang rstudioapi stringr tidyr]; }; - causalCmprsk = derive2 { name="causalCmprsk"; version="1.0.0"; sha256="025p02fph5zirbccw1nxk29fdx53r5jd9asll7pwfnr45l8549pi"; depends=[data_table doParallel foreach inline purrr survival]; }; + causact = derive2 { name="causact"; version="0.4.0"; sha256="1mghawijsr0rpyy9pzvad11bf4qgfva7rb2pdkidm675a123sgc7"; depends=[coda cowplot DiagrammeR dplyr forcats ggplot2 greta htmlwidgets igraph magrittr purrr rlang rstudioapi stringr tidyr]; }; + causalCmprsk = derive2 { name="causalCmprsk"; version="1.0.1"; sha256="14sv0zimyh7crjc4s87mzkaiqbw3qjw0dcxi8arvx41jnbn4xpfr"; depends=[data_table doParallel foreach inline purrr survival]; }; causaldrf = derive2 { name="causaldrf"; version="0.3"; sha256="16gqx8b8alwm8a4lm69qamnqr3bg2qbz0d6q4lyqyrwsk12grid6"; depends=[mgcv survey]; }; - causaleffect = derive2 { name="causaleffect"; version="1.3.10"; sha256="0z7vdhm9g95s9nkyx4jdzqrap24nb63n8mr23b9gqm6s1m47sc0z"; depends=[ggm igraph XML]; }; + causaleffect = derive2 { name="causaleffect"; version="1.3.12"; sha256="1qbxg3z6bnl0vk9fp832ly6whsh2yay39sq9zgwzgzc280rx9vfh"; depends=[igraph]; }; causaloptim = derive2 { name="causaloptim"; version="0.7.1"; sha256="0i74plwzb69pvrqfwjf7nabvj57bid3ff3gm08hgvfincv1mh6xn"; depends=[igraph Rcpp shiny]; }; causalsens = derive2 { name="causalsens"; version="0.1.2"; sha256="1xy8nybflbw6hymc15mmz27ic6hcq89wryb8q6d4zi216lwv2nww"; depends=[]; }; - causalweight = derive2 { name="causalweight"; version="1.0.0"; sha256="1lbiwmpgs7aqa3z4xz3mfq6pwnxhy264cw0di43sa7b14fprvk20"; depends=[e1071 fastDummies glmnet hdm LARF mvtnorm np ranger SuperLearner xgboost]; }; + causalweight = derive2 { name="causalweight"; version="1.0.1"; sha256="0l23q1ra59afq5737k8gjx8mn69z7q04v9g7n36f7hq1rgzw8ff2"; depends=[e1071 fastDummies glmnet hdm LARF mvtnorm np ranger SuperLearner xgboost]; }; cba = derive2 { name="cba"; version="0.2-21"; sha256="0j2hbp0xlfp28gqgnkcvmb4yp1kc5m2bp5x7pr4m1pz2b1s7h7m6"; depends=[proxy]; }; - cban = derive2 { name="cban"; version="1.0"; sha256="0y0mfb177r9k8j2clyrrs9hjy5kna1z6j23dnb50wkh7jf4496s2"; depends=[]; }; cbanalysis = derive2 { name="cbanalysis"; version="0.2.0"; sha256="0h0h8krlb6rckjpcw0jbbr8pcy3jm0cszimbm56l0ca668kiix06"; depends=[]; }; cbar = derive2 { name="cbar"; version="0.1.3"; sha256="1jy52qnpjvszdd8xviv3vr00ds6bah73q0mhd4kixf68jafnxd35"; depends=[Boom bsts dplyr ggplot2 magrittr]; }; - cbinom = derive2 { name="cbinom"; version="1.5"; sha256="0zhsxhbg9v3p5v21lmj00qaag4j6b5qla9hd86zggsw24x2amg1y"; depends=[Rcpp]; }; + cbinom = derive2 { name="cbinom"; version="1.6"; sha256="1vi2kjlss4fmra1h8r6xgk4y66gzpdp61hcyzby2rqji93sib195"; depends=[Rcpp]; }; cbird = derive2 { name="cbird"; version="1.0"; sha256="0kzylylk46swd7f0j6kjyrcs3plbx9799q9kb8hjxmgh0qcjk2p6"; depends=[]; }; cblasr = derive2 { name="cblasr"; version="1.0.0"; sha256="1bz8d4124qpja4bvzn6k1swi89cfyrcpwg2nwyj4r8y0m1hbpc71"; depends=[Rcpp]; }; cbq = derive2 { name="cbq"; version="0.2.0.2"; sha256="0vg1mhk147pib61v4im3ikc551c2nmmcfah9fjw9c978gf81g32n"; depends=[BH Formula Rcpp RcppEigen rstan rstantools StanHeaders]; }; @@ -6350,24 +6586,29 @@ in with self; { ccChooser = derive2 { name="ccChooser"; version="0.2.6"; sha256="1vgp4zhg46hcf9ma2cmwgnfrqkmq1arh0ahyzjpfk3817vh7disc"; depends=[cluster]; }; ccRemover = derive2 { name="ccRemover"; version="1.0.4"; sha256="1npd0vx2hyg7qbwd650987i49v5cxr6i1hlj5rw6fxc0b808s596"; depends=[]; }; ccaPP = derive2 { name="ccaPP"; version="0.3.3"; sha256="1p08gih67950khfkzhiksa8qw2f9mrmyqiiapsjpv6zc5g0lchhk"; depends=[pcaPP Rcpp RcppArmadillo robustbase]; }; + ccboost = derive2 { name="ccboost"; version="0.1-1.3"; sha256="165v44xghm9xgc9ad5hadvq81mshb3y4rzpi65zc93ggr4jsdfxr"; depends=[mpath xgboost]; }; cccd = derive2 { name="cccd"; version="1.5"; sha256="0m364zsrgr7mh1yhl2lqxpaf71gzq3y3pp9qgnj4spiy4iadyy7i"; depends=[deldir FNN igraph proxy]; }; cccp = derive2 { name="cccp"; version="0.2-7"; sha256="080rr1nsj465458yfawbcfgvdng42gzbzjzblvkdm5c1hkwnn7ij"; depends=[Rcpp RcppArmadillo]; }; - cccrm = derive2 { name="cccrm"; version="2.0.1"; sha256="15v2d4im7ji7pbi94wagg010wdgf4ly24kyczx4akcq3qd4vihff"; depends=[Deriv dplyr nlme tidyselect]; }; + cccrm = derive2 { name="cccrm"; version="2.0.3"; sha256="0kp0i83xm4i4fwkkizacpdgdjsg9p9gr1q7ibdsgy8qwdm50sz9z"; depends=[Deriv dplyr nlme tidyselect]; }; ccda = derive2 { name="ccda"; version="1.1.1"; sha256="1kka4vmhpcnl4skdmijzsxrfj6dgax6hhlxvp7gkqlfaazq8pzf0"; depends=[MASS]; }; ccdrAlgorithm = derive2 { name="ccdrAlgorithm"; version="0.0.5"; sha256="171k70p4qyasr385ma3cvcga2b4nbz2dfry78wqx5yb1aa6wwcyc"; depends=[Rcpp sparsebnUtils]; }; cchs = derive2 { name="cchs"; version="0.4.2"; sha256="18zk50g7rw8cb09fczpcdgzjl1b06rgf6lwy99sg7nq4scnzgzm8"; depends=[survival]; }; - cchsflow = derive2 { name="cchsflow"; version="1.6.0"; sha256="0fj27d4hz4yrs7crqi1zbn7xwbibkjr1nr6srj1zy8lkl7rhicy2"; depends=[dplyr haven magrittr sjlabelled stringr]; }; + cchsflow = derive2 { name="cchsflow"; version="1.8.0"; sha256="1i1rvl70dr759zjxvvninlh0awgxqajky875pyamdzc9zna1wb9r"; depends=[dplyr haven magrittr sjlabelled stringr]; }; + ccid = derive2 { name="ccid"; version="1.0.0"; sha256="1wzz8bydcy9x7rnrvvircd8lkrgx0p7x2q5hihxslz3siy1jjgaj"; depends=[gdata GeneNet hdbinseg IDetect]; }; cclust = derive2 { name="cclust"; version="0.6-22"; sha256="1wyiwq16zyvc0vqbap1y4zfkvlgzwzjrx4vmrjhzlqxci8jryjbs"; depends=[]; }; + ccmReportR = derive2 { name="ccmReportR"; version="0.1.0"; sha256="0jxxz26f0azp9xafqilvbbfhzn4ys8q4pf4c8bbnmwwbckmjajxm"; depends=[dplyr httr jsonlite keyring lubridate purrr rlang tibble]; }; ccmm = derive2 { name="ccmm"; version="1.0"; sha256="0855nr74xxpy7in2vrw15g8pv7nm1374irc1c5hikr5hadk5pf8v"; depends=[MASS]; }; + ccoptimalmatch = derive2 { name="ccoptimalmatch"; version="0.1.0"; sha256="0a5a036iahzag5rwcrjnf7xvvyfgjcx4xdsy1xzrxxndvkjifwqw"; depends=[dplyr rlang]; }; ccostr = derive2 { name="ccostr"; version="0.1.0"; sha256="0yfmj8v7ip595v87w9dmlzl5rih2j0lsapswh9b9vvc20wnk48ld"; depends=[data_table dplyr forcats ggplot2 knitr msm Rdpack rlang survival tibble]; }; ccrs = derive2 { name="ccrs"; version="0.1.0"; sha256="1nyw4ip9v7y6yfbfdz3bwhy4r6hpp1hiip3ycldxlkl9wrxkxgrw"; depends=[cds colorspace dplyr limSolve lsbclust msm]; }; + ccrtm = derive2 { name="ccrtm"; version="0.1.6"; sha256="1r2jmqb8wwmxr13xgzi5qfig96pclm0nmxm0glvwg0i72hvvqlbv"; depends=[expint pracma Rcpp testthat]; }; ccss = derive2 { name="ccss"; version="1.0"; sha256="0m2facn6kwxrjxg9a8z0pjnhp0rkgw6nxj6sac93ig24zygx4380"; depends=[]; }; cctools = derive2 { name="cctools"; version="0.1.2"; sha256="03lp9pa9qr2hi584ivvmswxmwjw1c3a6xqladpqldjhzvzpxvcwi"; depends=[qrng Rcpp RcppArmadillo]; }; cd = derive2 { name="cd"; version="0.1.0"; sha256="1zzhkrsidny5h6jvbip2a4i4klqdgw7s1w8h8hkc3mpbxjfr615r"; depends=[]; }; cdata = derive2 { name="cdata"; version="1.1.9"; sha256="1hnc74psz6940v0yqw7zrp9a75g0bmq5a0qfpddxkcij3vm6qiya"; depends=[rqdatatable rquery wrapr]; }; cdb = derive2 { name="cdb"; version="0.0.1"; sha256="1rdb4lacjcw67apdyiv7cl1xvv9d1mrzck1qk605n6794k7wf2ys"; depends=[bitops]; }; cdcatR = derive2 { name="cdcatR"; version="1.0.2"; sha256="12xrk4v8rlqkndw3pdzvzv7qi86y2xvvsnh36nmpib4qdf6b2jry"; depends=[cowplot doSNOW foreach GDINA ggplot2 NPCD]; }; - cdcfluview = derive2 { name="cdcfluview"; version="0.9.2"; sha256="05ah96blwkgdzayi7ay14vy9va0y4lxarxapnvw420jy1k40y27j"; depends=[dplyr httr jsonlite MMWRweek progress purrr readr sf tibble units xml2]; }; + cdcfluview = derive2 { name="cdcfluview"; version="0.9.3"; sha256="05ay1qgf54nh99blwrhi209mg854y6553h6112l2vkydn2vis1ff"; depends=[dplyr httr jsonlite MMWRweek progress purrr readr sf tibble units xml2]; }; cdcsis = derive2 { name="cdcsis"; version="2.0.3"; sha256="0hv52valyig3zzywm3058c5nxb2n7y3j2vfibxdbfg8414wwapd9"; depends=[ks mvtnorm Rcpp]; }; cder = derive2 { name="cder"; version="0.2-2"; sha256="0aw2c170sqx2y4iz16avqijahwxlsaz590mxvsx4bicfd8nrcynk"; depends=[curl dplyr glue lubridate readr rlang stringr tibble]; }; cdfquantreg = derive2 { name="cdfquantreg"; version="1.2.2"; sha256="094mk2hvxww2lndx5wkw368ynqx6klbdwl30d1yv7kqmr2yy7388"; depends=[Formula MASS pracma]; }; @@ -6378,12 +6619,13 @@ in with self; { cds = derive2 { name="cds"; version="1.0.3"; sha256="1h34k96h7ajkaqsw4dlqri63hrbnshaqwrdl74wlgycdlbvrqj05"; depends=[clue colorspace copula limSolve MASS]; }; ceRtainty = derive2 { name="ceRtainty"; version="1.0.0"; sha256="01wgvjpxqwhgh6vx9vbmiv4d88bps790l6ij3gw5w69hbrrd9ixi"; depends=[dplyr RColorBrewer tidyr]; }; cec2013 = derive2 { name="cec2013"; version="0.1-5"; sha256="07i2vp1x3qaw5di5vr5z70d47hh9174pjckjlhgv0f2w97slwc1i"; depends=[]; }; + cecs = derive2 { name="cecs"; version="0.2.0"; sha256="0s5lwlxgky9cldfi6qfxvszsfcmm2rs8ibszdv4y9fixvyl6r1r8"; depends=[cec2013 stringr]; }; ced = derive2 { name="ced"; version="1.0.1"; sha256="0xrf3y1cr4dylhh2xr1gggnwdwn7riz37g6yw55hyryg03hxkms6"; depends=[Rcpp]; }; ceg = derive2 { name="ceg"; version="0.1.0"; sha256="01la7kv0a3inc9vy5x010ysicfiv404bqfgs8csvqixviap9rd74"; depends=[graph Rgraphviz]; }; celestial = derive2 { name="celestial"; version="1.4.6"; sha256="1gls0qvr8mxz79lsmk76v253f747g0cqys8p8wjmpijs8r0pyr4z"; depends=[NISTunits pracma RANN]; }; cellOrigins = derive2 { name="cellOrigins"; version="0.1.3"; sha256="0nxhyz9bz0f598wpr10hm1d0zx83450xf9jkrl279v46x8sx36n4"; depends=[iterpc]; }; cellVolumeDist = derive2 { name="cellVolumeDist"; version="1.3"; sha256="00hq3nbfbnmg2lhrqd0glkh5ld50fv54ll3q6v875d1lgs44sln1"; depends=[gplots minpack_lm]; }; - cellWise = derive2 { name="cellWise"; version="2.2.3"; sha256="0b9m98mdp2zv4qzdh8l2bj4ipgbbg70k1rid272fvywh9xv2vvzc"; depends=[ggplot2 gridExtra matrixStats Rcpp RcppArmadillo reshape2 robustbase rrcov scales svd]; }; + cellWise = derive2 { name="cellWise"; version="2.2.5"; sha256="0w0n5l1icyjrz7hk61zmdphx48w6d1ldn8h9br4g6k85m4zq57h6"; depends=[ggplot2 gridExtra matrixStats Rcpp RcppArmadillo reshape2 robustbase rrcov scales svd]; }; cellranger = derive2 { name="cellranger"; version="1.1.0"; sha256="16fgi3annn34c3cxi0pxf62mmmmxi21hp0zzlv7bkfsjqy4g4f2x"; depends=[rematch tibble]; }; celltrackR = derive2 { name="celltrackR"; version="0.3.1"; sha256="1mnqaklc3rkx5mm41n99ky11bjs4l0dppapkwfvkyg3a0h0xzsbb"; depends=[ellipse]; }; cem = derive2 { name="cem"; version="1.1.27"; sha256="096ilbrkxjsbyf3pk126y2dqc3hzbnfpagr96byagap01q24pyij"; depends=[combinat lattice MatchIt nlme randomForest]; }; @@ -6393,12 +6635,12 @@ in with self; { censCov = derive2 { name="censCov"; version="1.0-0"; sha256="0i9vmyi12f1m5xnrl4cxk3z9qv7ymzxsyf4gbnpg1ph63yfnhv3g"; depends=[survival]; }; censNID = derive2 { name="censNID"; version="0-0-1"; sha256="1ij5ci6nkqf0rq51vyh4jw5sr3y46yndfkjmwl78ppdj66axxir5"; depends=[]; }; censReg = derive2 { name="censReg"; version="0.5-32"; sha256="044f3a1vkr318drcipv9zz5qsx85ld95x7fsy0w6cpc6zlkwxsyb"; depends=[glmmML maxLik miscTools plm sandwich]; }; - censo2017 = derive2 { name="censo2017"; version="0.2"; sha256="1w09jlpy2zaqpn6ddny9sm7a5v2fjlis3d4lvnky0hx7x9w1wjw0"; depends=[cli crayon DBI httr purrr R_utils rappdirs RSQLite rstudioapi sf tibble]; }; + censo2017 = derive2 { name="censo2017"; version="0.4"; sha256="00dzdk47rrs41sa7mx6sl8pk8rnny22wr8i0b5yyaydp16b2bd0r"; depends=[cli crayon DBI duckdb httr purrr rstudioapi tibble]; }; censorcopula = derive2 { name="censorcopula"; version="2.0"; sha256="16pk4xlpliif02qznrhvl8qmrr6k4kknygqxcm83nsjxy6dcyga8"; depends=[copula]; }; censusGeography = derive2 { name="censusGeography"; version="0.1.0"; sha256="1ncgd05ml571g3vy1g4p5xxg2bm08hbb6d5r3hpz7frn7w3l8l1d"; depends=[qdapTools]; }; censusapi = derive2 { name="censusapi"; version="0.7.1"; sha256="1vvvbig4q9ix8qdl67y2chya2qimaawanh7vznylj1x7is0j49ia"; depends=[httr jsonlite]; }; censusr = derive2 { name="censusr"; version="0.0.4"; sha256="1n9571fyr46wj1dcxc2xgns9865655yzlq7yfz8im014wh0ycwqc"; depends=[dplyr httr stringr]; }; - censusxy = derive2 { name="censusxy"; version="1.0.0"; sha256="0wvr109hv2injkg2kh6n82wik6pd25m4jx3yiqpy07dmh6ddd5xp"; depends=[httr]; }; + censusxy = derive2 { name="censusxy"; version="1.0.1"; sha256="0vv7b59ckfygv72jdap10jxnrcifspc7qwnwiywygqk3x4bd1ain"; depends=[httr]; }; censys = derive2 { name="censys"; version="0.1.0"; sha256="0r0yvaidn0qn96hx461415hywsjfgaz9wvvdssx7w97v2ndnk9sy"; depends=[httr jsonlite purrr stringi]; }; centiserve = derive2 { name="centiserve"; version="1.0.0"; sha256="1m6gqz2rk7023340laa5pc0ncbfka2qi9ajvh65fwijd7xvv3n5c"; depends=[igraph Matrix]; }; centralplot = derive2 { name="centralplot"; version="0.1.0"; sha256="1slzvbm1vvgj1gkcx9pb46fz8q55vfyqrxsvx4qzi5kp7d9h4dy2"; depends=[ggplot2]; }; @@ -6406,40 +6648,44 @@ in with self; { cepR = derive2 { name="cepR"; version="0.1.2"; sha256="02dj6vyfgc0lsgclbsmzpms1hnnwb3yjdayim7b7vpciym2c8ww3"; depends=[dplyr httr magrittr purrr tibble]; }; cepiigeodist = derive2 { name="cepiigeodist"; version="0.1"; sha256="0i1i8hyl4bkcyxrrfqs3m9yny33w0i33409f4kx83wfnablc54sv"; depends=[]; }; cepp = derive2 { name="cepp"; version="1.7"; sha256="01hvm6586xnb1crvk7brqh3dm2j44ia5lrl5swnf6pb682yskbq0"; depends=[randtoolbox trust]; }; - cepreader = derive2 { name="cepreader"; version="1.1-3"; sha256="0jqmz3gm6fprfjjzw22qdk055csvy1np7vm0mjjsnpim7js5xvc2"; depends=[]; }; + cepreader = derive2 { name="cepreader"; version="1.2-0"; sha256="0ip1xxs0frcg08fnfxsxr39ldqgb2hmdrzh1lzdrbmr5ja4igf0x"; depends=[Matrix]; }; ceramic = derive2 { name="ceramic"; version="0.6.0"; sha256="0n0l1b7gb05kqjrh696faq868q3nbwlg34y6wgr0w205kdq6qs17"; depends=[curl dplyr fs glue jpeg magrittr png purrr rappdirs raster reproj rlang slippymath sp spex tibble]; }; cernn = derive2 { name="cernn"; version="0.1"; sha256="0gz2x20pgsiq85hwkkpg4s1cdlw9plygx0446djc7qsymp469p2w"; depends=[]; }; ceser = derive2 { name="ceser"; version="1.0.0"; sha256="1k2k2gykyajlahl7xvpxdla0ghapdxl24yi575pgq2421fpxq2i4"; depends=[dplyr lmtest magrittr purrr tibble]; }; cetcolor = derive2 { name="cetcolor"; version="0.2.0"; sha256="0kygdcr9ldanr0z4qpygwh0padki7s2ad0j6myky601g4228z79q"; depends=[]; }; ceterisParibus = derive2 { name="ceterisParibus"; version="0.4.2"; sha256="0hxklydsqb69y5sv2hanp5ja9k0063swf5si1j6gcj15lp7phpif"; depends=[DALEX ggplot2 gower knitr]; }; cfa = derive2 { name="cfa"; version="0.10-0"; sha256="12z58y4ls9m58wpj1xa4ir2p2apzxaskps05sxy2946m24i71zfk"; depends=[]; }; - cfdecomp = derive2 { name="cfdecomp"; version="0.2.0"; sha256="04cbdpp1smbby5nkxa8slaxj970zcqrzy32qq9siz9gq4cs46vr6"; depends=[]; }; + cfda = derive2 { name="cfda"; version="0.9.9"; sha256="07k531vp2chsrkw5d0iws3jg23yz0gni0bjn03kr6irw89r4py9p"; depends=[diagram fda ggplot2 mgcv msm pbapply]; }; + cfdecomp = derive2 { name="cfdecomp"; version="0.3.0"; sha256="12pckaf7pqpx4a4a7xc0gy0hcvafbgzrnw6ia45gnivmpa165jli"; depends=[]; }; cffdrs = derive2 { name="cffdrs"; version="1.8.18"; sha256="15bl1sfm2yz897b5w0x0kvyf2z3rx32n436gsnsx5gd32v5v18w1"; depends=[data_table doParallel foreach geosphere raster rgdal]; }; cfma = derive2 { name="cfma"; version="1.0"; sha256="006z5g3rqpg44jqdf6ivyxr47sxm5cd9cqhayfi8qk73xx5w4lv9"; depends=[]; }; cfmortality = derive2 { name="cfmortality"; version="0.3.0"; sha256="0dgwv89fzylznc6jr41ixzfs1gfs3np4gf46bk6pcd09l1kbx3lc"; depends=[]; }; + cforward = derive2 { name="cforward"; version="0.1.0"; sha256="1vhac0669f20ckx7qi5v8rnbmscb87gw8rfn555xazdfbvri6m0w"; depends=[dplyr magrittr survival tibble]; }; cg = derive2 { name="cg"; version="1.0-3"; sha256="1kbyal1sicbr10yvxpwgcij710kqpi23vmndp9kyfzn3k8zfird3"; depends=[Hmisc lattice MASS multcomp nlme rms survival VGAM]; }; cgAUC = derive2 { name="cgAUC"; version="1.2.1"; sha256="172f9rkfhv4xzwpw8izsnsdbcw9p3hvxhh0fd8hzlkil7vskr3k8"; depends=[Rcpp]; }; cgal4h = derive2 { name="cgal4h"; version="0.1.0"; sha256="0ghcwjfqlhqysnl8mgz6zp7dyqh8pvnpvphwjwk6zqi24n3nhac2"; depends=[]; }; cgam = derive2 { name="cgam"; version="1.16"; sha256="02kbn44jv455vn5f64dsa739y5262xkb34i6azyrib2gg3dhvq8j"; depends=[coneproj lme4 Matrix svDialogs]; }; cgdsr = derive2 { name="cgdsr"; version="1.3.0"; sha256="07yc819hkabpzzh0g0cbqza6bcfy67b2marrzz1lj97f9iba78ja"; depends=[httr R_methodsS3 R_oo]; }; cghRA = derive2 { name="cghRA"; version="1.6.0"; sha256="16dlw27s8wckc75xcwc2g74pw6bar0y0ii3h53w1hql05d4f7sb8"; depends=[DNAcopy Rgb]; }; - cglasso = derive2 { name="cglasso"; version="1.1.2"; sha256="1z7scwbcn63iah9aih565rd4lyi6n2y5k2593w885dh1n6j5ss0i"; depends=[igraph MASS]; }; + cglasso = derive2 { name="cglasso"; version="2.0.4"; sha256="0rdxmvndq97jj18sxabb5ggfqkdjbrgzsi4byw7w3jns9w61wbvz"; depends=[igraph MASS]; }; cglm = derive2 { name="cglm"; version="1.1"; sha256="1r3wrds5lbirzzqsi12prwykxa5361jb95pq7j95nlp6y8kcb94j"; depends=[data_table nleqslv Rcpp RcppArmadillo]; }; - cgmanalysis = derive2 { name="cgmanalysis"; version="2.7"; sha256="0gwlkk0s3xvzy1kgl0hn163rg387y592h6p3f9bgmc24mznwadd4"; depends=[ggplot2 lubridate pastecs pracma readr readxl XML zoo]; }; + cgmanalysis = derive2 { name="cgmanalysis"; version="2.7.1"; sha256="1ji1hzk7mvy77vcm9cwin7mqymmr006v3dn40rpjdp5jp2nyvrq0"; depends=[ggplot2 lubridate pastecs pracma readr readxl XML zoo]; }; + cgmquantify = derive2 { name="cgmquantify"; version="0.1.0"; sha256="11pw1layzx9a8qy7n06nyc59mi5r07krhxw6hhybbqkdglzp511w"; depends=[dplyr ggplot2 hms magrittr tidyverse]; }; cgraph = derive2 { name="cgraph"; version="6.0.1"; sha256="0hmp07iz7ya3j8jaghm4pa0b84lsinc48rsibbh47sd3i6pkxfik"; depends=[]; }; - cgwtools = derive2 { name="cgwtools"; version="3.2"; sha256="003d9yw8d0as15glshvx1vsiqz91r5xkhy8ryhxk28hlpwfvp160"; depends=[]; }; + cgwtools = derive2 { name="cgwtools"; version="3.3"; sha256="1dl9ghwfzjrl5pd6izy4c5qyfq2s8ywnqh97y1bhwmcw2qwb4ci6"; depends=[gmp]; }; chandwich = derive2 { name="chandwich"; version="1.1.3"; sha256="00lry1y4m1m1q5wrcscxcg9k6caznl58nznzn7n7njp6n1xzmwdw"; depends=[numDeriv]; }; changedetection = derive2 { name="changedetection"; version="0.2.0"; sha256="0j8x7qyna7qgjhx56yxav1g3wj3r47zvx2hivybsjis2gqbl82hr"; depends=[glmnet L1pack Rdpack]; }; changepoint = derive2 { name="changepoint"; version="2.2.2"; sha256="1jbki95pck10phpxna0b4i79hhl912zqi5ii9mjqb673y64dszkj"; depends=[zoo]; }; changepoint_geo = derive2 { name="changepoint.geo"; version="1.0.1"; sha256="1jlixdrq97n6bh09jq3hamlwkqfqbmqs14kr8swx20f8fvfr3fj2"; depends=[changepoint changepoint_np ggplot2 Rdpack]; }; changepoint_mv = derive2 { name="changepoint.mv"; version="1.0.2"; sha256="0bji0m4ks2lf9s1rnq58w97ywpgs3m9rpm5p5f70f0kn33yffrix"; depends=[assertive ggplot2 Rcpp Rdpack reshape2 tbart zoo]; }; - changepoint_np = derive2 { name="changepoint.np"; version="1.0.2"; sha256="10a1bg9q4phdkc2bs6mav7wzmv3jgmqvpdknx48kqxvgmrln5q3z"; depends=[changepoint Rdpack zoo]; }; + changepoint_np = derive2 { name="changepoint.np"; version="1.0.3"; sha256="04i7bgbsr06iryfm5r0f9ddja0d6zlabjf1pdpic2bpqssdjndbv"; depends=[changepoint Rdpack zoo]; }; changepointsHD = derive2 { name="changepointsHD"; version="0.3.3"; sha256="1wdhmkg21kb5jd95a0aqqp2qgdkndc69rbdxjf792gq8f1rigarh"; depends=[Rcpp RcppArmadillo]; }; changepointsVar = derive2 { name="changepointsVar"; version="0.1.0"; sha256="0kj9m9jik1dm5fx4c4hb559f5irpl1mvxk4wwajd5577a2fdqxb5"; depends=[lars MASS]; }; changer = derive2 { name="changer"; version="0.0.3"; sha256="1pmnspadkshz7z9f275vks1xjh6a9k37h7j51dqdjrqilzq7y6sf"; depends=[available devtools git2r]; }; charlatan = derive2 { name="charlatan"; version="0.4.0"; sha256="0hrc4kdympi05j6gx0x6vy4jb1mvxxi7pcrnpzcp8vxvd6r3wjmq"; depends=[R6 tibble whisker]; }; chartql = derive2 { name="chartql"; version="0.1.0"; sha256="108csn7q8qrjhiss54f5bliv3av7psq7kfryspajbdb6wm9ciz3p"; depends=[ggplot2 stringr]; }; cheatR = derive2 { name="cheatR"; version="1.2.1"; sha256="0ph7bw2b3frmq6z7qb99pds8j81dbx0bxkbhb55mczqa7n0k50hy"; depends=[ngram purrr R_utils textreadr]; }; + cheatsheet = derive2 { name="cheatsheet"; version="0.1.0"; sha256="1vnkpmf2iahgj1j6f5jvjiamvsgsamy4kdnskc70s4584d5m00p7"; depends=[cli crayon fs git2r magrittr purrr rappdirs rstudioapi stringr]; }; cheb = derive2 { name="cheb"; version="0.3"; sha256="0vqkdx7i40w493vr7xywjypr398rjzdk5g410m1yi95cy1nk4mc7"; depends=[]; }; chebpol = derive2 { name="chebpol"; version="2.1-2"; sha256="126cgqnl9jy332q0ywg9dr11d4q1aichwwakb1xcrxrqw2j26zzi"; depends=[geometry]; }; checkLuhn = derive2 { name="checkLuhn"; version="1.1.0"; sha256="1s1ix5n98bcbzcvrz5h19sk9pchdvrhpy3ppmw96ys8vylzm58mv"; depends=[dplyr stringr]; }; @@ -6450,30 +6696,32 @@ in with self; { checkr = derive2 { name="checkr"; version="0.5.0"; sha256="14hkpfbw5ibdwz2jygir2f2bb2qgrj62gn3449n4dif31nswaj2f"; depends=[err]; }; cheddar = derive2 { name="cheddar"; version="0.1-636"; sha256="1lf39v0p583jgiyb02vx0rgbwzmmhgkfpwjib2fzh9ffbs8bfk66"; depends=[]; }; cheese = derive2 { name="cheese"; version="0.1.1"; sha256="1r4n9li33am0bsyl57kzg1m9g4w0pzbw6garcdp3qk7lwqxy2y26"; depends=[dplyr forcats kableExtra knitr magrittr purrr rlang stringr tibble tidyr tidyselect]; }; - chemCal = derive2 { name="chemCal"; version="0.2.1"; sha256="1kq82x57qm68im6lyqjqmh4p34s4y7fn5v6ymclxjr47mdv8npb5"; depends=[]; }; + chemCal = derive2 { name="chemCal"; version="0.2.2"; sha256="1g0wvw929s3m9ga8n5rn1xfknjpfidyz63q9ypva81057jc5iakk"; depends=[]; }; chemmodlab = derive2 { name="chemmodlab"; version="1.1.0"; sha256="0b7qwysqzvhhyxdvvr6lb65aqwhrh1a2wk3p5xplnfjxpy9gh7lm"; depends=[caret class e1071 elasticnet fingerprint lars MASS MSQC nnet pls pROC randomForest rcdk rpart tree]; }; chemometrics = derive2 { name="chemometrics"; version="1.4.2"; sha256="0shqns0n964pfwnd0q5sadglrlpgs4g5fbv45fsj9p37l4pq61dp"; depends=[class e1071 lars MASS mclust nnet pcaPP pls robustbase rpart som]; }; cherry = derive2 { name="cherry"; version="0.6-13"; sha256="1bpahdymkc2w6mc5pjyq4q59iwzskw37swx3sw4rnbmnhzhwaf8n"; depends=[bitops hommel lpSolve Matrix]; }; cherryblossom = derive2 { name="cherryblossom"; version="0.1.0"; sha256="1fn0xi65y0w1gmyrjlh8lb2is34r2dc5bym0ynrgjv8h595nzhwp"; depends=[]; }; chess = derive2 { name="chess"; version="1.0.1"; sha256="0b0lz8r48bvksjnh385p1ni22hw1yvs6255pjbpj49ga9dwziin0"; depends=[cli magrittr purrr reticulate rsvg]; }; - chest = derive2 { name="chest"; version="0.3.4"; sha256="1mkds228d00anmx35120gdkl5wxx1mfbfys41gzsm202z1mp05bj"; depends=[broom dplyr forestplot ggplot2 MASS speedglm survival tibble]; }; + chest = derive2 { name="chest"; version="0.3.5"; sha256="0jmihq8p6gxyxgmpdgwmnhl98s38pqzdzdqzqiy54zyqgd69plh8"; depends=[broom dplyr forestplot generics ggplot2 MASS speedglm survival tibble]; }; chi = derive2 { name="chi"; version="0.1"; sha256="1y91mwahj4j2wz0y5k5vdpq7ygq834h8jkn37n74lqnwvv1968rr"; depends=[]; }; chi2x3way = derive2 { name="chi2x3way"; version="1.1"; sha256="13qc8sigiw4gcxk8y50q7yfgzbssjyl41fizzjqzcp3p14kpsmzw"; depends=[]; }; - chicane = derive2 { name="chicane"; version="0.1.2"; sha256="080saqwhw54g9frrqr2z8s55d9asq3xjfy95w4y4npvd16a79nil"; depends=[bedr data_table doParallel foreach gamlss gamlss_tr iterators knitr MASS rmarkdown]; }; + chicane = derive2 { name="chicane"; version="0.1.4"; sha256="1p7arlidwlxndif7a6p2p835zgm6f4n2zxyab1v9m6qrafl584h4"; depends=[bedr data_table doParallel foreach gamlss gamlss_tr iterators knitr MASS rmarkdown]; }; chickn = derive2 { name="chickn"; version="1.2.3"; sha256="1d3xl2pigan6vb29nk2ks04dsl5vy16cv9z7miskmhcqcx2wm1qb"; depends=[bigstatsr doParallel doRNG foreach MASS mvnfast nloptr pracma Rcpp RcppArmadillo RcppParallel Rdpack rmio zipfR]; }; + childdevdata = derive2 { name="childdevdata"; version="1.1.0"; sha256="016x6xhqq1mfqlj9m5qv63k639xnqnrf5h6rdcyaa8sxn7nv34zm"; depends=[]; }; childesr = derive2 { name="childesr"; version="0.2.1"; sha256="0dy2qkxyc1hl2v3ssvq7vynj2k7h1lky0ig7ph42pqsjqwfpk06d"; depends=[DBI dbplyr dplyr jsonlite magrittr purrr RMySQL]; }; childhoodmortality = derive2 { name="childhoodmortality"; version="0.3.0"; sha256="1ixd10jyzgr1ssnjas35kngpsqyjzl73wwpvcspv06cn12sv2b8d"; depends=[dplyr matrixStats plyr]; }; childsds = derive2 { name="childsds"; version="0.7.6"; sha256="1h3p80byfma8zhivlq9jmdszm793chggnhb93qjnbl3vmnmnxgg7"; depends=[boot class dplyr gamlss gamlss_dist magrittr purrr purrrlyr reshape2 tibble tidyr VGAM]; }; chilemapas = derive2 { name="chilemapas"; version="0.2"; sha256="0s2f5bhr7d64rlk4x7cv6zjrbnf5g86lgg026svgrdxvs1vqa4as"; depends=[dplyr magrittr rlang rmapshaper sf stringr]; }; - chillR = derive2 { name="chillR"; version="0.72"; sha256="1qa01zsm1xvdd41dd317ng8xj4wzmbdmay4zdzz49xzi95y6vy5n"; depends=[assertthat dplyr fields GenSA ggplot2 httr jsonlite Kendall pls plyr R_utils raster Rcpp RCurl readxl reshape2 rlang RMAWGEN sp XML]; }; + chillR = derive2 { name="chillR"; version="0.72.2"; sha256="0hdgh8q37vqkmfk26hyxxwhxd891xwjgxblq6l8178rwlm3hs2bm"; depends=[assertthat dplyr fields GenSA ggplot2 httr jsonlite Kendall pls plyr R_utils raster Rcpp RCurl readxl reshape2 rlang RMAWGEN sp XML]; }; chinese_misc = derive2 { name="chinese.misc"; version="0.2.3"; sha256="0hlna52g00nh3908wgpb9ldgghff3gfjx24vmk5gikkazdqk9zrh"; depends=[jiebaR Matrix NLP purrr slam stringi tm]; }; + chipPCR = derive2 { name="chipPCR"; version="1.0-2"; sha256="0q30ncnvbipvqbpxrx2yb68i2ybdfl1fbzj3f12dd2wmjjl72q1x"; depends=[lmtest MASS outliers ptw quantreg Rfit robustbase shiny signal]; }; chirps = derive2 { name="chirps"; version="0.1.2"; sha256="0lvrlpsvncyyzli84ivzmknk0g5g3lhciwl35wmrgyxf08bs4bqb"; depends=[crul jsonlite sf]; }; chisq_posthoc_test = derive2 { name="chisq.posthoc.test"; version="0.1.2"; sha256="0lvj3jqhaj1ijjpzvpq3fn3a1y3fgv69pxh91j6k958pn6vmp40i"; depends=[]; }; chk = derive2 { name="chk"; version="0.5.1"; sha256="09qw8i97mbfgymx5nf6iw4s46hqyaa7434y3bwkzmqjh9f18xfmh"; depends=[lifecycle rlang]; }; - chlorpromazineR = derive2 { name="chlorpromazineR"; version="0.1.2"; sha256="0zg3xjq67na98n4amsm5v4cn9ba1k7c0lb7k2lvxa3n1w7rndpw3"; depends=[]; }; + chlorpromazineR = derive2 { name="chlorpromazineR"; version="0.2.0"; sha256="0w7v6xk3vyf9dyf9bh5v9516v78yhcdvy7h1140pg2yw8xmfyr0r"; depends=[]; }; chngpt = derive2 { name="chngpt"; version="2020.10-12"; sha256="0i8vzqycqd6sinnpb8f88b7pv76d54x09l3iw2s8c6hs46rybqch"; depends=[boot kyotil lme4 MASS survival]; }; choiceDes = derive2 { name="choiceDes"; version="0.9-3"; sha256="1nsc8p4svfc6z7ckffl24c0acnaxi6cnpz7jq03vzn6spxvpjcmw"; depends=[AlgDesign]; }; - cholera = derive2 { name="cholera"; version="0.7.0"; sha256="0ja013k431vd0sjy74y2mlrii46rbwb5x886jaza4ihb48mgz7ah"; depends=[deldir ggplot2 HistData igraph KernSmooth pracma RColorBrewer sp threejs TSP]; }; + cholera = derive2 { name="cholera"; version="0.7.5"; sha256="1r9dfmx7w3g7qicfaz81j4rprf5svckf6qnkjdmmm6p6086cl93k"; depends=[deldir ggplot2 HistData igraph KernSmooth pracma RColorBrewer sp threejs TSP viridisLite]; }; choplump = derive2 { name="choplump"; version="1.0-0.4"; sha256="0fn6m3n81jb7wjdji4v04m53gakjfsj3ksm546xxz5zm7prk237s"; depends=[]; }; chopthin = derive2 { name="chopthin"; version="0.2.2"; sha256="1ixmgq6igd2ji88qba7scny1j8rrizcf76dk4ymk3hah5dln97fz"; depends=[Rcpp]; }; chords = derive2 { name="chords"; version="0.95.4"; sha256="1v6zvl1mv9fyf6hx1fpbj3i7s893n4y1w4j9rw1arps006qz2jqn"; depends=[MASS Matrix]; }; @@ -6483,50 +6731,57 @@ in with self; { chorrrds = derive2 { name="chorrrds"; version="0.1.9.5"; sha256="045m3hqfk63zlb44s07wflaawzn030fg0nqck4w852m52a0r1z5v"; depends=[dplyr forcats magrittr purrr rlang rvest stringr xml2]; }; christmas = derive2 { name="christmas"; version="1.0.0"; sha256="06a2r56vh7m6j0kfbf3b3aapn52x693fzdn29sxfvyackdk5dhj3"; depends=[animation]; }; chromer = derive2 { name="chromer"; version="0.1"; sha256="0fzl2ahvzyylrh4247w9yjmwib42q96iyhdlldchj97sld66c817"; depends=[data_table dplyr httr]; }; - chromoMap = derive2 { name="chromoMap"; version="0.2"; sha256="1ljjwkv7rdy1mcrkb8dd5lfkg54gxzclsjvla4qnc8j5hmfp0p8g"; depends=[htmltools htmlwidgets]; }; + chromoMap = derive2 { name="chromoMap"; version="0.3.1"; sha256="06iy8rip99bsw5vadf6f7gpxarj4hs2japjq39zgzws8rrzvqccm"; depends=[htmltools htmlwidgets]; }; chromseq = derive2 { name="chromseq"; version="0.1.3"; sha256="0m9dnm50iw176ffn6syd3538hxmjhkrxfzaf13210q100wk0lgz2"; depends=[]; }; chron = derive2 { name="chron"; version="2.3-56"; sha256="0p9zz96jfyf139924hdwkzhr8knkjvx6547ac53rknm3a6wwngl6"; depends=[]; }; - chronosphere = derive2 { name="chronosphere"; version="0.4.0"; sha256="034845mvh873db3i8hm7kz05c1n30gp5m4acjryb80303086k3ih"; depends=[raster sp]; }; + chronicle = derive2 { name="chronicle"; version="0.2.5"; sha256="0489fh393pfvxnfb6lflrmypvrsr9i6r4lfgp8rapnkl757n00d8"; depends=[data_table DT dygraphs ggplot2 glue knitr magrittr plotly prettydoc purrr readr rlang rmarkdown rmdformats scales skimr viridis zoo]; }; + chronosphere = derive2 { name="chronosphere"; version="0.4.1"; sha256="1x4w4kap7cwkmrq4v6bvhlzm299i8chh4k02873ipnnqrhjxdhka"; depends=[raster sp]; }; chunkR = derive2 { name="chunkR"; version="1.1.1"; sha256="1kw3hsx5k4cdicx0hc1v0mf2nzvqg95shx2xv05vb2pass48qw48"; depends=[Rcpp]; }; chunked = derive2 { name="chunked"; version="0.5.1"; sha256="08gw05bng4p35kfd9zcxz1l73jhlxlymw55vrsl6f2771l1r4bz5"; depends=[DBI dplyr LaF progress rlang]; }; chunkhooks = derive2 { name="chunkhooks"; version="0.0.1"; sha256="1kps7widb9ql01njy8xl03lplrybl2ci5fvx5vzzwnwps6s4y3fm"; depends=[knitr measurements prettyunits]; }; ciTools = derive2 { name="ciTools"; version="0.6.1"; sha256="0d6aq4wcxi1q59g4kfx49x1li41rfwx2z2v4xzz2xkldn6h1794z"; depends=[arm boot dplyr lme4 MASS survival]; }; ciccr = derive2 { name="ciccr"; version="0.2.0"; sha256="0xmjqwlw2xq332pyagrn8ay6ipyvmxw1q7zf4cza4ly2mz9mf1ws"; depends=[]; }; - cicerone = derive2 { name="cicerone"; version="1.0.3"; sha256="01swq28pj3p34b1k1gp05wvzdzsivj10fl7rwq0bg4rpawxfgs55"; depends=[assertthat R6 shiny]; }; + cicerone = derive2 { name="cicerone"; version="1.0.4"; sha256="1z3i720970kmczg01wxwbyqwd9zby69lchw3pgqwpn2bjr66jimh"; depends=[assertthat R6 shiny]; }; + cif = derive2 { name="cif"; version="0.0.9"; sha256="1rs44di1qjf6j89xg2x0a3s3lsnqxwnz0wcnys8xp68q198gipb6"; depends=[lubridate]; }; cifti = derive2 { name="cifti"; version="0.4.5"; sha256="092334lcpkzv52bg53hzx64dnrwq67f3p9fzwchmafx1l46xrqx9"; depends=[gifti oro_nifti R_utils xml2]; }; - ciftiTools = derive2 { name="ciftiTools"; version="0.1.6.0"; sha256="1fk9cc2jnfa177dg9wjy6gkrhyf3rbmgi98vx65jknwpsg9m5ydn"; depends=[gifti oro_nifti RColorBrewer RNifti xml2]; }; - cimir = derive2 { name="cimir"; version="0.4-0"; sha256="0sp8hd354hnrmbyn3gm2sgvkf32n7kqpg9bc56583ibyfc8s4gwm"; depends=[curl dplyr glue jsonlite purrr rlang stringr tidyr]; }; + ciftiTools = derive2 { name="ciftiTools"; version="0.2.2"; sha256="07p34adw3bxfskmj5lgcd16y41qw9fynjqhcp2b55ljar0lbdj40"; depends=[fields gifti oro_nifti RColorBrewer rgl RNifti viridisLite xml2]; }; + cimir = derive2 { name="cimir"; version="0.4-1"; sha256="0r8fmvqcihxsj0w1g2xm02wwqcgrwadbl5n1dzksw8zpcjfw7fkn"; depends=[curl dplyr glue jsonlite purrr rlang stringr tidyr]; }; cin = derive2 { name="cin"; version="0.1"; sha256="1pwvy5nh5nrnysfqrzllb9fcrpddqg02c7iw3w9fij2h8s2v6kq5"; depends=[]; }; - cinaR = derive2 { name="cinaR"; version="0.1.0"; sha256="13pcxxlx2k1dd2ac7irsjkqq7y6nds5v9y8awbnrfyfr0w5b5zsn"; depends=[ChIPseeker DESeq2 dplyr edgeR fgsea GenomicRanges ggplot2 ggrepel limma pheatmap preprocessCore RColorBrewer sva TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene writexl]; }; + cinaR = derive2 { name="cinaR"; version="0.2.1"; sha256="0i0fkh5j494fy9zy0p67ashqsa7vw3jhf092sw3nfyvmb7k4spnj"; depends=[ChIPseeker DESeq2 dplyr edgeR fgsea GenomicRanges ggplot2 ggrepel limma pheatmap preprocessCore RColorBrewer sva TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene writexl]; }; + cinaRgenesets = derive2 { name="cinaRgenesets"; version="0.1.1"; sha256="0pz3iw559d8rsxmnwd1cqcpv8qnnh9bfvc9ydzwznx8jczbldls8"; depends=[]; }; cinterpolate = derive2 { name="cinterpolate"; version="1.0.0"; sha256="1aw6hs41xin2hhgmi4pr5510v4sn6x735lachpc5gpbxch5h3f82"; depends=[]; }; - cir = derive2 { name="cir"; version="2.1.0"; sha256="1gw0wawla5lfpbyh5hb3mbv5137jgc923g4jshylvjr22bvjqrdm"; depends=[]; }; - circlize = derive2 { name="circlize"; version="0.4.11"; sha256="1s84xl7kv3qc1261xxaq4aqh64gwywhacsf5nh6yf8djw0d1w42d"; depends=[colorspace GlobalOptions shape]; }; + cir = derive2 { name="cir"; version="2.1.1"; sha256="12bxpbi212gvqy6gh7fb580x2rrx9v54i21s1swl7nnplmm9r1yq"; depends=[]; }; + circacompare = derive2 { name="circacompare"; version="0.1.1"; sha256="15vpnh20wni2wmp86xql9737kbxbi28s9a4pi3rihr1w5mcgqfaj"; depends=[ggplot2]; }; + circglmbayes = derive2 { name="circglmbayes"; version="1.3.0"; sha256="0i5aacr7vqznm3rhlznc02xjzjkjliadxhhvsmf8wb2cvivz0wir"; depends=[BH coda ggplot2 Rcpp RcppArmadillo reshape2 shiny]; }; + circle = derive2 { name="circle"; version="0.7.1"; sha256="04gb3575sdlhh5z6bkam8sj2wg9npgq0b9572qm2dlrspmjqvcd4"; depends=[cli httr jsonlite]; }; + circletyper = derive2 { name="circletyper"; version="1.0.0"; sha256="0p5qbx07zsa50kgwmxa9mzv09zv3j2dhpmwqvx51cmk72vy4yykj"; depends=[shiny]; }; + circlize = derive2 { name="circlize"; version="0.4.12"; sha256="1x2j6a80bb4fly3dm91ias964s1gb1cmzj3lyh69ikwjaam0rdmk"; depends=[colorspace GlobalOptions shape]; }; circular = derive2 { name="circular"; version="0.4-93"; sha256="0hki85rs8wc5950pjaw28q54rly2napfbcrx3pchlfap6wwy5kkn"; depends=[boot mvtnorm]; }; + circularEV = derive2 { name="circularEV"; version="0.1.0"; sha256="03qr0sfiqpz0zvm9xihwi07snhxkj5h6bcsxhrsr89xyb70wqwg0"; depends=[circular doParallel foreach ggplot2 mgcv NPCirc]; }; circumplex = derive2 { name="circumplex"; version="0.3.6"; sha256="1b5brqhya8jzxhr4zjmr6660w9mzfyncpdknzpvkdhc149s1ksjd"; depends=[assertthat boot dplyr ggforce ggplot2 glue htmlTable magrittr purrr Rcpp RcppArmadillo rlang tibble tidyr]; }; - cit = derive2 { name="cit"; version="2.2"; sha256="1lf8r3r4zwvs08vl4byhw6rvf54nb7vg83558pi0b5866m7in4sc"; depends=[]; }; citation = derive2 { name="citation"; version="0.4.1"; sha256="050dx029kz37rjmgcbik7rpa34bhhr81lrrsi17v50cy3nkr83x2"; depends=[desc jsonlite yaml]; }; citbcmst = derive2 { name="citbcmst"; version="1.0.4"; sha256="1zkd117h9nahwbg5z6byw2grg5n3l0kyvv2ifrkww7ar30a2yikl"; depends=[]; }; citccmst = derive2 { name="citccmst"; version="1.0.2"; sha256="1b7awn1hjckxisfdi4ck697hwd4a5sqklwi7xzh6kgqhk9pv7vjn"; depends=[]; }; citecorp = derive2 { name="citecorp"; version="0.3.0"; sha256="0lqxa6qfysrk3rpg9fnsxhrfsd0qsbfxhc3b43090fhlxq9gk3wm"; depends=[crul data_table fauxpas jsonlite]; }; ciu = derive2 { name="ciu"; version="0.1.0"; sha256="04fshss0klib74dr997p8kmv9mgbxnkanl8x24x6aild2nv25lz4"; depends=[ggplot2 Rcpp]; }; ciuupi = derive2 { name="ciuupi"; version="1.1.0"; sha256="0czfmmf62p1vml24s87pdwv52spqycchpkqzwk8vyd4n1z27r5s2"; depends=[functional nloptr pracma statmod]; }; + ciuupi2 = derive2 { name="ciuupi2"; version="1.0.1"; sha256="04x02qmqqyrc4h4z4mpl4zn5vr9y28k6j6n30fbr9q238zd543db"; depends=[functional nloptr pracma PreciseSums statmod]; }; civis = derive2 { name="civis"; version="3.0.0"; sha256="12q96bj21832zqqbisfxmnpqw7w72v350lyf7cpjgr7cq7b51brd"; depends=[future httr jsonlite memoise]; }; cjoint = derive2 { name="cjoint"; version="2.1.0"; sha256="1bs380ji9vsc1d77wqhl0ij9xblww3g9x3hiwpcpz26wihqcx7ac"; depends=[DT ggplot2 lmtest Matrix sandwich shiny shinyBS shinyjs survey]; }; - ckanr = derive2 { name="ckanr"; version="0.5.0"; sha256="15ww7svf40j7pd76s93kw8snql0hycliyga4p22bqvm95xy9pmq0"; depends=[crul DBI dbplyr dplyr jsonlite magrittr]; }; - clValid = derive2 { name="clValid"; version="0.6-9"; sha256="0j5vgh1ccfxf2yax08p9zswan2rxnfs85ny88xlqbndkm3gmy80b"; depends=[class cluster]; }; + ckanr = derive2 { name="ckanr"; version="0.6.0"; sha256="1fhyyyklfsi1zva9vg397x8p0zbnchajkjb1kcfm4f861xq60j16"; depends=[crul DBI dbplyr dplyr jsonlite magrittr]; }; + clValid = derive2 { name="clValid"; version="0.7"; sha256="18aiyjhnh5mfdxbzns4cy0r8bymfikhwkybpn4g04qhli5ls8z83"; depends=[class cluster]; }; cladoRcpp = derive2 { name="cladoRcpp"; version="0.15.1"; sha256="0msay6yvm6wc964gwrz31ky5w4mizakji3j6rpkydz0zlrl52v1j"; depends=[Rcpp RcppArmadillo]; }; - clam = derive2 { name="clam"; version="2.3.7"; sha256="0yd6grq0vyf46bc59fgqvwdbrsb9wd4m8vwjpqxfmkag2wr2a8f3"; depends=[IntCal]; }; + clam = derive2 { name="clam"; version="2.3.8"; sha256="0i5slb4cldypzpwlngmj5czz5s5l9b8pahlj98g6y845gcsgjjff"; depends=[IntCal]; }; clampSeg = derive2 { name="clampSeg"; version="1.1-0"; sha256="1138wphhmf5hn5yh8p1fwix4lf2yncbc7xxcnnv2xz1z8b041qhs"; depends=[lowpassFilter stepR]; }; clarifai = derive2 { name="clarifai"; version="0.4.2"; sha256="0igi4xl27nz0r85hpws2zfc2gn5z2nmywp3saxgp74mh2y99lg6s"; depends=[curl jsonlite]; }; clarkeTest = derive2 { name="clarkeTest"; version="0.1.0"; sha256="0vbb3j9rnh42qyp78a4jykp7p560d0ryfp28xgvxax8h8hr80457"; depends=[]; }; - class = derive2 { name="class"; version="7.3-17"; sha256="04qk8qia0qr8893fizmkbd5hsqn6m8383c0cyn9xnmkmvyv8a7xy"; depends=[MASS]; }; + class = derive2 { name="class"; version="7.3-19"; sha256="0dxyxk59fs90713qisanlvk4p0d3l8n8n7zdd4d5c290naaaw83q"; depends=[MASS]; }; classGraph = derive2 { name="classGraph"; version="0.7-5"; sha256="19jb9jr1gfg4karymrbilh0zjrlsczhy2q03x5b0jxnh4ykhxfj8"; depends=[graph Rgraphviz]; }; classInt = derive2 { name="classInt"; version="0.4-3"; sha256="1b1lqhpzxm6b8pza8l3s0cxy74mm9y45lcd3354i2v3bg8m7mply"; depends=[class e1071 KernSmooth]; }; classifierplots = derive2 { name="classifierplots"; version="1.4.0"; sha256="0agxm3vrbs8lqhk1xvfc3wzf0q0hxhgyp23j5qi5mi1drgnw1jj1"; depends=[caret data_table ggplot2 gridExtra png Rcpp ROCR]; }; classifly = derive2 { name="classifly"; version="0.4"; sha256="0mw1vcas0gr1r4yvh0j02zhk7kp5342r0bhhg776hqgqdczgh5zj"; depends=[class plyr]; }; - classyfireR = derive2 { name="classyfireR"; version="0.3.6"; sha256="1xys40pbai7b6xbvc2nip8n6vw2zvg0gm373w3izxzrb62whwd8p"; depends=[cli clisymbols crayon dplyr httr jsonlite magrittr purrr rjson stringr tibble tidyjson tidyr]; }; cld2 = derive2 { name="cld2"; version="1.2.1"; sha256="01p64r2ij1i0xm3835vfnpxmmbnnaigp0md9x1hrq8gfsdwnzv3x"; depends=[Rcpp]; }; - cld3 = derive2 { name="cld3"; version="1.3"; sha256="1xaac0phck00i2pm81m2xphy7r3lvbvj9z14y6asfz0cfjm7acx3"; depends=[Rcpp]; }; + cld3 = derive2 { name="cld3"; version="1.4.1"; sha256="1ag93ascv98nvhp2waklrzgsx2kq9z0p7p12c9446qmgjsirimx2"; depends=[Rcpp]; }; clda = derive2 { name="clda"; version="0.1"; sha256="03zfanvpz1h42h2z38a63fck1p5hqig4w2svknzpw7mryji5q9b1"; depends=[MASS]; }; clean = derive2 { name="clean"; version="2.0.0"; sha256="0zvk3a5yz54g2mn7y1d91z6ljglbyq1hkh4iip1dfyi15chrqv7y"; depends=[cleaner]; }; cleanNLP = derive2 { name="cleanNLP"; version="3.0.3"; sha256="0bc0ya36yhknqhqc76yf9clgiacyb6zypzirzg6i0213bqw2ihdp"; depends=[Matrix reticulate stringi udpipe]; }; @@ -6534,21 +6789,21 @@ in with self; { cleandata = derive2 { name="cleandata"; version="0.3.0"; sha256="1lm7k25j16p888xvd7rzzd3sb3namzjlpjn22xmmpzlzyl0h7dhk"; depends=[]; }; cleaner = derive2 { name="cleaner"; version="1.5.1"; sha256="0qmg9c299bcrwl1r1hhl56rf0sm6sbqgssrk72him4090j6gslyr"; depends=[backports crayon knitr pillar rlang vctrs]; }; cleanerR = derive2 { name="cleanerR"; version="0.1.1"; sha256="0rghn8rx7dj5clmc1dqvqwfm9kiva04k9gxsjjga3109l4jcpg63"; depends=[data_table plyr]; }; - cleangeo = derive2 { name="cleangeo"; version="0.2-3"; sha256="02py25pir16yklffpdicljxhwdf7bqchqllgdk069f5gikfc8yrr"; depends=[maptools rgeos sp]; }; + cleangeo = derive2 { name="cleangeo"; version="0.2-4"; sha256="0yynf5d2lbz6329brzcnjm91rg6is60h2xlavz73lfxx3v549dy3"; depends=[maptools rgeos sp]; }; cleanr = derive2 { name="cleanr"; version="1.3.1"; sha256="00h6kqsz9f6k2ngcpqzfqpp14c5a6x5f7ghmdnvi2nwyqipzk6xi"; depends=[checkmate pkgload rprojroot]; }; clere = derive2 { name="clere"; version="1.2.0"; sha256="0qc26ycycxphrbksk7jb1m6vh66a2zsnw8k4jnazs23sqdg24im9"; depends=[Rcpp RcppEigen]; }; clespr = derive2 { name="clespr"; version="1.1.2"; sha256="1993kd70w48a110im47vcpll0c6nfrm7m33r6l8rzgwnpsmcls8g"; depends=[AER clordr doParallel foreach magic MASS pbivnorm survival]; }; clevr = derive2 { name="clevr"; version="0.1.1"; sha256="077qhqfzcy1ciar70df7q98ms003b9mnqgji1nxkx5ncw9hdkzd4"; depends=[BH Matrix Rcpp]; }; clhs = derive2 { name="clhs"; version="0.7-3"; sha256="19v617dayirbzb5w6mz79lsjinvr2jjlwdm61pd2pppk099fxgqr"; depends=[cluster ggplot2 plyr raster reshape2 scales sp]; }; - cli = derive2 { name="cli"; version="2.2.0"; sha256="1f20mk9pb9kqn0ni2z0sqsx8qj1apcbiw08pa4gwry142zv7m9rr"; depends=[assertthat crayon fansi glue]; }; + cli = derive2 { name="cli"; version="2.5.0"; sha256="174dnlcl0i21rbs0z4as0v9iic60bs4z88152ibjljva0nzdyrsh"; depends=[glue]; }; cliapp = derive2 { name="cliapp"; version="0.1.1"; sha256="0v62lbcsja0xmlpqcps370n5c7bk4j2n8pwh9xyif5s4wpf82qz1"; depends=[cli crayon fansi glue prettycode progress R6 selectr withr xml2]; }; - clickR = derive2 { name="clickR"; version="0.5.27"; sha256="023vcax25kdp42z7nlb635zwdiz4fspxiz8zj679d8g4g897g9fz"; depends=[beeswarm boot flextable lme4 lmerTest officer xtable]; }; + clickR = derive2 { name="clickR"; version="0.7.35"; sha256="0icvn6q6ii4kv5xyxi61x9zlchx0h72v8csfx64x7mxsgi9w1bam"; depends=[beeswarm stringdist]; }; clickstream = derive2 { name="clickstream"; version="1.3.1"; sha256="0z1yy5lr9m5x9ybimjy3f6kn490abdi038xi0qw7ny80f1ca6ry7"; depends=[arules ClickClust data_table ggplot2 igraph linprog MASS plyr reshape2 Rsolnp]; }; clifford = derive2 { name="clifford"; version="1.0-2"; sha256="17br7p4zj1cjf1nbwbk0a2jjxj589qgvlnzi6yp4dqlf2g0w01z6"; depends=[BH Rcpp]; }; clifro = derive2 { name="clifro"; version="3.2-3"; sha256="151j8v6d0wr5np5i8wb7b1k398cg2fz6yndpz8r0rh2d3yx5544l"; depends=[ggplot2 lubridate magrittr RColorBrewer RCurl reshape2 rvest scales xml2]; }; clikcorr = derive2 { name="clikcorr"; version="1.0"; sha256="0zdnbcl5q293mmm6pbn4ri7p1q6z6sff74axsb3nyd153v2xamr5"; depends=[mvtnorm]; }; climaemet = derive2 { name="climaemet"; version="0.2.0"; sha256="0jhyf0wrq5scs8jcn2bpl8fhlimhdkd39pxzdc26zwwya5683cas"; depends=[climatol dplyr gganimate ggplot2 ggpubr ggthemes gtable httr jpeg jsonlite lubridate magrittr RColorBrewer rlang scales stringr tibble tidyr]; }; - climate = derive2 { name="climate"; version="0.9.8"; sha256="0fyj0zmyavsip921axwcqm54jd9dqyzir0761vczn51pw7kqk6y0"; depends=[curl httr XML]; }; + climate = derive2 { name="climate"; version="1.0.1"; sha256="16r0463wbdgd5pycmk0hybr70ysql10ijx2ixszs98xndi259yj7"; depends=[curl data_table httr XML]; }; climateStability = derive2 { name="climateStability"; version="0.1.3"; sha256="1zag722sznr22xid2v1k4a9sh3sr3grfa3wwd2m943zpvyi1sk9a"; depends=[raster]; }; climatol = derive2 { name="climatol"; version="3.1.2"; sha256="0p3nk4n7izj0cmmqd9apa1gix5lfdzp08ydy0n7rkl5kbkmrkb6n"; depends=[mapdata maps]; }; climatrends = derive2 { name="climatrends"; version="0.1.7"; sha256="0dj095jafl571hvf2bp21mdbp2pln0li9bgpymzjbpnbkvn8309j"; depends=[]; }; @@ -6556,15 +6811,17 @@ in with self; { clime = derive2 { name="clime"; version="0.4.1"; sha256="0qs9i7cprxddg1cmxhnmcfhl7v7g1r519ff2zfipxbs59m5xk9sf"; depends=[lpSolve]; }; climextRemes = derive2 { name="climextRemes"; version="0.2.2"; sha256="04ra2xqkf9zg7hbmb5ycfql9nwkabxy8412d05ajshld4cr0gi45"; depends=[boot extRemes]; }; climwin = derive2 { name="climwin"; version="1.2.3"; sha256="1r2x5941k8l9z3517389y120sfhrskdpchc0pkibznza8aa95r85"; depends=[evd ggplot2 gridExtra lme4 lubridate Matrix MuMIn nlme numDeriv RcppRoll reshape]; }; - clinDR = derive2 { name="clinDR"; version="2.3"; sha256="1bmbbcf5ikima868l2cn9r8xja3zw4zw799i7nb8jb0hhv6fxh80"; depends=[doParallel DoseFinding foreach ggplot2 rstan]; }; + clinDR = derive2 { name="clinDR"; version="2.3.5"; sha256="0p5pq0kpm8sfxv1a1dp2wyykp1qqbxbjz0c4f20igc25aazd7kaz"; depends=[doParallel DoseFinding dplyr foreach ggplot2 glue magrittr purrr rstan shiny tibble tidyr waiter]; }; clinPK = derive2 { name="clinPK"; version="0.9.0"; sha256="1n1m8szd8mxdshwz8l3hfdxi7zrmsah46kxkv7jiffwnfhijfhsm"; depends=[curl testit]; }; clinUtiDNA = derive2 { name="clinUtiDNA"; version="1.0"; sha256="0x3hb09073gkh60fc8ia0sfk948sm6z6j8sqkz275k4m8ryrabas"; depends=[]; }; clinfun = derive2 { name="clinfun"; version="1.0.15"; sha256="0cv1kdxj911scri82ms21lk9frsdp4251fawdsbqinby7k6hhmkc"; depends=[mvtnorm]; }; - clinmon = derive2 { name="clinmon"; version="0.2.0"; sha256="01gj33kmbg6z9qln9la6ph0rsdk10j18jbigjykhjcfpjnfs1inn"; depends=[]; }; + clinmon = derive2 { name="clinmon"; version="0.6.0"; sha256="0cd5mrirfll0zbm9k8glwdqnh4qy4dlfnsypr3xhyf6ppgm35hlv"; depends=[signal]; }; clinsig = derive2 { name="clinsig"; version="1.2"; sha256="1wgfl9kks57yizrf8z6x7dhmbl3a80q8nnj3a5n2hpc9yr8l9ijf"; depends=[]; }; + clinspacy = derive2 { name="clinspacy"; version="1.0.2"; sha256="134nvkircy1a1rmsg2nszk2r8bcdmikmrx6plchdz8gxyjd6jmya"; depends=[assertthat data_table magrittr rappdirs reticulate]; }; clipp = derive2 { name="clipp"; version="0.1.0"; sha256="0phh2nbpfb5p80ijll4h9j2hy4syl8802a2lhlm5grirws1iif84"; depends=[]; }; clipr = derive2 { name="clipr"; version="0.7.1"; sha256="1ywa4kipwc2d7na6iiz3wzdah99h6aynnh74yxl3nzl40xxlgbgz"; depends=[]; }; clisymbols = derive2 { name="clisymbols"; version="1.2.0"; sha256="1q7gi2zmykhzas9v8fdnbpdq7pzdcpbhim1yxvd2062l777g4j86"; depends=[]; }; + clock = derive2 { name="clock"; version="0.3.0"; sha256="1yg16g2rnxm3ad1kqf3vrpmxm8zh08ipik0dvx7p3q6djmfm6y53"; depends=[cpp11 ellipsis rlang tzdb vctrs]; }; clogitL1 = derive2 { name="clogitL1"; version="1.5"; sha256="0y6a6s5l98i0vrj66biwr17g6pzpmm5kfz4c57af0yhv7c4s4was"; depends=[Rcpp]; }; clogitLasso = derive2 { name="clogitLasso"; version="1.1"; sha256="1j2kscd6d1jham6yqx5rp78x5vfj2faylkxkbcjaqbynlnqbbxd0"; depends=[foreach lassoshooting]; }; clogitboost = derive2 { name="clogitboost"; version="1.1"; sha256="19wcb7229amlxn6xahxj6pf9rwfm02s7qkxz2yvyhnq95y0clxkm"; depends=[Rcpp]; }; @@ -6574,34 +6831,35 @@ in with self; { clpAPI = derive2 { name="clpAPI"; version="1.3.0"; sha256="1ivrvipnvnqf1mnvvqnv2jgf69i0h84f46n8x41bx89lag0161bv"; depends=[]; }; clr = derive2 { name="clr"; version="0.1.2"; sha256="088ks9lrhlyvg3yvlfmb0091yp6qp5bzg9h5r6ryv3bk6y56sajx"; depends=[dplyr lubridate magrittr]; }; clttools = derive2 { name="clttools"; version="1.3"; sha256="0va9k1b4xsb2sgpxzvid6sa8m6b8i3r4kgghclmb78nnrs480cwi"; depends=[]; }; - clubSandwich = derive2 { name="clubSandwich"; version="0.5.2"; sha256="051943yji30r3mwx9dmy63rfjq3dr2zkfg852cpnysyq15f6vpbq"; depends=[mathjaxr sandwich]; }; - clue = derive2 { name="clue"; version="0.3-58"; sha256="1rwwxlnpl1k0n4k96vxc9zajw9kb4syqwzj76fvaf0qim8p6ddia"; depends=[cluster]; }; + clubSandwich = derive2 { name="clubSandwich"; version="0.5.3"; sha256="0jazgka18bb5n58d5sn94q7rc9sac82qrpl2i5b4rkx9q2pb39cn"; depends=[sandwich]; }; + clue = derive2 { name="clue"; version="0.3-59"; sha256="0ychvjbqkcgqdp5gy4hsi4297phywd7fj89y3yi5ckmnmjb39kjm"; depends=[cluster]; }; + clusTransition = derive2 { name="clusTransition"; version="1.0"; sha256="0q5cxkb5mrygyp2zg177rwn5cgpnyqln7yjvjflb48ll3jr98342"; depends=[flexclust]; }; cluscov = derive2 { name="cluscov"; version="1.1.0"; sha256="0345v5r6b53243h5bir29v0w77pmwjqjkqfrjnk5j5r1wbh98q1w"; depends=[MASS quantreg]; }; clusrank = derive2 { name="clusrank"; version="1.0-0"; sha256="1ph7rn5cqv67nspadlm8j2vlwvn9c8n0h9qr90003jn0kwz8dic4"; depends=[MASS Rcpp]; }; clust_bin_pair = derive2 { name="clust.bin.pair"; version="0.1.2"; sha256="11lqd3vmx4kg08n6iv9na8rra49dkldx4f8jyf43hppbjrbvfinm"; depends=[]; }; clustDRM = derive2 { name="clustDRM"; version="0.1-0"; sha256="1c5z08a15scp3nrwyh0c03pdaawvm3ivbygqpbglwxim7zf73rd2"; depends=[caret doParallel DoseFinding DT foreach IsoGene MCPMod multcomp ORCME ORIClust pheatmap RColorBrewer readr shiny]; }; clustEff = derive2 { name="clustEff"; version="0.2.0"; sha256="0kh3jzzqnchkgp0w1pz2sjxr215lyjh62v5857g94h91h5kn70y6"; depends=[cluster fda ggplot2 ggpubr qrcm]; }; clustMD = derive2 { name="clustMD"; version="1.2.1"; sha256="0w4s9dab2mm5x0xibyl6s101c64if945a2cmwin9psd95p76mcny"; depends=[ggplot2 MASS mclust msm mvtnorm reshape2 truncnorm viridis]; }; - clustMixType = derive2 { name="clustMixType"; version="0.2-9"; sha256="08qfmchj0dk4knw5fd4c1ydsg8qi3vjslwk4q6jlk2f8i2vafb1g"; depends=[RColorBrewer tibble]; }; - clustcurv = derive2 { name="clustcurv"; version="2.0.0"; sha256="1zjyf81ifd2sgkgs548iy1awjhjmb541rrrw2pb92cn8ph7z7nc1"; depends=[data_table doParallel doRNG foreach ggfortify ggplot2 Gmedian KernSmooth npregfast RColorBrewer survival tidyr wesanderson]; }; - cluster = derive2 { name="cluster"; version="2.1.0"; sha256="055af3yz2biqbsbwm4arwr1yqnj4gicpzv2i6dbfl5pnz2z5byga"; depends=[]; }; + clustMixType = derive2 { name="clustMixType"; version="0.2-11"; sha256="0xriq0flzwf9kvlkl95d253fc1ahwvc8qghiqma77wimg3kxkxak"; depends=[RColorBrewer tibble]; }; + clustcurv = derive2 { name="clustcurv"; version="2.0.1"; sha256="1xkl84pd1a3phl5yfm21yr5c0gbmmg1wk9b0lyl2x8466v5hl53q"; depends=[doParallel doRNG foreach ggfortify ggplot2 Gmedian npregfast RColorBrewer survival]; }; + cluster = derive2 { name="cluster"; version="2.1.2"; sha256="168l653ygkg21fwrqrf7lsqi5p6jzhgmcvhrwv7lznkdzdhag2jw"; depends=[]; }; cluster_datasets = derive2 { name="cluster.datasets"; version="1.0-1"; sha256="0i68s9305q08fhynpq24qnlw03gg4hbk4184z3q3ycbi8njpr4il"; depends=[]; }; clusterCrit = derive2 { name="clusterCrit"; version="1.2.8"; sha256="10pz1bikdbkm2ky3xnagp0qv60whalavp6j39b4p7d75jj5xcxgk"; depends=[]; }; clusterGeneration = derive2 { name="clusterGeneration"; version="1.3.7"; sha256="0p1dwl08bf20h7pnspnsycrp3v48nm2miwcnlklyc4gdyzc2jksk"; depends=[MASS]; }; clusterGenomics = derive2 { name="clusterGenomics"; version="1.0"; sha256="127hvpg06is4x486g1d5x7dfkrbk7dj35qkds0pggnqxkq3wsc1c"; depends=[]; }; - clusterPower = derive2 { name="clusterPower"; version="0.6.111"; sha256="1mwq188x9d495my75cdcahfjm3w46cas9jqxks5c0j63395cw9g3"; depends=[lme4]; }; + clusterPower = derive2 { name="clusterPower"; version="0.7.0"; sha256="1ha7iz1afmgccxhxsl3y1fd9rbf35nrzp6bsz4c4zl0931xbazfb"; depends=[car dplyr foreach lme4 lmerTest mathjaxr nlme progress R_utils shiny tidyr]; }; clusterRepro = derive2 { name="clusterRepro"; version="0.9"; sha256="0s7qqvaf5yxxwhw6qyzfmk65c49yz405gljarwav6aglkx9883cl"; depends=[]; }; - clusterSEs = derive2 { name="clusterSEs"; version="2.6.2"; sha256="15a9hn8g70y64v5lq91mwjbx411ji2b5zvm1wm4qz820jri5wy20"; depends=[AER Formula lmtest mlogit plm sandwich]; }; - clusterSim = derive2 { name="clusterSim"; version="0.49-1"; sha256="0gnxmv2zr9jzjfygsi3bfm2la81pvfrhh4bra7k8839sqb263v1q"; depends=[ade4 cluster e1071 MASS R2HTML rgl]; }; + clusterSEs = derive2 { name="clusterSEs"; version="2.6.5"; sha256="0d8b79mg0wxfpmx3xq22p9apa2cs2ylbml7lf37w386s6kdgz7ns"; depends=[AER dfidx Formula lmtest mlogit plm sandwich]; }; + clusterSim = derive2 { name="clusterSim"; version="0.49-2"; sha256="1plyvc4zjbs97rb3z2x23a8zvwmip4ydhksbjaqxd5h7knyfpa3k"; depends=[ade4 cluster e1071 MASS R2HTML rgl]; }; clusterability = derive2 { name="clusterability"; version="0.1.1.0"; sha256="15gimcs6wrasafg1ys7id0mkg9fvacxbwpgg9d4b5avk4gff39bs"; depends=[diptest]; }; clusteredinterference = derive2 { name="clusteredinterference"; version="1.0.1"; sha256="01w7i9pmvwmrlf5q6y2d48ib0bm16j16xiw4pqnrvbndx4d6wf6n"; depends=[cubature Formula lme4 numDeriv rootSolve]; }; clusterhap = derive2 { name="clusterhap"; version="0.1"; sha256="1ic6588mqp146jsvrxlxk449zw4n81xixgrny9r29497z7hg5a1m"; depends=[]; }; clustering_sc_dp = derive2 { name="clustering.sc.dp"; version="1.0"; sha256="0cppka7613cbjjf1q2yp6fln511wbqdhh8d4gs6p0fbq379kzmvc"; depends=[]; }; - clustermole = derive2 { name="clustermole"; version="1.0.1"; sha256="15d7khwg4rjshbkkcqrmw9dk8wy683z8ix5n6xdrlvp0rq3l3n2c"; depends=[dplyr GSVA magrittr rlang tibble tidyr]; }; + clustermole = derive2 { name="clustermole"; version="1.1.0"; sha256="15v3fspp82z7vh5f1ym89mrmajl8b7qymwr1fqa6kfi982dzhrar"; depends=[dplyr GSEABase GSVA magrittr rlang singscore tibble tidyr]; }; clustermq = derive2 { name="clustermq"; version="0.8.95.1"; sha256="1777c1xg15p6dm5grz64yd35nbhmj914dyxpymv6hl25g740c2ky"; depends=[narray progress purrr R6 Rcpp]; }; clusternomics = derive2 { name="clusternomics"; version="0.1.1"; sha256="05nkw6h2dvky07fj50myzw5xlkqyiflbn4vwqw8a1q2idv4awi7b"; depends=[magrittr MASS plyr]; }; clusternor = derive2 { name="clusternor"; version="0.0-4"; sha256="19ac45jn9lkd600nnaib2f0ricdvh0dv3l1ap6c9vn655rgl9i3s"; depends=[Rcpp]; }; - clustertend = derive2 { name="clustertend"; version="1.4"; sha256="1aqg8cy1hk3lmzvyqh9qc1mcknrva2i0c77hyd0yff9whz80ik4j"; depends=[]; }; + clustertend = derive2 { name="clustertend"; version="1.5"; sha256="194acf2pd71jxyyjj7ri9mpnx094zziwmq6w9lfclifrnkqv6ra9"; depends=[]; }; clusteval = derive2 { name="clusteval"; version="0.1"; sha256="1ld0bdl4fy8dsfzm3k7a37cyxc6pfc9qs31x4pxd3z5rslghz7rj"; depends=[mvtnorm Rcpp]; }; clustrd = derive2 { name="clustrd"; version="1.3.7-2"; sha256="0j0nmqc9q9djg824g89z27xizdy1jdsygz1gc0r0mrzdd3dyk2ya"; depends=[ca cluster corpcor dplyr fpc GGally ggplot2 ggrepel plyr rARPACK tibble]; }; clustree = derive2 { name="clustree"; version="0.4.3"; sha256="0lxydy2f83qqd5dhlp2l546jax759l43b29j6g82079yzg1szwsz"; depends=[checkmate dplyr ggplot2 ggraph ggrepel igraph rlang tidygraph viridis]; }; @@ -6609,41 +6867,44 @@ in with self; { clustsig = derive2 { name="clustsig"; version="1.1"; sha256="0n5nf712vsa8zb0c2lv4gjqsgva62678vjngr9idgswb73shxm8v"; depends=[]; }; clustvarsel = derive2 { name="clustvarsel"; version="2.3.4"; sha256="0hzvfcjs1k13j695jx6m0fgmcxy284gp4d59b7zmnvqib153x89x"; depends=[BMA foreach iterators Matrix mclust]; }; clv = derive2 { name="clv"; version="0.3-2.2"; sha256="072jn3xh6ii7vfp0gx03k1hiafnla1lkyn5hpj17nmqc0jvzp683"; depends=[class cluster]; }; + cmR = derive2 { name="cmR"; version="1.0.1"; sha256="1zhgab0laxhjmqiycsbh30f45kqch528mf4zdjlrklimv95wfc2r"; depends=[fields Matrix]; }; + cmaRs = derive2 { name="cmaRs"; version="0.1.0"; sha256="08fq9qfgx812d5m0m4amq2k0w5w2cbv7ljpfgjwdqhshix3dxvis"; depends=[AUC earth Matrix Rmosek Ryacas0 stringr]; }; cmaes = derive2 { name="cmaes"; version="1.0-11"; sha256="1hwf49d1m660jdngqak9pqasysmpc4jcgr8m04szwbyzyy6xrm5k"; depends=[]; }; cmaesr = derive2 { name="cmaesr"; version="1.0.3"; sha256="03zx2nrw24wmmjjpyh8pswasjjq0amf0g375fm2b3s111dx8fbj9"; depends=[BBmisc checkmate ggplot2 ParamHelpers smoof]; }; - cmcR = derive2 { name="cmcR"; version="0.1.3"; sha256="06337d039ycv6li4hl3dl710xsdcpzp257i4niy853qx3grjlr8z"; depends=[assertthat dplyr ggnewscale ggplot2 imager magrittr purrr quantreg rlang scales stringr tibble tidyr x3ptools zoo]; }; + cmcR = derive2 { name="cmcR"; version="0.1.6"; sha256="1q56hhj2hdn9a9jx6z0cqy3b7w13ngfidwpq4vgfxfiq4axf7qzn"; depends=[assertthat dplyr ggnewscale ggplot2 imager magrittr purrr quantreg rlang scales stringr tibble tidyr x3ptools zoo]; }; cmce = derive2 { name="cmce"; version="0.1.0"; sha256="0d52ci906zbd4q43qylcyw93acxh7f20jn3r0k74ynyy47131dnd"; depends=[]; }; cmdfun = derive2 { name="cmdfun"; version="1.0.2"; sha256="1pbcq7hi2lcmqnghmy3q2fsk0c9fy5m0637acyzmc096fxbx723j"; depends=[magrittr purrr R_utils rlang testthat usethis]; }; cmenet = derive2 { name="cmenet"; version="0.1.1"; sha256="0f7bci6nn63q243i7wvhr9mqlf64gw8w042nc1lqb986p7zfxihk"; depends=[glmnet hierNet MASS Rcpp RcppArmadillo sparsenet]; }; - cmfrec = derive2 { name="cmfrec"; version="2.3.2"; sha256="192xlmylidq8rlscf5sg1ly6zl8lwpi7pfqcqb207lxl9s25mhw9"; depends=[]; }; + cmfrec = derive2 { name="cmfrec"; version="2.4.5"; sha256="1lq1ji1l5arnydmql49ifffk8im76f30pzmhwmgijj9qf269j5kl"; depends=[]; }; cmm = derive2 { name="cmm"; version="0.12"; sha256="0q6hs56hhi9vaanx7i7gg7ncv0h29lndla66g9chzmh3lchq3r20"; depends=[]; }; cmmr = derive2 { name="cmmr"; version="0.1.2"; sha256="0nik1pzd1rckalvn7xh6s699kkdjnra3q3bn5x16c1lmpz5bp2s4"; depends=[httr progress RJSONIO]; }; cmna = derive2 { name="cmna"; version="1.0.3"; sha256="07wjjbhpd8g2gsmxh9cq2ij81qvd6y7x8zabspk9jilmxhycpxy6"; depends=[]; }; cmocean = derive2 { name="cmocean"; version="0.3-1"; sha256="0y6yd3x2swx88r7kv6f9lrbf3zzawhf2x8izszgg4zb21pkal6k8"; depends=[]; }; cmprsk = derive2 { name="cmprsk"; version="2.2-10"; sha256="1xnx2zanw548prxsw2zw5cddkkg6kj97jgyzw67achq5mnsvfbg8"; depends=[survival]; }; cmprskQR = derive2 { name="cmprskQR"; version="0.9.2"; sha256="1b3di5fsgglriv00fxydpc4p8lh0xcgi6jc04awq2vmp6s8kvjmw"; depends=[quantreg survival]; }; + cmprskcoxmsm = derive2 { name="cmprskcoxmsm"; version="0.2.0"; sha256="0xqgvqwp1777mpxg839mqwmphykxd58b0znp2hqdfphvd5315vi2"; depends=[ggplot2 sandwich survival twang]; }; cmrutils = derive2 { name="cmrutils"; version="1.3.1"; sha256="0nrq84bkd23lvvg8ls2smkjcnfnydhbcni3n6s8w0579i9xga8dv"; depends=[chron]; }; cms = derive2 { name="cms"; version="0.1.0"; sha256="0m3cxvw40nyr1jpdkhg5nbms16hkzj0mrx5nl39x1l42cx2hcjrl"; depends=[assertthat dplyr magrittr readr rlang rvest xml2]; }; - cmsaf = derive2 { name="cmsaf"; version="3.0.0"; sha256="0lq3xr537x9h2j8dajmb3lqpc2yas2lk5f7fql0v914ibhffg8pd"; depends=[cmsafops cmsafvis colorspace colourpicker fields FNN mapproj maps maptools ncdf4 R_utils raster rworldxtra shiny shinyFiles shinyjs shinythemes sp]; }; - cmsafops = derive2 { name="cmsafops"; version="1.0.0"; sha256="1gjqc9xsiv0n3rc67jhmdz47l0di3cr3k27ah46gxy17glb1mlc3"; depends=[assertthat fields FNN ncdf4 rainfarmr raster sp]; }; - cmsafvis = derive2 { name="cmsafvis"; version="1.0.1"; sha256="02mhmrcid8npcq5gzsjwp88gqwgzqwx2015mfq6y1i60gizsa6zf"; depends=[animation assertthat cmsafops colorspace countrycode fields mapproj maps maptools ncdf4 png progress raster rworldxtra sp yaml]; }; - cmstatr = derive2 { name="cmstatr"; version="0.7.1"; sha256="0fi5lv3zaxylxm8qi0msj76k4qgld5gchqlmd4gqv52hscp20cgb"; depends=[dplyr generics ggplot2 kSamples MASS rlang tibble]; }; + cmsaf = derive2 { name="cmsaf"; version="3.1.0"; sha256="1q1nx520k3h6063fnn489xlr2dk4lbqpvvmrzfnrc4f7vispni91"; depends=[cmsafops cmsafvis colorspace colourpicker data_table fields FNN mapproj maps maptools ncdf4 R_utils raster rworldxtra SearchTrees shiny shinyFiles shinyjs shinythemes sp]; }; + cmsafops = derive2 { name="cmsafops"; version="1.1.1"; sha256="0j4yvxzy9k1w4jaxzf10xrwv4s92lxnib4xzjsi07as65pad97x0"; depends=[assertthat fields FNN ncdf4 progress rainfarmr raster SearchTrees sp trend]; }; + cmsafvis = derive2 { name="cmsafvis"; version="1.1.1"; sha256="0vyxn9vm8ysypahvcqqxh4z0xx887871z1si8193p40xs1lahy2v"; depends=[animation assertthat cmsafops colorspace countrycode fields gridExtra mapproj maps maptools ncdf4 png progress raster rasterVis RColorBrewer rgdal rworldxtra SearchTrees sp yaml]; }; + cmstatr = derive2 { name="cmstatr"; version="0.8.0"; sha256="1afqr87n4pzhiq9skawjcicw28l5554c7807yrdlg32h8bj7mjfp"; depends=[dplyr generics ggplot2 kSamples MASS rlang tibble]; }; cmvnorm = derive2 { name="cmvnorm"; version="1.0-6"; sha256="1wf23w9gxrrgw7j740r381xrss09inzd7mrg6g7wz883c9madbfn"; depends=[elliptic emulator]; }; cna = derive2 { name="cna"; version="3.0.1"; sha256="0hhx3gzd8sjy3l6fx9ylbz171w5xg381al0ccrsp31q2l67d5ls5"; depends=[car Matrix matrixStats Rcpp]; }; cnaOpt = derive2 { name="cnaOpt"; version="0.2.0"; sha256="0zm442nbbnnz47rzh57f0al21kcq0bd81g57q5b9dszf4s64japl"; depends=[cna dplyr ggplot2 matrixStats Rcpp]; }; cnbdistr = derive2 { name="cnbdistr"; version="1.0.1"; sha256="05qi41jimslbngjgbwzfda0q25hb28ax79v9yckvrbpgjc8dk990"; depends=[hypergeo]; }; cncaGUI = derive2 { name="cncaGUI"; version="1.0"; sha256="1v55kvrc05bsm1qdyfw3r3h64wlv3s6clxbr8k512lfk99ry42kn"; depends=[MASS plotrix rgl shapes tcltk2 tkrplot]; }; - cnum = derive2 { name="cnum"; version="0.1.2"; sha256="0xf8fna91pb7xqgz43a9h32x4gkyak5bqvc01wz2sm02f2rj06cx"; depends=[BH Rcpp stringr]; }; + cnum = derive2 { name="cnum"; version="0.1.3"; sha256="0iphbx5ii4ij0bi9nqdz793i4gk2164jlgz5xn8yzsayjmizhdk2"; depends=[BH Rcpp stringr]; }; coRanking = derive2 { name="coRanking"; version="0.2.1"; sha256="10489vbd917mzz5lw7ygi6q8q5qa7sp5d8xgv1ykn4lfx0avch69"; depends=[]; }; coala = derive2 { name="coala"; version="0.6.0"; sha256="0h7kc12yc90y5i733l6sfd9h12h0a2c7wv9wscjslj18sl3w3ccv"; depends=[assertthat digest R6 Rcpp RcppArmadillo rehh scrm]; }; coalescentMCMC = derive2 { name="coalescentMCMC"; version="0.4-1"; sha256="0xxv1sw5byf84wdypg5sfazrmj75h4xpv7wh4x5cr9k0vgf80b3s"; depends=[ape coda lattice Matrix phangorn]; }; - coalitions = derive2 { name="coalitions"; version="0.6.15"; sha256="0i9nsbr8z3glxvx1ddm51l98q5xakalmqyvgmy7kmcjm6fb6xdx4"; depends=[checkmate dplyr ggplot2 gtools jsonlite lubridate magrittr purrr RCurl rlang rvest stringr tibble tidyr xml2]; }; + coalitions = derive2 { name="coalitions"; version="0.6.18"; sha256="055m3zd3kpgz0n322y56fk2bj6x9pm37fs6x620vf2lyw0pyl6hj"; depends=[checkmate dplyr ggplot2 gtools jsonlite lubridate magrittr purrr RCurl rlang rvest stringr tibble tidyr xml2]; }; coarseDataTools = derive2 { name="coarseDataTools"; version="0.6-5"; sha256="1k42vl49kfbllc5d66yn7y9f4jgbkfibmd85nl7hwm0gkgkssg36"; depends=[MCMCpack]; }; - cobalt = derive2 { name="cobalt"; version="4.2.4"; sha256="18aqhxvkmf7vwja4a4y9jaqys9gy84sx5bq5rh3fszhhs17i3954"; depends=[backports crayon ggplot2 gridExtra gtable rlang]; }; + cobalt = derive2 { name="cobalt"; version="4.3.1"; sha256="1y7fh3lrbj5sqkqhnyl4lm7g75dld96gap95xfds70x01iq6mqk7"; depends=[backports crayon ggplot2 gridExtra gtable rlang]; }; cobiclust = derive2 { name="cobiclust"; version="0.1.0"; sha256="068cqrhx7lxsvcjb62rgrca7y20cybz4445bl1qc6k16ca4bh0m9"; depends=[cluster]; }; cobs = derive2 { name="cobs"; version="1.3-4"; sha256="0hiw5smk6kgk0gb9840kcqkhkybl7n30s77xhjc395x09izbgix1"; depends=[quantreg SparseM]; }; coca = derive2 { name="coca"; version="1.1.0"; sha256="1lh7q3ip1jaz5zj5zcnd5whwpjw6zcrxs6j0j8mnmjsnw2kr4m5n"; depends=[caret cluster fpc glmnet Matrix nnet pheatmap RColorBrewer sparcl]; }; - cocktailApp = derive2 { name="cocktailApp"; version="0.2.1"; sha256="1aq7m3qb4s5v59ym8p5vh7lr5s1xfp8b04x64a014k47gakgiw1d"; depends=[dplyr DT forcats ggplot2 ggtern magrittr shiny shinythemes tibble tidyr]; }; + cocktailApp = derive2 { name="cocktailApp"; version="0.2.2"; sha256="1dfalz1psmy1h8hb8hksgr7iq05ckf22yick7syhjapprb556mik"; depends=[dplyr DT forcats ggplot2 ggtern magrittr shiny shinythemes tibble tidyr]; }; cocor = derive2 { name="cocor"; version="1.1-3"; sha256="106zyrrypil8jyg0pva5zj4hgb53z81nca3d0mh2q3j55zq3wl12"; depends=[]; }; cocorresp = derive2 { name="cocorresp"; version="0.4-1"; sha256="10prxmc80yk0l5v1gcy92clmjvjywimypqpzjb6gh5pipsqr4swr"; depends=[vegan]; }; cocron = derive2 { name="cocron"; version="1.0-1"; sha256="0dl14y9v9kndy5gzhhbhq3f31ja724y1hra40givy6bij7h2cj30"; depends=[]; }; @@ -6651,18 +6912,21 @@ in with self; { coda_base = derive2 { name="coda.base"; version="0.3.1"; sha256="0rz0hlhww9ja1y40yi4fah468apwp1xcnbbl1qmfggil863l5fqa"; depends=[Rcpp RcppArmadillo]; }; codadiags = derive2 { name="codadiags"; version="1.0"; sha256="1x243pn6qnkjyxs31h1hxy8x852r0fc952ww77g40qnrk8qw79xg"; depends=[coda]; }; codalm = derive2 { name="codalm"; version="0.1.0"; sha256="0gfvq6pyqm1slj2bcla65dliffk0fc99hc7ga5142bqxmmr9bx35"; depends=[future future_apply SQUAREM]; }; + codeCollection = derive2 { name="codeCollection"; version="0.1.2"; sha256="0jimahw008l2x4c646dwf6f5vw9xlh8rfm7l6kgj8q4iymzbr8rm"; depends=[Epi]; }; codebook = derive2 { name="codebook"; version="0.9.2"; sha256="0hxyzwpjbvfzad8h2428q94m961mmwvv28nagw2d36qxd10awh16"; depends=[dplyr forcats ggplot2 glue haven htmltools jsonlite knitr labeling labelled likert purrr rlang rmdpartials skimr stringr tibble tidyr tidyselect vctrs]; }; codebreaker = derive2 { name="codebreaker"; version="0.0.2"; sha256="12gjaziwzzisx4j70z8k17k6i5wdsdyk542yfx04rin4ks829f34"; depends=[beepr cli]; }; codemetar = derive2 { name="codemetar"; version="0.1.9"; sha256="096habmcncyfadly4zflydjayifklifjr4iqfpfg4hl43yq9a5q2"; depends=[cli commonmark crul desc gert gh jsonlite magrittr memoise pingr pkgbuild purrr remotes sessioninfo urltools xml2]; }; + codename = derive2 { name="codename"; version="0.1.0"; sha256="0cz1wdzrw2kzw2jigazbb4v5k1biz09vkjigfimckg9a4f8aba3j"; depends=[]; }; codep = derive2 { name="codep"; version="0.9-1"; sha256="17jziwm56icswa4ngp51ah8w1ma7ij3cksbdaipk0ikqvb5kinkb"; depends=[]; }; + coder = derive2 { name="coder"; version="0.13.5"; sha256="155rv52rxalnf8yns1p5zh590r6j1q8h38m3fk8xvqx0gyk8fbrz"; depends=[data_table decoder generics tibble]; }; codetools = derive2 { name="codetools"; version="0.2-18"; sha256="0a2c115glq8jxixwfigrpvjabhxchn9r4mc40y41dg9dg6wsd7hs"; depends=[]; }; codexcopd = derive2 { name="codexcopd"; version="0.1.0"; sha256="0pkl29fybflnj42xj8agyw6s3xif9vr5690vlkv5n3dxs8ji582h"; depends=[]; }; codified = derive2 { name="codified"; version="0.2.0"; sha256="1hmw7yrw4qx8v9rkqqvqf4013s9whq5qlgwz7v882j4slpvm6gb1"; depends=[checkmate dplyr kableExtra knitr magrittr readr rlang tibble tidyr]; }; - codingMatrices = derive2 { name="codingMatrices"; version="0.3.2"; sha256="0kldx2h3mksw4644d0ask6ij7i63rrwk0njlsvkbdjz3bf7pdv1b"; depends=[fractional Matrix]; }; + codingMatrices = derive2 { name="codingMatrices"; version="0.3.3"; sha256="0nbx3w016d8rw4pidf72zcw1hf95y7h0rb5ska49nfnjkh3qc0p2"; depends=[fractional Matrix]; }; codyn = derive2 { name="codyn"; version="2.0.5"; sha256="1iqlh3ydnqi7s2b3fa2zgb05j763qgxriys4piawwmgrdrvd3d9q"; depends=[assertthat permute vegan]; }; coefficientalpha = derive2 { name="coefficientalpha"; version="0.7"; sha256="0li1js501sa8m0ba76ymn4lz5y4np7kf96gnxz9kypg50kd58yis"; depends=[lavaan rsem]; }; - coefplot = derive2 { name="coefplot"; version="1.2.6"; sha256="036njf2xwmjvyamanb7nfn2n09ps2rdgk3zrxn6khwp8ly245nps"; depends=[dplyr dygraphs ggplot2 magrittr plyr purrr reshape2 tibble useful]; }; - coenocliner = derive2 { name="coenocliner"; version="0.2-2"; sha256="0r4h0r3av2d1cxmjpwaabjn807626pzqnra2x542wdnnf7h8nmdf"; depends=[]; }; + coefplot = derive2 { name="coefplot"; version="1.2.7"; sha256="1r0izd51vhp7z2lf6z2ddqidy1ik0ziks847ixmhyhgf7hpkmflk"; depends=[dplyr dygraphs ggplot2 magrittr plotly plyr purrr reshape2 tibble useful]; }; + coenocliner = derive2 { name="coenocliner"; version="0.2-3"; sha256="07hik9y84nj1l83spcp1hq9lj960zsg3v0i8rk0xfv25grrakp85"; depends=[]; }; coenoflex = derive2 { name="coenoflex"; version="2.2-0"; sha256="06f75spl4wkbgicm0bksnid2lb1gkvi05915wn5y4km45d82fkkr"; depends=[mgcv]; }; coexist = derive2 { name="coexist"; version="1.0"; sha256="15ydhrx996i6caa0360c2bgn2zvgwfg5wdhsqq1gvrggs15w7nml"; depends=[]; }; cofad = derive2 { name="cofad"; version="0.1.1"; sha256="0c27wfdk98mq0531avlgfxf2wmxcjyg39pgl9i37im7ri2s7kpnr"; depends=[]; }; @@ -6671,30 +6935,31 @@ in with self; { cogmapr = derive2 { name="cogmapr"; version="0.9.1"; sha256="1iz776avw05a0lcna78fycixacby4bjf8ar1jazsf34yss6zka23"; depends=[car dplyr ggplot2 graph magrittr Rgraphviz tidyr]; }; cognitoR = derive2 { name="cognitoR"; version="1.0.2"; sha256="1pz4wk7vdc1nhm76kz912hyyc9c408qsldfr9dygqvran4xvqm9g"; depends=[base64enc config dplyr httr jsonlite paws shiny shinyjs yaml]; }; cohorttools = derive2 { name="cohorttools"; version="0.1.4"; sha256="1zpf3qgzkn34wc36r89ymzfx4fvlgl7x1yiwdwzzd20xv3nx2b5h"; depends=[cmprsk DiagrammeR DiagrammeRsvg Epi ggplot2 rsvg survival]; }; - coil = derive2 { name="coil"; version="1.2.2"; sha256="0shnvk886q9mp2z0cl87s01k5fpkx5ccncx3882wvnk4iyjnaxw9"; depends=[ape aphid seqinr]; }; - coin = derive2 { name="coin"; version="1.3-1"; sha256="0qi03fyqw42a2vnqcia5l2m1mzyarj2q1iblknx9n19bdsd53qjx"; depends=[libcoin matrixStats modeltools multcomp mvtnorm survival]; }; + coil = derive2 { name="coil"; version="1.2.3"; sha256="023sn4waf8wb99ryxf0biag8rfg3j3sslf8fw7d00llzci8px5zj"; depends=[ape aphid seqinr]; }; + coin = derive2 { name="coin"; version="1.4-1"; sha256="15xvhnbyg34aacn6jfz4bsa1f7wq2ci0hslj8mgymql90k50x1qi"; depends=[libcoin matrixStats modeltools multcomp mvtnorm survival]; }; coinmarketcapr = derive2 { name="coinmarketcapr"; version="0.3.2"; sha256="0n62kcw7yxpvxd2bzki432cis5rvfw8b8syfvgv5wpq53bavq3px"; depends=[cli crayon curl data_table ggplot2 jsonlite]; }; cointReg = derive2 { name="cointReg"; version="0.2.0"; sha256="0n4s809avhlrmrjdqzc2s752m7x96c4432gnjd4qv77r2nns7dw4"; depends=[checkmate MASS matrixStats]; }; cointmonitoR = derive2 { name="cointmonitoR"; version="0.1.0"; sha256="0rsacvib9prgb199m5ndi0zlgfsvf1giqc5s41wp0yvxdxjdq5lw"; depends=[cointReg matrixStats]; }; cold = derive2 { name="cold"; version="2.0-1"; sha256="143zmccaiijz4cfiwh1a48h95bqa0ypa9ivv43qkx9y55911a05x"; depends=[cubature MASS]; }; colf = derive2 { name="colf"; version="0.1.3"; sha256="1av82yrp6csw7700ymipd02j73cmzn0apv7ykachjw09nzk86kvj"; depends=[nlsr]; }; collUtils = derive2 { name="collUtils"; version="1.0.5"; sha256="0gbk3lrb2lwq2ixrpcngng6qz6axjb4iyqy5606x1zmjm71c060p"; depends=[Rcpp rJava]; }; + collapse = derive2 { name="collapse"; version="1.5.3"; sha256="18sx6m2d0kykycfbnx4nq1rpcv7yxii165fzgyf404npilddzdnd"; depends=[Rcpp]; }; collapsibleTree = derive2 { name="collapsibleTree"; version="0.1.7"; sha256="0b65pbp1wnpsrayqi630ds4r98jvcvynnlp6wxdqrnnr9nzw5343"; depends=[data_tree htmlwidgets]; }; collectArgs = derive2 { name="collectArgs"; version="0.4.0"; sha256="0fz5w1xsxiddzrwahrg50px4igyhd4plq655jaix6grancs7kvix"; depends=[magrittr]; }; collections = derive2 { name="collections"; version="0.3.5"; sha256="053ig88pva78wxxwya3v7cz853k563dkpgxrf2xvd0l0d9fanxmz"; depends=[]; }; - collector = derive2 { name="collector"; version="0.1.3"; sha256="1yn6gzccdbp7n4qnwqpv66617qldjabzrlww41v6wqn9b7qyr0ii"; depends=[dplyr EnvStats evaluator flextable ggplot2 ggpubr magrittr officer purrr quanteda readr rlang rmarkdown stringr tibble tidyr xaringan]; }; collidr = derive2 { name="collidr"; version="0.1.3"; sha256="18ki8mwf5ihbgfbhdbbk9ljs44js3rqgl1g6g3ch6dynz61sr6hn"; depends=[dplyr jsonlite stringr]; }; + collin = derive2 { name="collin"; version="0.0.1"; sha256="08yg1gdp04l5rxkyvm784n2iqszgb4rlsv3b46n5bzwr334nmsav"; depends=[dlnm MASS mgcv nlme VGAM]; }; collpcm = derive2 { name="collpcm"; version="1.1"; sha256="14rlipdww5sm1ijp2ggpnd23m14qh10zm99cfq1w0kky9jfl0fkn"; depends=[latentnet network vegan]; }; colmozzie = derive2 { name="colmozzie"; version="1.1.1"; sha256="0sn7dqg7rnddnmdb10c6scws6kgi1lz4lw8nc698x63z431ah1p8"; depends=[]; }; coloc = derive2 { name="coloc"; version="3.2-1"; sha256="0sm2mji8bihvcshkh9g18sgbwznhh8j4hip50rk7ckac3vc8y75h"; depends=[BMA data_table ggplot2 reshape snpStats]; }; colocalization = derive2 { name="colocalization"; version="1.0.2"; sha256="0jrrh9nxjl3261rp1fnjfnydpxwpi7v0d20kzd0xc6awf52gydbb"; depends=[ggplot2]; }; colocalized = derive2 { name="colocalized"; version="0.2.0"; sha256="1q98wfqk0p9p92jgjf8liamz6grzwy6h57k7681fm07wfnyr268g"; depends=[doParallel foreach purrr]; }; colocr = derive2 { name="colocr"; version="0.1.1"; sha256="0ijykza6fdmwbr5zbyfjf382anrxh0lb9hlallyawfi6z076fv7j"; depends=[imager magick magrittr scales shiny]; }; - colorBlindness = derive2 { name="colorBlindness"; version="0.1.6"; sha256="18922caddz7c5dj5mbyl7qihgsnk384w31k17rwngm5hckz2d5yi"; depends=[colorspace cowplot ggplot2 gridGraphics gtable]; }; + colorBlindness = derive2 { name="colorBlindness"; version="0.1.9"; sha256="1gzjxvfsj9g07jkcmw04wwzl4rwy16prj4zvsa1mw2zavqindp8h"; depends=[colorspace cowplot ggplot2 gridGraphics gtable]; }; colorDF = derive2 { name="colorDF"; version="0.1.4"; sha256="1q1xfa0h7mbihbv1bpw94rsh6mp4l2v2d2spqwh6r3iy0hf9yk1c"; depends=[crayon purrr]; }; colorRamps = derive2 { name="colorRamps"; version="2.3"; sha256="0shbjh83x1axv4drm5r3dwgbyv70idih8z4wlzjs4hiac2qfl41z"; depends=[]; }; colorSpec = derive2 { name="colorSpec"; version="1.2-1"; sha256="1y6wq4g4rf2carqi387v94502nb5jmw7f6f7grbdzbkixs77bkg2"; depends=[MASS spacesXYZ]; }; - colordistance = derive2 { name="colordistance"; version="1.1.1"; sha256="00bckfwr3kzq91cpd9k2rk2d0wmqjkr05nlfs9937c0wvn7s2xgw"; depends=[abind ape clue emdist gplots jpeg magrittr mgcv plotly png qpdf scales scatterplot3d spatstat]; }; + colordistance = derive2 { name="colordistance"; version="1.1.2"; sha256="14j63anmf4j1lmcd7nyr9k7alhycdkrr5yiar262j8wha68f245n"; depends=[abind ape clue emdist gplots jpeg magrittr mgcv plotly png qpdf scales scatterplot3d spatstat_geom]; }; coloredICA = derive2 { name="coloredICA"; version="1.0.0"; sha256="1xj4dsrwgqzm2644nk3y8nj47m036b4ylh6v60jccj3707spb32r"; depends=[MASS]; }; colorednoise = derive2 { name="colorednoise"; version="1.1.0"; sha256="0x6l9civgqr6lbvdxnhzm30ykx9i6k1q3n6skhnq9b6b52zwrcx4"; depends=[data_table purrr Rcpp RcppArmadillo]; }; colorfindr = derive2 { name="colorfindr"; version="0.1.4"; sha256="175h476dzq1f2x25vdd268xj4ja4lv8fhfj9vld85waqi0sq515g"; depends=[bmp dplyr jpeg magrittr pixmap plotly plotwidgets png purrr rsvg stringr tibble tiff treemap]; }; @@ -6706,63 +6971,62 @@ in with self; { colorpatch = derive2 { name="colorpatch"; version="0.1.2"; sha256="18p9hgccp37pbdf437xffkv6z500896v08fsw2jm8zcl9ladygaf"; depends=[colorspace ggplot2 gridExtra TSP]; }; colorr = derive2 { name="colorr"; version="1.0.0"; sha256="1wwrgb9fc9gzxxwxrdrkwwrmhqqllv29wr4q8y1shj9d3nzcpwmh"; depends=[]; }; colorscience = derive2 { name="colorscience"; version="1.0.8"; sha256="11fy8545g93b8dn2imihsb031lnf5g5z17km8q07q4y6g96xdbdv"; depends=[Hmisc pracma sp]; }; - colorspace = derive2 { name="colorspace"; version="2.0-0"; sha256="13h1hara0s6xn16bgkrbd0flszah1yiylwfwxwn2inqqk6pm6sjf"; depends=[]; }; + colorspace = derive2 { name="colorspace"; version="2.0-1"; sha256="0pj2hji71c18kwwk1pp2fj6s4jl7lm2yn47ls0dqsrsqc3ixsbzq"; depends=[]; }; colortools = derive2 { name="colortools"; version="0.1.5"; sha256="0z9sx0xzfyb5ii6bzhpii10vmmd2vy9vk4wr7cj9a3mkadlyjl63"; depends=[]; }; colourlovers = derive2 { name="colourlovers"; version="0.3.6"; sha256="13fqn6hbqjk3d8krpqb3hmsq06qrbks8a9ia5441hd6m7m8wjjkc"; depends=[httr jsonlite png XML]; }; colourpicker = derive2 { name="colourpicker"; version="1.1.0"; sha256="1qjispj7i12m02js5cm5xlgn5lyff0kc5ybz6lbknz8q5lkbdyrd"; depends=[ggplot2 htmltools htmlwidgets jsonlite miniUI shiny shinyjs]; }; colourvalues = derive2 { name="colourvalues"; version="0.3.7"; sha256="1xpdxqx328l6rjmys7gqrq9pyla7sfmb3xzjrhyksx7i4ncmndpr"; depends=[BH Rcpp]; }; - colourvision = derive2 { name="colourvision"; version="2.0.2"; sha256="15ndhqpp5fi9jgiri9ysl68nf4rdamh9c25svf5nvh2wvv8shrd9"; depends=[Matrix rgl]; }; + colourvision = derive2 { name="colourvision"; version="2.0.3"; sha256="1q933jrglml9bc5djq900fkbsmhvhxqcb55ssi27mv3xqdk5d6d8"; depends=[Matrix]; }; colr = derive2 { name="colr"; version="0.1.900"; sha256="0ilz1y0jd2vgyh81g3dwx2l64sir6z6sgmqx7lnvr1hafsqnwfc8"; depends=[]; }; colt = derive2 { name="colt"; version="0.1.1"; sha256="028jqvgr14ig8jxp8h2lrf7mainzppgqh6v1479qfv4l9is3bnwy"; depends=[crayon]; }; comFuncs = derive2 { name="comFuncs"; version="0.0.5"; sha256="1n17s28rf6jbii8cffzxylp5dr47x4my7chvf2j1zh4vrkml0n1n"; depends=[rstudioapi shiny]; }; - comat = derive2 { name="comat"; version="0.9.0"; sha256="1s9ca06wdwars0manjknl8mpsylcj89zap77plng5k8yzlyshjm1"; depends=[Rcpp RcppArmadillo]; }; + comat = derive2 { name="comat"; version="0.9.1"; sha256="044szmsyjp230mnya5056lnwfjsm607fwhknbdkwx1rbpsm4k0a0"; depends=[Rcpp RcppArmadillo]; }; comato = derive2 { name="comato"; version="1.1"; sha256="0lidwr5vw10655p7q0iqzq3phq5y1i86w3bjdv87cwx3m6333bz6"; depends=[cluster clusterSim gdata igraph lattice Matrix XML]; }; combinat = derive2 { name="combinat"; version="0.0-8"; sha256="1h9hr88gigihc4na7lb5i7rn4az1xa7sb34zvnznaj6pdrmwy4qm"; depends=[]; }; - combinedevents = derive2 { name="combinedevents"; version="0.1.0"; sha256="0y840y5051a9i8jivw1vanigg762axj6disjghq1skpkhkx70178"; depends=[lubridate magrittr rlang stringr]; }; + combinedevents = derive2 { name="combinedevents"; version="0.1.1"; sha256="0fwsxn2ziapax1wy9k57n76z3nxqb22vfbp5r3y6xg3aparxdxpz"; depends=[lubridate magrittr rlang stringr]; }; combiter = derive2 { name="combiter"; version="1.0.3"; sha256="11pcvrpbvkzkjwks2z6ww7s9d5fkh8zl0jw52a5ya3y1wkqcs3n6"; depends=[iterators itertools Rcpp]; }; comclim = derive2 { name="comclim"; version="0.9.5"; sha256="1s6zh16j0q2n7gkvhd4bym9w3hyg4b9n5lpgspqp2nlygdl6jxxb"; depends=[]; }; cometExactTest = derive2 { name="cometExactTest"; version="0.1.5"; sha256="0ar9axm9cd1wd937xcmsmd7xqilnfyab8gsrpkiqpc3fjh86qyrp"; depends=[dplyr]; }; cometr = derive2 { name="cometr"; version="0.2.0"; sha256="0fbg1lfw0q4lfk4svflfwjfmwxbrdvmrvxry90xp39i7g8zd2ahd"; depends=[callr httr jsonlite R_utils R6 yaml]; }; - comf = derive2 { name="comf"; version="0.1.9"; sha256="0n9893nli8rf9g5c9yyqrhbk3xsbvynv1vlpn03i5xs05aj3r88h"; depends=[plyr reshape]; }; - commandr = derive2 { name="commandr"; version="1.0.1"; sha256="1d6cha5wc1nx6jm8jscl7kgvn33xv0yxwjf6h3ar3dfbvi4pp5fk"; depends=[]; }; + comf = derive2 { name="comf"; version="0.1.10"; sha256="0iimah487k6wf9sf4y39ldlm8ww017629bj8115ri9ffp0353g33"; depends=[plyr reshape]; }; commentr = derive2 { name="commentr"; version="1.0.4"; sha256="0anlcbk8rj0yr8i23qmr6v5ws0695nkc3mvgr6pnq1fg2d4c4brj"; depends=[stringr]; }; commonmark = derive2 { name="commonmark"; version="1.7"; sha256="024iz1qp2kv6iz6y69ir0jk3qhjps86rhkzlcmhqsxx97rx7cjni"; depends=[]; }; commonsMath = derive2 { name="commonsMath"; version="1.2.5"; sha256="1c4lgmggpc22mhwcpy521b2pg8wf4bbjp0a6rbcn0aki90xw9ckk"; depends=[]; }; + communication = derive2 { name="communication"; version="0.1"; sha256="08fkllwwcw2llpg5ivxhqghc88qfg1vdy0ciif3xazhhymb8wavb"; depends=[abind diagram GGally ggplot2 gtable gtools igraph magrittr plyr purrr RColorBrewer Rcpp RcppArmadillo reshape2 scales signal tuneR useful wrassp]; }; comorbidity = derive2 { name="comorbidity"; version="0.5.3"; sha256="10zlq1586abngdrw5hgba78ridn3xj4q68f34slxpk0gxwa94n7p"; depends=[checkmate data_table]; }; compHclust = derive2 { name="compHclust"; version="1.0-3"; sha256="0agay7rn5mrw07imz4l547b7m9pfcg3rhz4krfxrvg1q2z2kryvj"; depends=[]; }; compactr = derive2 { name="compactr"; version="0.1"; sha256="0f2yds6inmx0lixj08ibqyd2i61l2cbg1ckgpb8dl2q7kcyyd6mx"; depends=[]; }; comparator = derive2 { name="comparator"; version="0.1.1"; sha256="02j36dm9vg53v224djy6v7jicd1d5sdx148r8qh096zb942wpvp6"; depends=[clue proxy Rcpp]; }; compare = derive2 { name="compare"; version="0.2-6"; sha256="0k9zms930b5dz9gy8414li21wy0zg9x9vp7301v5cvyfi0g7xzgw"; depends=[]; }; compareC = derive2 { name="compareC"; version="1.3.1"; sha256="0dachfr23lps2jj1y5gc958k54vskmww84gdgk4amihsdgjsnphg"; depends=[]; }; - compareDF = derive2 { name="compareDF"; version="2.3.0"; sha256="1phpw7zw6yh4r3b792rpja3bww6niblaqgcmpnfm0aqapmazr4k5"; depends=[data_table dplyr htmlTable magrittr openxlsx stringr tibble tidyr]; }; - compareGroups = derive2 { name="compareGroups"; version="4.4.6"; sha256="0ywj7jgj6shkmjb309k38hzzp23gvrwrhq7mbk6bq0s919fcp8wi"; depends=[chron flextable HardyWeinberg kableExtra knitr officer rmarkdown survival writexl]; }; + compareDF = derive2 { name="compareDF"; version="2.3.1"; sha256="0w77dyy540kcsyfrrxdzr3vma3h56s5n0bf5kib1icwmq3l6dn4v"; depends=[data_table dplyr htmlTable magrittr openxlsx stringr tibble tidyr]; }; + compareGroups = derive2 { name="compareGroups"; version="4.5.1"; sha256="0ll770lj2j6nnjdpkij1wadd2nqppkdjcfglfx13kk5r5ldmfyq1"; depends=[chron flextable HardyWeinberg kableExtra knitr officer rmarkdown survival writexl]; }; compareODM = derive2 { name="compareODM"; version="1.2"; sha256="019hq8j56asjvh4x1p65785mf38xr05j3by0749gl9k9yl8645da"; depends=[XML]; }; - comparer = derive2 { name="comparer"; version="0.2.1"; sha256="1ric6niwx9718qrdkiclmjbrx4vjbg7jwvd6917hihzyjgbsi9fj"; depends=[R6]; }; + comparer = derive2 { name="comparer"; version="0.2.2"; sha256="1rhx9an7qi9r3cv2zpnb9qw0byg06zabg99v51mal218080r6rvm"; depends=[R6]; }; comparison = derive2 { name="comparison"; version="1.0-5"; sha256="0vg8s9j2xjzv7bidd59givxgcqzhdd29q84dj4ww2a6vkmq269r7"; depends=[isotone]; }; compas = derive2 { name="compas"; version="0.1"; sha256="1ckryllwd8avz6456970qhfa3wpcsmhkicnibnv7gl4crzf44xgx"; depends=[bio3d Rcpp RcppEigen]; }; - compboost = derive2 { name="compboost"; version="0.1.0"; sha256="0q7jfj5yc2jvddyyhnzv8fnlmngjfws7cg2blxai76s2fw6bmgxp"; depends=[checkmate glue R6 Rcpp RcppArmadillo]; }; - compendiumdb = derive2 { name="compendiumdb"; version="1.0.3"; sha256="0glaqlzz5wr14yfhka1y7yw5ha6yc4waw61msbz0vkwj5z2hd2hk"; depends=[Biobase GEOquery RMySQL]; }; comperank = derive2 { name="comperank"; version="0.1.1"; sha256="0wz46rkpx1cjjng3i03pms2x27cik9wbx7al5r289ym3664zb83m"; depends=[comperes dplyr Rcpp rlang tibble]; }; comperes = derive2 { name="comperes"; version="0.2.5"; sha256="0pfpbnbnpln3srn2m248v0n72mw72fh0rvqpvswi1qmjcpkfkd7v"; depends=[dplyr magrittr rlang tibble tidyr]; }; competitiontoolbox = derive2 { name="competitiontoolbox"; version="0.1.3"; sha256="0yqrnbg2chyh9idqpiq5v6wc2708a6r4z7vvlwkpnxp19saa8s06"; depends=[antitrust ggplot2 rhandsontable shiny trade]; }; completejourney = derive2 { name="completejourney"; version="1.1.0"; sha256="0ysbpmd7rglz3diy2cpcgvmmcnysradb4ddiwix7kbhzrhvhrdrs"; depends=[curl dplyr progress stringr tibble zeallot]; }; + complexNet = derive2 { name="complexNet"; version="0.1.0"; sha256="0jswxr16j7irjbfc5p5vgdaksh3gs8gyx3cwbs0acrpyykxpi5k7"; depends=[]; }; complexity = derive2 { name="complexity"; version="1.1.1"; sha256="1lpsvry88jpqfw0wkdlwjzkqjl17f4adjcqvq0dwk483mi54xnfk"; depends=[combinat shiny]; }; complexplus = derive2 { name="complexplus"; version="2.1"; sha256="16w9v7d1ckavqmr86l34frr37pkvdn0iqnb17ssb8xaggns5lgqx"; depends=[expm Matrix]; }; complmrob = derive2 { name="complmrob"; version="0.7.0"; sha256="0dvkc5y53041agkjz3rl898hkq686pxzr6flf2qx1g3jbza3pk1y"; depends=[boot ggplot2 robustbase scales]; }; - compositions = derive2 { name="compositions"; version="2.0-0"; sha256="0xsx4n699q2r4pk2jrvifi3wi49lih7d1j3j6qgqqd31brg53jqr"; depends=[bayesm MASS robustbase tensorA]; }; + compositions = derive2 { name="compositions"; version="2.0-1"; sha256="03qslsfx11gshls901zlhw47prd55mf16w4mkmd8x1dgiwq938l4"; depends=[bayesm MASS robustbase tensorA]; }; composits = derive2 { name="composits"; version="0.1.0"; sha256="1j2bbl0p7dhlf18n1164qdbch2qa5nzk66qh4xlrrhr36zip88y4"; depends=[anomalize dobin dplyr fastICA forecast ggplot2 gridExtra ICS kableExtra otsad pracma rlang tibble tidyr tsoutliers]; }; compound_Cox = derive2 { name="compound.Cox"; version="3.20"; sha256="18fgc58jqrjls1rkzrpy338m3yyxaqkv7dfv31a2sf551ynajcfy"; depends=[numDeriv survival]; }; - comprehenr = derive2 { name="comprehenr"; version="0.6.8"; sha256="18gw9ni9cqlkxf6hhgnwankwa09lv8jmzgk7xxs3n0gqd6kbbgw3"; depends=[]; }; + comprehenr = derive2 { name="comprehenr"; version="0.6.10"; sha256="1wlc06swm45nxg9hgik3wj832sr074i3p0j5kxm0i2r74klfy22w"; depends=[]; }; compstatr = derive2 { name="compstatr"; version="0.2.1"; sha256="0pg8yacfb7jvg9xr0gmis8a4g339isd77h6wr8dd6w900q47xac0"; depends=[dplyr fs httr janitor lubridate purrr readr rlang rvest sf stringr tibble tidyr xml2]; }; compute_es = derive2 { name="compute.es"; version="0.2-5"; sha256="00133s3l3g70xrfnxgxhvbjr8izvaj9h0c73iaiyjmlgj84x69m8"; depends=[]; }; comsimitv = derive2 { name="comsimitv"; version="0.1.4"; sha256="1b7yh9rnp7h4642sk0yngqy68iwl2kjzfcidmpy6l8lakfnmshin"; depends=[MASS vegan]; }; comtradr = derive2 { name="comtradr"; version="0.2.2"; sha256="177gnmgwqns65z5y9nw4xp8qmw5z70454zb54jw1879xrgfsrciz"; depends=[httr jsonlite magrittr purrr]; }; con2aqi = derive2 { name="con2aqi"; version="0.1.0"; sha256="1gdd1y6xg26fz199hvryzsnp16qbsz13chqqxyxnkgrai1l72mhf"; depends=[]; }; + con2lki = derive2 { name="con2lki"; version="0.1.0"; sha256="005bk3y7il94h7zlkdjlibm1zm9yplbbzlybdjxmckh67sr6d03x"; depends=[]; }; conStruct = derive2 { name="conStruct"; version="1.0.4"; sha256="1klhzsxrkbz16dnm3r2qxyq2z02zqrps9kij2jy6241ni9qmnn2f"; depends=[BH caroline doParallel foreach gtools Rcpp RcppEigen rstan rstantools StanHeaders]; }; concatenate = derive2 { name="concatenate"; version="1.0.0"; sha256="1kvsw7vwa3hn97ff7r6z21h5ajs74azwv2dk4pzgyaasnbp778hw"; depends=[]; }; concaveman = derive2 { name="concaveman"; version="1.1.0"; sha256="0b3fx3y60ibb73pqx5591jq1n86242qajfxbz3vzz6rxxspddlcz"; depends=[dplyr jsonlite magrittr sf V8]; }; conclust = derive2 { name="conclust"; version="1.1"; sha256="1k9y1mniy7s51dmm5ia693k72s2vxk5bznxxf74s7mx9n3mg2i8r"; depends=[]; }; - concor = derive2 { name="concor"; version="1.0-0.1"; sha256="0hjyvi6p16cyrmq0bq7fph1r5f3adp7zpf123wkm5bkjnc5122k0"; depends=[]; }; concorR = derive2 { name="concorR"; version="0.2.1"; sha256="15pi24xka83p3hm33rfs9vnfkzywmvpz3hpncgqmc9ifwag0zgra"; depends=[igraph sna]; }; concordance = derive2 { name="concordance"; version="2.0.0"; sha256="1xlm0c91bsbij8dr23fh781c6bg8l74kma6x7nnapkpm7jim279x"; depends=[dplyr purrr rlang stringr tibble tidyr]; }; concreg = derive2 { name="concreg"; version="0.7"; sha256="0g4my3ra9p797vcky5hsgcicsdbmczgd8fklxrkw2jrgwc0xrkaf"; depends=[survival]; }; @@ -6786,7 +7050,7 @@ in with self; { confidence = derive2 { name="confidence"; version="1.1-2"; sha256="0m6iz59n5jpi0ig3za3nir4d4bdsysf5g47d2nakfmaz03wk520z"; depends=[ggplot2 knitr markdown plyr xtable]; }; config = derive2 { name="config"; version="0.3.1"; sha256="0l2zp7v6qaz72dclcbjrlis633zlwp8rsi5azr7iw127iyz7i26l"; depends=[yaml]; }; configr = derive2 { name="configr"; version="0.3.5"; sha256="1qlfza9fwqdhw37gxhgxgp4x2dg1qlvdw0rf9fn6a8hgjaj9z8a3"; depends=[glue ini jsonlite RcppTOML stringr yaml]; }; - configural = derive2 { name="configural"; version="0.1.1"; sha256="0xn52lg0fzd0m0k9sw90lv8vzhlp6knaya4crzl6rhfihyv9bq3m"; depends=[cli crayon dplyr stringr]; }; + configural = derive2 { name="configural"; version="0.1.4"; sha256="1vi6xczqlrzhrfv418wlvqiv69kap4awlxkjpgi7b1ix5ayc8mq8"; depends=[]; }; confinterpret = derive2 { name="confinterpret"; version="1.0.0"; sha256="0qldaqpx7kpk71zfwv465jrscwzc9w3xfv52i4h01k9aw3q6m8ja"; depends=[]; }; confintr = derive2 { name="confintr"; version="0.1.1"; sha256="18nkgcpl43hih7l04rxv21pil48h780wjna3vm2763ffkilkk5cl"; depends=[boot]; }; conflicted = derive2 { name="conflicted"; version="1.0.4"; sha256="0xp04cdvmp3b1phazhmjqn0vmax1b2218xsb5854ffv43m7qvrra"; depends=[memoise rlang]; }; @@ -6800,47 +7064,51 @@ in with self; { conjurer = derive2 { name="conjurer"; version="1.2.0"; sha256="05j5y5d7zkv1aq0vcnfxl5l9lgg2z8avfqz8a4fmmgrq29mlblq2"; depends=[]; }; connections = derive2 { name="connections"; version="0.1.1"; sha256="08fbyzyp26nh1a46p0zi3q0wzgl0cd9bjp4lhw2bwv1bv7yayamp"; depends=[DBI dbplyr dplyr pins rscontract uuid]; }; conogive = derive2 { name="conogive"; version="1.0.0"; sha256="0a8v7v0fds0psfnbx9x45way8z1f1xn2ncgbrn5rb6fjq0a1zs4x"; depends=[assertthat checkmate mvtnorm psych]; }; + conos = derive2 { name="conos"; version="1.4.0"; sha256="1kpsxsispsnnvlaak88sxrp1j25zafdgshbb3kh8m1zpxr9pip1s"; depends=[abind ComplexHeatmap cowplot dendextend dplyr ggplot2 ggrepel gridExtra igraph irlba leidenAlg magrittr Matrix Matrix_utils N2R R6 Rcpp RcppArmadillo RcppEigen RcppProgress reshape2 rlang Rtsne sccore]; }; conover_test = derive2 { name="conover.test"; version="1.1.5"; sha256="0f1p10klidk1xic1wd48j9rjh2fb3z6pfjx4y021lglx1w3av68k"; depends=[]; }; conquer = derive2 { name="conquer"; version="1.0.2"; sha256="1zvlsrbmrij011mcdi3qngs1al2lhrdiyknxnk0w1zhzrra62bsl"; depends=[Matrix matrixStats Rcpp RcppArmadillo]; }; conquestr = derive2 { name="conquestr"; version="0.8.5"; sha256="1xh09a379g1msib5fvf72llvf2gwqb7ciacw7j7iqrkb2ddpaglk"; depends=[ggplot2 ggrepel Rcpp reshape rlang stringr]; }; - constants = derive2 { name="constants"; version="1.0.0"; sha256="1j9nj6nbcdi0j278mb49k8jlsb29a7gssdn2pz9vbcrixy9xh5m7"; depends=[]; }; + constants = derive2 { name="constants"; version="1.0.1"; sha256="11nliijwphqphik95b3xpawpjg7w4s089wdhjci5bw4va4bgd1xm"; depends=[]; }; constellation = derive2 { name="constellation"; version="0.2.0"; sha256="1d49rnyf2z3bvx158nsmgmb0x7xcgxl9f8y98pwg5wlqck7af99q"; depends=[data_table]; }; constrainedKriging = derive2 { name="constrainedKriging"; version="0.2.4"; sha256="1a91s0b7yka37fb5pm172fmlqrhm6da370cqb9knvkg5n8vi4hys"; depends=[RandomFields rgeos sp spatialCovariance]; }; - contact = derive2 { name="contact"; version="1.2.5"; sha256="05a6pwrmjlivglq837w4j8nsmadb4qz0mfhnam34r0z0iqyns334"; depends=[ape data_table doParallel foreach igraph lubridate raster rgdal rgeos sp]; }; - contactdata = derive2 { name="contactdata"; version="0.1"; sha256="1rbq6k6m6lvwakxc472wxbsrl6wqm61b81fax7hnmjsrp2grqcnn"; depends=[]; }; + contactdata = derive2 { name="contactdata"; version="0.2.0"; sha256="1hcibqkfisv28d38ymgvmkkbs4jl3lbp2safyd5abf185043263d"; depends=[]; }; container = derive2 { name="container"; version="0.3.0"; sha256="128fj97mx52kap299fmhn3whnaismsd4cq3zqpbfvwxx2ii4fd33"; depends=[R6]; }; - contentid = derive2 { name="contentid"; version="0.0.8"; sha256="1xyp77d7yml5i997xakwcl9r2s4l1ip3fnrzv6mmas0nhdpsvlml"; depends=[curl fs httr openssl rappdirs]; }; + contentid = derive2 { name="contentid"; version="0.0.10"; sha256="0c3w51ma5iarw63pb2byx15ab5wd7h4n7h7as7r8wdlgfxi69d03"; depends=[curl fs httr openssl]; }; contextual = derive2 { name="contextual"; version="0.9.8.4"; sha256="0lww36nymg2cla83jdvl7a42cwn0il20apciz0ddplq8rw2i0a91"; depends=[data_table doParallel foreach Formula iterators itertools R_devices R6 rjson]; }; contfrac = derive2 { name="contfrac"; version="1.1-12"; sha256="0sq5c7ny235yrkv2xc4insgxby6rvzc1qsj8h301cd2if3lwbgwm"; depends=[]; }; conting = derive2 { name="conting"; version="1.7"; sha256="08f271j3gxcp4shda08kkv0v9ayaadvxgcglfsn6hjmw4hn298zg"; depends=[BMS coda gtools mvtnorm tseries]; }; + contingency = derive2 { name="contingency"; version="0.0.6"; sha256="0bwvrwsa41s24j612w4jyhlfp2r6qa37ljsb3lxx27mkd9r0286d"; depends=[rje]; }; contourPlot = derive2 { name="contourPlot"; version="0.2.0"; sha256="0bjwq3p57d6hadln8vwjkh7c9sbb466h3zcq9kpx7kd31z6x8gnz"; depends=[interp RColorBrewer]; }; contoureR = derive2 { name="contoureR"; version="1.0.5"; sha256="1izq1alkf24zd2sf2ir2adyrkwhdj7n89cv6z0dfh5mfqld5bkdn"; depends=[geometry plyr Rcpp reshape]; }; contrast = derive2 { name="contrast"; version="0.22"; sha256="11zz59dn63gpn455ryp0cmrx32li30yylf6ldrmw1wnn0zq702ww"; depends=[nlme rms sandwich]; }; contribution = derive2 { name="contribution"; version="0.2.0"; sha256="0di6jhljdfvzpifnb3pvyn2la5h5r1dw03dx4zhpn4y10dg6898p"; depends=[dplyr ggplot2 gh magrittr rlang tidyr]; }; control = derive2 { name="control"; version="0.2.5"; sha256="02s8h5kwpzfrivx3ign84gwlybkcs03ibawyxdny9zz5yhb7x3bs"; depends=[expm Matrix pracma signal]; }; controlTest = derive2 { name="controlTest"; version="1.1.0"; sha256="19r8nvi35ldzgayifskjj706fv76hv6sj68yvggybp27rgyqbjfl"; depends=[survival]; }; + convdistr = derive2 { name="convdistr"; version="1.5.3"; sha256="1cp2qpyl0jxp0lwznlc94mcigfgysyq9xmi1z7ihd7jxd9mk8aw9"; depends=[dplyr extraDistr ggplot2 MASS pryr RColorBrewer SHELF shiny tidyr]; }; + convergEU = derive2 { name="convergEU"; version="0.5.1"; sha256="1s42ki2shn3nd902gxbbmjch64iaq3iy3c592nq54w5jq5xd43f7"; depends=[broom caTools dplyr eurostat ggplot2 ggpubr purrr rlang rmarkdown stringr tibble tidyr]; }; convertGraph = derive2 { name="convertGraph"; version="0.1"; sha256="1jsrygj6ydzc0nzyzaq95j4blqavj7dqz182vgm1ckv8an3if0jx"; depends=[]; }; convertr = derive2 { name="convertr"; version="0.1"; sha256="1y9aq5in2qv1323amblmq3g22flpqvpkgkrw12kahg56mqf2b3iq"; depends=[DT miniUI rstudioapi shiny]; }; convevol = derive2 { name="convevol"; version="1.3"; sha256="1b0lygbrdm6rqascck5iwjnm248lklc4cxr71qlgand5jsblpcnn"; depends=[ape cluster geiger MASS phytools]; }; convexjlr = derive2 { name="convexjlr"; version="0.8.1"; sha256="1x2ra1xcyd7bvc7wq49wpihh0g9ygh1bq5214vvrhfrjfjifvlaw"; depends=[JuliaCall magrittr]; }; - convey = derive2 { name="convey"; version="0.2.2"; sha256="04sdlm2gzdmmz143iyfhaw0dilhdryq8sgvkxwmfl2s4dagz1y4q"; depends=[survey]; }; - convoSPAT = derive2 { name="convoSPAT"; version="1.2.6"; sha256="17zgrwmlpzir5z8a1blf8r2sblfzbrmbdgy1b73p7l0aayhqmywp"; depends=[ellipse fields MASS plotrix StatMatch]; }; + convey = derive2 { name="convey"; version="0.2.3"; sha256="0b516azyxx4pr0b105zfn9wd9b9s6cfar864pphm6gydn1rkni2a"; depends=[survey]; }; + convoSPAT = derive2 { name="convoSPAT"; version="1.2.7"; sha256="1pmiirigjdkrb3pzqcw6qlh6418z384mvaxqw5mrcm1gxzrqp649"; depends=[ellipse fields MASS plotrix StatMatch]; }; cooccur = derive2 { name="cooccur"; version="1.3"; sha256="1wlaghhi4f3v8kzwhcgq3c6as7v3zlpkzhb232qz1amr7f0058kv"; depends=[ggplot2 gmp reshape2]; }; cooccurNet = derive2 { name="cooccurNet"; version="0.1.6"; sha256="1vqfmvjrxxn977jrry47wn4lag4yi4bkyxwlis3n1ly39kkmyh2j"; depends=[bigmemory doParallel foreach igraph knitr Matrix pryr seqinr]; }; coop = derive2 { name="coop"; version="0.6-2"; sha256="052n2h7yhjj88x87sd3ci9ahhhn5r5rvsm79kh3r2zqbxsr8zzrh"; depends=[]; }; coopProductGame = derive2 { name="coopProductGame"; version="2.0"; sha256="1348pgqfvvysdixsjibgkvwjsmqasnlmwf9kyr39lw8jb81z25h0"; depends=[dplyr GameTheory ggplot2 gtools kappalab lpSolveAPI]; }; cooptrees = derive2 { name="cooptrees"; version="1.0"; sha256="0izvwna1jsqik3v5fz1r4c86irvma42clw0p4rdvwswv5pk698i1"; depends=[gtools igraph optrees]; }; copBasic = derive2 { name="copBasic"; version="2.1.5"; sha256="0p7ngjpfhl4mjrcjmadik2ly5zzyjfafywjmaxza7frgrj6bflf4"; depends=[lmomco randtoolbox]; }; - copCAR = derive2 { name="copCAR"; version="2.0-3"; sha256="1f3i38awcv21ad112ivicr9gn7k6ycz45wl1cdsnrjhi7w6kh9p6"; depends=[mcmcse numDeriv Rcpp RcppArmadillo spam]; }; + copCAR = derive2 { name="copCAR"; version="2.0-4"; sha256="1wvp7khp0f0x6skiq1d6npndb09ak6d6ijmx907gfrd6b0ydaklb"; depends=[mcmcse numDeriv Rcpp RcppArmadillo spam]; }; cope = derive2 { name="cope"; version="0.2.3"; sha256="1r02nb6wy25ixhdcbqqz167s7ny3hydpxfxry5ar4136qvcamgyy"; depends=[abind fields maps MASS Matrix mvtnorm nlme]; }; - copent = derive2 { name="copent"; version="0.1"; sha256="100mkig645gis01w7cbr1hyn7kmiwi5avmwknymimchqwyf026m6"; depends=[]; }; + copent = derive2 { name="copent"; version="0.2"; sha256="0cqq18swjawmn3avbi5v6ihqg3xx9i7qhmxdrm4wk4w6cispc0zb"; depends=[]; }; coppeCosenzaR = derive2 { name="coppeCosenzaR"; version="0.1.3"; sha256="1chwsfyaf5rmlsypr43n7px8b2220dfa5mzcriq1swylgbx4181l"; depends=[]; }; coprimary = derive2 { name="coprimary"; version="1.0"; sha256="0pjln9p5lzv6wl5xrz0kb90hnjlnp7ch2kvh054nxdbmlxv5akc3"; depends=[digest gsDesign plyr proto]; }; - cops = derive2 { name="cops"; version="1.0-2"; sha256="0ifp3cai490lw6dnyyjj4822x8g2mswhaamnw5ljwnxdbmjwhhrw"; depends=[cmaes cordillera crs dfoptim GenSA MASS minqa NlcOptim nloptr pso rgenoud rgl Rsolnp scatterplot3d smacof subplex]; }; + cops = derive2 { name="cops"; version="1.2-0"; sha256="0bw13yhvnq5qw9rgmvf7w3kmygbpx58168rm546x8v155ywccvfx"; depends=[cmaes cordillera crs dfoptim GenSA MASS minqa NlcOptim nloptr pso rgenoud Rsolnp scatterplot3d smacof subplex]; }; copula = derive2 { name="copula"; version="1.0-1"; sha256="0hlpj1xiv21zx52cqmdgxgz05xdsharacalm025y8ybkzk7jr6yh"; depends=[ADGofTest colorspace gsl lattice Matrix mvtnorm numDeriv pcaPP pspline stabledist]; }; copulaData = derive2 { name="copulaData"; version="0.0-1"; sha256="1s917g8wasxndg1xq4b4fjaq29nyzzigpflgqcy4rxdb7r54dl0z"; depends=[]; }; copulaedas = derive2 { name="copulaedas"; version="1.4.3"; sha256="01wp8jnz7kndknj7lh9ia7mm41k1vbaksalyy9v19bb77yhgzmba"; depends=[copula mvtnorm truncnorm vines]; }; - corHMM = derive2 { name="corHMM"; version="2.5"; sha256="04xr9s6950fcgxa0syzvk6dfsj44mf9msnkvd6mw99kfs13gbavw"; depends=[ape corpcor expm GenSA igraph MASS nloptr nnet numDeriv phangorn phytools Rmpfr viridis]; }; + copulareg = derive2 { name="copulareg"; version="0.1.0"; sha256="0wn40rvh2dg60h45qbzy7nwcy2rhrnxf1rykl1ycs75mrimaayn9"; depends=[rvinecopulib]; }; + corHMM = derive2 { name="corHMM"; version="2.6"; sha256="1kydz2nwkjj20i2fn5wfzr10wfh0w6ms6waij53z93nygrqfjvbj"; depends=[ape corpcor expm GenSA igraph MASS nloptr nnet numDeriv phangorn phytools Rmpfr viridis]; }; corTest = derive2 { name="corTest"; version="1.0.7"; sha256="1gip8rxvbhrckwmjwmxbmycndg4jrl75x8qda9l35znfv9r7p0nq"; depends=[Biobase clusterGeneration ggplot2 igraph MASS Matrix]; }; corTools = derive2 { name="corTools"; version="1.0"; sha256="0arvqk2xp19ap73zmdk0kb1fycb3v2mf65b4bhanvcqwr4kg4vdk"; depends=[]; }; cora = derive2 { name="cora"; version="0.1.0"; sha256="0mx7dn05js8hqr3xgrbp2kv25y6qjlm86y6asy17hwbbvbsmama9"; depends=[]; }; @@ -6848,7 +7116,7 @@ in with self; { corclass = derive2 { name="corclass"; version="0.2"; sha256="0hsbbzzadj8yc4zmb88ncx90sfxpyfd9xmdwhb08m1z1jw96zhxp"; depends=[igraph]; }; cord = derive2 { name="cord"; version="0.1.1"; sha256="18xj6cwmx1a7p3vqx5img8qf8s75nc6pcv78v15j081pgn786ma5"; depends=[Rcpp RcppArmadillo]; }; cordillera = derive2 { name="cordillera"; version="0.8-0"; sha256="0cpysfivwmim36gcqn1i7450a33hv4pdbvil7syb0hr7vdm083dd"; depends=[dbscan yesno]; }; - coreCT = derive2 { name="coreCT"; version="1.3.2"; sha256="0xxcgd5qar9fwhyzs5g3fc45naca4xmcgmw88ygav02vv5y93w03"; depends=[igraph oro_dicom plyr raster]; }; + coreCT = derive2 { name="coreCT"; version="1.3.3"; sha256="18id8vf3saj71lxr0i85s9sfhfxmk5x9bihg4m6fz3i9y1akbvq6"; depends=[igraph oro_dicom plyr raster]; }; coreNLP = derive2 { name="coreNLP"; version="0.4-2"; sha256="0rvyqj7s3lijq4rzil65060b29m393m7zmg99mykp1g1kby5bjd8"; depends=[rJava XML]; }; coreSim = derive2 { name="coreSim"; version="0.2.4"; sha256="1fhlss420rhs21l9i2ag5g3j0vnrkpqdh13ca4rwfan6h35qr3sm"; depends=[dplyr MASS]; }; coreTDT = derive2 { name="coreTDT"; version="1.0"; sha256="14rnh61gk3m6g8rq77hm9ybds0px15di2mxm3jiyfdfynx5ng58f"; depends=[]; }; @@ -6856,33 +7124,34 @@ in with self; { corels = derive2 { name="corels"; version="0.0.2"; sha256="0b8fwm2z1jaslg2b0phb4w31qvdp4g91q0jf2dfa6g7gg8lh4crn"; depends=[Rcpp]; }; corkscrew = derive2 { name="corkscrew"; version="1.1"; sha256="1nb81r4lsrajcj3xz3f7p6xznnb38yg3rnnh44rd3kabca4d8r1s"; depends=[ggplot2 gplots igraph RColorBrewer]; }; corlink = derive2 { name="corlink"; version="1.0.0"; sha256="06n9pcvbn8y9gy0mn9c0sw05424ss8smpaw3ly6a785cmj3d9b6m"; depends=[]; }; - cornet = derive2 { name="cornet"; version="0.0.4"; sha256="0chp7ifcc0a9dz6ang4wjiwj7q309g9nsgyql6qmml985d8bazcy"; depends=[glmnet palasso]; }; + corncob = derive2 { name="corncob"; version="0.2.0"; sha256="1q8mznhwfzw9qkxxcvnkln2xxp3mdbdb63c39k6mnpfhr4b10wy3"; depends=[detectseparation dplyr ggplot2 magrittr Matrix numDeriv optimr phyloseq rmutil scales trust VGAM]; }; + cornet = derive2 { name="cornet"; version="0.0.5"; sha256="1r4wkzdclw64g5p5z68gvy6sghxb34y1xzwv751jswbbnj8kynwn"; depends=[glmnet palasso]; }; coro = derive2 { name="coro"; version="1.0.1"; sha256="0r7id3dcf5rlksspsck2vv8jnisvrcc1vnkv6zpr8xh214794n3f"; depends=[rlang]; }; coroICA = derive2 { name="coroICA"; version="1.0.2"; sha256="0pcz2256liczrn2gik8b5331rgzlxjrm7rzn1ialhifkiinifnva"; depends=[MASS]; }; corona = derive2 { name="corona"; version="0.3.0"; sha256="1hggsmvmbim7f6bybmdhxznmqib0k2plm370mjs7dp85i564sjkm"; depends=[gganimate ggplot2 gridExtra plyr qicharts2 reshape2]; }; - coronavirus = derive2 { name="coronavirus"; version="0.3.0"; sha256="0xcyl5b36hj522rgf7469aklrw6ld17jbbf1w3w9cl7x09bhmbck"; depends=[devtools]; }; + coronavirus = derive2 { name="coronavirus"; version="0.3.21"; sha256="00v0ka5lnz6j5nhgyhl9v3mhqaxklzf8yn341a6n02wwbmywh4cs"; depends=[devtools]; }; corpcor = derive2 { name="corpcor"; version="1.6.9"; sha256="1hi3i9d3841snppq1ks5pd8cliq1b4rm4dpsczmfqvwksg8snkrf"; depends=[]; }; corpora = derive2 { name="corpora"; version="0.5"; sha256="0b4yw37msx9h8hf5mjs4h10gdmc1qc2gv5bzyj1r90n4gcli042d"; depends=[]; }; - corporaexplorer = derive2 { name="corporaexplorer"; version="0.8.3"; sha256="0371svq3y92ysnwnlprs1fjfzgy0sm52y2w3wl9ajas1fjnzmi0h"; depends=[data_table dplyr ggplot2 lubridate magrittr padr plyr RColorBrewer rlang rmarkdown scales shiny shinydashboard shinyjs shinyWidgets stringi stringr tibble tidyr]; }; - corpus = derive2 { name="corpus"; version="0.10.1"; sha256="1mcjn6jsrvyxwcf8kx86fy7z0zsarvq6ccja3r27v7b8fjrb8mng"; depends=[utf8]; }; - corpustools = derive2 { name="corpustools"; version="0.4.2"; sha256="00v61i4c43s69mchy5zkbxgvxjx8kqlzm2vcb7snjblmd84w4id5"; depends=[data_table digest igraph Matrix quanteda R6 Rcpp RcppProgress RNewsflow SnowballC stringi tokenbrowser udpipe wordcloud]; }; - corr2D = derive2 { name="corr2D"; version="1.0.0"; sha256="12k6vbqyb33kfj2xdg8rbydnp2yk15kv4b0m4lid4gf2lqmy3jwz"; depends=[colorspace doParallel fields foreach mmand profr rgl xtable]; }; + corporaexplorer = derive2 { name="corporaexplorer"; version="0.8.4"; sha256="0ffickzig9798273gm401ma0lm32zgcd5p549935gfgbyjlxzxps"; depends=[data_table dplyr ggplot2 lubridate magrittr padr plyr RColorBrewer rlang rmarkdown scales shiny shinydashboard shinyjs shinyWidgets stringi stringr tibble tidyr]; }; + corpus = derive2 { name="corpus"; version="0.10.2"; sha256="0fxa38xbd5fyhh0q1ycx8snj7ly8hv9jclbs77agkb6pb6p7yr64"; depends=[utf8]; }; + corpustools = derive2 { name="corpustools"; version="0.4.7"; sha256="1k0lxqa7v6cj772z4bbq8xcv52g7f61gvq3kkg0fvp4rmbl1nzvw"; depends=[data_table digest igraph Matrix pbapply quanteda R6 Rcpp RcppProgress RNewsflow rsyntax SnowballC stringi tokenbrowser udpipe wordcloud]; }; + corr2D = derive2 { name="corr2D"; version="1.0.2"; sha256="1g8vxqbyp162a9jm4dwhyviifddddri585xn42gd6gwfx0vzmaji"; depends=[colorspace doParallel fields foreach mmand profr xtable]; }; corrDNA = derive2 { name="corrDNA"; version="1.0.1"; sha256="1mfjrzpcb63ydyj1yxa0wd3vh4z0rdwsqv09w0a0l4l7mhb5jz2k"; depends=[mvtnorm]; }; corrarray = derive2 { name="corrarray"; version="1.2.0"; sha256="1hsk425xjz9p3wwvia7h78dg24qsr5r977xm2ap5z40ah1bw7bzi"; depends=[Hmisc]; }; corrcoverage = derive2 { name="corrcoverage"; version="1.2.1"; sha256="0r5n2g341jlinwrxxwxkav9i6qsf097pmfi07aiq663b13r3864x"; depends=[data_table magrittr matrixStats Rcpp RcppArmadillo]; }; correctedAUC = derive2 { name="correctedAUC"; version="0.0.3"; sha256="0c2kq7asq5mp48p8niqb84wnw4q2q2985wxbrywrhsszm9p3xspb"; depends=[ICC mnormt]; }; corregp = derive2 { name="corregp"; version="2.0.2"; sha256="1v048dibn2x3y5mi2damcsr9i5kdig5n53g5j9gf31lqkzzjmnh3"; depends=[data_table diagram ellipse gplots rgl]; }; - correlation = derive2 { name="correlation"; version="0.5.0"; sha256="1261kcanamk80ai2zlmjsg7mwzk6r3snivhwxcf9hil8d0sr0j1v"; depends=[bayestestR effectsize insight parameters]; }; + correlation = derive2 { name="correlation"; version="0.6.1"; sha256="1laiqfppl68vnjz1rxb6jvrpxbdgdf3f9bg4k48jkbcn6cvc0v3x"; depends=[bayestestR effectsize insight parameters]; }; correlationfunnel = derive2 { name="correlationfunnel"; version="0.2.0"; sha256="0xil7cihqk7gzpy0q97sg5sw5z0gy7zqvx0f0bizcfks9gwp43cv"; depends=[cli crayon dplyr forcats ggplot2 ggrepel magrittr plotly purrr recipes rlang rstudioapi stringr tibble tidyr]; }; correlbinom = derive2 { name="correlbinom"; version="0.0.1"; sha256="1ix3ccxzr7vqblbda5awsva3h95b69v7kc6adz622bbi8r36xxcq"; depends=[Rmpfr]; }; - corrgram = derive2 { name="corrgram"; version="1.13"; sha256="1g5159vihsz5a2cfmg4g4i1lildn2x2wzck5sd0vml5810rxjpma"; depends=[seriation]; }; + corrgram = derive2 { name="corrgram"; version="1.14"; sha256="12dhvwaprdmzxxk52w8sb3cx99dmzb9yhcm01pri0vcz671p57v1"; depends=[]; }; corrgrapher = derive2 { name="corrgrapher"; version="1.0.4"; sha256="0s10n2av6dyjz6x4wvznpcbvpp63v6k3r9whkqsg7fiy9m3d4dr9"; depends=[ggplot2 htmltools ingredients knitr visNetwork]; }; corrplot = derive2 { name="corrplot"; version="0.84"; sha256="1k03qd8db7pwg1v318xapx5mpiypiz2n07qr19c4b45diri5xkhd"; depends=[]; }; corrr = derive2 { name="corrr"; version="0.4.3"; sha256="096j9y1i1g7wgvn15vpil63cnb24mm0fgklbsgygwwgnlx2j0rgg"; depends=[dplyr ggplot2 ggrepel purrr rlang seriation tibble]; }; corrsieve = derive2 { name="corrsieve"; version="1.6-8"; sha256="0ak3j9khcwv5rxbicck2sr260wpmd3xj254y7pdavx2fk0b72yxs"; depends=[]; }; corset = derive2 { name="corset"; version="0.1-4"; sha256="0ladyqvkys4cldvbhkii9jwn1k5p1ym2g5bgdlz1hq1sv30ixn2f"; depends=[]; }; cort = derive2 { name="cort"; version="0.3.2"; sha256="1iayvgwjmpmb96w5841jxhwivca7s4v5bpsdy0lrbk121saqq5z1"; depends=[furrr nloptr osqp purrr Rcpp Rdpack]; }; - corto = derive2 { name="corto"; version="1.1.3"; sha256="03fvh33qpvkx1pcdjlsjs6dpm8qxajilj3s5q2gxr14nx6f6vzhy"; depends=[dplyr gplots knitr pbapply plotrix rmarkdown]; }; + corto = derive2 { name="corto"; version="1.1.4"; sha256="09bn4sjcxw75mcj2n2ngs87ymmlrlkqsipl1nwxrzdjaw2qswddf"; depends=[dplyr gplots knitr pbapply plotrix rmarkdown]; }; corx = derive2 { name="corx"; version="1.0.6.1"; sha256="179fxjagbq33549zyk234kz9ajbifl7qpmdy0lrw9vzjc8aqbycf"; depends=[clipr crayon ggcorrplot ggplot2 ggpubr glue magrittr moments ppcor psych tidyselect]; }; cosa = derive2 { name="cosa"; version="2.0.0"; sha256="1ra1m75ay829xlhjax82px4ffflnfgh2mrmzzj4i8ml545d9hmgr"; depends=[msm nloptr]; }; cosinor = derive2 { name="cosinor"; version="1.1"; sha256="02nnqg51vq48lzk667cyarnmhcf5mifnsdij7dlgqvz2k4fdq4pl"; depends=[ggplot2 shiny]; }; @@ -6891,19 +7160,19 @@ in with self; { cosso = derive2 { name="cosso"; version="2.1-1"; sha256="1wyq27qak0kz4bbzynm24r5ksvb6ddd43h2ykh6m935xck16blyb"; depends=[glmnet quadprog Rglpk]; }; costat = derive2 { name="costat"; version="2.4"; sha256="0c47bklqjgjmdglw3mi9lvygwjr5w6i1zv91ll3vpnl5dnay0692"; depends=[wavethresh]; }; costsensitive = derive2 { name="costsensitive"; version="0.1.2.10"; sha256="192q55123yzcjjh4047ppxa3h7gk9afqnvm1nlhzs4ccqz71g411"; depends=[]; }; - cotram = derive2 { name="cotram"; version="0.2-0"; sha256="1jp3qmypgbdyilxf3x93pzrw36ha9xd66n8bmv38q4hkhha3z8ar"; depends=[basefun mlt tram variables]; }; + cotram = derive2 { name="cotram"; version="0.2-1"; sha256="0rrr165h72jda42jbxdnrr0qk34g3lp1p0q1cykvvhpzyass4b07"; depends=[basefun mlt tram variables]; }; cotrend = derive2 { name="cotrend"; version="1.0.2"; sha256="17h67vnpnlv11bf3ka5mlnah9bizxjhvicsvbygy91dqbhjhj9wb"; depends=[xts]; }; couchDB = derive2 { name="couchDB"; version="1.4.1"; sha256="1n99amvnsjp88y091603hjsvp243c5i6dbrsvdjfmzgj5dsrv70m"; depends=[bitops httr RCurl rjson]; }; countHMM = derive2 { name="countHMM"; version="0.1.0"; sha256="12z0nz7in2msb5wa5yyjxx19ih8psw06m7xwlapvjksslippp6gs"; depends=[]; }; countToFPKM = derive2 { name="countToFPKM"; version="1.0"; sha256="0h89knii8zkbq0lw7yn3qzak30s7bifq53ga4vy6za6hqwc53x2j"; depends=[circlize ComplexHeatmap]; }; countTransformers = derive2 { name="countTransformers"; version="0.0.6"; sha256="14n2sv7wqzslrzg0ag473ljj9mvha94161p5yh2h9l1vx7xliimf"; depends=[Biobase limma MASS]; }; countcolors = derive2 { name="countcolors"; version="0.9.1"; sha256="1gnwmw3inh8asbk6qba34vzx1k2cnh4m9d1346gxhzhlxvl6xiza"; depends=[colordistance jpeg png]; }; + countdata = derive2 { name="countdata"; version="1.1"; sha256="08aa9pjs8gaw9v3jz7i8f0q3r3x82w261b4if375g5h5vw00bmqv"; depends=[]; }; countfitteR = derive2 { name="countfitteR"; version="1.4"; sha256="1aq7v2fy24pf3r6fkmcwvs18r2xc2l1bqablp53xfc7b6kxq3vqn"; depends=[ggplot2 MASS pscl shiny]; }; countgmifs = derive2 { name="countgmifs"; version="0.0.2"; sha256="0k6fjg0v9n7vi89wd025gdjh1q3l6nnc5yn8i2bfw0i5vmv8rhi3"; depends=[MASS]; }; countrycode = derive2 { name="countrycode"; version="1.2.0"; sha256="0h6x578pci8rch52zan8sxzgwj0c9qpw254zz4pm2gf3vh15giij"; depends=[]; }; countyfloods = derive2 { name="countyfloods"; version="0.1.0"; sha256="0ld8p8dfk9khvwffbn8sad0j3an25s7cvbi6jxljgx4zc6ldh699"; depends=[dataRetrieval dplyr ggplot2 lubridate maps plyr R_utils tidyr]; }; countytimezones = derive2 { name="countytimezones"; version="1.0.0"; sha256="0sk22fmz9d3wvlfvjl1xdavvl04q1ywy8ww2gi5am3yiizkf0v9w"; depends=[dplyr lubridate]; }; - countyweather = derive2 { name="countyweather"; version="0.1.0"; sha256="0q56bnh9x6jyj1sdd1q4yv2n774mbv268pgp285bjybgqm2pyisz"; depends=[dplyr geosphere ggmap ggplot2 lubridate purrr raster rnoaa sp stringi tibble tidyr tigris]; }; covBM = derive2 { name="covBM"; version="0.1.0"; sha256="0ky1lhr8m4hy2ss1nr2xymf6cmj1rr8px8zsxna6bsisf5bq4j4w"; depends=[nlme]; }; covLCA = derive2 { name="covLCA"; version="1.0"; sha256="15jsjrlaws1cqyrwvh4lzbhxkb11jmgpmddg98nfrzmjpczn2iw3"; depends=[Matrix mlogit poLCA]; }; covRobust = derive2 { name="covRobust"; version="1.1-3"; sha256="0zcfala4l0j4w0sx5hlw40vxiypans3d7pgkxy25nj0d2m1jkvba"; depends=[]; }; @@ -6914,17 +7183,19 @@ in with self; { covequal = derive2 { name="covequal"; version="0.1.0"; sha256="1qj6djqf1rnjmnaz1nryj9dc104082w258dzjjp5q18gg1ck8v0c"; depends=[corpcor RMTstat]; }; covfefe = derive2 { name="covfefe"; version="0.1.0"; sha256="178qc77y4bn04qad3g70wr8y4v0ggyg807w67m8wvhbcxqr8yq7c"; depends=[tokenizers]; }; covglasso = derive2 { name="covglasso"; version="1.0.2"; sha256="1aq6x6bq24v1398kzw3ai4arjmma09y2p49wp6k77xsl32nkbhkz"; depends=[Rcpp RcppArmadillo]; }; - covid19_analytics = derive2 { name="covid19.analytics"; version="2.0"; sha256="06clhgx2i235s7zy6v0hiq2qnc9r9sn7b118h4xbcvjfw8wk4z6f"; depends=[ape collapsibleTree deSolve dplyr DT gplots htmlwidgets pheatmap plotly readxl rentrez shiny shinycssloaders shinydashboard]; }; + covid19_analytics = derive2 { name="covid19.analytics"; version="2.1"; sha256="1nh3q7ijb93yamnislklzirysfmm807rqycvcvg1zmvgl10178mk"; depends=[ape collapsibleTree deSolve dplyr DT gplots htmlwidgets pheatmap plotly readxl rentrez shiny shinycssloaders shinydashboard]; }; covid19br = derive2 { name="covid19br"; version="0.1.1"; sha256="1rv4phvqndmjkrgm9q4kink42id95llwcvyimc8jcxdyz7xbs93c"; depends=[data_table dplyr httr lubridate rio rlang tidyr]; }; covid19dbcand = derive2 { name="covid19dbcand"; version="0.1.1"; sha256="0864xixdxzaj697al0c2gq3nk05q1pn0pc9lc2dyki71g5r67i7h"; depends=[]; }; covid19france = derive2 { name="covid19france"; version="0.1.0"; sha256="11072mc794l0m84k2b08zhyfvxf6n6ym91i7kkm3cbirxp6bhnqy"; depends=[dplyr glue lubridate magrittr readr stringr tidyr]; }; covid19italy = derive2 { name="covid19italy"; version="0.3.0"; sha256="1kqvpiy6ib3amx2cpkj99wm5m9y96b5snzyzhhd7qn31mn2l6hnf"; depends=[devtools]; }; - covid19mobility = derive2 { name="covid19mobility"; version="0.1.1"; sha256="1n8w1gkyz98r3svnwksl10ldmmfscyycl81xq9w8497cq6vj4gz1"; depends=[dplyr glue janitor jsonlite lubridate magrittr readr stringi tidyr tigris]; }; - covid19nytimes = derive2 { name="covid19nytimes"; version="0.1.3"; sha256="1j7frjl052pjping5s7cacvfi62i8hdfcmfmvmb02ijhl4gh5dnm"; depends=[dplyr magrittr readr rlang tibble tidyr]; }; + covid19jp = derive2 { name="covid19jp"; version="0.1.0"; sha256="1yrnl83plz3q2bdns28lkyg4yzzw2101bb7gncv8djj97plicsin"; depends=[devtools]; }; covid19sf = derive2 { name="covid19sf"; version="0.1.0"; sha256="02n7v4qv2gw9dnc94hz58nzbfiq1ihf1r3g7vlv8sc826v8qw4bs"; depends=[devtools dplyr lubridate magrittr mapview plotly sf]; }; covid19swiss = derive2 { name="covid19swiss"; version="0.1.0"; sha256="083j4568j7yk7l4qj6097zp0ijq70ycvwvmbfqp3dwazmibamy34"; depends=[devtools]; }; covid19us = derive2 { name="covid19us"; version="0.1.7"; sha256="1gy3cbfq89mg0465n4vwqnknnv988i9l2fv6dara8hr1jysic2n3"; depends=[curl dplyr glue httr lubridate magrittr purrr snakecase stringr tibble tidyr]; }; - covidregionaldata = derive2 { name="covidregionaldata"; version="0.8.2"; sha256="0c5jh2ap95h5snl5yfhg9d3xc75wzw9f2cmll8xp4dbva9hff433"; depends=[countrycode dplyr httr jsonlite lubridate magrittr memoise purrr readr readxl rvest stringr tibble tidyr xml2 yaml]; }; + covidcast = derive2 { name="covidcast"; version="0.4.2"; sha256="1lgpkwhyx8pff2p82w5has1jqmj10kniqd1rkhfxr4b1xp21y8z8"; depends=[dplyr ggplot2 httr MMWRweek purrr rlang sf tidyr]; }; + covidprobability = derive2 { name="covidprobability"; version="0.1.0"; sha256="00kiwxhkbq70650azgd6ylh7w7w4h5l8l7rmr2bijlm05xn3g154"; depends=[]; }; + covidregionaldata = derive2 { name="covidregionaldata"; version="0.9.0"; sha256="1bnh8mvwwn55isd108pwn0pzanyggxf3w4qkaxrxvrd9rx17asca"; depends=[countrycode dplyr httr lifecycle lubridate magrittr memoise purrr R6 readxl rlang rvest stringr tibble tidyr tidyselect vroom withr xml2]; }; + covidsymptom = derive2 { name="covidsymptom"; version="0.9.2"; sha256="00qqllg0p21a2gw9xq57ladlf96kxrmc3yx1kzgd81pxvrxqkk9d"; depends=[]; }; covr = derive2 { name="covr"; version="3.5.1"; sha256="0v5cv3cw2kpdr6wxmkbd3wclavr17zipypdcb10hhmpa4cvgqk55"; depends=[crayon digest httr jsonlite rex withr yaml]; }; covreg = derive2 { name="covreg"; version="1.0"; sha256="0v19yhknklmgl58zhvg4szznb374cdh65i7s8pcj2nwrarycwzaq"; depends=[]; }; covsep = derive2 { name="covsep"; version="1.1.0"; sha256="19dvwhl85yx9ddwxvnq5sdd534s6llcw61gckrav48hq49x1bqld"; depends=[mvtnorm]; }; @@ -6935,7 +7206,7 @@ in with self; { coxed = derive2 { name="coxed"; version="0.3.3"; sha256="09jnqza8wp2palayb0vsz43qmh8470gxil1l7g3b65lmxa7wpmnh"; depends=[dplyr ggplot2 gridExtra mediation mgcv PermAlgo rms survival tidyr]; }; coxinterval = derive2 { name="coxinterval"; version="1.2"; sha256="0vb7vmzbb2dsihx04jbp2yvzcr033g435mywmwimqhfqdrmjx3fi"; depends=[Matrix survival timereg]; }; coxme = derive2 { name="coxme"; version="2.2-16"; sha256="04aid8v0y2afwwbfm39np1pgdla4jw427gy2wazsphf495b4pkm0"; depends=[bdsmatrix Matrix nlme survival]; }; - coxmeg = derive2 { name="coxmeg"; version="1.0.12"; sha256="18h3isgj7p5qvxdqnbjgdsykyy5lvml27rgkzx398571f0m6qrx1"; depends=[coxme MASS Matrix matrixcalc microbenchmark nloptr rARPACK Rcpp RcppEigen SNPRelate]; }; + coxmeg = derive2 { name="coxmeg"; version="1.0.13"; sha256="07lzk2a1hdxibzp4l5v20i1swq6v6hxj5j4dj9pkl1j212g40p6n"; depends=[MASS Matrix matrixcalc microbenchmark nloptr rARPACK Rcpp RcppEigen SeqArray SNPRelate]; }; coxphMIC = derive2 { name="coxphMIC"; version="0.1.0"; sha256="0lmma5wzcczr762xqa4yamvwvyviqxk8gdrps3sydg3n14hckp6d"; depends=[numDeriv survival]; }; coxphSGD = derive2 { name="coxphSGD"; version="0.2.1"; sha256="17ga33v7a89dsygk5yypkz03x7dvjhibnwlvwfvgb2p7djd8w465"; depends=[survival]; }; coxphf = derive2 { name="coxphf"; version="1.13.1"; sha256="06c83v3lrpzm81aclnl1pyqq2kfflbbmcg911blpr7dgynzk0zk5"; depends=[survival]; }; @@ -6951,7 +7222,7 @@ in with self; { cplexAPI = derive2 { name="cplexAPI"; version="1.4.0"; sha256="00h2zir1ffzjiglfyq8bsfmgq9z155jr0k0fxv8fsbfyw2x9dg10"; depends=[]; }; cplm = derive2 { name="cplm"; version="0.7-9"; sha256="057m61rq2hzb55imj3922zmc9kjxh053k3kgy54a4l0jlxb90lyj"; depends=[biglm coda ggplot2 Matrix minqa nlme reshape2 statmod tweedie]; }; cpm = derive2 { name="cpm"; version="2.3"; sha256="07zbvc5jkwv76lkzby6r073fxjsqgnrdl2w9lcph577knnip89jx"; depends=[]; }; - cpp11 = derive2 { name="cpp11"; version="0.2.4"; sha256="08lrmpfkwh1w290a5ikhs9yn1vn32wbgvbzb4n3zb2indb8s5g69"; depends=[]; }; + cpp11 = derive2 { name="cpp11"; version="0.2.7"; sha256="1m31yq3kn5wqvm0ahj08kb4bszbbhfybx3l2x975cjzgv3058h8x"; depends=[]; }; cppRouting = derive2 { name="cppRouting"; version="2.0"; sha256="0yfiyg1clnl85lk5ah8dcchv71drk6r093vpl82xnczyan5z94sr"; depends=[data_table Rcpp RcppParallel RcppProgress]; }; cpr = derive2 { name="cpr"; version="0.2.3"; sha256="1a2lza1bw74xzrs17a9gr9mnpvnnrykhwd73yqi63wp3k4sm42rb"; depends=[dplyr ggplot2 lazyeval lme4 magrittr plot3D Rcpp RcppArmadillo rgl tibble tidyr]; }; cprobit = derive2 { name="cprobit"; version="1.0.2"; sha256="16fnndpkd226paahmadsddakj4yhybw7lp3csr73fwv78zfl2fj9"; depends=[car ggplot2 gridExtra nortest]; }; @@ -6965,6 +7236,7 @@ in with self; { cqcr = derive2 { name="cqcr"; version="0.1.2"; sha256="11bcqr4bw11vjqdgddpfjb4dsk0dxdasddkp1g310l71vw7zaryg"; depends=[anytime dplyr httr jsonlite purrr rlang snakecase]; }; cqrReg = derive2 { name="cqrReg"; version="1.2"; sha256="1sn8pkbqb058lbysdf2y1s734351a91kwbanplyzv3makbbdm4ca"; depends=[quantreg Rcpp RcppArmadillo]; }; cquad = derive2 { name="cquad"; version="2.2"; sha256="18r779w1c5ggm6qigkmwzk7rwm32fvd82zxw82xvzqj1c2akmfpj"; depends=[MASS plm]; }; + cragg = derive2 { name="cragg"; version="0.0.1"; sha256="1iznv72g47r2yd26p1i06a72p8n0albgb4j4l3lndi39wrkrpbwd"; depends=[expm]; }; cramer = derive2 { name="cramer"; version="0.9-3"; sha256="1kdad8nndhics4282gfy9ncllk2kpawdy8ybq71vcd7hc7kf0zq5"; depends=[boot]; }; crandep = derive2 { name="crandep"; version="0.1.1"; sha256="1czv2n4zqmkryvb56pfzczj8m1qan6kq3q4hlm17a8kp3s9kvlcd"; depends=[dplyr igraph Rcpp RcppArmadillo RcppGSL rvest stringr xml2]; }; crank = derive2 { name="crank"; version="1.1-2"; sha256="0wwbdh5sfi2bg13nrlkxxij4k053kjx9afm4gjpgs6iir6pml711"; depends=[]; }; @@ -6974,21 +7246,23 @@ in with self; { crantastic = derive2 { name="crantastic"; version="0.1"; sha256="0y2w9g100llnyw2qwjrib17k2r2q9yws77mf6999c93r8ygzn4f5"; depends=[]; }; crassmat = derive2 { name="crassmat"; version="0.0.6"; sha256="1c4ii34vh8y5b3z2maby4cafb3n2m9bnxv3762cy0z12mbg7zk1s"; depends=[svMisc]; }; crawl = derive2 { name="crawl"; version="2.2.1"; sha256="18mr7vp72jj5msj9mbq45jy3f6qhn45azsmkq07i2d30gwdj0c3a"; depends=[dplyr gdistance lubridate magrittr mvtnorm purrr raster Rcpp RcppArmadillo rmapshaper sf shiny sp tibble]; }; - crayon = derive2 { name="crayon"; version="1.3.4"; sha256="0s7s6vc3ww8pzanpjisym4jjvwcc5pi2qg8srx7jqlz9j3wrnvpw"; depends=[]; }; + crayon = derive2 { name="crayon"; version="1.4.1"; sha256="1ir963s6zk9l32fw257y54p7898cd7z7yazkn9h6j2cdfhpf9dh8"; depends=[]; }; crch = derive2 { name="crch"; version="1.0-4"; sha256="18qjvh1lkw1f6rrhnb21f30xxrcq8whbs3x1jgkw6q14rf1483ri"; depends=[Formula ordinal sandwich scoringRules]; }; credentials = derive2 { name="credentials"; version="1.3.0"; sha256="1w9zj34xdwz9bszsvhv2cbgq96y5sgxbh7ndn31pgfcpzlkfq6f1"; depends=[askpass curl jsonlite openssl sys]; }; - creditmodel = derive2 { name="creditmodel"; version="1.2.7"; sha256="1cskm854ncbh1lxsv6idkilxrhx5gsffkz0jxbk8ppik0q45gpfm"; depends=[cli data_table doParallel dplyr foreach ggplot2 glmnet rpart xgboost]; }; + creditmodel = derive2 { name="creditmodel"; version="1.3.0"; sha256="0cq21y6kzz2gf6kqqkhxlhhkjfm71kx4rqzwwfm1c5572x65x7hm"; depends=[cli data_table doParallel dplyr foreach ggplot2 glmnet rpart xgboost]; }; credsubs = derive2 { name="credsubs"; version="1.1.1"; sha256="19l3vsjxd9lvaf67l61x9l0j4y124p93dfqzw7rl1ya5sxbdzs7a"; depends=[]; }; credule = derive2 { name="credule"; version="0.1.4"; sha256="0kwjjkavch21grx845kdcansaj0g407v7z3wmhy4whra9ic12y76"; depends=[]; }; cregg = derive2 { name="cregg"; version="0.4.0"; sha256="1a34jhdk4r9ywsrc5dc8wq5am3059cli60f6n2n8j04ls13fvlkd"; depends=[ggplot2 ggstance lmtest sandwich scales survey]; }; crfsuite = derive2 { name="crfsuite"; version="0.3.4"; sha256="1003y435hn30wws0ynlla1rz21kh3dp2ggkbyy9vhxgvjzii94n7"; depends=[data_table Rcpp]; }; - cricketr = derive2 { name="cricketr"; version="0.0.23"; sha256="0daxw2rdx4j1b4h557zhqlbbqbzdai5vzy3fal4mp6hgv350d5ks"; depends=[dplyr forecast ggplot2 httr lubridate plotrix scatterplot3d XML]; }; + cricketr = derive2 { name="cricketr"; version="0.0.26"; sha256="1y1zf9f59v95knggq5nna5rp7fqpv1swwvkajwqbpicc12g2azq4"; depends=[dplyr forecast ggplot2 httr lubridate plotrix scatterplot3d XML]; }; crimCV = derive2 { name="crimCV"; version="0.9.6"; sha256="14ckk88i7jk8a7kl51d7qfdis44jng6zz9zd72cdp80a57dvrvzq"; depends=[]; }; crimedata = derive2 { name="crimedata"; version="0.2.0"; sha256="073zlk9b4saz72d33z73mc9qzfk49bxwjhph6zbw27nl38k74j7d"; depends=[digest dplyr httr magrittr purrr readr sf stringr tibble]; }; crimelinkage = derive2 { name="crimelinkage"; version="0.0.4"; sha256="1zzk50kyccvnp51vzp28c9yi23hsp25arrgdn88lwfwa0m43rlar"; depends=[geosphere igraph]; }; - crimeutils = derive2 { name="crimeutils"; version="0.2.0"; sha256="0hhghk4k3j72fxlz9wl9m2yqia9a24y61zp60d1ah0wk29n8blv4"; depends=[dplyr ggplot2 gridExtra gt magrittr scales tidyr]; }; + crimeutils = derive2 { name="crimeutils"; version="0.3.0"; sha256="1g7na36k1na7bsq8xqi01ja2fpb09r2davpi56jn5k1lih93kp8k"; depends=[dplyr ggplot2 gridExtra gt magrittr readr rlang scales tidyr]; }; crisp = derive2 { name="crisp"; version="1.0.0"; sha256="1gs8jnd9y9pd55w6kwv9mvmg3wd8hjiw3lwx7k242pxccsxklfxq"; depends=[MASS Matrix]; }; - crispRdesignR = derive2 { name="crispRdesignR"; version="1.1.5"; sha256="1q2717xnmgq3937skwg8gvj7g4zdld9jyvckmih2b0aazrdhxr9p"; depends=[BiocGenerics Biostrings DT gbm GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors shiny stringr vtreat]; }; + crispRdesignR = derive2 { name="crispRdesignR"; version="1.1.6"; sha256="1h9153iv55qkx9hyf3gs118m99mkzj5mbj6i3jg58chfp0m6jx78"; depends=[BiocGenerics Biostrings DT gbm GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors shiny stringr vtreat]; }; + criticalpath = derive2 { name="criticalpath"; version="0.1.0"; sha256="1b8qid85727j6ai7wmm30g44jzsq8im9i29hw1xas09qky63z1n9"; depends=[igraph R6]; }; + critpath = derive2 { name="critpath"; version="0.1.2"; sha256="0csj17h864qd6f7pra1p19wskdaj9ba7vz7j6hj1zhmb9anzp7rp"; depends=[DiagrammeR ggplot2 reshape2]; }; crmPack = derive2 { name="crmPack"; version="1.0.0"; sha256="11zy1ci9d0zjbmc0gws9j9qrnfcqvky1ws9p41wjn0zifcckc5gi"; depends=[GenSA ggplot2 gridExtra MASS mvtnorm rjags]; }; crmReg = derive2 { name="crmReg"; version="1.0.2"; sha256="0y6xb0sxhsqcmcwbkwvk70snwqhxgzl513ld9dp53cm88qdwaj1r"; depends=[FNN ggplot2 gplots pcaPP plyr robustbase rrcov]; }; crminer = derive2 { name="crminer"; version="0.4.0"; sha256="0yaaj6fxx7rhzcgr6l220qc0n3lf1zlw98m3liq7qw0bcwpnpcrg"; depends=[crul hoardr jsonlite pdftools xml2]; }; @@ -6998,34 +7272,39 @@ in with self; { cromwellDashboard = derive2 { name="cromwellDashboard"; version="0.5.1"; sha256="0d57c1wdd1ds9fr7p256la63qbv8mirljgrvl1k8fp5gcnkps5wb"; depends=[dplyr DT httr shiny shinydashboard stringr]; }; cronR = derive2 { name="cronR"; version="0.4.2"; sha256="0yydm8whwzb3iclg9a8xq0xh4l7vgi6d84r20yvkh6fqzl7vy2nm"; depends=[digest]; }; crone = derive2 { name="crone"; version="0.1.1"; sha256="03qznxml940rl3kfxy4jkg9nsx9ss0gf2ck0ry000xglw6rm2s42"; depends=[]; }; + cronologia = derive2 { name="cronologia"; version="0.2.0"; sha256="143wc9i9d99cybnjzg4dj7jn7sv3cc4bq3hh6mp50j9hwxnr1xhh"; depends=[glue htmltools]; }; crop = derive2 { name="crop"; version="0.0-2"; sha256="1yjpk7584wrz9hjqs21irjnrlnahjg8lajra9yfdp6r927iimg1l"; depends=[]; }; + cropDemand = derive2 { name="cropDemand"; version="1.0.1"; sha256="0h4blvddk2ma3dm1k9r8gl54fg384r214hsx31w1qndwcj7gfpbh"; depends=[dplyr ggplot2 ncdf4 raster rgdal tidyr]; }; + cropZoning = derive2 { name="cropZoning"; version="1.0.1"; sha256="19082p5c322m684fkjcxa1bcmk3vzga2x75lid9zrsrh6knrqsbz"; depends=[ggplot2 ncdf4 raster rgdal tidyr]; }; cropdatape = derive2 { name="cropdatape"; version="1.0.0"; sha256="19bn0apx4p8hnz388zg7sq59qv89vv8k5php317kcv7ai2k2gh34"; depends=[]; }; crossReg = derive2 { name="crossReg"; version="1.0"; sha256="1866jhfnksv9rk89vw7w4gaxi76bxfjvqxx7cfa8nlrcsmaqd7rf"; depends=[]; }; crossdes = derive2 { name="crossdes"; version="1.1-1"; sha256="1d7lv3ibq1rwxx8kc3ia6l9dbz2dxdd5pnf2vhhjmwm448iamcfd"; depends=[AlgDesign gtools]; }; - crossmap = derive2 { name="crossmap"; version="0.2.0"; sha256="1ml48vwk2kff7397135sl19blicc4bn1yh90bsyrhn3vd4wlhzvs"; depends=[purrr rlang]; }; + crossmap = derive2 { name="crossmap"; version="0.3.0"; sha256="0dw1sg1by5805l72s5sbldznyp9qph9qrm4sizvqdx74bhb59s1y"; depends=[backports broom dplyr purrr rlang]; }; crossmatch = derive2 { name="crossmatch"; version="1.3-1"; sha256="082lrv2129mfhwlh99z3g8id3a29s8854skl152bl3ig8pk2gbjz"; depends=[nbpMatching survival]; }; crossrun = derive2 { name="crossrun"; version="0.1.0"; sha256="0br57nraqhs5f1cpidc8kd31izm82wvhiw9pxcdj9v51l9vifbmx"; depends=[Rmpfr]; }; - crosstalk = derive2 { name="crosstalk"; version="1.1.0.1"; sha256="03ihj7cimkklrbad9zic78xsrfcisygmgy859hqnx0hiph80p9rn"; depends=[htmltools jsonlite lazyeval R6]; }; + crosstable = derive2 { name="crosstable"; version="0.2.1"; sha256="185rf1p8sv3z3vf327rr8nd4zaawy95fgs0yi6kr2v3pdcfrz9sd"; depends=[checkmate dplyr ellipsis flextable forcats glue lifecycle nortest officer purrr rlang stringr survival tibble tidyr tidyselect]; }; + crosstalk = derive2 { name="crosstalk"; version="1.1.1"; sha256="1n6c6s7a6yxiwvva71x6bzcrim8xprl5s01fqiy61yq0y3vk8cpd"; depends=[htmltools jsonlite lazyeval R6]; }; crossval = derive2 { name="crossval"; version="1.0.3"; sha256="0acpcisg6pkxblyc4j9hiri58h1rn7ay43p5ib5ia8a4a8bnfa4p"; depends=[]; }; crosswalkr = derive2 { name="crosswalkr"; version="0.2.6"; sha256="1rxd6vy7vdrawmg7zkydl1f2wwklnzgh9dsnxbg966xrr3l9x1n9"; depends=[haven labelled readr readxl tibble]; }; crossword_r = derive2 { name="crossword.r"; version="0.3.6"; sha256="1s31613s4qxxspka9bhgq3rq8xraf48mwfv6phvz6v06gijh64lr"; depends=[dplyr jsonlite magrittr R6 r6extended stringr]; }; crov = derive2 { name="crov"; version="0.2.0"; sha256="1i3a5nagzinsla6p3wjyj3x12gyfqs6vapaqxgr3dh6m727jw5i5"; depends=[gtools VGAM]; }; - crplyr = derive2 { name="crplyr"; version="0.3.6"; sha256="0np4wy1wwkbzn2rq9mpirxzp5idrm2813mmqhflywa5wwlbckwy8"; depends=[crunch dplyr ggplot2 lazyeval lifecycle purrr rlang scales stringr tibble tidyselect viridisLite]; }; + crplyr = derive2 { name="crplyr"; version="0.3.8"; sha256="0vfr8pdxpcmfslv7kn0jhcxjxkhhsqhy729h6v22bazp56zam08v"; depends=[crunch dplyr ggplot2 httptest lazyeval lifecycle purrr rlang scales stringr tibble tidyselect viridisLite]; }; crqa = derive2 { name="crqa"; version="2.0.1"; sha256="04qzg4i3w5wqk1mp9gi90149hfjc7mpqpdwljrafnrv5jfgpjmyi"; depends=[FSA gplots Matrix plot3D pracma rdist tseriesChaos]; }; crrSC = derive2 { name="crrSC"; version="1.1"; sha256="171cw56q2yv1vb4qd0va75i2q89jcw1126q8pcbv0235g7p2a86z"; depends=[survival]; }; crrp = derive2 { name="crrp"; version="1.0"; sha256="1fq54jr6avrli91a4z1hp5img4kghyw1yvjr5xyccsanf9i35x8r"; depends=[cmprsk Matrix survival]; }; crrstep = derive2 { name="crrstep"; version="2015-2.1"; sha256="03vd97prws9gxc7iv3jfzffvlrzhjh0g6kyvclrf87gdnwifyn1z"; depends=[cmprsk]; }; - crs = derive2 { name="crs"; version="0.15-31.1"; sha256="1p16nnxskjf3fdrdm5y1n5zj0acyrmc73ff75rgry1b1fd4yk61x"; depends=[boot np quantreg rgl]; }; - crseEventStudy = derive2 { name="crseEventStudy"; version="1.2"; sha256="1fgjj78p54fk0bkvx0fq1h7c5j4c64g10cdjzmmqhhxlyjwp5z7y"; depends=[sandwich]; }; + crs = derive2 { name="crs"; version="0.15-33"; sha256="0zzi3l35r4slq5iplgds4pkw4nf5594i5cwp4jrz5rbncw2vp19a"; depends=[boot np quantreg]; }; + crseEventStudy = derive2 { name="crseEventStudy"; version="1.2.1"; sha256="1nw96h23zyfybxzlwnkcn5rskjpbd3qgldizngxwgpaqkmkgm880"; depends=[sandwich]; }; crsmeta = derive2 { name="crsmeta"; version="0.3.0"; sha256="19v0bq80cma74jjl0k42pmlpd5jfv6b0hr7j2iq0d47h50pvrd02"; depends=[]; }; crsnls = derive2 { name="crsnls"; version="0.2"; sha256="0rv0xrdl9ix6bhaf554gma8zf923w47f8j1dkbs8g6xjqjr1c40a"; depends=[]; }; crso = derive2 { name="crso"; version="0.1.1"; sha256="1r10vz8z5y52a5v5phw22fhqwv9p7g66xfsx0906bcx74dn3f2b3"; depends=[foreach]; }; crsra = derive2 { name="crsra"; version="0.2.3"; sha256="1rkqm88zmvp9gw442cby6qpvfw4pfw65wz0gyl2h37w87c3wwvrw"; depends=[digest dplyr knitr purrr rcorpora readr tibble tidytext]; }; crtests = derive2 { name="crtests"; version="0.2.1"; sha256="0z8idz37dgwvi1q2vryldii7fn9yxd32gds77ml76jfplxbkikpd"; depends=[caret plyr stringr]; }; - crul = derive2 { name="crul"; version="1.0.0"; sha256="09qhvcn67f7sv48avj9m5a06yzckz56qsss9m062v6zqdh7m1pia"; depends=[curl httpcode jsonlite mime R6 urltools]; }; - crunch = derive2 { name="crunch"; version="1.27.5"; sha256="1vklp4wkk04k945rd2s9in8w0g3y02jqb2m85nv5ks903bmswzg8"; depends=[crayon curl httpcache httr jsonlite]; }; - crunchy = derive2 { name="crunchy"; version="0.3.2"; sha256="1igrfjrvp60hxcsjf1hzfsnbm7ji478p2zfp8nzqi0ybpirrrcz3"; depends=[crunch httpcache miniUI rstudioapi shiny]; }; + crul = derive2 { name="crul"; version="1.1.0"; sha256="1kjsc5gkx5k5cfwlfjp2cjm9cdzq2l1m68bnrjmahw3lkz8wzdph"; depends=[curl httpcode jsonlite mime R6 urltools]; }; + crunch = derive2 { name="crunch"; version="1.28.0"; sha256="140midzj80y9a46ixi6hn836s5g8bi4kds5sgrk4az79mh9lxwk0"; depends=[abind crayon curl httpcache httr jsonlite]; }; + crunchy = derive2 { name="crunchy"; version="0.3.3"; sha256="15w72kmizsxkj1wx3nqny6329m2041mxyzi4nxh8l3hfmaisb4qm"; depends=[crunch httpcache miniUI rstudioapi shiny]; }; cruts = derive2 { name="cruts"; version="1.1"; sha256="1ih6h9qk4yflzars00d61smjqj7s4bfvc2ikp6vlki9f6k012xcx"; depends=[lubridate ncdf4 raster sp stringr]; }; + cry = derive2 { name="cry"; version="0.4.1"; sha256="14wicmlg8vzrqv4wf5xzf37l29ch3cbglbanmgbqdi8p49jpw1cf"; depends=[zoo]; }; cryst = derive2 { name="cryst"; version="0.1.0"; sha256="04da19dy3mkngd3ma44cd8cdkb5acjy9lbhfipa9flp339j1pp57"; depends=[flux pracma]; }; csSAM = derive2 { name="csSAM"; version="1.2.4"; sha256="1ms8w4v5m9cxs9amqyljc2hr1178cz6pbhmv7iiq9yj1ijnl4r1x"; depends=[]; }; csa = derive2 { name="csa"; version="0.7.0"; sha256="0cmabcvfxfplnzx7mdsfas3jhgz44y86411amaphm75zmv8khcif"; depends=[data_table doParallel foreach ggplot2 ggpubr Lmoments moments raster reshape2 scales]; }; @@ -7035,10 +7314,9 @@ in with self; { cshapes = derive2 { name="cshapes"; version="0.6"; sha256="0mp6grkibmqk4k1yi4w2sglpp9ari5cfw4iip49a0z58qa98npw7"; depends=[maptools plyr sp]; }; csn = derive2 { name="csn"; version="1.1.3"; sha256="102w1qh9hgz4j9lh5hnbw1z3b7p034si73q4pkk564a2mhzlksw4"; depends=[mvtnorm]; }; csodata = derive2 { name="csodata"; version="1.1.1"; sha256="0h43psxas3js43p0qpvw225cxxfr444d91y282jvi7d9cs8mkxfg"; depends=[dplyr httr jsonlite R_cache reshape2 rjstat sf]; }; - csp = derive2 { name="csp"; version="0.1.0"; sha256="1pc5mcn9difpp4cmfb0a8pqhbpkfakxjkbr7bpqmfiwcfk8rzr1h"; depends=[]; }; cspec = derive2 { name="cspec"; version="0.1.2"; sha256="049vynbffxyd5zwxwyz1jv05zgq7zrx1ypzv5j62ph64gl42m13p"; depends=[]; }; - cspp = derive2 { name="cspp"; version="0.3.0"; sha256="06cn3x7m48kqs9av9m8rsifrl00q764bb63szfsxqwcng29p08x5"; depends=[dplyr ggplot2 haven mapproj purrr readr rlang stringr tidyselect]; }; - csppData = derive2 { name="csppData"; version="0.1.1"; sha256="0qj109r1f9phxkcw7zcsmz9d20zr86mdmiqkyb2g2pg7ywwd4lgw"; depends=[]; }; + cspp = derive2 { name="cspp"; version="0.3.1"; sha256="17zcf91wcvc5lq1vw24jf4dripnbv19lq4pch09livlyi9xjrx2p"; depends=[csppData dplyr ggplot2 haven mapproj purrr readr rlang stringr tidyselect]; }; + csppData = derive2 { name="csppData"; version="0.1.2"; sha256="1xfwrrs0jgisrxk5j06a2nniml8w8fvjcq30in1vg23svix21zlk"; depends=[]; }; csrplus = derive2 { name="csrplus"; version="1.03-0"; sha256="0kljndmiwblsvvdnxfywida9k0dmdwjq63d934l5yl6z7k4zd0xa"; depends=[sp]; }; cssTools = derive2 { name="cssTools"; version="1.0"; sha256="1p8c21c1hilmd9ibqyz493fy1x95hb2pidybsyicch53gkb542br"; depends=[sna]; }; cstab = derive2 { name="cstab"; version="0.2-2"; sha256="1lr401fvi88f4jv8jh4brx95ymncfw8clripz1r6a46inj80nj4j"; depends=[cluster fastcluster Rcpp]; }; @@ -7053,12 +7331,12 @@ in with self; { ctmcd = derive2 { name="ctmcd"; version="1.4.1"; sha256="01nflgdyb70kh4f8bnxpavr31fz4fh02kgz2nlx3zzblnm2idbcx"; depends=[coda expm numDeriv Rcpp RcppArmadillo]; }; ctmcmove = derive2 { name="ctmcmove"; version="1.2.9"; sha256="1pxyxbbhfa8arqfb7qw10ya1b8hy9ylqbqqzys6d9dsixvdk98h0"; depends=[fda gdistance Matrix raster sp]; }; ctmle = derive2 { name="ctmle"; version="0.1.2"; sha256="0qc1ji8fjpr88dn6mrpijfcx1ij4zkrxsbcw405hxal7rli0gyp3"; depends=[glmnet SuperLearner tmle]; }; - ctmm = derive2 { name="ctmm"; version="0.5.10"; sha256="0rxcq3nb3b5p21wjbcranxjj4zas31lm293lv6bb26av2mlhc8xj"; depends=[data_table digest expm fasttime Gmedian gsl manipulate MASS numDeriv pbivnorm pracma raster rgdal shape sp]; }; - ctqr = derive2 { name="ctqr"; version="1.1"; sha256="1iv6mms7p0xca91mpj61cj8kxv2bwqrpvwdsbx2lk6hgys8g70y2"; depends=[pch survival]; }; - ctrdata = derive2 { name="ctrdata"; version="1.4.1"; sha256="1aijks80gaz5s4h5b32izk6n38payhypichy3k3pzc6zx388hl79"; depends=[clipr curl httr jsonlite nodbi rvest xml2]; }; + ctmm = derive2 { name="ctmm"; version="0.6.0"; sha256="0z0dg4kd2w2jk6xmr9w2q78d6zky5mn3pp0bk71084q00hxfqbc9"; depends=[Bessel data_table digest expm fasttime Gmedian gsl manipulate MASS numDeriv pbivnorm pracma raster rgdal shape sp statmod]; }; + ctqr = derive2 { name="ctqr"; version="2.0"; sha256="0srrlgqxpp4a46wqr83zpb3xr49pf70b0n8bv9qp8ffak20d2hpj"; depends=[pch survival]; }; + ctrdata = derive2 { name="ctrdata"; version="1.5.3"; sha256="108j6k8mnnmw4jxrqzdykb7d78pck33wzaz6vvg3q4nyhdddjvln"; depends=[clipr curl DBI httr jsonlite nodbi rvest stringi xml2]; }; ctrlGene = derive2 { name="ctrlGene"; version="1.0.1"; sha256="0x7j11v7jj4k1jml6lrnjq79awhrvsm3pig1yxsd337jlfml3ra9"; depends=[psych]; }; - ctsem = derive2 { name="ctsem"; version="3.4.1"; sha256="06awy3dr7cwkd25fgxwd68pyvqfsz888fgia5kp2y0m34rhj0isi"; depends=[BH cOde data_table Deriv expm ggplot2 MASS Matrix mize mvtnorm pkgbuild plyr Rcpp RcppEigen RcppParallel rstan StanHeaders tibble]; }; - ctsemOMX = derive2 { name="ctsemOMX"; version="1.0.2"; sha256="1ln0ns2ff054m0zak0f6gbpa1q2zq2vpsf0zpd99m4m26ws1gzyw"; depends=[ctsem Matrix OpenMx plyr]; }; + ctsem = derive2 { name="ctsem"; version="3.4.3"; sha256="0km7d1jlpvzap80fzqj0v639vzwrjkayg06l9nh4lwx24drq1hzv"; depends=[BH cOde data_table Deriv expm ggplot2 MASS Matrix mize mvtnorm pkgbuild plyr Rcpp RcppEigen RcppParallel rstan StanHeaders tibble]; }; + ctsemOMX = derive2 { name="ctsemOMX"; version="1.0.3"; sha256="1va9p3c4f4m61ny9c8wlvsz045k1ara4j4wsi7w1ywrjjmqczjw6"; depends=[ctsem Matrix OpenMx plyr]; }; ctv = derive2 { name="ctv"; version="0.8-5"; sha256="0kl6z8dbbjgm29q0c5xy6lihjgf5cdihrllm27x0zbcvy8lyl51p"; depends=[]; }; cuRe = derive2 { name="cuRe"; version="1.0.1"; sha256="0vw2iv9inz8md7lz6f1p456wxjc07kap1mvqf58hixqxbrb23dgi"; depends=[date numDeriv relsurv rstpm2 statmod survival]; }; cubature = derive2 { name="cubature"; version="2.0.4.1"; sha256="006la36gxdikvmdnq4ny7ik7r30id4z3b3fqsl57dpqwkpsbsgrq"; depends=[Rcpp]; }; @@ -7071,24 +7349,26 @@ in with self; { cumplyr = derive2 { name="cumplyr"; version="0.1-1"; sha256="07sz1wryl3kxbk67qyvnkrkdrp4virlsaia0y6rf9bqdw7rc6vi2"; depends=[]; }; cumstats = derive2 { name="cumstats"; version="1.0"; sha256="119w751z9dg6pjyk389pbl8ab8pirf9sqndi4nxi89ix2bby4xz8"; depends=[]; }; cumulocityr = derive2 { name="cumulocityr"; version="0.1.0"; sha256="0ybvh5args3s1f3nra58bnfwgrlrdpw40by68az84s90v88bbz2q"; depends=[httr jsonlite]; }; + cuperdec = derive2 { name="cuperdec"; version="1.0.0"; sha256="065j9l18bq8rdxqkrp1v9bl21jc66pa7skds13xrjsp8a0r7vkmk"; depends=[dplyr ggplot2 magrittr readr rlang tidyr]; }; curephEM = derive2 { name="curephEM"; version="0.1.6"; sha256="18lr4fq7nim9axxg9kvivgs3hvmkqnp15sn30vqdbl545a4h78yy"; depends=[Matrix survival]; }; - curl = derive2 { name="curl"; version="4.3"; sha256="1nrf6md41b37j424y6rvifdj9zb3j14f60fj7q71k9jhpf2x81kl"; depends=[]; }; + curl = derive2 { name="curl"; version="4.3.1"; sha256="0qpzbzd5xvihqvp9akkvd8237i1lmphmm5q8a4cj3wfx382cnri2"; depends=[]; }; currentSurvival = derive2 { name="currentSurvival"; version="1.0"; sha256="0bqpfwf4v4pb024a98qwg81m6zd7ljg1ps42ifhxpqx7b9gdyi6c"; depends=[cmprsk survival]; }; curry = derive2 { name="curry"; version="0.1.1"; sha256="1ps9hvbnb02m0b8hlw4admwbziyjvswj08ldi2dk3ymnrpawcc29"; depends=[]; }; + cursr = derive2 { name="cursr"; version="0.1.0"; sha256="08051bnxags2arn296mxwc84j55shhsfym9hd062amdvm23nxd18"; depends=[keypress]; }; curstatCI = derive2 { name="curstatCI"; version="0.1.1"; sha256="0igqdv0fzzji10gz3j3ir8qxpy7vdjfl137067rc28qzbrl2sy2c"; depends=[Rcpp]; }; curvHDR = derive2 { name="curvHDR"; version="1.2-1"; sha256="1a6b29kklyphv9iirm8xaxcdfcssk7ah4wm9ll53ls0alnzb15nw"; depends=[feature geometry hdrcde KernSmooth ks misc3d ptinpoly rgl]; }; curveDepth = derive2 { name="curveDepth"; version="0.1.0.9"; sha256="10mhy2nyll4d1q71qnlsal0raccz3awd0j0vi5w58di9wlv1c241"; depends=[ddalpha Rcpp RcppArmadillo]; }; curvecomp = derive2 { name="curvecomp"; version="0.1.0"; sha256="0ykgbwnh32w61cjcg1nyqak42hx0jrsrpbra2wh3pgj9clg1qad2"; depends=[multcomp]; }; cusp = derive2 { name="cusp"; version="2.3.3"; sha256="130m0is48bp11p5fpg17lwqwlavsa8fzfxjs0z62vl6lm006aahw"; depends=[]; }; - customLayout = derive2 { name="customLayout"; version="0.3.1"; sha256="1ijdg03l170q3c87y0kwjhls87ywl0wpvppw7rbswj2f1xs3jzq9"; depends=[assertthat flextable gridExtra officer RColorBrewer rvg]; }; customizedTraining = derive2 { name="customizedTraining"; version="1.2"; sha256="0kjp22bzv7a3xynhm9xmabfcms21586p8caz1nk1w88qdvidqfqd"; depends=[FNN glmnet]; }; customsteps = derive2 { name="customsteps"; version="0.7.1.0"; sha256="1v6ks8j1mj623yai515xnrpx60hvilbrsn59r3zw30n68555cvw8"; depends=[dplyr generics magrittr purrr recipes rlang tibble tidyselect]; }; cusum = derive2 { name="cusum"; version="0.4.1"; sha256="0vjq3slkjdgls41xm637xkrg8jhv6y75xiyfcgpwrp32ixmakpcd"; depends=[checkmate data_table Rcpp]; }; cutoff = derive2 { name="cutoff"; version="1.3"; sha256="0anrvmlvcxah620il3fkq6ldp7hx4nwdnzcpmfc5mhlsry0lp178"; depends=[do ROCit set survival]; }; cutoffR = derive2 { name="cutoffR"; version="1.0"; sha256="1801jylmpp4msyf07rhg4153kky1zvi4v0kkjb9d51dc7zkhh531"; depends=[ggplot2 reshape2]; }; - cutpointr = derive2 { name="cutpointr"; version="1.0.32"; sha256="1xb5dwbhax0ijmxpzzkzaa8s2hndgln4820lij6fm251vfp5qy0s"; depends=[dplyr foreach ggplot2 gridExtra purrr Rcpp rlang tibble tidyr]; }; + cutpointr = derive2 { name="cutpointr"; version="1.1.0"; sha256="1qaz7kjvpy0by5hxdbpslnq7ivs9jr825hbgiz0ack3h9ks6akl2"; depends=[dplyr foreach ggplot2 gridExtra purrr Rcpp rlang tibble tidyr tidyselect]; }; cuttlefish_model = derive2 { name="cuttlefish.model"; version="1.0"; sha256="1rmkfyfd1323g2ymd5gi1aksp160cwy5ha5cjqh5r6fzd8hhqjxs"; depends=[]; }; cvAUC = derive2 { name="cvAUC"; version="1.1.0"; sha256="13bk97l5nn97h85iz93zxazhr63n21nwyrpnl856as9qp59yvn64"; depends=[data_table ROCR]; }; + cvCovEst = derive2 { name="cvCovEst"; version="0.3.5"; sha256="0l2s95djlh90qk7s6940fafcqfcrdqxv05g60nnbz6hn2lj2svgj"; depends=[assertthat coop dplyr ggplot2 ggpubr Matrix matrixStats origami purrr RColorBrewer Rdpack rlang RSpectra stringr tibble]; }; cvGEE = derive2 { name="cvGEE"; version="0.3-0"; sha256="085qjm520l2441nakfxy851s6bfy5832b5fy54z5fp4xr1jn6snm"; depends=[]; }; cvTools = derive2 { name="cvTools"; version="0.3.2"; sha256="0b7xb6dmhqbvz32zyfbdvm9zjyc59snic6wp1r21ina48hchn3sj"; depends=[lattice robustbase]; }; cvar = derive2 { name="cvar"; version="0.4-0"; sha256="1rfsmw2a639pkj8l5g2xm6z48jrxsywbysk7c0czpdvrh4h9h84f"; depends=[fGarch gbutils Rdpack]; }; @@ -7096,14 +7376,13 @@ in with self; { cvcrand = derive2 { name="cvcrand"; version="0.1.0"; sha256="0zdf41sjqyi7mybxhypfx1vpc15w7qj9jg9bav64qbk0q5nk7jyc"; depends=[tableone]; }; cvequality = derive2 { name="cvequality"; version="0.2.0"; sha256="1im839vzfqylphp2vr20avnzkyl02n88fngbs63d4ik7c72d9992"; depends=[]; }; cvmdisc = derive2 { name="cvmdisc"; version="0.1.0"; sha256="19b9kxqgbk1d631l3jph87pzhk4zf3xd5q5j2xsrbqz8zmm96sn9"; depends=[CompQuadForm]; }; - cvmgof = derive2 { name="cvmgof"; version="1.0.0"; sha256="0rnd7icqjprhbpmn383ah4fi5nz0hmg88fa612fmivkvnpn79v6j"; depends=[lattice]; }; - cvms = derive2 { name="cvms"; version="1.2.0"; sha256="1axc2gjscsi2mf6dqdwii7b9p46viq4jyv2vghdb3fs5vx7jqy4a"; depends=[broom broom_mixed checkmate data_table dplyr ggplot2 lifecycle lme4 MuMIn plyr pROC purrr recipes rlang stringr tibble tidyr]; }; + cvmgof = derive2 { name="cvmgof"; version="1.0.3"; sha256="0s78w8ivxzscn6jbwsw0m15n3xwgbbjdqwpp4dsy3gi0nsmngjyc"; depends=[lattice]; }; + cvms = derive2 { name="cvms"; version="1.2.1"; sha256="02rjr5hi4dly4vxj0vi49ml8x5isniaj61cdj6rxhy9b75bkb20i"; depends=[broom broom_mixed checkmate data_table dplyr ggplot2 lifecycle lme4 MuMIn plyr pROC purrr recipes rlang stringr tibble tidyr]; }; cvq2 = derive2 { name="cvq2"; version="1.2.0"; sha256="19k95xg2y3wd4mx3wvbrc1invybd446g13vsp3dv05nw2kx4f6w8"; depends=[]; }; - cvxbiclustr = derive2 { name="cvxbiclustr"; version="0.0.1"; sha256="00k75zy8v6qd5fg0h258i5z8ljjkfgkxz45cspysl1ap89d5n7df"; depends=[igraph Matrix]; }; - cwbtools = derive2 { name="cwbtools"; version="0.3.1"; sha256="1q8mim1k5fbf23d506wg82f9i578jy99kzkhvydibb5apri77d7n"; depends=[cli curl data_table jsonlite pbapply R6 RcppCWB RCurl rstudioapi stringi xml2 zen4R]; }; cwhmisc = derive2 { name="cwhmisc"; version="6.6"; sha256="1pf365g4f51cfrhlff9mqw2ddvkps0abax17zcn3vw1ba2djalnp"; depends=[lattice]; }; cwm = derive2 { name="cwm"; version="0.0.3"; sha256="1ln2l12whjhc2gx38hkf3xx26w5vz7m377kv67irh6rrywqqsyxn"; depends=[MASS matlab permute]; }; cxhull = derive2 { name="cxhull"; version="0.2.0"; sha256="1m03ym83ghgmb0j14aihfj6divmnr13f5s9jwknicjsxz3p3divk"; depends=[]; }; + cxr = derive2 { name="cxr"; version="1.0.0"; sha256="12rx7hna3h84a2xb2ir43xgb3zfmh0fhn5wcdjklk2g94dmwid28"; depends=[mvtnorm optimx]; }; cxxfunplus = derive2 { name="cxxfunplus"; version="1.0"; sha256="0kyy5shgkn7wikjdqrxlbpfl3zkkv4v1p8a1vv0xkncwarjs4n8d"; depends=[inline]; }; cycleRtools = derive2 { name="cycleRtools"; version="1.1.1"; sha256="1l7w2lm4s149ndd85v41pkdrdig6l3nmhl14bdx56aw8q57fxmb0"; depends=[Rcpp xml2]; }; cyclestreets = derive2 { name="cyclestreets"; version="0.3.0"; sha256="1hkmibl8dv99q6dl6xvzvjm96g4b9v364mbdffrxm6ncvzg6rfri"; depends=[geodist httr jsonlite magrittr sf stringr]; }; @@ -7119,7 +7398,7 @@ in with self; { cytometree = derive2 { name="cytometree"; version="2.0.2"; sha256="18g7av73lmnyga1kk24bf8jy599zn9n6qhr13mxsqgi0zdinicfa"; depends=[cowplot ggplot2 GoFKernel igraph mclust Rcpp RcppArmadillo]; }; cytominer = derive2 { name="cytominer"; version="0.2.2"; sha256="1n9yimjhdziv1vzjyni6ssi38nxcnfr5jpmzgxcn6vysffh5s9pz"; depends=[caret doParallel dplyr foreach futile_logger magrittr Matrix purrr rlang tibble tidyr]; }; czechrates = derive2 { name="czechrates"; version="0.1.10"; sha256="0xxp61bgb2knc0cnab0c3iq92i251iic9awih557phyljb1f2z8p"; depends=[curl dplyr httr magrittr readr tibble]; }; - czso = derive2 { name="czso"; version="0.3.2"; sha256="0f47b8xgkm0w35xxzkwb708ql6rx6ay99njyc6yjvhqfcgybxq30"; depends=[curl dplyr httr jsonlite lifecycle magrittr readr rlang stringi stringr tibble usethis]; }; + czso = derive2 { name="czso"; version="0.3.4"; sha256="1aiwly7426mx8yvp30w2jf88hv5a7k1qgbcxvka33mzpm3c8gzgs"; depends=[curl dplyr httr jsonlite lifecycle magrittr readr rlang stringi stringr tibble usethis]; }; d3Network = derive2 { name="d3Network"; version="0.5.2.1"; sha256="1gh979z9wksyxxxdzlfzibn0ysvf6h1ij7vwpd55fvbwr308syaw"; depends=[plyr rjson whisker]; }; d3Tree = derive2 { name="d3Tree"; version="0.2.2"; sha256="142bc6gdmhzaikdfyxb1pq9nlybgkrgi2kjgk40w4wbxzx5mwkbh"; depends=[dplyr htmlwidgets magrittr plyr stringr]; }; d3plus = derive2 { name="d3plus"; version="0.1.0"; sha256="0kadz83pals03n0v3zqhmhf6visigk52yn58xckhb57fid4xzj5w"; depends=[htmlwidgets magrittr]; }; @@ -7131,31 +7410,33 @@ in with self; { dGAselID = derive2 { name="dGAselID"; version="1.2"; sha256="0da7fi872i3ycb3j5v4isr4x2z39a68w4mdq859zslmqhiqd43b6"; depends=[ALL Biobase genefilter MLInterfaces]; }; dHSIC = derive2 { name="dHSIC"; version="2.1"; sha256="1c1xz1f1fp937w4rlylvqv3ii0p9dafvmn4fqq8rzxhcg5rn9j4l"; depends=[Rcpp]; }; dLagM = derive2 { name="dLagM"; version="1.1.4"; sha256="1qc8l6971khz76n9i3wvn6j9mkd9lp35qvnxw1chhprbl1ps4h4w"; depends=[AER dynlm formula_tools lmtest MASS nardl plyr roll sandwich strucchange wavethresh]; }; - dMod = derive2 { name="dMod"; version="1.0.1"; sha256="1xw52kliyiv9vrw0m9y7baqdcpqz4706625if8b63nfr70i77a9p"; depends=[cOde deSolve doParallel dplyr foreach ggplot2 plyr rootSolve stringr]; }; + dMod = derive2 { name="dMod"; version="1.0.2"; sha256="1fnv3f5xlng8f3df5hvxncfnnadzwcsdiklrb2g67llf3m06bq74"; depends=[cOde deSolve doParallel dplyr foreach ggplot2 plyr rootSolve stringr]; }; dPCP = derive2 { name="dPCP"; version="1.0.3"; sha256="1gqd6a1kbzp1433k99l11gvxx11c475f33cpg7138yiiik2lp5s6"; depends=[dbscan e1071 exactci ggplot2 ggpubr raster rlist scales shiny shinyjs stringr]; }; dSVA = derive2 { name="dSVA"; version="1.0"; sha256="0vy0flyg82x0n9vw6jf9f76qy84sp0wnis91faj37ac5hdv3pvsb"; depends=[sva]; }; daarem = derive2 { name="daarem"; version="0.5"; sha256="167sqp7fnyhwgk7crl3b6m6i8mpn3hmsaqzi4v5ggi48fg19bis7"; depends=[]; }; dabestr = derive2 { name="dabestr"; version="0.3.0"; sha256="0i4k8h46cw5ds1cammxxli8kpc82ill81xw3izi33lja7wl9vmnw"; depends=[boot cowplot dplyr effsize ellipsis forcats ggbeeswarm ggforce ggplot2 magrittr plyr RColorBrewer rlang simpleboot stringr tibble tidyr]; }; dabr = derive2 { name="dabr"; version="0.0.2"; sha256="0j6mmr2qvz51g7jjmysqy7sdshnm8y2q4k2zarl6ja6mvi9i65jv"; depends=[knitr RMariaDB]; }; - dad = derive2 { name="dad"; version="3.4.3"; sha256="0gcz1lbrjs6pjjlbxmfpq45drlqkghdqfswl2kcnpiqybl79wzb3"; depends=[DescTools e1071 ggplot2]; }; + dad = derive2 { name="dad"; version="3.4.6"; sha256="0k6w36c4f9icjx1ywdfg8i7hk7yiaq5c979is3146id1bz4fxfxj"; depends=[DescTools e1071 ggplot2]; }; dadjoke = derive2 { name="dadjoke"; version="1.0"; sha256="118pacwc2qb3c5zbhr71zf4zj1ab2g4rs5h6bvrscjyd7a71jc3f"; depends=[]; }; - dae = derive2 { name="dae"; version="3.1-32"; sha256="126w1lb9pz8mb2ajl2vz5dj798nbifp0dypnzfgcwixif5g5bpqi"; depends=[ggplot2 plyr]; }; - daewr = derive2 { name="daewr"; version="1.2-5"; sha256="0cfak3kmw8da7rh04d9qkqypxshj6wanac3318jbc5gvk0injbvd"; depends=[FrF2 lattice stringi]; }; + dadjokeapi = derive2 { name="dadjokeapi"; version="1.0.2"; sha256="143xs3nkf6ynr83z5gggz318nvpnsbfmskl1ipavlzrqk785dlac"; depends=[beepr curl dplyr httr png]; }; + dae = derive2 { name="dae"; version="3.1-37"; sha256="102fgbdpn7yvm1zj180cv4sr1096sz35d4gndsv7w9kriqyi1c1l"; depends=[ggplot2 plyr]; }; + daewr = derive2 { name="daewr"; version="1.2-7"; sha256="138hmmrm3zcdb2rcilvrasndvsq38agp9bpikd3xbb7j4z1nrsl7"; depends=[FrF2 lattice stringi]; }; daff = derive2 { name="daff"; version="0.3.5"; sha256="00zcdf215m7p3xm9yv571v09znhdqacxg69hb5b5j749mp4wdsyj"; depends=[jsonlite V8]; }; dafs = derive2 { name="dafs"; version="1.0-37"; sha256="1vdi57qaqdn39yf1ih2gzry02l289q4bffpksglsl4shs6bg2206"; depends=[s20x]; }; - dagR = derive2 { name="dagR"; version="1.1.3"; sha256="13jyhwjvvrjjja18rqzfdcw9ck90qm5yjwd25nygxgdf1894y03b"; depends=[]; }; - dagitty = derive2 { name="dagitty"; version="0.3-0"; sha256="0b1y81f019lhib2bsbs0rn0i7y0ah8ablsx73rynprrpxrp0fgnk"; depends=[boot jsonlite MASS V8]; }; + dagR = derive2 { name="dagR"; version="1.2.0"; sha256="0fkh2cb0sln8sfklcxjr2qf68wjd4gbqkfay0kynvk5jan58f018"; depends=[]; }; + dagitty = derive2 { name="dagitty"; version="0.3-1"; sha256="1a78g2nr8i7mzzxyb6mfsqqgjyf3s4hwngvyd9vyygzcb79bai3x"; depends=[boot jsonlite MASS V8]; }; dam = derive2 { name="dam"; version="0.0.1"; sha256="1b0fi3l8jxgpr9fwvi03giq7wm39msbh0c82ffgkh54a3bbf5blc"; depends=[]; }; + dampack = derive2 { name="dampack"; version="1.0.0"; sha256="0ig97cd81q4dif7s5sj1khsa21038gy14302a384z1zd3fjsms27"; depends=[dplyr ellipse ggplot2 ggrepel mgcv reshape2 scales stringr triangle truncnorm]; }; damr = derive2 { name="damr"; version="0.3.7"; sha256="12vr630m2az8xb8wndk8cyh7r8mwg3lvr7i3fcgqqxcq9rsgqm4r"; depends=[behavr data_table readr]; }; dams = derive2 { name="dams"; version="0.3.0"; sha256="1jlx1b4cir1vwq75jnmk0pc6j95syfpi0hlnkx82g7pwfxwrdrib"; depends=[crul fauxpas janitor readxl]; }; - dang = derive2 { name="dang"; version="0.0.12"; sha256="0vsj9ii6nnj419bk6vdc0czysb0liq244jnvfb13sk930b5h4j9j"; depends=[tidyCpp]; }; + dang = derive2 { name="dang"; version="0.0.13"; sha256="1gnk6dlflvzspd510laqk90y3p24sk8lqp8cjbhhhfzhk2bjw9z3"; depends=[tidyCpp]; }; dani = derive2 { name="dani"; version="0.1-1"; sha256="0ff0hcb5r8k6m6kv1zhjrpvl7gr1al3q0zlk4yjj89qd2j5byqp8"; depends=[Epi]; }; - dann = derive2 { name="dann"; version="0.2.1"; sha256="1bafd3qkzqgaji6ihhzp95qyzy9gjv75666qp6j6cxw75vp6x9ml"; depends=[fpc ggplot2 MASS purrr Rcpp RcppArmadillo rlang stringr tibble]; }; + dann = derive2 { name="dann"; version="0.2.2"; sha256="115mc2mrmriyp24i8xgr58bjfgz6rzccl7s4akzp8rq5vhca707y"; depends=[fpc ggplot2 MASS purrr Rcpp RcppArmadillo rlang stringr tibble]; }; danstat = derive2 { name="danstat"; version="0.1.0"; sha256="1wb4v4s9qc7qna7jgd1kk0xvyaqmxhnmjvr5wlk5jjl355lhjxbc"; depends=[httr jsonlite readr]; }; dapr = derive2 { name="dapr"; version="0.0.3"; sha256="136chxijyxrl5sbiggxf56zga26zqds647z1z2igwn5mdff1wxyb"; depends=[]; }; daqapo = derive2 { name="daqapo"; version="0.3.1"; sha256="09fmnpp4nl6n1z834dxzs2v56ba9sfb4mrmc1nrrixxhfsxshmb7"; depends=[bupaR dplyr edeaR glue lubridate magrittr miniUI purrr readr rlang shiny stringdist stringr tidyr xesreadR]; }; darksky = derive2 { name="darksky"; version="1.3.0"; sha256="1740cw5qifgvqa0nafd6lmllxi32n1zm45zlify1yn3h1qdcszhb"; depends=[ggplot2 gridExtra gtable httr plyr]; }; - dartR = derive2 { name="dartR"; version="1.8.3"; sha256="0rc4ipwy7xpnf9qih48clm2jva05rfdrjfzkpv25m2p44r1hnh19"; depends=[adegenet ape foreach ggplot2 gridExtra HardyWeinberg hierfstat MASS mmod plyr PopGenReport raster robustbase SNPRelate sp StAMPP stringr tidyr vegan]; }; + dartR = derive2 { name="dartR"; version="1.9.6"; sha256="1lisxip5f2aks008kq8myfsh1kbl74pndq0vbbb8vhgdz1d7c4cs"; depends=[adegenet ape crayon devtools dplyr foreach ggplot2 gridExtra HardyWeinberg hierfstat MASS plyr PopGenReport robustbase SNPRelate sp StAMPP stringr tidyr vegan]; }; darts = derive2 { name="darts"; version="1.0"; sha256="07i5349s335jaags352mdx8chf47ay41q7b0mh2xjwn2h9kzgqib"; depends=[]; }; dash = derive2 { name="dash"; version="0.5.0"; sha256="1hzyxplq0fclyr8ahh0mhrx1ibf49y43889p8fi8kmvg0x24i1iz"; depends=[assertthat base64enc brotli crayon dashCoreComponents dashHtmlComponents dashTable digest fiery htmltools jsonlite mime plotly R6 reqres routr]; }; dashCoreComponents = derive2 { name="dashCoreComponents"; version="1.10.0"; sha256="11jrlls6k6qlvi81741ga908aw22m05fhhr9jpzli982s611jrwl"; depends=[]; }; @@ -7165,8 +7446,9 @@ in with self; { dashboard = derive2 { name="dashboard"; version="0.1.0"; sha256="1znqwvz49r47lp6q48qaas0s63wclgybav82a247qvcavzns3kip"; depends=[Rook]; }; dashboardthemes = derive2 { name="dashboardthemes"; version="1.1.3"; sha256="0z2ar5q0ys5zbny2hfda0sxp29v76sc8xar1ah5hi5jlnas0iccz"; depends=[htmltools]; }; dat = derive2 { name="dat"; version="0.5.0"; sha256="1d3q4bang6pm06rfzh6h947xy3wwqn3l6ri0h4hzklg5pzwpsajd"; depends=[aoos data_table Formula magrittr progress]; }; - data_table = derive2 { name="data.table"; version="1.13.6"; sha256="16ryrpzl86krww5nx7a97i09y5xqld4lw4d9pa1vzjl99x6ds36m"; depends=[]; }; + data_table = derive2 { name="data.table"; version="1.14.0"; sha256="0kgbvap5v2spnkz3dwfm4jh4qcpvbzdn9s8bzfnhzabz9qjdxw8k"; depends=[]; }; data_tree = derive2 { name="data.tree"; version="1.0.0"; sha256="0pizmx2312zsym4m42b97q2184bg3hibvbdrblcga05xln84qrs0"; depends=[R6 stringi]; }; + data_validator = derive2 { name="data.validator"; version="0.1.5"; sha256="1p2dzn9q3vrqs3askp8ccriaxyhay8iyqhnaryr1drycwrd13wi8"; depends=[assertr dplyr htmltools htmlwidgets knitr purrr R6 rlang rmarkdown shiny shiny_semantic tibble tidyr]; }; data360r = derive2 { name="data360r"; version="1.0.8"; sha256="0g3prfaqy7d5fdla4l31cj87vhzi945g22zr7pi2c2whlk4q4n09"; depends=[curl data_table jsonlite reshape2]; }; dataCompareR = derive2 { name="dataCompareR"; version="0.1.3"; sha256="178293hk21qjczi7hyffhlwn0lxrz2k9nxsy7jykjdbsqalyxwli"; depends=[dplyr knitr markdown stringi]; }; dataMaid = derive2 { name="dataMaid"; version="1.4.0"; sha256="133ipl06sc8iicvkbgjxfs0qia76r2p1qhi693vacgfdbd7cmak5"; depends=[ggplot2 gridExtra haven htmltools magrittr pander rmarkdown robustbase stringi whoami]; }; @@ -7174,26 +7456,29 @@ in with self; { dataPreparation = derive2 { name="dataPreparation"; version="1.0.1"; sha256="040k83pknzgq9nn0bhw9p960pdnd8nkcc5hdr4h6193axzp54dh7"; depends=[data_table lubridate Matrix progress stringr]; }; dataQualityR = derive2 { name="dataQualityR"; version="1.0"; sha256="0f2410sd6kldv7zkqsmbz1js0p5iq7zwlnfwmmnlbrd303p35p3j"; depends=[]; }; dataReporter = derive2 { name="dataReporter"; version="1.0.0"; sha256="12rwjd46h35cydvfx5qhb4rssqpm94b628zr06gy9nhwydnajn5x"; depends=[ggplot2 gridExtra haven htmltools magrittr pander rmarkdown robustbase stringi whoami]; }; - dataRetrieval = derive2 { name="dataRetrieval"; version="2.7.6"; sha256="0375gqpj7xhbj7b2445984swcqhp6389w1jy3llvkdwzrf3pfvnc"; depends=[curl httr jsonlite lubridate readr xml2]; }; - datacleanr = derive2 { name="datacleanr"; version="1.0.0"; sha256="0vjzj6s6cj5r1hjnnyzqvb186jmvjxlvfgv9mkvsivapd3xb8bhi"; depends=[clipr dplyr DT formatR fs glue htmltools htmlwidgets lubridate magrittr plotly purrr RColorBrewer rlang rstudioapi shiny shinyFiles shinyWidgets summarytools]; }; + dataRetrieval = derive2 { name="dataRetrieval"; version="2.7.7"; sha256="13p95wcmjb3gy1kkm420299z9smc639mmh8nrxml8dbk6ga03n88"; depends=[curl httr jsonlite lubridate readr xml2]; }; + datacleanr = derive2 { name="datacleanr"; version="1.0.1"; sha256="1kvlnvh2s8csng9q1l5bgc6aw7ax88dfl0iwbi4r8gc76swcbywm"; depends=[clipr dplyr DT formatR fs glue htmltools htmlwidgets lubridate magrittr plotly purrr RColorBrewer rlang rstudioapi shiny shinyFiles shinyWidgets summarytools]; }; datadigest = derive2 { name="datadigest"; version="1.0.2"; sha256="1v4nwflrgjhwkrdlrjnqyq1spv1jkgxn1kmapml0zrvnvwf0r1a1"; depends=[haven Hmisc htmltools htmlwidgets jsonlite miniUI shiny tibble]; }; datadogr = derive2 { name="datadogr"; version="0.1.2"; sha256="10zbxb9gkymw78ras9y4wrifz7cxh3y630yzjcf9ds2p557vcjzp"; depends=[anytime dplyr glue httr lubridate purrr stringr tibble tidyr]; }; dataframeexplorer = derive2 { name="dataframeexplorer"; version="1.0.0"; sha256="1bl24z9hqhrs3k459b5hprwc7j639myvkx0qbfcyv3hmi7mbsd0q"; depends=[data_table dplyr magrittr openxlsx plyr stringr tibble tidyr]; }; dataframes2xls = derive2 { name="dataframes2xls"; version="0.4.7"; sha256="10krlv0l5w021z0qd7rj93pzfjjmcjlda4xz4vq470bxbjmn1bss"; depends=[]; }; datafsm = derive2 { name="datafsm"; version="0.2.3"; sha256="18q6s8sz8bm2xlfvhj0x5sagpn363s3k21s428wd0bqzqlppwbmb"; depends=[caret GA Rcpp]; }; - datagovsgR = derive2 { name="datagovsgR"; version="0.3.2"; sha256="09bjcdalv7957kjzcv5ssjljgz437lk7bllmsbp49bv2riswh1fy"; depends=[curl data_table dplyr httr purrr stringr]; }; + datagovindia = derive2 { name="datagovindia"; version="0.0.3"; sha256="1xc2bkpjaz9bjvxwjwxz398hkxkkykrjnxd3lqly722pf75cqvja"; depends=[curl dplyr httr magrittr plyr rlang stringr]; }; datamap = derive2 { name="datamap"; version="0.1-1"; sha256="0qm4zb9ldg4wz1a7paj5ilr1dhyagq81rk9l2v43hmkv52sssgkv"; depends=[DBI]; }; datamart = derive2 { name="datamart"; version="0.5.2"; sha256="0c0l157fzkcp30ch4ymaalcx18zhz6sa5srr50w9izhbx3pmldxp"; depends=[base64 gsubfn markdown RCurl RJSONIO XML]; }; + datamods = derive2 { name="datamods"; version="1.1.4"; sha256="11zgask87ydqqcfb03ynmdnbp6q3dhdx0f3ma9m2pcd31a325pg1"; depends=[data_table DT htmltools readxl rio rlang shiny shinyWidgets tibble]; }; datanugget = derive2 { name="datanugget"; version="1.0.0"; sha256="1ki4kgz6y9a313f07jml39pdxhadgs287rkpnlwvcw6kgj5qxala"; depends=[doSNOW foreach]; }; dataonderivatives = derive2 { name="dataonderivatives"; version="0.3.1"; sha256="0q1zd1l7l0hmbs1bx469d706rmprjbz2f2dgcnfp9wxfgqpfxkz1"; depends=[assertthat httr lubridate readr tibble]; }; dataone = derive2 { name="dataone"; version="2.2.1"; sha256="1gnzyjiwppx5mjwf38nm146vvmy6vlpqy9ibd2rc5f744pdvifxb"; depends=[base64enc datapack hash httr jsonlite parsedate plyr stringi stringr uuid XML]; }; datapack = derive2 { name="datapack"; version="1.4.0"; sha256="1n69ycca7f7igl9n6spdhn2s431vrljmd0v80q3s5jnyb4mf4xyd"; depends=[digest hash redland uuid XML]; }; - datapackage_r = derive2 { name="datapackage.r"; version="1.3.1"; sha256="0ch4d77pz5xjyl2ypbz0hjgl63259cnk5py79dc3ksalgxhrx9yj"; depends=[config future httr iterators jsonlite jsonvalidate purrr R_utils R6 readr rlist stringr tableschema_r urltools V8]; }; + datapackage_r = derive2 { name="datapackage.r"; version="1.3.3"; sha256="1yvajidkgnvm07r5pm4zj55rlv013h0rzm2yzc1l55s7cswm5akv"; depends=[config future httr iterators jsonlite jsonvalidate purrr R_utils R6 readr rlist stringr tableschema_r urltools V8]; }; datapasta = derive2 { name="datapasta"; version="3.1.0"; sha256="0sqv29iv2rv50rbw1601rn8p7gv7rsw00djhl7h1znr0igzi5b82"; depends=[clipr readr rstudioapi]; }; + dataprep = derive2 { name="dataprep"; version="0.1.1"; sha256="1pg1i5bfsvmx3y3k765nygwk8kka6kpv0nx1gka3zx5f7pq00p6b"; depends=[data_table doParallel dplyr foreach ggplot2 reshape2 scales zoo]; }; + dataquieR = derive2 { name="dataquieR"; version="1.0.5"; sha256="1g3kp61c50zvvcrhdfqrbqr7mg6l8lmdcnydbd9ap9g45niah8kb"; depends=[cowplot dplyr emmeans ggplot2 ggpubr lme4 lubridate MASS MultinomialCI parallelMap R_devices reshape rlang robustbase]; }; dataresqc = derive2 { name="dataresqc"; version="1.1.0"; sha256="1m7c93yk3dp1l5ysgscjvmv7z0xnmgaz4bkci4ljmmmn5a9v6r3c"; depends=[]; }; datarium = derive2 { name="datarium"; version="0.1.0"; sha256="1v98yxsxhfqlalz5qy3x5axb7fy067vf3y0qg7ngixphmy9qybym"; depends=[]; }; datarobot = derive2 { name="datarobot"; version="2.17.1"; sha256="1kfd4xfpwglh05xj67gi14j1c4fwfcrf4kj0w077wk1vzyvz3n37"; depends=[httr jsonlite yaml]; }; - datasailr = derive2 { name="datasailr"; version="0.8.7"; sha256="1qkq7qdsw7rzl6bk8h9l1nhcbi0j57n8hby4wj9p16y7cw4knxvc"; depends=[Rcpp]; }; + datasailr = derive2 { name="datasailr"; version="0.8.8"; sha256="136ccgv5cpa2cpxz256xialh6baxz23if86dfr5b2748aamrg1g7"; depends=[Rcpp]; }; datasauRus = derive2 { name="datasauRus"; version="0.1.4"; sha256="1w1yhwwrmh95bklacz44wjwynxd8cj3z8b9zvsnzmk18m5a4k0fl"; depends=[]; }; dataseries = derive2 { name="dataseries"; version="0.2.0"; sha256="11wc2p5m8qbdmkpbd21lpwl28a1dpab88c3gqyrhsn0298lpnip4"; depends=[]; }; datasets_load = derive2 { name="datasets.load"; version="1.4.0"; sha256="1gs7dvd6r7h3n55b33mdhf0kcvsrddbvl2f3f65k274ygza2j3r7"; depends=[DT miniUI shiny]; }; @@ -7201,59 +7486,63 @@ in with self; { dataspice = derive2 { name="dataspice"; version="1.0.0"; sha256="1r97wsm32rqscjcaq9bbixhpddnx6j2ghi7l4vgx17gcfka29sj6"; depends=[dplyr EML fs ggplot2 jsonlite magrittr purrr readr rhandsontable shiny stringr tibble tidyr whisker]; }; datastepr = derive2 { name="datastepr"; version="0.0.2"; sha256="039yggdj8jdici7hwmkjwgix45lvwjl7rw5h2rfzsm9xaq6vw1z2"; depends=[dplyr lazyeval magrittr R6 tibble]; }; datastructures = derive2 { name="datastructures"; version="0.2.9"; sha256="0prw24iy1af02g1nzw588dv085bdnl6pzvizpxspmwzj6vrfbaav"; depends=[BH purrr Rcpp]; }; - dataverse = derive2 { name="dataverse"; version="0.2.0"; sha256="0lyga8rdsir2yr1n9nr10iiaf6a7dxp1nb04bx8mq8ljrvpkgr8n"; depends=[httr jsonlite xml2]; }; date = derive2 { name="date"; version="1.2-39"; sha256="0mwp1619rxqyyyyxk224fh0x6g4rgyvr97q0kj076cxp71b97cdm"; depends=[]; }; daterangepicker = derive2 { name="daterangepicker"; version="0.1.0"; sha256="1605ch84ad3nmmad0yy3id0izv0nz536lxwib6rkdkjik5761gqk"; depends=[htmltools jsonify shiny]; }; datetime = derive2 { name="datetime"; version="0.1.4"; sha256="0nn1yxknsn3crmwbkws5kvfjhd65dw0fkfbg67gba0dyaqp1jg37"; depends=[]; }; - datetimeutils = derive2 { name="datetimeutils"; version="0.4-0"; sha256="0m98v8jv8n0yyaqxwqwkagwnj4xqx8dygdsmv564jifc355ghc5b"; depends=[]; }; + datetimeutils = derive2 { name="datetimeutils"; version="0.5-0"; sha256="030md2pydhgx8x8chga7byl8x41m2dbw94b4ds7md2nqkdrq7hqz"; depends=[]; }; datoramar = derive2 { name="datoramar"; version="0.1.0"; sha256="0zq6vhq6dmsyagmqrmb85z6fy9qhwra3s3iasr3jgc4ryr009pml"; depends=[httr jsonlite tibble]; }; datos = derive2 { name="datos"; version="0.3.0"; sha256="0q0qjk9iahxzz4gycmiq4nb34kiqxb9bxbh55slp31bvx32zcz6n"; depends=[babynames dplyr forcats fueleconomy gapminder ggplot2 Lahman nasaweather nycflights13 rlang tibble tidyr yaml]; }; + datplot = derive2 { name="datplot"; version="1.0.0"; sha256="1y9pls1g2flz8n3jbh4jcp1fn78qwfbgsrzyf3jms9f6w8fs0f1d"; depends=[]; }; datr = derive2 { name="datr"; version="0.1.0"; sha256="0sqwhn6zdaq8i45ry207mpbda1djjaxp9mcn13hi5wkry6z0bmlr"; depends=[devtools]; }; datrProfile = derive2 { name="datrProfile"; version="0.1.0"; sha256="1bhyk3xjgwf92i765z3bkdnzkxg8fshriz9r6m371q1c75xysfil"; depends=[dplyr odbc RSQLite]; }; dave = derive2 { name="dave"; version="2.0"; sha256="1rraphpp34czyjj15xzvj1ihlnqzcppqls9n2g85n49zv0n1ngn8"; depends=[cluster labdsv nnet tree vegan]; }; - dawai = derive2 { name="dawai"; version="1.2.3"; sha256="18dg81d1018f8ibm4p43ih6fjgm6r0qs5phqbp7pqrixjj3ydk58"; depends=[boot ibdreg mvtnorm]; }; + dawai = derive2 { name="dawai"; version="1.2.5"; sha256="0g52bm66jnvga4sf5n5m18k5jx56vqpn886jk0k6lydj78nkq88q"; depends=[boot ibdreg mvtnorm]; }; + daySupply = derive2 { name="daySupply"; version="0.1.0"; sha256="1317g60cmqlw1wy7n7x5ifh544lzsysif6192s2k16jmgzj6cz2s"; depends=[dplyr lme4 magrittr rlang]; }; daymetr = derive2 { name="daymetr"; version="1.4"; sha256="1xrkdjarkkikjbsxcjvhfba1dzrxh2nq7c04rvl0rkxh513sfqn1"; depends=[httr raster sp tibble tidyr]; }; dbEmpLikeGOF = derive2 { name="dbEmpLikeGOF"; version="1.2.4"; sha256="0vhpcxy702cp3lvlif2fzmvccys8iy7bv1fbg6ki2l8bvn2f7c5p"; depends=[]; }; dbEmpLikeNorm = derive2 { name="dbEmpLikeNorm"; version="1.0.0"; sha256="0h5r2mqgallxf9hin64771qqn9ilgk1kpsjsdj2dqfl3m8zg967l"; depends=[dbEmpLikeGOF]; }; - dbarts = derive2 { name="dbarts"; version="0.9-18"; sha256="1i2azfd7nwsvwrf0wax8dzcdiss0ya662ikjfsb6bh943afzk6gx"; depends=[]; }; + dbWebForms = derive2 { name="dbWebForms"; version="0.1.0"; sha256="0diz5mh4fhwrwqa7jr70vzj2jks7h2n91v2hr1mvvlbc7rzd9yki"; depends=[data_table DBI html5 stringi]; }; + dbarts = derive2 { name="dbarts"; version="0.9-19"; sha256="0k9hrighp6d0s6y97f1956zmgyj9i2k0akk2rpmxid4a4cnyszkc"; depends=[]; }; + dbd = derive2 { name="dbd"; version="0.0-8"; sha256="087cn3fi2kzxfl9b29m95qyjndzyz2ll8j0a80sjpbfzcd0hmma8"; depends=[]; }; dbflobr = derive2 { name="dbflobr"; version="0.1.0"; sha256="0sh14lf6qnj3z4lwkw27vv1s57jf5lfmw9lmz0hvd6nbfgmcr9rg"; depends=[chk clisymbols crayon DBI flobr glue rlang RSQLite]; }; + dbhydroR = derive2 { name="dbhydroR"; version="0.2-8"; sha256="1gd3n6i47qbxp6d3y5sjvgmxc5p3afy2lhkg9020ws1xm0bk9q7d"; depends=[httr reshape2 XML]; }; dblcens = derive2 { name="dblcens"; version="1.1.7"; sha256="02639vyaqg7jpxih8cljc8snijb78bb084f4j3ns6byd09xbdwcw"; depends=[]; }; dblr = derive2 { name="dblr"; version="0.1.0"; sha256="0wzmhmp706mw0pkh81nsb7qzclwyhm6f2mjvpvz043ng5xrxwvvw"; depends=[CatEncoders data_table Metrics xgboost]; }; - dbmss = derive2 { name="dbmss"; version="2.7-3"; sha256="1cby9gx502j4bpvbwa7fan4cypxhj9wbwm7asvrmnh85yr7jsdzr"; depends=[cubature ggplot2 Rcpp RcppParallel reshape2 spatstat spatstat_utils tibble]; }; + dbmss = derive2 { name="dbmss"; version="2.7-5"; sha256="0z9v6sxckk95kcybj2lly6sl2qjb8sz5y2iykckqhji55haxpvlz"; depends=[cubature ggplot2 Rcpp RcppParallel reshape2 spatstat_core spatstat_geom spatstat_utils tibble]; }; dbnR = derive2 { name="dbnR"; version="0.5.3"; sha256="0ypdzd1idkzwm9yawx576mcf5b2rq7m0q71zmmkjygks8g7a0jz6"; depends=[bnlearn data_table magrittr R6 Rcpp]; }; dbnlearn = derive2 { name="dbnlearn"; version="0.1.0"; sha256="0kmyiad7v96mnfi24d2pn3dqmk3g82sx348m1vhhqwijfnj53brb"; depends=[bnlearn bnviewer ggplot2]; }; dbparser = derive2 { name="dbparser"; version="1.2.0"; sha256="06yk6i80xlvrjgi8lpzz82rhhmkbj980vpmpil57acjkfvaznwj6"; depends=[DBI dplyr odbc progress purrr readr RMariaDB RSQLite tibble XML]; }; dbplot = derive2 { name="dbplot"; version="0.3.3"; sha256="1svizj9hcd417yii8ll9s3mnvdqpa5awy9xl71kbwpfcnpdzqf1r"; depends=[dplyr ggplot2 magrittr purrr rlang]; }; - dbplyr = derive2 { name="dbplyr"; version="2.0.0"; sha256="0sa0ggirvfn8j9y4cvhj04z93h6979jm4knjzahdvyzyxhv1kmzc"; depends=[assertthat blob DBI dplyr glue lifecycle magrittr purrr R6 rlang tibble tidyselect withr]; }; - dbscan = derive2 { name="dbscan"; version="1.1-5"; sha256="1vh29nmmana2755zcy15i1mhj3amwc2r84cq9d71wqr7ygzynphk"; depends=[Rcpp]; }; + dbplyr = derive2 { name="dbplyr"; version="2.1.1"; sha256="025wqpmxdhzblb0pf58m3qh5h6bf5x8qvkf47vyl1cjsp13wz95b"; depends=[assertthat blob DBI dplyr ellipsis glue lifecycle magrittr purrr R6 rlang tibble tidyselect vctrs withr]; }; + dbscan = derive2 { name="dbscan"; version="1.1-8"; sha256="18mgax837daipjx9w7f6iy824ph47sd16bkc4gp8k35knnawxxnz"; depends=[Rcpp]; }; dbstats = derive2 { name="dbstats"; version="1.0.5"; sha256="0pr80mx8y87l96hhg0rp3ajxl7yx2f8qr0y1zrjkbzxavjmp9k34"; depends=[cluster pls]; }; - dbx = derive2 { name="dbx"; version="0.2.7"; sha256="1qv28fkvpvjhpsar33r2h2yzybsqwwzs91bimg17lww2058zv1p6"; depends=[DBI]; }; + dbx = derive2 { name="dbx"; version="0.2.8"; sha256="0pdf0l9h44666bmfsa43nrmi77ffzygb5mzjfrv7pk99qi7ryw46"; depends=[DBI]; }; dc3net = derive2 { name="dc3net"; version="1.2.0"; sha256="19ibsvbnq6y88vqvgkm31zrqwjhpml59d792bz0zkk50r1q5bnyr"; depends=[c3net igraph RedeR]; }; dcGOR = derive2 { name="dcGOR"; version="1.0.6"; sha256="0rvwa25r23yayx1i6xhkfaw2z85d2iyfx3slg3aq1m0fa7kj380p"; depends=[dnet igraph Matrix]; }; + dccmidas = derive2 { name="dccmidas"; version="0.1.0"; sha256="0ng46i9rv4aw26af03ryhmcrb8xhhd8d72zbqiwrzhhkh18azbgx"; depends=[lubridate maxLik Rcpp RcppArmadillo Rdpack roll rugarch rumidas tseries xts zoo]; }; dccvalidator = derive2 { name="dccvalidator"; version="0.3.0"; sha256="1l74pqvac0n7dyfzkz2m0m6j19c8icymbwcifp2g5qvrpznfhxjb"; depends=[config ggplot2 glue golem htmltools knitr markdown purrr reactable readr readxl reticulate rlang shiny shinyBS shinydashboard shinyjs skimr tibble visdat]; }; dclone = derive2 { name="dclone"; version="2.3-0"; sha256="0w1bhzsnmnhsrrw5ffm89pj2wy2fmx14y7g6b1mb2wlwbczjzzsh"; depends=[coda Matrix rjags rstan]; }; dclust = derive2 { name="dclust"; version="0.1.0"; sha256="1icfx52v3g7kkkc11pw0xlrc8dlx5q3n2zbrd3fccmw17jzxqbg7"; depends=[openssl phylogram]; }; dcminfo = derive2 { name="dcminfo"; version="0.1.7"; sha256="03r0ynzc5cck2rz20zbg5zx8v6s66ivizqav1pjkyvp6kxkmnf8q"; depends=[CDM]; }; dcmle = derive2 { name="dcmle"; version="0.3-1"; sha256="1d6zk9413h30wcw8q1gnjzk67vshmjcpnh8zjxrsh1h69i1z6rpy"; depends=[coda dclone lattice]; }; - dcmodify = derive2 { name="dcmodify"; version="0.1.2"; sha256="093rh3r3n0wjdpx861xiqd1zqd5v1v9rzxgcynz4awr7jbm5xszi"; depends=[settings validate yaml]; }; + dcmodify = derive2 { name="dcmodify"; version="0.1.5"; sha256="1v8zv979iqlzfb75h542fkhy149kx1jqsv8rp13han9gd2kalp60"; depends=[settings validate yaml]; }; dcov = derive2 { name="dcov"; version="0.1.1"; sha256="0c3a5dzpizsxlsh723pcd0d7n0mgfc9y35vrfhmskp3c1x639mh3"; depends=[Rcpp RcppArmadillo]; }; dcurver = derive2 { name="dcurver"; version="0.9.2"; sha256="1v4h480lff1cyjjwb80dksiffh0y4b3s07lq2l2r21rn1l4mav6c"; depends=[Rcpp RcppArmadillo]; }; dcv = derive2 { name="dcv"; version="0.1.1"; sha256="12c716x8dnxnqksibpmyysqp2axggvy9dpd55s9bhnsvqvi6dshj"; depends=[lmtest]; }; ddalpha = derive2 { name="ddalpha"; version="1.3.11"; sha256="1sdnb47r534nh138zk3a6b2mgi74nvshc7p5m304vjs9jlx4l2y3"; depends=[BH class geometry MASS Rcpp robustbase sfsmisc]; }; dde = derive2 { name="dde"; version="1.0.1"; sha256="0qgnxb27a2wnrbfk5v22i985mqhjp4hp05vl1ccsapbxkpf0gqcv"; depends=[ring]; }; ddi = derive2 { name="ddi"; version="0.1.0"; sha256="0pnkylz7l6brx6i73wys637w811psxhnr39lcmkag41s6jcgabd5"; depends=[]; }; - ddiv = derive2 { name="ddiv"; version="0.1.0"; sha256="1r2sxlkw1vxf2svdi1nary3hb7c5k1b4j820mj268r9swmy632ch"; depends=[MASS segmented]; }; + ddiv = derive2 { name="ddiv"; version="0.1.1"; sha256="0xsn74z78znrm3rnnvdphp89sb0lik564ha3wv6n3ldrfh1van8y"; depends=[MASS qpdf segmented]; }; ddp = derive2 { name="ddp"; version="0.0.2"; sha256="0fh1ml5gsk26p2i9cnv0hn5kbix0rrl3xb60y6vnpxzsr2n6xw25"; depends=[]; }; ddpca = derive2 { name="ddpca"; version="1.1"; sha256="1qsanid7sr2nc9pwzyz4cbjc1vg0rj255d3rnh1rb22agrgj2bc1"; depends=[MASS Matrix quantreg RSpectra]; }; ddpcr = derive2 { name="ddpcr"; version="1.15"; sha256="04q2k6kag3qx9g6iarb84ski7s895xdd20zlaw7wmidfv038kmws"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs tibble]; }; - ddsPLS = derive2 { name="ddsPLS"; version="1.1.4"; sha256="0h0iiycprham72k3yq81d15gnliln0i2r71lxhsqrcbrly9hpanr"; depends=[corrplot doParallel foreach MASS RColorBrewer Rcpp Rdpack]; }; ddst = derive2 { name="ddst"; version="1.4"; sha256="1y0immm337adkd2bjx8c5pf02w9wysv3gj26f4qf0jiba0f2wk8n"; depends=[evd orthopolynom]; }; deBInfer = derive2 { name="deBInfer"; version="0.4.2"; sha256="108vijk71sgsj14hwfv78r4lnn68cybvnpr92zvrvl0d82b7qxfd"; depends=[coda deSolve MASS mvtnorm PBSddesolve plyr RColorBrewer truncdist]; }; deGradInfer = derive2 { name="deGradInfer"; version="1.0.1"; sha256="0yczn63fhpirvz1g1kq9q0m04sisflxxgxy70c87jyvrw12nfwss"; depends=[deSolve gdata gptk]; }; deSolve = derive2 { name="deSolve"; version="1.28"; sha256="0jasvdzig0pzhzspmy20089az19r91xjfb9q6h8gj7c4mr6fymac"; depends=[]; }; deTS = derive2 { name="deTS"; version="1.0"; sha256="08yq7vfcd8fv8qw2w0f1rnj3rzys9kslmkqspmiz6prmzqvj1zf1"; depends=[pheatmap RColorBrewer]; }; deTestSet = derive2 { name="deTestSet"; version="1.1.7.2"; sha256="0ra7686zkyaj61fd6s2mm6blzpqhplw9icwzfczk9aagg8nc4s72"; depends=[deSolve]; }; - deaR = derive2 { name="deaR"; version="1.2.2"; sha256="0bagm10ia525vyghf55kygb237ldbql9cwsywxl5nj910w8w64fm"; depends=[dplyr ggplot2 gridExtra igraph lpSolve plotly tidyr writexl]; }; + deaR = derive2 { name="deaR"; version="1.2.3"; sha256="1lhs649kr7zm4m6qqlkk2qz0wn98vx674lri7b9p2r846zzwq9y9"; depends=[dplyr ggplot2 gridExtra igraph lpSolve plotly tidyr writexl]; }; deadband = derive2 { name="deadband"; version="0.1.0"; sha256="02pq3d0l0wy8bdlyfir3zf46j1ascx4qajyq5cf28yl62q6ngq5d"; depends=[TTR]; }; deal = derive2 { name="deal"; version="1.2-39"; sha256="0sw0v1mm004ky1gjw3dmvf2vb7nf2j9s9386bhqxijw63j7xnjd3"; depends=[]; }; deamer = derive2 { name="deamer"; version="1.0"; sha256="1xbxr78n6s1yhf192ab4syi1naqlwl9z4cxzchrkw80q7bxqfiz8"; depends=[]; }; @@ -7262,7 +7551,7 @@ in with self; { debugr = derive2 { name="debugr"; version="0.0.1"; sha256="0lfq0s0hibd00558vl3dmvrkzxjc7q62xr8sqzai0pv9a9lhixcn"; depends=[rprojroot rstudioapi]; }; decido = derive2 { name="decido"; version="0.3.0"; sha256="14y3z5ys5y3kffgm0dk92rx4vd1mi9jvxn7pqvwi4jhyx7wx06pw"; depends=[Rcpp]; }; decision = derive2 { name="decision"; version="0.1.0"; sha256="13d0yyg5zp7n3r92l0l1dsffxfph6vacrlzga9rz41l5pja72z6g"; depends=[]; }; - decisionSupport = derive2 { name="decisionSupport"; version="1.105.3"; sha256="04bc3w0cyxhsay1padk4c27jjmbymymr9gazgjx5qykgr3qdszj6"; depends=[chillR fANCOVA ggplot2 msm mvtnorm nleqslv rriskDistributions]; }; + decisionSupport = derive2 { name="decisionSupport"; version="1.106"; sha256="1qp18a9gawb6qpkscw54yq6dn2pzv95wqpz4c3wism0npjdj2zv7"; depends=[assertthat chillR dplyr fANCOVA ggplot2 ggstance magrittr msm mvtnorm nleqslv patchwork rriskDistributions stringr tidyr tidyselect]; }; deckgl = derive2 { name="deckgl"; version="0.2.7"; sha256="0ifv6j0kbwayl60bf1rwd1h7424npqsqsvb44ngg7v0ik4bgbyfx"; depends=[base64enc htmltools htmlwidgets jsonlite magrittr readr tibble yaml]; }; decode = derive2 { name="decode"; version="1.2"; sha256="1qp0765gl3pgfdzjwj7icf3zminxxmrlw6gx3vj51y6c2y5ws4as"; depends=[]; }; decoder = derive2 { name="decoder"; version="1.2.2"; sha256="1jxgd32bn36ldal26wivhdxgjy247l7r4ickacr1p8rrwxvhpk18"; depends=[]; }; @@ -7272,15 +7561,17 @@ in with self; { deconstructSigs = derive2 { name="deconstructSigs"; version="1.8.0"; sha256="014x0nb23jb98666kaav2phkvmkr38pi38jv0dqd4jv7zp0gdf1a"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb reshape2]; }; deconvolveR = derive2 { name="deconvolveR"; version="1.2-1"; sha256="191bgncgwjhb13i27bf8072a0z3mkpjbbp06ys3nri0ggsv5r108"; depends=[]; }; decor = derive2 { name="decor"; version="1.0.0"; sha256="1vk1szw267mcs9q7saffkrlnlncnw9k70g9lhj81iwkwfx8ir962"; depends=[tibble vctrs]; }; + decorators = derive2 { name="decorators"; version="0.1.0"; sha256="0whcwi68h374pm85gzwaw7kcjhgka1il12g90vrf87lafhbl2x4i"; depends=[purrr]; }; deducorrect = derive2 { name="deducorrect"; version="1.3.7"; sha256="10lvhdnnc6xiy20hy6s5rpqcvilj8x0y6sn92rfjkdbfsl00sslp"; depends=[editrules]; }; - deductive = derive2 { name="deductive"; version="0.1.3"; sha256="19h41a20c27gmky9xrgqkf0n2s8fzn2hiivs5dg71kl9gc4m1jhn"; depends=[lintools stringdist validate]; }; + deductive = derive2 { name="deductive"; version="1.0.0"; sha256="11cn6wncd438g5ar5pjw6rw50060mksjf0xjcds92s97dz5m28a4"; depends=[lintools stringdist validate]; }; deep = derive2 { name="deep"; version="0.1.0"; sha256="1764cnsax8jwp2pb6rnmlb0f5m99jss84yi9rp017hdm20izvzrq"; depends=[]; }; + deepMOU = derive2 { name="deepMOU"; version="0.1.1"; sha256="1r05wg01nighmhs2r8z91w091fz2r1ryb1j0mi96knqqdjgcbh4i"; depends=[dplyr entropy extraDistr ggplot2 MASS Rfast skmeans]; }; deepNN = derive2 { name="deepNN"; version="1.0"; sha256="0jpf25i0f3a0dfqykx8dl8qq7f37l1n28pzp715bxc0izsrrx9bk"; depends=[Matrix]; }; deepboost = derive2 { name="deepboost"; version="0.1.6"; sha256="1nf9gjk9gjl2dz7cr3vh5lg8nxkbqwr82a132nw853axbdgbs9ga"; depends=[Rcpp]; }; - deepdep = derive2 { name="deepdep"; version="0.2.1"; sha256="08v2pxbk1w5ajf3zfnkksbwgc29fj7j2znrrix83nyaxmyz8yajn"; depends=[cranlogs ggforce ggplot2 ggraph graphlayouts httr igraph jsonlite scales]; }; - deepdive = derive2 { name="deepdive"; version="1.0.1"; sha256="1385pxkcdaf3rs2br1dghm7d7zd94mfgmqjns4z09mryv72n7cl0"; depends=[data_table fastDummies plyr rpart stringr treeClust]; }; + deepdive = derive2 { name="deepdive"; version="1.0.2"; sha256="1gp7f4mnyayks7m8vz1nxrclnpmqz12kd7z8lhz8wcf76z01cbpv"; depends=[data_table fastDummies plyr rpart stringr treeClust]; }; deepgmm = derive2 { name="deepgmm"; version="0.1.62"; sha256="1cllbq87xxzgba3a1prkjg7hdfkxjnmi8fgizqrlsvbxdhpg61yh"; depends=[corpcor mclust mvtnorm]; }; deepgp = derive2 { name="deepgp"; version="0.2.0"; sha256="0svbgng854qw8ar18ypd94jx38gjk9j33dqq0wxdjg7flqm8bi7w"; depends=[doParallel foreach]; }; + deeplr = derive2 { name="deeplr"; version="2.0.0"; sha256="189kfcsd3cr0397krbfqh56x7h0v6i27s5jbfwr5zrf3jazllall"; depends=[httr purrr tibble tokenizers utf8]; }; deepnet = derive2 { name="deepnet"; version="0.2"; sha256="09crwiq12wzwvdp3yxhc40vdh7hsnm4smqamnk4i6hli11ca90h4"; depends=[]; }; deepredeff = derive2 { name="deepredeff"; version="0.1.0"; sha256="0bfjkq46nds4xhbqvjd1ng36s3x41hv90w6lvdh04m7kbx5yx9sz"; depends=[Biostrings dplyr ggplot2 ggthemes keras magrittr purrr reticulate rlang seqinr tensorflow]; }; default = derive2 { name="default"; version="1.0.0"; sha256="0hzxgp9la9kll5cw3m4gd02rii571xsn1v53kz407k7k6rfg5mda"; depends=[]; }; @@ -7289,24 +7580,26 @@ in with self; { deformula = derive2 { name="deformula"; version="0.1.1"; sha256="0h85yzl8kvjwrn1mkzyblvknf7gg8kx8y85qnvkwfbr9ik42ngn1"; depends=[]; }; degreenet = derive2 { name="degreenet"; version="1.3-3"; sha256="07mkj2sdp09624mmb1x3djjypnrzn43qn2j4m93blli51j6zchm3"; depends=[igraph network]; }; deisotoper = derive2 { name="deisotoper"; version="0.0.7"; sha256="0lpmx3qy44xjlil4nsbvcbczxq22vr8xn6v9a5bdx7cd31qwm2l3"; depends=[rJava]; }; + dejaVu = derive2 { name="dejaVu"; version="0.3.0"; sha256="0l30m707zrp05d7hywlx443n02mflxqsampmcblj3fvcbyywc1fd"; depends=[MASS]; }; delayed = derive2 { name="delayed"; version="0.3.0"; sha256="04f4k683jzb763sb9knb81lw8df56y1378g4i3c1x8m83bvj1mhs"; depends=[assertthat BBmisc data_table future igraph progress R6 rlang rstackdeque uuid visNetwork]; }; - deldir = derive2 { name="deldir"; version="0.2-3"; sha256="0kin1hsd6dj36kkg7n328mzp21wwn9jm69lvgg2rvbf6bq7q091d"; depends=[]; }; + deldir = derive2 { name="deldir"; version="0.2-10"; sha256="08ij6zb6id71zk6gzs9z779y49y41c2gpi7p7mljnlw7py92g8k5"; depends=[]; }; delt = derive2 { name="delt"; version="0.8.2"; sha256="06g03wy9r2qvly0lnv5fv4k366mhlk56qkvak0xaxy99p1i34kmv"; depends=[denpro]; }; deltaPlotR = derive2 { name="deltaPlotR"; version="1.6"; sha256="15vjg3viyfrxvvh34p8i7j8p0vpg5628g8198adhi0i2ri3ygz9a"; depends=[MASS]; }; deltar = derive2 { name="deltar"; version="1.0.0"; sha256="1ki89ysz4qlq5z094ybg3aqfcb6g633ccvpj1cg6nri9z5qjwpm1"; depends=[Bchron]; }; + dematel = derive2 { name="dematel"; version="0.1.0"; sha256="1m84sd46cg7188wnjx09g88xvxdp7i0mdxnynwlqkgcmnwx4bdjw"; depends=[ggplot2 knitr]; }; deming = derive2 { name="deming"; version="1.4"; sha256="1yx3qrbik6jpqgsi0gqgc7y2cra13qlisg2gq8rvnv57nvcvb421"; depends=[boot]; }; demoGraphic = derive2 { name="demoGraphic"; version="0.1.0"; sha256="0b2fqa0z875wwd7qdqh2qfvkzh2cpbmck4smf9c0p31wv5yin0sq"; depends=[magrittr MASS officer]; }; - demoKde = derive2 { name="demoKde"; version="0.9-4"; sha256="0p4v808m42wbv8ibdfqzm43cbbg0yl452wnm1mzqq2n37z6yljkr"; depends=[]; }; + demoKde = derive2 { name="demoKde"; version="1.0.0"; sha256="11im065srsjcy6df39b3gd2p6av2i8q716j3wl1dg8l9sh8z4yi0"; depends=[]; }; demoShiny = derive2 { name="demoShiny"; version="0.1"; sha256="15zfm8dxsjwqj1xlwz7r61cvnsajw4n6viqkakxrgsfpv1x62qaf"; depends=[shiny]; }; demogR = derive2 { name="demogR"; version="0.6.0"; sha256="06x82ffbdv6ifl8xh52d3npdwha67v1ylfjp78j5pa4wdqkg221b"; depends=[]; }; demography = derive2 { name="demography"; version="1.22"; sha256="1m15capbfknr4rqxmfgj1vb7rmgambk6r9ic37149525sg7wn3j6"; depends=[cobs forecast ftsa mgcv rainbow RCurl strucchange]; }; demu = derive2 { name="demu"; version="0.3.0"; sha256="1mp5iz8mg0d6cyqi3f6fdhk6x5xxvng5bi13b7jnlp60wpjrq0il"; depends=[ClusterR fields Matrix Rcpp RcppArmadillo spam]; }; dendRoAnalyst = derive2 { name="dendRoAnalyst"; version="0.1.1"; sha256="0pdhd89kn9ndc9xdqwpjb1h49zwgya8whjfhpjvlc7cwb3112xj1"; depends=[boot pspline zoo]; }; dendextend = derive2 { name="dendextend"; version="1.14.0"; sha256="0n3qg76apgbqbvxv2yp5qwpy6nx03xmmc9mdfyq4dqblqhdld29p"; depends=[ggplot2 magrittr viridis]; }; - dendroTools = derive2 { name="dendroTools"; version="1.1.1"; sha256="0wcl5jsyvj12id6khdrlzxb23bhs7bxqdaf0gfry927zdbzjvmpa"; depends=[boot brnn Cubist dplyr ggplot2 gridExtra knitr lubridate magrittr MLmetrics oce plotly psych randomForest reshape2 scales viridis]; }; + dendroTools = derive2 { name="dendroTools"; version="1.1.3"; sha256="1crkzp75lpf0lagr2vl8sgzck80nrcm40mrmq0h4a2k7yha2mqrw"; depends=[boot brnn Cubist dplyr ggplot2 gridExtra knitr lubridate magrittr MLmetrics oce plotly psych randomForest reshape2 scales viridis]; }; dendroextras = derive2 { name="dendroextras"; version="0.2.3"; sha256="0hb7crbgsnbcwvbk05iz5ik45n7zgysmwjj6xc46131yd8l0i1qx"; depends=[]; }; dendrometeR = derive2 { name="dendrometeR"; version="1.0.0"; sha256="1par27ipgbfbrmdlwvkf82i5dgnfrcawmavakrf8lplin2hhb7gs"; depends=[forecast pspline zoo]; }; - dendsort = derive2 { name="dendsort"; version="0.3.3"; sha256="1m4qh79ppfvipmbi8m8vwq0hqmwwipbg5izihz5j6x8a4g5i6iym"; depends=[]; }; + dendsort = derive2 { name="dendsort"; version="0.3.4"; sha256="0rs7y471wrhkgibxdmfh5xhp3pa004rrlm2w08b6qli5gq4im5d2"; depends=[]; }; denoiSeq = derive2 { name="denoiSeq"; version="0.1.1"; sha256="18w69gxbnazg5k8bzi76slcqxnbfmrndp548zazz8bpxz3jns699"; depends=[]; }; denoiseR = derive2 { name="denoiseR"; version="1.0.2"; sha256="1q5kxiwfkrf2k0gpidzhl4hyzyjcm33rwlw4dan9nkx1181naw9l"; depends=[FactoMineR irlba Matrix]; }; denovolyzeR = derive2 { name="denovolyzeR"; version="0.2.0"; sha256="03ya5clzqp12lfhw073ri0pwgxn53a6pvnais317a8bv1yinxspb"; depends=[dplyr reshape2]; }; @@ -7320,7 +7613,7 @@ in with self; { denvax = derive2 { name="denvax"; version="0.1.2"; sha256="0a8x7z7jagshc5h6xy24xrvqv0gm08f78ik6y8ki4i0mhl8c5fyx"; depends=[]; }; depcoeff = derive2 { name="depcoeff"; version="0.0.1"; sha256="08vs0yzfvd4ahcs5rz4i4spp8l6fg45bm0m22gn5rzxc4759mzac"; depends=[copula Rcpp]; }; depend_truncation = derive2 { name="depend.truncation"; version="3.0"; sha256="1jym52qxx8v4kbq2578d03q2593q96jccr85if47djikw0aaxmcr"; depends=[mvtnorm]; }; - depigner = derive2 { name="depigner"; version="0.8.3"; sha256="1bx4z5xfh0hrx38dj10gl6jq2rv2rabc18xm2sj98bv7b16fzvpq"; depends=[desc dplyr fs ggplot2 Hmisc magrittr progress purrr rlang rprojroot stringr telegram_bot tibble tidyr usethis]; }; + depigner = derive2 { name="depigner"; version="0.8.4"; sha256="0n4skz3ngz41g0lydcw1jpqlzw0pdfks2rj63pa78qhcr84s6n57"; depends=[desc dplyr fs ggplot2 Hmisc magrittr progress purrr rlang rms rprojroot stringr telegram_bot tibble tidyr usethis]; }; depmix = derive2 { name="depmix"; version="0.9.16"; sha256="1vi9fi131ni34z9p3x6pdp6y9v0y0nx71zg1q8898frhqwbwhd9c"; depends=[MASS]; }; depmixS4 = derive2 { name="depmixS4"; version="1.4-2"; sha256="07d4fxwnbl3jqczrylbvdch9q87az37jrjsmvilhl9h98z31wzaq"; depends=[MASS nlme nnet Rsolnp]; }; depth = derive2 { name="depth"; version="2.1-1.1"; sha256="0szy0027nh4ps1z919i740i50app5q7cfyg1fj7pdyl45nbl8k6m"; depends=[abind circular rgl]; }; @@ -7328,65 +7621,64 @@ in with self; { depthTools = derive2 { name="depthTools"; version="0.5"; sha256="0980w80vc25dwrkrsfyx84g8dxz94hwzx0j7x4y2jx4k3nflbmqv"; depends=[]; }; dequer = derive2 { name="dequer"; version="2.0-1"; sha256="04kzlff8xa733qkkx0gacgig7d4l7yvgqmzva0mj8di12byh214p"; depends=[]; }; derivmkts = derive2 { name="derivmkts"; version="0.2.4"; sha256="1ncqhi6f69jv75dad1l9wsrfxi5m2wizywikkbg7i9qmh42xkh8w"; depends=[mnormt]; }; - desc = derive2 { name="desc"; version="1.2.0"; sha256="1s6s13fk6sxwcj8wzkwxl9vr33153xx11p5wi9avqx3rzkabavz6"; depends=[assertthat crayon R6 rprojroot]; }; + desc = derive2 { name="desc"; version="1.3.0"; sha256="1sw4vya3l971gpccq4gnjywgbl73bgx8la18l0wy617qv94f905y"; depends=[crayon R6 rprojroot]; }; descomponer = derive2 { name="descomponer"; version="1.5"; sha256="1dxnvignd3hwagkghvdiqfrkxlhyvxndprcyh8n9pmq8zgask5qk"; depends=[]; }; - descr = derive2 { name="descr"; version="1.1.4"; sha256="05maviw8l8qhmy7p80gs3dlyy6pqk5k1686ny4xla4psj8mr7lbk"; depends=[xtable]; }; + descr = derive2 { name="descr"; version="1.1.5"; sha256="00l3h71y4yfys60sqhifxyxvnjbkxxfxdb4zqjyy0v91pf3z2zv9"; depends=[xtable]; }; describedata = derive2 { name="describedata"; version="0.1.0"; sha256="10ryy886jr2gwi6h90girl82ivwrmhz1vcwi4f6khmmpwsy95hav"; depends=[broom dplyr forcats ggplot2 haven lmtest purrr rlang stringr tibble tidyr]; }; describer = derive2 { name="describer"; version="0.2.0"; sha256="1pjyihmn4gkaamixsc3qwynsc02pwv9bgn6s7z7acmmsybhhs6xn"; depends=[]; }; descriptr = derive2 { name="descriptr"; version="0.5.2"; sha256="1shqcykp8ahgarsam56zv4gcbj0mmfm7jy1i9fgbmy5ddksnific"; depends=[dplyr ggplot2 magrittr rlang scales tibble tidyr]; }; - descstat = derive2 { name="descstat"; version="0.1-0"; sha256="0whggzbh8wwbhvv26hzkc7kdh609b7ziln3px4rdxwbzdrdf70nz"; depends=[dplyr purrr rlang tidyr]; }; + descstat = derive2 { name="descstat"; version="0.1-2"; sha256="0q463p0bq80c9lhwfv4imbhgx6f1w2jqm3022p5zvycfa9w39rin"; depends=[cli dplyr forcats magrittr purrr rlang tibble tidyr tidyselect]; }; descstatsr = derive2 { name="descstatsr"; version="0.1.0"; sha256="1pz5lww1dkkqvsq6h0vkch39bj76qffmmag3zlag5in75s4wj0wl"; depends=[moments zoo]; }; desctable = derive2 { name="desctable"; version="0.1.9"; sha256="0ixakd5rs9csq7rm6h8id44qkdg2gn0cg6hwdcwvbvshflbg4jxx"; depends=[dplyr DT htmltools pander]; }; deseasonalize = derive2 { name="deseasonalize"; version="1.35"; sha256="1fjsa7g34dckjs6mx9b10m99byxagggm0p9pw2f1vmpjqlasin0l"; depends=[FitAR lattice]; }; - desiR = derive2 { name="desiR"; version="1.2.1"; sha256="0ghcv96bbwn74mka4dpf2lkpnlikjn3q6lx2sl8bbw77nriap0n6"; depends=[]; }; + desiR = derive2 { name="desiR"; version="1.2.2"; sha256="149wgg5mbq95wizpc24mwb8qfxjdia4qkz66bnzjgiiyfh6r46wp"; depends=[]; }; designGG = derive2 { name="designGG"; version="1.1"; sha256="1x043j36llwd7kd4skbpl2smz2ybsxjqf5yd1xwqmardq60gdv2w"; depends=[]; }; designmatch = derive2 { name="designmatch"; version="0.3.1"; sha256="0px6iyqik4sfs25yybamvf3ay0vd6r75acj8hin76jl6l7fwk30f"; depends=[lattice MASS Rglpk slam]; }; - designr = derive2 { name="designr"; version="0.1.10"; sha256="1x7aixhz5cgjh44m2w2zgz5gmilbs2vj78hyg1sqjb483g36x224"; depends=[crossdes dplyr MASS tibble]; }; + designr = derive2 { name="designr"; version="0.1.12"; sha256="1sn5cnqpczzvxmcib4mcwys8y98vx3pxdxcpy2v6rvrhjsqrc207"; depends=[crossdes dplyr lme4 MASS tibble]; }; desirability = derive2 { name="desirability"; version="2.1"; sha256="094gxvp6a60lfcc0a0gk9rv1p6ajnzq9m58sy8cvhcj5337g4fmk"; depends=[]; }; desire = derive2 { name="desire"; version="1.0.7"; sha256="0jmj644nj6ck0gsk7c30af9wbg3asf0pqv1fny98irndqv508kf6"; depends=[loglognorm]; }; desplot = derive2 { name="desplot"; version="1.8"; sha256="0i3vwg0v3snan6rvgc2v3i01fdi3xbw3k407zrxdai27i0mjanx8"; depends=[ggplot2 lattice reshape2]; }; details = derive2 { name="details"; version="0.2.1"; sha256="03fw3jbf1a34w9c205wwjkqnw6ic1gylsf36qw33mx4ba252s2hy"; depends=[clipr desc httr knitr magrittr png withr xml2]; }; detect = derive2 { name="detect"; version="0.4-4"; sha256="1gzd98b4kg5rw0kpgznrb1wmr3iavdq5983n6wqx33lga1lqq9d6"; depends=[Formula Matrix pbapply]; }; + detectR = derive2 { name="detectR"; version="0.1.0"; sha256="1l93b8xx6xridwcvs15xgfm7w05p3r233rxpakpii3d71rnbs8cy"; depends=[doParallel foreach glasso lavaan LogConcDEAD signal]; }; detectRUNS = derive2 { name="detectRUNS"; version="0.9.6"; sha256="0yl1x0jz66hingbl094picsiyrxzxvnz0grq63rva6nwn7pv1c0b"; depends=[data_table ggplot2 gridExtra iterators itertools plyr Rcpp reshape2]; }; detector = derive2 { name="detector"; version="0.1.0"; sha256="010i063b94hzx7qac8gpl67gmk7hzgqm9i1c7pbbw4la3wcd9lz7"; depends=[stringr]; }; - detectseparation = derive2 { name="detectseparation"; version="0.1"; sha256="0y0d1irw3pzvyvc7smii0ikx7dv376s2cdixjcs5c3jsw0iqxyim"; depends=[lpSolveAPI pkgload ROI ROI_plugin_lpsolve]; }; + detectseparation = derive2 { name="detectseparation"; version="0.2"; sha256="17fpspfsn1rbns8783a0iv5zix95lxza0vfcc7g9v36yarxly609"; depends=[lpSolveAPI pkgload ROI ROI_plugin_lpsolve]; }; detpack = derive2 { name="detpack"; version="1.1.3"; sha256="1mk2k9akagz7knd4n5p8nxkmnm2mdv9izk4i5yl2v9nv5v39mc4h"; depends=[]; }; detrendeR = derive2 { name="detrendeR"; version="1.0.4"; sha256="1z10gf6mgqybb9ml6z3drq65n7g28h2pqpilc2h84l6y76sy909c"; depends=[dplR]; }; - detrendr = derive2 { name="detrendr"; version="0.6.9"; sha256="0wajxgcw348pd78apa3fx2b8qvc9lzga5ld975b1h0dxb9iqkc1a"; depends=[arrayhelpers autothresholdr checkmate doParallel dplyr filesstrings foreach ijtiff iterators magrittr plyr purrr Rcpp RcppParallel rlang stringr withr]; }; + detrendr = derive2 { name="detrendr"; version="0.6.13"; sha256="1viri9f6hiivddv3rd7whq8l0my932f9074qj117wqmwvxb8zc57"; depends=[arrayhelpers autothresholdr checkmate doParallel dplyr filesstrings foreach ijtiff iterators magrittr plyr purrr Rcpp RcppParallel rlang stringr withr]; }; detzrcr = derive2 { name="detzrcr"; version="0.3.1"; sha256="0afi1ir8il5xmzkpmbc2m5mvmgzlqw8qdn04gbnwl74a03yaxxmj"; depends=[DT ggplot2 MASS shiny]; }; devEMF = derive2 { name="devEMF"; version="4.0-2"; sha256="1wpziix6g1lr7qq728dfxvd0dyynnliilk029pl861mzx2dgdr6l"; depends=[]; }; devFunc = derive2 { name="devFunc"; version="0.1"; sha256="0f2s5gssk9napmah7zcss1rnh7pzlq90gzwcnvyr9rrq6k118n8q"; depends=[plyr stringr]; }; devRate = derive2 { name="devRate"; version="0.2.1"; sha256="1wq32igzc0xk0vmddrn1zk8m7zxy0gpvpswlgjjmxflslp3yszjf"; depends=[]; }; devoid = derive2 { name="devoid"; version="0.1.1"; sha256="14cf75wih7401vmrfmswc9cihgmbyn90wg2vjkzv628mm5fgg01h"; depends=[]; }; - devtools = derive2 { name="devtools"; version="2.3.2"; sha256="0vcqs4c5dfjs2ddkclv3z7zzix2zrnrxvzax8hjvjszgp8362275"; depends=[callr cli covr desc DT ellipsis httr jsonlite memoise pkgbuild pkgload rcmdcheck remotes rlang roxygen2 rstudioapi rversions sessioninfo testthat usethis withr]; }; - dexter = derive2 { name="dexter"; version="1.1.1"; sha256="0crm9vwjr5hidagn45ndd478b56622rmqryy4cj5ayh2177d6n64"; depends=[DBI dplyr MASS Rcpp RcppArmadillo rlang RSQLite tidyr]; }; - dexterMST = derive2 { name="dexterMST"; version="0.9.0"; sha256="0lawpqz7jrfshc16fjx6f44z6mqy3b9nl56h1nzm4jkp4kv9lizr"; depends=[crayon DBI dexter dplyr igraph Rcpp RcppArmadillo rlang RSQLite tidyr]; }; + devtools = derive2 { name="devtools"; version="2.4.0"; sha256="094kl4d07kvmn1dcvq73mn4r30c4vpshrqj4998azh7garjlz3kj"; depends=[callr cli desc ellipsis fs httr jsonlite lifecycle memoise pkgbuild pkgload rcmdcheck remotes rlang roxygen2 rstudioapi rversions sessioninfo testthat usethis withr]; }; + dexter = derive2 { name="dexter"; version="1.1.2"; sha256="08bh3av783f4psfyslxn8hmyvzdkpp3cwkfakhq91bipm4n51m7s"; depends=[DBI dplyr MASS Rcpp RcppArmadillo rlang RSQLite tidyr]; }; + dexterMST = derive2 { name="dexterMST"; version="0.9.2"; sha256="118y8a33l85klj6w5vj5mkr64xvmbf16n6ff3nsk7nx7v1f26x6d"; depends=[crayon DBI dexter dplyr igraph Rcpp RcppArmadillo rlang RSQLite tidyr]; }; dextergui = derive2 { name="dextergui"; version="0.2.2"; sha256="1g6qxjmxkrna10lahsdfilpjw587kk6zh8vs1saw9l27i3izpbi9"; depends=[Cairo DBI dexter dplyr DT ggExtra ggplot2 ggridges htmltools htmlwidgets jsonlite networkD3 RCurl readODS readxl rlang shiny shinyBS shinyFiles shinyjs tibble tidyr writexl]; }; dfCompare = derive2 { name="dfCompare"; version="1.0.0"; sha256="1lhx69j0bkjbnp5jz23hrbxjcf04vf3big4k593ixz003xs2077f"; depends=[]; }; dfConn = derive2 { name="dfConn"; version="0.2.1"; sha256="03yl00mqj6r7p2xmrwam2chgqlq4qpfcm85n4b3b41vrm27xg11g"; depends=[data_table doParallel fields foreach ggplot2 gplots gtools nlme Rcpp RcppArmadillo stringr]; }; - dfadjust = derive2 { name="dfadjust"; version="1.0.1"; sha256="0hzfkgf84j670vi4jfhlggbnzj96xa860212y3b0h5liwz1iazsy"; depends=[]; }; + dfadjust = derive2 { name="dfadjust"; version="1.0.2"; sha256="0l0i4w1yccfwr2kflx2c0i7zrkwlxdfmspjrd8xrbrx0xrz68j9s"; depends=[]; }; dfcomb = derive2 { name="dfcomb"; version="3.0-0"; sha256="1vsqlhmajv33nbnh8igisyv3rzzh2fdwbk5y0zlnrwvr79r19k5w"; depends=[BH Rcpp RcppProgress]; }; dfcrm = derive2 { name="dfcrm"; version="0.2-2.1"; sha256="01rn3zvi9xljmx48lkclckhnixian1vwq1frr8n784dsclp86spg"; depends=[]; }; dfexplore = derive2 { name="dfexplore"; version="0.2.1"; sha256="04nbhn59l1kas26nwj4qflkjvvr33sj1mm7zg7fhvya85gvlhrbf"; depends=[ggplot2]; }; - dfidx = derive2 { name="dfidx"; version="0.0-3"; sha256="01dgd0nbx9gs4l45lmlkilw8l4pympyh3xrsjfds3610417zgmw1"; depends=[dplyr Formula]; }; + dfidx = derive2 { name="dfidx"; version="0.0-4"; sha256="00h7hl6668aa5c4fb8r9q7h08672fb6ysi21n2fzich2n3lms984"; depends=[dplyr Formula]; }; dfmeta = derive2 { name="dfmeta"; version="1.0.0"; sha256="0ca48adfhaxac33jmxbynlyg3ak9l5mmjhlr69n4hnz6325gn9vb"; depends=[data_table ggplot2 lme4 plyr]; }; dfmta = derive2 { name="dfmta"; version="1.7-1"; sha256="13i4ck32z2p4plmy7lz2y4zakc1w915f5h6d9s6vj71212rrg9qm"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; dfoliatR = derive2 { name="dfoliatR"; version="0.2.0"; sha256="0z78nbb2m6qn2xj09j4wgpmid5va1jppdkknhl2l7v3yx8fmmk9i"; depends=[dplR dplyr forcats ggplot2 ggpubr magrittr MASS plyr purrr rlang tidyr]; }; dfoptim = derive2 { name="dfoptim"; version="2020.10-1"; sha256="0gy3wnvwvi9sydcbix226jds88n43r5nchvzrhqdag0j1bwpr9gy"; depends=[]; }; dformula = derive2 { name="dformula"; version="0.1"; sha256="0028qm3wsfpjbkpza5nb87pcm8cg0075jclcy6s4wfflizgfs6n4"; depends=[formula_tools]; }; dfped = derive2 { name="dfped"; version="1.1"; sha256="11ffsah14igba276m9d3cla0kgb3isizm5d7j1iqcd0wq23il7hq"; depends=[ggplot2 rstan]; }; - dfphase1 = derive2 { name="dfphase1"; version="1.1.1"; sha256="0bk4bl5lqd7m4mzk6kg71fmh918wcy85zghr3lyayxlk30fl4ppc"; depends=[lattice Rcpp robustbase]; }; + dfphase1 = derive2 { name="dfphase1"; version="1.1.3"; sha256="1nhcwx8ff3201yhy4rw06scicvdfzv07cjm1jdxzpsg5aqjb61v6"; depends=[lattice Rcpp robustbase]; }; dfpk = derive2 { name="dfpk"; version="3.5.1"; sha256="010rlxj66ar3y61fnm7ys3p6aimlr8ylqq4q4flzr9m88klz8701"; depends=[BH dfcrm ggplot2 PK Rcpp RcppEigen rstan StanHeaders]; }; dfrr = derive2 { name="dfrr"; version="0.1.4"; sha256="02hldg31pgicpqffvh61j83d0vcg84mjicirzqhn988wi8gps42r"; depends=[fda ggplot2 MASS plotly tmvtnorm]; }; dfvad = derive2 { name="dfvad"; version="0.3.0"; sha256="1n6hwpgnpd8vlv187ajl6js8z3yvl60h87q3kzgi9hvn9v73ip5z"; depends=[]; }; - dga = derive2 { name="dga"; version="1.2"; sha256="13mfampnghcs5xplzq69bw948lqhw561pn54j3gb0ydsg5bm5vmr"; depends=[chron]; }; + dga = derive2 { name="dga"; version="2.0.0"; sha256="0axvzgliqd5i200lchsm2afy7nhwzmha28asgps3wlfbvx5hyvy7"; depends=[chron Rcpp RcppArmadillo]; }; dglars = derive2 { name="dglars"; version="2.1.6"; sha256="13bnvinqgpmkisjri0sjsyzsh9nqplpry3n3galkv8dqhgpncq4w"; depends=[Matrix]; }; dglm = derive2 { name="dglm"; version="1.8.4"; sha256="09b74s7xdqv6y2qrlk67c7nfi7sw6azmpyvnan2rpbvxqlky9xgd"; depends=[statmod]; }; - dgmb = derive2 { name="dgmb"; version="1.2"; sha256="1r5md917wipx78n63x87fpvsc3h87c68cpacrrs9dhss199p1a5k"; depends=[abind MASS]; }; - dgodata = derive2 { name="dgodata"; version="0.0.2"; sha256="03cyiig8pn7fdkrkrd29cwy5g63bp57bpl9jmdxfi03smngzbz0m"; depends=[]; }; dgof = derive2 { name="dgof"; version="1.2"; sha256="02qnb3i131hx05k8l5n3xbl5sqmmc2fh19bsgcacgj8ixs4wyjvi"; depends=[]; }; dgumbel = derive2 { name="dgumbel"; version="1.0.1"; sha256="1qlc81rh6fcrai9ls27j83bjac26qhpfnchf9pdjz86dyclfjx43"; depends=[Rcpp RcppEigen]; }; - dhReg = derive2 { name="dhReg"; version="0.1.0"; sha256="07x2zfcskia79xvz40g30qd9f2d4bn2s26bw892s469v3hcdqzyp"; depends=[forecast future future_apply testthat]; }; + dhReg = derive2 { name="dhReg"; version="0.1.1"; sha256="0cfiy0wwd9b6h1qs6nw2m29zc3j2qqcybf879s5zbgnyxzp2ga2w"; depends=[forecast future future_apply testthat]; }; dhga = derive2 { name="dhga"; version="0.1"; sha256="1n48irj53g3kn451ak5ly50wxdn7qmzi2kib8clsvcx2n7mvpgcm"; depends=[VennDiagram]; }; dhglm = derive2 { name="dhglm"; version="2.0"; sha256="1918wkylldcdxjggly3a4yh4cv2nkig5bjfx0j79av633hahlg92"; depends=[boot car MASS Matrix sandwich]; }; dhh = derive2 { name="dhh"; version="0.0.1"; sha256="00kg2x1was85aq2vr15bak8y5p4mymbs8pbriijlbw64401djmb0"; depends=[]; }; @@ -7396,38 +7688,36 @@ in with self; { diagonals = derive2 { name="diagonals"; version="5.2.0"; sha256="0la1w9frnz5znljzcs9np4cn32rhb6zw6bc1cbnfq8n8nnrviy10"; depends=[]; }; diagram = derive2 { name="diagram"; version="1.6.5"; sha256="1r3lyl0h7mk9cfg8smr3jydfkjdawaphnxibkxfjqa7029vkxh79"; depends=[shape]; }; dialr = derive2 { name="dialr"; version="0.3.2"; sha256="0b0dbk25j5ixwn8gxf651bj2akjcy1rjr3c191h8wddn9y99ip06"; depends=[dialrjars rJava]; }; - dialrjars = derive2 { name="dialrjars"; version="8.12.6"; sha256="10sbhm8n48d2d0php3cm6yx5cssr2gk34pplvi9adv662214pmhx"; depends=[rJava]; }; + dialrjars = derive2 { name="dialrjars"; version="8.12.22"; sha256="0q00c3b8vksaq9028hm8b177ym0hzq5vcq8aqgmf583mj6fi5nv5"; depends=[rJava]; }; dials = derive2 { name="dials"; version="0.0.9"; sha256="0g9wj2py4wz703rh4p7hk8qxqnkm7zyrypv4qz4vaqziazjsmxks"; depends=[DiceDesign dplyr glue purrr rlang scales tibble vctrs withr]; }; diaplt = derive2 { name="diaplt"; version="1.3.0"; sha256="1kkqhkv3s8rrpqd05jidjdnqmlnb3s9f8rr34rfqj7k4nh0qzzcz"; depends=[]; }; - diathor = derive2 { name="diathor"; version="0.0.1"; sha256="1p9mx2ckz1l0fc9wman6m5mxn2inbv4qvqb4i0ab4j7a5nchz4l4"; depends=[ggplot2 stringdist tidyr vegan]; }; dice = derive2 { name="dice"; version="1.2"; sha256="0gic7lqnsdmwv3dbzwwmcwdfyfqlq8kpr2pciqphd1j2ligzwl3s"; depends=[gtools]; }; - diceR = derive2 { name="diceR"; version="1.0.0"; sha256="0x0ck76qx0w35pmbbalm8xqrscc4nhvcnzwk9viczn8qh9km7xq6"; depends=[abind assertthat class clue clusterCrit clValid dplyr ggplot2 infotheo klaR magrittr mclust NMF purrr RankAggreg Rcpp stringr tibble tidyr yardstick]; }; + diceR = derive2 { name="diceR"; version="1.0.3"; sha256="1p1fs3bgg84qbzlwi0lkgk0y0jixf04ypx7jdz92ljbjcryifvvd"; depends=[abind assertthat class clue clusterCrit clValid dplyr ggplot2 infotheo klaR magrittr mclust NMF purrr RankAggreg Rcpp stringr tidyr yardstick]; }; dichromat = derive2 { name="dichromat"; version="2.0-0"; sha256="1l8db1nk29ccqg3mkbafvfiw0775iq4gapysf88xq2zp6spiw59i"; depends=[]; }; dicionariosIBGE = derive2 { name="dicionariosIBGE"; version="1.6"; sha256="1rss1ydhcn6sma2lmlpq6s0h3dglwc20w499x1jzkcjnzc1rc7gl"; depends=[]; }; did = derive2 { name="did"; version="2.0.0"; sha256="11jfdh2c31dynajahrs0rncl8s8gb3lcdah0a0jvrsj5dh5m4yms"; depends=[BMisc DRDID ggplot2 ggpubr knitr Matrix pbapply]; }; didrooRFM = derive2 { name="didrooRFM"; version="1.0.0"; sha256="12clfnbm56jwldw0afb0nb0argnd97mx7369jiywhxy0p4xqibqq"; depends=[dplyr]; }; dief = derive2 { name="dief"; version="1.2"; sha256="1i4icdfqvw7imaj1fh392zmzfyz8aqlv9s5naqxm1pm0lqfxl6ca"; depends=[flux fmsb ggplot2 plyr]; }; dielectric = derive2 { name="dielectric"; version="0.2.3"; sha256="1p1c0w7a67zxp1cb99yinylk5r1v89mmpfybcy94ydydhydbhivk"; depends=[]; }; - dietr = derive2 { name="dietr"; version="1.1.0"; sha256="0mfp1zqmx34q09k5nbx3nlra06jpd9sym4avafxkaqsxd92avrcm"; depends=[rfishbase]; }; + dietr = derive2 { name="dietr"; version="1.1.1"; sha256="0grr9kii82xyyr9lkfyvlyfhybzyl287p298qm0zmc376syqkg5q"; depends=[rfishbase]; }; diezeit = derive2 { name="diezeit"; version="0.1-0"; sha256="0rq1k08byvqn99wpql7drnrcxlzcqrcxixh7bczbc8dv1hhsgk9i"; depends=[brew httr jsonlite]; }; - difNLR = derive2 { name="difNLR"; version="1.3.5"; sha256="0yhxgz3gdksxmi24l2jqg0kbjpi3rxwxi42aga38l7hhxzxjjxyd"; depends=[CTT ggplot2 msm nnet plyr reshape2 VGAM]; }; + difNLR = derive2 { name="difNLR"; version="1.3.7"; sha256="1fvil2zys3i8raqkmm8s5p6dyxziwcgchxr1m7q69flms6cpg8gv"; depends=[calculus CTT ggplot2 msm nnet plyr reshape2 VGAM]; }; difR = derive2 { name="difR"; version="5.1"; sha256="1cd5kaal5mjrbj1l9ki2wbqasdxphgc2yhaf4xwgbh1nr2zkhr02"; depends=[deltaPlotR lme4 ltm mirt]; }; difconet = derive2 { name="difconet"; version="1.0-4"; sha256="0cjadi4mnpfmy18vyp0dw55mnhs0zddf51w59gvq6gszk145z3bq"; depends=[data_table gplots mvtnorm stringr]; }; diffEnrich = derive2 { name="diffEnrich"; version="0.1.1"; sha256="19bq2frd2h8gh6mdy3pcwd54zzv170c0m1m3wnp5c4gadb9424qf"; depends=[dplyr ggnewscale ggplot2 here reshape2 rlang stringr]; }; diffIRT = derive2 { name="diffIRT"; version="1.5"; sha256="0kip6wz9l9q80qsqwf32pwz7d9vqin6dgfwf0nxlrlzf8xjsxgim"; depends=[statmod]; }; diffMeshGP = derive2 { name="diffMeshGP"; version="0.1.0"; sha256="1dc37hxh3fi27gw11kij57j78p87bza77s82niagdv6dqhldj5a4"; depends=[]; }; - diffcor = derive2 { name="diffcor"; version="0.6.2"; sha256="0p56p7740f8dnnb60zmh94pmq2pcgp70m88hz0029ai4wwsd4llr"; depends=[]; }; + diffcor = derive2 { name="diffcor"; version="0.6.4"; sha256="1svhj5qispc2fwjf06pxg0z0q85161wqaq2sgix70j55z6xw8jgb"; depends=[]; }; diffdepprop = derive2 { name="diffdepprop"; version="0.1-9"; sha256="0mgrm1isr26v2mcm6fkzc7443ji00vpnqmw4zngx81n7442b3cl2"; depends=[gee PropCIs rootSolve]; }; diffdf = derive2 { name="diffdf"; version="1.0.4"; sha256="03cr0gvspchdj49kiggsm6i9h5d9z07aswggj4n46lnyz52ihivj"; depends=[tibble]; }; diffeR = derive2 { name="diffeR"; version="0.0-6"; sha256="0ivdcfirs3jbd6m3rryq590szkhplm2kr9chjgcgd88ar5nrqfg7"; depends=[ggplot2 raster reshape2 rgdal]; }; diffee = derive2 { name="diffee"; version="1.1.0"; sha256="01lb1prz70mxgymhhsvx48kbfy69xyyaabsmfhf28af9wfb89662"; depends=[igraph pcaPP]; }; - diffeqr = derive2 { name="diffeqr"; version="1.0.0"; sha256="13ingj2afi2ckgqslk3jqgnqas5crwwdbmkv811ap2ys4cxka26p"; depends=[JuliaCall stringr]; }; + diffeqr = derive2 { name="diffeqr"; version="1.1.0"; sha256="0m4433im5jy45bj6znbsf9la51hw232yc0rx2g3zdv5m8277c8my"; depends=[JuliaCall stringr]; }; diffman = derive2 { name="diffman"; version="0.1.1"; sha256="08b4kqxfg8pmyl2xg8flb581s9wnkdcy5rrmrxp8a89y265qmirx"; depends=[data_table dplyr igraph Matrix progress Rcpp sf tidyverse]; }; - diffobj = derive2 { name="diffobj"; version="0.3.2"; sha256="0v18zz14g8ppzmj1d997rdmsfh327ml4wvpmfx168lravdsk5ym2"; depends=[crayon]; }; + diffmatchpatch = derive2 { name="diffmatchpatch"; version="0.1.0"; sha256="064p2xzv0x890pw24lm9fmafp0x93f3yv77ms2zabzlclfylzzb7"; depends=[cli Rcpp]; }; + diffobj = derive2 { name="diffobj"; version="0.3.4"; sha256="1z4yhfasjpi9rxl1lh9bny7yvs947a6hhc768azc1wwad748mk9q"; depends=[crayon]; }; diffpriv = derive2 { name="diffpriv"; version="0.4.2"; sha256="12q2v93369bshid83rsy1csbr9ay6rfpd8zdxm12zi7py3f9sjs8"; depends=[gsl]; }; diffr = derive2 { name="diffr"; version="0.1"; sha256="0ydwnpyzirynffsnvip667y0jqzy7yfqlfpqhb38xvmd9rmwfbp8"; depends=[htmlwidgets]; }; - diffrprojects = derive2 { name="diffrprojects"; version="0.1.14"; sha256="1mnqf5zs1w8dx9y5iwn4blyzb9j60ayzc04zxj5l8804nd527n25"; depends=[dplyr hellno magrittr R6 Rcpp RSQLite rtext stringb stringdist]; }; - diffrprojectswidget = derive2 { name="diffrprojectswidget"; version="0.1.5"; sha256="1h69mc1wayi80vz4b9cqydylf4kp9mxsigv05r0f903pqakdrzcw"; depends=[diffrprojects dplyr hellno htmlwidgets jsonlite magrittr tidyr]; }; diffusion = derive2 { name="diffusion"; version="0.2.7"; sha256="1j9s9vw5sc4k956bk4yp3bf4fnp7lhhkwcvlzvsh1w4dyaj8l35h"; depends=[dfoptim nloptr systemfit]; }; diffusionMap = derive2 { name="diffusionMap"; version="1.2.0"; sha256="1rvk7069brlm1s9kqj4c31mwwr3mw4hmhay95cjjjfmw5xclff2j"; depends=[igraph Matrix scatterplot3d]; }; diffusr = derive2 { name="diffusr"; version="0.1.4"; sha256="1f3h387kblw1xzdnxphwgfl1n7f6i07kk7kfslvbfxkalbish6ii"; depends=[igraph Rcpp RcppEigen]; }; @@ -7437,23 +7727,26 @@ in with self; { digitize = derive2 { name="digitize"; version="0.0.4"; sha256="1qw4x4z9vrs79sd9b2daw668nc6nvjl4qhayfqmd87yxa2ydv6x0"; depends=[readbitmap]; }; dils = derive2 { name="dils"; version="0.8.1"; sha256="1q6ba9j14hzf7xy895mzxc6n9yjgind55jf350iqscwzxf7ynp33"; depends=[igraph Rcpp]; }; dimRed = derive2 { name="dimRed"; version="0.2.3"; sha256="110d6y83ib1nfpxzmvkvb3fn3brskwkdbsk4dqrdrswrd4znxrg6"; depends=[DRR magrittr]; }; + dimensio = derive2 { name="dimensio"; version="0.2.0"; sha256="1dirfr47h1j8kwqjh4nvqgh575c1vs2pg99lfmyg9lwvya8zpjqz"; depends=[ggplot2 rlang]; }; dimensionsR = derive2 { name="dimensionsR"; version="0.0.2"; sha256="1g9yjrq7xnqh427kzmhhmdavykzxidv51i2wx2w0kwhl6fqdd2fk"; depends=[httr jsonlite]; }; dina = derive2 { name="dina"; version="2.0.0"; sha256="1sq7998xc5qhvd8clc8r32ch7axinh2a2dc7i1w2p148wv130yhd"; depends=[Rcpp RcppArmadillo rgen simcdm]; }; dinamic = derive2 { name="dinamic"; version="1.0"; sha256="0mx72q83bbwm10ayr3f1dzwr5wgz7gclw7rh39yyh95slg237nzr"; depends=[]; }; dineq = derive2 { name="dineq"; version="0.1.0"; sha256="1xrhrdc970f7hm9xng9z7xmshnmmz89cn3gmnyabzprx44ccr9sl"; depends=[boot Hmisc]; }; dint = derive2 { name="dint"; version="2.1.3"; sha256="0nxppn7gx4sjwn7jns5bwbqfid3jkbsx2lxi0rjdkbsawy77fc85"; depends=[]; }; + dipm = derive2 { name="dipm"; version="1.2"; sha256="1irrq1iidkqc6j7bg5c0fpgyfhnbay6b3fjv4h5amqgarchb1igg"; depends=[ggplot2 partykit survival]; }; diproperm = derive2 { name="diproperm"; version="0.1.0"; sha256="0vk4c64nfp5km6xnpbw0x4mxnlkqa1hi80pa5lcmimgjymqm56sa"; depends=[dplyr DWDLargeR ggplot2 gridExtra lemon Matrix sampling SparseM usethis]; }; - dipsaus = derive2 { name="dipsaus"; version="0.1.1"; sha256="174fkbv22ncb806f7jhyrxc70issly3xma80gzqf2ghp9jsk41n0"; depends=[base64enc base64url cli digest fastmap future future_apply jsonlite progressr R6 Rcpp RcppParallel rlang rstudioapi shiny startup stringr synchronicity]; }; - diptest = derive2 { name="diptest"; version="0.75-7"; sha256="0rcgycgp0bf8vhga1wwgfcz3pqs5l26hgzsgf2f97dwfna40i1p1"; depends=[]; }; + dipsaus = derive2 { name="dipsaus"; version="0.1.5"; sha256="0csxwlalybwiy45bcd4ih86flk0bh9gwzzz6qrpm7ksazhzmvy4l"; depends=[base64enc base64url cli digest fastmap future future_apply jsonlite progressr R6 Rcpp RcppParallel rlang rstudioapi shiny startup stringr synchronicity]; }; + diptest = derive2 { name="diptest"; version="0.76-0"; sha256="10629vwn6r2949jjrmj5slbb5v0vnm3w0v8mrl7ws68m2sxmx2jh"; depends=[]; }; dipw = derive2 { name="dipw"; version="0.1.0"; sha256="0nxjwiffi1ivafzha3c35kjk36ai7na0nbfl6x3gpsi2km7b84nd"; depends=[glmnet Matrix Rmosek]; }; directPA = derive2 { name="directPA"; version="1.5"; sha256="0k66x64fi26zlm82v59ya7x6l7ba3hpa5v9dq2ykb20a8zl6spla"; depends=[calibrate plotly]; }; - directlabels = derive2 { name="directlabels"; version="2020.6.17"; sha256="1b6v206kizz5rjw03chjvn40a7cqihjpk80h1h79z2x27hp1qi3f"; depends=[quadprog]; }; + directlabels = derive2 { name="directlabels"; version="2021.1.13"; sha256="0415kh9k2qzdwi8zb32fh2icl5wf5335kyj11cyfdmfxji39zv2w"; depends=[quadprog]; }; directotree = derive2 { name="directotree"; version="1.0.0"; sha256="1yv703mb3fnvjxr2rrxvb8x869hbbjx4l94qbbsmy0ssknayq60y"; depends=[collapsibleTree data_tree]; }; dirichletprocess = derive2 { name="dirichletprocess"; version="0.4.0"; sha256="1gspaynxq5czvnpni57swcqqy17lryjlh3cn9x0mghl527rkbpna"; depends=[ggplot2 gtools mvtnorm]; }; dirmcmc = derive2 { name="dirmcmc"; version="1.3.3"; sha256="117p3jvinmha7a2phcpzq38ig05kcranp15xbxqvv0cgh3c95fjr"; depends=[mcmcse]; }; dirmult = derive2 { name="dirmult"; version="0.1.3-4"; sha256="1r9bhw1z0c1cgfv7jc0pvdx3fpnwplkxwz8j8jjvw14zyx803rnz"; depends=[]; }; - disaggR = derive2 { name="disaggR"; version="0.1.11"; sha256="1gcckjjbhi83hrx8y5r5nqlh93hakpq6friiz8p5gsngvsnb1k3l"; depends=[ggplot2 Rcpp]; }; + disaggR = derive2 { name="disaggR"; version="0.2.1"; sha256="1i298ah7446yg02q2af0rn0miking4i1mxizdgldq8ghyw81m4wk"; depends=[ggplot2 rmarkdown scales shiny]; }; disaggregation = derive2 { name="disaggregation"; version="0.1.3"; sha256="04wmwwhmcgi1cdr8iyhilsphpzb7r5xs04vhqx5z01y7cgardivx"; depends=[cowplot doParallel dplyr foreach ggplot2 maptools Matrix raster RcppEigen rgdal rgeos sp sparseMVN splancs TMB]; }; + disastr_api = derive2 { name="disastr.api"; version="1.0.5"; sha256="1h5i6pwak16w0gdk8qjz4w9qpffjhzlsrvjkb4acrvgjgrsvz9kp"; depends=[httr jsonlite]; }; discSurv = derive2 { name="discSurv"; version="1.4.1"; sha256="0xi016ah8xc8bv92qvyslvx30anncrki49ccg3qw79yh5vzns1wk"; depends=[data_table functional mgcv mvtnorm]; }; discfrail = derive2 { name="discfrail"; version="0.1"; sha256="1ll8c0fwwmz2yw8w582422r8bk9lr1570d7m7w2n1flrnqpqmk8j"; depends=[Matrix numDeriv survival]; }; discgolf = derive2 { name="discgolf"; version="0.2.0"; sha256="07clh1awnibgrh7vl4a51r8dbya2rbmicm8v8x8mq8h8am2b3j0s"; depends=[crul jsonlite xml2]; }; @@ -7463,8 +7756,8 @@ in with self; { discnorm = derive2 { name="discnorm"; version="0.1.0"; sha256="00dkdxvj0fmlmr9l34ajvfv1jzlnyr9sdnnpgik8lhcj5a7h8l6f"; depends=[arules lavaan MASS pbivnorm psych sirt]; }; disco = derive2 { name="disco"; version="0.6"; sha256="1abvhf0yb4mw02j1krjb7q68jpwdnl2narcalf3vkjcbflcp76z3"; depends=[ggplot2 RColorBrewer tmod]; }; discord = derive2 { name="discord"; version="1.0.0"; sha256="1rxmc8jzifdyn8gf5z3xg5bfk9jv961dx0fcjf3axmzbw54h5s09"; depends=[broom dplyr janitor magrittr purrr rlang]; }; - discourseGT = derive2 { name="discourseGT"; version="1.1.2"; sha256="01f24n2ndjcjigxd61yhgrwq4c4ydlma45vviymavmpmyj0s9c48"; depends=[dplyr GGally ggplot2 ggpubr ggrepel igraph network]; }; - discoveR = derive2 { name="discoveR"; version="1.2.9"; sha256="0zvhg9vc5bawkfsf7sxky4zddyyjqrl741sjhlqzzmlwid7481p5"; depends=[colourpicker DT factoextra ggplot2 rmarkdown rstudioapi shiny shinyAce shinydashboard shinydashboardPlus shinyjs stringi zip]; }; + discourseGT = derive2 { name="discourseGT"; version="1.1.5"; sha256="0iwvxjd0zc9ahi4j1l7q08dwx9vfd4vcnzcv7knklgncnz14h5yc"; depends=[BiocManager dplyr GGally ggplot2 ggpubr ggrepel igraph network sna]; }; + discoveR = derive2 { name="discoveR"; version="2.2.2"; sha256="1p13n7fkhjqic6hjp70k7sg911zsvivqvrxi7ag8mxkprpzgv5j7"; depends=[cluster colourpicker config DT echarts4r ggdendro ggplot2 golem htmltools htmlwidgets plotly rlang scales shiny shinyAce shinycustomloader shinydashboard shinydashboardPlus shinyjs]; }; discoverableresearch = derive2 { name="discoverableresearch"; version="0.0.1"; sha256="0gw9fpmsqj1cj2qr7hqr86j28kjn3qfykdkkxrazj3dnv981xhhy"; depends=[dplyr magrittr ngram readr stopwords stringdist stringi synthesisr tm]; }; discreteMTP = derive2 { name="discreteMTP"; version="0.1-2"; sha256="13qsf1kc3rph0kkdkz31qj072www5dwjyk73lfpy141rzhcn1v1x"; depends=[]; }; discreteRV = derive2 { name="discreteRV"; version="1.2.2"; sha256="1lhf67cccr96zl3j1sysh2bv0pbgvkbgjdzm35fvrdm7k74ypjsi"; depends=[MASS plyr]; }; @@ -7472,12 +7765,12 @@ in with self; { discretization = derive2 { name="discretization"; version="1.0-1"; sha256="00vq2qsssnvgpx7ihbi9wcafpb29rgv01r06fwqf9nmv5hpwqbmp"; depends=[]; }; discrim = derive2 { name="discrim"; version="0.1.1"; sha256="1la96y8wy04p414njnzjsk5zx199qdix5hqbb0pv5k74mr1g2cqv"; depends=[dials parsnip purrr rlang tibble withr]; }; disdat = derive2 { name="disdat"; version="1.0-0"; sha256="1q8v40m0vjni3kx0f04qb99adxcx783p9lfixvvq6viz13v1ygcw"; depends=[]; }; - diseasemapping = derive2 { name="diseasemapping"; version="1.4.9"; sha256="0mhi3v52s57pd85li27cb5krvy40icghkayalhihg5k7zxqkgssv"; depends=[sp]; }; - diseq = derive2 { name="diseq"; version="0.0.14"; sha256="1h54crj6w0q9zwwrf7rgr6d9blmy3i9agq03dwzvzmpymgd5m1j7"; depends=[bbmle dplyr magrittr MASS rlang systemfit tibble tidyr]; }; - disk_frame = derive2 { name="disk.frame"; version="0.3.7"; sha256="12g9anjy04km8iyypf56nsq6v8mqfp99j0gfi9v8pc3sd6k9vnfn"; depends=[benchmarkme bigreadr bit64 crayon data_table dplyr fs fst furrr future future_apply globals glue jsonlite pryr purrr Rcpp rlang stringr]; }; + diseasemapping = derive2 { name="diseasemapping"; version="1.5.0"; sha256="0rq541n5nb9m3d1k04sml74r7p4j0648w28y5bl016rm4wghd3n6"; depends=[sp]; }; + diseq = derive2 { name="diseq"; version="0.2.1"; sha256="09m4nl15y1hllnp6b7v84ryfw8rl7g25h9f7qbp0f197rv7yqp0z"; depends=[bbmle dplyr magrittr MASS png Rcpp RcppGSL RcppParallel rlang systemfit tibble tidyr]; }; + disk_frame = derive2 { name="disk.frame"; version="0.4.1"; sha256="1ackk0qm2jc39112w48a6nciah4bgh2y0x8rz1mclivqrmlx8z1s"; depends=[benchmarkme bigreadr bit64 crayon data_table dplyr fs fst furrr future future_apply globals glue jsonlite pryr purrr Rcpp rlang stringr]; }; diskImageR = derive2 { name="diskImageR"; version="1.0.0"; sha256="1r19k5fdjn6vkn11p5df77fnxfqaz3nciiaai0f3pr2bgpfppzka"; depends=[subplex zoo]; }; dismo = derive2 { name="dismo"; version="1.3-3"; sha256="1jj9d78f251bxgrwbv1ycn677qnhvl40bfan12x8fhlaq4d36rgx"; depends=[raster Rcpp sp]; }; - dispRity = derive2 { name="dispRity"; version="1.5.0"; sha256="0synpjy8n7kzmv9drszj31067smi5s8672lvf07k02qkdhavhqgh"; depends=[ade4 ape castor Claddis geiger geometry geoscale mnormt phangorn phyclust scales vegan]; }; + dispRity = derive2 { name="dispRity"; version="1.6.0"; sha256="0fwwjfz4ljlr9135r9kdkd3djkawz2wjf8ki2xdjsbfh6s0c7gnc"; depends=[ade4 ape castor Claddis geiger geometry geoscale mnormt phangorn phyclust scales vegan]; }; disparityfilter = derive2 { name="disparityfilter"; version="2.2.3"; sha256="0dkk3qws631mf0g02di5rsrvh5954cykysyri0g8aqgik0j9dg06"; depends=[igraph]; }; displayHTS = derive2 { name="displayHTS"; version="1.0"; sha256="0mqfdyvn2c5c3204ykyq29ydldsq0kb3a1d7mrzqr7cvrj1ahlqa"; depends=[]; }; dispmod = derive2 { name="dispmod"; version="1.2"; sha256="16r6is0pchzc9mxpz0c44f72j76vsh3j9damalcxajrha06dkdq4"; depends=[]; }; @@ -7493,12 +7786,12 @@ in with self; { distdichoR = derive2 { name="distdichoR"; version="0.1-1"; sha256="0v19m3n1jgipg65yrv75rm4v27b5aq58cbsmbp7lxvfxmj5ra328"; depends=[boot emmeans nlme sn]; }; distdrawr = derive2 { name="distdrawr"; version="0.1.3"; sha256="1c8wznfml8k5gwyanfg7rqr22a96xx8rgm7f4z3bv5gsgsbps49y"; depends=[]; }; distfree_cr = derive2 { name="distfree.cr"; version="1.5.1"; sha256="0h7cywxnasxmqnl9f2f9wp4viwvv72hjx2drr78prqy3nn3lvqwx"; depends=[]; }; - distill = derive2 { name="distill"; version="1.1"; sha256="14j08i960kkj03p6qv0q6x68fm4zahzj7l88ada257n1ywxvbawa"; depends=[base64enc bookdown digest downlit htmltools jsonlite knitr lubridate mime openssl png rmarkdown rprojroot rstudioapi stringr whisker xfun xml2 yaml]; }; + distill = derive2 { name="distill"; version="1.2"; sha256="126ihjxsz8s6phqwapjnmzdklzz2mvr6phmh5kxpwq271fi8xq69"; depends=[base64enc bookdown digest downlit htmltools jsonlite knitr lubridate mime openssl png rmarkdown rprojroot rstudioapi stringr whisker xfun xml2 yaml]; }; distillery = derive2 { name="distillery"; version="1.2"; sha256="10nhh9p0hp294pp4aav0y0zsmir2qbn05sf3k52rmzmm36q2kc8y"; depends=[]; }; disto = derive2 { name="disto"; version="0.2.0"; sha256="09pafy8y1ifgglqmal32dy34acx06ypsq2bgwsn6fjiqr9kw401j"; depends=[assertthat broom dplyr factoextra fastcluster fastmatch ggplot2 pbapply proxy tidyr]; }; distory = derive2 { name="distory"; version="1.4.4"; sha256="1ljrs91h4v1h5lb295hjki8bmra2lg3d1bn5x731pnv43pf3ck06"; depends=[ape]; }; distr = derive2 { name="distr"; version="2.8.0"; sha256="1dyff4m33xmw6hxb3jxzr8vvajg3qz3rfcrfxjxwsswlddfz0zdv"; depends=[MASS sfsmisc startupmsg]; }; - distr6 = derive2 { name="distr6"; version="1.4.8"; sha256="1rkr7cb7mgyykvkr12mkq4j5ipx7sjfjfwfic0l20xzw8p5x1gfy"; depends=[checkmate data_table R6 R62S3 Rcpp set6]; }; + distr6 = derive2 { name="distr6"; version="1.5.2"; sha256="1w1wrfnqxbr9aiif7hza9bnmbn1vmglcbmij7wkk662hvkg1j6z5"; depends=[checkmate data_table R6 R62S3 Rcpp set6]; }; distrDoc = derive2 { name="distrDoc"; version="2.8.0"; sha256="1iq2gbfbsf3h279yh3fnqsi39gdw15vc6r1g33xcb8kgmmqmvf0p"; depends=[distr distrEx distrMod distrSim distrTeach distrTEst MASS RandVar startupmsg]; }; distrEllipse = derive2 { name="distrEllipse"; version="2.8.0"; sha256="1ymfa8xpgs8zjp4psiwmll5z0vji496fivxmcavspzxy31cw70wx"; depends=[distr distrEx distrSim mvtnorm setRNG startupmsg]; }; distrEx = derive2 { name="distrEx"; version="2.8.0"; sha256="1gwhsnlrnzyp2x97d9wfdy5pa9z3q5il934wjv4kxs9wsvkwsr5h"; depends=[distr startupmsg]; }; @@ -7507,8 +7800,9 @@ in with self; { distrSim = derive2 { name="distrSim"; version="2.8.0"; sha256="0g16mljlz7fnb5k6c9h5vplm3n51sdbybv9cifbia0y6p9zml383"; depends=[distr setRNG startupmsg]; }; distrTEst = derive2 { name="distrTEst"; version="2.8.0"; sha256="06rdcwfgbhc81zqisg414nj0kji59xvhm782b63hk54a8b2zwhh5"; depends=[distrSim setRNG startupmsg]; }; distrTeach = derive2 { name="distrTeach"; version="2.8.0"; sha256="1qgkd4yipk29q8k334fz97n6dxlxnsback7v5a05m6ragc37wzag"; depends=[distr distrEx startupmsg]; }; - distreg_vis = derive2 { name="distreg.vis"; version="1.7.0"; sha256="1rfv4ifhai6ig0x2xwca1pjin8vqp8k8jvbmj45rxdzg8b384zly"; depends=[bamlss betareg formatR gamlss gamlss_dist ggplot2 magrittr rhandsontable shiny]; }; - distributional = derive2 { name="distributional"; version="0.2.1"; sha256="0nxiiyr2nk80ac9x0fz2p3b8izrrmah708k9gmkihbi4bnspqhqx"; depends=[digest ellipsis farver generics ggplot2 lifecycle numDeriv rlang scales vctrs]; }; + distreg_vis = derive2 { name="distreg.vis"; version="1.7.1"; sha256="1y4axhv7hxvzq1ws7bja51m8z4x8a3xdvbwpwr4iqvsk4x9h59iy"; depends=[bamlss betareg formatR gamlss gamlss_dist ggplot2 magrittr rhandsontable shiny]; }; + distribglm = derive2 { name="distribglm"; version="0.4.1"; sha256="09gpkp7s8y2dcpjhqgi2nl6j8pmd500y89d8c8x8sxmh5mg8n5si"; depends=[readr]; }; + distributional = derive2 { name="distributional"; version="0.2.2"; sha256="0ps30ijlf0xwranxkq1z29d76d3zgy8drwxpnxp6ffmyma8mm3h2"; depends=[digest ellipsis farver generics ggplot2 lifecycle numDeriv rlang scales vctrs]; }; distributions3 = derive2 { name="distributions3"; version="0.1.1"; sha256="06wfyn37x2r00szfzgjpcxy5fhx72p2pf44llpymcsjyp8k790na"; depends=[ellipsis glue]; }; distributionsrd = derive2 { name="distributionsrd"; version="0.0.6"; sha256="0ykzxcxh5l9l5z3546iqlllryw2xyixz1hiynx19k8bsn8k7dxyp"; depends=[flexmix modeltools Rdpack]; }; distro = derive2 { name="distro"; version="0.1.0"; sha256="03b8mkjhxxh93675mmj443a83mgfwhkdar7dfbf3agf6aqnadn2g"; depends=[]; }; @@ -7516,56 +7810,54 @@ in with self; { distrr = derive2 { name="distrr"; version="0.0.6"; sha256="04lhrc92y6dqnfpqlmynjvn2dndzkknnvwsr5pf73dfpgv7n3s1f"; depends=[dplyr magrittr rlang tidyr]; }; disttools = derive2 { name="disttools"; version="0.1.7"; sha256="1wdcggphyxy58zyqdsyz2z3q4rb69wady63l79s1ivjwzgjrsxmi"; depends=[]; }; dittodb = derive2 { name="dittodb"; version="0.1.3"; sha256="0wkiy3vgqrpmc34hxw30rfgg01d941gxz8fr2h9i9gvddnxnywdc"; depends=[DBI digest glue lifecycle testthat]; }; - divDyn = derive2 { name="divDyn"; version="0.8.0"; sha256="11crhrcx38kn5d8ap2ijrn305369adg73iz5i7a4a7gmgizmmwyd"; depends=[Rcpp]; }; - divagis = derive2 { name="divagis"; version="1.0.0"; sha256="1kcz7i3h9xxpqhlq0rl08pgcwd16ygjjmm0jjv9knn2ggc3j1jzz"; depends=[rgdal sp]; }; - diveMove = derive2 { name="diveMove"; version="1.5.2"; sha256="10dj4ipd2yq1yg1x80vqrhzsgcn612jly85ciilyxl77479xj0x5"; depends=[geosphere KernSmooth plotly quantreg uniReg]; }; + divDyn = derive2 { name="divDyn"; version="0.8.1"; sha256="0ghcipx0wyp1750ggys8zq8nxpqm7hac6xvkyjs2dgqjmlh3mzz2"; depends=[Rcpp]; }; + diveMove = derive2 { name="diveMove"; version="1.5.4"; sha256="0niazlpi7n41fas8hap9h3xxyk0c011062xbs9zwdlzfk9vabylb"; depends=[geosphere KernSmooth plotly quantreg uniReg]; }; diveRsity = derive2 { name="diveRsity"; version="1.9.90"; sha256="11pfq3syvjmfwfimjc2jnlprcnynvargr4yjd8h0aa6qzgdrrx5q"; depends=[ggplot2 qgraph Rcpp shiny]; }; diverge = derive2 { name="diverge"; version="1.0.4"; sha256="18abm3348rkd4k2hyf8nykpis1m0ga16d4nprdc5xjj2ciaf2xa5"; depends=[truncnorm]; }; diverse = derive2 { name="diverse"; version="0.1.5"; sha256="10kmx3qv58xhqs1icsxqq0y0cm8y2hx9ysb65brd3hhg33alzvk3"; depends=[foreign proxy reshape2]; }; diversitree = derive2 { name="diversitree"; version="0.9-15"; sha256="1sk3sgn5hi04978s5s7gy6pzp28g3v9rglmiamlgs96c9wyyyff7"; depends=[ape deSolve Rcpp subplex]; }; - diversityForest = derive2 { name="diversityForest"; version="0.2.0"; sha256="16qwmz6fmh7jxypp5myj55fx6fwzzm2mq59v30spp2c2zd89aya7"; depends=[Matrix Rcpp RcppEigen]; }; - divest = derive2 { name="divest"; version="0.9.0"; sha256="0cx47xdh8g6b3kbpn22qhs07cak27dc5mjr7d45xjn5qs3xddjh5"; depends=[Rcpp RNifti]; }; + diversityForest = derive2 { name="diversityForest"; version="0.3.1"; sha256="12xwvzdl2rbr76izjnq6ygcrlf522vpgnrm2xz2nl1rwl9xr85im"; depends=[gam ggplot2 ggpubr MapGAM Matrix nnet RColorBrewer Rcpp RcppEigen rlang rms scales sgeostat survival]; }; + divest = derive2 { name="divest"; version="0.10.1"; sha256="0gbzji3v4qnv49mqqpadjskz265iwdvvd3mqwhmcq72125jh86sq"; depends=[Rcpp RNifti]; }; divo = derive2 { name="divo"; version="1.0.1"; sha256="06c4kjl6llvvdr2gk480jcmj2abmqwph7x4vk5nflxm7piimvg7v"; depends=[cluster]; }; - dixon = derive2 { name="dixon"; version="0.0-6"; sha256="1prvr16a9n7qyaznir2bl7mg6nlvbdv9pk75p3xipzjg36hwyam8"; depends=[spatstat splancs]; }; + dixon = derive2 { name="dixon"; version="0.0-7"; sha256="0crpzkshil8836axcywj0r95qmkv31vrw9gqnjqj3xgx6hml6xym"; depends=[spatstat spatstat_geom splancs]; }; dixonTest = derive2 { name="dixonTest"; version="1.0.2"; sha256="04d66nf47mllk5madqn6k36vc1gq2syp7kbif8cnf6imxr98xx50"; depends=[]; }; - diyar = derive2 { name="diyar"; version="0.2.0"; sha256="1vabx0vxb08ybpkidw4fch5sb79b9lhjpxm9sc6x7lywdfj3345w"; depends=[Rfast]; }; + diyar = derive2 { name="diyar"; version="0.3.0"; sha256="0v3i9m987x8akj6aqlb55l8bc6whha75hljai45w8mbqnf0wrsgv"; depends=[ggplot2 Rfast rlang]; }; dkDNA = derive2 { name="dkDNA"; version="0.1.1"; sha256="0ycyzn5bmhjl5idp0lndffkninpm9n23wrkrzi59ac8z8ghsnhf4"; depends=[]; }; dkanr = derive2 { name="dkanr"; version="0.1.3"; sha256="1zic7qhwq3s9w70zi1f6qyf7pzm69k5a1p5fd4n3z4nbga54njxd"; depends=[assertthat dplyr httr jsonlite purrr stringr tibble]; }; dlbayes = derive2 { name="dlbayes"; version="0.1.0"; sha256="058kkh67npai2ffrjdpjn4pzj8f233znl16nj6yx8wz8lkb17cb0"; depends=[expm GIGrvg glmnet LaplacesDemon MASS]; }; dlib = derive2 { name="dlib"; version="1.0.3.1"; sha256="1rchl4f3zj0azz8d4n139daba2gz6vnm60jq45vgc9gphk2mrnnb"; depends=[Rcpp]; }; dlm = derive2 { name="dlm"; version="1.1-5"; sha256="1aksm66sfa7ipl5xgs4j5giac7q2m744wjl40mva56xn6i674h4r"; depends=[]; }; - dlnm = derive2 { name="dlnm"; version="2.4.2"; sha256="1phn8xci456zx3jcjvy99ycki3gkzc4id0c45c37mdddxvk1bwmg"; depends=[mgcv nlme tsModel]; }; - dlookr = derive2 { name="dlookr"; version="0.3.14"; sha256="19aiwky40yj0xv3pwlbndw04d03hzw56zv60lxmzrm3bw1359fx2"; depends=[broom car classInt cli corrplot DMwR dplyr forcats ggplot2 gridExtra kableExtra knitr magrittr mice prettydoc purrr RcmdrMisc RColorBrewer reshape2 rlang rmarkdown rpart smbinning tibble tidyr tidyselect tinytex xtable]; }; + dlnm = derive2 { name="dlnm"; version="2.4.5"; sha256="0cblfj37klsz7ciwgh07ckrs6nvbcmdwgvp94sa5yk3l3sy444in"; depends=[mgcv nlme tsModel]; }; + dlookr = derive2 { name="dlookr"; version="0.4.4"; sha256="11qdfjxvx3rg1f2gzsavyy008wyzf9dbzjdvf0ah8qkr9s4pic17"; depends=[cli corrplot dplyr extrafont ggplot2 gridExtra hrbrthemes kableExtra knitr magrittr mice partykit prettydoc purrr RcmdrMisc rlang rmarkdown tibble tidyr tidyselect]; }; dlsem = derive2 { name="dlsem"; version="2.4.6"; sha256="1h3bwqqpfjkl41b2mbfhsj0pi9kri0h0i28wiid6arjrmm87nsf8"; depends=[graph Rgraphviz]; }; - dlstats = derive2 { name="dlstats"; version="0.1.3"; sha256="0inij1rzw8i683lyzvnjhfzrng7zx727y9wcijv6ny2fw64cdd6n"; depends=[ggplot2 jsonlite magrittr RColorBrewer scales]; }; - dm = derive2 { name="dm"; version="0.1.9"; sha256="0wla1rccs75igmqakkj9rsb3v0j1v2rax4rxvg9jr6vcrs4dzz7d"; depends=[backports cli DBI dplyr ellipsis glue igraph lifecycle magrittr memoise pillar purrr rlang tibble tidyr tidyselect vctrs]; }; + dlstats = derive2 { name="dlstats"; version="0.1.4"; sha256="1j415v3kajn269md046b05pwklqwm4rwk2f7q3mwax9yx4m5nc0n"; depends=[ggplot2 jsonlite magrittr RColorBrewer scales]; }; + dm = derive2 { name="dm"; version="0.2.0"; sha256="082gnz8ylcgrcvmfshvs8163vjs6vd9855fk76vn0z44jx8j67f1"; depends=[backports cli DBI dplyr ellipsis glue igraph lifecycle magrittr memoise pillar purrr rlang tibble tidyr tidyselect vctrs]; }; dma = derive2 { name="dma"; version="1.4-0"; sha256="003snr09hazszwqnvjrbv8vyz6ihgcfcfhrlshg451dddn920615"; depends=[MASS]; }; dmacs = derive2 { name="dmacs"; version="0.1.0"; sha256="1prw6h8sj6fcpajg6xwqhi8v5jfl74mbjdjrdy524miw56fh9h0r"; depends=[lavaan MplusAutomation]; }; dmai = derive2 { name="dmai"; version="0.4.0"; sha256="0ma89jl0l598sffpikvjj40f2djjcnjq29k6y1bav4dm2g51qgmq"; depends=[dplyr ggplot2 magrittr stringr tibble tidyr]; }; dmbc = derive2 { name="dmbc"; version="0.4.0"; sha256="1m8zwy18phlxpmlp8rf07d615fjg15gqs5wdfm78d49266032jay"; depends=[abind bayesplot coda ggplot2 ggrepel MCMCpack modeltools pcaPP Rcpp RcppArmadillo RcppProgress robustbase]; }; dmdScheme = derive2 { name="dmdScheme"; version="1.2.6"; sha256="093v2ypqmk6p23a8arl49c4fd60c8mgg6ns0daikjmp9qdm880aa"; depends=[digest EML knitr magrittr rappdirs readxl rlang rmarkdown stringr writexl xml2 yaml]; }; dml = derive2 { name="dml"; version="1.1.0"; sha256="0z1dalgxh5nhrac49vh60d5awzjylc8b8mn5fk379c324milm59l"; depends=[lfda MASS]; }; - dmm = derive2 { name="dmm"; version="2.1-6"; sha256="0y955dlfdpr6shfjwa96p4f9i9z9bq5jahp3k75fzyzyl7d9lvsj"; depends=[MASS Matrix nadiv pls robustbase]; }; + dmm = derive2 { name="dmm"; version="2.1-7"; sha256="0zn7d2lr2vig8q6h5dd5zk7ra1f0mkm6pszl3v06aghcflg63ng3"; depends=[MASS Matrix nadiv pls robustbase]; }; dmt = derive2 { name="dmt"; version="0.8.20"; sha256="0rwc8l9k2y46hslsb3y8a1g2yjxalcvp1l3v7jix0c5kz2q7917w"; depends=[MASS Matrix mvtnorm]; }; dmtools = derive2 { name="dmtools"; version="0.2.6"; sha256="0z77whal18sxmfqalv39w85vnc84c838yh3dp144v7w198n095fy"; depends=[dplyr httr lubridate magrittr progress purrr readxl tibble tidyr]; }; - dmutate = derive2 { name="dmutate"; version="0.1.2"; sha256="06gr49j5jz6ns1zydwsqysgkigi2sbm4hdd2jbb82f05rd9spyf3"; depends=[dplyr MASS]; }; + dmutate = derive2 { name="dmutate"; version="0.1.3"; sha256="1dxx4v9fg0cd2m5lwk3j6n9g6n9zqr7rs75yiz3m3q8cpw1pjqpk"; depends=[dplyr MASS]; }; dna = derive2 { name="dna"; version="2.1-2"; sha256="0l7i9640yd25cbxd3vbmlsqgk3pi2f7v6g5q0lrgycxl7jla9v1k"; depends=[]; }; dnet = derive2 { name="dnet"; version="1.1.7"; sha256="05mqgp8x2h6vjf8j9466kpng7bbga134c2y808qgdmjdnv9fcaxc"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; dng = derive2 { name="dng"; version="0.2.1"; sha256="0yi1fs4yvlsy3j128l7s5kwq8mhdd5fr74y2bzj7cjrxi7wgz2hg"; depends=[Rcpp]; }; dnr = derive2 { name="dnr"; version="0.3.5"; sha256="16s06jvwmvhxgvrmfav1xfszjrn7j2cm4jw5xyx6w5lb5434kzcq"; depends=[arm ergm glmnet igraph network sna]; }; - do = derive2 { name="do"; version="1.6.0.0"; sha256="0iv69vkdcs7mppmq5l0yxn2bq63j479gzya8bg7yhpqyr76lzyfv"; depends=[data_table plyr reshape2 tidyr tidyselect tmcn]; }; - doBy = derive2 { name="doBy"; version="4.6.8"; sha256="0r97kwsj6g87m7shgnjc5c9y71jkhiq4xd9q0s2bxl0vl92qqwvg"; depends=[broom Deriv dplyr ggplot2 magrittr MASS Matrix pbkrtest tibble]; }; - doFuture = derive2 { name="doFuture"; version="0.11.0"; sha256="1r1mdrrrjaj733rgminic4ihkmrn93mx2km26i684dszs3mx32f1"; depends=[foreach future globals iterators]; }; + do = derive2 { name="do"; version="1.7.0.0"; sha256="14z293acqxf100qlhmrrkf88fxzix0a02hbpi5f85kkaarhnis0q"; depends=[data_table plyr reshape2 rvest tidyr tidyselect tmcn xml2]; }; + doBy = derive2 { name="doBy"; version="4.6.10"; sha256="0vqmmxhr3mx8yyl38abvy0zqswfgn7jqgwvc5gdchdiq6v8flnfr"; depends=[broom curry Deriv dplyr ggplot2 magrittr MASS Matrix microbenchmark pbkrtest tibble]; }; + doFuture = derive2 { name="doFuture"; version="0.12.0"; sha256="1hqzdlgcrc5l6xjwdylsc9iiysi2wx8k1j1vmw3wryj26057c9y4"; depends=[foreach future globals iterators]; }; doMC = derive2 { name="doMC"; version="1.3.7"; sha256="0kdmfhp5m1wisjbfyl9d040jrmjmhcgjb0vdi536g2i9vixb5yny"; depends=[foreach iterators]; }; doMPI = derive2 { name="doMPI"; version="0.2.2"; sha256="0ahwm17p3gq1yvc8v6sr6sb8z7i6zws8d1pf46qynl0gd4amg938"; depends=[foreach iterators Rmpi]; }; doParallel = derive2 { name="doParallel"; version="1.0.16"; sha256="1cjf0mxrxgls5pl7aj22fv9j488craib1wkc9np4f3gkckwjdfzi"; depends=[foreach iterators]; }; doRNG = derive2 { name="doRNG"; version="1.8.2"; sha256="1jff27zzrvd1fd61x2m9468h8xn3s1c9f6wibviy5zdhj5dx9s9k"; depends=[foreach iterators rngtools]; }; - doRedis = derive2 { name="doRedis"; version="2.0.0"; sha256="0lw8j339az2dgcrahmkhp7k5dpvy1dalk1sfsjp2hzfhm3xqabc8"; depends=[foreach iterators redux]; }; doSNOW = derive2 { name="doSNOW"; version="1.0.19"; sha256="0f07b38cl7s61vwzkyqkzzsic9g4sw9k6ndbxk3g90l4ca0d1ljc"; depends=[foreach iterators snow]; }; dobin = derive2 { name="dobin"; version="1.0.2"; sha256="1vhvwdl7a8bf4q64jz8a6afm3smdn3jgxvs17jjlilarpdazl3p5"; depends=[pracma RANN]; }; dobson = derive2 { name="dobson"; version="0.4"; sha256="0xfn7s3wzrv1md40bdjrnjfiqyxg5c6lrcpnvayjdgrhxq161hhq"; depends=[]; }; - doc2concrete = derive2 { name="doc2concrete"; version="0.5.0"; sha256="0lcqqvzmab6s30crfvz9y67qx9lw7gywx2nrbbzpksvcz2y3ir7a"; depends=[dplyr english ggplot2 glmnet quanteda SnowballC stringr textclean textstem tm]; }; - doc2vec = derive2 { name="doc2vec"; version="0.1.0"; sha256="03m2ys16n45iz88iw1rva6jc4yxp381bjg8k69f81a71fg013473"; depends=[Rcpp]; }; + doc2concrete = derive2 { name="doc2concrete"; version="0.5.3"; sha256="0d10kjjnjcnljk4r5ip3a4z3h55if20flidiy26v352qf4593lnz"; depends=[english glmnet quanteda SnowballC stringi stringr textstem tm]; }; + doc2vec = derive2 { name="doc2vec"; version="0.2.0"; sha256="0249hm0103kxxsi4gks4h20wf6p00gbrk9jf8c148mbja1l56f6v"; depends=[Rcpp]; }; docdescriptR = derive2 { name="docdescriptR"; version="2020.1.0"; sha256="02sgbzhvjayf39r5lrx3krihzm263fnvwpjqm0jsqrq4d8pps3hb"; depends=[broom DescTools dplyr flextable magrittr nortest officer plotrix Rdpack tictoc]; }; docinfeR = derive2 { name="docinfeR"; version="2020.1.0"; sha256="08xa3f27giad3fikk8jywpm2p843zlb8a9znq3x47x6ivwybfllp"; depends=[broom flextable nortest officer Rdpack tictoc]; }; dockerfiler = derive2 { name="dockerfiler"; version="0.1.3"; sha256="128648s9lj96p3nlxwy4gs108w5kjcg6w48nfx3r52gb8w2z7948"; depends=[attempt glue R6]; }; @@ -7575,25 +7867,27 @@ in with self; { docstring = derive2 { name="docstring"; version="1.0.0"; sha256="19z5frhxbdc5c4vrkckgqbh9mx4d9w1icw8szsw9yadvbg48nlhl"; depends=[roxygen2]; }; docuSignr = derive2 { name="docuSignr"; version="0.0.3"; sha256="0q90z31svbdnvylfr0yj2f0gahvpi089c1d5llvwqy8qc5p9fbqw"; depends=[httr jsonlite magrittr]; }; documair = derive2 { name="documair"; version="0.6-0"; sha256="1pphcbx90n9xn8a7gvfrwzfapwqgpbl3gg2grm7chfxgcp7i99i2"; depends=[]; }; - document = derive2 { name="document"; version="3.3.0"; sha256="13m61a2q044q6iqcg0zjh2xjy530f7igjd3z0832iwks747s9rii"; depends=[callr checkmate desc rcmdcheck roxygen2 rstudioapi withr]; }; + document = derive2 { name="document"; version="3.3.1"; sha256="0sb705wah02r5hy2ivbjailk8fb1wxcvnn1zslwjiim0mxrk1354"; depends=[callr checkmate desc rcmdcheck roxygen2 rstudioapi withr]; }; documenter = derive2 { name="documenter"; version="0.1.1"; sha256="0y6zrvmb9bhc1ni4v89h9pq5ara8p2v4b35ylasia5s9x1y93mcp"; depends=[htmltools magrittr officer xml2 yaml]; }; docxtools = derive2 { name="docxtools"; version="0.2.2"; sha256="0ds8qy21x7cq9qmnn6gggzf8kxdphq7nf2mx5gqx829zgkripsfq"; depends=[dplyr ggplot2 lubridate purrr rlang stringr tidyr]; }; docxtractr = derive2 { name="docxtractr"; version="0.6.5"; sha256="1kki49g0sfhbx2d4swrkv21akws8ayrsd4h3v148xmzdlsrvhhiw"; depends=[dplyr httr magrittr purrr xml2]; }; - dodgr = derive2 { name="dodgr"; version="0.2.7"; sha256="0484bcbgzciwhb5afpcnygqr2pmf7wq9kxm73y137gjwgijqgg0g"; depends=[callr digest magrittr osmdata Rcpp RcppParallel RcppThread]; }; + dodgr = derive2 { name="dodgr"; version="0.2.8"; sha256="1xbsdrpqk2d2k9wykv7wxdzimnzyvdg6srm2ap80r9iirismsnzb"; depends=[callr digest magrittr osmdata Rcpp RcppParallel RcppThread]; }; doebioresearch = derive2 { name="doebioresearch"; version="0.1.0"; sha256="1rmvb6pa71frvjszpsjaw3ahm70kyykrq6zfjqk8smgcg397k9pi"; depends=[agricolae]; }; doex = derive2 { name="doex"; version="1.2"; sha256="1r999z30ipa04pgck0hfalqxihb1bj8sdhlkkhf4plb7maaz3qm3"; depends=[]; }; dominanceanalysis = derive2 { name="dominanceanalysis"; version="2.0.0"; sha256="0qxldvlgbysy9j17kb0a9p132a04a4j12h4m0r70zv2752fj24c0"; depends=[]; }; domino = derive2 { name="domino"; version="0.3.1"; sha256="0f67w0z5jy82kgm3l1rji430ayigw30vmmwp3i1nz0xibsx7jxv4"; depends=[]; }; + domir = derive2 { name="domir"; version="0.0.1"; sha256="1ydhvx24arb82z67ff4gmc5bmf4afnwqmp1y2wsk2jxj3s327598"; depends=[]; }; donut = derive2 { name="donut"; version="1.0.1"; sha256="17qiy9j0qm2q2gcysd5717bdl9nmkd7pd5z22pcj3icvxcpssval"; depends=[]; }; + doremi = derive2 { name="doremi"; version="1.0.0"; sha256="005kp6f4jh8y1ykhri3mjnvc9w66b1a51bji574rkbxd1ans6mal"; depends=[data_table deSolve futile_logger ggplot2 gridExtra lme4 lmerTest zoo]; }; dosearch = derive2 { name="dosearch"; version="1.0.6"; sha256="0ba3yrnysj29yrk9yah2xms56kg1qnkgajm74waixp8d3qazdfvg"; depends=[dagitty igraph Rcpp]; }; dosedesignR = derive2 { name="dosedesignR"; version="0.2.4"; sha256="0c8rilx4afih457f9gafgijm569g366lp4wms0vhc0f9kgr1z8h3"; depends=[DoseFinding DT ggplot2 lattice latticeExtra shiny shinyjs]; }; dosresmeta = derive2 { name="dosresmeta"; version="2.0.1"; sha256="0qdalzdk7q4wx3vl5f3i64m8cb7vhi4pqzghar32j0a7l6gla04z"; depends=[mvmeta]; }; dostats = derive2 { name="dostats"; version="1.3.2"; sha256="15j9sik9j5pic5wrp0w26xkrhi337xkbikw0k7sa4yfimw6f84w5"; depends=[]; }; - dotCall64 = derive2 { name="dotCall64"; version="1.0-0"; sha256="1b8p7m3w0m7bp977c6jz74xkd611cxg11j49yza59k5fp338scb9"; depends=[]; }; + dotCall64 = derive2 { name="dotCall64"; version="1.0-1"; sha256="1im5k8jbviwj2i42mq1kmjskh80isa7jr9w8i0fknidrzzy2h2zi"; depends=[]; }; dotdot = derive2 { name="dotdot"; version="0.1.0"; sha256="0d8inv2m7pkk6dnv9j9zai4lhghcg656l46d00rhp604rbhzlmw9"; depends=[]; }; - dotenv = derive2 { name="dotenv"; version="1.0.2"; sha256="13i8dimrgq9nxmmrxr42pacsiylj6dilwpa8ldnrfp4cl9zgrqas"; depends=[]; }; + dotenv = derive2 { name="dotenv"; version="1.0.3"; sha256="0dclwqg2hxdly8z3cckcskcll3dfax6g14h1xzjzdfwahhrbr5wb"; depends=[]; }; dotgen = derive2 { name="dotgen"; version="0.1.0"; sha256="12dvn52ggmkj2q6whi8s2hh9fpg7jcg20bgx32jxzh4cb1zxnksz"; depends=[mvtnorm]; }; - dotwhisker = derive2 { name="dotwhisker"; version="0.5.0"; sha256="034pvkc59jdjl27wirgb2cv84ajw5y2if20njzzp87nd4f9bb6br"; depends=[broom dplyr ggplot2 ggstance gtable purrr rlang stringr]; }; + dotwhisker = derive2 { name="dotwhisker"; version="0.6.0"; sha256="19a7y7al2a082gyldfa4llxxymhhvbddmaflil2sv1zbcxn6yfg5"; depends=[broomExtra dplyr ggplot2 ggstance gtable margins purrr rlang stringr]; }; doubcens = derive2 { name="doubcens"; version="1.1"; sha256="1hn65n67by3xqbcnaf5jja5pli0g6wpbbz2sfzd7i2nms7kiywhp"; depends=[]; }; double_truncation = derive2 { name="double.truncation"; version="1.7"; sha256="0hrb1qli7i4jhc705rb02zbq2nyk0i406bb8gpy4jrzygjjbq3g0"; depends=[]; }; doubt = derive2 { name="doubt"; version="0.1.0"; sha256="16avp0f7ks2zd4ckakvfm57zng2jk0fg3fz6vbm05lzhqymh6y30"; depends=[unglue]; }; @@ -7603,18 +7897,18 @@ in with self; { downscaledl = derive2 { name="downscaledl"; version="1.0"; sha256="0lqxngzpxj65b48j5w0n8dg6fp4lgg5zpgxc2wj6d9wh5f97l71b"; depends=[dplyr keras magrittr raster Rcpp RcppArmadillo rgdal rstack sp tensorflow]; }; downsize = derive2 { name="downsize"; version="0.2.2"; sha256="18b9shd79z0bsdnp0apqqwv6c73j4wnfiv41ywqz761nmxbldxbn"; depends=[magrittr R_utils]; }; dpa = derive2 { name="dpa"; version="1.0-3"; sha256="0dmwi68riddi1q4b10c12wx6n7pqfmv30ix5x72zpdbgm72v343h"; depends=[igraph sem]; }; - dparser = derive2 { name="dparser"; version="0.1.8"; sha256="1yx425s3iq03j043g41pyfp3cgmajb4qh50zirhd0qpplzwy8xj5"; depends=[digest]; }; + dparser = derive2 { name="dparser"; version="1.3.1-4"; sha256="1rjbli5ii5l6cpj3ah6r7cyqzdw0fm2qmr4kkw8cv02zryw0y8za"; depends=[digest]; }; dpcid = derive2 { name="dpcid"; version="1.0"; sha256="1gx8gyrxvm07mjiasl0b80y0x3crq6gy170v6s817d11jw44n86z"; depends=[]; }; - dplR = derive2 { name="dplR"; version="1.7.1"; sha256="1df4g9zz47h0flx5ww6bvlm364q81l2c5flzpa985sv87rq6cz4j"; depends=[digest lattice Matrix matrixStats plyr png R_utils signal stringi stringr XML]; }; + dplR = derive2 { name="dplR"; version="1.7.2"; sha256="1g57azixwv3c6x60l1kqdnzylf0ayv3s15wi0av2qcca35z3baa1"; depends=[digest lattice Matrix matrixStats plyr png R_utils signal stringi stringr XML]; }; dplRCon = derive2 { name="dplRCon"; version="1.0"; sha256="10xnawgnhxp5y949fxs1vvadc1qz2ldy0s9w9w7kf6iqh59d35sw"; depends=[]; }; - dplyr = derive2 { name="dplyr"; version="1.0.2"; sha256="0jnw18nw20gw3jvq3kvkf9mqn6b7mvgmys8g6350k5jwpygk5cbw"; depends=[ellipsis generics glue lifecycle magrittr R6 rlang tibble tidyselect vctrs]; }; + dplyr = derive2 { name="dplyr"; version="1.0.5"; sha256="0w3fr6sn0mw5mjs27669czpc8vpjj6ayrjavw8v0gd7ccsfa0hbm"; depends=[ellipsis generics glue lifecycle magrittr R6 rlang tibble tidyselect vctrs]; }; dplyr_teradata = derive2 { name="dplyr.teradata"; version="0.4.1"; sha256="0ygn8cq4dnmzzxfskcir7g0bksgby5sw2j135gvrk599z3v6avg1"; depends=[bit64 DBI dbplyr dplyr odbc]; }; dplyrAssist = derive2 { name="dplyrAssist"; version="0.1.0"; sha256="1lqizh70b1apyr4578917gv6s0i7p84ak96a57kvwipmh36a4ywn"; depends=[DT magrittr miniUI plyr rstudioapi shiny shinyAce shinyWidgets stringr tidyr tidyverse]; }; dpmr = derive2 { name="dpmr"; version="0.1.9"; sha256="1cnjywkvjb4fhbf4shjmsrq47f1fg2x21hcm1q5512bm0wg9i6jd"; depends=[digest httr jsonlite magrittr rio]; }; dppmix = derive2 { name="dppmix"; version="0.1.1"; sha256="1gq51kix0jln25gr6bffzdy24fhn6cd3gmyl3jlmvqvni4vwswy7"; depends=[mvtnorm]; }; dprint = derive2 { name="dprint"; version="0.0.4"; sha256="13bq6yjlp5p5rcsz684rqcigp42xnz3p5phnqmrhzm874gfzm8rj"; depends=[]; }; dpseg = derive2 { name="dpseg"; version="0.1.1"; sha256="19k7w6ln72qriwxdjx9a9cxpxbkqqja69r17zpwxz6qkw60ly4z9"; depends=[Rcpp]; }; - dqrng = derive2 { name="dqrng"; version="0.2.1"; sha256="0rp8q5zijlvaqmpnkwr314w9w40sj4fz7sqsdgsffcfvn42w2jg1"; depends=[BH Rcpp sitmo]; }; + dqrng = derive2 { name="dqrng"; version="0.3.0"; sha256="1fwsldqcri2lccna4icbmmlqic3w4xyjm7rn0xmikrsw4kzapvjb"; depends=[BH Rcpp sitmo]; }; dr = derive2 { name="dr"; version="3.0.10"; sha256="0dmz4h7biwrn480i66f6jm3c6p4pjvfv24pw1aixvab2vcdkqlnf"; depends=[MASS]; }; dr4pl = derive2 { name="dr4pl"; version="1.1.11"; sha256="0vv3h4sxw38grhr70s28sxkca20adnqdmpp8qqwlbr3dw950yaa3"; depends=[ggplot2 Matrix matrixcalc Rdpack tensor]; }; dracor = derive2 { name="dracor"; version="0.2.4"; sha256="0q7kwv60q32gj1b48r3ha0d539ddhw9jz3n62wvc8jr1na1v52lh"; depends=[Rcpp]; }; @@ -7622,17 +7916,19 @@ in with self; { dragonking = derive2 { name="dragonking"; version="0.1.0"; sha256="01b01wd1s2b8sa9f0kfbf2pbzhaqra7xxskigqh3vlj389xqm1id"; depends=[]; }; dragracer = derive2 { name="dragracer"; version="0.1.5"; sha256="19qvr01wxzw5ihgpy7lz13f3hylnmprziwnr50gkwj6p3zhc0swa"; depends=[]; }; dragulaR = derive2 { name="dragulaR"; version="0.3.1"; sha256="1cw5v7m1b4pxsizsjb3zdzhydxj577p6q5fcjklsvpzmiixzlyav"; depends=[htmlwidgets shiny shinyjs]; }; - drake = derive2 { name="drake"; version="7.12.7"; sha256="0ajvzw8j4pg5c8wji0d5jsdpk49mv7m4fh278mhdh2v972nfvkji"; depends=[base64url digest igraph rlang storr tidyselect txtq vctrs]; }; - drat = derive2 { name="drat"; version="0.1.8"; sha256="0dl52xxfy07ha3c945da1cna9m5cnidm9y4n46h6ysvcrq75wsyk"; depends=[]; }; + drake = derive2 { name="drake"; version="7.13.2"; sha256="1whgk3a4miqqdw2n9q5wn4zjhfsz2j53h9nlggc4rz7ny2agf15x"; depends=[base64url digest igraph rlang storr tidyselect txtq vctrs]; }; + drat = derive2 { name="drat"; version="0.2.0"; sha256="0dz086jpk8znwbimpj0s01ycg2sbqp2gwnp6kz47cadjp3p89x2n"; depends=[]; }; draw = derive2 { name="draw"; version="1.0.0"; sha256="0kbz8rcgygl4fhmljzaan5jl7wjvfljcaykm7q9lw9s6m78p06gz"; depends=[]; }; - drawsample = derive2 { name="drawsample"; version="0.1.1"; sha256="0kynj8wcaxpni39fn172f0wk1p65ilj3x0a949sgq4v3zzw3zqxb"; depends=[dplyr lattice psych tibble]; }; + drawer = derive2 { name="drawer"; version="0.1.0"; sha256="1h8z852a8dwbqn3in4ycmkf1h7599z5zmfklw6538xfawhxf614w"; depends=[bsplus glue htmltools magrittr shiny stringr]; }; + drawsample = derive2 { name="drawsample"; version="1.0.0"; sha256="0ygar9753vj2n4v19mf8qcqmrqnxs0czgy0bxbcszb4n5x6rmhq5"; depends=[dplyr lattice magrittr moments psych purrr readxl rlang shiny shinycssloaders shinydashboard tibble xlsx]; }; drc = derive2 { name="drc"; version="3.0-1"; sha256="0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y"; depends=[car gtools MASS multcomp plotrix scales]; }; dreamerr = derive2 { name="dreamerr"; version="1.2.3"; sha256="0g3gl4nzfw02alhyjw9flylfr2awyijjim50j1jdnp677zqlxkmf"; depends=[Formula]; }; - drf = derive2 { name="drf"; version="1.0.0"; sha256="1ja9f1g5afijcdp480zj6l0ffmixfsrcvxgdy5vrk6342hr229ks"; depends=[fastDummies Matrix Rcpp RcppEigen spatstat]; }; + drf = derive2 { name="drf"; version="1.1.0"; sha256="13b31rynknzirnvgygs1ar5968xdh8dhg60ibn0g359gnzadn7ad"; depends=[fastDummies Matrix Rcpp RcppEigen transport]; }; drfit = derive2 { name="drfit"; version="0.7.2"; sha256="03ahzmjzrkdrv36yj6vfg3g5bwn6lb7mlxmli68sixag5h83xq7f"; depends=[DBI drc MASS odbc qcc reshape2]; }; drgee = derive2 { name="drgee"; version="1.1.10"; sha256="0hy7887mvlxh73zk2yzp46bqakq924n940j21lw25jgygmzz1176"; depends=[data_table nleqslv Rcpp RcppArmadillo survival]; }; drhur = derive2 { name="drhur"; version="0.1.0"; sha256="1a13fpczvq0a93q2ldh2h42hk7firmcbr478vkli8y6d1bwlj567"; depends=[arm car dotwhisker gapminder ggeffects ggthemes gt interplot kableExtra knitr learnr likert modelsummary moments nnet ordinal performance scales summarytools tibble tidyverse]; }; drifter = derive2 { name="drifter"; version="0.2.1"; sha256="1xsp8cm02wd8zink0jqrdaii7s2dh0rw96rs6k8zr2g0341wmfba"; depends=[DALEX dplyr ingredients tidyr]; }; + drimmR = derive2 { name="drimmR"; version="1.0.0"; sha256="0782m6zy21hlvib9fw5gccx3dgswrhz15f35hgqx2prrvx2yqhi5"; depends=[Biostrings doParallel dplyr foreach future ggplot2 Rdpack reshape2 seqinr testthat tidyverse]; }; driveR = derive2 { name="driveR"; version="0.2.1"; sha256="1zc14j7aarxbw11p5gardqkwrab71b8wfrpd1q2g6r9dg98w146i"; depends=[caret GenomeInfoDb GenomicFeatures GenomicRanges org_Hs_eg_db randomForest rlang S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene]; }; drmdel = derive2 { name="drmdel"; version="1.3.1"; sha256="1bpm9jj9dxk2daxp1yb7pn9jd750p27qa84vdfxpacm5r0mggnys"; depends=[]; }; dropR = derive2 { name="dropR"; version="0.1"; sha256="0sw5lqlfdn64dbykxdhk1pz18f83if871vkapa2nxgcfiy79b0vs"; depends=[plyr shiny]; }; @@ -7640,20 +7936,21 @@ in with self; { drord = derive2 { name="drord"; version="1.0.0"; sha256="1mkawx21dyj5vgiba598ilpas0vmi5qypi0aa9489yrsl40ls7xn"; depends=[ggplot2 MASS ordinal VGAM]; }; drought = derive2 { name="drought"; version="1.0"; sha256="1rj3aycvkb0f85p12l356rlhid4zfzqkhks20x2hhwvpk8nhri8h"; depends=[copula]; }; drtmle = derive2 { name="drtmle"; version="1.0.5"; sha256="1gnzprdjs4aws5q92a0dmlfzpwi3in3rsylbwr0r6cnghymgs69s"; depends=[doFuture future future_apply future_batchtools np SuperLearner]; }; - drugCombo = derive2 { name="drugCombo"; version="1.1.1"; sha256="0f4akxmj5jd89jm7kzkmqksxmb6fqj7jawvm3hpw6limyry3mp4z"; depends=[BIGL Deriv ggplot2 minpack_lm nlme rgl]; }; drumr = derive2 { name="drumr"; version="0.1.0"; sha256="09xi3sf424bpq10fq25j209dylfbi1lfd911r44ffadkxzvp5p1s"; depends=[audio stringr]; }; ds = derive2 { name="ds"; version="4.0"; sha256="1iic5fb27cnhsa83zg28hydrhzc01i9z0711xvk95c3gv7mbfp2p"; depends=[]; }; - ds4psy = derive2 { name="ds4psy"; version="0.5.0"; sha256="0a8x3kji1divizl5wqidsy6wx8viyqx2gsi1s686dh4zdqfcw5rh"; depends=[cowplot ggplot2 unikn]; }; + ds4psy = derive2 { name="ds4psy"; version="0.6.0"; sha256="0jcnxd8j4myn70kv1ifm1rjrfazjhb13gfy0hpgkxkzp244bfyfq"; depends=[ggplot2 unikn]; }; dsa = derive2 { name="dsa"; version="0.74.18"; sha256="17pyr5jn6mjcch5cl22z8mg31anirmgdjs6k9vjmz5ar35fcb1vi"; depends=[dygraphs extrafont forecast ggplot2 gridExtra htmlwidgets R2HTML reshape2 rJava timeDate tsoutliers xtable xts zoo]; }; dsample = derive2 { name="dsample"; version="0.91.2.2"; sha256="18c0zxaqwgbn9kmkwlnicwd74ljy2sxj0b9ksif13pdlj3zn57h1"; depends=[MASS]; }; + dsb = derive2 { name="dsb"; version="0.1.0"; sha256="0zlzrcrg0gq6vsa5k1fgq8ryxqazgw7w363hb164wlml615z9lwy"; depends=[limma magrittr mclust]; }; dscore = derive2 { name="dscore"; version="1.4.0"; sha256="0vjrxdgss79pmd8vkarvgqqm465byz17r7r93k5i3923xm02kavr"; depends=[dplyr Rcpp RcppArmadillo stringr tidyr tidyselect]; }; dse = derive2 { name="dse"; version="2020.2-1"; sha256="170rxrniszs8h59ah4mn4mz8d7kzix4g3vlz4icd8w6bl40c6ykc"; depends=[setRNG tfplot tframe]; }; - dslabs = derive2 { name="dslabs"; version="0.7.3"; sha256="0fhd6zwa4lmgrrybywvj1vxd98a483yca605dj2pwipqifh1x6ka"; depends=[ggplot2]; }; + dsims = derive2 { name="dsims"; version="0.1.1"; sha256="08a0hmwqwbm28pds3gib42n94algmi50833cp5mg4ihh5hjdi9kk"; depends=[Distance dssd ggplot2 gridExtra mgcv mrds rgeos rlang rstudioapi sf sp]; }; + dslabs = derive2 { name="dslabs"; version="0.7.4"; sha256="05v51rckpfjz2cbms250sv0q34l0ip841w9ardvs51s2x7r8qypc"; depends=[ggplot2]; }; dslice = derive2 { name="dslice"; version="1.2.0"; sha256="1k9hxpmr563p8bpd9m991lx5ig366mzk9j1lzldci9pq4jiayin1"; depends=[ggplot2 Rcpp scales]; }; - dsm = derive2 { name="dsm"; version="2.3.0"; sha256="0b7jdhfrpkyjhxxlkgxsnnidmmpbb3jkx41iqmp08bxipbjyw4kr"; depends=[ggplot2 mgcv mrds nlme numDeriv plyr statmod]; }; + dsm = derive2 { name="dsm"; version="2.3.1"; sha256="0flmbypplk99n3b3lkai2lz162w4bnizw2bpdk91db53w2jfp3i9"; depends=[ggplot2 mgcv mrds nlme numDeriv plyr statmod]; }; dsmisc = derive2 { name="dsmisc"; version="0.3.3"; sha256="19760hcb5154rayhj72r48r7glh2qyaf178zkxplywmsw338kws4"; depends=[Rcpp stringr]; }; dsrTest = derive2 { name="dsrTest"; version="0.2.1"; sha256="1kljlfi7jf6fa8b5f3wxjsa9rlmzcp4qix3m2qyapz2lqd85mbb7"; depends=[asht exactci loglognorm]; }; - dssd = derive2 { name="dssd"; version="0.2.1"; sha256="0lfr3bb3nba6pkg13d3kiblbp4naqxcdkvdqsa0y1zlhak74cgcj"; depends=[plot3D rgdal sf]; }; + dssd = derive2 { name="dssd"; version="0.2.2"; sha256="07wf2q3vpapypc1hn7ryxyyhf7b9128blpyz2fgv72y1l64v2wpf"; depends=[plot3D rgdal sf]; }; dst = derive2 { name="dst"; version="1.4.1"; sha256="1cz1fcyxpyv0ywmwlqdhgj3nzidnzcaxc1nkh8y5mph9wm612c25"; depends=[]; }; dstack = derive2 { name="dstack"; version="0.2.1"; sha256="1xfrbz7bcmy5mpywjmn38lk3pmblad8wqic1jbvzn9pj2badn497"; depends=[base64enc bit64 httr rjson rlist uuid yaml]; }; dstat = derive2 { name="dstat"; version="1.0.4"; sha256="023jp0xdbg200ww1gnr3fzgjqd82acag0jps7q6j6m27q11psvgz"; depends=[]; }; @@ -7661,8 +7958,8 @@ in with self; { dti = derive2 { name="dti"; version="1.5.1"; sha256="08da7v7sl88g2jixfplvw9rc5rvlifq3fvyrgh9naa5jsmd8h5ia"; depends=[adimpro aws awsMethods gsl oro_dicom oro_nifti quadprog rgl]; }; dtp = derive2 { name="dtp"; version="0.1.0"; sha256="0qy8nrbq22bfbajkxq6blkq7583pc5mb392gmqb3c9daxmqn42vb"; depends=[Formula gtools plyr]; }; dtpcrm = derive2 { name="dtpcrm"; version="0.1.1"; sha256="0k25fm0z3snpx1v2kwd50svgnkjhn5c0hy1gnlw2lif6rjz1fzd9"; depends=[dfcrm diagram]; }; - dtplyr = derive2 { name="dtplyr"; version="1.0.1"; sha256="0jgisglpaj1n6jhwqwsa1583i4ifazqdd9hh581w5akx5p0f05mp"; depends=[crayon data_table dplyr rlang tibble tidyselect]; }; - dtrSurv = derive2 { name="dtrSurv"; version="1.1"; sha256="1wklfgzlvwv8c3rpff29w2liy4ahds61zrcig8bzjbifi6inqnq0"; depends=[survival]; }; + dtplyr = derive2 { name="dtplyr"; version="1.1.0"; sha256="0cn7vxn92dcxrnabccla6ppf5x7pxfz6pjlmamp0imfphmr1ns4r"; depends=[crayon data_table dplyr ellipsis glue lifecycle rlang tibble tidyselect vctrs]; }; + dtrSurv = derive2 { name="dtrSurv"; version="1.2"; sha256="104hz8nqn02rk2wg15j4qap7r7cq4162agjaflv2dxmyb9zj0cb2"; depends=[survival]; }; dtree = derive2 { name="dtree"; version="0.4.2"; sha256="1cpv0pyf515610djxzfw1c83p3alk5a93clg4x9gk7a7qy4cyhr1"; depends=[caret evtree party partykit rpart]; }; dtt = derive2 { name="dtt"; version="0.1-2"; sha256="0n8gj5iylfagdbaqirpykb01a9difsy4zl6qq55f0ghvazxqdvmn"; depends=[]; }; dttr2 = derive2 { name="dttr2"; version="0.3.0"; sha256="1irr0cpkls2fkck07az24yqc8llgw7q1nh7km0cm31dr4zxnj0hf"; depends=[chk hms lifecycle]; }; @@ -7671,10 +7968,11 @@ in with self; { dtwclust = derive2 { name="dtwclust"; version="5.5.6"; sha256="05dszmj89id2hk9apxa7721737s6292w2l7vazj7aqwk1jyghjpm"; depends=[bigmemory clue cluster dplyr dtw flexclust foreach ggplot2 ggrepel Matrix nloptr proxy Rcpp RcppArmadillo RcppParallel RcppThread reshape2 RSpectra shiny shinyjs]; }; dual = derive2 { name="dual"; version="0.0.3"; sha256="1alxh9mj610m7wgr6a97mpzy5ia9vzckhz6wmxyix7xh9mzbn1gw"; depends=[]; }; dualtrees = derive2 { name="dualtrees"; version="0.1.4"; sha256="05mxwiwnv48jf6ya5qmfc7g2w8wkzhk56k9g0gr2m4cpfab7d5h2"; depends=[]; }; - duawranglr = derive2 { name="duawranglr"; version="0.6.5"; sha256="04w8ll6p8m0ljcp96sfp028afgxddk4wyncfdwiywi0ps34zh084"; depends=[digest dplyr haven readr readxl]; }; + duawranglr = derive2 { name="duawranglr"; version="0.6.7"; sha256="0hxmvyl81xlp3vv1w7462cjfa9hdz5lki0p5pn0ik7dv5aap3wbq"; depends=[digest dplyr haven readr readxl]; }; dub = derive2 { name="dub"; version="0.2.0"; sha256="066lzyk44380mf17vx4db4a3a4rs7zl85mj5hjg172khjbqnbixw"; depends=[]; }; - duckdb = derive2 { name="duckdb"; version="0.2.3"; sha256="0nks1916kan1gpkk85gfcm7zklk100msfb83620j4i8szsbmz42d"; depends=[DBI]; }; + duckdb = derive2 { name="duckdb"; version="0.2.5"; sha256="060rqmfm2aa6b0xiw0wsabl9hnmfdv4mxlgkawfh9nmw5nr57fhk"; depends=[DBI]; }; duckduckr = derive2 { name="duckduckr"; version="1.0.0"; sha256="1wki8xvqp5hr27iafd9jbryl9faywfkdkpn0pa0afywbic39k2cm"; depends=[crul jsonlite]; }; + dumbbell = derive2 { name="dumbbell"; version="0.1"; sha256="0v0b4wbfskvcnzx10z9v4rf3mq8ccswz63pd6i1z7mggnwv38ps5"; depends=[data_table dplyr ggplot2 rlang rstatix tidyr tidyverse]; }; dummies = derive2 { name="dummies"; version="1.5.6"; sha256="01f84crqx17xd6xy55qxlvsj3knm8lhw7jl26p2rh2w3y0nvqlbm"; depends=[]; }; dummy = derive2 { name="dummy"; version="0.1.3"; sha256="081a5h33gw6ym4isy91h6mcf247c2vsdygv9ll07a3mgjcjnk79p"; depends=[]; }; dundermifflin = derive2 { name="dundermifflin"; version="0.1.1"; sha256="0rp8p4ln92kfxkczl7vi9r2jhxb1ky203s02940cjjkczsphpcc1"; depends=[crayon stringi]; }; @@ -7682,11 +7980,12 @@ in with self; { dupiR = derive2 { name="dupiR"; version="1.2"; sha256="0p649yw7iz6hnp7rqa2gk3dqkjbqx1f6fzpf1xh9088nbf3bhhz3"; depends=[plotrix]; }; dupree = derive2 { name="dupree"; version="0.3.0"; sha256="0q8c0z1yhym20rhfjrc8n03gk458z0n8axx013rcwk1vc2zwk670"; depends=[dplyr lintr magrittr purrr rlang stringdist tibble]; }; durmod = derive2 { name="durmod"; version="1.1-4"; sha256="0d721sbxjfh00gpxd4hj8iq04awfd0pcd6bw8cv7kny21l2f3w44"; depends=[data_table mvtnorm nloptr numDeriv Rcpp]; }; + dvir = derive2 { name="dvir"; version="2.0.0"; sha256="0y0i0jmpx2v70swivr0sg2g4xanpnm0a7dyj3s0212x4lp4j1yx2"; depends=[forrel pedprobr pedtools]; }; dvmisc = derive2 { name="dvmisc"; version="1.1.4"; sha256="01v6sixx0f3nrn6ymfifb3pvd2msfrwm21kmdv38laxq29vc4rsi"; depends=[cubature data_table dplyr ggplot2 MASS mvtnorm pracma rbenchmark Rcpp survey tab]; }; dvqcc = derive2 { name="dvqcc"; version="0.1.0"; sha256="011mwdwh046wninfjdy00wxn312ykzn90nz9fz3l7c5cw9gzzfkg"; depends=[ggplot2 tsDyn]; }; dwdradar = derive2 { name="dwdradar"; version="0.2.3"; sha256="01xk058d5sfgknyplg65xplkhqi79mn3p5p5fjrv4vis0mq0dsvq"; depends=[]; }; dwlm = derive2 { name="dwlm"; version="0.1.0"; sha256="0n5dil9qvyy4gish3wnv8bzq0ci1p0dr2vmbbadl29jl7rd1v0rc"; depends=[]; }; - dyads = derive2 { name="dyads"; version="1.1.3"; sha256="1spkypcm92pipz36rqswca50gihj3vpv0y34rjyaqwfx88b3dwp6"; depends=[CholWishart MASS mvtnorm RcppZiggurat Rfast]; }; + dyads = derive2 { name="dyads"; version="1.1.4"; sha256="1k043cd3rqi89czmk0y5q9j54dhp0ndjj8jij9nww2gfqq1ydqx0"; depends=[CholWishart MASS mvtnorm RcppZiggurat Rfast]; }; dycdtools = derive2 { name="dycdtools"; version="0.2.0"; sha256="16aiv0f6rsrpl8vym490w67had3isn9xbcyfiaa8vpgy8p80ymyr"; depends=[dplyr ggplot2 hydroGOF lubridate ncdf4 R_utils RColorBrewer tidyr]; }; dydea = derive2 { name="dydea"; version="0.1.0"; sha256="15alr3f6wkkpjd5wmcjazi58yc8gwcqr662mjwlfg15r94fzqrlg"; depends=[Chaos01]; }; dygraphs = derive2 { name="dygraphs"; version="1.1.1.6"; sha256="022j007mzfa9k2n31yg4aizcsf571vv3jip092h23rqj03rk3ly3"; depends=[htmltools htmlwidgets magrittr xts zoo]; }; @@ -7694,45 +7993,47 @@ in with self; { dynBiplotGUI = derive2 { name="dynBiplotGUI"; version="1.1.6"; sha256="04026jz4vdyj2a2kry5kk5k84cy4vqqrcn328hxwnwh7r8i7klvn"; depends=[tcltk2]; }; dynCorr = derive2 { name="dynCorr"; version="1.1.0"; sha256="0l5k764j1zhsqpgp0ndihah63hsk3zv9hviixfmh4h3i0sr0q52p"; depends=[lpridge]; }; dynRB = derive2 { name="dynRB"; version="0.15"; sha256="0fa6g4aj2cncg6mi0yc2yn6321qi7fz9d9cvqrnxhcnbbghdyzq9"; depends=[corrplot dplyr foreign ggplot2 RColorBrewer reshape2 vegan]; }; - dynaSpec = derive2 { name="dynaSpec"; version="1.0.0"; sha256="153pwzznkj0cm2kfh4s7k4k6yqj4rp0lvbrcb81rvqv2kvxg6i7m"; depends=[ggplot2 NatureSounds pbapply png seewave tuneR]; }; + dynaSpec = derive2 { name="dynaSpec"; version="1.0.1"; sha256="0wzfy50602wlsh4sbfjadsr01f3az2lvk5c4px3qmcvv5gybd6w0"; depends=[ari av gganimate ggplot2 magrittr NatureSounds pbapply png scales seewave tuneR viridis]; }; dynaTree = derive2 { name="dynaTree"; version="1.2-10"; sha256="1ng672mlv98xnsbd4xq70hxc8j158la4n63y46rw74granaz29ya"; depends=[]; }; dynamac = derive2 { name="dynamac"; version="0.1.11"; sha256="0dzw4h128z53vwdpkikhxqil0xjrcjrp1zmz0fy2qhq0n74sdyar"; depends=[lmtest MASS]; }; dynamicGraph = derive2 { name="dynamicGraph"; version="0.2.2.6"; sha256="1xnsp8mr3is4yyn0pyrvqhl893gdx2y1zv8d2d55aah2xbfk0fjj"; depends=[ggm]; }; dynamicTreeCut = derive2 { name="dynamicTreeCut"; version="1.63-1"; sha256="1fadbql7g5r2vvlkr89nlrjxwp4yx4xrdqmv077qvmnx9vv0f4w3"; depends=[]; }; - dynamichazard = derive2 { name="dynamichazard"; version="0.6.7"; sha256="17zsn11b7gf8hx13f8sy88hdkbdzc1a1hszhbwfllpipd9pwzsyb"; depends=[boot Rcpp RcppArmadillo survival]; }; + dynamichazard = derive2 { name="dynamichazard"; version="0.6.8"; sha256="0wg4s78l52z85yzfmzl87zlzxnyir5x56jqhb9q133i26mlpid96"; depends=[boot Rcpp RcppArmadillo survival]; }; dynatopmodel = derive2 { name="dynatopmodel"; version="1.2.1"; sha256="0lpfhj69bvagqzzg2kjqvn9xx8f93ii34flrrns20z3bxla6gds9"; depends=[deSolve lubridate maptools raster rgdal rgeos sp topmodel xts zoo]; }; dyncomp = derive2 { name="dyncomp"; version="0.0.2-1"; sha256="13wp2k8nbgrbrqng2dmgy0ixgidk51wq9y7mv5pdbvdajxdsyh11"; depends=[zoo]; }; - dyndimred = derive2 { name="dyndimred"; version="1.0.3"; sha256="03znghb5nygggwfmy9id07fn1wfkhwyzyzahdrlx68pg03dhlbg5"; depends=[dynutils irlba lmds]; }; + dyndimred = derive2 { name="dyndimred"; version="1.0.4"; sha256="1rj45bgms1x0zm1xjw2ylm45w9xnd68pmgb8dckzkszqg27d0fbh"; depends=[dynutils irlba lmds tibble]; }; dynetNLAResistance = derive2 { name="dynetNLAResistance"; version="0.1.0"; sha256="018y3m648ni31rlisjfnrx1d10mm48wpxanlnnxxpnqxjcywg2x8"; depends=[doParallel foreach igraph]; }; - dyngen = derive2 { name="dyngen"; version="0.4.0"; sha256="1qc701m52852xmbpldpxljbfjsljnba4dwap80ibqil4cl8l66px"; depends=[assertthat dplyr dynutils furrr ggplot2 ggraph ggrepel GillespieSSA2 igraph lmds Matrix patchwork pbapply purrr rlang tibble tidygraph tidyr viridis]; }; + dyngen = derive2 { name="dyngen"; version="1.0.1"; sha256="0cgq3f6x2q2m9gy6igaimk6kch7vjc3nqrp4xln0safqwbm3d6rc"; depends=[assertthat dplyr dynutils ggplot2 ggraph ggrepel GillespieSSA2 igraph lmds Matrix patchwork pbapply purrr rlang tibble tidygraph tidyr viridis]; }; dynia = derive2 { name="dynia"; version="0.2"; sha256="1swip4kqjln3wsa9xl0g92zklqafarva923nw7s44g4pjdy73d5l"; depends=[]; }; dynlm = derive2 { name="dynlm"; version="0.3-6"; sha256="1g8qsb5m69yn35sm0shd97vbnbpqfkjkd7lbkwch1gpfxkld53zq"; depends=[car lmtest zoo]; }; dynmix = derive2 { name="dynmix"; version="1.0"; sha256="0rv787yn264dsp6hpyzwfrgc3p0rp2vhklkdszs9fwy3s4x5177w"; depends=[MASS Rcpp RcppArmadillo zoo]; }; dynpanel = derive2 { name="dynpanel"; version="0.1.0"; sha256="073kfl5g4d7v8wd2qnpixqrxbac3cqj35z03ax2zlb8h2afa7j62"; depends=[gtools]; }; - dynparam = derive2 { name="dynparam"; version="1.0.1"; sha256="15g0divjrslp7yv1h0lv4ikqix40jn97b6rhy7wvmx2xr3vv8p7h"; depends=[assertthat carrier dplyr dynutils magrittr purrr stringr tibble tidyr]; }; + dynparam = derive2 { name="dynparam"; version="1.0.2"; sha256="12cclb8r13gn407197sw5gx2vfd0qc69mp16jam9chybxbj3pvx0"; depends=[assertthat carrier dplyr dynutils magrittr purrr stringr tibble tidyr]; }; dynpred = derive2 { name="dynpred"; version="0.1.2"; sha256="111ykasaiznn3431msj4flfhmjvzq7dd1mnzn1wklc5ndix1pvf9"; depends=[survival]; }; dynprog = derive2 { name="dynprog"; version="0.1.1"; sha256="11zsx2c4hv7k22pw85aa01zk4r0qpzwnf73ynylkfxfbi87rda9s"; depends=[rlang]; }; - dynr = derive2 { name="dynr"; version="0.1.15-25"; sha256="1kwrx1wg7hwgwkdgws8pvdv2yj5m77xp7fnpxlj50c7xm3chjm78"; depends=[car deSolve fda ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 stringi tibble xtable]; }; + dynr = derive2 { name="dynr"; version="0.1.16-2"; sha256="0k9lvrxdwfjnwbln6lv2qhqr55xrxzkw8k6b2dx1dqz76a2qr2n7"; depends=[car deSolve fda ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 stringi tibble xtable]; }; dynsbm = derive2 { name="dynsbm"; version="0.7"; sha256="169yk539vynjbn89q6vs3l3fx7hk8n3i1msa4jws5vypgljc2rir"; depends=[RColorBrewer Rcpp riverplot]; }; dynsim = derive2 { name="dynsim"; version="1.2.1"; sha256="0nkxn9v4f353fhcn1vsdrh29mrms10zid63b84flg3c6hvc0x4qr"; depends=[ggplot2 gridExtra MASS]; }; dynsurv = derive2 { name="dynsurv"; version="0.4-2"; sha256="0gy9q7l7k37bxm3d37adpvqa45lvr048a309jqc052f179v38mlb"; depends=[BH data_table ggplot2 nleqslv splines2 survival]; }; - dynutils = derive2 { name="dynutils"; version="1.0.5"; sha256="1vcnz0yrss64i8pw459z2kp17b0fqgw41rpxbzpixhsqsz9sy22x"; depends=[assertthat crayon desc dplyr magrittr Matrix proxyC purrr Rcpp remotes stringr tibble]; }; - dynwrap = derive2 { name="dynwrap"; version="1.2.1"; sha256="1hcc2svsw52nvhyp9zw4iwrn88rpvjk424ckin0g6fyp5afdyfsk"; depends=[assertthat babelwhale crayon dplyr dynparam dynutils glue igraph magrittr Matrix processx purrr readr reshape2 stringr testthat tibble tidyr yaml]; }; - e1071 = derive2 { name="e1071"; version="1.7-4"; sha256="02935xcscjhb0jmnvh44hxlpjcgladrcr0gpz1jxq07m0qdqgaz6"; depends=[class]; }; + dynutils = derive2 { name="dynutils"; version="1.0.6"; sha256="0iqhwswla31gg3gz0gcnn8fwfb7yq0jj4brbximhbf3306h0dirx"; depends=[assertthat crayon desc dplyr magrittr Matrix proxyC purrr Rcpp remotes stringr tibble]; }; + dynwrap = derive2 { name="dynwrap"; version="1.2.2"; sha256="0jsikx274nyjq4w286j4wqxrwyv6hvgx923clvdm6ygng1pn1cfr"; depends=[assertthat babelwhale crayon dplyr dynparam dynutils glue igraph magrittr Matrix processx purrr readr reshape2 stringr tibble tidyr yaml]; }; + e1071 = derive2 { name="e1071"; version="1.7-6"; sha256="0blfnv3m5k5xm9bfx1v5awvagqlhqaqpabrvzplf4244c3j259qa"; depends=[class proxy]; }; eAnalytics = derive2 { name="eAnalytics"; version="0.1.4"; sha256="15hhd4q2yxzq3a3awvk81ixa43hk519ym8ap7v1ahghyr0njnyyf"; depends=[dplyr DT energyr googleVis leaflet plotly shiny shinydashboard shinytest shinyWidgets]; }; - eBsc = derive2 { name="eBsc"; version="4.12"; sha256="0mvvw9z9qivzwkk6gwblavj175jc2a96zsplcifil2rgsr165ni8"; depends=[Brobdingnag MASS Matrix nlme Rcpp RcppArmadillo]; }; + eBsc = derive2 { name="eBsc"; version="4.13"; sha256="0n4v07462kxcsyjdy0cjbkn48ryzfnrvj28gxpsxwzn2sddfpl86"; depends=[Brobdingnag MASS Matrix nlme Rcpp RcppArmadillo]; }; eChem = derive2 { name="eChem"; version="1.0.0"; sha256="0wmf204hqd4s5har5l9bkcbrbmbqbb8m11w2aivi2gs98f3hy51p"; depends=[animation plot3D]; }; eDMA = derive2 { name="eDMA"; version="1.5-3"; sha256="0wyp81si6lcispqng4c7lii22qbyblvijgnlxvcsnkcxj5hpm76j"; depends=[Rcpp RcppArmadillo xts zoo]; }; + eFRED = derive2 { name="eFRED"; version="0.1.0"; sha256="1sqhcwxbi2gxgznz0z3iyvllalq9qwm18bc60dr6y2wvcilagsiy"; depends=[httr jsonlite]; }; eGST = derive2 { name="eGST"; version="1.0.0"; sha256="0qi4vg0pwy55js9ww1cw85ssim3x7s2p98cjijxvlrvid8sns5bq"; depends=[MASS matrixStats mvtnorm purrr]; }; eHOF = derive2 { name="eHOF"; version="1.9"; sha256="13m64vdbcr6ify7p6zj0dh5rsy87c9r7m4sslmgh0afbglszzrcs"; depends=[lattice mgcv]; }; + eList = derive2 { name="eList"; version="0.2.0"; sha256="1znmdksi2wzzjz0n6lrggs4ckvqq3qirdfvicxlfbm05zgnjq277"; depends=[]; }; eMLEloglin = derive2 { name="eMLEloglin"; version="1.0.1"; sha256="087zw48lykls2jcsmpqd5jkrlpr0j423snp00liszjhdpdh59saq"; depends=[lpSolveAPI]; }; eNchange = derive2 { name="eNchange"; version="1.0"; sha256="07vdi05fr6mynb86haas21izdcjiagw14p1h8n0qr1hb3klvs8n5"; depends=[ACDm doParallel foreach hawkes iterators Rcpp]; }; ePCR = derive2 { name="ePCR"; version="0.9.9-11"; sha256="0bkvjvygdnzcc23sslgkcrx11mzwgsqss37lwnbr7rq0jp1sw46s"; depends=[Bolstad2 glmnet hamlet impute pracma survival timeROC]; }; eRTG3D = derive2 { name="eRTG3D"; version="0.6.3"; sha256="1fa2wcipjym3vz53zxb6dz2i52b963yxrq5h1k7wydpj53xwk5jm"; depends=[CircStats ggplot2 pbapply plotly raster rasterVis tiff]; }; - eRm = derive2 { name="eRm"; version="1.0-1"; sha256="0njqzznnhnkvalmhiq5yq1w7gwp2myki5cv61w42ydvd27hdyyg9"; depends=[colorspace lattice MASS Matrix psych]; }; - eSDM = derive2 { name="eSDM"; version="0.3.5"; sha256="1x0w47jmcdqx4i8vm3pbmqjilzbgjp0qvp2qx2k7plczwb824shb"; depends=[dplyr magrittr purrr rlang ROCR sf shiny units]; }; + eRm = derive2 { name="eRm"; version="1.0-2"; sha256="0smym010kswc5vx90qr3x1vl16xj1x1i54rvrj006dc4agc1vmlk"; depends=[colorspace lattice MASS Matrix psych]; }; + eSDM = derive2 { name="eSDM"; version="0.3.7"; sha256="0rv5hhjsdkq0837822d52xfvfbj9qx1kjmqj8wyny335gv631205"; depends=[dplyr magrittr purrr rlang ROCR sf shiny units]; }; eadrm = derive2 { name="eadrm"; version="0.1.3"; sha256="0bb9glwqkzr1px03l4dxvgzm7zkrp3349l5fwfmw6jp0fxdl98ij"; depends=[]; }; - eaf = derive2 { name="eaf"; version="1.9-1"; sha256="0h7nilqa11s4casalilmk4ssgcl1lqn1w4033zxgc20y7f9rxhsg"; depends=[modeltools]; }; + eaf = derive2 { name="eaf"; version="2.0"; sha256="0q8jjq2clp053zvja94ws635f0n6h5dlbdppzl4lj6dgc3vnvxsz"; depends=[modeltools Rdpack]; }; earlyR = derive2 { name="earlyR"; version="0.0.5"; sha256="0978vv48sj1hs61rdb3xv02s8qz03jcm1c8q1mbb3d033x1q7k22"; depends=[distcrete EpiEstim epitrix ggplot2]; }; earlygating = derive2 { name="earlygating"; version="1.0"; sha256="0y6xjkh9p8bvanc9p5sycah8v81k85xr8i7vyvjb9g4a64srwhd7"; depends=[betareg doParallel foreach]; }; earlywarnings = derive2 { name="earlywarnings"; version="1.0.59"; sha256="06j5g5lrzl4p5pb1pp79h00iqpbwralzhpzxmaiymv7j8kz87nr0"; depends=[fields ggplot2 Kendall KernSmooth lmtest moments nortest quadprog som spam tgp tseries]; }; @@ -7748,62 +8049,66 @@ in with self; { easySVG = derive2 { name="easySVG"; version="0.1.0"; sha256="03gl5gl0yqgpygd4kna79wrhflbnq3zrz3iq2i8hk9xqd83mszh3"; depends=[]; }; easySdcTable = derive2 { name="easySdcTable"; version="0.6.0"; sha256="0wkg0g9qn5rwmm66p2ba1sk9mclymm4p72239cs8yxsdakrwpw1m"; depends=[sdcTable shiny SSBtools]; }; easyVerification = derive2 { name="easyVerification"; version="0.4.4"; sha256="08mih1arx01vj7cs1jsln644pcvslpyw1rgr6jmv2czr6xd8qb7d"; depends=[pbapply Rcpp SpecsVerification]; }; - easyalluvial = derive2 { name="easyalluvial"; version="0.2.3"; sha256="0026vqmbi54hyyv22r9nib5a5rnhlxxqjpk7ajmx1fvnjx8mydzm"; depends=[caret dplyr e1071 forcats ggalluvial ggplot2 ggridges gridExtra magrittr progress purrr randomForest RColorBrewer recipes rlang stringr tibble tidyr]; }; + easyalluvial = derive2 { name="easyalluvial"; version="0.3.0"; sha256="02l0jy3bwp3qrz6g5iknl2fsfqi6a6wzn8q18k8518xczlsn1gbd"; depends=[dplyr forcats ggalluvial ggplot2 ggridges gridExtra magrittr progress progressr purrr randomForest RColorBrewer recipes rlang stringr tibble tidyr]; }; easyanova = derive2 { name="easyanova"; version="7.0"; sha256="1zpwh3r1r0n11hgqzph8f2aac44qb6rpnhk73hcblq0f9vs0an55"; depends=[nlme]; }; easycsv = derive2 { name="easycsv"; version="1.0.8"; sha256="1i2k5372b6a5pypk6m0rsvvkcy0y51pvh57a60rpgqk8q0yq8pig"; depends=[data_table]; }; easynls = derive2 { name="easynls"; version="5.0"; sha256="1ma2q4y5dxk6q99v880vqfsgy1fha96j7pi8ch699l0pi6bx0d6c"; depends=[]; }; easypackages = derive2 { name="easypackages"; version="0.1.0"; sha256="00paxdwz4bw3imqhcsw6hj1h0gmnpishlxcj79n826vhdy23jc4y"; depends=[assertthat devtools]; }; easypower = derive2 { name="easypower"; version="1.0.1"; sha256="1vf0zv55yf96wjxja6ifdjvgc9nw0jl0hnc1ygyjd8pmwbgdz9bl"; depends=[pwr]; }; - easyr = derive2 { name="easyr"; version="0.5-2"; sha256="0payiz7ai6wf5pr0v983bnm7fmnjxcj1r4dhw3bnh6ic43kdd386"; depends=[data_table digest dplyr foreign glue Hmisc lubridate openssl readxl rlang rprojroot stringr XML]; }; + easyr = derive2 { name="easyr"; version="0.5-3"; sha256="19370zmw58alapxgp7cc5an9qh65m990jzr0x2j40cayy2w2xmkk"; depends=[data_table digest dplyr foreign glue Hmisc lubridate openssl readxl rlang rprojroot stringr XML]; }; easyreg = derive2 { name="easyreg"; version="4.0"; sha256="1w4wlhziyhdyldm0zgnm73fnxrh0fv8hwcw5j8ircxb4npx7bcgg"; depends=[nlme]; }; - eatATA = derive2 { name="eatATA"; version="0.9.1"; sha256="0p94wg3y466mna6aqsgljv2rm7gix3zx4jpb1z8jw5zfy2r0xn1y"; depends=[lpSolve Matrix Rglpk]; }; + eat = derive2 { name="eat"; version="0.1.0"; sha256="0rm5fq24gara9lplpxz1g1xawxm9qvz4bpipqi21p0s6g5617s8a"; depends=[conflicted dplyr ggparty ggplot2 ggrepel knitr lpSolveAPI partykit Rdpack reshape2]; }; + eatATA = derive2 { name="eatATA"; version="0.11.2"; sha256="0y5dj9b7zv136lmp0pxlqgia0nav0xhpdlyk8ix7r0bkywhd70zq"; depends=[lpSolve Matrix Rglpk]; }; eatDB = derive2 { name="eatDB"; version="0.4.1"; sha256="1p0dfdfa8409mdpr10ifj9vwskrypda9k02f7j6axcdnsfff6nha"; depends=[DBI RSQLite]; }; - eatGADS = derive2 { name="eatGADS"; version="0.15.2"; sha256="163wq5dsj6w3ax3fhz8y267vk77i8dknbsg9l08mw4dlh7bdyrm2"; depends=[data_table eatDB eatTools haven hms plyr tibble]; }; - eatTools = derive2 { name="eatTools"; version="0.3.8"; sha256="044pd0h8fvah2g8kdvja5c2j9qxw7r0203k2n80yfafc84k6k1ix"; depends=[data_table]; }; + eatGADS = derive2 { name="eatGADS"; version="0.16.0"; sha256="1w1l4raqy4ml5p40y24ji766z0dqam4jy5fhs43nflp6zgjzl3qn"; depends=[data_table eatDB eatTools haven hms plyr tibble]; }; + eatRep = derive2 { name="eatRep"; version="0.13.5"; sha256="183amgw1dzw4py091f7xwif9vh0ps0kpgvhkanadyx0pdga0ij30"; depends=[BIFIEsurvey boot car combinat eatGADS eatTools EffectLiteR estimatr fmsb Hmisc janitor lavaan lme4 mice miceadds msm plyr progress reshape2 survey tidyr]; }; + eatTools = derive2 { name="eatTools"; version="0.5.0"; sha256="0ks9prakgkc1jddiy5ck4k6633jr2ck9xdz98jpc29svscvzw6pb"; depends=[data_table]; }; ebGenotyping = derive2 { name="ebGenotyping"; version="2.0.1"; sha256="1jllzc7kvvckrws8qhgvwy626llyb68sp1davp7swx48sf7rwcxc"; depends=[]; }; ebSNP = derive2 { name="ebSNP"; version="1.0"; sha256="0x3ijwg4yycsfy6jch1zvakzfvdgpiq8i7sqdp5assb8z1823w0b"; depends=[]; }; eba = derive2 { name="eba"; version="1.10-0"; sha256="03jr54xq109x9bf8kcs8mi7am17l9ya3xdkdppd8imwd2paqrssk"; depends=[nlme psychotools]; }; ebal = derive2 { name="ebal"; version="0.1-6"; sha256="1cpinmbrgxxv0fzi9qi2inv4hw2lz7iq4b0ggp316rdqqb5bj9r0"; depends=[]; }; ebdbNet = derive2 { name="ebdbNet"; version="1.2.5"; sha256="0kal4sqx12y04696ilwnwkmss4rn16dkbnalgqimz6i4jhz8n23h"; depends=[igraph]; }; - ebirdst = derive2 { name="ebirdst"; version="0.2.1"; sha256="1cmi0hdh6363hcbqwglald3bn22rlvl4yqg4l3by6005mirjgx2i"; depends=[car data_table dplyr ggplot2 gridExtra magrittr mgcv PresenceAbsence rappdirs raster rgdal rlang scales sf stringr tidyr viridisLite xml2]; }; - ebmc = derive2 { name="ebmc"; version="1.0.0"; sha256="0v9hkzy8ljddmi6wdjd1jga4ib566ikr1vgrvxba67ka524r6bbp"; depends=[C50 DMwR e1071 pROC randomForest rpart]; }; - ebmstate = derive2 { name="ebmstate"; version="0.1.1"; sha256="02vg0iha3sr5wil3ngpyrm084mz7xrm11h7y9blwd3p2fbzm9rpv"; depends=[HDInterval mstate Rcpp survival]; }; + ebirdst = derive2 { name="ebirdst"; version="0.2.2"; sha256="1bgh7vhwl6jcybaa05j6gdh4z17r17n500wx1za1q5lfww6v6mny"; depends=[car data_table dplyr ggplot2 gridExtra magrittr PresenceAbsence rappdirs raster rlang sf stringr tidyr viridisLite xml2]; }; + ebmstate = derive2 { name="ebmstate"; version="0.1.2"; sha256="0x7mklp8209xi0lglh9ggjm7crvvx83arryap319lwjll2d8p89s"; depends=[HDInterval mstate Rcpp survival]; }; ebreg = derive2 { name="ebreg"; version="0.1.2"; sha256="1azs6dh2c7qacmql9kyssxp3gdk7i3fyaq9k8jnagzlmmkzmxddf"; depends=[lars Rdpack]; }; ec50estimator = derive2 { name="ec50estimator"; version="0.1.0"; sha256="1zg4p1734q2jzifzfi2lf9wz3687s3cdn0yzkiwbc6w49mgdw877"; depends=[dplyr drc magrittr tibble tidyr]; }; ecap = derive2 { name="ecap"; version="0.1.2"; sha256="0d260y4phh1a7zlj2lgvdf7xd2z14l9djv7nrwa84pwqqyijc7rl"; depends=[ggplot2 quadprog]; }; - ecb = derive2 { name="ecb"; version="0.2"; sha256="17hj4d48j6rran64ajzlgkgz17mab51fa3lz8rm3mw0qhahkjlmc"; depends=[curl httr rsdmx xml2]; }; + ecb = derive2 { name="ecb"; version="0.4.0"; sha256="0hn1d1hxilwxxmxzzpdcj81d4vy8fbjk1z09kw7j0b2p04wrdlkc"; depends=[curl httr rsdmx xml2]; }; ecce = derive2 { name="ecce"; version="1.0.7"; sha256="03p64l9krnpzdgqyj1fygqq36llsv4jc4bal1qvvgaf652w8fqwy"; depends=[RCurl rjson stringr]; }; ecd = derive2 { name="ecd"; version="0.9.1"; sha256="0d8mf5q6n7k5qj6kxvrb3habl0qmn2rxv814kydkrz2bg0scvm1q"; depends=[digest ggplot2 gridExtra gsl moments optimx polynom RcppFaddeeva Rmpfr RSQLite stabledist xtable xts yaml zoo]; }; ecdfHT = derive2 { name="ecdfHT"; version="0.1.1"; sha256="1n3n9n86pj8c54l3xvp7knvi0ajbnjmz9pi79p7wfq92a90fqx48"; depends=[rgl]; }; - ecespa = derive2 { name="ecespa"; version="1.1-12"; sha256="09af1331y147lrfn1zks7lv93vfwfzc1r7zy82336jqx2idh6hvb"; depends=[spatstat]; }; - echarts4r = derive2 { name="echarts4r"; version="0.3.3"; sha256="0k12j804a4qv0my7dvypi5s9nr249cpfl6arfbaz7a6rbpxb8zam"; depends=[broom corrplot countrycode dplyr htmltools htmlwidgets jsonlite magrittr purrr rstudioapi scales shiny]; }; + ecespa = derive2 { name="ecespa"; version="1.1-13"; sha256="0a8s923xzw6wkl9240mqsr7lpvjmi20kqn2zsbax3rrrdf4gqfkx"; depends=[spatstat spatstat_core spatstat_geom]; }; + ech = derive2 { name="ech"; version="0.1.1.2"; sha256="1mw68dkm6n6zj27rmyw33gaha1nly1srr6v1d5iib72b1gwnik8l"; depends=[assertthat curl dplyr fs geouy glue haven janitor labelled laeken purrr readxl rlang srvyr statar stringr survey tidyr]; }; + echarts4r = derive2 { name="echarts4r"; version="0.4.0"; sha256="0v93q0r5l5vzwfylq5n0wkzjaqgm5xiyw13rcrlvkbcx5zwjsgcb"; depends=[broom corrplot countrycode dplyr htmltools htmlwidgets jsonlite magrittr purrr rstudioapi scales shiny]; }; + echarty = derive2 { name="echarty"; version="0.1.3"; sha256="0imc7s0mdwf5sjqszq5fk2jqbrv7nypqd740f3d7y7qsp8hdbhcx"; depends=[crosstalk dplyr htmltools htmlwidgets jsonlite magrittr purrr shiny]; }; echelon = derive2 { name="echelon"; version="0.1.0"; sha256="0dw15igx8jwgfr1f7p5pspxjiqhqmfp7shdhq8g07f4bj76irzm4"; depends=[]; }; echo_find = derive2 { name="echo.find"; version="4.0.1"; sha256="1nadqqpxgx2ck16nzjp5ajm6714452qzllg5cq1jpisv1yb31db2"; depends=[boot minpack_lm]; }; echogram = derive2 { name="echogram"; version="0.1.2"; sha256="0kir7x32fk3fc63kr3b2j0hfkmivs2pwrlxyjvdg7xqc59hjp3ma"; depends=[geosphere readHAC]; }; echor = derive2 { name="echor"; version="0.1.5"; sha256="0knvvrpw5icyb02jrj8jhlj8ql1j145gxg6wagb458j7kjchqnan"; depends=[dplyr geojsonsf httr plyr purrr readr rlang tibble tidyr]; }; ecipex = derive2 { name="ecipex"; version="1.1"; sha256="16iyi6n0pnyfmy47b0ranjbh3spvq8cgkmcamzhgjfj7qn0ix184"; depends=[CHNOSZ]; }; eclust = derive2 { name="eclust"; version="0.1.0"; sha256="01x327w02m357lngmgv3drni2s67sass25xk9vni1z434n8i4428"; depends=[caret data_table dynamicTreeCut magrittr pacman pander stringr WGCNA]; }; - ecm = derive2 { name="ecm"; version="5.0.0"; sha256="0vf6wcw0flqhngn712qf9ahaprizzv46af5qlrixqwgwn4q4kp9m"; depends=[car]; }; + ecm = derive2 { name="ecm"; version="6.1.0"; sha256="1ngz92ysi5vdm7wh9ahzd4b5rhs84pb92figd75v5ywfy2ya6jbb"; depends=[car earth lmtest sandwich urca]; }; ecmwfr = derive2 { name="ecmwfr"; version="1.3.0"; sha256="0xwbcgd590vk4civa4s039avvvxsazzh9y05lw591mpm79lz19mj"; depends=[curl getPass httr keyring memoise]; }; ecoCopula = derive2 { name="ecoCopula"; version="1.0.1"; sha256="18gkib3m4p7vi9jgzyrnznl9kcjizlh77icqrv8xjpi40ksw9m2r"; depends=[betareg doParallel foreach glasso glm2 igraph MASS mgcv mvabund ordinal plyr sna tweedie]; }; ecochange = derive2 { name="ecochange"; version="1.3"; sha256="16dpp887nv7afpvcgmpli0iv4jaz060vj0w63asfz04ix95jmcnl"; depends=[curl dplyr forcats gdalUtils getPass ggplot2 httr landscapemetrics lattice R_utils raster rasterVis readr rgdal rgeos rlang rvest sf sp tibble viridis xml2]; }; ecodist = derive2 { name="ecodist"; version="2.0.7"; sha256="1dkf2m6glry5wzwfjiyw6sac89v6g0frbagr9cyfp2hcp0y5g4n2"; depends=[]; }; ecolMod = derive2 { name="ecolMod"; version="1.2.6"; sha256="1n30faldfhpm2jkaw793vr220kgn3bmn8hxhw32rax294krmwn4v"; depends=[deSolve diagram rootSolve shape]; }; + ecolTest = derive2 { name="ecolTest"; version="0.0.1"; sha256="0gkhf8gdjvkys54x0qx0h5i0lz0ksba6xdy15wzblzhym43vh9wf"; depends=[]; }; ecolottery = derive2 { name="ecolottery"; version="1.0.0"; sha256="0w5aq1aaqzz74vlj8hgnmn60l8rdrchx022dpspqnpvpzdlh65z5"; depends=[abc ggplot2]; }; - econet = derive2 { name="econet"; version="0.1.92"; sha256="1csnsl9n5wvij9ach13m40cd92y60algj10fsljla6z3pv9vg0cg"; depends=[bbmle doParallel dplyr foreach igraph intergraph MASS Matrix minpack_lm plyr progressr sna spatstat_utils]; }; - econetwork = derive2 { name="econetwork"; version="0.4.1"; sha256="15x5x75y30zyk2k4bjbn44diwvxkl8j5dnzg6ln6czvzd1hy191w"; depends=[bipartite blockmodels igraph Matrix_utils rdiversity]; }; + econet = derive2 { name="econet"; version="0.1.93"; sha256="1irabvbmi5lr7h1plfyq9wpdp0vsdbbgvglx4hk6jzrmk6ll9jjd"; depends=[bbmle doParallel dplyr foreach formula_tools igraph intergraph MASS Matrix minpack_lm plyr progressr sna spatstat_utils]; }; + econetwork = derive2 { name="econetwork"; version="0.5.1"; sha256="1q092y2bq410ln98vwgmy6s09zpyj1pj35wz8i1y1by7kc9k775q"; depends=[bipartite blockmodels igraph Matrix_utils Rcpp RcppEigen RcppGSL rdiversity]; }; economiccomplexity = derive2 { name="economiccomplexity"; version="1.1"; sha256="0ms5jr3d0hgch4di26wcaxrbl7q6iq2k53m2xwk0lxv6s1p373mp"; depends=[igraph Matrix Rdpack]; }; ecoreg = derive2 { name="ecoreg"; version="0.2.3"; sha256="1bhh4bnvrvgz49wim5r0b4awfsn9l23wvl4kl0vny0s4hm7cgahc"; depends=[]; }; ecorest = derive2 { name="ecorest"; version="1.0.0"; sha256="13x95z99yqld1fvfgzbm6ahrnvfvcqwlb23yjr187yg83iynh79v"; depends=[viridis]; }; - ecoseries = derive2 { name="ecoseries"; version="0.1.5"; sha256="1q35hp5hl6z28hns5rnp3mjn6hqp5qh714pagw7fw4d4a6wnvacy"; depends=[magrittr RCurl readr rjson rvest tibble xml2 zoo]; }; - ecosim = derive2 { name="ecosim"; version="1.3-1"; sha256="0gpgjswqmibnz9lpcidvw3y1wmd38l4lyha4fbs0agiz6yyfiyjn"; depends=[deSolve stoichcalc]; }; + ecosim = derive2 { name="ecosim"; version="1.3-2"; sha256="1ivfd8c1gh685gqy22cxi42vh54r6zya27jihpb9na7mfrc0nwqn"; depends=[deSolve stoichcalc]; }; ecospace = derive2 { name="ecospace"; version="1.4.2"; sha256="0vfaf27bv687ypxg5apzv63rl495rxyflqw33j17i4h0s7cjkgrm"; depends=[FD]; }; - ecospat = derive2 { name="ecospat"; version="3.1"; sha256="17mxny0m0pl0b4vn7slc2qqabjp3i91nz0yjwfvrd827s2hhcra9"; depends=[ade4 adehabitatHR adehabitatMA ape biomod2 classInt dismo doParallel ecodist foreach gbm gtools iterators maps maptools matrixStats poibin PresenceAbsence randomForest raster rms snowfall sp spatstat vegan]; }; + ecospat = derive2 { name="ecospat"; version="3.2"; sha256="1w937f56q8lgjyqc575vxy3vfhd53ri9yiw300qqx6mnj66ijsl8"; depends=[ade4 adehabitatHR adehabitatMA ape biomod2 classInt dismo doParallel ecodist foreach gbm gtools iterators ks maps maptools matrixStats nabor poibin PresenceAbsence randomForest raster rms snowfall sp vegan]; }; ecostats = derive2 { name="ecostats"; version="0.1.4"; sha256="0xkhkcc6psgvvwhys9azhxisnqw0azd7brp0rg60d725jqvwhbyp"; depends=[GET mgcv mvtnorm]; }; ecotox = derive2 { name="ecotox"; version="1.4.2"; sha256="0i4wjarg8gj4hfr0d4fqk74ymhkzrq3vkklpv5v1511ci19hpv16"; depends=[tibble]; }; ecotoxicology = derive2 { name="ecotoxicology"; version="1.0.1"; sha256="084xkr59d7x9zxmsnsyym2x8jshz6ag6rvnmhd1i6fzar8ypwccb"; depends=[]; }; ecoval = derive2 { name="ecoval"; version="1.2.7"; sha256="1hnryk9y3074iy7hv40jr00lpg2w99l7halwv6bj14v6ygddj2k7"; depends=[jpeg rivernet utility]; }; ecp = derive2 { name="ecp"; version="3.1.3"; sha256="0n602jssl6rf596nwm6hbl7s9vdlqi20w8mrhxicj373mw5v22m8"; depends=[Rcpp]; }; + ecpc = derive2 { name="ecpc"; version="2.0"; sha256="0xw9yd2xsxkia68zvm2pkqm73y3k9gzhnkslwikq39ra1l404r28"; depends=[CVXR gglasso glmnet Matrix multiridge mvtnorm pROC survival]; }; ecr = derive2 { name="ecr"; version="2.1.0"; sha256="0vvkdxlcqaim9mkgwgdxrx1xhw3lshi1nxfw3kqllq14p3l6xss4"; depends=[BBmisc checkmate ggplot2 parallelMap ParamHelpers reshape2 smoof]; }; ectotemp = derive2 { name="ectotemp"; version="0.2.0"; sha256="172rij0mmk7dd10lpbsxm4yy7072nz1fh7jfiyqmagzs5hwa31jv"; depends=[dplyr psych]; }; ed50 = derive2 { name="ed50"; version="0.1.1"; sha256="058p1750ba5hp4rczi26grgwjia2ny1880v1vfp6wxad13r459pq"; depends=[boot]; }; @@ -7821,49 +8126,51 @@ in with self; { edfReader = derive2 { name="edfReader"; version="1.2.1"; sha256="076far4fhd6rpa6fwffad4cgchjvar135yblvlrm33s9pd5bf0hn"; depends=[]; }; edfun = derive2 { name="edfun"; version="0.2.0"; sha256="1wxx6bgy03z7c1d6556bbjl1cb49n2vn734fw2d5c1jk0zsh3fmz"; depends=[]; }; edgar = derive2 { name="edgar"; version="2.0.3"; sha256="129q32bnpcx0l2ffnids87692hc7nbg4hw3r117aamp835i12gri"; depends=[qdapRegex R_utils stringi stringr tm XML]; }; - edgarWebR = derive2 { name="edgarWebR"; version="1.0.3"; sha256="00whhcb57b23id2gsvfijschjdwvk0fjhh8pv4jhgfiadsjljkfx"; depends=[httr xml2]; }; + edgarWebR = derive2 { name="edgarWebR"; version="1.1.0"; sha256="1v9rdj2qdcvzz7g78pa9j6l8d6zjz1q06h09c4547r67bzfz1nxy"; depends=[httr jsonlite xml2]; }; edgeCorr = derive2 { name="edgeCorr"; version="1.0"; sha256="19n67yc58ksin7xydrnfsyyw7fqawm5xli67cz4lv4wb62w6r6ld"; depends=[]; }; edgeRun = derive2 { name="edgeRun"; version="1.0.9"; sha256="0d5nc8fwlm61dbi00dwszj1zqlij4gfds3w1mpcqnnfilr2g3di1"; depends=[data_table edgeR]; }; edgebundleR = derive2 { name="edgebundleR"; version="0.1.4"; sha256="0pajr95qqppk2m4l7rfi46rll32z8a7lmq0vmb3p8n0aks5ajn1n"; depends=[htmlwidgets igraph rjson shiny]; }; - edgedata = derive2 { name="edgedata"; version="0.1.0"; sha256="0fx8s2gq9haj66r2zm9hmq0g93g8xgkraakpdpzd8n37pp0ivv7f"; depends=[]; }; + edgedata = derive2 { name="edgedata"; version="0.2.0"; sha256="11sc7x0m00yhn2c4601dpjv3brmf57i8barsl3p7bawcvka8z5lr"; depends=[]; }; edina = derive2 { name="edina"; version="0.1.1"; sha256="1lpmidyxi54byrsnwwadkh5rr454635xrwa4v2wz8mqr2hngxis3"; depends=[ggplot2 jjb Rcpp RcppArmadillo reshape2 rgen]; }; - editData = derive2 { name="editData"; version="0.1.2"; sha256="1ibpd2rlm6i9izyizmdhzxv8agrw920hxbin5y79cmf78rdg1sxy"; depends=[DT miniUI rstudioapi shiny tibble]; }; + editData = derive2 { name="editData"; version="0.1.8"; sha256="170i8p264zj716h58bb6pvgh2lnz1w5vplnrcv8vizppi0n1js6l"; depends=[dplyr DT magrittr miniUI openxlsx rio rstudioapi shiny shinyWidgets tibble]; }; editrules = derive2 { name="editrules"; version="2.9.3"; sha256="07j8wj0fk34irqgsz70h2wad3wdjv5xl1cl702vxbr0nvmpw2ngl"; depends=[igraph lpSolveAPI]; }; - edmdata = derive2 { name="edmdata"; version="1.0.0"; sha256="1kvwlhkk7cqyqdai9mxypnv09cgz6g7s7dhmp38achgppl1z0a9j"; depends=[]; }; + edl = derive2 { name="edl"; version="1.0"; sha256="0hl12y6pjdwvx7rxmxz1p07ggmh20q9n8c9vkd6fhy7panlvw6rn"; depends=[data_table plotfunctions]; }; + edmdata = derive2 { name="edmdata"; version="1.1.0"; sha256="10ik5q2jw86b8fcskid5qpn7anfvfbrksh01rvb66mrds87lv7wl"; depends=[]; }; edrGraphicalTools = derive2 { name="edrGraphicalTools"; version="2.2"; sha256="105jv2sz10xbl881lkhgmxzgmb8629mqsminhd197khrkf9nv40i"; depends=[lasso2 MASS mvtnorm rgl]; }; edstan = derive2 { name="edstan"; version="1.0.6"; sha256="1gm1rxwywigyfdlcm2yj1m9qjb4s6w7chr1ck7b32x1pdxdl3ns5"; depends=[ggplot2 rstan]; }; educineq = derive2 { name="educineq"; version="0.1.0"; sha256="0qd6kvcy280glv3q6lcrawmnsfvp90as95chgi3hav0yj2dpakn6"; depends=[flexsurv ineq]; }; edwards97 = derive2 { name="edwards97"; version="0.1.0"; sha256="1ybksvrp7pd78ncmzdn67q9w3baxx6kf886214cqa5yfbi8jsc4z"; depends=[broom cli glue rlang tibble withr]; }; - eechidna = derive2 { name="eechidna"; version="1.4.0"; sha256="07537brbdinkrmygbd2galyl6acbcbg2pkjafkdhxdgklpxv7j9m"; depends=[colourpicker dplyr ggplot2 ggthemes magrittr plotly purrr rgdal rgeos shiny sp stringi tibble tidyr tidyselect]; }; - eefAnalytics = derive2 { name="eefAnalytics"; version="1.0.8"; sha256="14wxba97nd64xh6lnpdbap3zcrj5iblrqc75izblcvl4sligc0sx"; depends=[lme4 metafor mvtnorm rstanarm]; }; + eechidna = derive2 { name="eechidna"; version="1.4.1"; sha256="1p8vj371i7zglw7898akzj4hd5j7zk35is91jylxalldjab88v9c"; depends=[colourpicker dplyr ggplot2 ggthemes magrittr plotly purrr rgdal rgeos shiny sp stringi tibble tidyr tidyselect]; }; + eefAnalytics = derive2 { name="eefAnalytics"; version="1.0.11"; sha256="1k8ff6jbid1rlwzszwr4q01gb11bh7k06n3kfvxy9bpa0jrhb4nj"; depends=[ggplot2 lme4 mvtnorm rstanarm]; }; eegkit = derive2 { name="eegkit"; version="1.0-4"; sha256="1r1lack4ps9hwqq56rq37431rcxf3x79zgvda6vrmh4s0ziy6v4x"; depends=[bigsplines eegkitdata ica rgl signal]; }; eegkitdata = derive2 { name="eegkitdata"; version="1.0"; sha256="1krsadhamv1m8im8sa1yfl7injvrc4vv3p88ps1mpn8hibk5g51m"; depends=[]; }; eel = derive2 { name="eel"; version="1.1"; sha256="0cv6dhw57yy140g73z94g9x1s42fpyfliv9cm2z1alm7xwap1l0x"; depends=[emplik rootSolve]; }; eemR = derive2 { name="eemR"; version="1.0.1"; sha256="1w3nwlrbxm7z4c3acx991zk5drgs67qys7kgl0qakh5vrdsrxw3v"; depends=[assertthat dplyr pracma purrr R_matlab rlist stringr viridis]; }; + eemdTDNN = derive2 { name="eemdTDNN"; version="0.1.0"; sha256="1i2xyc26644pgr45s78g44mzln3km9r5cw22niz3cd6q8ik2iva0"; depends=[forecast Rlibeemd]; }; eeptools = derive2 { name="eeptools"; version="1.2.4"; sha256="048gz26dqgfsnxhp4r99j7p4s4d5pxsjci5zw8wjvv35lizij573"; depends=[arm data_table ggplot2 maptools vcd]; }; eesim = derive2 { name="eesim"; version="0.1.0"; sha256="0ljj1jp9cl0im8k7sfjd28ggj4q9a14df3554kwxkssr1vsn1wbc"; depends=[dplyr lubridate purrr viridis]; }; ef = derive2 { name="ef"; version="1.2.0"; sha256="1ic26mwjv221yyjj16v9xcdxsg3pl6wsp82iaprihdcndswccvzi"; depends=[dplyr Matrix mgcv RcppEigen TMB]; }; - effectFusion = derive2 { name="effectFusion"; version="1.1.2"; sha256="0m392wrkmgvys7a2bk2w1swfkjikkllng8sy8wb8s2j9y6c3wanp"; depends=[bayesm cluster ggplot2 GreedyEPL gridExtra MASS Matrix mcclust]; }; effectR = derive2 { name="effectR"; version="1.0.2"; sha256="1icr1sx98x3h8rbky1agdh809arhjqcypyajl7y50yis8a5pkycb"; depends=[ggplot2 reshape2 rmarkdown seqinr shiny viridis]; }; effects = derive2 { name="effects"; version="4.2-0"; sha256="0iks79rd4knrd81x4kvcpgpclr69l0m0v6sfla8k3wzkcnydycv8"; depends=[carData colorspace estimability insight lattice lme4 nnet survey]; }; - effectsize = derive2 { name="effectsize"; version="0.4.1"; sha256="1rbl63b1c7z9llznnwvclqrcgdd4hfmc7y66v7raqqf2a4nadqa5"; depends=[bayestestR insight parameters]; }; + effectsize = derive2 { name="effectsize"; version="0.4.4-1"; sha256="02rwf3lxnzgc8yh0wridsc6lqr9s6v0cqzbk4biwnr494rvs46zb"; depends=[bayestestR insight parameters]; }; effectsizescr = derive2 { name="effectsizescr"; version="0.1.0"; sha256="0shfjk6r3bz04jakrn5nwgymjx60lk83i0akcx7zqfxp3k8yncs5"; depends=[Kendall]; }; efflog = derive2 { name="efflog"; version="1.0"; sha256="1sfmq7xrr6psa6hwi05m44prjcpixnrl7la03k33n0bksj8r1w6b"; depends=[]; }; effsize = derive2 { name="effsize"; version="0.8.1"; sha256="1m5ch2g77f4ldbxhzp2ls1pga8hq7ggkz1xs8a90h0s09rj0gd7w"; depends=[]; }; + eflm = derive2 { name="eflm"; version="0.1"; sha256="1hx51xnsjqv4mfqfv46mcd669fy3sc029x70w9r180v7misqgwww"; depends=[vctrs zoo]; }; efreadr = derive2 { name="efreadr"; version="0.2.2"; sha256="1h27by1m451wrnw017005avs5yj3fjzrm2lq5153aqm1mbbxxwvs"; depends=[dplyr ensurer magrittr readr]; }; efts = derive2 { name="efts"; version="0.9-0"; sha256="1cdn37sij3q73z9gal6x3nnnds55whfj5ywyww119hx092xcb2h4"; depends=[lubridate magrittr ncdf4 plyr stringr udunits2 xts]; }; ega = derive2 { name="ega"; version="2.0.0"; sha256="04kwh24aap22yclmcrix3vi553qb30hd43mgfzpdl0cw3ibrh7xg"; depends=[ggplot2 mgcv]; }; egcm = derive2 { name="egcm"; version="1.0.12"; sha256="0nssf5six1j7z6fss7478zdbsfx60myzw833m7nsnaf1r8n4ixaf"; depends=[ggplot2 MASS pracma quantmod tseries urca xts zoo]; }; egg = derive2 { name="egg"; version="0.4.5"; sha256="1fy7srpiavfn8kyrr1m84an7acgwi6ydzrg71m3b0vk7y9ybmj0m"; depends=[ggplot2 gridExtra gtable]; }; eggCounts = derive2 { name="eggCounts"; version="2.3"; sha256="0y74dd8s406yz6nhwlb09hgarw90a68wji2vykxpqcrfll814g7q"; depends=[BH boot coda lattice numbers Rcpp RcppEigen rootSolve rstan StanHeaders]; }; - egor = derive2 { name="egor"; version="0.20.06"; sha256="1fpx5bf0cqkclk91d45hglr2bmksbf2sf5g3mc7l0n872z2xdhjp"; depends=[dplyr igraph network purrr rlang shiny srvyr tibble tidygraph tidyr]; }; - eha = derive2 { name="eha"; version="2.8.4"; sha256="03yg2pkypjksq6jh30ji4665j40r69d0bjff35kngy8kdfby5dr8"; depends=[survival]; }; + egor = derive2 { name="egor"; version="0.21.02"; sha256="18ygbc0zybd444skvhzf4vcc0zblz8jhbxmv2ik3m4cafhmy03gz"; depends=[dplyr purrr rlang srvyr tibble tidygraph tidyr]; }; + eha = derive2 { name="eha"; version="2.9.0"; sha256="069nxf7mfx2b2r1961jf0mcgxbc132ljykr17p3k8pax39m2p78n"; depends=[survival]; }; ehaGoF = derive2 { name="ehaGoF"; version="0.1.1"; sha256="15hpzj3ridl6w3pd5z86d88cc88jw09qpqhsdwkar4dby8lgxhi0"; depends=[]; }; ehelp = derive2 { name="ehelp"; version="1.2"; sha256="0264nx4bidrbwhlxx9llarvh4zb3xnzln8km14823q1hclkpm2fq"; depends=[]; }; ei = derive2 { name="ei"; version="1.3-3"; sha256="0i8pvpal23zwsqldhmm3iis4vw9s08mlydpshaig2dsd9549gn11"; depends=[cubature eiPack ellipse foreach MASS mnormt msm mvtnorm plotrix sp tmvtnorm ucminf]; }; eiCompare = derive2 { name="eiCompare"; version="3.0.0"; sha256="0cpllc4aq52mga2cc8ms1q4qf633r13i5j6267vnvqyb6zq0r47y"; depends=[bayestestR censusxy coda data_table doParallel dplyr ei eiPack foreach ggplot2 leaflet magrittr mcmcse overlapping purrr rlang sf stringr tidyr tidyselect wru]; }; eiPack = derive2 { name="eiPack"; version="0.2-1"; sha256="0xcgl9pr6d960zhp8fd944ba5p5ybp520lp2a4jgsj1lcvqf8xbn"; depends=[coda MASS msm]; }; - eia = derive2 { name="eia"; version="0.3.6"; sha256="1fyvm2j53m0mq53ld6kgr8nmf020vcp9jcafsbk7xaymgxncvmqr"; depends=[dplyr httr jsonlite lubridate magrittr memoise purrr readxl tibble]; }; + eia = derive2 { name="eia"; version="0.3.7"; sha256="1af9m5qrchxcrhyasx0hkrzjr6z4vixxmq4q9q33bkscy263q9fg"; depends=[dplyr httr jsonlite lubridate magrittr memoise purrr readxl tibble]; }; eicm = derive2 { name="eicm"; version="1.0.1"; sha256="0gil445xrsd1hhi5l6i3mn7kf4mbfwwhfkgmyja62dj68m4akwfz"; depends=[doSNOW foreach GA iterators optimParallel pso snow ucminf]; }; eigeninv = derive2 { name="eigeninv"; version="2011.8-1"; sha256="18dh29js824d7mrvmq3a33gl05fyldzvgi8mmmr477573iy9r30g"; depends=[]; }; eigenmodel = derive2 { name="eigenmodel"; version="1.11"; sha256="1l3n0z736xf3x6cyxzmmq1jb2glxi2b75z7v39y4471knh6nbb4d"; depends=[]; }; @@ -7871,12 +8178,15 @@ in with self; { eikosograms = derive2 { name="eikosograms"; version="0.1.1"; sha256="13s5wqcc8iwnhn3msrh9dfrvq9bwlby93p9v5wcnrm8m9iskax1s"; depends=[plyr]; }; eimpute = derive2 { name="eimpute"; version="0.1.1"; sha256="1ipm6v4irk4d4qxld09h8r0kknjmbikvn27y68wq7r02qhcvj4nv"; depends=[Rcpp RcppEigen]; }; einet = derive2 { name="einet"; version="0.1.0"; sha256="02v4k6031q2bcjkhbypzkgdj1lyvqbsi1nb0y40zb26bk2381ycq"; depends=[assertthat entropy igraph magrittr shiny]; }; - eirm = derive2 { name="eirm"; version="0.2.0"; sha256="1cd5ig79lr3zwydf89bhpqj86b757z74m3w7ca2yw7n6zhxy8qy5"; depends=[lme4 optimx reshape2]; }; + eiopaR = derive2 { name="eiopaR"; version="0.1.0"; sha256="0vyidwmvva7sr1vwxdgq3lsq7lrwpxxh23yiqpg5w5l31nj8151j"; depends=[httr jsonlite]; }; + eirm = derive2 { name="eirm"; version="0.3"; sha256="02x2cl8zrngj8ram4m8s501jbpa6120r2b3kwzswp3i82lrdr46m"; depends=[lme4 magrittr optimx readxl reshape2 shiny shinycssloaders shinydashboard]; }; eive = derive2 { name="eive"; version="2.3"; sha256="073hwx944db7zxq6yib6yvciaic11k49zl1iqphippcd5ygkad80"; depends=[Rcpp]; }; eivtools = derive2 { name="eivtools"; version="0.1-8"; sha256="0ynmrql6dv10m7cwba5mzwlbvp6ab53nzqqvk3ihwyiqzmnnmpk4"; depends=[R2jags]; }; eixport = derive2 { name="eixport"; version="0.5.0"; sha256="1k5p9v5jmw5cs31sn69fjdfhh5yyzk85828aljsmsyx1ycibnwmg"; depends=[cptcity data_table ncdf4 raster sf sp]; }; + elaborator = derive2 { name="elaborator"; version="1.1"; sha256="1kq3qqqywpzrk1ichsljvfijhsybmj7s0scmswmwi2crqi67gzp8"; depends=[bsplus dendextend dplyr forcats haven purrr RColorBrewer reshape2 rlang seriation shape shiny shinydashboard shinyWidgets tidyr]; }; + elasdics = derive2 { name="elasdics"; version="0.1.2"; sha256="0w0b38v2haqn5a7qf1zdn7ypqgp8al7qzmaxmycl184v48w7bk5z"; depends=[numDeriv]; }; elasso = derive2 { name="elasso"; version="1.1"; sha256="0nz3vw803dvk4s45zc9swyrkjwna94z84dn4vfj3j17h74a0cij2"; depends=[glmnet SiZer]; }; - elastic = derive2 { name="elastic"; version="1.1.0"; sha256="1xg8gqa0maasx85fbff4vid2r8s0fgzj4iswyayybzik99zb26ly"; depends=[crul curl jsonlite R6]; }; + elastic = derive2 { name="elastic"; version="1.2.0"; sha256="0k98ziacyxl1pyhyynmswcncqwl0a05sawypncdpdd9xr77nvgi6"; depends=[crul curl jsonlite R6]; }; elasticIsing = derive2 { name="elasticIsing"; version="0.2"; sha256="1zjgvz7w5j06x2cd1fzjl85di95ah67m1lanw01kic2bvhfwfbn6"; depends=[cvTools glmnet magrittr qgraph reshape2]; }; elasticnet = derive2 { name="elasticnet"; version="1.3"; sha256="0nxcw06d0cp2mbqzg2fm9yys5xm6xx7bfcfvr0avcs8afkvz29j8"; depends=[lars]; }; elasticsearchr = derive2 { name="elasticsearchr"; version="0.3.1"; sha256="0v79kb0w33n7l64ipkq0bd7kp5hmj6cvxf5rflqjd412lnf669q8"; depends=[dplyr httr jsonlite]; }; @@ -7884,49 +8194,50 @@ in with self; { elec_strat = derive2 { name="elec.strat"; version="0.1.1"; sha256="09196k5c3jsikh98d33bn70izwcbx0wb5ki9fv1ij0dw9mnv4c3p"; depends=[elec]; }; elect = derive2 { name="elect"; version="1.2"; sha256="1hjqhmdklspssa75x8xdhv2narqgw80qh259hyfwfgnvva97w2ja"; depends=[msm nnet]; }; elections = derive2 { name="elections"; version="1.0"; sha256="0ig3pd1dw978g2sg4ynzd3p15nk6hx17pxvbxfi5rm131mjdmjdm"; depends=[]; }; - electionsBR = derive2 { name="electionsBR"; version="0.3.1"; sha256="0yxaxd84d13mb6xbixgm9rd56alrh5qnrmh54n1h94mna89jb103"; depends=[data_table dplyr haven magrittr readr]; }; + electionsBR = derive2 { name="electionsBR"; version="0.3.2"; sha256="05wxzfgh0f3n6w8ah32q2v4f67g6w4qri4dv1linmlax77clv9fn"; depends=[data_table dplyr haven magrittr readr]; }; electivity = derive2 { name="electivity"; version="1.0.2"; sha256="0clxsn9zkpdlq9jgq029ag310ji0hd0l23wfyqh8gkkj0091ip5a"; depends=[]; }; electoral = derive2 { name="electoral"; version="0.1.2"; sha256="1kf5ix0bmrh7zwgg87zf10s8pvq32fpqlmyw2dq1kf9gv3s91p04"; depends=[dplyr ineq tibble]; }; elementR = derive2 { name="elementR"; version="1.3.7"; sha256="01xbqargzc0bp1l5rcvxikr95ghj9w7w5byhrjbgwbia6y7zhxa2"; depends=[abind colourpicker devtools EnvStats gdata gnumeric httpuv lmtest outliers R6 reader readODS readxl shiny shinydashboard shinyjs stringr tcltk2 zoo]; }; - elevatr = derive2 { name="elevatr"; version="0.3.1"; sha256="0sjmzcbq5445fcxzwhcxni2wdajhaa4p56yyr034bphkmbissq6i"; depends=[httr jsonlite progress raster sf sp]; }; + elevatr = derive2 { name="elevatr"; version="0.3.4"; sha256="0ik4kvfyl9zxklwzpzbbvrcn4i7v9jckn00gl2fhzs2bfgpn7pbf"; depends=[httr jsonlite progress raster sf sp]; }; elexr = derive2 { name="elexr"; version="1.0"; sha256="1xmrzlp55z6k3psdg4a3x3rsilvq3k37v9r7ydfn80ahvqjz0fqh"; depends=[]; }; elfDistr = derive2 { name="elfDistr"; version="1.0.0"; sha256="11h91mwiw2pr0c8zvyzqql275falpiajv784n2rd5xs9azprqdd0"; depends=[Rcpp]; }; elhmc = derive2 { name="elhmc"; version="1.1.0"; sha256="0ngva7rnfj75fq93ycsv929m9ykijp48r7cvd6sfmi0sqsjinax5"; depends=[emplik MASS plyr]; }; elitism = derive2 { name="elitism"; version="1.0.4"; sha256="0n5g1nd1dd5wc76qa2va1lyxahg9p062l8wdqzq43ah6943pjzgr"; depends=[MASS]; }; elliplot = derive2 { name="elliplot"; version="1.2.0"; sha256="186i4gr8k9bifzssblln8z6wxfmnplls3kc4m2liiz86mzsnim9r"; depends=[]; }; ellipse = derive2 { name="ellipse"; version="0.4.2"; sha256="1wm5v7zdv2drgdba7z96jwsx74mqhlq80qgrvdb4vb5r02dcw68p"; depends=[]; }; - ellipsis = derive2 { name="ellipsis"; version="0.3.1"; sha256="1nvmkcca57d9067rcggw1gby80ibx5hplk2myz0cs9zwilaib2jg"; depends=[rlang]; }; + ellipsis = derive2 { name="ellipsis"; version="0.3.2"; sha256="0n0mm9jngklv7j9wa64jdji035z0smmnsp2dfwcz9isrxgjnc0m9"; depends=[rlang]; }; elliptic = derive2 { name="elliptic"; version="1.4-0"; sha256="1dhba0yfxjd5rlqsxp5a7s2hclfkla9wigsr39dlma67l6qjjmxn"; depends=[MASS]; }; - ellipticalsymmetry = derive2 { name="ellipticalsymmetry"; version="0.1"; sha256="10i656dg4ld7i5b21g528knirkl0lqk96rx5v32lm5zzf4axsl76"; depends=[ICSNP]; }; - elmNNRcpp = derive2 { name="elmNNRcpp"; version="1.0.2"; sha256="1labr1a9r563wg2m3insrpf98wcq5fdkql5fi58c9k8lg5b1knl3"; depends=[KernelKnn Rcpp RcppArmadillo]; }; + ellipticalsymmetry = derive2 { name="ellipticalsymmetry"; version="0.1.2"; sha256="035q6zjf0lnx704q5g51bhv1xp7y0yn31ph57zydk92gfpgn468l"; depends=[doParallel doRNG foreach ICSNP]; }; + elmNNRcpp = derive2 { name="elmNNRcpp"; version="1.0.3"; sha256="1cv6si3vd91q42dfg4dbyn3qd8ah4pywsdpma84y9kdnn1mmvnxb"; depends=[KernelKnn Rcpp RcppArmadillo]; }; elo = derive2 { name="elo"; version="2.1.1"; sha256="1i6qcw2plw12v065142kx58d911zr1gcsd1xic152zxvh89nmhxx"; depends=[pROC Rcpp]; }; elsa = derive2 { name="elsa"; version="1.1-28"; sha256="01sj2a4yhv5m6qj6ih26zw4yzd8s27lll7yp0yysjjrwz79a0fbq"; depends=[raster sp]; }; + eltr = derive2 { name="eltr"; version="0.1.0"; sha256="0f4sy2hhsbghasl5xcnqlgxqhb503pl73c5vdkgpcm73smrqbpbv"; depends=[data_table]; }; emIRT = derive2 { name="emIRT"; version="0.0.11"; sha256="1h91q9vi9cv14bmkaakyynw2z9sx51w0c2kw2in0x91wx7scmd0p"; depends=[pscl Rcpp RcppArmadillo]; }; - emayili = derive2 { name="emayili"; version="0.4.4"; sha256="181zdr7wj7r4z8crd81dncgil2dka0cnwqmhw5cpwyrgczl1fmkf"; depends=[base64enc curl glue httr magrittr mime stringi]; }; - emba = derive2 { name="emba"; version="0.1.7"; sha256="1pc72xfjsl4x63k7dw8f4pp8as6jlqdpwkgdw27znc9n4ffvmdpm"; depends=[Ckmeans_1d_dp dplyr igraph purrr readr rje stringr tibble tidyr tidyselect usefun visNetwork]; }; - embed = derive2 { name="embed"; version="0.1.3"; sha256="0mhk992mq3lpwc6xrhx080lr4ljqkx5vpf674gzbyxwkk26gyivy"; depends=[dplyr generics keras lme4 purrr recipes rlang rsample rstanarm tensorflow tibble tidyr uwot withr]; }; + emayili = derive2 { name="emayili"; version="0.4.10"; sha256="0v0jv1r1smp278fdyx0a35ah68q9xc8r9wprnv1nxxbfy5p2f1s1"; depends=[base64enc curl glue httr magrittr mime purrr stringi]; }; + emba = derive2 { name="emba"; version="0.1.8"; sha256="1bzp1cplr977w87bm0pvabvgai91a3j51pfjn4lc1ncjbr2v6wl0"; depends=[Ckmeans_1d_dp dplyr igraph purrr readr rje stringr tibble tidyr tidyselect usefun visNetwork]; }; + embed = derive2 { name="embed"; version="0.1.4"; sha256="13vz3px2vvzr56kynqc6vcy7swzq9v021g66dliychqyx7r9q49l"; depends=[dplyr generics keras purrr recipes rlang rsample tensorflow tibble tidyr uwot withr]; }; embryogrowth = derive2 { name="embryogrowth"; version="8.0"; sha256="0nz4zw3qr9a93cq1aliqa7m01xll8qg00m7rqgy85j905wmv8i1c"; depends=[deSolve HelpersMG numDeriv optimx]; }; emdbook = derive2 { name="emdbook"; version="1.3.12"; sha256="0ls3zxxlwmdv7zn1v9i1y9zc2sn0hbgmyjvsj7zn3ajsw7wwlih6"; depends=[bbmle coda lattice MASS plyr]; }; - emdi = derive2 { name="emdi"; version="2.0.1"; sha256="1yvfw06c569lwb6z54xa1j7fm6fqkxw0cdxi9g6hnf9qf1f2xw9z"; depends=[boot formula_tools ggplot2 gridExtra HLMdiag maptools MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 rgeos saeRobust spdep]; }; + emdi = derive2 { name="emdi"; version="2.0.2"; sha256="14f9v83n6nvryvnbkh9h1bf1rarqwqsypf9md7k304ilhjhcp16p"; depends=[boot formula_tools ggplot2 gridExtra HLMdiag MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 saeRobust spdep]; }; emdist = derive2 { name="emdist"; version="0.3-1"; sha256="1z14pb9z9nkd0f2c8pln4hzkfqa9dk9n3vg8czc8jiv0ndnqi7rq"; depends=[]; }; emg = derive2 { name="emg"; version="1.0.9"; sha256="04sm05xnjns7wcvpk35ywkxy6g0mm84r060mkmzh64wq58c2q06l"; depends=[moments]; }; - emhawkes = derive2 { name="emhawkes"; version="0.9.0"; sha256="1h6map6w66q91s6g1qr9wfk589cbvva1banqrxzzf29g7ihl15vh"; depends=[maxLik]; }; + emhawkes = derive2 { name="emhawkes"; version="0.9.5"; sha256="0b6kjwx2lsz5rj8819n71nvvchjpys90ns5n6gcgfwn5afzfdvql"; depends=[maxLik]; }; emld = derive2 { name="emld"; version="0.5.1"; sha256="0cvnfvzskvpcqzs6fwrpjcqrc6yrfciliy9jj0c9h4iyag0g0b9b"; depends=[jsonld jsonlite xml2 yaml]; }; emma = derive2 { name="emma"; version="0.1-0"; sha256="0psd8lrbcqla8mkhp0wlassaaimgwlmqy5yv2wwcq59mc5k1v27f"; depends=[clusterSim earth]; }; emme2 = derive2 { name="emme2"; version="0.9"; sha256="035s4h95ychqb14wib0dqbg4sjy9q01fsryr0ri25g1hsi5f8lpm"; depends=[reshape]; }; - emmeans = derive2 { name="emmeans"; version="1.5.3"; sha256="11x7bn260v91gb7qri1pq54l339zm4msa5frc8saqb9ykbg4dby5"; depends=[estimability mvtnorm numDeriv plyr xtable]; }; + emmeans = derive2 { name="emmeans"; version="1.6.0"; sha256="07iw3faprf98mncymbjbmfm2yi294yiwdg30xlql5sfx12qbf6r0"; depends=[estimability mvtnorm numDeriv plyr xtable]; }; emoa = derive2 { name="emoa"; version="0.5-0.1"; sha256="0rkr4d4fyqxmsrlbzar27z97qkw4cl1dkvfnhbdwpgg9fi1cixmz"; depends=[]; }; - emojifont = derive2 { name="emojifont"; version="0.5.3"; sha256="1cdrrl3hvrs8rskyy6zgr7q2mmg8yb9k8sld1m64zsp7y009g19k"; depends=[ggplot2 proto showtext sysfonts]; }; + emojifont = derive2 { name="emojifont"; version="0.5.5"; sha256="1hhrwilv36hd9gs1kcl2zsi6519md0h9aixjrm6lfclxvz8r6k1i"; depends=[ggplot2 proto showtext sysfonts]; }; emon = derive2 { name="emon"; version="1.3.2"; sha256="19khjjpyxvzhzihqq15w02l5v5ryyvxlklz1ch2gkmqcpnvyga32"; depends=[MASS mgcv]; }; emov = derive2 { name="emov"; version="0.1.1"; sha256="04w0bjyxvfb4ky573byp7j9b7x4gqycr5pgpnsl6rzag00zsf45a"; depends=[]; }; empichar = derive2 { name="empichar"; version="1.0.0"; sha256="1hcl6wbf4saxxp54j2w67csv6nzfgc3f3wdd9lk9grmkxsaab4rx"; depends=[Rcpp RcppArmadillo]; }; empiricalFDR_DESeq2 = derive2 { name="empiricalFDR.DESeq2"; version="1.0.3"; sha256="0h2mcdw4v3ac6dn0s4z37l4sdzbi12sxrnn0f0gc9z207dyyf6w3"; depends=[DESeq2 GenomicRanges]; }; emplik = derive2 { name="emplik"; version="1.1-1"; sha256="1kw8g8j075bsicdvgkjf4870rfv5c30gvmw6qkkaz3ki22x74w77"; depends=[quantreg]; }; emplik2 = derive2 { name="emplik2"; version="1.21"; sha256="1980bwc4fc4rwzlwya030n5rv8rq0s82hnw955mvaxrbmicnqlla"; depends=[]; }; - ems = derive2 { name="ems"; version="1.3.2"; sha256="1ambmd183f9959kwms71q3ks187y2ngpab45xlclpm2108n5j3pb"; depends=[boot rms survival]; }; + ems = derive2 { name="ems"; version="1.3.10"; sha256="16ixfwl4q8wkny44kk7qqjcywjj6dscz0a9vx38fi4jks72mhgrd"; depends=[boot rms survival]; }; emstreeR = derive2 { name="emstreeR"; version="2.2.2"; sha256="0lchkkn6s265xnk25bprijlc6nl62nwcp0l9nwplyw7q492ysg0q"; depends=[BBmisc BH ggplot2 Rcpp RcppArmadillo RcppMLPACK scatterplot3d]; }; - emuR = derive2 { name="emuR"; version="2.1.1"; sha256="1b6fzipnlx17ycy4nvprjk2lqmnjpi07v02bz86kas9j750xlnd2"; depends=[base64enc DBI dplyr git2r httpuv httr jsonlite mime purrr readr rlang RSQLite rstudioapi shiny stringr tibble tidyr uuid wrassp]; }; - emulator = derive2 { name="emulator"; version="1.2-20"; sha256="11z25iqyzck0s4hw0i86i9jsi52w9bjxx3zdpafssyfqfk7z5avw"; depends=[mvtnorm]; }; + emuR = derive2 { name="emuR"; version="2.2.0"; sha256="0yvlvbzpmaq60gh9mn1gf07bpdanjxwc50ck4zlw36n9vq6jvjp6"; depends=[base64enc DBI dplyr httpuv httr jsonlite mime purrr readr rlang RSQLite rstudioapi shiny stringr tibble tidyr uuid V8 wrassp]; }; + emulator = derive2 { name="emulator"; version="1.2-21"; sha256="0iikf6yinkqcgdnxx6v5kzfllhq3ppl75ym48vlcbnvkwv0v4l4v"; depends=[mvtnorm]; }; enRich = derive2 { name="enRich"; version="3.1"; sha256="0xl9rhz6mflzp1g5d51xz74dsm8qp16jbkflhzrha3vfirn2jh8q"; depends=[]; }; enc = derive2 { name="enc"; version="0.2.2"; sha256="16x8cckw0ah2yfczvv4j1jy4f8m23fkac38fz068964sv4l8z645"; depends=[]; }; encode = derive2 { name="encode"; version="0.3.6"; sha256="04zwclmqasbx54m77wqfr9jg4axhkkqnykaxv3if8lnr46fl3zyc"; depends=[]; }; @@ -7937,33 +8248,35 @@ in with self; { endogenous = derive2 { name="endogenous"; version="1.0"; sha256="079fmfxl9gf080zq5m1ixmgry9dawg2y6ixbfyc5da5jxf3zk9h8"; depends=[mvtnorm]; }; endorse = derive2 { name="endorse"; version="1.6.1"; sha256="067wrb5vhi9qn66rwp38cb4kss2yc55blh5dnl99fsvpc0qs146p"; depends=[coda]; }; endtoend = derive2 { name="endtoend"; version="2.29"; sha256="0dqzh2blb2h8ngchvfvnzx0gmilvx9ydvzqwfy4d9f58ixybn4d9"; depends=[ggplot2 pastecs]; }; - energy = derive2 { name="energy"; version="1.7-7"; sha256="13wnx5nwk7nsv7vf5sxhz4y0rxrnzm76ldgywk1bxrz67srqzf37"; depends=[boot Rcpp]; }; + energy = derive2 { name="energy"; version="1.7-8"; sha256="12a7gy681aq3l55iys044cs6sn1s2l5qihghpdl01cvv0ggfh26y"; depends=[boot gsl Rcpp]; }; energyr = derive2 { name="energyr"; version="0.1.2"; sha256="0gjw2cvpvhyywxlx3vfkhlh7zjwig46z1zwdc01zxwflvdx3z40n"; depends=[RgoogleMaps]; }; + enerscape = derive2 { name="enerscape"; version="0.1.0"; sha256="0bdxs7r2s2m10584mdwfifh5cl62fq7pw5bi8n2xg51x25x3kpdv"; depends=[gdistance Matrix raster rgdal sp]; }; enetLTS = derive2 { name="enetLTS"; version="0.1.0"; sha256="0lqnhrsg9fnkn8z5crdrajpgavk1knr9z4sbdffpa6q9n8s5pmhr"; depends=[cvTools ggplot2 glmnet reshape robustHD]; }; english = derive2 { name="english"; version="1.2-5"; sha256="0d6rin40wy2y6k75x8d5qvf03rfy139f309wrl8xwbdb1h8fjkd1"; depends=[]; }; engsoccerdata = derive2 { name="engsoccerdata"; version="0.1.5"; sha256="06fdgjgnk4lwshrkd0jad411x5nz9sxlri9fdhxrf2dr2hik4l8q"; depends=[dplyr magrittr tidyr]; }; - ennet = derive2 { name="ennet"; version="0.1.0"; sha256="07kcf3lz4jjikl94q5mgrs95xbiqiaa35kh1cc4nfk79l1fvydkg"; depends=[dplyr lubridate magrittr rvest stringr tibble xml2]; }; + ennet = derive2 { name="ennet"; version="0.2.1"; sha256="022nc413pz4nw0wrlffpia4w4nazma8ns2kbvj5vyz33hy13hcdz"; depends=[dplyr lubridate magrittr rvest stringr tibble tidyr xml2]; }; enpls = derive2 { name="enpls"; version="6.1"; sha256="12088v9xnj5b3dlakqz1hbzxz4mdai7xi7s2fpx8lj3y3lx7znmb"; depends=[doParallel foreach ggplot2 plotly pls reshape2 spls]; }; - enrichR = derive2 { name="enrichR"; version="2.1"; sha256="0ymhzs9d2wl0s9rvbqc1hqb78mlzwhlc7mmijpfqkm5r720pf6m1"; depends=[httr rjson]; }; + enrichR = derive2 { name="enrichR"; version="3.0"; sha256="0i3kfq4fkmx47n61zj5f87iv8ci6gbgy90a7s8dy9zbndzvbgya3"; depends=[ggplot2 httr rjson]; }; enrichwith = derive2 { name="enrichwith"; version="0.3.1"; sha256="05fhx323ani86wdxbjp8dgw4d1iq4kr1887646w072a6iq93bwhm"; depends=[]; }; ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.5"; sha256="0p744151pbj278lyc8d8p7rc20n70abpfgxz6jr10jarmq3r6x7l"; depends=[chron]; }; ensembleMOS = derive2 { name="ensembleMOS"; version="0.8.2"; sha256="16d8030zfdwifqrh45vz3gf5n0bix0mhsmsnydgjq1fghdklcmyx"; depends=[chron ensembleBMA evd]; }; ensembleR = derive2 { name="ensembleR"; version="0.1.0"; sha256="0xvq1jlsp7gsk46i847nfvadxwlh09gi2rgwss2wf2xmh1855ray"; depends=[caret]; }; + ensembleTax = derive2 { name="ensembleTax"; version="1.0.2"; sha256="1vp8vmxx70g30fis9kxfzhmbpikcl3q1qv991n1msj642ch19phj"; depends=[Biostrings DECIPHER dplyr stringr usethis]; }; ensemblepp = derive2 { name="ensemblepp"; version="1.0-0"; sha256="08k7v61p2sgr07dklabl0g7apsn9da60sfb14gfrwipwi8bsd4pv"; depends=[]; }; ensr = derive2 { name="ensr"; version="0.1.0"; sha256="18b81iswvby7k5akbfdyc6a8j1621d4d35hxmgjip5kyvf5cb3p8"; depends=[data_table ggplot2 glmnet]; }; ensurer = derive2 { name="ensurer"; version="1.1"; sha256="1gbbni73ayzcmzhxb88pz6xx418lqjbp37sdkggbrxcyhsxpdkid"; depends=[]; }; entcn = derive2 { name="entcn"; version="0.1.0"; sha256="0wpa1293d1bdlx8pikzfh4vqhw7p45bi140aj3x4m8p21h5b4gd6"; depends=[bitops RCurl rjson RYoudaoTranslate stringr]; }; - entropart = derive2 { name="entropart"; version="1.6-6"; sha256="0i1zmzhvjb070frc37mw13w1cq3n78j62a98yw0s12fd9vz5c6yc"; depends=[ade4 ape EntropyEstimation ggplot2 ggpubr reshape2 SPECIES vegan]; }; - entropy = derive2 { name="entropy"; version="1.2.1"; sha256="10vg4818q5g54pv2nn9x5i7pvky5nsv96syy47pz2mgqp1273cpd"; depends=[]; }; + entropart = derive2 { name="entropart"; version="1.6-7"; sha256="1liglcw45v6ywydi5664kxfb3z4s85ajdhbpbws7wy1x9wjdgaff"; depends=[ade4 ape EntropyEstimation ggplot2 ggpubr reshape2 SPECIES tibble vegan]; }; + entropy = derive2 { name="entropy"; version="1.3.0"; sha256="0fhhsy8ci9c73xwr2b167dfix0b7kqsk6kf46qqv1lmvbv11vxqa"; depends=[]; }; entrymodels = derive2 { name="entrymodels"; version="0.2.1"; sha256="0fz7jzax12pzw47iry4amgg9z4z3z94kig6r5dhcqa84kq02294v"; depends=[dplyr magrittr readr]; }; envDocument = derive2 { name="envDocument"; version="2.4.1"; sha256="074m7adnasvys28kjdgj9071fi90vsl4yv5zvpxik4crlx098dlw"; depends=[]; }; - envalysis = derive2 { name="envalysis"; version="0.4"; sha256="1qfg8z63qc6n8agv0g7n3qjcwid32axwkyyjjxa271by335aplha"; depends=[drc ggplot2]; }; + envalysis = derive2 { name="envalysis"; version="0.5.1"; sha256="1lvzb8jdbvrigw5va39fsfnkvwrgb9wvarrdllipszqxmnc8g5rk"; depends=[drc ggplot2 lmtest]; }; enveomics_R = derive2 { name="enveomics.R"; version="1.8.0"; sha256="00akdhqs7jabk7g33rwmxs92jcr39shy9s456nqxk6x4244d2vb3"; depends=[fitdistrplus investr sn]; }; - envi = derive2 { name="envi"; version="0.1.3"; sha256="09w5733gnicmylxp7asac2f0597js0yh657fzcp0rxf1p29gwcm9"; depends=[concaveman cvAUC doParallel fields foreach maptools pls raster rgeos ROCR sp sparr spatstat]; }; + envi = derive2 { name="envi"; version="0.1.8"; sha256="16nd0mqshjcxhnf88jr61aapqfy8riap80awimwapgcf9ssc04x6"; depends=[concaveman cvAUC doFuture doRNG fields foreach future iterators maptools pls raster rgeos ROCR sp sparr spatstat spatstat_core spatstat_geom spatstat_linnet]; }; enviGCMS = derive2 { name="enviGCMS"; version="0.6.6"; sha256="01y3qqh99aclarglpdg8mb9iikzkm1w62mv93m22lm8ami25a372"; depends=[animation BiocParallel data_table mixtools RColorBrewer Rdisop]; }; enviPat = derive2 { name="enviPat"; version="2.4"; sha256="1gvb7jmwwh4l44b50xmrq3bysr2iv6442yh9pdk6n81g3bgpz1d0"; depends=[]; }; enviPick = derive2 { name="enviPick"; version="1.5"; sha256="04q6zwqq2ip8b8h2n1jpgx1bzcvi7lazljs0806wiakbc79x232p"; depends=[readMzXmlData shiny]; }; - envir = derive2 { name="envir"; version="0.1.0"; sha256="1mxjccqgak0x1kq2vb8g6avjxnar8n5jyckk4r5qbn7fhvmnrrhc"; depends=[]; }; + envir = derive2 { name="envir"; version="0.2.0"; sha256="0257j77r2bxsznfgq813xpsjixan29iyc4is5b074xxaznv3fvmp"; depends=[]; }; envirem = derive2 { name="envirem"; version="2.2"; sha256="061p76w76hhs201p3l4wvbfbrcd9h8bigkn5xpsz5pmvhd2hrdkn"; depends=[knitr palinsol raster RSAGA sf]; }; envlpaster = derive2 { name="envlpaster"; version="0.1-2"; sha256="11a5n40k1ln5gxxvwq1vh4dhmhifhlm89hkhf36qnhj4bjh3v3y0"; depends=[aster aster2 caTools MASS]; }; envnames = derive2 { name="envnames"; version="0.4.1"; sha256="1fkbid2x60m63dnrxrdq7im49spn8m70g1gd8nqjq3xlv642ianm"; depends=[]; }; @@ -7972,78 +8285,84 @@ in with self; { eoffice = derive2 { name="eoffice"; version="0.2.1"; sha256="03g8r3xnsnnlyj7y07jm3qjhlv3pkf8v2lxpqzd24ncncxmbcxmi"; depends=[broom devEMF dplyr flextable ggplot2 ggplotify htmlwidgets magick magrittr officer plotly R_devices rvg]; }; epade = derive2 { name="epade"; version="0.3.8"; sha256="1alvsifc6i71ilm1xxs1d7sqlapb48bqd6z2n4wi6pqcjvwp7bif"; depends=[plotrix]; }; epandist = derive2 { name="epandist"; version="1.1.1"; sha256="0hxgbjns5bk82rgcmykxifnnxcnqdzmkimkkmpdif64zr5g3gjdg"; depends=[]; }; + epanet2toolkit = derive2 { name="epanet2toolkit"; version="0.5.1"; sha256="0ksb1cmjykmp0diic7xz5240d9n0sl6byp8rac3jpk3hb1p46r4d"; depends=[]; }; epanetReader = derive2 { name="epanetReader"; version="0.7.3"; sha256="05pwa6z03qsjwr9pxpbxycsd21p7mf5j5ajyg4yaas5g100s1k8c"; depends=[]; }; epca = derive2 { name="epca"; version="1.0.0"; sha256="1jzknymbsxvgrsiwnibhy9y5nlhsz4dyx22zpxs1493map5v8442"; depends=[clue GPArotation imager irlba matlab Matrix RSpectra tidyverse]; }; eph = derive2 { name="eph"; version="0.4.0"; sha256="0yznfhsp6sgymq02m4g477pnqlmmbdvwv32sidaa2giaf3nr4izj"; depends=[assertthat attempt curl dplyr expss glue htmltools janitor leaflet magrittr purrr questionr readr readxl rlang rvest stringr tibble tidyr tidyverse xml2 zoo]; }; epiDisplay = derive2 { name="epiDisplay"; version="3.5.0.1"; sha256="08ym6hcbmajzr4rasdb35fxk79vgpzfc16rmcm34f7f3zzz09dyl"; depends=[foreign MASS nnet survival]; }; epiGWAS = derive2 { name="epiGWAS"; version="1.0.2"; sha256="0jqblfmz02za3b2pgi15379bzgh98yv5kyv8kh0lkzhrmpgph2zj"; depends=[DescTools glmnet matrixStats SNPknock]; }; - epiR = derive2 { name="epiR"; version="2.0.17"; sha256="0ssf56z81abdwkznyx73imh86k98mz69hv78agpc4wbqsq6pazmh"; depends=[BiasedUrn lubridate pander survival]; }; + epiR = derive2 { name="epiR"; version="2.0.19"; sha256="0q2vmj1fznanvbckf3hsrszwvhyxbjjpk7m5rkyfv1jbdwbgny1h"; depends=[BiasedUrn lubridate pander survival]; }; epibasix = derive2 { name="epibasix"; version="1.5"; sha256="0ivr51x37cbdryli9b4p4iq9v2c90zwmywrwdmg7ryq5vprvvbp0"; depends=[]; }; epicontacts = derive2 { name="epicontacts"; version="1.1.0"; sha256="0f4a1y311z3fxw7ygj6fgsq6d2qn0ivxsjlh742pkmg3jb63s0f3"; depends=[colorspace dplyr igraph magrittr threejs visNetwork]; }; epidata = derive2 { name="epidata"; version="0.4.0"; sha256="0v3s1vrf2iqh03rkkwrlz6mhpbsbjxkayrqdx04vrnja4i9ljshk"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr tinytest xml2]; }; epifitter = derive2 { name="epifitter"; version="0.2.0"; sha256="158llnpbqrmgg238ax1ciyfa30rq4mxyjyg61gs82d0d36rhb93i"; depends=[DescTools deSolve dplyr ggplot2 knitr magrittr minpack_lm tibble tidyr]; }; epiflows = derive2 { name="epiflows"; version="0.2.0"; sha256="09ri1p73ih0i08irc06ff169hi5vcl8bdi63b056kzxgmv17yqkp"; depends=[epicontacts geosphere ggmap ggplot2 htmltools htmlwidgets leaflet sp tibble visNetwork]; }; - epigraphdb = derive2 { name="epigraphdb"; version="0.2.1"; sha256="0c8qpnf9rbhxzwvphci37dfxi9vbc5vlh31ckvwp12y9kwyxylvc"; depends=[glue httr jsonlite magrittr purrr tibble]; }; + epigraphdb = derive2 { name="epigraphdb"; version="0.2.2"; sha256="1kd46anhijcx4sw4ghzd417vwdl64375cbrlj0shcvv9gcc3h38n"; depends=[glue httr jsonlite magrittr purrr tibble]; }; epikit = derive2 { name="epikit"; version="0.1.2"; sha256="0b9kc7qr7nkafmak60pyj7hln19w4zp33pk5y48qmfsxgarl6pv3"; depends=[binom dplyr forcats glue rlang scales tibble tidyr tidyselect]; }; epimdr = derive2 { name="epimdr"; version="0.6-5"; sha256="1nxdlz7gl9vrha9iw92y0s9dmm101gkz0rsqxqg1rdxanr6hs6sh"; depends=[deSolve polspline shiny]; }; epinet = derive2 { name="epinet"; version="2.1.8"; sha256="10bgq66n99kkz0nhmsz508aypxk57zk19p5l3xrb28n72k4rfgrf"; depends=[network]; }; - epinetr = derive2 { name="epinetr"; version="0.93"; sha256="05q6mdgl1c24i3cfjh5bgb7x75yhg4ll45p7kzl77q8lsp26z8b6"; depends=[GA ggplot2 igraph Rcpp RcppAlgos reshape2 vcfR]; }; + epinetr = derive2 { name="epinetr"; version="0.94"; sha256="1bd9qfs7q4d199lqiny16ck0y2ji4p2nkx7ds5dafpk5pqa314fc"; depends=[GA ggplot2 igraph Rcpp RcppAlgos reshape2 vcfR]; }; epiphy = derive2 { name="epiphy"; version="0.3.4"; sha256="04wsppjycnrzrml3zxrpr0xdxxas3hj8rskiivx5vfmfjpwipq4r"; depends=[ggplot2 msm pbapply Rcpp transport]; }; episcan = derive2 { name="episcan"; version="0.0.1"; sha256="02687f8gpc2czn19lapvazd6mnm8902ay0lhgi3wdrzfhir42m4r"; depends=[]; }; - episensr = derive2 { name="episensr"; version="0.9.6"; sha256="193abdngrvxriv1dxjv0panf0whczli637xfs2fr05p588lljpr6"; depends=[actuar boot ggplot2 gridExtra magrittr plyr reshape trapezoid triangle]; }; + episensr = derive2 { name="episensr"; version="1.0.0"; sha256="0w06dm26dgmq423jgx7m2786pf07kli0fh8jyknii7qm4jgqiqhm"; depends=[actuar boot dagitty ggdag ggplot2 magrittr trapezoid triangle]; }; episplineDensity = derive2 { name="episplineDensity"; version="0.0-1"; sha256="0nmh97xajnnh54i04yq8fdici4n5xvcbpdbjdbz79483gnils4vn"; depends=[nloptr pracma]; }; epistasis = derive2 { name="epistasis"; version="0.0.1-1"; sha256="0dfh26bs72i01hpxpgpgyiwpmg9mjpib8zynhc5ssxa0skm518wz"; depends=[glasso igraph Matrix tmvtnorm]; }; epitab = derive2 { name="epitab"; version="0.2.2"; sha256="0yi65bblsikwsa9i7wys1mqf6pp6j01kyc8xkyrhs5n62y1k68nc"; depends=[kableExtra knitr MASS survival xml2]; }; epitools = derive2 { name="epitools"; version="0.5-10.1"; sha256="0jqn3pas4lsans50jwakmvpyc7m7x0kxq6dzyckd3vgww56qa65l"; depends=[]; }; epitrix = derive2 { name="epitrix"; version="0.2.2"; sha256="1rqpvdky002h6mz636b77l4kd0im16pww62l6vnwh83si1m9pkki"; depends=[distcrete sodium stringi]; }; - epitweetr = derive2 { name="epitweetr"; version="0.1.24"; sha256="0x80av928kcf9n0ipbyy1ww7rlknc5y2j79cgha11f998xbcxv3q"; depends=[bit64 dplyr DT emayili ggplot2 httpuv httr jsonlite keyring magrittr plotly plyr readxl rgdal rgeos rmarkdown rnaturalearthdata rtweet shiny sp stringr tidytext tidyverse tokenizers xml2 xtable]; }; - eplusr = derive2 { name="eplusr"; version="0.13.0"; sha256="011il56agqv4d9xd3qgh1pkxfvxr10knx5h3q8s13237x3f42241"; depends=[callr checkmate cli crayon data_table decido hms lubridate processx progress R6 rgl RSQLite stringi units]; }; + epitweetr = derive2 { name="epitweetr"; version="0.1.28"; sha256="0iqdn1vc3h3ng10vhljnr8bs5sn0mnfwpv11zq1dvw6yyh9b5ia6"; depends=[bit64 dplyr DT emayili ggplot2 httpuv httr jsonlite keyring magrittr plotly plyr readxl rgdal rgeos rmarkdown rnaturalearthdata rtweet shiny sp stringr tidytext tidyverse tokenizers xml2 xtable]; }; + eplusr = derive2 { name="eplusr"; version="0.14.1"; sha256="1kgpsbsva8dbvzsd0wpxbk53rixxc0dqava9jfhjdpnm704x8bjh"; depends=[callr checkmate cli crayon data_table hms lubridate processx progress R6 RSQLite stringi units]; }; eply = derive2 { name="eply"; version="0.1.2"; sha256="0al44pvqf6ls3dh129vlv3g56hk1nbql09rj0qsb04d9kaz9anrp"; depends=[magrittr]; }; epoc = derive2 { name="epoc"; version="0.2.6-1.1"; sha256="1qlj4cl7mh5k52v2ippfs3cish5iadnix5w46p25hjqiriksclna"; depends=[elasticnet irr lassoshooting Matrix survival]; }; eponge = derive2 { name="eponge"; version="0.1.0"; sha256="19wd80l35acij793spxglcwz346i2iivk6n0q2304wjcca6qzds7"; depends=[rlang]; }; - epos = derive2 { name="epos"; version="0.1.3"; sha256="0b1i7v1h253viawgv789ch5hi6xmwg7svwrlk9l1mpwzvig9r27a"; depends=[ggplot2 gridExtra hash mongolite stringr testthat TopKLists xtable]; }; + epos = derive2 { name="epos"; version="1.0"; sha256="0z3r0128ql1jd8nkadia9w97g4nr3w4azvhpj7bjcaf3smh733d8"; depends=[cowplot ggplot2 gridExtra hash mongolite stringr testthat TopKLists VennDiagram xtable]; }; epr = derive2 { name="epr"; version="3.0"; sha256="0czfz6qkcpa2qqs3pqii27hgpdvdzfrvxl0ip67v58hamq7kvjfv"; depends=[car lme4]; }; epsiwal = derive2 { name="epsiwal"; version="0.1.0"; sha256="0lmcmiqcc1pjj1d0zyn0hc23if1lkm85p6vcjqbddpnv9ags2mbh"; depends=[]; }; - epubr = derive2 { name="epubr"; version="0.6.1"; sha256="0rp9q6hriilps5h6nc1226w5dvzws1g78pg3ldrq2r4dakpvsmjj"; depends=[dplyr magrittr tibble tidyr xml2 xslt]; }; - epwshiftr = derive2 { name="epwshiftr"; version="0.1.1"; sha256="1cyb46i3kml6zzn12hs9lpcsgxkwp5pslfy0nw8i4wydl2bgk0sa"; depends=[checkmate data_table eplusr fst future_apply jsonlite progressr psychrolib rappdirs RNetCDF units]; }; + epubr = derive2 { name="epubr"; version="0.6.2"; sha256="1kwqm8lnqvb9lpxiwx3llvh3k6qp9rl07rfyawyd3g4ngdfyg581"; depends=[dplyr magrittr tibble tidyr xml2 xslt]; }; + epwshiftr = derive2 { name="epwshiftr"; version="0.1.2"; sha256="02qqw65pw1gk8yvw86ksbd2xdriavzavq7r378hp19pf7hzvr8bp"; depends=[checkmate data_table eplusr fst future_apply jsonlite progressr psychrolib rappdirs RNetCDF units]; }; epxToR = derive2 { name="epxToR"; version="0.4-1"; sha256="00m64ham9fd9dsw37ic2m62fy4pvmwfwmjx8cg6n4rwbgq9q49sg"; depends=[httr XML]; }; - eq5d = derive2 { name="eq5d"; version="0.8.0"; sha256="0cx5v4wmqyqwkyinblcgxkp59fx7laiqzw2d5h7c0cagah1iq7a4"; depends=[]; }; + eq5d = derive2 { name="eq5d"; version="0.9.0"; sha256="0lasidbh4h4wcfy5bin9axcwy8pvhsshlqjq6n04q2xdzg6h7q8w"; depends=[]; }; eqs2lavaan = derive2 { name="eqs2lavaan"; version="3.0"; sha256="1lj6jwkfd84h9ldb6l74lrx2pnsl1c0d7mnrcrjkska87djb2nzd"; depends=[lavaan stringr]; }; eqtl = derive2 { name="eqtl"; version="1.1-7"; sha256="0xfr8344irhzyxs9flnqn4avk3iv1scqhzac5c2ppmzqhb398azr"; depends=[qtl]; }; equalCovs = derive2 { name="equalCovs"; version="1.0"; sha256="18w7panyd6mhdr3x1iz9fkrw7min22rishs4xhkxgxs3nnyglkrn"; depends=[]; }; - equaltestMI = derive2 { name="equaltestMI"; version="0.6.0"; sha256="1qlm28144fidc56czvd0kg4i9wrmb8x1ll0sb1m4lvdxvh4gh66m"; depends=[lavaan]; }; + equaltestMI = derive2 { name="equaltestMI"; version="0.6.1"; sha256="09wh4907vf54z3g2a1i1j4m5vkaz97jp3qyrmxbg0bbbq0c68ffg"; depends=[lavaan]; }; + equatags = derive2 { name="equatags"; version="0.1.0"; sha256="1269aay5bnm3r9vcpm09d7r4xxhbyh5f7a3nzw73248wv8x4kkhy"; depends=[locatexec rappdirs xml2 xslt]; }; equate = derive2 { name="equate"; version="2.0.7"; sha256="07cji0z139fk70d4wvrpk5m34fq1pfnqrsw336lgnp5a7zp3jz7n"; depends=[]; }; equateIRT = derive2 { name="equateIRT"; version="2.1.0"; sha256="1g8gs00ralh5zw1fv3xd4c2xrb8gxgb7srcp0hgbpr0f7hw53fjm"; depends=[mirt statmod]; }; - equateMultiple = derive2 { name="equateMultiple"; version="0.0.1"; sha256="1bs0svnipfbix5zrjb59i2kzzfah8267yyw2mh9bxfzli7gbwfha"; depends=[equateIRT numDeriv Rcpp RcppArmadillo statmod]; }; - equatiomatic = derive2 { name="equatiomatic"; version="0.1.0"; sha256="1w5v1l9807d5hgxm0yj5lfgb7k7w8jbzkii5bla42x9fvjycqfzh"; depends=[broom]; }; + equateMultiple = derive2 { name="equateMultiple"; version="0.1.0"; sha256="0ciwzaybr15r5b72mba9hhxlnbyfbc895a2yj6wz25dghcs6vlhx"; depends=[equateIRT numDeriv Rcpp RcppArmadillo statmod]; }; + equatiomatic = derive2 { name="equatiomatic"; version="0.2.0"; sha256="16lq6nc3i8qsp9z177nrldc6bk2jblx11k1pd9vib5876469av5i"; depends=[broom broom_mixed knitr]; }; equivUMP = derive2 { name="equivUMP"; version="0.1.1"; sha256="05ihbr6dd9qv89ll90ynk4g3d3xy2w5q0m696djfa63f1x92c01w"; depends=[]; }; equivalence = derive2 { name="equivalence"; version="0.7.2"; sha256="170l5gnk0dkjkfsx7qyrw56ircwsjzz9cvhakgyrqh7bj5734i79"; depends=[boot lattice PairedData]; }; equivalenceTest = derive2 { name="equivalenceTest"; version="0.0.1.1"; sha256="1lr1qc4mv8f9hwqidj1rwhxqm1fb8cf1hnb1k32xpdqwzsxbfa47"; depends=[cubature polynom Rdpack rootSolve]; }; + era = derive2 { name="era"; version="0.3.1"; sha256="1x633yz49sfm27gby5sa6nbwx0mc1h606hxh5yvrjqnjlkk7xpgr"; depends=[magrittr pillar rlang vctrs]; }; erah = derive2 { name="erah"; version="1.1.1"; sha256="1xl0ixn8dkap18la0qnaxb2qgf48vspfzybgwynpb3ib95gw9ji0"; depends=[igraph ncdf4 nnls quantreg Rcpp signal XML]; }; erboost = derive2 { name="erboost"; version="1.3"; sha256="09hlpn6mqsmxfrrf7j3iy8ibb2lc4aw7rxy21g3pgqdmd9sbprim"; depends=[lattice]; }; ercv = derive2 { name="ercv"; version="1.0.1"; sha256="0rs4yhm9sjnqkrgqqy6b8wj9fgk910hxc8d7zi4qwql0v1gid27l"; depends=[]; }; erer = derive2 { name="erer"; version="3.0"; sha256="143ygibzjsxlmf3p5ldcc4dpr3mcm873g4rwgb55q912bdhsn725"; depends=[lmtest systemfit tseries urca]; }; + ergMargins = derive2 { name="ergMargins"; version="0.1.2"; sha256="1ns5rkkja4f8jd2g2g0xvkvisg9agaxfgw8a82kq0hcx4k29xvga"; depends=[btergm ergm Matrix network numDeriv sna statnet xergm_common]; }; ergm = derive2 { name="ergm"; version="3.11.0"; sha256="1wp93y0sjw2ybaflkzw7q7blf6x5pkrcnyk5wcxk9hmd9fs0cmaf"; depends=[coda lpSolve MASS Matrix network purrr rlang rle robustbase statnet_common tibble trust]; }; ergm_count = derive2 { name="ergm.count"; version="3.4.0"; sha256="1bvbqckssqj91q56nz17mrvadk1i2mm301z9rj8qkh8116fwf93w"; depends=[ergm network statnet_common]; }; ergm_ego = derive2 { name="ergm.ego"; version="0.6.1"; sha256="1khmlx0s8v5dhl38b1bqdb6lpfp7adrfs7r0lcg5hrczlxsy293f"; depends=[coda ergm network purrr RColorBrewer statnet_common tibble]; }; ergm_rank = derive2 { name="ergm.rank"; version="1.2.0"; sha256="1vc96rjsqvs6ybnzkpv12h0hsrx2s96k4hjilzjpjnhbazh5vynz"; depends=[ergm network statnet_common]; }; ergm_userterms = derive2 { name="ergm.userterms"; version="3.10.0"; sha256="1aqrgdayh73dkr71gf8vawlj6qgv66pxr4klxgqb6ffan66b5p8g"; depends=[ergm network statnet_common]; }; + ergmclust = derive2 { name="ergmclust"; version="1.0.0"; sha256="18vx02vr2wi0gw09g4hxb8glf38y06v4a0c6q666qv8bgcb0pgkw"; depends=[igraph lda MASS quadprog Rcpp RcppArmadillo viridis]; }; ergmharris = derive2 { name="ergmharris"; version="1.0"; sha256="1bfijhsljlykb94wi25lbpv35zkmgqpmgzmxcq98gjvzbn5j9pdq"; depends=[]; }; ergmito = derive2 { name="ergmito"; version="0.3-0"; sha256="0ajfx8g31p0lf0ajrgssb9lkhs1bxkz19z3q99l500znlivc2fy2"; depends=[ergm MASS network Rcpp RcppArmadillo texreg]; }; + erify = derive2 { name="erify"; version="0.2.0"; sha256="1xin6zljxn8jl45zv4ffjkzsrz98akfqz8vss9a6mb13frgcmi97"; depends=[glue knitr magrittr rlang rstudioapi]; }; erp_easy = derive2 { name="erp.easy"; version="1.1.0"; sha256="193n45w0rq3cy0nmxvv0h6s3yr8kfjlg90nd4dnqlsq85zlsizij"; depends=[gtools plyr signal]; }; erpR = derive2 { name="erpR"; version="0.2.0"; sha256="1y6abc5fkcyyjh36maj1zbxppqzwd5wkvzvqahyvzsz5fqpjkcdx"; depends=[rpanel]; }; err = derive2 { name="err"; version="0.2.0"; sha256="1915b0vmqdd8whwdrqjphld1jaxawh5b7di6wf7q3sx779lblsrs"; depends=[]; }; - erratum = derive2 { name="erratum"; version="2.0.0"; sha256="0640igaixqmfg5y8af6rn6gq92sh1mq0wyjqh2rhihnbgf6y0wic"; depends=[R6 rlang]; }; + erratum = derive2 { name="erratum"; version="2.1.0"; sha256="0d2kagq4rdh37swx8kzg04k6cn1rrjni48l4f86wfdgs1bnkabkn"; depends=[R6 rlang]; }; errint = derive2 { name="errint"; version="1.0"; sha256="1ya7fsvwhmgxw87r32m4345n8pw2pbpv026xvml03s1kiam8qwbw"; depends=[rootSolve VGAM]; }; errorist = derive2 { name="errorist"; version="0.1.0"; sha256="0zq5h2wffn9d3f3blzh736478k91smlvz5hxy55hcjqffpxcp4ah"; depends=[searcher]; }; errorizer = derive2 { name="errorizer"; version="0.2.1"; sha256="10p7ydm81x2gls0wn692llgj2rxhg4s96rv7gvihmgi5dflraypq"; depends=[]; }; - errorlocate = derive2 { name="errorlocate"; version="0.5.1"; sha256="057v19917dqcw3qfcw2mwwsxcahl4dhid3252bhvl5qgbnj1dxfs"; depends=[lpSolveAPI validate]; }; + errorlocate = derive2 { name="errorlocate"; version="0.9.9"; sha256="1747vv9k276apahvirjmzxdc6zn3zw6zl9gym9aia7v36bm2q5g0"; depends=[lpSolveAPI validate]; }; errors = derive2 { name="errors"; version="0.3.6"; sha256="1404314glbqnicrwnfzmxxf7l97pgrb2gjkgkwn100p0sj83kjdg"; depends=[]; }; errum = derive2 { name="errum"; version="0.0.3"; sha256="18frrfnhnmg4fjlpfwj8aklzfwafpwqvagm0aschkqc8mz6wnjbz"; depends=[Rcpp RcppArmadillo]; }; es_dif = derive2 { name="es.dif"; version="1.0.2"; sha256="1swxg8mdp9jj9f0x0cawhhbx8gmmpsgqlbifx2v04a2vkgdkigqf"; depends=[]; }; esDesign = derive2 { name="esDesign"; version="1.0.2"; sha256="16dhddw4gp210bb1mmx5df1ziffadiz06s4i3znnzac8rv5564hp"; depends=[]; }; esaBcv = derive2 { name="esaBcv"; version="1.2.1"; sha256="0hgjcdbiy1a71vsb2vcyp0xmhy6wi4nlh1sqsfb2vxckc95i9i21"; depends=[corpcor svd]; }; - esaddle = derive2 { name="esaddle"; version="0.0.6"; sha256="0i89yid4zryc95aj8n512wj3cs5nx351w4rc1nghq5a7vp139fa7"; depends=[doParallel mvnfast plyr Rcpp RcppArmadillo]; }; + esaddle = derive2 { name="esaddle"; version="0.0.7"; sha256="1r79qcirlx7g9w523nz81f5f22paid5dhag2lqj7jf33w0ggaknn"; depends=[doParallel mvnfast plyr Rcpp RcppArmadillo]; }; esaps = derive2 { name="esaps"; version="0.1.0"; sha256="1rchs4i7n221gyhj9kbka4zmi2lf72q3ak2pdxkr7w6pcx6803yz"; depends=[plyr readODS readxl]; }; esback = derive2 { name="esback"; version="0.3.0"; sha256="09k895028hqa62m8fhbg5b33ry0in6kbrw0lnphn0rgjhlifxp4z"; depends=[esreg]; }; esc = derive2 { name="esc"; version="0.5.1"; sha256="0gns7gz55p6pha05413r3hlvd7f2v1amxkg13d197mab1ypqic7q"; depends=[]; }; @@ -8052,14 +8371,15 @@ in with self; { eshrink = derive2 { name="eshrink"; version="0.1.2"; sha256="0min4j1dyd08i0fyn9a4iasjlhq08bn74bjz8vj1gq9l114v795k"; depends=[glmnet MASS]; }; esmisc = derive2 { name="esmisc"; version="0.0.3"; sha256="1d6xrdxwn85c8s60s7vzaymh7wa9f7fzd79hq5spzd12fr3zisvj"; depends=[ggplot2 raster readr]; }; esmprep = derive2 { name="esmprep"; version="0.2.0"; sha256="076sm26mkkvig2g04k32z2dlp2h9gnqgzckhirl4pqm01siknl61"; depends=[lubridate]; }; - esquisse = derive2 { name="esquisse"; version="0.3.1"; sha256="1fkh3zmhx4g9sl7ykmrqvghjjz66g2mg0646sdvhq8yyb63fpir3"; depends=[ggplot2 htmltools jsonlite miniUI rlang rstudioapi scales shiny shinyWidgets stringi]; }; + esquisse = derive2 { name="esquisse"; version="1.0.1"; sha256="051p49g6b5j9j4w3rahgs7cf2v22mni4680s0as83l5p9rhmx41n"; depends=[datamods ggplot2 htmltools jsonlite rlang rstudioapi scales shiny shinyWidgets styler]; }; esreg = derive2 { name="esreg"; version="0.5.0"; sha256="1njwqm3hrcxwl6y7gwa4zq0q5139293qk503ahw23dxwzdsiy2z5"; depends=[Formula quantreg Rcpp RcppArmadillo]; }; ess = derive2 { name="ess"; version="1.0"; sha256="0nqmpih9iyny4ss6llhjq08lfc8n0znz0fdmsjn1js48r85rcqxb"; depends=[igraph Matrix Rcpp]; }; essHist = derive2 { name="essHist"; version="1.2.2"; sha256="0rvlxfcl42h4pjqf37mx7bc4k21iwvnys6l5rf2jsl7yk1b9hmbn"; depends=[Rcpp]; }; - essurvey = derive2 { name="essurvey"; version="1.0.5"; sha256="078bm5knrhij4rdv7hqv5ci0dfdci7lw4yrqbikp8miapivv88vp"; depends=[haven httr rvest tibble xml2]; }; + essentials = derive2 { name="essentials"; version="0.1.0"; sha256="163wv4szfanbpiw5f6lhw1dnns5prql43iz27zgcp5z2rsxlb894"; depends=[]; }; + essurvey = derive2 { name="essurvey"; version="1.0.7"; sha256="07z6bdk76528cg5pdchh1kcsm7xrhpqzzxm2llyh0y12fa7mwscy"; depends=[haven httr rvest tibble xml2]; }; estatapi = derive2 { name="estatapi"; version="0.4.0"; sha256="0wp5w9w0b832fnl7kchjqmychnf5896q50grw8hwdc1km14dfzkg"; depends=[dplyr httr purrr readr rlang tibble]; }; estimability = derive2 { name="estimability"; version="1.3"; sha256="0cifdaa71spkcxl4db4z884jrya865sg3dhcv4isd8fnzg2pjcd3"; depends=[]; }; - estimatr = derive2 { name="estimatr"; version="0.28.0"; sha256="1gv5k21xw4id4r4aylhg9ym5isn3v2yrzrd4slwz9a9mf7gxc2ij"; depends=[Formula generics Rcpp RcppEigen rlang]; }; + estimatr = derive2 { name="estimatr"; version="0.30.2"; sha256="0sdsfngxckcis2gfd2jz1dq8vlh7zcf592xqlglbv14755s348z2"; depends=[Formula generics Rcpp RcppEigen rlang]; }; estimraw = derive2 { name="estimraw"; version="1.0.0"; sha256="0z591mblbzc3qv9pyv8zn0r5r3d8f1l02sxdc649gl1lb40kalz0"; depends=[dplyr]; }; estmeansd = derive2 { name="estmeansd"; version="0.2.1"; sha256="053mf9yq095dvlz2cj5haav6yabvgj78qpp411xd9nr1ac17jxz9"; depends=[metaBLUE]; }; estout = derive2 { name="estout"; version="1.2"; sha256="0whrwlh4kzyip45s4zifj64mgsbnrllpvphs6i5csb7hi3mdb3i5"; depends=[]; }; @@ -8069,16 +8389,16 @@ in with self; { etable = derive2 { name="etable"; version="1.2.0"; sha256="17xahaf2fz1qgqjaw8qbnss95il6g47m3w00yqc5nkvv37gs0q7c"; depends=[Hmisc xtable]; }; etasFLP = derive2 { name="etasFLP"; version="2.1.0"; sha256="1dpiilb2ylkk1fidjd1x3s9n1pj9h66yg2wx4faxbn69dkky9qnd"; depends=[fields mapdata maps]; }; ether = derive2 { name="ether"; version="0.1.6"; sha256="1f3phh5vdfvlxqrpzsn6ysz0q3mbhr862fzsd3sp8m8qhry86cbx"; depends=[dplyr httr jsonlite Rmpfr]; }; - ethnobotanyR = derive2 { name="ethnobotanyR"; version="0.1.7"; sha256="13xbiywrw6ixby9s1ipwb45p9c96d75vw906fpzy6axdv2c4pp70"; depends=[circlize cowplot dplyr ggplot2 ggridges magrittr reshape]; }; + ethnobotanyR = derive2 { name="ethnobotanyR"; version="0.1.8"; sha256="1ipwh4kxraa7rx6kvjpwq3b6jb7b4aa9kwcj7vrd4xhj4yxymqzb"; depends=[circlize cowplot dplyr ggalluvial ggplot2 ggridges magrittr reshape2]; }; etl = derive2 { name="etl"; version="0.3.9"; sha256="133kas3pf863dlgxjhl2x61xkjl5vndsav69zskj9ngz875avjm2"; depends=[DBI downloader dplyr fs janitor lubridate readr rlang rvest stringr tibble usethis xml2]; }; etm = derive2 { name="etm"; version="1.1.1"; sha256="1hvrplmdpjjpjji663rw0vjbbrzj2nvr04d1nkc8bf46p4ixyxgy"; depends=[data_table lattice Rcpp RcppArmadillo survival]; }; etma = derive2 { name="etma"; version="1.1-1"; sha256="0g9244yx50y1gw0f37hskbcgyv4nldmzr86v3rmf3afabmjbyzjj"; depends=[]; }; - etrader = derive2 { name="etrader"; version="0.1.2"; sha256="1ynwhcyzba4v1vyhgws1fiyzkaiqgv7bhzjf4kszc0x7jh2sbdn5"; depends=[dplyr httr jsonlite magrittr purrr rvest urltools]; }; + etrader = derive2 { name="etrader"; version="0.1.3"; sha256="1iq80vn7j2sywlla01f6vrfyjjs4lk606kc8z4xlfqj8d27r9r9w"; depends=[dplyr httr jsonlite magrittr purrr rvest urltools]; }; etrunct = derive2 { name="etrunct"; version="0.1"; sha256="0ayazgyqlc8jcqr03cwfmfhm4pck6xri1r6vkgqy4arqkrrnrcqr"; depends=[]; }; - eudract = derive2 { name="eudract"; version="0.9.2"; sha256="1yl72vhfaqq005h00bxafdqxpbm0qf9349gd9fq80h5vy20qrm3q"; depends=[dplyr magrittr tidyr xml2 xslt]; }; + eudract = derive2 { name="eudract"; version="0.9.3"; sha256="0bbs9lqmw992q6d9bp7xsssnn8hipb4zx9lyvpdakfmv08ykl3fn"; depends=[dplyr magrittr tidyr xml2 xslt]; }; eulerian = derive2 { name="eulerian"; version="1.0"; sha256="0yhpnx9vnfly14vn1c2z009m7yipv0j59j3s826vgpczax6b48m0"; depends=[graph]; }; eulerr = derive2 { name="eulerr"; version="6.1.0"; sha256="1r7y01vj293r1lhxk4anqqq6k2gnflzx2a2sfsyf7ccqmw95w0cj"; depends=[GenSA polyclip polylabelr Rcpp RcppArmadillo]; }; - eurlex = derive2 { name="eurlex"; version="0.3.4"; sha256="067kfjsmagmsjcmzg8lg5f324ngclb6d8i8d16wjsn6kah82nfak"; depends=[antiword dplyr httr magrittr pdftools readr rlang rvest stringr tidyr xml2]; }; + eurlex = derive2 { name="eurlex"; version="0.3.5"; sha256="05qxw6qj6cqr7jwsxhvay7r5q7g4s0pmr2n062cail9pm8rs97gr"; depends=[antiword dplyr httr magrittr pdftools readr rlang rvest stringr tidyr xml2]; }; europepmc = derive2 { name="europepmc"; version="0.4"; sha256="174nnyc2mbgqxb5kgqabn1vf71c2mps7ig2bclq4is0f7nb64pym"; depends=[dplyr httr jsonlite plyr progress purrr rlang tibble tidyr urltools xml2]; }; europop = derive2 { name="europop"; version="0.3.1"; sha256="1ym257bxr4a0dmln1j8x3pf87wrryzgqyzhvk61whc6n2bj62x1s"; depends=[]; }; eurostat = derive2 { name="eurostat"; version="3.6.84"; sha256="03mfjjc3jjdrg4plb31dm4s4fv8cfmwpa3vkbcjjzz7jy8zyn7yq"; depends=[broom classInt countrycode curl dplyr httr jsonlite lubridate RColorBrewer readr RefManageR sf sp stringi stringr tibble tidyr tidyselect]; }; @@ -8088,7 +8408,7 @@ in with self; { evaluate = derive2 { name="evaluate"; version="0.14"; sha256="0a2y7j534gbgixkwj9r1z76l2vssw4g1hznzbpclc076wkdqpj58"; depends=[]; }; evaluator = derive2 { name="evaluator"; version="0.4.2"; sha256="0k2fwim023lbnxq67hhv03cds824x8n374pnqsk67ajgahxwh3by"; depends=[cli crayon dplyr extrafont ggplot2 magrittr mc2d purrr readr readxl rlang rstudioapi scales stringi tibble tidyr vctrs viridis]; }; evclass = derive2 { name="evclass"; version="1.1.1"; sha256="00lbhcgswpv0amz0mb93kx9p91sf0d7zvxfw9i8x1zpmpfd6nhcj"; depends=[FNN]; }; - evclust = derive2 { name="evclust"; version="1.1.0"; sha256="06w1spqz5gidycwzwf51414iy182bc1ncis7m4bwx6a268vrznnx"; depends=[FNN limSolve Matrix mclust plyr quadprog R_utils]; }; + evclust = derive2 { name="evclust"; version="2.0.0"; sha256="1r97slc6wiqc9fkza02mxzacjw0kinaf2c4yjbwl7f6z1a24jbyb"; depends=[FNN kernlab limSolve MASS Matrix mclust plyr quadprog R_utils]; }; evd = derive2 { name="evd"; version="2.3-3"; sha256="1d2r8ppblxrq6s60pf0gv4rp8ja58j8lbpax8a996ais1hpfzi9g"; depends=[]; }; evdbayes = derive2 { name="evdbayes"; version="1.1-1"; sha256="0lfjfkvswnw3mqcjsamxnl8hpvz08rba05xcg0r47h5vkgpw5lgd"; depends=[]; }; event = derive2 { name="event"; version="1.1.1"; sha256="0w3v8j61y7vr0cjl8a1rkvi4pyjlfhmzzn1n4dgkivac4iafzqjj"; depends=[rmutil]; }; @@ -8117,35 +8437,37 @@ in with self; { exCon = derive2 { name="exCon"; version="0.2.5"; sha256="0gqnv01dw4ncf3x3p74pc6f14a1ixq7icl2p18hsmvxdqqg7kgy7"; depends=[jsonlite]; }; exact2x2 = derive2 { name="exact2x2"; version="1.6.5"; sha256="05xkzyyk1dfxq2f6aczwiyinznaxfd6ipd680zsbcd0iq44n7wd1"; depends=[exactci ssanv]; }; exactLoglinTest = derive2 { name="exactLoglinTest"; version="1.4.2"; sha256="0j146ih9szzks9r45vq1jf47hrwjq081q1nsja5h1gpllks8217h"; depends=[]; }; - exactRankTests = derive2 { name="exactRankTests"; version="0.8-31"; sha256="1154dkcid3njhamdp87qs9bnx7l8bdqkcjsds9q9f2xmizs9x8gw"; depends=[]; }; + exactRankTests = derive2 { name="exactRankTests"; version="0.8-32"; sha256="0p7h7w470p5qpsbrhw12zlsshyai56za5dsdva8cf9sikn0955qr"; depends=[]; }; exactci = derive2 { name="exactci"; version="1.3-3"; sha256="03r35f6dyrck5pf43ypb1sjwfnvkhjkm1mbms3wh67ayfs2ypn0s"; depends=[ssanv]; }; - exactextractr = derive2 { name="exactextractr"; version="0.5.1"; sha256="0vb142gwh6ry0nmd6bnipv2dfy3rcmfp871vw1bnks22kr5zppa7"; depends=[raster Rcpp sf]; }; + exactextractr = derive2 { name="exactextractr"; version="0.6.0"; sha256="1jawvpwqqgdc9cnsqxzcmhz7hwnq0m7pfa2ii3dghhyj080b3p85"; depends=[raster Rcpp sf]; }; exactmeta = derive2 { name="exactmeta"; version="1.0-2"; sha256="1v807ns799qajffky4k18iah0s3qh2ava6sz5i85hwx9dhkz19h4"; depends=[]; }; - exampletestr = derive2 { name="exampletestr"; version="1.6.2"; sha256="0mzxllh73lzqmkvv7ib8j472k4ppi3kw8flmzha5jw92dn9yql8p"; depends=[checkmate fs magrittr ore purrr readr rlang roxygen2 rstudioapi strex stringr styler usethis withr]; }; + exampletestr = derive2 { name="exampletestr"; version="1.6.3"; sha256="1higacpv57491vwm5b601s0w1279lvs1h5qyri4l8c92hr15n0pr"; depends=[checkmate fs magrittr ore purrr readr rlang roxygen2 rstudioapi strex stringr styler usethis withr]; }; exams = derive2 { name="exams"; version="2.3-6"; sha256="1cn0gmaayv857zl7l7zmnblmpx84qkjxqrigrymy578y04qjc4zx"; depends=[]; }; - exams_mylearn = derive2 { name="exams.mylearn"; version="1.2"; sha256="1vc2rqabavxfrr18ifjjd9am646rvbhxcjrkiq71i0y2idpppg9y"; depends=[exams glue stringi stringr xml2]; }; + exams_mylearn = derive2 { name="exams.mylearn"; version="1.4"; sha256="0cswbynd1acrvdwhgg3vlgl80v0qk22kg2hacbc6y08s4367srly"; depends=[exams glue pkgbuild stringi stringr xml2]; }; + exams2sakai = derive2 { name="exams2sakai"; version="0.3"; sha256="0lgnk2g4q0vbkvcrhb815lah24rhaknnmsbhhkgbdkl0c5mx1yjg"; depends=[exams glue stringi stringr xml2]; }; exceedProb = derive2 { name="exceedProb"; version="0.0.1"; sha256="02pb8b0rxygbv6501rcr2hb0bhz1r78k5znav161kk25fb9bxs5v"; depends=[BH Rcpp]; }; excelR = derive2 { name="excelR"; version="0.4.0"; sha256="1pb4sy54zjv5vrh7gjjv7qlpab74km6mfsmfyl0yhmr0jx01hrw0"; depends=[htmlwidgets jsonlite]; }; + excelstrippr = derive2 { name="excelstrippr"; version="0.1.2"; sha256="1ly76qja9b5l3xwfhigm1apd114y2iq5wdl27sd2h1y80n8xxf2v"; depends=[dplyr readxl tidyr]; }; excerptr = derive2 { name="excerptr"; version="2.0.0"; sha256="1xglpg9i45dd103ahj46lin42x9c8lgff2b5c4k3799gaki9sjzz"; depends=[checkmate reticulate]; }; - excursions = derive2 { name="excursions"; version="2.4.5"; sha256="13as2zwwa1fbbcrdda10v1lbkkj9mazyhrzckndfbvpnskm10wb6"; depends=[Matrix sp]; }; + excursions = derive2 { name="excursions"; version="2.5.1"; sha256="1ipij6i7f7qdzhgz5s5kymb43zvvfhdpd7ybyvljlkqyla15cwnx"; depends=[Matrix sp withr]; }; exdex = derive2 { name="exdex"; version="1.0.1"; sha256="15wdi24fq8q4ja4527k1adv6lkzyhylp8nwlsrb91q0sbmmprrqs"; depends=[chandwich Rcpp RcppArmadillo RcppRoll]; }; exif = derive2 { name="exif"; version="0.1.0"; sha256="12phqn5x1x0xs2xczl3064q983dalm261vqpyafhdcndm1y3gwbc"; depends=[Rcpp]; }; - exifr = derive2 { name="exifr"; version="0.3.1"; sha256="0394f04wq5dnqbnbaq7gxv4ggis4kf3b8dhhjzlybsbip6nmv54x"; depends=[curl jsonlite plyr rappdirs tibble]; }; + exifr = derive2 { name="exifr"; version="0.3.2"; sha256="0iqm513h7951q3hg8maf2hbprqmsm93cb3mbg3g91qawpx77494c"; depends=[curl jsonlite plyr rappdirs tibble]; }; exiftoolr = derive2 { name="exiftoolr"; version="0.1.5"; sha256="0amfv2avnyvlz8mhmzmklpqykshdxrcxivans6j9hnimj0ygw6ad"; depends=[curl data_table jsonlite zip]; }; exp2flux = derive2 { name="exp2flux"; version="0.1"; sha256="1b3ychb4wcf6dbccx2ddms5xygdgc296cnw4474fm81yrfjznplv"; depends=[gage igraph sybil]; }; expSBM = derive2 { name="expSBM"; version="1.3.5"; sha256="0k8nkwqrcmmhv0x8a2np1rm5cyc9glyvndwdbnp03v0wrg8121sw"; depends=[blockmodels gtools mclust Rcpp RcppArmadillo]; }; expandFunctions = derive2 { name="expandFunctions"; version="0.1.0"; sha256="0661l4ab0xhjidmh8ycvymhp3wgxafm7nd1c59bfpxhyhz76n1p4"; depends=[glmnet orthopolynom plyr polynom]; }; expands = derive2 { name="expands"; version="2.1.2"; sha256="15r5wld63kwk3kcl5x09dj0n1mgcl076lcjsmf0vbh10x4n0avrk"; depends=[ape commonsMath flexclust flexmix gplots matlab moments NbClust plyr RColorBrewer rJava]; }; - experDesign = derive2 { name="experDesign"; version="0.0.4"; sha256="1hdr0hj55lgzs88m26qijhh3sx8m1zv0lb10hhgwb00dmij5s3rh"; depends=[]; }; + experDesign = derive2 { name="experDesign"; version="0.1.0"; sha256="1v2j3jyxyzwkzc3y5n6pzd31yigkfwcmf12df3104m3kn86iq81r"; depends=[]; }; experiment = derive2 { name="experiment"; version="1.2.0"; sha256="0f8h4pj2y7cd2s1q44q4mrg9cirnpz0bkn4xm04hz1rpjxb4xlv1"; depends=[boot MASS]; }; expert = derive2 { name="expert"; version="1.0-0"; sha256="0y9vcigvzhymalpv31b9nvmr86z1dz7x29yj838vks0dsv23rgrf"; depends=[]; }; expint = derive2 { name="expint"; version="0.1-6"; sha256="0iai25cglcdnf44d2d1fz1xpw4q600my4zq4493fk4cs5673mlf7"; depends=[]; }; explor = derive2 { name="explor"; version="0.3.7"; sha256="0g3a1x3nf4m5pvc46j77jkqqm7z2radcswmy2kvspwj0l6dg6z04"; depends=[dplyr DT formatR ggplot2 highr RColorBrewer scatterD3 shiny tidyr]; }; - explore = derive2 { name="explore"; version="0.6.2"; sha256="0bn49pcidxsnypcb70j81by4lq0lypzbvb16qpkcxyiyfhapxakh"; depends=[assertthat broom DBI dplyr DT forcats ggplot2 gridExtra magrittr MASS odbc rlang rmarkdown rpart rpart_plot shiny stringr tibble tidyr]; }; + exploratory = derive2 { name="exploratory"; version="0.3.13"; sha256="164ykw514gfj185ckg3p8jfn7y5al12iab34fqyrkrqpj84gf1qd"; depends=[data_table DT ggplot2 ggridges lemon lm_beta mediation remotes shiny shinydashboard weights]; }; + explore = derive2 { name="explore"; version="0.7.0"; sha256="0iym10dk9ssczchlcv78n1dfpbapkmblskjy3sbaswwhvnchnskh"; depends=[assertthat broom DBI dplyr DT forcats ggplot2 gridExtra magrittr MASS odbc rlang rmarkdown rpart rpart_plot shiny stringr tibble tidyr]; }; exploreR = derive2 { name="exploreR"; version="0.1"; sha256="154j5wiiy9vqdvh1qvdkz2fdp2phcygbbjl7nj5nkn07xwxbsc77"; depends=[ggplot2]; }; - expm = derive2 { name="expm"; version="0.999-5"; sha256="0y98ya8rhy891nysjlzzy7kcm13dsz8gvxwzvbkmcp1xx0vicxc7"; depends=[Matrix]; }; + expm = derive2 { name="expm"; version="0.999-6"; sha256="1p5dapwv8ycxaysgi6imnby04i4kh1c5a2czqa4wygz0s8pr2y9c"; depends=[Matrix]; }; expose = derive2 { name="expose"; version="0.0.3"; sha256="0dlxlxm3g9d8vmgp13i1825z1jzah94ih1vyif46s43xq0nf9anj"; depends=[e1071 foreach gam ggplot2 glmnet Matrix nnet polspline RColorBrewer Rcpp repmis SuperLearner xgboost]; }; - expp = derive2 { name="expp"; version="1.2.4"; sha256="00r5f80wnz91n0ksp1dvrxpd6zyfis2v3rizsnm7qqnnwj3d4q1c"; depends=[deldir rgeos sp spatstat spdep]; }; expperm = derive2 { name="expperm"; version="1.6"; sha256="0cybna0q3qn3slyc4lv5rby4pr0xkwq0h6n7hl1zhsaqv4c2zc5b"; depends=[Rcpp]; }; expsmooth = derive2 { name="expsmooth"; version="2.3"; sha256="0alqg777g7zzbjbg86f00p2jzzlp4zyswpbif7ndd0zr8xis6zdc"; depends=[forecast]; }; expss = derive2 { name="expss"; version="0.10.7"; sha256="0br10ydhv7xz297nzz3qql3cvs1950g1szshywcnxnf58limsw1y"; depends=[data_table foreign htmlTable magrittr matrixStats]; }; @@ -8153,11 +8475,11 @@ in with self; { exreport = derive2 { name="exreport"; version="0.4.1"; sha256="0vj60rchhrc5q6x1kv7b95fcmh2a5qynli2w54rrrw1nx54xm8c2"; depends=[ggplot2 reshape2]; }; exsic = derive2 { name="exsic"; version="1.1.1"; sha256="1k6nqs9i4iivxnk4nkimp6zvdly274wibkmx9n0wz01gnzxqil0p"; depends=[markdown stringr]; }; extRC = derive2 { name="extRC"; version="1.2"; sha256="0mkvic9nr0asd0g04nlfiy81d7am9a3i65ibxyvbdwsxnf92p8ya"; depends=[MASS]; }; - extRatum = derive2 { name="extRatum"; version="1.0.0"; sha256="1ng27a2rl0yd41mbq70f0p1a2jg82n623b7hhdlnla3pd893ywk5"; depends=[dplyr sf tidyr]; }; + extRatum = derive2 { name="extRatum"; version="1.0.4"; sha256="1w4xfr7ps565xczmn6pr7g4551rj28df1j0y9vckvxdbb4dk1p11"; depends=[dplyr sf tidyr]; }; extRemes = derive2 { name="extRemes"; version="2.1"; sha256="1b69r3mzl6hp3g3rqxyc77m8r40jyq7c2d87q85af7xqkn6hnxid"; depends=[distillery Lmoments]; }; extWeibQuant = derive2 { name="extWeibQuant"; version="1.1"; sha256="08dzw5xfgqx0c7ac632c5mg5jmjjw7wwpcr4c9lvz5rv72ykh2rh"; depends=[]; }; extdplyr = derive2 { name="extdplyr"; version="0.1.5"; sha256="1zbnp0h0lv1dr40dhdw6ii8rmc5lxcq4wjsm83xpd3y8x9xpglnl"; depends=[dplyr lazyeval tidyr]; }; - extendedFamily = derive2 { name="extendedFamily"; version="0.1.1"; sha256="02cl7i3hvk9r5aq0ahj59lghmlbh28avh4fama9ixhz5zb95l3w1"; depends=[assertthat]; }; + extendedFamily = derive2 { name="extendedFamily"; version="0.2.0"; sha256="0dw5q4j9sxhsjvrwnbgf72hir6hj22p8fcqdc972d7hx04li7j02"; depends=[assertthat numDeriv]; }; exteriorMatch = derive2 { name="exteriorMatch"; version="1.0.0"; sha256="0cdfj1n502iws1g03rk7x0c18zyazqf3vci9kjm6lrv4j2qwrvip"; depends=[]; }; extfunnel = derive2 { name="extfunnel"; version="1.3"; sha256="162w5b2wjs3yqy8jisamsapav6swa8sskf1b6x5hglnrv3i4qyyy"; depends=[rmeta]; }; extlasso = derive2 { name="extlasso"; version="0.2"; sha256="05774y0i01lrbyws6zx5ymhcglllv1wc7gzrnyx8i5d1lxdinsyd"; depends=[]; }; @@ -8176,7 +8498,7 @@ in with self; { extremis = derive2 { name="extremis"; version="1.2"; sha256="1gvizxv1ay788a21qjslrmi7qdbr8s2ryibyri6sp7xdkaqiixsn"; depends=[emplik evd MASS]; }; extremogram = derive2 { name="extremogram"; version="1.0.2"; sha256="13k869v6j4ik9p8w0gf1absvb45xbd3nnwghsz0ix7y0vyvry358"; depends=[boot MASS]; }; exuber = derive2 { name="exuber"; version="0.4.2"; sha256="1kd06x4j9aibmf1arh652rcvdyhz4p0p3j1l241j78z7jrk417cj"; depends=[cli doRNG doSNOW dplyr foreach generics ggplot2 glue lubridate progress purrr Rcpp RcppArmadillo rlang tibble tidyr vctrs]; }; - eye = derive2 { name="eye"; version="0.1.0"; sha256="08kvjbr6lmhawd8zxipyz0js4r6mnbknr8cgz6951d8zynfg0426"; depends=[cli dplyr english lubridate magrittr purrr rlang stringr tibble tidyr tidyselect]; }; + eye = derive2 { name="eye"; version="1.2.0"; sha256="18v3msqn5max39pxh56npzfg0a3kbfln0bfqdxk86jmjvh77mrk5"; depends=[cli dplyr english lubridate magrittr pillar purrr rlang stringr tibble tidyr tidyselect]; }; eyeRead = derive2 { name="eyeRead"; version="0.0.4"; sha256="0f6knzr4fdipbrvcsk0q9yjvkjjyc4wc252lq2s41gdvj3hv575d"; depends=[data_table tibble tidyr]; }; eyeTrackR = derive2 { name="eyeTrackR"; version="1.0.1"; sha256="14m7l8v0ry1ami1jl0xjp743m1ycklgfwi06vk5amppdp5w3w3qr"; depends=[data_table plyr stringr]; }; eyedata = derive2 { name="eyedata"; version="0.1.0"; sha256="1xnll3x1sm0rv6hq2w22wa9n5qm8r827m7sr3dj54xb1i8j75gj3"; depends=[dplyr]; }; @@ -8185,7 +8507,7 @@ in with self; { ez = derive2 { name="ez"; version="4.4-0"; sha256="0a58s94x576dfz7wcbivrr2hmdh5x1vy16zwkqp9fmdzqx38pagq"; depends=[car ggplot2 lme4 MASS Matrix mgcv plyr reshape2 scales stringr]; }; ezCutoffs = derive2 { name="ezCutoffs"; version="1.0.1"; sha256="04ah9dbfwl89xi0di0dslaf8a39nynxymm8lbacgd88al5dg7y1n"; depends=[doSNOW foreach ggplot2 lavaan moments progress]; }; ezEDA = derive2 { name="ezEDA"; version="0.1.0"; sha256="1qxifszjfjm1smvl9igpjjjfncb690mim3bwfak5wp0yzjxcrvab"; depends=[dplyr GGally ggplot2 magrittr purrr rlang scales tidyr]; }; - ezcox = derive2 { name="ezcox"; version="0.8.0"; sha256="0zk6pq9b1jdgjjknhpynap7cnigimvpzgi8hdx79v39h334bmwfp"; depends=[dplyr forestmodel ggplot2 magrittr purrr rlang survival]; }; + ezcox = derive2 { name="ezcox"; version="0.8.1"; sha256="1l8flbzcs8j4k1hmhzp9dxjwxm65fciz5wxx6wvbnzk9yja5gd44"; depends=[dplyr forestmodel ggplot2 magrittr purrr rlang survival]; }; ezec = derive2 { name="ezec"; version="1.0.1"; sha256="0lpx55a8fhy6fqdv3zvzx9mh75q34r71v5kp96hkm9jzl4yvrpd2"; depends=[dplyr drc]; }; ezglm = derive2 { name="ezglm"; version="1.0"; sha256="0x7ffk3ipzbdr9ddqzv0skmpj5zwazkabibhs74faxnld7pcxhps"; depends=[]; }; ezknitr = derive2 { name="ezknitr"; version="0.6"; sha256="060a2175zh1nhzmqgz1mpj2c6721n5w5bv695jj4rbl2s2b2h4qj"; depends=[knitr markdown R_utils]; }; @@ -8206,6 +8528,7 @@ in with self; { fExpressCertificates = derive2 { name="fExpressCertificates"; version="1.3"; sha256="0dcfwl0ib87p748hvwscm5ii9fhfarqfl3zqxa8kin2n0hrvkdb6"; depends=[fCertificates fExoticOptions fOptions Matrix mvtnorm tmvtnorm]; }; fExtremes = derive2 { name="fExtremes"; version="3042.82"; sha256="1n0afql4csgsqf7j9x2v8yxncvpknms643l9knm0fqb4pdbaw58c"; depends=[fBasics fGarch timeDate timeSeries]; }; fGarch = derive2 { name="fGarch"; version="3042.83.2"; sha256="06c6f07bg05cbn7s40ak6ywyja4cfbznazj5my9rcyahjvc6b553"; depends=[fastICA fBasics Matrix timeDate timeSeries]; }; + fHMM = derive2 { name="fHMM"; version="0.2.0"; sha256="0jwcdwkkry5fb7swpj20vr08a77svgshkrinsj0xv5sqccqfkp2d"; depends=[MASS progress Rcpp RcppArmadillo tseries]; }; fICA = derive2 { name="fICA"; version="1.1-1"; sha256="0bnvhpr5w84bb8147gx5jwpz762b462nddgagv9ylhra3wxp44mz"; depends=[JADE Rcpp RcppArmadillo]; }; fImport = derive2 { name="fImport"; version="3042.85"; sha256="0rm4mwhk5ial016vl6dny8s87gd5i9p04akdyg2fndpcqwfmb5lc"; depends=[timeDate timeSeries]; }; fMultivar = derive2 { name="fMultivar"; version="3042.80.1"; sha256="0v61sf9x54ymka9x15vz38afj1lxmgfpcwrr73lzhccf6ci6fx9m"; depends=[cubature fBasics mvtnorm sn timeDate timeSeries]; }; @@ -8214,14 +8537,16 @@ in with self; { fPortfolio = derive2 { name="fPortfolio"; version="3042.83.1"; sha256="1knyrjgfzwf4ppvnb5n325p5f6sidr6q53ss0zw8binhj22gli4y"; depends=[fAssets fBasics fCopulae kernlab MASS quadprog Rglpk rneos robustbase Rsolnp slam timeDate timeSeries]; }; fRLR = derive2 { name="fRLR"; version="1.1"; sha256="005bmljxgvx8v87nz4l3ycg09sahyd34pg8arjz5gdc17d4mjjfc"; depends=[Rcpp]; }; fRegression = derive2 { name="fRegression"; version="3042.82"; sha256="0pi777xfk101g0r2qpcd0qxqqfnvck3sii990d946ljw6366mamc"; depends=[fBasics lmtest mgcv nnet polspline timeDate timeSeries]; }; + fSRM = derive2 { name="fSRM"; version="0.6.5"; sha256="0qp2pcq01vfgaczd57j4wmzvn4srzlwh7ya3sdp7vwzyb8dbjajn"; depends=[foreign ggplot2 gridExtra lavaan plyr reshape2 scales tcltk2]; }; fTrading = derive2 { name="fTrading"; version="3042.79"; sha256="0xnfg4npfdrvmp1n6vbsm7if16n5j83b7y1i2m5b34cqnlz9d69y"; depends=[fBasics timeDate timeSeries]; }; fUnitRoots = derive2 { name="fUnitRoots"; version="3042.79"; sha256="1hsv47dm0hx3s04g9h0bjdgi79zbfihnfxxdc2jskqp94yl7azsy"; depends=[fBasics timeDate timeSeries urca]; }; - fabCI = derive2 { name="fabCI"; version="0.1"; sha256="123bc56nnx6hcj257imsd8sc6d0pggw08lf4m0lr90631gcm1mkn"; depends=[]; }; + fabCI = derive2 { name="fabCI"; version="0.2"; sha256="1vga322xpqzsh40n74v8vqiq8zbzrabvg58mp50bcx2ml0dikgnm"; depends=[MASS]; }; fabMix = derive2 { name="fabMix"; version="5.0"; sha256="1gii3mdii9nw423xxn9mhv1pjbw967wdarn828w04zm9dkdcwm48"; depends=[coda corrplot doParallel foreach ggplot2 label_switching MASS mclust mvtnorm RColorBrewer Rcpp RcppArmadillo]; }; - fable = derive2 { name="fable"; version="0.2.1"; sha256="1gbzi0g71vdp5yp70msg4qxs45fp8wa2x4byfa8jw67v4gl4xx8y"; depends=[distributional dplyr fabletools Rcpp rlang tibble tidyr tsibble]; }; + fabisearch = derive2 { name="fabisearch"; version="0.0.2.4"; sha256="0r02wk1nkxv508ac57kqzcw5q569m9n3l9l98jr00h515ni0vjmg"; depends=[NMF reshape2 rgl]; }; + fable = derive2 { name="fable"; version="0.3.0"; sha256="0v22xgld7qqhn50w5n5f1hg3s8dx5y1mb0hn8sr4n3f6kr8izd9b"; depends=[distributional dplyr fabletools Rcpp rlang tibble tidyr tsibble]; }; fable_prophet = derive2 { name="fable.prophet"; version="0.1.0"; sha256="12y2k05plg6d6lgqk6617q6z5m6xz33zdsjh56k86h230qqw68rp"; depends=[distributional dplyr fabletools lubridate prophet Rcpp rlang tsibble]; }; - fabletools = derive2 { name="fabletools"; version="0.2.1"; sha256="014avk78nrihp83zqfwb73nrl3bgpa4rzzx9azp2h0jca8klyy4b"; depends=[distributional dplyr generics ggplot2 lifecycle progressr R6 rlang tibble tidyr tidyselect tsibble vctrs]; }; - fabricatr = derive2 { name="fabricatr"; version="0.10.0"; sha256="0kh2mfgyqz3fpilc4wycxj3vihhbdnjzsjrsp88nmsk0p5mjmljj"; depends=[rlang]; }; + fabletools = derive2 { name="fabletools"; version="0.3.1"; sha256="0r2ik8p89w8r76v9iliqng2ysf9cqqdcmq89ilr8ccilfq3pgbks"; depends=[distributional dplyr generics ggplot2 lifecycle progressr R6 rlang tibble tidyr tidyselect tsibble vctrs]; }; + fabricatr = derive2 { name="fabricatr"; version="0.14.0"; sha256="1smy9c34y47xdfmkgm90xyxagnj9qsgxg70mf75z1006m4npbdg8"; depends=[rlang]; }; fabricerin = derive2 { name="fabricerin"; version="0.1.2"; sha256="0ynvnxzxx1iybyy5pvwfsj5y9jjixyrpji9vcl5fq5mjnpg8mpqk"; depends=[glue htmltools]; }; face = derive2 { name="face"; version="0.1-5"; sha256="0n7vlq29krsdcp8r32irhvf7xbcxy5g7663qncmbhj5x45sviqh6"; depends=[Matrix matrixcalc mgcv]; }; facerec = derive2 { name="facerec"; version="0.1.0"; sha256="1dipcnxjz6yd34w0jrrvj5p0pwdgz1l5m9zvri7mflnz7g34gmaj"; depends=[dplyr httr jsonlite knitr magrittr rlang snakecase stringr]; }; @@ -8235,21 +8560,21 @@ in with self; { factorcpt = derive2 { name="factorcpt"; version="0.1.2"; sha256="17hwlsrj0fx4x05p6xvs6kl43a24icmnrzyvpf2vam5imwvmpvmm"; depends=[doParallel fields foreach iterators Rcpp RcppArmadillo]; }; factorial2x2 = derive2 { name="factorial2x2"; version="0.2.0"; sha256="045887hwknwm92wlrp0jlvxj5aal50vpnc7ddbh7c8smawmrdwfd"; depends=[mvtnorm survival]; }; factorplot = derive2 { name="factorplot"; version="1.1-2"; sha256="025lfk122w66yxym3njcpzwnbhg40xi7p1c9vnxczcb8kz31745s"; depends=[multcomp nnet]; }; - factorstochvol = derive2 { name="factorstochvol"; version="0.10.1"; sha256="1cd2dw26bvgy0qxbva5hmpxki6qxql71bgir58yjgp7fjzfbw0b7"; depends=[corrplot GIGrvg Rcpp RcppArmadillo stochvol]; }; + factorstochvol = derive2 { name="factorstochvol"; version="0.10.2"; sha256="155vnlsncykazg5ll1sdsk6y3342qvyhfxw7mxnhgc134ngqcn8m"; depends=[corrplot GIGrvg Rcpp RcppArmadillo stochvol]; }; factory = derive2 { name="factory"; version="0.1.0"; sha256="1715bx2rn8kk5qd196jnrv5f95l54n4y0aqqdzfkgrmqihcy8ahx"; depends=[purrr rlang]; }; factset_analyticsapi_engines = derive2 { name="factset.analyticsapi.engines"; version="3.0.1"; sha256="0v96z837dii1q7mbpd48zwpl2qjzqnhignb80g0xkc4iygsnrrms"; depends=[caTools httr jsonlite R6 rlang]; }; factset_protobuf_stach = derive2 { name="factset.protobuf.stach"; version="1.0.2"; sha256="0qdvgq0w58pb0bn4x5v25i8pvij3lc8l9x9bj68s9zb29ankl3ss"; depends=[R6 RProtoBuf]; }; factualR = derive2 { name="factualR"; version="0.5"; sha256="1wz8ibcmilcx62yy29nd2i1pdmjf7fm0g9i5s58gdn8cjlhnw1jl"; depends=[RCurl RJSONIO]; }; - fad = derive2 { name="fad"; version="0.2-1"; sha256="09lbakil37fyji3bwydspzvrnwm0992x8783zyyv2jk37y0wr1ip"; depends=[Matrix Rcpp RSpectra]; }; + fad = derive2 { name="fad"; version="0.3-3"; sha256="1xii15lcfb72jmwgqfb4x0h0xs7cxj1hzx8289sq1ibakiwkkv5l"; depends=[Matrix Rcpp RcppEigen RSpectra]; }; fail = derive2 { name="fail"; version="1.3"; sha256="0vfm6kmpmgsamda5p0sl771kbnsscan31l2chzssyw93kwmams7d"; depends=[BBmisc checkmate]; }; fairadapt = derive2 { name="fairadapt"; version="0.1.0"; sha256="01ing7mm1asfgh4w8cc7f7fpv13lja97vv5skk5bri00zycwcqfd"; depends=[ranger]; }; - fairml = derive2 { name="fairml"; version="0.3"; sha256="0513x52caw6sa3jizi66fhfksdigla72bxj45jakyai2xgvwq28b"; depends=[optiSolve]; }; - fairmodels = derive2 { name="fairmodels"; version="0.2.4"; sha256="0zqflf2zmpg9nx2lvigdr3vy62sxxmif3d6h7r0iqzhf9i1ix8wq"; depends=[DALEX ggdendro ggplot2 ggrepel patchwork scales]; }; - fairness = derive2 { name="fairness"; version="1.2.0"; sha256="12inr7jhlc6rvfa2klzbgi5a1ch5cdqsa93kzdcjrijw8y1pfpzn"; depends=[caret devtools e1071 ggplot2 pROC]; }; + fairml = derive2 { name="fairml"; version="0.4"; sha256="04bx34vgafc43hw9f0n0qg924c3y8ik0crh7k1fqyanff393b5qb"; depends=[glmnet optiSolve]; }; + fairmodels = derive2 { name="fairmodels"; version="1.0.1"; sha256="13w459b71vwkgl1sbhgflb2s26qqbkzbar1msxabmb36l28la120"; depends=[DALEX ggdendro ggplot2 ggrepel patchwork scales]; }; + fairness = derive2 { name="fairness"; version="1.2.2"; sha256="12jf2p8gmj5d6r9h9cwy208qwyqi606b54v0d99vpr171yijqvqk"; depends=[caret devtools e1071 ggplot2 pROC]; }; fairsubset = derive2 { name="fairsubset"; version="1.0"; sha256="0iw16fs2mb9p14vr34izw3sirbndyy8w07df3scy7gkkcx2nz2bz"; depends=[matrixStats]; }; faisalconjoint = derive2 { name="faisalconjoint"; version="1.15"; sha256="08sb4za8qyadvigq2z7b0r44qk2lpahpnz9nv16xfjb1zhdkz5w3"; depends=[]; }; fakeR = derive2 { name="fakeR"; version="1.0"; sha256="0f4ngnd8s34j1327zp3aqnsiw0gfxkp1i24ng20hrmfl13s1qmxp"; depends=[mvtnorm polycor pscl VGAM]; }; - fakemake = derive2 { name="fakemake"; version="1.9.0"; sha256="0lwh9zb7jh10p30r0ajhvgh7a1airfw6kxn54620xc1b71f4116q"; depends=[igraph MakefileR]; }; + fakemake = derive2 { name="fakemake"; version="1.10.1"; sha256="1wpslll9gr3q50410ydfg10s0xp06j69xhj88gw7fsvdnqgs9h3l"; depends=[fritools igraph MakefileR]; }; falcon = derive2 { name="falcon"; version="0.2"; sha256="09hlvwwj3k3nhcsxijjvv8x74a9m200ayjjplrp4baxvczwyq341"; depends=[]; }; falconx = derive2 { name="falconx"; version="0.2"; sha256="0648mvbc7ga7vr2xqzyln3dgd11h5s4bqhv3p55mj7smr4qv7hv9"; depends=[]; }; fam_recrisk = derive2 { name="fam.recrisk"; version="0.1"; sha256="1lyrq7bq7p7ijc2vf545nazw4akncz08548ya1dv3lsc5jmkgfzj"; depends=[]; }; @@ -8260,14 +8585,14 @@ in with self; { fancycut = derive2 { name="fancycut"; version="0.1.2"; sha256="1xg5qjxf77g10h07x6rvb8c3klc9gbr77bkw352qpas268pkswl2"; depends=[]; }; fanovaGraph = derive2 { name="fanovaGraph"; version="1.5"; sha256="1hffda52yk24slbgsfdgkpg3vsryfnhlw09r39cbyz483i7xd8d0"; depends=[DiceKriging igraph sensitivity]; }; fanplot = derive2 { name="fanplot"; version="3.4.2"; sha256="169n9ghm4x6fhd97xz1mqjj0f5hldjkrp926iqk2qqanchnhfvh6"; depends=[]; }; - fansi = derive2 { name="fansi"; version="0.4.1"; sha256="028ywjy538psnmdnddvy5jr3idzffr4hikzr4x97x0m30g4fws9w"; depends=[]; }; - faoutlier = derive2 { name="faoutlier"; version="0.7.4"; sha256="07nnnyj0j5g72a0sa3v7hrnx900i8a1yhlp0wmiwabskikz36iw7"; depends=[lattice lavaan MASS mirt mvtnorm pbapply sem]; }; - faq = derive2 { name="faq"; version="0.1.0"; sha256="1ha4y5kj60mv10v7lq21f2py8vjcjcnn7h6vbcaa1kg574vlqsd0"; depends=[htmlwidgets jsonlite]; }; + fansi = derive2 { name="fansi"; version="0.4.2"; sha256="0i7wmaflkjzdbggqv31wnsj3m9imvc6db429vyjk64xrz1ng1vd2"; depends=[]; }; + faoutlier = derive2 { name="faoutlier"; version="0.7.6"; sha256="0dd8k5s0yv047p10jisqz13nflby4y0dg97r0nbjygzcq1ryx2bs"; depends=[lattice lavaan MASS mirt mvtnorm pbapply sem]; }; + faq = derive2 { name="faq"; version="0.1.1"; sha256="0knajqm9ydsjhn6xymfrcyf2b1kgfbiai8ai2zlm7p4mgfry504h"; depends=[htmlwidgets jsonlite]; }; far = derive2 { name="far"; version="0.6-5"; sha256="18lj2mgnn9s59ypkr19zzv0sffwpx9mgk975xmpvw4kkl84dykis"; depends=[nlme]; }; faraway = derive2 { name="faraway"; version="1.0.7"; sha256="0lalf52y9rb4zdb4kpscwddb4zy0af7r5sm7lx8s9jaqykrwrfq6"; depends=[lme4 nlme]; }; farff = derive2 { name="farff"; version="1.1"; sha256="0d3d343jjjwsb132ph12h3r044j3bc4jp94ayikjyq1lmwwsfr4k"; depends=[BBmisc checkmate readr stringi]; }; farrell = derive2 { name="farrell"; version="0.2.1"; sha256="0i546w5p40j9wqiq7qvbxw0426msavbdpnh258jcg6bagc6bywh8"; depends=[Benchmarking data_table dplyr DT magrittr miniUI readr rlang shiny shinycssloaders shinyWidgets tibble]; }; - farver = derive2 { name="farver"; version="2.0.3"; sha256="1k75v07dsfkjra2gsgxg9s55cw3b46b1nh960kqphq7cg7gr058f"; depends=[]; }; + farver = derive2 { name="farver"; version="2.1.0"; sha256="1x6ffwxqbrwlylnk995jz2a6nz2y9z59jaq0ncpni7q40w367j75"; depends=[]; }; fasjem = derive2 { name="fasjem"; version="1.1.2"; sha256="1bbrcyyg96hakgla3604byrkn9034197vy2is048kdq20yr2y11n"; depends=[igraph]; }; fasstr = derive2 { name="fasstr"; version="0.3.2"; sha256="0krd6h9vz4y3kzz13w2lq5b59v6ajr61ngcpnnk71ijn7hhmaanh"; depends=[dplyr e1071 fitdistrplus ggplot2 lubridate openxlsx PearsonDS plyr purrr RcppRoll scales tidyhydat tidyr zyp]; }; fastAdaboost = derive2 { name="fastAdaboost"; version="1.0.0"; sha256="1pv1y6znvc37pgwk99v4r0hljhipq8v6r3r5cb5vhgyl0bfi8g38"; depends=[Rcpp rpart]; }; @@ -8281,11 +8606,12 @@ in with self; { fastM = derive2 { name="fastM"; version="0.0-4"; sha256="1n9a431w0hl4kr3pa32kcyd1d73acz4vb9vhfkckk3099mg46d9m"; depends=[Rcpp RcppArmadillo]; }; fastNaiveBayes = derive2 { name="fastNaiveBayes"; version="2.2.1"; sha256="04hv4jdhan1vbsixzbifa7hpmc531gv7c2dd1fx5700c2wlkja1n"; depends=[Matrix]; }; fastR2 = derive2 { name="fastR2"; version="1.2.1"; sha256="15mqsdy79zvd4srrszdjp0kh9lfcq3yxp7j5d4xcqbjbwsgy68il"; depends=[dplyr ggplot2 lattice maxLik miscTools mosaic numDeriv]; }; + fastRG = derive2 { name="fastRG"; version="0.3.0"; sha256="1qxbdgn9id9dhavlwf242cr9pk7pwaj93cvv00jaidiq6rlslnq8"; depends=[ellipsis glue igraph magrittr Matrix RSpectra tibble tidygraph]; }; fastSOM = derive2 { name="fastSOM"; version="1.0.1"; sha256="1fzy7lfx1fn9993h0qh6vbwq0w4gfgbdrprmzb1z3aqq6nqvmngm"; depends=[]; }; fastStat = derive2 { name="fastStat"; version="1.4"; sha256="1sgk41v07rjh6dq52mxbiryjcwmyl71cmm51r8gwf8k14zgl500s"; depends=[car do e1071 ggplot2 ggrepel plyr PredictABEL reshape2 set survC1 survIDINRI survival tseries]; }; fastTextR = derive2 { name="fastTextR"; version="2.0.0"; sha256="1ggmwsw2qnq8v3s8iaxi8q66c898pc15wfgpsp6h0mc761qih5lf"; depends=[Rcpp slam]; }; fasta = derive2 { name="fasta"; version="0.1.0"; sha256="0wnppxn3039dj58xm0b66fsyq537bk8k8m56im11xj1iwc3zc6vw"; depends=[]; }; - fastai = derive2 { name="fastai"; version="2.0.2"; sha256="0m6wj2zdc1gjyf6dqpmci2yn0ps2gzx65dk02cb9qr8yzcc7bdgk"; depends=[generics ggplot2 ggpubr glue png reticulate]; }; + fastai = derive2 { name="fastai"; version="2.0.7"; sha256="0jd6q140hrxk0c0k4flm38b1q33n1mrwc24mgn5xpn83bpk8d0wm"; depends=[generics ggplot2 ggpubr glue png reticulate]; }; fastclime = derive2 { name="fastclime"; version="1.4.1"; sha256="0zcir8r11b2hxr9vvkmvxlzmhfcaxbr0wbjy86ysr912mp8fs9i3"; depends=[igraph lattice MASS Matrix]; }; fastcluster = derive2 { name="fastcluster"; version="1.1.25"; sha256="01a2xnhhvv1swd4g8p4lzyn7ww7kg49jlnzc7kfz60jqjzpisrpk"; depends=[]; }; fastcmh = derive2 { name="fastcmh"; version="0.2.7"; sha256="0hib3r3pkfdi67bdy4pf1pw6869vq4b3pg1pq1zwpyy76nbnq9vl"; depends=[bindata Rcpp]; }; @@ -8296,38 +8622,42 @@ in with self; { fasteraster = derive2 { name="fasteraster"; version="1.1.1"; sha256="1ycr2h046jds2758xvxn00rhglx3zarbzn3r38j66j5pnz2iiq4f"; depends=[Rcpp]; }; fasterize = derive2 { name="fasterize"; version="1.0.3"; sha256="10bzl77c1b9jhcn1xp467qzp2n8c7s3wpxn53qjh1nwvbri5kd32"; depends=[raster Rcpp RcppArmadillo sp]; }; fastglm = derive2 { name="fastglm"; version="0.0.1"; sha256="1vqw02j4y28mngki87r42f1mhlkvajqp2gpbvk0l2adrkz70l0bn"; depends=[Rcpp RcppEigen]; }; + fastkmedoids = derive2 { name="fastkmedoids"; version="1.2"; sha256="1z98ndxhq2ag870g0xqkw04b4k722994vh0pq46bw8bqc9v7bpkk"; depends=[Rcpp]; }; fastlogitME = derive2 { name="fastlogitME"; version="0.1.0"; sha256="1wpbcjb3ncxl904492alikslnqg53zgx6psxx7qllspd43s8ymv7"; depends=[]; }; fastlogranktest = derive2 { name="fastlogranktest"; version="0.2.1"; sha256="1j5mgvi3nwnlarj31cknx2cikypql370qds2h0877vmm80942z25"; depends=[BH Rcpp]; }; fastmaRching = derive2 { name="fastmaRching"; version="1.1.0"; sha256="085xr5i6h6vwl1flzbkwqsm8d815s0p02p0mir60jqjvy0s7haip"; depends=[raster rgdal sp]; }; - fastmap = derive2 { name="fastmap"; version="1.0.1"; sha256="1v7sp56xiha0bh78g3w92k52p9vkp7ryzpw0z66nyddxzrfv0y27"; depends=[]; }; + fastmap = derive2 { name="fastmap"; version="1.1.0"; sha256="0aw29hnq3ppn7bsnwg9d9sp84k1cvq30lrmfzqn315n0nhkfa4wi"; depends=[]; }; fastmatch = derive2 { name="fastmatch"; version="1.1-0"; sha256="0z80jxkygmzn11sq0c2iz357s9bpki548lg926g85gldhfj1md90"; depends=[]; }; - fastmatrix = derive2 { name="fastmatrix"; version="0.3"; sha256="08bw3qrsdfb5y9x44rxi6kzmagaz4k9f08svdxgxnad1aja7hbnr"; depends=[]; }; + fastmatrix = derive2 { name="fastmatrix"; version="0.3-81"; sha256="0gcnssxfxhj8pvv5ydaszing3bm1cjhajzr28j7xsf8qndgs9kkw"; depends=[]; }; fastmit = derive2 { name="fastmit"; version="0.1.1"; sha256="13hczsfbzssd272kpbq8l2l64lqrkmi2j6f3xyp9jvvxdd506kq0"; depends=[Rcpp RcppArmadillo]; }; fastnet = derive2 { name="fastnet"; version="1.0.0"; sha256="1c07msypxj8ilpa1il9jjbgylwpdxv8j8gak362xdmbm4b1bwlm6"; depends=[doParallel foreach igraph tidygraph]; }; fastpos = derive2 { name="fastpos"; version="0.4.1"; sha256="0h6drzzc3f1dc5ydi5x9c7wday18sgzi8zn4pf5wxlzsc4qj0pzf"; depends=[future MASS plyr Rcpp RcppArmadillo RcppProgress]; }; fastpseudo = derive2 { name="fastpseudo"; version="0.1"; sha256="0paag4pjh3gs270j663bsl65sfrq43gk2zzqmalr03fmcckp6aaj"; depends=[]; }; fastqcr = derive2 { name="fastqcr"; version="0.1.2"; sha256="12x3lkg5zc4ckyg4x3xxqb779yhrr0fys7asf5b8shz49f86fmm9"; depends=[dplyr ggplot2 gridExtra magrittr readr rmarkdown rvest scales tibble tidyr xml2]; }; + fastrmodels = derive2 { name="fastrmodels"; version="1.0.2"; sha256="1333546nk429l6s4icbmx8hmh29wsc252wbmmhsmgb116l4ra9zi"; depends=[xgboost]; }; fastshap = derive2 { name="fastshap"; version="0.0.5"; sha256="08f25ib5mry6h8lvj0g3clc9kfl5g2wdd8x8bw455wwmbcm6x5vg"; depends=[abind ggplot2 gridExtra matrixStats plyr Rcpp RcppArmadillo tibble]; }; fasttime = derive2 { name="fasttime"; version="1.0-2"; sha256="11i4c0zrkvvqsax0az1fvmc0jxfsjyx28434k1qgzhj9g2j9m9cf"; depends=[]; }; fat2Lpoly = derive2 { name="fat2Lpoly"; version="1.2.4"; sha256="01a9d6b2f6g858vg64kr0w0qmv2jqhk9kk3hb6jdr2rly4j8p14x"; depends=[kinship2 multgee]; }; - faux = derive2 { name="faux"; version="0.0.1.5"; sha256="1fkl2zmsfqc5rjbfik94pywy6rbvmkwk192m8xbihmgirdwjg726"; depends=[dplyr ggplot2 jsonlite lme4 truncnorm]; }; + faux = derive2 { name="faux"; version="1.0.0"; sha256="0wfz48bv31fwqnz7bvpimsl7ydym76mkn5z2zx1yf55cl95z27n3"; depends=[dplyr ggplot2 jsonlite lme4 rlang truncnorm]; }; fauxnaif = derive2 { name="fauxnaif"; version="0.6.1"; sha256="1hw6lkxvxd65wajr0mpmbg8lvx0sd84py1apzqfnr7xpb4r1hi85"; depends=[glue lifecycle rlang]; }; fauxpas = derive2 { name="fauxpas"; version="0.5.0"; sha256="129fzqb7wsskbn50s8x0marr4wm8jrns6hiycqcsk166k3dnyyy8"; depends=[httpcode R6 whisker]; }; + faviconPlease = derive2 { name="faviconPlease"; version="0.1.1"; sha256="1si4s2cllia8hdlwdxjzbb2vi3n08dr76vm2mnsvqkvd3p9m60pr"; depends=[xml2]; }; favnums = derive2 { name="favnums"; version="1.0.0"; sha256="0siax7gjr25lpf1li3hawx6nviggs68c0lap2d9i38azlhvj891w"; depends=[]; }; fbRads = derive2 { name="fbRads"; version="0.2"; sha256="1a65gfvizzm6psspcvlhkxligdf9j1whrgzkg7ww520lk3z8lnnd"; depends=[bit64 data_table digest futile_logger jsonlite plyr RCurl]; }; fbRanks = derive2 { name="fbRanks"; version="2.0"; sha256="17kbmdpgqkj2n951c6mdsrgfga6kiij1gqiw1wpi0q3fq4dlfrzx"; depends=[igraph stringr]; }; fbar = derive2 { name="fbar"; version="0.6.0"; sha256="005725xiz6k868hrj12ryq3xlyin2r94n0yychimjzhfsppx2zba"; depends=[assertthat dplyr magrittr Matrix purrr rlang ROI ROI_plugin_ecos stringr tibble tidyr]; }; fbati = derive2 { name="fbati"; version="1.0-4"; sha256="0vqn73zcqgg89zkfgf0ika0s87f4gb6nxds1dmliiq36p28dhv2c"; depends=[fgui pbatR rootSolve]; }; fbroc = derive2 { name="fbroc"; version="0.4.1"; sha256="1v73wl3yckcqx43fz1lzcsy6v08vmbmi7yi623yhgqywixxv2bx3"; depends=[ggplot2 Rcpp]; }; - fbst = derive2 { name="fbst"; version="1.3"; sha256="13qc2mcjncw1iginyrlbzw0l7r426730apkwvh6yf0cqby1z9ad9"; depends=[bayestestR]; }; + fbst = derive2 { name="fbst"; version="1.5"; sha256="05dnnwbqsj1rjka8p3mjhzj5h11ac8cvqg51qc8fdssqx2ldcqdw"; depends=[bayestestR]; }; fc = derive2 { name="fc"; version="0.1.0"; sha256="0x41xfchy499kz0qi7fp12vpkbcddprv19mmk48lxzavv4f5avfh"; depends=[codetools]; }; fcaR = derive2 { name="fcaR"; version="1.0.7"; sha256="0hvwd8gpx7akci96c78cw8v4qlh46zabbcxv9bl5dlgp5spxppng"; depends=[fractional magrittr Matrix R6 Rcpp registry stringr tictoc tikzDevice]; }; + fcci = derive2 { name="fcci"; version="1.0.0"; sha256="1rz46dbh11i8ycxhdjhjqhb65f25qyb0ip7lgrcwkc6bidg7kc5d"; depends=[assertthat Rcpp rlang]; }; fcd = derive2 { name="fcd"; version="0.1"; sha256="091wbf5iskcgyr7jv58wrf590qijb0qcpninmvm3xrwxi34r37xr"; depends=[combinat glmnet MASS]; }; fclust = derive2 { name="fclust"; version="2.1.1"; sha256="11dsf7mb075m1m1ilqsacc0s4907wq6alvdfh6nizsyr01wiqw3b"; depends=[MASS Rcpp RcppArmadillo]; }; fcm = derive2 { name="fcm"; version="0.1.3"; sha256="1mqk6szczsixdvw0inkypij4cw2syng5l5ccw0xk55kc21l1lzn0"; depends=[ggplot2 reshape2]; }; fcr = derive2 { name="fcr"; version="1.0"; sha256="17jrz5zp1msd2khl1lwnb5sgxcigagni556rhn7qm9g0aykbh8yj"; depends=[face fields mgcv]; }; fcros = derive2 { name="fcros"; version="1.6.1"; sha256="04yr6lqs38lczsmdvdm78qn63836qj7xwspgh3h3n3gh8cssd83x"; depends=[]; }; - fctbases = derive2 { name="fctbases"; version="1.0.0"; sha256="01nwnlvaq7qna166d5s71p3pvx1gnlhpz0macwfqd8ryg6ccid7x"; depends=[Rcpp RcppArmadillo]; }; + fctbases = derive2 { name="fctbases"; version="1.1.0"; sha256="1jf6ngdph45l105cib13lghan7d68hsjqdr8wsjz2kls8il6kz9s"; depends=[Rcpp RcppArmadillo]; }; fcuk = derive2 { name="fcuk"; version="0.1.21"; sha256="1sb7p1m5qb88028mrw95lhh8l7dxj696hjh88nfsdpnscryknfpv"; depends=[magrittr purrr stringdist tibble]; }; fdANOVA = derive2 { name="fdANOVA"; version="0.1.2"; sha256="1pycq5a4czqzi8wcfmlc9ncg827j7n0qxyj90wcv39nbcrnl3da1"; depends=[doBy doParallel fda foreach ggplot2 magic MASS]; }; fda = derive2 { name="fda"; version="5.1.9"; sha256="0yjrjsv55bcwqn2yxjgj3hn17wfvjvgngfw9xv3w802i52yz9gf8"; depends=[fds Matrix]; }; @@ -8335,26 +8665,30 @@ in with self; { fdaACF = derive2 { name="fdaACF"; version="1.0.0"; sha256="0qrsj25p6h2xg25v0ayk8x31d4whyy0mpf2xdpw3hcwhb71mbfhn"; depends=[CompQuadForm fda pracma vars]; }; fdaMixed = derive2 { name="fdaMixed"; version="0.6"; sha256="0hyhb67qvvhyq68k5h4ffvsl4lmw66nfy5l14kwxnn42h3b810sc"; depends=[Formula Rcpp RcppArmadillo]; }; fdaPDE = derive2 { name="fdaPDE"; version="1.0-9"; sha256="06hm1f30rpy37xz9ybvhk759y10p8ijy7slnl9cvp4gqwzy2i8b7"; depends=[geometry Matrix plot3D plot3Drgl RcppEigen rgl]; }; + fdaPOIFD = derive2 { name="fdaPOIFD"; version="1.0.0"; sha256="11zlwp7xwdac4chk3f81idh5xz9lfqs3vx6qk56yb2lp8cjd7rad"; depends=[FastGP fdapace ggplot2 magrittr MASS patchwork reshape2 tibble]; }; fdadensity = derive2 { name="fdadensity"; version="0.1.2"; sha256="1i2xzchlsixgjzyfmbv547sy6mq90xrnyc2kpd11wwfgfrpj1ix3"; depends=[fdapace Rcpp]; }; fdakma = derive2 { name="fdakma"; version="1.2.1"; sha256="0j9qgblrl7v4586dd6v0hjicli6jh8pkk5lzn8afpl75xfs24six"; depends=[]; }; - fdaoutlier = derive2 { name="fdaoutlier"; version="0.1.1"; sha256="05n22xp2v90f73h1zdjb3fzw3gx6cw9x19lxcw8873xza43ywvg3"; depends=[MASS]; }; - fdapace = derive2 { name="fdapace"; version="0.5.5"; sha256="1icc4wxglqr7qyyv2bh94j9jzcf8l03a701y69703rq9pzylq91s"; depends=[Hmisc MASS Matrix numDeriv pracma Rcpp RcppEigen]; }; + fdaoutlier = derive2 { name="fdaoutlier"; version="0.2.0"; sha256="1jpd9mszd0grn7rwi3dmgl6l5dggwsnz1kyljz2gcfm2wck2zhbz"; depends=[MASS]; }; + fdapace = derive2 { name="fdapace"; version="0.5.6"; sha256="05xlxj1jy3hzlc6djwwv3j6999f867y4zy3cd6mf9gnzgr0pjbqx"; depends=[Hmisc MASS Matrix numDeriv pracma Rcpp RcppEigen]; }; fdasrvf = derive2 { name="fdasrvf"; version="1.9.4"; sha256="0psqxmznb2qimci2g8p0qy5fc5mal8gilwbmshlmb57ws71c3pkc"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo testthat tolerance viridisLite]; }; fdatest = derive2 { name="fdatest"; version="2.1"; sha256="0zdnmssir5jz2kbfz4f4xshjfv4pivqx7cbh2arlx6ypkjrjws8n"; depends=[fda]; }; fdcov = derive2 { name="fdcov"; version="1.1.0"; sha256="0savsgcifcjjqrmbpn6m30gncq5iigqxpb19l710wlx8nm98svjh"; depends=[corrplot matlab]; }; - fddm = derive2 { name="fddm"; version="0.2-2"; sha256="1kaqnk6z0f1m3sp2dfw1nl0wpdm0xj4grip62zaqwisi0vjk91w9"; depends=[Rcpp]; }; + fddm = derive2 { name="fddm"; version="0.3-3"; sha256="09fyk9h3gv10bp8xg45pmv0yr57vh1iq2hbadhlz946iqn7qmvpa"; depends=[Rcpp]; }; fdistr = derive2 { name="fdistr"; version="0.1.0"; sha256="1i9nq4jmszbmwk4m6jfn7rifsn7aay40cj6kz23b9ihj3phqffi8"; depends=[dplyr ggplot2 magrittr usethis]; }; - fdq = derive2 { name="fdq"; version="0.11"; sha256="1lzv1pmzjixp8wpap0w3lad1ns9z2hjbxkfpyp9jy9mxprj1w3q9"; depends=[data_table Fgmutils ggplot2 plyr randomcoloR sqldf]; }; + fdm2id = derive2 { name="fdm2id"; version="0.9.5"; sha256="0z4csd2bi0pavfaqvkidfdvri14miwh1v752m6f1h224j47krcq8"; depends=[arules car caret class cluster e1071 FactoMineR flexclust fpc glmnet ibr irr kohonen leaps MASS mclust mda meanShiftR nnet pls questionr randomForest ROCR rpart Rtsne SnowballC stopwords text2vec wordcloud xgboost]; }; + fdq = derive2 { name="fdq"; version="0.12"; sha256="198nsyzv0ni2mjx12wik58c7z5vrc1mfk80k3iv94dz1iq9fprqf"; depends=[data_table Fgmutils ggplot2 randomcoloR sqldf]; }; fdrDiscreteNull = derive2 { name="fdrDiscreteNull"; version="1.4"; sha256="1lwznpwfnhhv0h7qwy9jc7li752bq7hgmkh86qzyqz7k18zgx4iw"; depends=[MCMCpack qvalue]; }; fdrci = derive2 { name="fdrci"; version="2.1"; sha256="1sgrsmlz7sbr1maw3qnpzqz3z75fh5nyiibpsq8j0y12xac8d0x3"; depends=[]; }; - fdrtool = derive2 { name="fdrtool"; version="1.2.15"; sha256="1h46frlk7d9f4qx0bg6p55nrm9wwwz2sv6d1nz7061wdfsm69yb5"; depends=[]; }; + fdrtool = derive2 { name="fdrtool"; version="1.2.16"; sha256="1aap4k1l3a9m43374xq688mqnzkgqx8l021li262r3h1xr4adpp7"; depends=[]; }; fds = derive2 { name="fds"; version="1.8"; sha256="1284vncixrzrz9x6b52gslrbrbia07sd0xac7nwdqhp5f5v5wfi0"; depends=[rainbow RCurl]; }; fdth = derive2 { name="fdth"; version="1.2-5"; sha256="01phrn8x245kplljjajqlsma7847j058spbxajnklamywf002qzr"; depends=[xtable]; }; - feasts = derive2 { name="feasts"; version="0.1.6"; sha256="18d9x9arbzv8b6c38fw0snvklgyzh8qr26vhayf4kxd06j5bbd6n"; depends=[dplyr fabletools ggplot2 lifecycle lubridate rlang scales slider tibble tidyr tsibble vctrs]; }; + feamiR = derive2 { name="feamiR"; version="0.1.0"; sha256="0yp3bxh47aspfnnxi4wm4drkndv265rv58n9x9cp5jazwdy4qgg9"; depends=[dplyr e1071 GA ggplot2 magrittr randomForest reticulate rpart rpart_plot stringr tibble]; }; + feasts = derive2 { name="feasts"; version="0.2.1"; sha256="05ix5anp1swkcarx85pdn994fl3ngn9wkn3idpy69hgxcwzr3na4"; depends=[dplyr fabletools ggplot2 lifecycle lubridate rlang scales slider tibble tidyr tsibble vctrs]; }; feather = derive2 { name="feather"; version="0.3.5"; sha256="1gxd0h2m56sjjlzn4dry6s13nddxc4l5i11gsvavaf2dwbahdzsh"; depends=[hms Rcpp tibble]; }; - feature = derive2 { name="feature"; version="1.2.14"; sha256="1c12rny9nx8dynzxbcf49h76a7wlmsk1m131wh0jiyqx3c3y41y1"; depends=[ks]; }; + feature = derive2 { name="feature"; version="1.2.15"; sha256="0yzn1w1sasilcp8v0pcjnxjv9l6lspkskqi412i6h040gqmjjf6y"; depends=[ks plot3D]; }; featureCorMatrix = derive2 { name="featureCorMatrix"; version="0.4.0"; sha256="1gq3g351z3fbrx6ys28iymv9j07p2siav8jr3k07r06w314dk1q6"; depends=[]; }; featurefinder = derive2 { name="featurefinder"; version="1.1"; sha256="024g3adhxx1ynl9wnc2yl3illj4347ak6wkfmvqxfwd6llsa79ld"; depends=[plyr rpart rpart_plot]; }; + featureflag = derive2 { name="featureflag"; version="0.1.0"; sha256="1p14wbzcqfrn3f04k36039v9ac3ln1srq171g77havddrjx0g35p"; depends=[]; }; features = derive2 { name="features"; version="2015.12-1"; sha256="0rd8r1dxzddb6718hcm8ck7531c9wdrjfy8n67875bbxgzcvds61"; depends=[lokern]; }; featuretoolsR = derive2 { name="featuretoolsR"; version="0.4.4"; sha256="0zrb3hb9axcfqc1b5cyhasm3p6jvgh7hd3085w7zag66pizqjwws"; depends=[caret cli dplyr magrittr purrr reticulate rstudioapi stringr testthat tibble]; }; featurizer = derive2 { name="featurizer"; version="0.2"; sha256="05jvwsvpbdj94q3wl7ld6xmfc9p7ff9zsmryd3mmxz0hzbq2cnkc"; depends=[]; }; @@ -8363,21 +8697,21 @@ in with self; { federalregister = derive2 { name="federalregister"; version="0.2.0"; sha256="0qr8nd3ylnwcv1wxspw5i7ray5sh30zr648spg0lpqq8dp2b8p7b"; depends=[curl httr jsonlite]; }; fedregs = derive2 { name="fedregs"; version="1.0.0"; sha256="171j6r6qxnx9gk9x9gpdyh51ssrgmf7sczc4889qr3qqw15sm4bn"; depends=[dplyr httr magrittr purrr rvest stringi tidyr tidytext xml2]; }; feedeR = derive2 { name="feedeR"; version="0.0.10"; sha256="1p64c7ibwn6k5k3vsjxrcjr84czild7g8bqw0yv4axk52vk5jfkx"; depends=[digest dplyr lubridate readr stringr tibble xml2]; }; - feisr = derive2 { name="feisr"; version="1.1.1"; sha256="0kbmivia8mfn3l3g45aliz2hid28gx7mka06m2kb6kpkf77kjrbd"; depends=[aod dplyr Formula plm Rdpack]; }; + feisr = derive2 { name="feisr"; version="1.2.0"; sha256="012rspsw1xwl11gdr3nlpdmf24y9d2shwj81iqj1xill3l0mchwc"; depends=[aod dplyr Formula plm Rdpack]; }; fellov = derive2 { name="fellov"; version="0.1"; sha256="0z4b08ykajzwa5852dknqz5qqlmhklbwdq8x5zhyfmwba5zfbjav"; depends=[]; }; felp = derive2 { name="felp"; version="0.2.3"; sha256="05380225n0l2p8x4yr41frgvfzfl8x5b18v7qn8a4j9afki9y1g5"; depends=[curl prettycode]; }; fence = derive2 { name="fence"; version="1.0"; sha256="18l3fliww60d9n9hbfdny5vr9mi78krwpjj5sypdsb77d6332h9q"; depends=[fields ggplot2 lme4 MASS sae snow snowfall]; }; fergm = derive2 { name="fergm"; version="1.1.4"; sha256="1d979z2m5f13i1w9d8kh9rnaafavsap169w0nycpd5j2f3dfhyn7"; depends=[ergm extrafont ggplot2 matrixStats network reshape2 rstan]; }; fermicatsR = derive2 { name="fermicatsR"; version="1.4"; sha256="1587f67fypj22rdi1319zq765lcc9z518bzl1jr4lz6c8lrzfm9i"; depends=[]; }; + ferrn = derive2 { name="ferrn"; version="0.0.1"; sha256="1zp18hfnvmdb2w0qj432yj9a3939lad2hqymrmj8y1w3k0razifk"; depends=[dplyr geozoo gganimate ggforce ggplot2 ggrepel magrittr purrr rlang scales stringr tibble tidyr tourr]; }; ff = derive2 { name="ff"; version="4.0.4"; sha256="1rfj2ff5cxzdp9nvfnbgmswc1jvxz5vkxqgpv6gprwk32a0z3v12"; depends=[bit]; }; - ffbase = derive2 { name="ffbase"; version="0.13.1"; sha256="0knl0vnh8w4q3ry24gp4fd55ipnaj9hb1rwm31fs119kgmh3gd8x"; depends=[bit fastmatch ff]; }; - fflr = derive2 { name="fflr"; version="0.3.13"; sha256="0kvbrc02iybb416mg6vz4ci1qq31v48jgynklh6xbcxyj8369j0f"; depends=[httr jsonlite tibble]; }; + ffbase = derive2 { name="ffbase"; version="0.13.3"; sha256="1dp6lblfq2j7r1b4b8ls47jlx8j27n88d5vp8w116lb8pa01zxmk"; depends=[bit fastmatch ff]; }; ffmanova = derive2 { name="ffmanova"; version="1.1.0"; sha256="0019m9vxnh5yxr5k7zflzyhd533a842cjjkcpqyannshnrbfndvy"; depends=[]; }; ffmetadata = derive2 { name="ffmetadata"; version="1.0.0"; sha256="0gjv5fl3p0kz28c91l4qf34a2685a24l5841ixdg7wivfs5v9npv"; depends=[httr jsonlite]; }; - ffscrapr = derive2 { name="ffscrapr"; version="1.2.1"; sha256="06gv309729xf5qp2k5y58v9wk8w19ldqpm0zxsbv2i6aq6lc40va"; depends=[dplyr glue httr jsonlite lubridate magrittr memoise purrr rappdirs ratelimitr rlang stringr tibble tidyr]; }; + ffscrapr = derive2 { name="ffscrapr"; version="1.4.1"; sha256="1ccvfxg2hpgshpq8c6425x20j7zwc1w01cs7lfclkbdzhvdwaad5"; depends=[cachem checkmate dplyr glue httr jsonlite lifecycle lubridate magrittr memoise purrr rappdirs ratelimitr rlang stringr tibble tidyr]; }; ffstream = derive2 { name="ffstream"; version="0.1.6"; sha256="036ikhah4y85khgfmvxwsn3vavvw1is8i9k2lw474wxlh4cxa3kd"; depends=[Rcpp]; }; fftw = derive2 { name="fftw"; version="1.0-6"; sha256="1kkhn79x3akp2v28aqmif0dd2fn1pw145fjgyy29i4ab6pngazir"; depends=[]; }; - fftwtools = derive2 { name="fftwtools"; version="0.9-9"; sha256="0h8lyl2i6zq16ir7xnfj9dhyivxvwikm8lml19s8s8jx95z3n9x9"; depends=[]; }; + fftwtools = derive2 { name="fftwtools"; version="0.9-11"; sha256="0zrchp4l0jdbir2gibjf00x225y9giqk80zvqmr2yyvc12lwkw7i"; depends=[]; }; fgac = derive2 { name="fgac"; version="0.6-1"; sha256="0paddf5a4w0g2i0ay7my0bppwh534d8ghy6csfxl5jj034xjgwkk"; depends=[]; }; fgdr = derive2 { name="fgdr"; version="1.1.0"; sha256="0xllws7z3crbwibyhm3w06zagvlbmn3rcy8ccgkdhl0am3q7dz0a"; depends=[data_table jpmesh magrittr purrr raster readr rlang sf stars stringr terra tibble units xml2]; }; fgeo = derive2 { name="fgeo"; version="1.1.4"; sha256="0axglmk05li3plb79rccskhddjzq3pdx3mgxr8yqysymf1nscrq6"; depends=[cli crayon dplyr fgeo_analyze fgeo_plot fgeo_tool fgeo_x glue magrittr purrr rlang rstudioapi]; }; @@ -8385,11 +8719,11 @@ in with self; { fgeo_plot = derive2 { name="fgeo.plot"; version="1.1.10"; sha256="0lg74ckdm3nn91526cg6gly3lpsv315n2kfmf4bsmprj8k0zj31s"; depends=[dplyr fgeo_tool ggplot2 ggrepel glue magrittr purrr rlang stringr]; }; fgeo_tool = derive2 { name="fgeo.tool"; version="1.2.6"; sha256="0di1alxmxh47akbhy75b7vpix674xg4iynac4ga859nia56fisz1"; depends=[dplyr glue magrittr purrr readr rlang tibble tidyselect]; }; fgeo_x = derive2 { name="fgeo.x"; version="1.1.4"; sha256="0swps9rli74fmfb2j4kf55kw39gxz0q49m74ad4vcs0ylyp0sxrb"; depends=[memoise]; }; + fglsnet = derive2 { name="fglsnet"; version="1.0"; sha256="00qn4k4xm1zfkz77lys468c1mfx3vyfjkf19wdbcvgssrmf6w0xd"; depends=[lmtest MASS Matrix matrixcalc network sandwich sna]; }; fgm = derive2 { name="fgm"; version="1.0"; sha256="0i6lbqxxjq78dql14qwqs7slnn0kyls2g3a9biabny2narwf6n3m"; depends=[fdapace JGL]; }; fgof = derive2 { name="fgof"; version="0.2-1"; sha256="0bclkb3as0fl2gyggqxczndfyj9pfnni5pa3inpn5msrnjg4g2j2"; depends=[mvtnorm numDeriv]; }; fgpt = derive2 { name="fgpt"; version="2.3"; sha256="1d0qzsn4b68jhk07k97iv765jpmzzh1gwqpid0r76vg4cwqfs3n7"; depends=[]; }; fgui = derive2 { name="fgui"; version="1.0-8"; sha256="024fzd1c7iwqprn26hwjb9l2qlvvyzl449d7iixy0x69djwsrysv"; depends=[]; }; - fhidata = derive2 { name="fhidata"; version="2019.8.27"; sha256="0cm8ixpr3gjzprjcv43zdnysw8qhv72pf3fd2vckql01mlk16p42"; depends=[data_table]; }; fhircrackr = derive2 { name="fhircrackr"; version="0.2.1"; sha256="04a4rnv2r5q4069xv6wcfslw3rnacxjcgy1k258xkjx39bwsjzwa"; depends=[data_table dplyr httr plyr stringr xml2]; }; fiberLD = derive2 { name="fiberLD"; version="0.1-6"; sha256="1i3bl2qsc77m81l11an9ihl4vy86s8jd5x6pasib77rl2877ad4x"; depends=[doParallel foreach Matrix VGAM]; }; fic = derive2 { name="fic"; version="1.0.0"; sha256="18xz94w1ab17jfi61bdg9z3pm63g488v17ns2ivizkza4gg07pv8"; depends=[abind ggplot2 mvtnorm numDeriv scales survival tensor]; }; @@ -8402,15 +8736,15 @@ in with self; { filematrix = derive2 { name="filematrix"; version="1.3"; sha256="1v3aj1ng742msb0sfdnjsbqb508mqjf8jlq2v33vxldhradw5w0b"; depends=[]; }; filenamer = derive2 { name="filenamer"; version="0.2.3"; sha256="19gavhh5q7dziv0yc000w06qp58wk2cm52cxjl33p1q4cjk6gg3m"; depends=[]; }; files = derive2 { name="files"; version="0.0.1"; sha256="1vhhawqjjbb6fadkn3l10mvz63w3vmcwvl93fk0q9mhkifzlj9kc"; depends=[]; }; - filesstrings = derive2 { name="filesstrings"; version="3.2.1"; sha256="03vy2dnsqfaljxdb3qv2xih83qz7ck64pb6pcp887kmr6ca3iw3w"; depends=[checkmate magrittr purrr rlang strex stringi stringr withr]; }; + filesstrings = derive2 { name="filesstrings"; version="3.2.2"; sha256="111cjb2wja6q864wki8czpwm6xj8c3zwjlqcr8r36993ww72k6iy"; depends=[checkmate magrittr purrr rlang strex stringi stringr withr]; }; filling = derive2 { name="filling"; version="0.2.2"; sha256="02s2q8wsnxrl3914516r6z0vksbsfmcv7y8hqjl92h4cqqr7023w"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; }; fillr = derive2 { name="fillr"; version="1.0.0"; sha256="1gx1ihp8j90ywmm6mmmfq4jd6apxawk9s5dfw3jq0wm1c290zqpv"; depends=[]; }; finalfit = derive2 { name="finalfit"; version="1.0.2"; sha256="118ja2san73341m4vn9xmsazak4w6z6290rai4fl1jwf9amk2jnq"; depends=[bdsmatrix boot broom dplyr forcats GGally ggplot2 gridExtra lme4 magrittr mice pillar pROC purrr scales stringr survival tidyr]; }; - finbif = derive2 { name="finbif"; version="0.4.0"; sha256="1p29b2vvlk0nqblhqzgxi60kaz0k0agr3dgr08801qhqha8jd5jx"; depends=[digest httr jsonlite lubridate lutz]; }; + finbif = derive2 { name="finbif"; version="0.5.0"; sha256="0wws9nkc5c4va7psg5imd4y8a7nggl00s04m6dj43lwk0iz798s5"; depends=[curl digest httr jsonlite lubridate lutz]; }; finch = derive2 { name="finch"; version="0.4.0"; sha256="0q7riaxms460c6z2gb8i0q4pb348bnvry46bjd7pb9mh8fnl1i8b"; depends=[data_table digest EML hoardr xml2]; }; findInFiles = derive2 { name="findInFiles"; version="0.1.2"; sha256="0ihvk7ml4ry8pahvh1ikldvnsa3h6rs8lq0cc4z85r2n71p982mk"; depends=[htmlwidgets]; }; findR = derive2 { name="findR"; version="0.2.1"; sha256="1a7cf6kd7i2l4ffr2b17nb9xnpsjhf6fcwpjy06r0qgcapnfp54b"; depends=[pdftools stringr]; }; - findpython = derive2 { name="findpython"; version="1.0.5"; sha256="0icifm4z6hhpmcjrg75a875iph0ci890ss02kdv3725pijc236iy"; depends=[]; }; + findpython = derive2 { name="findpython"; version="1.0.7"; sha256="0jf10jpqla90x03kl3k77gnd255zmw9rvr8d724vb17cqawh9yar"; depends=[]; }; findviews = derive2 { name="findviews"; version="0.1.3"; sha256="1l1yhw5hvrn0rpkdsch8m69d2q5284jwccvv7r4ia4m0iqjfipj7"; depends=[ggplot2 gridExtra scales shiny]; }; finetune = derive2 { name="finetune"; version="0.0.1"; sha256="0gxsm8axq15pkbsq6cnxnh3cpmqfy4jx8hk54yyx27r0x342fl0g"; depends=[cli dials dplyr ggplot2 purrr rlang tibble tidyr tidyselect tune workflows yardstick]; }; fingerPro = derive2 { name="fingerPro"; version="1.1"; sha256="1a1lj8gyrbgcg8hr03cj2bjzlaafddspri7abc83ys1raqwd4j68"; depends=[car GGally ggplot2 gridExtra klaR MASS plyr Rcmdr Rcpp RcppGSL RcppProgress reshape rgl scales]; }; @@ -8419,18 +8753,19 @@ in with self; { finity = derive2 { name="finity"; version="0.1.4.1"; sha256="0xs3vx0vj165hj4dq8ivrdf6fcvj23zhp2ai79rgpyb5rr5ndkvc"; depends=[BH Rcpp RcppArmadillo stabledist]; }; finreportr = derive2 { name="finreportr"; version="1.0.2"; sha256="0xkkrgmwkasxgaf3lvvxl5azwbphk83fpa2asgva86qml7vwznlc"; depends=[curl dplyr httr rvest XBRL xml2]; }; fipe = derive2 { name="fipe"; version="0.0.1"; sha256="055jav8h4wws76jahm2d5dj49wkvzchh3f2vk5d50pny4dc7smar"; depends=[dplyr forcats furrr future httr jsonlite lubridate magrittr purrr readr stringr tibble tidyr]; }; + fipp = derive2 { name="fipp"; version="1.0.0"; sha256="0wr3czwsqwa1bpdcjk0r1739vjanxc0fv0vnl3r5lgykrbhw9v3r"; depends=[matrixStats Rcpp RcppArmadillo]; }; firebase = derive2 { name="firebase"; version="0.1.0"; sha256="154a386ga9bjgam9rxp0y9033hx55p7f3294z52r6dz2y87h3lz2"; depends=[cli R6 shiny]; }; firebehavioR = derive2 { name="firebehavioR"; version="0.1.2"; sha256="10krny60dkpgwjjnriap91qmrnfq1rl5ck4ynf4h6x016bv0m374"; depends=[ggplot2]; }; fishMod = derive2 { name="fishMod"; version="0.29"; sha256="0pbs4z27vwa3c42xdw3mr6l2i581bgvn2pk52kawbcnnlsff92ar"; depends=[]; }; - fishbc = derive2 { name="fishbc"; version="0.1.0"; sha256="1hfm8w6wyzci2hmgzlji9c3d6qjlm8ka2srkn3aigrlx2ll1lnx3"; depends=[]; }; + fishbc = derive2 { name="fishbc"; version="0.2.0"; sha256="1yaa1zzpfxwrjjk3kmf1bhkxd3lh2q7rc71dm7n3j30955lxqiqa"; depends=[]; }; fishdata = derive2 { name="fishdata"; version="0.1.3"; sha256="04162m1j570cdwhffkwjs1x1qlsc20djj1jwx2hl2cqmbp584ppq"; depends=[]; }; fisheyeR = derive2 { name="fisheyeR"; version="0.9"; sha256="1w6va7gakqq2q8hsvdszpn8s2ysdfc648bk5p5v3wbl5s403bci8"; depends=[tkrplot]; }; - fishflux = derive2 { name="fishflux"; version="0.0.1.3"; sha256="0l1drcjkvamw4849n2d8jk4ay3mfwqaya2vabm80hglfy4wqkca4"; depends=[BH curl dplyr fishualize ggplot2 httr plyr Rcpp RcppEigen RcppParallel rfishbase rstan rstantools StanHeaders tidybayes tidyr]; }; + fishflux = derive2 { name="fishflux"; version="0.0.1.4"; sha256="082y0vkzd4f3pvpjzcw3jl8vcjwdsrw7d3ms8q15swx9l7gp9f9d"; depends=[BH curl dplyr fishualize ggplot2 httr plyr Rcpp RcppEigen RcppParallel rfishbase rstan rstantools StanHeaders tidybayes tidyr]; }; fishkirkko2015 = derive2 { name="fishkirkko2015"; version="1.0.0"; sha256="1s8vsf604rc6qk0gahn61p3q8p9dhsbq14wsmrin7icq2xgl3y81"; depends=[]; }; fishmethods = derive2 { name="fishmethods"; version="1.11-1"; sha256="049a25rwxqy6a8jfm0irjka3bl7vkask32f9h7fsr5ddlyzvg5pz"; depends=[boot bootstrap data_table lme4 MASS numDeriv]; }; fishmove = derive2 { name="fishmove"; version="0.3-3"; sha256="1knbv087cg0czjcgdbrlpg69pp1dxb57b7ak5j1mcy7ay3a41a9h"; depends=[boot ggplot2 MASS plyr]; }; - fishtree = derive2 { name="fishtree"; version="0.3.3"; sha256="0wrns88zzwvmnw22268638ddllr4mn0dnvim5nmb7h1fsmx0ic3m"; depends=[ape jsonlite memoise rlang]; }; - fishualize = derive2 { name="fishualize"; version="0.2.0"; sha256="13z6n62fpans1fxjxlpz2xqqpq0ng5via67vk4nkvp0nxmlrlhky"; depends=[downloader dplyr ggplot2 gridExtra httr magrittr png rlang scales stringr tidyr]; }; + fishtree = derive2 { name="fishtree"; version="0.3.4"; sha256="00g8p885z5xcqp2chncb177s0l6lab2f069szj861z9dyf93xx4z"; depends=[ape jsonlite memoise rlang]; }; + fishualize = derive2 { name="fishualize"; version="0.2.2"; sha256="19iq2n9pxqf1yl6k2231lrc0ny5r7s0h5s59whrhwfh328q5cfqa"; depends=[curl downloader dplyr ggplot2 gridExtra httr magrittr png rlang scales stringr tidyr]; }; fit_models = derive2 { name="fit.models"; version="0.64"; sha256="1nk4x2q8cv79zcls61saf627ac0fci6jcrd6lmzk61asm2zhc27p"; depends=[lattice]; }; fitConic = derive2 { name="fitConic"; version="1.1"; sha256="0xlyv60r4fqvg3qhy4s9zkm2w65y4pg5nzl7a3k2z3fdpfcvkinz"; depends=[pracma]; }; fitDRC = derive2 { name="fitDRC"; version="1.1.1"; sha256="09z9l27iwl0fd3zy6rsdhmy8qbm5d9a4wcaj5rxp7ynlnpi102aa"; depends=[]; }; @@ -8441,26 +8776,28 @@ in with self; { fitbitScraper = derive2 { name="fitbitScraper"; version="0.1.8"; sha256="0b4d7xw6inp6l1dkfwyrzxwg4vspp4vzlwrhv14ajxrqz6irj8a0"; depends=[httr jsonlite stringr]; }; fitdc = derive2 { name="fitdc"; version="0.0.1"; sha256="1b1abib7jkl7a6r686r53qjw2ywb9q2h67is8691kkaqxpawg30p"; depends=[]; }; fitdistrplus = derive2 { name="fitdistrplus"; version="1.1-3"; sha256="1pjnqx0j26dai2fa4ip56wspmfsrcm9dpmxkg15y9623w5b58vbp"; depends=[MASS survival]; }; + fitmix = derive2 { name="fitmix"; version="0.1.0"; sha256="1z7jgxz119lkyggmgpykcslv56z1i7pnbp872jkdni77sx94x89c"; depends=[]; }; fitplc = derive2 { name="fitplc"; version="1.2-3"; sha256="1yg3ch907c4gk7q8hxgwqxgngkmy125j3ni917nkzi7hn59krd1n"; depends=[car nlme]; }; fitteR = derive2 { name="fitteR"; version="0.1.0"; sha256="1kgnyl7am966vkfap8gmvchlpankrcj5dv5aj7ws8ix9shr76db6"; depends=[dplyr DT maxLik R_utils shiny]; }; fitur = derive2 { name="fitur"; version="0.6.1"; sha256="04lr717lsbb4731nlzgscraj30knik4q68jzrl4i5f27912159r9"; depends=[actuar DT e1071 fitdistrplus ggplot2 goftest miniUI rstudioapi shiny]; }; - fitzRoy = derive2 { name="fitzRoy"; version="0.3.2"; sha256="0kzgp9mjkm26bk2gvw3y5ynbgr3f2jwhj4kmjb7nw9sys7826azl"; depends=[dplyr glue httr jsonlite lubridate magrittr purrr readr rlang rvest stringr tibble tidyr tidyselect xml2]; }; + fitzRoy = derive2 { name="fitzRoy"; version="1.0.0"; sha256="0mf8qksv01ahpnm7a76a5nnv4w0hma4hs0m1k7mwk9kpz2qzzq21"; depends=[cli dplyr glue httr jsonlite lubridate magrittr progress purrr readr rlang rvest stringr tibble tidyr tidyselect xml2]; }; fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.6.1"; sha256="1c59jaj2jz498mw2by6yss3nqmhxwn25j9ah89x2540pq4r1zifx"; depends=[]; }; fixedTimeEvents = derive2 { name="fixedTimeEvents"; version="1.0"; sha256="0z7ji8yzp4pj76ad64l7ivknkbi82ijx6abd3a18wicqhrh433sj"; depends=[]; }; fixerapi = derive2 { name="fixerapi"; version="0.1.6"; sha256="0ikf8dn0l9c9gshp4bph3wasl0bh6lfybinc8n1rvb202231hmgb"; depends=[jsonlite tibble tidyr]; }; - fixest = derive2 { name="fixest"; version="0.8.0"; sha256="1w8vdipg54q5mks3z91l2f0sycnw0rh91icljwb3d367pz6gbblp"; depends=[dreamerr nlme numDeriv Rcpp sandwich]; }; + fixest = derive2 { name="fixest"; version="0.8.4"; sha256="0rir4mxacick885d9wsr0czskfazvhcsp3k566vk9dw50gizd801"; depends=[dreamerr nlme numDeriv Rcpp sandwich]; }; fizzbuzzR = derive2 { name="fizzbuzzR"; version="0.1.1"; sha256="119gbi9y4n8r52hk9vj7zf795dv9xnk7lnngljjcd7ydnhygwd4h"; depends=[]; }; flacco = derive2 { name="flacco"; version="1.8"; sha256="15h2q9xgddy7gw6r52c2nk618f3z1mjn4xz9pzdvhm1d3kqggwa4"; depends=[BBmisc checkmate mlr]; }; flagr = derive2 { name="flagr"; version="0.3.2"; sha256="195c78cml2pjzfvpkaxbzcg1dfdqxi76138p0v3x3zzva9d8nlji"; depends=[]; }; flair = derive2 { name="flair"; version="0.0.2"; sha256="0hvg9k7l6vdhmbmql1viyn54f07r31ssyyhdv2v242i0npa2l25r"; depends=[dplyr evaluate ggplot2 glue knitr magrittr purrr rmarkdown stringr]; }; flam = derive2 { name="flam"; version="3.2"; sha256="0v6kcl4n7wq052p7jdgbzlh9fpk8bzlrqw12i6pib1wd3slj0asa"; depends=[MASS Rcpp]; }; + flametree = derive2 { name="flametree"; version="0.1.2"; sha256="0b00wqhqf2cf5flyr4ygdiz2iil74i21gmz4xgs2hci5r7r0smck"; depends=[dplyr ggforce ggplot2 magrittr paletteer purrr tibble tidyr]; }; flamingos = derive2 { name="flamingos"; version="0.1.0"; sha256="0gic6y8wpxffpyi3zy0wh7apy4z6argxbz284n80k2mzh6lh029k"; depends=[Rcpp RcppArmadillo]; }; flan = derive2 { name="flan"; version="0.8"; sha256="0v7xjx72zaa5g9xn82x694r9k35vc1n36dv5nbnxz46px0pczsd6"; depends=[Rcpp RcppArmadillo RcppGSL]; }; flare = derive2 { name="flare"; version="1.7.0"; sha256="0f992dmgnr6s8g3386i9bjfyf08q8srgw7sjz2yx7snj8znq7251"; depends=[igraph lattice MASS Matrix]; }; flars = derive2 { name="flars"; version="1.0"; sha256="06qma1ar1nj7n6g9alk1qydm5bkj6lsjx0pqkikxpb41d91civqk"; depends=[fda MASS Matrix Rcpp RcppEigen]; }; flashCard = derive2 { name="flashCard"; version="0.1.0"; sha256="1l1g3hy0gchsmdj04d065rl71hkvxydyqsmav5qwxyz2mdkknkhi"; depends=[htmlwidgets jsonlite]; }; flashClust = derive2 { name="flashClust"; version="1.01-2"; sha256="0l4lpz451ll7f7lfxmb7ds24ppzhfg1c3ypvydglcc35p2dq99s8"; depends=[]; }; - flashlight = derive2 { name="flashlight"; version="0.7.3"; sha256="0mkza0q5w87ayp6yhkb53xw4vfbbbryzsl4bs0s063390qwhn7sp"; depends=[dplyr ggplot2 ggpubr MetricsWeighted rpart rpart_plot tidyr tidyselect]; }; + flashlight = derive2 { name="flashlight"; version="0.8.0"; sha256="0gzpq3cmb8kspjhk74qrhlkdj8fjw75sywnwvkwbvy3cp11hffp6"; depends=[cowplot dplyr ggplot2 MetricsWeighted rpart rpart_plot tidyr tidyselect withr]; }; flatr = derive2 { name="flatr"; version="0.1.1"; sha256="10l98a3f57wahfpdqxj70r25zfhk4vzzd014pdnriy458yrfd7rw"; depends=[dplyr magrittr tibble]; }; flattabler = derive2 { name="flattabler"; version="1.2.0"; sha256="156q3af7bmqcaxvl35634ph8dzs6gdjxqqkgwi214kj2pywpqg2a"; depends=[dplyr readxl stringr tibble tidyr]; }; flatxml = derive2 { name="flatxml"; version="0.1.1"; sha256="1qsiqi8aszk9djlhysf6lcm41dq4pcw5jv6mdvb1mgxni7g3sgfv"; depends=[crayon httr RCurl xml2]; }; @@ -8471,16 +8808,18 @@ in with self; { flexmet = derive2 { name="flexmet"; version="1.0.0.0"; sha256="0xhr4i46s3k7a4yz2sd1sphn8wz27xcl580s2kqkr1ifg8941kv8"; depends=[]; }; flexmix = derive2 { name="flexmix"; version="2.3-17"; sha256="0jangf89174p0idh9afbicfiln2sz8jxc3bjc6n0j9036dw9n09n"; depends=[lattice modeltools nnet]; }; flexmixNL = derive2 { name="flexmixNL"; version="0.0.1"; sha256="0bk5v0cnsn1qkd1b86vj0bnpr4l9d6523kpkgzb1l1sqyscawfmm"; depends=[flexmix gnm]; }; - flexpolyline = derive2 { name="flexpolyline"; version="0.2.0"; sha256="1drnyad83267z80k73min3kxcf2casvlwb1kciz07ck8qnndvdkv"; depends=[Rcpp sf]; }; + flexpolyline = derive2 { name="flexpolyline"; version="0.2.3"; sha256="00qqxn2nps2fmaznzn8zpmkwg2k4pjcs5qzibrlw63h8c56q6f7n"; depends=[Rcpp sf]; }; flexrsurv = derive2 { name="flexrsurv"; version="1.4.5"; sha256="1xwh6fj854hr5j1mdh4cbp3hbrbdl4nb2ili876rq08wb9wq5pkf"; depends=[Epi formula_tools matrixcalc orthogonalsplinebasis statmod survival]; }; - flexsurv = derive2 { name="flexsurv"; version="1.1.1"; sha256="0x7p1rv51pplfyyzcg63ssb8z56mig7y0363hkr0219w3cvyq9nr"; depends=[deSolve mstate muhaz mvtnorm quadprog Rcpp survival tibble tidyr]; }; + flexsurv = derive2 { name="flexsurv"; version="2.0"; sha256="0vshsijqlzsz0xh426vsswpai1v5c990ggyniqqzsjbg3mn8dbl9"; depends=[assertthat deSolve dplyr generics magrittr Matrix mstate muhaz mvtnorm numDeriv purrr quadprog Rcpp rlang rstpm2 survival tibble tidyr tidyselect]; }; flexsurvcure = derive2 { name="flexsurvcure"; version="1.2.0"; sha256="06qppcjml380drd6brc60j1swasqrmdx82h6x69xpb65zn9wpa3c"; depends=[flexsurv gtools survival]; }; - flextable = derive2 { name="flextable"; version="0.6.1"; sha256="06nzyd2a9yaf9hmn740xrgxw0448z5dvlplcj3kizz9sm23aw9li"; depends=[base64enc data_table gdtools htmltools knitr officer rlang rmarkdown uuid xml2]; }; + flextable = derive2 { name="flextable"; version="0.6.5"; sha256="1njk4kc19r2n2awxjfz4svf1pivxhn12r9dqsdvbdpbfl5wmvxzl"; depends=[base64enc data_table gdtools htmltools knitr officer rlang rmarkdown uuid xml2]; }; flifo = derive2 { name="flifo"; version="0.1.5"; sha256="03x66l3ryrjvwbxxd0ncjrb5w9kc7fswmp5psb1cb7r87f395gm3"; depends=[bazar pryr]; }; - flightplanning = derive2 { name="flightplanning"; version="0.8.3"; sha256="18w28z2asb8jv7jpw6qzwcw9fm06h3z814xl8vssfd1p7bq5nfx8"; depends=[rgdal rgeos sp]; }; + flightplanning = derive2 { name="flightplanning"; version="0.8.4"; sha256="1n0mjrqlnfv4fvl512slw3d3vmlcn2lhf89jlfg2s0xfrd9k4pq8"; depends=[rgdal rgeos sp]; }; flightplot = derive2 { name="flightplot"; version="0.1.0"; sha256="1276lsahr9kdsvp1ismm3b5syvhfr7ifizzd79f8w1h2rjblva8x"; depends=[dplyr geosphere ggplot2 ggrepel magrittr rlang sf tibble]; }; flip = derive2 { name="flip"; version="2.5.0"; sha256="08x5hwxaxbgc745gblja7gcy0b5wbp7jf90lkha75zl5cc9iyksl"; depends=[cherry e1071 plyr someMTP]; }; flipdownr = derive2 { name="flipdownr"; version="0.1.1"; sha256="18z6y9anwg264gwqpxvm8mmv7xvc4m323mkg9db424vd1ji560f3"; depends=[checkmate glue htmltools jsonlite]; }; + flippant = derive2 { name="flippant"; version="1.5.3"; sha256="1d1rrmnhbbixkwscw2gqk6pm8jvvgikyrd4hzrpif4qd5xj833dj"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_strings assertive_types data_table ggplot2 magrittr minpack_lm plyr pracma stringi withr]; }; + flipr = derive2 { name="flipr"; version="0.2.1"; sha256="0xb47zd8irhdsi86w20nr42fq9k593hpc2lzdszw47ipirvrfbad"; depends=[cli ggplot2 magrittr purrr rlang tibble viridisLite withr]; }; flipscores = derive2 { name="flipscores"; version="1.1.0"; sha256="0pznbv8gq6jx0hd9dq6yjxyz4p75h8x0jznfa02yh4xdzjmamiw6"; depends=[car flip MASS plyr]; }; float = derive2 { name="float"; version="0.2-4"; sha256="1wf1dfybgbhvh9sa5z41xkh8liwp5n9gyydfq2mpg6bag0r457z1"; depends=[]; }; flobr = derive2 { name="flobr"; version="0.2.1"; sha256="16qxsvpdznw0wlmcxc6jwf550hx7yx1rifds00lq0kxly1pc4aak"; depends=[blob chk lifecycle]; }; @@ -8490,7 +8829,7 @@ in with self; { florestal = derive2 { name="florestal"; version="0.1.3"; sha256="12d3mfcix0rbkdn25c6fi0g91dlf92fv58g7bzal3118shrdgyjg"; depends=[BiodiversityR cowplot data_table dplyr flextable ggplot2 officer tidyr]; }; flower = derive2 { name="flower"; version="1.0"; sha256="1h2fvpjrvpbyrqb8hd51sslr1ibpwa7h9fiqy9anvf2yim5j11yq"; depends=[]; }; flowfield = derive2 { name="flowfield"; version="1.0"; sha256="1cx3i0w3xq781mmms4x20fshlf1i9bwxw9bxx562crix3fq3m50j"; depends=[]; }; - flowr = derive2 { name="flowr"; version="0.9.10"; sha256="18mjshfg3827b26b8nz52pl04ph7n887vw0ym5fybjm8gy5wwpdg"; depends=[diagram params whisker]; }; + flowr = derive2 { name="flowr"; version="0.9.11"; sha256="1cbbfrvgzqclvbhy20vjwgxbvnn3ljh0k1k54jf2si10bfw3zzi5"; depends=[diagram params readr whisker]; }; flsa = derive2 { name="flsa"; version="1.5.2"; sha256="0c6cdf3hkl3s5yqwbn1qhqhyaw5pgd83a5bc30wbzq03hk7rh9ks"; depends=[]; }; fluoSurv = derive2 { name="fluoSurv"; version="1.0.0"; sha256="1dv4lf7k28bih2qqkpy15f7d14ibxk48p3z6sj3dj5yvh25mhv81"; depends=[]; }; fluspect = derive2 { name="fluspect"; version="1.0.0"; sha256="0j80wx00s8ljqg1qaqw66rj7kxhhk438hb0syv0lr9vld03cxy2w"; depends=[pracma]; }; @@ -8501,31 +8840,38 @@ in with self; { fmbasics = derive2 { name="fmbasics"; version="0.3.0"; sha256="1dnf09rgwpc7n7ydlp7r5cwy2fa4vh1h9mbjqzfhk0208kz6jpl0"; depends=[assertthat fmdates lubridate tibble]; }; fmcmc = derive2 { name="fmcmc"; version="0.4-0"; sha256="10dr9zm92a7av43i3d03ni44f71c6vh6v5pznny8f47p8bzfhzih"; depends=[coda MASS Matrix]; }; fmdates = derive2 { name="fmdates"; version="0.1.4"; sha256="1bbcwkh65nf2gak9b81zgg32c5ihwhmai3nc43ayf6ivhqsxw8x0"; depends=[assertthat lubridate]; }; + fmerPack = derive2 { name="fmerPack"; version="0.0-1"; sha256="0p9jfgkzs97r6ya1x8ax7bza17b03grqxa22ja13s12vj0cdkv78"; depends=[abind flexmix glmnet MASS Rcpp RcppArmadillo]; }; fmf = derive2 { name="fmf"; version="1.1.1"; sha256="0b26040a39jys1z3h9mq9k7rjr0iyiialq442ir8vgzvmrh383cs"; depends=[C50 caret dplyr e1071 factoextra FactoMineR ggplot2 kernlab Rcpp RcppArmadillo solitude]; }; - fmpcloudr = derive2 { name="fmpcloudr"; version="0.1.1"; sha256="0w7fki96pzp8lvjmy3hy0qh1rvkds6sajig7bmy0a55pd36bcgvj"; depends=[dplyr httr jsonlite lubridate magrittr tidyr]; }; - fmri = derive2 { name="fmri"; version="1.9.3"; sha256="0is9lgp27g8dv3rmxn4mlf9m53izx5j7h974cy3ls3lq0pdp99va"; depends=[aws metafor nlme]; }; + fmpcloudr = derive2 { name="fmpcloudr"; version="0.1.5"; sha256="07fvmrprv0pka1wgp5ygcvv86jvn3h30xxkx44ssin15hfmank69"; depends=[dplyr httr jsonlite lubridate magrittr tidyr]; }; + fmri = derive2 { name="fmri"; version="1.9.6"; sha256="1wh77xwpm8f9d9vky3r7vfmkik3hls008ifk8hkm2rq6i06jj53n"; depends=[aws metafor nlme]; }; fmriqa = derive2 { name="fmriqa"; version="0.3.0"; sha256="1z09nf1c305a78c129jvs21b9z91wyhazz41wrn4bimmhfhx7szv"; depends=[ggplot2 gridExtra imager optparse pracma RcppEigen reshape2 RNifti tidyr viridisLite]; }; fmsb = derive2 { name="fmsb"; version="0.7.0"; sha256="0x1wkzfdvv4s5xmr0whcwjz4aac71gacwymj2c3mzj2bbswwlw45"; depends=[]; }; - fmtr = derive2 { name="fmtr"; version="1.3.0"; sha256="17ns21xn0kc12y2vj8whkih71415sb4pgj50s6x8f4pv8zqrc1kg"; depends=[crayon tibble]; }; + fmtr = derive2 { name="fmtr"; version="1.5.0"; sha256="04vx2ml4xik6q8hm1jv5bbk36m5vlbbm0d9vcyg6y1mwh9vxl4jq"; depends=[crayon tibble]; }; focusedMDS = derive2 { name="focusedMDS"; version="1.3.3"; sha256="18s86dbbpyajscqr9frprf2vp1zif7vh4lw5m0cjskfc6gmsdp2p"; depends=[htmlwidgets]; }; foghorn = derive2 { name="foghorn"; version="1.3.2"; sha256="0rnrwd94ym893fqrfxw8lkyj3zn72kqnxk9yvzxgv8w0c4hn1pj3"; depends=[clisymbols crayon curl httr jsonlite rlang rvest tibble xml2]; }; - foieGras = derive2 { name="foieGras"; version="0.6-9"; sha256="19jjq71bxjrc2mx6wjx6z00dcwrhcslcdx383bg02h9g48z7046k"; depends=[assertthat dplyr furrr future ggplot2 lubridate patchwork purrr RcppEigen rworldmap sf stringr tibble tidyr TMB trip wesanderson]; }; + foieGras = derive2 { name="foieGras"; version="0.7-6"; sha256="0g4c9id7q3jgjcgwmncp4bkw9njwb41cp6ycv7psiidkhmnzi03d"; depends=[assertthat CircStats dplyr furrr future ggplot2 lifecycle lubridate mvtnorm patchwork purrr RcppEigen sf stringr tibble tidyr TMB tmvtnorm trip]; }; folderfun = derive2 { name="folderfun"; version="0.1.4"; sha256="0rns8590r1897lj0gyrlj0zbaxjw2gjaxwnwdxiiw2kvyq7mjkis"; depends=[]; }; + folio = derive2 { name="folio"; version="1.0.0"; sha256="1al4ampy95fsxxlqhp63qmc0xn51gfa0gw2gghy28a4dqjg39sfg"; depends=[]; }; fontBitstreamVera = derive2 { name="fontBitstreamVera"; version="0.1.1"; sha256="0nipdlmhjv1wr3aidcl97nk6mppdkd65krgwqnhdsnv0jpfv761j"; depends=[]; }; fontHind = derive2 { name="fontHind"; version="0.1.1"; sha256="0qz3bj8vdy6jayy84p3vyxfwqll4v4qlklwq9wl981ii2k7g0vxf"; depends=[extrafont ggplot2 hrbrthemes]; }; fontLiberation = derive2 { name="fontLiberation"; version="0.1.0"; sha256="1w1rl0g4ayyp8lwppmz9yzj9cizg7i50g07216jkm1q5w0is9pmc"; depends=[]; }; fontMPlus = derive2 { name="fontMPlus"; version="0.1.1"; sha256="1hvviawbfs3m7mr46y2sjdxkksi10vpbnjic11rjaxqcy9a43f4y"; depends=[extrafont ggplot2 hrbrthemes]; }; + fontawesome = derive2 { name="fontawesome"; version="0.2.1"; sha256="0s94njqadn5zd9alysk2cay9dp44g20kah23wdcgkqf8dfwf9vb5"; depends=[htmltools rlang]; }; fontcm = derive2 { name="fontcm"; version="1.1"; sha256="1z6b4qdgj5vhvjqj90sm1hp0fffi1vxzvq71p0flxybzyb7d15la"; depends=[]; }; fontquiver = derive2 { name="fontquiver"; version="0.2.1"; sha256="0qv3i9hch7cygl9983s3w68wfh5qvym2jkm52pp06p6mq8a1i1wm"; depends=[fontBitstreamVera fontLiberation]; }; foodingraph = derive2 { name="foodingraph"; version="0.1.0"; sha256="0v40yk7lx0zxvpd3vz48h5gzx8ds8v3l12i2r7v9safgfvip6fvn"; depends=[cowplot dplyr ggplot2 ggraph igraph labeling magrittr minerva rlang stringr tibble tidyr viridis]; }; foodweb = derive2 { name="foodweb"; version="1-0"; sha256="1zm2a87g9bkpz90j9lax28s5hq1w7ia28qqb6vnvr1d7a47g9zi9"; depends=[rgl]; }; foolbox = derive2 { name="foolbox"; version="0.1.1"; sha256="06lcr5v6bcqqxskrwdm16b46zq4h67x8bwqya88jxs5bgi5w0hj3"; depends=[magrittr rlang]; }; + footballpenaltiesBL = derive2 { name="footballpenaltiesBL"; version="1.0.0"; sha256="1my67157frp4pxl84sb6dnb7rzp99g59mp9iwwv1s6wc391zfbsp"; depends=[]; }; + footprint = derive2 { name="footprint"; version="0.1"; sha256="00m3jaxiacf9wxa0wg0qxhp6c0prbf2l5c2cid6anz8rc5b6angv"; depends=[airportr dplyr magrittr rlang]; }; + foqat = derive2 { name="foqat"; version="1.6.4"; sha256="0s9nannxssfpqqfccz17k657c37f0b0bkqk05nrsrh62nlshhybd"; depends=[dplyr ggplot2 ggplotify gridExtra lmodel2 lubridate magrittr plyr reshape2 rvest stringr xml2]; }; + forImage = derive2 { name="forImage"; version="0.1.0"; sha256="1p8zfndvm7x7pnryphz944hgxcchvc6mwnr6ap15m0i6kwsh0nb4"; depends=[dplyr magrittr reticulate tibble]; }; forams = derive2 { name="forams"; version="2.0-5"; sha256="1fh3m9896ksv1h7b027yb955bzyv70yafhqvn5crkzalzk3jpb0s"; depends=[vegan]; }; - forcats = derive2 { name="forcats"; version="0.5.0"; sha256="1i4hblsjgwkrcwgvgsb5yj33pw1hwdj3lr9dvxymkv1kjdw0x5lg"; depends=[ellipsis magrittr rlang tibble]; }; + forcats = derive2 { name="forcats"; version="0.5.1"; sha256="12d2nv2w15085jscgidmjdnr1ryymciflcmal6ldmgp2fkl9dyy4"; depends=[ellipsis magrittr rlang tibble]; }; foreSIGHT = derive2 { name="foreSIGHT"; version="1.0.0"; sha256="0f1wy7iy3189890qi0gfqwbif3qlp9bfnzzqlg1yvwxi5pw55ikm"; depends=[cowplot directlabels doParallel fields GA ggplot2 jsonlite moments progress RColorBrewer rcorpora Rcpp rlang scales viridisLite zoo]; }; foreach = derive2 { name="foreach"; version="1.5.1"; sha256="1qb83b1jvpmk8d6kfibkm5q2hiki0x5gipy758mwa62n56gdcnpv"; depends=[codetools iterators]; }; forecTheta = derive2 { name="forecTheta"; version="2.2"; sha256="1a7ip3czm8k82kb8dx95m8q47kjhifdj51gzavd1zj9ni3vwbhfn"; depends=[forecast tseries]; }; - forecast = derive2 { name="forecast"; version="8.13"; sha256="0vrql5d4v28890np2m6ws1nr1fcl6frs1bz74vfkihkixcmkl3j9"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries urca zoo]; }; + forecast = derive2 { name="forecast"; version="8.14"; sha256="12bfw029xb1dndcjyn2r7a51i7hnkkbdilp69k97sz2v8b7v1y3s"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries urca zoo]; }; forecastHybrid = derive2 { name="forecastHybrid"; version="5.0.19"; sha256="1pg3wbmlagr01j3nikfh4dvh5lvbdfp7069wx9h9xsl7d4481ly1"; depends=[doParallel foreach forecast ggplot2 purrr thief zoo]; }; forecastML = derive2 { name="forecastML"; version="0.9.0"; sha256="01lqbmdmd6sk5xka19i9d466bzihxgp652v0kr13r82b591f67vq"; depends=[data_table dplyr dtplyr future_apply ggplot2 lubridate magrittr purrr rlang tibble tidyr]; }; forecastSNSTS = derive2 { name="forecastSNSTS"; version="1.3-0"; sha256="0p47x7ic2ib7znqbp8br4b2ci75f5w8x413z9g4n30m002p7irp1"; depends=[Rcpp]; }; @@ -8533,29 +8879,30 @@ in with self; { forensic = derive2 { name="forensic"; version="0.2"; sha256="0kn8wn6p3fm67w88fbarg467vfnb42pc2cdgibs0vlgzw8l2dmig"; depends=[combinat genetics]; }; forensim = derive2 { name="forensim"; version="4.3"; sha256="1jhlv9jv832qxxw39zsfgsf4gbkpyvywg11djldlr9vav7dlh3iw"; depends=[tcltk2 tkrplot]; }; forestControl = derive2 { name="forestControl"; version="0.2.1"; sha256="1m75s98bs8n3qad8gp6a333dh3mbi0rbbic9iwnsqyklzkhmx1nr"; depends=[dplyr magrittr purrr Rcpp tibble]; }; - forestError = derive2 { name="forestError"; version="0.2.0"; sha256="093qf50b4isiba4dcv06c1h0fy4db06605fiazwqd2cyd2gar46p"; depends=[data_table purrr]; }; + forestError = derive2 { name="forestError"; version="1.0.0"; sha256="07v6v5n3ixzv2if21a5ljmg12hk871r26c5gv8c5z8ki4562y4r7"; depends=[data_table purrr]; }; forestHES = derive2 { name="forestHES"; version="1.0-1"; sha256="05l04ly3l8xkdz3rnnrfa4y0wfmh1am2ixbz1vfarnqkc0zppwpj"; depends=[]; }; forestRK = derive2 { name="forestRK"; version="0.0-5"; sha256="0zm0q7bckmjl1j3yh5pw4r6rq64rfmzjvmvqniza5691jagjz60m"; depends=[ggplot2 igraph knitr mlbench partykit pkgKitten rapportools]; }; - forestSAS = derive2 { name="forestSAS"; version="1.0.1"; sha256="1jva2nivvcrczvqfhxa6vv1hsazp5m7djgfp7mfp1kpr136lyf2d"; depends=[spatstat]; }; - forestinventory = derive2 { name="forestinventory"; version="0.3.1"; sha256="0brbg0q8j9ymvm527db7063kgs6i6flja7mxqk7yvaf3dh8wsi46"; depends=[ggplot2 plyr tidyr]; }; - forestmangr = derive2 { name="forestmangr"; version="0.9.2"; sha256="0f65yb4kixbvr8jp6063rgd8hxd5pycsx1dx9477222rmhp6f723"; depends=[broom car dplyr FinCal forcats formattable ggdendro ggplot2 ggpmisc ggthemes gridExtra magrittr minpack_lm plyr purrr rlang scales systemfit tibble tidyr tidyselect]; }; + forestecology = derive2 { name="forestecology"; version="0.1.0"; sha256="04b6qxf5sdjc71f2c5bbr3y5c6i6lgvkx76kja8341krvf8qh0fr"; depends=[blockCV dplyr forcats ggplot2 ggridges glue magrittr mvnfast patchwork proxy purrr rlang sf sfheaders snakecase stringr tibble tidyr yardstick]; }; + forestinventory = derive2 { name="forestinventory"; version="1.0.0"; sha256="1v5gyx8i64zn1cinwvm86syq26vhfzw2maaiymy32fphzybwxivf"; depends=[ggplot2 plyr tidyr]; }; + forestmangr = derive2 { name="forestmangr"; version="0.9.3"; sha256="1x6iv225sxrzxg8g750zhpl158mvisa6z24y4xpm747qqcczy4n8"; depends=[broom car dplyr FinCal forcats formattable ggdendro ggplot2 ggpmisc ggthemes gridExtra magrittr miniUI minpack_lm plyr purrr rlang scales shiny systemfit tibble tidyr tidyselect]; }; forestmodel = derive2 { name="forestmodel"; version="0.6.2"; sha256="0pl9r8j2qd00b9kl585b4k54kic5fvzc56i8cn3hm5yp2hrrwyws"; depends=[broom dplyr ggplot2 rlang tibble]; }; forestplot = derive2 { name="forestplot"; version="1.10.1"; sha256="1vibb1vwf0fhnwbjlfc64b5q84vibpmgpylzjvdpykrrvsk26w1n"; depends=[checkmate magrittr]; }; forestr = derive2 { name="forestr"; version="2.0.2"; sha256="1kz8f3x2dmsprj2r23gz61fpwg7n14nbjxr16x4cpixvnk427p94"; depends=[dplyr ggplot2 moments plyr tibble tidyr viridis]; }; forestry = derive2 { name="forestry"; version="0.1.0"; sha256="0q7m0mrig8z2b2z2fng58qlqa6g58xlhfzchil2dvjh6xf3qvsh8"; depends=[data_tree]; }; foretell = derive2 { name="foretell"; version="0.2.0"; sha256="18vi438n480gizfhnciw67gngvbjnmky19186b1wy75av7fgc1gp"; depends=[nloptr]; }; forge = derive2 { name="forge"; version="0.2.0"; sha256="0pjfzsc35agkh0zfw2czwajkbsyn6liys5irl5bhz5r1vim3jmwa"; depends=[magrittr rlang]; }; - formatR = derive2 { name="formatR"; version="1.7"; sha256="1nsxbrx31k3y6yql30qkrvdfyznlia2qfvwv95mfiy7m7wdn4rm3"; depends=[]; }; - formattable = derive2 { name="formattable"; version="0.2.0.1"; sha256="1s7jjgm0j24vdwm39933ygh6xnxcfvzy4kl2mmfgas4czfcmd4rf"; depends=[htmltools htmlwidgets knitr rmarkdown]; }; + formatR = derive2 { name="formatR"; version="1.9"; sha256="0vbzvb91y5cxjbnwpww0r40r6m1l9w1qa979sv7ghhalzr7bib3i"; depends=[]; }; + formattable = derive2 { name="formattable"; version="0.2.1"; sha256="1vdxi0xmg019qyzjrp8bkjxciz245jcxsrkhfzd44ynqcwi4s3ag"; depends=[htmltools htmlwidgets knitr rmarkdown]; }; formula_tools = derive2 { name="formula.tools"; version="1.7.1"; sha256="15d3ikfmsh9zszfgfkrxb3jkipl41inm7n6bhs73kwlnklnygq2g"; depends=[operator_tools]; }; - formulaic = derive2 { name="formulaic"; version="0.0.7"; sha256="1nyqxkjp21ygzqybp770863gn1h1s20bc4yakl7q9wnd4j8xkp57"; depends=[data_table]; }; + formulaic = derive2 { name="formulaic"; version="0.0.8"; sha256="1nx6a73vw2hjbnqaw8x17ghhljd6z2avxv4arz3c3785pyayhg9k"; depends=[data_table]; }; formulops = derive2 { name="formulops"; version="0.5.0"; sha256="1mkpv5xjykrhgknq0gh4yg2a3j4xb8q2d6dh0wv8zd9h59hvrzda"; depends=[]; }; - forrel = derive2 { name="forrel"; version="1.2.0"; sha256="0h2d73i28fzr4v2hxiq1gk03jhvm612rzp4zj18sy56z464pj9bn"; depends=[glue maxLik pedmut pedprobr pedtools ribd]; }; + forplo = derive2 { name="forplo"; version="0.1.0"; sha256="15zkzq8vb6ydvic3r2lsna64vqlq12225cpdr7dsrfkn6kqjjzd5"; depends=[]; }; + forrel = derive2 { name="forrel"; version="1.3.0"; sha256="0dlp318dh77fwjcqyzx9ldwvcxa4xpwkpvnizgvbifnwxkggdj7j"; depends=[glue pedmut pedprobr pedtools ribd]; }; fortunes = derive2 { name="fortunes"; version="1.5-4"; sha256="109ly9kpfn6hy294ava8795wy5z9l1bnl98hhhv8kn9naf4camdg"; depends=[]; }; forward = derive2 { name="forward"; version="1.0.5"; sha256="0cc0s534s32b9ark2zazwqhgy0zsxb2p63r6503v82784rpqv2yv"; depends=[MASS]; }; forwards = derive2 { name="forwards"; version="0.1.3"; sha256="07374a1ak5h8q3diqyvsw3q1grqi3679w9sshf1jkhlrj7wn0dmv"; depends=[]; }; fossil = derive2 { name="fossil"; version="0.4.0"; sha256="1hbls9m8yapnfzpv9s850ixakmnan8min1ynk7dqkbpb2px85h1p"; depends=[maps shapefiles sp]; }; - foster = derive2 { name="foster"; version="0.1.0"; sha256="0b6ys2y3d2yj07q1q7wbgh7ichg617yza53jrpaqwh3190nm9s5r"; depends=[caret data_table dplyr randomForest raster reshape2 rgdal RStoolbox sp spatstat trend yaImpute]; }; + foster = derive2 { name="foster"; version="0.1.1"; sha256="1gkn3mgxsq3p7nazw80z61yhc1dqxhjvd667xklpjka4rrk2am8p"; depends=[caret data_table dplyr randomForest raster reshape2 rgdal RStoolbox sp spatstat spatstat_geom trend yaImpute]; }; foto = derive2 { name="foto"; version="1.0.0"; sha256="10mfxgg5f1r85cwr0jjnsa4csp1afcrjvyjvp31060nm638clcgh"; depends=[raster]; }; fourPNO = derive2 { name="fourPNO"; version="1.1.0"; sha256="0a0z2403kdh3fjb0ypjjk3m6fg77bg6m7hwb5jhlymcy2rwkay7w"; depends=[Rcpp RcppArmadillo]; }; fourierin = derive2 { name="fourierin"; version="0.2.4"; sha256="140721p4h5mjr7r25ckv8wfhbj88xw6v47b613r5bpalg8gw650l"; depends=[Rcpp RcppArmadillo]; }; @@ -8563,7 +8910,7 @@ in with self; { fpa = derive2 { name="fpa"; version="1.0"; sha256="0kgpl9qq0l10h0vdd2f8vnir0kdylh1jvvv5z4d9ygj1pl9qywhk"; depends=[fields reshape]; }; fpc = derive2 { name="fpc"; version="2.2-9"; sha256="0f7sfmpcycr9y7cy5gasyjm2ardxa62kglqms92mcr68jrp01c19"; depends=[class cluster diptest flexmix kernlab MASS mclust prabclus robustbase]; }; fpca = derive2 { name="fpca"; version="0.2-1"; sha256="13b102026xlfb7c2rb3xsqsymm7xpmaxppaafjkb5dx0b1lz0jrc"; depends=[sm]; }; - fpeek = derive2 { name="fpeek"; version="0.1.1"; sha256="0x7q5rl02ih0zmjfzvsc1vmn7s7yzdkf2gbmzc3mh7qadwpnf89p"; depends=[Rcpp]; }; + fpeek = derive2 { name="fpeek"; version="0.1.2"; sha256="0kv46g21ndxchg3q8ynq7hjjkh6i2zlc21axn5y1jjzigrw047ii"; depends=[Rcpp]; }; fpest = derive2 { name="fpest"; version="0.1.1"; sha256="013r8295spm02j558aqvnrnbkg2g73gl5vi4lqzngbw8yr8qlkri"; depends=[]; }; fplot = derive2 { name="fplot"; version="1.0.0"; sha256="0c8rgw23dvmwk2ssy8mbn29am72k6vji0xymz9rn5lrlmjk1lbpb"; depends=[data_table dreamerr Formula Rcpp]; }; fplyr = derive2 { name="fplyr"; version="1.2.1"; sha256="0k53rc7p0khv3mssghplz3ggzni2vl168mbwg72dgsn9b8nm98sy"; depends=[data_table iotools]; }; @@ -8572,10 +8919,11 @@ in with self; { fpow = derive2 { name="fpow"; version="0.0-2"; sha256="0am3nczimcfrm9hi02vl2xxsh703qjmr2j11y014mll3f2v1l8cy"; depends=[]; }; fpp = derive2 { name="fpp"; version="0.5"; sha256="1jqnx6bgpvnbbj2fa2b6m6aj8jd5cb9kz877r8kp7a5qj62xv1ww"; depends=[expsmooth fma forecast lmtest tseries]; }; fpp2 = derive2 { name="fpp2"; version="2.4"; sha256="15s4isc1l8759868n228r3wb1aw0psicas1ggsf1md2rjq0hq7n5"; depends=[cli crayon expsmooth fma forecast ggplot2 magrittr purrr rstudioapi]; }; - fpp3 = derive2 { name="fpp3"; version="0.3"; sha256="0nwjr3hi3ijf44iqwx769hcfzp1kccw7w0lqakdv499k6gybky1b"; depends=[cli crayon dplyr fable fabletools feasts ggplot2 lubridate magrittr purrr rstudioapi tibble tidyr tsibble tsibbledata urca]; }; + fpp3 = derive2 { name="fpp3"; version="0.4.0"; sha256="1920hlckc1bvdhqrp6mdl900c34k62v87k5l22zwwycx5gcicrxh"; depends=[cli crayon dplyr fable fabletools feasts ggplot2 lubridate magrittr purrr rstudioapi tibble tidyr tsibble tsibbledata urca]; }; fptdApprox = derive2 { name="fptdApprox"; version="2.2"; sha256="10f9n6cx5n6djblj97a2zw4khaj3phchmq4l8gk2fy535jjqaqlr"; depends=[]; }; fracdiff = derive2 { name="fracdiff"; version="1.5-1"; sha256="1dhfjlhr9sb38qgpsx0sm73l9lgc13d0fk32l7fmjfnalhr3n45q"; depends=[]; }; fracprolif = derive2 { name="fracprolif"; version="1.0.7"; sha256="124p5x59smqf8ba0xwhlq69w77zga2bv9plzwkadf700lzvaj2wx"; depends=[emg numDeriv]; }; + fractD = derive2 { name="fractD"; version="0.1.0"; sha256="1cnp8qrc6jpdj0grwkvn5jkdymjfhg5ybbhqvknxirc4g981q8bj"; depends=[imager plyr]; }; fractaldim = derive2 { name="fractaldim"; version="0.8-4"; sha256="0fln4qn0d79agnnlzi8b9g9qn90zynq1cg9v5isiyi71345v45nr"; depends=[abind]; }; fractional = derive2 { name="fractional"; version="0.1.3"; sha256="1jz83y53s0xdphh1z3v3z7xhcmhx7rp0iiazw2vdsx2747r3rirn"; depends=[Rcpp]; }; fracture = derive2 { name="fracture"; version="0.1.2"; sha256="1ankyzasm73ijniq9f70ca9j5my60rhkp5hy9mzf64rxnll1mpsi"; depends=[Rcpp]; }; @@ -8586,28 +8934,29 @@ in with self; { frailtypack = derive2 { name="frailtypack"; version="3.3.2"; sha256="1prj0y4skavzjh3w9zxf3vcmcdlkvg2ysshgr65ln9hzn281zqn0"; depends=[boot doBy MASS nlme rootSolve shiny statmod survC1 survival]; }; frair = derive2 { name="frair"; version="0.5.100"; sha256="1j557dqvc5xiz7xbl4h7vp55pc3hly8ci01qy36p02vlxhzf4hj3"; depends=[bbmle boot lamW]; }; frambgrowth = derive2 { name="frambgrowth"; version="0.1.0"; sha256="1xmy1zxp7aa2n8frlxhn1bl41zda1jldvvxb3q41yam3pslc8m1q"; depends=[]; }; - franc = derive2 { name="franc"; version="1.1.2"; sha256="1bhszr0g0blx0jmdwxkicn1zz1fhfgyhzsncgy3181i987429gdg"; depends=[jsonlite]; }; + franc = derive2 { name="franc"; version="1.1.3"; sha256="0va6zc9xm9gh14d9p8j7rlw1aj93iafqdljr9fqy7c18awlw545k"; depends=[jsonlite]; }; frapplot = derive2 { name="frapplot"; version="0.1.3"; sha256="12924szk2p0582nv97gi8pxrbv41zqpjryc6jqgg4llhp7ydz7xf"; depends=[]; }; frbs = derive2 { name="frbs"; version="3.2-0"; sha256="0biv6j31qi0f4i063ygmbp6v6ws1nxijn5kyhg5sz1rnbr0msl28"; depends=[]; }; frechet = derive2 { name="frechet"; version="0.2.0"; sha256="1006mgy9avwkwy0666maac59xp4j27wq5yy3pwc3h1r05myxw379"; depends=[corrplot fdadensity fdapace Matrix osqp pracma]; }; - fredr = derive2 { name="fredr"; version="2.0.0"; sha256="1x5bw5zpippcxbxn2nv5925fbx5992hkmmzg8bcdxs2vff3mrpag"; depends=[httr jsonlite rlang tibble]; }; - freealg = derive2 { name="freealg"; version="1.0-0"; sha256="0a3s89379lxr0dw068wfwzlqjq70zbaxil1vwwa4bf2i7s46mcgl"; depends=[Rcpp]; }; + fredr = derive2 { name="fredr"; version="2.1.0"; sha256="0073qh0drf1p38hc84m54n35hyza90m8zn48ihx3alxkiq1m8ijp"; depends=[httr jsonlite rlang tibble]; }; + freealg = derive2 { name="freealg"; version="1.0-2"; sha256="1k5dr02p313xs1ipk217bqlm8xb6620filcmq582lmykj2zxs774"; depends=[mathjaxr partitions Rcpp]; }; freedom = derive2 { name="freedom"; version="1.0.1"; sha256="1mrdl2cqdm2c68lx7lyixgiqw6xzwnx9c8j5q4annhiz107i9i22"; depends=[]; }; freegroup = derive2 { name="freegroup"; version="1.1-0"; sha256="0ssshs2d6l2ip1xx9x581w0cdnd2459a1mh360ybwajkjgak2ci6"; depends=[magic magrittr plyr]; }; freesurfer = derive2 { name="freesurfer"; version="1.6.8"; sha256="0ks6ms5vp38pykcg66w960nmfgq383iprrbbzw5dlx9xnrx4yhbh"; depends=[neurobase R_utils reshape2]; }; - freesurferformats = derive2 { name="freesurferformats"; version="0.1.13"; sha256="17lfrcjfbw3v2n04q0xxrpp17fy4iqhm469vd89j8j7cnbsnk5yl"; depends=[pkgfilecache xml2]; }; - freetypeharfbuzz = derive2 { name="freetypeharfbuzz"; version="0.2.5"; sha256="11agmqdp6sy32jk2840cj8wmgywq0yjar18zsnsn56qfvn4b1k1c"; depends=[fontquiver]; }; + freesurferformats = derive2 { name="freesurferformats"; version="0.1.14"; sha256="1icfg4wgxjmdl6h0zf084lqm3a3g7602cfycfy6j4dczd050kdjq"; depends=[pkgfilecache xml2]; }; + freetypeharfbuzz = derive2 { name="freetypeharfbuzz"; version="0.2.6"; sha256="0r3icgnq3jk4fm6z92cmhzdmflbk5df8zsmjg0dzpc4y48xafnk7"; depends=[fontquiver]; }; frenchCurve = derive2 { name="frenchCurve"; version="0.1.0"; sha256="1b8lkmhydz4jq8h5p117fwaygbsillzcfx0p7w0ljj8b8v57r6l9"; depends=[sp]; }; freqdist = derive2 { name="freqdist"; version="0.1"; sha256="1pb45jabv9s3qa7v1isd5wm9b0g9p04q5h18spcaax8397s0d2fv"; depends=[]; }; freqdom = derive2 { name="freqdom"; version="2.0.1"; sha256="0ig0ygnlcb5ndjjm5x8jpp37gvgwli9xv6zsvbbgfh72q418qswp"; depends=[matrixcalc mvtnorm]; }; freqdom_fda = derive2 { name="freqdom.fda"; version="0.9.1"; sha256="15wq9s3v441dybc8kglpbv9hdvsr9rjjq4qp4d2ipxglfp0iqj9p"; depends=[fda freqdom mvtnorm]; }; freqparcoord = derive2 { name="freqparcoord"; version="1.0.1"; sha256="011p8xh0i0x0w5rv5qz5a7fxwdhxd8l2bqi9bxv5almxd0y7ajqx"; depends=[FNN GGally ggplot2 mvtnorm]; }; freqtables = derive2 { name="freqtables"; version="0.1.0"; sha256="0d2yibb8689786icfladxfm51sqng909wigvqmwij9lkqq14rd80"; depends=[dplyr rlang stringr]; }; - frequency = derive2 { name="frequency"; version="0.4.0"; sha256="1m3hrbkspnmcl956f7m4fpfd980qdxmyagsm5kd79dzh3qka2xly"; depends=[DT ggplot2 gtools knitr rmarkdown]; }; + frequency = derive2 { name="frequency"; version="0.4.1"; sha256="0sjsc803ysyg2gfzb7z4jb2sikwxs99is2m03k5glfy3ylgphn0d"; depends=[DT ggplot2 gtools knitr rmarkdown]; }; frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.2.3"; sha256="1yzpgflldcdsd5kj0jpyj0vwx25f3l0x344glbrwvlwgdax9dkg8"; depends=[knitr pbapply urca vars]; }; frequentdirections = derive2 { name="frequentdirections"; version="0.1.0"; sha256="0rmifh221c8z3cqyqg0bfxnih9f64hvv98jz44i6grnlablfwwgw"; depends=[ggplot2]; }; fresh = derive2 { name="fresh"; version="0.2.0"; sha256="1787mm6w2s5x9scxy7r9cb77rgpmy4ngwkn4z8g3gs48mrab4bd9"; depends=[htmltools rstudioapi sass shiny]; }; friends = derive2 { name="friends"; version="0.1.0"; sha256="164p9g07vq3xs2lgg250yvzca4b0mp81pqbnjfdkzcqh5hmahsan"; depends=[tibble]; }; + fritools = derive2 { name="fritools"; version="1.4.0"; sha256="08d79dwlm0jx00gl0w1a6ccr46l58z2kphlp0sx2dakc2lma6vki"; depends=[]; }; frm = derive2 { name="frm"; version="1.2.2"; sha256="1dl0vca9r2dams99sc13pfpi0b3yb02x59f4c1jz07zz005c8l23"; depends=[]; }; frmhet = derive2 { name="frmhet"; version="1.1.3"; sha256="07sgsfhzrci8g1b0gicjfca1mgd8ppfqpkpp4q9bdxnjvdvlf45s"; depends=[]; }; frmpd = derive2 { name="frmpd"; version="1.1.0"; sha256="0irgqdr0vr8k408lsxcrjkjbjvqvmy5mnjw9c1ghs86isrp5mciz"; depends=[]; }; @@ -8617,25 +8966,25 @@ in with self; { frontiles = derive2 { name="frontiles"; version="1.2"; sha256="08qq25wbylvhvmq34wggyj0hwdlxfs9rfs8gjqsrg50xccchniqi"; depends=[classInt colorspace rgl sp]; }; frost = derive2 { name="frost"; version="0.0.4"; sha256="03snjlq4b9j84v0yimc3xzgjvryzzi76b9n53k0s2lvv1yzrri7x"; depends=[]; }; frostr = derive2 { name="frostr"; version="0.2.0"; sha256="1bsgdskdbyryq7jvhnb4z4xb1m5vadqv00qjlkgp41xh71wp2brs"; depends=[httr jsonlite tibble tidyr]; }; - frt = derive2 { name="frt"; version="0.1"; sha256="1qy76a1wkznaqzlyj1nq74mf1pnyly1s8gnff8q30zfccqk68cxv"; depends=[]; }; fruclimadapt = derive2 { name="fruclimadapt"; version="0.4.4"; sha256="19siwjjcjh0kh2wpbabgzjwrfgg2al0g7d4z91wdcp3spwx308vk"; depends=[data_table lubridate tidyverse zoo]; }; fs = derive2 { name="fs"; version="1.5.0"; sha256="15rqc3ljmcmgfvadj1j1kq7kvibagxic8sgplhlcdqqxax9idprn"; depends=[]; }; fsMTS = derive2 { name="fsMTS"; version="0.1.5"; sha256="1vxj9wkzpbk44hby4fdyhj72748c65by612kpphs6vmgzmw4y471"; depends=[freqdom glasso lars mpmi randomForestSRC]; }; - fsbrain = derive2 { name="fsbrain"; version="0.4.0"; sha256="1cq9hq7q11di3a967bsdj43mkmywvzxsacv4ndqm1dz6gn9dww5q"; depends=[data_table fields freesurferformats pkgfilecache reshape rgl squash]; }; + fsbrain = derive2 { name="fsbrain"; version="0.4.2"; sha256="173jg09ixi21djkg865wzr652azvqrc7zvskrwln5ryzz89093j5"; depends=[data_table fields freesurferformats magick pkgfilecache reshape rgl squash]; }; fscaret = derive2 { name="fscaret"; version="0.9.4.4"; sha256="18fhyfl3f8syyc3g937qx87dmwbv7dray6b97p1s6lnssiv61gsw"; depends=[caret gsubfn hmeasure]; }; fsdaR = derive2 { name="fsdaR"; version="0.4-9"; sha256="1iaqqdwhh29fhq4r64adfrjmsyzq4v60bz9111vkazj4kr45wxxv"; depends=[ggplot2 rJava rrcov]; }; fsia = derive2 { name="fsia"; version="1.1.1"; sha256="0id7cnswrqylgpwjil1zfn89ryrdpl20fim8x1srl8s1hm5bg35r"; depends=[]; }; fslr = derive2 { name="fslr"; version="2.24.1"; sha256="1psjqvjv8krlkj7dcfwygz563a4cpn7h21z330hxh5q10rwhabi8"; depends=[neurobase oro_nifti R_utils]; }; fsn = derive2 { name="fsn"; version="0.1"; sha256="1a5vsrk9l19rh46kxrfmgcv07l0pr4zn1q2f0chivq43pwmfm194"; depends=[Rfast]; }; fso = derive2 { name="fso"; version="2.1-1"; sha256="0hn2ypm0nwfbmnh9il78pi30x7gfmayfangqyh0d63ngyz40bvma"; depends=[labdsv]; }; + fspe = derive2 { name="fspe"; version="0.1.0"; sha256="0cdl6749nqz2nmknn8mjxxxm8axix9iv2micviwg7fhynqhsffp1"; depends=[corpcor GPArotation psych]; }; fssemR = derive2 { name="fssemR"; version="0.1.6"; sha256="1l80anvlf21kvwb95w5mn0i2q773z0vbznx1lqvgsawprhcdiv20"; depends=[glmnet igraph MASS Matrix mvtnorm qtl Rcpp RcppEigen stringr]; }; fst = derive2 { name="fst"; version="0.9.4"; sha256="0vwclzxww8mw9nnpyj29bn71mrr8jjg7ka03979h9rbzw6d9bjrr"; depends=[Rcpp]; }; - fstcore = derive2 { name="fstcore"; version="0.9.4"; sha256="1gdjwkq7i3hrnazsj8sqsalkfiz35397azlprngmn2n704ql0vch"; depends=[Rcpp]; }; + fstcore = derive2 { name="fstcore"; version="0.9.6"; sha256="1445m8gn41q9l9m25d5m4682yy0msb5jnmdd8w310cxxs1riza93"; depends=[Rcpp]; }; fsthet = derive2 { name="fsthet"; version="1.0.1"; sha256="0z6az1jcvdahgn97r6cpj1s6fn0lvr7j12gcw2r7wbpajrvyl5j6"; depends=[]; }; ftDK = derive2 { name="ftDK"; version="1.0"; sha256="1xs2rr2afjza97kpym5zkas3k78pilxjlh7lp1gc66banldr71g2"; depends=[dplyr httr pbapply purrr tibble]; }; - ftExtra = derive2 { name="ftExtra"; version="0.1.0"; sha256="00kldzc0r41hsd3s8403l3z1r7frnl09y7q33wjzwkq4s89h5q48"; depends=[dplyr flextable jsonlite magrittr purrr rlang rmarkdown stringr tibble tidyr tidyselect xfun yaml]; }; + ftExtra = derive2 { name="ftExtra"; version="0.2.0"; sha256="1nlwhck6f0llr6yci8y55dzcsdsi2yd758cmf4snjzhqm06kzrby"; depends=[dplyr flextable jsonlite magrittr purrr rlang rmarkdown stringr tibble tidyr tidyselect vctrs xfun yaml]; }; ftnonpar = derive2 { name="ftnonpar"; version="0.1-88"; sha256="0df9zxwjpfc939ccnm1iipwhpf76b34v0x74nsi1mm1g927dfl0i"; depends=[]; }; - ftrCOOL = derive2 { name="ftrCOOL"; version="1.1.0"; sha256="0agl01djp1zkzgiqlpnmrpd7qgysabbmclw2vv5a52x0hgk9iqgy"; depends=[]; }; + ftrCOOL = derive2 { name="ftrCOOL"; version="1.1.2"; sha256="08s1k47hjfgizfxpqlkqdir9pkhalqp3j9w047ll3wzx3jjx0jgn"; depends=[]; }; fts = derive2 { name="fts"; version="0.9.9.2"; sha256="08pwhi19db173d4nsk5rl8xa8qmaddj4bn3cjxb8ql4kny59i57q"; depends=[BH zoo]; }; ftsa = derive2 { name="ftsa"; version="6.0"; sha256="06g6qmz7qagm0izvq5d85h0hy851idpk7wi1hapw8xcl596irgf6"; depends=[colorspace e1071 ecp fda forecast MASS pcaPP pdfCluster rainbow sde strucchange]; }; ftsspec = derive2 { name="ftsspec"; version="1.0.0"; sha256="12f9yws1r26i240ijq0xqprl3pgbw50wv68jsm75ycplbs2jsyhs"; depends=[sna]; }; @@ -8643,23 +8992,25 @@ in with self; { fueleconomy = derive2 { name="fueleconomy"; version="1.0.0"; sha256="16a8wyliiidi6rw14ksimygfkl4a7yhxvss7l9bcvr1wfiplrn65"; depends=[]; }; fugeR = derive2 { name="fugeR"; version="0.1.2"; sha256="0kd90s91vzv0g3v9ii733h10d8y6i05lk21p5npb3csizqbdx94l"; depends=[Rcpp snowfall]; }; fugue = derive2 { name="fugue"; version="0.1.7"; sha256="1myvi9cizxvahb6wn2k26v3x958xsrm2p414ar05injmfjdfnsmi"; depends=[]; }; - fullfact = derive2 { name="fullfact"; version="1.3"; sha256="1dy5ppa22i9axqcwx2184qv2vjcbml0yh5b89zx9rg2zsnv4ygym"; depends=[afex lme4]; }; - fulltext = derive2 { name="fulltext"; version="1.6.0"; sha256="1zbfzyr5icwrgrb6zpng16z46ain6rf91j9sxw99p2ha4mkj200r"; depends=[aRxiv crminer crul data_table digest fauxpas hoardr jsonlite magrittr microdemic pdftools rcrossref rentrez rplos storr tibble xml2]; }; + fullROC = derive2 { name="fullROC"; version="0.1.0"; sha256="0pn4lh59snfcyyi28350lm4n9xh6y25hpjr38dc33bic4cfbqiyr"; depends=[]; }; + fullfact = derive2 { name="fullfact"; version="1.5"; sha256="1p2f4rf54hd0icy49fkq6p973rqisjjmmr1brwcv0fg22nv2kidg"; depends=[afex lme4]; }; + fulltext = derive2 { name="fulltext"; version="1.7.0"; sha256="10gylx7ckc5cxzp31p066qsy86941k528baddyf36q33gy46mkdv"; depends=[aRxiv crul data_table digest fauxpas hoardr jsonlite magrittr microdemic pdftools rcrossref rentrez rplos storr tibble xml2]; }; fun = derive2 { name="fun"; version="0.3"; sha256="09601ma4irmpkgjspq6zmr383m1pbgyfdkf7gw8w8gp0q7ab89aq"; depends=[]; }; funData = derive2 { name="funData"; version="1.3-5"; sha256="0qz6kywd6xp292yvzf5znpw0qd02zadmp29jd1kchnydbf3sk0mh"; depends=[abind fields foreach]; }; funFEM = derive2 { name="funFEM"; version="1.1"; sha256="08798lvryykrxfvp2297anzl4gi81gwvc1qyyzq16nafjf65kwfy"; depends=[elasticnet fda MASS]; }; - funGp = derive2 { name="funGp"; version="0.2.1"; sha256="0rby13vna776ffkdsc5pnci54k7g4493lz7f0d66g72siylxxy9c"; depends=[doFuture foreach future knitr microbenchmark progressr qdapRegex scales]; }; - funHDDC = derive2 { name="funHDDC"; version="2.3.0"; sha256="1dym1bzywng5yjfzpppxx043pwcbvrxxq0bn1d6xqqkqcpzn2zhp"; depends=[fda MASS]; }; - funLBM = derive2 { name="funLBM"; version="2.1"; sha256="1phxqjri4pb65lfx6nbldvqq61cw1n0gjq5pckry3sjzylsmz5bi"; depends=[abind fda funFEM ggplot2]; }; + funHDDC = derive2 { name="funHDDC"; version="2.3.1"; sha256="1fd3n3y5icm2lcdz5jzfybbbmmzbbgq949x1g4bx4s0h0dnc0rkk"; depends=[fda MASS]; }; + funLBM = derive2 { name="funLBM"; version="2.2"; sha256="0krv0cid34rgcik0hk1fhvsi3cbc19scgsnssczfb0c79jkxy3cw"; depends=[abind fda funFEM ggplot2]; }; funModeling = derive2 { name="funModeling"; version="1.9.4"; sha256="1zhmazw77phcdwj9wwxpwjfhwd8wyjc538acqiwq9f6sz8fw1cbb"; depends=[cli dplyr entropy ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales stringr]; }; func2vis = derive2 { name="func2vis"; version="1.0-1"; sha256="1d2dy7icrgp47szmizhk9x5azsynsv1qp6igxia2mlzkfbk27ffz"; depends=[devtools ggplot2 ggrepel igraph]; }; + funcharts = derive2 { name="funcharts"; version="1.0.0"; sha256="011wld51y8bhc4jzqmjrhnpfxvggm3v1ih18swlj071cqjj30pkh"; depends=[dplyr fda ggplot2 patchwork rlang tidyr]; }; funchir = derive2 { name="funchir"; version="0.2.0"; sha256="1rj5khv1xcaaip5xh8kcsp2jgmbmnc9q5kwr46l4mxvxyndndi1k"; depends=[data_table]; }; functClust = derive2 { name="functClust"; version="0.1.6"; sha256="0mdfxvrx3wk497a9bbkwnzbm6hm2s4wqs3h09m3hj48ybpqmhz9i"; depends=[clusterCrit multcompView]; }; functional = derive2 { name="functional"; version="0.6"; sha256="120qq9apg6bf39n9vnp68db5rdhwvnj2vi12a8j8243vq8kqxdqr"; depends=[]; }; functiondepends = derive2 { name="functiondepends"; version="0.2.1"; sha256="0i6ppm5xz1m3m29lvz4nqm31k33w18j8af160lalgc01i1n4n11c"; depends=[dplyr magrittr purrr stringr tibble tidyr tidyselect]; }; functools = derive2 { name="functools"; version="0.2.0"; sha256="0g62jdia3n09vq8mx1m2r4nl3jfcadzpym0wkldzzzjcfs90vl6b"; depends=[]; }; + fundiversity = derive2 { name="fundiversity"; version="0.0.1"; sha256="1pdmw8q374mfkvqk9wpg9x4yhanxl7jnm1csc5djlhk25md7brbd"; depends=[geometry Matrix vegan]; }; funest = derive2 { name="funest"; version="0.0.1.3"; sha256="1pi556klfnbmrsx5c0f3v4hdn5m4dxxm71ijivanpwfqnfls8xh3"; depends=[funData MFPCA pec prodlim purrr ranger Rdpack survival tdROC]; }; - fungible = derive2 { name="fungible"; version="1.96.3"; sha256="1c8yc7mazvir42vq27f5bascbaswqx84qhf1r7kwkm72cxg4m1j2"; depends=[clue GPArotation lattice MASS mvtnorm nleqslv Rcsdp RSpectra]; }; + fungible = derive2 { name="fungible"; version="1.97"; sha256="0vj9nxqzx29sa3iqrplramk7xzxi9h5qss0iqgh2q623izz0s5ih"; depends=[clue GPArotation lattice MASS mvtnorm nleqslv Rcsdp RSpectra]; }; funique = derive2 { name="funique"; version="0.0.1"; sha256="0p9k4nxjns1xid9vmslkaap0hm6yq6pbyvylgygd808if4q1z8k6"; depends=[]; }; funnelR = derive2 { name="funnelR"; version="0.1.0"; sha256="143lb048krgh8rkkz6sm8h464kdy62w29fvvyar795vqi10bb5fy"; depends=[ggplot2]; }; funneljoin = derive2 { name="funneljoin"; version="0.1.0"; sha256="17g1mvq9z5m29r0v2r2nn8980j515jamnpwvvnzj83vk84bz94rq"; depends=[broom dplyr glue magrittr purrr rlang tibble tidyr]; }; @@ -8668,21 +9019,20 @@ in with self; { funrar = derive2 { name="funrar"; version="1.4.1"; sha256="0xqccch59f8cz4a7ybjdr6k625bir5nsjrp4iyfirrb877d17m5z"; depends=[cluster]; }; funreg = derive2 { name="funreg"; version="1.2"; sha256="199zvqali0sb0z4yp20rm5da0kd7z3rgv47g1cb1apsbcw0cq51n"; depends=[MASS mgcv mvtnorm]; }; funtimes = derive2 { name="funtimes"; version="7.0"; sha256="0p0j9xsxz8fl4n0y6dchm0xr2gwc6v657wqx9qhbvb0r2wljizc6"; depends=[dbscan Jmisc Kendall Rdpack]; }; - furniture = derive2 { name="furniture"; version="1.9.7"; sha256="1czc1ayfpqf6h7n5fjzx1vwkzm9vg1dr62hl5k511b9kdc8lfsfh"; depends=[dplyr knitr magrittr]; }; - furrr = derive2 { name="furrr"; version="0.2.1"; sha256="16s6sgfgh1ayzhf3kvpy9vhsd5h6p57waj1xgbksgdmf4j1wkcq7"; depends=[ellipsis future globals lifecycle purrr rlang vctrs]; }; + furniture = derive2 { name="furniture"; version="1.9.10"; sha256="02dqs0b0vpn2chqhjylanq9xdrj2hw7ynd6xv94gkfk8syz3dqda"; depends=[dplyr knitr]; }; + furrr = derive2 { name="furrr"; version="0.2.2"; sha256="0kfd4hw1yn2mfxzjgiz4r6yi2vsp1j0wy5hdhzd6wha7vi9h7hg5"; depends=[ellipsis future globals lifecycle purrr rlang vctrs]; }; fusedest = derive2 { name="fusedest"; version="1.3.1"; sha256="1nz5bkvn8y9f8h0ya6wblryg7bwj1vnz1vyqmd1hfr85bxfgl83c"; depends=[igraph Matrix Rcpp RcppEigen]; }; fuser = derive2 { name="fuser"; version="1.0.1"; sha256="17lsfpd9hdichj3wflac896zyjbq7a8w2gmlgj8nbgg80f646fgr"; depends=[glmnet irlba Matrix Rcpp RcppEigen RSpectra]; }; - fusionchartsR = derive2 { name="fusionchartsR"; version="0.0.1"; sha256="1dfn4c1fyrzyi9pn30ha41sybabcr9ss5z2s3jgg4gs4kn2s6bak"; depends=[htmlwidgets jsonlite magrittr]; }; + fusionchartsR = derive2 { name="fusionchartsR"; version="0.0.2"; sha256="1g8vhdikrg8p5clvh9i2xg67b7zn1in0k4hw1s4rdbxsqx0pz6py"; depends=[caret htmlwidgets jsonlite magrittr pROC reshape2 shiny survival]; }; fusionclust = derive2 { name="fusionclust"; version="1.0.0"; sha256="1h03nlk4gnz4j5h2h5bxazkka2qq983h7nglm1ghzqvbqjk6sv37"; depends=[bbmle]; }; futile_logger = derive2 { name="futile.logger"; version="1.4.3"; sha256="1r3nayk0z9n1svbf8640vw90dal5q07nkn0gv4bnva3pbzb352sy"; depends=[futile_options lambda_r]; }; futile_options = derive2 { name="futile.options"; version="1.0.1"; sha256="0w15agpi88y3qkv6fl72zy2pzyplzgvnj41a4ixhg64mw1sck73s"; depends=[]; }; futile_paradigm = derive2 { name="futile.paradigm"; version="2.0.4"; sha256="14xsp1mgwhsawwmswqq81bv6jfz2z6ilr6pmnkx8cblyrl2nwh0v"; depends=[futile_options RUnit]; }; futility = derive2 { name="futility"; version="0.4"; sha256="0zjb87brz7pkx3nq3q30y69cmcxpqqsra447p60qh7005kgr9vx4"; depends=[]; }; future = derive2 { name="future"; version="1.21.0"; sha256="0bfiy17n5rghxw0702k0vgpjkk13268lniifdlx59flf0q16d7lh"; depends=[digest globals listenv parallelly]; }; - future_BatchJobs = derive2 { name="future.BatchJobs"; version="0.16.2"; sha256="08lh1sp0v1vagi34s218a1ygj63whkf3s9w0kyf25v64gsdavkzc"; depends=[BatchJobs future R_utils]; }; - future_apply = derive2 { name="future.apply"; version="1.6.0"; sha256="1zbfycjfvxnrigm6l2fd2zgnw96g0apiw426c73gkv3xv7bdy6ms"; depends=[future globals]; }; - future_batchtools = derive2 { name="future.batchtools"; version="0.9.0"; sha256="1srcc4vv9nm49nq8llxik9ys4f45lz2shwlc4l9wp0zmxinzi3sr"; depends=[batchtools future]; }; - future_callr = derive2 { name="future.callr"; version="0.5.0"; sha256="0rjvjmffc4m9kr4p40q1gyv1zf49m8q0fb04kmdi7a8q2jfflpna"; depends=[callr future]; }; + future_apply = derive2 { name="future.apply"; version="1.7.0"; sha256="1ns5cf80vyabvyz9qp6kpvkg4jycinn7x6v7x6692fgjapdnmyig"; depends=[future globals]; }; + future_batchtools = derive2 { name="future.batchtools"; version="0.10.0"; sha256="1ly98h2g7wpfxp2r8vl1hy7wqqgwgawjagz0m2iczjmcj4ix6avk"; depends=[batchtools future]; }; + future_callr = derive2 { name="future.callr"; version="0.6.1"; sha256="037xgv604vrbdqx4zbai8nqd2d9cf47f0rwxd7iihr09y8qknd19"; depends=[callr future]; }; future_tests = derive2 { name="future.tests"; version="0.2.1"; sha256="1f75y7s9yrsz8c3vbsvp55zllp6sbpjrxbxknm1rfhg4sc2ak33c"; depends=[cli crayon future prettyunits sessioninfo]; }; futureheatwaves = derive2 { name="futureheatwaves"; version="1.0.3"; sha256="122b2z86bzxfch67y6cpq8wj62mw0dgkzbmnpwi247kdx7w5mw1f"; depends=[data_table dplyr ggplot2 ggthemes leaflet Rcpp stringr tidyr]; }; fuzzr = derive2 { name="fuzzr"; version="0.2.2"; sha256="1cwq7a5j6lzrlz9dw3hsfap988rh1kkgf03yni7c33zl69xp5w77"; depends=[assertthat progress purrr]; }; @@ -8694,33 +9044,33 @@ in with self; { fuzzyreg = derive2 { name="fuzzyreg"; version="0.5.1"; sha256="19ppb1m655z3n7h4wcd5bwjciw4ynjbi883ki50mr5di3zy64n4r"; depends=[limSolve quadprog]; }; fuzzywuzzyR = derive2 { name="fuzzywuzzyR"; version="1.0.3"; sha256="1kbli1m44317m95a0r34vza9p27vd9ala05jrbrdkadninwdynal"; depends=[R6 reticulate]; }; fwi_fbp = derive2 { name="fwi.fbp"; version="1.7"; sha256="1wk9cr0kk6zkbf111bv87n7b1wwx1qrsbjxydvbjvy8bgz0nfa62"; depends=[]; }; + fwildclusterboot = derive2 { name="fwildclusterboot"; version="0.3.4"; sha256="1y8ggspwjy1bnl0av876gvy61xfq39w5nhzkf0a993p5sfgxcgc2"; depends=[collapse dreamerr Formula generics gtools Matrix Matrix_utils Rcpp RcppEigen]; }; fwsim = derive2 { name="fwsim"; version="0.3.4"; sha256="0fy87c1x5hihfcppv1pvk3b0pwl6ygqpka40x55gbpkgssdigb1l"; depends=[Rcpp]; }; - fxTWAPLS = derive2 { name="fxTWAPLS"; version="0.0.4"; sha256="1rf16rl3g71i8fr5gvv7nizvhbafw4ip8x4b2i6m3vxgf10wl293"; depends=[doParallel foreach geosphere ggplot2 MASS tictoc]; }; + fxTWAPLS = derive2 { name="fxTWAPLS"; version="0.0.6"; sha256="14iipydpd3wjlmjq812k0vvjbsd8hi1mxz6fn0rrcrifz0q7g0x8"; depends=[doFuture foreach future geosphere ggplot2 MASS progressr]; }; fxregime = derive2 { name="fxregime"; version="1.0-4"; sha256="0ml1q0xp90jfng6a60pfkp6j7wajk6pz4p4wm08rfqikgsdvp0m4"; depends=[car sandwich strucchange zoo]; }; - fxtract = derive2 { name="fxtract"; version="0.9.4"; sha256="0nhgk68rbk05sz8knyy6f2rj7bnbiq8mfchl5j8jin36nvxbzls9"; depends=[checkmate data_table dplyr future_apply magrittr R6]; }; fy = derive2 { name="fy"; version="0.3.0"; sha256="13803ld4b59ly5h3zlianag9901jyw6p70bsyz5dj7k62hg7ha3s"; depends=[data_table fastmatch hutils]; }; g_data = derive2 { name="g.data"; version="2.4"; sha256="14a4m0v38p3j1k1kymkxwydlgm8b73hlx9m80sg1l4aj38fvflzl"; depends=[]; }; g2f = derive2 { name="g2f"; version="0.2"; sha256="1jsmiv6v8ilpxg1k1npcgqa467hpyw7mzh5m8dp7bxar4j5npsp4"; depends=[KEGGREST minval sybil]; }; - g3viz = derive2 { name="g3viz"; version="1.1.3"; sha256="0nng2534kr8qpqxlyji093fc7929f1ra9gib8hjvh5y6xdgjzavm"; depends=[cgdsr htmlwidgets jsonlite stringr]; }; + g3viz = derive2 { name="g3viz"; version="1.1.4"; sha256="06wapd6vw72gc9i0raymd0l61l9qld967jxq5wjawpy8qrl3z6gk"; depends=[cgdsr htmlwidgets jsonlite stringr]; }; gCat = derive2 { name="gCat"; version="0.1"; sha256="10990ilsjk52kqkcdngj4nq0kcbn4w1syxl1mqjq2n5g1l002yjy"; depends=[]; }; gDefrag = derive2 { name="gDefrag"; version="0.3"; sha256="016vpj03drygxsa06jin225rfgjvjm938x65990ms15xcwrgv8nb"; depends=[igraph maptools rgdal rgeos sp]; }; gIPFrm = derive2 { name="gIPFrm"; version="3.1"; sha256="08rfdac442picbw1r3xyxjzf2dc57svg44am0714z4r72mshvj04"; depends=[]; }; gLRTH = derive2 { name="gLRTH"; version="0.2.0"; sha256="1drmmr576n3pbr0q1cnnx4k7r4iz061n2cizv1kpr3wcc1g291pn"; depends=[]; }; gMCP = derive2 { name="gMCP"; version="0.8-15"; sha256="01048j9489rrhv9syqrbw4c5i5gsll41ysm27awxw6l1rshbqsqn"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; }; - gMOIP = derive2 { name="gMOIP"; version="1.4.3"; sha256="0zk2m81kbsb40bjgvv29cl7azr2kfa528ph1lhrp88zsiv3hv3py"; depends=[dplyr geometry ggplot2 ggrepel MASS Matrix plyr purrr Rfast rgl rlang]; }; + gMOIP = derive2 { name="gMOIP"; version="1.4.6"; sha256="1pv61xcn7jh7347av4in1qsqxj1ddjyddmlx9pr8x0a6p96a5vfc"; depends=[dplyr geometry ggplot2 ggrepel MASS Matrix plyr png purrr Rfast rgl rlang sp tibble tidyr tidyselect]; }; gMWT = derive2 { name="gMWT"; version="1.1.1"; sha256="1vbw548fyrf012ry54p3gybdsil8c9llg2r9njhsiy7rb0gz2613"; depends=[clinfun Rcpp RcppArmadillo]; }; gPdtest = derive2 { name="gPdtest"; version="0.4"; sha256="00dlhnklfg2yp4hp7yjgr2nfswv22c007xq1mxdbkll62zgd94mq"; depends=[]; }; gProfileR = derive2 { name="gProfileR"; version="0.7.0"; sha256="1h1v0kgpsn04ald2izznh7fr2riwisj5hcgz4k7h3qc931rf0r4k"; depends=[plyr RCurl]; }; gRain = derive2 { name="gRain"; version="1.3-6"; sha256="0l95yvv3ig11k71xkvh0ivvkan4hvpmjsa12yg1laaaqiaqzzxnm"; depends=[graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; gRapfa = derive2 { name="gRapfa"; version="1.0"; sha256="07yzwzna9pdyzndxk6wwyl6v3gkfc7dvy1ixmdl3d38mcl1ahwyq"; depends=[igraph]; }; gRbase = derive2 { name="gRbase"; version="1.8-6.7"; sha256="121kfjydl96gfi3x2fr7qd83ha6lcjn7a0bwlphn1pi1nphwgbxa"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; - gRc = derive2 { name="gRc"; version="0.4-3.2"; sha256="0f8m83wqhmsn6p0v0msdzyy9vl900nc9ddr8y78181jxcd9mqd0d"; depends=[gRbase MASS]; }; + gRc = derive2 { name="gRc"; version="0.4.4"; sha256="0p1m816al9djv5fhzgsgrbbbcpx5c5wjxvxwni6gs2cwxbxmdvcp"; depends=[gRbase magrittr MASS Rcpp RcppArmadillo]; }; gRim = derive2 { name="gRim"; version="0.2.5"; sha256="0m3lc42r6qd6kps3y7jz11ry4886cc87ld1s1phypna98qjy6gky"; depends=[gRain graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; gSEM = derive2 { name="gSEM"; version="0.4.3.4"; sha256="18kh41ibvfflz59gykiq7j2c6a72i8b0w8c2mcprd1nzhnyhvmhy"; depends=[DiagrammeR htmlwidgets knitr MASS]; }; gSeg = derive2 { name="gSeg"; version="1.0"; sha256="0lixlirisnxk29zlrragi3l8j1abb5cl7zh6vhx7l5hjdvh8ldq9"; depends=[]; }; gStream = derive2 { name="gStream"; version="0.2.0"; sha256="1f4xnbavm99yhjmaahazigps41mqlfvvl29kf4fs1yjqr531y36b"; depends=[]; }; gTests = derive2 { name="gTests"; version="0.2"; sha256="1h1sd8mrzcniq7rx7frdlxwpnsn8lifng1x99fqq703hs3znl1yq"; depends=[ade4]; }; - gWQS = derive2 { name="gWQS"; version="3.0.1"; sha256="0nmzd17yqsazkszsz3nqmc8minvq1myw5rxal45rhgdh71l8iwrn"; depends=[broom cowplot dplyr future future_apply ggplot2 ggrepel kableExtra knitr MASS nnet plotROC pscl reshape2 rlist]; }; + gWQS = derive2 { name="gWQS"; version="3.0.3"; sha256="0hhbm846mscayb2217c01pm7652hbh2pzm0mfgjh3l6yjdbsi8ky"; depends=[broom cowplot future future_apply ggplot2 ggrepel kableExtra knitr MASS nnet plotROC pscl reshape2 rlist]; }; gWidgets2 = derive2 { name="gWidgets2"; version="1.0-8"; sha256="0p6lav6lrwgsw29sl8vshzgi8j2smcavx047qq31s9bsn2dcw58n"; depends=[digest]; }; gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-7"; sha256="14c933j0wj3lb5da75zxg3w3mfqh0nqk8rczbi4dnqd8sna6jks9"; depends=[gWidgets2 memoise RGtk2]; }; gWidgets2tcltk = derive2 { name="gWidgets2tcltk"; version="1.0-6"; sha256="0arh0yxx63m4df1ccrv0q3vkjncwv3ink8vkalp6ashi2932yfma"; depends=[digest gWidgets2 memoise]; }; @@ -8729,28 +9079,32 @@ in with self; { gaiah = derive2 { name="gaiah"; version="0.0.4"; sha256="1ibsbmmpagr7ix1c3bszrglqx95w44qyfy80vcq3w2dprs8vrrw6"; depends=[dplyr geosphere magrittr maptools raster rlang sp]; }; gainML = derive2 { name="gainML"; version="0.1.0"; sha256="1mqhrdjdmc2n7dxilxkqn6xq7z0qnxpigw5bbffnjvvsmdamah0n"; depends=[fields FNN]; }; gains = derive2 { name="gains"; version="1.2"; sha256="1nmrhc7qjlyzn04r1qyjdws5fin3idmi789kbxzilax12ya8xr7k"; depends=[]; }; + galah = derive2 { name="galah"; version="1.0.0"; sha256="0y2a6p95xa352s6s8nq56m5wadkvrh7ikd5sc0bs3nprf58p1vxb"; depends=[assertthat crul data_table digest httr jsonlite sf sp stringr wellknown]; }; galts = derive2 { name="galts"; version="1.3.1"; sha256="0jg0yng1kc6s0qdhq8ps38dsxdcrgdcn8dl2dlclw6rcbknb6h4k"; depends=[DEoptim genalg]; }; + galvanizer = derive2 { name="galvanizer"; version="0.5.1"; sha256="1f64vkdmklaga7jqqpcmpfcvv3kg9hyvpwm2y91njjgvcfxhb00s"; depends=[dplyr httr jsonlite lubridate magrittr rlang tibble tidyjson tidyr tidyselect]; }; gam = derive2 { name="gam"; version="1.20"; sha256="1zhy2fp7pxac8xp3z3hndhprj4s5gx3305b627vc78bal1ml3swi"; depends=[foreach]; }; gamCopula = derive2 { name="gamCopula"; version="0.0-7"; sha256="0zi9g2vxkn1hxc2qyyr1x8p1f9w7fc1j5dmm2mmm333gixkkz9nb"; depends=[copula doParallel foreach gsl igraph MASS mgcv numDeriv VineCopula]; }; gamRR = derive2 { name="gamRR"; version="0.7.0"; sha256="0zn8921a4i1lz5wpdfbd72pqb25r12abyqw7y2w53kfhdzs57f3l"; depends=[boot mgcv]; }; - gama = derive2 { name="gama"; version="1.0.3"; sha256="1k79m01r3y9am62414947zfwb1w1gh0nn48najivbjyk9i2avn9r"; depends=[ArgumentCheck cluster clusterCrit GA ggplot2 NbClust Rfast]; }; + gama = derive2 { name="gama"; version="1.0.3"; sha256="1k79m01r3y9am62414947zfwb1w1gh0nn48najivbjyk9i2avn9r"; depends=[cluster clusterCrit GA ggplot2 NbClust Rfast]; }; gamair = derive2 { name="gamair"; version="1.0-2"; sha256="1cjrd576l9md1jb1fc1y6iay5y49i0d8by024qsc7yik6f6mdl13"; depends=[]; }; - gambin = derive2 { name="gambin"; version="2.4.4"; sha256="1kxxc17hva0r9wibh14w1r7g67q1nj71vrpdx4vkbsjz0lj67nzm"; depends=[doParallel foreach gtools]; }; - gamboostLSS = derive2 { name="gamboostLSS"; version="2.0-1.1"; sha256="1zrmn2r9814q37nmc29p9lyvpgrz6q7pwby5h37ldsxzzwxqz1ig"; depends=[mboost stabs]; }; + gambin = derive2 { name="gambin"; version="2.5.0"; sha256="137z6dxrvf05ss9bqh96bsl8rm6gzpk7kdgnfqh355mn0m5h2zx6"; depends=[doParallel foreach gtools]; }; + gamboostLSS = derive2 { name="gamboostLSS"; version="2.0-5"; sha256="1qlcsfv9k9aydv2bdfmbrilxfcmp3nzixnlr59k8idg1f7ph04cl"; depends=[mboost stabs]; }; gamboostMSM = derive2 { name="gamboostMSM"; version="1.1.87"; sha256="0if0x92lch57ksll8d5i3jzk0kh40593b20c17g3hvc33920c7r0"; depends=[mboost]; }; gamclass = derive2 { name="gamclass"; version="0.62.3"; sha256="0i2nynl4b46rdl8f2zashcg0dvlhcq9paq8hx5y40xpxm8iljqab"; depends=[lattice latticeExtra randomForest rpart]; }; gameofthrones = derive2 { name="gameofthrones"; version="1.0.2"; sha256="10ns4yl1s8adlf334gl8yararj1fpxbg3gy7h69s554m4h878awk"; depends=[ggplot2 gridExtra MASS]; }; games = derive2 { name="games"; version="1.1.2"; sha256="01hbbr2hsxi5j9axpdl0jihpd55pa9hacjxmab8p7cixk3xqqqbf"; depends=[Formula MASS maxLik stringr]; }; gamesGA = derive2 { name="gamesGA"; version="1.1.3.7"; sha256="0km0z2haqgykl01xkzsbkpwibavgqfjygx7cg08ni68gw501689l"; depends=[shiny]; }; gamlr = derive2 { name="gamlr"; version="1.13-6"; sha256="1b2vpqwr63nh3slpm3ha8w2mxnzhg5yv8f5afja58k9db77kciad"; depends=[Matrix]; }; - gamlss = derive2 { name="gamlss"; version="5.2-0"; sha256="1q82md0439si0n7vqbbbdk45sjr0ad7i8mgrn3kwnr4h213pb4nk"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; + gamlss = derive2 { name="gamlss"; version="5.3-4"; sha256="06mh00jjxnqwknbv777hawjk0zm81ixrp35fg59mrlqz8y3p2w3j"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; gamlss_add = derive2 { name="gamlss.add"; version="5.1-6"; sha256="0g80bn0nszs2nmka6dypyvqnsgxp7mzhf5nd82n5x4jm3ca3dbdj"; depends=[gamlss gamlss_dist mgcv nnet rpart]; }; gamlss_cens = derive2 { name="gamlss.cens"; version="5.0-1"; sha256="1s83dgifidvc6cbrqirwlvwfzg08mlhmxxiqkbmnsy09i5j9fzd3"; depends=[gamlss gamlss_dist survival]; }; gamlss_countKinf = derive2 { name="gamlss.countKinf"; version="3.5.1"; sha256="1xalp909gxxhyhh4chlr1ssyfhydhw1w3szzbynajji98576zaqv"; depends=[gamlss gamlss_dist]; }; - gamlss_data = derive2 { name="gamlss.data"; version="5.1-4"; sha256="1dgfspbmps6ipzcmw681wjdp320nm50dwsxafgrcwxndqgc7fdqd"; depends=[]; }; + gamlss_data = derive2 { name="gamlss.data"; version="6.0-1"; sha256="1cjb2n5i5mnhmb5qbqycdbfg65j7nxb9s74yihqs9kpa39byrzcq"; depends=[]; }; gamlss_demo = derive2 { name="gamlss.demo"; version="4.3-3"; sha256="01p6abppwbnh2a2ks1g08z4iwq2fxf125y9s4qzssybsn76a3gf3"; depends=[gamlss_dist gamlss_tr rpanel]; }; - gamlss_dist = derive2 { name="gamlss.dist"; version="5.1-7"; sha256="0nzgq3rnziy0i2zxn88hqy3pakpyin2m2csk9j3zg39si66c6wcq"; depends=[MASS]; }; + gamlss_dist = derive2 { name="gamlss.dist"; version="5.3-2"; sha256="1lyf2rvkplywgyhcni93k52z3b89vv86yrgl38dx3ln3436r5ahc"; depends=[MASS]; }; + gamlss_foreach = derive2 { name="gamlss.foreach"; version="1.0-5"; sha256="073wdjj9cpr9vm774alap1w5v7akdyj4imy24mgr5nwj4028xdva"; depends=[doParallel foreach gamlss gamlss_data gamlss_dist glmnet]; }; gamlss_inf = derive2 { name="gamlss.inf"; version="1.0-1"; sha256="0m091zxjm5wvhm6mzbpzkr275n3qnlb3v4099k0a1jymahk4w7vr"; depends=[gamlss gamlss_dist]; }; + gamlss_lasso = derive2 { name="gamlss.lasso"; version="1.0-0"; sha256="089bcwyyk5pj9k46lmwi4m03aw35pdr9dr3n5kbwjbp72g7s0dyz"; depends=[gamlss glmnet lars Matrix]; }; gamlss_mx = derive2 { name="gamlss.mx"; version="6.0-0"; sha256="0b06nb6nq36ay0p5z57j5d4hrly5917wcsal7986mp1270iwnpip"; depends=[gamlss gamlss_dist nnet]; }; gamlss_nl = derive2 { name="gamlss.nl"; version="4.1-0"; sha256="083l5lsb0csxcp4vffvdv2nr7jk3s2gkcavx66m8inzw16j7xilz"; depends=[gamlss survival]; }; gamlss_spatial = derive2 { name="gamlss.spatial"; version="2.0.0"; sha256="1pgmlc6i7p5mjb1pc7b861yjl2gwr37bbzj3j2dl0qzybrs742mx"; depends=[gamlss gamlss_add gamlss_dist mgcv spam]; }; @@ -8759,44 +9113,48 @@ in with self; { gamm4 = derive2 { name="gamm4"; version="0.2-6"; sha256="128c725y9s07c1m9cvd9hgi9hldrymcs5divd8pw7bdjh9jvdiap"; depends=[lme4 Matrix mgcv]; }; gamm4_test = derive2 { name="gamm4.test"; version="0.1.0"; sha256="0ab6rksr88fsv6whp6cxyshpv5ixmf9lw51cl3rzk870r8q326wg"; depends=[doParallel foreach gamm4 Matrix mgcv plotly RColorBrewer]; }; gammSlice = derive2 { name="gammSlice"; version="2.0-2"; sha256="1klxg1yhmfaz1zjnw1kxl1lm5plkakqh014rpkak2lj8zgf8qnyy"; depends=[KernSmooth lattice mgcv]; }; - gamma = derive2 { name="gamma"; version="1.0.0"; sha256="19cqg8c3x89xydkf91vk3k13mi9nw82xhv6zc4naiwjxnvrwfi16"; depends=[ggplot2 IsoplotR rlang rxylib]; }; + gamma = derive2 { name="gamma"; version="1.0.1"; sha256="1m2wxqprfxb51fih5f9l4s0lk42gyglbgvhfxc0cm9n7pn3dhprl"; depends=[ggplot2 IsoplotR rlang rxylib]; }; gamreg = derive2 { name="gamreg"; version="0.3"; sha256="1svrgbb8qdy2hzpq1g38v2lzmlbrn7qljix827biqzwgiajy69gg"; depends=[doParallel foreach glmnet Rcpp RcppArmadillo robustHD]; }; gamsel = derive2 { name="gamsel"; version="1.8-1"; sha256="107hbshi36dcyykhy6w1i1ih84xwdqv1q3nad73d3krf7bhvhg5f"; depends=[foreach mda]; }; + ganGenerativeData = derive2 { name="ganGenerativeData"; version="1.1"; sha256="1dbbsymc6085z9avgzjrylci0xfcy4zw04186vmn4vg4khjqfv31"; depends=[Rcpp tensorflow]; }; ganalytics = derive2 { name="ganalytics"; version="0.10.7"; sha256="03jf7325cgg5p6lzcrzzzx0b40vf3l5vhw95lih098kpmlr1zadf"; depends=[assertthat googleAnalyticsR httpuv httr jsonlite lazyeval lubridate plyr R6 rvest scales selectr stringr tibble XML xml2]; }; - gap = derive2 { name="gap"; version="1.2.2"; sha256="0d5qcmf1lvipf28v3pdcn9prmm8idbcbsxjn54h2na0v6wmsarlw"; depends=[]; }; + gap = derive2 { name="gap"; version="1.2.3-1"; sha256="1rw93dnv3id64al46iybyznnvprv871qa4lnwdx18x8ym66fafil"; depends=[]; }; gap_datasets = derive2 { name="gap.datasets"; version="0.0.4"; sha256="1zlxm3nh1b1mqb94fq2b7sc7v99m9ywz7bz9lz5bhwblk5fzmjii"; depends=[]; }; - gapfill = derive2 { name="gapfill"; version="0.9.6"; sha256="0384v7capab7dbyvz6b2jvnh840z6ab3857my0h3cgsys3lhn3c5"; depends=[fields foreach ggplot2 quantreg Rcpp]; }; + gapfill = derive2 { name="gapfill"; version="0.9.6-1"; sha256="15mrn44v5l4sgxwlyp1rik5mdg7m2s6xxcdigc3sjd1yhxalgw12"; depends=[fields foreach ggplot2 quantreg Rcpp]; }; + gapmap = derive2 { name="gapmap"; version="0.1.0"; sha256="04dz7ns7xsa0q0v7sllaqlhk4mis8gvqzr2a1y4fiiqrk7337gmm"; depends=[ggplot2 reshape2]; }; gapminder = derive2 { name="gapminder"; version="0.3.0"; sha256="067cra1ca4ngwjx8d1y9pyzwcpsfi1wcal0glzyy6ghd1k6jflpv"; depends=[tibble]; }; - garchx = derive2 { name="garchx"; version="1.1"; sha256="1pw8igjimralggkcfynnp4fcc0wqb5rhkk7x3ymj9ysgif8fnfgj"; depends=[zoo]; }; - gargle = derive2 { name="gargle"; version="0.5.0"; sha256="1fykmiv3x8c9ai31r9wr7qcca51h6kqn9cgwbxvxfj15fhwskh4n"; depends=[fs glue httr jsonlite rlang withr]; }; - garma = derive2 { name="garma"; version="0.9.6"; sha256="03nf6nncikva8yw8hmmrsh9wy2ncr2v2dq1pr4xb360sqds5d028"; depends=[crayon FKF forecast ggplot2 lubridate nloptr pracma Rsolnp signal zoo]; }; + garchmodels = derive2 { name="garchmodels"; version="0.1.1"; sha256="1nmhsxhfbp7jn85jwnhm4p5kl0jc5n1bjwwwpia774ycr6krazwn"; depends=[dials dplyr magrittr parsnip purrr rlang rmgarch rugarch stringr tibble tidyr]; }; + garchx = derive2 { name="garchx"; version="1.2"; sha256="10z9kb80bcma3s54cp6r2c4v247ydf7fay3lb8hnqwcc5df76c6g"; depends=[zoo]; }; + gargle = derive2 { name="gargle"; version="1.1.0"; sha256="03y29dzz54bw9px5k8a72vmc000lcyrkc5l0izkqcciyi9ijkr3w"; depends=[cli fs glue httr jsonlite rappdirs rlang rstudioapi withr]; }; + gargoyle = derive2 { name="gargoyle"; version="0.0.1"; sha256="0lsjplfrc047lb3zjfsc8wl47kll7d85v824k7zlr0n34xbbypq7"; depends=[attempt shiny]; }; + garma = derive2 { name="garma"; version="0.9.7"; sha256="02jqlhafq6myk7v44cs0d34v30mjmh9bgq9a1arsrqi9ckk4g5ri"; depends=[BB crayon dfoptim FKF forecast GA ggplot2 lubridate nloptr pracma pso Rsolnp signal tswge zoo]; }; garray = derive2 { name="garray"; version="1.1.2"; sha256="0s2dgi556x9jnhafvzz4qkxdbq9dm12gsvsqd2g9iy3468fx9flq"; depends=[]; }; gaselect = derive2 { name="gaselect"; version="1.0.9"; sha256="089gyllcmq5rgf5yffclifc7rc8rmq4wk1dhznigxkij4zap67hx"; depends=[Rcpp RcppArmadillo]; }; gasfluxes = derive2 { name="gasfluxes"; version="0.4-4"; sha256="0gi0zk0h5rw75n6znada0cwa9qzy8higsiiqwgdm3q827j1x8iva"; depends=[AICcmodavg data_table MASS sfsmisc]; }; - gasper = derive2 { name="gasper"; version="1.0.1"; sha256="1dyrf1i1algzaafjs374xi3j787id6nqx7f0ha2wmisd2ax92jw0"; depends=[ggplot2 Rcpp RcppArmadillo rwavelet scatterplot3d]; }; - gastempt = derive2 { name="gastempt"; version="0.5.1"; sha256="1ycyk1a643vd4cdxinjvb194mxjp5p1hwmlda6x8qy0yhky0ibhw"; depends=[assertthat BH dplyr ggplot2 nlme Rcpp RcppEigen rstan shiny StanHeaders stringr tibble]; }; + gasper = derive2 { name="gasper"; version="1.1.1"; sha256="10kl5d8lm2jvqrfk0qliyb3afmk9bhjm5zvs4g31zpa3icbz9r2p"; depends=[ggplot2 Matrix Rcpp RcppArmadillo RSpectra]; }; + gastempt = derive2 { name="gastempt"; version="0.5.4"; sha256="02b35y0sq0piq5p8k5fviymqyqx1c2k793pm7j79xymmpzf8f52r"; depends=[assertthat BH dplyr ggplot2 nlme Rcpp RcppEigen RcppParallel rstan shiny StanHeaders stringr tibble utf8]; }; gaston = derive2 { name="gaston"; version="1.5.7"; sha256="14z94dpln4dvgrv2w7w9ik7h6rpvbf02qhq1hqzx8c2cndzxr21i"; depends=[Rcpp RcppEigen RcppParallel]; }; - gateR = derive2 { name="gateR"; version="0.1.4"; sha256="1ify8baw5n10bbb66q7lz60m036p846msrh2hiysg6xs7fvxdayf"; depends=[fields maptools pgirmess raster sp sparr spatstat tibble]; }; - gatepoints = derive2 { name="gatepoints"; version="0.1.3"; sha256="02qxxf4a6rl3l0jdgqxmzxfnqd9lh5i0q2knaxxsiz0nd74c1jg5"; depends=[]; }; + gateR = derive2 { name="gateR"; version="0.1.8"; sha256="0m7qgvks7z5dm9in21ll6ia9ilcpqrnn6mcnm4h7y0qnpixh9wz6"; depends=[fields lifecycle raster sparr SpatialPack spatstat spatstat_core spatstat_geom spatstat_linnet tibble]; }; + gatepoints = derive2 { name="gatepoints"; version="0.1.4"; sha256="0gwyrkxn4xd79cl60xa312k6nz17mdjdiym65dq7s2384fa80wbm"; depends=[]; }; gauseR = derive2 { name="gauseR"; version="1.0"; sha256="125jjd7s9wkx93isgrr3d6bkdmdf1x7000pbj9y634wd1jx8akgd"; depends=[deSolve]; }; gaussDiff = derive2 { name="gaussDiff"; version="1.1"; sha256="0fqjdxp2ibbami75ba16d02dz4rz5sk8mni45di9anydx44g9d45"; depends=[]; }; - gausscov = derive2 { name="gausscov"; version="0.0.10"; sha256="05xs8wj9yak6mrp1381z0safwlm1p84dc36dc0mjbranmisxf675"; depends=[]; }; + gausscov = derive2 { name="gausscov"; version="0.1.1"; sha256="0d6b8kxh4pdkr0d6znnlkrqhnlmwr45malajjvvq9nrlhlpwz3vp"; depends=[]; }; gaussfacts = derive2 { name="gaussfacts"; version="0.0.2"; sha256="095x7k7m7sy1gqkbm6wiqn26252dclz62sbnkv6cjvmbdxajl7m9"; depends=[]; }; - gaussplotR = derive2 { name="gaussplotR"; version="0.2.0"; sha256="12kz9qb78wss1lfijd3vw54i0fr8k2smsidmm2hw2d5vwzrf0bwi"; depends=[ggplot2 metR]; }; + gaussplotR = derive2 { name="gaussplotR"; version="0.2.5"; sha256="0amkgzgh6764ri30210nhbi3wcll3248fmkpclx010dxc3hllfdx"; depends=[ggplot2 metR rgl viridisLite]; }; gaussquad = derive2 { name="gaussquad"; version="1.0-2"; sha256="0bcvkssmwwngcd4cnv924n9h3c8z1w3x9c9bkwn5jbz9zyv1lfms"; depends=[orthopolynom polynom]; }; gawdis = derive2 { name="gawdis"; version="0.1.2"; sha256="0x9g8949ik4065l46k3lssnyadk0wyw816skpfqg0nv8z4hq77cz"; depends=[FD GA]; }; gazepath = derive2 { name="gazepath"; version="1.3"; sha256="1sv0vdwzmvpnj2k8lphnf4y12fi5md0j2725fjkv1n7a3dkd6faa"; depends=[jpeg scales shiny sp zoo]; }; gb = derive2 { name="gb"; version="2.3.3"; sha256="0gkdkbwr168vi7lgccla49l43rkmjcfrwlqdr65mg5syzcxrh7nh"; depends=[boot KernSmooth]; }; gbRd = derive2 { name="gbRd"; version="0.4-11"; sha256="06x97rw5i6v6cgjxkfhxnw4dn7lghn5q6ra7ri5ag1x9dkfzcl82"; depends=[]; }; gbeta = derive2 { name="gbeta"; version="0.1.0"; sha256="0611rynyybmiq6pj5jvwijdgx3hnr6mscv20lrqzlfplbmvmz0bj"; depends=[gsl Rcpp RcppEigen RcppNumerical Runuran]; }; - gbfs = derive2 { name="gbfs"; version="1.3.5"; sha256="0n8wjzq2ip4skipvca1sxh8wxag5fm2gd70dsjbz73gik06fdx70"; depends=[curl dplyr httr jsonlite lubridate purrr readr stringr]; }; + gbfs = derive2 { name="gbfs"; version="1.3.7"; sha256="1095jxbj3ab6n63d26m2wp4zi43g9vk25qp6mnxd10rfrdlnib5r"; depends=[curl dplyr httr jsonlite lubridate purrr readr stringr]; }; gbm = derive2 { name="gbm"; version="2.1.8"; sha256="1h9f4ww9yc3nsvghgr2q7jjrlz29ibabxjbax1sk5wmqh2wy6pbx"; depends=[lattice survival]; }; + gbm_auto = derive2 { name="gbm.auto"; version="1.4.1"; sha256="1qm98jz8322bpn7x29ph4lkx007mxhh53cjkwdw086q34ydmaikl"; depends=[beepr dismo gbm mapplots maptools raster rgdal rgeos sf shapefiles]; }; gbm2sas = derive2 { name="gbm2sas"; version="2.1"; sha256="0ssjlv849vssmncn01ccpp2myqib5f3g88g0d4rqma2z0ivdpk23"; depends=[gbm]; }; gbp = derive2 { name="gbp"; version="0.1.0.4"; sha256="0awg724gsfwlb0fjcvw0450qdsk4m8x8is16pj5c8fx6nc8rn8bv"; depends=[data_table magrittr Rcpp RcppArmadillo rgl]; }; gbs2ploidy = derive2 { name="gbs2ploidy"; version="1.0"; sha256="0gdjfqs9ccyaw7vi22wbyc742n1badr5ypr08g6rvi8ka5lmx836"; depends=[MASS rjags]; }; gbts = derive2 { name="gbts"; version="1.2.0"; sha256="1v8x4dnja8va28rjznyqa6js9wazndijasb95lfj2qwhxhgf5h65"; depends=[doParallel doRNG earth foreach gbm]; }; gbutils = derive2 { name="gbutils"; version="0.4-0"; sha256="01ka10k599c8q7l55jzkrvqlxhzdanc4xnmsh6js5ji5yr7v385f"; depends=[Rdpack]; }; - gcForest = derive2 { name="gcForest"; version="0.2.7"; sha256="10fjha76sgnrkhwjm0rm4hrbn0643p9dsyb5ahw43x8m5kmw2ydq"; depends=[cli crayon pkgdown reticulate]; }; gcKrig = derive2 { name="gcKrig"; version="1.1.4"; sha256="1dis2afkwdfziab8a8y8h4r692kb2pkmq8lbpgb6z4ygvhgr38kj"; depends=[Rcpp RcppArmadillo]; }; gcbd = derive2 { name="gcbd"; version="0.2.6"; sha256="1dvnly0aljv2c4x7sn3q55ncvfdfjfgp7w0k2900p77h4w8nixia"; depends=[DBI lattice Matrix plyr reshape RSQLite]; }; gcdnet = derive2 { name="gcdnet"; version="1.0.5"; sha256="159dl8v1n7s9wnfrjb6f0b3ssblkqgbfzs15vjxhc8xkz0jp9z1c"; depends=[Matrix]; }; @@ -8805,27 +9163,25 @@ in with self; { gclm = derive2 { name="gclm"; version="0.0.1"; sha256="0b1nr8k8m48x78m6fkga11ikkcxyjsjpvqcd1lp6n9n4hv7akmfp"; depends=[]; }; gclus = derive2 { name="gclus"; version="1.3.2"; sha256="1cz0g0i972955hhaji30rx8448x7f3as7z1sww9i5h86ybgirilw"; depends=[cluster]; }; gcmr = derive2 { name="gcmr"; version="1.0.2"; sha256="0mh542na2byb4aha548lfkzllfnk4rmzcm23jm6642pndvxpnfmj"; depends=[betareg car Formula lmtest nlme sandwich sp]; }; - gconcord = derive2 { name="gconcord"; version="0.41"; sha256="1n3pfwk6vip19q1zhbz1n164f9vi7mig8pcd07c4wxnm5ir9dagy"; depends=[]; }; gconsensus = derive2 { name="gconsensus"; version="0.3.0"; sha256="19xfxmnxqlxbziblpr318zix0i3h84498i5vgzz5ynwdi89xyjxl"; depends=[coda MASS rjags]; }; gcookbook = derive2 { name="gcookbook"; version="2.0"; sha256="11g1q187l4j31b6cdzdx5z3s14z3s09l7ynl36pzzn9j19l8cmrc"; depends=[]; }; - gdalUtilities = derive2 { name="gdalUtilities"; version="1.1.1"; sha256="11i97ahbqggd5zgr4w57ys3xmwhymbbfmd2w2yrg4riwhsbpxwyy"; depends=[raster sf]; }; + gdalUtilities = derive2 { name="gdalUtilities"; version="1.1.2"; sha256="1vw30gnmn3vrghm3n0yqs5swz7a3d07n0zd5flgiqrlya35hlhsc"; depends=[raster sf]; }; gdalUtils = derive2 { name="gdalUtils"; version="2.0.3.2"; sha256="0krapdy50nd5dvcdflz39dzxpig3zklng3hgxavqg2nvwazalvsc"; depends=[foreach R_utils raster rgdal sp]; }; gdalcubes = derive2 { name="gdalcubes"; version="0.3.1"; sha256="0yng7ixfwyry8f6v6zdkd1f1z8ac35n7mxwyb8ngrkb5jd6h2mcc"; depends=[jsonlite ncdf4 Rcpp RcppProgress]; }; gdata = derive2 { name="gdata"; version="2.18.0"; sha256="0zwdj7lscgxr8r62ii8hbdh4mb7sa9w4f5nv32zzrxdvymcpya2b"; depends=[gtools]; }; gde = derive2 { name="gde"; version="0.1.4"; sha256="1ypax1gwi8f9fkfmbm5qb845b70ch44m19rw8spi34fn3yrbb17l"; depends=[data_table DBI dplyr DT ggplot2 httr jsonlite leaflet odbc progress R_utils readr rgbif shiny shinycssloaders shinyWidgets stringr XML]; }; gdiff = derive2 { name="gdiff"; version="0.2-1"; sha256="11p3xx0gmqfjyl08znmnganhif0zi1c5kbbv9qkqayjbi3j79z86"; depends=[magick pdftools]; }; gdistance = derive2 { name="gdistance"; version="1.3-6"; sha256="093a29yb544gxldwxgkyfc9bhmz3by0pknnj1c666i6gz2rbxjic"; depends=[igraph Matrix raster sp]; }; - gdm = derive2 { name="gdm"; version="1.4.2"; sha256="1q2bmqrxlac72jdmaldf4m6cwv60aaxxqws518dcn83bs788mbcm"; depends=[doParallel foreach raster Rcpp reshape2 vegan]; }; + gdm = derive2 { name="gdm"; version="1.4.2.2"; sha256="0s81d8d7i95nvpfnppnwgg8raj9388a725j8hxjzgzqvypdlhx8p"; depends=[doParallel foreach raster Rcpp reshape2 vegan]; }; gdmp = derive2 { name="gdmp"; version="0.2.0"; sha256="0fy8x9l6swrb78apwq9d9msz2y8dkfd2fkyp1pkmzxwdb85lmcdm"; depends=[]; }; gdns = derive2 { name="gdns"; version="0.5.0"; sha256="1bicimkxsyfg9yqaikapwlv8x9xdvsb00fqnfka07i6b63109sxh"; depends=[httr jsonlite magrittr stringi tinytest]; }; - gdpc = derive2 { name="gdpc"; version="1.1.1"; sha256="1wdfmsc8g7paj3rj75wcvqcjw92bkgc57nz1wc90y67gh1xvxs1i"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; }; + gdpc = derive2 { name="gdpc"; version="1.1.2"; sha256="0g1mnxm78n928g7qjf0w7jzfm27z6mvz5p1rm25mxv7wsif5m6s6"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; }; gds = derive2 { name="gds"; version="0.1.0"; sha256="0kc3l93640x8d6g3pa9gbr7ci5hmryg9i1nqpasgnvb6ixv6azbm"; depends=[]; }; - gdtools = derive2 { name="gdtools"; version="0.2.2"; sha256="08njzin0c6biw62j5w30r9j85vr1m2cg4hmv5d76nym860yrlqjf"; depends=[Rcpp systemfonts]; }; + gdtools = derive2 { name="gdtools"; version="0.2.3"; sha256="1p3ip0qwpg8f63jfx0b8vbac6l20ddid8xvxzkfi6i858pybnawp"; depends=[Rcpp systemfonts]; }; gdxdt = derive2 { name="gdxdt"; version="0.1.0"; sha256="1yrjixq4srmaiy5iaprix4096yhf3ldyklgjag4kxd3l5acwap4h"; depends=[data_table]; }; gear = derive2 { name="gear"; version="0.3.4"; sha256="0ibn2kr0rjj546cbcqhr6x69s25xh7si5fri59055j42g62mdnxy"; depends=[autoimage optimx Rcpp]; }; gee = derive2 { name="gee"; version="4.13-20"; sha256="167pzgnmj4cjc41ykps1mfwi6s7y32zxyycn5z17vn4v0pp4q0ak"; depends=[]; }; - gee4 = derive2 { name="gee4"; version="0.1.0.0"; sha256="1vvzb9sc69g292zmh9djd15jgc7falypd5p7mzw6ps7mirpbnicf"; depends=[Formula Rcpp RcppArmadillo]; }; - geeCRT = derive2 { name="geeCRT"; version="0.0.1"; sha256="1ldmpc3hakk1lcikrd45v7y7a7iaf7bbnqsrp4jc80pkw7y739vi"; depends=[MASS mvtnorm rootSolve]; }; + geeCRT = derive2 { name="geeCRT"; version="0.1.0"; sha256="08p9nqzhrbzbkwhld7w49rgw363bswg8isqali3m04m7g76d7qfd"; depends=[MASS mvtnorm rootSolve]; }; geeM = derive2 { name="geeM"; version="0.10.1"; sha256="1r9zyjv7r7r7avdqi54dvczf971frz8pgrs1a04kan5mh4ls6xpy"; depends=[Matrix]; }; geecure = derive2 { name="geecure"; version="1.0-6"; sha256="0nmnrkfgblv38qvk66bdk8933icr59mayqwljkvmpy59sm6br2k5"; depends=[geepack MASS Matrix survival]; }; geepack = derive2 { name="geepack"; version="1.3-2"; sha256="19kh0rvc961y836rfjmh1j42ygji2vp6yghl5d1agzg5yx03xdcr"; depends=[broom magrittr MASS]; }; @@ -8837,7 +9193,7 @@ in with self; { gemlog = derive2 { name="gemlog"; version="0.41"; sha256="16pdhpx21avxjrawj7i47dxzz2wfhabzz5x3nln2pwaz5b147syz"; depends=[signal]; }; gemma2 = derive2 { name="gemma2"; version="0.1.3"; sha256="1l5axji33abrkm2b32ziilhfqssbq4ypv7kimd16fak6xjz50m0k"; depends=[Matrix]; }; gems = derive2 { name="gems"; version="1.1.1"; sha256="174mjnpldb0rwjvwdgpcg1acm526gs0pjf9gi5mn9d3x9yz4r5jx"; depends=[data_table MASS msm plyr]; }; - gemtc = derive2 { name="gemtc"; version="0.8-8"; sha256="1bklrfpb6aqpk9rzlzfz8gx0hfvxpdqc5xb26pw0d6vcng9vmq2v"; depends=[coda forcats igraph meta plyr Rglpk rjags truncnorm]; }; + gemtc = derive2 { name="gemtc"; version="1.0-0"; sha256="0936c803krichs4x6dyrz8rn2v7d19nkx0wfhibkcjv4irhpggvx"; depends=[coda forcats igraph meta plyr Rglpk rjags truncnorm]; }; gen2stage = derive2 { name="gen2stage"; version="1.0"; sha256="16xbzgkjskzm1wik3dznvwhqddrpmcgsgd372n4a67rbb46jgx6r"; depends=[clinfun]; }; gen3sis = derive2 { name="gen3sis"; version="1.2"; sha256="0fkcgicyr1ahsgpnmfz6pwppbxzx5yaiswgb5nk4djxla3qf10k2"; depends=[BH gdistance Matrix raster Rcpp sp stringr]; }; gen5helper = derive2 { name="gen5helper"; version="1.0.1"; sha256="0z7hisn57md18vcfb6f44hy6zzp9dirrjyxi4x1id3mqa3mligb6"; depends=[dplyr ggplot2 minpack_lm naturalsort plyr pracma rlang tidyr]; }; @@ -8849,9 +9205,9 @@ in with self; { gencve = derive2 { name="gencve"; version="0.3"; sha256="00wbmaffm7mbfv3zl6mb24w1df1a8p24girwdh3a522lw3045iwf"; depends=[C50 class e1071 glmnet lars MASS nnet plus randomForest rpart]; }; gendata = derive2 { name="gendata"; version="1.1"; sha256="1r5bhmfblhk6d31v0byhp4a0pmpri6vk697zmmx9b0hvhda7mllf"; depends=[]; }; gender = derive2 { name="gender"; version="0.5.4"; sha256="0z8in0hgzkqngv2x3630lbbdw9in1qgirr01kag35bdqrdffh3d4"; depends=[dplyr httr jsonlite]; }; - genderBR = derive2 { name="genderBR"; version="1.1.0"; sha256="0j5wsbv797wc48lc65yhaqhpwqyr662460vj59x7r9p7d7m1ncd0"; depends=[dplyr httr jsonlite]; }; + genderBR = derive2 { name="genderBR"; version="1.1.2"; sha256="19n3d6ps0wswq1bxgfqifq26svqf8q696im14wfglrl731mr0qbm"; depends=[dplyr httr jsonlite magrittr purrr tibble]; }; gendist = derive2 { name="gendist"; version="2.0"; sha256="0rs0sn1sb6j3pk2xncix04a093awlm2nw70g0rjhr7dlzmigspgb"; depends=[]; }; - geneExpressionFromGEO = derive2 { name="geneExpressionFromGEO"; version="0.3"; sha256="010149xrnaxkmsxh44gjlmhrgg0b41nj10fzgqi21q1w98cks9kw"; depends=[annotate Biobase GEOquery]; }; + geneExpressionFromGEO = derive2 { name="geneExpressionFromGEO"; version="0.6"; sha256="0hcq92lwvajh96afg65npldfahdcmslkvxlzam8svfbhkp05mqyw"; depends=[annotate Biobase GEOquery xml2]; }; geneHummus = derive2 { name="geneHummus"; version="1.0.11"; sha256="1m6yyjsvmn3w87cw4da8js5vi74k5y739gxdx1yscx1n50bc3m34"; depends=[curl dplyr httr rentrez stringr]; }; geneListPie = derive2 { name="geneListPie"; version="1.0"; sha256="0z2gawfzhm05dafj4zlj6ifmf0dy7p1hrpa59lzxrnrc0wr6laji"; depends=[]; }; geneNetBP = derive2 { name="geneNetBP"; version="2.0.1"; sha256="0sp1chyln5k2zsq7cdhvrqxwr2nhrll1pdl1l5g6fd4gjl2m1nwk"; depends=[bnlearn ggm gRain graph igraph Rgraphviz scales]; }; @@ -8865,28 +9221,27 @@ in with self; { generics = derive2 { name="generics"; version="0.1.0"; sha256="0qw7r0d2qvlj1pvrlpv30d6akml624ydxkk19hv85iv6pfyx2wdb"; depends=[]; }; genero = derive2 { name="genero"; version="0.1.0"; sha256="0akwwy5xbh7s40v8dr1zr7jfglv0iyh4zn0sb0rnz4r57qr6nh8w"; depends=[]; }; genesysr = derive2 { name="genesysr"; version="1.0.0"; sha256="05jp8z7313r5wi9a5yw7fh198l7nd2ywzwg4f23yp4kfrkkgawn5"; depends=[dplyr httr jsonlite]; }; - genetics = derive2 { name="genetics"; version="1.3.8.1.2"; sha256="1v0ylnia6c44v356dsmnkx6054vcxazpzsrdh3yph5ch5vg6gjrh"; depends=[combinat gdata gtools MASS mvtnorm]; }; + genetics = derive2 { name="genetics"; version="1.3.8.1.3"; sha256="0lljxvz7nc6y2z303icphar2niir0i407w5cyhy2pwspd9gwkwpy"; depends=[combinat gdata gtools MASS mvtnorm]; }; genie = derive2 { name="genie"; version="1.0.5"; sha256="07w6rf4a3d34j7dwz9zcxshg2sk1cd5v59xs3jxph17c9gga0nlq"; depends=[genieclust Rcpp]; }; - genieclust = derive2 { name="genieclust"; version="0.9.4"; sha256="1fghav2b35g3w9ip70hjjjclgv4ai28yh8ddgjqq23p0c5aqa25j"; depends=[Rcpp]; }; + genieclust = derive2 { name="genieclust"; version="1.0.0"; sha256="1gbbblr5yv686llych5cj9jc8vc57y53qknzld5z51za9aw6azn3"; depends=[Rcpp]; }; genio = derive2 { name="genio"; version="1.0.12"; sha256="15v9hdnb1jknbvflvgyyhcx0cqjn3v9zl66mswk59j56qm58bkr9"; depends=[Rcpp readr tibble]; }; genius = derive2 { name="genius"; version="2.2.2"; sha256="1nan192mbnp9n9j3ccqrg6qzz5rmxj537v031kn1802yiakz79m9"; depends=[dplyr purrr readr reshape2 rlang rvest stringr tibble tidyr tidytext]; }; geniusr = derive2 { name="geniusr"; version="1.2.0"; sha256="04h0a61ngs0cmjf23imx76bm82dzkp4q4j31h3xlic05dx2lvyan"; depends=[curl dplyr httr purrr rvest stringr tibble xml2]; }; genlasso = derive2 { name="genlasso"; version="1.5"; sha256="07f0gqvngiyd3x01qxbqz7xrz10ck1cbypp51ldg8lg8ln1zw76y"; depends=[igraph Matrix]; }; genlogis = derive2 { name="genlogis"; version="1.0.0"; sha256="01av5invhviii7adqihh10ib47rjzwfsqdgw3lfg1c72kzrqywgr"; depends=[distr doParallel foreach ggplot2 manipulate]; }; geno2proteo = derive2 { name="geno2proteo"; version="0.0.3"; sha256="1q054ai42f5gmrj791abj02f663zs7ymdh3pfs3b2lq6i4w9s2fb"; depends=[BiocGenerics GenomicRanges IRanges R_utils RUnit S4Vectors]; }; - genoPlotR = derive2 { name="genoPlotR"; version="0.8.10"; sha256="17vlzp84vas7m9fcrjp5z6ys782kgvdljbfk559war8sgbbn4hb1"; depends=[ade4]; }; + genoPlotR = derive2 { name="genoPlotR"; version="0.8.11"; sha256="01qn81nsdk3s150gqwisb7xnm4hq5sfzd2zrzpn9kj0rigzgf9zi"; depends=[ade4]; }; genodds = derive2 { name="genodds"; version="1.0.0"; sha256="00sh561qcabcz5igcfvkjjila0qi2i5imj8cn0msa1gvqf27ps4d"; depends=[Rcpp]; }; genogeographer = derive2 { name="genogeographer"; version="0.1.19"; sha256="0q56ysv5333i27iv1gmd9ilbgn3rw8sb9yq7z76gmn1fak5aqci8"; depends=[dplyr DT forcats ggplot2 knitr leaflet magrittr maps purrr readr rio rlang rmarkdown shiny shinycssloaders shinyjs shinyWidgets tibble tidyr]; }; genomeplot = derive2 { name="genomeplot"; version="1.0"; sha256="15v01ngxq7kxav1bhw1mvqradrmvwsad5xh9l5skivb5smh9795w"; depends=[ggplot2]; }; genomic_autocorr = derive2 { name="genomic.autocorr"; version="1.0-1"; sha256="1lidrjz1flxw4jvhqdi8y813m7ss4kkvm7bxsdpz60dxxw3204gm"; depends=[data_table magrittr reshape]; }; - genomicper = derive2 { name="genomicper"; version="1.6"; sha256="12msl6syw5a3dvxg9fr1yprcpb9qwn8v2dvkpxgagal11p9q1kx7"; depends=[DBI]; }; genotypeR = derive2 { name="genotypeR"; version="0.0.1.8"; sha256="1kwzjn6hrnfizs44cz4a8qa4mdhdzqssc4axx0s6vngmkmsrffig"; depends=[colorspace doBy plyr reshape2 zoo]; }; - genpathmox = derive2 { name="genpathmox"; version="0.5"; sha256="06h8bwx2jzwc4jr4jvsjcph2svfg3s78vjmwjrliq3jynychd9mh"; depends=[diagram quantreg]; }; - genpwr = derive2 { name="genpwr"; version="1.0.2"; sha256="0k05l0d2qk2g3ic6f46xkhgy8ziwalrfx4nc0qi2k7i44kz720mg"; depends=[ggplot2 MASS nleqslv]; }; + genpathmox = derive2 { name="genpathmox"; version="0.6"; sha256="0fdxh0fwig711fpd6vlzdi1d3klyazanry4gnxlzx8byg9kzcz7q"; depends=[diagram quantreg]; }; + genpwr = derive2 { name="genpwr"; version="1.0.4"; sha256="0cys4zmfq07g99xywqampvmn8g0a6bjjj368d62q5xki2mi9z649"; depends=[ggplot2 MASS nleqslv]; }; genridge = derive2 { name="genridge"; version="0.6.7"; sha256="07mdkkq4j8i5x8d4yfsp2rfpf7gkcgdcsw9b2ng5f7gdnblrw0dr"; depends=[car]; }; genscore = derive2 { name="genscore"; version="1.0.2"; sha256="0i1wg65cpyc7x1h8dbq0i6q8979lw15zhmn7zn1r8gj3nxl7my0b"; depends=[mvtnorm Rdpack stringr tmvtnorm]; }; genset = derive2 { name="genset"; version="0.1.0"; sha256="02zldi136sfnq1i8pwb3b97zd44pjdgnfadk4bqp36wm8x95phwi"; depends=[]; }; - gensphere = derive2 { name="gensphere"; version="1.1"; sha256="1xzli40fw94n89cv2qyb321csad1w9zidqc226wlifl2m44cw6f7"; depends=[geometry mvmesh rgl SimplicialCubature SphericalCubature]; }; + gensphere = derive2 { name="gensphere"; version="1.3"; sha256="0cf1xmwi32x3ga9m5k7a93vdwix84ny7wxb74mddmfvb3m1v4c7g"; depends=[geometry mvmesh rgl SimplicialCubature SphericalCubature]; }; gensvm = derive2 { name="gensvm"; version="0.1.5"; sha256="1r0f3l6df1sn3vx5sjssx8p35lw100q0qz6v1fckdfw04z53g4im"; depends=[]; }; geoBayes = derive2 { name="geoBayes"; version="0.6.3"; sha256="153a7kp73wxm5hzzq038p3mnykhakv0c9qa8fpbjijccmbi89970"; depends=[coda optimr sp]; }; geoFKF = derive2 { name="geoFKF"; version="0.1.0"; sha256="0fapxfckyhgs1lzaviicnrhmjzdlkxfg2ccn46zcrybqq995g9js"; depends=[numDeriv Rcpp RcppArmadillo]; }; @@ -8894,45 +9249,45 @@ in with self; { geoR = derive2 { name="geoR"; version="1.8-1"; sha256="1lvgkpvv4a05lsb1dgphpv733lxbpcj7p2bj1yjjbfch8n04f1lr"; depends=[MASS RandomFields sp splancs]; }; geoSpectral = derive2 { name="geoSpectral"; version="0.17.5"; sha256="0bw8mv1kq27hql37zcalz3zjj57bhs7g724wfpvzav2rlzvs8n7f"; depends=[dplyr leaflet maps plotly rbokeh rgdal sp spacetime xts]; }; geoTS = derive2 { name="geoTS"; version="0.1.3"; sha256="12v50r2ym3nb21sskq7h4xsk6nzci06l9iync2ny91iwl7c9nrjc"; depends=[doParallel ff foreach iterators raster sp]; }; - geoaxe = derive2 { name="geoaxe"; version="0.1.0"; sha256="043y7kb24hp66j7pnpqsdixvdmppwp72y8i4f8q7xrkhaqlfb93v"; depends=[jsonlite rgeos sp]; }; - geobr = derive2 { name="geobr"; version="1.4"; sha256="0507p6iy8jry6yic4ijiqymk92har6585z6qd7lp6g8rr48r94ws"; depends=[httr readr sf]; }; + geobr = derive2 { name="geobr"; version="1.6.1"; sha256="0cc2bbm13rc7323bd1n8723fz0hjaic199dnd2lny9fzv87ibw5q"; depends=[curl data_table httr readr sf]; }; geocacheR = derive2 { name="geocacheR"; version="0.1.0"; sha256="04ckxmird6n179xvsx50cjdz046igjxxqdnz5pfxi8pdklnky20c"; depends=[dplyr magrittr stringr threewords tibble]; }; + geocmeans = derive2 { name="geocmeans"; version="0.1.1"; sha256="0d9di8wd05k2dppfn0089l4g289vrzcayws54q992j8qn9phhb2r"; depends=[broom dplyr fclust fmsb future_apply ggplot2 progressr reldist reshape2 sp spdep]; }; geodaData = derive2 { name="geodaData"; version="0.1.0"; sha256="003m5wff0q4fdlg64qispmhj2aw83isxg3ijxwkwhvi33bpwpq4z"; depends=[]; }; geodetector = derive2 { name="geodetector"; version="1.0-4"; sha256="00zyx68jjl4mldah8mxfvwvv5yfkd4f1s2rlx6fsw6h8y2cwzj3l"; depends=[maptools rgdal rgeos sp]; }; geodimension = derive2 { name="geodimension"; version="1.0.0"; sha256="0mh16cdac7vi8zv98g3s06109fpadan441zd80x9yfsypx75sdz0"; depends=[dplyr generics magrittr pander readr rlang sf tibble tidyr tidyselect]; }; - geodist = derive2 { name="geodist"; version="0.0.6"; sha256="1fc5gi8076j0hylcbbcwgf7syqgnqsj1p9sn655paixjsipm5ixq"; depends=[]; }; - geodiv = derive2 { name="geodiv"; version="0.2.0"; sha256="173vi6zix358i06dimj8p16ph3jq0ddzi1ls4pv9qh0lk7x3a9ky"; depends=[dplyr e1071 phonTools pracma raster Rcpp RcppArmadillo rgdal rgeos sf sp spatial tibble zoo]; }; + geodist = derive2 { name="geodist"; version="0.0.7"; sha256="07mzxf4ngh34m4830sqnndhbdcvhgarpp46c6hmxsxwky6x5kp5k"; depends=[]; }; + geodiv = derive2 { name="geodiv"; version="1.0.1"; sha256="0lndh825db5jvnb7vhsj4nczc6q8j49ajhpq86rif5zm5d6bz5hd"; depends=[dplyr e1071 landscapemetrics phonTools pracma raster Rcpp RcppArmadillo rgdal rgeos sf sp spatial tibble zoo]; }; geodrawr = derive2 { name="geodrawr"; version="2.0.0"; sha256="05irfyfpk5lgsh0wax8dqdyfw4prynxz1bhs9k1nrz8yn2dd0imn"; depends=[leaflet sf shiny shinydashboard]; }; geoelectrics = derive2 { name="geoelectrics"; version="0.2.0"; sha256="1dmpaf16750ni4yr36cglfz9pv9jax8jxb3kwn47kxgnx3l8qq98"; depends=[fields lattice rgl]; }; geofabrik = derive2 { name="geofabrik"; version="0.1.0"; sha256="0k92gmivccw3kbgkb9bjw7pxc4zc3zdj35x0cbzmjq0k3qxq8ad0"; depends=[]; }; geofacet = derive2 { name="geofacet"; version="0.2.0"; sha256="1aylx2hwqk75y73az1zf0s5mjww77d7i9kafbkzw383f0i5qx42w"; depends=[geogrid ggplot2 ggrepel gridExtra gtable imguR rnaturalearth sf sp]; }; geofd = derive2 { name="geofd"; version="2.0"; sha256="1rsgy4nxfp1gi4vwh8zfzksr6sr2ga31kmd56q5m56gw530570ra"; depends=[fda]; }; + geofi = derive2 { name="geofi"; version="1.0.1"; sha256="147qxrlp9zj49778lxdlkg02zwwyrp7h3psfmp925i6ihh8dfx0i"; depends=[curl dplyr httpcache httr purrr rlang sf xml2 yaml]; }; geogenr = derive2 { name="geogenr"; version="1.0.0"; sha256="1qik37ns50pq4dvlj6irmls0pwgsw1dl54azdwfkqybkx95g0n7m"; depends=[data_table dplyr generics geomultistar httr magrittr pander purrr readr rlang sf snakecase starschemar stringr tibble tidyr tidyselect tm]; }; geogrid = derive2 { name="geogrid"; version="0.1.1"; sha256="0b8afwgj9x56z6zh525y7qkiwbv77mjcw3v19kfba0426jn4vi87"; depends=[Rcpp RcppArmadillo rgeos sf sp]; }; geohashTools = derive2 { name="geohashTools"; version="0.3.1"; sha256="0ks6ga1vsp5z7sy0xcq9nacffmfsx6yqdlnhqflsb8zb9qbygazf"; depends=[]; }; geojson = derive2 { name="geojson"; version="0.3.4"; sha256="0fvlw06hjb7z0mfsf8vhv1dchdjlvklyzjqlaydjzbwb1kvbhpq7"; depends=[jqr jsonlite lazyeval magrittr protolite sp]; }; - geojsonR = derive2 { name="geojsonR"; version="1.0.8"; sha256="015g1xpvbwgng5vh79q8gx6900skv3p7s2v3xbka08qllvsg5by1"; depends=[R6 Rcpp RcppArmadillo]; }; - geojsonio = derive2 { name="geojsonio"; version="0.9.2"; sha256="1m315vr0vw60g6j5i7x293szhji3d4p7f54hxmz1aqw4y7fkr8f6"; depends=[crul geojson jqr jsonlite magrittr maptools readr rgeos sf sp V8]; }; + geojsonR = derive2 { name="geojsonR"; version="1.1.0"; sha256="0yqmz5snl5mpkbp2m5nddvqy7y72kcpgzy3d5b55l4sfzh7wfg4d"; depends=[R6 Rcpp RcppArmadillo]; }; + geojsonio = derive2 { name="geojsonio"; version="0.9.4"; sha256="13lzc5hcs84gs1qnyi7lvy3yq1jz68jibmnww04lb91920msdxjv"; depends=[crul geojson geojsonsf jqr jsonlite magrittr maptools readr rgeos sf sp V8]; }; geojsonlint = derive2 { name="geojsonlint"; version="0.4.0"; sha256="0l6xlf6l9shyvdd2ghkhcgbkxpmycapfpxakzbvd92j1x8dmr9az"; depends=[crul jsonlite jsonvalidate V8]; }; geojsonsf = derive2 { name="geojsonsf"; version="2.0.1"; sha256="1gxzi0wqmrif6bkw7z21aa2j8i0bd7a5nyyrkjiybv7v7d1l1ps2"; depends=[geometries jsonify rapidjsonr Rcpp sfheaders]; }; - geoknife = derive2 { name="geoknife"; version="1.6.4"; sha256="026lgxklrf73zfc9j4x4as8f0dbyq5j2prnkg2r570i6xic70bsy"; depends=[curl httr progress sp whisker xml2]; }; + geoknife = derive2 { name="geoknife"; version="1.6.5"; sha256="1w1mznwpvx4z3qi3g4b83qkrblb2sab7zz5a4r0l8japlwhff9nn"; depends=[curl httr progress sp whisker xml2]; }; geomapdata = derive2 { name="geomapdata"; version="1.0-4"; sha256="1g89msnav87kim32xxbayqcx1v4439x4fsmc8xhlvq4jwlhd5xxw"; depends=[]; }; geomedb = derive2 { name="geomedb"; version="2.0.1"; sha256="1l35c9x1mhqd7z5ragd7w3ay8v2fdnbmbfx9grwi622j8yz1fbmq"; depends=[ape httr jsonlite]; }; geomerge = derive2 { name="geomerge"; version="0.3.2"; sha256="1i6n88k8icwihr9w7ipjb50f68zad602dipb3hd887y4kyf14wni"; depends=[geosphere ggplot2 gridExtra inlmisc lubridate raster scales sp spdep]; }; geometa = derive2 { name="geometa"; version="0.6-3"; sha256="0bj1yg1wfcvq24w85cim6hx8qpi2hj7frdz1fwzhlnxnwkwyk8ip"; depends=[httr jsonlite R6 XML]; }; - geometr = derive2 { name="geometr"; version="0.2.5"; sha256="1rsymlszy452bips1rfpr8crsbw4wlm7m83j68n1f5i3m70qp1d1"; depends=[checkmate crayon deldir dplyr raster Rcpp readr rgdal rlang sf sp spatstat tibble]; }; + geometr = derive2 { name="geometr"; version="0.2.8"; sha256="0ylsz3i435q6pfbkpjxh2bwsjphn8i7iynjarxw77qyhy4f7ac44"; depends=[checkmate crayon deldir dplyr raster Rcpp readr rgdal rlang sf sp spatstat tibble]; }; geometries = derive2 { name="geometries"; version="0.2.0"; sha256="05036q4dccmmd955g4n2s5ncc9zxd9v9qyamszszwn147i7hkxcc"; depends=[Rcpp]; }; geometry = derive2 { name="geometry"; version="0.4.5"; sha256="1n10l8ax3783v3lgaacb15qsn8b3f0wpmhg3k39j31s6ciyd3vcg"; depends=[linprog lpSolve magic Rcpp RcppProgress]; }; geomnet = derive2 { name="geomnet"; version="0.3.1"; sha256="0m5qkbxbrx39v9pwh74c01g8abqwbmphk38h3yxgslyqsrpnpn4l"; depends=[dplyr ggplot2 network plotly readr sna tidyr]; }; - geomorph = derive2 { name="geomorph"; version="3.3.1"; sha256="1pj67f329j4zaan4paa9xp0d3cfd00bvs1al8356niz9sc373l4l"; depends=[ape jpeg rgl RRPP]; }; + geomorph = derive2 { name="geomorph"; version="4.0.0"; sha256="0y6mz5ssgpj88gzwrlkyhclk5fcq0hi5ghr098s8x76mvj06hmb6"; depends=[ape ggplot2 jpeg Matrix rgl RRPP]; }; geomultistar = derive2 { name="geomultistar"; version="1.1.0"; sha256="1cgka5gx5hkj0y6mdkl2hn13x508nn8xkw2jn5d41nr6xii3axp0"; depends=[dplyr magrittr pander rgdal rlang RSQLite sf snakecase starschemar stringr tibble tidyr tidyselect]; }; geonames = derive2 { name="geonames"; version="0.999"; sha256="0yz1b7y3vwa4izrhpry4n3iwzb7y67s5p3kgnd7d29cl5pcbpmqx"; depends=[rjson]; }; geonapi = derive2 { name="geonapi"; version="0.4"; sha256="045lrj5qmd3m2ja8i9446d7vz8lmdz8wvm4f3a72cm18xaan1m2p"; depends=[geometa httr keyring openssl R6 XML]; }; geonetwork = derive2 { name="geonetwork"; version="0.3"; sha256="0qjnv91rcxzw44fmbgm4qpcrbj5qgz1lgmyw53imyhxgyv55awxv"; depends=[geosphere igraph rgdal sf sp]; }; - geoops = derive2 { name="geoops"; version="0.3.0"; sha256="1f54y1j1gbr2cf3c4yving5x9pvnmjb6wd92y4vacjfgms7s9bkz"; depends=[Rcpp]; }; geophys = derive2 { name="geophys"; version="1.4-1"; sha256="1s64sbr0chv0z2vaw059khfkv8iga1kr6428kkglgafq5x2d6h3q"; depends=[cluster GEOmap RFOC RPMG RSEIS]; }; georob = derive2 { name="georob"; version="0.3-13"; sha256="1ddynk8ss5jslxrwz7rg650d05qa5sh5qc3rzkrq8s4hpvw1zqgw"; depends=[abind constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; - geos = derive2 { name="geos"; version="0.0.1"; sha256="13kwmangzzs1ksk6slib1ym1fgdj0rggwfikrga06zyr959isz6m"; depends=[libgeos]; }; + geos = derive2 { name="geos"; version="0.1.0"; sha256="1pxq6x7xws5ka1fclfrbxigiqmhq5raadb6mr4rj898d2w2wqcsm"; depends=[libgeos wk]; }; geosapi = derive2 { name="geosapi"; version="0.5"; sha256="0pkyblhxhx87mcql2v07df0hxaksk126ywik6dxyk44h3krz5y4g"; depends=[httr keyring openssl R6 XML]; }; geoscale = derive2 { name="geoscale"; version="2.0"; sha256="0gisds0in32xhw54fxfyxvwxgrfjs871wmqf6l915nr896rlx0bm"; depends=[]; }; geosed = derive2 { name="geosed"; version="0.1.1"; sha256="07j4q6sgrf83h2gi2j5qap5rifz8gimdacd3b7ld1p3b6ai6kv3r"; depends=[]; }; @@ -8940,19 +9295,19 @@ in with self; { geosphere = derive2 { name="geosphere"; version="1.5-10"; sha256="15xlgsmn0vwky1l13n6acdz6jn2b2na3gf6x367y3qh1f5w4zkan"; depends=[sp]; }; geospt = derive2 { name="geospt"; version="1.0-2"; sha256="1814nn0naxvbn0bqfndpmizjbqcs6rm87g2s378axkn6qpii4bh8"; depends=[fields genalg gsl gstat limSolve MASS minqa plyr sgeostat sp TeachingDemos]; }; geosptdb = derive2 { name="geosptdb"; version="0.5-0"; sha256="0m0dlazhq2za71mi3q8mz2zvz7yrmda7lha02kh9n820bx89v33z"; depends=[FD fields geospt gsl limSolve minqa sp StatMatch]; }; - geostatsp = derive2 { name="geostatsp"; version="1.8.2"; sha256="06rv4mwzk5rmyp11f0w97ylkcdd3pizzy8gwkmvxzi8hprz5w3ln"; depends=[abind Matrix numDeriv raster sp]; }; + geostats = derive2 { name="geostats"; version="1.3"; sha256="1k999b8dgwvajialsbijscndvbbm4hvvdlmycn8xwbbiqdz074ms"; depends=[]; }; + geostatsp = derive2 { name="geostatsp"; version="1.8.5"; sha256="1vclwzvr3mbzp2m7v0wq1dn7xhay4h5i0sfqalywpzyy8wj433w0"; depends=[abind Matrix numDeriv raster sp]; }; geotech = derive2 { name="geotech"; version="1.0"; sha256="18s7w6h1svc4n1hcgj5njfkf3nflkc53cdwsq5112p3442rlz33f"; depends=[]; }; geotools = derive2 { name="geotools"; version="0.1"; sha256="0d0vf9dvrrv68ivssp58qzaj8vra26ms33my097jmzmgagwy1spd"; depends=[]; }; geotoolsR = derive2 { name="geotoolsR"; version="1.1"; sha256="162s37j7wh14h91b6acn453bvgpk3cakfi7mgrdvr5bjdqqn7j7v"; depends=[dplyr geoR ggplot2 tidyr]; }; geotopbricks = derive2 { name="geotopbricks"; version="1.5.4"; sha256="1mn15mchxkv9qqjrcsyx0pf56sdz0ba7i5jd1ci1ilr6rig81ckz"; depends=[raster rgdal stringr zoo]; }; geouy = derive2 { name="geouy"; version="0.2.3"; sha256="11jxy73f53wlwnnzhm3d3yfvf3kbh6lnpl5c94amfqvf79k9m9vi"; depends=[assertthat dplyr fs ggplot2 ggspatial ggthemes glue magrittr RCurl rlang sf stringr testthat viridis]; }; geoviz = derive2 { name="geoviz"; version="0.2.2"; sha256="1wx1p72532xpg6y3rlrvaiwx57xad3d9fvy9mbadvj418xwxnmim"; depends=[abind chron curl dplyr ggplot2 glue magrittr png progress purrr raster readr rgdal rgeos rgl rlang sf slippymath sp stringr tibble tidyr]; }; - geozoning = derive2 { name="geozoning"; version="1.0.0"; sha256="0cqdi2jgqrxc339qkr57dp11jp40x99f9inwamnh7ymg2q7kq14s"; depends=[deldir fields ggplot2 gstat maptools RandomFields raster rgeos sp]; }; geozoo = derive2 { name="geozoo"; version="0.5.1"; sha256="0g91yhg7zw1bp0lxxblr2irckjg2rl4pg1vgglccnmxkzn0ji2qi"; depends=[bitops]; }; gepaf = derive2 { name="gepaf"; version="0.1.1"; sha256="0n36w40jrq3qkgmhz9wrnhp6fczw7bm96g950sa4nq33872xhfgm"; depends=[bitops]; }; - germanpolls = derive2 { name="germanpolls"; version="0.3"; sha256="1ck3klc8925mpnrplxpvz376avivil1w0jzcrrlgssawyvfbhgc8"; depends=[dplyr magrittr purrr RCurl readr xml2]; }; - germinationmetrics = derive2 { name="germinationmetrics"; version="0.1.4"; sha256="17183i7nylvrh8rz916q7xg1k9c8z7z03knpisnrcasa49s07mqq"; depends=[broom data_table ggplot2 ggrepel mathjaxr minpack_lm plyr Rdpack]; }; - gert = derive2 { name="gert"; version="1.0.2"; sha256="1lq4hgv2727lwcv8vha5af26nslj99rjxjrgflshmmcihawpls1n"; depends=[askpass credentials openssl rstudioapi zip]; }; + gerbil = derive2 { name="gerbil"; version="0.1.5"; sha256="1rvf7z7zj04p2faj41fxxjs20bd3ghr6fbzkkapcx48fr4j9skj2"; depends=[DescTools lattice MASS mvtnorm openxlsx pbapply truncnorm]; }; + germinationmetrics = derive2 { name="germinationmetrics"; version="0.1.5"; sha256="1gazx0k4nhb9xsyqi0zxdzg9a0kfvf7g1gka7lgaj2f3bpyk0gd3"; depends=[broom data_table ggplot2 ggrepel mathjaxr minpack_lm plyr Rdpack]; }; + gert = derive2 { name="gert"; version="1.3.0"; sha256="1fh72p92wj83yv1ch77jms6k1gjqfji8cmgw23vpxd0p8l9jj4h7"; depends=[askpass credentials openssl rstudioapi sys zip]; }; gesca = derive2 { name="gesca"; version="1.0.4"; sha256="1ndn8wgp22pr017x6v7jw8jy4gd06x8110qa860hw8i6pn47wfwv"; depends=[]; }; gesisdata = derive2 { name="gesisdata"; version="0.1.0"; sha256="02xjpw41gm3778lj01kcwjx0lr1i95a0wlrfvs0r5xlajq13jr67"; depends=[dplyr magrittr rio RSelenium stringr]; }; gestalt = derive2 { name="gestalt"; version="0.1.8"; sha256="1cb04rd3yvkd47byynrn0pq6brlsi2z2iavh4gfrwmqyvks34k51"; depends=[rlang]; }; @@ -8960,7 +9315,6 @@ in with self; { gesttools = derive2 { name="gesttools"; version="1.0.1"; sha256="1kyhmzdzviyx2d52342xnblikvpv04q71fjix9mx2ysb1xbb4yxa"; depends=[DataCombine geeM magrittr nnet rsample tibble tidyr tidyselect]; }; getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.3.2"; sha256="1z7j4zypxlj17q0qjpzhmrcg6qv848nbbfz1m0rhv1b1bd3qwgsq"; depends=[curl data_table hoardr raster tibble]; }; getDTeval = derive2 { name="getDTeval"; version="0.0.1"; sha256="0viifs5n6hrns313ihgdbxcmsnl666bqbd0x30i4y6qmc2wqn2fs"; depends=[data_table microbenchmark]; }; - getLattes = derive2 { name="getLattes"; version="0.1.1"; sha256="0c6sbvpk3gy0x9d3pxk1z98q6jid5xdylp8zg2f6ba7nw6yyv5cm"; depends=[dplyr pipeR rlang rlist stringi stringr tibble XML]; }; getMet = derive2 { name="getMet"; version="0.3.2"; sha256="0j1h1vy8rd7czpnb4msdb9k560pnh7kjkmpqqwzwin2ms1c0mggb"; depends=[EcoHydRology jsonlite]; }; getPass = derive2 { name="getPass"; version="0.2-2"; sha256="03ydafhh0sk3rcnpr3paajyji64x2ddp6p814p9mvbmyrblcgzcc"; depends=[rstudioapi]; }; getProxy = derive2 { name="getProxy"; version="1.12"; sha256="0qcxihgwy3h2b98z2hwjszwqbz117d89xjys7fy0f8m9hv7rf6ph"; depends=[bitops data_table dplyr httr jsonlite RCurl]; }; @@ -8969,7 +9323,7 @@ in with self; { getlandsat = derive2 { name="getlandsat"; version="0.2.0"; sha256="15450v93lc4i2qda0zlb5vplwbarkmf3f6sb4rlrdpv9vlj85hff"; depends=[crul data_table rappdirs readr tibble xml2]; }; getmstatistic = derive2 { name="getmstatistic"; version="0.2.1"; sha256="0jbg668kwkvnzgk6678w000mijch28ni9rr5b9c1l9icwcsphmlc"; depends=[ggplot2 gridExtra gtable metafor psych stargazer]; }; getopt = derive2 { name="getopt"; version="1.20.3"; sha256="0zzmzgwl9a4y3s34600vmih22d6y32294f9bvxrnmffnvkgmy7sk"; depends=[]; }; - gets = derive2 { name="gets"; version="0.26"; sha256="1y24d2div0nky53qprac1aq4y0i1bnvn16wqslam1r04lzzjcg21"; depends=[zoo]; }; + gets = derive2 { name="gets"; version="0.27"; sha256="07y2x9xz1pvsxq1nsz1yyi5mxwrj64c8ivxl5d29arn8xa38ac16"; depends=[zoo]; }; getspres = derive2 { name="getspres"; version="0.1.1"; sha256="1k69b7by1398pc9knp97r3k6pv8hixzianqal71ggdrwsb3n1gis"; depends=[colorRamps colorspace dplyr metafor plotrix RColorBrewer]; }; gettz = derive2 { name="gettz"; version="0.0.4"; sha256="1j83pdny3phfflkdjwiflyfvighn73pysw5bac4hx079dda8k25g"; depends=[]; }; gexp = derive2 { name="gexp"; version="1.0-1"; sha256="1i3sarsawax1landjbm8gxrcrimwzdgrbybzipqwxdrmlgvxslqk"; depends=[jpeg mvtnorm png]; }; @@ -8978,17 +9332,19 @@ in with self; { gfer = derive2 { name="gfer"; version="0.1.10"; sha256="1y0ra8k7zka43ibiii16vbwnc3m1i77yc9zj8rhzhmvhajjwad3l"; depends=[circlize data_table ggplot2 ggrepel googlesheets gsheet httr jsonlite rvest scatterpie stringi tidyr V8 xml2]; }; gfiExtremes = derive2 { name="gfiExtremes"; version="1.0.0"; sha256="1ys7vrd5kpyqj42m384r2b91w53rlx6hcznpb0a0mnniqj4wc61r"; depends=[BH coda doParallel foreach Rcpp RcppArmadillo]; }; gfiUltra = derive2 { name="gfiUltra"; version="1.0.0"; sha256="1n6sp7h0ys92mqixznrs2j8kmban3mx8swrwdpxgxc6vxycky8d8"; depends=[lazyeval mvtnorm SIS]; }; - gfilinreg = derive2 { name="gfilinreg"; version="1.0.0"; sha256="18mmnaj8x2l0qy4b4gy2ia56532qpz34b5g21sraz1jg6q07xrfq"; depends=[arrangements BH data_table EigenR lazyeval Rcpp RcppEigen spatstat]; }; - gfilmm = derive2 { name="gfilmm"; version="2.0.2"; sha256="1zjm2cfbc103k7hk2q3cdv8xsdpgad7byd24zqlxj9h60pjrwhcb"; depends=[forcats lazyeval Matrix Rcpp RcppEigen rgr spatstat]; }; + gfilinreg = derive2 { name="gfilinreg"; version="2.0.1"; sha256="0x2mb3x1d0z3vylfasqyjypxn0gv3qk4nigkv6p5z5fb8wrvafx3"; depends=[BH data_table EigenR lazyeval memuse Rcpp RcppEigen spatstat spatstat_geom]; }; + gfilmm = derive2 { name="gfilmm"; version="2.0.3"; sha256="1sinhdlfyhz8wdv4pwi1j6dfa02bmp15x5asn5qhazp979nbbxrz"; depends=[forcats lazyeval Matrix Rcpp RcppEigen rgr spatstat spatstat_geom]; }; + gfilogisreg = derive2 { name="gfilogisreg"; version="1.0.1"; sha256="1484scn3ckh5cbazwpdspllip9pvjzp75qjg68ip1zbckz9ll6ji"; depends=[BH EigenR lazyeval rcdd Rcpp RcppArmadillo roptim spatstat spatstat_geom]; }; gfmR = derive2 { name="gfmR"; version="1.1-0"; sha256="0qzzbcra1fnbp0h31b1as20yhmqmi7p62xrhikj64an9avg9b277"; depends=[faraway nnet]; }; gfoRmula = derive2 { name="gfoRmula"; version="0.3.1"; sha256="1y1k5zwv06kc6qk7ki7x7c1618irvwd6iw26gs5n8lv8z3cifqmy"; depends=[data_table ggplot2 ggpubr nnet progress stringr survival truncnorm truncreg]; }; - gfonts = derive2 { name="gfonts"; version="0.1.1"; sha256="1nkg4mfmgysk0ibzyb4h3qqxwhb5m84n8ykk6v5hz087yarac32x"; depends=[crul glue htmltools jsonlite shiny usethis]; }; - gfpop = derive2 { name="gfpop"; version="1.0.2"; sha256="1qypzrgfpwh4wbk3x1l8jv64i684v5y0dbwjg8f3kbd0xmhjb4aw"; depends=[Rcpp]; }; + gfonts = derive2 { name="gfonts"; version="0.1.2"; sha256="06v73vmw8narl2ym36calb1xpv7xxw38gi2m08ha3c0jkl71jmw8"; depends=[crul glue htmltools jsonlite shiny usethis]; }; + gfpop = derive2 { name="gfpop"; version="1.0.3"; sha256="16h0v2jcydn95yb4pkba808hn20darq532yp7djqx1issr1fwqjr"; depends=[Rcpp]; }; gg_gap = derive2 { name="gg.gap"; version="1.3"; sha256="0m66050ryn31xmsmmikjsssllasvjdmp9yjbwfdwfpwdv106zn9h"; depends=[cowplot ggplot2]; }; ggBubbles = derive2 { name="ggBubbles"; version="0.1.4"; sha256="116rl8j0s9xwhh9jl5yj9fspkhv2zrirbx9247hhns9ngrdn4i3x"; depends=[dplyr ggplot2]; }; ggChernoff = derive2 { name="ggChernoff"; version="0.2.0"; sha256="09bh9isvx3hwwvg72fv6z3fvp8dimpbhvbp328z8amq8jjhph4vf"; depends=[ggplot2 scales]; }; ggDCA = derive2 { name="ggDCA"; version="1.1"; sha256="0jpg7n6nk2jgq668ff0l9zk26zk39abc74f6w5x8gf4zsb8y0zp9"; depends=[base_rms do ggplot2 rms set survival]; }; ggExtra = derive2 { name="ggExtra"; version="0.9"; sha256="18mbi6gblqmrsciad1d2c9ngllk6mayaqj43k40hjq9ydqnvjbgj"; depends=[colourpicker ggplot2 gtable miniUI R6 scales shiny shinyjs]; }; + ggOceanMaps = derive2 { name="ggOceanMaps"; version="1.0.9"; sha256="15qrzl448sdf4ghr6m9ida6qjjnwa7p853axrg35k6p36mg9bgd8"; depends=[dplyr ggplot2 ggspatial raster rgdal rgeos sf smoothr sp stars units]; }; ggPMX = derive2 { name="ggPMX"; version="1.1.2"; sha256="1lcfjj6k4y69zs0zr3xf3l2hz8mdjw0wqbw5p8mqjm24qkynqb9a"; depends=[assertthat data_table GGally ggplot2 gtable knitr magrittr R6 rmarkdown stringr yaml zoo]; }; ggQC = derive2 { name="ggQC"; version="0.0.31"; sha256="1j9cs97hcj5zmqvn5rjr3gl0b9748s3pv2nb7v66dsyjdwvj7wyy"; depends=[dplyr ggplot2 tidyr]; }; ggQQunif = derive2 { name="ggQQunif"; version="0.1.5"; sha256="0vrxmqxy946mwdq0mb2m1ch41r0chrw7hcn18dr3mp10bv7pl7wj"; depends=[dplyr ggplot2 scales]; }; @@ -8996,8 +9352,7 @@ in with self; { ggRandomForests = derive2 { name="ggRandomForests"; version="2.0.1"; sha256="0f8m0j79d8wbac14zk1s8812rz6vgf04bz1iqq8p4d3sxwnvaj7q"; depends=[ggplot2 randomForest randomForestSRC survival tidyr]; }; ggResidpanel = derive2 { name="ggResidpanel"; version="0.3.0"; sha256="1vsjw229pd36100ix1sgfmk5lb9b0fx3l6pxg1irsfhm2ypbg1ig"; depends=[cowplot ggplot2 MASS plotly qqplotr stringr]; }; ggThemeAssist = derive2 { name="ggThemeAssist"; version="0.1.5"; sha256="1biw91a8p13h62v4w3yim6ghr98khmyhb3qd0h04asf91vvmpxbv"; depends=[formatR ggplot2 miniUI rstudioapi shiny]; }; - ggTimeSeries = derive2 { name="ggTimeSeries"; version="1.0.1"; sha256="12gi0zfl8g3x78skpkhska8b3z1pp636shrbx33rkq0iacsipqga"; depends=[data_table ggplot2]; }; - ggVennDiagram = derive2 { name="ggVennDiagram"; version="0.3"; sha256="1jgxzb3iffhx6xyn14nldljkaangdvzrxzfkibsb6g787fgv8ng9"; depends=[dplyr ggplot2 sf VennDiagram]; }; + ggVennDiagram = derive2 { name="ggVennDiagram"; version="1.0.7"; sha256="0qpzqf0x7is5xphlq0yqv1zpi073yq8zd2i078d5kbx1ch5c93p0"; depends=[dplyr ggplot2 magrittr plotly purrr RVenn sf stringr tibble tidyr]; }; ggallin = derive2 { name="ggallin"; version="0.1.1"; sha256="0hrxa7m07ppvnndivxcgxksdyblb6fw17aw46maqavlvcrz3fjgm"; depends=[ggplot2 scales]; }; ggalluvial = derive2 { name="ggalluvial"; version="0.12.3"; sha256="0mkan9gxg3yxjism22yxbhvlh2lh7wpbrqpb355za790prcmjbh3"; depends=[dplyr ggplot2 lazyeval rlang tidyr tidyselect]; }; ggalt = derive2 { name="ggalt"; version="0.4.0"; sha256="0ssa274d41vhd6crzjz7jqzbwgnjimxwxl23p2cx35aqs5wdfjpc"; depends=[ash dplyr extrafont ggplot2 gtable KernSmooth maps MASS plotly proj4 RColorBrewer scales tibble]; }; @@ -9010,36 +9365,39 @@ in with self; { ggcharts = derive2 { name="ggcharts"; version="0.2.1"; sha256="1c0gdn8skkm82f3qxv9551l36zwqcga9b9sbc48q8hp71ay4ac6b"; depends=[colorspace dplyr ggplot2 lifecycle magrittr patchwork rlang]; }; ggconf = derive2 { name="ggconf"; version="0.1.3"; sha256="0g4xasqhdiqfqahakv6p5npl56f2iakx4bnc9v9zcjr077kdda4n"; depends=[ggplot2 rly]; }; ggcorrplot = derive2 { name="ggcorrplot"; version="0.1.3"; sha256="0hi9lz121ya1l2lbm7rqlxg6fs6bvxck396dngnidrhl5fvqb41b"; depends=[ggplot2 reshape2]; }; - ggdag = derive2 { name="ggdag"; version="0.2.2"; sha256="0gv7gf2bbrd0m1hjvk6j39ckyvxn5lj749q4fzlzzc5mxr3qdfyz"; depends=[dagitty dplyr forcats ggplot2 ggraph ggrepel igraph magrittr pillar purrr stringr tibble tidygraph]; }; + ggdag = derive2 { name="ggdag"; version="0.2.3"; sha256="12w02bflcn0b96ybjy3afnls8vfwwpxd0w9yn19hva2my654cl64"; depends=[dagitty dplyr forcats ggplot2 ggraph ggrepel igraph magrittr pillar purrr stringr tibble tidygraph]; }; ggdark = derive2 { name="ggdark"; version="0.2.1"; sha256="1w93g2j4g45x9s841v9zi18lxzda81ipa13fajqc6p9xk8frvgrf"; depends=[ggplot2]; }; ggdemetra = derive2 { name="ggdemetra"; version="0.2.2"; sha256="1j0nwmv2acyrkpn230jj6yf5nnl40kpqdqaglrnrfqw5rp357krp"; depends=[ggplot2 ggrepel gridExtra RJDemetra]; }; ggdendro = derive2 { name="ggdendro"; version="0.1.22"; sha256="0skbj487b6f6pj2iz4yq2b9gbgb39cv5dyzhdl3w7ay1k0s5z9ph"; depends=[ggplot2 MASS]; }; - ggdist = derive2 { name="ggdist"; version="2.3.0"; sha256="1lsmja1plrwf1wl87wj8czjr2217mzvs6amd9pxgagrbw8qrqf0h"; depends=[distributional dplyr fda forcats ggplot2 HDInterval purrr rlang scales tibble tidyr tidyselect vctrs]; }; + ggdist = derive2 { name="ggdist"; version="2.4.0"; sha256="0m8w4zjm1qhh3np11dpxvqqs4cxv13hg9rq5jlf4sy4dg2akxl2n"; depends=[distributional dplyr fda forcats ggplot2 HDInterval purrr rlang scales tibble tidyr tidyselect vctrs]; }; ggdmc = derive2 { name="ggdmc"; version="0.2.6.0"; sha256="1gncv7npl548k3zd41x2gwg5qywn5rp6zb4i7ga78sy77mvi3x92"; depends=[coda data_table ggplot2 matrixStats Rcpp RcppArmadillo]; }; gge = derive2 { name="gge"; version="1.6"; sha256="0l5xhbn3wdvsmr8gavj8r3yn8mcfw21pmzdfy4wygqa6jamcsr59"; depends=[nipals reshape2]; }; - ggeasy = derive2 { name="ggeasy"; version="0.1.2"; sha256="06rynzv6vqngay5cjrig550dfada66075qs69l4rpfqci0vh05km"; depends=[ggplot2 rlang]; }; + ggeasy = derive2 { name="ggeasy"; version="0.1.3"; sha256="0zp9jhm8vc1gpja5s6g92snd1jnskadafc226l51y8cps7lj8f6q"; depends=[ggplot2 rlang]; }; ggedit = derive2 { name="ggedit"; version="0.3.1"; sha256="10fbjqq6l7wfibi65mq423w7v8gymr541if749qhsnd9b2jyhaj5"; depends=[colourpicker dplyr ggplot2 magrittr miniUI plyr purrr rlang rstudioapi scales shiny shinyAce shinyBS tidyr]; }; - ggeffects = derive2 { name="ggeffects"; version="1.0.1"; sha256="1c5rvycaqp7zp1j6j17c84v8nlpi0w7bhfxmcha4n37m0snk1kgy"; depends=[insight MASS sjlabelled]; }; + ggeffects = derive2 { name="ggeffects"; version="1.1.0"; sha256="1qb9d7nfs1hkgxhr6pkdrxxx7f8ar8g3si95bsm7wgl94xf2d8di"; depends=[insight MASS sjlabelled]; }; ggenealogy = derive2 { name="ggenealogy"; version="1.0.1"; sha256="19six9ln1yaqv268abm9qvb61nl8zdz3gghwr8hmwsa94xwhzhkq"; depends=[ggplot2 igraph plotly plyr reshape2 tibble]; }; ggetho = derive2 { name="ggetho"; version="0.3.6"; sha256="1iv0vad8y85bvz8rx0flqyrb38d79j9fhmd6ay5siyccigi88clj"; depends=[behavr data_table ggplot2 labeling rlang scales stringr]; }; ggfan = derive2 { name="ggfan"; version="0.1.3"; sha256="1p3hbznpsaznlk0lnjyazc130www0p5919qplg3kspng7qh8p22w"; depends=[colorspace dplyr ggplot2 rstan]; }; - ggfittext = derive2 { name="ggfittext"; version="0.9.0"; sha256="1jfzlyi0ss5ymzinllarzx5liyhw80n5ngbhrxv582c140hz0mr3"; depends=[ggplot2 shades stringi]; }; + ggfittext = derive2 { name="ggfittext"; version="0.9.1"; sha256="0yckj6awx42yrlv7lfq9jplnzqv5lpvgmb0327bx14pc3q36055f"; depends=[ggplot2 shades stringi]; }; ggfocus = derive2 { name="ggfocus"; version="1.0.0"; sha256="03q0rz7flm8sc8hrlkcm5fz66qiyxb8z8q4bh9dglhw0jc8q1fvb"; depends=[dplyr ggplot2 magrittr RColorBrewer rlang]; }; - ggforce = derive2 { name="ggforce"; version="0.3.2"; sha256="1lplxyq5bgx90dgaimhynpcywag1gp6vlsy7q52ay1nfc35qmkjc"; depends=[ggplot2 gtable MASS polyclip Rcpp RcppEigen rlang scales tidyselect tweenr withr]; }; - ggformula = derive2 { name="ggformula"; version="0.9.4"; sha256="04vdhg1bbc1psrx9ggaphz7cx4fw5xsmhkqpqfcg2w4ba2bjy46f"; depends=[ggforce ggplot2 ggstance magrittr mosaicCore rlang stringr tibble]; }; + ggforce = derive2 { name="ggforce"; version="0.3.3"; sha256="0bwzjbjl678xvc2ihm80dwn9pidwafqjdab3k299csys16s3na1a"; depends=[ggplot2 gtable MASS polyclip Rcpp RcppEigen rlang scales tidyselect tweenr withr]; }; + ggformula = derive2 { name="ggformula"; version="0.10.1"; sha256="1ph5jd8svk8hmshi894vmmpq3zwgdmf4yn3gmdlkad68z8jynhsp"; depends=[ggforce ggplot2 ggridges ggstance labelled magrittr mosaicCore rlang scales stringr tibble]; }; ggfortify = derive2 { name="ggfortify"; version="0.4.11"; sha256="1wfm7l9bz6msh7rflgfv9dgbxh1ikz2ay0v7sgk9nkc24y6lhbpk"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; + ggfx = derive2 { name="ggfx"; version="1.0.0"; sha256="1q9ppp88yj6lplj7wxnf18aa7a8f5iz35765bdfhsrkdxlrkny7h"; depends=[ggplot2 gtable magick ragg rlang]; }; gggap = derive2 { name="gggap"; version="1.0.1"; sha256="1iidxm7qcrg0isw2q27cmjbfb3pkfj5jcg1nj8lgy6xmydw3vrw3"; depends=[cowplot ggplot2]; }; gggenes = derive2 { name="gggenes"; version="0.4.1"; sha256="1s4knz2g06w46jbi037l9ii0kkxvl7gnljp54s4z36hnswsrv8jk"; depends=[ggfittext ggplot2 rlang]; }; ggghost = derive2 { name="ggghost"; version="0.2.1"; sha256="0kvsjadxxdf6yvzk4a6yqkg02q1ysslvf3m0a369bdim396z4hnv"; depends=[animation ggplot2]; }; - gggibbous = derive2 { name="gggibbous"; version="0.1.0"; sha256="1g6igmj2nh4b516p1wcs1cwgzdnawvf3snxzwxjkmdc4yqbzyz24"; depends=[ggplot2 scales]; }; + gggibbous = derive2 { name="gggibbous"; version="0.1.1"; sha256="1sy9d9hl04b13yz4563bzsdznjdh3xmikdrsqg8kdv8wn481lqbd"; depends=[ggplot2 scales]; }; ggguitar = derive2 { name="ggguitar"; version="0.1.1"; sha256="1lmfs54h91gzcxin37v4flkywbq3fs648mm1h9ak03xlj5nagzsi"; depends=[dplyr ggplot2 gridExtra lazyeval readr tibble]; }; + ggh4x = derive2 { name="ggh4x"; version="0.1.2.1"; sha256="1a3aiyc1shw5hlf3m90dc528dsx4li6mqrh9g5i7s353yck226mj"; depends=[ggplot2 gtable rlang scales vctrs]; }; gghalfnorm = derive2 { name="gghalfnorm"; version="1.1.2"; sha256="1sy0m6pqmnjbqv60rljyblhis0dxwkhw751jhlad5arcgrcwf4k8"; depends=[ggplot2 ggrepel]; }; gghalves = derive2 { name="gghalves"; version="0.1.1"; sha256="1w4j8grir1i8ar7fdsk4f6czkl5j2wwn67y746mis2diwnzhcil3"; depends=[ggplot2 gtable]; }; gghighlight = derive2 { name="gghighlight"; version="0.3.1"; sha256="1w15g67bh5cz0y12lb115bppmff9ayyrk76alxd6aznz534sbc5i"; depends=[dplyr ggplot2 ggrepel lifecycle purrr rlang tibble]; }; + gghilbertstrings = derive2 { name="gghilbertstrings"; version="0.3.3"; sha256="0b3xp1w6fkkmjh7gihhfkp4npx553a75bvsal3w4j57xa34l8rap"; depends=[dplyr ggplot2 lifecycle magrittr Rcpp rlang tibble]; }; ggimage = derive2 { name="ggimage"; version="0.2.8"; sha256="0p2bbcw1fwzpfnmdq2h9h18xka9jrzfd2v705rbniv8nas0ga14d"; depends=[ggplot2 ggplotify jsonlite magick rvcheck scales tibble]; }; ggimg = derive2 { name="ggimg"; version="0.1.0"; sha256="0lgak04690xvy0j1g8rgbj9x81ychkx6hp1f8d92piz432wb1z71"; depends=[abind ggplot2 jpeg png]; }; gginference = derive2 { name="gginference"; version="0.1.3"; sha256="1r960cglnkii8xih4r1r7wd857jqn53f08zi9dnj54bpqrs374zx"; depends=[ggplot2 rlang]; }; - gginnards = derive2 { name="gginnards"; version="0.0.3"; sha256="15ly88wjsd2fqvp483376rm2fczcbmj1s1vagb70z9z7968407xy"; depends=[ggplot2 magrittr rlang stringr tibble]; }; + gginnards = derive2 { name="gginnards"; version="0.0.4"; sha256="1f6j9ax0lh7bbcjrzqsxqh5csd8pz8hqmkb5p62knzgn2pq7y17z"; depends=[ggplot2 magrittr rlang stringr tibble]; }; ggip = derive2 { name="ggip"; version="0.2.0"; sha256="0jfh6sr34nbqwqypx6qdjggl2q6qbmpl17cmy45v6zdr5phrzhrx"; depends=[dplyr ggplot2 glue ipaddress Rcpp rlang tidyr vctrs]; }; ggiraph = derive2 { name="ggiraph"; version="0.7.8"; sha256="0iz2v73m8sm80k2vb62ajrirsh00g680938gp6haybq4s61imdki"; depends=[gdtools ggplot2 htmltools htmlwidgets purrr Rcpp rlang uuid]; }; ggiraphExtra = derive2 { name="ggiraphExtra"; version="0.3.0"; sha256="0q8ppixw5i1hpphmswpw6lvq7gx8rx4gfs2b8d31wbn32ziiv2rk"; depends=[dplyr ggiraph ggplot2 magrittr mgcv mycor plyr ppcor purrr RColorBrewer reshape2 scales sjlabelled sjmisc stringr tidyr]; }; @@ -9051,14 +9409,15 @@ in with self; { gglorenz = derive2 { name="gglorenz"; version="0.0.2"; sha256="1kag8p2chd0sbn8affpxzi4aawpm71ls97dwdgx7mxxfwkdb2q0y"; depends=[ggplot2 ineq]; }; ggm = derive2 { name="ggm"; version="2.5"; sha256="11wc6k2kj2ydy0dyks5mbvbhxm1r43id87anl1jg6dn0yv4m78di"; depends=[graph igraph]; }; ggmap = derive2 { name="ggmap"; version="3.0.0"; sha256="13dmzl6z62pzjiffilarkji46vy0sacxa8a7mhrhc3biq3ylzhln"; depends=[bitops digest dplyr ggplot2 glue httr jpeg magrittr plyr png purrr RgoogleMaps rjson scales stringr tibble tidyr]; }; - ggmcmc = derive2 { name="ggmcmc"; version="1.5.0"; sha256="0ywh7bzva5b5svgqgxq2ni59g3xcbvcm2rlgs1plsi1djx2jwsn5"; depends=[dplyr GGally ggplot2 tidyr]; }; - ggmix = derive2 { name="ggmix"; version="0.0.1"; sha256="19dp4ic3mxrqdzr0hi44fm2axfi2b693k4xfs28h664123c9kyvn"; depends=[glmnet MASS Matrix]; }; - ggmosaic = derive2 { name="ggmosaic"; version="0.2.0"; sha256="0byhp7125r015wbbnv6fq13bx38krf11r39jx9dzbr0ci6kqzkdb"; depends=[dplyr ggplot2 plotly productplots purrr rlang tidyr]; }; + ggmcmc = derive2 { name="ggmcmc"; version="1.5.1.1"; sha256="1y6ya2qihm8h6ds84akhmsxn9c8jriw03wakaqzsmi21agz87n21"; depends=[dplyr GGally ggplot2 tidyr]; }; + ggmix = derive2 { name="ggmix"; version="0.0.2"; sha256="158pzmr4vmy2qxmp3nrabjgkg11mrdvl1skzxgwida2is900f7gf"; depends=[glmnet MASS Matrix]; }; + ggmosaic = derive2 { name="ggmosaic"; version="0.3.3"; sha256="1zm1zfbd0qk6icw65m9hz1hgyqj632ibq3qilidvx5jy7jh8nbpy"; depends=[dplyr ggplot2 ggrepel plotly productplots purrr rlang scales tidyr]; }; ggmr = derive2 { name="ggmr"; version="0.1.1"; sha256="0941rvh7m5knlhp0m0mhm4j8spmch0pyvwhzs3bycq3vzlvzv1w7"; depends=[MASS]; }; - ggmsa = derive2 { name="ggmsa"; version="0.0.4"; sha256="1sxnzr39ns6r1h5xr5mwnqbksva156cyx3gc1yq5g3568l2kmx3j"; depends=[Biostrings ggplot2 magrittr stringr tidyr]; }; + ggmsa = derive2 { name="ggmsa"; version="0.0.6"; sha256="1iimrps235ax6zdmh1dxy9q4qs39280b5mbir93bynm4irh27r9l"; depends=[aplot Biostrings ggplot2 magrittr RColorBrewer stringr tidyr]; }; ggmuller = derive2 { name="ggmuller"; version="0.5.4"; sha256="0y7bm9fm5i8acpy6fa903ca2r9yasky7kg2hicm4xz5ni09jm20x"; depends=[ape dplyr ggplot2]; }; + ggmulti = derive2 { name="ggmulti"; version="1.0.1"; sha256="0hjrhccl8m7z18fdsda1blfw2gqg27sh4rv81x0ajkks86dgq2mw"; depends=[dplyr ggplot2 tidyr]; }; ggnetwork = derive2 { name="ggnetwork"; version="0.5.8"; sha256="1gdvywx2n4ph0dr8q1c5gfsmv4jjy0g41cnhjn68kkmg5fdc3ix8"; depends=[ggplot2 ggrepel igraph network sna]; }; - ggnewscale = derive2 { name="ggnewscale"; version="0.4.4"; sha256="0dazwhq1yjv3vdc0b0blzqfkic905w7fq8gnrixc9nwid9xc9cfg"; depends=[ggplot2]; }; + ggnewscale = derive2 { name="ggnewscale"; version="0.4.5"; sha256="1hjysfagd2lqy8yivqq9q7l6hbvyq8kasw3zqh5fk9xn18ikc702"; depends=[ggplot2]; }; ggnormalviolin = derive2 { name="ggnormalviolin"; version="0.1.2"; sha256="1gbv2b86nznw5bs05c4ns96b8hsxkhikhcf8syl2qbbafzy8vx6y"; depends=[dplyr ggplot2 magrittr scales]; }; ggnuplot = derive2 { name="ggnuplot"; version="0.1.0"; sha256="0i09ybmxdjyr15z1a651k3bkbqskri4ipcyjap93020zbfv05r9c"; depends=[ggplot2]; }; ggpacman = derive2 { name="ggpacman"; version="0.1.0"; sha256="1040d6aciyllrpszh7l7y55fw4dx8cya2yvj0x4i2fibvygz83p6"; depends=[dplyr gganimate ggforce ggplot2 magrittr purrr rlang tidyr]; }; @@ -9072,48 +9431,55 @@ in with self; { ggplot2movies = derive2 { name="ggplot2movies"; version="0.0.1"; sha256="067ld6djxcpbliv70r2c1pp4z50rvwmn1xbvxfcqdi9s3k9a2v8q"; depends=[]; }; ggplotAssist = derive2 { name="ggplotAssist"; version="0.1.3"; sha256="1g0s1dkbrxmwqjqppagdbnx24s0nbjn09xwxix3dkfssz6drhala"; depends=[dplyr editData gcookbook ggplot2 ggthemes magrittr miniUI moonBook rstudioapi scales shiny shinyAce shinyWidgets stringr tibble tidyverse]; }; ggplotgui = derive2 { name="ggplotgui"; version="1.0.0"; sha256="1yfglg5438mwyml845isimzma5q6824x19jka509ng49bzmf1za0"; depends=[ggplot2 haven plotly RColorBrewer readr readxl shiny stringr]; }; - ggplotify = derive2 { name="ggplotify"; version="0.0.5"; sha256="0pfnp4lrissf21z7867kdm6slr979kchyva8iaf83i1302kscph3"; depends=[ggplot2 gridGraphics rvcheck]; }; + ggplotify = derive2 { name="ggplotify"; version="0.0.6"; sha256="1xs9l05hzlrgcr0p0xah2b05fbm64ma3vfwzn4p8q6nj7xch1dbd"; depends=[ggplot2 gridGraphics rvcheck]; }; ggplotlyExtra = derive2 { name="ggplotlyExtra"; version="0.0.1"; sha256="1m2rhylpzj934gb50lxjp47rxz0kwl9i1p3n7w1rz4qi96pr5p1c"; depends=[ggplot2 plotly rlang]; }; - ggpmisc = derive2 { name="ggpmisc"; version="0.3.7"; sha256="121s6c9k4fn3rcz2myc1kxczllq2826c8zllaii58q8lica7dsyn"; depends=[broom dplyr ggplot2 glue gridExtra lubridate magrittr MASS plyr polynom rlang scales splus2R stringr tibble xts zoo]; }; + ggpmisc = derive2 { name="ggpmisc"; version="0.3.9"; sha256="0nb0lpwqph9334s9sq77mk3nd22icy9d9hywz4awhf6nvp5rcc2v"; depends=[dplyr generics ggplot2 glue gridExtra lubridate magrittr MASS plyr polynom rlang scales splus2R stringr tibble xts zoo]; }; ggpointdensity = derive2 { name="ggpointdensity"; version="0.1.0"; sha256="0c9a14j3b0hvamqylhzldw2hjdxmfbllwahjkf3gg2rw337ld9iy"; depends=[ggplot2]; }; ggpol = derive2 { name="ggpol"; version="0.0.7"; sha256="11xr26kwmkjjb51wm44ydv0vcinc6k6faqwx4s2faj4iwidlys1m"; depends=[dplyr ggplot2 glue gtable plyr rlang tibble]; }; ggpolypath = derive2 { name="ggpolypath"; version="0.1.0"; sha256="0g9zfal3vqcx16fi4abxm6l5sam475lk1f6bdik487wc2v0dkq83"; depends=[ggplot2]; }; + ggprism = derive2 { name="ggprism"; version="1.0.2"; sha256="19kb5ra4g7mbhlrbhhlhhyav9bz68kjdvazjyhhvnvpp2il0w85j"; depends=[digest ggplot2 glue gtable rlang scales tibble]; }; ggpubr = derive2 { name="ggpubr"; version="0.4.0"; sha256="0x86lmghr25k8w90yrp360dn42dhp5cjvjpdiv2s2gxfn701xcmb"; depends=[cowplot dplyr ggplot2 ggrepel ggsci ggsignif glue gridExtra magrittr polynom purrr rlang rstatix scales tibble tidyr]; }; ggpval = derive2 { name="ggpval"; version="0.2.4"; sha256="0zi3k79iy8pwnrgi9r9l4r9ghv1db9cxsagif8wsrlak4nr8akza"; depends=[data_table ggplot2]; }; - ggquickeda = derive2 { name="ggquickeda"; version="0.1.9"; sha256="1z9dmiyxmbryr4hzndanz72k57z469fbsxpfaaqzfrc3wx5yp30a"; depends=[colourpicker dplyr DT Formula GGally ggplot2 ggpmisc ggpubr ggrepel ggstance gridExtra Hmisc lazyeval markdown plotly quantreg rlang RPostgres scales shiny shinyFiles shinyjqui shinyjs stringr survival survminer table1 tidyr]; }; + ggquickeda = derive2 { name="ggquickeda"; version="0.2.0"; sha256="12bpsd54gscs66paz9jwxzmffrda3b91la9q7s77cjrcjcz3115i"; depends=[colourpicker dplyr DT Formula GGally ggbeeswarm ggplot2 ggpmisc ggpubr ggrepel ggstance gridExtra Hmisc markdown plotly quantreg rlang RPostgres scales shiny shinyFiles shinyjqui shinyjs stringr survival survminer table1 tidyr zoo]; }; ggquiver = derive2 { name="ggquiver"; version="0.2.0"; sha256="1hsayqxf4brck1rx97yyprw1axc83lksgf7mn3rh8hqx4h1f5f0f"; depends=[dplyr ggplot2]; }; - ggraph = derive2 { name="ggraph"; version="2.0.4"; sha256="1j3xf4fsv0i0gbppdrw4yprfyk53wx6s8nvnkipi2ywbm7cr4q4w"; depends=[digest dplyr ggforce ggplot2 ggrepel graphlayouts gtable igraph MASS Rcpp rlang scales tidygraph viridis withr]; }; + ggraph = derive2 { name="ggraph"; version="2.0.5"; sha256="0m4n8iw2b9jk8hcy5blg5w59zsqcpsbv27wbw598dvljpafx8sp3"; depends=[digest dplyr ggforce ggplot2 ggrepel graphlayouts gtable igraph MASS Rcpp rlang scales tidygraph viridis withr]; }; ggraptR = derive2 { name="ggraptR"; version="1.3"; sha256="1i6jp0n1sz5b4sv3d4h5624zhlknih2qp6p2m2ri6s3gsh1pl9zz"; depends=[dplyr ggplot2 pacman purrr shiny]; }; ggrasp = derive2 { name="ggrasp"; version="1.0"; sha256="0lini89mcxl30kx38vny9896hdf4afrz5dgivbbikkb2yyfh2cq1"; depends=[ape bgmm colorspace ggplot2 mixtools]; }; - ggrastr = derive2 { name="ggrastr"; version="0.2.1"; sha256="0dip813s2ba706qwr2xxz4grj67a7g2cn9h6i1nv70yp7258jp30"; depends=[Cairo ggbeeswarm ggplot2 png ragg]; }; - ggrepel = derive2 { name="ggrepel"; version="0.9.0"; sha256="1nigyj05ag7z0gilrk5b60y2c5imyjg5674ngi4052f0gpda6z2g"; depends=[ggplot2 Rcpp rlang scales]; }; - ggridges = derive2 { name="ggridges"; version="0.5.2"; sha256="03pz257aw0mkh5k75rby9givkc1ky3n5scvhjhjiz9vry9fpffmh"; depends=[ggplot2 plyr scales withr]; }; + ggrastr = derive2 { name="ggrastr"; version="0.2.3"; sha256="0cwhgxxp23alsmccppx5bn5ri8wp5n5012d1m51rg7ss6q1194wc"; depends=[Cairo ggbeeswarm ggplot2 png ragg]; }; + ggrepel = derive2 { name="ggrepel"; version="0.9.1"; sha256="1z5xyr5f4aryy0v1gzz9m8m4s5fzzwbrf0fxll1nbflr8xnr3yr9"; depends=[ggplot2 Rcpp rlang scales]; }; + ggridges = derive2 { name="ggridges"; version="0.5.3"; sha256="0bmlqy1p6rac90af97ffpdi6php7dblx66l2hcm8ljidgyqzmspm"; depends=[ggplot2 plyr scales withr]; }; ggrisk = derive2 { name="ggrisk"; version="1.2"; sha256="1zcqpddv02hr77s8gw17gr7yww7h9yma0279rxnckxhxlfi88ym5"; depends=[cutoff do egg fastStat ggplot2 nomogramFormula rms set survival]; }; - ggroups = derive2 { name="ggroups"; version="2.0.3"; sha256="1qlx1jfmmpygswwbrqs7pxm426zggxgvd4q3jp9abfaq9aczs10p"; depends=[]; }; + ggroups = derive2 { name="ggroups"; version="2.1.0"; sha256="02x62dzpmisk224hs4kgmcc0r6pd87zvjnpdw1sm7rckhi5b56q2"; depends=[]; }; ggsci = derive2 { name="ggsci"; version="2.9"; sha256="0g73x6grbka7ahjh6z23m3wrcifp5rdfdiasbl8lq4sp6rplxwaa"; depends=[ggplot2 scales]; }; ggseas = derive2 { name="ggseas"; version="0.5.4"; sha256="1jpdijwll5l7bg7cmjnklkxffysi9ckzg50rw2a2cd00zwby11q9"; depends=[ggplot2 rlang seasonal zoo]; }; ggseqlogo = derive2 { name="ggseqlogo"; version="0.1"; sha256="13q6kcpxrqxqbji889fx63p0nsi08lk5yymkchig75r5k1d18ky1"; depends=[ggplot2]; }; - ggsignif = derive2 { name="ggsignif"; version="0.6.0"; sha256="17j9hg967k1wp9xw3x84mqss58jkb8pvlrnlchz4i1hklgykxqbg"; depends=[ggplot2]; }; + ggshadow = derive2 { name="ggshadow"; version="0.0.2"; sha256="08bnjl7zsa4kkjl4kadmwss84bngd36xqqly91lvv359qrzr9hzq"; depends=[ggplot2 glue rlang scales]; }; + ggside = derive2 { name="ggside"; version="0.0.1.3"; sha256="0bqcqw6kpfxpncqwkvk03nx1sml0zggm4lz0z3cfqhcryqn4rarl"; depends=[ggplot2 glue gtable rlang scales]; }; + ggsignif = derive2 { name="ggsignif"; version="0.6.1"; sha256="0rjy9wqsq67jjm1jz3j7hm599x0rshrrhw2w01iaqb9kf506hvjh"; depends=[ggplot2]; }; ggsn = derive2 { name="ggsn"; version="0.5.0"; sha256="04vnap83w06hbqqi5kgxmrdb3a13n5mcdk5lllymv6nrzvl84f2x"; depends=[ggmap ggplot2 maptools png sf]; }; ggsoccer = derive2 { name="ggsoccer"; version="0.1.6"; sha256="1b3cx2ym3pknshrxmdgwzyx92c1hl6kyvxm2s8izlaa21z8v6z59"; depends=[ggplot2]; }; ggsolvencyii = derive2 { name="ggsolvencyii"; version="0.1.2"; sha256="0jzj4iglgzwp6pfs5zr7mirdiqrrmbwdvl245b1fwf42rnxbqrq6"; depends=[dplyr ggplot2 magrittr tidyr]; }; ggsom = derive2 { name="ggsom"; version="0.4.0"; sha256="0qsih00rm3ng2zh6p2s7a35rh1qlvbkn82s53v765w60fjmhwkwf"; depends=[assertthat data_table dplyr entropy ggplot2 kohonen magrittr tibble tidyr]; }; - ggspatial = derive2 { name="ggspatial"; version="1.1.4"; sha256="0l77c6h845if5hfsjzvbdpysk04qbnpbb19g6zggrg3fxrqp1wh8"; depends=[abind ggplot2 glue rlang rosm scales sf tibble tidyr]; }; + ggspatial = derive2 { name="ggspatial"; version="1.1.5"; sha256="0mkgfpdgarnfvwx4g8x88b2afclknbrnidj9ib754dn4xbd7shfa"; depends=[abind ggplot2 glue rlang rosm scales sf tibble tidyr]; }; ggspectra = derive2 { name="ggspectra"; version="0.3.7"; sha256="0xd8g2m73qa5bd4wk1a81ayy48agqm4h9nadafs3qrcg8wszk8nm"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands scales tibble tidyr]; }; ggstance = derive2 { name="ggstance"; version="0.3.5"; sha256="0jz9vvnmcc6a38n8nzr458r65sna23bgn5r8mxdhzdlyqibihr7d"; depends=[ggplot2 plyr rlang withr]; }; - ggstar = derive2 { name="ggstar"; version="0.0.9"; sha256="1yixq9384h7m8xqkl8gcr0iai8f3a3yfa0yd34ahjzjs893x34vy"; depends=[ggplot2 gridExtra scales]; }; - ggstatsplot = derive2 { name="ggstatsplot"; version="0.6.6"; sha256="0kii730q1hljiqvi8zm5m4c0vwdjh30wwc0hv85b00jr4i83vk00"; depends=[cowplot dplyr ggcorrplot ggExtra ggplot2 ggrepel ggsignif insight ipmisc pairwiseComparisons paletteer parameters performance purrr rlang statsExpressions tidyr]; }; + ggstar = derive2 { name="ggstar"; version="1.0.2"; sha256="040bbdsfwal4dab2xpzgajxc0p5zsvd3jx56bxa7l59qdw24f0ha"; depends=[ggplot2 gridExtra scales]; }; + ggstatsplot = derive2 { name="ggstatsplot"; version="0.7.2"; sha256="1m9w6pj83jjwa90n8vzcznp9d0aczf16am33hz27ljs2jw154i89"; depends=[dplyr ggcorrplot ggplot2 ggrepel ggsignif insight ipmisc pairwiseComparisons paletteer parameters patchwork performance purrr rlang statsExpressions tidyr]; }; ggstudent = derive2 { name="ggstudent"; version="0.1.1-1"; sha256="0qs27b4lksaaaspavkycbzf8cfjxjli7xrfjby71sl0lca3fwm1g"; depends=[dplyr ggplot2]; }; ggswissmaps = derive2 { name="ggswissmaps"; version="0.1.1"; sha256="0is48x6k2p5dgj9q4km0dv33a9pcpfhlai9vz295y3acpyrkmnn4"; depends=[ggplot2]; }; ggtern = derive2 { name="ggtern"; version="3.3.0"; sha256="12lxmql9zspglp0baqp419l0vgilrf8lyxsza142bfyvmdbhh6d3"; depends=[compositions ggplot2 gridExtra gtable hexbin latex2exp lattice MASS plyr proto scales]; }; ggtext = derive2 { name="ggtext"; version="0.1.1"; sha256="0n19dlcys8v7myfyckr6dnq0kx79k3sbh8nwx1jsx8pgzfbi8a2b"; depends=[ggplot2 gridtext rlang scales]; }; - ggthemes = derive2 { name="ggthemes"; version="4.2.0"; sha256="0rrkzfggc1nlda1w1lbqdycx6nawxbkac1szhvkwrqlzh6agxcsv"; depends=[ggplot2 purrr scales stringr tibble]; }; + ggthemes = derive2 { name="ggthemes"; version="4.2.4"; sha256="0rw5f6axyz1pqn6qx9jwm38hjzn8bqs1nfjkvm96z3xnyn61cdbv"; depends=[ggplot2 purrr scales stringr tibble]; }; ggupset = derive2 { name="ggupset"; version="0.3.0"; sha256="079a1fghhbxhkx42ac0n5chmh07i60m2pkdk76frqbbmwrw7inx4"; depends=[ggplot2 gtable rlang scales tibble]; }; + ggvenn = derive2 { name="ggvenn"; version="0.1.8"; sha256="0zyf0faikghrz2lfhh170wxn0a0l8bwp15jn2q6nnpp1wvmh7gim"; depends=[dplyr ggplot2]; }; ggversa = derive2 { name="ggversa"; version="0.0.1"; sha256="0xqn8iznrm8q30pxwka88wi1z7lndi6lm12rq6ngcaxf294fbz01"; depends=[]; }; ggvis = derive2 { name="ggvis"; version="0.4.7"; sha256="1qv512pd4x5vmx15y9nvqmabbbw14h75fmi1sjbcg5yl25z0cswy"; depends=[assertthat dplyr htmltools jsonlite magrittr rlang shiny]; }; - ggvoronoi = derive2 { name="ggvoronoi"; version="0.8.3"; sha256="04dv33vnip0rrli1diq43v7vhr86bmxjdyxjbxz5x4371kbb312j"; depends=[deldir ggplot2 raster rgeos sp]; }; + ggvoronoi = derive2 { name="ggvoronoi"; version="0.8.4"; sha256="1qq5iw1m90s060cffwq8agp5cs4vgzg9i3wbnr6c0p0r081wz4rs"; depends=[deldir ggplot2 raster rgeos sp]; }; ggwordcloud = derive2 { name="ggwordcloud"; version="0.5.0"; sha256="0mr92738s3j9wm6mkr5hd2flqsqw3vfjifv3fajsygysbwrl8dn8"; depends=[colorspace ggplot2 png Rcpp scales]; }; - gh = derive2 { name="gh"; version="1.2.0"; sha256="1zvy3ylxvni10lhvmbm9h14mg4wlsbdbzbzviwf28jxss8749219"; depends=[cli gitcreds httr ini jsonlite]; }; + ggx = derive2 { name="ggx"; version="0.1.1"; sha256="13yvckny2b7b7rhgi28xm8379paskin78wm5095s1ily9a2dxgkg"; depends=[ggplot2 sets]; }; + gh = derive2 { name="gh"; version="1.3.0"; sha256="077drbxz3rx7idv6w24ipj1p6jnzv86a3iyryab699cc9q2kjh54"; depends=[cli gitcreds httr ini jsonlite]; }; + ghcm = derive2 { name="ghcm"; version="1.0.0"; sha256="1fvqqfa0rxkpp9x7mybkmqm24pbhyc4k4ncvzf6vnw86ay8b9n3k"; depends=[MASS refund]; }; + ghee = derive2 { name="ghee"; version="0.1.0"; sha256="0b3czx2ibi5p8xl7i36zxnab032vrkh5bv204r7wgg1xpx8pdlra"; depends=[gh jsonlite]; }; ghibli = derive2 { name="ghibli"; version="0.3.2"; sha256="0762dy3x7w0q1swag2lh33cpqdr9bbqw0963ymdpnchawdh5m50z"; depends=[prismatic]; }; ghql = derive2 { name="ghql"; version="0.1.0"; sha256="19awg98r2hwwwwrwh0166y8ij1clf58vrf02i8fhhfzddx3an6bz"; depends=[crul graphql jsonlite R6]; }; ghyp = derive2 { name="ghyp"; version="1.6.1"; sha256="02xiznl1v0fksqwyvjg8075qbiy29y1h1q8cr3lsbr95h8iyzqfh"; depends=[MASS numDeriv]; }; @@ -9121,18 +9487,19 @@ in with self; { gibble = derive2 { name="gibble"; version="0.4.0"; sha256="19il4si7ch5jr7plr8qwv7jrc5kfkxmh5jrcdvbn688gxcnv7bs0"; depends=[dplyr rlang tibble]; }; gibbs_met = derive2 { name="gibbs.met"; version="1.1-3"; sha256="1yb5n8rkphsnxqn8rv8i54pgycv9p7x1xhinx4l5wzrds3xhf2dc"; depends=[]; }; gif = derive2 { name="gif"; version="0.1.0"; sha256="119d7q9xs6xpncv1r2w008kld9z07ckyj1kja9b8n2lnlb8532pk"; depends=[MASS Matrix Rcpp RcppEigen]; }; - gifski = derive2 { name="gifski"; version="0.8.6"; sha256="00w4bzp0rrp4isy1rnxs6g1q07r3wndadk3mqdrxk2wxi7jmghna"; depends=[]; }; + gifski = derive2 { name="gifski"; version="1.4.3-1"; sha256="16nlg4d4cqbrh6jvi0nb7hnhmyj1wgzwjyjja135y1kh9jrd4al2"; depends=[]; }; gifti = derive2 { name="gifti"; version="0.8.0"; sha256="1gb3x4rln9vayjd9fgzb434mm3dwcqgrvlv6rmh4b39mjfm73sly"; depends=[base64enc R_utils xml2]; }; giftwrap = derive2 { name="giftwrap"; version="0.0.4"; sha256="1zsw529h69x9yaq2csfws4iqn3mm39z34kwzj0b2y850wzbn2dvp"; depends=[namespace processx readr tibble]; }; + gigg = derive2 { name="gigg"; version="0.2.1"; sha256="0qb8w455a8wxc5ljmydq4xag2kbj5yk06an0pd9hd4k48wssg8la"; depends=[BH Rcpp RcppArmadillo]; }; gim = derive2 { name="gim"; version="0.33.1"; sha256="1km8pyr1qfzffm33ihhlgvc0qxgxxfi161vkrz77d1b7jkpdyxjj"; depends=[numDeriv]; }; - gimme = derive2 { name="gimme"; version="0.7-4"; sha256="113g71g7pnjg3bcpviiyxqfmhwqihxi9kmrs28mg77p0rd9gjhg6"; depends=[data_tree igraph imputeTS lavaan MIIVsem nloptr qgraph]; }; + gimme = derive2 { name="gimme"; version="0.7-5"; sha256="0l8mdl9gp92wd1szx76xni0i1hikm2v7j0p8iwxsyglj4gbv9jli"; depends=[data_tree igraph imputeTS lavaan MIIVsem nloptr qgraph]; }; gimmeTools = derive2 { name="gimmeTools"; version="0.1"; sha256="1g170rz3c3qx27yy67f7xab4gkm0pbbvwlwkcsczfxphad609ryl"; depends=[easycsv magrittr miniUI rhandsontable rintrojs rstudioapi shiny shinyjs shinyWidgets]; }; - gimms = derive2 { name="gimms"; version="1.1.3"; sha256="0ij252zz75nfngh5idzznrdi4jn1ymbn24s6qilpf2qf8zilh89i"; depends=[curl Kendall ncdf4 raster zyp]; }; + gimms = derive2 { name="gimms"; version="1.2.0"; sha256="1g656lqrcfyaz3by2mdm0cffdlxvbjpprq1al0shc8p9c32yy7xj"; depends=[curl Kendall ncdf4 raster zyp]; }; giphyr = derive2 { name="giphyr"; version="0.2.0"; sha256="0273f7lama8bhaalafs66m6ksp32vx0j6rmh1qr4484i7wkmdfqn"; depends=[dplyr httr miniUI purrr rstudioapi shiny tibble]; }; - giscoR = derive2 { name="giscoR"; version="0.2.2"; sha256="1nqqq6zpi6f1bn3vx1666fsz7jgf0ijn8d28j97ld8qsvaaaw6k9"; depends=[countrycode geojsonsf sf]; }; + giscoR = derive2 { name="giscoR"; version="0.2.4"; sha256="02sv4dg4chc0wg4ryf8ng23v6b7nv72f81n453a5msg5rz914lmb"; depends=[countrycode geojsonsf lwgeom sf]; }; gistr = derive2 { name="gistr"; version="0.9.0"; sha256="0ac9ikrdg6i8xvlma0gizvsdva46408lk7hvsgkqirhy2ljy02hp"; depends=[assertthat crul dplyr httr jsonlite knitr magrittr rmarkdown]; }; - git2r = derive2 { name="git2r"; version="0.27.1"; sha256="1h1vfzym6hi1fqs9p5z5v0f4xldggr425frw8k6dsidah3qhg4h9"; depends=[]; }; - git2rdata = derive2 { name="git2rdata"; version="0.2.1"; sha256="11mdalfgarqscb6yg0p9g4mwzwnbkq40migpv5sk0i3vdz0xpapp"; depends=[assertthat git2r yaml]; }; + git2r = derive2 { name="git2r"; version="0.28.0"; sha256="1wjmbs9cmm16pm3g0rmqp7cxxyh95m5lgx4fx5bpgj6j466i8vff"; depends=[]; }; + git2rdata = derive2 { name="git2rdata"; version="0.3.1"; sha256="0nvx6lfp66l44n3xwkj5biirrzwvl52dssfx8jysqjl1kgfrwwh3"; depends=[assertthat git2r yaml]; }; gitcreds = derive2 { name="gitcreds"; version="0.1.1"; sha256="1snzn7nxy0rwz0bzjsg6k04c0n811dgn8gn9cmn2v78aj57ayjmi"; depends=[]; }; gitear = derive2 { name="gitear"; version="1.0.0"; sha256="139h19yyi7bpkps2vskdnga43ggpgb9fg8jdr7n8vgadxjamv98p"; depends=[dplyr httr jsonlite magrittr mockery Rcpp stringr tibble tidyr]; }; gitgadget = derive2 { name="gitgadget"; version="0.6.0"; sha256="1rqjzlfnwqqvad8q73akdir0rd48219mvh30yg9k7lp7rnm2wpmz"; depends=[callr curl dplyr jsonlite markdown miniUI rstudioapi shiny shinyFiles usethis]; }; @@ -9141,61 +9508,60 @@ in with self; { gitlabr = derive2 { name="gitlabr"; version="1.1.6"; sha256="1p68w0q8mjpz2hr6ys1qbfw1y4b35hgs27kzfkzv9hfi1vxqfd1h"; depends=[arpr base64enc dplyr httr magrittr purrr stringr tibble yaml]; }; gitlink = derive2 { name="gitlink"; version="0.1.3"; sha256="1g34cyx35wlpq42alsayk69x708zxqgvbdndb7j6n1q0rm4vncvd"; depends=[htmltools rlang]; }; givitiR = derive2 { name="givitiR"; version="1.3"; sha256="0y2slhxhj7k413kjaydin9hq3x2xgx4cgjshdplwnmg3x2nakn31"; depends=[alabama rootSolve]; }; - gjam = derive2 { name="gjam"; version="2.3.2"; sha256="0zlx4q4w09c4gcjjw3niy61nrfdrqb4h9f3x2sg33lqnhwkdddwk"; depends=[MASS RANN Rcpp RcppArmadillo]; }; + gjam = derive2 { name="gjam"; version="2.3.6"; sha256="0snazxi1nw0hr2la15lv4a9blkvrl8g6ji0i0bibbhyyqaj48lhn"; depends=[MASS RANN Rcpp RcppArmadillo]; }; gk = derive2 { name="gk"; version="0.5.1"; sha256="1hgxb1lp78pbnj22i7ryf46im301j05y7hh75z2fxvv5nqgg2v75"; depends=[Ecdat lubridate progress]; }; - gkgraphR = derive2 { name="gkgraphR"; version="1.0.1"; sha256="05bwcsg5w4231h4y0p4grkswgjnd3ygcnfsj72y2cxcjsnladylx"; depends=[httr ISOcodes jsonlite]; }; + gkgraphR = derive2 { name="gkgraphR"; version="1.0.2"; sha256="1sb52hhpwm3bq7rn2xdq5vly6z1c5yab9a26xzgj3c5s47vk02pa"; depends=[httr ISOcodes jsonlite]; }; gkmSVM = derive2 { name="gkmSVM"; version="0.81.0"; sha256="119g5rhc7ffyviz04r04aj5z1g6abnj3ddd01g7db505sdr6lapj"; depends=[kernlab Rcpp ROCR seqinr]; }; glacierSMBM = derive2 { name="glacierSMBM"; version="0.1"; sha256="0117fzz2b1lccs0kkwz59w2yysi72j54yvz7373pz11w7rjds84f"; depends=[raster sp udunits2]; }; - glamlasso = derive2 { name="glamlasso"; version="3.0"; sha256="1ynhl868kh25l8m04ln6ix31z9r26lrbr5ajprpq9yfhqs4l9ddc"; depends=[Rcpp RcppArmadillo]; }; glancedata = derive2 { name="glancedata"; version="1.0.1"; sha256="01j7syjn33pc7hq032nmyak38wn35yv3n7is9g2ggs14kj3xqb0c"; depends=[dplyr forcats GGally ggplot2 gridExtra openxlsx purrr tibble tidyr]; }; glarma = derive2 { name="glarma"; version="1.6-0"; sha256="0n0mv4xvh5q3y383cs224x6r608ciw4822pkanvmcjsc9zl0z1ar"; depends=[MASS]; }; glassdoor = derive2 { name="glassdoor"; version="0.8.1"; sha256="0r85k1fyk8979ahfmd4vmzkhyvrlnpkgjwg1yi7092kpx8877lj0"; depends=[httr]; }; glasso = derive2 { name="glasso"; version="1.11"; sha256="02p3612rpydk195n2qr77lp1j2w8zsw1ckkk98c8angm4r5q8dsc"; depends=[]; }; glassoFast = derive2 { name="glassoFast"; version="1.0"; sha256="1sgmh4l06q7mrmgnimphpqgix4k4jzaj2l30kpmnf92caa2v7ngw"; depends=[]; }; glba = derive2 { name="glba"; version="0.2"; sha256="0ckcz6v6mfbv34s8sp086czhb5l58sky79k84332rrz6wj47p3md"; depends=[]; }; - glca = derive2 { name="glca"; version="1.1.0"; sha256="0digyha69l02h9bgapvnfxxa8q97z3amq8qc93nm3a3acw5cq4ig"; depends=[MASS Rcpp]; }; + glca = derive2 { name="glca"; version="1.2.2"; sha256="1365slpm9fmap6bj794x08iahif84kw584arhcgpfq1khsl50b1y"; depends=[MASS Rcpp]; }; glcm = derive2 { name="glcm"; version="1.6.5"; sha256="13my6y9jqd86cg5n74p4b8mqbdgwnanxx4qf1rrhm5jxf6sa31qm"; depends=[raster Rcpp RcppArmadillo]; }; gld = derive2 { name="gld"; version="2.6.2"; sha256="1wrw7i5bq7rb2ahadm57y9fmr697r7lp9ln7ajcd592b0nn60n4i"; depends=[e1071 lmom]; }; gldrm = derive2 { name="gldrm"; version="1.5"; sha256="1mbdxqjw6sa47kigwrjq1gn6vi36zhg9j2lck144iwa10ms0y9xp"; depends=[]; }; glinternet = derive2 { name="glinternet"; version="1.0.11"; sha256="1lqph2hj0h826gcfyk290ahkfalpnrd6jzymm60xi2qxia14lzk5"; depends=[]; }; gllm = derive2 { name="gllm"; version="0.37"; sha256="169y3yz947d8qdphqv2a6yrdash6v2h9jfvj2fk7rcpmz0r45kl6"; depends=[]; }; - gllvm = derive2 { name="gllvm"; version="1.2.3"; sha256="0jqfijmkz2rzwfzg03q4cdd9cr4nz0m7yaka0d0nh62jakkgfjqm"; depends=[fishMod MASS Matrix mgcv mvabund mvtnorm RcppEigen statmod TMB]; }; + gllvm = derive2 { name="gllvm"; version="1.3.0"; sha256="0cj45wzcxjsvm4b1c0q2swn9y8lys4gnaxzzsviqpmqkv83mfqfy"; depends=[fishMod MASS Matrix mgcv mvabund mvtnorm RcppEigen statmod TMB]; }; glm_deploy = derive2 { name="glm.deploy"; version="1.0.4"; sha256="1akklvbhz2pp0sv1hax1jq0s9ajbfv1597z643gh5l9hwizj2h9m"; depends=[Rcpp]; }; glm_predict = derive2 { name="glm.predict"; version="4.0-0"; sha256="12k8rrjvcb5nss5bh1wrh1pfcpcsj635xgksz7lsi3xbryk007ci"; depends=[AER MASS nnet survival]; }; glm2 = derive2 { name="glm2"; version="1.2.1"; sha256="1byqlvpls23gzy7xlbs1kgfr4bsrmsrpc8rzzacf9czap1nlw39y"; depends=[]; }; - glmBfp = derive2 { name="glmBfp"; version="0.0-60"; sha256="1yv6db80k8lbchd35lqpf7jjn2ss9x6rrw4r04j3xz9y246lfvxz"; depends=[coda Rcpp RcppArmadillo rms Runuran statmod survival]; }; - glmaag = derive2 { name="glmaag"; version="0.0.6"; sha256="1yk5bx1gyj97b5qjy30q1gsjlp9amklwf070i0129f8dj7vjyaf0"; depends=[data_table foreach ggplot2 gridExtra huge Matrix maxstat OptimalCutpoints plotROC pROC Rcpp RcppArmadillo shiny survival survminer]; }; glmbb = derive2 { name="glmbb"; version="0.5-1"; sha256="1jy77z5fr781rm5mx6kszwi2zlvnpfwi24fn9vw1kza4jzcw9pjw"; depends=[digest]; }; glmc = derive2 { name="glmc"; version="0.3-1"; sha256="0x6jk2l5rpjkp5x815gpiwv8maa7mhmy6m8gaxbv1cbn3zyccynn"; depends=[emplik]; }; glmdisc = derive2 { name="glmdisc"; version="0.6"; sha256="031rz3s5d7hz9fzmsj7aqhzwrn05rnfvk9292k2r0qpr6k02mk3b"; depends=[caret dplyr gam magrittr MASS nnet Rcpp RcppEigen RcppNumerical]; }; glmdm = derive2 { name="glmdm"; version="2.60"; sha256="09vljki24fccqkvxkmg2i6a8pxqhfwm155b41m2q51lqaq29bfw7"; depends=[]; }; + glme = derive2 { name="glme"; version="0.1.0"; sha256="1ysg1yx0pdyxlbkn36023230yky8wj3rvi3skrdqdjbnnyzhn49b"; depends=[dplyr nlme reshape]; }; glmertree = derive2 { name="glmertree"; version="0.2-0"; sha256="0lfn6dap38i6cnfy4gdap13aq81h9cm3bip7ci57q9br9b00x7ib"; depends=[Formula lme4 partykit]; }; glmglrt = derive2 { name="glmglrt"; version="0.2.2"; sha256="1954ywshnqzr7h77wshf63y3zx3ra8mrfabg5dqjhkgv4rsk3h1y"; depends=[MASS parameters]; }; - glmgraph = derive2 { name="glmgraph"; version="1.0.3"; sha256="16sq6i7kbw20nvwikpa02z3pb7wqw3270j6ss7f8sgf548skhmx0"; depends=[Rcpp RcppArmadillo]; }; glmlep = derive2 { name="glmlep"; version="0.2"; sha256="0rq2vxbr732r725pn8qdvppxcrhjhyvlr550svfgy1inq985c1w4"; depends=[]; }; glmm = derive2 { name="glmm"; version="1.4.2"; sha256="03jgj3ssza2j2cg6nl4pbbmj57s951mxbas32cg5789zh9hjbygg"; depends=[doParallel foreach itertools Matrix mvtnorm trust]; }; glmmEP = derive2 { name="glmmEP"; version="1.0-3.1"; sha256="0fql85m0mxn58jh3mgrcw56bb4dx7amrz39ngqrljwi5pv5i7aj4"; depends=[lme4 matrixcalc]; }; glmmLasso = derive2 { name="glmmLasso"; version="1.5.1"; sha256="1az9vdnyqyrfn1q7zrn6x4ywx77b0vg65cni45x37b0ybkwpis39"; depends=[Matrix minqa]; }; glmmML = derive2 { name="glmmML"; version="1.1.1"; sha256="1m2dcw522nd78x7z7la7a4cii3030s0bl4sqxbvkxn1k15jf4pr5"; depends=[]; }; + glmmSeq = derive2 { name="glmmSeq"; version="0.1.0"; sha256="0mdcwh6vvh4pc64r4jl78dr6x8fwclbbx8s9kf2sj39mm7iqpkqz"; depends=[car gghalves ggplot2 ggpubr lme4 MASS pbapply pbmcapply plotly qvalue]; }; glmmTMB = derive2 { name="glmmTMB"; version="1.0.2.1"; sha256="1a35hxcxz1cdm3zd5s7fyjaw2qs00hkacgr7h9130amygc1262ab"; depends=[lme4 Matrix nlme RcppEigen TMB]; }; glmmboot = derive2 { name="glmmboot"; version="0.5.1"; sha256="1q4lp5s00vmymvln4qcsnfgcn918dsvkdhq16h0f94yiqczadsb9"; depends=[]; }; glmmfields = derive2 { name="glmmfields"; version="0.1.4"; sha256="0gnb2s34xz7cjyaa2w2wq7n6c5016a14mc03kalvwdv3f7b98zan"; depends=[assertthat BH broom broom_mixed cluster dplyr forcats ggplot2 loo mvtnorm nlme Rcpp RcppEigen reshape2 rstan rstantools StanHeaders tibble]; }; glmmsr = derive2 { name="glmmsr"; version="0.2.3"; sha256="1fbg5zji0xjr9q1yc6phsp37nsrj7nfs8yiri0j9s84wzgwjili1"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; }; - glmnet = derive2 { name="glmnet"; version="4.0-2"; sha256="0qdswxvdwjcnw0by15p9yfzw8laq4f2j0ivpma6q8c5zywldpxxc"; depends=[foreach Matrix shape survival]; }; - glmnetUtils = derive2 { name="glmnetUtils"; version="1.1.6"; sha256="1an9vg8kih1fq73av2yw21zamsnly9h47bcajbpblhpljrixh1ic"; depends=[glmnet Matrix]; }; + glmnet = derive2 { name="glmnet"; version="4.1-1"; sha256="0zpfq0m1y5zks5p9r28553ykywwrhrb3ds8m6b7sm6hj4n1c4csd"; depends=[foreach Matrix shape survival]; }; + glmnetUtils = derive2 { name="glmnetUtils"; version="1.1.8"; sha256="1k8ivzjgpkm2a948qxx3wmkhlppbk31qc76spv2pscmp24x0lxyn"; depends=[glmnet Matrix]; }; glmnetcr = derive2 { name="glmnetcr"; version="1.0.6"; sha256="0cs0yj2js0920iggcw2vci5y9hnsm3hd7wpd7mwnx8mszwrklawg"; depends=[glmnet]; }; glmpath = derive2 { name="glmpath"; version="0.98"; sha256="1jbiqqd1s93i941dhyyx50zlgwavhyjfw8bx13z4gz05rdvi4gn8"; depends=[survival]; }; glmpathcr = derive2 { name="glmpathcr"; version="1.0.8"; sha256="00hbgp1kdbvihqvx03vv6gq32whrkcfq3n32bbj3cda85dnivlwq"; depends=[glmpath]; }; glmpca = derive2 { name="glmpca"; version="0.2.0"; sha256="02xjf0gg52925hw9nw2j0znfmzfzfwbv0fxjl9d2fy9j63drr2h4"; depends=[MASS]; }; glmtlp = derive2 { name="glmtlp"; version="1.1"; sha256="01kyw0xipyr9z7x9z41wz7rqargzqd8s8ri34ffdvd3ggrdznl0p"; depends=[glmnet]; }; + glmtoolbox = derive2 { name="glmtoolbox"; version="0.1.0"; sha256="14cq9x21ms5is1ks5agzjj7hw0yly0v3s5pazswjmygr2xkh66nk"; depends=[numDeriv Rfast]; }; + glmtrans = derive2 { name="glmtrans"; version="1.0.0"; sha256="1r8zgdybl2z9bivcfdmbx2wfpaj82d95gdkaixwzwjknjn50ccyv"; depends=[assertthat caret doParallel foreach formatR ggplot2 glmnet]; }; glmtree = derive2 { name="glmtree"; version="0.2"; sha256="07b7ma38r5cjv6c33q1n2f8xvzn3lj004i8v947pqdhg3fi9wlc6"; depends=[caret dplyr magrittr partykit]; }; glmulti = derive2 { name="glmulti"; version="1.0.8"; sha256="0zviahj99645s1xs2f9z7rnv95x4rdz7mfwzy3qjfw46yqpfj5cn"; depends=[leaps rJava]; }; glmvsd = derive2 { name="glmvsd"; version="1.4"; sha256="03axsn85axs4d6fdlr3wcdwq6qa4991svkqc7k9r52kk1ar0w5zz"; depends=[brglm glmnet MASS ncvreg]; }; glmx = derive2 { name="glmx"; version="0.1-1"; sha256="06v2qxgr16w0qnfhjr9vdqcad5v475pwg2yhw0i236yzqbnsssh6"; depends=[Formula lmtest MASS sandwich]; }; globalGSA = derive2 { name="globalGSA"; version="1.0"; sha256="1f3xv03m6g2p725ff0xjhvn2xcfm7r7flyrba080i4ldy6fd8jg8"; depends=[]; }; - globalKinhom = derive2 { name="globalKinhom"; version="0.1.2"; sha256="1hvl2lhaxpzgdii5jcays2yvpxvrid5njninfn8px4ymf7h597zw"; depends=[spatstat]; }; + globalKinhom = derive2 { name="globalKinhom"; version="0.1.3"; sha256="1hj2f8sd9mfr44g93y2j6sazrlkpkgb10jw5fcjcf3w5738pvh5a"; depends=[spatstat spatstat_core spatstat_geom]; }; globalOptTests = derive2 { name="globalOptTests"; version="1.1"; sha256="0yf4p82dpjh36ddpfrby7m3fnj2blf5s76lncflch917sq251h4f"; depends=[]; }; - globalboosttest = derive2 { name="globalboosttest"; version="1.1-0"; sha256="1k7kgnday27sn6s1agzlj94asww81655d2zprx6qg7liv677bxvf"; depends=[mboost survival]; }; globals = derive2 { name="globals"; version="0.14.0"; sha256="1wrjiiif6rpc268zz79pvpw33si6n6ffgxdnxmmcracwhb5vqg90"; depends=[codetools]; }; globe = derive2 { name="globe"; version="1.2-0"; sha256="0xa0q5dac0g7xdlr679f3km8nqxlm7gi4msp9fbfivfvy0rmri96"; depends=[]; }; glogis = derive2 { name="glogis"; version="1.0-1"; sha256="1sbvcg5slvd2c7fasvbj534x36rh11zq3mxv5z0jwpqd6h1xadmd"; depends=[sandwich zoo]; }; @@ -9203,33 +9569,35 @@ in with self; { glpkAPI = derive2 { name="glpkAPI"; version="1.3.2"; sha256="1qwq6vbx1symly6k72xgj5qzqw7j6wdsgiflm649pdxnisfgzh00"; depends=[]; }; glrt = derive2 { name="glrt"; version="2.0"; sha256="0p2b0digndvnn396ynv56cdg436n3ll7pxkb81rs3dhwbyqyc948"; depends=[survival]; }; glue = derive2 { name="glue"; version="1.4.2"; sha256="1bgpirdvjrf0da734clrixawvpdap4lpda4g89vais96589m8wwz"; depends=[]; }; - gluedown = derive2 { name="gluedown"; version="1.0.2"; sha256="1vq5zgwlwj5rzdwj7z9ypnvj2fw9m653bdbivb2hx2z2hl8qwfp9"; depends=[glue]; }; + gluedown = derive2 { name="gluedown"; version="1.0.3"; sha256="0wzci7v1rrxa1zkkk5462akqcs183y7ls69wx0adwvqj4k1581d5"; depends=[glue magrittr]; }; gluvarpro = derive2 { name="gluvarpro"; version="4.0"; sha256="09l9yincr1k5j9wnj3zvfzsffjh3r54aa8fn0ik8vhlbq13ag8kp"; depends=[ggplot2 gridExtra pracma scales tidyr zoo]; }; glvmfit = derive2 { name="glvmfit"; version="0.0.0"; sha256="1mdxscvpc0cfmzpmswpml28b7kl254awl86mgv0nkgrs8rgrb05k"; depends=[]; }; + glycanr = derive2 { name="glycanr"; version="0.4.0"; sha256="1ic2v2dim0a8kzl38vx8an80jrbzimng0plrx62a1ps1jnczihl9"; depends=[coin dplyr ggplot2 tidyr]; }; + gm = derive2 { name="gm"; version="1.0.2"; sha256="1g0frcfk2ybhhz0sixdmj8h3z61acaxs10ybja60q91mxlyix2zx"; depends=[base64enc glue htmltools knitr magick magrittr MASS rlang rstudioapi stringr]; }; gmDatabase = derive2 { name="gmDatabase"; version="0.5.0"; sha256="0prap4a8pvylmvakd2ii87jz9bqf0vvfsxdi4iwa40nx444hqhx2"; depends=[DBI digest foreach RMySQL shiny]; }; gmGeostats = derive2 { name="gmGeostats"; version="0.10-7"; sha256="19rpv7dac7gqal7fxk79xa74ifrqqf1wxpzky11ham3pck242rhw"; depends=[boot compositions foreach gstat RColorBrewer sp]; }; gma = derive2 { name="gma"; version="1.0"; sha256="08hxbs9z4vq5zjis0lgdcvlysaj1k7i0icdk3wsyqf3wd9znsibi"; depends=[car MASS nlme]; }; gmailr = derive2 { name="gmailr"; version="1.0.0"; sha256="0wgh428qrwn6rxkcv9xmpya4ygrmc5pblxp0fw0ddgwbl99dhhi5"; depends=[base64enc crayon gargle httr jsonlite lifecycle magrittr mime rematch2]; }; gmapsdistance = derive2 { name="gmapsdistance"; version="3.4"; sha256="1hazf6xb4ja6h2lrl63kbd78wzny9sljiid9rq1r3szn3l1mc7dn"; depends=[RCurl XML]; }; gmat = derive2 { name="gmat"; version="0.2.2"; sha256="0iq2b3s60fyam45ykk67xyi2yhr8ma1s2vw4059357j1948525p2"; depends=[gRbase igraph]; }; + gmeta = derive2 { name="gmeta"; version="2.3-1"; sha256="02w3a8c189wdvcxsnclbgzb6bc9fq88rcw2danxa6i9g7q4kq2sp"; depends=[BiasedUrn binom]; }; gmfd = derive2 { name="gmfd"; version="1.0.1"; sha256="03sag09x7pjyzsp6w1z06108ig068krmw75064cnl3pqfvfyjfgr"; depends=[]; }; - gmgm = derive2 { name="gmgm"; version="1.0.1"; sha256="0pkv4q4w2bxkf9pqqllzjbbyqvax3w97rlmgaf5d6pwjq4lvk9hf"; depends=[dplyr ggplot2 purrr rlang stringr tidyr visNetwork]; }; - gmm = derive2 { name="gmm"; version="1.6-5"; sha256="12lzgrrir2hlnqlq42s2ddj8yvra78br3icmz03ngyk14a4r0w5i"; depends=[sandwich]; }; + gmgm = derive2 { name="gmgm"; version="1.0.2"; sha256="189pbhpncmf2p2n6wk25jcjk3xcq28mybdwyj9dskixjmidwwaw8"; depends=[dplyr ggplot2 purrr rlang stringr tidyr visNetwork]; }; + gmm = derive2 { name="gmm"; version="1.6-6"; sha256="16vkb472bjlfccfpl94mz772nbyf76wkwb2shai18jja3fnj3cxi"; depends=[sandwich]; }; gmnl = derive2 { name="gmnl"; version="1.1-3.2"; sha256="01pviab3gyvjdlv5jy7wzp33909znhpn47kar55bwkm6gm3bdlg8"; depends=[Formula maxLik mlogit msm plotrix truncnorm]; }; gmodels = derive2 { name="gmodels"; version="2.18.1"; sha256="0s8kd8krqk4kwv2zqxpsfy3w8qdwf5naf4b5l383vidq9sil0qb2"; depends=[gdata MASS]; }; - gmp = derive2 { name="gmp"; version="0.6-1"; sha256="11rl7qmfrpp1974f0vzsi3zjyx147wlb82ydxak2b60khfvhrn90"; depends=[]; }; + gmp = derive2 { name="gmp"; version="0.6-2"; sha256="03kzbflgpy5sgnzxmhshs5qv7jjmfc113ybkhxys4z8y7xdv9z3b"; depends=[]; }; gms = derive2 { name="gms"; version="0.4.0"; sha256="1m7bhy4vsz6l09pal9ibjlskmbyjmc29hqwjim1x8yansd5bxpzv"; depends=[dplyr rlang stringr yaml]; }; gmt = derive2 { name="gmt"; version="2.0.2"; sha256="0z5abh0kw97y90nxkkxxg2xgv1avxijf71v88lwhy25jgv8r7b38"; depends=[]; }; - gmvarkit = derive2 { name="gmvarkit"; version="1.3.1"; sha256="0zz68prwi3whfclz6av9d8spb7c17zcadx0wpwp1vll4zxxlx08c"; depends=[Brobdingnag mvnfast pbapply]; }; + gmvarkit = derive2 { name="gmvarkit"; version="1.4.1"; sha256="03wn0nwfzv2sdcdhap5bwkiw4jixawpzf9pkm5cpxjkrqhdhdpy3"; depends=[Brobdingnag mvnfast pbapply]; }; gnFit = derive2 { name="gnFit"; version="0.2.0"; sha256="0cji4zjslh18dfj0l827r6br4hx2f0akiaxrg7fhhyyyhgdcjnsm"; depends=[ismev rmutil]; }; gnlm = derive2 { name="gnlm"; version="1.1.1"; sha256="1krbz791l5qc06sh6my0bkq420b5afncw87lhyx1yiml2yg46zrk"; depends=[rmutil]; }; gnm = derive2 { name="gnm"; version="1.1-1"; sha256="1lddsdsg43wpg681s906i4xqqfbjdd1qb9ml5dfprb02i1806aa2"; depends=[MASS Matrix nnet qvcalc relimp]; }; gnn = derive2 { name="gnn"; version="0.0-2"; sha256="0sh9b6d0zvrml7d1bnirxld2lwrgrd7ma3ky7xl71kis0x3fjdq9"; depends=[keras qrng tensorflow]; }; - gnomonicM = derive2 { name="gnomonicM"; version="1.0.0"; sha256="1g4849rbqbc9ybip2qwmjajxsd4ayd3jv9hgfv60dygqdnscl166"; depends=[minqa triangle]; }; + gnomonicM = derive2 { name="gnomonicM"; version="1.0.1"; sha256="1yv5ry21rv69hfd4wmhnwhvarnp49hn200aws428ahs5wvx3md1v"; depends=[kableExtra minqa triangle]; }; gnorm = derive2 { name="gnorm"; version="1.0.0"; sha256="17h43qwb07wk5hiif89k6dgn6bbdsqfy2jy3k5blbdhhp3b9jcqp"; depends=[]; }; gnumeric = derive2 { name="gnumeric"; version="0.7-8"; sha256="0iwl00mzsg8h8q67bjp6485idjlmj24362b1rbmkifckss8hrc98"; depends=[XML]; }; - goeveg = derive2 { name="goeveg"; version="0.4.2"; sha256="0k9pyph065x8wp452x8kz28ikhsbrm80ln4yssmcgqm7085dyyya"; depends=[cluster fields Hmisc mgcv vegan]; }; - gofCopula = derive2 { name="gofCopula"; version="0.3-3"; sha256="1hqna4m9b2kcksfc7r0rmi1wqw6p4a1miinm2548gpbiz5ai7ni2"; depends=[copula crayon doSNOW foreach MASS numDeriv progress R_utils SparseGrid VineCopula yarrr]; }; + gofCopula = derive2 { name="gofCopula"; version="0.4-1"; sha256="17bdrn8xsqjz64caa5wdigkv798i18gc2f9jiin1bz840bqn1abg"; depends=[copula crayon doSNOW foreach MASS numDeriv progress R_utils SparseGrid VineCopula yarrr]; }; gofastr = derive2 { name="gofastr"; version="0.3.0"; sha256="02jn4xbbafl7siwvkqns1818wmw813x9cvqfcnpnmcippiqhrb0b"; depends=[data_table quanteda slam SnowballC tm]; }; goffda = derive2 { name="goffda"; version="0.0.7"; sha256="183hz0x0d9qh8v2k2qa5ii1g8hpmgl9bpd3dvb9f5v58zmxhgl8h"; depends=[fda_usc glmnet ks Rcpp RcppArmadillo]; }; gofgamma = derive2 { name="gofgamma"; version="1.0"; sha256="00wda3fandrd1kkm20fb615g5fd0wykk3s0xn0xh9da28q08yh2m"; depends=[]; }; @@ -9237,14 +9605,14 @@ in with self; { goftest = derive2 { name="goftest"; version="1.2-2"; sha256="0ivnkqhv5xgiv05dm648nngacymd8x8g0fyppv3bc0mhcqk9k5z4"; depends=[]; }; gogarch = derive2 { name="gogarch"; version="0.7-2"; sha256="03gpl73zc6kx4gni59xbg7b38dkpd7p4c7kvlqm46f58j257viik"; depends=[fastICA fGarch]; }; goldi = derive2 { name="goldi"; version="1.0.1"; sha256="191ac02bwrxr3khq6qirhxzfhv7pqfhqyg7jb473p5vwygpvc53l"; depends=[dplyr futile_logger magrittr Rcpp RcppArmadillo SnowballC tm]; }; - golem = derive2 { name="golem"; version="0.2.1"; sha256="07g5sagdq1n5i24bc8pnx9y303adraqppq1j9lyd4n5q0phbgh2y"; depends=[attempt cli config crayon desc dockerfiler fs here htmltools jsonlite pkgload remotes rlang roxygen2 rstudioapi shiny testthat usethis yaml]; }; + golem = derive2 { name="golem"; version="0.3.1"; sha256="1amasx97ywyp0x7khdwmliaql4cnpc6gsn10rbd128wqcbma504k"; depends=[attempt cli config crayon desc dockerfiler fs here htmltools jsonlite pkgload remotes rlang roxygen2 rstudioapi shiny testthat usethis yaml]; }; gomms = derive2 { name="gomms"; version="1.0"; sha256="1i9d5y28wrhal990x7xxy99v3z9y2pzlakj7wnynd3dpx5pqr0jj"; depends=[]; }; gontr = derive2 { name="gontr"; version="1.1.0"; sha256="0asvpc3nizcn7cqdxr1j9hvhprmrazd8c7a2svhmln4vg9x1zzkp"; depends=[]; }; goodpractice = derive2 { name="goodpractice"; version="1.0.2"; sha256="08rnm8z0pry5mwpc7p37r6f2rd56dry9djpcvvs9yl170w56psx0"; depends=[clisymbols covr crayon cyclocomp desc jsonlite lintr praise rcmdcheck rstudioapi whoami withr xml2 xmlparsedata]; }; - googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="0.8.0"; sha256="0zpnix2ql7p9l57iyv43yz1z4y5v7d5zi7yvs0z4i4yi5zgwqh60"; depends=[assertthat cli dplyr googleAuthR httr jsonlite magrittr memoise purrr rlang tibble tidyr]; }; - googleAuthR = derive2 { name="googleAuthR"; version="1.3.1"; sha256="0mm591z5zqsy6cdzr8s24msghpr1sia7n75h21axnh59m2m7md95"; depends=[assertthat cli digest gargle httr jsonlite memoise rlang]; }; - googleCloudRunner = derive2 { name="googleCloudRunner"; version="0.3.0"; sha256="1q2q449dkkwck1asi4a0gqxa1l3by6dqk73aj1lsn7299b9p7c9z"; depends=[assertthat cli googleAuthR googleCloudStorageR httr jsonlite openssl progress usethis yaml]; }; - googleCloudStorageR = derive2 { name="googleCloudStorageR"; version="0.5.1"; sha256="0sd6ca1ksv22avr5rcvkf5089f9igb8gqa83kidlc4xklaj6g92m"; depends=[assertthat curl googleAuthR httr jsonlite openssl yaml zip]; }; + googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="1.0.0"; sha256="0j6ppnxk7qk2x5z89n789blakzcz0q4h61dchh4fg3kbfbv6xly6"; depends=[assertthat cli dplyr googleAuthR httr jsonlite magrittr measurementProtocol memoise purrr rlang tibble tidyr usethis whisker]; }; + googleAuthR = derive2 { name="googleAuthR"; version="1.4.0"; sha256="004qbpvsq8ia1i0qdca76ndv14c4p3ajlp7bgfni6709jkg8ka6x"; depends=[assertthat cli digest gargle httr jsonlite memoise rlang]; }; + googleCloudRunner = derive2 { name="googleCloudRunner"; version="0.4.1"; sha256="0mvwgx2i4n0qymib1a7v3n7fa88hpwqh6fffclasxsr1ncdxankq"; depends=[assertthat cli curl googleAuthR googleCloudStorageR httr jose jsonlite openssl plumber progress usethis yaml]; }; + googleCloudStorageR = derive2 { name="googleCloudStorageR"; version="0.6.0"; sha256="1aah6lkr8qb07kqmmzdd4jdhsxcsibbh8knjb7jm9rs7z73lsjd8"; depends=[assertthat curl googleAuthR httr jsonlite openssl yaml zip]; }; googleCloudVisionR = derive2 { name="googleCloudVisionR"; version="0.2.0"; sha256="1n4gkmnwp9wadxz1izggxnpcpm4bz3imhq5y3i2szr8zwafcqqjv"; depends=[data_table glue googleAuthR jsonlite purrr]; }; googleComputeEngineR = derive2 { name="googleComputeEngineR"; version="0.3.0"; sha256="1s0qvnijzkja645lim373swk815n3s1292q6sk3q36ss70q42cfg"; depends=[assertthat future googleAuthR httr jsonlite]; }; googleLanguageR = derive2 { name="googleLanguageR"; version="0.3.0"; sha256="0lm50g3gshp18nvygi6is2rayzhcx0rw2rvb4lvm0jlx5m96xgxb"; depends=[assertthat base64enc googleAuthR jsonlite magrittr purrr tibble]; }; @@ -9252,30 +9620,32 @@ in with self; { googlePrintr = derive2 { name="googlePrintr"; version="0.0.1"; sha256="19rm78x8qd61ilc6h1kn3dw63m6dfsckqkd3n76krvi0akgl72w5"; depends=[googleAuthR httr jsonlite]; }; googlePublicData = derive2 { name="googlePublicData"; version="0.16.1"; sha256="15hyslpqvncg21q581h061rfyg99y8lavqw1x8hzl7xzd49bn9r5"; depends=[readxl XML]; }; googleTagManageR = derive2 { name="googleTagManageR"; version="0.1.6"; sha256="1y2avhgvzrpmpyx341di8ml2pdj10y8sdhn7zwjpxgzrxkmf4xxi"; depends=[assertthat dplyr future googleAuthR httr jsonlite purrr]; }; - googleVis = derive2 { name="googleVis"; version="0.6.9"; sha256="1smp85xjs0pda705m1d5kmfd138r57inz6pznljahwra72ix0f87"; depends=[jsonlite]; }; + googleVis = derive2 { name="googleVis"; version="0.6.10"; sha256="0jjqlcxfbpkl2kdpp8vr27yi178ryg62yy7rjafzda1npg010f3x"; depends=[jsonlite]; }; googledrive = derive2 { name="googledrive"; version="1.0.1"; sha256="0qbyl0wyrxmwn9jg0d2s7c1kmmvmx61qbyx3qby4js8dks70f1ls"; depends=[curl gargle glue httr jsonlite magrittr purrr rlang tibble uuid]; }; googleformr = derive2 { name="googleformr"; version="0.0.3"; sha256="0smykcjyqmk61ws5jk462l8x5hg0h9nwq55q5pqfgcq1j3yfniqh"; depends=[httr rvest xml2]; }; googlenlp = derive2 { name="googlenlp"; version="0.2.0"; sha256="0d0g18i3im2s5f14k69ym3vwf9a7zkaval3nwrip97xcl6kf4x9h"; depends=[dplyr httr jsonlite purrr readr rlang]; }; googler = derive2 { name="googler"; version="0.0.1"; sha256="1aayji3ncqxl58k29d93dbx05s9rp9bc63fl2cpl1cys7gilblxx"; depends=[jsonlite tibble]; }; googlesheets = derive2 { name="googlesheets"; version="0.3.0"; sha256="11q07nxys72wkxx9mawmjyf20gvwvrb7h3gpa73h6lgh2vgrwnv8"; depends=[cellranger dplyr httr jsonlite purrr readr stringr tibble tidyr xml2]; }; - googlesheets4 = derive2 { name="googlesheets4"; version="0.2.0"; sha256="0nkhhh4jg03f2d0iy1lmy6c8mfc3a7k6ixd8h3ngmcxw1g4pagbj"; depends=[cellranger curl gargle glue googledrive httr ids lifecycle magrittr purrr rematch2 rlang tibble vctrs]; }; + googlesheets4 = derive2 { name="googlesheets4"; version="0.3.0"; sha256="04b17cdzah2r92qj7imrdlpfzyxwyf1vx8k1kvsr36nqg383f4b2"; depends=[cellranger curl gargle glue googledrive httr ids lifecycle magrittr purrr rematch2 rlang tibble vctrs]; }; googleway = derive2 { name="googleway"; version="2.7.3"; sha256="0n2ybkjwwhq7kpyv0ryz4mp5w06psbcm2gyfwk0d3wp1i43ajsn4"; depends=[curl googlePolylines htmltools htmlwidgets jpeg jqr jsonlite magrittr scales shiny viridisLite]; }; - goric = derive2 { name="goric"; version="1.1-1"; sha256="0cqgcgsh3hc2zzyrczw66bbb4gg5xfkjslmrszwxbbn4zl9rkhpn"; depends=[MASS Matrix mvtnorm nlme quadprog]; }; + goric = derive2 { name="goric"; version="1.1-2"; sha256="004nx29wz191rp0naa73r762bf6lap931lwrxifhz7izl47jzfj0"; depends=[MASS Matrix mvtnorm nlme quadprog]; }; gorica = derive2 { name="gorica"; version="0.1.0"; sha256="09b5i6r2s449gvk0vagvf7kd6y0pgr4cz7hdwplq01x246bhjs6q"; depends=[bain lavaan lme4 MASS mvtnorm quadprog]; }; gotop = derive2 { name="gotop"; version="0.1.2"; sha256="1dvcgz7ha637ixjqmgcwhvl3f9kpx4fdq8im40iz8xwnxqwmrlgx"; depends=[htmltools jsonlite]; }; govStatJPN = derive2 { name="govStatJPN"; version="0.1"; sha256="03sywa7rl5rblvv370mfszz5ngp850qf32yydy1fdx10lv5amrfl"; depends=[]; }; - govdown = derive2 { name="govdown"; version="0.10.0"; sha256="0zkalxbalbaakyrxwd29yyfmzvdmpb9nfaqyqwj52v64nxgz1v4m"; depends=[rmarkdown]; }; + govdown = derive2 { name="govdown"; version="0.10.1"; sha256="00ndpp3v6z2497xlhhc92pa7w93qk9x8m6ibswj9dfh978d07028"; depends=[rmarkdown]; }; gower = derive2 { name="gower"; version="0.2.2"; sha256="0c9n921wn4hhlvjq96r4nkk96s5788376cbldr7y7bwz348200iz"; depends=[]; }; goxygen = derive2 { name="goxygen"; version="1.0.3"; sha256="0825zl16ap0k3jqhrjw4hfsw97ils77jmf4yqq347k3bb8i3dm79"; depends=[citation gms pander stringi yaml]; }; gpairs = derive2 { name="gpairs"; version="1.3.3"; sha256="08m1ydrr239vnhjbl47mng3i2w9bqmd8fijrwsraq5ysvn826n27"; depends=[barcode colorspace lattice MASS vcd]; }; gpbStat = derive2 { name="gpbStat"; version="0.3.0"; sha256="1mnmhjcnikjsxdvcb5kkh91zhlvj0h40ypazlkafd1z0yfmv52s4"; depends=[]; }; + gpboost = derive2 { name="gpboost"; version="0.6.0"; sha256="0war5nxpynd34r9zqacgwplj6nb9vyyrnpv2mnscil7486lr960q"; depends=[data_table Matrix R6 RJSONIO]; }; gpclib = derive2 { name="gpclib"; version="1.5-6"; sha256="11jjgg74l8hy9jz4jylhriqnzv8jcf12y1bkx22v29z3fhgkwkps"; depends=[]; }; gpg = derive2 { name="gpg"; version="1.2.2"; sha256="1qc7w4d6frp0j4yk0q7slkj1mps80bv78lixcpw1shgx48rp41kh"; depends=[askpass curl]; }; - gpindex = derive2 { name="gpindex"; version="0.2.3"; sha256="14glwrlkka9izg43wi82q8acsw2fii5i5iw81nyigzkycrix5yj2"; depends=[]; }; + gpindex = derive2 { name="gpindex"; version="0.2.5"; sha256="12jvjqpg2qhcxkynpfcr6ara8y3gll7nyxvkhgvzy6riq0jx227c"; depends=[]; }; gpk = derive2 { name="gpk"; version="1.0"; sha256="1zfhkqyypb24mhbj2zi9qy3gw0kqxvlp8j5ni3zm7k5rz1bnrygg"; depends=[]; }; + gplite = derive2 { name="gplite"; version="0.12.0"; sha256="1cm846jayqvb3xrd3h6pxq6wmww1ghhkr6dffschk0xycix6alw9"; depends=[Matrix Rcpp RcppArmadillo]; }; gplm = derive2 { name="gplm"; version="0.7-4"; sha256="0apvj14nl5qbi4dhhdx5nih5lvjwfcipvr8cyk6xsz4r5gfr2iw4"; depends=[AER]; }; gplots = derive2 { name="gplots"; version="3.1.1"; sha256="0f8khaymz383w2ksnk80d4kpnvgmdk37pbycpsnl2vabaz11kbpr"; depends=[caTools gtools KernSmooth]; }; - gpmap = derive2 { name="gpmap"; version="0.1.1"; sha256="00jhslbxbp6dgq7bw346hfpw0gans048vsn7chyzjhyr7ah5xrfg"; depends=[foreach ggplot2 isotone plyr]; }; + gpmap = derive2 { name="gpmap"; version="0.1.2"; sha256="1n1r4rda9v4zw8zz4vcagmkkpgirwydhqz36pyq0assxwclnkcz0"; depends=[foreach ggplot2 isotone plyr]; }; gppm = derive2 { name="gppm"; version="0.2.0"; sha256="1n9is3xj52lsck2fiy9j320p2ca6ib36s251i7g3iz99a77b0ahh"; depends=[ggplot2 ggthemes MASS mvtnorm Rcpp rstan]; }; gprofiler2 = derive2 { name="gprofiler2"; version="0.2.0"; sha256="0q8hl3gdxy34c0181ql405fdklz82nfvmwdcafd5mzf935rjpyjg"; depends=[crosstalk dplyr ggplot2 gridExtra jsonlite plotly RCurl tidyr viridisLite]; }; gptk = derive2 { name="gptk"; version="1.08"; sha256="0fk6c8f8fni4y2n2cbfwywlfyz74xlb8lx25wajsxr2v4x74pa7l"; depends=[fields Matrix]; }; @@ -9288,6 +9658,7 @@ in with self; { grade = derive2 { name="grade"; version="0.2-1"; sha256="085hfvqn880yk19axdjv3z9jr33kls212vs172a8mzhnkallph1r"; depends=[]; }; gradeR = derive2 { name="gradeR"; version="1.0.9"; sha256="052ficcrflplvm79v47hbqlh3z5b4kjq7zjms7i6hv2c3mmvbarr"; depends=[callr jsonlite testthat]; }; gradientPickerD3 = derive2 { name="gradientPickerD3"; version="0.1.0.0"; sha256="0b20iqfipr7migwk1fl4lvdf4ghprqivcgmchfshhr8q82hyd1q0"; depends=[htmlwidgets jsonlite shiny]; }; + grainchanger = derive2 { name="grainchanger"; version="0.3.2"; sha256="1anq9gmbf9cjh6f9q2h7f65j220f56rmb59zhp5j2d26bs7dbnz8"; depends=[checkmate furrr raster sf usethis]; }; grainscape = derive2 { name="grainscape"; version="0.4.3"; sha256="0mc9mgc70ysqal8pjslmr7dzig3d08jcdpba348hmgyh0w9b6s07"; depends=[ggplot2 igraph raster Rcpp rgdal sp]; }; gramEvol = derive2 { name="gramEvol"; version="2.1-4"; sha256="1am5nlnyawi4lybi10ag4fdhddvbwsdzrmr6f66bzspdpl4s26g9"; depends=[]; }; grangers = derive2 { name="grangers"; version="0.1.0"; sha256="15q8hv7p5g5m7v6lx6nq5394fa6p05xgawnsrn1v5aslmmbbzyvl"; depends=[tseries vars]; }; @@ -9295,11 +9666,11 @@ in with self; { granovaGG = derive2 { name="granovaGG"; version="1.4.0"; sha256="0khqlqc6jg9cpdq06g6jlpfjcw3m6rj40ipljfai8g1630ril6q4"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; }; grapes = derive2 { name="grapes"; version="1.0.0"; sha256="079b7w2xhb0a481s7qihhka0l9ydkjdph0865wjjkcbpr4775p26"; depends=[magrittr]; }; graph3d = derive2 { name="graph3d"; version="0.2.0"; sha256="1c4pmx37nf4nm6svrn9dqr50gb2fckx8635zg0n4gnzgdca1iyv4"; depends=[htmlwidgets lazyeval]; }; - graph4lg = derive2 { name="graph4lg"; version="1.0.1"; sha256="1nx2wws6rxb3rqjzfk0jim1kfgidfvghal51rjrbfknk585k1iaj"; depends=[adegenet diveRsity ecodist foreign gdistance ggplot2 igraph knitr MASS Matrix pegas rappdirs raster Rdpack rmarkdown sf sp spatstat stringr tidyr vegan]; }; + graph4lg = derive2 { name="graph4lg"; version="1.2.0"; sha256="0bfmi74hsd1hvvxls5a0gqdhxirjdzkjrpnq0p84na6sblmfbja6"; depends=[adegenet diveRsity ecodist foreign gdistance ggplot2 igraph knitr MASS Matrix pegas rappdirs raster Rdpack rmarkdown sf sp spatstat_core spatstat_geom spatstat_linnet stringr tidyr vegan]; }; graphTweets = derive2 { name="graphTweets"; version="0.5.3"; sha256="0jf52lclwvqgybdj6fknzx046bh6jgwxvqs4c5g1ii8f2lsz9y07"; depends=[combinat dplyr igraph magrittr purrr rlang tidyr zeallot]; }; grapherator = derive2 { name="grapherator"; version="1.0.0"; sha256="071by9b8figbsf4g0f8a8mgcdksjksc57mnlgggilw7py1yjnjlh"; depends=[BBmisc checkmate deldir ggplot2 lhs reshape2 vegan]; }; graphframes = derive2 { name="graphframes"; version="0.1.2"; sha256="1bv7d0sggwab4rd486ayw9gkb5ja5p5fin5pn92xnrmz8cgwsfxq"; depends=[forge sparklyr tibble]; }; - graphhopper = derive2 { name="graphhopper"; version="0.1.1"; sha256="192m008kj1nw6jwank709icgswx316pdwiv4jcffx744kjhxkgh8"; depends=[dplyr googlePolylines httr jsonlite magrittr tibble]; }; + graphhopper = derive2 { name="graphhopper"; version="0.1.2"; sha256="1zrnwh86jv37z07b6l1i94dgjn8k3b3a3f76gfjsyyxvlc64i76x"; depends=[dplyr googlePolylines httr jsonlite magrittr tibble]; }; graphicalExtremes = derive2 { name="graphicalExtremes"; version="0.1.0"; sha256="1cc4xcb72yci2gq2zn3g1nh3ba802anpymm0hajdbz3kb0wz1gyn"; depends=[igraph matrixcalc mvtnorm Rdpack]; }; graphicalVAR = derive2 { name="graphicalVAR"; version="0.2.4"; sha256="0hfldvw60cac0qdjfdpmx1kbdhhyqw2k0yscyyh886fwr4rvj800"; depends=[dplyr glasso glmnet igraph Matrix mvtnorm qgraph Rcpp RcppArmadillo]; }; graphkernels = derive2 { name="graphkernels"; version="1.6"; sha256="1gn3ihqz7m0rdvvc2fp7hsgq583wh5cnz7200a2ff89xc04zs3dc"; depends=[igraph Rcpp RcppEigen]; }; @@ -9308,13 +9679,15 @@ in with self; { graphql = derive2 { name="graphql"; version="1.5"; sha256="0zi1l93yk5rlgdy4j2nph14w0h8kgvnbzk9fi2jfys8s3fz54ksr"; depends=[jsonlite Rcpp]; }; graphscan = derive2 { name="graphscan"; version="1.1.1"; sha256="1dgjb0grdymhimdgwnddjcivgy2i9r1i1nni4v9mx0447skcahk9"; depends=[ape rgl snowfall sp]; }; graphsim = derive2 { name="graphsim"; version="1.0.1"; sha256="05v5jhb3fpd5vpb12b203mvs9lx25yhwfg5qavw6rc7pgj5z974i"; depends=[gplots igraph Matrix matrixcalc mvtnorm]; }; - gratia = derive2 { name="gratia"; version="0.4.1"; sha256="0gxqmnmcz1nlmmlhshfsz7cwjxcp2ha73bjgkb9s5wgwlflpng43"; depends=[cowplot dplyr ggplot2 mgcv mvnfast patchwork purrr rlang tibble tidyr vctrs]; }; - graticule = derive2 { name="graticule"; version="0.1.2"; sha256="1yvrijvyjilfql72dxj32b3sczqv065zj61729wrrzn63xcifvmb"; depends=[raster sp]; }; + grates = derive2 { name="grates"; version="0.1.2"; sha256="0ygfr53midprqs0ja21mm4g3ppd8gx1azxgzxz8iwp2bdzkrx9cg"; depends=[]; }; + gratia = derive2 { name="gratia"; version="0.6.0"; sha256="1425dq805a0hk1w243y0mzvdyqvi0n08ghwvsgfwdx3i0d066nba"; depends=[dplyr ggplot2 mgcv mvnfast patchwork purrr rlang tibble tidyr vctrs]; }; + graticule = derive2 { name="graticule"; version="0.1.6"; sha256="0y8cyhlfm8amdb23cvxy508mpd4d64xgnk1xlr37ss2pqrxdhpir"; depends=[geosphere quadmesh raster sp]; }; gratis = derive2 { name="gratis"; version="0.2.1"; sha256="035jk2nc8xs0n3ak6k6i42h5gw2n57rrrarb1xwb17khg05dzk25"; depends=[doRNG dplyr foreach forecast GA magrittr mvtnorm polynom purrr shiny tibble tsfeatures tsibble]; }; - grattan = derive2 { name="grattan"; version="1.9.0.0"; sha256="12vjqlmnymidkapa9zzbk1hcq6cac9669sdsrcaaqn3si0hq0i7l"; depends=[assertthat data_table fastmatch forecast fy hutils ineq magrittr Rcpp zoo]; }; + grattan = derive2 { name="grattan"; version="1.9.0.4"; sha256="06pzl5s5rgx8xjr0m6wm2p1lsvr7zmafdxxykjzy4m7bws3zhgij"; depends=[assertthat data_table fastmatch forecast fy hutils hutilscpp ineq magrittr Rcpp zoo]; }; gravitas = derive2 { name="gravitas"; version="0.1.3"; sha256="11n85bdmigqasbq8c1amj1k7manfvs3gnax2ihsf2vp56s9c463p"; depends=[dplyr ggplot2 ggridges ineq lubridate lvplot magrittr RColorBrewer rlang shiny stringr tibble tidyr tsibble]; }; gravity = derive2 { name="gravity"; version="0.9.9"; sha256="1x912mg7cnday7lji48mw9f5drd732qlnrq4d6d75s5pgfps91p6"; depends=[censReg dplyr glm2 lmtest magrittr MASS multiwayvcov purrr Rdpack rlang sandwich survival tibble tidyr]; }; grec = derive2 { name="grec"; version="1.4.1"; sha256="1vy3idjvayzx9j9pf5bv5bxycjca3w3c4x4lzzbrdi3c97508sa8"; depends=[imagine raster]; }; + greed = derive2 { name="greed"; version="0.5.0"; sha256="181fm85qyi3rsriqnlpp1pzarn7kcfy8ww1fz9rhs6g5vr9gncpz"; depends=[cba future ggplot2 ggpubr listenv MASS Matrix Rcpp RcppArmadillo RSpectra]; }; greekLetters = derive2 { name="greekLetters"; version="0.0.7"; sha256="0r6c4y6dnd3mm5i7y5cy7xz3w2j7qkfkkvxg9ig138has6115gjj"; depends=[assertthat stringr]; }; greenclust = derive2 { name="greenclust"; version="1.1.0"; sha256="198ix55x8cl5wx09p6ahzy3bvig86mvqf2qywjfilp6b4hnjgk7l"; depends=[]; }; gremlin = derive2 { name="gremlin"; version="1.0.1"; sha256="1pi1bksxmjmzclppgbqqg93swf4d72d2mr8bsxv7ndcdjr69xd5r"; depends=[Matrix nlme]; }; @@ -9324,7 +9697,7 @@ in with self; { gretel = derive2 { name="gretel"; version="0.0.1"; sha256="1yyj4aing56f2vy0gshxwb623g9idg8k4701v3s53lqn4m2ybazk"; depends=[Rcpp ResistorArray]; }; gretlR = derive2 { name="gretlR"; version="0.1.0"; sha256="0lpznicpjlvp5kkhmlfr4as7px545k416i3f54900jnc7xa7fm8p"; depends=[knitr]; }; grex = derive2 { name="grex"; version="1.9"; sha256="0s6nan76rrmh3yhgvzb7pqdrzx2w9px8ay4v9yiib4bamy9wmhpb"; depends=[]; }; - greybox = derive2 { name="greybox"; version="0.6.4"; sha256="0h9m7xzaknfkbgykj9xrb778pa86yaawh99a0m7fvzbspgig65dw"; depends=[forecast lamW Matrix nloptr pracma Rcpp statmod texreg zoo]; }; + greybox = derive2 { name="greybox"; version="0.6.9"; sha256="1isc25k2r54i53hdzfsg2pw2fvfgs7xggk8xh5733hzpfarfl8hf"; depends=[forecast lamW Matrix nloptr pracma Rcpp statmod texreg zoo]; }; greyzoneSurv = derive2 { name="greyzoneSurv"; version="1.0"; sha256="115i0d4fy4p4g4vd419hj9f23hi8cbiyfilgpgmag91ilr1xpcdp"; depends=[Hmisc survAUC survival]; }; grf = derive2 { name="grf"; version="1.2.0"; sha256="1i12a5sa1kg0jh50y0r77qy4fca3j1vqrnlblbh8ldpjy07sln47"; depends=[DiceKriging lmtest Matrix Rcpp RcppEigen sandwich]; }; gridBase = derive2 { name="gridBase"; version="0.4-7"; sha256="09jzw4rzwf2y5lcz7b16mb68pn0fqigv34ff7lr6w3yi9k91i1xy"; depends=[]; }; @@ -9339,18 +9712,19 @@ in with self; { gridtext = derive2 { name="gridtext"; version="0.1.4"; sha256="131kw7nkfwksviwfifd2kk7lyvhxzzzv1nnj8rahkr3dik3akk61"; depends=[jpeg markdown png Rcpp RCurl rlang stringr xml2]; }; gripp = derive2 { name="gripp"; version="0.2.20"; sha256="0rshipm8rdynl19a4dsvvvlhkd0n4vjfkidwnv5iilc5ini7c4qr"; depends=[GA GenSA usethis]; }; grizbayr = derive2 { name="grizbayr"; version="1.3.1"; sha256="1bsvk52r1zba553x20xkfdjyasyd6r3xrssqb6hrrmkaw6h2qg2m"; depends=[dplyr magrittr purrr rlang tibble tidyr]; }; + grmsem = derive2 { name="grmsem"; version="1.1.0"; sha256="0byyl1121acs90xbhgi4g4hnf4n259k7cg5grm6dyaxqkha3lyw7"; depends=[msm numDeriv optimParallel]; }; grnn = derive2 { name="grnn"; version="0.1.0"; sha256="1dxcmar42g9hz4zlyszlmmnnsnja0gxfggav5jxv0gkp32rkd0wh"; depends=[]; }; grobblR = derive2 { name="grobblR"; version="0.2.0"; sha256="0zx2lj7m873v5lkvv521q3vsrdqhzkw0zha63qiicqk896gy7isj"; depends=[dplyr ggplot2 glue gridExtra magrittr png purrr RCurl stringr tibble]; }; groc = derive2 { name="groc"; version="1.0.8"; sha256="0zxwq3ha3sa58v8fhb2s41nqqpsgr3q9j7arlww1zz295mrlrs5i"; depends=[MASS mgcv pls robustbase rrcov]; }; - gromovlab = derive2 { name="gromovlab"; version="0.7-6"; sha256="02s7x23610dbpmrqh7pimspa10v3fnmj48fwmh0a6igd74rmj2mg"; depends=[ape cluster glpkAPI igraph quadprog]; }; - groundhog = derive2 { name="groundhog"; version="1.0.0"; sha256="0laxdm52fbii50h3s01kk1frkprq24rn0z03ss54lriq6q4a9swr"; depends=[]; }; + gromovlab = derive2 { name="gromovlab"; version="0.8-3"; sha256="0mm303iiaqfdvr94x765dbd1018cvvl0q4z2zppwk1aif0kb53x8"; depends=[ape cluster glpkAPI igraph quadprog]; }; + groundhog = derive2 { name="groundhog"; version="1.4.0"; sha256="03l5c46k2h0ms2cx7vvdysm0kbbzcvkkppyv1nyfp48rh74a6gia"; depends=[]; }; groupICA = derive2 { name="groupICA"; version="0.1.1"; sha256="1wl828ligvvw55xic383gdn7aq4mbwsnkl4ym6f71jn5g3p36d0i"; depends=[MASS]; }; groupRemMap = derive2 { name="groupRemMap"; version="0.1-0"; sha256="1bfp746j0dx7kk44nyjqmimvgw14par9ayvqxnzldc05qsazjdwx"; depends=[]; }; groupWQS = derive2 { name="groupWQS"; version="0.0.3"; sha256="1c5yrsfgkhbg1fcjbrilfmf0phjry5z34536yfizc8wbc7mmmj0c"; depends=[glm2 MASS rjags Rsolnp]; }; - groupdata2 = derive2 { name="groupdata2"; version="1.3.0"; sha256="01bp7y78vzli178cikkaj48yvik690irxgni77if9dg3rz63gxg5"; depends=[checkmate dplyr lifecycle numbers plyr purrr rlang tibble]; }; + groupdata2 = derive2 { name="groupdata2"; version="1.4.1"; sha256="0yi64i39f5iw1wrdrxwn56vwcp63favv91s01pramwavnk03p31j"; depends=[checkmate dplyr lifecycle numbers plyr purrr rlang tibble tidyr]; }; grouped = derive2 { name="grouped"; version="0.6-0"; sha256="1glxgacpwk7yjbkwg5ci6bmb2il6hf5zhydwi5bbq6hc032m9976"; depends=[MASS]; }; groupedSurv = derive2 { name="groupedSurv"; version="1.0.4.2"; sha256="015av2087i0vxh3axl91crwvparhpc4w2p2j9fq7wylg1gsarraa"; depends=[BH doParallel foreach qvalue Rcpp RcppEigen]; }; - groupedstats = derive2 { name="groupedstats"; version="2.0.0"; sha256="1n8g5nhk71yq96hkb9159zmcizby4gcvi875jj745fyf3l01xwd1"; depends=[broomExtra dplyr effectsize glue lme4 magrittr parameters purrr rlang skimr tibble tidyr]; }; + groupedstats = derive2 { name="groupedstats"; version="2.0.1"; sha256="010dx96w49d8sq9mhvps1xqpsir156kj7azc1i7r3wq1x75b0vxr"; depends=[broomExtra dplyr effectsize glue lme4 magrittr parameters purrr rlang skimr tibble tidyr]; }; groupr = derive2 { name="groupr"; version="0.1.0"; sha256="1gych92dpyxg2vfm3h6djw61d9z2n6q2kvbz1xpq1p0zcyiw16gy"; depends=[dplyr purrr rlang tibble tidyr vctrs]; }; groupsubsetselection = derive2 { name="groupsubsetselection"; version="1.0.3"; sha256="118cj5xc8nbq4fs2gbzg1nhynixaflbl0si77gyy4ybw0drsz4nj"; depends=[]; }; grove = derive2 { name="grove"; version="1.1"; sha256="0fqsj5dx7py7cin3hvfkxglh8v3x0dwj6cxy4h5vbddjl687db5x"; depends=[Rcpp RcppArmadillo wavethresh]; }; @@ -9365,10 +9739,11 @@ in with self; { grpSLOPE = derive2 { name="grpSLOPE"; version="0.3.0"; sha256="0v20v3rdjmz517rl86nkrsaa1dl2p49kdkgk7ynv92p2ib37wwga"; depends=[Rcpp]; }; grplasso = derive2 { name="grplasso"; version="0.4-7"; sha256="0jf48ahc6d6biwx235dlvbk1papxkqbcnvxsr93p5047pjm02y3a"; depends=[]; }; grplassocat = derive2 { name="grplassocat"; version="1.0"; sha256="0pi5vq7yqg0ha91y6296ckshxyq3135cg6zcs9x6xba5m5024k4p"; depends=[grplasso]; }; - grpreg = derive2 { name="grpreg"; version="3.3.0"; sha256="0ns5xg5nmzq4nvzj3vy5xazxxzs36kqp056c8kcz1l4vcmi3rjfp"; depends=[Matrix]; }; + grpreg = derive2 { name="grpreg"; version="3.3.1"; sha256="1985afwzlydr82xy5siawfs87k041iv6l76xhb5yfpx4klnj0zph"; depends=[Matrix]; }; + grpsel = derive2 { name="grpsel"; version="1.0.0"; sha256="0hdxcbh6rnvrhlgwy8csip4k5xlaynhxkyasi0pv37mz25am812k"; depends=[ggplot2 Rcpp RcppArmadillo]; }; grr = derive2 { name="grr"; version="0.9.5"; sha256="0arbcgrvhkwb5xk4nry1ffg2qj0v8ivhjghdr505ib4357g0c9i9"; depends=[]; }; grt = derive2 { name="grt"; version="0.2.1"; sha256="1dw5rjs82r82l6qryyyq9cczm770v4iv60d7pi1nb4b0733ndbd5"; depends=[MASS]; }; - gsDesign = derive2 { name="gsDesign"; version="3.1.1"; sha256="17sm1rqvp39apjxb35mhq7rjv70nanqsihv4h5m7cyx8nkxmviyj"; depends=[dplyr ggplot2 mvtnorm plyr rlang tibble xtable]; }; + gsDesign = derive2 { name="gsDesign"; version="3.2.0"; sha256="0w1gr4k2sl46q8wr84zgpc5aj0ir2yizp7bahjv5himrvyq0wjv3"; depends=[dplyr ggplot2 magrittr rlang tidyr xtable]; }; gsEasy = derive2 { name="gsEasy"; version="1.3"; sha256="00471kfjb6zw3n4nbx3a91xjn748hw3xpl9pq5sgbrf6xg9gcf7c"; depends=[ontologyIndex Rcpp]; }; gsalib = derive2 { name="gsalib"; version="2.1"; sha256="1k3zjdydzb0dfh1ihih08d4cw6rdamgb97cdqna9mf0qdjc3pcp1"; depends=[]; }; gsarima = derive2 { name="gsarima"; version="0.1-5"; sha256="0nmn4hlvhl8dw7pkpf010x9qjd6w8drdlcj47qv0sap8wngrwhzg"; depends=[MASS]; }; @@ -9378,6 +9753,7 @@ in with self; { gscounts = derive2 { name="gscounts"; version="0.1-3"; sha256="1xcsvnam858l9am30mmqb6m0vcflijhli22ix8g56rcvfsh208q1"; depends=[Rcpp]; }; gset = derive2 { name="gset"; version="1.1.0"; sha256="1gingqw6la8n7mnl47wpz9sicxca4zi2m8p35n6cnihrniibhajc"; depends=[Hmisc MCMCpack mvtnorm]; }; gsheet = derive2 { name="gsheet"; version="0.4.5"; sha256="0b8q44cqkjfy6vnffm94czq4ag8xfbxik52026ahq95kcf9v2j91"; depends=[httr stringr]; }; + gsignal = derive2 { name="gsignal"; version="0.3-1"; sha256="0qs934ijykwyk7fx0n9m0861349mbpgq0i5kymsxcglrdc8q6k4m"; depends=[pracma Rcpp]; }; gsisdecoder = derive2 { name="gsisdecoder"; version="0.0.1"; sha256="1h7a9j4gsdk8nasfkzfizlarx335ra0j0yz98a2000v2qzm2a5qy"; depends=[Rcpp]; }; gsl = derive2 { name="gsl"; version="2.1-6"; sha256="0p4rh7npp6qbfc5sxjq86xjn7c9ivf3pd60qf1hldwckjqin7m7m"; depends=[]; }; gsloid = derive2 { name="gsloid"; version="0.1.0"; sha256="1ma5si86ynfsis0pnw8hyv6xc4frbkhy5ks03mr0z16gasffkycg"; depends=[]; }; @@ -9385,7 +9761,7 @@ in with self; { gsrsb = derive2 { name="gsrsb"; version="1.1.1"; sha256="0yjxzc69ihsx5ni6jb4shsvl9vskqlls3gmpckmzx5nsh1l5s5vb"; depends=[ldbounds mvtnorm xtable]; }; gss = derive2 { name="gss"; version="2.2-2"; sha256="1r0zq8ingrjkd775nkmr8jixzmx0sasfha4nzw677vkq8f4xm90x"; depends=[]; }; gstar = derive2 { name="gstar"; version="0.1.0"; sha256="1582f7jcphb32j3wdc345qa5sgm2xyimlc6r5r5jay7ca5ll8c98"; depends=[dplyr ggplot2 reshape2 xts zoo]; }; - gstat = derive2 { name="gstat"; version="2.0-6"; sha256="1azw1fwphwbakaqhdn4qmigcmblcdnbkm83rg29g4k24la5fc4b7"; depends=[FNN lattice sp spacetime zoo]; }; + gstat = derive2 { name="gstat"; version="2.0-7"; sha256="17d95f4s49a8v197ij8ppvl55fc63v1z2qsisniw8hl17gj7q6z8"; depends=[FNN lattice sp spacetime zoo]; }; gsubfn = derive2 { name="gsubfn"; version="0.7"; sha256="00j6b8b6xsx6v370h220x233rpk6asca78165y3d48jpwvwisdc9"; depends=[proto]; }; gsw = derive2 { name="gsw"; version="1.0-5"; sha256="0lv4x4is53xybgg205dncizpnqnakqk47b5wgys2kr4ixqc8jipb"; depends=[testthat]; }; gsynth = derive2 { name="gsynth"; version="1.0.9"; sha256="1m9s3gymm0z6frfzmz7kv8cbdnla2vp4aam5b2zzcxwflzwbplm3"; depends=[abind doParallel foreach GGally ggplot2 MASS mvtnorm Rcpp RcppArmadillo]; }; @@ -9395,13 +9771,15 @@ in with self; { gtable = derive2 { name="gtable"; version="0.3.0"; sha256="1lyncxf2dqdjgw1071cn9c8zwzkz6sldnd5cgmicf70bc726qf7x"; depends=[]; }; gtcorr = derive2 { name="gtcorr"; version="0.2-1"; sha256="1n56zmyv58jwr95p453jb86j82pdnq57gfc8m15jndjc9p31zl0m"; depends=[]; }; gte = derive2 { name="gte"; version="1.2-2"; sha256="1x528iakyjhh4j92cgm6fr49a3rdi4cqy28qhsfr2dwvxzxchl6h"; depends=[survival]; }; - gtfs2gps = derive2 { name="gtfs2gps"; version="1.3-2"; sha256="0vw4ccvszwiwklj9z50cjmvv1yaw2mm3npfgw2gvi2w10bv6z3fv"; depends=[data_table furrr future lwgeom magrittr pbapply progressr raster Rcpp rgdal rgeos sf sfheaders sp units zip]; }; + gtfs2gps = derive2 { name="gtfs2gps"; version="1.4-1"; sha256="18505hkgjlk14ldp0l9k2s9mg4z0zri08qdwja933z4mkw5kcjjs"; depends=[data_table furrr future lwgeom magrittr pbapply progressr raster Rcpp readr rgdal rgeos sf sfheaders sp units zip]; }; + gtfsio = derive2 { name="gtfsio"; version="0.1.0"; sha256="0wxrp5km6gxv8i4l8ah2yzbfwbgc6shaxyr6hs1dppch1sa7xknr"; depends=[data_table zip]; }; gtfsrouter = derive2 { name="gtfsrouter"; version="0.0.4"; sha256="1hzln0a8lmsk5ia37w75dcbcfc61ykf39qd5b0xyfzhkm3fih0cv"; depends=[cli data_table Rcpp]; }; + gtfstools = derive2 { name="gtfstools"; version="0.1.0"; sha256="02v455r1a9rf2hqpw0a547jvbx6hrb26jwhjx68spmh9rrc5zpkz"; depends=[checkmate data_table sf sfheaders units zip]; }; gtheory = derive2 { name="gtheory"; version="0.1.2"; sha256="1xc1jl69z5csalqk3hx83s53awcl1fjq6p0x2pczhs7dsvwd6lks"; depends=[lme4]; }; gtools = derive2 { name="gtools"; version="3.8.2"; sha256="1pnwy412wvhhvnnx8qg6s9hrgcnsfhnfcpf2560ipipk845acfsh"; depends=[]; }; gtop = derive2 { name="gtop"; version="0.2.0"; sha256="1nvvbf181x0miw3q0r2g0nklz29ljdsd07cazaajfls7pmhi0xw9"; depends=[hts lassoshooting quadprog]; }; - gtrendsR = derive2 { name="gtrendsR"; version="1.4.7"; sha256="1w0b8xcnkx8lnn2a9cc6z7jxbpyfk3lrysf0rz299yykgb6iczc6"; depends=[anytime curl ggplot2 jsonlite]; }; - gtsummary = derive2 { name="gtsummary"; version="1.3.5"; sha256="01yzv1n1l60q1p8psxxwwbmszh9q691h1nkyv0kaqmni6y9jk8gy"; depends=[broom broom_mixed dplyr forcats glue gt knitr lifecycle magrittr purrr rlang stringr tibble tidyr tidyselect usethis]; }; + gtrendsR = derive2 { name="gtrendsR"; version="1.4.8"; sha256="00qzwlasi6l56raf4d7w3287qzhmq5j3aqi7zcxv11kl33nbnams"; depends=[anytime curl ggplot2 jsonlite]; }; + gtsummary = derive2 { name="gtsummary"; version="1.4.0"; sha256="1a41r7ad2ssawwkq10qk07mj7nnv73l2rhwr7fl3adxzabimkh72"; depends=[broom broom_helpers cli dplyr forcats glue gt knitr lifecycle purrr rlang stringr survival tibble tidyr]; }; guaguas = derive2 { name="guaguas"; version="0.1.0"; sha256="10f5kbd03szx2pmmcm2zjjv8zkm0hdf0lk3s91yk40x80s2bxccs"; depends=[tibble]; }; guardianapi = derive2 { name="guardianapi"; version="0.1.1"; sha256="17xmmr6pfzhdnmf45jzvk84gbfnmlw1qfv1gqjaw85vgm8b6jn6l"; depends=[dplyr httr jsonlite rlang tibble]; }; guess = derive2 { name="guess"; version="0.1"; sha256="198pxi0yipgm9wccpj3y4a0gkibhyxcmb7v5dz7ipzrk44ha5g6j"; depends=[Rsolnp]; }; @@ -9416,22 +9794,24 @@ in with self; { gvcR = derive2 { name="gvcR"; version="0.1.0"; sha256="0r54924b9a65k11p8y3p7jxbvmpb7s7vs87v65hhl98gxacj5hk8"; depends=[dplyr eda4treeR lme4 magrittr]; }; gvcm_cat = derive2 { name="gvcm.cat"; version="1.9"; sha256="1kwfcmnl1ivv1lh3zxccwls2xfyx3l8v71ngc0bg6441i81d4xp5"; depends=[MASS Matrix mgcv]; }; gvlma = derive2 { name="gvlma"; version="1.0.0.3"; sha256="16dhd407bwjs91c3p9kk43646197s7n9vbyghxb4ckrpv3fsaxp0"; depends=[]; }; + gwaRs = derive2 { name="gwaRs"; version="0.3.0"; sha256="1mjwsf1sbrd88psiz6f74zddv1wvhpxk5nxbfjpdrxs74rkc36fs"; depends=[data_table dplyr ggplot2 ggrepel RColorBrewer scales tidyr]; }; gwasforest = derive2 { name="gwasforest"; version="1.0.0"; sha256="122fg4pc409lvw4yvrc8ijm6d6j29b4aacd319a16caxkkydgwlb"; depends=[colorspace data_table dplyr ggplot2 ggrepel glue]; }; gwdegree = derive2 { name="gwdegree"; version="0.1.1"; sha256="0p06hjp7vay83kbpqsgfr1d8z3ayv483rxbv86fdka94gvi1sjyc"; depends=[dplyr ergm ggplot2 gtools magrittr network scales shiny shinydashboard sna tidyr]; }; - gwer = derive2 { name="gwer"; version="2.1"; sha256="0vhqw12qk5a21nzs4x2cvl2hzwcbmbzghnxajda9pz5r3vcvl8v2"; depends=[assertthat glogis maptools Matrix sp spData spdep spgwr]; }; + gwer = derive2 { name="gwer"; version="3.0"; sha256="0jiq5v37mbn6y7vl5gs8qahb796jrfqj0m54sd38vim8yhhjwfy8"; depends=[assertthat glogis GWmodel maptools Matrix sp spData spdep spgwr]; }; gwerAM = derive2 { name="gwerAM"; version="1.0"; sha256="1c3rzd1jf52a4dn63hh43m9s9xnjvqn67amlm9z1ndrnn6fwfg1b"; depends=[MASS Matrix]; }; gwfa = derive2 { name="gwfa"; version="0.0.4"; sha256="0jz82d9lfyd07z0jjlfqzsg7a3vnyz0s1j0rrb5sg9pnvcfjk9qy"; depends=[Rcpp sp]; }; + gwpcormapper = derive2 { name="gwpcormapper"; version="0.1.2"; sha256="0wlr8iw9hb06va9nswiz5335gi9af2mg0gh5w13kkr8knz4c7d9f"; depends=[attempt config corpcor crosstalk dplyr DT geodist glue golem htmltools leaflet pkgload plotly processx Rcpp sf shiny shinydashboard shinyjs viridis]; }; gwrpvr = derive2 { name="gwrpvr"; version="1.0"; sha256="0x15nv2pfv99c04lgs6q6hgczarld34xc4aqw9bn179m7j02v6m3"; depends=[]; }; gwrr = derive2 { name="gwrr"; version="0.2-1"; sha256="1fjk217pimnmxsimqp9sn02nr1mwy3hw3vsr95skbfsd6vdda14d"; depends=[fields lars]; }; - gwsem = derive2 { name="gwsem"; version="2.0.7"; sha256="0pzg0fzxkf2i8br57yfdz05xjkb3cvag7whya1skhnxgi4w4wkhz"; depends=[BH data_table lifecycle OpenMx qqman Rcpp]; }; + gwsem = derive2 { name="gwsem"; version="2.1.0"; sha256="0b27bns30y948bfy40009c4f4n10m5irl94g576gasydpj36ia47"; depends=[BH data_table lifecycle OpenMx qqman Rcpp]; }; gym = derive2 { name="gym"; version="0.1.0"; sha256="0vcwzgawqwjsf65hr1mbjkz3px8zsibfkn42jpsg39n13jpfjq8v"; depends=[httr jsonlite]; }; h2o = derive2 { name="h2o"; version="3.32.0.1"; sha256="0rmba0yn1ghh9201rn8q948bkx3wi0gwvavwn51h5kxfwj0in5l6"; depends=[jsonlite RCurl]; }; h2o4gpu = derive2 { name="h2o4gpu"; version="0.2.0"; sha256="06d2rrr27xvnsai6zjiaiw0jjfzdza1cc39c03d6pjkvnh0mqh2c"; depends=[magrittr reticulate]; }; - hBayesDM = derive2 { name="hBayesDM"; version="1.0.2"; sha256="04p4d0hy2l6bmxyh2k5q0g19b7fbpsl9frmcvrf5rxkaasxyxwn6"; depends=[BH data_table ggplot2 loo Rcpp RcppEigen rstan StanHeaders]; }; + hBayesDM = derive2 { name="hBayesDM"; version="1.1.1"; sha256="16ilkmhyb7lgfd8s2qhjg952gfwkmfg154w4nw306j988a2ivc6h"; depends=[BH data_table ggplot2 loo Rcpp RcppEigen rstan StanHeaders]; }; hIRT = derive2 { name="hIRT"; version="0.3.0"; sha256="0s0i6p9iv0yv0l15dnwkpcmc91751jyjs1y1nz671lz6jpb8rz5c"; depends=[ltm Matrix pryr rms]; }; hJAM = derive2 { name="hJAM"; version="1.0.0"; sha256="1pnjcn54zi4d7h9zc9wr1gv51dzb0vasfcrw4c1kqymhxsq2yfh3"; depends=[dplyr ggplot2 ggpubr reshape2]; }; hNMF = derive2 { name="hNMF"; version="1.0"; sha256="08xn9i24dcykvbcsqzmk33li5fm1alkvcmq2fp0a2ysw4lvwfwqs"; depends=[MASS NMF nnls oro_nifti rasterImage]; }; - hR = derive2 { name="hR"; version="0.2.41"; sha256="0xy4m6dibdmjvh81amp81cq6aa0ffsry9gjrkpm476mchsym2ip7"; depends=[data_table knitr rhandsontable shiny]; }; + hR = derive2 { name="hR"; version="0.2.50"; sha256="1zslalsb2zi6b91fb2k1m0vsbsdazls2gnnl7gv2xqvn6kdh4nf6"; depends=[data_table knitr rhandsontable shiny]; }; hSDM = derive2 { name="hSDM"; version="1.4.1"; sha256="1jwqjzr0zpckzh2jpqh17v6ypq4mzn5khlv6p37y59zz8bh9mvxp"; depends=[coda]; }; haarfisz = derive2 { name="haarfisz"; version="4.5"; sha256="1qmh4glwzqwqx3pvxc71rlcimp1l0plgdf380v9hk0b4gj7g3pkf"; depends=[wavethresh]; }; hablar = derive2 { name="hablar"; version="0.3.0"; sha256="12gm5n3p2kmjwhkf60n4bjn3lrj7lrs5sgmvads9sfp2ckhaiysk"; depends=[dplyr lubridate purrr]; }; @@ -9440,7 +9820,7 @@ in with self; { hadron = derive2 { name="hadron"; version="3.1.2"; sha256="04qd3lb6im5shf24ss88jkskab1rwn7m2d94x0ybbmfcg3l5dhm0"; depends=[abind boot dplyr R6 Rcpp stringr]; }; hagis = derive2 { name="hagis"; version="3.1.1"; sha256="15hv1ib516i4bkjr5d6xqagzjs9vd8hv7nylq29h57kxms0mddzl"; depends=[data_table ggplot2 pander]; }; hail = derive2 { name="hail"; version="0.1.1"; sha256="1nrc9msqyy5iq2i6p8875anbqswxl2z6vdd4hvihnl22qh5fnbvh"; depends=[]; }; - hal9001 = derive2 { name="hal9001"; version="0.2.6"; sha256="1yzxskv4bvawss4vlcb2gh2v43jcnx799xnqrx37zhjd34wpm2w4"; depends=[assertthat glmnet Matrix origami Rcpp RcppEigen]; }; + hal9001 = derive2 { name="hal9001"; version="0.2.7"; sha256="0hbrsyw2245bi967iza9ywiw3d4b3533gjsa9nryzivrf6lazb3g"; depends=[assertthat data_table glmnet Matrix origami Rcpp RcppEigen]; }; haldensify = derive2 { name="haldensify"; version="0.0.6"; sha256="086p3an0m3mccf14p6bl6s01xvh24wkb4p39vgdyrsf83318d0h8"; depends=[assertthat data_table future_apply ggplot2 hal9001 matrixStats origami Rdpack]; }; halfcircle = derive2 { name="halfcircle"; version="0.1.0"; sha256="1gbqbv3cn8w09i3f2ji3qq0snb4fy9243y12agw686fx46dfmhxs"; depends=[scales]; }; hamlet = derive2 { name="hamlet"; version="0.9.6"; sha256="076fh28grlrv38qywshi79m84jsz1ck9k4n0rg4svvr3gqkdbcn2"; depends=[]; }; @@ -9451,7 +9831,6 @@ in with self; { hapassoc = derive2 { name="hapassoc"; version="1.2-8"; sha256="0qs5jl0snzfchgpp6pabncwywxcmi743g91jvjiyyzw0lw85yv4s"; depends=[]; }; haplo_stats = derive2 { name="haplo.stats"; version="1.8.6"; sha256="1imz4gs0n57vixwwbirrihpgvn2pyj5da4rgjcjk14n2xkk0nay7"; depends=[arsenal rms]; }; haploR = derive2 { name="haploR"; version="4.0.2"; sha256="1s9019683fgp6sxxjigr5rkpkdj3lxn576a8w067sh6k66138w31"; depends=[DT httr plyr RCurl RJSONIO RUnit tibble XML]; }; - haploReconstruct = derive2 { name="haploReconstruct"; version="0.1.2"; sha256="17zdl9c3yy6jdzv1wp0ailbga456pmmybzxh3dldymhj8qf32cx0"; depends=[data_table dbscan foreach gplots igraph matrixStats stringi zoo]; }; haplotyper = derive2 { name="haplotyper"; version="0.1"; sha256="0pcshlh29c4zazhkcq4371kqh9inrbx494y5a1qb1k2c92fkax31"; depends=[]; }; haplotypes = derive2 { name="haplotypes"; version="1.1.2"; sha256="07grdwli0kxnnnf7mg8z7gjpny88h71vf867g50f08yybgb46y70"; depends=[ape network phangorn plotrix sna]; }; happybiRthday = derive2 { name="happybiRthday"; version="0.0.1"; sha256="0rrvi5kx09p74xwxvqcwibbh4qjlk4jxb89grx74chjxk9ak2yv8"; depends=[data_table dplyr gh lubridate tidyr]; }; @@ -9465,8 +9844,9 @@ in with self; { hashids = derive2 { name="hashids"; version="0.9.0"; sha256="0233qly4rb1g4znxm9h9h8gskzrjyav6nd26xkdl7990m5hcbcwh"; depends=[]; }; hashr = derive2 { name="hashr"; version="0.1.3"; sha256="0xbwzhvg77ch4na9ylb8y8nghmpy38dxcvn4g6g6adarm3lbm4ck"; depends=[]; }; hasseDiagram = derive2 { name="hasseDiagram"; version="0.1.3"; sha256="1r9z6jc9lbdj2xc81gpnbswrl8rhs8zrlsnypfrny40g3j402iap"; depends=[graph Rgraphviz]; }; - haven = derive2 { name="haven"; version="2.3.1"; sha256="03cypgqhdkrfbfpl1yx2wb7flczrbak1w654wkicmd5ajwr9zvkf"; depends=[forcats hms Rcpp readr rlang tibble tidyselect vctrs]; }; + haven = derive2 { name="haven"; version="2.4.1"; sha256="1san6dc7kg2wy6f1jr5p1br28zdrand8wwgg7p6xxnx45h773320"; depends=[cpp11 forcats hms readr rlang tibble tidyselect vctrs]; }; hawkes = derive2 { name="hawkes"; version="0.0-4"; sha256="1ghwq3icxwmrai3xn9r8cnvlh3z3j18lznhw1bm31h9mkkp2dk0a"; depends=[Rcpp RcppArmadillo]; }; + hawkesbow = derive2 { name="hawkesbow"; version="1.0.2"; sha256="0abbarpwlbasgmp0cr8144x2aqkmqf2i99pqd9g9sp9bxbg66056"; depends=[BH nloptr Rcpp RcppArmadillo]; }; hazer = derive2 { name="hazer"; version="1.1.1"; sha256="1d1qj6mamgxlvxq2hjik69zfzackjz5819iss98jf5gdbdngw41x"; depends=[]; }; hazus = derive2 { name="hazus"; version="0.1"; sha256="1c0ahjdy9di1683nk5k4rmr6rhb66523ny039nyv842rgqdy625j"; depends=[reshape2]; }; hbbr = derive2 { name="hbbr"; version="1.1.2"; sha256="09sph4vliyb63pd0abq02ix5wz373r70kgldw44fm279zq4z772h"; depends=[R2jags]; }; @@ -9485,7 +9865,7 @@ in with self; { hdbm = derive2 { name="hdbm"; version="0.9.0"; sha256="0lvaica195chl6bb10wvvr7fbmh8b954fpxcm9r0gyp0d0i2a2w4"; depends=[Rcpp RcppArmadillo]; }; hdd = derive2 { name="hdd"; version="0.1.0"; sha256="0hnqjfp78s8fiabibf0dl57sj170ri1ysf7pyrk45z4qsnizbyn2"; depends=[data_table fst readr]; }; hddplot = derive2 { name="hddplot"; version="0.59"; sha256="18llkpawm12cjxlcrlra60m16virfpjqiaqkvy9mb3wq1zif61rh"; depends=[MASS multtest]; }; - hddtools = derive2 { name="hddtools"; version="0.9.1"; sha256="0i5jqj0gb2yjf22rslicfdpwf9r1b917b9pi21d55qbpnj63r8jm"; depends=[curl raster readxl rgdal rnrfa sp tidyr XML zoo]; }; + hddtools = derive2 { name="hddtools"; version="0.9.4"; sha256="011yhs8c6riimz63pa2am56n5aip2yk5gryx2amvk29pzp1v6my9"; depends=[curl raster readxl rgdal sp tidyr XML zoo]; }; hdf5r = derive2 { name="hdf5r"; version="1.3.3"; sha256="0i8m4yjxggrs05slq2afvz2ckl1yc9wq7gd1s7dq2gjn46zkry50"; depends=[bit64 R6]; }; hdfqlr = derive2 { name="hdfqlr"; version="0.6-1"; sha256="1z8sylaaki8ab9k7m4hp3530rnkxjh39zvw4n962fw5fb9a11dx3"; depends=[]; }; hdi = derive2 { name="hdi"; version="0.1-7"; sha256="1q58bvlqh59hv3vb3dw92r0w1nwyifnqm5ccss54fzmf2gjsj1cj"; depends=[glmnet linprog MASS scalreg]; }; @@ -9495,42 +9875,43 @@ in with self; { hdme = derive2 { name="hdme"; version="0.3.3"; sha256="1i6ixzl8kkj7jlj5q40xhbblw5a64fq0gfy6z6174fn2h8f4dqkj"; depends=[ggplot2 glmnet Rcpp RcppArmadillo Rdpack Rglpk]; }; hdnom = derive2 { name="hdnom"; version="6.0.0"; sha256="0wszxxfz5xkyqd3xgc9g3d5iwwsfkq9517bgp416h6l31ynxxrwn"; depends=[foreach ggplot2 glmnet gridExtra ncvreg penalized survAUC survival]; }; hdpGLM = derive2 { name="hdpGLM"; version="1.0.0"; sha256="04mn0cbbx66218rsd273yh29h28f1xl8k0whwlyn6hrg035mlk0x"; depends=[coda data_table dplyr formula_tools ggjoy ggplot2 ggpubr ggridges Hmisc isotone LaplacesDemon magrittr MASS MCMCpack mvtnorm purrr questionr Rcpp RcppArmadillo rprojroot stringr tibble tidyr tidyverse]; }; - hdpca = derive2 { name="hdpca"; version="1.1.3"; sha256="09h96wm6r6w1imkm4k9bg5l0vcq2yvbp6iqx786x99ds8jzppsb9"; depends=[boot lpSolve]; }; - hdrcde = derive2 { name="hdrcde"; version="3.3"; sha256="0c2qbw4c3mq1cb068kjs72rxlbibz8svwcrx853jyr8ybs23z7ab"; depends=[ash ggplot2 KernSmooth ks locfit RColorBrewer]; }; + hdpca = derive2 { name="hdpca"; version="1.1.5"; sha256="0xcakpnp363lz98y3h87p1yhj0gs3f94gx2i8kz4mcizn1ll5xbd"; depends=[boot lpSolve]; }; + hdrcde = derive2 { name="hdrcde"; version="3.4"; sha256="16qlk44cjvn2s0vzaf915df65ksdx20dbxhy7fpdqins46hccha3"; depends=[ash ggplot2 KernSmooth ks locfit RColorBrewer]; }; hds = derive2 { name="hds"; version="0.8.1"; sha256="1smg5ixrl7f2x3wn7s5i26dyadn5sigpf4jsk236z1bhnz617ax4"; depends=[survival tensor]; }; healthcareai = derive2 { name="healthcareai"; version="2.5.0"; sha256="05qsmgrnaagnavlrs9c6j01j9c3lcc9j7cmbrx3y6lb6pf4zs195"; depends=[caret cowplot data_table dplyr e1071 generics ggplot2 glmnet lubridate MLmetrics purrr ranger recipes rlang ROCR stringr tibble tidyr xgboost]; }; healthfinance = derive2 { name="healthfinance"; version="0.1.0"; sha256="163zhdd5mqp0q872dmr3xzw2ppapnwp46rr7vkkfnglz635nxvpz"; depends=[ggplot2 lubridate readr scales shiny tibble]; }; healthforum = derive2 { name="healthforum"; version="0.1.0"; sha256="13ih00amv9hrpngm6pxc8vzqzhx8c0yqgaprxdcp5li90lg5r3av"; depends=[magrittr purrr rvest stringr tokenizers xml2]; }; - healthyR = derive2 { name="healthyR"; version="0.1.1"; sha256="18id31pb0ja0d41fklzv4zbbly2rk4yfwx8r5mb1g270dccadr6s"; depends=[cowplot dplyr ggplot2 lubridate magrittr purrr rlang scales stringr tibble timetk writexl]; }; - healthyR_data = derive2 { name="healthyR.data"; version="1.0.0"; sha256="1xsbvv21s01wrkag4njbh428019nl47pp7722b6gazqd9a855yhp"; depends=[]; }; + healthyR = derive2 { name="healthyR"; version="0.1.2"; sha256="0mfgrspd8j0ywhcjcwbpjd11slmfgsbisis0a48jvqm0br9c76x6"; depends=[cowplot dplyr ggplot2 lubridate magrittr purrr rlang scales sqldf stringr tibble timetk writexl]; }; + healthyR_data = derive2 { name="healthyR.data"; version="1.0.1"; sha256="18b7aqdy9a0ldf2ib2d0a07k6bfmgdp61y8hl8yl19v35nqj6dvh"; depends=[]; }; + healthyR_ts = derive2 { name="healthyR.ts"; version="0.1.1"; sha256="16kafzg8zykwbraxciz2yn1iz7is0bn7bqszsnffs5206a92hhvn"; depends=[dplyr ggplot2 healthyR_data lubridate magrittr modeltime modeltime_ensemble modeltime_resample plotly purrr rlang stringr tibble tidyquant timetk]; }; + healthyverse = derive2 { name="healthyverse"; version="1.0.0"; sha256="17xiqjvsfzy450vsxhr5dnydwcl88qqgfqhpy7za4c46q6c2f70p"; depends=[cli crayon dplyr healthyR healthyR_data healthyR_ts magrittr purrr rlang rstudioapi tibble]; }; heatex = derive2 { name="heatex"; version="1.0"; sha256="0c7bxblq24m80yi24gmrqqlcw8jh0lb749adsh51yr6nzpap6i9n"; depends=[]; }; - heatmap_plus = derive2 { name="heatmap.plus"; version="1.3"; sha256="0rzffm15a51b7l55k0krk6w7v8czy3vpwz1qmbybr7av0pln7wn3"; depends=[]; }; - heatmap3 = derive2 { name="heatmap3"; version="1.1.7"; sha256="1gdjc5b4f4nf5zpfdl0ch352p3bwbcw5hkd5vlarxvb2qkf9pcxs"; depends=[fastcluster]; }; + heatmap3 = derive2 { name="heatmap3"; version="1.1.9"; sha256="0sfvizmmwfk1bjhn6zfx5a4qqfgj1ldg8x90b65crqibgfa36k2r"; depends=[fastcluster]; }; heatmapFit = derive2 { name="heatmapFit"; version="2.0.4"; sha256="1rswp1wp58f21fpyjybcvvmnn53kr54ij83hp05qbvl7yn1fsnrb"; depends=[]; }; - heatmaply = derive2 { name="heatmaply"; version="1.1.1"; sha256="02fv66h61y55bn5wrnlvhj7v6xwqs3pddyp3jgk554s1zv4qs2fr"; depends=[assertthat colorspace dendextend egg ggplot2 htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; }; - heatwaveR = derive2 { name="heatwaveR"; version="0.4.4"; sha256="0d2j2qmfm5q0g57hrfkmd5mf5n4cinldh5l234nfk1ykf8s2aak3"; depends=[data_table dplyr ggplot2 lubridate plotly plyr Rcpp RcppArmadillo RcppRoll tibble zoo]; }; + heatmaply = derive2 { name="heatmaply"; version="1.2.1"; sha256="0hspfkninwy62sf8gkdcsvwnvl66bbnjs2dpah9rr95a3rsgdp9d"; depends=[assertthat colorspace dendextend egg ggplot2 htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; }; + heatwaveR = derive2 { name="heatwaveR"; version="0.4.5"; sha256="0pcw305mxxy1abp4n9kh59gqd0axnlhhagnzzm5cfp2m5zs343iy"; depends=[data_table dplyr ggplot2 lubridate plyr Rcpp RcppArmadillo RcppRoll tibble]; }; heavy = derive2 { name="heavy"; version="0.38.196"; sha256="05k788ynw9fhhmjydzp8dbk1vhl44j2rz2shqwn02i40jmwdvwrk"; depends=[]; }; heddlr = derive2 { name="heddlr"; version="0.6.0"; sha256="0ixmcgvfbq4hi3wv1fyzpwacmxmixsw5yq6mq5xygk6ji03m1v23"; depends=[rlang utf8 yaml]; }; hedgehog = derive2 { name="hedgehog"; version="0.1"; sha256="1mvjnm2zlc4pvw9vnhxr0dj1g1sfqvlrnnhcipzfbvr147yan9l5"; depends=[rlang testthat]; }; - heemod = derive2 { name="heemod"; version="0.14.0"; sha256="0b520v7lgmj0vvp42997dknjvn7sa9zkbgkc634b859pbsc0h192"; depends=[dplyr ggplot2 lazyeval memoise mvnfast plyr pryr purrr rlang tibble]; }; + heemod = derive2 { name="heemod"; version="0.14.2"; sha256="0cp5xp5n678x9nqkj3ydcmq1fwxqdvy044vnrrz3d769zzjaa58b"; depends=[dplyr ggplot2 lazyeval memoise mvnfast plyr pryr purrr rlang tibble]; }; heims = derive2 { name="heims"; version="0.4.0"; sha256="0vnq31jwn09grni4gdhf1hzd87b62as4f65b2qw7ky6mi38ahr5d"; depends=[bit64 data_table fastmatch hutils lubridate magrittr]; }; - helda = derive2 { name="helda"; version="1.1.3"; sha256="0ffy1cy6p98r23gz0avqbwpr7q3b76mmgic6y8dipfkbs7zqcdv6"; depends=[dplyr ggplot2 rlang sqldf stringr]; }; + helda = derive2 { name="helda"; version="1.1.5"; sha256="0wza0l52l4ijpasrm3czfncajvcc3p2y2ljmp61xxmn38hhvqyk9"; depends=[dplyr ggplot2 rlang sqldf stringr]; }; helixvis = derive2 { name="helixvis"; version="1.0.1"; sha256="113rnpnrcnw18ks78fgq79zdrw3kmpzpimlc45gvj0za2fbyci3p"; depends=[ggforce ggplot2 rlang]; }; hellno = derive2 { name="hellno"; version="0.0.1"; sha256="1j787rw9hh75bvkckmlz5xkgwc22gd7si3mgjd7v60dd6lykfa88"; depends=[]; }; helloJavaWorld = derive2 { name="helloJavaWorld"; version="0.0-9"; sha256="1a8yxja54iqdy2k8bicrcx1y3rkgslas03is4v78yhbz42c9fi8s"; depends=[rJava]; }; - helminthR = derive2 { name="helminthR"; version="1.0.7"; sha256="16dkmxs94h48d07c73jznjgg368j9291m98xi7fbbjn4d4cqm7mm"; depends=[httr knitr magrittr plyr rmarkdown rvest xml2]; }; + helminthR = derive2 { name="helminthR"; version="1.0.8"; sha256="1fy2pwqirpa6ja035sb6a7779ikix4klxdad82bjzhcsxj8s9irv"; depends=[httr knitr magrittr plyr rvest taxize xml2]; }; helsinki = derive2 { name="helsinki"; version="0.9.29"; sha256="0bn5iyxjn9qs6f0dmhv51ssayywbx1rayh80zbzk0gsm94nhs0d9"; depends=[maptools RCurl rjson sp]; }; - heplots = derive2 { name="heplots"; version="1.3-7"; sha256="1p98gvp3q71qphd3hgr79y7l4mgq2kyyqwrbykcnckjz2a9xsfmy"; depends=[car MASS]; }; + heplots = derive2 { name="heplots"; version="1.3-8"; sha256="0ziws8l74svz5swyk9i0db5lsdhnkx0gjc5hdvk31m145cg29w5x"; depends=[car MASS]; }; here = derive2 { name="here"; version="1.0.1"; sha256="0srlr8h8qmr0wrmp7gs4g2ry5dni2hx8n947bik3s3a26f091v88"; depends=[rprojroot]; }; - hereR = derive2 { name="hereR"; version="0.5.2"; sha256="1sb0v3qyd6s4kibsq8by4fy291px6zg10hnzg6dqs9xm5h94yhhg"; depends=[curl data_table flexpolyline jsonlite sf stringr]; }; + hereR = derive2 { name="hereR"; version="0.7.0"; sha256="0f40dnd3yqw6bhj6dp57iismvj0kl1dcxi4yh47byzakl1w58c2m"; depends=[crul curl data_table flexpolyline jsonlite sf stringr]; }; + hergm = derive2 { name="hergm"; version="4.1-7"; sha256="0q05383xj4fprg2j4nm73rc19vwnvcg9kl4w28zlqih3kkybwv0h"; depends=[ergm igraph intergraph latentnet Matrix mcgibbsit mlergm network Rcpp sna stringr]; }; heritEWAS = derive2 { name="heritEWAS"; version="0.2.0"; sha256="0yss9vf2m9szq8xi5i2nhf85mfvzvhv6c1f4kvvb2z9lmaicjni5"; depends=[]; }; heritability = derive2 { name="heritability"; version="1.3"; sha256="0a0pw8hppkgypl4jaa38hks9nxfwz2zbsd4w6w40j1hxlyy4km8m"; depends=[MASS]; }; hermite = derive2 { name="hermite"; version="1.1.2"; sha256="0j9s7ayvbvmgwybrvf703b72qbn8gskb105pis19ig2sslllzda3"; depends=[maxLik]; }; - hermiter = derive2 { name="hermiter"; version="2.0.0"; sha256="0dnk3n9cd4s14iwvgdj68qq0kqsfsspj1zbimv1v90prm42nb6b4"; depends=[BH Rcpp]; }; + hermiter = derive2 { name="hermiter"; version="2.0.3"; sha256="0vq39kfr8hpxsijg6452bx47yzaqqv69mx612pp97z0a0kllg2a2"; depends=[BH Rcpp]; }; hero = derive2 { name="hero"; version="0.4.7"; sha256="129v2pjbxm5aalr5lfx0kh20rhwksnb80pc459pxg0xkwxvy1l3d"; depends=[fields Matrix optimx pbapply rgeos sp]; }; - hesim = derive2 { name="hesim"; version="0.4.2"; sha256="14m0svdrgdcmm9vwnhmwiavzz9m1hi52s627mk456a9zjns07041"; depends=[data_table flexsurv MASS msm R6 Rcpp RcppArmadillo survival]; }; - het_test = derive2 { name="het.test"; version="0.1"; sha256="08kxp81dx32anh0k5b65x7w7madwnn9hiabdrk6ck6b6mx37x26v"; depends=[vars]; }; - hetGP = derive2 { name="hetGP"; version="1.1.2"; sha256="0r7hzw6ccyrqpq51adljd2ljv9dl00c0dr8frjrhibpzpc68z3sz"; depends=[DiceDesign MASS Rcpp]; }; + hesim = derive2 { name="hesim"; version="0.5.0"; sha256="0hha6z0hwlpjd7vgn4wdpvrv85h7nnx9gy9g7wcclnx6w3irmdih"; depends=[data_table flexsurv ggplot2 MASS msm R6 Rcpp RcppArmadillo survival]; }; + hetGP = derive2 { name="hetGP"; version="1.1.3"; sha256="02anpqpvzmlk7hbprzb2laya2xz4n249jbk941w72fm4xc2ci4nf"; depends=[DiceDesign MASS Rcpp]; }; hett = derive2 { name="hett"; version="0.3-3"; sha256="0i7q28nc67m62vi1ipfg035yqjh691fb1mp33dp1b68g5wjysphh"; depends=[lattice MASS]; }; hettreatreg = derive2 { name="hettreatreg"; version="0.1.0"; sha256="092xd2yndg5n5shxmcyn2gh6a6w1i1497cvj009ih3ax8hk3crf0"; depends=[]; }; hettx = derive2 { name="hettx"; version="0.1.1"; sha256="0zfxg88l83pzj37c5khpv4vi0v28fdnp0p8yz39scm8d8lya1dkm"; depends=[doParallel dplyr foreach formula_tools MASS moments mvtnorm plyr purrr quantreg tidyverse]; }; @@ -9539,7 +9920,7 @@ in with self; { heuristicsmineR = derive2 { name="heuristicsmineR"; version="0.2.4"; sha256="0dp85yvn0fr22l174ff34pv9xfxh3d7na9dxim2z7f4ialdnialw"; depends=[BH bupaR data_table DiagrammeR dplyr ggplot2 ggthemes magrittr petrinetR processmapR purrr Rcpp rlang scales stringr tidyr]; }; hexSticker = derive2 { name="hexSticker"; version="0.4.9"; sha256="0d9sz2cshn4lq18kd9fkgvjm3v29h0k22b6228rq2q3zhxi97ra0"; depends=[ggimage ggplot2 hexbin showtext sysfonts]; }; hexView = derive2 { name="hexView"; version="0.3-4"; sha256="01hiqyibsd4as7jcklzg09pl12la341mg561vn16z4jzdarfvkfc"; depends=[]; }; - hexbin = derive2 { name="hexbin"; version="1.28.1"; sha256="1ry6jm3lqz3mj0s5rzbs6mpkz2hxpnvbw8c1vwc4pj7b173r5l22"; depends=[lattice]; }; + hexbin = derive2 { name="hexbin"; version="1.28.2"; sha256="0bbhs5pwxh474w62sq6gqvih7habancxng9wd4f2rgn6lv9zhhb2"; depends=[lattice]; }; hextri = derive2 { name="hextri"; version="0.6"; sha256="05rvigi225npncbr1brc6apc7gsg9a5jzcbmhvflwp3hbcg3hn02"; depends=[FNN hexbin]; }; hflights = derive2 { name="hflights"; version="0.1"; sha256="1rb6finck13i6949i6hsgfk90q4ybxh1m3is2mlw2m6087bpzfbd"; depends=[]; }; hglasso = derive2 { name="hglasso"; version="1.2"; sha256="1qq41ma33wz7qjs5zx72yvngpsiq62z9sd6d5hvvl83brq0fcr4b"; depends=[fields glasso igraph mvtnorm]; }; @@ -9549,10 +9930,11 @@ in with self; { hgutils = derive2 { name="hgutils"; version="0.2.7"; sha256="1svxhz80h84wn1fj58p8g3rp553ima1wfdbbkm2cqnihwjxhha62"; depends=[crayon dplyr limSolve magrittr stringr]; }; hhh4contacts = derive2 { name="hhh4contacts"; version="0.13.1"; sha256="1cqwn09iqgh6131cm4b5j0kx7k5vil0ak42v064g4maayj0yqy7p"; depends=[surveillance]; }; hhi = derive2 { name="hhi"; version="1.2.0"; sha256="1yl52c3nqdi8v60sr01l0vv8359803dm2i4c9ifazgj3h3a4h0yp"; depends=[ggplot2]; }; - hht = derive2 { name="hht"; version="2.1.3"; sha256="022a8zz2m34q89h29jglfj21knlqd8dwi85qmsi78ly1vacnzap8"; depends=[EMD fields spatstat]; }; + hht = derive2 { name="hht"; version="2.1.4"; sha256="0i4rjr507k555pvf7q6y6b3df56rjc6igrv8dk0mhyfws49jw9m9"; depends=[EMD fields spatstat spatstat_core spatstat_geom spatstat_linnet]; }; hiPOD = derive2 { name="hiPOD"; version="1.0"; sha256="1i15ickz2s0kffh99qq30pl5hsl0lbj0kp55jnbv4x72hndzhmla"; depends=[rgl]; }; hiddenf = derive2 { name="hiddenf"; version="2.0"; sha256="0shc1kfiq527mkc5i97zcm51hsvknnhjg7dyfvbfqyk145v6sz00"; depends=[]; }; hier_part = derive2 { name="hier.part"; version="1.0-6"; sha256="15wlpb2rsn6am8galsbjiy4psp78nlv1x2hz3cnqbwj508w6gsj0"; depends=[betareg gtools MASS]; }; + hierBipartite = derive2 { name="hierBipartite"; version="0.0.2"; sha256="1f6agxrv363wksi33b29v42hys90351ninb4li9m52n0kzv25m1f"; depends=[irlba magrittr]; }; hierDiversity = derive2 { name="hierDiversity"; version="0.1"; sha256="1n4jg003h9hvr2n43jwxgfpazvc5ij5lqvspxi49w8fpzpcrqrjj"; depends=[]; }; hierNet = derive2 { name="hierNet"; version="1.9"; sha256="0fdnj50s985w06wrjc67hcy6fc4lj8jbxlskgrli9m0181vbdj69"; depends=[]; }; hierarchicalDS = derive2 { name="hierarchicalDS"; version="3.0"; sha256="16d6l3y21nhynfjk4swp3pnjr6vhcxq369djgxz907zsjby35gkz"; depends=[coda ggplot2 Matrix mc2d MCMCpack mvtnorm rgeos truncnorm xtable]; }; @@ -9562,28 +9944,28 @@ in with self; { hiertest = derive2 { name="hiertest"; version="1.1"; sha256="17maf1w4vkqknxff3f00fzv136j3dbbigyzl4vq4sln9j27w10r3"; depends=[]; }; highD2pop = derive2 { name="highD2pop"; version="1.0"; sha256="1s4v6m2d3vzvxsgmjzczv1zj3kv3ygvv6gbkkbjwsdhkvc1rdmf0"; depends=[fastclime]; }; highDmean = derive2 { name="highDmean"; version="0.1.0"; sha256="0z81iw1nb8y4pvmhk8ay9pq4kvqxwxwv8q6p47hy8s2b465sfy1f"; depends=[]; }; - highSCREEN = derive2 { name="highSCREEN"; version="0.3"; sha256="179l82n7l7dfn40k6zgigw56ggwqyi34gllc2wvcw3yvfnd3l7s4"; depends=[gplots]; }; + highSCREEN = derive2 { name="highSCREEN"; version="0.4"; sha256="1nd4jayfhz89kpk4i7s3n3wlza1ik4w3gspplnjmfz951f8i3wlg"; depends=[gplots]; }; highTtest = derive2 { name="highTtest"; version="1.1"; sha256="18hgxlr0y8y1d4ldqmfcg4536lhyn5p6w88sq1vj74qr5wzydga1"; depends=[]; }; highcharter = derive2 { name="highcharter"; version="0.8.2"; sha256="1hwiifpm60kqgxlvp8zd6mhgbzc4mkcz9s9yc6byrm9i6daiqs8r"; depends=[assertthat broom dplyr htmltools htmlwidgets igraph jsonlite lubridate magrittr purrr quantmod rjson rlang rlist stringr tibble tidyr xts yaml zoo]; }; - highfrequency = derive2 { name="highfrequency"; version="0.7.0.1"; sha256="13avypm8pq73zizrqknb060s2cj31bbhywz8z8x9vxlckhs393r2"; depends=[cubature data_table mvtnorm quantmod Rcpp RcppArmadillo RcppRoll robustbase sandwich xts zoo]; }; + highfrequency = derive2 { name="highfrequency"; version="0.8.0.1"; sha256="16gb6gj1wda1r5kb1mc5h95w5ir4989mhlprlmfclvbz0pf86ilj"; depends=[cubature data_table mvtnorm numDeriv quantmod Rcpp RcppArmadillo RcppRoll robustbase Rsolnp sandwich xts zoo]; }; highlight = derive2 { name="highlight"; version="0.5.0"; sha256="1shar4y07wyixg0ichdrn2xhgwkl3mv2pxkalqzisc69w605b3hf"; depends=[]; }; highlightHTML = derive2 { name="highlightHTML"; version="0.2.5"; sha256="0j3zrvil7k5wfsbgfj2b4nbx77qsj3b4makv5angcf8s59p7q80r"; depends=[]; }; highmean = derive2 { name="highmean"; version="3.0"; sha256="1lq7z0l1737j4wvsy7951405afylyywp7vf2i7girzh459fdfzpc"; depends=[MASS mnormt mvtnorm]; }; - highr = derive2 { name="highr"; version="0.8"; sha256="0my6idnhmmgs4q1vs40y2lh56yij2p59mpwvm53wjs2zk6x1zl2b"; depends=[]; }; - highriskzone = derive2 { name="highriskzone"; version="1.4.5"; sha256="09ad025ydpfsrkcfqsfm4cj6lk8shrdh6vyya7isqwrd5jfyf1qc"; depends=[deldir fields ks maps Matrix mvtnorm rgeos spatstat]; }; + highr = derive2 { name="highr"; version="0.9"; sha256="0kgdv2vf1lz3b5kbal9s83gg6812nw7fvrq0rkyr0v4k1lwi3zxy"; depends=[xfun]; }; higlasso = derive2 { name="higlasso"; version="0.9.0"; sha256="09d500jsxlrv658i90xnb2wj1ad89v1iwb6y7vascyvg3cff104h"; depends=[gcdnet gglasso purrr Rcpp RcppArmadillo]; }; higrad = derive2 { name="higrad"; version="0.1.0"; sha256="0q9av8qyvmvgy6a3l7svcmbkjjgnp4iny1cld4g3qsbaz3yp3jaj"; depends=[Matrix]; }; hilbertSimilarity = derive2 { name="hilbertSimilarity"; version="0.4.3"; sha256="1251df3q7c7c69f8q9y9bxj210bk2dh80c8ca4s58isf0hr2x7zp"; depends=[entropy Rcpp]; }; hildareadR = derive2 { name="hildareadR"; version="0.2.0"; sha256="0hay1r6lxnyzjp97456d9wra7myrmifyx8cywzc85wclm355yc9b"; depends=[dplyr haven]; }; - hillR = derive2 { name="hillR"; version="0.5.0"; sha256="00ms1clypd52w921l9ny73kqwim80chjfmbxjsxxgyj9pfardl2d"; depends=[ade4 ape FD geiger plyr tibble]; }; + hillR = derive2 { name="hillR"; version="0.5.1"; sha256="0yz2f3zz28k36f6afya5cg7k6kvyz6nzafr53pw6liy086nfrb9n"; depends=[ade4 ape FD geiger plyr tibble]; }; hilldiv = derive2 { name="hilldiv"; version="1.5.1"; sha256="1jp4xvrpqd575y2x0i73s0bq708bzi6gdhqgz85bia6d5kf05lq9"; depends=[ape data_table FSA geiger ggplot2 ggpubr qgraph RColorBrewer scales vegan]; }; hillmakeR = derive2 { name="hillmakeR"; version="0.2"; sha256="1baynibgn4xqmpsxna8irggxvdc484mq5nza00rwg58vh1bc7wzq"; depends=[]; }; + himach = derive2 { name="himach"; version="0.1.2"; sha256="07gsyjlhz5li9qmvx7jjfxcp60b707hyasqwcczw10xxp9mykczf"; depends=[cppRouting data_table dplyr geosphere ggplot2 lwgeom s2 sf sp tidyr]; }; hindex = derive2 { name="hindex"; version="0.2.0"; sha256="01mcd2br33qqkfcyxl584f3l6kyb2cgzpd207p0mynzdaallgxgc"; depends=[foreach ggplot2 purrr]; }; hindexcalculator = derive2 { name="hindexcalculator"; version="1.0.0"; sha256="06b4dn629avmnyqxb0l39m00wz9cg9dddmm6qhgwgnzlxh14ifgk"; depends=[]; }; hint = derive2 { name="hint"; version="0.1-1"; sha256="1n18j2hcb1qynhsln10nzryi20l5aqhr7i1aanww10y5dz573zi3"; depends=[]; }; hiphop = derive2 { name="hiphop"; version="0.0.1"; sha256="0k071kxf04b95f3z5y2h9dhnqrvzwgyhi3q26ghn3s76c155f1k1"; depends=[]; }; hipread = derive2 { name="hipread"; version="0.2.2"; sha256="1y51yif2spl6brqjvb20k9r6xwkr5f6brv08qcl4g9xg561yngff"; depends=[BH R6 Rcpp rlang tibble]; }; - hisse = derive2 { name="hisse"; version="1.9.10"; sha256="0sic9f0h4wdyai8vcl6lpkz4ris02xf64f0lw77zcmfmn29cp139"; depends=[ape data_table deSolve diversitree GenSA nloptr phytools plotrix subplex]; }; + hisse = derive2 { name="hisse"; version="1.9.18"; sha256="0r231nq71b69zsibmiwi1y7zsw7z6i2gkxp9nyxar59319q2vax2"; depends=[ape data_table deSolve diversitree GenSA nloptr phytools plotrix subplex]; }; histmdl = derive2 { name="histmdl"; version="0.7-1"; sha256="0k6l3pfjzlgpxv55vy8dg4sl8zhh0460xcfszwp2k9sbzanwaamp"; depends=[]; }; histogram = derive2 { name="histogram"; version="0.0-25"; sha256="0yymc7fw4qkbigr8jiw2nzjyrw0ikkipz62pdn3bpz1f7nb7mi93"; depends=[]; }; historydata = derive2 { name="historydata"; version="0.1"; sha256="1h69x3iig542d43p9zm8x83p4dq48iwsw606j4fndnqhx99vzkw6"; depends=[]; }; @@ -9595,6 +9977,8 @@ in with self; { hkdatasets = derive2 { name="hkdatasets"; version="0.0.3"; sha256="0sfgqr6g9nk3v6df9hssavk4pn7ax837xflg1kgyxpvqssn8iiyl"; depends=[]; }; hkevp = derive2 { name="hkevp"; version="1.1.4"; sha256="01m5yywi4vjnwhdayaqaqcp5lz70mllj5ifnwdb4c60wm9aby9pm"; depends=[Rcpp RcppArmadillo]; }; hkex_api = derive2 { name="hkex.api"; version="0.1"; sha256="0hqwihlrppchpaz2yaq92gf779yi5k8n7sxy1kbpjxs2qc18xvj2"; depends=[httr RCurl XML]; }; + hlaR = derive2 { name="hlaR"; version="0.1.0"; sha256="1xk3b0wkwybx0n3bnyxb9jmnqk9vfxs1fcsbpx7lq7xvbv5j8x7n"; depends=[devtools dplyr here purrr readr readxlsb reshape2 schoolmath stringr tibble tidyr tidyverse usethis]; }; + hlidacr = derive2 { name="hlidacr"; version="0.1.3"; sha256="042fwsx57d2c73x17iwhx18jm65kzivp4cx3s7gi56zxxg3jzpdx"; depends=[curl glue httr jsonlite purrr stringr urltools usethis]; }; hmclearn = derive2 { name="hmclearn"; version="0.0.5"; sha256="0zalvgnibd1kygryqcah5d008y6a0nxpy61yyiqsriw89r01jyjk"; depends=[bayesplot MASS mvtnorm]; }; hmeasure = derive2 { name="hmeasure"; version="1.0-2"; sha256="0l4nlny532kddiaa1nmgd37971whhwzb54mb1pvbwax7fsg6hmhw"; depends=[]; }; hmgm = derive2 { name="hmgm"; version="1.0.3"; sha256="12gaz2pi9ny7y772yzrfvl02p3n89cq1l5dzmcksd172gv9ayyz1"; depends=[binaryLogic glmnet MASS Matrix nat Rcpp rgl]; }; @@ -9603,15 +9987,16 @@ in with self; { hmm_discnp = derive2 { name="hmm.discnp"; version="3.0-6"; sha256="0jb4ga50d0qy9kz13qjsbwbvyhn8qiqsjsai2m6kvxb7qzd33g26"; depends=[nnet]; }; hmma = derive2 { name="hmma"; version="1.1.0"; sha256="1qsvczqq44h46z0nfblv4rarbg64imz8m0jhxdhva27kbzdvqf97"; depends=[bnlearn graph MCMCpack mhsmm Rgraphviz]; }; hmmm = derive2 { name="hmmm"; version="1.0-4"; sha256="1sbr85lcmcw3lv0ygqwfbarr91dp3br1xnlygy49145cvl93nfci"; depends=[MASS mvtnorm nleqslv quadprog]; }; - hms = derive2 { name="hms"; version="0.5.3"; sha256="1baki0qw5ijgiflvsdvqj3apg4yanf12vx14kwbqdzk5rz46fasf"; depends=[pkgconfig rlang vctrs]; }; + hms = derive2 { name="hms"; version="1.0.0"; sha256="0qn9lvpkqrpxck88nf0zbff43vd7d6s1ibg58qfr3w14sw1yj14p"; depends=[ellipsis lifecycle pkgconfig rlang vctrs]; }; hmstimer = derive2 { name="hmstimer"; version="0.1.0"; sha256="1b2k18gm9fka8hsm1hhhplk7gj6w9s3sjh686kxbrci3a4mcb0g5"; depends=[hms lifecycle]; }; hnp = derive2 { name="hnp"; version="1.2-6"; sha256="12cbc353ipr2rcc93skf1766g38j1pvpdkqk3cswv0cxsjl2x7pl"; depends=[MASS]; }; hoa = derive2 { name="hoa"; version="2.1.4.1"; sha256="152vz6cddphmxvm7vi6f3b7jjpib0nsb6qv2k1wrmfrpvv3hgsxx"; depends=[statmod survival]; }; hoardeR = derive2 { name="hoardeR"; version="0.9.4-2"; sha256="1jdxfalmi4p7gwb7jndxbzbklv1fk0c57shnl4jz27s81lndg437"; depends=[bamsignals Biostrings data_table GenomicRanges GenomicTools_fileHandler httr IRanges KernSmooth knitr MASS R_utils RCurl rmarkdown Rsamtools S4Vectors seqinr stringr XML]; }; hoardr = derive2 { name="hoardr"; version="0.5.2"; sha256="0m6wfs78jpxk2jnlqdbg5x7i993j70bvaxm643qhb8axwbq174c1"; depends=[digest R6 rappdirs]; }; + hockeystick = derive2 { name="hockeystick"; version="0.5.0"; sha256="0bqq5ml3v242lwy9ipc2cjddp9a28svy0qyhpjc1aqs06qx7yx1h"; depends=[dplyr ggplot2 lubridate patchwork rappdirs readr rvest scales tibble tidyr]; }; holdem = derive2 { name="holdem"; version="1.2"; sha256="0mcb4civ4p7apm7kfl88apvb4yznsmn4hggfggmjhs046g6bi2p7"; depends=[]; }; holodeck = derive2 { name="holodeck"; version="0.2.1"; sha256="1iazi5is41ap58vq56jgz88id0i6ppz55y9gx77a5navrrn0db4l"; depends=[assertthat dplyr MASS purrr rlang tibble]; }; - homals = derive2 { name="homals"; version="1.0-8"; sha256="0gad0jmflw5zmzf9hk5qqmxxpbncm9gngsi24i3rgiz7565kli1r"; depends=[ape rgl scatterplot3d]; }; + homals = derive2 { name="homals"; version="1.0-9"; sha256="055hhpbypaw1cdkqvn4i43kbamsym4sk0jg4wlczln1x48smjwic"; depends=[ape scatterplot3d]; }; homeR = derive2 { name="homeR"; version="0.3.0"; sha256="0gi383392rs7snb2l9760vkws5hqfikyaj3i7cyby9g1sc2s6yx8"; depends=[]; }; hommel = derive2 { name="hommel"; version="1.5"; sha256="15c5az35zwmj6g0pxycfr4jnlc5ykllly0xk8gbdv7yk5m23my6d"; depends=[Rcpp]; }; homologene = derive2 { name="homologene"; version="1.4.68.19.3.27"; sha256="0d7wxisk0vqk1n165v1i19bc02zv78h5r5d3jqai5y6nkmwn01sh"; depends=[dplyr magrittr purrr R_utils readr]; }; @@ -9628,7 +10013,7 @@ in with self; { hotspot = derive2 { name="hotspot"; version="1.0"; sha256="0a4w5d6rg324hd06lfwr1hxf6bwr10n55s3ynz5bpkh9c61yik3n"; depends=[]; }; hotspots = derive2 { name="hotspots"; version="1.0.3"; sha256="12v88k3yz1bsxx9p5dx8y54ccqcglwknm2jr7ybygdj2yasjr5l0"; depends=[ineq lattice]; }; housingData = derive2 { name="housingData"; version="0.3.0"; sha256="0ngfx2vjx705xixzpz0rgx1481cr2szj4yfi5g7ma1hhivddl7d1"; depends=[]; }; - hover = derive2 { name="hover"; version="0.1.0"; sha256="04jq9rpj7ni6l7qfxxvv5pm5dadcd711q08dvjhngcksrxzx2zi2"; depends=[htmltools shiny]; }; + hover = derive2 { name="hover"; version="0.1.1"; sha256="09lpga8a87h6fyg0j3av4xjna300ifsx2ygzwsnvh2l1d70fwf8m"; depends=[htmltools shiny]; }; howmany = derive2 { name="howmany"; version="0.3-1"; sha256="045ck8qahfg2swbgyf7dpl32ryq1m4sbalhr7m5qdgpm62vz8h7f"; depends=[]; }; hpa = derive2 { name="hpa"; version="1.1.3"; sha256="1dq7jvgr3i0k43fzy2bd16ld0k9ficm2ypkbzj25pii95nx0rr6n"; depends=[Rcpp RcppArmadillo RcppParallel]; }; hpackedbubble = derive2 { name="hpackedbubble"; version="0.1.0"; sha256="1br7q4958f1zgvisglsaf41nz2ahnqi3bzazvlfnmk3nq03cb1ri"; depends=[htmlwidgets]; }; @@ -9640,49 +10025,52 @@ in with self; { hrIPW = derive2 { name="hrIPW"; version="0.1.3"; sha256="1ns0mxkcfs2jva4wsbqkybgasgyxvxlcfxayky6lrfhic8jxvmg4"; depends=[survival]; }; hrbrthemes = derive2 { name="hrbrthemes"; version="0.8.0"; sha256="057h60b5p53dcyjyfwlgjc1ry968s9s64dw78p443w8717zk7zpc"; depends=[extrafont gdtools ggplot2 htmltools knitr magrittr rmarkdown scales]; }; hrcomprisk = derive2 { name="hrcomprisk"; version="0.1.1"; sha256="0w0ij2yqgg6gkn3pdaism1xqw3dfnm670j2pmsd85qk1ybxzq9l5"; depends=[survival]; }; - hscovar = derive2 { name="hscovar"; version="0.4.0"; sha256="087q3mx6zb5rpycq86v6g3d4x8m24r2ma2s1f4532frl3pg8xcj5"; depends=[foreach Matrix pwr rlist]; }; + hrt = derive2 { name="hrt"; version="1.0.0"; sha256="0pvxm2jqw6bamyjf827nawnfhj2ysy743qlx8fmdjdacmkj2va64"; depends=[CompQuadForm Rcpp RcppEigen]; }; + hscovar = derive2 { name="hscovar"; version="0.4.2"; sha256="06bkqcp0vcnkp0jqi0qjvxnw0lk0w4mrf88h1769ak7r49vzlr6f"; depends=[foreach Matrix pwr rlist]; }; hsdar = derive2 { name="hsdar"; version="1.0.3"; sha256="1slb2m62j86hn1kvpv72fvp48sxl7zb2znrr70jqqbrah8n1ynnl"; depends=[Boruta caret raster rgdal signal]; }; - hse = derive2 { name="hse"; version="0.0-14"; sha256="0m0lk3a6f3vbvmdnallmzr85rap0hh9qvkx7x21jidn94sah9mbd"; depends=[]; }; + hse = derive2 { name="hse"; version="0.0-28"; sha256="14w09wm1kk7b4q8cl5cwjfqvzm2fb4ls8qjw6i0l54184fmw4dah"; depends=[]; }; hsicCCA = derive2 { name="hsicCCA"; version="1.0"; sha256="1d4lkjrihwhl3jrsj7250ccd90nfwpllyavc3mp15fhcy2jnjci8"; depends=[]; }; hsm = derive2 { name="hsm"; version="0.2.0"; sha256="066shjikqrrkxpnra4zknax1a0sk5nx9ms1br58vwqqvqq479rym"; depends=[]; }; hsmm = derive2 { name="hsmm"; version="0.4"; sha256="1fh8c5kfv4brygdq6bfkrhrhkm99mxl4ljb1mhp9nf2bjlla11mc"; depends=[mvtnorm]; }; hsphase = derive2 { name="hsphase"; version="2.0.2"; sha256="1b62k9sc6604djy37anslvqjpbrj9wsc9mvnfbrnmhqf4g0nnpdq"; depends=[Rcpp RcppArmadillo snowfall]; }; - hsrecombi = derive2 { name="hsrecombi"; version="0.3.2"; sha256="132wmgr910d0gr9pd3pc9fm0wdzks085f32k5wag61xyfkpnjhvc"; depends=[data_table dplyr hsphase quadprog Rcpp rlist]; }; + hsrecombi = derive2 { name="hsrecombi"; version="0.3.4"; sha256="0ca6672px0y5cibv9hk4hc638rp4d3bhbw0qn81irwwk84yacspv"; depends=[curl data_table dplyr hsphase quadprog Rcpp rlist]; }; hsstan = derive2 { name="hsstan"; version="0.8"; sha256="1milwygwn3djd5rv7x03wp6l02gdvaxnm4zhm56fwm64jbk5z3yg"; depends=[BH ggplot2 loo pROC Rcpp RcppEigen rstan rstantools StanHeaders]; }; htdp = derive2 { name="htdp"; version="0.1.4"; sha256="0w579qp0p544xryb5r08m1nhqf7rmgv9q0lyx6my4av62l70ka5w"; depends=[Rcpp]; }; htestClust = derive2 { name="htestClust"; version="0.2.0"; sha256="1nwj74w5hyz929jz2qci12x1zpk9gva75gn68k70l6xc5vya60qn"; depends=[bootstrap MASS]; }; htm2txt = derive2 { name="htm2txt"; version="2.1.1"; sha256="09q026yy8qm1fb3a4bf9vsp4j09kayl7xmk0p58ikar5l3bmfdjv"; depends=[]; }; html2R = derive2 { name="html2R"; version="0.1.0"; sha256="1zdnwbqlpjh8r2xcl83da9pzh9cb8h908krnrs61vqhka7zb82ng"; depends=[glue shiny shinyAce shinyjqui shinythemes]; }; + html5 = derive2 { name="html5"; version="0.1.0"; sha256="0ainfi0gb3ylg10j910z61j6qppfl6jh8399ng9wlpv8c7pjzs8l"; depends=[]; }; htmlTable = derive2 { name="htmlTable"; version="2.1.0"; sha256="1gzh0bdxi55p1ckxv4k0a41b1j0grwv2w3lkqz4c3gkw66dk6ja0"; depends=[checkmate htmltools htmlwidgets knitr magrittr rstudioapi stringr]; }; - htmldf = derive2 { name="htmldf"; version="0.1.0"; sha256="0slsmb1cjbmn7m43xdvdjsvlr8qhqf5g72b5yml0yyh4hlw11cf1"; depends=[cld3 dplyr httr lubridate magrittr progress R_utils ranger rvest stringr tibble tidyr urltools xml2]; }; - htmltab = derive2 { name="htmltab"; version="0.7.1.1"; sha256="0nmb8zq6n13zj4rzgg74xpc6y8vkkwn8cqnyszq5h23gnn61inyl"; depends=[httr XML]; }; + htmldf = derive2 { name="htmldf"; version="0.2.0"; sha256="0wrc68dgws28ypgns6c542mf5ghnz297d07855wqz7p60hdk8m55"; depends=[cld3 dplyr httr lubridate magrittr progress R_utils ranger rvest stringr tibble tidyr urltools xml2]; }; + htmltab = derive2 { name="htmltab"; version="0.8.1"; sha256="07hvsxgjbic835jp8ilz3aw9hwlc66byii8mrm4qqpqmfc4splzb"; depends=[httr XML]; }; htmltidy = derive2 { name="htmltidy"; version="0.5.0"; sha256="1djkjff3750fm1sp54kf9cjvsqz2x7ia1ns12h5vqqcvwzfd0701"; depends=[htmltools htmlwidgets Rcpp XML xml2]; }; - htmltools = derive2 { name="htmltools"; version="0.5.0"; sha256="07fjznax5sin563ddnzlb7iwc8b39wzf7ymjn66pbmxgskijq2pz"; depends=[base64enc digest rlang]; }; + htmltools = derive2 { name="htmltools"; version="0.5.1.1"; sha256="1fm4cymz4hz6lds80m9j5q00xy5flkrmfn5dkrn3s3rkzqpyggzh"; depends=[base64enc digest rlang]; }; htmlwidgets = derive2 { name="htmlwidgets"; version="1.5.3"; sha256="0a8g7wqd3qxnhwkm9c9bkzg29db7gvjiaa5y038ln8nch8qq7981"; depends=[htmltools jsonlite yaml]; }; htree = derive2 { name="htree"; version="2.0.0"; sha256="15bi5c2p4aghihp3k12s78447j2x9hbsaq56b5lc8jmd1vf0jdwb"; depends=[]; }; hts = derive2 { name="hts"; version="6.0.1"; sha256="0bbg7p9iqi3azl7m2vh9ggfdi90c9hy31fm5p0w9ixmvvavwhny6"; depends=[forecast Matrix matrixcalc Rcpp RcppEigen SparseM]; }; htsr = derive2 { name="htsr"; version="1.1.0"; sha256="0dndsdd8k5jfqgq1h9s58iw7ddqw09g9liyc06ahgykx8pfj9lcy"; depends=[DBI directlabels dplyr editData ggplot2 lubridate openair purrr raster RColorBrewer readr readxl RODBC RSQLite shiny stringr tibble WriteXLS zoo]; }; - httk = derive2 { name="httk"; version="2.0.3"; sha256="1lkwlxrq9gj3m65il2jib3sh4dvl2xf276h9j6nlyg69mpz8i591"; depends=[data_table deSolve magrittr msm mvtnorm purrr survey truncnorm]; }; httpRequest = derive2 { name="httpRequest"; version="0.0.10"; sha256="0f6mksy38p9nklsr44ki7a79df1f28jwn2jfyb6f9kbjzh98746j"; depends=[]; }; - httpcache = derive2 { name="httpcache"; version="1.1.0"; sha256="11hdc1jj2jbgvsps1h55azq0cr2fl556k631ns9k0747sjfmy2k9"; depends=[digest httr]; }; + httpcache = derive2 { name="httpcache"; version="1.2.0"; sha256="026sl19301al3sid9hlwq8jz5b0zvh9a4n3cl4niqvc2b57h133r"; depends=[digest httr]; }; httpcode = derive2 { name="httpcode"; version="0.3.0"; sha256="0xig0rvc81hg7mw0iq9s0an1nw24fg0kfs2p2n6dzhwl9w506fjr"; depends=[]; }; + httpgd = derive2 { name="httpgd"; version="1.1.1"; sha256="1mrnfh0f1crvk2pc1ihmykf75bibflmpjap6m3hc5iizn5w0qa3c"; depends=[BH cpp11 later systemfonts]; }; httping = derive2 { name="httping"; version="0.2.0"; sha256="0hdcf51yak8yagy4xj9cyck934lgmvpkd08jvlql33ir5mqvvv3i"; depends=[httpcode httr jsonlite magrittr pryr]; }; - httptest = derive2 { name="httptest"; version="3.3.0"; sha256="1xcq0siyjb17yggaycxgp3byi276vwfa71450zbbzcb8617wsapd"; depends=[curl digest httr jsonlite testthat]; }; - httpuv = derive2 { name="httpuv"; version="1.5.4"; sha256="066rprqvz9qln6xd85x1yh1wbbmzd157xjl8zq1zbgr8l6347inm"; depends=[BH later promises R6 Rcpp]; }; + httpproblems = derive2 { name="httpproblems"; version="1.0.0"; sha256="0dwxi3867hxafsr98vyqhn9aqmr2pl8qlqmwxdcmlmgdwwlhmrnb"; depends=[]; }; + httptest = derive2 { name="httptest"; version="4.0.0"; sha256="13mc75rrn3mhsa7h7sxicgkk36fjc341dwzif2jhpab3na6465hj"; depends=[curl digest httr jsonlite testthat]; }; + httpuv = derive2 { name="httpuv"; version="1.6.0"; sha256="01i0x9234fsyinzfjyl9a807kyvb0nivr6jx9911fp0msdmy1vkm"; depends=[later promises R6 Rcpp]; }; httr = derive2 { name="httr"; version="1.4.2"; sha256="1y8y1g1dkgv9jafrk1kj6pzxpw95c0rr9lplblfq2byrs1pfsas6"; depends=[curl jsonlite mime openssl R6]; }; hues = derive2 { name="hues"; version="0.2.0"; sha256="062i7yc16nmnp15c1jh4xffw2lpklp36wkn1yvagh186ahnlgffx"; depends=[colorspace]; }; huge = derive2 { name="huge"; version="1.3.4.1"; sha256="11m80dnaxqw5v006q6kvhndl2y5ih5553fcqg4jcaljd8sp9xvvq"; depends=[igraph MASS Matrix Rcpp RcppEigen]; }; humanFormat = derive2 { name="humanFormat"; version="1.0"; sha256="0zwjbl8s5dx5d57sfmq6myc6snximc56zl88h8y1s1jqphyn9sir"; depends=[testthat]; }; humaniformat = derive2 { name="humaniformat"; version="0.6.0"; sha256="0vaynjzz57pk4y1liag9lpn9jkag2033a6bkn28zzm7ndg3344l6"; depends=[Rcpp]; }; humanize = derive2 { name="humanize"; version="0.2.0"; sha256="0hhhd640n77s8xaa2gbd9fckdk2yjg68gdb7wjy56a2khzqfssxr"; depends=[assertthat glue lubridate]; }; - humanleague = derive2 { name="humanleague"; version="2.1.2"; sha256="181gz1plz9g8bbjaf67ndhfd2qz5ksnd2l212wm1a383ddc58pmr"; depends=[Rcpp]; }; + humanleague = derive2 { name="humanleague"; version="2.1.8"; sha256="148ipf1yhpz1n1nikbz1iz29qap28z7qz1apys3kyq9pjj30m7yl"; depends=[Rcpp]; }; humidity = derive2 { name="humidity"; version="0.1.5"; sha256="143pn8jjinlda76b94qh5zw2sfajw0ifcx774x6adr2il5a5wm99"; depends=[]; }; hunspell = derive2 { name="hunspell"; version="3.0.1"; sha256="0ql6y05d4xxpm468rslb0wxdp1x9l3flxzmb5w6pjg617f8vpv8z"; depends=[digest Rcpp]; }; hurdlr = derive2 { name="hurdlr"; version="0.1"; sha256="1ryrqsxa07isxv2zx156bcn36d4yjvwpirb8jqcmqm97q7rmihmq"; depends=[]; }; hurricaneexposure = derive2 { name="hurricaneexposure"; version="0.1.1"; sha256="0a8xy71dkq2bzdnc90irxmbcxhi0anh87ic22x7b22c3m5605w6s"; depends=[data_table dplyr ggmap ggplot2 lazyeval lubridate mapproj maps purrr RColorBrewer rlang stringr tidyr]; }; hutils = derive2 { name="hutils"; version="1.6.0"; sha256="17q9ndsb11k66y0c0sz0qq9nm9b4xl6ijjwlim7qbm6z69qv2krc"; depends=[data_table fastmatch magrittr]; }; hutilscpp = derive2 { name="hutilscpp"; version="0.5.2"; sha256="1d25csrn9mrnvzdjamn7zrmsz8mc3qp8841n7kjrifdav42s4y32"; depends=[data_table glue hutils magrittr Rcpp]; }; - huxtable = derive2 { name="huxtable"; version="5.1.1"; sha256="09wwmz0yhxdb8d2qd56i2bbwn8mpfsxb9hfad5gkp5n29kchass1"; depends=[assertthat commonmark generics glue memoise R6 rlang stringr tidyselect xml2]; }; + huxtable = derive2 { name="huxtable"; version="5.3.0"; sha256="1jar8z10jqzpcy7388vl0nmzb018r70x43smnk10wb6szhmbssw7"; depends=[assertthat commonmark generics glue memoise R6 rlang stringr tidyselect xml2]; }; hwde = derive2 { name="hwde"; version="0.67"; sha256="0wb2f9i5qi7w77ygh8bvydfpr7j5x8dyvnnhdkajaz0wdcpkyaqy"; depends=[]; }; hwordcloud = derive2 { name="hwordcloud"; version="0.1.0"; sha256="0civbwv276lcwvfs4qzz14r8rk14kg1ml4zzhi3msnkkh29v70y2"; depends=[colourpicker htmlwidgets shiny wordcloud2]; }; hwriter = derive2 { name="hwriter"; version="1.3.2"; sha256="0arjsz854rfkfqhgvpqbm9lfni97dcjs66isdsfvwfd2wz932dbb"; depends=[]; }; @@ -9691,19 +10079,18 @@ in with self; { hybridEnsemble = derive2 { name="hybridEnsemble"; version="1.0.0"; sha256="08y11cmlhnl456wxsvh3ll1f9ywkmgqjwlwr3v3qhm54nlanwvkr"; depends=[ada AUC e1071 FNN genalg GenSA glmnet kernelFactory NMOF nnet nnls pso quadprog randomForest reportr Rmalschains ROCR rotationForest rpart soma tabuSearch]; }; hybridModels = derive2 { name="hybridModels"; version="0.3.7"; sha256="0fj3dvv7s1hlicvlb077pkhbj894brzgdxhp67jck9zpy2qymzxq"; depends=[doParallel doRNG foreach ggplot2 GillespieSSA reshape2 stringr]; }; hydra = derive2 { name="hydra"; version="0.1.0"; sha256="0r3r8cds4h15narawxhzkrvgnf00vlgrgqdgnmbzjyyb1dmry8wn"; depends=[]; }; - hydraulics = derive2 { name="hydraulics"; version="0.2.3"; sha256="1ci81831ypbax7n661s3w2ad89ijv816khkg9kxlidyynhrg78fl"; depends=[ggplot2 reshape2 units]; }; + hydraulics = derive2 { name="hydraulics"; version="0.2.4"; sha256="0lfc3xavbcmqh7ran60hi9lkv1fyw6adn63dbdik5x5dmk729vl8"; depends=[ggplot2 reshape2 units]; }; hydroApps = derive2 { name="hydroApps"; version="0.1-1"; sha256="1ycv7l2ywwnx2mgklg6rry7n24jyhi4spvp1xl345yvyn9kf15dz"; depends=[nsRFA]; }; hydroGOF = derive2 { name="hydroGOF"; version="0.4-0"; sha256="0fw8b66k7gdkdjxgmdpp3lk9d8p0wmlvhq2rkcvajjb5wd09f43a"; depends=[hydroTSM xts zoo]; }; hydroPSO = derive2 { name="hydroPSO"; version="0.5-1"; sha256="16gdv19yqla80s9fjmvahfn21jv62zivirzs5ch4zm9db54g6bry"; depends=[data_table Hmisc hydroGOF hydroTSM lattice lhs scatterplot3d sp vioplot zoo]; }; hydroTSM = derive2 { name="hydroTSM"; version="0.6-0"; sha256="1msavd2k05apsky88zkk1l3c6y3v95fwhmr6xmwsap70bj25krsv"; depends=[automap e1071 gstat lattice maptools sp xts zoo]; }; hydroToolkit = derive2 { name="hydroToolkit"; version="0.1.0"; sha256="0bij4365hczvq17wj9hp0570v35m8ili11mp9dzfj3mvhhqrc9p4"; depends=[ggplot2 lubridate plotly readxl reshape2]; }; hydrogeo = derive2 { name="hydrogeo"; version="0.6-1"; sha256="16m6yvr9yhvb0vdh9pqd6gzf3h9km7gd89y6risjddv6g83469k8"; depends=[]; }; - hydrolinks = derive2 { name="hydrolinks"; version="0.10.0"; sha256="0004a03bx9l9wq6zdz5az41rjxv1ka4qmnxk6ksy8i7365wsay88"; depends=[dbplyr dplyr httr rappdirs RSQLite sf units]; }; - hydroscoper = derive2 { name="hydroscoper"; version="1.3"; sha256="03g841a1sbhp2kcdl39b9577lyd9i1241smn41578dcyrxshc2in"; depends=[jsonlite pingr readr stringi stringr tibble]; }; + hydroscoper = derive2 { name="hydroscoper"; version="1.4"; sha256="1ldbss5bnhhqlpkikk1i2vm0imiiqrn53xmfhd0sgx2ld7b54s1v"; depends=[jsonlite pingr readr stringi stringr tibble]; }; hydrostats = derive2 { name="hydrostats"; version="0.2.7"; sha256="16xrl94289kk1fb6pj0j8q8b40rmsm86fz2msmrmxh7mdp6hmxx9"; depends=[]; }; hyfo = derive2 { name="hyfo"; version="1.4.3"; sha256="012akh96qwafhgjba1gjwy0r14a6shcsk5b7n1hvw230s07zxd8r"; depends=[data_table ggplot2 lmom maps maptools MASS moments ncdf4 plyr reshape2 rgdal rgeos zoo]; }; hyper_fit = derive2 { name="hyper.fit"; version="1.1.1"; sha256="1xibiydfkhzsw0yqfc0xfzj4yz8xyxqlvnfpyxg33v5fwp9wap3v"; depends=[LaplacesDemon magicaxis MASS rgl]; }; - hyper2 = derive2 { name="hyper2"; version="1.0-7"; sha256="155ycb26mgk0ic899ji1pv1k2mmwfzwaa0zj38a9v6fwdgw87rpl"; depends=[cubature magrittr partitions Rcpp]; }; + hyper2 = derive2 { name="hyper2"; version="2.0-0"; sha256="03mgz3b9idwm7m4c2zzyqin8p85pp3yhmaxsxsbkx5li2p66fhwn"; depends=[cubature EMC magrittr mathjaxr partitions Rcpp]; }; hyperSMURF = derive2 { name="hyperSMURF"; version="2.0"; sha256="1aczsph6ax5xfd5rfvsd9bmgaq3j2f5f82fx8whrgbin0hxz19d8"; depends=[randomForest unbalanced]; }; hyperSpec = derive2 { name="hyperSpec"; version="0.99-20201127"; sha256="1mflkygqz2x63d7bwiyfkdc1bndz73bfzmbdjh2fg8x15kbpm2r6"; depends=[dplyr ggplot2 lattice latticeExtra lazyeval testthat xml2]; }; hypercube = derive2 { name="hypercube"; version="0.2.1"; sha256="0m0n64rl5fnhvhfdknrza8a0h5lw8vbgakaqbyfx77ixhwqhjn1l"; depends=[dplyr plotly stringr]; }; @@ -9718,17 +10105,18 @@ in with self; { hystReet = derive2 { name="hystReet"; version="0.0.2"; sha256="01nrbk48r1hf1yc953yf1pzryzrjjckwdqhb3pbnwfza8q0aqsfq"; depends=[httr jsonlite lubridate]; }; hysteresis = derive2 { name="hysteresis"; version="2.6"; sha256="00v19m52bg2i3zg8p7yj56axzj9sm64qr61226p5h7sn0zrpws3b"; depends=[car MASS msm]; }; hzar = derive2 { name="hzar"; version="0.2-5"; sha256="000l4ki3hvznnhkxc5j422h5ifnsfqalv666j48yby1hsf1lc3kg"; depends=[coda foreach MCMCpack]; }; - i2dash = derive2 { name="i2dash"; version="0.2.2"; sha256="16f9snbp3ann303x41yg52mfs9rgzsn5kibhddyxqh61g3l0w60n"; depends=[assertive_sets assertive_types flexdashboard glue knitr magrittr rmarkdown stringi stringr yaml ymlthis]; }; - i2extras = derive2 { name="i2extras"; version="0.0.2"; sha256="005ydg4p8sb7l2s2g520ky9n7pissai9isvxzbbiajqxajbk41h6"; depends=[dplyr ellipsis ggplot2 incidence2 MASS rlang tibble tidyr trending vctrs]; }; + i2dash = derive2 { name="i2dash"; version="0.2.3"; sha256="0pj4s47nbs67jnnk0dsna59lrn983zzkybbf6hf4s77sikshmwf0"; depends=[assertive_sets assertive_types flexdashboard glue htmltools knitr magrittr rmarkdown stringi stringr xfun ymlthis]; }; + i2extras = derive2 { name="i2extras"; version="0.1.0"; sha256="0n3s3iwc7rgnwx3ajki3kdcgq97xyx5q6fkvvhzy37z5nhnpb1a0"; depends=[data_table dplyr ellipsis ggplot2 incidence2 rlang tibble tidyr tidyselect trending vctrs]; }; + iAR = derive2 { name="iAR"; version="0.1.0"; sha256="1ry81qapffry81531l51mbmarvbx6d349s0w49lqlz0vh31hicgw"; depends=[ggplot2 Rdpack]; }; iAdapt = derive2 { name="iAdapt"; version="2.0.0"; sha256="1c49dc6hny034fgkdpvry99mz4z2n2daih32sh5jmk2xpqk1zzmw"; depends=[Matrix shiny shinydashboard]; }; iBATCGH = derive2 { name="iBATCGH"; version="1.3.1"; sha256="0xq4q4kc2f0whrxz1vmi2gca9pxqix2qm4sfkwbch85if2k8l8fj"; depends=[msm Rcpp RcppArmadillo]; }; iBST = derive2 { name="iBST"; version="1.0"; sha256="02p7lcr1wrf21v4568jc8hmjcijy3fnbv77s8nlhv2s4p0pgzh5x"; depends=[Rcpp rpart survival]; }; iBreakDown = derive2 { name="iBreakDown"; version="1.3.1"; sha256="1bfl5bh0x6z5a0cmdmx68sap9zdxa3kwdnyk57csxapc362yz108"; depends=[ggplot2]; }; iC10 = derive2 { name="iC10"; version="1.5"; sha256="1xq6xv582wxdb0nc2nia3q38155gx8z26idiqyx7h1rjb20hhwdl"; depends=[iC10TrainingData impute pamr]; }; iC10TrainingData = derive2 { name="iC10TrainingData"; version="1.3.1"; sha256="175ymib3h359296hk36psryksisipx63ybvacz8hys21irzx58j1"; depends=[]; }; - iCAMP = derive2 { name="iCAMP"; version="1.2.9"; sha256="05j8n5bl8gzb978m5l930k12sh4fwnskbk6y4hhnl0j528l7ilb7"; depends=[ape bigmemory Hmisc minpack_lm nortest permute vegan]; }; + iCAMP = derive2 { name="iCAMP"; version="1.3.4"; sha256="0hzl18irvndnka8vkza0f9sspfj4708dmzsdvbnv7mz4s41vqn11"; depends=[ape bigmemory Hmisc minpack_lm nortest permute vegan]; }; iCARH = derive2 { name="iCARH"; version="2.0.2.1"; sha256="1x703ydssmgb7j0hgqn3d5sh9457jgj7s2m8i12x2b9wvkh0fz8j"; depends=[abind ggplot2 glue igraph KEGGgraph MASS Matrix mc2d RCurl reshape2 rstan]; }; - iCellR = derive2 { name="iCellR"; version="1.5.8"; sha256="0nsb4yhgva779gs1ifavxcp3jy400y0q9nsh07hw5ppirfbnvrk0"; depends=[ape data_table ggdendro ggplot2 ggpubr ggrepel gridExtra hdf5r Hmisc htmlwidgets igraph knitr Matrix NbClust pheatmap plotly plyr progress RANN RColorBrewer Rcpp reshape Rtsne scatterplot3d shiny uwot]; }; + iCellR = derive2 { name="iCellR"; version="1.6.4"; sha256="0l9ncsgndbrq803gi1pd9va5sax04fpbncqh2948584gx7xna773"; depends=[ape data_table ggdendro ggplot2 ggpubr ggrepel gridExtra hdf5r Hmisc htmlwidgets igraph jsonlite knitr Matrix NbClust pheatmap plotly plyr png progress RANN RColorBrewer Rcpp reshape Rtsne scatterplot3d shiny uwot]; }; iCiteR = derive2 { name="iCiteR"; version="0.2.1"; sha256="0hbps2q5i7yj6zvqawlayhqqr5iv39yqc0xnk7fvra7rimzc1qid"; depends=[httr]; }; iClick = derive2 { name="iClick"; version="1.5"; sha256="0yq0r9nz1mf9ci6l30ylqxbgl8mf1ahyqzr7m6nks0ygxabipdnd"; depends=[boot car coefplot fBasics forecast lattice lmtest lubridate openair papeR rugarch sandwich timeDate timeSeries xts zoo]; }; iCluster = derive2 { name="iCluster"; version="2.1.0"; sha256="09j36xv87d382m5ijkhmp2mxaajc4k97cf9k1hb11ksk7fxdqz6r"; depends=[caTools gdata gplots gtools lattice]; }; @@ -9736,39 +10124,42 @@ in with self; { iDOS = derive2 { name="iDOS"; version="1.0.0"; sha256="1jj98ikzvfp6qbnh2j6msi0m89sbmjjafgry43rq7qmczzs81hl8"; depends=[VennDiagram]; }; iDynoR = derive2 { name="iDynoR"; version="1.0"; sha256="01702vl10191mbq2wby1m0y6h8i6y6ic4pa83d27cg3yccsrhziz"; depends=[vegan XML]; }; iFad = derive2 { name="iFad"; version="3.0"; sha256="0jrl9bayihp3wb4k5w9kc71qlsdxk7vl83ydfibx2bg79c4hf3cs"; depends=[coda MASS Rlab ROCR]; }; - iForecast = derive2 { name="iForecast"; version="1.0.1"; sha256="0fqa2sb8kna16vwb73va00q3rzd5s3gd2h862wqpi24wj1d50dww"; depends=[caret magrittr zoo]; }; + iForecast = derive2 { name="iForecast"; version="1.0.2"; sha256="1rnqi16flm6c5ibsgydz3zqb1738fw2f6wbf5a5ymgf3dsarr2v4"; depends=[caret magrittr zoo]; }; iGSEA = derive2 { name="iGSEA"; version="1.2"; sha256="1xlz8mbxqnrwyqj7jwma7vmvjlaccajbfxf3hi4wp5qs2pch8806"; depends=[]; }; iGasso = derive2 { name="iGasso"; version="1.4"; sha256="17xxqncl5xcphdqclghcazygcgibf8ijdf4kkl3ga11xf70sahj2"; depends=[CompQuadForm lattice]; }; - iIneq = derive2 { name="iIneq"; version="1.0.1"; sha256="1mcr084ik1dc5fndj6ci7px4l1y8jz9kr59riqkf0bm6hras5rfg"; depends=[doParallel foreach]; }; + iGraphMatch = derive2 { name="iGraphMatch"; version="1.0.1"; sha256="0jpwml540k5wwn958vb6ni3pldpx675y9jm8pr6vp2s571mlz7cv"; depends=[clue igraph irlba Matrix Rcpp]; }; + iIneq = derive2 { name="iIneq"; version="1.0.2"; sha256="15487majkslabw33dgqfx0jmbzzjhiy8z07bki5540d1wf6rmmnn"; depends=[doParallel foreach]; }; iMRMC = derive2 { name="iMRMC"; version="1.2.2"; sha256="12ljry3gqzqjk72ndc557pn6jz3c23y5hcjlphw4kggrz7wb7b91"; depends=[]; }; iMediate = derive2 { name="iMediate"; version="0.5.5"; sha256="1lwhrzm4g2fcazh782g7p11v5pyx165ig1dzgkmdmjffpwk0w8b4"; depends=[MBESS mvtnorm plotly]; }; iNEXT = derive2 { name="iNEXT"; version="2.0.20"; sha256="14bagsb0ja3j53i0g4a2ax2gj7lyc6sjcc7isdjx94clbnc2zcsg"; depends=[ggplot2 reshape2]; }; iNZightMR = derive2 { name="iNZightMR"; version="2.2.5"; sha256="1zxvlz0wyf4n2kpyk82grlww71agvfqp3apswbrimpvi13c9nzhl"; depends=[]; }; - iNZightPlots = derive2 { name="iNZightPlots"; version="2.12.4"; sha256="1zrx961danqhymk81mlfj29hd26iq5224k8zyjg6scgj71z1vjaz"; depends=[boot chron colorspace dichromat hexbin iNZightMR iNZightTools lubridate magrittr quantreg rlang s20x scales survey]; }; + iNZightPlots = derive2 { name="iNZightPlots"; version="2.12.6"; sha256="1qfs5h17p0zmzaj67dx197lqxyi670wfin5vm31v13jabwwsazgy"; depends=[boot chron colorspace dichromat hexbin iNZightMR iNZightTools lubridate magrittr quantreg rlang s20x scales survey]; }; iNZightRegression = derive2 { name="iNZightRegression"; version="1.3.0"; sha256="0q4w935ckqciw46vvqqwn50bq30qgzq8g4pag8zf00vs4v4rzmxm"; depends=[car dplyr ggplot2 ggrepel ggtext iNZightPlots iNZightTools magrittr multcomp patchwork]; }; iNZightTS = derive2 { name="iNZightTS"; version="1.5.7"; sha256="0x11ar2smm3am55k0pzxdx8q64l7vfbm6bbp4zs9q64q7069yrr1"; depends=[colorspace dplyr egg forcats ggplot2 ggtext glue gridExtra magrittr patchwork rlang tidyr]; }; - iNZightTools = derive2 { name="iNZightTools"; version="1.10"; sha256="1383004794jk4kvzz7k3c0ndz8fjf6chhck4ha2cadr8hqay80if"; depends=[chron dplyr forcats glue haven lubridate magrittr RcppTOML readr readxl stringr survey tibble tidyr validate zoo]; }; + iNZightTools = derive2 { name="iNZightTools"; version="1.11.0"; sha256="01aa623brgdip2gp4kga9c9mg7qfyn1mvhs9g6c75xv9c1xg8jcg"; depends=[chron dplyr forcats glue haven lubridate magrittr RcppTOML readr readxl srvyr stringr styler survey tibble tidyr validate zoo]; }; iRF = derive2 { name="iRF"; version="2.0.0"; sha256="1ll4lxg743p2zipxcq13yjsc7j7dk766dcyixwxilllbisg0dh8y"; depends=[AUC data_table doParallel dplyr foreach Matrix RColorBrewer Rcpp]; }; iRafNet = derive2 { name="iRafNet"; version="1.1-1"; sha256="0w9bry49apkrrrabglnv5w9l47jakmc30jh8q22a8gazwss293fb"; depends=[ROCR]; }; iRegression = derive2 { name="iRegression"; version="1.2.1"; sha256="1kwsrmsflmqan96aj0dczlszfww1dlg6rwycyid52f7ghg9810rn"; depends=[mgcv]; }; iRepro = derive2 { name="iRepro"; version="1.1"; sha256="1sqg1n83m1308v6bk8ilra8w01frqyd8vpvmv63rllxz38r3vyhz"; depends=[]; }; iSDM = derive2 { name="iSDM"; version="1.0"; sha256="1hzs187mwv3k2wx6dpvkizjhkcx63mznd06wiw6047lf5jrlif0a"; depends=[ade4 colorRamps geometry geosphere maptools MASS pdist raster rgdal rgl sp virtualspecies]; }; iSTATS = derive2 { name="iSTATS"; version="1.5"; sha256="14pd3k8w8hh7gl2iskax2pck6z96hdfrws5l69zdw02867bny404"; depends=[Cairo data_table ggplot2 gtools plotly rstudioapi shiny shinyBS shinyWidgets]; }; + iSubGen = derive2 { name="iSubGen"; version="1.0.1"; sha256="0kfrgh4399x71mwa5j36nfszd65ybp61fwpc7qj3j9ypmgidwbaj"; depends=[cluster ConsensusClusterPlus keras philentropy tensorflow]; }; iTOP = derive2 { name="iTOP"; version="1.0.2"; sha256="1n6nlmmx2h63nksycgzr7qsnd1j6bxa629av7cfd3ihriim7dj47"; depends=[corpcor Matrix]; }; iWISA = derive2 { name="iWISA"; version="1.0-2"; sha256="0jqi1kh7jlc04nb9d1w711q4i8j1vgwbxjls09z7853kv22wxfyz"; depends=[fda ggplot2 waveslim]; }; iWeigReg = derive2 { name="iWeigReg"; version="1.0"; sha256="09ajbqllr4ajmpk8qs6qw019fx8a7vsabm37867zycssn77z9nc8"; depends=[MASS trust]; }; iZID = derive2 { name="iZID"; version="0.0.1"; sha256="1jaqdh6i5xyfw4y2wd9qivzjklf4j2xxnya8ssn7rv5bz6misgcz"; depends=[doParallel extraDistr foreach rootSolve]; }; iadf = derive2 { name="iadf"; version="0.1.1"; sha256="0ys8rd05s0j6cs7snmp1car7lp7k4awvs8gnlqaw9zcd7w7k9r06"; depends=[dplR dplyr manipulate rlang tibble tidyr tidyselect]; }; - iai = derive2 { name="iai"; version="1.4.0"; sha256="0a4dvx440glynl74xiviq8frb6khr1fp9xcb1ckf0dx5p16vbpsp"; depends=[JuliaCall lifecycle rlang stringr]; }; + iai = derive2 { name="iai"; version="1.5.0"; sha256="17m5pvp352klv5kip8gk1f5flanlvxlpi7hrn4kcrhzb1gd3amsb"; depends=[JuliaCall lifecycle rappdirs rlang stringr]; }; ialiquor = derive2 { name="ialiquor"; version="0.1.0"; sha256="0nrp75lzb49lhkxspvaq6wx5c48ny6fq9m3r1bz0v5f2fd5ilrdx"; depends=[]; }; iarm = derive2 { name="iarm"; version="0.4.2"; sha256="0scf1ad87sn4s7ki6hpgk4isy1k3qkdvs18bkwdflsarcx437ms2"; depends=[eRm ggplot2 gridExtra Hmisc PP psychotools vcdExtra]; }; ib = derive2 { name="ib"; version="0.1.0"; sha256="1rzgpgmg7bzg60dyxmmprcsri5wdbarqgp4ya5h418hnnmh8hg0n"; depends=[lme4 MASS Matrix Rdpack VGAM]; }; - ibb = derive2 { name="ibb"; version="0.0.1"; sha256="0k2k2qsf11jcn12qm6823hv5ilnf70r0mdskgzjww4mi66kr5lzx"; depends=[dplyr httr jsonlite xml2]; }; + ibawds = derive2 { name="ibawds"; version="0.1.2"; sha256="1pddzdgm5701rwvd628gcm0yn0qg0p9zhahjkcjwcdidkdh73xa3"; depends=[dslabs ggplot2 magrittr stringr]; }; + ibb = derive2 { name="ibb"; version="0.0.2"; sha256="11rfrf0ap97rsq0yy23sjahp1bin3j31zdd61p8b5mbp0s0k7ci4"; depends=[dplyr httr jsonlite magrittr rlang tibble tidyselect]; }; ibd = derive2 { name="ibd"; version="1.5"; sha256="0rxvy4hn4fpbv6y214ggkmgfvzwns5mkanp4h8201rjk3v84mk2r"; depends=[car emmeans lpSolve multcomp]; }; ibdreg = derive2 { name="ibdreg"; version="0.3.1"; sha256="0kgx9iavgm6d6njhki7bm82d6lw2c7kcch2pryd339js2hm0l5gq"; depends=[]; }; ibdsim2 = derive2 { name="ibdsim2"; version="1.3.0"; sha256="00i2aakrs5rjp1vjlrg9khjfj9haw07v4yi54m49nkmvnjfyfixg"; depends=[ggplot2 glue pedtools Rcpp ribd]; }; ibeemd = derive2 { name="ibeemd"; version="1.0.1"; sha256="115z13q02gzixziknix2l53mi12zzg30ra9h35pv6qzrr11ra1ic"; depends=[deldir fields rgeos sp spdep]; }; - ibelief = derive2 { name="ibelief"; version="1.3"; sha256="15jafk5b954hsl5kkbiyr8pi385c92il05jls33lyf4i25q5aqk3"; depends=[]; }; + ibelief = derive2 { name="ibelief"; version="1.3.1"; sha256="0fl2vvyl2qygppcycbnjkmlvq6rmxq18y1hk512d6szgi0czvpls"; depends=[]; }; ibm = derive2 { name="ibm"; version="0.1.0"; sha256="0g6wg2qpa4q142xw2vq5pca4ll6pb8hyll5g0c93kk8crddk51s7"; depends=[Rcpp]; }; ibmAcousticR = derive2 { name="ibmAcousticR"; version="0.2.1"; sha256="1hrd2273n9fgi3hgjissjn4syw914mxm4wr98ij819yahsi9aj42"; depends=[httr jsonlite XML]; }; ibmcraftr = derive2 { name="ibmcraftr"; version="1.0.0"; sha256="0zm5j0a1wjj5agibp38h73qxpq0njvrhfq3077xhhfizcb3v24sb"; depends=[Rcpp]; }; @@ -9784,32 +10175,35 @@ in with self; { icapca = derive2 { name="icapca"; version="1.1"; sha256="131gdrk8vsbac0krmsryvsp21bn9hzxqxq847zn16cxjf6y5i3xb"; depends=[]; }; icarus = derive2 { name="icarus"; version="0.3.1"; sha256="0ipbhzvwdn1cnzgdw33cwv901768srxfi588bimjx2ssl80mqn3a"; depends=[]; }; iccbeta = derive2 { name="iccbeta"; version="1.2.0"; sha256="03ms1c8qpbgxabj3hh4n0gwcazw6cd0cvixck5rz8fkvj04xzjak"; depends=[lme4 Rcpp RcppArmadillo]; }; - iccde = derive2 { name="iccde"; version="0.2.0"; sha256="13b5hq7h1x87g4dwk50xczyiwrdk3ksr51cll9a2j2ak1cyaf3g4"; depends=[]; }; + iccde = derive2 { name="iccde"; version="0.3.2"; sha256="0r7g2ydj3yigm2n3qprj65ydrk0lacba7qnig6l6s14zi4bg9xna"; depends=[]; }; icd_data = derive2 { name="icd.data"; version="1.0"; sha256="0cynr9327wfg88661w4hali48mb6ghyvlqgybsa38k9bbf57v8aa"; depends=[]; }; icdGLM = derive2 { name="icdGLM"; version="1.0.0"; sha256="1mh9kwn21n19v4lrmj33ghpna7dl66fx19gi6lcjanmrpzrkwdnz"; depends=[Matrix]; }; - icemelt = derive2 { name="icemelt"; version="1.0"; sha256="13pjbyh2ggns36m8s43m2cb0kvisjlfxq75gqscldp75zjli2wi8"; depends=[survival]; }; + icdpicr = derive2 { name="icdpicr"; version="1.0.0"; sha256="0vfiw4f3mdh84b485hqvhjxx1bq15ankpzs2gwa3s93q1ykb8c3j"; depends=[stringr]; }; icenReg = derive2 { name="icenReg"; version="2.0.15"; sha256="1cjlvj4i5bir5769a22w8bb9477h04d8rpxk9ks72jp6zjjkq5qa"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; }; icensBKL = derive2 { name="icensBKL"; version="1.2"; sha256="1zzv80jnn8ilnc1gv4nj24l2fl8805rjhqjgkb0xx4y9zhpg1jkp"; depends=[gtools Icens MASS mvtnorm smoothSurv survival TeachingDemos]; }; icensmis = derive2 { name="icensmis"; version="1.4.0"; sha256="1rfsciac7lj6649a0lrmipjnhdlz615bd9hsvcy8mis0yv8k5y93"; depends=[Rcpp]; }; icesAdvice = derive2 { name="icesAdvice"; version="2.0-0"; sha256="0sx93fsx2srmynnvs3bjb525m9a5w70qr9lghmkqa07crd991vfr"; depends=[]; }; icesDatras = derive2 { name="icesDatras"; version="1.3-0"; sha256="0yaqlximxa3rcjxgrd0mii02mm9gpcxgw3i8pymp00bk8zixvj30"; depends=[]; }; icesTAF = derive2 { name="icesTAF"; version="3.6.0"; sha256="1g2qlpbi94731vvzdnc16f1gpgn49sxzlsljzzapfgk14dcm96b1"; depends=[glue jsonlite lattice purrr roxygen2]; }; + icesVocab = derive2 { name="icesVocab"; version="1.1.9"; sha256="14zbc31xb7lizz1ki85nxb6lzmwjdyfajv0j43hmbbh3yscjd9p3"; depends=[xml2]; }; icmm = derive2 { name="icmm"; version="1.1"; sha256="1w9f1rniz67rrvq0akc64s5433ddmr2cgbcljil4c58yyz8hinx8"; depends=[EbayesThresh]; }; - icosa = derive2 { name="icosa"; version="0.10.0"; sha256="1vd1qn1070rml7mygj9k13b96zrc77bw90g8f44s7wmhabn6214q"; depends=[igraph Rcpp sp]; }; + iconr = derive2 { name="iconr"; version="0.1.0"; sha256="17q7zj92yrj49slmrpwkxkjd0imrl9ildms9zj8qx7yc7dcv4c1s"; depends=[igraph magick rgdal]; }; + icosa = derive2 { name="icosa"; version="0.10.1"; sha256="025bqlgx4p1kxpmizfzgiamcq2f5nj5m2ky25fpgdm714sybvwvi"; depends=[igraph Rcpp sp]; }; icpsrdata = derive2 { name="icpsrdata"; version="0.5.0"; sha256="024lda7619j8nxcj0d0myaqjsmyl9mqdyghd6imr29jxa2qhcm8y"; depends=[httr purrr rvest]; }; icr = derive2 { name="icr"; version="0.6.2"; sha256="1xqvzn02x13d706irv83zycpxhm8yq1c34rh1nphddy5gri7gwjb"; depends=[Rcpp]; }; icrf = derive2 { name="icrf"; version="1.0.0"; sha256="1qz4wv23hspbrfzrj80qmhi0759zh3gn23rnns18j3020f506jdd"; depends=[Icens]; }; icsw = derive2 { name="icsw"; version="1.0.0"; sha256="0g7bcqs0rpbs1p202i9wjbl8hhy3r196zambm044xyf7kvsbzzf6"; depends=[]; }; - idar = derive2 { name="idar"; version="1.1"; sha256="0nac7sav4rrp6a94aqgp8qyb22wg7y7gc5n1dhid894yc9z47a5f"; depends=[ape FD picante spatstat]; }; + idar = derive2 { name="idar"; version="1.2"; sha256="0bsh0dx44fi2ggf33xin94fh2yjkr0bbib68cy7k5c9z363zwhfc"; depends=[ape FD picante spatstat spatstat_core spatstat_geom]; }; idbg = derive2 { name="idbg"; version="1.0"; sha256="1rxmj04hswxybrg7dfib3mjy8v8mdiv13zwbscp2q55z55hhf1m5"; depends=[]; }; - idbr = derive2 { name="idbr"; version="0.3"; sha256="02syk7fmif0xnddl8189vnl329r8mwl3iwv2rsf6cw7mwg30fhyw"; depends=[countrycode dplyr httr jsonlite]; }; + idbr = derive2 { name="idbr"; version="1.0"; sha256="0silsd3ydrrg924klga8dascxjfmi2czw7sz3ap2j7gkgvxcfcpv"; depends=[countrycode dplyr httr jsonlite purrr rnaturalearthdata sf]; }; ideamdb = derive2 { name="ideamdb"; version="0.0.9"; sha256="1f4dcv6c8ny7pik547f4840vhll26mzfcijnfsiqx31xhn0gsizd"; depends=[dplyr ggplot2 stringr tidyr]; }; idefix = derive2 { name="idefix"; version="1.0.1"; sha256="1hqq9w0hssczmy8kvpp438fz0r5wdrxzxpkhrljz50rqazr61asy"; depends=[dplyr MASS mlogit Rcpp RcppArmadillo Rdpack scales shiny tmvtnorm]; }; + idem = derive2 { name="idem"; version="5.1"; sha256="1i5h0hg76rrxharlfv33kcbwmvkfyfk92wim93dvpkflnbwsmzfl"; depends=[BH mice Rcpp RcppEigen rstan sqldf StanHeaders survival]; }; idendr0 = derive2 { name="idendr0"; version="1.5.3"; sha256="11c12d166bp2i498d8y6ipg5jhz1xsdsrmnhjqnrqqzp9avvrsjp"; depends=[tkrplot]; }; identity = derive2 { name="identity"; version="0.2-1"; sha256="1j5wb5cj5j49in2g6r1shdm4ri4cfzj22hpqazvcmq4dm291sdi9"; depends=[]; }; ideq = derive2 { name="ideq"; version="0.1.4"; sha256="06xk9ghvh3fb79lbkmbqsk07xj06qaigiw41rzbi3bji3fjq1prw"; depends=[matrixcalc mvtnorm pdist Rcpp RcppArmadillo rgen]; }; ider = derive2 { name="ider"; version="0.1.0"; sha256="021s4fybki7a6mdsr6gkjrzfhaqdcg0m2a6r24y91jklxlxqxmws"; depends=[FNN]; }; - idiogramFISH = derive2 { name="idiogramFISH"; version="1.16.8"; sha256="1mla0djkzqx1r2587niy800ar96qx14d8fxi6q156jr7049whn0w"; depends=[crayon dplyr tidyr]; }; + idiogramFISH = derive2 { name="idiogramFISH"; version="2.0.4"; sha256="1ydm5cm99f6ymg78lmi56d8va6i5szmhczfj773aiwlxi3624n3z"; depends=[crayon dplyr plyr tidyr]; }; idm = derive2 { name="idm"; version="1.8.2"; sha256="04f0i0kwdxywmj2i184knx5a5v9svx0lbam6wpz49hghg7qpy0w5"; depends=[animation ca corpcor dummies ggplot2 ggrepel]; }; idmTPreg = derive2 { name="idmTPreg"; version="1.1"; sha256="1329sjb4dnw3yiyg16whbj4l2v0kg8phg1x4ysvyp2kqkmw14yq6"; depends=[doParallel foreach survival]; }; idmodelr = derive2 { name="idmodelr"; version="0.3.2"; sha256="02hvlmk38rs0iavwz0qa3ryvyw1ixhjf9bksmadlhxl5pd18016j"; depends=[deSolve dplyr furrr future ggplot2 magrittr purrr rlang stringr tibble tidyr viridis]; }; @@ -9828,7 +10222,8 @@ in with self; { ifultools = derive2 { name="ifultools"; version="2.0-22"; sha256="0f95vqc47dgssqngznk0rclr72ndbyxc7gdq2cmbksvq7qpn3gg1"; depends=[MASS splus2R]; }; ig_vancouver_2014_topcolour = derive2 { name="ig.vancouver.2014.topcolour"; version="0.1.2.0"; sha256="0yclvm6xppf4w1qf25nf82hg1pliah68z7h3f683svv0j62q748h"; depends=[]; }; igate = derive2 { name="igate"; version="0.3.3"; sha256="0b8dk976z0764cmxwcq6w2f3akv7iivivharinq029p90b600qza"; depends=[dplyr ggplot2 kableExtra knitr rmarkdown stringr xtable]; }; - iglu = derive2 { name="iglu"; version="2.0.1"; sha256="0vc1n3a00116dg4wnd38rnxragif98jvhj23192jxxmgnvcv43sg"; depends=[caTools dplyr ggplot2 lubridate magrittr scales shiny tibble tidyr]; }; + iglu = derive2 { name="iglu"; version="2.1.0"; sha256="1fzc1siafppgfhkfgpkb510w75sdas7395jiy76bwshwpbqlk8kx"; depends=[caTools dplyr ggplot2 gridExtra hms lubridate magrittr patchwork scales shiny tibble tidyr]; }; + igoR = derive2 { name="igoR"; version="0.1.1"; sha256="1wlwhclcyzzh8pnb512l3f95hbi3gzykz4p7ahrfsvrvhhd1904p"; depends=[]; }; igraph = derive2 { name="igraph"; version="1.2.6"; sha256="0vf7wrx77cdiav8724cw8gchrn0y9wvywphf5km4pa7xcqhsf3b4"; depends=[magrittr Matrix pkgconfig]; }; igraphdata = derive2 { name="igraphdata"; version="1.0.1"; sha256="19w5npa4b8c054v94xlr7nmhhg2fhq4m8jbds86skp8zvipl4rkl"; depends=[]; }; igraphinshiny = derive2 { name="igraphinshiny"; version="0.1"; sha256="1ww5s4jfihzcx4k35lbhzsf54z720xh7b2p5alzk843m6rx77986"; depends=[igraph shiny]; }; @@ -9836,8 +10231,9 @@ in with self; { iheatmapr = derive2 { name="iheatmapr"; version="0.5.1"; sha256="1pwkwh7ljlpr6zyz6j8knpz3iw60xzkw8amc98x4pc2mw148jvzx"; depends=[fastcluster ggdendro htmlwidgets jsonlite knitr magrittr RColorBrewer scales]; }; ihpdr = derive2 { name="ihpdr"; version="1.2.1"; sha256="1qa9ndb5aqbmlqbl0ivh10ddah2rbhsc6928dml20fjgz7lggdww"; depends=[curl dplyr httr lubridate magrittr purrr readxl rlang rvest tidyr xml2]; }; iilasso = derive2 { name="iilasso"; version="0.0.2"; sha256="043m1n5840459zsknkb54801apb0a2cqfprncmj2wp235rbqj832"; depends=[BH Matrix Rcpp]; }; - ijtiff = derive2 { name="ijtiff"; version="2.2.4"; sha256="1v0gv9z4rbyn80swmka0jdbyz26q0fbzwwfjghmcxm542ijcm98g"; depends=[checkmate cli dplyr fs magrittr purrr readr rlang strex stringr withr zeallot]; }; + ijtiff = derive2 { name="ijtiff"; version="2.2.6"; sha256="15jvkavpww7jgvx8rr8fj6ihy4zicaxwi7hm16aly5zs3r1qcr3r"; depends=[checkmate cli dplyr fs magrittr purrr readr rlang strex stringr withr zeallot]; }; ilc = derive2 { name="ilc"; version="1.0"; sha256="0hs0nxv7cd300mfxscgvcjag9f2igispcskfknb7sn7p8qvwr5ki"; depends=[date demography forecast rainbow survival]; }; + imabc = derive2 { name="imabc"; version="1.0.0"; sha256="1p420jlvqqcqdjqp7y4mcjkzimw3qiygph5yrvmm75znax3fkg4z"; depends=[data_table foreach lhs MASS truncnorm]; }; image_CannyEdges = derive2 { name="image.CannyEdges"; version="0.1.0"; sha256="0c8pvk91xyys6d2i03yy88kylb3jli5jkpq2s069n7p0yl3z7rr1"; depends=[Rcpp]; }; image_ContourDetector = derive2 { name="image.ContourDetector"; version="0.1.0"; sha256="1z3713paqw86yq45sq1b4gi3nq3y21wcg3pxh7vsciqs669lpv1q"; depends=[Rcpp sp]; }; image_CornerDetectionF9 = derive2 { name="image.CornerDetectionF9"; version="0.1.0"; sha256="04qy2yvgjmgb8r3piw6v5g97abljqv1nw7vn2wvn1npkq9lzj94x"; depends=[Rcpp]; }; @@ -9847,11 +10243,11 @@ in with self; { image_binarization = derive2 { name="image.binarization"; version="0.1.1"; sha256="1dajmffxali1kj54lfvapgb0vv5bbxxy7wxdsr4p5dv29gjwbl7i"; depends=[magick Rcpp]; }; image_dlib = derive2 { name="image.dlib"; version="0.1.0"; sha256="118zwalpxcnn2fgjv8xsp763yvbqcyv81p6fblxizlnimyrjva71"; depends=[Rcpp]; }; image_libfacedetection = derive2 { name="image.libfacedetection"; version="0.1"; sha256="0mr7zrqd73mhvs918615lwsf2bgg63x3wh16wdpwhb2zd7ybm87a"; depends=[Rcpp]; }; - image_textlinedetector = derive2 { name="image.textlinedetector"; version="0.1.2"; sha256="15w0mfr2qby6plpgwz7vhj7bn9szzcyp7cmfd7z60477yp8bx1ld"; depends=[magick Rcpp]; }; - imageData = derive2 { name="imageData"; version="0.1-60"; sha256="1ry4l45az9az8wk1k16jxbszxwh0m9s3g838w7dad0midr2hs8qr"; depends=[dae GGally ggplot2 Hmisc RColorBrewer readxl reshape]; }; + image_textlinedetector = derive2 { name="image.textlinedetector"; version="0.1.3"; sha256="0fgzdq0bv7bixv6gsxkcmc8sa0q0yj7ai9kjgir9l2pww98mia2x"; depends=[magick Rcpp]; }; + imageData = derive2 { name="imageData"; version="0.1-61"; sha256="0bavyd8njfjd0l8dcsm6gklgc81kykl275w2gpvb5cxrhb9yp32n"; depends=[dae GGally ggplot2 Hmisc RColorBrewer readxl reshape]; }; imagefluency = derive2 { name="imagefluency"; version="0.2.3"; sha256="0f4kizxc86q6pgx5dbp14y6866b1ldyf7zgpfikd2iqhvxbs7qwa"; depends=[magick OpenImageR pracma R_utils readbitmap]; }; imagefx = derive2 { name="imagefx"; version="0.4.1"; sha256="1mxd33y8zbq8kig6m6xihb5w8wrjppgmpyjspvaxjwk7si9a09k1"; depends=[moments signal]; }; - imager = derive2 { name="imager"; version="0.42.3"; sha256="1wxvbv803222gjrf1ys6a349xlnmmdw3kqgi93piq9gq7lahihvg"; depends=[downloader igraph jpeg magrittr png purrr Rcpp readbitmap stringr]; }; + imager = derive2 { name="imager"; version="0.42.8"; sha256="1kzl93l6k9i4528bbycbqxdn28mj7hnx0fbxisva859xl1wys5c5"; depends=[downloader igraph jpeg magrittr png purrr Rcpp readbitmap stringr]; }; imagerExtra = derive2 { name="imagerExtra"; version="1.3.2"; sha256="1f6mxfn7am4ph9acbbx53r4bk4vsm73p7arh8rvrsic9pgma3gqf"; depends=[fftwtools imager magrittr Rcpp]; }; imageviewer = derive2 { name="imageviewer"; version="0.1.0"; sha256="1rsrwy5v0gnsmbay1zqijhvll2l1bs844m52w65588j9nlx4fci9"; depends=[htmlwidgets]; }; imagine = derive2 { name="imagine"; version="1.5.3"; sha256="1ss0gm769s8cmma3hnah15vmc2c5wxn0l3s4vas7jbvkwi62am6h"; depends=[Rcpp]; }; @@ -9859,36 +10255,35 @@ in with self; { imbibe = derive2 { name="imbibe"; version="0.1.0"; sha256="0l7wn7vcbb466a4i3w302ficdy0jvy2jh5qizfn7ahpcs7lpx6hr"; depends=[magrittr Rcpp RNifti]; }; imdbapi = derive2 { name="imdbapi"; version="0.1.0"; sha256="11v7c0s7qqf02b186md5lhgkgmywkn8lmmanlz3gfcxca26g047y"; depends=[dplyr httr stringr]; }; imfr = derive2 { name="imfr"; version="0.1.9.1"; sha256="1l1lvzvz9hsqwk60k2w8ry8mvgzj7wrd6ycfhgwv39xid9vk70g7"; depends=[dplyr httr jsonlite]; }; - imgpalr = derive2 { name="imgpalr"; version="0.3.0"; sha256="1kb1ggrlkrh086nwq47sf2y20r7ydk4ww2j3gq0s4iz00aa34pxg"; depends=[downloader dplyr farver jpeg magrittr tibble]; }; - imgrec = derive2 { name="imgrec"; version="0.1.0"; sha256="1v4q2hxil7f0jnj4nql44d9dssh8kz1mnj8ah5slndnn1fbymy8f"; depends=[base64enc dplyr httr jsonlite knitr rlang]; }; + imgpalr = derive2 { name="imgpalr"; version="0.3.1"; sha256="0v9npy63mv9r9wnd8pcdw4rkr0bybhhmkj36sza7dah92i06il17"; depends=[downloader dplyr farver jpeg magrittr tibble]; }; + imgrec = derive2 { name="imgrec"; version="0.1.2"; sha256="1cvd649z6xf4kifkg39c8syhxrlxkxff3gy1aa1mi02irqnmkb8q"; depends=[base64enc dplyr httr jsonlite knitr rlang]; }; imguR = derive2 { name="imguR"; version="1.0.3"; sha256="14f7ghgc8rbrpqb21rinfbrj1wh80i6ii0awwi814152v5qzj4b3"; depends=[httr jpeg png]; }; iml = derive2 { name="iml"; version="0.10.1"; sha256="1wz6xqhvqkzj723nw7qrlwb1171wvvpxhv3pa8cq7vcbkiflq37r"; depends=[checkmate data_table Formula future future_apply ggplot2 keras Metrics prediction R6]; }; immcp = derive2 { name="immcp"; version="0.9.2"; sha256="07q5dhz12pvy631jxans6q62kzqx9pil3ra72pgqlcxpndvv6f4w"; depends=[Boruta clusterProfiler corrr ggplot2 GSEABase GSVA igraph limma magrittr Matrix pbapply proxyC reshape2 RobustRankAggreg visNetwork]; }; immer = derive2 { name="immer"; version="1.1-35"; sha256="1nmf9wxxyq3p8b5kikpsr8b0v4s84zjpahg1rxvcrhc8blg26hjq"; depends=[CDM coda MASS psychotools Rcpp RcppArmadillo sirt TAM]; }; - immunarch = derive2 { name="immunarch"; version="0.6.5"; sha256="0vy1m4333k4v24qgcb0ra154hf35mp1f8m10hqnmy2qk00ksd01c"; depends=[airr circlize data_table dbplyr dplyr dtplyr factoextra fpc ggalluvial ggplot2 ggpubr ggrepel ggseqlogo magrittr MASS patchwork pheatmap plyr Rcpp readr readxl reshape2 rlang Rtsne scales shiny shinythemes stringr tibble UpSetR]; }; immuneSIM = derive2 { name="immuneSIM"; version="0.8.7"; sha256="0brj12xnkzmn3n91vb39fq3q68wmzmwx9l38dl38yypp0l8pknjl"; depends=[Biostrings data_table ggplot2 ggthemes igraph Metrics plyr poweRlaw RColorBrewer repmis reshape2 stringdist stringr]; }; - imp4p = derive2 { name="imp4p"; version="1.0"; sha256="1cny84gml1vca1l2jfcjr6aq3mz8a82wbgj5m6234gvwrf6bq7h9"; depends=[Iso missForest missMDA norm Rcpp truncnorm]; }; + imp4p = derive2 { name="imp4p"; version="1.1"; sha256="1zl3lfqh3gjfwd2kjxp8ijxni07b7xv0zhmrx8jnsng85sx3mzdf"; depends=[Iso missForest missMDA norm Rcpp truncnorm]; }; impactflu = derive2 { name="impactflu"; version="0.1.0"; sha256="0wpaq2q61g6hl9fffs5cjbzdz1qc8dxsbknfs0iarwkn08460bn5"; depends=[dplyr glue lubridate magrittr Rcpp rlang tibble]; }; impimp = derive2 { name="impimp"; version="0.3.1"; sha256="0xkxph4f1rcpkryx9v339bfbsnq3xwdj1flb4j2dgh99apj126sq"; depends=[]; }; implicitMeasures = derive2 { name="implicitMeasures"; version="0.2.0"; sha256="0w0dwnzfhw5v5j7q3zpfsca4ydmq7b9fzspvyf9sibyh587isb9c"; depends=[ggplot2 stringr tidyr xtable]; }; implied = derive2 { name="implied"; version="0.3.1"; sha256="11mrvpsh9qc5a5s5mpbsksri6vx36ij1gvpli6lyz6dkg48a9kdn"; depends=[]; }; - implyr = derive2 { name="implyr"; version="0.3.0"; sha256="1i0m95azyi46wnh59dcs52l78i1yqy677rlr4b6c0r945m67advn"; depends=[assertthat DBI dbplyr dplyr rlang tidyselect]; }; + implyr = derive2 { name="implyr"; version="0.4.0"; sha256="0rblsmx1z2n4g3fims5wa3wyf5znr0gkwd2yfz3130bcm6346da0"; depends=[assertthat DBI dbplyr dplyr rlang tidyselect]; }; r_import = derive2 { name="r_import"; version="1.2.0"; sha256="018s0x224gqnv4cjfh0fwliyfg6ma9vslmwybrlizfsmqcc5wp37"; depends=[]; }; importar = derive2 { name="importar"; version="0.1.1"; sha256="0xv445fmjhsbdlsq03k2rlycnggn3rcyq5a49zrg4jvjamzr0rgr"; depends=[]; }; - importinegi = derive2 { name="importinegi"; version="1.1.2"; sha256="11mr3kw7y015w6892cz73qm77rhcsm86b4hlb34aqcbcqqqxlxrv"; depends=[data_table dplyr foreign haven rgdal]; }; + importinegi = derive2 { name="importinegi"; version="1.1.3"; sha256="1r0p01mc9wb24ifldn3dmi0fqxwkp0290h0qrgr72grd34v2xszc"; depends=[data_table dplyr foreign haven rgdal]; }; impressionist_colors = derive2 { name="impressionist.colors"; version="1.0"; sha256="03z5w7y7vbvlnn30r9y3ip93h364f87nhwdb9hcki26csiq2bnlv"; depends=[]; }; imptree = derive2 { name="imptree"; version="0.5.1"; sha256="0f087000092ydnpj3ch4mbip8wp32scn8xw4vlkq5lf6130gfs1b"; depends=[Rcpp]; }; - imputeFin = derive2 { name="imputeFin"; version="0.1.1"; sha256="0q1vhnwsds3j4s0r2drqm7xrnwqzmr9fnxpfafwk6lj9jrlp98fx"; depends=[MASS zoo]; }; + imputeFin = derive2 { name="imputeFin"; version="0.1.2"; sha256="11qd43zs8gd3fg3f47lrb6b4r0w7kxczain61bxc67ppzflrafmd"; depends=[magrittr MASS mvtnorm zoo]; }; imputeLCMD = derive2 { name="imputeLCMD"; version="2.0"; sha256="10v3iv1iw6mnss6ry836crq9zdgid2y1h3pvigzjsrmnp5n89mfz"; depends=[impute norm pcaMethods tmvtnorm]; }; imputeMDR = derive2 { name="imputeMDR"; version="1.1.2"; sha256="0ds5a4wav9vb9z5nji8hv5l76310rd970xf702fd0ckx1sh6rgd7"; depends=[]; }; imputeMissings = derive2 { name="imputeMissings"; version="0.0.3"; sha256="1dfhi235j1qz2mv89j92b903j5mdwlzisiyvvi9mmiacdj5ln89z"; depends=[randomForest]; }; imputeMulti = derive2 { name="imputeMulti"; version="0.6.4"; sha256="0ngjbj8pl5mwprrgy234a5p9dhf615z7ymfv8184hby1z6ib3mgl"; depends=[DBI gtools Rcpp RSQLite]; }; imputePSF = derive2 { name="imputePSF"; version="0.1.0"; sha256="0xfd2mybg0cbi3n35j28s4xq4iwr5rq4mqwgdqml7l2rlzidcwc8"; depends=[PSF]; }; imputeR = derive2 { name="imputeR"; version="2.2"; sha256="0jfyl6k285x4lc58q13fhi004l4yaqas0d4g08rx78ml7p6l1r48"; depends=[reshape2]; }; - imputeTS = derive2 { name="imputeTS"; version="3.1"; sha256="09drjpmnmszzk20y8vnifxm0lm72zwp48vmqdc3490p5cncnm3zs"; depends=[forecast ggplot2 ggtext magrittr Rcpp stinepack]; }; + imputeTS = derive2 { name="imputeTS"; version="3.2"; sha256="19kzwa4xih7y1rilgqa945d35agma9qfnj9fraancy49b06axrx9"; depends=[forecast ggplot2 ggtext magrittr Rcpp stinepack]; }; imputeTestbench = derive2 { name="imputeTestbench"; version="3.0.3"; sha256="0yc1l3r7g7x2pgyli6j08ikvsbvr24kijnn7pdj54blw7c0pdmm2"; depends=[dplyr forecast ggplot2 imputeTS reshape2 tidyr zoo]; }; imputeYn = derive2 { name="imputeYn"; version="1.3"; sha256="1b21w1aa5f7yiq8k0wa86wvbg4ij7f6ldwn6asfqwb0b90rvsgvs"; depends=[boot emplik mvtnorm quadprog survival]; }; - imsig = derive2 { name="imsig"; version="1.0.0"; sha256="01ww48x9a189dvr81bangfhchr70l0sg26jdpcxf41nh2fmslfxx"; depends=[ggplot2 gridExtra HiClimR igraph RColorBrewer survival]; }; + imsig = derive2 { name="imsig"; version="1.1.3"; sha256="175is0b39grc609dskv9274czv4iwnmlg81dl4nr01xdp6f7g487"; depends=[ggplot2 gridExtra HiClimR igraph RColorBrewer survival]; }; in2extRemes = derive2 { name="in2extRemes"; version="1.0-3"; sha256="1lgsqm29zmjyf8kynyra2p3q7bs4fyd7ac4v6s3pbahzhhzdk94y"; depends=[extRemes]; }; inTrees = derive2 { name="inTrees"; version="1.2"; sha256="1mwn2ijkyw0y9xcgrr56wxd2326ikarlsi79l59dplvlx2iwbi6c"; depends=[arules data_table gbm RRF xgboost xtable]; }; inaparc = derive2 { name="inaparc"; version="1.1.0"; sha256="0ni34bkl7v1ypci8j8qhkfbf7gnx77wi4v9w1ww18z2jizsrk5h3"; depends=[kpeaks lhs]; }; @@ -9896,22 +10291,23 @@ in with self; { incR = derive2 { name="incR"; version="1.1.0"; sha256="0q41bs7pf6hqyfwvcwc2sxq44jq95qq3qsddz53f8gphwjsyf1v7"; depends=[dplyr ggplot2 lubridate maptools rgeos]; }; inca = derive2 { name="inca"; version="0.0.4"; sha256="1r3niibd6pja59am8in9gpyvxi2g5bh8bqqhdixzwaj3xzyyipii"; depends=[Matrix Rcpp RcppArmadillo]; }; incadata = derive2 { name="incadata"; version="0.9.1"; sha256="0987zazkp3cxvk88i3yqb70s2i1cg108vc8wyhh2867s3rqdrpgh"; depends=[decoder rvest sweidnumbr xml2]; }; - incase = derive2 { name="incase"; version="0.2.0"; sha256="0ja00xhiq92sm00gmfkgziqkqhqb3pkf2vkf2c1mggfxp3pa9aqf"; depends=[magrittr plu rlang]; }; + incase = derive2 { name="incase"; version="0.3.0"; sha256="0wx5j50rbwxg1nsxhhwjcjzd96kgbw8raz6h0k8pbg102hcac0g0"; depends=[backports magrittr plu rlang]; }; incgraph = derive2 { name="incgraph"; version="1.0.1"; sha256="0zjvxk2krdlm5bcr0m80nxy46f69a1xadfjw5sjw249b28wdclml"; depends=[BH dplyr orca purrr Rcpp testthat tibble]; }; incidence = derive2 { name="incidence"; version="1.7.3"; sha256="1wdxh2p7scm419fqki0i7vsz45rd7557h5n3zf9fshb8x1fdf2z7"; depends=[aweek ggplot2]; }; - incidence2 = derive2 { name="incidence2"; version="0.2.2"; sha256="1rmz0v091x90m8q834qnfifbyc6bmn8f538y1qv7scx043f5rb1s"; depends=[aweek data_table dplyr ellipsis ggplot2 magrittr pillar tibble vctrs]; }; + incidence2 = derive2 { name="incidence2"; version="1.0.0"; sha256="1g18rd5z1k3is90yyqgxyjyqad2d35n8zig26dp35pn1klhjx2gf"; depends=[data_table ellipsis grates pillar rlang tibble tidyselect vctrs]; }; incidental = derive2 { name="incidental"; version="0.1"; sha256="012pdwrkzlbnrrkvy67l6nvs1lrjgrzhfh3v4rqzk2ypdvfm3wmx"; depends=[dlnm ggplot2 MASS matrixStats numDeriv]; }; inctools = derive2 { name="inctools"; version="1.0.15"; sha256="0ikldiwgizs2p9vcalk5729dr6krysnyr4ni0ybg9gljw7iafdlf"; depends=[binom cubature doParallel dplyr foreach ggplot2 glm2 magrittr plyr pracma rlang tibble tmvtnorm]; }; indelmiss = derive2 { name="indelmiss"; version="1.0.9"; sha256="0i4qnvc0xb3ngnk8xdscmx7qnicfs7s6czawf6schb1nh2pjpzyq"; depends=[ape numDeriv phangorn Rcpp]; }; independence = derive2 { name="independence"; version="1.0.1"; sha256="0yln5wd8m5fgh4h7k80vq22byf06k4d6574zxyqcig63hls7v568"; depends=[Rcpp]; }; indicspecies = derive2 { name="indicspecies"; version="1.7.9"; sha256="1xza0ha42frz5wizf268j49y3201vpsm4kgj0czsw9wygzjl008f"; depends=[permute]; }; + indiedown = derive2 { name="indiedown"; version="0.1.1"; sha256="0r46r6s0asd182gs5map4wilhfb7jhgrcinnl36ib3q1xxn06457"; depends=[cli fs gfonts rlang withr]; }; indirect = derive2 { name="indirect"; version="0.2.0"; sha256="1k7xwsx655nzl43s1mkaysyn5gydq973gynmqip67lssnm7cnch4"; depends=[gplots MASS]; }; inegiR = derive2 { name="inegiR"; version="3.0.0"; sha256="1rhkdmpz7mxi7ddyygss5rlh3c8hgxhzdk3fnvnlizc1l55cc6c0"; depends=[jsonlite lubridate plyr tibbletime XML zoo]; }; ineq = derive2 { name="ineq"; version="0.2-13"; sha256="09fsxyrh0j7mwmb5hkhmrzgcy7kf85jxkh7zlwpgqgcsyl1n91z0"; depends=[]; }; ineqJD = derive2 { name="ineqJD"; version="1.0"; sha256="0anv384jwzn5gkc0jqsl81bkmrjd21br99c5q30xd6ncxavj4s57"; depends=[]; }; - infer = derive2 { name="infer"; version="0.5.3"; sha256="1q0lnxnv8krv4n9z80sh4b442s89rvnbph5bddy34z83bkncwv2g"; depends=[dplyr ggplot2 glue magrittr purrr rlang tibble]; }; + infer = derive2 { name="infer"; version="0.5.4"; sha256="0wvvgqjhyv7ql98cjzqad61wbmk7xrqd1ybk894jr5cmza13c8w2"; depends=[dplyr ggplot2 glue magrittr purrr rlang tibble]; }; inference = derive2 { name="inference"; version="0.1.0"; sha256="0j92isfkbhk13yx2hd3a5dd7ikcbgjc04zisd1n5kmg6ajw2aj6r"; depends=[sandwich]; }; - inferference = derive2 { name="inferference"; version="1.0.0"; sha256="1x6i8ycba9z57m1n143p1j9pmlfrhjhi4iw0fsny8xmcvqrlr85p"; depends=[Formula lme4 numDeriv]; }; + inferference = derive2 { name="inferference"; version="1.0.2"; sha256="171h9zhvaza7fklcg07wk9sm8k2fy39k3cdjkzb3vk8p8acd051v"; depends=[Formula lme4 numDeriv]; }; inferr = derive2 { name="inferr"; version="0.3.0"; sha256="1z5bfq0gv1h6iw8nwc19ar6f2sgsvgs3ghq52s09wclqk2yy4azz"; depends=[dplyr magrittr purrr Rcpp rlang shiny tibble tidyr]; }; infinitefactor = derive2 { name="infinitefactor"; version="1.0"; sha256="0j6f9q8z81znwakyx4h0l8ypz0y4yv11d7l3rwljmn4rgspyjl5c"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; infix = derive2 { name="infix"; version="0.1.0"; sha256="1zgy8f8b9pmpvpgqh3niczkr94xkc53xcjim73djmd10azw3kgrk"; depends=[magrittr]; }; @@ -9920,7 +10316,7 @@ in with self; { influence_SEM = derive2 { name="influence.SEM"; version="2.2"; sha256="1cabl6486mlrmk0418s18wii3n6nl1ckv6w9281wdk4fy27y9qk2"; depends=[lavaan]; }; influenceAUC = derive2 { name="influenceAUC"; version="0.1.2"; sha256="0pscwfxs2y780lzd5sxldnnkzzs2lsjdwz71z44kn7884wqmikpm"; depends=[dplyr geigen ggplot2 ggrepel ROCR]; }; influenceR = derive2 { name="influenceR"; version="0.1.0"; sha256="12p9362hkndlnz1rd8j2rykg57kbm6l7ks60by3rd25xg50k5jag"; depends=[igraph Matrix]; }; - influential = derive2 { name="influential"; version="2.0.1"; sha256="1ry439k88i59znvssv0x831ixlhblsqxnwd7pwdsr15yj2xqc28q"; depends=[coop ggplot2 igraph ranger reshape2]; }; + influential = derive2 { name="influential"; version="2.2.2"; sha256="0553ipn9djdayjsq1pd0gw2bxxrqj7v18pay0idqwx0hl3bghz2y"; depends=[coop ggplot2 igraph janitor ranger]; }; influxdbr = derive2 { name="influxdbr"; version="0.14.2"; sha256="03dzw86mvbc8w38q9skjki1z17vc04k9q8dx7sd3xg6xbr10f9d9"; depends=[dplyr httr jsonlite magrittr purrr rlang tibble tidyr xts zoo]; }; infoDecompuTE = derive2 { name="infoDecompuTE"; version="0.6.2"; sha256="0r1capiv4zr31dsy0sqly9zb00i86zq2ihbgsmb5g4cy0f04xlqz"; depends=[MASS]; }; informR = derive2 { name="informR"; version="1.0-5"; sha256="16pz47wlr1gr8z5hdnrjpczm967khqiqgdfiw15a0bby6qdvni2y"; depends=[abind relevent]; }; @@ -9928,10 +10324,10 @@ in with self; { infra = derive2 { name="infra"; version="0.1.2"; sha256="0jycnnmrrjq37lv67xbvh6p63d6l4vbgf3i1z9y7r75d6asspzn1"; depends=[]; }; infraFDTD_assist = derive2 { name="infraFDTD.assist"; version="0.6"; sha256="04j5nl5vxk79iciz6s9bpiyn319c2dbh7fdahgwira2r30w2fxv9"; depends=[fields]; }; infutil = derive2 { name="infutil"; version="1.0"; sha256="02d0hfbkdqjj0lm1fzwwxy60831kbcjn2m4rfblpib0krkbpz72n"; depends=[ltm]; }; - ingredients = derive2 { name="ingredients"; version="2.0"; sha256="084ywbq0dwnf075bazz40n23wh7r1fwl6zs7xqkcg07kfzqkzb2w"; depends=[ggplot2 gridExtra scales]; }; + ingredients = derive2 { name="ingredients"; version="2.2.0"; sha256="11bv4l4fn9kr7y2nfzrwnaya8fi9w3nwcm9vzlqb7dva83rkqbsc"; depends=[ggplot2 gridExtra scales]; }; ini = derive2 { name="ini"; version="0.3.1"; sha256="04yqij344dwm0xqgara8xia42mlmij3i8711qbb5534w05a1l6bv"; depends=[]; }; injectoR = derive2 { name="injectoR"; version="0.2.4"; sha256="0sa32cspp6y3m04yfmd02kxx55mk7l9jxf4r9pk1a6k3sqnj6fl8"; depends=[]; }; - inlabru = derive2 { name="inlabru"; version="2.1.13"; sha256="1khsfhays6xna060f4h0rc7yjsq89xl42d36fy33ixgk0rh9vlnc"; depends=[ggplot2 Matrix rgdal rgeos sp]; }; + inlabru = derive2 { name="inlabru"; version="2.3.1"; sha256="19rljxw8rimyk6iwh5albir5lgakxqn5i96mi8p4k9rr3asx8s8k"; depends=[ggplot2 Matrix rgdal rgeos sp withr]; }; inldata = derive2 { name="inldata"; version="1.0.3"; sha256="0iz3dlmaw6p81lj406nq4sg4qvl289mn95by10r3zrikf39l0jq2"; depends=[raster sp]; }; inline = derive2 { name="inline"; version="0.3.17"; sha256="1wslsn60q959yrr27cwanba43qlpfaxzdli46i9dc26lxfr5fa3r"; depends=[]; }; inlinedocs = derive2 { name="inlinedocs"; version="2019.12.5"; sha256="11d8cnrzgq95w7hn234rcwrr1mmrv63f69807pnzxizxbgnp7wz3"; depends=[]; }; @@ -9941,27 +10337,27 @@ in with self; { inplace = derive2 { name="inplace"; version="0.1.2"; sha256="06jb8xzjqywdww8j2i59c8663dfbrhnvj0lh3xm73j39sig6vh7l"; depends=[Rcpp]; }; insane = derive2 { name="insane"; version="0.1.0"; sha256="144fq1lys6wy78vnmz1vd4ghs8agraj1hgg0vwlxcnbykmf50i95"; depends=[broom dplyr DT ggbeeswarm ggplot2 ggpubr ggthemes glue patchwork purrr readxl shiny tidyr]; }; insect = derive2 { name="insect"; version="1.2.0"; sha256="0lbck8jbhymzkhm1iqd2y2xg8a26yjizw7x31b1l1kqc1l0p3kmv"; depends=[ape aphid kmer openssl phylogram RANN seqinr xml2]; }; - insee = derive2 { name="insee"; version="0.9.0"; sha256="16dx6d8k78v89443q7pq63zj9cr8856mq1qs7lg945ha2c8k75sn"; depends=[crayon dplyr httr lubridate openssl readsdmx rlang stringr tibble tidyselect xml2]; }; - insideRODE = derive2 { name="insideRODE"; version="2.0"; sha256="1ffndk8761cpkririb3g1qsq9nwmh82lcrpql9i5fksdprvdjzcw"; depends=[deSolve lattice nlme]; }; - insight = derive2 { name="insight"; version="0.11.1"; sha256="1m95xfvai1kbzqxdggjvdbk6ax2dg4v2lrfpqn7v607g2n77n2k0"; depends=[]; }; - insol = derive2 { name="insol"; version="1.2.1"; sha256="1d2vqmbp94ff80mfkmq4a8y12r6ryym8hh1568ip9qbn7snc64v1"; depends=[raster]; }; - inspectdf = derive2 { name="inspectdf"; version="0.0.9"; sha256="1hf7xha6nbb3ysj9y7vp7x6pcyvnlq67di7ns0pxgjgb7b9qipdd"; depends=[dplyr ggfittext ggplot2 magrittr progress Rcpp tibble tidyr]; }; + insee = derive2 { name="insee"; version="1.0.0"; sha256="1g4c2lcdygdxmmrp5f723zmylxsxl5iy8vhrm4msa7flf8gda50l"; depends=[crayon dplyr httr lubridate openssl purrr rappdirs readsdmx rlang stringr tibble tidyselect xml2]; }; + insight = derive2 { name="insight"; version="0.13.2"; sha256="03b7kd17h25mi1si40ibcp3jpasyqpj51mr8js0ywywyfw7909j1"; depends=[]; }; + insol = derive2 { name="insol"; version="1.2.2"; sha256="166kgxgzbh55y2qqya6c2si22x0v7asi70im054g6xxwc5187kh3"; depends=[raster]; }; + inspectdf = derive2 { name="inspectdf"; version="0.0.11"; sha256="19ainhxgda58cb70gwxki618wln1v1k4iwvnlvy6s7aldry4wgc4"; depends=[dplyr ggfittext ggplot2 magrittr progress Rcpp tibble tidyr]; }; inspector = derive2 { name="inspector"; version="1.0.2"; sha256="08dx800dikssljjvwzv6fji6pp7k7lkzjl7y1y6r1j5qxpn7z5mw"; depends=[Rdpack]; }; instaR = derive2 { name="instaR"; version="0.2.4"; sha256="0c4m471ragkpksr0h21cdgnjxcknf01xqz543dahxgzjg9ncjwhg"; depends=[httr jsonlite]; }; install_load = derive2 { name="install.load"; version="1.2.3"; sha256="0z4klcpwdlmhwvk41z9q4c4382z8glad27h0gai93zyciy44sdyx"; depends=[assertthat checkmate fastmatch]; }; insuranceData = derive2 { name="insuranceData"; version="1.0"; sha256="0wryh8i1v3bnpbqn6d6dpxr9bwwl6mnh5cb5igz0yanh4m1rx96w"; depends=[]; }; - insurancerating = derive2 { name="insurancerating"; version="0.6.3"; sha256="076xpgxqc9m5chd3wjr0k7xhcx8zffynz89yqjqrw9yv8cx0lhk6"; depends=[ciTools classInt data_table DHARMa dplyr evtree ggplot2 insight lubridate magrittr mgcv patchwork stringr tidyr]; }; + insurancerating = derive2 { name="insurancerating"; version="0.6.5"; sha256="0bzdfg76gigacyiwsv5saprsqi6l9cj2plvlwzn54cixwxcsh5sf"; depends=[ciTools classInt colorspace data_table DHARMa dplyr evtree ggplot2 insight lubridate magrittr mgcv patchwork scales stringr tidyr tidyselect]; }; intRegGOF = derive2 { name="intRegGOF"; version="0.85-5"; sha256="0xjq8vdlgqlzrvp752gd4qfrpnpapx7k6xzfsvfril8ngvm9a162"; depends=[]; }; intRvals = derive2 { name="intRvals"; version="1.0.0"; sha256="0391raj5wq6issvzqm8bfnv1ap2hh5nfsqi9r1x5ss37fvcq5fjm"; depends=[lme4 plyr]; }; intamap = derive2 { name="intamap"; version="1.4-9"; sha256="060sghkqsdrxpa340rvjskh2wafdkffa5q8nlbg1msnsmk639lkn"; depends=[automap doParallel evd foreach gstat MASS mvtnorm rgdal sp]; }; - intamapInteractive = derive2 { name="intamapInteractive"; version="1.1-12"; sha256="1h8kzinfpp2rwal11xqs9g99rmigs0jlsr5h0qh0zsill73minid"; depends=[automap gstat intamap rgdal sp spatstat spcosa]; }; + intamapInteractive = derive2 { name="intamapInteractive"; version="1.1-13"; sha256="1qw91rf8f2x7xky2wqir78bli4jvwh9fwm0yl3x863j5f7nccfjx"; depends=[automap gstat intamap rgdal sp spatstat_geom]; }; intccr = derive2 { name="intccr"; version="3.0.2"; sha256="1v2zhyap414w41dgy2jjz3fnrvk0vawf02dvb1nprrid7fqsnf9i"; depends=[alabama doParallel foreach MASS]; }; intcensROC = derive2 { name="intcensROC"; version="0.1.2"; sha256="0f1yf7wn0qd0xa9x2lsdicwjisy39bvyrbayjl8m6hb7h0ng0v2m"; depends=[pracma Rcpp RcppEigen]; }; intdag = derive2 { name="intdag"; version="1.0.1"; sha256="0mb0a1ccc67clfa75b4hl901zdmx7fxw713c4ybx3i5wc2ldl8ph"; depends=[]; }; integIRTy = derive2 { name="integIRTy"; version="1.0.6"; sha256="0nyp9nixwyz1n2nydkh64lmd5z4qjcabwa1pyzv69rgw5gx60020"; depends=[abind doParallel foreach ltm MASS mclust]; }; integr = derive2 { name="integr"; version="1.0.0"; sha256="172vj29bdk42ibgwj7dl06wslpg2dccp1i8iscbz1yd0j5kw36sq"; depends=[DiagrammeR DiagrammeRsvg dplyr gtools rsvg]; }; - intensegRid = derive2 { name="intensegRid"; version="0.1.0"; sha256="0frdrkfpqd8zbl8zawr1xrgs4ylsdir88mqb8w502zf7ishg624m"; depends=[dplyr httr jsonlite lubridate magrittr purrr rlang tibble tidyr]; }; + intensegRid = derive2 { name="intensegRid"; version="0.1.1"; sha256="15vjf39fx6bkay15nbmqnv5vp8w6xy6fzf1lglqr6506pyaqh8w8"; depends=[dplyr httr jsonlite lubridate magrittr purrr rlang tibble tidyr]; }; intensity_analysis = derive2 { name="intensity.analysis"; version="0.1.6"; sha256="1ydmn7njqk6i2667zaha8mvfndss4im39czadg1f3z6sndp2lsji"; depends=[diffeR ggplot2 raster reshape2 rgdal]; }; + interacCircos = derive2 { name="interacCircos"; version="1.0.0"; sha256="1waj0saavvaw2qzhbwcj1k0a2dnmq7zbkdnmb93xj6j1lhfjhbdy"; depends=[htmlwidgets jsonlite plyr RColorBrewer]; }; interactionR = derive2 { name="interactionR"; version="0.1.1"; sha256="1gw1kvv76rrfsq67dyhm5ydpb1y5fxp6jqfcqdw50f4k0m76z55k"; depends=[car flextable msm officer]; }; interactionTest = derive2 { name="interactionTest"; version="1.2"; sha256="0ycr839l07xahakr4r2jvlmd0fcxfm4qi3g8agnyh24c2kwl3ck2"; depends=[]; }; interactions = derive2 { name="interactions"; version="1.1.3"; sha256="11nn3w4qsnh0idf7cwnrclg9h8vdjfl9rbvfk1c4l65pm4f61xrv"; depends=[cli crayon generics ggplot2 jtools rlang tibble]; }; @@ -9971,10 +10367,10 @@ in with self; { intergraph = derive2 { name="intergraph"; version="2.0-2"; sha256="1ipxdrfxhcxhcbqvrzqh3impwk4xryqlqlgjl7f2mwrf365zs6ph"; depends=[igraph network]; }; interim = derive2 { name="interim"; version="0.8.0"; sha256="1hcq1cx6fv4ivvyd3ww3gsbw12g6rw83qqqbrcgzlnjl1q0jh3nf"; depends=[]; }; interimApp = derive2 { name="interimApp"; version="0.0.1"; sha256="1g2f1plsgzqf277jy2afhchjlcamr9znm02rj4rvky7nnp63gph0"; depends=[interim shiny shinyBS]; }; - interleave = derive2 { name="interleave"; version="0.1.0"; sha256="1ppbryy3awymkg9fhwddfzfygvda3wmrw5lff3rjsirk7q1wimlx"; depends=[geometries Rcpp]; }; + interleave = derive2 { name="interleave"; version="0.1.1"; sha256="0316nzcms9hawjvslvbkpb5rg3jbmzsy1dzvmy1hi80zlyrm891v"; depends=[geometries Rcpp]; }; interlineaR = derive2 { name="interlineaR"; version="1.0"; sha256="0y1ym6iwly8sv94pdzwv2qy1g7z4hpqlrbcrpb1ds5a62a6axqj5"; depends=[reshape2 xml2]; }; interp = derive2 { name="interp"; version="1.0-33"; sha256="115yz7vvlga24m5dz3kirr2vzh59ki3gypvxwvaab8zy2mqr47v6"; depends=[deldir Rcpp RcppEigen]; }; - interplot = derive2 { name="interplot"; version="0.2.2"; sha256="10licnz1x97ky7plq3j5gf23lg14jcx7bavv9mwib7p39ls5lagq"; depends=[abind arm dplyr ggplot2 gridExtra interactionTest purrr]; }; + interplot = derive2 { name="interplot"; version="0.2.3"; sha256="1qs0ni16rbjilkahn15yn9sil3ba4n935bxpdbpwlsjina504jqj"; depends=[abind arm dplyr ggplot2 interactionTest purrr]; }; interpret = derive2 { name="interpret"; version="0.1.26"; sha256="0f7bhz5gj0f5dxjcc9xlrx4y474akn6q0d7z71yypyw6bawvqkbn"; depends=[]; }; interpretR = derive2 { name="interpretR"; version="0.2.4"; sha256="0nfh3pyr7nn0r41xk0mfb4fs5rjkbh43lbw14x7pdmbgzpgsc22c"; depends=[AUC randomForest]; }; interval = derive2 { name="interval"; version="1.1-0.7"; sha256="1b31lh0sv7lzy76230djipahxa10lblbr37kdiigr6hp3dd1xmz9"; depends=[Icens MLEcens perm survival]; }; @@ -9982,18 +10378,17 @@ in with self; { intervals = derive2 { name="intervals"; version="0.15.2"; sha256="0mvwfwc03ifb30a3dzbmkv9adwqb8ajxhcw24d8xip8px063plhb"; depends=[]; }; intervcomp = derive2 { name="intervcomp"; version="0.1.2"; sha256="1l6x1fl84li6is3b92b96q3fbv0rpgqy2lvw9cbi2cq8nh9imnyx"; depends=[]; }; interventionalDBN = derive2 { name="interventionalDBN"; version="1.2.2"; sha256="0wpp4bfi22ncvl0vdivniwwvcqgnpifpgxb4g5jbyvr0z735cd9w"; depends=[]; }; - inti = derive2 { name="inti"; version="0.1.2"; sha256="09v91nvd9gq5i5dy4xi9jm4vgd0zr6ydk5fhs200x1nqlhxyfzp5"; depends=[agricolae dplyr DT emmeans FactoMineR ggplot2 lme4 purrr shiny stringr tibble tidyr]; }; + inti = derive2 { name="inti"; version="0.3.0"; sha256="1plz2ld5damfll27xxgcy166p1c7d1s2zbzdp362hvqn838qkkl7"; depends=[agricolae dplyr DT emmeans FactoMineR ggplot2 lme4 purrr shiny stringi stringr tibble tidyr]; }; intkrige = derive2 { name="intkrige"; version="1.0.1"; sha256="1p3fn5nzn1iliy025187k590qrsw3z3d47p67gzwwd6h050yrl86"; depends=[gstat raster Rcpp RcppArmadillo Rdpack sp]; }; intmed = derive2 { name="intmed"; version="0.1.2"; sha256="0amcqzinj35yvb9nfy808bz098dqmnds13z335lgqm6sykriyjpl"; depends=[doParallel dplyr foreach MASS mice stringr tibble]; }; - intoo = derive2 { name="intoo"; version="0.4.0"; sha256="0s4jii34cgvyi573z569l1827yf90vj4ih9krsgvpbvk7lfdbagg"; depends=[]; }; intrinsicDimension = derive2 { name="intrinsicDimension"; version="1.2.0"; sha256="0cka20ifxx9njnvp18bzhrvmh3cwjnxkc0a23qzi43dahc51ijbc"; depends=[yaImpute]; }; introgress = derive2 { name="introgress"; version="1.2.3"; sha256="1j527gf7pmfy5365p2j2jbxq0fb0xh2992hj4d7dxapn4psgmvsk"; depends=[genetics nnet RColorBrewer]; }; intrval = derive2 { name="intrval"; version="0.1-2"; sha256="1fbgl2r359aml6cfz8x7h0381kxfx1dy0hr0c7012vr66f6c2lhi"; depends=[]; }; - intsurv = derive2 { name="intsurv"; version="0.2.1"; sha256="1vkqxd08g2mbci3g543d1cil890ia39bp6yv86l5jdh5ry9174pc"; depends=[Rcpp RcppArmadillo]; }; + intsurv = derive2 { name="intsurv"; version="0.2.2"; sha256="02ds4gikrgg19knylg68ziani702dyhqc37fhf9j7awa1qxy2r9l"; depends=[Rcpp RcppArmadillo]; }; intsurvbin = derive2 { name="intsurvbin"; version="0.0.4"; sha256="119zjn1agl2j4fj4yg1pq1sqskzw93xfzppmc5n1x8llmfbxkqsj"; depends=[mgcv MHadaptive msm mvtnorm tmvtnorm]; }; - intsvy = derive2 { name="intsvy"; version="2.4"; sha256="19anm90rqhvdv0fsr2hbzkwsr3zc7pimq4gcg2mgj06gxqbwhym7"; depends=[foreign ggplot2 Hmisc memisc plyr reshape]; }; + intsvy = derive2 { name="intsvy"; version="2.5"; sha256="0m95srw9r80rz182iw28xc1qarv0dvijbjiq89bg7n55apwhh5wy"; depends=[dplyr foreign ggplot2 Hmisc memisc plyr reshape]; }; intubate = derive2 { name="intubate"; version="1.0.0"; sha256="03ikqwai7wdahdfyzdy42xs8qpdhl9gmbak2qd82yxjl62956i8c"; depends=[]; }; - inum = derive2 { name="inum"; version="1.0-1"; sha256="16d09391l65w557dkzhhx1aqn1ljamcmjj3yh42pwq037k0r8brw"; depends=[libcoin]; }; + inum = derive2 { name="inum"; version="1.0-4"; sha256="1khkzja8lwn9075864vbyajqina9m588ahf1fsrrajrsqilyzssz"; depends=[libcoin]; }; invGauss = derive2 { name="invGauss"; version="1.1"; sha256="0l93pk2sh74dd6a6f3970nval5p29sz47ynzqnphx0wl3yfmmg9c"; depends=[optimx survival]; }; invLT = derive2 { name="invLT"; version="0.2.1"; sha256="0dcr2cclgzkvsw1lysmjrkwgahas96rjc328yc7a1a56pf62kw2v"; depends=[]; }; invacost = derive2 { name="invacost"; version="1.0"; sha256="1qy7a59ml1bxfsg161qhhz5iw5kcml4l31la44ippyiail32vn3m"; depends=[dplyr earth ggplot2 lmtest mgcv quantreg robustbase sandwich scales]; }; @@ -10016,20 +10411,18 @@ in with self; { ipa = derive2 { name="ipa"; version="0.1.0"; sha256="029vz7pb37vnqm7x6h53p0y7z0nx2s36yklyfn9sz21gknsi983j"; depends=[stringi]; }; ipaddress = derive2 { name="ipaddress"; version="0.5.1"; sha256="128r4nbqrmmnxb85hvs32xybp32svn4c5096p3s052jhc30bj273"; depends=[AsioHeaders BH Rcpp rlang vctrs]; }; ipc = derive2 { name="ipc"; version="0.1.3"; sha256="10h54j83l7khk1lkpdwn6hwaz31i3v6svg4q1lxzvr2aqdsj7hy0"; depends=[R6 shiny txtq]; }; - ipcwswitch = derive2 { name="ipcwswitch"; version="1.0.3"; sha256="1pqlfkglgsahzsw7z9wsx7k0i9n0kx77g9p1j7i9dz7j74s6g09r"; depends=[survival]; }; - ipdmeta = derive2 { name="ipdmeta"; version="2.4"; sha256="0k9wqpmrvqdh73brmdzv86a2dbyddjyyyqzqgp1vqb3k48k009s2"; depends=[nlme]; }; + ipcwswitch = derive2 { name="ipcwswitch"; version="1.0.4"; sha256="12z16c8sv1nhdv70kwx1a0wh588znkv5y5r0s9kcws0n3rjhzh9p"; depends=[survival]; }; ipdw = derive2 { name="ipdw"; version="0.2-9"; sha256="1vjq5wxfmx1vfclrj68mf3w0lmsxrppin1kph38s2qzcg0y74ghg"; depends=[gdistance raster rgeos sp]; }; - ipeadatar = derive2 { name="ipeadatar"; version="0.1.1"; sha256="04jb7fas5h3i2gryfyxaxnzc3w16p2jna37didnbhvji9vdjd0cr"; depends=[curl dplyr jsonlite lubridate magrittr purrr sjlabelled stringr]; }; ipflasso = derive2 { name="ipflasso"; version="1.1"; sha256="0gf1yj35vr92qi59hffcf4hzrh2b439kfd6m745wgpxq6wic1hs3"; depends=[glmnet survival]; }; ipfp = derive2 { name="ipfp"; version="1.0.1"; sha256="12aklhf9p70r9b2wi0qgbl835b4lil805c31n1ka4kdix4b4cpr4"; depends=[]; }; ipfr = derive2 { name="ipfr"; version="1.0.2"; sha256="0q44zw5g76qfqrqv6w2a8p905n4ljxab9jmyqk6fv9vs8j2kyivg"; depends=[dplyr ggplot2 magrittr mlr tidyr]; }; ipft = derive2 { name="ipft"; version="0.7.2"; sha256="0jifmkwac5yfl110200ljm3pas3321j068af9xqzqs0av20m8hps"; depends=[apcluster cluster dplyr ggplot2 Rcpp]; }; - ipify = derive2 { name="ipify"; version="0.2.0"; sha256="05mi8i839iadpz4apkxpxx86zphkgv748mwvdgjxnz82c7s10q9k"; depends=[httr]; }; iplots = derive2 { name="iplots"; version="1.1-7.1"; sha256="1bz8n9cnx6zy3wsr49h55r0l5ikfl0xjg4r76fi4giid2a3ba4lf"; depends=[png rJava]; }; - ipmisc = derive2 { name="ipmisc"; version="5.0.1"; sha256="1fwhahhbpclr0xvnrb6hb78n9afv36jacgbsk3jfpvs10bf2np0f"; depends=[crayon dplyr magrittr rlang tibble tidyr zeallot]; }; + ipmisc = derive2 { name="ipmisc"; version="6.0.0"; sha256="18fqbjfd7gyd0jp42058y0l1yaxb9a2r6aiq7wwivksjvcp8wh3b"; depends=[dplyr magrittr rlang tibble tidyr zeallot]; }; + ipmr = derive2 { name="ipmr"; version="0.0.1"; sha256="0l2x568lc4gxqy018kxr1mw3m315ka7wdc10sfvwmrcphnpkr3dw"; depends=[magrittr purrr Rcpp rlang]; }; ipptoolbox = derive2 { name="ipptoolbox"; version="1.2"; sha256="0scbny4crgr23qcp0vgsxhwmj5g5q5c1c4mb5mmb5njyvc34s01l"; depends=[AlgDesign copula evd kolmim triangle]; }; ipr = derive2 { name="ipr"; version="0.1.0"; sha256="1db06r784c6jga0anp6p5b3k47yfhr84nzxyjn52pc9zkg3yifjm"; depends=[]; }; - ipred = derive2 { name="ipred"; version="0.9-9"; sha256="0vs1hqfx7yd0xdbmfsf2gim7spkni0845cj6gswn0nhdfdq7ma0d"; depends=[class MASS nnet prodlim rpart survival]; }; + ipred = derive2 { name="ipred"; version="0.9-11"; sha256="04hfg27c72v0fz4091w3rgbc2vd7g6yl78y9plvsvh0vjlx8ymmp"; depends=[class MASS nnet prodlim rpart survival]; }; iprior = derive2 { name="iprior"; version="0.7.3"; sha256="15qzqwikxy85fcd7psz363b5wb0kpi85icfyb47hbgdhln8fi2qb"; depends=[doSNOW foreach ggplot2 mvtnorm Rcpp RcppEigen reshape2 scales]; }; ips = derive2 { name="ips"; version="0.0.11"; sha256="02jxanfhsjrabj33nwjv71vdc87hiyzikyqrfdj9ix6dky6lm199"; depends=[ape phangorn plyr seqinr XML]; }; iptmnetr = derive2 { name="iptmnetr"; version="0.1.8"; sha256="040ym8560x0yzn9m0pb3awhcpjmsaj66vlqhmgha6mzd140wpqra"; depends=[httr jsonlite]; }; @@ -10043,14 +10436,15 @@ in with self; { irace = derive2 { name="irace"; version="3.4.1"; sha256="1dhlspv1gqg7cm7j95zhl0k2zr0s159krjmxm07k5fp68ax95sky"; depends=[R6]; }; ircor = derive2 { name="ircor"; version="1.0"; sha256="07apa4l4ib11xw25d44b403s3la29sqlid13q41hjrlfxafm91ld"; depends=[]; }; irg = derive2 { name="irg"; version="0.1.1"; sha256="0g5rhahiq2k269n8ip4yj6ncra07j7flraphzxmis931sfpdsvam"; depends=[data_table RcppRoll]; }; - iriR = derive2 { name="iriR"; version="0.1.0"; sha256="07f7xdyssjbrlkvy33v8764hfn8jh1d3byvmky2wpmpa8qn1xmkw"; depends=[dplyr ggplot2 ggsci gsheet reshape2 scales WDI]; }; + iriR = derive2 { name="iriR"; version="0.2.2"; sha256="0dzjafj2bnp9ss173pmzx61l50rr9a5lpiljjlf7y1pai9k0aay8"; depends=[dplyr ggplot2 ggsci gsheet reshape2 scales WDI]; }; irlba = derive2 { name="irlba"; version="2.3.3"; sha256="1h7mzrqdjc41814cf6c93sbyl7nxwvsf3x8apl9rhmydgdlk7qkf"; depends=[Matrix]; }; irr = derive2 { name="irr"; version="0.84.1"; sha256="1hs4ylqm51smrmgsph7z9arwkz5px2a320acar324fkjdd3yifp7"; depends=[lpSolve]; }; irrCAC = derive2 { name="irrCAC"; version="1.0"; sha256="1j9z8vz5zcl51a8qq6maf9sw0dqaknkrai7gp31mzag7b6vwms06"; depends=[]; }; irrICC = derive2 { name="irrICC"; version="1.0"; sha256="0vi5g97kbyhwxz242d1hpqf11izd3kmlzh3997v07md1llcsp6s3"; depends=[]; }; - irrNA = derive2 { name="irrNA"; version="0.1.4"; sha256="1i7s4c285dw1s2kiq01a81cfpd2v40y26yklr06xlmqp28iwslbr"; depends=[irr]; }; + irrNA = derive2 { name="irrNA"; version="0.2.2"; sha256="1l7ln5ahwnjvvd5gmismwfvljkg6vpipgi7hlcdlqlxadl165pry"; depends=[irr]; }; irt = derive2 { name="irt"; version="0.1.3"; sha256="01hr3c9by13cif55xn6z4b9zi3k99lx8pf5qzrwj0hard0a6m936"; depends=[ggplot2 Rcpp]; }; irtDemo = derive2 { name="irtDemo"; version="0.1.4"; sha256="0rpwryybnj7b4bxn0mn1m496y85s2fpqdd78lmdl6jg1ck4j4pb3"; depends=[fGarch shiny]; }; + irtGUI = derive2 { name="irtGUI"; version="0.2"; sha256="1hyabm9wvld1b1gvcn02yyd8j1wrpfmpxkcj505az64lqj4p7yj0"; depends=[irtoys magrittr mirt psych readxl shiny shinycssloaders shinydashboard WrightMap writexl]; }; irtProb = derive2 { name="irtProb"; version="1.2"; sha256="12wnvbzkh0mx9i3iyh1v2n2f2wjsjj7ad3dgv9xj949x4nbz16j0"; depends=[lattice moments]; }; irtoys = derive2 { name="irtoys"; version="0.2.1"; sha256="0h6iiaxikhbxhbyksbjnb09qdxinlkwr2v9yzs5wslbni14paq5q"; depends=[ltm sm]; }; irtplay = derive2 { name="irtplay"; version="1.6.2"; sha256="05jqghz30lfbl4ac5p2dnqd3aphkzyy1j382qjyvcw629gahybbp"; depends=[dplyr ggplot2 gridExtra Matrix pbapply purrr reshape2 rlang statmod tidyr]; }; @@ -10060,22 +10454,22 @@ in with self; { isdals = derive2 { name="isdals"; version="2.0-4"; sha256="15p432fskdz2r8523cw122mfhvrq8vdsdsrd0kz9yfin4b5z3zfh"; depends=[]; }; isdparser = derive2 { name="isdparser"; version="0.4.0"; sha256="05xkffmiiyhas5hzdjdylbrvh6fjc2fjh7s00iwjxkp4ba7rwq3g"; depends=[data_table lubridate tibble]; }; isingLenzMC = derive2 { name="isingLenzMC"; version="0.2.5"; sha256="1pd1s3a1rv7vlxd5db1pgwdjps8w5im4zz2h3qzal9cwbis0hb51"; depends=[]; }; - island = derive2 { name="island"; version="0.2.6"; sha256="06y2a9d6qqzkh5p205k1wc2i0qcmkqgabhpk76d63pkz0ilsha6q"; depends=[]; }; - islasso = derive2 { name="islasso"; version="1.1.1"; sha256="1jqshk18g6fj51ppz8fxi2a2hydcqf469ff0h9k7lha7a46h26ff"; depends=[glmnet Matrix]; }; + islasso = derive2 { name="islasso"; version="1.2.2"; sha256="0f5rir4pl8x717nwcrmzaqsqkhlkh71nlxpzv9j417737i12zjp0"; depends=[glmnet Matrix]; }; ismev = derive2 { name="ismev"; version="1.42"; sha256="19giigxwf62cdkf7mglsca649n2ignb9bxyg9zl7im1vm3ngnmqd"; depends=[mgcv]; }; isni = derive2 { name="isni"; version="1.2"; sha256="1nw7i20fli3sg1g1dl17g8rz5bpx49gcmlyw4nvfyhdxqr38nb0r"; depends=[Formula lme4 matrixcalc mixor mvtnorm nlme nnet]; }; isnullptr = derive2 { name="isnullptr"; version="1.0.1"; sha256="0kwjxq59n3qncdw63vsdvz7v5mzbl5lmckdfgiiw35pzmahnxzh9"; depends=[]; }; - isoSurv = derive2 { name="isoSurv"; version="0.1.0"; sha256="00dbrblqdylh2z636hwxr79lk2f8sa15wqcm7m6vd5m2jdhw4xay"; depends=[Iso survival]; }; - isoband = derive2 { name="isoband"; version="0.2.3"; sha256="1zkzdc39dpw2z59bjck27nimz9a2vskmw0f7wb17s53dvy7k3lzr"; depends=[testthat]; }; - isoboost = derive2 { name="isoboost"; version="1.0.0"; sha256="0arah62y2gyjhrwjyf4hbzlzyvnx3594436pvk8jjcjyfk7bzr6c"; depends=[Iso isotone rpart]; }; + isoSurv = derive2 { name="isoSurv"; version="0.2.0"; sha256="1y6wdmxzzdl1dkvab72s2smm3brqfl0y3b9al8fnj3h2b8lw502j"; depends=[Iso survival]; }; + isoband = derive2 { name="isoband"; version="0.2.4"; sha256="0z1qpxcl8b6fi691fbdr3vrb19mn4pas1iff62zl1bafzbdvpmcn"; depends=[]; }; + isoboost = derive2 { name="isoboost"; version="1.0.1"; sha256="1c239l9rfjr8scpfq5c9rl55jabk64jchcdndjsb9s5qyx2x0qdr"; depends=[Iso isotone rpart]; }; isocat = derive2 { name="isocat"; version="0.2.6"; sha256="1d6pi2l1lfi4226890lsfa02v0df1mc8gi214icsbk4fid4jygsx"; depends=[foreach magrittr plyr raster sp]; }; isocir = derive2 { name="isocir"; version="2.0-6"; sha256="0dkxdx2g1c579q97r45shws2gylkwqlvrhmc14ddmzi45xhxlql6"; depends=[circular combinat TSP]; }; + isodistrreg = derive2 { name="isodistrreg"; version="0.1.0"; sha256="0na7jipwzr16afvz2l6wxh62mv0mrq1ma1qwxnys83zhr0dca099"; depends=[Matrix osqp Rcpp]; }; isopam = derive2 { name="isopam"; version="0.9-13"; sha256="0y1yy0922kq5jxyc40gz8sk9vlzwfkfg5swmc6lk4007g9mgc8fm"; depends=[cluster vegan]; }; isopat = derive2 { name="isopat"; version="1.0"; sha256="0fznvgycyd35dh7pbq1xhp667gsficlmycn5pcrqcbs89069xr1s"; depends=[]; }; - isoreader = derive2 { name="isoreader"; version="1.2.7"; sha256="0nk63hylm0dkisi7mpq3k5zf8bxmh8wfx3wqlxcm5dscx0k76qnd"; depends=[dplyr feather future glue lubridate magrittr openxlsx progress purrr R_utils readr rhdf5 rlang stringr tibble tidyr tidyselect UNF vctrs xml2]; }; + isoreader = derive2 { name="isoreader"; version="1.3.0"; sha256="0ghwipdq1pmap1yv7r7ph9gh006j5l6x0k00r6kka07h6j8f66lh"; depends=[dplyr future glue lubridate magrittr progress purrr R_utils readr rlang stringr tibble tidyr tidyselect UNF vctrs]; }; isotone = derive2 { name="isotone"; version="1.1-0"; sha256="0alk0cma5h3yn4w2nqcahprijsm89b0gby9najbngzi5vnxr6nvn"; depends=[nnls]; }; isotonic_pen = derive2 { name="isotonic.pen"; version="1.0"; sha256="1lgw15df08f4dhrjjfr0jqkcvxwad92kflj2px526pcxwkj7cj3i"; depends=[coneproj Matrix]; }; - isotree = derive2 { name="isotree"; version="0.1.24"; sha256="0ggx7ydiyrcng21k44pjfgsikdmmaqgk28xdi25sbp2fa0b5qbds"; depends=[Rcereal Rcpp]; }; + isotree = derive2 { name="isotree"; version="0.2.7"; sha256="0xxgwz24sf4simjylvii9dzbw6b5d5wra4y9jwm79srf4yb2lncb"; depends=[Rcereal Rcpp]; }; ispd = derive2 { name="ispd"; version="0.2"; sha256="06h4z342d17rkpr2wwck4sq79kprdq6fgqf10jg8cs1f52q6pq0h"; depends=[ibd]; }; isqg = derive2 { name="isqg"; version="1.3"; sha256="1988bc5n4b5mgxrfl1774vfgaw7rxm9vlaxnkx26phjzhlr1ix9h"; depends=[BH R6 Rcpp Rdpack]; }; istacr = derive2 { name="istacr"; version="0.1.3"; sha256="14nhd3v8l827mb1fxfhsxklzxbf4316ijp2qkc99qp7ydmxbk0rd"; depends=[curl jsonlite]; }; @@ -10090,32 +10484,32 @@ in with self; { iterpc = derive2 { name="iterpc"; version="0.4.2"; sha256="06q7l8mz8ws4nn6gb0whnlqs8my2n8z2d2g8fvv3cxd28904dg9q"; depends=[arrangements gmp iterators]; }; itertools = derive2 { name="itertools"; version="0.1-3"; sha256="1ls5biiva10pb1dj3ph4griykb9vam02hkrdmlr5a5wf660hg6xn"; depends=[iterators]; }; itertools2 = derive2 { name="itertools2"; version="0.1.1"; sha256="0yra3x9ddvn5pp3jibm69205zazv81bz0cflw4mdvxpqadaf9f96"; depends=[iterators]; }; - its_analysis = derive2 { name="its.analysis"; version="1.4.1"; sha256="0f3wn7d3j6c0hhg2gp439y5m3namlswgdln18xxbvzzr4s8kz0wx"; depends=[boot car forecast ggplot2 plyr]; }; + itraxR = derive2 { name="itraxR"; version="1.2"; sha256="0dm20d7wvahm24li9yj6x7qs7kbb2pp6bkn1i4bkjmh2jr7ybnid"; depends=[broom chemometrics compositions dplyr ggcorrplot ggfortify ggplot2 janitor readr rlang tibble tidyr tiff]; }; + its_analysis = derive2 { name="its.analysis"; version="1.6.0"; sha256="1ig7yq59y5xl1z182bbvgx8vsqs9sb1xscf6zxqn1qmy9f0ggf7v"; depends=[boot car forecast ggplot2 plyr]; }; itsadug = derive2 { name="itsadug"; version="2.4"; sha256="0759l7hhvj05dp92pz59xwrxjm9s1iwkwrdhs68l0fq57550j70l"; depends=[mgcv plotfunctions]; }; itsmr = derive2 { name="itsmr"; version="1.9"; sha256="0dmijaq6q31irwrjqv5gq1yfbgggwb3m6rwbg4lx1r9l3cqays7i"; depends=[]; }; iva = derive2 { name="iva"; version="0.1.0"; sha256="0dchb263ygilxapwsw2gpl18z12wcjsz8zz5fg7h068hmcysa88g"; depends=[Formula ucminf]; }; - ivdesc = derive2 { name="ivdesc"; version="1.0.0"; sha256="134dia4wwg7pazc92ccsb3pmsp9kpszr3j5ziyh0ld53qdmcsmz3"; depends=[knitr purrr rsample]; }; + ivdesc = derive2 { name="ivdesc"; version="1.1.0"; sha256="06jqnh6i8szygc00d6ys0wwvh9br33zmwc430q2ann1qmrkaxxj5"; depends=[knitr purrr rsample]; }; ivdesign = derive2 { name="ivdesign"; version="0.1.0"; sha256="02v2cnljz3gk7mb8q3p1i54rj6l02r4pirznnrshy092zvrvr26m"; depends=[]; }; ivdoctr = derive2 { name="ivdoctr"; version="1.0.0"; sha256="18pca08cww4x13j3ks0mr84c3jkigf09s7wrh5y8pc11ypyxbgp1"; depends=[AER coda data_table MASS Rcpp RcppArmadillo rgl sandwich]; }; ivfixed = derive2 { name="ivfixed"; version="1.0"; sha256="0a26zrkvz0ffq4zxdx5vhr1nvsi9c15s6gvc1zy2pddjz31x2xi5"; depends=[Formula]; }; ivitr = derive2 { name="ivitr"; version="0.1.0"; sha256="0fc5svmkxv0s20ipwbvkvmmh1w5gb1g6va496fa9qbf99wifnmrx"; depends=[dplyr nnet randomForest rlang]; }; - ivmodel = derive2 { name="ivmodel"; version="1.8.1"; sha256="0c0lzjvp9dzj92p65v5lqmr701ksklx06lf6fcylj2w9hczf5klw"; depends=[Formula ggplot2 Matrix reshape2]; }; + ivmodel = derive2 { name="ivmodel"; version="1.9.0"; sha256="1yb2k6ciwcfiylnlb9ncz30mz10f73rxqrxk8s099ypr5k6myajk"; depends=[Formula ggplot2 Matrix reshape2]; }; ivmte = derive2 { name="ivmte"; version="1.2.0"; sha256="19jcydb5n950av2c9j89sakjkq1jbwnarrl0hwmdy573jqh4d8a5"; depends=[Formula]; }; ivpack = derive2 { name="ivpack"; version="1.2"; sha256="0cr5acjrn41d3q0b77hlg2jmsbf1msvys9gcavm1blsryg2bc03c"; depends=[AER lmtest sandwich]; }; ivpanel = derive2 { name="ivpanel"; version="1.0"; sha256="0irjmkw3nnd8ssidvj23lr0hihlhd9acsbaznh88lknx53ijc2qv"; depends=[Formula]; }; ivprobit = derive2 { name="ivprobit"; version="1.1"; sha256="05b5gf5gmi2yrkg61n7w12qlgpnjakd1z8hhqxy6py8hahsf84gm"; depends=[Formula]; }; ivreg = derive2 { name="ivreg"; version="0.5-0"; sha256="168ra48blb4wi9f9jqnaz6914s8sz8c147mkhqvim155bd0h4s00"; depends=[car Formula lmtest]; }; ivregEX = derive2 { name="ivregEX"; version="1.0"; sha256="0zh3rqvhn8ald6lxv9kywy2v1p0nr9ijv6plhpbxc6k51zzsgyl8"; depends=[AER Formula lmtest sandwich]; }; - ivsacim = derive2 { name="ivsacim"; version="1.0"; sha256="1ay2x91vam0iv62vyl2ygx7lyh52jl9mixy6hya19hjbdshh7m5j"; depends=[lava Rcpp survival timereg]; }; + ivsacim = derive2 { name="ivsacim"; version="1.1"; sha256="0n5nkl7v8l5lcnnfls03psgsqn5xczka07x381hhyzbsdlxlyi47"; depends=[lava Rcpp survival timereg]; }; ivtools = derive2 { name="ivtools"; version="2.3.0"; sha256="1wv0r9dy893hafbbrjcjrphb8dgql71ya4zfbkl5dfp7d4ncfxl0"; depends=[ahaz data_table nleqslv numDeriv Rcpp survival]; }; ivx = derive2 { name="ivx"; version="1.1.0"; sha256="1dg09aajk9rqmrlwq4xw7qd5ra1z8wjxipy5l85sl1nzii250drq"; depends=[Rcpp RcppArmadillo]; }; jSDM = derive2 { name="jSDM"; version="0.1.0"; sha256="0lkapg6v5lh53vnsg5hcr9qis8qimb6ilds23dqcyhi6w3dys9nb"; depends=[coda corrplot Rcpp RcppArmadillo RcppGSL]; }; jSonarR = derive2 { name="jSonarR"; version="1.1.1"; sha256="054q3ly471xa64yyz2as6vkr440ip1y8n5wl6s3zbhqy3bqkdqif"; depends=[jsonlite RCurl]; }; jaatha = derive2 { name="jaatha"; version="3.2.1"; sha256="0zqvylknvymggw5jl40cfyahfjy64wb25f0qymh78xbamv1hc85w"; depends=[assertthat R6]; }; - jabr = derive2 { name="jabr"; version="0.1.2"; sha256="19hcg2jn7vxmnqwq1828396pgnq53nyw30s19rhy1d7rk5k7dy1p"; depends=[ckanr dplyr glue httr magrittr pillar purrr rappdirs rlang stringr tibble tidyr]; }; jaccard = derive2 { name="jaccard"; version="0.1.0"; sha256="1dmla6qc1k8iw2d7zfjqhf13gqd2lpsrj09yh47ljf994fpab936"; depends=[dplyr magrittr qvalue Rcpp]; }; jack = derive2 { name="jack"; version="1.1.1"; sha256="1mp7cfmh3bzfansb3dyqq347qk6kkf4ndn23pbd78h1xcb54555b"; depends=[DescTools gmp multicool mvp partitions]; }; - jackalope = derive2 { name="jackalope"; version="1.1.1"; sha256="015nkwk1rjz0327gwidyvi6vhl5x8nw87y0pwb3xcvgwbq8rbka2"; depends=[ape R6 Rcpp RcppArmadillo RcppProgress Rhtslib zlibbioc]; }; + jackalope = derive2 { name="jackalope"; version="1.1.2"; sha256="1dk72js7vr98521nscqmajwzp38n52l5gwdzz88fi29wrxvgv4dj"; depends=[ape R6 Rcpp RcppArmadillo RcppProgress Rhtslib zlibbioc]; }; jackknifeKME = derive2 { name="jackknifeKME"; version="1.2"; sha256="0c5shl6s46kz7a623gccqk2plrrf2g29nwr6vbny6009pq3jvzam"; depends=[imputeYn]; }; jackstrap = derive2 { name="jackstrap"; version="0.1.0"; sha256="09y9pgb920lnbzlgm6j188q8lw1air83kx383a2f89zz7hhgg7jr"; depends=[Benchmarking doParallel dplyr fBasics foreach ggplot2 plyr reshape rlang scales tidyr]; }; jackstraw = derive2 { name="jackstraw"; version="1.3"; sha256="02qcaf2p0fyni6n2zhd7vp65kniz74di0pf5jzz79jwj15cfd1b0"; depends=[cluster ClusterR corpcor irlba lfa qvalue rsvd]; }; @@ -10124,7 +10518,7 @@ in with self; { jagsUI = derive2 { name="jagsUI"; version="1.5.1"; sha256="1samj54hyarx9j6k652jl988y3fhxsqg50hfzxdwairg0m2mlgmq"; depends=[coda lattice rjags]; }; james_analysis = derive2 { name="james.analysis"; version="1.0.1"; sha256="1b2n4ds4ivfk564z87s2rxjl9j0y4drd3cmyv8jqpccmdvx1137d"; depends=[naturalsort rjson]; }; janeaustenr = derive2 { name="janeaustenr"; version="0.1.5"; sha256="1wyn4qc28a3sval8shmyi2d7s4nl3jh96s8pzq871brxcmrncbwr"; depends=[]; }; - janitor = derive2 { name="janitor"; version="2.0.1"; sha256="1dy8dlvnxg057qxpd5lk30wcxa15vw95888ccd99sqra789llm3n"; depends=[dplyr lifecycle lubridate magrittr purrr rlang snakecase stringi stringr tidyr tidyselect]; }; + janitor = derive2 { name="janitor"; version="2.1.0"; sha256="09nqm957m2f54y2l30619b58x4i7gxwvr2lwg5kly5xy1ya1a1nn"; depends=[dplyr lifecycle lubridate magrittr purrr rlang snakecase stringi stringr tidyr tidyselect]; }; jaod = derive2 { name="jaod"; version="0.3.0"; sha256="071j3xqk7gzsic1sk8v0pwmqv6pav0nj9vvbskss3l1gczy80dfr"; depends=[crul jsonlite tibble]; }; jarbes = derive2 { name="jarbes"; version="1.7.2"; sha256="0qjnx0m65f6a8r6y5mwplaq518lrsf73k8zbf728v857nbjlhf2l"; depends=[ggExtra ggplot2 gridExtra MASS mcmcplots R2jags rjags]; }; jcext = derive2 { name="jcext"; version="0.1.1"; sha256="02zppiyq3gy551zi1g00gam1w4y1wgzn5zi9wrcz8yw915dla0ix"; depends=[ggplot2 maps RColorBrewer rworldmap sp stringr]; }; @@ -10132,17 +10526,17 @@ in with self; { jcp = derive2 { name="jcp"; version="1.1"; sha256="1b4z1h4ygf39cg870q08ahzi4ccrlrxp6g97y1qiff5pf9xyp1jc"; depends=[]; }; jdx = derive2 { name="jdx"; version="0.1.4"; sha256="0jqf0nkdyv9g4rifzlkls0n64fdcma2yphwl478772jlgfmxm2jb"; depends=[rJava]; }; jeek = derive2 { name="jeek"; version="1.1.1"; sha256="15n0k0i1wwp72g8zqrjmglnckab3p65q3rnpg6d6h8hjcpv82i7g"; depends=[igraph lpSolve pcaPP]; }; - jetpack = derive2 { name="jetpack"; version="0.4.3"; sha256="16l4wkrkf4ihhhpwzd62gvz30n8lxyvail70vmcg41gzdyw76hbl"; depends=[crayon desc docopt packrat remotes]; }; + jetpack = derive2 { name="jetpack"; version="0.5.0"; sha256="17dixhg5nwv2fhp7gvcc927kfxzj07x288g6ywbba1mphk9j5nam"; depends=[desc docopt remotes renv]; }; jetset = derive2 { name="jetset"; version="3.4.0"; sha256="0c99h5npsv2gf5d59s4qhkaqmjhbwa3prcykk24wzhnpfq6y6xhp"; depends=[AnnotationDbi org_Hs_eg_db]; }; - jfa = derive2 { name="jfa"; version="0.4.0"; sha256="17k77jvlvyk5dkf6r1srzggm1gcayrzmds62v99hb43a7iq83i41"; depends=[]; }; + jfa = derive2 { name="jfa"; version="0.5.3"; sha256="00dm5higrxgxjnf7vwghvi8f5y5nblzdpml8zbqpi8n0ys3hiqa2"; depends=[]; }; jiebaR = derive2 { name="jiebaR"; version="0.11"; sha256="08v64xwr9jp4vh88x7y935khh4cmj8rwsjaxfd2c67n0445qppmd"; depends=[jiebaRD Rcpp]; }; jiebaRD = derive2 { name="jiebaRD"; version="0.1"; sha256="1wadpcdca4pm56r8q22y4axmqdbb2dazsh2vlhjy73rpymqfcph4"; depends=[]; }; jipApprox = derive2 { name="jipApprox"; version="0.1.3"; sha256="1dgawgvkpswv1mxjlqz4ip7vy2856fqvs24hkfl338jgap60grhp"; depends=[sampling]; }; jjb = derive2 { name="jjb"; version="0.1.1"; sha256="0y9yvnzg6xngz1fvzl5jm4yb1pg6wrp3id0gysv214wcznf3gna9"; depends=[]; }; - jlctree = derive2 { name="jlctree"; version="0.0.1"; sha256="17n39jc7cwv6hiayy7h1859prdwy2j3pz1vhi6jqnzm4wy6p8a9a"; depends=[lme4 rpart survival]; }; - jmcm = derive2 { name="jmcm"; version="0.2.2"; sha256="0bpvvnb7lgf6lfhhshq31yyvyhacfh208b70brm0cdvizj962mvz"; depends=[Formula lattice Rcpp RcppArmadillo roptim]; }; + jlctree = derive2 { name="jlctree"; version="0.0.2"; sha256="0l8piz0m9iv9lbw35yx1ww0db0pv0qhbvkz4l36fwjsgnjlh8f6a"; depends=[lme4 rpart survival]; }; + jlsm = derive2 { name="jlsm"; version="0.1.0"; sha256="01wmm7555v31kbmy6lcv9j0rr0cav5vsyhl09l7zh0qm6m3ddw7p"; depends=[boot ellipse expm lvm4net MASS Matrix matrixcalc mvtnorm network pROC]; }; + jmcm = derive2 { name="jmcm"; version="0.2.4"; sha256="1dpm94k2s2vx3dvd5rk7xrsq786phl0hq7xi9fjjxbr8qfmxhsck"; depends=[Formula Rcpp RcppArmadillo roptim]; }; jmdem = derive2 { name="jmdem"; version="1.0.1"; sha256="15zrxgd5fgi4wzp4s963pnwj3vkgxs4ygqrcpncy9b6j2cxrivdc"; depends=[statmod VGAM]; }; - jmdl = derive2 { name="jmdl"; version="0.3.0"; sha256="0167yj368lh1n79jwbqs4g2asb67hfmgh97519linmfpx0n6xdpa"; depends=[boot Formula MASS minqa mnormt mvtnorm]; }; jmetrik = derive2 { name="jmetrik"; version="1.1"; sha256="1if1kxx8apgkbxpkjnlj2lpsfnyj2splsg1p3j5vxa7q6wx70f9j"; depends=[]; }; jmotif = derive2 { name="jmotif"; version="1.1.1"; sha256="0b2qllpfgs6q5fwfhxl5b4xdyzbvnja7ld766akf0xxznxvglkrg"; depends=[Rcpp RcppArmadillo]; }; jmuOutlier = derive2 { name="jmuOutlier"; version="2.2"; sha256="1vj9n1hsf780f7l0a22kmi3qm84j4dzjybjkh5zwh6bhwfjnjws3"; depends=[]; }; @@ -10153,52 +10547,55 @@ in with self; { jocre = derive2 { name="jocre"; version="0.3.3"; sha256="1i9n3r16pq6r4sy3fc1rxpil5ws8v2is0xdxafinvwr1hzkv1gz6"; depends=[boot KernSmooth plyr TSP]; }; joinXL = derive2 { name="joinXL"; version="1.0.1"; sha256="1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i"; depends=[data_table openxlsx R_utils rChoiceDialogs Rcpp readxl rJava timeDate timeSeries]; }; joineR = derive2 { name="joineR"; version="1.2.5"; sha256="07rsxqvy62w2z48fkgbhfk5b3q9qwkmz11n8j8qkhipqs0h1zwwq"; depends=[lattice MASS nlme statmod survival]; }; - joineRML = derive2 { name="joineRML"; version="0.4.4"; sha256="1h4js01zp627b5z5c5daz2a2cz38f3m2a1bijcpmbg17qskv6wp0"; depends=[cobs doParallel foreach generics ggplot2 lme4 MASS Matrix mvtnorm nlme randtoolbox Rcpp RcppArmadillo survival tibble]; }; + joineRML = derive2 { name="joineRML"; version="0.4.5"; sha256="0rj6ag1qlz1iyia89pkxw8l2aj8msph17g7qkgc3g99v4i9rj2pp"; depends=[cobs doParallel foreach generics ggplot2 lme4 MASS Matrix mvtnorm nlme randtoolbox Rcpp RcppArmadillo survival tibble]; }; joineRmeta = derive2 { name="joineRmeta"; version="0.1.2"; sha256="0lkj3rry8kvdcl3dxrkvnql8rl3fsgc4lk5qdifhl41aws2q7ccs"; depends=[ggplot2 gridExtra gtools JM joineR lme4 MASS Matrix meta msm statmod survival]; }; - joinet = derive2 { name="joinet"; version="0.0.6"; sha256="0xhn12mkylpn5330qmrlqg29vn89ia03h31472hp9av370mqvzbn"; depends=[cornet glmnet palasso]; }; - joint_Cox = derive2 { name="joint.Cox"; version="3.10"; sha256="08dx2f36drx81sf6fk29zncv9176nh48f7wfihxx28cn49zr5cxa"; depends=[survival]; }; + joinet = derive2 { name="joinet"; version="0.0.7"; sha256="1av1x5iyiffm6llcxi09zb6q8q08cca9wm7ghd9jgxaqzqc72916"; depends=[cornet glmnet palasso]; }; + joint_Cox = derive2 { name="joint.Cox"; version="3.11"; sha256="0h8s96ng7bfc9y26cl6vc0rz7439zw4siimpmmndhyrsdb6d45dz"; depends=[survival]; }; jointDiag = derive2 { name="jointDiag"; version="0.4"; sha256="18x6rxaxhz9hcp6rfmjlanbfsc5q61p6xcxixnc8ayyxbdq7q6rf"; depends=[]; }; jointMeanCov = derive2 { name="jointMeanCov"; version="0.1.0"; sha256="1cai5g63n11dirn9fldzkqxcnkxc20ndr9ygrr9rk0s1qz8x63pb"; depends=[glasso]; }; jointNmix = derive2 { name="jointNmix"; version="1.0"; sha256="0ibh7hqkpzlfk3bk4d2dd64jhr8cvw563k082vwnljiam7k5nj4b"; depends=[]; }; jointPm = derive2 { name="jointPm"; version="2.3.1"; sha256="1c2cn9sqwfyv9ksd63w8rrz0kh18jm2wv2sfdkgncjb7vfs4hbv9"; depends=[]; }; jointseg = derive2 { name="jointseg"; version="1.0.2"; sha256="0zilkxk30w3l9mwikmsgvpy5misjggs98c3bjrjy1pfc4b0is943"; depends=[acnr DNAcopy matrixStats]; }; jomo = derive2 { name="jomo"; version="2.7-2"; sha256="1sbcpacxnxbzwa8rr9x2bq7hh0s3sw6yznr90dkp43n6xk5xaqir"; depends=[lme4 MASS ordinal survival]; }; + jordan = derive2 { name="jordan"; version="1.0-1"; sha256="1d0my0lf8bmlmygz9f23skywzsrhy4xaykyrblbmhb00l0vxpa5s"; depends=[emulator mathjaxr onion]; }; josaplay = derive2 { name="josaplay"; version="0.1.3"; sha256="0q6kjk3mjxwbqvq3zz0ylpi1viznp9pxzngqpjzv5sibv0ndh0lf"; depends=[magrittr utf8]; }; jose = derive2 { name="jose"; version="1.0"; sha256="1yna3x4hi0vn23dqi605nn1y313brwh2wcv527bm3mdbscgsi2jf"; depends=[jsonlite openssl]; }; - journalabbr = derive2 { name="journalabbr"; version="0.2.2"; sha256="0r88cxqd2w1gqc5l5i140sjw56ry554p9n2vjvb3a969dfv510wh"; depends=[dplyr httr purrr rlang shiny stringi stringr tibble usethis]; }; + journalabbr = derive2 { name="journalabbr"; version="0.3.0"; sha256="1q1dmvx4b55bbd2qn920kmi962ignj2h36y7f22bqi5kcgzfgx9d"; depends=[dplyr httr knitr purrr rlang rmarkdown shiny stringi stringr tibble]; }; + joyn = derive2 { name="joyn"; version="0.1.3"; sha256="0f6dgcbh7qvk97vyykyncf0nlspjhyppwywx2hk3h9gzh323c7zq"; depends=[cli data_table glue rlang]; }; jpeg = derive2 { name="jpeg"; version="0.1-8.1"; sha256="1a8mi70x79a691r40yiw684jkg1mr9n8agkxlcksxcnrdybs9c0x"; depends=[]; }; - jpmesh = derive2 { name="jpmesh"; version="2.0.0"; sha256="1fawpcxz31rb3vv9x6dxhcgx1xz758xfsxrc8wa59a6qbrdxqzqh"; depends=[leaflet magrittr memoise miniUI purrr rlang sf shiny tibble units vctrs]; }; + jpmesh = derive2 { name="jpmesh"; version="2.0.1"; sha256="19dyiprsh1ihm7hx5l885p3whj15dlhrljpr77p8bvyimv94j1nl"; depends=[leaflet magrittr memoise miniUI purrr rlang sf shiny tibble units vctrs]; }; jqr = derive2 { name="jqr"; version="1.2.0"; sha256="0c5wbi6hv50q6bvbvnzwwj42lm67isi66iwdha4fc9a6w0c9h5vi"; depends=[lazyeval magrittr]; }; - jquerylib = derive2 { name="jquerylib"; version="0.1.3"; sha256="1s0d6mws13hwkx07jqmry7vp30a05b2p9w7ir68bmkhasidwkzdq"; depends=[htmltools]; }; + jquerylib = derive2 { name="jquerylib"; version="0.1.4"; sha256="04a40v4znpj98j7y6009d74a6g9dchj5rr3p08cgz9p3rlfw3g7h"; depends=[htmltools]; }; jrc = derive2 { name="jrc"; version="0.4.0"; sha256="0jmwjh5zia1q1kma09ngxg2c198a0vy6qhnymcbw8n44lfab25gp"; depends=[httpuv jsonlite mime R_utils R6 stringi stringr]; }; jrich = derive2 { name="jrich"; version="0.60-35"; sha256="1y486bfqmfg3f22wm0lfk3lh20ljgi8qrgn5jji0f417wh48nf0x"; depends=[ape]; }; jrt = derive2 { name="jrt"; version="1.0.1"; sha256="023i0xqz8mhnjnii92vjw64mjnnlf8jaji99i4c2vxcr7m83jm0r"; depends=[directlabels dplyr ggplot2 ggsci irr mirt psych tidyr]; }; - jrvFinance = derive2 { name="jrvFinance"; version="1.4.1"; sha256="1gkivmvc0njm32w7yhbh02h9p212xa3m4cvrwcy7yray8g6phdxp"; depends=[]; }; + jrvFinance = derive2 { name="jrvFinance"; version="1.4.2"; sha256="12x5k3xk4f33jn1czqvh651gf1n255128dihdiqqpj0229gcb138"; depends=[]; }; js = derive2 { name="js"; version="1.2"; sha256="0s5rj845255a4fzv4h76gcnnqyl5cg3c03r2ay3f00jxnxvvigcg"; depends=[V8]; }; jsTree = derive2 { name="jsTree"; version="1.2"; sha256="06mmz55brm6w19vnlk1w8qaz0n3czlyl4fs62nzgdlsdjn8pad1h"; depends=[data_table htmltools htmlwidgets jsonlite]; }; - jsTreeR = derive2 { name="jsTreeR"; version="1.1.0"; sha256="0517jm8ql9ml4n4gdcp0hwzqax7nl0xpwplgi6dbvd6lfbhrqrcf"; depends=[base64enc htmltools htmlwidgets miniUI R_utils rstudioapi shiny shinyAce]; }; + jsTreeR = derive2 { name="jsTreeR"; version="1.2.0"; sha256="1nvz3q1hhnvqarp1i6h94imknr3h8hfy9bh2aa1vsacd3p1qkp76"; depends=[base64enc htmltools htmlwidgets miniUI R_utils rstudioapi shiny shinyAce]; }; jskm = derive2 { name="jskm"; version="0.4.2"; sha256="0yn81fyz8ij2jkys7c5qhfkakqw5nmb458rmd879ns7j7m31nvf0"; depends=[ggplot2 gridExtra scales survey survival]; }; - jsmodule = derive2 { name="jsmodule"; version="1.1.4"; sha256="00jmrsbx52hzfk7nk107lzgxd5d1hl0crvvvibaimm5ldfsz45kn"; depends=[Cairo data_table devEMF DT epiDisplay geepack GGally ggplot2 haven Hmisc jskm jstable labelled MatchIt maxstat pROC purrr RColorBrewer readr readxl rstudioapi see shiny shinycustomloader shinyWidgets survC1 survey survIDINRI survival tableone timeROC]; }; + jsmodule = derive2 { name="jsmodule"; version="1.1.7"; sha256="14hi7n51szbxgxx9bx3z3xaizhbc8iia36r9zh7l0z47f2s1ahqv"; depends=[Cairo data_table devEMF DT epiDisplay geepack GGally ggplot2 ggpubr haven Hmisc jskm jstable labelled MatchIt maxstat pROC purrr RColorBrewer readr readxl rstudioapi see shiny shinycustomloader shinyWidgets survC1 survey survIDINRI survival tableone timeROC]; }; json64 = derive2 { name="json64"; version="0.1.3"; sha256="19q8qgf4wnd3np12ajy180klpjy0g2csw5micwb4sl7qfzl6wc7j"; depends=[jsonlite]; }; jsonify = derive2 { name="jsonify"; version="1.2.1"; sha256="1kpv6whi6bggi0ij7krzfr0fly6c2j9y54fr5ahgcjp36amr34cj"; depends=[rapidjsonr Rcpp]; }; jsonld = derive2 { name="jsonld"; version="2.2"; sha256="0bplz2s97wl9yp383jazykh5647iw6kbr1zanqai2s0sxp1xbwn8"; depends=[curl jsonlite V8]; }; jsonlite = derive2 { name="jsonlite"; version="1.7.2"; sha256="1lhzcpz9clwq04i5m6jzkvw9x03pwlqrixv4l9xzchjr8d84nd86"; depends=[]; }; jsonstat = derive2 { name="jsonstat"; version="0.0.2"; sha256="0p0d3snl1971p5ikrkmwqrjjh4fy0b89qk3rnd1dayfb0r80xnnj"; depends=[cli dplyr jsonlite rlang]; }; + jsontools = derive2 { name="jsontools"; version="0.1.0"; sha256="13i1g8lmzgs7hd0xay4gm8z2myzbjzi73fwp9x4f4f9mywj7zl5s"; depends=[bit64 DBI glue jsonlite magrittr pillar purrr rlang RSQLite tibble tidyselect vctrs withr]; }; jsonvalidate = derive2 { name="jsonvalidate"; version="1.1.0"; sha256="1vxklvkva547mzbgi7hll46sfx274c6j4m70algygphz783x3dsx"; depends=[V8]; }; jsr223 = derive2 { name="jsr223"; version="0.3.4"; sha256="0rir9v0qhnbl2rgkx1qz2ydj68ba9ccbdzsg6y1acczdhpl03j51"; depends=[curl jdx R6 rJava]; }; - jstable = derive2 { name="jstable"; version="1.0.1"; sha256="1p2wkkcsnm143b39q30wl9kjs8k9774szynham33wdd2ckigqk1f"; depends=[car coxme data_table dplyr geepack labelled lme4 magrittr purrr survey survival tableone tibble]; }; + jstable = derive2 { name="jstable"; version="1.0.2"; sha256="04vdvpgpa7fsp89wrw8bcvxan7i15lahcr15y5fg0b8vrn7glzqd"; depends=[car coxme data_table dplyr geepack labelled lme4 magrittr purrr survey survival tableone tibble]; }; jstor = derive2 { name="jstor"; version="0.3.9"; sha256="1rfi02i9j5v2zaz1sganp4rn2bm7yadlq0s4fragyy2jpgs0mnnv"; depends=[cli crayon dplyr furrr magrittr pryr purrr readr rlang stringr tibble tidyr xml2]; }; - jti = derive2 { name="jti"; version="0.6.0"; sha256="1bx241f6bmq1jx1r6a8vkr9yryhhgg83d4ya83z45rjwqdz4y4sd"; depends=[igraph Rcpp RcppArmadillo sparta]; }; - jtools = derive2 { name="jtools"; version="2.1.1"; sha256="06xm6mz4n9c4b62kzqghavj80amivjq41mhmcnz94lp4ci648f9k"; depends=[crayon generics ggplot2 magrittr pander pkgconfig rlang tibble]; }; + jti = derive2 { name="jti"; version="0.7.0"; sha256="0mi4y6fbav80sykn6wnqajgldkd5sdb8gaq9ipijjsv1a9ky5y3m"; depends=[igraph Rcpp RcppArmadillo sparta]; }; + jtools = derive2 { name="jtools"; version="2.1.3"; sha256="1plypcx1pcqndbbcn2xxk346fxzikkd8jfgy5jfrwzp467flyj49"; depends=[crayon generics ggplot2 magrittr pander pkgconfig rlang tibble]; }; jtrans = derive2 { name="jtrans"; version="0.2.1"; sha256="18zggqdjzjhjwmsmdhl6kf35w9rdajpc2nffag4rs6134gn81i3m"; depends=[]; }; jubilee = derive2 { name="jubilee"; version="0.3.3"; sha256="1j2y44pfx9z2k169lh42b4dnfrrnk8jqsjn3wz4l9iscr6r91lx7"; depends=[data_table dplyr readxl xts yaml zoo]; }; - junctions = derive2 { name="junctions"; version="1.1"; sha256="1v5jx4mw6x4q3fivsvidd49b8czzbvv5icj39h6jrpmqvrnc8w32"; depends=[Rcpp]; }; - justifier = derive2 { name="justifier"; version="0.1.0"; sha256="14795pf94bzcnnaf5w0xqzy06vqvs76gdvr1rn4ihqh2az00l6n7"; depends=[data_tree DiagrammeR purrr ufs yum]; }; + juicr = derive2 { name="juicr"; version="0.1"; sha256="0vkbgbagcgaxj6k62b033ik85jnkzvshg8dm9cz7vq4yjqj3icip"; depends=[RCurl XML]; }; + junctions = derive2 { name="junctions"; version="1.1.1"; sha256="0jg9vnj0gwbgdm3xnpzrhri7r15gwfj5vhcrrm59ssq5pil4hag2"; depends=[Rcpp]; }; jvcoords = derive2 { name="jvcoords"; version="1.0.2"; sha256="1mlamzg0qz5l23v2w08imrlbnzc3b3amr6yz5hbaf8vc3k3cff5f"; depends=[]; }; jvnVaR = derive2 { name="jvnVaR"; version="1.0"; sha256="0zh0dc6wqlrxn5r2yv9vkpyfb8xsbdidkjv9g6qr94fyxlbs4yci"; depends=[]; }; kSamples = derive2 { name="kSamples"; version="1.2-9"; sha256="1zs22p68d6320kcylisnk0b5wmpapxkyz15py09czxzw7npw8gms"; depends=[SuppDists]; }; kStatistics = derive2 { name="kStatistics"; version="2.0"; sha256="1mmj8mighaxmh0a2naimyv66iffjfhxh0mzbva7y3cx6bwvsfm83"; depends=[]; }; - kableExtra = derive2 { name="kableExtra"; version="1.3.1"; sha256="1zixccpgy9x95fgzfgxc43pm020c80c21flch71klc3zzzsq53gf"; depends=[digest glue htmltools knitr magrittr rmarkdown rstudioapi rvest scales stringr viridisLite webshot xml2]; }; + kableExtra = derive2 { name="kableExtra"; version="1.3.4"; sha256="1c5vzy95cbz36jwyssr927qicrayifinv861rvnmg4nghb1gl7q9"; depends=[digest glue htmltools knitr magrittr rmarkdown rstudioapi rvest scales stringr svglite viridisLite webshot xml2]; }; kader = derive2 { name="kader"; version="0.0.8"; sha256="15f2swgngw5rdjdsh5kd55wm2nivlfs8pv4mdn0b75qihwgg1zkk"; depends=[]; }; kamila = derive2 { name="kamila"; version="0.1.2"; sha256="01rwalv2qigxl3j3jyhrdbxlarwf0xdc8xa6c42sgcl6qpna5vn7"; depends=[abind gtools KernSmooth plyr Rcpp]; }; kangar00 = derive2 { name="kangar00"; version="1.4"; sha256="0cgyxvgk6bxvh77y9vl0p024dya9ffr9fhmwlcxbysbr4p3kyiaj"; depends=[bigmemory biomaRt CompQuadForm data_table igraph KEGGgraph lattice sqldf]; }; @@ -10209,7 +10606,7 @@ in with self; { kappalab = derive2 { name="kappalab"; version="0.4-7"; sha256="16bwbwwqmq2w7vy8p3wg0y80wfgc8q5l1ly1mqh51xi240z1qmq0"; depends=[kernlab lpSolve quadprog]; }; kaps = derive2 { name="kaps"; version="1.0.2"; sha256="0jg4smbq51v88i3815icb284j97iam09pc52rv3izxa57nv9a0gz"; depends=[coin Formula survival]; }; karaoke = derive2 { name="karaoke"; version="1.0"; sha256="1kx11lijdffhhh8prjgsamshgg2v29b2i129fjqi079waa335352"; depends=[seewave tuneR]; }; - kayadata = derive2 { name="kayadata"; version="0.4.3"; sha256="116bcjfsq9k4x6dy92xbs18rlc09wcwylqyni0dw4c8pww64n937"; depends=[dplyr forcats ggplot2 magrittr scales stringr tidyr]; }; + kayadata = derive2 { name="kayadata"; version="0.5.1"; sha256="0rpqdbk89q8dmpb5x5kiqwkmq9pbgmg8zs0hi46vlhsy38pbxh7m"; depends=[dplyr forcats ggplot2 magrittr scales stringr tidyr]; }; kazaam = derive2 { name="kazaam"; version="0.1-0"; sha256="0j7vysnmiv9sggcxdn3nrgfvyl52pza4kkjnsa0xlb3fzq9qpwlz"; depends=[pbdMPI]; }; kcirt = derive2 { name="kcirt"; version="0.6.0"; sha256="1gm3c89i5dq7lj8khc12v30j1c0l1gwb4kv24cyy1yw6wg40sjig"; depends=[corpcor mvtnorm snowfall]; }; kcopula = derive2 { name="kcopula"; version="0.1.0"; sha256="07ddrq4lxp8i6n7c7ac7x9mdg9gfmlh7bv3n34qalwv0a6fa061w"; depends=[pracma]; }; @@ -10220,7 +10617,6 @@ in with self; { kdetrees = derive2 { name="kdetrees"; version="0.1.5"; sha256="1plf2yp2vl3r5znp5j92l6hx1kgj0pzs7ffqgvz2nap5nf1c6rdg"; depends=[ape distory ggplot2]; }; kdevine = derive2 { name="kdevine"; version="0.4.2"; sha256="15hw27y4rlifz3kyirm7yacca38xqdwr42k21gg67dhmbdplbnz0"; depends=[cctools doParallel foreach kdecopula KernSmooth MASS qrng Rcpp VineCopula]; }; kdist = derive2 { name="kdist"; version="0.2"; sha256="18q7njvsb9sbm412c6ms4b4nxg768z9qahws5rnin06gvb25nfcx"; depends=[]; }; - kdtools = derive2 { name="kdtools"; version="0.4.2"; sha256="0mgfjk7v7q0rpfmy4ql0xkrlfnw91ps2prdr30ilq6yp3bv88ix5"; depends=[BH Rcpp strider]; }; kedd = derive2 { name="kedd"; version="1.0.3"; sha256="17rwz3yia95xccbxwn43wr6c9b3062094yfahnnnk3wfijyhlxiq"; depends=[]; }; keep = derive2 { name="keep"; version="1.0"; sha256="12803hhrs9v94rv6qaihk1f1ls7lx4cy2pa30v4p1r2z9afx9bjf"; depends=[]; }; kehra = derive2 { name="kehra"; version="0.1"; sha256="1cc0bmbg0dncay50ap7cs2516qngzz3ddaab0jk5r6lwfq87h8qx"; depends=[Hmisc raster reshape2 sp stringr xts zoo]; }; @@ -10228,50 +10624,53 @@ in with self; { kendallRandomWalks = derive2 { name="kendallRandomWalks"; version="0.9.4"; sha256="1mfqblvsn9p6gdcnbypfpzk0xzn6bz1ajbrkz2dap5w35dia3kxa"; depends=[actuar dplyr ggplot2 tibble]; }; kequate = derive2 { name="kequate"; version="1.6.3"; sha256="1ii3wlypm2qqkfxr3z1sdnmgc43h2zzlw6v4h2xxjdlznzxkp3mr"; depends=[equateIRT ltm mirt]; }; kerTests = derive2 { name="kerTests"; version="0.1.2"; sha256="0gn0wjybaixwv8fkpn6wqz0cywzyscvv2dgnnl3idai1zr1fzjn1"; depends=[]; }; - keras = derive2 { name="keras"; version="2.3.0.0"; sha256="0byzg6qpcfj852qlbav8cwhrqvkpkg0zig9brhw2sibljwy8x5ik"; depends=[generics magrittr R6 reticulate tensorflow tfruns zeallot]; }; + keras = derive2 { name="keras"; version="2.4.0"; sha256="00bw5f5d81md8db1k6bf2a91by4k25xvlwxiwv188y4vw3bfc7md"; depends=[generics magrittr R6 reticulate rlang tensorflow tfruns zeallot]; }; kerasR = derive2 { name="kerasR"; version="0.6.1"; sha256="1yi7710vgcwz0jhishbga41sc6qyk83a0avmq01dvqjsz3cdfsfc"; depends=[reticulate]; }; kerastuneR = derive2 { name="kerastuneR"; version="0.1.0.3"; sha256="1lky84mgppsbn2wn0livx2j18x5vg92mskhb3pyf4ig9qyfxgjkk"; depends=[crayon data_table dplyr echarts4r keras magick plotly reticulate rjson RJSONIO rstudioapi tensorflow tidyjson]; }; kerdiest = derive2 { name="kerdiest"; version="1.2"; sha256="16xj2br520ls8vw5qksxq9hqlpxlwmxccfk5balwgk5n2yhjs6r3"; depends=[chron date evir]; }; - kergp = derive2 { name="kergp"; version="0.5.1"; sha256="16zb7gsbp3bg4kpn7lszw8rn24i40f6jmxcf751vca1f7pfn38pj"; depends=[doFuture doParallel lattice MASS nloptr numDeriv Rcpp testthat]; }; + kergp = derive2 { name="kergp"; version="0.5.5"; sha256="0qkjjrjgny8jvklgbddx0n1fq2bwr434shdn7xzdp0krxxnh7h64"; depends=[doFuture doParallel lattice MASS nloptr numDeriv Rcpp testthat]; }; kerndwd = derive2 { name="kerndwd"; version="2.0.3"; sha256="0lvm007wzhyagyafmq47819hn66riwdcpymn56clc1sgch9i933m"; depends=[]; }; kernelFactory = derive2 { name="kernelFactory"; version="0.3.0"; sha256="001kw9k3ivd4drd4mwqapkkk3f4jgljiaprhg2630hmll064s89j"; depends=[AUC genalg kernlab randomForest]; }; kernelPSI = derive2 { name="kernelPSI"; version="1.1.1"; sha256="1gnp3ixqmijy6xanlc4l8255biwxmlfyhd3y68arry9rzfjkmxpz"; depends=[CompQuadForm kernlab lmtest pracma Rcpp RcppArmadillo]; }; - kernelTDA = derive2 { name="kernelTDA"; version="1.0.0"; sha256="0nzb2z10c3pqj8p47w663mrnmk3g8x61zz99ka8fwcspw1wq3g8m"; depends=[BH mvtnorm Rcpp RcppEigen Rdpack]; }; + kernelPhil = derive2 { name="kernelPhil"; version="0.1"; sha256="0pzsknb0ibm3v0ibfaklb4g2mx7zrva4m29356cirwd29nmd8bqw"; depends=[benchmarkme directlabels dplyr ggplot2 gridExtra Hmisc pbapply reshape2 rgdal wordspace]; }; kernelboot = derive2 { name="kernelboot"; version="0.1.7"; sha256="1465n9fasyxwm4xx9vajaf5n355z2qdkfzhpp3a6mkv58pydbjss"; depends=[future future_apply Rcpp]; }; kernhaz = derive2 { name="kernhaz"; version="0.1.0"; sha256="1cxwjnfyhxfjdbhs21airycs704jic21pdpsbxsx37wkl11cxpai"; depends=[doParallel foreach GA rgl]; }; kernlab = derive2 { name="kernlab"; version="0.9-29"; sha256="0vqhndl4zm7pvkfvq0f6i9cbrm7pij6kmdp7d7w39pa100x6knn3"; depends=[]; }; kernplus = derive2 { name="kernplus"; version="0.1.2"; sha256="0z5zpj89nw7cdphg6frmjwqjxsl6g95xsa8zgsxmw2q75wwj1saz"; depends=[circular KernSmooth mixtools]; }; kernscr = derive2 { name="kernscr"; version="1.0.5"; sha256="1kcj710q8jbc34g6fcv2nk07hpsb81mfx8hvivgxq8x58028gjzs"; depends=[MASS mvtnorm]; }; - keyATM = derive2 { name="keyATM"; version="0.3.1"; sha256="1bi7hs1d70y5xpf3rh3g0vnn558y6fvxknyl491h737ps87rd77i"; depends=[dplyr fastmap ggplot2 ggrepel magrittr Matrix purrr quanteda Rcpp RcppEigen RcppProgress rlang stringr tibble tidyr]; }; - keyToEnglish = derive2 { name="keyToEnglish"; version="0.2.0"; sha256="169iclygyk3qxzl8gii5lndwfzz8a7fir2kf7vrasxbknvkvlfij"; depends=[jsonlite openssl stringr]; }; + keyATM = derive2 { name="keyATM"; version="0.4.0"; sha256="1505r5753fv2xifcm960mzis0w8z4ax7rdbvvcy8bqckzi873m7n"; depends=[dplyr fastmap future_apply ggplot2 ggrepel magrittr MASS Matrix matrixNormal pgdraw purrr quanteda Rcpp RcppEigen RcppProgress rlang stringr tibble tidyr]; }; + keyToEnglish = derive2 { name="keyToEnglish"; version="0.2.1"; sha256="1wzn93gp1v6y8qh9kypydqadnf6fc7xzjili77b7j402hvb0a8zg"; depends=[jsonlite openssl stringr]; }; keyholder = derive2 { name="keyholder"; version="0.1.5"; sha256="0sr0rcchvwflqf2xj9j8j35ng52ichgvp1ix57v4ah91dlpj9i5s"; depends=[dplyr rlang tibble]; }; keyplayer = derive2 { name="keyplayer"; version="1.0.3"; sha256="0j4n46r9ivkbzqz8g22dq2bpmx7bs05yb5qp27p9jnfh5x19v2ds"; depends=[igraph matpow sna]; }; keypress = derive2 { name="keypress"; version="1.2.0"; sha256="19l33519f726i3q20y34v1aavrn4fpj3zn5caij3l9q2asw2kqk2"; depends=[]; }; - keyring = derive2 { name="keyring"; version="1.1.0"; sha256="1hpfd4hbx43i39l995rg86kfxi7wlyla1gv8mwcdr4xx7z122zzq"; depends=[assertthat filelock getPass openssl R6 rappdirs sodium yaml]; }; + keyring = derive2 { name="keyring"; version="1.2.0"; sha256="1rqz29ycsmfqixhnzhhfd89j9ivnmp7x2z3vxdla622zmakbcy4c"; depends=[askpass assertthat filelock openssl R6 rappdirs sodium yaml]; }; keyringr = derive2 { name="keyringr"; version="0.4.0"; sha256="04f0z6mqj75l5qhiab0zvjsvz3jz1bp6dfazkpgihjmls5k11dnh"; depends=[stringr]; }; keys = derive2 { name="keys"; version="0.1.0"; sha256="0r4qrd9xbc1pwl6dqr89inrlwwfhayymga1mf1nwb47203fbz02l"; depends=[htmltools jsonlite shiny]; }; kfda = derive2 { name="kfda"; version="1.0.0"; sha256="0861hzry55gj8ykdd8cwil1wb7234pkmipp4v1749fpmzggq1xgi"; depends=[kernlab MASS]; }; kfigr = derive2 { name="kfigr"; version="1.2"; sha256="0hmfh4a95883p1a63lnziw8l9f2g0fn0xzxzh36x9qd9nm7ypmkw"; depends=[knitr]; }; kgc = derive2 { name="kgc"; version="1.0.0.2"; sha256="14zbcimnglh5jj07dcaxp1dfjaz8syswy29nf8z39qmslv1hg9kk"; depends=[plyr shiny shinythemes]; }; + kgrams = derive2 { name="kgrams"; version="0.1.0"; sha256="1p4nbpxv8pklk6i164f6psdldqv8dw6840jjhmapmlw6gqjqy1fh"; depends=[Rcpp RcppProgress Rdpack rlang]; }; kgschart = derive2 { name="kgschart"; version="1.3.5"; sha256="1gdsrmnv8z99cldvig7grlq8gsbv3wpx7zdamw85lz563n4ln94d"; depends=[abind deepnet ggplot2 gridExtra magrittr matrixStats nnet png shiny stringr]; }; - khroma = derive2 { name="khroma"; version="1.4.0"; sha256="116c39f3vf9pb018wavdc8n1hcysmgbc0w058fv11mzlb4g68xrp"; depends=[ggplot2 scales spacesXYZ]; }; - kibior = derive2 { name="kibior"; version="0.1.0"; sha256="06ff9iqhvl7wvxjy45s526dr30wq0n6jh417073gj94zi0wmv7n4"; depends=[Biostrings data_table dplyr elastic jsonlite magrittr purrr R6 rio Rsamtools rtracklayer stringr tibble tidyr]; }; + khroma = derive2 { name="khroma"; version="1.5.0"; sha256="05qqhj2mqlnidx1l77a806v1ywrb43jnc8p4vz20agjx3k2n9k1i"; depends=[ggplot2 scales spacesXYZ]; }; + kibior = derive2 { name="kibior"; version="0.1.1"; sha256="1acrdlqbklhhd69i1gija8r3nsdgcnfvk5ngz7b2ndy2f58w5ynf"; depends=[Biostrings data_table dplyr elastic jsonlite magrittr purrr R6 rio Rsamtools rtracklayer stringr tibble tidyr]; }; kidney_epi = derive2 { name="kidney.epi"; version="1.2.0"; sha256="1hd6w7kxim5slmmqalf5sfjg8jcvhyzn5g4gf6h0lmaprsfszhja"; depends=[]; }; - kim = derive2 { name="kim"; version="0.2.20"; sha256="15z8vwrj8rvq0l2ycpxazns3w3mxn0x7458w9d20fgfj5898wzdx"; depends=[boot car data_table devtools dplyr effsize ggplot2 ggridges lm_beta mediation moments paran rstudioapi weights WRS2]; }; + kim = derive2 { name="kim"; version="0.3.13"; sha256="1v09n3rcxcvs1sn492wqxwlvp935vc9rkymbp2rgwqnf8sy3nl23"; depends=[data_table remotes]; }; kimisc = derive2 { name="kimisc"; version="0.4"; sha256="0nbjspbq9akhmamfdn192p5b6ki7xqhp422ih6v77xsnrhl5m24z"; depends=[memoise plyr pryr]; }; kin_cohort = derive2 { name="kin.cohort"; version="0.7"; sha256="0wijsjz0piz5j9rm2nr3d5dfpiyba740mbfbkmfll9pz72s58wz8"; depends=[survival]; }; + kindisperse = derive2 { name="kindisperse"; version="0.9.2"; sha256="1cbpin3h5mipvz028mw6qh0zd33802vk5kc7d13qm541akk9h8i2"; depends=[dplyr fitdistrplus ggplot2 ggrepel here LaplacesDemon magrittr plotly readr rlang shiny shinythemes stringr tibble tidyselect]; }; kineticF = derive2 { name="kineticF"; version="1.0"; sha256="1k54zikgva9fw9c4vhkc9b0kv8sq5pmc962s8wxr6qv97liv9p46"; depends=[circular lqmm MASS plotrix sp splancs]; }; kinship2 = derive2 { name="kinship2"; version="1.8.5"; sha256="1mhnb805l1q5n4nf1gqb0jw8nbpg1yc0l1c61k3zr7mdrjv2dhkj"; depends=[Matrix quadprog]; }; kirby21_base = derive2 { name="kirby21.base"; version="1.7.3"; sha256="1ymhldippxybj6lkh7ibpix68285rdsyw28krjndyzvx39jl78gj"; depends=[git2r]; }; kirby21_fmri = derive2 { name="kirby21.fmri"; version="1.7.0"; sha256="1z2l6bn53mwkll9ki4169lqlz6wcfp29xzdrqyw606j2xrs4wc22"; depends=[kirby21_base]; }; kirby21_t1 = derive2 { name="kirby21.t1"; version="1.7.0"; sha256="0bv8rrk9jh02h3gill1g2w246j4zv98cjchz7i2c092lvqps8szs"; depends=[kirby21_base]; }; kissmig = derive2 { name="kissmig"; version="1.0-3"; sha256="1pi1x3gdbqrhr1km1hqj15k8wyrgs697fnxgjgxga1irbn8bi482"; depends=[raster]; }; - kit = derive2 { name="kit"; version="0.0.5"; sha256="0zwa7fk9v3gxl91hqf6jb85pcbf83mjbnzv80wlgwq13mwa9ifax"; depends=[]; }; + kit = derive2 { name="kit"; version="0.0.7"; sha256="127jl30hxfrd12b6f9n7phr21jk6id0akvdkd4s2p9dpywxqiy5p"; depends=[]; }; kitagawa = derive2 { name="kitagawa"; version="3.1.0"; sha256="190xi88zc3vybpyawayh8m78sgcn951n3axmc2fc67sic458r02s"; depends=[Bessel kelvin psd]; }; + kittyR = derive2 { name="kittyR"; version="1.1.0"; sha256="196x631j2zp6892wj609yl16q25zmric8lf8mc760sra4nrps27l"; depends=[beepr dplyr imager magrittr purrr rvest stringr tibble]; }; kiwisR = derive2 { name="kiwisR"; version="0.2.0"; sha256="14fzf72swy221jcbiplss9dh7g03idrpbbyvbxp4bcqpxwr6hbsa"; depends=[dplyr httr jsonlite lubridate purrr tibble]; }; kknn = derive2 { name="kknn"; version="1.3.1"; sha256="1nzkg3dxaiqp87p56wm895qx5xn86hv5hjr73qvl1yiaxiq0x112"; depends=[igraph Matrix]; }; klaR = derive2 { name="klaR"; version="0.6-15"; sha256="1bhgkq6spjawy5lsh663rnby4fzrx4k2qwqp4ci4p9pq8g35pzjv"; depends=[combinat MASS questionr]; }; - klassR = derive2 { name="klassR"; version="0.1.3"; sha256="0njsmmcrx57v084kcgm1x99cqzzjpjpzli1b0vsv02hmv7n3rxn4"; depends=[httr jsonlite tm]; }; + klassR = derive2 { name="klassR"; version="0.1.5"; sha256="00cm71jcshyndvl1dr59cc01pryjymj6a8lprg8r2i8vpijjb96l"; depends=[httr jsonlite tm]; }; klausuR = derive2 { name="klausuR"; version="0.12-10"; sha256="12fjs4dnwaki8sz718xgsg8qrqhsgf87cs0bylf0p3f5k8hrmk4b"; depends=[polycor psychometric xtable]; }; klexdatr = derive2 { name="klexdatr"; version="0.1.1"; sha256="0y951lsafh80x7ya17jw8hmhrcxvqh4qwzik7w42bvams3sbf75k"; depends=[]; }; klic = derive2 { name="klic"; version="1.0.4"; sha256="1ggsdq8xcg6hi12rq356myhngx3j475gpwlvpynm1581r4z0lkbk"; depends=[cluster coca Matrix pheatmap RColorBrewer]; }; @@ -10280,17 +10679,16 @@ in with self; { km_ci = derive2 { name="km.ci"; version="0.5-2"; sha256="1l6kw8jppaa1802yc5pbfwwgac56nhwc9p076ivylhms4w7cdf8v"; depends=[survival]; }; kmc = derive2 { name="kmc"; version="0.2-4"; sha256="0y8bdgdxsz53fiqc2yr39agndxs4zxj7mmplj273map9k0slnnqk"; depends=[emplik Rcpp rootSolve]; }; kmcudaR = derive2 { name="kmcudaR"; version="1.1.0"; sha256="16dkv9ag5375zc23nqakbg7v6knxvh1pips9rjsls0d7rw2bg1bs"; depends=[Rcpp RcppEigen]; }; - kmeRs = derive2 { name="kmeRs"; version="1.1.0"; sha256="1wafa9wgqlwrk6jwmbn34n3rmvbc9s6s235z8mscbqgw67snwcq6"; depends=[Biostrings rDNAse tcR]; }; - kmed = derive2 { name="kmed"; version="0.3.0"; sha256="0d32pcczkyx3dw4bnqrzd36lvw5xf2ilr8f1h32z3rq092m53mrx"; depends=[ggplot2]; }; + kmed = derive2 { name="kmed"; version="0.4.0"; sha256="0lm22wrvv8pfndy1ii1wp54makfp37hism3z9hp700zhpml4nnch"; depends=[ggplot2]; }; kmer = derive2 { name="kmer"; version="1.1.2"; sha256="0jimn9r0abglwxdl1zqz0lxa99cmj6haydkxjzqfbpx9by80wnww"; depends=[openssl phylogram Rcpp]; }; kmi = derive2 { name="kmi"; version="0.5.5"; sha256="1j6fyi004fl97l569sn05pb7bmc2jx5hi0blfd896qi309s9qkd8"; depends=[mitools survival]; }; kml = derive2 { name="kml"; version="2.4.1"; sha256="1my9gcripiqc6iphycjr3srj8qxy05yvd0648vblygrx2qym5hy2"; depends=[clv longitudinalData]; }; kml3d = derive2 { name="kml3d"; version="2.4.2"; sha256="1a3hqyhrsh12l1j1xlz4zy88impw3biz6w2qc80r11m549h0m6s9"; depends=[clv kml longitudinalData misc3d rgl]; }; kmlShape = derive2 { name="kmlShape"; version="0.9.5"; sha256="1p35ihjq84jnzq78yksdblc0c1qcn13f8n4khddsxcqvk3a44xb1"; depends=[class kml lattice longitudinalData]; }; - kmlcov = derive2 { name="kmlcov"; version="1.0.1"; sha256="09s9ganfsnwp22msha78g6pjr45ppyfyqjf6ci64w3w15q5qlcd9"; depends=[]; }; kmodR = derive2 { name="kmodR"; version="0.1.0"; sha256="1y1pqrrralklflyb1dw8bslfcyqrw8ryijfbhkwba7ykpxcf9fda"; depends=[]; }; knitLatex = derive2 { name="knitLatex"; version="0.9.0"; sha256="1igacc2sx8897wmnhh8kngd0fq6zqbi30chy5c8jw60zc38mi3wi"; depends=[knitr]; }; - knitr = derive2 { name="knitr"; version="1.30"; sha256="0gn9qwc5762a6j0iywfwhalni52g228dcy4bl4di6d52cqsv3ars"; depends=[evaluate highr markdown stringr xfun yaml]; }; + knitcitations = derive2 { name="knitcitations"; version="1.0.12"; sha256="1c7pl8jh61pv0brqanmyfy6s0ipxn312b2hjypcsjaph6b8mhj2q"; depends=[digest httr RefManageR]; }; + knitr = derive2 { name="knitr"; version="1.33"; sha256="0289dj7h4wppn4xc4ids7xlrfb46gzd1n9r2wpmfc3c818mk70rg"; depends=[evaluate highr markdown stringr xfun yaml]; }; knitrBootstrap = derive2 { name="knitrBootstrap"; version="1.0.2"; sha256="1aj60j7f0gcs120fdrnfbnb7vk7lfn1phil0mghg6a5zldz4cqs3"; depends=[knitr markdown rmarkdown]; }; knitrProgressBar = derive2 { name="knitrProgressBar"; version="1.1.0"; sha256="18v5jrscfrin3mcs63bpj0q1drxk3zkhlbw93sqh0qrq04d4x02v"; depends=[R_oo R6]; }; knitrdata = derive2 { name="knitrdata"; version="0.6.1"; sha256="1am79r4rkrw7vjmyzc0cq4p52l2ypdw99rfhrvdsaq11yllx08mx"; depends=[knitr xfun]; }; @@ -10301,15 +10699,14 @@ in with self; { knor = derive2 { name="knor"; version="0.0-7"; sha256="1xxv210sjj9w06pf36q7haz9fkqdc17jyqdsiqsxj3q8zj585qfc"; depends=[Rcpp]; }; knotR = derive2 { name="knotR"; version="1.0-2"; sha256="0kd1b9wibpwyaanz9ny61qgfvcg4d3rzpy05sfshlpp0b1y8d3xj"; depends=[]; }; kntnr = derive2 { name="kntnr"; version="0.4.4"; sha256="1af5qhj82dixf1qcbz3sfj52pzgy8gnafzifwxnhrp7vpn4rnv6m"; depends=[base64enc dplyr httr jsonlite lubridate purrr rlang rstudioapi stringr tibble tidyr]; }; - koRpus = derive2 { name="koRpus"; version="0.13-4"; sha256="1bg8q67hp3rs9373zmw0jxg9vclfdj0z7cnks6g8fwdnrimk6p6w"; depends=[data_table Matrix sylly]; }; + koRpus = derive2 { name="koRpus"; version="0.13-5"; sha256="176npnsp07crbv22yb795dr6zl2h927sgfr27aks1n9hkbhznayk"; depends=[data_table Matrix sylly]; }; koRpus_lang_en = derive2 { name="koRpus.lang.en"; version="0.1-4"; sha256="1faj065wjj7a68i57y7zmrrj4ckp01gvq8qknf6a56idi8kzr732"; depends=[koRpus sylly_en]; }; - kofdata = derive2 { name="kofdata"; version="0.1.4"; sha256="1vqixanprlfmqjcj3543m4mhq37imd9qnnif2mbh6wr1rcrs1zs9"; depends=[httr jsonlite xts zoo]; }; + kofdata = derive2 { name="kofdata"; version="0.1.5"; sha256="0l0fiamhx4qqqpfafjf8ksnj37q2ynj45b025vvy4q6y286i0w7j"; depends=[httr jsonlite xts zoo]; }; kofnGA = derive2 { name="kofnGA"; version="1.3"; sha256="0w0881ydnqdah04sifi25ypzxdwnsiqxfq1xam4yhr670bdak1vm"; depends=[bigmemory]; }; kohonen = derive2 { name="kohonen"; version="3.0.10"; sha256="1ck7j13x701g67bx81x7plszz804jfhl1yg42krcj9x88vm5cscr"; depends=[Rcpp]; }; - kokudosuuchi = derive2 { name="kokudosuuchi"; version="0.4.2"; sha256="1nwydfyr9waa5h8h8nrmwxy0jx7i4893g5khfv6b4g09z6g5cyly"; depends=[curl dplyr glue httr purrr rlang sf shiny stringr tibble xml2]; }; + kokudosuuchi = derive2 { name="kokudosuuchi"; version="1.0.0"; sha256="0h4r7bd9989pahx34lc2i5h1f8nipir941l7sahhgz28lskfkc3h"; depends=[glue rlang sf stringr tibble]; }; kolmim = derive2 { name="kolmim"; version="1.0"; sha256="0g1i0cazi4nhfwdd3ywqrar1sn7bw77w38qjii045w5vqg05srkp"; depends=[]; }; - komaletter = derive2 { name="komaletter"; version="0.4"; sha256="0l9xd28vsy5xs27s8mxvj24fpx6s0c36cka9z3x09rdzdp6gwqn8"; depends=[rmarkdown]; }; - konfound = derive2 { name="konfound"; version="0.3.0"; sha256="0ggckxmq63wl1578mv090bdzzbbnhl3dvffrj8xz2p0852rcb6pb"; depends=[broom broom_mixed crayon dplyr ggplot2 mice purrr rlang tibble tidyr]; }; + komaletter = derive2 { name="komaletter"; version="0.4.2"; sha256="1cll8cb69gyxl5mg04jibxf7szh38xrqksjkcswbgjcqidp6yxi2"; depends=[rmarkdown]; }; kosel = derive2 { name="kosel"; version="0.0.1"; sha256="1gdsy4i58byqxddpsm5nk1r3hlgik5gs2b8jqcm8n1r4ib6pg0ay"; depends=[glmnet ordinalNet]; }; kpcalg = derive2 { name="kpcalg"; version="1.0.1"; sha256="1gd5bisyfwb12l9jmwhi2arlxrabc01vgv4m1qqs23vybsd6yh52"; depends=[energy graph kernlab mgcv pcalg RSpectra]; }; kpeaks = derive2 { name="kpeaks"; version="1.1.0"; sha256="057xfqn08lqczgrj1r63d7vbncg24x9va9lnk8c47nwzl1x8aphd"; depends=[]; }; @@ -10318,9 +10715,9 @@ in with self; { kriens = derive2 { name="kriens"; version="0.1"; sha256="1qi65k9fsbbkbw0w40rv60p5ygrvr10rmlyxdaqa5bdpcmrbly5z"; depends=[]; }; krige = derive2 { name="krige"; version="0.6.1"; sha256="0xcx7glarqjb25bchs3wflw5lyy9xrbksirrdm35vdsxgif62ydz"; depends=[coda Rcpp]; }; kriging = derive2 { name="kriging"; version="1.1"; sha256="04bxr34grf2nlrwvgrlh84pz7yi0r8y7dc2wk0v5h5z6yf5a085w"; depends=[]; }; - krippendorffsalpha = derive2 { name="krippendorffsalpha"; version="1.0"; sha256="137x6y7ks9pan2zwqcpyap5f7d1pwa580aq29cynfimxacmgb5si"; depends=[]; }; + krippendorffsalpha = derive2 { name="krippendorffsalpha"; version="1.1"; sha256="0d06rwg3ab383x4194n5s50n5nc6ns16jhcfn8kzzcj7j9swz5kl"; depends=[]; }; krm = derive2 { name="krm"; version="2020.5-20"; sha256="1b6477cjv5k30djvrlbmwn91ghgwk24cfd58cb0q80xqhgiqvrzb"; depends=[kyotil]; }; - ks = derive2 { name="ks"; version="1.11.7"; sha256="1f6jvxy0hmngyvnvrknzbmhl42njk0vqyycvydm4qnp8cqirqvba"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm]; }; + ks = derive2 { name="ks"; version="1.12.0"; sha256="1sff6rlpq64lqyvwgral9zbcan30wpgmfb26hw9y6wzypd9gxbz6"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm plot3D]; }; ksNN = derive2 { name="ksNN"; version="0.1.2"; sha256="06x471hck95xqy7rbh53ibhzh6kfjra7y9ipqdj2rqdkmfdj72q8"; depends=[Rcpp]; }; kselection = derive2 { name="kselection"; version="0.2.0"; sha256="1arg96r2pldvb89rfqnfpjxwksyac2mhmbimbkwzm7wrnbnrcn5d"; depends=[]; }; ksharp = derive2 { name="ksharp"; version="0.1.0.1"; sha256="1dnkj838y8c1b53mlljhjqs3nd864i9xcqsv9n4fw28b4br9m570"; depends=[]; }; @@ -10330,10 +10727,9 @@ in with self; { kstMatrix = derive2 { name="kstMatrix"; version="0.1-2"; sha256="1z5gs0x80dq549mba2sy1nfhsphrpkrydalj2jiwqb7fmwqknm3r"; depends=[]; }; ktaucenters = derive2 { name="ktaucenters"; version="0.1.0"; sha256="15ddjr4c90b5hc4977gk35zb2kswrcvai3xighy7qj6g9lgiszgf"; depends=[dbscan dplyr GSE MASS]; }; ktsolve = derive2 { name="ktsolve"; version="1.3"; sha256="0brxqb60m1lyqhsmds1c3c6cmbcxlzk2nwvi0fhkc8ziwzlfmd09"; depends=[BB nleqslv]; }; - kubik = derive2 { name="kubik"; version="0.2.0"; sha256="1f5v88pfm9szkshbnkkd0pdphqwrbblfmmys7j8k60y919lwgv0z"; depends=[]; }; + kubik = derive2 { name="kubik"; version="0.3.0"; sha256="1m1ll3bb77h1x9m5q784m3dw061ysjmfb62q4svc1nvassbw44vf"; depends=[]; }; kuiper_2samp = derive2 { name="kuiper.2samp"; version="1.0"; sha256="0gcgayh7qdic9zprdvs6r8qvpqs467zrm0qzp2acb7alcp01jhpi"; depends=[]; }; kulife = derive2 { name="kulife"; version="0.1-14"; sha256="070ayy6fr9nsncjjljikn2i5sp2cx3xjjqyc64y2992yx74jgvvd"; depends=[]; }; - kuniezu = derive2 { name="kuniezu"; version="0.1.1"; sha256="0aqfr4510syzc35ch7wgxrs0ibmqiyn9mhimi5gwshds7dirml3n"; depends=[dplyr ggplot2 leaflet magrittr parzer purrr sf stringr]; }; kutils = derive2 { name="kutils"; version="1.70"; sha256="06jk66wbq3jmdf2jdhqns6r3yk36l2x7c907x977zv80sqxa1l37"; depends=[foreign openxlsx plyr RUnit xtable]; }; kvh = derive2 { name="kvh"; version="1.4.1"; sha256="0hnqlybphx8qnx98ynykxpz4ys4prp9zbmkak02qlvmnxwc2cqg0"; depends=[Rcpp]; }; kwb_hantush = derive2 { name="kwb.hantush"; version="0.3.0"; sha256="1rlm7i95yw66asgkag93phig2y9lic4xl2fv3cbnr3v751f6a59m"; depends=[hydroGOF lattice]; }; @@ -10345,6 +10741,7 @@ in with self; { l0ara = derive2 { name="l0ara"; version="0.1.6"; sha256="1cv48rbq080z7zx32hmlkpq7mi5axr09a1hyv3knl1vb9gql4qjq"; depends=[Rcpp RcppArmadillo]; }; l1ball = derive2 { name="l1ball"; version="0.1.0"; sha256="1ryq1vfkwg465kgxbb2wf8df7qa85yr8lbx3a58j0az8dqkyzqix"; depends=[VGAM]; }; l1kdeconv = derive2 { name="l1kdeconv"; version="1.2.0"; sha256="1mk92sz9nsmxsn7yplhfcz07k022lrr61114ckrmm0x8hfd89zj8"; depends=[ggplot2 mixtools]; }; + l1spectral = derive2 { name="l1spectral"; version="0.99.2"; sha256="1a3hv9m32mb83nmv0q68xnawx923i941l4sqzsxr6lk6rri7fb4a"; depends=[cvTools glmnet igraph Matrix NMI Rcpp RcppArmadillo]; }; l2boost = derive2 { name="l2boost"; version="1.0.1"; sha256="0f2gapzpvjnr8n1jgn60jpmcas4s8nk2q8q4k5v4ypwvpfqp7kk1"; depends=[MASS]; }; laGP = derive2 { name="laGP"; version="1.5-5"; sha256="1a269cy9qmjldb5hv1nl9naq1rr35z37xjpp4kannj6p560fm476"; depends=[tgp]; }; labdsv = derive2 { name="labdsv"; version="2.0-1"; sha256="099rzl9hy70rmb5fg0vx26mlhr4ra2s0hl3jgv22s8hqpvlmakas"; depends=[cluster MASS mgcv Rtsne]; }; @@ -10352,7 +10749,7 @@ in with self; { labelVector = derive2 { name="labelVector"; version="0.1.1"; sha256="156066jbsmqal1q4xwwkyrqfzq0as6r2add0x240y21zak6i8x9q"; depends=[]; }; labeledLoop = derive2 { name="labeledLoop"; version="0.1"; sha256="0gq392h0sab8k7k8bzx6m7z5xpdsflldhwbpdf92zbmkbzxsz00m"; depends=[]; }; labeling = derive2 { name="labeling"; version="0.4.2"; sha256="0rfikd9gy70b8qz87q9axcwv8nmn9mbxfdwypxi0sghpfs9df8p0"; depends=[]; }; - labelled = derive2 { name="labelled"; version="2.7.0"; sha256="1nsb0mh0jg7gggc41b6v55nmfq07g0qn9fy55x4jws5dscs6pdmi"; depends=[dplyr haven lifecycle pillar rlang tidyr vctrs]; }; + labelled = derive2 { name="labelled"; version="2.8.0"; sha256="0fs8fhmk9j2nv2j87mpkmm0clz34f8kybnzn6pzqpcbwk0i2pcwg"; depends=[dplyr haven lifecycle rlang stringr tidyr vctrs]; }; labelmachine = derive2 { name="labelmachine"; version="1.0.0"; sha256="18l7argmf7d60cv34w7acjg4bk08nhi2cc5p61sx2zmq28v8nndr"; depends=[yaml]; }; labelrank = derive2 { name="labelrank"; version="0.1"; sha256="03pmpkjdhgw80473kdzdz4s4828pa8f5bja2zqicxrhvyvicvz6f"; depends=[pdist]; }; labourR = derive2 { name="labourR"; version="1.0.0"; sha256="0skr8qr1m849l3gpcsn5bjxyjczlzzmsm2j6xcmxv33lf95qg6gi"; depends=[cld2 data_table magrittr stopwords stringdist]; }; @@ -10361,29 +10758,30 @@ in with self; { labstats = derive2 { name="labstats"; version="1.0.1"; sha256="1780slp9l1rqwr5ika6hv606jzbaa3g1ywzkjkd3ff2gb0cby3ni"; depends=[]; }; lacm = derive2 { name="lacm"; version="0.1.1"; sha256="01zd4zsas60kzxx4wsnxs6qqc72i4djwj8m7ryjyx5nrxgpjaixc"; depends=[numDeriv statmod]; }; lacrmr = derive2 { name="lacrmr"; version="1.0.3"; sha256="0zpfc4a7krwkwbf31idpmdzks4qassqnhxk1f9fcq1qjzqzhjkvi"; depends=[dplyr httr janitor jsonlite magrittr sjmisc stringr]; }; - lactcurves = derive2 { name="lactcurves"; version="1.0.0"; sha256="06dj8ajg6ndnyakywy16wbqjjr2jkidvnjv33vxcacwijympaqqy"; depends=[orthopolynom]; }; - lacunaritycovariance = derive2 { name="lacunaritycovariance"; version="1.1-0"; sha256="059khrvjiirwd0p61lb1xjy1hz0hfazs9fqv9arpiq1q5cksx9hg"; depends=[RcppRoll spatstat]; }; + lactcurves = derive2 { name="lactcurves"; version="1.1.0"; sha256="1ksllpgz519gzrs8gwfgg7743vj3j7ikmbwgisdjs77sdxxl7xyz"; depends=[orthopolynom polynom]; }; + lacunaritycovariance = derive2 { name="lacunaritycovariance"; version="1.1-1"; sha256="0a3mn4gj5w63h01k3l49phn557fdjynw58dblq5hz9621gqdll1n"; depends=[RcppRoll spatstat spatstat_core spatstat_geom spatstat_linnet]; }; laeken = derive2 { name="laeken"; version="0.5.1"; sha256="199rjkhjjygpr6cjzab87as46acb5npi44m4yycvk7lnd0blma8s"; depends=[boot MASS]; }; laercio = derive2 { name="laercio"; version="1.0-1"; sha256="0la6fxv5k9zq4pyn8dxjiayx3vs9ksm9c6qg4mnyr9vs12z53imm"; depends=[]; }; lagged = derive2 { name="lagged"; version="0.3-0"; sha256="0bm3d6pgb25rw1njarki60j4d7mx7rni25a21iw1l650slg7sscm"; depends=[]; }; lagsarlmtree = derive2 { name="lagsarlmtree"; version="1.0-1"; sha256="1v3a580scxb1v5na3ab3ax9qlzbnay7nhm3ln5l8f9zgsqrg5lyh"; depends=[Formula partykit spatialreg]; }; lakemorpho = derive2 { name="lakemorpho"; version="1.1.1"; sha256="0asrp9rvyi5ykxw922qx25rgxvyc9mh4sc7qkbpwzqw8xvgpad2z"; depends=[cluster geosphere raster rgdal rgeos sp]; }; laketemps = derive2 { name="laketemps"; version="0.5.1"; sha256="04742r379bzgbfr4243wwkb26cvfmnw50jzgygq7vblq00grzska"; depends=[dplyr reshape2]; }; - lamW = derive2 { name="lamW"; version="1.3.3"; sha256="12p5y7475plwkf5dql635wih71vz9ay8c4fr4adk5mj66kgzbpbl"; depends=[Rcpp RcppParallel]; }; + lamW = derive2 { name="lamW"; version="2.0.0"; sha256="03aisn5qmhia61glm1lrcjxj73qp4qfhn6nc964gpnl5h9nwzhnw"; depends=[Rcpp RcppParallel]; }; lambda_r = derive2 { name="lambda.r"; version="1.2.4"; sha256="1mh1g0gsd58gng0hb29vww2yqb2jfs07kba5kxnnqck5j3izwlnj"; depends=[formatR]; }; + lambdaTS = derive2 { name="lambdaTS"; version="1.0.0"; sha256="0bd1kvvw573vagx7k2nylawgaf826bvqms4ar56cx54hys0blmm5"; depends=[abind bestNormalize bizdays fANCOVA ggplot2 imputeTS lubridate modeest narray purrr readr scales stringr tictoc torch]; }; lamme = derive2 { name="lamme"; version="0.0.1"; sha256="1x9jl79iqikpjixajly1k8w2nkzskns2m0v242giknl0ikw298h1"; depends=[]; }; landest = derive2 { name="landest"; version="1.0"; sha256="1lp5sfqk0n7i23fmwjgzsabml1fsji1h9xq5khxzaz1bzqv1s08g"; depends=[survival]; }; - landmap = derive2 { name="landmap"; version="0.0.6"; sha256="05g9q64ia6gycdld10hl4aplfgdm2qiwp16w5k8q14izm1q2pwld"; depends=[gdalUtils glmnet matrixStats mlr parallelMap ranger raster rgdal sp]; }; + landmap = derive2 { name="landmap"; version="0.0.9"; sha256="1dvzh9nxq47ygv1zyrzzmwdc92c36gmqdh1ciksq7bljpf7h6xq3"; depends=[forestError gdalUtils glmnet matrixStats meteo mlr parallelMap ranger raster rgdal sp]; }; landpred = derive2 { name="landpred"; version="1.0"; sha256="1bl17xkx18i8i7arccnjmxvhjn4yiy7w64hg4n0xmhk8pg0l3mrg"; depends=[survival]; }; landsat = derive2 { name="landsat"; version="1.1.0"; sha256="15ymmwhkgw0lqyy2sryss3nsmkrjf4cc0bzlsr41vh5c2636srfd"; depends=[lmodel2 mgcv rgdal sp]; }; landsat8 = derive2 { name="landsat8"; version="0.1-10"; sha256="169b5ka98ka9chbmksz6syaygc9wgl8i2gz1h2xkxj3lk9jcg01r"; depends=[rgdal sp]; }; landscapeR = derive2 { name="landscapeR"; version="1.2"; sha256="1zm5mj861ycbc2m28yjqnkifx8grc4l718mf8r422m78jfakvcjy"; depends=[raster Rcpp]; }; - landscapemetrics = derive2 { name="landscapemetrics"; version="1.5.1"; sha256="0mw7wivxg9vmx4qj3adwagm49ibrmckbibw58l70irwvcy8fp68p"; depends=[cli ggplot2 raster Rcpp RcppArmadillo sp tibble]; }; + landscapemetrics = derive2 { name="landscapemetrics"; version="1.5.2"; sha256="14cj9g2w9k3zjz1kl1crv84iy85knbbykfirw69gm8h2cfavdpnb"; depends=[cli ggplot2 raster Rcpp RcppArmadillo sp tibble]; }; landscapetools = derive2 { name="landscapetools"; version="0.5.0"; sha256="11zp6r414nkj8vhsbryzhkxmpal2bva8msaxf1v69xax70ilxyf1"; depends=[ggplot2 raster Rcpp tibble]; }; landsepi = derive2 { name="landsepi"; version="1.0.2"; sha256="0pyajgl9zy5s3yb7lvj0dmjbk2li4bacidqv7m1jdgfgqwdjrs0n"; depends=[DBI doParallel fields foreach Matrix mvtnorm Rcpp RSQLite sf sp splancs testthat]; }; languageR = derive2 { name="languageR"; version="1.5.0"; sha256="1iipnr2b4hd2w718prbh075j56m5xnchlcb2vg26m16qpydp6afn"; depends=[]; }; languagelayeR = derive2 { name="languagelayeR"; version="1.2.4"; sha256="1q82shdcdd84nr6bnfwgyyb81z8dycvj1i3vhwvdg710s15rgiyk"; depends=[attempt curl httr jsonlite]; }; - languageserver = derive2 { name="languageserver"; version="0.3.9"; sha256="1acjzc8ar3y0g8prwnsp7k3mgvg01h73mnyb4q2s3r7wkb4aqhrv"; depends=[callr collections desc fs jsonlite lintr R6 repr roxygen2 stringi styler xml2 xmlparsedata]; }; + languageserver = derive2 { name="languageserver"; version="0.3.10"; sha256="1m8hwqcznxyjj1kpl4nrw1nd4bilz0vk0vzz48qazwaj9qih18wj"; depends=[callr collections desc fs jsonlite lintr R6 repr roxygen2 stringi styler xml2 xmlparsedata]; }; languageserversetup = derive2 { name="languageserversetup"; version="0.1.2"; sha256="05i8kcp1zpbkrqpq5vxxvxk9p7phyngxl0q6v76va0i7qnmy1v7a"; depends=[]; }; lans2r = derive2 { name="lans2r"; version="1.1.0"; sha256="0svqaz1j8vhfnm31bfp4gqshdj73wmljva4kxcv2qajmcdiqbd2s"; depends=[dplyr ggplot2 R_matlab reshape2 rlang tidyr]; }; lar = derive2 { name="lar"; version="0.1-2"; sha256="0qda0y4ag10kg83wxs3z754kc8c1dg2rwciy64klk7an4ln43i5b"; depends=[data_table treemap xlsx]; }; @@ -10397,21 +10795,21 @@ in with self; { latdiag = derive2 { name="latdiag"; version="0.3"; sha256="13wk8vhiwr9drcx5f4wlgbin6hc83zv54yr4h3qhjagm3hxcxbw0"; depends=[Rdpack]; }; latentgraph = derive2 { name="latentgraph"; version="1.1"; sha256="11h7nrd81licvdikiwwfkz4x9i7drz09w5ns672b7fw0pj4qqgsr"; depends=[glmnet MASS pracma Rcpp RcppArmadillo]; }; latentnet = derive2 { name="latentnet"; version="2.10.5"; sha256="05yjf7a16imv1p2lg5dmfk183xll49crnkg0mbz4c4b39nksy85v"; depends=[abind coda ergm MASS mvtnorm network sna statnet_common]; }; - later = derive2 { name="later"; version="1.1.0.1"; sha256="1k9n2j7zxw9gfclnx8zfqp6w64c5d6apn7g02yhkajkpmszagfki"; depends=[BH Rcpp rlang]; }; - latex2exp = derive2 { name="latex2exp"; version="0.4.0"; sha256="12nbcgfmv13k6sc6m326ras9bcvy380b7rxcxphn06r3cfkby0zw"; depends=[magrittr stringr]; }; + later = derive2 { name="later"; version="1.2.0"; sha256="00f4n1b2ykrs2cd61pypa4d00ydx9hqq2c1a1p8psa2yym6979bm"; depends=[Rcpp rlang]; }; + latex2exp = derive2 { name="latex2exp"; version="0.5.0"; sha256="0qknpw7zwwbzsbry94j8fn48mq7kq5rc5448g9hybbisain3wfvg"; depends=[magrittr stringr]; }; + latexdiffr = derive2 { name="latexdiffr"; version="0.1.0"; sha256="021lhswy8nik2h1951h1affg8x5lchsa2amyx7fwrajp4bgq72yk"; depends=[fs rprojroot]; }; latexpdf = derive2 { name="latexpdf"; version="0.1.6"; sha256="07g33z5lyxinlrzpk6pd41m4c4bbfql611yqcqxasf8wra9bb0jr"; depends=[]; }; - latrend = derive2 { name="latrend"; version="1.0.1"; sha256="01m9zwp3gnl9msmsn5bxic29n36vgvhxxf8b8q9i233n1m772jh9"; depends=[assertthat caret clusterCrit data_table foreach ggplot2 lme4 longitudinalData magrittr matrixStats mclust mclustcomp plyr R_utils scales stackoverflow]; }; + latrend = derive2 { name="latrend"; version="1.1.2"; sha256="1g4dv648wfczjkncqrrzr2qzsjj93w6c4lsa3hivddpi9vbbl19w"; depends=[assertthat caret clusterCrit data_table foreach ggplot2 lme4 longitudinalData magrittr matrixStats mclust mclustcomp plyr R_utils Rdpack scales stackoverflow]; }; latte = derive2 { name="latte"; version="0.2.1"; sha256="1dcwxxj3yran5a3a8vvdfmx4ap69ql2jncxvmci4p4vcw4ki9j9g"; depends=[dplyr ggplot2 glue magrittr memoise mpoly stringr usethis]; }; - lattice = derive2 { name="lattice"; version="0.20-41"; sha256="1dapkmh4jlb9sxfrpvapvlfhczl4s8p3r20bn47gcgdk1izmbjjl"; depends=[]; }; - latticeDensity = derive2 { name="latticeDensity"; version="1.1.6"; sha256="1s93zhdmncaa5c42wjmrar2f95rxjsdf1qphgdzb7g4f61vijxy9"; depends=[sp spam spatialreg spatstat spdep splancs]; }; + lattice = derive2 { name="lattice"; version="0.20-44"; sha256="16yvdklwgjfclayh15axknjwzygx8i7y8zl5mlw8m85dqzihifap"; depends=[]; }; + latticeDensity = derive2 { name="latticeDensity"; version="1.2.6"; sha256="0l9ypdpy09nnmanj2gvaxzj79s8d9iqwy6rv0rig5fwbqv1y6135"; depends=[sf sp spam spatialreg spatstat spatstat_geom spdep splancs]; }; latticeExtra = derive2 { name="latticeExtra"; version="0.6-29"; sha256="04fzwcqs594rk5qp98yilh3kdh3sw4xf8wld5rp94ggpaqfw7bbc"; depends=[jpeg lattice png RColorBrewer]; }; - lava = derive2 { name="lava"; version="1.6.8.1"; sha256="1yiz8y3jhxkszgz9m9fialp9r27hy97xh0imfvs8ziv7dk43y93d"; depends=[numDeriv SQUAREM survival]; }; + lava = derive2 { name="lava"; version="1.6.9"; sha256="07difbrz8zmvdyns63958v0zw4hyv48956mcww8zh7064a564k83"; depends=[numDeriv SQUAREM survival]; }; lavaSearch2 = derive2 { name="lavaSearch2"; version="1.5.6"; sha256="0m5dwfmpcmicrpasx2raac2zylss416bxxgb3mg3abpll89iw9fx"; depends=[doParallel ggplot2 lava MASS Matrix multcomp mvtnorm nlme Rcpp RcppArmadillo reshape2 sandwich]; }; - lavaan = derive2 { name="lavaan"; version="0.6-7"; sha256="0ks62wrwghbm1brzmqvr92h5n1295dpc87m1g3xrfx0mkdaqdcdk"; depends=[MASS mnormt numDeriv pbivnorm]; }; + lavaan = derive2 { name="lavaan"; version="0.6-8"; sha256="18l49f1v7nrngwra4v983ic8w1d4w23ws8xf36337dq0j6809qj0"; depends=[MASS mnormt numDeriv pbivnorm]; }; lavaan_shiny = derive2 { name="lavaan.shiny"; version="1.2"; sha256="0qgswdpxb5af0l3v70sg0jrgsdwr88gz6zzwbk3pw5x6qnvnwb6r"; depends=[lavaan psych semPlot shiny shinyAce]; }; lavaan_survey = derive2 { name="lavaan.survey"; version="1.1.3.1"; sha256="133hpy8s00y6jzwwzl9brdh70w26jycdm3n1c6bcryghwh3ai4xr"; depends=[lavaan MASS survey]; }; - lavaanPlot = derive2 { name="lavaanPlot"; version="0.5.1"; sha256="01bx1snd3zhc8dmq0f407qhw2d00f6d38qpr791qc1mq5kr3d8qj"; depends=[DiagrammeR lavaan stringr]; }; - lawn = derive2 { name="lawn"; version="0.5.0"; sha256="0yvlps6g9ya383615y7x624hnwb6qfs6i5yg4cchp6lkvz2xdd5y"; depends=[jsonlite magrittr V8]; }; + lavacreg = derive2 { name="lavacreg"; version="0.1-1"; sha256="0w9p6crg81npzfyg306lx5rn79722ja5kz65qyglc1x2lfag0w3m"; depends=[fastGHQuad pracma Rcpp]; }; lawstat = derive2 { name="lawstat"; version="3.4"; sha256="1zrx5lsqfxlqjr68iz9hqghsla4m25hn5lyf8jwhw5229sw0n7a1"; depends=[Kendall mvtnorm Rdpack]; }; lax = derive2 { name="lax"; version="1.1.0"; sha256="0awk5qg339fvx7vdln0xzc1yz8h0dxgq7ypbmak41ddfqkyjhf9a"; depends=[chandwich numDeriv revdbayes sandwich]; }; lazy = derive2 { name="lazy"; version="1.2-16"; sha256="1psh3sng1pm23pjwy7iszb21ys7d29ry34ymvpgxj6zdhywwi5n7"; depends=[]; }; @@ -10424,19 +10822,19 @@ in with self; { lazyraster = derive2 { name="lazyraster"; version="0.5.0"; sha256="0zf9xlxyzmgxy1nl2kg7fvpfamjz04gf4yxjn3r9j7fjkik35cnp"; depends=[quadmesh raster vapour]; }; lazysf = derive2 { name="lazysf"; version="0.1.0"; sha256="19g0qzm0dxsa8m4dj4zmz8r674dw43pqs5gg6n3xfgm5dl9772jb"; depends=[DBI dbplyr dplyr magrittr sf tibble]; }; lazysql = derive2 { name="lazysql"; version="0.1.3"; sha256="18vff80rl8ckjwfqi9dhzs1q35a1wrxvynidji6dy2kvvk38xnpa"; depends=[checkmate magrittr plyr]; }; - lazytrade = derive2 { name="lazytrade"; version="0.4.3"; sha256="02qmfqgzdprc6cxm21zq46p5ybwrwyndb4ysf2fj55y7wi73vzmj"; depends=[dplyr ggplot2 h2o lubridate openssl readr ReinforcementLearning stringr]; }; + lazytrade = derive2 { name="lazytrade"; version="0.5.1"; sha256="1q3l4p277qmg95rvd0bajbnkj9nibvffhkcvpcj7v4hy2rjvfvib"; depends=[cluster dplyr ggplot2 h2o lifecycle lubridate openssl readr ReinforcementLearning stringr]; }; lba = derive2 { name="lba"; version="2.4.4"; sha256="0izqndm992zv3sg8v5lpnxbdbxhpxl6hq3bf6xgq3pnw8vl3f6nb"; depends=[alabama MASS plotrix rgl scatterplot3d]; }; lbfgs = derive2 { name="lbfgs"; version="1.2.1"; sha256="0p99g4f3f63vhsw0s1m0y241is9lfqma86p26pvja1szlapz3jf5"; depends=[Rcpp]; }; lbfgsb3c = derive2 { name="lbfgsb3c"; version="2020-3.2"; sha256="07mhiaxhjjma5c65z3pz7wchgsqn4b19labzyq25ncnmj319fxrg"; depends=[numDeriv Rcpp RcppArmadillo]; }; lbiassurv = derive2 { name="lbiassurv"; version="1.1"; sha256="1i6l3y4rasqpqka7j39qjx22wjbilgc9pkp05an52aysfvfxy193"; depends=[actuar]; }; lbreg = derive2 { name="lbreg"; version="1.3"; sha256="1z9vixf6sl0k9lizngc3859lk32srkk1d8y133sl6s37ppmqb4s2"; depends=[MASS]; }; lcars = derive2 { name="lcars"; version="0.3.6"; sha256="008dw30x4la3l2lq520c55sxfr4pflx3ii4xrkafrq17pndx3hmy"; depends=[ggplot2 shiny trekcolors]; }; - lcc = derive2 { name="lcc"; version="1.1.1"; sha256="0353k1ah0pwvvfqf9jlk0n6iw88rndm01r19l4q23ajg24n67jr4"; depends=[doRNG doSNOW foreach ggplot2 hnp nlme]; }; + lcc = derive2 { name="lcc"; version="1.1.2"; sha256="0kcaws22hzvvm6pgkzg27fzwc2avizk3330sjxa5004haw06pq7d"; depends=[doRNG doSNOW foreach ggplot2 hnp nlme]; }; lcda = derive2 { name="lcda"; version="0.3"; sha256="1ximsyn6qw2gfn7b1hdpbjs6h6nk7hrignlii0np1lbf0k8l4xxl"; depends=[poLCA]; }; lchemix = derive2 { name="lchemix"; version="0.1.0"; sha256="1g2w57fi6kvsyir14hnxh0v6xwjdnbisafvjxvn1g6a4h55dg9i0"; depends=[MCMCpack mvtnorm]; }; lclGWAS = derive2 { name="lclGWAS"; version="1.0.3"; sha256="03b6ijqvyirv96hc3dsqf4f0zzqlmq5451mcb14d2mw3s6xy1vmq"; depends=[BH Rcpp]; }; lcmm = derive2 { name="lcmm"; version="1.9.2"; sha256="0w58w7f7l51jc56n6vd3xsfr4c2hfd7qzgw328vppcm1ncq2g8mn"; depends=[survival]; }; - lconnect = derive2 { name="lconnect"; version="0.1.0"; sha256="0wk1kx0awj6d9w4sn0csws0sksx9cb4b4l9xpjqnyavc4zfhxj8l"; depends=[igraph sf]; }; + lconnect = derive2 { name="lconnect"; version="0.1.1"; sha256="1lx0z72aiy2hbh0wxn3ni3dyr3s2v8xirkvszlxvgfzkfmjx05j5"; depends=[igraph sf]; }; lcopula = derive2 { name="lcopula"; version="1.0.4"; sha256="11rjymm4zj3brifzrrfwqv9v8rzkzqk072xlzyjxm2p08dd11xxb"; depends=[copula pcaPP Rcpp]; }; lcpm = derive2 { name="lcpm"; version="0.1.1"; sha256="0pqmizli5rhyaxvxrjycf8d5kqrm23i3vdz00r8zmijjpiz2p9s2"; depends=[Matrix numDeriv plyr]; }; lcra = derive2 { name="lcra"; version="1.1.2"; sha256="1kyjzb5ss64pg1sdnc8h7npcf4hsfgf4hhqh2yxl50d2zf4a4iyl"; depends=[coda rjags rlang]; }; @@ -10451,16 +10849,16 @@ in with self; { ldbod = derive2 { name="ldbod"; version="0.1.2"; sha256="1ylzkswnhf4jnjx2ijasy49pj78ffx333za0bx2fnf3g85kicqiv"; depends=[mnormt RANN]; }; ldbounds = derive2 { name="ldbounds"; version="1.1-1.1"; sha256="10rmkidvvhwnrkc62c5ld44xhbvx1k8mch28h1yryakn8gznp3p8"; depends=[lattice]; }; ldhmm = derive2 { name="ldhmm"; version="0.5.1"; sha256="1jwgxwzz56n6hhpp1qks1x0jsfbrjgfsl6h5sp7498l4d2f279ij"; depends=[ecd ggplot2 moments optimx scales xts zoo]; }; - ldr = derive2 { name="ldr"; version="1.3.3"; sha256="1c48qm388zlya186qmsbxxdcg1mdv3nc3i96lqb40yhcx2yshbip"; depends=[GrassmannOptim Matrix]; }; - ldsep = derive2 { name="ldsep"; version="1.1.0"; sha256="172iyx08kf5gq8ynbd9pkc4xyw0z2dyr8sjrpp9as0qb0y50kih1"; depends=[ashr corrplot doParallel foreach lpSolve Rcpp RcppArmadillo]; }; + ldsep = derive2 { name="ldsep"; version="2.0.2"; sha256="1i8mw7rwk9hcx8f6y27c8lab8sv78hnksxnb0yhqcdrn7knvgyy1"; depends=[abind ashr corrplot doParallel foreach lpSolve matrixStats modeest Rcpp RcppArmadillo]; }; ldsr = derive2 { name="ldsr"; version="0.0.2"; sha256="0wmxpglad1mk2c1gi9kxmh149r8ad0l8i2xlfs1hdjb6a4wxsklr"; depends=[data_table foreach MASS Rcpp RcppArmadillo]; }; leabRa = derive2 { name="leabRa"; version="0.1.0"; sha256="08yiwyfg9bp4i9w5yyw9p63wyvgj39kd64y3h21j2jmpw8zxncdq"; depends=[plyr R6]; }; leaderCluster = derive2 { name="leaderCluster"; version="1.2"; sha256="1lqhckarqffm2l3ynji53a4hrfn0x7zab7znddia76r2h6nr02zb"; depends=[]; }; - leafR = derive2 { name="leafR"; version="0.3"; sha256="0bb05y0py2q0qmvapbv3ibrycjb8i4adl25807i8l7g768y3llsr"; depends=[data_table lazyeval lidR raster sp]; }; leafSTAR = derive2 { name="leafSTAR"; version="1.0"; sha256="16zfaj0v6dx6mhy6m126lxa6w0dzfw4acm83jlbrizaz52amhv6a"; depends=[]; }; + leafdown = derive2 { name="leafdown"; version="1.0.0"; sha256="1zvgbglrb4javazvyph7b48x3qab7kiziiya1a1wccdm9l6qh58w"; depends=[checkmate leaflet magrittr R6 shiny shinyjs]; }; leafem = derive2 { name="leafem"; version="0.1.3"; sha256="017kcyyvcf8v9dvvw2zyrwjwjpdgnzih64602z9qbnzsbv0ky4kg"; depends=[base64enc htmltools htmlwidgets leaflet png raster sf]; }; leafgl = derive2 { name="leafgl"; version="0.1.1"; sha256="042jps6zh4xr0xj19a7fbgrcb6q6gsw2q5f191lyskr8iajdrz1h"; depends=[geojsonsf htmltools jsonify leaflet sf]; }; - leaflet = derive2 { name="leaflet"; version="2.0.3"; sha256="053kn4a2lbhzq2c68c4q782yrbyx4a7zw7j1s6p7k2d75chk1aja"; depends=[base64enc crosstalk htmltools htmlwidgets leaflet_providers magrittr markdown png raster RColorBrewer scales sp viridis]; }; + leaflegend = derive2 { name="leaflegend"; version="0.2.0"; sha256="1h96ksj5y88ns3nnj4wpdiglqxdydkzdd5215lw31aiq2f0zim7f"; depends=[base64enc htmltools knitr leaflet]; }; + leaflet = derive2 { name="leaflet"; version="2.0.4.1"; sha256="07whi3zkz1lmbqx5ydpiya802ck22ny0s7gskwnx7r8xbwlkiw5h"; depends=[base64enc crosstalk htmltools htmlwidgets leaflet_providers magrittr markdown png raster RColorBrewer scales sp viridis]; }; leaflet_esri = derive2 { name="leaflet.esri"; version="1.0.0"; sha256="01bwzxh2rdhpvvazaxsji8axl765q1ix1fdxla6i61nvqkpw3dz1"; depends=[htmltools leaflet leaflet_extras]; }; leaflet_extras = derive2 { name="leaflet.extras"; version="1.0.0"; sha256="0li7651cwlz7sg04xdrmvhkrf0n6amaydck7gqz0wkb6wq8hcyzw"; depends=[htmltools htmlwidgets leaflet magrittr stringr]; }; leaflet_extras2 = derive2 { name="leaflet.extras2"; version="1.1.0"; sha256="138d2ajma3fkz7nsh50z4gw5zaflas39gsy7k5l120hxr7nmzgfk"; depends=[htmltools leaflet magrittr]; }; @@ -10483,22 +10881,23 @@ in with self; { learnr = derive2 { name="learnr"; version="0.10.1"; sha256="08xwmms6x58y3dsfbl9c6d03145hb4ij97nqr1cc9dxxilmr6x31"; depends=[checkmate ellipsis evaluate htmltools htmlwidgets jsonlite knitr markdown rappdirs renv rmarkdown rprojroot shiny withr]; }; learnrbook = derive2 { name="learnrbook"; version="1.0.1"; sha256="1yijkwy2v0qh1r3irx7bwyasw938lclsawdam2dkap76qavfrli9"; depends=[]; }; learnstats = derive2 { name="learnstats"; version="0.1.1"; sha256="1sa064cr7ykl4s1ssdfmb3v1sjrnkbwdh04hmwwd9b3x0llsi9vv"; depends=[ggplot2 Rcmdr shiny]; }; - leastcostpath = derive2 { name="leastcostpath"; version="1.7.4"; sha256="1m8n8pliwm2bp03fqyrhwlq4ij90hvq1hg44mi6dc9m4qz36vfls"; depends=[gdistance pbapply raster rgdal rgeos sp]; }; + leastcostpath = derive2 { name="leastcostpath"; version="1.8.0"; sha256="1106wh2yy048jimiyb3gwm9d00jfq4wk0dnj4a5sfk90rkg28acw"; depends=[gdistance Matrix pbapply raster rgdal rgeos sp]; }; ledger = derive2 { name="ledger"; version="2.0.7"; sha256="07shnvawahm9bvwz37fynkp7sd69y9gc1mjhn7x8883jz8k4mjic"; depends=[dplyr rio rlang stringr tibble tidyr tidyselect]; }; leerSIECyL = derive2 { name="leerSIECyL"; version="1.0.2"; sha256="1zx28gpnys9mmhq7wwljfnq92wj1h1vxgqiirnfmn36z942nvmxl"; depends=[RCurl]; }; - lefko3 = derive2 { name="lefko3"; version="3.1.2"; sha256="1bfbiiwq4sjv44gr20i0anazgsf6g9sla0iif8g36xr8km9mjaf4"; depends=[glmmTMB lme4 MASS MuMIn pscl Rcpp RcppArmadillo stringr]; }; + lefko3 = derive2 { name="lefko3"; version="3.4.0"; sha256="1vlhbpz11sa59kxgcrnisf01i0b5dbigir4cmxr1rn7fw9x1c9hs"; depends=[glmmTMB lme4 MASS MuMIn pscl Rcpp RcppArmadillo SparseM stringr VGAM]; }; legco = derive2 { name="legco"; version="0.1.3"; sha256="1615whdqihpzfhp5ll3x3jg4py04l52dc87kbdmgln4ygxyy5sqh"; depends=[httr jsonlite]; }; legislatoR = derive2 { name="legislatoR"; version="1.0"; sha256="1553hpb2cmv3hw6v4c7qwgg8n18jwx101yaqnmaaiv8gfyh6j43m"; depends=[curl dplyr]; }; - legocolors = derive2 { name="legocolors"; version="0.2.0"; sha256="06jbq12jzga1p5jajhnnkk11s9gjw5ngmnrvhmbvirhsbafp0fjv"; depends=[]; }; - leiden = derive2 { name="leiden"; version="0.3.6"; sha256="1k1250bjgf2cb1whp2sl1r6b88156qwi2zkamw5iy2q1qhw6w2d7"; depends=[igraph Matrix reticulate]; }; - leidenAlg = derive2 { name="leidenAlg"; version="0.1.0"; sha256="0i6vfd4sa6bb3v47zz0mj90kppkzngbf180qczka99pyfhzfy4a2"; depends=[igraph Matrix Matrix_utils Rcpp RcppArmadillo RcppEigen sccore]; }; + legocolors = derive2 { name="legocolors"; version="0.3.1"; sha256="0ds9c2x0x590yk7mrjm4hh7k72p51slssg7jlprd71mw6hry91ma"; depends=[]; }; + lehdr = derive2 { name="lehdr"; version="0.2.4"; sha256="00ddpjzpb7n1hnkx7y49wrak8gdxc48c69p37nk0f2mhg729qxl8"; depends=[dplyr glue httr rappdirs readr rlang stringr]; }; + leiden = derive2 { name="leiden"; version="0.3.7"; sha256="14iqn5iqcya6bqbjvjivpd7q9gwc323sj29y7ssrbhb3sz9982bp"; depends=[igraph Matrix reticulate]; }; + leidenAlg = derive2 { name="leidenAlg"; version="0.1.1"; sha256="1540h4jak4g482d3g9iqrgp388mmbw3640swh9bsk6xhg1j8r0s7"; depends=[igraph Matrix Matrix_utils Rcpp RcppArmadillo RcppEigen sccore]; }; leiv = derive2 { name="leiv"; version="2.0-7"; sha256="15ay50886xx9k298npyksfpva8pck7fhqa40h9n3d7fzvqm5h1jp"; depends=[]; }; lemon = derive2 { name="lemon"; version="0.4.5"; sha256="1y3ljidhqdakxlya2npj2w0az820g8kw6gl1cfm4f0cxvzgd1ly4"; depends=[ggplot2 gridExtra gtable knitr lattice plyr rlang scales]; }; lenses = derive2 { name="lenses"; version="0.0.3"; sha256="08akwzlc5gk2rxbh9xp67n5ahdcld60932ascczjv0accrkxizhk"; depends=[magrittr rlang tidyselect]; }; leontief = derive2 { name="leontief"; version="0.2"; sha256="1gy23047c6gci9m83yrb662d5685x1kky6m94w68swms59gdc6yp"; depends=[Rcpp RcppArmadillo]; }; leri = derive2 { name="leri"; version="0.0.1"; sha256="1309v58xdw3p6y2wpnl64vgsds5kvfiary2a3fa041kz23jzbp3c"; depends=[ncdf4 raster]; }; lero_lero = derive2 { name="lero.lero"; version="0.2"; sha256="03ll7jzcay0swwpmxyf0y9k2h8mxx4p5v3ggm9dgdz4j99934l70"; depends=[]; }; - lessR = derive2 { name="lessR"; version="3.9.8"; sha256="10gh0bbpyzf33vz00mzhw7zk7ha9njwif7xdasczk0lghdacwy8d"; depends=[colorspace ellipse knitr lattice latticeExtra leaps openxlsx robustbase triangle viridisLite]; }; + lessR = derive2 { name="lessR"; version="3.9.9"; sha256="0p567g1zgagas3ky0pqffn26s1hw7sh56r5nbbs3xn9fl0iff60i"; depends=[colorspace ellipse knitr lattice latticeExtra leaps openxlsx robustbase viridisLite]; }; lest = derive2 { name="lest"; version="1.1.0"; sha256="1d69kvdl31crv4ik8bwylq3s3f4skzrjc4x49c79w443g64n2jp9"; depends=[]; }; lestat = derive2 { name="lestat"; version="1.9"; sha256="1skxymdf3ncmdbskh7711xxgwsmwxfxnl52gcgw06jscx6s6wrsd"; depends=[MASS]; }; letsR = derive2 { name="letsR"; version="4.0"; sha256="07l1wgwnkqnvh47ssg62vj88vgml52n0934w00pjxdk90kk3c5zs"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; }; @@ -10507,77 +10906,82 @@ in with self; { lexiconPT = derive2 { name="lexiconPT"; version="0.1.0"; sha256="0w53gnr29nzc1ib54rnxdycs0c5f7vpv586qmvxxzy4ar16kisaq"; depends=[]; }; lfactors = derive2 { name="lfactors"; version="1.0.4"; sha256="1r8qlwj3zsm233jfx9ag0q5g1knvjmbwl3785pwcd12zi6f68dcc"; depends=[]; }; lfda = derive2 { name="lfda"; version="1.1.3"; sha256="0sk409jx4chs2wzhpfw7rlg9pwpdqg32ncfl3w243ypq73jq0qv3"; depends=[plyr rARPACK]; }; + lfe = derive2 { name="lfe"; version="2.8-6"; sha256="04hn227zmvk5jjdn0rxn0rjsx2f4cajhvwrna8d8fbkjx5id6pxz"; depends=[Formula Matrix sandwich xtable]; }; lfl = derive2 { name="lfl"; version="2.1.1"; sha256="1xark6il5986vsp24vzc6668g0hb177d5wh45gw102644jnq64y9"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; lfmm = derive2 { name="lfmm"; version="1.0"; sha256="0n7whmqxybv02k7nc0w5g2ncs43dyq3zdcnnn27vanq9mfxvhbjc"; depends=[foreach ggplot2 knitr MASS purrr Rcpp RcppEigen readr rmarkdown RSpectra]; }; lfstat = derive2 { name="lfstat"; version="0.9.4"; sha256="0lm9fyw45kdkkjldkmagykn9p3l3jlw2ky3h00f7j6rqkizjm6r0"; depends=[dygraphs lattice latticeExtra lmom lmomRFA plyr xts zoo]; }; lg = derive2 { name="lg"; version="0.4.1"; sha256="1srlklq6hkb4yd3lbbazswj866i3wzk2524hhj1v45yr7d5qhxv0"; depends=[ggplot2 ks localgauss logspline mvtnorm np tseries]; }; lgarch = derive2 { name="lgarch"; version="0.6-2"; sha256="05xksc4d6dbf5ls4lf2gpk9xyi99fikr7dva88b84rfgads1yhrh"; depends=[zoo]; }; - lgcp = derive2 { name="lgcp"; version="1.6"; sha256="1bsf69l81w7182ay4lrq1miqdr4f4jv5ppcalrqhqjcwhkq1nlkb"; depends=[fields iterators maptools Matrix ncdf4 RandomFields raster rgeos rpanel sp spatstat spatstat_utils]; }; - lgr = derive2 { name="lgr"; version="0.4.1"; sha256="196553hmni1ha9y6494f4g3ds0lwcl81v7k4r8wwap4a6acdrgd9"; depends=[R6]; }; + lgcp = derive2 { name="lgcp"; version="1.7"; sha256="0i45n31wxznl6485zsa5nnfhy4f3lya9sijyavdcwx0v8j2gkpvr"; depends=[fields iterators maptools Matrix ncdf4 RandomFields raster rgeos rpanel sp spatstat spatstat_core spatstat_geom spatstat_utils]; }; + lgr = derive2 { name="lgr"; version="0.4.2"; sha256="0k4kacjk7swm3gmdpha1rg44xb29vzvhvx48jhpb78glj5c9phyr"; depends=[R6]; }; + lgrExtra = derive2 { name="lgrExtra"; version="0.0.5"; sha256="0h34rb8diavs7an45nng8xfs96x3h2kkl9xy7yzjg851m3f7pbiq"; depends=[data_table lgr]; }; lgrdata = derive2 { name="lgrdata"; version="0.1.1"; sha256="0h1crdhqfp6hzx30lp0w015scf2566hhrl2i7mkxy868rkl3aig9"; depends=[]; }; lgtdl = derive2 { name="lgtdl"; version="1.1.5"; sha256="1sixq56d2px36q0xq3kl0zwj2yzm3q8fhgqjvmajcdd5jl8l7130"; depends=[]; }; lhmixr = derive2 { name="lhmixr"; version="0.1.0"; sha256="1c4ydgq1z2y0xk8xqdsim6xvgxdbl3gglfk5kcr9k4m01arvv0rf"; depends=[]; }; lhs = derive2 { name="lhs"; version="1.1.1"; sha256="1p4h03qlijs2a59wfd4rlvdlb9i87pw2zm8xsjd6yzz8vlm9yglh"; depends=[Rcpp]; }; liayson = derive2 { name="liayson"; version="1.0.3"; sha256="10xkzy4vlszcdclrdv0d6nyzgh3ldr5rk59ml8bxx06dbh5c0h99"; depends=[ape arules biomaRt distances e1071 gplots matlab phangorn plyr proxy RColorBrewer]; }; - libcoin = derive2 { name="libcoin"; version="1.0-6"; sha256="0njfdbz4mkyasxm80p0fb0qibvzz7kdzddn8ybj2k6y8bx0w3bs8"; depends=[mvtnorm]; }; - libgeos = derive2 { name="libgeos"; version="3.8.1-3"; sha256="159mx1dlimfajpv8r34bc6pv1lxagi4b5jk08csy7qpbgvr8hg3c"; depends=[]; }; - libr = derive2 { name="libr"; version="1.0.1"; sha256="1nqwiifrsw242yyqwaq80zl2ykz50is2yrssyp35jd1mf39r35lm"; depends=[crayon dplyr haven openxlsx readr readxl tibble]; }; + libbib = derive2 { name="libbib"; version="1.5"; sha256="1jr2nvf66b4rh7mf77l5gi35zwz61wgshs7if3sqxrr6pxlcx0wc"; depends=[curl data_table pbapply stringr xml2]; }; + libcoin = derive2 { name="libcoin"; version="1.0-8"; sha256="0izgnr4zdrbz3a05b0s28xfly4izp2zslgh282l9ads4skrmj3hl"; depends=[mvtnorm]; }; + libgeos = derive2 { name="libgeos"; version="3.8.1-4"; sha256="0h6n92rxha52m5nq2gvxh9q5bkaifbxh1qxm5sq0cc1kb939vfba"; depends=[]; }; + libr = derive2 { name="libr"; version="1.1.3"; sha256="10jq2675gp0zrxld64bd3j8rm62vgvary7mriaam16bp7yx59raq"; depends=[crayon dplyr haven openxlsx readr readxl tibble]; }; librarian = derive2 { name="librarian"; version="1.7.0"; sha256="0n3q2ppa3p0w8ypgx9s738pmprfbqi9qg8n58xzplp809p903dj9"; depends=[BiocManager remotes]; }; librarysnapshot = derive2 { name="librarysnapshot"; version="0.1.2"; sha256="0v4x564zpm58kxs5n84bi6mcjhbzjg6a2lc30vsc8kbm3qy0nq38"; depends=[]; }; libsoc = derive2 { name="libsoc"; version="0.7"; sha256="1r548rvj98wl0yp6jx5d2qhvy1y4883qp0w3jjk97vp07a1cywn8"; depends=[]; }; libstableR = derive2 { name="libstableR"; version="1.0.2"; sha256="1gkcgbc8a7ks9x8mqmlz98hk55q3qy62izam7csz1s0r5dzsyqcr"; depends=[Rcpp RcppGSL]; }; - lidR = derive2 { name="lidR"; version="3.0.4"; sha256="0d0r381kxbj9cswjpgyhh1ggzyv25fqp5qq676cggxmxqy74znki"; depends=[BH data_table future gdalUtils geometry glue lazyeval raster Rcpp RcppArmadillo RCSF rgdal rgeos rgl rlas sf sp]; }; - lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.6"; sha256="0v8xrnmviq938x779f3h55iq8bhvbkwgz35v1dxgzbxwclj7jycl"; depends=[markovchain Rcpp]; }; + lidR = derive2 { name="lidR"; version="3.1.2"; sha256="1502rg3j219kw2919sbjcfy3xfki6wzzfxw8q5w8zm5mxn7jgbg4"; depends=[BH data_table future geometry glue lazyeval raster Rcpp RcppArmadillo RCSF rgdal rgeos rgl rlas sf sp]; }; + lidaRtRee = derive2 { name="lidaRtRee"; version="3.0.3"; sha256="0v475b6i37rjnq4gfzjnrs0y6w37c84lzi72yf20c4nxq3x7ppdk"; depends=[car gvlma imager leaps lidR raster reldist sp]; }; + lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.7"; sha256="00vqbrv1y3hg8iqx6mfm7p81a23hf69kc20pzacsx93yqdh97841"; depends=[markovchain Rcpp]; }; lifecourse = derive2 { name="lifecourse"; version="2.0"; sha256="1m8ihqvzhzpq2m2pdvh37bpq9pdbj23r3y0jkl3q8farh3qj473d"; depends=[TraMineR]; }; - lifecycle = derive2 { name="lifecycle"; version="0.2.0"; sha256="0912865c6675fsblrfdk6s568krsj1x8qbk1kipy7m05xs6nwx19"; depends=[glue rlang]; }; + lifecycle = derive2 { name="lifecycle"; version="1.0.0"; sha256="13hgxk93q9387s8dnqpm8dfx610y0pr76khqksj4kbgj2fr4lcq3"; depends=[glue rlang]; }; lifelogr = derive2 { name="lifelogr"; version="0.1.0"; sha256="1wygvw61ygpww0kahxhmjdncwg4zc2cshs0brzw18nfqaj8vpfav"; depends=[dplyr fitbitScraper ggplot2 lazyeval lubridate modelr plyr R6 shiny stringr tibble tidyr]; }; lift = derive2 { name="lift"; version="0.0.2"; sha256="0ynsyl6lw7z7bvwzk2idgxzzqji5ffnnc3bll9h4gwdw666g7fln"; depends=[]; }; liftLRD = derive2 { name="liftLRD"; version="1.0-8"; sha256="1m24f4mc70l808cpkcdm91hzb5b3bkzibvgyfi9zs6cs8apcvmy3"; depends=[adlift nlt]; }; liftr = derive2 { name="liftr"; version="0.9.2"; sha256="0azi831c4f0vcq27a3q86vj90zvwrzcy4plhj9hqkk4qz8xw113x"; depends=[knitr rmarkdown rstudioapi stringr yaml]; }; lifx = derive2 { name="lifx"; version="0.2.0"; sha256="0p9ljd3s3lc1rkhzpp801izy9y52f0yc1dsrsxwx5gi89cnib596"; depends=[assertthat crayon curl httr jsonlite]; }; - liger = derive2 { name="liger"; version="1.1.2"; sha256="0jfjvqg5bk7hlk58c0ywq2i4dvn3jv8fnrq4nzsv2hkb77hl45vh"; depends=[matrixStats Rcpp RcppArmadillo]; }; - lightgbm = derive2 { name="lightgbm"; version="3.1.1"; sha256="1pwsh6j9ksahh58b15j5ij56bsc6syy3z4k4a5zhy5n7829rz555"; depends=[data_table jsonlite Matrix R6]; }; - lightr = derive2 { name="lightr"; version="1.3"; sha256="11z1n88cs0knpicpxfkzmh20p49g07syfv32sizjap2cnn7l4q3a"; depends=[future_apply progressr xml2]; }; + liger = derive2 { name="liger"; version="2.0.1"; sha256="121ipwznm40x2xhhlxd20385va4nmvgni5dg24lbhyfn5sb3dsy1"; depends=[matrixStats Rcpp RcppArmadillo]; }; + lightgbm = derive2 { name="lightgbm"; version="3.2.1"; sha256="1136di7k3gs9kk7vd9bc3mdm0qrx3a546ngar8inmgyhi0zk6pkd"; depends=[data_table jsonlite Matrix R6]; }; + lightr = derive2 { name="lightr"; version="1.4"; sha256="1vpbvi5gjfxvgqznvb8fzcfn4kgphs9n3x4n2432zb3n38rnaljh"; depends=[future_apply progressr xml2]; }; lightsout = derive2 { name="lightsout"; version="0.3"; sha256="0ypniqf9wk35dd9j57wd7gxchr5hy25fwhmkndz2z8b9ajhm3c9b"; depends=[magrittr shiny shinyjs]; }; likeLTD = derive2 { name="likeLTD"; version="6.3.0"; sha256="1mjf4667xd9pf2684d7vqaj54l5s9pgljn4vkfp32wzbfknq6y8r"; depends=[DEoptim gdata ggplot2 gtools rtf]; }; likelihood = derive2 { name="likelihood"; version="1.7"; sha256="0q8lvwzlniijyzsznb3ys4mv1cqy7ibj9nc3wgyb4rf8676k4f8v"; depends=[nlme]; }; likelihoodAsy = derive2 { name="likelihoodAsy"; version="0.51"; sha256="0qxwdf6npyj926zd2pbfscgz1z01hwgm6099h882d2l1sim2j9g7"; depends=[alabama cond digest nleqslv pracma Rsolnp]; }; likelihoodExplore = derive2 { name="likelihoodExplore"; version="0.1.0"; sha256="13cnql7pbx8qq1j3cfb3lkzzf2k55shpfa0jd00z30ys6imxzcfn"; depends=[lazyeval plyr]; }; + likelihoodR = derive2 { name="likelihoodR"; version="1.0.4"; sha256="0bkls9yrq5h5kb23v52m3f90ryf91ld5i9pndy8gvm0gw1as2nrj"; depends=[]; }; likert = derive2 { name="likert"; version="1.3.5"; sha256="0c4irxs7pp1z8nj4s8cq23daw4h94n3h7x4f6q1d85614qcl9l3p"; depends=[ggplot2 gridExtra plyr psych reshape2 xtable]; }; - lilikoi = derive2 { name="lilikoi"; version="2.0.3"; sha256="1sk98bmwdh9a4c07b3sbmyqrgcsgnz13x6id6irv47dr298qs07a"; depends=[car caret dplyr gbm ggplot2 glmnet h2o impute infotheo limma M3C Metrics MLmetrics pathifier pathview plyr preprocessCore pROC RCy3 reshape reticulate RWeka scales stringr survival survminer]; }; - lillies = derive2 { name="lillies"; version="0.2.8"; sha256="154xjnd64icgjjlp68h6fv8fx8z15kdp2frgdqw5cxpchh3jw6pp"; depends=[ddpcr dplyr knitr pracma progress rlang survival tidyr]; }; + lilikoi = derive2 { name="lilikoi"; version="2.0.4"; sha256="037iq4kqn9iwdq70hq1l7w1ak533ba43npnkr6yk6jnl7avf4bma"; depends=[car caret dplyr gbm ggplot2 glmnet h2o impute infotheo limma M3C Metrics MLmetrics pathifier pathview plyr preprocessCore pROC RCy3 reshape reticulate RWeka scales stringr survival survminer]; }; + lillies = derive2 { name="lillies"; version="0.2.9"; sha256="0ljqfl9w26z61fivzlr4sh371s418alzzkdlhghsq0w03871wd3h"; depends=[ddpcr dplyr knitr pracma progress rlang survival tidyr]; }; limSolve = derive2 { name="limSolve"; version="1.5.6"; sha256="1829rd2cnd8qj80z9a7sgc7gx4sf3kvl5g6d2a0lqqw30f9sjzmr"; depends=[lpSolve MASS quadprog]; }; - lime = derive2 { name="lime"; version="0.5.1"; sha256="021wz43dfc3f2k275c98hcnnx7dyyjj18dm2zf8vh7rbk9bnf0sj"; depends=[assertthat ggplot2 glmnet gower htmlwidgets Matrix Rcpp RcppEigen shiny shinythemes stringi]; }; + lime = derive2 { name="lime"; version="0.5.2"; sha256="03b88s82f0386c44j3z74dwp9f765wx9n1ahrjpy0s2j0pfa5z09"; depends=[assertthat ggplot2 glmnet gower Matrix Rcpp RcppEigen stringi]; }; limitplot = derive2 { name="limitplot"; version="1.2"; sha256="0wj1xalm80fa5pvjwh2zf5hpvxa3r1hnkh2z9z285wkbrcl0qfl2"; depends=[]; }; lin_eval = derive2 { name="lin.eval"; version="0.1.2"; sha256="05saxzzwh3gs6a4ii63n5kjm06p399xkyrjnqvn9f164322p7pwb"; depends=[broom]; }; linERR = derive2 { name="linERR"; version="1.0"; sha256="1mhiyqfpwagg161ncp5ndd22hlh12qzr360nms13rgyd8a077cq7"; depends=[survival]; }; linLIR = derive2 { name="linLIR"; version="1.1"; sha256="1v5bwki5j567x2kndfd5nli5i093a33in31025h9hsvkbal1dxgp"; depends=[]; }; - linbin = derive2 { name="linbin"; version="0.1.2"; sha256="0shw976nlryjvmvnyyiycchqs7zcg5flalywm1ymnv62nw3n55xs"; depends=[]; }; + linbin = derive2 { name="linbin"; version="0.1.3"; sha256="04x97ah45qljpa4kg1iqz85w0q7936n4sq7vbzk2mx5m87p83czh"; depends=[]; }; lindia = derive2 { name="lindia"; version="0.9"; sha256="1qma8wr0fkwx03x971crkh8cfc8z4374py1r1wvszj9wzi4vfp5r"; depends=[ggplot2 gridExtra MASS]; }; linear_tools = derive2 { name="linear.tools"; version="1.3.0"; sha256="14lp3gifzbid82lkr7rdqajz2abp8m7y8irpwx6s8w66djjfckda"; depends=[ggplot2 magrittr plyr pryr scales stringr]; }; linearOrdering = derive2 { name="linearOrdering"; version="1.0.0"; sha256="1y9wcmcwbaqphzv8mk3xgk49pmd8m020zv3qmi85b5kzzqam1r4z"; depends=[]; }; linearQ = derive2 { name="linearQ"; version="2.0"; sha256="0sx7bx0x1k193day5w1dbmc09kn5741pcilxijjn2y5aijhd5wk9"; depends=[Rcpp stepR]; }; lineartestr = derive2 { name="lineartestr"; version="1.0.0"; sha256="0bzsywk97j2mmsi7pj9267za1q2601crynh9kszwj6xjbg08nvsm"; depends=[dplyr forecast ggplot2 Matrix readr sandwich tidyr viridis]; }; - linemap = derive2 { name="linemap"; version="0.1.0"; sha256="0qkbmpfr742xbs3xn5ppx6q0prwrr9mk1c1mv050cm47dm7jcs6l"; depends=[sf]; }; + linemap = derive2 { name="linemap"; version="0.2.0"; sha256="04nb0hmmikksp7ak4vdam9r2dpv7w3r5wkxxbjr7yk9pfq5gjncp"; depends=[sf]; }; lineqGPR = derive2 { name="lineqGPR"; version="0.1.1"; sha256="180rvmpasdw8r3w5lw6dxg5jkj875dklvifi2msyp0vaq1nbpbwp"; depends=[broom ggplot2 MASS Matrix mvtnorm nloptr plot3D purrr quadprog tmg TruncatedNormal]; }; lineup = derive2 { name="lineup"; version="0.38-3"; sha256="15m90cg700lq1w54adkmld876fpr41nhv1y0vqwbhwwfjgfxj700"; depends=[class qtl]; }; - lineup2 = derive2 { name="lineup2"; version="0.2-5"; sha256="0yb7nh86gzjwr44prsg50zgdh9sac2zcnf6fiksdisqsc7v21b5q"; depends=[Rcpp]; }; + lineup2 = derive2 { name="lineup2"; version="0.4"; sha256="18qak0qjdzr34fslh3qc9q25mr06jzjf00aafnvhcmnkav7d5bv5"; depends=[Rcpp]; }; + lingmatch = derive2 { name="lingmatch"; version="1.0.2"; sha256="1986vi8r105wsd27vzy7wq9w0flgmgigssa3p0j7xmgr4kmjkks4"; depends=[Matrix Rcpp RcppParallel]; }; lingtypology = derive2 { name="lingtypology"; version="1.1.4"; sha256="04pfgnwfywfwzw3xgi0xd5mi9dgjgj65i32hm5b8zjj5pamk9hcv"; depends=[leaflet leaflet_minicharts stringdist]; }; linguisticsdown = derive2 { name="linguisticsdown"; version="1.2.0"; sha256="1y2g8h0p4q4mjrawzyprsdw8ynqcbpnjypyhdaf03pcwqglcirkl"; depends=[DT knitr magrittr miniUI rstudioapi shiny stringr]; }; link2GI = derive2 { name="link2GI"; version="0.4-5"; sha256="0vmmhalxazny0j871fwbh0z21b63wang69l2wkpw3awkn3fsaqz4"; depends=[devtools R_utils raster roxygen2 sf stringr]; }; - linkcomm = derive2 { name="linkcomm"; version="1.0-13"; sha256="1247pjx7dnlghhgm5jj1ck2hp44z1i0syfk62h8dslx19pwaznb3"; depends=[dynamicTreeCut igraph RColorBrewer]; }; + linkcomm = derive2 { name="linkcomm"; version="1.0-14"; sha256="15xm4c7sqpid1vjra250dnvdx98qgzbzmvaycf3zqqnqcmy5bw9n"; depends=[dynamicTreeCut igraph RColorBrewer]; }; linkim = derive2 { name="linkim"; version="0.1"; sha256="0yvyid9x59ias8h436a202hd2kmqvn8k1zcrgja2l4z2pzcvfn91"; depends=[]; }; linkprediction = derive2 { name="linkprediction"; version="1.0-0"; sha256="0p2abdq6ad689236w2d0khlycpjgy6j7xrlb96ngl6csgxwm07bl"; depends=[igraph intergraph]; }; linkspotter = derive2 { name="linkspotter"; version="1.3.0"; sha256="0fwkbz84vq0v5n5xgv1n99ph7qdz08hjj46ac4q293zarg1xk328"; depends=[dplyr energy ggplot2 infotheo mclust minerva pbapply rAmCharts shiny shinybusy tidyr visNetwork]; }; linl = derive2 { name="linl"; version="0.0.4"; sha256="1wq0wm3k12sfvg0nzdsdxb4qc79kny7qvckxplfgaj6y62vcjxxl"; depends=[knitr rmarkdown]; }; linne = derive2 { name="linne"; version="0.0.2"; sha256="19x13hf3skvxihlpa8wy05vlc94yv7nfs8b1pr8br76wk1xdkjvx"; depends=[cli magrittr purrr R6 rlang shiny]; }; - linpk = derive2 { name="linpk"; version="1.0"; sha256="14l3vv507z7x63ziynp07902599syah0icvzq4rxfjf48bf96l63"; depends=[mvtnorm]; }; + linpk = derive2 { name="linpk"; version="1.1.1"; sha256="0bii49b19kf50gbnv2am7kwy2gb9gkxv8vplcwlmm6k9b4gw9pjb"; depends=[mvtnorm]; }; linprog = derive2 { name="linprog"; version="0.9-2"; sha256="1ki14an0pmhs2mnmfjjvdzd76pshiyvi659zf7hqvqwj0viv4dw9"; depends=[lpSolve]; }; - lintools = derive2 { name="lintools"; version="0.1.3"; sha256="1wv94j0j89zq15b80x0cylfxar5ajrdrcdn62mkgjij3m8zqs7fa"; depends=[]; }; + lintools = derive2 { name="lintools"; version="0.1.5"; sha256="08n4nrrpp9k39f8zl75zn88gk3wdm3cvfsxcp4jzpwhlzz9v5bh9"; depends=[]; }; lintr = derive2 { name="lintr"; version="2.0.1"; sha256="14yfh641afg6griaadbdciyr3k94fl55s055qwzghgk5gdsj61zy"; depends=[codetools crayon cyclocomp digest httr jsonlite knitr rex rstudioapi testthat xml2 xmlparsedata]; }; lipidomeR = derive2 { name="lipidomeR"; version="0.1.2"; sha256="1a9zi821mn7w18lg7psc9bagi3c5snvwqgda2f10rw5jff60fkfd"; depends=[BiocManager dplyr ggplot2 knitr limma reshape2 shadowtext stringr tableone tidyr]; }; liqueueR = derive2 { name="liqueueR"; version="0.0.1"; sha256="0rpjib0dz39la63gy9bw9gmdfq2fcx40y4y4wcb6ky41qcjdp1nd"; depends=[itertools]; }; - liquidSVM = derive2 { name="liquidSVM"; version="1.2.4"; sha256="1fka0jbc200n0il1qbp5nb9819afi11b1ndwqpsd6bhfjgrcga8m"; depends=[]; }; lira = derive2 { name="lira"; version="2.0.1"; sha256="10bjmapnlw5z5cnbdpkwisvjkmk7zi9xqrvgmb5psj317zcxfc2p"; depends=[coda rjags]; }; lisa = derive2 { name="lisa"; version="0.1.2"; sha256="05hijs66jfyr68yvmm1dn262p1k6y4q7f2zvqkfagcb483rhwi53"; depends=[tibble]; }; lisp = derive2 { name="lisp"; version="0.1"; sha256="025sq46277q9i21189cbmx5dnrh5wfshc5k6la1wjilhr1iqf6nj"; depends=[]; }; @@ -10587,8 +10991,9 @@ in with self; { listWithDefaults = derive2 { name="listWithDefaults"; version="1.2.0"; sha256="1rv9jq9zlr5dm08mimba6ni2p5vkfybrgrqk1alm7y6mqpx56byp"; depends=[assertthat]; }; listarrays = derive2 { name="listarrays"; version="0.3.1"; sha256="0nfpqywq9pl9yj566y0jw0h89g0ppsc614538ns1jc3l5r2myils"; depends=[]; }; listcomp = derive2 { name="listcomp"; version="0.3.0"; sha256="09dazc1s06f2pk696jc64lnhs007hqrjjx6z2m6rrswp8yq1p2p2"; depends=[digest rlang]; }; + listcompr = derive2 { name="listcompr"; version="0.2.0"; sha256="11m63zkbm6b4cv5vppjmy1dg4vs0s2kb4fpalng7kji6k16fnjcn"; depends=[]; }; listdown = derive2 { name="listdown"; version="0.4.1"; sha256="1i7vx71nc3vig73kxwaccdgjr91pa3sbl886qppqz4i3ns3z5vgr"; depends=[crayon yaml]; }; - listdtr = derive2 { name="listdtr"; version="1.0"; sha256="08drps03nndpdxswyv8bjm1bcckjav5pjj7fdx3dzyn0v4dfy619"; depends=[ggplot2]; }; + listdtr = derive2 { name="listdtr"; version="1.1"; sha256="13p27cx2w3qb1rcizrva2ib7x7sm310gasi7n5pvvd8rkpwaypzq"; depends=[ggplot2]; }; listenv = derive2 { name="listenv"; version="0.8.0"; sha256="0ps8bk7zlhbviawrw7vw25skjq81hkk3ijyi6g74dmfqy8zsyapx"; depends=[]; }; listviewer = derive2 { name="listviewer"; version="3.0.0"; sha256="0zirxdj58h43062f68h6nqcgmpnvdglxx3kjbs4i4k0z9wvqhx8r"; depends=[htmltools htmlwidgets shiny]; }; liteq = derive2 { name="liteq"; version="1.1.0"; sha256="0w3w9f6374qwvlrqknavqh9b38n5q1r6aw5zmz5lahvadalwdbwi"; depends=[assertthat DBI rappdirs RSQLite]; }; @@ -10597,9 +11002,9 @@ in with self; { liureg = derive2 { name="liureg"; version="1.1.2"; sha256="1zhc5fs47whjvvwwiivykxfchzbjbldyvdmqh9rp7ccwba2q3956"; depends=[]; }; live = derive2 { name="live"; version="1.5.13"; sha256="1s6yrbwlc4wqszl2yvy1x6d93my18ba8sm8pwfy547cd1x055vig"; depends=[breakDown data_table dplyr e1071 forestmodel ggplot2 gower MASS mlr shiny]; }; livechatR = derive2 { name="livechatR"; version="0.1.0"; sha256="1k0z6q3s9iw962m1lwlx45p95flzl5jg1xh6ng426v9jh1yyrbb2"; depends=[data_table dplyr jsonlite magrittr purrr]; }; - liver = derive2 { name="liver"; version="1.3"; sha256="0xf5r3yknxk7xwjxc9izif0ah6j5kqvn3jghx839h3zh08ral9fg"; depends=[class]; }; + liver = derive2 { name="liver"; version="1.7"; sha256="1bw0py3mmx1ajrgzhm8nz85ns6fsrmwgxjxzqs44zqy6p5cxg12w"; depends=[class ggplot2]; }; ljr = derive2 { name="ljr"; version="1.4-0"; sha256="0jby94ml8w6pwnxbmv6qfjww2myvvnn9vrmlqpdh71dhgp3z35py"; depends=[]; }; - llama = derive2 { name="llama"; version="0.9.3"; sha256="1jfypycivih5rps7gik6wk3zqlz2rl14kdib7j513ahs4l261hbx"; depends=[BBmisc checkmate ggplot2 mlr parallelMap plyr rJava]; }; + llama = derive2 { name="llama"; version="0.10.1"; sha256="1rw4lbz172hwb24r424qq86bw7m3xxl66k474wx1scpcrsix2nzw"; depends=[BBmisc checkmate data_table ggplot2 mlr parallelMap plyr rJava]; }; llbayesireg = derive2 { name="llbayesireg"; version="1.0.0"; sha256="0jhkmrjkqfm1flwsbpv6060j6g7cj4ngm0drvrlvsiqpni0k96mh"; depends=[coda ggplot2 llogistic MASS MCMCpack Rcpp rstan StanHeaders]; }; lle = derive2 { name="lle"; version="1.1"; sha256="09wq7mzw48czp5k0b4ij399cflc1jz876fqv0mfvlrydc9igmjhk"; depends=[MASS scatterplot3d snowfall]; }; lllcrc = derive2 { name="lllcrc"; version="1.2"; sha256="06n1fcd3g3z5rl2cyx8jhyscq9fb52mmh0cxg81cnbmai3sliccb"; depends=[combinat data_table plyr VGAM]; }; @@ -10607,12 +11012,13 @@ in with self; { lm_beta = derive2 { name="lm.beta"; version="1.5-1"; sha256="0p224y9pm72brbcq8y1agkcwc82j7clsnszqzl1qsc0gw0bx9id3"; depends=[]; }; lm_br = derive2 { name="lm.br"; version="2.9.3"; sha256="1xadz0rygm58igk0ig0w45132gnsvjxvwqzca4m6v6i6lz9x55pf"; depends=[Rcpp]; }; lmPerm = derive2 { name="lmPerm"; version="2.1.0"; sha256="1ss2hcfxqvfq4n6hypv7jp0n0apby9payxzaswaysr5368lkidn3"; depends=[]; }; - lmSubsets = derive2 { name="lmSubsets"; version="0.5-1"; sha256="1m2hqy2issbp8y0saas21q9dvwqlrdqrzbmmz64rk1gjnjsaq4ch"; depends=[]; }; + lmQCM = derive2 { name="lmQCM"; version="0.2.3"; sha256="0zld7gyng9kk3np62j8xfg951gvgsq2r8x3zmjfr2ykalw36kx5d"; depends=[Biobase genefilter progress]; }; + lmSubsets = derive2 { name="lmSubsets"; version="0.5-2"; sha256="1afdpcp3qiiprzc47cbckf49jd3f8ip81441ghgx0kfx54d1m305"; depends=[]; }; lmSupport = derive2 { name="lmSupport"; version="2.9.13"; sha256="0ln5c91mbxkymgnv2nw5m3nrm5bwckpikgb9x1qhmjc55m98wkb8"; depends=[AICcmodavg car gplots gvlma lme4 pbkrtest psych pwr]; }; lmboot = derive2 { name="lmboot"; version="0.0.1"; sha256="1v7a3vlv0187mpg3y3pj7f3pbk1v5n6amw732chy10vdw5nmfkwd"; depends=[evd]; }; lmds = derive2 { name="lmds"; version="0.1.0"; sha256="130azb0nc2wwxv0qi8v5s4rd02p9lc92zwn634pv7b8awbw81i65"; depends=[assertthat dynutils irlba Matrix]; }; lme4 = derive2 { name="lme4"; version="1.1-26"; sha256="0ls2krph4pfjn45vf9fn3ln3x98s85wxrkvm5pnxyx55n1pnsjrn"; depends=[boot lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen statmod]; }; - lmeInfo = derive2 { name="lmeInfo"; version="0.1.2"; sha256="0f9q2wqp0qxmrnh3whx4dcb4wd7lj275jx7yb0f5wcv0n0sksfpp"; depends=[nlme]; }; + lmeInfo = derive2 { name="lmeInfo"; version="0.1.3"; sha256="1y75dv90jj8jzz4z4iixbv7ipbdx9f7wrjbjj46a8wjiidj1l5zw"; depends=[nlme]; }; lmeNB = derive2 { name="lmeNB"; version="1.3"; sha256="03khn9wgjbz34sx0p5b9wd3mhbknw8qyvyd5pvllmjipnir63d3q"; depends=[lmeNBBayes numDeriv statmod]; }; lmeNBBayes = derive2 { name="lmeNBBayes"; version="1.3.1"; sha256="13shfsh9x6151xy8gicb25sind90imrwclnmfj96b76p5dvhzabm"; depends=[]; }; lmeSplines = derive2 { name="lmeSplines"; version="1.1-10"; sha256="0fy6hspk7rqqkzv0czvvs8r4ishvs7zsf4ykvia65nj26w7yhyia"; depends=[nlme]; }; @@ -10620,10 +11026,9 @@ in with self; { lmec = derive2 { name="lmec"; version="1.0"; sha256="09shj01h2dl5lh7ch0wayr7qyhlmk0prv3p1vfgy91sn0wpbqlxr"; depends=[mvtnorm]; }; lmem_qtler = derive2 { name="lmem.qtler"; version="0.1.1"; sha256="0qbllj66y294n1m8dsyrnwyvzscbzg8mb2dmjyghcrfaz925vkin"; depends=[lattice lme4 pastecs qtl stringr]; }; lmerTest = derive2 { name="lmerTest"; version="3.1-3"; sha256="1zd8gqjkazhxgpnnr484xwsq30p62fq8592nzyc171zjyplpbaim"; depends=[ggplot2 lme4 MASS numDeriv]; }; - lmeresampler = derive2 { name="lmeresampler"; version="0.1.1"; sha256="13i0crk6agw5pcj3znvxj60jfsmncnir7ahwdczgm7kh08hk0f6l"; depends=[boot dplyr Matrix nlmeU plyr RLRsim]; }; + lmeresampler = derive2 { name="lmeresampler"; version="0.2.0"; sha256="1qjxv3vrgw183hvya2k4qidnnx9w64lcksjm6v727kcigl3x9h1f"; depends=[catchr dplyr forcats ggdist ggplot2 HLMdiag magrittr Matrix nlmeU purrr statmod]; }; lmf = derive2 { name="lmf"; version="1.2"; sha256="1xqlqmjl7wf5b2s2a1k1ara21v74b3wvwl4mhbj9dkdb0jcrgfva"; depends=[]; }; lmfor = derive2 { name="lmfor"; version="1.5"; sha256="1r301ajcp9ag23n0nw1rgwg8ss5cvinwqargbdg0jpqbhdrgaq7y"; depends=[magic nlme spatstat]; }; - lmkCHK = derive2 { name="lmkCHK"; version="1.0.0"; sha256="0ipz8xvwrw285cdwjpqd1ax7hq180l5npdfarr2qc394jb2rgb1w"; depends=[geomorph Morpho rgl shiny]; }; lmm = derive2 { name="lmm"; version="1.3"; sha256="13b5rvdbzljir1fn4zxv2lshbga64vwzn6884izif9v5dkd5b29j"; depends=[]; }; lmmot = derive2 { name="lmmot"; version="0.1.4"; sha256="1a8msh9yvvd7cv1zxlxdv8arlfvxqghxzcxls23v6ifl5jf4d1p3"; depends=[MASS maxLik]; }; lmmpar = derive2 { name="lmmpar"; version="0.1.0"; sha256="1l3zjmlfjfn2wv4yayqzv6qrwaxk2sgx3hjx371b5fs54zspdj20"; depends=[bigmemory doParallel MASS matrixcalc mnormt plyr]; }; @@ -10635,20 +11040,22 @@ in with self; { lmreg = derive2 { name="lmreg"; version="1.2"; sha256="02a4nqqcfkjlq21mpk8abd4lj4ib2nps3ndf7zgmzygkd1z0df18"; depends=[MASS]; }; lmridge = derive2 { name="lmridge"; version="1.2"; sha256="091rznzh77bmsv7sw9xmsq6s9pnljyq7qyl74kgcxss718134jr3"; depends=[]; }; lmtest = derive2 { name="lmtest"; version="0.9-38"; sha256="0sr19bmw2cpagfvwg772m79wvl1i2hww1xfr69bzr3rr8pm2r8ij"; depends=[zoo]; }; - lmtp = derive2 { name="lmtp"; version="0.0.5"; sha256="1bw6sr9hg770w3v26in4hhayi1ghqpxk7za005h65dy6krwkrfhn"; depends=[cli future generics nnls origami progressr R6 slider]; }; + lmtp = derive2 { name="lmtp"; version="0.9.0"; sha256="0xwpcbbq5jbm868svmwlfplh43ydqj8ziphyrrzqkwsdfgd5016m"; depends=[cli data_table future generics nnls origami progressr R6 SuperLearner]; }; lmvar = derive2 { name="lmvar"; version="1.5.2"; sha256="0wrny8yzk5y4mzpri6xv5wibbnbaxm0195lcbk5jrl5l5gs99bn6"; depends=[Matrix matrixcalc maxLik]; }; lmviz = derive2 { name="lmviz"; version="0.2.0"; sha256="0sl2k02m5bxkb4jg8y666ln0xxhr4dhsfz9hlp55p9smlhycl5s2"; depends=[car lmtest MASS mgcv rgl scatterplot3d shiny shinyjs]; }; lncDIFF = derive2 { name="lncDIFF"; version="1.0.0"; sha256="012dwrcp0pny59hvzj7mnyyc3nijcjgxc0dyx7ab2fknp9bhs5w8"; depends=[]; }; - loa = derive2 { name="loa"; version="0.2.45.4"; sha256="0dcpadv453885a2s8l064zn1xswi2v819154j822jr22kd7bj57v"; depends=[lattice MASS mgcv plyr png RColorBrewer rgdal RgoogleMaps sp]; }; - loadr = derive2 { name="loadr"; version="0.1.2"; sha256="1zqg90hxw6c3k3gd0caj8fh5ym3f97gsr9cvi6ndlzqh4957cd5n"; depends=[]; }; + loa = derive2 { name="loa"; version="0.2.47.1"; sha256="1xzcf3cvk3zrlqknrw5j19g7z4lw74ahw7cwavx7c9b007kk7f5c"; depends=[lattice MASS mgcv OpenStreetMap plyr png RColorBrewer rgdal RgoogleMaps sp]; }; + loadr = derive2 { name="loadr"; version="0.1.3"; sha256="01nsjsv7c8grsizfisczqwjrz5saff0pgn7716ig4i8nzargvz7a"; depends=[]; }; lobstr = derive2 { name="lobstr"; version="1.1.1"; sha256="0vkif17825x33cz8r89j0qph4wj5l8fzfgl8nh2g7m2v140cxjdq"; depends=[crayon Rcpp rlang]; }; - locStra = derive2 { name="locStra"; version="1.6"; sha256="1jwxhfghis2k9pckqdnaffm10y9nv80ns7jpbfmhgmcava16ilsf"; depends=[Matrix Rcpp RcppEigen Rdpack RSpectra]; }; + locStra = derive2 { name="locStra"; version="1.7"; sha256="0pvxifzhafhb0iv2d9ar90j2436zjgdzav0dyjir7xrc4s597bxk"; depends=[Matrix Rcpp RcppEigen Rdpack RSpectra]; }; localFDA = derive2 { name="localFDA"; version="1.0.0"; sha256="099hqnd0q4ylg03qi7icc6a9w1x7p76vlv5wxk8f53l7y9pp27b3"; depends=[]; }; localICE = derive2 { name="localICE"; version="0.1.1"; sha256="1pyq6kdahsy9qa0jzmring48r0i9h4rkp8lxpf9afksgm1qn0c5z"; depends=[checkmate ggplot2]; }; localIV = derive2 { name="localIV"; version="0.3.1"; sha256="1z3q5hk6qfc1pzqdrxwm8y3am27648lfz66lm84bf8abifw4kk60"; depends=[KernSmooth mgcv rlang sampleSelection]; }; localModel = derive2 { name="localModel"; version="0.3.12"; sha256="1yg61zia8gqgzbg33k6q43ni04cj6y9l3k8vdcw8j1qzasnhz0b2"; depends=[ggplot2 glmnet ingredients partykit]; }; + localScore = derive2 { name="localScore"; version="1.0.6"; sha256="0s1ral5ph4ir2a7vl4ii8wkp3j3lg0c1lsa94z72xqdkbibg5q6d"; depends=[Rcpp]; }; localgauss = derive2 { name="localgauss"; version="0.40"; sha256="0y0pcg2i7lr4wipxawn06hy0q11znhcn2ah6rqwnlyy8pab70pyq"; depends=[foreach MASS matrixStats]; }; localsolver = derive2 { name="localsolver"; version="2.3"; sha256="1d18rihzqf1f5j9agfp8jysll7lqk1ai23hkdqkn6wwxj442llv4"; depends=[]; }; + locatexec = derive2 { name="locatexec"; version="0.1.0"; sha256="1137m4bqgi0bbp7hnk1bicg83jxgjqa18xhbjmx6lfs3d7pzk2i4"; depends=[]; }; locationgamer = derive2 { name="locationgamer"; version="0.1.0"; sha256="0y99m003s177x57m4ynxd8jd2xzl5zb4bj7jnbc04h22ffdl6m6f"; depends=[]; }; locfdr = derive2 { name="locfdr"; version="1.1-8"; sha256="1falkbp2xz07am8jlhwlvyqvxnli4nwl188kd0g58vdfjcjy3mj2"; depends=[]; }; locfit = derive2 { name="locfit"; version="1.5-9.4"; sha256="1vcw16qww4v4547w0gfvhqg60l051bsdlxa6zfcgcj9xbxf6dlyr"; depends=[lattice]; }; @@ -10660,6 +11067,7 @@ in with self; { lodr = derive2 { name="lodr"; version="1.0"; sha256="0bmdw489dv1069krnx9yi0bcgx1vx4ymc6s4pix4shha5c5fbiz4"; depends=[Rcpp RcppArmadillo Rdpack]; }; loe = derive2 { name="loe"; version="1.1"; sha256="1n16pgfxg9vcn729xxjbbvavg2ywbdcch9v2ph8nv3z7psc0q46c"; depends=[MASS]; }; loewesadditivity = derive2 { name="loewesadditivity"; version="0.1.0"; sha256="0j9vvh2ys09hy2k3mbrlf0p493ymrxvfsdcjw0p6rlls54z9lqqc"; depends=[dplyr ggplot2 gridExtra magrittr metR rlang rootSolve tidyr viridis]; }; + log = derive2 { name="log"; version="1.1.0"; sha256="04cl8qb2ivdili89h4cghcjqywpkz85v48g2vkg6hdlimcd63wff"; depends=[cli crayon R6]; }; log4r = derive2 { name="log4r"; version="0.3.2"; sha256="18r5g0817wfn0kmqwv6vf7r2vavi0xh6mqmxrh59y9w3c84npfhl"; depends=[]; }; logKDE = derive2 { name="logKDE"; version="0.3.2"; sha256="09gachibj0klqa9ijw572lwphbh9qj6zqray5byq1dh7zsiq516q"; depends=[pracma Rcpp]; }; logNormReg = derive2 { name="logNormReg"; version="0.3-0"; sha256="172d0y9rb7j0d3m7d22ycfip6s8hk8hlp9810d7r95ra5dr5dx8z"; depends=[]; }; @@ -10669,9 +11077,9 @@ in with self; { logcondens = derive2 { name="logcondens"; version="2.1.5"; sha256="1sq27klnphp74hq0l0460m9bb7lrl06mpgkg4qq8iciy3yy1mrkj"; depends=[ks]; }; logcondens_mode = derive2 { name="logcondens.mode"; version="1.0.1"; sha256="1i2c2prk5j863p3a3q3xnsv684igfi5czz3dib7zfjldpf0qyaq7"; depends=[distr logcondens]; }; logcondiscr = derive2 { name="logcondiscr"; version="1.0.6"; sha256="08wwxsrpflwbzgs6vb3r0f52hscxz1f4q0xabr1yqns06gir1kxd"; depends=[cobs Matrix mvtnorm]; }; - logger = derive2 { name="logger"; version="0.1"; sha256="00gfy2i58qn5na8cxxrkm1pvsw85xx2gdk0y6dzxhcjfx3wyplaw"; depends=[]; }; + logger = derive2 { name="logger"; version="0.2.0"; sha256="01ggaxcmcp06qb8yfkz6zjbhmal3cyj192g2zx70x4dgmynhwrbr"; depends=[]; }; logging = derive2 { name="logging"; version="0.10-108"; sha256="13gd40ygx586vs6xcp6clg69a92aj8zxlk1rn3xzkx8klfjimjc5"; depends=[]; }; - loggit = derive2 { name="loggit"; version="2.1.0"; sha256="1ikzrzqsmn8436dimr88mdmvpqmq5wxfjdiy4hj5939wjnx4jnnm"; depends=[]; }; + loggit = derive2 { name="loggit"; version="2.1.1"; sha256="1fkr2fnfazxhm3pq0gysxhz6aqsdx38d017y0xbmlsg9hfgfx6q1"; depends=[]; }; logiBin = derive2 { name="logiBin"; version="0.3"; sha256="06y5bqm3j6xdr1cd607v2sqkghnd2bv6bvxc6cz8dvp8jabqa0zm"; depends=[data_table doParallel foreach iterators partykit]; }; logib = derive2 { name="logib"; version="0.1.0"; sha256="0n15rsqlnqnwx9wc5wr78c6qpzwwnp8xcdlyffjqv56gjdqa1420"; depends=[lubridate readxl]; }; logihist = derive2 { name="logihist"; version="1.0"; sha256="1q3322rh3g31c5i80aw54pln0m1jgxmbx30cn31nlh3ijkvnpq9a"; depends=[ggplot2]; }; @@ -10679,13 +11087,14 @@ in with self; { logistic4p = derive2 { name="logistic4p"; version="1.5"; sha256="0h0dxyklqc95ykyril1a3d2bdnszj5l9dqbxzh2wbfmk06prvh8b"; depends=[MASS]; }; logisticPCA = derive2 { name="logisticPCA"; version="0.2"; sha256="07ikyn127ld0fjdw7x911wrswqwqpw4lbcz0iffvh6jfjkgyk341"; depends=[ggplot2]; }; logisticRR = derive2 { name="logisticRR"; version="0.3.0"; sha256="0i9x7rynxcybdnjqbjsny8jsl96mivzdazdgmcg72qrv8qfwpszl"; depends=[nnet]; }; - logitnorm = derive2 { name="logitnorm"; version="0.8.37"; sha256="1a9plxsxy29j9xpvwsznbbj150h9daay5zfzlmkh5y0f7f15w3a9"; depends=[]; }; + logitnorm = derive2 { name="logitnorm"; version="0.8.38"; sha256="01svs20dr0f1h66j5vn3ychjlgwzak96f8p9lmzd29anjlkm9x9q"; depends=[]; }; + logitr = derive2 { name="logitr"; version="0.1.0"; sha256="08q58h88b6limqcj152jh66pywrhm0r22cqpcg4rxnl3pbm0djsa"; depends=[MASS nloptr randtoolbox]; }; loglognorm = derive2 { name="loglognorm"; version="1.0.1"; sha256="0rhx769a5nmidpbpngs2vglsbkpgw9badz3kj3jfmpj873jfnbln"; depends=[]; }; logmult = derive2 { name="logmult"; version="0.7.3"; sha256="10dmvvwlaw8dn6h0343d8apn7rlc2b8nys3f38x9wlvd9xhhlwxm"; depends=[gnm qvcalc]; }; - lognorm = derive2 { name="lognorm"; version="0.1.6"; sha256="05a6djz06jblnx51x2r5gwb57l4wq6giz6kknsslzsl64xj275z1"; depends=[Matrix]; }; - logr = derive2 { name="logr"; version="1.1.1"; sha256="0a0hpcs26byj3fgssk4v06na066jqfrdgr7zwamxj3z243106y8h"; depends=[]; }; + lognorm = derive2 { name="lognorm"; version="0.1.9"; sha256="0mx7wgqpiprwvh5srf8z9f8glz2kgh8l15b2pydb4bvqx1m54kxa"; depends=[Matrix]; }; + logr = derive2 { name="logr"; version="1.2.1"; sha256="1qwssi41a261070xyabs2h6i5nl9jfc8czg4mnjdzwp9nrdy2xz9"; depends=[]; }; logspline = derive2 { name="logspline"; version="2.1.16"; sha256="12hkdi77vkic05p2vhap025xdcg1n53ywm239v18713pihdlj63l"; depends=[]; }; - lokern = derive2 { name="lokern"; version="1.1-8.1"; sha256="1z9bg10ppj0gpsazdh2mcbbd374075bm30p9dmr71mb87vxrk2r3"; depends=[sfsmisc]; }; + lokern = derive2 { name="lokern"; version="1.1-9"; sha256="1fms79bb4y6ryzmxhpc544zh52xgd879gpcigc24bjhd7whl9nry"; depends=[sfsmisc]; }; lolR = derive2 { name="lolR"; version="2.1"; sha256="0lrmn9lzyyfr1y0i7qp6xfpdxyisbkajwg0jkrqkiw687psnh2rc"; depends=[abind ggplot2 irlba MASS pls robust robustbase]; }; lolog = derive2 { name="lolog"; version="1.2"; sha256="1vd80ngq4558ahan1vhsql0wc578imm13fgrrgnzlrd91xncnnjf"; depends=[BH ggplot2 intergraph Matrix network Rcpp reshape2]; }; lomb = derive2 { name="lomb"; version="1.2"; sha256="09cp9c33x14b4did8baq3hi0b3rb2nhasjz7aav03031c0fq07zj"; depends=[]; }; @@ -10693,40 +11102,42 @@ in with self; { longROC = derive2 { name="longROC"; version="1.0"; sha256="1fs11vqi4hy99d7shzzdvd6ic5gay6rh2027w6j0qpd04n8q88m8"; depends=[survival]; }; longRPart2 = derive2 { name="longRPart2"; version="0.2.3"; sha256="1vqcsxi6c4hqrpk3ns7yhghfryin1psxl38qkz2xz8cvyn58f685"; depends=[formula_tools ggplot2 MASS nlme rpart]; }; longclust = derive2 { name="longclust"; version="1.2.3"; sha256="1g45d5pak2vhbjrcmxxrk9jyrdxkqwy45phzpsw6b2bjyrgr4i7g"; depends=[]; }; + longit = derive2 { name="longit"; version="0.1.0"; sha256="08d7pfwd2anx6cdgpyzrn5na3s75z6plbxb11774zcxyzg81rz69"; depends=[AICcmodavg missForest R2jags rjags]; }; longitudinal = derive2 { name="longitudinal"; version="1.1.12"; sha256="1d83ws28nxi3kw5lgd5n5y7865djq7ky72fw3ddi1fkkhg1r9y6l"; depends=[corpcor]; }; longitudinalData = derive2 { name="longitudinalData"; version="2.4.1"; sha256="0lnvcfgj721bawl1ciz0jw83mfsnzkhg6jn824vr3qdm4rbib2vd"; depends=[class clv misc3d rgl]; }; longitudinalcascade = derive2 { name="longitudinalcascade"; version="0.3.2.1"; sha256="03nqglxyz6qfalxdnyh2aarxv3agn0b3r4nhsji4v9703h4m1fvg"; depends=[dplyr ggplot2 lubridate rlang scales survival tidyr zoo]; }; longmemo = derive2 { name="longmemo"; version="1.1-2"; sha256="01rj5x9cgscsrakbx9155mbvs35fd3j484cfz5cds9vl521fjr3r"; depends=[]; }; - longpower = derive2 { name="longpower"; version="1.0-21"; sha256="0095jml46lchyp17gsqpjabq80xjddlvd4ir8y2jsg8sgd3pc8vs"; depends=[lme4 nlme]; }; + longpower = derive2 { name="longpower"; version="1.0.23"; sha256="0fxs3zaciyydl3w0a4d5pi8bbr8yhmh17wi0n39j073pacvzmqf6"; depends=[lme4 nlme]; }; longurl = derive2 { name="longurl"; version="0.3.3"; sha256="16r6gzyfy7aq8sqdzvc6wqinfp0yj46bsz4yg8n3jf0jdyx0zrc8"; depends=[httr]; }; loo = derive2 { name="loo"; version="2.4.1"; sha256="0l2v8zpashqbnck3qx5lp1gqjcfphzky8mxyw5gfk9wk99mzn8dw"; depends=[checkmate matrixStats]; }; + lookout = derive2 { name="lookout"; version="0.1.0"; sha256="16pny894diircf7w8b7kmmjpp8j864dj9iivh1n41aafjml4xk8g"; depends=[evd ggplot2 RANN TDAstats tidyr]; }; + lookup = derive2 { name="lookup"; version="1.0"; sha256="0ncmj1df64088qv0g2c0wd8n43qmi15358mz289hakg6z4h0dmyi"; depends=[]; }; lookupTable = derive2 { name="lookupTable"; version="0.1"; sha256="0ipy0glrad2gfr75kd8p3999xnfw4pgpbg6p064qa8ljqg0n1s49"; depends=[data_table dplyr]; }; - loon = derive2 { name="loon"; version="1.3.1"; sha256="0l9cz4cw8i329rajz9vlm54ajxwx899h9jp9yqjr92ijh2x3il6d"; depends=[gridExtra]; }; + loon = derive2 { name="loon"; version="1.3.4"; sha256="04pwnsc6k2wqhww329zvjsi6yb0l2gh3951m558nxkz7nx0cpjj3"; depends=[gridExtra]; }; loon_data = derive2 { name="loon.data"; version="0.1.1"; sha256="0gcplk8qx6qm36cnxvvka1rfsjd38bhlnjvx405h0z9ivwlidsc5"; depends=[]; }; - loon_ggplot = derive2 { name="loon.ggplot"; version="1.0.1"; sha256="161i99nm5csfq7wvr941a4dr544b1qwma0zlnrlcsbsnixyk3a0w"; depends=[dplyr GGally ggplot2 gridExtra loon magrittr rlang stringr]; }; + loon_ggplot = derive2 { name="loon.ggplot"; version="1.1.0"; sha256="11s61ci5mv28dqfx7v9wzz2sszn2290bz67lpkzmgnzghbsn8bhl"; depends=[GGally ggmulti ggplot2 gridExtra loon rlang scales]; }; loop = derive2 { name="loop"; version="1.1"; sha256="1gr257fm92rfh1sdhsb4hy0fzwjkwvwm3v85302gzn02f86qr5dm"; depends=[MASS]; }; - loose_rock = derive2 { name="loose.rock"; version="1.0.16"; sha256="0vk9zmiy730c1d397v5p7v8ywjv1wv9vabmhdjyrfdx7bijfy57m"; depends=[digest dplyr futile_options ggplot2 MASS reshape2]; }; + loose_rock = derive2 { name="loose.rock"; version="1.2.0"; sha256="13p3mp8m2in3cbcwgj42hgzrwxmgalc2v0z3r1zn1n77iqjvcd7r"; depends=[digest dplyr futile_options ggplot2 httr MASS reshape2]; }; lordif = derive2 { name="lordif"; version="0.3-3"; sha256="1yby9fvzdi1dzvzp6d6h144k1p9nfacd8l5bd66dmhnc8sp2nlx5"; depends=[mirt rms]; }; lorec = derive2 { name="lorec"; version="0.6.1"; sha256="0mgypd8awixh1lzbh5559br4k7vi3pfmwniqhgh68wc06sc6bn65"; depends=[]; }; lorentz = derive2 { name="lorentz"; version="1.0-5"; sha256="1py2s4x6vnlyyf5fnwbhws00dmf5qyzmx8wza337w3nzxkr6ns6b"; depends=[emulator magic magrittr tensor]; }; lorenz = derive2 { name="lorenz"; version="0.1.0"; sha256="1zclxjr1ya4rc48hm8a1s6ayr4yvjydgwwsi4fwg3qqf4mspa2dl"; depends=[dineq magrittr]; }; lori = derive2 { name="lori"; version="2.2.2"; sha256="1153ilp1i849rwbbms4vfc6c1mxgpav04zfqm2sdj7s63nvknx6r"; depends=[data_table rARPACK svd]; }; - lotri = derive2 { name="lotri"; version="0.2.2"; sha256="069by47cw38pwa70fjy7p1pi1pany04p1idjkifdyblmqqdhw0rh"; depends=[]; }; + lotri = derive2 { name="lotri"; version="0.3.1"; sha256="042jbvpaawmfklak56gnmwyp43q9scm539crlv38j8aafik1g2s5"; depends=[]; }; lowmemtkmeans = derive2 { name="lowmemtkmeans"; version="0.1.2"; sha256="08zhdw48rzw47yzhg4s37bkliyngxs46cyb57dvng1s3m0w0dhvi"; depends=[Rcpp RcppArmadillo]; }; lowpassFilter = derive2 { name="lowpassFilter"; version="1.0-0"; sha256="1f05z18nn3184rksmsarfz79bxn3gj760f1z9h5h3agqc180krm3"; depends=[Rcpp]; }; lpSolve = derive2 { name="lpSolve"; version="5.6.15"; sha256="1fpkyjyqykwa1dxnhiky01pm09syxg169lm7hpy39bdbg10vw9s6"; depends=[]; }; lpSolveAPI = derive2 { name="lpSolveAPI"; version="5.5.2.0-17.7"; sha256="1fsmipb97gglihrf424mz063fn67bf55jjahnbh53svkmm2qxg4y"; depends=[]; }; lpbrim = derive2 { name="lpbrim"; version="1.0.0"; sha256="1cbkzl23vgs9hf83ggkcnkmxvvj8867k5b9vhfdrznpqyqv1f2gp"; depends=[Matrix plyr RColorBrewer]; }; lpc = derive2 { name="lpc"; version="1.0.2.1"; sha256="1g1dzm7pcrbrdk1dmhbdhj58j69dzar41al3i8q4gysf3adqzsvv"; depends=[]; }; - lpdensity = derive2 { name="lpdensity"; version="2.1"; sha256="1i3b2c64kfn3k0cflygfnahwr31g0095s5x5zyw8afj7pnmnl94f"; depends=[ggplot2 MASS]; }; + lpdensity = derive2 { name="lpdensity"; version="2.2"; sha256="0ibr4js9iwwnzp872n56xbzap8dpz9zjv4y5alcc8rdh0y55sa7r"; depends=[ggplot2 MASS]; }; lpint = derive2 { name="lpint"; version="2.0"; sha256="0p1np8wlfbax0c7ysc5fs9dai8s00h1v0gan89dbd6bx06307w2r"; depends=[]; }; - lpirfs = derive2 { name="lpirfs"; version="0.1.9"; sha256="102r6avaliw1a8cj8zjn74i40gqfbxwjizplqlp2y9ik5q32g2yg"; depends=[doParallel dplyr foreach ggplot2 ggpubr gridExtra lmtest plm Rcpp RcppArmadillo sandwich]; }; - lplyr = derive2 { name="lplyr"; version="0.1.12"; sha256="1wcab8wwdzpgb61q83gfn2d34vsrd3qa4xyb9sqna6krss1ii1in"; depends=[bazar dplyr lazyeval magrittr]; }; + lpirfs = derive2 { name="lpirfs"; version="0.2.0"; sha256="1jn2faqj7szsfc0bicgym493y4cyncbg93rmcc3yv59b0rbxhc8m"; depends=[doParallel dplyr foreach ggplot2 ggpubr gridExtra lmtest plm Rcpp RcppArmadillo sandwich]; }; lpme = derive2 { name="lpme"; version="1.1.1"; sha256="0si90nkgl8bqk8yvd2igdsrngiwqh8891072pfpzipifnd0f5448"; depends=[decon flexmix locpol Rcpp RcppArmadillo]; }; lpmodeler = derive2 { name="lpmodeler"; version="0.2-1"; sha256="17k67l03dkjx61p4hwswghjm6awk0zx173x9xafxrfd8jrgsf6kf"; depends=[slam]; }; lpridge = derive2 { name="lpridge"; version="1.0-8"; sha256="0jk4l95z9rcdqkc8lpp4sf1mg2dqj67rhqw1iafrxy5lx4jfaqqx"; depends=[]; }; lqmm = derive2 { name="lqmm"; version="1.5.5"; sha256="15kyfpbvdgyxl6gjqinx79zq03axg36qgaqfc6zq4blyjlhj6i3c"; depends=[nlme SparseGrid]; }; - lqr = derive2 { name="lqr"; version="3.31"; sha256="0c7ah2sacgyinzpsffng47zfg27izgjcmvdw4qvbllxgk5kb3jfm"; depends=[MomTrunc numDeriv quantreg spatstat]; }; + lqr = derive2 { name="lqr"; version="3.43"; sha256="1pgqcv585sgzpj856r2d475k21hi6ssv39lmx7cmiyial70m4snp"; depends=[MomTrunc numDeriv quantreg spatstat_geom]; }; lrequire = derive2 { name="lrequire"; version="0.1.3"; sha256="03c8h9v2xhlv7bj5jv117a27gaqaly2kdxs9zyihsm9yh9rg3d79"; depends=[]; }; lrgs = derive2 { name="lrgs"; version="0.5.4"; sha256="0mf6wqlv21z68w81hvpmhgngvdsklf3x2678d9c9lxfmqmpv4a7y"; depends=[mvtnorm]; }; lrmest = derive2 { name="lrmest"; version="3.0"; sha256="1yddkgza672z9y0ipgl92pg9prhmr387zsqf0qbi9k2yzfz2vvs6"; depends=[MASS psych]; }; @@ -10758,9 +11169,9 @@ in with self; { ltsk = derive2 { name="ltsk"; version="1.0.8"; sha256="1ykgz5cas924kmq9ak2j8vhr7gg9s458qarqkmyg9wdfj1srqi7p"; depends=[fields gstat sp]; }; ltsspca = derive2 { name="ltsspca"; version="0.1.0"; sha256="0hgl2zd8y01z8mhnqg1hlv1l7klpwhwk7q8b99pw9vgnh1f2gnfs"; depends=[pracma Rcpp RcppArmadillo]; }; ltxsparklines = derive2 { name="ltxsparklines"; version="1.1.2"; sha256="1jnygg7wm2768lrrzball8rn8f60xy4nc3a18h4d32jpnbhifj13"; depends=[]; }; - lubridate = derive2 { name="lubridate"; version="1.7.9.2"; sha256="0yfvlgksasmia7rsp83lsipjpgvlly5qkldcfxj68lfaz9l2sspf"; depends=[generics Rcpp]; }; + lubridate = derive2 { name="lubridate"; version="1.7.10"; sha256="1s653d6rnpf9bkynxmbq4fdjdcz7r9ma19aph8f5y9ck70his4hm"; depends=[generics Rcpp]; }; lucas = derive2 { name="lucas"; version="1.0"; sha256="1ws35f2pq2y7nnik40nj4qpz1d499gfc5isr1409pwy6r5knb78q"; depends=[DBI plyr rpostgis RPostgreSQL]; }; - lucid = derive2 { name="lucid"; version="1.7"; sha256="0hrb8qlm8g4h1ziwxq7m53pf7g8fxhcb2xryavm6rniqpcx8yb7g"; depends=[nlme]; }; + lucid = derive2 { name="lucid"; version="1.8"; sha256="1dhbyr0l7cp5r0r7xdgqqxlix5hhk0v4v0zghd904dvfyaz2zdwi"; depends=[nlme]; }; ludic = derive2 { name="ludic"; version="0.1.8"; sha256="1yvv3h7arm8hp89j9nr5vdl8ahxcpggi2qq431l7xbw9jka41qdp"; depends=[fGarch landpred Matrix Rcpp RcppArmadillo]; }; lue = derive2 { name="lue"; version="0.2.1"; sha256="0is5rd1dz91bzphmfbbzi3s6rgc5g9qza2r26k70xs67dgn0qbjq"; depends=[ncdf4 raster]; }; lulcc = derive2 { name="lulcc"; version="1.0.4"; sha256="00ymbp20kbjyzrsrxa262y0y7fj4jgsbqf56aapb657xvafxvy5q"; depends=[lattice raster rasterVis ROCR]; }; @@ -10771,15 +11182,18 @@ in with self; { lvec = derive2 { name="lvec"; version="0.2.2"; sha256="0n1l26n4khlalqd0b9bi7vc3kr5jh6mr56ca0rmnnl6bl9742nr5"; depends=[BH Rcpp]; }; lvm4net = derive2 { name="lvm4net"; version="0.3"; sha256="1iq93mrdhymdixnk7y7rkibm3cqljl4y9qkjq4mzkcwcp4960y5q"; depends=[corpcor ellipse ergm glmmML igraph MASS mvtnorm network]; }; lvmcomp = derive2 { name="lvmcomp"; version="1.2"; sha256="08hs97bdz4n0bdhvqqq5xywfy140s69c750rn38criq4cw4gm3z7"; depends=[coda Rcpp RcppArmadillo]; }; + lvmisc = derive2 { name="lvmisc"; version="0.1.1"; sha256="06ry1azfpqdh1hblhnc47n9265dkzhm96rajl8y7xnvqmv6ad8jj"; depends=[cowplot dplyr ggplot2 glue purrr rlang rsample tibble tidyselect vctrs]; }; lvnet = derive2 { name="lvnet"; version="0.3.5"; sha256="1wqqxavs2s0hmlifyaa1jrlc8hj4z72fkgjckkmh9m2r4jp9zy0g"; depends=[corpcor dplyr glasso lavaan Matrix mvtnorm OpenMx psych qgraph semPlot]; }; lvplot = derive2 { name="lvplot"; version="0.2.0"; sha256="01sisj2vbx2yb5w9cjzyaf9j46vh4kkw05xccq1f7wmsg69zmj6b"; depends=[ggplot2 RColorBrewer]; }; - lwgeom = derive2 { name="lwgeom"; version="0.2-5"; sha256="0byhjqa2acns8mznl1ngnfygxxxyszvnq66qfg0smhhhdkwr67aa"; depends=[Rcpp sf units]; }; + lwgeom = derive2 { name="lwgeom"; version="0.2-6"; sha256="1733iwinn426bcmgjxp4j0scvbz35rvqkanmw7g7f47l6j7w14vn"; depends=[Rcpp sf units]; }; + lwqs = derive2 { name="lwqs"; version="0.5.0"; sha256="11hkz3b3sgm6v30gwaq463klljjf6c4qx26a5ccc1wl6r439gxqp"; depends=[data_table gamm4 ggplot2 gridExtra gWQS plyr]; }; lxb = derive2 { name="lxb"; version="1.5"; sha256="16x1mvhxqhvibzmv6mlqcmkgic2sha1xagf7r2azmn4z8x1m9w6n"; depends=[]; }; lymphclon = derive2 { name="lymphclon"; version="1.3.0"; sha256="1jns41sk2rx1j3mg06dzy434k30gpfhbkn6s47fmyv1y8701vfl0"; depends=[corpcor expm MASS]; }; m2b = derive2 { name="m2b"; version="1.0"; sha256="0agzw67mmwrw1f61yn24z5w1pgjssdapg3li0a53i3ylnij45mzr"; depends=[caret caTools e1071 geosphere ggplot2 randomForest]; }; m2r = derive2 { name="m2r"; version="1.0.2"; sha256="0vwvpalap4z5x2004c92n0ka7i4l64ry5n8pmxs4vjpd8fyx91gc"; depends=[gmp memoise mpoly Rcpp stringr usethis]; }; + m61r = derive2 { name="m61r"; version="0.0.2"; sha256="0l2c2b6bvf79lrw586vfj3nrw9l9w8zk1hfhg3iqb50ql02c95an"; depends=[]; }; mAr = derive2 { name="mAr"; version="1.1-2"; sha256="0i9zp8n8i3fxldgvwj045scss533zsv8p476lsla294gp174njr7"; depends=[MASS]; }; - mBvs = derive2 { name="mBvs"; version="1.3"; sha256="0vxwdi45pd79c3lz507wlw2alvf501q27lwvd34j6y68p3vyv1vj"; depends=[]; }; + mBvs = derive2 { name="mBvs"; version="1.4"; sha256="1dljdz6kicfnwlx2rxlxgbvi3z9g3dizgrp6zza7mz9djykhdc60"; depends=[]; }; mDAG = derive2 { name="mDAG"; version="1.2.2"; sha256="0k85sl0jmpcpiz92cz6x3kd8jc6yyfv9z4wm1kyaikcf5q4qlad4"; depends=[bnlearn logistf mgm nnet pcalg Rcpp RcppArmadillo]; }; mExplorer = derive2 { name="mExplorer"; version="1.0.0"; sha256="1563d9r7f25vw5vsph21z3dwz9n40dpaiyx28ay1bbp5i1x2l3rb"; depends=[nnet qusage]; }; mFLICA = derive2 { name="mFLICA"; version="0.1.1"; sha256="0r7jpbshmb2p090f2bd7f458rlp2gck1wv7yspf1v55xxjwb6r5x"; depends=[dtw ggplot2]; }; @@ -10795,14 +11209,16 @@ in with self; { mSimCC = derive2 { name="mSimCC"; version="0.0.1"; sha256="1f15r214srcdb4yacmy4hq890a674iqd2s7bry5dk20k46qdl026"; depends=[doParallel foreach]; }; mStats = derive2 { name="mStats"; version="3.4.0"; sha256="196fjnld26dmirga4mghlvsrj4fgnw08wdg77masxm15kpvm1x1d"; depends=[]; }; maGUI = derive2 { name="maGUI"; version="3.0"; sha256="1ak2sa6y766v5zh54bf7j9hklmkia40nsdchyw834ybb9ijjyjsm"; depends=[Biobase gWidgets2 gWidgets2RGtk2 impute limma Rgraphviz RGtk2 ssize]; }; - maSAE = derive2 { name="maSAE"; version="2.0.2"; sha256="0vdbcifg0ilhrayamf7khdfmxzpns8rx5a3i8dsa2iwhsn7kwg5m"; depends=[]; }; - mable = derive2 { name="mable"; version="2.1.1"; sha256="14bjyij9m86bha1g79aay6x127aq6pqw3hgdklf943inggqb3ava"; depends=[aftgee icenReg survival]; }; + maSAE = derive2 { name="maSAE"; version="2.0.3"; sha256="0453rvfhi4zvjhbkjammy81gxi6ax75gs8iqpnphbrv60agz0bjc"; depends=[]; }; + mable = derive2 { name="mable"; version="3.0.1"; sha256="14vv0dhfrsbxqs8nmisx1ka9r4h9nhgj4mjqnakwchgr58jhpwxb"; depends=[doParallel foreach icenReg iterators survival]; }; maboost = derive2 { name="maboost"; version="1.0-0"; sha256="18d36cgvn8p75nidfr6al458jbzwc1i7x77y1ks50y9phrz3wf65"; depends=[C50 rpart]; }; macc = derive2 { name="macc"; version="1.0.1"; sha256="1qj4mlikbqrxa6m46527xmxdbk7b3l95z6jdgpmi0ifywjiv52a4"; depends=[car lme4 MASS nlme optimx]; }; machQA = derive2 { name="machQA"; version="0.1.4"; sha256="1rdrjy9sxql2c9y691a1jrmgsv7m1ihsschixxb6wc7aahf7mav6"; depends=[machina plyr]; }; machina = derive2 { name="machina"; version="0.1.6"; sha256="009mzqb5jgnilj9b5ldmm5600008bljlqacm8jjxvqsfnfdfg8zv"; depends=[DT httr jsonlite lubridate rhandsontable xts]; }; macleish = derive2 { name="macleish"; version="0.3.6"; sha256="0n33di2f42b2gn8qhs49j8f99l8qgxzb9lqnv50hc9zxgli5ds1v"; depends=[dplyr etl lubridate readr sf]; }; - maczic = derive2 { name="maczic"; version="0.1.0"; sha256="1wa63j718jd4k11x5fhgbnn9f2wayvpvg5670r8911qmciy5n5lw"; depends=[BB emplik MASS mathjaxr mediation pscl sandwich survival]; }; + maclogp = derive2 { name="maclogp"; version="0.1.1"; sha256="1fbwv4j4mb7zkyc5vspq7k17pwr49dbvqkssda54ggcf1nbqykmb"; depends=[BMA plot_matrix rlist]; }; + mactivate = derive2 { name="mactivate"; version="0.6.5"; sha256="0mnnnlq4x3dzl0b0frn2jmqjk2n4vw6cq0hh1kmf5ndh8rc298c9"; depends=[]; }; + maczic = derive2 { name="maczic"; version="0.2.0"; sha256="0r60q34ff38cdxf20b1f07wc4rbac1ch0chri36x221k2cnpxnhh"; depends=[BB emplik MASS mathjaxr mediation pscl sandwich survival]; }; mada = derive2 { name="mada"; version="0.5.10"; sha256="1hllv371dm307nkpld0aszjyxfgnajr7gb9zwh40pyzw4q4a2rqb"; depends=[ellipse mvmeta mvtnorm]; }; maddison = derive2 { name="maddison"; version="0.1"; sha256="1ji51wnj0ybjd30b4bwn5npyswrmcfrbxcmdlngwzvca1knh8g1c"; depends=[]; }; maditr = derive2 { name="maditr"; version="0.7.4"; sha256="1b7vvg03xfcmizahlnjbxk67xmmgqi96bvp16d135jqgfijmg35f"; depends=[data_table magrittr]; }; @@ -10811,18 +11227,20 @@ in with self; { madrat = derive2 { name="madrat"; version="1.64.5"; sha256="1gccfpzbm5cq9q288k86mq0madh8x9nhw06hrrcfjj5waqhi30lj"; depends=[assertthat digest magclass rlang spam stringr]; }; mads = derive2 { name="mads"; version="0.1.6"; sha256="0nz1fg3gyj72k6dpkjnwqjvps0inv1qgk5vlc8ycj3k720qcsd81"; depends=[mrds]; }; madsim = derive2 { name="madsim"; version="1.2.1"; sha256="11gfyimbz363p5xy1x6rsz5fcgzcr55myc5aaz5lazjkcnfn17aq"; depends=[]; }; - magclass = derive2 { name="magclass"; version="5.15.6"; sha256="020m4782f0an10d16qqzv1wmh4gz6cnfhcs7k0qlvflhbij25jw5"; depends=[abind data_table forcats maptools sp]; }; + magclass = derive2 { name="magclass"; version="5.24.7"; sha256="1xy3kr8xf4ydjrm2k6v7ca1wzrzvwd57sqxpl6z32y881azn2659"; depends=[abind data_table forcats maptools sp]; }; magic = derive2 { name="magic"; version="1.5-9"; sha256="0snmdh6vk0p6ar1swsihisinxrx7l8371dri5lk0z24ysgr5w7gs"; depends=[abind]; }; magicLamp = derive2 { name="magicLamp"; version="0.1.0"; sha256="1nfcnbqd6vawz8l3vgkbhmm462xdvaa4pn6axzmz8hl05xv2k3cv"; depends=[httr tibble]; }; magicaxis = derive2 { name="magicaxis"; version="2.2.1"; sha256="1ba8psg3ja8b69s1afywsjz5sfljryhk5vvq1n4dzm1gsz6c772l"; depends=[celestial mapproj MASS plotrix RANN RColorBrewer sm]; }; magicfor = derive2 { name="magicfor"; version="0.1.0"; sha256="07l33fczr1x42sfxrsqq4q6r65sdflin6l8f5cgclnvx1858jdip"; depends=[]; }; - magick = derive2 { name="magick"; version="2.5.2"; sha256="0myvryya7b4bbw0hs4jqflrbdffmg78kz28gbybw3yc7zwc7sqxx"; depends=[curl magrittr Rcpp]; }; - magickGUI = derive2 { name="magickGUI"; version="1.2.0"; sha256="0mwfdh7jgi2apcdvrp7mmfr85i8qrx7n9dqymz09x0pl120kfy11"; depends=[magick]; }; + magick = derive2 { name="magick"; version="2.7.2"; sha256="1ckp85wk9lj6jjm92ww4mg1r4h4zm2cm68y6fyb1hz4mr3nihmji"; depends=[curl magrittr Rcpp]; }; + magickGUI = derive2 { name="magickGUI"; version="1.2.2"; sha256="1acb0fcsp07jf7g0jak66bflq37wv588dgya29pw6gy01g0ch084"; depends=[magick]; }; + magmaR = derive2 { name="magmaR"; version="1.0.0"; sha256="1xz79352azganmqncpy79pddina7908jdglswvcn7nxqxk4nvs9i"; depends=[crul jsonlite]; }; magree = derive2 { name="magree"; version="1.1"; sha256="0q0v1mx4k1hry0l21611z9jx967l89xpjddvw2v1v9c3kl11kfi6"; depends=[]; }; magrittr = derive2 { name="magrittr"; version="2.0.1"; sha256="0pxd99fvg406whqsk9wh756rayrwh84xn3h44zmlpcy23kanbhkm"; depends=[]; }; maic = derive2 { name="maic"; version="0.1.2"; sha256="0cvb3s67skzkqkh1hm007wvzgx9zg27bwwzw39sq4z0kyafjvg28"; depends=[Hmisc matrixStats weights]; }; mail = derive2 { name="mail"; version="1.0"; sha256="1m89cvw5ba4d87kp2dj3f8bvd6sgj9k56prqmw761q919xwprgw6"; depends=[]; }; mailR = derive2 { name="mailR"; version="0.4.1"; sha256="1bfh3fxdqx9f9y3fgklxyslpcvhr9gcj7wsamaxzgrcsaxm8fdlw"; depends=[R_utils rJava stringr]; }; + mailmerge = derive2 { name="mailmerge"; version="0.2.0"; sha256="0lqixyl5faypp1vhcfsy3fxr58dg7zphwck2w6cbbazi102xqyh5"; depends=[commonmark dplyr fs glue gmailr googledrive googlesheets4 lifecycle magrittr miniUI purrr rmarkdown rstudioapi shiny withr]; }; mailtoR = derive2 { name="mailtoR"; version="0.1.0"; sha256="0mnzblhy2vbxkf0k49bw1g08jw84s59zxbjrva2j2q347wzf4rgk"; depends=[glue htmltools]; }; majesticR = derive2 { name="majesticR"; version="0.1.1"; sha256="0x23p4js9cfnj8c33cp0fql5pvs4fn4frbbzpq85mxjhiifkxxpf"; depends=[jsonlite urltools]; }; makeFlow = derive2 { name="makeFlow"; version="1.0.2"; sha256="0r7a0klgx144rnks0fhjflnf8vfyyx2544n86nnxkp6cdvw0b4pw"; depends=[dplyr RColorBrewer]; }; @@ -10837,17 +11255,19 @@ in with self; { mand = derive2 { name="mand"; version="0.1"; sha256="0hrm7icc3akr98s4icn4yk4a05l547x2y7dyihzj4svwcqxgfh0r"; depends=[caret imager msma oro_dicom oro_nifti]; }; mandelbrot = derive2 { name="mandelbrot"; version="0.2.0"; sha256="04a288jj8h1a04r584a02wg9dm3c6zifhqwj964ybsvgb4m6g99s"; depends=[reshape2]; }; manet = derive2 { name="manet"; version="2.0"; sha256="1dnacgkdjmn7yiqk71qx5jgfipbpvqfdnrdd8wm0b9p8kgw4x7n4"; depends=[combinat igraph mclust MCMCpack]; }; - mangoTraining = derive2 { name="mangoTraining"; version="1.1"; sha256="128ysvyqkddl035v3w2zm98y1ykly3pwjpyas7vhqi953by98hyk"; depends=[tibble]; }; - manhattanly = derive2 { name="manhattanly"; version="0.2.0"; sha256="185fkakx4v35n4gmlpk2kfm2bm8p320q4khkw936m09zx3aqz398"; depends=[ggplot2 magrittr plotly]; }; + mangoTraining = derive2 { name="mangoTraining"; version="1.1.1"; sha256="15m9n5258yjffzhnrgp395g3iiv1f0qlv0cdsdgspmb83m5p3lbb"; depends=[tibble]; }; + manhattanly = derive2 { name="manhattanly"; version="0.3.0"; sha256="007qvfzq8fyvnirywfpl6n1gqxxizz32z4xbgnnx7riyb7nxl1qh"; depends=[ggplot2 magrittr plotly]; }; manhplot = derive2 { name="manhplot"; version="1.1"; sha256="17yw10gpfp6bqmilb09v61jd2amz6cv1z38si4nqnhbvmac065qd"; depends=[ggplot2 ggrepel gridExtra reshape2]; }; manifestoR = derive2 { name="manifestoR"; version="1.5.0"; sha256="0b4x4ampzmxcmlcyvl683rwynzwjg1cyx5zpamgy8027fh376zcp"; depends=[base64enc dplyr DT functional htmltools htmlwidgets httr jsonlite magrittr NLP psych purrr readr tibble tidyselect tm zoo]; }; manipulate = derive2 { name="manipulate"; version="1.0.1"; sha256="1klknqdfppi5lf6zbda3r2aqzsghabcsaxmvd3vw3cy3aa984zky"; depends=[]; }; manipulateWidget = derive2 { name="manipulateWidget"; version="0.10.1"; sha256="1vi71sjh7z1a880wffk8qqw7iysvk42q78giqxmm2sqz2a912qlx"; depends=[base64enc codetools htmltools htmlwidgets knitr miniUI shiny webshot]; }; - manymodelr = derive2 { name="manymodelr"; version="0.3.2"; sha256="1z1ds6h7g3vq8jg1vlv4n7gkpy7bka0b2mzmr46nzjr71cffr8dv"; depends=[caret dplyr e1071 ggplot2 lme4 Metrics]; }; - maotai = derive2 { name="maotai"; version="0.1.8"; sha256="03p5y6k4dgbb7kqhrrdi0k1pgxrk27jinrdbchszb7zd8z9v4qkl"; depends=[cluster dbscan fastcluster labdsv Matrix nabor Rcpp RcppArmadillo RcppDist Rdpack reticulate RSpectra Rtsne shapes]; }; + manymodelr = derive2 { name="manymodelr"; version="0.3.5"; sha256="0i8wakdqfi3fi2k4fl3cxmsifis5b914wl2rdavwhx4pw99ck9y3"; depends=[caret dplyr e1071 ggplot2 lme4 Metrics]; }; + maotai = derive2 { name="maotai"; version="0.1.9"; sha256="0cidcvcnsnzzj02s5iv4y3d4j3nxvkbh9wrrih2xmadhfbjbvm6y"; depends=[cluster dbscan fastcluster labdsv Matrix RANN Rcpp RcppArmadillo RcppDist Rdpack RSpectra Rtsne shapes]; }; mapReasy = derive2 { name="mapReasy"; version="1.0"; sha256="13va0z967ckwxnnianki5aj66km0x6r37nj4mz9qd3b0bps4g2kj"; depends=[Hmisc rgdal sp]; }; - mapSpain = derive2 { name="mapSpain"; version="0.1.1"; sha256="1dcf3nvxc0msczcgv8kvxnvzzifb0xh5a6057qmwq7q5zwx6gmad"; depends=[countrycode giscoR leaflet png raster sf slippymath]; }; + mapSpain = derive2 { name="mapSpain"; version="0.2.3"; sha256="1lcis5mxi46qgqk751f95a1hh00ydcxi7rhwpmrrq75cfapzd69r"; depends=[countrycode giscoR leaflet png raster sf slippymath]; }; mapStats = derive2 { name="mapStats"; version="2.4"; sha256="18pp1sb9p4p300ffvmzjrg5bv1i7f78mhpggq83myc26c3a593na"; depends=[classInt colorspace Hmisc lattice maptools RColorBrewer reshape2 sp survey]; }; + mapaccuracy = derive2 { name="mapaccuracy"; version="0.1.0"; sha256="1rrnbmar8s48kww2x9qjlm68xs55mbc8cnms2crdsaah7787s6aa"; depends=[assertthat gtools reshape]; }; + mapbayr = derive2 { name="mapbayr"; version="0.4.1"; sha256="1zblfi4k07559cacd1bxi1h0mpk4phqljcaxc4bg5pjnb0b6l1wz"; depends=[dplyr ggplot2 magrittr mrgsolve optimx purrr rlang stringr tibble tidyr]; }; mapboxapi = derive2 { name="mapboxapi"; version="0.2"; sha256="0rqpynin27vvwyjjv0c22mhrpsq4cgkkvhfhf24aqbkzfay92905"; depends=[aws_s3 curl dplyr geojsonsf httr jsonlite leaflet magick protolite purrr rlang sf slippymath stringi tidyr]; }; mapboxer = derive2 { name="mapboxer"; version="0.4.0"; sha256="0f873js87dgk8nqnhpxh88svvsbnk81vkm7gycb62mkr4xqsgqs7"; depends=[geojsonsf htmltools htmlwidgets magrittr purrr yaml]; }; mapcan = derive2 { name="mapcan"; version="0.0.1"; sha256="1a4135wc1h4nzcv6xq0bg75i744wyq8p7q0ix7y2x2gb6s35w46k"; depends=[dplyr ggplot2 magrittr]; }; @@ -10857,17 +11277,19 @@ in with self; { mapedit = derive2 { name="mapedit"; version="0.6.0"; sha256="1ix0sjsqb6646xyi73am9ic97plw9y9p4pl8mrkpzvqzm0pxdhxx"; depends=[dplyr htmltools htmlwidgets jsonlite leafem leaflet leaflet_extras leafpm mapview miniUI raster scales sf shiny sp]; }; mapfit = derive2 { name="mapfit"; version="0.9.7"; sha256="16a318bz3my27qj0xzf40g0q4bh9alg2bm6c8jbwgswf1paq1xmx"; depends=[Matrix]; }; mapi = derive2 { name="mapi"; version="1.0.1"; sha256="0qfwxrd0ya5amw7f96pfxf3f8m97s7vhaz62clqn083mw8ddaz2l"; depends=[data_table pbapply Rcpp sf]; }; - mapmisc = derive2 { name="mapmisc"; version="1.7.9"; sha256="0dq360jdhbaq3i0vylvxcgrvw9pmp2k5as72lahyvl7v7bv4079d"; depends=[raster sp]; }; + mapmisc = derive2 { name="mapmisc"; version="1.8.0"; sha256="0xp2ns6j8craz74jw4gjjhzkfbbihcy8d9dg1i08hiws743kzd8s"; depends=[raster sp]; }; + mapping = derive2 { name="mapping"; version="1.2"; sha256="0y33rh5pjqblydvcr67q9sb3vpqksv26im9cvayhsz5j7q6q98ax"; depends=[cartography curl dplyr geojsonio ggplot2 htmltools httr jsonlite leaflet leafpop leafsync mapview rgdal sf stringr tmap tmaptools viridisLite]; }; mapplots = derive2 { name="mapplots"; version="1.5.1"; sha256="18s2y66f8vi8g2r8a25zbgp2xm079r8v8qxv0w71h8krycs6vs9p"; depends=[]; }; - mappoly = derive2 { name="mappoly"; version="0.2.1"; sha256="168g79qb1f26yvnnfb931pvk1m919rq371aksdby9nrai6fbi91d"; depends=[cli crayon dendextend dplyr fields ggplot2 ggpubr ggsci magrittr plotly princurve Rcpp RCurl reshape2 rstudioapi scatterplot3d smacof vcfR zoo]; }; + mappoly = derive2 { name="mappoly"; version="0.2.3"; sha256="1swnll428dxd8v1sa42m6x9azr5g7jxvk4q37nzsinwd7b4cw8pa"; depends=[cli crayon dendextend dplyr fields ggplot2 ggpubr ggsci magrittr plotly princurve Rcpp RCurl reshape2 rstudioapi scatterplot3d smacof vcfR zoo]; }; mapproj = derive2 { name="mapproj"; version="1.2.7"; sha256="0nscsfq8md6ri9258xz57c3dj81wdl6kdwf4a9qcrwwbn20i427h"; depends=[maps]; }; mapr = derive2 { name="mapr"; version="0.5.2"; sha256="0qc1zqa2yqgy777wbm6lj37vzaaxaz0gdimr62wv9fyddkbkshk4"; depends=[data_table ggplot2 gistr jsonlite leaflet maps RColorBrewer sp spocc]; }; maps = derive2 { name="maps"; version="3.3.0"; sha256="05i2ppl5z4p8rawgqmy3z4ia05fcblpq1vvrmrkgkkpdlhczx6hr"; depends=[]; }; mapsFinland = derive2 { name="mapsFinland"; version="0.1.1"; sha256="0kx9r28lvc6bbl478i9gyy58kbp5hi7akysyld87fxk5x0601j19"; depends=[]; }; mapsRinteractive = derive2 { name="mapsRinteractive"; version="1.0.1"; sha256="03x5mza9y5kdqshma0k7bynmd3fffayy1j243m5bhw7ln85ws73x"; depends=[gstat raster rgdal rgeos sp]; }; mapsapi = derive2 { name="mapsapi"; version="0.4.8"; sha256="13v2hgngbxs6v7cxb8nnsa3i96a0rldvcx9xrx5l6l584vvs8j9f"; depends=[bitops magrittr RgoogleMaps sf stars xml2]; }; - maptiles = derive2 { name="maptiles"; version="0.1.1"; sha256="0ppg74r0ccl97aqh2w9mzvpqqg3v873k0k0pig3fac02vgdsfsgh"; depends=[curl png sf slippymath terra]; }; - maptools = derive2 { name="maptools"; version="1.0-2"; sha256="0jgf3wg47jdnznxb3ncv4is9ackwviy4lzcyggqwzw3wh6jnvb6s"; depends=[foreign lattice sp]; }; + mapsf = derive2 { name="mapsf"; version="0.2.0"; sha256="0g1agahjdplqa0ii0c7949b7a2dbc30xw4mr4lsp41ngcwjl8yc6"; depends=[classInt Rcpp sf]; }; + maptiles = derive2 { name="maptiles"; version="0.1.3"; sha256="1krdq9ycaknkcjk7zhms34c51dfkfmfq23ivb499sq6mzh0x5s4l"; depends=[curl png sf slippymath terra]; }; + maptools = derive2 { name="maptools"; version="1.1-1"; sha256="0pn4gwh2rl6pfh2vbc7ln86kzlg22cfpd02z95j7zpjidz2mva8l"; depends=[foreign lattice sp]; }; maptpx = derive2 { name="maptpx"; version="1.9-7"; sha256="0f85i3vwr5rvz261z6j7x15gsahxrq4qqddfb0qyhypgihvwh857"; depends=[slam]; }; maptree = derive2 { name="maptree"; version="1.4-7"; sha256="1k7v84wvy6wz6g0dyiwvd3lvf78rlfidk60ll4fz7chvr2nrqdp4"; depends=[cluster rpart]; }; mapview = derive2 { name="mapview"; version="2.9.0"; sha256="145n1shc8bjvm2awvnxd8884mi5bxjqymlkvz1vv3gkwwssv430p"; depends=[base64enc htmltools htmlwidgets lattice leafem leaflet leafpop png raster satellite scales sf sp webshot]; }; @@ -10876,33 +11298,35 @@ in with self; { marcher = derive2 { name="marcher"; version="0.0-2"; sha256="0hcxbfrwniih4kvx5sxhlffz1pc87kf52v8hvaf193rhhdykis5q"; depends=[magrittr Matrix minpack_lm mvtnorm numDeriv plyr RColorBrewer scales zoo]; }; marelac = derive2 { name="marelac"; version="2.1.10"; sha256="08phsghzvi0z78pkb5lkamni83fsw0bqfri99j6bjf6y14aygif9"; depends=[seacarb shape]; }; marg = derive2 { name="marg"; version="1.2-2.1"; sha256="1r6rl7dhvm8dghm7pm4hfw3924qja65hczl6d47v9ixnv4rxyzr9"; depends=[statmod survival]; }; - margins = derive2 { name="margins"; version="0.3.23"; sha256="1gn18bmz7zwdv5fm62g4kj1x0y4lzhwvwgk4xc9hfi2mh5w08j4f"; depends=[data_table MASS prediction]; }; + marginalizedRisk = derive2 { name="marginalizedRisk"; version="2021.2-4"; sha256="0kagl9xghq9nsh9qvx165j1a5plh08zxhb6nm8j402mnl8pq7a4z"; depends=[]; }; + margins = derive2 { name="margins"; version="0.3.26"; sha256="0sx5xjbzz1rjz8bklfna3171s53xsh123x4bh0kmwp006v8rv309"; depends=[data_table MASS prediction]; }; marima = derive2 { name="marima"; version="2.2"; sha256="03nvh93r4052li84yjqzc106gwh1542q9s192s980gs6sgy8scm6"; depends=[]; }; - marindicators = derive2 { name="marindicators"; version="1.0.0"; sha256="1id055jc624n34vxb68gdy2kgfsm5y61dkfskzhlrwq9d5npxv6m"; depends=[]; }; markdown = derive2 { name="markdown"; version="1.1"; sha256="06zwbrp14bri3470anadd7dvgmw06xf8df6v2pk64wx3f9sd934d"; depends=[mime xfun]; }; markdownInput = derive2 { name="markdownInput"; version="0.1.2"; sha256="1qxil2liikbbn6w8niyc03fwqvwvdv6wiy98ip8j77729i7g2hln"; depends=[markdown shiny shinyAce]; }; marked = derive2 { name="marked"; version="1.2.6"; sha256="0k367sjyac1w894rndz5m0drmbd56nzyx5mr7mvhsqzq3gnv4dw5"; depends=[bookdown coda data_table expm kableExtra knitr lme4 Matrix numDeriv optimx R2admb Rcpp TMB truncnorm]; }; + markerpen = derive2 { name="markerpen"; version="0.1.1"; sha256="0i9md9vbqkxibjkn37givxzq8mq0232cvv2fyz6g8cj6flxm6vzr"; depends=[Rcpp RcppEigen RSpectra]; }; marketr = derive2 { name="marketr"; version="0.0.2"; sha256="12nhlz40n80i6zg7y5w9zknq9qpk9qwd3wbvvya1ff8gq195147w"; depends=[dplyr magrittr tibble tidyr]; }; markmyassignment = derive2 { name="markmyassignment"; version="0.8.3"; sha256="1fslp5fzs79gbw9ydbzxldpclrbdj3qrzmm1b61xji3qzif6r4la"; depends=[checkmate codetools httr lazyeval rlang testthat yaml]; }; markophylo = derive2 { name="markophylo"; version="1.0.8"; sha256="05hfykjzx4wf2p1d6dvyx5lizfxmq3zprvnfg74r7l1izp7wpl38"; depends=[ape numDeriv phangorn Rcpp RcppArmadillo]; }; - markovchain = derive2 { name="markovchain"; version="0.8.5-3"; sha256="14yrhxnfrq9rhsy6vhiq933g7a39vfmfzsai9jdy6pzykjxmrmf5"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; + markovchain = derive2 { name="markovchain"; version="0.8.5-4"; sha256="1i5k2npvk5z5a7jk7mpvs4p8hbwsj4zyxp8rbpvsf94sgqji7cpy"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; marl = derive2 { name="marl"; version="1.0"; sha256="0rndnf3rbcibv3gsrw1kfp5zhg37cw9wwlz0b7dbwprd0m71l3pm"; depends=[]; }; marmap = derive2 { name="marmap"; version="1.0.5"; sha256="0aqir3daf154n6qqmy48snsgiz9ixdkrfck67x4pmasxj9w5wgl9"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; }; - marqLevAlg = derive2 { name="marqLevAlg"; version="2.0.4"; sha256="0jizmnd2g1vgy48wbqn112ip8vygnx17fmidynrgi8q99ia21mbp"; depends=[doParallel foreach]; }; + marqLevAlg = derive2 { name="marqLevAlg"; version="2.0.5"; sha256="0cp3p9cgnb9hw08s8gjs7yj51d4fsa5zkkrikbgzkw0skj1gaa51"; depends=[doParallel foreach]; }; mase = derive2 { name="mase"; version="0.1.2"; sha256="1023xvv6yngbc183hb13057spjildywqd0jw2w9jway3zv4dbw9v"; depends=[boot dplyr foreach glmnet magrittr Matrix Rdpack rpms survey]; }; mashr = derive2 { name="mashr"; version="0.2.38"; sha256="1w1ipkwixq8mr25v7w8vdyi6rwbkgsd0a69w05l0r6bms7dviki8"; depends=[abind ashr assertthat mvtnorm plyr Rcpp RcppArmadillo RcppGSL rmeta]; }; mason = derive2 { name="mason"; version="0.3.0"; sha256="1x5wiagb1sy5gkp0xkbr1jzhrjg1c2bqdh4hy6igwcnws2cbhxyr"; depends=[broom dplyr magrittr purrr rlang tibble tidyr tidyselect]; }; mastif = derive2 { name="mastif"; version="1.0.1"; sha256="1jw7dz4qxyj848qm7lwg0klcw028260nizdi5gdwf7wd5a2nis9c"; depends=[corrplot RANN Rcpp RcppArmadillo repmis xtable]; }; matR = derive2 { name="matR"; version="0.9.1"; sha256="1qw2vqmpq7gc3dmr9r000ccjj7xa0h82waxnvryz3l17ggryyjjm"; depends=[BIOM_utils MGRASTer]; }; matahari = derive2 { name="matahari"; version="0.1.3"; sha256="03mhn4qh1vcz2hr0mxp6gijwgrzvbpfb8dq7lqhchbk5gq5g3fnh"; depends=[clipr jsonlite purrr readr rlang rstudioapi tibble]; }; - match2C = derive2 { name="match2C"; version="0.1.0"; sha256="04sbsnbp2qmklfify7a2bdrx7y8r836qhwvklxi4nns5ivj51hqv"; depends=[mvnfast rcbalance Rcpp]; }; + match2C = derive2 { name="match2C"; version="1.1.0"; sha256="1i5g035lk4yb6dnf0d3zm85ld2cq3wsjjp893lzc0qs1yn36dw1q"; depends=[ggplot2 mvnfast rcbalance Rcpp]; }; matchMulti = derive2 { name="matchMulti"; version="1.1.7"; sha256="0k5psmjzcyr7pm603vni7w2hvslck05r81cngm26pql2prdrv5yk"; depends=[coin Hmisc MASS mvtnorm plyr rcbsubset weights]; }; matchbook = derive2 { name="matchbook"; version="1.0.7"; sha256="0xfqg8z2zkn215kqmjjkqdwrgsk7cn4jdpxfgd6razhcbvflg48j"; depends=[]; }; matchingMarkets = derive2 { name="matchingMarkets"; version="1.0-2"; sha256="1jj5hzxiivqinkpddmkqdxgi83jm6blann9wgv4g8prn3lvp0i85"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; }; matchingR = derive2 { name="matchingR"; version="1.3.2"; sha256="03imvgasiahcnzmc8kr2ywwv93fhg50qrqmvm6ifiz0g9d3xh8rr"; depends=[Rcpp RcppArmadillo]; }; matchmaker = derive2 { name="matchmaker"; version="0.1.1"; sha256="1sa2cah8gjvg0159rv1sfw9p0aljg66xmij31mz2vfk5683r4b00"; depends=[cli forcats rlang]; }; matconv = derive2 { name="matconv"; version="0.4.0"; sha256="0kl0647m45mrk13fyr0mkx1x9v3im66ciky8k8nmy4ahkffyasi4"; depends=[]; }; - mathjaxr = derive2 { name="mathjaxr"; version="1.0-1"; sha256="0j1124f7sb6r7fjfhrlara2402qpa2pf1m21amnpqz0c9l63fg8d"; depends=[]; }; + materialmodifier = derive2 { name="materialmodifier"; version="1.0.0"; sha256="0n736dmnpz0s14c90wm8f1ddf20zkf9nn13d34b6y9vrs8pm6c4z"; depends=[downloader imager jpeg magrittr moments png readbitmap stringr]; }; + mathjaxr = derive2 { name="mathjaxr"; version="1.4-0"; sha256="0rywdm4ki569hzmpwnzhr3h6slkkakf4l19rb2fa74ym6s13fmxs"; depends=[]; }; mathpix = derive2 { name="mathpix"; version="0.4.0"; sha256="0wwagf8v7awgiyi8vrfay5m2pbl1czn62g5bkg037wwy0c68n8va"; depends=[base64enc httr magick purrr rstudioapi texPreview]; }; matie = derive2 { name="matie"; version="1.2"; sha256="1ymx49cyvz63imqw5n48grilphiqvvdirwsrv82p7jgxdyav2xv0"; depends=[cba dfoptim gplots igraph mvtnorm seriation]; }; matlab = derive2 { name="matlab"; version="1.0.2"; sha256="0m21k2vzbc5d3c93p2hk4208xyd2av2slg55q5j1ibjidiryqgd2"; depends=[]; }; @@ -10912,23 +11336,26 @@ in with self; { matpow = derive2 { name="matpow"; version="0.1.1"; sha256="1a6q21ba16qfdpykmjwgmrb1kkvvyx48qg8cbgpdmch0vhibcgcp"; depends=[]; }; matricks = derive2 { name="matricks"; version="0.8.2"; sha256="0ik61jxd4hpw149dbbmis3wsfsim60mw9d0qjwh047qfg6sm1vsc"; depends=[ggplot2 Rcpp reshape2 rlang]; }; matrixLaplacian = derive2 { name="matrixLaplacian"; version="1.0"; sha256="1ixqdv3sz3sc79wn3vqhlq79j7x7cvl878m5hgvbcg6klfvlmmci"; depends=[scatterplot3d]; }; - matrixNormal = derive2 { name="matrixNormal"; version="0.0.4"; sha256="1x59n907d9846m5iwzdghs9s4nndrsf75spfs8b1zl21jpa7i2nv"; depends=[mvtnorm]; }; + matrixNormal = derive2 { name="matrixNormal"; version="0.0.5"; sha256="0yb2xnx72czfqzqpxnshlj8jjp6bi1l581wcw9mggisi3f79yp8h"; depends=[mvtnorm]; }; matrixProfile = derive2 { name="matrixProfile"; version="0.5.0"; sha256="0nd54k878xf7hzwxawh03c3na4jfvb68afarkwrmmffjlp3i8a9g"; depends=[fftw signal TTR zoo]; }; - matrixStats = derive2 { name="matrixStats"; version="0.57.0"; sha256="0hzkx7yi9ira476izsgw7r2bhv72ra4z2m9zr1i1f4ivrn3ihs7r"; depends=[]; }; + matrixStats = derive2 { name="matrixStats"; version="0.58.0"; sha256="0jab3xk56vqqzgz8jbsvxvsvr83sj0gb3cic0906wjyjijwv8rw3"; depends=[]; }; matrixStrucTest = derive2 { name="matrixStrucTest"; version="1.0.0"; sha256="06la9xmpi1viyjml4m1akbna3lwkz5lnq95v1nnf73i9zpfwz03k"; depends=[]; }; matrixTests = derive2 { name="matrixTests"; version="0.1.9"; sha256="128h8krc7n6lrh6njyj650ma5gr549p8cyps6dxij6bm0p3n7r62"; depends=[matrixStats]; }; matrixcalc = derive2 { name="matrixcalc"; version="1.0-3"; sha256="1c4w9dhi5w98qj1wwh9bbpnfk39rhiwjbanalr8bi5nmxkpcmrhp"; depends=[]; }; + matrixdist = derive2 { name="matrixdist"; version="1.0.2"; sha256="1dz7r34a7gj4pjykqzq9i3l1bxg2risdd30cjp1wp6zd3ail6nby"; depends=[Rcpp]; }; + matrixpls = derive2 { name="matrixpls"; version="1.0.13"; sha256="0m9gqq5waicj3znlsyz50cj6w1x6rkvfwknavhxid8r4p9h891ak"; depends=[assertive lavaan MASS matrixcalc psych]; }; + matrixprofiler = derive2 { name="matrixprofiler"; version="0.1.4"; sha256="0ak03x46f87llqg16k5jjpmk7wcil6cq96wiwc9fc37yrwnqlqml"; depends=[checkmate Rcpp RcppParallel RcppProgress RcppThread]; }; matrixsampling = derive2 { name="matrixsampling"; version="2.0.0"; sha256="05dbn7rj07jx1hj7i6k3akf11hysxg6v32kav9fvsqmiy2zkippa"; depends=[keep]; }; matsbyname = derive2 { name="matsbyname"; version="0.4.16"; sha256="13gl1jkpw3dpv93fvgg84sv4kbg4qv5hzz5z35fsxhqj5m5qrgl3"; depends=[assertthat dplyr Hmisc magrittr purrr rlang stringi tibble]; }; matsindf = derive2 { name="matsindf"; version="0.3.6"; sha256="1h0hlr2vvqj1jfkn6i7x137xlxsawnnhkg88kl7fga4wfznzyms3"; depends=[dplyr magrittr matsbyname purrr rlang tibble tidyr]; }; matuR = derive2 { name="matuR"; version="0.0.1.0"; sha256="01nxs4czzs1kcxk63nwr2gnvffmlnx3yfllrhi8khdkj498s6sx1"; depends=[dplyr ggplot2 ggrepel lubridate magrittr tidyr]; }; mau = derive2 { name="mau"; version="0.1.2"; sha256="1wgiai8f1kbjh9hfwv4m0kavd44ib5xb33p8m16zpawnw14m7sj5"; depends=[data_table ggplot2 gtools igraph RColorBrewer Rdpack stringr]; }; mauricer = derive2 { name="mauricer"; version="2.3"; sha256="0cbrxvlpw89rrdnnsxbl1jmmkn4gccp2xaipnarhk5qd9wp6zm6c"; depends=[beastier curl stringr]; }; - maxLik = derive2 { name="maxLik"; version="1.4-6"; sha256="1syskb0zfqqnhb2g1dcf28lnfccgnjqbm93x5zxxf9x4wwh3liq6"; depends=[miscTools sandwich]; }; + maxLik = derive2 { name="maxLik"; version="1.4-8"; sha256="0dkxkj2mfmqwbwnjsw9j7s8nzhazwrlfzzfz5zyfypanahasdvpy"; depends=[miscTools sandwich]; }; maxTPR = derive2 { name="maxTPR"; version="0.1.0"; sha256="13x5rz0mfha5pzahkk4x67ncz9v77sa690cyl6wigwsldsrvzr3h"; depends=[aucm Rsolnp]; }; maxadjAUC = derive2 { name="maxadjAUC"; version="0.1.0"; sha256="04zdaqmavhhrj63s2k5pqncvlzbfnxan7r0fagfka9dypwwcl5qm"; depends=[aucm Hmisc Rsolnp survival]; }; maxcombo = derive2 { name="maxcombo"; version="1.0"; sha256="1hwv38a07ry5fv53r2vizifj83xf98znix8nx4zshqyk38vblgp5"; depends=[dplyr magrittr MCMCpack mstate mvtnorm purrr rlang survival]; }; - maximin = derive2 { name="maximin"; version="1.0-3"; sha256="1wfhpgk149aw6gkdlr8g29icj0l0xa8fczxkz4hbdr91dqmnxvp3"; depends=[plgp]; }; + maximin = derive2 { name="maximin"; version="1.0-4"; sha256="0pkf84313x5r7qmhfbd70rjmxffrfk6kzirw1wzrqqygbmcw8k4s"; depends=[plgp]; }; maxlike = derive2 { name="maxlike"; version="0.1-8"; sha256="0lbj212dbx8lbkw808xlhniw5864bh86xs8zwvxcnngj0abapalh"; depends=[raster]; }; maxmatching = derive2 { name="maxmatching"; version="0.1.0"; sha256="1xbwrhmr8gzvlcprib7nzvqrcd355bhx7wkqxrvfk4g7dvskf9ka"; depends=[igraph]; }; maxnet = derive2 { name="maxnet"; version="0.1.2"; sha256="1rfcylbv068pz4jgry5ijszwf5fibz566s5iv0ar8dhv0fhjr86z"; depends=[glmnet]; }; @@ -10944,12 +11371,13 @@ in with self; { mbir = derive2 { name="mbir"; version="1.3.5"; sha256="10sd5gk2k94cmi49nbpywqvh9bxj9q3psa3d00zmw1a7d6c0jjpd"; depends=[effsize psych]; }; mblm = derive2 { name="mblm"; version="0.12.1"; sha256="1fipb3bryaimr30lcxsxrn0ymv24z39swca7s4z7p9xcfg3ban1b"; depends=[]; }; mbmixture = derive2 { name="mbmixture"; version="0.2-5"; sha256="0w6a77lavdsrg9sf6jmi3xyxgx4d0v2nf85fh9bnrjdp51g6d0zi"; depends=[numDeriv]; }; - mboost = derive2 { name="mboost"; version="2.9-4"; sha256="1dgyc38axfk2a430wsdnnk76xikizkyxf5r0l1kbp6cacrx6idz0"; depends=[lattice Matrix nnls partykit quadprog stabs survival]; }; + mboost = derive2 { name="mboost"; version="2.9-5"; sha256="0yg07fdd1sbjfhhxn1dqgph2vzqyq7l52cdk5iq2a2zy1vh176yg"; depends=[lattice Matrix nnls partykit quadprog stabs survival]; }; mboxr = derive2 { name="mboxr"; version="0.2.0"; sha256="1d11fpz17k65dzw9sjc7zfs1jpajzrh2pvr2s435p83g3mpf40vz"; depends=[dplyr lubridate magrittr purrr reticulate stringr tibble tidyr]; }; + mbr = derive2 { name="mbr"; version="0.0.1"; sha256="08534d0ssj5zli7880a2wzl46ydf87gn5xlv6xp0iph71wlpc52y"; depends=[data_table dplR MASS Matrix Rfast]; }; mbrglm = derive2 { name="mbrglm"; version="0.0.1"; sha256="0yxq1xk8qy5hpiqqldyrs78lp4ggdp5lj2lmh8rqq1xvsfr6nrh4"; depends=[enrichwith nleqslv]; }; mbsts = derive2 { name="mbsts"; version="1.0"; sha256="0wkglh1g0kdlgw4afqxvwb26difnqhf6g5jsbf8y39mpipxla365"; depends=[KFAS MASS Matrix MCMCpack pscl]; }; mc_heterogeneity = derive2 { name="mc.heterogeneity"; version="0.1.2"; sha256="1nsqbc4cqyg6g3s6ish3fbhqygy1kay68smbv0rhivp0x0dv7can"; depends=[boot_heterogeneity metafor]; }; - mc2d = derive2 { name="mc2d"; version="0.1-18"; sha256="1ljw8ms661bsdqbfpjvvrif9n0c2i6lzxyqj4rxhxsp3dj18w3g3"; depends=[mvtnorm]; }; + mc2d = derive2 { name="mc2d"; version="0.1-19"; sha256="0h4hl4gcig1yaviwxy3rx0x7a1ys98vcdgi153rx01pwp8f6jlfi"; depends=[mvtnorm]; }; mcBFtest = derive2 { name="mcBFtest"; version="0.1.0"; sha256="1fmn9pzbvk508ljspksppqxdvggx5bvipgs54nz9605y6p8zzmi5"; depends=[MASS]; }; mcGlobaloptim = derive2 { name="mcGlobaloptim"; version="0.1"; sha256="1p8841y9a4yq51prv6iirgw9ln8jznx8nk547sc5xlznksjy1g9n"; depends=[randtoolbox snow]; }; mcMST = derive2 { name="mcMST"; version="1.0.1"; sha256="18ka76g9pgpycaw0hl8vxpabd8584q1l5d3xmrzy1zwincsg7vgs"; depends=[BBmisc checkmate ecr ggplot2 gtools lhs parallelMap reshape2 vegan]; }; @@ -10967,50 +11395,52 @@ in with self; { mcen = derive2 { name="mcen"; version="1.2"; sha256="1j0fy0ccbx85znvsxpd72pcgk3qg6r1ngpjjgr04mg9bwlfzpxm2"; depends=[faraway flexclust glmnet Matrix]; }; mcga = derive2 { name="mcga"; version="3.0.3"; sha256="109m01mab5awjf8zjzwl9j7hzac15dyq3x6zba9hsy5i02k5d5w4"; depends=[GA Rcpp]; }; mcgibbsit = derive2 { name="mcgibbsit"; version="1.1.0"; sha256="09ydcbjz3abmh46966v01dh26fy79dfklk3zjf262zp3c62ld9yf"; depends=[coda]; }; - mcglm = derive2 { name="mcglm"; version="0.6.0"; sha256="0p06bibckkq7aynhp8livsyvvy3abwswwvwl5ps4fxqsgncfng5f"; depends=[assertthat Matrix Rcpp RcppArmadillo]; }; mcheatmaps = derive2 { name="mcheatmaps"; version="1.0.0"; sha256="1gglm32xpmim38m7fziczgqfbpcq2899lxardsrzg6j1vhmf765y"; depends=[gridBase]; }; mclcar = derive2 { name="mclcar"; version="0.1-9"; sha256="0bwnivmajsrvmwskhk44qhz4nnc0irxq83g0kzbj4wshhivnwryp"; depends=[fields maxLik nleqslv rsm spam spdep]; }; mcll = derive2 { name="mcll"; version="1.2"; sha256="0i9zqbh0l9a9mv4558gbdq9mh52chanykyfwmiymmxygxhp809sz"; depends=[locfit statmod]; }; - mclogit = derive2 { name="mclogit"; version="0.8.6.4"; sha256="09n5kn3ylcml73pkyw2b97wp3xay75qjsfb588hs5j4rls0wj1qc"; depends=[Matrix memisc]; }; + mclogit = derive2 { name="mclogit"; version="0.8.7.3"; sha256="1as3mqqzxjdr7saw4vpgg88yqbax86z1qhl9s1jm49cw7nyqigxz"; depends=[Matrix memisc]; }; mclust = derive2 { name="mclust"; version="5.4.7"; sha256="08scl72llpinfijiyx14yqvmx8lma9jvh8h92v9ynnzfr9kadxa5"; depends=[]; }; mclustcomp = derive2 { name="mclustcomp"; version="0.3.1"; sha256="0jdfdmgd46w7b38nbpd0lj9vqzi2nnf8fv0crj08lfin5ng7jvaa"; depends=[Rcpp RcppArmadillo Rdpack]; }; mcmc = derive2 { name="mcmc"; version="0.9-7"; sha256="0q42m8ab7b6bxhns494ksjdss5f3c5m2jjfdlfj6fk1nz7ax7i5p"; depends=[]; }; mcmcOutput = derive2 { name="mcmcOutput"; version="0.1.1"; sha256="0nw33xb7x695g8i91hfj2apgywbyzf2k587drzridqnfmbm26pni"; depends=[coda HDInterval MASS]; }; - mcmcderive = derive2 { name="mcmcderive"; version="0.1.0"; sha256="1q26fnkm8ysfgbn1f0i2qajm1jrfslplx6jdg76bdc83iqwblpd6"; depends=[abind chk extras mcmcr nlist purrr term universals]; }; - mcmcensemble = derive2 { name="mcmcensemble"; version="2.0"; sha256="06aw2l94pxihv80rrs7dq2b2kvdpy0zpxxzvp7jlp3aky1n30vih"; depends=[]; }; + mcmcderive = derive2 { name="mcmcderive"; version="0.1.1"; sha256="01fg52067h209h1ds2krk1yldad3bv2bk3217z80cny84zdpyb0f"; depends=[abind chk extras mcmcr nlist purrr universals]; }; + mcmcensemble = derive2 { name="mcmcensemble"; version="3.0.0"; sha256="1yf8mm0nmw0x89pj3is5rv3arcfbxvkfh8bip1sprcqzsrixa0s8"; depends=[future_apply progressr]; }; mcmcplots = derive2 { name="mcmcplots"; version="0.4.3"; sha256="0187z79gmvcrwqybxh3ckhcrqi0nqhvcvlczgxfkpq95y5czprdq"; depends=[coda colorspace denstrip sfsmisc]; }; - mcmcr = derive2 { name="mcmcr"; version="0.4.0"; sha256="1g839n1x359rqf6p521s0ipzdnc5wg4wdxhjs9r879vmmv8xf766"; depends=[abind chk coda extras lifecycle nlist purrr term universals]; }; - mcmcsae = derive2 { name="mcmcsae"; version="0.5.0"; sha256="0ai1m2kxspk5c5pcn5vxca26dyvrhiaaqmq6h56qy18q4lrq700h"; depends=[GIGrvg loo Matrix matrixStats Rcpp RcppEigen]; }; + mcmcr = derive2 { name="mcmcr"; version="0.5.0"; sha256="1p67j8vhb3pslny8c31gnp44r39f3qvy50ipl7r8gcn4kqqd0zaq"; depends=[abind chk coda extras generics lifecycle nlist purrr term universals]; }; + mcmcsae = derive2 { name="mcmcsae"; version="0.6.0"; sha256="013cyw01rgaywwg7v75wb8imi8jihlhmlc1ip350r5h7ypcksirn"; depends=[GIGrvg loo Matrix matrixStats Rcpp RcppEigen]; }; mcmcse = derive2 { name="mcmcse"; version="1.4-1"; sha256="05sxz2bjb1y389vrmykcn6hwhgpykzpnh94aq34mbpqdsrb1y63b"; depends=[ellipse Rcpp RcppArmadillo]; }; mco = derive2 { name="mco"; version="1.15.6"; sha256="10h5d2lw6ybyva44nn5wml6v3ljpnv9m1b2lh36vg2cwrdwy5sqp"; depends=[]; }; mcompanion = derive2 { name="mcompanion"; version="0.5-3"; sha256="0051agyzbhrsxi9wpfpqcq98h7y25627s2czf30qxcq80m7xbhj0"; depends=[gbutils MASS Matrix Rdpack]; }; mcp = derive2 { name="mcp"; version="0.3.0"; sha256="1dgdhspbqc6w7rcplryjy9jjzdpm480rwngn6ri7kjl8bk70hll2"; depends=[bayesplot coda dplyr future future_apply ggplot2 loo magrittr patchwork rjags rlang stringr tibble tidybayes tidyr tidyselect]; }; mcparallelDo = derive2 { name="mcparallelDo"; version="1.1.0"; sha256="1ivh0d4f7ks6xwcjywk62h1zhr7h5bbhzpisky7973wi4g8vipbn"; depends=[checkmate R_utils R6]; }; - mcprofile = derive2 { name="mcprofile"; version="1.0-0"; sha256="169dhwspwfx864l312vagmrikknlhwbc55g31a7764aclc4sgd26"; depends=[ggplot2 mvtnorm quadprog]; }; - mcr = derive2 { name="mcr"; version="1.2.1"; sha256="0237w41xichd418ax9xviq4wxbcc6c0cgr5gvzkca67nnqgc4jaz"; depends=[]; }; + mcprofile = derive2 { name="mcprofile"; version="1.0-1"; sha256="118n3pxzjm4j9y09d1n2hw7pm0b8b0m8mnm5v9kq76vignklh75l"; depends=[ggplot2 mvtnorm quadprog]; }; + mcr = derive2 { name="mcr"; version="1.2.2"; sha256="0n1wd8z7j9s20ym8m6vbpixibmfb3qkykb3z92jv3pbamjf2sxsc"; depends=[]; }; + mcreplicate = derive2 { name="mcreplicate"; version="0.1.1"; sha256="1wmrxm2ddfaj9jnzcndkcc2yh7s3r78cc717d8almld71hrnjbgc"; depends=[]; }; mcsm = derive2 { name="mcsm"; version="1.0"; sha256="13sx7s3ywis5n4a70ld2szld9fb8jkfsc82dy6iskhy17vy8pml0"; depends=[coda MASS]; }; mctest = derive2 { name="mctest"; version="1.3.1"; sha256="1d248r9ifwl1xhvka6z69l943rvbq7s7ag6vqp9lljkcybvg75f2"; depends=[]; }; - mcunit = derive2 { name="mcunit"; version="0.3.1"; sha256="12zlm14gcfid7h9szrggwmhy54d0wk57r8w8l3p3x3yp49144v67"; depends=[Rdpack rlang simctest testthat]; }; + mcunit = derive2 { name="mcunit"; version="0.3.2"; sha256="16nnm50g87iaf058b1w5w5hphx99xplczndcbv1356f2gs2gfy6l"; depends=[Rdpack rlang simctest testthat]; }; mcvis = derive2 { name="mcvis"; version="1.0.6"; sha256="14vx9nrdsggkwp3c1jamhxx20h3byamhb8bamf04fvycvwsgibf3"; depends=[assertthat dplyr ggplot2 igraph magrittr psych purrr reshape2 rlang shiny]; }; + mcwr = derive2 { name="mcwr"; version="1.0.0"; sha256="1aqmrxjmllq1waw3pzmwhqd07q02n1h1g6c0qi1fvay4xz0rwgik"; depends=[]; }; md = derive2 { name="md"; version="1.0.4"; sha256="13z8f3p84kivk6j58fb1qpzrmml41mq9pgv9nv2gvxrhyhanzi46"; depends=[]; }; md_log = derive2 { name="md.log"; version="0.1.1"; sha256="0ix5nz38xzlhrga40hfhlfss938mrfbni2wysvz2qbpm59qxrhg0"; depends=[futile_logger]; }; mda = derive2 { name="mda"; version="0.5-2"; sha256="1hq0zhhz9klmp4zcr1w8hyn7s1h9kfg57d2l2mfm7psx459j0krl"; depends=[class]; }; mdapack = derive2 { name="mdapack"; version="0.0.2"; sha256="1dfcjh8yax06m890ql0kc2rn539z4xbhw7bq9a8cbrm7jnkq03iq"; depends=[covr curl devtools FactoMineR ggplot2 gh git2r httr knitr mice openssl pkgbuild reshape2 rlang rmarkdown roxygen2 spelling testthat VIM]; }; - mdatools = derive2 { name="mdatools"; version="0.11.2"; sha256="0nggnhp191hyjva8bkr8ixxwn32chgbshl8g6ak1vqnijr9jrrlp"; depends=[Matrix]; }; + mdatools = derive2 { name="mdatools"; version="0.11.5"; sha256="0s8kmmz2k1bmrf5rhyrnlk41v97qqh3nr7x256qindc2snskxl8z"; depends=[Matrix]; }; mdbr = derive2 { name="mdbr"; version="0.1.2"; sha256="1c33v2dqz1jjh730p486bi07h9m9clpcfrbvhbvwb8fslqxg76qd"; depends=[readr]; }; - mde = derive2 { name="mde"; version="0.2.1"; sha256="0d28nhj36v6v40ylg575cjw5qqizfn9ch1yc4hffd6gzk35q441q"; depends=[dplyr tidyr]; }; + mde = derive2 { name="mde"; version="0.3.0"; sha256="17r9sbhlh4haicgxjwmmnl6xgjyi1xl9nlqh1lfmj5qc4wd5yaxd"; depends=[dplyr tidyr]; }; mded = derive2 { name="mded"; version="0.1-2"; sha256="1j8fcz5yc70p9qd9l010xj1b625scdps8z1pqh75b45p2hiqbhlc"; depends=[]; }; mdendro = derive2 { name="mdendro"; version="1.0.1"; sha256="0pk7b7zn9afc947parkj1qa4d85gq16lalg07fjfripxjnmvjahw"; depends=[rJava]; }; - mdftracks = derive2 { name="mdftracks"; version="0.2.0"; sha256="0l8dc6ljrhbm8jwadaa3xkf6nx90vyiig15p7rryswczz9hw5ga6"; depends=[hellno]; }; + mdftracks = derive2 { name="mdftracks"; version="0.2.1"; sha256="0j1j3dbl5g8zv59ppyvnxp39vpd24ygxbdhnavjwnw1v1fpippbf"; depends=[]; }; + mdgc = derive2 { name="mdgc"; version="0.1.4"; sha256="1cqimfr61hw4bk3jwd81b2q206p61dqaf19dn0f7bmizgyqixg7g"; depends=[BH psqn Rcpp RcppArmadillo testthat]; }; mdhglm = derive2 { name="mdhglm"; version="1.8"; sha256="1myky8d2ilwdliqrzd2i5qvja82iz7w6qbigl7h4znpk8pdgrjb3"; depends=[boot Matrix mvtnorm]; }; mdir_logrank = derive2 { name="mdir.logrank"; version="0.0.4"; sha256="0bhsr005dq9v85sjm2g9xlpksxwzsmsk14g0q5v3hkjvm5wk6xmv"; depends=[MASS]; }; - mdmb = derive2 { name="mdmb"; version="1.4-12"; sha256="1ll3yjvdkrjz4jzp34cmsq18lnki4df50cd68wlrbygmnjgjmq35"; depends=[CDM coda miceadds Rcpp RcppArmadillo sirt]; }; + mdmb = derive2 { name="mdmb"; version="1.5-8"; sha256="0m0fgvz2cmwxqpsrb8ir8vrmb9y99ddc24s9g08w68cakig6pd19"; depends=[CDM coda miceadds Rcpp RcppArmadillo sirt]; }; mdpeer = derive2 { name="mdpeer"; version="1.0.1"; sha256="1vsqhah8h47s8k687fwa352549mdz16mwk1g7rcmhx75c2k85w2q"; depends=[boot ggplot2 glmnet magic nlme nloptr psych reshape2 rootSolve]; }; mds = derive2 { name="mds"; version="0.3.2"; sha256="1r4cz49h1sp1kl1sjqapadhd49lpdnr48w9xbwgpfh2ghwxfcval"; depends=[lubridate parsedate]; }; mdsOpt = derive2 { name="mdsOpt"; version="0.5-1"; sha256="01gcrlmcgi1phz4952bkbf2xzd2j06lq1d6cn3nf3jz9sy5xy7f8"; depends=[animation clusterSim plotrix smacof smds spdep symbolicDA]; }; mdscore = derive2 { name="mdscore"; version="0.1-3"; sha256="10cl5r6kd9chdik5v0q91x40xpw2cjvvyi220z4bvngpb0989x8j"; depends=[MASS]; }; mdsdt = derive2 { name="mdsdt"; version="1.2"; sha256="0nbzc54jac4wmfyrs821ycxh749cb1zfxcws0nbpk35rydqkc627"; depends=[ellipse mnormt polycor]; }; - mdsr = derive2 { name="mdsr"; version="0.2.3"; sha256="0hwv4jgxd3pjczd7zppp16k0pc0z5ifdfk5gx73f0x21gpcf3k0n"; depends=[babynames DBI dbplyr downloader dplyr fs ggplot2 htmlwidgets kableExtra RMySQL skimr stringr tibble webshot]; }; + mdsr = derive2 { name="mdsr"; version="0.2.5"; sha256="0mw6kpd2p0yqkjjl1jy6bhc8dy2skxiq0k204y8kzr0l9rqk76zs"; depends=[babynames DBI dbplyr downloader dplyr fs ggplot2 htmlwidgets kableExtra RMySQL skimr stringr tibble webshot]; }; mdthemes = derive2 { name="mdthemes"; version="0.1.0"; sha256="1k0fylg8jz0xdfwq85wap6lgrb9zi219vhmry4lysqssx2szkngk"; depends=[cowplot ggplot2 ggtext ggthemes hrbrthemes tvthemes]; }; mdw = derive2 { name="mdw"; version="2020.6-17"; sha256="0jjajgb1w3vx7vqn2z90xq39hvbcrrd2ky8p31g5absqwwm7lwpa"; depends=[kyotil MASS Matrix]; }; meaRtools = derive2 { name="meaRtools"; version="1.0.4"; sha256="1nxyvdq4670696mhg0svxxlvk9hnr8szai8b18pw6754kmw1bjvn"; depends=[emdist ggplot2 gridExtra gtools lattice plyr Rcpp reshape2]; }; @@ -11018,14 +11448,17 @@ in with self; { meanr = derive2 { name="meanr"; version="0.1-2"; sha256="0w9jgncbnf82x747pxrpbbbvajmksc1dq79cc4hxr2cpvqsqyfsh"; depends=[]; }; meantables = derive2 { name="meantables"; version="0.1.0"; sha256="1007w4vjb472v15ny1h8dxdzxhddk4z5s5n77ayvcbwpc8nlzmk7"; depends=[dplyr rlang tibble]; }; measuRing = derive2 { name="measuRing"; version="0.5"; sha256="0yblqkv5444y75jkb6d0zs728i6vybm294h7b5622pwfjqlfhnh2"; depends=[dplR pastecs png tiff]; }; + measurementProtocol = derive2 { name="measurementProtocol"; version="0.1.0"; sha256="0vyfkrlinwq2930xqwp1hb8g7g3q7h7yg6y0c8gkwgscrxswifhg"; depends=[assertthat cli httr jsonlite rappdirs]; }; measurements = derive2 { name="measurements"; version="1.4.0"; sha256="1kihavs9vgxwqjm9z1zjjngkmcwfsv8dg7nn9nrv5r06k5hv8bz6"; depends=[]; }; - measures = derive2 { name="measures"; version="0.2"; sha256="1pp6nz30fbsqsvznim9j4vvz3z57sq5r234807flxfy0w7knydbd"; depends=[]; }; + measures = derive2 { name="measures"; version="0.3"; sha256="0325hhncg9fhq28cfl1hk6rhcmzzcngsmnkmbn9ri3b4hwqlafal"; depends=[]; }; meboot = derive2 { name="meboot"; version="1.4-8"; sha256="10kii09v1nm7m3sqn1wsszc5m0zn0bkip9zjpvn84xdf3nz9kp8b"; depends=[dynlm nlme tdigest]; }; + mecor = derive2 { name="mecor"; version="0.9.0"; sha256="0g04rwbgyp316yk7qympk312b6k133cvwb65asflhfjb80kil4kx"; depends=[lme4 lmerTest numDeriv]; }; medExtractR = derive2 { name="medExtractR"; version="0.2"; sha256="17fc54w1jizqji27xsyiq6v31q8r86sps1nl6mgqsi5h7mzni98g"; depends=[stringr]; }; mederrRank = derive2 { name="mederrRank"; version="0.0.8"; sha256="1fvvik3bhjm6c0mhi2ma915986k2nj3lr2839k5hfrr7dg3lw3f4"; depends=[BB numDeriv]; }; medfate = derive2 { name="medfate"; version="1.1.0"; sha256="1cq83phvbirw7q8ik9jiv7y1jk59yjjs2r09qcj7jqsy7gb5qa6j"; depends=[ggplot2 httr jsonlite meteoland Rcpp sp spdep]; }; medflex = derive2 { name="medflex"; version="0.6-7"; sha256="171vp0wmmmbz42xcwjy065vhvig49s4ac2hzawfww2mvpfj0g0fj"; depends=[boot car Matrix multcomp sandwich]; }; mediacloudr = derive2 { name="mediacloudr"; version="0.1.0"; sha256="1r11mpz44msla71lqw45r9s8z7rwvbnqi026l0ljx6crby183h0w"; depends=[httr jsonlite rvest xml2]; }; + mediateP = derive2 { name="mediateP"; version="0.1.0"; sha256="0xz07kvpyczhjgvli1f6d9k5khj9zwnwy51gakj3zm85nq64kxyn"; depends=[boot]; }; mediation = derive2 { name="mediation"; version="4.5.0"; sha256="0i88wvqqw8cmxmh9i78rqzp4s16zhf12dgl9fsk9bhw7hxhhc0i1"; depends=[boot Hmisc lme4 lpSolve MASS Matrix mvtnorm sandwich]; }; mediationsens = derive2 { name="mediationsens"; version="0.0.2"; sha256="1wvd9kcz4sh0ylydp8q49013i408bn9w5m5ihg0s5r0489359385"; depends=[distr mediation]; }; medicalrisk = derive2 { name="medicalrisk"; version="1.3"; sha256="12p3mjy6lphjajxz7is04cahp0598ip9ixfkdimvw1k8n5hs9mj0"; depends=[hash plyr reshape2]; }; @@ -11033,7 +11466,9 @@ in with self; { meditate = derive2 { name="meditate"; version="0.1.3"; sha256="02mgnbxlvi73zpnghlcx89jvri8144cf0bzq0hrbhh2nq2c1sdjg"; depends=[audio checkmate deldir wesanderson]; }; meditations = derive2 { name="meditations"; version="1.0.1"; sha256="0wnx3zadpngfch0sb0ifqvsmzl613639f1yazwsgvhk29mycx4ss"; depends=[]; }; medmod = derive2 { name="medmod"; version="1.0.0"; sha256="1f7bzdcjnbz9izlfblxcaa85qxx8kzn62qgjd3qlb7jl7mdy5q54"; depends=[ggplot2 jmvcore lavaan R6]; }; - medrxivr = derive2 { name="medrxivr"; version="0.0.4"; sha256="0jsfak1kp06j8n4d6y3d3dhnj25kxwns1l38an6gkm3dgmc5a30r"; depends=[bib2df curl dplyr httr jsonlite lubridate progress rlang stringr tibble vroom]; }; + medrxivr = derive2 { name="medrxivr"; version="0.0.5"; sha256="19gakl39n2jch84sv35jkk4g2c0k4h3ch3l3hz1w5p94mn2jlgqr"; depends=[bib2df curl data_table dplyr httr jsonlite lubridate progress purrr rlang stringr tibble vroom]; }; + meedr = derive2 { name="meedr"; version="0.0.1"; sha256="0dskd2j68ddccpyx9044nv2ls1x1pj8dsn2hgxj5niw1wffsfkgq"; depends=[dplyr furrr future httr jsonlite lubridate memoise purrr]; }; + meerva = derive2 { name="meerva"; version="0.1-2"; sha256="1f7p504hyfsdf3w13l4l8m3xs4kd2yj7d0k0cnipv1hkpvph76c2"; depends=[dplyr ggplot2 survival tidyr]; }; meetupapi = derive2 { name="meetupapi"; version="0.1.0"; sha256="1iaxpfzgn478np9cjwz0zalfy1p7jwabnwpfv31svw052i8bs9yl"; depends=[dplyr httr magrittr purrr]; }; mefa = derive2 { name="mefa"; version="3.2-7"; sha256="1qrf6d3y38q7yy6bg3bxg7514d9paz1f8y6sr7lbksi30qn92fmj"; depends=[]; }; mefa4 = derive2 { name="mefa4"; version="0.3-7"; sha256="0iq3n77gbl3zbplaqp1nwb72y9w797m938albx27727pkzyanxf1"; depends=[Matrix]; }; @@ -11042,43 +11477,45 @@ in with self; { meltt = derive2 { name="meltt"; version="0.4.1"; sha256="1113rdw0jglwkcd3g31llhgzqmwpxfz2bp60m3x2zdbdrvwc1z9n"; depends=[dplyr ggplot2 leaflet plyr Rcpp RcppArmadillo reticulate shiny shinyjs tibble tidyr]; }; mem = derive2 { name="mem"; version="2.16"; sha256="16xm9hai1aqhrbpxln6az4qbwz3kk2izmq39nzpzjc3ardpq1ljr"; depends=[boot dplyr EnvStats ggplot2 mclust purrr RColorBrewer RcppRoll sm tidyr]; }; memapp = derive2 { name="memapp"; version="2.14"; sha256="0w2lbypz0bc50s6yrvidz96wpz53cxpk5a9yhbq7rp8chr9r8cm3"; depends=[dplyr DT foreign formattable ggplot2 haven mem openxlsx plotly RColorBrewer readxl RODBC shiny shinyBS shinydashboard shinyjs shinythemes shinyWidgets stringi stringr tidyr]; }; - meme = derive2 { name="meme"; version="0.2.2"; sha256="1q78q8080vvqni8ncqp326pidfjfia0f2b6pis08m7fr1q1gcqca"; depends=[ggplot2 gridGraphics magick showtext sysfonts]; }; - memery = derive2 { name="memery"; version="0.5.2"; sha256="1hr52g69lr2n84yczm8i8yxh7rys5nr8jk1hcmv548p5y79l8k9s"; depends=[Cairo colourpicker cowplot ggplot2 jpeg magrittr png purrr shiny shinyBS shinycssloaders showtext sysfonts]; }; + meme = derive2 { name="meme"; version="0.2.3"; sha256="009gkl9zmj2s6wmd7rl0khf04m05zcbbjjds2w7krnbr8h0dqpqm"; depends=[ggplot2 gridGraphics magick showtext sysfonts]; }; + memery = derive2 { name="memery"; version="0.5.6"; sha256="0rlq0pjl13wsc025z3ycd5m48lnlagw61fbn51x9npysrmii4rvh"; depends=[Cairo colourpicker cowplot ggplot2 jpeg magrittr png purrr shiny shinyBS shinycssloaders showtext sysfonts]; }; memgene = derive2 { name="memgene"; version="1.0.1"; sha256="1x3vf2f1yh40xw5vqcjlrn07zn9zh3sx4kc9dijxzygd9crl5a29"; depends=[ade4 gdistance raster vegan]; }; + memify = derive2 { name="memify"; version="0.1.1"; sha256="1dnbaz57v50mg2kxn5y7cdfrsv1h046cwqh48mpabgh6vf018w4y"; depends=[]; }; memisc = derive2 { name="memisc"; version="0.99.27.3"; sha256="0cv8pv1852p2mkxxzyzfqp9l2yr2nyrzzqbj22rxk01za1gjcg32"; depends=[data_table lattice MASS repr]; }; memo = derive2 { name="memo"; version="1.0.1"; sha256="14nvqi1qsin45ksd0wp9cigjk1gghr4jijdqkaqh177dwa244r9j"; depends=[digest]; }; memochange = derive2 { name="memochange"; version="1.1.1"; sha256="144134kpchb7ps8b2g7pyga5add0iqphzcwygf11aybmbzmp90x7"; depends=[forecast fracdiff longmemo LongMemoryTS sandwich strucchange urca]; }; - memoise = derive2 { name="memoise"; version="1.1.0"; sha256="034qfc2xlh30x1q2vya239w34a3ir3y2fwnx2agbgbi6592zjxmj"; depends=[digest]; }; - memor = derive2 { name="memor"; version="0.2.2"; sha256="0b386l4aclj86rhzzhmi8dmkkbcd1pwaj3as0lc11q0nj2gjrs7i"; depends=[knitr rmarkdown yaml]; }; + memofunc = derive2 { name="memofunc"; version="1.0.2"; sha256="02y32mnwafqnsvs3vy4g8v0jmdvnx935dqavy3q1f2n8c76p0bk9"; depends=[digest magrittr uuid]; }; + memoise = derive2 { name="memoise"; version="2.0.0"; sha256="1bzcv7pmls3bx2w5ccv1pm20wycbfqba1v76k0fjgmjsm6hy76pz"; depends=[cachem rlang]; }; + memor = derive2 { name="memor"; version="0.2.3"; sha256="1b3rjh121in7gi6khbhh2d1r0998a24ifcg6hpv8cdksl6lhm330"; depends=[knitr rmarkdown yaml]; }; memoria = derive2 { name="memoria"; version="1.0.0"; sha256="05nx6xkgf1mkn1ajjizwp66xhn7ddbvgdnmkdbcl4s7sq456vczw"; depends=[cowplot ggplot2 HH ranger stringr tidyr viridis viridisLite zoo]; }; memuse = derive2 { name="memuse"; version="4.1-0"; sha256="1bbjp8y0ji71956fbaxiil7ynq2nkmmgz7i9xps83m3bbp5d3mjq"; depends=[]; }; - merDeriv = derive2 { name="merDeriv"; version="0.2-2"; sha256="0n4crlxgjp58w5jb8fm01k4b9i8yflr875xajr4dayc6764wiism"; depends=[lavaan lme4 Matrix nonnest2 numDeriv sandwich]; }; + merDeriv = derive2 { name="merDeriv"; version="0.2-3"; sha256="0f8g3n4hpkf58sryvirdjyjq0x06yqzhdkp9wp4cfwkfz7aawjsh"; depends=[lavaan lme4 lmeInfo Matrix nonnest2 numDeriv sandwich]; }; merTools = derive2 { name="merTools"; version="0.5.2"; sha256="1ka9aa3fgs1kqfqhi1sz6v6g5mbbbzxyb7c0n8s981g8d04vsi00"; depends=[abind arm blme broom_mixed dplyr foreach ggplot2 lme4 mvtnorm shiny]; }; mergeTrees = derive2 { name="mergeTrees"; version="0.1.3"; sha256="17aqgfd1ky5zq6i9s1djvdqjdd8lzkblf0cdw82i9mpzfhcz1fav"; depends=[Rcpp]; }; - mergedblocks = derive2 { name="mergedblocks"; version="1.0.0"; sha256="0g209f9vr5gjgsljnb6i8jr48azv982dbfc1anggfip82qivicqn"; depends=[randomizeR]; }; + mergedblocks = derive2 { name="mergedblocks"; version="1.1.0"; sha256="0hgfyb99hdph4rx32072v40j3z56bwl8lvpxqmms783b997alaml"; depends=[randomizeR]; }; merlin = derive2 { name="merlin"; version="0.1.0"; sha256="11in84pxgz76l2cfpd7m03fai1gwdhp2rzrn3pbwrpywgq210pmj"; depends=[MASS randtoolbox statmod survival]; }; merror = derive2 { name="merror"; version="2.0.2"; sha256="13d9r5r83zai8jnzxaz1ak40876aw20zbpr244gs55rvj5j7f87q"; depends=[]; }; messaging = derive2 { name="messaging"; version="0.1.0"; sha256="0q19cqp1zgh0yhk1ql0jqf414bhx6jwhkairq6wx2cmkli2g7k1y"; depends=[dplyr glue magrittr rlang stringr]; }; met = derive2 { name="met"; version="0.1.0"; sha256="0714103xzc4n178307czxmcv7ygjiigjr9b6xnj240ljp7qmln19"; depends=[DiPs]; }; - metR = derive2 { name="metR"; version="0.9.0"; sha256="0s8gnjlc9h0y4dlkj9jk4z4d182spf37mlzykiz4gqxl19sfbbri"; depends=[checkmate data_table digest fields Formula formula_tools ggplot2 gtable isoband lubridate memoise plyr purrr RCurl scales sp stringr]; }; + metR = derive2 { name="metR"; version="0.9.1"; sha256="1f8x4rfyd5f4idrzj28wg9mp7bkqpjrc5a2kd97vh8iljn87izaz"; depends=[checkmate data_table digest fields Formula formula_tools ggplot2 gtable isoband lubridate memoise plyr purrr RCurl scales sp stringr]; }; metRology = derive2 { name="metRology"; version="0.9-28-1"; sha256="1syjwblyd18myxrs0hx4m91fgb6zs3r4g7w701j2f2pw6j9mvz0y"; depends=[MASS numDeriv robustbase]; }; metScanR = derive2 { name="metScanR"; version="1.2.3"; sha256="1v7zrxj3wspx6f5n5s75skcygbf3r85rn4p0z9iwbrbrgxwi4qgs"; depends=[geosphere leaflet matlab plyr RCurl]; }; - meta = derive2 { name="meta"; version="4.15-1"; sha256="1hggaw1nlyvsz5w8rhj305b2qm2jc183bmv76nimcdsbk7hvcsqb"; depends=[CompQuadForm lme4 metafor xml2]; }; + meta = derive2 { name="meta"; version="4.18-0"; sha256="1dia3g42fhpwxiy2az6cr4cq7jdzf6rlf69g7cxvrrkvd5bhdnqa"; depends=[CompQuadForm lme4 metafor xml2]; }; meta4diag = derive2 { name="meta4diag"; version="2.0.8"; sha256="1ila8x9r1rdmlwfpzfx1zj5yx1m4yrbhyb74db4wqbh1dswn7zsm"; depends=[caTools shiny shinyBS sp]; }; metaBLUE = derive2 { name="metaBLUE"; version="1.0.0"; sha256="0ppn4bvr10z32pghmv4wjv86k6n5y5bkfxc6h5mvb556v6jnl6d8"; depends=[Matrix]; }; - metaBMA = derive2 { name="metaBMA"; version="0.6.5"; sha256="1fx5xn2in4zbjrjakgfhmf298xz7z0afyl9arfzf0ii777mkc453"; depends=[BH bridgesampling coda LaplacesDemon logspline mvtnorm Rcpp RcppEigen rstan rstantools StanHeaders]; }; + metaBMA = derive2 { name="metaBMA"; version="0.6.7"; sha256="1nk76cw3wb8gwknn5xq75400pfbqx72rf499nylc6yr9nascq2rk"; depends=[BH bridgesampling coda LaplacesDemon logspline mvtnorm Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; metaDigitise = derive2 { name="metaDigitise"; version="1.0.1"; sha256="1cwvb6b4a1pfixbknbjjylsmpkccgi163h0kbf7zfjaqjg2y9mzh"; depends=[magick purrr]; }; metaEnsembleR = derive2 { name="metaEnsembleR"; version="0.1.0"; sha256="1vxrzdm4j3h91h0fvps36a8xhs1b8cylw2cw2mhvg20lpcjjdsdv"; depends=[caret e1071 gbm ggplot2 gridExtra randomForest]; }; metaLik = derive2 { name="metaLik"; version="0.43.0"; sha256="1li40pgd9z00nrph9njwn6wysb1i9dkpqzcp6fzds6asvcxlqqfl"; depends=[]; }; metaMA = derive2 { name="metaMA"; version="3.1.2"; sha256="1mjyz06q1kc8lhfixpym4ndpnisi1r849fj3da6riwfd6ab1v181"; depends=[limma SMVar]; }; metaMix = derive2 { name="metaMix"; version="0.3"; sha256="17qkwg9iz5v63ybyvqppbf044l0pi0ym5pw283174dlx8lfac60q"; depends=[data_table ggplot2 gtools Matrix Rmpi]; }; metaRMST = derive2 { name="metaRMST"; version="1.0.0"; sha256="1mq9j7iczjh7d3cps9g1bh0f8k388bdn8d5lkjs2s8y9fq1kxzmx"; depends=[meta mvmeta rstpm2 survival survRM2]; }; - metaRNASeq = derive2 { name="metaRNASeq"; version="1.0.3"; sha256="1zby60kw1kdsc06g3xx5ck20nfm1yavvg5w7gq0m2d2hd1nhlim6"; depends=[]; }; + metaRNASeq = derive2 { name="metaRNASeq"; version="1.0.5"; sha256="1a561iwgb64g536h09z6bn6fms5s9gxs02yp4f2ayy7l1srcsc6y"; depends=[]; }; metaSDTreg = derive2 { name="metaSDTreg"; version="0.2.1"; sha256="0nqnb0isjz2czvih6zr4jglrwfmf9ahm9a3nwkvr2cwbmdh5clq2"; depends=[Matrix maxLik ordinal truncnorm]; }; metaSEM = derive2 { name="metaSEM"; version="1.2.5"; sha256="05lmangh8fggyfiad2qnrfh1mw3za3xjac5d5dcffimqlbm8hmb3"; depends=[ellipse lavaan MASS Matrix mvtnorm numDeriv OpenMx]; }; metaSurvival = derive2 { name="metaSurvival"; version="0.1.0"; sha256="05f103fi287y64gys73a55snw54bnph69q8dykfii10dykd44g0y"; depends=[mvtnorm survival]; }; metabolic = derive2 { name="metabolic"; version="0.1.0"; sha256="1bk8d0sxlgc17d7x02zmx23fdqz39c9zpin16bzhcj602kjcq0y8"; depends=[cli dplyr forcats ggfittext ggimage ggplot2 glue magrittr meta patchwork purrr rmarkdown scales stringr tibble tidyr usethis]; }; - metabolighteR = derive2 { name="metabolighteR"; version="0.1.1"; sha256="0mldfmkq1600h17qxfwy7llpijwdgal8n8nf4ya1ria3nvyvjl3k"; depends=[crayon dplyr httr magrittr purrr]; }; + metabolighteR = derive2 { name="metabolighteR"; version="0.1.2"; sha256="1v50b0pp2hzn6b4xrlclaks3kd315rir44acm24mmqhqybj6lhls"; depends=[crayon dplyr httr magrittr purrr]; }; metacart = derive2 { name="metacart"; version="2.0-3"; sha256="1wim72fvhx6cyc16c9gl8cwzbhlpzilk7q8gi4jnzzazqmc1kb5n"; depends=[ggplot2 gridExtra Rcpp rpart]; }; metacoder = derive2 { name="metacoder"; version="0.3.4"; sha256="0qnsn6zpk9vf5p4jj0pdkldi0p7a1rjccdrk68qswy04dlsq15vg"; depends=[ape biomformat cowplot crayon dplyr GA ggfittext ggplot2 ggrepel igraph lazyeval magrittr phylotate RColorBrewer Rcpp RCurl readr reshape reshape2 rlang scales seqinr stringr svglite taxa taxize tibble traits vegan viridisLite zoo]; }; metacom = derive2 { name="metacom"; version="1.5.3"; sha256="0c0gzn28cl2sl52wx2n36jm9c18d9s3yqjyx88kgbmd9069z1nvk"; depends=[vegan]; }; @@ -11090,24 +11527,27 @@ in with self; { metaforest = derive2 { name="metaforest"; version="0.1.3"; sha256="1q6m60cd7gl7y0gdjd10ky25hwv5jc4x5g5sr5w61xc3j2hnw8in"; depends=[data_table ggplot2 gtable metafor ranger]; }; metafuse = derive2 { name="metafuse"; version="2.0-1"; sha256="1zdw22f5kzvy2xr3c2csy873hcags60as567brc2sw17d0apfy8j"; depends=[evd glmnet MASS Matrix]; }; metagam = derive2 { name="metagam"; version="0.2.0"; sha256="0il5m02v3fv5gl9pf3ggkv0kwaycmvvaxzxda20rg30cbhma27vy"; depends=[dplyr furrr ggplot2 knitr metafor metap purrr rlang stringr tidyr]; }; - metagear = derive2 { name="metagear"; version="0.6"; sha256="1xfpjqawnwsg2djnygzyg6ak7gylj60wlhfkkipnrpy8bbpvc8j2"; depends=[EBImage hexView MASS Matrix metafor RCurl stringr]; }; + metagear = derive2 { name="metagear"; version="0.7"; sha256="1gwfk6v591xxsccbi287b90vnf5c1jfz72jxcxy9iswp0jpjflaq"; depends=[MASS Matrix metafor stringr]; }; + metaggR = derive2 { name="metaggR"; version="0.1.0"; sha256="05y35crz2z348vb90izkb29l1rvsfl3bjn0pr9r3b1m2mxmn02j3"; depends=[MASS]; }; metaheuristicOpt = derive2 { name="metaheuristicOpt"; version="2.0.0"; sha256="0ra4hl9l1jlzymj218m2i6xrxfacyx4aaln5pk7q4di2ks0nq11m"; depends=[]; }; metajam = derive2 { name="metajam"; version="0.2.3"; sha256="0ryzsnwfhapsyz40ckjj6gn2chf37m62z3l7xv703878bghpdqwc"; depends=[dataone dplyr EML emld lubridate purrr readr rlang stringr tibble tidyr]; }; metamedian = derive2 { name="metamedian"; version="0.1.5"; sha256="1v2nha2qc9vs2s9nfvbia033ppprkwxj5fadlrpy20fj2lr8z7z6"; depends=[estmeansd Hmisc metafor]; }; metamer = derive2 { name="metamer"; version="0.2.0"; sha256="0wdhr83mph9v7vb9mfhf7lcwmp0smz72sniass7kxcbj6j9hga4g"; depends=[FNN progress]; }; metamicrobiomeR = derive2 { name="metamicrobiomeR"; version="1.2"; sha256="0fgdjy2s47pqmb9x79a4sf0kn4hbc49rd41jnzw0d3ll1l9kwy7f"; depends=[compositions dplyr gamlss gdata ggplot2 gridExtra lme4 lmerTest matrixStats meta plyr tidyr zCompositions]; }; metamisc = derive2 { name="metamisc"; version="0.2.3"; sha256="13hcjl0z22dfl12nip0ni5fd9jqgr2569l5300g7mhsnd45k6ijp"; depends=[ggplot2 lme4 metafor mvtnorm plyr pROC]; }; - metan = derive2 { name="metan"; version="1.11.0"; sha256="0rkaanwdjg11q4k3qw5indxpbpdisb6hx87awjsxb2360zqqxd2k"; depends=[dplyr GGally ggforce ggplot2 ggrepel lme4 lmerTest magrittr mathjaxr patchwork progress purrr rlang tibble tidyr tidyselect]; }; + metan = derive2 { name="metan"; version="1.13.0"; sha256="1crj6g8128av58qs9nip3ycjwg2ppbbbgcvk9w5cnl1cwnxg919i"; depends=[dplyr GGally ggforce ggplot2 ggrepel lme4 lmerTest magrittr mathjaxr patchwork purrr rlang tibble tidyr tidyselect]; }; metansue = derive2 { name="metansue"; version="2.4"; sha256="1ja7a3z4d764a1rcf256kmzf8xc6d8x7mqq12vzznw5ks8r2p9hk"; depends=[]; }; metap = derive2 { name="metap"; version="1.4"; sha256="19c51fa5kh4yq3v7jd8cilgv9xr59qv20xprqgmlxbfh4gc27b2z"; depends=[lattice mathjaxr mutoss Rdpack TFisher]; }; + metapack = derive2 { name="metapack"; version="0.1.2"; sha256="1rmnf6mlwwxqlpn29qjjl3vlqssd1qybfw6yhrinzannm1vfw2qj"; depends=[BH ggplot2 gridExtra Rcpp RcppArmadillo RcppProgress]; }; metaplot = derive2 { name="metaplot"; version="0.8.3"; sha256="1zw8bq2fy9m15dfc92ag0dz2k9dqrf5jbvfaycizcgsgaqd79s1c"; depends=[dplyr encode ggplot2 gridExtra gtable lattice magrittr rlang scales tidyr]; }; metaplotr = derive2 { name="metaplotr"; version="0.0.3"; sha256="01iala6cxsxv30fnlh80md5mpy3ksd2piw90zcls8f68g1c6v1jy"; depends=[ggplot2 gridExtra]; }; metaplus = derive2 { name="metaplus"; version="0.7-11"; sha256="05pkgw0zlq3q9mvdw2yxz9mxzqwq3c8q6cwvh87cigw1pf8y9an7"; depends=[bbmle boot fastGHQuad lme4 MASS metafor numDeriv]; }; metapost = derive2 { name="metapost"; version="1.0-6"; sha256="098f7sifg814mc4sb1nb4d6dlr1xms5hwyp08ksxg0i4ayf9jf3c"; depends=[gridBezier]; }; - metapower = derive2 { name="metapower"; version="0.2.1"; sha256="04hkv1v2wh92rg8izpw0g99cbhln110zdh6cijacf0lgflh2gza0"; depends=[cowplot dplyr ggplot2 knitr magrittr rlang testthat tidyr]; }; + metapower = derive2 { name="metapower"; version="0.2.2"; sha256="1r6mmdxxi83isjjyfzblwpzfgqdmfhbqmq49zm2b4jd0zvc0lfcx"; depends=[cowplot dplyr ggplot2 knitr magrittr rlang testthat tidyr]; }; metapro = derive2 { name="metapro"; version="1.5.8"; sha256="0ymbqzm317fiywzxaizddhvjzwp2wyx9y7zgbg4nrz11l3r2bp2n"; depends=[metap rSymPy]; }; + metaprotr = derive2 { name="metaprotr"; version="1.2.2"; sha256="1iz5aqd8ha0h19sa58s7xd4h26lbqp68dxy93pxnx9bj3bv615b3"; depends=[ade4 dendextend dplyr ggforce ggrepel reshape2 stringr tidyverse]; }; metarep = derive2 { name="metarep"; version="1.0.1"; sha256="0jnxx11jxj63ry0bkjlh9g2x2pr2qi24nql99iibz2ckbx8344p3"; depends=[meta]; }; - metasens = derive2 { name="metasens"; version="0.5-0"; sha256="1kyfhhwxfyrkr93jbzy73g0rscymdyi1a58knaw5cm7lb7gxqg1s"; depends=[meta]; }; + metasens = derive2 { name="metasens"; version="0.6-0"; sha256="05ghc5jajzl540knm0vzvlmp3nl0b0arm09wacxwid800sm2dzga"; depends=[meta]; }; metatest = derive2 { name="metatest"; version="1.0-5"; sha256="1h3dcs1m7606b3a41yw2lak3lrqmsbpnx67qv24wvq003apz1sfd"; depends=[]; }; metathis = derive2 { name="metathis"; version="1.0.3"; sha256="12vn0b5mmf3i5cn44zh901i6dlgd95xa09vray644lz5nmllh7l8"; depends=[htmltools knitr magrittr purrr]; }; metavcov = derive2 { name="metavcov"; version="1.1"; sha256="1x87knvypkfg0x223aiak7fy7zdlfn74crmvnqzhxf2vmxljnvnh"; depends=[corpcor]; }; @@ -11115,7 +11555,7 @@ in with self; { metawho = derive2 { name="metawho"; version="0.2.0"; sha256="1mflkrlnb1wk9vbbj621cy64s78q677d8fcnsi1ybh49k7sqmw20"; depends=[dplyr forestmodel magrittr metafor purrr rlang]; }; meteR = derive2 { name="meteR"; version="1.2"; sha256="02637d3dnfq0jv9d74y99x7ms89y3jcmkpazc44g44sa7jx4i510"; depends=[distr nleqslv]; }; meteo = derive2 { name="meteo"; version="0.1-5"; sha256="0n37plka9vsxwd03lca3h6m8dcz3f1bi46jn3bz7vyilnkq9hcdk"; depends=[gstat plyr raster rgdal snowfall sp spacetime]; }; - meteoForecast = derive2 { name="meteoForecast"; version="0.53"; sha256="15bjhkcn4zcll3cfgpzcdj0zv753x29qsjndy3h2zzqn83qywx9s"; depends=[ncdf4 raster sp XML zoo]; }; + meteoForecast = derive2 { name="meteoForecast"; version="0.54"; sha256="046c0z66hsyfrnksdq40xv3kf2di0ywv5wfb9s7b7999s694ak18"; depends=[ncdf4 raster sp XML zoo]; }; meteogRam = derive2 { name="meteogRam"; version="1.0"; sha256="167gyxjnl4dyfqs3znv8sdpkvpqdxzdqi1g730s30gycrm9snap9"; depends=[ggplot2 RadioSonde]; }; meteoland = derive2 { name="meteoland"; version="0.9.7"; sha256="0m2q451zgvimd3xx3h66c3blzp7r5waj8ddb9p8hg5aj3drq2l8p"; depends=[httr jsonlite ncdf4 Rcpp rgdal sp spdep]; }; meteor = derive2 { name="meteor"; version="0.3-4"; sha256="01009d9wpxybig4n82m48hqqg1k4x4shcjxfy8y0kk7cgfdb4naw"; depends=[Rcpp]; }; @@ -11123,6 +11563,7 @@ in with self; { methcon5 = derive2 { name="methcon5"; version="0.1.0"; sha256="08xsi6j65izxqcrlh37f2d7m3pwna1v6zvdv96mqylsjqgqmbk5x"; depends=[dplyr magrittr purrr rlang]; }; metools = derive2 { name="metools"; version="1.0.0"; sha256="05l49ifx2nnlbdxh2qhdb0islf95fc67720rm5in7mrlida4khnq"; depends=[ggplot2 lubridate scales stringr tibble tidyr]; }; metricsgraphics = derive2 { name="metricsgraphics"; version="0.9.0"; sha256="1zbx82b34y0rr4w7rzvyc1nzk95w6cdkg0j1kkshbmkvplq6v9i4"; depends=[htmltools htmlwidgets magrittr]; }; + metro = derive2 { name="metro"; version="0.9.1"; sha256="0agmwvbwhpn5nzzkyz20pspbv6i80i636fhf9sqydgl1fskknrf2"; depends=[geodist hms httr jsonlite tibble]; }; metropolis = derive2 { name="metropolis"; version="0.1.8"; sha256="031fcy0v13bvy7gg26988fvpqdsfndx2rynkhb1jvirnrf0fngy4"; depends=[coda]; }; mets = derive2 { name="mets"; version="1.2.8.1"; sha256="0prhnjqgrvw650f89sy7wj52wsd7h7gc4iqinv17j54ag8xrnhcq"; depends=[lava mvtnorm numDeriv Rcpp RcppArmadillo survival timereg]; }; metsyn = derive2 { name="metsyn"; version="0.1.2"; sha256="0iwp0nz07yd33qd93fjblmvik1l1xkv6rkccn3054zs2bkrzjq4f"; depends=[foreach readr stringr tibble]; }; @@ -11130,7 +11571,8 @@ in with self; { mewAvg = derive2 { name="mewAvg"; version="0.3.0"; sha256="16gc78ccjffp9qgc7rs622jql54ij83ygvph3hz19wpk22m96glm"; depends=[]; }; mexhaz = derive2 { name="mexhaz"; version="1.10"; sha256="0bgnixbl3birn1xdbxdahs9204manr64afwy8wxhz3b2qpa3fhyi"; depends=[lamW MASS numDeriv statmod survival]; }; mfGARCH = derive2 { name="mfGARCH"; version="0.2.0"; sha256="19v0kqn70h42vsyg4ldi5qivhwh97zk8shvahdzxbcqjjig6lylh"; depends=[maxLik numDeriv Rcpp zoo]; }; - mfbvar = derive2 { name="mfbvar"; version="0.5.4"; sha256="1rarmlfb8fpc8zwydzf198w8z5wrw7gnr4j93rnbr9y5c0z0pmh5"; depends=[dplyr ggplot2 GIGrvg lubridate magrittr Rcpp RcppArmadillo RcppParallel RcppProgress stochvol tibble zoo]; }; + mfaces = derive2 { name="mfaces"; version="0.1-3"; sha256="0pqmsflph2iplr0jlwpgbfgg523v0nw41gvjb88q1d993pyfhfdl"; depends=[face Matrix matrixcalc mgcv]; }; + mfbvar = derive2 { name="mfbvar"; version="0.5.6"; sha256="1wv46h6cr0xnvr8dxymx362skf7nf77yw84y6g48rj9mbq8kkkcj"; depends=[dplyr ggplot2 GIGrvg lubridate magrittr Rcpp RcppArmadillo RcppParallel RcppProgress stochvol tibble zoo]; }; mfdb = derive2 { name="mfdb"; version="6.2-0"; sha256="11xi915plc90awasmny9ynwmz0yw18frfp1q2xv7bqk4v96fcxgp"; depends=[DBI getPass logging RPostgreSQL]; }; mfe = derive2 { name="mfe"; version="0.1.5"; sha256="1pw9gw9bd778s57dyjwbmrmsla4m8dkf8g49gplv4zrsvlgsgbr3"; depends=[cluster clusterCrit e1071 ECoL infotheo MASS rpart rrcov]; }; mfp = derive2 { name="mfp"; version="1.5.2"; sha256="1i90ggbyk2p1ym7xvbf4rhyl51kmfp6ibc1dnmphgw15wy56y97a"; depends=[survival]; }; @@ -11138,11 +11580,12 @@ in with self; { mgarchBEKK = derive2 { name="mgarchBEKK"; version="0.0.2"; sha256="1k4c34srnckbh5kchzmm44l91ma9sw0gi4y225igs3cl79212q9c"; depends=[mvtnorm tseries]; }; mgc = derive2 { name="mgc"; version="2.0.2"; sha256="1l9qs4nz1rn56qp569nh26yz3c7i4zh3r43c209zh7kvizpagx0i"; depends=[abind boot energy MASS raster]; }; mgcViz = derive2 { name="mgcViz"; version="0.1.6"; sha256="12isaqpbhdg2qhw76wj6hqi233dw3md061bbirkgzr5clrb8kxlk"; depends=[gamm4 GGally ggplot2 gridExtra KernSmooth matrixStats mgcv miniUI plyr qgam rgl shiny viridis]; }; - mgcv = derive2 { name="mgcv"; version="1.8-33"; sha256="1x1bdzz2b2f05626xygwqp30b4rhblgg76hs15j9ab4fjan7pjwq"; depends=[Matrix nlme]; }; - mgee2 = derive2 { name="mgee2"; version="0.1"; sha256="1j5s5b00pm49ds6zps0cysxmv76zvjimyr6p631awvdww84az00g"; depends=[ggplot2 MASS Matrix]; }; + mgcv = derive2 { name="mgcv"; version="1.8-35"; sha256="1dyphss1bw5rd8apgxsb364rcrkdbc9pcbsa0jy95mg9g5434wvk"; depends=[Matrix nlme]; }; + mgee2 = derive2 { name="mgee2"; version="0.2"; sha256="1bhjajcjvm8brc92v6ij378i0d3vniip77m4pz7n02sgswj0w61a"; depends=[ggplot2 MASS]; }; mglmn = derive2 { name="mglmn"; version="0.1.0"; sha256="1g642hhs28q6x34xgrfrmmsb2jsn9zy4jxad0x5ai3px48zzdb4r"; depends=[mvabund snowfall]; }; - mgm = derive2 { name="mgm"; version="1.2-10"; sha256="1paiarr7g1p214k7x19njpf5xkhfpcsm5ds28l4y7qrj0jdvb5i6"; depends=[glmnet gtools Hmisc matrixcalc qgraph stringr]; }; + mgm = derive2 { name="mgm"; version="1.2-11"; sha256="07640ibqinz1l34y863r046dxlzqg7gzw58rgjiqnisxr3azr9r8"; depends=[glmnet gtools Hmisc matrixcalc qgraph stringr]; }; mgpd = derive2 { name="mgpd"; version="1.99"; sha256="0cxpgza9i0hjm5w1i5crzlgh740v143120zwjn95cav8pk8n2wyb"; depends=[corpcor evd fields numDeriv]; }; + mgss = derive2 { name="mgss"; version="1.1"; sha256="09c9ydkm47x94206267mkcdww9pp5r0p6qmhcdqclz2264hvr2ix"; depends=[combinat Matrix Rcpp rTensor statmod]; }; mgsub = derive2 { name="mgsub"; version="1.7.2"; sha256="02l1b96zv36ia0c97wgcwfhi037mbn3wy9c64hcw0n0w67yj77rr"; depends=[]; }; mgwrsar = derive2 { name="mgwrsar"; version="0.1"; sha256="13h56fgq3fs28fqh19hwbcza622xd921qnjwcgw2rjwaabqz70w5"; depends=[doParallel foreach htmltools leaflet Matrix nabor Rcpp RcppEigen sp spgwr]; }; mhazard = derive2 { name="mhazard"; version="0.1.2"; sha256="0axapk7rw8vhgmkkr4q9avmlmwi1cdyy0q70447hdp6hx9xg1fd6"; depends=[boot plot3D Rcpp RcppArmadillo rootSolve survival]; }; @@ -11155,45 +11598,51 @@ in with self; { miLineage = derive2 { name="miLineage"; version="2.1"; sha256="0660vk44ywmj0q2cw7pa2z1r039ncw693dnz7zlgc0ipwak3b0ry"; depends=[data_table geepack MASS]; }; miRNAss = derive2 { name="miRNAss"; version="1.5"; sha256="0j4yvd0j7r98m2msllszlzkzrx67a2z4xpx00zpq90hbr5jykxc4"; depends=[CORElearn Matrix Rcpp RSpectra]; }; miRada = derive2 { name="miRada"; version="1.13.8-8"; sha256="1m6rm65pv4r16r0s5ih69nr3v2rnpsvpdpk07pi7k4f7v9wck71v"; depends=[]; }; - miRecSurv = derive2 { name="miRecSurv"; version="0.0.1"; sha256="0i6ac566ldlmzrk91lv7is24fvbcxzc4pgcjfq3vazap01x9xv2k"; depends=[COMPoissonReg matrixStats stringi survival]; }; + miRecSurv = derive2 { name="miRecSurv"; version="1.0.1"; sha256="0wid9p7msfajqirs1p9r2vq6mv2270dnqkfkpff441vgd6b3pbzq"; depends=[COMPoissonReg matrixStats stringi survival]; }; miRtest = derive2 { name="miRtest"; version="1.8"; sha256="0i66s1sz7vf8p8ihfrxmag7wbkw8mlkldcp1w2figlzyhs74c85p"; depends=[corpcor GlobalAncova globaltest limma MASS RepeatedHighDim]; }; - miWQS = derive2 { name="miWQS"; version="0.2.0"; sha256="1api75d3jr4hh8b049jllnfb3kxlllziwbvvgxjhcbcr5kv2k4j8"; depends=[coda ggplot2 glm2 Hmisc invgamma MASS matrixNormal purrr rlist Rsolnp survival tidyr truncnorm]; }; - micEcon = derive2 { name="micEcon"; version="0.6-14"; sha256="1d3cdg36ighyhly5by9gl6lxkdvx2agb5cv2mf77pwwd7rpq35h3"; depends=[miscTools plm]; }; + miWQS = derive2 { name="miWQS"; version="0.4.4"; sha256="0fmcc86hiz89kdynkzppp9z0srgh4gl8327szivjxadxip4zm21i"; depends=[coda condMVNorm ggplot2 glm2 Hmisc invgamma MASS matrixNormal MCMCpack mvtnorm purrr rlist Rsolnp survival tidyr tmvmixnorm tmvtnorm truncnorm]; }; + micEcon = derive2 { name="micEcon"; version="0.6-16"; sha256="1n06an3ir0pf7xdsxnclsxjss6vc57a0yx3rvxjq6j0lssj1ys5z"; depends=[miscTools plm]; }; micEconAids = derive2 { name="micEconAids"; version="0.6-18"; sha256="0s2gkf6widdnxqqb1xjqdvji8vhdz5a4q05clbbbyq1h409q7qvl"; depends=[lmtest micEcon miscTools systemfit]; }; - micEconCES = derive2 { name="micEconCES"; version="0.9-8"; sha256="06g6z8hf7y9d942w6gya0fd5aidzfjkx3280gjygdlwpv7nlpqzv"; depends=[car DEoptim micEcon minpack_lm miscTools systemfit]; }; + micEconCES = derive2 { name="micEconCES"; version="1.0-0"; sha256="1j2ri0pjfmclklqs3z1wijcw0b57vsndc9nrw1770za6in17izwl"; depends=[car DEoptim micEcon minpack_lm miscTools systemfit]; }; micEconIndex = derive2 { name="micEconIndex"; version="0.1-6"; sha256="1ihly6qpyg1pms4nkvs6khxxqwr3fwg57i8pg0yhyy1apqxyj2xl"; depends=[miscTools]; }; micEconSNQP = derive2 { name="micEconSNQP"; version="0.6-8"; sha256="183hg4iap97is8cdaqxmnj9z8yybvpfnhg2kf85nfy1nl7b30xl2"; depends=[MASS miscTools systemfit]; }; - micar = derive2 { name="micar"; version="1.1.1"; sha256="09vpijva39fwpvdpfglwr3xmz469pnmz371ms7z5av6w2193ls5n"; depends=[httr jsonlite]; }; - mice = derive2 { name="mice"; version="3.12.0"; sha256="0i7i9r0ipn7fypzp5xv1dnr54l30b7kg38mmq1kcvj2z1mjrwpap"; depends=[broom cpp11 dplyr generics lattice Rcpp rlang tidyr]; }; + micar = derive2 { name="micar"; version="1.1.2"; sha256="1zx2x6r4m0ihwhjd2n4rmk9da7p9bpadk65h7mbb0rgvwrspkzf8"; depends=[httr jsonlite]; }; + mice = derive2 { name="mice"; version="3.13.0"; sha256="11cpyqlilakan2pwjzacb9jjlazazsqdngy237nnrj8j6mky822i"; depends=[broom cpp11 dplyr generics lattice Rcpp rlang tidyr]; }; miceFast = derive2 { name="miceFast"; version="0.6.9"; sha256="1qk9l6fk8b3wq855ai616bdzfbc6kc2jf4kns0g1p22zv7185dgm"; depends=[assertthat data_table dplyr ggplot2 magrittr Rcpp RcppArmadillo tidyr UpSetR]; }; miceMNAR = derive2 { name="miceMNAR"; version="1.0.2"; sha256="1s607icaf3c25mn8xdi3zkzmm8m7qd9a6vjdlz5j7ig2gc9f2y2d"; depends=[GJRM mice mvtnorm pbivnorm sampleSelection]; }; miceRanger = derive2 { name="miceRanger"; version="1.3.5"; sha256="07h3ah2z2nnwcs63mhlxvli9a9fsv9pnjbl5d0khgwpn7w4gmyxj"; depends=[corrplot crayon data_table DescTools FNN foreach ggplot2 ggpubr ranger]; }; - miceadds = derive2 { name="miceadds"; version="3.10-28"; sha256="099kadyaj57hk1zfkzgs4ncdc5waa2lp7pq8mjm20zgmjrqrx73h"; depends=[mice mitools Rcpp RcppArmadillo]; }; + miceadds = derive2 { name="miceadds"; version="3.11-6"; sha256="1xh977xralyivmi57c11rpbbbx24dhzwfnjq4m55ikzv2b40678j"; depends=[mice mitools Rcpp RcppArmadillo]; }; micemd = derive2 { name="micemd"; version="1.6.0"; sha256="1n8kzdf2713dw9mbzvbwl0gknzi9amdqnabfw2wmb70gsvma3f48"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; }; michelRodange = derive2 { name="michelRodange"; version="1.0.0"; sha256="1pykqb9hmpvn77k0vhfh36iyhamz9h5kpswq3ql31h9nknfy3ixi"; depends=[magrittr]; }; + miclust = derive2 { name="miclust"; version="1.2.6"; sha256="07hr45xg7hg65p40bvda9hhnag5haf1zckp93qg6d81dyf1dnr6g"; depends=[combinat doBy flexclust irr matrixStats]; }; micompr = derive2 { name="micompr"; version="1.1.0"; sha256="0qsxs35mmqx8hpszcb1z87xczh0vh0m0plqrj22af5mjjvif76n9"; depends=[]; }; microPop = derive2 { name="microPop"; version="1.5"; sha256="1gikp20n2b50fkybbg2hmlfjdcm0imjwygjsjnyv3wrjzypm2i78"; depends=[deSolve]; }; microbats = derive2 { name="microbats"; version="0.1-1"; sha256="1mahvblaiwg1xk2s34wd1ic8ddc9lh6g0azik2pd97bsf0krkyw8"; depends=[]; }; microbenchmark = derive2 { name="microbenchmark"; version="1.4-7"; sha256="1xl4m4yl4h2zcjiz8wsa7f3sh55qg2xr3sgpvz18rlix6b3173r6"; depends=[]; }; - microbial = derive2 { name="microbial"; version="0.0.17"; sha256="1wxzsy2gpk0ykhp5hkx4k69jy3mc49rx4x6i694w6z6ghix2z45w"; depends=[Biostrings broom dada2 DECIPHER DESeq2 dplyr edgeR ggplot2 ggpubr knitr magrittr MASS phangorn phyloseq plyr randomForest rlang rstatix S4Vectors SummarizedExperiment tidyr vegan]; }; + microbial = derive2 { name="microbial"; version="0.0.19"; sha256="0pf8rdr7fdfalx28hqkfzrgwdia956d3cksz58bbf75hsiay8vak"; depends=[Biostrings broom dada2 DECIPHER DESeq2 dplyr edgeR ggplot2 ggpubr magrittr MASS phangorn phyloseq plyr randomForest rlang rstatix S4Vectors SummarizedExperiment testthat tidyr vegan]; }; microclass = derive2 { name="microclass"; version="1.2"; sha256="0q6mn1hbi6nk29x2x5a1wcdqp06mjggbrpglk5i8pp4gkqlzhl8q"; depends=[dplyr microcontax microseq Rcpp RcppEigen RcppParallel rlang stringr tibble]; }; microclustr = derive2 { name="microclustr"; version="0.1.0"; sha256="04xn8p4wgmxq1jbxawq0rhx6l7y1kddlbdfid8zsi4x4arkz7hvp"; depends=[Rcpp]; }; microcontax = derive2 { name="microcontax"; version="1.2"; sha256="004g979hyg0asbah7hxr445fidil4ibw1b8pqpjdbgmpm1qgvw7y"; depends=[microseq]; }; microdemic = derive2 { name="microdemic"; version="0.6.0"; sha256="1w4zh0vagnar95l5b8cgmcvp8q7vk2iba5g8d8g2ywynqiqcx5fc"; depends=[crul data_table httpcode jsonlite tibble]; }; - microeco = derive2 { name="microeco"; version="0.3.1"; sha256="1a3fb6n2wp4pkvjgkaxq42za2k9vvnf6im7dzwfak8x40l19s1l4"; depends=[ape data_table dplyr ggplot2 magrittr R6 RColorBrewer rlang scales tibble vegan]; }; + microeco = derive2 { name="microeco"; version="0.3.3"; sha256="01s1x1npr3i53pzdv842w6w7qrl6yxnbk7svqsiaf7grm1dlb87x"; depends=[ape data_table dplyr ggplot2 magrittr R6 RColorBrewer rlang scales tibble vegan]; }; microhaplot = derive2 { name="microhaplot"; version="1.0.1"; sha256="0g15g7d19yz11nn2g0h8h2m8k1cvmpryz72pnalgv5yi58md5l5i"; depends=[dplyr DT ggiraph ggplot2 gtools magrittr scales shiny shinyBS shinyWidgets tidyr]; }; micromap = derive2 { name="micromap"; version="1.9.4"; sha256="0j3g6fbb6838k8p90x5krq7h82xsafid9yzpqgbdvzg1z3gpvjyq"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; }; micromapST = derive2 { name="micromapST"; version="1.1.1"; sha256="15ch132x3wnpf7rmy25nah7iyfxfk90p7lvavqjhrnavhjsfxbxx"; depends=[labeling RColorBrewer stringr]; }; micropan = derive2 { name="micropan"; version="2.1"; sha256="16zs6sqi2c5lwzhd5gbyddp8q4gx5r5sg0pbpk7924i8x4hh081h"; depends=[dplyr igraph microseq rlang stringr tibble]; }; microplot = derive2 { name="microplot"; version="1.0-44"; sha256="1sx3544yvv5dxpgqw1582574z1vcxh9rc82x1z37ad7ayzxyyb1v"; depends=[cowplot flextable ggplot2 HH Hmisc htmltools lattice officer]; }; microsamplingDesign = derive2 { name="microsamplingDesign"; version="1.0.7"; sha256="1cd9h331gvapa6p72mlyddrixb0jzka7q10i78fmpc2mcdl7alw0"; depends=[abind deSolve devtools ggplot2 gridExtra gtools knitr MASS matrixcalc matrixStats plyr Rcpp RcppArmadillo readr reshape2 shiny stringr]; }; - microseq = derive2 { name="microseq"; version="2.1.2"; sha256="04xsvwwbpxsqdg31w2kgydrnyxbw611blgwgly8cqvny74jgkkcg"; depends=[data_table dplyr Rcpp rlang stringr tibble]; }; - microsynth = derive2 { name="microsynth"; version="2.0.13"; sha256="1ijv7kbxl087m0wzdbzl9p74116dfwid03dlamy4b1l308azc4ag"; depends=[boot kernlab LowRankQP MASS nleqslv pracma survey]; }; + microseq = derive2 { name="microseq"; version="2.1.4"; sha256="1cjwcg4mzsn2w3js2vhfjzbjax756xbwngw9fyjn1i4zfl0l8fbz"; depends=[data_table dplyr Rcpp rlang stringr tibble]; }; + microservices = derive2 { name="microservices"; version="0.1.0"; sha256="0wrx7k3b9sa40njaqqy9giq8iash7j3ig6wc2d0f848qmlpdahdw"; depends=[config desc dplyr glue purrr withr]; }; + microsimulation = derive2 { name="microsimulation"; version="1.3.4"; sha256="1lpprq94kddymvwkrqlz3x101cp6sdz1k3y9648jib4kjhfzgnr5"; depends=[ascii BH Rcpp]; }; + microsynth = derive2 { name="microsynth"; version="2.0.31"; sha256="0wmrp9igylzp4qbvdr13r2rxfkcq9xwg8gw29j1g6kcqyq4aflds"; depends=[boot kernlab LowRankQP nleqslv pracma survey]; }; midas = derive2 { name="midas"; version="1.0.1"; sha256="1alqxk23651jnkg0xn4rpvk71z5rhvx3y0wjrgkw2qw95s7jjn72"; depends=[shiny xml2]; }; - midasml = derive2 { name="midasml"; version="0.0.5"; sha256="1y591m0h1872i3bg40fzy5vgqv92v42sshb5pq0rbddp94kb4fm8"; depends=[doSNOW foreach lubridate optimx quantreg Rcpp RcppArmadillo]; }; - midasr = derive2 { name="midasr"; version="0.7"; sha256="02kjyzbznmy0362ambnnh8vc7ywbgikk3n7705sww9p0k0pywrrx"; depends=[forecast Formula MASS Matrix numDeriv optimx quantreg sandwich texreg zoo]; }; + midasml = derive2 { name="midasml"; version="0.1.4"; sha256="1drgkcd9c10w216n80m3d5zskm1nw1wc2qfyfypl9l74rglkl9yk"; depends=[foreach lubridate Matrix mcGlobaloptim]; }; + midasr = derive2 { name="midasr"; version="0.8"; sha256="0mzyxf8q2wmbsiczkhhgigy7jmi8zr4w4a83f97va35vfhxi217k"; depends=[forecast Formula MASS Matrix numDeriv optimx quantreg sandwich texreg zoo]; }; midastouch = derive2 { name="midastouch"; version="1.3"; sha256="1pjzcf0hjfhr5p0la8pz1njw7bhfrcrzpqfsdqk2z5c6dbh4awzq"; depends=[]; }; midrangeMCP = derive2 { name="midrangeMCP"; version="3.1.1"; sha256="1yfwyglyxxk4i914m8n148cjydlcg7r16zl8acb1w8h963svirk9"; depends=[SMR writexl xtable]; }; + mifa = derive2 { name="mifa"; version="0.2.0"; sha256="1rj3ba746f8759gird0vpvyb4fl0z2ihccpiv3qkr3sc64wgplln"; depends=[checkmate dplyr mice]; }; + migest = derive2 { name="migest"; version="1.8.3"; sha256="1n4wpplcz4w8avzv0dilh14r6h80wfjdinqwiqkhr7arx1sls48l"; depends=[dplyr magrittr purrr stringr tibble tidyr]; }; + migraph = derive2 { name="migraph"; version="0.6.3"; sha256="0hcg1ij3n09flb6gwvcydqndq9m8mrg9shszikg3bpgzc2yc7v3x"; depends=[dplyr ggplot2 ggraph igraph magrittr network purrr R6 rlang tibble tidygraph tidyr]; }; migrate = derive2 { name="migrate"; version="0.3.0"; sha256="064f2bmhl0f841pkgdzpcn9k50192vmbfngdy7wg9a0h0jb40ga4"; depends=[crayon dplyr magrittr rlang stringr tibble tidyr]; }; migration_indices = derive2 { name="migration.indices"; version="0.3.0"; sha256="0h0yjcj70wzpgrv3wl1f2h2wangh1klsllq0i0935plgzw736mwd"; depends=[calibrate]; }; migrbc = derive2 { name="migrbc"; version="2.0.9"; sha256="1nbxdm70a9lvbp4sw78719hdpbqnziw1y7r4xk8i390q2c195am1"; depends=[dplyr futile_logger lubridate Rcpp stringr]; }; @@ -11202,20 +11651,19 @@ in with self; { mikropml = derive2 { name="mikropml"; version="0.0.2"; sha256="0qgycgk0rw2bp3kbv4n42nidgkhjgd2114cc23lk178qm28r17nd"; depends=[caret dplyr e1071 glmnet kernlab MLmetrics randomForest rlang rpart xgboost]; }; milorGWAS = derive2 { name="milorGWAS"; version="0.3"; sha256="1z44sbs3lmrx32wagk5rr3rc2k8iqq860fz0bi983llmgmhaqdxn"; depends=[gaston Rcpp RcppEigen]; }; milr = derive2 { name="milr"; version="0.3.1"; sha256="03hihr1w5j0mlvi5vm9m5vb9i6nyb6lsji3xmv0chpczabd85mzy"; depends=[glmnet numDeriv pipeR Rcpp RcppArmadillo RcppParallel]; }; - mime = derive2 { name="mime"; version="0.9"; sha256="107sqarmyhxlch5nrg796i5z03p9mshskisiq2fm628ajk99gkrc"; depends=[]; }; + mime = derive2 { name="mime"; version="0.10"; sha256="1xz37fizlx4w3g8kbim7vr5slqd6cmaq5sa0s4q7ayl1bahk6ckq"; depends=[]; }; mimi = derive2 { name="mimi"; version="0.2.0"; sha256="1ig34qd37my74nmlv3jcfrj7cnd55alxpf2flf2sssk2ws1y56xh"; depends=[data_table doParallel FactoMineR foreach glmnet rARPACK softImpute]; }; mimsy = derive2 { name="mimsy"; version="0.6.2"; sha256="01dy1fryrgq07jdfnxcnks97h0gq632dvqk7hnfs0f5fnx0k0vvf"; depends=[dplyr lubridate magrittr openxlsx]; }; minMSE = derive2 { name="minMSE"; version="0.3.1"; sha256="0xzd2hw7ga5fi54d35vr9n3sbnp6acak27fl4lv089sn1ig6s95p"; depends=[MASS]; }; mindicador = derive2 { name="mindicador"; version="0.1.5"; sha256="0y829cmv4sp3s6ygjy1y9ddh2pqlwi0qmndv43s0dhmjick88yyz"; depends=[crul data_table digest jsonlite memoise xts]; }; mindr = derive2 { name="mindr"; version="1.2.3"; sha256="1slglva5ipbzj748k7rxvlw6g2iqdkvyf8qnplnzcjc2qsjljd1q"; depends=[data_tree htmlwidgets jsonlite knitr]; }; mineCitrus = derive2 { name="mineCitrus"; version="1.0.0"; sha256="031nfhrsc5rlqls3vyrk18lx0pd4ssdk96cmfr4ifaciz0rgv8h2"; depends=[ggplot2]; }; - mined = derive2 { name="mined"; version="1.0-2"; sha256="1py6gylya8dhmxcyfrcwbwc5q226m041rs3cmj4q0dhqy8iy2zsw"; depends=[Rcpp RcppEigen]; }; minerva = derive2 { name="minerva"; version="1.5.8"; sha256="0k4ww3qfqrsnkccxk9dyq39xrc42g8gvj5g8drglg4fyci7jfs9h"; depends=[Rcpp RcppArmadillo]; }; miniCRAN = derive2 { name="miniCRAN"; version="0.2.14"; sha256="1i1rf97m7c8x65rfy8c26l0kbl4zq7ha1f9yi413fk9jlngxajj3"; depends=[assertthat httr igraph]; }; miniGUI = derive2 { name="miniGUI"; version="0.8-1"; sha256="0qb2fbkjwzn909yrk89d4951bwf8n05i0s265l8v2d4lpns9hc2i"; depends=[]; }; miniMeta = derive2 { name="miniMeta"; version="0.2"; sha256="03r6xwcgchw42irqr8jy5hsbv8brk6f77h4zi9qhhz3zmkryjbw2"; depends=[colourpicker jsonlite markdown meta metafor readxl rhandsontable shiny shinyjs shinyWidgets WriteXLS]; }; miniUI = derive2 { name="miniUI"; version="0.1.1.1"; sha256="1h5h2sc57h95d6bsgs95l26911g38hvjc1v50bc31xl9689l2as5"; depends=[htmltools shiny]; }; - minidown = derive2 { name="minidown"; version="0.0.2"; sha256="1id4fnnxhaiva5jb44cmabdz376sy4322y81lrimp2n9q34r0yfh"; depends=[htmltools knitr rmarkdown xfun]; }; + minidown = derive2 { name="minidown"; version="0.1.1"; sha256="1j8hnhw9q4wsd308cb438598hbm8d7ivlig5ydpwrjn5xnkysj5x"; depends=[htmltools knitr rmarkdown xfun]; }; minimalRSD = derive2 { name="minimalRSD"; version="1.0.0"; sha256="1p1jpi8lnv952k4c1wjgbgpb0hv4zg0f9qrd43cx0caibkqvhzf7"; depends=[]; }; minimap = derive2 { name="minimap"; version="0.1.0"; sha256="0y5yzic9pwpzs01gnl82syankijcjp85n22jn5zda0bp3y01r53r"; depends=[]; }; minimax = derive2 { name="minimax"; version="1.0"; sha256="1g0d9q5h1avbb0yg7ajw5330820i3n5cgkpsif754l4j3ikya8p3"; depends=[]; }; @@ -11232,6 +11680,7 @@ in with self; { mirtCAT = derive2 { name="mirtCAT"; version="1.10"; sha256="1wf4m4m3lyd57hy0v5jsci2k8cgzl087svpccmhxvp1chfjn7iw2"; depends=[lattice lpSolve markdown mirt pbapply Rcpp RcppArmadillo shiny]; }; mirtjml = derive2 { name="mirtjml"; version="1.4.0"; sha256="1zvm8acywpzi87lz0hpxmr8c9kyqkbx0490q3vlwxd90ffcdp9ml"; depends=[GPArotation Rcpp RcppArmadillo]; }; mirtsvd = derive2 { name="mirtsvd"; version="1.0"; sha256="0c06dpg0jr15hmk03s96fyp2rb6z4svihjzfs316nkl3dd03ami1"; depends=[GPArotation mirtjml]; }; + misaem = derive2 { name="misaem"; version="1.0.1"; sha256="05m7k8mgbpkv5szislvf3q45pk5f8z54ibddhi8pkhwa9w00xkjk"; depends=[MASS mvtnorm norm]; }; misc3d = derive2 { name="misc3d"; version="0.9-0"; sha256="10jf5r1x588vi54bzaqgi9mgcqlkiga2c3jvmqmk3lavc8fjksd1"; depends=[]; }; miscF = derive2 { name="miscF"; version="0.1-5"; sha256="0g6wk2zxqq6j949hnbvwmfd72y25zjfbrfrfxsj21q84w41fgjkb"; depends=[MASS MCMCpack mvtnorm R2jags]; }; miscFuncs = derive2 { name="miscFuncs"; version="1.3"; sha256="0wn7i9656km53wlml360qgpzqxlv1jsjnh4swhqgf5dyjva8i141"; depends=[mvtnorm roxygen2]; }; @@ -11249,43 +11698,44 @@ in with self; { missForest = derive2 { name="missForest"; version="1.4"; sha256="0y02dhrbcx10hfkakg5ysr3kpyrsh2d9i5b0qzhj9x5x0d5q11gp"; depends=[foreach itertools randomForest]; }; missMDA = derive2 { name="missMDA"; version="1.18"; sha256="1s7ph89y0mrksdi73nnjnxl2354401ny8ziijzf036rcsiyvl8m5"; depends=[doParallel FactoMineR foreach ggplot2 mice mvtnorm]; }; missMethods = derive2 { name="missMethods"; version="0.2.0"; sha256="0rsx7fdg0k8ajpj81ybl2jc9s8sprc2si6zx7mkvcqgw9iacrdik"; depends=[]; }; - missRanger = derive2 { name="missRanger"; version="2.1.0"; sha256="06ic99zg91ikzvmwbj05ma46rc4ayfwylv8cnj21sbr5nxw0qpz9"; depends=[FNN ranger]; }; + missRanger = derive2 { name="missRanger"; version="2.1.3"; sha256="1kk64q9ip6hhjcyrvnm5yd8ikilrvvw1vjz8166c6jb8xrqwbb2v"; depends=[FNN ranger]; }; missSBM = derive2 { name="missSBM"; version="0.3.0"; sha256="0dmmci35nriy0rxkrcn2rz93nndz836dbil9yfpdz3zvp1pyihdj"; depends=[ape corrplot ggplot2 igraph magrittr nloptr R6 Rcpp RcppArmadillo rlang sbm]; }; missingHE = derive2 { name="missingHE"; version="1.4.1"; sha256="1bxpp88rwnv4fc9lm606cczj1dx63p507sqsr71dblgsfw3aw7xy"; depends=[bayesplot BCEA coda ggmcmc ggplot2 ggpubr ggthemes gridExtra loo mcmcplots mcmcr R2jags]; }; - mistat = derive2 { name="mistat"; version="1.0-5"; sha256="1vyx918b7iv1wcnk23bnlxljwy0hglpdx5drhrs5qcd45f6jrghc"; depends=[]; }; + mistat = derive2 { name="mistat"; version="2.0.3"; sha256="068ycnnkqcmf3sracsa279lggyc1qxdkpcba7ghax0xl4y505yxj"; depends=[]; }; mistr = derive2 { name="mistr"; version="0.0.4"; sha256="0jb0qmraghn8gy1bxmfh0jnbfp0b38bxidl0cxkxg9lbfmi0irlq"; depends=[bbmle]; }; - mistral = derive2 { name="mistral"; version="2.1.0"; sha256="1cr79p8q82lpj9d0y6q24xmfkxmnlqv8ivkd0baj7fxfb1nb8sak"; depends=[DiceKriging doParallel e1071 emoa foreach ggplot2 iterators Matrix mvtnorm quadprog]; }; + mistral = derive2 { name="mistral"; version="2.2.1"; sha256="19iq9a3k7xyxafvm73ib8mj1k7ys69aznplqhidl5z8vdl92dmb7"; depends=[DiceKriging doParallel e1071 emoa foreach ggplot2 iterators Matrix mvtnorm quadprog Rcpp]; }; misty = derive2 { name="misty"; version="0.3.2"; sha256="17fqkxl9kmkjzl6axgrgk17j5ah8l1f29mf399ak3vhaccvblaqi"; depends=[haven lavaan lme4 readxl]; }; - mitml = derive2 { name="mitml"; version="0.3-7"; sha256="0yqyxkyi1kmv5k63wxj5kkg5g8igk1axk2csb4xhj6wz0p89dxy6"; depends=[haven jomo pan]; }; + mitml = derive2 { name="mitml"; version="0.4-1"; sha256="1bw92fl6xp3yvawh3nbjzs4hp4alpwj6vnv6lsysd74aqndw447c"; depends=[haven jomo pan]; }; mitools = derive2 { name="mitools"; version="2.4"; sha256="0c2x2n1p53lcw0vx4vmy5j7m2f95i7g2iwbryl89imr99rvz617j"; depends=[DBI]; }; - mitre = derive2 { name="mitre"; version="0.1.1"; sha256="1vcagpj1pibnzl66x4hppx9lhawssv869pfdgsm43sspvg63z3gr"; depends=[curl dplyr jsonlite plyr visNetwork]; }; + mitre = derive2 { name="mitre"; version="0.6.0"; sha256="036zqniv4r46gglrschmgdgagwik4j2ffbr7jrcshi0dbnafr3rp"; depends=[dplyr httr igraph jsonlite plyr RJSONIO rlang rvest stringr tidyr xml2 yaml]; }; mix = derive2 { name="mix"; version="1.0-10"; sha256="0z16ddbh79kqxi64bl1h2sd8anpgc48n9d1nyr2zlln39nhv8w8g"; depends=[]; }; mixAK = derive2 { name="mixAK"; version="5.3"; sha256="12vhg3qaz39hcc581gn0wfmcxj1yhggcsqic4ngy4gpmrg27yls0"; depends=[coda colorspace fastGHQuad lme4 mnormt]; }; - mixAR = derive2 { name="mixAR"; version="0.22.4"; sha256="1pd6885113i9d2vwxmcvls6q8lpcjbajm88s5zvdrm0rqri5kahk"; depends=[BB combinat e1071 fGarch gbutils MCMCpack mvtnorm permute Rdpack timeDate]; }; - mixComp = derive2 { name="mixComp"; version="0.1-1"; sha256="1mcpjsvdzklzlvnnw9gi0vzz0awmahgvda0vf90v4ixggy64mncg"; depends=[boot cluster expm kdensity matrixcalc Rsolnp]; }; + mixAR = derive2 { name="mixAR"; version="0.22.5"; sha256="09r6zzfckwqh9giiw7y24aip3cgdwdv2q9xx4mjbfim5hrjai81k"; depends=[BB combinat e1071 fGarch gbutils MCMCpack mvtnorm permute Rdpack timeDate]; }; + mixComp = derive2 { name="mixComp"; version="0.1-2"; sha256="01zgf31mmnjnwwji9yadfhwa49xy4i3wf0f5glifmpnvmr6d7y1d"; depends=[boot cluster expm kdensity matrixcalc Rsolnp]; }; mixEMM = derive2 { name="mixEMM"; version="1.0"; sha256="0344ay1avi37kvh5w9bknayx67yh7rflj6zhw68d2888v7cbghjy"; depends=[]; }; - mixIndependR = derive2 { name="mixIndependR"; version="0.4.3"; sha256="0kx7fh0gmxcvq27c6c40s5k2wsg84fxckqnw5aknr7v2mj8rbpcg"; depends=[data_table]; }; - mixKernel = derive2 { name="mixKernel"; version="0.4"; sha256="0bqa4inim7819pl3dr2kfzdvv7phqkjqfx3zal8mmxcjpkpxs4mf"; depends=[corrplot ggplot2 LDRTools Matrix mixOmics phyloseq psych quadprog reticulate vegan]; }; + mixIndependR = derive2 { name="mixIndependR"; version="1.0.0"; sha256="0wjzs56axdjas2a9ynw3gd78h0fgcfjpx3bk7nm895lmadyzih6y"; depends=[data_table]; }; + mixKernel = derive2 { name="mixKernel"; version="0.5"; sha256="1c11lppkxs8l23f700qkgp128a61c5v7iwr0zq6fy0jggzbz8vql"; depends=[corrplot ggplot2 LDRTools Matrix mixOmics phyloseq psych quadprog reticulate vegan]; }; mixPHM = derive2 { name="mixPHM"; version="0.7-2"; sha256="1wvkdb9zj2j8dpppnyins05rg877zbydqsl3qaan62wznkknxcac"; depends=[lattice survival]; }; mixR = derive2 { name="mixR"; version="0.1.1"; sha256="1xd3v5rk59380zh7r6l5blmcy4gib9xp44j5dcrk6ivs6fgycsxh"; depends=[ggplot2 Rcpp]; }; mixRasch = derive2 { name="mixRasch"; version="1.1"; sha256="1r067pv7b54y1bz8p496wxv4by96dxfi2n1c99gziqf5ramx3qzp"; depends=[]; }; mixRaschTools = derive2 { name="mixRaschTools"; version="1.1.1"; sha256="1giq6d97sg6f66sh0gw6x1f2ax4ys91kfnrlpdv37m7qakk5npyj"; depends=[]; }; - mixSPE = derive2 { name="mixSPE"; version="0.1.1"; sha256="103lr74wryrk7sakss9cn774fjwy5xqc4hrcr7ig6m0dzyx4gqzl"; depends=[mvtnorm]; }; + mixSPE = derive2 { name="mixSPE"; version="0.9.1"; sha256="18lxivrjhh7h0l9hj0x7r8qxv1dwsad2bkswg73n0a95zf6lgn87"; depends=[mvtnorm]; }; mixcat = derive2 { name="mixcat"; version="1.0-4"; sha256="19v6y981js18xz9q49slclkhcf6w53iar55ynjs0lvhn1y1b2517"; depends=[statmod]; }; mixchar = derive2 { name="mixchar"; version="0.1.0"; sha256="1az2gggwipkzg86pvn9w2csgfgrpdc88kca51f5qcw0zk4wx5hlx"; depends=[minpack_lm nloptr tmvtnorm zoo]; }; mixcure = derive2 { name="mixcure"; version="2.0"; sha256="0jjbamn53iqrrx658wk3cz43grsbn1275p81256h4lia35s7cww3"; depends=[boot flexsurv gam survey survival timereg]; }; mixdir = derive2 { name="mixdir"; version="0.3.0"; sha256="1vgxxzsrl660agk4cjw4q4gx28fv5mkzpjy4qanq5c9mqpcxbxkc"; depends=[extraDistr Rcpp]; }; mixdist = derive2 { name="mixdist"; version="0.5-5"; sha256="1wchhysd33xz395hq4wgd3zv1qc92pbiqxqd7g2v6m1pb0j8ma9g"; depends=[]; }; - mixedCCA = derive2 { name="mixedCCA"; version="1.4.3"; sha256="0gpnds4rngl02q709igz1nh2zsfw2rnjflanrh0850ncidjld1zq"; depends=[chebpol fMultivar irlba MASS Matrix mnormt pcaPP Rcpp RcppArmadillo]; }; + mixedCCA = derive2 { name="mixedCCA"; version="1.4.6"; sha256="177kd1cj1ziw1knxklgpz04wjrqazg4xia6q8jspnik6kra8crqa"; depends=[chebpol fMultivar irlba MASS Matrix mnormt pcaPP Rcpp RcppArmadillo]; }; + mixedClust = derive2 { name="mixedClust"; version="1.0.2"; sha256="10hysjsld58cv0xif01xw08r0alr8xsnbp931x59lb36yi9g6f0m"; depends=[fda Rcpp RcppArmadillo RcppProgress]; }; mixedMem = derive2 { name="mixedMem"; version="1.1.2"; sha256="1p0gplfcn663xp40dk0yg70qffn1fwa9gxv7bppflgm9wkn8g3l5"; depends=[BH gtools Rcpp RcppArmadillo]; }; mixedsde = derive2 { name="mixedsde"; version="5.0"; sha256="0ss1ng4nx91gxj85wxxfyh9ljxsj3ag6lsj1a5d2815p9jzl7dsv"; depends=[MASS moments plot3D sde]; }; mixexp = derive2 { name="mixexp"; version="1.2.5"; sha256="0nbf10xhrr51rb1b2apcj4p3ci8xbi7flgz500ar3mxh8h8l74sq"; depends=[daewr gdata lattice]; }; - mixggm = derive2 { name="mixggm"; version="1.0"; sha256="1wiiayld7rwp3mwz93zizrv0dzw02mqrzprc4z6c4jj25c8pypw5"; depends=[foreach GA mclust memoise network Rcpp RcppArmadillo]; }; mixl = derive2 { name="mixl"; version="1.2.3"; sha256="1wy88lxkxd7fhchfqbciccj3ag5sks0iwhlfpqk2ddqviibar3nd"; depends=[maxLik numDeriv randtoolbox Rcpp readr sandwich stringr]; }; mixlink = derive2 { name="mixlink"; version="0.1.5"; sha256="0ywgrcplhspc0x5fniw52xqz20y7j9mwgy4ky8lv3vii659mr52m"; depends=[mvtnorm numDeriv Rcpp RcppGSL]; }; - mixlm = derive2 { name="mixlm"; version="1.2.4"; sha256="0jwz918qnz1p71y82ayrgir9rpij8zk3jgmn63nq5xrlf0jbjcdd"; depends=[car leaps multcomp pls pracma]; }; - mixmeta = derive2 { name="mixmeta"; version="1.1.0"; sha256="08llrd7pj8grz2hhvsyjf8r0qw9534bg327ls27g2kzm475b5kny"; depends=[]; }; + mixlm = derive2 { name="mixlm"; version="1.2.5"; sha256="0k7sy2bkf6vsp5qkz33327p1kjyzn3cxmxzc6dmw6g29c4dyxkac"; depends=[car leaps multcomp pls pracma]; }; + mixmeta = derive2 { name="mixmeta"; version="1.1.1"; sha256="19hfsh6cmgklfyws992qm0vn31frwg2ivwp89lrx5kvhkbc4xicz"; depends=[]; }; mixor = derive2 { name="mixor"; version="1.0.4"; sha256="1l296z0a3kamb1m94pfx3vczp36pa0np101fy5c23kh45s59pbs7"; depends=[survival]; }; + mixpoissonreg = derive2 { name="mixpoissonreg"; version="1.0.0"; sha256="1pk45p96kwl3gvi5523vm824s1bb5aqpn9qqpqy8kjy2pd2a4k32"; depends=[dplyr Formula gamlss gamlss_dist generics ggplot2 ggrepel gridExtra lmtest magrittr pbapply Rfast rlang statmod tibble]; }; mixreg = derive2 { name="mixreg"; version="0.0-6"; sha256="04g863yxrlj0wqsmzzxph5110g3gjk094r59zzk0b9r89m8vhpsl"; depends=[]; }; mixsep = derive2 { name="mixsep"; version="0.2.1-2"; sha256="1ywwag02wbx3pkd7h0j9aab44bdmwsaaz0p2pcqn1fs3cpw35wa2"; depends=[MASS RODBC tcltk2]; }; mixsmsn = derive2 { name="mixsmsn"; version="1.1-8"; sha256="102lsr55bqfvv389wd07k3jqc5kpzvfmm5rpx23rb8rqw42wkffh"; depends=[mvtnorm]; }; @@ -11293,68 +11743,70 @@ in with self; { mixtNB = derive2 { name="mixtNB"; version="1.0"; sha256="0lqbm1yl54zfs0xcmf3f2vcg78rsqyzlgvpydhmhg7x6dkissb22"; depends=[]; }; mixtools = derive2 { name="mixtools"; version="1.2.0"; sha256="08whic8hmmzi55b7azwj11l2x5r9s5qbyrv7s9jr08156vqkw0zg"; depends=[kernlab MASS segmented survival]; }; mixtox = derive2 { name="mixtox"; version="1.3.2"; sha256="0mdnp1yrcxvan5l7jj91s41vq5y1kdnkhhinqrklmg4ph5f29dmq"; depends=[minpack_lm]; }; - mixture = derive2 { name="mixture"; version="1.5.1"; sha256="11b2a5kik70g9v4hx9v8j90crjfqhlxghgc12isnk79jh86v3myk"; depends=[]; }; + mixture = derive2 { name="mixture"; version="2.0.4"; sha256="1kmvz7n5gif64awmrzwj3bbfbvl099047gygsvbwfjwnwazq3fah"; depends=[BH lattice Rcpp RcppArmadillo RcppGSL]; }; mize = derive2 { name="mize"; version="0.2.4"; sha256="1dfhldxsm1il9avfxvaiir9r878dp7swyc9c8ilm6llx208sd5d5"; depends=[]; }; - mizer = derive2 { name="mizer"; version="2.0.4"; sha256="0wkysh21a2msi3z1vl9fbrnvvad3jqhjyc7jgb438vqcqdrsszr0"; depends=[assertthat deSolve dplyr ggplot2 plotly plyr progress Rcpp reshape2]; }; + mizer = derive2 { name="mizer"; version="2.1.0"; sha256="1ixpz3mifaiaadmsfp1wi7m3kmnya9324nnhzkji8vcq2y9jsccy"; depends=[assertthat deSolve dplyr ggplot2 lifecycle plotly plyr progress Rcpp reshape2]; }; mkde = derive2 { name="mkde"; version="0.1"; sha256="04v84arpnmjrkk88ffphnhkz32x7y0dypk75jfmbbgcgv59xlglv"; depends=[raster Rcpp sp]; }; - mkin = derive2 { name="mkin"; version="0.9.50.3"; sha256="0vycbky2gyqpyf6avk47l8lcmc8pfzjimd6iprh3lnl0j7p133lg"; depends=[deSolve inline lmtest nlme numDeriv pkgbuild purrr R6]; }; + mkin = derive2 { name="mkin"; version="1.0.4"; sha256="0jxgzaznzxs3vqhc5ax66gjkgw8zqvpd7j8mf0k6bmxyhwgb96xr"; depends=[deSolve inline lmtest nlme numDeriv pkgbuild purrr R6]; }; mknapsack = derive2 { name="mknapsack"; version="0.1.0"; sha256="1kzmx7d512681a4hjirfgcd7a8rvndb4da66p16gms5nnxzsby9c"; depends=[assertthat data_table lpSolve]; }; mkssd = derive2 { name="mkssd"; version="1.1"; sha256="1qqzy6fn6sc3lxahc19hzzf1hzxsyvxqi7npynw0vkknlrvh2ijp"; depends=[]; }; mlPhaser = derive2 { name="mlPhaser"; version="0.01"; sha256="1s2mqlnbcjdkx0ghvr2sw9rzggqa4jy2vzi9vbyqkh6795lgck6n"; depends=[]; }; mlVAR = derive2 { name="mlVAR"; version="0.4.4"; sha256="0ib566qygm28lqhr3w9vzfxnpsmazlipzrfsdm3cw21wpz2lvxcr"; depends=[abind arm clusterGeneration corpcor dplyr graphicalVAR lme4 MplusAutomation mvtnorm plyr qgraph]; }; mlapi = derive2 { name="mlapi"; version="0.1.0"; sha256="023vk5bp8cjcq88sapkl87kdxr92bay1dyxl6xirnyj699pyj51k"; depends=[Matrix R6]; }; - mlbench = derive2 { name="mlbench"; version="2.1-1"; sha256="1rp035qxfgh5ail92zjh9jh57dj0b8babw3wsg29v8ricpal30bl"; depends=[]; }; + mlbench = derive2 { name="mlbench"; version="2.1-3"; sha256="157iqsld0wj8g8cbs7nh6p2x6kasmkhs3078hsmqac946gk2pydi"; depends=[]; }; mlbstats = derive2 { name="mlbstats"; version="0.1.0"; sha256="1pfsc1pc5986gykx8l6afahszhaj4940l8g33fdxyy7194kbcz70"; depends=[]; }; mldr = derive2 { name="mldr"; version="0.4.3"; sha256="07lbxpydz78fya11bl3l1ckhbps3nx43ddh3z09ygg70jjbdhxwq"; depends=[circlize shiny XML]; }; mldr_datasets = derive2 { name="mldr.datasets"; version="0.4.2"; sha256="0zyfv8xy5yik0k3j0kf9r43xrvj528qzdb1v74sfi24vim6k6503"; depends=[]; }; mle_tools = derive2 { name="mle.tools"; version="1.0.0"; sha256="02yndj1if31zr9y805mq5km5n8jz4w9jz1bmaz9nnqsqimrnigrb"; depends=[]; }; - mleap = derive2 { name="mleap"; version="1.0.0"; sha256="1abdab96wgybfgfbcai657hrbkn3kprxqw3ww415vpg2xhi8p905"; depends=[digest fs jsonlite purrr rJava sparklyr tibble]; }; + mleap = derive2 { name="mleap"; version="1.1.0"; sha256="0s15srbnk8fs5vj12gdszpg6g563q17v42fng2rydkgi4q7m2vj6"; depends=[digest fs jsonlite purrr rJava sparklyr tibble]; }; mlearning = derive2 { name="mlearning"; version="1.0-0"; sha256="0r8xfaxw83s2r27b8x5qd0k4r5ayxpkafzn9b1a0jvsr87i6520r"; depends=[class e1071 ipred MASS nnet randomForest]; }; mlegp = derive2 { name="mlegp"; version="3.1.8"; sha256="1sbdk3pybzhv2jycl56s6m86pp3qbfh8q0kmhn153130b84dzhga"; depends=[]; }; mlergm = derive2 { name="mlergm"; version="0.7"; sha256="1z757h5n8npl57c0wvh8njqbn0qdbwlc4c4gi03wzrn94vklb9ql"; depends=[cowplot ergm GGally ggplot2 lpSolve Matrix network plyr reshape2 sna stringr]; }; mleur = derive2 { name="mleur"; version="1.0-6"; sha256="0mddphq3b6y2jaafaa9y41842kcaqdl3dh7j4pva55q2vcjcclj7"; depends=[fGarch lattice stabledist urca]; }; mlf = derive2 { name="mlf"; version="1.2.1"; sha256="09ihnibpknpp26hdlbxyr99yz7z0n8qpsjs5aq3zngng0yh3wdn9"; depends=[]; }; - mlflow = derive2 { name="mlflow"; version="1.12.1"; sha256="1pj27zpfhac7cf7hi313az1ygfpnhffc4424f8ncdfb721i57chr"; depends=[base64enc forge fs git2r glue httpuv httr ini jsonlite openssl processx purrr reticulate rlang swagger tibble withr xml2 yaml zeallot]; }; + mlflow = derive2 { name="mlflow"; version="1.16.0"; sha256="1yn1hrnfvjkcpl2d3zp465jrpzkdvnwvf3lmp0rjd4hmhapjlfgy"; depends=[base64enc forge fs git2r glue httpuv httr ini jsonlite openssl processx purrr reticulate rlang swagger tibble withr xml2 yaml zeallot]; }; mlgt = derive2 { name="mlgt"; version="0.16"; sha256="1nvdq6mvgr39ikkf73aggsb6pmbw132injj8fdkr8hgcmwm6lgd9"; depends=[seqinr]; }; mlica2 = derive2 { name="mlica2"; version="2.1"; sha256="0c3m1zd9x99n6lw12hfzmd59355z51xa8rhg1h7qwfn9p86r826f"; depends=[]; }; mlmRev = derive2 { name="mlmRev"; version="1.0-8"; sha256="0ln4nazhc1prnlmvhfzhx268vx3klb0xnz1nsiwh0pwyskskyzym"; depends=[lme4]; }; - mlma = derive2 { name="mlma"; version="6.0-0"; sha256="1hgfdlrk19ywdz36k55mmb8km185rnl96wykbb19gahgyp4bny1p"; depends=[abind car coxme gplots lme4 survival]; }; + mlma = derive2 { name="mlma"; version="6.0-1"; sha256="085ci7a745y7zd7hy4a0bc2xni2yqsixpzc00lsmjwz807yv6cdf"; depends=[abind car coxme gplots lme4 survival]; }; mlmc = derive2 { name="mlmc"; version="1.0.0"; sha256="01h7w0ajyg3bccynlpbi3yjpy089wczbfbajpg6yw5v4dppw7k7a"; depends=[ggplot2 Rcpp]; }; - mlmi = derive2 { name="mlmi"; version="1.0.0"; sha256="08sm836y40af3jd5gcl5pnyv1gqpx4ngkkw4xfp82h1j4yk47sy5"; depends=[cat gsl MASS Matrix mix norm]; }; + mlmi = derive2 { name="mlmi"; version="1.1.0"; sha256="09c4gxbi561ms30nhjjvmw94l1hzh6j64gp9cq4c5zf2f0fsgzyc"; depends=[cat gsl MASS Matrix mix nlme norm]; }; mlmm_gwas = derive2 { name="mlmm.gwas"; version="1.0.6"; sha256="14xp8k7sww1skyw5l2006gpaw2c6yrri5nmfx4yav4vqdlhcj2k1"; depends=[coxme Matrix multcomp multcompView sommer]; }; mlmmm = derive2 { name="mlmmm"; version="0.3-1.2"; sha256="1m5ziiqs3ll1xjm1yf7x4sdc910jypn3kjnbadf95xxkvqmfrsqq"; depends=[]; }; mlogit = derive2 { name="mlogit"; version="1.1-1"; sha256="0hyi6gi03n895iydrfr1ba2ifbsd6lyjyhkq62d95ghhniysjgkg"; depends=[dfidx Formula lmtest MASS Rdpack statmod zoo]; }; mlogitBMA = derive2 { name="mlogitBMA"; version="0.1-6"; sha256="1wl8ljh6rr1wx7dxmd1rq5wjbpz3426z8dpg7pkf1x9wr94a2q25"; depends=[abind BMA maxLik]; }; mlpack = derive2 { name="mlpack"; version="3.4.2.1"; sha256="0fqpajcmqn9rijzjg7qj0zd2lik4xmhp5dmhbm3mdc9ssdg0axbr"; depends=[BH Rcpp RcppArmadillo RcppEnsmallen]; }; - mlquantify = derive2 { name="mlquantify"; version="0.1.4"; sha256="1k2f8h3rcjrmk8y1zaxjh0kvcvcvqjjyn1m6mabsya2jiqhgcxmi"; depends=[caret randomForest]; }; - mlr = derive2 { name="mlr"; version="2.18.0"; sha256="1lzqqypzbl6sim0ds4igvf3qss2i41sa228cpd65ybnk1vlp9zn2"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival XML]; }; - mlr3 = derive2 { name="mlr3"; version="0.9.0"; sha256="0gg7rrzxwrnpg6sgm0aa6bmfwmqv3d3za0ghnqrnibg33p9ynpgb"; depends=[backports checkmate data_table digest future_apply lgr mlbench mlr3measures mlr3misc paradox R6 uuid]; }; - mlr3benchmark = derive2 { name="mlr3benchmark"; version="0.1.1"; sha256="05jwjf8l157kbhgyajzllbwjf7869gr4ncvzvqz834j5iymkwwx8"; depends=[checkmate data_table ggplot2 mlr3misc R6]; }; + mlquantify = derive2 { name="mlquantify"; version="0.1.5"; sha256="00fxsg5p1fv1x102gz4541swinbc3c592qlfp123hy25h4bgdarj"; depends=[caret randomForest]; }; + mlr = derive2 { name="mlr"; version="2.19.0"; sha256="04v1br59ykzhzaiybjyyknbrc7ai5nl5l106b7482r49afscjj8i"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival XML]; }; + mlr3 = derive2 { name="mlr3"; version="0.11.0"; sha256="0qh9vdac1als2123wf51bwa7spdqk33iydlawi5n5dpci892iahl"; depends=[backports checkmate data_table digest future_apply lgr mlbench mlr3measures mlr3misc palmerpenguins paradox parallelly R6 uuid]; }; + mlr3benchmark = derive2 { name="mlr3benchmark"; version="0.1.2"; sha256="05b3x43xnj9byg6f70br6i21jdxbwlc66qmjqrrllp6vsixzc4vp"; depends=[checkmate data_table ggplot2 mlr3misc R6]; }; mlr3cluster = derive2 { name="mlr3cluster"; version="0.1.1"; sha256="15jaydpsdwpz6mmqqilx9vzz7ycs8h6cyw18i2hz8ikhwwp9nsbi"; depends=[backports checkmate clue clusterCrit data_table mlr3 mlr3misc paradox R6]; }; - mlr3data = derive2 { name="mlr3data"; version="0.3.0"; sha256="0r62h0a1hlbgvm2y0dghh978n28b0ydj4az26hixmy5m7dv00b66"; depends=[]; }; - mlr3db = derive2 { name="mlr3db"; version="0.3.0"; sha256="15ksnln8lvrfbs9k3apvczsvlq727x7q4f7r6ajl0590w8ka2ms4"; depends=[backports checkmate data_table digest mlr3 mlr3misc R6]; }; - mlr3filters = derive2 { name="mlr3filters"; version="0.4.0"; sha256="05j35hlc2w4x3cv59qw35qcamp7smvki898nhhryiybwyyv4d464"; depends=[backports checkmate data_table mlr3 mlr3misc paradox R6]; }; - mlr3fselect = derive2 { name="mlr3fselect"; version="0.4.1"; sha256="15zxkfp95f6yjzcw4gvp0jbzc9fncrxbzj3g5i1ivr7c9wzhjmwq"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc mlr3pipelines paradox R6]; }; - mlr3hyperband = derive2 { name="mlr3hyperband"; version="0.1.1"; sha256="0h0mxfnibpc3ch7x0nqyirh994nmjs150mmmxdkmwiqzks9snc94"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc mlr3tuning paradox R6]; }; - mlr3learners = derive2 { name="mlr3learners"; version="0.4.3"; sha256="1wxlpzz3hpkn77n4ag1v868dmp140j1pmrhynsv5xfgk9fg0w7ri"; depends=[data_table mlr3 mlr3misc paradox R6]; }; - mlr3measures = derive2 { name="mlr3measures"; version="0.3.0"; sha256="106lfaxphz0kh96ddq14hic7wvxjqp871zdp9kkkfk1kwfg35abw"; depends=[checkmate PRROC]; }; - mlr3misc = derive2 { name="mlr3misc"; version="0.6.0"; sha256="1q63i2059bf7cf61kwm0dqnk5vd60i0j4flziswwdk07fjxqh8xr"; depends=[backports checkmate data_table R6]; }; - mlr3oml = derive2 { name="mlr3oml"; version="0.4.0"; sha256="1z5hn7a7sg7xs4d155rn3ikb7h9d6z0zj1j3c3kmnx7qp2mlcvgq"; depends=[backports checkmate curl data_table jsonlite lgr mlr3 mlr3misc R6 stringi]; }; - mlr3pipelines = derive2 { name="mlr3pipelines"; version="0.3.2"; sha256="1x738b312mcvb0dif88sv4nlh3y6i47q0wagc5ggyh1hnqjiz71y"; depends=[backports checkmate data_table digest lgr mlr3 mlr3misc paradox R6 withr]; }; - mlr3proba = derive2 { name="mlr3proba"; version="0.2.6"; sha256="1ig6vr8iq0cnx4jx9v7dnvzyr68cxw0vwf97g86m09psxda6pzss"; depends=[checkmate data_table distr6 mlr3 mlr3misc paradox R6 Rcpp survival]; }; + mlr3data = derive2 { name="mlr3data"; version="0.3.1"; sha256="109jdv9kdivpac2lbj18d1lr3x7yzii7rglg0w6ll9034ynwja3r"; depends=[]; }; + mlr3db = derive2 { name="mlr3db"; version="0.4.1"; sha256="0b1488iw4hismhirylf4qi9pn6qwh8125pxkd5fds5l50wc5m59l"; depends=[backports checkmate data_table digest mlr3 mlr3misc R6]; }; + mlr3filters = derive2 { name="mlr3filters"; version="0.4.1"; sha256="11mr6b7g3zg9r72wmq9n34s44lk7limciiqs5x2mmjdfql6jxlxi"; depends=[backports checkmate data_table mlr3 mlr3misc paradox R6]; }; + mlr3fselect = derive2 { name="mlr3fselect"; version="0.5.1"; sha256="0s10cx0naz39gxdqfii6wqw1qip6ln1dhbqjgwpkpm3bh6c2dqgf"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc mlr3pipelines paradox R6]; }; + mlr3hyperband = derive2 { name="mlr3hyperband"; version="0.1.2"; sha256="07xygxm8032rbsq9sa7gkms16fzx753q0b6dhxp71pmzm8bsvi06"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc mlr3tuning paradox R6]; }; + mlr3learners = derive2 { name="mlr3learners"; version="0.4.5"; sha256="02v4y32yn1m0akkqzhfg65ib21rgy9iz8db4kdcrvi949clkxnfk"; depends=[data_table mlr3 mlr3misc paradox R6]; }; + mlr3measures = derive2 { name="mlr3measures"; version="0.3.1"; sha256="18jk4kdj9771r16smz7xhmmiilcdg1qlavln5hrpvkx780zh3hj6"; depends=[checkmate PRROC]; }; + mlr3misc = derive2 { name="mlr3misc"; version="0.9.1"; sha256="0x1jsysw04a0y5arxl0vbv89s6bhffkwarbvgl1z2jjwz8xcd3jj"; depends=[backports checkmate data_table R6]; }; + mlr3oml = derive2 { name="mlr3oml"; version="0.4.3"; sha256="12sz23cnnhrmg00qvdqkwmgpl94841prj31gysxqf0r23779aijl"; depends=[backports checkmate curl data_table jsonlite lgr mlr3 mlr3misc R6 stringi]; }; + mlr3pipelines = derive2 { name="mlr3pipelines"; version="0.3.4"; sha256="1av3sijy2hk9vyxqp2sax1153zy9yz58d3m1gzc12ag5y01v252p"; depends=[backports checkmate data_table digest lgr mlr3 mlr3misc paradox R6 withr]; }; + mlr3proba = derive2 { name="mlr3proba"; version="0.4.0"; sha256="1sgmcbxy8xbsmywsbc8qn6qlr79fr244rfz6hvy6i6ipvb6m7rpf"; depends=[checkmate data_table distr6 mlr3 mlr3misc paradox R6 Rcpp survival]; }; mlr3shiny = derive2 { name="mlr3shiny"; version="0.1.1"; sha256="0jn5n6k1dq59g5m6pvpp964pcjv1mjbdbdz7dag7gs26g8c215jb"; depends=[data_table DT e1071 mlr3 mlr3learners mlr3measures plyr purrr ranger readxl shiny shinyalert shinydashboard shinyjs shinythemes shinyWidgets stringr]; }; - mlr3spatiotempcv = derive2 { name="mlr3spatiotempcv"; version="0.1.0"; sha256="0pj9ch76ljg4bsqsmd7gs1smldf38zv978vh8yiqljc3fbj8p40p"; depends=[checkmate data_table ggplot2 mlr3 mlr3misc paradox R6 testthat]; }; - mlr3tuning = derive2 { name="mlr3tuning"; version="0.5.0"; sha256="1pn80qjxzj2pivgs6qgairci6yh1bdnl2zbgl9ykdip2rqzv6r6m"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc paradox R6]; }; - mlr3verse = derive2 { name="mlr3verse"; version="0.1.3"; sha256="0hbzfcr1xwdyyf1jrxdrj4r1rzx15bj9s0pw5386zjwkvmdhp5c1"; depends=[mlr3 mlr3data mlr3filters mlr3learners mlr3misc mlr3pipelines mlr3tuning mlr3viz paradox]; }; - mlr3viz = derive2 { name="mlr3viz"; version="0.5.0"; sha256="15yqzqk0wrd3vxv2m6rbv74j65nsl6xf46axi6ldcwzb2f25v6ml"; depends=[checkmate data_table ggplot2 mlr3misc]; }; - mlrCPO = derive2 { name="mlrCPO"; version="0.3.7"; sha256="08gn57nvj6zvqqs4l686x8pc55dbp9i60shaq74y2br9diavaf9z"; depends=[backports BBmisc checkmate mlr ParamHelpers stringi]; }; + mlr3spatiotempcv = derive2 { name="mlr3spatiotempcv"; version="0.3.0"; sha256="03k1973s1b2049jw3ndifl0akc0lbw1vasc31n4sm9cp1f8br2pq"; depends=[checkmate data_table ggplot2 mlr3 mlr3misc paradox R6]; }; + mlr3tuning = derive2 { name="mlr3tuning"; version="0.8.0"; sha256="16rvsf0jf06yvalydbs7zzn2994hvvyfw975ydiyv3wy1qzgr8bv"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc paradox R6]; }; + mlr3verse = derive2 { name="mlr3verse"; version="0.2.1"; sha256="1z1dx0x72hbi7j4dkgfa0klpldnzynbfn30d5dkra5x2c7ldi0bl"; depends=[bbotk data_table mlr3 mlr3cluster mlr3data mlr3filters mlr3fselect mlr3learners mlr3misc mlr3pipelines mlr3proba mlr3tuning mlr3viz paradox]; }; + mlr3viz = derive2 { name="mlr3viz"; version="0.5.3"; sha256="08d3isdsa2zpjwm1ifnnf5c7zl55iri75r1a5k356aaqabzxmnm6"; depends=[checkmate data_table ggplot2 mlr3misc]; }; + mlrCPO = derive2 { name="mlrCPO"; version="0.3.7-2"; sha256="01n36nh9brb5kkgmxblmcz86gzrrjgg1bi0xmkyyx1qp57qx33p6"; depends=[backports BBmisc checkmate mlr ParamHelpers stringi]; }; mlrMBO = derive2 { name="mlrMBO"; version="1.1.5"; sha256="1f2ryd0mrlnnwxgwiria2sxqkb09kskfqjzsh32cbxh6ml4d3fbs"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; }; - mlsjunkgen = derive2 { name="mlsjunkgen"; version="0.1.1"; sha256="109ag52x4y3rzx8yccilrnl24mz4ximzx6v4lrbak7dpiclqrw7a"; depends=[]; }; - mlt = derive2 { name="mlt"; version="1.2-0"; sha256="0mjbnxkmv2pzwmwn249x21nfqb1v1ls3jah9a0vh6ndhz8c4gz7x"; depends=[alabama basefun BB coneproj nloptr numDeriv sandwich survival variables]; }; - mlt_docreg = derive2 { name="mlt.docreg"; version="1.0-9"; sha256="0jm6g4rk505ki3lasrrsq8lczb8wlyyd1phap3mqdh169rlacmah"; depends=[eha flexsurv lattice mlt multcomp np numDeriv survival truncreg]; }; + mlrintermbo = derive2 { name="mlrintermbo"; version="0.5.0"; sha256="1nyaqf6vkckdh7jb27iwv5dnvrh4bp0kkc5jzbqkyi8af11phg1l"; depends=[backports bbotk callr checkmate data_table lhs mlr3misc mlr3tuning paradox R6]; }; + mlsbm = derive2 { name="mlsbm"; version="0.99.2"; sha256="1p6fflhjbbyzx51hb77aak1kdabjrmzd7b47vdcanhb0vd263aby"; depends=[Rcpp RcppArmadillo]; }; + mlsjunkgen = derive2 { name="mlsjunkgen"; version="0.1.2"; sha256="1icsssgi5xf420ajagr9nw0wgbxpfm7dsd5b7s77vyh5hsfzm1z3"; depends=[]; }; + mlt = derive2 { name="mlt"; version="1.3-0"; sha256="00gmhhvjrciyla923a9ml7azw4figgc8dpjpbs698a6w7mr2a38l"; depends=[alabama basefun BB coneproj Matrix nloptr numDeriv sandwich survival variables]; }; + mlt_docreg = derive2 { name="mlt.docreg"; version="1.1-0"; sha256="0ad2m0hik6lrbr9jyqqng8rzh4xvpg46l7f3kq2qyx7dbllwhnd7"; depends=[eha flexsurv lattice mlt multcomp np numDeriv survival truncreg]; }; mltest = derive2 { name="mltest"; version="1.0.1"; sha256="14gyssfph088v936mpywmd4y8z9vdv0zk8638vlg23j8cf5j4al2"; depends=[]; }; mltools = derive2 { name="mltools"; version="0.3.5"; sha256="045v28w7vz1zjxim8vfc6ncvg2mavr1q332x0hzlqpfzrk7gz4vh"; depends=[data_table Matrix]; }; - mlxR = derive2 { name="mlxR"; version="4.1.3"; sha256="1ma4kw4db9iyylly8y7kkz4bv2qfmqyy9ychv4yhra6123n4001x"; depends=[ggplot2]; }; + mlxR = derive2 { name="mlxR"; version="4.2.0"; sha256="0pr564376q7pn0wbbw5q9mjfzdc0bpq1g4xj0bcdmb64binqllvb"; depends=[ggplot2]; }; mma = derive2 { name="mma"; version="10.5-0"; sha256="1n4p67s8vyaz3vj8f24lccg2mr4lmbqka6aj862bnzai9vljrjvq"; depends=[car gbm gplots lattice plotrix survival]; }; mmabig = derive2 { name="mmabig"; version="3.0-0"; sha256="032xphcrcwp9n3i8rcn4ipvvjmgh9qwmkdml40rx9fhg43qr31n1"; depends=[car glmnet gplots mma survival]; }; mmand = derive2 { name="mmand"; version="1.6.1"; sha256="19s6v083iry95akhc2ccj617sjcddalb6dp87j3lqjlgybxws62q"; depends=[Rcpp]; }; @@ -11376,41 +11828,42 @@ in with self; { mmr = derive2 { name="mmr"; version="0.1.0"; sha256="0by2v47b4kpjhfxzzl6kc1shw7g46nwnww4rq333r2cywvrbkk4w"; depends=[]; }; mmsample = derive2 { name="mmsample"; version="0.1"; sha256="0mdd2zryadd31a5pls5fvlxx52mr54jsi1i6mwrs4y7rl3i9v95z"; depends=[MASS Rcpp RcppArmadillo]; }; mmtsne = derive2 { name="mmtsne"; version="0.1.0"; sha256="1by0hrggla6idc1isnq072i1wfpw4x7id3hkg8l65gy8iycccd12"; depends=[]; }; - mnis = derive2 { name="mnis"; version="0.2.7"; sha256="1yhhgrhsk3ww93vd29ipw16bkn16w0b2i7d46cb5bb5xs4s7vivd"; depends=[dplyr httr jsonlite Rcpp stringi tibble]; }; + mnis = derive2 { name="mnis"; version="0.3.1"; sha256="03ss2sp4gjjxlfip95p2vcc0nz8q7khm3iiyh1362n2xb6yp78k0"; depends=[dplyr httr janitor jsonlite purrr Rcpp stringi tibble]; }; mniw = derive2 { name="mniw"; version="1.0"; sha256="1iamq6cq027ncakm4rfx2p1k2mcj7nk5vk57m8ndnbmmi2y9wwv9"; depends=[Rcpp RcppEigen]; }; mnj = derive2 { name="mnj"; version="1.0"; sha256="05rz6krcq56zqvvaz3myf1aki2z635g2zrqyl25n2da1cvyjwdzq"; depends=[rpart]; }; mnlfa = derive2 { name="mnlfa"; version="0.1-53"; sha256="1hw4m6zpb2322041aizam1l71zxz3i7siawid8npig8v9dhkaqrf"; depends=[CDM Rcpp RcppArmadillo]; }; mnlogit = derive2 { name="mnlogit"; version="1.2.6"; sha256="0dfwpkl8g7ap5xr48smiv8vdbamd2r1liy9nwpsn0kcsr9cj65n9"; depends=[Formula lmtest mlogit]; }; mnonr = derive2 { name="mnonr"; version="1.0.0"; sha256="143qkn3bx37a6r7kgmspqh55l2r8k9f93jgxr6qpg51w411k5ilb"; depends=[]; }; - mnormpow = derive2 { name="mnormpow"; version="0.1.1"; sha256="0z53vwhkhkkr6zrjhd3yr14mb02vh7lr63frf0ivajndxiap0s9v"; depends=[]; }; mnormt = derive2 { name="mnormt"; version="2.0.2"; sha256="0d7ka4l4fl1wi77r2r81dc91n6cbj2xrb3lsizz5y0ziscva0sjw"; depends=[tmvnsim]; }; - mnreadR = derive2 { name="mnreadR"; version="2.1.4"; sha256="11mfpf12pjpgvcih6q8l9fwspj2gy78fcirimzv7gn061nr4v7sg"; depends=[dplyr ggplot2 nlme tibble tidyr]; }; + mnreadR = derive2 { name="mnreadR"; version="2.1.5"; sha256="1lbgaszhfyzs66yhlwmj6zqmxjqqq05lcghz5r2fqnbg2waq0ys0"; depends=[dplyr ggplot2 nlme tibble tidyr]; }; mnt = derive2 { name="mnt"; version="1.3"; sha256="1wf2mq4zdhznv589j7snw0gpnfrlvq6lhfihi2n20qlwm3lb9naa"; depends=[MASS pracma]; }; - mob = derive2 { name="mob"; version="0.3"; sha256="1hy7sj1qs6x6y066c1dpzqhs78bwf9dj7miiihvmkp5m4bd1h4wm"; depends=[gbm Rborist]; }; + mob = derive2 { name="mob"; version="0.4.1"; sha256="06sfsxbj4l2g7ycr9ifjbvh84dhnbqy9jpsq57i7qjbmcl7kd34y"; depends=[gbm Rborist]; }; mobForest = derive2 { name="mobForest"; version="1.3.1"; sha256="1g5yfs70abl7pacprijlwdq3l72aqkbqs09z1pmw64wv4wa1vm25"; depends=[modeltools party sandwich strucchange zoo]; }; - mobr = derive2 { name="mobr"; version="2.0.0"; sha256="09an5xwqkk95xn4fd1jpx0808y411rk6w05ni1w9l0n1zj407a45"; depends=[dplyr egg geosphere ggplot2 pbapply plotrix purrr rlang scales tibble tidyr vctrs]; }; - mobsim = derive2 { name="mobsim"; version="0.1.0"; sha256="077hw1162giwc90y5dvj9052i5hxdf2ii29m9q8ky028375dsd0f"; depends=[Rcpp sads vegan]; }; + mobilityIndexR = derive2 { name="mobilityIndexR"; version="0.2.1"; sha256="0bs2wvbjcrfh82b483vz4lr16y2vaajz2fb1p5bw05qb78jqj9bd"; depends=[]; }; + mobirep = derive2 { name="mobirep"; version="0.2.3"; sha256="06f7vn3ndkadwp60qvvh3yikdx97r6fkqldn67l1506vdr60pxfm"; depends=[copBasic copula ggplot2 ks lattice SpatialExtremes texmex viridis zoo]; }; + mobr = derive2 { name="mobr"; version="2.0.2"; sha256="0dvsarxkjcjn3f40qkx5pdjpvq7hr6l5nvdz6adxlr1sdbadfcws"; depends=[dplyr egg geosphere ggplot2 pbapply plotrix purrr rlang scales tibble tidyr vctrs]; }; + mobsim = derive2 { name="mobsim"; version="0.2.0"; sha256="0an8j5kj0cs1bjz9kwzwc54hm0zaiz5rsaw78ihldw0mx5n175gn"; depends=[Rcpp sads vegan]; }; moc = derive2 { name="moc"; version="2.0"; sha256="0fgp8dg9qf7aw1qawmszlxs4bcccqmd87y4kkzdqggm807c2k5gh"; depends=[]; }; moc_gapbk = derive2 { name="moc.gapbk"; version="0.1.0"; sha256="0gg64srdb17dx712hilnlrii9i5vi9vjrk17acaynaz307akdw08"; depends=[amap doMPI doParallel doSNOW fields foreach matrixStats mco miscTools nsga2R plyr reshape2 Rmisc]; }; mockery = derive2 { name="mockery"; version="0.4.2"; sha256="16zayzi2qdmiy513hvlci9f4p8jwry24006yfzrgmrvf6sf293lq"; depends=[testthat]; }; mockr = derive2 { name="mockr"; version="0.1"; sha256="0340v6189ivlzzriwk7yhf3v2k651x05fd1xrqfxxjgwhysaqj6z"; depends=[lazyeval]; }; - mockthat = derive2 { name="mockthat"; version="0.2.4"; sha256="1x0zvg8i9ryaj5g4cjh87l4w0d2a8gvskrzp2y382xy0lpq353m5"; depends=[]; }; + mockthat = derive2 { name="mockthat"; version="0.2.6"; sha256="12srlafk3ykzhrw65s1qzw3l566j285hi28rzrcpbgyr12720raa"; depends=[]; }; mod = derive2 { name="mod"; version="0.1.3"; sha256="0z5a6ps2m0cbw0n9kn44767m5jnbf1dl077i2p40fipv8xali9fb"; depends=[]; }; mod09nrt = derive2 { name="mod09nrt"; version="0.14"; sha256="1wn1y33bj9r712l0f063j5gcl423anjzmvgfy0ddihcrbpz4l7a0"; depends=[]; }; modEvA = derive2 { name="modEvA"; version="2.0"; sha256="1vkg7x48k0xl1ngqwk6waggidva924j8mv7wfbzfcyj36yv8ggdw"; depends=[]; }; modMax = derive2 { name="modMax"; version="1.1"; sha256="1mx4623az7vzaqf530pklx7j92qwwq93pa2416lnr24jjcxgva2h"; depends=[gtools igraph]; }; modQR = derive2 { name="modQR"; version="0.1.2"; sha256="0x4405gaxpmmy6a0r8s7sxdi2lnc76f2i174h7xqlrwqy13xyfvv"; depends=[geometry lpSolve]; }; modTurPoint = derive2 { name="modTurPoint"; version="0.1.0"; sha256="1m24vsi80ln1r7sr40pipaaanyc60yfxmjzf8l7nfy3yvyr8zqpn"; depends=[]; }; - modchart = derive2 { name="modchart"; version="0.4"; sha256="035676v16nlzjky910w9x4dbad79dbmmyhr9rj58lbi27i9z4ll0"; depends=[collapsibleTree dplyr DT dygraphs highcharter jsonlite lazyeval leaflet lubridate networkD3 plotly RColorBrewer reshape2 rgdal rpivotTable shiny shinyBS shinydashboard shinydashboardPlus shinyWidgets sp sparkline sunburstR tidyr treemap xts]; }; + modchart = derive2 { name="modchart"; version="0.5"; sha256="1mn8zywqhxhvy0k6mn0jsn90g9yb6sxyv34syzzxrxs2kdzx5szg"; depends=[collapsibleTree dplyr DT dygraphs highcharter htmlwidgets jsonlite lazyeval leaflet magrittr networkD3 plotly RColorBrewer rgdal shiny shinyBS shinydashboard shinydashboardPlus sp sparkline sunburstR treemap]; }; modcmfitr = derive2 { name="modcmfitr"; version="0.1.0"; sha256="1d6fi7pc10w2a97h1prhkg5cvzmxjp11c5bwrz90zry0m8anwjyh"; depends=[gtools nloptr]; }; modeLLtest = derive2 { name="modeLLtest"; version="1.0.3"; sha256="0hf7y78yp3jb0af9df3df6n1z66y2iyhhmgyfz12c4iadly0v6x1"; depends=[coxrobust MASS quantreg Rcpp RcppArmadillo survival]; }; modeest = derive2 { name="modeest"; version="2.4.0"; sha256="087dw0013y4m7fcl06mxylh9lnp6acysl80d80r9srv4pw4r950s"; depends=[fBasics stable stabledist statip]; }; modehunt = derive2 { name="modehunt"; version="1.0.7"; sha256="0qz9kmf1qfs2dr7kzm9l7ac0h5rvi3b9j9896p991sk4bcalsl0b"; depends=[]; }; - model4you = derive2 { name="model4you"; version="0.9-6"; sha256="1bz01hnk8lh1vsa6wnhzfhpznz3znzyljz7xp28x638s01l2fw4y"; depends=[Formula ggplot2 gridExtra partykit sandwich survival]; }; + model4you = derive2 { name="model4you"; version="0.9-7"; sha256="0pni9v3nradvy8sp2m07903vc7z610xrh426lf19dxss12kgrfi8"; depends=[Formula ggplot2 gridExtra partykit sandwich survival]; }; modelDown = derive2 { name="modelDown"; version="1.1"; sha256="1l0aggkh0ykpqrp59bdz1cyl1ai397cw4hya80b7fm7s49imwczg"; depends=[archivist auditor breakDown DALEX devtools drifter DT ggplot2 kableExtra psych svglite whisker]; }; modelObj = derive2 { name="modelObj"; version="4.0"; sha256="1py2y80x37mmnl2y0pxdbhqkjrln6x210hg0g224d34lxk71m172"; depends=[]; }; - modelStudio = derive2 { name="modelStudio"; version="2.1.0"; sha256="0cvr09av1c4z2j1qdic49j6cygrfcdahppdfr7d2avxmhswx1mhk"; depends=[DALEX digest iBreakDown ingredients jsonlite progress r2d3]; }; - modelbased = derive2 { name="modelbased"; version="0.4.0"; sha256="1ihhg2xi94rzzvrlfzymf0q5hzxgd58s37jy7syqcv1yjrdpsawh"; depends=[bayestestR emmeans insight parameters]; }; + modelStudio = derive2 { name="modelStudio"; version="2.1.2"; sha256="1blyyb8xag64v8sr73lbffc5jcn2vq39war3zakirag4j8bh73sv"; depends=[DALEX digest iBreakDown ingredients jsonlite progress r2d3]; }; + modelbased = derive2 { name="modelbased"; version="0.6.0"; sha256="02l6q5j5q5p2fg6km8kcv2y5ab3sh2indbbkz9fp05x0v72n7qmj"; depends=[bayestestR emmeans insight parameters]; }; modelc = derive2 { name="modelc"; version="1.0.0.0"; sha256="0xz1zgv5yyvq0yfnhm1kvb4wvlyn4ccd0lkwji55vq8hndvjvk98"; depends=[]; }; modeldata = derive2 { name="modeldata"; version="0.1.0"; sha256="0lbvmicvhw560jn9qk5dywrl6mgj1rf7zh7p86lf97c6bmz0zp2r"; depends=[]; }; modeldb = derive2 { name="modeldb"; version="0.2.2"; sha256="14s8xh05qxv414xcnww1b3s0jqwnjb3l1dqf7q1qbw33ilwcmsfb"; depends=[dplyr ggplot2 progress purrr rlang tibble tidypredict]; }; @@ -11418,18 +11871,19 @@ in with self; { modelgrid = derive2 { name="modelgrid"; version="1.1.1.0"; sha256="1z6g0akczry7vldkk6anfq572zbsfzbd6qnyllgjpbxhy3rrrq0r"; depends=[caret dplyr ggplot2 lattice magrittr purrr]; }; modelplotr = derive2 { name="modelplotr"; version="1.1.0"; sha256="0i1ssfcyl97zaxc9khdngrmsq9ydrmgv2nd7c6kc6i9z93jbkk4k"; depends=[dplyr ggfittext ggplot2 gridExtra magrittr RColorBrewer rlang scales]; }; modelr = derive2 { name="modelr"; version="0.1.8"; sha256="1i31nff7bqibk6r4hhd4j1vzwbyaf8493v0bjaagn36njmysfnw2"; depends=[broom magrittr purrr rlang tibble tidyr tidyselect vctrs]; }; - modelsummary = derive2 { name="modelsummary"; version="0.6.4"; sha256="1m8ab6fnq400vrf1mw96ry9d0bg34z3495f4z6blykpr49a5d2ng"; depends=[broom checkmate generics glue insight kableExtra parameters performance tables]; }; - modeltests = derive2 { name="modeltests"; version="0.1.3"; sha256="1d5d53rp9aw426lhc10w6r60jmw6kdc66im6lmkps214pdy5crib"; depends=[dplyr generics purrr testthat tibble]; }; - modeltime = derive2 { name="modeltime"; version="0.4.0"; sha256="1wxx5vf3x2las1pyq0pbfifcv6zf0b5gv6z3a7j0bj9cg9pb8mgm"; depends=[cli dials dplyr forcats forecast ggplot2 glue gt hardhat janitor magrittr parsnip plotly progressr prophet purrr reactable rlang scales slider StanHeaders stringr tibble tidyr timetk workflows xgboost yardstick]; }; - modeltime_ensemble = derive2 { name="modeltime.ensemble"; version="0.3.0"; sha256="0masfnv1yi61aqlrgamwdrglgnqqd955fr4lpyjbrv9qvdiklm90"; depends=[cli crayon dials dplyr generics glmnet glue magrittr modeltime modeltime_resample parsnip progressr purrr recipes rlang rsample stringr tibble tictoc tidyr timetk tune workflows yardstick]; }; + modelsummary = derive2 { name="modelsummary"; version="0.7.0"; sha256="08rcwc9g5v1av6368ll7yd91acfh96fs0nnyk8hj0xj02440gcv4"; depends=[broom checkmate generics glue insight kableExtra parameters performance tables tidyr tidyselect]; }; + modeltests = derive2 { name="modeltests"; version="0.1.4"; sha256="0ii5sh8yz5yvf0gq41ia55dvbg8x9042x82j52ck6haxa0w8zpfy"; depends=[dplyr generics purrr testthat tibble]; }; + modeltime = derive2 { name="modeltime"; version="0.5.1"; sha256="10a80ai1ymsaxs1kfd33rrgmpgi61qdlrzl9vsq4mpb0bd154fiy"; depends=[cli dials dplyr forcats forecast ggplot2 glue gt hardhat janitor magrittr parsnip plotly progressr prophet purrr reactable rlang scales StanHeaders stringr tibble tidyr timetk workflows xgboost yardstick]; }; + modeltime_ensemble = derive2 { name="modeltime.ensemble"; version="0.4.0"; sha256="05ddbalx3mrl7gi3jcvzr47nwksb1ia79z5l9kgai8gcxj6im3y1"; depends=[cli crayon dials dplyr generics glmnet glue magrittr modeltime modeltime_resample parsnip progressr purrr recipes rlang rsample stringr tibble tictoc tidyr timetk tune workflows yardstick]; }; modeltime_gluonts = derive2 { name="modeltime.gluonts"; version="0.1.0"; sha256="1nivqpdyr2s6q70bixna0a18gbhrf1r20vm0gj8b51idjignwpp7"; depends=[dplyr forcats fs glue magrittr modeltime parsnip purrr reticulate rlang stringr tibble tidyr timetk]; }; - modeltime_resample = derive2 { name="modeltime.resample"; version="0.1.0"; sha256="0qj6s0a2q6627vjfrh8k9fb4xq8dylvdnc4zyqdgpplrgypjqf9k"; depends=[cli crayon dials dplyr forcats ggplot2 glue magrittr modeltime parsnip plotly progressr purrr recipes rlang rsample stringr tibble tictoc tidyr timetk tune workflows yardstick]; }; + modeltime_h2o = derive2 { name="modeltime.h2o"; version="0.1.1"; sha256="0rg7ha1zy0a1fbwrljsglfnfgkl747hjga8xajlzyrczhrmh4vnk"; depends=[dplyr fs glue h2o magrittr modeltime parsnip purrr rlang stringr tibble tidyr timetk]; }; + modeltime_resample = derive2 { name="modeltime.resample"; version="0.2.0"; sha256="1f58ydh8ilvbg92qv1q1bn0bd62cav5apjlzy38sjgwvb54kvi3i"; depends=[cli crayon dials dplyr forcats ggplot2 glue magrittr modeltime parsnip plotly progressr purrr recipes rlang rsample stringr tibble tictoc tidyr timetk tune workflows yardstick]; }; modeltools = derive2 { name="modeltools"; version="0.2-23"; sha256="1vqh69256h344sbj5affm0kmc77dakrxp6442xfdnfd0y5d8sgkb"; depends=[]; }; modelwordcloud = derive2 { name="modelwordcloud"; version="0.1"; sha256="0ardib0h923i7jk8bgcq6pn2zazx9acf9sdggifsk46hdz8hvqnm"; depends=[]; }; modernVA = derive2 { name="modernVA"; version="0.1.1"; sha256="1kjfgr7fcf0w27gx1wwapxcw5wisfv75mq9qc5hjnaivmsnkwsv3"; depends=[]; }; - moderndive = derive2 { name="moderndive"; version="0.5.0"; sha256="1dq2qqpa6k12s14nmgh6df6i9mkalw1515j7vxkgpbwdwd152ry4"; depends=[broom dplyr formula_tools ggplot2 glue infer janitor knitr magrittr rlang stringr tibble]; }; + moderndive = derive2 { name="moderndive"; version="0.5.1"; sha256="0507lx58jk43vn9cqk0jzk0h7n6akwpws49yy5rs67df0qpsszli"; depends=[broom dplyr formula_tools ggplot2 glue infer janitor knitr magrittr rlang stringr tibble]; }; modest = derive2 { name="modest"; version="0.3-1"; sha256="07rs014hdcabp2n0gg14pz2gmqgbw38vjv7a80vkzzh3601hxqws"; depends=[knitr rhandsontable shiny shinyBS]; }; - modesto = derive2 { name="modesto"; version="0.1.2"; sha256="0vmdj8wcy0vv9jaihxrj0m5sr7favz18ngfqc8pd8rd4ipcnxkjf"; depends=[markovchain]; }; + modesto = derive2 { name="modesto"; version="0.1.3"; sha256="1121zlbsp71rca7bqrhl2yshrz99iw48aldg506vcfcmym8hx7dy"; depends=[markovchain Rcpp]; }; modgetxl = derive2 { name="modgetxl"; version="0.4"; sha256="0j9fmhy3wra9qr8753a495ligfz5fwgydv3ixlfzx3sgbq882hic"; depends=[DT readxl shiny shinydashboard]; }; modi = derive2 { name="modi"; version="0.1.0"; sha256="0v78vzb22v2h2qlfhsyi0d2j3c2gj3wgv67p6gv74269kiaglf92"; depends=[MASS norm]; }; modifiedmk = derive2 { name="modifiedmk"; version="1.5.0"; sha256="171l3ls7icaanqf6jb64jabwq0mis2g1fswr0jfkpkrw5iw1c66q"; depends=[boot]; }; @@ -11437,11 +11891,13 @@ in with self; { modmarg = derive2 { name="modmarg"; version="0.9.6"; sha256="1l57sqhv1xm5g3z9rdlhkkq6gpbn7a3z8bk4dhvzm44xcfv8hi3i"; depends=[]; }; modopt_matlab = derive2 { name="modopt.matlab"; version="1.0-2"; sha256="0g5mswalv4y7p1k3n8a6qf7wb072m4bjq2ml2j83dz2j2bmvygsd"; depends=[ROI ROI_plugin_glpk ROI_plugin_quadprog]; }; moduleColor = derive2 { name="moduleColor"; version="1.08-3"; sha256="183l968l49b7jbmvsjjnmk1xd36cpjkp777c00gw1f73h6nb2na8"; depends=[dynamicTreeCut impute]; }; - modules = derive2 { name="modules"; version="0.8.0"; sha256="1xzlnnl4ka9h4qwq4gg65pzhacq9ip6v347yrhms14c86a851k8k"; depends=[]; }; + modules = derive2 { name="modules"; version="0.10.0"; sha256="067qxwyp71x42rj8c9y75jhqy61jg8f8l4cbjvzmla454c2d4z8p"; depends=[]; }; modygliani = derive2 { name="modygliani"; version="1.0"; sha256="01g96cdm4hgbsh6xsdfjg7vp7zb138sxwgv0msrlm27a6p4fcnlx"; depends=[]; }; + moexer = derive2 { name="moexer"; version="0.1.0"; sha256="0dk87g9141x03d0c0780458dh1icxd93ibqqrjz12wwdsa96hnxz"; depends=[assertthat cli dplyr glue httr jsonlite lubridate magrittr purrr readr rlang stringr tibble]; }; moezipfR = derive2 { name="moezipfR"; version="1.0.2"; sha256="0sfl1c7cvm1milcglcvz9lyvgricsdm7shx0jxyn50y7xz0padww"; depends=[tolerance VGAM]; }; mogavs = derive2 { name="mogavs"; version="1.1.0"; sha256="0lhmwdv991bv7j8k066jr7ii94w60ydjpf5pzmv8jlblf3w2pr02"; depends=[cvTools]; }; - mokken = derive2 { name="mokken"; version="3.0.4"; sha256="11j8zvb3l5fvp42kal4yn3rgm71r2jf9h8fr7aapbpd7j3j73pg0"; depends=[poLCA Rcpp]; }; + mojson = derive2 { name="mojson"; version="0.1"; sha256="077c92jhizpvg5gdwq1zb0d74m743l5qylj6df8hhgyvahswnhnq"; depends=[compareDF iterators magrittr RJSONIO stringr tidyr]; }; + mokken = derive2 { name="mokken"; version="3.0.6"; sha256="127wjfvwc1dbb4bpaxa3arqsc87nrhzwsr0ldrc57s4hf3ibmcbg"; depends=[poLCA Rcpp]; }; moko = derive2 { name="moko"; version="1.0.3"; sha256="1igrz0k9gfs4lmwh20bvmx8176d22g8gha7iv36mrpqgcynfdzh0"; depends=[DiceKriging emoa GenSA GPareto mco]; }; molaR = derive2 { name="molaR"; version="4.5"; sha256="1mfb05cfg0jh60yxnmwhja6m38185r58kbz2ak0ikgaqd9lls07s"; depends=[alphahull rgl Rvcg]; }; molic = derive2 { name="molic"; version="2.0.1"; sha256="0ling6rbccp0r3y3g8mlxd39hx8qgb3z1y82rjzsaamqwbzx7biz"; depends=[doParallel ess foreach ggplot2 ggridges Rcpp]; }; @@ -11449,42 +11905,48 @@ in with self; { momentchi2 = derive2 { name="momentchi2"; version="0.1.5"; sha256="1fv0jmwws4mkl9dsaybfpj29ncvqx2idsijgwz2qjblcg309a6k9"; depends=[]; }; momentfit = derive2 { name="momentfit"; version="0.2"; sha256="1xh3w3bwr2k4a79vma5cmz0l995nwbih0j7sgv3bjqdv4fn463d1"; depends=[sandwich]; }; moments = derive2 { name="moments"; version="0.14"; sha256="0f9y58w1hxcz4bqivirx25ywlmc80gbi6dfx5cnhkpdg1pk82fra"; depends=[]; }; - momentuHMM = derive2 { name="momentuHMM"; version="1.5.1"; sha256="01s0nv37w7nzg4jpm94sxi2m9kxlswcr00l1fm1y1c6x1asx4hpq"; depends=[argosfilter Brobdingnag car CircStats conicfit crawl data_tree doParallel doRNG dplyr extraDistr foreach geosphere ggmap ggplot2 lubridate magrittr MASS mitools moveHMM mvtnorm nleqslv numDeriv prodlim qdapRegex raster Rcpp RcppArmadillo rlang scatterplot3d sp survival]; }; + momentuHMM = derive2 { name="momentuHMM"; version="1.5.2"; sha256="1da7bva6zfr8c5bq00mrd41igza8kk4cksx84dap2lhkw6i7ipxy"; depends=[Brobdingnag car CircStats crawl data_tree doParallel doRNG extraDistr foreach geosphere MASS mitools mvtnorm nleqslv numDeriv prodlim qdapRegex Rcpp RcppArmadillo rlang sp survival]; }; momr = derive2 { name="momr"; version="1.1"; sha256="091vzaw8dm29q89lg2iys25rbg2aslgdn9sk06x038nngxdrn95r"; depends=[gplots Hmisc nortest]; }; - monaco = derive2 { name="monaco"; version="0.2.0"; sha256="0b49g5vn3g0i1c9h9yswnydp6lw4pl80q0c2mncca2n6rwr4wzxk"; depends=[htmltools htmlwidgets rstudioapi shiny]; }; - mondate = derive2 { name="mondate"; version="0.10.01.02"; sha256="18v15y7fkll47q6kg7xzmj5777bz0yw4c7qfiw2bjp0f3b11qrd2"; depends=[]; }; - mongolite = derive2 { name="mongolite"; version="2.2.1"; sha256="05qshdd9f5kpsas84khnawbin89k6xi54mayynqjgdy7xcy5wx8b"; depends=[jsonlite mime openssl]; }; + monaco = derive2 { name="monaco"; version="0.2.1"; sha256="1wwfwxv8064icdi6fhyrp3mrpv37x0cnnwdb5k1b88jfzb7j1hb6"; depends=[htmltools htmlwidgets rstudioapi shiny]; }; + mondate = derive2 { name="mondate"; version="0.10.02"; sha256="18nsqldj1vvv882nh2dyilqvz1jbhqkz3q69cpjq1xfcj0z88qxz"; depends=[]; }; + mongolite = derive2 { name="mongolite"; version="2.3.1"; sha256="0r7b5cxy5mjxsm9kqpaqqs8v0z9ysxhgbzy4y016hj9sn25ix60s"; depends=[jsonlite mime openssl]; }; + mongopipe = derive2 { name="mongopipe"; version="0.1.1"; sha256="081l6d1kwh30wq5kwz9dd2a9221x9139x1xbvfiqixwv0g9sjjy0"; depends=[jsonlite magrittr rlang]; }; monitoR = derive2 { name="monitoR"; version="1.0.7"; sha256="1h1g0m1j13mz37xxwck4s7a0bfqvi0nrzfw60j7bkzaah8zxcc9n"; depends=[tuneR]; }; monmlp = derive2 { name="monmlp"; version="1.1.5"; sha256="19cx60csm8mnf6ksg64vlhi8wi1c7bmv9l55y9zmaljblr0kmzxf"; depends=[optimx]; }; - monoClust = derive2 { name="monoClust"; version="1.2.0"; sha256="01gg2ppqy0pfdnl20lkkmiiz4k34r3nwr5zzcl3gq2vci887777l"; depends=[cluster doParallel dplyr foreach ggplot2 permute purrr rlang stringr tibble tidyr]; }; + monoClust = derive2 { name="monoClust"; version="1.2.1"; sha256="18zb4wfb09rpzzr9bc0nr71994nhgsk74s512dxlss50isvfqjqd"; depends=[cluster doParallel dplyr foreach ggplot2 permute purrr rlang stringr tibble tidyr]; }; monographaR = derive2 { name="monographaR"; version="1.2.1"; sha256="09fkcw13h7dx7j5vyp48fk6yzv9n64568zf2zvmm2c008jw3gkbm"; depends=[circular maptools png raster rmarkdown sp]; }; monomvn = derive2 { name="monomvn"; version="1.9-13"; sha256="1hm5qf28bh0q7f4zcjqx1qxw3l8hzkx349c1y3nwyfg7436vff6a"; depends=[lars MASS mvtnorm pls quadprog]; }; monoreg = derive2 { name="monoreg"; version="1.2"; sha256="16n622j1j998a5fhn1c1qbzk5bfa5h09d95ry89gsd00p40hqg0a"; depends=[]; }; + monotone = derive2 { name="monotone"; version="0.1.0"; sha256="1091xqa88gdp64b65610mfcknyz29kb980iqbvwnmlk12csszr1w"; depends=[]; }; monotonicity = derive2 { name="monotonicity"; version="1.3.1"; sha256="0bb6sl8yykry25a86qfggi36ggr1xrxcqsnzp6rb6na228hbwa2z"; depends=[lmtest MASS sandwich]; }; monreg = derive2 { name="monreg"; version="0.1.4"; sha256="15qgfhbd8ny05rjd1nn33ynh4i7m7wcy8az53jraghlk760bymwg"; depends=[]; }; - moonBook = derive2 { name="moonBook"; version="0.2.3"; sha256="0hys56mwbm776ff7dibi8wzyf69qiais9rs1jazv79lk6h56s9s6"; depends=[magrittr nortest purrr sjmisc stringr survival]; }; + moodleR = derive2 { name="moodleR"; version="0.3.2"; sha256="0c2p4p6payaq0r2mcw1kxhz5hg9aklbfny6j3ssjk0b05ngca5dv"; depends=[anytime cli config DBI dplyr ggplot2 ggwordcloud glue here lifecycle rlang RMariaDB RSQLite scales stringr tidytext]; }; + moonBook = derive2 { name="moonBook"; version="0.2.4"; sha256="0z78pzc8sr2g19xjdd9cmai4iqyifmh79gj8x40ddww6a27dalry"; depends=[magrittr nortest sjmisc stringr survival ztable]; }; + mopac = derive2 { name="mopac"; version="0.1.0"; sha256="07ljy6rwicyrv20l7zyxq2lb7qqfpl5mpv834m2n5c4air7sy23m"; depends=[]; }; mopsocd = derive2 { name="mopsocd"; version="0.5.1"; sha256="10hssnm1afqmxa9kw6ifqnz3p3yyjrmxgi98zlj31a5g4nis8wb1"; depends=[]; }; moreparty = derive2 { name="moreparty"; version="0.2.0"; sha256="0wds0223aqpflzmid9mdzszh1yrylqq68cqw5fj4yz0c1vwvfixh"; depends=[foreach ggplot2 iml MASS measures party partykit pdp plyr rlang varImp vip]; }; morgenstemning = derive2 { name="morgenstemning"; version="1.0"; sha256="17y90cf8ajmkfwla0hm4jgkbkd1mxnym63ph2468sfxkhn0r3v88"; depends=[]; }; morpheus = derive2 { name="morpheus"; version="1.0-1"; sha256="1zfx24ndlky0b6vg6an9vcjw955ms749dwb51x9gsj2m8vgrbpnn"; depends=[jointDiag MASS pracma]; }; morphomap = derive2 { name="morphomap"; version="1.3"; sha256="12jqrabx8vgkrfwcv4845jbf79ibg5iqzzzr4x4vybb4b2p2wd2i"; depends=[Arothron colorRamps DescTools geometry lattice mgcv Morpho oce raster rgdal rgl Rvcg sp]; }; - morse = derive2 { name="morse"; version="3.2.7"; sha256="1dqh5wjjdi0mskrig755dsfmcabd95zmck4d18g3ir07jq7w4zh8"; depends=[coda deSolve dplyr epitools ggplot2 gridExtra magrittr reshape2 rjags tibble tidyr zoo]; }; + morse = derive2 { name="morse"; version="3.3.1"; sha256="0p7a5p31i0lw0y84nk3ar2211rvlj5y96qq2lmmrrab17pcikg24"; depends=[coda deSolve dplyr epitools ggplot2 gridExtra magrittr reshape2 rjags tibble tidyr zoo]; }; mortAAR = derive2 { name="mortAAR"; version="1.1.0"; sha256="0xdiipxyfninknagn19xm1p4aqmwrz9c5zkxi49bbgrvv0742cfq"; depends=[crayon magrittr Rdpack reshape2 tibble]; }; - mosaic = derive2 { name="mosaic"; version="1.8.2"; sha256="08jrdi8y2xk5fjp2zdwfbj2cymd0m70kjjyyx57dsdgzppqajhcf"; depends=[broom dplyr ggdendro ggformula ggplot2 ggrepel ggridges ggstance glue gridExtra lattice latticeExtra leaflet MASS Matrix mosaicCore mosaicData readr rlang tidyr]; }; + mortyr = derive2 { name="mortyr"; version="0.0.2"; sha256="0flihmkzw8dypp2ijq22cd3rka6h8cd1qdyr4zrs9cv5335nddmk"; depends=[httr jsonlite tibble]; }; + mosaic = derive2 { name="mosaic"; version="1.8.3"; sha256="1y0isqbva0vi5zlx1xvixbq87n4xp66ljh43qnd0cpzaz0mn21cg"; depends=[broom dplyr ggdendro ggformula ggplot2 ggrepel ggridges ggstance glue gridExtra lattice latticeExtra leaflet MASS Matrix mosaicCore mosaicData readr rlang tidyr]; }; mosaic_find = derive2 { name="mosaic.find"; version="0.1.2"; sha256="1fzgksh8sp701qjfrvjl2bg967qjkjpilxsfkrazhw71cgmzjgjl"; depends=[minpack_lm]; }; mosaicCalc = derive2 { name="mosaicCalc"; version="0.5.1"; sha256="0w5j7q314hzfzaw24ych2dhn255lnn3w0x4xr47qc1zclbmbny91"; depends=[ggformula magrittr MASS mosaic mosaicCore rlang]; }; - mosaicCore = derive2 { name="mosaicCore"; version="0.8.0"; sha256="00va6x1i8d3wkm1bgsms9dsjfn5a1l43prpl9pqirgq3zm85hrqj"; depends=[dplyr MASS rlang tidyr]; }; - mosaicData = derive2 { name="mosaicData"; version="0.20.1"; sha256="05mrwvs7awhpv2gvk0jjva74gndfgh2cl17slxcjhwlpga8nmxji"; depends=[]; }; + mosaicCore = derive2 { name="mosaicCore"; version="0.9.0"; sha256="1h3ixzna4xy42rdnd89jj0v9q0riy3fnkd33z6l5c0zaidzm58fz"; depends=[dplyr MASS rlang tidyr]; }; + mosaicData = derive2 { name="mosaicData"; version="0.20.2"; sha256="0h3f5fgzkzjfgf3ml0qa5j52921y6wy6jgggxmhs31bs8fd4srg4"; depends=[]; }; mosaicModel = derive2 { name="mosaicModel"; version="0.3.0"; sha256="1gx4rzh0h922gyb50vz6q5vqqp5ry5hf2mq95948q2gcady91k5w"; depends=[caret dplyr ggformula ggplot2 knitr lazyeval MASS mosaicCore testthat tibble tidyr tidyverse]; }; mosmafs = derive2 { name="mosmafs"; version="0.1.2"; sha256="04syr5qr91hyv1m5hfrjsriq0qgidaln06m7f3jgc1qyrni930rw"; depends=[BBmisc checkmate ecr MASS mlr mlrCPO parallelMap ParamHelpers smoof]; }; mosqcontrol = derive2 { name="mosqcontrol"; version="0.1.0"; sha256="199rkfisagr4kfx358f8yrbls00fng0kq8siyrbfwwf8qrba9fla"; depends=[assertthat magrittr NlcOptim nloptr pracma sfsmisc]; }; - mosum = derive2 { name="mosum"; version="1.2.3"; sha256="1xrrx0gaby5gbqssvhwracm8wny31lqzd64hkmr81s41z8srkxx9"; depends=[plot3D RColorBrewer Rcpp]; }; + mosum = derive2 { name="mosum"; version="1.2.5"; sha256="1lhd6m5qs7119xbsbk5zkf74mdh2c5zsk6gvchkjn6kdj5d5lyqp"; depends=[plot3D RColorBrewer Rcpp]; }; + motif = derive2 { name="motif"; version="0.4.1"; sha256="17x9azn1q768p4fa8rlplf8g93zhmw8kc1l6ri18mix84q8kjym0"; depends=[comat philentropy Rcpp RcppArmadillo sf stars tibble]; }; motifcluster = derive2 { name="motifcluster"; version="0.1.1"; sha256="1a123djc476hf528h68f1l1sh47ljxh23hmp8j22fypiaci1a3av"; depends=[igraph LICORS Matrix RSpectra]; }; motifr = derive2 { name="motifr"; version="1.0.0"; sha256="01synariq39mzhx12jbcpwn982piakakl97sgs33xa8xrbwzcxgm"; depends=[dplyr ggplot2 ggraph igraph intergraph network purrr RColorBrewer reshape2 reticulate rlang scales tibble tidygraph]; }; motmot = derive2 { name="motmot"; version="2.1.3"; sha256="09qsyc4ifdl316kjqqkarmflpjcd0ivkhx5fzi3502anj6dxpjnq"; depends=[ape caper coda ks mvtnorm Rcpp]; }; motoRneuron = derive2 { name="motoRneuron"; version="1.0.0"; sha256="1hdsf4c1v5hfaqpi5y1v60zqq5fdmlqdvzpsq77diclp9vzdshja"; depends=[dygraphs ggplot2]; }; moult = derive2 { name="moult"; version="2.1.0"; sha256="0k0969fwy648x25xw42w5ncimyw2cbq305rzf4m77p3pf0k50m9b"; depends=[Formula Matrix]; }; - mountainplot = derive2 { name="mountainplot"; version="1.2"; sha256="1bbgkps1yhfa0lmapqkhhl5mc63p0gzszxw2g910dbi1cjc0pphx"; depends=[lattice]; }; + mountainplot = derive2 { name="mountainplot"; version="1.3"; sha256="1mgvcv58pb3ximrf7gq1ii53gmjrn1qajayjlx8qqzsvjkn3myin"; depends=[lattice]; }; mousetrack = derive2 { name="mousetrack"; version="1.0.0"; sha256="0lf0xh0c3xl27nh5w8wwyrm2jfzfajm2f73xjdgf746dp365qc8n"; depends=[pracma]; }; mousetrap = derive2 { name="mousetrap"; version="3.1.5"; sha256="0q89k4hb6lv65b71qivvahpblpcgnd5jmmq9z5m8jvp1ksp49vqz"; depends=[cstab diptest dplyr fastcluster fields ggplot2 magrittr pracma psych RColorBrewer Rcpp rlang scales tidyr]; }; movMF = derive2 { name="movMF"; version="0.2-5"; sha256="1k790g1h17vv4ails4jhdnqiwj3b2zpas13x8wzkabwf4k0n1g91"; depends=[clue skmeans slam]; }; @@ -11492,11 +11954,11 @@ in with self; { moveHMM = derive2 { name="moveHMM"; version="1.7"; sha256="031msh427hgjyr37imalr7smd79yqscw9xq5rjrixxc2w5qly9jj"; depends=[boot CircStats geosphere ggmap ggplot2 MASS numDeriv Rcpp RcppArmadillo sp]; }; moveVis = derive2 { name="moveVis"; version="0.10.5"; sha256="1lj22yr6v3vg795r72gkbhyabycppxbjsaldqiqgckhkdfh3lziw"; depends=[av cowplot curl ggplot2 gifski lubridate lwgeom magick magrittr move pbapply raster sf slippymath]; }; moveWindSpeed = derive2 { name="moveWindSpeed"; version="0.2.3"; sha256="14a2iymn4j831xlh42z5qxmhnh7xpp5bxasgpkhnb3v0b5ldyilh"; depends=[move Rcpp]; }; - movecost = derive2 { name="movecost"; version="0.5"; sha256="1rhmm2xk4f9kjanyaxpn0h6p7ka5pn7z6wlax6d6yhi9w9km75sp"; depends=[gdistance raster rgdal rgeos sp]; }; + movecost = derive2 { name="movecost"; version="0.7"; sha256="1w80r14ahkj5daj0pjv8ww8lzhngzxvv3xg839w7fv1q4paik6in"; depends=[elevatr gdistance raster rgdal rgeos sp]; }; mozzie = derive2 { name="mozzie"; version="0.1.0"; sha256="09dwrv4r0hi19gzi1vpif3q4wlbny9h22430g1hhv0wkqs86mhmw"; depends=[]; }; mp = derive2 { name="mp"; version="0.4.1"; sha256="0awvwqwb25q47j14b450k1k5mh2yzwhn7gizjv5j7lyiamk30iwq"; depends=[Rcpp RcppArmadillo]; }; mpa = derive2 { name="mpa"; version="0.7.3"; sha256="0mhnsbgr77fkn957zfiw8skyvgd084rja1y4wk5zf08q5xjs2zvn"; depends=[network]; }; - mpath = derive2 { name="mpath"; version="0.4-2.17"; sha256="0zs6551g8blzp3dj06k34vbp8gw5jv5h9hkys3n9mrc767nfs9sf"; depends=[bst doParallel foreach glmnet MASS numDeriv pamr pscl WeightSVM]; }; + mpath = derive2 { name="mpath"; version="0.4-2.19"; sha256="1zjs6d000w6j54vag8z2y0j5frxwk7cf6l3qcxbgbf0h96c943gs"; depends=[bst doParallel foreach glmnet MASS numDeriv pamr pscl WeightSVM]; }; mpbart = derive2 { name="mpbart"; version="0.2"; sha256="1145n0lxmm0kjm2lc358d79hqws48crj17pjvmchl1pbfd7zi4r8"; depends=[bayesm cvTools mlbench mlogit]; }; mpcmp = derive2 { name="mpcmp"; version="0.3.6"; sha256="1jzrmaxm133zy4wi5pzjlj6gnh89nx4j69dnwm4s4y3i7ixch908"; depends=[dplyr generics ggplot2 ggpubr purrr Rcpp rlang stringr tibble]; }; mpcv = derive2 { name="mpcv"; version="1.1"; sha256="0vwycspiw9saj811f6alkbijivy7szpahf35bxn2rpn2bdhbn21i"; depends=[lpSolve]; }; @@ -11508,7 +11970,6 @@ in with self; { mpoly = derive2 { name="mpoly"; version="1.1.1"; sha256="10is69ks22ka1cqw3xk0fvy4z3b2drm8lanqwj178qrzj7ipf7i0"; depends=[ggplot2 orthopolynom partitions plyr polynom stringi stringr tidyr]; }; mppR = derive2 { name="mppR"; version="1.2.1"; sha256="0q4pyfwypicmx8lqkgjkmagh6kyr6iww8xa64fxv0ayf8pcbzrca"; depends=[ggplot2 igraph qtl]; }; mppa = derive2 { name="mppa"; version="1.0"; sha256="06v6vq2nfh4b407x2gyvcp5wbdrcnk3m8y58akapi66lj8xplcx4"; depends=[]; }; - mpr = derive2 { name="mpr"; version="1.0.5"; sha256="132ahy05zrh2164bffiywgbarxvzkc30k79w7ph9ca8d9mpgj70b"; depends=[survival]; }; mpspline2 = derive2 { name="mpspline2"; version="0.1.3"; sha256="0yadvnfsj1c9mm28v6501510dhcg77nzcvky32zmhaa21gwszcij"; depends=[]; }; mpt = derive2 { name="mpt"; version="0.6-2"; sha256="19nkkpxd250xzk0il60psvhcikxfn9yqvfv9d21wilc9n2h79ad2"; depends=[]; }; mptools = derive2 { name="mptools"; version="1.0.1"; sha256="1g4fbfwxv9hir0jn22nh9854blgkh0b5jan3lv0888izj4isa1hc"; depends=[animation lattice latticeExtra raster rasterVis sp viridis zoo]; }; @@ -11517,8 +11978,8 @@ in with self; { mrMLM_GUI = derive2 { name="mrMLM.GUI"; version="4.0.2"; sha256="0ywxaw164czfgbnqfkh5zw06006clisbc780w2h4z71wfvj56dsi"; depends=[bigmemory coin data_table doParallel foreach lars mrMLM ncvreg Rcpp RcppEigen sampling sbl shiny shinyjs]; }; mra = derive2 { name="mra"; version="2.16.11"; sha256="0268msdy4cs2ifpagmwiabi6aav54ckn214ai18aqv2h97hmixw0"; depends=[]; }; mratios = derive2 { name="mratios"; version="1.4.2"; sha256="18pi0dks0qmw0gv76yqm4gvxdqrcvr25j1vb8k4mkp5p35kzkzff"; depends=[multcomp mvtnorm survival survPresmooth]; }; - mrbayes = derive2 { name="mrbayes"; version="0.2.0"; sha256="1g5p2w65kkvhcsxzx59zqlc1f26zajmcbprf2bznvcl200qbypg5"; depends=[BH Rcpp RcppEigen rstan rstantools StanHeaders]; }; - mrbin = derive2 { name="mrbin"; version="1.4.4"; sha256="1n793xhjvwkxm4jg0fr81laznbbhay6dhl3dcsi9h5nj8rax4bza"; depends=[]; }; + mrbayes = derive2 { name="mrbayes"; version="0.3.0"; sha256="17q0fr9za7xgb4a5fmbn4ljn9x7zv3kw3va3n6z3h31cak2irvf2"; depends=[BH plyr Rcpp RcppEigen rstan rstantools StanHeaders]; }; + mrbin = derive2 { name="mrbin"; version="1.5.2"; sha256="0qik1lxycc7i0q2yw5d6r6qarddshvzdyjyxfwn1k9hyvjzxd30c"; depends=[]; }; mrbsizeR = derive2 { name="mrbsizeR"; version="1.2.1.1"; sha256="0v06sd5sh7ghlr8lgrv6l4glmv7chj3951pw4ssxrly4hz2rh6i0"; depends=[fields maps Rcpp]; }; mrds = derive2 { name="mrds"; version="2.2.4"; sha256="0c432vi2b82078nzmwkchrazjaf6bjs4hgvndn03s2ja76sxnd1m"; depends=[mgcv numDeriv optimx Rsolnp]; }; mreg = derive2 { name="mreg"; version="1.1"; sha256="06la0yy2yys161jhlzlcm5lcv0664wm6sa8gjdnpd1s1nx52jkqf"; depends=[]; }; @@ -11528,7 +11989,7 @@ in with self; { mrfse = derive2 { name="mrfse"; version="0.2"; sha256="1dx21m54jsprlngj20q1bgvbw1bbm0sm8i01xanj68bx796ng14j"; depends=[]; }; mrgsim_parallel = derive2 { name="mrgsim.parallel"; version="0.1.1"; sha256="0xsq7538z8rw4b5q3bcrspgfjw965yr5v7f8k3za04ksx775nfy2"; depends=[dplyr future_apply mrgsolve]; }; mrgsim_sa = derive2 { name="mrgsim.sa"; version="0.1.0"; sha256="199m6ygwnw6fbld5fqsw1j5jz9x6l1ayrpsc0r51q4fr7nmmpfj2"; depends=[assertthat dplyr ggplot2 mrgsolve patchwork purrr rlang tibble tidyr tidyselect withr]; }; - mrgsolve = derive2 { name="mrgsolve"; version="0.10.7"; sha256="1b9yyqnwq7asbvmb19ddn0lhdglv1xcpxrgvmbdafzlngjx767n7"; depends=[BH dplyr glue lifecycle magrittr Rcpp RcppArmadillo rlang tibble tidyselect]; }; + mrgsolve = derive2 { name="mrgsolve"; version="0.11.0"; sha256="0pkbxal568249mh67rimrxrp2932zy7xznqablv1b0x2m2k95nw2"; depends=[BH dplyr glue lifecycle magrittr Rcpp RcppArmadillo rlang tibble tidyselect]; }; mri = derive2 { name="mri"; version="1.0.1"; sha256="1dssq556kid6c3djp0s6v853cranv2wjs2c9521l5ykg5g33hfmv"; depends=[]; }; mritc = derive2 { name="mritc"; version="0.5-2"; sha256="07b1b2k1ka43ikj2mhwnazw3ig7w10bf759fimxpksvk5k6wanx2"; depends=[lattice misc3d oro_nifti]; }; mro = derive2 { name="mro"; version="0.1.1"; sha256="00gc2hd8q5hb2xrswclcqqw1gxl83zmpma6bhsggg3kppsw1dpjv"; depends=[MASS matrixcalc]; }; @@ -11538,16 +11999,19 @@ in with self; { msSPChelpR = derive2 { name="msSPChelpR"; version="0.8.6"; sha256="0254riap3lxp929c7isj2665wvziiy2lskhhyzw50kyd768bvb60"; depends=[data_table dplyr lubridate magrittr progress purrr rlang sjlabelled stringr tidyr tidyselect tidytable]; }; msSurv = derive2 { name="msSurv"; version="1.2-2"; sha256="02qm3mq17d2yj5mbz6gapd3zfi1wmiad5hpyimcb39impk43n2hf"; depends=[class graph lattice]; }; msaFACE = derive2 { name="msaFACE"; version="0.1.0"; sha256="1lh8crz507nlddm946lmn73xbnsh4cs0kg238ysnsvxs726c83fs"; depends=[]; }; - msaR = derive2 { name="msaR"; version="0.3.0"; sha256="0lj9yhsissr4rgavyhgdxi2nrkq2088darzraisx9jsirjr49jf8"; depends=[ape htmlwidgets]; }; - msae = derive2 { name="msae"; version="0.1.2"; sha256="0xdyym4zmm9znr89qgy1sl7bw84nddn1jv3wh66igkxbczf542ih"; depends=[magic]; }; + msaR = derive2 { name="msaR"; version="0.5.0"; sha256="0f8kjpp6ma9iv2p904fan67fmf4v1zzc7a5r3krlsffyqqbwp9w4"; depends=[ape htmlwidgets]; }; + msae = derive2 { name="msae"; version="0.1.3"; sha256="11iwy0g1hiycya9rnri0m2np3cr50acr58h0mgnb3ikwyqdb9li9"; depends=[magic]; }; + msaeDB = derive2 { name="msaeDB"; version="0.2.1"; sha256="0ccvg41d28qjbknhsamw95nq8fdibmz03pwblddkqywfl5yarii3"; depends=[magic MASS]; }; + msaeRB = derive2 { name="msaeRB"; version="0.1.5"; sha256="0ssbnd9ix61dzkbf4lmjsi2jlzjw7lcvy9rx2s4ppy31x3fl9w2d"; depends=[abind magic MASS Matrix]; }; msaenet = derive2 { name="msaenet"; version="3.1"; sha256="067p97z54dwhxy0w4ihi8dddcbvglh8ssynbh29fl9jyxfwjr1ms"; depends=[foreach glmnet Matrix mvtnorm ncvreg survival]; }; msap = derive2 { name="msap"; version="1.1.8"; sha256="0z5lm782jjb9w1h5vgz8bmxjdcrq9zb3xp1w5cb479jjc7krlgg3"; depends=[ade4 ape]; }; msce = derive2 { name="msce"; version="1.0.1"; sha256="1x9ivc2bjp07pdn15p3qds00m1m00amcg2dfcdjsgbkx9x1kkfab"; depends=[Rcpp RcppParallel]; }; - mschart = derive2 { name="mschart"; version="0.2.5"; sha256="08j342slv4ca6qkd12hh7jmmv5wv6kfxamw34dr6sd89kzrfdj0p"; depends=[cellranger data_table htmltools officer R6 writexl xml2]; }; + mschart = derive2 { name="mschart"; version="0.3.0"; sha256="1mryxq21gl44kmn5qiyym43bv47fc6sjdm5pqkd80jfb6zpjym2b"; depends=[cellranger data_table htmltools officer writexl xml2]; }; + mscp = derive2 { name="mscp"; version="1.0"; sha256="18cy7nnvhpjl874bawsh8j1gry9wx134q6gk6j03s6546bzy8lgc"; depends=[]; }; mscstexta4r = derive2 { name="mscstexta4r"; version="0.1.2"; sha256="1hjcasmn33xav2mw085lcndv0432l6sz327aikf63491wj1sj7mw"; depends=[dplyr httr jsonlite pander stringi]; }; mscstts = derive2 { name="mscstts"; version="0.6.2"; sha256="0mf3hs150gz39s0lh2fqbpg632n7rmmb8ns5swgx2wi3svhrk5lm"; depends=[httr jsonlite tuneR]; }; mscsweblm4r = derive2 { name="mscsweblm4r"; version="0.1.2"; sha256="031s00wpr9zfjpii56m67q1phn05vqlhb8cfzhyf6fbrxvpb8k7n"; depends=[httr jsonlite pander]; }; - msd = derive2 { name="msd"; version="0.3.0"; sha256="0wk1llhl70hwgd900vfzj5a4w71ynca01vqlvv2yds5zy0bplalx"; depends=[]; }; + msd = derive2 { name="msd"; version="0.3.1"; sha256="0n3zg2mwbmazbkk41jv94v28glj38d7f08d3w3xrlnlr9gsqh4sd"; depends=[]; }; msda = derive2 { name="msda"; version="1.0.2"; sha256="05khpa5qasnngn6yvk87gv5262plqpw4knb6hzgy52w401k0y80r"; depends=[MASS Matrix]; }; msde = derive2 { name="msde"; version="1.0.4"; sha256="1jyvsadkha4976vdf8nn2dbrsymr4n932cqrkmhawmy6pxa2c45g"; depends=[Rcpp RcppArmadillo RcppProgress]; }; msgl = derive2 { name="msgl"; version="2.3.9"; sha256="0793d12cd1mcnr97byhfwpnvm329w78f56n7dcs4116hlizp8l9h"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; @@ -11560,7 +12024,7 @@ in with self; { msm = derive2 { name="msm"; version="1.6.8"; sha256="1d32y8f0vb2dfv3999liigpns788j145nrvd1xpxb9i2lsg8mwgk"; depends=[expm mvtnorm survival]; }; msma = derive2 { name="msma"; version="2.1"; sha256="1k1xfbwyapwjs7bp9v0vrdfrz54hsyxh562xni1n8m61l4gwkvzx"; depends=[mvtnorm]; }; msme = derive2 { name="msme"; version="0.5.3"; sha256="0mq57zdas1s87nblnvbif9lisgahfhvmabglvp9imr1mvpwybpbh"; depends=[lattice MASS]; }; - msmtools = derive2 { name="msmtools"; version="1.3"; sha256="0p7xpj78cjc1s015ma7vc38kqiy6wvpyixrdinx4ngig1pqfrq4p"; depends=[data_table msm survival]; }; + msmtools = derive2 { name="msmtools"; version="2.0.1"; sha256="09an9bpr0gnqbglb8kj4x8bb7f5dm2lc3d01wx6dh7j1d99vrrdk"; depends=[data_table ggplot2 msm patchwork scales survival]; }; msos = derive2 { name="msos"; version="1.2.0"; sha256="1fg9q6269cckn4g6isv22k22mzglxhjxjg5npqsikmisribmr9kb"; depends=[mclust tree]; }; mssm = derive2 { name="mssm"; version="0.1.4"; sha256="10qv0dylh1q1jlk6j28bsp819h0pjzvaynhrbsnl0d0yha657yrp"; depends=[nloptr Rcpp RcppArmadillo testthat]; }; mssqlR = derive2 { name="mssqlR"; version="1.0.0"; sha256="0qdnm7cx9cg14vfcnkmcjqr1jpxsw8xlrbnxldvzz44mzv2n878l"; depends=[magrittr RODBC]; }; @@ -11584,19 +12048,19 @@ in with self; { mudens = derive2 { name="mudens"; version="1.3.2"; sha256="18kv8xfmmmk0dyw64lwrlrks0gana0s7gaff6nxs59ndgb1pj6yp"; depends=[Rcpp survival]; }; mudfold = derive2 { name="mudfold"; version="1.1.2"; sha256="1g66axwrrvlsb03yhwa16pvxbl2wvpm7fzzl6nlw0cxlh99w7r33"; depends=[boot broom dplyr ggplot2 glmnet mgcv reshape2 zoo]; }; mueRelativeRisk = derive2 { name="mueRelativeRisk"; version="0.1.1"; sha256="16yclfmgxc32pv00vyb9fjdh4syax8ynizr8a29haiq22q5fqclh"; depends=[]; }; - muhaz = derive2 { name="muhaz"; version="1.2.6.1"; sha256="08qh43zx6h3yby44q2vxphfvmfdmqxpgyp0734yn341sy9n8pkkk"; depends=[survival]; }; + muhaz = derive2 { name="muhaz"; version="1.2.6.4"; sha256="1ddy8ayr4rdhzcipdvxdwd7z5g9hfp0ppacl7xf6f2612cn1185g"; depends=[survival]; }; muir = derive2 { name="muir"; version="0.1.0"; sha256="0h3qaqf549v40ms7c851sspaxzidmdpcj89ycdmfp94b2q3bmz98"; depends=[DiagrammeR dplyr stringr]; }; - mully = derive2 { name="mully"; version="2.1.30"; sha256="0ifi4i4y8rgn1mfzaggibq9wkaf8xl3qk6l5sgjxxfcymmq4vzf0"; depends=[igraph randomcoloR rgl shape]; }; + mully = derive2 { name="mully"; version="2.1.31"; sha256="0xpwb6zlzrwlqf26fd3phh885yk5vdaqg2k77zq0fq60mdn63r5v"; depends=[igraph randomcoloR rgl shape]; }; mulset = derive2 { name="mulset"; version="1.0.0"; sha256="0pigiy6hfiqh6x4zx6zqn3ykk36s3abzzyb67jdlf4jzc5zhrl9g"; depends=[digest gtools]; }; multDM = derive2 { name="multDM"; version="1.1.3"; sha256="16bvr62lxmrq79z856iigwz5cjhk327x4hhd0cg3adgabqcz04yp"; depends=[MTS]; }; multbxxc = derive2 { name="multbxxc"; version="1.0.1"; sha256="1ip5awjc2ljpy6nsr4y42x0yg4n7lyaxp9kzfjvwp41k9lriz4gm"; depends=[Rcpp RcppArmadillo rmumps]; }; - multcomp = derive2 { name="multcomp"; version="1.4-15"; sha256="1klvn4a1rlrzwhy1cjrkbbh6jspgzbrdm0jxsb1lmf1yzdz609wr"; depends=[codetools mvtnorm sandwich survival TH_data]; }; + multcomp = derive2 { name="multcomp"; version="1.4-17"; sha256="02zv739mbmx672yrqqx8am229h7ps476wphig7jrrbfgay29sl21"; depends=[codetools mvtnorm sandwich survival TH_data]; }; multcompView = derive2 { name="multcompView"; version="0.1-8"; sha256="1rfq9wvvrghq0542ff40wy8vdmsyd8spzz6ihcywcvxdfa8m6g8j"; depends=[]; }; multdyn = derive2 { name="multdyn"; version="1.6"; sha256="06yab2lmxp7lc7zjk8n194mn5vza0yjbp276iair3ry35my4h3v8"; depends=[data_table ggplot2 Rcpp RcppArmadillo reshape2]; }; multfisher = derive2 { name="multfisher"; version="1.1"; sha256="0vzvq7v2xz35fx8pg25c9xqkic09k6fcg9zh81j7pgqmzi2wwrp8"; depends=[]; }; multgee = derive2 { name="multgee"; version="1.7.0"; sha256="0f7lwla0i0why8lk4fsyxsc1qhyq4asqvy5pr04mqfxxr8x3nm5v"; depends=[gnm VGAM]; }; - multiApply = derive2 { name="multiApply"; version="2.1.1"; sha256="1vsknqzwkimmb9axa72slzpzij4mvkcy3578i7xjx3grfa6kbnlh"; depends=[doParallel foreach plyr]; }; - multiAssetOptions = derive2 { name="multiAssetOptions"; version="0.1-1"; sha256="1kb4qxyl9shvrpqfxq26lhh3sssmyjcnhhcl6gcbb0s86snh9ms9"; depends=[Matrix]; }; + multiApply = derive2 { name="multiApply"; version="2.1.3"; sha256="0ymxf5y48ki9v75bn8v3gs3fndmb41sl2f2xif9ah9962g64x0p7"; depends=[doParallel foreach plyr]; }; + multiAssetOptions = derive2 { name="multiAssetOptions"; version="0.1-2"; sha256="0ci17bjl7k2id7grlynisvjfmmgrmq5f5lf8kh5xbq70gmvxh7v9"; depends=[Matrix]; }; multiCA = derive2 { name="multiCA"; version="1.1"; sha256="1vgb13cfq10g8hxykgi3is3mrlbm76vh40cznapl7xxmw226ccrl"; depends=[bitops multcomp]; }; multiColl = derive2 { name="multiColl"; version="1.0"; sha256="01csf5gjk2wrv6d0m1j23gk6dcixck318ywfq1a1a0j1dl9wmvx4"; depends=[]; }; multiDimBio = derive2 { name="multiDimBio"; version="1.2.2"; sha256="0xadpvnyghpqh2q1gp1fqwv591sm3icmx60x4g8gn1vybi51k5rx"; depends=[ggplot2 gridGraphics lme4 MASS misc3d pcaMethods RColorBrewer]; }; @@ -11606,14 +12070,17 @@ in with self; { multiROC = derive2 { name="multiROC"; version="1.1.1"; sha256="15ydbxpkdyvsc55di13jvwh9p6dzxc1yj93w1cwsd8jp2y10wsd3"; depends=[boot magrittr zoo]; }; multiband = derive2 { name="multiband"; version="0.1.0"; sha256="1f4gmy0yf9zid7kl05zncvvig6hs4nl1h9wkrkc24rxx9risw9k9"; depends=[]; }; multibiplotGUI = derive2 { name="multibiplotGUI"; version="1.0"; sha256="0ig7r4p8mq594cjwclbqwjk8saqkvjqjbbnnxj1hc1sdj7qdlcpf"; depends=[cluster dendroextras Matrix rgl shapes tcltk2 tkrplot]; }; - multicastR = derive2 { name="multicastR"; version="1.3.0"; sha256="07y3a7apk6pjnfqki52jc5vbzb1w53fla7wcpc184f4zpqfc783q"; depends=[curl data_table gsubfn stringi XML xml2 xtable]; }; + multibridge = derive2 { name="multibridge"; version="1.1.0"; sha256="17xcngn6q2wgaxcspfigcvzp6zh2bq8vhmfb3gn9ryq1rf2fchfv"; depends=[Brobdingnag coda magrittr mvtnorm progress purrr Rcpp Rdpack stringr]; }; + multicastR = derive2 { name="multicastR"; version="2.0.0"; sha256="0zxv3kxk8gh2fgllzzg7k625n3p4q5pr465ja0mhvs48m4n262l9"; depends=[]; }; multichull = derive2 { name="multichull"; version="1.0.0"; sha256="1gc7kxxlbanc6rmmbf6h85jf7kj0a78h23m5vwwqqliv018qsv2n"; depends=[igraph plotly shiny shinythemes]; }; - multiclassPairs = derive2 { name="multiclassPairs"; version="0.4.0"; sha256="0s1c0bkzrg8viv152ylqjighbqbrpcwsg51w7l9gn7mjjdshavny"; depends=[Boruta caret dunn_test e1071 ranger rdist]; }; + multiclassPairs = derive2 { name="multiclassPairs"; version="0.4.2"; sha256="1y9lh3am774nzhcwd74jwrfj95hhqzw2y610cwcq6cjxcz36rjrx"; depends=[Boruta caret dunn_test e1071 ranger rdist]; }; multicmp = derive2 { name="multicmp"; version="1.1"; sha256="0mz7ksc5h6dy95l3kbsamm191372blhlrj573krc57bj93lmp1a5"; depends=[numDeriv]; }; multicolor = derive2 { name="multicolor"; version="0.1.4"; sha256="1yswpqm62cvpfj6zxrprbvamjah3zxhsvn19qgpqmha0098lx5g2"; depends=[cowsay crayon dplyr glue magrittr purrr stringi stringr tibble tidyr]; }; multicon = derive2 { name="multicon"; version="1.6"; sha256="16glkgnm4vlpxkhf1xw1gl1q10yavx9479i21v29lldag35z8pqx"; depends=[abind foreach mvtnorm psych sciplot]; }; multicool = derive2 { name="multicool"; version="0.1-11"; sha256="0xk408qbz9cxwf51j3pmy55gcjcnws8mc6j3vyn9zhramxj7x40w"; depends=[Rcpp]; }; multicross = derive2 { name="multicross"; version="2.1.0"; sha256="17hk03wsms9ij6hp6dw77cvvngdb5i66is6pcl1q21pyp327zqi6"; depends=[crossmatch MASS Matrix nbpMatching]; }; + multidplyr = derive2 { name="multidplyr"; version="0.1.0"; sha256="1a0ird0v7i09wd734i6cs31p14ixhrnv282br2k2q5akkpcxgfny"; depends=[callr crayon dplyr magrittr qs R6 rlang tibble vctrs]; }; + multifear = derive2 { name="multifear"; version="0.1.1"; sha256="1986f2qbl5m2kb1g8fr0r9dswm8k2p3zj40l6chlym7qjdjwm73z"; depends=[BayesFactor bayestestR bootstrap broom dplyr effectsize effsize esc ez forestplot ggplot2 nlme purrr reshape2 stringr tibble]; }; multifluo = derive2 { name="multifluo"; version="1.1"; sha256="1hnh1gj6lfnh2fn0v064bszydgsr6p9f7p8yxyw5rdxfrxymiw09"; depends=[agricolae ellipse imager]; }; multifwf = derive2 { name="multifwf"; version="0.2.2"; sha256="1l6z3pzz6g6w1spp1f918jh6w0jm93qyc882rj8jhn1198d2s8nd"; depends=[]; }; multigraph = derive2 { name="multigraph"; version="0.93"; sha256="1966c38y7a7ik1a0sn3vcprckjphz7xvd6hkq3nhf4xdarbnwrxv"; depends=[multiplex]; }; @@ -11624,11 +12091,11 @@ in with self; { multilevelTools = derive2 { name="multilevelTools"; version="0.1.1"; sha256="01fzx7j0mkb4fr7axv34184w6w5nfsdcr51nscci1mi5b2805x1s"; depends=[cowplot data_table extraoperators ggplot2 JWileymisc lavaan lme4 lmerTest nlme zoo]; }; multilinguer = derive2 { name="multilinguer"; version="0.0.4"; sha256="0kavgvbzv8bvv9qlr92j8mx7b802w513mqalrdyln0pw36c9i13x"; depends=[askpass fs rstudioapi rvest sys usethis xml2 zip]; }; multimark = derive2 { name="multimark"; version="2.1.2"; sha256="15qdj3h5j30i56yx089pq8iii5kkk3ay6xr6z2msk22zj1rv7ahh"; depends=[Brobdingnag coda Matrix mvtnorm prodlim raster RMark sp statmod]; }; - multimode = derive2 { name="multimode"; version="1.4"; sha256="142k2jbi6y9aaqz9cwl4wk2m1y1n1fgvk873nk3psdv2h6r77slx"; depends=[diptest ks rootSolve]; }; + multimode = derive2 { name="multimode"; version="1.5"; sha256="0qxb67qss2pmid0wiwblqng5qmihqchdhbkyjklgj20pvbjz1wjm"; depends=[diptest ks rootSolve]; }; multinbmod = derive2 { name="multinbmod"; version="1.0"; sha256="1c4jyzlcjkqdafj9b6hrqp6zs33q6qnp3wb3d7ldlij7ns9fhg71"; depends=[]; }; - multinet = derive2 { name="multinet"; version="3.3.1"; sha256="0sbzaadcln3ml4lsdd2ry0il6cppaxz48q5vj8g41rns2ifjspna"; depends=[igraph RColorBrewer Rcpp]; }; + multinet = derive2 { name="multinet"; version="3.3.2"; sha256="1nq12avlvfglpm1238nhwcixd9bvb0a87842ksq2bdm6jgmikv6j"; depends=[igraph RColorBrewer Rcpp]; }; multinets = derive2 { name="multinets"; version="0.2.2"; sha256="1i5jsq1xy0g0l5d1z3hz4gj6inj4rhd6lf2s5xzd5k8ccp5aba8c"; depends=[igraph Rcpp]; }; - multinma = derive2 { name="multinma"; version="0.2.0"; sha256="0lnhbgcb5dn0h6vjbkg86cklq5k1nfwc71fp0azm7vmkzgiqya1i"; depends=[bayesplot BH copula dplyr forcats ggdist ggplot2 ggraph glue igraph Matrix purrr randtoolbox Rcpp RcppEigen RcppParallel Rdpack rlang rstan rstantools StanHeaders stringr tibble tidyr truncdist]; }; + multinma = derive2 { name="multinma"; version="0.3.0"; sha256="0841p1lg54cbyxca89y0rw6542bjrxhlvcjkp77vswcjsnx5ay4a"; depends=[bayesplot BH copula dplyr forcats ggdist ggplot2 ggraph glue igraph Matrix purrr randtoolbox Rcpp RcppEigen RcppParallel Rdpack rlang rstan rstantools StanHeaders stringr tibble tidyr truncdist]; }; multinomRob = derive2 { name="multinomRob"; version="1.8-6.1"; sha256="1fdjfk77a79fy7jczhpd2jlbyj6dyscl1w95g64jwxiq4hsix9s6"; depends=[MASS mvtnorm rgenoud]; }; multinomineq = derive2 { name="multinomineq"; version="0.2.1"; sha256="09h5nccfcrnl78rdxwsw5cqirfq40a6x4dmpkibc475z3xndk2rm"; depends=[coda quadprog Rcpp RcppArmadillo RcppProgress RcppXPtrUtils Rglpk]; }; multipanelfigure = derive2 { name="multipanelfigure"; version="2.1.2"; sha256="0cm5bd7k0fx6d3gybcll6vvh14byanyk6dj4civqij7psa48iagc"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types ggplot2 gridGraphics gtable magick magrittr stringi]; }; @@ -11636,6 +12103,7 @@ in with self; { multiplex = derive2 { name="multiplex"; version="2.9.4"; sha256="0c1gpmh1jric8zzip5m3fr8wjxiqa7jhfklgdni22shlccnjxn33"; depends=[]; }; multipol = derive2 { name="multipol"; version="1.0-7"; sha256="1rkrg3kayxa05jayg8bk1mm3hcvi76570wqfja5953hd9j4krgha"; depends=[abind]; }; multirich = derive2 { name="multirich"; version="2.1.1"; sha256="04jr5jvds70j2psyxz12d2my61jcj5hvdyv10pvar2rpqaw0yxyh"; depends=[]; }; + multiridge = derive2 { name="multiridge"; version="1.7"; sha256="09l769i980xcrln3gwmlsx5zr7fy7iawwgjzv5vmamsgg73ijwfz"; depends=[mgcv pROC risksetROC snowfall survival]; }; multiselect = derive2 { name="multiselect"; version="0.1.0"; sha256="1cda38zq7c1r56wdfpr5dg0jfw4kzi9p7jq59qm04j461j9ag3q6"; depends=[Hmisc]; }; multisensi = derive2 { name="multisensi"; version="2.1-1"; sha256="0f8i1jvrnmdsws5w7fz9k5pb5yfl5b9hnfd8aq4zj1r6m90kb6sz"; depends=[knitr sensitivity]; }; multisom = derive2 { name="multisom"; version="1.3"; sha256="0msxmrj4iawxg4vf4r7kj26zalxz4di2w4nxgxiakiig4g4ggy9z"; depends=[class kohonen]; }; @@ -11658,21 +12126,21 @@ in with self; { music = derive2 { name="music"; version="0.1.1"; sha256="04ygmlga7i8bpxcrlmj8wc956asf73krghga6fnh2flm675dp42f"; depends=[audio crayon]; }; musicNMR = derive2 { name="musicNMR"; version="0.0.2"; sha256="09xxc78ajk428yc3617jfxqp5fy89nfc24f1rig6cw28fflwqj0k"; depends=[seewave]; }; musica = derive2 { name="musica"; version="0.1.3"; sha256="0cfzfar706l0xdb0n11m18mayj5rrplvf4qry36vgxsiaxcba90r"; depends=[data_table lubridate magrittr qmap]; }; - mustashe = derive2 { name="mustashe"; version="0.1.2"; sha256="0ihngnjay9zg8570za2rja0m2hxjy1ygc4zaif862sqflza68kdp"; depends=[digest formatR qs tibble]; }; mut = derive2 { name="mut"; version="1.1"; sha256="0v0vviarsmaiap3fa82ia01cblana65fd3cbj7jkd3aral6pm6yz"; depends=[expm Familias IBDsim paramlink]; }; mutSignatures = derive2 { name="mutSignatures"; version="2.1.1"; sha256="0skw92633mwckkkgkncfv09wvnr910nf4wdbqz0a61cl7mxlsr25"; depends=[cluster doParallel foreach ggplot2 pracma proxy]; }; mutoss = derive2 { name="mutoss"; version="0.1-12"; sha256="1yk7p7pb2xm38d3j19ysgwmix48lvimbhkhjjwk5jmr1a0ysx298"; depends=[multcomp multtest mvtnorm plotrix]; }; mutossGUI = derive2 { name="mutossGUI"; version="0.1-11"; sha256="08pcca9gzns83az6jbjzv4xhm1wgmchhzz4f54x1aq0nmvsz3qq1"; depends=[CommonJavaJars JavaGD JGR multcomp mutoss plotrix rJava]; }; - mvGPS = derive2 { name="mvGPS"; version="1.0.2"; sha256="0ym940q2spqjcvkrm58mm3mcxkj2zz7l9giz2filq5r0xikvqir7"; depends=[CBPS cobalt gbm geometry MASS matrixNormal Rdpack sp WeightIt]; }; + mvGPS = derive2 { name="mvGPS"; version="1.1.1"; sha256="02yr24lqiq3xagh95pki9wm8wxa5awpmwdm8gj6p5dhlrngxxjpd"; depends=[CBPS cobalt gbm geometry MASS matrixNormal Rdpack sp WeightIt]; }; mvLSW = derive2 { name="mvLSW"; version="1.2.3"; sha256="05g6v4jbg1km2215lxbwzx8frr4in7xal9pai3y6l23d66lvh1iz"; depends=[fields wavethresh xts zoo]; }; mvMISE = derive2 { name="mvMISE"; version="1.0"; sha256="0lnc5g3ksl5cvwylh8p8baxyvq3z32a2i337q7lhg00j031ccy5c"; depends=[lme4 MASS]; }; - mvMORPH = derive2 { name="mvMORPH"; version="1.1.3"; sha256="0ilfq67vl4kjn3qz2wmyqsiymb4x9bry56hii4whw3an23r25plc"; depends=[ape corpcor glassoFast pbmcapply phytools spam subplex]; }; + mvMORPH = derive2 { name="mvMORPH"; version="1.1.4"; sha256="0dxqi9ml49hzpdgb03fqk1af8rirdcgi5pwil87c89g638c37nrq"; depends=[ape corpcor glassoFast pbmcapply phytools spam subplex]; }; mvMonitoring = derive2 { name="mvMonitoring"; version="0.1.0"; sha256="03nvq8nmrmrpzyxlsqzww5ghk640115l1jgmgwfahhjxkdpkzfxx"; depends=[BMS dplyr lazyeval plyr rlang robustbase xts zoo]; }; - mvPot = derive2 { name="mvPot"; version="0.1.4"; sha256="04l9dn8amwp366b6lic5fkl4kck0x2m3xcsqz6as4c3h772nhq1w"; depends=[evd gmp MASS numbers]; }; + mvPot = derive2 { name="mvPot"; version="0.1.5"; sha256="18kzlz42ridmwjrai6f598vvhmvk7gwyp869qjqclbf9jpc1xlcx"; depends=[evd gmp MASS numbers]; }; + mvProbit = derive2 { name="mvProbit"; version="0.1-10"; sha256="1iy249mc5fi72l0lcvjrn40fn6q1m8hj8njcl0li2z6lzydifkd4"; depends=[abind bayesm maxLik miscTools mvtnorm]; }; mvQuad = derive2 { name="mvQuad"; version="1.0-6"; sha256="016477dhjdkqiadc631vzpbp967mn4yli6by3s1k348mlfirwsi3"; depends=[data_table statmod]; }; - mvSLOUCH = derive2 { name="mvSLOUCH"; version="2.6.1"; sha256="1sm7yyvqjj9wljd0wz1qjw59n271fbvanzly82sflm28ikq5xdm9"; depends=[abind ape Matrix matrixcalc mvtnorm ouch PCMBase TreeSim]; }; + mvSLOUCH = derive2 { name="mvSLOUCH"; version="2.6.3"; sha256="11h14mwvv6xci8n355yd17115giyc6ny5gidrrmrf8npi43rrmsz"; depends=[abind ape Matrix matrixcalc mvtnorm ouch PCMBase TreeSim]; }; mvShapiroTest = derive2 { name="mvShapiroTest"; version="1.0"; sha256="0zcv5l28gwipkmymk12l4wcj9v047pr8k8q5avljdrs2a37f74v1"; depends=[]; }; - mvabund = derive2 { name="mvabund"; version="4.1.6"; sha256="0aisvax9d7bk6aykrcdcn1ji618r520mcrkr1i3jnck1qs31z41f"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; + mvabund = derive2 { name="mvabund"; version="4.1.9"; sha256="19kyg0agjk7gxipa5kmklz4cqh97xrdbibmmy1g99r1gp3s9ml30"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; mvbutils = derive2 { name="mvbutils"; version="2.8.232"; sha256="0awd0jy492ha321c20kmmgl20kqphdmrmswakc0rq6h8z9d55kdg"; depends=[]; }; mvc = derive2 { name="mvc"; version="1.3"; sha256="0kmh6vp7c2y9jf71f4a29b0fxcl0h7m4p8wig4dk3fi7alhjf7ym"; depends=[rattle]; }; mvcluster = derive2 { name="mvcluster"; version="1.0"; sha256="0yfl31scdgsiljvpv1yxc5bwwzr6kbhpjwqh2kql7xf0m0hc1pr4"; depends=[Rcpp RcppArmadillo]; }; @@ -11689,13 +12157,12 @@ in with self; { mvnormalTest = derive2 { name="mvnormalTest"; version="1.0.0"; sha256="1hbapcmj1rzrdzlbkay94f3r2388sk60zizh48vbbkc83qlm7xbr"; depends=[copula moments nortest]; }; mvnormtest = derive2 { name="mvnormtest"; version="0.1-9"; sha256="1iaxjwp7bgxhaa4xqvgqb61316mq2fb0452d0pabhmbxkvmvdnj6"; depends=[]; }; mvnpermute = derive2 { name="mvnpermute"; version="1.0.0"; sha256="0mbyj5i5vysrnl3pgypl0cjf3sylsvzfl1pcxkn0q16560vqh2ba"; depends=[]; }; - mvord = derive2 { name="mvord"; version="1.1.0"; sha256="1jgm2z6ad10xnihw30syw4rcxbgv849z898mj2n65bmncn147rqp"; depends=[BB dfoptim MASS Matrix minqa mnormt numDeriv optimx pbivnorm ucminf]; }; + mvord = derive2 { name="mvord"; version="1.1.1"; sha256="0flqdsjigv8c6ygiih17kp22yrbs2wqydadqi5ij145a6r8bpkml"; depends=[BB dfoptim MASS Matrix minqa mnormt numDeriv optimx pbivnorm ucminf]; }; mvoutlier = derive2 { name="mvoutlier"; version="2.0.9"; sha256="1d562h3xicq962h27fi95qhrz9vkwxk0p8axhps1cy4b49w4bygi"; depends=[robCompositions robustbase sgeostat]; }; mvp = derive2 { name="mvp"; version="1.0-8"; sha256="0i2fd9s0dlpaa4vwkiq5is2d4vxc90hkdl0yk57gl651i8nxwnha"; depends=[magic magrittr mpoly partitions Rcpp]; }; mvprpb = derive2 { name="mvprpb"; version="1.0.4"; sha256="1kcjynz9s7vrvcgjb9sbqv7g50yiymbpkpg6ci34wznd33f7nrxm"; depends=[]; }; mvrsquared = derive2 { name="mvrsquared"; version="0.1.1"; sha256="1bvq5m33ff4igvg7b1wdp8g393qxswlhbpr3gm05fnbsxzlna10p"; depends=[Matrix Rcpp RcppArmadillo RcppThread]; }; mvrtn = derive2 { name="mvrtn"; version="1.0"; sha256="0k0k76wk5zq0cjydncsrb60rdhmb58mlf7zhclhaqmli1cy697k8"; depends=[]; }; - mvsf = derive2 { name="mvsf"; version="1.0"; sha256="1krvsxvj38c5ndvnsd1m18fkqld748kn5j2jbgdr3ca9m3i5nlwf"; depends=[mvnormtest nortest]; }; mvst = derive2 { name="mvst"; version="1.1.0"; sha256="03q0kdychsmn4wcn50b6dqhxn4f2mjvrr5rac942xdv75w8qklc9"; depends=[MCMCpack mnormt mvtnorm]; }; mvtmeta = derive2 { name="mvtmeta"; version="1.1"; sha256="0s0s5922c5rs8cqk100nci3akqnhbvibm2n2gn8049v3qcyfajyb"; depends=[gtools]; }; mvtnorm = derive2 { name="mvtnorm"; version="1.1-1"; sha256="1pj51mi0g6ip7a2nhzc93yv9289kaayvspjvsbgbgarvx7axlrg9"; depends=[]; }; @@ -11705,7 +12172,7 @@ in with self; { mwshiny = derive2 { name="mwshiny"; version="2.1.0"; sha256="0c1a0d9qnaszffhzanmk31mdxqi7j3rn6bk7a3dwg4bq1da3rlgl"; depends=[htmltools shiny]; }; mxkssd = derive2 { name="mxkssd"; version="1.1"; sha256="0m9763dqrk8qkrvp18bsv96jv0xhc2m8sbxdk6x3w6kdjcl663p2"; depends=[]; }; mxmmod = derive2 { name="mxmmod"; version="1.0.1"; sha256="0rb0dqd4dzf5agij4cikz9a8cf6saz2q7bybxjagb8y4yjyhy2xv"; depends=[OpenMx]; }; - myTAI = derive2 { name="myTAI"; version="0.9.2"; sha256="1inf6625qxr57jkwx5h3f3rdmlxf74my8bvigl8hxivd9z5z3wbl"; depends=[doParallel dplyr edgeR fitdistrplus foreach ggplot2 gridExtra nortest RColorBrewer Rcpp RcppArmadillo readr reshape2 scales taxize tibble]; }; + myTAI = derive2 { name="myTAI"; version="0.9.3"; sha256="0fd6srvwzqir8zif56cnyi02c952fgc67xzc17wn7xvmvljfvh4x"; depends=[cpp11 doParallel dplyr edgeR fitdistrplus foreach ggplot2 gridExtra nortest RColorBrewer Rcpp RcppArmadillo readr reshape2 scales taxize tibble]; }; mycobacrvR = derive2 { name="mycobacrvR"; version="1.0"; sha256="1xd9ackzdd8db6bayza0bg4n256mi9rdqih0cdc0nl212c3iz75g"; depends=[]; }; mycor = derive2 { name="mycor"; version="0.1.1"; sha256="00hqmvga22bv43833s974s7ky7lbry3r2bb5kza7kvkn1p6773rg"; depends=[lattice]; }; myepisodes = derive2 { name="myepisodes"; version="1.1.1"; sha256="0xk9bwgpl630nhc8qa2pc0rwqbqk3haxnp78gfxq6sn6z7i44k1p"; depends=[XML]; }; @@ -11714,16 +12181,17 @@ in with self; { nCDunnett = derive2 { name="nCDunnett"; version="1.1.0"; sha256="0q2db1pixqr0wbx4bd05c98i1p0vgaqsfa1iwjxr08c62a5xhkks"; depends=[]; }; nCal = derive2 { name="nCal"; version="2020.9-10"; sha256="1m3d2fskd1vlmwwrhdqs9040fjnjc7jsdsxs0y3m9db7kd1n84iw"; depends=[drc gdata gWidgets2 kyotil]; }; nCopula = derive2 { name="nCopula"; version="0.1.1"; sha256="03qbfvx0lg9prg52fk1jxar2bng2x6scac4g2c64kvp6vmf6x4mv"; depends=[copula Deriv stringi stringr]; }; + nCov2019 = derive2 { name="nCov2019"; version="0.4.4"; sha256="096za68qwlharm0v67hcpmh2i9wzqs5p7l4gv30g4zlq97wgkqpq"; depends=[downloader ggplot2 jsonlite RColorBrewer]; }; nFCA = derive2 { name="nFCA"; version="0.3"; sha256="1jyyzagmppm3i7vh3ia4ic0zql1w04f66z81v0zpdihd4cbl5ra7"; depends=[]; }; nFactors = derive2 { name="nFactors"; version="2.4.1"; sha256="1diybai7pwaj9adn60b7nhvvpjjkwg3jimwp2ahgca9askmv93h2"; depends=[lattice MASS psych]; }; nJira = derive2 { name="nJira"; version="0.1.1"; sha256="0vh167kxljp68f0dx307wl6fp8nlp34vgrkr815z30mhx03p8j9r"; depends=[httr plyr rjson]; }; nLTT = derive2 { name="nLTT"; version="1.4.3"; sha256="0gpmlvam7k4gsiidblfl4f57mgkbq2pakzqak4yx4pxa9f8gpilm"; depends=[ape coda deSolve testit]; }; - nVennR = derive2 { name="nVennR"; version="0.2.2"; sha256="1nhi2fb1r9gfymypr9r3141hpp3arknrifby5d5j12ajm6kdfva0"; depends=[Rcpp]; }; + nVennR = derive2 { name="nVennR"; version="0.2.3"; sha256="035gblc8427v0vq288rib3jfpz5fmcpvqg6nfaijwmbkz3gd41b6"; depends=[Rcpp]; }; na_tools = derive2 { name="na.tools"; version="0.3.1"; sha256="1lbzsckfg297n85kzbin65x1l6qgg9l50hd3xi2gflxc7n2xb8bw"; depends=[]; }; naaccr = derive2 { name="naaccr"; version="1.0.0"; sha256="1hw74a2gjm3gxq0s0qlndhqw0vij6p31walz1ic741z7hqsffqq7"; depends=[data_table stringi]; }; nabor = derive2 { name="nabor"; version="0.5.0"; sha256="1nj39cdfwrmhgsi3cq8imxv3n6xzc1v6dzdb2cf2hybjk368v4s7"; depends=[BH Rcpp RcppEigen]; }; - nadiv = derive2 { name="nadiv"; version="2.16.2.0"; sha256="0gvpl8jrczk9afc7qg6w8w0gn28nia5mh3vanlsp7j0kj3vzqqc5"; depends=[Matrix]; }; - naijR = derive2 { name="naijR"; version="0.1.4"; sha256="0yb5g2qp7ascri7sq0pbfg4ii27w5js75s64y5515cv57x2fwfwp"; depends=[lifecycle magrittr mapdata maps RColorBrewer rgdal rlang]; }; + nadiv = derive2 { name="nadiv"; version="2.17.1"; sha256="1v1fbnps55pbaz0q88y8vrxjd503krymc7f8i0xx3yxgdxl56x8q"; depends=[Matrix]; }; + naijR = derive2 { name="naijR"; version="0.2.2"; sha256="1bglap4pibi653wkm6qq2x4f1390ljnmq020zx0qr9515973lmsv"; depends=[lifecycle magrittr mapdata maps RColorBrewer rgdal rlang]; }; naivebayes = derive2 { name="naivebayes"; version="0.9.7"; sha256="070m78d8hsbqfbapb6g8vvh91gyznqfdpqsaq6z3raps8zlybsag"; depends=[]; }; naivereg = derive2 { name="naivereg"; version="1.0.5"; sha256="1cxfl419pp7xh1xrad29gvpn6hm0rhk40vylj97ypndh6gmnynzz"; depends=[glmnet gmm grpreg ncvreg]; }; nakagami = derive2 { name="nakagami"; version="1.0.0"; sha256="1i9m1nlqfdk9k3bzf8qlfc11spzfqly49n1pk7phvykzjgd1c1s4"; depends=[assertthat]; }; @@ -11731,29 +12199,30 @@ in with self; { namer = derive2 { name="namer"; version="0.1.5"; sha256="1687x6rc46bp2bmqkixzry5cc7lxjqwjk8ngrbg2fk7mzb4pwvnq"; depends=[dplyr fs glue magrittr purrr rstudioapi tibble]; }; namespace = derive2 { name="namespace"; version="0.9.1"; sha256="1bsx5q19l7m3q2qys87izvq06zgb22b7hqblx0spkvzgiiwlq236"; depends=[]; }; nametagger = derive2 { name="nametagger"; version="0.1.1"; sha256="17g8y7x83p1pkgj5hgildndchxsp70va25h93p7r1yjllm56zqv8"; depends=[Rcpp]; }; - nandb = derive2 { name="nandb"; version="2.0.7"; sha256="0l71dj1v6skqq2ir2sgfrvrq2bijzgac9s220g2zacijsisn2j4v"; depends=[assertthat autothresholdr BBmisc checkmate detrendr dplyr filesstrings ggplot2 glue ijtiff magrittr purrr Rcpp reshape2 rlang stringr viridis withr]; }; + nandb = derive2 { name="nandb"; version="2.0.8"; sha256="0cw0cl75z6r2nsdfg0bffnz9v0d8cpwyc7mnfkkhb7nmvsv0hiz3"; depends=[assertthat autothresholdr BBmisc checkmate detrendr dplyr filesstrings ggplot2 glue ijtiff magrittr purrr Rcpp reshape2 rlang stringr viridis withr]; }; naniar = derive2 { name="naniar"; version="0.6.0"; sha256="0m3y9rh3qx8k66h8by0jvg4927k5azppdhihr413136xa57wd4ww"; depends=[dplyr forcats ggplot2 glue magrittr purrr rlang tibble tidyr UpSetR viridis visdat]; }; - nanny = derive2 { name="nanny"; version="0.1.8"; sha256="0pfh4vs81z1bcjgjnsdwz62qn66ag9fgqw87imsbs0naw7niyi67"; depends=[dplyr gtools knitr lifecycle lme4 magrittr purrr rlang Rtsne tibble tidyr tidyselect widyr]; }; nanop = derive2 { name="nanop"; version="2.0-6"; sha256="007gdc93pk0vpfmsw7zgfma2k1045n2cxwwsyy276smy0ys9fdhp"; depends=[distrEx rgl]; }; - nanostringr = derive2 { name="nanostringr"; version="0.1.4"; sha256="1g1hm5kz2bl3qqs2cz4nhvmak7mbh5pry34lp6lwnbxrgi97i1iz"; depends=[assertthat ccaPP dplyr epiR magrittr purrr rlang]; }; + nanostringr = derive2 { name="nanostringr"; version="0.2.0"; sha256="13rcc33zfqlx8m5bmr5hh87gp0g5wlg2cwlj1683kw9adj2y3fdf"; depends=[assertthat ccaPP dplyr epiR magrittr purrr rlang]; }; nanotime = derive2 { name="nanotime"; version="0.3.2"; sha256="079bybkizlq51g4hfw1jclwfcw71i1wi344ia6lhbdh1r8xkrxcy"; depends=[bit64 Rcpp RcppCCTZ RcppDate zoo]; }; naptime = derive2 { name="naptime"; version="1.3.0"; sha256="1cadfv5sdsmz61kf96hf2gbnghf24q40g5c3h9b8prvkxslap691"; depends=[lubridate]; }; - nardl = derive2 { name="nardl"; version="0.1.5"; sha256="1xi1fkwgkfc1b8qsgi4lrjx419778qk0vxzl23azcziwa6fha5p8"; depends=[Formula gtools strucchange tseries]; }; + nardl = derive2 { name="nardl"; version="0.1.6"; sha256="1vf8im4zs4j0v3k617aaskq9n2fg8sn3j5bllcbz2ircrpijr21m"; depends=[car Formula gtools MASS strucchange tseries]; }; narray = derive2 { name="narray"; version="0.4.1"; sha256="09n50shk2gy1m85kmvq8g3zh2nrikpllv8gph9x2id1p62rbqf1y"; depends=[progress stringr]; }; nasadata = derive2 { name="nasadata"; version="0.9.0"; sha256="0y88qdy8c1y0prsajxic5vdqfixv9knjsbhw3vbfac8wv3a69bjl"; depends=[dplyr jsonlite plyr png]; }; nasapower = derive2 { name="nasapower"; version="3.0.1"; sha256="012z2q3fzb7834g3axnw9ivwyq073kll14gds64ks0nlj2z3gcgl"; depends=[crul curl jsonlite lubridate readr tibble]; }; nasaweather = derive2 { name="nasaweather"; version="0.1"; sha256="05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb"; depends=[]; }; + naspaclust = derive2 { name="naspaclust"; version="0.1.0"; sha256="0b4dayb1nlrxal6zpkgp3vc65vkyc6ikx030yarphqm9s6p9d7bx"; depends=[beepr rdist Rdpack stabledist]; }; nat = derive2 { name="nat"; version="1.8.16"; sha256="0m60ysh02f7mg8rfjxn3vbyir4hnl3wpz56pnkjqq9clrnl145a9"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; nat_nblast = derive2 { name="nat.nblast"; version="1.6.5"; sha256="0fp01rrvz7n84sdmfhi0wzd9mvg7wi682l4qg5dj82cm98v80l3p"; depends=[dendroextras nabor nat plyr rgl spam]; }; nat_templatebrains = derive2 { name="nat.templatebrains"; version="1.0"; sha256="0bjib2brsq389b1rlznhwd81y9awk9qz57s4z5ai45gnsc7cfcgw"; depends=[digest igraph memoise nat rappdirs rgl]; }; nat_utils = derive2 { name="nat.utils"; version="0.5.1"; sha256="12g87ar795xfbz7wljksb24x9hqvcirjr50y4mbpx1427r0l7clv"; depends=[]; }; nationwider = derive2 { name="nationwider"; version="1.1.1"; sha256="1crflv2wvrsyrhl612f7awvm0yfhl381q7pq190n3ydg093y32r6"; depends=[dplyr httr lubridate magrittr readxl rvest stringr tidyr xml2 zoo]; }; - natmanager = derive2 { name="natmanager"; version="0.4.6"; sha256="0vd8aipjk0dd8924g4sm3b33pf4af71d0vkm7vnwasmcgb15ki0v"; depends=[curl gh remotes usethis withr]; }; + natmanager = derive2 { name="natmanager"; version="0.4.7"; sha256="081r2gdcbh6xqrbmd6bpn9zd3lq4z7l9myk2xl2iwvmmdvk5qrak"; depends=[curl gh remotes usethis withr]; }; natserv = derive2 { name="natserv"; version="1.0.0"; sha256="1j6m0fddrhq36qfjmj99zs77vxk5waqkshxi37pr2ccnis9hzy9h"; depends=[crul jsonlite tibble]; }; natural = derive2 { name="natural"; version="0.9.0"; sha256="0zxwbf3gg2h0bhl2w0md3rd162vlsgg0dv3187hc0ax7333cc4cx"; depends=[glmnet Matrix]; }; naturalsort = derive2 { name="naturalsort"; version="0.1.3"; sha256="0mz801y9mzld9ypp3xmsjw2d8l9q97sdnv09wrci9xi3yg2sjf6d"; depends=[]; }; nawtilus = derive2 { name="nawtilus"; version="0.1.4"; sha256="1agqx9wiiypkpjrwahwlw5qkvqgkh01swyzc75csf9698x0779pm"; depends=[MASS]; }; - nbTransmission = derive2 { name="nbTransmission"; version="1.1.1"; sha256="0rh16iwkqvv7na4pjhc61sgwnb3h89jnzzd60xcwn98kf6mlvidb"; depends=[caret dplyr lubridate poisbinom rlang tidyr]; }; + nbTransmission = derive2 { name="nbTransmission"; version="1.1.2"; sha256="0vaj2zfyvm2vm1ly1419ysxxrqkv73802n96ifajknh1pair31zk"; depends=[caret dplyr lubridate poisbinom rlang tidyr]; }; + nbapalettes = derive2 { name="nbapalettes"; version="0.1.0"; sha256="1wrh2qcm90fcybhcc8wvs2s4a4z8y3mrhc28dvrkwynqwzsbalzs"; depends=[dplyr]; }; nbconvertR = derive2 { name="nbconvertR"; version="1.3.2"; sha256="0yhmz177r1miain65vspclahhz8cg7638ldbpsw8ylgf7a60l0sg"; depends=[]; }; nbpMatching = derive2 { name="nbpMatching"; version="1.5.1"; sha256="0f90k9vq05gkc0sgywb98frig63df0ih4z41dq7m2inx1zk5rqns"; depends=[Hmisc MASS]; }; nc = derive2 { name="nc"; version="2020.8.6"; sha256="19qsa5k38ajsbigccpch05m156n5wnd7c54j09fanjrpzy2048w2"; depends=[data_table]; }; @@ -11762,20 +12231,20 @@ in with self; { ncbit = derive2 { name="ncbit"; version="2013.03.29"; sha256="0f07h8v68119rjvgm84b75j0j7dvcrl6dq62vp41adlm2hgjg024"; depends=[]; }; ncdf4 = derive2 { name="ncdf4"; version="1.17"; sha256="1xls44ln2zjrrlimxl8v4bk2ni3g45c9j0gxdnjx31rikmrc95fv"; depends=[]; }; ncdf4_helpers = derive2 { name="ncdf4.helpers"; version="0.3-5"; sha256="0ybnnaqfd8mk9mk92q9gd4g1qr55vjxnpmgnwji6h52cdrqa5irx"; depends=[abind ncdf4 PCICt]; }; - ncdfgeom = derive2 { name="ncdfgeom"; version="1.1.0"; sha256="19gbpf19vjzfigi9awhqjx6zsv92h4w1lg3dps3sgaibym9lq3zk"; depends=[dplyr ncmeta RNetCDF sf]; }; + ncdfgeom = derive2 { name="ncdfgeom"; version="1.1.1"; sha256="173hfbvp6pzyxmy0xwir02nmhifmfzl6jipn5pp41c947gyg8vwx"; depends=[dplyr ncmeta RNetCDF sf]; }; ncdump = derive2 { name="ncdump"; version="0.0.3"; sha256="09g98mzpky32z41jf23ahzhyv34l34y1gqq99j2hl4pqlvvhxs9i"; depends=[dplyr ncdf4]; }; ncf = derive2 { name="ncf"; version="1.2-9"; sha256="0wxn004jn4wba2zqnfrd513pw4mjxkmk4n1xj829nxadn1zbkcax"; depends=[]; }; ncg = derive2 { name="ncg"; version="0.1.1"; sha256="1jzkzp61cc5jxmdnl867lcrjjm7y2iw9imzprbd098p1j3w8fvj7"; depends=[]; }; ncmeta = derive2 { name="ncmeta"; version="0.3.0"; sha256="0rip0lb1sccwy94jcr84pimnz5a55gnqf0xwvxyyibmzlwkzsd2b"; depends=[dplyr rlang RNetCDF tibble tidyr]; }; ncodeR = derive2 { name="ncodeR"; version="0.2.0.1"; sha256="1pxiqxhq2rxs8rxxhw1hbds7z2qkf7ws26a8wsbw815yn6jm10n8"; depends=[cli R6 rhoR]; }; ncpen = derive2 { name="ncpen"; version="1.0.0"; sha256="0vl4cbrsifr5s1691gacmp0lk3aqyq0yfafafzv6g3zygi4igrsa"; depends=[Rcpp RcppArmadillo]; }; - ncvreg = derive2 { name="ncvreg"; version="3.12.0"; sha256="1xy2jbb4q9wdahwffjl6lmmlhg2x7s7d0vbv4d50ddq92gd528mv"; depends=[]; }; + ncvreg = derive2 { name="ncvreg"; version="3.13.0"; sha256="04r7nf6516wi0bfxgk5rgbkw6qqa8aprsjivvgym19z9i6qaxanm"; depends=[]; }; ndjson = derive2 { name="ndjson"; version="0.8.0"; sha256="0lvzbgfi1sg4kya1mvv67z14qk3vz9q57x22qh57xq8ampdkg812"; depends=[data_table Rcpp tibble]; }; ndl = derive2 { name="ndl"; version="0.2.18"; sha256="0b235v6jf98rrqp5aqw3jkk7mq8dbqmhb758zbzza1mavh4n2k7s"; depends=[Hmisc MASS Rcpp]; }; ndtv = derive2 { name="ndtv"; version="0.13.0"; sha256="1qfjvq5wch256gmg7pw9jwda33r4963a8p8jmp27cmpzdwycvnzy"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; nearfar = derive2 { name="nearfar"; version="1.2"; sha256="116rq797a5fascirz8xg465fywjf40j1k5czryvqzpik0if0w00r"; depends=[car GenSA MASS nbpMatching]; }; neariso = derive2 { name="neariso"; version="1.0.1"; sha256="1b2gnws75kkqsi8mg9n0zzdaawx57a6zz47cswabj5m6nb09ikh8"; depends=[]; }; - neat = derive2 { name="neat"; version="1.2.2"; sha256="17nwdmx5l87cxljl1h8iksc2f8fp5a5xnf6xrnla7v19c1wjmw0p"; depends=[igraph]; }; + neat = derive2 { name="neat"; version="1.2.3"; sha256="0mdv47l50wzxnjfk1sway7gzpkyf57svqip16fqn0hrc1fsrifbn"; depends=[igraph]; }; neatRanges = derive2 { name="neatRanges"; version="0.1.3"; sha256="1zfp6f1q7m0bks0shvzr120nd5jxba28xhi7vrd55qfy7g72167g"; depends=[data_table Rcpp]; }; neatStats = derive2 { name="neatStats"; version="1.5.1"; sha256="1cyfm9mq691iyi0890gp1kszc98544fhjl35mn3varjbddm64a5p"; depends=[BayesFactor bayestestR car Exact ez ggplot2 ggpubr logspline MBESS plyr PoweR pROC]; }; neatmaps = derive2 { name="neatmaps"; version="2.1.0"; sha256="1kz1na3fzpd8vkxmpp5rz8ksyf8q2wk456csiii82winv9a2zxc9"; depends=[ConsensusClusterPlus dplyr ggplot2 heatmaply igraph]; }; @@ -11788,34 +12257,34 @@ in with self; { neo2R = derive2 { name="neo2R"; version="2.1.0"; sha256="1fhi74d4730pxrmv1p2gz8ylvnilxn4l837nha6ndyhy00xfgkk6"; depends=[base64enc jsonlite RCurl]; }; neo4jshell = derive2 { name="neo4jshell"; version="0.1.1"; sha256="03qnv5xf7dvlzq259brfwk7vfr05q7labakv9mj27x70yhxq1z7m"; depends=[fs magrittr R_utils ssh sys]; }; neo4r = derive2 { name="neo4r"; version="0.1.1"; sha256="0s4rjhn2mc8ca4p8p474a83dc277vrf7l968xwxkiac0d4fgbra7"; depends=[attempt data_table glue httr igraph jsonlite magrittr purrr R6 rlang rstudioapi shiny tibble tidyr tidyselect]; }; - neonUtilities = derive2 { name="neonUtilities"; version="1.3.8"; sha256="0a52pjxf528s70nn0fzpyvp4aj1591mrp8gy4vafjhlbywrxxv4x"; depends=[curl data_table downloader dplyr httr jsonlite lubridate pbapply plyr R_utils readr stringr tidyr]; }; - neonstore = derive2 { name="neonstore"; version="0.3.3"; sha256="098xnkjfwk02vz2jgdbabjn6vw91rvha8vrc87lw91sqadhijva4"; depends=[curl DBI digest duckdb httr jsonlite openssl progress R_utils rappdirs tibble vroom zip]; }; + neonUtilities = derive2 { name="neonUtilities"; version="2.0.1"; sha256="1cvar2bmyh89lsc1h6bpv9bqr3p74bm9g016bysamk34rp4fx83h"; depends=[curl data_table downloader dplyr httr jsonlite pbapply R_utils readr stringr tidyr]; }; + neonstore = derive2 { name="neonstore"; version="0.4.3"; sha256="0z6cj2adljwyym4n5s718zl8k2wlbbgq421zpkllj93vnchkjd2c"; depends=[DBI duckdb httr progress R_utils thor vroom zip]; }; neotoma = derive2 { name="neotoma"; version="1.7.4"; sha256="1fknzp7qg5l5lkfvqfld0x67zj3xmi8vivsg70m47mbpcs92hmcf"; depends=[analogue dplyr httr jsonlite leaflet plyr reshape2 xml2]; }; nephro = derive2 { name="nephro"; version="1.2"; sha256="1izmzx8lah322xzb42asfnrvr2c9yqd0zf7fmrhwd3p4rr1rqa7d"; depends=[]; }; - neptune = derive2 { name="neptune"; version="0.1.0"; sha256="0nynxvkzcdsmznyviw18gqky1kw7dxgc13nrsbf6999lr3s3shkj"; depends=[reticulate]; }; + neptune = derive2 { name="neptune"; version="0.1.2"; sha256="1yk5w7520flprs7wvsdfmsdyg85snpcm7q9gjh3cx2fhaj5xvcl3"; depends=[reticulate]; }; nesRdata = derive2 { name="nesRdata"; version="0.3.1"; sha256="1lxvg11g8nizfn8sghirq2749fs9i4w1wiaz3v1djqbkzqcqfrcj"; depends=[dataone dplyr purrr rappdirs readr]; }; nestfs = derive2 { name="nestfs"; version="1.0"; sha256="0lzbjj287s5kmw9635gfyl3jdgfh5mxbwxqxmnwynbwccixk0akc"; depends=[dgof pROC]; }; + nestr = derive2 { name="nestr"; version="0.1.1"; sha256="1azk3rjr9kkdqw1z5v49gmwd7i31jdmx332jpdnys6vwqci52zk0"; depends=[magrittr rlang tidyselect vctrs]; }; netClust = derive2 { name="netClust"; version="1.0.1"; sha256="1h58ispdx8ddsnqrrmcxn2rbqb0hb89gpjg4p14mr7vhxw5c9zva"; depends=[Rcpp RcppArmadillo]; }; - netCoin = derive2 { name="netCoin"; version="1.1.26"; sha256="1ripd7d8jb4wn59kgbwng3mzd3lla8013y5v59qk074mwl4pa75r"; depends=[haven igraph Matrix]; }; + netCoin = derive2 { name="netCoin"; version="1.2.21"; sha256="15f75994z25c25kh6888b6nz2pcf3yg76f0iscz8bgp2jwcm7ym2"; depends=[haven igraph Matrix]; }; netSEM = derive2 { name="netSEM"; version="0.5.1"; sha256="0k4ngl4p1v2rp1sf2x65m7p0cd6ha98fyx21b73ki0531q0d9fil"; depends=[DiagrammeR DiagrammeRsvg gtools htmlwidgets knitr magrittr MASS png rsvg segmented svglite]; }; netassoc = derive2 { name="netassoc"; version="0.6.3"; sha256="1hyshnbpq60a3y13b4sh1c2rk78x09q01b7q6xrgv10w7bn9r2sg"; depends=[corpcor huge igraph infotheo vegan]; }; netchain = derive2 { name="netchain"; version="0.2.0"; sha256="1skpf1n6a17mjkcxqpl6vrskk04yvqa0v4n2zw9x5r1h46q9m6qk"; depends=[gtools igraph Matrix Rcpp stringr]; }; netcom = derive2 { name="netcom"; version="1.0.4"; sha256="0fka14sffm0p1gldk27fd62ng05spfpbn665b4w5hdf1z4z0bs20"; depends=[clue expm igraph Matrix pdist pracma vegan]; }; netcontrol = derive2 { name="netcontrol"; version="0.1"; sha256="1gskb728ycnhz9a9g9ghm0dz3ajf3dzgyv23bsk9i01wj9hrxhc0"; depends=[expm MASS Matrix pracma Rcpp RcppArmadillo Rdpack]; }; - netdep = derive2 { name="netdep"; version="0.1.0"; sha256="0mrbqn5d8iqvs98a0kski0vya135z7l902xafya96s2h288jchx7"; depends=[igraph igraphdata MASS mvrtn]; }; netdiffuseR = derive2 { name="netdiffuseR"; version="1.22.0"; sha256="1cmnrqsgxh391pm2jz4yg20hpsbhjrfx8w1qnydk5lyj44kzf4fc"; depends=[boot igraph MASS MatchIt Matrix network networkDynamic Rcpp RcppArmadillo sna SparseM viridisLite]; }; netgen = derive2 { name="netgen"; version="1.3.2"; sha256="1yqi4rb6w9ipxgbl1j1s2s81cg7nzrn65irn5gs82hsq94d6vv2j"; depends=[BBmisc checkmate ggplot2 igraph lhs mvtnorm stringr]; }; - netgsa = derive2 { name="netgsa"; version="3.1.0"; sha256="0mn4dnvckdskigdfbszjnfmb3m6yfbz4qc26qwh1wznwx5wmcbf0"; depends=[corpcor dplyr glassoFast glmnet graph graphite igraph magrittr Matrix msigdbr quadprog rlang]; }; netgwas = derive2 { name="netgwas"; version="1.13"; sha256="156axkl61z0s3zm8plkcc3s46x0881mqnk94azl3p0nphblhmhcv"; depends=[glasso huge igraph MASS Matrix qtl RBGL tmvtnorm]; }; netjack = derive2 { name="netjack"; version="1.2.0"; sha256="060ygb0kxi0gx1ya38cmf5hhyy6jkwq5519azdqhq5i324cwzzm7"; depends=[brainGraph ggplot2 igraph Rdpack]; }; - netmeta = derive2 { name="netmeta"; version="1.2-1"; sha256="11yigmk11a9gi3qg3gcszmnp11729qap8yv5pvsss5qfhahfs4qa"; depends=[ggplot2 magic MASS meta]; }; + netmeta = derive2 { name="netmeta"; version="1.3-0"; sha256="1wkva1s9ambik22v1znhfl3srilri1rbsridwaa7a5mr9z233874"; depends=[ggplot2 magic MASS meta metafor]; }; netmhc2pan = derive2 { name="netmhc2pan"; version="1.3.1"; sha256="0q98rar7iglwxmf1274wrjcr7kp544ayrjhd286x68jmf51cqyrg"; depends=[assertive devtools dplyr rappdirs readr seqinr stringr testit tibble]; }; netrankr = derive2 { name="netrankr"; version="0.3.0"; sha256="0siyvd4psr2mh1bd1gr33q569f814bfd8sbnkhvq50h6lj4n51p9"; depends=[igraph Rcpp RcppArmadillo]; }; netregR = derive2 { name="netregR"; version="1.0.1"; sha256="0n5absjra0imddz1spy1piij5rdz76wi4g568yby3rbhkm1896rs"; depends=[Matrix]; }; nets = derive2 { name="nets"; version="0.9.1"; sha256="00adkyd2hm8aynpnk4avzss8fxkbaai74n5cf03vpwyc306jq0d7"; depends=[igraph]; }; + netseg = derive2 { name="netseg"; version="1.0-0"; sha256="0y7pc4dz78l6fi6z810bkzl7550vh4167axbnib55czgf7minhv6"; depends=[igraph]; }; netstat = derive2 { name="netstat"; version="0.1.1"; sha256="1h87cl3ry5hwwqxza3n24zpvwn89hhclsa2400sw4ijdy2ivpn2j"; depends=[]; }; network = derive2 { name="network"; version="1.16.1"; sha256="1cgy7vlbinyndl0zkzvnpcmi240wry6iwfb42sz1mj5c9iwkar7b"; depends=[magrittr tibble]; }; - networkABC = derive2 { name="networkABC"; version="0.7-0"; sha256="0vn5hgry4i1dzgp34vdfa6wifsz54jh05avs9xrbzg6zmf1y2cif"; depends=[network RColorBrewer sna]; }; + networkABC = derive2 { name="networkABC"; version="0.8-0"; sha256="1vbabnkc8yvrxzrnaxj2v92620q1922hbcqbf1z3lmar5dbkql7f"; depends=[network RColorBrewer sna]; }; networkD3 = derive2 { name="networkD3"; version="0.4"; sha256="02wxki67drppgfka1is1ykg1f2rxf0x0657c0crj7ipfy62jbf1k"; depends=[htmlwidgets igraph magrittr]; }; networkDynamic = derive2 { name="networkDynamic"; version="0.10.1"; sha256="183cnxbcly887vmxcvyvwcn19i8s7yyb57k1q5vhimx8vvcxivi2"; depends=[network statnet_common]; }; networkDynamicData = derive2 { name="networkDynamicData"; version="0.2.1"; sha256="176al8jp0gha6yzhyn5flmyackmmdnh1h8sasqrdcmba7ha7cya6"; depends=[network networkDynamic]; }; @@ -11825,33 +12294,35 @@ in with self; { networkreporting = derive2 { name="networkreporting"; version="0.1.1"; sha256="1ssbz8lw4mlwcblwfbyffvayvb2gmihq4qlz5q9222fn4aa3raxd"; depends=[dplyr functional ggplot2 lazyeval plyr reshape2 stringr surveybootstrap]; }; networksis = derive2 { name="networksis"; version="2.1-3"; sha256="1kvil3qs7xd94ak9jgvj1nss55gjg0y7d35zmass9h1hjkcrq7bg"; depends=[network]; }; networktools = derive2 { name="networktools"; version="1.2.3"; sha256="0jj5cbp036vjjfj10i1lxzj4yi06xbdy1j20j6a035s8l2wc57pl"; depends=[cocor eigenmodel ggplot2 gridExtra igraph IsingFit NetworkComparisonTest nnet psych qgraph R_utils RColorBrewer reshape2 smacof wordcloud]; }; - networktree = derive2 { name="networktree"; version="1.0.0"; sha256="0yabs2fzbcvmizr659zpr3mzf69jai3kfz67qcr2lgrkavprzw86"; depends=[Formula gridBase Matrix mvtnorm partykit qgraph reshape2]; }; + networktree = derive2 { name="networktree"; version="1.0.1"; sha256="0hkrqpx7b6sxalw1qyrncck70mx6p5gr57mf558l5mlqi52v7hg0"; depends=[Formula gridBase Matrix mvtnorm partykit qgraph reshape2]; }; neuRosim = derive2 { name="neuRosim"; version="0.2-12"; sha256="1hsnw9xipdr74fydq9013252ycbi9igh28s0j4dbdx52pv3iixzl"; depends=[deSolve]; }; neural = derive2 { name="neural"; version="1.4.2.2"; sha256="05hrqgppgwp38rdzw86naglxj0bz3wqv04akq7f0jxbbjc6kwy4j"; depends=[]; }; neuralnet = derive2 { name="neuralnet"; version="1.44.2"; sha256="09l808vgjh059a3f94vgsprfyp5c1hrbjn6i1cn34cxnbljwsrjz"; depends=[Deriv MASS]; }; - neurobase = derive2 { name="neurobase"; version="1.29.0"; sha256="16y1d4qg4d57l43080vlpn5jnh462qnv9z0w6dv0zwlk74psm9ha"; depends=[abind matrixStats oro_nifti R_utils RNifti]; }; + neurobase = derive2 { name="neurobase"; version="1.32.1"; sha256="0lsgqbdpi2nrgrfnw1hzgkjks625cz0s71b7810sh3f7w78mk43k"; depends=[abind matrixStats oro_nifti R_utils RNifti]; }; neuroblastoma = derive2 { name="neuroblastoma"; version="1.0"; sha256="0hs87fvwaq53xxbh2dw3hjsmf1zkyqli9qyacxf72fnkyhhl8b45"; depends=[]; }; neurocInstall = derive2 { name="neurocInstall"; version="0.12.0"; sha256="1fkb6ji9gigqdjl50hbgdgfidqpjgqlh1aidf6vn4qnfr92bsvqf"; depends=[devtools]; }; neurohcp = derive2 { name="neurohcp"; version="0.9.0"; sha256="02z0lhmw2mr2fk8d8wp7nfcrfl8izds68zskm5j0xfabfb4dwkbx"; depends=[aws_s3 base64enc digest httr xml2]; }; neuroim = derive2 { name="neuroim"; version="0.0.6"; sha256="00cjr6pkip6zi2d0q3qbn3lb3k0z82v6c19qslvgpa9n0g63dr5p"; depends=[abind assertthat hash iterators Matrix Rcpp readr rgl stringr yaImpute]; }; - neuromplex = derive2 { name="neuromplex"; version="0.0-8"; sha256="1bc1kasyibpbfjjy19pmvb9lj61yqx536rgaadkislsxrnisxggs"; depends=[BayesLogit dplyr ggplot2 gridExtra magrittr tidyr]; }; - neutralitytestr = derive2 { name="neutralitytestr"; version="0.0.2"; sha256="1p1zjc3fiphkxflsyzrxx8af98aa0gp9pvby63mmrsjb0z7ps948"; depends=[cowplot dplyr ggplot2 ggpmisc pracma scales]; }; + neuromplex = derive2 { name="neuromplex"; version="1.0-1"; sha256="1zj7x528qv4bp24fx546jj9kf0q0n26jyi65v6h2bl3c61rrb6bz"; depends=[BayesLogit dplyr ggplot2 gridExtra magrittr tidyr]; }; + neutralitytestr = derive2 { name="neutralitytestr"; version="0.0.3"; sha256="1660v7nng6dj9gwn04ynirms0g10wpsz33i26va229zdviqm5cyy"; depends=[cowplot dplyr ggplot2 ggpmisc pracma scales]; }; neverhpfilter = derive2 { name="neverhpfilter"; version="0.3-1"; sha256="1x2sc9v40hrlg60v3887a680359zdql9c7n8y97dh7v8w7mw547x"; depends=[xts zoo]; }; newFocus = derive2 { name="newFocus"; version="1.0"; sha256="067g6b25wz1awp0fdqyh8s53q0vmypfax08s5pz5i59wb9k8pgzs"; depends=[ctgt]; }; newTestSurvRec = derive2 { name="newTestSurvRec"; version="1.0.2"; sha256="06p782md33wqh5wa1735yg5i01d42p74kl7h5qhqs9cd732ls6pz"; depends=[]; }; newsanchor = derive2 { name="newsanchor"; version="0.1.1"; sha256="1s8qhq9jk5gnsimnvy7kdayya0ks0ly309l7zxm5rafj5x7k5vwn"; depends=[askpass devtools httr jsonlite lubridate tidyr xml2]; }; newscatcheR = derive2 { name="newscatcheR"; version="0.1.0"; sha256="0rm91dfzfjhi51gk65gvq2z7aywg6y8ay3hrjnp6frlmyvh661sp"; depends=[tidyRSS]; }; newsmap = derive2 { name="newsmap"; version="0.7.3"; sha256="0189vw51sdz981fy3k7rns61imgil3vcjyrw3bhr5lyqp00zaicf"; depends=[Matrix quanteda quanteda_textstats stringi]; }; - nflfastR = derive2 { name="nflfastR"; version="3.2.0"; sha256="0hpmji2di826q1hkfjjk9ihcbdss3qhq3mmirjv16v6wa5w0clqm"; depends=[cli crayon dplyr glue gsisdecoder httr janitor jsonlite lubridate magrittr mgcv progressr purrr rlang stringr tibble tidyr tidyselect usethis xgboost]; }; + newsmd = derive2 { name="newsmd"; version="0.3.1"; sha256="0xgrxz0ppvja4avff2l4kjnbw90ynbrziih0iqfjsvnvy92msalg"; depends=[R6]; }; + nfl4th = derive2 { name="nfl4th"; version="1.0.0"; sha256="027n3wbavm4h6nsy2qjlyq2ga11mk0rvxpn6m2x1hcg291gsib9g"; depends=[dplyr glue httr janitor jsonlite magrittr mgcv nflfastR purrr stringr tibble tidyr tidyselect xgboost]; }; + nflfastR = derive2 { name="nflfastR"; version="4.1.0"; sha256="1a4f55nxah7sf5zlsgfvh6xj385icy707a6h7s3hpsc776m2bd1l"; depends=[cli curl dplyr fastrmodels furrr future glue janitor lifecycle lubridate magrittr mgcv progressr rlang stringr tibble tidyr tidyselect usethis xgboost]; }; + nflseedR = derive2 { name="nflseedR"; version="1.0.2"; sha256="061jd3mr06mxs5riwlph3a1hsk5jypws71jy9jzhhqnijdy96bki"; depends=[cli crayon curl dplyr furrr future glue gsubfn magrittr progressr purrr readr rlang tibble tidyr]; }; ngram = derive2 { name="ngram"; version="3.0.4"; sha256="1q4y64dy7vcjikbfx20fpdiy1kwvxay4y90xr5j8d8zkqnva0way"; depends=[]; }; ngramr = derive2 { name="ngramr"; version="1.7.2"; sha256="10jm8gjr2fjyr1xvgn6g5w2l7p7xn33jgvy53hhkdlhksfsmlfis"; depends=[cli dplyr ggplot2 httr lifecycle RCurl rjson rlang scales stringr textutils tibble tidyr xml2]; }; ngramrr = derive2 { name="ngramrr"; version="0.2.0"; sha256="1p8s4p3h27g647rxx9qjfad5dzbngjbmvhw4gz0jbsmfqrsf72by"; depends=[tau tm]; }; ngspatial = derive2 { name="ngspatial"; version="1.2-2"; sha256="09hdvmbna4m62zv18k5kj9718wzw7p43wnal2j6aa0m5sd2rx9rz"; depends=[batchmeans Rcpp RcppArmadillo]; }; - nhanesA = derive2 { name="nhanesA"; version="0.6.5"; sha256="0bb53s379qrm8xqp4bsi5vgk6v6hvwadzjv09pvdp1n45z7rqj86"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; - nhdR = derive2 { name="nhdR"; version="0.5.3"; sha256="0zd10zy9kn97nm2i0y8h5wjdmzxblv5azybycwf08aqr0x6axh3n"; depends=[curl dplyr foreign gdalUtils ggplot2 httr maps memoise purrr rappdirs rgdal rlang rvest sf stringr units xml2]; }; - nhdplusTools = derive2 { name="nhdplusTools"; version="0.3.16"; sha256="12vyqk341gy6bprln62lf3w2y1rbl24gf132005p8h2j3lmnjg3i"; depends=[dplyr httr igraph jsonlite magrittr prettymapr R_utils RANN rosm sf tidyr units xml2]; }; - nhds = derive2 { name="nhds"; version="1.0.3"; sha256="1cgw3hmsik3vlnb1lgalhvhrqzwdv08dp80vwpw1nwbf8whcbxjn"; depends=[]; }; - nhlapi = derive2 { name="nhlapi"; version="0.1.2"; sha256="13zzy0z2vw8f3q2jy67690w9p71y3rf34xccy5ir49iaflmy4i89"; depends=[jsonlite]; }; + nhanesA = derive2 { name="nhanesA"; version="0.6.5.3"; sha256="00sfbzh7r2lvc19prjm3zfgs62j6frh5rw6jvb25z8wzrhw52z3f"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; + nhdR = derive2 { name="nhdR"; version="0.5.4"; sha256="0fi9bl53j2qvd0y7m6fqcks69wv8d812p3rdpzpzi12p9iiw8j7r"; depends=[curl dplyr foreign gdalUtils ggplot2 httr maps memoise purrr rappdirs rgdal rlang rvest sf stringr units xml2]; }; + nhdplusTools = derive2 { name="nhdplusTools"; version="0.4.0"; sha256="1i3kraai4byy17v60a4v29x7fwq0yxljsk2wd4sbh7b29i9v2vha"; depends=[dataRetrieval dplyr fst httr igraph jsonlite magrittr prettymapr R_utils RANN rappdirs rosm sf tidyr units xml2 zip]; }; + nhlapi = derive2 { name="nhlapi"; version="0.1.4"; sha256="1c5s7fd9agzk20xi8v38dk8ih6lmn8c90mxncyr996bhipgr7vl3"; depends=[jsonlite]; }; nhlscrape = derive2 { name="nhlscrape"; version="0.1.3"; sha256="0x6y747j6lha3jw4v2wavgd12xw5nx4m8biv9rmq9z0qy53vncjc"; depends=[DBI httr jsonlite RSQLite rvest xml2]; }; nhm = derive2 { name="nhm"; version="0.1.0"; sha256="1yf9hnbmfb7xj8mbhnq40wvd0pd88x9qspy1jr3x0n8nb75i3jlp"; depends=[deSolve maxLik mvtnorm]; }; nhs_predict = derive2 { name="nhs.predict"; version="1.4.0"; sha256="0lgyi1v940pjqfpwligw5ml6vagiz8wwsxbr9kfd1j70b5i0kjwd"; depends=[]; }; @@ -11861,17 +12332,18 @@ in with self; { nicheROVER = derive2 { name="nicheROVER"; version="1.0"; sha256="0sa7wfpzkin78vz48vwa5iac82v5l1s3zczdxz8sc2kyg22fj0aw"; depends=[mvtnorm]; }; nichevol = derive2 { name="nichevol"; version="0.1.19"; sha256="0qj5cb0fyw0x1bczl6l0kl6jqir4yg8sb9fsfkd3h64d0ls2arl5"; depends=[ape castor concaveman geiger raster rgdal rgeos sf sp stringr]; }; nightmares = derive2 { name="nightmares"; version="0.0.2"; sha256="1dmqrb17ncwazy1nb0zzfy7fq51ah7rz0xmhmmx6d30paaix2vc7"; depends=[raster rgdal sp]; }; - nilde = derive2 { name="nilde"; version="1.1-3"; sha256="0h88if7dh16inyy5zh0yjqmc0c57k99la038p5vlwkj62vvjscmm"; depends=[]; }; + nilde = derive2 { name="nilde"; version="1.1-4"; sha256="1zw952sqqxcxniyi7s0901xzqqpxqxdbisab9f3rv1i3kikcaa60"; depends=[]; }; nima = derive2 { name="nima"; version="0.6.2"; sha256="0n8r8h1m0v0ssbpv6p32jby49f45qbicwr0awm7x054p48qk49cy"; depends=[assertthat dplyr ggplot2 ggthemes gridExtra gtools scales]; }; - nimble = derive2 { name="nimble"; version="0.10.1"; sha256="00p7f0xv079rld2wwvdndwp4p6qw73cyyh06b71k7wj2lkyliqhi"; depends=[coda igraph R6]; }; - nimbleEcology = derive2 { name="nimbleEcology"; version="0.3.1"; sha256="1bny7srs1cixvqpmqw3wdcc41d88y3yiiy6mmxa2hsmjzcryw3bs"; depends=[nimble]; }; - nimbleSCR = derive2 { name="nimbleSCR"; version="0.1.0"; sha256="0bnbg774ncmdyclgskywwrbnyj99gk57p0v1cms1b2bgv8ww03wj"; depends=[nimble]; }; + nimble = derive2 { name="nimble"; version="0.11.0"; sha256="03ryxc7yaf3vaghzrb1fnjgsrmwjfxhxza0m4k976qz3hhh0hmds"; depends=[coda igraph R6]; }; + nimbleEcology = derive2 { name="nimbleEcology"; version="0.4.0"; sha256="1qpwjzxgcmfqfp2ccjkngvjymqsyxvhvcs43vvynx30xgrj3nzdm"; depends=[nimble]; }; + nimbleSCR = derive2 { name="nimbleSCR"; version="0.1.1"; sha256="0bkq6ds9qyqf8s4r7cfvi02r9vh10jiqrgrsanyadwni1bzm94jj"; depends=[nimble]; }; nimbleSMC = derive2 { name="nimbleSMC"; version="0.10.0"; sha256="15abjhgq8mi8c079hfzwjyl5glchx606hciq2lsirkrbyvc7b23n"; depends=[nimble]; }; nipals = derive2 { name="nipals"; version="0.7"; sha256="14rq54qy4gc4l9f5h48vrsrh7sb0wzzxbvjn0zax82pz2fw6nybx"; depends=[]; }; nipnTK = derive2 { name="nipnTK"; version="0.1.0"; sha256="0imy2x1h9d842ssw7hmmh21c4mj7s6y05mmjin1270skbnrk2zmr"; depends=[bbw withr]; }; nitrcbot = derive2 { name="nitrcbot"; version="1.2"; sha256="0lainbw9j5aj9s824afpxdjl3q2f728jfpdfji7kpi9hdg8jixhx"; depends=[dplyr httr jsonlite RCurl]; }; nivm = derive2 { name="nivm"; version="0.3"; sha256="111jkgirgsl1j36xgwi81wzwxial3vdw8mqzi1faldxxd9a2cixm"; depends=[bpcp ssanv]; }; - nixmass = derive2 { name="nixmass"; version="1.0-1"; sha256="0yiqmgps9zi46059l0vrqmxp27mv3nn5agand51v3b3x1xz2sq1p"; depends=[lubridate zoo]; }; + nixmass = derive2 { name="nixmass"; version="1.0.2"; sha256="0g8hm0mnbwahbnk44rfciiggxn5bscfni5gqc6y3za496cf9wlk1"; depends=[lubridate zoo]; }; + njtr1 = derive2 { name="njtr1"; version="0.2.0"; sha256="1lwraf77gczf627cy1d8sl0qk05p91b6qib5i5x4486ln00hs6mn"; depends=[curl httr lubridate]; }; nlMS = derive2 { name="nlMS"; version="1.1"; sha256="01ijg1bp3r0dg8ph7qpsx3hqzrrvfhbykml20hqchxk7c5n2w9wz"; depends=[nlme]; }; nlWaldTest = derive2 { name="nlWaldTest"; version="1.1.3"; sha256="1cppdz8qvigjdz4sgr1gm2j09zi407xxmryc28zc7ps7rvgy344h"; depends=[]; }; nlaR = derive2 { name="nlaR"; version="0.4.0"; sha256="05ipw2j4w5r3bpmhqh742yqz5qihx36jnsq08bli8jwsqha9vm8h"; depends=[rappdirs]; }; @@ -11879,16 +12351,17 @@ in with self; { nleqslv = derive2 { name="nleqslv"; version="3.3.2"; sha256="1v9znvncyigw9r25wx2ma0b7ib179b488dl0qsrhp5zrcz7mcjgm"; depends=[]; }; nlgeocoder = derive2 { name="nlgeocoder"; version="0.1.3"; sha256="13d30kfgfsny5gnn3yjfnclky6yixaa8sg0m689rszqxrvbrj79x"; depends=[jsonlite]; }; nlirms = derive2 { name="nlirms"; version="3.4.4"; sha256="1njyfip377a0f6hf9y32s077b4jv4h8ydbjgnl68yfypxbfn2xyx"; depends=[gridExtra gtable]; }; - nlist = derive2 { name="nlist"; version="0.3.0"; sha256="0kfd6nw4lyhd6qsq4pwk1sysh1p00ikzygrz5ywwgnwdqjwcj3dw"; depends=[abind chk coda extras generics lifecycle purrr term tibble universals]; }; - nlme = derive2 { name="nlme"; version="3.1-151"; sha256="1jl6x0glpyszy6bkbcggm3f10jl4kldhs5q561k85xcbssx2dim2"; depends=[lattice]; }; + nlist = derive2 { name="nlist"; version="0.3.1"; sha256="0fbhnm0jldx0xp44fh93ys5084kz4h32vfkp8kzk17fd42pm358z"; depends=[abind chk coda extras generics lifecycle purrr term tibble universals]; }; + nlme = derive2 { name="nlme"; version="3.1-152"; sha256="0pji9vvmjqyk8b7lhxsixnagsrz2hmnwy6ilc2gg5ji1y6qx2rav"; depends=[lattice]; }; nlmeODE = derive2 { name="nlmeODE"; version="1.1"; sha256="1zp1p98mzbfxidl87yrj2i9m21zlfp622dfnmyg8f2pyijhhn0y2"; depends=[deSolve lattice nlme]; }; nlmeU = derive2 { name="nlmeU"; version="0.70-3"; sha256="05kxymgybziiijpb17bhcd9aq4awmp5km67l2py9ypakivi0hc6l"; depends=[nlme]; }; + nlmixr = derive2 { name="nlmixr"; version="2.0.4"; sha256="1gw2xm7nn0sjwk5m5l56x4kasndr52ymmryvaqxwci5x69s9b48l"; depends=[backports BH brew dparser fastGHQuad ggplot2 lbfgsb3c magrittr Matrix minqa n1qn1 nlme Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders symengine]; }; nlmm = derive2 { name="nlmm"; version="1.0.1"; sha256="0q5vz4xqdb510i26zbcq4djcribn7h477akh8f56nzjgq231vhcq"; depends=[BH HI lqmm MASS Matrix mvtnorm nlme numDeriv Qtools Rcpp RcppArmadillo statmod]; }; nlmrt = derive2 { name="nlmrt"; version="2016.3.2"; sha256="1g0qq0a933ay65gkp04qgn2wqk6vw79pj2a228c2ski4rcmkjxyn"; depends=[]; }; nlnet = derive2 { name="nlnet"; version="1.4"; sha256="13lv4b6chsjrhimny3wc1y9ljgbxmm1byj4j04n4vj8icn87gyfd"; depends=[coin e1071 earth fdrtool igraph randomForest ROCR TSP]; }; nloptr = derive2 { name="nloptr"; version="1.2.2.2"; sha256="0whkilb85k4wixvr3k7rygfw1rcs1fs9h8c18kz4p3y1k9hsj3p8"; depends=[]; }; nlpred = derive2 { name="nlpred"; version="1.0.1"; sha256="05jna8hzd5v36a0dwag6zr8ms1pkryas3qarwb946bkxlslffp27"; depends=[assertthat bde cvAUC data_table np Rdpack ROCR SuperLearner]; }; - nlraa = derive2 { name="nlraa"; version="0.76"; sha256="0pyyi7w5xm17rq4zzs9pj9bvn0rwvxlfx3wvqcs7nmmmiasimbcz"; depends=[boot knitr MASS Matrix mgcv nlme]; }; + nlraa = derive2 { name="nlraa"; version="0.89"; sha256="19gvii7ajh1nsv4f3xqqmld35glz422v0ippcxypm2m4jbmp7mag"; depends=[boot knitr MASS Matrix mgcv nlme]; }; nlreg = derive2 { name="nlreg"; version="1.2-2.2"; sha256="0gkcxg5m287axhvkl00xy26vidawhhb1ii1s13rh49v0yccwvvqh"; depends=[statmod survival]; }; nlrr = derive2 { name="nlrr"; version="0.1"; sha256="09wm8s5sadkhkq9pb3fjk66cb2xn8py46w1d7yp7fjhczh31bjsq"; depends=[Hmisc rms]; }; nlrx = derive2 { name="nlrx"; version="0.4.2"; sha256="1knaf7ba8r8va0i8w1r3qqrzvc1zb42sv7j5hbk2jraydbxpbmd6"; depends=[crayon dplyr EasyABC furrr genalg GenSA igraph lhs magrittr progressr purrr raster readr rstudioapi sensitivity sf stringr tibble tidyr XML]; }; @@ -11898,7 +12371,7 @@ in with self; { nlsem = derive2 { name="nlsem"; version="0.8"; sha256="0q3wk7x67mh2447ah807djyklia2x2d45krsskffynazm83msnj9"; depends=[gaussquad lavaan mvtnorm nlme orthopolynom]; }; nlshelper = derive2 { name="nlshelper"; version="0.2"; sha256="02xnx0j8p1im1hdwnia3n51dicscjf8s33y475i3dczvhmivvbmf"; depends=[broom dplyr magicaxis mgcv nlme]; }; nlshrink = derive2 { name="nlshrink"; version="1.0.1"; sha256="0adnr7g3n3brwlvyix8wa7h59gj036l5anv8abqy80ysmfcmsp0y"; depends=[MASS nloptr]; }; - nlsmsn = derive2 { name="nlsmsn"; version="0.0-5"; sha256="1awslzwvv4d3kqw01p7qcqkq5shby29gprzbzxfwnvb5v86dn6ka"; depends=[]; }; + nlsmsn = derive2 { name="nlsmsn"; version="0.0-6"; sha256="1wrqfmsb3l4bsdncyjl7hh3vwj9s6l43p7klww6f4k21asvh4p5s"; depends=[]; }; nlsr = derive2 { name="nlsr"; version="2019.9.7"; sha256="1zhfnv09khd2k236jzka9znc0nlps452gwl7db0grb0ylfyxbqg4"; depends=[digest]; }; nlsrk = derive2 { name="nlsrk"; version="1.1"; sha256="0yqcsz5pdhqsrd86g0yx8bdac13fbmvg89phj3v4qvla2jfznjba"; depends=[]; }; nlstac = derive2 { name="nlstac"; version="0.1.0"; sha256="0ag9zzzcadgwa43j16ff30r7g8jfihkwi76shv43igp52a11jr72"; depends=[Deriv doParallel foreach stringr]; }; @@ -11907,39 +12380,43 @@ in with self; { nlt = derive2 { name="nlt"; version="2.2-1"; sha256="10wf00qzf28dxjfvv12wsqxlfn6xz15wk8njrzgsgm9px1g6s21f"; depends=[adlift EbayesThresh]; }; nltm = derive2 { name="nltm"; version="1.4.2"; sha256="02f3rn5l1hfvjpymy7vljmh6iq9w1w96016kx75qw563zwhmp5kx"; depends=[survival]; }; nlts = derive2 { name="nlts"; version="1.0-2"; sha256="0s49qjwavl9ns2746nn4zy4h4dh0njfcvznm3qd61qhs7np9w1db"; depends=[acepack locfit]; }; - nmaINLA = derive2 { name="nmaINLA"; version="0.2.0"; sha256="0z3iln81dj0sg64hi7dxypcslff5yl6nlx0hkra1kc24rhxfzhh2"; depends=[]; }; + nmaINLA = derive2 { name="nmaINLA"; version="1.0.0"; sha256="0m32yy1v1vq0zwl55q2lijjh38g7512fm1d3y8rzh3yvc0y7rr4c"; depends=[]; }; nmadb = derive2 { name="nmadb"; version="1.2.0"; sha256="17r5vc57ilhy6cfcqpfyp9nzzjaa5gc8qkgfn3y8sppqh1g1mi40"; depends=[devtools jsonlite RCurl readxl]; }; nmaplateplot = derive2 { name="nmaplateplot"; version="1.0.0"; sha256="00cs2c5qryd04y5qc0fb3pmv6fz017jvp3cbxacjy1rl93iyfpwh"; depends=[ggplot2]; }; nmathresh = derive2 { name="nmathresh"; version="0.1.6"; sha256="1jrf7k7an5y867k40aj28ib7vrjyqky2cslwzmfx28snp8ns1vd3"; depends=[ggplot2 gridExtra gtable Matrix nnls]; }; nmixgof = derive2 { name="nmixgof"; version="0.1.0"; sha256="0cbwrsxrcf8pn4ycn6r0z8jdidw5l6kdvwyrks69fq4pjzx988d6"; depends=[Rcpp unmarked]; }; + nmm = derive2 { name="nmm"; version="0.9"; sha256="00qij3vfpld6dzs6nzc43k1skxn8imdy41l4m42584fflwd1sfhj"; depends=[abind AER data_table DEoptim dplyr gsubfn Hmisc magrittr maxLik mlogit plyr Rdpack systemfit tidyr]; }; nmslibR = derive2 { name="nmslibR"; version="1.0.4"; sha256="1fw565n4128nswl2qx248ab60is98iqijq5blwskxc9hjddf95a4"; depends=[KernelKnn Matrix R6 Rcpp RcppArmadillo reticulate]; }; nmw = derive2 { name="nmw"; version="0.1.4"; sha256="1vj7b2p40x0h3xp45qzar86i9439mj8y3r5hnlbwa025jqdf2g0q"; depends=[numDeriv]; }; nnGarrote = derive2 { name="nnGarrote"; version="1.0.3"; sha256="0icnlqi6859q28gw7l7n75nlfkrf8cbxxn8lq031614hvvhgjs9k"; depends=[caret glmnet multicool]; }; nnTensor = derive2 { name="nnTensor"; version="1.0.5"; sha256="1zcf5ihggmhqcdnwbsqg5bxr86yyivy6zgqvfwg1jvpygk2bfqy0"; depends=[fields ggplot2 plot3D rTensor tagcloud]; }; nna = derive2 { name="nna"; version="0.0.2.1"; sha256="17cz1jf7iv61wspqldfdwbdjhlr0wq09idkzlivfb8aik5w9f0z5"; depends=[]; }; - nnet = derive2 { name="nnet"; version="7.3-14"; sha256="1bzl62p5awva5kxcncs6lrdrkqp9ljd993zia731ckfpcjbrw6sx"; depends=[]; }; + nnet = derive2 { name="nnet"; version="7.3-16"; sha256="0smmyx4vhlz99vy4w238y913gq74845v0l1p0g1kgydsp9lijlcr"; depends=[]; }; nnetpredint = derive2 { name="nnetpredint"; version="1.2"; sha256="1c6s9wm6vhylwv4xhp2hkllw18zj8hdr17ls9vlxm9qs3wx1v48w"; depends=[RSNNS]; }; nnfor = derive2 { name="nnfor"; version="0.9.6"; sha256="0bciy6k79g7abvj3pmmdc4wzg5mp11zgmdbx17x4by993p2clhw9"; depends=[forecast glmnet MASS neuralnet plotrix tsutils uroot]; }; - nngeo = derive2 { name="nngeo"; version="0.4.0"; sha256="08yrgdpxf47ag1c8jmvgg5gl8gz0glplrdn7h1bipwywbsqjl4yi"; depends=[lwgeom nabor s2 sf units]; }; + nngeo = derive2 { name="nngeo"; version="0.4.2"; sha256="05gbi1bhgcigr58f6sy8nj8ka7fzdajhs7i1jknrmp0v1jxjlbrd"; depends=[lwgeom nabor s2 sf units]; }; nnlasso = derive2 { name="nnlasso"; version="0.3"; sha256="1n7karlmgq61z9ywfx9xb5wvmxx40ydpnzzazj1xr70qlv5m0qk4"; depends=[]; }; - nnlib2Rcpp = derive2 { name="nnlib2Rcpp"; version="0.1.4"; sha256="0cg2sh0pvkfcmsp76c2biz84lqh4zrspshrvhlsxgziavhcmr4wc"; depends=[Rcpp]; }; + nnlib2Rcpp = derive2 { name="nnlib2Rcpp"; version="0.1.6"; sha256="0pm1y5crjyy251710vajbj50a0x3xng9yljn202sisidi7df1q2a"; depends=[Rcpp]; }; nnls = derive2 { name="nnls"; version="1.4"; sha256="07vcrrxvswrvfiha6f3ikn640yg0m2b4yd9lkmim1g0jmsmpfp8f"; depends=[]; }; nnt = derive2 { name="nnt"; version="0.1.4"; sha256="1rrqq8m3plsq13hsh53h948wbx37gl87hplj4ms2pxxf1zwqsmnj"; depends=[survival survRM2]; }; - nntrf = derive2 { name="nntrf"; version="0.1.3"; sha256="1b9610wy7s1gnvi9x34nm50ijkgfa98xfrdymww019gq2nib7q2g"; depends=[FNN NeuralNetTools nnet pracma]; }; - noaaoceans = derive2 { name="noaaoceans"; version="0.2.0"; sha256="1hvjkma14kl8f69ichk27ddxlg9cqnzif8x43ckxyny6h341bbkf"; depends=[httr jsonlite rvest xml2]; }; - noaastormevents = derive2 { name="noaastormevents"; version="0.1.1"; sha256="1ra852r5hw1ng3f4jk866jx0z2dszwvbidmfrdjchv9bfrjwmlmx"; depends=[choroplethr choroplethrMaps data_table dplyr forcats ggplot2 htmltab hurricaneexposure lubridate maps plyr RColorBrewer rlang stringr tidyr viridis XML]; }; - noctua = derive2 { name="noctua"; version="1.9.1"; sha256="0in6abza87z68ndlcci7gywfq1z4v5izd8vx0gbm5mgp8a7h828k"; depends=[data_table DBI paws uuid]; }; - nodbi = derive2 { name="nodbi"; version="0.4.0"; sha256="1jlqzj9lv9wnsb8hwy8y91369i6ykp8av35abakfpxg0302svay9"; depends=[data_table jsonlite]; }; + nntrf = derive2 { name="nntrf"; version="0.1.4"; sha256="1kasj861ln5q93wna1pk6sbjsssy3vpfzvk8jxd0drb17x3brpx8"; depends=[FNN NeuralNetTools nnet pracma]; }; + noaaoceans = derive2 { name="noaaoceans"; version="0.3.0"; sha256="0pxsddzkrprzjch173shhmd7c2h6rh5xzs3n5bbs97l51ni8m60m"; depends=[httr jsonlite rvest xml2]; }; + noaastormevents = derive2 { name="noaastormevents"; version="0.2.0"; sha256="1d93h8av0bbv7a56g6m000qpsnzqpfdla0fmcj5y8fbbqkipxnfr"; depends=[choroplethr choroplethrMaps data_table dplyr forcats ggplot2 hurricaneexposure lubridate magrittr maps plyr RColorBrewer RCurl rlang stringr tibble tidyr viridis XML]; }; + noah = derive2 { name="noah"; version="0.1.0"; sha256="1ln23lp4c70fin9sjjhm4ngy47f8sk2mcljp5q449b7hq8gqi12c"; depends=[assertthat crayon digest dplyr hash magrittr purrr R6 rlang stringr]; }; + noctua = derive2 { name="noctua"; version="2.0.1"; sha256="01xw3as0lg2z16x9jb4vldwp1jqfqbdmb2khyi7s5agai9lbiz1d"; depends=[data_table DBI paws uuid]; }; + nodbi = derive2 { name="nodbi"; version="0.4.2"; sha256="0akaml8liwmq5g57rf11ljckjv4hf3jaaknarkjrnilhi1zs0iy2"; depends=[data_table jsonlite]; }; + node2vec = derive2 { name="node2vec"; version="0.1.0"; sha256="03gfpn4xgmdwlrpwi9pdpnh6k75mwp85j6vywkj0jsxhz3rbg95g"; depends=[data_table dplyr igraph rlist vctrs vegan word2vec]; }; nodeHarvest = derive2 { name="nodeHarvest"; version="0.7-3"; sha256="0nh3g50rk9qzrarpf29kijwkz9v60682i0ag77j2ipyvhhbpwpkc"; depends=[quadprog randomForest]; }; nodiv = derive2 { name="nodiv"; version="1.4.0"; sha256="1k7pr9d1mgxw3szxcmnkkz498x7629wf2z65qlclywka3xgzpkxc"; depends=[ape picante raster sp vegan]; }; - nofrills = derive2 { name="nofrills"; version="0.3.0"; sha256="18hryq6clywlr2f45az6ryslkkarly45nacln4bwk6ip0yfl5s98"; depends=[rlang]; }; + nofrills = derive2 { name="nofrills"; version="0.3.1"; sha256="0302q1c82k0ryadasl3x8zvpfsh8c2smjyi2g4vaxf9gbnvl5sc0"; depends=[rlang]; }; noia = derive2 { name="noia"; version="0.97.1"; sha256="0yldfmnb4ads4s9v9cj1js8zf1w1hxasqq6qjyzwknmvmp7kh62h"; depends=[]; }; - noise = derive2 { name="noise"; version="1.0"; sha256="1a48s9vpz3nc058966lad8hydmg7z0vbzfwcf6nxc9g3c8mw4nig"; depends=[preprocessCore]; }; + noise = derive2 { name="noise"; version="1.0.1"; sha256="0xqcg79v03d5x783pby6gqxrhylm67xk4ic9ib4jmjyrrbqklad1"; depends=[preprocessCore]; }; noisyCE2 = derive2 { name="noisyCE2"; version="1.1.0"; sha256="02zkkyys9qknwm39gz4j4pvlvkd5qlvxqaprklzsd40dgz39cwq4"; depends=[magrittr]; }; noisySBM = derive2 { name="noisySBM"; version="0.1.4"; sha256="1zdkxr48kvpqs49figxxznq3d45nalja92lyal71m066s1blc6dg"; depends=[ggplot2 gtools RColorBrewer]; }; + noisyr = derive2 { name="noisyr"; version="1.0.0"; sha256="05nvxz5qa4lsi62va74yq4m68nlacjkl8xj5nsq7dik3357y53dr"; depends=[doParallel dplyr foreach GenomicRanges ggplot2 IRanges magrittr philentropy preprocessCore Rsamtools tibble]; }; nombre = derive2 { name="nombre"; version="0.3.0"; sha256="0ssi0xk3f327zs7zvyhcm20v537y6ikjnfjarjsz22dvn05dblma"; depends=[fracture pkgconfig]; }; nomclust = derive2 { name="nomclust"; version="2.2.1"; sha256="1034j5y7dppm4xkap1h3ywl77fz3dsm3g15njjgzcszr3p0z4vxn"; depends=[cluster plyr]; }; - nomisr = derive2 { name="nomisr"; version="0.4.3"; sha256="0p1vc6qzs7lyflw9jndimylv614dny27nz18xkmay2419vwh463f"; depends=[dplyr httr jsonlite readr rlang rsdmx snakecase tibble]; }; + nomisr = derive2 { name="nomisr"; version="0.4.4"; sha256="1qa7k4fh7n2imf91nfcdg32dacraay343jv9sczs6qc37nadhdbg"; depends=[dplyr httr jsonlite readr rlang rsdmx snakecase tibble]; }; nomnoml = derive2 { name="nomnoml"; version="0.2.3"; sha256="08zraip0v4jc51zv2zsvka6k8d1ry2ac9d70xpavfggbgmrmz987"; depends=[htmlwidgets lifecycle png rlang webshot]; }; nomogramEx = derive2 { name="nomogramEx"; version="3.0"; sha256="16235rwblnzn8k53817llwy2pzhnpifh6ij159nxymjm8ar9qpbp"; depends=[pracma rms]; }; nomogramFormula = derive2 { name="nomogramFormula"; version="1.2.0.0"; sha256="1j6g5kndl0n2g8acwq8pn09sk0bjcsphbcd77ha1j5dnwdmy73c0"; depends=[do Hmisc rms]; }; @@ -11948,7 +12425,7 @@ in with self; { nonet = derive2 { name="nonet"; version="0.4.0"; sha256="1043vplj8libbzll172h82dfwnz2lsdba5na2g9liryg8p08h4v8"; depends=[caret dplyr e1071 ggplot2 glmnet pROC purrr randomForest rlang rlist tidyverse]; }; nonlinearICP = derive2 { name="nonlinearICP"; version="0.1.2.1"; sha256="1m9a1f0yrbjl0nx2l7r76pyi78b2bxj8v4jx92yga91f975mw6np"; depends=[caTools CondIndTests data_tree randomForest]; }; nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.10"; sha256="1zhp06az5pz7133253h18wwy77vpky4g0gi636v42p9dh0dzzvbm"; depends=[Matrix Rcpp RcppArmadillo rgl tseries zoo]; }; - nonmem2R = derive2 { name="nonmem2R"; version="0.2.2"; sha256="07ycldcbjap1ay9msmlf9jz4sk1p02di108zsz5x45yxd3fb6r93"; depends=[ggplot2 gridExtra lattice latticeExtra MASS mvtnorm reshape2 splines2]; }; + nonmem2R = derive2 { name="nonmem2R"; version="0.2.3"; sha256="1x8mq0wwzn3px41pjbzwmpd8wjfq581lwq4nkiva7pf1xzjpk923"; depends=[ggplot2 gridExtra lattice latticeExtra MASS mvtnorm reshape2 splines2]; }; nonmemica = derive2 { name="nonmemica"; version="0.9.7"; sha256="12760lvbifzakzq7wjzqavqicrp2pzyq333glmafm9v73lx97pa7"; depends=[csv dplyr encode lazyeval magrittr metaplot rlang spec tidyr xml2]; }; nonneg_cg = derive2 { name="nonneg.cg"; version="0.1.6"; sha256="15361k0kjy1465s8pr9jb5jy22mibi37zcnza7mbfh5l66hr29kh"; depends=[Rcpp]; }; nonnest2 = derive2 { name="nonnest2"; version="0.5-5"; sha256="1ddaqwx8i3ygwvxf11mc8xhgk4nkvnail99nr5szq8i168752zq2"; depends=[CompQuadForm lavaan mvtnorm sandwich]; }; @@ -11962,6 +12439,7 @@ in with self; { nord = derive2 { name="nord"; version="1.0.0"; sha256="1gisqca85vzbqq5hs5bgqjgrjyksxj176x97kv9vv6mwll8kijl9"; depends=[ggplot2]; }; nordklimdata1 = derive2 { name="nordklimdata1"; version="1.2"; sha256="0c2hbh3qy8nrs275lxpzfgqsfgwp81m4kv0layvnjj09fcybm54x"; depends=[]; }; norm = derive2 { name="norm"; version="1.0-9.5"; sha256="01j1h412yfjx5r4dd0w8rhlf55997spgb6zd6pawy19rgw0byp1h"; depends=[]; }; + norm2 = derive2 { name="norm2"; version="2.0.4"; sha256="0ahz6x59k00pqalzjc3ajiby1ysmarjssga9amwh9vd6vmzzyfb7"; depends=[]; }; normalp = derive2 { name="normalp"; version="0.7.2"; sha256="0fqpz6v9v3xjmyh7mh2yvkjdn3v4d0nk93x7s0gj28kazl7137kz"; depends=[]; }; normalr = derive2 { name="normalr"; version="1.0.0"; sha256="1ahrg188vbhnrnwag0zi6lcb3g0y1mbz06sl3j1wyllq5l918cc7"; depends=[magrittr MASS purrr rlang shiny]; }; normtest = derive2 { name="normtest"; version="1.1"; sha256="073r2mwfs6c4vqh8921nlyygl0f20nhv997s0iwf00d3jckkc4pp"; depends=[]; }; @@ -11975,6 +12453,7 @@ in with self; { not = derive2 { name="not"; version="1.2"; sha256="1671j3yirzdyhb02khx1yddslyig5jlnb0bdbgdlkb21n4zwaqa4"; depends=[]; }; notifyR = derive2 { name="notifyR"; version="1.02"; sha256="0jx76ic5r1crcgg0n0yqnka0gwniflfxakh838a98j9wb11wi6h5"; depends=[RCurl rjson]; }; notifyme = derive2 { name="notifyme"; version="0.3.0"; sha256="0b6xrv6c4id7rs0dafg96pl4brn4yma5xh9wjz78ql44bg3w5s91"; depends=[dplyr httr magrittr]; }; + novelforestSG = derive2 { name="novelforestSG"; version="1.2.1"; sha256="17gn4qc5f3n0gdmm0r1zlg6jlzd3n5d8a3fx6fynxnj8ncq604i7"; depends=[]; }; nowcasting = derive2 { name="nowcasting"; version="1.1.4"; sha256="1nj34cbkv1xlhmcfhxs32shv00mz02rp95xj59qkq5by53sx8qwq"; depends=[corpcor DBI httr lubridate magic matlab Matrix RCurl RMySQL vars xts zoo]; }; noweb = derive2 { name="noweb"; version="1.1-2"; sha256="1h0v92l5jzgiy5rz33pan1l6rb3mykckmvn5c8jm3hhph6ipgqad"; depends=[]; }; np = derive2 { name="np"; version="0.60-10"; sha256="06h8k0kdv5s258jr6s08fabvlycrbs7iq34jk2f2hfmqm2y4nyx2"; depends=[boot cubature quadprog quantreg]; }; @@ -11990,6 +12469,7 @@ in with self; { npcopTest = derive2 { name="npcopTest"; version="1.03"; sha256="1kpa3avi95aa93y038f4zqhhdp8vdscdk0c6397qmqjg34hf1dnr"; depends=[]; }; npcp = derive2 { name="npcp"; version="0.2-2"; sha256="187vz2nvv7352qv9nry96rcjf0w4zi19xhpbg0jljbqqjfn7abi5"; depends=[]; }; npcure = derive2 { name="npcure"; version="0.1-5"; sha256="0hf6w8w76qmjdsd6zgg85jj5ypmmg1a1ryzqwnxcypsdjxaq539z"; depends=[permute zoo]; }; + npde = derive2 { name="npde"; version="3.1"; sha256="1xq38v8c32hq8n2d037s7ydbvjw5gvlmm234pijjajhdwkxn5k0a"; depends=[ggplot2 gridExtra mclust rlang scales]; }; nph = derive2 { name="nph"; version="2.0"; sha256="037vh3x3zlgg7jcbbwvcrlhm38d17zgz0m6d54y84mcclzzyc746"; depends=[ggplot2 mvtnorm]; }; nplplot = derive2 { name="nplplot"; version="4.5"; sha256="1dpbs0jb34gv0zj528357z1j2pwahjbp04rm7jir6qk0jhyaxxgh"; depends=[]; }; nplr = derive2 { name="nplr"; version="0.1-7"; sha256="1h3qv9dlw2gx8km3slyvrl588nif1n87df8xwmm6p75ziqhn2f56"; depends=[]; }; @@ -12000,27 +12480,27 @@ in with self; { npordtests = derive2 { name="npordtests"; version="1.2"; sha256="1axzcyy45h3rs67m0i3cvwbmza1mnmraxan9j4zlpxdd5x9nz4h8"; depends=[]; }; nppbib = derive2 { name="nppbib"; version="1.2-0"; sha256="1nn6wf89jhr3gy4rcd6px0cd5b1bsr7pbaxng4adba8n3yrss7vs"; depends=[]; }; npphen = derive2 { name="npphen"; version="1.1-0"; sha256="0pbf9sqdapl5q09g1hj5hi4j2wigrd0b6s0gbv1gx4wn68alrals"; depends=[ks lubridate raster rgdal rts snow]; }; - nprcgenekeepr = derive2 { name="nprcgenekeepr"; version="1.0.3"; sha256="148fq935x7dmw754qgkkgka5hd2xdmh2cn1d5g2azzgx974zndzv"; depends=[anytime futile_logger htmlTable lubridate Matrix plotrix readxl Rlabkey shiny shinyBS stringi WriteXLS]; }; - npreg = derive2 { name="npreg"; version="1.0-5"; sha256="1ddr3iapx1zzl72bygjy3gf50cr8pkf1ap5hzr5ci4rg4bmdjznw"; depends=[]; }; + nprcgenekeepr = derive2 { name="nprcgenekeepr"; version="1.0.5"; sha256="1j6pfc694yf1m42a0fhlbh5wdbmgs61fswbw7083h69d2sr2zq05"; depends=[anytime futile_logger htmlTable lubridate Matrix plotrix readxl Rlabkey rlang shiny stringi WriteXLS]; }; + npreg = derive2 { name="npreg"; version="1.0-6"; sha256="0a28hj4a8j46zyh483y4b5abwy18yl648rf99nj8a2blhdmipyla"; depends=[]; }; npregderiv = derive2 { name="npregderiv"; version="1.0"; sha256="1k873cs3rs15l13z8017n4anacandx7di6yk1zlamcc5p3vlh59n"; depends=[]; }; npregfast = derive2 { name="npregfast"; version="1.5.1"; sha256="0s9ci3nybzwykrgi9z2rqp6l15mqbxf759ks0clvkbm7wxv3whk5"; depends=[doParallel foreach ggplot2 mgcv sfsmisc shiny shinyjs wesanderson]; }; nprobust = derive2 { name="nprobust"; version="0.4.0"; sha256="1vry64r3xms6xls6bqq918prjyhs5svhl2yjvq0jxycaaqw2sgyp"; depends=[ggplot2 Rcpp RcppArmadillo]; }; nproc = derive2 { name="nproc"; version="2.1.5"; sha256="1p5wjz0rafg27fsl48l9pmki3px1k0pav3ignz4swik5i1nhnc8w"; depends=[ada e1071 glmnet MASS naivebayes randomForest ROCR tree]; }; - nprotreg = derive2 { name="nprotreg"; version="1.0.1"; sha256="1bjrnbfzs7h3q424d1kxlvb29ppnxf0dw7hsx2gn5bygz1zgm54h"; depends=[]; }; + nprotreg = derive2 { name="nprotreg"; version="1.1.0"; sha256="0krzfxy4nlzwd9dgfk9wds3h7yhdsfyh4mw28kvp39xsj7qrp186"; depends=[foreach]; }; npsf = derive2 { name="npsf"; version="0.8.0"; sha256="011y8k3sdhhgzf4yn0wdxx55yv4kdpgyhj0bbm6krjdpphnr9557"; depends=[Formula Rcpp]; }; npsr = derive2 { name="npsr"; version="0.1.1"; sha256="1fzvilzjg9z05991sr1s1bdp17kfl6d1580qdllk8is9ac06np0v"; depends=[gmp infotheo MASS]; }; npst = derive2 { name="npst"; version="2.0"; sha256="1y5ij3nmh9pj6p97jpx75g26sk508mznr0l67cwj381zfb77hj1n"; depends=[]; }; npsurv = derive2 { name="npsurv"; version="0.5-0"; sha256="1ihxhb42cga1hssj2jv4ah0f4hlwsky899ij5261fzh1wxvdp1xw"; depends=[lsei]; }; npsurvSS = derive2 { name="npsurvSS"; version="1.0.1"; sha256="0k9xvxii5527vynf7yy50j7z4jhxgk5ydhdcaaygm9ynx5yq14ip"; depends=[]; }; - nptest = derive2 { name="nptest"; version="1.0-2"; sha256="1h1bmv7yj2nzwivk1z11a67z3xkamh0ljfr0nlimyr6qx32hr5s9"; depends=[]; }; + nptest = derive2 { name="nptest"; version="1.0-3"; sha256="1s6j4hs3m5pyh5ajy85gcclgb3l3ily92r4ak7wl5mn6vsnn6rvc"; depends=[]; }; nricens = derive2 { name="nricens"; version="1.6"; sha256="0fpgp6k3mhb0qxbx6248k9bscnmlzwj70mqh631a1nc4cpdjvw3q"; depends=[survival]; }; nsRFA = derive2 { name="nsRFA"; version="0.7-15"; sha256="004dm143v032b80knpz7pj3z71lci7vgd6hz1zz22rpfg27ghgdd"; depends=[]; }; nsROC = derive2 { name="nsROC"; version="1.1"; sha256="1fi7k61fja98kpn528jprjdycwz01rnqm368m82anxh21k7q4s1m"; depends=[sde survival]; }; nsapi = derive2 { name="nsapi"; version="0.1.1"; sha256="06xf2p6f911vwpzky47r35fjgjvlhp13p9pf1zlvjrv66kdw8vbp"; depends=[crul xml2]; }; nsarfima = derive2 { name="nsarfima"; version="0.2.0.0"; sha256="0sv63anrsh0ajfvvkb44zsvc7sxws3xpsgwxqa951gy98w8h58g5"; depends=[]; }; nscancor = derive2 { name="nscancor"; version="0.6.1-25"; sha256="183kvzlln5lhmi51dm0skq1165c3hhy1yz5h2g7nxwqk2b4p23xj"; depends=[]; }; - nse = derive2 { name="nse"; version="1.19"; sha256="107ri9325ga4kgvs5a3j3698dc3m4v28cb02ypc4dan6f3fa9h8i"; depends=[coda mcmc mcmcse np Rcpp sandwich]; }; - nse2r = derive2 { name="nse2r"; version="0.1.3"; sha256="18zchh830b546lmy64l94l4lq89bk6jb49x2asw9f07i60plbwyi"; depends=[jsonlite magrittr rvest xml2]; }; + nse = derive2 { name="nse"; version="1.20"; sha256="037z164m78hdbwgnaa10jq50ngg3n9iigmyd1r5gz6hgvsr5sbnf"; depends=[coda mcmc mcmcse np Rcpp sandwich]; }; + nse2r = derive2 { name="nse2r"; version="0.1.4"; sha256="10gia98p15js3a9qdg98dv43w0s1a3nhwm0m6i1s6kaljbq09pqn"; depends=[httr jsonlite magrittr rvest xml2]; }; nseval = derive2 { name="nseval"; version="0.4"; sha256="18avir5zllvm2sbi9616k7dlb8yxhvnbji7xshr4kcfvy1fvn2ia"; depends=[]; }; nsga2R = derive2 { name="nsga2R"; version="1.0"; sha256="04jj0a3isfc348vg46il5x9l33cr7xawz5w0mm4pwr6djhd8nfhx"; depends=[mco]; }; nsga3 = derive2 { name="nsga3"; version="0.0.3"; sha256="1jv3kw22jw24n7lnwhq3857mygr2yfv8c5xp3lbqqgz5840cdfa1"; depends=[mlr parallelMap rPref xgboost]; }; @@ -12035,15 +12515,16 @@ in with self; { numGen = derive2 { name="numGen"; version="0.1.1"; sha256="1y41wq31r8126dz1sj23smq2k6v9yqczq4ddgzqb73dsrx9dmmc0"; depends=[]; }; numKM = derive2 { name="numKM"; version="0.2.0"; sha256="0g5jw12fmfc6nl6a3ghpslkjd2d7pbihl70sks35r7dalmr6ihzk"; depends=[survival]; }; numOSL = derive2 { name="numOSL"; version="2.6"; sha256="03h1p56650x4my5vq5jlmjsz5xj0w2j75qfr08rh7nr38dwgp1k8"; depends=[]; }; - numbers = derive2 { name="numbers"; version="0.7-5"; sha256="1dz23rmjzdns4av28kk8bc9psj71q2bpcgm1m7sxnyzcxpm8hczc"; depends=[]; }; + numbers = derive2 { name="numbers"; version="0.8-1"; sha256="00rfdmh86wb7ppnx2iyijway48z10840pxjwdmwdifvcmwavy6kk"; depends=[]; }; numbersBR = derive2 { name="numbersBR"; version="0.0.2"; sha256="0ihxlny745gpz1ngq862rydn1zwn8zni1xw9mmgw8hkylsrnjfq8"; depends=[stringr]; }; numform = derive2 { name="numform"; version="0.6.4"; sha256="034dmrhp3d0r4hspy8490wjpknc83dsiyjhl3nha0b4w8vbcalsz"; depends=[glue]; }; nutriNetwork = derive2 { name="nutriNetwork"; version="0.1.1"; sha256="0ya95h88jkiwc7cg7ic8bmyd7b0lgnhxrywwqvi2j6m6nbvvaxzy"; depends=[glasso huge igraph Matrix tmvtnorm]; }; nvctr = derive2 { name="nvctr"; version="0.1.4"; sha256="1r7q9snr9ya1586fwbyvnk8rlb9yikl4yp3bn9kni0sw820npk1d"; depends=[magrittr pracma]; }; nvmix = derive2 { name="nvmix"; version="0.0-5"; sha256="15nipvfb92r1dx4shvix8hhjg0mzvrwprgzgdzkdmhvxk9d8rswd"; depends=[copula Matrix pcaPP qrng]; }; nws = derive2 { name="nws"; version="1.7.0.1"; sha256="1fn92n6brjhh8hpvhax7211cphx2cn0rl99kjqksig6z7242c316"; depends=[]; }; - nycflights13 = derive2 { name="nycflights13"; version="1.0.1"; sha256="0h4jzg4q5qpvjp5b2wlk3a2mh0jhyz9c1acdjcmg70pap7fyh0fj"; depends=[tibble]; }; + nycflights13 = derive2 { name="nycflights13"; version="1.0.2"; sha256="07aa76c77pm1wpzkwjmzv8n6ir5i6fxawx8wx586gwc5wajcb1qf"; depends=[tibble]; }; nzelect = derive2 { name="nzelect"; version="0.4.0"; sha256="19kcbq454yg9g76ix7v3nibgw2203d7vv6f2d6d2zkcc0h08bjm7"; depends=[]; }; + nzffdr = derive2 { name="nzffdr"; version="1.0.0"; sha256="1r7pdv3jrkwnncyq61nb8js9y3kmxlg3d2cvb8b3i9fchx4059z6"; depends=[chron curl httr jsonlite stringr xml2]; }; nzilbb_labbcat = derive2 { name="nzilbb.labbcat"; version="0.6-3"; sha256="19ys3l40xmqmkhhpq3l7hz8ni4wqn1j8h23hqic8r1arf4ci9b89"; depends=[httr jsonlite rstudioapi stringr]; }; nzpullover = derive2 { name="nzpullover"; version="0.3.0"; sha256="0b3mz5i58m48fa1x7gv4l3gqj0gvrar201ph2l1gkbcnfmazwjp8"; depends=[]; }; o2geosocial = derive2 { name="o2geosocial"; version="1.0.1"; sha256="1q4y606cpyfjik56zw019xscrshm4s9n0y0g37izmd02cv17a4ik"; depends=[data_table geosphere ggplot2 outbreaker2 Rcpp visNetwork]; }; @@ -12065,10 +12546,10 @@ in with self; { observer = derive2 { name="observer"; version="0.1.2"; sha256="1027827k57qb4xppx0xxxffd1s3n7pz754irdx3v1v3piix8xi8m"; depends=[bazar bit dplyr lazyeval magrittr tibble]; }; oc = derive2 { name="oc"; version="1.2"; sha256="0cw1gvz6gk8j718zmywqp03h9cnzn132nwbv45gr00xg2s9h7dk7"; depends=[pscl]; }; occ = derive2 { name="occ"; version="1.1"; sha256="1aka29qqwbd494kvi15yyyqkb9hks4ky2gcvykxhx2drm2fnsn4g"; depends=[]; }; - occCite = derive2 { name="occCite"; version="0.4.5"; sha256="1409mzhkgw9m6nfdj3q7cz95js3db1whad8ns2pkwmg5i9nl8h4n"; depends=[ape bib2df BIEN bit64 DBI dplyr ggplot2 htmltools knitr leaflet lubridate magrittr rgbif rlang RPostgreSQL stringr taxize tidyr waffle]; }; + occCite = derive2 { name="occCite"; version="0.4.7"; sha256="0zsrkwzzd4rcgy7s6wiihf26pvlnvcbqh124cm90fdgpd2q84nhm"; depends=[bib2df BIEN bit64 DBI dplyr ggplot2 htmltools leaflet lubridate RColorBrewer rgbif rlang RPostgreSQL stringr taxize tidyr viridis waffle]; }; ocd = derive2 { name="ocd"; version="1.1"; sha256="06pyc352pvn85k76z9797gwk0ksbb3snvh6krysp68k3lcygq872"; depends=[]; }; - oce = derive2 { name="oce"; version="1.2-0"; sha256="18ls8c8ia00dn9f9lxk01mvwqmxd1ilx1d7y59d1nixd40mjy1wr"; depends=[gsw Rcpp testthat]; }; - oceanis = derive2 { name="oceanis"; version="1.7.5"; sha256="1mb9jrrgbkawiwa20xqy7im56gjcn0nmq4vi9mnrzrgizfid25dx"; depends=[classInt dplyr DT ggplot2 leaflet leaflet_extras lwgeom mapview sf shiny shinyBS shinyjs shinythemes stringr units]; }; + oce = derive2 { name="oce"; version="1.4-0"; sha256="0224fgd51fchn8apdi6x0n3ycl6zdbwch9janmidqr0i01418d1v"; depends=[gsw Rcpp sf testthat]; }; + oceanis = derive2 { name="oceanis"; version="1.7.5.2"; sha256="1ng6qlsbybnv77lbqhmzvi93ydiy99zbcgl3yszrqwnw0ld08k9j"; depends=[classInt dplyr DT ggplot2 leaflet leaflet_extras lwgeom mapview sf shiny shinyBS shinyjs shinythemes stringr units]; }; oceanmap = derive2 { name="oceanmap"; version="0.1.1"; sha256="06h4yxqcn3rjr3m2n82w128z110a4k5rg6msrbd0gcqksxc4vd2v"; depends=[abind extrafont fields lubridate mapdata maps maptools ncdf4 plotrix raster sp]; }; oceanwaves = derive2 { name="oceanwaves"; version="0.1.0"; sha256="0izgnqjji3xrvv8xbpsdbrx53wdb3rg3045xx6gcknfl2fj5iky7"; depends=[bspec ggplot2 signal]; }; ocedata = derive2 { name="ocedata"; version="0.1.8"; sha256="01m2pflk3zgqbqmv34w7mh8bs1lbpagdmhvhzji2j6p1fysvhqr1"; depends=[testthat]; }; @@ -12077,10 +12558,10 @@ in with self; { ocomposition = derive2 { name="ocomposition"; version="1.1"; sha256="0fk8ia95yjlvyvmjw7qg72piqa40kcqq9wlb3flc6a81pys1ycb5"; depends=[bayesm coda]; }; ocp = derive2 { name="ocp"; version="0.1.1"; sha256="0q52s8j3z3xwnma3sxx6019qxid66bf0a43w4g8xjagplwps57dx"; depends=[]; }; ocs4R = derive2 { name="ocs4R"; version="0.1"; sha256="1sm2fl503ky4pxv9873zykidb56f7dygq1xckjsh0d7m78n4gzx5"; depends=[curl httr jsonlite openssl R6 XML]; }; - od = derive2 { name="od"; version="0.0.1"; sha256="1w65jynv28vfbgp4ln6mrhgymis2098mcfy6mpax3sx4a5s7yyaq"; depends=[sfheaders]; }; - odbc = derive2 { name="odbc"; version="1.3.0"; sha256="1m2ljaw44gl78i34c52jiyzzskqak9p5zddai5ijjfc2afkvldfg"; depends=[bit64 blob DBI hms Rcpp rlang]; }; + od = derive2 { name="od"; version="0.2.1"; sha256="0cp38hvx55pr5acqjz2f08rih40a2rr3w8bz9qs76zib9ii5lx70"; depends=[sfheaders]; }; + odbc = derive2 { name="odbc"; version="1.3.2"; sha256="1s1fbnkg6xlch94w5vwfwa9pa0rc722jbzckhkbl9m80z93hj4pm"; depends=[bit64 blob DBI hms Rcpp rlang]; }; odds_converter = derive2 { name="odds.converter"; version="1.4.8"; sha256="09s8pg55gpsxmrbimzg5rsr1n07la93781sar6vab5p9zn9zxgx4"; depends=[]; }; - odds_n_ends = derive2 { name="odds.n.ends"; version="0.1.1"; sha256="0kgdv4m14h4a16b0k2s2qjyjn0kxk5sf4qkbi6ikm6kqdh5ashp4"; depends=[MASS]; }; + odds_n_ends = derive2 { name="odds.n.ends"; version="0.1.3"; sha256="18ad9qkq3mqdahn1hwy3nxx2kav1y6aa3yc1bj5mh0grl8fd57s7"; depends=[MASS]; }; oddsratio = derive2 { name="oddsratio"; version="2.0.1"; sha256="1db0pxi5j18rvi8dyc2xx1im3l269775vpjjavapjcv2pylfg5r0"; depends=[ggplot2 mgcv]; }; oddstream = derive2 { name="oddstream"; version="0.5.0"; sha256="1nwjw7fq6b4jdq4m2w0a7xgmzjg5a6pbma1d3r9msiz8rnhb0c54"; depends=[dplyr ggplot2 kernlab ks magrittr MASS mgcv moments mvtsplot pcaPP RColorBrewer RcppRoll reshape tibble tidyr]; }; odeintr = derive2 { name="odeintr"; version="1.7.1"; sha256="0wfb5lgv10p0qyfbn9hdg14bda37v43lpgbwv6nbw63zzbsbazqi"; depends=[BH Rcpp]; }; @@ -12089,10 +12570,10 @@ in with self; { odpc = derive2 { name="odpc"; version="2.0.4"; sha256="1525apa5x4jqf8ijdc9xl60fgxsi5xsirhd35cmnc362sd7k2jjd"; depends=[doParallel foreach forecast MASS Rcpp RcppArmadillo]; }; odr = derive2 { name="odr"; version="1.0.2"; sha256="0dj5piyd6h92q6agv8yvzky3qpxjn6zpgvf502hf0n6k9gx6kdpl"; depends=[]; }; oem = derive2 { name="oem"; version="2.0.10"; sha256="1nf9ja4l7b9gnnvv216dz9siy02432qgyg930vcrqq3l8g05r6zc"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; }; - oenb = derive2 { name="oenb"; version="0.0.1"; sha256="1x1jlqp6r27c4gb7wafzpmh5rq6yq61a2d395r5lsmv2g5jb4biz"; depends=[dplyr XML]; }; + oenb = derive2 { name="oenb"; version="0.0.2"; sha256="1jgxw7ycx2lcdzglg9nix8k08fs4r6i5jdsjzrd6w1dg6smsinl5"; depends=[dplyr XML]; }; ofGEM = derive2 { name="ofGEM"; version="1.0"; sha256="0xdkl8k12an9pdy6i5nay4m2iakrwsp0lr3zl8gphii75j0ywz7k"; depends=[CompQuadForm forestplot MASS]; }; - officedown = derive2 { name="officedown"; version="0.2.0"; sha256="0v7bhcgfk8xra3w9fjrcm7vra2hjq9wm1wj2mbsa3xdknicv9yrs"; depends=[knitr memoise officer rlang rmarkdown rvg uuid xml2 yaml]; }; - officer = derive2 { name="officer"; version="0.3.15"; sha256="1s9hrkdx105c1plpxywv68bmp8hvvxbdizhwx81fxr79fhj62x5j"; depends=[magrittr R6 uuid xml2 zip]; }; + officedown = derive2 { name="officedown"; version="0.2.2"; sha256="0xbkdgl14nmhl110xxvsxm3zi4120v1fhhb9gb5q3ba6wd5n245g"; depends=[knitr memoise officer rlang rmarkdown rvg uuid xml2 yaml]; }; + officer = derive2 { name="officer"; version="0.3.18"; sha256="1j3bv4j8x5ijj0j447vpdsk4p8pl3ncwdwnns6n3plfrqgsf3vsg"; depends=[R6 uuid xml2 zip]; }; offlineChange = derive2 { name="offlineChange"; version="0.0.4"; sha256="005afrm4ki4zz3zkgrf8c1v9gf5cjhc5g50mjkqya3r8npaccwq2"; depends=[Rcpp]; }; oglmx = derive2 { name="oglmx"; version="3.0.0.0"; sha256="13axmhbqhv4kkcdsdmp9r7p0d0kyqlsaqgyyllbkxlxb4hfz79b6"; depends=[maxLik]; }; ohenery = derive2 { name="ohenery"; version="0.1.1"; sha256="0i7cc110c30y7dm86srh2xkikkmlr28mvy0kkjxywxmiwnrsmzjq"; depends=[dplyr magrittr maxLik Rcpp]; }; @@ -12111,68 +12592,77 @@ in with self; { omopr = derive2 { name="omopr"; version="0.2"; sha256="1ng94jnarj7pszxzvdlnrr2dbcvv5p5yrscjw6ihqkskpraw9f7w"; depends=[DBI dbplyr dplyr RSQLite]; }; ompr = derive2 { name="ompr"; version="0.8.1"; sha256="10q6p1j7y22w82b73806ixcwvmpf5cffn1d84p7zqlgxcj6sk24w"; depends=[data_table lazyeval Matrix progress Rcpp rlang]; }; ompr_roi = derive2 { name="ompr.roi"; version="0.8.0"; sha256="1cbrchvpd31lxpxvw2l3q9k5jmffarb1shca8kwm76y5a6zxxq63"; depends=[Matrix ompr ROI slam]; }; + omsvg = derive2 { name="omsvg"; version="0.1.0"; sha256="018sphpmmgpq5alag0il83q51f3r3jx3pnnzjrvg4gn6691nkwvz"; depends=[dplyr gt htmltools magrittr rlang sass xml2]; }; omu = derive2 { name="omu"; version="1.0.4"; sha256="03dvbgxf5d181wka0gpf3sr008fzzva57xvdniynbgqskgcn4qi3"; depends=[dplyr ggfortify ggplot2 KEGGREST magrittr plyr reshape2 stringr tidyr]; }; + onbabynames = derive2 { name="onbabynames"; version="0.0.1"; sha256="13sp9gnqnsx2b8dq13qnkin813clnanh6hzv3vi7bxy514pvmisj"; depends=[tibble]; }; oncomodel = derive2 { name="oncomodel"; version="1.0"; sha256="1jyyq9znffiv7rg26mjldbwc5yi2f4f8npsd2ykhxyacb3g96fp1"; depends=[ade4]; }; oncrawlR = derive2 { name="oncrawlR"; version="0.2.0"; sha256="0cm26diaf3jlzfrpgh13q0hakakmj6vy41wk9z0w81az4jcg9sn9"; depends=[caret DALEX dplyr e1071 formattable fs ggplot2 htmltools jsonlite pdp pROC RCurl readr rjson rlang rlist scales sparkline tidyr webshot xgboost]; }; + ondisc = derive2 { name="ondisc"; version="1.0.0"; sha256="071jrldclkaz5lfp3k5fh1ilpgvvcnakh2vvnr69n3pri9dl3fls"; depends=[crayon data_table dplyr magrittr Matrix Rcpp readr rhdf5 Rhdf5lib]; }; oneclust = derive2 { name="oneclust"; version="0.2.1"; sha256="04nafy0bv3g5vjd5k7858lvs9rc141kzpblsdcb7sl4kfw76s11z"; depends=[magrittr Rcpp]; }; onehot = derive2 { name="onehot"; version="0.1.1"; sha256="1cdsz007wr054k5phvihhg4qx0fc039k2s6484m92kws8mb2ziix"; depends=[]; }; onelogin = derive2 { name="onelogin"; version="0.2.0"; sha256="06p3a8kaxmvsj8nn7dy8w6wv1jjw67is991hqg9q0fa20ifym3dl"; depends=[glue jsonlite magrittr R6 safer tibble]; }; onemap = derive2 { name="onemap"; version="2.1.3"; sha256="0fwkr845zz0j8ccrwpksb28lly1rsgj3603ak1aqqgmlx6481p08"; depends=[ggplot2 MDSMap plotly Rcpp reshape2]; }; onemapsgapi = derive2 { name="onemapsgapi"; version="1.0.0"; sha256="11w3xkjxhjf0b78hfjxjk650giswaf1js471backz4pcb97gaigl"; depends=[dplyr furrr future httr purrr rlang stringr tidyr]; }; - onewaytests = derive2 { name="onewaytests"; version="2.4"; sha256="1rsamf6mwpah02zwpv270sn17aaav0c030wlsv90k2awmkms2ka6"; depends=[car ggplot2 moments nortest]; }; - onion = derive2 { name="onion"; version="1.2-7"; sha256="17jx7saxcsahyyivln4v9fzzcmidy6ygjd9n81skv5jpr491zkgk"; depends=[]; }; + onepass = derive2 { name="onepass"; version="0.1.1"; sha256="09d2lifnhmijmp3arx4gf5j9jf3y0i8k07hyjg06aij2d7nvi74s"; depends=[jsonlite]; }; + onewaytests = derive2 { name="onewaytests"; version="2.6"; sha256="05q2ir65x9pvsiim4l029hjhm12niiqjgk5rsx47i6vx23ffg8ir"; depends=[car ggplot2 moments nortest]; }; + onion = derive2 { name="onion"; version="1.5-0"; sha256="07q5wwphb6jsk7ya7hgsf5782yalvhyc7h43hsd9rg4rhpmy8in9"; depends=[emulator]; }; + onlineBcp = derive2 { name="onlineBcp"; version="0.1.1"; sha256="0azm3xmk4fqdzwssdx2g9k00fcz6inwv1qj4lvd0wdz6i7grya8g"; depends=[VIM]; }; onlineCOV = derive2 { name="onlineCOV"; version="1.3"; sha256="04ikvsd76f6xhja7djyv433m88lfj2vf0y9qi6x1s4i9kh8xkbz9"; depends=[]; }; onlinePCA = derive2 { name="onlinePCA"; version="1.3.1"; sha256="08qivsfnwz5vp089lv9czsaz3nfi42kn9yhgzf27dji18y2xscic"; depends=[Rcpp RcppArmadillo RSpectra]; }; onlineVAR = derive2 { name="onlineVAR"; version="0.1-1"; sha256="01z2d91mbdjvwwiqjq1dbqp50jbc9v6d7nw4gs7d1abhsqyiqa13"; depends=[lattice]; }; onlineforecast = derive2 { name="onlineforecast"; version="0.9.3"; sha256="1bsdw4z651ld3p6k2ajahql0ixv65vppqyn6kd9xmcvw6xqys4m1"; depends=[digest pbs R6 Rcpp RcppArmadillo]; }; - onlineretail = derive2 { name="onlineretail"; version="0.1.0"; sha256="0br4az2s4s7wh32cx324wpwhh7xfa9y1skyga349pbyhbgqwiq50"; depends=[]; }; onls = derive2 { name="onls"; version="0.1-1"; sha256="0m7pnlzkqwzi6jncjzxzfvznipd4wg03zd9fc0ymwm9jvhm4p14g"; depends=[minpack_lm]; }; - onnx = derive2 { name="onnx"; version="0.0.2"; sha256="0gyyaplq20cb0bilnmx0k2cm7yzrfvwsawdzs0bha1p5b83l003v"; depends=[reticulate]; }; - ontologyIndex = derive2 { name="ontologyIndex"; version="2.5"; sha256="127hlf0z5fmbgnq4p9h8nvn6p72d2fpcn846zzb99s213421jnry"; depends=[]; }; - ontologyPlot = derive2 { name="ontologyPlot"; version="1.4"; sha256="0sj1jg9lr1w3ahzw7fj86vp2bnvf4nq0x3hiqb3hzngwyj9bykpn"; depends=[ontologyIndex paintmap Rgraphviz]; }; - ontologySimilarity = derive2 { name="ontologySimilarity"; version="2.3"; sha256="1rh3cpj3r82xp4gqvspvgwwi3a29gyi0azrf4r1nshhi8qdx9avw"; depends=[ontologyIndex Rcpp]; }; + onnx = derive2 { name="onnx"; version="0.0.3"; sha256="1s0swrcff9v9ffbjkraahmb398gh2jrca2wf5k6gs8037frnl8wd"; depends=[reticulate]; }; + onsr = derive2 { name="onsr"; version="1.0.0"; sha256="04q88v07r2nzsrxxjy8wlmr65m8czllyv4wq40ms46m83s4pfhpj"; depends=[httr jsonlite readr tibble]; }; + ontoFAST = derive2 { name="ontoFAST"; version="1.0.0"; sha256="0l3d8bp86849rp0qrs1dfv7bjmrfdqvahb1x656vk69fi20722ma"; depends=[dplyr ontologyIndex pbapply plyr shiny shinydashboard stringr sunburstR usethis visNetwork]; }; + ontologyIndex = derive2 { name="ontologyIndex"; version="2.7"; sha256="0j3h1spqwjhh1wbmwivmqcyi042yy7d565c3kxgn70xrmy693x1k"; depends=[]; }; + ontologyPlot = derive2 { name="ontologyPlot"; version="1.6"; sha256="0n51x2im134wq3a54wrv02j1pgkpm1qcgb9hd0y6fchz43i039j1"; depends=[ontologyIndex paintmap Rgraphviz]; }; + ontologySimilarity = derive2 { name="ontologySimilarity"; version="2.5"; sha256="035z572lbsfcnr9c0hl8gir1kgk0dw8dxzr3v8dqd93k6jr6kaxb"; depends=[ontologyIndex Rcpp]; }; oolong = derive2 { name="oolong"; version="0.3.11"; sha256="0yv3xqzyyl81d1xii2b66akmibn1l35lxcv8yr2nflz4b89qcyhd"; depends=[cowplot digest dplyr ggplot2 irr miniUI purrr quanteda R6 shiny stm text2vec tibble]; }; oompaBase = derive2 { name="oompaBase"; version="3.2.9"; sha256="1cmw2s5dznmv675484jgvkzgvi6vhg0zbxsq6zhpqsisf672pjhl"; depends=[cluster]; }; oompaData = derive2 { name="oompaData"; version="3.1.1"; sha256="0by9qfxlx6fdmp12qnphlli5hdn5balvx4ckg64fw6vwa291g7b0"; depends=[]; }; - opalr = derive2 { name="opalr"; version="1.5.1"; sha256="0vma7iyb3zj6kq8w7ggr5xhpxfddqd8mx8yfnp0hjbd5nw7a10c7"; depends=[httr jsonlite mime progress]; }; + opalr = derive2 { name="opalr"; version="2.1.0"; sha256="15hvk4kda5cw31pmh3w14pkw6yq3mx90l1s8lh98lr2di63f9hln"; depends=[httr jsonlite mime progress]; }; + opdisDownsampling = derive2 { name="opdisDownsampling"; version="0.1.0"; sha256="1f071zmspcwgh3am8mb7aapm73an7453pfkv46v6wg3by2ww6nf2"; depends=[caTools pbmcapply pracma twosamples]; }; openCR = derive2 { name="openCR"; version="1.5.0"; sha256="0im2r9f6n0a7wxzdrrmzydiwy5c55bxhr4f9pxxccgz1k596q5yq"; depends=[abind MASS nlme plyr Rcpp RcppParallel secr stringr]; }; openEBGM = derive2 { name="openEBGM"; version="0.8.3"; sha256="120lp7fy6abj6f8g6naq4018d0dfzz6bq3dlh0xdhd4iclb7pplv"; depends=[data_table ggplot2]; }; + openMSE = derive2 { name="openMSE"; version="1.0.0"; sha256="15jp9hybnkwmnkcqawhpd3y3imq6wfxxzxzh90yx4cvzky36hf89"; depends=[crayon DLMtool MSEtool SAMtool]; }; openNLP = derive2 { name="openNLP"; version="0.2-7"; sha256="15yl74wv6w1d2wwpn1xlkkpam3c62977gnqal651fv623v29gg35"; depends=[NLP openNLPdata rJava]; }; openNLPdata = derive2 { name="openNLPdata"; version="1.5.3-4"; sha256="0j45rh9qki8r5wavaysrfsvb3wc3x8jjicqff2yi0r34j58xvlv8"; depends=[rJava]; }; openSTARS = derive2 { name="openSTARS"; version="1.2.2"; sha256="0f3nv6b33r3m7xlh2adbi0wlzr2dw6jfsrmz8fjrlh0l7xakf1hz"; depends=[data_table progress raster rgdal rgrass7 sp SSN]; }; - openSkies = derive2 { name="openSkies"; version="0.99.8"; sha256="1s1821yykhc182wkncw0afhysmv46ihp2as0ynznkl74ijms0qyv"; depends=[httr xml2]; }; - openVA = derive2 { name="openVA"; version="1.0.11"; sha256="0yzq462rf4vfr2xmczb6mks8xp7n3mli95ld8mf1xkj6a2sz584q"; depends=[cli crayon ggplot2 InSilicoVA InterVA4 InterVA5 Tariff]; }; + openSkies = derive2 { name="openSkies"; version="1.1.1"; sha256="1mf3z35h1aqzbiqffkbx124k2s486j7fzrl8gjljn9l6mxrknll6"; depends=[cluster dbscan ggmap ggplot2 httr magick R6 ssh xml2]; }; + openVA = derive2 { name="openVA"; version="1.0.12"; sha256="15xqw0fw50780l2zysi53hv5kg73vldzpv5b81qlvg2wa1j3cxwb"; depends=[cli crayon ggplot2 InSilicoVA InterVA4 InterVA5 Tariff]; }; openadds = derive2 { name="openadds"; version="0.2.0"; sha256="1jb8zd3rpxfkjkg895iab6m4cfi53p5vy3nnpjkgq7ym6499qjcv"; depends=[crul dplyr jsonlite maptools rappdirs readr tibble xml2]; }; - openair = derive2 { name="openair"; version="2.8-1"; sha256="02jw0zcf9sms341f3bylhqbdyz3whgwyqij951dvznayix91bn1k"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr Rcpp readr rlang tidyr]; }; + openair = derive2 { name="openair"; version="2.8-3"; sha256="02x31z3nr9r9429nhxq74sxh4ff9r969z14qxdzhsdamp92zcfk4"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr Rcpp readr rlang tidyr]; }; openblender = derive2 { name="openblender"; version="0.5.81"; sha256="01akixxj04kgrxhv04icrivfpnipnpg9j62i3y19q3jkl9846lh1"; depends=[httr jsonlite]; }; - opencage = derive2 { name="opencage"; version="0.1.4"; sha256="1lqs38lml73axsjlsjkmcsb2irgs40mjrx2cn3k0bjb63qyb9hf5"; depends=[dplyr httr jsonlite memoise]; }; + opencage = derive2 { name="opencage"; version="0.2.2"; sha256="1sjkpp6cj6ivd68p6ql6vwgdvy0fwfkjv84wgwgb4i7f4mnxgnff"; depends=[crul dplyr jsonlite lifecycle memoise progress purrr ratelimitr rlang tibble tidyr withr]; }; opencastR = derive2 { name="opencastR"; version="0.1.3"; sha256="1ljn7bzrqc2sgah1a6q2g9hi38nm8davhdc2vyzx7d40z7ysfpas"; depends=[httr jsonlite]; }; - opencpu = derive2 { name="opencpu"; version="2.2.1"; sha256="0qv0w52xrvq5i819lrd6yf1bzjz95xi697yzsszh563dvwksxnhs"; depends=[brew curl evaluate httpuv jsonlite knitr mime openssl protolite rappdirs remotes sys webutils zip]; }; - opencv = derive2 { name="opencv"; version="0.2.0"; sha256="0lilsw46sp217vybn793md1kcc09z426qf9dc9rmkmvfb86q8k8v"; depends=[magrittr Rcpp]; }; + opencpu = derive2 { name="opencpu"; version="2.2.2"; sha256="0dr3ga8vw10vllqjq6n53dwivvgvzrgrjcn17kmabp620533bj1k"; depends=[brew curl evaluate httpuv jsonlite knitr mime openssl protolite rappdirs remotes sys webutils zip]; }; + opencv = derive2 { name="opencv"; version="0.2.1"; sha256="1zb6qdvlgylzm9afq8ybcrn2w5wcym6zi4b36sycp4clbc7gncq5"; depends=[magrittr Rcpp]; }; opendatatoronto = derive2 { name="opendatatoronto"; version="0.1.4"; sha256="0ggf25ry31xz69fl95cglg45ld8w7rc83wci609fmb63bhj8dzlg"; depends=[ckanr curl magrittr readxl sf tibble xml2]; }; opendotaR = derive2 { name="opendotaR"; version="0.1.4"; sha256="17cygsw3nkg6zincfrcdh1509rlz3n5zrv9wvv7mjngm61sn79nf"; depends=[dplyr jsonlite lubridate]; }; - openintro = derive2 { name="openintro"; version="2.0.0"; sha256="1pr24cph9vxp0d0k1pmyk3kwzbj5jb96nkvsm6n1ky79msiax9fm"; depends=[airports cherryblossom ggplot2 rmarkdown tibble usdata]; }; + openintro = derive2 { name="openintro"; version="2.1.0"; sha256="0qxgjk9bnkicx5hsg1imgp3v61l35714akarwflaazjrrgpf88j9"; depends=[airports cherryblossom ggplot2 readr rmarkdown tibble usdata]; }; openmetrics = derive2 { name="openmetrics"; version="0.3.0"; sha256="0bcljsirlkxn0h87j2g2jb6spcik84h7nms06mcj40ckx188yr82"; depends=[R6]; }; - openssl = derive2 { name="openssl"; version="1.4.3"; sha256="0sc2skh1nz7jj65p0pq4a6bl8jza6lyi4zvmvwndzxfgivgh281l"; depends=[askpass]; }; - opentimsr = derive2 { name="opentimsr"; version="1.0.2"; sha256="07z36a1avrz31dhlg7pzfbazwdp0dqhxr7kk2i9mrw26qcwkl095"; depends=[DBI Rcpp RSQLite]; }; + openssl = derive2 { name="openssl"; version="1.4.4"; sha256="0x68di44vrqvikr419mgh9wlvbhxs52zda9pb6spikx69m4v83wj"; depends=[askpass]; }; + opentimsr = derive2 { name="opentimsr"; version="1.0.5"; sha256="07yqx1rv53l0z2dlv9y1mrwv77jwqpyzkbg648zpqajfwr7ndqjx"; depends=[DBI Rcpp RSQLite]; }; opentraj = derive2 { name="opentraj"; version="1.0"; sha256="13nqal96199l8vkgmkvl542ksnappkscb6rbdmdapxyi977qrgxk"; depends=[doParallel foreach maptools openair plyr raster reshape rgdal sp]; }; opentripplanner = derive2 { name="opentripplanner"; version="0.3.1"; sha256="1bavs7k27zicsjvz65va45cpmmviddxsgqir0hvpl9z40ml1gnp0"; depends=[checkmate curl data_table geodist googlePolylines lubridate pbapply rjson sf sfheaders tibble]; }; openxlsx = derive2 { name="openxlsx"; version="4.2.3"; sha256="0vz4nlrwgsiifrgza8kfd9i1c0ya6plymrgk59vyy2z54vc8kvyd"; depends=[Rcpp stringi zip]; }; opera = derive2 { name="opera"; version="1.1"; sha256="1nvm7a1g0pzzlpyk7g5plys1byl4xq2wz59hqys5gxiq0y5sgqwm"; depends=[]; }; operator_tools = derive2 { name="operator.tools"; version="1.6.3"; sha256="1v4dg7xhz24dnp0zxn815x1405ig64ibii6y40la1gvmzcc41dz5"; depends=[]; }; operators = derive2 { name="operators"; version="0.1-8"; sha256="0zgcv2q46qyqv4dhbd33s4044zjw38w8dqfpzs0c1lxjpkil3dnx"; depends=[]; }; + opitools = derive2 { name="opitools"; version="1.0.3"; sha256="15hafkkcyk7rh6cz9bhzlqdcmmkqp6051811ic5mzwn0x9chf0hb"; depends=[cowplot dplyr ggplot2 likert magrittr purrr stringr tibble tidyr tidytext]; }; oppr = derive2 { name="oppr"; version="1.0.2"; sha256="1swwb0p7lwladircp2zm78yhjy6kkl7r3j3sh0wf0zq3rqyj8qkh"; depends=[ape assertthat cli ggplot2 lpSolveAPI magrittr Matrix proto Rcpp RcppArmadillo RcppProgress tibble tidytree uuid viridisLite]; }; - ops = derive2 { name="ops"; version="1.0"; sha256="0cvwyn5sz5lx8sin8w4k8ymslfl4nfaa012a9vcl2hvp4850rk25"; depends=[]; }; optAUC = derive2 { name="optAUC"; version="1.0"; sha256="0j1llzqa3n7kqw3i5bb7284z0hi6s5jbjfl9zap0l7xf6hg4x1dn"; depends=[MASS]; }; - optBiomarker = derive2 { name="optBiomarker"; version="1.0-27"; sha256="1kkj602d4klwyd8kylawgfysg8dlp2g6j7afkppzv5x8mbhs5ji4"; depends=[e1071 ipred MASS Matrix msm randomForest rgl rpanel]; }; + optBiomarker = derive2 { name="optBiomarker"; version="1.0-28"; sha256="10i9ir0056qxyiayg10v6v25m1b94m1wd7c8ssigiqjhjncpddw5"; depends=[e1071 ipred MASS Matrix msm randomForest rgl rpanel]; }; optCluster = derive2 { name="optCluster"; version="1.3.0"; sha256="0vzdd9awxli0zzyh2xb7j7wxza3fz5awyz6bjwf13qbjrrq43q2q"; depends=[cluster gplots kohonen MBCluster_Seq mclust RankAggreg]; }; optDesignSlopeInt = derive2 { name="optDesignSlopeInt"; version="1.1"; sha256="0vpm4359rq5v231k63vgaac6iv2ybfkcpy59n86djb710b3h2qcn"; depends=[MCMCpack neldermead]; }; optR = derive2 { name="optR"; version="1.2.5"; sha256="0q7jf4m0gzm11izl5lff17pvr855smqmc6zzi1bc7m6h3z865l32"; depends=[]; }; optband = derive2 { name="optband"; version="0.2.1"; sha256="1rv4r7h7x3xipav917cz9bcr6nqjzbinfrqxv8mcls9gdl9ha3y9"; depends=[LambertW]; }; optbdmaeAT = derive2 { name="optbdmaeAT"; version="1.0.1"; sha256="1y1mvcyjihpj1wgjmifhmd10717wr1srp7h87azs4gfypgsiqchn"; depends=[igraph MASS Matrix]; }; + optbin = derive2 { name="optbin"; version="1.1"; sha256="1v79qq1az8sg1slh9k3rqznw3dmppg0d0x7i2j5sz78b8gfq2m17"; depends=[]; }; optextras = derive2 { name="optextras"; version="2019-12.4"; sha256="1sqkid6h13h8i8wzri26s828ycwlxlwpwxd85r8bw9h8hs1n602r"; depends=[numDeriv]; }; optiRum = derive2 { name="optiRum"; version="0.40.1"; sha256="1kl9mzh53pwhrxbn89dsjjpfji7k8vmysscd1qd9sw7vqdan8g6x"; depends=[AUC data_table ggplot2 knitr plyr scales stringr XML]; }; - optiSel = derive2 { name="optiSel"; version="2.0.3"; sha256="0wkvpwvcckhsjnk17pgdrbsl0qihdpibjbmw2x5izc0vj2zw7fzf"; depends=[data_table doParallel ECOSolveR foreach kinship2 magic MASS Matrix nadiv optiSolve pedigree plyr pspline purrr quadprog Rcpp RcppArmadillo reshape2 stringr]; }; + optiSel = derive2 { name="optiSel"; version="2.0.5"; sha256="13rxv6wqz5gpmsfb96173p1y8140zqj4llihxsvjczcqwhrayjha"; depends=[data_table doParallel ECOSolveR foreach kinship2 magic MASS Matrix nadiv optiSolve pedigree plyr pspline purrr quadprog Rcpp RcppArmadillo reshape2 stringr]; }; optiSolve = derive2 { name="optiSolve"; version="0.1.2"; sha256="0jlxn2rkq6dj59p84f0xdkdgl1yzfbf3ldxryb612j9ivcfkcrvp"; depends=[alabama cccp MASS Matrix nloptr plyr Rcpp shapes stringr]; }; opticskxi = derive2 { name="opticskxi"; version="0.1"; sha256="1vdz5sgjgyh2nj034w87d2yxcbbg97f1b0vijlwzwjkrfz5knfhl"; depends=[ggplot2 magrittr]; }; opticut = derive2 { name="opticut"; version="0.1-2"; sha256="1j479wa7mlp62c2y7shha1w7ybhfy8wvjfaz27kmwd1f61ma1g0l"; depends=[betareg MASS mefa4 pbapply pscl ResourceSelection]; }; @@ -12180,7 +12670,8 @@ in with self; { optigrab = derive2 { name="optigrab"; version="0.9.2.1"; sha256="1c3q4kx8rkgpjsy0hy2w2dd9kv51avnw1ab82hzmjgngfnvaig0n"; depends=[magrittr stringi]; }; optim_functions = derive2 { name="optim.functions"; version="0.1"; sha256="1la3v8yd9cdichp3mka4x86hr9lynh6qfg7h9ab6cwijw6kzkn6g"; depends=[lhs randtoolbox stringr]; }; optimCheck = derive2 { name="optimCheck"; version="1.0"; sha256="1qjkv1mfyn7sw0dkxxcdaqj85vl71cgffpf3k3mvzy0s8yhxjb4n"; depends=[]; }; - optimParallel = derive2 { name="optimParallel"; version="1.0-1"; sha256="0ck6a1lv5as98hzww7cjkzwrggq7bzmdhd0djkzvkwmx8h35chy6"; depends=[]; }; + optimLanduse = derive2 { name="optimLanduse"; version="0.0.4"; sha256="0mwb1znl0f4ki64lrk9yfq7v6iffp9qdym36w6ab5lndcc9bqn0y"; depends=[dplyr lpSolveAPI tidyr]; }; + optimParallel = derive2 { name="optimParallel"; version="1.0-2"; sha256="178ayfaivkbxkghxbg97lx4gl27kxkmgaaw9y8q5206r4cncd6qg"; depends=[]; }; optimStrat = derive2 { name="optimStrat"; version="2.3"; sha256="1jkwhgpw7nknd7h8c01z25x566bw2qb388i6g5nwcygxsshdgpri"; depends=[cubature mvtnorm shiny]; }; optimalThreshold = derive2 { name="optimalThreshold"; version="1.0"; sha256="1m39q36p7i7z31b90awriq5jf9rfybyw5lj3m1w33v2ssipkzp1n"; depends=[ars coda HDInterval mgcv rjags]; }; optimbase = derive2 { name="optimbase"; version="1.0-9"; sha256="0ivz24kf3yacgq5bl3s3az1pcyhsz0cza5f8vdksy5gchwqplm8n"; depends=[Matrix]; }; @@ -12193,7 +12684,7 @@ in with self; { optinterv = derive2 { name="optinterv"; version="0.1.0"; sha256="1yvjb9fyqj3pfglfdwdq4kpw9i5g5i3klgpqb05xdnacbnpdxvmp"; depends=[boot distances Hmisc lattice pbapply rootSolve weights]; }; optional = derive2 { name="optional"; version="2.0"; sha256="0hj0gwvk9svllv44kfdgv3a2mriwqnaxvn3rj7w1djha7mryl6jl"; depends=[magrittr]; }; optionstrat = derive2 { name="optionstrat"; version="1.4.1"; sha256="0vidaf888zdls5yxy7637fqg6r39l3rxw9bhn16s4xmag7kawljv"; depends=[]; }; - optiscale = derive2 { name="optiscale"; version="1.2"; sha256="185yv0xizrrjik0ydyknms28p8ql9x54bhnq3wpyrbiinjm51fms"; depends=[lattice]; }; + optiscale = derive2 { name="optiscale"; version="1.2.2"; sha256="1ay2lfk4isv0gir5diwxlx4ml5bv5qyqbwm34py85fp6bh92987r"; depends=[lattice]; }; optmatch = derive2 { name="optmatch"; version="0.9-13"; sha256="1n6h6j0rk750jqxwxkbzdid1ig5xp8xpjw356xrqg02wm7x2gwzq"; depends=[digest Rcpp RItools survival]; }; optparse = derive2 { name="optparse"; version="1.6.6"; sha256="1l301dy3gc8pn7j00awcjh41wmc1ks9kswak255kbsa6f54rsxsi"; depends=[getopt]; }; optpart = derive2 { name="optpart"; version="3.0-3"; sha256="18h659gbgzflq81lcchc058xjgljkmhpsjkh51ylygwrv1qjrz2i"; depends=[cluster labdsv MASS plotrix]; }; @@ -12213,7 +12704,7 @@ in with self; { orderbook = derive2 { name="orderbook"; version="1.03"; sha256="0dlvjrzdhhh8js4g1lvxs46q7fdxfxavxnb4nj6xlwca75i51675"; depends=[hash lattice]; }; ordering = derive2 { name="ordering"; version="0.7.0"; sha256="0sgwgcjg6sazmi11c9qvxfrzg671kcp18i2q20xbmbj4v3yqhwbh"; depends=[]; }; orderly = derive2 { name="orderly"; version="1.0.4"; sha256="0z83aha45nhi7mym1mygp60jim8znyknmc254gd2cvmg7cmifzb7"; depends=[DBI digest docopt fs ids R6 RSQLite withr yaml zip]; }; - orders = derive2 { name="orders"; version="0.1.4"; sha256="1ixm3w3kbzaas3is3gdw5hx6vp4a9azaly2zd35rgpqrxk9zb2kk"; depends=[gamlss_dist Newdistns]; }; + orders = derive2 { name="orders"; version="0.1.5"; sha256="0g5rxlbgf3i34xgrn4vhbha7svlqy7jc9hhznjikb1v5wc5zc39d"; depends=[gamlss_dist Newdistns]; }; orderstats = derive2 { name="orderstats"; version="0.1.0"; sha256="0a3ga0cjryvbininspsx5wzc96s3fza06s3d5fhbllbixz0rap4a"; depends=[]; }; ordiBreadth = derive2 { name="ordiBreadth"; version="1.0"; sha256="04faqhas1p9lxhghd4xq07yq1nxv7ns18avhvkql7sy5a9g7bfs1"; depends=[vegan]; }; ordinal = derive2 { name="ordinal"; version="2019.12-10"; sha256="09bpmjmbf4x82kgf6bm4bkncq2apdv9mk20zj4zgma2jx2vyfhbs"; depends=[MASS Matrix numDeriv ucminf]; }; @@ -12226,6 +12717,7 @@ in with self; { ordinalgmifs = derive2 { name="ordinalgmifs"; version="1.0.6"; sha256="0axpndyyns649mwifq8f16l8n8x9nic8cv8l71ljyr2gwlm0nqz0"; depends=[survival]; }; ordinalpattern = derive2 { name="ordinalpattern"; version="0.2.0"; sha256="0nf7323wd8wm4qxlhr6cvm1l87rwfdr5c4qivhncy0m2n5vknc1c"; depends=[gtools mvtnorm]; }; ore = derive2 { name="ore"; version="1.6.3"; sha256="1vh6w3arrhgkfjjjw7ci91xmz4wpfr3cmwd5zkqch89dgn07skkv"; depends=[]; }; + oreo = derive2 { name="oreo"; version="1.0"; sha256="1qzv6fjana5fx45msqasqfniiancsch6j8r1llh1xyg2wjhqdj23"; depends=[fftwtools ggplot2 gridExtra openxlsx pracma scales spectral]; }; ores = derive2 { name="ores"; version="0.3.2"; sha256="0xzc0d38z7h5ghab3kqsv0r2cl3888j7vn94p51xlwcbhnq10kip"; depends=[httr]; }; orf = derive2 { name="orf"; version="0.1.3"; sha256="19drrxvnh9y33p0g8pv9bhl6i8jpsdc7nkcpbpxbrsc5hs96dycp"; depends=[ggplot2 ranger Rcpp xtable]; }; org = derive2 { name="org"; version="2019.4.2"; sha256="0jrnr22slgzwsdb4a1jb1l878smhvfb680cgmgb3a88jqj4jfscl"; depends=[]; }; @@ -12233,14 +12725,13 @@ in with self; { orgutils = derive2 { name="orgutils"; version="0.4-1"; sha256="1yc3avhq3786his7nd60zfbzd9inkfrfz938r8378z59zbb1mzqq"; depends=[textutils]; }; orientlib = derive2 { name="orientlib"; version="0.10.4"; sha256="0lds3y05byag466asi8hmv1yfllsdx7z5i8hq21r6dx3w4n4f46x"; depends=[]; }; origami = derive2 { name="origami"; version="1.0.3"; sha256="034h9dnllzllqd0pzx2if69x17gaxfjrfi4ini6gh23asr3krls3"; depends=[abind assertthat data_table future future_apply listenv]; }; - originr = derive2 { name="originr"; version="0.4.0"; sha256="0r5aqy5vc3d5r3ln07qs6jbyiglcn4wymljmmrlxflpjw8arw9sn"; depends=[crul data_table jsonlite taxize xml2]; }; orloca = derive2 { name="orloca"; version="4.10"; sha256="113y76gyhslpfyq7n1nnbgnxhxgr213f28vnc3n3b9pghkkr0p4z"; depends=[knitr png rmarkdown ucminf]; }; orloca_es = derive2 { name="orloca.es"; version="4.9"; sha256="00zb08dqcsh1ljl4f2djm1pwbrfbaddgapn3v8nascmwxlhb2hkw"; depends=[orloca]; }; ormPlot = derive2 { name="ormPlot"; version="0.3.4"; sha256="1s38alb602javkizxp3gqkmsq6zvl983gv4bcgd8752fvvddbf4s"; depends=[ggplot2 gtable rms]; }; oro_dicom = derive2 { name="oro.dicom"; version="0.5.3"; sha256="1ar70xk2bqk7jgckfivgp4np3dxaynmgdg41n8x0sg9cpxl2lc38"; depends=[oro_nifti]; }; oro_nifti = derive2 { name="oro.nifti"; version="0.11.0"; sha256="1kmlc82gp02v4p62kaxvv55rizbs6znphr0dpka8fl4addgld4si"; depends=[abind bitops RNifti]; }; oro_pet = derive2 { name="oro.pet"; version="0.2.6"; sha256="1dczii7knh9241ksswxk9zg1d69mhk2ilrk4kjv7cj9nfm8fgmja"; depends=[minpack_lm msm oro_dicom oro_nifti]; }; - orsifronts = derive2 { name="orsifronts"; version="0.1.1"; sha256="1js4q2s1mn263x8szl5q47ajfxv9lsjd5zyphwyhbkqrnd8ijd3w"; depends=[sp]; }; + orsifronts = derive2 { name="orsifronts"; version="0.2.0"; sha256="0nxhijiqhhrxwrm5fy619lsdqyji43xyfqg4309pfb7da4377i3q"; depends=[sp]; }; orsk = derive2 { name="orsk"; version="1.0-5"; sha256="19bpvsdjwjm62a2kfh3xjpqnn39kls656kh832frkqa08bdd7zjk"; depends=[BB BHH2]; }; orthoDr = derive2 { name="orthoDr"; version="0.6.4"; sha256="1h2djq1s67yx1mkc5hl81471q4qwv8z71hmyl5rvbwy8kfyxfc6b"; depends=[dr MASS plot3D pracma Rcpp RcppArmadillo rgl survival]; }; orthogonalsplinebasis = derive2 { name="orthogonalsplinebasis"; version="0.1.6"; sha256="07rbd0fhs2gsk7wj41y2h7wf6pfg324vzv2al753d8kqyx5ns2dj"; depends=[]; }; @@ -12252,106 +12743,110 @@ in with self; { oshka = derive2 { name="oshka"; version="0.1.2"; sha256="02hglpq5lknq93zbcf219lhnhppzgygkhxqixb15f89rxf9fczgs"; depends=[]; }; oskeyring = derive2 { name="oskeyring"; version="0.1.1"; sha256="04i5nbgwwwsi0g94kyyhh29jsfn9jzjn6ihpj0ah8vj6yama152b"; depends=[]; }; osmar = derive2 { name="osmar"; version="1.1-7"; sha256="0q6d8nw7d580bnx66mjc282dx45zw9srczz90b520hjcli4w3i3r"; depends=[geosphere RCurl XML]; }; - osmdata = derive2 { name="osmdata"; version="0.1.4"; sha256="019d8yb83w8r67ryd0zi02w0rppm4mv0a8z3wb4vkl58n2xs777m"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp tibble xml2]; }; + osmdata = derive2 { name="osmdata"; version="0.1.5"; sha256="1j3zff185s9lgam4fk8md8by1apf3z6q56a0rg6yi26nfl8ly2i3"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp tibble xml2]; }; + osmextract = derive2 { name="osmextract"; version="0.2.1"; sha256="0p0zy1vlshdk9a1npjr6ij47q61yq3f0bv1p245bf3ifw8n52wf1"; depends=[sf]; }; + osmgeosample = derive2 { name="osmgeosample"; version="0.1"; sha256="1vcdisf147mcdqkc35czcphjh6rhaix9vy6l5inknaarmmajri3x"; depends=[dplyr geoR mapview nngeo osmdata pdist processx qpdf Rcpp rgdal sf sp splancs tibble]; }; osmose = derive2 { name="osmose"; version="3.3.4"; sha256="144mklbish59amzz7j95qmn98yqlz3bqzd2rp03wg9f5s69bxjj6"; depends=[fields knitr mgcv ncdf4 rlist rmarkdown stringr]; }; - osmplotr = derive2 { name="osmplotr"; version="0.3.2"; sha256="0k5rjxsi1sfcxcl6lf8zcncqnshz2jaz7hcwn2ifg4yhvxvkfma8"; depends=[curl e1071 ggm ggplot2 httr mapproj osmdata rgeos sp spatstat]; }; + osmplotr = derive2 { name="osmplotr"; version="0.3.3"; sha256="0p94phv7jn0q9k25300zz59ldfphm9xgy6i7n3r8xj4zay0c7mf2"; depends=[e1071 ggm ggplot2 mapproj osmdata rgeos sp spatstat spatstat_core spatstat_geom]; }; osqp = derive2 { name="osqp"; version="0.6.0.3"; sha256="1266n04c8zsv4ixf7y25jkccv9lx3rvmd7bnkxynbwga9psd3l0j"; depends=[Matrix R6 Rcpp]; }; - osrm = derive2 { name="osrm"; version="3.4.0"; sha256="15gfbjc3iz8vk03i3vqlk0yqvg75vfgjvhw8w561k0s0vx9677l7"; depends=[gepaf isoband jsonlite RCurl sf sp]; }; + osrm = derive2 { name="osrm"; version="3.4.1"; sha256="1445ak76jp5nym80cv33rbimcj4am6jj6858sag28r2bg1jxf4dj"; depends=[curl googlePolylines isoband jsonlite sf sp]; }; osrmr = derive2 { name="osrmr"; version="0.1.35"; sha256="1pmsybyqkgpqz0yhfmwrsa2smgmclxzk9mlzcqmm8ph6dcd1x0s8"; depends=[assertthat bitops R_utils rjson stringr]; }; ot = derive2 { name="ot"; version="0.2.0"; sha256="0lym92hsxhfjdkh738rxlpkq084454055vgxm2b4wdhqw00jwf5y"; depends=[]; }; otinference = derive2 { name="otinference"; version="0.1.0"; sha256="1l75jjnkyk8yzaw9zyk45jq9ys304i6pzm2xd5apxrb1jk75a3li"; depends=[MASS Rglpk sm transport]; }; otp = derive2 { name="otp"; version="0.1.0"; sha256="0l0r56kn8jmjxhzz646fimi91blpgpynrrgfd03rh3dbifd5xhdz"; depends=[base64url openssl R6]; }; - otpr = derive2 { name="otpr"; version="0.4.2"; sha256="1j4phnx64526ql0wj0lv2jypqs9xx8h3x7xgrlwwn59xhshmghq9"; depends=[checkmate geojsonsf httr janitor jsonlite sf urltools]; }; + otpr = derive2 { name="otpr"; version="0.5.0"; sha256="050w7b9b14w03agahfy2n6y5fpk2y5hp501dnlbxzzj66a714v4h"; depends=[checkmate dplyr geojsonsf httr janitor jsonlite rlang rrapply sf urltools]; }; otrimle = derive2 { name="otrimle"; version="1.6"; sha256="08s46d5mjkrr2wc91hyrjymay34283vi6pz9lrr09dn0870vrhmw"; depends=[doParallel foreach mclust]; }; otsad = derive2 { name="otsad"; version="0.2.0"; sha256="1jb6raxm70aywbgs7bdyw8vccy1nj924f4hkpjrlgnvzmy0hyhvs"; depends=[ggplot2 plotly reticulate sigmoid]; }; otuSummary = derive2 { name="otuSummary"; version="0.1.1"; sha256="04l667qmp7wqkbdsk87j92gf89s13090kzs8cjlmxsp6i69r34z2"; depends=[reshape2 vegan]; }; otvPlots = derive2 { name="otvPlots"; version="0.2.1"; sha256="0fjx0kl9y77mazwy7lg4mxc9sg8ysvvbl4h3k6bvfpnjm5x62hff"; depends=[data_table ggplot2 gridExtra Hmisc moments quantreg scales stringi]; }; - ouch = derive2 { name="ouch"; version="2.14-1"; sha256="0ddf9bw5lhj8vb0ja78jf99i0smq4rgmm842k4a4ygap41vdyn2b"; depends=[subplex]; }; - outForest = derive2 { name="outForest"; version="0.1.0"; sha256="0wkji836xrf7izx3ibrf1ylcm4ph766ih3qd7wqjsjfx2cz5bpjr"; depends=[FNN missRanger ranger]; }; - outbreaker2 = derive2 { name="outbreaker2"; version="1.1.1"; sha256="01i8abwg3g352nbrpaf8iahsjc4cbpph993x867yyvgj12nvsgs3"; depends=[ape ggplot2 magrittr Rcpp visNetwork]; }; + ouch = derive2 { name="ouch"; version="2.16"; sha256="17y7qksp9v4jkr4h1psg14y3ridwhi4mgkfm0a02paabhwjc8d96"; depends=[subplex]; }; + outForest = derive2 { name="outForest"; version="0.1.1"; sha256="183chvs5d5bb0qdgw1gxllb2ibjwyzyfn00fjjwnycald65figm3"; depends=[FNN missRanger ranger]; }; + outbreaker2 = derive2 { name="outbreaker2"; version="1.1.2"; sha256="0za20xl76i17pi2w2l69yiqrhfiichk4mngn062vv1hvqz4qgx4r"; depends=[ape ggplot2 magrittr Rcpp visNetwork]; }; outbreaks = derive2 { name="outbreaks"; version="1.9.0"; sha256="0x6r4rzcvd1rp8j4brq9c0zl2xsl5jfi18dny20an7aqk310p11v"; depends=[]; }; outcomerate = derive2 { name="outcomerate"; version="1.0.1"; sha256="07mwml7r98qjgvrp938sqf7klyspz110583j0zwb72j69n4whmrj"; depends=[Rdpack]; }; outliers = derive2 { name="outliers"; version="0.14"; sha256="0vcqfqmmv4yblyp3s6bd25r49pxb7hjzipiic5a82924nqfqzkmn"; depends=[]; }; - outliertree = derive2 { name="outliertree"; version="1.3.1"; sha256="00pllbw9qr15bsv2dbzdx4iqy8yknilwy374il8ygyhx4j7wbgas"; depends=[Rcereal Rcpp]; }; + outliertree = derive2 { name="outliertree"; version="1.7.1"; sha256="0hz7rji34147516r0lh9zs70n0pq7n7ihin3xsj1rxsysz06zgc1"; depends=[Rcereal Rcpp]; }; outreg = derive2 { name="outreg"; version="0.2.2"; sha256="04f1x7mxq4swbd7bfwjjgx4838jm6qj4piaighmhcscwrdkxa1cp"; depends=[magrittr reshape2 sandwich stringr tidyr]; }; outsider = derive2 { name="outsider"; version="0.1.1"; sha256="082yygvjs31clz8b3p59gkc26249gqp8hl1071gm6zi4vi2ng43x"; depends=[crayon curl jsonlite outsider_base remotes tibble yaml]; }; - outsider_base = derive2 { name="outsider.base"; version="0.1.3"; sha256="1ai7rm3y2zamg03l7mrhbpa93l5y33g70k5vqyqbhmgx3h3ayj6c"; depends=[callr cli crayon devtools jsonlite praise sys tibble withr yaml]; }; + outsider_base = derive2 { name="outsider.base"; version="0.1.4"; sha256="1wlr3a14a330r9p4lahdmgs4hbgfsp05rsbzr30djwpv21bfl03a"; depends=[callr cli crayon devtools pkgload sys tibble yaml]; }; ouxy = derive2 { name="ouxy"; version="2.1"; sha256="0mdjxg7wm68882hbwl0gg15dld6f90xyf0s6hk2z90r34bvyky0i"; depends=[abc adephylo ape coda EasyABC geiger maps MCMCpack nlme phytools Sim_DiffProc TreeSim]; }; overdisp = derive2 { name="overdisp"; version="0.1.1"; sha256="0gncmirpiqyxsgpsdrv875i6a9bagpz76vcbqxsaql537m1fd99r"; depends=[]; }; overlap = derive2 { name="overlap"; version="0.3.3"; sha256="17cnr4qin1qy0df4k491267acna12gpbbps6w3gi8nccqxfrb1pd"; depends=[]; }; overlapping = derive2 { name="overlapping"; version="1.6"; sha256="0qy5jw4nn4l6rb36sxd9waz7x4g18q42dsk12hvsnan5jyzcdwfn"; depends=[ggplot2 testthat]; }; - overlapptest = derive2 { name="overlapptest"; version="1.1"; sha256="0r732za6lm7dk5r237nhadgbpinaz5dmb6f7pn3mbg0plkdy3mff"; depends=[spatstat]; }; + overlapptest = derive2 { name="overlapptest"; version="1.2-4"; sha256="148vswcvy0anw6xrpfsskjn0i7jkn0jbfqlaf4bb13pkini2bahf"; depends=[spatstat_geom]; }; overture = derive2 { name="overture"; version="0.4-0"; sha256="1s16x5kn0apb0w1f7hqzcsqvw3x621y5n6yr1qn7yb7431pdw3cz"; depends=[bigmemory]; }; overviewR = derive2 { name="overviewR"; version="0.0.7"; sha256="1y8iqgyhppl2w9z59azi3h1kgzrw5a1zqw09zyjp0ghlvpjbn9cn"; depends=[dplyr ggplot2 tibble]; }; owd = derive2 { name="owd"; version="1.0.6"; sha256="08f1zzlnkfdzm5rlw14qm6yvn68j2yas21zjsy31pc59rh3lzkyh"; depends=[]; }; owdbr = derive2 { name="owdbr"; version="1.0.1.1"; sha256="0q4654zr5aw04sssy7127vafry72b7p3d8i44fqvqg3055awin0i"; depends=[data_table dplyr httr jsonlite magrittr tibble]; }; owmr = derive2 { name="owmr"; version="0.8.2"; sha256="0qlb5aw6n06yf8y2gd2fjp8kp3w0xgqh3fka7rxqndgvaqmin1a6"; depends=[httr jsonlite magrittr plyr tibble tidyr]; }; ows4R = derive2 { name="ows4R"; version="0.1-5"; sha256="0zl6nvcrzjcaz43ji2a6ym3mvfzfvf8lyb29hg8sidribr6js3nk"; depends=[geometa httr openssl R6 rgdal sf XML]; }; - oxcAAR = derive2 { name="oxcAAR"; version="1.0.0"; sha256="19inf2bcpfj4jzfym1v5f1w5fkmcycz5jrfc2hf0wsvixy53lfxa"; depends=[jsonlite stringr]; }; + oxcAAR = derive2 { name="oxcAAR"; version="1.1.0"; sha256="0jy0vjiyb02nc2nrc4psnzcrwr00wvjmx2lpkb00fnh1zm69sf0x"; depends=[jsonlite stringi stringr]; }; oxcgrt = derive2 { name="oxcgrt"; version="0.1.0"; sha256="006kdggqdy7nkllln5p7fsapmmn5wlampyw2ifc4ls9jbz0p5h16"; depends=[countrycode dplyr jsonlite magrittr stringr tibble tidyr]; }; oxcovid19 = derive2 { name="oxcovid19"; version="0.1.2"; sha256="0ax6vg1mcgj03zy47d8pcmlbn538lxhx0l4n9cpqknd7g76l018i"; depends=[countrycode DBI dbplyr dplyr lubridate magrittr RPostgres sf]; }; - oysteR = derive2 { name="oysteR"; version="0.1.0"; sha256="1az9z5daf525bw4hk9qri5n1qfsgnbbm2m2apgpcv479iqgdd4zr"; depends=[cli dplyr glue httr jsonlite purrr rjson rlang stringr tibble tidyr yaml]; }; + oysteR = derive2 { name="oysteR"; version="0.1.1"; sha256="11zg959h9104hh8wid4003s8c4z9xhmicj39cc5vq1j8g1g7ilr7"; depends=[cli dplyr glue httr jsonlite purrr rjson rlang stringr tibble tidyr yaml]; }; oz = derive2 { name="oz"; version="1.0-21"; sha256="0p4r8qbpv7q6vad940540pd3lk79pyfj41h2cn22hsy1j0va1qbv"; depends=[]; }; - ozmaps = derive2 { name="ozmaps"; version="0.3.6"; sha256="17lh5lgblyryvgk2cman1xwqz5hc0v4s58f3xz36z5qjrcs1599r"; depends=[oz sf tibble]; }; + ozmaps = derive2 { name="ozmaps"; version="0.4.0"; sha256="1znmji1z7x1vmalchvsfdpw8zh1kv7vb42y4pa7rlvk9cz6plw29"; depends=[oz sf tibble]; }; p2distance = derive2 { name="p2distance"; version="1.0.1"; sha256="1ims8i5z5k97kjpdysgx8g7lgvnvf7amahcrssw7bk38bvbxawni"; depends=[]; }; p3state_msm = derive2 { name="p3state.msm"; version="1.3"; sha256="0gbrka62ylxx64r3abpk60y92k2lk5smlf8na68qazph8llsl2rv"; depends=[survival]; }; pAnalysis = derive2 { name="pAnalysis"; version="2.0"; sha256="0pykdlbynzgcbnjs8xs8frgncf53l8qgf6na34adq7da76n570hi"; depends=[coin ggplot2]; }; pBrackets = derive2 { name="pBrackets"; version="1.0"; sha256="0cwv609hzp8anfv3cgfbspz8w0g1ljfz05wm4xfhwy15v32fckrj"; depends=[]; }; pCODE = derive2 { name="pCODE"; version="0.9.3"; sha256="067hhlj75l04b404fidvb2rkj6bb3zxrjy37p5vzvc5a1p1pcnf5"; depends=[deSolve fda MASS pracma]; }; pCalibrate = derive2 { name="pCalibrate"; version="0.2-1"; sha256="0gi4hjnykn4gbj9krmw4z1qy4lbxkvacczkks3zkwalw9ylwkpxl"; depends=[exact2x2 MCMCpack]; }; - pGLS = derive2 { name="pGLS"; version="0.0-1"; sha256="1rlk8q09sikf4vpzsx0c7s6qqh2hxf8dy2bgcm4nnkbv2nfjz438"; depends=[MASS]; }; pGMGM = derive2 { name="pGMGM"; version="1.0"; sha256="1hkczz38g8a8253jm8vhm8948fs91g6b2rfzkz47srkkby9ksa4x"; depends=[JGL MASS mvtnorm]; }; pGPx = derive2 { name="pGPx"; version="0.1.1"; sha256="0b3pjrk7496nlw1cv5m6yfp02c663452z67y21yhhm26b17nrldv"; depends=[DiceKriging KrigInv pbivnorm pracma randtoolbox Rcpp RcppArmadillo rgenoud]; }; pKSEA = derive2 { name="pKSEA"; version="0.0.1"; sha256="1k9javxbhx28hf5k3i66ggqwlws2w9qwp01g8f7jmyp92pxr3qqd"; depends=[]; }; pRF = derive2 { name="pRF"; version="1.2"; sha256="17srabk7mam16rdzc5g9ggdrhjjk8wibny40gxvgzkv7qgq7m80x"; depends=[dplyr ggplot2 multtest permute randomForest reshape2]; }; - pROC = derive2 { name="pROC"; version="1.16.2"; sha256="0apwa5zzqh74pjnvf5a1s5qf6i9r5h44jdllfrwymkd2v479d2xn"; depends=[plyr Rcpp]; }; + pROC = derive2 { name="pROC"; version="1.17.0.1"; sha256="1gd6a47d6bcfd237s3g7r9rws8x2sg7zrvq5k6clpc41zdpp4712"; depends=[plyr Rcpp]; }; pRSR = derive2 { name="pRSR"; version="3.1.1"; sha256="1irx95b7cwvx3gpn9brjjn4k947m8frz542r18nilc9f1159mb3s"; depends=[]; }; pa = derive2 { name="pa"; version="1.2-1"; sha256="1pfgzxirkb0p8f6smjlrbp1qpsh0vsvqf306cvldaj9zx8cw0q9f"; depends=[ggplot2]; }; pacbpred = derive2 { name="pacbpred"; version="0.92.2"; sha256="13p405vh9rf1r5idxl5payc85vwlzcd87wm15163vc9gmil1ncsf"; depends=[]; }; pack = derive2 { name="pack"; version="0.1-1"; sha256="0x4p8clwp49s2y67y7in530xwhjngnqwagf9xnyb1jp0z3myd3r7"; depends=[]; }; packClassic = derive2 { name="packClassic"; version="0.5.2"; sha256="04a1sg9vx3r0sq54q9kj0kpahp6my246jy3bivgy09g5fjk0dmkj"; depends=[]; }; - packDAMipd = derive2 { name="packDAMipd"; version="0.1.2"; sha256="0fqpkwajxr4fl484c3yxjb0rzy41rxgz8lnvbcgybvm7alm9ysj9"; depends=[broom car data_table effects flexsurv ggplot2 gvlma IPDFileCheck lme4 lmtest MASS nlme relaimpo reshape2 rlang stringr survival survminer SurvRegCensCov systemfit tm valueEQ5D]; }; + packDAMipd = derive2 { name="packDAMipd"; version="0.2.2"; sha256="0n32vqpl6ym9wjwk8apsgkh7i4jin253l1v0gphvy2v1azcpyrc9"; depends=[broom car data_table dplyr effects flexsurv ggplot2 gvlma hash haven IPDFileCheck lme4 lmtest MASS nlme readxl relaimpo reshape2 rlang stringr survival survminer SurvRegCensCov systemfit tibble tidyr tidyverse tm valueEQ5D]; }; packHV = derive2 { name="packHV"; version="2.2"; sha256="0bj7zhlz2283y1hfdqdn7xil4wscwri1f5hszarwjwczx4n5sv81"; depends=[survival WriteXLS]; }; packMBPLSDA = derive2 { name="packMBPLSDA"; version="0.8.0"; sha256="0jn47zhcfssa2rwjh8jc2zc93g766pslxx8vjm0bsnzyzjl2yqb9"; depends=[ade4 DiscriMiner doParallel FactoMineR foreach MASS pROC]; }; packS4 = derive2 { name="packS4"; version="0.9.3"; sha256="0kkh4lfdbr2ydyfpymwrdkms1d4mj8430p6vxvj5wrgl4vh85gwd"; depends=[codetools]; }; packageDiff = derive2 { name="packageDiff"; version="0.1"; sha256="0qxgx2ac0x7p9j9clj7hgjahf7xwzcjkcw0d2n6w0r9c4g0mw9w2"; depends=[diffr htmlwidgets]; }; - packageRank = derive2 { name="packageRank"; version="0.3.5"; sha256="03yixgi5xj288fpjdgkywlpxl8d6llry0ppgavxrmm3w3nazwx5h"; depends=[cranlogs data_table ggplot2 memoise pkgsearch R_utils RCurl rversions]; }; + packageRank = derive2 { name="packageRank"; version="0.4.2"; sha256="112nnnf9av4ms02wp6cvbhnny81jij27hv9375rrvk7wv8dkmbrc"; depends=[cranlogs data_table ggplot2 memoise pkgsearch R_utils RCurl rversions sugrrants]; }; packagefinder = derive2 { name="packagefinder"; version="0.3.2"; sha256="1jskq7w26bjpam1hvyjcmmw08wz2qfzbyhxi5cdkfiiwqy15xkc1"; depends=[clipr crayon formattable htmlTable httr jsonlite lubridate pander reactable rstudioapi shiny shinybusy shinyjs stringr textutils tidyr]; }; - packager = derive2 { name="packager"; version="1.8.0"; sha256="0q93pv6sy9s852mnkzlp96dfpgxf1kbbm2yifq62ldifbmbncfaf"; depends=[callr checkmate codetools crayon cyclocomp desc fakemake git2r httr pkgbuild pkgload rcmdcheck remotes rhub rprojroot usethis whisker whoami withr]; }; + packager = derive2 { name="packager"; version="1.11.1"; sha256="0rr1jsimgcncpxd8vnqlbr0f8jddz6jks4g1qyylgxjyndivx298"; depends=[callr checkmate codetools crayon cyclocomp desc fakemake fritools fs gert httr pkgbuild pkgload rcmdcheck remotes rhub rprojroot whisker whoami]; }; packagetrackr = derive2 { name="packagetrackr"; version="0.1.1"; sha256="0xjq27j7bd7lps0vp9gdinxn19wl10k2cp9wb2xjih7p6l0wd57g"; depends=[dplyr httr magrittr rappdirs]; }; packcircles = derive2 { name="packcircles"; version="0.3.4"; sha256="05pv5c4k4njkr0xw6i6ksiy34hcyx2lbiqpv5gxw81yrkm0rxfyk"; depends=[Rcpp]; }; packer = derive2 { name="packer"; version="0.0.6"; sha256="0kskfkvpb5x6k3xjljlxjgzymarjsld8gmxq1pxkzmqwydxm1jx8"; depends=[assertthat cli fs htmlwidgets jsonlite rprojroot rstudioapi usethis]; }; - packrat = derive2 { name="packrat"; version="0.5.0"; sha256="1xy5dd2hrpqa07jfl4s7dsrya05mf36ms74j833scdz0zf89586n"; depends=[]; }; + packrat = derive2 { name="packrat"; version="0.6.0"; sha256="01cn2vf95nc8bh0hh8imkn030yra3hx64q1fb8jwsr52p9s397fr"; depends=[]; }; pacman = derive2 { name="pacman"; version="0.5.1"; sha256="0z7gngd6h83cpjhq1vg75wvzhdjbgjh7gj5d4zvvi9gd2lmagjcy"; depends=[remotes]; }; paco = derive2 { name="paco"; version="0.4.2"; sha256="0p02fdc5f7d7sbdvxill8jln76p1ndiw95k6s9j41slfriq647vd"; depends=[ape plyr vegan]; }; pacotest = derive2 { name="pacotest"; version="0.4.0"; sha256="1m52spl856agk5y00s6d7n07sjv775calgpksajdsn1ipjfxs5nk"; depends=[ggplot2 gridExtra numDeriv Rcpp RcppArmadillo VineCopula]; }; - pact = derive2 { name="pact"; version="0.5.0"; sha256="043hbydj5f6889xrfsrn8jrgid2nnbsz6d7jpn4hywwa97snw4ny"; depends=[glmnet survival]; }; + pacviz = derive2 { name="pacviz"; version="1.0.1"; sha256="0afh10zf32lk6gh42y6mjfgdw2blhjavhbq2n3s8h62w9blfad5g"; depends=[circlize e1071 plotrix]; }; padr = derive2 { name="padr"; version="0.5.3"; sha256="1kf457yrdwyl3vkc1y6bzlg8ag11pfzsrjqjnbp3v1vlx2ib4vz7"; depends=[dplyr lubridate Rcpp rlang]; }; paf = derive2 { name="paf"; version="1.0"; sha256="0wrqn67jfrjjxwcrkka6dljgi3mdk00vfjkzzcv2v7c97gx1zvwn"; depends=[survival]; }; pafdR = derive2 { name="pafdR"; version="1.0"; sha256="1yimsd4h23hcf752p5flda3dqk8hgn6qm9k0pmbapxj4jbsw14w5"; depends=[curl exams stringr]; }; pafr = derive2 { name="pafr"; version="0.0.2"; sha256="0ali4m1pv73y88x1dk5rvmg1ysy48janjnc1hnqfcndszfz2b0wm"; depends=[dplyr ggplot2 rlang stringr tibble]; }; - pagedown = derive2 { name="pagedown"; version="0.13"; sha256="0vr6bd2zbghn1v8fflwby59zc1rkya58g86jdrhy4vgpjcqf2wy0"; depends=[bookdown htmltools httpuv jsonlite later processx rmarkdown servr websocket xfun]; }; + pagedown = derive2 { name="pagedown"; version="0.14"; sha256="01r565x053cy7gncc26bdfl6fji2ammy2a8pbwhy70y7r425vvsz"; depends=[bookdown htmltools httpuv jsonlite later processx rmarkdown servr websocket xfun]; }; pagemap = derive2 { name="pagemap"; version="0.1.1"; sha256="1lf1ppifnnr7j63ii8ihi0x1rw1h7ls8nzxqnkmwnzha3dkhs4nz"; depends=[htmlwidgets]; }; - pagenum = derive2 { name="pagenum"; version="1.1"; sha256="0908rlr9sd1a2qwz0idw8ccxhji73sk24gyrdl071lpnd1rs2wl7"; depends=[]; }; + pagenum = derive2 { name="pagenum"; version="1.2"; sha256="0nid26wmrm76ifxqpqqry232q4alf80i7df1rg237qil8asx06k1"; depends=[]; }; pageviews = derive2 { name="pageviews"; version="0.5.0"; sha256="1fhlm2y288wx625y0glxybjb0xv9sqvvln35jqlwqq38h3grcpqd"; depends=[curl httr jsonlite]; }; + pagoda2 = derive2 { name="pagoda2"; version="1.0.3"; sha256="1p0chdlsycb3040lg22jqd3r0qivava2wx797rmiz7q6ms30npi9"; depends=[dendsort drat fastcluster igraph irlba magrittr MASS Matrix mgcv N2R plyr R_utils R6 Rcpp RcppArmadillo RcppEigen RcppProgress rjson rlang RMTstat Rook Rtsne sccore urltools]; }; + pagoo = derive2 { name="pagoo"; version="0.3.8"; sha256="07m8gg5qks7k65dc9xk0zgzznqbn3v3wr2pn2fk79lmy86m224af"; depends=[BiocGenerics Biostrings dendextend DT GenomicRanges ggfortify ggplot2 heatmaply magrittr plotly R6 reshape2 S4Vectors shiny shinydashboard shinyWidgets vegan]; }; painter = derive2 { name="painter"; version="0.1.0"; sha256="0qr6p13h50rlavcsamxmijfr4dfrbv1k088m28qf8a4gam3ap85b"; depends=[]; }; paintmap = derive2 { name="paintmap"; version="1.0"; sha256="1qw5725yjymxmfhffqjx4lbmzj437c7qwr8xrzmf52f0m28nl3vk"; depends=[]; }; pairedCI = derive2 { name="pairedCI"; version="0.5-4"; sha256="03wf526n3bbr2ai44zwrdhbfx99pxq1nbng9wsbndrdg2ji4dar2"; depends=[]; }; pairheatmap = derive2 { name="pairheatmap"; version="1.0.1"; sha256="1awmqr5n9gbqxadkblpxwcjl9hm73019bwwfwy1f006jpn050d6l"; depends=[]; }; pairsD3 = derive2 { name="pairsD3"; version="0.1.0"; sha256="0ql6pqijf24pfyid52hmf5fmh4w1ca3sm47z9vknqpnjbn47v8q2"; depends=[htmlwidgets shiny]; }; - pairwise = derive2 { name="pairwise"; version="0.5.0-1"; sha256="09knyw09qxccjjrywrk7bvqds4xpim77gsl9hs1hbfa641g82z1c"; depends=[]; }; + pairwise = derive2 { name="pairwise"; version="0.5.0-2"; sha256="1h1rqh3c40am73zsg4k8zwb14jipjl2pn2znippsnz3sn6plvm8g"; depends=[]; }; pairwiseCI = derive2 { name="pairwiseCI"; version="0.1-27"; sha256="0yp9nibdrsddjqq6vdlfbpvmfgm209h99b6qqqd6wgfzng327822"; depends=[boot coin MASS MCPAN mcprofile]; }; - pairwiseComparisons = derive2 { name="pairwiseComparisons"; version="3.1.1"; sha256="13x870ld98s9dsbzi39y4yc9h550a1nhmh2qcz82a4iqi6x1v14n"; depends=[BayesFactor dplyr ipmisc parameters PMCMRplus purrr rlang WRS2]; }; + pairwiseComparisons = derive2 { name="pairwiseComparisons"; version="3.1.5"; sha256="1nxmadamc7411jwif3rxprsvnc3j6n5dwzz20f3gacc18k9arxk6"; depends=[BayesFactor dplyr insight ipmisc parameters PMCMRplus purrr rlang WRS2]; }; pak = derive2 { name="pak"; version="0.1.2.1"; sha256="07x5wa7mkhlzyl6hih9wv91ykjanhh35ng3p439wmxgz6dcdv6sp"; depends=[assertthat base64enc callr cli cliapp crayon curl desc filelock glue jsonlite lpSolve pkgbuild pkgcache prettyunits processx ps R6 rematch2 rprojroot tibble]; }; palaeoSig = derive2 { name="palaeoSig"; version="2.0-3"; sha256="1sn2nbiq037l81qvrqbg7gf1312g8vy574hsfng07qk1jpx7vwkk"; depends=[assertr dplyr forcats ggplot2 ggrepel magrittr MASS mgcv purrr rioja rlang TeachingDemos tibble tidyr vegan]; }; - palasso = derive2 { name="palasso"; version="0.0.7"; sha256="1r7kcx0i1xqvqpqwvh5khsv3g0hj3j8f56q9jbya18scywk2ivzg"; depends=[glmnet Matrix survival]; }; + palasso = derive2 { name="palasso"; version="0.0.8"; sha256="0cgxfzhp394c8xprc2k0qx9c274bbp0cpazk7xilfrgcgk08156i"; depends=[glmnet Matrix survival]; }; paleoMAS = derive2 { name="paleoMAS"; version="2.0-1"; sha256="1hhb5wbj4m3ch8wnvd1zkl5bk6wa9nl6jl1dhm4z6yqkh29yn9z6"; depends=[lattice MASS vegan]; }; paleoTS = derive2 { name="paleoTS"; version="0.5.2"; sha256="1hd143xw16n8xhicfr6nfyfm6kyr56gyiq5vqnfzhmndjrvkpkx7"; depends=[doParallel foreach iterators mnormt]; }; paleobioDB = derive2 { name="paleobioDB"; version="0.7.0"; sha256="0hgf0ns4mp2war254ysb9rcm4kij1d3xrwkr4s4n2h5in8dz23iq"; depends=[gtools maps plyr raster RCurl rjson scales]; }; paleofire = derive2 { name="paleofire"; version="1.2.4"; sha256="1vgai4my6kl0fldghp6a1qr8xhxiyw137kd80d0zir6q47nlnc2x"; depends=[GCD ggplot2 lattice locfit plyr raster rgdal]; }; paleomorph = derive2 { name="paleomorph"; version="0.1.4"; sha256="05l55miahkmj8ikq8qz20y6kgxvxmdf04kji898i7fp8qyj4vfpa"; depends=[]; }; + paleopop = derive2 { name="paleopop"; version="2.1.1"; sha256="1gpq66v538y5a7hjl8s985cz95kszzfghi0c7hsbdgym2j580mm8"; depends=[poems R6 sf trend]; }; paleotree = derive2 { name="paleotree"; version="3.3.25"; sha256="04l7mh198sm1j8b75ydm7sq55l3nnwns29wj8cli4n3m009bjr5a"; depends=[ape jsonlite phangorn phytools png RCurl]; }; - paletteer = derive2 { name="paletteer"; version="1.2.0"; sha256="1bpqdin6amq7dg36hjk4yhm6spc98m1m0l3jx7m3gfhy29vx65cl"; depends=[prismatic rematch2 rlang rstudioapi]; }; + paletteer = derive2 { name="paletteer"; version="1.3.0"; sha256="11xlqx3mr71iij7lagddgd20s9qvhfmr5f9zvjfg63vfjiinw6sv"; depends=[prismatic rematch2 rlang rstudioapi]; }; palettesForR = derive2 { name="palettesForR"; version="0.1.2"; sha256="0nkb0dszj3a9ba7w6kfyn8lxacqsjw60i87p3g2gyl098kjwv7qv"; depends=[]; }; palettetown = derive2 { name="palettetown"; version="0.1.1"; sha256="1kjj1sqib1ns7895plp8c7h317pxwbyxi2shjkcgadkcsv2yjsxn"; depends=[]; }; palinsol = derive2 { name="palinsol"; version="0.93"; sha256="0k29sl2j7yf4yc0dhb047rxwg9np9l6pdwv6wyb4j80yc07vc9am"; depends=[gsl]; }; @@ -12359,10 +12854,10 @@ in with self; { palmerpenguins = derive2 { name="palmerpenguins"; version="0.1.0"; sha256="0q1k3cdkliq7kwrg1n0vs9b6cjwyfarhlgdijhp9c6riy6y5ik7x"; depends=[]; }; palmtree = derive2 { name="palmtree"; version="0.9-1"; sha256="06438wla5zm2s8vgip15lfy5gmhwh3wkiak8hsylc8zzkvn698cn"; depends=[Formula partykit]; }; palr = derive2 { name="palr"; version="0.2.0"; sha256="0c9fg3kbl2n6m01ck2pmavgxbk953vdxqsc3cw6phnnav93kr5cf"; depends=[]; }; - pals = derive2 { name="pals"; version="1.6"; sha256="18bl15figc9mhlvxz71da6s2mzyja6rdb2cpm6h5vya1lpv3snmk"; depends=[colorspace dichromat mapproj maps]; }; + pals = derive2 { name="pals"; version="1.7"; sha256="18pbivmqs9yqsb6p8anv42alny0njaq3dajibhzysax0b7rsk2js"; depends=[colorspace dichromat mapproj maps]; }; pamctdp = derive2 { name="pamctdp"; version="0.3.2"; sha256="0qs8lj5g2fx5rfd0afv76x9x7wqm333qmjv6zzip6pf11dzkghyj"; depends=[ade4 FactoClass xtable]; }; pamm = derive2 { name="pamm"; version="1.121"; sha256="191f0g90s1m3w68mszmdsdv5yw7xd1vsdbwsfvmyydgxn4261pwk"; depends=[lattice lme4 lmerTest mvtnorm]; }; - pammtools = derive2 { name="pammtools"; version="0.5.4"; sha256="013flafl4h7j52jmp0l9sf6s3bp149xfa1r302ywgclxfkknif9w"; depends=[checkmate dplyr Formula ggplot2 lazyeval magrittr mgcv mvtnorm pec purrr rlang survival tibble tidyr vctrs]; }; + pammtools = derive2 { name="pammtools"; version="0.5.6"; sha256="1d54zyh3vnfwrliawz7pqbfd4bp8q5bzl5rl1jnmdl8b3li9yn1f"; depends=[checkmate dplyr Formula ggplot2 lazyeval magrittr mgcv mvtnorm pec purrr rlang survival tibble tidyr vctrs]; }; pampe = derive2 { name="pampe"; version="1.1.2"; sha256="092n04nrp886kd163v32f5vhp9r7gnayxzqb6pj57ilm5w1yrcsk"; depends=[leaps]; }; pamr = derive2 { name="pamr"; version="1.56.1"; sha256="0ycpgkk23y3zzkb42n2skcyl35ps1n7jmyzfj7pbxr3f6gr2grfh"; depends=[cluster survival]; }; pan = derive2 { name="pan"; version="1.6"; sha256="1dk3jjj826p7xrz10qz04vyc068xnypg7bp0pj4c32z3da0xzh5d"; depends=[]; }; @@ -12372,24 +12867,28 @@ in with self; { panelView = derive2 { name="panelView"; version="1.1.2"; sha256="0kbh2g8yynv2mvvndy89lkm5yhy2hr04z52i2ccv9yfrkyignlfp"; depends=[ggplot2 gridExtra]; }; panelWranglR = derive2 { name="panelWranglR"; version="1.2.13"; sha256="0zj0m08518zi6xsa7qik61ys1qqa2lqiar4l7acclkw58w5zrmbc"; depends=[caret data_table Hmisc]; }; panelaggregation = derive2 { name="panelaggregation"; version="0.1.1"; sha256="0x8ldqb9216pclfvs4ymdpian43v2ydkyflpf0k6lcn35r04xfr6"; depends=[data_table]; }; - panelvar = derive2 { name="panelvar"; version="0.5.2"; sha256="1rr7d0cyz6afxhwqslvcnbfb03cizpfldzwsfnkzxqmxpqasbw80"; depends=[ggplot2 knitr MASS Matrix matrixcalc progress reshape2 texreg]; }; + panelr = derive2 { name="panelr"; version="0.7.5"; sha256="00k0ylryrzg0zkda192i2c04cj4rh12r9pa07hy202vv9clfqjsw"; depends=[crayon dplyr Formula ggplot2 jtools lme4 lmerTest magrittr purrr rlang stringr tibble]; }; + panelvar = derive2 { name="panelvar"; version="0.5.3"; sha256="1ckllb14k2xrnbwi5z84f6003f61vdbw0wcsa4vsma0yp4iybh0q"; depends=[ggplot2 knitr MASS Matrix matrixcalc progress reshape2 texreg]; }; pangaear = derive2 { name="pangaear"; version="1.0.0"; sha256="0i7k1sdhslw33dzpnrmajynq52svg8ri4mxz6aww2cah9y8vxlzl"; depends=[crul hoardr jsonlite oai png tibble xml2]; }; papayar = derive2 { name="papayar"; version="1.0"; sha256="11vkjhazfwfixsr6dba5jrcsr3r3mqgvj5s070b4gp70d6k1z8s5"; depends=[htmltools neurobase oro_nifti servr]; }; - papeR = derive2 { name="papeR"; version="1.0-4"; sha256="1sc336haqsx6825g7m0z3a4pjklrmnzkq4995dpqwhvdvcikk9jd"; depends=[car gmodels xtable]; }; + papeR = derive2 { name="papeR"; version="1.0-5"; sha256="095qfgv6h3sl5p69gm1v0qh9axap8gq2a9a3v95688fia2ppym4x"; depends=[car gmodels xtable]; }; paperplanes = derive2 { name="paperplanes"; version="0.0.1.9"; sha256="1d9grc95xqxn91lvk8v7w3z90bhl8savkhihwshyjp8ij2xpzfkl"; depends=[]; }; parSim = derive2 { name="parSim"; version="0.1.4"; sha256="0iswcw52skx1hxb9bv9ihhwwyybprsk2615pmijsxp0bkzgsjc88"; depends=[dplyr pbapply snow]; }; parade = derive2 { name="parade"; version="0.1"; sha256="07x02j9jlldz4p0cyhw292041l3pziv56bhbzp4f0qpxhcbn5zn4"; depends=[]; }; - paradox = derive2 { name="paradox"; version="0.6.0"; sha256="1zv0q411wcwigkf4yggs3w2gz48lvv3jhnrddrv40qih8b70ywi3"; depends=[backports checkmate data_table mlr3misc R6]; }; + paradox = derive2 { name="paradox"; version="0.7.1"; sha256="1difp0bzsfxcmbm1snahh3i6417k1a2w4mnjx65p20n2yiclmrgs"; depends=[backports checkmate data_table mlr3misc R6]; }; parallelDist = derive2 { name="parallelDist"; version="0.2.4"; sha256="0gqf9vi9hlbflxj941jv7hli8jiy2sqg8b312h401f8rkfqa9ckv"; depends=[Rcpp RcppArmadillo RcppParallel]; }; parallelML = derive2 { name="parallelML"; version="1.2"; sha256="05j0rb81i8342m8drwgmgi1w30q96yf501d83cdq4zhjbchphbl1"; depends=[doParallel foreach]; }; parallelMap = derive2 { name="parallelMap"; version="1.5.0"; sha256="0kjyskwvkqvsyjq55rhypif6z92r33llb7krrhc9f9w68xzp5yja"; depends=[BBmisc checkmate]; }; + parallelPlot = derive2 { name="parallelPlot"; version="0.1.0"; sha256="1zppgd0dwxfryv6wfl6k7jrny1yqb5q4f8phnnmzz9ydlv7xyv32"; depends=[htmlwidgets]; }; parallelSVM = derive2 { name="parallelSVM"; version="0.1-9"; sha256="0nhxkllpjc3775gpivj8c5a9ssl42zgvswwaw1sdhwg3cxcib99h"; depends=[doParallel e1071 foreach]; }; - parallelly = derive2 { name="parallelly"; version="1.22.0"; sha256="1nms5zaa83274qz98g03s0w6qch7ibjzz8h7b2p5irbqw61cwwgd"; depends=[]; }; + parallelly = derive2 { name="parallelly"; version="1.25.0"; sha256="0adcyd8da25q3z8b9wgia4kzjm7mxrjwjs68gxc5ljw1ib0prjwi"; depends=[]; }; + param6 = derive2 { name="param6"; version="0.1.0"; sha256="0194l3imnr6di219cyhyqkjywfnda2m29pspc29x9d8q5v7ycfzk"; depends=[checkmate data_table R6 set6]; }; paramGUI = derive2 { name="paramGUI"; version="2.1.4"; sha256="0k2wkl99ji3w7xmd9k7zzvrr3dbf3237q7lxm527dnrq331pmxmi"; depends=[colorspace fields shiny shinydashboard TIMP]; }; - parameters = derive2 { name="parameters"; version="0.10.1"; sha256="1xvjvsdd0hql209f7v2l1nw7gy8jkj5qp0699p5m2h55a01jl778"; depends=[bayestestR insight]; }; + parameters = derive2 { name="parameters"; version="0.13.0"; sha256="17dlwx9hrl6z2il14nxji0snwsf4sfbp3mv33jbpcw13sani1q81"; depends=[bayestestR insight]; }; paramhetero = derive2 { name="paramhetero"; version="0.2.0"; sha256="16gvs8328bnqvhx47f0xwnmbmlakxmp4ivnjxk2b13z6qjs70ij4"; depends=[ggplot2 ggpubr lme4 survey]; }; paramlink = derive2 { name="paramlink"; version="1.1-2"; sha256="0y6wsrxwyavipmrjjznr2n920w0p6qlwapxc9mnkh9c6w3yznka2"; depends=[assertthat kinship2 maxLik]; }; - params = derive2 { name="params"; version="0.6.1"; sha256="0w7k8k7z8p1y2w0dhpfssa868xaikfzfdjw2vlj1yl299k5yisax"; depends=[whisker]; }; + paramlink2 = derive2 { name="paramlink2"; version="1.0.3"; sha256="0ypn0fdrphblw64sdnfmyf9q4zbakqvl4xzr451phvhx52n1gb73"; depends=[pedprobr pedtools]; }; + params = derive2 { name="params"; version="0.7.3"; sha256="0zii9nxgl2z46vyqn2l0kdjmib90534ybpizck74mp2wp1vh9ndj"; depends=[glue purrr RcppTOML readr whisker]; }; paramtest = derive2 { name="paramtest"; version="0.1.0"; sha256="0yn1s1qkgby8x0qn7cy1zhxzc0wyi7bm30pkvijhn5h5afjpylsy"; depends=[boot]; }; paran = derive2 { name="paran"; version="1.5.2"; sha256="0d9la83mxfpfgdfrqa40ck5fcp3j2b70d8c8nl9wmdsgvgqrl23s"; depends=[MASS]; }; parboost = derive2 { name="parboost"; version="0.1.4"; sha256="087b4as0w8bckwqpisq9mllvm523vlxmld3irrms13la23z6rjvf"; depends=[caret doParallel glmnet iterators mboost party plyr]; }; @@ -12402,30 +12901,31 @@ in with self; { parmigene = derive2 { name="parmigene"; version="1.1.0"; sha256="067rqxqyzy1fsjj0s1g7af4527whwdhzjzc5b8a8n7683na59ns4"; depends=[]; }; parmsurvfit = derive2 { name="parmsurvfit"; version="0.1.0"; sha256="0d3614q76dw3f7y9p8378hdny7bz5fymma5l0zpygr1cfnacdhh6"; depends=[fitdistrplus flexsurv ggplot2]; }; paropt = derive2 { name="paropt"; version="0.1"; sha256="0934apc1paxsdahf7zywj4aaii7zmgfff7crpjvlmjg4x0pq390v"; depends=[Rcpp RcppArmadillo]; }; + parseRPDR = derive2 { name="parseRPDR"; version="0.0.2"; sha256="14a8x0wb9lyzvzbjmsrixx4vc2cmq60qlz1y0647zac6f6s3a50g"; depends=[bigmemory data_table doParallel foreach stringr]; }; parsec = derive2 { name="parsec"; version="1.2.3"; sha256="142zxj34qsf0s537bcabf04yi2qfmy65bgczpkvbyv5vkajxl10v"; depends=[igraph netrankr]; }; - parsedate = derive2 { name="parsedate"; version="1.2.0"; sha256="0gb3w6hmwxayhijpf36p5dk4h6bbdps57x3cgikwvvxkgi83rarr"; depends=[rematch2]; }; - parsetools = derive2 { name="parsetools"; version="0.1.3"; sha256="1d18cdaw90g3362218d5i1j8n30p46drjygfri79sqgxhidb25sz"; depends=[]; }; - parsnip = derive2 { name="parsnip"; version="0.1.4"; sha256="1134840xisvkkrbkh5kvx24vxp7sx06124svy573a9m4h8c492sr"; depends=[dplyr generics globals glue magrittr prettyunits purrr rlang tibble tidyr vctrs]; }; + parsedate = derive2 { name="parsedate"; version="1.2.1"; sha256="05l6f1n3dsm383w7jfg3j38klvmzzfvc7qi9zr5ij13rljj8s1vb"; depends=[rematch2]; }; + parsnip = derive2 { name="parsnip"; version="0.1.5"; sha256="0c12lyfxqsdprqlcmgy421py38z28h88d68pxb1c4fw14v1c2d06"; depends=[dplyr generics globals glue magrittr prettyunits purrr rlang tibble tidyr vctrs]; }; partDSA = derive2 { name="partDSA"; version="0.9.14"; sha256="1kp0cdsdjiay349jz22iqfzvspny8s343cfan8xahgf931k9h8p6"; depends=[survival]; }; + partR2 = derive2 { name="partR2"; version="0.9.1"; sha256="06ky0hhrq0mcsn9rwrzvwn0rrjj0l8rxs0hqp10668gdq5hjk8bn"; depends=[dplyr ggplot2 lme4 magrittr pbapply purrr rlang tibble tidyr]; }; partialAR = derive2 { name="partialAR"; version="1.0.12"; sha256="0fv1ffgqdbl04b4cmfmvzwah8ms9cxx3dsdralkk92bxxhybcjsl"; depends=[data_table ggplot2 KFAS MASS plot3D Rcpp tseries urca zoo]; }; partialCI = derive2 { name="partialCI"; version="1.2.0"; sha256="0hi936yg4g5bg61ix2i68f8q4c5nvvshl2728ynz1rl970qfcrp7"; depends=[data_table ggplot2 glmnet KFAS MASS partialAR Rcpp TTR zoo]; }; partialOR = derive2 { name="partialOR"; version="0.9"; sha256="02vbvln8lswysaafpxq5rxb6crp7yhlc13i42kybv8fr10jaagjj"; depends=[nnet]; }; particles = derive2 { name="particles"; version="0.2.2"; sha256="0pncfpk89hsfjch8h5b86rx7hsgdyg9bsxc54f5bf0y8gh9v98qj"; depends=[digest dplyr igraph magrittr mgcv Rcpp rlang tidygraph]; }; - partition = derive2 { name="partition"; version="0.1.2"; sha256="0yjf000ky34lyl8b7mdya5svz3rbih3irfzhj53faca3g2y6xy0x"; depends=[crayon dplyr forcats ggplot2 infotheo magrittr MASS pillar purrr Rcpp RcppArmadillo rlang stringr tibble tidyr]; }; + partition = derive2 { name="partition"; version="0.1.3"; sha256="1q6ghrvykh5zgk210qf0cavn5iygs51hzbgm2ny85nzyqvhcjkdf"; depends=[crayon dplyr forcats ggplot2 infotheo magrittr MASS pillar purrr Rcpp RcppArmadillo rlang stringr tibble tidyr]; }; partitionBEFsp = derive2 { name="partitionBEFsp"; version="1.0"; sha256="0rirqk9v5jbjs2jpjjkg7kvay9f093q2gwx5fx3bm9b0f5869w1b"; depends=[]; }; partitionComparison = derive2 { name="partitionComparison"; version="0.2.5"; sha256="0wzg2r4c61fd3cp8kwsc313gwcizh5aavw361lc9gqn57p1kml1j"; depends=[lpSolve Rdpack]; }; partitionMap = derive2 { name="partitionMap"; version="0.5"; sha256="0pi066xaaq0iqr0d7cncdzjd7bacmgrivc4qvhqx0y7q1vifrdjm"; depends=[randomForest]; }; partitionMetric = derive2 { name="partitionMetric"; version="1.1"; sha256="1wry9d3s814yp79ayab7rzf8z5l2mwpgnrc5j7d2sac24vp4pd48"; depends=[]; }; - partitions = derive2 { name="partitions"; version="1.9-22"; sha256="1qqy4df28wy4q0g572azrj171jlhvrnzbh7x0wr2g7v6gr20y0ns"; depends=[gmp polynom sets]; }; + partitions = derive2 { name="partitions"; version="1.10-2"; sha256="1bckdl6alqi6y7ri3qr2pz9zzqgs167c73bhnwbq4jk0mpxwbgg6"; depends=[gmp mathjaxr polynom sets]; }; partools = derive2 { name="partools"; version="1.1.6"; sha256="0w7p88y4ab4v14k16k95cyb5f3yl2g6ban11775rmi2h9xqkfxk8"; depends=[data_table pdist regtools]; }; partsm = derive2 { name="partsm"; version="1.1-3"; sha256="17md3j41knscllckiqnvkqvf2v0fgsig101vgg6z5ic1yzvzfxgs"; depends=[]; }; - party = derive2 { name="party"; version="1.3-5"; sha256="0r0kslgynfzir7rpc6zsm0a1qmi64gg84drbaihq6janzv9kafhw"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; - partykit = derive2 { name="partykit"; version="1.2-11"; sha256="00n6a74x257m2jk7jadjfxaclihxqpqwh356bgxmq8rag0nk70rs"; depends=[Formula inum libcoin mvtnorm rpart survival]; }; + party = derive2 { name="party"; version="1.3-7"; sha256="1pwk7zsz05w4nk68b2gr0p4mgmk6nkkw82m9gdm8m1zbldj6277h"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; + partykit = derive2 { name="partykit"; version="1.2-13"; sha256="15bfhqvx2y4vclnc3sw4v7ggs70pk57b3qk9aqjfvdrx444d2gd4"; depends=[Formula inum libcoin mvtnorm rpart survival]; }; parviol = derive2 { name="parviol"; version="1.1"; sha256="1sfgic86ssd5wjf9ydss9kjd3m4jmm2d1v896sjsv8bydwymbpx3"; depends=[vioplot]; }; - parzer = derive2 { name="parzer"; version="0.3.0"; sha256="1rqig00a98dg1sn0h133js345hpcxbg93p6drc16a15an39rkkjr"; depends=[Rcpp]; }; + parzer = derive2 { name="parzer"; version="0.4.0"; sha256="1lm48yd6i7n9xfysv379c94274h7j93bms5myl9kj6zk7b0gssl3"; depends=[Rcpp withr]; }; pass_lme = derive2 { name="pass.lme"; version="0.9.0"; sha256="1rxm509vnkdvdxii4jwniirdb2pv90rjkf6wjc9zrjh88jrl678k"; depends=[]; }; passport = derive2 { name="passport"; version="0.3.0"; sha256="176pkc7x76339bawdwywdcmiynzzlrwr91fgf5q0rq7asd9nc7d1"; depends=[]; }; - passt = derive2 { name="passt"; version="0.1.1"; sha256="03ymx1bvbz2qwlkxb5iis6k3d3d5fivhcz1w23fwqhgq976zrdj2"; depends=[dplyr magrittr rlang tidyr]; }; + passt = derive2 { name="passt"; version="0.1.3"; sha256="0yphnw38wwv303lkbfj2y3fwfjnd8l7gyi60c7xaj6qwy4y5ww8k"; depends=[dplyr magrittr rlang tidyr]; }; password = derive2 { name="password"; version="1.0-0"; sha256="1ijzqdw54l8wvpy6ys28njvhplzjxzzi5i9y41vjnrr88n13977v"; depends=[]; }; pastecs = derive2 { name="pastecs"; version="1.3.21"; sha256="0z4dic94ar646w7zc2ggi5hgvf2qnznsani94c5pyql8zspz47lc"; depends=[boot]; }; pastis = derive2 { name="pastis"; version="0.1-2"; sha256="0211pzj3xrmqgxjpspij95kmlpa2klpicw49n6pnz2g1fapjy2bd"; depends=[ape caper]; }; @@ -12433,10 +12933,11 @@ in with self; { patchDVI = derive2 { name="patchDVI"; version="1.10.1"; sha256="14zhl2skj20gc09ycrycdq2slqrpbh6nf0lcsxf55kvshnwnmknc"; depends=[]; }; patchSynctex = derive2 { name="patchSynctex"; version="0.1-4"; sha256="1li3kw7a77sx6dss8pnxzb0p0sdy1kfm1zdnmhhj043zihrryd5p"; depends=[stringr]; }; patchwork = derive2 { name="patchwork"; version="1.1.1"; sha256="10glgkf58lcykcwda1hj6xdps02m3i247qynk6s2jmwljagps3fg"; depends=[ggplot2 gtable]; }; + patentr = derive2 { name="patentr"; version="0.1.0"; sha256="1jxm45a97v160kqv39041jwy9083iya41g8kvp7k4a8g3b7ga87w"; depends=[data_table dplyr lubridate magrittr Rcpp rlang]; }; patentsview = derive2 { name="patentsview"; version="0.2.2"; sha256="003pcddz6adsh893xvlb9d72r316z14nlp3fwm1vbc50hpa24w6z"; depends=[httr jsonlite]; }; path_chain = derive2 { name="path.chain"; version="0.2.0"; sha256="1p28mcar4krgvkgn02xrlwcpzchnppn2l2k2iwh511c3qrfpy653"; depends=[logger rlang stringi]; }; pathdiagram = derive2 { name="pathdiagram"; version="0.1.9.1"; sha256="018frv1n3x0bf1682jibnm5k2dlkg85xa9mps28l22a0z8bplbv5"; depends=[shape]; }; - pathfindR = derive2 { name="pathfindR"; version="1.6.0"; sha256="0v3474dq26f9nax1mdcqhdka9g7wn5qb8frpdn4lp5mgbwhki9i1"; depends=[AnnotationDbi DBI doParallel foreach fpc ggplot2 ggraph ggupset igraph KEGGgraph KEGGREST knitr magick msigdbr org_Hs_eg_db pathfindR_data R_utils rmarkdown]; }; + pathfindR = derive2 { name="pathfindR"; version="1.6.1"; sha256="1hc0vrj0bszgpxgjvn0rspa4xb6023lzwvzlh0vm3jswh56vq6j1"; depends=[AnnotationDbi DBI doParallel foreach fpc ggplot2 ggraph ggupset igraph KEGGgraph KEGGREST knitr magick msigdbr org_Hs_eg_db pathfindR_data R_utils rmarkdown]; }; pathfindR_data = derive2 { name="pathfindR.data"; version="1.1.1"; sha256="1f4lp3m4c92dks14nxj5h8z609jgx5fhnyy1ng9n842rxry4s9ks"; depends=[]; }; pathlibr = derive2 { name="pathlibr"; version="0.1.0"; sha256="0z8iz765fi1s2770p7dwwv2anihfw86kb5dwg081wb6474wiq6v8"; depends=[glue logging magrittr purrr R6 rlang]; }; pathmapping = derive2 { name="pathmapping"; version="1.0.2"; sha256="0kx4wxf6lhi58sif8fzr5w4wa0i5253fq4v0ynp721fv1hkvmhvz"; depends=[]; }; @@ -12447,21 +12948,21 @@ in with self; { patternize = derive2 { name="patternize"; version="0.0.2"; sha256="0hd6l66ybrjjndad5m2li9qqsjd0k2blhvjm469j6ab95073zq9f"; depends=[abind dplyr imager magrittr Morpho purrr raster rgdal RNiftyReg sp vegan]; }; patternplot = derive2 { name="patternplot"; version="1.0.0"; sha256="0n4y23g894amwi62lx10k15i28rsmiaw52bds8dzmvkykkp9mm8q"; depends=[dplyr ggplot2 gridExtra gtable jpeg png R6 Rcpp RcppParallel]; }; pauwels2014 = derive2 { name="pauwels2014"; version="1.0"; sha256="1b7whn13lgydc69kg1fhnwkxirw0nqq75cfvii0yg0j4p8r1lw42"; depends=[deSolve ggplot2]; }; - pavo = derive2 { name="pavo"; version="2.6.1"; sha256="1qpdgj0jn64rp9z7hhki52zs6309lpxdibbciwwnx77fys91l3v6"; depends=[cluster future_apply geometry lightr magick plot3D progressr sp viridisLite]; }; + pavo = derive2 { name="pavo"; version="2.7.0"; sha256="1l0ak184gb7vpf7zxn8wja1y6mmdnmsp26r7jsga51i818hl25dp"; depends=[cluster farver future_apply geometry lightr magick plot3D progressr sp viridisLite]; }; pawacc = derive2 { name="pawacc"; version="1.2.2"; sha256="0d5k0bq8zmb7sjvba3ljp97mba2iycnw44rnsnn2aajs02l1c2xg"; depends=[SparseM]; }; - paws = derive2 { name="paws"; version="0.1.9"; sha256="1z7brgfja55ahn9wlsbj2lyb1x12x9ac7j4w81gmkwrm1pmjqldw"; depends=[paws_analytics paws_application_integration paws_compute paws_cost_management paws_customer_engagement paws_database paws_machine_learning paws_management paws_networking paws_security_identity paws_storage]; }; - paws_analytics = derive2 { name="paws.analytics"; version="0.1.9"; sha256="03pjswa2xxm693wm2q2gqyl57i2hs8vzvklwd0qxac1mz3hylsg0"; depends=[paws_common]; }; - paws_application_integration = derive2 { name="paws.application.integration"; version="0.1.9"; sha256="1y9q4sswl8c3amj2rvgzc3xbvyjfd9b9n7ixmkig078bvi4rg4gw"; depends=[paws_common]; }; - paws_common = derive2 { name="paws.common"; version="0.3.6"; sha256="08hib48lrk5siv5drrc8c3pah9vcajv75nfmzcv69q28vng8h1yk"; depends=[base64enc digest httr ini jsonlite xml2]; }; - paws_compute = derive2 { name="paws.compute"; version="0.1.9"; sha256="1ha8jbz13vzr6qgz28sazfnm0f34wgllmns97zzm2wi4z6x8dqr6"; depends=[paws_common]; }; - paws_cost_management = derive2 { name="paws.cost.management"; version="0.1.9"; sha256="0dwk73i1xg0i0kn6vyzl880c18imwj57jhhjwklfa95x4p5cf0mr"; depends=[paws_common]; }; - paws_customer_engagement = derive2 { name="paws.customer.engagement"; version="0.1.9"; sha256="0vljkfj133q5mdvmq9dm8yvk8f4mgxhs8pz7shc9ym2bvd7nlffn"; depends=[paws_common]; }; - paws_database = derive2 { name="paws.database"; version="0.1.9"; sha256="0m04pp0fa8ssdwkp6wfmshcxi8qifz76pia4pz54kypiz60y02rs"; depends=[paws_common]; }; - paws_machine_learning = derive2 { name="paws.machine.learning"; version="0.1.9"; sha256="03qdd3w513b96shh335b3giq368fac9i12xfbawlq9wc3hj6b72x"; depends=[paws_common]; }; - paws_management = derive2 { name="paws.management"; version="0.1.9"; sha256="19nr4bc35hmyqpy33gj5pgr3hqv220a7nfzha5hgdd6njsmzfyxn"; depends=[paws_common]; }; - paws_networking = derive2 { name="paws.networking"; version="0.1.9"; sha256="18r74vi5a8j3fks61gsmwkzbd4bfp8hcfzzwy7dh1sn7536b8jqp"; depends=[paws_common]; }; - paws_security_identity = derive2 { name="paws.security.identity"; version="0.1.9"; sha256="1nkr5qcn3prw2q694w7phqfqbildp2ymd14lvdv7lrzmz2lb37wz"; depends=[paws_common]; }; - paws_storage = derive2 { name="paws.storage"; version="0.1.9"; sha256="0df5gaj07iva38mj1yz39xy8hhf08wkwlrzmn99l9bppqzbpajy9"; depends=[paws_common]; }; + paws = derive2 { name="paws"; version="0.1.11"; sha256="1pkwjdrziyh6bhpilx29zsv2nmv60z6fqxgx2kvjqvl8z36yqfhw"; depends=[paws_analytics paws_application_integration paws_compute paws_cost_management paws_customer_engagement paws_database paws_machine_learning paws_management paws_networking paws_security_identity paws_storage]; }; + paws_analytics = derive2 { name="paws.analytics"; version="0.1.11"; sha256="024ffpzn77kr45xk2mj6slhjlpm6d7sg4j7aivph3a36qjfw3ac4"; depends=[paws_common]; }; + paws_application_integration = derive2 { name="paws.application.integration"; version="0.1.11"; sha256="1vywqgn1x3dmgx8xaaigg58f8r0rk2h1rhlaxr5nh57mapgwdpa7"; depends=[paws_common]; }; + paws_common = derive2 { name="paws.common"; version="0.3.9"; sha256="06mky5kmjqq3ra9ra42xc23ik0ihc08is5qik4rgb614yx64rn4q"; depends=[base64enc digest httr ini jsonlite xml2]; }; + paws_compute = derive2 { name="paws.compute"; version="0.1.11"; sha256="0jfw6mhk040kxnvnw79y7s6b3npxchdxnzkd6h6abxy265d59my2"; depends=[paws_common]; }; + paws_cost_management = derive2 { name="paws.cost.management"; version="0.1.11"; sha256="0hbs1zp98mimwshab4vip4nayb7fga8r06mcmk93jnbq9a4gblxa"; depends=[paws_common]; }; + paws_customer_engagement = derive2 { name="paws.customer.engagement"; version="0.1.11"; sha256="0pzbkgrpqsljvsmhyz78rzhih4dii04isn7i4ldch4hbn6syab4v"; depends=[paws_common]; }; + paws_database = derive2 { name="paws.database"; version="0.1.11"; sha256="0dglgags3bsjhlr18idszfa3421bd7z5pjb3ajca0m3qbks13sxk"; depends=[paws_common]; }; + paws_machine_learning = derive2 { name="paws.machine.learning"; version="0.1.11"; sha256="1s0gkcm95gngyn2g9jrplzyxnb1ib0z6cp95y25hr3yvim9yx2ci"; depends=[paws_common]; }; + paws_management = derive2 { name="paws.management"; version="0.1.11"; sha256="0n62bbminvcrcvll3wsqnqg41qk0alglh6ncg5jwb357qk6r59jg"; depends=[paws_common]; }; + paws_networking = derive2 { name="paws.networking"; version="0.1.11"; sha256="1kw28pcdxjjgrcliqj854a4cx3jvrvf0mlz5xdcdfdas25hjvqng"; depends=[paws_common]; }; + paws_security_identity = derive2 { name="paws.security.identity"; version="0.1.11"; sha256="1pc416pnvrljbzi61wry7s3ampsbd8g9xqf3h28ws3903qmi1cv1"; depends=[paws_common]; }; + paws_storage = derive2 { name="paws.storage"; version="0.1.11"; sha256="0zpnb0cjw1lvwq4wax9471lyh68q9zja3k15rnxdm5qad7a3915x"; depends=[paws_common]; }; pbapply = derive2 { name="pbapply"; version="1.4-3"; sha256="08gb6c8p1r9z8wrfidj2dfn6irm43k6f4448d1d6nxmy6msjirlg"; depends=[]; }; pbatR = derive2 { name="pbatR"; version="2.2-13"; sha256="01ra1ggdpxdl1xqjdh86qynr5gkgzw01ww6j9bwgx4mj20i6j1ha"; depends=[rootSolve survival]; }; pbdBASE = derive2 { name="pbdBASE"; version="0.5-3"; sha256="1f90bk1mp1s03177b9g5w5ni77jzrzc1pl3bjx0w0fjbjs1myn79"; depends=[pbdMPI pbdSLAP]; }; @@ -12469,11 +12970,11 @@ in with self; { pbdPROF = derive2 { name="pbdPROF"; version="0.4-0"; sha256="174jwrkvw5qz1430y6id01w1czlw45j1yw8a8dyw36knrmvmdz10"; depends=[]; }; pbdRPC = derive2 { name="pbdRPC"; version="0.2-1"; sha256="1pz71zfs9qw96dj3h5mrm734vbbi4drlv9hrw91dbzm3a7jsxg4q"; depends=[]; }; pbdSLAP = derive2 { name="pbdSLAP"; version="0.3-0"; sha256="1jxpgsxkzi3s1qf3g01xma9mqwgi1b22x5lh5xnr78wa0764dyd3"; depends=[pbdMPI rlecuyer]; }; - pbdZMQ = derive2 { name="pbdZMQ"; version="0.3-4"; sha256="0adiac53yq305ymhrds1gas4jm0rn1ddv7c7df5ky2cfhpb4ny87"; depends=[]; }; + pbdZMQ = derive2 { name="pbdZMQ"; version="0.3-5"; sha256="1v8iv1pzs4j3ics9k9h4xjkv6z1ma2xbqy003xk2lqax6srqi02d"; depends=[]; }; pbivnorm = derive2 { name="pbivnorm"; version="0.6.0"; sha256="05jzrjqxzbcf6z245hlk7sjxiszv9paadaaimvcx5y5qgi87vhq7"; depends=[]; }; pbixr = derive2 { name="pbixr"; version="0.1.4"; sha256="098fwmar56l8w5r58grirqypdmc2c4hil7bi11z18llja62fncnw"; depends=[dplyr formatR jsonlite stringr textclean xml2 zip]; }; - pbkrtest = derive2 { name="pbkrtest"; version="0.5-0.1"; sha256="0sgl8r74cknmp8lnq5jvc1w181274ylgk6w4pxf4mzkfii42argm"; depends=[broom dplyr knitr lme4 magrittr MASS Matrix numDeriv]; }; - pbm = derive2 { name="pbm"; version="1.1.0"; sha256="054navz4fmn25nq3lsfnsnm35shj9wq4qz69d4ajw0q09gnb1cy8"; depends=[]; }; + pbkrtest = derive2 { name="pbkrtest"; version="0.5.1"; sha256="1if7msv9i7jhg1as1f7m81a95dnwhwj3yfs24bqr0f6r0ch4b8xj"; depends=[broom dplyr knitr lme4 magrittr MASS Matrix numDeriv]; }; + pbm = derive2 { name="pbm"; version="1.2.1"; sha256="0nkqhrvlzf2imkq5pbni3c1k4vc75y26rra3czbchs111v7jrcqv"; depends=[]; }; pbmcapply = derive2 { name="pbmcapply"; version="1.5.0"; sha256="0i58gcqpnbyvc448qfgm45b7rpbmrnagsvk1h1hsqchbbicfslnz"; depends=[]; }; pbo = derive2 { name="pbo"; version="1.3.4"; sha256="0v522z36q48k4mx5gym564kgvhmf08fsadp8qs6amzbgkdx40yc4"; depends=[lattice]; }; pbs = derive2 { name="pbs"; version="1.1"; sha256="0cpgs6k5h8y2cia01zs1p4ri8r7ljg2z4x8xcbx73s680dvnxa2w"; depends=[]; }; @@ -12485,26 +12986,28 @@ in with self; { pca3d = derive2 { name="pca3d"; version="0.10.2"; sha256="0xpln78zdh6q7xff6pj2jaq2kafrijmlikmpnsfar2fzgkaw7jx6"; depends=[ellipse rgl]; }; pcaBootPlot = derive2 { name="pcaBootPlot"; version="0.2.0"; sha256="1320d969znk9xvm1ylhc3a31nynhzyjpbg1fsryq72nhf8jxijaa"; depends=[FactoMineR RColorBrewer]; }; pcaL1 = derive2 { name="pcaL1"; version="1.5.4"; sha256="1myl12537bxwmyicm8v891rflq8g6bhz9j0gcjcqgf9z80y52ayc"; depends=[]; }; - pcaPP = derive2 { name="pcaPP"; version="1.9-73"; sha256="1z2kdf9gfp965xbcd4rg6vf20d1bl443na0qjkpq7gmzpaq6cifa"; depends=[mvtnorm]; }; + pcaPP = derive2 { name="pcaPP"; version="1.9-74"; sha256="1dlrz5plb8b89vr3j6sn9jwryyhcwflqkiilxkybbr379m1pp0sh"; depends=[mvtnorm]; }; pcadapt = derive2 { name="pcadapt"; version="4.3.3"; sha256="01wvcflfsnlsq23vq03n870fxsab3ab29k26nqlqxw82lbvx99s3"; depends=[bigutilsr data_table ggplot2 magrittr mmapcharr Rcpp rmio RSpectra]; }; pcal = derive2 { name="pcal"; version="1.0.0"; sha256="07119k5f4h9jc48bicl4q5i7bdrkha3rz22r6g44c8ilnkvjhw6j"; depends=[Rdpack]; }; - pcalg = derive2 { name="pcalg"; version="2.7-0"; sha256="0n2876jbp4ivrjrv15j31f0rd83xn6g7wfnszzq3q011s0vx5hxs"; depends=[abind bdsmatrix BH clue corpcor fastICA ggm graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; + pcalg = derive2 { name="pcalg"; version="2.7-2"; sha256="0zry3a37zh1lyh4xdj85hcrf1v7gwlnmaji3v111b2qp4mzyd690"; depends=[abind bdsmatrix BH clue corpcor fastICA ggm graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; pcalls = derive2 { name="pcalls"; version="1.0"; sha256="1vdgvrzfv69p3p5zc9i6gxq53f36s0mia4idzrbsda661f1bhmxk"; depends=[]; }; pccc = derive2 { name="pccc"; version="1.0.5"; sha256="0jh8yadks76ip9jmgvld9nycdm74f5gllkyhfmnrir8vi6xwvbad"; depends=[dplyr Rcpp]; }; pcdpca = derive2 { name="pcdpca"; version="0.4"; sha256="0ys4hrin0w3f87d1d986wvrfkfwapzj9hz7d7v92r60ns74g7r5m"; depends=[fda freqdom]; }; - pcds = derive2 { name="pcds"; version="0.1.1"; sha256="1y6msc2b35gcd99yb1zv13li1ilw6c53pcw7jmly4p7sb35kqlqb"; depends=[combinat interp plot3D plotrix Rdpack]; }; + pcds = derive2 { name="pcds"; version="0.1.2"; sha256="1xzjs1pyjr0mrr9wdn30vkzp2bzc4ms7cby0pb95ysmvrdxl81d7"; depends=[combinat interp plot3D plotrix Rdpack]; }; pcensmix = derive2 { name="pcensmix"; version="1.2-1"; sha256="1yrz4hdj52in8z65qyl18kh7frv75rb8ss5ljv3vbm6yhxi32jnd"; depends=[]; }; pcev = derive2 { name="pcev"; version="2.2.2"; sha256="1l0afcdzkxzkhkc8ln2fzi50hc7nfq46lg6hhx6rrzkb41w82iqw"; depends=[corpcor RMTstat]; }; pcg = derive2 { name="pcg"; version="1.1"; sha256="194j72hcp7ywq1q3dd493pwkn1fmdg647gmhxcd1jm6xgijhvv87"; depends=[]; }; pcgen = derive2 { name="pcgen"; version="0.2.0"; sha256="1v2fmxbj9gz5sg0hizw03ad8cfm9v25708h7fvnf6gb42b2mmyb3"; depends=[ggm graph Hmisc lme4 MASS Matrix pcalg sommer]; }; - pch = derive2 { name="pch"; version="1.4"; sha256="0vfx0jirmfcy47l6xw1yvss68624605378cpqc58ygllwddcqz1y"; depends=[survival]; }; - pchc = derive2 { name="pchc"; version="0.3"; sha256="14vlj4y996nakl830sr932lrlbj32a6abk25d3snv5gfagqjjbx2"; depends=[bigmemory bigstatsr bnlearn Rfast Rfast2 robustbase]; }; - pcmabc = derive2 { name="pcmabc"; version="1.1"; sha256="1x4qvs5v134z93j1r3zg08kynqyhgd2yc3y2vk0vif8mabvx3zv4"; depends=[ape mvSLOUCH phangorn TreeSim yuima]; }; + pch = derive2 { name="pch"; version="2.0"; sha256="1nnawsc6mscwd4z62hhilpn04a9iapx551vvjm3alwk2makhj0wf"; depends=[Hmisc survival]; }; + pchc = derive2 { name="pchc"; version="0.5"; sha256="18dryvmqrs3cil1jlx4ndnsnp0v2wh2ya9y0ijgm6pfkkdrlf307"; depends=[bigmemory bigstatsr bnlearn Rfast Rfast2 robustbase]; }; + pcmabc = derive2 { name="pcmabc"; version="1.1.1"; sha256="1bacxxgcrgsa7h1baybwwinw3n95cx5wkkfm5cb4iscgk910mfmb"; depends=[ape distory geiger mvSLOUCH phangorn TreeSim yuima]; }; pcnetmeta = derive2 { name="pcnetmeta"; version="2.7"; sha256="0jibi4wylxkisgj740xbibjqs60d5xg9my4sx7vshgfl941y9wcv"; depends=[coda rjags]; }; pco = derive2 { name="pco"; version="1.0.1"; sha256="0k1m450wfmlym976g7p9g8arqrvnsxgdpcazk5kh3m3jsrvrcchf"; depends=[]; }; + pcoxtime = derive2 { name="pcoxtime"; version="1.0.1"; sha256="0c71k5vcz0fryd4cz5kg7m2sbz2rllajxmzdzahcjfrlm82nirxr"; depends=[doParallel foreach ggplot2 pec PermAlgo prodlim Rcpp RcppArmadillo riskRegression survival]; }; pcr = derive2 { name="pcr"; version="1.2.2"; sha256="1lmgm8k3s7780ivrdj0zk1ninx7b5jffir6q5p2p47h62qqjmp5d"; depends=[ggplot2]; }; pcse = derive2 { name="pcse"; version="1.9.1.1"; sha256="1rb9146vjkf36vc5v3frykmsff7kp6qp1hhmj8pak583in4rz8f8"; depends=[]; }; - pct = derive2 { name="pct"; version="0.7.0"; sha256="1q4y4zyz6z1rq43b92f1nbaq54kr15bzi29wxp3xq07w9kfvc3p4"; depends=[boot readr sf stplanr]; }; + pcsstools = derive2 { name="pcsstools"; version="0.1.1"; sha256="1vp4lflxzzgjfh1nkkfvnb74pjmbcdgrc1hlakjd8i5rw7swvr20"; depends=[gtools Rdpack]; }; + pct = derive2 { name="pct"; version="0.8.0"; sha256="1y4xjhm6bnmqzwm73xz1nilpb31s26hlkdyn123ig80lpd1inlgy"; depends=[boot readr sf stplanr]; }; pcts = derive2 { name="pcts"; version="0.15"; sha256="1wl3hgj0sn9128vwcqin37jn5ww3na4g7r1isj39j6m2v76s3ndk"; depends=[BB gbutils lagged lubridate Matrix mcompanion PolynomF Rdpack sarima xts zoo]; }; pdR = derive2 { name="pdR"; version="1.7"; sha256="05rnyb9znb71ilr9kf62x30knby1rm0p4ain220wvb62vkz054d7"; depends=[boot car coefplot lmtest papeR plm sandwich]; }; pdSpecEst = derive2 { name="pdSpecEst"; version="1.2.4"; sha256="1sf2d7vh7a1qc0cq230an8pzg9qi9g640z0ql8x2pp9wfawfzn1f"; depends=[ddalpha multitaper Rcpp RcppArmadillo Rdpack]; }; @@ -12517,47 +13020,50 @@ in with self; { pdfsearch = derive2 { name="pdfsearch"; version="0.3.0"; sha256="0mk1s8b7cdz025xn9kg5xnw388sndhjm80ckf71daxviknrzcscf"; depends=[pdftools stringi tibble tokenizers]; }; pdftables = derive2 { name="pdftables"; version="0.1"; sha256="1gnwjijr89cczchc7yi4w5xiw0dalbymvj23rymm8cfra34iwn5p"; depends=[httr]; }; pdftools = derive2 { name="pdftools"; version="2.3.1"; sha256="01i5g2mjkshis0zlm7lrvi7kkzl4dn3if1hzwkgzf9n2mi33ndsx"; depends=[qpdf Rcpp]; }; - pdi = derive2 { name="pdi"; version="0.4.1"; sha256="1az6q407x9src6j0ax9q228s764knrlv5rnllvl8s3z9q071315q"; depends=[dplyr magrittr purrr randomForest readxl stringr tibble tidyr tidyselect]; }; + pdi = derive2 { name="pdi"; version="0.4.2"; sha256="04lz16al9c3ycdswfpf1fanghglpzbl8pfggr9bjmcn7k2v91ysv"; depends=[dplyr magrittr purrr randomForest readxl stringr tibble tidyr tidyselect]; }; pdist = derive2 { name="pdist"; version="1.2"; sha256="18nd3mgad11f2zmwcp0w3sxlch4a9y6wp8dfdyzvjn7y4b4bq0dd"; depends=[]; }; pdmod = derive2 { name="pdmod"; version="1.0.1"; sha256="04bk9gjg2c55hk6k1hy0m29927s8a5ig6mr4xb89npam68g0pcms"; depends=[mco]; }; pdp = derive2 { name="pdp"; version="0.7.0"; sha256="0wcszaq4c14f9a2r1gd32mzhs035jlg2w8mkfklzigcj7fv9xmi8"; depends=[ggplot2 gridExtra lattice magrittr mgcv plyr viridis]; }; - pdqr = derive2 { name="pdqr"; version="0.2.1"; sha256="1444r51lh66kmhvkp8ivr95zlnxfgv28whl0axwb56hf5vi44lp9"; depends=[]; }; + pdqr = derive2 { name="pdqr"; version="0.3.0"; sha256="0agkxl23h57smq292l5b0wdi2ixxg6l0fi74sans5hljmyg2zqns"; depends=[]; }; pds3 = derive2 { name="pds3"; version="0.5.0"; sha256="1hipi4ygk30khrrslxq3m9qdichazhrl34k444shs7gi6wjx9ilr"; depends=[rly]; }; pdxTrees = derive2 { name="pdxTrees"; version="0.4.0"; sha256="0cw1zrkawc2wnbd2pif8732kl92qvklxvx6hnikx3siz22psvbl8"; depends=[dplyr magrittr rlang]; }; pdynmc = derive2 { name="pdynmc"; version="0.9.3"; sha256="07376gf5i98sf4k8dmd1yrw0h7nhdd39qdjbrz1916dwm45psmga"; depends=[data_table MASS Matrix optimx qlcMatrix Rdpack]; }; peRiodiCS = derive2 { name="peRiodiCS"; version="0.5.0"; sha256="1366gmn6qfciwcjsfnbl3hfa16ffn11g00fm0kv74ilvm3nnawk3"; depends=[Hmisc rms]; }; peRspective = derive2 { name="peRspective"; version="0.1.0"; sha256="1zz3znzaa80k60jddys5fhxwx4c8lyqymx5fw2zvj654rnk0mmzc"; depends=[crayon dplyr glue httr jsonlite magrittr purrr rlang rlist stringr tibble]; }; - peacesciencer = derive2 { name="peacesciencer"; version="0.1.0"; sha256="12sqpqcljhls899d7mnlma1iqbqhg815nkjxb9zwjhjljynxh1i9"; depends=[countrycode dplyr geosphere lubridate magrittr rlang stringr tibble tidyr]; }; + peacesciencer = derive2 { name="peacesciencer"; version="0.3.0"; sha256="1x4lgbrh8n3wqn5yv2d8ya7c934fqv8xyv8bk6rqh8bx5rnx6i5k"; depends=[dplyr geosphere lubridate magrittr rlang stringr tidyr]; }; peacots = derive2 { name="peacots"; version="1.3"; sha256="128qpz06b0giz80lp9yq9l6pxcjglfr97yickg7z64vzzl2jilmq"; depends=[]; }; peakPick = derive2 { name="peakPick"; version="0.11"; sha256="1zf7ff9arm4hkdxrfhb0p8p7npd51icy773g2raaqsfys825xwhm"; depends=[matrixStats]; }; peakRAM = derive2 { name="peakRAM"; version="1.0.2"; sha256="0mj7f8jqkfky61xag2km0svbgvfmif3c1d8ccav6pv1963cg3cvv"; depends=[]; }; pearson7 = derive2 { name="pearson7"; version="1.0-3"; sha256="0vdhhds1lngaff7dkx4b1az3syqw8b22w2jskcrw0m49wp1dbbha"; depends=[]; }; pec = derive2 { name="pec"; version="2020.11.17"; sha256="1g2mmnw4i5bm4r1krn7fmjbijx8fawmxmzcjh1l8qd8f79bxzh42"; depends=[foreach lava prodlim riskRegression rms survival timereg]; }; - pedSimulate = derive2 { name="pedSimulate"; version="0.0.4"; sha256="0dz92cwnkb6vwkr18rkxil6cizfib522wxs1agbhz6dx0kv9xbhn"; depends=[]; }; + pedSimulate = derive2 { name="pedSimulate"; version="0.1.2"; sha256="0awbfcbylx7gz4nf58vhidfh299z35m1xnwpl8mqkqmm4i6h1azg"; depends=[]; }; + pedbuildr = derive2 { name="pedbuildr"; version="0.2.1"; sha256="19yzfg5jms2qnww4p8npmk9815hrgqsbd49h8pi62yy9kjqnccai"; depends=[forrel glue pedprobr pedtools]; }; pedgene = derive2 { name="pedgene"; version="3.3"; sha256="0y6kr5ad4fmxljsj0czs9h1dkz63wvqiira9ibgsf0707xb0vh7f"; depends=[CompQuadForm kinship2 Matrix survey]; }; pedigree = derive2 { name="pedigree"; version="1.4"; sha256="1dqfvzcl6f15n4d4anjkd0h8vwsbxjg1lmlj33px8rpp3y8xzdgw"; depends=[HaploSim Matrix reshape]; }; pedigreeTools = derive2 { name="pedigreeTools"; version="0.1"; sha256="0kgbjyw9dlp4s91cyg5w0p2vn2h9pg9ixrhc5pwvkp3v1acd0xfm"; depends=[Matrix]; }; pedigreemm = derive2 { name="pedigreemm"; version="0.3-3"; sha256="1bpkba9nxbaxnivrjarf1p2p9dcz6smf9k2djawis1wq9dhylvsb"; depends=[lme4 Matrix]; }; pedmut = derive2 { name="pedmut"; version="0.2.0"; sha256="0851r4yl5n1mf8pk3nik5kcnv12ffxc1hl1wxp6b81qz5lbfwxaf"; depends=[]; }; pedometrics = derive2 { name="pedometrics"; version="0.7.0"; sha256="0rqldc67yrcg16i5q9wrmfmh3lw3qrfdxwdb4mxkjxx18v4fv737"; depends=[lattice latticeExtra Rcpp]; }; - pedprobr = derive2 { name="pedprobr"; version="0.4.0"; sha256="0hsz7pdj6hkr91m5x5as0dyv6gn2swf2ld3rangk55z58pngcbr0"; depends=[pedmut pedtools]; }; + pedprobr = derive2 { name="pedprobr"; version="0.5.0"; sha256="1hl2v98rfj71ggz75p8yfjhds12g88mgp9hzckk16ykdyggrrc7v"; depends=[pedmut pedtools]; }; pedquant = derive2 { name="pedquant"; version="0.1.6"; sha256="1hjiqsbdcca4pk36rapndpa3awcv2jlql0g1qk66vplnlg5d6zwl"; depends=[curl data_table ggplot2 gridExtra httr jsonlite plotly readr readxl rvest scales stringi TTR xml2 zoo]; }; - pedtools = derive2 { name="pedtools"; version="0.9.6"; sha256="0rjr2d1qml7y5sl3mppy40ncx5hzf0kazrxcflssv922vxb4h565"; depends=[kinship2]; }; - pegas = derive2 { name="pegas"; version="0.14"; sha256="0lr06gajzdanj8ax91kgpxsj863m367v2s1z5gnxps3999n0xybx"; depends=[adegenet ape]; }; - pems_utils = derive2 { name="pems.utils"; version="0.2.26.4"; sha256="13d5cg2wdz84inby017bra6xzwhkp5qcy1b213r387fq771h2xrx"; depends=[baseline dplyr ggplot2 lattice latticeExtra loa RColorBrewer Rcpp rlang]; }; + pedtools = derive2 { name="pedtools"; version="0.9.7"; sha256="10qj2n3f39sv0pr20k198fg48s5l76rv9pwd5ciravj94vrfak20"; depends=[kinship2]; }; + pegas = derive2 { name="pegas"; version="1.0"; sha256="0nbdcrpha2r50gp0nymr4lqmqhd4237rzz6ank8cqdhl7lcsz69v"; depends=[adegenet ape]; }; + pems_utils = derive2 { name="pems.utils"; version="0.2.29.1"; sha256="0nmawl1l2wf77r02qpazqwm5708fk98k7l07wyybviwb1j3x1pqj"; depends=[baseline dplyr ggplot2 lattice latticeExtra loa RColorBrewer Rcpp rlang]; }; penDvine = derive2 { name="penDvine"; version="0.2.4"; sha256="0znpvsr7zy2wgy7znha1qiajcrz1z6mypi3f5hpims33z7npa7dl"; depends=[doParallel fda foreach lattice latticeExtra Matrix quadprog TSP]; }; penMSM = derive2 { name="penMSM"; version="0.99"; sha256="1xdcxnagvjdpgnfa5914gb41v5y4lsvh63lbz1d2l8bl9mpff3lm"; depends=[Rcpp]; }; penPHcure = derive2 { name="penPHcure"; version="1.0.2"; sha256="1c90d6f78npvzsvcy9vh8s6izfgbcxzly37lpwhqgdl5daww03l1"; depends=[MASS Rcpp RcppArmadillo Rdpack survival]; }; penalized = derive2 { name="penalized"; version="0.9-51"; sha256="1zcrwa93mc27qj3g4ayc2k895r6g8q0g6qb2azmvj7wqk750va7a"; depends=[Rcpp RcppArmadillo survival]; }; penalizedLDA = derive2 { name="penalizedLDA"; version="1.1"; sha256="1bw5wiixmmg1vr3v0d59vh67f0gy2rvr30bi58skvrkb25qcjq6l"; depends=[flsa]; }; penalizedSVM = derive2 { name="penalizedSVM"; version="1.1.2"; sha256="03zw95bc6svbnzak9x72s3b8l9gh581mxn2di1fl89gxlh864amd"; depends=[corpcor e1071 lhs MASS mlegp statmod tgp]; }; + penalizedclr = derive2 { name="penalizedclr"; version="0.1.0"; sha256="0ka27azfdj4wa1p628b99pkrfjy1x8yjyd3d5g2v8mbsfg3j3bwg"; depends=[clogitL1 penalized survival tidyverse]; }; penaltyLearning = derive2 { name="penaltyLearning"; version="2020.5.13"; sha256="0297rp5zn6d0axl44i3baq2vqvhrx6s8irrysvqdcx1rkishf4j0"; depends=[data_table ggplot2]; }; - pencal = derive2 { name="pencal"; version="0.1.2"; sha256="03z3yz5n8ds6lhx8qh4mxy34hxv3csv1iwwv214lrg92dpzz9ns4"; depends=[doParallel dplyr foreach glmnet MASS nlme ptmixed survcomp survival survivalROC]; }; + pencal = derive2 { name="pencal"; version="0.4.1"; sha256="0bf4inz5hwad6g73ipm0vw3bnnapg2brx3x86m1nf8m5816r8rja"; depends=[doParallel dplyr foreach glmnet lcmm magic MASS Matrix nlme survcomp survival survivalROC]; }; pencopulaCond = derive2 { name="pencopulaCond"; version="0.2"; sha256="18hjjxnd0l2ms20ddqkghfbd4as5kq2rgwqzpz4y38k6nw76x511"; depends=[doParallel fda foreach igraph lattice latticeExtra pacotest quadprog TSP]; }; pendensity = derive2 { name="pendensity"; version="0.2.13"; sha256="1wcsib7m2161nqqrmgdvrj7lr8zq6njc9xr935hwfh3qbbgkmfjb"; depends=[fda lattice]; }; - pense = derive2 { name="pense"; version="2.0.2"; sha256="0xfpb23wzjiqzcn391y9h5f9jlzi8jfpps5y77sy689lkcazmm3r"; depends=[lifecycle Matrix Rcpp RcppArmadillo rlang]; }; + pense = derive2 { name="pense"; version="2.0.3"; sha256="02c9xdadcrph8g69vjq1z1xp4nhvm89zc79xq732fbgfgn8bzdqm"; depends=[lifecycle Matrix Rcpp RcppArmadillo rlang]; }; pensim = derive2 { name="pensim"; version="1.3.2"; sha256="12rh9n6jjnlzjsdjjw60ams7l0n05skwkbql5d0jqrmpbxrca6rp"; depends=[MASS penalized]; }; - peperr = derive2 { name="peperr"; version="1.1-7.1"; sha256="12k9crhsv3p4zrcbyr85cfwp68z3r1w2kb62g7jb7h311c7zykjx"; depends=[snowfall survival]; }; + peopleanalyticsdata = derive2 { name="peopleanalyticsdata"; version="0.2.1"; sha256="0ig65y4sl6wagzcvj8wwjw2dblb61hgbsqvp76wvxbhga1q0wnpf"; depends=[]; }; + peperr = derive2 { name="peperr"; version="1.3"; sha256="0pcz7vjl4hgp25a8zv2zcsz3s3ly1zfngkpdnvvviycvq070plv4"; depends=[snowfall survival]; }; peppm = derive2 { name="peppm"; version="0.0.1"; sha256="1lvk1rjsx39mb93s9pclriw4fmf1sx05s59qqx5m3aqb4q8ffxkg"; depends=[Rcpp]; }; pepr = derive2 { name="pepr"; version="0.4.0"; sha256="0mnigx4lpl397k526sxp7ckrnp59hfrnm9gqcq0nx6j5d7379sp9"; depends=[data_table pryr stringr yaml]; }; peptider = derive2 { name="peptider"; version="0.2.2"; sha256="109z81x6jcsx2651lclff7ak55zb1i89pyi58rxri40aamx4b1x2"; depends=[discreteRV dplyr plyr]; }; @@ -12565,21 +13071,22 @@ in with self; { perARMA = derive2 { name="perARMA"; version="1.6"; sha256="0k70lcqhiiffrwzvh51asnhx68qxpnjnxadarvgpgbc7kfy7lv9x"; depends=[corpcor gnm matlab Matrix signal]; }; perccal = derive2 { name="perccal"; version="1.0"; sha256="1akak068d0g70amj5sbvnqbywzy21l4wz11mhp71b7cp4xmr9n12"; depends=[Rcpp RcppArmadillo RcppEigen]; }; perccalc = derive2 { name="perccalc"; version="1.0.5"; sha256="14557k7khc3l5m0vlam0fvbsb6p78v9gfcnx5ksxcvrab28xj7p3"; depends=[multcomp tibble]; }; - perfectphyloR = derive2 { name="perfectphyloR"; version="0.2.0"; sha256="00gvmn66lb9hfli7yc3l5913xpngib1vksg5zjnxqxiwdibjfqx8"; depends=[ape phytools Rcpp RcppArmadillo]; }; - performance = derive2 { name="performance"; version="0.6.1"; sha256="0wz2zc98r99pg6r4l09qxxzv1fwxwp1md6wmhay401568kd8h5zn"; depends=[bayestestR insight]; }; + percentiles = derive2 { name="percentiles"; version="0.2.2"; sha256="08gzl2qq0856nj20bdxl3r0a7p5f4cjmvxkaqkjvq4n275ghvskq"; depends=[assertive_types assertthat dplyr R6]; }; + perfectphyloR = derive2 { name="perfectphyloR"; version="0.2.1"; sha256="1i1h5k2aqaqygd8gzq2bmz266mjzdi2mfikkz6hzmhi2il8708w9"; depends=[ape phytools Rcpp RcppArmadillo]; }; + performance = derive2 { name="performance"; version="0.7.1"; sha256="1kf8z7lrjv1bg8mqb7sq4651k2xg3d02azq7gr0jc4c52cr2yaqm"; depends=[bayestestR insight]; }; performanceEstimation = derive2 { name="performanceEstimation"; version="1.1.0"; sha256="08jx2zl6xh0rp54xa70gb717wbfdzfrx9b47i3b3ly41qaf85vrc"; depends=[dplyr ggplot2 parallelMap tidyr]; }; pergola = derive2 { name="pergola"; version="1.0"; sha256="1650ipp2b455xdkznwm7bnxvimad7nbyr9i1lg2vdh64j1qfh7gl"; depends=[seriation]; }; - periscope = derive2 { name="periscope"; version="0.5.2"; sha256="0w8yjmvmfp9pakcbc3cjjgszy13py50fadpzslrjfwzmdx7d5vvl"; depends=[DT ggplot2 lubridate shiny shinyBS shinydashboard shinydashboardPlus writexl]; }; + periscope = derive2 { name="periscope"; version="0.6.3"; sha256="0iq0pklipli54bdgl8wl0mnm7a6ik90j0gwqks237phly23njwal"; depends=[DT ggplot2 lubridate shiny shinyBS shinydashboard writexl]; }; perm = derive2 { name="perm"; version="1.0-0.0"; sha256="0075awl66ynv10vypg63fcxk33qzvxddrp8mi4w08ysvimcyxijk"; depends=[]; }; - permGPU = derive2 { name="permGPU"; version="0.14.9"; sha256="10r2qxbvzjxv3520lrn6cwi5akhhwgkhz7yaqxi5vh2f5l0s49wy"; depends=[Biobase foreach RUnit survival]; }; + permGPU = derive2 { name="permGPU"; version="0.15"; sha256="1bxydc5dw7ka45k6ban35d5xb1dw9yq9480qns8b39cc0x3acmhc"; depends=[Biobase foreach RUnit survival]; }; permGS = derive2 { name="permGS"; version="0.2.5"; sha256="0d2kp3c1fmnjjmsvc2qwh6m66yqvy2vrrxgv1fj2i4clsbavfa0y"; depends=[coin survival]; }; - permPATH = derive2 { name="permPATH"; version="1.1"; sha256="06h1lqpmkg4ajjh4r837qp094h105n4mpvafnp2nsbv9yyayd4h8"; depends=[R2HTML xtable]; }; - permimp = derive2 { name="permimp"; version="1.0-0"; sha256="0nkl5xga2w79mb7p2zyvznhkmjai1k5zsf1kpfjz1p44xd8ypn13"; depends=[ipred party randomForest survival]; }; + permPATH = derive2 { name="permPATH"; version="1.2"; sha256="074knhcn88nzisfl20ais71micnnjqbm5lqp6jfkqj176r2af7cq"; depends=[R2HTML xtable]; }; + permimp = derive2 { name="permimp"; version="1.0-1"; sha256="0sz7m1h29k3ay6nkkqddb9ac4mhpmd6ad3nn7n3nb863j0f53mv4"; depends=[ipred party randomForest survival]; }; permubiome = derive2 { name="permubiome"; version="1.3.1"; sha256="0a4swfkmqqr8a1psc6rlnxnpm43fj42gjkikcqy8d84wrfz2wrr9"; depends=[dabestr ggplot2 gridExtra Matrix rlang]; }; permuco = derive2 { name="permuco"; version="1.1.0"; sha256="1mp3yp4p1b382c31a3jcmq1n90zvb1lggacb3zdblpmz1yrj4v1c"; depends=[Matrix permute]; }; permutations = derive2 { name="permutations"; version="1.0-9"; sha256="1701jah8i9frw3cbqlri2l56lansw54l3pp9h1fy36a8ahhcllkg"; depends=[magic numbers partitions]; }; permute = derive2 { name="permute"; version="0.9-5"; sha256="0ra8p5mf2590azrkas8z2ry7mif77xqxd29n4zgyi5vll225726j"; depends=[]; }; - permutes = derive2 { name="permutes"; version="1.0"; sha256="1lrhlqwv1y2vgklgwp16jw90vmgifnp4rlxw55hhj8gs97agv5y8"; depends=[ggplot2 lmPerm plyr viridis]; }; + permutes = derive2 { name="permutes"; version="2.0.1"; sha256="0pdw92vxda61rpwhhybr5ngayp2yl7v286rayw0xf42c3gs9dmf9"; depends=[plyr]; }; perry = derive2 { name="perry"; version="0.2.0"; sha256="1lfmcq2xsxmfs7cxvhgxcsggslgjicbaks4wcjw1yjh67n559j46"; depends=[ggplot2 robustbase]; }; persiandictionary = derive2 { name="persiandictionary"; version="1.0"; sha256="0rgi36ngpiax3p5zk4cdgf3463vgx7zg5wxscs2j7834yh37jwax"; depends=[]; }; personalized = derive2 { name="personalized"; version="0.2.5"; sha256="073mi3g0khba1s8wz01h1xc0zxq0yr05nflf15nss2rv7lh2qazb"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; @@ -12589,21 +13096,21 @@ in with self; { personr = derive2 { name="personr"; version="1.0.0"; sha256="12iyzdc2kksy74npzdgy19lnhm9l9c7f4lkwshmsp6by09kb2dm3"; depends=[ggplot2 rlang rmarkdown shiny whisker]; }; perspectev = derive2 { name="perspectev"; version="1.1"; sha256="175s1nq5z4gfs5qb39lq230g6n0v8fxzs5hr9j2rgx0knpbjfq03"; depends=[ape boot doParallel foreach ggplot2 mapproj sp]; }; perturbR = derive2 { name="perturbR"; version="0.1.3"; sha256="1sdk5ls8x66lds4cy40xbl383px4xmrh21cw4bgy83rzbjjzwp2h"; depends=[ggplot2 igraph]; }; - peruse = derive2 { name="peruse"; version="0.1.0"; sha256="04bg6pcljqcm4y8yv9yans99rl02ij2ffk7zk5gpfykcwdzrdrmc"; depends=[magrittr purrr R6 rlang]; }; + peruse = derive2 { name="peruse"; version="0.3.1"; sha256="10j942fr5jpygl4z8vn2ww2kjiplga5s45c448bclnq1qx3as36k"; depends=[magrittr rlang]; }; pesel = derive2 { name="pesel"; version="0.7.3"; sha256="125rgbar1aiw7x3ywfb09s3gh3k0zal0p44h4928d854mn4m986s"; depends=[]; }; + pestr = derive2 { name="pestr"; version="0.8.2"; sha256="15w89cipky9di4csbp0cbw7s3qslr5mk94wivps77i3k0j9ys74g"; depends=[curl DBI dplyr httr jsonlite magrittr readr rlang RSQLite tidyr]; }; petitr = derive2 { name="petitr"; version="1.0"; sha256="0i13zhdrdka0ij0khdzj6ylvvcn4wxvplb8a368i1s64cpgak30c"; depends=[]; }; petrinetR = derive2 { name="petrinetR"; version="0.2.1"; sha256="0h9nsjsj87b6qvvkg81kn0j2c4xkzq89sddp9l6pjh636bdqwf8i"; depends=[DiagrammeR dplyr purrr visNetwork xml2]; }; - petro_One = derive2 { name="petro.One"; version="0.2.3"; sha256="1xky85vfk2mpj8xxdqggismzirm3rx2wr51g12zr80i1dx5wak4i"; depends=[cluster data_table dplyr ggplot2 graph magrittr RColorBrewer Rgraphviz rvest RWeka SnowballC tibble tm urltools wordcloud xml2]; }; - pewdata = derive2 { name="pewdata"; version="0.3.1"; sha256="1dn6v41kwrs8dj66063y7l6vryih2q49qcfvmhaiaxzvbpzymiyc"; depends=[foreign magrittr purrr rio RSelenium stringr]; }; + pewdata = derive2 { name="pewdata"; version="0.3.2"; sha256="1a4ci8hzpmwxs48lsppswcwkxv72yn44w486m9izwvx8wr1nlh2d"; depends=[foreign magrittr purrr rio RSelenium stringr]; }; pexm = derive2 { name="pexm"; version="1.0.0"; sha256="1043pqn4irpmjv2ywqfpmp45lmx6ad2rr15cnr5sizxg9bjl1vjv"; depends=[coda msm rjags]; }; pez = derive2 { name="pez"; version="1.2-2"; sha256="1c9gicg1g85x29y5kh2fkp0c2r923wc00hdw1b9rzfv0hgscbcxb"; depends=[ade4 animation ape caper FD Matrix mvtnorm phytools picante quantreg vegan]; }; pfa = derive2 { name="pfa"; version="1.1"; sha256="0ikdd7ps8wnjp9nm66w447m06hqxnnk553jglxikl2w5d9vk6b31"; depends=[lars POET quantreg]; }; pfica = derive2 { name="pfica"; version="0.1.1"; sha256="04gq5zwsqf33gv73k4mh74cn149jqzk1qq922zv2bpd2dva1xdn2"; depends=[corpcor fda moments]; }; - pflamelet = derive2 { name="pflamelet"; version="0.1.1"; sha256="0yprydhz30r2ysp7i4n3g3vriln3094c7yablnfwb8dkiz3032fl"; depends=[abind pbapply plotly TDA viridis]; }; + pgTools = derive2 { name="pgTools"; version="0.1.0"; sha256="0bjms06r9ssww3j4129c3khgnsj13dnb4xv2r9zcw66i94jkqn6v"; depends=[data_table DBI]; }; pgam = derive2 { name="pgam"; version="0.4.15"; sha256="12llflsb32dfvxl3nbyb9bsl9bmd35g5g163hd3axzmg1bgi21ls"; depends=[]; }; pgdraw = derive2 { name="pgdraw"; version="1.1"; sha256="1s1b1izpgryrqsjkdh3yvr137054sipj3kwdkzlx2af8xjr53f85"; depends=[Rcpp]; }; pgee_mixed = derive2 { name="pgee.mixed"; version="0.1.0"; sha256="115vvpv54q80486i3xs2yhmfyx476cf4g1v43q6l7wj3jwzcrvbg"; depends=[copula mvtnorm Rcpp RcppArmadillo]; }; - pgirmess = derive2 { name="pgirmess"; version="1.6.9"; sha256="1i1qn68isaz2lbpqyydjgj9kri09aknza5qjn6m1wa1alyl7f611"; depends=[boot maptools rgdal rgeos sp spdep splancs]; }; + pgirmess = derive2 { name="pgirmess"; version="1.7.0"; sha256="1kh5vca2bnaa5yzazbhmhyw097x1v7b61cr6zxk3lxn9w6vqdhiy"; depends=[boot maptools rgdal rgeos sp spdep splancs]; }; pglm = derive2 { name="pglm"; version="0.2-2"; sha256="0n0wkc5fn9g3jgx070l23dv7ir2k8kz1302q0dawx4pzr4wdwrq0"; depends=[Formula maxLik plm statmod]; }; pgmm = derive2 { name="pgmm"; version="1.2.4"; sha256="1bpknwfzw6rmag5s7ajg1glx46wkby5ahyya76ksa7r8vz4ffs3z"; depends=[]; }; pgnorm = derive2 { name="pgnorm"; version="2.0"; sha256="1k9z7pvmranr8m62v7amc0pj6lwzh3wqi79gg3mflifn1mr6c057"; depends=[]; }; @@ -12612,12 +13119,13 @@ in with self; { ph2bayes = derive2 { name="ph2bayes"; version="0.0.2"; sha256="1xm7930gycxrz308dnfnp023yidqik52sbrli35f3773mnfcid2g"; depends=[Rcpp]; }; ph2bye = derive2 { name="ph2bye"; version="0.1.4"; sha256="0h5d8d4bagkp6g0nb67cb225ki5p1amnclnfj6afgdcsli5clr67"; depends=[animation nleqslv Rcpp VGAM]; }; ph2mult = derive2 { name="ph2mult"; version="0.1.1"; sha256="0w3w18fkr9xzv6mpb00cz5id33zgsnl6s8zgjpchzvrhmpjpp437"; depends=[clinfun]; }; - phangorn = derive2 { name="phangorn"; version="2.5.5"; sha256="0ihkaykqjmf80d8wrk3saphxvnv58zma6pd13633bd3cwanc33f5"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; }; - pharmaRTF = derive2 { name="pharmaRTF"; version="0.1.1"; sha256="0xc9ns0kg2cxm1hq23a6ai7hlj5x1ymiijawp82szh2n275n1yxf"; depends=[assertthat huxtable purrr stringr]; }; + ph2rand = derive2 { name="ph2rand"; version="0.1.0"; sha256="0k6azygcvzkirjx3vpx6kbhax1yai8r467kmmnvhh3p0v46mc5zp"; depends=[dplyr ggplot2 Rcpp scales tibble tidyr]; }; + phangorn = derive2 { name="phangorn"; version="2.7.0"; sha256="19113x95vq09168x6v4ryfcdrb3a4ckp8rimd43sdkmz9pkfdxkx"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; }; + pharmaRTF = derive2 { name="pharmaRTF"; version="0.1.2"; sha256="0zaik245vcykg2jp04lfa9lk9qqkk2mvpzdvk4v402s5rg6xkd7l"; depends=[assertthat huxtable purrr stringr]; }; phase1PRMD = derive2 { name="phase1PRMD"; version="1.0.2"; sha256="0gr73nsp0an0ci6l86h9fw6l791jdw0b1497qi58w25zypggdyac"; depends=[arrayhelpers coda dplyr ggplot2 gridExtra kableExtra knitr MASS plyr RColorBrewer reshape2 rjags]; }; phase1RMD = derive2 { name="phase1RMD"; version="1.0.9"; sha256="0dnyqa6jias2jqjqjpiq32jnd21ghb2shw45vdq8b5xyb8rxclwj"; depends=[arrayhelpers boot coda ggplot2 mvtnorm rjags]; }; phaseR = derive2 { name="phaseR"; version="2.1.3"; sha256="1xqh6k8zl0jc2srklb8vg57f88kssm80b286asg2cawanj06qs2k"; depends=[deSolve]; }; - phateR = derive2 { name="phateR"; version="1.0.4"; sha256="0r2i2h2yg41g5ly9gvfyxsld3g0fwww78wffclx3ibal0v31xf45"; depends=[ggplot2 Matrix memoise reticulate]; }; + phateR = derive2 { name="phateR"; version="1.0.7"; sha256="16xb6fy0aa024054jwfbavjbzhwj6g4p6yrzy1lnzvpn8kb23hn5"; depends=[ggplot2 Matrix memoise reticulate]; }; phd = derive2 { name="phd"; version="0.1"; sha256="1scwan3pkhdl0nyhpjrkcal1f58x0jkdkhixdcxppr1363r1v22a"; depends=[glmnet]; }; pheatmap = derive2 { name="pheatmap"; version="1.0.12"; sha256="1hdh74az3vyzz6dqa311rhxdm74n46lyr03p862kn80p0kp9d7ap"; depends=[gtable RColorBrewer scales]; }; phenModel = derive2 { name="phenModel"; version="1.0"; sha256="07jsc8jiwgxvhv4m6nr7llm22zzh5hd3pakw5c93jzim2835zvkp"; depends=[dplyr ggplot2 reshape]; }; @@ -12635,14 +13143,14 @@ in with self; { phiDelta = derive2 { name="phiDelta"; version="1.0.1"; sha256="0g1g5516p8i1gfpvsy75rdirib8sx1ki2mbf1cvgsnzh70h72gbv"; depends=[]; }; phia = derive2 { name="phia"; version="0.2-1"; sha256="0rv2akl5a488vax4sd9wnx765mch4vvcmg3iyxyljzl5kpqh5r00"; depends=[car Matrix]; }; philentropy = derive2 { name="philentropy"; version="0.4.0"; sha256="09vi6mfcig397226kq2fgymwg5ng8iysi6b2f616masscgshplxz"; depends=[dplyr KernSmooth Rcpp]; }; - phillydaodata = derive2 { name="phillydaodata"; version="1.0.0"; sha256="000qc9222ww083v2gkrvhr52y2gg9c0f1zslbagy7nya64yrckvj"; depends=[data_table janitor]; }; + phillydaodata = derive2 { name="phillydaodata"; version="1.0.1"; sha256="1pw1c77x507shwv3j1h0bqj354rrm08rl6xpj1jgqnfih6f5kif8"; depends=[data_table janitor]; }; phm = derive2 { name="phm"; version="0.1.2"; sha256="0jm4w2rj80jz24134y8sj6w7f2icdizs644zfbiq77vzfj1mg8i6"; depends=[data_table shiny slam tm]; }; phonR = derive2 { name="phonR"; version="1.0-7"; sha256="0al2cbynnbvmd90lk1w1g1ppslqq0ng8vbb6bl7m4kqwd2lgv056"; depends=[deldir plotrix splancs]; }; phonTools = derive2 { name="phonTools"; version="0.2-2.1"; sha256="01i481mhswsys3gpasw9gn6nxkfmi7bz46g5c84m13pg0cv8hxc7"; depends=[]; }; - phonenumber = derive2 { name="phonenumber"; version="0.2.2"; sha256="1m5idp538lvynmfp8m7l89js6hk5lpp26k419bdvj3hd3ap0n9lg"; depends=[]; }; - phonfieldwork = derive2 { name="phonfieldwork"; version="0.0.10"; sha256="11hxmshcmwjrvncqj1i37iqsddqah1q23jqzcvq4dqb97vw4z5p3"; depends=[phonTools rmarkdown tuneR uchardet xml2]; }; + phonenumber = derive2 { name="phonenumber"; version="0.2.3"; sha256="1gwh7cg1zyy197sj16wcxqyz2rx5z83cd4rwmf22ycpgvz2dwzw9"; depends=[]; }; + phonfieldwork = derive2 { name="phonfieldwork"; version="0.0.11"; sha256="0a5qnl1r8g0h1nsp22awp6hy0lkdi6adc729grpz8mbniz4vdlkc"; depends=[phonTools rmarkdown tuneR uchardet xml2]; }; phonics = derive2 { name="phonics"; version="1.3.9"; sha256="1625jysaf1r06bicz5zyzq6lawr8b0yylaj9v314b0mcgkvn8i12"; depends=[BH data_table Rcpp]; }; - photobiology = derive2 { name="photobiology"; version="0.10.5"; sha256="0nh1bqzwlajmdgd1ckhai5ky3zhlgvhp4l1hzlkihl5w480qpl4p"; depends=[dplyr lubridate plyr polynom rlang splus2R stringr tibble tidyr zoo]; }; + photobiology = derive2 { name="photobiology"; version="0.10.6"; sha256="12j880bmhslnsl67ad8f7df0fzyqlc5pxdsqywy5807rxkl7ir4g"; depends=[dplyr lubridate plyr polynom rlang splus2R stringr tibble tidyr zoo]; }; photobiologyFilters = derive2 { name="photobiologyFilters"; version="0.5.2"; sha256="0n987klwyj06xikmvg9cvsjzrxll1d7p358jw4ls0j46byki98s5"; depends=[photobiology]; }; photobiologyInOut = derive2 { name="photobiologyInOut"; version="0.4.22-1"; sha256="1dqjlcra3vqydxjf6rwha6y1bykkpqwf8bqjkljs4kb89642qbv1"; depends=[colorSpec dplyr lazyeval lubridate photobiology readr readxl stringr tibble tidyr]; }; photobiologyLEDs = derive2 { name="photobiologyLEDs"; version="0.4.3-1"; sha256="0inhl6ba1fzkak4752m60hkm6fzapzyz5kchvz18yv33dmm13v1c"; depends=[photobiology]; }; @@ -12654,7 +13162,7 @@ in with self; { photosynthesis = derive2 { name="photosynthesis"; version="2.0.0"; sha256="1q6wcl2fl7mwf27v5yljk8alrz4jvbhybxxrqgi1c41qbs6581yz"; depends=[checkmate crayon dplyr furrr future ggplot2 glue gunit magrittr minpack_lm nlme pkgnet purrr rlang stringr tealeaves tidyselect units]; }; phreeqc = derive2 { name="phreeqc"; version="3.6.3"; sha256="0z20gj1kqhnbvx33sswz5ivj7nk2p4hia4gr2npscs94nc50b5j4"; depends=[]; }; phuassess = derive2 { name="phuassess"; version="1.1"; sha256="0jplj9gih32dllx2hw5aqvc9b94sbrbv66s3a5r8mdbpjh93rhng"; depends=[]; }; - phyclust = derive2 { name="phyclust"; version="0.1-29"; sha256="0jy2ylz6znsn5fsxrlv7fasmbfw3drbvvf68vd1cf5hz50p7i543"; depends=[ape]; }; + phyclust = derive2 { name="phyclust"; version="0.1-30"; sha256="0fy9q95vmlm9idpax7alhpfwn30gflnc9md72g91jypyxkx5nr7p"; depends=[ape]; }; phyext2 = derive2 { name="phyext2"; version="0.0.4"; sha256="0j871kgqm9fll0vdgh071z77ib51y8pxxm0ssjszljvvpx1mb8rb"; depends=[ape phylobase]; }; phylin = derive2 { name="phylin"; version="2.0.2"; sha256="0v6fyk2prja448vdi7ipwzws28fjfi188pfncjf9mhn8jrgpfxl6"; depends=[]; }; phyloTop = derive2 { name="phyloTop"; version="2.1.1"; sha256="1n44kr3a9yg8yvy3m493zi04x6aiqm424fp2ls9yzyx1cga2h9nk"; depends=[ape igraph NHPoisson phylobase]; }; @@ -12667,7 +13175,7 @@ in with self; { phylolm = derive2 { name="phylolm"; version="2.6.2"; sha256="04pz7i44s8w6py4nk2zilzjlkrf1c5dbb6jij7zfkk49hvslbynn"; depends=[ape future_apply]; }; phylometrics = derive2 { name="phylometrics"; version="0.0.1"; sha256="1pmr6l3wmaf91wdlsc5m63l07fibngnly2qzkma0rdi463ii03il"; depends=[mvtnorm]; }; phylopath = derive2 { name="phylopath"; version="1.1.2"; sha256="15fs845ay7nbhaxwapc2b33f134nqj1m365l44iyikdm4cacmdx0"; depends=[ape ggm ggplot2 ggraph igraph MuMIn pbapply phylolm purrr tibble]; }; - phyloregion = derive2 { name="phyloregion"; version="1.0.4"; sha256="1l28hnnxymq1hskdhhjkhd5hiaf8j9ip82nsz5gm7rgrdhzw54yg"; depends=[ape betapart colorspace igraph Matrix phangorn raster rgdal rgeos sp vegan]; }; + phyloregion = derive2 { name="phyloregion"; version="1.0.6"; sha256="161pjy66vhpjwc4h9q4jiqpyzn0v4nawx8ahspjpc7a376rk5552"; depends=[ape betapart clustMixType colorspace dismo igraph Matrix phangorn randomForest raster rgdal rgeos sp vegan]; }; phyloseqGraphTest = derive2 { name="phyloseqGraphTest"; version="0.1.0"; sha256="0y1hxj68dcic4i7ihnw9hgf28qp6s6kpq4c08dy7gv19gq7sllgd"; depends=[ggnetwork ggplot2 igraph intergraph phyloseq]; }; phylosignal = derive2 { name="phylosignal"; version="1.3"; sha256="1h73wwczwak5v89mybq16lmmfr0fxfv5mx347ffipy6q9vgvwqx5"; depends=[adephylo ape boot DBI igraph phylobase Rcpp RcppArmadillo]; }; phylotate = derive2 { name="phylotate"; version="1.3"; sha256="092kvn32j06vm8ilwjkgidcz11r3qhsmi0cb0g0nnykw0a0vii4p"; depends=[]; }; @@ -12681,10 +13189,10 @@ in with self; { picante = derive2 { name="picante"; version="1.8.2"; sha256="19savjzj44b7ifdxcp02ynj22z4n4ikq2aipc74ljzy3yykmqmjn"; depends=[ape nlme vegan]; }; picasso = derive2 { name="picasso"; version="1.3.1"; sha256="1z7zm88wjp7fia7054l7i55f152iddrjj9wbcpcskhc8s6kfg53c"; depends=[MASS Matrix]; }; pid = derive2 { name="pid"; version="0.50"; sha256="05s3xqf95d4avh7gkr49jsm8jzacbv694c3wgppkkc40zip6vkc7"; depends=[DoE_base FrF2 FrF2_catlg128 ggplot2 png]; }; - piecepackr = derive2 { name="piecepackr"; version="1.6.3"; sha256="1h0f3n85ayk44dqldcw6in39vl1gcldvv3w3nks7jn8cmr16h9b8"; depends=[backports gridGeometry grImport2 jpeg png purrr R6 stringr tibble]; }; + piecepackr = derive2 { name="piecepackr"; version="1.7.2"; sha256="1bwbazgn6hi3rlbfxmvywdqd3h4p5sfa539mnl812l7mb3diflkv"; depends=[backports gridGeometry grImport2 jpeg png purrr R6 stringr tibble]; }; piecewiseSEM = derive2 { name="piecewiseSEM"; version="2.1.2"; sha256="1qxwc1drx26p4cgymrfjmg5i7ypl7gddv40virkpmc0qaag9pq36"; depends=[car DiagrammeR emmeans igraph lme4 MASS multcomp nlme]; }; piggyback = derive2 { name="piggyback"; version="0.0.11"; sha256="17cmkzp4g5gcapab3g5jxpabsmw4s3zsizqd99bh36xyw76v1jds"; depends=[clisymbols crayon fs gh git2r httr jsonlite lubridate magrittr memoise usethis]; }; - pillar = derive2 { name="pillar"; version="1.4.7"; sha256="167ji21fx04s2niw5pjq9vzxgagxzsg3gimh8dzr2kl5ljrb5vfd"; depends=[cli crayon ellipsis fansi lifecycle rlang utf8 vctrs]; }; + pillar = derive2 { name="pillar"; version="1.6.0"; sha256="1pfa6q63ji6mqsvkbpjvvlaivw66nyinwbk82jh0a0c6dy41w47i"; depends=[cli crayon ellipsis fansi lifecycle rlang utf8 vctrs]; }; pim = derive2 { name="pim"; version="2.0.2"; sha256="0kwlm6n23ccs0jz4plsqprg6inj3qv74zhvg9gpxyj3ksvdxp58i"; depends=[BB nleqslv]; }; pimeta = derive2 { name="pimeta"; version="1.1.3"; sha256="1mx0m438db4n041bns6sm8sr8vrj6w8b2kvpmrkkp0bly2vpv40q"; depends=[ggplot2 Rcpp RcppEigen scales]; }; pinbasic = derive2 { name="pinbasic"; version="1.2.2"; sha256="0mcw68wrixz2jf62nfifdgg8bnp4h1p3byivz28wi61blj8iaa75"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; }; @@ -12695,37 +13203,43 @@ in with self; { pinnacle_data = derive2 { name="pinnacle.data"; version="0.1.4"; sha256="1sl36i2857b3xwx7iwgy8mkgjvz7nfa74ch1n8kcxbj59ib7mp8p"; depends=[tibble]; }; pinochet = derive2 { name="pinochet"; version="0.1.0"; sha256="0qy18mlw34cv9p7b3qb5bidxyq44k0hzj91hm5vp6wkjhik4knvi"; depends=[]; }; pinp = derive2 { name="pinp"; version="0.0.10"; sha256="1qah1b9chn237pfxisjsn6rr4h9h9zdqrk323c0k1qds7vm0xpra"; depends=[knitr rmarkdown]; }; - pins = derive2 { name="pins"; version="0.4.4"; sha256="19fd7i88f8wg6c8bn3n4s8jfjgbnpbraw0qxqks5ssg9xc8m0cdz"; depends=[backports base64enc crayon digest filelock fs httr jsonlite magrittr mime openssl rappdirs withr yaml zip]; }; + pins = derive2 { name="pins"; version="0.4.5"; sha256="03nknb5rxbsv6fyq4qjynda0kfr4w6a1g6z7vzypq1dsyvhyr63s"; depends=[backports base64enc crayon digest filelock fs httr jsonlite magrittr mime openssl rappdirs withr yaml zip]; }; pinyin = derive2 { name="pinyin"; version="1.1.6"; sha256="0rw9qd5hbcmpi30vdqs31ijy37d8jlpqv0xif2nndb8cwj8x5bw2"; depends=[data_table splitstackshape]; }; pipe_design = derive2 { name="pipe.design"; version="0.5.1"; sha256="0r0szkdzifxmnnbr6675w8ij4zwqgxj3gwahc7a74mxr51f7qh8j"; depends=[ggplot2 gtools xtable]; }; pipeGS = derive2 { name="pipeGS"; version="0.4"; sha256="0ki4i70r5f195b4jfv3hxlxz3zj57mhy2yf4984bwr11impilz5w"; depends=[]; }; pipeR = derive2 { name="pipeR"; version="0.6.1.3"; sha256="16lj227x24pviqb4dcrj7a55l31p5mm0cbwsb6m3y3n6k5wcd2nh"; depends=[]; }; pipefittr = derive2 { name="pipefittr"; version="0.1.2"; sha256="0pzd7f0rhn0rydncki666zlajdwyiay3apa17cb0xy5454d99mvh"; depends=[magrittr miniUI rstudioapi shiny stringr]; }; pipeliner = derive2 { name="pipeliner"; version="0.1.1"; sha256="1cyyd1bin89dh0zrhic3i541bj8nnaphg6jq2jqkhnxn2nvax11g"; depends=[]; }; + pipenostics = derive2 { name="pipenostics"; version="0.1.7"; sha256="0c0qnh8kjgnmsg8arj7jhpdyjcdm58j9lzwi0yvl7ygk4k2klgv3"; depends=[checkmate]; }; pirate = derive2 { name="pirate"; version="1.0.0"; sha256="160mmyqdwbc4g7n7q9i4xcqp6h9bcpcz7vavsgdcpvs2mjfhfpjx"; depends=[ggplot2 MASS plyr Rcpp RcppArmadillo]; }; piratings = derive2 { name="piratings"; version="0.1.9"; sha256="0krrcf2bwicdf9fn657vkcjg5zliwi82hw3xmaqi46mdix8896gh"; depends=[ggplot2]; }; pisaRT = derive2 { name="pisaRT"; version="2.0.1"; sha256="0g4z4ixg7bsig1rjhsymncmzpl135r6mr3pqlb60gmz11851bw9w"; depends=[]; }; pitchRx = derive2 { name="pitchRx"; version="1.8.2"; sha256="0lg0xab40r8wzrww986l5q9jkg1m83g4bhsbh0kr7f2rv90av662"; depends=[ggplot2 hexbin MASS mgcv plyr XML2R]; }; piton = derive2 { name="piton"; version="1.0.0"; sha256="1krf6zi238m275nxjlpyayv8y2drbgs2kg19dpkqm0lmlz5y5ar8"; depends=[Rcpp]; }; - pivmet = derive2 { name="pivmet"; version="0.3.0"; sha256="04awr5sj3x79hwzqd4hv43gfy7w6lpl2hbbny72vvjwc6g0z574p"; depends=[bayesmix bayesplot cluster corpcor MASS mclust mvtnorm RcmdrMisc rjags rstan runjags]; }; - pivotaltrackR = derive2 { name="pivotaltrackR"; version="0.1.0"; sha256="024srncm288mn3bz6hv7ljzkchmnljk4yc2d4z7i05vsn7dzd2c6"; depends=[curl httr]; }; - pivottabler = derive2 { name="pivottabler"; version="1.5.0"; sha256="0b3zh7qwvwvy0d2svnvpdbqwc8w2mb1s9g3acf883dhy3cnxq4ly"; depends=[data_table dplyr htmltools htmlwidgets R6]; }; + pivmet = derive2 { name="pivmet"; version="0.4.0"; sha256="1svy6va5za7svinh77vhhhd05n8rr1s1ayjqcgxhssd8j98ckmxd"; depends=[bayesmix bayesplot cluster corpcor MASS mclust mvtnorm rjags rstan runjags]; }; + pivotaltrackR = derive2 { name="pivotaltrackR"; version="0.2.0"; sha256="141aaanb00qc3z4mdws42zhg7j6bcd2i1gp6nf6h6h7ikkmr0v0y"; depends=[curl httr]; }; + pivottabler = derive2 { name="pivottabler"; version="1.5.1"; sha256="0jczgm1fkm4rrxh3zjzixjl3hsxwf8wmhf7d7ch4vy6s3l5g9hy2"; depends=[data_table dplyr htmltools htmlwidgets R6]; }; + pixarfilms = derive2 { name="pixarfilms"; version="0.2.0"; sha256="1543rzr0r4cwq9l5y09h8w22w0mba17qy9k6byirg8raagp8lmxj"; depends=[tibble]; }; + pixelpuzzle = derive2 { name="pixelpuzzle"; version="1.0.0"; sha256="1bgy9anhgmjfy97816g2ns5pg5vsm7dwdn5l01m2zma6qnq01knm"; depends=[beepr cli stringr]; }; pixels = derive2 { name="pixels"; version="0.1.1"; sha256="1vvahrajm8ys5vgfc0iyzj2a6vzvgaakkj6i0m2sy40l2w44dn0q"; depends=[htmlwidgets miniUI shiny]; }; - pixiedust = derive2 { name="pixiedust"; version="0.9.0"; sha256="01qcd8rsph3i65p9w4asqb1x6a671vbihzsby19ravp22lqzfmxg"; depends=[broom checkmate htmltools knitr labelVector magrittr reshape2 scales]; }; - pixmap = derive2 { name="pixmap"; version="0.4-11"; sha256="04klxp6jndw1bp6z40v20fbmdmdpfca2g0czmmmgbkark9s1183g"; depends=[]; }; + pixiedust = derive2 { name="pixiedust"; version="0.9.1"; sha256="1jy3xr4wpfs8j3giyia1kwrb5nlmqjbjwvj9qpax6izmcdk4srz2"; depends=[broom checkmate htmltools knitr labelVector magrittr reshape2 scales]; }; + pixmap = derive2 { name="pixmap"; version="0.4-12"; sha256="1v1a1adsgh5jlvvi98j4nhb1h681s97ip76zdrga12rlsjaahfw9"; depends=[]; }; pkdata = derive2 { name="pkdata"; version="0.1.0"; sha256="1kmcalidw2zidd6i8ds0k057b3187by2k8z6764va43d5garbbcv"; depends=[lubridate]; }; - pkgKitten = derive2 { name="pkgKitten"; version="0.2.0"; sha256="1pp7143d1kxv9rn544xavlsjx334kb0b315s0y18vrnf6mzn7vlp"; depends=[]; }; + pkgKitten = derive2 { name="pkgKitten"; version="0.2.1"; sha256="06ax0snxmpvlc9ps8sixzxp9bg6zwgv93gqgsac3g9m8zncm6a66"; depends=[]; }; pkgbuild = derive2 { name="pkgbuild"; version="1.2.0"; sha256="0qx920h2viwjg10va81nj0xja495d8ni6vcc25ggvzki6a6k069f"; depends=[callr cli crayon desc prettyunits R6 rprojroot withr]; }; - pkgcache = derive2 { name="pkgcache"; version="1.1.1"; sha256="11hvd43bg78alpb5ipvwh9s8qzvvqr0ss7x24zq10i7754mfs9iy"; depends=[assertthat callr cli curl digest filelock glue prettyunits processx R6 rappdirs rlang tibble uuid]; }; - pkgcond = derive2 { name="pkgcond"; version="0.1.0"; sha256="0pxj798042g23cf19r67nbgdyhpd868n2pkqjvjgrgr8ivwnkf1h"; depends=[]; }; + pkgcache = derive2 { name="pkgcache"; version="1.2.1"; sha256="1rb75n5gjvvn8jyynvkcjnxci14czjhrja9n2b7qkpx61h1w90cd"; depends=[assertthat callr cli curl digest filelock glue jsonlite prettyunits processx R6 rappdirs rlang tibble uuid]; }; + pkgcond = derive2 { name="pkgcond"; version="0.1.1"; sha256="03a4blq3niw1mljzylamvmr3l43czqlww4i6n7zb0dlym9x8gs1w"; depends=[assertthat]; }; pkgconfig = derive2 { name="pkgconfig"; version="2.0.3"; sha256="0l1qph8zyi2sic3k2qcd7vlfl7rzfh1q7z7zvjkl5f7y1x2fy3rk"; depends=[]; }; + pkgdepends = derive2 { name="pkgdepends"; version="0.1.0"; sha256="12l82a7n271fk31k0q04ljcrybh0pmr55c8dfvnnammky325bf4f"; depends=[callr cli crayon curl desc filelock glue jsonlite lpSolve pkgbuild pkgcache prettyunits processx ps R6 rematch2 rprojroot tibble withr zip]; }; pkgdown = derive2 { name="pkgdown"; version="1.6.1"; sha256="1k31biyvxkv3xjc1yy3nzb9wfza3vbx97fv17nly5a6vlv7zqbs4"; depends=[callr crayon desc digest downlit fs httr magrittr memoise openssl purrr ragg rematch2 rlang rmarkdown tibble whisker withr xml2 yaml]; }; - pkgfilecache = derive2 { name="pkgfilecache"; version="0.1.2"; sha256="07x63w19fg7sl547501r2dx2ds5sfdfb29xvqrvjibf8265x25fw"; depends=[downloader rappdirs]; }; + pkgfilecache = derive2 { name="pkgfilecache"; version="0.1.3"; sha256="1xashx86ks0sb5hj7hyf71zml2a5gj13avhkyg9n63mjhsw792k1"; depends=[downloader rappdirs]; }; pkggraph = derive2 { name="pkggraph"; version="0.2.3"; sha256="1isiywgm20rypc5qr03p0k7lis76zzd96x5ncbvia644d2n13brm"; depends=[curl data_table dplyr ggnetwork ggplot2 htmltools igraph intergraph Matrix network networkD3 plyr RColorBrewer tibble]; }; - pkgload = derive2 { name="pkgload"; version="1.1.0"; sha256="03bv8xq4s6s7m34y1kjs99jzlb95vwrfi76mbnhmzcx2pc6ld78q"; depends=[cli crayon desc pkgbuild rlang rprojroot rstudioapi withr]; }; + pkglite = derive2 { name="pkglite"; version="0.1.1"; sha256="1kfy9bn8hf31m4h95mglqbxya3hk3n6s4y1hlz9n43sqiy5dyz4k"; depends=[cli magrittr remotes]; }; + pkgload = derive2 { name="pkgload"; version="1.2.1"; sha256="0ghpkv0p0xz4gpm49sywhvahhzwdakfb5kqm6yz8s1fr5gdpy9z6"; depends=[cli crayon desc rlang rprojroot rstudioapi withr]; }; pkgmaker = derive2 { name="pkgmaker"; version="0.32.2"; sha256="14ggsd24n5g5rvn0wl4w90ipxzmywqikh28llj89q6kpxwnv4iff"; depends=[assertthat codetools digest registry stringr withr xtable]; }; - pkgndep = derive2 { name="pkgndep"; version="1.0.1"; sha256="18j8yrbzk80yamqqcyhbl6y7dla684hvqffv6l83d5fvhzadscz6"; depends=[callr ComplexHeatmap crayon GetoptLong]; }; + pkgndep = derive2 { name="pkgndep"; version="1.0.3"; sha256="15kxzgq1v73rzccj9hng3zj775x27w04j31dcn2bhnnqzi8xviy5"; depends=[callr ComplexHeatmap crayon GetoptLong]; }; pkgnet = derive2 { name="pkgnet"; version="0.4.1"; sha256="194ynbhq6k7gp8l4ccq6m37qhhf791ynbppjh77cc0q50w2jz387"; depends=[assertthat covr data_table DT futile_logger glue igraph knitr magrittr R6 rlang rmarkdown visNetwork]; }; + pkgnews = derive2 { name="pkgnews"; version="0.0.2"; sha256="0kqyy1fchpcyclxh6gly23pkfcf5b3hpsq1bhj4ykzbl4bc002h2"; depends=[]; }; pkgsearch = derive2 { name="pkgsearch"; version="3.0.3"; sha256="1icn8qw6jpcgbmidqpml4ifpv1i5z2i4hp6b0gpb1xk9dlf6mnl2"; depends=[assertthat curl jsonlite parsedate prettyunits tibble]; }; pkgverse = derive2 { name="pkgverse"; version="0.0.1"; sha256="0lsv7s9vsjvfpy19nxbdlbm363j01wwqqnrp0nlrik590hfq4w83"; depends=[devtools usethis]; }; pkmon = derive2 { name="pkmon"; version="1.0"; sha256="0j2v4zlf7vgy5gld29xiii15m9i85cpiwc25rmzjm02cz2p32c72"; depends=[]; }; @@ -12735,35 +13249,37 @@ in with self; { plRasch = derive2 { name="plRasch"; version="1.0"; sha256="1rnpvxw6pzl5f6zp4xl2wfndgvqz5l3kiv9sh4cpvhga0gl8zjaw"; depends=[survival]; }; plac = derive2 { name="plac"; version="0.1.1"; sha256="08kqnjzbfygnbqvqg5wyw148kfhjqxy46y4vaiq9zzwzj58w8vzn"; depends=[Rcpp RcppEigen survival]; }; placer = derive2 { name="placer"; version="0.1.3"; sha256="0d7b6mkyyrcjn1pqxlj9mjis6vzks986i7vhc8ffkp8hz8sc7271"; depends=[]; }; + places = derive2 { name="places"; version="0.1.1"; sha256="08w6z5gbsskcbi5j1rml9mi9qdab6w2q58vz80h6xc6bh6mr0fab"; depends=[data_table dplyr geosphere googleway hms rgdal rlang sp stringr tidyr]; }; plainview = derive2 { name="plainview"; version="0.1.1"; sha256="095y0cjp7g0h1kdbiwh1k2mj0ap8vm54nx8mf84ckamzc1jnmlfk"; depends=[gdalUtils htmltools htmlwidgets lattice png raster viridisLite]; }; plan = derive2 { name="plan"; version="0.4-3"; sha256="0j3mvcy97r7adcs7q6z0w9ng74jcfwii1xp8kcl2cwbzs2fd425r"; depends=[]; }; planar = derive2 { name="planar"; version="1.6"; sha256="0x5xdb2afpc1w8s217hy765mz938kg5b5j7vzqzhlsh2dzdjccpj"; depends=[cubature dielectric ggplot2 plyr Rcpp RcppArmadillo reshape2 statmod]; }; planets = derive2 { name="planets"; version="0.1.0"; sha256="01zh7lgaykr9p186yy0vksn2pmc69b3xxh78w7z6wclvqjb7zh1p"; depends=[]; }; - plantecophys = derive2 { name="plantecophys"; version="1.4-4"; sha256="005js9r7xg4jf2aqgsqddkkxhcdnhsiyzc1cqa7j59r4g5xbmh1j"; depends=[]; }; + plantecophys = derive2 { name="plantecophys"; version="1.4-6"; sha256="1qf9a38n8nvvz8dvqra9mdsmkbkhxymjrin0wfis8g1ndf1f406c"; depends=[]; }; plantecowrap = derive2 { name="plantecowrap"; version="1.0.4"; sha256="0syxf63xy5whzw03ys5cxyw7689mr7ihgmqddv53jb8rlbwm84p8"; depends=[ggplot2 minpack_lm plantecophys tidyr]; }; plaqr = derive2 { name="plaqr"; version="2.0"; sha256="15pdb57123m3cahvcsyrrvxjwxvs2f389yxip91gjxn68jf6cx1l"; depends=[quantreg]; }; - plater = derive2 { name="plater"; version="1.0.2"; sha256="0z3s33xpfkd1ln37bpsgycbb35hgjq23yi151imdxyv80493vy4w"; depends=[dplyr]; }; + plater = derive2 { name="plater"; version="1.0.3"; sha256="1sjf1wkpgz5pa5z149bj40haa4srvf4a66rh3ij25bvgasslshfq"; depends=[dplyr rlang]; }; platetools = derive2 { name="platetools"; version="0.1.3"; sha256="1c0bxgfa31sgb6mg8nnqx6pp18262walar1lxcg2dpjhzqlgzn0c"; depends=[ggplot2 RColorBrewer]; }; + platowork = derive2 { name="platowork"; version="0.0.1"; sha256="09ps20lqli50nhhd3368fwf8cjsbshn428fbbbckbxnynxk5cwsy"; depends=[]; }; plde = derive2 { name="plde"; version="0.1.2"; sha256="1g1b1sgyfxgfkjcr3sdkan8jd6r7yyi0izc83vyj11bdk08jx22h"; depends=[]; }; - pleiades = derive2 { name="pleiades"; version="0.3.0"; sha256="17lg0yr5mfz5wky7lia1gkq15805p3zsy444cf477spz2rb06zgc"; depends=[crul DBI dbplyr dplyr gistr jsonlite rappdirs RSQLite]; }; + pleLMA = derive2 { name="pleLMA"; version="0.1.0"; sha256="0fr0n4lja5bzzlkhh2j7d4j1mnnh37cz9ixq7mzhpm92dn7a0mj7"; depends=[mnlogit]; }; pleio = derive2 { name="pleio"; version="1.6"; sha256="0av1sl0fdn2ia7ddalbvidhcnsvs36iq618s1bknjw29y5yyq020"; depends=[Matrix rms]; }; - plethem = derive2 { name="plethem"; version="1.1.0"; sha256="03pa7vsiah5sic0gzb61ipc3166qfjrx0yjzwd448l1qvm2vl1qa"; depends=[data_table deSolve devEMF devtools DiagrammeR DiagrammeRsvg doParallel dplyr DT foreach formatR gdata ggplot2 httk magrittr miniUI NonCompart officer plotly pracma readxl reshape2 rhandsontable RSQLite rstudioapi rsvg shiny shinyalert shinyBS shinybusy shinydashboard shinyFiles shinyjs shinythemes shinyWidgets sqldf stringr tidyr truncdist V8]; }; + pleiotest = derive2 { name="pleiotest"; version="1.0.0"; sha256="05mgz42wn1y7q8ffgvak22r3k40q9rv1qvpal8yycp83p7hdzg7v"; depends=[RColorBrewer Rcpp RcppArmadillo]; }; plfMA = derive2 { name="plfMA"; version="1.0.5"; sha256="13hs06n4b28vlik9bzqdx6j85q05bsd6hb10cr39581a3m33rv5m"; depends=[cairoDevice gWidgets2 gWidgets2RGtk2 limma RGtk2]; }; plfm = derive2 { name="plfm"; version="2.2.2"; sha256="1jgf3jrkdpsf77i4lf68s6sxax95c9is4nryhnzanq9i5f23j24v"; depends=[abind sfsmisc]; }; plgp = derive2 { name="plgp"; version="1.1-7"; sha256="02g6saabrsd8pra0szbwcbilf6w5ywg2gxqb5zdvbxds2vw36hn0"; depends=[mvtnorm tgp]; }; plink = derive2 { name="plink"; version="1.5-1"; sha256="0rn2i9i8af9aq0xgxhpcdchs2952lq2d2sg8x3js0zi3vcml76k0"; depends=[lattice MASS statmod]; }; plinkFile = derive2 { name="plinkFile"; version="0.1.0"; sha256="0803hp822v9rqh4h437q2nmab19yamc4dbyi6iimm67ykp0d5xss"; depends=[]; }; - plinkQC = derive2 { name="plinkQC"; version="0.3.2"; sha256="1dmx2r5d77nhma5xdy4i7jj2hjqhaz0hxj5ym70v0ac907vpy9zb"; depends=[cowplot data_table dplyr ggforce ggplot2 ggrepel igraph optparse R_utils sys UpSetR]; }; - plm = derive2 { name="plm"; version="2.2-5"; sha256="00s4jhida9chzbnl6fdbaw29w7xyc7hnm5wkqm0hlrhdjkqp2g8m"; depends=[bdsmatrix Formula lattice lmtest MASS maxLik nlme Rdpack sandwich zoo]; }; + plinkQC = derive2 { name="plinkQC"; version="0.3.3"; sha256="0qqqq1j0j8zg6zx11p862cav58kfp93nbhmn0zfxn37k22x55lnq"; depends=[cowplot data_table dplyr ggforce ggplot2 ggrepel igraph optparse R_utils sys UpSetR]; }; + plm = derive2 { name="plm"; version="2.4-1"; sha256="0dan5g4hnyz0qlklgg4fcppjazwiz7h3kzvgvjkp1cmljii5j336"; depends=[bdsmatrix Formula lattice lmtest MASS maxLik nlme Rdpack sandwich zoo]; }; plmm = derive2 { name="plmm"; version="0.1-1"; sha256="1dfxd1mqqjy2mf7qc6mh4wx5ya9q8fkqgrf01apisb66xxx5zya7"; depends=[Formula nlme sm]; }; pln = derive2 { name="pln"; version="0.2-2"; sha256="03jjmfr1dwz6p652y917g9rv2alyam9ws6xh9ig02d3w78b0rsv9"; depends=[]; }; plogr = derive2 { name="plogr"; version="0.2.0"; sha256="0a8dhzlna79ggyhfr0nncgh15a9n6r0dsz664pz0ah323wpblqqf"; depends=[]; }; - plot_matrix = derive2 { name="plot.matrix"; version="1.5.2"; sha256="02srx9a3xyfdm66305s9nafpzcah2ixaiw8hzw86bw2jd5d4rzrl"; depends=[]; }; + plot_matrix = derive2 { name="plot.matrix"; version="1.6"; sha256="1wx9c46333kz3cgdvczb0ywp8h29p7dmxbim3dv54jv0g5hr6m4n"; depends=[]; }; plot3D = derive2 { name="plot3D"; version="1.3"; sha256="1jfzndnlci9a975qbcv66jiy2l46hs3f2049654x4jp3i4kyrr5r"; depends=[misc3d]; }; plot3Drgl = derive2 { name="plot3Drgl"; version="1.0.1"; sha256="12p4qc9vmhr86ssx6xnz3cmx84q5jgd28bw9dp4wjrn04n6l4va6"; depends=[plot3D rgl]; }; - plot3logit = derive2 { name="plot3logit"; version="3.0.0"; sha256="1g8q32lff1cghjsfkcv8rmahilwy9amrlyn7xwzq5lcxpmzkvmq9"; depends=[dplyr ellipse forcats generics ggplot2 ggtern lifecycle magrittr purrr Rdpack stringr Ternary tibble tidyr tidyselect]; }; + plot3logit = derive2 { name="plot3logit"; version="3.1.0"; sha256="0iwhaly6lzpfaanyy1qayl6faihw5rkcnh21czdr1g0f9rjimyrb"; depends=[dplyr ellipse forcats generics ggplot2 ggtern lifecycle magrittr purrr Rdpack stringr Ternary tibble tidyr tidyselect]; }; plotGMM = derive2 { name="plotGMM"; version="0.2.2"; sha256="1cgjajw3dprdlq9ri0gllbxcy33x311mbp9xdds8fgq6cs42ggyb"; depends=[amerika ggplot2 wesanderson]; }; - plotKML = derive2 { name="plotKML"; version="0.6-1"; sha256="1k5bfajgzcj912ja8s3ashsvfqz0sx10746x4ggyknyp17qrlbzw"; depends=[aqp classInt colorRamps colorspace dismo gstat pixmap plotrix plyr raster RColorBrewer rgdal RSAGA scales sp spacetime stringr XML zoo]; }; + plotKML = derive2 { name="plotKML"; version="0.8-1"; sha256="0a6hrhcsw4zm1y8ksvhf3h9pz0gm0k2fn5r7gsmnxix9p5iv7rkx"; depends=[aqp classInt colorRamps colorspace dismo gstat landmap pixmap plotrix plyr raster RColorBrewer rgdal RSAGA scales sf sp spacetime stars stringr XML zoo]; }; plotMCMC = derive2 { name="plotMCMC"; version="2.0.1"; sha256="0vxw6kbs1xvzi3sklxac9q1j4cbr8alr9c8fwifwyvpzpdk48ihf"; depends=[coda gplots lattice]; }; plotMElm = derive2 { name="plotMElm"; version="0.1.5"; sha256="0wwqzrpkmq9gzazdzlk62qig6vz43niada6fxh1wcsjqjwkcccgp"; depends=[ggplot2 interactionTest]; }; plotROC = derive2 { name="plotROC"; version="2.2.1"; sha256="0bk8j2lp80zcz4kkig1y5a1ig8vbjh7b4inzc46bn07ns1rdjgzg"; depends=[ggplot2 gridSVG plyr rlang shiny]; }; @@ -12772,32 +13288,33 @@ in with self; { plotfunctions = derive2 { name="plotfunctions"; version="1.4"; sha256="0asmxw8283fpvl83h478j5nyg59xqifqaa8f2f6l199gvvswhhg2"; depends=[]; }; plothelper = derive2 { name="plothelper"; version="0.1.9"; sha256="1ibznjqs4gpbq1vx79gg0fkm842xfqgpmmgqji2m6s712j3bdn5k"; depends=[farver ggfittext ggplot2 gridExtra magick plyr scales]; }; plotluck = derive2 { name="plotluck"; version="1.1.1"; sha256="16wqj4xfa8b7kal6v8mp2zlhwf9l3y6y5n44qbpvy652gzb2rw2z"; depends=[ggplot2 hexbin Hmisc plyr quantreg RColorBrewer scales]; }; - plotly = derive2 { name="plotly"; version="4.9.2.2"; sha256="09zl4i8q917x4hwgyjcxpwmj11dc6zlq3dz0268lzl33jvjw94lw"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 hexbin htmltools htmlwidgets httr jsonlite lazyeval magrittr promises purrr RColorBrewer rlang scales tibble tidyr viridisLite]; }; + plotly = derive2 { name="plotly"; version="4.9.3"; sha256="0801i2q7sw62x734d58h9p2fwpi1hirqj73gsg18pqkdv4b1lkfl"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 htmltools htmlwidgets httr jsonlite lazyeval magrittr promises purrr RColorBrewer rlang scales tibble tidyr vctrs viridisLite]; }; plotlyGeoAssets = derive2 { name="plotlyGeoAssets"; version="0.0.2"; sha256="1c6i4dz5qmym1pcddgffcqgb76jz84252xldprg2caylrqvzv6b7"; depends=[]; }; plotmm = derive2 { name="plotmm"; version="0.1.0"; sha256="01mi9znl471myq1yhfr8kdxpy0l67wgb3fid8gf2rzj5ph72b8hp"; depends=[amerika dplyr ggplot2 patchwork wesanderson]; }; plotmo = derive2 { name="plotmo"; version="3.6.0"; sha256="1qs1q98cfaqy59dp4hhwnvwlkc4kzd03qp7aprl2hm7r8b2gqnn0"; depends=[Formula plotrix TeachingDemos]; }; plotpc = derive2 { name="plotpc"; version="1.0.4"; sha256="1sf7n7mfyaijldm24bc8r8pfm8pp9cyaja7am14z2wpj2j9f9vyq"; depends=[]; }; plotprotein = derive2 { name="plotprotein"; version="1.0"; sha256="14kfb4xxpfp8klz31kb7cpc39636ax2cx2483vqqkciccb28f0ks"; depends=[ade4 plotrix plyr seqinr XML]; }; - plotrix = derive2 { name="plotrix"; version="3.7-8"; sha256="104llmr6dvlcnfpmd8zbdlv63k79djc4qqgadjavj4v4cmz1zkcc"; depends=[]; }; + plotrix = derive2 { name="plotrix"; version="3.8-1"; sha256="0pxfaalwwmnpv19nff0cg6b871m6gjhhmx63fpxm7730z75qh663"; depends=[]; }; plotrr = derive2 { name="plotrr"; version="1.0.0"; sha256="07ilqpa3ypqb2gpnq23r9v4kkfxz06mcak9si9adr9sf6c7gqwxz"; depends=[dplyr ggplot2]; }; plotscale = derive2 { name="plotscale"; version="0.1.6"; sha256="0h2g0rv1lh70nqmqydgg5swwnwmy08wbjajxyb1c2a716rad765j"; depends=[]; }; plotwidgets = derive2 { name="plotwidgets"; version="0.4"; sha256="1w7c9grw4pyyra230196yq32snr4wdg6xi8vh4dx5df2v500wz22"; depends=[]; }; - plpoisson = derive2 { name="plpoisson"; version="0.1.1"; sha256="0cixwd14p61x6v9v99m55l5n1hdzmrjjib2sr8kdcclbjy3fcvl7"; depends=[]; }; + plpoisson = derive2 { name="plpoisson"; version="0.2.0"; sha256="0x0vcmr7y2rp5lz4r97vjp8cn1l297hcimwf691a2l60m8s856hz"; depends=[]; }; pls = derive2 { name="pls"; version="2.7-3"; sha256="0b3ls12w19wc4xkhnsgmb333y9lyzwq3syjc3k8zs1agnw59c7cg"; depends=[]; }; - plsRbeta = derive2 { name="plsRbeta"; version="0.2.5"; sha256="1p6vj9sw3hm6nax3vahmr6z58bgc8wl787949dszckn03pxhgvpb"; depends=[betareg boot Formula MASS mvtnorm plsRglm]; }; - plsRcox = derive2 { name="plsRcox"; version="1.7.4"; sha256="1cpbhz85c8zpxcwi7ads981dynf83r5ka2zqy6i2swbi83jb5p4x"; depends=[kernlab lars mixOmics pls plsRglm risksetROC rms survAUC survcomp survival]; }; - plsRglm = derive2 { name="plsRglm"; version="1.2.5"; sha256="004x934c34rgggwb25pcfm3vlj6gc1nfnigjxnxycxjqlx8g567b"; depends=[bipartite boot car MASS mvtnorm]; }; + plsRbeta = derive2 { name="plsRbeta"; version="0.2.6"; sha256="12i1krzvza8wjbafc8rx68hqmrj215mip39xg7sn6nifxi93pi1y"; depends=[betareg boot Formula MASS mvtnorm plsRglm]; }; + plsRcox = derive2 { name="plsRcox"; version="1.7.6"; sha256="0dg4vpy15z4x61qyqc9nvqa1788g6phlrzjrk1xhns5x2h8cicma"; depends=[kernlab lars mixOmics pls plsRglm risksetROC rms survAUC survcomp survival]; }; + plsRglm = derive2 { name="plsRglm"; version="1.3.0"; sha256="1szx8kjqg47hw1b03n6rs8rydn1698s64j45q8bly7kpfxqmxvsr"; depends=[bipartite boot car MASS mvtnorm]; }; plsVarSel = derive2 { name="plsVarSel"; version="0.9.6"; sha256="0z8igm7ldz2z2vc2fmlqv2pry5lb4mckrcw9rky7cakr3q0gciqw"; depends=[bdsmatrix genalg MASS MSQC mvtnorm pls praznik progress]; }; plsdepot = derive2 { name="plsdepot"; version="0.1.17"; sha256="1i00wxr451xpfy6dnvcm11aqf9106jsh5hj7gpds22ysgm4iq5w4"; depends=[]; }; - plsdof = derive2 { name="plsdof"; version="0.2-9"; sha256="1g41nbycgzjwrackbdf08q1phqpyy6zihm5ak2728683vd88fxzv"; depends=[MASS]; }; + plsdof = derive2 { name="plsdof"; version="0.3-0"; sha256="1axi8bailiq9mjs0dvasy895b7c62114hdsaygxwz4zymfa6a3ny"; depends=[MASS]; }; plsgenomics = derive2 { name="plsgenomics"; version="1.5-2"; sha256="1pvb50nv6jc99bm2hsxpzazg26y49yi24wwwim5xcjj6j1szbip4"; depends=[boot fields MASS plyr reshape2 RhpcBLASctl]; }; plsmod = derive2 { name="plsmod"; version="0.1.1"; sha256="0jkwmr6lgy2kdxpypzks6fcqxgrgzji5navmbip2qrgnk2c0vfjk"; depends=[dplyr generics magrittr mixOmics parsnip purrr rlang tibble tidyr]; }; plsmselect = derive2 { name="plsmselect"; version="0.2.0"; sha256="044mwdqv5vw0apmx3yhn6xkdmw6baalvb8c6hhmawcs279kwi1m9"; depends=[dplyr glmnet mgcv survival]; }; plsr = derive2 { name="plsr"; version="0.0.1"; sha256="0l413m49zjpb35v0zw8dlxn53nh7fghinbmwfmldl3jgdvay2s7x"; depends=[boot ggplot2 reshape2 shiny]; }; pltesim = derive2 { name="pltesim"; version="1.0"; sha256="0mvqp8di2gwhd9wc9kvnnpxd3hkr9b9lj6g5qlkqcbrgkq6fjahs"; depends=[coreSim ggplot2]; }; - plu = derive2 { name="plu"; version="0.1.1"; sha256="1ri3665kvflpfnjnx8zicjyw1aliy4kdfv97xj5g041j3bii88lh"; depends=[]; }; + plu = derive2 { name="plu"; version="0.2.1"; sha256="12m2mb5h5xniy870akmbzgjp6019pnjjzrdkifmlri8vhbyilvh9"; depends=[backports lifecycle]; }; plugdensity = derive2 { name="plugdensity"; version="0.8-3"; sha256="1jdmq4kbs8yzgkf9f5dc7c8c52ia68fgavw7nsnc2hnz5ylw1qy9"; depends=[]; }; - plumber = derive2 { name="plumber"; version="1.0.0"; sha256="07hz7qm74p6703qm4xqr239ndbv9xyms13h1rsag2d853kki0r8h"; depends=[crayon httpuv jsonlite lifecycle magrittr mime promises R6 sodium stringi swagger webutils]; }; + plumber = derive2 { name="plumber"; version="1.1.0"; sha256="0rwr3vx0y2n70bz4aqd9iag9s0ksz4vlvsw16qz84wfcky1b79pi"; depends=[crayon ellipsis httpuv jsonlite lifecycle magrittr mime promises R6 rlang sodium stringi swagger webutils]; }; + plumberDeploy = derive2 { name="plumberDeploy"; version="0.2.1"; sha256="0icl35wck94scjyqw6di2sl6fq7zlvd8hm13fw79iqr0wyrich0r"; depends=[analogsea jsonlite lifecycle ssh]; }; plumbr = derive2 { name="plumbr"; version="0.6.9"; sha256="1avbclblqfy57pd72ximvj3zq92q1w8vszvyf6fw75j5rfwdaibk"; depends=[objectSignals]; }; pluralize = derive2 { name="pluralize"; version="0.2.0"; sha256="1s3jp41j8c03qb5zisj6m12ky7cz3n71d6p5apz0r0yn35inrhah"; depends=[V8]; }; plus = derive2 { name="plus"; version="1.0"; sha256="1l7lvnq7vahj8m7knmr4q3wj00ar7iq89j45a2dqn2bh0qyj68ls"; depends=[]; }; @@ -12805,20 +13322,21 @@ in with self; { plusser = derive2 { name="plusser"; version="0.4-0"; sha256="1g100dh8cvn9q09j0jbkw4xmwjdp1lm4651369975fm99nrlp1j9"; depends=[lubridate plyr RCurl RJSONIO]; }; plyr = derive2 { name="plyr"; version="1.8.6"; sha256="11sjjdn146w95s1vsfmmgdls082cbnm1slv98xvyjhsl2mpx4mga"; depends=[Rcpp]; }; pm4py = derive2 { name="pm4py"; version="1.2.7"; sha256="11xbsmsc9pxd98fy28l3nxzhb6c2pwvh1gmm34jnqn0rjbpb2n9i"; depends=[bupaR petrinetR purrr reticulate stringr]; }; - pmc = derive2 { name="pmc"; version="1.0.3"; sha256="06bsab09i9ydgsjx5i50kdb22ldp4g1v83a01kz3mswybi4lv9w2"; depends=[dplyr geiger ggplot2 ouch tidyr]; }; + pmc = derive2 { name="pmc"; version="1.0.4"; sha256="0y2h6r8dx721n0wwbc3i5j50j694kxanc4vxwr07939145bvpfac"; depends=[dplyr geiger ggplot2 ouch tidyr]; }; pmcgd = derive2 { name="pmcgd"; version="1.1"; sha256="1pybzvyjmzpcnxrjsas06diy3x83i1r5491s6ccyr63l56hs55d5"; depends=[mixture mnormt]; }; - pmd = derive2 { name="pmd"; version="0.1.9"; sha256="1bwanvxlh4jayr86rs3kpif9m7zqj09w11h7j0pl2mgzxglb4fms"; depends=[enviGCMS igraph RColorBrewer]; }; + pmclust = derive2 { name="pmclust"; version="0.2-1"; sha256="0wldf0bj406qxmlc7hsbamiak7qcwf8ixng9dfkswh511m3p05jd"; depends=[MASS pbdMPI]; }; + pmd = derive2 { name="pmd"; version="0.2.1"; sha256="14xra1d6qx6gxnpiwfsxz200qhmm7s4zy2j8h5kwbvbpnykdyr5c"; depends=[data_table enviGCMS igraph RColorBrewer]; }; pmdplyr = derive2 { name="pmdplyr"; version="0.3.3"; sha256="1grnqqydi84hnig1522lv4xbh9ds32wnq7sha7jn1q4186wlz1qa"; depends=[dplyr lubridate magrittr pillar rlang tibble tidyr tidyselect vctrs]; }; - pmetar = derive2 { name="pmetar"; version="0.2.7.0"; sha256="1madn5bw4cxsjrz2v39jyp3vj5y7fyi5i6rzgxwp6fg4ydfn233n"; depends=[dplyr lubridate magrittr RCurl stringr tidyr]; }; + pmetar = derive2 { name="pmetar"; version="0.3.1"; sha256="1545gm88p2ym1zj8i4m50f6n8z7g3mx2jqk27kpj81m86kkdbnym"; depends=[dplyr httr lubridate magrittr RCurl stringr tidyr]; }; pmhtutorial = derive2 { name="pmhtutorial"; version="1.5"; sha256="1hcw8hwpsivbhz86lnzy08q9n8vahnq8f7rmi4xkmg6b44582cqx"; depends=[mvtnorm Quandl]; }; pmlbr = derive2 { name="pmlbr"; version="0.2.0"; sha256="1f0i52ws8ywkz4c0s3ax3qa3qinqhv1k9qlghkama3b027zkl9zn"; depends=[FNN]; }; - pmml = derive2 { name="pmml"; version="2.3.1"; sha256="1qsrpbmwgmq9s45f30657cpfzkrvva8h1hqq1g3fd69p5g735rwp"; depends=[stringr XML]; }; + pmml = derive2 { name="pmml"; version="2.4.0"; sha256="1mfjpvj2gdkkr3ji0l9x65vsx2y8313ak26cj1dim8c9j26snamw"; depends=[stringr XML]; }; pmmlTransformations = derive2 { name="pmmlTransformations"; version="1.3.3"; sha256="0315kb5x04pidpzr04yaxyynp0mz4ilzp7vkspq4agjkds5hyc88"; depends=[]; }; pmpp = derive2 { name="pmpp"; version="0.1.1"; sha256="1srmkih6zsyf8yf1f045xy1afcz0if6nf1ncslgrq6rgm7330lkw"; depends=[data_table dplyr ggplot2 magrittr MASS Matrix minqa moments plm pracma]; }; pmr = derive2 { name="pmr"; version="1.2.5"; sha256="0dq97dfjmgxlhr3a2n20vyyzfmamcicw878hdxpw31lw02xs6yls"; depends=[]; }; pmsampsize = derive2 { name="pmsampsize"; version="1.0.3"; sha256="0i6yqxdrjlwdaghh9lzivqrszy6zfs06kjdfn88yyizy5d7z2k4s"; depends=[]; }; pmultinom = derive2 { name="pmultinom"; version="1.0.0"; sha256="0p2amb3y4jl24r21fii1qpmdbn5pfgywrx8k7x1jxpg49rk7k0rp"; depends=[fftw]; }; - pmwg = derive2 { name="pmwg"; version="0.1.9"; sha256="0ilv7spwd4l44aa66yc346swns9aprmxxx9p3zpgr6kdn8p0ncaz"; depends=[coda condMVNorm MASS MCMCpack mvtnorm]; }; + pmwg = derive2 { name="pmwg"; version="0.2.0"; sha256="1f1r66ml24ys7nx5558c189a4gcaqkr16y87dmi4ravick9l5yfi"; depends=[checkmate coda condMVNorm MASS MCMCpack mvtnorm]; }; pmxTools = derive2 { name="pmxTools"; version="1.2.1"; sha256="0r5y09ab6k31d7fbd5pn8lzaafq1ix2lrjci1bsvg0wwcxmdipw6"; depends=[chron data_tree DiagrammeR dplyr ggplot2 ggrepel gridExtra magrittr MASS stringr xml2]; }; png = derive2 { name="png"; version="0.1-7"; sha256="0g2mcp55lvvpx4kd3mn225mpbxqcq73wy5qx8b4lyf04iybgysg2"; depends=[]; }; pnmtrem = derive2 { name="pnmtrem"; version="1.3"; sha256="0053gg368sdpcw2qzydpq0c5v2cxdlwgf5k68cbw0yx41csjgvz0"; depends=[MASS]; }; @@ -12827,42 +13345,41 @@ in with self; { pocketapi = derive2 { name="pocketapi"; version="0.1"; sha256="0n4fyx4ldm14zy3pz7gygwhahi3p25misvxlmy8l9kqqr51fg26a"; depends=[dplyr glue httr jsonlite magrittr purrr tibble usethis]; }; pocrm = derive2 { name="pocrm"; version="0.12"; sha256="0ilh19vqy3lqnb4j6jw61az39swmca8za3ig3k1cjc9gwdyn1f8r"; depends=[dfcrm nnet]; }; podr = derive2 { name="podr"; version="0.0.5"; sha256="135nq0dw1x6ngf6mxy3yds3xsxhaf5rnv1cmhavlrklhdfygc0a4"; depends=[assertthat DBI dplyr lubridate magrittr odbc plogr RPostgres rstudioapi shiny stringr tibble]; }; + poems = derive2 { name="poems"; version="1.0.1"; sha256="15987nz7gx94lrkyizg0jdzkjnib5hykla7xrkg5fi0i6cch40bl"; depends=[abc doParallel foreach gdistance geosphere lhs metRology R6 raster trend]; }; pogit = derive2 { name="pogit"; version="1.2.0"; sha256="1kap1cpfp0k2vm7w4kjfja37n9z3j7ppiwvsdxl6bgpkf7kcnkp2"; depends=[ggplot2 logistf plyr]; }; poibin = derive2 { name="poibin"; version="1.5"; sha256="1sxryvwwz6ldsnkzdy56p8c895s5yvpcai9ndyjv1x5q3l05wf9v"; depends=[]; }; poilog = derive2 { name="poilog"; version="0.4"; sha256="0bg03rd5rn4rbdpiv87i8lamhs5m7n7cj8qf48wpnirg6jpdxggs"; depends=[]; }; pointRes = derive2 { name="pointRes"; version="1.1.3"; sha256="0yfzidc93ghpf116lxbx4fr0d71wl79y3nz6mkirx4pli6gb8x8d"; depends=[ggplot2 gridExtra plyr TripleR]; }; - pointblank = derive2 { name="pointblank"; version="0.6.0"; sha256="07hafgzyfg9r5xp9pilc9zdnk214db8ixv1ghspmrsprb9cr6qv8"; depends=[base64enc blastula cli DBI dbplyr digest dplyr fs ggforce ggplot2 glue gt htmltools knitr log4r magrittr rlang scales testthat tibble tidyselect yaml]; }; + pointblank = derive2 { name="pointblank"; version="0.7.0"; sha256="1ss6792l9sv9mr2z457b7dv9qrzx8r9wl01iy4rk7gykm7lqflss"; depends=[base64enc blastula cli DBI dbplyr digest dplyr fs glue gt htmltools knitr magrittr rlang scales testthat tibble tidyr tidyselect yaml]; }; pointdensityP = derive2 { name="pointdensityP"; version="0.3.5"; sha256="0n7p3b77m47avbr7n85knf31m9rlp43mdl3748ysj6wvxvhnivx4"; depends=[data_table]; }; - pointr = derive2 { name="pointr"; version="0.1.0"; sha256="0gdzm80r7jdwg1lv8qh902kqpqbz5b38w8lg3b9qr9k9wbir1cl9"; depends=[stringr]; }; + pointr = derive2 { name="pointr"; version="0.2.0"; sha256="1qfxcyzi2sa49x00hidz054njj9mm7gkhv99faafb9x4gp3pcq0v"; depends=[stringr]; }; poio = derive2 { name="poio"; version="0.0-4"; sha256="12d47hn9rsx2n0fl107dpswfklnh8nkm0kspcxf7yfljayvxr474"; depends=[assertive_base assertive_files assertive_properties assertive_sets assertive_strings assertive_types devtools digest dplyr magrittr purrr R6 stringi tibble whoami]; }; poisDoubleSamp = derive2 { name="poisDoubleSamp"; version="1.1"; sha256="13wyj9jf161218y4zjv2haavlmanihp9l59cvh7x8pfr9dh2dwr8"; depends=[Rcpp]; }; poisFErobust = derive2 { name="poisFErobust"; version="2.0.0"; sha256="1i6y3745i385y3r45i0xk7ciw1k6brmn709k5qhx8xphq0k4an5n"; depends=[data_table glmmML]; }; poisbinom = derive2 { name="poisbinom"; version="1.0.1"; sha256="0mjxg0s3nck7qrmq4bbrhwxfwr6fqml54s9k8q1mkfzlifa7qyf7"; depends=[Rcpp]; }; - poismf = derive2 { name="poismf"; version="0.2.6"; sha256="04fs4yl7zl3hr8qjzmn7kldkfgqak38x2ryjx1byxv0q5rf5m27f"; depends=[Matrix]; }; + poismf = derive2 { name="poismf"; version="0.3.0"; sha256="060qhqwq9qv6x8n78j45kli798xd3gihsayy2vrif2jn2q4ijqs6"; depends=[Matrix]; }; poisson = derive2 { name="poisson"; version="1.0"; sha256="1diyf1b84sr6iai3ghd3kcp6fc6w7fan49wzs1lzvxxsmp15ag2d"; depends=[]; }; poisson_glm_mix = derive2 { name="poisson.glm.mix"; version="1.2"; sha256="0328m279jfa1fasi9ha304k4wcybzr7hldww7wn0cl7anfxykbv8"; depends=[]; }; poissonMT = derive2 { name="poissonMT"; version="0.3-5"; sha256="14qkc8qz3423b13gp6gsp8cbb1nv9wwjjfa4i9zc15qy5i99ha26"; depends=[checkmate MASS robcbi robustbase]; }; poissonreg = derive2 { name="poissonreg"; version="0.1.0"; sha256="0s907j8s1s78944ik2r0qpppj1q58crkz73c9jyalkbd169578fx"; depends=[dplyr glue parsnip purrr rlang tibble tidyr]; }; - poistweedie = derive2 { name="poistweedie"; version="1.0"; sha256="18992fafypds3qsb52c09fasm3hzlyh5zya6cw32wnhipmda643m"; depends=[]; }; + poistweedie = derive2 { name="poistweedie"; version="1.0.1"; sha256="0236cz8fn3la7df8mk1la8hmr0zzjc1majnq8p0c8grma833j6kp"; depends=[]; }; poker = derive2 { name="poker"; version="0.8.8"; sha256="14ik77440z22k4kwq0p1fn7adzi0p8mh8j8hd7ayinvrab4b5r85"; depends=[]; }; - polAr = derive2 { name="polAr"; version="0.2.0"; sha256="0xk8bnb381k3x93wp29rfzb4iwvp3bkn9zfw82cbwynkfc0vyv4c"; depends=[assertthat attempt cowplot curl dplyr DT forcats formattable geofacet ggparliament ggplot2 ggtext ggthemes glue gt jsonlite lubridate magrittr purrr RColorBrewer readr rlang rvest scales sf stringr tibble tidyr wordcloud2 xml2]; }; polaroid = derive2 { name="polaroid"; version="0.0.1"; sha256="0m3jbiz4n7mgbbdkd28m6dqsclyjcgshpxd6ws8df7zchx7fch07"; depends=[argonDash argonR colourpicker ggplot2 hexSticker png shiny shinyWidgets]; }; - policytree = derive2 { name="policytree"; version="1.0.3"; sha256="1vwsimk3kirk7wlwc7b885fflbg9czzjxr4f8h20vhcm8mcz8ay8"; depends=[BH grf Rcpp]; }; + policytree = derive2 { name="policytree"; version="1.0.4"; sha256="0g5ww06f8camqyrfva0m98s8my9a4cy231p69wlpb83vgnqm3hcq"; depends=[BH grf Rcpp]; }; poliscidata = derive2 { name="poliscidata"; version="2.3.0"; sha256="1ywfhksc6gcc2xk5lp6s8nn4wib92sv7p3wq92dzabf75q6mscix"; depends=[abind car descr gplots Hmisc plotrix plyr survey weights xtable]; }; - polished = derive2 { name="polished"; version="0.2.0"; sha256="1850is9rv08wad5rh8i0pqiwdaqx82pmificmzrk8ysirddildpn"; depends=[digest dplyr DT htmltools httr jose jsonlite lubridate purrr R6 rlang shiny shinycssloaders shinydashboard shinydashboardPlus shinyFeedback shinyjs shinyWidgets stringr tibble tidyr uuid]; }; + polished = derive2 { name="polished"; version="0.3.0"; sha256="0wcigi4x2ry34k0350zvcwm1q0iw1vbd6nvvknl1w1s34fc559vz"; depends=[automagic cli digest dplyr DT htmltools httr jose jsonlite lubridate purrr R6 rlang shiny shinycssloaders shinydashboard shinyFeedback shinyjs shinyWidgets stringr tibble tidyr uuid yaml]; }; polite = derive2 { name="polite"; version="0.1.1"; sha256="15hiifaf63hx0xn453lr0xhdnxqifrgyrgrymp0a9k3j7qja59jk"; depends=[here httr magrittr memoise ratelimitr robotstxt rvest usethis]; }; - politeness = derive2 { name="politeness"; version="0.7.5"; sha256="0j9rnms23gqymv6q1il7d2d7pmglj0g3i4dbq7d6jdwxh8y5dp11"; depends=[data_table ggplot2 glmnet quanteda spacyr stringr textclean textir tm]; }; - politicaldata = derive2 { name="politicaldata"; version="0.1.3"; sha256="1n25k53mmlmmg9p9a36jh4z6xhl1yyv9v1c56mav873105h359wi"; depends=[]; }; + politeness = derive2 { name="politeness"; version="0.7.8"; sha256="0nn076p64vah9pcmfkiig6j23zs1vgj36py0vmj5dmn16h391s2h"; depends=[data_table ggplot2 glmnet quanteda spacyr stringi stringr textir tm]; }; pollen = derive2 { name="pollen"; version="0.72.0"; sha256="0plxc7rys5q4c1dwammv3b2pnys1hdh5ic0b2ndmv5cbyspf2h0y"; depends=[dplyr lubridate purrr]; }; pollimetry = derive2 { name="pollimetry"; version="1.0.1"; sha256="09zmcwlgzl4fnkdg2m424ibv3izzrm595c7pi4mc3bd1g8sa2ypn"; depends=[brms repmis]; }; pollstR = derive2 { name="pollstR"; version="2.0.1"; sha256="13g5z1hix1bmsxznq5qx82yf445rvvyn67ch9bihxm1hr4cr4sbl"; depends=[httr lubridate purrr stringr]; }; pollster = derive2 { name="pollster"; version="0.1.3"; sha256="1b5m5g9v8xbs3zz6as4xvzwaqr39477adi4vzxmjvxjsaij6ih5h"; depends=[dplyr forcats labelled rlang stringr tidyr]; }; polmineR = derive2 { name="polmineR"; version="0.8.5"; sha256="1jb6j0rmcwzszympzfia8vml55fw2rybj2qcv3f54v3cr9hw13ga"; depends=[data_table DT jsonlite knitr magrittr Matrix pbapply RcppCWB slam stringi tm xml2]; }; polspline = derive2 { name="polspline"; version="1.1.19"; sha256="0rhzf735hmbqfn2xbgcln4sqx7m9far72g5gq9mghgkw016kqglm"; depends=[]; }; - polyCub = derive2 { name="polyCub"; version="0.7.1"; sha256="0ln1n5w64vgq63gm4mm9wzl9lbp7ppgaxg0ba0yw0xsr5cmkyp37"; depends=[sp]; }; + polyCub = derive2 { name="polyCub"; version="0.8.0"; sha256="1f63ikiz988hdihvgd5f2p897qfgv54ysgp2h8avmlc4cj6hgkgl"; depends=[sp]; }; polyMatrix = derive2 { name="polyMatrix"; version="0.3.1"; sha256="0k62cidsmryg64vbs1ar24m1dknxpddzqvdxbyk3n85r9cx3sqcv"; depends=[MTS polynom]; }; polyPK = derive2 { name="polyPK"; version="3.1.0"; sha256="0cb83sq8iz4swr73vwhh8n4k62p6321nsy1sz5fba0wiicycxf55"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD mixOmics pcaMethods pkr plyr ropls sqldf xlsx]; }; - polyRAD = derive2 { name="polyRAD"; version="1.2"; sha256="10j414h1x0ac9vbmhw19486an0x4bqr1hcyx7znaqq8bqg7vajgb"; depends=[fastmatch pcaMethods Rcpp]; }; + polyRAD = derive2 { name="polyRAD"; version="1.4"; sha256="17bjwjmq94ww4xl0x7frmbrn8kkz3gqrq4d644f05n5hx66hsdys"; depends=[fastmatch pcaMethods Rcpp]; }; polySegratio = derive2 { name="polySegratio"; version="0.2-5"; sha256="0djw49mbhd7x6jr0f5qkb9akw3fw3ax4w9xv8iwa5f65q5gbxpdf"; depends=[gdata]; }; polySegratioMM = derive2 { name="polySegratioMM"; version="0.6-4"; sha256="162xj52566kaxgfk7c14170xx07isyjmqb9skvhrdg7sz20lc3l1"; depends=[coda gtools lattice polySegratio]; }; polyaAeppli = derive2 { name="polyaAeppli"; version="2.0"; sha256="0kyz3ap92xz7aqyviyrpggfmicy1gybrx7y19djsmixcwz53zqch"; depends=[]; }; @@ -12872,47 +13389,49 @@ in with self; { polyfreqs = derive2 { name="polyfreqs"; version="1.0.2"; sha256="13859vbpys5yj1qiapyzv9wlvi6x6k0rm335bsi1v07ch3x2bh3b"; depends=[Rcpp]; }; polyglot = derive2 { name="polyglot"; version="0.3.0"; sha256="1mmmdqaq882qys41lmm009ncg9s9h5x1q8psv0v3pwpar0d7vgff"; depends=[magick pins]; }; polylabelr = derive2 { name="polylabelr"; version="0.2.0"; sha256="01b2v0l5g8nxwbd6nwqv8ahypgh6gfhd4qabg75brlj7z1iyfzf2"; depends=[Rcpp]; }; - polymapR = derive2 { name="polymapR"; version="1.1.1"; sha256="058xx8h660kckd7xcwv6i60dfjbhcid6kqhbckq5s37d549givbx"; depends=[doParallel foreach igraph knitr MDSMap]; }; + polymapR = derive2 { name="polymapR"; version="1.1.2"; sha256="0pgwyw6d7myx0ds5dmfwzrnmvzsm1gkpz9qc241isr9d4cj1dinn"; depends=[doParallel foreach igraph knitr MDSMap]; }; polynom = derive2 { name="polynom"; version="1.4-0"; sha256="1pflscwc0qzdf0y60j7s0dkglgmz18xajywfbn6s263idyr8idy5"; depends=[]; }; polypoly = derive2 { name="polypoly"; version="0.0.2"; sha256="00c1hrnf575awvh0rlsnf6nkgi9p3fnqhd1knamkgb4icwi5s46d"; depends=[ggplot2 reshape2 rlang tibble]; }; - polyqtlR = derive2 { name="polyqtlR"; version="0.0.4"; sha256="1ac1pr11b5aaa2f1kw7qxh4ikx2wwb477sm20rpppjqzkfzsi6hj"; depends=[abind doParallel foreach Hmisc knitr nlme RColorBrewer Rcpp RcppArmadillo reshape2 rmarkdown]; }; + polyqtlR = derive2 { name="polyqtlR"; version="0.0.5"; sha256="12anrl8l0kjl3y5kprrjjgjcjkp4c2cpkl7dynfwmd6bx39f2gkk"; depends=[abind doParallel foreach Hmisc knitr nlme RColorBrewer Rcpp RcppArmadillo reshape2]; }; polyreg = derive2 { name="polyreg"; version="0.6.7"; sha256="1znl46m4zfd0f4qwg3r2anz3nyn8hk607772pzxiwj5w3xc96g56"; depends=[dummies nnet partools regtools RSpectra]; }; polysat = derive2 { name="polysat"; version="1.7-4"; sha256="08jmkik4s2171znp3w4i0v0g0k2s0di3xqwr9sf9hyd0sf8af8dp"; depends=[Rcpp]; }; polywog = derive2 { name="polywog"; version="0.4-1"; sha256="02qk1cyvkd77mwlvhj1zzzi0bmy7qxz29j2v730wp7rz4w7h5x5n"; depends=[foreach Formula glmnet iterators Matrix miscTools ncvreg Rcpp stringr]; }; pom = derive2 { name="pom"; version="1.1"; sha256="02jv19apn0kmp1ric2cxajlaad2fmsz4nm4izd2c3691vzas7l83"; depends=[matrixcalc]; }; + pomcheckr = derive2 { name="pomcheckr"; version="0.1.0"; sha256="1kbsz32y4fp6a579rqyfxa2g1v6j19wgs20696ywshalv7q842lj"; depends=[assertthat dplyr ggplot2 magrittr rlang stringr tidyr]; }; pomdp = derive2 { name="pomdp"; version="0.99.0"; sha256="0plqmxzq46vgyg7365rp1m36ih5lll1kmj195iycwvsa1qaadw92"; depends=[igraph Ternary visNetwork]; }; - pomp = derive2 { name="pomp"; version="3.2"; sha256="0lnw7i35z5k0p5r4nm8xx2iszvrv21q7cp3wav45r6vg7via708j"; depends=[coda deSolve digest magrittr mvtnorm plyr reshape2]; }; - pompom = derive2 { name="pompom"; version="0.2.0"; sha256="1alz3lrj7m16vhymsvvrcmf0kmgx88q2f3v4j6wiciqv77bnyai1"; depends=[ggplot2 lavaan qgraph reshape2]; }; + pomp = derive2 { name="pomp"; version="3.3"; sha256="0mil709q037ys7abfhinya0rkavilyv6ii0dh9chjss1kn05aih3"; depends=[coda deSolve digest magrittr mvtnorm plyr reshape2]; }; + pompom = derive2 { name="pompom"; version="0.2.1"; sha256="09jy4lrb2p71yk604ndfhqfz6znlc3bq72k42f0d1i1a8g3by8h6"; depends=[ggplot2 lavaan qgraph reshape2]; }; pooh = derive2 { name="pooh"; version="0.3-2"; sha256="0qwa5j91aypasvsf4xcfbl6lz7llawdr38jiflzmfak2ad72rv7j"; depends=[]; }; - pool = derive2 { name="pool"; version="0.1.5"; sha256="0h3mnz6211q16jw8bv8w9948x45wy12w1dsxn97cc4y841qa5hp5"; depends=[DBI later R6]; }; + pool = derive2 { name="pool"; version="0.1.6"; sha256="1qfraam1rc2r4mn7yhhfv8lhhc4dzgq0v1y97n4h2z3mgxn5zgnd"; depends=[DBI later R6]; }; poolVIM = derive2 { name="poolVIM"; version="1.0.0"; sha256="19yw6pp5l3jmla4wjbvpjq132f645yks49pzsdv123f3qfr8f0m6"; depends=[EmpiricalBrownsMethod Hmisc ranger]; }; poolfstat = derive2 { name="poolfstat"; version="1.2.0"; sha256="064arw174kn919qv5bvfyiva0gc21rx163yabrrnli3fkpvaf57q"; depends=[doParallel foreach Rcpp]; }; pooling = derive2 { name="pooling"; version="1.1.2"; sha256="19mrzax3k35fhgjpnlrigf0nscsdl3xb7k82s5q472k4bcz7ya5b"; depends=[cubature data_table dplyr dvmisc ggplot2 ggrepel mvtnorm numDeriv]; }; poolr = derive2 { name="poolr"; version="0.8-2"; sha256="1rkfnrz5x7f9kqpivj0gvs3fxfb9agnm8sybb7wmvvcsmshzrpkf"; depends=[Matrix]; }; - poorman = derive2 { name="poorman"; version="0.2.4"; sha256="12s1pw1cy60hha3cspzxra8xw70wfwa2827yg2sy4jpn81xnacc8"; depends=[]; }; + poorman = derive2 { name="poorman"; version="0.2.5"; sha256="05h7rjgri0b5a1jd0388p7lqvvg0y8z6g42f9bxc80jg1z730axr"; depends=[]; }; pop = derive2 { name="pop"; version="0.1"; sha256="0hbxdrkasb69x7ipddvyrzl5vvc7dd6rzj1vy7v3chg3rzgq89cj"; depends=[igraph MASS]; }; popEpi = derive2 { name="popEpi"; version="0.4.8"; sha256="1gc7kyik0209pc8mvl6c69lzb3dnkif0mby4l4pq8zfdz73lmi06"; depends=[data_table Epi survival]; }; popKorn = derive2 { name="popKorn"; version="0.3-0"; sha256="1zcl6ms7ghbcjyjgfg35h37ma8nspg15rk2ik82yalqlzxjf7kxw"; depends=[boot]; }; + popPCR = derive2 { name="popPCR"; version="0.1.1.1"; sha256="03ppgjmdp3rivlgqs7aq082j4rzndf9fw5aq8mzci7fvjkj7whc4"; depends=[mvtnorm]; }; popReconstruct = derive2 { name="popReconstruct"; version="1.0-6"; sha256="0nmf93dy2qf7z9mafpy99ry53aapbxlismn7drn732r8gvravapx"; depends=[coda]; }; popbio = derive2 { name="popbio"; version="2.7"; sha256="02dbb2sinn1n8a9dg8lvf35sc8hb14c90mjymz2gk64xdysf0m2j"; depends=[]; }; popdemo = derive2 { name="popdemo"; version="1.3-0"; sha256="0760ajqaq822m0j092gdqzhgw1mk413k09mmmwyzb0jzj6bd15q3"; depends=[expm MCMCpack]; }; - popgenr = derive2 { name="popgenr"; version="0.1"; sha256="1lidddf8p1z4bja9dabzmak6rzfyqwch046h79yc96c11rv36l4j"; depends=[]; }; - popkin = derive2 { name="popkin"; version="1.3.0"; sha256="1gr2glyavvf2r89zwiama3qhmq32rdzjsqkhv70afmsapk6f4dhr"; depends=[RColorBrewer Rcpp RcppEigen]; }; - poppr = derive2 { name="poppr"; version="2.8.6"; sha256="0c1blca4bcimqpsfl9xrdwhmyxrasg8yb7xgrwl4hk8f3av3i25l"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn polysat progressr rlang shiny vegan]; }; - popprxl = derive2 { name="popprxl"; version="0.1.4"; sha256="076aia4qbq5yw2nxafq2ys5n5c7wv77i8k1nmzb3all193vjf203"; depends=[poppr readxl]; }; - popsom = derive2 { name="popsom"; version="5.0"; sha256="0598qzqn1yws96628azn3q56804vlwq6b28ydfrr3pf5nds71krd"; depends=[fields ggplot2 hash]; }; + popgenr = derive2 { name="popgenr"; version="0.2"; sha256="164dhizka0yadzihbjqkfs5p0hknw966mq0grigs7r9ppbq9kajh"; depends=[]; }; + popkin = derive2 { name="popkin"; version="1.3.8"; sha256="042yqbmnq7zqi5f4z9ys105xxbjfp3s72jmxm5y4aavh0krsan2j"; depends=[RColorBrewer Rcpp RcppEigen]; }; + poppr = derive2 { name="poppr"; version="2.9.1"; sha256="0rsnyg40gy3294j7vn9hgwjf2kyky8wgpkqklwr3110rna5mhsx6"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas polysat progressr rlang shiny vegan]; }; + popsom = derive2 { name="popsom"; version="5.1"; sha256="0ajldw618b5m3m8y5icgz7ahc6sr0x0hhakcabwzck2ryvhqxmbp"; depends=[fields ggplot2 hash]; }; poptrend = derive2 { name="poptrend"; version="0.1.0"; sha256="0hypxpb18azg6q1mqrphbx3x262h9ybwhlkb8fyd6vr7jjb5wn3h"; depends=[mgcv]; }; populationPDXdesign = derive2 { name="populationPDXdesign"; version="1.0.3"; sha256="0p73ddv3j1s1vs4j3axnsf39n626qjv0w1qlq9p7km4s6729bhgv"; depends=[devtools ggplot2 plyr roxygen2 shiny shinycssloaders]; }; - porridge = derive2 { name="porridge"; version="0.1.0"; sha256="1c71bgq868gw4a8xsfj0qbvcw9bnm6vvbrsbzr31r30fbixjy2j6"; depends=[MASS mvtnorm Rcpp RcppArmadillo]; }; - portalr = derive2 { name="portalr"; version="0.3.6"; sha256="1zvhnwayib78sjvldl1ydafj0f9k0nzhq1gamfaki45vhn7hpasf"; depends=[clipr clisymbols crayon dplyr forecast gh httr lubridate lunar magrittr rlang tidyr tidyselect zoo]; }; + porridge = derive2 { name="porridge"; version="0.2.1"; sha256="03ay6nwq0x3vvpicb50zk2l14hfa6hi51j6cc559p6gzcwf70pj1"; depends=[MASS mvtnorm Rcpp RcppArmadillo]; }; + portalr = derive2 { name="portalr"; version="0.3.7"; sha256="1n3z6xdh28n33yf7w5dbr0ilqdw6qb11msnv0mf0x2xml495048b"; depends=[clipr clisymbols crayon dplyr forecast gh httr lubridate lunar magrittr rlang tidyr tidyselect zoo]; }; portes = derive2 { name="portes"; version="5.0"; sha256="1iarvgz23979lipqyyvh8h0nd978p1nzbbjf020q11yqpl863502"; depends=[forecast]; }; portfolio_optimization = derive2 { name="portfolio.optimization"; version="1.0-0"; sha256="1rdhwffsjc1pa1qq7rqy6dwk8yrcblkmijz94p2w7sf2v4jmwxxr"; depends=[magrittr MASS modopt_matlab xts]; }; - portfolioBacktest = derive2 { name="portfolioBacktest"; version="0.2.2"; sha256="095f84d448dwh9ycp64ngn1pfm72n2b8d61w2vyd6mk3gh24361i"; depends=[digest doSNOW evaluate foreach ggplot2 PerformanceAnalytics quadprog quantmod R_utils rlang snow xts zoo]; }; + portfolioBacktest = derive2 { name="portfolioBacktest"; version="0.2.3"; sha256="1xcg8yra9akl362qynfahsc7wgahlb0y73b9698nympcq8m6ailh"; depends=[digest evaluate ggplot2 pbapply PerformanceAnalytics quadprog quantmod R_utils rlang xts zoo]; }; portsort = derive2 { name="portsort"; version="0.1.0"; sha256="0swl39dn7lzwvps18bva4l64a441gkf6lbwcwrhlf93f1ardvxji"; depends=[xts zoo]; }; postDoubleR = derive2 { name="postDoubleR"; version="1.4.12"; sha256="19z8wisi16g7a78gw16r72dkxh3x5qh888qz260ih5naq0p8vy71"; depends=[doParallel ggplot2 glmnet grf neuralnet progress]; }; + postGGIR = derive2 { name="postGGIR"; version="1.0.0"; sha256="16flv8j1k3bq3if6yy0g0mi7y55pkl223xwl56xzay3pbsjma6sc"; depends=[abind accelerometry cosinor denseFLMM dplyr GGIR ineq kableExtra minpack_lm refund survival tidyr xlsx zoo]; }; postGIStools = derive2 { name="postGIStools"; version="0.2.4"; sha256="04d6iqnk7j2lgv1h5c94j6y89jk75pmv26sxa51s5iwkjq7rchym"; depends=[DBI jsonlite rgdal rgeos RPostgreSQL sp stringr]; }; postHoc = derive2 { name="postHoc"; version="0.1.3"; sha256="1l7r9md9iyav5vvjykpsnqv9whspzcmnppfpqm6qy5s5vk6b8zfd"; depends=[igraph multcomp]; }; - postcards = derive2 { name="postcards"; version="0.1.0"; sha256="0y1hvjwf85hiaffqwv8pk9yyazn01ch311c84nd5qr5f39cm4l4v"; depends=[rmarkdown]; }; + postcards = derive2 { name="postcards"; version="0.2.0"; sha256="13pd312bi5skxr17f8wsfx0z81saq2sskb77lq93bpln1s7ils1r"; depends=[rmarkdown rstudioapi]; }; posterdown = derive2 { name="posterdown"; version="1.0"; sha256="13plrrnylw3yldm0md1gr5drccfjk9f2wwlhz6lrmb3px7w5nqs0"; depends=[pagedown rmarkdown yaml]; }; postinfectious = derive2 { name="postinfectious"; version="0.1.0"; sha256="1v327zxxiwc1cdksk6s39lkkgck5dxg169pp3jiqmm7xs35dcl6y"; depends=[]; }; postlightmercury = derive2 { name="postlightmercury"; version="1.2"; sha256="1345ckp50jplcdqp3a250c6mhapqh9322jzpxj5dyqmbg2nmgp9i"; depends=[crul jsonlite purrr rvest tibble xml2]; }; @@ -12922,17 +13441,17 @@ in with self; { potts = derive2 { name="potts"; version="0.5-9"; sha256="1kiha209w9nyyx4qqsdp51q2y7ny67nzqkdanlrh2106lcab3hj8"; depends=[]; }; pould = derive2 { name="pould"; version="1.0.1"; sha256="0hr6j08whbc1jydz20rg0cphfiwx4pyrav49w9qs9dkcaqrpid7l"; depends=[BIGDAWG gap ggplot2 haplo_stats reshape2]; }; povcalnetR = derive2 { name="povcalnetR"; version="0.1.1"; sha256="0ah6n3wpjiwyh0mancqqpvyknx25dxr13p0nqnrfzmhfwyaywar0"; depends=[dplyr httr js jsonlite memoise naniar purrr readr stringr tibble tidyr]; }; - powdR = derive2 { name="powdR"; version="1.2.4"; sha256="177gzp60fvx0sk4a2vhpi37785qwn8gb6s2h9i8abys6z2qmlmg0"; depends=[baseline DT ggplot2 ggpubr nnls plotly plyr reshape shiny shinyWidgets tidyr]; }; + powdR = derive2 { name="powdR"; version="1.2.5"; sha256="0gf83w34wrkdn03wa5pwsahycykcxfzk2bnmrbbkwafpnr99a9aj"; depends=[baseline DT ggplot2 ggpubr nnls plotly plyr reshape shiny shinyWidgets tidyr]; }; powdist = derive2 { name="powdist"; version="0.1.4"; sha256="1my88ag5q9hwkn2wy79jl9008gpvg0bsrnyc81gkdfi7pjh2mp1z"; depends=[gamlss_dist normalp rmutil]; }; poweRlaw = derive2 { name="poweRlaw"; version="0.70.6"; sha256="14d1myxllvm1grnfiszzzxaiqpb2jpmsi19wq70r8r2wki293h7g"; depends=[pracma]; }; powerAnalysis = derive2 { name="powerAnalysis"; version="0.2.1"; sha256="0cma4v402n6wcb2gy9g1ymydzh8vimy9nfrrn8xhnjsf7x6jh215"; depends=[]; }; powerCompRisk = derive2 { name="powerCompRisk"; version="1.0.1"; sha256="11xprjn9hzi8gxrsi7wivwgchg9h2apgxa63fp466ngjfy5ybxf4"; depends=[mvtnorm]; }; - powerEQTL = derive2 { name="powerEQTL"; version="0.2.2"; sha256="0n36hclwqphc5fjyj9adah25w2x0mc1fg2k7480xwmrcx5d6h47y"; depends=[]; }; + powerEQTL = derive2 { name="powerEQTL"; version="0.2.9"; sha256="1549z461q5img2ycsbdriirbyxy7bd2yshvxnn90svx771g4ghzp"; depends=[GLMMadaptive glmmTMB nlme]; }; powerGWASinteraction = derive2 { name="powerGWASinteraction"; version="1.1.3"; sha256="1i8gfsk9qzx54yn661i4x9k7n7b6r1jd808wv1hcq7870mzyb27k"; depends=[mvtnorm pwr]; }; powerLATE = derive2 { name="powerLATE"; version="0.1.1"; sha256="1dmvvh7ynvr8krl5p1qbg8ib1s595vqci2r80zmwsm28jhv8ka4w"; depends=[]; }; - powerMediation = derive2 { name="powerMediation"; version="0.3.2"; sha256="06liw58hwvd5n55axwldrngwfqckmi5yh2i9b2c75cghqdnihvby"; depends=[]; }; - powerSurvEpi = derive2 { name="powerSurvEpi"; version="0.1.0"; sha256="1xxicvw113mc2y889rklws3xml5z64sgjpn4wg95gbw6nadch7zz"; depends=[survival]; }; - powerbydesign = derive2 { name="powerbydesign"; version="1.0.4"; sha256="0xd4hylx7jl4ksycz5gfjcgy92mh5c9d4r34ap1g81ybmyk7yrsj"; depends=[gdata ggplot2 lme4 MASS plyr reshape2 stringr]; }; + powerMediation = derive2 { name="powerMediation"; version="0.3.4"; sha256="08zszskhd21pbjamch5q7v7vx2p78c1d53zrp31hmpxk1ymx2xf3"; depends=[]; }; + powerSurvEpi = derive2 { name="powerSurvEpi"; version="0.1.3"; sha256="1p1fw4jq4rxc273hmycxf4bkqm6zmfw0jdy2s65jy10q37r53ial"; depends=[pracma survival]; }; + powerbydesign = derive2 { name="powerbydesign"; version="1.0.5"; sha256="006m127rc49bshgljd5d3ii6sfx24ndn2690ixj0vnqm2dp3zjnw"; depends=[gdata ggplot2 lme4 MASS plyr reshape2 stringr]; }; powerlmm = derive2 { name="powerlmm"; version="0.4.0"; sha256="0dpfvbp54lhz7ibzihqqrbl45s6dqxn6qyvv39mk2166hjcgi1h2"; depends=[lme4 MASS Matrix scales]; }; powerpkg = derive2 { name="powerpkg"; version="1.5"; sha256="0mbk2fda2fvyp1h5lk5b1fg398xybbjv0z6kdx7w7xj345misf7l"; depends=[]; }; powerplus = derive2 { name="powerplus"; version="3.1"; sha256="0ayp6x34hkzgris4j3zbbs0r23n81bhww3wgfyy630ri4sk6brrn"; depends=[complexplus expm MASS Matrix phonTools]; }; @@ -12941,105 +13460,110 @@ in with self; { ppclust = derive2 { name="ppclust"; version="1.1.0"; sha256="0vmgjjy7gin88qailzfcwapndl5s8fm6i8kw9gv6aykg9mr75xlv"; depends=[inaparc MASS]; }; ppcong = derive2 { name="ppcong"; version="0.0.2"; sha256="0k34ibzyxak2a8xhsf4jdp50w8k8dsd1nn3gcdcakx8s2rgymq7v"; depends=[curl jsonlite tfse tibble]; }; ppcor = derive2 { name="ppcor"; version="1.1"; sha256="1x9b2kb8s0bp92b17gby0jwzzr3i4cf3ap9c4nq7m8fav72g0y3a"; depends=[MASS]; }; + ppdiag = derive2 { name="ppdiag"; version="0.1.0"; sha256="15wva4w3l137ipsj0hx9f1qa206l58ml1qf521aj11r73qy75j2k"; depends=[]; }; ppgam = derive2 { name="ppgam"; version="1.0.1"; sha256="0w2jci5k0y8m7rapj8w6xq849y59m7y4fp9n3f5l6q954mbc6bv0"; depends=[evgam MASS mgcv]; }; ppgmmga = derive2 { name="ppgmmga"; version="1.2"; sha256="1dq0p3xna5r1kiyhiziz3wc78dfqh362qhna5hmkjzhljawr9jg0"; depends=[cli crayon GA ggplot2 ggthemes mclust Rcpp RcppArmadillo]; }; ppitables = derive2 { name="ppitables"; version="0.5.4"; sha256="0hssk8yf8f15x7m03x71v9yrshrzgkww8xfacbbsw5mpqcghc9zl"; depends=[tibble tidyr]; }; ppmHR = derive2 { name="ppmHR"; version="1.0"; sha256="1fc9rrk3ir3dq5d518ih67dvknhz1ln6668wy2mzsdndaysgm12g"; depends=[nleqslv]; }; - ppmSuite = derive2 { name="ppmSuite"; version="0.1.1"; sha256="0n26nfx5wkyrqvrdl4swvxb3pp4cr8kci7inkikwq7pssxgzlfpj"; depends=[]; }; - ppmlasso = derive2 { name="ppmlasso"; version="1.1"; sha256="1w13p1wjl1csds1xfc79m44rlym9id9gwnp3q0bzw05f35zbfryg"; depends=[spatstat]; }; - pps = derive2 { name="pps"; version="0.94"; sha256="0sirxpagqc2ghc01zc6q4dk691six9wkgknfbwaqxbxvda3hcmyq"; depends=[]; }; + ppmSuite = derive2 { name="ppmSuite"; version="0.1.3"; sha256="0wi8cmjvz5vizvqzcrkagh2y2pjz372jc0xwzyi4p1d63cnwdhkq"; depends=[]; }; + pps = derive2 { name="pps"; version="1.0"; sha256="0k06rkzdx07qcndqym44q6xyawdd253i3kbyqlmlavadsizp657g"; depends=[]; }; ppsbm = derive2 { name="ppsbm"; version="0.2.2"; sha256="0y4whxv14jqx7mqxj7n427vpbxb5rkwj8xvx0mj4knnwy9v437z4"; depends=[clue gtools Rfast]; }; + ppsr = derive2 { name="ppsr"; version="0.0.2"; sha256="1dk62b08sxp87kll8wjfby3iq9l3akiprarh8agjdv6s43c9h2sg"; depends=[ggplot2 gridExtra parsnip rpart withr]; }; pqantimalarials = derive2 { name="pqantimalarials"; version="0.2"; sha256="0azxkf1rvk9cyzr4gbp4y2vcxrxw3d4f002d5gjkvv1f4kx8faw1"; depends=[plyr RColorBrewer reshape2 shiny]; }; prLogistic = derive2 { name="prLogistic"; version="1.2"; sha256="1abwz7nqkz2qbyqyr603kl9a3rkad3f4vxhck6a9kl80xrmfrj9s"; depends=[boot Hmisc lme4]; }; prWarp = derive2 { name="prWarp"; version="1.0.0"; sha256="1rx9yby7xwa2bgqa6a1zllan6qfchgfrg2waadmwfmjhcp8qb1mj"; depends=[Morpho]; }; prabclus = derive2 { name="prabclus"; version="2.3-2"; sha256="0hg4d7y1w18jpgvw10z8833bbbcnlkwiasx0wh6iwa2pnnybq8gl"; depends=[MASS mclust]; }; - pracma = derive2 { name="pracma"; version="2.2.9"; sha256="07mzhzz73wsjjw1q05l024gcd13hwnzsxf873q9dyhw6x3shzshc"; depends=[]; }; + pracma = derive2 { name="pracma"; version="2.3.3"; sha256="0g5r5ir5k43ba0ngnsanp108k479l2dnsjd5w6idk1d34ivqs7yg"; depends=[]; }; pragma = derive2 { name="pragma"; version="0.1.3"; sha256="1n30a346pph4d8cj4p4qx2l6fnwhkxa8yxdisx47pix376ljpjfx"; depends=[]; }; prais = derive2 { name="prais"; version="1.1.1"; sha256="027qsa1nc680bcs61dlyz0wwap5pgxdfzasg9ny37a55hnikxid5"; depends=[lmtest sandwich]; }; praise = derive2 { name="praise"; version="1.0.0"; sha256="1gfyypnvmih97p2r0php9qa39grzqpsdbq5g0fdsbpq5zms5w0sw"; depends=[]; }; praktikum = derive2 { name="praktikum"; version="0.1"; sha256="0kkydgglvqw371fxh46fi86fmdndhwq1n8qj0ynbh2gz1cn86aw1"; depends=[]; }; praznik = derive2 { name="praznik"; version="8.0.0"; sha256="037lcic87b6136b5fi9g557idd3rvglw995b94xadcdaqcpy906z"; depends=[]; }; - prcbench = derive2 { name="prcbench"; version="0.8.2"; sha256="1b8dmahkymbnf3xxaprzkpizpibnyhjynv352qf4c7l5gvg0d7nq"; depends=[assertthat ggplot2 gridExtra memoise precrec PRROC R6 rJava ROCR]; }; + prcbench = derive2 { name="prcbench"; version="1.0.1"; sha256="1n7f9qn0vz86ir4byvni4fi5x2xa8sdzpb54hwc0b34xy2wjm204"; depends=[assertthat ggplot2 gridExtra memoise precrec PRROC R6 rJava ROCR]; }; prclust = derive2 { name="prclust"; version="1.3"; sha256="0p0sf8248aigs99py8mpzz743jnrf7n1nv5shag15arxz9yx7zn3"; depends=[Rcpp]; }; prcr = derive2 { name="prcr"; version="0.2.1"; sha256="0k5vl14akqf8qvak6h7a19qxn4wzpyxq7lyvdhxfh8l4gs4ca2l6"; depends=[class dplyr forcats ggplot2 irr lpSolve magrittr purrr tibble tidyr]; }; pre = derive2 { name="pre"; version="1.0.0"; sha256="07iai8vkxmx0dhnqy28gwh1hwc2iqg7bb0mwm8c68qpp8ffxwplm"; depends=[earth Formula glmnet Matrix MatrixModels partykit rpart stringr survival]; }; - precautionary = derive2 { name="precautionary"; version="0.2-0"; sha256="13gh1h6inqzhxz3jzq4fha1g4xpyljjk6a2ng5l1jbv3jrqhm53p"; depends=[data_table dplyr escalation kableExtra knitr magrittr rlang stringr]; }; + precautionary = derive2 { name="precautionary"; version="0.2-1"; sha256="1vk2dwljh2fnhidb008dp4ma8mad49hrkq1chy9z8nsd40sbbpcl"; depends=[data_table dplyr escalation kableExtra knitr magrittr rlang stringr]; }; precintcon = derive2 { name="precintcon"; version="2.3.0"; sha256="1sf0mfqa77aqhbx3hg8pv582ibmfnv6vigqcd3xqsbq7nigy2ms9"; depends=[ggplot2 scales]; }; - precisely = derive2 { name="precisely"; version="0.1.0"; sha256="0c44qwk1w1qic6iqkjv7sxd47x9x1ikjnvd2870izzklwv2yq2ly"; depends=[dplyr ggplot2 magrittr purrr rlang shiny shinycssloaders shinythemes tidyr]; }; + precisely = derive2 { name="precisely"; version="0.1.1"; sha256="0wakzr3j7v4kpi4qf3f9m4n97nr3vajwjm6kkwg1xinli8yhsi81"; depends=[dplyr ggplot2 magrittr purrr rlang shiny shinycssloaders shinythemes tidyr]; }; precommit = derive2 { name="precommit"; version="0.1.3"; sha256="1rmzz99wvjk0wv5csi4xmf2rc23dh3y3h3jwrd13mzs2ss5kjsq3"; depends=[docopt fs here magrittr purrr R_cache rlang rprojroot rstudioapi usethis withr yaml]; }; - precrec = derive2 { name="precrec"; version="0.11.2"; sha256="1j8k48sg49qrw7ib2sv96961nmyvc4a732x20qrvs3y65d8zl1m1"; depends=[assertthat data_table ggplot2 gridExtra Rcpp]; }; + precrec = derive2 { name="precrec"; version="0.12.5"; sha256="1nz5i99ivcd8ncc41nm7sd48ga8bih39hd292d80n8dx2dpwn7kw"; depends=[assertthat data_table ggplot2 gridExtra Rcpp withr]; }; predReliability = derive2 { name="predReliability"; version="0.1.0"; sha256="18s9ijg3fcg6qb0y6pnwngmv69ajm93z0xjdzkq3fp5bxk1qylyb"; depends=[cluster rpart]; }; predhy = derive2 { name="predhy"; version="0.2.0"; sha256="0l3x9ivrlb43x3qbrpw5gjyfc3n3b4bbsav1r4hl96znypwi7j9f"; depends=[]; }; predict3d = derive2 { name="predict3d"; version="0.1.3.3"; sha256="1kb3jacpgzln1ddnkfzhvfpzzf9wig60lppca6iy0fvq5cm8ddr4"; depends=[dplyr ggiraphExtra ggplot2 magrittr modelr moonBook plyr prediction purrr reshape2 rgl rlang stringr TH_data tidyr]; }; prediction = derive2 { name="prediction"; version="0.3.14"; sha256="0awlq5lxfia6m2b91w73rksp93rbwv5gwqb36wbji4rgq41rzbrx"; depends=[data_table]; }; predictionInterval = derive2 { name="predictionInterval"; version="1.0.0"; sha256="029hc57cblfcbqckrghf95l2rkn7acgb4yr36da01bx8bmpww0bn"; depends=[ggplot2 MASS MBESS pbapply]; }; predictmeans = derive2 { name="predictmeans"; version="1.0.4"; sha256="11282jzmlkbawsh1k4582a7yh4xxfh01sn6zp5nbdsr9c9p6vqfz"; depends=[ggplot2 lme4 Matrix nlme numDeriv pbkrtest plyr]; }; - predictoR = derive2 { name="predictoR"; version="1.1.4"; sha256="1ar1qv4w4a0sw9q1n27x8lqx4n2ipfrhsz9pnd90jxk8rgx7p4jg"; depends=[ada colourpicker corrplot DT e1071 flexdashboard glmnet kknn neuralnet plyr randomForest rattle ROCR rpart shiny shinyAce shinydashboardPlus shinyjs shinyWidgets tidyverse xgboost zip]; }; - predictrace = derive2 { name="predictrace"; version="1.2.1"; sha256="1lbqyhhc3bkbfypjaxl0a96rhb596xkbmlm0ip0f3z9g6jyxcl0a"; depends=[dplyr here tidyr]; }; + predictoR = derive2 { name="predictoR"; version="1.1.9"; sha256="0vyhh6gcrmcwrda5b178sf36igixcsrllkfy94yp998h9d0sn5k2"; depends=[adabag colourpicker DT e1071 flexdashboard glmnet kknn neuralnet plyr randomForest rattle ROCR rpart shiny shinyAce shinydashboardPlus shinyjs shinyWidgets tidyverse xgboost]; }; + predictrace = derive2 { name="predictrace"; version="2.0.0"; sha256="1bk1l9gai4hyck72h81znsm1dzqwm5wddbz0bm9g5igs6zkar2ka"; depends=[dplyr]; }; predkmeans = derive2 { name="predkmeans"; version="0.1.1"; sha256="0352c50zlyzn8fczrkinayllj9jp978njjl7dazzkzypx0p20va5"; depends=[e1071 maxLik mgcv Rcpp RcppArmadillo]; }; predmixcor = derive2 { name="predmixcor"; version="1.1-1"; sha256="0v99as0dzn0lqnbbzycq9j885rgsa1cy4qgbya37bbjd01b3pykd"; depends=[]; }; predtoolsTS = derive2 { name="predtoolsTS"; version="0.1.1"; sha256="0f9fapw9yjdzj6pwcskbyfwjsvg09ahn20vrv4bgi0dx8am291rl"; depends=[caret forecast Metrics tseries TSPred]; }; prefeR = derive2 { name="prefeR"; version="0.1.1"; sha256="1wgbwbmghsnc2cargwndda0xhcdswvzd0nkjq5g895kl8zcwgpyf"; depends=[entropy mcmc]; }; + preferably = derive2 { name="preferably"; version="0.3.1"; sha256="1p71nby2a63qjqkbd5hp02ws095ywdbrm51bng3by0iwr8j12qvq"; depends=[knitr pkgdown rmarkdown]; }; preference = derive2 { name="preference"; version="1.1.6"; sha256="12gpiwd69ik4r2l67fvad0jmp78w919nhly4drxhfiizl3mw4jdn"; depends=[ggplot2 tidyr]; }; prefmod = derive2 { name="prefmod"; version="0.8-34"; sha256="1fkqp75w3im6b0l4sfs1yr2id8ffp2xbpb6lkgnv833cri787d5x"; depends=[colorspace gnm]; }; + prenoms = derive2 { name="prenoms"; version="0.0.1"; sha256="0r642akcc5fxg736b9d6i53spywk2f7kingni0akgr0gdxc7s6aj"; depends=[tibble]; }; prepdat = derive2 { name="prepdat"; version="1.0.8"; sha256="19rxyss96cmjhzm69f6l1cd3vkw3wskzhxnbmrz4546x00gf9g5v"; depends=[dplyr psych reshape2]; }; - prepplot = derive2 { name="prepplot"; version="0.7"; sha256="1yqiq78iqsk49ky913x4h8f3638blyamrwdhhcmzfgy4n7dnk11x"; depends=[plotrix shape]; }; + prepplot = derive2 { name="prepplot"; version="1.0-1"; sha256="1x6znfhmrsb2zj2cfygsw1fdszcp4xdpaip4b4d5cdl2rykb3bjn"; depends=[plotrix shape]; }; preputils = derive2 { name="preputils"; version="1.0.3"; sha256="1ryrxmcm9vxhblk9r1vaay8ihff6nnd87dzd3375lfcla2fr9jzv"; depends=[data_table]; }; prereg = derive2 { name="prereg"; version="0.5.0"; sha256="0bck13iiaxwpqh0rd45mp1s5d8z62ggg0wa7rmyi8a65aywiypsi"; depends=[rmarkdown]; }; presens = derive2 { name="presens"; version="2.1.0"; sha256="175nr9pqn3m6kh9bcc1gxqmqv05xdsqdw9lx385lmm1g947d2159"; depends=[marelac measurements]; }; presentes = derive2 { name="presentes"; version="0.1.0"; sha256="0d6zhishc7wxcvvglgw44pc6c172qpxb8i4iw3lqbmji7ash5zpx"; depends=[]; }; preseqR = derive2 { name="preseqR"; version="4.0.0"; sha256="1g2rnnmi45649vpy6z45v5i3wxm54s138ajqrzwi3a5r7x3xnhq1"; depends=[polynom]; }; - presize = derive2 { name="presize"; version="0.1.3"; sha256="0sqaivllmiwn8qhii03xv1rnh7ddbvb1psif5ixdyfrc1z2ws0yv"; depends=[ggplot2 kappaSize shiny shinydashboard]; }; + presize = derive2 { name="presize"; version="0.2.3"; sha256="0gwavbi9fbwh454n5yg0rwqy13a8zjhs2yj7jhlmjn1bjjmxp8j4"; depends=[kappaSize shiny]; }; presmTP = derive2 { name="presmTP"; version="1.1.0"; sha256="134p58zzk8i0whscvl5qdfn4niksypyxavq1m15cvw4zzk4dk6fw"; depends=[mgcv survPresmooth]; }; presser = derive2 { name="presser"; version="1.1.0"; sha256="1slkdfh0wq242adp6a60612sjz117bii3pbahn00bfmnpa9g1wya"; depends=[]; }; prettifyAddins = derive2 { name="prettifyAddins"; version="2.0.3"; sha256="0kyvc1z5dykkrb4cnvlscjnm6xzzzsc2lg1bs012zw5x1qg5gp01"; depends=[httr rstudioapi shiny webdriver xml2 XRJulia]; }; - prettyB = derive2 { name="prettyB"; version="0.2.1"; sha256="1qpqr490bpvmj1ybjbh4lhiznqa0n3chn09m7bhn9wfm3ic56s0p"; depends=[]; }; + prettyB = derive2 { name="prettyB"; version="0.2.2"; sha256="1wszcmn5jnk02iyvjld42291m1irfp9m0b3lcdyyp41iq3icm67g"; depends=[]; }; prettyGraphs = derive2 { name="prettyGraphs"; version="2.1.6"; sha256="0yjpwxdy9mkj2k33zvd5klyv4ava46i19yls87n0bvf79y90ikpy"; depends=[]; }; prettyR = derive2 { name="prettyR"; version="2.2-3"; sha256="1rs90cmr5dyry724php90mp41qwzzk1z3gxfwcj1k157qawacyhr"; depends=[]; }; prettycode = derive2 { name="prettycode"; version="1.1.0"; sha256="1ifh9h73szc23p1ii77z0r68n1gghndqqdm07wd7gxsg5pppp1sg"; depends=[crayon]; }; - prettydoc = derive2 { name="prettydoc"; version="0.4.0"; sha256="0c2kxc60z9mz1wk04mdz64j3bfk0s7n6h9fjf82f31vyfmh74ikz"; depends=[rmarkdown]; }; + prettydoc = derive2 { name="prettydoc"; version="0.4.1"; sha256="0aa89jnqhz0l69inrgm1f1riq5bm3ksb8wjl8d4x2f320adsd50h"; depends=[rmarkdown]; }; prettymapr = derive2 { name="prettymapr"; version="0.2.2"; sha256="151jp0l728krmxcyzwjh01mvd1zhqijq0nsgjaqsh0q8n3jmndi0"; depends=[digest httr plyr rjson]; }; prettyunits = derive2 { name="prettyunits"; version="1.1.1"; sha256="1ibmzgknw5896q2i6r59jz2izblxwgb29ivvjzx50pkd1jl9l6cs"; depends=[]; }; prevR = derive2 { name="prevR"; version="3.4.1"; sha256="02qfyc5j7rgvwl7a5pr1l41jmgjxxsrc674xfm08hcydwda5clq1"; depends=[directlabels fields foreign GenKern ggplot2 gstat maptools rgdal sp]; }; prevalence = derive2 { name="prevalence"; version="0.4.0"; sha256="0vnmglxj1p66sgkw4ffc4wgn0w4s281fk2yifx5cn4svwijv30q0"; depends=[coda rjags]; }; prevederer = derive2 { name="prevederer"; version="0.0.1"; sha256="0vkx9nrlgp36xbl95lrb5sb5yivxlcw4yvbs8hgbm31kh0vbz32f"; depends=[httr]; }; prevtoinc = derive2 { name="prevtoinc"; version="0.12.0"; sha256="0ypdxcx9gh87a7ih3cw3yai47rzv41qwh4kpk6007ai8jkjv4n9w"; depends=[dplyr purrr rlang tibble]; }; + prewas = derive2 { name="prewas"; version="1.1.1"; sha256="16dpwpks0sqfq7pdhbpipb8hnm2viic2dnz1g7v86ar51z8db4xk"; depends=[ape future future_apply phangorn vcfR]; }; priceR = derive2 { name="priceR"; version="0.1.5"; sha256="0cky3l0ycyq42dmmipvd8dbnfcblnhnywbb8dvpma96jq76b4czv"; depends=[curl dplyr gsubfn jsonlite lubridate purrr stringi stringr]; }; - pricesensitivitymeter = derive2 { name="pricesensitivitymeter"; version="1.1.1"; sha256="0zlvrzrqndnrwawwzqwpj7c7r86mb80njhv7dcm8l5qygnc4xz3b"; depends=[survey]; }; - prim = derive2 { name="prim"; version="1.0.19"; sha256="1y09w4rad2x2lm6xzwb89cc2y3b274fl3d4l8w22dq3yphnaqsnx"; depends=[misc3d rgl scales]; }; + pricesensitivitymeter = derive2 { name="pricesensitivitymeter"; version="1.2.1"; sha256="1y7qm0kxys4vvlmddsfc0wxxrl5kj1qw8khqkij5310874qj1lrn"; depends=[ggplot2 rlang survey]; }; + prim = derive2 { name="prim"; version="1.0.20"; sha256="0z07ddpz6r3sbi5141n9a0snzcc26rdlxiivfnacs8zavs1sk73x"; depends=[plot3D scales]; }; primePCA = derive2 { name="primePCA"; version="1.0"; sha256="0kpyqv3l58xcyd98a7c7ggsna30j6k62aliidlyxgv2ya0g0dshv"; depends=[MASS Matrix softImpute]; }; primefactr = derive2 { name="primefactr"; version="0.1.1"; sha256="11hi75jwjxrl9p5m8yjwjb20pc9y9vkhi8sjrnisdq2hm53m483w"; depends=[]; }; - primer = derive2 { name="primer"; version="1.1.1"; sha256="1hw7qd0xq3bvzk5ms9q568a3nkj3ws4jnzbmlypy8c5x3ly6pl1d"; depends=[deSolve lattice]; }; + primer = derive2 { name="primer"; version="1.2.0"; sha256="0qs4bzh80a6058v3s25z0w64wqpscgcciqbyqdifixl51z2qadf4"; depends=[deSolve ggplot2 tidyr]; }; primerTree = derive2 { name="primerTree"; version="1.0.5"; sha256="1ymj4y0a8pd0r15bsqilm03b2n0a633ibzzp2h0qkv880xqbikz4"; depends=[ape directlabels foreach ggplot2 gridExtra httr lubridate plyr RCurl reshape2 scales stringr XML]; }; primes = derive2 { name="primes"; version="1.1.0"; sha256="0dy0pir88mblcm8g8mrgxs6fynayqgkcr4g40ghqincwzjd97xlv"; depends=[Rcpp]; }; - princurve = derive2 { name="princurve"; version="2.1.5"; sha256="0ifjwdpvydhn60aya84f5j0ymsq427j89j9a3g8pbigk6qnxj0g5"; depends=[Rcpp]; }; + princurve = derive2 { name="princurve"; version="2.1.6"; sha256="0wzk329bxljkzz57y220lsfckpsn45w348m6dcxh29zbj0ik65h2"; depends=[Rcpp]; }; prinsimp = derive2 { name="prinsimp"; version="0.8-8"; sha256="074a27ml0x0m23hlznv6qz6wvfqkv08qxh3v1sbkl9nxrc7ak4vn"; depends=[]; }; - printr = derive2 { name="printr"; version="0.1"; sha256="13yqqcwfqnbhvcxwrr6j45qhnbxng3qwn2ygkr809gibg9grw471"; depends=[knitr]; }; + printr = derive2 { name="printr"; version="0.1.1"; sha256="09ix71k3djk4j59vqzzzip3zvspydq320lgnj6ymchd8kg0pf3jp"; depends=[knitr]; }; prioGene = derive2 { name="prioGene"; version="1.0.1"; sha256="0k1rlvmfhj1m2zp5zaac8wcwjypd6f4dd8fxxsyrzsafp9aw189l"; depends=[AnnotationDbi org_Hs_eg_db]; }; - prioritizr = derive2 { name="prioritizr"; version="5.0.3"; sha256="1syp4mk1jnsyx9qlygl6pnqwxz3lhq8gk18jk8hpfdqha7as9lcb"; depends=[ape assertthat BH data_table doParallel exactextractr fasterize igraph magrittr Matrix plyr proto raster Rcpp RcppArmadillo rgeos sf sp tibble uuid withr]; }; + prioritizr = derive2 { name="prioritizr"; version="7.0.1"; sha256="1902anqfii32mh12y6777bgv6z50cis8h5zwvzlhk8gbwj8ffs6g"; depends=[ape assertthat BH data_table doParallel exactextractr fasterize igraph magrittr Matrix plyr proto raster Rcpp RcppArmadillo rgeos sf slam sp tibble uuid withr]; }; prioritizrdata = derive2 { name="prioritizrdata"; version="0.2.4"; sha256="0027nbkvp8b2w4cciabiqjdyxhjwh47k7dc36p79mkqfarh04rgv"; depends=[raster sp]; }; prioritylasso = derive2 { name="prioritylasso"; version="0.2.5"; sha256="1myci7akab1fg7p72q1hrchkixs7q5lagdsfpmdbvd13yy4q3h5z"; depends=[glmnet survival]; }; prism = derive2 { name="prism"; version="0.2.0"; sha256="0gl6qmpgfdxn90aw10z4xj4ijcwj9mr0s9ahm28niinr9y89gzxk"; depends=[dplyr ggplot2 httr lubridate magrittr purrr raster readr stringr]; }; prismadiagramR = derive2 { name="prismadiagramR"; version="1.0.0"; sha256="13x3y4rv9b2d013jd6853zkq8rbxq88wlffmdnjs1rca0fnfrn4f"; depends=[DiagrammeR dplyr]; }; - prismatic = derive2 { name="prismatic"; version="0.2.0"; sha256="0j077khvagzs9lxrryi4q1czk1129r93cqf1i1hiz0b3wij2bwsg"; depends=[farver]; }; - prisonbrief = derive2 { name="prisonbrief"; version="0.1.0"; sha256="1fnhg6vqdabdnhvgd19vnkfrdgz8a53snfrx6m6mmdwb6cvavb8m"; depends=[data_table dplyr httr magrittr passport rlang rnaturalearth rnaturalearthdata rvest stringr tibble tidyr xml2]; }; + prismatic = derive2 { name="prismatic"; version="1.0.0"; sha256="13q1qhglpz3z42079sq01bh7gl9652kq90fhb278xhj8yqh529sj"; depends=[farver]; }; + prisonbrief = derive2 { name="prisonbrief"; version="0.1.2"; sha256="06550fnnffpcnv4q2nicrm7p573313lvnj6hkdrf7979ygrsmmfi"; depends=[dplyr httr magrittr passport rnaturalearth rnaturalearthdata rvest sf stringr tibble tidyr xml2]; }; prithulib = derive2 { name="prithulib"; version="1.0.2"; sha256="12ybksrvxzc5gjz8m38cs35b7r3kd8m0zqm2c67pqw38vq82sjxm"; depends=[]; }; - prnsamplr = derive2 { name="prnsamplr"; version="0.1.1"; sha256="1nwssm5h43qakqfk4m54m0ks5n0942p4r1ad0v57lmpx50pnnaaw"; depends=[]; }; + prnsamplr = derive2 { name="prnsamplr"; version="0.2.0"; sha256="18apbfcxmdmcf5qx8ws0hwgkiwkn20k1p4j5l362qwgxl1r3spvb"; depends=[]; }; pro = derive2 { name="pro"; version="0.1.1"; sha256="0f0iliq7bhf313hi0jbwavljic4laxfc0n3gac5y6hzm39gvvgag"; depends=[]; }; proPubBills = derive2 { name="proPubBills"; version="0.1"; sha256="1fpn9x31jjahdyk0f30mbb3ijj4dsghrq9q94r04pjsgr2jw23zx"; depends=[dplyr httr stringr]; }; prob = derive2 { name="prob"; version="1.0-1"; sha256="05qcrsl790hn7p3ap4zj5i1b1sf674wvvrh42lyb7a0nsc09iq9n"; depends=[combinat fAsianOptions]; }; probFDA = derive2 { name="probFDA"; version="1.0.1"; sha256="093k50kyady54rkrz0n9x9z98z5ws36phlj42j25yip7pzhfd6sv"; depends=[MASS]; }; probably = derive2 { name="probably"; version="0.0.6"; sha256="0g7d6mw4nj6lynbpaa4qbnyzpwgw1bwl44b7zxm6x1wal6p679ga"; depends=[dplyr generics rlang tidyselect vctrs yardstick]; }; probemod = derive2 { name="probemod"; version="0.2.1"; sha256="1cgjr03amssc9rng8ky4w3abhhijj0d2byzm118dfdjzrgmnrf9g"; depends=[]; }; - probhat = derive2 { name="probhat"; version="0.3.1"; sha256="0d84hg1qhygpz2d1mc7sbaiqigjxa59b8ajppszrfaqhn19q102q"; depends=[barsurf intoo kubik]; }; + probhat = derive2 { name="probhat"; version="0.4.0"; sha256="02krckplqd1mb70wnxdpw1bjss0w7477cm6zjwarh7qrj8g39bbx"; depends=[barsurf kubik]; }; probout = derive2 { name="probout"; version="1.1.1"; sha256="1hasrvxdig8n3fhzsbmq27050dyanzp1j0qlybnrkb41k9gyljda"; depends=[FNN MASS mclust]; }; proccalibrad = derive2 { name="proccalibrad"; version="0.14"; sha256="0vr55rpcqh9wvy3bklssrimp42x85w3sanjgshfij657v68vmx46"; depends=[]; }; - processR = derive2 { name="processR"; version="0.2.3"; sha256="0zdckw8c4xavrlkaihj3il35whfcam27ra7f4xxhypf9fa9dhzr4"; depends=[diagram dplyr flextable ggplot2 ggrepel interactions lavaan officer predict3d psych purrr rlang rmarkdown rrtable semTools stringr tidyr tidyselect ztable]; }; + proceduralnames = derive2 { name="proceduralnames"; version="0.1.1"; sha256="04ashlba21g1gbvpzw4fda6p618bk1gcnffx9kb4hchwdf8d18h8"; depends=[]; }; + processR = derive2 { name="processR"; version="0.2.6"; sha256="1k6ili4vx2s36l9xdvm7livnjr4r1pcdg5f92ivdivarcb3h907w"; depends=[diagram dplyr flextable ggplot2 ggrepel interactions lavaan officer predict3d psych purrr rlang rmarkdown rrtable semTools stringr tidyr tidyselect ztable]; }; processanimateR = derive2 { name="processanimateR"; version="1.0.3"; sha256="1ywn2hv2wg35i6ww1ckr6gcb709sf1c836ml542g8iiggwk3cvz5"; depends=[bupaR DiagrammeR dplyr htmltools htmlwidgets magrittr processmapR rlang stringr tidyr]; }; processcheckR = derive2 { name="processcheckR"; version="0.1.3"; sha256="14d8148zcnyh9ycqy5nyszrafq3mgck87w80kx2apg52gkdaq18g"; depends=[bupaR dplyr edeaR glue rlang stringr]; }; processmapR = derive2 { name="processmapR"; version="0.3.4"; sha256="0kq940j8frmbal1nqxwv7wshkyv7y3vhax6zr0ngkf18xv73y76z"; depends=[BH bupaR data_table DiagrammeR dplyr edeaR forcats ggplot2 ggthemes glue hms htmltools miniUI plotly purrr RColorBrewer Rcpp rlang scales shiny stringr tidyr]; }; processmonitR = derive2 { name="processmonitR"; version="0.1.0"; sha256="1ckr438yifpsh095j6bb65dq3rdm7cfm8k7qsjmcqwjkww4j74z8"; depends=[bupaR dplyr edeaR ggplot2 magrittr miniUI shiny]; }; - processx = derive2 { name="processx"; version="3.4.5"; sha256="055v2gdrgqsfy8s672wsq79bqr44b4jjmcbqivx4p2d6lqx10s73"; depends=[ps R6]; }; + processx = derive2 { name="processx"; version="3.5.2"; sha256="0azw8sx6nv6pp8m8jrwq01b9na2swrnznn7dwrhn07268w82svzd"; depends=[ps R6]; }; procmaps = derive2 { name="procmaps"; version="0.0.3"; sha256="14vbrsj37hjraskqpagr56r3rax20zszs58yag2gwiib6da1wkpj"; depends=[]; }; prodest = derive2 { name="prodest"; version="1.0.1"; sha256="16nqgd9wrjfxymwbxrnlak54cagbv3fxgbql0w5bxnmyrbbqy509"; depends=[AER DEoptim dplyr Matrix Rsolnp]; }; prodigenr = derive2 { name="prodigenr"; version="0.5.0"; sha256="1h15fwd4rclja0q80y119sah1qbyjlbaqxg360ywq9ig151lxsjq"; depends=[fs git2r rmarkdown rprojroot usethis withr]; }; @@ -13048,9 +13572,9 @@ in with self; { productplots = derive2 { name="productplots"; version="0.1.1"; sha256="1igs6d0qwgsfk0z3vxabgv5kva9w2kpzi535gjfdrbx34j4pf3gx"; depends=[ggplot2 plyr]; }; prof_tree = derive2 { name="prof.tree"; version="0.1.0"; sha256="0mjvxaacrgkzl0f1wn3fpgah4jh720safni66ri0dnriwcxis6rz"; depends=[data_tree]; }; profExtrema = derive2 { name="profExtrema"; version="0.2.1"; sha256="0gdhamnngh1yh3nb7l656qhdr61s0zn6h1hagh22k2fn11z3xhsl"; depends=[DiceKriging KrigInv lhs MASS microbenchmark pGPx quantreg rcdd RColorBrewer]; }; - proffer = derive2 { name="proffer"; version="0.1.0"; sha256="19bri9v1i5ghh9az247k9wmj8dpkbfzdykmzx26jrkzqqsdbilzg"; depends=[cli processx profile RProtoBuf withr]; }; + proffer = derive2 { name="proffer"; version="0.1.1"; sha256="0bc6sq113v7ac7sj7n7xw7wlmhh26krpmj5hraci04jzh998wkvh"; depends=[cli pingr processx profile RProtoBuf withr]; }; profile = derive2 { name="profile"; version="1.0.2"; sha256="0yaxc846bvc29qx0q8jag7llsgiwhzx59nhnrad1v5sqyp3slk5r"; depends=[rlang tibble withr]; }; - profileModel = derive2 { name="profileModel"; version="0.6.0"; sha256="0yq8hy43h62hlz8bbf9ila4a3xcwizi1if27b78xc5y857ncwad8"; depends=[]; }; + profileModel = derive2 { name="profileModel"; version="0.6.1"; sha256="01m5nb8cmq0aq555pxk2a99182si65hhmn68yn9nal2j3zl2bp4i"; depends=[]; }; profileR = derive2 { name="profileR"; version="0.3-5"; sha256="0fgc7585a7194c67irafjnx8g2j6mn3qhcfn76c6dh28clp20qp9"; depends=[ggplot2 lavaan RColorBrewer reshape]; }; profmem = derive2 { name="profmem"; version="0.6.0"; sha256="0gg6ja0ifwn9jj42rw1gnyil55sl9r2y5rjb6yjcvqwd5arajp3l"; depends=[]; }; profr = derive2 { name="profr"; version="0.3.3"; sha256="00bv1q0qn46nz4zjfs0l2yfh3hk71rajlp2rrlwg442z11k79ap9"; depends=[plyr stringr]; }; @@ -13060,20 +13584,22 @@ in with self; { prognosticROC = derive2 { name="prognosticROC"; version="0.7"; sha256="0lscsyll41hpfzihdavygdzqw9xxjp48dmy4i17qsx5h01jl1h4i"; depends=[survival]; }; progress = derive2 { name="progress"; version="1.2.2"; sha256="0dgzb362641aqm8xd88iqa8jmpdm43xs0aba0d5kk6fvapnxi95l"; depends=[crayon hms prettyunits R6]; }; progressr = derive2 { name="progressr"; version="0.7.0"; sha256="0drbb5zrk5yiypbkwrz3yqiwaik77d6w7qgqzv684ycdwc3nar4h"; depends=[digest]; }; - proj4 = derive2 { name="proj4"; version="1.0-10"; sha256="1l6i4735ki6y2qhmg1gmrj93rzrvgpzi23rr3a1akkqp58bnyfaz"; depends=[]; }; - projections = derive2 { name="projections"; version="0.5.2"; sha256="04jblb98smn5z4jfkyqiasvii5shfa4pp69d73l20jkbfkm7bs1m"; depends=[ggplot2 incidence]; }; - projects = derive2 { name="projects"; version="2.1.1"; sha256="04jlvvb8hln9i7b52yqj3f4qcdkzfrhsvjy7j2q7i60wlpdfy1in"; depends=[dplyr fs lubridate magrittr purrr readr rlang rstudioapi sessioninfo stringr tibble vctrs zip]; }; + proj4 = derive2 { name="proj4"; version="1.0-10.1"; sha256="06fsw7j9c50s0md06niyvj6hvsk3fad0y1r1hsqk0jdsbjz7r1b6"; depends=[]; }; + projections = derive2 { name="projections"; version="0.5.4"; sha256="1c7fm2f3fx0905afw3nrbv6vv0a0awpml1rl2kaxnijjgqcxa6dg"; depends=[ggplot2 incidence]; }; + projects = derive2 { name="projects"; version="2.1.3"; sha256="0ljrhswr5sfq051x0aicl9yvwakw9d9drgrmcz9d8qhgw1if0mky"; depends=[dplyr fs lubridate magrittr purrr readr rlang rstudioapi sessioninfo stringr tibble vctrs zip]; }; projmgr = derive2 { name="projmgr"; version="0.1.0"; sha256="1iysxcl6awvp7zbm04zyq4d9659fcz3sy711jnycsxhsk8hsvmc2"; depends=[gh magrittr]; }; projpred = derive2 { name="projpred"; version="2.0.2"; sha256="0nx514mrfh3gv854pr71w5x3zgdnn0kinf5nh7z90q3h7ysry2mg"; depends=[dplyr gamm4 ggplot2 lme4 loo magrittr MASS mgcv optimx Rcpp RcppArmadillo rngtools rstantools tidyverse]; }; promethee123 = derive2 { name="promethee123"; version="0.1.0"; sha256="0s1wkcrvm32dpqg9ahn10kni1xv3ll7akqz4y6yn1d36km81bf21"; depends=[cowplot ggplot2]; }; - promises = derive2 { name="promises"; version="1.1.1"; sha256="002qkhcn3ri6a3w5fizjvdvrjgvqiw8i7rl9jglcnqik5kmwc61p"; depends=[later magrittr R6 Rcpp rlang]; }; + promises = derive2 { name="promises"; version="1.2.0.1"; sha256="1dy4cbqw17awh4q8m7cy3anaj0n9iynabfzflb1g94cyj0bq4fld"; depends=[later magrittr R6 Rcpp rlang]; }; promote = derive2 { name="promote"; version="1.1.1"; sha256="1cdz4xqinyzpbbgkxxd4f86n1h8zj88vp5z6w01cxd5ykyjf5411"; depends=[httr jsonlite stringr]; }; - promotionImpact = derive2 { name="promotionImpact"; version="0.1.4"; sha256="0v0qk9rifhv6xkc0iqhriswnm2lwlpgrk3gqhvd4pkkn2gx4cn3s"; depends=[crayon data_table dplyr ggplot2 ggpubr KernSmooth lmtest prophet Rcpp reshape2 scales stringr strucchange]; }; + promotionImpact = derive2 { name="promotionImpact"; version="0.1.5"; sha256="18iq2r5zirddlfx20alm6qnxf9qv3ii3c9bcm789q0q18d2hyj2q"; depends=[crayon dplyr ggplot2 ggpubr KernSmooth lmtest prophet Rcpp reshape2 scales stringr strucchange]; }; + prompt = derive2 { name="prompt"; version="1.0.1"; sha256="19l2vrm7qcdrf2mliniazf3mc6sz3g9v5sysf9nd01p5harqrk8k"; depends=[cli]; }; + prompter = derive2 { name="prompter"; version="1.0.0"; sha256="1r6g48bpnzgb08rw5hgw30wv9rkm442jv4zmsfsm2njrngh3m876"; depends=[shiny]; }; prop_comb_RR = derive2 { name="prop.comb.RR"; version="1.2"; sha256="10s52fkq7rv6v4gw1yd46f0fbg89ksim0qhgb5jbglzrqh585ny5"; depends=[rootSolve]; }; propOverlap = derive2 { name="propOverlap"; version="1.0"; sha256="0q72z9vbkpll4i3wy3fq06rz97in2cm3jjnvl6p9w8qc44zjlcyl"; depends=[Biobase]; }; propagate = derive2 { name="propagate"; version="1.0-6"; sha256="17jinz1jramlsf87i7vyn2qp82rc1dacljfaxxplrk3crhw3bhs7"; depends=[ff MASS minpack_lm Rcpp tmvtnorm]; }; properties = derive2 { name="properties"; version="0.0-9"; sha256="1zd66cg31yd53rqsc0cwxhlpfn7kvc67qdh3vyj9qib8kwxaw1zl"; depends=[]; }; - prophet = derive2 { name="prophet"; version="0.6.1"; sha256="08b5h4c83143q33slsa7x46bxa98rm5dg251zsb7ixvn2v0zkhk1"; depends=[BH dplyr dygraphs extraDistr ggplot2 Rcpp RcppEigen rlang rstan rstantools scales StanHeaders tidyr xts]; }; + prophet = derive2 { name="prophet"; version="1.0"; sha256="06mryavky9xj54ig4scqjgpx7i56nwhs53g0zqsbs9f6qxja7gll"; depends=[BH dplyr dygraphs extraDistr ggplot2 lubridate Rcpp RcppEigen RcppParallel rlang rstan rstantools scales StanHeaders tidyr xts]; }; proportion = derive2 { name="proportion"; version="2.0.0"; sha256="0a71f6hz6blb7550m9x0di84vp51yjhnn952301rwlrh3axf6dbr"; depends=[ggplot2 TeachingDemos]; }; propr = derive2 { name="propr"; version="4.2.6"; sha256="16ghgzpwz6q9zlaa0pc8wqv0wpz81c75n7zwjyr1lv9y19qwlkfg"; depends=[fastcluster ggplot2 igraph Rcpp]; }; prospectr = derive2 { name="prospectr"; version="0.2.1"; sha256="0yg2ip33548mily51hgpiiasp67pcc3x1ksmbaxcg1mpp48algyz"; depends=[foreach iterators lifecycle mathjaxr Rcpp RcppArmadillo]; }; @@ -13088,21 +13614,23 @@ in with self; { proton = derive2 { name="proton"; version="1.0"; sha256="1mgaw54is8l6ac1rf8s70rj7kv9xgsfdrlvjz01ggfwg7c6pyr3s"; depends=[digest]; }; prototest = derive2 { name="prototest"; version="1.2"; sha256="07g58hq2qdpczqhjsv6dq1bya9rs958r103n91icw5yc19bvyhi2"; depends=[glmnet intervals MASS Rcpp RcppArmadillo]; }; protr = derive2 { name="protr"; version="1.6-2"; sha256="13vgiqkqqq1w2yj5f6i6scag0mr189zmisyvi6fgaw8g9dgxpxan"; depends=[]; }; + protti = derive2 { name="protti"; version="0.1.0"; sha256="1qw5wsg69k3m12d35bng9h80vzqwfh87n5v0rxg8dw8lw303gi38"; depends=[data_table dplyr forcats ggplot2 ggrepel janitor magrittr plotly progress purrr rlang stringr tibble tidyr]; }; proustr = derive2 { name="proustr"; version="0.4.0"; sha256="1qp4v4vb1qh137qn7zi1d2g999z17kq6kpyxy9355mj8c49iy8pn"; depends=[attempt rlang SnowballC stringr tidyr tokenizers]; }; + provDebugR = derive2 { name="provDebugR"; version="1.0.1"; sha256="0ynz5m1gkaj1wks5l71r3iz7npf3mz0r04jsa8zwg670zsv2x7rf"; depends=[httr jsonlite provGraphR provParseR textutils]; }; provExplainR = derive2 { name="provExplainR"; version="1.0"; sha256="0vzab23q2847q1qljgjxfdg3q7s8z1szfbmgg7sksc10zk4450d3"; depends=[diffobj digest dplyr provParseR stringr]; }; provGraphR = derive2 { name="provGraphR"; version="1.0"; sha256="0s2hj8j3rjig37wpjlr2fgw2klwr6a26mxrnk1lq5d9262x6v3aa"; depends=[igraph Matrix provParseR]; }; provParseR = derive2 { name="provParseR"; version="0.3"; sha256="0cmyb6da9l0822xrzni19r1ha6zzya385hk2ym9rmchvb34lax53"; depends=[jsonlite]; }; provSummarizeR = derive2 { name="provSummarizeR"; version="1.4.2"; sha256="1pfnrvgqzpdhrsyh0y75idwj13zgcdj7ql6frpjmc0f5cggv7q1q"; depends=[dplyr provParseR]; }; provTraceR = derive2 { name="provTraceR"; version="1.0"; sha256="19iillyh5zw64mmr6ik4ci1n2p651xqzxa4iq5bwa70imbzyy5ip"; depends=[provParseR]; }; provViz = derive2 { name="provViz"; version="1.0.7"; sha256="0bjq8mywgm2jr0m0458wk6n5al7jr1psvh4g31z4qzlrrkfqgzzg"; depends=[]; }; - provenance = derive2 { name="provenance"; version="2.4"; sha256="14dawdlimzbyjwq13kl0z2nkqfykwrj4kqa6pd8id4zyv7kls885"; depends=[IsoplotR MASS]; }; - proxy = derive2 { name="proxy"; version="0.4-24"; sha256="0z4wdnpv5x135nssxnmkkba7fivd5xgbpaabqjkl2na76vq9pzwc"; depends=[]; }; + provenance = derive2 { name="provenance"; version="3.3"; sha256="0kdpv1gjvgv9nxfsarm1z042xas9d4n2smhrqccs450a2mhb5fxr"; depends=[IsoplotR MASS]; }; + proxy = derive2 { name="proxy"; version="0.4-25"; sha256="1m893djrv6ckadmlx9n5bxfp0ycdh2w63sy6yxfyj1migvc7072f"; depends=[]; }; proxyC = derive2 { name="proxyC"; version="0.1.5"; sha256="159bc42x4shm6n3rh9fc8ziv3ivq0ipmpbasrh279hhn1prc8gg6"; depends=[Matrix Rcpp RcppArmadillo RcppParallel]; }; prozor = derive2 { name="prozor"; version="0.2.11"; sha256="1a2k69fvgi6vxgczk81kh8r2jxc6nirc51w6ac239rqjzb1zyhjm"; depends=[AhoCorasickTrie doParallel dplyr foreach Matrix plyr readr seqinr stringr]; }; - prrd = derive2 { name="prrd"; version="0.0.3"; sha256="1j1hcs5h6h9nz3pdjnw9p2y837706k9yxxjgiv0mgnwyh8pmz425"; depends=[config crayon data_table DBI liteq RSQLite]; }; - prt = derive2 { name="prt"; version="0.1.2"; sha256="010y3hwjlrja24xwkwvigcf8sq9ic7ykq1q9h9nhc5cxn3768w3w"; depends=[assertthat backports cli crayon data_table fansi fst knitr pillar rlang tibble vctrs]; }; + prrd = derive2 { name="prrd"; version="0.0.4"; sha256="1hip4qcy9gqw5s0yv2b07f93xc8gqymqvzfnkcr2jd46l6045818"; depends=[config crayon data_table DBI liteq RSQLite]; }; + prt = derive2 { name="prt"; version="0.1.3"; sha256="1kzcxdfi1p9bjdydv5gpvrd1wgcjmncksdfqnmqhbfnw3dwaas42"; depends=[assertthat backports cli crayon data_table fansi fst knitr pillar rlang tibble vctrs]; }; pryr = derive2 { name="pryr"; version="0.1.4"; sha256="06vj5xl9x37kbd3l5bw7sbgfdnp37spvrjrn976rxi04clqk966k"; depends=[codetools Rcpp stringr]; }; - ps = derive2 { name="ps"; version="1.5.0"; sha256="15pyz94b0z6ibrjp25np5nd4z20whnnr35wsavdgwmsmynba2qbl"; depends=[]; }; + ps = derive2 { name="ps"; version="1.6.0"; sha256="0cdzjqgap108whhsilxllg12m2d05pgksryhrz5bq608bvf7vbc9"; depends=[]; }; psData = derive2 { name="psData"; version="0.2.2"; sha256="013hb6lk9rm2w08m5jbw90ndrcd4wyy2h125jx07c9bs60wh4mp4"; depends=[countrycode DataCombine reshape2 rio xlsx]; }; psSubpathway = derive2 { name="psSubpathway"; version="0.1.1"; sha256="1jzymhh1dy5w735fppqza7ilspsvyidkrdpq2yd3j5xfjckzfh5w"; depends=[GSVA igraph mpmi pheatmap]; }; psbcGroup = derive2 { name="psbcGroup"; version="1.4"; sha256="0l1hmgw4sislryws8hv7r2nglhcs6g9khg0372a70djvhz2l6gfi"; depends=[LearnBayes mvtnorm SuppDists]; }; @@ -13114,7 +13642,7 @@ in with self; { pseudo = derive2 { name="pseudo"; version="1.4.3"; sha256="0ccf3gz2g7g5y4acpj2qnb39hrghhdganizlddg6rx7al869fffs"; depends=[geepack KMsurv]; }; pseudorank = derive2 { name="pseudorank"; version="1.0.1"; sha256="1hjcvl38di1digkqg7nysd7bkljz1v7y54z2rz10fyk9lyp9mpmy"; depends=[doBy Rcpp]; }; pseval = derive2 { name="pseval"; version="1.3.1"; sha256="1jgnv1l9adhwrmkmp6wkzz7jf7w1hyqy47ajr29l21p4g037py45"; depends=[survival]; }; - psfmi = derive2 { name="psfmi"; version="0.5.0"; sha256="06v2wdrsinp721nm8qqhjs2xzqnv22yw0365x1y9gx3mahwjzk6r"; depends=[car cvAUC dplyr ggplot2 lme4 magrittr mice miceadds mitml mitools norm pROC purrr ResourceSelection rms rsample stringr survival tibble tidyr]; }; + psfmi = derive2 { name="psfmi"; version="0.7.1"; sha256="0sjh1mlikrzi6bs7qfsnn3k2n5as22ml5p11jxmv7b3m8sg47s7n"; depends=[car cvAUC dplyr ggplot2 lme4 magrittr mice miceadds mitml mitools norm pROC purrr ResourceSelection rms rsample stringr survival tibble tidyr]; }; psgp = derive2 { name="psgp"; version="0.3-19"; sha256="0yaf69zk4zkpgx5zyksdxb2g4az0ci8v6r23phzcis9fd21y70ds"; depends=[automap doParallel foreach gstat intamap Rcpp RcppArmadillo rgdal sp]; }; psica = derive2 { name="psica"; version="1.0.2"; sha256="1cnrd1p8ikv0hl97jwypw8np1ypa0d8k2mizwd1clkv7inbb264g"; depends=[BayesTree gridBase party partykit randomForest Rdpack rpart]; }; psidR = derive2 { name="psidR"; version="2.0"; sha256="033bi61l9jslz4xhii19i23c10n4irqbzsfm5n54nzznwg85i6d9"; depends=[data_table foreign futile_logger openxlsx RCurl SAScii]; }; @@ -13122,53 +13650,55 @@ in with self; { psoptim = derive2 { name="psoptim"; version="1.0"; sha256="1yziabkd3h05cfl5jy5l8ji2y3w21acvxsq3inxyh0iwyr8qdkkl"; depends=[]; }; pspearman = derive2 { name="pspearman"; version="0.3-0"; sha256="1l5mqga7b5nvm6v9gbl1xsspdqsjqyhhdn4gc4qlz6ld7fqfq6cx"; depends=[]; }; pspline = derive2 { name="pspline"; version="1.0-18"; sha256="1iwsw52miil1v1yl99mzl28qi8gdjr56rlasmh8faqjlpn9z477p"; depends=[]; }; - pspline_inference = derive2 { name="pspline.inference"; version="1.0.2"; sha256="0va16flm7ls2ypkbyamxz9qcdwn3wj62f5s12rci5i3x34hmmxg8"; depends=[assertthat dplyr magrittr mgcv plotrix plyr reshape2 rlang]; }; - psqn = derive2 { name="psqn"; version="0.1.4"; sha256="0pvyd2w99jssqil3rli5gml6paq6nad9jaxh6qxvyggk10g16843"; depends=[Rcpp testthat]; }; - psrwe = derive2 { name="psrwe"; version="1.2"; sha256="0p0462jmr0d992fbmj8f5xsmmwb5nx6x44a4sjq5zfs0rpi31g4l"; depends=[BH cowplot dplyr ggplot2 randomForest Rcpp RcppEigen rstan StanHeaders]; }; + pspline_inference = derive2 { name="pspline.inference"; version="1.0.4"; sha256="1ijz642igm27xg3928w9ffvykai26aar5awbcilrjbkm6fk7yd4w"; depends=[assertthat dplyr magrittr mgcv plotrix plyr reshape2 rlang]; }; + psqn = derive2 { name="psqn"; version="0.2.1"; sha256="0qxskb4bxi8d7lvsn0anhpslrl5g85nbswicfkr3nkmmhwi19d0z"; depends=[Rcpp RcppEigen testthat]; }; + psrwe = derive2 { name="psrwe"; version="1.3"; sha256="09yzr4g3pldsn95n9nmjm4vj5fbv8xl2n8xr8i1ngf766yn65lqj"; depends=[BH cowplot dplyr ggplot2 randomForest Rcpp RcppEigen rstan StanHeaders]; }; pssm = derive2 { name="pssm"; version="1.1"; sha256="0r3d1mzc7bcz238lqq4y518400m2dqm5a1fb9gkfiari1ax099lv"; depends=[abind MASS MHadaptive numDeriv]; }; pssmooth = derive2 { name="pssmooth"; version="1.0.3"; sha256="08syh52gjaf72kq01v6b5dljmwi29nvmjmkkgmjb97zsi15z1wd3"; depends=[chngpt MASS np osDesign]; }; pstest = derive2 { name="pstest"; version="0.1.3.900"; sha256="1rhd4vgqpr9yq0pc3xql3nfgl30v20ldywapp9n967ky2dja4k0z"; depends=[glmx MASS]; }; psy = derive2 { name="psy"; version="1.1"; sha256="027whr670w65pf8f7x0vfk9wmadl6nn2idyi6z971069lf01wdlk"; depends=[]; }; - psych = derive2 { name="psych"; version="2.0.12"; sha256="0k5dw5nb7kx7f21b0z01dry99qcpnk7iaicv7xq9d35wv2hx8wca"; depends=[lattice mnormt nlme]; }; - psychReport = derive2 { name="psychReport"; version="2.0.0"; sha256="0xz401c931js3rk2c346f15im82lgahdkh3f6ls6lnb2s6q33z8p"; depends=[broom cli dplyr ez xtable]; }; - psychTools = derive2 { name="psychTools"; version="2.0.8"; sha256="1g7c8mrwsy0wi0zdqy6l74mvpwlbsigyqnic5fqbx5yfvgd8b645"; depends=[foreign psych]; }; - psychmeta = derive2 { name="psychmeta"; version="2.4.2"; sha256="0qrr4s9anap4xn8hrsz06h3k7x6hxpn8k7h5yic3mkq46qbwlg7x"; depends=[boot curl data_table dplyr ggplot2 metafor progress purrr reshape2 rlang stringi stringr tibble tidyr]; }; - psycho = derive2 { name="psycho"; version="0.5.0"; sha256="0vcabk9j1yf7nz8fh3xg5rr2ia97mfkka23vbv9jya75dhgd84h2"; depends=[bayestestR dplyr effectsize ggplot2 insight parameters performance scales stringr tidyr]; }; + psycModel = derive2 { name="psycModel"; version="0.3.0"; sha256="11258hhj7mgg1japbk10806471s5nrglwg14ps82s90n5nkq5mql"; depends=[dplyr ggplot2 glue lavaan lifecycle lme4 lmerTest parameters performance psych rlang stringr tibble tidyr]; }; + psych = derive2 { name="psych"; version="2.1.3"; sha256="1ibh1ivr280wpmk3qjgm715dk79wx0ikjl9jjjcqs03q6vz4wmdx"; depends=[lattice mnormt nlme]; }; + psychReport = derive2 { name="psychReport"; version="3.0.0"; sha256="1yqf580g8yjldqyng72h91yaqr0h0wjwx7j7zrrs1a8g1ybwdgl8"; depends=[broom cli dplyr ez xtable]; }; + psychTools = derive2 { name="psychTools"; version="2.1.3"; sha256="1i5m0x49nx0nlpgny27kg3c7340xn4a8vvc9rzsbqi1s9mdkzd9w"; depends=[foreign psych]; }; + psychmeta = derive2 { name="psychmeta"; version="2.5.0"; sha256="1c2sbl3f1rni3l6ydmx71yki1rnp1js97fmrd2sfqc8bxh376lrk"; depends=[boot curl data_table dplyr ggplot2 metafor progress purrr reshape2 rlang stringi stringr tibble tidyr]; }; + psycho = derive2 { name="psycho"; version="0.6.1"; sha256="1a3qccr9jwrbwkfbrvckkhhk9qygrc5n4mq80kpzx0zy5bylxi0a"; depends=[bayestestR dplyr effectsize ggplot2 insight parameters scales stringr]; }; psychometric = derive2 { name="psychometric"; version="2.2"; sha256="1b7cx6icixh8k3bv60fqxjjks23qn09vlcimqfv2x3m3nkf8p1s9"; depends=[multilevel nlme]; }; psychomix = derive2 { name="psychomix"; version="1.1-8"; sha256="0lfhfcmrk65gkr1yp317b515vmadbcf0vjcnc76d07yp6yfkz5qw"; depends=[flexmix Formula lattice modeltools psychotools]; }; - psychonetrics = derive2 { name="psychonetrics"; version="0.8"; sha256="1xnjkbg3vqwn32q6qqk7kam34f0w6pghxanxr1qjp2sk7hd15hg2"; depends=[abind combinat corpcor dplyr GA ggplot2 glasso IsingSampler lavaan magrittr Matrix matrixcalc mgcv mvtnorm numDeriv optimx pbapply pbv psych qgraph Rcpp RcppArmadillo roptim tidyr ucminf VCA]; }; + psychonetrics = derive2 { name="psychonetrics"; version="0.9"; sha256="1z6k6j5r08swgqbc9132c4pp42aqyrmvl8185bw94zhyivpgkrar"; depends=[abind combinat corpcor dplyr GA glasso IsingSampler lavaan magrittr Matrix mgcv numDeriv optimx pbapply pbv psych qgraph Rcpp RcppArmadillo roptim tidyr VCA]; }; psychotools = derive2 { name="psychotools"; version="0.6-0"; sha256="1qw5nfw3ww4y283rwqm0v4p2vyan4xjvjhjg8f3j6d7xprx5z8aj"; depends=[]; }; psychotree = derive2 { name="psychotree"; version="0.15-3"; sha256="18lr9dlv5l5fw88n61ch251ddgy1cv6klcj7ba3fg109b86p3bgf"; depends=[Formula partykit psychotools]; }; - psychrolib = derive2 { name="psychrolib"; version="2.5.0"; sha256="154bv16fyyyp5zgcrl2ncyqy15ybjnhqmim75pba11sbww7jdfbw"; depends=[Rcpp]; }; + psychrolib = derive2 { name="psychrolib"; version="2.5.1"; sha256="0l2g3b3s654hjxhmkx5rncrrz5ccbdw396ip5sfz2rm34lfz13ck"; depends=[Rcpp]; }; psymonitor = derive2 { name="psymonitor"; version="0.0.2"; sha256="09288w2bk5jhnbyj516jqn5qb33yqqg5kqbg6ylqk7anlq2yg2sl"; depends=[doParallel foreach magrittr]; }; psyosphere = derive2 { name="psyosphere"; version="0.1.6"; sha256="1hcas3jk2n11lyw1ysmci0sysxf7qg9h2msqqg7q9nqp5gbf90np"; depends=[geosphere ggplot2 Hmisc lubridate plyr rgdal RgoogleMaps sp]; }; psyphy = derive2 { name="psyphy"; version="0.2-2"; sha256="1i9fayfbndn65hk16mlgxrnpw18gwa46rp0iqsj1m1ggq6pscjp1"; depends=[]; }; psyverse = derive2 { name="psyverse"; version="0.1.0"; sha256="0q402z884fwnd812bs44xqbsank89risli13v3njhjc337lj29wx"; depends=[yaml yum]; }; - pterrace = derive2 { name="pterrace"; version="1.0"; sha256="15k5149jqjy20cck5121zsv2mk63amn5b8qgdlacivri9dpxjns1"; depends=[doParallel foreach plotly TDA viridis]; }; ptest = derive2 { name="ptest"; version="1.0-8"; sha256="1d30a23yknf7xgqj8adgr36pnh9dpffl1v5fq682f26fk3ss30qp"; depends=[quantreg]; }; ptinpoly = derive2 { name="ptinpoly"; version="2.8"; sha256="126chp92ha48agx5i819bzdij79zbgj32msijvaid3zhxjx7qy1j"; depends=[misc3d]; }; ptm = derive2 { name="ptm"; version="0.2.2"; sha256="16ldvgndijp55s698053psxdin3lmsqi2ah5zs46g5s8szzhixwk"; depends=[bio3d Biostrings httr igraph jsonlite muscle RCurl seqinr XML xml2]; }; - ptmixed = derive2 { name="ptmixed"; version="1.0.1"; sha256="05k17sczzy7w13v43699bm74nyqz1y9vzylrqbwbdlm8926fjz69"; depends=[aod GLMMadaptive lme4 matrixcalc moments mvtnorm numDeriv tweeDEseq]; }; + ptmixed = derive2 { name="ptmixed"; version="1.0.3"; sha256="03nkbwjybryifv1wk6a923w6pgfb10f9nkda2f2kfxpyi5hwqrzs"; depends=[aod GLMMadaptive lme4 matrixcalc moments mvtnorm numDeriv tweeDEseq]; }; pts2polys = derive2 { name="pts2polys"; version="0.1.3"; sha256="0rmgryv0vds20npvaqvvwrhrx0grfcz9qwdy2w3bx945r0chhw39"; depends=[Rcpp]; }; + ptspotter = derive2 { name="ptspotter"; version="1.0.1"; sha256="1yppjmsxx01n9x0a0bbqsaxjixvrzyjq3112p94igg2xpp6h6cvl"; depends=[beepr log4r pryr stringr this_path]; }; ptsuite = derive2 { name="ptsuite"; version="1.0.0"; sha256="1df273p8v6zvhy2jj6imhjigwj77grx6sxqmg0sidxwqny5d1d9c"; depends=[Rcpp]; }; - ptvapi = derive2 { name="ptvapi"; version="1.1.3"; sha256="1wd6801vv5xpg5nglzwsr06lcsml1kr863bibpz8dp9rds7zgbzk"; depends=[assertthat digest glue httr jsonlite purrr tibble]; }; + ptvapi = derive2 { name="ptvapi"; version="2.0.1"; sha256="01n3am89gcmldcamasjw5666ikpxi68p4mzmkrwy6d1k4shrifbi"; depends=[assertthat digest glue httr jsonlite purrr tibble]; }; ptw = derive2 { name="ptw"; version="1.9-15"; sha256="0ikvzc5vfcs50jl5n49mhk39pcijyfdxd26adgs01h0b50zh1yi2"; depends=[nloptr]; }; ptwikiwords = derive2 { name="ptwikiwords"; version="0.0.3"; sha256="129dad1vy52sf97dqrkwa49vjhv2kvs4pmd5zvq8pxd51hqm6wy9"; depends=[]; }; ptycho = derive2 { name="ptycho"; version="1.1-4"; sha256="1llk3rpk0lf80vwvs23d6dqhgyic3a6sfjc393csj69hh01nrdvc"; depends=[coda plyr reshape2]; }; pubchunks = derive2 { name="pubchunks"; version="0.3.0"; sha256="14jzl0ra0d68s246a9jhfgp1wyy9g7d0rzahvl97crkklld1crvx"; depends=[data_table rcrossref xml2]; }; - pubh = derive2 { name="pubh"; version="1.1.19"; sha256="08zckmic0ysfcf16phz2dcwqj6nnh2aahl5y762xri5fb6pfdxwa"; depends=[car dplyr emmeans Epi epiR epitools ggformula ggplot2 Hmisc huxtable lmtest magrittr moonBook sandwich sjlabelled sjmisc sjPlot survival tibble tidyselect]; }; + pubh = derive2 { name="pubh"; version="1.1.20"; sha256="03xy3cbs4cpn10n8bkcvkfnr0sbk8vaw1dzqf8v4lnmkqznnfwnl"; depends=[car dplyr emmeans Epi epiR epitools ggformula ggplot2 Hmisc huxtable lmtest magrittr moonBook sandwich sjlabelled sjmisc sjPlot survival tibble tidyselect]; }; publipha = derive2 { name="publipha"; version="0.1.1"; sha256="0ssmkz4bbrp5yvqb2da0i6shzm59ydw2sqkmqkid039782sibjch"; depends=[BH loo Rcpp RcppEigen rstan rstantools StanHeaders truncnorm]; }; - pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.16"; sha256="1dcviy347lypbzwwz506d37wy5swla2vjgyqijwc37daic71bnih"; depends=[boot R2HTML RCurl XML]; }; + pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.17"; sha256="0y0qq19lgmgqwlqg6av57n5nvav0gg3n1pya1wp3fmvwdxp205ah"; depends=[boot R2HTML RCurl XML]; }; pubmedR = derive2 { name="pubmedR"; version="0.0.3"; sha256="153br94iqayrvvgzrzx0r3ilcrmnznfdnzk8yaii01s8i1g1wxcd"; depends=[rentrez XML]; }; pubtatordb = derive2 { name="pubtatordb"; version="0.1.4"; sha256="0i5azbf75bwxxzpsr5fc2hh22pbwix00hz9dcdpn5jgp2957f7wx"; depends=[assertthat DBI dplyr R_utils readr RSQLite]; }; pullword = derive2 { name="pullword"; version="0.2"; sha256="14rln0nbd4k2cvf18iwvc56776b9g3m3cs67i7fgzabfrgj8y6db"; depends=[RCurl]; }; - puls = derive2 { name="puls"; version="0.1.1"; sha256="1mx8m3h4wlggjp12dlwbn9qhxlyy9hi70kpkn3v707wnlxqsl9vb"; depends=[cluster dplyr fda fda_usc ggplot2 monoClust purrr rlang tibble tidyr]; }; + puls = derive2 { name="puls"; version="0.1.2"; sha256="0cdgcm4fvakk2mdjmlsnin3d0bf56wrm23p9f4bhh5j1ib68lsh5"; depends=[cluster dplyr fda fda_usc ggplot2 monoClust purrr rlang tibble tidyr]; }; pulsar = derive2 { name="pulsar"; version="0.3.7"; sha256="0gafp8mcp34c1j93sixy3413c32vn0xy8vhxm0b8v2mznbizgjbq"; depends=[Matrix]; }; pulseTD = derive2 { name="pulseTD"; version="0.1.0"; sha256="0sdnswinpnm0vvplrh5gl9gx4p03dx175mqxzg5r52rkzd3rfbsr"; depends=[AnnotationDbi Biobase GenomicAlignments GenomicFeatures ggplot2 Rsamtools S4Vectors SummarizedExperiment]; }; pumilioR = derive2 { name="pumilioR"; version="1.3.1"; sha256="1791r5lkr6hafd2rz9f9nfy5vc03c4833f292khvd2cg43sb0bfc"; depends=[RCurl XML]; }; - puniform = derive2 { name="puniform"; version="0.2.3"; sha256="1y47y6s76pjvp10m8rvdh7y1iidjw96a4wrr920w0js3rn4fi1fz"; depends=[ADGofTest metafor Rcpp RcppArmadillo]; }; + puniform = derive2 { name="puniform"; version="0.2.4"; sha256="0v2977y9cwjx74xk0ig745g09wn7nrcsrg4f6v315sglsm18iaa8"; depends=[ADGofTest metafor Rcpp RcppArmadillo]; }; pureseqtmr = derive2 { name="pureseqtmr"; version="1.2"; sha256="1c2pcci3s949hi8hh0h03mr3m6qw3kvihfglwavx578kjm2qw0xz"; depends=[ggplot2 plyr rappdirs stringr tibble]; }; purge = derive2 { name="purge"; version="0.2.1"; sha256="1faf8mkaxsnj63wnig5rs50hd3j6vzaj0xkdz8kn0j7y2vvshp9p"; depends=[]; }; + purgeR = derive2 { name="purgeR"; version="1.0"; sha256="0shv0g8f5wvalmy793d6wqw5xs0i3vzxika06bkgi5q1a51s5z4w"; depends=[doSNOW foreach progress Rcpp RcppProgress]; }; purging = derive2 { name="purging"; version="1.0.0"; sha256="1b8f87jn6wyh4fp6b1660bd484wcf7xiajdg9dz2594aj1r94qsr"; depends=[MASS]; }; purrr = derive2 { name="purrr"; version="0.3.4"; sha256="1cj091rsjdj2xz16qhynyw72gh5cyhznifcfbrbygndfr4xwksr3"; depends=[magrittr rlang]; }; purrrlyr = derive2 { name="purrrlyr"; version="0.0.7"; sha256="03472xz0q30vjg45xv24zkd9b1w8ggi33vchxrimfnppdiqi3x0m"; depends=[BH dplyr magrittr purrr Rcpp]; }; @@ -13183,15 +13713,16 @@ in with self; { pvsR = derive2 { name="pvsR"; version="0.3"; sha256="1ijmqlcsc8z0aphdd3j37ci8yqsy50wnr2fwn7h8fxbyd12ax2nj"; depends=[httr nnet XML]; }; pwr = derive2 { name="pwr"; version="1.3-0"; sha256="1kfzy73v3z6ipc3kdfkcjrp4b4p5k54nwk796gqi36srm93hgc2v"; depends=[]; }; pwr2 = derive2 { name="pwr2"; version="1.0"; sha256="0zfv7z5yymw310r1sqm8ivsc2pv6dgk2k4b1axmm92gsaj53cn7p"; depends=[]; }; - pwr2ppl = derive2 { name="pwr2ppl"; version="0.1.2"; sha256="1d6rlgmwpnbnxjjpfxrxp0iwaqh1vgp8jpnd7iwf76xw30d3gv0v"; depends=[afex car dplyr ez lavaan MASS MBESS nlme phia tidyr]; }; + pwr2ppl = derive2 { name="pwr2ppl"; version="0.2.0"; sha256="0v0f632b0zl4vbzb2x0294xqvsidvckx8b84qmqx5fbwp8jz8kgx"; depends=[afex car dplyr ez lavaan MASS MBESS nlme phia tidyr]; }; pwrAB = derive2 { name="pwrAB"; version="0.1.0"; sha256="0ifyw40m9gsijw3vm9qb8qk4yydmdixfdpdp45x2hk93j8v61jm1"; depends=[]; }; - pwrFDR = derive2 { name="pwrFDR"; version="2.8.6"; sha256="1k4r9mca35ddfj2dpcrz4k8wfsf15p084iwmk75s18akrin2lzmp"; depends=[]; }; + pwrFDR = derive2 { name="pwrFDR"; version="2.8.7"; sha256="1wv5lafb57907mmr57dh3mz10lv5q720gj0zp48jyjzj78p9kxbi"; depends=[]; }; pwrRasch = derive2 { name="pwrRasch"; version="0.1-2"; sha256="13fr4yfk8aky1vv36pllx673l4lg9q7i661vbyn2zabyizd2rw3b"; depends=[]; }; pwt = derive2 { name="pwt"; version="7.1-1"; sha256="0926viwmwldmzlzbnjfijh00wrhgb0h4h0mlrls71pi5pjfldifa"; depends=[]; }; + pwt10 = derive2 { name="pwt10"; version="10.0-0"; sha256="0zzdd7z9i2dc2br4njfwz7147c907pf25aihh2i3lldkqzcbxkr7"; depends=[]; }; pwt8 = derive2 { name="pwt8"; version="8.1-1"; sha256="1iig0x90ilzh3hdki0h33qgrra8r94rw4bk1x8y7i6c1may8y0v6"; depends=[]; }; pwt9 = derive2 { name="pwt9"; version="9.1-0"; sha256="0m2df89lali9945avcv4gdjpxch9in7vdd042nx0q8nv0alb4ijd"; depends=[]; }; pxR = derive2 { name="pxR"; version="0.42.4"; sha256="1r0ffr5wxf67i1jh67v06vcmifw4hhhasd4aivic94bkvq4sqmn5"; depends=[plyr reshape2 RJSONIO stringr]; }; - pxweb = derive2 { name="pxweb"; version="0.9.1"; sha256="00xp7idhsirmpl970yxnxp6xn128jm5kwsmdwhys32wlbd9kzspc"; depends=[checkmate httr jsonlite]; }; + pxweb = derive2 { name="pxweb"; version="0.10.4"; sha256="18h65kw471hwlznny001x4b9hrwx4nyb6px41fslzd8j4c0mnsfj"; depends=[checkmate httr jsonlite]; }; pycno = derive2 { name="pycno"; version="1.2"; sha256="0ha5css95xb98dq6qk98gnp1al32gy6w5fkz74255vs4hmkwfzw2"; depends=[maptools rgeos sp]; }; pyinit = derive2 { name="pyinit"; version="1.1.1"; sha256="122cgww99icdchr20qyn62q8pv1r817iyrfd6bj7zsq900x9gkxs"; depends=[robustbase]; }; pyramid = derive2 { name="pyramid"; version="1.5"; sha256="0lakn9knmhqvhrp98sc3hhwd4bilpplxbr5j9bv8w6li0qd3d04a"; depends=[]; }; @@ -13201,9 +13732,9 @@ in with self; { qGaussian = derive2 { name="qGaussian"; version="0.1.8"; sha256="02xy35xg4swr1ldnsbywnz2h0ga1pbsivnj0aqmpll7kvwl9qz4c"; depends=[Rcpp robustbase zipfR]; }; qLearn = derive2 { name="qLearn"; version="1.0"; sha256="1ilxmgazm8gjz8c1hhbp4fccibnvnalxrag8b0rn081zsqmhf094"; depends=[]; }; qMRI = derive2 { name="qMRI"; version="1.2"; sha256="10x59g8awxjib5j5mc1yd5wsibk3z6ki6zifxsg8azl0zblxbscf"; depends=[adimpro aws awsMethods oro_nifti stringr]; }; - qad = derive2 { name="qad"; version="0.2.0"; sha256="13yz1aw394n4l4ys5bmmynm821ph4ggxdviv6ky3hq45y494rdvh"; depends=[copula data_table doParallel dplyr foreach ggExtra ggplot2 viridis]; }; + qad = derive2 { name="qad"; version="1.0.0"; sha256="0dpmrm0825vvsvbdlgh21zqgqyl8nmmym8xzyzx1s8jxx4drb95i"; depends=[copula cowplot data_table dplyr ggExtra ggplot2 Rcpp viridis]; }; qap = derive2 { name="qap"; version="0.1-1"; sha256="0d2d1ni1camixyi45lfy00f4pn3p063k7bsi8gj5scp6n15mdgb0"; depends=[]; }; - qape = derive2 { name="qape"; version="1.0"; sha256="15zw02wx9cyn3m9kz64wl0vl9573lml3wr6f1gf949ll2jidhd7c"; depends=[dplyr lme4 Matrix mvtnorm plyr]; }; + qape = derive2 { name="qape"; version="1.1"; sha256="168jcs2p1213k7fdsqvi1hqp9d2y8j2amrbrcxf2cjr5hnck19w9"; depends=[dplyr lme4 Matrix mvtnorm plyr]; }; qat = derive2 { name="qat"; version="0.74"; sha256="04n1jnbkf9dzafjh1n5d4q9p7hvyhnr63nmgl51jqxcf3nan5rlx"; depends=[boot fields gdata gplots moments ncdf4 XML]; }; qbld = derive2 { name="qbld"; version="1.0.1"; sha256="0agx32f2pf1hzs3and40zd7kfkjml7qjbnn0im4dr2v10h1jz6c0"; depends=[knitr mcmcse Rcpp RcppArmadillo RcppDist rmarkdown stableGR]; }; qboxplot = derive2 { name="qboxplot"; version="0.2"; sha256="07f05n7zxgwyxg2r5fz691ra64m218w9v874xfzjx6671c40y1q2"; depends=[]; }; @@ -13211,7 +13742,6 @@ in with self; { qcapower = derive2 { name="qcapower"; version="0.1.0"; sha256="14vszidjvyi8namwv5k0hpgdw1dpns5ilvxfwa920ivdg35709ki"; depends=[devtools ggforce ggplot2]; }; qcc = derive2 { name="qcc"; version="2.7"; sha256="0lc26w7p3d023lfr8v6v75m2vwqg9vi9pdipap19l4vbdq29l4zz"; depends=[MASS]; }; qccrs = derive2 { name="qccrs"; version="0.1.0"; sha256="0lwrmf2809zzdj5f25bb1psh57ibyw90ra41fy2i9vjmgph9wgiq"; depends=[dplyr magrittr purrr tibble]; }; - qcr = derive2 { name="qcr"; version="1.2"; sha256="10770a1rijhl2mhri8vgcdp9k17vbn93z0kiv1fsdd8z48ywbwx4"; depends=[fda_usc MASS mvtnorm qcc qualityTools]; }; qcv = derive2 { name="qcv"; version="1.0"; sha256="0hf02l9c1cpzs02mfn9swfc8l635qsvh6xrhj21g19h5rxaf8jwg"; depends=[]; }; qdap = derive2 { name="qdap"; version="2.4.3"; sha256="1fadzq7afavxfhcd8q6xy3g8d7jwy24zz1da2ig9bd8vrk5zjmnx"; depends=[chron dplyr gender ggplot2 gridExtra igraph NLP openNLP openxlsx plotrix qdapDictionaries qdapRegex qdapTools RColorBrewer RCurl reshape2 scales stringdist tidyr tm venneuler wordcloud XML]; }; qdapDictionaries = derive2 { name="qdapDictionaries"; version="1.0.7"; sha256="0jdx7bxmvc4p41jb4fhaagg5jsbsi7gva870cmyia72li52grhyn"; depends=[]; }; @@ -13219,55 +13749,56 @@ in with self; { qdapTools = derive2 { name="qdapTools"; version="1.3.5"; sha256="09byvv39qmdcavlykpcvk248l2f7sw0pq64ynq2xffmnga3ji24c"; depends=[chron data_table RCurl XML]; }; qdm = derive2 { name="qdm"; version="0.1-0"; sha256="0cfxyy8s5zfb7867f9xv9scq9blq2qnw68x66m7y7nqlrrff5xdr"; depends=[]; }; qfasar = derive2 { name="qfasar"; version="1.2.1"; sha256="14370bmq4qx5j02va13wz52m2lgl4vb992p9587z9v2sxl1v4jjg"; depends=[Rsolnp]; }; - qgam = derive2 { name="qgam"; version="1.3.2"; sha256="0lks2cj0p7irp1i01756v1l7i26d7alax1fbkc20qd6wpz840fi7"; depends=[doParallel mgcv plyr shiny]; }; - qgcomp = derive2 { name="qgcomp"; version="2.6.0"; sha256="0cvjic0xjhling8411s559ph27ss379ywrf70qyj9acskfhy5p8s"; depends=[arm future future_apply generics ggplot2 gridExtra pscl survival tibble]; }; + qgam = derive2 { name="qgam"; version="1.3.3"; sha256="0vx2wf3rqc3j8i0870xrwxndkbgza0nnh7f0yxi8h67lfi7gws4s"; depends=[doParallel mgcv plyr shiny]; }; + qgcomp = derive2 { name="qgcomp"; version="2.7.0"; sha256="043z15h535lhnhi85dwd734p7z6ckfl64wkcb1p3vyq1lpm9y5zh"; depends=[arm future future_apply generics ggplot2 gridExtra pscl survival tibble]; }; qgg = derive2 { name="qgg"; version="1.0.4"; sha256="1xyviy73jl76bpv5izlkgf171qrypgv2wm5mi3s06cb7md8psrkb"; depends=[data_table MASS MCMCpack statmod]; }; - qgraph = derive2 { name="qgraph"; version="1.6.5"; sha256="0pwys9irxvp0ap158drplyypkplbmwqinv0fmlsblk7q875cr592"; depends=[abind BDgraph colorspace corpcor d3Network dplyr fdrtool ggplot2 ggraph glasso gtools Hmisc huge igraph jpeg lavaan Matrix pbapply plyr png psych Rcpp reshape2 tidygraph]; }; + qgraph = derive2 { name="qgraph"; version="1.6.9"; sha256="153bqfmsrghkg7598nfr57r3cxv6dn6ir084njl2sqq5np0sj9di"; depends=[abind colorspace corpcor dplyr fdrtool ggplot2 glasso gtools Hmisc igraph jpeg lavaan Matrix pbapply plyr png psych Rcpp reshape2]; }; qgshiny = derive2 { name="qgshiny"; version="0.1.0"; sha256="0ydhwg4abn8n9pwnjnwf1n1k854zw31z8f2splzdm5j279lsjg3r"; depends=[rmarkdown shiny]; }; qgtools = derive2 { name="qgtools"; version="2.0"; sha256="1gj7vbam53yr2rnxzfxng1p107bjcyjmyj47cxyzaiv19pznkbmw"; depends=[]; }; qha = derive2 { name="qha"; version="0.0.8"; sha256="0sdf6g6884wn73i237xkwszg2mq8xddhvyy225qzpplh5za4pnhl"; depends=[ade4 FactoClass FactoMineR]; }; - qicharts = derive2 { name="qicharts"; version="0.5.5"; sha256="0bl1f64b5n8q9jhzh3rqfyh9613qiy9mhcy2xsn16jyrj4hmj0jd"; depends=[ggplot2 lattice latticeExtra scales]; }; + qicharts = derive2 { name="qicharts"; version="0.5.8"; sha256="1n8jvb9dfb2k60zi9z99sncpwqbbj0h8zngmqq2k795zpa79gf1d"; depends=[ggplot2 lattice latticeExtra scales]; }; qicharts2 = derive2 { name="qicharts2"; version="0.7.1"; sha256="1n6a5v6i3cqh3lib875rlc612a1h21zn39lsnn4kgfxsp2chcz62"; depends=[ggplot2 scales]; }; qif = derive2 { name="qif"; version="1.5"; sha256="12azs7c0anpd71d5663y1jrhirry6cr78wislp4fk64hmsbx7sx4"; depends=[MASS]; }; qiitr = derive2 { name="qiitr"; version="0.1.1"; sha256="0qbqx7g4np2ygyxiqmq5cww1az6ijjx6na6b1mp4ywmyxkjg3k29"; depends=[httr jsonlite purrr rstudioapi]; }; qkerntool = derive2 { name="qkerntool"; version="1.19"; sha256="14inry2hqvkmy0y2y3cl75ri4vri0hirv98gw2rymny69lia5x0s"; depends=[class]; }; qlcMatrix = derive2 { name="qlcMatrix"; version="0.9.7"; sha256="0iqkcvvy8rxlk0s83sjq57dd6fadb18p5z31lzy0gnzv1hsy1x8y"; depends=[docopt Matrix slam sparsesvd]; }; qmap = derive2 { name="qmap"; version="1.0-4"; sha256="02xvq1mw83gln7phacbi3vhkvb100crggbldv13mhwq3wjnmg5k2"; depends=[fitdistrplus]; }; - qmethod = derive2 { name="qmethod"; version="1.5.5"; sha256="1s787big5f1m91n9s7yhxpsfx0161l7pyihlvfp9406k8qxs3jnl"; depends=[digest GPArotation knitr psych xtable]; }; + qmethod = derive2 { name="qmethod"; version="1.8"; sha256="0wv6i48w15pmsd8y0c46r3152w4y7is2xmsy6d9sqys8rbmqk019"; depends=[digest GPArotation knitr psych rjson shiny xtable]; }; qmix = derive2 { name="qmix"; version="0.1.2.0"; sha256="172lhvj7adphxq9gws2i9lysc9bj1wpk60f4hf2h5sisnli15v0x"; depends=[BH Formula Rcpp RcppEigen rstan StanHeaders]; }; qmrparser = derive2 { name="qmrparser"; version="0.1.5"; sha256="0sl9n42j0dx9jqz5vv029ra6dyrg9v7mvdlya8ps3vyd6fjhwh0z"; depends=[]; }; qoma_smuggler = derive2 { name="qoma.smuggler"; version="0.0.1"; sha256="03p9i0kr6i3adpb9lcszcmdr9p26nfy7f8hw2sbydazglaw4hscr"; depends=[lubridate rhli tibble]; }; qpcR = derive2 { name="qpcR"; version="1.4-1"; sha256="1r01q7jv3w59yx1gc0qw91rq7rvdhqsi8y57sqqkmwyqfw2x2vsv"; depends=[MASS Matrix minpack_lm rgl robustbase]; }; qpdf = derive2 { name="qpdf"; version="1.1"; sha256="03lnfncw8qd1fwfyqh1mjvnsjr3b63wxbah0wp5g7z7gba90dwbi"; depends=[askpass curl Rcpp]; }; qpmadr = derive2 { name="qpmadr"; version="0.1.0"; sha256="19q9xwkaklkvxvwmnhn3dm2rzcpwl9swygmzlcqa8008m019film"; depends=[checkmate Rcpp RcppEigen]; }; - qqman = derive2 { name="qqman"; version="0.1.4"; sha256="1v9s9ag1hfb47py87wb2nad4mbsfx35832hdmrh5kxrb2f11zl1s"; depends=[calibrate]; }; - qqplotr = derive2 { name="qqplotr"; version="0.0.4"; sha256="1zy7mlnll0infr2las5c28vi5da04rm869dpccwcws1467mhys3k"; depends=[dplyr ggplot2 knitr MASS robustbase]; }; + qqman = derive2 { name="qqman"; version="0.1.8"; sha256="1a6qp5wv9bvwjchfw8x4jh48hkynlnfr21a8vqgnswldvwbq7njq"; depends=[calibrate]; }; + qqplotr = derive2 { name="qqplotr"; version="0.0.5"; sha256="1ija4ik3bc404yjm5pw4y32krs1gxn6jd05pqmc0ajawydvr4w1r"; depends=[dplyr ggplot2 MASS robustbase]; }; qqr = derive2 { name="qqr"; version="0.0.1"; sha256="1vi4nbm356vahm4hnvy686nysbn4n63p9cjd4i9dm73lhsf9ilmn"; depends=[dplyr rvest stringr tidyverse xml2]; }; qqtest = derive2 { name="qqtest"; version="1.2.0"; sha256="1v0qbbp2dpqflpg7yif7hipwdbz27isfyfwcia1ln7z0nnvkjm8c"; depends=[]; }; qqvases = derive2 { name="qqvases"; version="1.0.0"; sha256="1fli4v1slmnwcmzmmfw84sa4mx3xzv3im1q0plb8811sbsgmwdvl"; depends=[shiny shinythemes]; }; qrLMM = derive2 { name="qrLMM"; version="2.1"; sha256="1viyllsd08dwgd5z930ml1nrcc9saaa18i5sx0bska8b0s7qh414"; depends=[ald lqr mvtnorm psych quantreg]; }; qrNLMM = derive2 { name="qrNLMM"; version="2.0"; sha256="0j69zhs1v4546xrkwra9c2q3kmhf593vi05yjn3b3s5nzh2k0i1x"; depends=[ald lqr mvtnorm psych quantreg]; }; qrage = derive2 { name="qrage"; version="1.0"; sha256="00j74bnkcpp0h8v44jwzj67q9aaw47ajc2fvgr6dckj9rymydinl"; depends=[htmlwidgets]; }; - qrandom = derive2 { name="qrandom"; version="1.2.3"; sha256="0ddk1841viqbyzn292i30a73nswdkhq032lxsphh0j6hp7zsppz4"; depends=[curl jsonlite Rmpfr]; }; - qrcm = derive2 { name="qrcm"; version="2.2"; sha256="04cd78vqqp7pprrfpcza03g4pcffgl42qsax1285fbmxjqhb3yks"; depends=[pch survival]; }; + qrandom = derive2 { name="qrandom"; version="1.2.4"; sha256="0a75pz9bhy6bqxlz02bgkgi83hrq06p9ah7qf8n0pdc2rh3sy1cx"; depends=[curl jsonlite Rmpfr]; }; + qrcm = derive2 { name="qrcm"; version="3.0"; sha256="0y1na936vk5qsir5plzjrbv39jpnq01qplza32z31x6y28is2fz9"; depends=[pch survival]; }; + qrcmNP = derive2 { name="qrcmNP"; version="0.2.0"; sha256="0hxg9w4k4k14fan6hb476wnnnpf4y6xywc2vbjka7cmpl1ydw1p4"; depends=[qrcm survival]; }; qrcode = derive2 { name="qrcode"; version="0.1.1"; sha256="12j0db8vidlgkp0dcjyrw5mhhvazl7v7gpn9wsf2m0qnz1rm4igq"; depends=[R_utils stringr]; }; qrencoder = derive2 { name="qrencoder"; version="0.1.0"; sha256="1lg60lg2fiqdw0m228i8pln2p0kqp9f21qmrx6r6rwxifvwlfhv8"; depends=[base64enc png raster Rcpp]; }; qrjoint = derive2 { name="qrjoint"; version="2.0-3"; sha256="1ymnq8mbvxfdi63f4554mjlix5n864v2nask27pkf3yfxmkr346k"; depends=[coda kernlab Matrix quantreg]; }; qrmdata = derive2 { name="qrmdata"; version="2019-12-03-1"; sha256="0738wiac0dgani0yy61kvpra7zj8qj5ak627i8cjd42zf1yjziz5"; depends=[xts]; }; qrmix = derive2 { name="qrmix"; version="0.9.0"; sha256="1r695d9bmmngvblh9jj0rnjymdaln9w0jywz51wla0bdssssf845"; depends=[MASS quantreg]; }; - qrmtools = derive2 { name="qrmtools"; version="0.0-13"; sha256="1pr0q0wh3xjy3y59nkbpqfkakagbank3b31150rlxy72hkf52g1y"; depends=[ADGofTest lattice Quandl quantmod rugarch xts zoo]; }; + qrmtools = derive2 { name="qrmtools"; version="0.0-14"; sha256="1gjaq6i0xhsivcmivbn4xxsqasbvf95p1w0rzpycxzgcfarxwwx3"; depends=[ADGofTest lattice Quandl quantmod rugarch xts zoo]; }; qrng = derive2 { name="qrng"; version="0.0-8"; sha256="1yagh7llrg208mdmwyq7gy4c7h20hj4s5ikp6nc3q8pl7avmq3jc"; depends=[copula randtoolbox]; }; qrnn = derive2 { name="qrnn"; version="2.0.5"; sha256="0ligz67kbfg5cmvacnb7y0ms1v0c7mbvbcfsxyfiz543ppl3xn1v"; depends=[]; }; - qs = derive2 { name="qs"; version="0.23.4"; sha256="0rvklaawyg4d48x559zj59sk34afhms7ajn90dqdvvrqhj7fbbq6"; depends=[RApiSerialize Rcpp stringfish]; }; + qs = derive2 { name="qs"; version="0.24.1"; sha256="00lfr4ib712yxqqrnavnlr6ckj6aa08cc6fdly02p90a9534qgrn"; depends=[RApiSerialize Rcpp stringfish]; }; qsimulatR = derive2 { name="qsimulatR"; version="1.0"; sha256="0d2al6rnsyj58jhwczn2rx09b007s2yjihpk7i65law7v8dmxiaf"; depends=[]; }; qsort = derive2 { name="qsort"; version="0.2.3"; sha256="1xvp29dijfa2207wyw3z09rmffn61fngfy0f00qjk284n1jnnvrg"; depends=[cowplot ggplot2 gridExtra purrr]; }; qst = derive2 { name="qst"; version="0.1.2"; sha256="0f5c4088y9c5fxyy2dyfkp049lnzvys3zyizazxsa82xwkwsbc8a"; depends=[DBI dbplyr dplyr magrittr RSQLite tibble]; }; - qsub = derive2 { name="qsub"; version="1.1.0"; sha256="0i52bibc782k09f5hp3ic9ll14fsrwjnkdxlb0mhkjvsqm7m5hc5"; depends=[dplyr glue pbapply processx purrr random readr ssh stringr tidyr]; }; + qsub = derive2 { name="qsub"; version="1.1.1"; sha256="0k3k94p9ym65cj554f8hyrfc9xw9i8nsgynnmlim66d5dsq2xswa"; depends=[dplyr glue pbapply processx purrr random readr ssh stringr tidyr]; }; qte = derive2 { name="qte"; version="1.3.0"; sha256="0x65n2qyq1py0nrachxkqd273mywkw433ai5x6ni3ak4ckbp3g66"; depends=[BMisc formula_tools ggplot2 Hmisc knitr msm pbapply quantreg texreg]; }; - qtl = derive2 { name="qtl"; version="1.46-2"; sha256="0rbwcnvyy96gq1dsgpxx03pv423qya26h6ws5y0blj3blfdmj83a"; depends=[]; }; + qtl = derive2 { name="qtl"; version="1.48-1"; sha256="098mgmfj8ndi8yipr9b3f6gbbh78cgp9j7y561nlnhrnyc8bsih9"; depends=[]; }; qtl2 = derive2 { name="qtl2"; version="0.24"; sha256="1558khh0zkwm0rdk87krv9836krvwv5h7ymlz9bsrgcvypyr9186"; depends=[data_table jsonlite Rcpp RcppEigen RSQLite yaml]; }; - qtl2convert = derive2 { name="qtl2convert"; version="0.22-7"; sha256="0i2s4hsab5fvxdjapgwchs1shi658ir06i1dqlqi79q0avdjw4l0"; depends=[qtl qtl2 Rcpp]; }; - qtl2fst = derive2 { name="qtl2fst"; version="0.22-7"; sha256="121rf6bqva7rk6ab3fxlil131fb7p0bffq6yq4vgs50qjlayxyd2"; depends=[fst qtl2]; }; + qtl2convert = derive2 { name="qtl2convert"; version="0.24"; sha256="1anax4plss2nlp0q9l0igzdxhcy4dcrb823vgv71r55wascwl7vx"; depends=[qtl qtl2 Rcpp]; }; + qtl2fst = derive2 { name="qtl2fst"; version="0.24"; sha256="1x7cz8vnvqa7b35bai81bfnkycgp8hxamp5n3qi7law6nw8hl2k3"; depends=[fst qtl2]; }; qtl2pleio = derive2 { name="qtl2pleio"; version="1.4.3"; sha256="0az71vgj1gv7rfz0hnc9rysh49ak2pnkvmih5mwmymr4an84c34k"; depends=[dplyr gemma2 ggplot2 magrittr MASS Rcpp RcppEigen rlang tibble]; }; qtlDesign = derive2 { name="qtlDesign"; version="0.941"; sha256="138yi85i5xiaqrns4v2hw46b731bdgnb301wg2h4cfrxvrw4l0d5"; depends=[]; }; qtlbook = derive2 { name="qtlbook"; version="0.18-8"; sha256="1c849xy2ki7niddajv5wnsm0zdp5381w8zm9lc8rvkdbs2v6rhf4"; depends=[]; }; @@ -13279,42 +13810,43 @@ in with self; { quRan = derive2 { name="quRan"; version="0.1.0"; sha256="108d797l9ggggc5b61pl7f6avzknmnnib2ys5vrg385zfbx9srvw"; depends=[]; }; quad = derive2 { name="quad"; version="1.0"; sha256="0fak12l19f260k0ygh6zimx8dabzsv7a9i2njw8hnfcs3ndffhv5"; depends=[PearsonDS]; }; quadmatrix = derive2 { name="quadmatrix"; version="0.1.0"; sha256="0nngrvvbalmrr6g9bq9f5qrllvwfq5p1b9yhs4zb098s3wga8jms"; depends=[geigen matrixcalc]; }; - quadmesh = derive2 { name="quadmesh"; version="0.4.5"; sha256="0wppxi8g3dq7x4f6dsv7843fhdb43rx45lky4aanqa2im81qa7l8"; depends=[geometry gridBase png raster reproj scales sp viridis]; }; + quadmesh = derive2 { name="quadmesh"; version="0.5.0"; sha256="05scnjprmpmnl7y0206ya9c9bgqgj5sn4naq0c55nk99by8b0bd6"; depends=[geometry gridBase palr png raster reproj scales sp viridis]; }; quadprog = derive2 { name="quadprog"; version="1.5-8"; sha256="1ka9g8zak8sg4y2xbz93dfrldznlk9qpd4pq9z21cdcdn3b8s4i2"; depends=[]; }; quadprogXT = derive2 { name="quadprogXT"; version="0.0.5"; sha256="1yna2kx9pr58vyy6f4mwx4a6avjz84wwhcary88v1k0ihhv9swcz"; depends=[quadprog]; }; quadrupen = derive2 { name="quadrupen"; version="0.2-8"; sha256="1n3wqbdfwkrajhdkng6f8ixdz94znpqdfss872wrk0rz9bhpa03l"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2 scales]; }; qualCI = derive2 { name="qualCI"; version="0.1"; sha256="09mzsy5ryyrn1gz9ahrh95cpfk7g09pmjjy0m82fh4xc7j5w6kpf"; depends=[combinat]; }; qualV = derive2 { name="qualV"; version="0.3-3"; sha256="1yyqk223ydcc0125gsn33a4mcdp8bd76fpn8kj9bfz9g78b8dqmx"; depends=[KernSmooth]; }; - qualityTools = derive2 { name="qualityTools"; version="1.55"; sha256="1c2p78dhwqvzb2k01dvwb41a6hlr2iwpw6fv91036x30rphjzb88"; depends=[MASS Rsolnp]; }; qualmap = derive2 { name="qualmap"; version="0.2.0"; sha256="04kg4vz18zvkd6m37ng70ggi93pynwxi2ahh4n7n78f4rqa1d3nz"; depends=[dplyr glue leaflet purrr rlang sf]; }; qualpalr = derive2 { name="qualpalr"; version="0.4.3"; sha256="1hlssqj2129796d00gnip3ih5b705qasw0hkj25xfz7xak0vdbkm"; depends=[assertthat randtoolbox Rcpp RcppArmadillo RcppParallel]; }; - qualtRics = derive2 { name="qualtRics"; version="3.1.3"; sha256="14dplrrgliix2x6c61l53y1m0jq0k5q7dl72s5mypz916v4r4lhz"; depends=[assertthat dplyr httr jsonlite lifecycle purrr readr rlang sjlabelled stringr tibble]; }; + qualtRics = derive2 { name="qualtRics"; version="3.1.4"; sha256="0p1c19hizqyxzhrkaclglzswcfpj1w3nfkn2q2h737fmhy3hwgnz"; depends=[assertthat dplyr httr jsonlite lifecycle lubridate purrr readr rlang sjlabelled stringr tibble tidyr]; }; qualvar = derive2 { name="qualvar"; version="0.2.0"; sha256="1c7b7lcyq2l46sslk185r6xfh5fb35z9qihrhnh294sw1k52bffa"; depends=[]; }; qualypsoss = derive2 { name="qualypsoss"; version="1.0.0"; sha256="1pvf9b9yw8317wnh1x1jkmwl4cl0r9q7npfw0xzgbs8mfpl9j2ah"; depends=[doParallel foreach MASS mvtnorm]; }; quantable = derive2 { name="quantable"; version="0.3.6"; sha256="15q4phc2j7aihl8f4qzpdwxcvshq2cfzkfcxc8k4qypsxk9a00sb"; depends=[caret dplyr e1071 ggplot2 ggrepel gplots Matrix plyr pROC RColorBrewer readr reshape2 rlang scales stringr tibble tidyr]; }; quantdates = derive2 { name="quantdates"; version="1.0"; sha256="1hyds8rwr1yg740aq4w5fqjrwdf3dl4phf8mj8qsgbb7i0wbbf3q"; depends=[lubridate]; }; - quantdr = derive2 { name="quantdr"; version="1.1.0"; sha256="0ziqms7xdyrkxddniq1h7p2zb1ppi1mxqj78ml8bdpzw5f7yn6ml"; depends=[dr KernSmooth MTS mvtnorm quantreg]; }; - quanteda = derive2 { name="quanteda"; version="2.1.2"; sha256="13rjwgmg5v1dbryrs9ifyy76s5ib6wrbrm2y5af44vhf1h6p9cvy"; depends=[data_table digest extrafont fastmatch ggplot2 ggrepel jsonlite magrittr Matrix network proxyC Rcpp RcppArmadillo RcppParallel sna SnowballC stopwords stringi xml2 yaml]; }; - quanteda_textmodels = derive2 { name="quanteda.textmodels"; version="0.9.2"; sha256="0wf5gvq9lndhl5z70qknqs7svxs60c1na584siv5pvm1a4irz60d"; depends=[ggplot2 glmnet LiblineaR Matrix quanteda Rcpp RcppArmadillo RcppParallel RSpectra SparseM stringi]; }; - quanteda_textplots = derive2 { name="quanteda.textplots"; version="0.90"; sha256="1adbyfnhmxx8p0xi962nha6g4n1kqs0z0zbkhva3c8frw669l5mg"; depends=[data_table extrafont ggplot2 ggrepel igraph Matrix network quanteda quanteda_textmodels quanteda_textstats RColorBrewer Rcpp sna stringi]; }; - quanteda_textstats = derive2 { name="quanteda.textstats"; version="0.91"; sha256="12k7ahzijsxgbqrxzdfqfhj0m6xxrf8j7n04ln01c2m2mvnrm03z"; depends=[data_table digest Matrix nsyllable proxyC quanteda Rcpp RcppArmadillo RcppParallel stringi]; }; + quantdr = derive2 { name="quantdr"; version="1.2.0"; sha256="03dhcb5p9kkyl6qvpxbsjlrnjq0970xcr62j15jyhi878llzqk2n"; depends=[dr KernSmooth MTS mvtnorm quantreg]; }; + quanteda = derive2 { name="quanteda"; version="3.0.0"; sha256="0b1jfkdhpsg5jhjz4p0nf4cmi9p8w40wv3i2f17jf2x1n1y2hjj8"; depends=[fastmatch magrittr Matrix Rcpp RcppArmadillo RcppParallel SnowballC stopwords stringi xml2 yaml]; }; + quanteda_textmodels = derive2 { name="quanteda.textmodels"; version="0.9.4"; sha256="0r2nls93nriw97z0rmmpn2bb8c3jr571hv5slqj68p7ibr06rh1h"; depends=[glmnet LiblineaR Matrix quanteda Rcpp RcppArmadillo RcppParallel RSpectra SparseM stringi]; }; + quanteda_textplots = derive2 { name="quanteda.textplots"; version="0.94"; sha256="1as7mpy3ihja5d9nw7c30w0yhaklpmn41bgw2cvpic2rbp5828fa"; depends=[extrafont ggplot2 ggrepel igraph Matrix network quanteda RColorBrewer Rcpp sna stringi]; }; + quanteda_textstats = derive2 { name="quanteda.textstats"; version="0.94"; sha256="1kih3mgijzjk3az6j13mkgxv6z9pf4wql0qzfg286h0kiwddzl2a"; depends=[Matrix nsyllable proxyC quanteda Rcpp RcppArmadillo RcppParallel stringi]; }; quantification = derive2 { name="quantification"; version="0.2.0"; sha256="116cp88q9cmizxc2a8lsysa1vwyp1y86457fx5qkq5dcm4g721g8"; depends=[car]; }; quantileDA = derive2 { name="quantileDA"; version="1.1"; sha256="0jbklxsy33j7clcw97qq4ijwkrb94v2m11gjcfa38vplfxm9913q"; depends=[]; }; quantilogram = derive2 { name="quantilogram"; version="2.1.1"; sha256="07mvgbk5qhkaihk2dn5c8cfac2xd9hfglh284sg4jkrkq0cfgrl8"; depends=[np quantreg SparseM]; }; - quantities = derive2 { name="quantities"; version="0.1.5"; sha256="1ic44xm7mqj428nd3hqv80nhdzsda87yp9ifxayf46yrxi8p6khf"; depends=[errors Rcpp units]; }; + quantities = derive2 { name="quantities"; version="0.1.6"; sha256="0kz95q8npiir8nadvfnpnnm9z5jg9mqk7b1fp6l0bj8asmjyw1l3"; depends=[errors Rcpp units]; }; quantkriging = derive2 { name="quantkriging"; version="0.1.0"; sha256="0v6kckgzhgsn3158sc06xszdhmk8sfny10j1qyppxsl2hk89n8jf"; depends=[ggplot2 hetGP Matrix reshape2]; }; quantmod = derive2 { name="quantmod"; version="0.4.18"; sha256="0dbcrncv06iqcbkky95dd7l32xq0hhbnkb0kj8wwzym1jf748h5a"; depends=[curl TTR xts zoo]; }; quantoptr = derive2 { name="quantoptr"; version="0.1.3"; sha256="0f9vy9yhya4wpya8n345s6n7a5sb29chdkl5fz6dwa31lp1mvvj3"; depends=[quantreg Rdpack rgenoud stringr]; }; - quantreg = derive2 { name="quantreg"; version="5.75"; sha256="05mb1qmwah5sdgg2z7m36lqkh479phvb1cx4sjnv1ykvmi9alxv5"; depends=[conquer Matrix MatrixModels SparseM]; }; + quantreg = derive2 { name="quantreg"; version="5.85"; sha256="1y8sgl16yby1k7g23y6bdnfllwnxj3iik3fqp96iwm5jd8blb7q4"; depends=[conquer Matrix MatrixModels SparseM]; }; quantreg_nonpar = derive2 { name="quantreg.nonpar"; version="1.0"; sha256="1f9120awnkwsgdiqg98lg7xs5l4y80930869x6k9q76595r5m92k"; depends=[fda mnormt quantreg Rearrangement]; }; quantregForest = derive2 { name="quantregForest"; version="1.3-7"; sha256="0lk7r02i6zpx9sdl2rp0r7fc3a84s8qhg49nh2x7k3vxwa095pjz"; depends=[randomForest RColorBrewer]; }; - quantregGrowth = derive2 { name="quantregGrowth"; version="0.4-3"; sha256="0q2yk51hcn7jnvh14nxa7szfj4pr9grh5rdfwazaziilbwqdmw4f"; depends=[quantreg]; }; + quantregGrowth = derive2 { name="quantregGrowth"; version="1.1-0"; sha256="0qh07z3whlcri4vsb6dsis8ww3qwy4ynlb86bscsbk41nrapy361"; depends=[quantreg]; }; quantregRanger = derive2 { name="quantregRanger"; version="1.0"; sha256="1a9q2prr790bpw6s0y5ni5ppd3vqkjr0v4nqp6ywcj5n3sk69pvx"; depends=[ranger Rcpp]; }; quantspec = derive2 { name="quantspec"; version="1.2-3"; sha256="0ifwq2jmvxhpijz9yd9hffkff6ixcliaqkp9ispp9k1b8icwi8zn"; depends=[abind quantreg Rcpp snowfall zoo]; }; + quarks = derive2 { name="quarks"; version="1.0.6"; sha256="1smn89qkws6lid18dkb3fzjxcf5mb813qcq796nppzhpxrc6sp21"; depends=[rugarch]; }; quarrint = derive2 { name="quarrint"; version="1.0.0"; sha256="13fdmmrgn23xd9vpywmcl7pf729gmcxjfl1wxs30axsbp4h1s6rk"; depends=[neuralnet]; }; - queryparser = derive2 { name="queryparser"; version="0.3.0"; sha256="10p81cr1zzq4bna8x302280v5n8ddm454zybzh8mi2jd3sh4rmbz"; depends=[]; }; + quarto = derive2 { name="quarto"; version="0.1"; sha256="0nn9k2gvvl274wv7ijg1pvzallkjfhp5dx5laxiylg8x1lv2kysf"; depends=[jsonlite rmarkdown yaml]; }; + queryparser = derive2 { name="queryparser"; version="0.3.1"; sha256="1pz66f3wxvvv42l5hib7hbpy14s8a13gn0n57vf6v5zdnz423kdr"; depends=[]; }; questionr = derive2 { name="questionr"; version="0.7.4"; sha256="0p2mshhmm4kk629rm38w6im7xxxphsg9qqrsdd3bwzma4dvxi2l1"; depends=[classInt highr htmltools labelled miniUI rstudioapi shiny styler]; }; - queuecomputer = derive2 { name="queuecomputer"; version="1.0.0"; sha256="004apzgd58agl5w0nn3nba0idhb13hpvcw6aw4h2nmbp2r1bm32y"; depends=[dplyr Rcpp RcppArmadillo tidyr]; }; + queuecomputer = derive2 { name="queuecomputer"; version="1.1.0"; sha256="1lzc0hfva8dpz2q5g0abjc2avyqdffi8g1qi5h6mvx8qn5kx7bmw"; depends=[dplyr Rcpp RcppArmadillo tidyr]; }; queueing = derive2 { name="queueing"; version="0.2.12"; sha256="0hw1ykm24cjpfwh7ac7fjf7mhc59mq8wy2g07aacpy5ibwi8bbsf"; depends=[]; }; quhomology = derive2 { name="quhomology"; version="1.1.1"; sha256="0wiih00zk4682wy1r4nyifh76h5bnvl3f785wjzmrwylnfy951l3"; depends=[MASS numbers]; }; quickPlot = derive2 { name="quickPlot"; version="0.1.6"; sha256="0mffialxdim8f5s0bw9bb7p8dbrfdgq1wqih441x27lnmrvhlsa8"; depends=[backports data_table fpCompare ggplot2 gridBase igraph raster RColorBrewer rgdal rgeos sp]; }; @@ -13330,61 +13862,65 @@ in with self; { quint = derive2 { name="quint"; version="2.1.0"; sha256="0rivacjccr3gdw5w4mzdjyrhw4lpww9665pwyrm845w165h9bi53"; depends=[Formula partykit rpart]; }; quokar = derive2 { name="quokar"; version="0.1.0"; sha256="1qnl3x1aa665xpyb3ac07xrnnjdwbmj645p103144k5is5b8likc"; depends=[ald ALDqr bayesQR dplyr ggplot2 GIGrvg gridExtra knitr magrittr MCMCpack purrr quantreg robustbase tidyr]; }; quotedargs = derive2 { name="quotedargs"; version="0.1.3"; sha256="11cswg9bmddsl1axxcdz11flq46p1zkpv022526f2vgl4qsprwbm"; depends=[]; }; + qut = derive2 { name="qut"; version="2.2"; sha256="1jsp3sv1631ar1sad8fy4l60ar2pbi20g50yz9mhs83427n3l63b"; depends=[flare glmnet lars Matrix]; }; qvcalc = derive2 { name="qvcalc"; version="1.0.2"; sha256="0banzv78kb53ybfbh1hmgx7kxvpbbdxzg4dsn7vrwhmxs72srkch"; depends=[]; }; - qwraps2 = derive2 { name="qwraps2"; version="0.5.0"; sha256="1gsn7k8dxv48wszlvakzanndj402c5nbz3rj1mg0zrin3q2r3jik"; depends=[dplyr ggplot2 knitr Rcpp RcppArmadillo rlang xfun]; }; + qwraps2 = derive2 { name="qwraps2"; version="0.5.2"; sha256="1ars25aa50fn6m4v423pzs4rkplxhpi26qi3aq7f39bgmqpnpy83"; depends=[dplyr ggplot2 knitr Rcpp RcppArmadillo rlang xfun]; }; r_blip = derive2 { name="r.blip"; version="1.1"; sha256="1p33g6i6fq9c27d5ix9nd8prv90i4hrf91x34bldlw8041sjqxm0"; depends=[bnlearn foreign]; }; r_jive = derive2 { name="r.jive"; version="2.4"; sha256="12zjzjjy1dwhr1gxb5029p5l3wjhwaysja4zf6insdnx1fd0ybxd"; depends=[abind gplots]; }; r2d2 = derive2 { name="r2d2"; version="1.0-0"; sha256="1zl0b36kx49ymfks8rm33hh0z460y3cz6189zqaf0kblg3a32nsi"; depends=[KernSmooth MASS sp]; }; r2d3 = derive2 { name="r2d3"; version="0.2.5"; sha256="1wfr5qnywrvps25z9iwn04n6wwvam4340jwpszxbbawby48kjppn"; depends=[htmltools htmlwidgets jsonlite rstudioapi]; }; r2dRue = derive2 { name="r2dRue"; version="1.0.4"; sha256="1apdq7zj5fhs349wm9g6y06nn33x24pg3gdp4z1frd18qlacf8z5"; depends=[matrixStats rgdal sp]; }; r2dictionary = derive2 { name="r2dictionary"; version="0.1"; sha256="0assylz2ih96l4jily76hp524h5xbnc27ln8yjvk9c4q88yr8xfy"; depends=[rstudioapi stringr]; }; - r2dii_analysis = derive2 { name="r2dii.analysis"; version="0.1.3"; sha256="12d0kcgk7yais27aggi5x901yrnvpz0dndswr5akkg8yzny7xq96"; depends=[dplyr glue magrittr r2dii_data rlang tidyr tidyselect zoo]; }; - r2dii_data = derive2 { name="r2dii.data"; version="0.1.6"; sha256="1bsa65wvs1by9h5zmi0v2silpxp497qsqnx4bji1vp1f2g46kj5p"; depends=[]; }; - r2dii_match = derive2 { name="r2dii.match"; version="0.0.7"; sha256="0halwyak97csjpyfwyz1zhjlrqmcq8fi9d9jgxnh2rj4if3qc0s9"; depends=[data_table dplyr glue magrittr purrr r2dii_data rlang stringdist stringi tibble tidyr tidyselect]; }; + r2dii_analysis = derive2 { name="r2dii.analysis"; version="0.1.6"; sha256="03sab7i1yqh6l2ac2s2qnvivx4mrgbpa2qwqx1sjhpc1wkd6bidd"; depends=[dplyr glue magrittr r2dii_data rlang tidyr tidyselect zoo]; }; + r2dii_data = derive2 { name="r2dii.data"; version="0.1.9"; sha256="1amvc24acwanz7z4ahj3bhp2jwqxk4xlsrga1ighgxyyvm0vq0hi"; depends=[]; }; + r2dii_match = derive2 { name="r2dii.match"; version="0.0.9"; sha256="1vxld5svhwj4g0f5gpc1vzb738h1939b9biijh2yr8bg99f7xd1c"; depends=[data_table dplyr glue magrittr purrr r2dii_data rlang stringdist stringi tibble tidyr tidyselect]; }; r2glmm = derive2 { name="r2glmm"; version="0.1.2"; sha256="0iim92blpa59vgz97c2pi05yhbjjmaffdbkbmk5kplfb2vmazgiy"; depends=[afex data_table dplyr ggplot2 gridExtra lmerTest MASS Matrix mgcv pbkrtest]; }; r2mlm = derive2 { name="r2mlm"; version="0.2.0"; sha256="0c6qhjhxfapqx5aiq54msbhda5c8pazpdp2wxdqh8l2gjffvwc4p"; depends=[broomExtra dplyr lme4 magrittr nlme rlang stringr tidyselect]; }; - r2pmml = derive2 { name="r2pmml"; version="0.24.0"; sha256="0fl2kh1b7rvghschadsdp12za0r16xpak29f0w7dh38i5sw5scrk"; depends=[]; }; + r2pmml = derive2 { name="r2pmml"; version="0.26.0"; sha256="15npzyjd5n1zysffhcfp4c0wykk2nhwgs8j2x8fqyn9cv2l8abjk"; depends=[]; }; r2rtf = derive2 { name="r2rtf"; version="0.2.0"; sha256="1bp37kz5alcc5ddf8kdyprn6srn4cwj1xf7lqa6x2a0kc3f7hp71"; depends=[]; }; r2shortcode = derive2 { name="r2shortcode"; version="0.1"; sha256="03djy8m146k31xgvwcbrd1nzwj4wdlvvwzgviv80kskgr6ld9jrj"; depends=[magrittr stringr]; }; - r2sundials = derive2 { name="r2sundials"; version="5.0.0-7"; sha256="11l8z7h0gm71yqns2blrd26p084gcdc4x1xwv0knp8830xqjdsmw"; depends=[Rcpp RcppArmadillo rmumps]; }; + r2sundials = derive2 { name="r2sundials"; version="5.0.0-9"; sha256="1npil0cgk4jl0zwhsh74mm4p3n49cjljs62b8sfp57ysj2bdpvp9"; depends=[Rcpp RcppArmadillo rmumps]; }; r2symbols = derive2 { name="r2symbols"; version="0.1"; sha256="1i4sd015dgkv5i89d0cphp3jmn4jn4wqfazklfglysf85b2cm4iw"; depends=[]; }; - r3PG = derive2 { name="r3PG"; version="0.1.2"; sha256="1awmxs0173x09rrqbn7h4ni068kxzb09jr70zyh0659jnf4zx4dd"; depends=[]; }; - r3dmol = derive2 { name="r3dmol"; version="0.1.0"; sha256="059ya67jrqfcvmp295rynxxsbnyxhlr84cqlvwqzylyzi5hkgmz3"; depends=[htmlwidgets magrittr]; }; + r3PG = derive2 { name="r3PG"; version="0.1.3"; sha256="188vjzjya3qxi2xgzxxvf6ys97yxgdbjivwc54f4as37k2ad7l6p"; depends=[]; }; + r3dmol = derive2 { name="r3dmol"; version="0.1.2"; sha256="06wzszqcy50gks1bss81j1l2a4adi271pnz6310w57g681q1ng19"; depends=[bio3d htmlwidgets magrittr]; }; r4lineups = derive2 { name="r4lineups"; version="0.1.1"; sha256="1p0dnrp21zx1l9lqx01jnq54d5ppb8siibv47i4gsp7c7db9ymxc"; depends=[boot dplyr ggplot2 ggrepel here magick magrittr pROC psych purrr]; }; r4ss = derive2 { name="r4ss"; version="1.36.1"; sha256="03xin7avdbg5ayrcdbw5rx9sh6ingjq2kv3405h01vqf1jhkfsxk"; depends=[coda corpcor gdata gplots gtools kableExtra pso truncnorm]; }; r511 = derive2 { name="r511"; version="0.1.1"; sha256="1njsnjf0746cv6x7fznq4cg556fczqcfawwb869r3w9zv0zj1iy9"; depends=[assertthat dplyr httr tibble xml2]; }; - r5r = derive2 { name="r5r"; version="0.2-1"; sha256="1f6plxidvsj989hmr7gw8crvlmynxbcj1362hidw3zfixx9yjbvf"; depends=[checkmate data_table jdx rJava sf sfheaders]; }; + r5r = derive2 { name="r5r"; version="0.4.0"; sha256="18xab7rgrf9yhx1bnajnyy9iw89jwpwmsfdyypdzgdkyvjc4a15k"; depends=[checkmate curl data_table httr jdx rJava sf sfheaders]; }; r6extended = derive2 { name="r6extended"; version="0.1.2"; sha256="1kq1j5rx57053mslj8jx1s0wjvhis7x3y264zw44q4k2x48q9wxs"; depends=[digest hellno magrittr R6]; }; + r6methods = derive2 { name="r6methods"; version="0.1.0"; sha256="18q1qd7hkxbk0yilqdk17cp7qbl4c71jv10z732539wcmy8svb1v"; depends=[dplyr glue magrittr miniUI purrr rstudioapi shiny stringr]; }; + rADA = derive2 { name="rADA"; version="1.1.9"; sha256="0p47nqm8mki03pq5gzc2r5vx4vixs6hpf7am1fvadgi2bn2jrcl2"; depends=[car dplyr e1071 forestplot ggplot2 gridExtra Hmisc knitr lme4 lmerTest matrixStats openxlsx reshape2 stringr tidyr]; }; rARPACK = derive2 { name="rARPACK"; version="0.11-0"; sha256="12h2y46xcfldhjdmm960swgn9b23zvkj5vg2bi42s9qxwgi02d63"; depends=[RSpectra]; }; rAltmetric = derive2 { name="rAltmetric"; version="0.7.0"; sha256="1vbvjv273vg3pi30vxxa2bivlajfsbqrzflk3payp6ym9myi27mg"; depends=[httr jsonlite rlist]; }; rAmCharts = derive2 { name="rAmCharts"; version="2.1.13"; sha256="1c9gz7jmkh8gfaq8lmcb66kavdldnlc3x1mc1c72di8zxcpgzprc"; depends=[data_table htmltools htmlwidgets knitr pipeR yaml zoo]; }; - rAmCharts4 = derive2 { name="rAmCharts4"; version="1.2.0"; sha256="1jp70sdgr5jsdvha2l4n5msdqkcl2f4y5prd2kddfh1dnr58qni4"; depends=[base64enc htmltools htmlwidgets jsonlite lubridate minpack_lm reactR shiny stringr xml2]; }; + rAmCharts4 = derive2 { name="rAmCharts4"; version="1.3.1"; sha256="05nzr6rcly0m927k0yv143gvh5ir8bvdidjcv6wwiixqs7wh6qf4"; depends=[base64enc htmltools htmlwidgets jsonlite lubridate minpack_lm reactR shiny stringr xml2]; }; rAverage = derive2 { name="rAverage"; version="0.5-8"; sha256="09yap3qv02k5nidi6a4png9xa5yy7cb8hg8s2dq99wnc88s42d26"; depends=[]; }; rAvis = derive2 { name="rAvis"; version="0.1.4"; sha256="0svplnrn8rrr59v04nr1pz7d5r4dr1kdl0bd3kg8c3azxv47mxbp"; depends=[gdata maptools raster RCurl rgdal scales scrapeR sp stringr XML]; }; - rBMF = derive2 { name="rBMF"; version="1.0"; sha256="10dg47yzn696aqx4192nrs5m92z8kkkpk0z1j8pak33c6s2swc51"; depends=[Matrix Rcpp]; }; + rBDAT = derive2 { name="rBDAT"; version="0.9.8"; sha256="0a64y43fadn5i1pgd6z5mvs1v3v0k0x8wrl5yf7xgw50n0zajfi7"; depends=[]; }; + rBMF = derive2 { name="rBMF"; version="1.1"; sha256="16yg1k7vv88q421nk1a70626c7c54bwnb3x7kiyxv2c0ha00f3g8"; depends=[Matrix Rcpp]; }; rBayesianOptimization = derive2 { name="rBayesianOptimization"; version="1.1.0"; sha256="194j445nirvvkz880ax0zw2q1mkiy0khdfjl7bwiwj8knhhvkrhw"; depends=[data_table foreach GPfit magrittr]; }; rBeta2009 = derive2 { name="rBeta2009"; version="1.0"; sha256="0ljzxlndn9ba36lh7s3k4biim2qkh2mw9c0kj22a507qbzw1vgnq"; depends=[]; }; - rBiasCorrection = derive2 { name="rBiasCorrection"; version="0.2.5"; sha256="02jg5fw4glg3hnms7r52s3b9syss5g9ynqz125k5830zaz1q4px3"; depends=[data_table future future_apply ggplot2 ggpubr magrittr nls2 polynom]; }; + rBiasCorrection = derive2 { name="rBiasCorrection"; version="0.2.9"; sha256="04plbjwya821afik8zm5c7q456yncpwyg4yj8wrdlrz0qwxzly5m"; depends=[data_table future future_apply ggplot2 magrittr nls2 polynom]; }; rCAT = derive2 { name="rCAT"; version="0.1.6"; sha256="09jyjjbhpm44wrism3zgg56m01yimlcm3xks8g0cq36lsrclcigp"; depends=[pracma rgdal sp]; }; rCBA = derive2 { name="rCBA"; version="0.4.3"; sha256="10rc08gwsf15f4lci8bbgwpwj8n7k1m23hxk633v68g9amla5nvx"; depends=[arules R_utils rJava TunePareto]; }; rCMA = derive2 { name="rCMA"; version="1.1"; sha256="0dswshg80hbgcib5x9w791sh71q5s4435q8sm9dh170v4ngbax0w"; depends=[]; }; rCRM = derive2 { name="rCRM"; version="0.1.1"; sha256="03p2v1wb7hsvfhdcgawaz8vd2i8kh30dj8mjydlaywxyks6i5caz"; depends=[Rcpp RcppEigen]; }; rChoiceDialogs = derive2 { name="rChoiceDialogs"; version="1.0.6"; sha256="0lp8amdalirpsba44aa3r31xnhmi36qb9qf8f8gdxxbarpgprsbi"; depends=[rJava]; }; rClinicalCodes = derive2 { name="rClinicalCodes"; version="1.0.1"; sha256="1p4p8r2n0k8h9xdzbngb95rshjp3376f5lsx228biqmswhpkhvlf"; depends=[RCurl rjson stringr tm XML]; }; + rD3plot = derive2 { name="rD3plot"; version="1.0.10"; sha256="02brj6g35bw8cc9q00328h9cif1yj7m5cfdml9rxf7giyaqzy7ms"; depends=[igraph]; }; rDEA = derive2 { name="rDEA"; version="1.2-6"; sha256="0045crn7azsy3ggzr28vw5jd4f5aw5nj16cjnjxy2md3skfbc3zw"; depends=[maxLik slam truncnorm truncreg]; }; rDNAse = derive2 { name="rDNAse"; version="1.1-1"; sha256="0cl51q61kwvdsm5f49cjjbzggqam1fnr6gp15cmy6m2yahyxg1lk"; depends=[]; }; rDecode = derive2 { name="rDecode"; version="0.1.0"; sha256="1d0rrhycw9anhvx6czz7axkzhzqprdgi9sqfglmc962zf1x3hmn2"; depends=[]; }; rDotNet = derive2 { name="rDotNet"; version="0.9.1"; sha256="18cd5373pdfi1x958llb4cgjqdi1fb7h7m5nkdwcd4xw9hxhinzd"; depends=[Rcpp testthat]; }; - rEDM = derive2 { name="rEDM"; version="1.7.1"; sha256="0x89sybm9q47iwfncph0s213cypkpvrjivxdl496s9ys22j9fdnh"; depends=[Rcpp RcppThread]; }; + rEDM = derive2 { name="rEDM"; version="1.8.2"; sha256="10agydp7k75hwpk728l2sl8k1bxwnckfhzqysn54lby2f0dc35l6"; depends=[Rcpp RcppThread]; }; rEMM = derive2 { name="rEMM"; version="1.0-11"; sha256="0ynjn10gcmxs8qnh6idb34ppmki91l8sl720x70xkzcqpahy0nic"; depends=[cluster clusterGeneration igraph MASS proxy]; }; - rENA = derive2 { name="rENA"; version="0.2.1.2"; sha256="1achyvdc658la2fhdsjb2jbhcgsv8zgdiis7wkg9nlpchfwlgma9"; depends=[concatenate data_table doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo scales]; }; + rENA = derive2 { name="rENA"; version="0.2.3"; sha256="067xpw1mgb2y15ld4qc6mnf4b9k7nw8am9qz4ms980wyfp4ffjmj"; depends=[concatenate data_table doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo scales]; }; rFDSN = derive2 { name="rFDSN"; version="0.0.0"; sha256="1ffiqpdzy4ipy2aci22zkih4373ifkjkpvsrza8awhyf9fwqwdsl"; depends=[XML]; }; - rFIA = derive2 { name="rFIA"; version="0.3.0"; sha256="126kgwnaf6x2wj732rzxm6v07ysgj5ys5yq4q6xmr0kiqmbcr7lh"; depends=[bit64 data_table dplyr dtplyr ggplot2 lifecycle rlang sf stringr tidyr tidyselect]; }; + rFIA = derive2 { name="rFIA"; version="0.3.1"; sha256="0q88q7vlnjc9waqkdv8b4in91laqhwc1c5fnsmxpyk30b5328vma"; depends=[bit64 data_table dplyr dtplyr ggplot2 lifecycle rlang sf stringr tidyr tidyselect]; }; rFSA = derive2 { name="rFSA"; version="0.9.6"; sha256="1fxd194iq8jnlsnj76mjq2f6db7ln641qwfsf5v63kx3qqhn8x5s"; depends=[hash rPref tibble tidyr]; }; rFerns = derive2 { name="rFerns"; version="4.0.0"; sha256="0a4i918xb3r602lxrgk8gm9jjvxzsm49gxdh1zdza2rrjc4fm36c"; depends=[]; }; - rGEDI = derive2 { name="rGEDI"; version="0.1.9"; sha256="0alr9vnl6qbhy5gsj9chg7igpbr6czzgamqmhjxcxiwb3f7abcz9"; depends=[bit64 curl data_table fs getPass ggplot2 hdf5r jsonlite lazyeval raster RColorBrewer sp]; }; + rGEDI = derive2 { name="rGEDI"; version="0.1.11"; sha256="0fkvy4p82jyfbbfymkfbrdyh13hk6a6wghk2myb64p5nhz8kv7iz"; depends=[bit64 curl data_table fs getPass ggplot2 hdf5r jsonlite lazyeval raster RColorBrewer rgdal rgeos sp]; }; rGammaGamma = derive2 { name="rGammaGamma"; version="1.0.12"; sha256="1051ah6q11qkxj1my4xybbzc8xcqkxfmps8mv2his5cyfllwidbs"; depends=[gsl]; }; - rGoodData = derive2 { name="rGoodData"; version="0.1.1"; sha256="092sgy6y3dkyr32hrir4jvjwh7n6gfvv9z7i631fipg59255g0zy"; depends=[data_table httr jsonlite]; }; rGroovy = derive2 { name="rGroovy"; version="1.3"; sha256="172vm4diygzi4ipmw8bl03k0x3aps0h1vkvwvw539kamy7xb5w98"; depends=[rJava]; }; rHealthDataGov = derive2 { name="rHealthDataGov"; version="1.0.1"; sha256="0lkjprss15yl6n9wgh79r4clip3jndly2ab1lv4iijzxnxay099d"; depends=[bit64 httr jsonlite]; }; rHpcc = derive2 { name="rHpcc"; version="1.0"; sha256="0096z90mmf1j2xpb9034a5ph52m8z6n6xjh3km2vrhw63g3cpwap"; depends=[RCurl XML]; }; @@ -13392,53 +13928,56 @@ in with self; { rIntervalTree = derive2 { name="rIntervalTree"; version="0.1.0"; sha256="0xd6wcra4zvphfgnz1rnnslx96p840zlgms367370xm4hyg6d37x"; depends=[]; }; rIsing = derive2 { name="rIsing"; version="0.1.0"; sha256="1208lwfk9j8gghj8xf6i8v6s18h89ydqsd4jq3r88n403yzbzzck"; depends=[data_table Rcpp RcppEigen]; }; rJPSGCS = derive2 { name="rJPSGCS"; version="0.2-10"; sha256="0a00s10yp22fkvk67dkq43sbphcqla65x9j4qpv076bmdchn7arw"; depends=[chopsticks rJava]; }; - rJava = derive2 { name="rJava"; version="0.9-13"; sha256="1x3mihyqzr61j52rwaqciw43mkjzmhib4s6qf57v6xj40ksqh5jv"; depends=[]; }; + rJava = derive2 { name="rJava"; version="1.0-4"; sha256="1rd9hcwp4464icy22mmis94jb9w5gk90h97j79cy6fixdxwq4ihx"; depends=[]; }; rJython = derive2 { name="rJython"; version="0.0-4"; sha256="13fpcw37cca738v9idqgi3gv9avfkfwfacxj54p2c4wyg46ghnah"; depends=[rJava rjson]; }; rKIN = derive2 { name="rKIN"; version="0.1"; sha256="1j6fdi5h869q4d1hq6ha6qyhisa0zk2qmhjrc4ahl9991d680dyn"; depends=[ggplot2 maptools MASS rgeos sp]; }; + rKOMICS = derive2 { name="rKOMICS"; version="1.0"; sha256="12wvb23ss4vfx15l6im8g2yqnbqv08mkwr2jkb8rdr9g1984lrlw"; depends=[ape circlize ComplexHeatmap dplyr factoextra FactoMineR ggplot2 ggpubr magrittr reshape2 stringr]; }; + rKolada = derive2 { name="rKolada"; version="0.2.0"; sha256="0ikyjzg8xbzyah37dpfwq2slssz956irm4dj8b7zv6x9qxi09gj9"; depends=[dplyr glue httr jsonlite magrittr purrr rlang stringr tibble tidyr urltools]; }; rLDCP = derive2 { name="rLDCP"; version="1.0.2"; sha256="0k7zc1xyqmcl7070hhpqw1d2k1ij6bd4wjym8cw263pds2n7nx21"; depends=[XML]; }; rLFT = derive2 { name="rLFT"; version="1.0.0"; sha256="0r5zyzwb9lzcbwllsblwhmzs4891jvpvzbifv93m75zm6bd5w69p"; depends=[Rcpp sf]; }; rLTP = derive2 { name="rLTP"; version="0.1.4"; sha256="04w432m03xwh0szshsrfw5h7wy43q4lj8z0y07k8w6gsf27cy5bx"; depends=[RCurl]; }; rLakeAnalyzer = derive2 { name="rLakeAnalyzer"; version="1.11.4.1"; sha256="1bwg8mzddsc39km85b41bxp2hwqmb4g5a3010f6yp1qlgcb9rmj1"; depends=[plyr]; }; - rLiDAR = derive2 { name="rLiDAR"; version="0.1.1"; sha256="1w0yi4ygw0l9ydbllqjylp30d401bsf7b6fng6qg3pssbi9v3kln"; depends=[bitops deldir geometry plyr raster rgl sp spatstat]; }; rMEA = derive2 { name="rMEA"; version="1.2.0"; sha256="1h5flmysyxv668si4ycfkkgairy7balk3nm0dsm91gns9xhvjqs0"; depends=[]; }; - rMIDAS = derive2 { name="rMIDAS"; version="0.2.0"; sha256="0pgjbzxai6m7jarr07vfibwd9sk0rlihrj2hycp99vblnfyxcay4"; depends=[data_table mltools reticulate]; }; + rMIDAS = derive2 { name="rMIDAS"; version="0.3.0"; sha256="1vs77dbd5fs8h61s1pz5zgi10g14707fms1bzisfpp2xnj93ybvg"; depends=[data_table mltools reticulate]; }; rMR = derive2 { name="rMR"; version="1.1.0"; sha256="0da1hclfnnlkp9by6zf2p079643p8nimplr9p3ipbjdy739j344z"; depends=[biglm]; }; - rMVP = derive2 { name="rMVP"; version="1.0.4"; sha256="172zcimqh824xapm9gri81c275wp4fn35nibl31api3yldqpp4hn"; depends=[BH bigmemory MASS Rcpp RcppArmadillo RcppEigen RcppProgress]; }; + rMVP = derive2 { name="rMVP"; version="1.0.6"; sha256="0c3bmn7k5hgw8mgplyhwf6dkgvrxd29yj829wy5j9z1p88gq6wrk"; depends=[BH bigmemory MASS Rcpp RcppArmadillo RcppEigen RcppProgress]; }; rMisbeta = derive2 { name="rMisbeta"; version="1.0"; sha256="1h4vilnndl0gnz9z0sgbywp4zy44718zpiqcqigbjbd4lymi0y61"; depends=[ROC]; }; rModeling = derive2 { name="rModeling"; version="0.0.3"; sha256="0xrjxayp59f31wwcqqkzs5my2j2lpbv1f4pp709fmqxz02vbdzhv"; depends=[caret e1071 MASS]; }; - rMorningStar = derive2 { name="rMorningStar"; version="1.0.6"; sha256="1xa68yqzyg3szk1g3hhyvi6bxz83nr18wzk5z75g77ndw3k8jyji"; depends=[dplyr ggplot2 PerformanceAnalytics purrr quantmod readr rvest stringi stringr tidyr xml2 xts]; }; rNMF = derive2 { name="rNMF"; version="0.5.0"; sha256="1nz6h0j5ywdh48m0swmhp34hbkycd7n13rclrxaw85qi9wc42597"; depends=[knitr nnls]; }; rNOMADS = derive2 { name="rNOMADS"; version="2.5.0"; sha256="1symwz83v5lwl651lcyky2v4a13am4hhr1wmvliyvd9zyifkxsnq"; depends=[fields GEOmap MBA RCurl rvest stringr uuid XML]; }; - rNeighborGWAS = derive2 { name="rNeighborGWAS"; version="1.2.2"; sha256="14w75p1x41gfcapn7xnyml8dh0lif14z4y950hw9a41ikbrn62r7"; depends=[gaston Matrix RcppParallel]; }; - rNeighborQTL = derive2 { name="rNeighborQTL"; version="1.1.1"; sha256="0h5xw3pndm964rvd3723s9cmzmxdqlq9kfzlzpd1w9z7izmw9wxg"; depends=[gaston Matrix qtl]; }; + rNeighborGWAS = derive2 { name="rNeighborGWAS"; version="1.2.3"; sha256="08vzpv5ls8gaz7zw36ppbd9xa6qm4vxzp88p1b7z72ysri16pzhd"; depends=[gaston Matrix RcppParallel]; }; + rNeighborQTL = derive2 { name="rNeighborQTL"; version="1.1.2"; sha256="1balbky8jyvyn2v56dvx7b80gpys40pfslqrsv25sywmp0cqy68p"; depends=[gaston Matrix qtl]; }; rODE = derive2 { name="rODE"; version="0.99.6"; sha256="0l518ghfw6283kckqcbh45a35vd73njy05v3dwghhhjdj7v3km8b"; depends=[data_table]; }; rPACI = derive2 { name="rPACI"; version="0.1.2"; sha256="1lk2971590ivw5g65kj99qjn6zdsz9jb7zk0hggf82jmz4rfa175"; depends=[bnlearn]; }; rPAex = derive2 { name="rPAex"; version="1.0.1"; sha256="1v85qy8fg6vf1fqqqawzw4i9sfaihdqzbs0h91hpqbzkc4v7n2bb"; depends=[agricolae raster]; }; rPackedBar = derive2 { name="rPackedBar"; version="0.2.2"; sha256="1nh0kvj4bqkinczj8llcgy63ibsnk9vgsvm0vqg8g526x0vffdma"; depends=[data_table plotly scales shiny]; }; + rPanglaoDB = derive2 { name="rPanglaoDB"; version="0.2.0"; sha256="0bzhghiws3xgh5zz8yi5cd2vp9w3rfv2n1w881cyrhkw4s82qf61"; depends=[Matrix pbapply Seurat XML xml2]; }; rPowerSampleSize = derive2 { name="rPowerSampleSize"; version="1.0.2"; sha256="1insdfvcn1pirsnf7nwfia0kzgsmh2zpghgfj2yc35ld1r9j2hp2"; depends=[mvtnorm ssanv]; }; - rPraat = derive2 { name="rPraat"; version="1.3.1"; sha256="01bz0ja35k8q3ncj9jaqbfh42sf5s73yrb6gsj11lapmfb3g8scf"; depends=[dplyr dygraphs readr stringr tuneR]; }; + rPraat = derive2 { name="rPraat"; version="1.3.2-1"; sha256="19qd3hylp8m0y171xhdd3k84izxyid7k2f9583gkxq8kik3md1v2"; depends=[dplyr dygraphs readr stringr tuneR]; }; rPref = derive2 { name="rPref"; version="1.3"; sha256="0vlzhxhf2x6gw015sjfw2638wv6hckg068rpbzncp7wprn9msa6y"; depends=[dplyr igraph lazyeval Rcpp RcppParallel]; }; rQCC = derive2 { name="rQCC"; version="1.20.7"; sha256="0qbwz5imzgwfwkcvy23ayqvsd8da1nzmhzn8biapgn3gr23w2lx2"; depends=[]; }; rRAP = derive2 { name="rRAP"; version="1.1"; sha256="1nzvs8bjkbjraa33azxf9mrxsxh87qhh3qlldrcs5y4fq4ancyqb"; depends=[lars lassoshooting MASS]; }; - rRofex = derive2 { name="rRofex"; version="2.0.3"; sha256="1hhmnzhfkjyq71mgwj0hbml3cnw4bv3gl1pvnpglcr9qi83kd846"; depends=[dplyr glue httr jsonlite later lifecycle magrittr purrr rlang tibble tidyr websocket]; }; + rRofex = derive2 { name="rRofex"; version="2.0.5"; sha256="1zdll0wig5ng6r92j8jyblvvndaaxardzcicxwzvyh9ncq8m9p66"; depends=[dplyr glue httr jsonlite later lifecycle magrittr purrr rlang tibble tidyr websocket]; }; + rSAFE = derive2 { name="rSAFE"; version="0.1.2"; sha256="0m7xzk76armkd86g643fmpif43dri07vrbq348y8hmys1gnx7ikd"; depends=[DALEX dendextend ggplot2 ggpubr ingredients sets]; }; rSCA = derive2 { name="rSCA"; version="3.1"; sha256="0dhd5325x05cbnw34mlipndw5xnncl9kj7kppb2s5bx2gllcdqqd"; depends=[]; }; rSEA = derive2 { name="rSEA"; version="2.1.1"; sha256="18108ds65ykxygbw1s4i5rb1ngzwymv1x3dhcv1lcwkmqplnaar9"; depends=[ggplot2 hommel]; }; rSFA = derive2 { name="rSFA"; version="1.04"; sha256="0gd6ji1ynbb04rfv8jfdmp7dqnyz8pxcl5636fypd9a81fggl0gs"; depends=[MASS]; }; rSHAPE = derive2 { name="rSHAPE"; version="0.3.2"; sha256="0z6dizsxlkmaymbd24b1m1i8kmndcf21nxxnyfzq6gvdii7bal4h"; depends=[abind DBI doParallel evd foreach RSQLite sn VGAM]; }; rSPARCS = derive2 { name="rSPARCS"; version="0.1.0"; sha256="0k46nhkdn68c7h7bbbdfwl02bldi1m3m62zbp20kh8np9bxy1rnk"; depends=[data_table geosphere plyr raster sp spatialEco tigris]; }; - rSPDE = derive2 { name="rSPDE"; version="0.4.8"; sha256="1m8ys6k3f1jy9iiby36sw0gvz282bhpzgnwa801hv59k411wrh2g"; depends=[Matrix]; }; + rSPDE = derive2 { name="rSPDE"; version="0.6.2"; sha256="0m3h3f5xk46mi87v61zbqyd3091sdcvknsmxjdyad5v6i46qx5xv"; depends=[Matrix]; }; rSQM = derive2 { name="rSQM"; version="1.3.14"; sha256="0m69n2pnfv2085dln6p149a5gw0gif9xk00xmad5s9j68hwjdmym"; depends=[dplyr EcoHydRology ggplot2 gsubfn mise ncdf4 qmap reshape2 stringr yaml zoo]; }; rSymPy = derive2 { name="rSymPy"; version="0.2-1.2"; sha256="0jdl8ss3dbgjqrmmppb0ix1gqk9g28pbh6w5sybil046ic83s13i"; depends=[rJython]; }; - rTRNG = derive2 { name="rTRNG"; version="4.20-1"; sha256="0l0gs65rbl080f1l67xiygz551q5lj0q48nz8m6gsjfq5ias5gn6"; depends=[Rcpp RcppParallel]; }; + rTLS = derive2 { name="rTLS"; version="0.2.3.3"; sha256="1w5cb446nklrn7kfjm22ak5d1j5ln72vjp0jq7f1kq77kkzx63b5"; depends=[alphashape3d boot data_table doSNOW foreach Rcpp RcppArmadillo RcppProgress rgeos rgl sp]; }; + rTRNG = derive2 { name="rTRNG"; version="4.23.1-1"; sha256="0jlkr57afkg6axkdk020rd3nybx1qzwvy1hjgfw8fwvm79x0kpr7"; depends=[Rcpp RcppParallel]; }; rTableICC = derive2 { name="rTableICC"; version="1.0.7"; sha256="1z896675kmm9p5dnmcnsz2205ynf05laqcxvlc9y0g5i0x8rf8v6"; depends=[aster partitions]; }; rTensor = derive2 { name="rTensor"; version="1.4.1"; sha256="1ir2zqs3bvcfi9xwhj1l29qhnh5qvagz9cpw99lb2w73i28x47vz"; depends=[]; }; rTephra = derive2 { name="rTephra"; version="0.1"; sha256="045f2sp2j4hiwa9k1vs6cxr59x1yr34jq1z2crasxflsxbwa3xz8"; depends=[]; }; rTorch = derive2 { name="rTorch"; version="0.4.2"; sha256="03a9vls09mgd77xm1q1h1pqw4q026rdibbjr218706h4iqphrqm7"; depends=[jsonlite reticulate rstudioapi]; }; - rUnemploymentData = derive2 { name="rUnemploymentData"; version="1.1.0"; sha256="0p5hba8iv060szp23s05hvpmwan518ykakm6vqzdcki0inxw0hyv"; depends=[choroplethr rvest stringr]; }; rWBclimate = derive2 { name="rWBclimate"; version="0.1.3"; sha256="0vs56hx7a85pw4jx8nb8bdlr9dbkl4zdhzhqsm0505xc3qz18vxh"; depends=[ggplot2 httr jsonlite plyr reshape2 rgdal sp]; }; rWind = derive2 { name="rWind"; version="1.1.5"; sha256="1fdnbh6yprgbysv6j6i108q9z6b7r17kb2hg4i4sa97c2jlcb39s"; depends=[gdistance lubridate Matrix raster]; }; rWishart = derive2 { name="rWishart"; version="0.1.2"; sha256="0wzijc454mrvmggb7a5jqwjbmk0kzr4bmy0iwniz5cn343pr1rri"; depends=[lazyeval MASS Matrix]; }; rYoutheria = derive2 { name="rYoutheria"; version="1.0.3"; sha256="1r63ggy4knwzxnpjkmsn7zwmwfaznm8mmxl7r9ph10wz4sblgygl"; depends=[plyr RCurl reshape2 RJSONIO]; }; + ra4bayesmeta = derive2 { name="ra4bayesmeta"; version="1.0-7"; sha256="07fcjqw8w787pcfzjxxwq6160433ms6xk9qrvvm8ybxd7n0f5i44"; depends=[bayesmeta]; }; rabhit = derive2 { name="rabhit"; version="0.1.5"; sha256="0dqzcv241g2b2slygq87w4qkdxalr58zs61k7485b8745xansxmv"; depends=[alakazam cowplot data_table dendextend dplyr fastmatch ggdendro ggplot2 gridExtra gtable gtools htmlwidgets plotly plyr RColorBrewer reshape2 rlang splitstackshape stringi tidyr tigger]; }; rabi = derive2 { name="rabi"; version="1.0.2"; sha256="0jndx1gvsnsv1xrx3ismgvjp7d4kj3436zcawvw32c5klvxx0y4j"; depends=[numbers polynom shiny stringdist]; }; raceland = derive2 { name="raceland"; version="1.1.1"; sha256="1sb56id7h1nm34a7kf6abfxwh4kmnnzc51x23cijq6fd3jm4ggnr"; depends=[comat fasterize plotwidgets raster Rcpp RcppArmadillo rgdal sf]; }; @@ -13450,48 +13989,47 @@ in with self; { radiant_basics = derive2 { name="radiant.basics"; version="1.3.4"; sha256="0y4s3zhphkaxlgwmiz96nwxq1s87i2i1mnph062xghlm7x92bwc3"; depends=[dplyr ggplot2 lubridate magrittr patchwork polycor psych r_import radiant_data scales shiny tidyr]; }; radiant_data = derive2 { name="radiant.data"; version="1.3.12"; sha256="08bqqrfvpgyf613ikihwfnzb23l23f5nfs7zynnxbjxc1zfhbpny"; depends=[base64enc broom car curl dplyr DT ggplot2 glue jsonlite knitr lubridate magrittr markdown MASS patchwork plotly psych r_import randomizr readr readxl rlang rmarkdown rstudioapi scales shiny shinyAce shinyFiles stringi tibble tidyr writexl]; }; radiant_design = derive2 { name="radiant.design"; version="1.3.5"; sha256="1514s21jybyvpi2sx06xsxfrzgg07x7xxhwsazc61v3w1mllj2xw"; depends=[AlgDesign dplyr magrittr mvtnorm polycor pwr r_import radiant_data randomizr shiny]; }; - radiant_model = derive2 { name="radiant.model"; version="1.3.14"; sha256="1z44p1bd1s7pfyx63sfy4akmcbs9wxkq297hpixpy4yy0ba3llpz"; depends=[broom car data_tree DiagrammeR dplyr e1071 ggplot2 ggrepel lubridate magrittr NeuralNetTools nnet patchwork pdp psych r_import radiant_basics radiant_data ranger rlang rpart sandwich shiny stringr tidyr xgboost yaml]; }; + radiant_model = derive2 { name="radiant.model"; version="1.3.15"; sha256="1fn2gzgk4ylffwdfd13jqh2l80vaqjry924lwg5x901yhvzpy01f"; depends=[broom car data_tree DiagrammeR dplyr e1071 ggplot2 ggrepel lubridate magrittr NeuralNetTools nnet patchwork pdp psych r_import radiant_basics radiant_data ranger rlang rpart sandwich shiny stringr tidyr xgboost yaml]; }; radiant_multivariate = derive2 { name="radiant.multivariate"; version="1.3.5"; sha256="1khgy3zj0q155dyky1bd2wfdj6r8jgw8aa6a2nj0rbnwa5zam913"; depends=[car clustMixType dplyr ggplot2 ggrepel gower GPArotation lubridate magrittr MASS patchwork polycor psych r_import radiant_data radiant_model rlang scales shiny]; }; - radiomics = derive2 { name="radiomics"; version="0.1.3"; sha256="1ra94yaqw88slznhyv70kbfricxi44m4pnx1zh4ijghm491rphr5"; depends=[Rcpp reshape2 spatstat]; }; radir = derive2 { name="radir"; version="1.0.4"; sha256="12a99ig3n6kp5wa5rjp2w1nal4qqjs6vq05d3lrqcyl3bind6lqb"; depends=[hermite]; }; radix = derive2 { name="radix"; version="0.6"; sha256="0290n0yax8649srdjbq4439h0d9f6jsmxayyhp86igcnszcxilnb"; depends=[base64enc bookdown digest downloader htmltools jsonlite knitr lubridate mime png progress rmarkdown rprojroot rstudioapi stringr whisker xfun xml2 yaml]; }; radlibs = derive2 { name="radlibs"; version="0.2.0"; sha256="1xl7pacqgiv68ay7mkr6bkx3rqqr7z8b9yh42n4zm7ybqfxbx6dr"; depends=[data_table lexicon stringr]; }; radmixture = derive2 { name="radmixture"; version="0.0.1"; sha256="0rs60xjd43lg5c9972qhpg6bsqfg2578qvrz7gz3bdip10jb1ryj"; depends=[magrittr MCMCpack plyr quadprog]; }; - radous = derive2 { name="radous"; version="0.1.0"; sha256="0vny1dw67xqp9wsrmqr4l7nphjf3jnzrhwx5qwjb16bnsfzcnjfd"; depends=[glue httr janitor readr]; }; - radsafer = derive2 { name="radsafer"; version="2.2.3"; sha256="0cb5s6wgx5yp8500vn42b5ryv8vwax7pq9x1wipn6p6lkn4c573z"; depends=[dplyr ggplot2 ggthemes magrittr RadData readr rlang scatterplot3d stringr]; }; + radous = derive2 { name="radous"; version="0.1.2"; sha256="0m9k921p0ax9mpgmp7k84q3k8d2ha077h9l1fkgk938rgmb19i5s"; depends=[checkmate curl glue httr readr]; }; + radsafer = derive2 { name="radsafer"; version="2.2.5"; sha256="08088mifqlhkg8qrly2v1idvzl96fg2zymn812yqwppxjgcymzbz"; depends=[dplyr ggplot2 ggthemes magrittr qpdf RadData readr rlang scatterplot3d stringr utf8]; }; rafalib = derive2 { name="rafalib"; version="1.0.0"; sha256="1dmxjl66bfdgrybhwyaa8d4i460liqcdw8b29a6w7shgksh29m0k"; depends=[RColorBrewer]; }; - ragg = derive2 { name="ragg"; version="0.4.0"; sha256="01513bxcf77qiivzjg13z7j2yigcrl4w0hb6ss8dmhm3fjbd631q"; depends=[systemfonts textshaping]; }; + ragg = derive2 { name="ragg"; version="1.1.2"; sha256="0q28bwjdxpxm1wlkd8sxdf1m1q8wp4mmzp83d3m09nyy90ydkd8w"; depends=[systemfonts textshaping]; }; rags2ridges = derive2 { name="rags2ridges"; version="2.2.4"; sha256="1xdk39jk357g6i2aav4c236xpcm7i7836y0zfm68gyw00jrbl6hq"; depends=[expm fdrtool ggplot2 graph gRbase Hmisc igraph RBGL Rcpp RcppArmadillo reshape RSpectra sfsmisc snowfall]; }; ragt2ridges = derive2 { name="ragt2ridges"; version="0.3.4"; sha256="17i3z0p3a4dqa0bch5l1r830w5nlxhdg71y82jipp6cfiwli588z"; depends=[abind Biobase CGHbase expm fdrtool igraph MASS Matrix mvtnorm rags2ridges Rcpp RcppArmadillo]; }; ragtop = derive2 { name="ragtop"; version="1.1.1"; sha256="0vgc2q71g8ysccq19kbk9a4swxgd5qj91xm4bshfgdg5chxqnb50"; depends=[futile_logger limSolve]; }; rai = derive2 { name="rai"; version="1.0.0"; sha256="0qimfzchbrarkwmv3mxxbdgvqzk16sc8m1h140zm0cnfgr2pvi5p"; depends=[dplyr ggplot2 readr rlang]; }; rainbow = derive2 { name="rainbow"; version="3.6"; sha256="11vfcck17d2xjc049ci5i8l1nqv345anmd110gdz7654i1pj9lb3"; depends=[cluster colorspace hdrcde ks MASS pcaPP]; }; raincin = derive2 { name="raincin"; version="1.0.3"; sha256="1wi430vsp5c0vm9p1srrs0nrbdb8x31qh7zph4v3fy7j0z226cwh"; depends=[lme4 popdemo]; }; - raincpc = derive2 { name="raincpc"; version="1.1.0"; sha256="1f59z989q0ipwnkxwiwqj9m6v37qli6c5f1ks5kml5ndpmjxf1h1"; depends=[raster]; }; - rainette = derive2 { name="rainette"; version="0.1.1"; sha256="1s9xwc5mw5m3ax3wyjnwjgh18glbhr1wzsp867fpk7s9bdzfxl9s"; depends=[dendextend dplyr formatR future future_apply ggplot2 ggwordcloud gridExtra highr miniUI progressr purrr quanteda RColorBrewer Rcpp rlang RSpectra shiny stringr tidyr]; }; rainfarmr = derive2 { name="rainfarmr"; version="0.1"; sha256="1gasnmyjnis6vv0krx6299ck2a6v9v1fgqajzqdpjaz2fsxn245i"; depends=[]; }; rakeR = derive2 { name="rakeR"; version="0.2.1"; sha256="0cd89q6k0y9z1qk9k06iw56lhj4c52ckr0g4qv6q95lkyrbi3qg8"; depends=[ipfp wrswoR]; }; - ralger = derive2 { name="ralger"; version="2.2.0"; sha256="1gcs1yqdk0814q48sfjnhm409n86iliz4fkjg70d57a79gqrldfc"; depends=[crayon curl dplyr magrittr purrr robotstxt rvest stringr testthat tidyr xml2]; }; + ralger = derive2 { name="ralger"; version="2.2.4"; sha256="1j0np7h051dglva3dj9b64fagr99hvpsza1q2fnc7g3x1ki7mgni"; depends=[crayon curl dplyr robotstxt rvest stringi stringr tidyr xml2]; }; ramchoice = derive2 { name="ramchoice"; version="1.1"; sha256="1im9r95109919hfmici6avdqxh3a375wmg2lfy75z1gjivvcygbr"; depends=[MASS]; }; - ramcmc = derive2 { name="ramcmc"; version="0.1.0-1.1"; sha256="15bgjr2m4zx95bkwak1v87rjzcybsaa9hr21bjrpdn2zxw3jp3pk"; depends=[Rcpp RcppArmadillo]; }; - rameritrade = derive2 { name="rameritrade"; version="0.1.4"; sha256="1znm0cifc8rp696l45zgqd8qwkam0br2j6fqnr642ciciyrl8lk7"; depends=[dplyr httr jsonlite lubridate magrittr urltools]; }; + ramcmc = derive2 { name="ramcmc"; version="0.1.1"; sha256="0rz28gwfrl7gqzray7xn6fr94sij8lckf44cyn27wdmwcjvr0gvf"; depends=[Rcpp RcppArmadillo]; }; + rameritrade = derive2 { name="rameritrade"; version="0.1.5"; sha256="1yp655zy1zn86x49adg3wwq8jvflm64a8gyaf9f3w75ihjy470bf"; depends=[dplyr httr jsonlite lubridate magrittr urltools]; }; ramify = derive2 { name="ramify"; version="0.3.3"; sha256="0cxmkxhshg0vrcxai2gbm4iih04f44liv5nh5jiq85hjz8qbhdi2"; depends=[]; }; ramlegacy = derive2 { name="ramlegacy"; version="0.2.0"; sha256="0q8qks8qapar12dzlkxlbvw4rj7qxmfw64cph834ckm4z7sis873"; depends=[cli crayon httr rappdirs readxl]; }; ramps = derive2 { name="ramps"; version="0.6.16"; sha256="1az2wp1jrf4yszcgq9l18g4b9bi2hkg0q6nymdaksbn20jkhwg32"; depends=[coda fields maps Matrix nlme]; }; ramsvm = derive2 { name="ramsvm"; version="2.2"; sha256="105f3g2s47sb4vxf88k26lws60ay1h8n3g48rmyhpzhgmwc13027"; depends=[doParallel foreach]; }; + randChecks = derive2 { name="randChecks"; version="0.2.1"; sha256="0fwbacnv38zf0014h9l45spfa4yd4wdif7m2a1jbl11pmns70wxm"; depends=[]; }; randNames = derive2 { name="randNames"; version="0.2.3"; sha256="0vhzg14yg4c9inzxin8prfzh6nhf8fvbi4hbn122fyqyp5d6f8zi"; depends=[httr jsonlite tibble]; }; randaes = derive2 { name="randaes"; version="0.3"; sha256="14803argy0xdd8mpn4v67gbp90qi2is4x6na9zw7i9pm504xji1x"; depends=[]; }; randcorr = derive2 { name="randcorr"; version="1.0"; sha256="1hnr0wvbsmgql39wlj4z2qbqn0fdfwyihfl6xgrlzvs9vrmig5xx"; depends=[]; }; randgeo = derive2 { name="randgeo"; version="0.3.0"; sha256="14hlh9k66lcbf0xhnxx12rrnyl8awqcsm3csvxdz23s5wnm2ya5p"; depends=[]; }; randnet = derive2 { name="randnet"; version="0.2"; sha256="1hiqwz9q9nd8s5p97m6hgam1hmp33y0lks4sybzj2w3r5qdb1g2a"; depends=[AUC entropy irlba Matrix poweRlaw RSpectra]; }; + rando = derive2 { name="rando"; version="0.2.0"; sha256="085g48yzwapxxfmm5bvkz0v7pmjwmakb7nl128550ppgc16wxkgb"; depends=[dplyr glue rlang tibble]; }; random = derive2 { name="random"; version="0.2.6"; sha256="0sdhagwjlhldb8hn6h4nd1sflzhwkapzybdlb8hzisy3w2ygjn9b"; depends=[curl]; }; random_polychor_pa = derive2 { name="random.polychor.pa"; version="1.1.4-4"; sha256="19yzpjidw5pbrqfa5ln5hgghv0mq3cwl92z2isq25yydfl6qsl6h"; depends=[boot MASS mvtnorm nFactors psych sfsmisc]; }; randomForest = derive2 { name="randomForest"; version="4.6-14"; sha256="0kbmm0l42fc2d1rdq0l7k09d34kd87q4lx651ffsic4y84h8kf7l"; depends=[]; }; randomForestExplainer = derive2 { name="randomForestExplainer"; version="0.10.1"; sha256="1ny8c3vn2zvdx12avwvlm4lp648jigkrkcvnhf5qmj8rh0w069v0"; depends=[data_table dplyr DT GGally ggplot2 ggrepel randomForest ranger reshape2 rmarkdown]; }; - randomForestSRC = derive2 { name="randomForestSRC"; version="2.9.3"; sha256="05ifvj49jv0n5p6k46milpgj9r10sc5aw23fypyyibdgwpwvwixw"; depends=[]; }; + randomForestSRC = derive2 { name="randomForestSRC"; version="2.11.0"; sha256="0i1p3hd061lkgafbw6b25d6gpb45j4jkjchawd455g90pd1zm5b2"; depends=[data_tree DiagrammeR]; }; randomGLM = derive2 { name="randomGLM"; version="1.02-1"; sha256="031338zxy6vqak8ibl2as0l37pa6qndln0g3i9gi4s6cvbdw3xrv"; depends=[doParallel foreach MASS]; }; - randomLCA = derive2 { name="randomLCA"; version="1.0-16"; sha256="1np63fvxrf7mkgnpfii77wr8drqgfrbav0jzczp2gj6fw85ypib3"; depends=[boot fastGHQuad lattice Matrix Rfast]; }; - randomNames = derive2 { name="randomNames"; version="1.4-0.0"; sha256="1kchngfjv53n32z2qjrplp2xmssl8gjx1y3m7bxsfq1wjzj52qf5"; depends=[crayon data_table toOrdinal]; }; + randomLCA = derive2 { name="randomLCA"; version="1.1-1"; sha256="08flank5pmyh5ih63bfw5qaby3g8vfh8p36sjbmxfylicdydfjl7"; depends=[boot doParallel doRNG fastGHQuad foreach lattice Matrix Rfast]; }; + randomNames = derive2 { name="randomNames"; version="1.5-0.0"; sha256="1lv1vqb4wgs0j1gqy84dpa30qsvbp6928zpshczpw87yf32k71vh"; depends=[crayon data_table toOrdinal]; }; randomUniformForest = derive2 { name="randomUniformForest"; version="1.1.5"; sha256="1amr3m7h5xcb8gahrr58233chsnx1naf9x5vpjy9p5ivh71xcxf7"; depends=[cluster doParallel foreach ggplot2 gtools iterators MASS pROC Rcpp]; }; randomcoloR = derive2 { name="randomcoloR"; version="1.1.0.1"; sha256="0rqh1zrdza12qq7475f77yvryhh4hj0pg25lb8ywrcljgaj53bnb"; depends=[cluster colorspace Rtsne scales stringr V8]; }; randomizationInference = derive2 { name="randomizationInference"; version="1.0.3"; sha256="0x36r9bjmpx90fz47cha4hbas4b31mpnbd8ziw2wld4580jkd6mk"; depends=[matrixStats permute]; }; @@ -13503,8 +14041,9 @@ in with self; { randtests = derive2 { name="randtests"; version="1.0"; sha256="03z3kxl4x0l91dsv65ld9kgc58z82ld1f4lk18i18dpvwcgkqk82"; depends=[]; }; randtoolbox = derive2 { name="randtoolbox"; version="1.30.1"; sha256="0qg20ar6qns858jdzqhmfq7yji81czhr6cim257958gqpj66sn95"; depends=[rngWELL]; }; rangeBuilder = derive2 { name="rangeBuilder"; version="1.5"; sha256="17wyf9ljgdbpxgl9gy6f1279h88k0rjfcarw7kgp145bm3c36jwf"; depends=[alphahull cleangeo pbapply raster Rcpp rgdal rgeos sp stringi]; }; - rangeMapper = derive2 { name="rangeMapper"; version="0.3-7"; sha256="0b457qxlhwcnsw9x60mccvivq7a5cg7lkyfmsfva7qaipnjixcmh"; depends=[classInt data_table doFuture foreach future future_apply ggplot2 gridExtra lattice magrittr maptools raster RColorBrewer rgdal rgeos RSQLite sp]; }; + rangeMapper = derive2 { name="rangeMapper"; version="2.0.2"; sha256="00wnjvmqkqjdw1r60z95ax0zh5wsvclk5qqwwwv50d0p9kjv4939"; depends=[data_table DBI exactextractr future future_apply glue magrittr progressr raster RSQLite sf]; }; rangeModelMetadata = derive2 { name="rangeModelMetadata"; version="0.1.3"; sha256="028q6lxz1ljna38cz5647yv0vzjw3jpsqwqhzf5rshmvfi8c0vv2"; depends=[dplyr jsonlite MASS raster rgbif rgdal rgeos shiny sp spatstat spocc spThin]; }; + rangemap = derive2 { name="rangemap"; version="0.1.16"; sha256="0pwimfp3hz4zv9z7qhk4hm6m10gkmjgxxm0zgax92rmag69267xb"; depends=[concaveman dplyr maps maptools raster rgdal rgeos rgl rnaturalearthdata scales sf sp spatial]; }; ranger = derive2 { name="ranger"; version="0.12.1"; sha256="1vr5akgh388iivrxi0g4pl2npq9dc4cim3ljk4kjf637q058wc7w"; depends=[Matrix Rcpp RcppEigen]; }; rankFD = derive2 { name="rankFD"; version="0.0.5"; sha256="0988fr18faahb9z0514pljmby6pxmn3b0ynb6ymmi3n4vpzzj4ki"; depends=[coin lattice MASS Matrix]; }; rankdist = derive2 { name="rankdist"; version="1.1.4"; sha256="1xqrkss8d5vv3blqpvrvdczsygphbx259hy9j7w9b2ahssw8cjr5"; depends=[hash optimx permute Rcpp]; }; @@ -13512,32 +14051,34 @@ in with self; { rapbase = derive2 { name="rapbase"; version="1.10.0"; sha256="0x1xr0qw5qq9rsas3ysxlvmim3jhkf5za4lxr6f15vx4rjfx77wv"; depends=[DBI devtools digest gistr httr knitr magrittr readr RJDBC RMariaDB sendmailR shiny yaml]; }; rapiclient = derive2 { name="rapiclient"; version="0.1.3"; sha256="1pm4kdga2nz1cpmchdb0ad8gr3bqfm84b1kl32cyc0x3x5rr2syz"; depends=[httr jsonlite yaml]; }; rapidjsonr = derive2 { name="rapidjsonr"; version="1.2.0"; sha256="07zdirhbzmvq3cp4xn8ngk1lgxbbabzays315zxbs3sxrz6lzjb2"; depends=[]; }; + rapidoc = derive2 { name="rapidoc"; version="8.4.3"; sha256="1i7f122iigbaah1c3g5vfmnypwilcgc1i3d0l3985s5fjj44dnhn"; depends=[jsonlite]; }; rapidxmlr = derive2 { name="rapidxmlr"; version="0.1.0"; sha256="14pa08yp8xmbqk8wwinz1xsphx75xq6vg8zgzcxc5zgmcf0ja5if"; depends=[]; }; - rappdirs = derive2 { name="rappdirs"; version="0.3.1"; sha256="0ji6sg3bdn5gazkq14xmmcq7jnbsyxw4lzmmbgv6526j2vn93n1g"; depends=[]; }; - rapport = derive2 { name="rapport"; version="1.0"; sha256="1i1zawar5yxw23km74mrvaxnc9hr06kqjvbm046c09cqi6pw0hjh"; depends=[pander rapportools stringr yaml]; }; + rappdirs = derive2 { name="rappdirs"; version="0.3.3"; sha256="1161i3jgjvzjv4p8qbz9r976fnggkcrw3mlj4yd1h2svnijrz5a9"; depends=[]; }; + rapport = derive2 { name="rapport"; version="1.1"; sha256="14cbi3yag91lnr1yrbk8ra6j615z5a6h136dj3r6v628qahrhmsg"; depends=[pander rapportools stringr yaml]; }; rapportools = derive2 { name="rapportools"; version="1.0"; sha256="1sgv4sc737i12arh5dc3263kjsz3dzg06qihfmrqyax94mv2d01b"; depends=[pander plyr reshape]; }; - rapsimng = derive2 { name="rapsimng"; version="0.1.0"; sha256="087qjx5p0z4gv6zp52k4k49gnyxl1b6m0iy5337is5fv6r6rknsl"; depends=[dplyr jsonlite magrittr rlang tibble tidyr xml2]; }; + rappsflyer = derive2 { name="rappsflyer"; version="0.2.0"; sha256="1n0h4iqnzb5xr531b6nvqsjx4mpsg1gp85av2b9gqg0wrbzzizm7"; depends=[dplyr httr lgr retry stringr tidyr]; }; + rapsimng = derive2 { name="rapsimng"; version="0.2.0"; sha256="0cbszzx88n78zli7v9kklxqwjbp3mipjk6gjm6xz62f31wr2x11n"; depends=[dplyr jsonlite magrittr rlang tibble tidyr]; }; raptr = derive2 { name="raptr"; version="0.1.7"; sha256="1gm99nnvn3b9xz6216masv7ji8j8vrkprzprkba5y1h22gzwxd3n"; depends=[adehabitatHR assertthat BH boot doParallel ggplot2 hypervolume ks Matrix mvtnorm PBSmapping plyr RandomFields raster RColorBrewer Rcpp RcppEigen rgdal rgeos RgoogleMaps scales shape sp]; }; rare = derive2 { name="rare"; version="0.1.1"; sha256="0j78ilswiaxdp9107psiw8ibxncd7i81z2njhfqf0n7532pbvjss"; depends=[glmnet Matrix Rcpp RcppArmadillo]; }; rareGE = derive2 { name="rareGE"; version="0.1"; sha256="0v3a2wns77q923ilddicqzg0108f8kmfdnsff1n65icin7cfzsny"; depends=[MASS nlme survey]; }; rareNMtests = derive2 { name="rareNMtests"; version="1.1"; sha256="13r2hipqsf8z9k48ha5bh53n3plw1whb7crpy8zqqkcac8444b2z"; depends=[vegan]; }; rarms = derive2 { name="rarms"; version="1.0.0"; sha256="11wjxd3pxvjv1j2nz26l8f0kykk9w6lf08izhivfngp63dk2akns"; depends=[jsonlite]; }; - rasciidoc = derive2 { name="rasciidoc"; version="3.0.0"; sha256="17k812ly2iagdy29c29iqn9yxg60zvsq330vcbwxqilgnm3h9kkc"; depends=[checkmate document git2r highr knitr reticulate xfun]; }; + rasciidoc = derive2 { name="rasciidoc"; version="3.1.1"; sha256="1h5263r4ch2ssh7v61ah0x7nvrdnfagmrdfddbgfx5y9fphkzcz4"; depends=[checkmate document fritools gert highr knitr reticulate]; }; rasclass = derive2 { name="rasclass"; version="0.2.2"; sha256="1lsmv8kh519mz3szb4k9s17fz1480cw0i4qk12givhhm2rpzjy50"; depends=[car e1071 nnet randomForest RSNNS]; }; - raster = derive2 { name="raster"; version="3.4-5"; sha256="19g4chd0nyhnz6hc2j0v9ahjcgz64vvja4y3mrj1pfis1dwhsqn6"; depends=[Rcpp sp]; }; + raster = derive2 { name="raster"; version="3.4-10"; sha256="1x9d364r6wsm261a0s303mfalk79d4h0lwqlvbwzg7khmz991rlr"; depends=[Rcpp sp]; }; rasterDT = derive2 { name="rasterDT"; version="0.3.1"; sha256="1dl083jm4x0shl7lq4in2alksgi63hp1p7j2cnsvkmwjaxygzm9v"; depends=[data_table fasterize raster sf]; }; rasterImage = derive2 { name="rasterImage"; version="0.4.0"; sha256="191m5k1rbbwziznmxbsq4g55afkw8gb5011i70f3wx3dscr3phxz"; depends=[plotrix]; }; rasterKernelEstimates = derive2 { name="rasterKernelEstimates"; version="1.0.1"; sha256="1733ic1hxym3gyibk2ysy5zzq7s9rbf6jx63x7irnrcavq151f8s"; depends=[raster]; }; rasterList = derive2 { name="rasterList"; version="0.5.8"; sha256="0q7apglxzpah04463z07cpkzyd6l6dbbdhm601brzh6yk75z20vh"; depends=[raster]; }; - rasterVis = derive2 { name="rasterVis"; version="0.49"; sha256="0d12h7xqcwy1wps6yya9nzfppbnsxpmbkqmy3a8pvxpg81l632kk"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp viridisLite zoo]; }; - rasterdiv = derive2 { name="rasterdiv"; version="0.2-2"; sha256="1sqsxjpjwv20nphga8bbjc904bl4j7fiwfrz5q3b1m81xjnkj7rv"; depends=[foreach progress proxy raster svMisc]; }; + rasterVis = derive2 { name="rasterVis"; version="0.50.2"; sha256="0fl766wx5jz8ylpd28czkvl32pk1s57nbfsn8kxrwfvx5cfnfkxr"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp terra viridisLite zoo]; }; + rasterdiv = derive2 { name="rasterdiv"; version="0.2-3"; sha256="1n0zrncda3nk4x8l9wb0acdx25dlki9wwrg874qwhd73cx0iy0rp"; depends=[foreach progress proxy raster svMisc]; }; rasterize = derive2 { name="rasterize"; version="0.1"; sha256="18nrhmq1qmi05rkyr86xsyc8nz0fbdpf2d45h62bbfzbfynqd4qy"; depends=[png]; }; rasterly = derive2 { name="rasterly"; version="0.2.0"; sha256="1fv0ayh8r78qss7ikcwnj0i5x8iyz4c3icsfb554zji9bw30x7qr"; depends=[data_table ggplot2 magrittr plotly Rcpp rlang]; }; rasterpdf = derive2 { name="rasterpdf"; version="0.1.1"; sha256="0zi54nifbb4dzb29i8rskynblw3z42vzaykwbq30ia5zs9q1bvm5"; depends=[png]; }; ratPASTA = derive2 { name="ratPASTA"; version="0.1.2"; sha256="1ddxryccsq0v3lvnjyl8x4z1yxw59zq5g4lwh5pnn1cykl0z7q1f"; depends=[dplyr ggplot2 ggpubr ggsci hms lubridate magrittr plyr rjson stringr tidyr]; }; ratelimitr = derive2 { name="ratelimitr"; version="0.4.1"; sha256="06x759jxr5zcnvg9q120n5bpipkb16piw15kxrpk7i918mby889b"; depends=[assertthat]; }; - ratematrix = derive2 { name="ratematrix"; version="1.2.2"; sha256="08zc3yacgmd7y50nykbdqwq655jn3gz4x1ywrhvz8fymsdhdd39g"; depends=[ape coda corpcor ellipse geiger MASS mvMORPH phylolm Rcpp RcppArmadillo readr]; }; - rater = derive2 { name="rater"; version="1.0.0"; sha256="1z0da2x85gb5qizgqaki55yyvilcbcwz5f5lmap1iv6l3qs3475n"; depends=[BH ggplot2 Rcpp RcppEigen RcppParallel rlang rstan rstantools StanHeaders]; }; + ratematrix = derive2 { name="ratematrix"; version="1.2.3"; sha256="0bnwwkmjsxlv4qkkwq93d7nrqb7pyyd70ffpm98xsxfy1ygdxjqq"; depends=[ape coda corpcor ellipse geiger MASS mvMORPH phylolm Rcpp RcppArmadillo readr]; }; + rater = derive2 { name="rater"; version="1.1.0"; sha256="18yfrsjv5xzhdn017dvacn7wrp89hz0cp57hlhimch498nqazkvs"; depends=[BH ggplot2 loo Rcpp RcppEigen RcppParallel rlang rstan rstantools StanHeaders]; }; rateratio_test = derive2 { name="rateratio.test"; version="1.0-2"; sha256="1a2v12z2dr893ha80fhada1820z5ih53w4pnsss9r9xw3hi0m6k5"; depends=[]; }; raters = derive2 { name="raters"; version="2.0.1"; sha256="16jnx6vv39k4niqkdlj4yhqx8qbrdi99bwzxjahsxr12ab5npbp1"; depends=[]; }; ratesci = derive2 { name="ratesci"; version="0.3-0"; sha256="1mdx47xpgjrjbb3lybajdmxb87dqr6cvv3fsvwfx0n629mjbih4z"; depends=[]; }; @@ -13547,16 +14088,17 @@ in with self; { rattle_data = derive2 { name="rattle.data"; version="1.0.2"; sha256="0cnmyzvy23jc4vz521c3jg0w4165waycvy5014l5773fy19zq75c"; depends=[]; }; raveio = derive2 { name="raveio"; version="0.0.3"; sha256="02f8y2q3s21vr2d27ix707jwglm3pkr800f5fw5xfnk7jzs347gc"; depends=[data_table dipsaus edfReader fst glue hdf5r ini jsonlite later lazyarray R_matlab R6 rlang stringr yaml]; }; ravelRy = derive2 { name="ravelRy"; version="0.1.0"; sha256="07mywv57rw2b309i2qisbpx1x3sb3z6n2b5gia9bdmb2m4hhpdai"; depends=[dplyr httr jsonlite purrr tibble tidyr]; }; - raw = derive2 { name="raw"; version="0.1.6"; sha256="0hnqwa9pwj3k2y0bs6hxrvbwksjyq0q6m73c9hhlafg8g3lkyxnf"; depends=[]; }; + raven_rdf = derive2 { name="raven.rdf"; version="0.2.0"; sha256="12jy3md6d1qwzkks5iljn4h0iv5lj3n39ll7r3fvrxjwh7afvw7r"; depends=[]; }; + raw = derive2 { name="raw"; version="0.1.8"; sha256="1y2vhpgigzkd2xyj3986wlzm1g3pp99w6fspmhlff5czd73g16is"; depends=[]; }; rawKS = derive2 { name="rawKS"; version="0.1.0"; sha256="1yiw9imhgij49qbm9hk6psb73zngqmxxwnaxq144ydwb7fbk6j0z"; depends=[dplyr ggplot2 magrittr ROCR tidyr]; }; rawr = derive2 { name="rawr"; version="0.1.1"; sha256="0jlmsvz7p1yw8gpfy81b6jkwqyqmaj443xl2cmp4rddiimfcczdi"; depends=[clipr dplyr jsonlite rvest stringr xml2]; }; raws_profile = derive2 { name="raws.profile"; version="0.1.0"; sha256="04f7wk7x9j3rb6nn3zqss9vw0h9a4vpcjyilc2vqy0fm2by41xkg"; depends=[stringr tibble withr]; }; - rayimage = derive2 { name="rayimage"; version="0.3.1"; sha256="0xqasgyk4ws79325p6gxdkr0mf3lzd097bmzhizsxdp1gjma0r52"; depends=[jpeg magrittr png progress raster Rcpp RcppArmadillo]; }; - rayrender = derive2 { name="rayrender"; version="0.14.0"; sha256="0vikd5ahap7aahsv66xwkysj82hnhqgwf4dqfjrk82akagyznzg3"; depends=[assertthat decido magrittr png progress purrr raster rayimage Rcpp RcppThread tibble]; }; - rayshader = derive2 { name="rayshader"; version="0.19.2"; sha256="0qhv1wxgkkgksmfq19c894lgiiw4i22w7cwjs2x1r8n2b7xgb178"; depends=[doParallel foreach magrittr png progress raster rayimage Rcpp RcppArmadillo rgl scales terrainmeshr]; }; + rayimage = derive2 { name="rayimage"; version="0.5.1"; sha256="0z5hhfd8nph86581xibnj2caly59ws5ypsw9x5xnznxq27p0vxx1"; depends=[jpeg magrittr png progress Rcpp RcppArmadillo]; }; + rayrender = derive2 { name="rayrender"; version="0.21.2"; sha256="0s88p9yqm2xxvwpxbnmhs3yay1gd904dgsik9fy6551cym1asl1n"; depends=[assertthat decido magrittr png progress purrr raster rayimage Rcpp RcppThread spacefillr tibble]; }; + rayshader = derive2 { name="rayshader"; version="0.24.10"; sha256="1wdqbbk8f0vxha0awgfv4c8n7yndy2k1q6f3rkr3f5j84wwqfjbx"; depends=[doParallel foreach magrittr png progress raster rayimage Rcpp RcppArmadillo rgl scales terrainmeshr]; }; raytracing = derive2 { name="raytracing"; version="0.1.0"; sha256="052j053l4104pk7cbkkqrj3kkiip9lv2lf0xl2xsray62n6p07m4"; depends=[ncdf4 sf units]; }; rbace = derive2 { name="rbace"; version="0.2.2"; sha256="04jcbrcp0l1v2q8hhwr5w72spdja8r0fw71v68kx39yigy7m1sgp"; depends=[crul data_table tibble xml2]; }; - rbacon = derive2 { name="rbacon"; version="2.5.0"; sha256="1ivxa71gc7hxb8qqlf84afq0a4yzwb3ya77lifssplhfdajrn58a"; depends=[coda IntCal Rcpp]; }; + rbacon = derive2 { name="rbacon"; version="2.5.3"; sha256="1c6whi8vfhplazqc5zlrzxyr632l496axfpa8a2jp27ndn8d3mcm"; depends=[coda IntCal Rcpp]; }; rbart = derive2 { name="rbart"; version="1.0"; sha256="1byfm1ycw9nfhdblqklyn8pxn6b9q5fa3inbgfpynqpsid97ig35"; depends=[Rcpp]; }; rbefdata = derive2 { name="rbefdata"; version="0.3.5"; sha256="12mcqz0pqgwfw5fmma0gwddj4zk0hpwmrsb74dvzqvgcvpfjnv98"; depends=[RColorBrewer RCurl rjson rtematres wordcloud XML]; }; rbenchmark = derive2 { name="rbenchmark"; version="1.0.0"; sha256="010fn3qwnk2k411cbqyvra1d12c3bhhl3spzm8kxffmirj4p2al9"; depends=[]; }; @@ -13565,16 +14107,17 @@ in with self; { rbhl = derive2 { name="rbhl"; version="0.9.0"; sha256="0n9jxyrpq1s0yq13ylkhm0qcjlm8b25p19vpxv2s4wxan758zypd"; depends=[crul jsonlite plyr tibble xml2]; }; rbi = derive2 { name="rbi"; version="0.10.3"; sha256="09hqv235fry60nqvd1is8n7szkq96w160xpw2pdxqdxvlh52cf2r"; depends=[data_table ncdf4 processx reshape2]; }; rbi_helpers = derive2 { name="rbi.helpers"; version="0.3.2"; sha256="1inbf3kpl4y46m7v36akrr24112y4sd3d8yqia16i32wxf53wql5"; depends=[data_table lubridate Matrix rbi reshape2]; }; - rbibutils = derive2 { name="rbibutils"; version="2.0"; sha256="1vfg2188i4dyhrmvnwpsh2la8qkd4wkryz2fpj4cppi1wfz3ml83"; depends=[]; }; + rbibutils = derive2 { name="rbibutils"; version="2.1.1"; sha256="0vk8pc9nsf28jxlb2vv1kydqfnvlh7q4kd2wyva4mwhl51s36bpl"; depends=[]; }; rbin = derive2 { name="rbin"; version="0.2.0"; sha256="18g6s4m0yc1bzrymk8km553kcwi4vj16b6mxw2lmv48z7243iq87"; depends=[data_table ggplot2]; }; + rbioapi = derive2 { name="rbioapi"; version="0.7.0"; sha256="1j6fnz088xv3wpglnx9yaf65v22m7j3786iv0nx310aq5wsp39qq"; depends=[httr jsonlite]; }; rbiom = derive2 { name="rbiom"; version="1.0.2"; sha256="0zg1ibxz3h9mmb4s2gwlliahni6dgqqn849pcxcyhpzyc81av85y"; depends=[magrittr openxlsx plyr R_utils Rcpp RcppParallel rjson slam]; }; - rbiorxiv = derive2 { name="rbiorxiv"; version="0.2.0"; sha256="1xb0ndwfnk26qifnc7fy6jy6sm30p5264w1lk8mayj90nf9b1aks"; depends=[httr jsonlite]; }; + rbiorxiv = derive2 { name="rbiorxiv"; version="0.2.1"; sha256="19ld7v9nd0flfgp6y8hbgxab0f2nx1qih8knd6ivg42rnmi10ycj"; depends=[curl httr jsonlite]; }; rbiouml = derive2 { name="rbiouml"; version="1.10"; sha256="12p6715dji0na80icc5qlfjvlwr5p5h4s4156kpgd5xz0d6rgaxx"; depends=[RCurl RJSONIO]; }; rbison = derive2 { name="rbison"; version="1.0.0"; sha256="0g586hsqci4amci10zjq6xpjvxfjr6rv5i63vp85v3z6bkwfamwr"; depends=[crul data_table dplyr ggplot2 jsonlite mapproj plyr sp tibble]; }; rbit = derive2 { name="rbit"; version="1.0.0"; sha256="09ywr711gv0vgfims2vfcxk3rnd0iadzlksil0q9159yarapfc59"; depends=[R6]; }; rbitcoinchartsapi = derive2 { name="rbitcoinchartsapi"; version="1.0.4"; sha256="0r272jvjh3rzch8dmn4s0a5n5k6dsir7pr4qswzfvafqjdiwjajz"; depends=[RCurl RJSONIO]; }; rblt = derive2 { name="rblt"; version="0.2.4.5"; sha256="1pfg8sgm532czz3lhpx7dmg5zik3bc0p4vdq9s0qk5zgq7nnm9sj"; depends=[data_table dygraphs hdf5r shiny xts]; }; - rbmn = derive2 { name="rbmn"; version="0.9-3"; sha256="08rcxvxi1wav2ysnp5ydkyinykcjw3vwb56g8zdx9ziqbd7cwkgv"; depends=[MASS]; }; + rbmn = derive2 { name="rbmn"; version="0.9-4"; sha256="039scbjzigj9ks62l8yagfpr3bpslvxg1nqv22pyw8jay8i6993g"; depends=[MASS]; }; rbokeh = derive2 { name="rbokeh"; version="0.5.1"; sha256="122slyj1a4v7ph1zdcradzkr4hjncg34i2ld82mbk8nf72ra7ss8"; depends=[digest ggplot2 gistr hexbin htmlwidgets jsonlite lazyeval magrittr maps pryr scales]; }; rbounds = derive2 { name="rbounds"; version="2.1"; sha256="1h334bc37r1vbwz1b08jazsdrf6qgzpzkil9axnq5q04jf4rixs3"; depends=[Matching]; }; rbridge = derive2 { name="rbridge"; version="1.0.2"; sha256="0m4c61rdrhq1jw3rwq2ld29g5dchbk4sfpnq0wmwbvzhdjq76plc"; depends=[dplyr Matrix Rcpp RcppArmadillo]; }; @@ -13586,7 +14129,7 @@ in with self; { rbw = derive2 { name="rbw"; version="0.2.0"; sha256="01y33gbljb6bvbdsr42vgfi75sywhwn313y5jv1y4kkc4iqzag1r"; depends=[rlang]; }; rcane = derive2 { name="rcane"; version="1.0"; sha256="0p2mgkq6fh0n289n2h19c52lnqxl05wvpmd6nwvgnjqwa4wwpa7r"; depends=[]; }; rcanvec = derive2 { name="rcanvec"; version="0.2.1"; sha256="0gsk2cfiysxjw2lrnpl2l524lvhh9nhnyyh79n8p7vykyqj711yn"; depends=[rgdal sp]; }; - rcarbon = derive2 { name="rcarbon"; version="1.4.1"; sha256="1l73ki1vziglin814dxp32n3pd1agbgs7h4b6mm3a9s98a32k2hf"; depends=[doSNOW foreach iterators knitr snow sp spatstat]; }; + rcarbon = derive2 { name="rcarbon"; version="1.4.2"; sha256="04s1gqrfa5hy93jnqj5sqii49gz7mq7nm23jnd0iwl48f847vka1"; depends=[doSNOW foreach iterators knitr snow sp spatstat spatstat_core spatstat_geom spatstat_linnet]; }; rcartocolor = derive2 { name="rcartocolor"; version="2.0.0"; sha256="08ljaag2mnhz2671zvwji1sp003z94lz30vjidmybm9fp8piqw5g"; depends=[ggplot2 scales]; }; rcbalance = derive2 { name="rcbalance"; version="1.8.5"; sha256="15qlk3cqwsvixl17l1fxcajrabmz4y7q5gz0a1pd66f6i1xskcqq"; depends=[MASS plyr]; }; rcbsubset = derive2 { name="rcbsubset"; version="1.1.4"; sha256="0sfsmnxs4c8blzg0bb2ffb2xcsjv7pp39arnda988f7b2aas59wj"; depends=[MASS plyr]; }; @@ -13596,17 +14139,20 @@ in with self; { rcdd = derive2 { name="rcdd"; version="1.2-2"; sha256="0pzpbqnlgzr240iici70278py5wnbbxkzlgn112f9wv5ga3riric"; depends=[]; }; rcdk = derive2 { name="rcdk"; version="3.5.0"; sha256="05bz2pnvfci8sd9l4i0jay8rwvfnw87r9xqzvq5306mfbhik20fy"; depends=[fingerprint iterators itertools png rcdklibs rJava]; }; rcdklibs = derive2 { name="rcdklibs"; version="2.3"; sha256="16ijvzsc1irpz1z2xd82i2saafsvpn0x5lr54c5gx9bfb35gacyp"; depends=[rJava]; }; - rchallenge = derive2 { name="rchallenge"; version="1.3.2"; sha256="1qib09vlajw62zdhx8gkmmhlgc8k0dqdxx8ai8zdwxhfff253glc"; depends=[knitr rmarkdown]; }; - rcheology = derive2 { name="rcheology"; version="4.0.3.0"; sha256="00qv9778k4w8ciz9kgycnkmamp91qbz1bsv835qshnvi0p54rkmw"; depends=[]; }; + rchallenge = derive2 { name="rchallenge"; version="1.3.4"; sha256="0i402p6ccjn10ix5nln30pab5nd78hg5q4ivvgc4i99nx7aq0xpx"; depends=[knitr rmarkdown]; }; + rcheology = derive2 { name="rcheology"; version="4.0.5.0"; sha256="0xnya1505ks6zqmv1szjvy46mga3bilfyj6nkdgjln414lsn9a67"; depends=[]; }; rchess = derive2 { name="rchess"; version="0.1"; sha256="0qnvvvwcl02rmqra9m7qnhy40cbavswbq6i0jm47x6njmr1gpfhy"; depends=[assertthat dplyr ggplot2 htmlwidgets plyr R6 V8]; }; rchie = derive2 { name="rchie"; version="1.0.2"; sha256="1m89mwq5f81yr2vc3wvnxkpm04bad11sx5fllcd3yy8ilghmbfp6"; depends=[jsonlite V8]; }; rcicr = derive2 { name="rcicr"; version="0.3.4.1"; sha256="1sa13sbhx64cf8szr2811iq4a1asb8d3k0igxw6fbssij2lwbxzp"; depends=[aspace dplyr jpeg matlab scales]; }; rcites = derive2 { name="rcites"; version="1.1.0"; sha256="185s26pzgg3y3d890q5mk1rn75yipd6kfgnhbafnqgk7qy09v8lx"; depends=[cli httr jsonlite]; }; rcitoid = derive2 { name="rcitoid"; version="0.1.0"; sha256="11iqdj1q983w28fh17rqvmhs41ks09b24p408nl7hz4iqg9c7lpi"; depends=[crul curl fauxpas jsonlite]; }; - rclipboard = derive2 { name="rclipboard"; version="0.1.2"; sha256="04vkxz2wqb3q3igjqgaaim3sb71h046c2b8rhvg51hkp1win8s5w"; depends=[shiny]; }; + rclipboard = derive2 { name="rclipboard"; version="0.1.3"; sha256="087ih0b3bizgknccy7gm47r1v9wjmj2fb8i4bp4rszd2kdcbwh29"; depends=[shiny]; }; rcmdcheck = derive2 { name="rcmdcheck"; version="1.3.3"; sha256="1d4kzgfqy72r6b7bn1j4znyksrycgypx1jjvpv9lrmvn37mpkdhs"; depends=[callr cli crayon desc digest pkgbuild prettyunits R6 rprojroot sessioninfo withr xopen]; }; - rco = derive2 { name="rco"; version="1.0.1"; sha256="0sjfgblvrnd1jmvqgxc9xm94c46kmr9syxynx9zdd9gsqcwc6hza"; depends=[]; }; - rcompanion = derive2 { name="rcompanion"; version="2.3.26"; sha256="1ic2rmp00kf3sr04jmvlx602jkqgvj46xfjdi45f4z201vli9ihd"; depends=[boot coin DescTools EMT lmtest multcompView nortest plyr]; }; + rco = derive2 { name="rco"; version="1.0.2"; sha256="1ch7ak802ri4jr10jqvhvdi6q9fhyhql15ja395xfv6j81d5cmia"; depends=[]; }; + rcol = derive2 { name="rcol"; version="0.1.0"; sha256="0pnpzyljrks0cfxc5czhyci6gq9685lccvcbxwnwr3dfxypj5cq8"; depends=[crul data_table glue jsonlite tibble]; }; + rcolors = derive2 { name="rcolors"; version="0.1.0"; sha256="19lkwd1wdwq9if957qjgrz9mq6s8x49dig8snivhw9ksffcfy4xp"; depends=[magrittr]; }; + rcompanion = derive2 { name="rcompanion"; version="2.4.0"; sha256="0a8cn766zh6mpiak73zfg5xmiqa7nf8ynmaz24clwqnkk94rprpb"; depends=[boot coin DescTools EMT lmtest multcompView nortest plyr]; }; + rcompendium = derive2 { name="rcompendium"; version="0.5.1"; sha256="0zg7051c4wg1jbdf7hshswy53y24x8h8myhshvg9z2pg8mvd8sir"; depends=[clisymbols crayon devtools gert gh gtools rmarkdown rstudioapi stringr usethis xfun]; }; rcoreoa = derive2 { name="rcoreoa"; version="0.4.0"; sha256="0q5dprz0ag04w265bk7isd2lr61nahf223qza47m0izd9nyi9h8a"; depends=[crul hoardr jsonlite pdftools]; }; rcorpora = derive2 { name="rcorpora"; version="2.0.0"; sha256="1b8xa81mn3afadz77576vda9b0d99f1k096drxrpqd989g993aqy"; depends=[jsonlite]; }; rcosmo = derive2 { name="rcosmo"; version="1.1.2"; sha256="01a8g81ld0dy2bn0mqmpdz2bpd7g52jn67136hhvpxndnnlh384k"; depends=[cli entropy FITSio geoR mmap nnls Rcpp rgl tibble]; }; @@ -13615,50 +14161,53 @@ in with self; { rcrypt = derive2 { name="rcrypt"; version="0.1.1"; sha256="002r5wr0bmqbj014iz8wacj883j6gqcxc786m6p9a7zdrjpx2pqi"; depends=[]; }; rct3 = derive2 { name="rct3"; version="1.0.4"; sha256="1xm5kni2mnpzby8basmwbm1abg615i4mlf6fn9jr5il94q1bdgly"; depends=[]; }; rcube = derive2 { name="rcube"; version="0.5"; sha256="1162y7fs3fsbb5jj66g9kvxxhggprlifrabqbb9lqm8rrdwhz3r9"; depends=[magrittr]; }; - rdacca_hp = derive2 { name="rdacca.hp"; version="0.1.0"; sha256="0cnf46xs7q0bgwi4s3qdyqsq21nas2sas9vkn8i555h39snpp41v"; depends=[vegan]; }; + rdacca_hp = derive2 { name="rdacca.hp"; version="0.5-6"; sha256="1r18bvb66xiylmbb2cbqfhm1m7ifxxpzrpj6zy80raq322xn2pa0"; depends=[ggplot2 vegan]; }; rdatacite = derive2 { name="rdatacite"; version="0.5.2"; sha256="07zbxr89fxx9nlp5w7n60rjm3prck08h0fjrq0pnpkbnnkx9cv9a"; depends=[crul jsonlite tibble]; }; rdataretriever = derive2 { name="rdataretriever"; version="3.0.0"; sha256="1a01lrzn7gcxid01r0l8nnbpbryvs07z9nf43l1143w2n9bvgn24"; depends=[reticulate semver]; }; rdbnomics = derive2 { name="rdbnomics"; version="0.6.4"; sha256="1h32wxjykz9y3k48rx31cvy485gsx8ix3194r2zgxlwdza3rl3lb"; depends=[curl data_table jsonlite]; }; rdd = derive2 { name="rdd"; version="0.57"; sha256="1lpkzcjd18x51wzr4d1prdjfsw5978z6zap65psfs02nszy69nqp"; depends=[AER Formula lmtest sandwich]; }; - rddensity = derive2 { name="rddensity"; version="2.1"; sha256="1zdzsz5xca3y05h4jd3z30s0521xxz6z96ns887pdi96xxsgdila"; depends=[ggplot2 lpdensity]; }; + rddensity = derive2 { name="rddensity"; version="2.2"; sha256="00xmdy3885j3j5sh3civlgggscr946gh7ibd6namqhbzhsnpwrd3"; depends=[ggplot2 lpdensity]; }; rde = derive2 { name="rde"; version="0.1.0"; sha256="1zw9gdh90hl0wc5c0xwl5x7566r611wk73sbqdmpzpswjyyl9aqm"; depends=[clipr]; }; - rdefra = derive2 { name="rdefra"; version="0.3.8"; sha256="00wgcc0mzjvinvj767mzrx8idq8w7b7bi4d82hvldbki9hadjh7d"; depends=[dplyr httr lubridate rgdal sp tibble xml2]; }; + rdecision = derive2 { name="rdecision"; version="1.0.3"; sha256="0dfxlbgmizbnbdwpz9g0gmsydaw8gw8r5l0l0qmplg5a9a02asaw"; depends=[R6 rlang]; }; rdetools = derive2 { name="rdetools"; version="1.0"; sha256="0pkl990viv7ifr7ihgdcsww93sk2wlzp2cg931wywagfp8dijd02"; depends=[]; }; rdflib = derive2 { name="rdflib"; version="0.2.3"; sha256="1hc6a0spmbd42lf7zjkwjv4glagfzsdilv5hm8c76cj36incg6qg"; depends=[dplyr jsonld readr redland stringi tidyr]; }; rdfp = derive2 { name="rdfp"; version="0.1.4"; sha256="1490227hhfjjscfmd8p897v1ijs61pk5sc0a2vr9yjnfmsnxpqrl"; depends=[curl data_table dplyr httr lubridate plyr purrr readr XML xml2]; }; - rdhs = derive2 { name="rdhs"; version="0.7.1"; sha256="1np8d78rwfcylplbjzj4vhd3acganarllabgbiyk6wby04g0qdd7"; depends=[brio digest foreign getPass haven httr iotools jsonlite magrittr qdapRegex R6 rappdirs rgdal storr xml2]; }; + rdhs = derive2 { name="rdhs"; version="0.7.2"; sha256="0n42mz10d5qnwmbrxsacgy31z14wcbg3dpsvhsc3gnicamz822kz"; depends=[brio digest foreign getPass haven httr iotools jsonlite magrittr qdapRegex R6 rappdirs rgdal storr xml2]; }; rdi = derive2 { name="rdi"; version="1.0.0"; sha256="1c49mkxfyxhqz8fc155kgy1k5by0y2c1ahy8k6pn9k8l1j4m4m2q"; depends=[beanplot gplots pdist stringr]; }; rdian = derive2 { name="rdian"; version="0.1.1"; sha256="0i4ljcqhmrwrqbhi321iffypxj4kndx47ssljnixr3fx2lmqh0q1"; depends=[curl httr]; }; rdist = derive2 { name="rdist"; version="0.0.5"; sha256="1jb6dgp1f3307h96v20pjxpkxfz08ij98w0yj5cdx1g2kwfl0h0w"; depends=[Rcpp RcppArmadillo]; }; rdiversity = derive2 { name="rdiversity"; version="2.0"; sha256="1x9500iq9dkqpq79m1fzl2f1c7bbhrq2v0kqz8wx6dd6dlkgkpqn"; depends=[binaryLogic reshape2]; }; rdlocrand = derive2 { name="rdlocrand"; version="0.7.1"; sha256="0qgah3izq9zcqk945ambfm79n5zxb9p9ykpqnsi68d50xyy1qs8k"; depends=[AER sandwich]; }; - rdmulti = derive2 { name="rdmulti"; version="0.6"; sha256="09jk9a4dkzrmibg48qa2m2dd2a5aq18biqck9smxyrwpcibin2n8"; depends=[ggplot2 rdrobust]; }; - rdnb = derive2 { name="rdnb"; version="0.1-3"; sha256="0g85masa1a2c26l12i6ck1hdjvm2saqdlqnwb2p29rm9spmc04qg"; depends=[brew httr stringr xml2]; }; + rdmulti = derive2 { name="rdmulti"; version="0.7"; sha256="112wq692drzd7v4nccjqs22rrx0z5032iyccysmq5gvpb7ahc2im"; depends=[ggplot2 rdrobust]; }; + rdnb = derive2 { name="rdnb"; version="0.1-4"; sha256="069xlfdjjyl4a9clxj8m5gfplmll6qiqzms59mnsql3b74jamxi3"; depends=[brew httr stringr xml2]; }; rdoc = derive2 { name="rdoc"; version="0.1.0"; sha256="0ac6413jyrr7m25z30n3bpiafsvjx38ik6rrjzsiqxrfp41j6l9x"; depends=[cli crayon prettycode R6]; }; rdomains = derive2 { name="rdomains"; version="0.1.9"; sha256="0pfz438qiz8mqh391nlhz2q2r8830y5i0sg1ajhppj1hq2cgqqbg"; depends=[aws_alexa curl devtools glmnet httr jsonlite Matrix rlang urltools virustotal XML xml2]; }; rdoxygen = derive2 { name="rdoxygen"; version="1.0.0"; sha256="16907969w66xvy62k45rw10qfv4x8z6jkkc6i97vppkgnlvf4d4b"; depends=[devtools]; }; rdpower = derive2 { name="rdpower"; version="2.0"; sha256="1yw563nz7dc24ba7vh0w85gp3rhr2ddx3qkpfdr1iwq8a8g1hg01"; depends=[rdrobust]; }; - rdrobust = derive2 { name="rdrobust"; version="0.99.9"; sha256="1sx1mqjk3927kpn0567ia1rch4kmg9zwrc7mgcpds60nbfb8wcl7"; depends=[ggplot2]; }; + rdrobust = derive2 { name="rdrobust"; version="1.0.1"; sha256="0gakdlmqqk9zqyvyyfvwn6xv56hyq44fxayga6kz639r0vznqpsa"; depends=[ggplot2 MASS]; }; rdrop2 = derive2 { name="rdrop2"; version="0.8.2.1"; sha256="02rhcq1vn349ddjkqamxb0wjb3z3m4wzkvin1mprcz4fzrjxgbdr"; depends=[assertive digest dplyr httr jsonlite magrittr purrr]; }; rdryad = derive2 { name="rdryad"; version="1.0.0"; sha256="00f1qwsbwg5jggm5b83nhk1lxyw272rv2kg77bcwqvlf3074c3mz"; depends=[crul curl hoardr jsonlite mime tibble zip]; }; rdtLite = derive2 { name="rdtLite"; version="1.3"; sha256="1njn6x2k03qxmb96d5sl7jz0xq5wabbixn9xy55ypw8g1k0cgmd1"; depends=[curl digest gtools jsonlite knitr provSummarizeR provViz rlang rmarkdown sessioninfo stringi XML]; }; - rdwd = derive2 { name="rdwd"; version="1.4.0"; sha256="0ic1l65baam1qba0z784isnrfx7wg61bmfr883addx9d7bcf76nw"; depends=[berryFunctions pbapply]; }; + rdwd = derive2 { name="rdwd"; version="1.5.0"; sha256="1x63zarcyc1rapg46h0vlym3v2kbd6ql2vza9jqly371p5g8l1ci"; depends=[berryFunctions pbapply]; }; rdwplus = derive2 { name="rdwplus"; version="0.1.0"; sha256="1y4dnm2bb0w6pim4h79mv2km88s78vhsn5fhs7z45m0564hgk0x2"; depends=[raster rgrass7]; }; - reReg = derive2 { name="reReg"; version="1.3.0"; sha256="0nj1zvl3hyh5g1ql9d8afax84dsdfc340j1b74wsknriyx4izzvg"; depends=[BB ggplot2 MASS nleqslv Rcpp RcppArmadillo reda rootSolve scam SQUAREM survival]; }; - reactR = derive2 { name="reactR"; version="0.4.3"; sha256="0wwqyvgvzp6q3zzd4l6s0jz6z7jm3khlcxp0ahhv5xm07z3ygk2w"; depends=[htmltools]; }; + re2 = derive2 { name="re2"; version="0.1.0"; sha256="19nyhs1hx172mgab8dvdb8asryp5qw1qx0khsnwjycyd4skw9mss"; depends=[Rcpp]; }; + reReg = derive2 { name="reReg"; version="1.4.0"; sha256="03i5a4a45a429wdsd69ivi9yww1skwnmazack58q0dfa22hbjq1i"; depends=[BB directlabels ggplot2 MASS nleqslv Rcpp RcppArmadillo reda rootSolve scam SQUAREM survival]; }; + reactR = derive2 { name="reactR"; version="0.4.4"; sha256="15c0ij3xglsdavkpzgnkbyl5yb39jrn6zhlrdjiwp1m9cnrqzf2w"; depends=[htmltools]; }; reactable = derive2 { name="reactable"; version="0.2.3"; sha256="17wl75cblm0rgq3chl96vj7wmbcmszss1zjppfccz1hcimfmlrpx"; depends=[digest htmltools htmlwidgets jsonlite reactR]; }; + reactablefmtr = derive2 { name="reactablefmtr"; version="0.2.0"; sha256="017smx2n3r7xkg5gybwbafn0pdzg4c0vv14adk6imyhgmiklnvl0"; depends=[dplyr htmltools reactable shiny stringr]; }; reactlog = derive2 { name="reactlog"; version="1.1.0"; sha256="0vngy7fixiighhaa0db8xfr6962jmrfn3675qrn3hj7rfh7siagz"; depends=[jsonlite]; }; read_dbc = derive2 { name="read.dbc"; version="1.0.5"; sha256="1vrvxkcrk3iw5am9rsadxzf0wsr7z2mdpa5wb0v9jbhda710b4yf"; depends=[foreign]; }; read_gb = derive2 { name="read.gb"; version="2.0.1"; sha256="049515v9pyxmarzy51m5wpbxdzp7iq5m5m20ilmywfrig7hz8jpl"; depends=[]; }; + read_gt3x = derive2 { name="read.gt3x"; version="1.0.2"; sha256="0i6z5q7iwai0c21xp9krnsy20vwq3c5d1blfbaqi5qfwassnssad"; depends=[R_utils Rcpp]; }; readABF = derive2 { name="readABF"; version="1.0.2"; sha256="1lyjl3j62nrsml9vmgwbach9qm8mh2d2pxjj8sfbkkw79krvdnsd"; depends=[]; }; readBrukerFlexData = derive2 { name="readBrukerFlexData"; version="1.8.5"; sha256="1qmimfxwh6d7s5qrnnk20i2f9l5j1ci3wpfs3qlmggz69jzf589m"; depends=[]; }; readHAC = derive2 { name="readHAC"; version="1.0"; sha256="0z80ai6xfswwgdfh83l9sq279c97n0wz25bk2l7xfb6w0sndzq53"; depends=[]; }; - readJDX = derive2 { name="readJDX"; version="0.5.1"; sha256="1zfi3444s40vvjqdqsalvzk178c7bn6qrn03bnqc8a668labr0kj"; depends=[stringr]; }; + readJDX = derive2 { name="readJDX"; version="0.5.41"; sha256="0cy210sw7y5wvw3fy9m3d6g4vj7gdils6qfdrp2ib2xkqzqxc992"; depends=[stringr]; }; readMLData = derive2 { name="readMLData"; version="0.9-7"; sha256="0l752j1jq37j9pdcsbmcb23b5l8fkfsbisfr3yjy3q4rxsphc7k6"; depends=[XML]; }; readMzXmlData = derive2 { name="readMzXmlData"; version="2.8.1"; sha256="03lnhajj75i3imy95n2npr5qpm4birbli922kphj0w3458nq8g8w"; depends=[base64enc digest XML]; }; readODS = derive2 { name="readODS"; version="1.7.0"; sha256="1hi217ab7hp15jsbzi5ak57cqf8jn2rv78bnn74q72gn9mrfra7n"; depends=[cellranger readr stringi xml2]; }; readOffice = derive2 { name="readOffice"; version="0.2.2"; sha256="0dg7fwxdl41nrjqnxvh9rpz0la99iid0wy51gncjwrh3s85fj2ks"; depends=[magrittr purrr rvest xml2]; }; - readabs = derive2 { name="readabs"; version="0.4.6.900"; sha256="12hhm5cdjh3rmzfq78r274mfxqmkbrdb3lk4c8992iic74a1ylr0"; depends=[curl dplyr fst glue httr hutils purrr readxl rlang rsdmx rvest stringi tidyr xml2]; }; + readabs = derive2 { name="readabs"; version="0.4.8"; sha256="0zvqwjd12b7iz5jldh18lzbrbwsc4is6467jx2xpzi18sd4159kr"; depends=[curl dplyr fst glue httr hutils purrr readxl rlang rsdmx rvest stringi tidyr xml2]; }; readbitmap = derive2 { name="readbitmap"; version="0.1.5"; sha256="14825906l326w59g6apy00j55jg3h5kx2r6s031f4gdkbrc7szbk"; depends=[bmp jpeg png tiff]; }; readbulk = derive2 { name="readbulk"; version="1.1.3"; sha256="0rqz0r5ygwgfqkzv2130sciz3j2p888c2005wsk1m5403syi78an"; depends=[jsonlite plyr]; }; reader = derive2 { name="reader"; version="1.0.6"; sha256="1x489q3ljap4zpny68mx83mgxaqiwlkglcy57whwhnh33dd7qp4h"; depends=[NCmisc]; }; @@ -13666,10 +14215,11 @@ in with self; { readmnist = derive2 { name="readmnist"; version="1.0.6"; sha256="0f2kp5r04k47gpvbj8x13c47zsis3bw3y8f5f37sh6jggblqr004"; depends=[]; }; readobj = derive2 { name="readobj"; version="0.3.2"; sha256="0n25n02f5kn8zv90n2xzdasjnrqisl4n5szb667jw57v40b726cw"; depends=[Rcpp]; }; readr = derive2 { name="readr"; version="1.4.0"; sha256="1fa67h4l9d30ig460xizgzl115i9pm3bk9dvsbrw6awbmf51ic82"; depends=[BH cli clipr cpp11 crayon hms lifecycle R6 rlang tibble]; }; - readrba = derive2 { name="readrba"; version="0.1.0"; sha256="1bf7mnvswdyf62ip6xsl87kmgzz79y29p520spf374y75iclpb50"; depends=[curl dplyr httr lubridate purrr readxl rlang rvest stringr tidyr xml2]; }; + readrba = derive2 { name="readrba"; version="0.1.1"; sha256="1f12rhvggikrphir0liswvxjbdsg2z0qs91acz0qfrk8fap81ddn"; depends=[dplyr httr lubridate purrr readxl rlang rvest stringr tidyr xml2]; }; readroper = derive2 { name="readroper"; version="0.9.3"; sha256="00l731hryx0igj0x7knljs9xq4gaczmsgw2hh05ngrl9y5s528dc"; depends=[readr]; }; readsdmx = derive2 { name="readsdmx"; version="0.3.0"; sha256="188yzkjblbjly032312w0fazj7k7j4ynqfc69xpblnw4gs708sx0"; depends=[Rcpp]; }; - readsdr = derive2 { name="readsdr"; version="0.1.0"; sha256="0qwjndbhpww3xlmppc9lmvmj2w4qd0yihj053fcp7ch81dimyins"; depends=[deSolve dplyr magrittr purrr rlang stringi stringr xml2]; }; + readsdr = derive2 { name="readsdr"; version="0.2.0"; sha256="0s16m1cam69c83k6cdpysdfyqzh0ihyjdwdzv3hqxa9054iv5ifx"; depends=[deSolve dplyr magrittr purrr rlang stringi stringr xml2]; }; + readsparse = derive2 { name="readsparse"; version="0.1.2-1"; sha256="0cqgwz1ark1x20v21sjnwa2w3l2811vi6q0lnc7m7ypqm93vly13"; depends=[Matrix Rcpp]; }; readstata13 = derive2 { name="readstata13"; version="0.9.2"; sha256="02mqwpzn7n3pqjxivnd1vlfc47xkyiywfz594x0f6vd2dym8rdwd"; depends=[Rcpp]; }; readtext = derive2 { name="readtext"; version="0.80"; sha256="0q8ajnp99fwvh14ppkm2z3gqwdwmjrvxvsfb4q7ad0dhkqric05y"; depends=[antiword data_table digest httr jsonlite pdftools readODS readxl streamR stringi striprtf tibble xml2]; }; readtextgrid = derive2 { name="readtextgrid"; version="0.1.1"; sha256="03qrbmlpbjwx4ia0ydv6m9lwzalsas9pdhds82mg5f8ir0cd0qi6"; depends=[magrittr plyr purrr readr stringr tibble]; }; @@ -13677,10 +14227,9 @@ in with self; { readwritesqlite = derive2 { name="readwritesqlite"; version="0.1.2"; sha256="1nnakxj4jsh8wcwzciksa2s1pxjwa407lzmjy4fk82f68ir9jh51"; depends=[chk DBI hms lifecycle RSQLite tibble]; }; readxl = derive2 { name="readxl"; version="1.3.1"; sha256="15mambxr8c7k2ikdfsl1w3vxvm54dsnk0cl1qvks6iig7rql3d14"; depends=[cellranger progress Rcpp tibble]; }; readxlsb = derive2 { name="readxlsb"; version="0.1.4"; sha256="1qnfijspx8zwsmr1i6qb7vgaxazmvshq5mcxn79y0r2spszq419i"; depends=[cellranger Rcpp xml2]; }; - reams = derive2 { name="reams"; version="0.1"; sha256="07hqi0y59kv5lg0nl75xy8n48zw03y5m71zx58aiig94bf3yl95c"; depends=[leaps mgcv]; }; rearrr = derive2 { name="rearrr"; version="0.2.0"; sha256="0vgwmapngfibdfc0xyg93q63iijicay8yfvp3fi0yqjdzr4as1lq"; depends=[checkmate dplyr lifecycle plyr purrr rlang tibble]; }; reasonabletools = derive2 { name="reasonabletools"; version="0.1"; sha256="08i7wy4jic5v9ka7j716lj6p9r55sv46sqrxsy7ad6sgjvrzn0ss"; depends=[]; }; - rebird = derive2 { name="rebird"; version="1.1.0"; sha256="0l1wignhs4hsy0yshr9gh9mwy8h794injkl5f7flkl1m4c39rz8w"; depends=[assertthat dplyr httr jsonlite]; }; + rebird = derive2 { name="rebird"; version="1.2.0"; sha256="0ldjai47ps3wnsd9smcnnabh8fd0abm65k952s9i9s445pwkrcqc"; depends=[assertthat dplyr httr jsonlite]; }; rebmix = derive2 { name="rebmix"; version="2.12.0"; sha256="173b11183hlpazzs70c3zzsg3qakswkvhq63d2bihmy2qbn680zz"; depends=[mvtnorm]; }; rebus = derive2 { name="rebus"; version="0.1-3"; sha256="0ms3dm6g0fq3jycpgjl7q7kyljxc97cczy2jj0lyviwmipdgjg9d"; depends=[rebus_base rebus_datetimes rebus_numbers rebus_unicode]; }; rebus_base = derive2 { name="rebus.base"; version="0.0-3"; sha256="1n2khszcya9k6379bdkq47xi2nw9jngiwj7z8a14wfswqydczv6y"; depends=[]; }; @@ -13690,64 +14239,65 @@ in with self; { recapr = derive2 { name="recapr"; version="0.4.3"; sha256="1ypmjm92mzcmn29cl4zhp1vrgan6sdqqsl3x6dbr4nypfd1dx4f9"; depends=[MASS]; }; recexcavAAR = derive2 { name="recexcavAAR"; version="0.3.0"; sha256="0b91jbgqzkgzvk658ckk639yyz1daa0xql3qgl0kzgqg68d53x20"; depends=[kriging Rcpp]; }; rechonest = derive2 { name="rechonest"; version="1.2"; sha256="0vpff8q5p6in7vjyl62bx3wmksravcg4mpx20qlgy5ia47vyhqp2"; depends=[httr jsonlite RCurl]; }; - recipes = derive2 { name="recipes"; version="0.1.15"; sha256="0xif0ak3w90xmfzlxvb5pnzc3scpfl1pyhrjffi3mq4asvsd52l0"; depends=[dplyr generics glue gower ipred lifecycle lubridate magrittr Matrix purrr rlang tibble tidyr tidyselect timeDate withr]; }; + recipes = derive2 { name="recipes"; version="0.1.16"; sha256="1mayfdbn6q775d4gbdjrrhdbmpsxga57kwh0h7bwv8rk0vmvik23"; depends=[dplyr ellipsis generics glue gower ipred lifecycle lubridate magrittr Matrix purrr rlang tibble tidyr tidyselect timeDate withr]; }; reclin = derive2 { name="reclin"; version="0.1.1"; sha256="15qrdgjmclffivnljgmmipws9ks41fj4q40wnq0fk14mbv2045g2"; depends=[dplyr ldat lpSolve lvec Rcpp stringdist]; }; recluster = derive2 { name="recluster"; version="2.9"; sha256="1nz5w4v5hhb3qjwxixc526gqsmr1imw582l9gj2acwar4z9mixjp"; depends=[ape cluster phangorn phytools picante plotrix vegan]; }; recmap = derive2 { name="recmap"; version="1.0.7"; sha256="14mqc6kzwhcsbnkpl4hy2592rxgwpcpxwawq4x0kakbdjcskbfv8"; depends=[GA Rcpp sp]; }; recoder = derive2 { name="recoder"; version="0.1"; sha256="0wh0lqp7hfd4lx2xnmszv1m932ax87k810aqxdb6liwbmvwqnfgd"; depends=[stringr]; }; recombinator = derive2 { name="recombinator"; version="1.0.1"; sha256="1dbsqig2jjp3zypcqxf9c2brb09pv6xikmh6fhz5vgxy5wkyivks"; depends=[crayon]; }; - recommenderlab = derive2 { name="recommenderlab"; version="0.2-6"; sha256="19v3f0iggvwdmi8jw2k50w9b68wnzvdcwi0d727aqlhp3w760hfj"; depends=[arules irlba Matrix proxy recosystem registry]; }; + recommenderlab = derive2 { name="recommenderlab"; version="0.2-7"; sha256="016wgzf7hl0kw9qdwc8jwbnq4pkjkid33whh42h10hq8zqsbnivk"; depends=[arules irlba Matrix proxy recosystem registry]; }; recommenderlabBX = derive2 { name="recommenderlabBX"; version="0.1-1"; sha256="042yh0h8qxj7n9hysrfdxnpb3g0zb6s5b683s7hn5mjc55q7nn4g"; depends=[recommenderlab]; }; recommenderlabJester = derive2 { name="recommenderlabJester"; version="0.1-2"; sha256="0kr9xc2gih2myn1a8h8dxxmdhibv1sjwjsvlrj9d5hvd1mgfhks5"; depends=[recommenderlab]; }; reconstructKM = derive2 { name="reconstructKM"; version="0.3.0"; sha256="0fxdmvkm68g114nx2r2r8gy2lwqc5wkfcls7fpdfdfg0aazqqxwq"; depends=[dplyr magrittr rlang survival survminer]; }; reconstructr = derive2 { name="reconstructr"; version="2.0.2"; sha256="0pzpd2l1b6y1b1lnd95lpc5s8niz7p56vkmxgyi6g6b25vh9c2vi"; depends=[openssl Rcpp]; }; recorder = derive2 { name="recorder"; version="0.8.2"; sha256="1j3fqqp5vi8z3hxqgb887v9r8x0cl5jikiyx3c7arwna7k89215a"; depends=[crayon data_table]; }; - recosystem = derive2 { name="recosystem"; version="0.4.3"; sha256="122z5vd9yrbysyf4akkk9kfm0mcqv97g7zrp66mg47fkz8v6ak20"; depends=[Rcpp RcppProgress]; }; + recosystem = derive2 { name="recosystem"; version="0.4.4"; sha256="0jnq6y5cgfgjvni70ms68z7lfa296jahk4zzby2d69v5ir7vy6xg"; depends=[Rcpp RcppProgress]; }; recurse = derive2 { name="recurse"; version="1.1.2"; sha256="0bdm2nd8cq64dwz9b2hnbjv6c3fwpy7gnmbfi6p49nf285p8y632"; depends=[Rcpp]; }; red = derive2 { name="red"; version="1.5.0"; sha256="0hsmzw3cc3kkiaqhbn0p2fm6biqq0ka9rmv6gcv74nxjzlvl6vvp"; depends=[BAT dismo gdistance geosphere jsonlite maptools raster rgdal rgeos sp]; }; redR = derive2 { name="redR"; version="1.0.1"; sha256="0bd1jzjip6p449m9ysi4kybxqljh2wj8z9mrgyk1cy08bjivd1cd"; depends=[imager]; }; - reda = derive2 { name="reda"; version="0.5.2"; sha256="0anaxiskqq0lmdjaa8ac3nh772gwl6iwwzawdqpaiv571wj10s5h"; depends=[ggplot2 Rcpp RcppArmadillo splines2]; }; + reda = derive2 { name="reda"; version="0.5.3"; sha256="0mns6bnbzngbhsjcyfb2xgia1747axdz4pf7nkpkmxrchijv2q5h"; depends=[ggplot2 Rcpp RcppArmadillo splines2]; }; redcapAPI = derive2 { name="redcapAPI"; version="2.3"; sha256="1myycwdrlw1405fxc82zd8ps8bhdvf2ffsb91pia5ijf6952v8pf"; depends=[checkmate chron DBI httr labelVector lubridate readr stringr tidyr]; }; reddPrec = derive2 { name="reddPrec"; version="0.4.0"; sha256="0zmkaiivvjq8mcaz310zgjjc7y0wgsqv29bf8nhli5qawaczvb9a"; depends=[fields snowfall]; }; - redist = derive2 { name="redist"; version="2.0.2"; sha256="0qmhywm8yqa9myrm8h4w96nr5hdp13njca5mi3dg3fx5l6l74wz3"; depends=[BH coda doParallel dplyr foreach ggplot2 lwgeom magrittr Rcpp RcppArmadillo RcppEigen readr servr sf sp spdep stringr sys tibble]; }; redland = derive2 { name="redland"; version="1.0.17-14"; sha256="1fd79clxkn85ywvdsyy0j6mw057ir9202qw2962j8iqbvqai99qk"; depends=[roxygen2]; }; redlistr = derive2 { name="redlistr"; version="1.0.3"; sha256="003jxfmj1gryw77vnrvaxmpvjbshlq53wgcrj02mcywfcqzg4jcr"; depends=[plyr raster rgeos sp]; }; + redoc = derive2 { name="redoc"; version="2.0.0.49"; sha256="06nfqw6xs0ij21mjbqk9sdvhhh0pqf6fwankvagsbyrv742g7qkx"; depends=[jsonlite]; }; redux = derive2 { name="redux"; version="1.1.0"; sha256="0a551w7fph338mqzxda6y21lsad19dway7w18jw9cv1rgvcp9nvc"; depends=[R6 storr]; }; ref_ICAR = derive2 { name="ref.ICAR"; version="1.0"; sha256="0k6czsbjclgmi7vp5hl50jghkzm573s50993iz3dcv55mv662251"; depends=[coda MCMCglmm mvtnorm Rdpack rgdal spdep]; }; referenceIntervals = derive2 { name="referenceIntervals"; version="1.2.0"; sha256="0wf8c71z7gq2f91q60dyy7mrxsnhq7x3wdllmzn2lpabgv2wrm85"; depends=[boot car extremevalues outliers]; }; refinr = derive2 { name="refinr"; version="0.3.1"; sha256="0q76sr050pg3ahwzcxj08mjig0k2jq8yh7nv6d914pwg3dhq05sn"; depends=[Rcpp stringdist stringi]; }; + refitME = derive2 { name="refitME"; version="1.2.0"; sha256="062dgdzxjlbq9dcyks3pp5xnwp9pwk9zgd52ldjcnjllp29wzcaw"; depends=[caret dplyr expm MASS mgcv mvtnorm sandwich SemiPar VGAM VGAMdata]; }; refnr = derive2 { name="refnr"; version="0.1.0"; sha256="1gjjzxpyxm1kf1pqk99bd7f2j85rzmww3r1268bccivf19rs881i"; depends=[]; }; refset = derive2 { name="refset"; version="0.1.1"; sha256="1xbwvm9066g3f7pd34z5jh04vph4ddy2lkcgmf4kiwa1k5czpwg1"; depends=[]; }; - refuge = derive2 { name="refuge"; version="0.3.2"; sha256="0ksznc72yvcscviqq6iysjkbkklqxff04q0rsh2l8gyy7g7m9415"; depends=[dplyr httr jsonlite tibble]; }; + refuge = derive2 { name="refuge"; version="0.3.3"; sha256="0cq62rgawlam4j4h4sz4zvkgi0x21k4syy4vh7i40bxrq0z9ysyz"; depends=[dplyr httr jsonlite tibble]; }; refund = derive2 { name="refund"; version="0.1-23"; sha256="1vax9dqaypjs7hdbdwadr7i275wqij115fdv81cjz3rfm8s9qiks"; depends=[boot fda gamm4 ggplot2 grpreg lattice lme4 magic MASS Matrix mgcv nlme pbs RLRsim]; }; regRSM = derive2 { name="regRSM"; version="0.5"; sha256="0nbp3yjk9r7qvwm7wla39155rmqnvpdb720iq3b0hcy1bbsxbk9s"; depends=[doParallel foreach Rmpi]; }; regclass = derive2 { name="regclass"; version="1.6"; sha256="0m974k3yhf0dgv5f1qjs8c53mam0cll3cjn35ywfrmlfla0wlhf5"; depends=[bestglm leaps randomForest rpart rpart_plot VGAM]; }; regexPipes = derive2 { name="regexPipes"; version="0.0.1"; sha256="1hk0rhvmgzcyf5cyl8hjznl3ll25kpasqikfr6nxd6ian2slvmmb"; depends=[]; }; regexSelect = derive2 { name="regexSelect"; version="1.0.0"; sha256="0xnb9qa8l63ang4r40ky4qhlrs5mbzvmj98dgij26j3mq1ys1pa7"; depends=[shiny shinyjs]; }; regexTestR = derive2 { name="regexTestR"; version="0.1.0"; sha256="1nfzzifqvhz3cjdr93pd4iyz5hb8v42v94r89b2ikc8ycc48k75g"; depends=[config data_table DT golem htmltools pkgload processx purrr RColorBrewer rvest shiny shinyBS shinythemes stringr tidyr xml2]; }; - reghelper = derive2 { name="reghelper"; version="1.0.1"; sha256="16q3f1my5r2s7v4l7mpql86vmsw6w364zn8g97ccp2brqlpzfhd5"; depends=[ggplot2 lme4 nlme]; }; + reghelper = derive2 { name="reghelper"; version="1.0.2"; sha256="1ya15ksn30ad6lx10xr9vhncvm72j5qz82hwg6avdm8h6xi16bqp"; depends=[ggplot2 lme4 nlme]; }; + regioncode = derive2 { name="regioncode"; version="0.1.0"; sha256="1yq3z02m5wzb7sp176vm60xzh8j2hg64qfwm6k48rwmby9cggwyk"; depends=[dplyr knitr textshaping]; }; regions = derive2 { name="regions"; version="0.1.5"; sha256="007pgqyphl5nq0ym1bgz89li2pnps2kcfn7h8jkvpi36pmig5zpn"; depends=[countrycode dplyr glue magrittr purrr readxl rlang stringr testthat tidyr tidyselect]; }; registr = derive2 { name="registr"; version="1.0.0"; sha256="1ysj2ab69w6g71d1kpcwyq0py71w6h7lfhk4nzgn2dhh6k8whwbn"; depends=[dplyr ggplot2 gridExtra magrittr Rcpp RcppArmadillo tidyr]; }; registry = derive2 { name="registry"; version="0.5-1"; sha256="1k3j6dx350awamr0dwwgkhfs46vsnj4nf08iw5byq0x7n3nkdsnz"; depends=[]; }; reglogit = derive2 { name="reglogit"; version="1.2-6"; sha256="1nnn8n5sqhbd3nzmwnpmcsmaxxxaqwbna7xm7q9vk4cqz9cm9b9s"; depends=[boot Matrix mvtnorm]; }; - regmed = derive2 { name="regmed"; version="1.1.0"; sha256="17s6q36l5jnp1klpw7qb4ab80zhc31jfccr96sy2vx6qx9rr9zw9"; depends=[glasso knitr Rcpp RcppArmadillo]; }; + regmed = derive2 { name="regmed"; version="2.0.4"; sha256="19cc0nx4463jny9cw5smb95crb3makspysfx06h82amhyqjyzw60"; depends=[glasso igraph knitr lavaan Rcpp RcppArmadillo]; }; regmedint = derive2 { name="regmedint"; version="0.2.0"; sha256="1l9f6biqjc59lpcvmmvg5rikcqs0liaj0y3ivqgv3wldq0yzl5pg"; depends=[assertthat Deriv MASS Matrix sandwich survival]; }; regnet = derive2 { name="regnet"; version="0.4.0"; sha256="0qb7sp464fyxn0bslkapjni3pzk7l6fdgabfbzja08flsr63r4mh"; depends=[glmnet Rcpp RcppArmadillo]; }; regplot = derive2 { name="regplot"; version="1.1"; sha256="048w0hnd2y8k27msjhw2g4ygck6i09698qk24sz7563z82gvj52w"; depends=[beanplot lme4 sm survival vioplot]; }; regpro = derive2 { name="regpro"; version="0.1.1"; sha256="02axbq63hsqwg3q2ixr0lpsdai9q6wj57s5k1343q9m0pw90vr73"; depends=[denpro]; }; regrap = derive2 { name="regrap"; version="1.0.1"; sha256="0yrxhlam7jmxwk1v53kllv6ja1m938symfvqp84xb278r3wb1wv7"; depends=[mvtnorm]; }; regress = derive2 { name="regress"; version="1.3-21"; sha256="0mkf1dyg0r09ifdvmc3g6b0q0h819j0kfh1cb33r1vsr8yfjvgbz"; depends=[]; }; - regressoR = derive2 { name="regressoR"; version="1.1.9"; sha256="021ld511hazlqycgp5jyrcdabk5m5n6m4jx85h91agnrm7j2n9lm"; depends=[colourpicker corrplot dplyr DT e1071 flexdashboard gbm ggplot2 glmnet htmltools kknn neuralnet pls randomForest rattle ROCR rpart shiny shinyAce shinydashboardPlus shinyjs shinyWidgets xgboost zip]; }; + regressoR = derive2 { name="regressoR"; version="1.2.1"; sha256="0mqwk2jsnmgjqrq37zj5491pa6in4rys347fj1d4pf844vvwyylc"; depends=[corrplot dplyr e1071 flexdashboard forcats gbm ggplot2 glmnet htmltools kknn neuralnet rattle rpart rpart_plot shiny shinyAce shinydashboardPlus shinyWidgets stringr xtable]; }; regrrr = derive2 { name="regrrr"; version="0.1.1"; sha256="1ibmfxw0akkrz4r0fipfqbbw4153cghj8k2xsy73lgw799ybylfk"; depends=[dplyr ggplot2 lspline magrittr MuMIn purrr robustbase scales stringr tidyr usdm]; }; regsem = derive2 { name="regsem"; version="1.6.2"; sha256="14nrzyrkrijdrr4jwkri5zra2wh36w68wy6xs600l2z1633h2lmn"; depends=[lavaan Rcpp RcppArmadillo Rsolnp]; }; regspec = derive2 { name="regspec"; version="2.4"; sha256="18i6k2wqaddrc0dz7v8x3s9205dcfwanqhpnxa9hkpyqzbb17pd3"; depends=[]; }; regsubseq = derive2 { name="regsubseq"; version="0.12"; sha256="0879r4r8kpr8jd6a3fa9cifm7cv0sqzz8z1alkm1b2fr1625md3g"; depends=[]; }; - regtest = derive2 { name="regtest"; version="0.05"; sha256="1wrrpp2hvkas0yc512gya3pvd0v97pn4v51k5jxkwyd1pp68zd1q"; depends=[]; }; + regtomean = derive2 { name="regtomean"; version="1.0"; sha256="1w5i75iwwc2w2nzw9yap86njhq9jz0pc9cn39ivxdam4a9693jjz"; depends=[effsize formattable mefa plotrix plyr sjlabelled sjmisc sjPlot]; }; regtools = derive2 { name="regtools"; version="1.1.0"; sha256="1kia4h4bwjjfq7jm57ihdgspbqfn683ssbzngp5r069ki931h3nb"; depends=[dummies FNN mvtnorm sandwich]; }; rehh = derive2 { name="rehh"; version="3.2.1"; sha256="10187p0qyqxplj5kh1ngnc56ajhfl2fgszs9qghfc43f7m00qwsh"; depends=[rehh_data]; }; rehh_data = derive2 { name="rehh.data"; version="1.0.0"; sha256="1jkvwmnnmfa7iyvrabgcfzw3vfzx0dlgq47s6yf4zayi437v4di0"; depends=[]; }; rehydratoR = derive2 { name="rehydratoR"; version="0.5.2"; sha256="1d94m9hv1l72l9lph2vzbq4qqbfcgyhv2qk82p9vb8l2ckavjzvv"; depends=[dplyr jsonlite rtweet tibble]; }; - reinforcelearn = derive2 { name="reinforcelearn"; version="0.2.1"; sha256="176z2q69p24i29a8sh19xxn2zl3h1z2ixdssr5i6m4yvkvdrvv3b"; depends=[checkmate nnet purrr R6]; }; reinstallr = derive2 { name="reinstallr"; version="0.1.4"; sha256="1fcmy2cyqy4zwh815j2jbmziaiq6kypwsnj5bx0f10dlq3522m5q"; depends=[]; }; reinsureR = derive2 { name="reinsureR"; version="0.1.0"; sha256="19ayikzcq6z4i7xrlby76yy2nwvrsv6xdfrmvzyr7rz934flh8kd"; depends=[data_table dplyr ggplot2 viridis viridisLite]; }; rel = derive2 { name="rel"; version="1.4.2"; sha256="0h0146b8pnd7ai17y58agsk9kaym7fhiagl34gggaak0j1qa32wh"; depends=[]; }; @@ -13761,6 +14311,7 @@ in with self; { relaxo = derive2 { name="relaxo"; version="0.1-2"; sha256="1rzmq7q3j271s6qwwrmwidv0vxcjpgjhyiqgr6fkczkai2lbnd8x"; depends=[lars]; }; reldist = derive2 { name="reldist"; version="1.6-6"; sha256="09vips7spcz0fahrpy0bl15hk43zgnq74h189hmygyi41l95aywa"; depends=[Hmisc mgcv]; }; relen = derive2 { name="relen"; version="1.0.1"; sha256="0br7c3j30a1yc61pyinmk5lvk8zw9rivd0z2096g6crgmbzix8ml"; depends=[]; }; + relevance = derive2 { name="relevance"; version="1.1"; sha256="05s6dpi5f9gdds0lk16i67cd6sahi7p2k2xcp9916r3wdqmsp29d"; depends=[]; }; relevent = derive2 { name="relevent"; version="1.0-4"; sha256="10bf1s7jmas8ck1izqibqcaqg4z55ciwdpd9pm2697y8z0jhr2rj"; depends=[coda sna trust]; }; relgam = derive2 { name="relgam"; version="1.0"; sha256="0bfsk2pc3vdk8wgdfpz80x0f9p0z37sq114swqn6z11p298hwf2x"; depends=[foreach glmnet]; }; reliaR = derive2 { name="reliaR"; version="0.01"; sha256="000nafjp386nzd0n57hshmjzippiha6s6c4nfrcwl059dzmi088i"; depends=[]; }; @@ -13768,47 +14319,50 @@ in with self; { relimp = derive2 { name="relimp"; version="1.0-5"; sha256="0ydn82g8xdqzhf34187080bbpcpw1zdjbj2i3dv1d6d35vvprb5c"; depends=[]; }; relsurv = derive2 { name="relsurv"; version="2.2-3"; sha256="0jiky939n8vi44n8xg9kag67xjvf1dpywyjrn4bpdfrvfmkrr0l9"; depends=[date survival]; }; rem = derive2 { name="rem"; version="1.3.1"; sha256="1q4p26irhhl1lvc0ydv9wmng1y635zm16szpl7gwq1kyn2p90rai"; depends=[doParallel foreach Rcpp]; }; - remMap = derive2 { name="remMap"; version="0.2-0"; sha256="1k2niiaq2lr4inrx443clff9cqqvyiiwd45k7yqjd8ixnbaa3mrk"; depends=[]; }; + remap = derive2 { name="remap"; version="0.2.1"; sha256="0fvi0scrjcghkfamdilfyqqn0v9zlgpjdkqwk4ylhpb85x5pv534"; depends=[sf units]; }; rematch = derive2 { name="rematch"; version="1.0.1"; sha256="0y3mshvpvz9csmq8hk8jbabx4nxlv5sckvfzvm6920ndg34xw2d4"; depends=[]; }; rematch2 = derive2 { name="rematch2"; version="2.1.2"; sha256="1fzpz8vhghw8ygwg6rsvfy3783pqk7ch029i5851lwypkplvz77y"; depends=[tibble]; }; remedy = derive2 { name="remedy"; version="0.1.0"; sha256="1lsa5az9jwy4ngjmfzcb7qj4wm8phsgajlnp5kwa4nav0g1dhb4s"; depends=[knitr rematch2 rstudioapi]; }; remindR = derive2 { name="remindR"; version="0.0.1"; sha256="0b27v2qm3z8l9vcng8f0rkphjidxkw5n017ysflx180qjizqq632"; depends=[assertthat]; }; remote = derive2 { name="remote"; version="1.2.1"; sha256="1ihzjxbvas7396cwsi9am4pl94naxa9dnhbnh8k0l5p4a50mk33w"; depends=[gridExtra latticeExtra mapdata raster Rcpp scales]; }; remoter = derive2 { name="remoter"; version="0.4-0"; sha256="1a7m63l8phv5jnazvdqdrqkaqjwqzaac5y4jm2jn0ypy4n8jvkfl"; depends=[argon2 getPass pbdZMQ png]; }; - remotes = derive2 { name="remotes"; version="2.2.0"; sha256="1f1kdw9j1wald3fs8b3n68x1kljy07j60g3aw1aarx26ikyk9whj"; depends=[]; }; - remss = derive2 { name="remss"; version="1.0.0"; sha256="0dl7iqg65qgafq7s1srcymqzvplkpzplpn6g68lb1mqirqzvgpqw"; depends=[survival]; }; + remotes = derive2 { name="remotes"; version="2.3.0"; sha256="0f35648bdxhvplcfj80r4hfj5w21f1s01kcz6b29d098c1mnfzb7"; depends=[]; }; + remss = derive2 { name="remss"; version="1.0.1"; sha256="15s3qvcfyp1880ddzpvgiw3q5av21052iy1vnpw0hib5pb7xfkfb"; depends=[survival]; }; renpow = derive2 { name="renpow"; version="0.1-1"; sha256="0kbfpzr17fvf5zzxpzdhvfmrqmlkba2w3rzxl5q5ac1w3h75gfhc"; depends=[]; }; rentrez = derive2 { name="rentrez"; version="1.2.3"; sha256="0x1g2f6hvkqqlb39z8m5qxhcvsizddic5i7rpqw0wy77xfbna9gv"; depends=[httr jsonlite XML]; }; - renv = derive2 { name="renv"; version="0.12.3"; sha256="0k31x19gzpffb701c76p840cip10c0dh8yv3wcs30gqi0ag1g77l"; depends=[]; }; + renv = derive2 { name="renv"; version="0.13.2"; sha256="0jlsf6vfvqhr4i35xy3xf1ixkfillivzy3wbpl6ca9vyjpnhiwj1"; depends=[]; }; repeated = derive2 { name="repeated"; version="1.1.2"; sha256="19kcsj96i1zpnwfan3gz5vrzc2gqlah0wrdr9vb4vvacz45wcdfq"; depends=[rmutil]; }; repec = derive2 { name="repec"; version="0.1.0"; sha256="0alr9fbmfxmnnnn1qymy65crcycynwz435jj0vangbb4p0qhv8pm"; depends=[jsonlite]; }; - repello = derive2 { name="repello"; version="1.0.0"; sha256="0mn6dbv582akw5mkbznjmfn8prdd4r9wkm4c4d2amnssmv7554nx"; depends=[dplyr httr stringr]; }; + repello = derive2 { name="repello"; version="1.0.1"; sha256="118m0vybgf5ys856zivn7gvjxqq163gkrhrpyl1avylib4bp3mcq"; depends=[dplyr httr stringr]; }; repfdr = derive2 { name="repfdr"; version="1.2.3"; sha256="0jpk44arg1jib0h2w90h851bs5cd1ss32fab9bfvf9iir2jk8985"; depends=[Rcpp]; }; replicateBE = derive2 { name="replicateBE"; version="1.0.15"; sha256="0al23s1mb3l7z3jypan3v34bs09hlspjxwb672na6p60nmz2mfm5"; depends=[lmerTest nlme pbkrtest PowerTOST readxl]; }; - replicatedpp2w = derive2 { name="replicatedpp2w"; version="0.1-2"; sha256="0nskwkqm9z2aphpim6pvykhc3fphlsbap3r49nghkwjpngd0qzj8"; depends=[spatstat spatstat_utils]; }; + replicatedpp2w = derive2 { name="replicatedpp2w"; version="0.1-3"; sha256="1h680xn403fm98ywyxqwhq7llsaghgd4ffjq7r5bdb1r9ahvxrv0"; depends=[spatstat spatstat_core spatstat_geom spatstat_utils]; }; replicationInterval = derive2 { name="replicationInterval"; version="2.0.1"; sha256="1jyvyqr8r2fs1cmbz7zjcc8p116bnkslvx27pqi92y5pxgqvsqvr"; depends=[ggplot2 MASS MBESS pbapply]; }; repmis = derive2 { name="repmis"; version="0.5"; sha256="0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5"; depends=[data_table digest httr plyr R_cache]; }; + repmod = derive2 { name="repmod"; version="0.1.7"; sha256="1rpmvxfw2m3bisi5g90sdfm8wmwg2gv9rzblq9kl70kvrs8pj1qs"; depends=[boot flextable lme4 lmerTest officer xtable]; }; repo = derive2 { name="repo"; version="2.1.5"; sha256="13gdka37kbs4mp16pf65bh28f0dkyalrcrdik6lc67jw8r9h94f9"; depends=[digest]; }; repolr = derive2 { name="repolr"; version="3.4"; sha256="13kmy09c7lk8p1mkdss0krcsfb6d7zcnqpwnl38zkanvh8q3fqhm"; depends=[Matrix Rcpp RcppArmadillo]; }; + report = derive2 { name="report"; version="0.3.0"; sha256="0pw2rrhvwbgsg91vq9wffdyhlkzcbg2c2ggbjzy2hpb6igir5fzh"; depends=[bayestestR effectsize insight parameters performance]; }; reportROC = derive2 { name="reportROC"; version="3.5"; sha256="1f3vdxz45bhks1pm3b41pmh8g8vr2czfr1pn4ddy4kgw5h1x3n8n"; depends=[pROC]; }; reportReg = derive2 { name="reportReg"; version="0.3.0"; sha256="0qwrpn61x69hmgln5fpc58dqfa3pba0lgjjyj0f3fh96wc9jyhq1"; depends=[nlme]; }; - reporter = derive2 { name="reporter"; version="1.0.6"; sha256="0m4kix8s02csgxf85bk1q6bpi2p7rdrbv49ypwcf6fi644x11rs8"; depends=[crayon fmtr stringi]; }; + reporter = derive2 { name="reporter"; version="1.1.2"; sha256="0aablfp4r9452aigkldg439ln0g69k3awm76h7llkqq990cc7zcx"; depends=[crayon fmtr stringi]; }; + reportfactory = derive2 { name="reportfactory"; version="0.3.0"; sha256="1xyfvbzfiqp91z4rxhys511h07dk20b1hla1n5fv1ygy50g8nwm6"; depends=[callr checkpoint fs rmarkdown rprojroot rstudioapi yaml]; }; reportr = derive2 { name="reportr"; version="1.3.0"; sha256="0zynplxqvbmf23cm2rsz3wz2jx6mv55z94mn1k44ny3lx625cnpw"; depends=[ore]; }; reporttools = derive2 { name="reporttools"; version="1.1.2"; sha256="1i87xmp7zchcb8w8g7nypid06l2439qyrvpwsjz6qny954w6fa2b"; depends=[xtable]; }; - repr = derive2 { name="repr"; version="1.1.0"; sha256="15jz780w4nd9qjd1g3gq8f5lkh60p2v3ig3hm5kl1rg3z4cf0gvl"; depends=[base64enc htmltools jsonlite pillar]; }; + repr = derive2 { name="repr"; version="1.1.3"; sha256="0qimllv9pn8wsl550bjkp5dkknbmr69j85mrwfbbq75m2ga466sk"; depends=[base64enc htmltools jsonlite pillar]; }; represent = derive2 { name="represent"; version="1.0"; sha256="0jvb40i6r1bh9ysfqwsj7s1g933d7z5fq9d618yjrqr6hbbqsvac"; depends=[]; }; representr = derive2 { name="representr"; version="0.1.1"; sha256="0ni8kw6bklphflrnynmsbjzx2zr4nc20qqhiivn7dyny95ij2m85"; depends=[doParallel dplyr foreach]; }; represtools = derive2 { name="represtools"; version="0.1.3"; sha256="00hnvzkkcl9d3k115i5l9gs0wah5d11amn7q62m1j158lkqlcfza"; depends=[whisker]; }; - reprex = derive2 { name="reprex"; version="0.3.0"; sha256="0v7vxzs8alwz8y1cjicpimp5yimf1g9gb8x5wy3zhvrz6kk2lg10"; depends=[callr clipr fs rlang rmarkdown whisker withr]; }; - reproducer = derive2 { name="reproducer"; version="0.4.0"; sha256="1hyfx9ynq0xw4mm36alm1dq8vgdpayfncdnlphy7d46sghwzzbsc"; depends=[dplyr GetoptLong ggplot2 gridExtra httr jsonlite lme4 MASS metafor openxlsx readr reshape stringr tibble tidyr xtable]; }; - reproducible = derive2 { name="reproducible"; version="1.2.4"; sha256="0jgi28s8bd03cn30ivzjxcmkbmk2kx9gr2ysw8zkqwd0lvpxw985"; depends=[data_table DBI digest fpCompare glue magrittr raster Require rlang RSQLite sp]; }; + reprex = derive2 { name="reprex"; version="2.0.0"; sha256="1lcnxczy28n4g3rvph09va7svcznfyqa7zdggklqb924qvy7flwh"; depends=[callr cli clipr fs glue knitr rlang rmarkdown rstudioapi withr]; }; + reproducer = derive2 { name="reproducer"; version="0.4.2"; sha256="0ip7zh8jnjdwl0lawh60v1rcl0dvrxb6dbrlldb6l1vzbn530him"; depends=[dplyr GetoptLong ggplot2 gridExtra httr jsonlite lme4 MASS metafor openxlsx readr reshape stringr tibble tidyr xtable]; }; + reproducible = derive2 { name="reproducible"; version="1.2.6"; sha256="0lvicjaqlzqmjiichcq7dy4008h9vxxscrhg57jsvq8jvrz2rp7p"; depends=[data_table DBI digest fpCompare glue magrittr raster Require rlang RSQLite sp]; }; reproj = derive2 { name="reproj"; version="0.4.2"; sha256="0lxd1vsxcf0r96jkl5jrh3kyklf90wcs4a27cs6ck93x1cxjnnni"; depends=[crsmeta PROJ proj4]; }; repurrrsive = derive2 { name="repurrrsive"; version="1.0.0"; sha256="1nmy88h2bfv2bad282kbrmnkjx9d8klgzv4mm8nspm049s09ydmz"; depends=[tibble]; }; reqres = derive2 { name="reqres"; version="0.2.3"; sha256="0dly09h8dpjlmvrd1wfg1gqcqhm03ax97qr0nd1p0fg9y0pdapya"; depends=[assertthat brotli jsonlite R6 stringi urltools webutils xml2]; }; request = derive2 { name="request"; version="0.1.0"; sha256="1q7zd6q00gdqmgq7s7nq1ixmns8zn2amr5zah9rwnsn8dkllj9yh"; depends=[curl httr jsonlite lazyeval magrittr R6 whisker]; }; requireR = derive2 { name="requireR"; version="1.0.0.1"; sha256="192l7i3q7s2a6n737an3fn258agjsdzh0q2w0vc8jbz7v4f3i92d"; depends=[]; }; - rerddap = derive2 { name="rerddap"; version="0.7.0"; sha256="0dszvpxg1mmvcwki194nijzd8xbs910syplf993zgx9idcn0lz2n"; depends=[crul data_table digest dplyr hoardr jsonlite ncdf4 tibble xml2]; }; - rerddapXtracto = derive2 { name="rerddapXtracto"; version="1.0.2"; sha256="0jbkaq6wd4k0j3x2jmkd0v0c1lgn3b6b27m0pbvhhi2k24wqwbcx"; depends=[abind dplyr ggplot2 httr maps ncdf4 parsedate plotdap readr rerddap sf sp]; }; + rerddap = derive2 { name="rerddap"; version="0.7.4"; sha256="0632nips935kkgbmw7xhsj1692jv344la1vvxlgmi1gh8jc643iq"; depends=[crul data_table digest dplyr hoardr jsonlite ncdf4 tibble xml2]; }; + rerddapXtracto = derive2 { name="rerddapXtracto"; version="1.1.0"; sha256="1121p6i1fnbbzl9xyfjh7g4a1hdp0042gyx80rrda1qb6ggkavs2"; depends=[abind dplyr ggplot2 httr maps ncdf4 parsedate plotdap readr rerddap sf sp]; }; resample = derive2 { name="resample"; version="0.4"; sha256="1rckzm2p0rkf42isc47x72j17xqrg8b7jpc440kn24mqw4szgmgh"; depends=[]; }; resampledata = derive2 { name="resampledata"; version="0.3.1"; sha256="1nxjqvxxvycccmh1n7lpc4k8zmwnciicfr5rzfid1icij5fzw3ak"; depends=[]; }; rescue = derive2 { name="rescue"; version="1.0.3"; sha256="0wq4ka1a7yhbjwr99ngykhn2r3czn3rqi63r6jn46pz15vnicwad"; depends=[data_table dbscan igraph irlba Matrix reticulate]; }; @@ -13817,17 +14371,17 @@ in with self; { reshape = derive2 { name="reshape"; version="0.8.8"; sha256="0s6i0sqxg1vldxs6miv8mi0zydxbqzgpmzfiwkj8y7jix3yrfmad"; depends=[plyr]; }; reshape2 = derive2 { name="reshape2"; version="1.4.4"; sha256="1n0jrajpvc8hjkh9z4g8bwq63qy5vy5cgl2pzjardyih4ngcz3fq"; depends=[plyr Rcpp stringr]; }; resourcer = derive2 { name="resourcer"; version="1.1.0"; sha256="1mdmwi0yfvsjsny2amwk34ry6vmaw3kqf2l39w49bd7yi4n2hjxr"; depends=[httr R6]; }; - respirometry = derive2 { name="respirometry"; version="1.2.1"; sha256="1lhgynij6akn5fkrl5112avhj0w3p9qmbgww7xvawp8hyk16f1x2"; depends=[birk lubridate marelac measurements minpack_lm PKNCA seacarb segmented]; }; - restatapi = derive2 { name="restatapi"; version="0.8.10"; sha256="0sczzxnzwlgb6jyby0x05kips1svsapj4qzflswd94n811fwrz21"; depends=[data_table rjson xml2]; }; + respirometry = derive2 { name="respirometry"; version="1.3.0"; sha256="1ffhkvf8a8zhkysghd636k47bl7k5bdwkkg4m0pr1zlxpfrif82c"; depends=[birk lubridate marelac measurements minpack_lm PKNCA seacarb segmented]; }; + restatapi = derive2 { name="restatapi"; version="0.10.3"; sha256="0w57ilmdxvkvzirwb87xbnsd70dvsn3gnk3g1rrv4cs14ycvl6f1"; depends=[data_table rjson xml2]; }; restaurant = derive2 { name="restaurant"; version="0.1.0"; sha256="1dr9nw5xkll1wnra2xi8dg2yiv85nibdg1i9lsn44v7cgr9vb32j"; depends=[]; }; restfulr = derive2 { name="restfulr"; version="0.0.13"; sha256="1dk45mzrr6ka92yjz7hfhkj12kpx1wg4szv1h1mg80mgga4ganbv"; depends=[RCurl rjson S4Vectors XML yaml]; }; restimizeapi = derive2 { name="restimizeapi"; version="1.0.0"; sha256="1ss6fng5pmqg6cafc256g9ddz8f660c68ysxfan6mn4gdaigz7lb"; depends=[RCurl RJSONIO]; }; restorepoint = derive2 { name="restorepoint"; version="0.2"; sha256="0pjp5dvycvfg75hhj8lrr2lrjn6n6bqj0ziwyd87lyi15b9j8w4s"; depends=[]; }; restrictedMVN = derive2 { name="restrictedMVN"; version="1.0"; sha256="0qynkg244gzq0yjb0716w7g1sxdq66i11ss8jij86h2mz3ykj137"; depends=[MASS]; }; restriktor = derive2 { name="restriktor"; version="0.2-800"; sha256="0v7304912xhjz5bsngndvwi0y1qnk55xk9ariw2wi9msah1nm4d9"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; + resumer = derive2 { name="resumer"; version="0.0.5"; sha256="0k3s2i102hvsag7jiahgfpjc09646xjpxcpv5x3d91ch3xipdc0b"; depends=[dplyr rmarkdown useful]; }; rethinker = derive2 { name="rethinker"; version="1.1.0"; sha256="02zfx08s5xisv1v4y16iqbddi9kb3fcr249b3414fzvs4nm5as94"; depends=[rjson]; }; - reticulate = derive2 { name="reticulate"; version="1.18"; sha256="04w5c9jfxakb4rr2qjynxgagb42khsja3y4dwgxywiplb1d8agxk"; depends=[jsonlite Matrix rappdirs Rcpp]; }; - retimes = derive2 { name="retimes"; version="0.1-2"; sha256="019sllyfahlqnqry2gqw4w5cy4cavrqnwpwrbb25cgjpdb19raja"; depends=[]; }; + reticulate = derive2 { name="reticulate"; version="1.20"; sha256="0ay8cb0d3lj702aw338lkc7sxj9j05izji3waww1z0lph16406bh"; depends=[jsonlite Matrix png rappdirs Rcpp withr]; }; retistruct = derive2 { name="retistruct"; version="0.6.3"; sha256="1zij37n2ja3yx6n1agdkb3lj42p01parcg6djv60bng9c2qq0wsl"; depends=[foreign geometry png R_matlab R6 rgl RImageJROI RTriangle sp ttutils]; }; retractcheck = derive2 { name="retractcheck"; version="1.0.0"; sha256="1c4p8afh9g359s560sswcys3manc0lqvk0aqgvd09p4rpzls2dm7"; depends=[httr plyr textreadr]; }; retrodesign = derive2 { name="retrodesign"; version="0.1.0"; sha256="173jrpzasimplv8vbm8gzpl8aibnsjkgvhz1hd75is0b2l8gnbxy"; depends=[]; }; @@ -13852,16 +14406,15 @@ in with self; { rfPermute = derive2 { name="rfPermute"; version="2.1.81"; sha256="0mak4r3j5vbjjkcsbxj0yg2xrbipq4rz873b02drkb769nh3d16a"; depends=[abind dplyr ggplot2 gridExtra magrittr randomForest rlang scales swfscMisc tibble tidyr]; }; rfUtilities = derive2 { name="rfUtilities"; version="2.1-5"; sha256="1anwvmxn3xrc1aqxl75rzlk4wby8l54rmkp0bgi8dgbz2l223xr0"; depends=[cluster randomForest]; }; rfVarImpOOB = derive2 { name="rfVarImpOOB"; version="1.0.1"; sha256="16ivcnnzrgqzfzcbdyi10rwn8r8r0yyxyfpx25lxafb6pj3kxpvf"; depends=[binaryLogic dplyr ggplot2 ggpubr magrittr prob randomForest titanic]; }; - rfacebookstat = derive2 { name="rfacebookstat"; version="2.1.9"; sha256="15g56zxr15z48fzsqb57dij9ki70faaspc5ga5dyjshw0s79xcna"; depends=[dplyr httr jsonlite purrr stringr tidyr tidyselect]; }; - rfacts = derive2 { name="rfacts"; version="0.0.2"; sha256="0g19j0y2q63f0vyf3ijgvx2m514m9d5ainq706s6bfdhqqsd00ww"; depends=[tibble xml2]; }; + rfacebookstat = derive2 { name="rfacebookstat"; version="2.3.0"; sha256="1g0ln7dan504br3h72g0prnwdwdsa8zh557r6sda7w29nzc809ql"; depends=[dplyr httr jsonlite pbapply purrr stringr tidyr tidyselect]; }; + rfacts = derive2 { name="rfacts"; version="0.1.1"; sha256="1qkc619vhph6lgrf59kbz9cda2vqwfvb5b9mm2f11qqy310ha9aj"; depends=[digest fs tibble xml2]; }; rfieldclimate = derive2 { name="rfieldclimate"; version="0.1.0"; sha256="1s7awczna9dxdq97sr5fsbs4qv7rx4wi2z3inwdp33md1bvyq4i7"; depends=[digest dplyr httr jsonlite lubridate magrittr purrr tidyr]; }; rfigshare = derive2 { name="rfigshare"; version="0.3.7"; sha256="1qgzn0mpjy4czy0pnbi395fxxx84arkg8r7rk8aidmd34584gjiq"; depends=[ggplot2 httpuv httr plyr RJSONIO XML yaml]; }; rfinterval = derive2 { name="rfinterval"; version="1.0.0"; sha256="1z7v0sbql6g2h3fr1268nj79rbx1d33hjfaraxhbikrjgb8mbp0w"; depends=[MASS ranger]; }; - rfishbase = derive2 { name="rfishbase"; version="3.0.4"; sha256="1km3xjbf3l81sfmmjs55criq4xw6l3xa74f8g1rxsbr5bci9xlia"; depends=[dplyr gh magrittr memoise purrr readr rlang stringr]; }; + rfishbase = derive2 { name="rfishbase"; version="3.1.7"; sha256="1qjnn43bgp45lgkdz4x4yfs75xndg3nvhca659nxxwcvs31npnlw"; depends=[arkdb curl DBI dbplyr dplyr gh magrittr memoise progress purrr readr rlang RSQLite stringr]; }; rfisheries = derive2 { name="rfisheries"; version="0.2"; sha256="16j3hn1py8khqadmh81qsg76c62wzqkaq3fn39z0z5mgynmcm62j"; depends=[assertthat data_table ggplot2 httr rjson]; }; rfishnet2 = derive2 { name="rfishnet2"; version="0.2.0"; sha256="0g90h4353kp7szv3971kb4l5x3x08qx4f9ln85n5g3b3zdg77dkz"; depends=[dplyr ggplot2 pracma rworldmap sf]; }; - rflexscan = derive2 { name="rflexscan"; version="0.3.1"; sha256="0kfibdwgjjzl4pnw5kzchba624g5z8bca30jy3zfwhd6d9r8n07j"; depends=[igraph Rcpp rgdal sp]; }; - rflights = derive2 { name="rflights"; version="0.1.103"; sha256="1gxfsc3dhlzy6bpqjdxk5x309jmjgvxr8d9amnhrjdygzj6icf18"; depends=[httr]; }; + rflexscan = derive2 { name="rflexscan"; version="0.4.0"; sha256="1hp8crrs0f534j60db1byi3jcn815kl1i7afrzh6ww48mxnmxrhj"; depends=[igraph Rcpp rgdal sp]; }; rfm = derive2 { name="rfm"; version="0.2.2"; sha256="1s8h9ll4l5xq3m7ib83zrab49p5q4wclk8qiy2hgjr2hq1sb7wak"; depends=[dplyr ggplot2 ggthemes lubridate magrittr RColorBrewer rlang tibble tidyr xplorerr]; }; rfml = derive2 { name="rfml"; version="0.1.0"; sha256="133adpfjpp14m47841k6ybq9lrvby9bxgr5zs4i3akjr2575nq1j"; depends=[httr jsonlite PKI XML]; }; rfoaas = derive2 { name="rfoaas"; version="2.1.0"; sha256="0w6m3lvfb60a2zfvyc0ksnfllb2ndy45b301vk9f3nr27lxdz6dm"; depends=[httr]; }; @@ -13869,31 +14422,35 @@ in with self; { rforensicbatwing = derive2 { name="rforensicbatwing"; version="1.3.1"; sha256="1i521h2nmlkhcxfxqir8jfjv0llwr6cz0ck5w6hzplk48044bn16"; depends=[Rcpp]; }; rfviz = derive2 { name="rfviz"; version="1.0.0"; sha256="0rzyy7r2ybqjnp1g5bbkxydpa93h8q4r71kdaj77r475m2i4kb6b"; depends=[loon randomForest]; }; rgabriel = derive2 { name="rgabriel"; version="0.7"; sha256="1c6awfppm1gqg7rm3551k6wyhqvjpyidqikjisg2p2kkhmyfkyzx"; depends=[]; }; - rgbif = derive2 { name="rgbif"; version="3.4.0"; sha256="0p08sbr5mgw8zdzvfiijcg78px4kgf21zdg5jr2y0qg797mbg6hk"; depends=[conditionz crul data_table geoaxe ggplot2 jsonlite lazyeval magrittr oai R6 tibble whisker wicket xml2]; }; - rgdal = derive2 { name="rgdal"; version="1.5-18"; sha256="1pr267sh0v6cympdg12yny51cmn4r20s5sjq2hqymn4kphcpqijk"; depends=[sp]; }; + rgbif = derive2 { name="rgbif"; version="3.5.2"; sha256="0qgjh68k1h44lpf6ihzbqq74ydq3hj2yz2m6fnksxa4sqxawqbv7"; depends=[conditionz crul data_table ggplot2 jsonlite lazyeval magrittr oai R6 tibble wellknown whisker xml2]; }; + rgdal = derive2 { name="rgdal"; version="1.5-23"; sha256="0vnb7kw762y349pda4aq1hx0smafylmn3635l963qykfji5p99cw"; depends=[sp]; }; rgdax = derive2 { name="rgdax"; version="1.0.0"; sha256="16ph6n1nyl2v2w51ih6wzkpw0j0hfa3f60q1g6p9zis59j0rh7d9"; depends=[digest httr jsonlite RCurl]; }; + rgee = derive2 { name="rgee"; version="1.0.9"; sha256="0mrmny4yf3x8wlc4ayghc1gchhlb6vvn57ynnxa4wv8smq1k8qci"; depends=[cli crayon jsonlite leafem leaflet magrittr processx R6 reticulate]; }; rgen = derive2 { name="rgen"; version="0.0.1"; sha256="0gl82v09q1ha58wd1014s46wzkx1yf348bc7jkl6s4qdc6c4vsb8"; depends=[]; }; rgenie = derive2 { name="rgenie"; version="1.0.0"; sha256="1gsq9pkah5fnhjsxbyidngcs0362p8jnpvxycpkb9jaf5ykpq56m"; depends=[cowplot dplyr egg FNN forcats ggdendro ggplot2 gridExtra IRanges magrittr readr Rsamtools stringr tibble tidyr variancePartition]; }; rgenius = derive2 { name="rgenius"; version="0.1.0"; sha256="1gpglnhicyv16ym224wzaw52w9xr63slm75wvidl3z14izzyy7ga"; depends=[doParallel dplyr foreach httr purrr rvest stringr tibble]; }; rgenoud = derive2 { name="rgenoud"; version="5.8-3.0"; sha256="0p93wf6ghgz2nifxbscb6bhahh5jd2ba7nh1c2mb6fmbxnsi3swv"; depends=[]; }; + rgeoda = derive2 { name="rgeoda"; version="0.0.8-1"; sha256="11138d3bg9rkyv06sqa9hkr6s0s69b48rf5ji8fam2lgvz28p5g3"; depends=[BH digest Rcpp sf]; }; rgeolocate = derive2 { name="rgeolocate"; version="1.3.1"; sha256="1ikharp5f0ddh5wx1a8xf46fcwpz9xc4vl7s386h0jmkph1s0072"; depends=[httr Rcpp]; }; rgeopat2 = derive2 { name="rgeopat2"; version="0.3.9"; sha256="0l0sqkvjkzp4lmyk55l7zc02y04sa43cps47005gq8c38kyks45k"; depends=[readr sf stringr]; }; - rgeoprofile = derive2 { name="rgeoprofile"; version="0.2.0"; sha256="1k5nxvdl46b77sshzvzqhgl0s38ng63z53z17jmfdyf4wwzrnhah"; depends=[aspace geosphere leaflet pals RANN raster sp spatstat splancs]; }; + rgeoprofile = derive2 { name="rgeoprofile"; version="0.2.1"; sha256="0a4b2v7rslvvc8z2fyv2imwhdl198giwhn8i68wk57jx0wqwzll8"; depends=[aspace geosphere leaflet pals RANN raster sp spatstat_geom splancs]; }; rgeos = derive2 { name="rgeos"; version="0.5-5"; sha256="086l0qk3p4jq23bs91c4a65x4qz99z0hy0vsnvfqfvppdzz0vajb"; depends=[sp]; }; rgexf = derive2 { name="rgexf"; version="0.16.0"; sha256="1vj5ha1qx0xzflchxf25ycys6clfn9y32m1717afzkvhmkwisrra"; depends=[igraph servr XML]; }; rgho = derive2 { name="rgho"; version="2.0.1"; sha256="1byvq2swn2j9v0zy5smjklv7bkncrclhli62cf1f2wiah5qg8sv2"; depends=[curl dplyr httr jsonlite lazyeval magrittr memoise readr rlang tibble tidyr]; }; - rgl = derive2 { name="rgl"; version="0.103.5"; sha256="1vf3ggg4w6g870hkcf39qskh5pxyphv1lf2mdjdwx2j00gk8wwdy"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr manipulateWidget mathjaxr shiny]; }; - rglobi = derive2 { name="rglobi"; version="0.2.21"; sha256="12v6g1ja4rrw0vcrrzgd1llxfk64g9z4f0c90rkbd9cknvnn0id9"; depends=[curl RCurl readr rjson]; }; + rgl = derive2 { name="rgl"; version="0.106.8"; sha256="0m1zvbmw81za680zq7h4agxr88pi7h5hz812r45vzmgc7hlw4apw"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr manipulateWidget shiny]; }; + rglobi = derive2 { name="rglobi"; version="0.2.22"; sha256="0kws5qrs74z6mkg8mckrfscgbd1gdbxk76r7g94p74h1xmvvjc3i"; depends=[curl RCurl readr rjson]; }; rglwidget = derive2 { name="rglwidget"; version="0.2.1"; sha256="0siqxn3gyl98i84p0yha821b4rdrp2i0942mkx819wnf7qwrpqcv"; depends=[rgl]; }; - rgnparser = derive2 { name="rgnparser"; version="0.1.0"; sha256="0gpwj1z1n5ckc4gh81zmpaibdg0frb776xq1v74v9vhc96vl9hjg"; depends=[jsonlite readr sys tibble]; }; + rgnparser = derive2 { name="rgnparser"; version="0.2.0"; sha256="01dmnyyprnayzn21vgdj9058l17kx8z4fisw4bp4lc6yif39q1r9"; depends=[jsonlite readr sys tibble]; }; rgoogleslides = derive2 { name="rgoogleslides"; version="0.3.2"; sha256="0h9gws1vcf0zdd21d8b65c2yz9kxppp3218h5lhd5iz879ajwa2i"; depends=[assertthat httr jsonlite R6]; }; rgr = derive2 { name="rgr"; version="1.1.15"; sha256="1mrnmbh2crhkwdi37q59hx76afvkhgzgaacg3688q7jp23d58z6x"; depends=[fastICA MASS]; }; - rgrass7 = derive2 { name="rgrass7"; version="0.2-3"; sha256="0y9iydn6hxb0dhm050amhg72y7ygg4d3f7ryymkvl3hasa0md8nz"; depends=[XML]; }; + rgrass7 = derive2 { name="rgrass7"; version="0.2-5"; sha256="1vj3m7071wd31hzas40l8nj6blr6r9cyqi6rdi68842vhznwbac8"; depends=[XML]; }; + rgrassdoc = derive2 { name="rgrassdoc"; version="1.0.0"; sha256="18fcacf4v9n8cd27rc2lidwqm04151ya30pcs0bfhkssz80x0zds"; depends=[cli rlang rstudioapi xml2]; }; rgsp = derive2 { name="rgsp"; version="0.2.0"; sha256="1fk0k479srfr0f4a5abyzcrzwy9hr1v5xf0jgs36fbim9bh7njlc"; depends=[dplyr magrittr tibble]; }; - rgugik = derive2 { name="rgugik"; version="0.2.1"; sha256="08kjz4mh9m9r3fw3sdvzfm1l0ar1zxl8my0v64g18mc9j1b3jsq3"; depends=[jsonlite openssl sf]; }; + rgugik = derive2 { name="rgugik"; version="0.3.1"; sha256="17cvxbjjzyf4v8pwcwikb02qrbwgsr6f6bh4brs48zh1jvzbcgzd"; depends=[jsonlite openssl sf]; }; rgw = derive2 { name="rgw"; version="0.3.0"; sha256="0hzkajmvqkmv6c238rdgyc6g16h96d5a0lnajnn5m87j0gwsl6wa"; depends=[]; }; rhandsontable = derive2 { name="rhandsontable"; version="0.3.7"; sha256="1y6dlpzid5apjx0gphkym7gq3lhwp0bxan8ca274pg170xyb33h8"; depends=[htmlwidgets jsonlite magrittr]; }; - rhcoclust = derive2 { name="rhcoclust"; version="1.0.0"; sha256="1m2nvwjc8wpwc0dc06f83x91m3dmwm5mjinsrg4i0krlmrig75z9"; depends=[fields igraph tcR]; }; + rhcoclust = derive2 { name="rhcoclust"; version="1.1.0"; sha256="1d9a29h4h6z04vjjdfi0sx7wpl8iw5zg2ymjpjlppzbbzzq2l8n2"; depends=[fields igraph]; }; + rheroicons = derive2 { name="rheroicons"; version="0.3.2"; sha256="16rvsqlwp9j2v3zaqp37pwdjdj9ail21i4vicxq07c11x7r567gx"; depends=[htmltools shiny stringr]; }; rhierbaps = derive2 { name="rhierbaps"; version="1.1.3"; sha256="0i4sr2wwzzl8vki5zihnd8v4ia2kji09cmf4ld07b6k099g5xprr"; depends=[ape ggplot2 matrixStats patchwork purrr]; }; rhli = derive2 { name="rhli"; version="0.0.2"; sha256="1mb6bizqkg7zd8nc5a81fw7d0y0vcv6zh6y28k9vikqmc5l1n21q"; depends=[]; }; rhmc = derive2 { name="rhmc"; version="1.0.0"; sha256="1m79f1hx404y0k8lk3n6jnzhr6wwrk83xiym68sq1zvj0wjqiqmw"; depends=[]; }; @@ -13911,19 +14468,19 @@ in with self; { riceidconverter = derive2 { name="riceidconverter"; version="1.1.1"; sha256="143f76v3k2q9ddcxf2nzvd04pjgy7p120ln0zkmxpal20c81dwq6"; depends=[dplyr]; }; riceware = derive2 { name="riceware"; version="0.4"; sha256="0pky0bwf10qcdgg9fgysafr35xbmnr9q0jbh56fawj99nbyj3m70"; depends=[random]; }; rich = derive2 { name="rich"; version="1.0.1"; sha256="0kasr9gb85qhngfayqy3fvrsr0a066krwxsx21nsxcnss0mrqygr"; depends=[boot vegan]; }; - ricu = derive2 { name="ricu"; version="0.1.2"; sha256="1x8hdmafd83zxnvzwci53hrd0nryym2zf8zx61hvx8pj50qfnw8p"; depends=[assertthat backports cli curl data_table fansi fst glue jsonlite prt readr rlang tibble vctrs]; }; - ridge = derive2 { name="ridge"; version="2.7"; sha256="1xqk574zw0wf4jzjrnycn2jmln5sg93ki02d70hwaidmbmsiii84"; depends=[]; }; + ricu = derive2 { name="ricu"; version="0.1.3"; sha256="0gcd4nlkhkl7smap26kilbiw0ag6vavcm3plik8579ha1pimji15"; depends=[assertthat backports cli curl data_table fansi fst glue jsonlite prt readr rlang tibble vctrs]; }; + ridge = derive2 { name="ridge"; version="2.9"; sha256="0h6c1sv9nrwv0kx92kcdgcx149ls89zdlm2v7si27xcc040f5cz0"; depends=[]; }; ridigbio = derive2 { name="ridigbio"; version="0.3.5"; sha256="0526nscxynl3857zybpms1wr3230qby29kxglm919pcdvpjb5kz5"; depends=[httr jsonlite plyr]; }; ridittools = derive2 { name="ridittools"; version="0.1"; sha256="1m9xbwxb277l4cd85qxmpw66gyavpwamgwr8kyf8vqarzfbwiilr"; depends=[]; }; riem = derive2 { name="riem"; version="0.1.1"; sha256="0lwhsxb4pm26kb65hs8pa63bsbrgy0zchqm4i6pq9f2r9h8vsm1m"; depends=[httr jsonlite lubridate tibble]; }; rifle = derive2 { name="rifle"; version="1.0"; sha256="1r0cfj3vzndgiarl9sb38zmpnpm4p8v9l5cm9c1m6g2q9kvpgpbs"; depends=[MASS]; }; riingo = derive2 { name="riingo"; version="0.3.1"; sha256="1ww9ps0v1yga9dwb68crbhf56xw2svl7az95ifrdrswyyikj02vj"; depends=[crayon glue httr jsonlite purrr rlang tibble vctrs]; }; rijkspalette = derive2 { name="rijkspalette"; version="1.0.1"; sha256="0al5niymn6k6px6fh1pk3rvk3a3b2966bdfh0hprcjjl75a9mgvq"; depends=[crayon curl imager jsonlite]; }; - rinat = derive2 { name="rinat"; version="0.1.6"; sha256="089mjbpnp1b06qbxjh733brf9nz04rgh2spqngxs2kvd5d11jk9p"; depends=[ggplot2 httr jsonlite maps plyr sp]; }; + rinat = derive2 { name="rinat"; version="0.1.8"; sha256="1jp19scgizfi3qp419k2nkkpjm8zcvcgj85zlsa27sd6fjv6vv6m"; depends=[curl ggplot2 httr jsonlite maps plyr sp]; }; ring = derive2 { name="ring"; version="1.0.0"; sha256="03sbgxwzms20gp0hkm5s0dihqkx3qf6bw0jrays7jjzrrwzl5657"; depends=[R6]; }; rintimg = derive2 { name="rintimg"; version="0.1.0"; sha256="0jzs4mdwpzbpl0wchyhl3cpywk25ayaxalr12p4cnjl7vnmdm7dp"; depends=[glue htmltools]; }; rintrojs = derive2 { name="rintrojs"; version="0.2.2"; sha256="0vyqb3pyrh12saddar71ac9csn2vkd2j8ln6ygpqys8ky1lc3427"; depends=[jsonlite shiny]; }; - rio = derive2 { name="rio"; version="0.5.16"; sha256="0rfl56fdawlhc98451a9lcb6a6m56kw0i7dvd5hx58z025d8vsyk"; depends=[curl data_table foreign haven openxlsx readxl tibble]; }; + rio = derive2 { name="rio"; version="0.5.26"; sha256="1k6zxjb2bb0z6rv7zmkbaz85cbvs84mj602ikkwk60alh8kpdw2d"; depends=[curl data_table foreign haven openxlsx readxl tibble]; }; rioja = derive2 { name="rioja"; version="0.9-26"; sha256="02af6is38nakzr1hf9688n32m5glk1jyp2d9p4irn0mzk7r6r976"; depends=[mgcv vegan]; }; ripserr = derive2 { name="ripserr"; version="0.1.1"; sha256="1rwsd1yi5vrzdscjgr27fw0d1a6nkc8g2w5hqgqijiwm25h4wl17"; depends=[Rcpp]; }; rise = derive2 { name="rise"; version="1.0.4"; sha256="12r7mbaxp9pjypbpjxlsbqg7spw80gjgm2w0lsvgvclffc50a6ni"; depends=[dplyr ggplot2]; }; @@ -13935,44 +14492,46 @@ in with self; { riskSimul = derive2 { name="riskSimul"; version="0.1"; sha256="0s2a1mn6g11m96gqscb916caj2aykcs3rkacpqcdnlyzryk1gsnb"; depends=[Runuran]; }; riskclustr = derive2 { name="riskclustr"; version="0.3"; sha256="13fl00g0hzcl4vqvl8zl4m5bpp14948yvd4i4dbdrg1h8ym30ir5"; depends=[aod Matrix mlogit stringr]; }; risksetROC = derive2 { name="risksetROC"; version="1.0.4"; sha256="1fh0jf8v536qzf1v3awx3f73wykzicli4r54yg1z926ccqb4h80l"; depends=[MASS survival]; }; - riskyr = derive2 { name="riskyr"; version="0.2.0"; sha256="0zq5qybqisbh9k7i57s8yw9xcm7yckcjk17h4ybcx4p8788gg5m3"; depends=[]; }; - ritis = derive2 { name="ritis"; version="0.9.0"; sha256="0v0g7zbdx21ia98lb126cq2d1fwx24prng2p2r8lcgpxc34fdfsa"; depends=[crul data_table jsonlite solrium tibble]; }; + riskyr = derive2 { name="riskyr"; version="0.3.0"; sha256="07fm3gmjydby3mxivwr3rbg6q7fbjlnggfk26sfiqb2wl08dmx6j"; depends=[]; }; + ritis = derive2 { name="ritis"; version="1.0.0"; sha256="0dk1hpj2cahlw4lcdjnnllpnvdimaml57sfcw07iz2s0f8c24yrj"; depends=[crul data_table jsonlite solrium tibble]; }; riv = derive2 { name="riv"; version="2.0-5"; sha256="0n19jlrs12iysq45xyi3zvghkircg0ww5vbsfpnqkw5b22zsv30s"; depends=[MASS quantreg rrcov]; }; riverdist = derive2 { name="riverdist"; version="0.15.3"; sha256="029dkki4j285ik1fif0hd9gzq332xv7p88wbjbh52464waajh8pl"; depends=[rgdal sp]; }; rivernet = derive2 { name="rivernet"; version="1.2.1"; sha256="0p8jyigbxipwds9pdw2gzv3ql5yikg1ik4vbk4drylbp5xhmvyja"; depends=[]; }; - riverplot = derive2 { name="riverplot"; version="0.6"; sha256="0q1icpny8nkxyjhawyjzwrw8qlz0ayn2xyrsqrm4vkxyv6c9xk8z"; depends=[]; }; + riverplot = derive2 { name="riverplot"; version="0.10"; sha256="04ap1dsa7fx03l73jhv1ql3adaaaz2100qawdplxa9xmrllgcgbj"; depends=[RColorBrewer]; }; rivervis = derive2 { name="rivervis"; version="0.46.0"; sha256="19jsl5g46jcbc0kg47bsif1wrw9z9brgvwdcxqjc89shnx3hzzfv"; depends=[]; }; - rivr = derive2 { name="rivr"; version="1.2-2"; sha256="0xnkhglj5ky3ly73xif9kf400av2hwys8iq8yqhxwfdgy0jx7g6y"; depends=[Rcpp]; }; - rjade = derive2 { name="rjade"; version="0.1"; sha256="0f1jljj6m1almz0na984n0g314y0rl6a0mx04rbrpipgfgz1h37c"; depends=[V8]; }; + rivr = derive2 { name="rivr"; version="1.2-3"; sha256="10k4cqrlzcy5g0yqbkrzxfz0dwsnf8kgmfq011lj13kxpb38bpvy"; depends=[Rcpp]; }; + rjade = derive2 { name="rjade"; version="0.1.1"; sha256="0wv1vpy8ql1r9ya5mfqxdj7jv5wk029g8hjjp0xqp8dm507vj11x"; depends=[V8]; }; rjags = derive2 { name="rjags"; version="4-10"; sha256="1nhaim84ww8fd6m8xlpmngqcnp2qpql29ahc38366fxja3ghngmx"; depends=[coda]; }; rjazz = derive2 { name="rjazz"; version="0.1.7"; sha256="0wmqlpgcr98dvapfmdcph5mdv202rzzsvb06iy5sqvpizpg7pbsz"; depends=[RCurl]; }; rjdmarkdown = derive2 { name="rjdmarkdown"; version="0.2.0"; sha256="14ndhhxxx7jb9ljhfjxmdrl3kgb1zsrv00kznl2k50fwxx4z66f2"; depends=[kableExtra knitr magrittr RJDemetra]; }; rjdqa = derive2 { name="rjdqa"; version="0.1.1"; sha256="0d7jv3a2a7p7h6jnr5znln06x6m4mksb6cy44xdxir1pwcd1z6br"; depends=[plotrix RJDemetra XLConnect]; }; rje = derive2 { name="rje"; version="1.10.16"; sha256="1a9lxikc5n4sb5fzlw8w8ys65npvlvqfail3mq5zi46smd1s9qp8"; depends=[knitr]; }; rjmcmc = derive2 { name="rjmcmc"; version="0.4.5"; sha256="14rzvp6z5avlcnmlmvb6w4gvlh6v4ncbcai3v4c4svnjv555vz45"; depends=[coda madness mvtnorm]; }; - rjpdmp = derive2 { name="rjpdmp"; version="0.1.0"; sha256="1amkvg75jp0pz39smhb60wryxhwzl0fv4870lhldlp8w6pv672kg"; depends=[data_table Rcpp RcppArmadillo]; }; + rjpdmp = derive2 { name="rjpdmp"; version="1.0.0"; sha256="017cbrrmgh4p5almsyxrp86yg3kkg59kz5snnb1xb4qr068zfpm7"; depends=[data_table Rcpp RcppArmadillo]; }; rjqpd = derive2 { name="rjqpd"; version="0.2.3"; sha256="14vbp9s2859h4n3m3bq830nvxvk58h3mvvdnb27qsalbcfwd94v5"; depends=[]; }; rjson = derive2 { name="rjson"; version="0.2.20"; sha256="0v1zvdd3svnavklh7y5xbwrrkbvx6053r4c5hgnk7hz7bqg7qa1s"; depends=[]; }; rjstat = derive2 { name="rjstat"; version="0.4.1"; sha256="0kqnl4wizmain70ady982aldhscf24870shvf3sviknplshhgk8j"; depends=[checkmate jsonlite]; }; rjwsacruncher = derive2 { name="rjwsacruncher"; version="0.1.0"; sha256="0pbf3yl7cnx8vv07x9nwgrglv5h8r135fc840pxvapi099nr7ijl"; depends=[XML]; }; rkafka = derive2 { name="rkafka"; version="1.1"; sha256="0c0hszsmmd876jcfamjcfb7bxw7869zgy99j4i6ksb8za232nmmw"; depends=[rJava rkafkajars RUnit]; }; rkafkajars = derive2 { name="rkafkajars"; version="1.1"; sha256="121qnzxhipgv145lhmr6h356jpdd6knsx7f21cv9a8r5r009d42z"; depends=[rJava RUnit]; }; - rkeops = derive2 { name="rkeops"; version="1.4.1.1"; sha256="1k5j7j0yxk3azvkafhmpzgk87iwmjir9l1mq6pk5sdvn9ykyj85g"; depends=[openssl Rcpp RcppEigen stringr]; }; + rkeops = derive2 { name="rkeops"; version="1.4.2.2"; sha256="1b2sdbhx1ar1325mf1xgc561as9x8q8vjqslly9xms2h572c8yn3"; depends=[openssl Rcpp RcppEigen RhpcBLASctl stringr]; }; rknn = derive2 { name="rknn"; version="1.2-1"; sha256="1x9r01314q0wgqwqzd7d13ycjzb4jzghzd3whgjvm2rsmnabai95"; depends=[gmp]; }; - rkt = derive2 { name="rkt"; version="1.5"; sha256="1rgf7dnk4d1b46rns2mb2s1ilxq7hqrh057vrrl00324r4h8bs1k"; depends=[]; }; + rkt = derive2 { name="rkt"; version="1.6"; sha256="1sqij8ivjrrb1lii3jwvgsx9zqv47ib1lhrh6zvvh5a67didwrih"; depends=[]; }; rkvo = derive2 { name="rkvo"; version="0.1"; sha256="0ci8jqf9nc8hb063nckxdnp0nlyr4ghby356lxm00anw44jlmw8v"; depends=[Rcpp]; }; - rlang = derive2 { name="rlang"; version="0.4.10"; sha256="0ximv89f6zymnwms121k1jfvvflrdm3pmmf5xyvz56f1qiq04lq7"; depends=[]; }; - rlas = derive2 { name="rlas"; version="1.3.8"; sha256="0ry2khz6xjs6jr3j5jspmm0mvxbgp00f4klkangqspxzakgfw3k2"; depends=[BH data_table Rcpp]; }; + rlang = derive2 { name="rlang"; version="0.4.11"; sha256="1pfm24jjkxzdb5qcbc05dcjxyk69zpfr5jv4xakqh1xh41mr43kl"; depends=[]; }; + rlas = derive2 { name="rlas"; version="1.4.0"; sha256="0a5m4i5ld32rd1ymp0hhgw0pv3rhfgbf22fgafx3gxvc74fxyfjz"; depends=[BH data_table Rcpp]; }; rlc = derive2 { name="rlc"; version="0.3.0"; sha256="187nm0hl71yhnsp9cp9s33sv8jhzrmy36s62fpd8kh8yrmh5dkz8"; depends=[hwriter jrc jsonlite plyr R6 stringr]; }; rld = derive2 { name="rld"; version="1.0"; sha256="1glv4q25z14hcwifwg623h77p4awpsn3nk843pnph4sb3p5qbmn3"; depends=[emdbook MASS survival]; }; rle = derive2 { name="rle"; version="0.9.2"; sha256="0sagl0jggg40lihzy7pfq4593rfvc3b3f7g6ggi85s7n18qvwg40"; depends=[]; }; rleafmap = derive2 { name="rleafmap"; version="0.2"; sha256="1i2qczipg7lr6fl35lcl896r54jia7libxx83darrfzc1hd9sdcq"; depends=[knitr raster sp]; }; rlecuyer = derive2 { name="rlecuyer"; version="0.3-5"; sha256="09mniai7v8gapr6hd3zm8sm3vi1zcyhgym389904ykb2yx7l68s7"; depends=[]; }; rless = derive2 { name="rless"; version="0.1.1"; sha256="0ham8kf2hbswrcnc5i5b3svywdwq3kwp9n66n4k9sllahl4x9jdn"; depends=[V8]; }; - rlfsm = derive2 { name="rlfsm"; version="1.0.1"; sha256="114afkycgn6ny6npzgb2qx6wc8ikyymsgxxb4jb3h5makdz6bi27"; depends=[doParallel foreach ggplot2 plyr Rcpp Rdpack reshape2 stabledist]; }; + rlfsm = derive2 { name="rlfsm"; version="1.0.3"; sha256="0pnxy4gnkbk2alm4bjk6i1yik880li1jqkq63dwm7g441fhx30kx"; depends=[doParallel foreach ggplot2 plyr Rcpp Rdpack reshape2 stabledist]; }; + rliger = derive2 { name="rliger"; version="1.0.0"; sha256="1gqdwmy073sg48id015q02bx20xsqyc6jpbw4nym3c09cqz681dr"; depends=[cowplot doParallel dplyr FNN foreach ggplot2 ggrepel hdf5r ica irlba Matrix mclust patchwork plyr psych RANN Rcpp RcppArmadillo RcppEigen RcppProgress riverplot rlang Rtsne uwot]; }; rlist = derive2 { name="rlist"; version="0.4.6.1"; sha256="08awy2p7rykc272wvvya4ddszbr7b7s7qv4wr3hs8ylr4jqlh0dv"; depends=[data_table jsonlite XML yaml]; }; rlmDataDriven = derive2 { name="rlmDataDriven"; version="0.4.0"; sha256="1fhh2siafpqmvpxi2piccxvvn5n38s5d6as6iyn43rgpsslswc8g"; depends=[MASS tseries]; }; rlme = derive2 { name="rlme"; version="0.5"; sha256="0p26mw4g12l279lh80vqcjs3pvjr759ap2m622490k1i2ralxzif"; depends=[magic MASS mgcv nlme quantreg Rcpp robustbase stringr]; }; + rlog = derive2 { name="rlog"; version="0.1.0"; sha256="0g9gjf37gly68drm8a8zcnwxcigm2djsm3angglzwd04mmlkgwpy"; depends=[]; }; rly = derive2 { name="rly"; version="1.6.2"; sha256="1bb55g3rip524dccaxvahjxsi2cimxqvzc897pxplv3bb10pm0r2"; depends=[futile_logger R6]; }; rmRNAseq = derive2 { name="rmRNAseq"; version="0.1.0"; sha256="0hh44bn7z7945aw722haazw8dx7fwzym67jismkygzhnksh59wqi"; depends=[AUC Biobase DESeq2 edgeR limma MASS Matrix nlme reshape rlang splineTimeR statmod]; }; rma_exact = derive2 { name="rma.exact"; version="0.1.0"; sha256="1igs92la79akyqj84ah23lpcay7i33k7zgzcwm7sii782fhirivx"; depends=[abind metafor]; }; @@ -13981,33 +14540,32 @@ in with self; { rmapshaper = derive2 { name="rmapshaper"; version="0.4.4"; sha256="11diajgz8jkfa2d725n0iy0psiw3x4d7kbdvdrd1prwdjsyh7i5d"; depends=[geojsonio geojsonlint jsonlite readr sf sp V8]; }; rmapzen = derive2 { name="rmapzen"; version="0.4.2"; sha256="1vybg3lmrqghvd23jwpfmypvqz2b65bc0m2pwbpizwkkg35iza70"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; }; rmargint = derive2 { name="rmargint"; version="2.0.2"; sha256="0irq5114dd8pngl6k13r2rrsivijiqfldm6mby0q5a9wrj2vmwc9"; depends=[]; }; - rmarkdown = derive2 { name="rmarkdown"; version="2.6"; sha256="1c7nrpnv2v43msv7nia90rjh6s5x9m5wlb3mpiwy04fyfb29krz6"; depends=[evaluate htmltools jsonlite knitr stringr tinytex xfun yaml]; }; + rmarkdown = derive2 { name="rmarkdown"; version="2.7"; sha256="0shj637qhpcf30il3lhl3k5bxi5l3x3gf612hbqlakp1qrgrf8lm"; depends=[evaluate htmltools jsonlite knitr stringr tinytex xfun yaml]; }; rmatio = derive2 { name="rmatio"; version="0.14.0"; sha256="072fxg81r4rsc71qrf5p6lr5s3gchbgvxhyzwlx3wxw7y2px6w7y"; depends=[Matrix]; }; rmcfs = derive2 { name="rmcfs"; version="1.3.1"; sha256="1y59r4n2ywinfpkb7zn7gygl97w6p0rvr90sjqy4vdhi60ka16kf"; depends=[data_table dplyr ggplot2 gridExtra igraph reshape2 rJava stringi yaml]; }; - rmcorr = derive2 { name="rmcorr"; version="0.4.1"; sha256="0mg9i9nb3qycl1q66y6lsvlqiri2n6v32f18js6z6n7z0wb6dgp3"; depends=[psych RColorBrewer]; }; + rmcorr = derive2 { name="rmcorr"; version="0.4.3"; sha256="1qz29jx3vcvlbmiby483kbpp2b7nfyys6h33ljhdyqiz4533mkyf"; depends=[psych RColorBrewer]; }; rmdHelpers = derive2 { name="rmdHelpers"; version="1.2"; sha256="1ahzbs8z7wvh1dwbq1kq8wrjrknxi2gck63k70gj0swjvgk0ih5r"; depends=[dplyr knitr]; }; rmda = derive2 { name="rmda"; version="1.6"; sha256="1m7j79jwii9la47w34ka3yl1n7nql8pfn32if0aycn4yw5sy8dmc"; depends=[caret MASS pander reshape]; }; rmdcev = derive2 { name="rmdcev"; version="1.2.4"; sha256="0pdw390fknivnfkrzlk1rcv34prgnang50rfgmfpm2g9l6kjckxp"; depends=[BH dplyr Formula purrr Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders tibble tidyr]; }; rmdfiltr = derive2 { name="rmdfiltr"; version="0.1.3"; sha256="0llnn4pdfznidalm4f7fpyxbhzsqv1096fkbsl1pgf4f7ll6w7a7"; depends=[assertthat rmarkdown]; }; - rmdformats = derive2 { name="rmdformats"; version="1.0.0"; sha256="1xpzs369wpwkv9mqh91v93s7l0pya4mrjycm3panwv65pdcy9698"; depends=[bookdown htmltools knitr rmarkdown]; }; + rmdformats = derive2 { name="rmdformats"; version="1.0.2"; sha256="1492wvfgld7z5acniscs9yhrlyjwb5145a0xfp1cn5vvg40xn7bc"; depends=[bookdown htmltools knitr rmarkdown]; }; rmdpartials = derive2 { name="rmdpartials"; version="0.5.8"; sha256="15dw0pk1hdif839k60swna4li04inf7fzsiq9bxbw2wk5pdkqirn"; depends=[digest knitr rlang]; }; rmdplugr = derive2 { name="rmdplugr"; version="0.4.1"; sha256="16wmrya8wdipqcrh34k4v4iq05aqd0jwf7rg6w1wsvx2i9211xg6"; depends=[bookdown rmarkdown]; }; rmdshower = derive2 { name="rmdshower"; version="2.1.1"; sha256="1sjpi5ils31adii51gaa8ly7x93l9ganp6in8rsln6si4jc2ppg9"; depends=[rmarkdown]; }; rmdwc = derive2 { name="rmdwc"; version="0.1.1"; sha256="0qbh3i44l6zqcqcnqv5lyf3lqdr10sahpykvg8p0bry8nscgv2hv"; depends=[knitr]; }; rmeta = derive2 { name="rmeta"; version="3.0"; sha256="0vkbnxp579v8zmcv1isdbzj5swpr6fq17zwparxcvzswjc2x9ydr"; depends=[]; }; - rmetalog = derive2 { name="rmetalog"; version="1.0.2"; sha256="00ln3wl23ybjgs44h9x388p56x8jymd54vbcfpzidbhz2im1ilbf"; depends=[ggplot2 lpSolve]; }; - rmetasim = derive2 { name="rmetasim"; version="3.1.14"; sha256="0rdkhfgyr97r2d1kd9g8ipb2pn563qxm1y4m9z678q0kqan2ddl0"; depends=[ade4 adegenet gtools pegas]; }; + rmetalog = derive2 { name="rmetalog"; version="1.0.3"; sha256="1naqhv81gdcgl2vi2sa3nb006mn8dxc0rdc49v321a5b10bybzvr"; depends=[ggplot2 lpSolve]; }; rmgarch = derive2 { name="rmgarch"; version="1.3-7"; sha256="108wrbqj4c02c9cyv5m5xlswb1mlfdrhggb005sixr2dcqghb163"; depends=[Bessel corpcor ff MASS Matrix pcaPP Rcpp RcppArmadillo Rsolnp rugarch shape spd xts zoo]; }; rmi = derive2 { name="rmi"; version="0.1.1"; sha256="1y0395l9lhskdrk3x9ps2dmv0sznsba0n6a9fmma33dc9dhywgf9"; depends=[BH Rcpp RcppArmadillo]; }; rminer = derive2 { name="rminer"; version="1.4.6"; sha256="1xydc43is756cy4vsm4k4micj88hhqgyrhb8cmvgv1y8zfrzg2qz"; depends=[adabag Cubist e1071 glmnet kernlab kknn lattice MASS mda nnet party plotrix pls randomForest rpart xgboost]; }; - rminizinc = derive2 { name="rminizinc"; version="0.0.2"; sha256="1hxzrzxixyl2440jgxy8sd3d0z6d04sxaxqx86pa79fv20wqri04"; depends=[checkmate R6 Rcpp rjson rlang rlist]; }; + rminizinc = derive2 { name="rminizinc"; version="0.0.6"; sha256="1b8x8h695pv963qm5xkss1kc97dcdzvzxzzjnijq1mgzrrr82cri"; depends=[checkmate R6 Rcpp rjson rlang rlist]; }; rmio = derive2 { name="rmio"; version="0.2.0"; sha256="0g1sb5av8mw1b4absd5ydxrh93cp5k5x31kl6ghamx8i8irr1ngk"; depends=[]; }; rmonad = derive2 { name="rmonad"; version="0.7.0"; sha256="1vjx8kk57xk7c2a05c6kn75n17842ya7j41hqj3wmgq8yvaxrngx"; depends=[digest glue igraph magrittr pryr]; }; - rmoo = derive2 { name="rmoo"; version="0.1.5"; sha256="0yy8vvwfwhc15lsz0b7zh4rk5s1qh1lvgl3k2fa9nk9arascb22w"; depends=[ecr rgl]; }; + rmoo = derive2 { name="rmoo"; version="0.1.6"; sha256="1q2zs92ab1apxnk2j8afzglc0ch6c2dyfqmdglk8b941b2n0i78m"; depends=[cdata dplyr ecr ggplot2 plotly reshape2]; }; rmpw = derive2 { name="rmpw"; version="0.0.4"; sha256="1a49rvdwvmccv4gfir48fw0b9jyrpc2q9zfyk5j9b7nxsx6x7abl"; depends=[gtools MASS]; }; - rms = derive2 { name="rms"; version="6.1-0"; sha256="0llz519rgnc7v2jqhfrjgixkpkmmi5wi1a52hgz3n28s46ww77mq"; depends=[cluster digest ggplot2 Hmisc htmlTable htmltools lattice MASS multcomp nlme polspline quantreg rpart SparseM survival]; }; + rms = derive2 { name="rms"; version="6.2-0"; sha256="1di4xvsx0rwkr77nfqiysbg4qf699199xqil70i39d4zwfzqrm8h"; depends=[cluster digest ggplot2 Hmisc htmlTable htmltools lattice MASS multcomp nlme polspline quantreg rpart SparseM survival]; }; rms_gof = derive2 { name="rms.gof"; version="1.0"; sha256="1n0h3nrp11f2x70mfjxpk2f3g4vwjaf4476pjjwy49smxxlxwz82"; depends=[]; }; - rmsb = derive2 { name="rmsb"; version="0.0.1"; sha256="16bgr9w92y7fjp418g2mvfgh0hn444in4q7pd94k5s1kmv6232h5"; depends=[BH cluster digest ggplot2 Hmisc knitr loo MASS Rcpp RcppEigen RcppParallel rms rstan rstantools StanHeaders survival]; }; + rmsb = derive2 { name="rmsb"; version="0.0.2"; sha256="1q9f539kgrj84117zlqlvlgv8hhk29lr504jznw7im49jczqvwcq"; depends=[BH cluster digest ggplot2 Hmisc knitr loo MASS Rcpp RcppEigen RcppParallel rms rstan rstantools StanHeaders survival]; }; rmsfact = derive2 { name="rmsfact"; version="0.0.3"; sha256="05s23rfs9prr2ia3h4h9y614xhv91lbgppgf3mrrssxkwz220kd5"; depends=[]; }; rmsfuns = derive2 { name="rmsfuns"; version="1.0.0.1"; sha256="18bpj7xh3kc7pl6ivi3cripam26bsaf9r9099cjf22qndvy18hb6"; depends=[dplyr magrittr PerformanceAnalytics purrr readr tbl2xts xts zoo]; }; rmumps = derive2 { name="rmumps"; version="5.2.1-12"; sha256="142f8kf6qydh7qrdhs12836zri137f0b3vaq8kqmcvya07pviyr9"; depends=[Rcpp]; }; @@ -14026,30 +14584,30 @@ in with self; { rngtools = derive2 { name="rngtools"; version="1.5"; sha256="0xgmg3qb6insc157as47mcm9sdjdpy9jirh7w06bxb7pfcxqfx42"; depends=[digest]; }; rngwell19937 = derive2 { name="rngwell19937"; version="0.6-0"; sha256="0m6icqf7nckdxxvmqvwfkrpjs10hc7l8xisc65q8iqpnpwl5p2f6"; depends=[]; }; rnn = derive2 { name="rnn"; version="1.4.0"; sha256="0k960jylbvg8r453430d8dpdzydkk3yr5np8rxkay79533ikrcgy"; depends=[shiny sigmoid]; }; - rnoaa = derive2 { name="rnoaa"; version="1.2.0"; sha256="19vdb0hs3vww2w9c7j7m7yy33h7cscrd143xiqkikwxmgwjlf2f1"; depends=[crul data_table dplyr geonames ggplot2 gridExtra hoardr isdparser jsonlite lubridate rappdirs scales tibble tidyr tidyselect XML xml2]; }; - rnpn = derive2 { name="rnpn"; version="1.1.1"; sha256="1wll9yn85nb43hq3ngycaznqai03akns47q9x806d7v95ln90x34"; depends=[curl data_table httr jsonlite magrittr plyr raster rgdal sp tibble XML]; }; + rnoaa = derive2 { name="rnoaa"; version="1.3.2"; sha256="0lfk4fvdr4nbsgndqgzla6syyv231nv99s42wal9qp6vjnykmdk6"; depends=[crul data_table dplyr geonames ggplot2 gridExtra hoardr isdparser jsonlite lubridate rappdirs scales tibble tidyr tidyselect XML xml2]; }; + rnpn = derive2 { name="rnpn"; version="1.2.1"; sha256="17l62nwcqm591hb0a9zvmsvyphxf66lwk0z918sbqkr1r9zzwm4f"; depends=[curl data_table httr jsonlite magrittr plyr raster rgdal sp tibble XML]; }; rnr = derive2 { name="rnr"; version="0.2.1"; sha256="1z9bab3qmq8d79bcvjzldbxlah2w8mqp2ifd0cn1348dafwa0dhi"; depends=[assertthat purrr]; }; - rnrfa = derive2 { name="rnrfa"; version="2.0.3"; sha256="0c7yrnj65dvfa1rc062y9w25k4nqfa0j8mnid7dz7fzf567x56k3"; depends=[curl dplyr ggmap ggplot2 httr jsonlite lubridate rgdal sp tibble zoo]; }; - roadoi = derive2 { name="roadoi"; version="0.6"; sha256="1mlf63018qpgyqma51fas1nvags7qcrsw11hm6c1idnxjh0sz82z"; depends=[dplyr httr jsonlite miniUI plyr purrr shiny tibble tidyr]; }; + rnrfa = derive2 { name="rnrfa"; version="2.0.4"; sha256="0sy64bgb94ksgcy37kmj61iphf66i0jpx0qlrcsr24zr92syc1n2"; depends=[curl ggmap ggplot2 httr jsonlite lubridate rgdal sp tibble zoo]; }; + roadoi = derive2 { name="roadoi"; version="0.7"; sha256="1y7hhhavf2dgwkvp5i8n7gr6viqmikgch0a91cchcfyskd8rr7n9"; depends=[dplyr httr jsonlite miniUI plyr purrr rlang shiny tibble tidyr]; }; roahd = derive2 { name="roahd"; version="1.4.2"; sha256="1lq4aafag5cd9h6jffk6gv4m7v4p4y7wkdyxazw6fdwiqy8g4wvn"; depends=[dplyr magrittr robustbase scales]; }; robCompositions = derive2 { name="robCompositions"; version="2.3.0"; sha256="0pzvcshjjjfwlzfbqyw0i1wm4lj4s227wnb7nx3z9aa0g3iqd89d"; depends=[car cluster cvTools data_table e1071 fda fpc GGally ggplot2 kernlab MASS mclust pls Rcpp RcppEigen reshape2 robustbase rrcov sROC tidyr VIM zCompositions]; }; robFitConGraph = derive2 { name="robFitConGraph"; version="0.1.0"; sha256="092nc0xnjs2zxd9ij0dl1xggb8mwl8nly284yjhhygmwlwsvhzxm"; depends=[MASS mvtnorm Rcpp]; }; robcbi = derive2 { name="robcbi"; version="1.1-3"; sha256="0rj732qdd0wd9d9pxldnsw5rif5d7wz327iydvxcf5x8lgvk42jd"; depends=[robeth]; }; robcor = derive2 { name="robcor"; version="0.1-6"; sha256="1hw8simv93jq8a5y79hblhqz157wr8q9dzgm0xhvvv5nkzyqkpzf"; depends=[]; }; - robcp = derive2 { name="robcp"; version="0.2.5"; sha256="023g9w26bxia873qblscdcf50r7qv5hknwdx45dqbr3r778ls8bn"; depends=[]; }; roben = derive2 { name="roben"; version="0.1.0"; sha256="18k0h1y2xhvdssg28b9s4whn3kcbdgkz55dp1y3rrczw8xrm54mm"; depends=[glmnet Rcpp RcppArmadillo]; }; robeth = derive2 { name="robeth"; version="2.7-6"; sha256="1x0hzgq7jwl83wwmy581ia8009v0j95aksnr5ywpflnqm76rj6v2"; depends=[]; }; robets = derive2 { name="robets"; version="1.4"; sha256="0lvzfpv6569pjysblhadd05sglx0qvyr9wipb9cpiya4a1992n61"; depends=[forecast Rcpp]; }; robfilter = derive2 { name="robfilter"; version="4.1.2"; sha256="0mvpaf6g694b7175bl3yr6lxbwla4pwp7g4y34qb4klgl5n3nw03"; depends=[lattice MASS robustbase]; }; - robin = derive2 { name="robin"; version="1.0.2"; sha256="0jgy8rhwhgm2xim2aj4m671n0ld2q58kq4afbnn8db0g2l7gx7s9"; depends=[DescTools fdatest ggplot2 gprege gridExtra igraph networkD3 qpdf]; }; + robin = derive2 { name="robin"; version="1.0.3"; sha256="1axn687pc6ym5lbrqhsfjw9h5p5famgzqp3q505drysn33fv6nlw"; depends=[DescTools fdatest ggplot2 gprege gridExtra igraph networkD3 qpdf]; }; robis = derive2 { name="robis"; version="2.3.9"; sha256="1pz8904zhif1d02q6ar7winf313j3bjzxlaqsnbczxjjchs6j2g3"; depends=[dplyr ggplot2 httpcache httr jsonlite leaflet mapedit rlang sf tibble tidyr]; }; - robmed = derive2 { name="robmed"; version="0.7.0"; sha256="0j868y52fx1c85pw5bng278ybbh3b7h2bvmdrlj9irwgdvqphv9x"; depends=[boot ggplot2 quantreg robustbase shiny sn]; }; - robmixglm = derive2 { name="robmixglm"; version="1.2-0"; sha256="10nlkllzwzbzzvddxa29gc21p9lzsmdxzwr2lzylz66m8j9cgbda"; depends=[actuar bbmle boot doParallel doRNG fastGHQuad foreach MASS numDeriv Rcpp VGAM]; }; - robomit = derive2 { name="robomit"; version="1.0.3"; sha256="1ri9x9c3dmib7si8anjg9k4sxzkjvlwpc5b6lw8ib9kp97frw32l"; depends=[broom dplyr ggplot2 plm tibble tidyr]; }; + robmed = derive2 { name="robmed"; version="0.8.0"; sha256="11gzs20jdsishn723bpvalnbs69jv1cysgsqcgjm3i60xcsfz5pl"; depends=[boot ggplot2 quantreg robustbase shiny sn]; }; + robmixglm = derive2 { name="robmixglm"; version="1.2-1"; sha256="1ikkg5dyyaj0jq7zwg6xdsyvyr9i7cqsv0nkpkj8jgm89g8yisv2"; depends=[actuar bbmle boot doParallel doRNG fastGHQuad foreach MASS numDeriv Rcpp VGAM]; }; + robomit = derive2 { name="robomit"; version="1.0.5"; sha256="15w6ryny42h4kv5lfma8mdhdlk6g4kpinw6rq2bkgympzki37h5z"; depends=[broom dplyr ggplot2 plm tibble tidyr]; }; robotstxt = derive2 { name="robotstxt"; version="0.7.13"; sha256="1x5sachf7g5c2aj1mg3z2lf60723k1ad80bdr89szkgi92jkfal7"; depends=[future future_apply httr magrittr spiderbar stringr]; }; robreg3S = derive2 { name="robreg3S"; version="0.3"; sha256="0rv8qh98wws1f40d1kmysyy9qin0ngsvwq63cnxbwi290wsnrvls"; depends=[GSE MASS robustbase]; }; robregcc = derive2 { name="robregcc"; version="1.1"; sha256="06fapmc3jfrfdqvz02jr12dk1d5iw6s3mcb13jz1nm2bybw6r04a"; depends=[magrittr MASS Rcpp RcppArmadillo]; }; robservable = derive2 { name="robservable"; version="0.2.0"; sha256="05j65ds1yclsa3d7s632wcaylh5ig9w5pwz71ffz5h0f4wgf87jz"; depends=[htmlwidgets jsonlite]; }; + robslopes = derive2 { name="robslopes"; version="1.0.2"; sha256="04767ggjjsgm31ysk5xw8jvdnjdbk4fmrrsi83ksz746kl0xafzp"; depends=[Rcpp RcppArmadillo]; }; robsurvey = derive2 { name="robsurvey"; version="0.1.1"; sha256="0rf2sd7maz565hlgpyhvkswqyck01hif4mg5isbnnky9n3nc98pi"; depends=[survey]; }; robumeta = derive2 { name="robumeta"; version="2.0"; sha256="1ynlfxlzh442jd1cf02j0f948m16d536a30gb4bf7208baqri1vg"; depends=[]; }; robust = derive2 { name="robust"; version="0.5-0.0"; sha256="1ks5scp8bnicl9j1r8yrmz668fjs6ifdmi540zw6d2ck500bbw42"; depends=[fit_models lattice MASS robustbase rrcov]; }; @@ -14060,11 +14618,12 @@ in with self; { robustMVMR = derive2 { name="robustMVMR"; version="0.1.0"; sha256="10cidj5q707xy2x2g0vynbdhz84k6amc3svk3x7rgx4jcv55yr6a"; depends=[ggplot2 lmtest robustbase]; }; robustSingleCell = derive2 { name="robustSingleCell"; version="0.1.1"; sha256="1rxjw5rwp20ssjgq26ajrbipqfjblmsgf87jgx7xa41mgmhwaq51"; depends=[biomaRt cccd dplyr GGally ggplot2 ggpubr ggrepel gplots igraph limma Matrix RANN RColorBrewer Rcpp reshape2 rslurm Rtsne scales]; }; robustX = derive2 { name="robustX"; version="1.2-4"; sha256="02476pl6gnv1sgp5qywlm79gkaxlghms2c1arj4b16r0gz0g230r"; depends=[robustbase]; }; - robustarima = derive2 { name="robustarima"; version="0.2.5"; sha256="0mqlp4xmma74rgwb6rihbzs5nillcnddl6smlxmm8lq1wba27jdj"; depends=[splusTimeDate splusTimeSeries]; }; - robustbase = derive2 { name="robustbase"; version="0.93-6"; sha256="1cr478xi4n9jwsdpbq182a7ig47rpb413q28dz6d1am08sk6657a"; depends=[DEoptimR]; }; + robustarima = derive2 { name="robustarima"; version="0.2.6"; sha256="137x9w3fq523bw2wix7bwc255mq7kvqa047chcnb2prihn9d6as7"; depends=[splusTimeDate splusTimeSeries]; }; + robustbase = derive2 { name="robustbase"; version="0.93-7"; sha256="0mh9d114p3jdrjf8yn4dx5ff41niz5wn411y0ckjcpnazp8d44c9"; depends=[DEoptimR]; }; robustfa = derive2 { name="robustfa"; version="1.0-5"; sha256="04nk5ipml54snsmiqf5sbhx490i46gnhs7yibf4wscrsj1bh2mqy"; depends=[rrcov]; }; robustgam = derive2 { name="robustgam"; version="0.1.7"; sha256="0s1z7jylj757g91najbyi1aiqnssd207jfm9yhias746540qp3kw"; depends=[mgcv Rcpp RcppArmadillo robustbase]; }; - robustlmm = derive2 { name="robustlmm"; version="2.3"; sha256="1rfiz29wy20srwd24ja42fh51ng9vyqrkjbb2dzvsqf663hsf1q0"; depends=[cubature fastGHQuad ggplot2 lattice lme4 Matrix nlme Rcpp RcppEigen robustbase xtable]; }; + robustlm = derive2 { name="robustlm"; version="0.1.0"; sha256="17l2kr9dc3z02b2jswfxal13md4xfpz4sqjfg6kyg6ilab1cfd06"; depends=[MASS matrixStats]; }; + robustlmm = derive2 { name="robustlmm"; version="2.4-3"; sha256="1jmq3ipzhjswgxrg02g2nbldfygk20hdjh9fhnrwidjr98582wab"; depends=[cubature fastGHQuad ggplot2 lattice lme4 Matrix nlme Rcpp RcppEigen robustbase xtable]; }; robustrank = derive2 { name="robustrank"; version="2019.9-10"; sha256="1xikknrmnh95wpvyljdl7v510ddi1g7a88aw3l630s789nq5i02h"; depends=[kyotil]; }; robustrao = derive2 { name="robustrao"; version="1.0-5"; sha256="1r8v9qjx70s8swh09imq9kzdxg0qhnmk00zrg939mig9b12mw1p6"; depends=[doParallel foreach gmp igraph iterpc quadprog]; }; robustreg = derive2 { name="robustreg"; version="0.1-11"; sha256="08c6dyzki68hzl006s12bkjiirlw2n2isirjh8b79sd6zjrjlh72"; depends=[Matrix Rcpp RcppArmadillo]; }; @@ -14074,13 +14633,13 @@ in with self; { rocTree = derive2 { name="rocTree"; version="1.1.1"; sha256="1hd5v47gymffg5829swpd38xscm4vq75d46fibwkrr7jp9iy37ra"; depends=[data_tree DiagrammeR flexsurv ggplot2 MASS Rcpp RcppArmadillo survival]; }; rocc = derive2 { name="rocc"; version="1.3"; sha256="1j15l28c7kv7x850ycjprqi5gpbsl6wfv97h9lbrx11q5l4r9ivb"; depends=[ROCR]; }; roccv = derive2 { name="roccv"; version="1.2"; sha256="18kq2gzcbz97dw168xppql8k3slpkfl8yv1d8ac48damlhvipif1"; depends=[glmnet pROC]; }; - rock = derive2 { name="rock"; version="0.1.1"; sha256="04g831pjbcy2w7lhj0nhqf20ndhywhcafff3gd6inlfkxc3mw33m"; depends=[data_tree DiagrammeR dplyr glue purrr yum]; }; rockchalk = derive2 { name="rockchalk"; version="1.8.144"; sha256="07dp1n155b9gfvk8l30h6bhjbhbylsjxfzns08mryn4mxj3nqpnb"; depends=[carData kutils lme4 MASS]; }; + rockr = derive2 { name="rockr"; version="1.0.0"; sha256="190xaxcbb7miqw5mxyfqqlb2vzacifc8a7a3cqfdlpxra4d4jc25"; depends=[httr jsonlite mime progress]; }; rococo = derive2 { name="rococo"; version="1.1.7"; sha256="1fp3kk5j9kc0vyr50rlbsxjc9p3qz5137sifxsbd297p7zj1fcs2"; depends=[Rcpp]; }; rocsvm_path = derive2 { name="rocsvm.path"; version="0.1.0"; sha256="1pd59bzcz96sxpp725pqa7pjh2gdrfapbilp4wccjkf5290zw56v"; depends=[quadprog svmpath]; }; rodd = derive2 { name="rodd"; version="0.2-1"; sha256="01zrkw4lr21vxk2grfc37iyrcipfdcj5m0i7gnxsvs435y9fqagd"; depends=[Matrix matrixcalc numDeriv quadprog rootSolve]; }; - rodeo = derive2 { name="rodeo"; version="0.7.6"; sha256="040ngsvaqknmhkmm1fnbdqylb58hglgyn4znsrccigx6w8m7qfnp"; depends=[deSolve R6]; }; - rodham = derive2 { name="rodham"; version="0.1.1"; sha256="15mrlx7azvwkwjgfplvs5fhk2nwlg9pay2l99q327p8hx87jr8ra"; depends=[jsonlite plyr splitstackshape stringr tibble]; }; + rodeo = derive2 { name="rodeo"; version="0.7.7"; sha256="1cfsf6sld72bm1343p6fzpfwq7a976basf3fg5fqsj2rcx6b1q7b"; depends=[deSolve R6]; }; + roistats = derive2 { name="roistats"; version="0.1.1"; sha256="1278cap5il85s1qls3sc0f4gqq2hi80442qidnsc6d8r3l4ba3fr"; depends=[dplyr magrittr purrr rlang tidyr]; }; roll = derive2 { name="roll"; version="1.1.6"; sha256="1crzr0kqdls08n6i3769zrxbxvh2m4hv5k3xi6ky6ps8hhicwqc9"; depends=[Rcpp RcppArmadillo RcppParallel]; }; rollRegres = derive2 { name="rollRegres"; version="0.1.3"; sha256="1rf6hdbndindq6kr5yzyqq4jy1c11shfdvjb8mwm957dd0kbs3rx"; depends=[checkmate Rcpp RcppArmadillo]; }; rollbar = derive2 { name="rollbar"; version="0.1.0"; sha256="1q2ym0vkgbdnibxmwx0bp9c20g3bm8fzwwgs3j4bxg1ydg3gnkj4"; depends=[httr]; }; @@ -14094,8 +14653,7 @@ in with self; { rootWishart = derive2 { name="rootWishart"; version="0.4.1"; sha256="1l9pr3i20hi5k02qnlb3blxhlvp2j0njn74xslw3gcjvyzjlr12j"; depends=[BH Rcpp RcppEigen]; }; roots = derive2 { name="roots"; version="1.0"; sha256="1ssmmmrg18xmqxs6f7dqv07357iwcvk21j1gxsl8s9njbj2plxai"; depends=[animation igraph rARPACK]; }; rope = derive2 { name="rope"; version="1.0"; sha256="06qp6h8cjnz0yacm4r39k99hrw74iyq16h5mqfcki7sf3zqbfm7r"; depends=[]; }; - ropenaq = derive2 { name="ropenaq"; version="0.2.11"; sha256="1zqj1bp0rm82znc92kjh1n427n8navjvsc30axay7bpk3gqbxn70"; depends=[crul dplyr jsonlite lubridate magrittr rlang tidyr]; }; - ropenblas = derive2 { name="ropenblas"; version="0.2.8"; sha256="19rnycan5wv6skjjy8dxxh5sn4ngrq9cicz5xzv787ms725nrcby"; depends=[cli fs getPass git2r glue magrittr pingr RCurl rlang rstudioapi stringr withr XML]; }; + ropenblas = derive2 { name="ropenblas"; version="0.2.9"; sha256="0s2cf4clv61m65k353cxgls36jaqrlxzr89jidpr0z3vrda5nb99"; depends=[cli fs getPass git2r glue magrittr pingr RCurl rlang rstudioapi stringr withr XML]; }; ropendata = derive2 { name="ropendata"; version="0.1.0"; sha256="1bv6y241abs6pb4wq5ybx9x4zh72kf8ffs3vlcgdsmhw4jwrsxdl"; depends=[httr jsonlite]; }; ropensecretsapi = derive2 { name="ropensecretsapi"; version="1.0.1"; sha256="0d4yl0h4am3blskdnzk119hk374c3vx0cg99r20w07yh8jfafrw7"; depends=[RCurl RJSONIO]; }; roperators = derive2 { name="roperators"; version="1.1.0"; sha256="0klmk1jmh1iysgf345qa6qyjmn1pkz072ha254k90flprgicg7c6"; depends=[]; }; @@ -14103,27 +14661,27 @@ in with self; { roprov = derive2 { name="roprov"; version="0.1.2"; sha256="16w9i7svlkn2wbv35890f1zpcxilj0ar28d2xrdvmx7ni9vrz61q"; depends=[CodeDepends fastdigest igraph]; }; roptim = derive2 { name="roptim"; version="0.1.5"; sha256="0qcdvs62k9b0dsa68z86yn90ps5aqhxgwg43p2pjml6jjid4rjn9"; depends=[Rcpp RcppArmadillo]; }; roptions = derive2 { name="roptions"; version="1.0.3"; sha256="1rcwzzyzaicvxh8zvqy9wgz5xsixgnizy9i4nh7l33zimm20lsdl"; depends=[ggplot2 plotly purrr]; }; - rorcid = derive2 { name="rorcid"; version="0.6.4"; sha256="0v8h1d5dwx5aafw1dq64b8clhzc0ksnqpy5pfbid9c1f290xk907"; depends=[crul data_table fauxpas httr jsonlite tibble xml2]; }; + rorcid = derive2 { name="rorcid"; version="0.7.0"; sha256="1d0s5w48ksyj152nc4xq5w0nsimab8jc5fgspdwnbas2g8a52igr"; depends=[crul data_table fauxpas httr jsonlite tibble xml2]; }; rorqual_morpho = derive2 { name="rorqual.morpho"; version="0.1.1"; sha256="1475yhb5qwj4zpsc4gqqpzs7qvyddxwc63i1f4rhnv6id2hi4msp"; depends=[dplyr magrittr]; }; rorutadis = derive2 { name="rorutadis"; version="0.4.2"; sha256="13a7xj4qw1nd8xgrqhrki3php960lgy9gy38sg4kpvs4j2rwijzc"; depends=[ggplot2 gridExtra hitandrun Rglpk]; }; - rosetta = derive2 { name="rosetta"; version="0.3.1"; sha256="1vx9x5wqbm3mrw6qfb1ayqsx9qkk59mrx4f2y6s0xg0znqyczxfn"; depends=[car diptest ggplot2 ggrepel gridExtra kableExtra knitr lavaan lme4 multcompView pander plyr psych pwr rio rmdpartials ufs]; }; + rosetta = derive2 { name="rosetta"; version="0.3.6"; sha256="1f3wmngx8k3b99qgzy7lzm5pgqk4rmkw1pfhk5a9vhlsibik8h27"; depends=[car diptest ggplot2 ggrepel gridExtra kableExtra knitr lavaan lme4 multcompView pander plyr psych pwr rio rmdpartials ufs viridis]; }; rosetteApi = derive2 { name="rosetteApi"; version="1.14.4"; sha256="166p3dvib0xpvhkb92b3imassv1b9mrblz2m05jai2nzlz0q7hzk"; depends=[httr jsonlite]; }; rosm = derive2 { name="rosm"; version="0.2.5"; sha256="10n3yzhk29i3mzbcg6nkjqgvwc9n53ax0d7imn9l4a9msa06as07"; depends=[abind curl jpeg plyr png prettymapr rgdal rjson sp]; }; rospca = derive2 { name="rospca"; version="1.0.4"; sha256="1pxm34xsc2610n0i6dwcm4rhn016yqb03f8vrm93r7285c04n4q7"; depends=[elasticnet mrfDepth mvtnorm pcaPP pracma robustbase rrcov rrcovHD]; }; - rotasym = derive2 { name="rotasym"; version="1.0.9"; sha256="06z8faj61ylb8x898yqx8g8n784hb26cgrwb7yscqc68wd042bwg"; depends=[Rcpp RcppArmadillo]; }; + rotasym = derive2 { name="rotasym"; version="1.1.0"; sha256="1h5wg87p6svmwzlw58by2rp5cxw0bgq6cp48g9z1ajcpy048591n"; depends=[Rcpp RcppArmadillo]; }; rotationForest = derive2 { name="rotationForest"; version="0.1.3"; sha256="1z2wk3mcs5hrahsxralidbc0dd8gxdbwjpr2f71g4g3isfx1ic8d"; depends=[rpart]; }; - rotations = derive2 { name="rotations"; version="1.6.1"; sha256="175bbwj1bf58gwsw3721dsh8lsika5aqv787kfyjx041m4lar4zv"; depends=[ggplot2 gridExtra Rcpp RcppArmadillo rgl sphereplot]; }; + rotations = derive2 { name="rotations"; version="1.6.2"; sha256="1r42lgy4f6mblz29hvy7s166yk2s4k8x03snh7yy97g7falmh718"; depends=[ggplot2 gridExtra Rcpp RcppArmadillo sphereplot]; }; rotl = derive2 { name="rotl"; version="3.0.11"; sha256="0b0wr795qicb8k1m4ng0kx9alc88davhdr3kar4ynjblaavz16rk"; depends=[ape assertthat httr jsonlite rentrez rncl]; }; rotor = derive2 { name="rotor"; version="0.3.5"; sha256="0rpa24yh72r6sv5xxyia9p8f8c51cfblprb4srrjk2y0fgz5h33i"; depends=[dint R6]; }; - round = derive2 { name="round"; version="0.12-2"; sha256="1kq06q2mbjid8icwahm02za2zp7519cwllx76ch76jyxhmrypcgg"; depends=[]; }; + round = derive2 { name="round"; version="0.20-0"; sha256="1c403i57fwfh3pz6ksg5ws2fydq8zf2fk4x6r9d0xqn0fs7px7j4"; depends=[]; }; roundhouse = derive2 { name="roundhouse"; version="0.0.2"; sha256="0xx2wai9pdq0g7x8xmwlf48wxv4v18c7ymzvzxpvw1gggppmbk69"; depends=[]; }; routr = derive2 { name="routr"; version="0.4.0"; sha256="1vswq7vm80nwb50grr4cs290kbq5lx9b19dq0c2wlp9d2dxk50si"; depends=[assertthat digest httpuv R6 reqres stringi uuid]; }; - roxut = derive2 { name="roxut"; version="0.2.23"; sha256="1pn2invp7brmdvxzi21hi1pc5nss6d02k2nqps73i0yq7brzc7m2"; depends=[roxygen2]; }; + roxut = derive2 { name="roxut"; version="0.2.40"; sha256="1j3viqs8miigc6n6fdmm0bci84lajqcra3d5qm7pd6n2wcpvh7nh"; depends=[roxygen2]; }; roxygen2 = derive2 { name="roxygen2"; version="7.1.1"; sha256="0qc8akwfwmaqsjaza87f5fi0zk6sh3l6j3assbs6chvx0gnmvidx"; depends=[brew commonmark desc digest knitr pkgload purrr R6 Rcpp rlang stringi stringr xml2]; }; roxygen2md = derive2 { name="roxygen2md"; version="1.0.0"; sha256="1gvrfy0sk5qi8d93zxj5f7xgnnw0w38zyxdik4ckf0pkk0zdm27a"; depends=[desc devtools enc rex rlang tibble usethis withr]; }; roxytest = derive2 { name="roxytest"; version="0.0.1"; sha256="166m0pklgryh3vildg0bvzh9gs3p71sf61ivgkvkvyy9vhvnp3jf"; depends=[roxygen2]; }; royston = derive2 { name="royston"; version="1.2"; sha256="1rywc89qzx0hldbq10201bjdhz60pq2gmgd9b9j52mza3w4canjz"; depends=[moments nortest]; }; - rpact = derive2 { name="rpact"; version="3.0.3"; sha256="04hv2lzh0b49is9n2kwjbfh2jm6723n2lf132n0gijxc510mbdxi"; depends=[Rcpp]; }; + rpact = derive2 { name="rpact"; version="3.0.4"; sha256="0d1qg0sgf366irpi3022vivrj04bp68zw8idfknr4r3lq6ym7h7s"; depends=[Rcpp]; }; rpanel = derive2 { name="rpanel"; version="1.1-4"; sha256="0yzasb4k5jcx3wfsll9k9alyrwc0l1x6pk91nj7cqrdiapw8j519"; depends=[]; }; rpart = derive2 { name="rpart"; version="4.1-15"; sha256="0p5frya963ppn476p5dxs2mnarsalksr6gw9zzmjsn8ikq7bx3ib"; depends=[]; }; rpart_LAD = derive2 { name="rpart.LAD"; version="0.1.2"; sha256="1v1arv5b02n0jvyifb5km9w3z3wxg9x9g3g4xck4s319z5g6lp7n"; depends=[Rcpp rpart]; }; @@ -14135,16 +14693,15 @@ in with self; { rpca = derive2 { name="rpca"; version="0.2.3"; sha256="135q3g8jmn9rwamrc9ss45cnbfyw8kxcbrf0kinw8asz70fihj9z"; depends=[]; }; rpcdsearch = derive2 { name="rpcdsearch"; version="1.0"; sha256="17g3x15qgv2hamlj451sb88i83n8svw5vnmjpijp5cnn5d1jx0d6"; depends=[assertthat combinat dplyr stringr xlsx]; }; rpdo = derive2 { name="rpdo"; version="0.3.1"; sha256="0yhg858i5a6s68000a74l4gldycbfmcwcvkk5zhjqzpxzdm7pqb2"; depends=[chk lifecycle]; }; - rpf = derive2 { name="rpf"; version="1.0.5"; sha256="0kz7i7g3l16irz6bxgnkxdmmd931m1fk6rl72dvs21ir5brr010l"; depends=[lifecycle mvtnorm Rcpp RcppEigen]; }; - rpg = derive2 { name="rpg"; version="1.6"; sha256="1vn5cswrkmw98z1dr0f0yjkz3n8kwvjb4zknqg81fzqsagfc89yx"; depends=[getPass RApiSerialize Rcpp uuid]; }; + rpf = derive2 { name="rpf"; version="1.0.7"; sha256="04n605h091d6nijbbhar79zj7gfkymb6pp7v1496avzajy483klw"; depends=[lifecycle mvtnorm Rcpp RcppEigen]; }; rphylopic = derive2 { name="rphylopic"; version="0.3.0"; sha256="088aafylypsaxfl903qhi8kigkchmdzndibxic4sgiycry6xvxrz"; depends=[crul ggplot2 gridBase jsonlite png]; }; rpicosat = derive2 { name="rpicosat"; version="1.0.1"; sha256="1zj2d6jairmvya91vhv9kpkf34zmzl9vlha5yvfjj0j0apmqc0li"; depends=[]; }; rpinterest = derive2 { name="rpinterest"; version="0.3.1"; sha256="0kkf73byhgzqxw85wda3nh7qsq81pc035vi6z3fhnvb9ssszwakc"; depends=[httr magrittr rjson]; }; rpivotTable = derive2 { name="rpivotTable"; version="0.3.0"; sha256="0ndhsw4nnz6wf0v8dh4sz8867m01jjkzw6aq7f490z1ypa3d9fv5"; depends=[htmlwidgets]; }; - rplos = derive2 { name="rplos"; version="0.9.0"; sha256="104vwyf9lz2d07dlxpg1ivvp8q6bqq4jszrhdsy0y2qbi97424br"; depends=[crul dplyr ggplot2 jsonlite lubridate plyr reshape2 solrium whisker]; }; + rplos = derive2 { name="rplos"; version="1.0.0"; sha256="0gl336cqy96npkkh9g6gsaqyyk1sn93xbybv09lm8xih36qlr0b0"; depends=[crul dplyr ggplot2 jsonlite lubridate plyr reshape2 solrium whisker]; }; rplotengine = derive2 { name="rplotengine"; version="1.0-7"; sha256="1bbciq84l0h6g4qajlcqg3v66g2rspflv6k7x5h5qzwlcb4p4dps"; depends=[xtable]; }; rpls = derive2 { name="rpls"; version="0.6.0"; sha256="0r3y63pi4d7hfzs53d9w23ymmk86gvm85v0dx7n1gicha5nn1mk8"; depends=[pcaPP robustbase]; }; - rplum = derive2 { name="rplum"; version="0.1.5.1"; sha256="0w2dp2g5r88xdh3kw8wvis7gf3c9vmzx1byyar75j68xka1mqqyb"; depends=[coda Rcpp]; }; + rplum = derive2 { name="rplum"; version="0.2.0"; sha256="1wjfzhds355fsmdyzkvcdr501p1cjarh9dscx5d2f4nvj07mn5b9"; depends=[coda rbacon Rcpp]; }; rpmodel = derive2 { name="rpmodel"; version="1.0.4"; sha256="1rbygxk6dbi3pqxri5myc7f3y04haa0slpiaa330malg3dw5a9gc"; depends=[rlang]; }; rpms = derive2 { name="rpms"; version="0.4.0"; sha256="10zw0xln0vjrzrilyn67nnw13aadnskzca1930fvb483c691bm36"; depends=[Rcpp RcppArmadillo]; }; rpnf = derive2 { name="rpnf"; version="1.0.5"; sha256="07byg0ym4d2cr6fp74z379jhsaw4c0xrwf622dvhwa4frn4anl60"; depends=[]; }; @@ -14154,7 +14711,7 @@ in with self; { rppo = derive2 { name="rppo"; version="1.0.1"; sha256="182na7mcvgjqbna3v5hw58z6q9k8n0987b8ipz0d138zxaq45474"; depends=[httr jsonlite plyr readr]; }; rpql = derive2 { name="rpql"; version="0.8"; sha256="0iljs08pjnk4b08mgryzn70rxva723bk1hi3wyizx05lls2n8ly7"; depends=[gamlss_dist lme4 MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; rpredictit = derive2 { name="rpredictit"; version="0.0.2"; sha256="1gsfcs5l83p4x0glhnq5hidh5rxwipklsj0nzkxaim65w9kqgx30"; depends=[dplyr DT dygraphs httr jsonlite magrittr quantmod shiny stringr xts]; }; - rprev = derive2 { name="rprev"; version="1.0.4"; sha256="1dzqbvfx3fcgfz3b18wwaaprvp0szjfshm8dgmj3r4vyzx71v9lv"; depends=[data_table dplyr ggplot2 lazyeval lubridate magrittr survival tidyr]; }; + rprev = derive2 { name="rprev"; version="1.0.5"; sha256="0494z0049rxahs4ndjlclzfc65k304a1m01cdlhjg4rz1gc1vrr8"; depends=[data_table dplyr ggplot2 lazyeval lubridate magrittr survival tidyr]; }; rprime = derive2 { name="rprime"; version="0.1.2"; sha256="1h54vclc800pir3vxqcq4cmmxy9fcar1fydqmba2dzpj8dvlad7v"; depends=[assertthat plyr stringi stringr]; }; rprintf = derive2 { name="rprintf"; version="0.2.1"; sha256="0rwqpln0igxb4m6d6jyp7h3shfb8sbp0kj7cgkffjp88hn9qm4h3"; depends=[stringi]; }; rprojroot = derive2 { name="rprojroot"; version="2.0.2"; sha256="07wy07yhms8zln9qb0iwx69dq08h4lrdi8kavjcplfxcskq638az"; depends=[]; }; @@ -14169,11 +14726,11 @@ in with self; { rr = derive2 { name="rr"; version="1.4"; sha256="1c2h6ibjfwrjfqh1if3c90pdh0g2rf3p71j4p9w23xbbrx2l80pl"; depends=[arm coda magic MASS]; }; rr2 = derive2 { name="rr2"; version="1.0.2"; sha256="099vjg91ni2bnxlra18pvgsvzrl28zrj639cdjrh3wkpqv99d04q"; depends=[ape lme4 Matrix nlme phylolm]; }; rrBLUP = derive2 { name="rrBLUP"; version="4.6.1"; sha256="1ny48ra25rzx3k69pmzpd31ka2zhqyqiq1v7ann862j3ris0w8z9"; depends=[]; }; - rrapply = derive2 { name="rrapply"; version="1.2.1"; sha256="0f5b96bhisksdxiy7d1ph9ff7k85qdzd5xb2y6m19q0k14mkxini"; depends=[]; }; + rrapply = derive2 { name="rrapply"; version="1.2.3"; sha256="042b7q94lrprxxcyjw8cn3y20dxvq77yk0cihn2xk885gawhwxm6"; depends=[]; }; rrat = derive2 { name="rrat"; version="1.0.0"; sha256="1j1jd32pgggn5cqv66l63sw5p4hblgpznf33wd0zdbfapwy8rx4r"; depends=[quantreg]; }; rrcov = derive2 { name="rrcov"; version="1.5-5"; sha256="0ag6q16ajkqwj28dk9vp4xkvqw26fqqqdxnz38gpszilirahfzqz"; depends=[lattice mvtnorm pcaPP robustbase]; }; rrcov3way = derive2 { name="rrcov3way"; version="0.1-18"; sha256="1gpjmmdca2waqks0qykj59p50v6pf1zgl81m5lhbrhpcr4rdr63l"; depends=[nnls robustbase rrcov]; }; - rrcovHD = derive2 { name="rrcovHD"; version="0.2-6"; sha256="03dr42np7a0yl3hi2iz4xp5b6yrazx6vlsjrby6fcn9r8y1fmac9"; depends=[pcaPP pls Rcpp robustbase robustHD rrcov spls]; }; + rrcovHD = derive2 { name="rrcovHD"; version="0.2-7"; sha256="1srxgw5qcgpmxqfplvbrlryxvkx0mic5y7v5lxgfvqvlmcb3rm3f"; depends=[pcaPP pls Rcpp robustbase robustHD rrcov spls]; }; rrcovNA = derive2 { name="rrcovNA"; version="0.4-15"; sha256="0r60chxm7bpc6sis60rp8k8xchwfrfa3lrfaidvv22ipx2q0psp7"; depends=[cluster lattice norm robustbase rrcov]; }; rrd = derive2 { name="rrd"; version="0.2.2"; sha256="104iz2y49vzm92a8nrvgzrjyljxl467mp1hjnjmzl4rhf9kl809y"; depends=[assertthat tibble]; }; rrecsys = derive2 { name="rrecsys"; version="0.9.7.3.1"; sha256="1qnjriv1xq4gjjhzz8jxrbk88mw5xddl2l2i4bmfhnxhi51d2rk3"; depends=[ggplot2 knitr MASS Rcpp registry]; }; @@ -14193,17 +14750,17 @@ in with self; { rrtable = derive2 { name="rrtable"; version="0.2.1"; sha256="1hblrxn7vixcp32j3cij0xrkzvk31agi9dqgxrimcrzs7gjcd1j5"; depends=[devEMF editData flextable ggplot2 ggpubr magrittr moonBook officer purrr readr rlang rmarkdown rvg shiny shinyWidgets stringr ztable]; }; rrum = derive2 { name="rrum"; version="0.2.0"; sha256="0w0f2n14if2b8x7n6v8y8q2vghd8j7xm1xhpxnvy3z50flinwgm7"; depends=[Rcpp RcppArmadillo rgen simcdm]; }; rsae = derive2 { name="rsae"; version="0.1-5"; sha256="1f3ry3jwa6vg2vq2npx2pzzvfwadz8m48hjrqjk860nfjrymwgx5"; depends=[]; }; - rsample = derive2 { name="rsample"; version="0.0.8"; sha256="1psmxk16d4bz1v05x0gb9hn4brkdjxw8hjbxmj62snichnix3q3i"; depends=[dplyr ellipsis furrr generics modeldata purrr rlang slider tibble tidyr tidyselect vctrs]; }; + rsample = derive2 { name="rsample"; version="0.0.9"; sha256="03qwsvylgmj2a2h764mzy0x57pgzmvjvl0ypmbn4lcf912bvrd2c"; depends=[dplyr ellipsis furrr generics purrr rlang slider tibble tidyr tidyselect vctrs]; }; rsatscan = derive2 { name="rsatscan"; version="0.3.9200"; sha256="00vgby24jknq8nl7rnqcwg7gawcxhwq8b7m98vjx2hkqx39n4g21"; depends=[foreign]; }; rsbp = derive2 { name="rsbp"; version="0.1.0"; sha256="0aardngvj9apn8q5vhfpv67rf7d5iqb7xdq7rh8xmgr8341fvbgc"; depends=[dplyr lubridate magrittr purrr reshape2 tibble tidyr xml2]; }; rscala = derive2 { name="rscala"; version="3.2.19"; sha256="1wq0wrdbh0gi0bx4m9526qlbjm7nxxqgc17ikdx5mrhcy2f61hjk"; depends=[]; }; rscimark = derive2 { name="rscimark"; version="1.0"; sha256="1jsjz4d5bnxb90qqzz42m4nyvm8d8w8bs0m1r5g2n78zmckqb8vy"; depends=[checkmate]; }; - rsconnect = derive2 { name="rsconnect"; version="0.8.16"; sha256="05ii0p0p7xpf8z0c1594s5q7wpwcs7lmlddrd67s5p2ka5m8qwiz"; depends=[curl digest jsonlite openssl packrat rstudioapi yaml]; }; + rsconnect = derive2 { name="rsconnect"; version="0.8.17"; sha256="0cd2bpc22jam1qxn6yg7yr7xdhsm0jgnm5bm2f3vg5b3c96plxk4"; depends=[curl digest jsonlite openssl packrat rstudioapi yaml]; }; rscontract = derive2 { name="rscontract"; version="0.1.2"; sha256="0gn0xcvg9nj6m97g4si6bgmgaj6hxpicz8yig7n84jnczh6w510x"; depends=[]; }; rscopus = derive2 { name="rscopus"; version="0.6.6"; sha256="0kl6rv0j2396b8izvy0lp1f588il6w3yhq6d4swv8x8z14rsgcpw"; depends=[dplyr glue httr jsonlite plyr tidyr]; }; - rscorecard = derive2 { name="rscorecard"; version="0.17.0"; sha256="0h574fvqfx3i23xh454xg6fk75m9pzpqhpk87c22qs3jvxv757sv"; depends=[dplyr httr jsonlite lazyeval magrittr purrr tidyr tidyselect]; }; + rscorecard = derive2 { name="rscorecard"; version="0.18.0"; sha256="1y53cg296lna3fmqm31mbvfcwylxkwb981799irzg2l9gfqv1rrg"; depends=[dplyr httr jsonlite lazyeval magrittr purrr tidyr tidyselect]; }; rsdepth = derive2 { name="rsdepth"; version="0.1-5"; sha256="064jbb6gnx0sm41w3sbi6mvsbzsfkjqfici6frk8sfm9ybvm591j"; depends=[]; }; - rsdmx = derive2 { name="rsdmx"; version="0.5-14"; sha256="1b4x87h8kfw8yhmfsjf9l1i0afr7bgvyp5a369m5gn6m07dvlbp9"; depends=[plyr RCurl XML]; }; + rsdmx = derive2 { name="rsdmx"; version="0.6"; sha256="1sw8pp2j22rs1nlsyphyqbhywgplan9qmrs5wm9wvrn5g26k4bg9"; depends=[httr plyr R6 XML]; }; rseedcalc = derive2 { name="rseedcalc"; version="1.3"; sha256="18zmpjv6g8f7pmvqlp6khxyys9kdnq5x4zxwb6gwybsh4jxrymkp"; depends=[]; }; rsem = derive2 { name="rsem"; version="0.5.0"; sha256="1xlk83ivmk8wm6mdmmwvv2z39r6scswgmsmy6dd4qbc3kiqn8cqm"; depends=[lavaan MASS]; }; rsetse = derive2 { name="rsetse"; version="0.4.0"; sha256="1mas970p93r0jhxnm1q0sb080k2hh5sxq5q5vrwbj5csxg3c029a"; depends=[dplyr igraph magrittr Matrix minpack_lm purrr rlang tibble]; }; @@ -14213,19 +14770,19 @@ in with self; { rskey = derive2 { name="rskey"; version="0.4.4"; sha256="1la3apypp1kk425r753vqwm3nk9zmynp9gix6db0ckkssw0fjxpw"; depends=[berryFunctions rstudioapi]; }; rsleep = derive2 { name="rsleep"; version="1.0.3"; sha256="11r32xxqdi0cvx67x8yrb4c36c73mgdy18sayg18cnsqb9qhxvyz"; depends=[edfReader ggplot2 jsonlite phonTools psd signal]; }; rslp = derive2 { name="rslp"; version="0.2.0"; sha256="186k1gngirqhvhii4ysq77wjf5gf75c7gya73minb0pfg9fn16l7"; depends=[magrittr plyr stringi stringr tokenizers]; }; - rslurm = derive2 { name="rslurm"; version="0.5.0"; sha256="0dpxglcsqa2k0nak10515ga13c46rb4mrbpbr3gv7xckg6347zqg"; depends=[whisker]; }; + rslurm = derive2 { name="rslurm"; version="0.6.0"; sha256="0fn2na8prsaxa03x5wi3105gpsxc35qvgmik7wy3nylvx4wdfv9g"; depends=[whisker]; }; rsm = derive2 { name="rsm"; version="2.10.2"; sha256="0709jbhliajll3cw0g0dj368mxmpv0n1yv98pq3b7wcq8bxnqi36"; depends=[estimability]; }; - rsmatrix = derive2 { name="rsmatrix"; version="0.1.1"; sha256="1g3s1mbv3fvy42cszf33v9kjxl2zxcnjkrmdg5i55fl478x9jfpi"; depends=[Matrix]; }; + rsmatrix = derive2 { name="rsmatrix"; version="0.1.2"; sha256="1f1q2msjl6yhid64rf46v1vvvkb730n8qh7illsm5jipnmcdr9a6"; depends=[Matrix]; }; rsnps = derive2 { name="rsnps"; version="0.4.0"; sha256="0ppv64yj1nh13q4lks6djrjc37b32qj5pyddy1lfcy066ah63km6"; depends=[crul data_table httr jsonlite plyr RJSONIO stringr]; }; rsoi = derive2 { name="rsoi"; version="0.5.4"; sha256="1gchznfshp91i3if8077qph26flxzwa2xrw3q488ah50725d63hw"; depends=[curl memoise]; }; - rsolr = derive2 { name="rsolr"; version="0.0.10"; sha256="0dmn35j3m7aw9x70x5ngs6jrb3d1jamlajr4wz46xgfdl1c3y7gz"; depends=[BiocGenerics graph RCurl restfulr rjson S4Vectors XML]; }; + rsolr = derive2 { name="rsolr"; version="0.0.11"; sha256="0h82x9ihzgw9l1ksn1l5w7x3vgyy6zlbdbvg9a4pa1iinhlf87ic"; depends=[BiocGenerics graph RCurl restfulr rjson S4Vectors XML]; }; rspa = derive2 { name="rspa"; version="0.2.5"; sha256="0jvrr3jaw66zqi5pal9dycpac24dn9v7lf2m63q01wmd8m3mlnv9"; depends=[lintools validate]; }; rsparkling = derive2 { name="rsparkling"; version="0.2.19"; sha256="1rb43lslhlg8jpniirzch8gnl86x6d3shcfp9fpxm0qd3fqrlm6z"; depends=[h2o sparklyr]; }; rsparse = derive2 { name="rsparse"; version="0.4.0"; sha256="1blg59gsidh0sn6yy761pisz2phml0hzgqc24s5s8q9q903rddr9"; depends=[data_table float lgr Matrix Rcpp RcppArmadillo RhpcBLASctl]; }; rspiro = derive2 { name="rspiro"; version="0.2"; sha256="1gjil39ib9p86a7r3i03h01x2dsc9y283rnp65xvavrzmmgz87b4"; depends=[]; }; rsppfp = derive2 { name="rsppfp"; version="1.0.4"; sha256="123yv54i58xj4wx9n08qp50mm4l271fm1zhzimrxx22wn2bg8zy5"; depends=[doParallel dplyr foreach igraph stringr tidyr]; }; - rsq = derive2 { name="rsq"; version="2.1"; sha256="1k1p21p9511vxv5zxcv4j7dvrd8f7z7wlsv7zpn961i9d18z75y2"; depends=[Deriv lme4 MASS Matrix nlme]; }; - rstac = derive2 { name="rstac"; version="0.9.0"; sha256="1qz1pc054fc2adgl1ih0z6fs4wfnw8a9sycyrw4ag7990ibz606p"; depends=[crayon httr jsonlite magrittr]; }; + rsq = derive2 { name="rsq"; version="2.2"; sha256="1hjzk5mvva4b0r2r8bisg915iz32aiynp8w57d2xikdfb90nw5h0"; depends=[Deriv lme4 MASS Matrix nlme]; }; + rstac = derive2 { name="rstac"; version="0.9.1"; sha256="0k6w5h0qgw0z02sap6jnirjpzgi0vk6gr84jwpikw1vc6g7jmpsg"; depends=[crayon httr jsonlite magrittr]; }; rstack = derive2 { name="rstack"; version="1.0.0"; sha256="19vbfmkd6ymadah1y1w5rn52f4hviddccyc6qj2cv5viqwbwws2z"; depends=[R6]; }; rstackdeque = derive2 { name="rstackdeque"; version="1.1.1"; sha256="0i1qqbfj0yrqbkad8bqc1qlxmyxpn7zycbnq83cdmfbilcmi87ql"; depends=[]; }; rstan = derive2 { name="rstan"; version="2.21.2"; sha256="0jh58qfrksd2j9w2zy4bajryivgp36m3xdb9mjrjqbk1ib9h83p3"; depends=[BH ggplot2 gridExtra inline loo pkgbuild Rcpp RcppEigen RcppParallel StanHeaders V8 withr]; }; @@ -14233,33 +14790,36 @@ in with self; { rstanemax = derive2 { name="rstanemax"; version="0.1.3"; sha256="0myxcqwpk4zq5y1ri14rbsbb19kr8g7fd3mfdsn8vh2yi5xlcqk1"; depends=[BH dplyr ggplot2 magrittr purrr Rcpp RcppEigen rstan rstantools StanHeaders tidyr]; }; rstantools = derive2 { name="rstantools"; version="2.1.1"; sha256="0b9x8rzj3dr4m7yjx476nn42z22xd1xnw85m9frfwxy5ivg1any9"; depends=[desc Rcpp RcppParallel]; }; rstap = derive2 { name="rstap"; version="1.0.3"; sha256="176z39k54l5r60md6wziz828c46alv2pmqivvmhvb358crrb8x7n"; depends=[abind bayesplot BH dplyr ggplot2 lme4 loo Matrix nlme pracma Rcpp RcppEigen rstan rstantools StanHeaders]; }; - rstatix = derive2 { name="rstatix"; version="0.6.0"; sha256="0nwwvxwr4z3j4n9z8cnvwghppc836g47n0ia98chk272qwh8xcpb"; depends=[broom car corrplot dplyr generics magrittr purrr rlang tibble tidyr tidyselect]; }; + rstatix = derive2 { name="rstatix"; version="0.7.0"; sha256="0330y8iziffqg8j9j5h9zv4qcdyf8ybhmzxrr9fzq9nc6bf1gbm5"; depends=[broom car corrplot dplyr generics magrittr purrr rlang tibble tidyr tidyselect]; }; rstatscn = derive2 { name="rstatscn"; version="1.1.3"; sha256="07w7ixq1faq7mif2ksxcgl8n6ali9h0wx0nb2yz4kbdgvz68r7b9"; depends=[httr jsonlite]; }; rstiefel = derive2 { name="rstiefel"; version="1.0.0"; sha256="0g09fpp3432v78gqgn0hiva6zqr8yqn379wz4428wanmiskqr3f0"; depends=[]; }; - rstpm2 = derive2 { name="rstpm2"; version="1.5.1"; sha256="0p1zqqjss8i5wca4qvr56d6p9ak20ki4cfbxja1wrhkp4kii29r6"; depends=[bbmle deSolve fastGHQuad mgcv Rcpp RcppArmadillo survival]; }; + rstoat = derive2 { name="rstoat"; version="1.0.0"; sha256="0chlkvdxkwa8fr1kh3rasph5x837v39jwjvwwcwf6fvqmfbgmfpn"; depends=[curl httr jsonlite keyring]; }; + rstpm2 = derive2 { name="rstpm2"; version="1.5.2"; sha256="0c6l3z250b2kn6mh2xyb0bd2y5nsbj11n9xfi51dac9s8xq3v7m4"; depends=[bbmle BH deSolve fastGHQuad mgcv Rcpp RcppArmadillo survival]; }; rstream = derive2 { name="rstream"; version="1.3.6"; sha256="1mr869hff5wdpw6a7x71366y8dxf9vljbb11fssfkhcf7hm2ipnj"; depends=[]; }; rstudioapi = derive2 { name="rstudioapi"; version="0.13"; sha256="12vdfzzjc6mv4h105l8cp108j3hjk0mqmg23m6mqr3jarfymphxa"; depends=[]; }; - rsubgroup = derive2 { name="rsubgroup"; version="1.0"; sha256="1151w8lzsj3w7k56gdry44g9a8a1iqh5m0srd6mydzdxaj90q2pc"; depends=[foreign rJava]; }; + rsubgroup = derive2 { name="rsubgroup"; version="1.1"; sha256="16glxyv6aja7j0vfjccfi8w84wzm2ajfl62l0g5vpl73j7cs6gnk"; depends=[foreign rJava]; }; rsurface = derive2 { name="rsurface"; version="1.1.0"; sha256="1pymbgvr72nqd66wap5wrcizzx2k9bfr6vkxv6dkvjmi8q7jl2gv"; depends=[plotly rsm]; }; rsurfer = derive2 { name="rsurfer"; version="0.2"; sha256="14zd8fhak12yha6miwb84085722v5ipk8lagijhc6af291kp70i9"; depends=[gdata stringr]; }; - rsvd = derive2 { name="rsvd"; version="1.0.3"; sha256="1fvrw46fl5xb2akaa4mp8nja4h7nn4bdhnjdrk22fsdfqc7hwmhk"; depends=[Matrix]; }; - rsvg = derive2 { name="rsvg"; version="2.1"; sha256="0bxnwa9sbzx6jlxrzh3ymjq81vkxil2qx7kk7wp13a0cql7dhxcn"; depends=[]; }; - rsyncrosim = derive2 { name="rsyncrosim"; version="1.2.4"; sha256="1m8nmw5jq69zgzgjvr7f03skvrry0w4lcf1yg64viaggvm9qyysf"; depends=[DBI raster RSQLite]; }; + rsvd = derive2 { name="rsvd"; version="1.0.5"; sha256="07p2hjmpcwcsang8z9sjkpy94rydcin7m3hyvcgzgm5cd6w8c1p4"; depends=[Matrix]; }; + rsvg = derive2 { name="rsvg"; version="2.1.2"; sha256="10p6aps2rsvhf4xgngl9x20cf2wqbzhlpjds8biyihvj58c1q8nn"; depends=[]; }; + rsyncrosim = derive2 { name="rsyncrosim"; version="1.2.9"; sha256="0hjlgqd4fzsbhh1vrg35kd536d721svg6856npb26zsyvza6nyaj"; depends=[DBI raster RSQLite]; }; rsyntax = derive2 { name="rsyntax"; version="0.1.1"; sha256="1z0wy1rfqdb9nfmrprqjsdjx1isn484r8ahp7x24ncql9snngia8"; depends=[base64enc data_table digest igraph magrittr png rlang stringi tidyselect tokenbrowser]; }; rsyslog = derive2 { name="rsyslog"; version="1.0.1"; sha256="1i33bpv894jk7cixsvn85h1g532zj39f8dfqq8cyzgsav9wba2y4"; depends=[]; }; rt = derive2 { name="rt"; version="1.0.1"; sha256="1l04rx5cvg3sxff4i22bnckljq0rr6jld7dd3kpirdj8psak70id"; depends=[httr stringr]; }; rt_test = derive2 { name="rt.test"; version="1.18.7.9"; sha256="0ywkdjvfzmrmmsfkz4jbhwzbzv7wivx80xy8wr92dch1862h6ias"; depends=[]; }; rt3 = derive2 { name="rt3"; version="0.1.2"; sha256="1fqbymkz4csavkxrs26glzrh0kw3qy9x5smgddgda9a1dxh9ljkm"; depends=[]; }; + rtables = derive2 { name="rtables"; version="0.3.6"; sha256="0yc9jv3xfan4ai8xf2vv7bmy7wg1q2jl4l0iazv8byxlklfafwhl"; depends=[htmltools magrittr]; }; rtape = derive2 { name="rtape"; version="2.2"; sha256="0q7rs7pc1k1kayr734lvh367j5qig2nnq5mgak1wbpimhl7z3wm7"; depends=[]; }; rtdists = derive2 { name="rtdists"; version="0.11-2"; sha256="0fap15bkxn2azd5a4j3q9mxpif5ff3y2vb8rm4xnh8l0sl1lw7cs"; depends=[evd gsl msm Rcpp]; }; rtematres = derive2 { name="rtematres"; version="0.2"; sha256="1d0vrprvnlk4hl2dbc6px9xn9kx9d1qvlqxd798hzda6qg5wwvf2"; depends=[gdata plyr RCurl XML]; }; rtemps = derive2 { name="rtemps"; version="0.8.0"; sha256="1x64j13g1lv0s7yy1b4453l7xnscgf079hkgkp8dv9c38g0mfx98"; depends=[bookdown DT ggplot2 knitr rmarkdown xfun]; }; - rtext = derive2 { name="rtext"; version="0.1.21"; sha256="0j2jfz0mz9552dwa78d527lxipmj5ql8q8np8qq5jw4ka6wj5lbs"; depends=[digest hellno magrittr R6 Rcpp RSQLite stringb]; }; + rtern = derive2 { name="rtern"; version="0.1.1"; sha256="00yhsns89jynh2gpgwwklkf0pbwcriha76ff3sh7pb5n6hl5nr1c"; depends=[lifecycle]; }; + rtext = derive2 { name="rtext"; version="0.1.22"; sha256="0wsy0iqzbfin92pw0bqj4bxm2p4f2y4frr137l6c3yvd0jrax3q4"; depends=[digest hellno magrittr R6 Rcpp RSQLite stringb]; }; rtf = derive2 { name="rtf"; version="0.4-14.1"; sha256="032ff0yavqmd2d9svgwkmvxwh0cxjbac6pj48v4cshi898f02rhh"; depends=[R_methodsS3 R_oo]; }; - rticles = derive2 { name="rticles"; version="0.17"; sha256="1wbwva5n88dw3vvhcrlzkr58cv03hyx0dqgfmxj7d0dgf4ichr3c"; depends=[knitr rmarkdown tinytex xfun yaml]; }; + rticles = derive2 { name="rticles"; version="0.19"; sha256="1zcj5y54z1max1df9j2iclm6zlcic4wj684y18wcnmmdwfs51818"; depends=[knitr rmarkdown tinytex xfun yaml]; }; + rticulate = derive2 { name="rticulate"; version="1.7.2"; sha256="0xgl36m63z9kzqj0srjp3lb65hfizszlgw0kwjwc9li607q4fy6m"; depends=[dplyr ggplot2 glue magrittr mgcv purrr readr rlang stringr tibble tidymv tidyr tidyselect tidyverse]; }; rtide = derive2 { name="rtide"; version="0.0.8"; sha256="0q3fcxxlipj12128p25h5hg92snimlpan86q9bncp20sz1skrwzx"; depends=[abind chk dttr2 tibble]; }; rties = derive2 { name="rties"; version="5.0.0"; sha256="1mxgzrlf41hhawab2664az151fmmhm8ivnnimmzm538yliilc0b7"; depends=[DataCombine DescTools deSolve dplyr ggplot2 gridExtra interactions lattice lme4 MASS mclust nlme nnet plyr zoo]; }; - rtiff = derive2 { name="rtiff"; version="1.4.8"; sha256="1jphdq8j646gymgyz39cvm7byvcyg00z5b8nmndx3nb270dsl1gd"; depends=[pixmap]; }; rtika = derive2 { name="rtika"; version="1.24.1"; sha256="12r9br3pn3llaixa5dn6g5468nsy5adajgdnnvfyhhbkrr0jwpi5"; depends=[curl digest rappdirs sys]; }; rtimicropem = derive2 { name="rtimicropem"; version="1.4.0"; sha256="0z6bnzks8mcb871m3z5b3cd883hj1i17swjgly005hvwbvi9h61f"; depends=[changepoint dplyr fs ggplot2 knitr lazyeval lubridate R6 rbokeh readr stringr tibble tidyr]; }; rtip = derive2 { name="rtip"; version="1.1.1"; sha256="0lfny8nvgnf90xsmgmr32nzjbw8117m4vw7d0bc3xm4pzpnymjdq"; depends=[boot ggplot2 mvtnorm plyr rootSolve]; }; @@ -14273,47 +14833,49 @@ in with self; { rtrends = derive2 { name="rtrends"; version="0.1.0"; sha256="04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1"; depends=[dplyr lubridate tidyr]; }; rtrim = derive2 { name="rtrim"; version="2.1.1"; sha256="1l2ijkm4p3nd7n4q1b4y9pdyafgyf76zizpi7hhzw1rr9zkxhff2"; depends=[]; }; rts = derive2 { name="rts"; version="1.0-49"; sha256="086zlmcjsv7a38k1jfzq2vhlmx7nivhffcz83i57hl6wbkjl7gv2"; depends=[raster RCurl sp xts zoo]; }; + rtsVis = derive2 { name="rtsVis"; version="0.0.2"; sha256="119gjpdjbm4wcb7c10q12s17w3k0andkkbgzx7akbc9dvvz9rg8c"; depends=[assertthat dplyr ggplot2 moveVis pbapply raster RStoolbox sf sp tidyr]; }; rtsdata = derive2 { name="rtsdata"; version="0.1.2"; sha256="0h0zk8vy21xh0n6pcipgml0b0f4pfi94q6hjdqkxd3xsa6a5scra"; depends=[alfred anytime brotli curl data_table mongolite Quandl quantmod xts zoo]; }; rtson = derive2 { name="rtson"; version="1.3"; sha256="1gwvk7nmq9bz90jy1zh7lhr735iw804pmwxykdpaigcsnxk7zx03"; depends=[R6]; }; rtsplot = derive2 { name="rtsplot"; version="0.1.3"; sha256="0va6ir0bmpnw4ibvfh2j4z01flg72dpxn7q10sdsdj304hb0g4in"; depends=[quantmod RColorBrewer xts zoo]; }; rtweet = derive2 { name="rtweet"; version="0.7.0"; sha256="05pbvxm2vmf6935b9s6663k3aifnkr3m52wh2jvnplmrwyrfpn9n"; depends=[httpuv httr jsonlite magrittr progress Rcpp tibble]; }; rtype = derive2 { name="rtype"; version="0.1-1"; sha256="0wjf359w7gb1nrhbxknzg7qdys0hdn6alv07rd9wm6zynnn1vwxy"; depends=[]; }; rtypeform = derive2 { name="rtypeform"; version="2.1.0"; sha256="02qnsw2nd3fnyr0gbmx3690b78k899dxf04g4bqpjlg9y38g1cnr"; depends=[assertthat dplyr glue httr jsonlite lubridate purrr rlang tibble tidyr]; }; - rubias = derive2 { name="rubias"; version="0.3.1"; sha256="1x7h38lsdq03cd72ffawr8mpnf1c1a16sxgmz3c52fn3b9n28jxm"; depends=[dplyr gtools magrittr Rcpp RcppParallel readr rlang stringr tibble tidyr]; }; + rubias = derive2 { name="rubias"; version="0.3.2"; sha256="1dq7bjb3p87gvsg9b2vpd65xp8ihp68dic2w9my687mpc11fxp1v"; depends=[dplyr gtools magrittr Rcpp RcppParallel readr rlang stringr tibble tidyr]; }; rucm = derive2 { name="rucm"; version="0.6"; sha256="1n6axmxss08f2jf5impvyamyhpbha13lvrk7pplxl0mrrrl5g0n8"; depends=[KFAS]; }; rucrdtw = derive2 { name="rucrdtw"; version="0.1.4"; sha256="0865x8i2n63xjbq0pzalm4gd6rpg72yrcsm4rw40a3kzy2svvnlm"; depends=[Rcpp]; }; rugarch = derive2 { name="rugarch"; version="1.4-4"; sha256="06zmii3wncxndd4hhdk7h4d4s2lj5clrrs10zzz4856g9zjzmbq6"; depends=[chron ks nloptr numDeriv Rcpp RcppArmadillo Rsolnp SkewHyperbolic spd xts zoo]; }; ruimtehol = derive2 { name="ruimtehol"; version="0.3"; sha256="1qscaj28xrrqccav0y82mn5nzkc8zfgmx2axg7bxrrhqaibfpy5j"; depends=[BH Rcpp]; }; ruin = derive2 { name="ruin"; version="0.1.1"; sha256="124xs1c2mjfy6z0bp83rwkqw2y73g77xwn3q4yd2xw0v2frnpvpz"; depends=[ggplot2]; }; ruler = derive2 { name="ruler"; version="0.2.4"; sha256="159k7453jb37zgjg9rcgz566mz2827dpfq5gm40r6zgkia4z3apx"; depends=[dplyr keyholder magrittr rlang tibble tidyr]; }; - rules = derive2 { name="rules"; version="0.1.0"; sha256="12xqhay5ghg02yyqz8v6z2284sg9y7jin45v2b5d9s7a81ci2dq9"; depends=[dials dplyr parsnip purrr rlang tibble tidyr]; }; - rumidas = derive2 { name="rumidas"; version="0.1.0"; sha256="0lfc7d3z1ixgagwznq29spkz3xlzd6yq6q79rapcm4qcz3vljr0v"; depends=[highfrequency lubridate maxLik Rdpack roll tseries xts zoo]; }; + rules = derive2 { name="rules"; version="0.1.1"; sha256="1ksbw8v5ij0mya5jq62hyy6ak6x9lx82vq8cmck0hfixapgf8s1x"; depends=[dials dplyr generics parsnip purrr rlang stringr tibble tidyr]; }; + rumidas = derive2 { name="rumidas"; version="0.1.1"; sha256="1hnkjj689kn7sx5gvjrh1x3n5pickb9d0adb5n0grjq4j5ympbns"; depends=[highfrequency lubridate maxLik Rdpack roll tseries xts zoo]; }; runes = derive2 { name="runes"; version="0.1.0"; sha256="1s2vhwya434q70j4aq4qbds8wivscc5cyldr5pch7p41nqj0j7aw"; depends=[]; }; - runjags = derive2 { name="runjags"; version="2.0.4-6"; sha256="0w97s1j5v05fn4nclqwg56hl9vz6vi2l6sp042r6iyh024fsyg22"; depends=[coda lattice]; }; - runner = derive2 { name="runner"; version="0.3.7"; sha256="0480ndavxz9gldyvz8v9mxszfnysxf13vva2fw6qc49ikm88dry6"; depends=[Rcpp]; }; + runexp = derive2 { name="runexp"; version="0.2.1"; sha256="0pcxwz0kpfrcsfalwlcwp81k3dyc9rqm9rba25xkp51bwz5scv64"; depends=[doParallel foreach]; }; + runjags = derive2 { name="runjags"; version="2.2.0-2"; sha256="16h3ym5r2002kjzxa3q4k8yczpmfckdzcaa4wvmikbvgsf1yppz5"; depends=[coda lattice]; }; + runner = derive2 { name="runner"; version="0.4.0"; sha256="0hpg4zimlwdi07wv3sr9gw7dv7djckkzc79b52nsm5zqddrsp50j"; depends=[Rcpp]; }; runonce = derive2 { name="runonce"; version="0.2.2"; sha256="0zfxrz0mxsfwkfs2kzwvhi2s94imsa3pjw86f5syibwr8inwnza0"; depends=[bigassertr urltools]; }; runstats = derive2 { name="runstats"; version="1.1.0"; sha256="0n9348af60j8a2mwgbafabspb4nm45ry92zlzmynja06zyx8lb2d"; depends=[fftwtools]; }; rusda = derive2 { name="rusda"; version="1.0.8"; sha256="0xx72jjf1pyixwpnvvgx5n2vc5gl46bam1caav043iqki68wb338"; depends=[foreach httr plyr RCurl stringr taxize testthat XML]; }; rusk = derive2 { name="rusk"; version="0.1.1"; sha256="0a6vbcnfzlfq9fmibiy0cwcfix65qhxq4f7wc7d53riga82s00lk"; depends=[dplyr ggforce ggplot2 reshape2 shiny tidyr]; }; - rust = derive2 { name="rust"; version="1.3.10"; sha256="044945nyds1wyw1p4hfxdhhaj2yldjplc0zp1phxrq930s2fjhkv"; depends=[Rcpp RcppArmadillo]; }; + rust = derive2 { name="rust"; version="1.3.11"; sha256="10ih36dlk5i8r0i8ld4kh2pm3p1dvdqnw3hqv9njjbbj1zkw5fyy"; depends=[Rcpp RcppArmadillo]; }; ruta = derive2 { name="ruta"; version="1.1.0"; sha256="1qr2ryz55h2j3wlwg0535lhmk2ydm0idfxl07rlfxq1pi32cjms1"; depends=[keras purrr R_utils]; }; rutifier = derive2 { name="rutifier"; version="1.0.4"; sha256="045pr8apd105azs1glpwqrbamglqddxfpml9yrfrlaivz3fjd9l8"; depends=[R_utils]; }; ruv = derive2 { name="ruv"; version="0.9.7.1"; sha256="1n4q9mrp9f644spbns6bbnzmlabrg90hwkdfg3hnm3rxp9b4xid0"; depends=[ggplot2 gridExtra scales]; }; rv = derive2 { name="rv"; version="2.3.4"; sha256="0kn56agxv6p861r247yhwfkp8pj33bghy5444a6f3y22yyzc8ngz"; depends=[]; }; rvHPDT = derive2 { name="rvHPDT"; version="3.0"; sha256="05nrfnyvb8ar7k2bmn227rn20w1yzkp1smwi4sysc00hyjrlyg8s"; depends=[gtools]; }; rvTDT = derive2 { name="rvTDT"; version="1.0"; sha256="09c2fbqnlwkhaxfmgpsdprl0bb447ajk9xl7qdlda201fvxkdc8v"; depends=[CompQuadForm]; }; - rvalues = derive2 { name="rvalues"; version="0.6.3"; sha256="1bsdvwcijb75f27c8padjx8663as667axc4skwa6xgv5y423kbd0"; depends=[]; }; + rvalues = derive2 { name="rvalues"; version="0.7.1"; sha256="0vgizlm5g6mnzvwsprgg0wj0k2y3nc8zn1bqdaw58py92mqpvj1d"; depends=[]; }; rvcheck = derive2 { name="rvcheck"; version="0.1.8"; sha256="0627bc8qmhxmd63yh6f90qni3qw1zwdpxjln2qbychzmzd4am9ac"; depends=[BiocManager rlang]; }; rversions = derive2 { name="rversions"; version="2.0.2"; sha256="0ghpla5r3d6zh5dn6d6ii5p0a952lcdv004m88fk8r9k76vz88rm"; depends=[curl xml2]; }; rvertnet = derive2 { name="rvertnet"; version="0.8.0"; sha256="1j8kgyzcn14yl44lnxc8f83wpmgpdzx5aiw91zjbjkajj6bgzrpn"; depends=[crul dplyr ggplot2 jsonlite maps]; }; - rvest = derive2 { name="rvest"; version="0.3.6"; sha256="1yh2p429a0zr8pqmlw5rzf6m797j20j5w6xwxlqq0wrdbnif6bka"; depends=[httr magrittr selectr xml2]; }; + rvest = derive2 { name="rvest"; version="1.0.0"; sha256="04spcv6nxlmx5bxncq0vybfqrs8jgjamzyrn6wmkdcwii8jvyn53"; depends=[httr lifecycle magrittr rlang selectr tibble xml2]; }; rvg = derive2 { name="rvg"; version="0.2.5"; sha256="1i0alsr9ahl54gwszvaqz5qgiqs85wwzs5d31z97x315sk3n994j"; depends=[gdtools officer Rcpp rlang xml2]; }; - rviewgraph = derive2 { name="rviewgraph"; version="1.3.1"; sha256="1jv6ldvzi1av093nqbdivhm0l0q7j1ipmvi486zcbsnwrcj15m91"; depends=[rJava]; }; - rvinecopulib = derive2 { name="rvinecopulib"; version="0.5.5.1.0"; sha256="1138w1jsqg0q9znzkln3d7iwnzvw3hbgykvw1gavlzxm627hglxv"; depends=[assertthat BH kde1d lattice Rcpp RcppEigen RcppThread wdm]; }; - rvkstat = derive2 { name="rvkstat"; version="2.6.3"; sha256="0vh5gsvfs01f7mw0cl1wap1w1nsgr4fyv9fdays8b8ad3gc17a2r"; depends=[httr jsonlite RCurl tidyr]; }; + rviewgraph = derive2 { name="rviewgraph"; version="1.4.0"; sha256="1430c5nzsrmyq6sxp8qbjw8g462gx4vjp8xx7y5aqbgr47xmhpg3"; depends=[rJava]; }; + rvinecopulib = derive2 { name="rvinecopulib"; version="0.5.5.1.1"; sha256="1l791d2hp7xg7wv0wpm14g2ilmq0ima7p0l6xhw6s5q2wz34lkcm"; depends=[assertthat BH kde1d lattice Rcpp RcppEigen RcppThread wdm]; }; + rvkstat = derive2 { name="rvkstat"; version="3.0.1"; sha256="17qlays4kycsp1cjrk5rpsciw50ll9a91kd3q15b2s39di3l04nf"; depends=[dplyr httr jsonlite lgr stringr tidyr]; }; rvmethod = derive2 { name="rvmethod"; version="0.1.2"; sha256="1g2d5pvz5s1sj2kalxaz7nb8874m4113ly809zbimngi1lhg8zi1"; depends=[assertthat locfit]; }; rwa = derive2 { name="rwa"; version="0.0.3"; sha256="11irb6ayr1a1rbmhc9zqwyb1vjfc0fq7imji0lfa30zplwgf1mqh"; depends=[dplyr ggplot2 magrittr tidyr]; }; - rwalkr = derive2 { name="rwalkr"; version="0.5.3"; sha256="156834rfqmlb3ibwg9ys11276zhhqghazrpnv82pvd83gn48f3vq"; depends=[dplyr hms httr tidyr]; }; + rwalkr = derive2 { name="rwalkr"; version="0.5.5"; sha256="0bpjrk3kcl4g11kyrpbbvi7xhbwlr4x5n5y3330q923m3sgcdg8l"; depends=[dplyr hms httr progress tidyr]; }; rwavelet = derive2 { name="rwavelet"; version="0.4.1"; sha256="092c1h1xyyi2fwg99dgbn1b22cgf8mliizjpc2z7dnravznprr94"; depends=[signal]; }; rwc = derive2 { name="rwc"; version="1.11"; sha256="1qhgkbkp4nz0wq5c4x8232xiszpiyzcdklfgvpnx4cbp3bbfdi4g"; depends=[MASS Matrix mvtnorm raster]; }; rwebstat = derive2 { name="rwebstat"; version="1.1.0"; sha256="106dkhlr33ii17q45c1hrmbslwsj1qlmx325skch2q71mv7ii0lj"; depends=[dplyr getPass htmltools httr jsonlite readr stringr]; }; @@ -14330,11 +14892,10 @@ in with self; { ryandexdirect = derive2 { name="ryandexdirect"; version="3.6.0"; sha256="0f1z8gp1pxfqx694alj435ihzxvd9ban04b1clzipgdq9la1hza8"; depends=[bitops data_table dplyr httr jsonlite magrittr purrr readr stringr tidyr xml2]; }; rym = derive2 { name="rym"; version="1.0.3"; sha256="0sxi9a4rx78kxcfvsmyzr138fhzb19pwvj29ryijlsfl7n2h4h16"; depends=[httr purrr stringr]; }; ryouready = derive2 { name="ryouready"; version="0.4"; sha256="1d9z3paxcrkwsgn5g83x57jwz2iqarks30x0bwg48i5ispw6xbr3"; depends=[car ggplot2 stringr]; }; - rysgran = derive2 { name="rysgran"; version="2.1.0"; sha256="1l2mx297iyipap8cw2wcw5gm7jq4076bf4gvgvij4q35vp62m85z"; depends=[lattice soiltexture]; }; rzentra = derive2 { name="rzentra"; version="0.1.0"; sha256="1knp1616ck64wgf3r80s1nywdnljc1r9fjvgg531j0fxir04aqkl"; depends=[data_table dplyr httr jsonlite lubridate magrittr purrr]; }; - rzmq = derive2 { name="rzmq"; version="0.9.7"; sha256="0iasjaka3gx616l5bxyg2k0fi33hldaplvs0h03j6jpxfmxvcisz"; depends=[]; }; - s2 = derive2 { name="s2"; version="1.0.3"; sha256="0vm2rch4msv6s4lqsclkdyfgnyj936bf9znx74hs3zf9jpp93bfx"; depends=[Rcpp wk]; }; - s20x = derive2 { name="s20x"; version="3.1-29"; sha256="12l0pygl0ca3dbxbsf2zfhhxwcbb5ci070ly3s8fz5hbzri3yyn4"; depends=[]; }; + rzmq = derive2 { name="rzmq"; version="0.9.8"; sha256="0lqwxi9ckydvrmmkwy3mhqd28gyajijznbbb4j23mnmi0aspwnl1"; depends=[]; }; + s2 = derive2 { name="s2"; version="1.0.4"; sha256="0plq5gr9mk7dv6nzddgkgz8wx2iqdxn0dcxgjhzlg99swfx4w9rw"; depends=[Rcpp wk]; }; + s20x = derive2 { name="s20x"; version="3.1-30"; sha256="03j4hkrfxx23f4v3428wrpm5f09a6vcbpb2b12q68qshkqdjrpmg"; depends=[]; }; s2dv = derive2 { name="s2dv"; version="0.1.1"; sha256="18vb90a9kmdk861r3w99gx4ijmpws2f5xbxdbyll5gjj9nr3vx6k"; depends=[abind bigmemory ClimProjDiags GEOmap geomapdata mapproj maps multiApply ncdf4 plyr]; }; s2dverification = derive2 { name="s2dverification"; version="2.9.0"; sha256="0kynj8l39dswm2v6051ikgp0a0pi0c3gsdmhrxwjrxrpbgm7hrhn"; depends=[abind bigmemory GEOmap geomapdata mapproj maps NbClust ncdf4 plyr SpecsVerification]; }; s2net = derive2 { name="s2net"; version="1.0.1"; sha256="1f6lc8azx8lax7jc5ggzirwnp5d9ka2plimfkg70vx783xf56zaw"; depends=[MASS Rcpp RcppArmadillo]; }; @@ -14352,7 +14913,7 @@ in with self; { saasCNV = derive2 { name="saasCNV"; version="0.3.4"; sha256="12h5vrl55sb4wmx0hzib5iax8p0q2qzk19h15r0asfkh9l7qz94l"; depends=[DNAcopy RANN]; }; sabarsi = derive2 { name="sabarsi"; version="0.1.0"; sha256="14c94zby3jjm6jr28nrg3qp6r6iw68wsb5l5bpd6jjz9pkljrk9i"; depends=[]; }; sabre = derive2 { name="sabre"; version="0.3.2"; sha256="14rvc8in8lfs9vg96jkqm3xg7bszwss5zd78vngp36x4yay007b6"; depends=[dplyr entropy raster rlang sf tibble tidyr]; }; - sac = derive2 { name="sac"; version="1.0.1"; sha256="1rl5ayhg5y84fw9w3zf43dijjlw9x0g0w2z4haw5xmxfni72ms8w"; depends=[]; }; + sac = derive2 { name="sac"; version="1.0.2"; sha256="1yg133zm0db2lv0m62ij7c27bs4k3kbjic15dwrak534lk885sj2"; depends=[]; }; saccades = derive2 { name="saccades"; version="0.1-1"; sha256="138a6g3hjmcyvflpxx1lhgxnb8svrynplrjnvzij7c4bzkp8zip6"; depends=[zoom]; }; sad = derive2 { name="sad"; version="0.1.3"; sha256="0wr4xdx68hrxaw5izy36gm10smk6s1gzrzwayhfp4lhvkn75qsww"; depends=[dualtrees emdist]; }; sadists = derive2 { name="sadists"; version="0.2.4"; sha256="00iqgwqfia4mybg4v66kb368gydr103zmr8ka9y4j8rmwkg5j9kq"; depends=[hypergeo orthopolynom PDQutils]; }; @@ -14362,32 +14923,34 @@ in with self; { saeRobust = derive2 { name="saeRobust"; version="0.2.0"; sha256="1bdfrsm59xwkga0kxl3r5n83mhhkyzj7gplrgx26gyflashyd1zc"; depends=[aoos assertthat ggplot2 magrittr MASS Matrix memoise modules pbapply Rcpp RcppArmadillo spdep]; }; saeSim = derive2 { name="saeSim"; version="0.10.0"; sha256="0nh8x2v0g8i0rjq4s5q0ayhyxhl5p0126plmd4vnnhaifm6pn0q3"; depends=[dplyr functional ggplot2 MASS parallelMap spdep]; }; saeeb = derive2 { name="saeeb"; version="0.1.0"; sha256="04vjxmnqcgqcamgjd9qq1dbx0msm40mnn94jjy9pzvsj2gsbws39"; depends=[COUNT MASS]; }; - saemix = derive2 { name="saemix"; version="2.3"; sha256="08n1syv8wkf1nqz8i1n3ippyp63g56xf8xqgczxm630r6802yqab"; depends=[]; }; + saemix = derive2 { name="saemix"; version="2.4"; sha256="0w79n28xvkf2iw0vm9bw5dhxlp54bzm1lwl7q2hw356c2gmbpwjh"; depends=[]; }; saery = derive2 { name="saery"; version="1.0"; sha256="09x1v627llqbpiwkh1wr0z7gsndfdrjzag2hprhq1adbzh05k47z"; depends=[]; }; safeBinaryRegression = derive2 { name="safeBinaryRegression"; version="0.1-3"; sha256="1g68r6pp5l41rbgyfqgcha1gpsisnl0ybdmdqr4ylr43f61dpgvd"; depends=[lpSolveAPI]; }; safedata = derive2 { name="safedata"; version="1.0.9"; sha256="0xcpgh4898rqdnnxx21vyxc8aqlwg26aywr591sllasrv1jzsmrc"; depends=[chron curl igraph jsonlite readxl sf]; }; + safejoin = derive2 { name="safejoin"; version="0.1.0"; sha256="0qvra505g7cay3nhq6yqrddb7sw3kx50y8jhgvxi47rxdc3alzba"; depends=[dplyr glue]; }; safer = derive2 { name="safer"; version="0.2.1"; sha256="1lmhaj9y0hi4ybxfkllxl99vsagcg73sy4kkcmlvn3bs69jky1r9"; depends=[assertthat base64enc sodium]; }; + safetyData = derive2 { name="safetyData"; version="1.0.0"; sha256="1spa1wh1z8cqsz8vrkj3abny0xs3qp8d80dla8d031d70hvfkdjc"; depends=[]; }; safetyGraphics = derive2 { name="safetyGraphics"; version="1.1.0"; sha256="1s8xwx014nihn13v6rpwy11sb3yzfyj3alb88y47wp1kh39d7f0q"; depends=[dplyr DT haven htmlwidgets jsonlite magrittr purrr rlang rmarkdown shiny shinybusy shinyjs shinyWidgets stringr tibble tidyr]; }; sail = derive2 { name="sail"; version="0.1.0"; sha256="1wrh2dam5lblascqd8gl76jks72ys1amz84c6p08y8ykdmn2saq1"; depends=[gglasso glmnet]; }; salem = derive2 { name="salem"; version="0.2.0"; sha256="1pk27d57bmds0jvnvwai2scjy798lb7w6lb84yxl4ccgyn1ldh45"; depends=[]; }; salesforcer = derive2 { name="salesforcer"; version="0.2.2"; sha256="12s2knfyq4h33n7mfs1xjbvs1fh52dyw19y759z7l2bvmv27b71h"; depends=[base64enc curl data_table dplyr httr jsonlite lifecycle lubridate mime purrr readr rlang rlist tibble vctrs XML xml2 zip]; }; - salso = derive2 { name="salso"; version="0.2.5"; sha256="0dc5bn78028yvfzffnfdl1m6jsb5ccc400ih5pwg5ikajf7mfs8v"; depends=[]; }; + salso = derive2 { name="salso"; version="0.2.20"; sha256="0vppjvmmafaadmcyykj8w2v1ay8fk3307lqpmg8z246w6hx94x96"; depends=[cargo]; }; salty = derive2 { name="salty"; version="0.1.0"; sha256="1dxq62yrkv416fy09l03slc7ci6mnwiyvjlsxhbqnj8yjy3kbhr6"; depends=[assertthat purrr stringr]; }; sambia = derive2 { name="sambia"; version="0.1.0"; sha256="15yz5lrjav5bs8m52crg3l43xmi4gf7wydji76p181ssyg43z2ln"; depends=[dplyr e1071 FNN mvtnorm pROC ranger smotefamily]; }; - samc = derive2 { name="samc"; version="1.2.1"; sha256="143dfslm4yrqrad8ddjq2fmv56zp11v2kjr5x01gnw6aic0c6ash"; depends=[gdistance Matrix raster Rcpp RcppEigen]; }; + samc = derive2 { name="samc"; version="1.3.0"; sha256="0sa63064v78d3gdcqivhy19bnrlvhihrs409b9rklrvh5wn3p039"; depends=[gdistance Matrix raster Rcpp RcppEigen]; }; samon = derive2 { name="samon"; version="4.0.1"; sha256="1zhnv7kdpd2zhp6il5x56v4yh5703n1nsnkrysygns4i7xhvcf6z"; depends=[]; }; - sampSurf = derive2 { name="sampSurf"; version="0.7-5"; sha256="0ks95d1w5dvxz4vb850hb5v0w8xg6sil0gvddmd1mrrjkjqkk96f"; depends=[boot lattice latticeExtra raster rasterVis sp]; }; + sampSurf = derive2 { name="sampSurf"; version="0.7-6"; sha256="1f2ndfrxz0v0di9sb17rxs3iik2qw2nj1dn7apl55b2d07nsmpk3"; depends=[boot lattice latticeExtra raster rasterVis sp]; }; sampleSelection = derive2 { name="sampleSelection"; version="1.2-12"; sha256="1am1w8c24f27gcdmrk3b4wp9j5awghnw9s9lphnkm10pl31881dy"; depends=[Formula maxLik miscTools mvtnorm systemfit VGAM]; }; sampler = derive2 { name="sampler"; version="0.2.4"; sha256="12jjx3ci1yss8dj64bjdmz73cyjfkwb7b9zk4zm48lqv78k6wlv7"; depends=[dplyr purrr reshape tidyr]; }; samplesize = derive2 { name="samplesize"; version="0.2-4"; sha256="0n6z7jmf665lbj3g1mjy87a9fh53z85546bhrkmkgsysb0r9q6iq"; depends=[]; }; samplesize4surveys = derive2 { name="samplesize4surveys"; version="4.1.1"; sha256="0v332xb4vkkjr3nwf3231aqgzsj7mqld9ffkla1nj52lxay2ji75"; depends=[dplyr magrittr TeachingSampling timeDate]; }; samplesizeCMH = derive2 { name="samplesizeCMH"; version="0.0.0"; sha256="0gdywqmylid4fkz5syzf1wgcan71whhm9gjylmsg4p05hlwvpv1d"; depends=[]; }; samplesizelogisticcasecontrol = derive2 { name="samplesizelogisticcasecontrol"; version="0.0.6"; sha256="1xznql86r6snkkmk9g05jhdam06pr0qmg40mdzasl291nc50v5aa"; depends=[mvtnorm]; }; - sampling = derive2 { name="sampling"; version="2.8"; sha256="06pj7dan0mknpsblmlnk7am78qrnwgnql5vvx7vmbfvib7rj6s9m"; depends=[lpSolve MASS]; }; + sampling = derive2 { name="sampling"; version="2.9"; sha256="11xis4vzn2ga8ml9xrgfgqzccvwbnabq35aidzdvpnvciybsanvz"; depends=[lpSolve MASS]; }; samplingDataCRT = derive2 { name="samplingDataCRT"; version="1.0"; sha256="0ah3fi2sn642c8nicikhjhl1hdsjzshrf1j02swq0jaqggcqjdvk"; depends=[mvtnorm]; }; samplingEstimates = derive2 { name="samplingEstimates"; version="0.1-3"; sha256="1srdchlpxksfdqhf5qdvl7nz0qsxkxww7hzqj0q71asbzlq3am3p"; depends=[samplingVarEst]; }; samplingVarEst = derive2 { name="samplingVarEst"; version="1.4"; sha256="0gzz0qz67h3vpdsi5g1w7fkyacj8789qxmj353q7pd0jm20q60l1"; depends=[]; }; - samplingbook = derive2 { name="samplingbook"; version="1.2.2"; sha256="1szx9bdlxxn2yhy9i362fcscn5cydvrkw9kggr7yqb715k5n1j6n"; depends=[pps sampling survey]; }; + samplingbook = derive2 { name="samplingbook"; version="1.2.4"; sha256="08fhzanzb725hlagm0225121gdgipkbfkixizwykggaimkz5j1ad"; depends=[pps sampling survey]; }; samr = derive2 { name="samr"; version="3.0"; sha256="01km0f7qgm73x19vbvsxl083hs1dq4dj8qm5h64cxbf20b08my15"; depends=[GSA impute matrixStats openxlsx shiny shinyFiles]; }; sams = derive2 { name="sams"; version="0.4.0"; sha256="1h0sg2q8yklffllwddlnx4d18lkc8lab5zc3pkh6xiwr9xg1fqas"; depends=[]; }; samurais = derive2 { name="samurais"; version="0.1.0"; sha256="0s00hd3ax4r662n8iqmd9i56sgyjxbgc59la7qvh3jwcnzcvmgz9"; depends=[MASS Rcpp RcppArmadillo]; }; @@ -14402,26 +14965,29 @@ in with self; { santaR = derive2 { name="santaR"; version="1.0"; sha256="10g4z951mpxw9d21s5f6zwfch5xs9vx812fb0wyrbw9s8drmlbkh"; depends=[doParallel foreach ggplot2 gridExtra iterators pcaMethods plyr reshape2 shiny shinythemes]; }; santoku = derive2 { name="santoku"; version="0.5.0"; sha256="1l69jnlzcjkwr8wqmgf40nkf48a58m50c6cwn8sh0vd71bmi75qm"; depends=[assertthat lifecycle Rcpp vctrs]; }; sanzo = derive2 { name="sanzo"; version="0.1.0"; sha256="1fqsx2mgjsy6vjvsp2avi2i5cw7cjs2p53l1z6hb3bzid3067s87"; depends=[]; }; - sapevom = derive2 { name="sapevom"; version="0.1.0"; sha256="0xlx14wrv28nc8ggh6dr486slnbx10irwb2yrgnxg5viw4pswwys"; depends=[]; }; + sapa = derive2 { name="sapa"; version="2.0-3"; sha256="0kj681rd4c2lvqr926lb6f4qwp281x5274dg6vbk8pf5y7s0qlpc"; depends=[ifultools splus2R]; }; + sapevom = derive2 { name="sapevom"; version="0.2.0"; sha256="0vq4rx85pdjc0wjxjf7wj8j5qs3cb20hwhlc2ypbgrlw7zkcp1z4"; depends=[]; }; sapfluxnetr = derive2 { name="sapfluxnetr"; version="0.1.1"; sha256="00dywrfi6321v5xac7wll5yfwr7ffqhbscgv4akaijpqf44b5m2m"; depends=[assertthat dplyr furrr ggplot2 glue lubridate magrittr purrr rlang stringr tibble tidyr]; }; - saqgetr = derive2 { name="saqgetr"; version="0.2.1"; sha256="014i3grbbvyndndm5qxqydkzfc2h2shzrvls1f4fm8l5vnx7yjc6"; depends=[curl dplyr fs lubridate magrittr purrr readr stringr tidyr]; }; - sara4r = derive2 { name="sara4r"; version="0.0.7"; sha256="1la02rq16c3hvfg4dygz6himvs88nmry8616fzgnsbxzpddl5aw3"; depends=[raster rgdal RGtk2 sp]; }; + saqgetr = derive2 { name="saqgetr"; version="0.2.21"; sha256="0s7mmc8gqx89697wkv369x6sp3d1wha4q2zkkwikh835i3alx4zd"; depends=[dplyr httr lubridate magrittr purrr readr stringr tidyr]; }; + sara4r = derive2 { name="sara4r"; version="0.0.8"; sha256="0b8ir25f0348pd2ckwzv1pyz3iz98zy09baih3rkgxxn8hjdnxj7"; depends=[raster rgdal RGtk2 sp]; }; sarima = derive2 { name="sarima"; version="0.8.4"; sha256="0aysxgp34xn0gz9jxb2garprfzx61xmqnxlz2c2ay22llkc806dn"; depends=[dplyr FitAR FitARMA FKF Formula KFAS lagged ltsa numDeriv PolynomF Rcpp RcppArmadillo Rdpack]; }; sarp_snowprofile = derive2 { name="sarp.snowprofile"; version="1.0.0"; sha256="02g7d5kilfkhqxm02jkhkraqbamxaj1qzzi150k6m55d5bfy4wih"; depends=[data_table xml2]; }; sarp_snowprofile_alignment = derive2 { name="sarp.snowprofile.alignment"; version="1.0.2"; sha256="1yh4ybnscjzps28ncqd46xzv88fjcn4bhcx6rwz8kl1m253c4wpl"; depends=[dtw sarp_snowprofile shiny]; }; - sars = derive2 { name="sars"; version="1.3.0"; sha256="0zpwmyqjaxnx13n3vz10szl7iyvk40fpm8x2d6irmhbgfzhc2qvx"; depends=[cli crayon doParallel dplyr foreach nortest numDeriv]; }; - sarsop = derive2 { name="sarsop"; version="0.6.6"; sha256="01rlhjfry8yj42mavvdl7maggz6z4sv8zlz51mxcrsqhndm1ijvc"; depends=[BH digest Matrix processx xml2]; }; + sars = derive2 { name="sars"; version="1.3.3"; sha256="112y6zj6ccn3gyl38zllkw4bmj7g7j18dipl79lvq7yjq5gxj17q"; depends=[AICcmodavg cli crayon doParallel foreach nortest numDeriv]; }; + sarsop = derive2 { name="sarsop"; version="0.6.8"; sha256="0bzi588qh18n48zxfg7v0kl9fwvl9iq70pn580vfg0ngz0gbgk3x"; depends=[BH digest Matrix processx xml2]; }; sas7bdat = derive2 { name="sas7bdat"; version="0.5"; sha256="0qxlapb6wdhzpwlmzlhscy3av7va3h6gkzsppn4sx5q960310an3"; depends=[]; }; - sasLM = derive2 { name="sasLM"; version="0.2.1"; sha256="19z842ayd6p5v2hpihmn1dhinyc14sh87ag5hiy56igi4rbb4iv5"; depends=[]; }; + sasLM = derive2 { name="sasLM"; version="0.5.2"; sha256="15q5crglpj56vjl448bvjyy9k2w6qwymk5xg3wfp7ijczr2wqghq"; depends=[]; }; sasMap = derive2 { name="sasMap"; version="1.0.0"; sha256="11vhhxhakqm1gsb3p4s4966sapmrqfyw79zfppbx5lnqi3xr0ngn"; depends=[readr stringi stringr]; }; - sass = derive2 { name="sass"; version="0.2.0"; sha256="0qzrncsnp0zd8jyp4whss92m7llqsfccmp9p9r3gdc7hlq1amp3z"; depends=[digest fs htmltools rlang]; }; + sasfunclust = derive2 { name="sasfunclust"; version="1.0.0"; sha256="1ba7g3rxyq5h806na6bsdvh6mw6hydgcf3740qkfd4d5fx7m0mq4"; depends=[fda MASS Matrix matrixcalc mclust Rcpp RcppArmadillo]; }; + sass = derive2 { name="sass"; version="0.3.1"; sha256="1cxqwsdyz71mgflqqa65mfr161jlv8q9mshs1y19pxp6pz5wnv0s"; depends=[digest fs htmltools R6 rappdirs rlang]; }; + sassy = derive2 { name="sassy"; version="1.0.4"; sha256="18jfhi6v1haalaizlp4w178wm1gjxyj9nqy5wcblakr15rl54xda"; depends=[fmtr libr logr reporter]; }; sate = derive2 { name="sate"; version="1.1.0"; sha256="0d1b0gp5abh5g7a25ff40xdnncrl2afjnlcc56dbhqkk43gjah17"; depends=[MASS]; }; satellite = derive2 { name="satellite"; version="1.0.2"; sha256="1ib9g4cplksf9ymp8hcv843lv5bpar31w8h4wnmya5hjsdmlfiv4"; depends=[plyr raster Rcpp]; }; satin = derive2 { name="satin"; version="1.0"; sha256="0ing5vhw8akrpy703fcwn5p0gadfabqb3abc9ircpgb6y2k5axzk"; depends=[geosphere lubridate maps maptools ncdf4 PBSmapping sp splancs]; }; satscanMapper = derive2 { name="satscanMapper"; version="1.0.1"; sha256="1qr7xz7qp39nylkrx3smzga7rvi2z9yws8kbpmfk13avixr4asvy"; depends=[foreign RColorBrewer SeerMapper sp stringr]; }; saturnin = derive2 { name="saturnin"; version="1.1.1"; sha256="0cjp4h1s9ivn17v8ar48mxflaj9vgv92c8p9l2k5bc9yqx9mcs36"; depends=[Rcpp RcppEigen]; }; saves = derive2 { name="saves"; version="0.5"; sha256="1b4mfi2851bwcp0frx079h5yl6y1bhc2s8ziigmr8kwy1y1cxw10"; depends=[]; }; - savonliquide = derive2 { name="savonliquide"; version="0.1.0"; sha256="0jrgd8yfvq73ackq3i6hb4dx78wbvs93q1psdkk7g884wigb4gn7"; depends=[crayon glue httr]; }; + savonliquide = derive2 { name="savonliquide"; version="0.2.0"; sha256="1f1s2pzvpqrcb68fqk4ivpimwsphnjjx3b42jivw63y7q7ak4azh"; depends=[crayon glue htmltools httr]; }; saws = derive2 { name="saws"; version="0.9-6.2"; sha256="1ikvky45inz65djv1c9v749a5lq4m0xlzhm4p12am25qyv08hgjz"; depends=[gee]; }; sazedR = derive2 { name="sazedR"; version="2.0.2"; sha256="0v8ap9ivwj5h4w2iwhww16v1jm6jpkkphvkh5vq06mv1a72p0inz"; depends=[bspec dplyr fftwtools pracma zoo]; }; sbfc = derive2 { name="sbfc"; version="1.0.2"; sha256="1bwwy4yw8wfvmisiqwswd78dy4bjgmhcv0aki1x2sslzazmdy23y"; depends=[DiagrammeR discretization Matrix Rcpp RcppArmadillo]; }; @@ -14432,17 +14998,16 @@ in with self; { sbmSDP = derive2 { name="sbmSDP"; version="0.2"; sha256="1sl46lqi6w0s7ghv4bywhic56cm2vib3kawprga760m6igargx4y"; depends=[Rcpp RcppArmadillo]; }; sbo = derive2 { name="sbo"; version="0.5.0"; sha256="00pnvpcl6441gf8npf6b6cvzxh0kq4qbfxggjiqdny6lq2nl0d47"; depends=[dplyr Rcpp rlang testthat tidyr]; }; sboost = derive2 { name="sboost"; version="0.1.1"; sha256="126rqvpqwvwjxvsg1v04nkmd6af55j7sgx43jg2vnggyrlli9j9q"; depends=[dplyr Rcpp rlang]; }; - sbtools = derive2 { name="sbtools"; version="1.1.12"; sha256="140xfs39s3x1zrwqpsh4fqswjpli6l1wz2v989vm9z6w4785hdq6"; depends=[curl httr jsonlite stringr]; }; - sbw = derive2 { name="sbw"; version="1.1.1"; sha256="1wlyhqwb07bb3g2ar16wk1wv541m7v4hfyncxgqd0fxsnb955pi8"; depends=[MASS Matrix quadprog slam spatstat]; }; + sbtools = derive2 { name="sbtools"; version="1.1.14"; sha256="0kz220phkqhbc0wfd73pj5g0cd2lzgy0xwyr56mzy03sc0plzvnk"; depends=[curl httr jsonlite stringr]; }; scBio = derive2 { name="scBio"; version="0.1.6"; sha256="1bpizxm9fbxd4sfapi1ayfg5csacb4dvqbvappd79jkq4mrsk12q"; depends=[doSNOW fields foreach LiblineaR limma raster sp]; }; scDIFtest = derive2 { name="scDIFtest"; version="0.1.1"; sha256="1hq68g7zf7372cach2qfc7l1l8gh5aqkp66k0cxjnrhmvvb1qcax"; depends=[mirt sandwich strucchange zoo]; }; + scINSIGHT = derive2 { name="scINSIGHT"; version="0.1.0"; sha256="1y5ana6s4n2giwgjgfd781sxn7g009mi1cwbya53zsf2hb1bb2wz"; depends=[igraph RANN Rcpp RcppArmadillo stringr]; }; scLink = derive2 { name="scLink"; version="1.0.1"; sha256="0gcwx8kfik1lv949r9d9rqqnvrfkr4bj5cj2i9h1r7l1b76kna74"; depends=[glasso]; }; - scMappR = derive2 { name="scMappR"; version="0.1.5"; sha256="0l429nzwflaa50jlpr8rd7av2gnr8fhg59pbrbvziczf6r1jb5z8"; depends=[ADAPTS downloader ggplot2 gProfileR gprofiler2 GSVA limSolve pbapply pcaMethods pheatmap reshape Seurat]; }; - scModels = derive2 { name="scModels"; version="1.0.1"; sha256="0n2sc2l3wy08i0xq7jwigkr42wz9gyhlirmjmma9plnmkbrx0rp4"; depends=[Rcpp]; }; - scPDSI = derive2 { name="scPDSI"; version="0.1.3"; sha256="00z5qk14c1ndrd63rhvknkp3dn3ad8z8mf00p9sb8wbsi908md44"; depends=[Rcpp]; }; + scMappR = derive2 { name="scMappR"; version="1.0.1"; sha256="1kb03k84x0sz969f9fd1xpgizri4saj0yrhc99qf4adz9ynn7zfz"; depends=[ADAPTS downloader ggplot2 gProfileR gprofiler2 GSVA limSolve pbapply pcaMethods pheatmap reshape Seurat]; }; + scModels = derive2 { name="scModels"; version="1.0.2"; sha256="02nn8nv77fgmskx5zsa34ij9lzq9jiv8w2vmw5863v55khzvfs53"; depends=[gamlss_dist Rcpp]; }; scRNAtools = derive2 { name="scRNAtools"; version="1.0"; sha256="0x0lniqhq6q87y08kkkyvmk1g5b8i73hm3h86ba8rcv0v0n7ap9a"; depends=[ALL ConsensusClusterPlus corrplot edgeR foreach ggplot2 ggthemes Hmisc igraph lattice limma PerformanceAnalytics plyr reshape2 Rmisc Rtsne scatterplot3d survival TPEA]; }; - scSorter = derive2 { name="scSorter"; version="0.0.1"; sha256="02zkq37zmi0rsr7m50xqpys56snazhzbp77hwld9jrav6jix4jjm"; depends=[]; }; - scTenifoldKnk = derive2 { name="scTenifoldKnk"; version="1.0.0"; sha256="1p166fmpymyb2669n6npriz6kpsf66q398rjqdcr8zq4bvf4qswj"; depends=[MASS Matrix pbapply RSpectra scTenifoldNet]; }; + scSorter = derive2 { name="scSorter"; version="0.0.2"; sha256="04gnw9i4j8sk3fjh74idk0d6wflw17z1c3afz6wir5pc4y3lzn2j"; depends=[]; }; + scTenifoldKnk = derive2 { name="scTenifoldKnk"; version="1.0.1"; sha256="0d6gcr0qrm7mc36n2lihl7bq9vj40dblqswznbwvxichv8kc5svz"; depends=[MASS Matrix pbapply RSpectra scTenifoldNet]; }; scTenifoldNet = derive2 { name="scTenifoldNet"; version="1.2.4"; sha256="1gnikgfaf74d4sjdjjl34lwy9lcws4haff6x59x8bnjj7k7q219q"; depends=[MASS Matrix pbapply RSpectra]; }; scUtils = derive2 { name="scUtils"; version="0.1.0"; sha256="09c4vwrjj4r0nfcwb8q0a243m0v5wa3qisdlcy7ik58gyxp02zv8"; depends=[assertthat dplyr ggplot2 Matrix scales viridis viridisLite]; }; scaRabee = derive2 { name="scaRabee"; version="1.1-3"; sha256="1yap3hi36f8hk93jn59nxrbgq8iw0xwkkm3pc2gb50cpcpaq41pd"; depends=[deSolve lattice neldermead]; }; @@ -14451,28 +15016,29 @@ in with self; { scaleAlign = derive2 { name="scaleAlign"; version="1.0.0.0"; sha256="0340biwz0md6sxq5iq5wiz6q8kcrll80429f1ab9zz88k3fya2s6"; depends=[]; }; scaleboot = derive2 { name="scaleboot"; version="1.0-1"; sha256="1q0bs5f1vgja5gj3id1ny6raja8ljgd8dk50fs1wn90f6080afy7"; depends=[mvtnorm pvclust]; }; scales = derive2 { name="scales"; version="1.1.1"; sha256="019ps0njjc0rzrjygqiyn8b9vp0c3c0jd56h1yi19wzi49jvdcj0"; depends=[farver labeling lifecycle munsell R6 RColorBrewer viridisLite]; }; - scalpel = derive2 { name="scalpel"; version="1.0.2"; sha256="1rwa1h24b0bzsiasjgj84rd5k5wpw6pnp463qaj624sra9wp9pw9"; depends=[gam igraph Matrix protoclust R_matlab]; }; + scalpel = derive2 { name="scalpel"; version="1.0.3"; sha256="0c8k99i5v2ki2bmcjjr6rfk7y1ds7jlykdwgn5x2zvzpdw7p4vlw"; depends=[gam igraph Matrix protoclust R_matlab]; }; scalreg = derive2 { name="scalreg"; version="1.0.1"; sha256="0kfcgl9cpp6g1qx23s1yrjzn0hi74vmrw567vy9wpsmhk04a5bkx"; depends=[lars]; }; - scam = derive2 { name="scam"; version="1.2-9"; sha256="0y60qvm82x2gwxpqx1r976dxxdipzh4zcvjk4sj8kjv2i5q95z5c"; depends=[Matrix mgcv]; }; - scan = derive2 { name="scan"; version="0.40"; sha256="1khmg05dzs1va66bm26wxx440nlkl0r70wbh814fdlmij3py7m54"; depends=[car kableExtra knitr MASS mblm nlme readxl]; }; + scam = derive2 { name="scam"; version="1.2-11"; sha256="1h8s9azbxw601iqw8pgq2wqil9s6jmmmazs36lwkv2i7k1zldbdm"; depends=[Matrix mgcv]; }; + scan = derive2 { name="scan"; version="0.51"; sha256="16s9b1djww1fiik9ycwp8nr4jalv35pzxmyvvgsckzl0wk53dqmn"; depends=[car kableExtra knitr MASS mblm nlme readxl]; }; scape = derive2 { name="scape"; version="2.3.3"; sha256="1jb5c335qsbrpsgngs8c1qlibyb7zvvx6mwydfhm1plx4pkcq0n1"; depends=[coda Hmisc lattice]; }; scar = derive2 { name="scar"; version="0.2-1"; sha256="04x42414qxrz8c7xrnmpr00r46png2jy5giwicdx6gx8jwrkzhzs"; depends=[]; }; scatr = derive2 { name="scatr"; version="1.0.1"; sha256="1c2z722i7d7qflh4mzb8kkix5i22wph98kwz2p98x2mhaml8802d"; depends=[cowplot ggplot2 ggridges ggstance jmvcore R6]; }; scatterD3 = derive2 { name="scatterD3"; version="0.9.2"; sha256="1w4rr1v6capg4jkb1fj3ijvk6aj8nbw79kg731bcff1vjp8n04hy"; depends=[digest ellipse htmlwidgets]; }; scattermore = derive2 { name="scattermore"; version="0.7"; sha256="18nzlprmphkvjg946h10h2qq0wbkmv2526p8di6k2xl4gccq0qpk"; depends=[ggplot2 scales]; }; - scatterpie = derive2 { name="scatterpie"; version="0.1.5"; sha256="0h48l0699lpfagv09f53yismir84945m56qwzk52lc7wxyvkfcp1"; depends=[ggforce ggplot2 rlang rvcheck tidyr]; }; + scatterpie = derive2 { name="scatterpie"; version="0.1.6"; sha256="1lilzybbxqhrjpwwf9050wf5f896pn5d93llp5da7ssrcn5bm9i8"; depends=[ggforce ggplot2 rlang rvcheck tidyr]; }; scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-41"; sha256="152xqz9c70qab86mpgng049gxsg5f4fpf1m8dh93fb9v1avjd0sc"; depends=[]; }; scbursts = derive2 { name="scbursts"; version="1.6"; sha256="09yxnq6m35xmp0priavjnh0bdcwkr5hhy7j33cz13xwkrd1cgw5j"; depends=[readxl tibble]; }; scclust = derive2 { name="scclust"; version="0.2.2"; sha256="0w0qwz8wfdprs2bgv1cjvd2yb6g12jylad21a9rr3w5bkgxprcrp"; depends=[distances]; }; - sccore = derive2 { name="sccore"; version="0.1.1"; sha256="0jc0cmz3vwbam2mxhj4768982g2bxnimx5j2kk27q8c75yl9pcyn"; depends=[dplyr ggplot2 ggrepel igraph magrittr Matrix pROC Rcpp RcppArmadillo RcppEigen RcppProgress rlang scales tibble uwot withr]; }; + sccore = derive2 { name="sccore"; version="0.1.2"; sha256="01rswkzl836vhad4gaizxp6cbi0qywqdmdcjlbinbbpgrd598v0m"; depends=[dplyr ggplot2 ggrepel igraph irlba magrittr Matrix pbmcapply pROC Rcpp RcppArmadillo RcppEigen RcppProgress rlang scales tibble uwot withr]; }; sccr = derive2 { name="sccr"; version="2.1"; sha256="0cjlzv92b5qrs43d3ry33zcggiqvsqaf8wq4k19ws9lvgh59b62v"; depends=[dplyr]; }; scdensity = derive2 { name="scdensity"; version="1.0.2"; sha256="173xm3bf8vxl30zk4n451al7m003byg9q4d1l1pfyfa4xnv8qdg9"; depends=[lpSolve quadprog]; }; - scdhlm = derive2 { name="scdhlm"; version="0.5.1"; sha256="134qwjikh58arw34298w9vd30i5madyqiqh8hs19jsv3h79g2f80"; depends=[lmeInfo nlme readxl]; }; + scdhlm = derive2 { name="scdhlm"; version="0.5.2"; sha256="147kqr65gxy44nj9rj4jbw590pbqspli4dpkgdq4hj9x1daww2ql"; depends=[lmeInfo nlme readxl]; }; scenario = derive2 { name="scenario"; version="1.0"; sha256="0v1b00kiny21yx4qkk2x51cy1zqibdnd68z76qia7h5py28yhxsi"; depends=[]; }; scgwr = derive2 { name="scgwr"; version="0.1.2-1"; sha256="1dv6lsdpv6gdgjkww3ljqqkwdy9ir82dzwiqrclbfp9vlzay4ybf"; depends=[dplyr FNN optimParallel spData]; }; + schemr = derive2 { name="schemr"; version="0.1.0"; sha256="0w29la0mh5bvij52r8jgfl47cgm0xc53702ms5r4jv0pdd49qlg8"; depends=[apcluster dplyr ggplot2 magrittr OpenImageR purrr stringr]; }; schoRsch = derive2 { name="schoRsch"; version="1.9.1"; sha256="0f823z48s50jhcphqqivchrmkiwqg25nc01c17kjpzzryd2fi5zs"; depends=[]; }; schoenberg = derive2 { name="schoenberg"; version="2.0.2"; sha256="17pbw9266r9lv9blygmvq9285kcrcy07jaqrj3zfa2pg0zyvhjvm"; depends=[crayon]; }; - scholar = derive2 { name="scholar"; version="0.1.7"; sha256="142iwrips1589fa0g1178a6s1cz4dfcv9b0qs570q6b6ccfjxi6r"; depends=[dplyr ggplot2 ggraph httr R_cache rvest stringr tidygraph xml2]; }; + scholar = derive2 { name="scholar"; version="0.2.1"; sha256="1cv1n6mzijqf202krf37ml2l51zpnp69qz0aki1dvkjj3g79zfr9"; depends=[dplyr ggplot2 ggraph httr R_cache rvest stringr tidygraph xml2]; }; schoolmath = derive2 { name="schoolmath"; version="0.4"; sha256="06gcmm294d0bs5whvknrq48sk7li961lzy4bcncjg052zbbpn67x"; depends=[]; }; schrute = derive2 { name="schrute"; version="0.2.2"; sha256="1j1bb7inhxq355kvqmp45zgxz41d3rpbh2rxk9wkahsbiy0cdybn"; depends=[dplyr ggplot2 magrittr stringi stringr tibble tidyr tidytext]; }; schumaker = derive2 { name="schumaker"; version="1.2"; sha256="1whfmnjmib7lh72src7cnbw3mswzaxq8vd50x5x9cv0031n0y6l7"; depends=[]; }; @@ -14480,31 +15046,30 @@ in with self; { scientoText = derive2 { name="scientoText"; version="0.1"; sha256="0f18hg9s50lbbgl0fqjv45yhynpnsxj8wwm07g126snzr68gbd21"; depends=[stringr tm]; }; scifigure = derive2 { name="scifigure"; version="0.2"; sha256="1zc88r1lnb0cws130hq4rjc34rrp6zkmi8yhkwsm3vkznbhi4iba"; depends=[]; }; sciplot = derive2 { name="sciplot"; version="1.2-0"; sha256="097zcgjsv54f6wd8fjwh2xb406j6yrw94v9pcxa0zln1q7fs93vk"; depends=[]; }; - scipub = derive2 { name="scipub"; version="1.2.1"; sha256="1hb4wwpyyx9np75q2d1vg86c0c29h8pyx2s3ffipkdgjaf9b6mjv"; depends=[dplyr forcats gghalves ggplot2 purrr stringr tibble tidyr tidyselect]; }; - sclero = derive2 { name="sclero"; version="0.2"; sha256="1vqysby822s958msnwcqmz78193vrgmpf6si1jnfb9cj90hh7wgg"; depends=[plyr RImageJROI spatstat]; }; + scipub = derive2 { name="scipub"; version="1.2.2"; sha256="1k06pmpwpmgiglqhh9ca67m74vb961dczc9394xnwfszq9g3gz1n"; depends=[dplyr forcats gghalves ggplot2 purrr stringr tibble tidyr tidyselect]; }; sclr = derive2 { name="sclr"; version="0.3.1"; sha256="10pihx35889w509ijbyq5hzslk9n7kakjnfscg7p0dq198nbpyca"; depends=[broom dplyr purrr rlang tibble]; }; - scmamp = derive2 { name="scmamp"; version="0.2.55"; sha256="17qhj9l1akxachaimy9d5rls8adph8aalj3qr6ckip29a8ma9gf7"; depends=[ggplot2 graph reshape2 Rgraphviz]; }; scoper = derive2 { name="scoper"; version="1.1.0"; sha256="0ls1c4h7l5wk6y4yw8278rg3kyk96508pc9cd4k68kncj302xj26"; depends=[alakazam data_table doParallel dplyr foreach ggplot2 Rcpp rlang scales shazam stringi tidyr]; }; scopr = derive2 { name="scopr"; version="0.3.3"; sha256="1j45l5zcrpc4dnb6ik1v0jlqizpkijl0p656s869jhhvv55r6v2i"; depends=[behavr data_table memoise readr RSQLite stringr]; }; score = derive2 { name="score"; version="1.0.2"; sha256="1p289k1vmc7qg70rv15x05dyb92r7s6315whr1ibi40sqln62a5s"; depends=[msm]; }; - scorecard = derive2 { name="scorecard"; version="0.3.1"; sha256="08xzgf8lbc1y44hsd3461n4pd3kc78nfr0vzlzx7ghfi4i7jh2c8"; depends=[data_table doParallel foreach ggplot2 gridExtra openxlsx stringi]; }; + scorecard = derive2 { name="scorecard"; version="0.3.2"; sha256="0ab5f61684x4dwfry0ni39c46s18nrki7vjivpdd5i2gzdp6q4d1"; depends=[data_table doParallel foreach ggplot2 gridExtra openxlsx stringi]; }; scorecardModelUtils = derive2 { name="scorecardModelUtils"; version="0.0.1.0"; sha256="09znaxrv14m58hsk5pac458xbpcsidc6ygcsw4q9j0p4yd80qbvl"; depends=[car e1071 gbm ggplot2 partykit randomForest reshape2 sqldf stringr]; }; scorepeak = derive2 { name="scorepeak"; version="0.1.2"; sha256="1g9n7kjqb9qk5b7hw8ysrc069w9dzc4z29ay6z1kbm0v4kkzp7bi"; depends=[checkmate Rcpp]; }; scoring = derive2 { name="scoring"; version="0.6"; sha256="114jlpbnm15fdan5lr40adxdzwajy3yhdw6dm4kvkvky6qhcx7q5"; depends=[]; }; scoringRules = derive2 { name="scoringRules"; version="1.0.1"; sha256="0rc8nz68h56mzsr7hyga77n0i05rq3hjkzaqx78bihzcwqd9vji7"; depends=[knitr MASS Rcpp RcppArmadillo]; }; - scoringTools = derive2 { name="scoringTools"; version="0.1.1"; sha256="0vd5d7qmkd5kyai70c0d46wp1qhgx267wrw3bdjhajz2ry05cir1"; depends=[discretization dplyr magrittr sqldf]; }; + scoringTools = derive2 { name="scoringTools"; version="0.1.2"; sha256="11bxmpqiqqkjyvmyxlnzz7j64jmy1pjw06128vvydmqhjxxyawjh"; depends=[discretization dplyr magrittr sqldf]; }; scoringutils = derive2 { name="scoringutils"; version="0.1.4"; sha256="0rm618rs395v5n5cbnkqb7l903c7hyxpy5hg55b8kfmzmv891liv"; depends=[data_table forcats ggplot2 goftest scoringRules]; }; scout = derive2 { name="scout"; version="1.0.4"; sha256="0vr497g7g1xhf75cwjbjsns2fvdzy86iibbf5w0g2xylw82s4lh2"; depends=[glasso]; }; scpm = derive2 { name="scpm"; version="2.0.0"; sha256="1ib46m3i50annp90n2ih4qdxabxik4ngg9j0a5hgspsvk1i4hrvp"; depends=[interp lattice MASS Matrix mvtnorm RandomFields rgl]; }; scraEP = derive2 { name="scraEP"; version="1.1"; sha256="0dimvdjlgaymjmd3gf60hxcavpr58bpffrfhlksnrfzbb7an65dd"; depends=[data_table RCurl XML]; }; scrapeR = derive2 { name="scrapeR"; version="0.1.6"; sha256="1rqgqpn9rc43rh356z9gb51pjhdczr9a9mgv0i078nniq156rmlb"; depends=[RCurl XML]; }; + scrappy = derive2 { name="scrappy"; version="0.0.1"; sha256="0dckq2pdqabnv5cinfqgbrjxp55x4z81lp8xh4yhyb2cnz9gdsqy"; depends=[magrittr rvest xml2]; }; scrime = derive2 { name="scrime"; version="1.3.5"; sha256="0y2mh9fsffjf3i15bafpasa17z99c1s75r8g6h4hgcwfgpjx75sx"; depends=[]; }; scriptName = derive2 { name="scriptName"; version="1.0.1"; sha256="1rd3qj7c7pg454a5mxhr64g4kp15cqf5lf8lbsh9x88llvkjci5v"; depends=[purrr rlang]; }; scriptests = derive2 { name="scriptests"; version="1.0-16"; sha256="11l145gvzkxqwbzw976rq94krly1p4lahqw051dwaacarq4hnrdg"; depends=[]; }; scriptexec = derive2 { name="scriptexec"; version="0.3.1"; sha256="0k10x0npdga1nmchzz9xxv0qijnq2n9pb49z1g06bmva1z8wb4wg"; depends=[]; }; scriptuRs = derive2 { name="scriptuRs"; version="0.1.0"; sha256="1wbvfqcc0raazhdc6pyp93q859ilxfz9rz338p3sb7fjyxvparbl"; depends=[]; }; scrm = derive2 { name="scrm"; version="1.7.3-1"; sha256="090gsa23l9s4x92q4n7ggp491fc8ghgnjw5p7j67gd1i1iwr55n8"; depends=[Rcpp]; }; - scrobbler = derive2 { name="scrobbler"; version="0.2.15"; sha256="079ms94q2h8ciqi9b4w9i1md57x844jz464hk7rr564n9wcfp4gj"; depends=[httr jsonlite]; }; + scrobbler = derive2 { name="scrobbler"; version="1.0.1"; sha256="1p3rn57khr0793kydi4i7iarpkyh6y72yq3fvfnaz8kfrf3s4jym"; depends=[httr jsonlite]; }; scrollrevealR = derive2 { name="scrollrevealR"; version="0.2.0"; sha256="0k8ffapwxpb25wphm76arma095hrh3wf0gpkx1z6g4rplahf4jxa"; depends=[glue htmltools]; }; scrubr = derive2 { name="scrubr"; version="0.3.2"; sha256="1grh6gljxad2iig6vldv2j0wk83cj6v1pdqsldb6gp4kqyzbikq9"; depends=[crul curl data_table fastmatch hoardr jsonlite lazyeval magrittr Matrix qlcMatrix tibble]; }; scrypt = derive2 { name="scrypt"; version="0.1.3"; sha256="14iblgbp9v2by8fjbrpsd59iknp5babcz7j3yv1yxxzcwyb6wrrm"; depends=[Rcpp]; }; @@ -14517,49 +15082,52 @@ in with self; { sdafilter = derive2 { name="sdafilter"; version="1.0.0"; sha256="0y692j25pln46dp6xvaq17fkym0461yqfa6rv5avfw2b240k8jiq"; depends=[glasso glmnet huge POET]; }; sdat = derive2 { name="sdat"; version="1.1"; sha256="1mxijw2yfblqjvqqb2xrzhfn9c872i1q9ggw24xicvr2fk4lvjw6"; depends=[]; }; sdcHierarchies = derive2 { name="sdcHierarchies"; version="0.18.3"; sha256="0snsl790ivx21dynryscy9arc8bmfh4pigh6j9m3b8lls8alcpqz"; depends=[cli data_table jsonlite rlang shiny shinyjs shinythemes shinyTree]; }; - sdcLog = derive2 { name="sdcLog"; version="0.1.0"; sha256="0pz461jcfgcahsyaacd953gqgniwxsm664a8pnsbdj6d04mrn56w"; depends=[broom checkmate crayon data_table]; }; - sdcMicro = derive2 { name="sdcMicro"; version="5.5.1"; sha256="1jabihj878w9wk7lmbnjh9v14jdb14w6ir10ram2bprlxah0bn07"; depends=[car carData cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase shiny shinyBS VIM xtable]; }; + sdcLog = derive2 { name="sdcLog"; version="0.2.0"; sha256="1awziy3193hj2ws63fzlpa93m12hvxqd9plr4abmwhgshnj0x680"; depends=[broom checkmate crayon data_table]; }; + sdcMicro = derive2 { name="sdcMicro"; version="5.6.0"; sha256="01rm6r0cdqq8sg81q4ypk4z8fvfh60bckr16ysih4qd6yivc4mny"; depends=[car carData cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase shiny shinyBS VIM xtable]; }; sdcSpatial = derive2 { name="sdcSpatial"; version="0.1.1"; sha256="1szv2nb758k3x5scxml2ns11fi99rlmd11r3fhzy3dgylf0m0xnm"; depends=[raster]; }; sdcTable = derive2 { name="sdcTable"; version="0.31"; sha256="064aippj8p4mc1zazvkzcjz59hlfybsz6wz1ppwj6d9638ha1a96"; depends=[data_table knitr lpSolveAPI Rcpp Rglpk rlang sdcHierarchies slam stringr]; }; sdcTarget = derive2 { name="sdcTarget"; version="0.9-11"; sha256="18cf276mh1sv16xn0dn8par4zg8k7y8710byxiih6db4i616fjpi"; depends=[doParallel foreach magic tuple]; }; - sddpack = derive2 { name="sddpack"; version="0.9"; sha256="1963l8jbfwrqhqcpif73di9i5mb996r4f8smjyil6l7sdir7cg9l"; depends=[]; }; sde = derive2 { name="sde"; version="2.0.15"; sha256="0gxyhq9lafd62y68h7fd746a3jz3jdsm0shgwm2ylmp4a2f5cdmm"; depends=[fda MASS zoo]; }; sdef = derive2 { name="sdef"; version="1.7"; sha256="0x2b8shp02ik0dd11wi3jcrl9h9m963fnkfy47fwwhav9x6jg0jf"; depends=[]; }; sdetorus = derive2 { name="sdetorus"; version="0.1.7"; sha256="1ip9wi44m64qhyl5mcvpm5kk0j7qmkrh3fq572jkq8w0csg59p4b"; depends=[colorRamps mvtnorm Rcpp RcppArmadillo]; }; sdglinkage = derive2 { name="sdglinkage"; version="0.1.0"; sha256="102li274s9jjxqabk8ggv9mrdd4014d5hp0hqsna4swly8zvdcyn"; depends=[arsenal bnlearn ggplot2 reshape synthpop visNetwork]; }; sdm = derive2 { name="sdm"; version="1.0-89"; sha256="1qi2hc06wnyz9apfpbypngvs8w20r1jq3mr6l6xpjdyg6ks1m0rc"; depends=[raster sp]; }; + sdmApp = derive2 { name="sdmApp"; version="0.0.1"; sha256="0mi9nfhdl2lp6ax34xc61q05n5jnwabizad2p5shvy6jzzirngbz"; depends=[biomod2 blockCV CENFA data_table dismo DT ggcorrplot ggplot2 ggpubr haven kernlab randomForest raster readxl rgeos rhandsontable rJava sf shiny shinyBS shinyFiles sp SSDM tidyverse]; }; sdmpredictors = derive2 { name="sdmpredictors"; version="0.2.9"; sha256="1hpypfzfn0vppwkfrd1bcf2qzwl81603sf3l8xg8md25f3x9gw91"; depends=[R_utils raster RCurl rgdal]; }; sdmvspecies = derive2 { name="sdmvspecies"; version="0.3.2"; sha256="19avkag13ij1k65vqhmvcy8j50j8vrgw4mjc49x8i63w3d4z1wxh"; depends=[psych raster]; }; - sdols = derive2 { name="sdols"; version="3.0.0"; sha256="1c96fsf807qf1ah4adi5agj87gmajv2hyxnzvcz53mpr2qc72g5y"; depends=[salso]; }; + sdpdth = derive2 { name="sdpdth"; version="0.2"; sha256="1yn8fsjxpbagargf3mv0p23vsgnl64dxfkggrzvfp0ylxsx8nnvc"; depends=[Matrix matrixcalc rCMA Rcpp RcppArmadillo rJava]; }; sdprisk = derive2 { name="sdprisk"; version="1.1-6"; sha256="061x78irryc5phd8bv9cs2mfgiajgwmr85ryp1r47anadydb2haa"; depends=[numDeriv PolynomF rootSolve]; }; sdpt3r = derive2 { name="sdpt3r"; version="0.3"; sha256="02qv889mkzcilxzszzqcqgn9z5zmki0093mdriradbl1y8a27bp5"; depends=[Matrix]; }; sdtoolkit = derive2 { name="sdtoolkit"; version="2.33-1"; sha256="0pirgzcn8b87hjb35bmg082qp14idc5pfvm6dikpgkswag23hwh8"; depends=[]; }; sdwd = derive2 { name="sdwd"; version="1.0.5"; sha256="14x5hjdbkr5lsh8x3wninxg88acqh6q50famf6qjlfm7727rdysc"; depends=[Matrix]; }; - seacarb = derive2 { name="seacarb"; version="3.2.14"; sha256="0yal25d3n8m7p216rzg59g9a518zaf554yff3h806m88fiahlfxy"; depends=[gsw oce]; }; - seagull = derive2 { name="seagull"; version="1.0.6"; sha256="0bmmlxk2v82zhlxm8hj6p67capj4f4v6pdwlh09j75ca63jx36ry"; depends=[Rcpp RcppArmadillo]; }; + seacarb = derive2 { name="seacarb"; version="3.2.16"; sha256="0wyc7xbajnavcdsrf7rvh0y7blsrg7qa8swykhgw8ahv4j9f4jlb"; depends=[gsw oce]; }; + seagull = derive2 { name="seagull"; version="1.1.0"; sha256="1kmidbxzs8zrjji6wsn8nrdv5mpfmmf6q30h1w4rc0swx1ycsgx4"; depends=[matrixStats Rcpp RcppArmadillo]; }; sealasso = derive2 { name="sealasso"; version="0.1-2"; sha256="0cjy3fj170p5wa41c2hwscmhqxwkjq22vhg9kbajnq7df2s20jcp"; depends=[lars]; }; searchConsoleR = derive2 { name="searchConsoleR"; version="0.4.0"; sha256="1ffg5359pbwylw265wbahwl3hy1b0qqv4al71v5r8lgfircibn0j"; depends=[googleAuthR stringr]; }; searcher = derive2 { name="searcher"; version="0.0.5"; sha256="1q12il35pfy34n669jzkjciln1ca8by7l1d8zkzv4297547i1qln"; depends=[]; }; seas = derive2 { name="seas"; version="0.5-2"; sha256="0hn4d5dc01zyycd7l3vj1sx6bq668n7fzffw9ypaa5l20fizs0ay"; depends=[MASS]; }; season = derive2 { name="season"; version="0.3.12"; sha256="0hv4qcparkfyvwqd583lqwy7djziwi0cyaycg9ds3jjsfypwp31a"; depends=[ggplot2 MASS survival]; }; - seasonal = derive2 { name="seasonal"; version="1.7.1"; sha256="09ydl0hi4zmxdm254m7kibfll1z5bqxs0y2lrqngb08rl33xgs19"; depends=[x13binary]; }; + seasonal = derive2 { name="seasonal"; version="1.8.2"; sha256="0jzzbypwi4mby58spv99l4xrfp6zrkrylgmc6imr9ybhwh6lihws"; depends=[x13binary]; }; + seasonalclumped = derive2 { name="seasonalclumped"; version="0.3.2"; sha256="0a9ryds9l00dw6pr9s6r6fzrby53zz63idjywh127a4ga48jwnq3"; depends=[ggplot2 gridExtra magrittr TTR]; }; seasonalview = derive2 { name="seasonalview"; version="0.3"; sha256="1l705yc7ssldsfckbgnvd95sh3zzhpkmf1rr6ar2s60s3wsyly4n"; depends=[dygraphs htmlwidgets openxlsx seasonal shiny shinydashboard xtable xts zoo]; }; seastests = derive2 { name="seastests"; version="0.14.2"; sha256="04kx4sijnpsarq4iaclxvckgr5y0gmz5a0fmkkqjmfi3hm1kvw3d"; depends=[forecast xts zoo]; }; seawaveQ = derive2 { name="seawaveQ"; version="2.0.2"; sha256="1x4vvassal1lwb9xnwisrhlx2maaqxl84h7klfy8yg9x80fdrhsw"; depends=[lubridate plyr reshape2 rms survival]; }; - secr = derive2 { name="secr"; version="4.3.3"; sha256="10m3gxjw976rc4h72aw6d0z2k7spcq14rlp5h5g1d3b06r5xpyxk"; depends=[abind MASS mgcv nlme raster Rcpp RcppEigen RcppNumerical RcppParallel sp stringr]; }; + secr = derive2 { name="secr"; version="4.4.1"; sha256="1ir72gfi5wpjmkprjd7zazdhq2dyz0yxpikrsxgvg9dhhb2w0y9h"; depends=[abind MASS mgcv nlme raster Rcpp RcppEigen RcppNumerical RcppParallel sp stringr]; }; secrdesign = derive2 { name="secrdesign"; version="2.5.11"; sha256="02fysbx6w1iw2ig54f9sgr74c40wfjwiwpdmxdjymsaynqnm9anl"; depends=[abind openCR secr]; }; secret = derive2 { name="secret"; version="1.1.0"; sha256="063gpyc2s2l6zw1j8b8ppzsv9kjsf0s77s5wcn7ipmwkj8qr2g4b"; depends=[assertthat curl jsonlite openssl rprojroot]; }; secrettext = derive2 { name="secrettext"; version="0.1.0"; sha256="129v524yyb464mcij7hvzv05cxliaz5nm7v30g9g9ppskcdqhsx2"; depends=[dplyr magrittr rlang stringr testthat tidyr]; }; - secrlinear = derive2 { name="secrlinear"; version="1.1.1"; sha256="0jcvraypkss1gphh4cjb0b4v9460fj4dw80yd057ah11p9942ggs"; depends=[igraph maptools MASS rgdal secr sp]; }; - secsse = derive2 { name="secsse"; version="2.0.0"; sha256="0qsbn56vc6y19hmc94bimv1mf86ayxa8rj38qvvsxjfm9czmw2ac"; depends=[ape apTreeshape DDD deSolve doParallel foreach geiger phylobase]; }; - secuTrialR = derive2 { name="secuTrialR"; version="1.0.8"; sha256="0dlgm8v2k8b6smn84zmgscxcipw1yi18ksgdxg8zp3ckjiq7gdfn"; depends=[dplyr haven lubridate magrittr purrr readr readxl rlang stringr tibble tidyr]; }; + secrlinear = derive2 { name="secrlinear"; version="1.1.4"; sha256="1qa0vapnhiblz57jrbj9zd1gdmxc1nzzq41b4464373pjfvm5wvj"; depends=[igraph maptools MASS rgdal secr sp]; }; + secsse = derive2 { name="secsse"; version="2.0.7"; sha256="0hgrk4hvl89gmlfzabhdmxxp4k00wlciy0x0fv4k4slcskvyax8v"; depends=[ape apTreeshape DDD deSolve doParallel foreach geiger phylobase]; }; + secuTrialR = derive2 { name="secuTrialR"; version="1.0.9"; sha256="0g84jrh42kx3w1m6spw80rwx7vzjf7x1qabqap4h6ayrczacxq4r"; depends=[dplyr haven lubridate magrittr purrr readr readxl rlang stringr tibble tidyr]; }; + secure = derive2 { name="secure"; version="0.6"; sha256="1i0csl90w4qvhpnrxwrdhxzlmjw7hn30py36r41cd28igycz2bw3"; depends=[MASS Rcpp RcppArmadillo]; }; securitytxt = derive2 { name="securitytxt"; version="0.1.1"; sha256="0yrydcc68qcsq5wrdfgwfi347pdd0zc8hp2ikmw3iz31anm3b4yw"; depends=[Rcpp]; }; - see = derive2 { name="see"; version="0.6.1"; sha256="0apdz66vax3n69a3vigmhy4p71ysg0yl2qh3ws69fbnhc7xs9s40"; depends=[bayestestR dplyr effectsize ggplot2 ggridges insight magrittr parameters rlang]; }; + see = derive2 { name="see"; version="0.6.3"; sha256="0xkc7fjwy2l6hxqb3vgz5kfvlr672ia4jplhjqdds8z0lkly3fjk"; depends=[bayestestR dplyr effectsize ggplot2 ggridges insight magrittr parameters rlang]; }; seeclickfixr = derive2 { name="seeclickfixr"; version="1.1.0"; sha256="1agsqq2msrqrssffc6liyjjs6nqm90xy2inlcjbkdac5dhinjc4n"; depends=[jsonlite RCurl]; }; seecolor = derive2 { name="seecolor"; version="0.1.0"; sha256="1ijxyys8pwlm99ynmv86cgn8pzz1ivaxzh3rq1akzv17nz93jv61"; depends=[crayon dplyr fansi ggplot2 magrittr purrr rstudioapi stringr]; }; seedCCA = derive2 { name="seedCCA"; version="3.0"; sha256="076pkv083dp71m6ifjzx9spfwmc1625r9d72spf0vhf8pwwsha4v"; depends=[CCA corpcor]; }; - seededlda = derive2 { name="seededlda"; version="0.5.1"; sha256="18fidm7jz1vsa9as7grj3g7wnkvj50izah3yajwiap44bq45hpd6"; depends=[Matrix quanteda Rcpp RcppArmadillo RcppParallel]; }; + seededlda = derive2 { name="seededlda"; version="0.6.0"; sha256="1xbjwarf39w3dgsr7rr5i0q5jbza2rfaxkw66h4gg7bbi5v3kwzi"; depends=[Matrix quanteda Rcpp RcppArmadillo RcppParallel]; }; seedr = derive2 { name="seedr"; version="0.3.0"; sha256="15drbc0iplb97a2sym6jnrwij7ak5qckcw98n3m65x45apjwdmhq"; depends=[binom data_table]; }; + seedreg = derive2 { name="seedreg"; version="1.0.0"; sha256="1plva3fp0khq61w4c60yyk33wwf1rkazs92wcpf8xy9qkxa5d62p"; depends=[boot car crayon drc emmeans ggplot2 hnp multcomp multcompView]; }; seeds = derive2 { name="seeds"; version="0.9.1"; sha256="0adk7y5ripg78bwkdgnlfwq9w9h6mlpdrikgbnn5z8az2qahc0in"; depends=[callr coda Deriv deSolve dplyr ggplot2 Hmisc MASS matrixStats mvtnorm pracma R_utils Ryacas statmod tidyr]; }; seedwater = derive2 { name="seedwater"; version="2.0"; sha256="1q6q612245hqqx89jzlp77f73vj2baxi0bghd9l8kpjz4ydh6rv8"; depends=[rpanel]; }; seer = derive2 { name="seer"; version="1.1.5"; sha256="19p6gvi3g1fjzi3rb1xm4svff7nb0bcmbf4fzijvqpzkz0gpi10k"; depends=[dplyr forecast forecTheta furrr future magrittr MASS purrr randomForest stringr tibble tsfeatures urca]; }; @@ -14570,49 +15138,53 @@ in with self; { segclust2d = derive2 { name="segclust2d"; version="0.2.0"; sha256="1n5h92dza7wgfpfyzlfb7hbrqb0a8dhc38vml9645gym3a1riwn5"; depends=[dplyr ggplot2 magrittr plyr RColorBrewer Rcpp RcppArmadillo reshape2 scales zoo]; }; segmag = derive2 { name="segmag"; version="1.2.4"; sha256="1i717xg1z7s35pkwzywgjf9wx7zj9xksv0k87h7p1q62y073qbqm"; depends=[plyr Rcpp]; }; segmenTier = derive2 { name="segmenTier"; version="0.1.2"; sha256="01xbcddinjbkbqkwq2lnsxd3gw8fxys58p498dc2lw8psz3g2wgc"; depends=[Rcpp]; }; - segmented = derive2 { name="segmented"; version="1.3-1"; sha256="0g8l1i31zfqamvwc5j537k3ld6dr5z81p84grdlqq41gywmyidmr"; depends=[]; }; + segmented = derive2 { name="segmented"; version="1.3-4"; sha256="0bchqcy308kbywavgyg9kb4543rbkfn753q9c6d7l7aw7sxvyxl2"; depends=[]; }; segmentr = derive2 { name="segmentr"; version="0.2.0"; sha256="0q5kxxiw0akpk7w2a2l9zp7v4pvqblzdvrld5fjyl5f6h8hsb40z"; depends=[foreach glue Rcpp]; }; - segregation = derive2 { name="segregation"; version="0.3.0"; sha256="0bx3w2dhbikx7vk5gs0b2jc4q4zvwlrj4crv6agmc2pn3ap7i88k"; depends=[data_table]; }; + segregation = derive2 { name="segregation"; version="0.5.0"; sha256="0k7s5ph0ig7vzccqprz394h9hryn7lhd5w07lym3xp37xcpk5vc7"; depends=[data_table]; }; + segregatr = derive2 { name="segregatr"; version="0.2.0"; sha256="02hdwbahcym98f20nnxnn94xsrl4x6gzz26wrg2nhj2cq20fl4s4"; depends=[pedprobr pedtools]; }; seismic = derive2 { name="seismic"; version="1.0"; sha256="02d11c3filzghi8cvryikaidmk40d4z3qxsqs7bjdhxyf814caw8"; depends=[]; }; seismicRoll = derive2 { name="seismicRoll"; version="1.1.4"; sha256="036yvfgy6d4dppfgqd8yx08k3mb03p44hch1ihcmmramz5cvdc29"; depends=[Rcpp]; }; sejmRP = derive2 { name="sejmRP"; version="1.3.4"; sha256="1j3sadbp12fip3n96s0hx1sg4kzwx8z01p1c905kv8gffhkz9bh0"; depends=[cluster DBI dplyr factoextra RPostgreSQL rvest stringi tidyr XML xml2]; }; selac = derive2 { name="selac"; version="1.7.5"; sha256="1r9g6sdm3341r7666hfpcy17yprsyckhbmb2mpa93kkj5b6pd7pl"; depends=[ape data_table deSolve expm GenSA MASS Matrix nloptr nnet phangorn RColorBrewer seqinr statmod zoo]; }; selectMeta = derive2 { name="selectMeta"; version="1.0.8"; sha256="0i0wzx5ggd60y26lnn4qk4n8h27ahll9732026ppks1djx14cdy0"; depends=[DEoptim]; }; selectapref = derive2 { name="selectapref"; version="0.1.2"; sha256="0njibljh3hiqdn4wdb031bdg1bh3xpixgczbi5i01gaavybsq4cc"; depends=[]; }; + selection_index = derive2 { name="selection.index"; version="1.1.0"; sha256="1k31j234f0i9rgna43apgbvgd9g9g7cs6a8myzadrpjkg2zg4vj0"; depends=[]; }; selectiongain = derive2 { name="selectiongain"; version="2.0.591"; sha256="11gd9xdn3jl3mg3c9ykw8bqvcxhihn19iqsy8dl8bacijjv84bva"; depends=[mvtnorm]; }; selectiveInference = derive2 { name="selectiveInference"; version="1.2.5"; sha256="07kzpvdmflca1sriqfzn20f84fx2b9kwwiqm91lqjpx854bsx5kh"; depends=[adaptMCMC glmnet intervals MASS Rcpp survival]; }; selectr = derive2 { name="selectr"; version="0.4-2"; sha256="09y1n3iy297g49xlpl7xrjpwgnm57pskx5991lyfcpizbz8ax22m"; depends=[R6 stringr]; }; - selectspm = derive2 { name="selectspm"; version="0.2"; sha256="0wvhlzhl0janhms107xczmilpmr4y26jgk0ag3g34iqba7fbnfqd"; depends=[ecespa spatstat]; }; + selectspm = derive2 { name="selectspm"; version="0.3"; sha256="1gl7wi4wfy9rnyralf9051v5yhr27fcw45a8ib4ashcwrd5wcs9j"; depends=[ecespa spatstat spatstat_core spatstat_geom]; }; seleniumPipes = derive2 { name="seleniumPipes"; version="0.3.7"; sha256="1krpzh2gy3yl07c2n1d8q21xjc2qcv5ac1kv7212710bxkdyfad6"; depends=[httr jsonlite magrittr whisker xml2]; }; selfea = derive2 { name="selfea"; version="1.0.1"; sha256="0zyxbd5vg8nhigill3ndcvavzbb9sbh5bz6yrdsvzy8i5gzpspvx"; depends=[ggplot2 MASS plyr pwr]; }; selfingTree = derive2 { name="selfingTree"; version="0.2"; sha256="18ylxmg2ms4ccgm4ahzfl65x614wiq5id7zazjjz5y75h8gs7gzj"; depends=[foreach]; }; + selfmade = derive2 { name="selfmade"; version="0.1"; sha256="0d3v202dqr3c2564g6w7k27mhy1nxx7ngpiai7yxq2s88wa7cydi"; depends=[lme4 Matrix mgcv]; }; sem = derive2 { name="sem"; version="3.1-11"; sha256="03j3ig6fy34pi6nwfq9w8f5m555lilw5skr1vn6ay4yvjmvavc9k"; depends=[boot MASS matrixcalc mi]; }; - semEff = derive2 { name="semEff"; version="0.4.0"; sha256="0czlsz6kfkka75radz4v30jsk7jg7rif8l0fi4zdmyzrls4fm35k"; depends=[boot lme4]; }; + semEff = derive2 { name="semEff"; version="0.5.0"; sha256="1ynmyy82755lghm0l8vxyapvmfdvh18rrjgqwjf8ws2w3baz2b9p"; depends=[boot lme4]; }; semPLS = derive2 { name="semPLS"; version="1.0-10"; sha256="0q5linjyv5npkw4grx3vq58iq2q1grf06ikivhkg8w7rvb7pqn6b"; depends=[lattice]; }; semPlot = derive2 { name="semPlot"; version="1.1.2"; sha256="0l1v9yi1pv59iwfknw4dh9qskk5y8r347jq1vq13gnfd3bmd71xr"; depends=[colorspace corpcor igraph lavaan lisrelToR OpenMx plyr qgraph regsem rockchalk sem XML]; }; semPower = derive2 { name="semPower"; version="1.1.0"; sha256="091695q9s5hymnziz9sjbn0magxqb21m9z2yj97w1laaflc3m3z3"; depends=[]; }; semTable = derive2 { name="semTable"; version="1.8"; sha256="0qr420rnz59q8arf6x05iy1zyh7pv31ldi2rsw1j2a00fbpp4ndf"; depends=[kutils lavaan plyr stationery xtable]; }; - semTools = derive2 { name="semTools"; version="0.5-3"; sha256="0k3w10fnq0l89inhxvnypyrfhlrm921mfn0kwyyfpndvbqizky1d"; depends=[lavaan]; }; - semantic_dashboard = derive2 { name="semantic.dashboard"; version="0.1.8"; sha256="1d53947pfs30mdmidqpywii29i91nxqvrbjvy0qcfyd7r7al1q99"; depends=[glue htmltools shiny shiny_semantic]; }; + semTools = derive2 { name="semTools"; version="0.5-4"; sha256="15kban4ds2mssxqslm126b89p8biya14c9m68sqk61vzvx5dm2vq"; depends=[lavaan]; }; + semantic_dashboard = derive2 { name="semantic.dashboard"; version="0.2.0"; sha256="0i9l8s19bw5xj4dzq932j0lzldg725zwcxnnda9p8gp0fimkb3d2"; depends=[checkmate glue htmltools shiny shiny_semantic]; }; semdiag = derive2 { name="semdiag"; version="0.1.2"; sha256="0kjcflw7dn907zx6790w7hnf5db6bf549whfsc0c2r173kf13irp"; depends=[sem]; }; semdrw = derive2 { name="semdrw"; version="0.1.0"; sha256="16hm1ifgspnxnlf3rfg5ylmql2fq91ig8nc5953ggyhfrjwbqx15"; depends=[dplyr lavaan psych semPlot semTools shiny shinyAce]; }; semds = derive2 { name="semds"; version="0.9-6"; sha256="10kvcmcy6qa2r5sram6azqgzl528rghfxgw2f2bq2fvhhq127dzq"; depends=[minpack_lm pracma]; }; semiArtificial = derive2 { name="semiArtificial"; version="2.3.1"; sha256="1rjf8wsbwi6kfwsh89kblhl0f3m7rrma7gly7b4xm7bj7jdkljkr"; depends=[cluster CORElearn flexclust fpc ks logspline MASS mcclust nnet robustbase RSNNS StatMatch timeDate]; }; - seminr = derive2 { name="seminr"; version="1.1.0"; sha256="1j0sd9af1ay5i6wnw2slnfhfj16vn2zlyisslr95s1x16zqg8074"; depends=[lavaan MASS]; }; + seminr = derive2 { name="seminr"; version="2.0.2"; sha256="1pq3sr7rk6x96yfspz5j06v9nmsccgdgbpv8gsyp8qvfckb6cgyk"; depends=[glue lavaan]; }; + semmcmc = derive2 { name="semmcmc"; version="0.0.4"; sha256="161h6rilxkycvnpqa8xrfs6x11nzrdi5fg28sa5h0gc4ibr13p8a"; depends=[MASS msm]; }; semnar = derive2 { name="semnar"; version="0.7.1"; sha256="0g6l4377i9wdwbcrdhdmsph68bd6qwc5mjlw824mpxn0ggg6vx72"; depends=[jsonlite leaflet lubridate magrittr urlshorteneR]; }; semnova = derive2 { name="semnova"; version="0.1-6"; sha256="1vghf8gy0vahwn3nq752wm0rbj33jdy69yqjzin94sk8xa42d0wi"; depends=[lavaan MASS Matrix]; }; semsfa = derive2 { name="semsfa"; version="1.1"; sha256="1k6i1m4r9y7j85rlrsgfjm8w15ax4xgf70xyvqwsszmf9950ldxx"; depends=[doParallel foreach gamlss iterators mgcv moments np]; }; - semtree = derive2 { name="semtree"; version="0.9.14"; sha256="1gyjrvqvqmm0dcbddjq90v3gsniiz9rl66nxiayvfbkhs4pih39z"; depends=[bitops cluster digest expm ggplot2 MASS matrixcalc matrixStats mvtnorm OpenMx plotrix rpart rpart_plot sets stringr tidyr]; }; + semtree = derive2 { name="semtree"; version="0.9.15"; sha256="1lw9dx6q60izjrk3a8dbc030p8daxpsa5gkdafrlrwhy55mga7sb"; depends=[bitops clisymbols cluster crayon digest expm ggplot2 lavaan OpenMx plotrix rpart rpart_plot sandwich sets stringr strucchange testthat tidyr viridis zoo]; }; semver = derive2 { name="semver"; version="0.2.0"; sha256="10wpkyms2cix3bsin2q0qhkbl445pwwpa5gm2s4jjw1989namkxy"; depends=[assertthat Rcpp]; }; semverutils = derive2 { name="semverutils"; version="0.1.0"; sha256="0y3zh8n8bgs3ag8yy9cnp0i0xrn0iqflcbrya70glyb40148w9sw"; depends=[foreach R6]; }; - sen2r = derive2 { name="sen2r"; version="1.3.9"; sha256="1p2zqm4m8r9cs4dlh4m1fznlxa5wf7rdgpkll106xhs3qkckkcdc"; depends=[data_table doParallel foreach geojsonio httr jsonlite raster RcppTOML rgdal sf stars XML]; }; + sen2r = derive2 { name="sen2r"; version="1.4.3"; sha256="00rvs4n2p7vn9nnx7iia90lm8v6wa5i1dsga9q7x45ydxn6b5ndz"; depends=[data_table doParallel foreach geojsonio httr jsonlite raster RcppTOML rgdal sf stars XML]; }; + sendgridr = derive2 { name="sendgridr"; version="0.2.4"; sha256="1jh114llpqpij75gn5r7ss3hrdgb9a8pggxrd0nm25f1gx4yga3s"; depends=[base64enc clipr clisymbols crayon desc dplyr fs glue httr jsonlite magrittr rlang stringr tibble tidyr usethis]; }; sendmailR = derive2 { name="sendmailR"; version="1.2-1"; sha256="0z7ipywnzgkhfvl4zb2fjwl1xq7b5wib296vn9c9qgbndj6b1zh4"; depends=[base64enc]; }; - sendplot = derive2 { name="sendplot"; version="4.0.0"; sha256="0ia2xck94nwirwxi38nv0viz5wb8291yiak6f0wgwh84irsrfp1h"; depends=[rtiff]; }; sensR = derive2 { name="sensR"; version="1.5-2"; sha256="073za0z6dawba2nd45hs20m0143kckxn3iglkyqz9vdfqwyv7wlq"; depends=[MASS multcomp numDeriv]; }; sensemakr = derive2 { name="sensemakr"; version="0.1.3"; sha256="1pgzmv72jsl359lni9z0fc7szyy9aiqyi2lwkmvnc8kmqd5dmk1f"; depends=[]; }; sensiPhy = derive2 { name="sensiPhy"; version="0.8.5"; sha256="1kjkdklva5wzmw071gbn1v9g5cf0wzmvwgy5y0dgi530v6byaw8j"; depends=[ape caper geiger ggplot2 phylolm phytools]; }; sensibo_sky = derive2 { name="sensibo.sky"; version="1.0.0"; sha256="0s8gbj7qrcbcnflp7v0s93ykh2xgk7jwpyvzndj1f90hjy20x3bc"; depends=[glue httr jsonlite]; }; - sensitivity = derive2 { name="sensitivity"; version="1.23.1"; sha256="0sdk5d94nq81xkawlkrv0kq4qixhlbn81wnf25c5ak4kzakfh3jy"; depends=[boot ggplot2 numbers Rcpp RcppArmadillo]; }; + sensitivity = derive2 { name="sensitivity"; version="1.25.0"; sha256="1hs4p4dzfiga197isvr3486pwba9m3yx1f9zh9wwskh6gpczm9yx"; depends=[boot foreach ggplot2 numbers Rcpp RcppArmadillo]; }; sensitivity2x2xk = derive2 { name="sensitivity2x2xk"; version="1.01"; sha256="1r829k939zzmi0j4chdaniajchcflmmjrl3a9hwnkg0wkfnjbvdl"; depends=[BiasedUrn mvtnorm]; }; sensitivityCalibration = derive2 { name="sensitivityCalibration"; version="0.0.1"; sha256="1fn07dra7dhpsg6f1yn1ayfpmvwaxma8cps94070nrpfwmdvi04g"; depends=[ggplot2 ggrepel plotly relaimpo splitstackshape stringi]; }; sensitivityPStrat = derive2 { name="sensitivityPStrat"; version="1.0-6"; sha256="0rfzvkpz7dll3173gll6np65dyb40zms63fkvaiwn0lk4aryinlh"; depends=[survival]; }; @@ -14621,12 +15193,12 @@ in with self; { sensitivitymv = derive2 { name="sensitivitymv"; version="1.4.3"; sha256="1ga8mf92niiv1z3g3kv5ha5xdd1089aaqp19dz68kv8a396vhy1j"; depends=[]; }; sensitivitymw = derive2 { name="sensitivitymw"; version="1.1"; sha256="1bknnfkkqgmchabcjdfikm37sn5k41ar8lpnjw58i8qh7yzq237i"; depends=[]; }; sensmediation = derive2 { name="sensmediation"; version="0.3.0"; sha256="0pmhlc5aqz1vwl4fpn38nkqy63pbq6q62fk9xjja4khrq35zh9yb"; depends=[maxLik mvtnorm]; }; - sensobol = derive2 { name="sensobol"; version="0.2.2"; sha256="0j5nn5zmz7xfiv2zkik6k12w962p7m60czni9hsfndvvpvwiy2i5"; depends=[boot data_table ggplot2 magrittr matrixStats randtoolbox Rdpack rlang scales stringr]; }; + sensobol = derive2 { name="sensobol"; version="1.0.1"; sha256="0vx5qxiig2i6282bkdsywvx0ba4cryamz18qjg0p2zns0nf5xhvn"; depends=[boot data_table deSolve ggplot2 lhs magrittr matrixStats randtoolbox Rcpp RcppArmadillo Rdpack Rfast rlang scales stringr]; }; sensory = derive2 { name="sensory"; version="1.1"; sha256="1zd0ajrymxi6gygcq9fqgwgy0g6c3cqz53x0k5m0ihbmh11rc7s7"; depends=[gtools MASS Matrix]; }; senstrat = derive2 { name="senstrat"; version="1.0.3"; sha256="0j6mb55v5ivqvk8nn8fjlzrbdgj6csa58yc6gy1g07m7gk2qz2np"; depends=[BiasedUrn MASS]; }; sentencepiece = derive2 { name="sentencepiece"; version="0.1.2"; sha256="062qhvcgrl0r7lxrhjkyrncl8nihf3fkvwjish93shsrgc5596r5"; depends=[Rcpp]; }; sentimentr = derive2 { name="sentimentr"; version="2.7.1"; sha256="13myh7w9pynmgvqspsxpnj8mz8jz8nwkwjyax4hahvwb9707hf2s"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; }; - sentometrics = derive2 { name="sentometrics"; version="0.8.2"; sha256="1yrcm3wqnlcd5r4h1zwiz2wv6xl751p9h0537z8x5npf8c4clxp8"; depends=[caret data_table foreach ggplot2 glmnet ISOweek quanteda Rcpp RcppArmadillo RcppParallel RcppRoll stringi]; }; + sentometrics = derive2 { name="sentometrics"; version="0.8.4"; sha256="16j6f8n4lz4v0lhalzslvhvd2a6grj9glxhmnbcyfijwh8259vq6"; depends=[caret data_table foreach ggplot2 glmnet ISOweek quanteda Rcpp RcppArmadillo RcppParallel RcppRoll stringi]; }; sentryR = derive2 { name="sentryR"; version="1.1.0"; sha256="0kz81dbxg4zyns829cjhjm2g88pxzaaxdk7c8qabvl0zgqys2chy"; depends=[httr jsonlite stringr tibble uuid]; }; separationplot = derive2 { name="separationplot"; version="1.3"; sha256="0ggyr4asp86hvdp4bwdkljz9b2gzdxm2y9nbz2srlgh3m4hlz2cs"; depends=[foreign Hmisc MASS RColorBrewer]; }; seplyr = derive2 { name="seplyr"; version="1.0.1"; sha256="0r40z0m1ixm1l6w6alhbfzkiyvayrvwwmn0ybcshrn8rqys56q21"; depends=[dplyr rlang tidyr wrapr]; }; @@ -14639,86 +15211,96 @@ in with self; { seqgendiff = derive2 { name="seqgendiff"; version="1.2.2"; sha256="0vrmh4h2g4hvx8ix5jyc4bhp8vpr00fcqsfbf9r0808jqnlwgcnr"; depends=[assertthat cate clue irlba matchingR pdist sva]; }; seqhandbook = derive2 { name="seqhandbook"; version="0.1.0"; sha256="0zncpjabazci92wzw126i491669gidkyiw7zjp7iw23m6jaf71l4"; depends=[TraMineR]; }; seqinr = derive2 { name="seqinr"; version="4.2-5"; sha256="1z1jipgrn9nrnxlx7bcf8c2chwpa3kfva0zgyb12xbr3kisn166y"; depends=[ade4 segmented]; }; - seqmagick = derive2 { name="seqmagick"; version="0.1.4"; sha256="1m3j52mxam7kz9iqg4i43g8k2wmpbjfn06bz8bf1c98aj6zqal5s"; depends=[Biostrings magrittr]; }; + seqmagick = derive2 { name="seqmagick"; version="0.1.5"; sha256="0h1vdsx88k3mpajfv0cgswk2s1560zm6y776b4dqrdkvkcgdbb3g"; depends=[Biostrings magrittr]; }; seqminer = derive2 { name="seqminer"; version="8.0"; sha256="00jzj8mwb0zaiwlifd41b26mrq9mzigj18nc29dydi0r42hxg16i"; depends=[]; }; seqmon = derive2 { name="seqmon"; version="2.4"; sha256="1aqrg9aqvsabg5mm9jfj5vaxxaapfs1qw3yyzbx7vsspcgjdhyca"; depends=[]; }; seqtest = derive2 { name="seqtest"; version="0.1-0"; sha256="1bdfww9szh7h278id5xpfc39mxkcix3yvsdwc68wx3q3x0wxhqhq"; depends=[]; }; sequence = derive2 { name="sequence"; version="2.0"; sha256="0r5h96gcp18lwgrl2pjlr71xqspkf6qmm1m0xjq5vadalfa7y294"; depends=[]; }; sequences = derive2 { name="sequences"; version="0.5.9"; sha256="17571m525b6a3k4f0m936wfq401181gx1fpb7x4v0fhaldzdmk3a"; depends=[Rcpp]; }; sequenza = derive2 { name="sequenza"; version="3.0.0"; sha256="13l16lacdcf7fn96yj3xqxap0l19ma9ppkxxx5qk9f5abbvdk303"; depends=[copynumber iotools pbapply readr seqminer squash]; }; - sequoia = derive2 { name="sequoia"; version="2.0.7"; sha256="1lyzvxj7vdlb7p9df6lp67qn8zqn3sv5r2absrxikmxfbfdj3s09"; depends=[plyr]; }; + sequoia = derive2 { name="sequoia"; version="2.3.3"; sha256="1wga610wwgr0sx110bcd5a8l40pa1mv1s56kjy0b0pk04pv6gapb"; depends=[plyr]; }; sergeant = derive2 { name="sergeant"; version="0.9.0"; sha256="1iyb0191hkkhhsr4507b1c6j7c7z7lz1v0m2y7flc50yfxicb1fb"; depends=[bit64 DBI dbplyr dplyr htmltools httr jsonlite magrittr purrr readr scales tibble]; }; serial = derive2 { name="serial"; version="3.0"; sha256="1y1gj0lcdn5apiv6c6arks6pqhsbvnrfym6n2izjarx2c27ijrjj"; depends=[]; }; seriation = derive2 { name="seriation"; version="1.2-9"; sha256="1glxn098ar1v96xlwp85kjxzfd1nyfzp2f82x5z3fm87yv57k4lb"; depends=[cluster colorspace dendextend gclus gplots MASS qap registry TSP]; }; serieslcb = derive2 { name="serieslcb"; version="0.4.0"; sha256="1ip4k2xzg06hwsni62ai1whs1zzhwlf94507inpfpqz3jmmafrhq"; depends=[gplots shiny]; }; seroincidence = derive2 { name="seroincidence"; version="2.0.0"; sha256="0sam4y7w6prswz0izkm1a9v2k5rv7z22g1ajy15n9xix9aml5ms4"; depends=[]; }; - serpstatr = derive2 { name="serpstatr"; version="0.0.2"; sha256="1qjaws8df157qz66x1389aacpddyawgc10fm8flx9kb0kvfp3ybb"; depends=[httr]; }; + serp = derive2 { name="serp"; version="0.1.8"; sha256="02lclpb3lp1carzz9y2vm4z19zx3fj7yc3f4ldpdpipx5z4250fl"; depends=[ordinal]; }; + serpstatr = derive2 { name="serpstatr"; version="0.1.0"; sha256="1myxw3dh3mkai803dnfdd1zyr2mjzsd2pw00l1fwmmbdplqg9q20"; depends=[httr]; }; serrsBayes = derive2 { name="serrsBayes"; version="0.4-1"; sha256="0618415n2izdgv85cnmlnpwy0lz7rnimspq8986w5w1ywhw2xpbm"; depends=[Matrix Rcpp RcppEigen truncnorm]; }; servosphereR = derive2 { name="servosphereR"; version="0.1.1"; sha256="0m1fjd3f1s2ss54xmcrm3p0c33hhi2dj0vim790g4y0mw2aicc8l"; depends=[data_table dplyr magrittr purrr rlang]; }; - servr = derive2 { name="servr"; version="0.21"; sha256="12fk585hmz735v4hra8da9wld1fmd67byqnf95m7jjyh7l3dmh1z"; depends=[httpuv jsonlite mime xfun]; }; + servr = derive2 { name="servr"; version="0.22"; sha256="1vnlkbf8s55rfgz7qp2dd84pf9zw94qmdx25rl6i7jybhsxmb71h"; depends=[httpuv jsonlite mime xfun]; }; sesem = derive2 { name="sesem"; version="1.0.2"; sha256="0b1xzv38wpkhhlq87xrvlh45b8ksbi8bg4ar5hrf8gxa19r9rmi5"; depends=[gplots lavaan mgcv]; }; session = derive2 { name="session"; version="1.0.3"; sha256="04mcy1ac75fd33bg70c47nxqxrmqh665m9r8b1zsz5jij1sbl8q5"; depends=[]; }; sessioninfo = derive2 { name="sessioninfo"; version="1.1.1"; sha256="0j5f3l58fynxx3v0w62vqpii7miabszgljpja36xx9s8hikh8sqn"; depends=[cli withr]; }; - set = derive2 { name="set"; version="1.1"; sha256="0b6qzy3mqf2gfc5gjrn1k6k7ymprjzs2i948zsgcqdkgr8acasbm"; depends=[do]; }; - set6 = derive2 { name="set6"; version="0.2.0"; sha256="1y8gs5nyjm5vm4kq9fx9xndwjp7n2xabxa1vdnzm77srlmhxdc7r"; depends=[checkmate R6 Rcpp]; }; + set = derive2 { name="set"; version="1.2"; sha256="0f36dp9k0nxp1amsd7ybwgbv0vxvgd1kns7cbfsbsh0kljxyplzp"; depends=[do]; }; + set6 = derive2 { name="set6"; version="0.2.1"; sha256="05c2s8wj10nv07p9617grdhsf5ijwpv82r0d2f76p0sbcx3d46qm"; depends=[checkmate R6 Rcpp]; }; setRNG = derive2 { name="setRNG"; version="2013.9-1"; sha256="02198cikj769yc32v8m2qrv5c01l2fxmx61l77m5ysm0hab3j6hs"; depends=[]; }; sets = derive2 { name="sets"; version="1.0-18"; sha256="16v7650p47khqrbbw0z98llmwmmhswqmhri0n7nrfhdqwmby1lbl"; depends=[]; }; setter = derive2 { name="setter"; version="0.0-1"; sha256="10fwrx8yysp99rrkbnn3rbz79vyzr2h3p7zxxlqapw1k2lllp0r5"; depends=[assertive_base]; }; settings = derive2 { name="settings"; version="0.2.4"; sha256="092sv6nccm6p2d695l9w0zfi2xgymk12c8p8lhl9nb86mxrb3nry"; depends=[]; }; sever = derive2 { name="sever"; version="0.0.6"; sha256="0za9xdzmp2hbiq83wp0gjrzb2k180mgmvjzh1jldhrjpz7cvdbnk"; depends=[cli shiny]; }; severity = derive2 { name="severity"; version="2.0"; sha256="1mp19y2pn7nl9m8xfljc515kk5dirv0r2kypazpmd956lcivziqq"; depends=[]; }; - sf = derive2 { name="sf"; version="0.9-6"; sha256="01yqlnx9v7lzb6g4ywjlncz67cnkizszarnf2dmd4fi8abhw4zs9"; depends=[classInt DBI magrittr Rcpp units]; }; + sf = derive2 { name="sf"; version="0.9-8"; sha256="096gg2hbynn6mv3w8n69x987fklg5rrgd0d4nbqaw7vhg1jhlmqi"; depends=[classInt DBI magrittr Rcpp units]; }; sfa = derive2 { name="sfa"; version="1.0-1"; sha256="1acqxgydf8j5csdkx0yf169x3yaa31r0ccdrqarh6vj1hacm89ad"; depends=[]; }; + sfaR = derive2 { name="sfaR"; version="0.1.0"; sha256="1lgazgj6xfg0syspw6wzmd4xyczydhdgghpaf9kgrqvqfkaqcf8p"; depends=[dplyr emdbook fBasics Formula gsl marqLevAlg MASS maxLik moments nleqslv numDeriv primes qrng randtoolbox trustOptim ucminf]; }; sfadv = derive2 { name="sfadv"; version="1.0.1"; sha256="1rfpm6km5pckwhqgpvidm6qsj5sjdaqqj5b0sgvpslivfa4c80cr"; depends=[gmm minpack_lm]; }; sfc = derive2 { name="sfc"; version="0.1.0"; sha256="0cm4mfcfd9bhf2j5fppsihzrfipnldb6q3xradd88z9pwgrkfx2a"; depends=[dplyr sna tidyr triangle zoo]; }; - sfdct = derive2 { name="sfdct"; version="0.0.6"; sha256="0ilh89mfwp1yqn44yn80vz1a6g65hryk6w87ngzvak3pd6jxq6aa"; depends=[dplyr RTriangle sf sp tibble]; }; + sfcr = derive2 { name="sfcr"; version="0.1.1"; sha256="106rw6y8gyknc7jxx10ixwbclzng6isiv74cg1gi64zh2xfbhbzk"; depends=[dplyr expm forcats igraph kableExtra magrittr purrr Rcpp RcppArmadillo Rdpack rlang rootSolve stringr tibble tidyr tidyselect vctrs]; }; + sfdct = derive2 { name="sfdct"; version="0.1.0"; sha256="0p3ipp6x8vnsi94078n098yk9wglnawvzh19imcgk2c1l5lazwgf"; depends=[dplyr RTriangle sf sp tibble]; }; sfheaders = derive2 { name="sfheaders"; version="0.4.0"; sha256="0ig02nszrs6fkjkrkqibp23n4a8qr4i09yz7l741yjd0308ddg46"; depends=[geometries Rcpp]; }; sfinx = derive2 { name="sfinx"; version="1.7.99"; sha256="14v47y00qwvc2s0vzjw19hwn85nzj8lna539c75qq6zkn6kir6va"; depends=[]; }; - sfo = derive2 { name="sfo"; version="0.1.0"; sha256="11d1h30zak494szxpi851k30bv7s38dic4ndh39q4k03lhl35bxz"; depends=[]; }; - sfsmisc = derive2 { name="sfsmisc"; version="1.1-7"; sha256="12g6m8sf17q3qmm133nm4fa296w5n5d9ly3fvb2nvc0w4llkif3l"; depends=[]; }; + sfnetworks = derive2 { name="sfnetworks"; version="0.5.1"; sha256="1r62jmd6gbl60p404d3fdlrz6v7b2gsibqvfiqy3pfkkjn38b4ma"; depends=[crayon dplyr igraph lwgeom rlang sf sfheaders tibble tidygraph units]; }; + sfo = derive2 { name="sfo"; version="0.1.1"; sha256="0ja0kyrr6vqwk9fj1hq9bvfkak2vgav0hlqpgn4sa9h9j1s8r4js"; depends=[]; }; + sfsmisc = derive2 { name="sfsmisc"; version="1.1-11"; sha256="1qm39v2a41rgiv1hxwxl06grgbmjgg3r2ch5df3zsf82rs9fv2n7"; depends=[]; }; sft = derive2 { name="sft"; version="2.2-1"; sha256="0fxz64ba58n6ghfqsgq64n1c7qkvi8c3lsa86732mil9w71yxw33"; depends=[fda SuppDists]; }; sftrack = derive2 { name="sftrack"; version="0.5.2"; sha256="1mh4m4z18wnhar88f5amkdwvfsbdx1qjyylf9jp4hm371a76sawg"; depends=[sf]; }; sgPLS = derive2 { name="sgPLS"; version="1.7"; sha256="1jk2j1zn5vq82rcjflnk7g6y2q0v5jl14k804dmigqg013gbykql"; depends=[mixOmics mvtnorm]; }; + sgat = derive2 { name="sgat"; version="0.9"; sha256="14sniq5yfh7xmbnd8d0ighw97352qjgfdg587a6hxafisx9is61p"; depends=[data_table dplyr plyr qdapRegex RCurl RSelenium stringr]; }; sgd = derive2 { name="sgd"; version="1.1.1"; sha256="055khw3jr7kr8la3jpzq1q25gk0qcclkv7g0q1sylhyqq2qdriwb"; depends=[BH bigmemory ggplot2 MASS Rcpp RcppArmadillo]; }; sgee = derive2 { name="sgee"; version="0.6-0"; sha256="055iydainzywb1s5id5rl9i94dj5arr9b6qz15p8wps49vm2mlp3"; depends=[copula mvtnorm]; }; sgeostat = derive2 { name="sgeostat"; version="1.0-27"; sha256="1iq9p2jk8bpv1h853a1l91d5c5dxnhkk3cmkd01siqqvj04hv4vb"; depends=[]; }; sglOptim = derive2 { name="sglOptim"; version="1.3.8"; sha256="15bkkvgp9v9vsp65wps48g3c2fa0fj1025hbrziywq14j7wayyjr"; depends=[BH doParallel foreach Matrix Rcpp RcppArmadillo RcppProgress]; }; sglasso = derive2 { name="sglasso"; version="1.2.4"; sha256="0sdarn39857405ndmqyka5ksvwczb5ifl5aap96wpm625iz2a1pi"; depends=[igraph Matrix]; }; - sglg = derive2 { name="sglg"; version="0.1.8"; sha256="0dh55164kbd83bd5k7qlla041s5wl7y33csdsp5vmrjwxs357hb2"; depends=[AdequacyModel Formula ggplot2 gridExtra moments pracma survival]; }; + sglg = derive2 { name="sglg"; version="0.1.9"; sha256="06509jlskqxk9m64xz65q467pc85wpv3479s17sg2h7yhh71i9yy"; depends=[AdequacyModel Formula ggplot2 gridExtra moments pracma survival]; }; sglr = derive2 { name="sglr"; version="0.7"; sha256="11gjbvq51xq7xbmpziyzwqfzf4avyxj2wpiz0kp4vfdj3v7p4fp9"; depends=[ggplot2 shiny]; }; sgmcmc = derive2 { name="sgmcmc"; version="0.2.5"; sha256="0lq79c7i6bklh8c63wx3k6h9mk8s1abbr0hc41drcm96bbbg0aal"; depends=[reticulate tensorflow]; }; sgmodel = derive2 { name="sgmodel"; version="0.1.1"; sha256="1i13vp91i8s61ylsyg0iij1sfclwif7v91slr2srl8ddz6lm23nx"; depends=[ggplot2 ramify Rtauchen]; }; sgof = derive2 { name="sgof"; version="2.3.2"; sha256="020kc6h9iw4qhb9pdi7wk8vcy54dp10x0z3nlq3gwwbj1l9izc44"; depends=[poibin]; }; sgpv = derive2 { name="sgpv"; version="1.1.0"; sha256="0w0slnnw239a34c0h7xr76c4m0rfwl0hq61g9n12vzxd6lfh3gqz"; depends=[]; }; sgr = derive2 { name="sgr"; version="1.3"; sha256="0zxmrbv3fyb686hcgfy2w1w2jffxf41ab8yc90dsgf931s9c55wn"; depends=[MASS]; }; + sgstar = derive2 { name="sgstar"; version="0.1.1"; sha256="12g50h31mp80d696338m5kfhfgy5i9siavrs8dnxvqha832cynm4"; depends=[dplyr ggplot2 nlme tidyr]; }; sgt = derive2 { name="sgt"; version="2.0"; sha256="0qb3maj5idwafs40fpdfrwzkadnh5yg8fvfzfs51p9yy69kbmlkx"; depends=[numDeriv optimx]; }; shades = derive2 { name="shades"; version="1.4.0"; sha256="1zg95sjhrfvbdlfc387g9p0vnb8nb6agdk1mb3wq3kwkm2da0bqj"; depends=[]; }; - shadow = derive2 { name="shadow"; version="0.7.0"; sha256="04lgl6np880i564sabz9s9sykijk0q0na0pnhgbnw1zqxznxl42i"; depends=[raster rgeos sp]; }; - shadowtext = derive2 { name="shadowtext"; version="0.0.7"; sha256="1s1ip8zfr684a3ld7hvf524bhn2j31k6d1wbhh1ni0flsggv2ckf"; depends=[ggplot2 scales]; }; + shadow = derive2 { name="shadow"; version="0.7.1"; sha256="055064jwxf9fkvw95w8if5aqcxrgg3b224qs1c81v8m8adr46v0r"; depends=[raster rgeos sp]; }; + shadowtext = derive2 { name="shadowtext"; version="0.0.8"; sha256="16lhhd7q1qz82grkq1q4fn5mkq8nphh4wvva4jijrl605cd6cc7v"; depends=[ggplot2 scales]; }; shallot = derive2 { name="shallot"; version="0.4.10"; sha256="05ciafpahcrsh9kwg1yqwbmanvkbv1i1cjjpvq3w4cdqkhn4fam7"; depends=[commonsMath rscala]; }; shape = derive2 { name="shape"; version="1.4.5"; sha256="17qqhjyfhxv9la07ykaslb50c8g4d0cgfypx4y91h9i2yjw7jjh9"; depends=[]; }; + shapeNA = derive2 { name="shapeNA"; version="0.0.2"; sha256="1ivp8kvnacr2fx3rs7ckzdpinb6bifzzw7riskzj95lygjlkvabw"; depends=[]; }; shapeR = derive2 { name="shapeR"; version="0.1-5"; sha256="17fq4gsdvyniq7n4x1xdvb5kk50184i7why3pdf1djjhknym087j"; depends=[gplots jpeg MASS pixmap vegan wavethresh]; }; shapefiles = derive2 { name="shapefiles"; version="0.7"; sha256="08ghndihs45kylbzd9wnxffn8ixvxjhjnjldjyd526ai2sj8xcgf"; depends=[foreign]; }; - shapes = derive2 { name="shapes"; version="1.2.5"; sha256="0gfpdydfysp5mwg7qmkn73s67gvh2szb40mzqrx97h41ijgcgd8s"; depends=[MASS minpack_lm rgl scatterplot3d]; }; + shapes = derive2 { name="shapes"; version="1.2.6"; sha256="1p9fr95zk3q2v277c5ksb0nh26mcpzwjzjb2lmag51z6hck8cb66"; depends=[MASS minpack_lm rgl scatterplot3d]; }; shapper = derive2 { name="shapper"; version="0.1.3"; sha256="1jaj9j894md45611gdrz05n0kfakawf7vlcc3zxhwdh3f7kwz4lp"; depends=[DALEX ggplot2 reticulate]; }; - shapr = derive2 { name="shapr"; version="0.1.3"; sha256="1v0zwmlycrq89g9i8pwa37m200pc2rmscvgqv1lkkigcy1i09h0g"; depends=[condMVNorm data_table Matrix mvnfast Rcpp RcppArmadillo]; }; - shar = derive2 { name="shar"; version="1.1"; sha256="157b1pia21qygb7pqb97v8b3bklnfq40xf8y7wg6p2ixkab0ws6c"; depends=[classInt raster Rcpp spatstat]; }; - sharpData = derive2 { name="sharpData"; version="1.2"; sha256="0pvaq8i1vrra3d0wf6yyqkbin0zgsd1kvdzh4bfnyps6pzn5k789"; depends=[KernSmooth quadprog]; }; - sharpeRratio = derive2 { name="sharpeRratio"; version="1.4.1"; sha256="1sh4lrgj3hmw0pfw5xvvfs2jd8f694vy3ad5krwz4rh76ywja7q0"; depends=[ghyp Rcpp]; }; + shapr = derive2 { name="shapr"; version="0.2.0"; sha256="1zzg58m38rkqsynczy5jwz97ph3s85aa975ffi4i5vml82zlhc4y"; depends=[condMVNorm data_table Matrix mvnfast Rcpp RcppArmadillo]; }; + shar = derive2 { name="shar"; version="1.2.1"; sha256="0n0xmp4j3lhddczh84bflg1l61p31n7skj57krg5i0xjhr2dav11"; depends=[classInt raster Rcpp spatstat_core spatstat_geom]; }; + sharpData = derive2 { name="sharpData"; version="1.4"; sha256="1pnza52wqczjds4vp2fy9ky41y7lyj9ywam11nsr0mpv63jglnc5"; depends=[KernSmooth quadprog]; }; + sharpPen = derive2 { name="sharpPen"; version="1.7"; sha256="1nhmxfyrzmm6qgwrlfc046lm9n8n5r62ym44956zg2z1m2vhnysf"; depends=[glmnet KernSmooth MASS Matrix np]; }; + sharpeRratio = derive2 { name="sharpeRratio"; version="1.4.2"; sha256="1l0ix779kzci647v4irxs0j83zwfchd51k8576ivis7cr5f1a9v6"; depends=[ghyp Rcpp]; }; sharpr2 = derive2 { name="sharpr2"; version="1.1.1.0"; sha256="1r7anfr296l5sbhgry6rb15hlca6mpcm24qssdzz9bckavyfvqgi"; depends=[Matrix mvtnorm]; }; - sharpshootR = derive2 { name="sharpshootR"; version="1.6.5"; sha256="00xwrkls4qlcxdzb6l7a268n6i96xp3ipn96nbc2y7n4cj2635xy"; depends=[ape aqp circular cluster curl digest e1071 Hmisc igraph lattice plyr RColorBrewer reshape2 scales soilDB sp stringi vegan]; }; + sharpshootR = derive2 { name="sharpshootR"; version="1.8.1"; sha256="0pii2wcy18mdvbfdhylh9rgzb9vqafxkbs54awv7qs32yg51kw3k"; depends=[ape aqp circular cluster curl digest e1071 Hmisc igraph lattice plyr RColorBrewer reshape2 scales soilDB sp stringi vegan]; }; sharx = derive2 { name="sharx"; version="1.0-5"; sha256="10sfjg6946jfk4051da0w1v89503av40wckqaabr12syf8kn0aw8"; depends=[dclone dcmle Formula]; }; shattering = derive2 { name="shattering"; version="1.0.4"; sha256="1wafbmmx1xgiqb7zwm67z4868gmsyi1rg1mxlrgszvxalypqb6g7"; depends=[FNN pdist pracma rmarkdown Ryacas slam]; }; + shatteringdt = derive2 { name="shatteringdt"; version="0.1.0"; sha256="06f7mgfr0yy1k2hk0qb8dv7af8w6m6jg95k75grmy2qakly34xvp"; depends=[rpart testthat tree]; }; shazam = derive2 { name="shazam"; version="1.0.2"; sha256="0v4a2i4fgdj6r2hlrnnn53xm22w9py4psf75i8iyx6nlbbbfbn4q"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress rlang scales seqinr stringi tidyr tidyselect]; }; shelltrace = derive2 { name="shelltrace"; version="3.5.1"; sha256="1xgbavaa26185i6q3907ds3bzq4xrw027x1sw5vsybqrxdz04jiz"; depends=[bmp tiff xlsx]; }; shiftR = derive2 { name="shiftR"; version="1.5"; sha256="18y2qzqx8hd6yph1wnsq4ygm16pcdszynh174xsrxrhvx2h9mi4x"; depends=[]; }; shinipsum = derive2 { name="shinipsum"; version="0.1.0"; sha256="0d94189hmg0bl8x0s8fpba5gcvb95sr9k9lbp3kk8482fc5h147n"; depends=[attempt DT dygraphs ggplot2 magrittr plotly]; }; - shiny = derive2 { name="shiny"; version="1.5.0"; sha256="17lf56s2ycnz0amw8r32wrfhxy9zimz5xdysxxbc52c38kx8pjr3"; depends=[commonmark crayon digest fastmap glue htmltools httpuv jsonlite later mime promises R6 rlang sourcetools withr xtable]; }; + shiny = derive2 { name="shiny"; version="1.6.0"; sha256="16dvhkbl29cqc2dz4sp1mjaxd3gis3vcixqxrjysl46ncxnxgmwb"; depends=[bslib cachem commonmark crayon digest ellipsis fastmap glue htmltools httpuv jsonlite later lifecycle mime promises R6 rlang sourcetools withr xtable]; }; shiny_i18n = derive2 { name="shiny.i18n"; version="0.2.0"; sha256="0gwdrbdsibffq314pzws2gr74fp701kb3rwdiwxbzzg0pgqpiwp3"; depends=[glue jsonlite R6 rstudioapi shiny stringr yaml]; }; shiny_info = derive2 { name="shiny.info"; version="0.2.0"; sha256="162wvb02z5h1y7xgsyl6wv88zlfmbm1jlnz48f56fyybs54baw41"; depends=[git2r glue shiny]; }; shiny_pwa = derive2 { name="shiny.pwa"; version="0.2.0"; sha256="01nsvz40zazhycpj9kg0pvxink4p0j8iqcw1dzz8zbj54lw3sjk8"; depends=[htmltools readr shiny urltools]; }; - shiny_router = derive2 { name="shiny.router"; version="0.2.0"; sha256="1gy1hk2v1b2zj0aql4f2wy4d3hy2zghd70v04iq9kig5n3qddj2d"; depends=[htmltools magrittr shiny]; }; - shiny_semantic = derive2 { name="shiny.semantic"; version="0.4.0"; sha256="0lwmj0wg4fh92yk0zqjz60da6z5wbn2rxz6vaql3g8yx5djvmbc3"; depends=[glue htmltools htmlwidgets jsonlite magrittr purrr R6 shiny]; }; + shiny_router = derive2 { name="shiny.router"; version="0.2.2"; sha256="1jxk1hxi42kyi5dahszhl9nzppa99svk1vhwf2d15apfrg2d6ivc"; depends=[htmltools magrittr shiny]; }; + shiny_semantic = derive2 { name="shiny.semantic"; version="0.4.2"; sha256="0ndjp8c3c8kci8rzhj4bg1zpgwzcilgbjplx0sr2hii87lpi0v2j"; depends=[glue htmltools htmlwidgets jsonlite magrittr purrr R6 shiny]; }; + shiny_worker = derive2 { name="shiny.worker"; version="0.0.1"; sha256="1l30dx46s3q1x9nd42r6dracd3lqkjk80r9jyjqy8lmdsq48300i"; depends=[future R6 shiny]; }; shinyAce = derive2 { name="shinyAce"; version="0.4.1"; sha256="1m33dfm2kjirvgix7ybv1kbzgjkicdpv411g9c0q3fw6rnyhfxxn"; depends=[jsonlite shiny]; }; shinyBS = derive2 { name="shinyBS"; version="0.61"; sha256="0rhim4mbp4x9vvm7xkmpl7mhb9qd1gr96cr4dv330v863ra2kgji"; depends=[htmltools shiny]; }; shinyChakraSlider = derive2 { name="shinyChakraSlider"; version="0.1.0"; sha256="1vsbw9dm8ai2w6mfdaksxh13ryh2awajqgkcwcxb99l47h17rvpy"; depends=[htmltools reactR shiny]; }; @@ -14728,77 +15310,84 @@ in with self; { shinyFeedback = derive2 { name="shinyFeedback"; version="0.3.0"; sha256="0cqp3a2nngbvrr04ajavnmpbr366zb11iwni4fs8v6ymx8v1wmd7"; depends=[htmltools jsonlite shiny]; }; shinyFiles = derive2 { name="shinyFiles"; version="0.9.0"; sha256="0rsijlx16vd74r7bd8s9zipy71kgpw19v9s85kxj5bmwc6njmbai"; depends=[fs htmltools jsonlite shiny tibble]; }; shinyHeatmaply = derive2 { name="shinyHeatmaply"; version="0.2.0"; sha256="1n7c7dvvb9kqay2phcf0bkwi990x1cjl7js6pq05xx7rli5bc5h4"; depends=[dplyr heatmaply htmltools plotly readxl rmarkdown shiny xtable]; }; + shinyIRT = derive2 { name="shinyIRT"; version="0.1"; sha256="01x7nhjs1dx2ldwznhbavc5vzqhgkn73xg395vlf2hgzbxa2ydvj"; depends=[irtoys magrittr mirt psych readxl shiny shinycssloaders shinydashboard]; }; shinyKGode = derive2 { name="shinyKGode"; version="1.0.5"; sha256="004zwz4kqfijzvvwkq8v1gi25w1wrdlg8230g93w36gbi6cl2vk1"; depends=[ggplot2 gridExtra KGode mvtnorm pracma pspline reshape2 shiny shinyjs XML]; }; shinyKnobs = derive2 { name="shinyKnobs"; version="0.1.3"; sha256="1rxlvq4vr87krf7d6mpx0y53hyz8q1jnx6nv7mlhc1ck13q6fgac"; depends=[htmltools shiny]; }; shinyLP = derive2 { name="shinyLP"; version="1.1.2"; sha256="1sjcll10ciq6pj9h8c6ybjqp8763wc423hddlalcblxxpajf6avz"; depends=[shiny]; }; - shinyML = derive2 { name="shinyML"; version="1.0.0"; sha256="157p75ba3xhgid5kbdph1fclvk0691n98rad4nwr5hdp8ahq7rcv"; depends=[argonDash argonR data_table dplyr DT dygraphs ggplot2 h2o lifecycle lubridate plotly shiny shinycssloaders shinydashboard shinyjs shinyWidgets sparklyr tidyr]; }; + shinyML = derive2 { name="shinyML"; version="1.0.1"; sha256="086iavycv1gd6scfsixf7cmw0s5a4dc6x5cylfasxrzgiixd76c9"; depends=[argonDash argonR data_table dplyr DT dygraphs ggplot2 h2o lubridate plotly shiny shinycssloaders shinyjs shinyWidgets sparklyr tidyr]; }; shinyMatrix = derive2 { name="shinyMatrix"; version="0.4.0"; sha256="1fyrh25d8x61dkgbxlgm70nlr77far34kf8af3phqnhmdxjjrpdj"; depends=[jsonlite shiny]; }; shinyMergely = derive2 { name="shinyMergely"; version="0.1.0"; sha256="04bzrg4n0s3izm3aa2jb141ikvf7gn3qmbjajqcms1i9zyw12y4s"; depends=[shiny]; }; - shinyMobile = derive2 { name="shinyMobile"; version="0.7.0"; sha256="1yrqwrz8ml6wssk0zi8wr4cpmff2d1g3msx0sv8k6mzyknl9d489"; depends=[htmltools jsonlite magrittr shiny]; }; + shinyMobile = derive2 { name="shinyMobile"; version="0.8.0"; sha256="0vsgw3pr5q2xckkhwnxj8g246ha11qkw3v422p153q3gzs8yqwpz"; depends=[htmltools jsonlite magrittr shiny]; }; shinyMolBio = derive2 { name="shinyMolBio"; version="0.2"; sha256="09lq5pvis450il1agcq5n9cilnq84rfv08w2dz1d0bbq1qgrgnvg"; depends=[checkmate dplyr plotly purrr RColorBrewer RDML shiny stringr whisker]; }; shinyMonacoEditor = derive2 { name="shinyMonacoEditor"; version="1.1.0"; sha256="12inzz9vrxi1465l82fafjva198qxyzwailx1s0fm58cqzhnqxr6"; depends=[shiny]; }; shinyNotes = derive2 { name="shinyNotes"; version="0.0.1"; sha256="1l0nw6xac410109jrr88a62a5fhv6h6xaql19bp0h8qxyc2fppjh"; depends=[DBI dbplyr dplyr magrittr RSQLite shiny shinyjs shinyWidgets stringr]; }; + shinyPredict = derive2 { name="shinyPredict"; version="0.1.1"; sha256="086dawnwzhcfz4l555j8wvy46f8h939y17c0glm86i339jszzra3"; depends=[]; }; shinyRGL = derive2 { name="shinyRGL"; version="0.1.0"; sha256="07llg1yg5vmsp89jk60ly695zvxky6n06ar77mjxzlyc294akwmy"; depends=[rgl shiny]; }; + shinyRadioMatrix = derive2 { name="shinyRadioMatrix"; version="0.2.0"; sha256="1y45qj0229s2q7rkd443axg95bfzpjxdndk16irlgddfrzvrhs6r"; depends=[shiny]; }; shinySIR = derive2 { name="shinySIR"; version="0.1.2"; sha256="1g2xcm0n7chswrnw9zq3wz6mimzzf6avhkp1rcd24ga809346jcd"; depends=[deSolve dplyr ggplot2 shiny tidyr]; }; shinySearchbar = derive2 { name="shinySearchbar"; version="1.0.0"; sha256="1v80380vym31aw0i1ghwlbdi2xkf3n59w2as62ywqi79025x3w6y"; depends=[jsonlite shiny]; }; shinyShortcut = derive2 { name="shinyShortcut"; version="0.1.0"; sha256="101wz9s4rk7fbaqgm0r2v3v8za20vdxwq4vhkz8xr7y5pr65sxiq"; depends=[]; }; shinyTime = derive2 { name="shinyTime"; version="1.0.1"; sha256="1d830wf7d5ki7frbr1vgy9d0vllyfcylq7pfkspjkz64b2xfhah3"; depends=[htmltools shiny]; }; shinyTree = derive2 { name="shinyTree"; version="0.2.7"; sha256="0jfx2capckv7hf2yx3fn8i4rcmhi222ah91jnmhg497x8wgz31s3"; depends=[htmlwidgets jsonlite promises shiny stringr]; }; - shinyWidgets = derive2 { name="shinyWidgets"; version="0.5.4"; sha256="107gqf5ijwyma7np736imkv1hg82n2hv9mnrfd2j08rhpgjny3q2"; depends=[htmltools jsonlite shiny]; }; + shinyWidgets = derive2 { name="shinyWidgets"; version="0.6.0"; sha256="140g5vz1hsfqldy1f7nwnnqk759m07z92fmlhl5w2va6niv4hjkn"; depends=[bslib htmltools jsonlite sass shiny]; }; shinyaframe = derive2 { name="shinyaframe"; version="1.0.1"; sha256="1flhgsm4q7p5acb41v73pf8ni92y9dwdppxjb9czlz1sxwf03p1s"; depends=[htmltools htmlwidgets shiny]; }; shinyalert = derive2 { name="shinyalert"; version="2.0.0"; sha256="0b392nb6vknbc88dqbkymxs7gcjd5cm2312dw7jwvmmwh8949wm7"; depends=[htmltools shiny uuid]; }; shinyanimate = derive2 { name="shinyanimate"; version="0.3.0"; sha256="0vshid5mfq006cprjj61d0g7ajyc3plc66x55c5jjmijwbp6pw7a"; depends=[shiny]; }; shinybootstrap2 = derive2 { name="shinybootstrap2"; version="0.2.1"; sha256="17634l3swlvgj1sv56nvrpgd6rqv7y7qjq0gygljbrgpwmfj198c"; depends=[htmltools jsonlite shiny]; }; - shinybrms = derive2 { name="shinybrms"; version="1.5.0"; sha256="0lyaqzlmg7msf72kpywjzpj7pqs6fnxklnl219csv47jy7wm1lk7"; depends=[brms rstan shiny]; }; + shinybrms = derive2 { name="shinybrms"; version="1.5.1"; sha256="0vqgfgf0r8w2mrzf5m7a0gk3c214gvcfq6r819vwlkl0n3pdz69d"; depends=[brms rstan shiny]; }; shinybusy = derive2 { name="shinybusy"; version="0.2.2"; sha256="06vfkv382xcpjh30i7d4ym4vyravadp5vjsvrnw4npy0302pdmzl"; depends=[htmltools htmlwidgets jsonlite shiny]; }; shinycssloaders = derive2 { name="shinycssloaders"; version="1.0.0"; sha256="0r3xm273lhdhzbs2mkgw1m2kwb7z1dh1pzya8yxy5vacda1l2ikl"; depends=[digest glue shiny]; }; shinycustomloader = derive2 { name="shinycustomloader"; version="0.9.0"; sha256="1klx71vr26g0gjf6hbiia1qidqii5d467i1sdjvlrg1hxdcggqff"; depends=[glue shiny]; }; shinydashboard = derive2 { name="shinydashboard"; version="0.7.1"; sha256="0khac8b27q3swdw07kl609hm0fjfjsjv591b388q99mqqr2rk92i"; depends=[htmltools promises shiny]; }; - shinydashboardPlus = derive2 { name="shinydashboardPlus"; version="0.7.5"; sha256="0g0cw07z7dlpc7q2abis0cdgwk6vlya0im5lxai82v21r60i5biy"; depends=[htmltools shiny shinydashboard]; }; + shinydashboardPlus = derive2 { name="shinydashboardPlus"; version="2.0.1"; sha256="1kbqrsds7spm702zsdz4975227gf6yzqm6k7xhjqx9sin48ba9av"; depends=[fresh htmltools lifecycle shiny shinydashboard waiter]; }; shinydisconnect = derive2 { name="shinydisconnect"; version="0.1.0"; sha256="14m83y1iv7qvs1hilc0d18q46qnsciflypgm4dsj7vlvh7ilpdvm"; depends=[checkmate glue htmltools shiny]; }; shinydlplot = derive2 { name="shinydlplot"; version="0.1.3"; sha256="1mvhx8f5800d33vl9kgs5mib003aqshb8vgfy9h4qlgxyx35zssk"; depends=[htmltools htmlwidgets plotly shiny shinyBS shinyjs]; }; + shinydrive = derive2 { name="shinydrive"; version="0.1.1"; sha256="10g96pvq04sddygdj9pa9hdh1ng71pinlqpkf5r77n70mv8wqqs2"; depends=[DT htmltools knitr R_utils shiny yaml]; }; shinyfilter = derive2 { name="shinyfilter"; version="0.1.0"; sha256="0gsyfx13lc6a27jwxq3fkvl5szla4hs1rwjiwj13mz0rcc6ly836"; depends=[reactable shiny shinyBS shinyjs stringr]; }; - shinyfullscreen = derive2 { name="shinyfullscreen"; version="1.0.0"; sha256="107np0i617ldw0iayw7wqcnrh7szva7zxl915qmj75kh8i7q1fn1"; depends=[jsonlite shiny]; }; + shinyfullscreen = derive2 { name="shinyfullscreen"; version="1.1.0"; sha256="0wx3jhma27701k4cmmls46rfvnix5zylxf09wdn7h6v3zdwvicq8"; depends=[jsonlite shiny]; }; shinyglide = derive2 { name="shinyglide"; version="0.1.2"; sha256="0i98k3gl83kfzp3vs1his05idhwj1n0bw98ik7d62cgn4rqi6ar4"; depends=[htmltools shiny]; }; shinyhelper = derive2 { name="shinyhelper"; version="0.3.2"; sha256="1c4hvf19j3yyh8r12nx85ldkxs89g98q74csnqs5ml5l79a65vgp"; depends=[markdown shiny]; }; shinyhttr = derive2 { name="shinyhttr"; version="1.1.0"; sha256="1snrl7bg1bc5jxqs1c5a2ir6qnf1nq576aigk19k0ms4gb9hh66m"; depends=[httr shinyWidgets]; }; - shinyjqui = derive2 { name="shinyjqui"; version="0.3.3"; sha256="0n4ijxmkp8x6dwrsxwvx0zgd8b5129cmn6q6rrav38v1q5k8889x"; depends=[htmltools htmlwidgets jsonlite shiny]; }; + shinyjqui = derive2 { name="shinyjqui"; version="0.4.0"; sha256="0ins0pmfis34jr0rimsp1k1aw856r3xjdnsvv8lkwqhvp58nzqah"; depends=[htmltools htmlwidgets jsonlite shiny]; }; shinyjs = derive2 { name="shinyjs"; version="2.0.0"; sha256="1zzq356dvd8ciajy6r5n4ybgx9xk7ydwv25j86xlcsqznkxdkkf2"; depends=[digest htmltools jsonlite shiny]; }; - shinyloadtest = derive2 { name="shinyloadtest"; version="1.0.1"; sha256="0k9b57wm2cv78qf9qryqr1s0p7gsncn8axd285f6rrayg4czb40l"; depends=[curl dplyr getPass ggplot2 glue gtable htmltools httpuv jsonlite lubridate magrittr progress R6 readr rlang rmarkdown scales stringr svglite tibble websocket xml2]; }; + shinyloadtest = derive2 { name="shinyloadtest"; version="1.1.0"; sha256="0684p9anbc3qdn4rqkxp33nm0d04zb264b3blwa23pa5akis2klq"; depends=[curl dplyr ggplot2 httpuv jsonlite magrittr R6 rlang scales stringr svglite vroom websocket xml2]; }; shinylogs = derive2 { name="shinylogs"; version="0.1.7"; sha256="1b4p0g1vf9wn643rybf382mw6mrrl49qsykh7npa3agcarwznmgr"; depends=[anytime bit64 data_table DBI digest htmltools jsonlite nanotime RSQLite shiny]; }; shinymanager = derive2 { name="shinymanager"; version="1.0.300"; sha256="1zv8rrplp3cknyk51m5cfmkr992k9cbjh89pmrbb8c24izqilq2a"; depends=[billboarder DBI DT htmltools openssl R_utils R6 RSQLite scrypt shiny]; }; shinymaterial = derive2 { name="shinymaterial"; version="1.2.0"; sha256="0nqakim0cx722sydbv12kgva1nis7h2i0lrvi9c0h54733x7lbza"; depends=[jsonlite sass shiny]; }; shinyobjects = derive2 { name="shinyobjects"; version="0.2.0"; sha256="0fg5gyssia2fqar635vrqgfwpfrk4pqachsgg10y13ljp09lcdm3"; depends=[dplyr glue knitr magrittr pander purrr readr rlang rstudioapi shiny stringr styler tibble tidyr]; }; - shinypanel = derive2 { name="shinypanel"; version="0.1.2"; sha256="09wfn46z4n96696n7zlbvm5ai2ii2vyvmsjfswqv33sp8f3c4p95"; depends=[htmltools jsonlite shiny shinyBS shinyjs]; }; + shinypanel = derive2 { name="shinypanel"; version="0.1.4"; sha256="0hdfpjfhyqj7ym3bwg5xmhnawl98q7mfl2wj950ysajqi88l91pr"; depends=[htmltools jsonlite shiny shinyBS shinyjs]; }; shinypanels = derive2 { name="shinypanels"; version="0.5.0"; sha256="1rslz9wl3gx11dm6il77j4k5swxvcfy5mf0zffbs4zk8xjgpzzj6"; depends=[glue htmltools shiny shinyjs]; }; - shinyr = derive2 { name="shinyr"; version="0.2.6"; sha256="16bknhab23by0h1b6c9q6rzyzyqnrcjhpsgw0gv427jycap9b0vv"; depends=[caret corrplot DMwR dplyr e1071 knitr nnet plotly randomForest RColorBrewer shiny shinydashboard tm wordcloud]; }; + shinypivottabler = derive2 { name="shinypivottabler"; version="1.0"; sha256="04mdzd0j9y1w0iifpgd870haj5b9q8sdmkj4lws0svhkli3ym097"; depends=[colourpicker htmltools openxlsx pivottabler shiny]; }; shinyrecap = derive2 { name="shinyrecap"; version="0.1.0"; sha256="1mic7azxz2in67g3a2ir550w8psh6kc75p6hja6m62a0yy7j2n92"; depends=[CARE1 coda conting dga future ggplot2 ipc LCMCR promises Rcapture reshape shiny shinycssloaders testthat]; }; shinyrecipes = derive2 { name="shinyrecipes"; version="0.1.0"; sha256="1b4l27qsl1lpssh3jv1pqmw2mq8hanfj0m269yp5618nd5nxd2ck"; depends=[dplyr DT esquisse miniUI purrr recipes rstudioapi shiny shinyglide shinyWidgets sortable stringr tidyr]; }; shinyreforms = derive2 { name="shinyreforms"; version="0.0.1"; sha256="1g1blc57c6zkca0m52bqkw8jwgpplabns07x1cwkk46dmv6sgqci"; depends=[htmltools R6 shiny]; }; shinyscreenshot = derive2 { name="shinyscreenshot"; version="0.1.0"; sha256="0s0rq6v6dkh6n5dvjzayjmh9jzjndf4d3zixaya9skv22z5gcj0y"; depends=[jsonlite shiny uuid]; }; shinyservicebot = derive2 { name="shinyservicebot"; version="0.1.0"; sha256="18xbggiai6ssyl3q0nqhnszxb7zlbffaw0iy3r7vbzswzqx522la"; depends=[digest htmltools htmlwidgets shiny]; }; shinystan = derive2 { name="shinystan"; version="2.5.0"; sha256="18alf5kiqw7y2l6m5nxxizwc2znsf9frxfsqhvgcad8hld9cbya5"; depends=[bayesplot colourpicker DT dygraphs ggplot2 gridExtra gtools markdown reshape2 rsconnect rstan shiny shinyjs shinythemes threejs xtable xts]; }; - shinytest = derive2 { name="shinytest"; version="1.4.0"; sha256="1kgj6izhj385vlw59agdgq1knvjyaawpghsnfmbixsmlzfr3jpzn"; depends=[assertthat callr crayon debugme digest htmlwidgets httpuv httr jsonlite parsedate pingr R6 rematch rstudioapi shiny testthat webdriver withr]; }; - shinythemes = derive2 { name="shinythemes"; version="1.1.2"; sha256="12miz44n2zxfswnia7p8dirxj3miw0aqn4pkx2111ikz67ax84rf"; depends=[shiny]; }; + shinysurveys = derive2 { name="shinysurveys"; version="0.1.2"; sha256="1ijzgi81637kprcj1vbmyx00621aj3h4f9wzjd4cg9wpln1yr2yh"; depends=[sass shiny shinyjs]; }; + shinytest = derive2 { name="shinytest"; version="1.5.0"; sha256="179x3d4vnpgv78a4g0g813msmwjy952jn6abzb8fk199h8sr3yjc"; depends=[assertthat callr crayon debugme digest htmlwidgets httpuv httr jsonlite parsedate pingr R6 rematch rlang rstudioapi shiny testthat webdriver withr]; }; + shinythemes = derive2 { name="shinythemes"; version="1.2.0"; sha256="0qr9bfxw8afxns44i2j4msignf6g5qb2nzpay2lpv343rrlqbmip"; depends=[shiny]; }; shinytoastr = derive2 { name="shinytoastr"; version="2.1.1"; sha256="01j2z4gf1wxblrjayykwxdr2s8394i7k930x8g4hmrj7c9pv264n"; depends=[shiny]; }; shinyypr = derive2 { name="shinyypr"; version="0.0.2"; sha256="1k6jsw6gnpwk90hkpa9grki0b68cab57vbd0h6ldjqr11giwcz8z"; depends=[bsplus chk dplyr DT ggplot2 lifecycle magrittr purrr readr shiny shinyjs waiter ypr]; }; - shipunov = derive2 { name="shipunov"; version="1.12"; sha256="13gzp3l06a3ayly4qrfjn70669vlm8rxsgx6iwhcm5qnmz3vi2xn"; depends=[PBSmapping]; }; + shipunov = derive2 { name="shipunov"; version="1.14"; sha256="0dpk71nz6qhg9khyvcwppc6r71az4wbnm349735990ql8isyr3vy"; depends=[PBSmapping]; }; shock = derive2 { name="shock"; version="1.0"; sha256="11m52al591xjznl62q1waxsg5m1a1afmd0yqcc5zsjlrplykg4lp"; depends=[capushe GGMselect glasso igraph mvtnorm]; }; shopifyr = derive2 { name="shopifyr"; version="1.0.0"; sha256="05hih1v5vvr7vmwarizsdx8517g74s96fdsz3klcz3g12idx1nqn"; depends=[curl jsonlite R6]; }; shortcuts = derive2 { name="shortcuts"; version="1.4.0"; sha256="0y77napfz1v3s667cmyn8357xg5lncbw1hc3hm5kra6nalhq1jps"; depends=[rstudioapi]; }; shorts = derive2 { name="shorts"; version="1.1.4"; sha256="17wb6awfcvfx76cbrj67v7lklkf1dbwivy55cl83vy6xnbxiw4j1"; depends=[ggplot2 LambertW nlme tidyr]; }; - shotGroups = derive2 { name="shotGroups"; version="0.7.5.2"; sha256="11l71difk2vyjb4ypp8y2yvfqxx57p0lvbxxzr6r3qwyr70aivln"; depends=[boot coin CompQuadForm KernSmooth robustbase]; }; + shotGroups = derive2 { name="shotGroups"; version="0.8.1"; sha256="17lmdyimz4wsv284520qwb3f2ah7lg2w22rqswkqg0c46sy46gzm"; depends=[boot coin CompQuadForm KernSmooth robustbase]; }; showimage = derive2 { name="showimage"; version="1.0.0"; sha256="1c0x3iqjdjsz3cdhc02b3qm2pwxjr1q2k87jwvxj9lnzzw81f1pl"; depends=[png]; }; - showtext = derive2 { name="showtext"; version="0.9-1"; sha256="1hq346k2lm7rv49hw7srn3ab5gcp6b0r4zc1kgsdmswyh3q1asra"; depends=[showtextdb sysfonts]; }; + showtext = derive2 { name="showtext"; version="0.9-2"; sha256="0y5mw6ffk92r7b22irrfhdmj4hxfl0d1wjxj14hznbapc4qm6f0z"; depends=[showtextdb sysfonts]; }; showtextdb = derive2 { name="showtextdb"; version="3.0"; sha256="0hlnc3fhgrdkd46n7hb6id0gg1v0bf8s4679nrr7rchyp455szq2"; depends=[sysfonts]; }; shp2graph = derive2 { name="shp2graph"; version="0-5"; sha256="1l9mg98hkb0bvr5dzd2p26g8mw5hqjxrym2gmbm10kyapvccfk56"; depends=[igraph maptools sp]; }; shrink = derive2 { name="shrink"; version="1.2.1"; sha256="0pd967wsys8fd7gyvr9y08km118yamfk5c1a1i2k8nr2ifpqmy0w"; depends=[MASS mfp rms survival]; }; shrinkTVP = derive2 { name="shrinkTVP"; version="2.0.1"; sha256="114b59lgn048sg5zs1shwgzh7q55dcgnhs3y1cd1wl77r3kpy3vs"; depends=[coda GIGrvg Rcpp RcppArmadillo RcppProgress stochvol zoo]; }; shuffle = derive2 { name="shuffle"; version="1.0.1"; sha256="0aqb11h340picx7z2jg3k46l3pr6fkknlpyzc0z89hhrc90pss48"; depends=[]; }; shuffleCI = derive2 { name="shuffleCI"; version="0.1.0"; sha256="1n9k28m1fcnw1my9a7v0gy9waygd48lab45vj9k2wwijbc325zai"; depends=[plotrix]; }; + shutterplot = derive2 { name="shutterplot"; version="0.1.0"; sha256="129jv20m0dinb07lwiz9fxv4z7sxshcmjab2g0p5vrv8jlp9a0yv"; depends=[]; }; shutterstock = derive2 { name="shutterstock"; version="0.1.0"; sha256="1vqbrjbwl2gdcf607f51cdzkjbkmk11n08mzx01j7bwcd278ny8r"; depends=[httr jsonlite]; }; siar = derive2 { name="siar"; version="4.2"; sha256="1c4z72jr81dzkp9xqyrrkwjsalvvksl67pnbaadkc52v84fhzx3r"; depends=[bayesm coda hdrcde MASS mnormt spatstat]; }; sicegar = derive2 { name="sicegar"; version="0.2.3"; sha256="0q0sp3aqvd4jh8ncfnls194iqikyxyk28zsyq65jkqd8z26s2dq4"; depends=[dplyr fBasics ggplot2 minpack_lm]; }; + siconfir = derive2 { name="siconfir"; version="1.0.5"; sha256="0xmn8rjlfqjr73qgdm5zih6hf52f5qy4n9zgqdmfmkv73a2pnam1"; depends=[dplyr httr magrittr purrr tibble tidyr]; }; sideChannelAttack = derive2 { name="sideChannelAttack"; version="1.0-6"; sha256="1xcsy1h8gc8a4f9nzs7zv8x6v55g1pg8vy1kg64iqxm0gnz2f20l"; depends=[ade4 corpcor infotheo MASS mmap]; }; sidier = derive2 { name="sidier"; version="4.0.3"; sha256="0pfzx0a5f597iqigq9xidm9b9xv18zaiqa35yp4xlk1y7gv0nj6c"; depends=[ape ggmap ggplot2 gridBase igraph network]; }; sidrar = derive2 { name="sidrar"; version="0.2.5"; sha256="04i061kfzk2qpdz8z7igj0i53387rj3xv6q7xzdyginkn67mrj5m"; depends=[magrittr RCurl rjson rvest stringr xml2]; }; @@ -14807,24 +15396,23 @@ in with self; { sievetest = derive2 { name="sievetest"; version="1.2.3"; sha256="17qrm7axvlr2yzp8brbibp26f8qdpqm85hc2kjzxm5zqwfvd6dfs"; depends=[]; }; sig = derive2 { name="sig"; version="0.0-5"; sha256="084wwpj5mnmq4k98ijbv23z80sj4axadc7c6hn3917dazsaa6ngn"; depends=[]; }; sigInt = derive2 { name="sigInt"; version="0.2.0"; sha256="1y3qbfsynssam05q4947zqd0dkrpcnq5pla409i3xy511wv9702d"; depends=[Formula MASS maxLik pbivnorm randomForest stringr xtable]; }; - sigQC = derive2 { name="sigQC"; version="0.1.21"; sha256="0794xvkz4fd81gqqpxzn5njv3d34nfxy0jl5zpixlnz0ap4c9vhx"; depends=[biclust circlize class cluster ComplexHeatmap fmsb gplots gridGraphics GSVA KernSmooth lattice MASS mclust moments nnet RankProd]; }; + sigQC = derive2 { name="sigQC"; version="0.1.22"; sha256="17b16mjadmsbqbai90bvryydkfy9k5ww9i65a5ahy3bfjch851f2"; depends=[biclust circlize class cluster ComplexHeatmap fmsb gplots gridGraphics GSVA KernSmooth lattice MASS mclust moments nnet RankProd]; }; sigclust = derive2 { name="sigclust"; version="1.1.0"; sha256="0151v7lr4n4yyn93j0s06gzc9jh9xhdgvfw6kvpfy24jl6wdii7g"; depends=[]; }; sigmaNet = derive2 { name="sigmaNet"; version="1.1.0"; sha256="1i0xikwad9kiyrqxi1klkc4h4hyqfkxr388sw4mrx9pswfpbv3xr"; depends=[htmlwidgets igraph jsonlite RColorBrewer]; }; sigmajs = derive2 { name="sigmajs"; version="0.1.5"; sha256="1d26llpgnj687b8rwgbyhw88zakp334n4a9gabf72qwrg4awm1v5"; depends=[crosstalk dplyr htmltools htmlwidgets igraph jsonlite magrittr purrr scales shiny]; }; - sigminer = derive2 { name="sigminer"; version="1.1.0"; sha256="1jw40x5bq2ra7jypid82hsf087vi7hdanc5pagl8y4ginhy929l1"; depends=[cli cowplot data_table dplyr foreach furrr future ggplot2 ggpubr maftools magrittr NMF purrr Rcpp rlang tidyr]; }; + sigminer = derive2 { name="sigminer"; version="2.0.0"; sha256="0f58rryqcaqj298pjl0hzka8r35jd7d69lmjqjsr5xahnfaxk6pp"; depends=[cli cowplot data_table dplyr furrr future ggplot2 ggpubr maftools magrittr NMF purrr Rcpp rlang tidyr]; }; sigmoid = derive2 { name="sigmoid"; version="0.3.0"; sha256="1sa6nmip3fizdk3r47pvx0h3qldn267arpmid0wa1pb7k5j2g682"; depends=[]; }; signal = derive2 { name="signal"; version="0.7-6"; sha256="1vsxramz5qd9q9s3vlqzmfdpmwl2rhlb2n904zw6f0fg0xxjfq3b"; depends=[MASS]; }; signalHsmm = derive2 { name="signalHsmm"; version="1.5"; sha256="1d4v6cbvcbi8pb5zmn58s01h3jb0kv7yr7qvcnx4p2v82knvhik7"; depends=[Rcpp seqinr shiny]; }; signmedian_test = derive2 { name="signmedian.test"; version="1.5.1"; sha256="05n7a4h2bibv2r64cqschzhjnm204m2lm1yrwxvx17cwdp847hkm"; depends=[]; }; - signnet = derive2 { name="signnet"; version="0.7.0"; sha256="145wfpgxrx81rrx20nakf43wvhy3gzcshlr532y1idgba2kdw2fr"; depends=[igraph Matrix Rcpp RcppArmadillo]; }; + signnet = derive2 { name="signnet"; version="0.7.1"; sha256="06mzscjaay0wib8mmnbcacj8zy84nx9p00i8gcpr4nklxfarib3w"; depends=[igraph Matrix Rcpp RcppArmadillo]; }; signs = derive2 { name="signs"; version="0.1.2"; sha256="0dzf5pydvs93rvj6idw9l2asv1bxwz20df7qis2db84hfww2kc6m"; depends=[rlang scales]; }; - sigora = derive2 { name="sigora"; version="3.0.5"; sha256="1240q42kpb4l1idanywzal7c85kp3ncdl5m2irh8qs5xrs02gdc7"; depends=[]; }; sigr = derive2 { name="sigr"; version="1.1.3"; sha256="19hcxk6iksfjyc4qch4sw0rgn54salirw7a0bap9c53nxzrj8bl4"; depends=[wrapr]; }; - siland = derive2 { name="siland"; version="2.0.4"; sha256="02cj3hw755253p28sxzh92qj7jwl7dffs3kibis1ij52h7wlaw38"; depends=[fasterize ggforce ggplot2 lme4 raster reshape2 sf sp]; }; + siland = derive2 { name="siland"; version="2.0.5"; sha256="1896zlfzps35mvhzbd4invpdp39cxhs13lklx56k35l4v2zvh24g"; depends=[fasterize ggforce ggplot2 lme4 raster reshape2 sf sp]; }; silicate = derive2 { name="silicate"; version="0.7.0"; sha256="1x8l6wvymx3scwzym9h6b5wgprjinzp6m2cs6r7xn9aqcr39499a"; depends=[crsmeta decido dplyr gibble gridBase magrittr purrr rlang tibble unjoin]; }; sim1000G = derive2 { name="sim1000G"; version="1.40"; sha256="1avq6xfc34izavvp9vb5ccc2b9nc4m7cwr06ygnsmpgwi5nswbb8"; depends=[hapsim MASS readr stringr]; }; sim2Dpredictr = derive2 { name="sim2Dpredictr"; version="0.1.0"; sha256="0q1l75h1dcxnd60lcmf4sny1ywidfmm0yv9ylkb3yc13v469167i"; depends=[car dplyr ggplot2 magrittr MASS matrixcalc Rdpack spam tibble tidyverse]; }; - simEd = derive2 { name="simEd"; version="1.0.3"; sha256="1yq0qblrz0zddx682rzwdaa0k0r223i123la7wbp73spnn38g4br"; depends=[rstream]; }; + simEd = derive2 { name="simEd"; version="2.0.0"; sha256="0rsagk77qgxfjjkqrg2kv88cg9z3gnjff7k1558psvbvc50d3cmg"; depends=[rstream shape]; }; simExam = derive2 { name="simExam"; version="1.0.0"; sha256="10p3y67cli5is2gj23cjy8y7zpbnn2jbxmfiq01ls0hc1jind82w"; depends=[Matrix msm]; }; simFrame = derive2 { name="simFrame"; version="0.5.3"; sha256="154d4k6x074ib813dp42l5l8v81x9bq2c8q0p5mwm63pj0rgf5f3"; depends=[lattice Rcpp]; }; simIReff = derive2 { name="simIReff"; version="1.0"; sha256="0yi43splda8chnh4bq5x6chbrl5c0y9sv1k2m31763da0czayall"; depends=[bde extraDistr ks MASS np rvinecopulib truncnorm]; }; @@ -14833,6 +15421,7 @@ in with self; { simMP = derive2 { name="simMP"; version="0.17.3"; sha256="1pzg79dd08ds3pfzxnk9h95gaibicv00mnm0jb4i8v5is4gzrdhr"; depends=[Biostrings BSgenome doParallel foreach GenomeInfoDb GenomicRanges IRanges XVector]; }; simMSM = derive2 { name="simMSM"; version="1.1.41"; sha256="04icijrdc269b4hwbdl3qz2lyxcxx6z63y2wbak1884spn6bzbs8"; depends=[mvna survival]; }; simPATHy = derive2 { name="simPATHy"; version="0.4"; sha256="1blvgaadp7iz0mcgax2xc8wa7aa9f82q09qym1wl8xdv01m29b80"; depends=[ggm graph gRbase htmlwidgets igraph mvtnorm qpgraph R_utils shiny shinydashboard]; }; + simPH = derive2 { name="simPH"; version="1.3.13"; sha256="086060f78f1dmpa6cyhx160blchckplw04gs6997f1hwzswci2l2"; depends=[data_table dplyr ggplot2 gridExtra lazyeval MASS mgcv quadprog stringr survival]; }; simPop = derive2 { name="simPop"; version="1.2.1"; sha256="1rpjyffs7s40wlyv77ha6r282p08kp7x252nfiasbgxp5c7x17i0"; depends=[colorspace data_table doParallel e1071 EnvStats fitdistrplus foreach laeken lattice MASS nnet party plyr ranger Rcpp RcppArmadillo vcd VIM wrswoR]; }; simSummary = derive2 { name="simSummary"; version="0.1.0"; sha256="1ay2aq6ajf1rf6d0ag3qghxpwj0f8b3fhpr2k0imzmpbyag1i3gj"; depends=[abind gdata svUnit]; }; simTargetCov = derive2 { name="simTargetCov"; version="1.0.1"; sha256="0gdqqwg9i2hga6l4s5x7wbbsm20b3sgwrci1g6hc04x1h9aawiw2"; depends=[MASS]; }; @@ -14847,37 +15436,41 @@ in with self; { simest = derive2 { name="simest"; version="0.4"; sha256="1wp08dkbshn5parq69d7iizp4g16qzpdim37kcg09pgsc3aghwaj"; depends=[cobs nnls]; }; simex = derive2 { name="simex"; version="1.8"; sha256="1849wayygyqv0fh1i2qva7ggh2yah2nn0sgbcy9pldxrjq8q9iw0"; depends=[]; }; simexaft = derive2 { name="simexaft"; version="1.0.7.1"; sha256="0n3n2g07pnpcqhbrjf78lbvqvc136g7jxlx6q27vnk96kwizh3f1"; depends=[mvtnorm survival]; }; - simfinR = derive2 { name="simfinR"; version="0.2.2"; sha256="16ran6br8n7b7f74a7ayzhkmnhak5z1cwli3s1b1mzdii937k8bb"; depends=[crayon dplyr jsonlite lubridate magrittr memoise purrr]; }; + simfinR = derive2 { name="simfinR"; version="0.2.3"; sha256="1swlgwmd5frz72i3vjv7am8s6vr6i7mv76j7hxffk3l7xmq7y53s"; depends=[crayon digest dplyr jsonlite lubridate magrittr memoise purrr]; }; simfinapi = derive2 { name="simfinapi"; version="0.1.0"; sha256="1g6zi4nj2rkwcd8wnnxc4riqdmf5aarry2jwwsm44i0s4s14z8s8"; depends=[checkmate data_table future_apply httr memoise RcppSimdJson]; }; simglm = derive2 { name="simglm"; version="0.8.0"; sha256="18phhsq5i9xsx4m0qml8jls9zlcnf3nifn24a7mdbr8l7z1ykf04"; depends=[broom dplyr future_apply Matrix purrr rlang]; }; - simhelpers = derive2 { name="simhelpers"; version="0.1.0"; sha256="0imrp8zqdpyl466fywkjr4g3h9jzxfk96xrw8prlsvw1xlg6qrmm"; depends=[dplyr furrr future magrittr purrr Rdpack rlang rstudioapi tibble tidyr]; }; + simgof = derive2 { name="simgof"; version="1.0.2"; sha256="05d7im59i193f266kqy4lr37dw3v20j9niizhj9w8z1qlfqfqsrk"; depends=[ddst]; }; + simhelpers = derive2 { name="simhelpers"; version="0.1.1"; sha256="0hnqvymmyimh6244r8a8qmmsb799pgj6j6yvgdnhvjmss8ymif9d"; depends=[dplyr furrr future magrittr purrr Rdpack rlang rstudioapi tibble tidyr]; }; simmer = derive2 { name="simmer"; version="4.4.2"; sha256="1zffksln9d77h59lbbqk8lbrjlhvic7ianw1912vj6bsvh5k6jjy"; depends=[BH codetools magrittr Rcpp]; }; simmer_bricks = derive2 { name="simmer.bricks"; version="0.2.1"; sha256="1s73mfmpjz91n932kjk50aai5j3p1sjibq73yxrjdhlyhiy4d8lp"; depends=[simmer]; }; simmer_plot = derive2 { name="simmer.plot"; version="0.1.16"; sha256="15snsxbljapk1br3psd6ypwa34a6x57zrblgpjyihpaivpxcz7m6"; depends=[DiagrammeR dplyr ggplot2 scales simmer tidyr]; }; - simml = derive2 { name="simml"; version="0.1.0"; sha256="0j3vv3kp8rl4an6r0vzzn6syzi9h058v9040pshz0hldkhi21pby"; depends=[mgcv plyr]; }; - simmr = derive2 { name="simmr"; version="0.4.2"; sha256="0mvckg5jz3fhjrpr97zn4jrcv3pxay53f5cpqy0d92h2lqpsgaff"; depends=[bayesplot boot compositions ggplot2 MASS R2jags reshape2 viridis]; }; + simml = derive2 { name="simml"; version="0.2.0"; sha256="0w3f1mn0mb5ag1kfcz58gwzlplq7yq020g29sv9rr3yhqsc844mr"; depends=[mgcv]; }; + simmr = derive2 { name="simmr"; version="0.4.5"; sha256="0kv3ip0yq3r2a9dglx0pkjvg5bkf9fg2x051dp6z0ld1c0f4p6ms"; depends=[bayesplot boot checkmate compositions ggplot2 MASS R2jags reshape2 viridis]; }; simode = derive2 { name="simode"; version="1.2.0"; sha256="0wlnd01xfdqvjfvmkhkj6nvkrnv5ghjv4md5nhaqsjc8bycawyl0"; depends=[deSolve pracma quadprog]; }; - simpleCache = derive2 { name="simpleCache"; version="0.4.1"; sha256="1prhahphyb4dg9qv813ahpwfngmr9blirb97pvypc5npzvahj5lv"; depends=[]; }; + simpleCache = derive2 { name="simpleCache"; version="0.4.2"; sha256="0zayq4n8cc0xgszckjvvf55ygy8hwywv161pp8pqi2k4z91rq4lz"; depends=[]; }; + simpleMH = derive2 { name="simpleMH"; version="0.1.0"; sha256="02arll0w39b4cz7gslka26lvjg90xy83kqiyvm4gxnsbw7s9hkyr"; depends=[mvtnorm]; }; + simpleMLP = derive2 { name="simpleMLP"; version="1.0.0"; sha256="134h217d3ipzpxgj5fh04pkajqmxdnnlr53ykk27vi86dqk4087p"; depends=[ggplot2 readr]; }; simpleNeural = derive2 { name="simpleNeural"; version="0.1.3"; sha256="01q04807qws870x1qhvlr3bp0dawy8q4bh00psakhln9j9dl1ljm"; depends=[]; }; - simplePHENOTYPES = derive2 { name="simplePHENOTYPES"; version="1.2.4"; sha256="08pkz6959zhfg7yd5qyfcwi4p4rzbq8gbm0jmkf15ynpica4kknj"; depends=[data_table gdsfmt lqmm mvtnorm SNPRelate]; }; + simplePHENOTYPES = derive2 { name="simplePHENOTYPES"; version="1.3.0"; sha256="0f5mzlx6vcvq6cvyz4v9yr1k2acgnxizg8clsxdm6hpi4maizrpk"; depends=[data_table gdsfmt mvtnorm SNPRelate]; }; simpleRCache = derive2 { name="simpleRCache"; version="0.3.2"; sha256="0ldmxa5rw1kcb24swnk8s471ww11jfbscynaahnnsi0zzqmhwirk"; depends=[digest]; }; simpleSetup = derive2 { name="simpleSetup"; version="0.1.0"; sha256="0rbzmixk76b3lgi9m7ijhcl6dha7wbbxfgwdhnp2y338zny6c6rm"; depends=[]; }; simpleboot = derive2 { name="simpleboot"; version="1.1-7"; sha256="0769dmrk8rw5v9598p7xlpawybwsdxnrqkxhavqpzy1vwg885575"; depends=[boot]; }; simplecolors = derive2 { name="simplecolors"; version="0.1.1"; sha256="1m0lrvkjqjqq7kynjl8j1cn7kqzfjx6gzgjpjk1gvar2g4ip0a8h"; depends=[colorspace dplyr forcats ggplot2 magrittr stringr]; }; simplegraph = derive2 { name="simplegraph"; version="1.0.0"; sha256="1gcpbljp1fgaprxnmq23izf1h2x3p5dnxlylwqsnlcj50bvm46gq"; depends=[]; }; - simplevis = derive2 { name="simplevis"; version="2.0.0"; sha256="00nyc9ql3c2072nfc4ai5g0grxnch2yb54m1qr7xvphjb4sdrr4k"; depends=[dplyr DT forcats ggplot2 htmltools janitor jsonlite leaflet leaflet_extras leafpop lubridate magrittr plotly readr rgdal rlang rmarkdown scales sf shiny shinycssloaders stars stringr tibble tidyr viridis]; }; + simplegraphdb = derive2 { name="simplegraphdb"; version="2021.03.10"; sha256="0573hrv23nimmf3d8dgdynii79h84a3mfr4xxk3cggxhsxpfmb2i"; depends=[DBI rjson RSQLite]; }; + simplevis = derive2 { name="simplevis"; version="3.0.0"; sha256="0v23m1qcf7x05c3nd14cnjzvmx821w68r888g8vz2qjk3sh20c02"; depends=[dplyr DT forcats ggplot2 htmltools janitor jsonlite leaflet leaflet_extras leafpop lubridate magrittr plotly readr rgdal rlang rmarkdown scales sf shiny shinycssloaders stars stringr tibble tidyr viridis]; }; simplexreg = derive2 { name="simplexreg"; version="1.3"; sha256="1zkh00xbddhgz0qn0a5pj12n0hpx4f5kihpfj71x92pmxpzglcxh"; depends=[Formula plotrix]; }; simplextree = derive2 { name="simplextree"; version="1.0.1"; sha256="18jvzcz4fdsi17j7qdqpjvx6zygvlcvpziikb8qxskaib5180l08"; depends=[magrittr Rcpp]; }; - simputation = derive2 { name="simputation"; version="0.2.4"; sha256="16adh97hfszvf934lf8mvwxvx71s7gwhzzhsbqz24zqik20pd6fq"; depends=[gower MASS rpart]; }; + simputation = derive2 { name="simputation"; version="0.2.6"; sha256="0r52avvl5cydmyz5x4l69m97wgd2kicyp2qxxa9x9yjallib890x"; depends=[gower MASS rpart]; }; simr = derive2 { name="simr"; version="1.0.5"; sha256="1j5w93iliykfnpxl9kzh1rp6d3iy26ksj3j7yjl348yvplh0iyjl"; depends=[binom car iterators lme4 pbkrtest plotrix plyr RLRsim stringr]; }; simrec = derive2 { name="simrec"; version="1.0.0"; sha256="17zzbzgdisp5qh0vlbmkjf6a3axnpwj2kw03wymfbb3z557pbxlr"; depends=[]; }; - simrel = derive2 { name="simrel"; version="2.0.2"; sha256="192yp6njvq9l6yznjhf69da5z1vxl0q3398laimndwnvrpx73pcj"; depends=[FrF2 ggplot2 gridExtra jsonlite magrittr miniUI purrr reshape2 rlang rstudioapi scales sfsmisc shiny testthat tibble tidyr]; }; + sims = derive2 { name="sims"; version="0.0.2"; sha256="1vb04ndcvy8851kqirji0468jf8irx5z14nii1nyvh0hvrfb7wg9"; depends=[chk future_apply nlist yesno]; }; simsalapar = derive2 { name="simsalapar"; version="1.0-10"; sha256="1q7kh44xl7q48vpqbyrp85my6x97l4fqq36bry8vg3k5riihirzf"; depends=[colorspace gridBase sfsmisc]; }; - simsem = derive2 { name="simsem"; version="0.5-15"; sha256="183l6pysssxyhgw3s5gd0319snmvh439cy4xwfdjdwpavb8rrj06"; depends=[lavaan]; }; - simsl = derive2 { name="simsl"; version="0.1.0"; sha256="09d6k61c2m0n03xpqvig7310bpgddxl8vzfjgn6wbr21s73b9xis"; depends=[mgcv]; }; - simstandard = derive2 { name="simstandard"; version="0.6.0"; sha256="1kx7mxg2vc4g4grw5pg436haamj7kphqjaqhchrska9rfazqgmni"; depends=[lavaan magrittr mvtnorm purrr rlang tibble]; }; + simsem = derive2 { name="simsem"; version="0.5-16"; sha256="0scjb308pb8ivy5blbk1wj9d1yxcqknhvh95a3728crfq2xcqnh0"; depends=[lavaan]; }; + simsl = derive2 { name="simsl"; version="0.2.1"; sha256="12dc9lcy11g1yynycvcqm62npq0v13bg6fnykb5m9ijwga4x51il"; depends=[mgcv]; }; + simstandard = derive2 { name="simstandard"; version="0.6.2"; sha256="1473q4wdk6291nhsi384vwdvmbcis7x43dcsyh4fyzc0xz8zd8al"; depends=[lavaan magrittr mvtnorm purrr rlang tibble]; }; simstudy = derive2 { name="simstudy"; version="0.2.1"; sha256="0cczfby7l8s0kmb7jzn2bl67i55nwgc4h3vixg9gsfgds32pisfc"; depends=[backports data_table glue mvnfast mvtnorm Rcpp]; }; - simsurv = derive2 { name="simsurv"; version="0.2.3"; sha256="0jlacjgrnnlmcl6k83clfkdfb1kr2xbyz2zcmq1f3xg2z0zwypjq"; depends=[]; }; + simsurv = derive2 { name="simsurv"; version="1.0.0"; sha256="16b2a3br107hy2fc0vann9wf5h9kb5j76baa37g1sfc0h19kg6kr"; depends=[]; }; simtimer = derive2 { name="simtimer"; version="4.0.0"; sha256="1c5017xmh4767d75k4rs1pssyn7p5w41bcsjjmwk4c9g6w1jgx1w"; depends=[]; }; simts = derive2 { name="simts"; version="0.1.1"; sha256="1b76grf7c14pgyhphplnil4lkzbwn3dih4pv4xdy721ih9n9llby"; depends=[broom dplyr magrittr purrr Rcpp RcppArmadillo robcor scales tidyr]; }; simukde = derive2 { name="simukde"; version="1.2.0"; sha256="0rjxamspq1csa08blfmif3lknnrwfcpszwzijp465vz1107si8ac"; depends=[ks MASS mvtnorm]; }; @@ -14887,18 +15480,19 @@ in with self; { sinar = derive2 { name="sinar"; version="0.1.0"; sha256="0dywgqmvbrsygyvnln2mc5p6gaxvphr5byx7hkf0nkil54f2jzdf"; depends=[MASS numDeriv]; }; sindyr = derive2 { name="sindyr"; version="0.2.3"; sha256="0dk7zwj5hdr7fcxhdj9klml11sciyaj0v59dfgvnhhkxndwwdbrr"; depends=[arrangements crqa igraph matrixStats plot3D pracma]; }; sinew = derive2 { name="sinew"; version="0.3.8"; sha256="1ggx7wgmgnsv69nnc55mg9g7rzjv5m23sygz7x8q68pybmjr7fc1"; depends=[cli crayon miniUI rematch2 rstudioapi shiny sos stringi yaml]; }; - singcar = derive2 { name="singcar"; version="0.1.1"; sha256="0n3nv9v5nxb26a5idsdh7gyhy7yjw58ki2615d4j80nxx0a780bn"; depends=[CholWishart MASS withr]; }; - singleCellHaystack = derive2 { name="singleCellHaystack"; version="0.3.3"; sha256="0rfs7a3xy70zkqfijy2cyvn16i8kkh2djp48nh7ifr51dkmkgjg1"; depends=[ggplot2 Matrix reshape2]; }; + singcar = derive2 { name="singcar"; version="0.1.3"; sha256="17f80cqkgcyvmaavpqia9z54h3yf5as3v294fsc09l3zshzvbzg6"; depends=[CholWishart MASS withr]; }; + singleCellHaystack = derive2 { name="singleCellHaystack"; version="0.3.4"; sha256="08s31z15v4px3sfm2q2ips64qknahw04xhh6d5nmlsl65wbd143x"; depends=[ggplot2 Matrix reshape2]; }; sinib = derive2 { name="sinib"; version="1.0.0"; sha256="08x2a5hn41vcsai3r36w1kgzka4ks53pkp6dxn90bsqh40ydb0db"; depends=[]; }; siplab = derive2 { name="siplab"; version="1.5"; sha256="1gfncsqgwj7ljm7cik6kmcqynzppqlqlq1f9qpmvzfpf6fd1ccxp"; depends=[spatstat]; }; sirad = derive2 { name="sirad"; version="2.3-3"; sha256="0vhmk2fmq4797gj6c8803zw1ipmdxfvdfgi2bygzxbn5bqd4da2n"; depends=[raster zoo]; }; sirt = derive2 { name="sirt"; version="3.9-4"; sha256="1myj1dpmqzcyxhkyyvva3xwy1aq5d6l37zg9vhfnc3q4h1psc5hm"; depends=[CDM pbv Rcpp RcppArmadillo TAM]; }; - sirus = derive2 { name="sirus"; version="0.3.1"; sha256="1rh36f8pd9kzsp499895jfcsfnrnzp3187y40djd67r2b4ibkd78"; depends=[ggplot2 glmnet Matrix Rcpp RcppEigen ROCR]; }; + sirus = derive2 { name="sirus"; version="0.3.2"; sha256="1j821vxy81x12yv229k334s8cwjl5fla2wvlhdz01rf688sv0hbs"; depends=[ggplot2 glmnet Matrix Rcpp RcppEigen ROCR]; }; sisVIVE = derive2 { name="sisVIVE"; version="1.4"; sha256="1vh53irxgk8ahw52cdqbbm89dvmzyf54izg4lm8a3v92k5p6nzwz"; depends=[lars]; }; sisal = derive2 { name="sisal"; version="0.48"; sha256="1fh35ndra58dryw222ng7ys3gx1izyk5789k30lyd4n8wqy6sjjd"; depends=[boot digest lattice mgcv R_matlab R_methodsS3]; }; + sisireg = derive2 { name="sisireg"; version="0.9.1"; sha256="1vh2s25ksigqqqx5q0qjbn1226h7c4j1ky1121hf2m1n2j9pjqnm"; depends=[raster zoo]; }; sismonr = derive2 { name="sismonr"; version="2.1.0"; sha256="1v4vfz6zc4f70fay8r9vaxj62pcp8gqnh4aczbqpym9874330vi9"; depends=[dplyr ggplot2 ggpubr igraph jsonlite magrittr rlang scales stringr tictoc tidyr truncnorm XR XRJulia]; }; sistec = derive2 { name="sistec"; version="0.2.0"; sha256="0y43anin9vybiivf3jrxg19i9z4smmhhjvp52gci6icpn839kr8x"; depends=[dplyr openxlsx rlang shiny stringi stringr]; }; - sitar = derive2 { name="sitar"; version="1.1.2"; sha256="0njnsamb9mrds3rjlwwv6sn980jl744mdp0b9d36sqws7wgnxrfq"; depends=[dplyr glue nlme purrr rlang rsample tibble tidyr]; }; + sitar = derive2 { name="sitar"; version="1.2.0"; sha256="1dwj3xpi89i5pygw1rx38yi4spdis5bfivkjvwa1xnjcamw64ygg"; depends=[dplyr forcats ggplot2 glue magrittr nlme purrr rlang rsample tibble tidyr]; }; siteymlgen = derive2 { name="siteymlgen"; version="1.0.0"; sha256="1176fnf39ars5cdjvy5w2k6b92qv51hy86s71sl8ghr0lwdq9f59"; depends=[data_table dplyr lubridate magrittr purrr rlist rmarkdown stringr yaml ymlthis]; }; sitmo = derive2 { name="sitmo"; version="2.0.1"; sha256="0apdhwy3kxs39agsbvx5vn3xsgb22bf3jrwmr2cmqk9kmxbx740c"; depends=[Rcpp]; }; sitools = derive2 { name="sitools"; version="1.4"; sha256="0c0qnvsv06g6v7hxad96fkp9j641v8472mbphvaxa60k3xc7ackb"; depends=[]; }; @@ -14906,26 +15500,26 @@ in with self; { sitreeE = derive2 { name="sitreeE"; version="0.0-5"; sha256="16m8w0rxb40pimzd06znqskz74jk4rrki4gjy8nk24r1zih2cjq1"; depends=[data_table sitree]; }; sivs = derive2 { name="sivs"; version="0.2.4"; sha256="0qks0kgagahm4mgd7nd5qqwihrlivlc8q4dk4pcdjb7f15z073j8"; depends=[doParallel foreach glmnet pROC varhandle]; }; sizeMat = derive2 { name="sizeMat"; version="1.1.2"; sha256="1vbndadsn80ddrg471vp1qxf0gan38w6dkjk1p2npvfb47wdjj2h"; depends=[MASS matrixStats MCMCpack]; }; - sjPlot = derive2 { name="sjPlot"; version="2.8.6"; sha256="1dn9nvvp4jd45kwr4rpp2abf7xdpdmiv41rr3fkdb32a136bzx4b"; depends=[bayestestR dplyr effectsize ggeffects ggplot2 insight knitr MASS parameters performance purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; - sjdbc = derive2 { name="sjdbc"; version="1.6.0"; sha256="17ncgj2s2pjn3w3c1dgxv8g7y17h4p78iic86gsj2ahn0xpsmkcc"; depends=[rJava]; }; + sjPlot = derive2 { name="sjPlot"; version="2.8.7"; sha256="1g4qabg654kwdm09ihp4h3mg64a1d7a7gsn6w56rwsidqqaxilq0"; depends=[bayestestR dplyr effectsize ggeffects ggplot2 insight knitr MASS parameters performance purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; + sjdbc = derive2 { name="sjdbc"; version="1.6.1"; sha256="0cz5qc5lsipd3nlkzj8j03xmpzxp52c3q5av8pr7fm3vsdclawfk"; depends=[rJava]; }; sjlabelled = derive2 { name="sjlabelled"; version="1.1.7"; sha256="0d3fsjd2gxchv8mlx9l5pf8xvkmx4pgvizam83f3qss07bmvpzwg"; depends=[insight]; }; - sjmisc = derive2 { name="sjmisc"; version="2.8.5"; sha256="0xl0s56d13bia89ai619rcr0fzbvc2k8f7hjxik4qp0g4v87zzlk"; depends=[dplyr insight magrittr purrr rlang sjlabelled tidyselect]; }; - sjstats = derive2 { name="sjstats"; version="0.18.0"; sha256="17b1fcrhgjw66qa8zk2jj1bvz3vp5bnjn3p4y1wsg5ng5nxq8jz0"; depends=[bayestestR broom dplyr effectsize emmeans insight lme4 magrittr MASS modelr parameters performance purrr rlang sjlabelled sjmisc tidyr]; }; + sjmisc = derive2 { name="sjmisc"; version="2.8.6"; sha256="1nfrkv5jfnwb85blpv7yk7xac1myzi2c30bqcf7xicniknkjwycr"; depends=[dplyr insight magrittr purrr rlang sjlabelled tidyselect]; }; + sjstats = derive2 { name="sjstats"; version="0.18.1"; sha256="1cv80yjnyh6qihxf57zivihhia20gibr5f03x8aspy6382wnwlka"; depends=[bayestestR broom dplyr effectsize emmeans insight lme4 magrittr MASS modelr parameters performance purrr rlang sjlabelled sjmisc tidyr]; }; skda = derive2 { name="skda"; version="0.1"; sha256="0a6mksr1d0j3pd0kz4jb6yh466gvl4fkrvgvnlmvivpv6b2gqs3q"; depends=[]; }; skedastic = derive2 { name="skedastic"; version="1.0.1"; sha256="04s5cvv2zcdwmkv06w79va8aaxb0vx6c8bmz8sjpblvsrgc9c7nv"; depends=[arrangements bazar berryFunctions boot broom CompQuadForm cubature data_table dplyr expm gmp MASS mvtnorm pracma qpdf quantreg Rdpack Rmpfr]; }; skeletor = derive2 { name="skeletor"; version="1.0.4"; sha256="1jfbfbkjx8mdwamsrkhvcnyn470in702vgcyw3g2dbgs84gl29q8"; depends=[]; }; skellam = derive2 { name="skellam"; version="0.2.0"; sha256="0r5wbs5h7xc3k2vjxd4axwnxr9cmwm008fcyj1vyixkg8fa680gx"; depends=[]; }; sketch = derive2 { name="sketch"; version="1.0.3"; sha256="0d2kcf6q2xpvxzf0js8qbw0apkj8lbx1znzqcnidsgwn5p7ni20a"; depends=[base64enc glue htmltools jsonlite magrittr purrr rlang rstudioapi shiny]; }; sketcher = derive2 { name="sketcher"; version="0.1.3"; sha256="011lx15whrdj5q5h33h9brkzbn2fnpm1nx9ip1v9xl5xfkbj7952"; depends=[downloader dplyr imager jpeg magrittr png readbitmap stringr]; }; - skewlmm = derive2 { name="skewlmm"; version="0.2.2"; sha256="12lcim5k4q1g9n3nf1cyb1zyis2596jvwim286mifmwrxji0m20p"; depends=[dplyr ggplot2 moments mvtnorm nlme numDeriv purrr]; }; + skewlmm = derive2 { name="skewlmm"; version="0.2.3"; sha256="09ynpw603765qvxiy4qpsy7x0da6vavx1bk7cq4x4jzsbc8nh18i"; depends=[dplyr ggplot2 moments mvtnorm nlme numDeriv purrr]; }; skewt = derive2 { name="skewt"; version="0.1"; sha256="1xm00zfzjv53cq9drfcx7w2ri5dwsq7kajrk2hc1mvw0b6s4x2ix"; depends=[]; }; - skimr = derive2 { name="skimr"; version="2.1.2"; sha256="056cdf95hc1l19f5kjkyyxrnx6kl0lw0zzcin3xnblzbqvl0zrzh"; depends=[cli crayon dplyr knitr magrittr purrr repr rlang stringr tibble tidyr tidyselect withr]; }; + skimr = derive2 { name="skimr"; version="2.1.3"; sha256="02q5l1l1a9m602dg55gbb1zd3ymh0gxy6r815dj8cp769i8hqla1"; depends=[cli crayon dplyr knitr magrittr purrr repr rlang stringr tibble tidyr tidyselect vctrs withr]; }; sklarsomega = derive2 { name="sklarsomega"; version="2.0-1"; sha256="0pk3dk0bsbby4wnj8sad8yllix48hq3ayv3709kglc97d8bhjzha"; depends=[extraDistr hash LaplacesDemon Matrix mcmcse numDeriv spam]; }; skm = derive2 { name="skm"; version="0.1.5.4"; sha256="06g3bdncq2r56d8k3dr87gqnibypbsps0gj4jxkw9q1sq1yaff3v"; depends=[data_table magrittr plyr Rcpp RcppArmadillo RcppParallel]; }; skmeans = derive2 { name="skmeans"; version="0.2-13"; sha256="1nks9k910fc0m07wpi9ridpyvgnnjlgw821mnvpv8skr4i75zy1w"; depends=[clue cluster slam]; }; skpr = derive2 { name="skpr"; version="0.64.2"; sha256="07fchgv0aqgw0hvcav08zzfzqg8nbw8ibbpd3bd11jx1fikx4vyr"; depends=[base64enc car crayon doParallel doRNG foreach future iterators kableExtra knitr lazyeval lme4 lmerTest magrittr nlme promises Rcpp RcppEigen rintrojs shiny shinyjs shinythemes survival viridis]; }; skynet = derive2 { name="skynet"; version="1.4.0"; sha256="1ir8sw99fvdy8zp7ncgdnggr8hv1ph21kvdi9my42vlsh2fqi5ja"; depends=[data_table dplyr geosphere ggplot2 ggrepel httr igraph leaflet maps stringr]; }; - slackr = derive2 { name="slackr"; version="1.4.2"; sha256="1vm2h5fzcss3xx1annx68wrvv6c0s6h2ci0bipxmdl9amdaqw85w"; depends=[dplyr ggplot2 httr jsonlite]; }; + slackr = derive2 { name="slackr"; version="2.3.0"; sha256="09wskmg352rpj95l661qc78b9i1kcaj2hyp1pgd592ikpy5q2r9f"; depends=[cachem dplyr ggplot2 httr jsonlite magrittr memoise tibble xtable]; }; slam = derive2 { name="slam"; version="0.1-48"; sha256="1ppsvkph4v1dffxgp12a4wnr9arj7pkmh4qv0and3f6nbz9k42qa"; depends=[]; }; slanter = derive2 { name="slanter"; version="0.1-0"; sha256="161ldggjrd7sbp38fip92br5izcqbwfmxcmmg95dm13sviabxb7k"; depends=[Matrix pheatmap pracma]; }; sld = derive2 { name="sld"; version="0.3.3"; sha256="1ggvyx1nsfc1wwwzlqgvk6p5xxq6r6yx2rjv0290q7p06gc3i1ll"; depends=[lmom]; }; @@ -14933,9 +15527,10 @@ in with self; { sleepr = derive2 { name="sleepr"; version="0.3.0"; sha256="1ka4pl6a09d1qga5svcirc5ywmzz9pcml09053745lz3p1v8fnn3"; depends=[behavr data_table]; }; sleepwalk = derive2 { name="sleepwalk"; version="0.3.1"; sha256="1dr6iaiq5ixh7daih1qnaxn4jyqlqvk326lnmynhw7if4z1hj9r6"; depends=[cowplot ggplot2 httpuv jrc jsonlite scales]; }; slfm = derive2 { name="slfm"; version="1.0.1"; sha256="0s7fdvr4fvsb4789f9ly2x820g4xvabl04wk7k6i8pd5ckj2xjhy"; depends=[coda lattice Rcpp RcppArmadillo]; }; - slga = derive2 { name="slga"; version="1.1.1"; sha256="0l8jfqmpc51fq4xil03lvgxxyqv08a5m4drfvrihfd6f1jkv6xkf"; depends=[httr raster sf xml2]; }; + slga = derive2 { name="slga"; version="1.1.2"; sha256="1nw2jb6r7xb2z20kqa7fdcipn9a28q84hrr6j0bykd86s46fb9sz"; depends=[httr raster sf xml2]; }; + slgf = derive2 { name="slgf"; version="0.1.0"; sha256="0wjj9mbf33x5isi5h3mdas283aw9x2hi5hyqgqbi941vhwf6v31l"; depends=[numDeriv Rdpack]; }; slickR = derive2 { name="slickR"; version="0.5.0"; sha256="1zxj6ivdhi9wvqcrl0p8clwk8nxqmg1bijqamp0lhq82dpyrdngp"; depends=[base64enc htmltools htmlwidgets lifecycle xml2]; }; - slider = derive2 { name="slider"; version="0.1.5"; sha256="1x4jwfxam4czfkb1s5qds5krfw1h2p5a4rh6f5z4yvhsv0d81xck"; depends=[glue rlang vctrs warp]; }; + slider = derive2 { name="slider"; version="0.2.1"; sha256="1jijh8f3qcn8fa677sqvgl2fb4r5vca1cw4l2vbcqscxb2hr4bqw"; depends=[ellipsis glue rlang vctrs warp]; }; slideview = derive2 { name="slideview"; version="0.1.0"; sha256="0zq5s6qdxn6ri88pp0wf2kg2k4byrrsfvwh0ai892p4szqbc3w4v"; depends=[htmltools htmlwidgets lattice raster viridisLite]; }; slim = derive2 { name="slim"; version="0.1.1"; sha256="0x9bk6w6lmw15s85gw9g8d1wlb57kkvnmx1wsyasn93x9llkjva1"; depends=[data_table MASS]; }; slimrec = derive2 { name="slimrec"; version="0.1.0"; sha256="1qzcvk7z8y11hwmybvppk1gf8di596zxy7qs22fclp6h6y18s377"; depends=[assertthat bigmemory glmnet Matrix pbapply]; }; @@ -14949,38 +15544,39 @@ in with self; { slurmR = derive2 { name="slurmR"; version="0.4-1"; sha256="00ihaq2f86spl4ra41lyszrgn52vgpfw0bv0px23gc6qngxzxd6y"; depends=[]; }; sm = derive2 { name="sm"; version="2.2-5.6"; sha256="0c4whcx879gb4lwvqnzxl5n9xgpcqh2c54ip9ami3mwfprzcv45q"; depends=[]; }; smaa = derive2 { name="smaa"; version="0.3-0"; sha256="0y7j4q147fdk7fffyinc803mfzzsmcdfx8bp695w3wkq1wwy9kyl"; depends=[]; }; - smacof = derive2 { name="smacof"; version="2.1-1"; sha256="166acgllfwsdb28cjzb49f4b8gwcipqwzi9w45r4qmzyszf89xw3"; depends=[candisc colorspace doParallel e1071 ellipse foreach Hmisc MASS nnls plotrix polynom weights wordcloud]; }; - smacpod = derive2 { name="smacpod"; version="2.1"; sha256="1fi8v69xkm182nyaryz83kw55cdgv99cqglphlw82n4k7w0lfrk3"; depends=[abind pbapply plotrix sp spatstat]; }; + smacof = derive2 { name="smacof"; version="2.1-2"; sha256="1vhlqg4shxgrvjicxn4yljbc34b4rz2m7ndhcr8pn1xhy2mqakp2"; depends=[candisc colorspace doParallel e1071 ellipse foreach Hmisc MASS nnls plotrix polynom weights wordcloud]; }; + smacpod = derive2 { name="smacpod"; version="2.1.1"; sha256="0mc8g0c3gl4a3bjd9qpgi4mrq28ky2c8hcl4qd192b21rbkj218y"; depends=[abind pbapply plotrix sp spatstat spatstat_core spatstat_geom]; }; smallarea = derive2 { name="smallarea"; version="0.1"; sha256="0jcv0xbh8v4g6zxxs4yyd0divwzk9d2w7g01r4s65khxvy3av7yx"; depends=[MASS]; }; smam = derive2 { name="smam"; version="0.5.4"; sha256="0v7wd1jkacfzjcg4g44dl1d7qxn6as6vicsyafkmrczgdzmrx1md"; depends=[doParallel doSNOW EnvStats foreach Matrix nloptr numDeriv Rcpp RcppGSL RcppParallel]; }; smapr = derive2 { name="smapr"; version="0.2.1"; sha256="1gcq66gs6968c5h303dqd2jyw2rcdwxv642ki1cmpdj6ix665dpr"; depends=[httr rappdirs raster rhdf5 rvest xml2]; }; smartR = derive2 { name="smartR"; version="0.62.3"; sha256="0ardb4arhr7qmr30b3ahf7hkwlys9i420bm8h2688phahgfkk0y8"; depends=[caret chron cluster foreign ggplot2 ggrepel ggthemes gridExtra gstat gsubfn gWidgets2 gWidgets2RGtk2 igraph jpeg jsonlite lattice mapdata mapproj maps maptools marmap mtsdi nnls PBSmapping plyr R6 RColorBrewer reshape2 rgdal rgeos rjags ROCR rpart scales shape sp spdep sqldf vegan]; }; - smartdata = derive2 { name="smartdata"; version="1.0.3"; sha256="06hqpsr68dqm5544965g648267kkixf44bh0g5x6ik66vj6crkfm"; depends=[adaptiveGPCA Amelia Boruta checkmate class clusterSim denoiseR discretization DMwR FSelector functional imbalance infotheo lle magrittr mice missForest missMDA MVN NoiseFiltersR outliers RoughSets unbalanced VIM]; }; smartmap = derive2 { name="smartmap"; version="0.1.1"; sha256="0pxbjkkknng7xa8ihba69n1a2w9052fsbb0w8fq1y1qrqmmibwdi"; depends=[leaflet magrittr sf]; }; - smartsizer = derive2 { name="smartsizer"; version="1.0.2"; sha256="1w2vf6q3f7bywkvazgxn9gh7f2bqy4rg74mm4r6izw4gx7r81ls6"; depends=[MASS]; }; + smartsizer = derive2 { name="smartsizer"; version="1.0.3"; sha256="1jfhba8p5flz4v0m770kb3p2gw4vgzpxqb0ngl9fhw30jzkx6nwd"; depends=[MASS]; }; + smartsnp = derive2 { name="smartsnp"; version="1.1.0"; sha256="1gzzhys6bja55iclkji254kri6r3iamiw7bv881mp615wi9r3hx2"; depends=[bootSVD data_table foreach Rcpp RcppArmadillo Rfast RSpectra vegan vroom]; }; smatr = derive2 { name="smatr"; version="3.4-8"; sha256="0qqqbg65flxh48sw7x90zvgzbpcfzb1811h0pz3zlhdw9a7khs9n"; depends=[]; }; smbinning = derive2 { name="smbinning"; version="0.9"; sha256="1sr0nsqqzxdf402g9qx1ycigbh330idl9n2cyli4x4zxj1nqm3yv"; depends=[Formula gsubfn partykit sqldf]; }; - smcfcs = derive2 { name="smcfcs"; version="1.4.2"; sha256="1gr10jy6a5d4zlprrxl5102814746vhzb3q6v13f40dyfxkljdfl"; depends=[MASS rlang survival VGAM]; }; + smcfcs = derive2 { name="smcfcs"; version="1.5.0"; sha256="03qawdzh8dyg249pw3vqja5g5f26zf4m2ys61cqx6jnyb34aks34"; depends=[MASS rlang survival VGAM]; }; smco = derive2 { name="smco"; version="0.1"; sha256="1sj3y1x6pc32cwzyhn9gaxs964xh5xl4vw08hsa8kfcxhh2r0s99"; depends=[]; }; smcure = derive2 { name="smcure"; version="2.0"; sha256="1j7fxnb0sx57a0l929c3haz4f1y829ymlq0cvdh0cia4qp6ydv60"; depends=[survival]; }; smd = derive2 { name="smd"; version="0.6.6"; sha256="1nvlka2prqh1hcj4ngpj2c2gmfryziijqwjyfy9fmq78skiq0jij"; depends=[MASS]; }; smdata = derive2 { name="smdata"; version="1.2"; sha256="1p26b46kg4hmhs2fl9h9vchar00llqv58ylx438bjgzz4f229qvr"; depends=[]; }; smds = derive2 { name="smds"; version="1.0"; sha256="0aqf3wfn6mlsl8a32gaf9qdpyxwsx19g6mma8qzgaysdmk6vhbpd"; depends=[MASS]; }; - smerc = derive2 { name="smerc"; version="1.3.3"; sha256="1nzql8dv817ll86ba9798pw2fndx9zvcsxxixh85c7gzyfj72m9b"; depends=[pbapply randtoolbox Rcpp RcppProgress sp]; }; + smerc = derive2 { name="smerc"; version="1.4.2"; sha256="1sd3j8jlz31r62hmvmhq1lz8qvp6kmgkmimjnkimyl2mfcpdfa23"; depends=[MESS pbapply randtoolbox Rcpp RcppProgress sp]; }; smfishHmrf = derive2 { name="smfishHmrf"; version="0.1"; sha256="1k6mpyp11zv5rc3k98baymr903p2pf424nf9xng20q1li8s8y2ab"; depends=[fs pracma Rdpack]; }; smfsb = derive2 { name="smfsb"; version="1.3"; sha256="1328w7zpwd3nam6ha4bh14g919jjl87v323ijmbp1j71gc64nn2i"; depends=[abind]; }; - smicd = derive2 { name="smicd"; version="1.1.1"; sha256="187ydw50py67ha0z3xyk9hk988gszd8jfzkgsv4hjlbx80fzb2nv"; depends=[formula_tools Hmisc ineq laeken lme4 MuMIn mvtnorm truncnorm weights]; }; + smicd = derive2 { name="smicd"; version="1.1.2"; sha256="1v80sshsp3qlc1y7yz1pl4s2jk6khdsli3z2v0cjxfsv1izfd02x"; depends=[formula_tools Hmisc ineq laeken lme4 MuMIn mvtnorm truncnorm weights]; }; smirnov = derive2 { name="smirnov"; version="1.0-1"; sha256="09mpb45wj8rfi6n6822h4c335xp2pl0xsyxgin1bkfw97yjcvrgk"; depends=[]; }; + smmR = derive2 { name="smmR"; version="1.0.2"; sha256="1aw9vf0vkjka3000gqd1nzx7gq8s5w95rah85w958wrg71w85byf"; depends=[DiscreteWeibull Rcpp RcppArmadillo seqinr]; }; smnet = derive2 { name="smnet"; version="2.1.2"; sha256="17zv02f1g86s55g81anhqrxfgy2biamsw606byxwh9kdc5l4vfv6"; depends=[RSQLite spam SSN]; }; smog = derive2 { name="smog"; version="2.1.0"; sha256="1mnnvp6crjwwiym16q4hmn9zwna1gblwqjlan4x9zyvgp1j70k26"; depends=[doParallel dplyr foreach ggplot2 magrittr Rcpp RcppArmadillo Rdpack rmarkdown tidyr]; }; smoke = derive2 { name="smoke"; version="2.0.0"; sha256="1jdl5swg66vqryd40rrqpsnkczmsiaf5x6vlfv774vbnrc6q2v2g"; depends=[Rdpack]; }; smoof = derive2 { name="smoof"; version="1.6.0.2"; sha256="14zwrsyhbrwggwiaq8vxps8cgkp6glb14b2cp2ph1ppa0abvlbfq"; depends=[BBmisc checkmate ggplot2 mco ParamHelpers plot3D plotly RColorBrewer Rcpp RcppArmadillo RJSONIO]; }; - smooth = derive2 { name="smooth"; version="3.0.0"; sha256="0gqmg0w2165fm0476lj0n1d9sb5p0f56v379vzj55s9313a94gf4"; depends=[forecast greybox MASS nloptr pracma Rcpp RcppArmadillo statmod zoo]; }; + smooth = derive2 { name="smooth"; version="3.1.1"; sha256="0iiqr39c023g2vjqqrykwhl3byhjf2qig3slxhrdd5vvmcqpnqxh"; depends=[greybox MASS nloptr pracma Rcpp RcppArmadillo statmod zoo]; }; smoothAPC = derive2 { name="smoothAPC"; version="0.3"; sha256="11f34qqdm8m0hmy9jf29q439slchvmqgdfrmak7vcdhfnjcylr5r"; depends=[colorspace lmtest quantreg rgl SparseM]; }; smoothHR = derive2 { name="smoothHR"; version="1.0.2"; sha256="0l33xg3p9pyfrp4rhavz8m1jakk4wr8i14g6jjiizb03rpxdpzqy"; depends=[survival]; }; smoothROCtime = derive2 { name="smoothROCtime"; version="0.1.0"; sha256="03iihjxb5xdaf74cm9cajqqjli754mdmv5v1y4hla9vv23017ca1"; depends=[ks]; }; smoothSurv = derive2 { name="smoothSurv"; version="2.3"; sha256="0rxgps184hl49g8gpa7hjvdl2i01qkghmvlv8blwwr9rfk19aq1s"; depends=[survival]; }; - smoothedLasso = derive2 { name="smoothedLasso"; version="1.5"; sha256="13g55axzicfl7plhaax1vj1x57pfasyzzrw968rm305mmpavhzx9"; depends=[Matrix Rdpack]; }; + smoothedLasso = derive2 { name="smoothedLasso"; version="1.6"; sha256="0007i40a12jgavgd95fbpiil1s331qd05ww6v19l49lbnlk3ldxg"; depends=[Matrix Rdpack]; }; smoother = derive2 { name="smoother"; version="1.1"; sha256="0nqr1bvlr5bnasqg74zmknjjl4x28kla9h5cxpga3kq5z215pdci"; depends=[TTR]; }; smoothie = derive2 { name="smoothie"; version="1.0-1"; sha256="12p4ig8fbmlsby5jjd3d27njv8j7aiwx0m2n1nmgvjj0n330s1kj"; depends=[]; }; smoothmest = derive2 { name="smoothmest"; version="0.1-2"; sha256="14cri1b6ha8w4h8m26b3d7qip211wfv1sywgdxw3a6vqgc65hmk5"; depends=[MASS]; }; @@ -14992,8 +15588,8 @@ in with self; { smpic = derive2 { name="smpic"; version="0.1.0"; sha256="0ff2146gjcrc6nvrbf4779jh076abhb843zzlk2zvqir13qfap61"; depends=[ggplot2 imager stringr]; }; sms = derive2 { name="sms"; version="2.3.1"; sha256="0vr5jy8bxbczaqr9kg0fnanxhv9nj51yzgacrb63k33cs85p981m"; depends=[doParallel foreach iterators]; }; smss = derive2 { name="smss"; version="1.0-2"; sha256="04lgfdcvnzpnpplyl62fy7slyiy8wkqpjjrzmclgqis3c9zkkncp"; depends=[]; }; - smurf = derive2 { name="smurf"; version="1.0.7"; sha256="16iy9cs2ng16lwprbff67lw099qwlrh65hvsxbl67d5wbg43wg2l"; depends=[catdata glmnet MASS Matrix mgcv RColorBrewer Rcpp RcppArmadillo speedglm]; }; - sn = derive2 { name="sn"; version="1.6-2"; sha256="179xb7yb8br99aa5awm2yxsy0v5w1kdhv6a7ifaliz2y64677m1g"; depends=[mnormt numDeriv quantreg]; }; + smurf = derive2 { name="smurf"; version="1.1.2"; sha256="00q54pg42anilhcshhjvv277mkszbpzpkf1g7srs7cjd5skjvsaf"; depends=[catdata glmnet MASS Matrix mgcv RColorBrewer Rcpp RcppArmadillo speedglm]; }; + sn = derive2 { name="sn"; version="2.0.0"; sha256="0sl8qzy9isy5fq8qxh1fg5285jzgy895nbgz8gdq5d0r6zdwrmmb"; depends=[mnormt numDeriv quantreg]; }; sna = derive2 { name="sna"; version="2.6"; sha256="0ai0v4538d30m4wks5s3lch1yfmx1ml0nnrz7ihs097lv586a09s"; depends=[network statnet_common]; }; snahelper = derive2 { name="snahelper"; version="1.2.0"; sha256="0pr4lb4606icxdvsraf5bcpaicwp1fvng9d5rymkwqizg4k5xqlk"; depends=[colourpicker DT formatR ggplot2 ggraph graphlayouts igraph miniUI rstudioapi shiny]; }; snakecase = derive2 { name="snakecase"; version="0.11.0"; sha256="1ky1x2cp5rd0ffd9m1fji9sq4z4jsrpxzg30brw8bb4ihfjj114r"; depends=[stringi stringr]; }; @@ -15016,6 +15612,7 @@ in with self; { snpStatsWriter = derive2 { name="snpStatsWriter"; version="1.5-6"; sha256="04qhng888yih8gc7yd6rrxvvqf98x3c2xxz22gkwqx59waqd4jlq"; depends=[colorspace snpStats]; }; snpar = derive2 { name="snpar"; version="1.0"; sha256="0c9myg748jm7khqs8yhg2glxgar1wcf6gyg0xwbmw0qc41myzfnq"; depends=[]; }; snplist = derive2 { name="snplist"; version="0.18.1"; sha256="14x31h8h3lx25rm30vhp89byrzy3qrmawi07pmzy4xpxdf0rxm4s"; depends=[biomaRt DBI R_utils Rcpp RSQLite]; }; + snpsettest = derive2 { name="snpsettest"; version="0.1.0"; sha256="0cik8vjyx0a7x9vvxl03lpcpdjqczdfbrlygr5rkpgi6lfijxc9r"; depends=[data_table gaston Rcpp RcppArmadillo]; }; sns = derive2 { name="sns"; version="1.1.2"; sha256="132zd57xb2y0nshw4lakf49r2mvvkv7j32f7l7hqrh91mw7wyqpr"; depends=[coda mvtnorm numDeriv]; }; sobir = derive2 { name="sobir"; version="0.1.2"; sha256="0di9mk1c1jf8yr7jpmfm19w2w3p9lz1mkgrv3bmfyab83aghvbfp"; depends=[DescTools devtools dplyr ggplot2 raster rlang scales sp statmod stringr tidyr usethis]; }; sobolnp = derive2 { name="sobolnp"; version="0.1.0"; sha256="00rmigjyd3fsmhrhbvjzrfsl4ir0xpfr4xbgjws6vkx2rmcqnq1s"; depends=[minqa np pbmcapply]; }; @@ -15023,14 +15620,14 @@ in with self; { socceR = derive2 { name="socceR"; version="0.1.1"; sha256="1vd0r3vixavg1br2q3kfn3nvl7dw854vkcfwcvyw411k84ivb13y"; depends=[Rcpp]; }; social = derive2 { name="social"; version="1.0"; sha256="0ny81bhj80rlwwa6cgbkdz2rxz6bp0f3nvjr1sqxr4s8l8rnf4ic"; depends=[Rcpp]; }; socialmixr = derive2 { name="socialmixr"; version="0.1.8"; sha256="0zhinhjv1ablhdyz41a1ii1s3mzqg8f2ns7xcjnlwa9fx364x5a2"; depends=[countrycode curl data_table httr jsonlite lubridate oai stringr wpp2015 XML]; }; - sociome = derive2 { name="sociome"; version="1.4.2"; sha256="14kcly2lningjpzf04xi59fb9nb7cahhbplqndsb34rzwbifa534"; depends=[censusapi dplyr magrittr mice psych purrr rlang stringr tidycensus tidyr]; }; + sociome = derive2 { name="sociome"; version="2.0.0"; sha256="1r49v4ajjv2v10478bmbjv3hnyzi9srw6q04x4gl0fnqch45hn6p"; depends=[censusapi dplyr magrittr mice psych purrr rlang stringr tidycensus tidyr]; }; socviz = derive2 { name="socviz"; version="1.2"; sha256="1294xwy26vshmaiw3pkx3f90j8g6fv64gygv88b7lnz6fhai1nq5"; depends=[dplyr fs magrittr rlang tibble]; }; sodavis = derive2 { name="sodavis"; version="1.2"; sha256="1jf5sml51qxlpgv5b1rvyig4dm4ijw2hpnk85zf790jp22xm64jw"; depends=[MASS mvtnorm nnet]; }; sodium = derive2 { name="sodium"; version="1.1"; sha256="1zxzi8xvxnhgcd5qrylf08nz1cdq3aslrswjas440qg63ypmbf6w"; depends=[]; }; sofa = derive2 { name="sofa"; version="0.4.0"; sha256="1w78f8pnx4vh6znpwwcy9k4j795zji4bv88mi6ihdv09ar7if7yv"; depends=[crul jsonlite mime R6]; }; softImpute = derive2 { name="softImpute"; version="1.4"; sha256="07cxbzkl08q58m1455i139952rmryjlic4s2f2hscl5zxxmfdxcq"; depends=[Matrix]; }; softclassval = derive2 { name="softclassval"; version="1.0-20160527"; sha256="1f5qj5sajy3dg0mgss6f9w6v5a2prcypld9jcv457bd4n4a409kr"; depends=[arrayhelpers svUnit]; }; - soilDB = derive2 { name="soilDB"; version="2.5.8"; sha256="18kshc39rzh0lkmhhc062ww5pmi0wnr563647igvvk9bv2zrm8qy"; depends=[aqp curl data_table lattice plyr raster reshape2 sp xml2]; }; + soilDB = derive2 { name="soilDB"; version="2.6.1"; sha256="0v9zyjj75cnv5vh1pvsm8i0si1idy4q3kl6vdm6fyk0pyzwgirm7"; depends=[aqp curl data_table DBI plyr raster reshape2 sp xml2]; }; soilassessment = derive2 { name="soilassessment"; version="0.2.1"; sha256="14hqwxpqb19g5r7abar40kprfilzxi24mg083gypvxzs48pb6gn8"; depends=[arm caret Cubist deSolve e1071 FuzzyAHP Hmisc kernlab maptools nnet qrnn quantregForest randomForest ranger raster rgdal rpart soiltexture sp]; }; soilcarbon = derive2 { name="soilcarbon"; version="1.2.0"; sha256="1gxq7np5xh3jcqbsf8xva4b82rv6rab2j23mbkc4pjs6nbnzvzba"; depends=[devtools ggplot2 openxlsx shiny]; }; soilphysics = derive2 { name="soilphysics"; version="4.0"; sha256="0b4fkc1plmafjdlad7s4pvca6lafmrswwpfddvsh73734s7cslmq"; depends=[boot fields MASS shiny shinydashboard]; }; @@ -15039,22 +15636,22 @@ in with self; { sokoban = derive2 { name="sokoban"; version="0.1.0"; sha256="07r2zv9rynvw06fpncrz3rsmkdy6z2pcvmm559bhs428kmnq2xib"; depends=[]; }; solaR = derive2 { name="solaR"; version="0.45"; sha256="1vxpwaizjxy27r54anhf48pf97lm4ck750m0p4kmh716irmhp319"; depends=[lattice latticeExtra RColorBrewer zoo]; }; solarPos = derive2 { name="solarPos"; version="1.0"; sha256="0004da7vqpq14q5lhs8vyvjl99j8gzxd5wrlw5d1vwfns3ica0q5"; depends=[]; }; - solartime = derive2 { name="solartime"; version="0.0.1"; sha256="0q6la6d281zgf1kxhrdvi3b91na60szknq0fvldvlnszlqb5vkgs"; depends=[lubridate]; }; + solartime = derive2 { name="solartime"; version="0.0.2"; sha256="1lg7sc3vxsqqiq6a3qsl14gcc1fdi15h1mqcfjmq2j5xna6s5msx"; depends=[lubridate]; }; solitude = derive2 { name="solitude"; version="1.1.1"; sha256="0cd3ppkydpak5sx49fd7wh1ha5lhphy51hfnsl480d88fx8cc6vf"; depends=[data_table future_apply igraph lgr R6 ranger]; }; solrad = derive2 { name="solrad"; version="1.0.0"; sha256="13ybllvmig1yqsy4md4kazs83hxb9lrlwy64yw1wwr1w6sxpbnp6"; depends=[]; }; solrium = derive2 { name="solrium"; version="1.1.4"; sha256="0x83s83r4sr4r9cgk9fgcw6xz778m4gg14fzwib3qja6ax2xpk2z"; depends=[crul dplyr jsonlite plyr R6 tibble xml2]; }; - solvebio = derive2 { name="solvebio"; version="2.9.0"; sha256="0wl5xffgw2gy3496wvkg0pvy4apd43p9bw7gv4bjrflc4m0fh10q"; depends=[dplyr httr jsonlite mime]; }; + solvebio = derive2 { name="solvebio"; version="2.10.1"; sha256="0f3jh56wyvm8s47r879xq1ry0bikayq9x79lc2zzkmcyz5s0k2c4"; depends=[dplyr httr jsonlite mime]; }; som = derive2 { name="som"; version="0.3-5.1"; sha256="1fbza1jxvwrkf5x3inkj36vshhkn7mz0ajqlxalbfmk6ngjw1x56"; depends=[]; }; som_nn = derive2 { name="som.nn"; version="1.1.0"; sha256="0mw2c2lqvdq9bhndpjyawjy43l4x7clcsx2350j45g7fnchhy602"; depends=[class hexbin kohonen som]; }; soma = derive2 { name="soma"; version="1.1.1"; sha256="1mc1yr9sq9h2z60v40aqmil0xswj5hgxfdh4racq297qw3a97my4"; depends=[reportr]; }; someKfwer = derive2 { name="someKfwer"; version="1.2"; sha256="0widny5l04ja91fy16x4giwrabwqhx0fs3yl48pv9xh4zj6sx563"; depends=[]; }; - someMTP = derive2 { name="someMTP"; version="1.4.1"; sha256="19bsn8rny1vv9343bvk8xzhh82sskl0zg0f5r59g9k812q5llchn"; depends=[]; }; + someMTP = derive2 { name="someMTP"; version="1.4.1.1"; sha256="197ajnnp92qh807a55z0i9z8nw0vmf5vvr216nxjwa2l9kw8c84k"; depends=[]; }; somebm = derive2 { name="somebm"; version="0.1"; sha256="1iwwc94k6znh4d3bbjnvwp4chc4wg0iy4v2f99cs4jasrsimb4p8"; depends=[]; }; - sommer = derive2 { name="sommer"; version="4.1.1"; sha256="029kkry7sfmzi6dqql297815x7vyh3zxswn50zypsbkn4ki3bnfy"; depends=[crayon lattice MASS Matrix Rcpp RcppArmadillo]; }; + sommer = derive2 { name="sommer"; version="4.1.3"; sha256="0cm27niyw095v0dq5j9jbk704rld74dh37hwnqs3k4x6gjklpvmc"; depends=[crayon lattice MASS Matrix Rcpp RcppArmadillo RcppProgress]; }; somplot = derive2 { name="somplot"; version="1.6.4"; sha256="06c8p2lqz3yxmxdl7ji8a3czvxnsbl7bwyiig76pkwc3a5qqfbb9"; depends=[hexbin]; }; sonar = derive2 { name="sonar"; version="1.0.2"; sha256="1f0f5iqi3y9vnxyym14nm8dqxw0vcpnxmvvkx4sm612i4fclg1f9"; depends=[]; }; sonicLength = derive2 { name="sonicLength"; version="1.4.6"; sha256="0jh9zk908afqxacccsph6477cc8sbcc1vxbv7jz8ppgc20imw932"; depends=[]; }; - sonicscrewdriver = derive2 { name="sonicscrewdriver"; version="0.0.3"; sha256="1rdmpy0b3yng63r1nd0kgs75r8xf6f55prlzix9dhis8q1p0y6q1"; depends=[ggplot2 jsonlite seewave tuneR]; }; + sonicscrewdriver = derive2 { name="sonicscrewdriver"; version="0.0.4"; sha256="0myn1arwswinhjksz0ijq8242f4c5l5phz2m6brd83avcpf707g6"; depends=[ggplot2 hms jsonlite mime seewave suncalc tuneR]; }; sonify = derive2 { name="sonify"; version="0.0-1"; sha256="1wkqqgf8fhhaz1dmri2zzr8cdwmx3cgrxbprrz3yily5r1m17d15"; depends=[tuneR]; }; soobench = derive2 { name="soobench"; version="1.9.18"; sha256="06wzlxdw0l6jc1zqsgkn120ibprfalwqd38xh7dpi30vdqiqskcc"; depends=[]; }; soptdmaeA = derive2 { name="soptdmaeA"; version="1.0.0"; sha256="03n1y82myq0rz14awjnx9nx1dz3dxqq58m13cw7a7ncap7fmw9r5"; depends=[igraph MASS Matrix]; }; @@ -15063,22 +15660,23 @@ in with self; { sortable = derive2 { name="sortable"; version="0.4.4"; sha256="15wn8xnvzawqxb97dlzd5v2qrxxizply6ah2ry0h6wrywdz2xppl"; depends=[assertthat ellipsis htmltools htmlwidgets jsonlite learnr shiny]; }; sorvi = derive2 { name="sorvi"; version="0.7.26"; sha256="19lfrc4bdiljs437w3a2bpf7abnkv0934dh929bbj2w1w8rzghjn"; depends=[dplyr ggplot2 RColorBrewer reshape2]; }; sos = derive2 { name="sos"; version="2.0-2"; sha256="0x8hs950s05ydh7vjjbpzfj1if01h1z9dz32xszik6fz94na279l"; depends=[brew]; }; - sotkanet = derive2 { name="sotkanet"; version="0.9.48"; sha256="1jw9agj92zzgad5kk9z6smjacimwinci6aaqlzmshivb8g8rv8zp"; depends=[RCurl rjson]; }; + sotkanet = derive2 { name="sotkanet"; version="0.9.76"; sha256="1lha5nicfxpkfaayrswnpipbc08s9blbml65fr5iasvmxhfrfadz"; depends=[rjson]; }; sotu = derive2 { name="sotu"; version="1.0.2"; sha256="0aqwkawaydsm91hz13msjg1a5llg7xmv6hxmfmsaganrl7iaym3c"; depends=[]; }; sound = derive2 { name="sound"; version="1.4.5"; sha256="1kbbb614d0fmj9l0yjiwf5yqnl7sby4xklp7qwp6rwjvq9bnm0ab"; depends=[]; }; soundcorrs = derive2 { name="soundcorrs"; version="0.4.0"; sha256="1azvsv3bghlab8q24wbb6xwd5a4cydx1cagvhk8h0h5ib9957zab"; depends=[]; }; soundecology = derive2 { name="soundecology"; version="1.3.3"; sha256="16h6gbdlyav7wbfisdv1f2zsqhr45liidgj7qqk8giwjxgan8q97"; depends=[ineq oce pracma seewave tuneR vegan]; }; - soundgen = derive2 { name="soundgen"; version="1.8.2"; sha256="0ivx7039276x6nzpavynw4yr914r0cz1qsiqihfwm80pkpw6760q"; depends=[dtw mvtnorm phonTools reshape2 seewave shiny shinyBS shinyjs tuneR zoo]; }; + soundgen = derive2 { name="soundgen"; version="2.0.0"; sha256="0m34avcy0zc4xf406jg9wa79vjpl8s5bdn865mh77pb7vy9crx1a"; depends=[dtw mvtnorm phonTools reshape2 seewave shiny shinyBS shinyjs signal tuneR zoo]; }; source_gist = derive2 { name="source.gist"; version="1.0.0"; sha256="03bv0l4ccz9p41cjw18wlz081vbjxzfgq3imlhq3pgy9jdwcd8fp"; depends=[RCurl rjson]; }; sourceR = derive2 { name="sourceR"; version="1.1.0"; sha256="09mikl6rkigx2bdnwqsgxwksz40lspq27hsrhlnfyz5yhs31ssda"; depends=[assertthat cluster dplyr gplots gtools R6 Rcpp reshape2 SPIn tensorA]; }; sourcetools = derive2 { name="sourcetools"; version="0.1.7"; sha256="1jnjir0q2dj724f1mjm6p5h77yzyx6xcqy9r2g7gmcxkxw349627"; depends=[]; }; - sp = derive2 { name="sp"; version="1.4-4"; sha256="0zzw1gfic5b311vrbkmmmaap3yllgd192af067l5ymm885jqm1zs"; depends=[lattice]; }; + sovereign = derive2 { name="sovereign"; version="1.0.0"; sha256="05klxfipakdwdsdqnfglj4jicryxsy6h0h1c2rlnc4f5m72lvwzd"; depends=[broom dplyr ggplot2 gridExtra lmtest lubridate magrittr mclust purrr randomForest sandwich stringr strucchange tidyr xts zoo]; }; + sp = derive2 { name="sp"; version="1.4-5"; sha256="1nh9izsnszzm5kbq461w8bi0yh7fqzb74b2zmpg5qis0slbb5vkb"; depends=[lattice]; }; sp23design = derive2 { name="sp23design"; version="0.9"; sha256="1ihvcld19cxflq2h93m9k9yaidhwixvbn46fqqc1p3wxzplmh8bs"; depends=[mvtnorm survival]; }; spANOVA = derive2 { name="spANOVA"; version="0.99.2"; sha256="0dlx9wwccq67g4yni3gbrv43f5pgm3mg715q2v8f09r1akhfg5by"; depends=[ape car DT geoR gtools knitr MASS Matrix multcomp multcompView mvtnorm rmarkdown ScottKnott shiny shinyBS shinycssloaders shinythemes spatialreg spdep xtable]; }; spAddins = derive2 { name="spAddins"; version="0.2.0"; sha256="19wbcghcf0f9qvqy92jhsdcpmd9b4lkhxndvr71cyhzga539lh1n"; depends=[magrittr purrr rstudioapi stringr]; }; - spBFA = derive2 { name="spBFA"; version="1.0"; sha256="0w50zzizh8ki0ngwjaj92g0lcj79ssllv75a1b4i37hiy4qh4z1m"; depends=[msm mvtnorm pgdraw Rcpp RcppArmadillo]; }; + spBFA = derive2 { name="spBFA"; version="1.1"; sha256="1jx1w9ipf8q08vx1w80s4h7nvgl2xqwcj7afci3j78psc6bigazi"; depends=[msm mvtnorm pgdraw Rcpp RcppArmadillo]; }; spBayes = derive2 { name="spBayes"; version="0.4-3"; sha256="0hllm70dly1niigp9r5645as97phlkba46dp9brcr34080m6w1w9"; depends=[coda Formula magic Matrix sp]; }; - spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.4"; sha256="0mf5ql9a45dkq0dw1l0h03gcnhm6if10faj72jrhgrlcrgzzdfyn"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; + spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.5"; sha256="175n7va1rlnwhjscfj5zvs93b0cx4gmn299pa9cbax71xxjx6l2s"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; spCP = derive2 { name="spCP"; version="1.2"; sha256="0y00k96p96jgp84wbdhqfwsq2fg8c68gc5310rnzpiv3clws27fb"; depends=[msm mvtnorm Rcpp RcppArmadillo]; }; spData = derive2 { name="spData"; version="0.3.8"; sha256="1mlsqy9cbilfc80cbdlbgsngvzdkrd9yjdkxnw2b1gzxnj6jcqbs"; depends=[raster sp]; }; spDates = derive2 { name="spDates"; version="1.0"; sha256="0bf9bwi26h26ms0lczk1dld3cwgnx49y6g56sqwrkagn7w6blsrn"; depends=[data_table dplyr gdistance ggplot2 gstat magrittr raster rcarbon rlang smatr sp viridisLite]; }; @@ -15086,128 +15684,136 @@ in with self; { spGARCH = derive2 { name="spGARCH"; version="0.2.2"; sha256="1wrmk2ybgysvibfy8vvp7pyqda5apqp0jxjfp3hlb416fza52966"; depends=[Matrix nleqslv Rcpp RcppEigen Rsolnp spdep truncnorm]; }; spMC = derive2 { name="spMC"; version="0.3.10"; sha256="0p0s6w7sif02b91b73a0zb2i4i95a8m86dkqmgx6w1jk9h2mgqaz"; depends=[]; }; spMaps = derive2 { name="spMaps"; version="0.4.0"; sha256="0n9693aam7gsclfhijq7cy61l0w4mm5vf3rjaz5w0jrz77lrkprh"; depends=[raster rgeos sp]; }; - spNNGP = derive2 { name="spNNGP"; version="0.1.4"; sha256="14mz5cgxm9ka7q7f7qs80hqrgbk2mjphyc28ih73lkhcknl2v1lp"; depends=[coda Formula RANN]; }; + spNNGP = derive2 { name="spNNGP"; version="0.1.5"; sha256="0mb6aw96p8kwh58lalg8zkm696nrks04irw253m6jr7nf00k4jgp"; depends=[coda Formula RANN]; }; + spNetwork = derive2 { name="spNetwork"; version="0.1.1"; sha256="1dyfsi9q5c7vsdisna4bwm6gqvkq133wl9q227jsh4x429mc0vkv"; depends=[cubature data_table future_apply ggplot2 igraph maptools progressr raster Rcpp RcppArmadillo RcppProgress rgeos SearchTrees sf sp spdep]; }; spTDyn = derive2 { name="spTDyn"; version="2.0.1"; sha256="1wprn2adw4l5pkwkfzdpcr07jxgycx9kaf8w8mfv27nka5hacgqx"; depends=[coda sp spacetime spTimer]; }; spThin = derive2 { name="spThin"; version="0.2.0"; sha256="0j10j1cbbwp3baqm3b59rxlnd643mkx1mirlxpnr1ad2g7xpm69f"; depends=[fields knitr spam]; }; spTimer = derive2 { name="spTimer"; version="3.3.1"; sha256="0lf39n32ifsmbcf35h0g60xniw72mlrzvzax3k6kz5c5k1wszlba"; depends=[coda extraDistr sp spacetime]; }; - spaMM = derive2 { name="spaMM"; version="3.5.0"; sha256="0q3ajxiqzcc1nxydiapr55mxrcvmr7nidvlg51rhkxxh6zhn2ah4"; depends=[boot crayon gmp MASS Matrix minqa nlme nloptr pbapply proxy Rcpp RcppEigen ROI]; }; + spaMM = derive2 { name="spaMM"; version="3.7.34"; sha256="0qpg31fhfxnff26p5gl1gag504fz5agyzqiz1c604c0cb491p6qh"; depends=[boot crayon gmp MASS Matrix minqa nlme nloptr pbapply proxy Rcpp RcppEigen ROI]; }; spaa = derive2 { name="spaa"; version="0.2.2"; sha256="163iipz1knxx1lzby9a3n1f014yqkf25z1wpwwy4gbx7sia499d5"; depends=[]; }; space = derive2 { name="space"; version="0.1-1.1"; sha256="09dpksbda4lg5hax47a9h9shjmggza6583slvdj0fldblykpyxck"; depends=[]; }; spaceNet = derive2 { name="spaceNet"; version="1.2"; sha256="1s2672icxs0qvdhl52xhllgvh1i9mjfrn5j3icyw6h61ljbnhy11"; depends=[MASS mclust permute RcppTN Rfast sna vegan]; }; + spacefillr = derive2 { name="spacefillr"; version="0.2.0"; sha256="1gqwz5j26z7ar3syzgj734mxi77m6mj0jrij32grcls79m8iy329"; depends=[Rcpp]; }; spacesRGB = derive2 { name="spacesRGB"; version="1.3-0"; sha256="1flnvrmq0hdrhxmn5djbhc6fanqhmr1i3q5ik7qcxsb0jvnyincd"; depends=[]; }; spacesXYZ = derive2 { name="spacesXYZ"; version="1.1-1"; sha256="1jxwhpnfbqa2nz86l8sdxxj3qmasw1wmbii7wr8sqp2819jr5lnd"; depends=[]; }; - spacetime = derive2 { name="spacetime"; version="1.2-3"; sha256="0nxjp78vdnr8m2nn9czf1rp7b61md4fjfnyqdlgp982x5nb0nz6a"; depends=[intervals lattice sp xts zoo]; }; + spacetime = derive2 { name="spacetime"; version="1.2-4"; sha256="0khjq2x0bgmf0l6nrphx4fz9c03b87g5v48qb5myagvagscwq70z"; depends=[intervals lattice sp xts zoo]; }; spacey = derive2 { name="spacey"; version="0.1.1"; sha256="1p8kx3d08q9kz1wb286m3d8ckwkhfm5n42m65m4w5gz5kpfx0xfz"; depends=[httr jsonlite magrittr png raster rayshader rgdal]; }; spacyr = derive2 { name="spacyr"; version="1.2.1"; sha256="1b2ccgwsiqkvp7w37x8k7699c676q16vfrybkrfvyczyhki4s6nw"; depends=[data_table reticulate]; }; spaero = derive2 { name="spaero"; version="0.6.0"; sha256="0xigwi6w21y2fwicml0s2gylwnwp2qvrqskr0v8rd3bn01hg9ja3"; depends=[]; }; - spagmix = derive2 { name="spagmix"; version="0.3-2"; sha256="18hffiknsx7z6w6p5dwqmg9fwghv1x6nzsxdlx0wjd6iixcf6a54"; depends=[abind mvtnorm RandomFields sparr spatstat]; }; + spagmix = derive2 { name="spagmix"; version="0.3-4"; sha256="032dmz8cx4j5vl229gi1xkncc1wggfrf1a24qqwl2bzxrdfp27rw"; depends=[abind mvtnorm RandomFields sparr spatstat spatstat_core spatstat_geom spatstat_linnet]; }; spam = derive2 { name="spam"; version="2.6-0"; sha256="0p5ycvpry955ldrgbbq3syy91wx9425mddpn8r5m9xwlirjxv3v3"; depends=[dotCall64]; }; spam64 = derive2 { name="spam64"; version="2.6-0"; sha256="17i3s87hj3704al4shbjgp6fvai00xdx44wgfwgrfpbwya47q47n"; depends=[]; }; spanel = derive2 { name="spanel"; version="0.1"; sha256="1riyvvfij277mclgik41gyi01qv0k466wyk2wbqqhlvrlj79yzsc"; depends=[]; }; spanish = derive2 { name="spanish"; version="0.4.2"; sha256="15drc11lh0qxpww50p0smi8qxfbln82bx0yd74jqf71irhk5jxyp"; depends=[magrittr xml2]; }; - spant = derive2 { name="spant"; version="1.9.0"; sha256="0xzl6ay97sbmvr36pn7xb1r287a5cmdyf9g9inf2jl845xfh2g2b"; depends=[abind complexplus fields foreach irlba jsonlite magrittr MASS matrixcalc minpack_lm mmand nloptr nnls numDeriv plyr pracma ptw readr RNifti RNiftyReg signal smoother stringr tibble]; }; + spant = derive2 { name="spant"; version="1.11.0"; sha256="10mjh23shcg987pgqck440v1j4j2dmkmjdhfjvypxhlsadb8zjnf"; depends=[abind complexplus fields foreach irlba jsonlite magrittr MASS matrixcalc minpack_lm mmand nloptr nnls numDeriv plyr pracma ptw readr RNifti RNiftyReg signal smoother stringr tibble]; }; sparcl = derive2 { name="sparcl"; version="1.0.4"; sha256="138krflvfdlx4hlh90mswds51i8aw2vv00gm5lgkfsvxj4w324jg"; depends=[]; }; - spark_sas7bdat = derive2 { name="spark.sas7bdat"; version="1.2"; sha256="1kvzfjhf1q5jzlq5d04s7d96j63vnvqqrh8s03rwkl79h1dhqhhp"; depends=[sparklyr]; }; + spark_sas7bdat = derive2 { name="spark.sas7bdat"; version="1.4"; sha256="1s1hd6hvjxnfb3w10v93pggijmm2h4rcsf7ckl34j2sw9bvv7zka"; depends=[sparklyr]; }; sparkavro = derive2 { name="sparkavro"; version="0.3.0"; sha256="0g6ac9msfbx8f8j8rj0hvlxjsn317zyam207q7i8kf0hshs1r58f"; depends=[DBI dplyr sparklyr]; }; sparkbq = derive2 { name="sparkbq"; version="0.1.1"; sha256="0gccm8q5a45k9zm8f90r7fhcmriq8d038p022k7cikbr6rqsrmyh"; depends=[sparklyr]; }; sparkhail = derive2 { name="sparkhail"; version="0.1.1"; sha256="1a9p9i7fs6l9rx5ha6akjjl7qhfak01xsjg28ysv0imikmwp6hy7"; depends=[dplyr sparklyr sparklyr_nested]; }; sparkline = derive2 { name="sparkline"; version="2.0"; sha256="0lrr1lm7603di7x3mf53cp13d9ssjh9gmb43wa6z9yqapis2djm2"; depends=[htmltools htmlwidgets]; }; - sparklyr = derive2 { name="sparklyr"; version="1.5.2"; sha256="09l4hnz5p665w5fj38h0bhf2j9cr1rgl7a65yyihn9d7jncrmfsy"; depends=[assertthat base64enc config DBI dbplyr digest dplyr ellipsis forge generics globals glue httr jsonlite lifecycle openssl purrr r2d3 rappdirs rlang rprojroot rstudioapi stringr tibble tidyr tidyselect uuid vctrs withr xml2]; }; - sparklyr_flint = derive2 { name="sparklyr.flint"; version="0.2.0"; sha256="1yzr89jza2ya4sym9ckmifg5q1cgix24x9x9pbkbiv3i29whi0pr"; depends=[dbplyr dplyr rlang sparklyr]; }; + sparklyr = derive2 { name="sparklyr"; version="1.6.2"; sha256="0hq547dh31w2m0scxckv98dsysc2aq2krqggqf5kv7a3i4h212yp"; depends=[assertthat base64enc blob config DBI dbplyr digest dplyr ellipsis forge generics globals glue httr jsonlite lifecycle openssl purrr r2d3 rappdirs rlang rprojroot rstudioapi stringr tibble tidyr tidyselect uuid vctrs withr xml2]; }; + sparklyr_flint = derive2 { name="sparklyr.flint"; version="0.2.1"; sha256="03dm75nyspnkqhnfmj0w6gliw1b4sfb17mmq5mmzd4a54fbf766j"; depends=[dbplyr dplyr rlang sparklyr]; }; sparklyr_nested = derive2 { name="sparklyr.nested"; version="0.0.3"; sha256="0lva7fbjp253kxq3970h52cr8s52xycbi03d5shsyna8grhkbczj"; depends=[dplyr jsonlite listviewer purrr rlang sparklyr]; }; sparktex = derive2 { name="sparktex"; version="0.1"; sha256="0r6jnn9fj166pdhnjbsaqmfmnkq0qr1cjprihlnln9jad05mrkjx"; depends=[]; }; sparktf = derive2 { name="sparktf"; version="0.1.0"; sha256="0jd018n7553q0ldv6whxbj2s38myig0m8zq4fbp8fsv34q5wnsx4"; depends=[sparklyr]; }; sparkwarc = derive2 { name="sparkwarc"; version="0.1.5"; sha256="033clhl3pknjc7yzwa67l2l24sb2n61amc60zbvk2vc61yszl66f"; depends=[DBI Rcpp sparklyr]; }; - sparkxgb = derive2 { name="sparkxgb"; version="0.1.0"; sha256="1gyvmsm7q6w55p62cysrnkn69kq5rr4vwkd5vrcgbwdy3fbpl9xq"; depends=[forge sparklyr]; }; - sparr = derive2 { name="sparr"; version="2.2-13"; sha256="1cn8bzlfairfrxfwwdap0pnaa97rn9h13jz54il8cn9zacnzb8yc"; depends=[doParallel foreach misc3d spatstat spatstat_utils]; }; - sparrpowR = derive2 { name="sparrpowR"; version="0.1.3"; sha256="18p8yym52cjb4pn7cw05f4ibzz1l9g48rq235g3wrmr552k839pi"; depends=[doParallel fields foreach raster sp sparr spatstat]; }; + sparkxgb = derive2 { name="sparkxgb"; version="0.1.1"; sha256="1h7jk76v9wfm8qzqy6lhsmsp767wydwba9xyqszndl88295iac1j"; depends=[forge sparklyr]; }; + sparr = derive2 { name="sparr"; version="2.2-15"; sha256="0c0vr4js6rcbyk85sld28m130d5zdymncpipzpkpzis3ismnlgp4"; depends=[doParallel foreach misc3d spatstat spatstat_core spatstat_geom spatstat_utils]; }; + sparrpowR = derive2 { name="sparrpowR"; version="0.2.1"; sha256="1lq6949zvgn1d1hp6smmp6h024pg9ha22k626hv6wrvm1pyskkim"; depends=[doFuture doRNG fields foreach future iterators lifecycle raster sp sparr spatstat spatstat_core spatstat_geom spatstat_linnet]; }; sparseBC = derive2 { name="sparseBC"; version="1.2"; sha256="0a1siyi9kc805qji4alnw3c21spf4iw4wpsbfl50zvs52p8vl8w2"; depends=[fields glasso]; }; sparseEigen = derive2 { name="sparseEigen"; version="0.1.0"; sha256="0vqcy61rarmp3liz8fr3vs3y40hkb3wfw89b5xsj1byaiap4772s"; depends=[]; }; - sparseFLMM = derive2 { name="sparseFLMM"; version="0.3.1"; sha256="1v500lfzcxjz8xbwds1hlz449fm35nw4yv3gqcwklx51k31vpshv"; depends=[data_table MASS Matrix mgcv refund]; }; + sparseFLMM = derive2 { name="sparseFLMM"; version="0.4.0"; sha256="0pwi836y3dgf0fjw72q904ks7xfnj4273891j9z07v1yz47dad1d"; depends=[data_table MASS Matrix mgcv refund]; }; sparseHessianFD = derive2 { name="sparseHessianFD"; version="0.3.3.4"; sha256="1vm853x5vvk745mm68wx0bkimmgwnbrdhj2rwy1nmgpk1lzi8vq6"; depends=[Matrix Rcpp RcppEigen]; }; sparseIndexTracking = derive2 { name="sparseIndexTracking"; version="0.1.1"; sha256="0bgh29j22jm1yg2jp75xvv9jmqacb66vgv7ygf0xgnrwyrkxkm66"; depends=[]; }; sparseLDA = derive2 { name="sparseLDA"; version="0.1-9"; sha256="1k3sw9kc40yxnfss4vrsx34qxmv8ssddyhbfjhxrdldvblhbwchb"; depends=[elasticnet MASS mda]; }; + sparseLRMatrix = derive2 { name="sparseLRMatrix"; version="0.1.0"; sha256="0b1qczhzbr67k5ayj7avmibyzvfg4jc67mb2m2lvifsf9wrqlqxb"; depends=[Matrix RSpectra]; }; sparseLTSEigen = derive2 { name="sparseLTSEigen"; version="0.2.0.1"; sha256="08xhpm9hp9x9rmiys4fvh9y4z2xsdkzckzw3lq0vlzvjcaynvidq"; depends=[Rcpp RcppEigen robustHD]; }; sparseMVN = derive2 { name="sparseMVN"; version="0.2.1.1"; sha256="0ikh1i4vid6r4sx9pdjqc5wbh4xdj966mr0b7jb1vjw18wrzad8q"; depends=[Matrix]; }; sparseMatEst = derive2 { name="sparseMatEst"; version="1.0.0"; sha256="06y061zl6id7cfw3cqzvwykzlijmala8hj61i04mgc491ngybimv"; depends=[glasso]; }; sparseSEM = derive2 { name="sparseSEM"; version="2.5"; sha256="0ig8apsi94kvbcq3i8nzmywbdizlss7c6r9bppcyl9lxgikc3cds"; depends=[]; }; sparseSVM = derive2 { name="sparseSVM"; version="1.1-6"; sha256="0b0qiikjyyh9qfd4jl69zqnlp7adxq63mwsxvgwvyc0pv5ccg8i0"; depends=[]; }; sparsebn = derive2 { name="sparsebn"; version="0.1.2"; sha256="1b1601n3nmxck6a27xqxpsa79p4xnz7yyzdfqiddn9zd2b4v9wc5"; depends=[ccdrAlgorithm discretecdAlgorithm sparsebnUtils]; }; - sparsebnUtils = derive2 { name="sparsebnUtils"; version="0.0.7"; sha256="1a810wrjvgzqmlgcx1lnvxz8j1v8ycfqwk9acnm84c4lmb8rkyx0"; depends=[Matrix nnet]; }; + sparsebnUtils = derive2 { name="sparsebnUtils"; version="0.0.8"; sha256="1x1phd33r3ci72sbm0pkmigwbi4x59pdz8n5919119mkxdf740vs"; depends=[Matrix nnet]; }; sparseinv = derive2 { name="sparseinv"; version="0.1.3"; sha256="06inzix9m7b5g7c97lyvyl2g7fdr4iz60791hl2w9mah7nd6bfja"; depends=[Matrix Rcpp spam]; }; sparsenet = derive2 { name="sparsenet"; version="1.4"; sha256="1r7xmpn3r8dq1zm6ghygks3l014kqlrpfgsl8q23w7rly8ksw3m9"; depends=[Matrix shape]; }; sparsepca = derive2 { name="sparsepca"; version="0.1.2"; sha256="0wk2nm37p15gb8i4s45izzzdmwywr56kv4g0j3jd5s3slm224vv4"; depends=[rsvd]; }; sparsepp = derive2 { name="sparsepp"; version="1.22"; sha256="0wa1585pkbn3y11apyim4z1ixn300c1yyv9bf2qldb6cjfiv7699"; depends=[]; }; sparsereg = derive2 { name="sparsereg"; version="1.2"; sha256="1ipsang2fppmjx4h5ljgzx3c44z3lggc376ghrqqgmxb5ql8bcp3"; depends=[coda ggplot2 GIGrvg glmnet gridExtra MASS MCMCpack msm Rcpp RcppArmadillo VGAM]; }; - sparsestep = derive2 { name="sparsestep"; version="1.0.0"; sha256="0f3wrwiyn990sn3x9r50zgs8cr76nmyisdc7qismgx1nn5yx5z0g"; depends=[Matrix]; }; + sparsestep = derive2 { name="sparsestep"; version="1.0.1"; sha256="1mvwjd3ks9nf63nmd13ncxrs12nrypw6vg4xpqympzc57p73qvmi"; depends=[Matrix]; }; sparsesvd = derive2 { name="sparsesvd"; version="0.2"; sha256="1xm969fjq3fv1p2sqza2apz8picibj4s2agpwf1sx9nwn3b587qs"; depends=[Matrix]; }; - sparsevar = derive2 { name="sparsevar"; version="0.0.11"; sha256="18cylbi788ibpry6h9yphrwx2wwsaa25bq2s13h0dcfxyicl2f9p"; depends=[corpcor doParallel ggplot2 glmnet Matrix mvtnorm ncvreg picasso reshape2]; }; + sparsevar = derive2 { name="sparsevar"; version="0.1.0"; sha256="1kcy6bm04mccky529nryy5l001bv71hx304ysiabl4myakw0rwy7"; depends=[corpcor doParallel ggplot2 glmnet Matrix mvtnorm ncvreg picasso reshape2]; }; + sparsevb = derive2 { name="sparsevb"; version="0.1.0"; sha256="1cigq8hwymrrkiy3iyrxsjjbj228ahrd7mq9lqar4jlb925jzqx4"; depends=[glmnet Rcpp RcppArmadillo RcppEnsmallen selectiveInference]; }; sparsio = derive2 { name="sparsio"; version="1.0.1"; sha256="181kzs9x3h497c7shfalbzrjz05bkj7mmjh9nyphxyi2jjrr6y1q"; depends=[Matrix Rcpp]; }; - sparta = derive2 { name="sparta"; version="0.7.0"; sha256="0x7lb6fng8xz1c53300aq62rpvksjmadk3pd0qz6n41yc68nmhwg"; depends=[Rcpp RcppArmadillo]; }; + sparta = derive2 { name="sparta"; version="0.7.3"; sha256="172fmwddawm15r5w4k9jv16dzzw3gvjgxn7f5ihvdcgh3qj2flns"; depends=[Rcpp RcppArmadillo]; }; spass = derive2 { name="spass"; version="1.3"; sha256="1c148z0i3d185hnf54xmgppjrblv3b2s3sm0lmj78gvav04mj5s4"; depends=[geepack MASS multcomp mvtnorm Rcpp]; }; + spatPomp = derive2 { name="spatPomp"; version="0.21.0.0"; sha256="1msrf8kdcdr96xhl6byz20ldgy0k98pac8wvia0wmjf6404z91ln"; depends=[abind doParallel dplyr foreach ggplot2 magrittr pomp rlang stringr tidyr]; }; spate = derive2 { name="spate"; version="1.7"; sha256="1cr5jjrycfj9larsqgzfakk4qgfz8m5djg4ddzk6s3lg2iw06y43"; depends=[mvtnorm truncnorm]; }; spatgraphs = derive2 { name="spatgraphs"; version="3.2-2"; sha256="09bbcqgmbg6a65mnxivr4pghsanj22x1j0l4hq8bzpwgbas7byhy"; depends=[Matrix Rcpp]; }; spathial = derive2 { name="spathial"; version="0.1.2"; sha256="1vwzcwpmx8kwv821vjf940qd5am3k0shf1s14jva71mgxs70ddmb"; depends=[class igraph irlba knitr MASS matrixStats pracma rmarkdown Rtsne]; }; - spatial = derive2 { name="spatial"; version="7.3-12"; sha256="0qrdhzd5r78iwi46nk8jr56dzz5l5imkflxjw64d0ys0wyg06fbn"; depends=[]; }; + spatial = derive2 { name="spatial"; version="7.3-14"; sha256="0dlafq744mahxpb13llmsrg54fzww8ld1nbxmr7m851gff11kk2j"; depends=[]; }; spatialClust = derive2 { name="spatialClust"; version="1.1.1"; sha256="042yrmh1rb0hxynxlbdpcissgy9zazs5aqx7vj388ibynzijck3r"; depends=[ggplot2 maptools rgeos sp]; }; spatialCovariance = derive2 { name="spatialCovariance"; version="0.6-9"; sha256="1m86s9a059spp97y37dcirrgjshcqzpdj11cq92vji624w4nrhlb"; depends=[]; }; - spatialEco = derive2 { name="spatialEco"; version="1.3-3"; sha256="0cddc69y90p9p6bdd82r3yi7ljjr1p813chvriqy2nahhg00yxia"; depends=[MASS raster rgeos sf sp spatstat spdep]; }; + spatialEco = derive2 { name="spatialEco"; version="1.3-6"; sha256="08sddjh03hqsyiwk7hh1rhbcm1y05gb0vla2bcfh8bd355qvffx5"; depends=[MASS raster rgeos sf sp spatstat_core spatstat_geom spdep]; }; spatialfusion = derive2 { name="spatialfusion"; version="0.6-2"; sha256="1vqv4424m8rnmyg463mvnk26q7dis4wd47swyyc8f8r4qd85agnz"; depends=[fields Rcpp rstan SDraw sp]; }; spatialnbda = derive2 { name="spatialnbda"; version="1.0"; sha256="14mx5jybymasyia752f3vnr5vmswcavbz8bpqr69vlxphw27qkwk"; depends=[mvtnorm SocialNetworks]; }; spatialprobit = derive2 { name="spatialprobit"; version="0.9-11"; sha256="1cpxxylc0pm7h9m83m2cklrh4jni5x79r5m5gibxi6viahwxn9kc"; depends=[Matrix mvtnorm spdep tmvtnorm]; }; - spatialreg = derive2 { name="spatialreg"; version="1.1-5"; sha256="0zdj67rvfvssjch5hwyi4gvyr7pjgfjrkbhnc4q9psfjp9rhggyx"; depends=[boot coda expm gmodels LearnBayes MASS Matrix nlme spData spdep]; }; + spatialreg = derive2 { name="spatialreg"; version="1.1-8"; sha256="045fn7zib7asimj43bs9b9mr2fy1fpa31a077bxbqn4729hrdxs2"; depends=[boot coda expm gmodels LearnBayes MASS Matrix nlme spData spdep]; }; spatialrisk = derive2 { name="spatialrisk"; version="0.6.7"; sha256="1vd90v55wy7b1aqhlr2b6x445nwghn94qyz39439pcmp5y9n8zb8"; depends=[automap classInt dplyr fs ggplot2 gstat lubridate mgcv Rcpp RcppProgress sf sp tmap viridis vroom]; }; - spatialsegregation = derive2 { name="spatialsegregation"; version="2.45"; sha256="04ibvk6shs15b8piln2lcnlj8s5gy6r7wraz6591dbc31grzaa36"; depends=[spatstat]; }; + spatialsample = derive2 { name="spatialsample"; version="0.1.0"; sha256="0w57pl09pamx8mmrwyj2hixxqp9cf0xg06gvsrrg4abjbkj0i1pr"; depends=[dplyr purrr rlang rsample tibble tidyselect vctrs]; }; spatialwarnings = derive2 { name="spatialwarnings"; version="2.0.0"; sha256="02dd4xyl3n6mfl201cmi0n2mq9j3p7mf0nn67nm6nnvgmkrpgxhg"; depends=[future future_apply ggplot2 gsl plyr Rcpp RcppArmadillo tidyr]; }; spatialwidget = derive2 { name="spatialwidget"; version="0.2.3"; sha256="0j0v0cyqndlg9p7g03gp1br9b2i3p50abzpw67k3cawm96a87crj"; depends=[BH colourvalues geojsonsf geometries jsonify rapidjsonr Rcpp sfheaders]; }; - spatsoc = derive2 { name="spatsoc"; version="0.1.15"; sha256="0w8bf2lh8p2823sx6mm8dyyhd3n2aiz1cn8f5bp3j26bg6q9gr2i"; depends=[adehabitatHR data_table igraph rgeos sp]; }; - spatstat = derive2 { name="spatstat"; version="1.64-1"; sha256="06jmxfs9kz9qqi3ichfgn8dglwb87kq2nl578p83za5psv8cfgya"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; - spatstat_Knet = derive2 { name="spatstat.Knet"; version="1.12-2"; sha256="01h01nqb18vjvr50xfn3zl7nwbs62gzjxdj6mjs3lxz3y9ljsmh1"; depends=[Matrix spatstat spatstat_utils]; }; - spatstat_data = derive2 { name="spatstat.data"; version="1.7-0"; sha256="0by10dx72jjn6rvgrdj4xwh4zg6vxi4cp536aq4b6drb7za95hdv"; depends=[Matrix spatstat_utils]; }; - spatstat_gui = derive2 { name="spatstat.gui"; version="1.0-2"; sha256="07lk3xrg5cyvgvw2xwvi77s4ma8qbnmy4whsvm1wdfvw40c0mfrz"; depends=[rpanel spatstat spatstat_utils]; }; - spatstat_local = derive2 { name="spatstat.local"; version="3.6-0"; sha256="19kv85smy8jp2bx1mgppav50k07xm8zvmf7snzj29rrspiws7sig"; depends=[spatstat spatstat_utils tensor]; }; - spatstat_sparse = derive2 { name="spatstat.sparse"; version="1.1-0"; sha256="1iz6s1y765xi3n5x81n4fs52f4zr6r95mpg8263j0hjiqqg54vww"; depends=[abind Matrix spatstat_utils tensor]; }; - spatstat_utils = derive2 { name="spatstat.utils"; version="1.17-0"; sha256="08h9kzkkxvlnngxnv5mdylfali5jj4yhgbr8kvf8l7glswz6ik9r"; depends=[]; }; - spatsurv = derive2 { name="spatsurv"; version="1.5"; sha256="1l1yxh2ix13314z4mjpf9nz8ad8423v09vzwq95qlazc27hlhyyd"; depends=[fields iterators lubridate Matrix RandomFields raster RColorBrewer rgeos sp spatstat stringr survival]; }; + spatsoc = derive2 { name="spatsoc"; version="0.1.16"; sha256="1pyw6606kwskgcfnzvgzvy8n4i9s3mmn1789d1lhk04h14r33fns"; depends=[adehabitatHR data_table igraph rgeos sp]; }; + spatstat = derive2 { name="spatstat"; version="2.1-0"; sha256="0vr5md53247v6crvjvg9m82vc6h914zzvkzfkga8x79hv35ii4as"; depends=[spatstat_core spatstat_data spatstat_geom spatstat_linnet spatstat_utils]; }; + spatstat_Knet = derive2 { name="spatstat.Knet"; version="2.0-0"; sha256="1w9ag7v18mvy4dl1gz2w8xjhw9n2sf9zycqz3mraajis831c76ix"; depends=[Matrix spatstat_core spatstat_data spatstat_geom spatstat_linnet spatstat_sparse spatstat_utils]; }; + spatstat_core = derive2 { name="spatstat.core"; version="2.1-2"; sha256="0l0x461m8v93b15ywwb39mmy86qb8nsmas075x5lrzf9c31zdyns"; depends=[abind goftest Matrix mgcv nlme rpart spatstat_data spatstat_geom spatstat_sparse spatstat_utils tensor]; }; + spatstat_data = derive2 { name="spatstat.data"; version="2.1-0"; sha256="0csmz5vjaxnznkbsfah8qd3v8p0y56jvis01ialxzvf71snl160v"; depends=[Matrix spatstat_utils]; }; + spatstat_geom = derive2 { name="spatstat.geom"; version="2.1-0"; sha256="0f7rc35d8qyldf471iarbyxddwc7931g2bcbqyrz76rhgvwbdp2m"; depends=[deldir polyclip spatstat_data spatstat_utils]; }; + spatstat_gui = derive2 { name="spatstat.gui"; version="2.0-0"; sha256="0v26pmi6ir38hsfhkmkz7njf8b12y8dgacqz54vy9giq73k71j14"; depends=[rpanel spatstat_core spatstat_data spatstat_geom spatstat_linnet spatstat_utils]; }; + spatstat_linnet = derive2 { name="spatstat.linnet"; version="2.1-1"; sha256="1ia0qgggddiwhhyd3q516f3p6by0p4xnq26wqz7410n2ja60bbb4"; depends=[Matrix spatstat_core spatstat_data spatstat_geom spatstat_utils]; }; + spatstat_local = derive2 { name="spatstat.local"; version="4.1-1"; sha256="185ypf91d5faybm6ixiz419wsip2swsg3vsbbw3z4w1kqrj7m884"; depends=[spatstat_core spatstat_data spatstat_geom spatstat_sparse spatstat_utils tensor]; }; + spatstat_sparse = derive2 { name="spatstat.sparse"; version="2.0-0"; sha256="1iqrpazb88s4w208adf2qgm4ajwz3kwqck65k9g5l28zw9jcxyr7"; depends=[abind Matrix spatstat_utils tensor]; }; + spatstat_utils = derive2 { name="spatstat.utils"; version="2.1-0"; sha256="18gqsc1a85pk69aifi10wprv1c0lci3zxp4wqjb27dlmlbz6jdgd"; depends=[]; }; + spatsurv = derive2 { name="spatsurv"; version="1.6"; sha256="02bq3hvvjfxndskd5yrchq0r9dv7mxplzq3pvs3jrsd35sfcns3w"; depends=[fields iterators lubridate Matrix RandomFields raster RColorBrewer rgeos sp spatstat spatstat_core spatstat_geom stringr survival]; }; spbabel = derive2 { name="spbabel"; version="0.5.5"; sha256="0yfkz28nfvl3rm0bxljb3y19zhnx7pabxy81d835pbfmjq5vvp51"; depends=[dplyr rlang sp tibble]; }; - spc = derive2 { name="spc"; version="0.6.4"; sha256="0r2ydj4mckpmf41kwn74xbd408xd3mx017l24cikx304n95a9j7y"; depends=[]; }; + spc = derive2 { name="spc"; version="0.6.5"; sha256="1s9f67m3a52mzk5s6hh9jv80m721s0z43x2qj2d4ski2jwqw0iyr"; depends=[]; }; spc4sts = derive2 { name="spc4sts"; version="0.5.2"; sha256="039z6dnry5c2brmh7jsnb6cvb7a8nig1rrf4d4i5bpifi2x1hf06"; depends=[gridExtra LS2Wstat rpart]; }; spcadjust = derive2 { name="spcadjust"; version="1.1"; sha256="016i3zaaq800x4niz4fixa57nfj1m10sz5xskff4vq4v9fjn2sl0"; depends=[]; }; - spcosa = derive2 { name="spcosa"; version="0.3-9"; sha256="1arwrkv2sj30mbz2a2mifag2yay5bswi4f1rrjhf16ap78xdg7pj"; depends=[ggplot2 rJava sp]; }; spcov = derive2 { name="spcov"; version="1.01"; sha256="1brmy64wbk56bwz9va7mc86a0ajbfy09qpjafyq2jv7gm7a35ph5"; depends=[]; }; spcr = derive2 { name="spcr"; version="2.0"; sha256="1n0lva9brpzxysw6p7l88cj8d46jng2zd7zvr5brqldzd3yl63l9"; depends=[]; }; spd = derive2 { name="spd"; version="2.0-1"; sha256="00zxh4ri47b61jkcjf5idl9hhlfld6rhczsnhmjsax59884f2i8m"; depends=[KernSmooth]; }; - spdep = derive2 { name="spdep"; version="1.1-5"; sha256="0pbd7wrg5v44p2yxsjp774lpyzap3madir5mn5p3ix7ibk7ldjs7"; depends=[boot coda deldir expm gmodels LearnBayes MASS Matrix nlme sf sp spData]; }; + spdep = derive2 { name="spdep"; version="1.1-7"; sha256="0sg417d95paww625663lgmk6jwhs88djqzc96gbs1hxazlf77qb1"; depends=[boot coda deldir expm gmodels LearnBayes MASS Matrix nlme sf sp spData]; }; spdownscale = derive2 { name="spdownscale"; version="0.1.0"; sha256="0pl560km9629iwy13h7359ab7ixzs09hg986kvk0xbnc348srb86"; depends=[]; }; spdplyr = derive2 { name="spdplyr"; version="0.4.0"; sha256="0lijp78wgrky103137vfk3k4s051qppd6jq6s065k9i7y1azbpc1"; depends=[dplyr rlang sp spbabel tibble]; }; spduration = derive2 { name="spduration"; version="0.17.1"; sha256="1hsz4hcw85f1rj2pd8ppzsd1r8fh4yf6axc11yf2hd287ghzzxzy"; depends=[corpcor forecast MASS plyr Rcpp RcppArmadillo separationplot xtable]; }; spdynmod = derive2 { name="spdynmod"; version="1.1.5"; sha256="1qxpvjqvfcjsy3z0naz438aa95v2d3imdfxj20vfb2zwpv9l3215"; depends=[animation deSolve raster sp]; }; spe = derive2 { name="spe"; version="1.1.2"; sha256="0xyx42n3gcsgqmy80nc9la6p6gq07anpzx0afwffyx9fv20fvys0"; depends=[]; }; + speakr = derive2 { name="speakr"; version="3.1.1"; sha256="0dwa50knrwci7lggl99615prfvyjrbqqs0bx3nsgd1zh0ap530cp"; depends=[ggplot2 lifecycle readr stringr tibble]; }; speaq = derive2 { name="speaq"; version="2.6.1"; sha256="15v7lr2mczqc5ma2n9gyszfkyljnsds6c8lc5vy0qkvwfl01sv3v"; depends=[cluster data_table doSNOW foreach ggplot2 gridExtra impute MassSpecWavelet missForest mQTL reshape2 Rfast rvest xml2]; }; spearmanCI = derive2 { name="spearmanCI"; version="1.0"; sha256="1xi51dphv91j5hgrd25sqs1li0g24cwpa1k162arw5b0qfl04f17"; depends=[emplik MASS]; }; spec = derive2 { name="spec"; version="0.1.7"; sha256="0zgs9yki11wysvjnx88gl8iv0mcsbrasg29sbasp0855x5l8cg8k"; depends=[csv encode magrittr]; }; speccalt = derive2 { name="speccalt"; version="0.1.1"; sha256="0j7rbidmmx78vgwsqvqjbjjh92fnkf2sdx0q79xlpjl2dph7d6l6"; depends=[]; }; specklestar = derive2 { name="specklestar"; version="0.0.1.7"; sha256="04vm989yi31vqnf5rs6cdyikm4jzfd9njxh0ls3dvjrg19ipsnmn"; depends=[Rcpp]; }; - specmine = derive2 { name="specmine"; version="3.0.3"; sha256="1ysw0nrv91xdwmcz7w8ngdfp83jmjj4ay0dj7mwvivn7g5456agz"; depends=[baseline caret compare e1071 ellipse genefilter GGally ggplot2 impute imputeTS MASS Metrics pcaPP pls RColorBrewer readJDX speaq specmine_datasets]; }; - specmine_datasets = derive2 { name="specmine.datasets"; version="0.0.1"; sha256="1mr7cxr017lwxhdgw2kndjidxj4jj66ch6gxddjcplgq8wc158vx"; depends=[xcms]; }; + specmine = derive2 { name="specmine"; version="3.1.4"; sha256="1vw5zxwhz67323lxb6l7hjiw3qmd0g862azizdazh8lhkriin9rm"; depends=[baseline caret compare e1071 ellipse genefilter GGally ggplot2 impute imputeTS MASS Metrics mrbin narray pcaPP plotly pls RColorBrewer readJDX speaq specmine_datasets]; }; + specmine_datasets = derive2 { name="specmine.datasets"; version="0.0.2"; sha256="0amqb4qy5ac1jc4g95sf4678ll3xhscyrcxq6pgh8imfyk1ifrmx"; depends=[xcms]; }; specr = derive2 { name="specr"; version="0.2.1"; sha256="17bc7f644g40zsfxv3sw542piqgg09w3m3q14jgrifc8sw0ljvdf"; depends=[broom cowplot dplyr ggplot2 ggraph glue igraph lme4 magrittr purrr rlang tibble tidyr]; }; specs = derive2 { name="specs"; version="0.1.1"; sha256="0x5s7aikj5x1dgxygizh2mcni74hy6dm7084h1pqqbh5ans00c6n"; depends=[Rcpp RcppArmadillo]; }; - spectacles = derive2 { name="spectacles"; version="0.5-2-2"; sha256="0nr2s6mnnir7jwrv80s2vk8wffqd7dl7xj82ss1idshqxk0dliz3"; depends=[baseline epiR ggplot2 plyr reshape2 signal stringr]; }; - spectral = derive2 { name="spectral"; version="1.3"; sha256="1x5fskivs08wh1ka63i40m1mzsgq1vl25dglzbk9qywxxphvfdmn"; depends=[lattice rasterImage]; }; + spectacles = derive2 { name="spectacles"; version="0.5-3"; sha256="0fwj4407dwpvbjhjqwfxb455698ifyramwyddw4jrzgaf11vc4ii"; depends=[baseline epiR ggplot2 plyr reshape2 signal stringr]; }; + spectral = derive2 { name="spectral"; version="2.0"; sha256="116gn41nvlw7jmr6qx9pl8hckg2pzgzx49kql52j5xqf39sgyx9p"; depends=[lattice pbapply rasterImage RhpcBLASctl]; }; spectralAnalysis = derive2 { name="spectralAnalysis"; version="3.12.0"; sha256="0mz01hx86qi65k6vzz9k1j9q7gi10dh14cqvrlfy93f3kmi52q0x"; depends=[baseline BiocGenerics data_table ggplot2 hNMF jsonlite magrittr NMF nnls plotly plyr RColorBrewer signal viridis]; }; spectralGP = derive2 { name="spectralGP"; version="1.3.3"; sha256="1jf09nsil4r90vdj7n1k6ma9dzzx3bwv0fa7svil9pxrd2zlbkbs"; depends=[]; }; spectralGraphTopology = derive2 { name="spectralGraphTopology"; version="0.2.0"; sha256="02j374zsz4ba8ldy52x43rih1p77b56cv5xlbycj5wmkzny2gzx1"; depends=[MASS Matrix progress Rcpp RcppArmadillo RcppEigen rlist]; }; spectrolab = derive2 { name="spectrolab"; version="0.0.10"; sha256="1hmz5a5x8xf2xw6qz6h21gzyswi0al4bnpygxf0rhg4i9wpfch9j"; depends=[prospectr RColorBrewer shiny shinyjs]; }; sped = derive2 { name="sped"; version="0.2-1"; sha256="05igpk8szdcs6kjhpmd9dmjvqdg199pz3hi0rwkhdjglxivvjzjn"; depends=[pooh]; }; speech = derive2 { name="speech"; version="0.1.0"; sha256="007s32w8qr45x1n40xdh85a329cgmm3809bi62ghnxzfny9vjb07"; depends=[dplyr lubridate magrittr pdftools purrr stringr tabulizer tibble tidyr tm]; }; - speedglm = derive2 { name="speedglm"; version="0.3-2"; sha256="1b25zimk0z7ad62yacqdg0zk0qs0jja4i918ym942xfw4j1z3jjz"; depends=[MASS Matrix]; }; + speedglm = derive2 { name="speedglm"; version="0.3-3"; sha256="0f37w4lj8dpcg1sfkd7cv6qpdkanmb97mnd8zih2fxzv8bpd0rfh"; depends=[MASS Matrix]; }; spef = derive2 { name="spef"; version="1.0.9"; sha256="115lmv2a21ws1mj22v1fbk72mqn3siqmw3frbg4nci96lnyr7qh6"; depends=[BB ggplot2 nleqslv plyr sm SQUAREM survival]; }; speff2trial = derive2 { name="speff2trial"; version="1.0.4"; sha256="0dj5mh2sdp6j4ijgv14hjr39rasab8g83lx1d9y50av11yhbf2pw"; depends=[leaps survival]; }; spellcheckr = derive2 { name="spellcheckr"; version="0.1.2"; sha256="09snc1ymzr4njnr3w502b84dqwjjd414higjxqi48jvh27br5k1l"; depends=[data_table dplyr stringr]; }; spelling = derive2 { name="spelling"; version="2.2"; sha256="179nj9w1v27qq9q5240ddvggp0795998sxyqjvbqjvq9dmach3bl"; depends=[commonmark hunspell knitr xml2]; }; spemd = derive2 { name="spemd"; version="0.1-1"; sha256="1aw8dg2fm8qd95bgim2kjwp7ax4b2g78521llsxv7fhdj9hl7rgw"; depends=[MBA sp spdep]; }; sperich = derive2 { name="sperich"; version="1.5-8"; sha256="0v4mnv9nl0dvmmfx10w03k02pwjjnip9526m3j1kpgn6c4wk1h93"; depends=[foreach rgdal sp]; }; - sperrorest = derive2 { name="sperrorest"; version="3.0.1"; sha256="0lj8iwl5x9krxw9ffbxxgi94imlhyc9zzl5p90xylk5dsn0gcb76"; depends=[future future_apply ROCR stringr]; }; + sperrorest = derive2 { name="sperrorest"; version="3.0.2"; sha256="195bdg8fd619z0i8jw1rm1zm2qcdq7hb2h5ynq1lf3a2j0y3fdpl"; depends=[future future_apply ROCR stringr]; }; spex = derive2 { name="spex"; version="0.7.1"; sha256="0lsmh1sywd4si0v10aix44hybwph3gan8w8cxz956dcgkz60p41v"; depends=[crsmeta quadmesh raster reproj sp]; }; spfda = derive2 { name="spfda"; version="0.9.0"; sha256="156vs1f75x0wbf65fwzkhlbda649sryf58xixi7gbfjzn873w111"; depends=[mathjaxr]; }; spfilteR = derive2 { name="spfilteR"; version="1.0.0"; sha256="0pldarr2kdf7fkkdpmpx5azqzgfwzqbd6qb4fg7xjsj78bza6fif"; depends=[]; }; @@ -15219,8 +15825,8 @@ in with self; { spherepc = derive2 { name="spherepc"; version="0.1.4"; sha256="0jyaanwb78gv3cb1ig86h8cjaw35pxwx7hq53kc9iwjfhkrmc2j3"; depends=[geosphere rgl sphereplot]; }; sphereplot = derive2 { name="sphereplot"; version="1.5"; sha256="1i1p20h95cgw5wqp9bwfs9nygm4dxzsggz08ncjs1xrsvhhq9air"; depends=[rgl]; }; sphet = derive2 { name="sphet"; version="1.7"; sha256="0savvqz3v5awsr7kcghg6yzkqdpm01kwp7jrg9ajfb3146gg8mlq"; depends=[Matrix nlme sp spdep]; }; - spi = derive2 { name="spi"; version="1.1"; sha256="0gc504f7sji5x0kmsidnwfm7l5g4b1asl3jkn2jzsf2nvjnplx1z"; depends=[]; }; - spiR = derive2 { name="spiR"; version="0.1.1"; sha256="10l93f1sw4i2fd67jni32758kmnamxqxsf671k57pbf4jyczwfyy"; depends=[dplyr gsheet reshape2]; }; + spiR = derive2 { name="spiR"; version="0.2.1"; sha256="0v3304d0ar6344377m6zd4p6f9m8ibq37i5ys4lnxnw41lhjx1x2"; depends=[dplyr ggplot2 ggsci gsheet lubridate readr reshape2]; }; + spidR = derive2 { name="spidR"; version="1.0.1"; sha256="06499ivmxxic673y0j9i841xnffqnv4nlsfircqd09aixn8d90w7"; depends=[httr jsonlite rgbif rworldmap rworldxtra]; }; spider = derive2 { name="spider"; version="1.5.0"; sha256="1y034v42jxjl3vj87iz5kaizq7fwppmn56z7yyvrrmk5ps4nqr1j"; depends=[ape pegas]; }; spiderbar = derive2 { name="spiderbar"; version="0.2.3"; sha256="0sjwaar052502zbkdlyrr2l117n1gkigq9r44dfb3jncsq7pkpa7"; depends=[Rcpp]; }; spiders = derive2 { name="spiders"; version="1.2"; sha256="1qklm178bgkgpvrjf024jphsdh9can8300sf0702l4h0rk2daqbq"; depends=[plyr]; }; @@ -15229,54 +15835,57 @@ in with self; { spikeslab = derive2 { name="spikeslab"; version="1.1.5"; sha256="0dzkipbrpwki6fyk4hqlql3yhadwmclgbrx00bxahrmlaz1vjzh2"; depends=[lars randomForest]; }; spinBayes = derive2 { name="spinBayes"; version="0.1.0"; sha256="1qgqxxk4n17wj3q07irm2qj6lwc5188iwwbdkf588hvfy86lwpj8"; depends=[glmnet MASS Rcpp RcppArmadillo]; }; spind = derive2 { name="spind"; version="2.2.1"; sha256="1yasqy086h4dv348krisc024mic0dvdsncqys95l85924djlfipp"; depends=[gee geepack ggplot2 lattice MASS RColorBrewer rje rlang splancs stringr waveslim]; }; - spinifex = derive2 { name="spinifex"; version="0.2.7"; sha256="1adgkadwqb3k75gc1l5wwdkvhlx54wviskzw2776ln914kh2in7h"; depends=[dplyr gganimate ggplot2 plotly RColorBrewer shiny tourr]; }; + spinifex = derive2 { name="spinifex"; version="0.2.8"; sha256="0zb10rnywycy93xvc9awprq4rq023lgnx5fkh47zqjcf7i5jhxx5"; depends=[gganimate ggplot2 plotly Rdimtools shiny tourr]; }; spinyReg = derive2 { name="spinyReg"; version="0.1-0"; sha256="0kbg7rncrrl5xdsaw9vj909x97mfp77mjnvghczplmnwmmanyn72"; depends=[]; }; spiritR = derive2 { name="spiritR"; version="0.1.1"; sha256="1fjr63rl9hwqxzgm4lkb9v74cxxpi4lrlcgjixdm7zgccm8ihdvh"; depends=[httr magrittr xml2]; }; - splancs = derive2 { name="splancs"; version="2.01-40"; sha256="0qs3lwyllrkahnvqbm8bzrf03bm9zk4s7p1n19s638y4xf0l6x3r"; depends=[sp]; }; + splancs = derive2 { name="splancs"; version="2.01-42"; sha256="1aph5rns5kzad1vc6y7khs3y8ysf51fgssmskmi0pqi18mvg82lc"; depends=[sp]; }; splashr = derive2 { name="splashr"; version="0.6.0"; sha256="0l57w5gwr0p2049z1201nlqsy23h37gsybd1lj3vycxz43ir7213"; depends=[curl dplyr formatR HARtools httr jsonlite lubridate magick openssl purrr scales stevedore stringi xml2]; }; - splines2 = derive2 { name="splines2"; version="0.3.1"; sha256="03zh3v8z0030ivja4a08f0rrkn6k5g5kyaqnys81h3wja10gllyv"; depends=[Rcpp RcppArmadillo]; }; + splines2 = derive2 { name="splines2"; version="0.4.3"; sha256="1wjfj16dasjrla21f3jpbbvnvf1hac2zkvp75wh0xgkm1nq3pl4i"; depends=[Rcpp RcppArmadillo]; }; splinetree = derive2 { name="splinetree"; version="0.2.0"; sha256="0gqb3kwca42crrx6fj42ryl5pkxvankhp1chdlvi5lgg8mzmqsnl"; depends=[ggplot2 mclust mosaic nlme rpart treeClust]; }; splitFeas = derive2 { name="splitFeas"; version="0.1.0"; sha256="1cfiis32h5kkp8r1mndmj4xss9gw96vdzk7q68q3jhbwqiaxp9rp"; depends=[corpcor matrixStats]; }; splitSelect = derive2 { name="splitSelect"; version="1.0.1"; sha256="0pkiarjwjw8s3rspj2910lwrcy71qjx1i2fp1q98k05b39v8m5da"; depends=[caret doParallel foreach glmnet multicool]; }; splitTools = derive2 { name="splitTools"; version="0.3.1"; sha256="015vk8awxfc3zmcm3h51b6fy7si31g8w7mg4ig5fvpgsnm97h7rw"; depends=[]; }; splitfngr = derive2 { name="splitfngr"; version="0.1.2"; sha256="0cf9y68m72j890a732m0n784nr12ydljr6s8i80f0in6q8lmw8ls"; depends=[lbfgs]; }; - splithalf = derive2 { name="splithalf"; version="0.7.1"; sha256="0mpg6i6zh4s9sz10gs0h3y1cc1zva7vs805sb3qkghx857psgyw3"; depends=[dplyr ggplot2 patchwork plyr Rcpp robustbase tidyr]; }; - splithalfr = derive2 { name="splithalfr"; version="2.0.12"; sha256="0xcd0zjm8nvj1vq241m2y9gdygiwi0mzvyh4znq7biviwfkya3ag"; depends=[bcaboot dplyr psych rlang tibble]; }; + splithalf = derive2 { name="splithalf"; version="0.7.2"; sha256="1b66dssjjs3j7wvjx12ql1iavfllh366cb5kbf5scxg882zjdi0l"; depends=[dplyr ggplot2 patchwork plyr Rcpp robustbase tidyr]; }; + splithalfr = derive2 { name="splithalfr"; version="2.1.0"; sha256="1dk85p2b6yxf9n5abn00zv5zvcgwhz20zyls5vg80jfg9xkr4ar6"; depends=[bcaboot dplyr psych rlang tibble]; }; splitstackshape = derive2 { name="splitstackshape"; version="1.4.8"; sha256="0mpyf2kkfdl69pdc6brl1r6101vyc6pgr7z17s55ppg3y71k4q35"; depends=[data_table]; }; splm = derive2 { name="splm"; version="1.4-11"; sha256="15app94mxs6xlmqqhpa0q041skc4n4l2wfi6pmmhwinrgcqgncln"; depends=[bdsmatrix ibdreg MASS Matrix maxLik nlme plm spam spdep]; }; splmm = derive2 { name="splmm"; version="1.1.2"; sha256="1ch9nm6h2l4s90dz0a8j6w77i1di5sf0glwayi84nanxad9q09i2"; depends=[emulator ggplot2 gridExtra MASS miscTools penalized plot3D Rcpp RcppArmadillo]; }; splot = derive2 { name="splot"; version="0.5.1"; sha256="0m2cx5rrwfyznzn12z9xkyrs9i6qkwyyymbk3z28gjxw31kszlc9"; depends=[]; }; spls = derive2 { name="spls"; version="2.2-3"; sha256="0bmb0ai5z80njhypd342i711x0bdkwcvlyn374lyyzj8h3d97mmv"; depends=[MASS nnet pls]; }; - splus2R = derive2 { name="splus2R"; version="1.2-2"; sha256="0xrbj8vxy0pc6hl7m8abv71d3hjw47cl51s7j7priadyqczkq6sz"; depends=[]; }; - splusTimeDate = derive2 { name="splusTimeDate"; version="2.5.0-142"; sha256="0l1cb6gvwysca5psnsppllsvmsq7gfrybxy7aiw7phnm6bhb4w67"; depends=[]; }; - splusTimeSeries = derive2 { name="splusTimeSeries"; version="1.5.0-75"; sha256="14bg0yzwk3v0b1qrlfaxv48dpk380ha6wb2w4k02c9vmb51ysmw0"; depends=[splusTimeDate]; }; + splus2R = derive2 { name="splus2R"; version="1.3-3"; sha256="035zd22zcpkh74rik9ws6g8al6vjz7jgrqs5si361bzb5n290p3x"; depends=[]; }; + splusTimeDate = derive2 { name="splusTimeDate"; version="2.5.2"; sha256="06r2px2nsqyvjb1r1gz6wwjyr6rmfzslyxng8ng2n7hwr9ga1kc8"; depends=[]; }; + splusTimeSeries = derive2 { name="splusTimeSeries"; version="1.5.2"; sha256="0z064svaggqajqv8bni4763llkhm2s3s45krvs4w8k8all0h7rxa"; depends=[splusTimeDate]; }; spm = derive2 { name="spm"; version="1.2.0"; sha256="0kn3ahhvpcr0qpsqid4d7rx613a9dpdw2x4zgrnmsimmw026q7xn"; depends=[biomod2 gbm gstat psy randomForest ranger sp]; }; - spm12r = derive2 { name="spm12r"; version="2.8.1"; sha256="1ndak1ba6gh3hij0x4njr4hv6nfvq91dpgb0zdw0nl11bi6999b0"; depends=[git2r matlabr neurobase oro_nifti R_utils]; }; - spmoran = derive2 { name="spmoran"; version="0.2.0-2"; sha256="1zypgvm5ihpjbirfyksp5sm8g2hh24psyz6ylbg36ar57wif67zc"; depends=[doParallel fields foreach ggplot2 Matrix rARPACK RColorBrewer sp spdep vegan]; }; + spm12r = derive2 { name="spm12r"; version="2.8.3"; sha256="04bv4x7p2vv9n8zi5axpkcj13h6q08lc6qyd1czvxrpdmzsp40yb"; depends=[git2r matlabr neurobase oro_nifti R_utils]; }; + spmoran = derive2 { name="spmoran"; version="0.2.1"; sha256="04vk127bkvnfgk1ana58f88qiib3b4h6zdpsl3wqr3i8qsv0dapj"; depends=[doParallel fields foreach ggplot2 Matrix rARPACK RColorBrewer sp spdep vegan]; }; spnet = derive2 { name="spnet"; version="0.9.1-0"; sha256="1fy0fpgz2k985brfqyza1l49y0w2j9z308n542pgmkzqsnsdscpw"; depends=[shape sp]; }; spnn = derive2 { name="spnn"; version="1.2.1"; sha256="1yj89j7nynfyw1ikm6q5kdwdgiiwxx0aa6kgnri5wfnb4l0356l7"; depends=[MASS Rcpp RcppArmadillo]; }; - spocc = derive2 { name="spocc"; version="1.1.0"; sha256="1g7rfnzv38g8x57bzfd6z8q9gzcqci7l4srjmax0m1m3n3m73q5k"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble whisker wicket]; }; + spocc = derive2 { name="spocc"; version="1.2.0"; sha256="114xlwd9200ysgkcwxgjc5awj50j4k4v1lgbdjzs7gv9bvdlbb2b"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble wellknown whisker]; }; spongebob = derive2 { name="spongebob"; version="0.4.0"; sha256="1ar5173fwx1am5rgjlnczfla6b49g0azl0h9vn89ipw7f71rr5j7"; depends=[]; }; spongecake = derive2 { name="spongecake"; version="0.1.2"; sha256="13fxizbfjvqkhkmxk5bwv2fj2xyjkbxrxicpdgwpg0wsk4dhj3s8"; depends=[ggplot2 jpeg magrittr plyr]; }; - spork = derive2 { name="spork"; version="0.1.6"; sha256="0yih4cl118fkx19l4nbc6bicnpk9nkyfjnmq4ynda5bh8mbybdwm"; depends=[ggplot2 latexpdf png]; }; - sporm = derive2 { name="sporm"; version="1.1"; sha256="07sxz62h4jb7xlqg08sj4wpx121n9jfk65196mnxdvb36lqmb4hp"; depends=[]; }; + spork = derive2 { name="spork"; version="0.1.8"; sha256="1122fqq0nppxjjfjln7cr6ybrvg38rw6y4rc6vngrqjs5302rynl"; depends=[ggplot2 latexpdf png]; }; + sporm = derive2 { name="sporm"; version="1.1.1"; sha256="1bj795kmzjjcwvnrwg7dfz4jbfj488iydm0s79wrsgdq4chrrgyb"; depends=[]; }; sport = derive2 { name="sport"; version="0.2.0"; sha256="1wb28iaa35naf5aczijb5g0l41yf098f7c20mjmkcd5w04l1mmks"; depends=[data_table ggplot2 Rcpp]; }; - spotGUI = derive2 { name="spotGUI"; version="0.2.1"; sha256="1z664ricdsn8c29ks6hslm89f0qq6ls94pz4k256427cs95pk3ay"; depends=[gridExtra httpuv plotly rclipboard rhandsontable shiny shinyBS shinydashboard shinyjs smoof SPOT XML]; }; + sportyR = derive2 { name="sportyR"; version="1.0.1"; sha256="03l5zyqdrzji58acq5mmczz7nx9yk29hf5dzagpgb8fraq1vvddi"; depends=[dplyr ggplot2 glue]; }; + spotGUI = derive2 { name="spotGUI"; version="0.2.3"; sha256="0hybpw0lgqrzrryfp08qvl42hrgdmx2hq7bavxjihm8mp0375dmz"; depends=[batchtools gridExtra httpuv plotly rclipboard rhandsontable shiny shinyBS shinydashboard shinyFiles shinyjs smoof SPOT XML]; }; + spotidy = derive2 { name="spotidy"; version="0.1.0"; sha256="0hg8d3piiwp4q3257qsv5l41zc3c5a8mbq595ci63id8fc2q2pkd"; depends=[dplyr httr magrittr purrr]; }; + spotoroo = derive2 { name="spotoroo"; version="0.1.1"; sha256="0xh7fxkry63fm83vfc2njjzp4r6gb5b2242ima8q75mrvjc5biax"; depends=[cli dplyr geodist ggbeeswarm ggExtra ggplot2 ggrepel patchwork progress]; }; spp = derive2 { name="spp"; version="1.16.0"; sha256="08zxxgyp0h6733b08jmml7k4rhfd3mi5dda3jrzid0s184y0z29w"; depends=[BH caTools Rcpp Rsamtools]; }; - sppmix = derive2 { name="sppmix"; version="1.0.2.1"; sha256="0rgxaw7xqlrcmyq772afs2ymgbsc296g6c3jx9bi8hlfygb3lk09"; depends=[fields ggplot2 mvtnorm Rcpp RcppArmadillo rgl spatstat]; }; - spray = derive2 { name="spray"; version="1.0-10"; sha256="1iz704ym09rn3fdjymdmbiifvw5qn2bm50rmzxa8igkn66cgm163"; depends=[magic mathjaxr partitions Rcpp]; }; - spread = derive2 { name="spread"; version="2019.8.5"; sha256="1mc25abh1jxgis9p78pdy91a45kanr7y32xbqypyd514jjylnc52"; depends=[data_table fhidata Rcpp RcppProgress readxl stringr zoo]; }; + spray = derive2 { name="spray"; version="1.0-11"; sha256="0zg7rhsxbbrbvjv4azkyl9fd5kgh0a5xnkr9lnaqiss8z109jl6v"; depends=[magic mathjaxr partitions Rcpp]; }; spreadr = derive2 { name="spreadr"; version="0.1.0"; sha256="1azf1543ijlgmry0f2sxivpy4hk9mcwnn5kqggzwwzwla2ql3lhj"; depends=[extrafont ggplot2 igraph Rcpp]; }; sprex = derive2 { name="sprex"; version="1.4.1"; sha256="14idml4mipd4wyza7hqf49ww4dparmwaps35hxm8jg5h0w1pgh7j"; depends=[swfscMisc]; }; springer = derive2 { name="springer"; version="0.1.2"; sha256="0zzc8fmqjm6pjsfg4sxjzdal9yrs43l5kp1fbkyqrsvxpm6p8hki"; depends=[MASS Rcpp RcppArmadillo]; }; sprintr = derive2 { name="sprintr"; version="0.9.0"; sha256="0nnzjn7zrcgcmk3rs0hn56jcjrzrn5z0kc77bv4zzvbz5vr8gbwj"; depends=[glmnet Rcpp RcppArmadillo]; }; sprm = derive2 { name="sprm"; version="1.2.2"; sha256="0iyijkjnyz4yx2cmazlnhkk0f5ls0c2q2aikwlzl13w6zbj040a8"; depends=[cvTools ggplot2 pcaPP reshape2 robustbase]; }; sprsmdl = derive2 { name="sprsmdl"; version="0.1-0"; sha256="09klwsjp5w6p7dkn5ddmqp7m9a3zcmpr9vhcf00ynwyp1w7d26gi"; depends=[]; }; + spsComps = derive2 { name="spsComps"; version="0.2"; sha256="1gdcbqjyhph686iff952nxpldfp19lz6a9l4ksbyzi69mwdc8wab"; depends=[assertthat bsplus crayon dplyr glue htmltools magrittr R6 shiny shinyAce shinyFiles shinytoastr shinyWidgets spsUtil stringr vroom]; }; + spsUtil = derive2 { name="spsUtil"; version="0.1.0"; sha256="1b5lzsj6ax1mi8l42dqz91aljdzvjjw8n3vzx4m8ay9mym9l6dhx"; depends=[assertthat crayon glue httr magrittr stringr]; }; spsann = derive2 { name="spsann"; version="2.2.0"; sha256="00nlrwk50ch128brzvfxld0pcpq1syks9rvwdrcf1i2pcxnva7d0"; depends=[pedometrics Rcpp sp SpatialTools]; }; spselect = derive2 { name="spselect"; version="0.0.1"; sha256="02aiml4dh40n6yl52ypramn4847ykdi4y5lhsmchnnp4nnnqycsn"; depends=[magic pracma tester]; }; spsh = derive2 { name="spsh"; version="1.1.0"; sha256="1rmsgp0mrb4153v5f5xby7r3izvgz1a0vi63g5p9q5jd6z0gd2i1"; depends=[DEoptim FME hypergeo lhs pracma Rdpack]; }; spsi = derive2 { name="spsi"; version="0.1"; sha256="0q995hdp7knic6nca0kf5yzkvv8rsskisbzpkh9pijxjmp1wnjrx"; depends=[plot3D]; }; - spsur = derive2 { name="spsur"; version="1.0.1.6"; sha256="1dllgnv2javrbmy4a5cg4n0rmr6igalr2xza39bqv3817p0mpaal"; depends=[car Formula ggplot2 gmodels gridExtra knitr lmtest MASS Matrix minqa numDeriv Rdpack rlang rmarkdown sparseMVN spatialreg spdep]; }; + spsur = derive2 { name="spsur"; version="1.0.1.8"; sha256="085rxzspd0irg5jl10m1gin0dbfk4nyry81dhwn43icr44k9h810"; depends=[car Formula ggplot2 gmodels gridExtra knitr lmtest MASS Matrix minqa numDeriv Rdpack rlang rmarkdown sparseMVN spatialreg spdep]; }; spsurv = derive2 { name="spsurv"; version="1.0.0"; sha256="11jlbzvzxv3d1d0nwpbii46ddvphglrxv25rw7pvxbybcx2i7k6x"; depends=[BH coda loo MASS Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; spsurvey = derive2 { name="spsurvey"; version="4.1.4"; sha256="1dz6g0kb4gjsbkmj66926cxlfx7phx6mg483r0qz4wwmmba9qgbh"; depends=[crossdes deldir foreign Hmisc MASS rgeos sf sp]; }; spt = derive2 { name="spt"; version="2.5.1"; sha256="04j38d2b35p4798znnc49vqrg8r8bygwi07vybfj3nzimlp2mkrn"; depends=[]; }; @@ -15291,27 +15900,28 @@ in with self; { sqlutils = derive2 { name="sqlutils"; version="1.2"; sha256="0dq4idg8i4hv9xg8jllllizqf3s75pdfm1wgncdjj52xhxh169pf"; depends=[DBI roxygen2 stringr]; }; sqp = derive2 { name="sqp"; version="0.5"; sha256="0l01zwcryv5bmzmd98gj0m5ip8nvr8lziq1awvfif1bzwvvd2kzx"; depends=[Matrix Rcpp RcppArmadillo RcppEigen Rdpack]; }; squash = derive2 { name="squash"; version="1.0.9"; sha256="1x66iamj5pir6l9aqx4x7xylxxjpjrw8vcix9rbhfd0y0y2iqf7z"; depends=[]; }; - squashinformr = derive2 { name="squashinformr"; version="0.1.5"; sha256="0mj5xc9qsvzh08bxliipaj83wmxxgi6bgxl8x0bgink9s8s9g2ws"; depends=[dplyr Hmisc janitor lubridate naniar plyr polite rlang rvest stringr tibble tidyr xml2]; }; + squashinformr = derive2 { name="squashinformr"; version="0.2.2"; sha256="14ql4rajfis3cmb5yb83nb8mh1rwvw57kclkyc6ymszc791ij7wk"; depends=[dplyr Hmisc janitor lubridate naniar plyr polite rlang rvest stringr tibble tidyr]; }; squid = derive2 { name="squid"; version="0.1.2"; sha256="1sf7q9pp68inr4ikaxm51f31gwxq9ixrsismrnnsby3agq6nsmkb"; depends=[arm data_table ggplot2 lme4 MASS shiny]; }; sra = derive2 { name="sra"; version="0.1.3"; sha256="0bdxgsz177szfqmvffidgkhl0lrdd7c1nzdvh7ijx99zmi5ww71n"; depends=[]; }; srcr = derive2 { name="srcr"; version="1.0.0"; sha256="1wk18a1c0pf6mq3k78qi7fhivahx2q22rcs2ajsdj73b0993wnbm"; depends=[DBI dplyr jsonlite]; }; srm = derive2 { name="srm"; version="0.3-6"; sha256="0mc97pv1hsmia4v2wyb8yi37i3v1xypfv9xmhjb989xnnysf1lm3"; depends=[Rcpp RcppArmadillo]; }; srp = derive2 { name="srp"; version="1.2.0"; sha256="0xdzfvi7z78xmyxwd8fha3lr86jwmgjba1w8hhn4sv3v5gc9vlkh"; depends=[fda mgcv]; }; - srt = derive2 { name="srt"; version="1.0.0"; sha256="0mxmg0j1acfks6gdmb08jlf03qwmx7s5p5li4z7zq35g1wml8icf"; depends=[]; }; - srvyr = derive2 { name="srvyr"; version="1.0.0"; sha256="1p0185svcc71s2c00ym2vkml4mk9blpki5z9s4c06nzm7ylb1dmq"; depends=[dplyr magrittr rlang survey tibble tidyr tidyselect]; }; + srt = derive2 { name="srt"; version="1.0.2"; sha256="0fwazvjfi622vlvx0zn43inbj3f8xyl3n5rca31i80li6a9gw3n1"; depends=[]; }; + srvyr = derive2 { name="srvyr"; version="1.0.1"; sha256="0yvdxznfp1pfhg101rav0yzrcnjjani1d0c49r54cq1qabikkljx"; depends=[dplyr magrittr rlang survey tibble tidyr tidyselect]; }; ss3sim = derive2 { name="ss3sim"; version="1.0.3"; sha256="0s2yajlhi07fvqc0rr4msd9g2jrswb83dx55wsxnw925vikqa5kz"; depends=[bbmle foreach ggplot2 gtools r4ss]; }; ssMousetrack = derive2 { name="ssMousetrack"; version="1.1.5"; sha256="069jsp2l63jp4fv2hwadqxpkp89aqmbh439zy66rx55kws75b556"; depends=[BH CircStats cowplot dtw ggplot2 Rcpp RcppEigen rstan rstantools StanHeaders]; }; + ssaBSS = derive2 { name="ssaBSS"; version="0.1"; sha256="1gprl725am933fqlhhxzwrg7k08sy0xndmg8v8hifxfwq9nbk0w9"; depends=[BSSprep ggplot2 ICtest JADE tsBSS xts zoo]; }; ssanv = derive2 { name="ssanv"; version="1.1"; sha256="17a4a5azxm5h2vxia16frcwdyd36phpfm7fi40q6mnnrwbpkzsjd"; depends=[]; }; ssc = derive2 { name="ssc"; version="2.1-0"; sha256="1lq71p8hbjfg4a52009810k5dmhak9ddk1dywvhy7v2gjmxqnadw"; depends=[proxy]; }; sscor = derive2 { name="sscor"; version="0.2"; sha256="1kcrr90cxg6k4qkc3pidhkwf4dsnlgbxczxigr2afwpd9cpf104c"; depends=[mvtnorm pcaPP robustbase]; }; ssd = derive2 { name="ssd"; version="0.3"; sha256="1z61n9m6vn0ijawyz924ak0zfl9z13jsb4k4575b7c424ci2p6gy"; depends=[]; }; - ssdtools = derive2 { name="ssdtools"; version="0.3.2"; sha256="0m1qiba7byc5kvs4b57vkg6jr5ghllbpkg2pcybi9q3llhl4pxd3"; depends=[abind actuar chk fitdistrplus ggplot2 lifecycle Rcpp scales tibble VGAM]; }; + ssdtools = derive2 { name="ssdtools"; version="0.3.3"; sha256="1xvc4z2wy2jl7qj163lm6az8qh7by9dvs5raxf9sd95snn7x61ms"; depends=[abind actuar chk fitdistrplus ggplot2 lifecycle Rcpp scales tibble VGAM]; }; sse = derive2 { name="sse"; version="0.7-16"; sha256="1kxdgbskw7v48jnif4dpmwxpsdznfx8d9q5nkf3ynw9xl38rzv23"; depends=[lattice]; }; ssev = derive2 { name="ssev"; version="0.1.0"; sha256="1iw07gw9vhg073s5kkxh5f1si6p998rc1i2zglnpk5c3pi3l55wp"; depends=[MESS pwr]; }; ssfa = derive2 { name="ssfa"; version="1.1"; sha256="0fkyalhsjmx2sf8xxkppf4vd272n99nbkxh1scidrsgp4jk6z7fx"; depends=[Matrix maxLik sp spdep]; }; ssfit = derive2 { name="ssfit"; version="1.1"; sha256="1fais0msi2ppgfp0vbx3qri7s9zs51i7n90w36xkwwac4f46bq5y"; depends=[survey]; }; ssgraph = derive2 { name="ssgraph"; version="1.12"; sha256="0mcg8bzgx0376f72xxqmsfwmnmfk6lcmam19d28psr1sxnhngklj"; depends=[BDgraph]; }; - ssh = derive2 { name="ssh"; version="0.7.0"; sha256="0sbgscvy6j3i2ik0rfc8rp26widi1p533kr5iy0wic7qdwfcav9b"; depends=[askpass credentials]; }; + ssh = derive2 { name="ssh"; version="0.8.0"; sha256="0y9rrvn21mc9ivjlz6zmg5h282d2gycyjda8sh9k0gx0y4c2m30i"; depends=[askpass credentials]; }; ssh_utils = derive2 { name="ssh.utils"; version="1.0"; sha256="08313zzzgcyvzkrkq0w0yf748ya1a9shx5xnan5891v0lah9v0b1"; depends=[stringr]; }; ssize_fdr = derive2 { name="ssize.fdr"; version="1.2"; sha256="0y723lwsnmk3rxbhlsrny9hiy07a5p255ygy9qkj6mri64gk1hby"; depends=[]; }; ssizeRNA = derive2 { name="ssizeRNA"; version="1.3.2"; sha256="1qw10yswzpg28fhvr6rsq0gh7xivfapw64gxc0hakb1nc31jf8ky"; depends=[Biobase edgeR limma MASS qvalue ssize_fdr]; }; @@ -15331,53 +15941,55 @@ in with self; { st = derive2 { name="st"; version="1.2.6"; sha256="0v2bii21c0dg25zbf2379q7jy6z4z93hpw3rd32gm77bvgr0fd40"; depends=[corpcor fdrtool sda]; }; stR = derive2 { name="stR"; version="0.4"; sha256="120k8k1l8cfy8x746808jym7lnaplgh4s3lycgyq2wia2c35r0rc"; depends=[foreach forecast Matrix quantreg rgl SparseM]; }; stUPscales = derive2 { name="stUPscales"; version="1.0.3.4"; sha256="0a6b38lhi1p0n2hjq2j8aw2vkasdv50cpgllxfxla7ddwbhbk3nk"; depends=[data_table doParallel EmiStatR foreach ggplot2 hydroGOF lattice lmom mAr moments msm xts zoo]; }; - staRdom = derive2 { name="staRdom"; version="1.1.18"; sha256="1ywc8mp0j8fl3ki18sqjh9x582wza3l0ydfpfbx3vyzwqb9gdl2s"; depends=[cdom data_table doParallel dplyr drc eemR foreach GGally ggplot2 gtools matrixStats MBA multiway pracma R_matlab readr stringr tibble tidyr zoo]; }; + sta = derive2 { name="sta"; version="0.1.5"; sha256="0q9pplx4ifndvbh2bfa96vjbcaaqdj6bq57kwlzhavq6hjq7d56v"; depends=[doParallel foreach geoTS iterators mapview raster RColorBrewer rgdal trend]; }; + staRdom = derive2 { name="staRdom"; version="1.1.21"; sha256="1h7hakl8i1ry8rfx80na3qs0ryxr6cajh9szrb5rwww0ay43bswz"; depends=[askpass cdom data_table doParallel dplyr drc eemR foreach GGally ggplot2 gtools httr matrixStats MBA multiway pracma R_matlab readr stringr tibble tidyr zoo]; }; staTools = derive2 { name="staTools"; version="0.1.0"; sha256="1ksr0sjkhlwh0fkwcxjcxzbyxs1g78m4spkhrmgdpfzmk5zskqf9"; depends=[magicaxis Rcpp VGAM]; }; stability = derive2 { name="stability"; version="0.5.0"; sha256="0mz7ikfhpfbdcp72klq7fi4zfmx2w18gz46yhwywcc4dyi277m11"; depends=[dplyr ggfortify ggplot2 lme4 magrittr matrixStats reshape2 rlang scales tibble tidyr]; }; stable = derive2 { name="stable"; version="1.1.4"; sha256="01azqg4yi5wl6wfdpjq57w41x5z2b4dsp5n3vpkz24b9avk6rm8s"; depends=[rmutil stabledist]; }; stableGR = derive2 { name="stableGR"; version="1.0"; sha256="1glxrxqd3gr7npwlzcr2nmsmakydyxg7hswvb85gz1jvc6c6254f"; depends=[mcmcse mvtnorm]; }; stabledist = derive2 { name="stabledist"; version="0.7-1"; sha256="0scar396wiq6wkbkvwp4qrxqc1m075y56p37i6iry5rw796p1i86"; depends=[]; }; - stablelearner = derive2 { name="stablelearner"; version="0.1-2"; sha256="18yrx2h71b857j0xyh68pj80p2xk6yhbfzhd3mdhiqw0irmc5755"; depends=[e1071 MASS party partykit randomForest ranger]; }; + stablelearner = derive2 { name="stablelearner"; version="0.1-3"; sha256="0h2xqm9g4zx72r6r0a7if1kyrqrjr8hs1pi07h294hbg8l7yvhxb"; depends=[e1071 MASS party partykit randomForest ranger]; }; stablespec = derive2 { name="stablespec"; version="0.3.0"; sha256="0m143cq0baj2lyakhr31mqk2lg78jzpdlpv2bhwz6bzzip7mqi22"; depends=[foreach ggm graph matrixcalc nsga2R polycor Rgraphviz sem]; }; - stabm = derive2 { name="stabm"; version="1.1.4"; sha256="1nav5v36q7fsqzqx61n1pfixwhkh12jxl9pfd4ssmsglxk8py0is"; depends=[checkmate Matrix]; }; + stabm = derive2 { name="stabm"; version="1.2.1"; sha256="0x8dbafwfpi3r5rzqn34257g9vz4b01gijxvvfch1dn13pm4vcmr"; depends=[checkmate Matrix]; }; stabreg = derive2 { name="stabreg"; version="0.1.2"; sha256="1jrxyv0d33vd9vdlj1cv1a2qdz8iqgr726f54dgazwsz3cpyy2ia"; depends=[numDeriv]; }; - stabs = derive2 { name="stabs"; version="0.6-3"; sha256="17sa0sjxf6h7gx1ga1pxhv17yrz3qisaivbf5cbc3asvshhswqg9"; depends=[]; }; + stabs = derive2 { name="stabs"; version="0.6-4"; sha256="1nf1yg14cgxrs4np1yghpzw1nczaslfv3rvf3918wrlzg0vp6l7q"; depends=[]; }; stackoverflow = derive2 { name="stackoverflow"; version="0.7.0"; sha256="0zv8bxzw4pgaa5ra8wsb9p7g8bwffdhc6gqsfrcs61zva7v9izc2"; depends=[]; }; - stacks = derive2 { name="stacks"; version="0.1.0"; sha256="0ssc8l4cgwfz0h1aavak9gpy7g85pnwjdzvfr76hmnqn39k09cpi"; depends=[butcher cli dials digest dplyr foreach generics ggplot2 glmnet glue parsnip purrr recipes rlang rsample tibble tidyr tune workflows yardstick]; }; + stacks = derive2 { name="stacks"; version="0.2.0"; sha256="1pb7p2ssr0878c5mn4fcxvdv60jafg85772spqh88b68dsbschhj"; depends=[butcher cli dials dplyr foreach generics ggplot2 glmnet glue parsnip purrr recipes rlang rsample tibble tidyr tune workflows workflowsets yardstick]; }; stacomirtools = derive2 { name="stacomirtools"; version="0.5.3"; sha256="00zpsfrw0gcjbjr3xdxf2wacrr1zfw6wq7a2ycq32pbh2smbkz4k"; depends=[RODBC xtable]; }; stagePop = derive2 { name="stagePop"; version="1.1-1"; sha256="0949r5ibl3sb10sr5xsswxap3wd824riglrylk7fx43ynsv5hzpy"; depends=[deSolve PBSddesolve]; }; - stagedtrees = derive2 { name="stagedtrees"; version="2.0.1"; sha256="0mpcmmdq907zapk6swdqx0nak2ms292x85n634zilnqjysjiz8zx"; depends=[]; }; + stagedtrees = derive2 { name="stagedtrees"; version="2.1.0"; sha256="05i2v6wxw79q9h31rfy53lgi23a7k0vlp7rmxfv5v3zdbvyfy8ja"; depends=[]; }; stam = derive2 { name="stam"; version="0.0-1"; sha256="1x1j45fir64kffny0nssb2hwn4rcp8gd2cjv6fw4yy0l4d0xi5iv"; depends=[np sp]; }; stampr = derive2 { name="stampr"; version="0.2"; sha256="10mc71kgnw5712q2gvzd4bmjaw1879r7s599hfsjap21idqb2k2m"; depends=[deldir maptools raster rgdal rgeos sp spdep]; }; - standardize = derive2 { name="standardize"; version="0.2.1"; sha256="0ijyqy09fl478cvqnqwv7fpdmf2yvihw18abkkmgwdnm2v3xqphp"; depends=[lme4 MASS stringr]; }; + standardize = derive2 { name="standardize"; version="0.2.2"; sha256="008nz9vf08qxwdsn373yzpmsw5lhbm6mpm6dlwyys58wq0bdvh28"; depends=[lme4 MASS stringr]; }; stapler = derive2 { name="stapler"; version="0.7.1"; sha256="1bzhahn72fzm2bjpis76hphv8whnkp2jq8bm1qldadhng4z1nsak"; depends=[matrixStats RNifti]; }; - staplr = derive2 { name="staplr"; version="3.1.0"; sha256="1annzkyrps0z2d0z9zyf76d936g26ypwakwh9cshjvfa07fqgjvy"; depends=[assertthat glue rJava stringr XML]; }; + staplr = derive2 { name="staplr"; version="3.1.1"; sha256="0g3a13qndi4w35wq9bm0gb2b8v9svih9gbj5ymggqlcwz1dzywga"; depends=[assertthat glue rJava stringr XML]; }; stargazer = derive2 { name="stargazer"; version="5.2.2"; sha256="1pij76r60hkjlvxw6zw1v7gkib81smiqmjq7mwszn6xclq9lmsvh"; depends=[]; }; starm = derive2 { name="starm"; version="0.1.0"; sha256="0y580c6inmfix6agwd5nr340l3hjk2xxs95s468j5pghpjpb8rmv"; depends=[Matrix]; }; starma = derive2 { name="starma"; version="1.3"; sha256="07r0kyabhgbm2v39fcrw0qhxcxj9a9cb45g9chzcnn9qmvramcwx"; depends=[ggplot2 Rcpp RcppArmadillo scales]; }; starnet = derive2 { name="starnet"; version="0.0.6"; sha256="0gbg8svyj4nh846q7986ap7jjry599kb1348k9lifz19kvyr4rn4"; depends=[cornet glmnet Matrix survival]; }; - stars = derive2 { name="stars"; version="0.4-3"; sha256="0yf2x8l3bybc91r9vih473qrsqf05p6gszsr41ms63hksig8vwx2"; depends=[abind classInt lwgeom rlang sf units]; }; - starsExtra = derive2 { name="starsExtra"; version="0.2.0"; sha256="07aw0f5jnhmz3zmcnyry1g2gxds7lghwzqfpmdzzid2wmdcd5raw"; depends=[mgcv nngeo sf stars units]; }; + stars = derive2 { name="stars"; version="0.5-2"; sha256="0w2svw02ywvclq0nsnjns1n0rfr54q7x30y64y14n7zfr969ly1n"; depends=[abind classInt lwgeom rlang sf units]; }; + starsExtra = derive2 { name="starsExtra"; version="0.2.4"; sha256="0dpcr7p8ss29rxknzzhsa1hl72lky8ii6wnyialydb9d051d019q"; depends=[mgcv nngeo sf stars units]; }; starschemar = derive2 { name="starschemar"; version="1.2.0"; sha256="0jjaic1zwdc3lvdlgs0vzkjjivjs2dskmhx4qg469ban34az0591"; depends=[dplyr generics pander purrr readr rlang snakecase tibble tidyr tidyselect]; }; startR = derive2 { name="startR"; version="2.1.0"; sha256="1cgn77jaiy7gfqbhh6w3x0bf57v32vzpp334mp50v827hgv439wy"; depends=[abind bigmemory ClimProjDiags easyNCDF future multiApply s2dverification]; }; startup = derive2 { name="startup"; version="0.15.0"; sha256="05a5drjzmc969yn5y62gy1ja469nqrcbicycvjmlgrrfcj7918mi"; depends=[]; }; startupmsg = derive2 { name="startupmsg"; version="0.9.6"; sha256="0vkqxir4ady4dn9s70dfg1fxck2xg8vnmrmxjzvk01i6pc9zyq0x"; depends=[]; }; - starvars = derive2 { name="starvars"; version="1.1.1"; sha256="0gam30mjppzq5pw7899ppc60ia47y0wh9y6j3p37511h691l45v5"; depends=[data_table fGarch ks lessR lubridate MASS matrixcalc maxLik quantmod rlist vars xts zoo]; }; - starvz = derive2 { name="starvz"; version="0.4.0"; sha256="1nzfpvdvfsi4a4x667k74l9c8nbsvwdgyn6ipsdr7n30k2sxlm6k"; depends=[arrow BH car data_tree dplyr ggplot2 gtools lpSolve magrittr patchwork purrr RColorBrewer Rcpp readr rlang stringr tibble tidyr yaml zoo]; }; + starvars = derive2 { name="starvars"; version="1.1.2"; sha256="1pxj8idzacbvbyy0p1p44if2np1cq9kz9zvqbr4r3ip1vdscgkqf"; depends=[data_table dplyr fGarch ks lessR lubridate MASS matrixcalc maxLik quantmod rlist vars xts zoo]; }; + starvz = derive2 { name="starvz"; version="0.5.0"; sha256="0q8y6s224jmj4hzdd7cn0s7yrckdxgv1kqlv4hbq8d7743s0c8gw"; depends=[arrow BH car data_tree dplyr flexmix ggplot2 gtools lpSolve magrittr patchwork purrr RColorBrewer Rcpp readr rlang stringr tibble tidyr yaml zoo]; }; starwarsdb = derive2 { name="starwarsdb"; version="0.1.2"; sha256="00n9qqw4lbfk698qgvw8i42sy3dv5i5fiiqma3zks4rr9yspkldq"; depends=[DBI duckdb magrittr tibble]; }; stat_extend = derive2 { name="stat.extend"; version="0.1.4"; sha256="1m3bjwgb0g0c445xy9b29yibnf8ldjfnyd0i519dxnh31b6k8vy9"; depends=[sets]; }; statGraph = derive2 { name="statGraph"; version="0.4.1"; sha256="1svsjdh7w1gb37frn2y2rvkrldcm1nws6xhl18bxpx0g29z4915r"; depends=[cluster doParallel foreach igraph MASS rARPACK]; }; statVisual = derive2 { name="statVisual"; version="1.2.1"; sha256="1cc9p9g8lzn0lgh793r977yhqbk89l74m443gnznjlfml69bfb21"; depends=[Biobase dplyr factoextra forestplot gbm GGally ggdendro ggfortify ggplot2 ggrepel glmnet gridExtra knitr limma magrittr pheatmap pROC pvca randomForest RColorBrewer reshape2 rmarkdown rpart_plot tibble tidyverse]; }; statar = derive2 { name="statar"; version="0.7.3"; sha256="17zg1g0ndsysrqj0alpx0sgmc69d3jkqr543l8m758mnm9bw83c9"; depends=[data_table dplyr ggplot2 lazyeval matrixStats rlang stringr tidyselect]; }; - statcanR = derive2 { name="statcanR"; version="0.1.0"; sha256="1pyax5lixbpdg99n525w9z44s0zp5xda6ad605c3id0arki9c8xq"; depends=[curl data_table]; }; + statcanR = derive2 { name="statcanR"; version="0.2.1"; sha256="12b78n88dmpk6lfw83dwhnvx98wjry4ykyamgbb96l2mrpwbabng"; depends=[curl data_table]; }; statcheck = derive2 { name="statcheck"; version="1.3.0"; sha256="0ivybdcrymlsfv6pg6p5bv70qdvgxf2vgp0kf4r0pf2fcvav1mcp"; depends=[ggplot2 plyr rmarkdown]; }; statcomp = derive2 { name="statcomp"; version="0.1.0"; sha256="0793k14rxiwq98zlrbsmbbkjn5z2ny5c90pia7cx3s77a3wdc96l"; depends=[Matrix zoo]; }; statebins = derive2 { name="statebins"; version="1.4.0"; sha256="1v67da939qg672aqni2i37w70pgasgx6r55b4fjjc3zzviq8gipx"; depends=[ggplot2 scales]; }; - states = derive2 { name="states"; version="0.3.0"; sha256="1lajcp8y483kx6iaxydrjyi2ngvw91203901xs9ndqdwm1x2m5bd"; depends=[dplyr lifecycle rlang]; }; + states = derive2 { name="states"; version="0.3.1"; sha256="1yi7yigmxjcpa2p75bq0jj1pmiv5xh6zsxhayg7pa7p7fqdl3d9i"; depends=[dplyr lifecycle rlang]; }; statespacer = derive2 { name="statespacer"; version="0.4.0"; sha256="06qjbnp40mkbjxq14cwzpwcqymafm14cli1kmjfqwl4g1v9bvsx3"; depends=[Rcpp RcppArmadillo Rdpack]; }; statgenGWAS = derive2 { name="statgenGWAS"; version="1.0.5"; sha256="1faxc4nd4ldslb47vsz8aw31c8f9fvmaacbq1zwc23dvqnrvzawn"; depends=[data_table ggplot2 Rcpp RcppArmadillo sommer]; }; - statgenGxE = derive2 { name="statgenGxE"; version="1.0.3"; sha256="05886glxnfmiqiz7aycjb9j20i6aqxam69nsamb3awy477cyjj3x"; depends=[emmeans ggplot2 gridExtra knitr lme4 statgenSTA xtable]; }; - statgenSTA = derive2 { name="statgenSTA"; version="1.0.6"; sha256="1hbhy4x5mfrm8wdvzm2fw5ii8yi0iw0nmsfk8wbdx1c40sfm5k15"; depends=[emmeans ggplot2 ggrepel gridExtra knitr lme4 mapproj maps qtl scales SpATS xtable]; }; + statgenGxE = derive2 { name="statgenGxE"; version="1.0.4"; sha256="12v9a1lg12pmhzk28c929j1vhhh5x9gzb6ia9izvji2zjx2yigk4"; depends=[emmeans ggplot2 gridExtra knitr lme4 statgenSTA xtable]; }; + statgenHTP = derive2 { name="statgenHTP"; version="1.0.1"; sha256="18jcjq7v4xmkx824l74a8g19gxr3pcmvgvh6zlq0jx7j2d4ccwlf"; depends=[animation factoextra ggforce ggplot2 gridExtra locfit lubridate reshape2 scales SpATS]; }; + statgenSTA = derive2 { name="statgenSTA"; version="1.0.7"; sha256="07qj9cnwpv946zgp1w3ipxr6vna8kxhk0nlz6zq2awc7qpnda4cr"; depends=[emmeans ggplot2 ggrepel gridExtra knitr lme4 mapproj maps qtl scales SpATS xtable]; }; stationaRy = derive2 { name="stationaRy"; version="0.5.1"; sha256="1620fdlybn3hr96yngnp802imr9b7n90835lyyd86r2wn6psdzvl"; depends=[downloader dplyr lubridate lutz magrittr progress readr stringr tidyr]; }; stationery = derive2 { name="stationery"; version="0.98.30"; sha256="0gr4nja8xsajrx34m6cxpw3jc59flh7n5d3x111znajfwbym1b5n"; depends=[knitr kutils rmarkdown]; }; statip = derive2 { name="statip"; version="0.2.3"; sha256="0kymc3ds1nx0h11ffmm3vmqr1w34gd0k788vf72x2v45h8c1ma2n"; depends=[clue rpart]; }; @@ -15388,66 +16000,69 @@ in with self; { statnipokladna = derive2 { name="statnipokladna"; version="0.6.0"; sha256="01rh2ihh0cc7fnda1h3bk75n0f4939480l6d6vhl6x8nrfk4hhw4"; depends=[curl dplyr httr jsonlite lifecycle lubridate magrittr purrr readr rlang stringi stringr tibble tidyr usethis xml2]; }; statprograms = derive2 { name="statprograms"; version="0.2.0"; sha256="0m7px7fmpz2zzlfdi7rbllcjvcjp8iy94f6fa1w4xinh7vz3y6vq"; depends=[]; }; statquotes = derive2 { name="statquotes"; version="0.2.2"; sha256="1xzc3ndddjrlyld0p4zcwwxkj7i3m3adj7c78x9l4lhlw9mxbbqg"; depends=[stringr tidytext wordcloud]; }; - stats19 = derive2 { name="stats19"; version="1.3.0"; sha256="1h6sgbi23qq4shlbx7f4s2yk4hmwvnb1z198k02j9a3n6dbdz7r7"; depends=[readr sf]; }; - statsExpressions = derive2 { name="statsExpressions"; version="0.6.2"; sha256="1rs86ncp1k4568rl8bxz0wzr571l6kx3f2l31a4xfhbp6mgg1fzm"; depends=[correlation dplyr effectsize ez ipmisc metafor metaplus parameters performance rcompanion rlang tidyBF tidyr WRS2]; }; - statsguRu = derive2 { name="statsguRu"; version="0.1.0"; sha256="0pqz0la86mk6zp65zzbfwhxyrqqx040p8mrm2j9wqb53r8fbnmqc"; depends=[devtools htmltab plotrix]; }; - statsr = derive2 { name="statsr"; version="0.2.0"; sha256="0xqwg519vd06d541jl3k3d6svfd623xz1z2cnrczpm99ql20q83m"; depends=[broom cubature dplyr ggplot2 gridExtra knitr rmarkdown shiny tibble tidyr]; }; - statswalesr = derive2 { name="statswalesr"; version="0.1.1"; sha256="0nawvavmi2d8ag8s6jhkdyykvrs3w5xnjrhk8rnlwcl1ms7ciw08"; depends=[curl dplyr httr jsonlite rlang]; }; + stats19 = derive2 { name="stats19"; version="1.4.1"; sha256="1hxxbmaycirzlf8mpsrk89g1ar0ky4vlhblnlxdkhd81ikas2laj"; depends=[readr sf]; }; + statsExpressions = derive2 { name="statsExpressions"; version="1.0.1"; sha256="0db3r9gybldd1lsyckd9p54bi1k9w18amgambgfx0qvqrfx637pf"; depends=[BayesFactor correlation dplyr effectsize insight ipmisc parameters performance rlang tidyr WRS2]; }; + statsr = derive2 { name="statsr"; version="0.3.0"; sha256="138yjifz8q3dqcm3wbzn4sxdydwnqvwkz0h20r8ls3pijqh6fc2y"; depends=[BayesFactor broom cubature dplyr ggplot2 gridExtra knitr rmarkdown shiny tibble tidyr]; }; + statswalesr = derive2 { name="statswalesr"; version="0.1.2"; sha256="0j6xv7cb2lnyw7ac86cmry9x7s0nynnpl3ibi592qmx4mhcfm5fc"; depends=[curl dplyr httr jsonlite rlang]; }; stcos = derive2 { name="stcos"; version="0.3.0"; sha256="0niy8inajs0vafbh47w5rajlp3bvgi9yakhyabjdrqhkjzs79lpx"; depends=[dplyr Matrix Rcpp RcppArmadillo sf]; }; stcov = derive2 { name="stcov"; version="0.1.0"; sha256="166w929sgd7nanw1zjhzwv50hd5vqhgsrgxnsga4dzrcvndalw70"; depends=[]; }; stdReg = derive2 { name="stdReg"; version="3.4.0"; sha256="003lp8yshjdql475hdpickwr0fngzn9qps1dzvx8zfy4x51xy8xl"; depends=[data_table drgee numDeriv survival]; }; stddiff = derive2 { name="stddiff"; version="3.0"; sha256="1z6rdchf46aaq0z9bp4dlc4h3swrgyjfdvg40f4lkyg5sgs4sliy"; depends=[]; }; stdvectors = derive2 { name="stdvectors"; version="0.0.5"; sha256="0gxylknr146qyg9aj22md076cdhrsz75dg25a1hx8525cm71nwd6"; depends=[Rcpp]; }; steadyICA = derive2 { name="steadyICA"; version="1.0"; sha256="0mcalbsgajdpk45k9vpyavn079063hw4ihkw72n9wcy5nb0da14g"; depends=[clue combinat MASS Rcpp]; }; - steemr = derive2 { name="steemr"; version="0.1.3"; sha256="18q853jmnxir9zcyb6009p2b246v1bi5fy1mcxd0fhbhxvs3s8rx"; depends=[beginr blogdown data_table ggplot2 htmltab httr knitr lattice latticeExtra lubridate mongolite openair plyr purrr RColorBrewer RCurl rjson rlist RODBC shiny stringi stringr tm VennDiagram wordcloud XML zoo]; }; steepness = derive2 { name="steepness"; version="0.2-2"; sha256="0bw7wm7n2xspkmj90qsjfssnig683s3qwg1ndkq2aw3f6clh4ilm"; depends=[]; }; stellaR = derive2 { name="stellaR"; version="0.3-3"; sha256="098sz6b8pl3fyca3g6myp97nna368xhxf8krmibadnnsr49q5zs9"; depends=[]; }; stemmatology = derive2 { name="stemmatology"; version="0.3.2"; sha256="1l2y4jlszz1dnafdl2wqqfgdjis07i3gzfnp1v1af32pvjy4zqhw"; depends=[cluster igraph xml2]; }; + stencilaschema = derive2 { name="stencilaschema"; version="1.0.0"; sha256="117vl2h78ndnb70s8mpd0bs1n6h1vizv4wzn6g4y9j12ma63nldb"; depends=[]; }; stepPenal = derive2 { name="stepPenal"; version="0.2"; sha256="08gizl6c606ibbv7x2rdvfw37rghkrprwszha79yngkzpajw8gql"; depends=[caret dfoptim glmnet mvtnorm pROC]; }; stepPlr = derive2 { name="stepPlr"; version="0.93"; sha256="1i54nyz8z5vq3mzfh6h2vd1q0hsdazc4mhrj9ad0zdvn0qnz61lv"; depends=[]; }; stepR = derive2 { name="stepR"; version="2.1-1"; sha256="0mz88d7214g59nvr40c4gf4grq9skjqqlfgydbdzmc4l315nr4zv"; depends=[digest lowpassFilter R_cache Rcpp]; }; - stepp = derive2 { name="stepp"; version="3.2.0.0"; sha256="0fnjqbncadscv6ryvqyqf8qqgpfzh2hka5ld2zvw39mjqzy5gadi"; depends=[car survival]; }; - steps = derive2 { name="steps"; version="1.1.0"; sha256="1p01cmvh5rbgwaz0r73iry60jq0f8rp3z8ql57vhmnd9kyrzf53m"; depends=[future future_apply memuse raster rasterVis Rcpp viridisLite]; }; - stevedata = derive2 { name="stevedata"; version="0.2.0"; sha256="0w8p4w2dr7bz3253n6an7a5dzj8wkw31qw0si3j3bb1jz64d3p97"; depends=[]; }; + stepp = derive2 { name="stepp"; version="3.2.2"; sha256="1iyj1f9gzn44xllhm9y1j0ynfz4q48d2l8ic4mjvzc3p4z8cnpmz"; depends=[car rstudioapi scales survival]; }; + steps = derive2 { name="steps"; version="1.2.1"; sha256="04n5m7a5yp3karhiwgcl6fzfp85iad2xymdwp1kyqbagx2acyrka"; depends=[future future_apply memuse raster rasterVis Rcpp viridisLite]; }; + stevedata = derive2 { name="stevedata"; version="0.4.0"; sha256="0ccss7wgmqjwk1h1piy5zlzsk660x7d7hf557q39ds850hfp4hzs"; depends=[]; }; stevedore = derive2 { name="stevedore"; version="0.9.3"; sha256="00zs2bl5h40rwbhnynjw2jbxlixjnk14rxn9chypqg5zgx9pqg2s"; depends=[crayon curl jsonlite yaml]; }; - stevetemplates = derive2 { name="stevetemplates"; version="0.2.0"; sha256="1mdcjvasz385chsg27nq96621c5hiaisypf24xpy3q693r0bs0nd"; depends=[rmarkdown]; }; + stevemisc = derive2 { name="stevemisc"; version="1.0.0"; sha256="0v654cc0czq128m52zjj7y1jv3xyyvbc6gw2fx2m1bznz5xlgxk8"; depends=[arm broom_mixed DBI dbplyr dplyr forcats ggplot2 labelled lme4 magrittr purrr rlang RSQLite tibble]; }; + stevetemplates = derive2 { name="stevetemplates"; version="0.5.0"; sha256="1a350j9wsf2l63hk78msf4y8kk54466kg0j3dcsqhp1dlvbqdbik"; depends=[rmarkdown]; }; stfit = derive2 { name="stfit"; version="0.99.8"; sha256="0js09v04ik5m3d9iz9waq0yigvg2g6n75m4zm5dc0nz3yr1irb88"; depends=[abind doParallel fda foreach Matrix raster rasterVis RColorBrewer Rcpp]; }; stickr = derive2 { name="stickr"; version="0.3.1"; sha256="0krz123vz4bdcdi4p27r637pgz4rcj6kmyiqdf5x69riddvfxx8r"; depends=[base64enc fs gh stringr]; }; sticky = derive2 { name="sticky"; version="0.5.6.1"; sha256="1szfpay9cpdwq6v5fmnjyr00r4zhz6zd2rrl3h88v9l5xpfafi4w"; depends=[]; }; stilt = derive2 { name="stilt"; version="1.3.0"; sha256="0b1bs849hw2wcvaldybxk8h8wgwl6p7x4i7winncvngmhplgrvx4"; depends=[fields]; }; stima = derive2 { name="stima"; version="1.2.1"; sha256="091pjjr2pvd93l01szyj5gr9ixv1h90yd18h678nhpn0fncimszv"; depends=[rpart]; }; stinepack = derive2 { name="stinepack"; version="1.4"; sha256="0crl77gr4x2bz2zp0a0lqiw5iqlrcx7vj67igkbzg64d1fxai85d"; depends=[]; }; + stlELM = derive2 { name="stlELM"; version="0.1.0"; sha256="1sn4yn24k2nkcc5vxdmzj7ym9kzwffyysd5ckbpv7fggf1vajnif"; depends=[forecast nnfor]; }; + stlTDNN = derive2 { name="stlTDNN"; version="0.1.0"; sha256="1j2f9kxlry15xp7bc03h5jr7v8gzq8frdxyzhq9s78m3d3dbixf4"; depends=[forecast nnfor]; }; stlcsb = derive2 { name="stlcsb"; version="0.1.2"; sha256="08pnj1yb4xcbhnrp2wny8lq9rvcvmsgaza07k4358csfksvmcira"; depends=[dplyr lubridate purrr readr readxl rlang rvest sf stringr tibble xml2]; }; - stlnpp = derive2 { name="stlnpp"; version="0.3.6"; sha256="1h17bnkg9lnjs1dskxid3bddj0509f8jwnwn3z5h5qfblk2yf06q"; depends=[spatstat]; }; + stlnpp = derive2 { name="stlnpp"; version="0.3.7"; sha256="0ycx423qq8h53w6bd1kw6xv0skfsw19fqzyrp2scpw1af2496snq"; depends=[spatstat spatstat_core spatstat_geom spatstat_linnet]; }; stlplus = derive2 { name="stlplus"; version="0.5.1"; sha256="14728xsm982z9sg4rbqg307pbwqlsiyzj8z3sr9wr6fi0dayf6z5"; depends=[lattice Rcpp yaImpute]; }; stm = derive2 { name="stm"; version="1.3.6"; sha256="0qwq4nin2n9fjd06852r8k7arvcgh46kcfb3lm21swgx6j8bgrhb"; depends=[data_table glmnet lda Matrix matrixStats quadprog quanteda Rcpp RcppArmadillo slam stringr]; }; stmCorrViz = derive2 { name="stmCorrViz"; version="1.3"; sha256="1a4pckrbzsihyf1bqvw3cl0hxrc4yq1pnkgxgf4b8jday6zkxwcv"; depends=[jsonlite SnowballC stm tm]; }; stmgp = derive2 { name="stmgp"; version="1.0.3"; sha256="0yg2ffvaylhxfclkixk9n1wxigasvirdzdywqg016hjg7w166bp1"; depends=[MASS]; }; stmgui = derive2 { name="stmgui"; version="0.1.6"; sha256="1fn2m5l7y3p1riw39g6r3hpjxdccygih7yipp7dvc4msl9fm4h5c"; depends=[markdown shiny shinyBS shinyjs shinythemes stm tm]; }; - stminsights = derive2 { name="stminsights"; version="0.3.0"; sha256="11lhsk7l11bcxsmc7hm8pnwj75634m5gkigr714i16ai2dkvzqpq"; depends=[dplyr ggplot2 ggraph ggrepel huge igraph purrr readr scales shiny shinyBS shinydashboard shinyjs stm stringr tibble tidygraph]; }; + stminsights = derive2 { name="stminsights"; version="0.4.1"; sha256="1ll2chjz9r08lya2z7dnxjqdnwrvw7jn05mpvvxi1w8s2npsggib"; depends=[dplyr ggplot2 ggraph ggrepel huge igraph purrr readr scales shiny shinyBS shinydashboard shinyjs stm stringr tibble tidygraph]; }; stoRy = derive2 { name="stoRy"; version="0.1.5"; sha256="1ccx5xpjx4f6y4afay7zk195891xx2z6z2a11xqx5qg8rf0fv9jm"; depends=[data_tree R6]; }; stocc = derive2 { name="stocc"; version="1.30"; sha256="0xpf9101094l5l75p9lr64gwh2b8jh4saw6z6m2nbn197la3acpw"; depends=[coda fields Matrix rARPACK truncnorm]; }; stochQN = derive2 { name="stochQN"; version="0.1.2"; sha256="1zwxw95jrpkqgbgwhwdy907v9gqmvn5as4v35a75wvy3nhawka9a"; depends=[]; }; stochprofML = derive2 { name="stochprofML"; version="2.0.3"; sha256="0j6m2byh7w9kcbp3mfvmg6fm6z0dq8k4qabj1yfkl0d1y2ifd1zd"; depends=[MASS numDeriv]; }; - stochvol = derive2 { name="stochvol"; version="3.0.3"; sha256="0ci8a1g5a76s8xnccy38qali5p08yhbji7ab2qhzm5h2a5fj5k07"; depends=[coda Rcpp RcppArmadillo]; }; + stochvol = derive2 { name="stochvol"; version="3.0.4"; sha256="1w784p7qbiq2xjfhh7djs0zzy5lav3b5l2kjcdn2x5k6wydbfki1"; depends=[coda Rcpp RcppArmadillo]; }; stochvolTMB = derive2 { name="stochvolTMB"; version="0.1.2"; sha256="0m1b8jcrr8pxa2m9gzj7dljzr19j7n4w9i8m0p5mrb559ljbj0i0"; depends=[data_table ggplot2 RcppEigen sn TMB]; }; stockR = derive2 { name="stockR"; version="1.0.74"; sha256="002i0bhyskwyjjczfa752ghn19hvqhdyzdfkpvci3hb66rh94x65"; depends=[gtools RColorBrewer]; }; + stockfish = derive2 { name="stockfish"; version="0.1.2"; sha256="059mi39js7y4f7jlp23blql11j7n3j7137aac2fpp64wv6af0fsp"; depends=[processx R6]; }; stocks = derive2 { name="stocks"; version="1.1.4"; sha256="0b6rl7pfkgzbpwnv7zzkr36hs5f1zb60d16ijslf7g9m25vvcyg6"; depends=[dvmisc Hmisc lubridate quantmod rbenchmark RColorBrewer Rcpp TTR zoo]; }; stoichcalc = derive2 { name="stoichcalc"; version="1.1-3"; sha256="0z9fnapibfp070jxg27k74fdxpgszl07xiqfj448dkydpg8ydkrb"; depends=[]; }; - stokes = derive2 { name="stokes"; version="1.0-5"; sha256="0xbjkrm9g7r2xnj629i5cfmmqkw60iq4k6lk3skmkj3xh20lcd5x"; depends=[magrittr partitions permutations spray]; }; - stopwords = derive2 { name="stopwords"; version="2.1"; sha256="1g2p8gsj7xjck7idcwczgc7fmv72lzwjw00qarrj0cv44kypmiq8"; depends=[desc ISOcodes usethis]; }; - stormwindmodel = derive2 { name="stormwindmodel"; version="0.1.4"; sha256="1fwp5kazvx4q2yb9mjbbv36kkjli4prm7p4wihlq1pbw17q2mhrq"; depends=[dplyr ggplot2 lubridate maps plyr rlang stringr tidyr weathermetrics]; }; + stokes = derive2 { name="stokes"; version="1.0-7"; sha256="0wgj50319rvmj6b6fpzm5725v7fydh48gnijgf25327cvhkwlbh1"; depends=[magrittr mathjaxr partitions permutations spray]; }; + stopwords = derive2 { name="stopwords"; version="2.2"; sha256="1f862y30c4r0phamlp7shzkpxg0vh3i410xy0336w310hv3wqsxn"; depends=[ISOcodes]; }; storr = derive2 { name="storr"; version="1.2.5"; sha256="0qszdq16bf0dbss33zi63ciwmkgjsyc0c3akrr2kl14w3ncw6922"; depends=[digest R6]; }; stosim = derive2 { name="stosim"; version="0.0.14"; sha256="10k8j7manskjsrjc1l44yhy682b1qh0k2jx3cs5k69j2z42mnhmk"; depends=[Rcpp]; }; - stplanr = derive2 { name="stplanr"; version="0.8.0"; sha256="1cx1ywddpgy5hpm7c5frs4yrizf6xw4s0pkgp87rm8n6c47m9c26"; depends=[curl dplyr geosphere httr igraph jsonlite lwgeom magrittr maptools nabor raster Rcpp RcppArmadillo rgeos rlang sf sp stringr]; }; - stpm = derive2 { name="stpm"; version="1.7.9"; sha256="0adcagngk3f8avdwyzqkjm0vzdxdv8h6jvzljm9xdapna2m40pr3"; depends=[MASS nloptr Rcpp RcppArmadillo sas7bdat survival]; }; - stpp = derive2 { name="stpp"; version="2.0-4"; sha256="0y6k33qaqycw01288w36q82iq73nlsc2vkkaiamr3v312ja6gbxg"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat splancs]; }; + stplanr = derive2 { name="stplanr"; version="0.8.2"; sha256="0zljgrrwprpifnpnfm3bxws2zpgzbira3f6c0jr17nazala3w7sh"; depends=[curl data_table dplyr geosphere httr igraph jsonlite lwgeom magrittr maptools nabor pbapply raster Rcpp RcppArmadillo rgeos rlang sf sfheaders sp stringr]; }; + stpm = derive2 { name="stpm"; version="1.7.10"; sha256="0y9rpqjn33gdqjvag4kb6dr00w80paspgj9ic25brclfv1zmzbhf"; depends=[MASS nloptr Rcpp RcppArmadillo sas7bdat survival]; }; + stpp = derive2 { name="stpp"; version="2.0-5"; sha256="1p7dxzfhi5pvva956nyypl7dfdgq3m0cara73hai87qzc342xcf0"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat_core spatstat_geom splancs]; }; + str2str = derive2 { name="str2str"; version="0.1.1"; sha256="07micl45d5inhx0rlcfhanp64wdj85j51bgg8ba774arlc492r9b"; depends=[abind checkmate plyr reshape]; }; strand = derive2 { name="strand"; version="0.2.0"; sha256="0gd9nnbdilvk4bszg77bxilan6qpg1np7c38w1b7j5sr3r30y5in"; depends=[arrow dplyr ggplot2 lubridate Matrix R6 Rglpk rlang tibble tidyr yaml]; }; strap = derive2 { name="strap"; version="1.4"; sha256="0gdvx02w0dv1cq9bb2yvap00lsssklfnqw0mwsgblcy2j6fln7b0"; depends=[ape geoscale]; }; strat = derive2 { name="strat"; version="0.1"; sha256="1axxrp750kjzcgxjdqfscjmryv1mkv4l23zk8k23z8l4ymhd2f5w"; depends=[Hmisc Rcpp RcppArmadillo]; }; stratEst = derive2 { name="stratEst"; version="1.0.1"; sha256="1khbhx7mmmaxwsk5lyya9qqi6hvvi5psz1jfb5zdpmyykj09aa95"; depends=[Rcpp RcppArmadillo]; }; stratallo = derive2 { name="stratallo"; version="0.1.0"; sha256="0i8vqhf70x25p9z8amka2aaij7r28d83sp0nijim4n225bdfj6sk"; depends=[]; }; - stratamatch = derive2 { name="stratamatch"; version="0.1.5"; sha256="12yk738acsdgn8n7brgl2pnha7ii91mzrksihv2rgks820rdjxip"; depends=[dplyr Hmisc magrittr rlang survival]; }; + stratamatch = derive2 { name="stratamatch"; version="0.1.6"; sha256="1f2m2s0n8hhmzw4baf70f0h99mrc52p9n8sm4kmjri7b0brv7779"; depends=[dplyr Hmisc magrittr rlang survival]; }; stratbr = derive2 { name="stratbr"; version="1.2"; sha256="15vkymmc61yz9szhfhc5663hfyqvh499ahwhr9mv1lhv5bikk0kb"; depends=[Rglpk snowfall stratification]; }; strategicplayers = derive2 { name="strategicplayers"; version="1.0"; sha256="19vijrlzawd701vvk9ig7yhzbirh39dxxcwfz8ywwvxxiaky5x55"; depends=[sna]; }; stratification = derive2 { name="stratification"; version="2.2-6"; sha256="1jlks3g8wpqlpci6v0ryyv93agiabdiklmk6ij0pc5icrfiynbhw"; depends=[]; }; @@ -15462,11 +16077,11 @@ in with self; { streambugs = derive2 { name="streambugs"; version="1.2"; sha256="1363w0sf7lahcg3dhvl6l7hybgr71r21xbxs718a73zy5pnwm4s2"; depends=[deSolve]; }; stressaddition = derive2 { name="stressaddition"; version="3.1.0"; sha256="14ggy4ka9kll723jdir22g5l5xkwdckvd08gg6rxsmxryhznqd4a"; depends=[drc plotrix]; }; stressr = derive2 { name="stressr"; version="1.0.0"; sha256="00b93gfh1jd5r7i3dhsfqjidrczf693kyqlsa1krdndg8f0jkyj7"; depends=[lattice latticeExtra XML xts]; }; - strex = derive2 { name="strex"; version="1.4.1"; sha256="0lngpf8pgvpf2d74rw9xw4bsxcg1n2dmn5zz6y492py8q674lfhh"; depends=[checkmate magrittr rlang stringi stringr]; }; + strex = derive2 { name="strex"; version="1.4.2"; sha256="1m9dr5rv3s33kg2b2lr5lxsmbf6qs0nypxw2yx2hyzhsgq363mbn"; depends=[checkmate magrittr rlang stringi stringr]; }; strider = derive2 { name="strider"; version="1.3"; sha256="114j0qpdyg8rrhj68zq596pgc4h7ja39n0rfxf0x9qg7imhaj1h6"; depends=[BH Rcpp]; }; - stringb = derive2 { name="stringb"; version="0.1.14"; sha256="0hhqqsc3fif14dy623h6y3gxjg8lhff9wlglkygccs5iyhdjyl12"; depends=[backports]; }; + stringb = derive2 { name="stringb"; version="0.1.17"; sha256="0bfwwbg64nzxrx30cndqvdlhanjkx6875lg5dzm9cbwvwg2wbxcn"; depends=[backports]; }; stringdist = derive2 { name="stringdist"; version="0.9.6.3"; sha256="06rzbgw43vzg496xca82pydf3g2rz6iw6h50ai0prbp9hbwrhvfd"; depends=[]; }; - stringfish = derive2 { name="stringfish"; version="0.14.2"; sha256="1vaccbxr77si3siq5vy5v0crxrdqfxcl6y81s9zm58fd2p3wywwk"; depends=[Rcpp RcppParallel]; }; + stringfish = derive2 { name="stringfish"; version="0.15.1"; sha256="0164h7r1ar31491hrjl25snryqgghikwqqvl650m2p0l0ljvd2p3"; depends=[Rcpp RcppParallel]; }; stringformattr = derive2 { name="stringformattr"; version="0.1.2"; sha256="0x56k30clj5ajk0qg5sr8b9l0asz6ldivwr1ddy1vp1djliih1fx"; depends=[stringr]; }; stringi = derive2 { name="stringi"; version="1.5.3"; sha256="0420f7zn5knyyvd3a3xa7059l4kadw0m67rfpivacqn9xn6iwkr2"; depends=[]; }; stringr = derive2 { name="stringr"; version="1.4.0"; sha256="1p9ip7p87gbbg4s6d3d392svvzz2b5dqdq2c8ilgvn4s78nlsq47"; depends=[glue magrittr stringi]; }; @@ -15475,16 +16090,16 @@ in with self; { striprtf = derive2 { name="striprtf"; version="0.5.2"; sha256="1ra6aalalig6drsj26z9s24lmb10zssagqrvgqqi4358zbm8gwcd"; depends=[magrittr Rcpp stringr]; }; strm = derive2 { name="strm"; version="0.1.1"; sha256="0agl9x5g2y16aasrs4qaid0is5p602yksdwqk2xl8br4xlxdr9yx"; depends=[dplyr knitr magrittr purrr rgdal rlang rmarkdown spatialreg testthat tidyr]; }; strucchange = derive2 { name="strucchange"; version="1.5-2"; sha256="1y022363a4pp0mnji91sjh1qiyspkh09sybqwj03r9pmwrd7q93x"; depends=[sandwich zoo]; }; + strucchangeRcpp = derive2 { name="strucchangeRcpp"; version="1.5-3-1.0.2"; sha256="09lzyv9v5ylm8bn13s0f231zsfsdfj52cjx0zvfvk35v4pwk3blm"; depends=[Rcpp RcppArmadillo sandwich zoo]; }; structree = derive2 { name="structree"; version="1.1.7"; sha256="178x6maghjaw9lkyjr84pq916vbq0ldh5gqia0r0vqs8k8dvna9i"; depends=[lme4 mgcv penalized]; }; strvalidator = derive2 { name="strvalidator"; version="2.3.0"; sha256="0m1nxpvb7hbx9n00mc0ar7ay1sk8h819cmf0r0g323z23axq1kdx"; depends=[data_table ggplot2 gridExtra gtable gWidgets2 MASS plyr scales]; }; stsm = derive2 { name="stsm"; version="1.9"; sha256="18ypmkd7l7m7qkahb0nqf8f1m8g4irxlw48v2ms0dq1bsnhbzx7j"; depends=[KFKSDS]; }; - stsm_class = derive2 { name="stsm.class"; version="1.3"; sha256="19jrja5ff31gh5k2zqhqsyd7w2ivr4s6bkliash6x8fmd22h5zs8"; depends=[]; }; stuart = derive2 { name="stuart"; version="0.9.1"; sha256="1y58kxlcq4zynyb6fnpdv3ik9gza83kyaz73w033snhmj9dqihfm"; depends=[]; }; stubthat = derive2 { name="stubthat"; version="1.2.1"; sha256="130naxzvswcyadwcgldvwnxxdxbfwx5vljac7901vn3ahjp75d8z"; depends=[testthat]; }; studentlife = derive2 { name="studentlife"; version="1.1.0"; sha256="1xvlcwg7ckxsm5hb5ax8r3hzdqnx61ax59ini5xc5jrsmir13g67"; depends=[crayon dplyr ggplot2 jsonlite purrr R_utils readr skimr tibble tidyr visdat]; }; studyStrap = derive2 { name="studyStrap"; version="1.0.0"; sha256="0lvzqnq40j0xn74qrj0pqhr8zz34mbhfd7dg8bnadscsvj5ffm4c"; depends=[caret CCA dplyr MatrixCorrelation nnls pls tibble tidyverse]; }; - styler = derive2 { name="styler"; version="1.3.2"; sha256="1waglhsy2c53qjgd2qhlzda3z0lbzbwx9fkrfhac41y6h91mgkrz"; depends=[backports cli magrittr purrr R_cache rematch2 rlang rprojroot tibble withr xfun]; }; - stylest = derive2 { name="stylest"; version="0.1.0"; sha256="0dr7j9fh8kp6wsqql38s3rk596xl6m9nx0w1l5v25hv2bphidxzr"; depends=[corpus Matrix]; }; + styler = derive2 { name="styler"; version="1.4.1"; sha256="10fj4cnazicb2z9djbv5pszcmrf7wbzagbjvksffqpdc5vbbbw5x"; depends=[backports cli magrittr purrr R_cache rematch2 rlang rprojroot tibble withr xfun]; }; + stylest = derive2 { name="stylest"; version="0.2.0"; sha256="1c036zsn1gi5vhsz37p56wz1bcr3pwdp2k62j7ikmrrnkcv2w9kz"; depends=[corpus Matrix]; }; stylo = derive2 { name="stylo"; version="0.7.4"; sha256="0vjfpz4bpdrsax7a0gsj9cwddbsayb4n5fr5xskz63lfrjg2ppcb"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; suRtex = derive2 { name="suRtex"; version="0.9"; sha256="0xcy3x1079v10bn3n3y6lxignb9n3h57w4hhrvzi5y14x05jjyda"; depends=[]; }; subcopem2D = derive2 { name="subcopem2D"; version="1.3"; sha256="06wwd847g9pxd0z2a8494h3nc9s280a3s1510bir24m3z7w1pqf3"; depends=[]; }; @@ -15494,15 +16109,15 @@ in with self; { subgxe = derive2 { name="subgxe"; version="0.9.0"; sha256="0faww87ncylqixb640hc2axvn4i50d2r2ggngmd7s9wazbb6sd55"; depends=[]; }; sublime = derive2 { name="sublime"; version="1.3"; sha256="0455fppc68azxknxjvxci4kjpcj6c1jkp9adbxqrn3qnnywaj5v2"; depends=[AnalyzeFMRI downloader oro_nifti]; }; submax = derive2 { name="submax"; version="1.1.1"; sha256="0b9x55gqzw20smr3hx9izvyr0i8zv0h03hadn4c7ks7w8ga5i0kj"; depends=[mvtnorm sensitivityfull]; }; - subniche = derive2 { name="subniche"; version="1.3"; sha256="11idxnxqq87q1lzdc2xiw2w9znxlb21rf2jz3bhq4ykzk2dbqs50"; depends=[ade4 polyclip siar wordcloud]; }; + subniche = derive2 { name="subniche"; version="1.4"; sha256="10j7wz4hyqvpi7iqq7m6jb13g0wr7k59rkxyyhfkmcq1vgm2cpdx"; depends=[ade4 polyclip siar wordcloud]; }; subplex = derive2 { name="subplex"; version="1.6"; sha256="1yfbfjvpbhgky7vihw3f4jl41pxpqb39z4nc045d5z7z48bdl18d"; depends=[]; }; subrank = derive2 { name="subrank"; version="0.9.9.1"; sha256="19lgw7248jq6b34i17c7vw208wsvmppni7njswd02i9xdgyjn95z"; depends=[]; }; subsamp = derive2 { name="subsamp"; version="0.1.0"; sha256="1bfz2z2qy1war3id8qr1asygwvwxgf2hhlh075hr6bjdkxz0j0nd"; depends=[]; }; subscore = derive2 { name="subscore"; version="3.1"; sha256="1hb4ci62hxffz09sz0i27jfw7xn0pca87kiq6damz5zi418csa4v"; depends=[boot cocor CTT irtoys ltm sirt]; }; - subscreen = derive2 { name="subscreen"; version="3.0.2"; sha256="0jmm6n06psi1f9pi3mdhxvfnhl3lpslv9r7sfcf9pjq9lhh7ich4"; depends=[bsplus colourpicker data_table dplyr DT jsonlite plyr purrr randomForestSRC shiny shinyjs shinyWidgets]; }; + subscreen = derive2 { name="subscreen"; version="3.0.5"; sha256="0786p2n1a4xjsxnd31w2b079ggdzx9pgn14d5vbngrc6mgjm9hk8"; depends=[bsplus colourpicker data_table dplyr DT jsonlite plyr purrr randomForestSRC shiny shinyjs shinyWidgets]; }; subselect = derive2 { name="subselect"; version="0.15.2"; sha256="0ggpm5bq4ncx4302855s8x1nj0afjizmi81cg6b7xc7rvpirw0fq"; depends=[corpcor ISwR MASS]; }; subspace = derive2 { name="subspace"; version="1.0.4"; sha256="0p2j0lnwj3ym1v4xla6r97zjikb8alnibdc690xn9c0z21hmv43v"; depends=[colorspace ggvis rJava stringr]; }; - subtee = derive2 { name="subtee"; version="0.3-6"; sha256="08mq1y2q4zpv07iaq27dh6d6by1b5z67na0gddn54ng9x0yqgihy"; depends=[ggplot2 MASS matrixStats survival]; }; + subtee = derive2 { name="subtee"; version="0.3-7.1"; sha256="0cvqpmwkw6bzygvkd3842sikfm3lbrhch317pc3n4z0ffz3w2xxn"; depends=[ggplot2 MASS matrixStats survival]; }; subtype = derive2 { name="subtype"; version="1.0"; sha256="1094q46j0njkkqv09slliclp3jf8hkg4147hmisggy433xwd19xh"; depends=[penalized ROCR]; }; sudachir = derive2 { name="sudachir"; version="0.1.0"; sha256="09ry00c3yhrz8fiyxdxgj9r3x7kldsl6fv35mmi5ysc2549kbcfb"; depends=[cli dplyr glue magrittr purrr reticulate rlang tibble tidyselect]; }; suddengains = derive2 { name="suddengains"; version="0.4.4"; sha256="160jna9imnpy91f6pa881w6wlrwy59db0nijrn1sf5ym1cmh5gz5"; depends=[dplyr forcats ggplot2 ggrepel magrittr naniar patchwork psych readr rlang scales stringr tibble tidyr]; }; @@ -15510,9 +16125,9 @@ in with self; { sudokuAlt = derive2 { name="sudokuAlt"; version="0.2-1"; sha256="1y3li64xqag2ia8dg7q49jmlb1awl92rz6xa9zsbf0s9jman9wj9"; depends=[magrittr]; }; sugarbag = derive2 { name="sugarbag"; version="0.1.3"; sha256="05j2b9vbhpkfr3xkam9wgm0w4k8blnm1ssf9cd6l5f1y2rrqizsv"; depends=[dplyr geosphere lwgeom progress purrr rlang rmapshaper sf tibble tidyr utf8]; }; sugrrants = derive2 { name="sugrrants"; version="0.2.8"; sha256="08cs74afpkvjh32hlrwbl8sdsi3p0ga4ziw32r9pihs28a060fam"; depends=[dplyr ggplot2 gtable lubridate rlang]; }; - sumFREGAT = derive2 { name="sumFREGAT"; version="1.2.0"; sha256="07vf5fyxca9vci4v5akw55f4qif8cdw5g980vbcg43vkk3q4i5h3"; depends=[GBJ Matrix seqminer]; }; + sumFREGAT = derive2 { name="sumFREGAT"; version="1.2.1"; sha256="1dpm0qqcf8k881wj972q3sma8zlgskkzrbsmlpc77wcfgsmwqdnm"; depends=[GBJ Matrix seqminer]; }; summariser = derive2 { name="summariser"; version="2.3.0"; sha256="0zliqy8dlcr2yy4ky8k68qn256xvpla8fcv7via19y40bmla37ic"; depends=[dplyr]; }; - summarytools = derive2 { name="summarytools"; version="0.9.8"; sha256="0n7rad6bkfn9cb99wbfzbwl5qzch48r0gafhddfcqvyh4fbn2k0j"; depends=[base64enc checkmate dplyr htmltools lubridate magick matrixStats pander pryr rapportools tibble tidyr]; }; + summarytools = derive2 { name="summarytools"; version="0.9.9"; sha256="0ig7vgjvldbndwhky1bsi38zifr9ji8xvvfqbfffplac08llvrbr"; depends=[base64enc checkmate dplyr htmltools lubridate magick matrixStats pander pryr rapportools tibble tidyr]; }; sunburstR = derive2 { name="sunburstR"; version="2.1.5"; sha256="133d5my4bazw5wkv31h3rsqw0d43nxw94bq2sg8c5n4bqkpsvrhm"; depends=[d3r dplyr htmltools htmlwidgets]; }; suncalc = derive2 { name="suncalc"; version="0.5.0"; sha256="1chkl297km313m89h9mbp7vnpz188fhzz5dn8x5cjkqy0mm6c0qc"; depends=[data_table lubridate magrittr]; }; sundialr = derive2 { name="sundialr"; version="0.1.4"; sha256="03gvcks5i8fh8x8p4zimn4xz3x8b0ai1wmjyx9zis82rdgaa0pg3"; depends=[Rcpp RcppArmadillo]; }; @@ -15520,24 +16135,26 @@ in with self; { supclust = derive2 { name="supclust"; version="1.1-0"; sha256="08pdd8azvd5c7cs62dh3wp7jvcwcwcjyy73r4ki2a0pw68fhkn9y"; depends=[class rpart]; }; supcluster = derive2 { name="supcluster"; version="1.0"; sha256="1rkd4bpzzvzbmqaj907pqv53hxcgic0jklbsf5iayf0ra768b5w6"; depends=[gtools mvtnorm]; }; superMDS = derive2 { name="superMDS"; version="1.0.2"; sha256="0jxbwm3izk7bc3bd01ygisn6ihnapg9k5lr6nbkr96d3blpikk04"; depends=[]; }; + superb = derive2 { name="superb"; version="0.9.5.0"; sha256="09yjrpv6ybf3f2p9wipp60nl16c5jhg915rclr821lncwgwzbsv9"; depends=[ggplot2 lsr MASS plyr Rdpack]; }; superbiclust = derive2 { name="superbiclust"; version="1.1"; sha256="1gzjbzbl8y1nzdfhyd6dlrwjq8mwj43a26qav84s1bdzwx6dra48"; depends=[biclust fabia Matrix]; }; superdiag = derive2 { name="superdiag"; version="2.0"; sha256="0zfy9ain6agh276av0p66mks3rap42n8yma0dr6qbc14z3nh8w0m"; depends=[coda]; }; superheat = derive2 { name="superheat"; version="0.1.0"; sha256="01v8s6px1k5fajlm6py3ksr1i853kwwlky1yryzhy3p1cxhwgg83"; depends=[dplyr ggdendro ggplot2 gtable magrittr plyr scales]; }; superml = derive2 { name="superml"; version="0.5.3"; sha256="1k0hcjspv0q6wg0yarvgjs7ql7d587nijicmz3lfhpph2n3hghvb"; depends=[assertthat BH data_table Metrics R6 Rcpp RcppArmadillo]; }; - supernova = derive2 { name="supernova"; version="2.2.3"; sha256="017dsmxk7a6szkgzmq9qfv5lzvxbkbz9dvhga5v0gmp2myiswji0"; depends=[lme4 magrittr purrr stringr vctrs]; }; + supernova = derive2 { name="supernova"; version="2.4.0"; sha256="1qxa0yand1k323f56c4lzynma9mnavdvjdp8zcf0dzg282w43s32"; depends=[cli ggplot2 magrittr pillar purrr rlang stringr tibble vctrs]; }; superpc = derive2 { name="superpc"; version="1.12"; sha256="0n68qafsww00q0wx37ms3rimrlhbp085ywvv2k5vw951j4z8ivfb"; depends=[survival]; }; supervisedPRIM = derive2 { name="supervisedPRIM"; version="2.0.0"; sha256="1j5gsy119pvrhkkg048lyk6hjvn9x1bhmfy5g824gj3k1w5slrib"; depends=[prim]; }; suppdata = derive2 { name="suppdata"; version="1.1-6"; sha256="0iq3rghynqxljrw2lqp102qs3w4wizj7j8pp5rf1bki7m6y8h19k"; depends=[httr jsonlite rcrossref xml2]; }; - support_BWS = derive2 { name="support.BWS"; version="0.4-2"; sha256="0kfl2ca8gd62k9ddiqf88c6g3a26g3mkf9kyk6bpgfck5lw7dpj8"; depends=[]; }; + support_BWS = derive2 { name="support.BWS"; version="0.4-3"; sha256="19k14p28f85j7bm4ya0s2a9813m2p1p3x5h4fp1hg47rdgwxzb4n"; depends=[]; }; support_BWS2 = derive2 { name="support.BWS2"; version="0.3-0"; sha256="0k9yvg0n4lzsq43r53r9f70hq1q3zfljjafj9ds2p3c6qzgs9chi"; depends=[]; }; support_BWS3 = derive2 { name="support.BWS3"; version="0.2-0"; sha256="012kcvscz7m2is92r71731zc7xnp7pwyx30vivwjazrigp9bq1kl"; depends=[]; }; - support_CEs = derive2 { name="support.CEs"; version="0.4-1"; sha256="1rbyl7v6m07dsp08kkk9020bh39rhx89q7d05rc5kxb6f7y66jyz"; depends=[DoE_base MASS RCurl simex XML]; }; + support_CEs = derive2 { name="support.CEs"; version="0.5-0"; sha256="194vnld2rg5qcp6vmcx259icj7gl1kyrivh8v8hygy9fy6dp16wc"; depends=[DoE_base MASS simex]; }; supportInt = derive2 { name="supportInt"; version="1.1"; sha256="14fh75sds05c06xkcfbijd8my3sa9kpnczzh96xx0gwj1193yya9"; depends=[ProfileLikelihood]; }; supreme = derive2 { name="supreme"; version="1.1.0"; sha256="0y5kd911f7h754ppdpw94qw3r8vzz3yhyj5b99h3h96iifydlik6"; depends=[nomnoml shiny yaml]; }; sur = derive2 { name="sur"; version="1.0.4"; sha256="0rp5pwx3m6nzcy73wzmxpsxp9pc7swj2w5b82m0zdxq5kv9hsjsl"; depends=[learnr]; }; surbayes = derive2 { name="surbayes"; version="0.1.2"; sha256="0n01g84cwq5aj4qafk1zf60ka7s9z3q2gkgzp5xw9dx5lgfh7dgb"; depends=[Matrix Rcpp RcppArmadillo rlist]; }; sure = derive2 { name="sure"; version="0.2.0"; sha256="0gwr2j321i2vq98rin5b1m4sl123dm1nih1ghcmj0zd1wd6x5x54"; depends=[ggplot2 goftest gridExtra]; }; sureLDA = derive2 { name="sureLDA"; version="0.1.0-1"; sha256="09ls5gv9jip2pw38qw3v2ag91fgmmkq989pyr8c8j92nbwk6i3hr"; depends=[doParallel foreach glmnet MAP Matrix pROC Rcpp RcppArmadillo]; }; + surf = derive2 { name="surf"; version="1.0.0"; sha256="0hiqs55apwq02lm0hr0r06zg734yr5w2xn9cdqjq3bk4lap4m0q1"; depends=[abind MASS Matrix numDeriv survey]; }; surface = derive2 { name="surface"; version="0.5"; sha256="1fw75543aa6yafldffh9cnpm6m0rif0fpcihwj56d7nfnkbslawz"; depends=[ape geiger MASS ouch]; }; surrosurv = derive2 { name="surrosurv"; version="1.1.25"; sha256="05s1skjp1vzwai2nfw65ff4q2qhbj596lhfvzd1gdrbs39r90hxh"; depends=[copula eha lme4 MASS Matrix msm mvmeta optextras optimx parfm SurvCorr survival]; }; surrosurvROC = derive2 { name="surrosurvROC"; version="0.1.0"; sha256="1dpqr9dqzckgvdfrb2ndxazra0lbp6db9wbjch4vig3kyz6nyw4y"; depends=[survival]; }; @@ -15545,15 +16162,16 @@ in with self; { survAUC = derive2 { name="survAUC"; version="1.0-5"; sha256="0bcj982ib1h0sjql09zbvx3h1m96jy9q37krmk6kfzw25ms6bzzr"; depends=[survival]; }; survAWKMT2 = derive2 { name="survAWKMT2"; version="1.0.0"; sha256="1cv39rf1ia4nwrri9d9izy6lxndnfwqy2vzrb9rrxga2qplxl79k"; depends=[survival]; }; survBootOutliers = derive2 { name="survBootOutliers"; version="1.0"; sha256="1gfh2n1kd1m4bpd1j7islm5ar1qmzycnmfpb8zl8ghv0z5rf5f09"; depends=[survival]; }; - survC1 = derive2 { name="survC1"; version="1.0-2"; sha256="1bidjhq3k5ab7gqj1b2afngip7pp6c9c7q0m6ww7h7i2vg505l7v"; depends=[survival]; }; + survC1 = derive2 { name="survC1"; version="1.0-3"; sha256="1ays0qlrafg1p0rvxq119skj0ciz4knxycrgrb93nikl4snmkkvw"; depends=[survival]; }; survCurve = derive2 { name="survCurve"; version="1.0"; sha256="0zspyxzn99ljiqp1111202714rqs4vg6j2rv66qv8ilxajvdxxas"; depends=[survival]; }; survELtest = derive2 { name="survELtest"; version="2.0.1"; sha256="03jnj88z45iw9v1628bz99608q2jwbqw6cfsvqal2jj4392fz428"; depends=[Iso nloptr plyr survival]; }; - survHE = derive2 { name="survHE"; version="1.1.1"; sha256="19qp4mmg4agidxwfyqmxd9j01zi3r4qn3z2ph4l45svjvf5bkk27"; depends=[BH dplyr flexsurv ggplot2 Rcpp RcppEigen rms rstan StanHeaders tibble xlsx]; }; + survHE = derive2 { name="survHE"; version="1.1.2"; sha256="17hdhwkzyrkk4ijyscnv9644iinxvc566n84zq2490hfvlsk6nql"; depends=[BH dplyr flexsurv ggplot2 Rcpp RcppEigen rms rstan StanHeaders tibble xlsx]; }; survIDINRI = derive2 { name="survIDINRI"; version="1.1-1"; sha256="03lsypx189zm28gv764gdq24a18jj3kpdk91ssa501qxj5jv7v29"; depends=[survC1 survival]; }; survJamda = derive2 { name="survJamda"; version="1.1.4"; sha256="14ly1g548ysm8jgsyrhj12zmd6i2lca7rsgby3jbwikyqyk1mx5q"; depends=[ecodist survcomp survival survivalROC survJamda_data]; }; survJamda_data = derive2 { name="survJamda.data"; version="1.0.2"; sha256="0a010v2ar48i5m0jiqjvdyqm93ckfgfmcmym9a02h0rclnizd75r"; depends=[]; }; + survMS = derive2 { name="survMS"; version="0.0.1"; sha256="0313pwf0l6wq9l4qjj1al9ybzm79kdxwzdrw6k0af706rxfzzha0"; depends=[ggplot2]; }; survMisc = derive2 { name="survMisc"; version="0.5.5"; sha256="00nvvl8gz4477ab24rd0xvfksm8msv8h021b9ld5c9cizc41n2bm"; depends=[data_table ggplot2 gridExtra km_ci KMsurv knitr survival xtable zoo]; }; - survParamSim = derive2 { name="survParamSim"; version="0.1.4"; sha256="07imxng38r1wg9zb72cl2g7vgvawy5r0z9shqa2h6nrvjknp2ssp"; depends=[dplyr forcats ggplot2 magrittr mvtnorm purrr rlang survival tibble tidyr]; }; + survParamSim = derive2 { name="survParamSim"; version="0.1.5"; sha256="0jk4dwxm2q0sckjx3njadjhpk4hym817xn2r555cl1vd1x9xpqjy"; depends=[broom dplyr forcats ggplot2 lifecycle magrittr mvtnorm purrr rlang survival tibble tidyr]; }; survPen = derive2 { name="survPen"; version="1.5.1"; sha256="0c1lnkl7sc1967y86g4y9an13bqiv62pxiwz496xdhbzvwliqh31"; depends=[Rcpp RcppEigen statmod]; }; survPresmooth = derive2 { name="survPresmooth"; version="1.1-10"; sha256="0m1037v857g140lypck5zq2zf52rkdxzaqlj9kjn7h7lp6gif6ia"; depends=[]; }; survRM2 = derive2 { name="survRM2"; version="1.0-3"; sha256="1x526ax39xx4zbhr6bdzphj4sljnl070vm0qh1479r1gj0vmmhif"; depends=[survival]; }; @@ -15562,7 +16180,8 @@ in with self; { survRatio = derive2 { name="survRatio"; version="0.1"; sha256="1xrqin3q3b7r8ga4i71ci97rsm4lj5ffd0720n7s563jkpnpyb9l"; depends=[ggplot2 ggpubr gridExtra survival]; }; survSNP = derive2 { name="survSNP"; version="0.24"; sha256="0mzwcp8zfqvsiapa446si9qb6wyymnw5zj6acj6f2cfjpyi76k4w"; depends=[foreach lattice Rcpp survival xtable]; }; survSens = derive2 { name="survSens"; version="0.1.0"; sha256="1s4s5l31yps93s2zdxpidkdg8kmmwj6vb3zfndmnxvc07arwhvbv"; depends=[directlabels ggplot2 survival]; }; - surveillance = derive2 { name="surveillance"; version="1.18.0"; sha256="01iy6dlkd5w9191vr3agm3fgl3vbh2yaan5rsgn0ki741gf2zdag"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; }; + survSpearman = derive2 { name="survSpearman"; version="1.0.0"; sha256="06xric3fwv2rdrbapsawrg288s2sflzrbx1a4yc7lzxzxbsbs619"; depends=[]; }; + surveillance = derive2 { name="surveillance"; version="1.19.1"; sha256="1665n26qs79b3hj4wdp13qjr13w6g32jvbpc4qpcn39bgql6i599"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat spatstat_geom xtable]; }; survexp_fr = derive2 { name="survexp.fr"; version="1.0"; sha256="12rjpnih0xld4dg5gl7gwxdxmrdmyzsymm7j05v98ynldd1jkjl8"; depends=[survival]; }; survey = derive2 { name="survey"; version="4.0"; sha256="1q9x0s86s72gl43zj49gypg6jj2b78xjvxr4lmy5147s9h7z8lxh"; depends=[lattice Matrix minqa mitools numDeriv survival]; }; surveybootstrap = derive2 { name="surveybootstrap"; version="0.0.1"; sha256="13rp6gj1dgdzcjbi2403pldygp1dyqx8zj0r1nvyghpi06x5gpb7"; depends=[dplyr functional plyr Rcpp RcppArmadillo stringr]; }; @@ -15571,65 +16190,68 @@ in with self; { surveyoutliers = derive2 { name="surveyoutliers"; version="0.1"; sha256="03nqw0zir3x57gg23hgsr2s99pv958kfsygqfwly96rvfdhr5p3v"; depends=[]; }; surveyplanning = derive2 { name="surveyplanning"; version="4.0"; sha256="19ydgcwyvkhknf4qmlw7j25skcj9a4rd6s8j5n7bdqpljl60zync"; depends=[data_table laeken]; }; surveysd = derive2 { name="surveysd"; version="1.3.0"; sha256="0d5xjdlccqaa1h437rz5zq6a829rpz426m55jgprhfpcps1wfhbk"; depends=[data_table ggplot2 laeken Rcpp]; }; - survidm = derive2 { name="survidm"; version="1.2.0"; sha256="0dgcxhf8x1aavr4n4aqanfc23zd62dyk3h05sa04611h6n9l8j9c"; depends=[doParallel doRNG foreach KernSmooth np survival TPmsm]; }; - survival = derive2 { name="survival"; version="3.2-7"; sha256="0ila864g5b9yhjhk3jirgdpi06sksc0axa78890dmkvyv9rwsmjk"; depends=[Matrix]; }; + survidm = derive2 { name="survidm"; version="1.3.1"; sha256="0ymjc59l3vk2w3bwn3md79a9x90cy2hzhdpkq294c27pp24y742c"; depends=[doParallel doRNG foreach ggplot2 gridExtra KernSmooth np plotly Rcpp survival TPmsm]; }; + survival = derive2 { name="survival"; version="3.2-11"; sha256="0w0gkni1w8rbmfw7yl08bl1s9lij1yhbkj4dvmxcarkkw26sjjzs"; depends=[Matrix]; }; + survivalAnalysis = derive2 { name="survivalAnalysis"; version="0.2.0"; sha256="1sx7xjqkwc3788j0520kgv602m3gdlmpg1ps9fm8lhsjb8dmvlya"; depends=[cowplot dplyr forcats ggplot2 gridExtra magrittr purrr rlang scales stringr survival survminer tibble tidyr tidytidbits]; }; survivalMPL = derive2 { name="survivalMPL"; version="0.2"; sha256="05bfa9fx841kh9g2jcs1dimsxkjnf4bxgamcnjpisx3a644c1gkn"; depends=[MASS survival]; }; survivalMPLdc = derive2 { name="survivalMPLdc"; version="0.1.1"; sha256="1wqlzpwm1p7nq19l3d7c93zv6fnn0b1w24kak9zwsgyhar3f5lv9"; depends=[copula matrixcalc splines2 survival]; }; survivalROC = derive2 { name="survivalROC"; version="1.0.3"; sha256="0wnd65ff5w679hxa1zrpfrx9qg47q21pjxppsga6m3h4iq1yfj8l"; depends=[]; }; - survivalmodels = derive2 { name="survivalmodels"; version="0.1.4"; sha256="0zphifvdpvs58f4z6nxi1w9ry480q98wvx7as7v13240gb7djvrr"; depends=[Rcpp]; }; + survivalmodels = derive2 { name="survivalmodels"; version="0.1.8"; sha256="0dsssvlry07559f17wdlkm1l6cbsng529xmakmwa2nkfm451qjqj"; depends=[Rcpp]; }; survivalsvm = derive2 { name="survivalsvm"; version="0.0.5"; sha256="1b4hrdrqq1z0kfn8vpdwg54388m25df2s6w9i574x3mkxkmkjkga"; depends=[Hmisc kernlab Matrix pracma quadprog survival]; }; - survminer = derive2 { name="survminer"; version="0.4.8"; sha256="1niysd89mxb2a6ncvzm1s6xgfvq3psba65af0whh2p56r2hwrwff"; depends=[broom dplyr ggplot2 ggpubr gridExtra magrittr maxstat purrr rlang scales survival survMisc tibble tidyr]; }; + survivoR = derive2 { name="survivoR"; version="0.9.2"; sha256="0g2clj1znpfv62zzxbhfiypj5bggnc2nqbr3bb5lbz5zssxfqrjs"; depends=[dplyr forcats ggplot2 glue magrittr stringr tidyr]; }; + survminer = derive2 { name="survminer"; version="0.4.9"; sha256="0byh0wxdbjfwdrzsnqv4xlmnik6lj0vkkzfxy7lssk8dv5zmj7nz"; depends=[broom dplyr ggplot2 ggpubr ggtext gridExtra magrittr maxstat purrr rlang scales survival survMisc tibble tidyr]; }; + survmixer = derive2 { name="survmixer"; version="1.3"; sha256="00s06h7nn8li4d2kn4yzlnj3px1wkpvnx5w73y98cvrcwm0ad71g"; depends=[]; }; survsim = derive2 { name="survsim"; version="1.1.5"; sha256="0194w1h3v4p546wibp3xyhy2r84w3p9r6ggzhlf11v8467mjy0l9"; depends=[eha statmod]; }; survtmle = derive2 { name="survtmle"; version="1.1.1"; sha256="1l13rvwq4915ij2a55fxdj3b3wkgjca1fbqzcgkjlpzkcn97k1nj"; depends=[dplyr ggplot2 ggsci Matrix plyr speedglm stringr SuperLearner tidyr]; }; survxai = derive2 { name="survxai"; version="0.2.2"; sha256="09ig561754kjzpay2hy3n62zlk0bgwkjy8vnslrr428r8m1lj0qr"; depends=[breakDown ggplot2 pec prodlim scales survival survminer]; }; sutteForecastR = derive2 { name="sutteForecastR"; version="0.1"; sha256="13dd0v3l3s7xb1wnpf6qvnvclzab87831z8bsxsq53vpb26xcw1b"; depends=[forecast forecastHybrid fracdiff robets]; }; - svDialogs = derive2 { name="svDialogs"; version="1.0.0"; sha256="0xqppydfawnwk84kb5qiybwbcmv38vn4imgz01mz2pnq4xb80p97"; depends=[rstudioapi svGUI]; }; + svDialogs = derive2 { name="svDialogs"; version="1.0.3"; sha256="0j00xjvkwv992ir48czhvyj29rb9vpd243vbyyj2binn0q0qa431"; depends=[rstudioapi svGUI]; }; svDialogstcltk = derive2 { name="svDialogstcltk"; version="0.9-4"; sha256="16166f8i6nsg7palqmnlp5b9s91d6ja9n0zm6rcvd2fwnw2ljkr4"; depends=[svDialogs svGUI]; }; - svGUI = derive2 { name="svGUI"; version="1.0.0"; sha256="1r7ab0p4yr8q03gj02hmj7k1ghksgkg4nx750c0ajfs2q9y1dxfc"; depends=[]; }; + svGUI = derive2 { name="svGUI"; version="1.0.1"; sha256="0ch5gdfk834xj9w3vxpm3x4770fz3nnlyn8b0jsw9f3n2as7g979"; depends=[]; }; svHttp = derive2 { name="svHttp"; version="0.9-55"; sha256="0qxsh6ifk3fszgzz497qwia4pxzplwraf2qnn5cqlv5l79nja5yq"; depends=[svMisc]; }; svIDE = derive2 { name="svIDE"; version="0.9-54"; sha256="1a03xpjx22xhxfqkgcm1pmal0dlp544hvnckj0p6sy4y56hmsfik"; depends=[svMisc XML]; }; svKomodo = derive2 { name="svKomodo"; version="0.9-63"; sha256="0x2774lhckhg8kw6plsn6dpks3b3fisb0psa03p7di7jx8vrkg5n"; depends=[svMisc]; }; - svMisc = derive2 { name="svMisc"; version="1.1.0"; sha256="01r2a73wx2sh1njky961fxabx5wgddqqjqba6vjg0f3h8r3abmn2"; depends=[]; }; + svMisc = derive2 { name="svMisc"; version="1.1.4"; sha256="0y8mhiblyzwads4gf4whmxi7c6wdmqs3ahbj132l79bbdk40p83a"; depends=[]; }; svSocket = derive2 { name="svSocket"; version="1.0.1"; sha256="1d4kp095r2vpdji2wji5al5ff1lzky817qh4id9fdbi1kiif97jz"; depends=[svMisc]; }; svSweave = derive2 { name="svSweave"; version="0.9-8"; sha256="0zkng8lwdpjdbic9f6jnk2ndxbch2kjyz71ds1bksvd3kmk03lks"; depends=[knitr]; }; svTools = derive2 { name="svTools"; version="0.9-5"; sha256="040wr8cr2p35x6pr515bprmsw8ysajx4df5f2njz3ily61xf9szi"; depends=[codetools svMisc]; }; - svUnit = derive2 { name="svUnit"; version="1.0.3"; sha256="0awz9ks0y1n98y9nq6rq65yj7y22z5q4a5w5qhkszkgc9669q1dw"; depends=[]; }; + svUnit = derive2 { name="svUnit"; version="1.0.6"; sha256="08nmlbdrmmz04ira30721l99i74w07w2avdr4pypswf2sq1nqgi6"; depends=[]; }; svWidgets = derive2 { name="svWidgets"; version="0.9-45"; sha256="08cpsy4abypjnv33arsgxk5i0gpdvdzj60wa1b22ca1n7d35mc80"; depends=[svMisc]; }; - svars = derive2 { name="svars"; version="1.3.5"; sha256="0z6ii85q3bx8c6kbpz4k4apksmwnixzgn4s68d0py320il8sdaal"; depends=[clue copula DEoptim expm ggplot2 pbapply Rcpp RcppArmadillo reshape2 steadyICA strucchange vars zoo]; }; + svars = derive2 { name="svars"; version="1.3.7"; sha256="0dfq2bbfdkksbpv4rn096h754s389badcz70lr6kg3byhfxx9kaa"; depends=[clue copula DEoptim expm ggplot2 pbapply Rcpp RcppArmadillo reshape2 steadyICA strucchange vars zoo]; }; svd = derive2 { name="svd"; version="0.5"; sha256="18bi42pgml9i8jflfk29ws0bfblkj3f69z9p9mkd0m8kcx4d8hnh"; depends=[]; }; svdvisual = derive2 { name="svdvisual"; version="1.1"; sha256="02mzh2cy4jzb62fd4m1iyq499fzwar99p12pyanbdnmqlx206mc2"; depends=[lattice]; }; svenssonm = derive2 { name="svenssonm"; version="0.1.0"; sha256="0pvay9vfrcafaq270pq6glp2b74zdfgldksl13cwdb0wk7qx7731"; depends=[]; }; svgPanZoom = derive2 { name="svgPanZoom"; version="0.3.4"; sha256="1iglgwbyxf5q4716h9ba2cfmxh1qq16zwy54krnawg4580v8ydh2"; depends=[htmlwidgets]; }; svgViewR = derive2 { name="svgViewR"; version="1.4.1"; sha256="0xppvrfl7q3viahvwvmn498wli74ldwijapf6n432gvc4phmy7wi"; depends=[Rcpp rjson Rook]; }; - svglite = derive2 { name="svglite"; version="1.2.3.2"; sha256="00n8bg4iligl0h24v42cka417w26zmcxrr4r6k8wdal1riwhgmi5"; depends=[BH gdtools Rcpp]; }; - svgtools = derive2 { name="svgtools"; version="1.0.0"; sha256="1d2vgczcp5q0ydhfvrq3sn6n21dr9gqh9bpiy35qbfhqvmahgwsp"; depends=[magick rsvg stringr xml2]; }; + svglite = derive2 { name="svglite"; version="2.0.0"; sha256="19ggknw5322yw7r1bzhw0bqggcrpn0qxddk7kblpqnra2zz2brkn"; depends=[cpp11 systemfonts]; }; + svgtools = derive2 { name="svgtools"; version="1.0.3"; sha256="1s9bqvzjh6rkc61lqgwjpg35vrd1rrnxvcfgqgh0qbs92s1fbnx8"; depends=[magick rsvg stringr xml2]; }; svmpath = derive2 { name="svmpath"; version="0.970"; sha256="19b5hfqqsh072l5mbkafm5pjd6qhyj20qd2vq6zl5jjmc45r72w1"; depends=[kernlab]; }; svmplus = derive2 { name="svmplus"; version="1.0.1"; sha256="08cfywrbaxyacqd3l75lysb23ahqbs80959iqkjbb125aafmhvni"; depends=[MASS Matrix quadprog]; }; + svplots = derive2 { name="svplots"; version="0.1.0"; sha256="0fa3mnsdaz85dy7rr6w454z516simj1zrf08sfbm05rp6jr3c7ws"; depends=[ggplot2]; }; svrpath = derive2 { name="svrpath"; version="0.1.2"; sha256="18h40555jmqpbsnhlwkvc5fl7d0r2bgscdv8amjvhjxmx9y952a2"; depends=[quadprog svmpath]; }; svs = derive2 { name="svs"; version="3.0.0"; sha256="1jn3dbaqpgydkwf9y7hq97nva26vvrpl9zmw2bw4ky1qgzgz1ypb"; depends=[gtools Matrix]; }; svyPVpack = derive2 { name="svyPVpack"; version="0.1-1"; sha256="15k5ziy2ng853jxl66wjr27lzc90l6i5qr08q8xgcs359vn02pmp"; depends=[survey]; }; - svyVGAM = derive2 { name="svyVGAM"; version="0.222-2"; sha256="1lr1hydxxjqc0wkppyr9km2aaq65azvx5spjkxxx1z41a1cjapah"; depends=[survey VGAM]; }; + svyVGAM = derive2 { name="svyVGAM"; version="1.0"; sha256="1dq6rmk3sqpgm7q1chsvwjhc2lfsrgd4isgpxc907w5waqk91n16"; depends=[survey VGAM]; }; svydiags = derive2 { name="svydiags"; version="0.3"; sha256="0xgizswdqs8cjac200sqv3ygvrnbcy74h92kgx4r6nv1fhlcljl3"; depends=[MASS Matrix survey]; }; swCRTdesign = derive2 { name="swCRTdesign"; version="3.1"; sha256="18ln02fnxkpjqi8a36wr2qr427hxrghkhfjx0384grmdg1mmkbf5"; depends=[]; }; swa = derive2 { name="swa"; version="0.8.1"; sha256="1zy1a6c17vmdkmkwp8vv3niww2zs1m0hylsa0b2cz68vfhnmpim4"; depends=[ggplot2 reshape ROCR]; }; swag = derive2 { name="swag"; version="0.1.0"; sha256="1w6schbj5gw7278krjzkcwafz3wv7vp7cfsvy17c0i1b5g3qqkpd"; depends=[caret Rdpack]; }; swagger = derive2 { name="swagger"; version="3.33.1"; sha256="1ldgmy5vjzd11z5yl5a518wkw6y0l469b2zf0lp12hk19jq6k0sj"; depends=[]; }; swamp = derive2 { name="swamp"; version="1.5.1"; sha256="1mj6cqrc19p07v051fg6ikhhbccsg2lvz7wjiakaswqqm0269843"; depends=[amap gplots impute MASS]; }; - swapClass = derive2 { name="swapClass"; version="1.0.1"; sha256="0wg6km261xdywakxi64dw4wwprbrkw217q4c6622z0mgm9sjgpym"; depends=[inline]; }; swatches = derive2 { name="swatches"; version="0.5.0"; sha256="1kivscgka8gn44rjj0s5sjan1s04znnyn0nd37a74zaik0hm8zs0"; depends=[colorspace httr pack stringr xml2]; }; swdft = derive2 { name="swdft"; version="1.0.0"; sha256="0529rw8nsl48hwiy741alvrzg5d5q1nhnjshrsfwchm5kdv0igva"; depends=[]; }; swdpwr = derive2 { name="swdpwr"; version="1.4"; sha256="0qwpkvxhkv9jf7n312jixf058h3l5hlpygr9cy6l2p148y79gcid"; depends=[]; }; sweep = derive2 { name="sweep"; version="0.2.3"; sha256="1705mcp9p5h50ifqjjwx61z5wl5izv889nxcgdkx1i0dlcr61l2a"; depends=[broom dplyr forecast lubridate rlang tibble tidyr timetk]; }; sweidnumbr = derive2 { name="sweidnumbr"; version="1.4.2"; sha256="0zzjvwd60w9b5ybsb72aqa42sx6al4ymr591j3zryxgpl6rms5rh"; depends=[checkmate lubridate stringr]; }; swephR = derive2 { name="swephR"; version="0.3.0"; sha256="0fk5wih3i5vpkcc9y1n30xwc1hyqgfgnad9jkdgdx0m31pn1y9j5"; depends=[Rcpp]; }; - swfscAirDAS = derive2 { name="swfscAirDAS"; version="0.2.1"; sha256="0z85gb9vxl0fn90axhdzdpvl00w5fxwl7hw9iv50bi1pjjbm830b"; depends=[dplyr lubridate magrittr readr rlang stringr swfscDAS swfscMisc tidyr]; }; - swfscDAS = derive2 { name="swfscDAS"; version="0.4.0"; sha256="0sjw3acf60yawmcwmql21im1q5lbn83jnblcxmj2az93abzbjqfl"; depends=[dplyr lubridate magrittr purrr readr rlang sf swfscMisc tidyr]; }; - swfscMisc = derive2 { name="swfscMisc"; version="1.3"; sha256="03wzjricpgf55yfwmj4vjcvz59yxcipfp4bsjddzw65glasa9d1s"; depends=[dplyr ggplot2 ggrepel magrittr mapdata maps reshape2 rlang spatstat tibble tidyr]; }; + swfscAirDAS = derive2 { name="swfscAirDAS"; version="0.2.2"; sha256="0xj2r0hv755kqjn4awkf16d24vkmfny6b1xa7ia07pdc25iggrgm"; depends=[dplyr lubridate magrittr readr rlang stringr swfscDAS swfscMisc tidyr]; }; + swfscDAS = derive2 { name="swfscDAS"; version="0.5.0"; sha256="1x1jv3vn8qsrdinm0yhpfyisxfwgw1bn0ykbf0dx8482n3lj2sjr"; depends=[dplyr lubridate magrittr purrr readr rlang sf swfscMisc tidyr]; }; + swfscMisc = derive2 { name="swfscMisc"; version="1.4.3"; sha256="1ywmi7m8kmd0jy6jkri70rdpqnb16h1mjy0km4c8rn4knmjy6fbi"; depends=[dplyr ggplot2 ggrepel kknn magrittr mapdata maps rlang sf spatstat_geom tibble tidyr]; }; swgee = derive2 { name="swgee"; version="1.4"; sha256="1a6zr4nkpj52b0rk01qbwzi8y0c798wlxzw69wyyv576k148rgfq"; depends=[gee geepack mvtnorm]; }; + swimplot = derive2 { name="swimplot"; version="1.2.0"; sha256="02w1l67hvz8gha8gcqxcvcr8g2azidn6bvw76h3k75p9rvq8sgpp"; depends=[dplyr ggplot2 tidyr]; }; swirl = derive2 { name="swirl"; version="2.4.5"; sha256="0cqyn2rnqfkb2wza4zdr1kcms5l0igbq79xh5i7765agdday2z9w"; depends=[digest httr RCurl stringr testthat yaml]; }; swirlify = derive2 { name="swirlify"; version="0.5.3"; sha256="1bpg6yz2adgspjlwsf2q83j1bq0iyvp9938smgc41861nsclngwr"; depends=[base64enc readr rmarkdown shiny shinyAce stringr swirl whisker yaml]; }; swissMrP = derive2 { name="swissMrP"; version="0.62"; sha256="1vy6h6c4v49zlsli77ilj4df8cfh67rqmki71v6j1aqw6kf3b649"; depends=[arm blme lme4 maptools sp]; }; - swissdd = derive2 { name="swissdd"; version="1.0.4"; sha256="19wv1vydxkd29s8ma01kgpf3p7msn00179h73qrxd7b1j9sniy97"; depends=[curl dplyr jsonlite magrittr purrr tibble tidyr]; }; swissparl = derive2 { name="swissparl"; version="0.2.1"; sha256="0181ls1gw68kfz3yqf8m2nwhah87i9m164rlbycy1kxq9adi93cs"; depends=[crayon dplyr ggplot2 httr jsonlite lubridate magrittr purrr stringr tibble tidyr]; }; switchcase = derive2 { name="switchcase"; version="0.1.1"; sha256="0h31nzyf7dzalgl65cw0k1fxylbmx78l45r5id2wcqdym23dv9a9"; depends=[]; }; switchnpreg = derive2 { name="switchnpreg"; version="0.8-0"; sha256="1vaanz01vd62ds2g2xv4kjlnvp13h59n8yqikwx07293ixd4qhpw"; depends=[expm fda HiddenMarkov MASS]; }; @@ -15637,9 +16259,8 @@ in with self; { swmmr = derive2 { name="swmmr"; version="0.9.1"; sha256="140sx0y00ngxsyn7n1l0aay7vk2jk8hf81aiwh46k761cpc5y28d"; depends=[dplyr purrr Rcpp readr tibble tidyr xts zoo]; }; sybil = derive2 { name="sybil"; version="2.1.5"; sha256="1biy1cc87g7adfglzp2mq6ca5sfp1ljq087id0xqdmrwz0650maq"; depends=[lattice Matrix]; }; sybilDynFBA = derive2 { name="sybilDynFBA"; version="1.0.2"; sha256="0351qlvyynygjf43q93gkqzzaff3v6gynvbks1ix1mank3afn226"; depends=[sybil]; }; - sybilSBML = derive2 { name="sybilSBML"; version="3.1.2"; sha256="1qvv6fr0zslfwlzx1zbd7rszh5x7zv3svvqrr8896inxh122mhzs"; depends=[Matrix sybil]; }; sybilccFBA = derive2 { name="sybilccFBA"; version="3.0.1"; sha256="1y94d6ajf0l492nrd8wsz3b6x724zcyhipasgyx65nx3sgha6yp8"; depends=[Matrix sybil]; }; - sybilcycleFreeFlux = derive2 { name="sybilcycleFreeFlux"; version="2.0.1"; sha256="0j1qmf5apb6k0ga5ki7wxbbq1k8x7kv8wcnf85zcx0117fjkxfng"; depends=[MASS Matrix sybil]; }; + sybilcycleFreeFlux = derive2 { name="sybilcycleFreeFlux"; version="2.0.2"; sha256="0s8yqzn7llzby5v1p7is7qv0m8dzwf14r3m32slf898nxrs131xr"; depends=[MASS Matrix sybil]; }; sylcount = derive2 { name="sylcount"; version="0.2-2"; sha256="0cncj0nszfw98i94sb3sqdzdxdqjs523kmbqxz6cvvph1s77aama"; depends=[]; }; syllabifyr = derive2 { name="syllabifyr"; version="0.1.1"; sha256="1z61afxx2bm37hxvv1fl3x7ibhkp3h1ivl3k9prqzsaw4j592vfx"; depends=[dplyr purrr stringr tibble tidyr]; }; sylly = derive2 { name="sylly"; version="0.1-6"; sha256="0f03k9d15fkym14y94jb7rkh228blc76jlm7pk229b44hcbh3mmm"; depends=[]; }; @@ -15658,20 +16279,20 @@ in with self; { synchrony = derive2 { name="synchrony"; version="0.3.8"; sha256="1zpxg4dkxnvafiyp0j00wig5ymj10bzfg2376x56rzpnabhg57hi"; depends=[]; }; synfd = derive2 { name="synfd"; version="0.1.3"; sha256="1h8vfrfw00449vjbj6z4y7m5p7rxzvqjcykyxw5sb473f63gr5px"; depends=[L1pack Rdpack]; }; synlik = derive2 { name="synlik"; version="0.1.2"; sha256="1pscfqg5x7wpq3vp1i7fy29dwa7cw5g3kzxinanwrwbcznv9nyms"; depends=[Matrix Rcpp RcppArmadillo]; }; - synoptReg = derive2 { name="synoptReg"; version="1.1.0"; sha256="0sqkx0zzj2hk59bjf5ma12rqdxy2dyszybr47ii6qvsiyp63ywcr"; depends=[dplyr ggplot2 lubridate magrittr metR raster rnaturalearth rnaturalearthdata RNCEP sf stringr tibble tidyr]; }; + synoptReg = derive2 { name="synoptReg"; version="1.2.1"; sha256="1v282ag4275p5lm6yvzwkpndrf4cnrpn0rw3v6mh5hxnb2pbmjl5"; depends=[dplyr ggplot2 kohonen lubridate magrittr metR raster rnaturalearth rnaturalearthdata RNCEP sf stringr tibble tidyr]; }; syntaxr = derive2 { name="syntaxr"; version="0.8.0"; sha256="1iik9b3x9jx7w31j7hyi3sixg30l5a6w40svhqj1xlchsk60yykn"; depends=[magrittr]; }; synthACS = derive2 { name="synthACS"; version="1.6.0"; sha256="0dwcx2c284fa9d0y7kpai3jpby3drriw9bxbjld8v6lz7af6d9mw"; depends=[acs data_table Rcpp]; }; - synthesis = derive2 { name="synthesis"; version="1.2.0"; sha256="0jw10g1zrrzq2fmy2dvlfvk4sv3bhmv7czdsscqrp5ly7jkr2cca"; depends=[MASS]; }; + synthesis = derive2 { name="synthesis"; version="1.2.2"; sha256="0kkhib5s7ibj22zwlhr95gazvinrrhnddbkdg9d1k9y9zxm8df6j"; depends=[MASS]; }; synthesisr = derive2 { name="synthesisr"; version="0.3.0"; sha256="0b50d5hfkscggn2f6h8wyljkar08r8cbc0a4l12f809w5hdnjc63"; depends=[stringdist]; }; synthpop = derive2 { name="synthpop"; version="1.6-0"; sha256="0yknpisl81r87afijnjz5za0j6nn135mhrbpa9dva3c0dzamnhms"; depends=[classInt foreign ggplot2 lattice MASS mipfp nnet party plyr polspline proto randomForest ranger rpart]; }; sys = derive2 { name="sys"; version="3.4"; sha256="11q4zmx62w44p1j34frwmrsp23mc7l4n354i0zyziw92yax8zy0p"; depends=[]; }; - sysfonts = derive2 { name="sysfonts"; version="0.8.2"; sha256="1gapsiva0vjd2myxgm1avav6my5x00rmy2hx0qll7dm7v1isznbv"; depends=[]; }; + sysfonts = derive2 { name="sysfonts"; version="0.8.3"; sha256="00kbazxw6zd1kakfshffdj928krca53bw9k78k0zar40mbqxiwd5"; depends=[]; }; sysid = derive2 { name="sysid"; version="1.0.4"; sha256="0fr9gf5yjin3zvz850z4r4pqc1r4mwx8d46sl64i4csdm9qnqagy"; depends=[bitops ggplot2 polynom reshape2 signal tframe zoo]; }; syslognet = derive2 { name="syslognet"; version="0.1.2.1"; sha256="0nwni2mn7w43pfasqa2dwy1l6r0ymlkwlsyd5q47fajdr8v1ir0q"; depends=[]; }; systemfit = derive2 { name="systemfit"; version="1.1-24"; sha256="180ah91i98gjswpbkkdjgnc2c9rz3pl5bw035iks92nd5vl6w5wz"; depends=[car lmtest MASS Matrix sandwich]; }; - systemfonts = derive2 { name="systemfonts"; version="0.3.2"; sha256="12hdvv66kkd3b4rs82blc3c4ifz2dw1048sqpkbz6vkk1zqpc53x"; depends=[cpp11]; }; + systemfonts = derive2 { name="systemfonts"; version="1.0.1"; sha256="15x7qx8iigkybgz6b6s66i3mh75vgynzpd50nw05wflfwzcv87a0"; depends=[cpp11]; }; systemicrisk = derive2 { name="systemicrisk"; version="0.4.2"; sha256="021ypw9fag5kmk2q041pj2jfzgfg640yda7wvh0yzdmg73p6fvsw"; depends=[lpSolve Rcpp]; }; - syt = derive2 { name="syt"; version="0.1.0"; sha256="1qagd67wznyc6sfvs22lw2lwnwap1hlpf92i0ck5aif514ysi886"; depends=[Matrix partitions]; }; + syt = derive2 { name="syt"; version="0.2.0"; sha256="1pfl3d6laa075z88fqgjnrsn21lgjsak0bjdws09b9knc0ifgfsz"; depends=[Matrix partitions]; }; syuzhet = derive2 { name="syuzhet"; version="1.0.6"; sha256="16iccqdbw02iw82nah6kwz3gwfghi864j2y698n4b9dyc386ijzv"; depends=[dplyr dtt NLP rlang textshape tidyr zoo]; }; tRophicPosition = derive2 { name="tRophicPosition"; version="0.7.7"; sha256="1j06rc5s6jpz8i116m98ygc75sx6lk8jd9gw6fb8q342mbbmqh8h"; depends=[coda data_table ggplot2 gridExtra hdrcde MCMCglmm plyr rjags]; }; tTOlr = derive2 { name="tTOlr"; version="0.2"; sha256="1fk33vp6y65mls1iczjf63wzj1rl1knbdcbd4rnqqfdcqhibb3p3"; depends=[lattice latticeExtra]; }; @@ -15682,27 +16303,28 @@ in with self; { tablaxlsx = derive2 { name="tablaxlsx"; version="1.2.4"; sha256="19yg8m264f1hjsi8b7zxjpbvlaz2jrxj2bd9nv95g52dvlysg4nk"; depends=[openxlsx]; }; table_express = derive2 { name="table.express"; version="0.3.1"; sha256="00f5xi2dkx1h0mv8ld3ds15w30d9vgvmjrldg43z7zskprshqsxx"; depends=[data_table dplyr magrittr R6 rlang tidyselect]; }; table_glue = derive2 { name="table.glue"; version="0.0.2"; sha256="01yskmc604jdy6givddm0nhr9ylf7p68v2xz1p2mqylhws1lszph"; depends=[glue stringi]; }; - table1 = derive2 { name="table1"; version="1.2.1"; sha256="0p671082fax91hcb063zvgm1r0xm82h0yb22z2y2s41wkha95y7v"; depends=[Formula htmltools knitr yaml]; }; + table1 = derive2 { name="table1"; version="1.4"; sha256="1smqmbdnvwjklc2bblpklz7hjzww71yc2lrksjhl6ibmd6fdpc9f"; depends=[Formula htmltools knitr yaml]; }; table1xls = derive2 { name="table1xls"; version="0.4.0"; sha256="0ixbshbp9hkcg12hj32vgb5bp0pj4rbc3i6g1xdg2zhqp7zanics"; depends=[XLConnect]; }; - tableHTML = derive2 { name="tableHTML"; version="2.0.0"; sha256="19sa5sda4v5dr449ip9z9ah5hdph9q6vb6zbs93jn4rpkvyijny3"; depends=[htmltools jpeg magrittr png shiny webshot]; }; + tableHTML = derive2 { name="tableHTML"; version="2.1.0"; sha256="01bffjqi2qs66w67l5nc0imqdcaf4cky930srkd2wmvvawv85kwc"; depends=[htmltools jpeg magrittr png shiny webshot]; }; tableMatrix = derive2 { name="tableMatrix"; version="0.82.0"; sha256="1sskijhbqakamrk2rv7v5zpjsdi8jw0jl2z96l0vhsvsiq0cz1c8"; depends=[data_table]; }; tableone = derive2 { name="tableone"; version="0.12.0"; sha256="0pjpsdizpvqn7anyg95d4i7sf6qyqh7svp4a5gsch0r3gmpw2p3a"; depends=[e1071 gmodels labelled MASS nlme survey zoo]; }; - tableplot = derive2 { name="tableplot"; version="0.3-5"; sha256="1jkkl2jw7lwm5zkx2yaiwnq1s3li81vidjkyl393g1aqm9jf129l"; depends=[]; }; tablerDash = derive2 { name="tablerDash"; version="0.1.0"; sha256="1mnp6lxa7d669r325aynq1n3f35r9sy4v1fvdh4cymbf33s8mkmm"; depends=[htmltools knitr shiny]; }; tables = derive2 { name="tables"; version="0.9.6"; sha256="1y0gnqd2q0gn1dr2nxdlsvyl4g5jnj9y9lx18bhvhrfzb5038j5w"; depends=[htmltools knitr]; }; tableschema_r = derive2 { name="tableschema.r"; version="1.1.1"; sha256="14cnbijxdhf7qbsiqbk8p516mfh9bgdbcg32vn5pycsp30k78b2h"; depends=[config future httr iterators jsonlite jsonvalidate lubridate purrr R6 RCurl rlist stringr urltools]; }; tablesgg = derive2 { name="tablesgg"; version="0.7-1"; sha256="0zzcml97a9q98a999sb9hjyrkickkymhsppkxhxax32yf1h5x2kr"; depends=[ggplot2 tables]; }; - tabr = derive2 { name="tabr"; version="0.4.4"; sha256="00fnvifq8r4brygdvaawsb3yn8akiqmcd0pwbr48c1141q1n4h9j"; depends=[crayon dplyr ggplot2 magrittr purrr tibble tidyr]; }; + tablet = derive2 { name="tablet"; version="0.2.7"; sha256="0nbay0yijmrrpf7h7djcxrqrlimysrn0ff8n1gkmg9b1cagbqbg7"; depends=[dplyr kableExtra rlang tidyr]; }; + tabnet = derive2 { name="tabnet"; version="0.1.0"; sha256="0bz6rba8sb84w3kdas0gxl5xvlk4s1iswd1bfdwpx2l7pfq50jq3"; depends=[glue hardhat magrittr progress rlang tibble torch vctrs]; }; + tabr = derive2 { name="tabr"; version="0.4.5"; sha256="1nkzbqy9nb6pd895glld009vmry5rnhd7h9q31s8xh97kwlwk9c2"; depends=[crayon dplyr ggplot2 magrittr purrr tibble tidyr]; }; tabshiftr = derive2 { name="tabshiftr"; version="0.1.2"; sha256="1b5x9mmc0dcd1nl82wf45xvls685vbqz2qimhx23c4ra55kxpz8n"; depends=[checkmate crayon dplyr magrittr purrr rlang stringr testthat tibble tidyr tidyselect]; }; tabuSearch = derive2 { name="tabuSearch"; version="1.1.1"; sha256="0396a8hla508na1hmyyhfbl8w10dbg810cln2xyhhvxi7rr223dj"; depends=[]; }; - tabularaster = derive2 { name="tabularaster"; version="0.6.6"; sha256="1kj86h358a578c2cv7raks0fzk5kfxwbv8hrgrvq0gb07y6m4qa7"; depends=[dplyr fasterize magrittr raster silicate spatstat tibble]; }; + tabularaster = derive2 { name="tabularaster"; version="0.7.0"; sha256="061nc82svcz37lvwsx549rn6s2q6x75wjs0j9k8zcvlzr5wyyfgi"; depends=[dplyr fasterize magrittr raster silicate spatstat_geom tibble]; }; tabularmaps = derive2 { name="tabularmaps"; version="0.1.0"; sha256="07i76n2fpl2ma6jl3zdbay0zmmaaxrxhv1368xm2d575br42nri4"; depends=[ggforce ggplot2 purrr rlang]; }; + tabulator = derive2 { name="tabulator"; version="1.0.0"; sha256="1dylmw5prwir3qj13lxkvlzq6j7r23y3gz1g0bjyanb0xmzgxn4k"; depends=[assertthat data_table dplyr magrittr purrr rlang stringr tibble tidyr]; }; tabulizer = derive2 { name="tabulizer"; version="0.2.2"; sha256="0zd5cfqwgirqchw1mvziscxvzl8pb1y6rbfywkn9i9pxfydkm5vi"; depends=[png rJava tabulizerjars]; }; tabulizerjars = derive2 { name="tabulizerjars"; version="1.0.1"; sha256="005n2gyzzmq8h0mpj8xs6ri6llzwag7nqzpm4vnzp81vwy8kmf92"; depends=[rJava]; }; tabulog = derive2 { name="tabulog"; version="0.1.1"; sha256="0n6qjd7kmvxx5na71f358pw3bbwa69vh8qjkrs5mkb3izxabcq67"; depends=[yaml]; }; tacmagic = derive2 { name="tacmagic"; version="0.3.1"; sha256="1rayyavjppi5dbcmb4yb2nf85ch2li766sdllfsirb19bb3d4c2d"; depends=[pracma R_matlab]; }; tactile = derive2 { name="tactile"; version="0.2.0"; sha256="0jjfbsadxbf9s6vzi82rw5qa6hdc8iz4jci9xpbzwrjkb90dzd08"; depends=[gridExtra lattice latticeExtra MASS RColorBrewer]; }; - tadaatoolbox = derive2 { name="tadaatoolbox"; version="0.17.0"; sha256="1mf6mzv84da7f87xy301xpb3rrjrhx1kximqi0310y291v4si13b"; depends=[broom car DescTools ggplot2 magrittr pixiedust viridis]; }; tagcloud = derive2 { name="tagcloud"; version="0.6"; sha256="04zrh029n8pjlxlr6pdd7xhqqhavbrj3fhvhj6ygzlvi2jslxnwl"; depends=[RColorBrewer Rcpp]; }; tailloss = derive2 { name="tailloss"; version="1.0"; sha256="0lmjgjs6d94b70i10vx66fyvlxm5swwqbcjsnqa3lmldzz6m4jc1"; depends=[MASS]; }; taipan = derive2 { name="taipan"; version="0.1.2"; sha256="192sy5pgq74vs31p7jfn6svdzf9mk9ybppzhp1rlki1bagmm5f1r"; depends=[shiny]; }; @@ -15710,36 +16332,41 @@ in with self; { tanaka = derive2 { name="tanaka"; version="0.1.3"; sha256="1x5czib9vqpxbr61if1rnlyrld6gx2zf22jz5rcagb8x3bxmd5g6"; depends=[isoband raster sf]; }; tangles = derive2 { name="tangles"; version="0.8.1"; sha256="06a5hn5hkvgr6pcjz3n0vi1zwmv00wypi5f62agqh8mas80v44vh"; depends=[digest raster sp]; }; tangram = derive2 { name="tangram"; version="0.7.1"; sha256="0p0hrn3jv1l00nsjqa0j9yv4982r08fwgsj01pc06vmipg87kjiy"; depends=[base64enc digest htmltools knitr magrittr R6 stringi stringr]; }; - tapkee = derive2 { name="tapkee"; version="1.1"; sha256="1s8710m4drhnycfv27bv1w7vqc99dvbcn8zxkahq0lrsx7q8i5mz"; depends=[]; }; + tapkee = derive2 { name="tapkee"; version="1.2"; sha256="1xgz2cv5jb1hdnl8y8zs4x6p1dk1vv8zbs4wfsj61gpfyf9gkh4f"; depends=[]; }; + tapnet = derive2 { name="tapnet"; version="0.3"; sha256="1fjg98m19iwbzijs5b5l4ssrbx1shv1hmgn1166cbni9y76m44sh"; depends=[ape bipartite MPSEM phytools vegan]; }; targeted = derive2 { name="targeted"; version="0.1.1"; sha256="09y4lhwfh7rzk343hc2pjr334x3978q6vyhsvpana0db8plas7aw"; depends=[futile_logger lava optimx Rcpp RcppArmadillo]; }; - tashu = derive2 { name="tashu"; version="0.1.0"; sha256="04xvmbcwi84zg1pqw21nmrbnkyx184wc200vl1vhmwxggq1i60np"; depends=[dplyr drat ggplot2 lubridate plyr randomForest RColorBrewer reshape2]; }; + targets = derive2 { name="targets"; version="0.4.2"; sha256="0vrdgikgxhm0gvcrs4qvlp3n63jvkkg54jhsjaqnyyimdhv15wm4"; depends=[callr cli codetools data_table digest igraph R6 rlang tibble tidyselect vctrs withr yaml]; }; + tashu = derive2 { name="tashu"; version="0.1.1"; sha256="0rirjalridr79a7j3qz80l2vp6m8paqr97ac241b58756k7nr5j7"; depends=[dplyr drat ggplot2 lubridate plyr randomForest RColorBrewer reshape2]; }; + tastypie = derive2 { name="tastypie"; version="0.0.3"; sha256="1xv327nkn6rmzljy21yzahj2h82sl39dmia0qaj1fkcp8yfjqsi2"; depends=[dplyr ggplot2 RColorBrewer scales shadowtext tibble]; }; tatest = derive2 { name="tatest"; version="1.0"; sha256="1yd9pdpdhxwpllnj5wxa7ly29qiw8qywx9lx0w3nizczlx35fgjy"; depends=[]; }; tatoo = derive2 { name="tatoo"; version="1.1.1"; sha256="0w9rm6cnc1mpfyklb8njzjwph2c38niinzxiflrqjqfdp7nd8281"; depends=[assertthat colt crayon data_table magrittr openxlsx stringi withr]; }; tau = derive2 { name="tau"; version="0.0-23"; sha256="05qwvwmx631w19sxaw7jw5dgrdnj134f70l6rmfh3rpblpdy8509"; depends=[]; }; tauturri = derive2 { name="tauturri"; version="0.3.0"; sha256="014301f5mzy6vblqzb61bxjv46kdynmmrxjpxyvk01w1k8wkwfcn"; depends=[httr magrittr plyr purrr tibble]; }; taxa = derive2 { name="taxa"; version="0.3.4"; sha256="09mnszr8pdjxv680pbyp12wwvfb2iqpnqh3hmds05nisl8g5307x"; depends=[crayon dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr taxize tibble tidyr]; }; - taxadb = derive2 { name="taxadb"; version="0.1.0"; sha256="0nns9jpjawla90f12gi90562llb2j0pdhwlvy62mgcg0ghr39fgr"; depends=[arkdb curl DBI dbplyr dplyr jsonlite magrittr memoise progress rappdirs readr rlang RSQLite stringi tibble]; }; + taxadb = derive2 { name="taxadb"; version="0.1.3"; sha256="1ai2p58h75170wh8701dpyjb9cx5lfzx5xpq33l4w8pybh24zaab"; depends=[arkdb contentid curl DBI dbplyr dplyr duckdb jsonlite magrittr memoise progress rappdirs readr rlang RSQLite stringi tibble]; }; + taxalight = derive2 { name="taxalight"; version="0.1.3"; sha256="19phg5pwij2m4qjrjbbsxzs188xj1wva1n60i0p3m974xpjq7jbf"; depends=[contentid thor]; }; taxize = derive2 { name="taxize"; version="0.9.99"; sha256="0738fzckbwkgf21vranxhcfjq487rp3kjdnz2gfvdd1dm21jfp8s"; depends=[ape bold cli conditionz crayon crul data_table foreach jsonlite natserv phangorn R6 ritis rotl rredlist tibble wikitaxa worrms xml2 zoo]; }; - taxizedb = derive2 { name="taxizedb"; version="0.2.2"; sha256="005z4chlhbi5kai7yhy00r3mvvsr0y8d462z4lj7fa6vzcbbd9vw"; depends=[curl DBI dbplyr dplyr hoardr magrittr readr rlang RSQLite tibble]; }; - taxlist = derive2 { name="taxlist"; version="0.2.0"; sha256="1x4s8b8x5jxx7h2ml06l8s7hsgr0jbqvjw4gbxkrczgg957nnrfz"; depends=[foreign stringdist taxa taxize vegdata]; }; - taxonomizr = derive2 { name="taxonomizr"; version="0.5.3"; sha256="0hxvcbyr5b3sxqy5kw1q17qx7c2q90a6x79r9bmjn6c2lnrqn83i"; depends=[data_table R_utils RSQLite]; }; - taxotools = derive2 { name="taxotools"; version="0.0.43"; sha256="0msaqkvyhb292bsv84bw55xxmxhs5nyk31ikjz229q3xhv0zmnzw"; depends=[plyr sqldf taxize wikitaxa]; }; + taxizedb = derive2 { name="taxizedb"; version="0.3.0"; sha256="1d7wz6df624263myq4rlvr3mhzhhhdglrrs7f44j201z4f536a2z"; depends=[curl DBI dbplyr dplyr hoardr magrittr readr rlang RSQLite tibble]; }; + taxlist = derive2 { name="taxlist"; version="0.2.1"; sha256="0nank4knd0ak3z2xnayyfr0cd3kgg363xd25c6f2d7q6cg5jkpjj"; depends=[foreign stringdist taxa taxize vegdata]; }; + taxonomizr = derive2 { name="taxonomizr"; version="0.7.1"; sha256="0kp2fxld48hi738w1wvg8h0zf1gsj7y3dr32qqgx6v9n82lssdls"; depends=[data_table R_utils RSQLite]; }; + taxotools = derive2 { name="taxotools"; version="0.0.79"; sha256="1q69dh1ifa7mc8y3bdgvvg97s9prflh6mczqr4clxnsysd3xhafs"; depends=[plyr sqldf stringdist stringr taxize wikitaxa]; }; tbart = derive2 { name="tbart"; version="1.0"; sha256="0m8l9ic7na70il6r9ha0pyrjwznbgjq7gk5xwa5k9px4ysws29k5"; depends=[Rcpp sp]; }; tbd = derive2 { name="tbd"; version="0.1.0"; sha256="1wmfy3p82gckhfsslxzapryfygmircii7x24j6ysfyx52gy8iwf5"; depends=[numDeriv]; }; tbdiag = derive2 { name="tbdiag"; version="0.1"; sha256="1wr2whgdk84426hb2pf8iiyradh9c61gyazvcrnbkgx2injkz65q"; depends=[]; }; - tbl2xts = derive2 { name="tbl2xts"; version="1.0.2"; sha256="0pqsrrv5qdwfrz3dd1b3idbk39gijwmm7k2xrakzdisswfxwggyd"; depends=[dplyr rlang tibble xts zoo]; }; - tbm = derive2 { name="tbm"; version="0.3-3"; sha256="16yqvjq6gq1k165zb9ldvdqz9wn9p6gp4y44z67iivg0klfmwmfz"; depends=[basefun coneproj mboost mlt sandwich variables]; }; + tbl2xts = derive2 { name="tbl2xts"; version="1.0.4"; sha256="1h54yhwbmlzgii202dcrz336d790374p213f1ba6rlm5syad88v9"; depends=[dplyr rlang tibble xts zoo]; }; + tbm = derive2 { name="tbm"; version="0.3-4"; sha256="1n2lql8h4ikm49l7cn9n3ybnivhgx373hmxkarwm4an4d0ifri0z"; depends=[basefun coneproj mboost mlt sandwich variables]; }; tbma = derive2 { name="tbma"; version="0.1.0"; sha256="066p3szfayyimwblghm1lipjf21xgscq1fzbzpqz16lqjpb99ni1"; depends=[data_table ranger RcppRoll zoo]; }; tboot = derive2 { name="tboot"; version="0.2.1"; sha256="0pijvs5k28ndnkyy4lwln6wlcag0pnbndg33c5djyaxhns77faz2"; depends=[kernlab quadprog]; }; tbrf = derive2 { name="tbrf"; version="0.1.5"; sha256="1mxfvgb18a62igdh3af4m8x6fl69s25j4x7isd70w744w6jvch3h"; depends=[boot dplyr lubridate purrr rlang tibble tidyr]; }; - tcR = derive2 { name="tcR"; version="2.3.2"; sha256="0rsz6mbqjwin28p1pmal38v5jsgavbs0n362kng5zq8yg3l4z718"; depends=[data_table dplyr ggplot2 gridExtra gtable igraph Rcpp reshape2 scales stringdist]; }; tcensReg = derive2 { name="tcensReg"; version="0.1.7"; sha256="07wwn65c4q2ngafxhdd9vl0y1wambfy158mf38skxm295yidd05n"; depends=[maxLik Rdpack]; }; tcftt = derive2 { name="tcftt"; version="0.1.0"; sha256="0p5ln0sl0fasdn49252g4lvwgwajgl7lh33a4r073ib54hxbj7bk"; depends=[]; }; tcgsaseq = derive2 { name="tcgsaseq"; version="2.0.5"; sha256="1hfs3ppva7hi6h7965jfpgjp76ygaibmymkhxihrs8ag2pxp4skv"; depends=[CompQuadForm ggplot2 GSA KernSmooth pbapply statmod]; }; - tcl = derive2 { name="tcl"; version="0.1.0"; sha256="1ssqx50ii6j2y5n2nxn5ndp20nrjss0xf0fqp8aiwlgnm3d1zggn"; depends=[eRm lattice MASS Matrix numDeriv]; }; + tci = derive2 { name="tci"; version="0.1.0"; sha256="0fpvkj0542v20r3zy5n72rl8nwzhwnbcabn7yif91vxa00hqr7w9"; depends=[ggplot2 gridExtra mvtnorm reshape truncnorm]; }; + tcl = derive2 { name="tcl"; version="0.1.1"; sha256="01klrzvw7vc0iwqpmcikgqm8jx3g7536r5f8gb6vwcik912maxnl"; depends=[colorspace eRm lattice ltm MASS Matrix numDeriv psych psychotools]; }; tcltk2 = derive2 { name="tcltk2"; version="1.2-11"; sha256="1ibxld379600xx7kiqq3fck083s8psry12859980218rnzikl65d"; depends=[]; }; tclust = derive2 { name="tclust"; version="1.4-2"; sha256="1nb5iky4kc832627jf28lzj19wrvgwg5da6fyl3kyf0npmyx1p4m"; depends=[]; }; tcpl = derive2 { name="tcpl"; version="2.0.2"; sha256="0xic4jy8ldawmkvvwckiyy57ai5wif9yn7hyfndbxr6mvjl3rbbc"; depends=[data_table DBI numDeriv RColorBrewer RMySQL sqldf]; }; + td = derive2 { name="td"; version="0.0.2"; sha256="19lpzby4wqsg22pimzisi9jm2xipvyhd1kaniazmclk3gvjnj23y"; depends=[RcppSimdJson]; }; tdROC = derive2 { name="tdROC"; version="1.0"; sha256="137j1m9pysjcz1gsfcym0438by3c7na21ccjlqf7xfccr1y8k2k6"; depends=[survival]; }; tdaunif = derive2 { name="tdaunif"; version="0.1.0"; sha256="0a24lqiimp54fmj4zi7bakxral8ny60n25h9arwl6m00c7cn98pl"; depends=[]; }; tdigest = derive2 { name="tdigest"; version="0.3.0"; sha256="17axsir4xig3vm3sc2gziy9n0p80b14vg52nwys23bzkfp0n63bm"; depends=[magrittr]; }; @@ -15756,8 +16383,8 @@ in with self; { telefit = derive2 { name="telefit"; version="1.0.3"; sha256="0z6dr4ni00dyagbkzr3c7l4h2g23w3bfj99a9755vmrzyy6r45iq"; depends=[abind coda cowplot dplyr fields foreach ggplot2 gtable itertools mvtnorm raster Rcpp RcppArmadillo RcppEigen reshape2 scales scoringRules sp stringr]; }; telegram = derive2 { name="telegram"; version="0.6.0"; sha256="02wwa115f0vz2d9y4nf01397hjkpc3cv2gdl47snrajrm41gji7y"; depends=[curl httr jsonlite R6]; }; telegram_bot = derive2 { name="telegram.bot"; version="2.4.0"; sha256="1bvfnr6k0zxdawrf63yh8wj9hcgq1xvy791xbqhiy0isaa86yfw9"; depends=[curl httr jsonlite R6]; }; + telemac = derive2 { name="telemac"; version="0.1.0"; sha256="13wdhaiw9d7rzq5hb4k7grkfkngqwkgyw3g76j8si2jfkw6hhwwd"; depends=[dplyr fs gstat lubridate magrittr purrr raster Rcpp rlang sf sp stringr sys tidyr tidyselect]; }; tempR = derive2 { name="tempR"; version="0.9.9.16"; sha256="0kwrjpfij36dl98j5x09hp7bzf5v17zxdjzqhjd2sn3xsdf0z5a1"; depends=[]; }; - tempcyclesdata = derive2 { name="tempcyclesdata"; version="1.0.1"; sha256="0hciachv59kjpjs119r4z24jskzgnassi1yjg3cgl2r0hyglxxc3"; depends=[]; }; tempdisagg = derive2 { name="tempdisagg"; version="1.0"; sha256="1n1ng7xki4syy305gsclz7wrqb48vkjw3la0vxs975apv1mc4pzr"; depends=[]; }; temperatureresponse = derive2 { name="temperatureresponse"; version="0.2"; sha256="1id3wjzfs132hj8cm7gpf105qaay9dff07ixah9rmn5sk6si0zmq"; depends=[AICcmodavg broom dplyr minpack_lm numDeriv rootSolve]; }; templates = derive2 { name="templates"; version="0.3.0"; sha256="0xnzj3cvhw1r7zfqaijbfdyclka61jwixcdh05a5z9qwgv0076sh"; depends=[dat magrittr stringr]; }; @@ -15767,29 +16394,31 @@ in with self; { tensorA = derive2 { name="tensorA"; version="0.36.2"; sha256="19wwh654qlja4z1n7afjpzsrrm53p8ddysa2vra5mdnkddb4g2cf"; depends=[]; }; tensorBF = derive2 { name="tensorBF"; version="1.0.2"; sha256="1dw1a6xqcsl4isbzbfiplgqq5nak5n9ffzm23mzzmkh1r1a8kl1y"; depends=[tensor]; }; tensorBSS = derive2 { name="tensorBSS"; version="0.3.7"; sha256="14c2c551k3x3lwjh4gf0pqqhjfb8v3f6chzq9kgjqrmy76ax185w"; depends=[fICA ggplot2 ICtest JADE Rcpp RcppArmadillo tensor tsBSS]; }; - tensorflow = derive2 { name="tensorflow"; version="2.2.0"; sha256="0dz47npinbz198h1ps4wap7x9dvw2vrgiw867wj1h3xkjs2dfv5m"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; }; + tensorTS = derive2 { name="tensorTS"; version="0.1.1"; sha256="10avj8f7xksknlblfzk4i9znswfi3mnsw3v7yd5cs3mqzhsaws11"; depends=[abind expm MASS Matrix pracma rTensor tensor]; }; + tensorflow = derive2 { name="tensorflow"; version="2.4.0"; sha256="0z10lwrmf77m7ncpq2gdrv18m5wafk29x65l2q4ppsaxpkrc03k7"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; }; tensorordinal = derive2 { name="tensorordinal"; version="0.2.0"; sha256="03xnwq6v5vcvgxd9acsqplbh1qr261yc0hybfkzss4rfns0lc85l"; depends=[MASS pracma rTensor]; }; tensorr = derive2 { name="tensorr"; version="0.1.1"; sha256="18xdvp328h96jn8y1iayxh7cyz2s8j5nn43nq18pyaxq271hkfyh"; depends=[assertive_base assertive_properties assertive_types Matrix purrr]; }; tensorregress = derive2 { name="tensorregress"; version="3.0"; sha256="1dlxdc5jgfqzs6jzgirxqdigmcr3yr20ikbvd2c9b3y41cpsl11d"; depends=[MASS pracma speedglm]; }; + tensorsign = derive2 { name="tensorsign"; version="0.1.0"; sha256="0jk34pns3a8mclhw4wcv3yib8dqbg07jl730x4ymy2hylvlaxp4q"; depends=[Matrix rTensor]; }; tensorsparse = derive2 { name="tensorsparse"; version="3.0"; sha256="0xx003nh5bi87cbsqb7ikpcs4yhjhphh7pybzzas44qkwbn4fn1k"; depends=[]; }; tensr = derive2 { name="tensr"; version="1.0.1"; sha256="1z6b3ra7fgn88mxbhsq65x3frj5j7p17n119s9kbw7sg9y633vfx"; depends=[assertthat]; }; tergm = derive2 { name="tergm"; version="3.7.0"; sha256="1prmqrns5cikx3w25rki7v08qs0zysplqz65ixzi54d6pmhb3lmg"; depends=[coda ergm MASS network networkDynamic nlme robustbase statnet_common]; }; tergmLite = derive2 { name="tergmLite"; version="2.2.1"; sha256="1fi379vginmgry4yhzd43lzrkn6vh44hrfcgdzgyxrf16rj0v617"; depends=[ergm network Rcpp statnet_common tergm]; }; - term = derive2 { name="term"; version="0.3.0"; sha256="1sbnx9bwrz27bmni44blpkh1qb7nhh5brj71g8xy4yxh47yzsw9f"; depends=[chk extras lifecycle purrr rlang universals vctrs]; }; + term = derive2 { name="term"; version="0.3.1"; sha256="1aqw4l0cb5ksxa2dd0hd01y4kkklpz0j5mrjq96n6gpr8mzkp97m"; depends=[chk extras lifecycle purrr rlang universals vctrs]; }; ternvis = derive2 { name="ternvis"; version="1.2"; sha256="057i6i3ygxrin0npc18gsg3dpdldzafyb5sr6lix5mhy6b09lkxf"; depends=[dichromat maps quadprog]; }; - terra = derive2 { name="terra"; version="0.9-11"; sha256="0pkm09by7l8wlpgxzx6qj3jj2d2pmcdj1bl46f4f7459ydl3d51r"; depends=[raster Rcpp]; }; + terra = derive2 { name="terra"; version="1.2-5"; sha256="0wmrb75y271xdx781xql0dx702ghnj4d2i2zr9375kqjbwgx9nad"; depends=[raster Rcpp]; }; terrainmeshr = derive2 { name="terrainmeshr"; version="0.1.0"; sha256="1xab6wzq2izzdvsss1rlgp5m3cn45naxhymq6cglipj0fd792jbr"; depends=[Rcpp]; }; + terrainr = derive2 { name="terrainr"; version="0.4.0"; sha256="0bx5vp12ydbmkb98zc4ls4rkzmdggjygkz9l9xs15kmdxkrl1sxj"; depends=[base64enc gdalUtils ggplot2 httr magick png raster sf units]; }; tesseract = derive2 { name="tesseract"; version="4.1"; sha256="1a7cf48n7hdd6inqz23ifqhq6kx6wxri34a79ns2vxaj6f4llxf0"; depends=[curl digest pdftools rappdirs Rcpp]; }; test2norm = derive2 { name="test2norm"; version="0.1.1"; sha256="11by5a1j6613akxj1nc16r07jfwxr1izkpvymr9yycnddiqyp42c"; depends=[mfp]; }; testDriveR = derive2 { name="testDriveR"; version="0.5.1"; sha256="0wjdqvsyv33fsg1lljp9m0bhz38mpfgpgickgj4zdspc9x6lbnv6"; depends=[]; }; testassay = derive2 { name="testassay"; version="0.1.1"; sha256="1gc35s5an0cpvadwx4bswy5lzcp01az3gnkjhvph6sm3pi3xjxm7"; depends=[]; }; - testcorr = derive2 { name="testcorr"; version="0.1.2"; sha256="0vwbmvhdmimwhn9gyki5khsvk2yw9ik9kjgxhbr4vy3mm3ly4zqb"; depends=[assertthat forcats ggplot2 knitr reshape2 scales]; }; + testcorr = derive2 { name="testcorr"; version="0.2.0"; sha256="0bqhf4p4csyd430240d8gh09axpz3h108fh78sbgpyqdhiq3d1fh"; depends=[forcats ggplot2 knitr reshape2 scales]; }; testequavar = derive2 { name="testequavar"; version="0.1.2"; sha256="12qfy53rkrasxphcfmch5bmdlvlybd27jfg3azsi3fg4zk4qgdw2"; depends=[]; }; tester = derive2 { name="tester"; version="0.1.7"; sha256="1x5m43abk3x3fvb2yrb1xwa7rb4jxl8wjrnkyd899ii1kh8lbimr"; depends=[]; }; - testextra = derive2 { name="testextra"; version="0.1.0.1"; sha256="166lg012hgk5n4zp92dagx01bjhpkjgc5i40x9fc9nfjby0wrc0s"; depends=[assertthat parsetools pkgcond postlogic purrr rlang stringi testthat]; }; testforDEP = derive2 { name="testforDEP"; version="0.2.0"; sha256="1mgzhj8b35r5cm4bl0nnyxj0h7rwd28d17qvgvaky2kvm2r83cf9"; depends=[Hmisc minerva Rcpp]; }; - testit = derive2 { name="testit"; version="0.12"; sha256="12af6n3bbqnsxmsr1qyjdhypn062n3mxaikrd9dqm9p7y09gkkcs"; depends=[]; }; - testthat = derive2 { name="testthat"; version="3.0.1"; sha256="1l1s4jgmgbsf711ma5i58ssgkz98an7hijcxvwfz314nf5fc8zr9"; depends=[brio callr cli crayon desc digest ellipsis evaluate jsonlite lifecycle magrittr pkgload praise processx ps R6 rlang waldo withr]; }; + testit = derive2 { name="testit"; version="0.13"; sha256="104dcxdmzgj340mwk4lpw1y6j1xc4rv4a2v09ckx3nvbmdl73m4h"; depends=[]; }; + testthat = derive2 { name="testthat"; version="3.0.2"; sha256="03sbk36vrjhzfap6a9czxw93r7h06rh3mb01inbrhrh5r2pd00qq"; depends=[brio callr cli crayon desc digest ellipsis evaluate jsonlite lifecycle magrittr pkgload praise processx ps R6 rlang waldo withr]; }; testthis = derive2 { name="testthis"; version="1.1.1"; sha256="0csragn695698dpkr9d3md0g81bzpy5mybd0jik669q9cs8sdzh2"; depends=[assertthat devtools fs magrittr pkgload rprojroot stringi testthat usethis]; }; testtwice = derive2 { name="testtwice"; version="1.0.3"; sha256="06fr13ww2wqk753p0cnl1ldn3nqrvdfnz0lgkpldcn0xwiwjh2x2"; depends=[mvtnorm]; }; tetraclasse = derive2 { name="tetraclasse"; version="0.1.21"; sha256="1cl2cah0xi6x3rvvdy56iszai6rkbxc1w3x13v0l1z1nryff7c6a"; depends=[dplyr FactoMineR ggplot2 ggrepel magrittr reshape2 tibble tidyr]; }; @@ -15801,13 +16430,14 @@ in with self; { text2speech = derive2 { name="text2speech"; version="0.2.13"; sha256="0c0h4yfp1gzaf4snav84iy5m0fx8az0pw1h2s33239dxkwcff893"; depends=[aws_signature dplyr googleAuthR googleLanguageR httr knitr magrittr mscstts tuneR]; }; text2vec = derive2 { name="text2vec"; version="0.6"; sha256="0r75cv77x2zm1z66s95hic71dpbqmybz39n48q6mz7gfd3m7312y"; depends=[data_table digest lgr Matrix mlapi R6 Rcpp rsparse stringi]; }; textTinyR = derive2 { name="textTinyR"; version="1.1.3"; sha256="0z9k978yk54zxrrjajcb0nanfhfpxm2bq2vbmk6w5s194da6y3xl"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; + textTools = derive2 { name="textTools"; version="0.1.0"; sha256="1d9j1bj17ki169h4lmlz2b2c2m60q6b95prjscz346lc4vw5160a"; depends=[data_table]; }; textcat = derive2 { name="textcat"; version="1.0-7"; sha256="1m31alkzy13acgf4ahnzpbyazflhpmry369vqdvn5f86wcsls833"; depends=[slam tau]; }; textclean = derive2 { name="textclean"; version="0.9.3"; sha256="0kgjh6c4f14qkjc4fds7q7rpf4nkma3p0igm54fplmm3p853nvrz"; depends=[data_table english glue lexicon mgsub qdapRegex stringi textshape]; }; textdata = derive2 { name="textdata"; version="0.4.1"; sha256="096gafbbh48yz4zbakv91cfd75kv8dg4p361s50rfqqjz57192fx"; depends=[fs rappdirs readr tibble]; }; texteffect = derive2 { name="texteffect"; version="0.3"; sha256="1qcbr18h3vakh6ymw4axzqcqrpss6z68a592xl879b82l2nlq8a7"; depends=[boot ggplot2 MASS]; }; textfeatures = derive2 { name="textfeatures"; version="0.3.3"; sha256="0x67kms7ipsadymc9jwja7wymav8y9kc5sbmp2vw4n4l89n32raa"; depends=[dplyr purrr rlang text2vec tfse tibble tokenizers]; }; textgRid = derive2 { name="textgRid"; version="1.0.1"; sha256="1wi5vq5f7ixhz39l5hqi2jlmjjacx4lyrs4h8xfbd47pj6g16lc6"; depends=[]; }; - textile = derive2 { name="textile"; version="0.1.2"; sha256="067zli6sl7bp9843spgx47hmw55aq61yinqw1lqifmrpk7b0ywk5"; depends=[]; }; + textile = derive2 { name="textile"; version="0.1.4"; sha256="069gb0j8ym44j1wk05xd3sixbvpxhhnhwax2gvyb9kbh5b99qpi6"; depends=[]; }; textir = derive2 { name="textir"; version="2.0-5"; sha256="0ban5qiinlxizqpcgafv4b5gwxlil6jdfarjd6l1m48awxh3mlnb"; depends=[distrom gamlr Matrix]; }; textmineR = derive2 { name="textmineR"; version="3.0.4"; sha256="1388blqxziqzjipys6icdifnnzgxvm0w3yr9jihl32ldd701rvvw"; depends=[gtools magrittr Matrix Rcpp RcppArmadillo RcppProgress RSpectra stopwords stringr text2vec]; }; textometry = derive2 { name="textometry"; version="0.1.4"; sha256="17k3v9r5d5yqgp25bz69pj6sw2j55dxdchq63wljxqkhcwxyy9lh"; depends=[]; }; @@ -15818,14 +16448,14 @@ in with self; { textreg = derive2 { name="textreg"; version="0.1.5"; sha256="0h44z5hyndnvzd9axix7gpmhbdx347dfgxw9r8w38kyw6dklbjy6"; depends=[NLP Rcpp tm]; }; textreuse = derive2 { name="textreuse"; version="0.1.5"; sha256="1mva0f6pk0kpfw0vf90qw3a25f1i3imdhk2s7hxyzans0z2237jd"; depends=[assertthat BH digest dplyr NLP Rcpp RcppProgress stringr tibble tidyr]; }; textshape = derive2 { name="textshape"; version="1.7.1"; sha256="02111kj3kka84mpx7s19bjna9cas8diw5fxz51v5ggz0ldswa5pa"; depends=[data_table slam stringi]; }; - textshaping = derive2 { name="textshaping"; version="0.2.1"; sha256="0fv291fc97s0wjdzn126sbi7vcsp3yl0b501n2xlkgh5ijraxpq8"; depends=[cpp11 systemfonts]; }; + textshaping = derive2 { name="textshaping"; version="0.3.3"; sha256="0yl3cv6r8k27h4lzbrsikjydhz94skdjmxx4zqzihvb7h3jfnlpn"; depends=[cpp11 systemfonts]; }; textstem = derive2 { name="textstem"; version="0.1.4"; sha256="1pbhi5ia3w16vsix2x3if51zd2v9bcv0j4lj9hfikgq1yz9zxmw2"; depends=[dplyr hunspell koRpus koRpus_lang_en lexicon quanteda SnowballC stringi textclean textshape]; }; - textutils = derive2 { name="textutils"; version="0.2-0"; sha256="06w0d12l7g4z3m278x5ap0jxm2y1h6ssj4igfcxk7j8k5hy89l80"; depends=[]; }; + textutils = derive2 { name="textutils"; version="0.2-1"; sha256="07grvvhs62caa37rav1v37816x6pdk0m5nd4isiw00966ydwy9ch"; depends=[]; }; tfCox = derive2 { name="tfCox"; version="0.1.0"; sha256="06mbiz1jwp8mv5dbwyvdvy1wpp8s3xp9hhsm94vrbvjaxg680g28"; depends=[Rcpp survival]; }; tfaddons = derive2 { name="tfaddons"; version="0.10.0"; sha256="16adig97qmafval6i29pqdinsgbwjz2isajxdx1xvbf1mrawkmz0"; depends=[keras purrr reticulate rstudioapi tensorflow]; }; tfarima = derive2 { name="tfarima"; version="0.1.1"; sha256="1hj8xablhmq7mhwx5xj6m8m5zl53big1cp08x808180ihif2zhlk"; depends=[numDeriv Rcpp RcppArmadillo zoo]; }; tfautograph = derive2 { name="tfautograph"; version="0.2.0"; sha256="1jpimmlsihr78v56v9mp51grmvwa198a1inahihk3yj02wzfqizj"; depends=[reticulate tensorflow]; }; - tfdatasets = derive2 { name="tfdatasets"; version="2.2.0"; sha256="0d85fdji2ip0h76vhax9z910vib2nilmpjk9y9525f4hc0bm7kss"; depends=[generics magrittr reticulate rlang tensorflow tfestimators tidyselect]; }; + tfdatasets = derive2 { name="tfdatasets"; version="2.4.0"; sha256="1026465g1arr7hpmbgagsa0vzsi96kpvypaz95nhb6923al3yzww"; depends=[generics magrittr reticulate rlang tensorflow tidyselect vctrs]; }; tfdeploy = derive2 { name="tfdeploy"; version="0.6.1"; sha256="1vbxyvmzaafbwp1pmvzn16zyl4nz85787m79gn7iazh9zw9f7j34"; depends=[httpuv httr jsonlite magrittr reticulate swagger tensorflow]; }; tfer = derive2 { name="tfer"; version="1.3"; sha256="1a5i9jccj39n61ixx8q2qq9ismr43jybp0vlvy6jda99r92zdhhl"; depends=[]; }; tfestimators = derive2 { name="tfestimators"; version="1.9.1"; sha256="0da34iy7fyfzhbvaj8494sl6nrmhcfbqcr71l95ziaxgb8285ndm"; depends=[forge magrittr progress purrr reticulate rlang tensorflow tfruns tibble tidyr tidyselect]; }; @@ -15835,8 +16465,9 @@ in with self; { tfprobability = derive2 { name="tfprobability"; version="0.11.0.0"; sha256="0mchj8gydgifvm5i4xzcjrhqqby9hhlksczz33njzrpyk807pndz"; depends=[keras magrittr reticulate tensorflow]; }; tframe = derive2 { name="tframe"; version="2015.12-1.1"; sha256="1yff22jzh1mp73zbz2mav6z8m42lylfjhb8dgxj4337fv3if3i13"; depends=[]; }; tframePlus = derive2 { name="tframePlus"; version="2016.7-1"; sha256="12xi2xw4pr78n3cppfknpxmjp2263pb4kqj9v412yxwp82rgb6yk"; depends=[tframe timeSeries]; }; - tfruns = derive2 { name="tfruns"; version="1.4"; sha256="1mqv5m13qm1dqz0622jd5ayb3nk76lfa657y2hyqv261flxizhvg"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tidyselect whisker yaml]; }; + tfruns = derive2 { name="tfruns"; version="1.5.0"; sha256="04lfckg1if3kfwcl4s4fcc9aw04crwk4m1qr55ag22j2x2jlb2l9"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tidyselect whisker yaml]; }; tfse = derive2 { name="tfse"; version="0.5.0"; sha256="05q75xsiy955xwgchagk7l7725y6mylp5lj5284xm7y2xh197zp3"; depends=[dapr magrittr]; }; + tgamtheme = derive2 { name="tgamtheme"; version="0.1.0"; sha256="1igv6vl3vqqx8pbvj5qr21cjphpizq3b5sjss359bhw2gy747npl"; depends=[ggplot2]; }; tgcd = derive2 { name="tgcd"; version="2.5"; sha256="1zsmard9vai0m4gz5mf5b9qqv6i7h5xhv1mbs2sc0kcznk28jirn"; depends=[]; }; tggd = derive2 { name="tggd"; version="0.1.1"; sha256="1izar1b3w148vp2r8gv3vpwfndib8ilxcjxgbfzbxn7q5mr73mwa"; depends=[gsl]; }; tgp = derive2 { name="tgp"; version="2.4-17"; sha256="0hl9nv2nayhq9jiy6lrgn702lb95allqiq8v221rj9pzxpc1230c"; depends=[maptree]; }; @@ -15845,6 +16476,7 @@ in with self; { thankr = derive2 { name="thankr"; version="1.0.0"; sha256="089ikp85d5ia6a1qzmw8dkgcmz628cibmwfzcpk7m3ii8acxq91w"; depends=[]; }; thectar = derive2 { name="thectar"; version="1.0.0"; sha256="1qh0qzg0ybb38kzm56xxlvhm201pdjm16aky5f1fdflcsszgy8mx"; depends=[proxy smacof]; }; theiaR = derive2 { name="theiaR"; version="0.4.0"; sha256="07m532r67cil2ya2w9lfhycrm8n0ga0r3x7jwbp5jbd83hw4l1p6"; depends=[askpass httr R6 raster XML]; }; + thematic = derive2 { name="thematic"; version="0.1.2"; sha256="0c5znjnlb7f6plklrq74yyqqwn1xzr64l6njv3g2w86myw86zavv"; depends=[farver ggplot2 rappdirs rlang rstudioapi scales]; }; themetagenomics = derive2 { name="themetagenomics"; version="1.0.2"; sha256="14i81cd9cyzhi3j2d9ygwlairkimhx8ffvva3pg3xwwvpywb6mla"; depends=[ggplot2 lda lme4 Matrix plotly Rcpp rstan scales shiny stm]; }; themis = derive2 { name="themis"; version="0.1.3"; sha256="0vs5jraw0xsby0rkl474iliqa2hc9pgmgr7isygmmh455zrl4gsq"; depends=[dplyr generics purrr RANN recipes rlang ROSE tibble unbalanced withr]; }; thermocouple = derive2 { name="thermocouple"; version="1.0.2"; sha256="1rlvhw3i83iq1vibli84gj67d98whvgkxafwpmisva1m4s1bmij4"; depends=[]; }; @@ -15852,10 +16484,10 @@ in with self; { thickmatch = derive2 { name="thickmatch"; version="0.3.1"; sha256="0q7wpilbk8jm3q7m5hb114jpbv4ri1745v9sbdf222l6ymds6pia"; depends=[DiPs MASS plyr rcbalance]; }; thief = derive2 { name="thief"; version="0.3"; sha256="12ymkkisg5p0g1gmvlczhp4dc7mirjg55fqqmz2d90673vlg6rfq"; depends=[forecast ggplot2 hts]; }; thinkr = derive2 { name="thinkr"; version="0.15"; sha256="17mfw067advk8vxlz8x0w0vww3718zp2fcs00sca8ivlh8yh9fcg"; depends=[assertthat crayon devtools dplyr ggplot2 lazyeval lubridate magrittr officer purrr readr rvg stringi stringr tidyr]; }; - this_path = derive2 { name="this.path"; version="0.2.1"; sha256="002x6c351x4jzr2mw6idd4qczsx073flkv3h9zk04cqwr2n08p5a"; depends=[]; }; + this_path = derive2 { name="this.path"; version="0.4.4"; sha256="0z8m0l1sknk5l4gn93f3im8lsr4dxzks8qx26sqsyf98kdi5qxw4"; depends=[]; }; thor = derive2 { name="thor"; version="1.1.2"; sha256="0r4kgzbydjb7z0j808g5zdkx5wmbqncqg453bqm4ylafpj5z79kv"; depends=[R6 storr]; }; thorn = derive2 { name="thorn"; version="0.2.0"; sha256="0sybjqwv9al5khkhhc7khbgr7n2vy6aggarh9n75mxpa8hn7j2qr"; depends=[htmlwidgets]; }; - threeBrain = derive2 { name="threeBrain"; version="0.1.8"; sha256="0finv8hk2nj1d0h7hb51vpfjnrr7xyxnilnj8hsxl60nbf1a9byg"; depends=[base64enc crayon digest dipsaus freesurferformats gifti htmltools htmlwidgets jsonlite oro_nifti R6 shiny stringr]; }; + threeBrain = derive2 { name="threeBrain"; version="0.1.9"; sha256="01s7v9l2g4k6yyq7h27dn3dlv8nwhbpbqwb73y472w54n8mrsrqg"; depends=[base64enc crayon digest dipsaus freesurferformats gifti htmltools htmlwidgets jsonlite oro_nifti R6 shiny stringr xml2]; }; threeboost = derive2 { name="threeboost"; version="1.1"; sha256="033vwn42ys81w6z90w5ii41xfihjilk61vdnsgap269l9l0c8gmn"; depends=[Matrix]; }; threejs = derive2 { name="threejs"; version="0.3.3"; sha256="1711h351nzxfkbbdwvfzyhciyvi9c6wx3jq1g97lzcqgnb45kivn"; depends=[base64enc crosstalk htmlwidgets igraph]; }; threesixtygiving = derive2 { name="threesixtygiving"; version="0.2.2"; sha256="0fnysgyq4gf23vqxwnzwb3f1cv1v1b2cb6z0kywb17mr57cbg7pv"; depends=[anytime curl dplyr httr janitor jsonlite purrr readr readxl tibble tidyr tidyselect]; }; @@ -15866,66 +16498,71 @@ in with self; { thriftr = derive2 { name="thriftr"; version="1.1.5"; sha256="1s8fn0imja6gh5bb0h2g1pmvkwk5v0dmpml9yvcd5dhz9lxy6vdj"; depends=[R6 rly stringi]; }; thsls = derive2 { name="thsls"; version="0.1"; sha256="18z7apskydkg7iqrs2hgnzby578qsvyd73wx8v4z3aa338lssdi7"; depends=[Formula]; }; thurstonianIRT = derive2 { name="thurstonianIRT"; version="0.11.1"; sha256="18xasg21w4sd32nhhs138fk70z9kpyv1l3jsrzzav2zwfb7246fk"; depends=[BH dplyr knitr lavaan magrittr MplusAutomation mvtnorm Rcpp RcppEigen rlang rstan rstantools StanHeaders tibble tidyr]; }; - tibble = derive2 { name="tibble"; version="3.0.4"; sha256="189yyl27mnswk1z51xw6gj3lyxgy6m332jq8xyvwskff57w2w692"; depends=[cli crayon ellipsis fansi lifecycle magrittr pillar pkgconfig rlang vctrs]; }; + tibble = derive2 { name="tibble"; version="3.1.1"; sha256="0qqfiwy7i2zjxwmz0xp1j1p88yycdg3lh377jkzz6zs6gsbd89ln"; depends=[ellipsis fansi lifecycle magrittr pillar pkgconfig rlang vctrs]; }; tibbletime = derive2 { name="tibbletime"; version="0.1.6"; sha256="0pfph4pyjxkxrir5ca1sh7xz07dylqnq40w0qyqiyaj5s23mbbmb"; depends=[assertthat dplyr glue hms lifecycle lubridate purrr Rcpp rlang tibble tidyselect vctrs zoo]; }; tibblify = derive2 { name="tibblify"; version="0.1.0"; sha256="0mdi9x36nrlcbchl7b2rlf4j1k0y6c7657aznm7xa0396ciij5fk"; depends=[crayon purrr rlang tibble vctrs]; }; - tibbrConnector = derive2 { name="tibbrConnector"; version="1.5.1"; sha256="1r58myi7x4hqqvyrphxy4ppa1lnad6x2ginfq2j52ax53zr07ajp"; depends=[RCurl rjson]; }; tictactoe = derive2 { name="tictactoe"; version="0.2.2"; sha256="1fx8plj5zr04xwk5hfj3zqhcknidxlzya2q14cf0m3y33a86lx42"; depends=[hash]; }; - tictoc = derive2 { name="tictoc"; version="1.0"; sha256="1zp2n8k2ax2jjw89dsri268asmm5ry3ijf32wbca5ji231y0knj7"; depends=[]; }; - tidyBF = derive2 { name="tidyBF"; version="0.4.2"; sha256="1j5q9yd4bzbda75bs2hkgm9vnr697kb73gz5wq5i0hjsi3xr9z1a"; depends=[BayesFactor dplyr effectsize insight ipmisc metaBMA parameters performance rlang tidyr]; }; - tidyCpp = derive2 { name="tidyCpp"; version="0.0.2"; sha256="178k2m0y5gv78l47x89ibra8gx81idmsi0fwn7rd3djna5fqld7l"; depends=[]; }; - tidyHeatmap = derive2 { name="tidyHeatmap"; version="1.1.5"; sha256="0knxhvccw7svnm63kahind7b0f00ri8qpriq5lk8g9nyhivzk55z"; depends=[circlize ComplexHeatmap dplyr lifecycle magrittr purrr RColorBrewer rlang tidyr viridis]; }; + tictoc = derive2 { name="tictoc"; version="1.0.1"; sha256="0197f540fkcxx5blx9jjnbvwgdnsdv55znmvgdizdp8pqhsib6m0"; depends=[]; }; + tidyBF = derive2 { name="tidyBF"; version="0.5.0"; sha256="035ksx0hrdd7rvhag5brgn7wi27fw0rjxndjynmwngbap6db4fhh"; depends=[BayesFactor dplyr effectsize insight ipmisc metaBMA parameters performance rlang tidyr]; }; + tidyBdE = derive2 { name="tidyBdE"; version="0.1.0"; sha256="1rx04b2j9dij30wccyk87ln1l828b0d3jihs2spzbw94hxg1q7qh"; depends=[dplyr ggplot2 readr scales tibble]; }; + tidyCpp = derive2 { name="tidyCpp"; version="0.0.3"; sha256="0qx30yb26g664aw44kicck35vr8bzrxqnmfd0mlqzp0bly4az0xr"; depends=[]; }; + tidyHeatmap = derive2 { name="tidyHeatmap"; version="1.2.2"; sha256="1nbg3qqfa2cqjn58rq6bpny38z94j34f8m4lfsnw07k36vsdph8p"; depends=[circlize ComplexHeatmap dplyr lifecycle magrittr purrr RColorBrewer rlang tibble tidyr viridis]; }; tidyLPA = derive2 { name="tidyLPA"; version="1.0.8"; sha256="0jrvd92q20kzz83lid9vvdh0l3l1kbc4m77cim261gzra1p7w5y0"; depends=[dplyr ggplot2 gtable mclust mix MplusAutomation tibble]; }; tidyMicro = derive2 { name="tidyMicro"; version="1.47"; sha256="02pc6rh0l7xdrqhihi53zp17x0walc0mpm70spm7yrwzkbc486lv"; depends=[ade4 broom car cowplot dplyr Evomorph factoextra ggplot2 ggrepel gridExtra latex2exp lme4 lsr magrittr MASS Matrix plotly plyr png purrr rlang scales scatterplot3d shapes stringr ThreeWay tibble tidyr tidyverse vegan VGAM]; }; tidyREDCap = derive2 { name="tidyREDCap"; version="0.2.0"; sha256="03kx91avw6zbmrcxvhkb7i3syw3ajkv9ypvgn2iq3ki887vbiwzw"; depends=[dplyr janitor magrittr purrr rlang stringr tibble tidyr]; }; tidyRSS = derive2 { name="tidyRSS"; version="2.0.3"; sha256="0jyaa4b92cwf1vgrpy6ixq1jq46im8mr63z7ncjyx59j88v4pn84"; depends=[anytime dplyr glue httr jsonlite magrittr purrr rlang tibble tidyselect vctrs xml2]; }; - tidySEM = derive2 { name="tidySEM"; version="0.1.3"; sha256="0kh8hwskb5nw46cg5ia3m18a137g0gvgrmw30sfmvzjikq1air4p"; depends=[ggplot2 igraph lavaan MplusAutomation psych]; }; - tidyUSDA = derive2 { name="tidyUSDA"; version="0.3.0"; sha256="1wy329wy9spzm9zpgbv4h2qgk1cqp3471yknky5sfxsklmdjhdn8"; depends=[brio crayon curl diffobj dplyr fuzzyjoin ggplot2 gitcreds httr jsonlite keyring magrittr nlme rgdal sf stringi tigris usethis waldo]; }; + tidySEM = derive2 { name="tidySEM"; version="0.1.9"; sha256="0aqwfndybip7pb1j8bf5dpf6a3xm0cdy5majv6xrsvvjwsi1ya4d"; depends=[ggplot2 igraph lavaan MplusAutomation psych]; }; + tidyUSDA = derive2 { name="tidyUSDA"; version="0.3.1"; sha256="0kr9zjlqy9h1kx5iq3y57va8zrvrb3x6sp8j0yhpa6cymlblcrfn"; depends=[brio crayon curl diffobj dplyr fuzzyjoin ggplot2 gitcreds httr jsonlite keyring magrittr nlme rgdal sf stringi tigris usethis waldo]; }; tidybayes = derive2 { name="tidybayes"; version="2.3.1"; sha256="055146k63b0dgkj6s6d9rwmdszxnjs4l6l4chavip9zwhrjsl93y"; depends=[arrayhelpers coda dplyr forcats ggdist ggplot2 magrittr plyr purrr rlang tibble tidyr tidyselect]; }; tidyboot = derive2 { name="tidyboot"; version="0.1.1"; sha256="0nss1ci763g9p5f33g163ppamx72axc8xhrils0cql3ka8439pmn"; depends=[dplyr modelr purrr rlang tidyr]; }; tidycat = derive2 { name="tidycat"; version="0.1.1"; sha256="04binzg0wijs173y8fr856935vdl80pid5d0zknb34fdaqa07kfh"; depends=[dplyr forcats magrittr stringr tibble tidyr]; }; - tidycensus = derive2 { name="tidycensus"; version="0.11"; sha256="0hyx3zbi785mygqsq6zk38bf5x04i3rxjr1gsbnmsqc7v56blbys"; depends=[dplyr httr jsonlite purrr rappdirs readr rlang rvest sf stringr tidyr tigris units xml2]; }; + tidycensus = derive2 { name="tidycensus"; version="0.11.4"; sha256="023p1l81w5p45a9ixl07d6mc5749ps99llb2j08f5yppllavfqxx"; depends=[dplyr httr jsonlite purrr rappdirs readr rlang rvest sf stringr tidyr tigris units xml2]; }; tidycode = derive2 { name="tidycode"; version="0.1.1"; sha256="0ahjhn1ar93xnd1snxnivdl43d1b6ica0pc30rgh8jpha87zbsay"; depends=[glue matahari pryr purrr rlang tibble]; }; tidycomm = derive2 { name="tidycomm"; version="0.1.0"; sha256="0xas6nr7fy612r0b5h8ncvirxhzy099zvhdzxbnskm3sa21046ni"; depends=[broom dplyr forcats glue magrittr MBESS purrr rlang stringr tibble tidyr]; }; tidycwl = derive2 { name="tidycwl"; version="1.0.5"; sha256="1ii23iamqmplsmnjnr6x9a1wjrbk82r0ywbskfifv26i66wyjqc3"; depends=[dplyr htmlwidgets jsonlite magrittr visNetwork webshot yaml]; }; - tidydice = derive2 { name="tidydice"; version="0.0.6"; sha256="1g0x426gri1s0fyn2srl7ni0zvrnx1wvg5zcr19fxgdw9m8rxxp2"; depends=[assertthat dplyr ggplot2 magrittr purrr tibble]; }; + tidydice = derive2 { name="tidydice"; version="0.1.1"; sha256="1iagm3avd0ncnd2jrx1mgri96gcv3bs7vbn2qdq44idv222k9igd"; depends=[assertthat dplyr ggplot2 magrittr purrr tibble]; }; tidyfast = derive2 { name="tidyfast"; version="0.2.1"; sha256="1bfs2wma705nx1lpndq75ama5dr9kkg8hwpklb20csnccnfrlvf6"; depends=[data_table Rcpp]; }; tidyfst = derive2 { name="tidyfst"; version="0.9.9"; sha256="1f90wld3nxnr8jyjl7l1agk2m2sbzw70mybax56z99zz28i87bba"; depends=[data_table fst stringr]; }; tidyft = derive2 { name="tidyft"; version="0.4.5"; sha256="0l6ixaqj356q319ms0bf655f530cgiia9saqdx9lryaf0b6i2hxb"; depends=[data_table fst stringr]; }; tidygapminder = derive2 { name="tidygapminder"; version="0.1.1"; sha256="1m6bynwnw1msrzvdmy12w3ympinqpd8j3may3rwmg9941nndjv2d"; depends=[data_table dplyr readxl tidyr]; }; - tidygate = derive2 { name="tidygate"; version="0.3.2"; sha256="171mp31ac12j8i97rkl8wa35gaj22d926cibybq21kswf2904nf4"; depends=[dplyr gatepoints lifecycle lme4 magrittr purrr RColorBrewer rlang scales stringr tibble tidyr tidyselect viridis]; }; + tidygate = derive2 { name="tidygate"; version="0.4.7"; sha256="0g5k136bgcvs9hzach3wlf97npdgy52anx7m7xjg6ixgf9rvqw70"; depends=[dplyr lifecycle magrittr purrr RColorBrewer rlang scales stringr tibble tidyr viridis]; }; tidygenomics = derive2 { name="tidygenomics"; version="0.1.2"; sha256="1cnwmmmzp9kg4k7iy2kgb22bdllpnz257pv1ahy3l11zy6bl48fc"; depends=[dplyr fuzzyjoin IRanges purrr Rcpp rlang tidyr]; }; tidygeoRSS = derive2 { name="tidygeoRSS"; version="0.0.1"; sha256="0bppkwbxmm8ps1cnrhzxkzm2pbi3s5bfiwx8fcrp31x81jl61w1x"; depends=[anytime dplyr httr jsonlite magrittr purrr rlang sf strex stringr tidyRSS xml2]; }; - tidygeocoder = derive2 { name="tidygeocoder"; version="1.0.1"; sha256="1djf7j3nzq6z2nnxxg9r495bx8sa7a1hd8bgkd7fw5pad8f83b7d"; depends=[dplyr httr jsonlite tibble]; }; + tidygeocoder = derive2 { name="tidygeocoder"; version="1.0.3"; sha256="04qwr011i7j6azih26z69275h4afr22b4wlacmi96ddcfpyidk2i"; depends=[dplyr httr jsonlite lifecycle tibble]; }; tidygraph = derive2 { name="tidygraph"; version="1.2.0"; sha256="17qjns33zcj82jcsl7bn7i4zxcm7ric50zyf7agi0i01zi16qz85"; depends=[dplyr igraph magrittr pillar R6 Rcpp rlang tibble tidyr]; }; tidyhydat = derive2 { name="tidyhydat"; version="0.5.2"; sha256="0yrd4x17918v8nkm1y9r334b0kvrklj313w8sjcx6402435nvmwj"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr rlang RSQLite tidyr]; }; tidyjson = derive2 { name="tidyjson"; version="0.3.1"; sha256="1rx5ncp20j9mhcziyqb0vgfq9061qylgvfwz27dsyz58r8fygwnq"; depends=[assertthat dplyr jsonlite magrittr purrr rlang tibble tidyr]; }; tidylo = derive2 { name="tidylo"; version="0.1.0"; sha256="135aw7zqgxz7l3zgskhzy72lgm1xwl50566s0s45dq7h6ah0vi5d"; depends=[dplyr rlang]; }; tidylog = derive2 { name="tidylog"; version="1.0.2"; sha256="076am30ayc16wm3bilznxqzd5806yi7dx5m9yv4w7q90i7imsqk7"; depends=[clisymbols dplyr glue tidyr]; }; - tidymodels = derive2 { name="tidymodels"; version="0.1.2"; sha256="09njrl655sh82xrzckgg56a6ndfrjla5fy8675wj4jsj14jpv0fw"; depends=[broom cli dials dplyr ggplot2 infer magrittr modeldata parsnip purrr recipes rlang rsample rstudioapi tibble tidyr tune workflows yardstick]; }; - tidymv = derive2 { name="tidymv"; version="3.0.0"; sha256="1ihgp9a0l2lrdcibglvsbcizqhq075lhxgsynjg2iqf03b47hqlg"; depends=[dplyr ggplot2 magrittr mgcv rlang tibble tidyr]; }; + tidymodels = derive2 { name="tidymodels"; version="0.1.3"; sha256="18vz0xsgxrfzcfxpvilhj1w0f4v4lx5ws37nwmy40lhv3v05nxn8"; depends=[broom cli conflicted dials dplyr ggplot2 infer modeldata parsnip purrr recipes rlang rsample rstudioapi tibble tidyr tune workflows workflowsets yardstick]; }; + tidymv = derive2 { name="tidymv"; version="3.2.1"; sha256="1jwq46njsbcdy74cxiqikzksnkrcffcdy699abirw56b6ffsfd71"; depends=[dplyr ggplot2 magrittr mgcv rlang tibble tidyr]; }; tidync = derive2 { name="tidync"; version="0.2.4"; sha256="1nm3021m3xnn4xkprkxd9sj9bwvfbwhrdhfdkfhsc9azqy3rgg9f"; depends=[dplyr forcats magrittr ncdf4 ncmeta purrr rlang RNetCDF tibble tidyr]; }; + tidyndr = derive2 { name="tidyndr"; version="0.1.0"; sha256="1rkaxsn0csh9wz7zr65sr9zlc330z4rr067ahxy7z5j4cnaw1iyh"; depends=[dplyr forcats janitor lubridate magrittr purrr rlang tibble tidyr vroom]; }; + tidypaleo = derive2 { name="tidypaleo"; version="0.1.1"; sha256="0xpfzdl6asvpf07s20la4bmm5lr93j7h8kx7v3y79xfjk2q2fzvd"; depends=[digest dplyr ggplot2 ggstance purrr rioja rlang scales stringr styler tibble tidyr tidyselect vctrs withr]; }; tidypmc = derive2 { name="tidypmc"; version="1.7"; sha256="1fijlvdiw4vwm34wizm4xlm0x10vvpkldzk7rrla44apq7y2w3yq"; depends=[dplyr readr stringr tibble tokenizers xml2]; }; - tidyposterior = derive2 { name="tidyposterior"; version="0.0.3"; sha256="0wsv800w056ziqbnwal7ncmdy4li8cn5yrdx07w35b7j8kl4mwhg"; depends=[dplyr generics ggplot2 lifecycle purrr rlang rsample rstanarm tibble tidyr vctrs]; }; + tidyposterior = derive2 { name="tidyposterior"; version="0.1.0"; sha256="1h1664sjrg6akph6nrk8ynn2kjiswv6gshy35gamam1h4axf6wah"; depends=[dplyr generics ggplot2 purrr rlang rsample rstanarm tibble tidyr tune vctrs workflowsets]; }; tidypredict = derive2 { name="tidypredict"; version="0.4.8"; sha256="0fff349pkksss8h1k2qza78l81ha6avx63pxziv6dfa8h62qmrdy"; depends=[dplyr generics knitr purrr rlang stringr tibble tidyr]; }; - tidyquant = derive2 { name="tidyquant"; version="1.0.2"; sha256="0wlhc4xw321g3jn3473fj4s9pgff3wyh9wfmrbqlbsngjq565541"; depends=[alphavantager cli crayon curl dplyr ggplot2 httr janitor lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod readr riingo rlang rstudioapi stringr tibble tidyr tidyselect timeDate timetk TTR xts]; }; - tidyquery = derive2 { name="tidyquery"; version="0.2.1"; sha256="1fy3szbkc5ymswxx3xi1rzd4gvxzsi5imvzf05i7xrh96adzl2f8"; depends=[dplyr lubridate queryparser rlang stringr]; }; + tidyquant = derive2 { name="tidyquant"; version="1.0.3"; sha256="11acp5mlwhavahl7i60j0ycaxypy7wrp81p7dkl6pxv8mw2gcym8"; depends=[alphavantager cli crayon curl dplyr ggplot2 httr janitor jsonlite lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod readr riingo rlang rstudioapi stringr tibble tidyr tidyselect timeDate timetk TTR xts]; }; + tidyquery = derive2 { name="tidyquery"; version="0.2.2"; sha256="0kjijqbf7k0ixjs91cnp1s1yx4hhm99gvgg6yjy87zpwqzgmcr96"; depends=[dplyr lubridate queryparser rlang stringr]; }; tidyqwi = derive2 { name="tidyqwi"; version="0.1.2"; sha256="16f0c2mdx6aiji6i7237kpc9awqdgrg6rhs408w6ag28dhxpgwlv"; depends=[dplyr furrr future httr jsonlite labelled magrittr purrr stringr tidyr xml2]; }; - tidyr = derive2 { name="tidyr"; version="1.1.2"; sha256="0v7x1pgmwmjypzdr4j2ig2klgrrgryi3qvw8hwqv65a5h9kwpz08"; depends=[cpp11 dplyr ellipsis glue lifecycle magrittr purrr rlang tibble tidyselect vctrs]; }; + tidyr = derive2 { name="tidyr"; version="1.1.3"; sha256="0cpbrvr759z8p7r9lpkjhj2dcdymsbnaib0rma9b4jb7i3qzmh2a"; depends=[cpp11 dplyr ellipsis glue lifecycle magrittr purrr rlang tibble tidyselect vctrs]; }; tidyrules = derive2 { name="tidyrules"; version="0.1.5"; sha256="04y6pnrp132sckjpp9g8yl0z7glcsx9dcfdpa8r27wsc2g491i63"; depends=[assertthat magrittr partykit purrr stringr tibble]; }; - tidyselect = derive2 { name="tidyselect"; version="1.1.0"; sha256="14rqx4dq574hilmdwrr34wyjg8rlw4rvndpsqd9plgxm3wwfsdg6"; depends=[ellipsis glue purrr rlang vctrs]; }; - tidyseurat = derive2 { name="tidyseurat"; version="0.1.17"; sha256="0b5mm5wd0bzqqhi4kqn28wi3gnaw5zr8dp5w9mqsrsz3aw8j0kd2"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang Seurat stringr tibble tidyr tidyselect]; }; + tidyselect = derive2 { name="tidyselect"; version="1.1.1"; sha256="0ss8mq05mwif64cj8zmrfx0ljgy3n0fvyv7f37782shr8rknmsqq"; depends=[ellipsis glue purrr rlang vctrs]; }; + tidyseurat = derive2 { name="tidyseurat"; version="0.2.0"; sha256="00kn6rkbs0br6lkyw0z645594a7alrdzh2njcqjgbfpp444riwg7"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang Seurat stringr tibble tidyr tidyselect]; }; tidystats = derive2 { name="tidystats"; version="0.5"; sha256="0shvrrqd5c89d4pncbqa80kzzf9v31drm170hiivjscldphkk43h"; depends=[dplyr jsonlite purrr readr stringr tibble tidyr]; }; tidystringdist = derive2 { name="tidystringdist"; version="0.1.4"; sha256="1srxh5gyspcghzvnmpyq36ky608ipf71vv0s1jg01mgf2i5pdkf4"; depends=[attempt rlang stringdist tibble]; }; - tidytable = derive2 { name="tidytable"; version="0.5.7"; sha256="0220gcf3968smirym0fb1zfs731xf0jyxvn2qm2677mak4limn22"; depends=[data_table glue lifecycle magrittr rlang tibble tidyselect vctrs]; }; - tidytext = derive2 { name="tidytext"; version="0.2.6"; sha256="0xmjkab7p13ncfglf3a9hvndf8fh96mmxw3l7hcpbnaq9qkiwk29"; depends=[dplyr generics hunspell janeaustenr Matrix purrr rlang stringr tibble tokenizers]; }; - tidytransit = derive2 { name="tidytransit"; version="0.7.2"; sha256="143xk1ipj7ar9ydqsq3b9ja427sjx0dzvkhsllk2cw5kkpgmpqfi"; depends=[assertthat data_table digest dplyr hms httr lubridate readr rlang sf tibble tidyr zip]; }; + tidysynth = derive2 { name="tidysynth"; version="0.1.0"; sha256="0rckvp51gp22bjcwcszdhhn51bzjivwndnvjcf67h1vmyqa3zjkj"; depends=[dplyr forcats ggplot2 kernlab LowRankQP magrittr optimx rgenoud rlang tibble tidyr]; }; + tidytable = derive2 { name="tidytable"; version="0.6.1"; sha256="0ghg6694g2q2kc31qy4cnv1jp4s8ry4n7iqlj44w54khj87acl88"; depends=[data_table glue lifecycle magrittr pillar rlang tidyselect vctrs]; }; + tidytext = derive2 { name="tidytext"; version="0.3.1"; sha256="182gad5pzz6zvhbla3d496sxwiszc1qz8kzzkksaacwpsrc61f9h"; depends=[dplyr generics hunspell janeaustenr lifecycle Matrix purrr rlang stringr tibble tokenizers vctrs]; }; + tidytidbits = derive2 { name="tidytidbits"; version="0.2.3"; sha256="1sia4bxfnb0hw047l6hl013si3iaisac51lp9b42m22hcxzxwgx0"; depends=[dplyr extrafont forcats magrittr purrr rlang stringr tibble tidyr tidyselect]; }; + tidytransit = derive2 { name="tidytransit"; version="0.7.3"; sha256="17ap5rffaz99fm23887m59ysvpynx1ia6n8cd9b1il340dm4d455"; depends=[assertthat checkmate data_table digest dplyr hms httr lubridate readr rlang sf tibble tidyr zip]; }; tidytree = derive2 { name="tidytree"; version="0.3.3"; sha256="05b53dap0f784kl6s1wgck6m7brwmy6ifqp7v5l06s1spfspagl6"; depends=[ape dplyr lazyeval magrittr rlang tibble]; }; tidytuesdayR = derive2 { name="tidytuesdayR"; version="1.0.1"; sha256="0slpfajv5cxqxfb1sh98574zrcgihiazscpr0zga2i6kiwn3kgpy"; depends=[httr jsonlite lubridate magrittr purrr readr readxl rstudioapi rvest usethis xml2]; }; - tidyverse = derive2 { name="tidyverse"; version="1.3.0"; sha256="02gyys08qv2v4cl2d66gml4d31ipxay0iyfwwksvxyclx60wp2kd"; depends=[broom cli crayon dbplyr dplyr forcats ggplot2 haven hms httr jsonlite lubridate magrittr modelr pillar purrr readr readxl reprex rlang rstudioapi rvest stringr tibble tidyr xml2]; }; + tidyverse = derive2 { name="tidyverse"; version="1.3.1"; sha256="0ck6xmsw5p168jmw2fqv79fzfnw5jckfra7mfii261j6kl89bkw3"; depends=[broom cli crayon dbplyr dplyr dtplyr forcats ggplot2 googledrive googlesheets4 haven hms httr jsonlite lubridate magrittr modelr pillar purrr readr readxl reprex rlang rstudioapi rvest stringr tibble tidyr xml2]; }; tidyvpc = derive2 { name="tidyvpc"; version="1.1.0"; sha256="09x684p2059by76b9ba9bxsyfjly0ykia43fhkpq63fbcbg7p8wg"; depends=[classInt data_table ggplot2 magrittr quantreg rlang]; }; + tidywikidatar = derive2 { name="tidywikidatar"; version="0.2.0"; sha256="1kcrcxly51nk4ffb08f2m8088f2y5hv0jz2fma81hlbxrpswf1g7"; depends=[DBI dplyr fs glue magrittr purrr rlang RSQLite stringr tibble tidyr usethis WikidataQueryServiceR WikidataR]; }; tidyxl = derive2 { name="tidyxl"; version="1.0.7"; sha256="1wg8h5fd2hd8ilshrbcs99q18p15687dx8j51v5pyd30pg5cab7b"; depends=[piton Rcpp]; }; - tiff = derive2 { name="tiff"; version="0.1-6"; sha256="1yy4im2lwzhjnnkfwxgkknsajvm83pcwaf370pkgfva2db0xjfv2"; depends=[]; }; + tiff = derive2 { name="tiff"; version="0.1-8"; sha256="18m17g5q3nz4v4wrqxnb129b1j02873g2vknddczkklf1pvq4x2b"; depends=[]; }; tiger = derive2 { name="tiger"; version="0.2.3.1"; sha256="0xr56c46b956yiwkili6vp8rhk885pcmfyd3j0rr4h8sz085md6n"; depends=[e1071 hexbin klaR lattice qualV som]; }; tigerhitteR = derive2 { name="tigerhitteR"; version="1.1.0"; sha256="0inyi12lf8bn7nbklf2rjixk6wrgrjcp8njv7knai4dgvv7v0rfa"; depends=[Hmisc magrittr openxlsx zoo]; }; tigerstats = derive2 { name="tigerstats"; version="0.3.2"; sha256="0p5z4qh0aznj03rnhk4lpqfkwnsa5zgvj51rddkzligg9zx73xwl"; depends=[abd ggplot2 lattice manipulate MASS mosaic mosaicData rlang]; }; @@ -15934,10 +16571,10 @@ in with self; { tigreBrowserWriter = derive2 { name="tigreBrowserWriter"; version="0.1.5"; sha256="0izgx1khci6qc6pz85dxj75kzxvpr30l0vhcv9476jrcbwqs4k8m"; depends=[DBI RSQLite]; }; tigris = derive2 { name="tigris"; version="1.0"; sha256="00s4cl3zgc2cqg845sxr2lcqqsvz72sa08zrrfmia1ngqxl6biwp"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; }; tikzDevice = derive2 { name="tikzDevice"; version="0.12.3.1"; sha256="040yz6wi05151m9nal97symv66a133kk0a8c1h6nz058zk081vav"; depends=[filehash png]; }; - tiledb = derive2 { name="tiledb"; version="0.8.2"; sha256="141wx8n8xmbh6mrr1hp1vvlcacsp8swwr38b6i3rdfzjckpq92fw"; depends=[nanotime Rcpp]; }; + tiledb = derive2 { name="tiledb"; version="0.9.0"; sha256="16s4ldbsf6f1b83myzhv9g38f5p05cdcy29yi3dsry7z6841sr1q"; depends=[nanotime Rcpp]; }; tilegramsR = derive2 { name="tilegramsR"; version="0.2.0"; sha256="11cnyvlghg8z7lr9ahzsjpyjrqnxqs77wdcydqvavrsqj745xvi2"; depends=[sf sp]; }; tilemaps = derive2 { name="tilemaps"; version="0.2.0"; sha256="06pwwlndb7nvw2b0h0fak3vnpbi11mxsby43qm9ng3k3sqwrqjz2"; depends=[clue ggplot2 igraph lwgeom sf smoothr]; }; - tiler = derive2 { name="tiler"; version="0.2.4"; sha256="1j1952vp0gnx0pnhqydipj4qw3cm05im502jc77wb2r1vklwimgb"; depends=[png raster rgdal sp]; }; + tiler = derive2 { name="tiler"; version="0.2.5"; sha256="02sxc70s8v5b5lf1fpv1ig1hmpkamsmzbgpk6zds504gh9kz7qxy"; depends=[png raster rgdal sp]; }; tilting = derive2 { name="tilting"; version="1.1.1"; sha256="0srvxjv3sg35n7f8pam45ny1z1dxwqjkrz9d91hf67a3fi34f5gk"; depends=[mvtnorm]; }; timeDate = derive2 { name="timeDate"; version="3043.102"; sha256="0wvl5pq261rvbgly7vilk3x3m9xk3ly6il1i5scwdf6srl1vlz1p"; depends=[]; }; timeR = derive2 { name="timeR"; version="1.2.0"; sha256="0lkx2ilbzq29w1c9ssya4f0za0sj7y30y9ml4v3zc21c1la0b6vi"; depends=[lubridate R6]; }; @@ -15955,30 +16592,32 @@ in with self; { timereg = derive2 { name="timereg"; version="1.9.8"; sha256="065vlsgs5xm11w13837jdvi9jxfa6j2vxpcp2r6hgrs38xv01ch0"; depends=[lava numDeriv survival]; }; timesboot = derive2 { name="timesboot"; version="1.0"; sha256="1ixmcigi1bf42np93md8d3w464papg9hp85v0c3hg3vl4nsm2bji"; depends=[boot]; }; timeseriesdb = derive2 { name="timeseriesdb"; version="0.4.1"; sha256="1ghb3lg63fs9zx34l5qczv39mdccnmqzlc74l1zhb8qmsg8sm1g2"; depends=[data_table DBI jsonlite openxlsx RPostgreSQL shiny xtable xts zoo]; }; - timetk = derive2 { name="timetk"; version="2.6.0"; sha256="0qi6x3hw7yamjpwabzq9kwg6xpqrgddg1j0xclycyc355p5c740x"; depends=[anytime assertthat dplyr forcats forecast generics ggplot2 hms lazyeval lubridate padr plotly purrr readr recipes rlang rsample slider stringi stringr tibble tidyr tidyselect timeDate xts zoo]; }; + timetk = derive2 { name="timetk"; version="2.6.1"; sha256="1yf0b8rpk0nmvvhz0hgj6mykr0kml0kh8f13xpzadwp9n0i0r3mw"; depends=[anytime assertthat dplyr forcats forecast generics ggplot2 hms lubridate padr plotly purrr readr recipes rlang rsample slider stringi stringr tibble tidyr tidyselect timeDate xts zoo]; }; timetools = derive2 { name="timetools"; version="1.14"; sha256="13jchgd9fc8hxj74wm1kg4rwcng4yxblkq04i33djsqghgb5f9mj"; depends=[]; }; timetree = derive2 { name="timetree"; version="1.0"; sha256="1fpdp6mkwm67svqvkfflvqxn52y2041zl09rxrms28ybbd5f84c0"; depends=[phangorn XML]; }; timevis = derive2 { name="timevis"; version="1.0.0"; sha256="003kizf974xibj90n60ipzwnrbdwjb659yxwi2xfnvh067aibwsp"; depends=[htmltools htmlwidgets jsonlite lubridate magrittr rmarkdown shiny]; }; timma = derive2 { name="timma"; version="1.2.1"; sha256="1pypk0pwkhyilh1hsn8hasia1hf6hbskj0xw6vas03k19b6fjnli"; depends=[QCA Rcpp RcppArmadillo reshape2]; }; timsac = derive2 { name="timsac"; version="1.3.6"; sha256="186919qka9j3kfpdw2gbh16n48d6xgz9lfqgk4b17f1d7l72iplg"; depends=[]; }; + timsr = derive2 { name="timsr"; version="0.0.2"; sha256="1v8yb92z4vpybyzldc9gknk4x1mxd5xzi9zccl13avrx6h2yjazq"; depends=[data_table opentimsr]; }; tinsel = derive2 { name="tinsel"; version="0.0.1"; sha256="0n1x0cf4x6cq1yks0444nxd9snga4m6inc5lfvb7k96fzjb3xgbp"; depends=[]; }; tint = derive2 { name="tint"; version="0.1.3"; sha256="00830n5nl6p73v9w0yzsak56phz4w1fh5lhf1c42gg1i81x7swnx"; depends=[htmltools knitr rmarkdown]; }; tinter = derive2 { name="tinter"; version="0.1.0"; sha256="02hfw2720qn70x0piahm8cy2ajsb5bqapr4vyvknm4v1yka1wmw3"; depends=[chk]; }; tinyProject = derive2 { name="tinyProject"; version="0.6.1"; sha256="0cflnfp5mib3j1y3n5yvi867h5a7z6xr6163gq9y9b6nrl2skxfk"; depends=[brew R_utils]; }; - tinylabels = derive2 { name="tinylabels"; version="0.1.0"; sha256="0iqf8z03bmcvw3a01m001zmkzykn2w7y310dgws6dvzsnjl3i7f9"; depends=[]; }; + tinylabels = derive2 { name="tinylabels"; version="0.2.1"; sha256="1gvj8l6lvhjxx6fpk825jdgwq34ikm4wmjicyn486spxjc81bw85"; depends=[]; }; tinyscholar = derive2 { name="tinyscholar"; version="0.1.2"; sha256="0h21b35mxbpr7kn01994nlaxl7qag1ngiry1y7gd0i5q56vrl0zm"; depends=[curl dplyr ggplot2 gt jsonlite magrittr purrr R_utils rlang rvest stringr xml2]; }; + tinyspotifyr = derive2 { name="tinyspotifyr"; version="0.2.2"; sha256="19nicp1ml73lylja2np52rcc070maxm9286fjm7bfx3zsblxmakc"; depends=[httr jsonlite]; }; tinytest = derive2 { name="tinytest"; version="1.2.4"; sha256="1asryjrah3fj39gg0c6yxgpr142j5bg2n990v7q8r0a5pb8gcr45"; depends=[]; }; - tinytex = derive2 { name="tinytex"; version="0.28"; sha256="11pa1q7gl17ala74lz10qbghk2yqanl9pylwvi9b4kmhx856b83n"; depends=[xfun]; }; - tipitaka = derive2 { name="tipitaka"; version="0.1.1"; sha256="0hkxbsrsy75zcnpy6lg9aj535gff9pk5qlv9kd532b24fff6hdny"; depends=[cpp11 dplyr magrittr stringi stringr]; }; + tinytex = derive2 { name="tinytex"; version="0.31"; sha256="04a3ncaxix30n9m73slpsn1idxv7j1f7fy3nhxpvkk514x9rgg0p"; depends=[xfun]; }; + tipitaka = derive2 { name="tipitaka"; version="0.1.2"; sha256="0xf64bpzwywwjm0135c7zjn4ha0h1zj36rj2d4h8dskiq9z90xqi"; depends=[cpp11 dplyr magrittr stringi stringr]; }; tipom = derive2 { name="tipom"; version="1.0.2-1"; sha256="1gdfv0g5dw742j6ycmi0baqh6xcchp3yf2n1g8vn7jmqgz5mlhdr"; depends=[]; }; - tippy = derive2 { name="tippy"; version="0.0.1"; sha256="0kkyi4s4ffpyjyfl89cd5y788ab1p253rx179k422y3y1z6w1md7"; depends=[htmltools htmlwidgets jsonlite shiny]; }; + tippy = derive2 { name="tippy"; version="0.1.0"; sha256="00c9v07ax7l0x5wpx3ca8hqvdqs3p62d58igp51rsbh9x1ylgjcn"; depends=[htmltools htmlwidgets jsonlite shiny]; }; tipr = derive2 { name="tipr"; version="0.2.0"; sha256="1gkdajyhpapfq531mdpc6jj12b1kmrzq5f6jlcm4lxinwf6jvsgq"; depends=[glue purrr tibble]; }; tis = derive2 { name="tis"; version="1.38"; sha256="0mqnvjfncfr8zc5rz1qq8jr1kv63p7sva7fvr3adbs7lgjza0yvm"; depends=[]; }; titanic = derive2 { name="titanic"; version="0.1.0"; sha256="0mdmh0ciwfig00847bmvp50cyvj8pra6q4i4vdg7md19z5rjlx3j"; depends=[]; }; titeIR = derive2 { name="titeIR"; version="0.1.0"; sha256="047vidn3zydbjijwgz6qm2d9j2ny8ng2sv5jzm8zb300y7k2426c"; depends=[Iso]; }; titrationCurves = derive2 { name="titrationCurves"; version="0.1.0"; sha256="0z127sihd262mdik46sq9vcf05s7jsqmkpm3p4d779viw74bl768"; depends=[]; }; - tkRplotR = derive2 { name="tkRplotR"; version="0.1.3"; sha256="0cx1vnsdy9d545dyrjni4diq58mz49sw36bxhn99c1rvflp4npzh"; depends=[]; }; - tkrplot = derive2 { name="tkrplot"; version="0.0-24"; sha256="04gk48vm8ilj1n3b3ir66pcfv504ra4rlgc0ll4ixbnp6w566wr8"; depends=[]; }; + tkRplotR = derive2 { name="tkRplotR"; version="0.1.5"; sha256="0klfbi9ym6nsv2vjb6kiqf1vd6g0z33p41viqvr53r7qx8hx1bsr"; depends=[]; }; + tkrplot = derive2 { name="tkrplot"; version="0.0-25"; sha256="0p7d26k8d4204y1j3j9x8n1jcak7amnw1822pywkhj02ks30xbi1"; depends=[]; }; tktdjl2r = derive2 { name="tktdjl2r"; version="0.2.0"; sha256="0qp7qki9kgddiis64cm894kkk6770qjh8v1b2f91smmpk3m7l321"; depends=[JuliaCall stringr]; }; tlemix = derive2 { name="tlemix"; version="0.1.3"; sha256="0c4mvdxlhbmyxj070xyipx4c27hwxlb3c5ps65ipm6gi8v8r6spj"; depends=[]; }; tlm = derive2 { name="tlm"; version="0.1.5"; sha256="1iw08pa70nb25fnv64834s5c8vl456a2rcng7x6v9vs5q37610g6"; depends=[boot]; }; @@ -15996,8 +16635,8 @@ in with self; { tm_plugin_mail = derive2 { name="tm.plugin.mail"; version="0.2-1"; sha256="0rn8jqv622qmc0zkz534ka5qnbca2rlabxm3vjbqplr6fh1ahwb1"; depends=[NLP tm]; }; tm_plugin_webmining = derive2 { name="tm.plugin.webmining"; version="1.3"; sha256="1694jidf01ilyk286q43bjchh1gg2fk33a2cwsf5jxv7jky3gl7h"; depends=[boilerpipeR NLP RCurl RJSONIO tm XML]; }; tm1r = derive2 { name="tm1r"; version="1.1.8"; sha256="15w703rd7mfm32b62yv9mpms2fjq9ifmc1n460vsrpqz1dkiavb9"; depends=[httr jsonlite]; }; - tmap = derive2 { name="tmap"; version="3.2"; sha256="12dib30ifm4xmdii89g08c1h05q88823xsyjnbfh0bzzj4h3rhgl"; depends=[classInt htmltools htmlwidgets leafem leaflet leafsync RColorBrewer rlang sf stars tmaptools units viridisLite widgetframe]; }; - tmaptools = derive2 { name="tmaptools"; version="3.1"; sha256="0hxcdgicy27jlnza4i0ckrlansjfc9z6wa17c2bfpdmdahbsnfj0"; depends=[classInt dichromat lwgeom magrittr RColorBrewer sf stars units viridisLite XML]; }; + tmap = derive2 { name="tmap"; version="3.3-1"; sha256="0w2hd8kdidyxz1rvqg1migfb1mnijlkbs4yyykxqn5plqw0l9yb2"; depends=[abind classInt htmltools htmlwidgets leafem leaflet leafsync RColorBrewer rlang sf stars tmaptools units viridisLite widgetframe]; }; + tmaptools = derive2 { name="tmaptools"; version="3.1-1"; sha256="0bal3czrdr93qig8s5cf5szld5vjbbks67rismfhlkmlgw6wp2gx"; depends=[dichromat lwgeom magrittr RColorBrewer sf stars units viridisLite XML]; }; tmbstan = derive2 { name="tmbstan"; version="1.0.2"; sha256="1g4b415k36wij028xz15kwpv8hmx92kznsp231bnrprzw2vrninr"; depends=[BH Rcpp RcppEigen rstan StanHeaders TMB]; }; tmcn = derive2 { name="tmcn"; version="0.2-13"; sha256="0rf8mz6kdm83pm85kzfyzb8kd3iwaxv5bgphjpxlnq6z32m9yds7"; depends=[]; }; tmg = derive2 { name="tmg"; version="0.3"; sha256="0yqavibinzsdh85izzsx8b3bb9l36vzkp5a3bdwdbh410s62j68a"; depends=[Rcpp RcppEigen]; }; @@ -16021,18 +16660,19 @@ in with self; { tolerance = derive2 { name="tolerance"; version="2.0.0"; sha256="001snzr2ipag3zprynydlbi9prkjzrllc054qh7m0qwkb3r19jjd"; depends=[MASS rgl]; }; tongfen = derive2 { name="tongfen"; version="0.3"; sha256="14f7bw67yvp2g0ll5g39fjq744calkj5hkbm9q8k0y07arg8jsf0"; depends=[dplyr geojsonsf lifecycle lwgeom purrr readr rlang sf stringr tibble tidyr]; }; toolmaRk = derive2 { name="toolmaRk"; version="0.0.1"; sha256="0pdr8lq4c11ia03v68lbfq38p3qp770mbj0nsbjsgbqi0pv9i1vx"; depends=[dplyr ggplot2 plyr reshape2]; }; - tools4uplift = derive2 { name="tools4uplift"; version="0.1-1"; sha256="0difrjqgj8amc49mwh059ca9mr0z1fzy0g43vk43alsyl8lvajc4"; depends=[dplyr glmnet]; }; + tools4uplift = derive2 { name="tools4uplift"; version="1.0.0"; sha256="1izm9q2bj9l2nd9jn0fi3lf9hscfa0vmib58ypgpjsbsn0nd7p2h"; depends=[BiasedUrn dplyr glmnet latticeExtra lhs]; }; topicdoc = derive2 { name="topicdoc"; version="0.1.0"; sha256="0qliy6y8l09nblch1swlywam2awzwjl5xx0w8c3kiz48jxfysw0j"; depends=[slam topicmodels]; }; - topicmodels = derive2 { name="topicmodels"; version="0.2-11"; sha256="0jmp6wva99y0w40cfw7b0faylndhjam097x36ilc4vmyczcv89lw"; depends=[modeltools slam tm]; }; + topicmodels = derive2 { name="topicmodels"; version="0.2-12"; sha256="1d6iizmn042b59q2y6qc82z19wq3xm0zvgkf8iqf8fdzh51kmn5g"; depends=[modeltools slam tm]; }; topmodel = derive2 { name="topmodel"; version="0.7.3"; sha256="15w9id90d6l0i0ji3ln3sxnpispb6pgabk4waysqn0nh6y4lfdgb"; depends=[]; }; topoDistance = derive2 { name="topoDistance"; version="1.0.1"; sha256="055z3gvqlb8nyy58ix89w7miav9gj3h43a4wcfc3kagd97xc3222"; depends=[gdistance igraph plotly raster RColorBrewer scales sp]; }; topologyGSA = derive2 { name="topologyGSA"; version="1.4.6"; sha256="0vas7qab5a86jb277ql63qjvfvx7iqqbcrwky7iyr0s8p8p794ia"; depends=[fields graph gRbase qpgraph]; }; - topsa = derive2 { name="topsa"; version="0.1.0"; sha256="1cndv05glqagakli9f1v2nhv5ryxx0pwr6ryflnqyv82a7qim54h"; depends=[ggplot2 scales sf TDA]; }; topsis = derive2 { name="topsis"; version="1.0"; sha256="056cgi684qy2chh1rvhgkxwhfv9nnfd7dfzc05m24gy2wyypgxj3"; depends=[]; }; tor = derive2 { name="tor"; version="1.1.2"; sha256="1s34hzw3a4cm9gk85fcxgxwmn2xc7njs1iw1snd91id3gdl6vppx"; depends=[fs readr rlang tibble]; }; - torch = derive2 { name="torch"; version="0.2.0"; sha256="105ha4hgdg5dr9w6sj3mm5qhq4mybd9lnf0w39cb3m1js8rpsdlh"; depends=[bit64 callr cli coro magrittr R6 Rcpp rlang withr]; }; - torchvision = derive2 { name="torchvision"; version="0.1.0"; sha256="1r3fydq71kpbxb5gz9ddv9cmnh8286zv23f8ziy8yncdc3kzlrbg"; depends=[abind fs jpeg png rappdirs rlang torch]; }; - tosca = derive2 { name="tosca"; version="0.2-0"; sha256="0sq6libv2vi5q3738fksjxabfhv63zc7nldgb4nh6k57yxqzwf3z"; depends=[data_table htmltools lda lubridate quanteda RColorBrewer stringr tm WikipediR]; }; + torch = derive2 { name="torch"; version="0.3.0"; sha256="069z8lajinwizgh1i28pjpyhc965hhxlwb8ynaajcllvfg9wxv4v"; depends=[bit64 callr cli coro magrittr R6 Rcpp rlang withr]; }; + torchaudio = derive2 { name="torchaudio"; version="0.1.1.0"; sha256="1lrdx7x0q6pgsxclfcdbrv7ylxn3p1p222avdmwndgrr5q9zvm8j"; depends=[fs glue rappdirs rlang torch]; }; + torchdatasets = derive2 { name="torchdatasets"; version="0.0.1"; sha256="0mhnvwb5wcf1kd0hks1d5qjsc642qmzlldajiysdz69idnzjfdxv"; depends=[fs pins stringr torch torchvision zip]; }; + torchvision = derive2 { name="torchvision"; version="0.3.0"; sha256="18sq3i28pm92vc9ka2jb67lxmgpclc26z402zvmvwz2m6hl0pvg3"; depends=[abind fs jpeg png rappdirs rlang torch]; }; + tosca = derive2 { name="tosca"; version="0.3-1"; sha256="0rxf3hh2kn1hg70mabv1xljw9v4rf0zr7phyxrb69mbphcwgdbj4"; depends=[data_table htmltools lda lubridate quanteda RColorBrewer stringr tm WikipediR]; }; tosls = derive2 { name="tosls"; version="1.0"; sha256="03nqwahap504yvcksvxdhykplbzmf5wdwgpzm7svn8bymdc472v2"; depends=[Formula]; }; totalcensus = derive2 { name="totalcensus"; version="0.6.5"; sha256="1vddlx48fk4clw3hmax57nqwjccvaazv31nfr4kvrlmc3w4jxjpj"; depends=[data_table magrittr purrr stringr]; }; touch = derive2 { name="touch"; version="0.1-5"; sha256="0dan4mlvc5lg9v4zj9w6gk3c4cy64kaa984y495xpc1bzmv5c6jd"; depends=[Rcpp]; }; @@ -16048,25 +16688,25 @@ in with self; { tracheideR = derive2 { name="tracheideR"; version="0.1.1"; sha256="1x1jwzgs2aqb3k17mm9mhfhnbwcmilhkjaz9rl40rcg84xjqdrpl"; depends=[tgram]; }; track = derive2 { name="track"; version="1.1.9"; sha256="1d0hab7xyayyhyyrbv8nvpka1kzry4yx10fg8aqwkca3nm7n2q3c"; depends=[]; }; trackdem = derive2 { name="trackdem"; version="0.5.2"; sha256="1kax2fr252rd0pqdf7ndgl8pb492fs1scn8xyasxxjdnlghdkk0d"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo shiny]; }; - trackdf = derive2 { name="trackdf"; version="0.2.1"; sha256="18kiwbrfalj19gjp2v3yhxlmc6liw5scfnwx2svq5f5h3h54a7iz"; depends=[data_table lubridate rgdal sp tibble]; }; + trackdf = derive2 { name="trackdf"; version="0.2.2"; sha256="110m7dmciyqbcb69sxi02h5djnf098wzfr84d6yppyc73a81989y"; depends=[data_table lubridate sp tibble]; }; trackeR = derive2 { name="trackeR"; version="1.5.2"; sha256="1f3giz6naxxyicgy9v0391ang43srwhy9zbiv4zmlc8i9v05b57i"; depends=[fda foreach ggmap ggplot2 ggridges gridExtra gtable jsonlite leaflet raster RSQLite scam sp xml2 zoo]; }; trackeRapp = derive2 { name="trackeRapp"; version="1.1"; sha256="0pys5vw3268j90i2gg6b1sgbx917vvk0x9k2ryh3l3p96vkrqv87"; depends=[changepoint colorspace DT foreach mapdeck mgcv plotly sf shiny shinydashboard shinyjs shinyWidgets trackeR V8 zoo]; }; trackr = derive2 { name="trackr"; version="0.10.6"; sha256="0p7i4cj5z1qis2a1mqqz3wrgwhhbcggyyfwj3zycm3xcig9f6d9b"; depends=[CodeDepends fastdigest ggplot2 gridGraphics histry htmltools lattice miniUI RJSONIO rlang rmarkdown roprov rsolr shiny]; }; + trackter = derive2 { name="trackter"; version="0.1.1"; sha256="11rk53w0y9p0az6ydiq3vy50j1pj4p4cml5dqabrpcgfz4icjkrs"; depends=[data_table dplyr EBImage features ggplot2 jpeg Momocs pastecs plyr raster zoo]; }; tractor_base = derive2 { name="tractor.base"; version="3.3.3.1"; sha256="0w5jw7pf77npkgig7667yikpbwv4dfk1dcq63qm88l409ga2f95p"; depends=[ore reportr RNifti shades]; }; trade = derive2 { name="trade"; version="0.5.5"; sha256="0brpvqj1zkic4ja6nbh2zxrlkmhj1ri4s04046pb9grycrxv93j1"; depends=[antitrust]; }; - tradestatistics = derive2 { name="tradestatistics"; version="1.1"; sha256="0x2ikbkgsg4gridmsqwzb2mbsh5hc6gx1kq65pbh1s6zv1kx89rs"; depends=[crul data_table digest jsonlite memoise]; }; trafo = derive2 { name="trafo"; version="1.0.1"; sha256="0gq3snjpkw0ncny7pkfi686qkgdhd8id73jxjk3chhqf5mzrrsbc"; depends=[FNN lmtest moments pryr]; }; - traineR = derive2 { name="traineR"; version="1.0.1"; sha256="122fhlmr2i6wlr65308fgcyhd8wvdqmp4cdyssxd57wq0dzsl3n5"; depends=[ada dplyr dummies e1071 kknn neuralnet nnet randomForest rpart stringr xgboost]; }; + trainR = derive2 { name="trainR"; version="0.0.1"; sha256="0wmxhw8yxkxpw08jma3r0zy7dhsrkbh5wjvd3izp5gf9dn9533cd"; depends=[dplyr glue lubridate magrittr purrr RCurl stringr tibble tidyr usethis xml2]; }; + traineR = derive2 { name="traineR"; version="1.6.1"; sha256="0s42xfn1mimd54cmy9m2mxswj71wp08ba1bsfbjj0732pr4ccay8"; depends=[ada adabag dplyr dummies e1071 ggplot2 glmnet glue kknn MASS neuralnet nnet randomForest ROCR rpart scales stringr xgboost]; }; traipse = derive2 { name="traipse"; version="0.2.0"; sha256="1g6xnk4iz4vakvv0qc6vqammr3jf0a2iisp4f439pcm9kwn64jcr"; depends=[geodist geosphere magrittr]; }; - traitdataform = derive2 { name="traitdataform"; version="0.6.1"; sha256="1lk1hrbjgdl14szwh1nn97vf30smfq34k797v0m6d72qckd6szcj"; depends=[data_table getPass plyr RCurl reshape2 taxize units XML]; }; traits = derive2 { name="traits"; version="0.5.0"; sha256="04s2523wkbjqxpwllvcy7ikyfri5gldgnynjswsxdy0k945wacvz"; depends=[crul data_table hoardr httr jsonlite readr rvest taxize tibble xml2]; }; traj = derive2 { name="traj"; version="1.2"; sha256="0mq6xdbxjqjivxyy7cwaghwmnmb5pccrah44nmalssc6qfrgys4n"; depends=[cluster GPArotation NbClust pastecs psych]; }; - trajectories = derive2 { name="trajectories"; version="0.2-2"; sha256="064hyk8v8my8kr05bi8grv3p04a5i97vdky5i7z3zka64l2f3kqr"; depends=[lattice sp spacetime zoo]; }; + trajectories = derive2 { name="trajectories"; version="0.2-3"; sha256="1k1fyjyng9mi3k5v6bpbv3vkqr7c9zjp4yiyynb3rjxqpn1fxx7k"; depends=[lattice sp spacetime zoo]; }; trajr = derive2 { name="trajr"; version="1.4.0"; sha256="092hx27b6d0vy1pvmga1z3b245aa9gn9aw3hszbhhkkic5zfpgbq"; depends=[plotrix signal]; }; - tram = derive2 { name="tram"; version="0.5-2"; sha256="0dmszy6251zzqszpcj3cn651a39bdyl8x0vg2lah6dwz59zmk9s8"; depends=[basefun Formula Matrix mlt multcomp sandwich survival variables]; }; - tramME = derive2 { name="tramME"; version="0.0.3"; sha256="1k7al49pgdr7bvsf8p6qrb1qz96lqfagvcnf59kxibi2rdixrqk1"; depends=[alabama basefun lme4 Matrix mlt nlme RcppEigen TMB tram variables]; }; - tramnet = derive2 { name="tramnet"; version="0.0-3"; sha256="1mii4dw244glq7yy0zmaicr8gpqdh0m3jxjv4sm2vn7w5bj7w44n"; depends=[basefun CVXR lhs mlr mlrMBO mlt ParamHelpers sandwich smoof tram]; }; - tranSurv = derive2 { name="tranSurv"; version="1.2.1"; sha256="0fpfzq00va05y6hp4yy5h8rdmfqjcnqp69lyic9mrxkma4nhd4nd"; depends=[rootSolve SQUAREM survival truncSP]; }; + tram = derive2 { name="tram"; version="0.6-0"; sha256="0lpdylfxksc5nzinczqcagz7fvjsvnzng1dakfwhfxwcfmcdzig0"; depends=[basefun Formula Matrix mlt multcomp sandwich survival variables]; }; + tramME = derive2 { name="tramME"; version="0.1.1"; sha256="03birc3rfjf838wivzcmv6rlblyaa3wrdk9ascny8zyxdni3wzmp"; depends=[alabama basefun coneproj lme4 MASS Matrix mlt mvtnorm nlme numDeriv RcppEigen TMB tram variables]; }; + tramnet = derive2 { name="tramnet"; version="0.0-5"; sha256="13i15asyxyb48648l3rniys6kzc94nikj2k5z50lycb25r4vz5v9"; depends=[basefun CVXR lhs mlr mlrMBO mlt ParamHelpers sandwich smoof tram]; }; + tranSurv = derive2 { name="tranSurv"; version="1.2.2"; sha256="17rvzjcn76z5niw1jappiadbkf66a9x0m7p3251lgb7qrnvpx3gk"; depends=[rootSolve SQUAREM survival truncSP]; }; transcribeR = derive2 { name="transcribeR"; version="0.0.0"; sha256="0y2kxg2da71i962fhsjxsr2ic3b31fmffhj3gg97b0nykfpcviib"; depends=[httr]; }; transformmos = derive2 { name="transformmos"; version="0.1.0"; sha256="1hsp399cj6cnsysb4hm4ra075qm2fxkjhyq16m3nai51fvzkak0p"; depends=[]; }; transformr = derive2 { name="transformr"; version="0.1.3"; sha256="1dn6h8i7vli2zv4408djyg74j9fv9sjrqf75hx9dh7qnj352wf69"; depends=[lpSolve Rcpp rlang sf tweenr]; }; @@ -16078,6 +16718,8 @@ in with self; { transport = derive2 { name="transport"; version="0.12-2"; sha256="1d49gm5lwih7b7rav3c42brcp6xi3y55xw11r9n8illjwjayfcxd"; depends=[data_table Rcpp RcppEigen]; }; transx = derive2 { name="transx"; version="0.0.1"; sha256="1xx934w4fhk2nwm5h6lf4irj83wsfp8lbplzcha5rnc7aka8pn3v"; depends=[rlang]; }; trapezoid = derive2 { name="trapezoid"; version="2.0-0"; sha256="0f6rwmnn61bj97xxdgbydi94jizv1dbq0qycl60jb4dsxvif8l3n"; depends=[]; }; + trawl = derive2 { name="trawl"; version="0.2.2"; sha256="1a8cvkmw7bmdljggfv26n2nrad6974spga2yw5386k70ghq56mz3"; depends=[DEoptim ggplot2 ggpubr MASS rootSolve Runuran squash TSA]; }; + treasuryTR = derive2 { name="treasuryTR"; version="0.1.2"; sha256="0v8rbiw68hl23bn44ax7y0i661afvbhssadvaximf1ncwsv479dz"; depends=[dplyr lubridate quantmod xts zoo]; }; tree = derive2 { name="tree"; version="1.0-40"; sha256="1rr6ws62j9h36f3nl713f8h3ndkh95mv46l055jvgmby5lw1dazz"; depends=[]; }; tree_interpreter = derive2 { name="tree.interpreter"; version="0.1.1"; sha256="18p1x53q1hhhagglgsq2axnr9l5rpa08vxjayqqmb6rsjrkygn78"; depends=[Rcpp RcppArmadillo]; }; treeClust = derive2 { name="treeClust"; version="1.1-7"; sha256="1s7kh6q0bkixsygrip95zf1bi10ihddsa5lq9dfxd68yh8rsby6z"; depends=[cluster rpart]; }; @@ -16087,27 +16729,27 @@ in with self; { treecm = derive2 { name="treecm"; version="1.2.2"; sha256="0vrawg4vvy270dn20gb2k99xi4q89l4mjz0mm7ikpz8wxqypzq2l"; depends=[plyr]; }; treedata_table = derive2 { name="treedata.table"; version="0.1.0"; sha256="0dhnb8if5wq6hzhjg40cw80sacigqmlm7nplm1f1ay5cqx1ynfi7"; depends=[ape data_table geiger lazyeval]; }; treedater = derive2 { name="treedater"; version="0.5.0"; sha256="007rdrbv3v1z3qbyasla22rck105sqlqh93yfmxklihdydl7smfd"; depends=[ape limSolve]; }; - treeducken = derive2 { name="treeducken"; version="1.0.0"; sha256="0y6yz1iq8v8aa5xfc0fd5azmx4h5a73iscf15hgpcvsxcr50f0w6"; depends=[ape apTreeshape Rcpp RcppArmadillo]; }; - treefit = derive2 { name="treefit"; version="1.0.0"; sha256="10yf4bm26vgiy3ra0c5lpflp0xdijw9zwl4aq9bz89qhszzji1fa"; depends=[ggplot2 igraph patchwork pracma]; }; + treeducken = derive2 { name="treeducken"; version="1.1.0"; sha256="0i2r1l508yi0cq7fzdds0hz2k4bxm67nknybxvbyylmwnwv6a0a1"; depends=[ape apTreeshape Rcpp RcppArmadillo]; }; treeheatr = derive2 { name="treeheatr"; version="0.2.1"; sha256="0618j5rlq0xik9vl2l8ircnh98wzdzf9bxnfgmiqrpywgmc8r5nk"; depends=[cluster dplyr ggnewscale ggparty ggplot2 gtable partykit seriation tidyr yardstick]; }; treelet = derive2 { name="treelet"; version="1.1"; sha256="0k3qhxjg7ws6jfhcvvv9jmy26v2wzi4ghnxnwpjm8nh7b90lbysd"; depends=[]; }; treeman = derive2 { name="treeman"; version="1.1.4"; sha256="1rlq8sklvpj6an8x9wvs3501y6dpl2vhl5zfmz0yvmif04msf49v"; depends=[ape bigmemory plyr RJSONIO stringr]; }; treemap = derive2 { name="treemap"; version="2.4-2"; sha256="15bdgkdwryb55v82b3hpcx4ykfg5z7zf10h0wwknf6kl1kn34v90"; depends=[colorspace data_table ggplot2 gridBase igraph RColorBrewer shiny]; }; - treemapify = derive2 { name="treemapify"; version="2.5.4"; sha256="17z2xw6f93hzd1s0d9nmzmks5kzsjmn95nwhsrcw610djy2nxhxs"; depends=[ggfittext ggplot2]; }; + treemapify = derive2 { name="treemapify"; version="2.5.5"; sha256="0g6bwchyn13iksv8vyc4d0c7n1zpy26x1bd6vkrm8ail98y2ia2m"; depends=[ggfittext ggplot2]; }; treenomial = derive2 { name="treenomial"; version="1.1.3"; sha256="1cw17dnayh5pgcgh5wghskq3i0zc7ww8kb8flyqyqrb4za2w47b6"; depends=[ape Rcpp RcppArmadillo RcppThread]; }; treeperm = derive2 { name="treeperm"; version="1.6"; sha256="0mz7p9khrsq4dbkijymfvlwr01y4fvs0x6si4x5xid16s2zsnmm4"; depends=[]; }; treeplyr = derive2 { name="treeplyr"; version="0.1.10"; sha256="0k5hblnpbs8h2812blc6crx1j9w9r7lzkz3fraxkn4gdfpfi5100"; depends=[ape dplyr geiger lazyeval phytools Rcpp]; }; - treespace = derive2 { name="treespace"; version="1.1.4.0"; sha256="146g5jjgf2yx7vjkpsgi38ah6fccyn6xnsk6mgqjramgf490xgrh"; depends=[ade4 adegenet adegraphics adephylo ape combinat distory fields htmlwidgets MASS phangorn phytools Rcpp rgl RLumShiny scatterD3 shiny shinyBS]; }; + treespace = derive2 { name="treespace"; version="1.1.4.1"; sha256="177n1h4yjvfmdsyy4anwi1gfxcxxvhdlyqagn74ni3pi6mxvjp4s"; depends=[ade4 adegenet adegraphics adephylo ape combinat distory fields htmlwidgets MASS phangorn phytools Rcpp rgl RLumShiny scatterD3 shiny shinyBS]; }; treestartr = derive2 { name="treestartr"; version="0.1.0"; sha256="05rxy9lmb77ng4266871sd881mlp4rd5qalvsd7ps2x2j4plaqf4"; depends=[ape phytools]; }; treestructure = derive2 { name="treestructure"; version="0.1.0"; sha256="0514q53bdwv9fwd58srhr6lzw1j56fcd64hml8w4rv4wzcd6c01m"; depends=[ape Rcpp]; }; + treetop = derive2 { name="treetop"; version="0.0.1"; sha256="06ca5zn60d925r775v39cdlpiwh0g9hv6a01hh1v6s2hs0176ivr"; depends=[geometry lidR maptools pryr raster rasterVis RColorBrewer rgdal rgl rglwidget sf shiny sp spatstat_core spatstat_geom stars]; }; trekcolors = derive2 { name="trekcolors"; version="0.1.2"; sha256="0rya2g27afjvi44w0si96cj0x4p5hc0ydqvjwigk4rwa1vc2ax2q"; depends=[ggplot2]; }; trekfont = derive2 { name="trekfont"; version="0.9.4"; sha256="09r8hjh7xjagfp3cxjai0079gan5h0zxjgpcvs4cx83icj76axgh"; depends=[]; }; - trelliscopejs = derive2 { name="trelliscopejs"; version="0.2.5"; sha256="12yanm6p9ygb7z1cg526f70i2a6179icyals69vkf8rjkd0n6si5"; depends=[autocogs base64enc digest DistributionUtils dplyr ggplot2 gtable htmltools htmlwidgets jsonlite knitr progress purrr rlang tidyr webshot]; }; - trelloR = derive2 { name="trelloR"; version="0.1.0"; sha256="0d549yw9pfxs8a3q716z08fzg68bkm5l09cv5iqqkm4gyasrxsf4"; depends=[dplyr httr jsonlite]; }; + trelliscopejs = derive2 { name="trelliscopejs"; version="0.2.6"; sha256="16i1km57yz8bl4ni919d3qmj8aj5l88l7byhd6ksh88ygpfl7wq8"; depends=[autocogs base64enc digest DistributionUtils dplyr ggplot2 gtable htmltools htmlwidgets jsonlite knitr progress purrr rlang tidyr webshot]; }; + trelloR = derive2 { name="trelloR"; version="0.7.1"; sha256="0rlnqpkvfp736m2ndz90v9rl4x17l3i8j70bsx7pfdd0nfffqsqv"; depends=[httr jsonlite]; }; trend = derive2 { name="trend"; version="1.1.4"; sha256="1mr5g5gaxiqj6x83ngcbwwh57vhrhcz0x9dh0rmvs9y2ivk29ccs"; depends=[extraDistr]; }; trendchange = derive2 { name="trendchange"; version="1.1"; sha256="19r0kmwsim78ynssyh6j0zd99cz96cacy3hmyrjabwwvz0f8sk3h"; depends=[]; }; trendeval = derive2 { name="trendeval"; version="0.0.1"; sha256="1cpv7l26ia40s46wfi4jwhwzl0xxs0dgzv4ngg8frbv5l80fmvmr"; depends=[ellipsis rsample tibble tidyr trending yardstick]; }; - trending = derive2 { name="trending"; version="0.0.2"; sha256="1ab5gm5v9s732ld7582bz32ygy2d5bndmbdw8xqnagcm03ab3yrz"; depends=[dplyr MASS tibble vctrs]; }; + trending = derive2 { name="trending"; version="0.0.3"; sha256="1crp8hizvasm47fjlf8pjy5jn7y9s16vm7dmpiyr4qb8sizia6xw"; depends=[ciTools MASS tibble vctrs]; }; trendsegmentR = derive2 { name="trendsegmentR"; version="1.0.0"; sha256="0zgm5nbm5azmz6x0xg4aphc80q6x1cvijry9pznyi0mg14743g86"; depends=[]; }; trendyy = derive2 { name="trendyy"; version="0.1.1"; sha256="03n7qdfc197hds8bdwl20b0nn62nqnz9r35v1q315nm3ccdifl1p"; depends=[crayon dplyr gtrendsR magrittr purrr stringr tibble]; }; trialr = derive2 { name="trialr"; version="0.1.5"; sha256="11b5wmyq4ki2n0cr2hp2lf219i8q5yh6biyyl8wnvajiaa8560ja"; depends=[BH binom coda dplyr ggplot2 gtools magrittr MASS purrr Rcpp RcppEigen rlang rstan rstantools StanHeaders stringr tibble tidybayes]; }; @@ -16123,14 +16765,15 @@ in with self; { trimetStops = derive2 { name="trimetStops"; version="0.1.0"; sha256="068mya6zqiacs3nznwmz17srn90ar6wjnpkgqsznzmigzy7c4idk"; depends=[]; }; trimmer = derive2 { name="trimmer"; version="0.8.1"; sha256="0hn5pignj5clg7wb3xd0mh9jqc480wqxxymzaas68lxzi6p5mng9"; depends=[cli crayon data_table pryr]; }; trimr = derive2 { name="trimr"; version="1.0.1"; sha256="0gcn18nwxmax9c35is0nldyh74cw8rg3gj60cixzs9qjnpb9xx3d"; depends=[]; }; - trinROC = derive2 { name="trinROC"; version="0.4"; sha256="02civ3r14hr6gbw6bdh77y00kiki6cdcv85hxk5g6n2nfspdr67r"; depends=[ggplot2 gridExtra rgl]; }; + trinROC = derive2 { name="trinROC"; version="0.5"; sha256="1jbnr8w14r2n6wvffv9bbhnhi7ipcjfzcgawp8rr2scss8hxy4zc"; depends=[ggplot2 gridExtra rgl]; }; trioGxE = derive2 { name="trioGxE"; version="0.1-1"; sha256="1ra86l3i7fhb6nsy8izixyvm6z23shv7fcjmnnpil54995j15ax4"; depends=[gtools mgcv msm]; }; - trip = derive2 { name="trip"; version="1.8.0"; sha256="1fwvw2z1aig0w41lzdm7aqm5kghjfz4vyzpc6m398k5zsjqrdl8l"; depends=[crsmeta dplyr geodist glue maptools MASS raster reproj rlang sp spatstat traipse viridis]; }; + trip = derive2 { name="trip"; version="1.8.5"; sha256="160dp9ji8j4w2fwh62l6cp485iy5n5is451rbgf28d5q0prd912c"; depends=[crsmeta dplyr geodist glue MASS raster reproj rlang sp spatstat_core spatstat_geom traipse viridis]; }; tripEstimation = derive2 { name="tripEstimation"; version="0.0-44"; sha256="1ylpyzlqr6l5haxq4icnlxw6vgvc2lsfz5sm2wqqm4m6h3p0i6s6"; depends=[lattice mgcv rgdal sp zoo]; }; tripack = derive2 { name="tripack"; version="1.3-9.1"; sha256="1ghza4by6shalsnqybn5qgv076dxh59b6vycg9v6ii216zbgi0kz"; depends=[]; }; triplot = derive2 { name="triplot"; version="1.3.0"; sha256="1apmdpxdnnmjyi7gcrjrqw44iqphr84nbgw0nfxcspzjgxhc81l1"; depends=[DALEX ggdendro ggplot2 glmnet patchwork]; }; tripsAndDipR = derive2 { name="tripsAndDipR"; version="0.1.0"; sha256="1gm96fxgql9y08w177nyxw0bahyafcs75maz743a9hfb0gjixvy2"; depends=[]; }; triversity = derive2 { name="triversity"; version="1.0"; sha256="1bar2bpy8jvj91jmzzdwy6rlvirsbxrzqnx4r825irqhc69gc53r"; depends=[data_tree Matrix]; }; + troopdata = derive2 { name="troopdata"; version="0.1.3"; sha256="1j8adfckz0jlsdcg1wq508b2ipvdf8aij8hsaxq82qnxja0mgrr4"; depends=[countrycode dplyr haven magrittr readstata13 rlang stringr tibble tidyr]; }; tropAlgebra = derive2 { name="tropAlgebra"; version="0.1.1"; sha256="1idvhxhw2f6z8iq0nfdj6jmzy8913vid84rvln6rx2dkzw3s9wnl"; depends=[]; }; tropicalSparse = derive2 { name="tropicalSparse"; version="0.1.0"; sha256="1ay6i3pzz5lpvznxqln31mijp86p6z0df7rvp0gm4lxvn294m7f8"; depends=[]; }; trotter = derive2 { name="trotter"; version="0.6"; sha256="0i8r2f2klkkfnjm7jhvga3gx6m7r97pd73d88004jzlm9ficspgy"; depends=[]; }; @@ -16142,23 +16785,23 @@ in with self; { truncgof = derive2 { name="truncgof"; version="0.6-0"; sha256="0b499i9zjwvva5jfl9fj02jjrgy8myxqfjwa0cjg0jrpgxczgwg8"; depends=[MASS]; }; truncnorm = derive2 { name="truncnorm"; version="1.0-8"; sha256="0zn88wdd58223kibk085rhsikl4yhlrwiyq109hzjg06hy6lwmj9"; depends=[]; }; truncreg = derive2 { name="truncreg"; version="0.2-5"; sha256="1scbjh5k1b8cjjavax08grlxdfs75s63dss0ifpz4d0axc4nm3iy"; depends=[maxLik]; }; - trundler = derive2 { name="trundler"; version="0.1.19"; sha256="0g97bn90k1843lw5x3d02347lpz4l53vvpazgfvnd99ai65fp0b1"; depends=[dplyr glue httr jsonlite magrittr progressr tibble tidygraph tidyselect urltools]; }; trust = derive2 { name="trust"; version="0.1-8"; sha256="1b6wsx4vybr5952ii3ska6jbcb3654iibz83n645khxfca5k8blm"; depends=[]; }; trustOptim = derive2 { name="trustOptim"; version="0.8.6.2"; sha256="1nsl8jd6cna52b5dd92jw3sh84jqpg7gazskn7166bcjbph19bf7"; depends=[Matrix Rcpp RcppEigen]; }; trustedtimestamping = derive2 { name="trustedtimestamping"; version="0.2.6"; sha256="1rx7ypy331mq5ni5hxhqcfnicvwdgg9j2pm3aj097a5hhigibdrq"; depends=[digest httr jsonlite]; }; + truthiness = derive2 { name="truthiness"; version="1.2.4"; sha256="1g7nf45whb523n544q48pg5di7i62r0h1mfa3dp16bciwa2y998h"; depends=[dplyr DT emmeans ez forcats ggplot2 lme4 magrittr MASS ordinal purrr Rdpack readr rmarkdown tibble tidyr]; }; tryCatchLog = derive2 { name="tryCatchLog"; version="1.2.1"; sha256="13c8llyg48ll8hz4v6pfbng3ilipj86q20blwbvn0b0h3apb3v7p"; depends=[]; }; ts_extend = derive2 { name="ts.extend"; version="0.1.1"; sha256="03b358nywx0zynb6006886mzvz1mbbaim6b5m641drklh6k0l6r1"; depends=[]; }; - tsBSS = derive2 { name="tsBSS"; version="0.5.6"; sha256="1rkr61ixi7xvx05yp65qp9j0j5vpr17cfw30gmx4hp9i212q1abr"; depends=[boot forecast ICtest JADE Rcpp RcppArmadillo xts zoo]; }; + tsBSS = derive2 { name="tsBSS"; version="0.5.7"; sha256="1lcvfd94vgfjbmagxh82rz8yc7468mm3vh99jmjg7jagvrb4iwib"; depends=[boot BSSprep forecast ICtest JADE Rcpp RcppArmadillo xts zoo]; }; tsDyn = derive2 { name="tsDyn"; version="10-1.2"; sha256="0wwp18qaxljdy1zqww1qw9fa9ycvgwcf6j52cpx3v2f2177x7snc"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; tsModel = derive2 { name="tsModel"; version="0.6"; sha256="0mkmhzj4g38ngzfcfx0zsiqpxs2qpw82kgmm1b8gl671s4rz00zs"; depends=[]; }; tsPI = derive2 { name="tsPI"; version="1.0.3"; sha256="00p7275iq8qn6c6dpqjr5s9fzc0a6njqqi9gvqnh5s9lfx9mbk1v"; depends=[KFAS]; }; tsSelect = derive2 { name="tsSelect"; version="0.1.8"; sha256="0ysijzhhwaj5n7h50jacshnla6d0h61q0f6lj19ic0lwvlz4yazy"; depends=[forecast]; }; - tsallisqexp = derive2 { name="tsallisqexp"; version="0.9-3"; sha256="0mzqplsj2w4a7jnav43afyk8ymy6p444j7km6kc8c2g4aifpgxcb"; depends=[]; }; + tsallisqexp = derive2 { name="tsallisqexp"; version="0.9-4"; sha256="07ymkrik1vwblcj5i0crihbrrxkrn8xjkap3lrzxy4vidgqalw3f"; depends=[]; }; tsapp = derive2 { name="tsapp"; version="1.0.3"; sha256="1k2r8nnqbkgrhgdqg45y0svzqj521wl6vbss23yypwh1gcbddzn9"; depends=[fftwtools Matrix vars]; }; tsbox = derive2 { name="tsbox"; version="0.2.1"; sha256="0k5azdn4af6mwcx1lf8ns83nim34kfsb9m26h3yjm9mk9qixr6k1"; depends=[anytime data_table]; }; tsc = derive2 { name="tsc"; version="1.0-3"; sha256="1acsdkxizlkix1sskwqv2a80rshw6f14zvcsjhrmmdfd4bmwh36y"; depends=[]; }; tscount = derive2 { name="tscount"; version="1.4.3"; sha256="087ncxy1q91yc5rr15d5h6m7kaqhw8yy5fbm22rkzp9dg2fhbzi3"; depends=[ltsa]; }; - tsdb = derive2 { name="tsdb"; version="0.7-4"; sha256="0ya87a14g94whcmmng55pkr7ql4m2dgmw5izd5ggldm4k6z62jp0"; depends=[datetimeutils fastmatch zoo]; }; + tsdb = derive2 { name="tsdb"; version="1.0-0"; sha256="1vlvigcvg4zpw7kl42kzbcllamlqvblw7ipfhvq04an4rq924pvf"; depends=[datetimeutils fastmatch zoo]; }; tsdecomp = derive2 { name="tsdecomp"; version="0.2"; sha256="1wy37gjp49dr60s4zhwv19iv3mzr1fjz5yilqmqgy78j5d45ns15"; depends=[]; }; tsdf = derive2 { name="tsdf"; version="1.1-8"; sha256="00s0aiis88611xsq9px61f9gwprp803wcvi5milvc7qckrh1kw0z"; depends=[]; }; tsdisagg2 = derive2 { name="tsdisagg2"; version="0.1.0"; sha256="1vjypf9d4rdprpgxfsgpccn412kvar59v341ridq2hcdp7hfb70s"; depends=[]; }; @@ -16166,33 +16809,31 @@ in with self; { tseries = derive2 { name="tseries"; version="0.10-48"; sha256="0wa4rcf0igayi1yrwc6wak6d491560p0z89rz32haqlkiiq25gak"; depends=[quadprog quantmod zoo]; }; tseriesChaos = derive2 { name="tseriesChaos"; version="0.1-13.1"; sha256="0qfrrzd0h8n9zp7wj5fl88wkiv22fs5zy8x509g316j0avm5zjr3"; depends=[deSolve]; }; tseriesEntropy = derive2 { name="tseriesEntropy"; version="0.6-0"; sha256="04clfkpkiy5p5nxcq59c7f4v1llj1d95lvck23h1px50lvb993fv"; depends=[cubature ks]; }; - tsfa = derive2 { name="tsfa"; version="2014.10-1"; sha256="0gkgl55v08dr288nf8r769f96qri7qbi5src7y6azrykb37nz6iz"; depends=[dse EvalEst GPArotation setRNG tfplot tframe]; }; tsfeatures = derive2 { name="tsfeatures"; version="1.0.2"; sha256="1zi7p7gdd9bg6rpdin88rq9qi43cpk663xmvffa7d5p1w45831kd"; depends=[forecast fracdiff furrr future purrr RcppRoll tibble tseries urca]; }; - tsfgrnn = derive2 { name="tsfgrnn"; version="0.1.0"; sha256="1kx4q1a12yrngg1jps4jk2k5svnmsl1lhybb6ziypza20hmmzral"; depends=[ggplot2]; }; - tsfknn = derive2 { name="tsfknn"; version="0.4.0"; sha256="1ji4y4khxzpk8k3m97p6j2li4khg17z9qzfgwjxijaxl4mwq54i2"; depends=[ggplot2 Rcpp]; }; + tsfgrnn = derive2 { name="tsfgrnn"; version="1.0.1"; sha256="1r9n5ggsc6d508ba4ggqfq6d6mhakkvisyczypv2wb17qdkl86g9"; depends=[ggplot2 Rcpp]; }; + tsfknn = derive2 { name="tsfknn"; version="0.5.0"; sha256="0rl3g0qs787cy67vq25aygb9mxhd63p66a1i4p2zi906cx4xj4b3"; depends=[ggplot2 Rcpp]; }; tsgui = derive2 { name="tsgui"; version="0.2.1"; sha256="0crm2ripxpjaz1cqz9lkj3y9xj4ia0hlq4lvz1rff0wq6d5w79dn"; depends=[RandomFieldsUtils tcltk2 tkrplot]; }; - tsiR = derive2 { name="tsiR"; version="0.4.2"; sha256="1yc9kcyj8yg7zsdkqsxkr7czv3i5gf2146z5h89qfqifrrzmjifa"; depends=[ggplot2 kernlab reshape2]; }; - tsibble = derive2 { name="tsibble"; version="0.9.3"; sha256="065nnggd5m483pmn21pyyjbbgs2wdmzhrrq2bgnzv0ldlxkr2clj"; depends=[anytime dplyr ellipsis lifecycle lubridate purrr rlang tibble tidyselect vctrs]; }; - tsibbledata = derive2 { name="tsibbledata"; version="0.2.0"; sha256="0lkpxhahyglh8h9pwwi57gqyqxirw4m1cr5cryxzs6gfsrx7dpbf"; depends=[tsibble]; }; + tsiR = derive2 { name="tsiR"; version="0.4.3"; sha256="0xzcfdad1z8336wnsrk9sy21psd898wwkdkndq7dshqwp2rj2kxl"; depends=[ggplot2 kernlab reshape2]; }; + tsibble = derive2 { name="tsibble"; version="1.0.1"; sha256="07c412jkybv3bw056f6xd7f5f7231qgynck31r396dqnq6aydbgp"; depends=[anytime dplyr ellipsis generics lifecycle lubridate rlang tibble tidyselect vctrs]; }; + tsibbledata = derive2 { name="tsibbledata"; version="0.3.0"; sha256="1lz3kx0r8h9d1flp3j0fsllrk4d7m312pk4w4jdv5p4l5f2sqmnx"; depends=[tsibble]; }; tsibbletalk = derive2 { name="tsibbletalk"; version="0.1.0"; sha256="14j1gpimvlz9cgxgl1n68ngkqx4w2ai92782ifrpvc57lqy9cs7v"; depends=[crosstalk dendextend dplyr glue lubridate plotly R6 rlang shiny tsibble vctrs]; }; tsintermittent = derive2 { name="tsintermittent"; version="1.9"; sha256="1mrb6yrsjwj6j40n97sgg42ddvwhjnaiq9k7ka249bbq01gf2975"; depends=[MAPA]; }; tsmp = derive2 { name="tsmp"; version="0.4.14"; sha256="1ahqdizygbs49xbgn35fdb5drxwyx2z9ima4fm83aqwaan7wrrja"; depends=[audio checkmate doSNOW foreach magrittr progress Rcpp RcppParallel RJSONIO]; }; - tsna = derive2 { name="tsna"; version="0.3.1"; sha256="15dx5inmlk05asakjv3jzlycid307xjpy4x2h52phix69ghbb95v"; depends=[network networkDynamic statnet_common]; }; + tsna = derive2 { name="tsna"; version="0.3.3"; sha256="11mjpz76lx86hy3ppx58awnxb5chajmy75hhlbnpv8mng9an6mmx"; depends=[network networkDynamic statnet_common]; }; tsne = derive2 { name="tsne"; version="0.1-3"; sha256="0s8cv2pndkddq62rzlgzgfdjp1vjv5hz5i5957sllnb97vbzbzb6"; depends=[]; }; tsoutliers = derive2 { name="tsoutliers"; version="0.6-8"; sha256="02qd7ky416yp2l4cfl2yl7ckr2aidkps9cxkk03r9r7c5247c6zh"; depends=[forecast]; }; tspmeta = derive2 { name="tspmeta"; version="1.2"; sha256="028jbbd0pwpbjq4r6jcc1h0p7c4djcb9d2mvgzw1rmpphaxjvrkd"; depends=[BBmisc checkmate fpc ggplot2 MASS splancs stringr TSP vegan]; }; tsqn = derive2 { name="tsqn"; version="1.0.0"; sha256="1iv1wwa6a9824dbgfk5a609szppc3a8j250z74hb8csjvwwx9qq9"; depends=[fracdiff MASS robustbase]; }; tsriadditive = derive2 { name="tsriadditive"; version="1.0.0"; sha256="1zk97vz5ag6j0r8w3b5kgl2cx628jmdy73spmwmsw7x5yc24901d"; depends=[survival]; }; - tsrobprep = derive2 { name="tsrobprep"; version="0.0.0.2"; sha256="1mk6km4n9s9fbc3xgla54fr7h76s8kpiwj1b6dsy8d4r63ix7xcb"; depends=[Matrix quantreg]; }; - tstools = derive2 { name="tstools"; version="0.3.8"; sha256="0daxrp91hxc367hlzla0s7x5dddnx462239jcq0ickx6awkk753g"; depends=[data_table jsonlite xts zoo]; }; + tsrobprep = derive2 { name="tsrobprep"; version="0.1.0"; sha256="17a4igrvwbgdxa5nmk362mbpnbs1c9yw54bddp17q5ngmnnjwgss"; depends=[MASS Matrix mclust quantreg]; }; tsutils = derive2 { name="tsutils"; version="0.9.2"; sha256="0gp8f0a9dn3h4lv38xiw04j832igwhfralzc5vd74r952x7b6hbx"; depends=[forecast MAPA plotrix RColorBrewer]; }; tsviz = derive2 { name="tsviz"; version="0.1.0"; sha256="099ga750kr9hrkd8vaxhz6h4gha6zfr9jzqwrmgms2h2h1a7jxr7"; depends=[dplyr forecast ggplot2 lubridate magrittr miniUI plotly shiny shinyhelper]; }; - tsvr = derive2 { name="tsvr"; version="1.0.1"; sha256="1lkb6lj3lsx25d671gb804brbv74isrjbj9pd09q84qp7jgrpgyd"; depends=[]; }; + tsvr = derive2 { name="tsvr"; version="1.0.2"; sha256="1h8yjnw7f8w6m19jh3a518vkzjcmbhl3lk15d1jyhy8p4ajzzjdx"; depends=[]; }; tswge = derive2 { name="tswge"; version="1.0.0"; sha256="0wj0kyb1dcwfn8wjp7skgcflc48cr4va0i0jg8x970658if7z6fz"; depends=[astsa MASS PolynomF signal waveslim]; }; - tsxtreme = derive2 { name="tsxtreme"; version="0.3.2"; sha256="1lmvwk83186qb59k3i4ppv85dvz7fww8wr97mvkl8457mf4n6kg0"; depends=[evd MASS mvtnorm]; }; + tsxtreme = derive2 { name="tsxtreme"; version="0.3.3"; sha256="1725rkdq377z3c06hc2g9l0dwgfy5gz3pgygpz1pyy83s5c7j869"; depends=[evd MASS mvtnorm tictoc]; }; ttScreening = derive2 { name="ttScreening"; version="1.6"; sha256="1i8c9l3sdkzl99zxxyfqm84vkh6wjdh3a32l5q8ikf74g9dhxkf4"; depends=[corpcor limma MASS matrixStats simsalapar sva]; }; ttTensor = derive2 { name="ttTensor"; version="0.99.2"; sha256="1qhpsaa0m8g61mhdffnrpfsc66iwm240na2wsa3cnmydk1mqjlxd"; depends=[Matrix PTAk rTensor tensorr]; }; - ttbary = derive2 { name="ttbary"; version="0.1-1"; sha256="028v4kgli3bdsa6cn9wz9g1c3n0r1cms70yhxgq829i8f9qw2mss"; depends=[Rcpp spatstat]; }; + ttbary = derive2 { name="ttbary"; version="0.2-0"; sha256="1231ssndf0a0b1g8sz8w5ckw7410c5qmflnsxmizc4v8iiscdibc"; depends=[Rcpp spatstat spatstat_core spatstat_geom spatstat_linnet]; }; ttbbeer = derive2 { name="ttbbeer"; version="1.1.0"; sha256="1azffcizm3460kxvrxxkilc6qxspyi247x8drrw5ywfichwhmdhc"; depends=[]; }; ttdo = derive2 { name="ttdo"; version="0.0.6"; sha256="1p7anl980nl5wxgymw24apwg48wh6c2mzl0h1zifrarpj8a9v0k2"; depends=[diffobj tinytest]; }; ttestshiny = derive2 { name="ttestshiny"; version="0.1.0"; sha256="186569p9h3597z9lxyzm7fj8k6bzgm2kw757dcv2qhhf2k7nfch9"; depends=[dplyr shiny shinyAce shinyjs]; }; @@ -16205,10 +16846,11 @@ in with self; { tuckerR_mmgg = derive2 { name="tuckerR.mmgg"; version="1.5.1"; sha256="0lrylh0np0kbl4xx3gmlvid0g11fh0ad39wdwbz6hrmf5pzsjdjq"; depends=[]; }; tufte = derive2 { name="tufte"; version="0.9"; sha256="0kylvxbw3wbb5p7f09wav20l8gxbpvkcd3k70dimnqhrfbzw05qd"; depends=[htmltools knitr rmarkdown xfun]; }; tufterhandout = derive2 { name="tufterhandout"; version="1.2.1"; sha256="04fvvbx69a28nk7i4wz5ynamz1yvsa2ibz542r1xaq1ikk0ywqbw"; depends=[knitr rmarkdown]; }; + tukeyGH = derive2 { name="tukeyGH"; version="1.0.0"; sha256="1nlhv8lyjaqq95l7j85bdqdrsphagwf69iq8g3ryyyckchirljjg"; depends=[magrittr minqa Rdpack rootSolve]; }; tukeytrend = derive2 { name="tukeytrend"; version="0.7"; sha256="15j7g0drb92rpxq7d0jl9h0hxpi9pbgpvfcxaicrcgypxap3721q"; depends=[lme4 Matrix mgcv multcomp nlme pbkrtest]; }; tumblR = derive2 { name="tumblR"; version="1.2"; sha256="1qili2c9wb6hpjjf7m0gyvdymzls5w4pghjkyi3sbp0q7ayhbh12"; depends=[httr RCurl RJSONIO stringr]; }; tumgr = derive2 { name="tumgr"; version="0.0.4"; sha256="1ylfmrsg177g75l2scjpgw6v4dpz62r7cy89pql9zd5zqy167xqj"; depends=[minpack_lm]; }; - tune = derive2 { name="tune"; version="0.1.2"; sha256="0ja7rjkjj88v3ngrc6izcz2qh9qv4s8abgcafmvx2ihgz99hds37"; depends=[cli dials dplyr foreach generics ggplot2 glue GPfit hardhat parsnip purrr recipes rlang rsample tibble tidyr vctrs workflows yardstick]; }; + tune = derive2 { name="tune"; version="0.1.5"; sha256="06snvnppa9xan99lkd2b7ynh916j75ga9lvifnra614akhhxv4rr"; depends=[cli dials dplyr foreach generics ggplot2 glue GPfit parsnip purrr recipes rlang rsample tibble tidyr vctrs workflows yardstick]; }; tuneR = derive2 { name="tuneR"; version="1.3.3"; sha256="0av978m4h2iqazyfq6n2cgkh4wpllihh7s29lah2nb8ngc0w5hxx"; depends=[signal]; }; tuneRanger = derive2 { name="tuneRanger"; version="0.5"; sha256="1xf78q8f7sq6w2jjwcw8vz88bmbp8yivydmqygjag58abnhd0356"; depends=[BBmisc DiceKriging lhs lubridate mlr mlrMBO ParamHelpers ranger smoof]; }; tuple = derive2 { name="tuple"; version="0.4-02"; sha256="0fm8fsdfiwknjpc20ivi5m5b19r9scdxhzij70l8qi3ixw1f0rnk"; depends=[]; }; @@ -16218,40 +16860,46 @@ in with self; { tutorial = derive2 { name="tutorial"; version="0.4.3"; sha256="0sxdlpw0w4azlaxdlk36ycrric6pbj2zi4nyv26pgsp0cr1hrx6r"; depends=[base64enc knitr markdown rjson]; }; tuts = derive2 { name="tuts"; version="0.1.1"; sha256="0mwc6lsnhxww041wh3020wz7w812asp1d6djv4n9pl7jil0kvkry"; depends=[coda doParallel foreach lomb mcmcplots rjags truncnorm]; }; tvR = derive2 { name="tvR"; version="0.3.1"; sha256="056a241m3c1jhf8idly1bm4xja349cg5yzz19l45zyggml82snin"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; - tvReg = derive2 { name="tvReg"; version="0.5.3"; sha256="12ln2mkhxhp6i2x928cz2y7i1xsqrr3840rvp7k4c4skj2mrb898"; depends=[bvarsv MASS Matrix plm systemfit vars]; }; + tvReg = derive2 { name="tvReg"; version="0.5.4"; sha256="0v5w69b79byj9c450qas1lpvvzc513ggvniqp4y29pyb362a6hw0"; depends=[bvarsv MASS Matrix plm systemfit vars]; }; tvd = derive2 { name="tvd"; version="0.1.0"; sha256="07al7gpm81a16q5nppsyc5rhv6zzkcvw72isx955b1q189v073aw"; depends=[Rcpp]; }; - tvem = derive2 { name="tvem"; version="1.0-0"; sha256="128md4y65cvl6ks9g39w9d1jd2fyw1y6wx0c0cwx9sqhc3jssba9"; depends=[mgcv]; }; + tvem = derive2 { name="tvem"; version="1.2-0"; sha256="1sw8ks6rpvpmr5b6shbwaclwn2j1xfbwg6zdlyjsy68752mz2ji3"; depends=[mgcv]; }; + tvgarch = derive2 { name="tvgarch"; version="2.0"; sha256="0ph231w39dhzliwsz34y38c62jqqj68gcm2qzcz2yawsx59ml4g1"; depends=[garchx hier_part matrixStats numDeriv zoo]; }; tvgeom = derive2 { name="tvgeom"; version="1.0.1"; sha256="1lr2vqgj5jfhzavwd43wcchhbicmf4dqjvyf66rvnjkw3jaig8dm"; depends=[]; }; - tvm = derive2 { name="tvm"; version="0.4.0"; sha256="0v5b9s35q08a4z2ccph7g9q211w04x99sh72lrfby43fgl2jwyd1"; depends=[ggplot2 reshape2]; }; + tvm = derive2 { name="tvm"; version="0.5.0"; sha256="1disznln4xgkr9q6sj978nadbwg43xv28fq3r3zyy6icg4x9h6gs"; depends=[ggplot2 reshape2 scales]; }; + tvmediation = derive2 { name="tvmediation"; version="1.0.0"; sha256="16djg3ibn1i68lzwby8242qa90347iq1i9ha4nyzacaf7mjd4ysl"; depends=[dplyr ggplot2 kedd locpol]; }; tvthemes = derive2 { name="tvthemes"; version="1.1.1"; sha256="0j24hhpjab1220bmspd6a0pa2295gpyyrcxs1rxjnsr5vgn90fcq"; depends=[extrafont ggplot2 glue magick scales]; }; - twang = derive2 { name="twang"; version="1.6"; sha256="0d190420igm1ai3gv9fjqxw6z1g7zrc4q3yidkn083mj42asxn4v"; depends=[gbm lattice latticeExtra survey xtable]; }; - tweedie = derive2 { name="tweedie"; version="2.3.2"; sha256="10fv998qjxsyx0h94fi0xbh6xbf24nwgh254n9zfnmix9vk2cqls"; depends=[]; }; - tweenr = derive2 { name="tweenr"; version="1.0.1"; sha256="0sq90pbln6lkc2q3zflhkxxwpqdw5dd7igrxhdnlynkdrmi83mpg"; depends=[farver magrittr Rcpp rlang]; }; - tweet2r = derive2 { name="tweet2r"; version="1.1"; sha256="1ivzc05af3fbdxn99lcphm74qs64lz8577zzi6r52r9xjpsqpqzi"; depends=[ggmap ggplot2 maptools plyr rgdal ROAuth RPostgreSQL RSQLite sp spacetime spatstat splancs streamR]; }; - twenty48 = derive2 { name="twenty48"; version="0.1.0"; sha256="1ydxy6rwlyjq1bb9clkcknwn89j1p064g6jdc7s7zl7rsxrll6v2"; depends=[crayon R6]; }; + twang = derive2 { name="twang"; version="2.0"; sha256="1lwb0kazskdn9id3n6jgww28arj74lwsf8csm4k86wsb4mdqdlf9"; depends=[data_table gbm ggplot2 lattice latticeExtra MatrixModels survey xgboost xtable]; }; + twangContinuous = derive2 { name="twangContinuous"; version="1.0.0"; sha256="0bn1i9nid97irn820591ml3556bbmg6pw2qhm9k9vqgnqmnhcfnq"; depends=[gbm lattice Rcpp survey xtable]; }; + twangRDC = derive2 { name="twangRDC"; version="0.1"; sha256="16c2xfcx0n27b0yzffn5qn7ag8lkckiqz8kzf83isaqnsji6yd0n"; depends=[data_table ggplot2 MatrixModels xgboost]; }; + tweedie = derive2 { name="tweedie"; version="2.3.3"; sha256="1nfhaqblvm62j8gfkyrgba5ai0pb2fsnrxp63637mhys2bawlcm0"; depends=[]; }; + tweenr = derive2 { name="tweenr"; version="1.0.2"; sha256="17znizh4yabh2zs9mzyr0sl6p0pw49961i61br7cl1b7v9sza18q"; depends=[farver magrittr Rcpp rlang]; }; + twenty48 = derive2 { name="twenty48"; version="0.2.0"; sha256="1bhwjk6qx63jkx0vxizbxi6z8mqpljdv2f259cmf7jsrv2mr0kdy"; depends=[crayon R6 rstudioapi]; }; twfy = derive2 { name="twfy"; version="0.1.0"; sha256="14xxl9y8iagnn5jd06k6jyy4wk7crm64svz8h0zmzcvg47k8bwc7"; depends=[httr jsonlite]; }; twiddler = derive2 { name="twiddler"; version="0.5-0"; sha256="0r16nfk2afcw7w0j0n3g0sjs07dnafrp88abwcqg3jyvldp3kxnx"; depends=[]; }; twilio = derive2 { name="twilio"; version="0.1.0"; sha256="0b70vcc2bd5jpd2d82i2k828q90viah0b9abz2r627bbyxivpcnd"; depends=[httr jsonlite lubridate magrittr purrr]; }; twitteR = derive2 { name="twitteR"; version="1.1.9"; sha256="1hh055aqb8iddk9bdqw82r3df9rwjqsg5a0d2i0rs1bry8z4kzbr"; depends=[bit64 DBI httr rjson]; }; twitterwidget = derive2 { name="twitterwidget"; version="0.1.1"; sha256="1dlhydhy69284gg3jsxwa6h8cp1rlkg1j8h8z1fjz4fyy1p5xrpv"; depends=[htmlwidgets]; }; twl = derive2 { name="twl"; version="1.0"; sha256="0n2r40ddsr5zpzi92k7f0lvq78k5cmfbqzjxvr78hwq6j13dhar3"; depends=[corrplot data_table MCMCpack Rfast]; }; - twn = derive2 { name="twn"; version="0.1.1"; sha256="13q8bw6r61zdaw60b9hnlahjand43vc7l868igikn0ny3pqz3plp"; depends=[crayon dplyr rlang tibble]; }; + twn = derive2 { name="twn"; version="0.2.0"; sha256="1nc3jc3rakppn9bxzqwbs7yhgzp8skz62zyybpwn2ddnjskc2fn1"; depends=[crayon dplyr rlang stringr tibble]; }; twosamples = derive2 { name="twosamples"; version="1.1.1"; sha256="0c2hk49zysjgkgm3pv9j1gnpg5hs5icdzn40ihyqj8aziynkripp"; depends=[Rcpp]; }; twostageTE = derive2 { name="twostageTE"; version="1.3"; sha256="0mkxs3lmzja51zdrf5himhwcdygpj6czhdd2bydakm26kvw7znwr"; depends=[isotone]; }; twoway = derive2 { name="twoway"; version="0.6.3"; sha256="02z2syb0g92d97gjxfkarpil9b2n25s128606h071jl0s88cr4ar"; depends=[]; }; - twowaytests = derive2 { name="twowaytests"; version="1.0"; sha256="1h8bypzfbv5ddam9zrqqb7abvv04n07hl459ippxbfk76qyp2rhg"; depends=[car ggplot2 nortest onewaytests]; }; - txshift = derive2 { name="txshift"; version="0.3.4"; sha256="19adi96xh35vlsfsg3m2lm4szwhdb1m38ja3agdzwgryzh6xgzyc"; depends=[assertthat data_table ggplot2 hal9001 haldensify latex2exp lspline mvtnorm Rdpack stringr tibble]; }; + twowaytests = derive2 { name="twowaytests"; version="1.1"; sha256="00wz8l4ginv1pp1dbjwqbmn4q8i8fnmhz8x3v6riffndw5ag22f2"; depends=[car ggplot2 nortest onewaytests]; }; + txshift = derive2 { name="txshift"; version="0.3.5"; sha256="1xb1dcp2jsnh1qn7by36kjjh94q9mr197nzxpnl5m6ql9kspgjz5"; depends=[assertthat cli data_table ggplot2 hal9001 haldensify latex2exp lspline mvtnorm Rdpack scales stringr tibble]; }; txtplot = derive2 { name="txtplot"; version="1.0-4"; sha256="00sriml48y70j18jz235dsfm5x3a81bnzskfp3hnv6cbjwwsmca4"; depends=[]; }; - txtq = derive2 { name="txtq"; version="0.2.3"; sha256="03pa5mj5ijzvyzzjr9l84xrz4kdam4w90l7apgjwxgnag3p3c0p8"; depends=[base64url filelock R6]; }; + txtq = derive2 { name="txtq"; version="0.2.4"; sha256="1fvjprcwfqbw9c4sqcxv8r0jgvqmkip6d86r3cgrhwyic1ndk1l5"; depends=[base64url filelock R6]; }; + typed = derive2 { name="typed"; version="0.0.1"; sha256="096rzsxjdycf55jx33cxk1284rzb2vcxvp298y4q6v9x0w36php3"; depends=[waldo]; }; types = derive2 { name="types"; version="1.0.0"; sha256="01shcin8wjbhbmzl979fj3008xqxssw90g3bjg42cnjxkmnaql59"; depends=[]; }; + tzdb = derive2 { name="tzdb"; version="0.1.1"; sha256="0ym5rh6abs8ash6xz0av0gfhsjp7k1lgnjvpba36zwrxyfg2wrqi"; depends=[cpp11]; }; tzupdater = derive2 { name="tzupdater"; version="0.1.2"; sha256="0s1simvn76m569iq24qb3w6xli0202cjf1jr3a4qy58fs4sda2kv"; depends=[]; }; uCAREChemSuiteCLI = derive2 { name="uCAREChemSuiteCLI"; version="0.2.0"; sha256="1nccgkxv57inhgvgmhwm4fr8cp28sj8n83za5gam9xx1f42mzsqk"; depends=[ChemmineR usethis]; }; uFTIR = derive2 { name="uFTIR"; version="0.1.2"; sha256="1ds2ip02f4jh2i0n9f22v4c62xr82cak69w7yjf1k014rzq1yp60"; depends=[raster Rcpp RcppArmadillo rgdal sp]; }; - uGMAR = derive2 { name="uGMAR"; version="3.2.6"; sha256="09v6hijky5dbn9bam1gq5qi56wk4mv09jjyg0srf3jdjcq2d8w6w"; depends=[Brobdingnag pbapply]; }; + uGMAR = derive2 { name="uGMAR"; version="3.3.0"; sha256="02q9v527v9dhmc6c4sf89amrldxzphmh5dfh0y51cpsz0977rld4"; depends=[Brobdingnag gsl pbapply]; }; uHMM = derive2 { name="uHMM"; version="1.0"; sha256="1516ipadxi7rc1dbinr5rva2fbcr5i2zg3rlli5wy7r6naf8fzzl"; depends=[chron class cluster clValid corrplot FactoMineR HMM tcltk2 tkrplot]; }; uaparserjs = derive2 { name="uaparserjs"; version="0.3.5"; sha256="0v24smgsz1p2wa23mc2llx7dycwmgf7zyxdhwxgwplabpmy3xzhl"; depends=[progress V8]; }; uavRmp = derive2 { name="uavRmp"; version="0.5.7"; sha256="04dv1a72b0v8lgdwl10n96953gfal6pmbbih45szdvk4zhks030j"; depends=[brew data_table exifr geosphere jsonlite link2GI log4r raster rgdal rgeos rlang rlist sf sp zoo]; }; - ubiquity = derive2 { name="ubiquity"; version="1.0.3"; sha256="1k0l6ai8fgjqch1hic9nzmj8dnf91y83wfgw13q56r6lvnp3rhdi"; depends=[deSolve digest doParallel dplyr flextable foreach ggplot2 gridExtra knitr MASS officer optimx PKNCA pso readxl rhandsontable rmarkdown rstudioapi shiny stringr]; }; + ubiquity = derive2 { name="ubiquity"; version="1.0.5"; sha256="14kvy0dq6i5zf5bqyxvvd3jk3zp5i4hl81zf5di237f5dgsdvbif"; depends=[deSolve digest doParallel dplyr flextable foreach ggplot2 gridExtra knitr magrittr MASS officer optimx PKNCA pso readxl rhandsontable rmarkdown rstudioapi scales shiny stringr]; }; + ubms = derive2 { name="ubms"; version="1.0.2"; sha256="1fsmyhn9awx3pa32yqnkjykyj0kbj5hc3q4w0dzjbl2ywawjbqr7"; depends=[BH ggplot2 gridExtra lme4 loo Matrix Rcpp RcppArmadillo RcppEigen rstan rstantools StanHeaders unmarked]; }; ucbthesis = derive2 { name="ucbthesis"; version="1.0"; sha256="0l855if3a7862lxlnkbx52qa617mby634sbb2gkprj21rwd7lcbp"; depends=[knitr stringr]; }; uchardet = derive2 { name="uchardet"; version="1.1.0"; sha256="1dnvi45npk7l7sqbv3c1mrg0m7vrrp7iya9kjndcg9x3h0iial9z"; depends=[]; }; uclust = derive2 { name="uclust"; version="0.2.0"; sha256="1hvyrkah0yfia5wwr42q6axja56qwnils84pg25znq39fjly6hjf"; depends=[dendextend robcor]; }; @@ -16259,10 +16907,11 @@ in with self; { udapi = derive2 { name="udapi"; version="0.1.3"; sha256="0qyn6fdh8ia913hn2dl0x99xsm20ps8zm52snswlyb00prinm668"; depends=[curl httr]; }; udpipe = derive2 { name="udpipe"; version="0.8.5"; sha256="021n28jncfiv7492dj1ik6ylkhb3s2hpgjpc0y2zv4cdnl362zcx"; depends=[data_table Matrix Rcpp]; }; udunits2 = derive2 { name="udunits2"; version="0.13"; sha256="0yav7rm2afcx67xqrknybxgz7x63w78zyxa0xifvc0k2gz0d6mfi"; depends=[]; }; - ufs = derive2 { name="ufs"; version="0.4.0"; sha256="07awbavaa07dph560q045hgimqwhs87a7bfqnlvgiqhbvjlb8wwm"; depends=[digest diptest dplyr ggplot2 ggrepel ggridges gridExtra gtable htmltools kableExtra knitr pander plyr rmdpartials scales SuppDists viridis]; }; + ufs = derive2 { name="ufs"; version="0.4.3"; sha256="0gbmy7viwn55cj6z44aals02bvci0g6y2ya6x7fvjz3s4v3digd1"; depends=[digest diptest dplyr ggplot2 ggrepel ggridges gridExtra gtable htmltools kableExtra knitr pander plyr rmdpartials scales SuppDists]; }; ui = derive2 { name="ui"; version="0.1.1"; sha256="15hcdzaj75ip6j7yglx8rqhp4y3yf3aw5cpbjgk1mjr4cya7lvzi"; depends=[Matrix maxLik mvtnorm numDeriv]; }; uiucthemes = derive2 { name="uiucthemes"; version="0.3.1"; sha256="1faggg8hiqw4pblq5r3m9wi3x5m6kbjq0flf88mqa993v9rpdrf6"; depends=[rmarkdown xaringan]; }; - ukbabynames = derive2 { name="ukbabynames"; version="0.1.1"; sha256="0vrwcf3hixd40ag6kb289anq2ys2k6vdhhsrjbizvndkyn8sr0r0"; depends=[]; }; + uk2us = derive2 { name="uk2us"; version="0.1.0"; sha256="1iskjfifksx9gh94zwh4kk7l984804fidzg4j1k2ww9a4j63rk19"; depends=[]; }; + ukbabynames = derive2 { name="ukbabynames"; version="0.2.0"; sha256="1yggm3cv32bbshkmqvzd6pdgclk7w329dd1ghslicllaj98cni8k"; depends=[]; }; ukbtools = derive2 { name="ukbtools"; version="0.11.3"; sha256="1j5p9ypn3s781582all64kvywih1ry0lqsh1zirr35g7r46fy783"; depends=[data_table doParallel dplyr foreach ggplot2 magrittr purrr readr scales stringr tibble tidyr XML]; }; ukgasapi = derive2 { name="ukgasapi"; version="0.21"; sha256="1acl04bm8f2hgi26mpmzcwp44yv9zxarzw4r4k20b367k8g9rh8a"; depends=[httr XML]; }; uklr = derive2 { name="uklr"; version="1.0.1"; sha256="0pr0qyf8zr8z1hzv8wziw9wddajja5dggs9cc9dw91v0kq5g5ris"; depends=[curl httr jsonlite tibble]; }; @@ -16270,31 +16919,32 @@ in with self; { ulid = derive2 { name="ulid"; version="0.3.0"; sha256="0xxkqrnlz3pkb3s1gacfzqav54w97gc0w8rh0fn1qy5rkmg2bplv"; depends=[Rcpp]; }; umap = derive2 { name="umap"; version="0.2.7.0"; sha256="191vpy84s0bar06y9z1qx43x2kc4qp7lmrcmd0cvz2pnzq722jab"; depends=[openssl Rcpp reticulate RSpectra]; }; ump = derive2 { name="ump"; version="0.5-8"; sha256="1sg226caq9y41cwl7wr5s9z3bpq2j5p6rj6fy2pasbzimgzw0byx"; depends=[]; }; - umx = derive2 { name="umx"; version="4.2.5"; sha256="0kr1csakxfk9jz55i1hw3vxck1h1xkbppvk33zdhx0szc10xpz1l"; depends=[cowplot DiagrammeR ggplot2 kableExtra knitr lavaan MASS Matrix MuMIn mvtnorm nlme OpenMx polycor R2HTML RCurl scales xtable]; }; + umx = derive2 { name="umx"; version="4.3.0"; sha256="1gf326l5w2kqr8gi6kz9avvkm4aziccn9vpy2pbd1ha5c6vqf6cb"; depends=[cowplot DiagrammeR DiagrammeRsvg ggplot2 kableExtra knitr lavaan MASS Matrix MuMIn mvtnorm nlme OpenMx polycor R2HTML RCurl rsvg scales xtable]; }; unbalanced = derive2 { name="unbalanced"; version="2.0"; sha256="18hy9nnq42s1viij0a5i9wzrrfmmbf7y3yzjzymz2wnrx4f2pqwv"; depends=[doParallel FNN foreach mlr RANN]; }; unbalhaar = derive2 { name="unbalhaar"; version="2.0"; sha256="0v6bkin1cakwl9lmv49s0jnccl9d6vdslbi1a7kfvmr5dgy760hs"; depends=[]; }; uncertainty = derive2 { name="uncertainty"; version="0.2.0"; sha256="1mq14ny7l3gy3wjsqijnm37azavyapxszjnckd861h4hgcpdcdjz"; depends=[mvtnorm triangle]; }; - uncmbb = derive2 { name="uncmbb"; version="0.2.1"; sha256="0ilbsl6hww613i6in9x4v8knx9vlv6hiycgl2879aiq456ghx91m"; depends=[dplyr rlang]; }; + uncmbb = derive2 { name="uncmbb"; version="0.2.2"; sha256="0szlz52p0ywl8526mhm0i0pk1vx72kc3474cx0w47xxig83a1j9b"; depends=[dplyr rlang]; }; understandBPMN = derive2 { name="understandBPMN"; version="1.1.1"; sha256="04wnyxplrn5c6jb76dw25pawwcvvn5xq80lqn5imsf31nbwybpm5"; depends=[devtools dplyr purrr R_utils Rcpp tibble tidyr usethis XML]; }; unfoldr = derive2 { name="unfoldr"; version="0.7"; sha256="18qjsmlbqy9nhwyv288r9n3plv22fgb4g73jpyjyzy3hzfamcb17"; depends=[]; }; - unga = derive2 { name="unga"; version="0.1.0"; sha256="09ibmdaifzhb61nkjpgigr6mhp2d4gk00l0fyqwsz3njwy3sqw0f"; depends=[]; }; unglue = derive2 { name="unglue"; version="0.1.0"; sha256="0w8ld4xllx0lj1jz8i2sj92f8136hlwri1d8ldpg1ymxj7aw93vg"; depends=[]; }; - unheadr = derive2 { name="unheadr"; version="0.3.0"; sha256="1wrrmxndlqzn18dnkwcm3bc4mmxminxag27wclhviscaycybhy43"; depends=[dplyr forcats magrittr readxl rlang stringr tibble tidyr tidyxl]; }; + ungroup = derive2 { name="ungroup"; version="1.3.0"; sha256="1q8082zmaplad7ypdyffjn41697r517awav78gqn816mmy3wlsvz"; depends=[Matrix pbapply Rcpp RcppEigen Rdpack rgl]; }; + unheadr = derive2 { name="unheadr"; version="0.3.2"; sha256="1fj8108fifjswl8jx4f8jd59g4sqhryhsci978ysn72z663nflxl"; depends=[dplyr forcats magrittr readxl rlang stringr tibble tidyr tidyxl]; }; + uni_survival_tree = derive2 { name="uni.survival.tree"; version="1.5"; sha256="1brkppsk7likpffzz0ykhqxw99qin57zzcjcib2fcdn3n8gpwq7w"; depends=[compound_Cox survival]; }; uniReg = derive2 { name="uniReg"; version="1.1"; sha256="0wjc7pgaisvk26j7grxp2ypsabb5my9wg6c9i5w9zhh5jdx1fdab"; depends=[DoseFinding MASS mvtnorm quadprog SEL]; }; uniah = derive2 { name="uniah"; version="1.0"; sha256="19zwy33gwa749i81mi9h05k8k3l4xbbln3k6q70fa7ic5lqbbdzj"; depends=[ahaz Iso survival]; }; unifDAG = derive2 { name="unifDAG"; version="1.0.3"; sha256="052qjrnj04imhj6i62k8jdx9rs8r70n0qrmd2z45x4fimn5py6j5"; depends=[gmp graph]; }; - unifed = derive2 { name="unifed"; version="1.1.3"; sha256="0krxw4hy93a9qq78hwsc39rscbz6j8rr5qhplca0ska1xp36p09f"; depends=[]; }; + unifed = derive2 { name="unifed"; version="1.1.5"; sha256="1gc5ny878i1rsr6hxjrf22pgkz1p3him464h2ax6lpidif4d1nbh"; depends=[]; }; uniformly = derive2 { name="uniformly"; version="0.1.0"; sha256="0n3s0x05v4d79jn51nwj06gm074rgy269f57y2q5z0bkwyp6yc7n"; depends=[pgnorm]; }; uniftest = derive2 { name="uniftest"; version="1.1"; sha256="0a37m7l3lc6rznx10w9h9krnn5paim2i2wvw47ckwag7bv0d4pm4"; depends=[orthopolynom]; }; - unikn = derive2 { name="unikn"; version="0.3.0"; sha256="06pyabyjwdyzn4fh04jg4lafricl5877rwvf3fxdv0ldp6nymq8v"; depends=[ggplot2]; }; + unikn = derive2 { name="unikn"; version="0.4.0"; sha256="0pqkb48rsjl9zny0y1plcnfvzaaqy2cwpgii2pdhh4rfg2ps2n4l"; depends=[ggplot2]; }; unine = derive2 { name="unine"; version="0.2.0"; sha256="051dk8fss19h4d9815a7994krr1s3n5q0pxq9gir6zns0vvn05pw"; depends=[Rcpp]; }; uniqtag = derive2 { name="uniqtag"; version="1.0"; sha256="025q71mzdv3n1jw1fa37bbw8116msnfzcia01p1864si04ch5358"; depends=[]; }; unisensR = derive2 { name="unisensR"; version="0.3.3"; sha256="1pqfb8i3rj64l9hh1bn9mm78wlfqphgrlp7zrydznqy88f4jwgvy"; depends=[hexView vroom XML]; }; unitedR = derive2 { name="unitedR"; version="0.4"; sha256="0h4i814awb8419693jz3x5cyhs2x6y5flmz339bg6ivmg13d9h3s"; depends=[plyr]; }; - unitizer = derive2 { name="unitizer"; version="1.4.12"; sha256="0m8vyyr1gl33kvj20x0zvrr01qm1n5a2c2w6x58ndc3s2hsjlx3c"; depends=[crayon diffobj]; }; - units = derive2 { name="units"; version="0.6-7"; sha256="1rdpbkiqcabz00fqzzs98v89v4cgvcd4pb00pwxzkq6vmwmscwrz"; depends=[Rcpp]; }; + unitizer = derive2 { name="unitizer"; version="1.4.14"; sha256="1j25qzn2gs9hwbi60vjxy5vg7d3chhpfv8n7jm79zkr88rxifils"; depends=[crayon diffobj]; }; + units = derive2 { name="units"; version="0.7-1"; sha256="0wwndzjjgqj795xvx1jwa86nwd8adfiwj0pn15yyzzk9baky2axw"; depends=[Rcpp]; }; unittest = derive2 { name="unittest"; version="1.4-0"; sha256="1wyiikccnkw8fzrjrb2a80lw2xyiii4zb0hrbzfszy2bd6prqxx4"; depends=[]; }; - univOutl = derive2 { name="univOutl"; version="0.2"; sha256="0rlc3w7cx2hfxacpjs9kmjzv5p8v9wxnlpxi3rh276wiy5zdr91v"; depends=[Hmisc robustbase]; }; + univOutl = derive2 { name="univOutl"; version="0.3"; sha256="1hhpxrpmp2wbrynx9xjndnp2sccirgky2x6ksd6yk6phmk0rbzjp"; depends=[Hmisc robustbase]; }; unival = derive2 { name="unival"; version="1.0.2"; sha256="1sw0z7dmicmka3znrc1c5v0s9g8cpqapacdjzl5i4k5ak2qq35qp"; depends=[optimbase psych]; }; univariateML = derive2 { name="univariateML"; version="1.1.0"; sha256="1bnpb1g6hm8p3q73kyb4mxijzj53cfp38ns98bq12m9yvsjq1c4n"; depends=[actuar assertthat extraDistr fGarch logitnorm nakagami tibble]; }; universals = derive2 { name="universals"; version="0.0.4"; sha256="1dx7xh5l2dkamskpwfc9qsjf7df1fj54ph6s3sxhnhdbppzckd4d"; depends=[]; }; @@ -16305,24 +16955,27 @@ in with self; { unpivotr = derive2 { name="unpivotr"; version="0.6.1"; sha256="1xh1m6f8gr37r14kbhnmb5a5dfammd4x9ci7p782b6r9ymnjq13p"; depends=[cellranger dplyr forcats magrittr pillar purrr rlang tibble tidyr tidyselect xml2]; }; unrepx = derive2 { name="unrepx"; version="1.0"; sha256="1dzvwpza60y9p7kz1f0bm20wid5jyxx9pma4w41az9shq5kkr0aj"; depends=[]; }; unrtf = derive2 { name="unrtf"; version="1.4"; sha256="0ri68vfhc0acizjsk62v4l1g6l773y955yhcbqgks0vbrk01yfxg"; depends=[sys]; }; + unstruwwel = derive2 { name="unstruwwel"; version="0.1.0"; sha256="1g7vw7hbf390hrsi5n9fj8na9rlaxc4d952949ffb0r81rr4blf1"; depends=[assertthat dplyr lubridate magrittr purrr R6 rlang stringr tibble tidyr]; }; unsystation = derive2 { name="unsystation"; version="0.2.0"; sha256="02da7wzzk5bwd475i67v5x04ay2bn5yd5xffl1asqcqxcc5sy0m8"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; untb = derive2 { name="untb"; version="1.7-4"; sha256="1i7m4vfslsix98dwx4jlrsldm7fhhfp25gr7aapcxqxms7ryaby6"; depends=[Brobdingnag partitions polynom]; }; - unvotes = derive2 { name="unvotes"; version="0.2.0"; sha256="0wanvivwm1nmqadq2vapg27kasnjnr0a4np2kw54wj9pg21izqic"; depends=[]; }; + unvotes = derive2 { name="unvotes"; version="0.3.0"; sha256="1vfyvwqfbxp29x2a0sqng6l5pkp2hc3hadp95ysnpannnsd6x0jw"; depends=[]; }; updog = derive2 { name="updog"; version="2.0.2"; sha256="0xyr4kckg185slwrq46j1qp6z0h965zk6yy55zw2h3wd3gm0cbwa"; depends=[assertthat doParallel foreach ggplot2 ggthemes Rcpp RcppArmadillo reshape2]; }; uplift = derive2 { name="uplift"; version="0.3.5"; sha256="11xikfmg6dg8mhwqq6wq9j9aw4ljh84vywpm9v0fk8r5a1wyy2f6"; depends=[coin MASS penalized RItools tables]; }; uplifteval = derive2 { name="uplifteval"; version="0.1.0"; sha256="1gnn40c47rpx40j210bz6fb48d70p6spv3drr8hd5b3vzfz6686c"; depends=[dplyr ggplot2 gridExtra whisker]; }; - upsetjs = derive2 { name="upsetjs"; version="1.6.0"; sha256="0zmkp9md0pzdzq348m25y26z4yvsqkdb0vfz3246xqr5bvkmj1c0"; depends=[htmlwidgets magrittr]; }; + upsetjs = derive2 { name="upsetjs"; version="1.9.0"; sha256="0xyy3022810yw0yb8n0cn1gaapizyq1vxadj5inrry5azk8a1kig"; depends=[htmlwidgets magrittr]; }; + upstartr = derive2 { name="upstartr"; version="0.1.1"; sha256="09xzj423v0x4qvqfgyqpxyg63p8f1n5ppjc8swpyv1747ll5zmg8"; depends=[beepr crayon dplyr ggplot2 glue here knitr librarian magrittr openxlsx purrr readr readxl rmarkdown scales sf stringr textclean tgamtheme tidytext]; }; uptasticsearch = derive2 { name="uptasticsearch"; version="0.4.0"; sha256="19sf3zdj424pz4ms0xg4asplf2bczvhl8p22y13jna1g51xyv92a"; depends=[assertthat data_table futile_logger httr jsonlite purrr stringr uuid]; }; uptimeRobot = derive2 { name="uptimeRobot"; version="1.0.0"; sha256="1sbr0vs6jqcyxjbs7q45bsfdnp3bc59phw0h3fwajqq1cxjgzdww"; depends=[plyr RCurl rjson]; }; - uqr = derive2 { name="uqr"; version="1.0.0"; sha256="0f7isjfb5almp1zypxzw3lfkygkcixmg0xdsw0zznf61r6qhbqyr"; depends=[gtools Hmisc]; }; + urbin = derive2 { name="urbin"; version="0.1-12"; sha256="18zskhpcngpw0zanya88l8znhbac5f7a89kq231w59yml9ll7y52"; depends=[]; }; urca = derive2 { name="urca"; version="1.3-0"; sha256="1akaqwf3fvvvx4sgfn641fd4sj51s0701pvfl6s5hnz2k0iwh732"; depends=[nlme]; }; + urlchecker = derive2 { name="urlchecker"; version="1.0.0"; sha256="03rjgsi344d6kacx4l2wh91gp269hddd5q567c9r52glbjp382d8"; depends=[cli curl xml2]; }; urlshorteneR = derive2 { name="urlshorteneR"; version="1.4.3"; sha256="168y1mdxhn7lhhzmzw9a7h4g9xpwh294wl53aaqp23s486p46pdz"; depends=[assertthat cli clipr httr jsonlite lubridate miniUI shiny stringr]; }; urltools = derive2 { name="urltools"; version="1.7.3"; sha256="04x3my655dd287cbsszbnf75q0swmjlxxrblcsay7a8n3df3a830"; depends=[Rcpp triebeard]; }; uroot = derive2 { name="uroot"; version="2.1-2"; sha256="0dsb1vdr2bwy64v889svhvkadg5jl9cl77mfiw79vl18b7ixjzxx"; depends=[]; }; ursa = derive2 { name="ursa"; version="3.9.2"; sha256="0q6hnyw0gl6qipyi7s461w1i49akdvhi8ijyd8raxdizhcsqyxla"; depends=[jpeg png rgdal]; }; us_census_geoheader = derive2 { name="us.census.geoheader"; version="1.0.2"; sha256="17mss1ggaqkd0ac7g9chgqdrpi5xlbfkxsm1jvj48rp2jfwpp4jw"; depends=[tibble]; }; usa = derive2 { name="usa"; version="0.1.0"; sha256="0scdrd6b48n019f7qp77rrkqgmapnrknalq0hml1cy7m43llqf6d"; depends=[tibble]; }; - usdampr = derive2 { name="usdampr"; version="1.0.0"; sha256="1kz4yaxhzpbyw1vjgfs4cps2s13w2m6fa0k81q8j89a3xl36wzhw"; depends=[dplyr httr jsonlite tidyr]; }; + usdampr = derive2 { name="usdampr"; version="1.0.1"; sha256="0x84hzsylg22jhvhn4xhkzv4g8j17g73cpj274n7f8cwzcmpj9sx"; depends=[dplyr httr jsonlite tidyr]; }; usdarnass = derive2 { name="usdarnass"; version="0.1.0"; sha256="10fh9anpmbb7i70q3hjxbplrkqa1q86zgh8nldsf2i526p62hpm1"; depends=[httr jsonlite readr]; }; usdata = derive2 { name="usdata"; version="0.1.0"; sha256="1qlk530biab63wk7v0f8pw80b4v3wsmlrw7k45n8gjh2a1r42xh7"; depends=[tibble]; }; usdm = derive2 { name="usdm"; version="1.1-18"; sha256="1sis47fri2lrbx2ll5ps7bvycjqhncnia800izf11szgayim5lrv"; depends=[raster sp]; }; @@ -16330,23 +16983,22 @@ in with self; { useful = derive2 { name="useful"; version="1.2.6"; sha256="0n50v1q75k518sq23id14jphwla35q4sasahrnrnllwrachl67v1"; depends=[assertthat dplyr ggplot2 magrittr Matrix plyr purrr scales]; }; usefun = derive2 { name="usefun"; version="0.4.8"; sha256="0jbwfr04y65rlc2aa6483w9qcdqa4bmcx76j4rp9fracfszjb1hg"; depends=[dplyr]; }; usemodels = derive2 { name="usemodels"; version="0.1.0"; sha256="17cnjg7vw3f2jxkqlfvxh6kn891h49waf5k5a5vb4yaa2ay6nhp3"; depends=[cli dplyr purrr recipes rlang tidyr tune]; }; - userfriendlyscience = derive2 { name="userfriendlyscience"; version="0.7.2"; sha256="17arxxha8qr876nrf9szpymgamxlvacj3lfbmpiv973kyi3hr7m4"; depends=[BiasedUrn car data_tree DiagrammeR digest diptest GGally ggplot2 ggrepel ggridges GPArotation gridExtra gtable knitr lavaan lme4 MASS MBESS minpack_lm pander plyr psych pwr RColorBrewer rio scales SCRT SuppDists ufs viridis XML xtable]; }; - usethis = derive2 { name="usethis"; version="2.0.0"; sha256="0m4qnnkdiizsdvq33x502zwkn98hw2qcfm45cjj031vaydcjpai2"; depends=[cli clipr crayon curl desc fs gert gh glue jsonlite lifecycle purrr rappdirs rlang rprojroot rstudioapi whisker withr yaml]; }; + usethis = derive2 { name="usethis"; version="2.0.1"; sha256="1j6nzzrm2m6vi1gq0d5kxnnr9d8cy88wpmgigz3inych65x9w9pg"; depends=[cli clipr crayon curl desc fs gert gh glue jsonlite lifecycle purrr rappdirs rlang rprojroot rstudioapi whisker withr yaml]; }; usfertilizer = derive2 { name="usfertilizer"; version="0.1.5"; sha256="05zjn39hqjjzzp4v4b1zbqq59205s7k0kikms951h57kbyvjz6vk"; depends=[tidyverse]; }; ushr = derive2 { name="ushr"; version="0.2.3"; sha256="1ygyqgxw849165lpk81f114kgx9015b9a9dngavjy3ffqzrbb41k"; depends=[dplyr ggplot2 tidyr]; }; uskewFactors = derive2 { name="uskewFactors"; version="2.0"; sha256="0ndi5987ak8sa7krgiglsibfg0k7z9j8fg47hg1m8ar0sq4r1yj6"; depends=[MASS MCMCpack mvtnorm tmvtnorm]; }; usl = derive2 { name="usl"; version="3.0.0"; sha256="1ahry485kpzfc0pzi4zm039d5mpv1jycmhdpn0n0zn0drcrlhw0g"; depends=[nlsr]; }; - usmap = derive2 { name="usmap"; version="0.5.1"; sha256="1vbariw50h1l2225101zzrvpn5n2ih4f06v8d3x5n98qrzv8xhyr"; depends=[]; }; + usmap = derive2 { name="usmap"; version="0.5.2"; sha256="0p9f2g3nslxhvm8q7zwwfdw892fxnikr1x06z6rxnkibm4k48dj0"; depends=[]; }; ustyc = derive2 { name="ustyc"; version="1.0.0"; sha256="1267bng2dz3229cbbq47w22i2yq2ydpw26ngqa1nbi3ma6hwqsv4"; depends=[plyr XML]; }; utc = derive2 { name="utc"; version="0.1.5"; sha256="1lhm5rhr78cxp3cz5n6j2zkhjphj7csk026xvvhkjqdi39rrq6i4"; depends=[]; }; - utf8 = derive2 { name="utf8"; version="1.1.4"; sha256="0m0ywg8k3blfiahxvh1i4zn9dksrlc937d2lbza5fc38zjnrrnpn"; depends=[]; }; + utf8 = derive2 { name="utf8"; version="1.2.1"; sha256="1yw7vjn3gpkqddc91rbfh4kk0zmn2kp0jycrd3066sissh01jhdk"; depends=[]; }; utile_tables = derive2 { name="utile.tables"; version="0.2.1"; sha256="0bj3rg4f9dby7qzf0m95dg626ws4nz5v2vn3m50x8g3pqq8m7lmp"; depends=[dplyr purrr rlang tidyselect utile_tools]; }; utile_tools = derive2 { name="utile.tools"; version="0.2.6"; sha256="1l3l6x37290ism459kjfbgm2s0w7sa84q93nzrij1z250gv6g0rp"; depends=[lubridate purrr vctrs]; }; - utile_visuals = derive2 { name="utile.visuals"; version="0.2.5"; sha256="0rj0pbpnsalhb89rqr0k4lxkxa159h7vaarvpp1pb8vmcf8vrdjh"; depends=[dplyr ggplot2 gridExtra purrr]; }; + utile_visuals = derive2 { name="utile.visuals"; version="0.3.0"; sha256="1653wds2126b82bfm22a17xgrkybw6an5j3apg53ag5ykak9pg87"; depends=[dplyr ggplot2 gridExtra purrr]; }; + utilities = derive2 { name="utilities"; version="0.1.0"; sha256="1pslpch24i71m0bhh5fkyrznmhrf91iy838yw2xswjxglwlhq9hx"; depends=[]; }; utility = derive2 { name="utility"; version="1.4.5"; sha256="0a11bxyg8la6yvxr04qbhay05jb2ihd7calc1zcisgj43kq6k7xd"; depends=[]; }; - utilityFunctionTools = derive2 { name="utilityFunctionTools"; version="0.1.0"; sha256="1xi1dgjijnm84c8pk8d4ag5bzsxxdzrwkbzj7v5nwwmx47fn3cby"; depends=[spatstat]; }; + utilityFunctionTools = derive2 { name="utilityFunctionTools"; version="0.1.1"; sha256="1225nl83yka31j0adm1210kc89vs3hi9i2pqrykax109sgk0nw97"; depends=[spatstat_geom]; }; utilsIPEA = derive2 { name="utilsIPEA"; version="0.0.6"; sha256="07avc0j6qkzqmznbydn0zdg743g7g7kn2bcx5n03m3wg0fqyggr7"; depends=[data_table dplyr RCurl stringdist stringr]; }; - utiml = derive2 { name="utiml"; version="0.1.6"; sha256="1djagxmsni685ps0nhbvwgncxj883qck0wfcwhrl5h714zq39a0j"; depends=[mldr ROCR]; }; uuid = derive2 { name="uuid"; version="0.1-4"; sha256="0gm9ii7ncvllxbvyk6srsiinjmqyj7lmh84w43x4nhqpvafj9q4q"; depends=[]; }; uwo4419 = derive2 { name="uwo4419"; version="0.3.0"; sha256="0hk5qhyarjxz7ngj5ak37vx0rak6xv0hfb4sdrsbci3kv5fqijv7"; depends=[DescTools dplyr ggplot2 gmodels haven magrittr psych RColorBrewer rio tibble tidyr]; }; uwot = derive2 { name="uwot"; version="0.1.10"; sha256="08vxh085wnrxgwy35ksb4cr7ccjvd98pyr2zlgarqryfgc1bdqbf"; depends=[dqrng FNN irlba Matrix Rcpp RcppAnnoy RcppProgress RSpectra]; }; @@ -16357,27 +17009,31 @@ in with self; { vaersvax = derive2 { name="vaersvax"; version="1.0.5"; sha256="0bfbpdjnykvb9r0p28bz8lrqxksy4jvwnd28y6gdlprpisiipiic"; depends=[]; }; vagalumeR = derive2 { name="vagalumeR"; version="0.1.6"; sha256="0zakpg5p9kif61d35as08f2dac3wncyvhpc83rqjp96g99wjf701"; depends=[dplyr httr jsonlite magrittr purrr stringr]; }; vagam = derive2 { name="vagam"; version="1.1"; sha256="1bgpf0z23yqyaz7dfmqilyqvr5v4w891027xrlr0mk9grj4srmiq"; depends=[gamm4 Matrix mgcv mvtnorm truncnorm]; }; - valaddin = derive2 { name="valaddin"; version="1.0.0"; sha256="0dws2mcjpyw0jn0h6badhlnxg88c6mgzvcp2fjjrpr5mpcgps1c8"; depends=[lazyeval]; }; + valaddin = derive2 { name="valaddin"; version="1.0.1"; sha256="15j1zkmxf11706hrjhn6vh2h9zmlcdihrxqyxflp3kah9an0hldm"; depends=[lazyeval]; }; valection = derive2 { name="valection"; version="1.0.0"; sha256="0104zcg3cw57ksgmb321hnyv095mn3frxci9vikj1smwarpnrpzc"; depends=[testthat]; }; + valhallr = derive2 { name="valhallr"; version="0.1.0"; sha256="1lgdcvbk5g8xq9b18aqfq434cvdcshl3b6s28sx4r3jb8fxkia26"; depends=[Cairo dplyr geojsonio ggplot2 ggspatial htmltools httr jsonlite leaflet magrittr purrr rlang sf stringr tibble tidyr]; }; validann = derive2 { name="validann"; version="1.2.1"; sha256="00c0hkjiv8n7mksx6sknb4xkkivxr1ml31k697csv4imwrk09dy5"; depends=[moments]; }; - validate = derive2 { name="validate"; version="1.0.1"; sha256="0x4ryrjlkbr776pam55a1j78qxw7djm9ly552ghsfcx7lqgcmgh4"; depends=[settings yaml]; }; + validate = derive2 { name="validate"; version="1.0.4"; sha256="18kbg00c7zrxpklbw6xglhp4bzb7nxs6x93m8h2fm64k4i21sdyf"; depends=[settings yaml]; }; validateRS = derive2 { name="validateRS"; version="1.0.0"; sha256="1ivw9ddr6z2wrsqvhbn87p5pikhkxlz8p45pb5nq13dvs359vkww"; depends=[data_table reshape2 triangle truncnorm]; }; + validatedb = derive2 { name="validatedb"; version="0.1.3"; sha256="1hxgbrzagp2ixxq0ddahs1gip33bpnmnqrrng3bsgh3cxmz80xpr"; depends=[dbplyr dplyr validate]; }; validatetools = derive2 { name="validatetools"; version="0.5.0"; sha256="10wardp2c70zx5ii940sjql3xh5p3vqxv4ayyifhhlr8vzvr5cj0"; depends=[lpSolveAPI validate]; }; + valmetrics = derive2 { name="valmetrics"; version="1.0.0"; sha256="1fdaljdfvfmqarxdyjs9pcd8ji2z9i379vcxf65jvnhiaqlsms57"; depends=[]; }; valorate = derive2 { name="valorate"; version="1.0-1"; sha256="06vczszpkipsxfs7h6ld33vvxb5ci62rwg3cglwy3lcfifhbnsfi"; depends=[survival]; }; valottery = derive2 { name="valottery"; version="0.0.1"; sha256="0rlv8agm9ng4jcb9ixqifh7kjczvkx7047brq8yf9kg7rb8mzgpz"; depends=[]; }; valr = derive2 { name="valr"; version="0.6.2"; sha256="1vbp89zfylgih5acvw7lcx3a0dbbd7dhq7yhywr7kq02737qykdx"; depends=[broom dplyr ggplot2 Rcpp readr rlang stringr tibble]; }; - valueEQ5D = derive2 { name="valueEQ5D"; version="0.6.1"; sha256="1djsm30nfcz2si29yb44y5h8dlp5cxf61ippbrka5v8r56l9zpls"; depends=[rstudioapi testthat]; }; + valueEQ5D = derive2 { name="valueEQ5D"; version="0.7.1"; sha256="1g2jq1qks1fixc8w031cbcdqmz64a7p1gmc731m9q0bawfibsyw4"; depends=[testthat]; }; valuer = derive2 { name="valuer"; version="1.1.2"; sha256="0mbwzsvy34ppngyxdzpd9w1r4f00cik4maqab9kpiflrrv9xdp78"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; }; vamc = derive2 { name="vamc"; version="0.2.1"; sha256="04kkli4xzf3gzvs215lzch8bl877cdq3awh3mz1k321zhsa1d0jn"; depends=[Rdpack]; }; vampyr = derive2 { name="vampyr"; version="1.0.6"; sha256="1iqlb948wvwxf69588qz0hmc1fsmbqp058qbvrzx817w3mhjcs63"; depends=[corpcor EFA_MRFA fungible GPArotation lavaan moments optimbase PCovR psych semPlot]; }; vanddraabe = derive2 { name="vanddraabe"; version="1.1.1"; sha256="094kd72slq0n3pk0p6zps241aszb9yql49h4mr007zf0kn8wlf8v"; depends=[bio3d cowplot fastcluster ggplot2 openxlsx reshape2 scales]; }; + vannstats = derive2 { name="vannstats"; version="1.0.4.15"; sha256="1q8h822dwv19qja7kfwn66zjibmykrfka6s4vsix1nnyprxxk3ra"; depends=[car dplyr ggplot2 gplots MASS purrr rlang tidyverse]; }; vanquish = derive2 { name="vanquish"; version="1.0.0"; sha256="01di1j36npl7vnyhgsagvyf6j8bxcw867dwf9dgi7l1328s7lf0l"; depends=[changepoint e1071 ggplot2 VGAM]; }; vapour = derive2 { name="vapour"; version="0.5.5"; sha256="0mcwb6dqiwqf55gsjmpzk9cb29axvwbs7gjgqlfv7xas3zlkh9zg"; depends=[Rcpp]; }; varEst = derive2 { name="varEst"; version="0.1.0"; sha256="0i6nsxl5w4zipzrmdvx8plmxr33n405w2qhks3s7zzs3kcys32v6"; depends=[caret glmnet lm_beta SAM]; }; varImp = derive2 { name="varImp"; version="0.4"; sha256="1bxlfqxi8iiv6raawl9668yhlmbak96ahd0ljzwrilnciqbclc2b"; depends=[measures party]; }; - varSel = derive2 { name="varSel"; version="0.1"; sha256="0ddj3swfxzchs75kfi6h25h3c33hpapnd5kcwcijnqhlh902b1r0"; depends=[]; }; + varSel = derive2 { name="varSel"; version="0.2"; sha256="05dk2s4lzd4sxrwsfs2yqsj08qrdrfwx1fs07nb9a8sd0in6vlpj"; depends=[]; }; varSelRF = derive2 { name="varSelRF"; version="0.7-8"; sha256="0h49rl1j13yfh97rsfsyh9s2c4wajny4rzms2qw77d0cavxqg53i"; depends=[randomForest]; }; - varTestnlme = derive2 { name="varTestnlme"; version="0.2.0"; sha256="0b9ygl2zfs3dl4bvzcrqd1ja08jy6bqr57ajjx3y83di6q7cb78l"; depends=[alabama anocva corpcor doParallel foreach lme4 lmeresampler Matrix matrixcalc merDeriv msm mvtnorm nlme quadprog saemix]; }; + varTestnlme = derive2 { name="varTestnlme"; version="1.0.0"; sha256="0blj0qxjgk24jzzwwydm749qahnsf9axn4j207d9cdszpr6xw1v0"; depends=[alabama anocva corpcor doParallel foreach lme4 lmeresampler Matrix matrixcalc merDeriv msm mvtnorm nlme quadprog saemix]; }; varband = derive2 { name="varband"; version="0.9.0"; sha256="16z66rx7xq5zan8pnw100c9r5syw1ml4hgzi9mch52aia23v21p9"; depends=[Rcpp RcppArmadillo]; }; varbin = derive2 { name="varbin"; version="0.2.1"; sha256="0gcynwc0vx7qlp3z0pcc4i7mjlnxkwy8ydxz2wr244fw32qgp4kq"; depends=[rpart]; }; varbvs = derive2 { name="varbvs"; version="2.5-16"; sha256="0pji7vqpbih01y7n0q6zpxhfszznzig4z3hmmpr4jqpdplv13x8d"; depends=[lattice latticeExtra Matrix nor1mix Rcpp]; }; @@ -16386,57 +17042,60 @@ in with self; { vardpoor = derive2 { name="vardpoor"; version="0.20.1"; sha256="0jqls76xhhxc5hppy3pq5wkj9gjx3g3pzfbhnis7k10ysn76a1qj"; depends=[data_table foreach laeken MASS stringr surveyplanning]; }; varhandle = derive2 { name="varhandle"; version="2.0.5"; sha256="1l42d0s6fbjjc9l28a2m3myxkrx2c0p0b9yj8wjjjgilw19yc3lv"; depends=[]; }; variability = derive2 { name="variability"; version="0.1.0"; sha256="1nwb6jlkgzmnhkfcfww3gci5p9g21wwg4z78n8xiq6r760byaz67"; depends=[]; }; - variables = derive2 { name="variables"; version="1.0-3"; sha256="1x4w6pqrl6lw5dalii7kiq5f7jbfj1mlwdq2f6bvyfpx8byrvkqc"; depends=[]; }; + variables = derive2 { name="variables"; version="1.1-0"; sha256="1ih132n3ci2l962xs853ra5g4f1amw8n91z37zk9108l8ajnp47z"; depends=[]; }; varian = derive2 { name="varian"; version="0.2.2"; sha256="0jyw46qx2w19h02mrwv3w3n8qc1n4b3ckm38qly1y4a4w9ib6c2i"; depends=[Formula ggplot2 gridExtra MASS rstan]; }; variantspark = derive2 { name="variantspark"; version="0.1.1"; sha256="13hkp6l64hi7xlll09gin7kdlkqrkn0lggrw8147zy9ivhknhk59"; depends=[sparklyr]; }; variosig = derive2 { name="variosig"; version="0.3-1"; sha256="09cxigii0sj78yqd18p4mm9jjqvd1k2cgjy43pxpmqdhia0q2pmv"; depends=[gstat sp testthat]; }; varitas = derive2 { name="varitas"; version="0.0.2"; sha256="16y0fcisdf4pypwqshy9c45v57axa25k8cpp1pr2ij95zycs3g1k"; depends=[assertthat doParallel dplyr foreach magrittr openxlsx stringr tidyr VennDiagram yaml]; }; varjmcm = derive2 { name="varjmcm"; version="0.1.1"; sha256="1xgy3n57pxhv6wrsw9h4dranxbw6hdpm1f9ra3kwlzrpz5c3289x"; depends=[expm jmcm MASS Matrix]; }; - varrank = derive2 { name="varrank"; version="0.3"; sha256="0k7hz61ymxf7w2hh1v2yfb6qdjn68a8ckjfiw0jqqhjx4wh5crn7"; depends=[FNN]; }; + varrank = derive2 { name="varrank"; version="0.4"; sha256="03zyv1cgrdnj7gzrp1ag0sqpxikrlsj3gg4x78gp1wxqwzq7aizx"; depends=[FNN]; }; vars = derive2 { name="vars"; version="1.5-3"; sha256="0zc6v827ll19n088n31afgjf65zqwvyzmmj4q3ab1xhqzxfsgbw6"; depends=[lmtest MASS sandwich strucchange urca]; }; varsExplore = derive2 { name="varsExplore"; version="0.3.0"; sha256="0d18wqq7fbs5ljdphsdgqmv8ab0wrzzykjhf4lqksi7n78s1fa2r"; depends=[dplyr DT glue magrittr purrr rio rstudioapi stringr tidyr]; }; - varycoef = derive2 { name="varycoef"; version="0.2.12"; sha256="16wadla399zjbl8khvvwm60mrg6b0wixlmq6hanvyvaarw4zwa8d"; depends=[optimParallel RandomFields sp spam]; }; + varycoef = derive2 { name="varycoef"; version="0.3.0"; sha256="0x56420535yprh3jsphy96m8jd4dwv88g3g2v3x30hjqnlkk2hvm"; depends=[DiceKriging glmnet lhs mlr mlrMBO optimParallel ParamHelpers pbapply RandomFields smoof sp spam]; }; vasicek = derive2 { name="vasicek"; version="0.0.3"; sha256="04g5dfn8zlm8n8sxmdq9xgkf0qbvvznqx27nyan268s5wlnnabd6"; depends=[mvtnorm]; }; vaultr = derive2 { name="vaultr"; version="1.0.2"; sha256="1b7g0jplp5dw1img7d6wm75gaycb3z8a8mzc6s0iwvhbfl8vf574"; depends=[getPass httr jsonlite R6]; }; vbdm = derive2 { name="vbdm"; version="0.0.4"; sha256="1rbff0whhbfcf6q5wpr3ws1n4n2kcr79yifcni12vxg69a3v6dd3"; depends=[]; }; vbsr = derive2 { name="vbsr"; version="0.0.5"; sha256="1avskbxxyinjjdga4rnghcfvd4sypv4m39ysfaij5avvmi89bx3b"; depends=[]; }; + vccp = derive2 { name="vccp"; version="0.1.0"; sha256="1c56csi59w60kmiv17vy6wlbygwbs9y3j17n204cp693ixmgqs4q"; depends=[mosum mvtnorm VineCopula]; }; vcd = derive2 { name="vcd"; version="1.4-8"; sha256="030yyhpzsj4ivwrla7p9kgvmyjh6b8fr7czf678ykxjj64ccnvr3"; depends=[colorspace lmtest MASS]; }; - vcdExtra = derive2 { name="vcdExtra"; version="0.7-1"; sha256="163x9hhvhgdmrqbcig7b120lk63svy0y652scbrcb11f85zrgb0c"; depends=[ca gnm MASS vcd]; }; + vcdExtra = derive2 { name="vcdExtra"; version="0.7-5"; sha256="0f822xmgw4iyzyz2p9bwiklj9b6faa2wy632p2895h1grgvnnxmd"; depends=[ca gnm MASS vcd]; }; vcfR = derive2 { name="vcfR"; version="1.12.0"; sha256="0lhxb3ac4fafwik9q3cds46svzf0hyca8k54chw3dpk50c0zz1yx"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tibble vegan viridisLite]; }; vcov = derive2 { name="vcov"; version="0.0.1"; sha256="1w89mr8dk6436bxap28rszajgm9k7sjfqsr1i4p68dlhw8zk4yq1"; depends=[]; }; vcpen = derive2 { name="vcpen"; version="1.8"; sha256="0ccbk9mki8lsxc6y327rg3yg0fbhlx44xkcv8jaxahhsg4dp8krd"; depends=[knitr Rcpp RcppArmadillo]; }; vcr = derive2 { name="vcr"; version="0.6.0"; sha256="0gp9wxi8zmwixiq8agzhba3abmb7a8zyy2plpavn34pp6cnka0f7"; depends=[base64enc cpp11 crul httr R6 urltools webmockr yaml]; }; - vctrs = derive2 { name="vctrs"; version="0.3.6"; sha256="09ddxgzyah7lw42hn6n8fynsixf43s10jamsf94d2aidky63czfz"; depends=[digest ellipsis glue rlang]; }; + vcrpart = derive2 { name="vcrpart"; version="1.0-4"; sha256="1mg87jpdih33lalxhfcxbri439d4cgi7hqdrnvijr7qabjmnc7p4"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; + vctrs = derive2 { name="vctrs"; version="0.3.8"; sha256="1c8v5lmap6iq4jpi7p3w05hsv2dq7rjg057pvnfyc5d1xmsqnkkz"; depends=[ellipsis glue rlang]; }; vcvComp = derive2 { name="vcvComp"; version="1.0.2"; sha256="0mip0v8gv358aadc3b4913dcz27kscx3dv15nwns20pan5jvyhv2"; depends=[]; }; vdar = derive2 { name="vdar"; version="0.1.3"; sha256="1nji97rcxp4v8pypx3z1265v85rb0yhw47i9cvacqmfxwk3hgpxj"; depends=[compositions]; }; vdg = derive2 { name="vdg"; version="1.2.1"; sha256="1jxqwg7k8ibzzdx8axhn2dx27j60qj0dlmczbfalll841ggigb45"; depends=[ggplot2 gridExtra proxy quantreg]; }; vdiffr = derive2 { name="vdiffr"; version="0.3.3"; sha256="0i0xdr8dakbkkgrhp0zvlnv3rxhc8h5naqq416mr5zv9q8i4p8jc"; depends=[BH devtools diffobj fontquiver freetypeharfbuzz gdtools glue htmltools htmlwidgets purrr R6 Rcpp rlang shiny testthat usethis xml2]; }; vec2dtransf = derive2 { name="vec2dtransf"; version="1.1"; sha256="029xynay9f9rn0syphh2rhd3szv50ib4r0h0xfhhvbbb37h5dc9s"; depends=[sp]; }; veccompare = derive2 { name="veccompare"; version="0.1.0"; sha256="03nyyxvhhwfxxg5w6qflk7q234ipbhj9fd4abcp50sxz3diabch1"; depends=[corrplot gtools pander purrr qgraph reshape2 VennDiagram]; }; - vecsets = derive2 { name="vecsets"; version="1.2.1"; sha256="086af6swjpbkd140yvb76affy5gn4p9xm41m3akm8axc3qk0hybg"; depends=[]; }; + vecsets = derive2 { name="vecsets"; version="1.3"; sha256="1pc68v0vrn1fxh7x8cb45m0xfb0228naz4i1cnizbvll6almh5hr"; depends=[pracma]; }; vectools = derive2 { name="vectools"; version="0.2.0"; sha256="005cgndfdzaglr02avmn2cgf3zrwxfkb280di738icriihn1nvg2"; depends=[]; }; + vectorwavelet = derive2 { name="vectorwavelet"; version="0.1.0"; sha256="1z0gl28hgrqgx0ynv248a80fh190pm15c9cg1l1665acrw62kqs7"; depends=[biwavelet fields foreach iterators maps Rcpp spam]; }; vegalite = derive2 { name="vegalite"; version="0.6.1"; sha256="0dlzhvrg3nj6knyycdgg3d1vzq3dn9vxb34fjin9hzilszqmarbk"; depends=[base64 clipr digest htmltools htmlwidgets jsonlite magrittr webshot]; }; vegan = derive2 { name="vegan"; version="2.5-7"; sha256="0aj6m9l1vkh32sar6fyvq4p8j4h2f2f347w1300qnzgaa5lmhfz6"; depends=[cluster lattice MASS mgcv permute]; }; vegan3d = derive2 { name="vegan3d"; version="1.1-2"; sha256="01yyhrapdvs6rr5hw1ij4jnpz7mq005s35pn96snpy8ngn6ir386"; depends=[cluster rgl scatterplot3d vegan]; }; - vegawidget = derive2 { name="vegawidget"; version="0.3.1"; sha256="154k5n3vg1fdjx6mbrlxvi9h17h651aqwr12wiknwmw0ikhcrnh0"; depends=[assertthat glue htmltools htmlwidgets jsonlite magrittr rlang]; }; + vegawidget = derive2 { name="vegawidget"; version="0.3.2"; sha256="0qrwzavfghiv6kqs5amsj1w7gn94igg8x2hkl0hzb5m8hd9mlgin"; depends=[assertthat digest glue htmltools htmlwidgets jsonlite magrittr rlang]; }; vegclust = derive2 { name="vegclust"; version="1.7.7"; sha256="0f81jw429ib601lvbzi4q23kb5n6lvavlgw56wfqdmvvkl68vwlc"; depends=[circular Kendall MASS Rcpp sp vegan]; }; vegdata = derive2 { name="vegdata"; version="0.9.8"; sha256="05sgmas7hlhxx2j95b4r5y2m6hhxa2cswy80bhs8lmjmy3yqyig6"; depends=[foreign plyr xml2]; }; - vegetarian = derive2 { name="vegetarian"; version="1.2"; sha256="15ys1m8p3067dfsjwz6ds837n6rqd19my23yj8vw78xli3qmn445"; depends=[]; }; - vegperiod = derive2 { name="vegperiod"; version="0.3.0"; sha256="06s53k99f6by39bi1lvi0y5jqbf5b364rri102d3qnzd2mq81ahs"; depends=[]; }; + vegperiod = derive2 { name="vegperiod"; version="0.3.1"; sha256="178zp7hw7bicygzl4ql0a9llkmrk4kyszcvvl430pvsc5y6srg75"; depends=[]; }; vegtable = derive2 { name="vegtable"; version="0.1.6"; sha256="04bil2v9krylnak9vbl4fahv75ca695a4sb4y82f99qlylzbdqm0"; depends=[foreign plotKML qdapRegex sp stringi taxlist vegdata]; }; - vein = derive2 { name="vein"; version="0.9.0.1"; sha256="1al4bj6n7kramrvzyylqpz2xg93lanvkjv4cya4zqaq7f6v8w65w"; depends=[data_table sf units]; }; + vein = derive2 { name="vein"; version="0.9.1.2"; sha256="0nzdlbs1lmzjc5hqq92nkwqq049amxf5pvwcyiqa8wh86351wzyi"; depends=[data_table dotCall64 sf units]; }; velociraptr = derive2 { name="velociraptr"; version="1.1.0"; sha256="0a67vmv05cxc9f27aqzr6nkgy2mj3fhykwj5nb23qwfqa669a5hi"; depends=[sf]; }; vembedr = derive2 { name="vembedr"; version="0.1.4"; sha256="1dgzl67z0mjvd4l53zvqmcqfim6g7nrfmbh709a30f3nghkx059k"; depends=[assertthat glue htmltools httr magrittr rlang stringr]; }; - venn = derive2 { name="venn"; version="1.9"; sha256="0d2vwjc932q8n9hww8krj7nixg1dfkmcw1k1cry2d0xdvbbnrj8r"; depends=[admisc]; }; + venn = derive2 { name="venn"; version="1.10"; sha256="1r31z6s384mcrjqxm9818mvc7v23ir26wcix5lc831fwihajlhk5"; depends=[admisc]; }; vennLasso = derive2 { name="vennLasso"; version="0.1.6"; sha256="0maydvx0qhdn5alqzqxjn485y9hw9qdr1xvgkmgwnjq59vni6d31"; depends=[foreach igraph MASS Matrix Rcpp RcppEigen RcppNumerical survival VennDiagram visNetwork]; }; venneuler = derive2 { name="venneuler"; version="1.1-0"; sha256="10fviqv9vr7zkmqm6iy2l9bjxglf2ljb7sx423vi4s9vffcxjp17"; depends=[rJava]; }; vennplot = derive2 { name="vennplot"; version="1.0"; sha256="0x59awa1zsjwk5qb1jzv6d2mn2fm4aq1lq8zlbnf1da0h4837yab"; depends=[Rcpp rgl stringr]; }; + verhoeff = derive2 { name="verhoeff"; version="0.4.0"; sha256="0kpxpl5s5342ajg22cwb7y9ks240drp37q1g67n19krdy6ih14kz"; depends=[]; }; verification = derive2 { name="verification"; version="1.42"; sha256="0pdqvg7cm9gam49lhc2xy42w788hh2zd06apydc95q2gj95xnaiw"; depends=[boot CircStats dtw fields MASS]; }; versions = derive2 { name="versions"; version="0.3"; sha256="0zm49j785dgv7fyr1yl9q5f0dsk8hhpim5q5bpkgrkzv7pwjribd"; depends=[]; }; vertexenum = derive2 { name="vertexenum"; version="1.0.2"; sha256="16ywz3z1kzhb3knhhi2i5igm3djdaaxyyrw69wkc5saa7ayhdb4y"; depends=[numbers]; }; vesselr = derive2 { name="vesselr"; version="0.2.1"; sha256="1wzprnpiv04gxhqgki36gp1a0xj9l3mchllphwkfsdja4axq3prk"; depends=[oro_nifti pbapply pbmcapply]; }; vetools = derive2 { name="vetools"; version="1.3-28"; sha256="1470xgqdq9n5kj86gdfds15k3vqidk3h99zi3g76hhyfl8gyl1c0"; depends=[lubridate maptools plyr scales sp stringr tis xts]; }; - vetr = derive2 { name="vetr"; version="0.2.12"; sha256="11xd8p945brj32lscfamvhc926rdx2jg9n2v5y4n0wdls8m3ljdl"; depends=[]; }; + vetr = derive2 { name="vetr"; version="0.2.13"; sha256="0wbhi5wzwvvp645dg8na8mh1yxvvfzwdm34xqrqkzh6cvlvlby4c"; depends=[]; }; vfcp = derive2 { name="vfcp"; version="1.4.0"; sha256="0zj1ihqdx5x1695al1xyi8k001yw8x7gdss72myxlnh7b4flnp9m"; depends=[copula extraDistr stringr]; }; vfinputs = derive2 { name="vfinputs"; version="0.1.0"; sha256="10fh6ybsqy9xm7gwl0kska0pgk810sgq9kvf86gmnm0pmrcqzsdh"; depends=[htmltools jsonlite scales shiny]; }; vfprogression = derive2 { name="vfprogression"; version="0.7.1"; sha256="0kgw1jx0rl9v8qy8qg7zjzdgvwqdi7k1lsvsx3lnpw4sfpkzsq23"; depends=[]; }; @@ -16445,75 +17104,81 @@ in with self; { viafr = derive2 { name="viafr"; version="0.2.0"; sha256="08hvylrv4c8p5vazalagbkv3vhqmr9halbxkf05kfn74ssw8lljz"; depends=[assertthat crul dplyr jsonlite magrittr purrr rlang stringr tibble tidyr utf8]; }; vici = derive2 { name="vici"; version="0.5.2"; sha256="0qad8ab04ndd29kcmd388piiymablfc7xlv6iml4sxkid7z5kgby"; depends=[cowplot DT ggplot2 ggpubr nlme shiny tidyr]; }; vietnamcode = derive2 { name="vietnamcode"; version="0.1.1"; sha256="0vc0c1fg30afar2dkch5h27b8jbglcd9ja6d5hcypnibqz4c68vz"; depends=[]; }; - viewshed3d = derive2 { name="viewshed3d"; version="3.2.0"; sha256="1qs597wivvzkdlls9r2hm6rprm3ssvk81my2nj7acczdh07fxmsv"; depends=[data_table lidR nabor pracma raster rgl sp viridis]; }; - vimp = derive2 { name="vimp"; version="2.1.0"; sha256="16dhvr1vcm5yca8rsscivdnk9yv9nhhfi1nbkal4gf3dy46anzb5"; depends=[dplyr magrittr MASS rlang ROCR SuperLearner tibble]; }; + viewshed3d = derive2 { name="viewshed3d"; version="4.0.0"; sha256="039xx39w3k3hckf0qci7j1364s47vja5s18siqjh6c5yy1w8q737"; depends=[data_table hyper_fit lidR nabor pkgcond plotrix pracma raster rgl sp viridis]; }; + vimp = derive2 { name="vimp"; version="2.1.9"; sha256="1vx74h8niqdyi5gpilpa0b04ph8b9phrf1hc8199ykrp7fxqvmha"; depends=[dplyr magrittr MASS rlang ROCR SuperLearner tibble]; }; + vimpclust = derive2 { name="vimpclust"; version="0.1.0"; sha256="0ly7piz7q88sh2g7zq5b2pqph9467b4fclgq9amm0m7xc8vrv4f9"; depends=[ggplot2 mclust PCAmixdata Polychrome rlang]; }; vindecodr = derive2 { name="vindecodr"; version="0.1.1"; sha256="0yvchdf90l8lkzyba5wrpma6vjcgf19li159s8s79y8sgp5pyx7p"; depends=[httr]; }; - vinereg = derive2 { name="vinereg"; version="0.7.2"; sha256="00w4j20rcwvkvpnhqjhwfqdnxij4zgmfrjj191hagdg51bmczgvd"; depends=[assertthat BH kde1d Rcpp RcppEigen RcppThread rvinecopulib wdm]; }; + vinereg = derive2 { name="vinereg"; version="0.7.3"; sha256="0a87sbml9k7nhaiaj90i52aw9n3kdfkf53dwzb12dmz521bavs63"; depends=[assertthat BH kde1d Rcpp RcppEigen RcppThread rvinecopulib wdm]; }; vines = derive2 { name="vines"; version="1.1.5"; sha256="057d2fdh03cq9kh4vz94arqscahmz14xbr2g59l0vn205lnyilf1"; depends=[ADGofTest copula cubature TSP]; }; - violinmplot = derive2 { name="violinmplot"; version="0.2.1"; sha256="1j3hb03y988xa704kp25v1z1pmpxw5k1502zfqjaf8cy4lr3kzsc"; depends=[lattice]; }; - violinplotter = derive2 { name="violinplotter"; version="1.0.1"; sha256="16kcz99w9avx99y5cnc5rn3dx367v1fmc8mlavjvfp8sy7m9x3lp"; depends=[]; }; - vioplot = derive2 { name="vioplot"; version="0.3.5"; sha256="0aiy615kn9lpr2cs757g3pklg81n01yhqh0wrwv111fn3cy86r0v"; depends=[sm zoo]; }; + violinplotter = derive2 { name="violinplotter"; version="2.0.1"; sha256="0kin6b7alykxging8kh443mgn665sd9hqfpr2dq2c91pyvdpvdkj"; depends=[]; }; + vioplot = derive2 { name="vioplot"; version="0.3.6"; sha256="15vmrm9gwdhfg8mnq8rsg7m59kzc9h53cv96am4ds1dkm56w4n6p"; depends=[sm zoo]; }; viopoints = derive2 { name="viopoints"; version="0.2-1"; sha256="0cpbkkzm1rxch8gnvlmmzy8g521f5ang3nhlcnin419gha0w6avf"; depends=[]; }; vip = derive2 { name="vip"; version="0.3.2"; sha256="1qsvyfms79sn46jdmq7q5r0d6gwjqhr9pll1y776rx0bj7vx1ax5"; depends=[ggplot2 gridExtra magrittr plyr tibble]; }; vipor = derive2 { name="vipor"; version="0.4.5"; sha256="112gc0d7f8iavgf56pnzfxb7hy75yhd0zlyjzshdcfbnqcd2a6bx"; depends=[]; }; - viridis = derive2 { name="viridis"; version="0.5.1"; sha256="060rf1jn29dq53y3nhb0hykvcap6rqsk04rq544ypiiqb18ngwnx"; depends=[ggplot2 gridExtra viridisLite]; }; - viridisLite = derive2 { name="viridisLite"; version="0.3.0"; sha256="1by2l05f0yabwvv64lhnv7bbhx0w683s3wr9j2xda920ghpa23kq"; depends=[]; }; - viromeBrowser = derive2 { name="viromeBrowser"; version="1.0.0"; sha256="0adyf6ssi0ph7x880inj1vfmpjfbsaavjavjnrpr9cb6p0qdmvyc"; depends=[Biostrings data_table DT ggplot2 markdown plyr rbokeh reshape Rsamtools shiny shinycssloaders shinydashboard shinyWidgets stringr]; }; + viridis = derive2 { name="viridis"; version="0.6.0"; sha256="1vr5s86h39r86pfxyh3pylpwhf2chdy047ny63v04f576w4hxarp"; depends=[ggplot2 gridExtra viridisLite]; }; + viridisLite = derive2 { name="viridisLite"; version="0.4.0"; sha256="0siwr0vq80gs3sbyd542zjb0cl9av5zqdm0fqnym5g6ribf5b6c4"; depends=[]; }; + viromeBrowser = derive2 { name="viromeBrowser"; version="1.1.0"; sha256="1dryyy2x3msarxq9ifrwkr5l0i3dq7b9zcyi91hnwpfnik3j1zz5"; depends=[Biostrings data_table DT ggplot2 markdown rbokeh Rsamtools shiny shinycssloaders shinydashboard shinyWidgets stringr]; }; virtualNicheR = derive2 { name="virtualNicheR"; version="1.0"; sha256="1ya1nd30vm7kjc4468ra8fjyxdwq2i1l1lmajhqjvw0nsj0mh1bl"; depends=[devtools diptest]; }; virtualPollen = derive2 { name="virtualPollen"; version="1.0.0"; sha256="16q1smwh3ryids3pa7lb4i4pxmjjyl449w6fikkrm9ybj1k8gfcf"; depends=[cowplot ggplot2 mgcv plyr tidyr viridis]; }; virtualspecies = derive2 { name="virtualspecies"; version="1.5.1"; sha256="0l86awcjq6i1lqax596xy5qfmzwiz3cwp2rczvgg37fdrym97cm3"; depends=[ade4 raster rworldmap sp]; }; - virtuoso = derive2 { name="virtuoso"; version="0.1.5"; sha256="188z5n4sxpda4slszvzmf62jc60bx3viyrqafii2fg02hqavgfpr"; depends=[curl DBI digest fs ini odbc processx ps rappdirs]; }; + virtuoso = derive2 { name="virtuoso"; version="0.1.6"; sha256="04lpypp9bbawnwmavw7xl0q448rava0bd95jwd10ywnbj5w2nkw6"; depends=[curl DBI digest fs ini odbc processx ps rappdirs]; }; virustotal = derive2 { name="virustotal"; version="0.2.1"; sha256="0lky75al8zcvmfgx7a2s3bij8ya4avdsnv046lk7564zfd8rbymw"; depends=[httr plyr]; }; visNetwork = derive2 { name="visNetwork"; version="2.0.9"; sha256="0854r9znpjd9iy6j5bgrn20vj13dhp606gs3b6iy0rhym71ks2sy"; depends=[htmltools htmlwidgets jsonlite magrittr]; }; + visStatistics = derive2 { name="visStatistics"; version="0.1.1"; sha256="0lp6sf2wrjjp1zh77yhlgr9sfpls54z0bny0l36v98ik4qykky0f"; depends=[Cairo multcompView nortest vcd]; }; visTree = derive2 { name="visTree"; version="0.8.1"; sha256="1l07zfr2hagjpdxfw5290wa3ki4bl7iqxrrhda0d1bp3wmwfz0ai"; depends=[colorspace partykit rpart]; }; + visa = derive2 { name="visa"; version="0.1.0"; sha256="1mx7nbbpxs4fdp781a75qvffa42dx2n6anslbfs9bnprmvzmljqr"; depends=[ggplot2 ggpmisc Matrix RColorBrewer reshape2]; }; + visae = derive2 { name="visae"; version="0.1.0"; sha256="06qrb7q5qwcmmp258psfxzxhmxy2j53gcz09gngspv0fwh92h7z8"; depends=[ca dplyr DT ggplot2 ggrepel magrittr rlang shiny shinyjs tidyr]; }; viscomplexr = derive2 { name="viscomplexr"; version="1.1.0"; sha256="0r1lhvpbckcbfj60i7l4kflvhxdbimkany7y1ranj4h2pl79vx9x"; depends=[doParallel foreach plotrix Rcpp Rdpack scales]; }; visdat = derive2 { name="visdat"; version="0.5.3"; sha256="1ikqp29nncbw1xlwyb9dqqgcdk9q0bs3wxhnhnjpb11vcjv7cz2j"; depends=[dplyr ggplot2 glue magrittr purrr readr tibble tidyr]; }; visit = derive2 { name="visit"; version="2.1"; sha256="0kkspih7m18g5pqlwrxpgjdwqxpp23c3xyvcnvv247abl9aq81rd"; depends=[BH Rcpp RcppEigen rstan sqldf StanHeaders]; }; visreg = derive2 { name="visreg"; version="2.7.0"; sha256="070yhyxxh3w16i54k790n47bgcjn4b10b6g1z553x6afjc3l3a6d"; depends=[lattice]; }; - vistime = derive2 { name="vistime"; version="1.1.0"; sha256="10jjszdl3wqw7hmsrbdqj2pvn2jjczla8i8985j8aw346nrrzpaw"; depends=[assertthat ggplot2 ggrepel highcharter plotly RColorBrewer]; }; + vistime = derive2 { name="vistime"; version="1.2.1"; sha256="0fdjbzdwsy6fby6rf8l940qwdkbs43is0jy7xkf6gg6vlgc9jgni"; depends=[assertive_types ggplot2 ggrepel plotly RColorBrewer rlang]; }; vistributions = derive2 { name="vistributions"; version="0.1.1"; sha256="1s68dpcy55v6yw7ivh2xpshz6qc0qaifjd15h7rjg3zl1cx81mh3"; depends=[ggplot2 magrittr shiny]; }; - visualFields = derive2 { name="visualFields"; version="0.6"; sha256="1w6wkyzjakj6ss9nv4gzkgva4m21jbsz10c2jy660bjb25rf59ih"; depends=[deldir flip gtools Hmisc matrixStats spatstat]; }; + visualFields = derive2 { name="visualFields"; version="0.6.1"; sha256="1n4y3py4ciq4pbxjv4545fq45pgcba5bh6alrv959na4gs551rxm"; depends=[deldir flip gtools Hmisc matrixStats spatstat_geom]; }; visualize = derive2 { name="visualize"; version="4.4.0"; sha256="1k3jpvj1yysxc4g1a1w3m1y91104aqxqv8jh9qdd23gwy7a29525"; depends=[]; }; visualpred = derive2 { name="visualpred"; version="0.1.0"; sha256="19jq9h9kiv4vbzqz8zrv5gqb1bprq5jy7mcxvdwpfnna2rja6q4z"; depends=[data_table dplyr e1071 FactoMineR gbm ggplot2 ggrepel magrittr MASS MBA mltools nnet pROC randomForest]; }; - visvow = derive2 { name="visvow"; version="1.1.0"; sha256="1xrwa009v1chzp338jbcyf9bdlf3s1i829qj8zpshybwl0xz6gj1"; depends=[Cairo DT formattable ggdendro ggplot2 ggrepel MASS PBSmapping plot3D plyr pracma psych Rdpack readxl Rtsne shiny shinyBS splitstackshape svglite tidyr WriteXLS]; }; + visvow = derive2 { name="visvow"; version="1.2.0"; sha256="0xk220m5m78xgpa5rr08dn3ijn3aqh3g5wrnfni2lm3r6wqrx9zl"; depends=[Cairo DT formattable ggdendro ggplot2 ggrepel MASS PBSmapping plot3D plyr pracma psych Rdpack readxl Rtsne shiny shinyBS shinybusy splitstackshape svglite tidyr tikzDevice WriteXLS]; }; vita = derive2 { name="vita"; version="1.0.0"; sha256="114p2lzcr8rn68f0z4kmjdnragqlmi18axda9ma4sbqh8mrmjs9v"; depends=[randomForest Rcpp]; }; - vitae = derive2 { name="vitae"; version="0.3.0"; sha256="0z5frvhsf7mgj3pr25jk4w0jnlgry06359ammikdq20lwmcjvx5n"; depends=[dplyr glue knitr pillar rlang rmarkdown tibble vctrs xfun yaml]; }; + vitae = derive2 { name="vitae"; version="0.4.2"; sha256="1pxd612qq0jzp29qcykb4c1s9mljpmq6xfvhmyx8r9nv8j816qkv"; depends=[dplyr glue knitr pillar rlang rmarkdown tibble vctrs xfun yaml]; }; vitality = derive2 { name="vitality"; version="1.3"; sha256="17micfmlksnw167vavvhlk431fm20k74y5ggs47pgz5fwpm854zp"; depends=[]; }; + vivid = derive2 { name="vivid"; version="0.1.0"; sha256="1a50p5vc009iicn1g0ij4pclq33ws49cjfpicvcg19hz7pz65i02"; depends=[colorspace condvis2 DendSer dplyr flashlight GGally ggalt ggnewscale ggplot2 igraph RColorBrewer tidyr]; }; vivo = derive2 { name="vivo"; version="0.2.1"; sha256="1cfval06byviw7himr5nql34h4jaway9gb6dzya3v994p7v851cg"; depends=[DALEX ggplot2]; }; - vizdraws = derive2 { name="vizdraws"; version="1.0.0"; sha256="0d97xmpz06h1g3rmnpamwnisyi5jrxa35r19i9z0glqxhla9l2d2"; depends=[dplyr glue htmlwidgets magrittr stringr tidyr]; }; + vizdraws = derive2 { name="vizdraws"; version="1.1"; sha256="19lr55swfnl79pdkybgfbkm0pvx60x64rlya0wkhdijbizyr1jvb"; depends=[dplyr glue htmlwidgets magrittr stringr tidyr]; }; vkR = derive2 { name="vkR"; version="0.2"; sha256="1pk444fcw4yyv2dnfrw9vynbpc4gwr5yv9jd41djp9yipdf6d53l"; depends=[httr jsonlite purrr XML]; }; - vlad = derive2 { name="vlad"; version="0.2.1"; sha256="0rm8fasmrrk380v6mqn85gpsg4wml43qdlizq7lpnhs4qb50sr7f"; depends=[BH checkmate dplyr magrittr Rcpp RcppArmadillo tidyr]; }; + vlad = derive2 { name="vlad"; version="0.2.2"; sha256="0c3zfjm5nj7iisfnl822sk8wdszv6hcsaf51sn7aqnlp579hq2jk"; depends=[BH checkmate dplyr magrittr Rcpp RcppArmadillo tidyr]; }; vlda = derive2 { name="vlda"; version="1.1.5"; sha256="17xn8qqh043dm05ib3h4l1qx07wxncf5d06x9l1wl6jbkvnsm2nq"; depends=[dplyr ggiraph ggplot2 ggrepel ggsci]; }; vmd = derive2 { name="vmd"; version="0.1.0"; sha256="17c06a9l6i90ivpvf3rgv6yrsqv36qmywmmy92y5b81zqhgmh907"; depends=[ggplot2 magrittr R6 Rcpp reshape2 scales]; }; + vmr = derive2 { name="vmr"; version="0.0.3"; sha256="1qxcbmf71xwlmi5wyjs3a86ywjd0cj6f86kyq5bpw4ykn797kciw"; depends=[curl jsonlite]; }; vmsbase = derive2 { name="vmsbase"; version="2.2.1"; sha256="1xxn0vm9r8kiix6whlc12r0wanf6acrl9a86h44nwm019xfmlfyp"; depends=[AMORE cairoDevice chron cluster DBI ecodist fields foreign ggmap ggplot2 gmt gsubfn gWidgets2 gWidgets2RGtk2 intervals mapdata maps maptools marmap outliers PBSmapping plotrix R6 RSQLite sp sqldf VennDiagram]; }; vocaldia = derive2 { name="vocaldia"; version="0.8.3"; sha256="1r28f2bwkkxjjv3qysdvp5v9gjrd4rz8l1zqd80qjnj552viy86z"; depends=[]; }; - volcano3D = derive2 { name="volcano3D"; version="1.0.1"; sha256="1mk7fi72qp07wxffqkgn87r4ws3b3cy9xv52yds30q9h796l4f82"; depends=[ggplot2 ggpubr ggrepel plotly]; }; + volcano3D = derive2 { name="volcano3D"; version="1.2.0"; sha256="10wfvqz7jf92rzhg8ys55mgv31rn2b85lji813jg2wm4k94g95cm"; depends=[ggplot2 ggpubr ggrepel plotly]; }; volesti = derive2 { name="volesti"; version="1.1.2"; sha256="1g8vi0yal1rd0swmjaalnnm0syjdw75p6bsa8n4j957zqa055pgc"; depends=[BH Rcpp RcppEigen]; }; volleystat = derive2 { name="volleystat"; version="0.2.0"; sha256="0n1r0bvvmba21cs3qgpnw9jxpgl2n82fhxa40sa1w2gav5rch5i6"; depends=[]; }; voronoiTreemap = derive2 { name="voronoiTreemap"; version="0.2.0"; sha256="1wvnqdrvba4ss4f3k8gzb720irdq2brv2aaq16ywifv8fnjf02r3"; depends=[data_tree DT htmlwidgets rlang shiny shinyjs]; }; vortexR = derive2 { name="vortexR"; version="1.1.7"; sha256="06i2rqbc3h2kv8jjrdlrg03xrzb3yiyzpnv2rvlkjcnn46f84bgf"; depends=[betareg data_table GGally ggplot2 glmulti gtools irr plyr R_utils stringr vortexRdata]; }; vortexRdata = derive2 { name="vortexRdata"; version="1.0.5"; sha256="0b47q3aslz4110a1bfaa103i098y2ngzrjh01rwasq3gd6xbif9n"; depends=[]; }; vosonSML = derive2 { name="vosonSML"; version="0.29.13"; sha256="0xajffifapn0sfnp39p8iv6hdxindzi7vywcwhla9h2hmvraad6w"; depends=[data_table dplyr Hmisc httpuv httr igraph jsonlite lubridate magrittr purrr RCurl rlang rtweet stringr textutils tibble]; }; - vote = derive2 { name="vote"; version="2.0-2"; sha256="0b2v62whnqnkf7s9bjwa2yfvw7hqv5vgzls681vrjpcwh51hv6rc"; depends=[data_table fields formattable knitr]; }; + vote = derive2 { name="vote"; version="2.2-0"; sha256="00mfwqp08zx2lfwcjw4j0h2qnvd2vpj0lacc9ja3cdbzlx2shblh"; depends=[data_table fields formattable knitr]; }; voteogram = derive2 { name="voteogram"; version="0.3.1"; sha256="12xv0c3g4vr23c8adkk8z7m7sx31w5mjvdg9h4qbvaimb99p2r7z"; depends=[dplyr ggplot2 jsonlite scales]; }; + votesmart = derive2 { name="votesmart"; version="0.1.0"; sha256="19pp0lnvvii9ac8zr7x775j7a4lzfnjkaall47a3lsv98ql85cza"; depends=[dplyr gestalt glue httr jsonlite lubridate magrittr purrr snakecase stringr tidyr]; }; votesys = derive2 { name="votesys"; version="0.1.1"; sha256="1z7cx3rj3bfrkb6jkmf1m1wad5ff46zrab5vhk69wf3jbwd9h920"; depends=[data_table gtools Matrix]; }; vottrans = derive2 { name="vottrans"; version="1.0"; sha256="1fp7jrw072ws39bqsg88bm2qndcv68aa2vdqwgnza58p1dfq3x9f"; depends=[quadprog]; }; vov = derive2 { name="vov"; version="0.1.2"; sha256="0hbb9zj33a98rv4grm644k650pq6kgmm6l01mkd4p0ic0mxa9fyh"; depends=[glue htmltools shiny]; }; vowels = derive2 { name="vowels"; version="1.2-2"; sha256="0xhfn3avx9h6kg3jwd47n2x7w8q8c9h13wsxd74hhbbn2gkjrs84"; depends=[]; }; vows = derive2 { name="vows"; version="0.5"; sha256="06akjdbab9v7r47di7syvcm7gf4k81djizg8maszs5l1ksyhmv6b"; depends=[fda gamm4 mgcv oro_nifti RLRsim shape stringr]; }; voxel = derive2 { name="voxel"; version="1.3.5"; sha256="1xlym8xc22dq67h0lylrr16z7b4zdidpgrkvbs7n9fnkh6vijw2j"; depends=[gamm4 ggplot2 lmerTest mgcv oro_nifti purrr]; }; - vpc = derive2 { name="vpc"; version="1.2.1"; sha256="0w73p8i4yf3m9r13476w90303nr307dw2y78zq8ydrcqrhn2fm47"; depends=[classInt dplyr ggplot2 MASS readr stringr survival tidyr]; }; + vpc = derive2 { name="vpc"; version="1.2.2"; sha256="15s9f6hmqawv2594xqv58hnqg2wm1fm8qaj8h9k4m55cx4sf1hik"; depends=[classInt dplyr ggplot2 MASS readr stringr survival tidyr]; }; vprr = derive2 { name="vprr"; version="0.1.0"; sha256="0wxcaw6r56wd8sxr5xc10xbhg9cbfz82z4cn4x0w8qhrzwl4v0zl"; depends=[dplyr ggplot2 gridExtra gsw interp lubridate magick metR oce stringr tidyr usethis]; }; vrcp = derive2 { name="vrcp"; version="0.1.1"; sha256="1wrch1dqy752gkj24h1dgi2x3kf1797xj4pf1s9mszf3x3ic905d"; depends=[ggplot2]; }; vrmlgen = derive2 { name="vrmlgen"; version="1.4.9"; sha256="0lifhhf41yml4k83wpkssl14jgn8jaw1lcknwbci1sd8s1c4478l"; depends=[]; }; - vroom = derive2 { name="vroom"; version="1.3.2"; sha256="1w42mvpfpwxqjb3i697gcwyvaz99kw5953x4a6vjcdb5j4fjdlnw"; depends=[bit64 cpp11 crayon glue hms lifecycle progress rlang tibble tidyselect vctrs withr]; }; + vroom = derive2 { name="vroom"; version="1.4.0"; sha256="049i65x02zafb9fzscv672ygd47igvycgh2zzmv9ijai94idxnf7"; depends=[bit64 cpp11 crayon glue hms lifecycle progress rlang tibble tidyselect vctrs withr]; }; vrtest = derive2 { name="vrtest"; version="0.97"; sha256="00hdgb0r18nwv3qay97b09kqqw9xqsbya06rrjyddqh9r6ggx1y0"; depends=[]; }; vscc = derive2 { name="vscc"; version="0.2"; sha256="1p14v8vd8kckd44g4dvzh51gdkd8jvsc4bkd2i4csx8vjiwrni5w"; depends=[mclust teigen]; }; vsgoftest = derive2 { name="vsgoftest"; version="1.0-1"; sha256="0vypi4cf04bljmx3jwq3ixs86ivd6p7a825ik189y71fyqg9g70v"; depends=[fitdistrplus Rcpp]; }; vstsr = derive2 { name="vstsr"; version="1.0.0"; sha256="0flsw5yw1vmj5x866klxmjqz5aimkvjiwl1zdciz63p9zffmb4gz"; depends=[httr jsonlite magrittr R6 RCurl xml2]; }; - vtable = derive2 { name="vtable"; version="1.2.6"; sha256="18ak1j98kbjxp3sy3nmn7avary3cn39xy1nh2xzm3lmhc8i5n3vw"; depends=[haven kableExtra knitr rstudioapi sjlabelled]; }; + vtable = derive2 { name="vtable"; version="1.3.1"; sha256="0nn84qd1v94i58c80f0nyigmp8xziz05ffipr2bhg4a5b93spvyd"; depends=[haven kableExtra knitr rstudioapi sjlabelled]; }; vtreat = derive2 { name="vtreat"; version="1.6.2"; sha256="0vxwkrfbxfbqpjla96ksi9r96r4h381smh2w2jpp3hkdrw1j0k05"; depends=[digest wrapr]; }; - vtree = derive2 { name="vtree"; version="5.0.0"; sha256="1sflc9zk6rllxrirdmzj5nlkmf8gax1fvnhqaggpjd3pyhhvi3y0"; depends=[DiagrammeR DiagrammeRsvg htmlwidgets rsvg shiny]; }; + vtree = derive2 { name="vtree"; version="5.1.9"; sha256="118r43gfz2h8fxvzl00w4456l7wyhzxc1jczdpbdvcdipmyyg55q"; depends=[DiagrammeR DiagrammeRsvg htmlwidgets rsvg shiny]; }; vudc = derive2 { name="vudc"; version="1.1"; sha256="0zxz6n3ixa3xjzcinky8ymqjx9w8y8z65mz8d84dl00mxzkmkz4h"; depends=[]; }; vwline = derive2 { name="vwline"; version="0.2-2"; sha256="1hilr996xn5wh8kfyab55w2i1c02a8x909h4ahag5q6s7603qng5"; depends=[gridBezier polyclip]; }; vwr = derive2 { name="vwr"; version="0.3.0"; sha256="1h790vjcdfngs1siwldvqz8jrxpkajl3266lzadfnmchfan1x7xv"; depends=[lattice latticeExtra stringdist]; }; @@ -16528,22 +17193,23 @@ in with self; { wactor = derive2 { name="wactor"; version="0.0.1"; sha256="0dc7413jb3yz0nns2lc93w32wv6m4sg17j2ip63gc12vis0nf855"; depends=[ggplot2 Matrix R6 text2vec tibble tokenizers xgboost]; }; waffle = derive2 { name="waffle"; version="0.7.0"; sha256="1qjmai33p96cyavi9lgi6k30h6fj7db5sr569v9jf4kwx92c61df"; depends=[extrafont ggplot2 gridExtra gtable RColorBrewer]; }; wahc = derive2 { name="wahc"; version="1.0"; sha256="1324xhajgmxq6dxzpnkcvxdpm2m3g47drhyb2b3h227cn3aakxyg"; depends=[]; }; - waiter = derive2 { name="waiter"; version="0.1.3"; sha256="18xfdlrgayf587big0gphvmw9nkg856bsh6k5rdjagq2y7dfipr3"; depends=[crayon htmltools magrittr R6 rstudioapi shiny]; }; + waiter = derive2 { name="waiter"; version="0.2.0"; sha256="18mrzv0zf31805s6y86dc77m1404bsvdm0z2vcnqja5hsz8a18q7"; depends=[crayon htmltools magrittr R6 shiny]; }; wakefield = derive2 { name="wakefield"; version="0.3.6"; sha256="1rssh6v8m6fim2pvm4cjw8cbni77bv5qp0rwi6vwdl3jhi5zws7n"; depends=[chron dplyr ggplot2 stringi]; }; - wal = derive2 { name="wal"; version="0.0.1"; sha256="1qg80879kffqb821lgsd5mxg2irgnhbszyr8dq06y2xz5aqyhbk7"; depends=[freesurferformats imager jpeg png spacesXYZ]; }; - waldo = derive2 { name="waldo"; version="0.2.3"; sha256="0lsw8p4wiggqm9fvh5vgmf0ms0npcg3hcwyzlg5ahv5yx4pv5fhz"; depends=[cli diffobj fansi glue rematch2 rlang tibble]; }; - walker = derive2 { name="walker"; version="0.5.0"; sha256="1nclwll3w6vak5fx7izlxrac5i5wsbgrxlr2a2gfcv70q009hk9i"; depends=[bayesplot BH coda dplyr ggplot2 Hmisc KFAS Rcpp RcppArmadillo RcppEigen rlang rstan rstantools StanHeaders]; }; + wal = derive2 { name="wal"; version="0.1.0"; sha256="0n81c2i2wzmy33kk1k4zjjgv1irh8xqw05clif8n86qr4m0a01sv"; depends=[freesurferformats imager jpeg png spacesXYZ]; }; + waldo = derive2 { name="waldo"; version="0.2.5"; sha256="09jhwpgd6hg4qyip4r7wzpjz0jr139fyspd5ncriqimp522snqbr"; depends=[cli diffobj fansi glue rematch2 rlang tibble]; }; + walker = derive2 { name="walker"; version="1.0.2"; sha256="00hffm3x1j9d56qdad1ldfvkcnv4n6cs3f7rw4pda2qyqa1z20kz"; depends=[bayesplot BH coda dplyr ggplot2 Hmisc KFAS loo Rcpp RcppArmadillo RcppEigen rlang rstan rstantools StanHeaders]; }; walkscoreAPI = derive2 { name="walkscoreAPI"; version="1.2"; sha256="1c2gfkl5yl3mkviah8s8zjnqk6lnzma1yilxgfxckdh5wywi39fx"; depends=[]; }; wallace = derive2 { name="wallace"; version="1.0.6.3"; sha256="0qrgq1d7l75q5zz7chcdz379kpiqfh3jlqdw2pqdcs4vvpy5bnzc"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgbif rgdal rgeos rmarkdown shiny shinyjs shinythemes spocc spThin testthat XML zip]; }; wally = derive2 { name="wally"; version="1.0.10"; sha256="1d03vxn6q7v0nsrkd7dxkkv3siysgicv6c13fkvwmypln9vsl6sl"; depends=[data_table prodlim riskRegression]; }; walmartAPI = derive2 { name="walmartAPI"; version="0.1.5"; sha256="1nng8izncj2nmmpywn1ggpzvjh8q7y3q6260qhy9kbmvrrl26spf"; depends=[dplyr glue httr magrittr purrr stringr tibble]; }; walrus = derive2 { name="walrus"; version="1.0.3"; sha256="1nk2glcvy4hyksl5ipq2mz8jy4fss90hx6cq98m3w96kzjni6jjj"; depends=[ggplot2 jmvcore R6 WRS2]; }; wand = derive2 { name="wand"; version="0.5.0"; sha256="0y9xmh9a93lnadg83i223j2nf77jazz8m1ck1bmdf5jwj4vyzaqa"; depends=[]; }; - warbleR = derive2 { name="warbleR"; version="1.1.24"; sha256="1hrp9yd1ny5krkv1bfvzhw0jm6r6qy52mzf0vb72cb62bay6rgfp"; depends=[dtw fftw monitoR NatureSounds pbapply RCurl rjson seewave tuneR]; }; + warbleR = derive2 { name="warbleR"; version="1.1.26"; sha256="1im3ifh1dwj0w8zz0j6023z615qvybm7ycy25sp9ynh67p9yza7v"; depends=[bioacoustics crayon dtw fftw knitr monitoR NatureSounds pbapply Rcpp RCurl rjson seewave stringi tuneR]; }; warp = derive2 { name="warp"; version="0.2.0"; sha256="0s0acddc5h14245hi1faycxp0fyvw6nlgaz2df7da4fpyd2f638f"; depends=[]; }; warpMix = derive2 { name="warpMix"; version="0.1.0"; sha256="13zbl4aifhg7j5b3vpwgzgs09hr7yblz0rckmj5qh40s78j8cpfn"; depends=[fda fields lme4 MASS nlme reshape2]; }; washdata = derive2 { name="washdata"; version="0.1.3"; sha256="0m7rwwi189sbsv3144x14jqmfax30f6ri1pisy47yggmmjpdplps"; depends=[]; }; washeR = derive2 { name="washeR"; version="0.1.2"; sha256="0sb5sgwf7y9sd291qfj1az3x6h6gmznnnsdmqizkmv2xz9029rxz"; depends=[gplots]; }; + washex = derive2 { name="washex"; version="1.0.0"; sha256="0di55jhrrhdjgmg60z8bzrp4ypcxlchjysd7y3b6h6h97k327yd0"; depends=[dplyr purrr rlang XML]; }; waspr = derive2 { name="waspr"; version="1.0.0"; sha256="0rs7h9pjiqq7as5k7yrj3phn6lgdl7dzyirbmk2jjp7mw9iqhy9i"; depends=[BH Rcpp RcppArmadillo]; }; water = derive2 { name="water"; version="0.8"; sha256="0qglf922dlgi41jzz3sivq7ckmzl8axqjfg4klcgnddycmm3ha5j"; depends=[raster rgdal sp]; }; waterData = derive2 { name="waterData"; version="1.0.8"; sha256="0884agh876wf3qlbc75fbaa47x2iwvncz7r2l25qw34n8lxq1yr6"; depends=[dataRetrieval lattice latticeExtra lubridate xml2]; }; @@ -16559,10 +17225,11 @@ in with self; { wavelets = derive2 { name="wavelets"; version="0.3-0.2"; sha256="07706rsjdmzj46ib2kfm5lfk4bnm2wfw7rby0ixs6x0myyzxdl92"; depends=[]; }; wavemulcor = derive2 { name="wavemulcor"; version="3.1.0"; sha256="1f7idj8vjnssh6s2h4vji1jlpf55hp4zvv5wsi2c9w7iyxwlhs5n"; depends=[plot3D RColorBrewer waveslim]; }; waver = derive2 { name="waver"; version="0.2.1"; sha256="1kl14cd96fwrqvk35sqbgi8bf31gc2ccxxy5d1v46scwyqkb0g5l"; depends=[geosphere rgdal rgeos sp]; }; - waves = derive2 { name="waves"; version="0.1.0"; sha256="1piv4qyfsms2y8rz9q4fffwci2fvhzqz151pa1w6avd78rrjbj2b"; depends=[caret dplyr ggplot2 magrittr pls prospectr randomForest rlang spectacles stringr tidyr tidyselect wesanderson]; }; + waves = derive2 { name="waves"; version="0.1.1"; sha256="17rnhfpwi71s6g3ai3j14wbgq3askf30phs881kka1k24r6z64k8"; depends=[caret dplyr ggplot2 magrittr pls prospectr randomForest rlang spectacles stringr tidyr tidyselect wesanderson]; }; waveslim = derive2 { name="waveslim"; version="1.8.2"; sha256="0ibivnhz0l06sss5rrrcvyiwg3qpbyk3qn4vx4pp90kj09x4yg0k"; depends=[]; }; wavethresh = derive2 { name="wavethresh"; version="4.6.8"; sha256="1nz74bm7pgck1i9c28svxnic8wkwkm5dhc8bhrxiih5wxb36kcwk"; depends=[MASS]; }; wayback = derive2 { name="wayback"; version="0.2.4"; sha256="11h5bvalsdb3wwlybmplnd315y9jkb33pfhlc0231vhbcy9xkczz"; depends=[checkpoint]; }; + waydown = derive2 { name="waydown"; version="1.1.0"; sha256="1yjx9cd8h8rsi44s7dcqrvfmsbjhw7vkg2z7bl4knsgbki0c978g"; depends=[Matrix numDeriv]; }; wbs = derive2 { name="wbs"; version="1.4"; sha256="0ibrf30riavy6shaxgiznwh4gmnkx92260gsl0d74jkys98mlxdj"; depends=[]; }; wbsd = derive2 { name="wbsd"; version="1.0.0"; sha256="16jhimsq8symf6f2awczqkaqkdmlkzhmgk01iimhkvqlx8g2v219"; depends=[Rcpp RcppEigen]; }; wbstats = derive2 { name="wbstats"; version="1.0.4"; sha256="1va3lrksr5zg4k729xvbh176f8zcp9vfrvwxcp04znyh1rvmh6vz"; depends=[dplyr httr jsonlite lifecycle lubridate magrittr readr rlang stringr tibble tidyr]; }; @@ -16570,30 +17237,33 @@ in with self; { wcep = derive2 { name="wcep"; version="1.0.0"; sha256="1hpakygvh3b64i5hwkriwq5g8vnvghvgdj0jn9m59j43050k32cy"; depends=[coin dplyr progress tidyr]; }; wdm = derive2 { name="wdm"; version="0.2.2"; sha256="1pidlfp67x3wnmkp0qgna4vz29qx09xsy7gfbqzrjqkdi7q1dihi"; depends=[Rcpp]; }; wdman = derive2 { name="wdman"; version="0.2.5"; sha256="1yf41lsrr9dbf5n4f5hv9mlmzl736fhnp9gxkm2g9apws6gsig02"; depends=[assertthat binman processx semver yaml]; }; + wdnr_gis = derive2 { name="wdnr.gis"; version="0.1.0"; sha256="1c47qr95qqq32p2wbd55289wn5zqzzdc5ja96d5bsdhyzf05npsf"; depends=[arcpullr dplyr ggplot2 httr jsonlite rlang sf]; }; wdpar = derive2 { name="wdpar"; version="1.0.6"; sha256="1vsijgwr2ck304yldhw1n5szqfc26s4h072x6yk7nc1ivshfls5c"; depends=[assertthat cli countrycode curl httr lwgeom progress rappdirs RSelenium sf sp tibble wdman xml2]; }; - weathercan = derive2 { name="weathercan"; version="0.4.0"; sha256="1fgc4sqg82jqs2zn1nj0ihsqyf7lp99jnxzdymgd1mglwbnq4b5d"; depends=[dplyr httr lubridate memoise purrr readr rlang rvest stringi stringr tidyr tidyselect xml2]; }; + weathercan = derive2 { name="weathercan"; version="0.5.0"; sha256="0cpqchfzz7g7ik005w4rbxcrfqbhwaqwi860xv1wp5sk5mb3ad73"; depends=[dplyr httr lubridate memoise purrr readr rlang rvest stringi stringr tidyr tidyselect xml2]; }; weathermetrics = derive2 { name="weathermetrics"; version="1.2.2"; sha256="1hjhgsy3v8328hv4czxxz7kp68sxc10sy10f3dv5j8f6pka6qlsp"; depends=[]; }; weatherr = derive2 { name="weatherr"; version="0.1.3"; sha256="14w7kkja3a1zmdc7l084iprx1czqgdfjzjc29wdlwzmaiq02c4d3"; depends=[ggmap lubridate RJSONIO XML]; }; webTRISr = derive2 { name="webTRISr"; version="0.2.0"; sha256="10xj8qvibhnywsxd1yb4laz6b38qwn483a7bflizsndsgrbzdi5n"; depends=[dplyr httr jsonlite lubridate magrittr purrr readr sf stringr]; }; - webchem = derive2 { name="webchem"; version="1.1.0"; sha256="1vaghhr9k9sq50882ga5dckgjspyqfsrp9n0dglm9cqdbk3gyl7i"; depends=[base64enc data_tree dplyr httr jsonlite purrr RCurl rlang rvest stringr tibble xml2]; }; - webdriver = derive2 { name="webdriver"; version="1.0.5"; sha256="0l3nz7gf62jlkvkn5sfxfvn0prxz3ds7nlpfb1yhnmdljhbzrgzf"; depends=[base64enc callr curl debugme httr jsonlite R6 showimage withr]; }; + webchem = derive2 { name="webchem"; version="1.1.1"; sha256="0q7iszc91vm58ij89mfn445ijhkyrrsgrp8khwpx82v5ja01fkv1"; depends=[base64enc data_tree dplyr httr jsonlite purrr rlang rvest stringr tibble xml2]; }; + webdeveloper = derive2 { name="webdeveloper"; version="0.1.0"; sha256="1bxirwf3m868qr63rxvqlrmjv1sgh9ml8f393zyrb3f2cdxh6nfq"; depends=[html5 httpuv stringi]; }; + webdriver = derive2 { name="webdriver"; version="1.0.6"; sha256="0k87any9rvv367p2zwy89r3rxszsq3w78pzdq36by4ijn659la2l"; depends=[base64enc callr curl debugme httr jsonlite R6 showimage withr]; }; webex = derive2 { name="webex"; version="0.9.1"; sha256="0z85cfnjicy3q1n77ilrh43h6xh6bpr1f1iinzfk1r64031h90yl"; depends=[jsonlite knitr rmarkdown]; }; - webfakes = derive2 { name="webfakes"; version="1.1.1"; sha256="1d86aa5cgdbpj7vgvyghjsjjqjyfarnz0rh64i9r692j62yc45j0"; depends=[]; }; + webfakes = derive2 { name="webfakes"; version="1.1.3"; sha256="0ncy5rma28b600vaxll7vlfhjx5xxpmhc2bkvhjb5z1cravpl4kx"; depends=[]; }; webglobe = derive2 { name="webglobe"; version="1.0.3"; sha256="0gbg4pai4cn7hdc1943aqpx4bn3vgc82zp93a1wl6bmmajv1da4b"; depends=[geojsonio httpuv jsonlite]; }; - webmockr = derive2 { name="webmockr"; version="0.7.4"; sha256="0ya9j2c744glyx13vm2m86znlvwl0iy9zc5vhffr684b7wxw7y8g"; depends=[base64enc crul curl fauxpas jsonlite magrittr R6 urltools]; }; + webmockr = derive2 { name="webmockr"; version="0.8.0"; sha256="0j40srwi0yasmllb9wsww4m6zkiyzqd549cis4dxd7c7p24hak8j"; depends=[base64enc crul curl fauxpas jsonlite magrittr R6 urltools]; }; webp = derive2 { name="webp"; version="1.0"; sha256="1h17g2zaq6ipsb1w6ix9m68ddmp7dspmaqflqkskylh2n8jhk8cd"; depends=[]; }; webr = derive2 { name="webr"; version="0.1.5"; sha256="03yhlla74i71nphrfhr5sd57ykj7rjanh2a8nw3cq22rg9g668jk"; depends=[dplyr flextable ggforce ggplot2 magrittr moonBook psych purrr rlang rrtable scales shiny sjlabelled stringr tibble tidyr tidyselect vcd ztable]; }; webreadr = derive2 { name="webreadr"; version="0.4.0"; sha256="0l3l5g4zj5faxqi1kqwx9lq91gbj40z2q3csrsmpal08qnwkxs90"; depends=[Rcpp readr]; }; websearchr = derive2 { name="websearchr"; version="0.0.3"; sha256="1c6dwm5g5rjq0b12zrwwi5k9760jb0ph83v4j2gm8zm0x9dhiqm9"; depends=[]; }; webshot = derive2 { name="webshot"; version="0.5.2"; sha256="0gq4h8cw51z95yvsnf38kj5l58wgljkm0dalmi8mn1sp06bxr0zi"; depends=[callr jsonlite magrittr]; }; - websocket = derive2 { name="websocket"; version="1.3.1"; sha256="03kfwfirwvyimd7v0c2x60ryg6syhd4jds5fbg763x23jxrhqj10"; depends=[AsioHeaders BH later R6 Rcpp]; }; + websocket = derive2 { name="websocket"; version="1.4.0"; sha256="0ziqixh05nv8h6m8zlic3zvrbn2b93xnr7pv27gyqb20kh5bmv7x"; depends=[AsioHeaders cpp11 later R6]; }; webuse = derive2 { name="webuse"; version="0.1.3"; sha256="09xvw0v991cq1ck2kfxblp5cngfh9j6swvh5xv420mvky0kshv32"; depends=[haven]; }; webutils = derive2 { name="webutils"; version="1.1"; sha256="16a6ds0fnb6y8i1r9ba1hf1ydb53am57s070b3hi5jmrs84b9qik"; depends=[curl jsonlite]; }; wec = derive2 { name="wec"; version="0.4-1"; sha256="10lqh43536d44d6082rpp11q1323pmjbmgrgb8v9mrk9c1ysf50w"; depends=[dplyr]; }; weco = derive2 { name="weco"; version="1.2"; sha256="1prk8hn782pd8g2rbbaj7y10vjimqs9n8i4rab6aw6fc3k759d6b"; depends=[]; }; - weibull4 = derive2 { name="weibull4"; version="0.1.0"; sha256="065rxwljgjfkxapin3yc1xvk102rl8hcwdqfnps1wbfmrb5yrgj4"; depends=[]; }; + weed = derive2 { name="weed"; version="1.0.6"; sha256="0x08dw4lkx5nhf2sp4adslyk58rrz34ki29vjgv62m1d3pck01p1"; depends=[countrycode dplyr forcats geonames ggplot2 here magrittr purrr readxl rgeos sf stringr tibble tidyr tidytext]; }; + weibull4 = derive2 { name="weibull4"; version="1.0.0"; sha256="1a95yw67iy7dqib33v31apxmskl019zng66jrlflbqx6p2vjdh30"; depends=[]; }; weibullness = derive2 { name="weibullness"; version="1.19.8"; sha256="19s44mxxcnhngifxshsyjr3a9zvbwywmqgby5dxd73yid1p2k9mr"; depends=[]; }; - weibulltools = derive2 { name="weibulltools"; version="1.0.1"; sha256="06blip2dqaz2f3wnghp8yj0qj23s242k3r7bfcka1n52msc58xjz"; depends=[dplyr LearnBayes magrittr plotly Rcpp RcppArmadillo sandwich segmented SPREDA survival]; }; + weibulltools = derive2 { name="weibulltools"; version="2.0.0"; sha256="1flgnsivam9vyrs6hwn3119s5bzczjm5qb1xjwydl1cd6r2984k5"; depends=[dplyr ggplot2 lifecycle magrittr plotly purrr Rcpp RcppArmadillo sandwich segmented SPREDA survival tibble tidyr]; }; weightQuant = derive2 { name="weightQuant"; version="1.0"; sha256="1ngz51wr5qpnb98lfbddwvipcra86dq5whm6z8c4xd921anb15bx"; depends=[doParallel foreach quantreg]; }; weightedScores = derive2 { name="weightedScores"; version="0.9.5.3"; sha256="1wf01z94snwbqp22waz7qays3ymg5lsxpfpafdarad2b6mg5j2g8"; depends=[mvtnorm rootSolve]; }; weightedZdiff = derive2 { name="weightedZdiff"; version="0.1.0"; sha256="1mrhjg0h7qiwya8jrmf5h4gc352ahc6fczlk5kfhqw5vkwr0b1k3"; depends=[]; }; @@ -16601,7 +17271,8 @@ in with self; { weights = derive2 { name="weights"; version="1.0.1"; sha256="1ka2kvzg464vn80qziqy4mrciy9wwd3jfasgq0d33wbiblhmxkj5"; depends=[gdata Hmisc mice]; }; weirs = derive2 { name="weirs"; version="0.25"; sha256="17a0ppi7ghikrwn39zvhg2cvhmnr3w0qi7r9lj22x65ii9nzadd7"; depends=[]; }; welchADF = derive2 { name="welchADF"; version="0.3.2"; sha256="02a8w1dhc2nd74hml4z3cdlx0d2a9rcx47v341kgav620i8bn88g"; depends=[lme4]; }; - wellknown = derive2 { name="wellknown"; version="0.7.0"; sha256="1y185mrp1jk6nhw4w0vvav1llqgp2alwsmdzai711x7v2hyb8jpm"; depends=[BH jsonlite Rcpp wk]; }; + wellknown = derive2 { name="wellknown"; version="0.7.2"; sha256="13z35f8anyiih336sqqdr613bbizh16wpds90x38hyqvr0gaj9ic"; depends=[BH jsonlite Rcpp wk]; }; + welo = derive2 { name="welo"; version="0.1.0"; sha256="03c4mxkp1p6zrwjg1x1fk0rlq2hykd6cw1y2fjq5kryq3i30cgxq"; depends=[boot Rdpack xts]; }; wesanderson = derive2 { name="wesanderson"; version="0.3.6"; sha256="09mr6p2jmqdjq27cz974w5hyxgn929zp9z3inhxqmmh1582fmdi2"; depends=[]; }; wevid = derive2 { name="wevid"; version="0.6.2"; sha256="1ranmqhgfkrky7r4qk563n9nlz2syn3vj85lmfajq01csadzjdpl"; depends=[ggplot2 mclust pROC reshape2 zoo]; }; wfe = derive2 { name="wfe"; version="1.9.1"; sha256="0lcg7hzdll1wqdwydkk96m4n715h8sjn3qwhabm245m0hqhdf7is"; depends=[arm MASS Matrix]; }; @@ -16610,8 +17281,7 @@ in with self; { wflo = derive2 { name="wflo"; version="1.6"; sha256="04qxm1vvmgxbpj1wwj7n48klhsprkj774jnj4qfhqza33mhymydb"; depends=[emstreeR plotrix progress raster rgdal sp]; }; wgaim = derive2 { name="wgaim"; version="2.0-1"; sha256="1qiyfkpsbzjr9xsq5kqq6rlqpndngkn2irdfh3gyi45h6hn118j4"; depends=[ggplot2 qtl]; }; wgeesel = derive2 { name="wgeesel"; version="1.5"; sha256="0lybvsq5168cjybzv2dbyx2z8aakcx7i7ivm8zc90haiispm9n5x"; depends=[bindata CRTgeeDR geepack MASS PoisNor]; }; - whSample = derive2 { name="whSample"; version="0.9.2"; sha256="1xyb0fa7c2haa1gpfq0zgx65igy235pnd6lcvclczysf72fd4vy3"; depends=[data_table dplyr magrittr openxlsx purrr]; }; - whatr = derive2 { name="whatr"; version="1.0.1"; sha256="1nnrirm0c5b053jk5l5gkrwmx4i7y2xgbwbs5qcba61s5w4n4h2x"; depends=[dplyr ggplot2 httr magrittr purrr rlang rvest scales stringr tibble tidyr xml2]; }; + whSample = derive2 { name="whSample"; version="0.9.4"; sha256="16wcq7ppgd7zmnz8nkbjwhzdgaqkp4shgc4bjdk3kikng1b5q802"; depends=[bit64 data_table dplyr magrittr openxlsx purrr]; }; wheatmap = derive2 { name="wheatmap"; version="0.1.0"; sha256="1c1xvzy194vw3idkwkqp9kyrfldzczj30cl15jw1bbnw87zcwdzy"; depends=[colorspace RColorBrewer]; }; whereami = derive2 { name="whereami"; version="0.1.9"; sha256="0mjq9haacsf0zkgh7xxx8dr67hnw5ijjdhaz8c69mfjmd2zfzfwq"; depends=[cli jsonlite rstudioapi]; }; whereport = derive2 { name="whereport"; version="0.1"; sha256="1gdqzr2hrnpxbwl7cfps4m3xja8wkgwfs50i2nailybympvdnxm4"; depends=[dplyr]; }; @@ -16620,38 +17290,38 @@ in with self; { whitening = derive2 { name="whitening"; version="1.2.0"; sha256="08j49kpbybw8j25ckzvbzqxigqzdxb56lryi06kbzcja0mlzrhvb"; depends=[corpcor]; }; whitestrap = derive2 { name="whitestrap"; version="0.0.1"; sha256="1jcnxqxvkhyz9j6jay5834ncv5fxb9qiyyyj3b8al75mqknmn8ra"; depends=[]; }; whoami = derive2 { name="whoami"; version="1.3.0"; sha256="19fwl7z55s4kl2xzwqwh8iwg13kdrv222vyl3kibxgwrjcjwj2y2"; depends=[httr jsonlite]; }; - whoapi = derive2 { name="whoapi"; version="0.1.2"; sha256="0ib0an08xsxan24q8mb5ai375njmkdc61lh4321rzgr25iqvi682"; depends=[httr]; }; - wicket = derive2 { name="wicket"; version="0.4.0"; sha256="1lizzmj69bswzlk18fv2v4yxxc6dynvmkymdiafznzcyyz4a8xnf"; depends=[BH Rcpp]; }; + wiad = derive2 { name="wiad"; version="0.0.1.0"; sha256="1yr1cng5659n8chfghpyfxvqzl8b57vdjzv5m22cbcvrlq6m6p4j"; depends=[abind data_table dplyr DT shiny]; }; widals = derive2 { name="widals"; version="0.6.1"; sha256="1094yaaq2xb0ykvc1j3hs87j1p4h7zgf8mkn4han8iw5fmr9zncy"; depends=[snowfall]; }; widgetframe = derive2 { name="widgetframe"; version="0.3.1"; sha256="0j0d73m72nzfc1wyrgsqr99ldx72adis6pd57mpim55hz0n9l224"; depends=[htmltools htmlwidgets magrittr purrr]; }; widyr = derive2 { name="widyr"; version="0.1.3"; sha256="1mkgkn5lf3q9i3fhkz6v9lxl68kwhjn6bwxi3ks1v3njbsacnkay"; depends=[broom dplyr Matrix purrr reshape2 rlang tidyr tidytext]; }; - wiesbaden = derive2 { name="wiesbaden"; version="1.2.3"; sha256="0bk73zfs97sk38c2wg83dp5n6ssy0fxzppvl16zb0fj798q8lvd7"; depends=[httr jsonlite keyring readr stringi stringr xml2]; }; + wiesbaden = derive2 { name="wiesbaden"; version="1.2.4"; sha256="09p5kmr78lv6s2vdmx8fllsyl8n1dk7gm978s29cjba95zqslysq"; depends=[httr jsonlite keyring readr stringi stringr xml2]; }; wikibooks = derive2 { name="wikibooks"; version="0.2"; sha256="178lhri1b8if2j7y7l9kqgyvmkn4z0bxp5l4dmm97x3pav98c7ks"; depends=[]; }; - wikifacts = derive2 { name="wikifacts"; version="0.4.1"; sha256="0pj4fspcaamffkxmdv40xh6v1sfb2p5gds0mdi9dgw1xvclvh6lg"; depends=[curl magrittr rvest xml2]; }; - wikilake = derive2 { name="wikilake"; version="0.4"; sha256="0pm0brzkf2k6aknwl4b3fba5ly7mhah8qfb0h94fckiaqbnpyx9v"; depends=[maps rvest selectr sp stringi stringr units WikipediR xml2]; }; + wikifacts = derive2 { name="wikifacts"; version="0.4.2"; sha256="1fw1chha6mcrmv1f9rjg01g84bgzkgf1h76l926brjs5gsn4i414"; depends=[magrittr rvest xml2]; }; + wikilake = derive2 { name="wikilake"; version="0.5.0"; sha256="1v79g12d91f28p54vcwjsmipz37cb5fh8g0sgnvs5m89gpi5acja"; depends=[dplyr maps rvest selectr sp stringi stringr tidyr units WikipediR xml2]; }; wikipediatrend = derive2 { name="wikipediatrend"; version="2.1.6"; sha256="11ng7qsb4954mgsz55ix86z0ynh4xgflcp6dzl0y4zi6zdrj87i7"; depends=[ggplot2 glue hellno httr pageviews rvest stringr xml2]; }; wikitaxa = derive2 { name="wikitaxa"; version="0.4.0"; sha256="1z7p7dwgl8x4ambwss5dqlp4zgz52mgj0vhx2bqwizarmx9ji1xs"; depends=[crul curl data_table jsonlite tibble WikidataR xml2]; }; + wilcoxmed = derive2 { name="wilcoxmed"; version="0.0.1"; sha256="0wnwxgm5g4fxdkrb6h124ngaw0s88yr2s8iqshb77vzj12kvb9m1"; depends=[]; }; wildcard = derive2 { name="wildcard"; version="1.1.0"; sha256="0qkzab84z95g5f4fv3v4wisccgd7k9m3210pz4nvm1x8rfaqfjf1"; depends=[magrittr stringi]; }; - wildlifeDI = derive2 { name="wildlifeDI"; version="0.3.0"; sha256="1aqiazrr2sp76777m0isscainhdnn9qp87dwpr4cspk7grbsa53k"; depends=[adehabitatLT rgeos sp]; }; + wildlifeDI = derive2 { name="wildlifeDI"; version="0.4.0"; sha256="0ff9az6x7m9kw36bpk9dpqflbkf29z3pgr5l8lp2i24vb3pa8755"; depends=[adehabitatLT dplyr rgeos sf sp]; }; wildpoker = derive2 { name="wildpoker"; version="1.1"; sha256="1302ain55spz34irmq49sp9b1pvrn2nxmzmqs8m9wdk6g82h3s27"; depends=[]; }; - wilson = derive2 { name="wilson"; version="2.4.0"; sha256="0cb9s7v2c0isp4z8rjxdyzn26k8h6h2z956lznl971hm786pq7z9"; depends=[circlize colourpicker ComplexHeatmap data_table DESeq2 DT factoextra FactoMineR ggplot2 ggrepel gplots heatmaply log4r openssl plotly plyr R6 RColorBrewer reshape rintrojs rje rjson RJSONIO scales shiny shinycssloaders shinydashboard shinyjs shinyWidgets viridis zip]; }; + wilson = derive2 { name="wilson"; version="2.4.2"; sha256="050hi6rigs024is1ry0yymqapgqfhzpp0ghk5ya028k71k22lksx"; depends=[circlize colourpicker ComplexHeatmap data_table DESeq2 DT factoextra FactoMineR ggplot2 ggrepel gplots heatmaply log4r openssl plotly plyr R6 RColorBrewer reshape rintrojs rje rjson RJSONIO scales shiny shinycssloaders shinydashboard shinyjs shinyWidgets viridis zip]; }; winRatioAnalysis = derive2 { name="winRatioAnalysis"; version="0.1.0"; sha256="1msvc06bfzw9clinxbvr5fdw38dff0c0xii46182nwnk5kj0libr"; depends=[data_table JM Matrix MLEcens mvtnorm nlme plyr pssm survival]; }; winch = derive2 { name="winch"; version="0.0.6"; sha256="1mjkbji4618f4sf4hj2lsc6r62pjlvzsvncql9ihcjj52mih9j29"; depends=[procmaps]; }; windAC = derive2 { name="windAC"; version="1.2.4"; sha256="1b41jh1bl0kljr07pwg07cw6qxg5iawjhmj1001fl7jd7pxf90kn"; depends=[mvtnorm sf]; }; - windex = derive2 { name="windex"; version="2.0"; sha256="1w9z7jykac9kb0d5q77hq553bv1da676rsk8928bzls5fwmvbqr3"; depends=[ape geiger phangorn scatterplot3d]; }; - windfarmGA = derive2 { name="windfarmGA"; version="2.3.0"; sha256="0iw5r2q42i8lnjj92jwgpqlkspz82yh1rgkh2i11m3rpnddvkk22"; depends=[calibrate doParallel foreach ggplot2 gstat leaflet magrittr raster RColorBrewer Rcpp rgdal rworldmap sf sp spatstat]; }; - winfapReader = derive2 { name="winfapReader"; version="0.1-1"; sha256="027jqnb91xdrp3aibhfbjx0wb5lcfzsxi8ychjifzja5f22qd6zw"; depends=[lubridate]; }; + windex = derive2 { name="windex"; version="2.0.2"; sha256="1zcxddf9dfkjdrlg5j2n34nmpia5vhw2s0hb28pf3wf4m1z2vrf9"; depends=[ape geiger phangorn scatterplot3d]; }; + windsoraiR = derive2 { name="windsoraiR"; version="0.1.1"; sha256="0jb17pla4bvgwnhlzan9vk2absdp459mz72fn1rrbz2dxzcmf360"; depends=[jsonlite]; }; + winfapReader = derive2 { name="winfapReader"; version="0.1-3"; sha256="1g5z9kg5ws9cdixky2y0c7dw3f7lmh3ykjxrh3jjmkm75gzgs7p0"; depends=[lubridate]; }; wingui = derive2 { name="wingui"; version="0.2"; sha256="0yf6k33qpcjzyb7ckwsxpdw3pcsja2wsf08vaca7qw27yxrbmaa3"; depends=[Rcpp]; }; wiqid = derive2 { name="wiqid"; version="0.3.0"; sha256="0jqnlyw5iljpm7135fgnkwjvxmbjbqiqq6lchwnjmhbb5xd3kbvr"; depends=[coda HDInterval MASS mcmcOutput plotrix truncnorm]; }; wiseR = derive2 { name="wiseR"; version="1.0.1"; sha256="187ylwhk06957x9zm5r0m6w9wg08im83myz3s4gr927ig8yv3b5f"; depends=[arules bnlearn DescTools dplyr DT graph HydeNet igraph linkcomm missRanger psych RBGL Rgraphviz rhandsontable rintrojs shiny shinyalert shinyBS shinycssloaders shinydashboard shinyWidgets visNetwork]; }; - withr = derive2 { name="withr"; version="2.3.0"; sha256="1837vjp35npjrnis1im5xrwj1swpgnms00gkjiz7296l8yckrh1c"; depends=[]; }; - wk = derive2 { name="wk"; version="0.3.3"; sha256="0myyzab808r1i2cdj1zpyrml8xvywak8f589b1yi337wc2q9x9cd"; depends=[Rcpp]; }; + withr = derive2 { name="withr"; version="2.4.2"; sha256="1j5srffi748yxphwli56lkbh4cga0kmz38dyzganzkw0nx66mya8"; depends=[]; }; + wk = derive2 { name="wk"; version="0.4.1"; sha256="0l49pg1ds02h1qji1fi2m67mncvgd1n905i0jx07frdxy0d3b9ys"; depends=[cpp11]; }; wkNNMI = derive2 { name="wkNNMI"; version="1.0.0"; sha256="0qpl1b2134kz9mjl38w93lp3g6kpv9ygv9hygpssm845k02hkw7c"; depends=[foreach infotheo]; }; wkb = derive2 { name="wkb"; version="0.4-0"; sha256="0mah538345npkb06bcj18mb6qnnx8nn7bdqmvqqpbawallh546a9"; depends=[sp]; }; wktmo = derive2 { name="wktmo"; version="1.0.5"; sha256="05pjyk0xsdazbi1x7xfmg097ybybd60zmzzm7sch1ikp05hzn0wb"; depends=[]; }; - wkutils = derive2 { name="wkutils"; version="0.1.0"; sha256="1bkfm9zym37mbjspnlv4klkmxi3101y34szppa9bbahiq9gmn12k"; depends=[Rcpp tibble vctrs wk]; }; + wkutils = derive2 { name="wkutils"; version="0.1.1"; sha256="17v7bc1kcbykf5bqxjqhg5n20r5y4h4wb99zhf17ahr15gvibgr1"; depends=[Rcpp tibble vctrs wk]; }; wmlf = derive2 { name="wmlf"; version="0.1.2"; sha256="0zxw84l5v12r15hpyd1kbajjz3cbkn5g884kmj72y7yi0yi1b6d6"; depends=[waveslim]; }; - wmm = derive2 { name="wmm"; version="1.0.0"; sha256="0f46a69vcz1cb4qmz68gf8h0hq5amilsp9h4gmacmprad49n702g"; depends=[]; }; + wmm = derive2 { name="wmm"; version="1.1.0"; sha256="0l3fv9p5rg8al9yhphh4kv2z39ak6hki3ykg0fawr9sdwvkvax01"; depends=[]; }; wmwpow = derive2 { name="wmwpow"; version="0.1.3"; sha256="03rd75r4wih1w7srhnwqxjkirisb43y1sd2f1wzixqj8lq0dmb25"; depends=[lamW MASS smoothmest]; }; wnl = derive2 { name="wnl"; version="0.6.1"; sha256="0p9hhg6bd2q8li7npjyakl7sr74v9534cplqypp7jgy9pl3wi100"; depends=[numDeriv]; }; wnominate = derive2 { name="wnominate"; version="1.2.5"; sha256="0pvw36jzx90z7ah4f7cyf95csdn5x7n9rh3ddsppa61y1dmjsn5k"; depends=[pscl]; }; @@ -16659,7 +17329,7 @@ in with self; { woeBinning = derive2 { name="woeBinning"; version="0.1.6"; sha256="0x890h5fh59n54587adyzphr956fkg3px8i7c378aq1fs7k35gxs"; depends=[]; }; womblR = derive2 { name="womblR"; version="1.0.4"; sha256="0yjz4nymhqq6aqvxf0a90bw3hi1zqz1zp3mxbv2ns5v5ygh2a10p"; depends=[msm mvtnorm Rcpp RcppArmadillo]; }; wooldridge = derive2 { name="wooldridge"; version="1.3.1"; sha256="0471x3vszf1c4fj9pk5ix8bdmp2bnq1ghnqvwzad9chvvkpzmg3l"; depends=[]; }; - worcs = derive2 { name="worcs"; version="0.1.6"; sha256="1d5qynq1g5qpnlcdlfiwda9sj7nvscc9ag4a5x0ndp1099a2zagv"; depends=[digest gert prereg ranger rmarkdown rticles yaml]; }; + worcs = derive2 { name="worcs"; version="0.1.8"; sha256="00h99f5xk1gaqcdy1qh2dxbmay1310w64paiv68a8003wp7yn6p0"; depends=[digest gert prereg ranger rmarkdown rticles yaml]; }; word_alignment = derive2 { name="word.alignment"; version="1.1"; sha256="0inlq96j4zkjncz2v66amz91l5y3b5lx49qi2jg6jbqdldw7aa02"; depends=[data_table openxlsx]; }; word2vec = derive2 { name="word2vec"; version="0.3.3"; sha256="0ljwxm825is91xkqk64p97xk61kzc8ahvsk31ycjim90rf77grlp"; depends=[Rcpp RcppProgress]; }; wordbankr = derive2 { name="wordbankr"; version="0.3.1"; sha256="14ryaa25abm24wi2gyp0prxsnx1n5f4298zmzjlr08pj0sp7lgv7"; depends=[assertthat DBI dbplyr dplyr purrr quantregGrowth rlang RMySQL robustbase stringr tidyr]; }; @@ -16668,15 +17338,19 @@ in with self; { wordgraph = derive2 { name="wordgraph"; version="0.1.0"; sha256="06q42sjdj7i680zqx66hsvrpmkrlcyxnvsk1lygnqhlv97ycl3vv"; depends=[dplyr ggplot2 ggraph plyr purrr tibble tidygraph]; }; wordmatch = derive2 { name="wordmatch"; version="1.0"; sha256="0zscp361qf79y1zsliga18hc7wj36cnydshrqb9pv67b65njrznz"; depends=[plyr reshape2]; }; wordnet = derive2 { name="wordnet"; version="0.1-15"; sha256="158c5fps4kvfd9mj1im8jb9rv7ipfshyagrv0q3b55ywnkrkvjqb"; depends=[rJava]; }; - wordpressr = derive2 { name="wordpressr"; version="0.1.1"; sha256="1lfrlybakl1virrpb9za16pvadpjrqg2ch1wyw1b8blr165x83zx"; depends=[dplyr glue httr magrittr purrr tibble tidyr]; }; + wordpiece = derive2 { name="wordpiece"; version="1.0.2"; sha256="1iqgwzk5zjgn09vs7jkmi8k0ia2pnzmxrrpw2k7y2cg0g65gj8nz"; depends=[digest purrr rappdirs stringi]; }; + wordpressr = derive2 { name="wordpressr"; version="0.2.2"; sha256="00fang30vr03ad79ncic65f5nn4cync0yk8w4q7kq9cykmf71zl8"; depends=[dplyr glue httr magrittr purrr tibble tidyr]; }; wordsalad = derive2 { name="wordsalad"; version="0.2.0"; sha256="18kgwq6f9ymm1bmbvpmxq9gz5fx0qj64439scr21kk1cvsfl4y88"; depends=[fastTextR text2vec tibble word2vec]; }; wordspace = derive2 { name="wordspace"; version="0.2-6"; sha256="11y57mzd12klwd2xzr38nvlrxg9jsi33mxd8nnvc96hgrjsgwakl"; depends=[cluster iotools MASS Matrix Rcpp sparsesvd]; }; workflowr = derive2 { name="workflowr"; version="1.6.2"; sha256="0m3aq9xxbk4xmqsb59xil56610hgw53gm80z28mq594mhfdh0g3l"; depends=[callr fs getPass git2r glue httpuv httr knitr rmarkdown rprojroot rstudioapi stringr whisker xfun yaml]; }; - workflows = derive2 { name="workflows"; version="0.2.1"; sha256="1mk0pnmpqlhf143mvj9rwvjrrshirz6s83s5hbfalhnyw7hzkfb9"; depends=[cli ellipsis generics glue hardhat parsnip rlang tidyselect]; }; - worldmet = derive2 { name="worldmet"; version="0.9.2"; sha256="13b0apxmd2j7w8rqgyn61c7hvzv2yyqhkyd63rmhzdvnbpkbwaw2"; depends=[doParallel dplyr foreach leaflet openair purrr readr tidyr zoo]; }; + workflows = derive2 { name="workflows"; version="0.2.2"; sha256="19ipcxx4qfz28cjkgr1vny03yhmbd3m2v64v30gk5pf73nazvmaz"; depends=[cli ellipsis generics glue hardhat parsnip rlang tidyselect vctrs]; }; + workflowsets = derive2 { name="workflowsets"; version="0.0.2"; sha256="0kzr2sm9xpikc0r7qzkrm4vm03vxh7vcvqvaqvp727qfbpm4cly0"; depends=[cli dplyr generics ggplot2 prettyunits purrr rlang rsample tibble tidyr tune vctrs withr workflows]; }; + worldmet = derive2 { name="worldmet"; version="0.9.5"; sha256="03dc93b6akah0pf36h0327jb65slsb3bypyv57cnkyxwyvni6w4s"; depends=[doParallel dplyr foreach leaflet openair purrr readr tidyr]; }; worms = derive2 { name="worms"; version="0.2.2"; sha256="183chjdi5qvsmdznvc9igcxaz769a37rwh5nzgvf5zf012a85wir"; depends=[httr plyr]; }; worrms = derive2 { name="worrms"; version="0.4.2"; sha256="1gpbyplfpcrapmci8axarrjjijsgh2dmhnsn79g1lhrafvm2ichs"; depends=[crul data_table jsonlite tibble]; }; wosr = derive2 { name="wosr"; version="0.3.0"; sha256="0fl9mizrjg3r7n7gslsxgaw3k2v63scqmvnv6341q8sq7018hzln"; depends=[httr jsonlite pbapply xml2]; }; + wowa = derive2 { name="wowa"; version="1.0.1"; sha256="0jdw73z5whvb4bb9syhqscllaa31bhs81gmgckxh7w1r3pp42yha"; depends=[Rcpp]; }; + wpa = derive2 { name="wpa"; version="1.4.3"; sha256="1m80mr3scfzhz3a7wx15mwbblmlbhw7m75qlf1vy48jvqm3gwkdr"; depends=[data_table dplyr DT ggplot2 ggraph ggrepel ggwordcloud htmltools igraph magrittr markdown networkD3 proxy purrr reshape2 rmarkdown scales tidyr tidyselect tidytext]; }; wpp2008 = derive2 { name="wpp2008"; version="1.0-1"; sha256="0gd3vjw1fpzhp3qlf1jpc24f76i0pxsjs5pb1v3k2si6df7q4msd"; depends=[]; }; wpp2010 = derive2 { name="wpp2010"; version="1.2-0"; sha256="1h87r1cn4lnx80dprvawsyzfkriscqjgr27gvv7n19wvsx8qd57k"; depends=[]; }; wpp2012 = derive2 { name="wpp2012"; version="2.2-1"; sha256="00283s4r36zzwn67fydrl7ldg6jhn14qkf47h0ifmsky95bd1n5k"; depends=[]; }; @@ -16686,53 +17360,51 @@ in with self; { wppExplorer = derive2 { name="wppExplorer"; version="2.3-4"; sha256="1pbmjg6y543aih8mxf9njfwpm090virhgqf8w0a5yx0jdfjwmz04"; depends=[DT ggplot2 googleVis Hmisc plyr reshape2 shiny shinyjs shinythemes wpp2019]; }; wql = derive2 { name="wql"; version="0.4.9"; sha256="0m16l807mhcjkbqhlzhc24pw4hl78fjyykiszlg337x3qs803fg2"; depends=[ggplot2 reshape2 zoo]; }; wqs = derive2 { name="wqs"; version="0.0.1"; sha256="14qaa9g9v4nqrv897laflib3wwhflyfaf9wpllmbi5xfv9223rcg"; depends=[glm2 Rsolnp]; }; - wrGraph = derive2 { name="wrGraph"; version="1.1.1"; sha256="05zi0j1z30hrf8d2720x7qc87l50x3fyhy0admiz0gag1cv50ras"; depends=[RColorBrewer wrMisc]; }; - wrMisc = derive2 { name="wrMisc"; version="1.5.0"; sha256="1gy0v5silqfndv9myzxvx2gwxj8c3asnqvf65szjyihdfbn75m3k"; depends=[MASS]; }; - wrProteo = derive2 { name="wrProteo"; version="1.3.0"; sha256="1mcj2llkpph14z2kkl924hjs9rizf62fgzhbkd0s79kshhqcjq87"; depends=[knitr limma rmarkdown wrMisc]; }; + wrGraph = derive2 { name="wrGraph"; version="1.2.3"; sha256="00674jxv9d88s41l24m2w573j8lg6rwj8mccwkj11f0265dvkqap"; depends=[RColorBrewer wrMisc]; }; + wrMisc = derive2 { name="wrMisc"; version="1.5.4"; sha256="1cg4nknly6mp1p1cg1q9w329k4b2nzfz2ak6q170k0z87pvx2m4z"; depends=[MASS]; }; + wrProteo = derive2 { name="wrProteo"; version="1.4.1"; sha256="119smm6c8xvvfi1f8rplx9xhiml7kfllrfqfxmlphs5hzr7nks5k"; depends=[knitr limma wrMisc]; }; wrTopDownFrag = derive2 { name="wrTopDownFrag"; version="1.0.2"; sha256="1rdg6rzjz2h514i3c8z89mvj2j3h1s7rr5fry2mq3xvrwrgd3738"; depends=[wrMisc wrProteo]; }; wrangle = derive2 { name="wrangle"; version="0.5.2"; sha256="1b6qgwdjvwbrarp9ylgkb5ia1p5a5g7ws0jyqrwc6hii8z5yj2qb"; depends=[dplyr lazyeval magrittr rlang tidyr]; }; - wrapr = derive2 { name="wrapr"; version="2.0.6"; sha256="161lwmbcc38abayl249cbghss24j6dff0i044w83nsnnq3g9kzn5"; depends=[]; }; - wrassp = derive2 { name="wrassp"; version="0.1.9"; sha256="09z8s0g6l9z4rwnf36w4bd734agd471swz3f24178b4j6m05kqhm"; depends=[tibble]; }; + wrapr = derive2 { name="wrapr"; version="2.0.7"; sha256="0ddlr6swhx9mibi4svlwkpvf1c291bw4qnr44j5734wz2nvyj3s7"; depends=[]; }; + wrassp = derive2 { name="wrassp"; version="1.0.0"; sha256="1vyy19rqj4jkw6r72vqf925lq6ha9s4bwjlsw0byigp9y9cmzmq4"; depends=[tibble]; }; write_snns = derive2 { name="write.snns"; version="0.0-4.2"; sha256="0sxg7z8rnh4lssbivkrfxldv4ivy37wkndzzndpbvq2gbvbjnp4l"; depends=[]; }; - writexl = derive2 { name="writexl"; version="1.3.1"; sha256="1njdhvh8605wd2j8glrbxfyc36p2n88prpq080jn44s9lgfmbgsb"; depends=[]; }; + writexl = derive2 { name="writexl"; version="1.4.0"; sha256="0mfzyn8n5x5x5gf382bqgq61zpw9dymrp5kzdm2sbszplmxf6xry"; depends=[]; }; wrswoR = derive2 { name="wrswoR"; version="1.1.1"; sha256="1q0nc08q8f3kl9yvcivzylykk1ar5j5dw3ian2y9nrzgzri5l10i"; depends=[logging Rcpp]; }; - wrswoR_benchmark = derive2 { name="wrswoR.benchmark"; version="0.2.1"; sha256="0zr6x8d69n72xlad7fw3sa9rqqpii9lylm1rlccrmalhgmzl68ii"; depends=[curl lazyeval]; }; - wru = derive2 { name="wru"; version="0.1-10"; sha256="1ss5h7fk69cxd7k8aiw53ysn88n0s287c89yzyqsgs05a1mr9lwv"; depends=[devtools]; }; - wsbackfit = derive2 { name="wsbackfit"; version="1.0-3"; sha256="06y868c04sbcrfm6ba33j1y8yjri3yjblzl0cicjrkjk34mi9j4g"; depends=[]; }; + wru = derive2 { name="wru"; version="0.1-11"; sha256="18yvkfffhzfna8q5hzml67a2qkbhmbrjv1r5jmslak9bh9z1mbx6"; depends=[devtools]; }; + wsbackfit = derive2 { name="wsbackfit"; version="1.0-5"; sha256="18y2r6v19a4lnpa3y2q0whm5kizmd29r0abj7rcirb9fd5jqrsp2"; depends=[]; }; wsjplot = derive2 { name="wsjplot"; version="0.1.0"; sha256="1vgf823j3ychdnvg4nq59ah4rkv5lpwbg0r7sijir2b18sgxsrbi"; depends=[dplyr ggplot2 magrittr scales stringr]; }; wskm = derive2 { name="wskm"; version="1.4.40"; sha256="0x5nc3bwqawx0k95v088dsx83dm7lw5lkryjvq6bl57bgrcn7n0l"; depends=[fpc lattice latticeExtra]; }; - wsrf = derive2 { name="wsrf"; version="1.7.17"; sha256="0gmlvfcy2iqa5sqhwps3hx0hl9fir8nf5xq62f25sn8i3llw752z"; depends=[Rcpp]; }; - wsyn = derive2 { name="wsyn"; version="1.0.2"; sha256="0jl0wnw11yrbiygcpcnl1yi8xf5dd3sbh0c2yic8dc0p64k6iass"; depends=[fields MASS]; }; + wsrf = derive2 { name="wsrf"; version="1.7.21"; sha256="146sg5s4s0nk8a2iid5f2pnq29qisghpa4adc50r3kjhzgaf1al4"; depends=[Rcpp]; }; + wsyn = derive2 { name="wsyn"; version="1.0.3"; sha256="0515z5435k7v78ir976fxvgpy6zpmwpi5mdgmf6nnn49za6dig7b"; depends=[fields MASS]; }; wtest = derive2 { name="wtest"; version="3.2"; sha256="063ax9mbb2dy33l1cl533mjzpvhf2akw3613pklfjg6bhprlniz7"; depends=[]; }; wux = derive2 { name="wux"; version="2.2-1"; sha256="0iw0kf0wfspnpc83v7gxhcakmp0z34cccnm0jn9c2za9ay9l2swv"; depends=[abind class corpcor fields gdata Hmisc ncdf4 reshape rgdal rgeos rworldmap sp stringr]; }; wv = derive2 { name="wv"; version="0.1.1"; sha256="06xf3c97pjhln1v31waj8rmp4r0y2kp6v2x10pbpvi8m0nf5zfs1"; depends=[coda Rcpp RcppArmadillo simts]; }; wvtool = derive2 { name="wvtool"; version="1.0"; sha256="0x9awj6g5lzqp2lhwgh9ib7jmfdzyhwazrjvw1vwacqqfhbz8qxv"; depends=[]; }; wwntests = derive2 { name="wwntests"; version="1.0.1"; sha256="1algk2f55dg526zjw2ycfx2dq13m3lvfs75444iyp8fvq7j3wbcs"; depends=[ftsa MASS rainbow sde]; }; - wyz_code_metaTesting = derive2 { name="wyz.code.metaTesting"; version="1.1.12"; sha256="17fmbym4kxxnygn91da2crxsq8kqh6sj5pzm197l202av0r9pvjd"; depends=[crayon data_table lubridate tidyr wyz_code_offensiveProgramming]; }; + wyz_code_metaTesting = derive2 { name="wyz.code.metaTesting"; version="1.1.20"; sha256="1w6gwabzj3gx2i9i2wffsyhv6jhv38w821aq1s6pd038mi7774b9"; depends=[crayon data_table lubridate tidyr wyz_code_offensiveProgramming]; }; wyz_code_offensiveProgramming = derive2 { name="wyz.code.offensiveProgramming"; version="1.1.18"; sha256="14wk0hjysz8ravwsmiki7dyllkbygq0l5mg516rbbf0wfq5zl7nl"; depends=[crayon data_table lubridate R6 stringr tidyr]; }; wyz_code_rdoc = derive2 { name="wyz.code.rdoc"; version="1.1.16"; sha256="1f8yd1pkk9aamsx2x59jpa5jgq03hnbf9zrs1ah010sn3l51v1yr"; depends=[crayon data_table digest R6 stringr tidyr wyz_code_offensiveProgramming]; }; wyz_code_testthat = derive2 { name="wyz.code.testthat"; version="1.1.17"; sha256="1hl6gqxpxa3fyzc01i37g9il4vc6z339iir4228yz7ky1x85xjna"; depends=[data_table lubridate R6 tidyr wyz_code_offensiveProgramming]; }; x_ent = derive2 { name="x.ent"; version="1.1.7"; sha256="15qra77dqhj27g3qx92gram4mq4n9fdidygdpvxfmcx7ww3vc6yh"; depends=[ggplot2 jsonlite statmod stringr xtable]; }; x12 = derive2 { name="x12"; version="1.9.3"; sha256="05dzf38vlf73bmwdjs6w32d0b91cs6zgdmg7afw9gs36qfi5fahn"; depends=[stringr x13binary]; }; x12GUI = derive2 { name="x12GUI"; version="0.13.0"; sha256="1mga7g9gwb3nv2qs27lz4n9rp6j3svads28hql88sxaif6is3nk1"; depends=[cairoDevice Hmisc lattice RGtk2 stringr x12]; }; - x13binary = derive2 { name="x13binary"; version="1.1.39-2"; sha256="1if8yayvn6rr98gwp0ypmlk3d9fjf0b9kxir2iwha506aslq70xp"; depends=[]; }; + x13binary = derive2 { name="x13binary"; version="1.1.39-3"; sha256="0ji15a3jjsac6gvmriz5cvwp5rix5kxxlp9yvrg1490rxabd9y27"; depends=[]; }; x3ptools = derive2 { name="x3ptools"; version="0.0.2"; sha256="1a3vdljd51kvd70mq9cr84r536zmby7vkd36a02z2sxabq03cl9s"; depends=[assertthat digest png rgl xml2 zoo]; }; - xLLiM = derive2 { name="xLLiM"; version="2.1"; sha256="1q6ryw9z5wi0amv5f4drz14p36zy8gc2a0s59q10jixhhyas7ycl"; depends=[abind capushe corpcor igraph MASS Matrix]; }; - xROI = derive2 { name="xROI"; version="0.9.17"; sha256="1yidrfqgz4sd8jpq7a4hvcjh7npbg54xnzxjmn8pdgrlzv71dyib"; depends=[colourpicker data_table jpeg lubridate moments raster RCurl rgdal rjson shiny shinyjs sp stringr tiff]; }; - xRing = derive2 { name="xRing"; version="0.1.0"; sha256="17f1jif8yw2508k86p8mjgw1h20ml5wzaff04ix9xq96plqzi8ma"; depends=[dplR imager tcltk2 tkRplotR]; }; + xLLiM = derive2 { name="xLLiM"; version="2.2"; sha256="0gmy3jy1nf0fixgwcgfhrwcd85ran5ic7srzcx46akad828a4znq"; depends=[abind capushe corpcor e1071 glmnet igraph MASS Matrix mda progress randomForest]; }; + xROI = derive2 { name="xROI"; version="0.9.19"; sha256="12q77y33fqrpsvxxys3csmx04q4c7x1snwj1a4f36drmq21l1shc"; depends=[colourpicker data_table jpeg lubridate moments raster RCurl rgdal rjson shiny shinyjs sp stringr tiff]; }; xSub = derive2 { name="xSub"; version="3.0.1"; sha256="0c3jc801pn85wm17jj911spryg6p3gq19im1506zkv8lqwsy1nab"; depends=[countrycode haven RCurl]; }; xVA = derive2 { name="xVA"; version="0.8.5"; sha256="1scn7acp69k80q9ksygj7ns9937yim8iwhpi54ygm28h20jnfllr"; depends=[SACCR Trading]; }; - xaringan = derive2 { name="xaringan"; version="0.19"; sha256="11jdr9iylxnq4gn9hp2i4zv0f89hkdhq3xdaw63a8pdg9znzn5ks"; depends=[htmltools knitr rmarkdown servr xfun]; }; - xaringanthemer = derive2 { name="xaringanthemer"; version="0.3.0"; sha256="0vb4z4w90fpdxxq46z089g4dh7r8jk73mcd63rxwnqaaqr09pxr4"; depends=[colorspace glue purrr whisker]; }; + xaringan = derive2 { name="xaringan"; version="0.20"; sha256="1xm7vz26vmnw290r9kc2306nnw62vi12fhql6hhndd4b8q58vb28"; depends=[htmltools knitr rmarkdown servr xfun]; }; + xaringanthemer = derive2 { name="xaringanthemer"; version="0.3.4"; sha256="0c2grk7capw3nvrxrvdk7qj7gv2i86c1aaswv2i11wrak9rdxhpv"; depends=[colorspace glue purrr whisker]; }; xbreed = derive2 { name="xbreed"; version="1.0.1.1"; sha256="032i04ginyf9dyabfkygnhrkq7lqdvvyw7s41vjimy2kvjrnkkkx"; depends=[BGLR]; }; xdcclarge = derive2 { name="xdcclarge"; version="0.1.0"; sha256="1j8wsidwmfjygqlwavxinv4bqc6rddy42jdmlknsjfrrs49yj8kn"; depends=[nlshrink Rcpp RcppArmadillo]; }; xergm_common = derive2 { name="xergm.common"; version="1.7.8"; sha256="03mjpafwfkmyj5ba84jydap9rp0i602izjlbd511xbxcw6dx2k0b"; depends=[ergm network]; }; xesreadR = derive2 { name="xesreadR"; version="0.2.3"; sha256="1pvdx0mxg2f885bhy4hb3kqzcgva4q7hzzaipkfzyi5lnjdsbc81"; depends=[bupaR data_table dplyr lubridate purrr stringr tidyr XML xml2]; }; - xfun = derive2 { name="xfun"; version="0.19"; sha256="15yyigkl1g9w9d7097hrm94dxn1af333ywr5xdw78qqrw6npn0iv"; depends=[]; }; + xfun = derive2 { name="xfun"; version="0.22"; sha256="0ix3p0iw2c60whn5mvsflh0vhm4yixhw4s9d9v4023qhp077nw9y"; depends=[]; }; xgb2sql = derive2 { name="xgb2sql"; version="0.1.2"; sha256="1gw5dw0ck5hip8mv347zaswrggk395bg2hgn02bvqs0d31jhmgvi"; depends=[data_table xgboost]; }; - xgboost = derive2 { name="xgboost"; version="1.2.0.1"; sha256="16hpvv2hwdzcyg90z7c1g5d2hj011qk8mivy4l2nqd2g7rkjwis4"; depends=[data_table magrittr Matrix stringi]; }; + xgboost = derive2 { name="xgboost"; version="1.4.1.1"; sha256="1i706h6yhayzbqlqa1z6fgjc56kxm3isz0jw6d26fpyfjlw6z64z"; depends=[data_table jsonlite magrittr Matrix]; }; xgobi = derive2 { name="xgobi"; version="1.2-15"; sha256="03ym5mm16rb1bdwrymr393r3xgprp0ign45ryym3g0x2zi8dy557"; depends=[]; }; - xgxr = derive2 { name="xgxr"; version="1.0.9"; sha256="1hci16ly4wzrjyfa7chwn6nnwlfnq77ix2w3gwrvlgfcjisbcsq1"; depends=[assertthat binom dplyr ggplot2 labeling magrittr pander png scales tibble]; }; + xgxr = derive2 { name="xgxr"; version="1.1.1"; sha256="00fd9n2qivfxg2b7vynssc82afa7nskg4akk6cgxnyhcai5jbmra"; depends=[assertthat binom Deriv DescTools dplyr ggplot2 glue gtable Hmisc labeling magrittr minpack_lm pander png RCurl readr scales stringr tibble]; }; xkcd = derive2 { name="xkcd"; version="0.0.6"; sha256="1z2y0ihn68ppay7xkglhw7djki5654g6z4bbpyy41if57z9q554f"; depends=[extrafont ggplot2 Hmisc]; }; xkcdcolors = derive2 { name="xkcdcolors"; version="1.0"; sha256="07fnjv01r3b951dqca2zs9b9f6hsgbpbpsrggvb8rps53kpid0i7"; depends=[FNN]; }; xlink = derive2 { name="xlink"; version="1.0.1"; sha256="02ahgjampy92gcwhv269px5w8651a7j50dn1295zwqxj44lk4g9q"; depends=[survival]; }; @@ -16741,11 +17413,11 @@ in with self; { xlsx2dfs = derive2 { name="xlsx2dfs"; version="0.1.0"; sha256="0bdawr80grks91sy221d33fsk75g20zh3wjg6gvd0zj0m1zvvwvd"; depends=[openxlsx]; }; xlsxjars = derive2 { name="xlsxjars"; version="0.6.1"; sha256="1rka5smm7yqnhhlblpihhciydfap4i6kjaa4a7isdg7qjmzm3h9p"; depends=[rJava]; }; xlutils3 = derive2 { name="xlutils3"; version="0.1.0"; sha256="1cxishi62bd36zlsy5qhzix1p68akdf9kpjg9gfm9aqpcijzccb9"; depends=[magrittr readxl]; }; - xmeta = derive2 { name="xmeta"; version="1.2-1"; sha256="1clyf4jscr23zvj81i8vvyqdkpx3rd35apwj2i2yc7yzmfvqw92w"; depends=[aod glmmML MASS metafor mvmeta numDeriv plotrix]; }; + xmeta = derive2 { name="xmeta"; version="1.3-0"; sha256="1yyqxrdfn23sqfa9765vj5fcwz2v46jvaa9wjkv1w4mvb2k2si4k"; depends=[aod glmmML MASS metafor mvmeta numDeriv plotrix]; }; xml2 = derive2 { name="xml2"; version="1.3.2"; sha256="1kx400v62xkd5xal7rzz7jcarz94ac8g1sh4i2dqr78qwgkzj8nz"; depends=[]; }; xml2relational = derive2 { name="xml2relational"; version="0.1.0"; sha256="03blvks4z7n4wxz5zbrn6c3a3l4hy9clcjpb834pc07ssz3c2v3g"; depends=[fs lubridate rlang stringr tidyr xml2]; }; - xmlconvert = derive2 { name="xmlconvert"; version="0.1.1"; sha256="18jr2666s7kjqrmvrwf82dkryzrw284cj993y3cgmxchb7w0fhir"; depends=[httr lubridate readr stringr tibble xml2]; }; - xmlparsedata = derive2 { name="xmlparsedata"; version="1.0.4"; sha256="177vfyjrqfi3wam8scpsradap1lv35yc25xq745dr7gabg116yrq"; depends=[]; }; + xmlconvert = derive2 { name="xmlconvert"; version="0.1.2"; sha256="0vj5ar61i94if141jzqk7jq091mb2xwzl0x86dj7ddk8y3c1w9dv"; depends=[httr lubridate readr stringr tibble xml2]; }; + xmlparsedata = derive2 { name="xmlparsedata"; version="1.0.5"; sha256="1c6bnz3ng1qw7sfip8wq3a4dn36a4d6rbja0sadn0a4pbsmk8q3n"; depends=[]; }; xmlr = derive2 { name="xmlr"; version="0.1.2"; sha256="00mxdb4899sx5py0ngzh3dvhz1sqsar2hmsrkm4jf0b3q9psc86w"; depends=[]; }; xmlrpc2 = derive2 { name="xmlrpc2"; version="1.1"; sha256="13rfw0civp3hzi4hn31x1idliid1qb73495x4c31z5msd35lzxrs"; depends=[base64enc curl xml2]; }; xmrr = derive2 { name="xmrr"; version="1.1.1"; sha256="1kb4kzxb9rcx9fp1answln0sv9c3wdrk82gz79k0i9ypq7dls2ah"; depends=[dplyr ggplot2 purrr qpdf rlang tibble tidyr]; }; @@ -16755,7 +17427,8 @@ in with self; { xpectr = derive2 { name="xpectr"; version="0.4.0"; sha256="1vdw01x1wmln8y6hfnqdy3frn1bbfzrqjbrvv3dmp23hq98yxxbq"; depends=[checkmate clipr dplyr fansi lifecycle plyr rlang rstudioapi testthat tibble withr]; }; xplain = derive2 { name="xplain"; version="0.2.2"; sha256="152a83ckmhns6yniy87mmjva5bkv5x3phv63l1kkcmrr9bclfgz0"; depends=[httr RCurl readr XML]; }; xplorerr = derive2 { name="xplorerr"; version="0.1.1"; sha256="17h8z9rmqkmm6lm9gipa33mr7zxpzd5xbjk251592mwr79lwsh8n"; depends=[magrittr shiny]; }; - xpose = derive2 { name="xpose"; version="0.4.11"; sha256="1m5h7la7zr28q2610c7wadzwllyywya2vxa7pifjs3fml940lybj"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; + xpose = derive2 { name="xpose"; version="0.4.12"; sha256="0aw0jcin9s6lpwg4ahya2ig7myczqk45kinqpi3c7m03khcilafa"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; + xpose_nlmixr = derive2 { name="xpose.nlmixr"; version="0.2.0"; sha256="12qpykbgjzgwf3n2qc3pr4nv0hifix551i4211vx9l71hvz50paz"; depends=[crayon dplyr ggplot2 magrittr nlme nlmixr rlang stringr tibble tidyr vpc xpose]; }; xpose4 = derive2 { name="xpose4"; version="4.7.1"; sha256="0y2ws8cq2waiikxw2y34s3qinaq5f832k5nglif3avd8gp2fpn3q"; depends=[dplyr gam Hmisc lattice lazyeval readr survival tibble]; }; xptr = derive2 { name="xptr"; version="1.1.3"; sha256="0352vs8dz61hgpwnf3r9r9haz3adg2wk9qxzrv313p1fcyfjz91v"; depends=[]; }; xray = derive2 { name="xray"; version="0.2"; sha256="1ibj92ljlj8a5rmbrci691yhpd4kwrfyl944nzl2dcbf58l01dzq"; depends=[dplyr foreach ggplot2 lubridate scales]; }; @@ -16766,38 +17439,39 @@ in with self; { xspliner = derive2 { name="xspliner"; version="0.0.4"; sha256="1j3wlw39r3ahhdfq3rks1zhnlmz14f4wk7bl7gf94yffasqg6k2r"; depends=[dplyr ggplot2 magrittr mgcv pdp pROC purrr tidyr]; }; xtable = derive2 { name="xtable"; version="1.8-4"; sha256="077xfm0gphvhsay75amd9v90zk57kjgrrlgih04fyrbqqblc1gjs"; depends=[]; }; xtal = derive2 { name="xtal"; version="1.15"; sha256="1zq3vd5x3vw6acn47yd2x7kflr9sm3znmdkm68cs64ha54jbl3vs"; depends=[]; }; - xtensor = derive2 { name="xtensor"; version="0.11.1-0"; sha256="1l9216z46m45vnc69j4qx336ln82qgpagi5m9qa5pabvcpz9b23p"; depends=[Rcpp]; }; + xtensor = derive2 { name="xtensor"; version="0.13.2-0"; sha256="0jwmcrhdnj02f4qbwyf4z4rpgyrw7wc3m9fwqp8l5f57g5ywkjgf"; depends=[Rcpp]; }; xtermStyle = derive2 { name="xtermStyle"; version="3.0.5"; sha256="1q4qq8w4sgxbbb1x0i4k5xndvwisvjszg830wspwb37wigxz8xvz"; depends=[]; }; xtreg2way = derive2 { name="xtreg2way"; version="1.0.0"; sha256="0wllz0frakmadavgpqhd2b8fiw6wgwh5wzd270czc6cm5bq9gfng"; depends=[MASS Matrix pracma]; }; xts = derive2 { name="xts"; version="0.12.1"; sha256="0b6a7mpyk9aw6axas7nz01gadczprwwfhii01fz31z26z555i06n"; depends=[zoo]; }; xtune = derive2 { name="xtune"; version="0.1.0"; sha256="0bpf1cx7v7q0a1jip04xd0bjg9ilagrf7wg7a9y0m6wgw7s2b9jn"; depends=[glmnet selectiveInference]; }; + xutils = derive2 { name="xutils"; version="0.0.1"; sha256="1s62libl2q22ml1j383l96yg07df6lcn0hr69hmczqpys3yszkvx"; depends=[Rcpp]; }; xwf = derive2 { name="xwf"; version="0.2-3"; sha256="1byj6vjk2abm9j919107xsa3nd40zbsvxaldvv4ml3c47k1fg3kc"; depends=[mgcv]; }; xxIRT = derive2 { name="xxIRT"; version="2.1.2"; sha256="0b8yv8ixmcjiv9hlvpfdknx815smy7df7f2ixifnvhxxafgf1fwq"; depends=[ggplot2 glpkAPI lpSolveAPI reshape2]; }; - xyloplot = derive2 { name="xyloplot"; version="2.0"; sha256="0d400wfcqb68nihrf84s6rr3ibnb50py93hmb50zhmbs307lh31x"; depends=[]; }; xyz = derive2 { name="xyz"; version="0.2"; sha256="13w4sb4pvgciwr8wsz785dafj2k2kpx7znz46r5d32wx88vkycp4"; depends=[Rcpp]; }; yaImpute = derive2 { name="yaImpute"; version="1.0-32"; sha256="1zvkrmlj48ahg9jq0fkbn7j603fmmld57yc0gjfas2mqa7cfbvh8"; depends=[]; }; yacca = derive2 { name="yacca"; version="1.1.1"; sha256="1hxgkyxipk27p74vdkiy8a3wjymhcsc6ad3y9mf15qsl2xim6wwl"; depends=[]; }; yager = derive2 { name="yager"; version="0.1.1"; sha256="178ypdr3f0w9rb4ci8q2hshr62b7993m8q6zxc4pf0msq175n1ml"; depends=[lhs MLmetrics randtoolbox]; }; yakmoR = derive2 { name="yakmoR"; version="0.1.1"; sha256="09aklz79s0911p2wnpd7gc6vrbr9lmiskhkahsc63pdigggmq9f7"; depends=[BBmisc checkmate Rcpp]; }; yaml = derive2 { name="yaml"; version="2.2.1"; sha256="10r7g26x73am45niigm3k466030nymnr3v3fjljafzrr5aybf58i"; depends=[]; }; - yamlet = derive2 { name="yamlet"; version="0.5.2"; sha256="0vm87jp44myg118sc9712imrz83nhfwxabnjkzi8a36hdiyhpq80"; depends=[csv dplyr encode ggplot2 rlang spork units xtable yaml]; }; - yamlme = derive2 { name="yamlme"; version="0.1.0"; sha256="0834rfc2d9awdvj9xirxywjhkh2nvp7fy68rd7l3yzz14rfv8c40"; depends=[knitr testthat]; }; + yamlet = derive2 { name="yamlet"; version="0.7.5"; sha256="0nxnjiwgnmqpzrb6532l8kwxj2c741bj1vabmx0dayg7sa1fl4c2"; depends=[csv dplyr encode ggplot2 rlang spork tidyr units xtable yaml]; }; + yamlme = derive2 { name="yamlme"; version="0.1.1"; sha256="1cknx8ndcb9rz1j7z27244vba8hxyh5sa9zwsv6rwk9g1c52vmyg"; depends=[]; }; yap = derive2 { name="yap"; version="0.1.1"; sha256="0m126vpfvlmwkpy14i9wbzr51hb8r6s3wcdm3vp9izfccpnxfxl2"; depends=[lhs randtoolbox]; }; - yardstick = derive2 { name="yardstick"; version="0.0.7"; sha256="1yrvlhn4gxyn9f20z5yv3xam0j0a8z362jwa32r33r0g0jk5z2fq"; depends=[dplyr generics pROC rlang tidyselect]; }; + yaps = derive2 { name="yaps"; version="1.2.5"; sha256="0309vc67v5kfbdcah5gnvdqwdxir4k1ik47dw6msw2hvg6lpqvqf"; depends=[circular cowplot data_table ggplot2 ggrepel nloptr plyr Rcpp RcppEigen reshape2 splusTimeSeries tictoc TMB viridis zoo]; }; + yardstick = derive2 { name="yardstick"; version="0.0.8"; sha256="13b0lyj2k0r568mwlyz9yvp9156rzlj4jqnjazaffh9vwqh4whir"; depends=[dplyr generics pROC rlang tidyselect vctrs]; }; yarr = derive2 { name="yarr"; version="0.1.2"; sha256="16q109jrydckz7s1rkmr2sh8q92cgr1c534fvpbh3h0bc3fvvf8g"; depends=[]; }; yarrr = derive2 { name="yarrr"; version="0.1.5"; sha256="1258bj7x4icaxfabnnd3fgwydnqbzxkih7zw0sdlwdax3q8fw5c5"; depends=[BayesFactor circlize jpeg]; }; yasp = derive2 { name="yasp"; version="0.2.0"; sha256="0fza8h9y1wmarsmjcvw4r970d6j4ii795pd2h4xh9nlsirv50adi"; depends=[]; }; yatah = derive2 { name="yatah"; version="0.1.0"; sha256="0ayy0h399g3csn106vvq6j4h6w0sgzw33b7gj1hk05nc8hdzrmna"; depends=[ape purrr stringr]; }; ycinterextra = derive2 { name="ycinterextra"; version="0.1"; sha256="0hr37izbbmxqkjy6a7q8vcn0vs8an1ck9y8xfjpl5z0rygi8xc1v"; depends=[mcGlobaloptim]; }; yesno = derive2 { name="yesno"; version="0.1.2"; sha256="1n9v8m1wkk9p2ahl7d1khbffxmshv68q1v44v04y4v1k6qjvm0i2"; depends=[]; }; - yhat = derive2 { name="yhat"; version="2.0-2"; sha256="09lxfqfr6zy4zxy1p5ragsrbnbbbn5a15l47chj65hqklbnmw6ag"; depends=[boot miscTools plotrix yacca]; }; + yhat = derive2 { name="yhat"; version="2.0-3"; sha256="00cbzj2bvr2pfspycqyf7jrdqyfg63zx25b6r9k3khafvn0ch7h1"; depends=[boot miscTools plotrix yacca]; }; yhatr = derive2 { name="yhatr"; version="0.15.1"; sha256="18g2cr1kjxnfw6cwzl62ynppfv1zz732kbx18zq8918l85kx6wbw"; depends=[httr jsonlite stringr]; }; ykmeans = derive2 { name="ykmeans"; version="1.0"; sha256="0xfji2fmslvc059kk3rwkv575ffzl787sa9d4vw5hxnsmkn8lq50"; depends=[foreach plyr]; }; yll = derive2 { name="yll"; version="1.0.0"; sha256="0lf3cd6pfzki29nk2iy0vd6v4dw6zlsbrjh2839zq5vlpiimsvck"; depends=[]; }; - ymlthis = derive2 { name="ymlthis"; version="0.1.2"; sha256="01jfkf9ymj8p0gvcd491i7rfaw3mj101jqbkbxmwhv7rl4r2vmql"; depends=[crayon fs glue magrittr miniUI purrr rlang rmarkdown rstudioapi shiny shinyBS stringr usethis whoami withr yaml]; }; + ymlthis = derive2 { name="ymlthis"; version="0.1.4"; sha256="1nwb6frb6y1q401lxnhpcvnsnzzi9w7n45nlnbs3jn17bz31w1vh"; depends=[crayon fs glue magrittr miniUI purrr rlang rmarkdown rstudioapi shiny shinyBS stringr usethis whoami withr yaml]; }; yonder = derive2 { name="yonder"; version="0.2.0"; sha256="1ilzn17w6skd0dhwxyrgnfzyazafp8hsi8q6pfxz6k16cd668mc0"; depends=[htmltools magrittr shiny]; }; - yorkr = derive2 { name="yorkr"; version="0.0.12"; sha256="1kmwnhk2n8y2y7cynffkxl8ac4n4d4srwfsfblnyfn4r1g6l2wrl"; depends=[dplyr ggplot2 gridExtra reshape2 rpart_plot yaml]; }; - yotover = derive2 { name="yotover"; version="0.3.2"; sha256="1alfw005k17830xgqa18hvyc1q058d9znjcc6kp2f6d0hc9mwjzb"; depends=[broom cli crayon DBI dbplyr dplyr duckdb ggplot2 httr lmtest magrittr Matrix msm purrr rappdirs rstudioapi sandwich tibble tidyr]; }; + yorkr = derive2 { name="yorkr"; version="0.0.22"; sha256="0ai6v6di796x5nk83i6x371rbr8x8xbxh2447vlf3zybppqbyigp"; depends=[dplyr ggplot2 gridExtra lubridate reshape2 rpart_plot yaml]; }; + yotover = derive2 { name="yotover"; version="0.3.5"; sha256="13ifa2b94g9iv405hddiw77k3hryaaf72w2jd1d5ln49p2fhixhc"; depends=[broom cli crayon DBI dbplyr dplyr duckdb ggplot2 httr lmtest magrittr Matrix msm purrr rappdirs rstudioapi sandwich tibble tidyr]; }; youtubecaption = derive2 { name="youtubecaption"; version="1.0.0"; sha256="15cafl7b03xrql2y2ayy6ajf6v764wym3xqs4pbzlf6ncy8qwl5r"; depends=[dplyr magrittr purrr reticulate stringr tibble writexl]; }; ypr = derive2 { name="ypr"; version="0.5.1"; sha256="15544gyxzavbamjfjsiq662c9y2zkfxn14a481318358sdhln5vn"; depends=[chk ggplot2 lifecycle purrr scales yesno]; }; yuima = derive2 { name="yuima"; version="1.9.6"; sha256="1iqcv6m2lbdnpkcmgbmjhdn233pq3b2g6s9naiq3ks0fyv04zpar"; depends=[boot cubature expm glassoFast mvtnorm Rcpp RcppArmadillo zoo]; }; @@ -16809,8 +17483,8 @@ in with self; { zTree = derive2 { name="zTree"; version="1.0.6"; sha256="1mywxrx6bw7dzhrdwyxbjzc8ikgvw423zycyji0jjr69cfhpmywv"; depends=[plyr]; }; zalpha = derive2 { name="zalpha"; version="0.2.0"; sha256="0wyk4smrch5c0jnzi8z0in1hcbfsddgw4n28dljj917wyg5cnmqd"; depends=[]; }; zbank = derive2 { name="zbank"; version="0.1.0"; sha256="0vzvlri3sncvbz2cdg8wzlpskm1lq9ji0jrfy5cx4ib19m6gxhpc"; depends=[crul jsonlite tibble]; }; - zcurve = derive2 { name="zcurve"; version="1.0.7"; sha256="0v3lk11my8a8y9zbjb2ii35i5vfhlhvsh597zqlvq4div1a81rh4"; depends=[evmix nleqslv Rcpp Rdpack]; }; - zdeskR = derive2 { name="zdeskR"; version="0.1.0"; sha256="1445bkngmv6zzw5vxd3jfwcp8hv5mjs6h9rignndznlax0szv80n"; depends=[dplyr httr jsonlite magrittr plyr purrr tibble tidyr tidyselect]; }; + zcurve = derive2 { name="zcurve"; version="1.0.8"; sha256="1n78gg3zj41gxnpf3arypfwl9hwsimfdbmmiyadaz41iqfpw1dxh"; depends=[evmix nleqslv Rcpp Rdpack]; }; + zdeskR = derive2 { name="zdeskR"; version="0.1.1"; sha256="0fqayn2g7903qs51x4ymy0aq36bwrgvp1k2701cd02zvnxy91l3j"; depends=[dplyr httr jsonlite magrittr plyr purrr tidyr]; }; zeallot = derive2 { name="zeallot"; version="0.1.0"; sha256="1sd1igcfnv27pa3bqxlbyxchi562h7grnjg1l7wxx3bwr49i57s3"; depends=[]; }; zebu = derive2 { name="zebu"; version="0.1.3.0"; sha256="1rlcrvhic110h8r0mqwhkzq8w566jfymxpcwv63bvs7fd8j98vsv"; depends=[foreach ggplot2 iterators plyr reshape2]; }; zeitgebr = derive2 { name="zeitgebr"; version="0.3.5"; sha256="1h2zx3ah1xdyyag40ragrv7gvpnlzqmappbnjp971dn9khqdxfqs"; depends=[behavr data_table lomb pracma WaveletComp]; }; @@ -16824,18 +17498,21 @@ in with self; { zic = derive2 { name="zic"; version="0.9.1"; sha256="1vd64ljigf6iwgzlgdxgj65nlwir176h7ddznddpaz2abh6n6zwp"; depends=[coda Rcpp RcppArmadillo]; }; zip = derive2 { name="zip"; version="2.1.1"; sha256="0b3wmbx5v0i1scylgk4nli2ljg4p12wx7a1sqljklv9969wl3p8i"; depends=[]; }; zipR = derive2 { name="zipR"; version="0.1.1"; sha256="1aaw3dslhsw3zgxvkc1v60vsk44x64i4qmjwx0gq4f7dad1rbiqp"; depends=[]; }; - zipangu = derive2 { name="zipangu"; version="0.2.1"; sha256="0jqr9byzdz6k0prdsr7d6yk0d8d412hplg9iclgfdx2cj1kk6w7r"; depends=[dplyr lifecycle lubridate magrittr purrr rlang stringi stringr tibble]; }; - zipcodeR = derive2 { name="zipcodeR"; version="0.2.0"; sha256="1zm5pikjdnw9n9dlxrnxkgn9j3ixpmbs46lf75ik98nck8ndkrr3"; depends=[dplyr rlang stringr]; }; + zipangu = derive2 { name="zipangu"; version="0.2.3"; sha256="03msi9jz3wld83ny8za93mpnb1d856wi9ls08apih23x4272y8g2"; depends=[arabic2kansuji dplyr lifecycle lubridate magrittr purrr rlang stringi stringr tibble]; }; + zipcodeR = derive2 { name="zipcodeR"; version="0.3.0"; sha256="0pkj08kar2mzlkmi4i3samyjhy3vxx7mhgfm0z5zdhpp33i5gz50"; depends=[dplyr raster rlang stringr tidycensus tidyr udunits2]; }; zipfR = derive2 { name="zipfR"; version="0.6-70"; sha256="15ng7rj7qbgxajx8jb9kv04xmbidg9wwzxr2xaskmlaxrxlqac8c"; depends=[]; }; zipfextR = derive2 { name="zipfextR"; version="1.0.2"; sha256="03rlvvw7rfbhsbwd5njmgkkkrxq1lgjdydmpkn6h1hi97pc0gbhh"; depends=[copula tolerance VGAM]; }; ziphsmm = derive2 { name="ziphsmm"; version="2.0.6"; sha256="0lm6m2g9jd1v7gxv4viych8c59phbvz1yly1ydgajl8q251d8n87"; depends=[pracma Rcpp RcppArmadillo]; }; + zlog = derive2 { name="zlog"; version="1.0.0"; sha256="1d5j31p0h3rrn230087h3ngpvwknlisjv0f1qdbicdj9m177spci"; depends=[]; }; zoeppritz = derive2 { name="zoeppritz"; version="1.0-8"; sha256="1711szx9zz17q6pfinyzlyrw7m9772c8ywlixqar2l165bkjalgm"; depends=[]; }; zoib = derive2 { name="zoib"; version="1.5.4"; sha256="10hv5li1l9gm1bl3k3c9qcmzkqa4ri0kccrsgw1mn8ddn11g9m0a"; depends=[abind coda Formula matrixcalc rjags]; }; zoltr = derive2 { name="zoltr"; version="0.5.1"; sha256="12zh7y3pwidclscgvd0b0iaqq9j5y8mc8xd6pz4vs0jy5qs3ahar"; depends=[base64url dplyr httr jsonlite magrittr MMWRweek mockery readr rlang webmockr]; }; zonator = derive2 { name="zonator"; version="0.6.0"; sha256="1plxchpd4ypp36phl13pi9yvlrqi3lk83lv5rldrhdqynhcgfw2k"; depends=[ggplot2 raster RColorBrewer reshape2 rgdal]; }; - zoo = derive2 { name="zoo"; version="1.8-8"; sha256="1rrw431jwaxd9xljp73f15rhcxvwc0xlyrmr0ghi5fj7a03c932f"; depends=[lattice]; }; + zonebuilder = derive2 { name="zonebuilder"; version="0.0.1"; sha256="1r1b8dqh1hhi4p4b5nnap4y5lmls86zfiks16n36qk0pz4n71bb1"; depends=[RColorBrewer sf]; }; + zoo = derive2 { name="zoo"; version="1.8-9"; sha256="18vjywalpgzqyk66gajb8x1yp8avdaaf11ykynld9fd8cy82bgmp"; depends=[lattice]; }; zooaRch = derive2 { name="zooaRch"; version="1.2"; sha256="0grc378xppv0303sf4flfqz5002vq5a23nzbq4bsff41rww7dihc"; depends=[ggplot2]; }; zooimage = derive2 { name="zooimage"; version="5.5.2"; sha256="0ck8w0zb9l1n9xvjwqshq9q9l8pigy3yslq2hnfbgcwk17kk9mp8"; depends=[digest DT filehash jpeg MASS mda mlearning png shiny svDialogs svMisc tiff]; }; + zoolog = derive2 { name="zoolog"; version="0.3.1"; sha256="0md4kmnk0gwl3kmc7id7v878x0z90jwkl01cilafsv556bhzj1m4"; depends=[Rdpack stringi]; }; zoom = derive2 { name="zoom"; version="2.0.4"; sha256="03f5rxfr6ncf1j6vpn7pip21q7ylj4bx0a5xphqb6x6i33lxf1g5"; depends=[]; }; zoon = derive2 { name="zoon"; version="0.6.5"; sha256="02y29vr2yn8al69km8faiqrwjrc1r3hsvw3dg8lwjr65cxw1krip"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 rworldmap sp testthat]; }; zscorer = derive2 { name="zscorer"; version="0.3.1"; sha256="0aijhs0fyird5gq68x4dxchb02mxa7ijk10k9zjhngghxbjj7iqn"; depends=[shiny]; }; diff --git a/third_party/nixpkgs/pkgs/development/r-modules/default.nix b/third_party/nixpkgs/pkgs/development/r-modules/default.nix index 254dfbb178..c4fb1f2530 100644 --- a/third_party/nixpkgs/pkgs/development/r-modules/default.nix +++ b/third_party/nixpkgs/pkgs/development/r-modules/default.nix @@ -248,7 +248,6 @@ let Cardinal = [ pkgs.which ]; chebpol = [ pkgs.fftw ]; ChemmineOB = [ pkgs.openbabel pkgs.pkg-config ]; - cit = [ pkgs.gsl_1 ]; curl = [ pkgs.curl.dev ]; data_table = [pkgs.zlib.dev] ++ lib.optional stdenv.isDarwin pkgs.llvmPackages.openmp; devEMF = [ pkgs.xorg.libXft.dev pkgs.x11 ]; @@ -323,14 +322,12 @@ let RNetCDF = [ pkgs.netcdf pkgs.udunits ]; RODBC = [ pkgs.libiodbc ]; rpanel = [ pkgs.bwidget ]; - rpg = [ pkgs.postgresql ]; Rpoppler = [ pkgs.poppler ]; RPostgreSQL = [ pkgs.postgresql pkgs.postgresql ]; RProtoBuf = [ pkgs.protobuf ]; RSclient = [ pkgs.openssl.dev ]; Rserve = [ pkgs.openssl ]; Rssa = [ pkgs.fftw.dev ]; - rtiff = [ pkgs.libtiff.dev ]; runjags = [ pkgs.jags ]; RVowpalWabbit = [ pkgs.zlib.dev pkgs.boost ]; rzmq = [ pkgs.zeromq pkgs.pkg-config ]; @@ -491,9 +488,7 @@ let "DeducerText" "Demerelate" "detrendeR" - "dgmb" "dpa" - "DSpat" "dynamicGraph" "dynBiplotGUI" "EasyqpcR" @@ -568,7 +563,6 @@ let "PredictABEL" "prefmod" "PrevMap" - "ProbForecastGOP" "r4ss" "RandomFields" "rareNMtests" diff --git a/third_party/nixpkgs/pkgs/development/r-modules/generate-r-packages.R b/third_party/nixpkgs/pkgs/development/r-modules/generate-r-packages.R index 510eccd3f4..da9e0970b0 100755 --- a/third_party/nixpkgs/pkgs/development/r-modules/generate-r-packages.R +++ b/third_party/nixpkgs/pkgs/development/r-modules/generate-r-packages.R @@ -3,7 +3,7 @@ library(data.table) library(parallel) cl <- makeCluster(10) -biocVersion <- 3.11 +biocVersion <- 3.12 snapshotDate <- Sys.Date()-1 mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/bioc/src/contrib/") diff --git a/third_party/nixpkgs/pkgs/development/scheme-modules/scheme-bytestructures/default.nix b/third_party/nixpkgs/pkgs/development/scheme-modules/scheme-bytestructures/default.nix new file mode 100644 index 0000000000..67d9e39af6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/scheme-modules/scheme-bytestructures/default.nix @@ -0,0 +1,39 @@ +{ lib +, stdenv +, fetchFromGitHub +, guile +, autoreconfHook +, pkg-config +}: + +stdenv.mkDerivation rec { + pname = "scheme-bytestructures"; + version = "1.0.10"; + + src = fetchFromGitHub { + owner = "TaylanUB"; + repo = pname; + rev = "v${version}"; + sha256 = "04oDvwvzTRzAVyywbcCm3Ug3p3xNbxjI7nOKYakEZZI="; + }; + + postConfigure = '' + sed -i '/moddir\s*=/s%=.*%=''${out}/share/guile/site%' Makefile; + sed -i '/godir\s*=/s%=.*%=''${out}/share/guile/ccache%' Makefile; + ''; + + nativeBuildInputs = [ + autoreconfHook pkg-config + ]; + buildInputs = [ + guile + ]; + + meta = with lib; { + description = "Structured access to bytevector contents"; + homepage = "https://github.com/TaylanUB/scheme-bytestructures"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ ethancedwards8 ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/tools/ammonite/default.nix b/third_party/nixpkgs/pkgs/development/tools/ammonite/default.nix index eb827882b7..680217acfb 100644 --- a/third_party/nixpkgs/pkgs/development/tools/ammonite/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/ammonite/default.nix @@ -1,5 +1,5 @@ -{ lib, stdenv, fetchurl, jre, nixosTests, writeScript, common-updater-scripts, git -, nixfmt, nix, coreutils, gnused, disableRemoteLogging ? true }: +{ lib, stdenv, fetchurl, jre, nixosTests, writeScript, common-updater-scripts +, git, nixfmt, nix, coreutils, gnused, disableRemoteLogging ? true }: with lib; @@ -9,7 +9,7 @@ let common = { scalaVersion, sha256 }: stdenv.mkDerivation rec { pname = "ammonite"; - version = "2.3.8"; + version = "2.4.0"; src = fetchurl { url = @@ -75,10 +75,10 @@ let in { ammonite_2_12 = common { scalaVersion = "2.12"; - sha256 = "1kzk0437h2wd9jhwkvjkiaj6mscz4bh85iv266x9zz4zssb355hs"; + sha256 = "K8JII6SAmnBjMWQ9a3NqSLLuP1OLcbwobj3G+OCiLdA="; }; ammonite_2_13 = common { scalaVersion = "2.13"; - sha256 = "0js84m6yqjd7d77md38z6nk3qzlm1ms8brzczaw05zq2c90pdbz7"; + sha256 = "2F35qhWI6hNb+Eh9ZTDznqo116yN7MZIGVchaAIM36A="; }; } diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/Gemfile b/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/Gemfile new file mode 100644 index 0000000000..1ff5490b0a --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/Gemfile @@ -0,0 +1,2 @@ +source "https://rubygems.org" +gem "brakeman" diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/Gemfile.lock b/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/Gemfile.lock new file mode 100644 index 0000000000..13425cf9ee --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/Gemfile.lock @@ -0,0 +1,13 @@ +GEM + remote: https://rubygems.org/ + specs: + brakeman (5.0.4) + +PLATFORMS + ruby + +DEPENDENCIES + brakeman + +BUNDLED WITH + 2.1.4 diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/default.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/default.nix index 3ac6b34f94..72c4b1fbc3 100644 --- a/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/default.nix @@ -1,11 +1,11 @@ -{ lib, ruby, buildRubyGem }: +{ lib, ruby, bundlerApp, bundlerUpdateScript }: -buildRubyGem rec { - inherit ruby; - name = "${gemName}-${version}"; - gemName = "brakeman"; - version = "5.0.0"; - source.sha256 = "0k1ynqsr9b0vnxqb7d5hbdk4q1i98zjzdnx4y1ylikz4rmkizf91"; +bundlerApp rec { + pname = "brakeman"; + exes = [ "brakeman" ]; + gemdir = ./.; + + passthru.updateScript = bundlerUpdateScript "brakeman"; meta = with lib; { description = "Static analysis security scanner for Ruby on Rails"; diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/gemset.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/gemset.nix new file mode 100644 index 0000000000..f37158353e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/brakeman/gemset.nix @@ -0,0 +1,12 @@ +{ + brakeman = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1czqmrqbli2cnw4vv4pzz8bk78c7lpcnnyba74cj632swv1za6jd"; + type = "gem"; + }; + version = "5.0.4"; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/checkstyle/default.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/checkstyle/default.nix index ae95157a8e..4c735de89d 100644 --- a/third_party/nixpkgs/pkgs/development/tools/analysis/checkstyle/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/checkstyle/default.nix @@ -1,12 +1,12 @@ { lib, stdenv, fetchurl, makeWrapper, jre }: stdenv.mkDerivation rec { - version = "8.42"; + version = "8.44"; pname = "checkstyle"; src = fetchurl { url = "https://github.com/checkstyle/checkstyle/releases/download/checkstyle-${version}/checkstyle-${version}-all.jar"; - sha256 = "sha256-SYLr6qQp/kHzviwzCaXEnYTHHuH3j5ZzRLi8gs8xAao="; + sha256 = "sha256-tXTU5A4mKQ0DDWCE3VUXB3fbanHyFNSIcTMJ3NRlj6A="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/codeql/default.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/codeql/default.nix index d256b6e767..25d61d2393 100644 --- a/third_party/nixpkgs/pkgs/development/tools/analysis/codeql/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/codeql/default.nix @@ -3,7 +3,7 @@ , zlib , xorg , freetype -, alsaLib +, alsa-lib , jdk11 , curl , lttng-ust @@ -31,7 +31,7 @@ stdenv.mkDerivation rec { xorg.libXtst xorg.libXrender freetype - alsaLib + alsa-lib jdk11 stdenv.cc.cc.lib curl diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/dotenv-linter/default.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/dotenv-linter/default.nix index f477da365d..51e43555d5 100644 --- a/third_party/nixpkgs/pkgs/development/tools/analysis/dotenv-linter/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/dotenv-linter/default.nix @@ -5,16 +5,16 @@ rustPlatform.buildRustPackage rec { pname = "dotenv-linter"; - version = "3.0.0"; + version = "3.1.0"; src = fetchFromGitHub { owner = "dotenv-linter"; repo = "dotenv-linter"; rev = "v${version}"; - sha256 = "sha256-3Lj5GtWGyWDkZPhxYQu7UWzmh7TO5wk1UJ0lek1jTto="; + sha256 = "sha256-hhaMI2Z97aT/8FxxtWpn+o3BSo26iyBP+ucpO3x4AbQ="; }; - cargoSha256 = "sha256-FDkxJuZPzDrgLJgefkRUPS+0Ys3DaBOD3XAuS/Z6TtI="; + cargoSha256 = "sha256-F9Xyg8/qp0j0+jyd5EVe2idocubzu+Cj6yAwrHuabvM="; meta = with lib; { description = "Lightning-fast linter for .env files. Written in Rust"; diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/flow/default.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/flow/default.nix index ea1aee669c..599908b493 100644 --- a/third_party/nixpkgs/pkgs/development/tools/analysis/flow/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/flow/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "flow"; - version = "0.152.0"; + version = "0.154.0"; src = fetchFromGitHub { owner = "facebook"; repo = "flow"; rev = "refs/tags/v${version}"; - sha256 = "1af9z6xah3rk99pv984nikkpq8jzl5r0fccb1gdhmi7y5a6y6g1m"; + sha256 = "sha256-QqTHhcEgMfq4+1G3aSAvcyU26kNKiFc3vOTyFRo8l40="; }; installPhase = '' @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { install -Dm644 resources/shell/bash-completion $out/share/bash-completion/completions/flow ''; - buildInputs = (with ocamlPackages; [ ocaml findlib ocamlbuild ocaml-migrate-parsetree-2-1 dtoa core_kernel sedlex_2 ocaml_lwt lwt_log lwt_ppx ppx_deriving ppx_gen_rec ppx_tools_versioned visitors wtf8 ]) + buildInputs = (with ocamlPackages; [ ocaml findlib ocamlbuild ocaml-migrate-parsetree-2 dtoa core_kernel sedlex_2 ocaml_lwt lwt_log lwt_ppx ppx_deriving ppx_gen_rec ppx_tools_versioned visitors wtf8 ]) ++ lib.optionals stdenv.isDarwin [ CoreServices ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/frama-c/default.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/frama-c/default.nix index a10d015e9f..ab82aed8e5 100644 --- a/third_party/nixpkgs/pkgs/development/tools/analysis/frama-c/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/frama-c/default.nix @@ -15,7 +15,14 @@ let mlgmpidl num ocamlgraph + stdlib-shims why3 + re + seq + sexplib + sexplib0 + parsexp + base yojson zarith ]; @@ -24,12 +31,12 @@ in stdenv.mkDerivation rec { pname = "frama-c"; - version = "22.0"; - slang = "Titanium"; + version = "23.0-rc1"; + slang = "Vanadium"; src = fetchurl { url = "http://frama-c.com/download/frama-c-${version}-${slang}.tar.gz"; - sha256 = "1mq1fijka95ydrla486yr4w6wdl9l7vmp512s1q00b0p6lmfwmkh"; + sha256 = "1z9f9a217bav3vfc99kq57d5rza6j7hr91ndviwkgcaib6wc5hcv"; }; preConfigure = lib.optionalString stdenv.cc.isClang "configureFlagsArray=(\"--with-cpp=clang -E -C\")"; @@ -37,7 +44,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoconf wrapGAppsHook ]; buildInputs = with ocamlPackages; [ - ncurses ocaml findlib ltl2ba ocamlgraph yojson menhirLib camlzip + ncurses ocaml findlib ltl2ba ocamlgraph ocamlgraph_gtk yojson menhirLib camlzip lablgtk coq graphviz zarith apron why3 mlgmpidl doxygen gdk-pixbuf ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/nix-linter/default.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/nix-linter/default.nix index 279a69327f..f01886c883 100644 --- a/third_party/nixpkgs/pkgs/development/tools/analysis/nix-linter/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/nix-linter/default.nix @@ -17,18 +17,17 @@ , containers , hnix , bytestring -, fetchpatch }: mkDerivation rec { pname = "nix-linter-unstable"; - version = "2020-09-25"; + version = "2021-06-16"; src = fetchFromGitHub { owner = "Synthetica9"; repo = "nix-linter"; - rev = "2516a8cda41f9bb553a1c3eca38e3dd94ebf53de"; - sha256 = "07mn2c9v67wsm57jlxv9pqac9hahw4618vngmj2sfbgihx8997kb"; + rev = "74707ed48dcc58dbfa27ae25ee0e044c072cc344"; + sha256 = "17scghkinpx3pzlw3hw023ybnd8cy7bqfy8b48vwaq8a7bnm2rs3"; }; isLibrary = false; @@ -37,14 +36,6 @@ mkDerivation rec { executableHaskellDepends = [ streamly mtl path pretty-terminal text base aeson cmdargs containers hnix bytestring path-io ]; testHaskellDepends = [ tasty tasty-hunit tasty-th ]; - patches = [ - # Fix compatibility with hnix≥0.13.0 https://github.com/Synthetica9/nix-linter/pull/51 - (fetchpatch { - url = "https://github.com/Synthetica9/nix-linter/commit/f73acacd8623dc25c9a35f8e04e4ff33cc596af8.patch"; - sha256 = "139fm21hdg3vcw8hv35kxj4awd52bjqbb76mpzx191hzi9plj8qc"; - }) - ]; - description = "Linter for Nix(pkgs), based on hnix"; homepage = "https://github.com/Synthetica9/nix-linter"; license = lib.licenses.bsd3; diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/qcachegrind/default.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/qcachegrind/default.nix index 75729d1eea..1f7c6641b1 100644 --- a/third_party/nixpkgs/pkgs/development/tools/analysis/qcachegrind/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/qcachegrind/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, qmake, qtbase, perl, python, php, kcachegrind }: +{ lib, stdenv, qmake, qtbase, perl, python, php, kcachegrind, wrapQtAppsHook }: let name = lib.replaceStrings ["kcachegrind"] ["qcachegrind"] kcachegrind.name; @@ -10,7 +10,7 @@ in stdenv.mkDerivation { buildInputs = [ qtbase perl python php ]; - nativeBuildInputs = [ qmake ]; + nativeBuildInputs = [ qmake wrapQtAppsHook ]; dontWrapQtApps = true; @@ -33,9 +33,13 @@ in stdenv.mkDerivation { install -Dm644 kcachegrind/48-apps-kcachegrind.png "$out/share/icons/hicolor/48x48/apps/kcachegrind.png" ''); + preFixup = '' + wrapQtApp "$out/bin/qcachegrind" + ''; + meta = with lib; { description = "A Qt GUI to visualize profiling data"; - license = licenses.gpl2; + license = licenses.gpl2Plus; platforms = platforms.unix; maintainers = with maintainers; [ periklis ]; }; diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/radare2/default.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/radare2/default.nix index f51f0f9368..a8e7c10ce4 100644 --- a/third_party/nixpkgs/pkgs/development/tools/analysis/radare2/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/radare2/default.nix @@ -28,13 +28,13 @@ stdenv.mkDerivation rec { pname = "radare2"; - version = "5.3.0"; + version = "5.3.1"; src = fetchFromGitHub { owner = "radare"; repo = "radare2"; rev = version; - sha256 = "sha256-xndnRVlqTB/NH1ROo7xkftLP7DufsJu4CCA9MCOEeng="; + sha256 = "sha256-VS8eG5RXwKtJSLmyaSifopJU7WYGMUcznn+burPqEYE="; }; postInstall = '' diff --git a/third_party/nixpkgs/pkgs/development/tools/analysis/tflint/default.nix b/third_party/nixpkgs/pkgs/development/tools/analysis/tflint/default.nix index 137b3c2c1a..9666bf006d 100644 --- a/third_party/nixpkgs/pkgs/development/tools/analysis/tflint/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/analysis/tflint/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "tflint"; - version = "0.29.0"; + version = "0.29.1"; src = fetchFromGitHub { owner = "terraform-linters"; repo = pname; rev = "v${version}"; - sha256 = "1ciwr2bwbxnw8366wvgl5ga3y2qj46i0h3yp3av1x9n2r8rddrlh"; + sha256 = "1pkz8y3da7i4a3nm79a0640xjj4wfkx3dz6614c4hynqn5svji82"; }; vendorSha256 = "0k8v49sr0jmljfl4fa5pnvzd5k3pg865h201114l6cs257sdkczk"; diff --git a/third_party/nixpkgs/pkgs/development/tools/azcopy/default.nix b/third_party/nixpkgs/pkgs/development/tools/azcopy/default.nix index 0be3f5c0b7..06bff61fcd 100644 --- a/third_party/nixpkgs/pkgs/development/tools/azcopy/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/azcopy/default.nix @@ -2,18 +2,18 @@ buildGoModule rec { pname = "azure-storage-azcopy"; - version = "10.10.0"; + version = "10.11.0"; src = fetchFromGitHub { owner = "Azure"; repo = "azure-storage-azcopy"; rev = "v${version}"; - sha256 = "sha256-gWU219QlV+24RxnTHqQzQeGZHzVwmBXNKU+3QI6WvHI="; + sha256 = "sha256-mti93UDFgHQKJt3z1sjCkT71TZtwh2YnhTyUCi5tS5c="; }; subPackages = [ "." ]; - vendorSha256 = "sha256-d965Rt8W74bsIZAZPZLe3twuUpp4wrnNc0qwjsKikOE="; + vendorSha256 = "sha256-NEW1qXOxFPmDFUTciJkqwutZd3+sVkHgoZgQO8Gsdwk="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/tools/backblaze-b2/default.nix b/third_party/nixpkgs/pkgs/development/tools/backblaze-b2/default.nix index fd1cc24119..171885d989 100644 --- a/third_party/nixpkgs/pkgs/development/tools/backblaze-b2/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/backblaze-b2/default.nix @@ -12,15 +12,17 @@ let in python3Packages.buildPythonApplication rec { pname = "backblaze-b2"; - version = "2.4.0"; + version = "2.5.0"; src = python3Packages.fetchPypi { inherit version; pname = "b2"; - sha256 = "sha256-nNQDdSjUolj3PjWRn1fPBAEtPlgeent2PxzHqwH1Z6s="; + sha256 = "0sh9k9fnj73ydqnk056m01xkilpxh7f4597cnczqhy21lxzr3d45"; }; postPatch = '' + substituteInPlace requirements.txt \ + --replace 'docutils==0.16' 'docutils' substituteInPlace setup.py \ --replace 'setuptools_scm<6.0' 'setuptools_scm' ''; diff --git a/third_party/nixpkgs/pkgs/development/tools/bacon/default.nix b/third_party/nixpkgs/pkgs/development/tools/bacon/default.nix index 1cf066e6b4..52f0d29ed6 100644 --- a/third_party/nixpkgs/pkgs/development/tools/bacon/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/bacon/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "bacon"; - version = "1.1.5"; + version = "1.1.6"; src = fetchFromGitHub { owner = "Canop"; repo = pname; rev = "v${version}"; - sha256 = "0wyx216q9q7y60bnnw4cbpv9zlbnjm2hwq0llkjw60fp3qalj9am"; + sha256 = "sha256-0/fQhBHkoI/0PhuUDLGfyjytgEEJWSr1P67Rh0vGDnA="; }; - cargoSha256 = "1pii5ajl3xgylrm20pkwbd1lk7gv0pshl1cxjfna0l63q56v7f21"; + cargoSha256 = "sha256-O1jJXnvPLxJmcnf3qpdcpdrogQ7FtjHF8uUxQRWLDyg="; buildInputs = lib.optional stdenv.isDarwin CoreServices; diff --git a/third_party/nixpkgs/pkgs/development/tools/bazel-watcher/default.nix b/third_party/nixpkgs/pkgs/development/tools/bazel-watcher/default.nix index 657704a653..e10a455c09 100644 --- a/third_party/nixpkgs/pkgs/development/tools/bazel-watcher/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/bazel-watcher/default.nix @@ -56,7 +56,7 @@ buildBazelPackage rec { sed -e '/^FILE:@bazel_gazelle_go_repository_tools.*/d' -i $bazelOut/external/\@*.marker ''; - sha256 = "0rwwjjj6zaj4hdcbsbp0di53xn6203r2vgpddhdrp8iph9ab60cg"; + sha256 = "1j175z3d4fbi4pl35py7yjq7ywrvwin6id131jv32hx0ck4g1m46"; }; buildAttrs = { diff --git a/third_party/nixpkgs/pkgs/development/tools/buf/default.nix b/third_party/nixpkgs/pkgs/development/tools/buf/default.nix index 8d76b8925d..c1060744f4 100644 --- a/third_party/nixpkgs/pkgs/development/tools/buf/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/buf/default.nix @@ -2,30 +2,54 @@ , buildGoModule , fetchFromGitHub , protobuf +, git }: buildGoModule rec { pname = "buf"; - version = "0.41.0"; + version = "0.43.2"; src = fetchFromGitHub { owner = "bufbuild"; repo = pname; rev = "v${version}"; - sha256 = "sha256-f1UcvsXWW+fMAgTRtHkEXmUN/DTrJ/Xd+9HbR2FjFog="; + sha256 = "sha256-Go0wLcJrxMgB67WlAI7TwX2UU2sQ/yfmC0h2igOkjc4="; + leaveDotGit = true; # Required by TestWorkspaceGit }; + vendorSha256 = "sha256-HT0dsGniBoQW2Y7MhahDeFvE0nCASoPdzHETju0JuRY="; patches = [ ./skip_test_requiring_network.patch ]; + nativeBuildInputs = [ protobuf ]; + checkInputs = [ git ]; + + ldflags = [ "-s" "-w" ]; + preCheck = '' export PATH=$PATH:$GOPATH/bin + # To skip TestCloneBranchAndRefToBucket + export CI=true ''; - nativeBuildInputs = [ protobuf ]; + installPhase = '' + runHook preInstall - vendorSha256 = "sha256-XMGXVsSLEzuzujX5Fg3LLkgzyJY+nIBJEO9iI2t9eGc="; + mkdir -p "$out/bin" + dir="$GOPATH/bin" + # Only install required binaries, don't install testing binaries + for file in \ + "buf" \ + "protoc-gen-buf-breaking" \ + "protoc-gen-buf-lint" \ + "protoc-gen-buf-check-breaking" \ + "protoc-gen-buf-check-lint"; do + cp "$dir/$file" "$out/bin/" + done + + runHook postInstall + ''; meta = with lib; { description = "Create consistent Protobuf APIs that preserve compatibility and comply with design best-practices"; diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/bazel/bazel-remote/default.nix b/third_party/nixpkgs/pkgs/development/tools/build-managers/bazel/bazel-remote/default.nix index 711b971c2d..314a1a8b05 100644 --- a/third_party/nixpkgs/pkgs/development/tools/build-managers/bazel/bazel-remote/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/bazel/bazel-remote/default.nix @@ -5,16 +5,16 @@ buildGoModule rec { pname = "bazel-remote"; - version = "2.0.1"; + version = "2.1.1"; src = fetchFromGitHub { owner = "buchgr"; repo = pname; rev = "v${version}"; - sha256 = "193amcx4nk7mr51jcawym46gizqmfkvksjxm64pf7s3wraf00v01"; + sha256 = "sha256-tPjjYudUI+LlmdnEvHh+kUpAbmhiNPYhjf8fMglrzIM="; }; - vendorSha256 = "1sxv9mya8plkn3hpjgfpzgwlh4m3cbhpywqv86brj2h9i4ad0gl5"; + vendorSha256 = "sha256-JNVzy4WbpwH9ZfO78AHQM8pak/ZVQqapxxs9QraMhDo="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/bear/default.nix b/third_party/nixpkgs/pkgs/development/tools/build-managers/bear/default.nix index e7b0c1d105..42fa584a89 100644 --- a/third_party/nixpkgs/pkgs/development/tools/build-managers/bear/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/bear/default.nix @@ -18,13 +18,13 @@ stdenv.mkDerivation rec { pname = "bear"; - version = "3.0.9"; + version = "3.0.13"; src = fetchFromGitHub { owner = "rizsotto"; repo = pname; rev = version; - sha256 = "xac8PYo3qYjtQbDy8piOz5BQQpcVlAvMCv1qHrVZmPQ="; + sha256 = "sha256-oMrTH3GjxiLBKX0i3ZuV+bNqpA7PkoAQAb/08Q/uELs="; }; nativeBuildInputs = [ cmake pkg-config ]; @@ -59,7 +59,7 @@ stdenv.mkDerivation rec { homepage = "https://github.com/rizsotto/Bear"; license = licenses.gpl3Plus; platforms = platforms.unix; - maintainers = [ maintainers.babariviere ]; + maintainers = with maintainers; [ babariviere qyliss ]; # ld: symbol(s) not found for architecture x86_64 broken = stdenv.isDarwin; }; diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/bear/no-double-relative.patch b/third_party/nixpkgs/pkgs/development/tools/build-managers/bear/no-double-relative.patch index f4d247fa57..257c7ffea3 100644 --- a/third_party/nixpkgs/pkgs/development/tools/build-managers/bear/no-double-relative.patch +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/bear/no-double-relative.patch @@ -1,14 +1,22 @@ -diff --git a/source/config.h.in b/source/config.h.in -index 728c234..a3e76c6 100644 ---- a/source/config.h.in -+++ b/source/config.h.in -@@ -65,6 +65,6 @@ constexpr char VERSION[] = "@CMAKE_PROJECT_VERSION@"; +diff --git i/source/config.h.in w/source/config.h.in +index ffcce3a..0caba6d 100644 +--- i/source/config.h.in ++++ w/source/config.h.in +@@ -107,7 +107,7 @@ namespace cmd { + } - constexpr char CITNAMES_DEFAULT_PATH[] = "@ROOT_INSTALL_PREFIX@/@CMAKE_INSTALL_BINDIR@/citnames"; - constexpr char INTERCEPT_DEFAULT_PATH[] = "@ROOT_INSTALL_PREFIX@/@CMAKE_INSTALL_BINDIR@/intercept"; --constexpr char LIBRARY_DEFAULT_PATH[] = "@ROOT_INSTALL_PREFIX@/@CMAKE_INSTALL_LIBEXECDIR@/@CMAKE_SHARED_LIBRARY_PREFIX@exec@CMAKE_SHARED_LIBRARY_SUFFIX@"; --constexpr char WRAPPER_DEFAULT_PATH[] = "@ROOT_INSTALL_PREFIX@/@CMAKE_INSTALL_LIBEXECDIR@/wrapper"; --constexpr char WRAPPER_DIR_DEFAULT_PATH[] = "@ROOT_INSTALL_PREFIX@/@CMAKE_INSTALL_LIBEXECDIR@/wrapper.d"; -+constexpr char LIBRARY_DEFAULT_PATH[] = "@CMAKE_INSTALL_LIBEXECDIR@/@CMAKE_SHARED_LIBRARY_PREFIX@exec@CMAKE_SHARED_LIBRARY_SUFFIX@"; -+constexpr char WRAPPER_DEFAULT_PATH[] = "@CMAKE_INSTALL_LIBEXECDIR@/wrapper"; -+constexpr char WRAPPER_DIR_DEFAULT_PATH[] = "@CMAKE_INSTALL_LIBEXECDIR@/wrapper.d"; + namespace wrapper { +- constexpr char DEFAULT_PATH[] = "@ROOT_INSTALL_PREFIX@/@PRIVATE_INSTALLDIR@/wrapper"; ++ constexpr char DEFAULT_PATH[] = "@PRIVATE_INSTALLDIR@/wrapper"; + constexpr char DEFAULT_DIR_PATH[] = "@ROOT_INSTALL_PREFIX@/@PRIVATE_INSTALLDIR@/wrapper.d"; + + constexpr char FLAG_VERBOSE[] = "--verbose"; +@@ -120,7 +120,7 @@ namespace cmd { + } + + namespace library { +- constexpr char DEFAULT_PATH[] = "@ROOT_INSTALL_PREFIX@/@PRIVATE_INSTALLDIR@/@CMAKE_SHARED_LIBRARY_PREFIX@exec@CMAKE_SHARED_LIBRARY_SUFFIX@"; ++ constexpr char DEFAULT_PATH[] = "@PRIVATE_INSTALLDIR@/@CMAKE_SHARED_LIBRARY_PREFIX@exec@CMAKE_SHARED_LIBRARY_SUFFIX@"; + + constexpr char KEY_REPORTER[] = "INTERCEPT_REPORT_COMMAND"; + constexpr char KEY_DESTINATION[] = "INTERCEPT_REPORT_DESTINATION"; diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/bmake/setup-hook.sh b/third_party/nixpkgs/pkgs/development/tools/build-managers/bmake/setup-hook.sh index ae8f78ec90..c5ca27dd91 100644 --- a/third_party/nixpkgs/pkgs/development/tools/build-managers/bmake/setup-hook.sh +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/bmake/setup-hook.sh @@ -1,3 +1,13 @@ +addMakeFlags() { + export prefix="$out" + export MANDIR="${!outputMan}/share/man" + export MANTARGET=man + export BINOWN= + export STRIP_FLAG= +} + +preConfigureHooks+=(addMakeFlags) + bmakeBuildPhase() { runHook preBuild diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/cmake/default.nix b/third_party/nixpkgs/pkgs/development/tools/build-managers/cmake/default.nix index b04eac35b0..702652db87 100644 --- a/third_party/nixpkgs/pkgs/development/tools/build-managers/cmake/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/cmake/default.nix @@ -8,6 +8,7 @@ , useOpenSSL ? !isBootstrap, openssl , useNcurses ? false, ncurses , withQt5 ? false, qtbase +, buildDocs ? (!isBootstrap && (useNcurses || withQt5)), sphinx, texinfo }: stdenv.mkDerivation (rec { @@ -35,14 +36,16 @@ stdenv.mkDerivation (rec { ] ++ lib.optional stdenv.isCygwin ./3.2.2-cygwin.patch; - outputs = [ "out" ]; + outputs = [ "out" ] + ++ lib.optionals buildDocs [ "man" "info" ]; setOutputFlags = false; setupHook = ./setup-hook.sh; depsBuildBuild = [ buildPackages.stdenv.cc ]; - nativeBuildInputs = [ setupHook pkg-config ]; + nativeBuildInputs = [ setupHook pkg-config ] + ++ lib.optionals buildDocs [ texinfo ]; buildInputs = [] ++ lib.optionals useSharedLibraries [ bzip2 curlMinimal expat libarchive xz zlib libuv rhash ] @@ -68,6 +71,11 @@ stdenv.mkDerivation (rec { "--docdir=share/doc/${pname}${version}" ] ++ (if useSharedLibraries then [ "--no-system-jsoncpp" "--system-libs" ] else [ "--no-system-libs" ]) # FIXME: cleanup ++ lib.optional withQt5 "--qt-gui" + ++ lib.optionals buildDocs [ + "--sphinx-build=${sphinx}/bin/sphinx-build" + "--sphinx-man" + "--sphinx-info" + ] # Workaround https://gitlab.kitware.com/cmake/cmake/-/issues/20568 ++ lib.optionals stdenv.hostPlatform.is32bit [ "CFLAGS=-D_FILE_OFFSET_BITS=64" diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/gup/default.nix b/third_party/nixpkgs/pkgs/development/tools/build-managers/gup/default.nix index dfa65736f9..7fa8feb8e3 100644 --- a/third_party/nixpkgs/pkgs/development/tools/build-managers/gup/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/gup/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchFromGitHub, nix-update-source, lib, python3 , which, runtimeShell, pychecker ? null }: stdenv.mkDerivation rec { - version = "0.7.0"; + version = "0.8.0"; src = fetchFromGitHub { owner = "timbertson"; repo = "gup"; - rev = "version-0.7.0"; - sha256 = "1pwnmlq2pgkkln9sgz4wlb9dqlqw83bkf105qljnlvggc21zm3pv"; + rev = "version-${version}"; + sha256 = "1zjd76jyb5zc9w3l368723bjmxjl05s096g8ipwncfks1p9hdgf3"; }; pname = "gup"; nativeBuildInputs = [ python3 which pychecker ]; @@ -18,20 +18,23 @@ stdenv.mkDerivation rec { mkdir $out cp -r python/bin $out/bin ''; - passthru.updateScript = '' - #!${runtimeShell} - set -e - echo - cd ${toString ./.} - ${nix-update-source}/bin/nix-update-source \ - --prompt version \ - --replace-attr version \ - --set owner timbertson \ - --set repo gup \ - --set type fetchFromGitHub \ - --set rev 'version-{version}' \ - --modify-nix default.nix - ''; + passthru.updateScript = [ + runtimeShell + "-c" + '' + set -e + echo + cd ${toString ./.} + ${nix-update-source}/bin/nix-update-source \ + --prompt version \ + --replace-attr version \ + --set owner timbertson \ + --set repo gup \ + --set type fetchFromGitHub \ + --set rev 'version-{version}' \ + --modify-nix default.nix + '' + ]; meta = { inherit (src.meta) homepage; description = "A better make, inspired by djb's redo"; diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/qbs/default.nix b/third_party/nixpkgs/pkgs/development/tools/build-managers/qbs/default.nix index 7e46e39b43..d2d382f28d 100644 --- a/third_party/nixpkgs/pkgs/development/tools/build-managers/qbs/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/qbs/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "qbs"; - version = "1.18.0"; + version = "1.19.1"; src = fetchFromGitHub { owner = "qbs"; repo = "qbs"; rev = "v${version}"; - sha256 = "sha256-W1ky3PWPzfKygY+diBld+BqTAxJvNw9mqw3owcQ6no4="; + sha256 = "sha256-td+xXxpjty5jgorlVySG+8yUd9hujInXIlCfqCRUg9k="; }; nativeBuildInputs = [ qmake ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/default.nix b/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/default.nix index d551b98b5b..9be3d232fb 100644 --- a/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/default.nix @@ -39,6 +39,12 @@ let HOME=. escript bootstrap ''; + checkPhase = '' + HOME=. escript ./rebar3 ct + ''; + + doCheck = true; + installPhase = '' mkdir -p $out/bin cp rebar3 $out/bin/rebar3 @@ -101,6 +107,9 @@ let # instruct rebar3 to always load a certain plugin. It is necessary since # REBAR_GLOBAL_CONFIG_DIR doesn't seem to work for this. patches = [ ./skip-plugins.patch ./global-plugins.patch ]; + + # our patches cause the tests to fail + doCheck = false; })); in stdenv.mkDerivation { pname = "rebar3-with-plugins"; @@ -118,9 +127,11 @@ let {ok, _} = zip:extract(Archive, [{cwd, "'$out/lib'"}]), init:stop(0) ' + cp ${./rebar_ignore_deps.erl} rebar_ignore_deps.erl + erlc -o $out/lib/rebar/ebin rebar_ignore_deps.erl mkdir -p $out/bin makeWrapper ${erlang}/bin/erl $out/bin/rebar3 \ - --set REBAR_GLOBAL_PLUGINS "${toString globalPluginNames}" \ + --set REBAR_GLOBAL_PLUGINS "${toString globalPluginNames} rebar_ignore_deps" \ --suffix-each ERL_LIBS ":" "$out/lib ${toString pluginLibDirs}" \ --add-flags "+sbtu +A1 -noshell -boot start_clean -s rebar3 main -extra" ''; diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/rebar-deps.nix b/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/rebar-deps.nix index 6894b8666e..34c4821aae 100644 --- a/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/rebar-deps.nix +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/rebar-deps.nix @@ -1,54 +1,118 @@ # Generated by rebar3_nix -{ fetchHex, fetchFromGitHub }: -{ - ssl_verify_fun = fetchHex { - pkg = "ssl_verify_fun"; - version = "1.1.6"; - sha256 = "sha256-vbDSRx9FPIj/OQjnaG+G+b4yfQZcwewW+kVAGX6gRoA="; +let fetchOnly = { src, ... }: src; +in { builder ? fetchOnly, fetchHex, fetchFromGitHub, overrides ? (x: y: { }) }: +let + self = packages // (overrides self packages); + packages = with self; { + ssl_verify_fun = builder { + name = "ssl_verify_fun"; + version = "1.1.6"; + src = fetchHex { + pkg = "ssl_verify_fun"; + version = "1.1.6"; + sha256 = "sha256-vbDSRx9FPIj/OQjnaG+G+b4yfQZcwewW+kVAGX6gRoA="; + }; + beamDeps = [ ]; + }; + relx = builder { + name = "relx"; + version = "4.4.0"; + src = fetchHex { + pkg = "relx"; + version = "4.4.0"; + sha256 = "sha256-VcDtY7tdVeuYOhnrlNfzB1320Sbb3/QxAqZmCpH86SU="; + }; + beamDeps = [ bbmustache ]; + }; + providers = builder { + name = "providers"; + version = "1.8.1"; + src = fetchHex { + pkg = "providers"; + version = "1.8.1"; + sha256 = "sha256-5FdFrenEdqmkaeoIQOQYqxk2DcRPAaIzME4RikRIa6A="; + }; + beamDeps = [ getopt ]; + }; + getopt = builder { + name = "getopt"; + version = "1.0.1"; + src = fetchHex { + pkg = "getopt"; + version = "1.0.1"; + sha256 = "sha256-U+Grg7nOtlyWctPno1uAkum9ybPugHIUcaFhwQxZlZw="; + }; + beamDeps = [ ]; + }; + eunit_formatters = builder { + name = "eunit_formatters"; + version = "0.5.0"; + src = fetchHex { + pkg = "eunit_formatters"; + version = "0.5.0"; + sha256 = "sha256-1si6ITQklE5uBbvAl8MgAc3Qq+OSXQJFTyKbINaHY8k="; + }; + beamDeps = [ ]; + }; + erlware_commons = builder { + name = "erlware_commons"; + version = "1.5.0"; + src = fetchHex { + pkg = "erlware_commons"; + version = "1.5.0"; + sha256 = "sha256-PnxvsrpMKbDdXf6dAxtmRJ4giOzsGoFGW9n94F7X0Ns="; + }; + beamDeps = [ cf ]; + }; + cth_readable = builder { + name = "cth_readable"; + version = "1.5.1"; + src = fetchHex { + pkg = "cth_readable"; + version = "1.5.1"; + sha256 = "sha256-aGVBoi7+bKWkGgR7OVFsLdKPs8reXySi8ZFFs5Z/nYA="; + }; + beamDeps = [ cf ]; + }; + cf = builder { + name = "cf"; + version = "0.3.1"; + src = fetchHex { + pkg = "cf"; + version = "0.3.1"; + sha256 = "sha256-MV6NRH06SwK82/o5etA7u5iKbgqm9E063Q9OPDv5dnI="; + }; + beamDeps = [ ]; + }; + certifi = builder { + name = "certifi"; + version = "2.6.1"; + src = fetchHex { + pkg = "certifi"; + version = "2.6.1"; + sha256 = "sha256-UkyXtJkbOEndXBemMSI4licsawr0RneLpGdaHf9Tu34="; + }; + beamDeps = [ ]; + }; + bbmustache = builder { + name = "bbmustache"; + version = "1.10.0"; + src = fetchHex { + pkg = "bbmustache"; + version = "1.10.0"; + sha256 = "sha256-Q+/6P9S7lSMVevWp4idsSTSVuEWfyHNxRKoYbLE84u4="; + }; + beamDeps = [ ]; + }; + meck = builder { + name = "meck"; + version = "0.8.13"; + src = fetchHex { + pkg = "meck"; + version = "0.8.13"; + sha256 = "sha256-008BPBVttRrVfMVWiRuXIOahwd9f4uFa+ZnITWzr6xo="; + }; + beamDeps = [ ]; + }; }; - relx = fetchHex { - pkg = "relx"; - version = "4.4.0"; - sha256 = "sha256-VcDtY7tdVeuYOhnrlNfzB1320Sbb3/QxAqZmCpH86SU="; - }; - providers = fetchHex { - pkg = "providers"; - version = "1.8.1"; - sha256 = "sha256-5FdFrenEdqmkaeoIQOQYqxk2DcRPAaIzME4RikRIa6A="; - }; - getopt = fetchHex { - pkg = "getopt"; - version = "1.0.1"; - sha256 = "sha256-U+Grg7nOtlyWctPno1uAkum9ybPugHIUcaFhwQxZlZw="; - }; - eunit_formatters = fetchHex { - pkg = "eunit_formatters"; - version = "0.5.0"; - sha256 = "sha256-1si6ITQklE5uBbvAl8MgAc3Qq+OSXQJFTyKbINaHY8k="; - }; - erlware_commons = fetchHex { - pkg = "erlware_commons"; - version = "1.5.0"; - sha256 = "sha256-PnxvsrpMKbDdXf6dAxtmRJ4giOzsGoFGW9n94F7X0Ns="; - }; - cth_readable = fetchHex { - pkg = "cth_readable"; - version = "1.5.1"; - sha256 = "sha256-aGVBoi7+bKWkGgR7OVFsLdKPs8reXySi8ZFFs5Z/nYA="; - }; - cf = fetchHex { - pkg = "cf"; - version = "0.3.1"; - sha256 = "sha256-MV6NRH06SwK82/o5etA7u5iKbgqm9E063Q9OPDv5dnI="; - }; - certifi = fetchHex { - pkg = "certifi"; - version = "2.6.1"; - sha256 = "sha256-UkyXtJkbOEndXBemMSI4licsawr0RneLpGdaHf9Tu34="; - }; - bbmustache = fetchHex { - pkg = "bbmustache"; - version = "1.10.0"; - sha256 = "sha256-Q+/6P9S7lSMVevWp4idsSTSVuEWfyHNxRKoYbLE84u4="; - }; -} +in self diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/rebar_ignore_deps.erl b/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/rebar_ignore_deps.erl new file mode 100644 index 0000000000..3e0ae67c45 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/rebar3/rebar_ignore_deps.erl @@ -0,0 +1,43 @@ +%% This module, when loaded as a plugin, overrides the default `install_deps` +%% provider and erases the dependencies from the rebar3 state, when +%% REBAR_IGNORE_DEPS is true. + +-module(rebar_ignore_deps). + +-export([init/1, do/1, format_error/1]). + +init(State0) -> + case os:getenv("REBAR_IGNORE_DEPS", "") of + "" -> + {ok, State0}; + _ -> + do_init(State0) + end. + +do_init(State0) -> + State1 = rebar_state:allow_provider_overrides(State0, true), + Provider = providers:create( + [ + {name, install_deps}, %% override the default install_deps provider + {module, ?MODULE}, + {bare, false}, + {deps, [app_discovery]}, + {example, undefined}, + {opts, []}, + {short_desc, ""}, + {desc, ""} + ]), + State2 = rebar_state:add_provider(State1, Provider), + {ok, rebar_state:allow_provider_overrides(State2, false)}. + +do(State0) -> + io:format("Ignoring deps...~n"), + Profiles = rebar_state:current_profiles(State0), + State = lists:foldl(fun(P, Acc0) -> + Acc = rebar_state:set(Acc0, {deps, P}, []), + rebar_state:set(Acc, {parsed_deps, P}, []) + end, State0, Profiles), + {ok, State}. + +format_error(Reason) -> + io_lib:format("~p", [Reason]). diff --git a/third_party/nixpkgs/pkgs/development/tools/build-managers/sbt/default.nix b/third_party/nixpkgs/pkgs/development/tools/build-managers/sbt/default.nix index 7b9c6bca7e..677b31063a 100644 --- a/third_party/nixpkgs/pkgs/development/tools/build-managers/sbt/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/build-managers/sbt/default.nix @@ -8,11 +8,11 @@ stdenv.mkDerivation rec { pname = "sbt"; - version = "1.5.1"; + version = "1.5.4"; src = fetchurl { url = "https://github.com/sbt/sbt/releases/download/v${version}/sbt-${version}.tgz"; - sha256 = "0dsbqipr549awv584fyl227s1gknlpsf5krp990w7w3bbxl3avb7"; + sha256 = "035jl4czx9ixl12z874bksq5wxdnajxr06cl1yvfj2v92yx3l5wf"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/development/tools/buildah/default.nix b/third_party/nixpkgs/pkgs/development/tools/buildah/default.nix index 86aef4de9b..e3828eb7f1 100644 --- a/third_party/nixpkgs/pkgs/development/tools/buildah/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/buildah/default.nix @@ -14,13 +14,13 @@ buildGoModule rec { pname = "buildah"; - version = "1.21.0"; + version = "1.21.1"; src = fetchFromGitHub { owner = "containers"; repo = "buildah"; rev = "v${version}"; - sha256 = "sha256-uNb5HCEft1vXASli+2zdKWzFzsAlI9/ILBWa7OQZBwE="; + sha256 = "sha256-Wes52lTcv3Jb6gJeUS6fmf4Nee3qEcc3SibaTFvQ8sQ="; }; outputs = [ "out" "man" ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/butane/default.nix b/third_party/nixpkgs/pkgs/development/tools/butane/default.nix index fc42f311af..f417dc4203 100644 --- a/third_party/nixpkgs/pkgs/development/tools/butane/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/butane/default.nix @@ -4,13 +4,13 @@ with lib; buildGoModule rec { pname = "butane"; - version = "0.11.0"; + version = "0.12.1"; src = fetchFromGitHub { owner = "coreos"; repo = "butane"; rev = "v${version}"; - sha256 = "1s4rkq7mj1lyi8h47jyfy3qygfxhrmpihdy8rcnn55gcy04lm0qc"; + sha256 = "1bgh7h3hwrgjkw72233qzqpkshzbizhdapa0lalzj1xnclq3rqlp"; }; vendorSha256 = null; diff --git a/third_party/nixpkgs/pkgs/development/tools/clang-tools/wrapper b/third_party/nixpkgs/pkgs/development/tools/clang-tools/wrapper index eebc152d11..1008023fdc 100755 --- a/third_party/nixpkgs/pkgs/development/tools/clang-tools/wrapper +++ b/third_party/nixpkgs/pkgs/development/tools/clang-tools/wrapper @@ -19,9 +19,9 @@ buildcpath() { } export CPATH=${CPATH}${CPATH:+':'}$(buildcpath ${NIX_CFLAGS_COMPILE} \ - $(<@clang@/nix-support/libc-cflags)) + $(<@clang@/nix-support/libc-cflags)):@clang@/resource-root/include export CPLUS_INCLUDE_PATH=${CPLUS_INCLUDE_PATH}${CPLUS_INCLUDE_PATH:+':'}$(buildcpath ${NIX_CFLAGS_COMPILE} \ $(<@clang@/nix-support/libcxx-cxxflags) \ - $(<@clang@/nix-support/libc-cflags)) + $(<@clang@/nix-support/libc-cflags)):@clang@/resource-root/include exec -a "$0" @unwrapped@/bin/$(basename $0) "$@" diff --git a/third_party/nixpkgs/pkgs/development/tools/continuous-integration/drone/default.nix b/third_party/nixpkgs/pkgs/development/tools/continuous-integration/drone/default.nix index a2bc47b640..c6d1e47389 100644 --- a/third_party/nixpkgs/pkgs/development/tools/continuous-integration/drone/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/continuous-integration/drone/default.nix @@ -3,9 +3,9 @@ buildGoModule rec { pname = "drone.io${lib.optionalString (!enableUnfree) "-oss"}"; - version = "1.10.0"; + version = "2.0.0"; - vendorSha256 = "sha256-cKHX/GnvGELQBfoo0/1UmDQ4Z66GGnnHG7+1CzjinL0="; + vendorSha256 = "sha256-cnbZSnHU+ORm7/dV+U9NfM18Zrzi24vf7qITPJsusU8="; doCheck = false; @@ -13,7 +13,7 @@ buildGoModule rec { owner = "drone"; repo = "drone"; rev = "v${version}"; - sha256 = "sha256-12Jac+mXWdUX8gWvmpdO9ROv7Bi0YzvyqnNDVNJOr34="; + sha256 = "sha256-BxwCJf3uY34rqegZJ6H/zb63orELhq41trOgzGXQe80="; }; preBuild = '' diff --git a/third_party/nixpkgs/pkgs/development/tools/continuous-integration/fly/default.nix b/third_party/nixpkgs/pkgs/development/tools/continuous-integration/fly/default.nix index a4769b10b3..22b7752c59 100644 --- a/third_party/nixpkgs/pkgs/development/tools/continuous-integration/fly/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/continuous-integration/fly/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "fly"; - version = "7.3.1"; + version = "7.3.2"; src = fetchFromGitHub { owner = "concourse"; repo = "concourse"; rev = "v${version}"; - sha256 = "sha256-JtzJDbln+n05oJjA/ydZWaH4dIPLL/ZsNg+Gr+YBcng="; + sha256 = "sha256-ID/vqkFzKHLeuojHUxUFYURn+Dxb78XwxfJVV+S130A="; }; vendorSha256 = "sha256-30rrRkPIH0sr8koKRLs1Twe6Z55+lr9gkgUDrY+WOTw="; diff --git a/third_party/nixpkgs/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix b/third_party/nixpkgs/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix index ce3264e1ad..e89c784df7 100644 --- a/third_party/nixpkgs/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/continuous-integration/gitlab-runner/default.nix @@ -1,16 +1,16 @@ { lib, buildGoPackage, fetchFromGitLab, fetchurl }: let - version = "13.12.0"; + version = "14.0.1"; # Gitlab runner embeds some docker images these are prebuilt for arm and x86_64 docker_x86_64 = fetchurl { - url = "https://gitlab-runner-downloads.s3.amazonaws.com/v${version}/helper-images/prebuilt-x86_64.tar.xz"; - sha256 = "0m0r295520jy45wn8jw3jzhiixl4c6yrfx7gvgbd4c1v4y8ivrci"; + url = "https://gitlab-runner-downloads.s3.amazonaws.com/v${version}/binaries/gitlab-runner-helper/gitlab-runner-helper.x86_64"; + sha256 = "1i1fddsz7cr0kg4bxqisx29cwyd07zqfbpmh5mhvi5zqy0gfmcn8"; }; docker_arm = fetchurl { - url = "https://gitlab-runner-downloads.s3.amazonaws.com/v${version}/helper-images/prebuilt-arm.tar.xz"; - sha256 = "0syfggplp19bbmhhpyc17h0f1dii9hc6n04q483l0xdk7sv39fwx"; + url = "https://gitlab-runner-downloads.s3.amazonaws.com/v${version}/binaries/gitlab-runner-helper/gitlab-runner-helper.arm"; + sha256 = "1d2ywc3cikffiwpql2kp5zg21vjinz51f76c6wdn0v35wl705fz4"; }; in buildGoPackage rec { @@ -30,7 +30,7 @@ buildGoPackage rec { owner = "gitlab-org"; repo = "gitlab-runner"; rev = "v${version}"; - sha256 = "01ajl7zka5fnph5zcnp3z6ir8xr81wzkam69gxazwjb3nbs642an"; + sha256 = "1prvmppq5w897bd9ch5z0h6h8mndy6myv8al24cr0bjc27c6wyn7"; }; patches = [ ./fix-shell-path.patch ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/database/liquibase/default.nix b/third_party/nixpkgs/pkgs/development/tools/database/liquibase/default.nix index c4393821b7..4bf0ab7b56 100644 --- a/third_party/nixpkgs/pkgs/development/tools/database/liquibase/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/database/liquibase/default.nix @@ -10,11 +10,11 @@ in stdenv.mkDerivation rec { pname = "liquibase"; - version = "4.3.5"; + version = "4.4.0"; src = fetchurl { url = "https://github.com/liquibase/liquibase/releases/download/v${version}/${pname}-${version}.tar.gz"; - sha256 = "sha256-XOYq+p76XFt7j4oxMClZox5wsaXuV5ovcB6kZJhMBlU="; + sha256 = "sha256-iqWQAZV1H3p9Ud+6U2RwIpfFlsu+7SE96Abh3u8CCVs="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/database/litecli/default.nix b/third_party/nixpkgs/pkgs/development/tools/database/litecli/default.nix index ee18a72216..75e600ccb5 100644 --- a/third_party/nixpkgs/pkgs/development/tools/database/litecli/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/database/litecli/default.nix @@ -1,16 +1,15 @@ -{ lib, python3Packages }: +{ lib +, python3Packages +}: python3Packages.buildPythonApplication rec { pname = "litecli"; - version = "1.5.0"; - - # Python 2 won't have prompt_toolkit 2.x.x - # See: https://github.com/NixOS/nixpkgs/blob/f49e2ad3657dede09dc998a4a98fd5033fb52243/pkgs/top-level/python-packages.nix#L3408 - disabled = python3Packages.isPy27; + version = "1.6.0"; + disabled = python3Packages.pythonOlder "3.4"; src = python3Packages.fetchPypi { inherit pname version; - sha256 = "b09f0804d26b018360b240778612390810e8e00ea0f79d5412fd0d4775c0e3cd"; + sha256 = "sha256-TSdOFHW007syOEg4gwvEqDiJkrfLgRmqjP/H/6oBZ/k="; }; propagatedBuildInputs = with python3Packages; [ @@ -27,6 +26,8 @@ python3Packages.buildPythonApplication rec { mock ]; + pythonImportsCheck = [ "litecli" ]; + meta = with lib; { description = "Command-line interface for SQLite"; longDescription = '' diff --git a/third_party/nixpkgs/pkgs/development/tools/database/litestream/default.nix b/third_party/nixpkgs/pkgs/development/tools/database/litestream/default.nix new file mode 100644 index 0000000000..3f70f39da9 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/database/litestream/default.nix @@ -0,0 +1,30 @@ +{ buildGoModule +, fetchFromGitHub +, lib +}: +buildGoModule rec { + pname = "litestream"; + version = "0.3.5"; + + src = fetchFromGitHub { + owner = "benbjohnson"; + repo = pname; + rev = "v${version}"; + sha256 = "sha256-OQ8j0FOUWU5TfCl4AZpmX5tuhtHAbrhvzT6ve6AJNn0="; + }; + + ldflags = [ + "-s" + "-w" + "-X main.Version=${version}" + ]; + + vendorSha256 = "sha256-ScG8cukUuChOvN9r0HvVJsYnu1X9DSO7aD32iu55jIM="; + + meta = with lib; { + description = "Streaming replication for SQLite"; + license = licenses.asl20; + homepage = "https://litestream.io/"; + maintainers = with maintainers; [ fbrs ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/tools/database/sqlfluff/default.nix b/third_party/nixpkgs/pkgs/development/tools/database/sqlfluff/default.nix new file mode 100644 index 0000000000..01f4941c8e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/database/sqlfluff/default.nix @@ -0,0 +1,65 @@ +{ lib +, fetchFromGitHub +, python3 +}: + +python3.pkgs.buildPythonApplication rec { + pname = "sqlfluff"; + version = "0.6.0a2"; + disabled = python3.pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = pname; + repo = pname; + rev = version; + sha256 = "13hzr0jialzi2nlvqwvff3w0h6jikqvcg0p2p4irwlisg4db8w7w"; + }; + + propagatedBuildInputs = with python3.pkgs; [ + appdirs + cached-property + click + colorama + configparser + diff_cover + jinja2 + oyaml + pathspec + pytest + tblib + toml + ] ++ lib.optionals (pythonOlder "3.7") [ + dataclasses + ] ++ lib.optionals (pythonOlder "3.9") [ + typing-extensions + ]; + + checkInputs = with python3.pkgs; [ + hypothesis + pytestCheckHook + ]; + + disabledTestPaths = [ + # dbt is not available yet + "test/core/templaters/dbt_test.py" + # Don't run the plugin related tests + "test/core/plugin_test.py" + "plugins/sqlfluff-plugin-example/test/rules/rule_test_cases_test.py" + ]; + + disabledTests = [ + # dbt is not available yet + "test__linter__skip_dbt_model_disabled" + "test_rules__test_helper_has_variable_introspection" + "test__rules__std_file_dbt" + ]; + + pythonImportsCheck = [ "sqlfluff" ]; + + meta = with lib; { + description = "SQL linter and auto-formatter"; + homepage = "https://www.sqlfluff.com/"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/tools/database/sqlitebrowser/default.nix b/third_party/nixpkgs/pkgs/development/tools/database/sqlitebrowser/default.nix index 40238d0eff..45b5f18588 100644 --- a/third_party/nixpkgs/pkgs/development/tools/database/sqlitebrowser/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/database/sqlitebrowser/default.nix @@ -1,4 +1,4 @@ -{ mkDerivation, lib, fetchFromGitHub, cmake, antlr +{ mkDerivation, lib, fetchFromGitHub, cmake , qtbase, qttools, sqlite }: mkDerivation rec { @@ -16,7 +16,7 @@ mkDerivation rec { # but qscintilla is currently in a bit of a mess as some consumers expect a # -qt4 or -qt5 prefix while others do not. # We *really* should get that cleaned up. - buildInputs = [ antlr qtbase sqlite ]; + buildInputs = [ qtbase sqlite ]; nativeBuildInputs = [ cmake qttools ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/dockle/default.nix b/third_party/nixpkgs/pkgs/development/tools/dockle/default.nix index f0d8a5ac6e..437f7f2da5 100644 --- a/third_party/nixpkgs/pkgs/development/tools/dockle/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/dockle/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "dockle"; - version = "0.3.13"; + version = "0.3.15"; src = fetchFromGitHub { owner = "goodwithtech"; repo = pname; rev = "v${version}"; - sha256 = "sha256-U0nIGuQ4QjBaCck0Kg1RTS2IQwfivN3VI5vxh8lxAYE="; + sha256 = "sha256-jxFlbGJ95cSv08HcqrVufpTE5KkvAC9zOTQ2+JZWe5A="; }; - vendorSha256 = "sha256-uHHm4AgnjTdPgpu3OpXXIRzrGhkpOoRY8qynfl7DO6w="; + vendorSha256 = "sha256-h+2AcppNUJ7zjHeBzDy1iWoR3i7a2v0Pc7vOfoUqPOw="; nativeBuildInputs = [ pkg-config ]; buildInputs = [ btrfs-progs lvm2 ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/documentation/mkdocs/default.nix b/third_party/nixpkgs/pkgs/development/tools/documentation/mkdocs/default.nix index 64d834f1bb..f7774cc712 100644 --- a/third_party/nixpkgs/pkgs/development/tools/documentation/mkdocs/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/documentation/mkdocs/default.nix @@ -1,40 +1,55 @@ -{ lib, python3, fetchFromGitHub }: +{ lib +, python3 +, fetchFromGitHub +}: with python3.pkgs; buildPythonApplication rec { pname = "mkdocs"; - version = "1.0.4"; + version = "1.2.1"; + disabled = pythonOlder "3.6"; src = fetchFromGitHub { - owner = "mkdocs"; - repo = "mkdocs"; + owner = pname; + repo = pname; rev = version; - sha256 = "1x35vgiskgz4wwrvi4m1mri5wlphf15p90fr3rxsy5bf19v3s9hs"; + sha256 = "sha256-JF3Zz1ObxeKsIF0pa8duJxqjLgMvmWsWMApHT43Z+EY="; }; - checkInputs = [ - nose nose-exclude mock - ]; - - NOSE_EXCLUDE_TESTS = lib.concatStringsSep ";" [ - "mkdocs.tests.gh_deploy_tests.TestGitHubDeploy" - "mkdocs.tests.config.config_tests.ConfigTests" - "mkdocs.tests.config.config_options_tests.DirTest" - ]; - - checkPhase = "nosetests mkdocs"; - propagatedBuildInputs = [ - tornado - livereload click - pyyaml - markdown jinja2 - backports_tempfile + markdown + mergedeep + pyyaml + pyyaml-env-tag + ghp-import + importlib-metadata + watchdog + packaging ]; + checkInputs = [ + Babel + mock + pytestCheckHook + ]; + + postPatch = '' + # Remove test due to missing requirement + rm mkdocs/tests/theme_tests.py + ''; + + pytestFlagsArray = [ "mkdocs/tests/*.py" ]; + + disabledTests = [ + # Don't start a test server + "testing_server" + ]; + + pythonImportsCheck = [ "mkdocs" ]; + meta = with lib; { description = "Project documentation with Markdown / static website generator"; longDescription = '' @@ -42,11 +57,11 @@ buildPythonApplication rec { geared towards building project documentation. Documentation source files are written in Markdown, and configured with a single YAML configuration file. - MkDocs can also be used to generate general-purpose Websites. + MkDocs can also be used to generate general-purpose websites. ''; homepage = "http://mkdocs.org/"; - license = lib.licenses.bsd2; + license = licenses.bsd2; platforms = platforms.unix; - maintainers = [ maintainers.rkoe ]; + maintainers = with maintainers; [ rkoe ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/tools/earthly/default.nix b/third_party/nixpkgs/pkgs/development/tools/earthly/default.nix index f73de077ac..b46a97df20 100644 --- a/third_party/nixpkgs/pkgs/development/tools/earthly/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/earthly/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "earthly"; - version = "0.5.14"; + version = "0.5.17"; src = fetchFromGitHub { owner = "earthly"; repo = "earthly"; rev = "v${version}"; - sha256 = "sha256-XB3zfbcuEgkqQ7DGnyUJj3K+qUH2DNv3n1/0mlocqfM="; + sha256 = "sha256-SuHHeO2KFjB3HbLv1ODBGaXzNaDi/FNPOGg/lX8JLJE="; }; - vendorSha256 = "sha256-q3dDV0eop2NxXHFrlppWsZrO2Hz1q5xhs1DnB6PvG9g="; + vendorSha256 = "sha256-D62fG+T3G1W7xteSGlTtEkXbQfGAmBTYJeATH2CVtwY="; buildFlagsArray = '' -ldflags= diff --git a/third_party/nixpkgs/pkgs/development/tools/efm-langserver/default.nix b/third_party/nixpkgs/pkgs/development/tools/efm-langserver/default.nix new file mode 100644 index 0000000000..f42ae929af --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/efm-langserver/default.nix @@ -0,0 +1,23 @@ +{ lib, buildGoModule, fetchFromGitHub }: + +buildGoModule rec { + pname = "efm-langserver"; + version = "0.0.31"; + + src = fetchFromGitHub { + owner = "mattn"; + repo = "efm-langserver"; + rev = "v${version}"; + sha256 = "sha256-4NdD+WwvlqfJdPqXTz9LUyriJyLPppi8jH6dxYupe6A="; + }; + + vendorSha256 = "sha256-tca+1SRrFyvU8ttHmfMFiGXd1A8rQSEWm1Mc2qp0EfI="; + subPackages = [ "." ]; + + meta = with lib; { + description = "General purpose Language Server"; + maintainers = with maintainers; [ Philipp-M ]; + homepage = "https://github.com/mattn/efm-langserver"; + license = licenses.mit; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/tools/electron/default.nix b/third_party/nixpkgs/pkgs/development/tools/electron/default.nix index e3cd9d2cf9..ebcfcf1c55 100644 --- a/third_party/nixpkgs/pkgs/development/tools/electron/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/electron/default.nix @@ -95,33 +95,33 @@ rec { headers = "01x6a0r2jawjpl09ixgzap3g0z6znj34hsnnhzanavkbds0ri4k6"; }; - electron_11 = mkElectron "11.4.7" { - x86_64-linux = "05005d351a1b08a550a8186efba6f4fdd96842355a634934d9a9d7d31c2cd539"; - x86_64-darwin = "e6445ad3d7e851fc3227785788d0706d58c9c8ea3821afa7f871c6254c463043"; - i686-linux = "5473f36eb2a9772da7e4f1a162a724b4a5335e8f78fb51d585bac3bd50ff12fc"; - armv7l-linux = "0de0d74b1206f7ffd9e4c75754bbf6fdf27c83a0ce6b4cd8a6b5af81d7a20ba7"; - aarch64-linux = "f2261dde71197c358aff85d7a320cbd2315a5adf228218fd9a2f5c8561589323"; - aarch64-darwin = "a2abc83c21402e30f4f42f4615cccc4369884faa2f2fa576d71f423834988622"; - headers = "1dqkx861vfq6xbzdlbgza6h4j7bib8p3xahllrnfc0s65y8gf0ry"; + electron_11 = mkElectron "11.4.9" { + x86_64-linux = "c18ed2e16e60ca1eddd01ab2e4fff2bbfd9f197ab17b7577155f05687297d7be"; + x86_64-darwin = "ec34759ae768e55449c23244283c8af3dc5d5ab533d64cea0231be0a0878ebdd"; + i686-linux = "ef9125268e03f2f1d13c2b2505ba2529af88a8397cad640bd35116caae7ab296"; + armv7l-linux = "b43c00f4a0b4cf8affa09cedff93066d23d57a6148af383a8fc9f6d25b63d449"; + aarch64-linux = "3df038538056fc4a918afe07138052b1f53648c411add47c3a18abe8a30e6f71"; + aarch64-darwin = "acf880cfaea9ca382831df165fa7ef7e0b442c663d5a586cdfe0baa1aea4e17c"; + headers = "1wfhc22g680pvv85rq8d8lw4vphpr700fmzs3nwxixxnzhp1sb79"; }; - electron_12 = mkElectron "12.0.9" { - x86_64-linux = "3ab0a873f720d3bf56cce6ca1bf9d8b956843920798f659ca0829e4cc3126f6d"; - x86_64-darwin = "b3f1e378f58e7c36b54451c5a3485adc370277827974e1eb0790b6965737c872"; - i686-linux = "37405b3b27779ad417c3ae432d7f0d969c126c958a0ad8f2585c34fc8ee6c6e6"; - armv7l-linux = "2d41ef3ed6a215efe2c7d03d8055fcfda0079f09e9580e5bf70e8ac4a22b0898"; - aarch64-linux = "22a85817ea2edbba2e17b35f6e3a8104b2165e070ea21a1f2fa3b40e8d7aecc9"; - aarch64-darwin = "cb8aa8153005ea0d801182eb714d56af0217345b1152d867317291670731daeb"; - headers = "1vwcjzkjag2wxrwnsbi8bgbv8bi6vn5iq9b04krwlk7mlhm4ax66"; + electron_12 = mkElectron "12.0.12" { + x86_64-linux = "98e7cc5dd3f161c37cbbd9aef90d55c51531a4bad8221a9d1f92e78014758054"; + x86_64-darwin = "3a39933c1c83406e4ddbce2af193e9a6b7b77f418c4f1d5e7b8f9edc348acd15"; + i686-linux = "2a06936fa13929342ebb7521d2e3e8b4a7a08ac1d757c0521a047b4cf0a979fc"; + armv7l-linux = "c0a2c13d99a1152aa6252fd8237207a6f395b70d0890eba5b7209a03beb9a6ec"; + aarch64-linux = "a92e2eaebab75b93eda0bc523ba9262a32db95c7546c095fee93d39a304521a0"; + aarch64-darwin = "810a1f36574a2db8d7d4022a042a65cceec3443644487868c5609b16b5dfe29f"; + headers = "1qis2k8yc7g1klvhiysjrgl5gclx4idxdz60kh8ldrji5a0lgha1"; }; - electron_13 = mkElectron "13.0.1" { - x86_64-linux = "05c6cfc2804d426d6c2af15cc16e0265782917e76fb2c4e87b7469d0f3ab0f81"; - x86_64-darwin = "a65a44bfafcdfcdee0bb2b3515dab57e884e0700830ccd142e15f01e6c3a4976"; - i686-linux = "3f3b358879523b10e6341a5c74842f8c09a1073f6064410f3495143733663f8d"; - armv7l-linux = "b6657862bf4b1f61f5c1e0c836401f82822fc5ebd69ecb2efd0777255fefc813"; - aarch64-linux = "ccc581dc5ddf9d2adefb60d8bc495b5a04363a80614d617094c142b8c5aa95de"; - aarch64-darwin = "e58e3ea3fffc8c3b280b0b6c22c685f9ecd82ef0340a5207d8b9c6f20e7c0197"; - headers = "0idlap698vqz7i2by3g9k4yqhm87fqc34pgzxcidzan9qvyd0njx"; + electron_13 = mkElectron "13.1.4" { + x86_64-linux = "096909396be9fac888ca35093d16bdb50a965e3200823f2384574c359f15cd4f"; + x86_64-darwin = "3d9980f8062766be3cfcfd54b9fd9f469993df06d538a2324c4879eae1284c84"; + i686-linux = "73c8b1fc01a89a5f9b12de38ed70bd01686e50a55d817f0cdf5914e953bdc868"; + armv7l-linux = "db2fe2f499865ea697cacef992fc0042ac0f75da4c016d64e5c41deae7f5eb72"; + aarch64-linux = "4acdd4eae499e1ed42871ed8b744fdef9f608f5613742090cc20e4f6b5314ae8"; + aarch64-darwin = "e961b7d361c378e4adab7903211ac7200684cb91044c3b300acde04ca24d0468"; + headers = "1h1sr5nk37asbj1fadgjzksgr876wxdmq3b017bb9k5kcgajcmqr"; }; } diff --git a/third_party/nixpkgs/pkgs/development/tools/esbuild/default.nix b/third_party/nixpkgs/pkgs/development/tools/esbuild/default.nix index 2aa6748333..22a6a59cc1 100644 --- a/third_party/nixpkgs/pkgs/development/tools/esbuild/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/esbuild/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "esbuild"; - version = "0.12.6"; + version = "0.12.9"; src = fetchFromGitHub { owner = "evanw"; repo = "esbuild"; rev = "v${version}"; - sha256 = "sha256-ncRHsYxG4XVT7TUJv+VgXMsLmQ52+/dXUlgMy8QnzNc="; + sha256 = "sha256-MqwgdhgWIfYE0wO7fWQuC72tEwCVgL7qUbJlJ3APf4E="; }; vendorSha256 = "sha256-2ABWPqhK2Cf4ipQH7XvRrd+ZscJhYPc3SV2cGT0apdg="; diff --git a/third_party/nixpkgs/pkgs/development/tools/fission/default.nix b/third_party/nixpkgs/pkgs/development/tools/fission/default.nix index 133db2d9ff..3045842d91 100644 --- a/third_party/nixpkgs/pkgs/development/tools/fission/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/fission/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "fission"; - version = "1.12.0"; + version = "1.13.0"; src = fetchFromGitHub { owner = "fission"; repo = "fission"; rev = version; - sha256 = "0izvkjd7ydcxhr6zmgrbfm3ybz2kf4p27099lr07gd4x7c6xxmqr"; + sha256 = "sha256-WCynU5+d789d584JH99jmTZSEbyco2ysuBXIC2pW1r4="; }; - vendorSha256 = "12clw0wy4lypf45imqnabj39yxqpi348csr4m5d0d1rksxgvwngq"; + vendorSha256 = "sha256-V3/IFCbW3wXfNiFzucLeyFDc6SA2nE+NwO0sNEBmIYg="; buildFlagsArray = "-ldflags=-s -w -X info.Version=${version}"; diff --git a/third_party/nixpkgs/pkgs/development/tools/flatpak-builder/default.nix b/third_party/nixpkgs/pkgs/development/tools/flatpak-builder/default.nix index 75aa8a00f0..cc1a46c834 100644 --- a/third_party/nixpkgs/pkgs/development/tools/flatpak-builder/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/flatpak-builder/default.nix @@ -46,13 +46,13 @@ let installed_test_metadir = "${placeholder "installedTests"}/share/installed-tests/flatpak-builder"; in stdenv.mkDerivation rec { pname = "flatpak-builder"; - version = "1.0.12"; + version = "1.0.14"; outputs = [ "out" "doc" "man" "installedTests" ]; src = fetchurl { url = "https://github.com/flatpak/flatpak-builder/releases/download/${version}/${pname}-${version}.tar.xz"; - sha256 = "sha256-R4DBuOCDj/tk6WOb14AUF5ZP2BjHxtXpr8pNVRHe0sg="; + sha256 = "sha256-abZa9PY4BBJ1GMVFGE+d/JqTWM3tqr7yseUGI64rjYs="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/development/tools/flawfinder/default.nix b/third_party/nixpkgs/pkgs/development/tools/flawfinder/default.nix index 28805b4abe..554ca92b8c 100644 --- a/third_party/nixpkgs/pkgs/development/tools/flawfinder/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/flawfinder/default.nix @@ -31,5 +31,6 @@ stdenv.mkDerivation rec { homepage = "https://dwheeler.com/flawfinder/"; license = with licenses; [ gpl2Only ]; maintainers = with maintainers; [ fab ]; + platforms = platforms.all; }; } diff --git a/third_party/nixpkgs/pkgs/development/tools/flip-link/default.nix b/third_party/nixpkgs/pkgs/development/tools/flip-link/default.nix index 697e4fb353..6e752379a7 100644 --- a/third_party/nixpkgs/pkgs/development/tools/flip-link/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/flip-link/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "flip-link"; - version = "0.1.3"; + version = "0.1.4"; src = fetchFromGitHub { owner = "knurling-rs"; repo = pname; rev = "v${version}"; - sha256 = "0x6l5aps0aryf3iqiyk969zrq77bm95jvm6f0f5vqqqizxjd3yfl"; + sha256 = "sha256-LE0cWS6sOb9/VvGloezNnePHGldnpfNTdCFUv3F/nwE="; }; - cargoSha256 = "13rgpbwaz2b928rg15lbaszzjymph54pwingxpszp5paihx4iayr"; + cargoSha256 = "sha256-8WBMF5stMB4JXvYwa5yHVFV+3utDuMFJNTZ4fZFDftw="; buildInputs = lib.optional stdenv.isDarwin libiconv; diff --git a/third_party/nixpkgs/pkgs/development/tools/frugal/default.nix b/third_party/nixpkgs/pkgs/development/tools/frugal/default.nix index c8339fe6d8..0b1e8d16b6 100644 --- a/third_party/nixpkgs/pkgs/development/tools/frugal/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/frugal/default.nix @@ -2,18 +2,18 @@ buildGoModule rec { pname = "frugal"; - version = "3.14.4"; + version = "3.14.5"; src = fetchFromGitHub { owner = "Workiva"; repo = pname; rev = "v${version}"; - sha256 = "sha256-RFVn5aL5MqsB7heDPVUci3Eyq6F/qo3RmdEaZbsC+Ng="; + sha256 = "sha256-Er9V6mSe4Pt/RzFAPa3ci3J7FQh5GLbh9CjYHx/HnYM="; }; subPackages = [ "." ]; - vendorSha256 = "sha256-hyupBMRKuw77SJNIk3mEUixV0LV5mEmZx8M70qGmYJY="; + vendorSha256 = "sha256-9M6SSxMQ8JMJ7ZNl8cjQuid/B0xc28/BuPozxftthe0="; meta = with lib; { description = "Thrift improved"; diff --git a/third_party/nixpkgs/pkgs/development/tools/gamecube-tools/default.nix b/third_party/nixpkgs/pkgs/development/tools/gamecube-tools/default.nix index 2f7c088cd4..d7715d67ac 100644 --- a/third_party/nixpkgs/pkgs/development/tools/gamecube-tools/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/gamecube-tools/default.nix @@ -2,7 +2,7 @@ , freeimage, libGL }: stdenv.mkDerivation rec { - version = "1.0.2"; + version = "1.0.4"; pname = "gamecube-tools"; nativeBuildInputs = [ autoreconfHook ]; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { owner = "devkitPro"; repo = "gamecube-tools"; rev = "v${version}"; - sha256 = "0zvpkzqvl8iv4ndzhkjkmrzpampyzgb91spv0h2x2arl8zy4z7ca"; + sha256 = "sha256-0iMY2LokfsYgHzIuFc8RlrVlJCURqVqprP54PG4oW0M="; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/tools/ginkgo/default.nix b/third_party/nixpkgs/pkgs/development/tools/ginkgo/default.nix index 833f87e4a0..4bc550165c 100644 --- a/third_party/nixpkgs/pkgs/development/tools/ginkgo/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/ginkgo/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "ginkgo"; - version = "1.16.2"; + version = "1.16.4"; src = fetchFromGitHub { owner = "onsi"; repo = "ginkgo"; rev = "v${version}"; - sha256 = "sha256-u2roJsZZ5oG2dHo4kmSsoySjm1HRQJ659+D2M+LezCc="; + sha256 = "sha256-p9kam1pRP0Am02o7vM+VzeAht+Qtn4DZ12NM8TaA/2Y="; }; vendorSha256 = "sha256-tS8YCGVOsfQp02vY6brmE3pxi70GG9DYcp1JDkcVG9Y="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/tools/git-quick-stats/default.nix b/third_party/nixpkgs/pkgs/development/tools/git-quick-stats/default.nix index 548fca369b..db9aba705c 100644 --- a/third_party/nixpkgs/pkgs/development/tools/git-quick-stats/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/git-quick-stats/default.nix @@ -11,13 +11,13 @@ stdenv.mkDerivation rec { pname = "git-quick-stats"; - version = "2.2.0"; + version = "2.3.0"; src = fetchFromGitHub { repo = "git-quick-stats"; owner = "arzzen"; rev = version; - sha256 = "sha256-cE9eo8FUUNlhmBrHalFDTFK2LIQUaWFy7Gj/E2F15t4="; + sha256 = "sha256-uioL4ysioxo+YMCa3VPoUMpY1cVZJ0Jljt8d9jWRT9k="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/go-minimock/default.nix b/third_party/nixpkgs/pkgs/development/tools/go-minimock/default.nix index 3131fc59b4..60f53e1e25 100644 --- a/third_party/nixpkgs/pkgs/development/tools/go-minimock/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/go-minimock/default.nix @@ -2,20 +2,20 @@ buildGoModule rec { pname = "go-minimock"; - version = "3.0.8"; + version = "3.0.9"; src = fetchFromGitHub { owner = "gojuno"; repo = "minimock"; rev = "v${version}"; - sha256 = "0r0krbwvx5w1z0yv2qqi92irbsfhkvwvaigy350cvcz9gmcppj4h"; + sha256 = "sha256-l+ngvmTb9yVgQYT+OeaVd0zz/xNZeXWrjMpVkMpbQIw="; }; buildFlagsArray = [ "-ldflags=-s -w -X main.version=${version}" ]; - vendorSha256 = "1macwm6hybjinwnx62v146yxydcn5k5r587nxwkf4ffy76s2m3jc"; + vendorSha256 = "sha256-hn222ifKRYbASAHBJyMTCDwhykf2Jg9IqIUlK/GabJA="; doCheck = true; diff --git a/third_party/nixpkgs/pkgs/development/tools/go-mockery/default.nix b/third_party/nixpkgs/pkgs/development/tools/go-mockery/default.nix index 347bfeb116..598ee15a5f 100644 --- a/third_party/nixpkgs/pkgs/development/tools/go-mockery/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/go-mockery/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "go-mockery"; - version = "2.8.0"; + version = "2.9.0"; src = fetchFromGitHub { owner = "vektra"; repo = "mockery"; rev = "v${version}"; - sha256 = "sha256-sOZig47KKKGJmV9QNCa+TwYCxemeVl6xssfExSaaFjY="; + sha256 = "sha256-lR4EhFddP+ae1xpRW82w53yNoBG4RpMHk8w4XFGcli8="; }; vendorSha256 = "sha256-//V3ia3YP1hPgC1ipScURZ5uXU4A2keoG6dGuwaPBcA="; diff --git a/third_party/nixpkgs/pkgs/development/tools/go-toml/default.nix b/third_party/nixpkgs/pkgs/development/tools/go-toml/default.nix index 355f468237..8a41e0a4d1 100644 --- a/third_party/nixpkgs/pkgs/development/tools/go-toml/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/go-toml/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { pname = "go-toml"; - version = "1.9.1"; + version = "1.9.3"; src = fetchFromGitHub { owner = "pelletier"; repo = pname; rev = "v${version}"; - sha256 = "sha256-O3gfQon8ktObLVED4A5sCSOw8K1NIXP3a5AsLq3Svb4="; + sha256 = "sha256-Vu/PS01JeSeg1KHkpqL12rTjRJFoc9rla48H/ei2HDM="; }; goPackagePath = "github.com/pelletier/go-toml"; diff --git a/third_party/nixpkgs/pkgs/development/tools/godot/default.nix b/third_party/nixpkgs/pkgs/development/tools/godot/default.nix index 3a210ab174..5e457227c8 100644 --- a/third_party/nixpkgs/pkgs/development/tools/godot/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/godot/default.nix @@ -1,7 +1,7 @@ { stdenv, lib, fetchFromGitHub, scons, pkg-config, udev, libX11 , libXcursor , libXinerama, libXrandr, libXrender, libpulseaudio , libXi, libXext, libXfixes, freetype, openssl -, alsaLib, libGLU, zlib, yasm +, alsa-lib, libGLU, zlib, yasm , withUdev ? true }: @@ -25,7 +25,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; buildInputs = [ scons udev libX11 libXcursor libXinerama libXrandr libXrender - libXi libXext libXfixes freetype openssl alsaLib libpulseaudio + libXi libXext libXfixes freetype openssl alsa-lib libpulseaudio libGLU zlib yasm ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/golangci-lint/default.nix b/third_party/nixpkgs/pkgs/development/tools/golangci-lint/default.nix index 2019c7cb3e..32af811c00 100644 --- a/third_party/nixpkgs/pkgs/development/tools/golangci-lint/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/golangci-lint/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "golangci-lint"; - version = "1.40.1"; + version = "1.41.1"; src = fetchFromGitHub { owner = "golangci"; repo = "golangci-lint"; rev = "v${version}"; - sha256 = "sha256-5OtXfDPpdwVMnI5Pttr+XQPgJXI7YexPtBhIDeS1CXk="; + sha256 = "sha256-7xokU2uw7oiXhirTKuNfqJ143PlnI7M1zSixT0S6jtE="; }; - vendorSha256 = "sha256-8SPUOQ88RkU0dkyNccf+POKitXHlCRaxrIugV91gDZQ="; + vendorSha256 = "sha256-s0ZFQJIhF23FtLol1Gegljf6eyGkCmVxTKmHbQBtPvM="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/tools/gosec/default.nix b/third_party/nixpkgs/pkgs/development/tools/gosec/default.nix index a24ec10501..9264ac27fa 100644 --- a/third_party/nixpkgs/pkgs/development/tools/gosec/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/gosec/default.nix @@ -2,7 +2,7 @@ buildGoModule rec { pname = "gosec"; - version = "2.8.0"; + version = "2.8.1"; subPackages = [ "cmd/gosec" ]; @@ -10,10 +10,10 @@ buildGoModule rec { owner = "securego"; repo = pname; rev = "v${version}"; - sha256 = "sha256-AC3NHW7LYbpZGA+iaM9eXFLothhqZuvRJM1ehBByhpk="; + sha256 = "sha256-AlADSEekcUH/pCGggKlkBDiIYMe1zsoe9hh6fVUwQVA="; }; - vendorSha256 = "sha256-QfbElEjkYdmzYhQ8TOFIb2jfG2xzbW1UL2eLxROsBfw="; + vendorSha256 = "sha256-HBwIZfvkL9HSwkD1sZzBM7IJFAjLbCxyc95vqR5TFAg="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/tools/hobbes/default.nix b/third_party/nixpkgs/pkgs/development/tools/hobbes/default.nix index f4741a390e..1dd28af3bf 100644 --- a/third_party/nixpkgs/pkgs/development/tools/hobbes/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/hobbes/default.nix @@ -1,29 +1,35 @@ -{ lib, stdenv, fetchFromGitHub, cmake, llvm_6, ncurses, readline, zlib, libxml2 }: +{ lib, stdenv, fetchFromGitHub, cmake, llvm_12, ncurses, readline, zlib, libxml2 }: stdenv.mkDerivation { - name = "hobbes"; - version = "unstable-2020-05-19"; + pname = "hobbes"; + version = "unstable-2021-04-28"; src = fetchFromGitHub { owner = "morgan-stanley"; repo = "hobbes"; - rev = "3d80a46b44a362a97a6b963a2bf788fd1f67ade1"; - sha256 = "03m915g3283z2nfdr03dj5k76wn917knfqxb0xj3qinbl4cka2p1"; + rev = "737c7ca63516f6b3dca0e659c3de75d4325472d6"; + sha256 = "0fjsmz1sbrp6464mrb9ha7p615w2l2pdldsc2ayvcrvxfyi1r4gj"; }; + # TODO: re-enable Python tests once they work on Python 3 + # currently failing with "I don't know how to decode the primitive type: b'bool'" + postPatch = '' + rm test/Python.C + ''; + nativeBuildInputs = [ cmake ]; buildInputs = [ - llvm_6 # LLVM 6 is latest currently supported. See https://git.io/JvK6w. + llvm_12 ncurses readline zlib libxml2 ]; - doCheck = false; # Running tests in NixOS hangs. See https://git.io/JvK7R. + doCheck = true; checkTarget = "test"; meta = with lib; { @@ -32,7 +38,7 @@ stdenv.mkDerivation { Hobbes is a a language, embedded compiler, and runtime for efficient dynamic expression evaluation, data storage and analysis. ''; - homepage = "https://github.com/Morgan-Stanley/hobbes"; + homepage = "https://github.com/morganstanley/hobbes"; license = licenses.asl20; maintainers = with maintainers; [ kthielen thmzlt ]; platforms = [ "x86_64-linux" "x86_64-darwin" ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/ijq/default.nix b/third_party/nixpkgs/pkgs/development/tools/ijq/default.nix index f3c0b6c7b1..4165f9bd41 100644 --- a/third_party/nixpkgs/pkgs/development/tools/ijq/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/ijq/default.nix @@ -1,18 +1,26 @@ -{ buildGoModule, fetchgit, lib, jq, makeWrapper }: +{ buildGoModule, fetchFromSourcehut, lib, jq, installShellFiles, makeWrapper, scdoc }: buildGoModule rec { pname = "ijq"; - version = "0.3.4"; + version = "0.3.5"; - src = fetchgit { - url = "https://git.sr.ht/~gpanders/ijq"; + src = fetchFromSourcehut { + owner = "~gpanders"; + repo = pname; rev = "v${version}"; - sha256 = "ZKxEK6SPxEC0S5yXSzITPn0HhpJa4Bcf9X8/N+ZZAeA="; + sha256 = "sha256-0xLmjidPxjSkYmLI4lWieT2rswZsWBY/IUXFOrUFAMo="; }; - vendorSha256 = "04KlXE2I8ZVDbyo9tBnFskLB6fo5W5/lPzSpo8KGqUU="; + vendorSha256 = "sha256-7UuQXnQdlUMC0ZIgHydQ5bZMB5XrE7dhx5+1NI+zFkM="; - nativeBuildInputs = [ makeWrapper ]; + nativeBuildInputs = [ installShellFiles makeWrapper scdoc ]; + + ldflags = [ "-s" "-w" "-X main.Version=${version}" ]; + + postBuild = '' + scdoc < ijq.1.scd > ijq.1 + installManPage ijq.1 + ''; postInstall = '' wrapProgram "$out/bin/ijq" \ diff --git a/third_party/nixpkgs/pkgs/development/tools/irony-server/default.nix b/third_party/nixpkgs/pkgs/development/tools/irony-server/default.nix index 2a7a7b1a16..192a33ad7c 100644 --- a/third_party/nixpkgs/pkgs/development/tools/irony-server/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/irony-server/default.nix @@ -1,20 +1,16 @@ -{ lib, stdenv, cmake, llvmPackages, irony }: +{ lib, stdenv, cmake, llvmPackages, llvm, irony }: stdenv.mkDerivation { pname = "irony-server"; inherit (irony) src version; - nativeBuildInputs = [ cmake llvmPackages.llvm.dev ]; - buildInputs = [ llvmPackages.libclang llvmPackages.llvm ]; + nativeBuildInputs = [ cmake llvm ]; + buildInputs = [ llvmPackages.libclang ]; dontUseCmakeBuildDir = true; cmakeDir = "server"; - cmakeFlags = [ - "-DCMAKE_PREFIX_PATH=${llvmPackages.clang-unwrapped}" - ]; - meta = with lib; { description = "The server part of irony"; homepage = "https://melpa.org/#/irony"; diff --git a/third_party/nixpkgs/pkgs/development/tools/jbang/default.nix b/third_party/nixpkgs/pkgs/development/tools/jbang/default.nix index dfef390660..1220ec90d9 100644 --- a/third_party/nixpkgs/pkgs/development/tools/jbang/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/jbang/default.nix @@ -1,12 +1,12 @@ { stdenv, lib, fetchzip, jdk, makeWrapper, coreutils, curl }: stdenv.mkDerivation rec { - version = "0.70.0"; + version = "0.71.1"; pname = "jbang"; src = fetchzip { url = "https://github.com/jbangdev/jbang/releases/download/v${version}/${pname}-${version}.tar"; - sha256 = "sha256-Fy7TvWJVRJI5fhfZzMuW+KBLaVLWKjk/I3Kx60Wazyo="; + sha256 = "sha256-+s2Wa+5Qznqpv84VEZCMmzy0bI1mN/BknPObYqJlaYs="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/just/default.nix b/third_party/nixpkgs/pkgs/development/tools/just/default.nix index 247d055f57..8a8d420145 100644 --- a/third_party/nixpkgs/pkgs/development/tools/just/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/just/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "just"; - version = "0.9.1"; + version = "0.9.6"; src = fetchFromGitHub { owner = "casey"; repo = pname; - rev = "v${version}"; - sha256 = "sha256-5W/5HgXjDmr2JGYGy5FPmCNIuAagmzEHnskDUg+FzjY="; + rev = version; + sha256 = "sha256-FWJ7fSJysT5LVFio49nbN0T0b+zWwiV7NvEJlojbNKs="; }; - cargoSha256 = "sha256-4lLWtj/MLaSZU7nC4gVn7TyhaLtO1FUSinQejocpiuY="; + cargoSha256 = "sha256-/VmCuHPURQTyeIumMaWVrFu18ZgVR0klpc/bO1f1w4o="; nativeBuildInputs = [ installShellFiles ]; buildInputs = lib.optionals stdenv.isDarwin [ libiconv ]; @@ -31,6 +31,7 @@ rustPlatform.buildRustPackage rec { # USER must not be empty export USER=just-user export USERNAME=just-user + export JUST_CHOOSER="${coreutils}/bin/cat" # Prevent string.rs from being changed cp tests/string.rs $TMPDIR/string.rs @@ -38,22 +39,22 @@ rustPlatform.buildRustPackage rec { sed -i src/justfile.rs \ -i tests/*.rs \ -e "s@/bin/echo@${coreutils}/bin/echo@g" \ - -e "s@#!/usr/bin/env sh@#!${bash}/bin/sh@g" \ - -e "s@#!/usr/bin/env cat@#!${coreutils}/bin/cat@g" \ - -e "s@#!/usr/bin/env bash@#!${bash}/bin/sh@g" + -e "s@/usr/bin/env@${coreutils}/bin/env@g" # Return unchanged string.rs cp $TMPDIR/string.rs tests/string.rs ''; - # Skip "edit" when running "cargo test", since this test case needs "cat" and "vim". - # Skip "choose" when running "cargo test", since this test case needs "fzf". - checkFlags = [ "--skip=choose" "--skip=edit" ]; + checkFlags = [ + "--skip=edit" # trying to run "vim" fails as there's no /usr/bin/env or which in the sandbox to find vim and the dependency is not easily patched + "--skip=run_shebang" # test case very rarely fails with "Text file busy" + ]; meta = with lib; { - description = "A handy way to save and run project-specific commands"; homepage = "https://github.com/casey/just"; + changelog = "https://github.com/casey/just/blob/${version}/CHANGELOG.md"; + description = "A handy way to save and run project-specific commands"; license = licenses.cc0; - maintainers = with maintainers; [ xrelkd ]; + maintainers = with maintainers; [ xrelkd jk ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/tools/kafkacat/default.nix b/third_party/nixpkgs/pkgs/development/tools/kafkacat/default.nix index e297de7a0d..5493bf2442 100644 --- a/third_party/nixpkgs/pkgs/development/tools/kafkacat/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/kafkacat/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, pkg-config, zlib, rdkafka, yajl }: +{ lib, stdenv, fetchFromGitHub, pkg-config, zlib, rdkafka, yajl, avro-c, libserdes }: stdenv.mkDerivation rec { pname = "kafkacat"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; - buildInputs = [ zlib rdkafka yajl ]; + buildInputs = [ zlib rdkafka yajl avro-c libserdes ]; preConfigure = '' patchShebangs ./configure diff --git a/third_party/nixpkgs/pkgs/development/tools/ktlint/default.nix b/third_party/nixpkgs/pkgs/development/tools/ktlint/default.nix index 4abe6b6d17..61b4a570b8 100644 --- a/third_party/nixpkgs/pkgs/development/tools/ktlint/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/ktlint/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "ktlint"; - version = "0.40.0"; + version = "0.41.0"; src = fetchurl { - url = "https://github.com/shyiko/ktlint/releases/download/${version}/ktlint"; - sha256 = "17n1xdalz38h9p4ylcpkbbqp22b1np5l8y5l3r58kaf9k8p6cfa7"; + url = "https://github.com/pinterest/ktlint/releases/download/${version}/ktlint"; + sha256 = "10z1010k25i40iv7v339csmbs83hmwjv1004jikckb78wncd12s3"; }; nativeBuildInputs = [ makeWrapper ]; @@ -26,6 +26,6 @@ stdenv.mkDerivation rec { homepage = "https://ktlint.github.io/"; license = licenses.mit; platforms = jre_headless.meta.platforms; - maintainers = with maintainers; [ tadfisher ]; + maintainers = with maintainers; [ tadfisher SubhrajyotiSen ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/tools/kubie/default.nix b/third_party/nixpkgs/pkgs/development/tools/kubie/default.nix index 6fc254153d..c563d9bef0 100644 --- a/third_party/nixpkgs/pkgs/development/tools/kubie/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/kubie/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "kubie"; - version = "0.14.1"; + version = "0.15.0"; src = fetchFromGitHub { rev = "v${version}"; owner = "sbstp"; repo = "kubie"; - sha256 = "0mhm2j3i2ql7dz5vx0mwab8h8zr05ar5lfzdacgnrc293g1c01aq"; + sha256 = "sha256-uNlKxcU1iCR4JzNfBatEeKMMdu9ZqvOqna0sGrcwK30="; }; - cargoSha256 = "1rfqk7dmcz5zfq9fm9kvxf5718m0v0yfjm5a8718d40zzzvam7sy"; + cargoSha256 = "sha256-4Xo17HlYvJLf90R0gS9EFJSJKmNHClXqAJTx9mY29KA="; nativeBuildInputs = [ installShellFiles ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/kustomize/kustomize-sops.nix b/third_party/nixpkgs/pkgs/development/tools/kustomize/kustomize-sops.nix index 7753556a4e..9c71af5621 100644 --- a/third_party/nixpkgs/pkgs/development/tools/kustomize/kustomize-sops.nix +++ b/third_party/nixpkgs/pkgs/development/tools/kustomize/kustomize-sops.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "kustomize-sops"; - version = "2.5.5"; + version = "2.5.6"; src = fetchFromGitHub { owner = "viaduct-ai"; repo = pname; rev = "v${version}"; - sha256 = "sha256-lNC8TwX462Lnt/uiKWt9hNa81g3tdenvvuNQJNkj7hM="; + sha256 = "sha256-UEtWEOuekFbMUJFWYdXfzbCWCz4I7vVdb9UBQbMXF/A="; }; - vendorSha256 = "sha256-uStmUhiZuUguxUx2L8ifSNnbMCs7Jk+6tq7qZdACjag="; + vendorSha256 = "sha256-kNJkSivSj8LMeXobKazLy9MCTtWzrBn99GmvaH+qIUU="; installPhase = '' mkdir -p $out/lib/viaduct.ai/v1/ksops-exec/ diff --git a/third_party/nixpkgs/pkgs/development/tools/lazygit/default.nix b/third_party/nixpkgs/pkgs/development/tools/lazygit/default.nix index 7038b7c1eb..af33938c1a 100644 --- a/third_party/nixpkgs/pkgs/development/tools/lazygit/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/lazygit/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "lazygit"; - version = "0.28.1"; + version = "0.28.2"; src = fetchFromGitHub { owner = "jesseduffield"; repo = pname; rev = "v${version}"; - sha256 = "sha256-tan8ksSyMIeDL7oRAWd3Qtz/sKbhAAfY7IknfwjyvgQ="; + sha256 = "sha256-s5Ou0FhL9+2/xm7lKMG/3ya5P8idI0cgtJ28cV37pJQ="; }; vendorSha256 = null; diff --git a/third_party/nixpkgs/pkgs/development/tools/misc/act/default.nix b/third_party/nixpkgs/pkgs/development/tools/misc/act/default.nix index 8c01aea284..38520b4b3e 100644 --- a/third_party/nixpkgs/pkgs/development/tools/misc/act/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/misc/act/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "act"; - version = "0.2.22"; + version = "0.2.23"; src = fetchFromGitHub { owner = "nektos"; repo = pname; rev = "v${version}"; - sha256 = "sha256-a+yw7QSLNX3hO2GnFCifYMbPWYwtleUZS1AqPsxw9t8="; + sha256 = "sha256-PBhlBWycAYuczfP0D+Gf1pDvrfI9gz3JyGe5FBq782Y="; }; - vendorSha256 = "sha256-6jD+gY/TmO/Ot507IlTLNdWv7G4BHYlk/E9rVoRD65A="; + vendorSha256 = "sha256-dLIsVWN/PjcH0CUYRmn4YaF8Pczf/gaWhD3lulqGiuA="; doCheck = false; @@ -22,6 +22,6 @@ buildGoModule rec { homepage = "https://github.com/nektos/act"; changelog = "https://github.com/nektos/act/releases/tag/v${version}"; license = licenses.mit; - maintainers = with maintainers; [ Br1ght0ne ]; + maintainers = with maintainers; [ Br1ght0ne SuperSandro2000 ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/tools/misc/autoconf/default.nix b/third_party/nixpkgs/pkgs/development/tools/misc/autoconf/default.nix index 3b70e819c8..a2c160f566 100644 --- a/third_party/nixpkgs/pkgs/development/tools/misc/autoconf/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/misc/autoconf/default.nix @@ -6,10 +6,11 @@ # files. stdenv.mkDerivation rec { - name = "autoconf-2.71"; + pname = "autoconf"; + version = "2.71"; src = fetchurl { - url = "mirror://gnu/autoconf/${name}.tar.xz"; + url = "mirror://gnu/autoconf/autoconf-${version}.tar.xz"; sha256 = "197sl23irn6s9pd54rxj5vcp5y8dv65jb9yfqgr2g56cxg7q6k7i"; }; diff --git a/third_party/nixpkgs/pkgs/development/tools/misc/c2ffi/default.nix b/third_party/nixpkgs/pkgs/development/tools/misc/c2ffi/default.nix new file mode 100644 index 0000000000..b7a5b1dc7e --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/misc/c2ffi/default.nix @@ -0,0 +1,56 @@ +{ lib +, fetchFromGitHub +, cmake +, llvmPackages_11 +, unstableGitUpdater +}: + +let + c2ffiBranch = "llvm-11.0.0"; + llvmPackages = llvmPackages_11; +in + +llvmPackages.stdenv.mkDerivation { + pname = "c2ffi-${c2ffiBranch}"; + version = "unstable-2021-04-15"; + + src = fetchFromGitHub { + owner = "rpav"; + repo = "c2ffi"; + rev = "0255131f80b21334e565231331c2b451b6bba8c4"; + sha256 = "0ihysgqjyg5xwi098hxf15lpdi6g4nwpzczp495is912c48fy6b6"; + }; + + passthru.updateScript = unstableGitUpdater { + url = "https://github.com/rpav/c2ffi.git"; + branch = c2ffiBranch; + }; + + nativeBuildInputs = [ + cmake + ]; + + buildInputs = [ + llvmPackages.llvm + llvmPackages.clang + llvmPackages.libclang + ]; + + # This isn't much, but... + doInstallCheck = true; + installCheckPhase = '' + $out/bin/c2ffi --help 2>&1 >/dev/null + ''; + + # LLVM may be compiled with -fno-rtti, so let's just turn it off. + # A mismatch between lib{clang,LLVM}* and us can lead to the link time error: + # undefined reference to `typeinfo for clang::ASTConsumer' + CXXFLAGS="-fno-rtti"; + + meta = with lib; { + homepage = "https://github.com/rpav/c2ffi"; + description = "An LLVM based tool for extracting definitions from C, C++, and Objective C header files for use with foreign function call interfaces"; + license = licenses.lgpl21Only; + maintainers = with maintainers; [ attila-lendvai ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/tools/misc/ccache/default.nix b/third_party/nixpkgs/pkgs/development/tools/misc/ccache/default.nix index 94fca742b6..909a160c7e 100644 --- a/third_party/nixpkgs/pkgs/development/tools/misc/ccache/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/misc/ccache/default.nix @@ -1,6 +1,7 @@ { lib , stdenv , fetchFromGitHub +, fetchpatch , substituteAll , binutils , asciidoc @@ -34,6 +35,11 @@ let ccache = stdenv.mkDerivation rec { src = ./force-objdump-on-darwin.patch; objdump = "${binutils.bintools}/bin/objdump"; }) + # Fix clang C++ modules test (remove in next release) + (fetchpatch { + url = "https://github.com/ccache/ccache/commit/8b0c783ffc77d29a3e3520345b776a5c496fd892.patch"; + sha256 = "13qllx0qhfrdila6bdij9lk74fhkm3vdj01zgq1ri6ffrv9lqrla"; + }) ]; nativeBuildInputs = [ asciidoc cmake perl ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/misc/clojure-lsp/default.nix b/third_party/nixpkgs/pkgs/development/tools/misc/clojure-lsp/default.nix index dc342e501e..8783d217c1 100644 --- a/third_party/nixpkgs/pkgs/development/tools/misc/clojure-lsp/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/misc/clojure-lsp/default.nix @@ -2,22 +2,25 @@ stdenv.mkDerivation rec { pname = "clojure-lsp"; - version = "2021.04.13-12.47.33"; + version = "2021.06.01-16.19.44"; src = fetchFromGitHub { owner = pname; repo = pname; rev = version; - sha256 = "1la0d28pvp1fqnxp3scb2vawcblilwyx42djxn379vag403p1i2d"; + sha256 = "sha256-dACvjm+uEVWotoeYhA4gCenKeprpF2dI0PGNRAVALao="; }; jar = fetchurl { url = "https://github.com/clojure-lsp/clojure-lsp/releases/download/${version}/clojure-lsp.jar"; - sha256 = "059gz7y2rzwdxpyqy80w4lghzgxi5lb4rxmks1721yq6k7ljjyqy"; + sha256 = "sha256-V12rSYv/Yu12ZpLSROd+4pyGiEGRfJ7lmRqCeikcQ5Q="; }; GRAALVM_HOME = graalvm11-ce; CLOJURE_LSP_JAR = jar; + CLOJURE_LSP_XMX = "-J-Xmx4g"; + + patches = lib.optionals stdenv.isDarwin [ ./disable-check-toolchain.patch ]; buildInputs = [ graalvm11-ce ]; @@ -41,6 +44,8 @@ stdenv.mkDerivation rec { checkPhase = '' runHook preCheck + export HOME="$(mktemp -d)" + ./clojure-lsp --version | fgrep -q '${version}' ${babashka}/bin/bb integration-test/run-all.clj ./clojure-lsp runHook postCheck @@ -50,7 +55,7 @@ stdenv.mkDerivation rec { description = "Language Server Protocol (LSP) for Clojure"; homepage = "https://github.com/clojure-lsp/clojure-lsp"; license = licenses.mit; - maintainers = [ maintainers.ericdallo ]; + maintainers = with maintainers; [ ericdallo babariviere ]; platforms = graalvm11-ce.meta.platforms; }; } diff --git a/third_party/nixpkgs/pkgs/development/tools/misc/clojure-lsp/disable-check-toolchain.patch b/third_party/nixpkgs/pkgs/development/tools/misc/clojure-lsp/disable-check-toolchain.patch new file mode 100644 index 0000000000..402189627c --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/misc/clojure-lsp/disable-check-toolchain.patch @@ -0,0 +1,12 @@ +diff --git a/graalvm/native-unix-compile.sh b/graalvm/native-unix-compile.sh +index ec0e49f..e19a120 100755 +--- a/graalvm/native-unix-compile.sh ++++ b/graalvm/native-unix-compile.sh +@@ -17,6 +17,7 @@ CLOJURE_LSP_XMX=${CLOJURE_LSP_XMX:-"-J-Xmx4g"} + + args=("-jar" "$CLOJURE_LSP_JAR" + "-H:+ReportExceptionStackTraces" ++ "-H:-CheckToolchain" + "--verbose" + "--no-fallback" + "--native-image-info" diff --git a/third_party/nixpkgs/pkgs/development/tools/misc/d-feet/default.nix b/third_party/nixpkgs/pkgs/development/tools/misc/d-feet/default.nix index a44b5ed8c7..3db895f4de 100644 --- a/third_party/nixpkgs/pkgs/development/tools/misc/d-feet/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/misc/d-feet/default.nix @@ -8,7 +8,7 @@ , python3 , wrapGAppsHook , gnome -, libwnck3 +, libwnck , gobject-introspection , gettext , itstool @@ -40,7 +40,7 @@ python3.pkgs.buildPythonApplication rec { glib gnome.adwaita-icon-theme gtk3 - libwnck3 + libwnck ]; propagatedBuildInputs = with python3.pkgs; [ diff --git a/third_party/nixpkgs/pkgs/development/tools/misc/fswatch/default.nix b/third_party/nixpkgs/pkgs/development/tools/misc/fswatch/default.nix index 47716b5ea9..5eb252a9c0 100644 --- a/third_party/nixpkgs/pkgs/development/tools/misc/fswatch/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/misc/fswatch/default.nix @@ -11,13 +11,13 @@ stdenv.mkDerivation rec { pname = "fswatch"; - version = "1.15.0"; + version = "1.16.0"; src = fetchFromGitHub { owner = "emcrisostomo"; repo = "fswatch"; rev = version; - sha256 = "11479ac436g8bwk0lfnmdms0cirv9k11pdvfrrg9jwkki1j1abkk"; + sha256 = "sha256-EKbo5gkrWuijLJgYsNBDtxy0ioXu/yHxnPPeOpk620g="; }; nativeBuildInputs = [ autoreconfHook makeWrapper ] ++ lib.optionals stdenv.isDarwin [ CoreServices ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/misc/hydra/common.nix b/third_party/nixpkgs/pkgs/development/tools/misc/hydra/common.nix index 9ad8295c9b..5b1973c2b9 100644 --- a/third_party/nixpkgs/pkgs/development/tools/misc/hydra/common.nix +++ b/third_party/nixpkgs/pkgs/development/tools/misc/hydra/common.nix @@ -1,5 +1,5 @@ { stdenv, nix, perlPackages, buildEnv -, makeWrapper, autoconf, automake, libtool, unzip, pkg-config, sqlite, libpqxx +, makeWrapper, autoconf, automake, libtool, unzip, pkg-config, sqlite, libpqxx_6 , top-git, mercurial, darcs, subversion, breezy, openssl, bzip2, libxslt , perl, postgresql, nukeReferences, git, boehmgc, nlohmann_json , docbook_xsl, openssh, gnused, coreutils, findutils, gzip, xz, gnutar @@ -82,7 +82,7 @@ in stdenv.mkDerivation rec { inherit stdenv src version patches; buildInputs = - [ makeWrapper autoconf automake libtool unzip nukeReferences sqlite libpqxx + [ makeWrapper autoconf automake libtool unzip nukeReferences sqlite libpqxx_6 top-git mercurial /*darcs*/ subversion breezy openssl bzip2 libxslt perlDeps perl nix postgresql # for running the tests diff --git a/third_party/nixpkgs/pkgs/development/tools/misc/polylith/default.nix b/third_party/nixpkgs/pkgs/development/tools/misc/polylith/default.nix new file mode 100644 index 0000000000..b29b2521d1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/misc/polylith/default.nix @@ -0,0 +1,49 @@ +{ lib, stdenv, fetchurl, jre, runtimeShell }: + +stdenv.mkDerivation rec { + pname = "polylith"; + version = "0.1.0-alpha9"; + + src = fetchurl { + url = "https://github.com/polyfy/polylith/releases/download/v${version}/poly-${version}.jar"; + sha256 = "0mjn0fibj7z8wihk5frhyd5ai2bmzm909701sphjs7j9lgg0gc4k"; + }; + + dontUnpack = true; + + installPhase = '' + runHook preInstall + + mkdir -p $out/bin + + cat > "$out/bin/poly" < setup.cfg < { + Some(TypeNs::BuiltinType((*builtin).into())) + } +- PathResolution::Def( +- ModuleDef::Const(_) +- | ModuleDef::Variant(_) +- | ModuleDef::Function(_) +- | ModuleDef::Module(_) +- | ModuleDef::Static(_) +- | ModuleDef::Trait(_), +- ) => None, ++ PathResolution::Def(ModuleDef::Const(_)) ++ | PathResolution::Def(ModuleDef::Variant(_)) ++ | PathResolution::Def(ModuleDef::Function(_)) ++ | PathResolution::Def(ModuleDef::Module(_)) ++ | PathResolution::Def(ModuleDef::Static(_)) ++ | PathResolution::Def(ModuleDef::Trait(_)) => None, + PathResolution::Def(ModuleDef::TypeAlias(alias)) => { + Some(TypeNs::TypeAliasId((*alias).into())) + } +@@ -67,7 +65,8 @@ impl PathResolution { + } + PathResolution::TypeParam(param) => Some(TypeNs::GenericParam((*param).into())), + PathResolution::SelfType(impl_def) => Some(TypeNs::SelfType((*impl_def).into())), +- PathResolution::AssocItem(AssocItem::Const(_) | AssocItem::Function(_)) => None, ++ PathResolution::AssocItem(AssocItem::Const(_)) ++ | PathResolution::AssocItem(AssocItem::Function(_)) => None, + PathResolution::AssocItem(AssocItem::TypeAlias(alias)) => { + Some(TypeNs::TypeAliasId((*alias).into())) + } +diff --git a/crates/hir_def/src/item_tree/pretty.rs b/crates/hir_def/src/item_tree/pretty.rs +index e63bc8232..b1e1b70d0 100644 +--- a/crates/hir_def/src/item_tree/pretty.rs ++++ b/crates/hir_def/src/item_tree/pretty.rs +@@ -63,7 +63,7 @@ impl<'a> Printer<'a> { + fn blank(&mut self) { + let mut iter = self.buf.chars().rev().fuse(); + match (iter.next(), iter.next()) { +- (Some('\n'), Some('\n') | None) | (None, None) => {} ++ (Some('\n'), Some('\n')) | (Some('\n'), None) | (None, None) => {} + (Some('\n'), Some(_)) => { + self.buf.push('\n'); + } +@@ -77,7 +77,7 @@ impl<'a> Printer<'a> { + + fn whitespace(&mut self) { + match self.buf.chars().next_back() { +- None | Some('\n' | ' ') => {} ++ None | Some('\n') | Some(' ') => {} + _ => self.buf.push(' '), + } + } +diff --git a/crates/hir_def/src/nameres/collector.rs b/crates/hir_def/src/nameres/collector.rs +index 927a7b6e8..fc2c50fb8 100644 +--- a/crates/hir_def/src/nameres/collector.rs ++++ b/crates/hir_def/src/nameres/collector.rs +@@ -1260,7 +1260,7 @@ impl DefCollector<'_> { + for directive in &self.unresolved_imports { + if let ImportSource::Import { id: import, use_tree } = &directive.import.source { + match (directive.import.path.segments().first(), &directive.import.path.kind) { +- (Some(krate), PathKind::Plain | PathKind::Abs) => { ++ (Some(krate), PathKind::Plain) | (Some(krate), PathKind::Abs) => { + if diagnosed_extern_crates.contains(krate) { + continue; + } +diff --git a/crates/hir_def/src/resolver.rs b/crates/hir_def/src/resolver.rs +index 49c573087..5edd93a2a 100644 +--- a/crates/hir_def/src/resolver.rs ++++ b/crates/hir_def/src/resolver.rs +@@ -605,7 +605,8 @@ fn to_value_ns(per_ns: PerNs) -> Option { + ModuleDefId::ConstId(it) => ValueNs::ConstId(it), + ModuleDefId::StaticId(it) => ValueNs::StaticId(it), + +- ModuleDefId::AdtId(AdtId::EnumId(_) | AdtId::UnionId(_)) ++ ModuleDefId::AdtId(AdtId::EnumId(_)) ++ | ModuleDefId::AdtId(AdtId::UnionId(_)) + | ModuleDefId::TraitId(_) + | ModuleDefId::TypeAliasId(_) + | ModuleDefId::BuiltinType(_) +diff --git a/crates/hir_def/src/visibility.rs b/crates/hir_def/src/visibility.rs +index aeb1e7726..83500f54e 100644 +--- a/crates/hir_def/src/visibility.rs ++++ b/crates/hir_def/src/visibility.rs +@@ -172,8 +172,9 @@ impl Visibility { + /// visible in unrelated modules). + pub(crate) fn max(self, other: Visibility, def_map: &DefMap) -> Option { + match (self, other) { +- (Visibility::Module(_) | Visibility::Public, Visibility::Public) +- | (Visibility::Public, Visibility::Module(_)) => Some(Visibility::Public), ++ (Visibility::Module(_), Visibility::Public) ++ | (Visibility::Public, Visibility::Module(_)) ++ | (Visibility::Public, Visibility::Public) => Some(Visibility::Public), + (Visibility::Module(mod_a), Visibility::Module(mod_b)) => { + if mod_a.krate != mod_b.krate { + return None; +diff --git a/crates/hir_expand/src/hygiene.rs b/crates/hir_expand/src/hygiene.rs +index 848522411..05c6c3fb1 100644 +--- a/crates/hir_expand/src/hygiene.rs ++++ b/crates/hir_expand/src/hygiene.rs +@@ -146,11 +146,10 @@ impl HygieneInfo { + (&self.macro_arg.1, InFile::new(loc.kind.file_id(), arg_start)) + } + mbe::Origin::Def => match (&*self.macro_def, self.def_start) { +- ( +- TokenExpander::MacroDef { def_site_token_map, .. } +- | TokenExpander::MacroRules { def_site_token_map, .. }, +- Some(tt), +- ) => (def_site_token_map, tt), ++ (TokenExpander::MacroDef { def_site_token_map, .. }, Some(tt)) ++ | (TokenExpander::MacroRules { def_site_token_map, .. }, Some(tt)) => { ++ (def_site_token_map, tt) ++ } + _ => panic!("`Origin::Def` used with non-`macro_rules!` macro"), + }, + }; +diff --git a/crates/hir_expand/src/lib.rs b/crates/hir_expand/src/lib.rs +index c31426d7c..33107aa24 100644 +--- a/crates/hir_expand/src/lib.rs ++++ b/crates/hir_expand/src/lib.rs +@@ -368,11 +368,10 @@ impl ExpansionInfo { + let (token_map, tt) = match origin { + mbe::Origin::Call => (&self.macro_arg.1, self.arg.clone()), + mbe::Origin::Def => match (&*self.macro_def, self.def.as_ref()) { +- ( +- db::TokenExpander::MacroRules { def_site_token_map, .. } +- | db::TokenExpander::MacroDef { def_site_token_map, .. }, +- Some(tt), +- ) => (def_site_token_map, tt.as_ref().map(|tt| tt.syntax().clone())), ++ (db::TokenExpander::MacroRules { def_site_token_map, .. }, Some(tt)) ++ | (db::TokenExpander::MacroDef { def_site_token_map, .. }, Some(tt)) => { ++ (def_site_token_map, tt.as_ref().map(|tt| tt.syntax().clone())) ++ } + _ => panic!("`Origin::Def` used with non-`macro_rules!` macro"), + }, + }; +diff --git a/crates/hir_ty/src/consteval.rs b/crates/hir_ty/src/consteval.rs +index ab1afce08..6f0bf8f8c 100644 +--- a/crates/hir_ty/src/consteval.rs ++++ b/crates/hir_ty/src/consteval.rs +@@ -38,7 +38,8 @@ impl ConstExt for Const { + // FIXME: support more than just evaluating literals + pub fn eval_usize(expr: &Expr) -> Option { + match expr { +- Expr::Literal(Literal::Uint(v, None | Some(BuiltinUint::Usize))) => (*v).try_into().ok(), ++ Expr::Literal(Literal::Uint(v, None)) ++ | Expr::Literal(Literal::Uint(v, Some(BuiltinUint::Usize))) => (*v).try_into().ok(), + _ => None, + } + } +diff --git a/crates/hir_ty/src/diagnostics/match_check/deconstruct_pat.rs b/crates/hir_ty/src/diagnostics/match_check/deconstruct_pat.rs +index e3d640a79..471cd4921 100644 +--- a/crates/hir_ty/src/diagnostics/match_check/deconstruct_pat.rs ++++ b/crates/hir_ty/src/diagnostics/match_check/deconstruct_pat.rs +@@ -84,7 +84,10 @@ impl IntRange { + #[inline] + fn is_integral(ty: &Ty) -> bool { + match ty.kind(&Interner) { +- TyKind::Scalar(Scalar::Char | Scalar::Int(_) | Scalar::Uint(_) | Scalar::Bool) => true, ++ TyKind::Scalar(Scalar::Char) ++ | TyKind::Scalar(Scalar::Int(_)) ++ | TyKind::Scalar(Scalar::Uint(_)) ++ | TyKind::Scalar(Scalar::Bool) => true, + _ => false, + } + } +@@ -378,7 +381,7 @@ impl Constructor { + // Wildcards cover anything + (_, Wildcard) => true, + // The missing ctors are not covered by anything in the matrix except wildcards. +- (Missing | Wildcard, _) => false, ++ (Missing, _) | (Wildcard, _) => false, + + (Single, Single) => true, + (Variant(self_id), Variant(other_id)) => self_id == other_id, +@@ -520,7 +523,7 @@ impl SplitWildcard { + } + } + TyKind::Scalar(Scalar::Char) => unhandled(), +- TyKind::Scalar(Scalar::Int(..) | Scalar::Uint(..)) => unhandled(), ++ TyKind::Scalar(Scalar::Int(..)) | TyKind::Scalar(Scalar::Uint(..)) => unhandled(), + TyKind::Never if !cx.feature_exhaustive_patterns() && !pcx.is_top_level => { + smallvec![NonExhaustive] + } +diff --git a/crates/hir_ty/src/infer/coerce.rs b/crates/hir_ty/src/infer/coerce.rs +index 7be914451..4b7f31521 100644 +--- a/crates/hir_ty/src/infer/coerce.rs ++++ b/crates/hir_ty/src/infer/coerce.rs +@@ -47,7 +47,10 @@ impl<'a> InferenceContext<'a> { + // pointers to have a chance at getting a match. See + // https://github.com/rust-lang/rust/blob/7b805396bf46dce972692a6846ce2ad8481c5f85/src/librustc_typeck/check/coercion.rs#L877-L916 + let sig = match (ty1.kind(&Interner), ty2.kind(&Interner)) { +- (TyKind::FnDef(..) | TyKind::Closure(..), TyKind::FnDef(..) | TyKind::Closure(..)) => { ++ (TyKind::FnDef(..), TyKind::FnDef(..)) ++ | (TyKind::Closure(..), TyKind::FnDef(..)) ++ | (TyKind::FnDef(..), TyKind::Closure(..)) ++ | (TyKind::Closure(..), TyKind::Closure(..)) => { + // FIXME: we're ignoring safety here. To be more correct, if we have one FnDef and one Closure, + // we should be coercing the closure to a fn pointer of the safety of the FnDef + cov_mark::hit!(coerce_fn_reification); +@@ -445,7 +448,8 @@ fn safe_to_unsafe_fn_ty(fn_ty: FnPointer) -> FnPointer { + + fn coerce_mutabilities(from: Mutability, to: Mutability) -> Result<(), TypeError> { + match (from, to) { +- (Mutability::Mut, Mutability::Mut | Mutability::Not) ++ (Mutability::Mut, Mutability::Mut) ++ | (Mutability::Mut, Mutability::Not) + | (Mutability::Not, Mutability::Not) => Ok(()), + (Mutability::Not, Mutability::Mut) => Err(TypeError), + } +diff --git a/crates/hir_ty/src/infer/expr.rs b/crates/hir_ty/src/infer/expr.rs +index c3a5b979f..346e94128 100644 +--- a/crates/hir_ty/src/infer/expr.rs ++++ b/crates/hir_ty/src/infer/expr.rs +@@ -593,11 +593,11 @@ impl<'a> InferenceContext<'a> { + UnaryOp::Neg => { + match inner_ty.kind(&Interner) { + // Fast path for builtins +- TyKind::Scalar(Scalar::Int(_) | Scalar::Uint(_) | Scalar::Float(_)) +- | TyKind::InferenceVar( +- _, +- TyVariableKind::Integer | TyVariableKind::Float, +- ) => inner_ty, ++ TyKind::Scalar(Scalar::Int(_)) ++ | TyKind::Scalar(Scalar::Uint(_)) ++ | TyKind::Scalar(Scalar::Float(_)) ++ | TyKind::InferenceVar(_, TyVariableKind::Integer) ++ | TyKind::InferenceVar(_, TyVariableKind::Float) => inner_ty, + // Otherwise we resolve via the std::ops::Neg trait + _ => self + .resolve_associated_type(inner_ty, self.resolve_ops_neg_output()), +@@ -606,7 +606,9 @@ impl<'a> InferenceContext<'a> { + UnaryOp::Not => { + match inner_ty.kind(&Interner) { + // Fast path for builtins +- TyKind::Scalar(Scalar::Bool | Scalar::Int(_) | Scalar::Uint(_)) ++ TyKind::Scalar(Scalar::Bool) ++ | TyKind::Scalar(Scalar::Int(_)) ++ | TyKind::Scalar(Scalar::Uint(_)) + | TyKind::InferenceVar(_, TyVariableKind::Integer) => inner_ty, + // Otherwise we resolve via the std::ops::Not trait + _ => self +@@ -733,7 +735,7 @@ impl<'a> InferenceContext<'a> { + Expr::Array(array) => { + let elem_ty = + match expected.to_option(&mut self.table).as_ref().map(|t| t.kind(&Interner)) { +- Some(TyKind::Array(st, _) | TyKind::Slice(st)) => st.clone(), ++ Some(TyKind::Array(st, _)) | Some(TyKind::Slice(st)) => st.clone(), + _ => self.table.new_type_var(), + }; + +diff --git a/crates/hir_ty/src/infer/pat.rs b/crates/hir_ty/src/infer/pat.rs +index c79ed91ea..80ecd4ea9 100644 +--- a/crates/hir_ty/src/infer/pat.rs ++++ b/crates/hir_ty/src/infer/pat.rs +@@ -297,11 +297,10 @@ fn is_non_ref_pat(body: &hir_def::body::Body, pat: PatId) -> bool { + Expr::Literal(Literal::String(..)) => false, + _ => true, + }, +- Pat::Bind { +- mode: BindingAnnotation::Mutable | BindingAnnotation::Unannotated, +- subpat: Some(subpat), +- .. +- } => is_non_ref_pat(body, *subpat), ++ Pat::Bind { mode: BindingAnnotation::Mutable, subpat: Some(subpat), .. } ++ | Pat::Bind { mode: BindingAnnotation::Unannotated, subpat: Some(subpat), .. } => { ++ is_non_ref_pat(body, *subpat) ++ } + Pat::Wild | Pat::Bind { .. } | Pat::Ref { .. } | Pat::Box { .. } | Pat::Missing => false, + } + } +diff --git a/crates/hir_ty/src/op.rs b/crates/hir_ty/src/op.rs +index 5ef6342d5..0222de2bc 100644 +--- a/crates/hir_ty/src/op.rs ++++ b/crates/hir_ty/src/op.rs +@@ -8,15 +8,17 @@ pub(super) fn binary_op_return_ty(op: BinaryOp, lhs_ty: Ty, rhs_ty: Ty) -> Ty { + match op { + BinaryOp::LogicOp(_) | BinaryOp::CmpOp(_) => TyKind::Scalar(Scalar::Bool).intern(&Interner), + BinaryOp::Assignment { .. } => TyBuilder::unit(), +- BinaryOp::ArithOp(ArithOp::Shl | ArithOp::Shr) => { ++ BinaryOp::ArithOp(ArithOp::Shl) | BinaryOp::ArithOp(ArithOp::Shr) => { + // all integer combinations are valid here + if matches!( + lhs_ty.kind(&Interner), +- TyKind::Scalar(Scalar::Int(_) | Scalar::Uint(_)) ++ TyKind::Scalar(Scalar::Int(_)) ++ | TyKind::Scalar(Scalar::Uint(_)) + | TyKind::InferenceVar(_, TyVariableKind::Integer) + ) && matches!( + rhs_ty.kind(&Interner), +- TyKind::Scalar(Scalar::Int(_) | Scalar::Uint(_)) ++ TyKind::Scalar(Scalar::Int(_)) ++ | TyKind::Scalar(Scalar::Uint(_)) + | TyKind::InferenceVar(_, TyVariableKind::Integer) + ) { + lhs_ty +@@ -30,15 +32,15 @@ pub(super) fn binary_op_return_ty(op: BinaryOp, lhs_ty: Ty, rhs_ty: Ty) -> Ty { + | (TyKind::Scalar(Scalar::Uint(_)), TyKind::Scalar(Scalar::Uint(_))) + | (TyKind::Scalar(Scalar::Float(_)), TyKind::Scalar(Scalar::Float(_))) => rhs_ty, + // ({int}, int) | ({int}, uint) +- ( +- TyKind::InferenceVar(_, TyVariableKind::Integer), +- TyKind::Scalar(Scalar::Int(_) | Scalar::Uint(_)), +- ) => rhs_ty, ++ (TyKind::InferenceVar(_, TyVariableKind::Integer), TyKind::Scalar(Scalar::Int(_))) ++ | (TyKind::InferenceVar(_, TyVariableKind::Integer), TyKind::Scalar(Scalar::Uint(_))) => { ++ rhs_ty ++ } + // (int, {int}) | (uint, {int}) +- ( +- TyKind::Scalar(Scalar::Int(_) | Scalar::Uint(_)), +- TyKind::InferenceVar(_, TyVariableKind::Integer), +- ) => lhs_ty, ++ (TyKind::Scalar(Scalar::Int(_)), TyKind::InferenceVar(_, TyVariableKind::Integer)) ++ | (TyKind::Scalar(Scalar::Uint(_)), TyKind::InferenceVar(_, TyVariableKind::Integer)) => { ++ lhs_ty ++ } + // ({float} | float) + (TyKind::InferenceVar(_, TyVariableKind::Float), TyKind::Scalar(Scalar::Float(_))) => { + rhs_ty +@@ -67,15 +69,21 @@ pub(super) fn binary_op_rhs_expectation(op: BinaryOp, lhs_ty: Ty) -> Ty { + BinaryOp::Assignment { op: None } => lhs_ty, + BinaryOp::CmpOp(CmpOp::Eq { .. }) => match lhs_ty.kind(&Interner) { + TyKind::Scalar(_) | TyKind::Str => lhs_ty, +- TyKind::InferenceVar(_, TyVariableKind::Integer | TyVariableKind::Float) => lhs_ty, ++ TyKind::InferenceVar(_, TyVariableKind::Integer) ++ | TyKind::InferenceVar(_, TyVariableKind::Float) => lhs_ty, + _ => TyKind::Error.intern(&Interner), + }, +- BinaryOp::ArithOp(ArithOp::Shl | ArithOp::Shr) => TyKind::Error.intern(&Interner), ++ BinaryOp::ArithOp(ArithOp::Shl) | BinaryOp::ArithOp(ArithOp::Shr) => { ++ TyKind::Error.intern(&Interner) ++ } + BinaryOp::CmpOp(CmpOp::Ord { .. }) + | BinaryOp::Assignment { op: Some(_) } + | BinaryOp::ArithOp(_) => match lhs_ty.kind(&Interner) { +- TyKind::Scalar(Scalar::Int(_) | Scalar::Uint(_) | Scalar::Float(_)) => lhs_ty, +- TyKind::InferenceVar(_, TyVariableKind::Integer | TyVariableKind::Float) => lhs_ty, ++ TyKind::Scalar(Scalar::Int(_)) ++ | TyKind::Scalar(Scalar::Uint(_)) ++ | TyKind::Scalar(Scalar::Float(_)) => lhs_ty, ++ TyKind::InferenceVar(_, TyVariableKind::Integer) ++ | TyKind::InferenceVar(_, TyVariableKind::Float) => lhs_ty, + _ => TyKind::Error.intern(&Interner), + }, + } +diff --git a/crates/ide/src/join_lines.rs b/crates/ide/src/join_lines.rs +index ffa8bd182..93d3760bf 100644 +--- a/crates/ide/src/join_lines.rs ++++ b/crates/ide/src/join_lines.rs +@@ -197,7 +197,7 @@ fn join_single_use_tree(edit: &mut TextEditBuilder, token: &SyntaxToken) -> Opti + } + + fn is_trailing_comma(left: SyntaxKind, right: SyntaxKind) -> bool { +- matches!((left, right), (T![,], T![')'] | T![']'])) ++ matches!((left, right), (T![,], T![')']) | (T![,], T![']'])) + } + + fn compute_ws(left: SyntaxKind, right: SyntaxKind) -> &'static str { +diff --git a/crates/ide/src/references.rs b/crates/ide/src/references.rs +index 5808562a7..945c9b9e1 100644 +--- a/crates/ide/src/references.rs ++++ b/crates/ide/src/references.rs +@@ -79,7 +79,8 @@ pub(crate) fn find_all_refs( + }); + usages.references.retain(|_, it| !it.is_empty()); + } +- Definition::ModuleDef(hir::ModuleDef::Adt(_) | hir::ModuleDef::Variant(_)) => { ++ Definition::ModuleDef(hir::ModuleDef::Adt(_)) ++ | Definition::ModuleDef(hir::ModuleDef::Variant(_)) => { + refs.for_each(|it| { + it.retain(|reference| { + reference.name.as_name_ref().map_or(false, is_lit_name_ref) +diff --git a/crates/ide/src/syntax_highlighting.rs b/crates/ide/src/syntax_highlighting.rs +index d44a1b45f..e186b82b7 100644 +--- a/crates/ide/src/syntax_highlighting.rs ++++ b/crates/ide/src/syntax_highlighting.rs +@@ -294,7 +294,7 @@ fn traverse( + Some(parent) => { + // We only care Name and Name_ref + match (token.kind(), parent.kind()) { +- (IDENT, NAME | NAME_REF) => parent.into(), ++ (IDENT, NAME) | (IDENT, NAME_REF) => parent.into(), + _ => token.into(), + } + } +@@ -310,7 +310,7 @@ fn traverse( + Some(parent) => { + // We only care Name and Name_ref + match (token.kind(), parent.kind()) { +- (IDENT, NAME | NAME_REF) => parent.into(), ++ (IDENT, NAME) | (IDENT, NAME_REF) => parent.into(), + _ => token.into(), + } + } +diff --git a/crates/ide_assists/src/handlers/extract_function.rs b/crates/ide_assists/src/handlers/extract_function.rs +index ac7f0959b..9b78cf4b1 100644 +--- a/crates/ide_assists/src/handlers/extract_function.rs ++++ b/crates/ide_assists/src/handlers/extract_function.rs +@@ -1384,7 +1384,7 @@ fn fix_param_usages(ctx: &AssistContext, params: &[Param], syntax: &SyntaxNode) + for (param, usages) in usages_for_param { + for usage in usages { + match usage.syntax().ancestors().skip(1).find_map(ast::Expr::cast) { +- Some(ast::Expr::MethodCallExpr(_) | ast::Expr::FieldExpr(_)) => { ++ Some(ast::Expr::MethodCallExpr(_)) | Some(ast::Expr::FieldExpr(_)) => { + // do nothing + } + Some(ast::Expr::RefExpr(node)) +diff --git a/crates/ide_assists/src/tests.rs b/crates/ide_assists/src/tests.rs +index 841537c77..d9d9124b6 100644 +--- a/crates/ide_assists/src/tests.rs ++++ b/crates/ide_assists/src/tests.rs +@@ -181,10 +181,9 @@ fn check(handler: Handler, before: &str, expected: ExpectedResult, assist_label: + "unresolved assist should not contain source changes" + ), + (Some(_), ExpectedResult::NotApplicable) => panic!("assist should not be applicable!"), +- ( +- None, +- ExpectedResult::After(_) | ExpectedResult::Target(_) | ExpectedResult::Unresolved, +- ) => { ++ (None, ExpectedResult::After(_)) ++ | (None, ExpectedResult::Target(_)) ++ | (None, ExpectedResult::Unresolved) => { + panic!("code action is not applicable") + } + (None, ExpectedResult::NotApplicable) => (), +diff --git a/crates/ide_completion/src/completions/qualified_path.rs b/crates/ide_completion/src/completions/qualified_path.rs +index f5dbd203b..88f4d940d 100644 +--- a/crates/ide_completion/src/completions/qualified_path.rs ++++ b/crates/ide_completion/src/completions/qualified_path.rs +@@ -65,11 +65,9 @@ pub(crate) fn complete_qualified_path(acc: &mut Completions, ctx: &CompletionCon + // Don't suggest attribute macros and derives. + hir::ScopeDef::MacroDef(mac) => mac.is_fn_like(), + // no values in type places +- hir::ScopeDef::ModuleDef( +- hir::ModuleDef::Function(_) +- | hir::ModuleDef::Variant(_) +- | hir::ModuleDef::Static(_), +- ) ++ hir::ScopeDef::ModuleDef(hir::ModuleDef::Function(_)) ++ | hir::ScopeDef::ModuleDef(hir::ModuleDef::Variant(_)) ++ | hir::ScopeDef::ModuleDef(hir::ModuleDef::Static(_)) + | hir::ScopeDef::Local(_) => !ctx.expects_type(), + // unless its a constant in a generic arg list position + hir::ScopeDef::ModuleDef(hir::ModuleDef::Const(_)) => { +@@ -83,13 +81,9 @@ pub(crate) fn complete_qualified_path(acc: &mut Completions, ctx: &CompletionCon + } + } + } +- hir::PathResolution::Def( +- def +- @ +- (hir::ModuleDef::Adt(_) +- | hir::ModuleDef::TypeAlias(_) +- | hir::ModuleDef::BuiltinType(_)), +- ) => { ++ hir::PathResolution::Def(def @ hir::ModuleDef::Adt(_)) ++ | hir::PathResolution::Def(def @ hir::ModuleDef::TypeAlias(_)) ++ | hir::PathResolution::Def(def @ hir::ModuleDef::BuiltinType(_)) => { + if let hir::ModuleDef::Adt(hir::Adt::Enum(e)) = def { + add_enum_variants(acc, ctx, e); + } +diff --git a/crates/ide_completion/src/completions/unqualified_path.rs b/crates/ide_completion/src/completions/unqualified_path.rs +index 81c4fb305..8ea5a2d5b 100644 +--- a/crates/ide_completion/src/completions/unqualified_path.rs ++++ b/crates/ide_completion/src/completions/unqualified_path.rs +@@ -74,11 +74,9 @@ pub(crate) fn complete_unqualified_path(acc: &mut Completions, ctx: &CompletionC + // Don't suggest attribute macros and derives. + ScopeDef::MacroDef(mac) => mac.is_fn_like(), + // no values in type places +- ScopeDef::ModuleDef( +- hir::ModuleDef::Function(_) +- | hir::ModuleDef::Variant(_) +- | hir::ModuleDef::Static(_), +- ) ++ ScopeDef::ModuleDef(hir::ModuleDef::Function(_)) ++ | ScopeDef::ModuleDef(hir::ModuleDef::Variant(_)) ++ | ScopeDef::ModuleDef(hir::ModuleDef::Static(_)) + | ScopeDef::Local(_) => !ctx.expects_type(), + // unless its a constant in a generic arg list position + ScopeDef::ModuleDef(hir::ModuleDef::Const(_)) +diff --git a/crates/ide_completion/src/context.rs b/crates/ide_completion/src/context.rs +index 7b76600df..09eb953fd 100644 +--- a/crates/ide_completion/src/context.rs ++++ b/crates/ide_completion/src/context.rs +@@ -242,23 +242,24 @@ impl<'a> CompletionContext<'a> { + } + + pub(crate) fn expects_assoc_item(&self) -> bool { +- matches!(self.completion_location, Some(ImmediateLocation::Trait | ImmediateLocation::Impl)) ++ matches!( ++ self.completion_location, ++ Some(ImmediateLocation::Trait) | Some(ImmediateLocation::Impl) ++ ) + } + + pub(crate) fn has_dot_receiver(&self) -> bool { + matches!( + &self.completion_location, +- Some(ImmediateLocation::FieldAccess { receiver, .. } | ImmediateLocation::MethodCall { receiver,.. }) ++ Some(ImmediateLocation::FieldAccess { receiver, .. }) | Some(ImmediateLocation::MethodCall { receiver,.. }) + if receiver.is_some() + ) + } + + pub(crate) fn dot_receiver(&self) -> Option<&ast::Expr> { + match &self.completion_location { +- Some( +- ImmediateLocation::MethodCall { receiver, .. } +- | ImmediateLocation::FieldAccess { receiver, .. }, +- ) => receiver.as_ref(), ++ Some(ImmediateLocation::MethodCall { receiver, .. }) ++ | Some(ImmediateLocation::FieldAccess { receiver, .. }) => receiver.as_ref(), + _ => None, + } + } +@@ -282,7 +283,7 @@ impl<'a> CompletionContext<'a> { + pub(crate) fn expects_ident_pat_or_ref_expr(&self) -> bool { + matches!( + self.completion_location, +- Some(ImmediateLocation::IdentPat | ImmediateLocation::RefExpr) ++ Some(ImmediateLocation::IdentPat) | Some(ImmediateLocation::RefExpr) + ) + } + +@@ -293,14 +294,14 @@ impl<'a> CompletionContext<'a> { + pub(crate) fn in_use_tree(&self) -> bool { + matches!( + self.completion_location, +- Some(ImmediateLocation::Use | ImmediateLocation::UseTree) ++ Some(ImmediateLocation::Use) | Some(ImmediateLocation::UseTree) + ) + } + + pub(crate) fn has_impl_or_trait_prev_sibling(&self) -> bool { + matches!( + self.prev_sibling, +- Some(ImmediatePrevSibling::ImplDefType | ImmediatePrevSibling::TraitDefName) ++ Some(ImmediatePrevSibling::ImplDefType) | Some(ImmediatePrevSibling::TraitDefName) + ) + } + +@@ -321,16 +322,14 @@ impl<'a> CompletionContext<'a> { + || self.previous_token_is(T![unsafe]) + || matches!( + self.prev_sibling, +- Some(ImmediatePrevSibling::Attribute | ImmediatePrevSibling::Visibility) ++ Some(ImmediatePrevSibling::Attribute) | Some(ImmediatePrevSibling::Visibility) + ) + || matches!( + self.completion_location, +- Some( +- ImmediateLocation::Attribute(_) +- | ImmediateLocation::ModDeclaration(_) +- | ImmediateLocation::RecordPat(_) +- | ImmediateLocation::RecordExpr(_) +- ) ++ Some(ImmediateLocation::Attribute(_)) ++ | Some(ImmediateLocation::ModDeclaration(_)) ++ | Some(ImmediateLocation::RecordPat(_)) ++ | Some(ImmediateLocation::RecordExpr(_)) + ) + } + +@@ -704,8 +703,8 @@ fn path_or_use_tree_qualifier(path: &ast::Path) -> Option<(ast::Path, bool)> { + + fn has_ref(token: &SyntaxToken) -> bool { + let mut token = token.clone(); +- for skip in [WHITESPACE, IDENT, T![mut]] { +- if token.kind() == skip { ++ for skip in &[WHITESPACE, IDENT, T![mut]] { ++ if token.kind() == *skip { + token = match token.prev_token() { + Some(it) => it, + None => return false, +diff --git a/crates/ide_completion/src/render/builder_ext.rs b/crates/ide_completion/src/render/builder_ext.rs +index 33d3a5ee1..749dfc665 100644 +--- a/crates/ide_completion/src/render/builder_ext.rs ++++ b/crates/ide_completion/src/render/builder_ext.rs +@@ -32,7 +32,7 @@ impl Builder { + cov_mark::hit!(no_parens_in_use_item); + return false; + } +- if matches!(ctx.path_call_kind(), Some(CallKind::Expr | CallKind::Pat)) ++ if matches!(ctx.path_call_kind(), Some(CallKind::Expr) | Some(CallKind::Pat)) + | matches!( + ctx.completion_location, + Some(ImmediateLocation::MethodCall { has_parens: true, .. }) +diff --git a/crates/mbe/src/expander/matcher.rs b/crates/mbe/src/expander/matcher.rs +index b4f2fe9a4..c2a9a38c9 100644 +--- a/crates/mbe/src/expander/matcher.rs ++++ b/crates/mbe/src/expander/matcher.rs +@@ -804,17 +804,33 @@ impl<'a> TtIter<'a> { + }; + + match (punct.char, second, third) { +- ('.', '.', Some('.' | '=')) | ('<', '<', Some('=')) | ('>', '>', Some('=')) => { ++ ('.', '.', Some('.')) ++ | ('.', '.', Some('=')) ++ | ('<', '<', Some('=')) ++ | ('>', '>', Some('=')) => { + let tt2 = self.next().unwrap().clone(); + let tt3 = self.next().unwrap().clone(); + Ok(tt::Subtree { delimiter: None, token_trees: vec![tt, tt2, tt3] }.into()) + } +- ('-' | '!' | '*' | '/' | '&' | '%' | '^' | '+' | '<' | '=' | '>' | '|', '=', _) +- | ('-' | '=' | '>', '>', _) ++ ('-', '=', _) ++ | ('-', '>', _) + | (':', ':', _) ++ | ('!', '=', _) + | ('.', '.', _) ++ | ('*', '=', _) ++ | ('/', '=', _) + | ('&', '&', _) ++ | ('&', '=', _) ++ | ('%', '=', _) ++ | ('^', '=', _) ++ | ('+', '=', _) + | ('<', '<', _) ++ | ('<', '=', _) ++ | ('=', '=', _) ++ | ('=', '>', _) ++ | ('>', '=', _) ++ | ('>', '>', _) ++ | ('|', '=', _) + | ('|', '|', _) => { + let tt2 = self.next().unwrap().clone(); + Ok(tt::Subtree { delimiter: None, token_trees: vec![tt, tt2] }.into()) +diff --git a/crates/parser/src/grammar/params.rs b/crates/parser/src/grammar/params.rs +index 5a78675fb..e0c1d3b3a 100644 +--- a/crates/parser/src/grammar/params.rs ++++ b/crates/parser/src/grammar/params.rs +@@ -184,7 +184,8 @@ fn opt_self_param(p: &mut Parser, m: Marker) -> Result<(), Marker> { + if !matches!( + (p.current(), la1, la2, la3), + (T![&], T![self], _, _) +- | (T![&], T![mut] | LIFETIME_IDENT, T![self], _) ++ | (T![&], LIFETIME_IDENT, T![self], _) ++ | (T![&], T![mut], T![self], _) + | (T![&], LIFETIME_IDENT, T![mut], T![self]) + ) { + return Err(m); +diff --git a/crates/vfs/src/vfs_path.rs b/crates/vfs/src/vfs_path.rs +index ef2d7657a..2b3d7fd84 100644 +--- a/crates/vfs/src/vfs_path.rs ++++ b/crates/vfs/src/vfs_path.rs +@@ -389,7 +389,7 @@ impl VirtualPath { + + match (file_stem, extension) { + (None, None) => None, +- (None | Some(""), Some(_)) => Some((file_name, None)), ++ (None, Some(_)) | (Some(""), Some(_)) => Some((file_name, None)), + (Some(file_stem), extension) => Some((file_stem, extension)), + } + } +diff --git a/xtask/src/install.rs b/xtask/src/install.rs +index 64ab12b42..7e2dccdfe 100644 +--- a/xtask/src/install.rs ++++ b/xtask/src/install.rs +@@ -8,7 +8,7 @@ use xshell::{cmd, pushd}; + use crate::flags; + + // Latest stable, feel free to send a PR if this lags behind. +-const REQUIRED_RUST_VERSION: u32 = 53; ++const REQUIRED_RUST_VERSION: u32 = 52; + + impl flags::Install { + pub(crate) fn run(self) -> Result<()> { diff --git a/third_party/nixpkgs/pkgs/development/tools/rust/rust-analyzer/update.sh b/third_party/nixpkgs/pkgs/development/tools/rust/rust-analyzer/update.sh index a67b6c927a..3010b9bf38 100755 --- a/third_party/nixpkgs/pkgs/development/tools/rust/rust-analyzer/update.sh +++ b/third_party/nixpkgs/pkgs/development/tools/rust/rust-analyzer/update.sh @@ -51,6 +51,9 @@ build_deps="../../../../misc/vscode-extensions/rust-analyzer/build-deps" jq '{ name, version, dependencies: (.dependencies + .devDependencies) }' "$node_src/package.json" \ >"$build_deps/package.json.new" +# FIXME: vsce@1.93.0 breaks the build. +sed 's/"vsce": ".*"/"vsce": "=1.88.0"/' --in-place "$build_deps/package.json.new" + if cmp --quiet "$build_deps"/package.json{.new,}; then echo "package.json not changed, skip updating nodePackages" rm "$build_deps"/package.json.new diff --git a/third_party/nixpkgs/pkgs/development/tools/sentry-cli/default.nix b/third_party/nixpkgs/pkgs/development/tools/sentry-cli/default.nix new file mode 100644 index 0000000000..884c0edfb7 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/sentry-cli/default.nix @@ -0,0 +1,40 @@ +{ rustPlatform +, fetchFromGitHub +, lib +, openssl +, file +, rpm +, pkg-config +, stdenv +, curl +, Security +, runCommand +}: +rustPlatform.buildRustPackage rec { + pname = "sentry-cli"; + version = "1.66.0"; + + src = fetchFromGitHub { + owner = "getsentry"; + repo = "sentry-cli"; + rev = version; + sha256 = "sha256-ivQBn5GGb64Jq0gpywAg20309QQMpasg/Bu5sHKj02Y="; + }; + doCheck = false; + + # Needed to get openssl-sys to use pkgconfig. + OPENSSL_NO_VENDOR = 1; + + buildInputs = [ openssl file rpm ] ++ lib.optionals stdenv.isDarwin [ Security curl ]; + nativeBuildInputs = [ pkg-config ]; + + cargoSha256 = "sha256-xS88KZWYkg3v8TJZUVVgQhR++CrZGD0DQnLPktSUJQk="; + + meta = with lib; { + homepage = "https://docs.sentry.io/cli/"; + license = licenses.bsd3; + description = "A command line utility to work with Sentry."; + maintainers = with maintainers; [ rizary ]; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/tools/sourcetrail/default.nix b/third_party/nixpkgs/pkgs/development/tools/sourcetrail/default.nix index 7b06e720ca..6ba4eecac4 100644 --- a/third_party/nixpkgs/pkgs/development/tools/sourcetrail/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/sourcetrail/default.nix @@ -120,7 +120,7 @@ in stdenv.mkDerivation rec { # Sourcetrail attempts to copy clang headers from the LLVM store path substituteInPlace CMakeLists.txt \ - --replace "\''${LLVM_BINARY_DIR}" '${llvmPackages.clang-unwrapped}' + --replace "\''${LLVM_BINARY_DIR}" '${lib.getLib llvmPackages.clang-unwrapped}' patchShebangs script ln -sf ${installJavaIndexer} script/update_java_indexer.sh diff --git a/third_party/nixpkgs/pkgs/development/tools/stylua/default.nix b/third_party/nixpkgs/pkgs/development/tools/stylua/default.nix new file mode 100644 index 0000000000..7394b402cf --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/stylua/default.nix @@ -0,0 +1,35 @@ +{ fetchFromGitHub +, lib +, rustPlatform +, stdenvNoCC +, lua52Support ? true +, luauSupport ? false +}: + +rustPlatform.buildRustPackage rec { + pname = "stylua"; + version = "0.9.3"; + + src = fetchFromGitHub { + owner = "johnnymorganz"; + repo = pname; + rev = "v${version}"; + sha256 = "1xpl3nxiln6hxxjd9nx99h4qijjym3afxm5nalw40p152h8zgig4"; + }; + + cargoSha256 = "012zv1myackwk0x73l6ri7zzrzwdkd970hh4p30b590bmsam6sb9"; + + cargoBuildFlags = lib.optionals lua52Support [ "--features" "lua52" ] + ++ lib.optionals luauSupport [ "--features" "luau" ]; + + # test_standard fails on darwin + doCheck = !stdenvNoCC.isDarwin; + + meta = with lib; { + description = "An opinionated Lua code formatter"; + homepage = "https://github.com/johnnymorganz/stylua"; + changelog = "https://github.com/johnnymorganz/stylua/blob/v${version}/CHANGELOG.md"; + license = licenses.mpl20; + maintainers = with maintainers; [ figsoda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/tools/symfony-cli/default.nix b/third_party/nixpkgs/pkgs/development/tools/symfony-cli/default.nix new file mode 100644 index 0000000000..6ff541b933 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/tools/symfony-cli/default.nix @@ -0,0 +1,29 @@ +{ stdenvNoCC, fetchurl, lib }: + +stdenvNoCC.mkDerivation rec { + pname = "symfony-cli"; + version = "4.25.4"; + + src = fetchurl { + url = "https://github.com/symfony/cli/releases/download/v${version}/symfony_linux_amd64.gz"; + sha256 = "94ade97d79e6949022ac45e4f8f9c025a9e3efa54a1a891a086a24eb9a9765a7"; + }; + + dontBuild = true; + + unpackPhase = '' + gunzip <$src >symfony + ''; + + installPhase = '' + install -D -t $out/bin symfony + ''; + + meta = with lib; { + description = "Symfony CLI"; + homepage = "https://symfony.com/download"; + license = licenses.unfree; + maintainers = with maintainers; [ drupol ]; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/tools/thrust/default.nix b/third_party/nixpkgs/pkgs/development/tools/thrust/default.nix index fcb1edf153..cc46f3f5d3 100644 --- a/third_party/nixpkgs/pkgs/development/tools/thrust/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/thrust/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, buildEnv, makeWrapper, glib, alsaLib , dbus, gtk2, atk +{ lib, stdenv, fetchurl, buildEnv, makeWrapper, glib, alsa-lib , dbus, gtk2, atk , pango, freetype, fontconfig, gdk-pixbuf , cairo, cups, expat, nspr, gconf, nss , xorg, libcap, unzip }: @@ -8,7 +8,7 @@ let name = "env-thrust"; paths = [ stdenv.cc.cc glib dbus gtk2 atk pango freetype fontconfig gdk-pixbuf - cairo cups expat alsaLib nspr gconf nss xorg.libXrender xorg.libX11 + cairo cups expat alsa-lib nspr gconf nss xorg.libXrender xorg.libX11 xorg.libXext xorg.libXdamage xorg.libXtst xorg.libXcomposite xorg.libXi xorg.libXfixes xorg.libXrandr xorg.libXcursor libcap ]; diff --git a/third_party/nixpkgs/pkgs/development/tools/turbogit/default.nix b/third_party/nixpkgs/pkgs/development/tools/turbogit/default.nix index 68bd106835..7d3e88f6cb 100644 --- a/third_party/nixpkgs/pkgs/development/tools/turbogit/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/turbogit/default.nix @@ -1,20 +1,21 @@ -{ fetchFromGitHub, buildGoModule, lib, installShellFiles }: +{ fetchFromGitHub, buildGoModule, lib, installShellFiles, libgit2, pkg-config }: buildGoModule rec { pname = "turbogit"; - version = "1.2.0"; + version = "2.0.0"; src = fetchFromGitHub { owner = "b4nst"; repo = pname; rev = "v${version}"; - sha256 = "sha256-alVgXnsoC2nmUe6i/l0ttUjoXpKLHr0n/7p6WbIIGBU="; + sha256 = "sha256-UIPI1r6BnfD5ukk5yGg3VJHMyaMp30MXhJfOkoNT6vs="; }; - vendorSha256 = "sha256-6fxbxpROYiNw5SYdQAIdy5NfqzOcFfAlJ+vTQyFtink="; + vendorSha256 = "sha256-SX0VPENcfw8ysL+dDGPSJ/FNdyecjENx4+UHXdu71O8="; subPackages = [ "." ]; - nativeBuildInputs = [ installShellFiles ]; + buildInputs = [ libgit2 ]; + nativeBuildInputs = [ installShellFiles pkg-config ]; postInstall = '' # Move turbogit binary to tug ln -s $out/bin/turbogit $out/bin/tug @@ -37,6 +38,7 @@ buildGoModule rec { ''; homepage = "https://b4nst.github.io/turbogit"; license = licenses.mit; + platforms = platforms.linux ++ platforms.darwin; maintainers = [ maintainers.yusdacra ]; }; } diff --git a/third_party/nixpkgs/pkgs/development/tools/unity3d/default.nix b/third_party/nixpkgs/pkgs/development/tools/unity3d/default.nix index 5c41a1dac9..9333864c69 100644 --- a/third_party/nixpkgs/pkgs/development/tools/unity3d/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/unity3d/default.nix @@ -1,6 +1,6 @@ { stdenv, lib, fetchurl, makeWrapper, file, getopt , gtk2, gtk3, gdk-pixbuf, glib, libGL, libGLU, nss, nspr, udev, tbb -, alsaLib, GConf, cups, libcap, fontconfig, freetype, pango +, alsa-lib, GConf, cups, libcap, fontconfig, freetype, pango , cairo, dbus, expat, zlib, libpng12, nodejs, gnutar, gcc, gcc_32bit , libX11, libXcursor, libXdamage, libXfixes, libXrender, libXi , libXcomposite, libXext, libXrandr, libXtst, libSM, libICE, libxcb, chromium @@ -10,7 +10,7 @@ let libPath64 = lib.makeLibraryPath [ gcc.cc gtk2 gdk-pixbuf glib libGL libGLU nss nspr - alsaLib GConf cups libcap fontconfig freetype pango + alsa-lib GConf cups libcap fontconfig freetype pango cairo dbus expat zlib libpng12 udev tbb libX11 libXcursor libXdamage libXfixes libXrender libXi libXcomposite libXext libXrandr libXtst libSM libICE libxcb diff --git a/third_party/nixpkgs/pkgs/development/tools/unityhub/default.nix b/third_party/nixpkgs/pkgs/development/tools/unityhub/default.nix index dc2f802211..19cd15e7be 100644 --- a/third_party/nixpkgs/pkgs/development/tools/unityhub/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/unityhub/default.nix @@ -6,7 +6,7 @@ in appimageTools.wrapType2 rec { name = "unityhub"; extraPkgs = (pkgs: with pkgs; with xorg; [ gtk2 gdk_pixbuf glib libGL libGLU nss nspr - alsaLib cups gnome2.GConf libcap fontconfig freetype pango + alsa-lib cups gnome2.GConf libcap fontconfig freetype pango cairo dbus dbus-glib libdbusmenu libdbusmenu-gtk2 expat zlib libpng12 udev tbb libpqxx gtk3 libsecret lsb-release openssl nodejs ncurses5 diff --git a/third_party/nixpkgs/pkgs/development/tools/wasm-bindgen-cli/Cargo.lock b/third_party/nixpkgs/pkgs/development/tools/wasm-bindgen-cli/Cargo.lock index 165aa6ac85..094c703b65 100644 --- a/third_party/nixpkgs/pkgs/development/tools/wasm-bindgen-cli/Cargo.lock +++ b/third_party/nixpkgs/pkgs/development/tools/wasm-bindgen-cli/Cargo.lock @@ -15,9 +15,9 @@ checksum = "aae1277d39aeec15cb388266ecc24b11c80469deae6067e17a1a7aa9e5c1f234" [[package]] name = "aho-corasick" -version = "0.7.13" +version = "0.7.18" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "043164d8ba5c4c3035fec9bbee8647c0261d788f3474306f93bb65901cae0e86" +checksum = "1e37cfd5e7657ada45f742d6e99ca5788580b5c529dc78faf11ece6dc702656f" dependencies = [ "memchr", ] @@ -33,9 +33,9 @@ dependencies = [ [[package]] name = "anyhow" -version = "1.0.32" +version = "1.0.40" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "6b602bfe940d21c130f3895acd65221e8a61270debe89d628b9cb4e3ccb8569b" +checksum = "28b2cd92db5cbd74e8e5028f7e27dd7aa3090e89e4f2a197cc7c8dfb69c7063b" [[package]] name = "arrayref" @@ -45,21 +45,21 @@ checksum = "a4c527152e37cf757a3f78aae5a06fbeefdb07ccc535c980a3208ee3060dd544" [[package]] name = "arrayvec" -version = "0.5.1" +version = "0.5.2" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "cff77d8686867eceff3105329d4698d96c2391c176d5d03adc90c7389162b5b8" +checksum = "23b62fc65de8e4e7f52534fb52b0f3ed04746ae267519eef2a83941e8085068b" [[package]] name = "ascii" -version = "0.8.7" +version = "1.0.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "97be891acc47ca214468e09425d02cef3af2c94d0d82081cd02061f996802f14" +checksum = "bbf56136a5198c7b01a49e3afcbef6cf84597273d298f54432926024107b0109" [[package]] name = "askama" -version = "0.10.3" +version = "0.10.5" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "70a6e7ebd44d0047fd48206c83c5cd3214acc7b9d87f001da170145c47ef7d12" +checksum = "d298738b6e47e1034e560e5afe63aa488fea34e25ec11b855a76f0d7b8e73134" dependencies = [ "askama_derive", "askama_escape", @@ -68,13 +68,12 @@ dependencies = [ [[package]] name = "askama_derive" -version = "0.10.3" +version = "0.10.5" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "e1d7169690c4f56343dcd821ab834972a22570a2662a19a84fd7775d5e1c3881" +checksum = "ca2925c4c290382f9d2fa3d1c1b6a63fa1427099721ecca4749b154cc9c25522" dependencies = [ "askama_shared", "proc-macro2", - "quote", "syn", ] @@ -86,15 +85,15 @@ checksum = "90c108c1a94380c89d2215d0ac54ce09796823cca0fd91b299cfff3b33e346fb" [[package]] name = "askama_shared" -version = "0.10.4" +version = "0.11.1" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "62fc272363345c8cdc030e4c259d9d028237f8b057dc9bb327772a257bde6bb5" +checksum = "2582b77e0f3c506ec4838a25fa8a5f97b9bed72bb6d3d272ea1c031d8bd373bc" dependencies = [ "askama_escape", "humansize", - "nom", - "num-traits 0.2.12", - "percent-encoding 2.1.0", + "nom 6.1.2", + "num-traits 0.2.14", + "percent-encoding", "proc-macro2", "quote", "serde", @@ -104,10 +103,11 @@ dependencies = [ [[package]] name = "assert_cmd" -version = "1.0.1" +version = "1.0.5" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "c88b9ca26f9c16ec830350d309397e74ee9abdfd8eb1f71cb6ecc71a3fc818da" +checksum = "a88b6bd5df287567ffdf4ddf4d33060048e1068308e5f62d81c6f9824a045a48" dependencies = [ + "bstr", "doc-comment", "predicates", "predicates-core", @@ -134,9 +134,9 @@ checksum = "1d49d90015b3c36167a20fe2810c5cd875ad504b39cff3d4eae7977e6b7c1cb2" [[package]] name = "autocfg" -version = "1.0.0" +version = "1.0.1" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "f8aac770f1885fd7e387acedd76065302551364496e46b3dd00860b2f8359b9d" +checksum = "cdb031dd78e28731d87d56cc8ffef4a8f36ca26c38fe2de700543e627f8a464a" [[package]] name = "base64" @@ -150,9 +150,18 @@ dependencies = [ [[package]] name = "base64" -version = "0.11.0" +version = "0.10.1" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "b41b7ea54a0c9d92199de89e20e58d49f02f8e699814ef3fdf266f6f748d15c7" +checksum = "0b25d992356d2eb0ed82172f5248873db5560c4721f564b13cb5193bda5e668e" +dependencies = [ + "byteorder", +] + +[[package]] +name = "base64" +version = "0.13.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "904dfeac50f3cdaba28fc6f57fdcddb75f49ed61346676a78c4ffe55877802fd" [[package]] name = "bitflags" @@ -167,16 +176,39 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "cf1de2fe8c75bc145a2f577add951f8134889b4795d47466a54a5c846d691693" [[package]] -name = "blake2b_simd" -version = "0.5.10" +name = "bitvec" +version = "0.19.5" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "d8fb2d74254a3a0b5cac33ac9f8ed0e44aa50378d9dbb2e5d83bd21ed1dc2c8a" +checksum = "8942c8d352ae1838c9dda0b0ca2ab657696ef2232a20147cf1b30ae1a9cb4321" +dependencies = [ + "funty", + "radium", + "tap", + "wyz", +] + +[[package]] +name = "blake2b_simd" +version = "0.5.11" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "afa748e348ad3be8263be728124b24a24f268266f6f5d58af9d75f6a40b5c587" dependencies = [ "arrayref", "arrayvec", "constant_time_eq", ] +[[package]] +name = "bstr" +version = "0.2.16" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "90682c8d613ad3373e66de8c6411e0ae2ab2571e879d2efbf73558cc66f21279" +dependencies = [ + "lazy_static", + "memchr", + "regex-automata", +] + [[package]] name = "buf_redux" version = "0.8.4" @@ -189,15 +221,15 @@ dependencies = [ [[package]] name = "bumpalo" -version = "3.4.0" +version = "3.7.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "2e8c087f005730276d1096a652e92a8bacee2e2472bcc9715a74d2bec38b5820" +checksum = "9c59e7af012c713f529e7a3ee57ce9b31ddd858d4b512923602f74608b009631" [[package]] name = "byteorder" -version = "1.3.4" +version = "1.4.3" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "08c48aae112d48ed9f069b33538ea9e3e90aa263cfa3d1c24309612b1f7472de" +checksum = "14c189c53d098945499cdfa7ecc63567cf3886b3332b312a5b4585d8d3a6a610" [[package]] name = "canvas" @@ -210,9 +242,9 @@ dependencies = [ [[package]] name = "cc" -version = "1.0.58" +version = "1.0.68" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "f9a06fb2e53271d7c279ec1efea6ab691c35a2ae67ec0d91d7acec0caf13b518" +checksum = "4a72c244c1ff497a746a7e1fb3d14bd08420ecda70c8f25c7112f2781652d787" [[package]] name = "cfg-if" @@ -235,26 +267,28 @@ dependencies = [ [[package]] name = "chrono" -version = "0.4.13" +version = "0.4.19" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "c74d84029116787153e02106bf53e66828452a4b325cc8652b788b5967c0a0b6" +checksum = "670ad68c9088c2a963aaa298cb369688cf3f9465ce5e2d4ca10e6e0098a1ce73" dependencies = [ + "libc", "num-integer", - "num-traits 0.2.12", + "num-traits 0.2.14", "time", + "winapi", ] [[package]] name = "chunked_transfer" -version = "0.3.1" +version = "1.4.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "498d20a7aaf62625b9bf26e637cf7736417cde1d0c99f1d04d1170229a85cf87" +checksum = "fff857943da45f546682664a79488be82e69e43c1a7a2307679ab9afb3a66d2e" [[package]] name = "clap" -version = "2.33.1" +version = "2.33.3" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "bdfa80d47f954d53a35a64987ca1422f495b8d6483c0fe9f7117b36c2a792129" +checksum = "37e58ac78573c40708d45522f0d80fa2f01cc4f9b4e2bf749807255454312002" dependencies = [ "ansi_term", "atty", @@ -285,9 +319,9 @@ dependencies = [ [[package]] name = "color_quant" -version = "1.0.1" +version = "1.1.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "0dbbb57365263e881e805dc77d94697c9118fd94d8da011240555aa7b23445bd" +checksum = "3d7b894f5411737b7867f4827955924d7c254fc9f4d91a6aad6b097804b1018b" [[package]] name = "console_error_panic_hook" @@ -314,58 +348,54 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "245097e9a4535ee1e3e3931fcfcd55a796a44c643e8596ff6566d68f09b87bbc" [[package]] -name = "crossbeam-deque" -version = "0.7.3" +name = "crossbeam-channel" +version = "0.5.1" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "9f02af974daeee82218205558e51ec8768b48cf524bd01d550abe5573a608285" +checksum = "06ed27e177f16d65f0f0c22a213e17c696ace5dd64b14258b52f9417ccb52db4" dependencies = [ + "cfg-if 1.0.0", + "crossbeam-utils", +] + +[[package]] +name = "crossbeam-deque" +version = "0.8.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "94af6efb46fef72616855b036a624cf27ba656ffc9be1b9a3c931cfc7749a9a9" +dependencies = [ + "cfg-if 1.0.0", "crossbeam-epoch", "crossbeam-utils", - "maybe-uninit", ] [[package]] name = "crossbeam-epoch" -version = "0.8.2" +version = "0.9.5" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "058ed274caafc1f60c4997b5fc07bf7dc7cca454af7c6e81edffe5f33f70dace" +checksum = "4ec02e091aa634e2c3ada4a392989e7c3116673ef0ac5b72232439094d73b7fd" dependencies = [ - "autocfg 1.0.0", - "cfg-if 0.1.10", + "cfg-if 1.0.0", "crossbeam-utils", "lazy_static", - "maybe-uninit", "memoffset", "scopeguard", ] -[[package]] -name = "crossbeam-queue" -version = "0.2.3" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "774ba60a54c213d409d5353bda12d49cd68d14e45036a285234c8d6f91f92570" -dependencies = [ - "cfg-if 0.1.10", - "crossbeam-utils", - "maybe-uninit", -] - [[package]] name = "crossbeam-utils" -version = "0.7.2" +version = "0.8.5" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "c3c7c73a2d1e9fc0886a08b93e98eb643461230d5f1925e4036204d5f2e261a8" +checksum = "d82cfc11ce7f2c3faef78d8a684447b40d503d9681acebed6cb728d45940c4db" dependencies = [ - "autocfg 1.0.0", - "cfg-if 0.1.10", + "cfg-if 1.0.0", "lazy_static", ] [[package]] name = "curl" -version = "0.4.31" +version = "0.4.38" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "9447ad28eee2a5cfb031c329d46bef77487244fff6a724b378885b8691a35f78" +checksum = "003cb79c1c6d1c93344c7e1201bb51c2148f24ec2bd9c253709d6b2efb796515" dependencies = [ "curl-sys", "libc", @@ -378,9 +408,9 @@ dependencies = [ [[package]] name = "curl-sys" -version = "0.4.33+curl-7.71.1" +version = "0.4.44+curl-7.77.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "3e9818ea018327f79c811612f29b9834d2abddbe7db81460a2d5c7e12946b337" +checksum = "4b6d85e9322b193f117c966e79c2d6929ec08c02f339f950044aba12e20bbaf1" dependencies = [ "cc", "libc", @@ -439,14 +469,14 @@ checksum = "fea41bba32d969b513997752735605054bc0dfa92b4c56bf1189f2e174be7a10" [[package]] name = "docopt" -version = "1.1.0" +version = "1.1.1" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "7f525a586d310c87df72ebcd98009e57f1cc030c8c268305287a476beb653969" +checksum = "7f3f119846c823f9eafcf953a8f6ffb6ed69bf6240883261a7f13b634579a51f" dependencies = [ "lazy_static", "regex", "serde", - "strsim 0.9.3", + "strsim 0.10.0", ] [[package]] @@ -459,9 +489,9 @@ dependencies = [ [[package]] name = "either" -version = "1.5.3" +version = "1.6.1" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "bb1f6b1ce1c140482ea30ddd3335fc0024ac7ee112895426e0a629a6c20adfe3" +checksum = "e78d4f1cc4ae33bbfc157ed5d5a5ef3bc29227303d595861deb238fcec4e9457" [[package]] name = "enum_primitive" @@ -480,7 +510,7 @@ checksum = "17392a012ea30ef05a610aa97dfb49496e71c9f676b27879922ea5bdf60d9d3f" dependencies = [ "atty", "humantime", - "log 0.4.11", + "log 0.4.14", "regex", "termcolor", ] @@ -499,13 +529,13 @@ dependencies = [ [[package]] name = "filetime" -version = "0.2.11" +version = "0.2.14" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "e500da2fab70bdc43f8f0e0b350a227f31c72311c56aba48f01d5cd62bb0345b" +checksum = "1d34cfa13a63ae058bfa601fe9e313bbdb3746427c1459185464ce0fcf62e1e8" dependencies = [ - "cfg-if 0.1.10", + "cfg-if 1.0.0", "libc", - "redox_syscall", + "redox_syscall 0.2.8", "winapi", ] @@ -515,7 +545,7 @@ version = "0.8.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "e1267f4ac4f343772758f7b1bdcbe767c218bbab93bb432acbf5162bbf85a6c4" dependencies = [ - "num-traits 0.2.12", + "num-traits 0.2.14", ] [[package]] @@ -533,6 +563,16 @@ version = "0.1.1" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "00b0228411908ca8685dba7fc2cdd70ec9990a6e753e89b6ac91a84c40fbaf4b" +[[package]] +name = "form_urlencoded" +version = "1.0.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "5fc25a87fa4fd2094bffb06925852034d90a17f0d1e05197d4956d3555752191" +dependencies = [ + "matches", + "percent-encoding", +] + [[package]] name = "fuchsia-cprng" version = "0.1.1" @@ -540,10 +580,16 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "a06f77d526c1a601b7c4cdd98f54b5eaabffc14d5f2f0296febdc7f357c6d3ba" [[package]] -name = "futures" -version = "0.3.5" +name = "funty" +version = "1.1.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "1e05b85ec287aac0dc34db7d4a569323df697f9c55b99b15d6b4ef8cde49f613" +checksum = "fed34cd105917e91daa4da6b3728c47b068749d6a62c59811f06ed2ac71d9da7" + +[[package]] +name = "futures" +version = "0.3.15" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "0e7e43a803dae2fa37c1f6a8fe121e1f7bf9548b4dfc0522a42f34145dadfc27" dependencies = [ "futures-channel", "futures-core", @@ -556,9 +602,9 @@ dependencies = [ [[package]] name = "futures-channel" -version = "0.3.5" +version = "0.3.15" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "f366ad74c28cca6ba456d95e6422883cfb4b252a83bed929c83abfdbbf2967d5" +checksum = "e682a68b29a882df0545c143dc3646daefe80ba479bcdede94d5a703de2871e2" dependencies = [ "futures-core", "futures-sink", @@ -575,9 +621,9 @@ dependencies = [ [[package]] name = "futures-core" -version = "0.3.13" +version = "0.3.15" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = 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[[package]] name = "getrandom" -version = "0.1.14" +version = "0.1.16" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "7abc8dd8451921606d809ba32e95b6111925cd2906060d2dcc29c070220503eb" +checksum = "8fc3cb4d91f53b50155bdcfd23f6a4c39ae1969c2ae85982b135750cccaf5fce" dependencies = [ - "cfg-if 0.1.10", + "cfg-if 1.0.0", "libc", - "wasi", + "wasi 0.9.0+wasi-snapshot-preview1", +] + +[[package]] +name = "getrandom" +version = "0.2.3" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "7fcd999463524c52659517fe2cea98493cfe485d10565e7b0fb07dbba7ad2753" +dependencies = [ + "cfg-if 1.0.0", + "libc", + "wasi 0.10.2+wasi-snapshot-preview1", ] [[package]] @@ -696,9 +751,9 @@ dependencies = [ [[package]] name = "heck" -version = "0.3.1" +version = "0.3.3" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "20564e78d53d2bb135c343b3f47714a56af2061f1c928fdb541dc7b9fdd94205" +checksum = 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] [[package]] name = "log" -version = "0.4.11" +version = "0.4.14" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "4fabed175da42fed1fa0746b0ea71f412aa9d35e76e95e59b192c64b9dc2bf8b" +checksum = "51b9bbe6c47d51fc3e1a9b945965946b4c44142ab8792c50835a980d362c2710" dependencies = [ - "cfg-if 0.1.10", + "cfg-if 1.0.0", ] [[package]] @@ -880,25 +947,19 @@ version = "0.1.8" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "7ffc5c5338469d4d3ea17d269fa8ea3512ad247247c30bd2df69e68309ed0a08" -[[package]] -name = "maybe-uninit" -version = "2.0.0" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "60302e4db3a61da70c0cb7991976248362f30319e88850c487b9b95bbf059e00" - [[package]] name = "memchr" -version = "2.3.3" +version = "2.4.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "3728d817d99e5ac407411fa471ff9800a778d88a24685968b36824eaf4bee400" +checksum = 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"proc-macro2", - "quote", - "syn", -] - [[package]] name = "pin-project-lite" version = "0.2.6" @@ -1165,9 +1213,9 @@ checksum = "8b870d8c151b6f2fb93e84a13146138f05d02ed11c7e7c54f8826aaaf7c9f184" [[package]] name = "pkg-config" -version = "0.3.18" +version = "0.3.19" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "d36492546b6af1463394d46f0c834346f31548646f6ba10849802c9c9a27ac33" +checksum = "3831453b3449ceb48b6d9c7ad7c96d5ea673e9b470a1dc578c2ce6521230884c" [[package]] name = "png" @@ -1183,15 +1231,15 @@ dependencies = [ [[package]] name = "ppv-lite86" -version = "0.2.8" +version = "0.2.10" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "237a5ed80e274dbc66f86bd59c1e25edc039660be53194b5fe0a482e0f2612ea" +checksum = "ac74c624d6b2d21f425f752262f42188365d7b8ff1aff74c82e45136510a4857" [[package]] name = "predicates" -version = "1.0.5" +version = "1.0.8" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = 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"62f02856753d04e03e26929f820d0a0a337ebe71f849801eea335d464b349080" +checksum = "c06aca804d41dbc8ba42dfd964f0d01334eceb64314b9ecf7c5fad5188a06d90" dependencies = [ - "autocfg 1.0.0", + "autocfg 1.0.1", "crossbeam-deque", "either", "rayon-core", @@ -1465,12 +1531,12 @@ dependencies = [ [[package]] name = "rayon-core" -version = "1.7.1" +version = "1.9.1" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "e92e15d89083484e11353891f1af602cc661426deb9564c298b270c726973280" +checksum = "d78120e2c850279833f1dd3582f730c4ab53ed95aeaaaa862a2a5c71b1656d8e" dependencies = [ + "crossbeam-channel", "crossbeam-deque", - "crossbeam-queue", "crossbeam-utils", "lazy_static", "num_cpus", @@ -1517,33 +1583,47 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "41cc0f7e4d5d4544e8861606a285bb08d3e70712ccc7d2b84d7c0ccfaf4b05ce" [[package]] -name = "redox_users" -version = "0.3.4" +name = "redox_syscall" +version = "0.2.8" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "09b23093265f8d200fa7b4c2c76297f47e681c655f6f1285a8780d6a022f7431" +checksum = "742739e41cd49414de871ea5e549afb7e2a3ac77b589bcbebe8c82fab37147fc" dependencies = [ - "getrandom", - "redox_syscall", + "bitflags 1.2.1", +] + +[[package]] +name = "redox_users" +version = "0.3.5" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "de0737333e7a9502c789a36d7c7fa6092a49895d4faa31ca5df163857ded2e9d" +dependencies = [ + "getrandom 0.1.16", + "redox_syscall 0.1.57", "rust-argon2", ] [[package]] name = "regex" -version = "1.3.9" +version = "1.5.4" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "9c3780fcf44b193bc4d09f36d2a3c87b251da4a046c87795a0d35f4f927ad8e6" +checksum = "d07a8629359eb56f1e2fb1652bb04212c072a87ba68546a04065d525673ac461" dependencies = [ "aho-corasick", "memchr", "regex-syntax", - "thread_local", ] [[package]] -name = "regex-syntax" -version = "0.6.18" +name = "regex-automata" +version = "0.1.10" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "26412eb97c6b088a6997e05f69403a802a92d520de2f8e63c2b65f9e0f47c4e8" +checksum = "6c230d73fb8d8c1b9c0b3135c5142a8acee3a0558fb8db5cf1cb65f8d7862132" + +[[package]] +name = "regex-syntax" +version = "0.6.25" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "f497285884f3fcff424ffc933e56d7cbca511def0c9831a7f9b5f6153e3cc89b" [[package]] name = "remove_dir_all" @@ -1564,16 +1644,17 @@ dependencies = [ [[package]] name = "rouille" -version = "3.0.0" +version = "3.1.1" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "112568052ec17fa26c6c11c40acbb30d3ad244bf3d6da0be181f5e7e42e5004f" +checksum = "0cfaebc11a52b7415f07e69f18f8240a0ea5eedf0dcb888c5fb7b432e7b4729b" dependencies = [ - "base64 0.9.3", + "base64 0.10.1", "chrono", "filetime", "multipart", "num_cpus", - "rand 0.5.6", + "percent-encoding", + "rand 0.7.3", "serde", "serde_derive", "serde_json", @@ -1587,11 +1668,11 @@ dependencies = [ [[package]] name = "rust-argon2" -version = "0.7.0" +version = "0.8.3" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "2bc8af4bda8e1ff4932523b94d3dd20ee30a87232323eda55903ffd71d2fb017" +checksum = "4b18820d944b33caa75a71378964ac46f58517c92b6ae5f762636247c09e78fb" dependencies = [ - "base64 0.11.0", + "base64 0.13.0", "blake2b_simd", "constant_time_eq", "crossbeam-utils", @@ -1606,9 +1687,9 @@ dependencies = [ [[package]] name = "rustc-demangle" -version = "0.1.16" +version = "0.1.19" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "4c691c0e608126e00913e33f0ccf3727d5fc84573623b8d65b2df340b5201783" +checksum = "410f7acf3cb3a44527c5d9546bad4bf4e6c460915d5f9f2fc524498bfe8f70ce" [[package]] name = "ryu" @@ -1662,18 +1743,18 @@ checksum = "d29ab0c6d3fc0ee92fe66e2d99f700eab17a8d57d1c1d3b748380fb20baa78cd" [[package]] name = "serde" -version = "1.0.114" +version = 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checksum = "0b8de496cf83d4ed58b6be86c3a275b8602f6ffe98d3024a869e124147a9a3ac" [[package]] name = "slab" -version = "0.4.2" +version = "0.4.3" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "c111b5bd5695e56cffe5129854aa230b39c93a305372fdbb2668ca2394eea9f8" +checksum = "f173ac3d1a7e3b28003f40de0b5ce7fe2710f9b9dc3fc38664cebee46b3b6527" [[package]] name = "socket2" -version = "0.3.12" +version = "0.4.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "03088793f677dce356f3ccc2edb1b314ad191ab702a5de3faf49304f7e104918" +checksum = "9e3dfc207c526015c632472a77be09cf1b6e46866581aecae5cc38fb4235dea2" dependencies = [ - "cfg-if 0.1.10", "libc", - "redox_syscall", "winapi", ] @@ -1727,6 +1806,12 @@ version = "0.1.4" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "4bf77cb82ba8453b42b6ae1d692e4cdc92f9a47beaf89a847c8be83f4e328ad3" +[[package]] +name = "static_assertions" +version = "1.1.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "a2eb9349b6444b326872e140eb1cf5e7c522154d69e7a0ffb0fb81c06b37543f" + [[package]] name = "strsim" version = "0.8.0" @@ -1735,15 +1820,15 @@ checksum = "8ea5119cdb4c55b55d432abb513a0429384878c15dde60cc77b1c99de1a95a6a" [[package]] name = "strsim" -version = "0.9.3" +version = "0.10.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "6446ced80d6c486436db5c078dde11a9f73d42b57fb273121e160b84f63d894c" +checksum = "73473c0e59e6d5812c5dfe2a064a6444949f089e20eec9a2e5506596494e4623" [[package]] name = "structopt" -version = "0.3.15" +version = "0.3.21" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "de2f5e239ee807089b62adce73e48c625e0ed80df02c7ab3f068f5db5281065c" +checksum = "5277acd7ee46e63e5168a80734c9f6ee81b1367a7d8772a2d765df2a3705d28c" dependencies = [ "clap", "lazy_static", @@ -1752,9 +1837,9 @@ dependencies = [ [[package]] name = "structopt-derive" -version = "0.4.8" +version = "0.4.14" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "510413f9de616762a4fbeab62509bf15c729603b72d7cd71280fbca431b1c118" +checksum = "5ba9cdfda491b814720b6b06e0cac513d922fc407582032e8706e9f137976f90" dependencies = [ "heck", "proc-macro-error", @@ -1765,9 +1850,9 @@ dependencies = [ [[package]] name = "syn" -version = "1.0.67" +version = "1.0.72" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "6498a9efc342871f91cc2d0d694c674368b4ceb40f62b65a7a08c3792935e702" +checksum = "a1e8cdbefb79a9a5a65e0db8b47b723ee907b7c7f8496c76a1770b5c310bab82" dependencies = [ "proc-macro2", "quote", @@ -1775,36 +1860,21 @@ dependencies = [ ] [[package]] -name = "syn-mid" -version = "0.5.0" +name = "tap" +version = "1.0.1" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "7be3539f6c128a931cf19dcee741c1af532c7fd387baa739c03dd2e96479338a" -dependencies = [ - "proc-macro2", - "quote", - "syn", -] - -[[package]] -name = "tempdir" -version = "0.3.7" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "15f2b5fb00ccdf689e0149d1b1b3c03fead81c2b37735d812fa8bddbbf41b6d8" -dependencies = [ - "rand 0.4.6", - "remove_dir_all", -] +checksum = "55937e1799185b12863d447f42597ed69d9928686b8d88a1df17376a097d8369" [[package]] name = "tempfile" -version = "3.1.0" +version = "3.2.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "7a6e24d9338a0a5be79593e2fa15a648add6138caa803e2d5bc782c371732ca9" +checksum = "dac1c663cfc93810f88aed9b8941d48cabf856a1b111c29a40439018d870eb22" dependencies = [ - "cfg-if 0.1.10", + "cfg-if 1.0.0", "libc", - "rand 0.7.3", - "redox_syscall", + "rand 0.8.3", + "redox_syscall 0.2.8", "remove_dir_all", "winapi", ] @@ -1822,9 +1892,9 @@ dependencies = [ [[package]] name = "termcolor" -version = "1.1.0" +version = "1.1.2" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "bb6bfa289a4d7c5766392812c0a1f4c1ba45afa1ad47803c11e1f407d846d75f" +checksum = "2dfed899f0eb03f32ee8c6a0aabdb8a7949659e3466561fc0adf54e26d88c5f4" dependencies = [ "winapi-util", ] @@ -1838,15 +1908,6 @@ dependencies = [ "unicode-width", ] -[[package]] -name = "thread_local" -version = "1.0.1" -source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "d40c6d1b69745a6ec6fb1ca717914848da4b44ae29d9b3080cbee91d72a69b14" -dependencies = [ - "lazy_static", -] - [[package]] name = "threadpool" version = "1.8.1" @@ -1868,22 +1929,31 @@ dependencies = [ [[package]] name = "tiny_http" -version = "0.6.2" +version = "0.8.2" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "1661fa0a44c95d01604bd05c66732a446c657efb62b5164a7a083a3b552b4951" +checksum = "9ce51b50006056f590c9b7c3808c3bd70f0d1101666629713866c227d6e58d39" dependencies = [ "ascii", "chrono", "chunked_transfer", - "log 0.4.11", + "log 0.4.14", "url", ] [[package]] name = "tinyvec" -version = "0.3.3" +version = "1.2.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "53953d2d3a5ad81d9f844a32f14ebb121f50b650cd59d0ee2a07cf13c617efed" +checksum = "5b5220f05bb7de7f3f53c7c065e1199b3172696fe2db9f9c4d8ad9b4ee74c342" +dependencies = [ + "tinyvec_macros", +] + +[[package]] +name = "tinyvec_macros" +version = "0.1.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "cda74da7e1a664f795bb1f8a87ec406fb89a02522cf6e50620d016add6dbbf5c" [[package]] name = "todomvc" @@ -1898,9 +1968,9 @@ dependencies = [ [[package]] name = "toml" -version = "0.5.6" +version = "0.5.8" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "ffc92d160b1eef40665be3a05630d003936a3bc7da7421277846c2613e92c71a" +checksum = "a31142970826733df8241ef35dc040ef98c679ab14d7c3e54d827099b3acecaa" dependencies = [ "serde", ] @@ -1913,9 +1983,9 @@ checksum = "a7f741b240f1a48843f9b8e0444fb55fb2a4ff67293b50a9179dfd5ea67f8d41" [[package]] name = "trybuild" -version = "1.0.31" +version = "1.0.42" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "7a4d94e6adf00b96b1ab94fcfcd8c3cf916733b39adf90c8f72693629887b9b8" +checksum = "1768998d9a3b179411618e377dbb134c58a88cda284b0aa71c42c40660127d46" dependencies = [ "glob", "lazy_static", @@ -1954,27 +2024,27 @@ dependencies = [ [[package]] name = "unicode-bidi" -version = "0.3.4" +version = "0.3.5" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "49f2bd0c6468a8230e1db229cff8029217cf623c767ea5d60bfbd42729ea54d5" +checksum = "eeb8be209bb1c96b7c177c7420d26e04eccacb0eeae6b980e35fcb74678107e0" dependencies = [ "matches", ] [[package]] name = "unicode-normalization" -version = "0.1.13" +version = "0.1.19" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "6fb19cf769fa8c6a80a162df694621ebeb4dafb606470b2b2fce0be40a98a977" +checksum = "d54590932941a9e9266f0832deed84ebe1bf2e4c9e4a3554d393d18f5e854bf9" dependencies = [ "tinyvec", ] [[package]] name = "unicode-segmentation" -version = "1.6.0" +version = "1.7.1" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "e83e153d1053cbb5a118eeff7fd5be06ed99153f00dbcd8ae310c5fb2b22edc0" +checksum = "bb0d2e7be6ae3a5fa87eed5fb451aff96f2573d2694942e40543ae0bbe19c796" [[package]] name = "unicode-width" @@ -1984,26 +2054,27 @@ checksum = "9337591893a19b88d8d87f2cec1e73fad5cdfd10e5a6f349f498ad6ea2ffb1e3" [[package]] name = "unicode-xid" -version = "0.2.1" +version = "0.2.2" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "f7fe0bb3479651439c9112f72b6c505038574c9fbb575ed1bf3b797fa39dd564" +checksum = "8ccb82d61f80a663efe1f787a51b16b5a51e3314d6ac365b08639f52387b33f3" [[package]] name = "url" -version = "1.7.2" +version = "2.2.2" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "dd4e7c0d531266369519a4aa4f399d748bd37043b00bde1e4ff1f60a120b355a" +checksum = "a507c383b2d33b5fc35d1861e77e6b383d158b2da5e14fe51b83dfedf6fd578c" dependencies = [ + "form_urlencoded", "idna", "matches", - "percent-encoding 1.0.1", + "percent-encoding", ] [[package]] name = "vcpkg" -version = "0.2.10" +version = "0.2.13" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "6454029bf181f092ad1b853286f23e2c507d8e8194d01d92da4a55c274a5508c" +checksum = "025ce40a007e1907e58d5bc1a594def78e5573bb0b1160bc389634e8f12e4faa" [[package]] name = "vec_map" @@ -2019,9 +2090,9 @@ checksum = "914b1a6776c4c929a602fafd8bc742e06365d4bcbe48c30f9cca5824f70dc9dd" [[package]] name = "version_check" -version = "0.9.2" +version = "0.9.3" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "b5a972e5669d67ba988ce3dc826706fb0a8b01471c088cb0b6110b805cc36aed" +checksum = "5fecdca9a5291cc2b8dcf7dc02453fee791a280f3743cb0905f8822ae463b3fe" [[package]] name = "wait-timeout" @@ -2034,24 +2105,24 @@ dependencies = [ [[package]] name = "walrus" -version = "0.18.0" +version = "0.19.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "4d470d0583e65f4cab21a1ff3c1ba3dd23ae49e68f516f0afceaeb001b32af39" +checksum = "4eb08e48cde54c05f363d984bb54ce374f49e242def9468d2e1b6c2372d291f8" dependencies = [ "anyhow", "id-arena", "leb128", - "log 0.4.11", + "log 0.4.14", "rayon", "walrus-macro", - "wasmparser 0.59.0", + "wasmparser 0.77.0", ] [[package]] name = "walrus-macro" -version = "0.18.0" +version = "0.19.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "d7c2bb690b44cb1b0fdcc54d4998d21f8bdaf706b93775425e440b174f39ad16" +checksum = "0a6e5bd22c71e77d60140b0bd5be56155a37e5bd14e24f5f87298040d0cc40d7" dependencies = [ "heck", "proc-macro2", @@ -2065,9 +2136,15 @@ version = "0.9.0+wasi-snapshot-preview1" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "cccddf32554fecc6acb585f82a32a72e28b48f8c4c1883ddfeeeaa96f7d8e519" +[[package]] +name = "wasi" +version = "0.10.2+wasi-snapshot-preview1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "fd6fbd9a79829dd1ad0cc20627bf1ed606756a7f77edff7b66b7064f9cb327c6" + [[package]] name = "wasm-bindgen" -version = "0.2.73" +version = "0.2.74" dependencies = [ "cfg-if 1.0.0", "js-sys", @@ -2083,11 +2160,11 @@ dependencies = [ [[package]] name = "wasm-bindgen-backend" -version = "0.2.73" +version = "0.2.74" dependencies = [ "bumpalo", "lazy_static", - "log 0.4.11", + "log 0.4.14", "proc-macro2", "quote", "syn", @@ -2104,7 +2181,7 @@ dependencies = [ [[package]] name = "wasm-bindgen-cli" -version = "0.2.73" +version = "0.2.74" dependencies = [ "anyhow", "assert_cmd", @@ -2112,7 +2189,7 @@ dependencies = [ "diff", "docopt", "env_logger", - "log 0.4.11", + "log 0.4.14", "openssl", "predicates", "rayon", @@ -2132,11 +2209,11 @@ dependencies = [ [[package]] name = "wasm-bindgen-cli-support" -version = "0.2.73" +version = "0.2.74" dependencies = [ "anyhow", "base64 0.9.3", - "log 0.4.11", + "log 0.4.14", "rustc-demangle", "serde_json", "tempfile", @@ -2154,19 +2231,19 @@ dependencies = [ [[package]] name = "wasm-bindgen-externref-xform" -version = "0.2.73" +version = "0.2.74" dependencies = [ "anyhow", "rayon", "walrus", "wasmprinter", - "wast", + "wast 21.0.0", "wat", ] [[package]] name = "wasm-bindgen-futures" -version = "0.4.23" +version = "0.4.24" dependencies = [ "cfg-if 1.0.0", "futures-channel-preview", @@ -2180,7 +2257,7 @@ dependencies = [ [[package]] name = "wasm-bindgen-macro" -version = "0.2.73" +version = "0.2.74" dependencies = [ "quote", "trybuild", @@ -2191,7 +2268,7 @@ dependencies = [ [[package]] name = "wasm-bindgen-macro-support" -version = "0.2.73" +version = "0.2.74" dependencies = [ "proc-macro2", "quote", @@ -2202,13 +2279,13 @@ dependencies = [ [[package]] name = "wasm-bindgen-multi-value-xform" -version = "0.2.73" +version = "0.2.74" dependencies = [ "anyhow", "rayon", "walrus", "wasmprinter", - "wast", + "wast 21.0.0", "wat", ] @@ -2223,11 +2300,11 @@ dependencies = [ [[package]] name = "wasm-bindgen-shared" -version = "0.2.73" +version = "0.2.74" [[package]] name = "wasm-bindgen-test" -version = "0.3.23" +version = "0.3.24" dependencies = [ "console_error_panic_hook", "js-sys", @@ -2253,7 +2330,7 @@ dependencies = [ [[package]] name = "wasm-bindgen-test-macro" -version = "0.3.23" +version = "0.3.24" dependencies = [ "proc-macro2", "quote", @@ -2261,7 +2338,7 @@ dependencies = [ [[package]] name = "wasm-bindgen-threads-xform" -version = "0.2.73" +version = "0.2.74" dependencies = [ "anyhow", "walrus", @@ -2270,7 +2347,7 @@ dependencies = [ [[package]] name = "wasm-bindgen-wasm-conventions" -version = "0.2.73" +version = "0.2.74" dependencies = [ "anyhow", "walrus", @@ -2278,10 +2355,10 @@ dependencies = [ [[package]] name = "wasm-bindgen-wasm-interpreter" -version = "0.2.73" +version = "0.2.74" dependencies = [ "anyhow", - "log 0.4.11", + "log 0.4.14", "tempfile", "walrus", "wasm-bindgen-wasm-conventions", @@ -2290,13 +2367,13 @@ dependencies = [ [[package]] name = "wasm-bindgen-webidl" -version = "0.2.73" +version = "0.2.74" dependencies = [ "anyhow", "env_logger", "heck", "lazy_static", - "log 0.4.11", + "log 0.4.14", "proc-macro2", "quote", "sourcefile", @@ -2324,6 +2401,15 @@ dependencies = [ "wasm-bindgen-futures", ] +[[package]] +name = "wasm-in-web-worker" +version = "0.1.0" +dependencies = [ + "console_error_panic_hook", + "wasm-bindgen", + "web-sys", +] + [[package]] name = "wasm2js" version = "0.1.0" @@ -2339,18 +2425,24 @@ checksum = "a950e6a618f62147fd514ff445b2a0b53120d382751960797f85f058c7eda9b9" [[package]] name = "wasmparser" -version = "0.60.2" +version = "0.77.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "c2d5790a08f11f3d6b5767f6c49152df74b215e3dc5a38147713c4f6a05aac7f" +checksum = "b35c86d22e720a07d954ebbed772d01180501afe7d03d464f413bb5f8914a8d6" + +[[package]] +name = "wasmparser" +version = "0.78.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "52144d4c78e5cf8b055ceab8e5fa22814ce4315d6002ad32cfd914f37c12fd65" [[package]] name = "wasmprinter" -version = "0.2.7" +version = "0.2.26" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "ecc836dba85dd00df43d71b22063bcb367d324aa1be0d046077cc7fca4c43876" +checksum = "2ccec894c70710c2e4669320a532cb2b9cfb97adb0429745642f8ce76916ed85" dependencies = [ "anyhow", - "wasmparser 0.60.2", + "wasmparser 0.78.2", ] [[package]] @@ -2363,17 +2455,26 @@ dependencies = [ ] [[package]] -name = "wat" -version = "1.0.22" +name = "wast" +version = "35.0.2" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "ce85d72b74242c340e9e3492cfb602652d7bb324c3172dd441b5577e39a2e18c" +checksum = "2ef140f1b49946586078353a453a1d28ba90adfc54dde75710bc1931de204d68" dependencies = [ - "wast", + "leb128", +] + +[[package]] +name = "wat" +version = "1.0.37" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "8ec280a739b69173e0ffd12c1658507996836ba4e992ed9bc1e5385a0bd72a02" +dependencies = [ + "wast 35.0.2", ] [[package]] name = "web-sys" -version = "0.3.50" +version = "0.3.51" dependencies = [ "js-sys", "wasm-bindgen", @@ -2447,7 +2548,7 @@ version = "0.12.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "610950904727748ca09682e857f0d6d6437f0ca862f32f9229edba8cec8b2635" dependencies = [ - "nom", + "nom 5.1.2", ] [[package]] @@ -2517,7 +2618,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "33358e95c77d660f1c7c07f4a93c2bd89768965e844e3c50730bb4b42658df5f" dependencies = [ "anyhow", - "wast", + "wast 21.0.0", "wit-writer", ] @@ -2535,9 +2636,9 @@ dependencies = [ [[package]] name = "wit-walrus" -version = "0.5.0" +version = "0.6.0" source = "registry+https://github.com/rust-lang/crates.io-index" -checksum = "b532d7bc47d02a08463adc934301efbf67e7b1e1284f8a68edc85d1ca84fa125" +checksum = "ad559e3e4c6404b2a6a675d44129d62a3836e3b951b90112fa1c5feb852757cd" dependencies = [ "anyhow", "id-arena", @@ -2572,3 +2673,9 @@ dependencies = [ "wasm-bindgen", "web-sys", ] + +[[package]] +name = "wyz" +version = "0.2.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "85e60b0d1b5f99db2556934e21937020776a5d31520bf169e851ac44e6420214" diff --git a/third_party/nixpkgs/pkgs/development/tools/wasm-bindgen-cli/default.nix b/third_party/nixpkgs/pkgs/development/tools/wasm-bindgen-cli/default.nix index a52f7b6550..ef8affdf24 100644 --- a/third_party/nixpkgs/pkgs/development/tools/wasm-bindgen-cli/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/wasm-bindgen-cli/default.nix @@ -1,10 +1,17 @@ -{ rustPlatform, fetchFromGitHub, lib, openssl, pkg-config, stdenv, curl, Security +{ rustPlatform +, fetchFromGitHub +, lib +, openssl +, pkg-config +, stdenv +, curl +, Security , runCommand }: rustPlatform.buildRustPackage rec { pname = "wasm-bindgen-cli"; - version = "0.2.73"; + version = "0.2.74"; src = let @@ -12,9 +19,10 @@ rustPlatform.buildRustPackage rec { owner = "rustwasm"; repo = "wasm-bindgen"; rev = version; - sha256 = "sha256-JrfS9Z/ZqhoZXJxrxMSLpl2NiktTUkjW6q3xN9AU2zw="; + hash = "sha256-GsraYfWzUZjFpPpufTyXF0i2llBzjh04iTKio6m4NRA="; }; - in runCommand "source" { } '' + in + runCommand "source" { } '' cp -R ${tarball} $out chmod -R +w $out cp ${./Cargo.lock} $out/Cargo.lock @@ -23,7 +31,7 @@ rustPlatform.buildRustPackage rec { buildInputs = [ openssl ] ++ lib.optionals stdenv.isDarwin [ Security curl ]; nativeBuildInputs = [ pkg-config ]; - cargoSha256 = "sha256-GUdoOms4FrNmPkELFX1PXcU/ww7CSN8JGHoCvnm73PQ="; + cargoHash = "sha256-djeI7kSGRHMpXnsbVlM2CDek02u5tFAsyAdHwbKC0y8="; cargoBuildFlags = [ "-p" pname ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/tools/wiggle/default.nix b/third_party/nixpkgs/pkgs/development/tools/wiggle/default.nix index d360500e1f..6d1622c5b8 100644 --- a/third_party/nixpkgs/pkgs/development/tools/wiggle/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/wiggle/default.nix @@ -1,12 +1,14 @@ -{ lib, stdenv, fetchurl, ncurses, groff }: +{ lib, stdenv, fetchFromGitHub, ncurses, groff }: -stdenv.mkDerivation { +stdenv.mkDerivation rec { + name = "wiggle"; + version = "1.3"; - name = "wiggle-1.3"; - - src = fetchurl { - url = "https://github.com/neilbrown/wiggle/archive/v1.3.tar.gz"; - sha256 = "sha256-/5LPATPB9NzjNWPiY8sw59229KvfhtQnsewUkL7CWvo="; + src = fetchFromGitHub { + owner = "neilbrown"; + repo = "wiggle"; + rev = "v${version}"; + sha256 = "sha256-rlHhYzP81lfblZvtZ1lhiq4iQ6WRpBYukoGqpVP+NKI="; }; buildInputs = [ ncurses groff ]; @@ -21,24 +23,22 @@ stdenv.mkDerivation { patchShebangs . ''; - meta = { - homepage = "http://blog.neil.brown.name/category/wiggle/"; + meta = with lib; { + homepage = "https://blog.neil.brown.name/category/wiggle/"; description = "Tool for applying patches with conflicts"; - longDescription = '' - Wiggle applies patches to a file in a similar manner to the patch(1) - program. The distinctive difference is, however, that wiggle will - attempt to apply a patch even if the "before" part of the patch doesn't - match the target file perfectly. This is achieved by breaking the file - and patch into words and finding the best alignment of words in the file - with words in the patch. Once this alignment has been found, any - differences (word-wise) in the patch are applied to the file as best as - possible. Also, wiggle will (in some cases) detect changes that have - already been applied, and will ignore them. + Wiggle applies patches to a file in a similar manner to the patch(1) + program. The distinctive difference is, however, that wiggle will + attempt to apply a patch even if the "before" part of the patch doesn't + match the target file perfectly. This is achieved by breaking the file + and patch into words and finding the best alignment of words in the file + with words in the patch. Once this alignment has been found, any + differences (word-wise) in the patch are applied to the file as best as + possible. Also, wiggle will (in some cases) detect changes that have + already been applied, and will ignore them. ''; - - license = lib.licenses.gpl2Plus; - platforms = lib.platforms.all; + license = licenses.gpl2Plus; + platforms = platforms.all; + maintainers = [ ]; }; - } diff --git a/third_party/nixpkgs/pkgs/development/tools/yarn2nix-moretea/yarn2nix/default.nix b/third_party/nixpkgs/pkgs/development/tools/yarn2nix-moretea/yarn2nix/default.nix index cd195cc4d6..24ef1e8575 100644 --- a/third_party/nixpkgs/pkgs/development/tools/yarn2nix-moretea/yarn2nix/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/yarn2nix-moretea/yarn2nix/default.nix @@ -228,6 +228,7 @@ in rec { yarnNix ? mkYarnNix { inherit yarnLock; }, yarnFlags ? defaultYarnFlags, yarnPreBuild ? "", + yarnPostBuild ? "", pkgConfig ? {}, extraBuildInputs ? [], publishBinsFor ? null, @@ -249,6 +250,7 @@ in rec { deps = mkYarnModules { name = "${safeName}-modules-${version}"; preBuild = yarnPreBuild; + postBuild = yarnPostBuild; workspaceDependencies = workspaceDependenciesTransitive; inherit packageJSON pname version yarnLock yarnNix yarnFlags pkgConfig; }; diff --git a/third_party/nixpkgs/pkgs/development/tools/zls/default.nix b/third_party/nixpkgs/pkgs/development/tools/zls/default.nix index 0c9a715e9b..0fbe7bc311 100644 --- a/third_party/nixpkgs/pkgs/development/tools/zls/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/zls/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "zls"; - version = "0.1.0"; + version = "unstable-2021-06-06"; src = fetchFromGitHub { owner = "zigtools"; repo = pname; - rev = version; - sha256 = "sha256-A4aOdmlIxBUeKyczzLxH4y1Rl9TgE1EeiKGbWY4p/00="; + rev = "39d87188647bd8c8eed304ee18f2dd1df6942f60"; + sha256 = "sha256-22N508sVkP1OLySAijhtTPzk2fGf+FVnX9LTYRbRpB4="; fetchSubmodules = true; }; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { ''; installPhase = '' - zig build -Drelease-safe -Dtarget=${stdenv.hostPlatform.parsed.cpu.name}-native --prefix $out install + zig build -Drelease-safe -Dcpu=baseline --prefix $out install ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/development/tools/zprint/default.nix b/third_party/nixpkgs/pkgs/development/tools/zprint/default.nix index 7020128062..266ac83b80 100644 --- a/third_party/nixpkgs/pkgs/development/tools/zprint/default.nix +++ b/third_party/nixpkgs/pkgs/development/tools/zprint/default.nix @@ -24,6 +24,7 @@ stdenv.mkDerivation rec { -H:Name=${pname} \ -H:EnableURLProtocols=https,http \ -H:+ReportExceptionStackTraces \ + ${lib.optionalString stdenv.isDarwin ''-H:-CheckToolchain''} \ --report-unsupported-elements-at-runtime \ --initialize-at-build-time \ --no-fallback diff --git a/third_party/nixpkgs/pkgs/development/web/cypress/default.nix b/third_party/nixpkgs/pkgs/development/web/cypress/default.nix index 9b84f9897f..9563563bc4 100644 --- a/third_party/nixpkgs/pkgs/development/web/cypress/default.nix +++ b/third_party/nixpkgs/pkgs/development/web/cypress/default.nix @@ -1,12 +1,12 @@ -{ stdenv, lib, fetchzip, autoPatchelfHook, xorg, gtk2, gnome2, gtk3, nss, alsaLib, udev, unzip, wrapGAppsHook, mesa }: +{ stdenv, lib, fetchzip, autoPatchelfHook, xorg, gtk2, gnome2, gtk3, nss, alsa-lib, udev, unzip, wrapGAppsHook, mesa }: stdenv.mkDerivation rec { pname = "cypress"; - version = "7.4.0"; + version = "7.5.0"; src = fetchzip { url = "https://cdn.cypress.io/desktop/${version}/linux-x64/cypress.zip"; - sha256 = "1xhjmn6cwpdph12k4gbl2f1v72bp689779l5i16i90i01m31kwjp"; + sha256 = "07i475b17v8qazdq6qzjqsdfpvhg1b8x1p5a51hwhcxaym3p5njj"; }; passthru.updateScript = ./update.sh; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { buildInputs = with xorg; [ libXScrnSaver libXdamage libXtst libxshmfence ] ++ [ - nss gtk2 alsaLib gnome2.GConf gtk3 + nss gtk2 alsa-lib gnome2.GConf gtk3 mesa # for libgbm ]; diff --git a/third_party/nixpkgs/pkgs/development/web/deno/default.nix b/third_party/nixpkgs/pkgs/development/web/deno/default.nix index 08c69dde39..85f7c294e9 100644 --- a/third_party/nixpkgs/pkgs/development/web/deno/default.nix +++ b/third_party/nixpkgs/pkgs/development/web/deno/default.nix @@ -17,15 +17,15 @@ rustPlatform.buildRustPackage rec { pname = "deno"; - version = "1.10.3"; + version = "1.11.2"; src = fetchFromGitHub { owner = "denoland"; repo = pname; rev = "v${version}"; - sha256 = "sha256-25FfxGtPZ+KQCmXur6pwrb1l/xjCWgw69CMLPihnhAU="; + sha256 = "sha256-/dy+jAm9TioDF8rZtLNFlKcu7ASzvvoVq4dun4gkiCA="; }; - cargoSha256 = "sha256-CopfdjafWAhpbrdYSHJjKHKCLw94TSaiSAH4CVFOHi8="; + cargoSha256 = "sha256-AUNDwbiGHiA+GADnLo/CmKAMhv68BPnvXsZaWacDJ2Y="; # Install completions post-install nativeBuildInputs = [ installShellFiles ]; diff --git a/third_party/nixpkgs/pkgs/development/web/deno/librusty_v8.nix b/third_party/nixpkgs/pkgs/development/web/deno/librusty_v8.nix index 8ae163f2c9..6ae0de15c7 100644 --- a/third_party/nixpkgs/pkgs/development/web/deno/librusty_v8.nix +++ b/third_party/nixpkgs/pkgs/development/web/deno/librusty_v8.nix @@ -11,11 +11,11 @@ let }; in fetch_librusty_v8 { - version = "0.22.2"; + version = "0.22.3"; shas = { - x86_64-linux = "sha256-bLGSt9a+drzXMy64iiERFHfdDsIR2YqwwNlkpzIM07Q="; - aarch64-linux = "sha256-MtCB7XaFho+a64fidPO88URIq7X9HvGqN5a9hzuCX4s="; - x86_64-darwin = "sha256-aLeZ0cIdmQHDxSGPx6IBwweZWwDI/m/1kFQTC7dQ3bs="; - aarch64-darwin = "sha256-SZGx/kRvp88mfMqDX+d4GNDs4t+P383kjnNPqwkqkHI="; + x86_64-linux = "sha256-RS1fUuTm6zhln67ank6Sit9nhGyKij1UsJ77ezffCh8="; + aarch64-linux = "sha256-E7SSFYODO8diPmEvpJyzAcltrh7YUXhWlqsRytFRmtA="; + x86_64-darwin = "sha256-29XTC7RoUDNJq46WkLCQT1vCuv4dzBrp8no6vVCsQ2g="; + aarch64-darwin = "sha256-UZHhKUjWQGklH26z2Kc2J7VwlV83LWl5n3YZt5ryKrY="; }; } diff --git a/third_party/nixpkgs/pkgs/development/web/flyctl/default.nix b/third_party/nixpkgs/pkgs/development/web/flyctl/default.nix index f531c9a902..130ff9c9bc 100644 --- a/third_party/nixpkgs/pkgs/development/web/flyctl/default.nix +++ b/third_party/nixpkgs/pkgs/development/web/flyctl/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "flyctl"; - version = "0.0.220"; + version = "0.0.227"; src = fetchFromGitHub { owner = "superfly"; repo = "flyctl"; rev = "v${version}"; - sha256 = "sha256-QuNe2Q7d0WSF3pkDNKxs6b6hO9Q99oJM+ZddHD/tOaI="; + sha256 = "sha256-nql0zK2H0FDQMsnSJSNzC7YmvUZfITHH5p1efFHsj58="; }; preBuild = '' @@ -17,7 +17,7 @@ buildGoModule rec { subPackages = [ "." ]; - vendorSha256 = "sha256-zoheYyeofg8oVRicnZt+lFOixIH/Ssv7Kh7zC6yT/uY="; + vendorSha256 = "sha256-NnHnSfm3XYiwgGn56GsthFKiflJvhYhjoxmm8ogm+Uc="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/development/web/insomnia/default.nix b/third_party/nixpkgs/pkgs/development/web/insomnia/default.nix index 1c854368df..3ba900f3f6 100644 --- a/third_party/nixpkgs/pkgs/development/web/insomnia/default.nix +++ b/third_party/nixpkgs/pkgs/development/web/insomnia/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, makeWrapper, fetchurl, dpkg, alsaLib, atk, cairo, cups, dbus, expat +{ lib, stdenv, makeWrapper, fetchurl, dpkg, alsa-lib, atk, cairo, cups, dbus, expat , fontconfig, freetype, gdk-pixbuf, glib, gnome2, pango, mesa, nspr, nss, gtk3, gtk2 , at-spi2-atk, gsettings-desktop-schemas, gobject-introspection, wrapGAppsHook , libX11, libXScrnSaver, libXcomposite, libXcursor, libXdamage, libXext @@ -28,7 +28,7 @@ in stdenv.mkDerivation rec { [ autoPatchelfHook dpkg makeWrapper gobject-introspection wrapGAppsHook ]; buildInputs = [ - alsaLib + alsa-lib at-spi2-atk atk cairo diff --git a/third_party/nixpkgs/pkgs/development/web/nodejs/v14.nix b/third_party/nixpkgs/pkgs/development/web/nodejs/v14.nix index 7054e4c66b..27b2a4f331 100644 --- a/third_party/nixpkgs/pkgs/development/web/nodejs/v14.nix +++ b/third_party/nixpkgs/pkgs/development/web/nodejs/v14.nix @@ -1,14 +1,13 @@ -{ callPackage, icu68, python3, lib, stdenv, enableNpm ? true }: +{ callPackage, python3, lib, stdenv, enableNpm ? true }: let buildNodejs = callPackage ./nodejs.nix { - icu = icu68; python = python3; }; in buildNodejs { inherit enableNpm; - version = "14.17.0"; - sha256 = "1vf989canwcx0wdpngvkbz2x232yccp7fzs1vcbr60rijgzmpq2n"; + version = "14.17.1"; + sha256 = "0zr4b9gja8f9611rnmc9yacmh90bd76xv9ayikcyqdfzdpax5wfx"; patches = lib.optional stdenv.isDarwin ./bypass-xcodebuild.diff; } diff --git a/third_party/nixpkgs/pkgs/development/web/nodejs/v16.nix b/third_party/nixpkgs/pkgs/development/web/nodejs/v16.nix index a97f3383a6..8514baec8b 100644 --- a/third_party/nixpkgs/pkgs/development/web/nodejs/v16.nix +++ b/third_party/nixpkgs/pkgs/development/web/nodejs/v16.nix @@ -8,6 +8,6 @@ let in buildNodejs { inherit enableNpm; - version = "16.3.0"; - sha256 = "0pxcdy9i1iyxp4afmpaz30ajlwrj74y64jl3n9rjqw0r5jw4gavs"; + version = "16.4.0"; + sha256 = "07f8g3hs0v7nsdvzlsr1p4pzgb04qn54pnhmbdsgmmb41cp227pr"; } diff --git a/third_party/nixpkgs/pkgs/development/web/postman/default.nix b/third_party/nixpkgs/pkgs/development/web/postman/default.nix index b8763c9432..6eb7eb1b58 100644 --- a/third_party/nixpkgs/pkgs/development/web/postman/default.nix +++ b/third_party/nixpkgs/pkgs/development/web/postman/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, makeDesktopItem, wrapGAppsHook -, atk, at-spi2-atk, at-spi2-core, alsaLib, cairo, cups, dbus, expat, gdk-pixbuf, glib, gtk3 +, atk, at-spi2-atk, at-spi2-core, alsa-lib, cairo, cups, dbus, expat, gdk-pixbuf, glib, gtk3 , freetype, fontconfig, nss, nspr, pango, udev, libuuid, libX11, libxcb, libXi , libXcursor, libXdamage, libXrandr, libXcomposite, libXext, libXfixes , libXrender, libXtst, libXScrnSaver, libdrm, mesa @@ -33,7 +33,7 @@ stdenv.mkDerivation rec { atk at-spi2-atk at-spi2-core - alsaLib + alsa-lib cairo cups dbus diff --git a/third_party/nixpkgs/pkgs/development/web/protege-distribution/default.nix b/third_party/nixpkgs/pkgs/development/web/protege-distribution/default.nix new file mode 100644 index 0000000000..3b885e6515 --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/web/protege-distribution/default.nix @@ -0,0 +1,76 @@ +{ lib, stdenv, fetchurl, unzip, jre8 +, copyDesktopItems +, makeDesktopItem +, iconConvTools +}: + +stdenv.mkDerivation rec { + pname = "protege-distribution"; + version = "5.5.0"; + + src = fetchurl { + url = "https://github.com/protegeproject/protege-distribution/releases/download/v${version}/Protege-${version}-platform-independent.zip"; + sha256 = "092x22wyisdnhccx817mqq15sxqdfc7iz4whr4mbvzrd9di6ipjq"; + }; + + nativeBuildInputs = [ unzip copyDesktopItems iconConvTools ]; + + patches = [ + # Replace logic for searching the install directory with a static cd into $out + ./static-path.patch + # Disable console logging, maintaining only file-based logging + ./disable-console-log.patch + ]; + + postPatch = '' + # Resolve @out@ (introduced by "static-path.patch") to $out, and set the + # correct Java executable (Protege is a JRE 8 application) + substituteInPlace run.sh \ + --subst-var-by out $out \ + --replace "java -X" "exec ${jre8.outPath}/bin/java -X" + ''; + + dontConfigure = true; + dontBuild = true; + + installPhase = '' + runHook preInstall + + mkdir $out + + # Delete non-Linux launch scripts + rm run.{bat,command} + + # Move launch script into /bin, giving it a recognizable name + install -D run.sh $out/bin/run-protege + + # Generate and copy icons to where they can be found + icoFileToHiColorTheme app/Protege.ico protege $out + + # Move everything else under protege/ + mkdir $out/protege + mv {bin,bundles,conf,plugins} $out/protege + + runHook postInstall + ''; + + desktopItems = [ + (makeDesktopItem { + name = "Protege"; + desktopName = "Protege Desktop"; + icon = "protege"; + comment = "OWL2 ontology editor"; + categories = "Development"; + exec = "run-protege"; + }) + ]; + + meta = with lib; { + description = "The OWL2 ontology editor from Stanford, with third-party plugins included"; + homepage = "https://protege.stanford.edu/"; + downloadPage = "https://protege.stanford.edu/products.php#desktop-protege"; + maintainers = with maintainers; [ nessdoor ]; + license = with licenses; [ asl20 bsd2 epl10 lgpl3 ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/development/web/protege-distribution/disable-console-log.patch b/third_party/nixpkgs/pkgs/development/web/protege-distribution/disable-console-log.patch new file mode 100644 index 0000000000..edd6277ffa --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/web/protege-distribution/disable-console-log.patch @@ -0,0 +1,28 @@ +--- a/conf/logback.xml 2021-06-25 00:49:10.446416341 +0900 ++++ b/conf/logback.xml 2021-06-25 00:50:32.889120465 +0900 +@@ -1,13 +1,6 @@ + + + +- +- +- %highlight(%msg) %n +- +- +- +- + + ${user.home}/.Protege/logs/protege.log + true +@@ -18,9 +11,8 @@ + + + +- + + + + +- +\ No newline at end of file ++ diff --git a/third_party/nixpkgs/pkgs/development/web/protege-distribution/static-path.patch b/third_party/nixpkgs/pkgs/development/web/protege-distribution/static-path.patch new file mode 100644 index 0000000000..66762f70ca --- /dev/null +++ b/third_party/nixpkgs/pkgs/development/web/protege-distribution/static-path.patch @@ -0,0 +1,16 @@ +--- a/run.sh 2021-06-24 22:30:20.764897745 +0900 ++++ b/run.sh 2021-06-24 22:29:47.211210142 +0900 +@@ -1,12 +1,6 @@ + #!/usr/bin/env bash + +-SOURCE="${BASH_SOURCE[0]}" +-while [ -h "$SOURCE" ]; do # resolve $SOURCE until the file is no longer a symlink +- DIR="$( cd -P "$( dirname "$SOURCE" )" && pwd )" +- SOURCE="$(readlink "$SOURCE")" +- [[ $SOURCE != /* ]] && SOURCE="$DIR/$SOURCE" # if $SOURCE was a relative symlink, we need to resolve it relative to the path where the symlink file was located +-done +-cd "$( cd -P "$( dirname "$SOURCE" )" && pwd )" ++cd @out@/protege + + java -Xmx500M -Xms200M \ + -Xss16M \ diff --git a/third_party/nixpkgs/pkgs/development/web/twitter-bootstrap/default.nix b/third_party/nixpkgs/pkgs/development/web/twitter-bootstrap/default.nix index 65625ca7d2..8e3fd36b73 100644 --- a/third_party/nixpkgs/pkgs/development/web/twitter-bootstrap/default.nix +++ b/third_party/nixpkgs/pkgs/development/web/twitter-bootstrap/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "bootstrap"; - version = "5.0.1"; + version = "5.0.2"; src = fetchurl { url = "https://github.com/twbs/bootstrap/releases/download/v${version}/${pname}-${version}-dist.zip"; - sha256 = "sha256-eep9s1YxTHeDDh+WhDMENho/N3AfJHVitis22bIGa6w="; + sha256 = "sha256-ZvvBNDF9sjcO4JnLPRkzC1B1YG3fcMyjM9qwFlAg9sE="; }; nativeBuildInputs = [ unzip ]; diff --git a/third_party/nixpkgs/pkgs/games/adom/default.nix b/third_party/nixpkgs/pkgs/games/adom/default.nix index dc4f1f47f7..b40a608412 100644 --- a/third_party/nixpkgs/pkgs/games/adom/default.nix +++ b/third_party/nixpkgs/pkgs/games/adom/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, patchelf, zlib, libmad, libpng12, libcaca, libGLU, libGL, alsaLib, libpulseaudio +{ lib, stdenv, fetchurl, patchelf, zlib, libmad, libpng12, libcaca, libGLU, libGL, alsa-lib, libpulseaudio , xorg }: let @@ -6,7 +6,7 @@ let inherit (xorg) libXext libX11; lpath = "${stdenv.cc.cc.lib}/lib64:" + lib.makeLibraryPath [ - zlib libmad libpng12 libcaca libXext libX11 libGLU libGL alsaLib libpulseaudio]; + zlib libmad libpng12 libcaca libXext libX11 libGLU libGL alsa-lib libpulseaudio]; in stdenv.mkDerivation rec { diff --git a/third_party/nixpkgs/pkgs/games/alienarena/default.nix b/third_party/nixpkgs/pkgs/games/alienarena/default.nix index 84badc8d85..39b232b267 100644 --- a/third_party/nixpkgs/pkgs/games/alienarena/default.nix +++ b/third_party/nixpkgs/pkgs/games/alienarena/default.nix @@ -1,12 +1,14 @@ -{ lib, stdenv, fetchurl, pkg-config, libjpeg, libX11, libXxf86vm, curl, libogg +{ lib, stdenv, fetchsvn, pkg-config, libjpeg, libX11, libXxf86vm, curl, libogg , libvorbis, freetype, openal, libGL }: -stdenv.mkDerivation { - name = "alienarena-7.65"; +stdenv.mkDerivation rec { + pname = "alienarena"; + version = "7.71.2"; - src = fetchurl { - url = "https://icculus.org/alienarena/Files/alienarena-7.65-linux20130207.tar.gz"; - sha256 = "03nnv4m2xmswr0020hssajncdb8sy95jp5yccsm53sgxga4r8igg"; + src = fetchsvn { + url = "svn://svn.icculus.org/alienarena/trunk"; + rev = "5673"; + sha256 = "1qfrgrp7nznk5n1jqvjba6l1w8y2ixzyx9swkpvd02rdwlwrp9kw"; }; nativeBuildInputs = [ pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/games/amoeba/default.nix b/third_party/nixpkgs/pkgs/games/amoeba/default.nix index d648ac85c6..61f5a5bf82 100644 --- a/third_party/nixpkgs/pkgs/games/amoeba/default.nix +++ b/third_party/nixpkgs/pkgs/games/amoeba/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, amoeba-data, alsaLib, expat, freetype, gtk2, libvorbis, libGLU, xorg, pkg-config }: +{ lib, stdenv, fetchurl, amoeba-data, alsa-lib, expat, freetype, gtk2, libvorbis, libGLU, xorg, pkg-config }: stdenv.mkDerivation rec { name = "amoeba-${version}-${debver}"; @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { ''; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib expat freetype gtk2 libvorbis libGLU xorg.libXxf86vm ]; + buildInputs = [ alsa-lib expat freetype gtk2 libvorbis libGLU xorg.libXxf86vm ]; installPhase = '' mkdir -p $out/bin $out/share/man/man1/ diff --git a/third_party/nixpkgs/pkgs/games/andyetitmoves/default.nix b/third_party/nixpkgs/pkgs/games/andyetitmoves/default.nix index f939f5b2ba..9eb1c7594a 100644 --- a/third_party/nixpkgs/pkgs/games/andyetitmoves/default.nix +++ b/third_party/nixpkgs/pkgs/games/andyetitmoves/default.nix @@ -1,17 +1,14 @@ { lib, stdenv, fetchurl, libvorbis, libogg, libtheora, SDL, libXft, SDL_image, zlib, libX11, libpng, openal, runtimeShell, requireFile, commercialVersion ? false }: -let plainName = "andyetitmoves"; - version = "1.2.2"; -in - -stdenv.mkDerivation { - name = "${plainName}-${version}"; +stdenv.mkDerivation rec { + pname = "andyetitmoves"; + version = "1.2.2"; src = if stdenv.hostPlatform.system == "i686-linux" || stdenv.hostPlatform.system == "x86_64-linux" then let postfix = if stdenv.hostPlatform.system == "i686-linux" then "i386" else "x86_64"; - commercialName = "${plainName}-${version}_${postfix}.tar.gz"; - demoUrl = "http://www.andyetitmoves.net/demo/${plainName}Demo-${version}_${postfix}.tar.gz"; + commercialName = "${pname}-${version}_${postfix}.tar.gz"; + demoUrl = "http://www.andyetitmoves.net/demo/${pname}Demo-${version}_${postfix}.tar.gz"; in if commercialVersion then requireFile { diff --git a/third_party/nixpkgs/pkgs/games/arena/default.nix b/third_party/nixpkgs/pkgs/games/arena/default.nix index 7320a405bb..16553a5f8e 100644 --- a/third_party/nixpkgs/pkgs/games/arena/default.nix +++ b/third_party/nixpkgs/pkgs/games/arena/default.nix @@ -12,10 +12,11 @@ let in stdenv.mkDerivation rec { - name = "arena-3.10-beta"; + pname = "arena"; + version = "3.10-beta"; src = fetchurl { - url = "http://www.playwitharena.de/downloads/arenalinux_64bit_3.10beta.tar.gz"; + url = "http://www.playwitharena.de/downloads/arenalinux_64bit_${lib.replaceStrings ["-"] [""] version}.tar.gz"; sha256 = "1pzb9sg4lzbbi4gbldvlb85p8xyl9xnplxwyb9pkk2mwzvvxkf0d"; }; @@ -25,19 +26,19 @@ stdenv.mkDerivation rec { unpackPhase = '' # This is is a tar bomb, i.e. it extract a dozen files and directories to # the top-level, so we must create a sub-directory first. - mkdir -p $out/lib/${name} - tar -C $out/lib/${name} -xf ${src} + mkdir -p $out/lib/${pname}-${version} + tar -C $out/lib/${pname}-${version} -xf ${src} # Remove executable bits from data files. This matters for the find command # we'll use below to find all bundled engines. - chmod -x $out/lib/${name}/Engines/*/*.{txt,bin,bmp,zip} + chmod -x $out/lib/${pname}-${version}/Engines/*/*.{txt,bin,bmp,zip} ''; buildPhase = '' # Arena has (at least) two executables plus a couple of bundled chess # engines that we need to patch. exes=( $(find $out -name '*x86_64_linux') - $(find $out/lib/${name}/Engines -type f -perm /u+x) + $(find $out/lib/${pname}-${version}/Engines -type f -perm /u+x) ) for i in "''${exes[@]}"; do # Arminius is statically linked. @@ -52,7 +53,7 @@ stdenv.mkDerivation rec { installPhase = '' mkdir -p $out/bin - ln -s $out/lib/${name}/Arena_x86_64_linux $out/bin/arena + ln -s $out/lib/${pname}-${version}/Arena_x86_64_linux $out/bin/arena ''; dontStrip = true; diff --git a/third_party/nixpkgs/pkgs/games/asc/default.nix b/third_party/nixpkgs/pkgs/games/asc/default.nix index 778f5224d2..af3f9f4031 100644 --- a/third_party/nixpkgs/pkgs/games/asc/default.nix +++ b/third_party/nixpkgs/pkgs/games/asc/default.nix @@ -3,10 +3,11 @@ , libpng, libtiff, fluidsynth, libmikmod, libvorbis, flac, libogg }: stdenv.mkDerivation rec { - name = "asc-2.6.0.0"; + pname = "asc"; + version = "2.6.0.0"; src = fetchurl { - url = "mirror://sourceforge/asc-hq/${name}.tar.bz2"; + url = "mirror://sourceforge/asc-hq/asc-${version}.tar.bz2"; sha256 = "1fybasb6srqfg6pqbvh0s0vvzjq9r0n6aq0z44hs7n68kmaam775"; }; diff --git a/third_party/nixpkgs/pkgs/games/ball-and-paddle/default.nix b/third_party/nixpkgs/pkgs/games/ball-and-paddle/default.nix index 7fe74dc47d..a935f3d468 100644 --- a/third_party/nixpkgs/pkgs/games/ball-and-paddle/default.nix +++ b/third_party/nixpkgs/pkgs/games/ball-and-paddle/default.nix @@ -1,10 +1,11 @@ { fetchurl, lib, stdenv, SDL, SDL_image, SDL_mixer, SDL_ttf, guile, gettext }: stdenv.mkDerivation rec { - name = "ballandpaddle-0.8.1"; + pname = "ballandpaddle"; + version = "0.8.1"; src = fetchurl { - url = "mirror://gnu/ballandpaddle/${name}.tar.gz"; + url = "mirror://gnu/ballandpaddle/ballandpaddle-${version}.tar.gz"; sha256 = "0zgpydad0mj7fbkippw3n9hlda6nac084dq5xfbsks9jn1xd30ny"; }; diff --git a/third_party/nixpkgs/pkgs/games/beret/default.nix b/third_party/nixpkgs/pkgs/games/beret/default.nix index e59fc7eb27..5d1bf0dd47 100644 --- a/third_party/nixpkgs/pkgs/games/beret/default.nix +++ b/third_party/nixpkgs/pkgs/games/beret/default.nix @@ -1,7 +1,8 @@ { lib, stdenv, fetchurl, SDL, SDL_image, SDL_ttf, SDL_mixer }: stdenv.mkDerivation { - name = "beret-1.2.0"; + pname = "beret"; + version = "1.2.0"; buildInputs = [ SDL SDL_image SDL_ttf SDL_mixer ]; diff --git a/third_party/nixpkgs/pkgs/games/bitsnbots/default.nix b/third_party/nixpkgs/pkgs/games/bitsnbots/default.nix index a3bd399a5f..e5e718e3ca 100644 --- a/third_party/nixpkgs/pkgs/games/bitsnbots/default.nix +++ b/third_party/nixpkgs/pkgs/games/bitsnbots/default.nix @@ -1,7 +1,8 @@ { lib, stdenv, fetchurl, SDL, lua, libGLU, libGL }: stdenv.mkDerivation rec { - name = "bitsnbots-20111230"; + pname = "bitsnbots"; + version = "20111230"; src = fetchurl { url = "http://moikmellah.org/downloads/bitsnbots/bitsnbots.source.tgz"; @@ -19,10 +20,10 @@ stdenv.mkDerivation rec { NIX_LDFLAGS = "-lGL"; installPhase = '' - mkdir -p $out/share/${name} - cp -R bitsnbots resource scripts README $out/share/${name} + mkdir -p $out/share/${pname}-${version} + cp -R bitsnbots resource scripts README $out/share/${pname}-${version} mkdir -p $out/bin - ln -s $out/share/${name}/bitsnbots $out/bin + ln -s $out/share/${pname}-${version}/bitsnbots $out/bin ''; buildInputs = [ SDL lua libGLU libGL ]; diff --git a/third_party/nixpkgs/pkgs/games/blackshades/default.nix b/third_party/nixpkgs/pkgs/games/blackshades/default.nix index 7fe4a6087f..263d92dcea 100644 --- a/third_party/nixpkgs/pkgs/games/blackshades/default.nix +++ b/third_party/nixpkgs/pkgs/games/blackshades/default.nix @@ -1,34 +1,37 @@ -{lib, stdenv, fetchsvn, SDL, libGLU, libGL, openal, libvorbis, freealut, SDL_image}: +{ lib, stdenv, fetchFromSourcehut +, SDL, SDL_image, libGLU, libGL, openal, libvorbis, freealut }: -stdenv.mkDerivation { - name = "blackshades-svn-110"; - src = fetchsvn { - url = "svn://svn.icculus.org/blackshades/trunk"; - rev = "110"; - sha256 = "0kbrh1dympk8scjxr6av24qs2bffz44l8qmw2m5gyqf4g3rxf6ra"; +stdenv.mkDerivation rec { + pname = "blackshades"; + version = "1.1.1"; + + src = fetchFromSourcehut { + owner = "~cnx"; + repo = pname; + rev = version; + sha256 = "1gx43hcqahbd21ib8blhzmsrwqfzx4qy7f10ck0mh2zc4bfihz64"; }; - NIX_LDFLAGS = "-lSDL_image"; - buildInputs = [ SDL SDL_image libGLU libGL openal libvorbis freealut ]; patchPhase = '' - sed -i -e s,Data/,$out/opt/$name/Data/,g \ - -e s,Data:,$out/opt/$name/Data/,g \ - Source/*.cpp + sed -i -e s,Data/,$out/share/$pname/,g \ + -e s,Data:,$out/share/$pname/,g \ + src/*.cpp ''; installPhase = '' - mkdir -p $out/bin $out/opt/$name - cp objs/blackshades $out/bin - cp -R Data IF* Readme $out/opt/$name/ + mkdir -p $out/bin $out/share/doc/$pname + cp build/blackshades $out/bin + cp -R Data $out/share/$pname + cp README.md $out/share/doc/$pname ''; meta = { - homepage = "http://icculus.org/blackshades/"; - description = "Protect the VIP"; - license = lib.licenses.free; - maintainers = with lib.maintainers; [viric]; + homepage = "https://sr.ht/~cnx/blackshades"; + description = "A psychic bodyguard FPS"; + license = lib.licenses.gpl3Plus; + maintainers = with lib.maintainers; [ McSinyx viric ]; platforms = with lib.platforms; linux; }; } diff --git a/third_party/nixpkgs/pkgs/games/bsdgames/default.nix b/third_party/nixpkgs/pkgs/games/bsdgames/default.nix index 04a86c0b83..837fb4e176 100644 --- a/third_party/nixpkgs/pkgs/games/bsdgames/default.nix +++ b/third_party/nixpkgs/pkgs/games/bsdgames/default.nix @@ -1,10 +1,11 @@ { lib, stdenv, fetchurl, ncurses, openssl, flex, bison, less, miscfiles }: -stdenv.mkDerivation { - name = "bsd-games-2.17"; +stdenv.mkDerivation rec { + pname = "bsd-games"; + version = "2.17"; src = fetchurl { - url = "ftp://metalab.unc.edu/pub/Linux/games/bsd-games-2.17.tar.gz"; + url = "ftp://metalab.unc.edu/pub/Linux/games/bsd-games-${version}.tar.gz"; sha256 = "0q7zdyyfvn15y0w4g54kq3gza89h61py727m8slmw73cxx594vq6"; }; diff --git a/third_party/nixpkgs/pkgs/games/chessdb/default.nix b/third_party/nixpkgs/pkgs/games/chessdb/default.nix index 40f90e75ff..6de8726722 100644 --- a/third_party/nixpkgs/pkgs/games/chessdb/default.nix +++ b/third_party/nixpkgs/pkgs/games/chessdb/default.nix @@ -1,10 +1,11 @@ { lib, stdenv, fetchurl, tcl, tk, libX11, makeWrapper }: -stdenv.mkDerivation { - name = "chessdb-3.6.19-beta-1"; +stdenv.mkDerivation rec { + pname = "chessdb"; + version = "3.6.19-beta-1"; src = fetchurl { - url = "mirror://sourceforge/chessdb/ChessDB-3.6.19-beta-1.tar.gz"; + url = "mirror://sourceforge/chessdb/ChessDB-${version}.tar.gz"; sha256 = "0brc3wln3bxp979iqj2w1zxpfd0pch8zzazhdmwf7acww4hrsz62"; }; diff --git a/third_party/nixpkgs/pkgs/games/clonehero/default.nix b/third_party/nixpkgs/pkgs/games/clonehero/default.nix index 377e1d79bd..cf1fad8d94 100644 --- a/third_party/nixpkgs/pkgs/games/clonehero/default.nix +++ b/third_party/nixpkgs/pkgs/games/clonehero/default.nix @@ -2,7 +2,7 @@ , stdenv , fetchurl , autoPatchelfHook -, alsaLib +, alsa-lib , gtk2 , libXrandr , libXScrnSaver @@ -33,7 +33,7 @@ stdenv.mkDerivation rec { zlib # Run-time libraries (loaded with dlopen) - alsaLib # ALSA sound + alsa-lib # ALSA sound libXrandr # X11 resolution detection libXScrnSaver # X11 screensaver prevention udev # udev input drivers diff --git a/third_party/nixpkgs/pkgs/games/crack-attack/default.nix b/third_party/nixpkgs/pkgs/games/crack-attack/default.nix index f5296e8ce6..fb13ce8c16 100644 --- a/third_party/nixpkgs/pkgs/games/crack-attack/default.nix +++ b/third_party/nixpkgs/pkgs/games/crack-attack/default.nix @@ -1,10 +1,11 @@ { lib, stdenv, fetchurl, pkg-config, gtk2, freeglut, SDL, SDL_mixer, libGLU, libGL, libXi, libXmu }: -stdenv.mkDerivation { - name = "crack-attack-1.1.14"; +stdenv.mkDerivation rec { + pname = "crack-attack"; + version = "1.1.14"; src = fetchurl { - url = "mirror://savannah/crack-attack/crack-attack-1.1.14.tar.gz"; + url = "mirror://savannah/crack-attack/crack-attack-${version}.tar.gz"; sha256 = "1sakj9a2q05brpd7lkqxi8q30bccycdzd96ns00s6jbxrzjlijkm"; }; diff --git a/third_party/nixpkgs/pkgs/games/duckmarines/default.nix b/third_party/nixpkgs/pkgs/games/duckmarines/default.nix index 013ebcc7ec..ca2a743914 100644 --- a/third_party/nixpkgs/pkgs/games/duckmarines/default.nix +++ b/third_party/nixpkgs/pkgs/games/duckmarines/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, love, lua, makeWrapper, makeDesktopItem }: -let +stdenv.mkDerivation rec { pname = "duckmarines"; version = "1.0c"; @@ -19,11 +19,6 @@ let categories = "Game;"; }; -in - -stdenv.mkDerivation rec { - name = "${pname}-${version}"; - src = fetchurl { url = "https://github.com/SimonLarsen/${pname}/releases/download/v${version}/${pname}-1.0c.love"; sha256 = "1rvgpkvi4h9zhc4fwb4knhsa789yjcx4a14fi4vqfdyybhvg5sh9"; diff --git a/third_party/nixpkgs/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix b/third_party/nixpkgs/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix index bd8825582c..243db1e1c3 100644 --- a/third_party/nixpkgs/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix +++ b/third_party/nixpkgs/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "dwarf-therapist"; - version = "41.1.5"; + version = "41.2.2"; src = fetchFromGitHub { owner = "Dwarf-Therapist"; repo = "Dwarf-Therapist"; rev = "v${version}"; - sha256 = "0w1mwwf49vdmvmdfvlkn4m0hzvlj111rpl8hv4rw6v8nv6yfb2y4"; + sha256 = "sha256-zsEG68ioSw64UfmqlTLO1i5sObg8C4zxvdPxdQGMhhU="; }; nativeBuildInputs = [ texlive cmake ninja ]; diff --git a/third_party/nixpkgs/pkgs/games/eboard/default.nix b/third_party/nixpkgs/pkgs/games/eboard/default.nix index 67d7d38018..293811e9b0 100644 --- a/third_party/nixpkgs/pkgs/games/eboard/default.nix +++ b/third_party/nixpkgs/pkgs/games/eboard/default.nix @@ -1,10 +1,11 @@ { lib, stdenv, fetchurl, perl, pkg-config, gtk2 }: -stdenv.mkDerivation { - name = "eboard-1.1.1"; +stdenv.mkDerivation rec { + pname = "eboard"; + version = "1.1.1"; src = fetchurl { - url = "mirror://sourceforge/eboard/eboard-1.1.1.tar.bz2"; + url = "mirror://sourceforge/eboard/eboard-${version}.tar.bz2"; sha256 = "0vm25j1s2zg1lipwjv9qrcm877ikfmk1yh34i8f5l3bwd63115xd"; }; diff --git a/third_party/nixpkgs/pkgs/games/eduke32/default.nix b/third_party/nixpkgs/pkgs/games/eduke32/default.nix index a5796f697e..e15cf241f7 100644 --- a/third_party/nixpkgs/pkgs/games/eduke32/default.nix +++ b/third_party/nixpkgs/pkgs/games/eduke32/default.nix @@ -1,12 +1,8 @@ { lib, stdenv, fetchurl, makeWrapper, pkg-config, nasm, makeDesktopItem -, alsaLib, flac, gtk2, libvorbis, libvpx, libGLU, libGL +, alsa-lib, flac, gtk2, libvorbis, libvpx, libGLU, libGL , SDL2, SDL2_mixer }: let - version = "20200907"; - rev = "9257"; - revExtra = "93f62bbad"; - desktopItem = makeDesktopItem { name = "eduke32"; exec = "@out@/bin/${wrapper}"; @@ -18,16 +14,18 @@ let wrapper = "eduke32-wrapper"; -in stdenv.mkDerivation { +in stdenv.mkDerivation rec { pname = "eduke32"; - inherit version; + version = "20200907"; + rev = "9257"; + revExtra = "93f62bbad"; src = fetchurl { url = "http://dukeworld.duke4.net/eduke32/synthesis/latest/eduke32_src_${version}-${rev}-${revExtra}.tar.xz"; sha256 = "972630059be61ef9564a241b84ef2ee4f69fc85c19ee36ce46052ff2f1ce3bf9"; }; - buildInputs = [ alsaLib flac gtk2 libvorbis libvpx libGL libGLU SDL2 SDL2_mixer ]; + buildInputs = [ alsa-lib flac gtk2 libvorbis libvpx libGL libGLU SDL2 SDL2_mixer ]; nativeBuildInputs = [ makeWrapper pkg-config ] ++ lib.optional (stdenv.hostPlatform.system == "i686-linux") nasm; diff --git a/third_party/nixpkgs/pkgs/games/endless-sky/default.nix b/third_party/nixpkgs/pkgs/games/endless-sky/default.nix index 010f90a049..0c9871037f 100644 --- a/third_party/nixpkgs/pkgs/games/endless-sky/default.nix +++ b/third_party/nixpkgs/pkgs/games/endless-sky/default.nix @@ -2,13 +2,9 @@ , SDL2, libpng, libjpeg, glew, openal, scons, libmad }: -let - version = "0.9.12"; - -in -stdenv.mkDerivation { +stdenv.mkDerivation rec { pname = "endless-sky"; - inherit version; + version = "0.9.12"; src = fetchFromGitHub { owner = "endless-sky"; diff --git a/third_party/nixpkgs/pkgs/games/exult/default.nix b/third_party/nixpkgs/pkgs/games/exult/default.nix index 40d7300e9c..fe401a627b 100644 --- a/third_party/nixpkgs/pkgs/games/exult/default.nix +++ b/third_party/nixpkgs/pkgs/games/exult/default.nix @@ -12,10 +12,11 @@ let in stdenv.mkDerivation rec { - name = "exult-1.6"; + pname = "exult"; + version = "1.6"; src = fetchurl { - url = "mirror://sourceforge/exult/${name}.tar.gz"; + url = "mirror://sourceforge/exult/exult-${version}.tar.gz"; sha256 = "1dm27qkxj30567zb70q4acddsizn0xyi3z87hg7lysxdkyv49s3s"; }; diff --git a/third_party/nixpkgs/pkgs/games/factorio/default.nix b/third_party/nixpkgs/pkgs/games/factorio/default.nix index 879bbfa231..9798d65932 100644 --- a/third_party/nixpkgs/pkgs/games/factorio/default.nix +++ b/third_party/nixpkgs/pkgs/games/factorio/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, makeWrapper, makeDesktopItem -, alsaLib, libpulseaudio, libX11, libXcursor, libXinerama, libXrandr, libXi, libGL +, alsa-lib, libpulseaudio, libX11, libXcursor, libXinerama, libXrandr, libXi, libGL , libSM, libICE, libXext, factorio-utils , releaseType , mods ? [] @@ -182,7 +182,7 @@ let buildInputs = [ libpulseaudio ]; libPath = lib.makeLibraryPath [ - alsaLib + alsa-lib libpulseaudio libX11 libXcursor diff --git a/third_party/nixpkgs/pkgs/games/factorio/update.py b/third_party/nixpkgs/pkgs/games/factorio/update.py index b1cdce6b4a..3806ba3614 100755 --- a/third_party/nixpkgs/pkgs/games/factorio/update.py +++ b/third_party/nixpkgs/pkgs/games/factorio/update.py @@ -80,6 +80,12 @@ def fetch_versions() -> FactorioVersionsJSON: def generate_our_versions(factorio_versions: FactorioVersionsJSON) -> OurVersionJSON: rec_dd = lambda: defaultdict(rec_dd) output = rec_dd() + + # Deal with times where there's no experimental version + for rc in RELEASE_CHANNELS: + if not factorio_versions[rc.name]: + factorio_versions[rc.name] = factorio_versions['stable'] + for system in SYSTEMS: for release_type in RELEASE_TYPES: for release_channel in RELEASE_CHANNELS: diff --git a/third_party/nixpkgs/pkgs/games/factorio/versions.json b/third_party/nixpkgs/pkgs/games/factorio/versions.json index 29c2d6a7bb..b230d94cfa 100644 --- a/third_party/nixpkgs/pkgs/games/factorio/versions.json +++ b/third_party/nixpkgs/pkgs/games/factorio/versions.json @@ -2,56 +2,56 @@ "x86_64-linux": { "alpha": { "experimental": { - "name": "factorio_alpha_x64-1.1.34.tar.xz", + "name": "factorio_alpha_x64-1.1.35.tar.xz", "needsAuth": true, - "sha256": "1gba6ivxdhj8khk6kfja2nzvqbbjlq1gzk8vlb23mkzqcmf4gnqc", + "sha256": "1svjjpyffdrmll1b3icsrikfi4v2r1z6j7iqq0v36iq0zw7vw3bk", "tarDirectory": "x64", - "url": "https://factorio.com/get-download/1.1.34/alpha/linux64", - "version": "1.1.34" + "url": "https://factorio.com/get-download/1.1.35/alpha/linux64", + "version": "1.1.35" }, "stable": { - "name": "factorio_alpha_x64-1.1.34.tar.xz", + "name": "factorio_alpha_x64-1.1.35.tar.xz", "needsAuth": true, - "sha256": "1gba6ivxdhj8khk6kfja2nzvqbbjlq1gzk8vlb23mkzqcmf4gnqc", + "sha256": "1svjjpyffdrmll1b3icsrikfi4v2r1z6j7iqq0v36iq0zw7vw3bk", "tarDirectory": "x64", - "url": "https://factorio.com/get-download/1.1.34/alpha/linux64", - "version": "1.1.34" + "url": "https://factorio.com/get-download/1.1.35/alpha/linux64", + "version": "1.1.35" } }, "demo": { "experimental": { - "name": "factorio_demo_x64-1.1.30.tar.xz", + "name": "factorio_demo_x64-1.1.35.tar.xz", "needsAuth": false, - "sha256": "1b3na8xn9lhlvrsd6hxr130nf9p81s26n25a4qdgkczz6waysgjv", + "sha256": "0yqb4gf2avpxr4vwafws9pv74xyd9g84zggfikfc801ldc7sp29f", "tarDirectory": "x64", - "url": "https://factorio.com/get-download/1.1.30/demo/linux64", - "version": "1.1.30" + "url": "https://factorio.com/get-download/1.1.35/demo/linux64", + "version": "1.1.35" }, "stable": { - "name": "factorio_demo_x64-1.1.34.tar.xz", + "name": "factorio_demo_x64-1.1.35.tar.xz", "needsAuth": false, - "sha256": "1ld373lxfx1xbaqq394az8sxfxpjwkyqwwr77wbmg4sm2g9dinxm", + "sha256": "0yqb4gf2avpxr4vwafws9pv74xyd9g84zggfikfc801ldc7sp29f", "tarDirectory": "x64", - "url": "https://factorio.com/get-download/1.1.34/demo/linux64", - "version": "1.1.34" + "url": "https://factorio.com/get-download/1.1.35/demo/linux64", + "version": "1.1.35" } }, "headless": { "experimental": { - "name": "factorio_headless_x64-1.1.34.tar.xz", + "name": "factorio_headless_x64-1.1.35.tar.xz", "needsAuth": false, - "sha256": "0sfafdvfhhvxnhf7q23xnvckx8nihg5xzzc6dw39a3iprwhr75i1", + "sha256": "0xpiw89ad6cfpc576g5jpsyzwjncs3jrx01056p52wj01747fm94", "tarDirectory": "x64", - "url": "https://factorio.com/get-download/1.1.34/headless/linux64", - "version": "1.1.34" + "url": "https://factorio.com/get-download/1.1.35/headless/linux64", + "version": "1.1.35" }, "stable": { - "name": "factorio_headless_x64-1.1.34.tar.xz", + "name": "factorio_headless_x64-1.1.35.tar.xz", "needsAuth": false, - "sha256": "0sfafdvfhhvxnhf7q23xnvckx8nihg5xzzc6dw39a3iprwhr75i1", + "sha256": "0xpiw89ad6cfpc576g5jpsyzwjncs3jrx01056p52wj01747fm94", "tarDirectory": "x64", - "url": "https://factorio.com/get-download/1.1.34/headless/linux64", - "version": "1.1.34" + "url": "https://factorio.com/get-download/1.1.35/headless/linux64", + "version": "1.1.35" } } } diff --git a/third_party/nixpkgs/pkgs/games/fsg/default.nix b/third_party/nixpkgs/pkgs/games/fsg/default.nix index dd6d46ec6a..3869ad9884 100644 --- a/third_party/nixpkgs/pkgs/games/fsg/default.nix +++ b/third_party/nixpkgs/pkgs/games/fsg/default.nix @@ -1,12 +1,13 @@ { lib, stdenv, fetchurl, gtk2, glib, pkg-config, libGLU, libGL, wxGTK, libX11, xorgproto , runtimeShell }: -stdenv.mkDerivation { - name = "fsg-4.4"; +stdenv.mkDerivation rec { + pname = "fsg"; + version = "4.4"; src = fetchurl { - name = "fsg-src-4.4.tar.gz"; - url = "https://github.com/ctrlcctrlv/wxsand/blob/master/fsg-src-4.4-ORIGINAL.tar.gz?raw=true"; + name = "fsg-src-${version}.tar.gz"; + url = "https://github.com/ctrlcctrlv/wxsand/blob/master/fsg-src-${version}-ORIGINAL.tar.gz?raw=true"; sha256 = "1756y01rkvd3f1pkj88jqh83fqcfl2fy0c48mcq53pjzln9ycv8c"; }; diff --git a/third_party/nixpkgs/pkgs/games/gambatte/default.nix b/third_party/nixpkgs/pkgs/games/gambatte/default.nix index 4d6795070c..07aad4a5b6 100644 --- a/third_party/nixpkgs/pkgs/games/gambatte/default.nix +++ b/third_party/nixpkgs/pkgs/games/gambatte/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, scons, qt4, alsaLib }: +{ lib, stdenv, fetchFromGitHub, scons, qt4, alsa-lib }: stdenv.mkDerivation { pname = "gambatte"; @@ -11,7 +11,7 @@ stdenv.mkDerivation { sha256 = "0cc6zcvxpvi5hgcssb1zy0fkj9nk7n0d2xm88a4v05kpm5zw7sh2"; }; - buildInputs = [ scons qt4 alsaLib ]; + buildInputs = [ scons qt4 alsa-lib ]; patches = [ ./fix-scons-paths.patch ]; diff --git a/third_party/nixpkgs/pkgs/games/gav/default.nix b/third_party/nixpkgs/pkgs/games/gav/default.nix index b839045537..e94b73d763 100644 --- a/third_party/nixpkgs/pkgs/games/gav/default.nix +++ b/third_party/nixpkgs/pkgs/games/gav/default.nix @@ -1,10 +1,11 @@ {lib, stdenv, fetchurl, SDL, SDL_image, SDL_mixer, SDL_net} : -stdenv.mkDerivation { - name = "gav-0.9.0"; +stdenv.mkDerivation rec { + pname = "gav"; + version = "0.9.0"; src = fetchurl { - url = "mirror://sourceforge/gav/gav-0.9.0.tar.gz"; + url = "mirror://sourceforge/gav/gav-${version}.tar.gz"; sha256 = "8f0deb8b2cd775b339229054f4f282583a4cfbcba9d27a6213cf910bab944f3e"; }; diff --git a/third_party/nixpkgs/pkgs/games/gemrb/default.nix b/third_party/nixpkgs/pkgs/games/gemrb/default.nix index 9c5744f729..77c9c7adaf 100644 --- a/third_party/nixpkgs/pkgs/games/gemrb/default.nix +++ b/third_party/nixpkgs/pkgs/games/gemrb/default.nix @@ -1,32 +1,71 @@ -{ lib, stdenv, fetchFromGitHub, cmake -, freetype, SDL2, SDL2_mixer, openal, zlib, libpng, python2, libvorbis -, libiconv }: +{ lib +, stdenv +, fetchFromGitHub +, cmake +, SDL2 +, SDL2_mixer +, freetype +, libGL +, libiconv +, libpng +, libvlc +, libvorbis +, openal +, python2 # 0.9.0 crashes after character generation with py3, so stick to py2 for now +, zlib +}: +let + # the GLES backend on rpi is untested as I don't have the hardware + backend = + if (stdenv.isx86_32 || stdenv.isx86_64) then "OpenGL" else "GLES"; + +in stdenv.mkDerivation rec { pname = "gemrb"; - version = "0.8.7"; + version = "0.9.0"; src = fetchFromGitHub { owner = "gemrb"; repo = "gemrb"; rev = "v${version}"; - sha256 = "14j9mhrbi4gnrbv25nlsvcxzkylijzrnwbqqnrg7pr452lb3srpb"; + sha256 = "sha256-h/dNPY0QZ2m7aYgRla3r1E8APJqO99ePa2ABhhh3Aoc="; }; - # TODO: make libpng, libvorbis, sdl_mixer, freetype, vlc, glew (and other gl - # reqs) optional - buildInputs = [ freetype python2 openal SDL2 SDL2_mixer zlib libpng libvorbis libiconv ]; + buildInputs = [ + SDL2 + SDL2_mixer + freetype + libGL + libiconv + libpng + libvlc + libvorbis + openal + python2 + zlib + ]; nativeBuildInputs = [ cmake ]; - # TODO: add proper OpenGL support. We are currently (0.8.7) getting a shader - # error on execution when enabled. + LIBVLC_INCLUDE_PATH = "${lib.getDev libvlc}/include"; + LIBVLC_LIBRARY_PATH = "${lib.getLib libvlc}/lib"; + cmakeFlags = [ + # use the Mesa drivers for video on ARM (harmless on x86) + "-DDISABLE_VIDEOCORE=ON" "-DLAYOUT=opt" - # "-DOPENGL_BACKEND=GLES" - # "-DOpenGL_GL_PREFERENCE=GLVND" + "-DOPENGL_BACKEND=${backend}" + "-DOpenGL_GL_PREFERENCE=GLVND" ]; + postInstall = '' + for s in 36 48 72 96 144; do + install -Dm444 ../artwork/gemrb-logo-glow-''${s}px.png $out/share/icons/hicolor/''${s}x''${s}/gemrb.png + done + install -Dm444 ../artwork/gemrb-logo.png $out/share/icons/gemrb.png + ''; + meta = with lib; { description = "A reimplementation of the Infinity Engine, used by games such as Baldur's Gate"; longDescription = '' @@ -36,8 +75,7 @@ stdenv.mkDerivation rec { ruleset (Baldur's Gate and Icewind Dale series, Planescape: Torment). ''; homepage = "https://gemrb.org/"; - license = licenses.gpl2; + license = licenses.gpl2Only; maintainers = with maintainers; [ peterhoeg ]; - platforms = platforms.all; }; } diff --git a/third_party/nixpkgs/pkgs/games/gltron/default.nix b/third_party/nixpkgs/pkgs/games/gltron/default.nix index 45267579c9..540170c49b 100644 --- a/third_party/nixpkgs/pkgs/games/gltron/default.nix +++ b/third_party/nixpkgs/pkgs/games/gltron/default.nix @@ -1,9 +1,10 @@ {lib, stdenv, fetchurl, SDL, libGLU, libGL, zlib, libpng, libvorbis, libmikmod, SDL_sound } : stdenv.mkDerivation rec { - name = "gltron-0.70"; + pname = "gltron"; + version = "0.70"; src = fetchurl { - url = "mirror://sourceforge/gltron/${name}-source.tar.gz"; + url = "mirror://sourceforge/gltron/gltron-${version}-source.tar.gz"; sha256 = "e0c8ebb41a18a1f8d7302a9c2cb466f5b1dd63e9a9966c769075e6b6bdad8bb0"; }; diff --git a/third_party/nixpkgs/pkgs/games/gmad/default.nix b/third_party/nixpkgs/pkgs/games/gmad/default.nix index eb893882ff..8f43c75f06 100644 --- a/third_party/nixpkgs/pkgs/games/gmad/default.nix +++ b/third_party/nixpkgs/pkgs/games/gmad/default.nix @@ -1,7 +1,8 @@ { lib, stdenv, fetchFromGitHub, premake4, bootil }: stdenv.mkDerivation rec { - name = "gmad-unstable-2015-04-16"; + pname = "gmad"; + version = "unstable-2015-04-16"; meta = { description = "Garry's Mod Addon Creator and Extractor"; diff --git a/third_party/nixpkgs/pkgs/games/grapejuice/default.nix b/third_party/nixpkgs/pkgs/games/grapejuice/default.nix new file mode 100644 index 0000000000..1cb27f7b8c --- /dev/null +++ b/third_party/nixpkgs/pkgs/games/grapejuice/default.nix @@ -0,0 +1,95 @@ +{ lib +, fetchFromGitLab +, gobject-introspection +, python3Packages +, gtk3 +, wrapGAppsHook +, glib +, cairo +, desktop-file-utils +, xdg-utils +, xdg-user-dirs +, wine +, winetricks +}: + +python3Packages.buildPythonApplication rec { + pname = "grapejuice"; + version = "3.12.5"; + + src = fetchFromGitLab { + owner = "BrinkerVII"; + repo = "grapejuice"; + rev = "v${version}"; + sha256 = "1xgxyfwwghy9l17i6y40axdrpp4fgxgdr5y97flwmfivif01ifs1"; + }; + + nativeBuildInputs = [ + gobject-introspection + desktop-file-utils + glib + gtk3 + wrapGAppsHook + ]; + + buildInputs = [ + cairo + ]; + + propagatedBuildInputs = with python3Packages; [ + requests + pygobject3 + dbus-python + packaging + psutil + setuptools + ]; + + dontWrapGApps = true; + + makeWrapperArgs = [ + "\${gappsWrapperArgs[@]}" + "--prefix PATH : ${lib.makeBinPath [ xdg-user-dirs xdg-utils wine (winetricks.override { wine = wine; }) ]}" + ]; + + postPatch = '' + substituteInPlace requirements.txt \ + --replace "PyGObject-stubs" "" + + substituteInPlace src/grapejuice_common/assets/desktop/grapejuice.desktop \ + --replace \$GRAPEJUICE_EXECUTABLE "$out/bin/grapejuice" \ + --replace \$GRAPEJUICE_ICON grapejuice + + substituteInPlace src/grapejuice_common/assets/desktop/roblox-player.desktop \ + --replace \$GRAPEJUICE_EXECUTABLE "$out/bin/grapejuice" \ + --replace \$PLAYER_ICON "grapejuice-roblox-player" + + substituteInPlace src/grapejuice_common/assets/desktop/roblox-app.desktop \ + --replace \$GRAPEJUICE_EXECUTABLE "$out/bin/grapejuice" \ + --replace \$PLAYER_ICON "grapejuice-roblox-player" + + substituteInPlace src/grapejuice_common/assets/desktop/roblox-studio.desktop \ + --replace \$GRAPEJUICE_EXECUTABLE "$out/bin/grapejuice" \ + --replace \$STUDIO_ICON "grapejuice-roblox-studio" + ''; + + postInstall = '' + mkdir -p "$out/share/icons" "$out/share/applications" "$out/share/mime/packages" + cp -r src/grapejuice_common/assets/desktop/* $out/share/applications/ + cp -r src/grapejuice_common/assets/icons $out/share/ + cp src/grapejuice_common/assets/mime_xml/*.xml $out/share/mime/packages/ + ''; + + # No tests + doCheck = false; + + pythonImportsCheck = [ "grapejuice" ]; + + meta = with lib; { + homepage = "https://gitlab.com/brinkervii/grapejuice"; + description = "Simple Wine+Roblox management tool"; + license = licenses.gpl3Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ artturin ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/games/gtetrinet/default.nix b/third_party/nixpkgs/pkgs/games/gtetrinet/default.nix index 32ee954408..d34b3775bd 100644 --- a/third_party/nixpkgs/pkgs/games/gtetrinet/default.nix +++ b/third_party/nixpkgs/pkgs/games/gtetrinet/default.nix @@ -1,7 +1,8 @@ { fetchFromGitHub, lib, stdenv, autoreconfHook, intltool, pkg-config, libgnome, libgnomeui, GConf }: stdenv.mkDerivation { - name = "gtetrinet-0.7.11"; + pname = "gtetrinet"; + version = "0.7.11"; src = fetchFromGitHub { owner = "GNOME"; diff --git a/third_party/nixpkgs/pkgs/games/icbm3d/default.nix b/third_party/nixpkgs/pkgs/games/icbm3d/default.nix index 7edf7cd477..a166b4f83f 100644 --- a/third_party/nixpkgs/pkgs/games/icbm3d/default.nix +++ b/third_party/nixpkgs/pkgs/games/icbm3d/default.nix @@ -1,9 +1,10 @@ {lib, stdenv, fetchurl, libX11}: -stdenv.mkDerivation { - name = "icbm3d-0.4"; +stdenv.mkDerivation rec { + pname = "icbm3d"; + version = "0.4"; src = fetchurl { - url = "ftp://ftp.tuxpaint.org/unix/x/icbm3d/icbm3d.0.4.tar.gz"; + url = "ftp://ftp.tuxpaint.org/unix/x/icbm3d/icbm3d.${version}.tar.gz"; sha256 = "1z9q01mj0v9qbwby5cajjc9wpvdw2ma5v1r639vraxpl9qairm4s"; }; diff --git a/third_party/nixpkgs/pkgs/games/ivan/default.nix b/third_party/nixpkgs/pkgs/games/ivan/default.nix index 3ec196b737..f16aa75263 100644 --- a/third_party/nixpkgs/pkgs/games/ivan/default.nix +++ b/third_party/nixpkgs/pkgs/games/ivan/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, cmake, pkg-config, SDL2, SDL2_mixer, alsaLib, libpng +{ lib, stdenv, fetchFromGitHub, cmake, pkg-config, SDL2, SDL2_mixer, alsa-lib, libpng , pcre, makeDesktopItem }: stdenv.mkDerivation rec { @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; - buildInputs = [ SDL2 SDL2_mixer alsaLib libpng pcre ]; + buildInputs = [ SDL2 SDL2_mixer alsa-lib libpng pcre ]; hardeningDisable = ["all"]; diff --git a/third_party/nixpkgs/pkgs/games/kobodeluxe/default.nix b/third_party/nixpkgs/pkgs/games/kobodeluxe/default.nix index cd5dc3cc2b..9dea908242 100644 --- a/third_party/nixpkgs/pkgs/games/kobodeluxe/default.nix +++ b/third_party/nixpkgs/pkgs/games/kobodeluxe/default.nix @@ -1,9 +1,10 @@ {lib, stdenv, fetchurl, SDL, SDL_image, libGLU, libGL} : -stdenv.mkDerivation { - name = "kobodeluxe-0.5.1"; +stdenv.mkDerivation rec { + pname = "kobodeluxe"; + version = "0.5.1"; src = fetchurl { - url = "http://olofson.net/kobodl/download/KoboDeluxe-0.5.1.tar.bz2"; + url = "http://olofson.net/kobodl/download/KoboDeluxe-${version}.tar.bz2"; sha256 = "0f7b910a399d985437564af8c5d81d6dcf22b96b26b01488d72baa6a6fdb5c2c"; }; diff --git a/third_party/nixpkgs/pkgs/games/macopix/default.nix b/third_party/nixpkgs/pkgs/games/macopix/default.nix index bb91891a68..8f226f3cef 100644 --- a/third_party/nixpkgs/pkgs/games/macopix/default.nix +++ b/third_party/nixpkgs/pkgs/games/macopix/default.nix @@ -1,10 +1,11 @@ { lib, stdenv, fetchurl, pkg-config, gtk, openssl }: stdenv.mkDerivation rec { - name = "macopix-1.7.4"; + pname = "macopix"; + version = "1.7.4"; src = fetchurl { - url = "http://rosegray.sakura.ne.jp/macopix/${name}.tar.bz2"; + url = "http://rosegray.sakura.ne.jp/macopix/macopix-${version}.tar.bz2"; sha256 = "0sgnr0wrw3hglcnsyvipll7icfv69ssmyw584zfhk1rgramlkzyb"; }; diff --git a/third_party/nixpkgs/pkgs/games/methane/default.nix b/third_party/nixpkgs/pkgs/games/methane/default.nix index 17c9dc4256..071e1a64b5 100644 --- a/third_party/nixpkgs/pkgs/games/methane/default.nix +++ b/third_party/nixpkgs/pkgs/games/methane/default.nix @@ -16,7 +16,7 @@ , clanlib , libXrender , libmikmod -, alsaLib +, alsa-lib }: stdenv.mkDerivation rec { @@ -48,7 +48,7 @@ stdenv.mkDerivation rec { clanlib libXrender libmikmod - alsaLib + alsa-lib ]; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/games/mindustry/default.nix b/third_party/nixpkgs/pkgs/games/mindustry/default.nix index 7e1a0cba17..7320792383 100644 --- a/third_party/nixpkgs/pkgs/games/mindustry/default.nix +++ b/third_party/nixpkgs/pkgs/games/mindustry/default.nix @@ -12,7 +12,7 @@ , pkg-config , stb , ant -, alsaLib +, alsa-lib , glew # Make the build version easily overridable. @@ -132,7 +132,7 @@ stdenv.mkDerivation rec { buildInputs = lib.optionals enableClient [ SDL2 glew - alsaLib + alsa-lib ]; nativeBuildInputs = [ pkg-config diff --git a/third_party/nixpkgs/pkgs/games/minecraft-server/default.nix b/third_party/nixpkgs/pkgs/games/minecraft-server/default.nix index 7d70ee9e6d..ee47a0ecdc 100644 --- a/third_party/nixpkgs/pkgs/games/minecraft-server/default.nix +++ b/third_party/nixpkgs/pkgs/games/minecraft-server/default.nix @@ -1,12 +1,12 @@ { lib, stdenv, fetchurl, nixosTests, jre_headless }: stdenv.mkDerivation { pname = "minecraft-server"; - version = "1.16.5"; + version = "1.17"; src = fetchurl { - url = "https://launcher.mojang.com/v1/objects/1b557e7b033b583cd9f66746b7a9ab1ec1673ced/server.jar"; + url = "https://launcher.mojang.com/v1/objects/0a269b5f2c5b93b1712d0f5dc43b6182b9ab254e/server.jar"; # sha1 because that comes from mojang via api - sha1 = "1b557e7b033b583cd9f66746b7a9ab1ec1673ced"; + sha1 = "0a269b5f2c5b93b1712d0f5dc43b6182b9ab254e"; }; preferLocalBuild = true; diff --git a/third_party/nixpkgs/pkgs/games/minecraft/default.nix b/third_party/nixpkgs/pkgs/games/minecraft/default.nix index 3d0b53035e..254c01fdf1 100644 --- a/third_party/nixpkgs/pkgs/games/minecraft/default.nix +++ b/third_party/nixpkgs/pkgs/games/minecraft/default.nix @@ -15,7 +15,7 @@ , pango , cairo , expat -, alsaLib +, alsa-lib , cups , dbus , atk @@ -45,13 +45,13 @@ let curl libpulseaudio systemd - alsaLib # needed for narrator + alsa-lib # needed for narrator flite # needed for narrator libXxf86vm # needed only for versions <1.13 ]; libPath = lib.makeLibraryPath ([ - alsaLib + alsa-lib atk cairo cups diff --git a/third_party/nixpkgs/pkgs/games/multimc/0001-pick-latest-java-first.patch b/third_party/nixpkgs/pkgs/games/multimc/0001-pick-latest-java-first.patch new file mode 100644 index 0000000000..31ab0497f8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/games/multimc/0001-pick-latest-java-first.patch @@ -0,0 +1,48 @@ +From 44e1b2a19a869b907b40e56c85c8a47aa6c22097 Mon Sep 17 00:00:00 2001 +From: =?UTF-8?q?Mustafa=20=C3=87al=C4=B1=C5=9Fkan?= +Date: Tue, 22 Jun 2021 21:50:11 +0300 +Subject: [PATCH] pick latest java first + +--- + api/logic/java/JavaInstallList.cpp | 4 ++-- + api/logic/java/JavaUtils.cpp | 2 +- + 2 files changed, 3 insertions(+), 3 deletions(-) + +diff --git a/api/logic/java/JavaInstallList.cpp b/api/logic/java/JavaInstallList.cpp +index 0bded03c..40898e20 100644 +--- a/api/logic/java/JavaInstallList.cpp ++++ b/api/logic/java/JavaInstallList.cpp +@@ -120,8 +120,8 @@ void JavaInstallList::updateListData(QList versions) + + bool sortJavas(BaseVersionPtr left, BaseVersionPtr right) + { +- auto rleft = std::dynamic_pointer_cast(left); +- auto rright = std::dynamic_pointer_cast(right); ++ auto rleft = std::dynamic_pointer_cast(right); ++ auto rright = std::dynamic_pointer_cast(left); + return (*rleft) > (*rright); + } + +diff --git a/api/logic/java/JavaUtils.cpp b/api/logic/java/JavaUtils.cpp +index 5f004a10..6d633631 100644 +--- a/api/logic/java/JavaUtils.cpp ++++ b/api/logic/java/JavaUtils.cpp +@@ -350,7 +350,6 @@ QList JavaUtils::FindJavaPaths() + qDebug() << "Linux Java detection incomplete - defaulting to \"java\""; + + QList javas; +- javas.append(this->GetDefaultJava()->path); + auto scanJavaDir = [&](const QString & dirPath) + { + QDir dir(dirPath); +@@ -379,6 +378,7 @@ QList JavaUtils::FindJavaPaths() + // general locations used by distro packaging + scanJavaDir("/usr/lib/jvm"); + scanJavaDir("/usr/lib32/jvm"); ++ javas.append(this->GetDefaultJava()->path); + // javas stored in MultiMC's folder + scanJavaDir("java"); + return javas; +-- +2.31.1 + diff --git a/third_party/nixpkgs/pkgs/games/multimc/default.nix b/third_party/nixpkgs/pkgs/games/multimc/default.nix index bedf78102b..aa32efaa94 100644 --- a/third_party/nixpkgs/pkgs/games/multimc/default.nix +++ b/third_party/nixpkgs/pkgs/games/multimc/default.nix @@ -1,20 +1,28 @@ -{ lib, mkDerivation, fetchFromGitHub, cmake, jdk8, zlib, file, makeWrapper, xorg, libpulseaudio, qtbase, libGL }: +{ lib, mkDerivation, fetchFromGitHub, cmake, jdk8, jdk, zlib, file, makeWrapper, xorg, libpulseaudio, qtbase, libGL }: let - jdk = jdk8; libpath = with xorg; lib.makeLibraryPath [ libX11 libXext libXcursor libXrandr libXxf86vm libpulseaudio libGL ]; in mkDerivation rec { pname = "multimc"; - version = "0.6.12"; + version = "unstable-2021-06-21"; src = fetchFromGitHub { owner = "MultiMC"; repo = "MultiMC5"; - rev = version; - sha256 = "h2T023vrqemWhHiA2/gFleuUhIOucjwTgoExliFiYig="; + rev = "8179a89103833805d5374399d80a4305be1b8355"; + sha256 = "lPz6ZM7TjaixfwWMPaXijKZJQKFPrCegBhvbJ8Xg4P8="; fetchSubmodules = true; }; nativeBuildInputs = [ cmake file makeWrapper ]; - buildInputs = [ qtbase jdk zlib ]; + buildInputs = [ qtbase jdk8 zlib ]; + + patches = [ ./0001-pick-latest-java-first.patch ]; + + postPatch = '' + # hardcode jdk paths + substituteInPlace api/logic/java/JavaUtils.cpp \ + --replace 'scanJavaDir("/usr/lib/jvm")' 'javas.append("${jdk}/lib/openjdk/bin/java")' \ + --replace 'scanJavaDir("/usr/lib32/jvm")' 'javas.append("${jdk8}/lib/openjdk/bin/java")' + ''; cmakeFlags = [ "-DMultiMC_LAYOUT=lin-system" ]; @@ -23,7 +31,9 @@ in mkDerivation rec { install -Dm755 ../application/package/linux/multimc.desktop $out/share/applications/multimc.desktop # xorg.xrandr needed for LWJGL [2.9.2, 3) https://github.com/LWJGL/lwjgl/issues/128 - wrapProgram $out/bin/multimc --set GAME_LIBRARY_PATH /run/opengl-driver/lib:${libpath} --prefix PATH : ${jdk}/bin/:${xorg.xrandr}/bin/ + wrapProgram $out/bin/multimc \ + --set GAME_LIBRARY_PATH /run/opengl-driver/lib:${libpath} \ + --prefix PATH : ${lib.makeBinPath [ xorg.xrandr ]} ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/games/neverball/default.nix b/third_party/nixpkgs/pkgs/games/neverball/default.nix index 431dfd58a8..ba1d403207 100644 --- a/third_party/nixpkgs/pkgs/games/neverball/default.nix +++ b/third_party/nixpkgs/pkgs/games/neverball/default.nix @@ -2,9 +2,10 @@ , physfs }: stdenv.mkDerivation rec { - name = "neverball-1.6.0"; + pname = "neverball"; + version = "1.6.0"; src = fetchurl { - url = "https://neverball.org/${name}.tar.gz"; + url = "https://neverball.org/neverball-${version}.tar.gz"; sha256 = "184gm36c6p6vaa6gwrfzmfh86klhnb03pl40ahsjsvprlk667zkk"; }; diff --git a/third_party/nixpkgs/pkgs/games/nexuiz/default.nix b/third_party/nixpkgs/pkgs/games/nexuiz/default.nix index 84d8a62000..4082e853aa 100644 --- a/third_party/nixpkgs/pkgs/games/nexuiz/default.nix +++ b/third_party/nixpkgs/pkgs/games/nexuiz/default.nix @@ -3,7 +3,7 @@ unzip, zlib, curl, libjpeg, libpng, libvorbis, libtheora , libogg, libmodplug , # glx - libX11, libGLU, libGL, libXpm, libXext, libXxf86vm, libXxf86dga, alsaLib + libX11, libGLU, libGL, libXpm, libXext, libXxf86vm, libXxf86dga, alsa-lib , # sdl SDL }: @@ -24,7 +24,7 @@ in stdenv.mkDerivation { nativeBuildInputs = [ unzip ]; buildInputs = [ # glx - libX11 libGLU libGL libXpm libXext libXxf86vm libXxf86dga alsaLib + libX11 libGLU libGL libXpm libXext libXxf86vm libXxf86dga alsa-lib # sdl SDL ]; diff --git a/third_party/nixpkgs/pkgs/games/njam/default.nix b/third_party/nixpkgs/pkgs/games/njam/default.nix index 1833840d2e..6fbffc37d0 100644 --- a/third_party/nixpkgs/pkgs/games/njam/default.nix +++ b/third_party/nixpkgs/pkgs/games/njam/default.nix @@ -1,10 +1,11 @@ {lib, stdenv, fetchurl, SDL, SDL_image, SDL_mixer, SDL_net }: -stdenv.mkDerivation { - name = "njam-1.25"; +stdenv.mkDerivation rec { + pname = "njam"; + version = "1.25"; src = fetchurl { - url = "mirror://sourceforge/njam/njam-1.25-src.tar.gz"; + url = "mirror://sourceforge/njam/njam-${version}-src.tar.gz"; sha256 = "0ysvqw017xkvddj957pdfmbmji7qi20nyr7f0zxvcvm6c7d3cc7s"; }; diff --git a/third_party/nixpkgs/pkgs/games/oh-my-git/default.nix b/third_party/nixpkgs/pkgs/games/oh-my-git/default.nix index 89dc1bdd50..542effa659 100644 --- a/third_party/nixpkgs/pkgs/games/oh-my-git/default.nix +++ b/third_party/nixpkgs/pkgs/games/oh-my-git/default.nix @@ -3,7 +3,7 @@ , fetchFromGitHub , makeDesktopItem , stdenv -, alsaLib +, alsa-lib , gcc-unwrapped , git , godot-export-templates @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - alsaLib + alsa-lib gcc-unwrapped.lib git libGLU diff --git a/third_party/nixpkgs/pkgs/games/opendune/default.nix b/third_party/nixpkgs/pkgs/games/opendune/default.nix index 0c9c71e38d..32e1ef4fca 100644 --- a/third_party/nixpkgs/pkgs/games/opendune/default.nix +++ b/third_party/nixpkgs/pkgs/games/opendune/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchFromGitHub, pkg-config -, alsaLib, libpulseaudio, SDL2, SDL2_image, SDL2_mixer }: +, alsa-lib, libpulseaudio, SDL2, SDL2_image, SDL2_mixer }: # - set the opendune configuration at ~/.config/opendune/opendune.ini: # [opendune] @@ -18,13 +18,13 @@ stdenv.mkDerivation rec { }; configureFlags = [ - "--with-alsa=${lib.getLib alsaLib}/lib/libasound.so" + "--with-alsa=${lib.getLib alsa-lib}/lib/libasound.so" "--with-pulse=${lib.getLib libpulseaudio}/lib/libpulse.so" ]; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib libpulseaudio SDL2 SDL2_image SDL2_mixer ]; + buildInputs = [ alsa-lib libpulseaudio SDL2 SDL2_image SDL2_mixer ]; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/games/openlierox/default.nix b/third_party/nixpkgs/pkgs/games/openlierox/default.nix index fefac190b0..12d00f28ff 100644 --- a/third_party/nixpkgs/pkgs/games/openlierox/default.nix +++ b/third_party/nixpkgs/pkgs/games/openlierox/default.nix @@ -1,8 +1,9 @@ { lib, stdenv, fetchurl, libX11, xorgproto, gd, SDL, SDL_image, SDL_mixer, zlib , libxml2, pkg-config, curl, cmake, libzip }: -stdenv.mkDerivation { - name = "openlierox-0.58rc3"; +stdenv.mkDerivation rec { + pname = "openlierox"; + version = "0.58rc3"; src = fetchurl { url = "mirror://sourceforge/openlierox/OpenLieroX_0.58_rc3.src.tar.bz2"; diff --git a/third_party/nixpkgs/pkgs/games/openra/engine.nix b/third_party/nixpkgs/pkgs/games/openra/engine.nix index 365dc3d267..adc1bf76e0 100644 --- a/third_party/nixpkgs/pkgs/games/openra/engine.nix +++ b/third_party/nixpkgs/pkgs/games/openra/engine.nix @@ -17,7 +17,6 @@ with lib; stdenv.mkDerivation (recursiveUpdate packageAttrs rec { - name = "${pname}-${version}"; pname = "openra"; version = "${engine.name}-${engine.version}"; diff --git a/third_party/nixpkgs/pkgs/games/orthorobot/default.nix b/third_party/nixpkgs/pkgs/games/orthorobot/default.nix index e1067645b6..c168af81ad 100644 --- a/third_party/nixpkgs/pkgs/games/orthorobot/default.nix +++ b/third_party/nixpkgs/pkgs/games/orthorobot/default.nix @@ -1,9 +1,15 @@ { lib, stdenv, fetchurl, fetchFromGitHub, zip, love, lua, makeWrapper, makeDesktopItem }: - -let +stdenv.mkDerivation rec { pname = "orthorobot"; version = "1.1.1"; + src = fetchFromGitHub { + owner = "Stabyourself"; + repo = pname; + rev = "v${version}"; + sha256 = "1ca6hvd890kxmamsmsfiqzw15ngsvb4lkihjb6kabgmss61a6s5p"; + }; + icon = fetchurl { url = "http://stabyourself.net/images/screenshots/orthorobot-5.png"; sha256 = "13fa4divdqz4vpdij1lcs5kf6w2c4jm3cc9q6bz5h7lkng31jzi6"; @@ -19,25 +25,12 @@ let categories = "Game;"; }; -in - -stdenv.mkDerivation { - name = "${pname}-${version}"; - - src = fetchFromGitHub { - owner = "Stabyourself"; - repo = pname; - rev = "v${version}"; - sha256 = "1ca6hvd890kxmamsmsfiqzw15ngsvb4lkihjb6kabgmss61a6s5p"; - }; - nativeBuildInputs = [ makeWrapper ]; buildInputs = [ lua love zip ]; - phases = [ "unpackPhase" "installPhase" ]; + dontBuild = true; - installPhase = - '' + installPhase = '' mkdir -p $out/bin $out/share/games/lovegames $out/share/applications zip -9 -r ${pname}.love ./* mv ${pname}.love $out/share/games/lovegames/${pname}.love @@ -53,5 +46,4 @@ stdenv.mkDerivation { license = licenses.free; downloadPage = "http://stabyourself.net/orthorobot/"; }; - } diff --git a/third_party/nixpkgs/pkgs/games/osu-lazer/default.nix b/third_party/nixpkgs/pkgs/games/osu-lazer/default.nix index 4cde6b032e..efdcbe9b36 100644 --- a/third_party/nixpkgs/pkgs/games/osu-lazer/default.nix +++ b/third_party/nixpkgs/pkgs/games/osu-lazer/default.nix @@ -1,11 +1,11 @@ { lib, stdenv, fetchFromGitHub, fetchurl, makeWrapper, makeDesktopItem, linkFarmFromDrvs , dotnetCorePackages, dotnetPackages, cacert -, ffmpeg_4, alsaLib, SDL2, lttng-ust, numactl, alsaPlugins +, ffmpeg_4, alsa-lib, SDL2, lttng-ust, numactl, alsa-plugins }: let runtimeDeps = [ - ffmpeg_4 alsaLib SDL2 lttng-ust numactl + ffmpeg_4 alsa-lib SDL2 lttng-ust numactl ]; dotnet-sdk = dotnetCorePackages.sdk_5_0; @@ -16,13 +16,13 @@ let in stdenv.mkDerivation rec { pname = "osu-lazer"; - version = "2021.602.0"; + version = "2021.612.0"; src = fetchFromGitHub { owner = "ppy"; repo = "osu"; rev = version; - sha256 = "t9Byn3eAAkxnBQBfdvz2CGGXu8d3JzTnSz7I68Ntp3A="; + sha256 = "1hrk8sfg4bdrrrqpwb5a8dhpy0lfnrx575z3l2jygzbwgqgr4jy4"; }; patches = [ ./bypass-tamper-detection.patch ]; diff --git a/third_party/nixpkgs/pkgs/games/osu-lazer/deps.nix b/third_party/nixpkgs/pkgs/games/osu-lazer/deps.nix index 0b6579bae0..d0a5717175 100644 --- a/third_party/nixpkgs/pkgs/games/osu-lazer/deps.nix +++ b/third_party/nixpkgs/pkgs/games/osu-lazer/deps.nix @@ -301,8 +301,8 @@ }) (fetchNuGet { name = "Markdig"; - version = "0.22.1"; - sha256 = "1m62kjwz93h323w8qvwmld2g8dy17a3ny5wyy29pwqj7ig4y8ymj"; + version = "0.24.0"; + sha256 = "03i0mw9717xwf3pffr8ar7k7fmyhgdw222j58l4x0xr4slpg94l7"; }) (fetchNuGet { name = "MessagePack"; @@ -374,6 +374,11 @@ version = "1.0.0"; sha256 = "00dx5armvkqjxvkldz3invdlck9nj7w21dlsr2aqp1rqbyrbsbbh"; }) + (fetchNuGet { + name = "Microsoft.Bcl.AsyncInterfaces"; + version = "1.1.0"; + sha256 = "1dq5yw7cy6s42193yl4iqscfw5vzkjkgv0zyy32scr4jza6ni1a1"; + }) (fetchNuGet { name = "Microsoft.Bcl.AsyncInterfaces"; version = "5.0.0"; @@ -446,13 +451,13 @@ }) (fetchNuGet { name = "Microsoft.Diagnostics.NETCore.Client"; - version = "0.2.61701"; - sha256 = "1ic1607jj4ln8dbibf1fz5v9svk9x2kqlgvhndc6ijaqnbc4wcr1"; + version = "0.2.221401"; + sha256 = "1k55l60bg8lj5ayl3kixbzvx2684xd7a9nzha5fiqjgp85cimb3r"; }) (fetchNuGet { name = "Microsoft.Diagnostics.Runtime"; - version = "2.0.222201"; - sha256 = "1vsa6xbqi4f2mx85rjmq641r9zgssj0bbfcsqlsa5nx6lqh2rf2q"; + version = "2.0.226801"; + sha256 = "1w8ahqkv8nbq2ch17aa9axhqqnybmc9bsxpdhpiy52ix70mr72w1"; }) (fetchNuGet { name = "Microsoft.DotNet.PlatformAbstractions"; @@ -571,8 +576,8 @@ }) (fetchNuGet { name = "Microsoft.Extensions.ObjectPool"; - version = "5.0.5"; - sha256 = "0hh0xm14hp479dsd0gb9igz0vbbn3sak27v39phpyilxvk7ky5z1"; + version = "5.0.6"; + sha256 = "0kwhcnsagwn3x9ms2sfy5js25gfnipkrakqgn7bbg0a1k35qa5xx"; }) (fetchNuGet { name = "Microsoft.Extensions.Options"; @@ -751,13 +756,13 @@ }) (fetchNuGet { name = "ppy.LocalisationAnalyser"; - version = "2021.525.0"; - sha256 = "1h8p8d1xk03904fifhi77zrjkh4sknp4mxjqd3nbpfyikd8f7c8p"; + version = "2021.608.0"; + sha256 = "1lsb7nr2gynz7llbl22f5mrd9hlxaq48gssfcn5qfji7afv8kwql"; }) (fetchNuGet { name = "ppy.osu.Framework"; - version = "2021.601.0"; - sha256 = "0y17s60r4q0c05gm67fmp700zwb7k74xdi45hprblyxsplnbkmi0"; + version = "2021.611.0"; + sha256 = "14a2032khf2ys51rp6qs3ikp0lvqxgdqh0hbvchj34q0l3g40yv0"; }) (fetchNuGet { name = "ppy.osu.Framework.NativeLibs"; @@ -766,8 +771,8 @@ }) (fetchNuGet { name = "ppy.osu.Game.Resources"; - version = "2021.525.0"; - sha256 = "15ksxv5fasfzdkmwikjbn17c1d4rssjfm2vp71b7m834ghm6pnbd"; + version = "2021.611.0"; + sha256 = "01pbxccfrwzn47xg9xgjn91l6w3d0d3gqkkx53ak7ynxbbvx9q07"; }) (fetchNuGet { name = "ppy.osuTK.NS20"; @@ -1009,11 +1014,6 @@ version = "1.5.0"; sha256 = "1d5gjn5afnrf461jlxzawcvihz195gayqpcfbv6dd7pxa9ialn06"; }) - (fetchNuGet { - name = "System.Collections.Immutable"; - version = "1.7.1"; - sha256 = "1nh4nlxfc7lbnbl86wwk1a3jwl6myz5j6hvgh5sp4krim9901hsq"; - }) (fetchNuGet { name = "System.Collections.Immutable"; version = "5.0.0"; @@ -1379,11 +1379,6 @@ version = "4.3.0"; sha256 = "02bly8bdc98gs22lqsfx9xicblszr2yan7v2mmw3g7hy6miq5hwq"; }) - (fetchNuGet { - name = "System.Reflection.Metadata"; - version = "1.8.1"; - sha256 = "17xxl3m99wa4hcpqy42vl8qb1jk2jfq32rj3sfjc1a46hi2si5jj"; - }) (fetchNuGet { name = "System.Reflection.Metadata"; version = "5.0.0"; @@ -1444,11 +1439,6 @@ version = "4.5.3"; sha256 = "1afi6s2r1mh1kygbjmfba6l4f87pi5sg13p4a48idqafli94qxln"; }) - (fetchNuGet { - name = "System.Runtime.CompilerServices.Unsafe"; - version = "4.7.1"; - sha256 = "119br3pd85lq8zcgh4f60jzmv1g976q1kdgi3hvqdlhfbw6siz2j"; - }) (fetchNuGet { name = "System.Runtime.CompilerServices.Unsafe"; version = "5.0.0"; @@ -1699,6 +1689,11 @@ version = "4.3.0"; sha256 = "1xxcx2xh8jin360yjwm4x4cf5y3a2bwpn2ygkfkwkicz7zk50s2z"; }) + (fetchNuGet { + name = "System.Threading.Tasks.Extensions"; + version = "4.5.2"; + sha256 = "1sh63dz0dymqcwmprp0nadm77b83vmm7lyllpv578c397bslb8hj"; + }) (fetchNuGet { name = "System.Threading.Tasks.Extensions"; version = "4.5.3"; diff --git a/third_party/nixpkgs/pkgs/games/papermc/default.nix b/third_party/nixpkgs/pkgs/games/papermc/default.nix index f5bf9573e6..72612394fe 100644 --- a/third_party/nixpkgs/pkgs/games/papermc/default.nix +++ b/third_party/nixpkgs/pkgs/games/papermc/default.nix @@ -1,10 +1,10 @@ { lib, stdenv, fetchurl, bash, jre }: let mcVersion = "1.16.5"; - buildNum = "488"; + buildNum = "771"; jar = fetchurl { - url = "https://papermc.io/api/v1/paper/${mcVersion}/${buildNum}/download"; - sha256 = "07zgq6pfgwd9a9daqv1dab0q8cwgidsn6sszn7bpr37y457a4ka8"; + url = "https://papermc.io/api/v1/paper/${mcVersion}/${buildNum}/download"; + sha256 = "1lmlfhigbzbkgzfq6knglka0ccf4i32ch25gkny0c5fllmsnm08l"; }; in stdenv.mkDerivation { pname = "papermc"; diff --git a/third_party/nixpkgs/pkgs/games/planetaryannihilation/default.nix b/third_party/nixpkgs/pkgs/games/planetaryannihilation/default.nix index 7dbca783b6..c29af6d810 100644 --- a/third_party/nixpkgs/pkgs/games/planetaryannihilation/default.nix +++ b/third_party/nixpkgs/pkgs/games/planetaryannihilation/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, config, fetchurl, patchelf, makeWrapper, gtk2, glib, udev, alsaLib, atk +{ lib, stdenv, config, fetchurl, patchelf, makeWrapper, gtk2, glib, udev, alsa-lib, atk , nspr, fontconfig, cairo, pango, nss, freetype, gnome2, gdk-pixbuf, curl, systemd, xorg }: # TODO: use dynamic attributes once Nix 1.7 is out @@ -34,7 +34,7 @@ stdenv.mkDerivation { ln -s ${systemd}/lib/libudev.so.1 $out/lib/libudev.so.0 patchelf --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" "$out/PA" - patchelf --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" --set-rpath "${lib.makeLibraryPath [ stdenv.cc.cc.lib xorg.libXdamage xorg.libXfixes gtk2 glib stdenv.glibc.out "$out" xorg.libXext pango udev xorg.libX11 xorg.libXcomposite alsaLib atk nspr fontconfig cairo pango nss freetype gnome2.GConf gdk-pixbuf xorg.libXrender ]}:{stdenv.cc.cc.lib}/lib64:${stdenv.glibc.out}/lib64" "$out/host/CoherentUI_Host" + patchelf --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" --set-rpath "${lib.makeLibraryPath [ stdenv.cc.cc.lib xorg.libXdamage xorg.libXfixes gtk2 glib stdenv.glibc.out "$out" xorg.libXext pango udev xorg.libX11 xorg.libXcomposite alsa-lib atk nspr fontconfig cairo pango nss freetype gnome2.GConf gdk-pixbuf xorg.libXrender ]}:{stdenv.cc.cc.lib}/lib64:${stdenv.glibc.out}/lib64" "$out/host/CoherentUI_Host" wrapProgram $out/PA --prefix LD_LIBRARY_PATH : "${lib.makeLibraryPath [ stdenv.cc.cc.lib stdenv.glibc.out xorg.libX11 xorg.libXcursor gtk2 glib curl "$out" ]}:${stdenv.cc.cc.lib}/lib64:${stdenv.glibc.out}/lib64" diff --git a/third_party/nixpkgs/pkgs/games/pokerth/default.nix b/third_party/nixpkgs/pkgs/games/pokerth/default.nix index 59555a8ac2..349dd5d85c 100644 --- a/third_party/nixpkgs/pkgs/games/pokerth/default.nix +++ b/third_party/nixpkgs/pkgs/games/pokerth/default.nix @@ -15,7 +15,7 @@ let in mkDerivation rec { - name = "pokerth-${target}-${version}"; + pname = "pokerth-${target}"; version = "1.1.2"; src = fetchFromGitHub { diff --git a/third_party/nixpkgs/pkgs/games/pong3d/default.nix b/third_party/nixpkgs/pkgs/games/pong3d/default.nix index 3cd017e8d3..9e965c9548 100644 --- a/third_party/nixpkgs/pkgs/games/pong3d/default.nix +++ b/third_party/nixpkgs/pkgs/games/pong3d/default.nix @@ -1,9 +1,10 @@ {lib, stdenv, fetchurl, libX11}: -stdenv.mkDerivation { - name = "3dpong-0.5"; +stdenv.mkDerivation rec { + pname = "3dpong"; + version = "0.5"; src = fetchurl { - url = "ftp://ftp.tuxpaint.org/unix/x/3dpong/src/3dpong-0.5.tar.gz"; + url = "ftp://ftp.tuxpaint.org/unix/x/3dpong/src/3dpong-${version}.tar.gz"; sha256 = "1ibb79sbzlbn4ra3n0qk22gqr6fg7q0jy6cm0wg2qj4z64c7hmdi"; }; diff --git a/third_party/nixpkgs/pkgs/games/prboom/default.nix b/third_party/nixpkgs/pkgs/games/prboom/default.nix index 4bd59c9e39..8adc9645b7 100644 --- a/third_party/nixpkgs/pkgs/games/prboom/default.nix +++ b/third_party/nixpkgs/pkgs/games/prboom/default.nix @@ -7,9 +7,10 @@ assert useOpenGL -> libGL != null && libGLU != null; stdenv.mkDerivation rec { - name = "prboom-2.5.0"; + pname = "prboom"; + version = "2.5.0"; src = fetchurl { - url = "mirror://sourceforge/prboom/prboom-2.5.0.tar.gz"; + url = "mirror://sourceforge/prboom/prboom-${version}.tar.gz"; sha256 = "1bjb04q8dk232956k30qlpq6q0hxb904yh1nflr87jcc1x3iqv12"; }; diff --git a/third_party/nixpkgs/pkgs/games/quake2/yquake2/games.nix b/third_party/nixpkgs/pkgs/games/quake2/yquake2/games.nix index 02b1304891..0c9b24963b 100644 --- a/third_party/nixpkgs/pkgs/games/quake2/yquake2/games.nix +++ b/third_party/nixpkgs/pkgs/games/quake2/yquake2/games.nix @@ -28,7 +28,7 @@ let inherit (data) id version description sha256; inherit title; - name = "yquake2-${title}-${version}"; + pname = "yquake2-${title}"; src = fetchFromGitHub { inherit sha256; diff --git a/third_party/nixpkgs/pkgs/games/quake3/quake3e/default.nix b/third_party/nixpkgs/pkgs/games/quake3/quake3e/default.nix index 691406160d..25c6b4ddec 100644 --- a/third_party/nixpkgs/pkgs/games/quake3/quake3e/default.nix +++ b/third_party/nixpkgs/pkgs/games/quake3/quake3e/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, curl, libGL, libX11, libXxf86dga, alsaLib, libXrandr, libXxf86vm, libXext, fetchFromGitHub }: +{ lib, stdenv, curl, libGL, libX11, libXxf86dga, alsa-lib, libXrandr, libXxf86vm, libXext, fetchFromGitHub }: stdenv.mkDerivation rec { pname = "Quake3e"; @@ -11,12 +11,12 @@ stdenv.mkDerivation rec { sha256 = "1jvk8qd0mi0x8lslknhkfd8h6ridwca34c6qahsbmmpcgsvdv16s"; }; - buildInputs = [ curl libGL libX11 libXxf86dga alsaLib libXrandr libXxf86vm libXext ]; + buildInputs = [ curl libGL libX11 libXxf86dga alsa-lib libXrandr libXxf86vm libXext ]; enableParallelBuilding = true; postPatch = '' sed -i -e 's#OpenGLLib = dlopen( dllname#OpenGLLib = dlopen( "${libGL}/lib/libGL.so"#' code/unix/linux_qgl.c - sed -i -e 's#Sys_LoadLibrary( "libasound.so.2" )#Sys_LoadLibrary( "${alsaLib}/lib/libasound.so.2" )#' code/unix/linux_snd.c + sed -i -e 's#Sys_LoadLibrary( "libasound.so.2" )#Sys_LoadLibrary( "${alsa-lib}/lib/libasound.so.2" )#' code/unix/linux_snd.c sed -i -e 's#Sys_LoadLibrary( "libXrandr.so.2" )#Sys_LoadLibrary( "${libXrandr}/lib/libXrandr.so.2" )#' code/unix/x11_randr.c sed -i -e 's#Sys_LoadLibrary( "libXxf86vm.so.1" )#Sys_LoadLibrary( "${libXxf86vm}/lib/libXxf86vm.so.1" )#' code/unix/x11_randr.c sed -i -e 's#Sys_LoadLibrary( "libXxf86dga.so.1" )#Sys_LoadLibrary( "${libXxf86dga}/lib/libXxf86dga.so.1" )#' code/unix/x11_dga.c diff --git a/third_party/nixpkgs/pkgs/games/racer/default.nix b/third_party/nixpkgs/pkgs/games/racer/default.nix index 16507fa219..bdb56c85db 100644 --- a/third_party/nixpkgs/pkgs/games/racer/default.nix +++ b/third_party/nixpkgs/pkgs/games/racer/default.nix @@ -1,13 +1,14 @@ { fetchurl, lib, stdenv, allegro, libjpeg, makeWrapper }: -stdenv.mkDerivation { - name = "racer-1.1"; +stdenv.mkDerivation rec { + pname = "racer"; + version = "1.1"; src = if stdenv.hostPlatform.system == "i686-linux" then fetchurl { - url = "http://hippo.nipax.cz/src/racer-1.1.tar.gz"; + url = "http://hippo.nipax.cz/src/racer-${version}.tar.gz"; sha256 = "0fll1qkqfcjq87k0jzsilcw701z92lfxn2y5ga1n038772lymxl9"; } else if stdenv.hostPlatform.system == "x86_64-linux" then fetchurl { - url = "https://hippo.nipax.cz/src/racer-1.1.64.tar.gz"; + url = "https://hippo.nipax.cz/src/racer-${version}.64.tar.gz"; sha256 = "0rjy3gmlhwfkb9zs58j0mc0dar0livwpbc19r6zw5r2k6r7xdan0"; } else throw "System not supported"; diff --git a/third_party/nixpkgs/pkgs/games/residualvm/default.nix b/third_party/nixpkgs/pkgs/games/residualvm/default.nix index 51dd4f9086..9a836c5950 100644 --- a/third_party/nixpkgs/pkgs/games/residualvm/default.nix +++ b/third_party/nixpkgs/pkgs/games/residualvm/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, SDL, zlib, libmpeg2, libmad, libogg, libvorbis, flac, alsaLib +{ lib, stdenv, fetchurl, SDL, zlib, libmpeg2, libmad, libogg, libvorbis, flac, alsa-lib , libGLSupported ? lib.elem stdenv.hostPlatform.system lib.platforms.mesaPlatforms , openglSupport ? libGLSupported, libGLU, libGL ? null }: @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { sha256 = "99c419b13885a49bdfc10a50a3a6000fd1ba9504f6aae04c74b840ec6f57a963"; }; - buildInputs = [ stdenv SDL zlib libmpeg2 libmad libogg libvorbis flac alsaLib ] + buildInputs = [ stdenv SDL zlib libmpeg2 libmad libogg libvorbis flac alsa-lib ] ++ lib.optionals openglSupport [ libGL libGLU ]; configureFlags = [ "--enable-all-engines" ]; diff --git a/third_party/nixpkgs/pkgs/games/rili/default.nix b/third_party/nixpkgs/pkgs/games/rili/default.nix index 0e3fa9b8cc..a0082d28d5 100644 --- a/third_party/nixpkgs/pkgs/games/rili/default.nix +++ b/third_party/nixpkgs/pkgs/games/rili/default.nix @@ -1,10 +1,11 @@ { lib, stdenv, fetchurl, SDL_mixer, SDL, autoreconfHook }: -stdenv.mkDerivation { - name = "ri_li-2.0.1"; +stdenv.mkDerivation rec { + pname = "ri_li"; + version = "2.0.1"; src = fetchurl { - url = "mirror://sourceforge/ri-li/Ri-li-2.0.1.tar.bz2"; + url = "mirror://sourceforge/ri-li/Ri-li-${version}.tar.bz2"; sha256 = "f71ccc20c37c601358d963e087ac0d524de8c68e96df09c3aac1ae65edd38dbd"; }; diff --git a/third_party/nixpkgs/pkgs/games/rimshot/default.nix b/third_party/nixpkgs/pkgs/games/rimshot/default.nix index e7f2f2e781..1f4efa5097 100644 --- a/third_party/nixpkgs/pkgs/games/rimshot/default.nix +++ b/third_party/nixpkgs/pkgs/games/rimshot/default.nix @@ -1,9 +1,14 @@ { lib, stdenv, fetchurl, unzip, love, lua, makeWrapper, makeDesktopItem }: -let +stdenv.mkDerivation rec { pname = "rimshot"; version = "1.0"; + src = fetchurl { + url = "https://stabyourself.net/dl.php?file=${pname}/${pname}-source.zip"; + sha256 = "08pdkyvki92549605m9bqnr24ipkbwkp5nkr5aagdqnr8ai4rgmi"; + }; + icon = fetchurl { url = "http://stabyourself.net/images/screenshots/rimshot-2.png"; sha256 = "08fyiqym3gcpq2vgb5dvafkban42fsbzfcr3iiyw03hz99q53psd"; @@ -19,16 +24,6 @@ let categories = "Audio;AudioVideo;Music"; }; -in - -stdenv.mkDerivation { - name = "${pname}-${version}"; - - src = fetchurl { - url = "http://stabyourself.net/dl.php?file=${pname}/${pname}-source.zip"; - sha256 = "08pdkyvki92549605m9bqnr24ipkbwkp5nkr5aagdqnr8ai4rgmi"; - }; - nativeBuildInputs = [ makeWrapper unzip ]; buildInputs = [ lua love ]; diff --git a/third_party/nixpkgs/pkgs/games/rocksndiamonds/default.nix b/third_party/nixpkgs/pkgs/games/rocksndiamonds/default.nix index c31bf78a35..fd570e4d7c 100644 --- a/third_party/nixpkgs/pkgs/games/rocksndiamonds/default.nix +++ b/third_party/nixpkgs/pkgs/games/rocksndiamonds/default.nix @@ -1,12 +1,11 @@ { lib, stdenv, fetchurl, makeDesktopItem, SDL2, SDL2_image, SDL2_mixer, SDL2_net }: stdenv.mkDerivation rec { - name = "${project}-${version}"; - project = "rocksndiamonds"; + pname = "rocksndiamonds"; version = "4.1.1.0"; src = fetchurl { - url = "https://www.artsoft.org/RELEASES/unix/${project}/${name}.tar.gz"; + url = "https://www.artsoft.org/RELEASES/unix/${pname}/rocksndiamonds-${version}.tar.gz"; sha256 = "1k0m6l5g886d9mwwh6q0gw75qsb85mpf8i0rglh047app56nsk72"; }; diff --git a/third_party/nixpkgs/pkgs/games/rogue/default.nix b/third_party/nixpkgs/pkgs/games/rogue/default.nix index 1e215c813b..127d65ff36 100644 --- a/third_party/nixpkgs/pkgs/games/rogue/default.nix +++ b/third_party/nixpkgs/pkgs/games/rogue/default.nix @@ -1,13 +1,14 @@ {lib, stdenv, fetchurl, ncurses}: -stdenv.mkDerivation { - name = "rogue-5.4.4"; +stdenv.mkDerivation rec { + pname = "rogue"; + version = "5.4.4"; src = fetchurl { urls = [ - "https://src.fedoraproject.org/repo/pkgs/rogue/rogue5.4.4-src.tar.gz/033288f46444b06814c81ea69d96e075/rogue5.4.4-src.tar.gz" - "http://ftp.vim.org/ftp/pub/ftp/os/Linux/distr/slitaz/sources/packages-cooking/r/rogue5.4.4-src.tar.gz" - "http://rogue.rogueforge.net/files/rogue5.4/rogue5.4.4-src.tar.gz" + "https://src.fedoraproject.org/repo/pkgs/rogue/rogue${version}-src.tar.gz/033288f46444b06814c81ea69d96e075/rogue${version}-src.tar.gz" + "http://ftp.vim.org/ftp/pub/ftp/os/Linux/distr/slitaz/sources/packages-cooking/r/rogue${version}-src.tar.gz" + "http://rogue.rogueforge.net/files/rogue${lib.versions.majorMinor version}/rogue${version}-src.tar.gz" ]; sha256 = "18g81274d0f7sr04p7h7irz0d53j6kd9j1y3zbka1gcqq0gscdvx"; }; diff --git a/third_party/nixpkgs/pkgs/games/rpg-cli/default.nix b/third_party/nixpkgs/pkgs/games/rpg-cli/default.nix index 0c3a58c98a..44e35c3787 100644 --- a/third_party/nixpkgs/pkgs/games/rpg-cli/default.nix +++ b/third_party/nixpkgs/pkgs/games/rpg-cli/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "rpg-cli"; - version = "0.3.0"; + version = "0.5.0"; src = fetchFromGitHub { owner = "facundoolano"; repo = pname; rev = version; - sha256 = "sha256-pcVxUX6CPIE5GJniXbAiwZQjwv2eer8LevFl6gASKmM="; + sha256 = "sha256-LRTHnYxjPraVISAERT6XJGKIA3YJIilgEwU6olq2CRc="; }; - cargoSha256 = "sha256-4DB3Zj9awmKX5t1zCgWxetz/+tl6ojpCEKxWpZFlMcw="; + cargoSha256 = "sha256-ZlQy/JiYKDKPCEWrAFvKV6WsAkk2zsPpfJADB+kPyuo="; # tests assume the authors macbook, and thus fail doCheck = false; diff --git a/third_party/nixpkgs/pkgs/games/sauerbraten/default.nix b/third_party/nixpkgs/pkgs/games/sauerbraten/default.nix index 2d5f3d9a3c..1e43674d2a 100644 --- a/third_party/nixpkgs/pkgs/games/sauerbraten/default.nix +++ b/third_party/nixpkgs/pkgs/games/sauerbraten/default.nix @@ -38,6 +38,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "A free multiplayer & singleplayer first person shooter, the successor of the Cube FPS"; maintainers = with maintainers; [ raskin ajs124 ]; + mainProgram = "sauerbraten_client"; hydraPlatforms = # raskin: tested amd64-linux; # not setting platforms because it is 0.5+ GiB of game data diff --git a/third_party/nixpkgs/pkgs/games/scid-vs-pc/default.nix b/third_party/nixpkgs/pkgs/games/scid-vs-pc/default.nix index 33373e0e7b..2837f96357 100644 --- a/third_party/nixpkgs/pkgs/games/scid-vs-pc/default.nix +++ b/third_party/nixpkgs/pkgs/games/scid-vs-pc/default.nix @@ -1,6 +1,6 @@ -{ lib, stdenv, fetchurl, tcl, tk, libX11, zlib, makeWrapper, makeDesktopItem }: +{ lib, fetchurl, tcl, tk, libX11, zlib, makeWrapper, makeDesktopItem }: -stdenv.mkDerivation rec { +tcl.mkTclDerivation rec { pname = "scid-vs-pc"; version = "4.21"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ makeWrapper ]; - buildInputs = [ tcl tk libX11 zlib ]; + buildInputs = [ tk libX11 zlib ]; prePatch = '' sed -i -e '/^ *set headerPath *{/a ${tcl}/include ${tk}/include' \ @@ -49,7 +49,6 @@ stdenv.mkDerivation rec { for cmd in $out/bin/* ; do wrapProgram "$cmd" \ - --set TCLLIBPATH "${tcl}/${tcl.libdir}" \ --set TK_LIBRARY "${tk}/lib/${tk.libPrefix}" done ''; @@ -79,4 +78,3 @@ stdenv.mkDerivation rec { platforms = lib.platforms.linux; }; } - diff --git a/third_party/nixpkgs/pkgs/games/scid/default.nix b/third_party/nixpkgs/pkgs/games/scid/default.nix index 7b1a15c0a5..43794f6bc2 100644 --- a/third_party/nixpkgs/pkgs/games/scid/default.nix +++ b/third_party/nixpkgs/pkgs/games/scid/default.nix @@ -1,6 +1,6 @@ -{ lib, stdenv, fetchurl, tcl, tk, libX11, zlib, makeWrapper }: +{ lib, fetchurl, tcl, tk, libX11, zlib, makeWrapper }: -stdenv.mkDerivation { +tcl.mkTclDerivation { pname = "scid"; version = "4.3"; @@ -10,7 +10,7 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ makeWrapper ]; - buildInputs = [ tcl tk libX11 zlib ]; + buildInputs = [ tk libX11 zlib ]; prePatch = '' sed -i -e '/^ *set headerPath *{/a ${tcl}/include ${tk}/include' \ @@ -45,13 +45,13 @@ stdenv.mkDerivation { for cmd in $out/bin/* do wrapProgram "$cmd" \ - --set TCLLIBPATH "${tcl}/${tcl.libdir}" \ --set TK_LIBRARY "${tk}/lib/${tk.libPrefix}" done ''; meta = { description = "Chess database with play and training functionality"; + maintainers = with lib.maintainers; [ agbrooks ]; homepage = "http://scid.sourceforge.net/"; license = lib.licenses.gpl2; }; diff --git a/third_party/nixpkgs/pkgs/games/scrolls/default.nix b/third_party/nixpkgs/pkgs/games/scrolls/default.nix index 13079e1598..cdeab7b10d 100644 --- a/third_party/nixpkgs/pkgs/games/scrolls/default.nix +++ b/third_party/nixpkgs/pkgs/games/scrolls/default.nix @@ -2,7 +2,8 @@ , libGLU, libX11, libXext, libXcursor, libpulseaudio }: stdenv.mkDerivation { - name = "scrolls-2015-10-13"; + pname = "scrolls"; + version = "2015-10-13"; meta = { description = "A strategy collectible card game"; diff --git a/third_party/nixpkgs/pkgs/games/scummvm/default.nix b/third_party/nixpkgs/pkgs/games/scummvm/default.nix index 68ccb894d9..b22d292f20 100644 --- a/third_party/nixpkgs/pkgs/games/scummvm/default.nix +++ b/third_party/nixpkgs/pkgs/games/scummvm/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, nasm -, alsaLib, curl, flac, fluidsynth, freetype, libjpeg, libmad, libmpeg2, libogg, libvorbis, libGLU, libGL, SDL2, zlib +, alsa-lib, curl, flac, fluidsynth, freetype, libjpeg, libmad, libmpeg2, libogg, libvorbis, libGLU, libGL, SDL2, zlib , Cocoa, AudioToolbox, Carbon, CoreMIDI, AudioUnit, cctools }: @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ nasm ]; buildInputs = lib.optionals stdenv.isLinux [ - alsaLib + alsa-lib ] ++ lib.optionals stdenv.isDarwin [ Cocoa AudioToolbox Carbon CoreMIDI AudioUnit ] ++ [ diff --git a/third_party/nixpkgs/pkgs/games/sgt-puzzles/default.nix b/third_party/nixpkgs/pkgs/games/sgt-puzzles/default.nix index 2582161eee..1c0b7aeda4 100644 --- a/third_party/nixpkgs/pkgs/games/sgt-puzzles/default.nix +++ b/third_party/nixpkgs/pkgs/games/sgt-puzzles/default.nix @@ -4,7 +4,7 @@ }: stdenv.mkDerivation rec { - name = "sgt-puzzles-r${version}"; + pname = "sgt-puzzles"; version = "20200610.9aa7b7c"; src = fetchurl { diff --git a/third_party/nixpkgs/pkgs/games/shattered-pixel-dungeon/default.nix b/third_party/nixpkgs/pkgs/games/shattered-pixel-dungeon/default.nix index a11d698b80..ec18a26829 100644 --- a/third_party/nixpkgs/pkgs/games/shattered-pixel-dungeon/default.nix +++ b/third_party/nixpkgs/pkgs/games/shattered-pixel-dungeon/default.nix @@ -10,15 +10,15 @@ let pname = "shattered-pixel-dungeon"; - version = "0.9.2b"; + version = "0.9.3"; src = fetchFromGitHub { owner = "00-Evan"; repo = "shattered-pixel-dungeon"; # NOTE: always use the commit sha, not the tag. Tags _will_ disappear! # https://github.com/00-Evan/shattered-pixel-dungeon/issues/596 - rev = "eba806ef561921b86637cf26818e095556edec0d"; - sha256 = "05m4sfchccr437pxjvgzjk6nd9r3n4c4p3q8lxcc5pj6qrppk49j"; + rev = "785c869f2b61013a15fddbf5f0c65d67fe900e80"; + sha256 = "sha256-d7Fc1IPOW/0RwLYe9vwaD3gFw6div2/J0DOFdWYDXWY="; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/games/shticker-book-unwritten/default.nix b/third_party/nixpkgs/pkgs/games/shticker-book-unwritten/default.nix index 0179c7c86e..7dbd5c257e 100644 --- a/third_party/nixpkgs/pkgs/games/shticker-book-unwritten/default.nix +++ b/third_party/nixpkgs/pkgs/games/shticker-book-unwritten/default.nix @@ -6,7 +6,7 @@ let in buildFHSUserEnv { name = "shticker_book_unwritten"; targetPkgs = pkgs: with pkgs; [ - alsaLib + alsa-lib xorg.libX11 xorg.libXcursor xorg.libXext diff --git a/third_party/nixpkgs/pkgs/games/sienna/default.nix b/third_party/nixpkgs/pkgs/games/sienna/default.nix index 1a1e82b7d6..24f5fc0887 100644 --- a/third_party/nixpkgs/pkgs/games/sienna/default.nix +++ b/third_party/nixpkgs/pkgs/games/sienna/default.nix @@ -1,8 +1,12 @@ { lib, stdenv, fetchurl, love, lua, makeWrapper, makeDesktopItem }: -let +stdenv.mkDerivation rec { pname = "sienna"; version = "1.0c"; + src = fetchurl { + url = "https://github.com/SimonLarsen/${pname}/releases/download/v${version}/${pname}-${version}.love"; + sha256 = "1x15276fhqspgrrv8fzkp032i2qa8piywc0yy061x59mxhdndzj6"; + }; icon = fetchurl { url = "http://tangramgames.dk/img/thumb/sienna.png"; @@ -19,16 +23,6 @@ let categories = "Game;"; }; -in - -stdenv.mkDerivation { - name = "${pname}-${version}"; - - src = fetchurl { - url = "https://github.com/SimonLarsen/${pname}/releases/download/v${version}/${pname}-${version}.love"; - sha256 = "1x15276fhqspgrrv8fzkp032i2qa8piywc0yy061x59mxhdndzj6"; - }; - nativeBuildInputs = [ makeWrapper ]; buildInputs = [ lua love ]; diff --git a/third_party/nixpkgs/pkgs/games/snake4/default.nix b/third_party/nixpkgs/pkgs/games/snake4/default.nix index c0cad5f05d..aee8b9e081 100644 --- a/third_party/nixpkgs/pkgs/games/snake4/default.nix +++ b/third_party/nixpkgs/pkgs/games/snake4/default.nix @@ -1,10 +1,11 @@ { lib, stdenv, fetchurl, shhmsg, shhopt, xorg }: stdenv.mkDerivation rec { - name = "snake4-1.0.14"; + pname = "snake4"; + version = "1.0.14"; src = fetchurl { - url = "https://shh.thathost.com/pub-unix/files/${name}.tar.gz"; + url = "https://shh.thathost.com/pub-unix/files/snake4-${version}.tar.gz"; sha256 = "14cng9l857np42zixp440mbc8y5675frb6lhsds53j1cws9cncw9"; }; diff --git a/third_party/nixpkgs/pkgs/games/steam/fhsenv.nix b/third_party/nixpkgs/pkgs/games/steam/fhsenv.nix index 44bee8ff11..a0557eed9b 100644 --- a/third_party/nixpkgs/pkgs/games/steam/fhsenv.nix +++ b/third_party/nixpkgs/pkgs/games/steam/fhsenv.nix @@ -98,6 +98,7 @@ in buildFHSUserEnv rec { xorg.libXfixes libGL libva + pipewire.lib # Not formally in runtime but needed by some games at-spi2-atk @@ -135,7 +136,7 @@ in buildFHSUserEnv rec { libGLU libuuid libbsd - alsaLib + alsa-lib # Loop Hero libidn2 diff --git a/third_party/nixpkgs/pkgs/games/steam/fonts.nix b/third_party/nixpkgs/pkgs/games/steam/fonts.nix index 9cf68f2c29..65efd42a22 100644 --- a/third_party/nixpkgs/pkgs/games/steam/fonts.nix +++ b/third_party/nixpkgs/pkgs/games/steam/fonts.nix @@ -1,7 +1,8 @@ { stdenv, fetchurl, unzip }: stdenv.mkDerivation { - name = "steam-fonts-1"; + pname = "steam-fonts"; + version = "1"; src = fetchurl { url = "https://support.steampowered.com/downloads/1974-YFKL-4947/SteamFonts.zip"; diff --git a/third_party/nixpkgs/pkgs/games/steam/runtime-wrapped.nix b/third_party/nixpkgs/pkgs/games/steam/runtime-wrapped.nix index 8e4f5b866b..765ecbed28 100644 --- a/third_party/nixpkgs/pkgs/games/steam/runtime-wrapped.nix +++ b/third_party/nixpkgs/pkgs/games/steam/runtime-wrapped.nix @@ -6,7 +6,7 @@ let overridePkgs = lib.optionals (!runtimeOnly) (with pkgs; [ libgpgerror libpulseaudio - alsaLib + alsa-lib openalSoft libva1 libvdpau diff --git a/third_party/nixpkgs/pkgs/games/steam/runtime.nix b/third_party/nixpkgs/pkgs/games/steam/runtime.nix index b501df598e..ab2c19249a 100644 --- a/third_party/nixpkgs/pkgs/games/steam/runtime.nix +++ b/third_party/nixpkgs/pkgs/games/steam/runtime.nix @@ -8,11 +8,11 @@ stdenv.mkDerivation rec { pname = "steam-runtime"; # from https://repo.steampowered.com/steamrt-images-scout/snapshots/ - version = "0.20210317.0"; + version = "0.20210527.0"; src = fetchurl { url = "https://repo.steampowered.com/steamrt-images-scout/snapshots/${version}/steam-runtime.tar.xz"; - sha256 = "061z2r33n2017prmhdxm82cly3qp3bma2q70pqs57adl65yvg7vw"; + sha256 = "1880d1byn265w0vy5p98d8w8virnbywj707ydybj7rixhid2gzdc"; name = "scout-runtime-${version}.tar.gz"; }; diff --git a/third_party/nixpkgs/pkgs/games/stepmania/default.nix b/third_party/nixpkgs/pkgs/games/stepmania/default.nix index 1512359d49..70e1acb1f3 100644 --- a/third_party/nixpkgs/pkgs/games/stepmania/default.nix +++ b/third_party/nixpkgs/pkgs/games/stepmania/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchFromGitHub, cmake, nasm -, gtk2, glib, ffmpeg, alsaLib, libmad, libogg, libvorbis +, gtk2, glib, ffmpeg, alsa-lib, libmad, libogg, libvorbis , glew, libpulseaudio, udev }: @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake nasm ]; buildInputs = [ - gtk2 glib ffmpeg alsaLib libmad libogg libvorbis + gtk2 glib ffmpeg alsa-lib libmad libogg libvorbis glew libpulseaudio udev ]; diff --git a/third_party/nixpkgs/pkgs/games/tcl2048/default.nix b/third_party/nixpkgs/pkgs/games/tcl2048/default.nix index 734e7be366..93286058b4 100644 --- a/third_party/nixpkgs/pkgs/games/tcl2048/default.nix +++ b/third_party/nixpkgs/pkgs/games/tcl2048/default.nix @@ -1,27 +1,20 @@ { lib, stdenv, fetchurl, tcl, tcllib, runtimeShell }: -stdenv.mkDerivation { - name = "tcl2048-0.4.0"; +tcl.mkTclDerivation rec { + pname = "tcl2048"; + version = "0.4.0"; src = fetchurl { - url = "https://raw.githubusercontent.com/dbohdan/2048.tcl/v0.4.0/2048.tcl"; + url = "https://raw.githubusercontent.com/dbohdan/2048.tcl/v${version}/2048.tcl"; sha256 = "53f5503efd7f029b2614b0f9b1e3aac6c0342735a3c9b811d74a5135fee3e89e"; }; - phases = "installPhase"; + buildInputs = [ tcllib ]; + phases = "installPhase fixupPhase"; installPhase = '' mkdir -pv $out/bin - cp $src $out/2048.tcl - cat > $out/bin/2048 << EOF - #!${runtimeShell} - - # wrapper for tcl2048 - export TCLLIBPATH="${tcllib}/lib/tcllib${tcllib.version}" - ${tcl}/bin/tclsh $out/2048.tcl - EOF - - chmod +x $out/bin/2048 + install -m 755 $src $out/bin/2048 ''; meta = { diff --git a/third_party/nixpkgs/pkgs/games/teetertorture/default.nix b/third_party/nixpkgs/pkgs/games/teetertorture/default.nix index 9df0843c5e..6e18dbae07 100644 --- a/third_party/nixpkgs/pkgs/games/teetertorture/default.nix +++ b/third_party/nixpkgs/pkgs/games/teetertorture/default.nix @@ -1,9 +1,10 @@ { lib, stdenv, fetchurl, SDL, SDL_image, SDL_mixer }: -stdenv.mkDerivation { - name = "teeter-torture-20051018"; +stdenv.mkDerivation rec { + pname = "teeter-torture"; + version = "2005-10-18"; src = fetchurl { - url = "ftp://ftp.tuxpaint.org/unix/x/teetertorture/source/teetertorture-2005-10-18.tar.gz"; + url = "ftp://ftp.tuxpaint.org/unix/x/teetertorture/source/teetertorture-${version}.tar.gz"; sha256 = "175gdbkx3m82icyzvwpyzs4v2fd69c695k5n8ca0lnjv81wnw2hr"; }; diff --git a/third_party/nixpkgs/pkgs/games/teeworlds/default.nix b/third_party/nixpkgs/pkgs/games/teeworlds/default.nix index 19f562d54a..b0a49cc77d 100644 --- a/third_party/nixpkgs/pkgs/games/teeworlds/default.nix +++ b/third_party/nixpkgs/pkgs/games/teeworlds/default.nix @@ -1,4 +1,4 @@ -{ fetchFromGitHub, lib, stdenv, cmake, pkg-config, python3, alsaLib +{ fetchFromGitHub, lib, stdenv, cmake, pkg-config, python3, alsa-lib , libX11, libGLU, SDL2, lua5_3, zlib, freetype, wavpack, icoutils , nixosTests }: @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config icoutils ]; buildInputs = [ - python3 alsaLib libX11 libGLU SDL2 lua5_3 zlib freetype wavpack + python3 alsa-lib libX11 libGLU SDL2 lua5_3 zlib freetype wavpack ]; postInstall = '' diff --git a/third_party/nixpkgs/pkgs/games/tennix/default.nix b/third_party/nixpkgs/pkgs/games/tennix/default.nix index c8b2a41592..f81ddb7edf 100644 --- a/third_party/nixpkgs/pkgs/games/tennix/default.nix +++ b/third_party/nixpkgs/pkgs/games/tennix/default.nix @@ -1,9 +1,10 @@ {lib, stdenv, fetchurl, SDL, SDL_mixer, SDL_image, SDL_ttf, SDL_net, python } : stdenv.mkDerivation rec { - name = "tennix-1.1"; + pname = "tennix"; + version = "1.1"; src = fetchurl { - url = "https://icculus.org/tennix/downloads/${name}.tar.gz"; + url = "https://icculus.org/tennix/downloads/tennix-${version}.tar.gz"; sha256 = "0np5kw1y7i0z0dsqx4r2nvmq86qj8hv3mmgavm3hxraqnds5z8cm"; }; diff --git a/third_party/nixpkgs/pkgs/games/tibia/default.nix b/third_party/nixpkgs/pkgs/games/tibia/default.nix index 0892dc2ded..0fee9ce6c6 100644 --- a/third_party/nixpkgs/pkgs/games/tibia/default.nix +++ b/third_party/nixpkgs/pkgs/games/tibia/default.nix @@ -1,10 +1,11 @@ { lib, stdenv, fetchurl, glibc, libX11, runtimeShell, libGLU, libGL }: -stdenv.mkDerivation { - name = "tibia-10.90"; +stdenv.mkDerivation rec { + pname = "tibia"; + version = "10.90"; src = fetchurl { - url = "http://static.tibia.com/download/tibia1090.tgz"; + url = "http://static.tibia.com/download/tibia${lib.replaceStrings ["."] [""] version}.tgz"; sha256 = "11mkh2dynmbpay51yfaxm5dmcys3rnpk579s9ypfkhblsrchbkhx"; }; diff --git a/third_party/nixpkgs/pkgs/games/tintin/default.nix b/third_party/nixpkgs/pkgs/games/tintin/default.nix index 29c41d2d78..73070db244 100644 --- a/third_party/nixpkgs/pkgs/games/tintin/default.nix +++ b/third_party/nixpkgs/pkgs/games/tintin/default.nix @@ -6,10 +6,11 @@ assert tlsSupport -> gnutls != null; stdenv.mkDerivation rec { - name = "tintin-2.02.05"; + pname = "tintin"; + version = "2.02.05"; src = fetchurl { - url = "mirror://sourceforge/tintin/${name}.tar.gz"; + url = "mirror://sourceforge/tintin/tintin-${version}.tar.gz"; sha256 = "sha256-Y6cAUhItJNade8ASOVdF8aBBLf/UVqjoqrhXBNRL1aE="; }; diff --git a/third_party/nixpkgs/pkgs/games/tome4/default.nix b/third_party/nixpkgs/pkgs/games/tome4/default.nix index 70a0321715..ace9b38466 100644 --- a/third_party/nixpkgs/pkgs/games/tome4/default.nix +++ b/third_party/nixpkgs/pkgs/games/tome4/default.nix @@ -1,8 +1,14 @@ { lib, stdenv, fetchurl, makeDesktopItem, makeWrapper, premake4, unzip , openal, libpng, libvorbis, libGLU, SDL2, SDL2_image, SDL2_ttf }: -let +stdenv.mkDerivation rec { pname = "tome4"; + version = "1.6.7"; + + src = fetchurl { + url = "https://te4.org/dl/t-engine/t-engine4-src-${version}.tar.bz2"; + sha256 = "0283hvms5hr29zr0grd6gq059k0hg8hcz3fsmwjmysiih8790i68"; + }; desktop = makeDesktopItem { desktopName = pname; @@ -16,15 +22,6 @@ let genericName = pname; }; -in stdenv.mkDerivation rec { - name = "${pname}-${version}"; - version = "1.6.7"; - - src = fetchurl { - url = "https://te4.org/dl/t-engine/t-engine4-src-${version}.tar.bz2"; - sha256 = "0283hvms5hr29zr0grd6gq059k0hg8hcz3fsmwjmysiih8790i68"; - }; - prePatch = '' # http://forums.te4.org/viewtopic.php?f=42&t=49478&view=next#p234354 sed -i 's|#include ||' src/tgl.h diff --git a/third_party/nixpkgs/pkgs/games/torcs/default.nix b/third_party/nixpkgs/pkgs/games/torcs/default.nix index d1dafb85ce..e3ec82b549 100644 --- a/third_party/nixpkgs/pkgs/games/torcs/default.nix +++ b/third_party/nixpkgs/pkgs/games/torcs/default.nix @@ -3,10 +3,11 @@ libXext, libSM, libICE, libXi, libXt, libXrender, libXxf86vm, libvorbis, libpng, zlib, makeWrapper }: stdenv.mkDerivation rec { - name = "torcs-1.3.7"; + pname = "torcs"; + version = "1.3.7"; src = fetchurl { - url = "mirror://sourceforge/torcs/${name}.tar.bz2"; + url = "mirror://sourceforge/torcs/torcs-${version}.tar.bz2"; sha256 = "0kdq0sc7dsfzlr0ggbxggcbkivc6yp30nqwjwcaxg9295s3b06wa"; }; diff --git a/third_party/nixpkgs/pkgs/games/torus-trooper/default.nix b/third_party/nixpkgs/pkgs/games/torus-trooper/default.nix index 441cffbdf0..645abc76c8 100644 --- a/third_party/nixpkgs/pkgs/games/torus-trooper/default.nix +++ b/third_party/nixpkgs/pkgs/games/torus-trooper/default.nix @@ -16,12 +16,12 @@ debianPatch = patchname: hash: fetchpatch { sha256 = hash; }; -in stdenv.mkDerivation { +in stdenv.mkDerivation rec { pname = "torus-trooper"; version = "0.22"; src = fetchurl { - url = "http://abagames.sakura.ne.jp/windows/tt0_22.zip"; + url = "http://abagames.sakura.ne.jp/windows/tt${lib.replaceStrings ["."] ["_"] version}.zip"; sha256 = "1yhki1fdp3fi4y2iq12vca69f6k38dqjaw9z4lwcxky5kbgb7jvg"; }; diff --git a/third_party/nixpkgs/pkgs/games/tumiki-fighters/default.nix b/third_party/nixpkgs/pkgs/games/tumiki-fighters/default.nix index 2f3cf869f8..b4becea657 100644 --- a/third_party/nixpkgs/pkgs/games/tumiki-fighters/default.nix +++ b/third_party/nixpkgs/pkgs/games/tumiki-fighters/default.nix @@ -16,12 +16,12 @@ debianPatch = patchname: hash: fetchpatch { sha256 = hash; }; -in stdenv.mkDerivation { +in stdenv.mkDerivation rec { pname = "tumiki-fighters"; version = "0.21"; src = fetchurl { - url = "http://abagames.sakura.ne.jp/windows/tf0_21.zip"; + url = "http://abagames.sakura.ne.jp/windows/tf${lib.replaceStrings ["."] ["_"] version}.zip"; sha256 = "0djykfc1r8ysapklm621h89ana1c4qzc1m5nr9bqw4iccnmvwk3p"; }; diff --git a/third_party/nixpkgs/pkgs/games/typespeed/default.nix b/third_party/nixpkgs/pkgs/games/typespeed/default.nix index 396e41c467..1581ab1389 100644 --- a/third_party/nixpkgs/pkgs/games/typespeed/default.nix +++ b/third_party/nixpkgs/pkgs/games/typespeed/default.nix @@ -1,10 +1,11 @@ { lib, stdenv, fetchurl, ncurses }: -stdenv.mkDerivation { - name = "typespeed-0.6.5"; +stdenv.mkDerivation rec { + pname = "typespeed"; + version = "0.6.5"; buildInputs = [ ncurses ]; src = fetchurl { - url = "http://typespeed.sourceforge.net/typespeed-0.6.5.tar.gz"; + url = "http://typespeed.sourceforge.net/typespeed-${version}.tar.gz"; sha256 = "5c860385ceed8a60f13217cc0192c4c2b4705c3e80f9866f7d72ff306eb72961"; }; diff --git a/third_party/nixpkgs/pkgs/games/ufoai/default.nix b/third_party/nixpkgs/pkgs/games/ufoai/default.nix index 7694821d44..89f8f5ec91 100644 --- a/third_party/nixpkgs/pkgs/games/ufoai/default.nix +++ b/third_party/nixpkgs/pkgs/games/ufoai/default.nix @@ -2,14 +2,15 @@ , curl, libjpeg, libpng, gettext, cunit, enableEditor?false }: stdenv.mkDerivation rec { - name = "ufoai-2.4"; + pname = "ufoai"; + version = "2.4"; src = fetchurl { - url = "mirror://sourceforge/ufoai/${name}-source.tar.bz2"; + url = "mirror://sourceforge/ufoai/ufoai-${version}-source.tar.bz2"; sha256 = "0kxrbcjrharcwz319s90m789i4my9285ihp5ax6kfhgif2vn2ji5"; }; srcData = fetchurl { - url = "mirror://sourceforge/ufoai/${name}-data.tar"; + url = "mirror://sourceforge/ufoai/ufoai-${version}-data.tar"; sha256 = "1drhh08cqqkwv1yz3z4ngkplr23pqqrdx6cp8c3isy320gy25cvb"; }; diff --git a/third_party/nixpkgs/pkgs/games/uhexen2/default.nix b/third_party/nixpkgs/pkgs/games/uhexen2/default.nix index dac081cd7b..78c38753f7 100644 --- a/third_party/nixpkgs/pkgs/games/uhexen2/default.nix +++ b/third_party/nixpkgs/pkgs/games/uhexen2/default.nix @@ -1,7 +1,7 @@ { lib, fetchgit, SDL, stdenv, libogg, libvorbis, libmad, xdelta }: stdenv.mkDerivation rec { - name = "uhexen2"; + pname = "uhexen2"; version = "1.5.9"; src = fetchgit { diff --git a/third_party/nixpkgs/pkgs/games/ultimatestunts/default.nix b/third_party/nixpkgs/pkgs/games/ultimatestunts/default.nix index 9f38e43222..2e3d544591 100644 --- a/third_party/nixpkgs/pkgs/games/ultimatestunts/default.nix +++ b/third_party/nixpkgs/pkgs/games/ultimatestunts/default.nix @@ -1,10 +1,11 @@ {lib, stdenv, fetchurl, SDL, libGLU, libGL, SDL_image, freealut, openal, libvorbis, pkg-config}: -stdenv.mkDerivation { - name = "ultimate-stunts-0.7.6.1"; +stdenv.mkDerivation rec { + pname = "ultimate-stunts"; + version = "0.7.6.1"; src = fetchurl { - url = "mirror://sourceforge/ultimatestunts/ultimatestunts-srcdata-0761.tar.gz"; + url = "mirror://sourceforge/ultimatestunts/ultimatestunts-srcdata-${lib.replaceStrings ["."] [""] version}.tar.gz"; sha256 = "0rd565ml6l927gyq158klhni7myw8mgllhv0xl1fg9m8hlzssgrv"; }; diff --git a/third_party/nixpkgs/pkgs/games/unvanquished/default.nix b/third_party/nixpkgs/pkgs/games/unvanquished/default.nix index 35db4625db..f3f8c1413d 100644 --- a/third_party/nixpkgs/pkgs/games/unvanquished/default.nix +++ b/third_party/nixpkgs/pkgs/games/unvanquished/default.nix @@ -1,12 +1,12 @@ -{ lib, stdenv, fetchzip, fetchurl, fetchFromGitHub, buildFHSUserEnv -, runCommandNoCC, makeDesktopItem, copyDesktopItems, gcc, cmake, gmp -, libGL, zlib, ncurses, geoip, lua5, nettle, curl, SDL2, freetype, glew -, openal, libopus, opusfile, libogg, libvorbis, libjpeg, libwebp, libpng +{ lib, stdenv, fetchzip, fetchFromGitHub, buildFHSUserEnv, makeDesktopItem +, copyDesktopItems, gcc, cmake, gmp , libGL, zlib, ncurses, geoip, lua5 +, nettle, curl, SDL2, freetype, glew , openal, libopus, opusfile, libogg +, libvorbis, libjpeg, libwebp, libpng , cacert, aria2 # to download assets }: let - version = "0.52.0"; + version = "0.52.1"; binary-deps-version = "5"; src = fetchFromGitHub { @@ -14,7 +14,7 @@ let repo = "Unvanquished"; rev = "v${version}"; fetchSubmodules = true; - sha256 = "1acda1559q6zwmhg3x00nai88hy83i5hcfli2bqfab7slr95lm27"; + sha256 = "1fiqn9f6nsh4cfjy7gfsv950hphwi9ca0ddgsjvn77g7yc0arp6c"; }; unvanquished-binary-deps = stdenv.mkDerivation rec { @@ -77,15 +77,14 @@ let chmod +x $out/bin/${wrappername} ''; - unvanquished-assets = stdenv.mkDerivation { pname = "unvanquished-assets"; inherit version src; - outputHash = "sha256:1fy85cjnjk9rrqkhgx5701inff2yv14hnxglzx3209c553gn31n7"; + outputHash = "sha256:084jdisb48xyk9agjifn0nlnsdnjgg32si8zd1khsywd0kffplzx"; outputHashMode = "recursive"; nativeBuildInputs = [ aria2 cacert ]; - buildCommand = "bash $src/download-paks $out"; + buildCommand = "bash $src/download-paks --cache=$(pwd) --version=${version} $out"; }; # this really is the daemon game engine, the game itself is in the assets @@ -127,6 +126,7 @@ in stdenv.mkDerivation rec { "-DBUILD_SGAME=NO" "-DUSE_HARDENING=TRUE" "-DUSE_LTO=TRUE" + "-DOpenGL_GL_PREFERENCE=LEGACY" # https://github.com/DaemonEngine/Daemon/issues/474 ]; desktopItems = [ @@ -185,7 +185,8 @@ in stdenv.mkDerivation rec { # don't replace the following lib.licenses.zlib with just "zlib", # or you would end up with the package instead license = with lib.licenses; [ - mit gpl3Only lib.licenses.zlib cc-by-sa-25 + mit gpl3Plus lib.licenses.zlib bsd3 # engine + cc-by-sa-25 cc-by-sa-30 cc-by-30 cc-by-sa-40 cc0 # assets ]; }; } diff --git a/third_party/nixpkgs/pkgs/games/vectoroids/default.nix b/third_party/nixpkgs/pkgs/games/vectoroids/default.nix index e0b7e13c91..765f214658 100644 --- a/third_party/nixpkgs/pkgs/games/vectoroids/default.nix +++ b/third_party/nixpkgs/pkgs/games/vectoroids/default.nix @@ -1,9 +1,10 @@ {lib, stdenv, fetchurl, SDL, SDL_image, SDL_mixer}: -stdenv.mkDerivation { - name = "vectoroids-1.1.0"; +stdenv.mkDerivation rec { + pname = "vectoroids"; + version = "1.1.0"; src = fetchurl { - url = "ftp://ftp.tuxpaint.org/unix/x/vectoroids/src/vectoroids-1.1.0.tar.gz"; + url = "ftp://ftp.tuxpaint.org/unix/x/vectoroids/src/vectoroids-${version}.tar.gz"; sha256 = "0bkvd4a1v496w0vlvqyi1a6p25ssgpkchxxxi8899sb72wlds54d"; }; diff --git a/third_party/nixpkgs/pkgs/games/vessel/default.nix b/third_party/nixpkgs/pkgs/games/vessel/default.nix index a60ec15744..7c535cb323 100644 --- a/third_party/nixpkgs/pkgs/games/vessel/default.nix +++ b/third_party/nixpkgs/pkgs/games/vessel/default.nix @@ -1,19 +1,20 @@ -{ lib, stdenv, requireFile, SDL, libpulseaudio, alsaLib, runtimeShell }: +{ lib, stdenv, requireFile, SDL, libpulseaudio, alsa-lib, runtimeShell }: stdenv.mkDerivation rec { - name = "vessel-12082012"; + pname = "vessel"; + version = "12082012"; goBuyItNow = '' We cannot download the full version automatically, as you require a license. Once you bought a license, you need to add your downloaded version to the nix store. - You can do this by using "nix-prefetch-url file://\$PWD/${name}-bin" in the + You can do this by using "nix-prefetch-url file://\$PWD/vessel-${version}-bin" in the directory where you saved it. ''; src = if (stdenv.isi686) then requireFile { message = goBuyItNow; - name = "${name}-bin"; + name = "vessel-${version}-bin"; sha256 = "1vpwcrjiln2mx43h7ib3jnccyr3chk7a5x2bw9kb4lw8ycygvg96"; } else throw "unsupported platform ${stdenv.hostPlatform.system} only i686-linux supported for now."; @@ -21,7 +22,7 @@ stdenv.mkDerivation rec { ld_preload = ./isatty.c; libPath = lib.makeLibraryPath [ stdenv.cc.cc stdenv.cc.libc ] - + ":" + lib.makeLibraryPath [ SDL libpulseaudio alsaLib ] ; + + ":" + lib.makeLibraryPath [ SDL libpulseaudio alsa-lib ] ; installPhase = '' mkdir -p $out/libexec/strangeloop/vessel/ diff --git a/third_party/nixpkgs/pkgs/games/widelands/default.nix b/third_party/nixpkgs/pkgs/games/widelands/default.nix index 8b96dcc04e..f094c7cd59 100644 --- a/third_party/nixpkgs/pkgs/games/widelands/default.nix +++ b/third_party/nixpkgs/pkgs/games/widelands/default.nix @@ -1,52 +1,90 @@ -{ lib, stdenv, fetchurl, cmake, python, gettext -, boost, libpng, zlib, glew, lua, doxygen, icu -, SDL2, SDL2_image, SDL2_mixer, SDL2_net, SDL2_ttf +{ lib +, stdenv +, fetchFromGitHub +, SDL2 +, SDL2_image +, SDL2_mixer +, SDL2_net +, SDL2_ttf +, boost +, cmake +, curl +, doxygen +, gettext +, glew +, graphviz +, icu +, installShellFiles +, libpng +, lua +, python3 +, zlib }: stdenv.mkDerivation rec { pname = "widelands"; - version = "21"; + version = "1.0"; + + src = fetchFromGitHub { + owner = "widelands"; + repo = "widelands"; + rev = "v${version}"; + sha256 = "sha256-gNumYoeKePaxiAzrqEPKibMxFwv9vyBrCSoua+MKhcM="; + }; + + patches = [ ./bincmake.patch ]; + + postPatch = '' + substituteInPlace xdg/org.widelands.Widelands.desktop \ + --replace 'Exec=widelands' "Exec=$out/bin/widelands" + ''; + + cmakeFlags = [ + "-Wno-dev" # dev warnings are only needed for upstream development + "-DWL_INSTALL_BASEDIR=${placeholder "out"}" + "-DWL_INSTALL_DATADIR=${placeholder "out"}/share/widelands" + "-DWL_INSTALL_BINARY=${placeholder "out"}/bin" + ]; + + nativeBuildInputs = [ cmake doxygen gettext graphviz installShellFiles ]; + + buildInputs = [ + SDL2 + SDL2_image + SDL2_mixer + SDL2_net + SDL2_ttf + boost + curl + glew + icu + libpng + lua + python3 + zlib + ]; + + postInstall = '' + install -Dm444 -t $out/share/applications ../xdg/org.widelands.Widelands.desktop + + for s in 16 32 48 64 128; do + install -Dm444 ../data/images/logos/wl-ico-''${s}.png $out/share/icons/hicolor/''${s}x''${s}/org.widelands.Widelands.png + done + + installManPage ../xdg/widelands.6 + ''; meta = with lib; { description = "RTS with multiple-goods economy"; - homepage = "http://widelands.org/"; + homepage = "https://widelands.org/"; longDescription = '' Widelands is a real time strategy game based on "The Settlers" and "The Settlers II". It has a single player campaign mode, as well as a networked multiplayer mode. ''; - license = licenses.gpl2Plus; - platforms = platforms.linux; - maintainers = with maintainers; [ raskin jcumming ]; - hydraPlatforms = []; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ raskin jcumming ]; + platforms = platforms.linux; + hydraPlatforms = [ ]; }; - - patches = [ - ./bincmake.patch - ]; - - src = fetchurl { - url = "https://launchpad.net/widelands/build${version}/build${version}/+download/widelands-build${version}-source.tar.gz"; - sha256 = "sha256-YB4OTG+Rs/sOzizRuD7PsCNEobkZT7tw7z9w4GmU41c="; - }; - - preConfigure = '' - cmakeFlags=" - -DWL_INSTALL_BASEDIR=$out - -DWL_INSTALL_DATADIR=$out/share/widelands - -DWL_INSTALL_BINARY=$out/bin - " - ''; - - nativeBuildInputs = [ cmake python gettext ]; - - buildInputs = [ - boost libpng zlib glew lua doxygen icu - SDL2 SDL2_image SDL2_mixer SDL2_net SDL2_ttf - ]; - - postInstall = '' - mkdir -p "$out/share/applications/" - cp -v "../xdg/org.widelands.Widelands.desktop" "$out/share/applications/" - ''; } diff --git a/third_party/nixpkgs/pkgs/games/xbomb/default.nix b/third_party/nixpkgs/pkgs/games/xbomb/default.nix index 2d9f57d1e7..093f822a7e 100644 --- a/third_party/nixpkgs/pkgs/games/xbomb/default.nix +++ b/third_party/nixpkgs/pkgs/games/xbomb/default.nix @@ -1,9 +1,10 @@ { lib, stdenv, fetchurl, libX11, libXaw }: stdenv.mkDerivation rec { - name = "xbomb-2.2b"; + pname = "xbomb"; + version = "2.2b"; src = fetchurl { - url = "https://www.gedanken.org.uk/software/xbomb/download/${name}.tgz"; + url = "https://www.gedanken.org.uk/software/xbomb/download/xbomb-${version}.tgz"; sha256 = "0692gjw28qvh8wj9l58scjw6kxj7jdyb3yzgcgs9wcznq11q839m"; }; diff --git a/third_party/nixpkgs/pkgs/games/xonotic/default.nix b/third_party/nixpkgs/pkgs/games/xonotic/default.nix index fb6cb93f7f..0a5a58885d 100644 --- a/third_party/nixpkgs/pkgs/games/xonotic/default.nix +++ b/third_party/nixpkgs/pkgs/games/xonotic/default.nix @@ -3,7 +3,7 @@ , # required for both unzip, libjpeg, zlib, libvorbis, curl , # glx - libX11, libGLU, libGL, libXpm, libXext, libXxf86vm, alsaLib + libX11, libGLU, libGL, libXpm, libXext, libXxf86vm, alsa-lib , # sdl SDL2 @@ -58,13 +58,13 @@ let inherit version; src = fetchurl { - url = "https://dl.xonotic.org/${name}-source.zip"; + url = "https://dl.xonotic.org/${pname}-${version}-source.zip"; sha256 = "0axxw04fyz6jlfqd0kp7hdrqa0li31sx1pbipf2j5qp9wvqicsay"; }; nativeBuildInputs = [ unzip ]; buildInputs = [ libjpeg zlib libvorbis curl ] - ++ lib.optional withGLX [ libX11.dev libGLU.dev libGL.dev libXpm.dev libXext.dev libXxf86vm.dev alsaLib.dev ] + ++ lib.optional withGLX [ libX11.dev libGLU.dev libGL.dev libXpm.dev libXext.dev libXxf86vm.dev alsa-lib.dev ] ++ lib.optional withSDL [ SDL2.dev ]; sourceRoot = "Xonotic/source/darkplaces"; @@ -119,8 +119,8 @@ let in rec { xonotic-data = fetchzip { - name = "xonotic-data-${version}"; - url = "https://dl.xonotic.org/${name}.zip"; + name = "xonotic-data"; + url = "https://dl.xonotic.org/xonotic-data-${version}.zip"; sha256 = "1ygkh0v68y4sd1w5vpk8dgb65h5jm599hwszdfgjp3ax4d3ml81x"; extraPostFetch = '' cd $out diff --git a/third_party/nixpkgs/pkgs/games/xsnow/default.nix b/third_party/nixpkgs/pkgs/games/xsnow/default.nix index de07821c36..ba0fcf784f 100644 --- a/third_party/nixpkgs/pkgs/games/xsnow/default.nix +++ b/third_party/nixpkgs/pkgs/games/xsnow/default.nix @@ -1,26 +1,26 @@ -{ lib, stdenv, fetchurl, libXt, libXpm, libXext, imake, gccmakedep }: +{ lib, stdenv, fetchurl, pkg-config, libxml2, gtk3-x11, libXt, libXpm }: stdenv.mkDerivation rec { - - version = "1.42"; pname = "xsnow"; + version = "3.3.0"; src = fetchurl { - url = "https://janswaal.home.xs4all.nl/Xsnow/${pname}-${version}.tar.gz"; - sha256 = "06jnbp88wc9i9dbmy7kggplw4hzlx2bhghxijmlhkjlizgqwimyh"; + url = "https://ratrabbit.nl/downloads/xsnow/xsnow-${version}.tar.gz"; + sha256 = "1xnpqbamhglv7xsxzlrlpvsz6bbzlrvdpn5x2n9baww9kcrkbwjg"; }; - nativeBuildInputs = [ imake gccmakedep ]; - buildInputs = [ - libXt libXpm libXext - ]; + nativeBuildInputs = [ pkg-config ]; + buildInputs = [ gtk3-x11 libxml2 libXt libXpm ]; - makeFlags = [ "BINDIR=$(out)/bin" "MANPATH=$(out)/share/man" ]; + makeFlags = [ "gamesdir=$(out)/bin" ]; - meta = { + enableParallelBuilding = true; + + meta = with lib; { description = "An X-windows application that will let it snow on the root, in between and on windows"; - homepage = "http://janswaal.home.xs4all.nl/Xsnow/"; - license = lib.licenses.unfree; - maintainers = [ lib.maintainers.robberer ]; + homepage = "https://ratrabbit.nl/ratrabbit/xsnow/"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ robberer ]; + platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/games/zandronum/fmod.nix b/third_party/nixpkgs/pkgs/games/zandronum/fmod.nix index 4b09cb170c..59075d69c7 100644 --- a/third_party/nixpkgs/pkgs/games/zandronum/fmod.nix +++ b/third_party/nixpkgs/pkgs/games/zandronum/fmod.nix @@ -1,8 +1,8 @@ -{ stdenv, lib, fetchurl, alsaLib, libpulseaudio, undmg }: +{ stdenv, lib, fetchurl, alsa-lib, libpulseaudio, undmg }: let bits = lib.optionalString (stdenv.hostPlatform.system == "x86_64-linux") "64"; - libPath = lib.makeLibraryPath [ stdenv.cc.cc alsaLib libpulseaudio ]; + libPath = lib.makeLibraryPath [ stdenv.cc.cc alsa-lib libpulseaudio ]; in stdenv.mkDerivation rec { diff --git a/third_party/nixpkgs/pkgs/games/zandronum/sqlite.nix b/third_party/nixpkgs/pkgs/games/zandronum/sqlite.nix index 48dd2be997..c9baefcf0a 100644 --- a/third_party/nixpkgs/pkgs/games/zandronum/sqlite.nix +++ b/third_party/nixpkgs/pkgs/games/zandronum/sqlite.nix @@ -1,7 +1,8 @@ { lib, stdenv, fetchurl }: stdenv.mkDerivation { - name = "sqlite-zandronum-3.0"; + pname = "sqlite-zandronum"; + version = "3.0"; src = fetchurl { url = "https://www.sqlite.org/2017/sqlite-autoconf-3180000.tar.gz"; diff --git a/third_party/nixpkgs/pkgs/games/zdoom/bcc-git.nix b/third_party/nixpkgs/pkgs/games/zdoom/bcc-git.nix index 2e9f1a9c2b..aa3fdeca18 100644 --- a/third_party/nixpkgs/pkgs/games/zdoom/bcc-git.nix +++ b/third_party/nixpkgs/pkgs/games/zdoom/bcc-git.nix @@ -1,7 +1,8 @@ { lib, stdenv, fetchFromGitHub }: stdenv.mkDerivation { - name = "doom-bcc-git-0.8.0.2018.01.04"; + pname = "doom-bcc"; + version = "unstable-2018-01-04"; src = fetchFromGitHub { owner = "wormt"; diff --git a/third_party/nixpkgs/pkgs/games/zod/default.nix b/third_party/nixpkgs/pkgs/games/zod/default.nix index f7d7a5612d..6bf24ed6cb 100644 --- a/third_party/nixpkgs/pkgs/games/zod/default.nix +++ b/third_party/nixpkgs/pkgs/games/zod/default.nix @@ -16,8 +16,8 @@ , substituteAll }: let + name = "zod-engine"; version = "2011-09-06"; - name = "zod-engine-${version}"; src = fetchzip { url = "mirror://sourceforge/zod/linux_releases/zod_linux-${version}.tar.gz"; sha256 = "017v96aflrv07g8j8zk9mq8f8rqxl5228rjff5blq8dxpsv1sx7h"; @@ -37,7 +37,7 @@ let hardeningDisable = [ "format" ]; NIX_LDFLAGS = "-L${libmysqlclient}/lib/mysql"; zod_engine = stdenv.mkDerivation { - inherit name version src nativeBuildInputs buildInputs hardeningDisable NIX_LDFLAGS; + inherit version src nativeBuildInputs buildInputs hardeningDisable NIX_LDFLAGS; pname = "${name}-engine"; enableParallelBuilding = true; preBuild = "cd zod_src"; @@ -48,7 +48,7 @@ let ''; }; zod_map_editor = stdenv.mkDerivation { - inherit name version src nativeBuildInputs buildInputs hardeningDisable NIX_LDFLAGS; + inherit version src nativeBuildInputs buildInputs hardeningDisable NIX_LDFLAGS; pname = "${name}-map_editor"; enableParallelBuilding = true; preBuild = "cd zod_src"; @@ -60,7 +60,7 @@ let ''; }; zod_launcher = stdenv.mkDerivation { - inherit name version src nativeBuildInputs buildInputs zod_engine zod_map_editor; + inherit version src nativeBuildInputs buildInputs zod_engine zod_map_editor; pname = "${name}-launcher"; # This is necessary because the zod_launcher has terrible fixed-width window # the Idea is to apply the scalingFactor to all positions and sizes and I tested 1,2,3 and 4 diff --git a/third_party/nixpkgs/pkgs/games/zoom/default.nix b/third_party/nixpkgs/pkgs/games/zoom/default.nix index 086d860872..02cfc28ebe 100644 --- a/third_party/nixpkgs/pkgs/games/zoom/default.nix +++ b/third_party/nixpkgs/pkgs/games/zoom/default.nix @@ -3,10 +3,11 @@ # !!! assert freetype == xorg.freetype stdenv.mkDerivation rec { - name = "zoom-1.1.5"; + pname = "zoom"; + version = "1.1.5"; src = fetchurl { - url = "https://www.logicalshift.co.uk/unix/zoom/${name}.tar.gz"; + url = "https://www.logicalshift.co.uk/unix/zoom/zoom-${version}.tar.gz"; sha256 = "1g6van7f7sg3zfcz80mncnnbccyg2hnm0hq4x558vpsm0lf7z5pj"; }; diff --git a/third_party/nixpkgs/pkgs/misc/apulse/default.nix b/third_party/nixpkgs/pkgs/misc/apulse/default.nix index 085ad7902f..95beb8bcdf 100644 --- a/third_party/nixpkgs/pkgs/misc/apulse/default.nix +++ b/third_party/nixpkgs/pkgs/misc/apulse/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, alsaLib, cmake, pkg-config, glib +{ lib, stdenv, fetchFromGitHub, alsa-lib, cmake, pkg-config, glib , tracingSupport ? true, logToStderr ? true }: let oz = x: if x then "1" else "0"; in @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; - buildInputs = [ alsaLib glib ]; + buildInputs = [ alsa-lib glib ]; cmakeFlags = [ "-DWITH_TRACE=${oz tracingSupport}" diff --git a/third_party/nixpkgs/pkgs/misc/arm-trusted-firmware/default.nix b/third_party/nixpkgs/pkgs/misc/arm-trusted-firmware/default.nix index f3e2f0dca2..c3be2213c3 100644 --- a/third_party/nixpkgs/pkgs/misc/arm-trusted-firmware/default.nix +++ b/third_party/nixpkgs/pkgs/misc/arm-trusted-firmware/default.nix @@ -17,7 +17,7 @@ let owner = "ARM-software"; repo = "arm-trusted-firmware"; rev = "v${version}"; - sha256 = "sha256-qfzZ3aVYYn0ZcZgKcLdB13B+eweDebLSBA3HTqdPdv0="; + sha256 = "0w3blkqgmyb5bahlp04hmh8abrflbzy0qg83kmj1x9nv4mw66f3b"; }; depsBuildBuild = [ buildPackages.stdenv.cc ]; diff --git a/third_party/nixpkgs/pkgs/misc/cups/drivers/kyocera-ecosys-m552x-p502x/default.nix b/third_party/nixpkgs/pkgs/misc/cups/drivers/kyocera-ecosys-m552x-p502x/default.nix new file mode 100644 index 0000000000..66e3d036bc --- /dev/null +++ b/third_party/nixpkgs/pkgs/misc/cups/drivers/kyocera-ecosys-m552x-p502x/default.nix @@ -0,0 +1,29 @@ +{ stdenv +, lib +, fetchzip + # can either be "EU" or "Global"; it's unclear what the difference is +, region ? "Global" +}: + +stdenv.mkDerivation rec { + pname = "cups-kyocera-ecosys-m552x-p502x"; + version = "8.1602"; + + src = fetchzip { + url = "https://www.kyoceradocumentsolutions.de/content/download-center/de/drivers/all/Linux_8_1602_ECOSYS_M5521_5526_P5021_5026_zip.download.zip"; + sha256 = "sha256-XDH5deZmWNghfoO7JaYYvnVq++mbQ8RwLY57L2CKYaY="; + }; + + installPhase = '' + mkdir -p $out/share/cups/model/Kyocera + cp ${region}/English/*.PPD $out/share/cups/model/Kyocera/ + ''; + + meta = with lib; { + description = "PPD files for Kyocera ECOSYS M5521cdn/M5521cdw/M5526cdn/M5526cdw/P5021cdn/P5021cdw/P5026cdn/P5026cdw"; + homepage = "https://www.kyoceradocumentsolutions.com"; + license = licenses.unfree; + maintainers = [ maintainers.mbrgm ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/misc/cups/drivers/mfc9140cdncupswrapper/default.nix b/third_party/nixpkgs/pkgs/misc/cups/drivers/mfc9140cdncupswrapper/default.nix new file mode 100644 index 0000000000..0542b2ab30 --- /dev/null +++ b/third_party/nixpkgs/pkgs/misc/cups/drivers/mfc9140cdncupswrapper/default.nix @@ -0,0 +1,68 @@ +{ lib +, stdenv +, fetchurl +, dpkg +, makeWrapper +, coreutils +, gnugrep +, gnused +, mfc9140cdnlpr +, pkgsi686Linux +, psutils +}: + +stdenv.mkDerivation rec { + pname = "mfc9140cdncupswrapper"; + version = "1.1.4-0"; + + src = fetchurl { + url = "https://download.brother.com/welcome/dlf100407/${pname}-${version}.i386.deb"; + sha256 = "18aramgqgra1shdhsa75i0090hk9i267gvabildwsk52kq2b96c6"; + }; + + unpackPhase = '' + dpkg-deb -x $src $out + ''; + + nativeBuildInputs = [ + dpkg + makeWrapper + ]; + + dontBuild = true; + + installPhase = '' + lpr=${mfc9140cdnlpr}/opt/brother/Printers/mfc9140cdn + dir=$out/opt/brother/Printers/mfc9140cdn + + interpreter=${pkgsi686Linux.glibc.out}/lib/ld-linux.so.2 + patchelf --set-interpreter "$interpreter" "$dir/cupswrapper/brcupsconfpt1" + + substituteInPlace $dir/cupswrapper/cupswrappermfc9140cdn \ + --replace "mkdir -p /usr" ": # mkdir -p /usr" \ + --replace '/opt/brother/''${device_model}/''${printer_model}/lpd/filter''${printer_model}' "$lpr/lpd/filtermfc9140cdn" \ + --replace '/usr/share/ppd/Brother/brother_''${printer_model}_printer_en.ppd' "$dir/cupswrapper/brother_mfc9140cdn_printer_en.ppd" \ + --replace '/usr/share/cups/model/Brother/brother_''${printer_model}_printer_en.ppd' "$dir/cupswrapper/brother_mfc9140cdn_printer_en.ppd" \ + --replace '/opt/brother/Printers/''${printer_model}/' "$lpr/" \ + --replace 'nup="psnup' "nup=\"${psutils}/bin/psnup" \ + --replace '/usr/bin/psnup' "${psutils}/bin/psnup" + + mkdir -p $out/lib/cups/filter + mkdir -p $out/share/cups/model + + ln $dir/cupswrapper/cupswrappermfc9140cdn $out/lib/cups/filter + ln $dir/cupswrapper/brother_mfc9140cdn_printer_en.ppd $out/share/cups/model + + sed -n '/!ENDOFWFILTER!/,/!ENDOFWFILTER!/p' "$dir/cupswrapper/cupswrappermfc9140cdn" | sed '1 br; b; :r s/.*/printer_model=mfc9140cdn; cat < $out/lib/cups/filter/brother_lpdwrapper_mfc9140cdn + sed -i "/#! \/bin\/sh/a PATH=${lib.makeBinPath [ coreutils gnused gnugrep ]}:\$PATH" $out/lib/cups/filter/brother_lpdwrapper_mfc9140cdn + chmod +x $out/lib/cups/filter/brother_lpdwrapper_mfc9140cdn + ''; + + meta = with lib; { + description = "Brother MFC-9140CDN CUPS wrapper driver"; + homepage = "http://www.brother.com/"; + license = licenses.gpl2Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ hexa ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/misc/cups/drivers/mfc9140cdnlpr/default.nix b/third_party/nixpkgs/pkgs/misc/cups/drivers/mfc9140cdnlpr/default.nix new file mode 100644 index 0000000000..4128123d64 --- /dev/null +++ b/third_party/nixpkgs/pkgs/misc/cups/drivers/mfc9140cdnlpr/default.nix @@ -0,0 +1,73 @@ +{ stdenv +, lib +, fetchurl +, dpkg +, makeWrapper +, coreutils +, file +, gawk +, ghostscript +, gnused +, pkgsi686Linux +}: + +stdenv.mkDerivation rec { + pname = "mfc9140cdnlpr"; + version = "1.1.2-1"; + + src = fetchurl { + url = "https://download.brother.com/welcome/dlf100405/${pname}-${version}.i386.deb"; + sha256 = "1wqx8njrv078fc3vlq90qyrfg3cw9kr9m6f3qvfnkhq1f95fbslh"; + }; + + unpackPhase = '' + dpkg-deb -x $src $out + ''; + + nativeBuildInputs = [ + dpkg + makeWrapper + ]; + + dontBuild = true; + + installPhase = '' + dir=$out/opt/brother/Printers/mfc9140cdn + + patchelf --set-interpreter ${pkgsi686Linux.glibc.out}/lib/ld-linux.so.2 $dir/lpd/brmfc9140cdnfilter + + wrapProgram $dir/inf/setupPrintcapij \ + --prefix PATH : ${lib.makeBinPath [ + coreutils + ]} + + substituteInPlace $dir/lpd/filtermfc9140cdn \ + --replace "BR_CFG_PATH=" "BR_CFG_PATH=\"$dir/\" #" \ + --replace "BR_LPD_PATH=" "BR_LPD_PATH=\"$dir/\" #" + + wrapProgram $dir/lpd/filtermfc9140cdn \ + --prefix PATH : ${lib.makeBinPath [ + coreutils + file + ghostscript + gnused + ]} + + substituteInPlace $dir/lpd/psconvertij2 \ + --replace '`which gs`' "${ghostscript}/bin/gs" + + wrapProgram $dir/lpd/psconvertij2 \ + --prefix PATH : ${lib.makeBinPath [ + gnused + gawk + ]} + ''; + + meta = with lib; { + description = "Brother MFC-9140CDN LPR printer driver"; + homepage = "http://www.brother.com/"; + license = licenses.unfree; + maintainers = with maintainers; [ hexa ]; + platforms = [ "i686-linux" "x86_64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/misc/drivers/epson-escpr2/default.nix b/third_party/nixpkgs/pkgs/misc/drivers/epson-escpr2/default.nix index 04cf6c3d96..130be517bb 100644 --- a/third_party/nixpkgs/pkgs/misc/drivers/epson-escpr2/default.nix +++ b/third_party/nixpkgs/pkgs/misc/drivers/epson-escpr2/default.nix @@ -1,8 +1,8 @@ -{ lib, stdenv, fetchurl, cups, busybox }: +{ lib, stdenv, fetchurl, cups }: stdenv.mkDerivation rec { pname = "epson-inkjet-printer-escpr2"; - version = "1.1.25"; + version = "1.1.34"; src = fetchurl { # To find new versions, visit @@ -11,22 +11,15 @@ stdenv.mkDerivation rec { # version. # NOTE: Don't forget to update the webarchive link too! urls = [ - "https://download3.ebz.epson.net/dsc/f/03/00/12/46/43/e233a3fefeb49723ba4b0a2f357527e3b45bf53a/epson-inkjet-printer-escpr2-1.1.25-1lsb3.2.src.rpm" - "https://web.archive.org/web/20210212220538if_/https://download3.ebz.epson.net/dsc/f/03/00/12/46/43/e233a3fefeb49723ba4b0a2f357527e3b45bf53a/epson-inkjet-printer-escpr2-1.1.25-1lsb3.2.src.rpm" + "https://download3.ebz.epson.net/dsc/f/03/00/12/85/48/fd5de1ecd7270b0398399355e265c99dfd1dbafb/epson-inkjet-printer-escpr2-1.1.34.tar.gz" + "https://web.archive.org/web/20210627160654/https://download3.ebz.epson.net/dsc/f/03/00/12/85/48/fd5de1ecd7270b0398399355e265c99dfd1dbafb/epson-inkjet-printer-escpr2-1.1.34.tar.gz" ]; - sha256 = "sha256-8hgafO/1qOTVdfAdx7FpOOSLqfTl0sBFunuN/2q7KHw="; + sha256 = "sha256-sHBGWbkZ+zolHehyXQR8U2AyKSrgDSPmrkrcfcx/bAs="; }; patches = [ ./cups-filter-ppd-dirs.patch ]; - buildInputs = [ cups busybox ]; - - unpackPhase = '' - rpm2cpio $src | cpio -idmv - - tar xvf ${pname}-${version}-1lsb3.2.tar.gz - cd ${pname}-${version} - ''; + buildInputs = [ cups ]; meta = with lib; { homepage = "http://download.ebz.epson.net/dsc/search/01/search/"; diff --git a/third_party/nixpkgs/pkgs/misc/drivers/hplip/3.18.5.nix b/third_party/nixpkgs/pkgs/misc/drivers/hplip/3.18.5.nix deleted file mode 100644 index 3c2f8fa2a0..0000000000 --- a/third_party/nixpkgs/pkgs/misc/drivers/hplip/3.18.5.nix +++ /dev/null @@ -1,229 +0,0 @@ -{ lib, stdenv, fetchurl, substituteAll -, pkg-config -, cups, zlib, libjpeg, libusb1, python2Packages, sane-backends -, dbus, file, ghostscript, usbutils -, net-snmp, openssl, perl, nettools -, bash, coreutils, util-linux -, withQt5 ? true -, withPlugin ? false -, withStaticPPDInstall ? false -}: - -let - - name = "hplip-${version}"; - version = "3.18.5"; - - src = fetchurl { - url = "mirror://sourceforge/hplip/${name}.tar.gz"; - sha256 = "0xb7ga2wgbwjxsss67mjn2y6fmqsfwzmv11ivvfzhnl36lh22hkb"; - }; - - plugin = fetchurl { - url = "https://www.openprinting.org/download/printdriver/auxfiles/HP/plugins/${name}-plugin.run"; - sha256 = "1jf74jya071zqvwhy9n0c3007pzgcxydkw7qdh4sx70brly81i7p"; - }; - - hplipState = substituteAll { - inherit version; - src = ./hplip.state; - }; - - hplipPlatforms = { - i686-linux = "x86_32"; - x86_64-linux = "x86_64"; - armv6l-linux = "arm32"; - armv7l-linux = "arm32"; - aarch64-linux = "arm64"; - }; - - hplipArch = hplipPlatforms.${stdenv.hostPlatform.system} - or (throw "HPLIP not supported on ${stdenv.hostPlatform.system}"); - - pluginArches = [ "x86_32" "x86_64" "arm32" "arm64" ]; - -in - -assert withPlugin -> builtins.elem hplipArch pluginArches - || throw "HPLIP plugin not supported on ${stdenv.hostPlatform.system}"; - -python2Packages.buildPythonApplication { - inherit name src; - format = "other"; - - buildInputs = [ - libjpeg - cups - libusb1 - sane-backends - dbus - file - ghostscript - net-snmp - openssl - perl - zlib - ]; - - nativeBuildInputs = [ - pkg-config - ]; - - pythonPath = with python2Packages; [ - dbus - pillow - pygobject2 - reportlab - usbutils - sip_4 - ] ++ lib.optionals withQt5 [ - pyqt5 - ]; - - makeWrapperArgs = [ "--prefix" "PATH" ":" "${nettools}/bin" ]; - - prePatch = '' - # HPLIP hardcodes absolute paths everywhere. Nuke from orbit. - find . -type f -exec sed -i \ - -e s,/etc/hp,$out/etc/hp,g \ - -e s,/etc/sane.d,$out/etc/sane.d,g \ - -e s,/usr/include/libusb-1.0,${libusb1.dev}/include/libusb-1.0,g \ - -e s,/usr/share/hal/fdi/preprobe/10osvendor,$out/share/hal/fdi/preprobe/10osvendor,g \ - -e s,/usr/lib/systemd/system,$out/lib/systemd/system,g \ - -e s,/var/lib/hp,$out/var/lib/hp,g \ - -e s,/usr/bin/perl,${perl}/bin/perl,g \ - -e s,/usr/bin/file,${file}/bin/file,g \ - -e s,/usr/bin/gs,${ghostscript}/bin/gs,g \ - -e s,/usr/share/cups/fonts,${ghostscript}/share/ghostscript/fonts,g \ - -e "s,ExecStart=/usr/bin/python /usr/bin/hp-config_usb_printer,ExecStart=$out/bin/hp-config_usb_printer,g" \ - {} + - ''; - - preConfigure = '' - export configureFlags="$configureFlags - --with-hpppddir=$out/share/cups/model/HP - --with-cupsfilterdir=$out/lib/cups/filter - --with-cupsbackenddir=$out/lib/cups/backend - --with-icondir=$out/share/applications - --with-systraydir=$out/xdg/autostart - --with-mimedir=$out/etc/cups - --enable-policykit - ${lib.optionalString withStaticPPDInstall "--enable-cups-ppd-install"} - --disable-qt4 - ${lib.optionalString withQt5 "--enable-qt5"} - " - - export makeFlags=" - halpredir=$out/share/hal/fdi/preprobe/10osvendor - rulesdir=$out/etc/udev/rules.d - policykit_dir=$out/share/polkit-1/actions - policykit_dbus_etcdir=$out/etc/dbus-1/system.d - policykit_dbus_sharedir=$out/share/dbus-1/system-services - hplip_confdir=$out/etc/hp - hplip_statedir=$out/var/lib/hp - " - - # Prevent 'ppdc: Unable to find include file ""' which prevent - # generation of '*.ppd' files. - # This seems to be a 'ppdc' issue when the tool is run in a hermetic sandbox. - # Could not find how to fix the problem in 'ppdc' so this is a workaround. - export CUPS_DATADIR="${cups}/share/cups" - ''; - - enableParallelBuilding = true; - - # - # Running `hp-diagnose_plugin -g` can be used to diagnose - # issues with plugins. - # - postInstall = lib.optionalString withPlugin '' - sh ${plugin} --noexec --keep - cd plugin_tmp - - cp plugin.spec $out/share/hplip/ - - mkdir -p $out/share/hplip/data/firmware - cp *.fw.gz $out/share/hplip/data/firmware - - mkdir -p $out/share/hplip/data/plugins - cp license.txt $out/share/hplip/data/plugins - - mkdir -p $out/share/hplip/prnt/plugins - for plugin in lj hbpl1; do - cp $plugin-${hplipArch}.so $out/share/hplip/prnt/plugins - chmod 0755 $out/share/hplip/prnt/plugins/$plugin-${hplipArch}.so - ln -s $out/share/hplip/prnt/plugins/$plugin-${hplipArch}.so \ - $out/share/hplip/prnt/plugins/$plugin.so - done - - mkdir -p $out/share/hplip/scan/plugins - for plugin in bb_soap bb_marvell bb_soapht bb_escl; do - cp $plugin-${hplipArch}.so $out/share/hplip/scan/plugins - chmod 0755 $out/share/hplip/scan/plugins/$plugin-${hplipArch}.so - ln -s $out/share/hplip/scan/plugins/$plugin-${hplipArch}.so \ - $out/share/hplip/scan/plugins/$plugin.so - done - - mkdir -p $out/share/hplip/fax/plugins - for plugin in fax_marvell; do - cp $plugin-${hplipArch}.so $out/share/hplip/fax/plugins - chmod 0755 $out/share/hplip/fax/plugins/$plugin-${hplipArch}.so - ln -s $out/share/hplip/fax/plugins/$plugin-${hplipArch}.so \ - $out/share/hplip/fax/plugins/$plugin.so - done - - mkdir -p $out/var/lib/hp - cp ${hplipState} $out/var/lib/hp/hplip.state - ''; - - # The installed executables are just symlinks into $out/share/hplip, - # but wrapPythonPrograms ignores symlinks. We cannot replace the Python - # modules in $out/share/hplip with wrapper scripts because they import - # each other as libraries. Instead, we emulate wrapPythonPrograms by - # 1. Calling patchPythonProgram on the original script in $out/share/hplip - # 2. Making our own wrapper pointing directly to the original script. - dontWrapPythonPrograms = true; - preFixup = '' - buildPythonPath "$out $pythonPath" - - for bin in $out/bin/*; do - py=$(readlink -m $bin) - rm $bin - echo "patching \`$py'..." - patchPythonScript "$py" - echo "wrapping \`$bin'..." - makeWrapper "$py" "$bin" \ - --prefix PATH ':' "$program_PATH" \ - --set PYTHONNOUSERSITE "true" \ - $makeWrapperArgs - done - ''; - - # There are some binaries there, which reference gcc-unwrapped otherwise. - stripDebugList = [ - "share/hplip" - ]; - - postFixup = '' - substituteInPlace $out/etc/hp/hplip.conf --replace /usr $out - # Patch udev rules: - # with plugin, they upload firmware to printers, - # without plugin, they complain about the missing plugin. - substituteInPlace $out/etc/udev/rules.d/56-hpmud.rules \ - --replace {,${bash}}/bin/sh \ - --replace /usr/bin/nohup "" \ - --replace {,${util-linux}/bin/}logger \ - --replace {/usr,$out}/bin - ''; - - meta = with lib; { - description = "Print, scan and fax HP drivers for Linux"; - homepage = "https://developers.hp.com/hp-linux-imaging-and-printing"; - downloadPage = "https://sourceforge.net/projects/hplip/files/hplip/"; - license = if withPlugin - then licenses.unfree - else with licenses; [ mit bsd2 gpl2Plus ]; - platforms = [ "i686-linux" "x86_64-linux" "armv6l-linux" "armv7l-linux" "aarch64-linux" ]; - maintainers = with maintainers; [ jgeerds ttuegel ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/misc/emulators/atari++/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/atari++/default.nix index 2019820510..5e35dcaebd 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/atari++/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/atari++/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, libSM, libX11, libICE, SDL, alsaLib, gcc-unwrapped, libXext }: +{ lib, stdenv, fetchurl, libSM, libX11, libICE, SDL, alsa-lib, gcc-unwrapped, libXext }: stdenv.mkDerivation rec { pname = "atari++"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "04fm2ic2qi4a52mi72wcaxyrpll4k8vvchx3qrik8rhg3jrxgm47"; }; - buildInputs = [ libSM libX11 SDL libICE alsaLib gcc-unwrapped libXext ]; + buildInputs = [ libSM libX11 SDL libICE alsa-lib gcc-unwrapped libXext ]; postFixup = '' patchelf --set-rpath ${lib.makeLibraryPath buildInputs} "$out/bin/atari++" diff --git a/third_party/nixpkgs/pkgs/misc/emulators/attract-mode/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/attract-mode/default.nix index 92c42a1d39..7a3f61fd8d 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/attract-mode/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/attract-mode/default.nix @@ -1,4 +1,4 @@ -{ expat, fetchFromGitHub, ffmpeg_3, fontconfig, freetype, libarchive, libjpeg +{ expat, fetchFromGitHub, ffmpeg, fontconfig, freetype, libarchive, libjpeg , libGLU, libGL, openal, pkg-config, sfml, lib, stdenv, zlib }: @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { ''; buildInputs = [ - expat ffmpeg_3 fontconfig freetype libarchive libjpeg libGLU libGL openal sfml zlib + expat ffmpeg fontconfig freetype libarchive libjpeg libGLU libGL openal sfml zlib ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/misc/emulators/commander-x16/emulator.nix b/third_party/nixpkgs/pkgs/misc/emulators/commanderx16/emulator.nix similarity index 100% rename from third_party/nixpkgs/pkgs/misc/emulators/commander-x16/emulator.nix rename to third_party/nixpkgs/pkgs/misc/emulators/commanderx16/emulator.nix diff --git a/third_party/nixpkgs/pkgs/misc/emulators/commander-x16/rom.nix b/third_party/nixpkgs/pkgs/misc/emulators/commanderx16/rom.nix similarity index 100% rename from third_party/nixpkgs/pkgs/misc/emulators/commander-x16/rom.nix rename to third_party/nixpkgs/pkgs/misc/emulators/commanderx16/rom.nix diff --git a/third_party/nixpkgs/pkgs/misc/emulators/commanderx16/run.nix b/third_party/nixpkgs/pkgs/misc/emulators/commanderx16/run.nix new file mode 100644 index 0000000000..cf14252b48 --- /dev/null +++ b/third_party/nixpkgs/pkgs/misc/emulators/commanderx16/run.nix @@ -0,0 +1,39 @@ +{ lib +, stdenv +, runtimeShell +, symlinkJoin +, writeTextFile +}: + +{ emulator, rom }: + +assert emulator.version == rom.version; + +let + runScript = writeTextFile { + name = "run-x16"; + text = '' + #!${runtimeShell} + + defaultRom="${rom}/share/x16-rom/rom.bin" + + exec "${emulator}/bin/x16emu" -rom $defaultRom "$@" + ''; + executable = true; + destination = "/bin/run-x16"; + }; +in +symlinkJoin { + name = "run-x16-${emulator.version}"; + + paths = [ + emulator + rom + runScript + ]; +} +# TODO [ AndersonTorres ]: + +# 1. Parse the command line in order to allow the user to set an optional +# rom-file +# 2. generate runScript based on symlinkJoin (maybe a postBuild?) diff --git a/third_party/nixpkgs/pkgs/misc/emulators/desmume/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/desmume/default.nix index ff17833f69..03e9774390 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/desmume/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/desmume/default.nix @@ -3,7 +3,7 @@ , libXmu , lua , tinyxml -, agg, alsaLib, soundtouch, openal +, agg, alsa-lib, soundtouch, openal , desktop-file-utils , gtk2, gtkglext, libglade , libGLU, libpcap, SDL, zziplib }: @@ -28,7 +28,7 @@ stdenv.mkDerivation rec { CXXFLAGS = "-fpermissive"; buildInputs = - [ pkg-config libtool intltool libXmu lua agg alsaLib soundtouch + [ pkg-config libtool intltool libXmu lua agg alsa-lib soundtouch openal desktop-file-utils gtk2 gtkglext libglade libGLU libpcap SDL zziplib tinyxml ]; diff --git a/third_party/nixpkgs/pkgs/misc/emulators/dolphin-emu/master.nix b/third_party/nixpkgs/pkgs/misc/emulators/dolphin-emu/master.nix index 1162791456..8e08be28ed 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/dolphin-emu/master.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/dolphin-emu/master.nix @@ -1,7 +1,7 @@ { lib, stdenv, fetchFromGitHub, makeDesktopItem, pkg-config, cmake , wrapQtAppsHook, qtbase, bluez, ffmpeg, libao, libGLU, libGL, pcre, gettext , libXrandr, libusb1, lzo, libpthreadstubs, libXext, libXxf86vm, libXinerama -, libSM, libXdmcp, readline, openal, udev, libevdev, portaudio, curl, alsaLib +, libSM, libXdmcp, readline, openal, udev, libevdev, portaudio, curl, alsa-lib , miniupnpc, enet, mbedtls, soundtouch, sfml , vulkan-loader ? null, libpulseaudio ? null @@ -39,7 +39,7 @@ in stdenv.mkDerivation rec { portaudio libusb1 libpng hidapi miniupnpc enet mbedtls soundtouch sfml qtbase ] ++ lib.optionals stdenv.isLinux [ - bluez udev libevdev alsaLib vulkan-loader + bluez udev libevdev alsa-lib vulkan-loader ] ++ lib.optionals stdenv.isDarwin [ CoreBluetooth OpenGL ForceFeedback IOKit ]; diff --git a/third_party/nixpkgs/pkgs/misc/emulators/emulationstation/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/emulationstation/default.nix index 458b27d330..4cb5ca9ec2 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/emulationstation/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/emulationstation/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, pkg-config, cmake, curl, boost, eigen -, freeimage, freetype, libGLU, libGL, SDL2, alsaLib, libarchive +, freeimage, freetype, libGLU, libGL, SDL2, alsa-lib, libarchive , fetchpatch }: stdenv.mkDerivation { @@ -21,7 +21,7 @@ stdenv.mkDerivation { ]; nativeBuildInputs = [ pkg-config cmake ]; - buildInputs = [ alsaLib boost curl eigen freeimage freetype libarchive libGLU libGL SDL2 ]; + buildInputs = [ alsa-lib boost curl eigen freeimage freetype libarchive libGLU libGL SDL2 ]; installPhase = '' install -D ../emulationstation $out/bin/emulationstation diff --git a/third_party/nixpkgs/pkgs/misc/emulators/epsxe/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/epsxe/default.nix index 7cdd88d0b9..f70e90e987 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/epsxe/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/epsxe/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, curl, gdk-pixbuf, glib, gtk3, libGLU, libGL, +{ lib, stdenv, fetchurl, alsa-lib, curl, gdk-pixbuf, glib, gtk3, libGLU, libGL, libX11, openssl_1_0_2, ncurses5, SDL, SDL_ttf, unzip, zlib, wrapGAppsHook, autoPatchelfHook }: with lib; @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { sourceRoot = "."; buildInputs = [ - alsaLib + alsa-lib curl gdk-pixbuf glib diff --git a/third_party/nixpkgs/pkgs/misc/emulators/higan/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/higan/default.nix index c7bc7e9f97..8e10b7bb31 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/higan/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/higan/default.nix @@ -4,7 +4,7 @@ , udev , libGLU, libGL, SDL2 , libao, openal, libpulseaudio -, alsaLib +, alsa-lib , gtk2, gtksourceview , runtimeShell # Darwin dependencies @@ -40,7 +40,7 @@ stdenv.mkDerivation rec { ++ optionals stdenv.isDarwin [ libicns ]; buildInputs = [ SDL2 libao ] - ++ optionals stdenv.isLinux [ alsaLib udev libpulseaudio openal + ++ optionals stdenv.isLinux [ alsa-lib udev libpulseaudio openal gtk2 gtksourceview libX11 libXv libGLU libGL ] ++ optionals stdenv.isDarwin [ Carbon Cocoa OpenGL OpenAL ]; diff --git a/third_party/nixpkgs/pkgs/misc/emulators/kega-fusion/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/kega-fusion/default.nix index 1b00a55fe0..e8feb1ea7e 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/kega-fusion/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/kega-fusion/default.nix @@ -1,7 +1,7 @@ -{ stdenv, lib, writeText, fetchurl, upx, libGLU, glib, gtk2, alsaLib, libSM, libX11, gdk-pixbuf, pango, libXinerama, mpg123, runtimeShell }: +{ stdenv, lib, writeText, fetchurl, upx, libGLU, glib, gtk2, alsa-lib, libSM, libX11, gdk-pixbuf, pango, libXinerama, mpg123, runtimeShell }: let - libPath = lib.makeLibraryPath [ stdenv.cc.cc libGLU glib gtk2 alsaLib libSM libX11 gdk-pixbuf pango libXinerama ]; + libPath = lib.makeLibraryPath [ stdenv.cc.cc libGLU glib gtk2 alsa-lib libSM libX11 gdk-pixbuf pango libXinerama ]; in stdenv.mkDerivation { pname = "kega-fusion"; diff --git a/third_party/nixpkgs/pkgs/misc/emulators/mame/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/mame/default.nix index e803a13068..26abda81b3 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/mame/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/mame/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, mkDerivation, fetchFromGitHub, makeDesktopItem, makeWrapper -, python, pkg-config, SDL2, SDL2_ttf, alsaLib, which, qtbase, libXinerama +, python, pkg-config, SDL2, SDL2_ttf, alsa-lib, which, qtbase, libXinerama , libpcap, CoreAudioKit, ForceFeedback , installShellFiles }: @@ -41,7 +41,7 @@ in mkDerivation { buildInputs = [ SDL2 SDL2_ttf qtbase libXinerama ] - ++ lib.optional stdenv.isLinux alsaLib + ++ lib.optional stdenv.isLinux alsa-lib ++ lib.optionals stdenv.isDarwin [ libpcap CoreAudioKit ForceFeedback ] ; nativeBuildInputs = [ python pkg-config which makeWrapper installShellFiles ]; diff --git a/third_party/nixpkgs/pkgs/misc/emulators/mednafen/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/mednafen/default.nix index aaf736f3e5..f76ddb78bd 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/mednafen/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/mednafen/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, pkg-config, freeglut, libGLU, libGL, libcdio, libjack2 -, libsamplerate, libsndfile, libX11, SDL2, SDL2_net, zlib, alsaLib }: +, libsamplerate, libsndfile, libX11, SDL2, SDL2_net, zlib, alsa-lib }: stdenv.mkDerivation rec { pname = "mednafen"; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { libGLU libGL libcdio libjack2 - alsaLib + alsa-lib libsamplerate libsndfile libX11 diff --git a/third_party/nixpkgs/pkgs/misc/emulators/nestopia/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/nestopia/default.nix index 502e5c6472..e19b97a477 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/nestopia/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/nestopia/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, pkg-config, SDL2, alsaLib, gtk3 +{ lib, stdenv, fetchFromGitHub, pkg-config, SDL2, alsa-lib, gtk3 , makeWrapper, libGLU, libGL, libarchive, libao, unzip, xdg-utils , epoxy, gdk-pixbuf, gnome, wrapGAppsHook }: @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { buildInputs = [ SDL2 - alsaLib + alsa-lib epoxy gtk3 gdk-pixbuf diff --git a/third_party/nixpkgs/pkgs/misc/emulators/openmsx/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/openmsx/default.nix index d34a921e17..61d416e17a 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/openmsx/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/openmsx/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchFromGitHub, pkg-config , python -, alsaLib, glew, libGL, libpng +, alsa-lib, glew, libGL, libpng , libogg, libtheora, libvorbis , SDL2, SDL2_image, SDL2_ttf , freetype, tcl, zlib @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config python ]; - buildInputs = [ alsaLib glew libGL libpng + buildInputs = [ alsa-lib glew libGL libpng libogg libtheora libvorbis freetype SDL2 SDL2_image SDL2_ttf tcl zlib ]; diff --git a/third_party/nixpkgs/pkgs/misc/emulators/pcem/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/pcem/default.nix index 6e7e3bc637..2e6aa683e4 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/pcem/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/pcem/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchzip, wxGTK31, coreutils, SDL2, openal, alsaLib, pkg-config +{ stdenv, lib, fetchzip, wxGTK31, coreutils, SDL2, openal, alsa-lib, pkg-config , autoreconfHook, withNetworking ? true, withALSA ? true }: stdenv.mkDerivation rec { @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook pkg-config ]; buildInputs = [ wxGTK31 coreutils SDL2 openal ] - ++ lib.optional withALSA alsaLib; + ++ lib.optional withALSA alsa-lib; configureFlags = [ "--enable-release-build" ] ++ lib.optional withNetworking "--enable-networking" diff --git a/third_party/nixpkgs/pkgs/misc/emulators/pcsx2/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/pcsx2/default.nix index 476ea7122c..13d2ea74f3 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/pcsx2/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/pcsx2/default.nix @@ -1,4 +1,4 @@ -{ alsaLib +{ alsa-lib , cmake , fetchFromGitHub , fmt @@ -71,7 +71,7 @@ stdenv.mkDerivation { nativeBuildInputs = [ cmake makeWrapper perl pkg-config wrapGAppsHook ]; buildInputs = [ - alsaLib + alsa-lib fmt gettext glib diff --git a/third_party/nixpkgs/pkgs/misc/emulators/ppsspp/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/ppsspp/default.nix index 4f5b4f7d69..124b8cb8e6 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/ppsspp/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/ppsspp/default.nix @@ -1,5 +1,6 @@ { mkDerivation , fetchFromGitHub +, fetchpatch , SDL2 , cmake , ffmpeg @@ -26,6 +27,15 @@ mkDerivation rec { sha256 = "sha256-vfp/vacIItlPP5dR7jzDT7oOUNFnjvvdR46yi79EJKU="; }; + patches = [ + # fix compability with ffmpeg 4.4, remove on next release after 1.11 + (fetchpatch { + name = "fix_ffmpeg_4.4.patch"; + url = "https://patch-diff.githubusercontent.com/raw/hrydgard/ppsspp/pull/14176.patch"; + sha256 = "sha256-ecDoOydaLfL6+eFpahcO1TnRl866mZZVHlr6Qrib1mo="; + }) + ]; + postPatch = '' substituteInPlace git-version.cmake --replace unknown ${src.rev} substituteInPlace UI/NativeApp.cpp --replace /usr/share $out/share diff --git a/third_party/nixpkgs/pkgs/misc/emulators/proton-caller/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/proton-caller/default.nix index f8295c6c5b..a69c1b3763 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/proton-caller/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/proton-caller/default.nix @@ -1,31 +1,23 @@ -{ lib, fetchFromGitHub, rustPlatform, installShellFiles }: +{ lib, fetchFromGitHub, rustPlatform }: rustPlatform.buildRustPackage rec { pname = "proton-caller"; - version = "2.2.3"; + version = "2.3.0"; src = fetchFromGitHub { owner = "caverym"; repo = pname; rev = version; - sha256 = "0968pmapg6157q4rvfp690l1sjnws8hm62lvm8kaaqysac339z7z"; + sha256 = "1rj0f8jzmrvj6gz1rcdjmxdqk2i5cxhz9ji4217kwyb6h1h0jmdk"; }; - cargoSha256 = "1vp2vvgy8z350a59k1c3s5ww6w2wikiha4s7jkkz9khl0spn19a8"; - - nativeBuildInputs = [ installShellFiles ]; - - outputs = [ "out" "man" ]; - - postInstall = '' - installManPage manual/proton-call.6 - ''; + cargoSha256 = "165kzza1m8h37y1ir0d0hp0z645h4ihkyj83fii69f18gk47r3kg"; meta = with lib; { description = "Run Windows programs with Proton"; changelog = "https://github.com/caverym/proton-caller/releases/tag/${version}"; homepage = "https://github.com/caverym/proton-caller"; - license = licenses.gpl3Only; + license = licenses.mit; maintainers = with maintainers; [ kho-dialga ]; }; } diff --git a/third_party/nixpkgs/pkgs/misc/emulators/punes/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/punes/default.nix index 68f48bc7b4..c0bf7a223a 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/punes/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/punes/default.nix @@ -11,19 +11,19 @@ , pkg-config , ffmpeg , libGLU -, alsaLib +, alsa-lib , sndio }: mkDerivation rec { pname = "punes"; - version = "unstable-2021-04-25"; + version = "unstable-2021-06-05"; src = fetchFromGitHub { owner = "punesemu"; repo = "puNES"; - rev = "4b4c3495a56d3989544cb56079ce641da8aa9b35"; - sha256 = "1wszvdgm38513v26p14k58shbkxn1qhkn8l0hsqi04vviicad59s"; + rev = "07fd123f62b2d075894a0cc966124db7b427b791"; + sha256 = "1wxff7b397ayd2s2v14w6a0zfgklc7y0kv3mkz1gg5x47mnll24l"; }; postPatch = '' @@ -34,7 +34,7 @@ mkDerivation rec { nativeBuildInputs = [ autoreconfHook cmake pkg-config qttools ]; buildInputs = [ ffmpeg qtbase qtsvg libGLU ] - ++ lib.optionals stdenv.hostPlatform.isLinux [ alsaLib ] + ++ lib.optionals stdenv.hostPlatform.isLinux [ alsa-lib ] ++ lib.optionals stdenv.hostPlatform.isBSD [ sndio ]; dontUseCmakeConfigure = true; diff --git a/third_party/nixpkgs/pkgs/misc/emulators/reicast/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/reicast/default.nix index 8c0bc30d43..f9e8e4d693 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/reicast/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/reicast/default.nix @@ -3,7 +3,7 @@ , cmake , pkg-config , curl -, alsaLib +, alsa-lib , libGLU , libX11 , libevdev @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; buildInputs = [ curl - alsaLib + alsa-lib libGLU libX11 libevdev diff --git a/third_party/nixpkgs/pkgs/misc/emulators/retroarch/cores.nix b/third_party/nixpkgs/pkgs/misc/emulators/retroarch/cores.nix index 7153c378f8..bddabede0a 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/retroarch/cores.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/retroarch/cores.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchgit, fetchFromGitHub, fetchFromGitLab, fetchpatch, cmake, pkg-config, makeWrapper, python27, python3, retroarch -, alsaLib, fluidsynth, curl, hidapi, libGLU, gettext, glib, gtk2, portaudio, SDL, SDL_net, SDL2, SDL2_image, libGL +, alsa-lib, fluidsynth, curl, hidapi, libGLU, gettext, glib, gtk2, portaudio, SDL, SDL_net, SDL2, SDL2_image, libGL , ffmpeg, pcre, libevdev, libpng, libjpeg, libzip, udev, libvorbis, snappy, which, hexdump , miniupnpc, sfml, xorg, zlib, nasm, libpcap, boost, icu, openssl , buildPackages }: @@ -548,7 +548,7 @@ in with lib.licenses; description = "Port of MAME to libretro"; license = gpl2Plus; - extraBuildInputs = [ alsaLib libGLU libGL portaudio python27 xorg.libX11 ]; + extraBuildInputs = [ alsa-lib libGLU libGL portaudio python27 xorg.libX11 ]; postPatch = '' # Prevent the failure during the parallel building of: # make -C 3rdparty/genie/build/gmake.linux -f genie.make obj/Release/src/host/lua-5.3.0/src/lgc.o @@ -617,7 +617,7 @@ in with lib.licenses; description = "Port of MAME ~2015 to libretro"; license = gpl2Plus; extraNativeBuildInputs = [ python27 ]; - extraBuildInputs = [ alsaLib ]; + extraBuildInputs = [ alsa-lib ]; makefile = "Makefile"; }; @@ -638,7 +638,7 @@ in with lib.licenses; description = "Port of MAME ~2016 to libretro"; license = gpl2Plus; extraNativeBuildInputs = [ python27 ]; - extraBuildInputs = [ alsaLib ]; + extraBuildInputs = [ alsa-lib ]; postPatch = '' # Prevent the failure during the parallel building of: # make -C 3rdparty/genie/build/gmake.linux -f genie.make obj/Release/src/host/lua-5.3.0/src/lgc.o diff --git a/third_party/nixpkgs/pkgs/misc/emulators/retroarch/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/retroarch/default.nix index e6f1b4f1a7..86ca803d96 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/retroarch/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/retroarch/default.nix @@ -1,7 +1,7 @@ { lib, stdenv, fetchFromGitHub, which, pkg-config, makeWrapper , ffmpeg, libGLU, libGL, freetype, libxml2, python3 , libobjc, AppKit, Foundation -, alsaLib ? null +, alsa-lib ? null , libdrm ? null , libpulseaudio ? null , libv4l ? null @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { ++ optional enableNvidiaCgToolkit nvidia_cg_toolkit ++ optional withVulkan vulkan-loader ++ optionals stdenv.isDarwin [ libobjc AppKit Foundation ] - ++ optionals stdenv.isLinux [ alsaLib libdrm libpulseaudio libv4l libX11 + ++ optionals stdenv.isLinux [ alsa-lib libdrm libpulseaudio libv4l libX11 libXdmcp libXext libXxf86vm mesa udev wayland libxkbcommon ]; diff --git a/third_party/nixpkgs/pkgs/misc/emulators/rpcs3/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/rpcs3/default.nix index 8eab2f0572..bf1dc1c957 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/rpcs3/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/rpcs3/default.nix @@ -4,7 +4,7 @@ , sdl2Support ? true, SDL2 , pulseaudioSupport ? true, libpulseaudio , waylandSupport ? true, wayland -, alsaSupport ? true, alsaLib +, alsaSupport ? true, alsa-lib }: let @@ -50,7 +50,7 @@ mkDerivation { libevdev zlib libusb1 curl python3 ] ++ lib.optional sdl2Support SDL2 ++ lib.optional pulseaudioSupport libpulseaudio - ++ lib.optional alsaSupport alsaLib + ++ lib.optional alsaSupport alsa-lib ++ lib.optional waylandSupport wayland; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/misc/emulators/ruffle/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/ruffle/default.nix index 11be67b6d9..84837322e9 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/ruffle/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/ruffle/default.nix @@ -1,4 +1,4 @@ -{ alsaLib +{ alsa-lib , fetchFromGitHub , makeWrapper , openssl @@ -29,7 +29,7 @@ rustPlatform.buildRustPackage rec { ]; buildInputs = [ - alsaLib + alsa-lib openssl wayland xorg.libX11 diff --git a/third_party/nixpkgs/pkgs/misc/emulators/uae/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/uae/default.nix index 75b86eaeeb..803efe5149 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/uae/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/uae/default.nix @@ -1,4 +1,4 @@ -{lib, stdenv, fetchurl, pkg-config, gtk2, alsaLib, SDL}: +{lib, stdenv, fetchurl, pkg-config, gtk2, alsa-lib, SDL}: stdenv.mkDerivation rec { name = "uae-0.8.29"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { configureFlags = [ "--with-sdl" "--with-sdl-sound" "--with-sdl-gfx" "--with-alsa" ]; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ gtk2 alsaLib SDL ]; + buildInputs = [ gtk2 alsa-lib SDL ]; hardeningDisable = [ "format" ]; LDFLAGS = [ "-lm" ]; diff --git a/third_party/nixpkgs/pkgs/misc/emulators/vice/default.nix b/third_party/nixpkgs/pkgs/misc/emulators/vice/default.nix index 7d63927e33..f8b9e5906f 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/vice/default.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/vice/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, bison, flex, perl, libpng, giflib, libjpeg, alsaLib, readline, libGLU, libGL, libXaw +{ lib, stdenv, fetchurl, bison, flex, perl, libpng, giflib, libjpeg, alsa-lib, readline, libGLU, libGL, libXaw , pkg-config, gtk2, SDL, autoreconfHook, makeDesktopItem }: @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { sha256 = "0h0jbml02s2a36hr78dxv1zshmfhxp1wadpcdl09aq416fb1bf1y"; }; - buildInputs = [ bison flex perl libpng giflib libjpeg alsaLib readline libGLU libGL + buildInputs = [ bison flex perl libpng giflib libjpeg alsa-lib readline libGLU libGL pkg-config gtk2 SDL autoreconfHook libXaw ]; dontDisableStatic = true; configureFlags = [ "--enable-fullscreen --enable-gnomeui" ]; diff --git a/third_party/nixpkgs/pkgs/misc/emulators/wine/base.nix b/third_party/nixpkgs/pkgs/misc/emulators/wine/base.nix index 8553ab8364..0023d9878b 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/wine/base.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/wine/base.nix @@ -59,7 +59,7 @@ stdenv.mkDerivation ((lib.optionalAttrs (buildScript != null) { ++ lib.optional gphoto2Support pkgs.libgphoto2 ++ lib.optional ldapSupport pkgs.openldap ++ lib.optional fontconfigSupport pkgs.fontconfig - ++ lib.optional alsaSupport pkgs.alsaLib + ++ lib.optional alsaSupport pkgs.alsa-lib ++ lib.optional pulseaudioSupport pkgs.libpulseaudio ++ lib.optional xineramaSupport pkgs.xorg.libXinerama ++ lib.optional udevSupport pkgs.udev diff --git a/third_party/nixpkgs/pkgs/misc/emulators/wine/sources.nix b/third_party/nixpkgs/pkgs/misc/emulators/wine/sources.nix index 6103472a7c..72a5240dfc 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/wine/sources.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/wine/sources.nix @@ -13,9 +13,9 @@ let fetchurl = args@{url, sha256, ...}: in rec { stable = fetchurl rec { - version = "6.0"; + version = "6.0.1"; url = "https://dl.winehq.org/wine/source/6.0/wine-${version}.tar.xz"; - sha256 = "sha256-tJMGXy+D7kKcYuLsWGmKPPY+94ci4bIHZYIxUuhYLFY="; + sha256 = "sha256-Ogmh7Jyh6h1PcpWY14JxeXP09kRYZn+7dX0SLzoB2ko="; ## see http://wiki.winehq.org/Gecko gecko32 = fetchurl rec { @@ -44,16 +44,16 @@ in rec { unstable = fetchurl rec { # NOTE: Don't forget to change the SHA256 for staging as well. - version = "6.9"; + version = "6.11"; url = "https://dl.winehq.org/wine/source/6.x/wine-${version}.tar.xz"; - sha256 = "sha256-GFVOYB3vhqmiAXKwhcZoMpFPwh511VX25U/4nn6uW/4="; + sha256 = "02v725qjsibiv6ad6hxsc6199dvlmnp7983286a4k8rygqnvqln9"; inherit (stable) gecko32 gecko64; ## see http://wiki.winehq.org/Mono mono = fetchurl rec { - version = "6.1.1"; + version = "6.2.0"; url = "https://dl.winehq.org/wine/wine-mono/${version}/wine-mono-${version}-x86.msi"; - sha256 = "sha256-rDsUvq/eNLhIIofllwABE9wGqRXzLJ/QbHfrgZB544s="; + sha256 = "sha256-zY1TUT2DV7KHama6sIllTvmUH0LvaQ+1VcZJP1OB28o="; }; patches = [ @@ -65,17 +65,12 @@ in rec { staging = fetchFromGitHub rec { # https://github.com/wine-staging/wine-staging/releases inherit (unstable) version; - sha256 = "sha256-g0NmiypafOAmKDRoRf4uz5NnhFo6uga0fKYNCF29jbE="; + sha256 = "0gbci8fjvl1bdz7fj4bh25mqrgi1i04q5na2ckv9hj9nh9x7crbm"; owner = "wine-staging"; repo = "wine-staging"; - #rev = "v${version}"; - # FIXME: replace with line above with 6.10 release - # Fix https://bugs.winehq.org/show_bug.cgi?id=51172 - rev = "5bbe3e47a559b3c04bc8791e0b398a271c772af7"; + rev = "v${version}"; - # Actually only "d3d11-Deferred_Context" cause problems, two others only dependencies - # see FIXME above - disabledPatchsets = [ "d3d11-Deferred_Context" "wined3d-CSMT_Main" "nvapi-Stub_DLL" "nvcuvid-CUDA_Video_Support" "nvencodeapi-Video_Encoder" ]; + disabledPatchsets = [ ]; }; winetricks = fetchFromGitHub rec { diff --git a/third_party/nixpkgs/pkgs/misc/emulators/yuzu/base.nix b/third_party/nixpkgs/pkgs/misc/emulators/yuzu/base.nix index c2b8061485..1160a5fc1e 100644 --- a/third_party/nixpkgs/pkgs/misc/emulators/yuzu/base.nix +++ b/third_party/nixpkgs/pkgs/misc/emulators/yuzu/base.nix @@ -1,7 +1,7 @@ { pname, version, src, branchName , stdenv, lib, fetchFromGitHub, fetchpatch, wrapQtAppsHook , cmake, pkg-config -, libpulseaudio, libjack2, alsaLib, sndio +, libpulseaudio, libjack2, alsa-lib, sndio , vulkan-loader, vulkan-headers , qtbase, qtwebengine, qttools , nlohmann_json, rapidjson @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config wrapQtAppsHook ]; buildInputs = [ - libpulseaudio libjack2 alsaLib sndio + libpulseaudio libjack2 alsa-lib sndio vulkan-loader vulkan-headers qtbase qtwebengine qttools nlohmann_json rapidjson diff --git a/third_party/nixpkgs/pkgs/misc/jackaudio/default.nix b/third_party/nixpkgs/pkgs/misc/jackaudio/default.nix index 865ab6ee1f..7474a304f0 100644 --- a/third_party/nixpkgs/pkgs/misc/jackaudio/default.nix +++ b/third_party/nixpkgs/pkgs/misc/jackaudio/default.nix @@ -5,7 +5,7 @@ , aften, AudioUnit, CoreAudio, libobjc, Accelerate # Optional Dependencies -, dbus ? null, libffado ? null, alsaLib ? null +, dbus ? null, libffado ? null, alsa-lib ? null , libopus ? null # Extra options @@ -22,7 +22,7 @@ let optDbus = if stdenv.isDarwin then null else shouldUsePkg dbus; optPythonDBus = if libOnly then null else shouldUsePkg dbus-python; optLibffado = if libOnly then null else shouldUsePkg libffado; - optAlsaLib = if libOnly then null else shouldUsePkg alsaLib; + optAlsaLib = if libOnly then null else shouldUsePkg alsa-lib; optLibopus = shouldUsePkg libopus; in stdenv.mkDerivation rec { diff --git a/third_party/nixpkgs/pkgs/misc/jackaudio/jack1.nix b/third_party/nixpkgs/pkgs/misc/jackaudio/jack1.nix index c1ccc66848..aebe32497c 100644 --- a/third_party/nixpkgs/pkgs/misc/jackaudio/jack1.nix +++ b/third_party/nixpkgs/pkgs/misc/jackaudio/jack1.nix @@ -1,13 +1,13 @@ { lib, stdenv, fetchurl, pkg-config # Optional Dependencies -, alsaLib ? null, db ? null, libuuid ? null, libffado ? null, celt ? null +, alsa-lib ? null, db ? null, libuuid ? null, libffado ? null, celt ? null }: let shouldUsePkg = pkg: if pkg != null && lib.meta.availableOn stdenv.hostPlatform pkg then pkg else null; - optAlsaLib = shouldUsePkg alsaLib; + optAlsaLib = shouldUsePkg alsa-lib; optDb = shouldUsePkg db; optLibuuid = shouldUsePkg libuuid; optLibffado = shouldUsePkg libffado; diff --git a/third_party/nixpkgs/pkgs/misc/jitsi-meet-prosody/default.nix b/third_party/nixpkgs/pkgs/misc/jitsi-meet-prosody/default.nix new file mode 100644 index 0000000000..0ab939af0f --- /dev/null +++ b/third_party/nixpkgs/pkgs/misc/jitsi-meet-prosody/default.nix @@ -0,0 +1,36 @@ +{ lib, stdenv, fetchurl, dpkg, nixosTests }: + +stdenv.mkDerivation rec { + pname = "jitsi-meet-prosody"; + version = "1.0.5056"; + src = fetchurl { + url = "https://download.jitsi.org/stable/${pname}_${version}-1_all.deb"; + sha256 = "06qxa9h2ry92xrk2jklp76nv3sl8nvykdvsqmhn33lz6q6vmw2xr"; + }; + + dontBuild = true; + + unpackCmd = "${dpkg}/bin/dpkg-deb -x $src debcontents"; + + installPhase = '' + runHook preInstall + mkdir -p $out/share + mv usr/share/jitsi-meet/prosody-plugins $out/share/ + runHook postInstall + ''; + + passthru.tests = { + single-node-smoke-test = nixosTests.jitsi-meet; + }; + + meta = with lib; { + description = "Prosody configuration for Jitsi Meet"; + longDescription = '' + This package contains configuration for Prosody to be used with Jitsi Meet. + ''; + homepage = "https://github.com/jitsi/jitsi-meet/"; + license = licenses.asl20; + maintainers = teams.jitsi.members; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/misc/logging/beats/6.x.nix b/third_party/nixpkgs/pkgs/misc/logging/beats/6.x.nix index ce80b174d3..81b8ba0ab5 100644 --- a/third_party/nixpkgs/pkgs/misc/logging/beats/6.x.nix +++ b/third_party/nixpkgs/pkgs/misc/logging/beats/6.x.nix @@ -1,4 +1,4 @@ -{ lib, fetchFromGitHub, elk6Version, buildGoPackage, libpcap, systemd }: +{ lib, fetchFromGitHub, elk6Version, buildGoPackage, libpcap, nixosTests, systemd }: let beat = package : extraArgs : buildGoPackage (rec { name = "${package}-${version}"; @@ -22,10 +22,17 @@ let beat = package : extraArgs : buildGoPackage (rec { platforms = platforms.linux; }; } // extraArgs); -in { +in rec { filebeat6 = beat "filebeat" {meta.description = "Lightweight shipper for logfiles";}; heartbeat6 = beat "heartbeat" {meta.description = "Lightweight shipper for uptime monitoring";}; - metricbeat6 = beat "metricbeat" {meta.description = "Lightweight shipper for metrics";}; + metricbeat6 = beat "metricbeat" { + meta.description = "Lightweight shipper for metrics"; + passthru.tests = + assert metricbeat6.drvPath == nixosTests.elk.ELK-6.elkPackages.metricbeat.drvPath; + { + elk = nixosTests.elk.ELK-6; + }; + }; packetbeat6 = beat "packetbeat" { buildInputs = [ libpcap ]; meta.broken = true; diff --git a/third_party/nixpkgs/pkgs/misc/logging/beats/7.x.nix b/third_party/nixpkgs/pkgs/misc/logging/beats/7.x.nix index 43ea85508c..77e14e96c5 100644 --- a/third_party/nixpkgs/pkgs/misc/logging/beats/7.x.nix +++ b/third_party/nixpkgs/pkgs/misc/logging/beats/7.x.nix @@ -1,4 +1,4 @@ -{ lib, fetchFromGitHub, elk7Version, buildGoPackage, libpcap, systemd }: +{ lib, fetchFromGitHub, elk7Version, buildGoPackage, libpcap, nixosTests, systemd }: let beat = package : extraArgs : buildGoPackage (rec { name = "${package}-${version}"; @@ -22,10 +22,17 @@ let beat = package : extraArgs : buildGoPackage (rec { platforms = platforms.linux; }; } // extraArgs); -in { +in rec { filebeat7 = beat "filebeat" {meta.description = "Lightweight shipper for logfiles";}; heartbeat7 = beat "heartbeat" {meta.description = "Lightweight shipper for uptime monitoring";}; - metricbeat7 = beat "metricbeat" {meta.description = "Lightweight shipper for metrics";}; + metricbeat7 = beat "metricbeat" { + meta.description = "Lightweight shipper for metrics"; + passthru.tests = + assert metricbeat7.drvPath == nixosTests.elk.ELK-7.elkPackages.metricbeat.drvPath; + { + elk = nixosTests.elk.ELK-7; + }; + }; packetbeat7 = beat "packetbeat" { buildInputs = [ libpcap ]; meta.description = "Network packet analyzer that ships data to Elasticsearch"; diff --git a/third_party/nixpkgs/pkgs/misc/screensavers/multilockscreen/default.nix b/third_party/nixpkgs/pkgs/misc/screensavers/multilockscreen/default.nix index 3049f3ba2a..b0c157c778 100644 --- a/third_party/nixpkgs/pkgs/misc/screensavers/multilockscreen/default.nix +++ b/third_party/nixpkgs/pkgs/misc/screensavers/multilockscreen/default.nix @@ -16,13 +16,13 @@ let in stdenv.mkDerivation rec { pname = "multilockscreen"; - version = "1.1.0"; + version = "1.2.0"; src = fetchFromGitHub { owner = "jeffmhubbard"; repo = pname; rev = "v${version}"; - sha256 = "1vdai1ymkzlkh5l69s8zpyj2klzm8zyak00vd4p7lcldxfj861ig"; + sha256 = "1bfpbazvhaz9x356nsghz0czysh9b75g79cd9s35v0x0rrzdr9qj"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/misc/screensavers/xlockmore/default.nix b/third_party/nixpkgs/pkgs/misc/screensavers/xlockmore/default.nix index 17b22ce072..600528a794 100644 --- a/third_party/nixpkgs/pkgs/misc/screensavers/xlockmore/default.nix +++ b/third_party/nixpkgs/pkgs/misc/screensavers/xlockmore/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchurl, pam ? null, libX11, libXext, libXinerama -, libXdmcp, libXt }: +, libXdmcp, libXt, autoreconfHook }: stdenv.mkDerivation rec { name = "xlockmore-5.66"; @@ -11,7 +11,8 @@ stdenv.mkDerivation rec { }; # Optionally, it can use GTK. - buildInputs = [ pam libX11 libXext libXinerama libXdmcp libXt ]; + buildInputs = [ pam libX11 libXext.dev libXinerama libXdmcp libXt ]; + nativeBuildInputs = [ autoreconfHook ]; # Don't try to install `xlock' setuid. Password authentication works # fine via PAM without super user privileges. diff --git a/third_party/nixpkgs/pkgs/misc/sndio/default.nix b/third_party/nixpkgs/pkgs/misc/sndio/default.nix index 3b4c34702d..9e4035801f 100644 --- a/third_party/nixpkgs/pkgs/misc/sndio/default.nix +++ b/third_party/nixpkgs/pkgs/misc/sndio/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, fixDarwinDylibNames }: +{ lib, stdenv, fetchurl, alsa-lib, fixDarwinDylibNames }: stdenv.mkDerivation rec { pname = "sndio"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = lib.optional stdenv.hostPlatform.isDarwin fixDarwinDylibNames; - buildInputs = lib.optional stdenv.hostPlatform.isLinux alsaLib; + buildInputs = lib.optional stdenv.hostPlatform.isLinux alsa-lib; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/misc/solfege/default.nix b/third_party/nixpkgs/pkgs/misc/solfege/default.nix index af2ce3f53c..fc7062d904 100644 --- a/third_party/nixpkgs/pkgs/misc/solfege/default.nix +++ b/third_party/nixpkgs/pkgs/misc/solfege/default.nix @@ -1,7 +1,7 @@ { lib, fetchurl, gettext, pkg-config, texinfo, wrapGAppsHook , buildPythonApplication, pycairo, pygobject3 , gobject-introspection, gtk3, librsvg -, alsaUtils, timidity, mpg123, vorbis-tools, csound, lilypond +, alsa-utils, timidity, mpg123, vorbis-tools, csound, lilypond }: buildPythonApplication rec { @@ -24,7 +24,7 @@ buildPythonApplication rec { propagatedBuildInputs = [ pycairo pygobject3 ]; preBuild = '' - sed -i -e 's|wav_player=.*|wav_player=${alsaUtils}/bin/aplay|' \ + sed -i -e 's|wav_player=.*|wav_player=${alsa-utils}/bin/aplay|' \ -e 's|midi_player=.*|midi_player=${timidity}/bin/timidity|' \ -e 's|mp3_player=.*|mp3_player=${mpg123}/bin/mpg123|' \ -e 's|ogg_player=.*|ogg_player=${vorbis-tools}/bin/ogg123|' \ diff --git a/third_party/nixpkgs/pkgs/misc/tmux-plugins/default.nix b/third_party/nixpkgs/pkgs/misc/tmux-plugins/default.nix index d8ab3dcc5c..8d511c05af 100644 --- a/third_party/nixpkgs/pkgs/misc/tmux-plugins/default.nix +++ b/third_party/nixpkgs/pkgs/misc/tmux-plugins/default.nix @@ -127,12 +127,12 @@ in rec { dracula = mkTmuxPlugin rec { pluginName = "dracula"; - version = "unstable-2021-02-18"; + version = "1.0"; src = fetchFromGitHub { owner = "dracula"; repo = "tmux"; - rev = "8d1a7fa41b773d4f7b53dfff2d9fc5166d34f104"; - sha256 = "DG+oKbTkYO4hwoOlOqW5IuCLdVEttlvLM2en4DUHyMY="; + rev = "v${version}"; + sha256 = "YINyER/HT3L7RpTclD3UNiCRj1CL4GPCBBEUJRqUyEQ="; }; meta = with lib; { homepage = "https://draculatheme.com/tmux"; @@ -576,12 +576,12 @@ in rec { yank = mkTmuxPlugin { pluginName = "yank"; - version = "unstable-2019-12-02"; + version = "unstable-2021-06-20"; src = fetchFromGitHub { owner = "tmux-plugins"; repo = "tmux-yank"; - rev = "648005db64d9bf3c4650eff694ecb6cf3e42b0c8"; - sha256 = "1zg9k8yk1iw01vl8m44w4sv20lln4l0lq9dafc09lxmgxm9dllj4"; + rev = "1b1a436e19f095ae8f825243dbe29800a8acd25c"; + sha256 = "hRvkBf+YrWycecnDixAsD4CAHg3KsioomfJ/nLl5Zgs="; }; }; } diff --git a/third_party/nixpkgs/pkgs/misc/uboot/default.nix b/third_party/nixpkgs/pkgs/misc/uboot/default.nix index cd40190712..3d7e9e48eb 100644 --- a/third_party/nixpkgs/pkgs/misc/uboot/default.nix +++ b/third_party/nixpkgs/pkgs/misc/uboot/default.nix @@ -88,6 +88,11 @@ let mkdir -p ${installDir} cp ${lib.concatStringsSep " " filesToInstall} ${installDir} + mkdir -p "$out/nix-support" + ${lib.concatMapStrings (file: '' + echo "file binary-dist ${installDir}/${builtins.baseNameOf file}" >> "$out/nix-support/hydra-build-products" + '') filesToInstall} + runHook postInstall ''; diff --git a/third_party/nixpkgs/pkgs/misc/vim-plugins/generated.nix b/third_party/nixpkgs/pkgs/misc/vim-plugins/generated.nix index 842b2600bd..a004c77af4 100644 --- a/third_party/nixpkgs/pkgs/misc/vim-plugins/generated.nix +++ b/third_party/nixpkgs/pkgs/misc/vim-plugins/generated.nix @@ -65,12 +65,12 @@ final: prev: ale = buildVimPluginFrom2Nix { pname = "ale"; - version = "2021-05-27"; + version = "2021-06-22"; src = fetchFromGitHub { owner = "dense-analysis"; repo = "ale"; - rev = "1b08791228f5aca4545a3fba6699b29a003028fe"; - sha256 = "07fmvg4hcri98zxnyjab2inzaapqc2w08rzdkspcgrhibqvp53jk"; + rev = "a4ba421803d030a8967ede111ce921d439aa5fbb"; + sha256 = "115n81dssyxsi3hlrfbga2w2vkyshf3jiy8m27pafl4adp7n3yqf"; }; meta.homepage = "https://github.com/dense-analysis/ale/"; }; @@ -185,12 +185,12 @@ final: prev: aurora = buildVimPluginFrom2Nix { pname = "aurora"; - version = "2021-06-03"; + version = "2021-06-06"; src = fetchFromGitHub { owner = "ray-x"; repo = "aurora"; - rev = "8d5601629f123e9553688a6705a1490ee8be9a1c"; - sha256 = "0i2nyk46yvr59hxwc99iaa0zdy0xcnaa1z1q93xf85i2pdyjg99b"; + rev = "6a77e8ecf38b0e7a547df58f499cecc1c50cd444"; + sha256 = "1yh88v6p1ingwydzr40jcva9gw58ihmgjndaf7h3sp0ldvl75ci2"; }; meta.homepage = "https://github.com/ray-x/aurora/"; }; @@ -221,12 +221,12 @@ final: prev: auto-session = buildVimPluginFrom2Nix { pname = "auto-session"; - version = "2021-06-01"; + version = "2021-06-17"; src = fetchFromGitHub { owner = "rmagatti"; repo = "auto-session"; - rev = "80ddcf26eca11cf4d48a52ffec094fe5a4711f32"; - sha256 = "0kh6a5hm0ppsbfpp7yhr2k4v36mj203q59wy15sgajx08ww0jj3m"; + rev = "99e9370291857c74d9aa7b4a91553ab838c28d95"; + sha256 = "0wckm7829f5gmcjvbh5rfbig5724k3wlb2xbn06k1hcbnv76pyvh"; }; meta.homepage = "https://github.com/rmagatti/auto-session/"; }; @@ -269,12 +269,12 @@ final: prev: barbar-nvim = buildVimPluginFrom2Nix { pname = "barbar-nvim"; - version = "2021-06-03"; + version = "2021-06-12"; src = fetchFromGitHub { owner = "romgrk"; repo = "barbar.nvim"; - rev = "23b6f64c9523522dd185482c856de492476a760c"; - sha256 = "1ijm4w4nqa037vjpjgjizhzrnpj10hwjc93lhzq29qs3cx85df1q"; + rev = "33639e53d0bf69444275ed048c5bfd7e29396634"; + sha256 = "0zqc4j0nbdhap8a67529n2k4k53xnqxrjsn2a4sdqdwvm207y6r9"; }; meta.homepage = "https://github.com/romgrk/barbar.nvim/"; }; @@ -413,12 +413,12 @@ final: prev: chadtree = buildVimPluginFrom2Nix { pname = "chadtree"; - version = "2021-06-05"; + version = "2021-06-27"; src = fetchFromGitHub { owner = "ms-jpq"; repo = "chadtree"; - rev = "a33387ffed163f922d93f142a908adfda521a224"; - sha256 = "1gs06vs1bgjr76hg1pdkxsd81c12fnaqg8r1lfvwcvph1nzqj7d9"; + rev = "9bac6b4623c8b24615bc1f0cfb582e1a8578060f"; + sha256 = "0f0birbvd4s28bqb6jp8pc8r24f4k5789gqqg7mwgrf06zhsa8dh"; }; meta.homepage = "https://github.com/ms-jpq/chadtree/"; }; @@ -449,12 +449,12 @@ final: prev: ci_dark = buildVimPluginFrom2Nix { pname = "ci_dark"; - version = "2021-06-04"; + version = "2021-06-20"; src = fetchFromGitHub { owner = "yunlingz"; repo = "ci_dark"; - rev = "d50cd0c60ecdaffb779d2acb7ce2bb94df1ed867"; - sha256 = "0pqpvqas1z173c2ngka787d9gp49ai3x85haingkxvir3bf0nbqm"; + rev = "8ff6b42196ccb1f84b781a8ccb10bc117ad58e88"; + sha256 = "0ym3sg6vd0jwqq33dx5vfblhf0hjis9zfp0fcsn4iyiq0rf7jphz"; }; meta.homepage = "https://github.com/yunlingz/ci_dark/"; }; @@ -509,24 +509,24 @@ final: prev: coc-fzf = buildVimPluginFrom2Nix { pname = "coc-fzf"; - version = "2021-05-29"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "antoinemadec"; repo = "coc-fzf"; - rev = "1be2273dc37c07b98b7a1b2b67fd57c80feb85a9"; - sha256 = "06w052x13idb8wfvyasg36hakffxnzfs7paj3wk83qa2m1kiz1n4"; + rev = "5b133aaa8c15f1c6fa831713892efd87189b0637"; + sha256 = "18cb39d113z8yxriidc0dmkkkzpp6x5hl414n5fcqwhjk5h514rn"; }; meta.homepage = "https://github.com/antoinemadec/coc-fzf/"; }; coc-lua = buildVimPluginFrom2Nix { pname = "coc-lua"; - version = "2021-05-08"; + version = "2021-06-22"; src = fetchFromGitHub { owner = "josa42"; repo = "coc-lua"; - rev = "02cd0ca0fa06712b7609b87c50e5e05998b3a771"; - sha256 = "093dcv4hzxxz2ygawjka08j4s7akygh2fldn4mfzrxjyjpxqal0c"; + rev = "dcf506e0cd37bf4929f23bb1faae779895811ea8"; + sha256 = "113p982rm8jp3krxyszmr6zyp586xyyinxqmhfjf14h0v515kklh"; }; meta.homepage = "https://github.com/josa42/coc-lua/"; }; @@ -557,12 +557,12 @@ final: prev: coc-nvim = buildVimPluginFrom2Nix { pname = "coc-nvim"; - version = "2021-06-04"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc.nvim"; - rev = "06d950e547e8fa1a775399ae5eeb70603084b109"; - sha256 = "1fj8v8zm0w04fyxf12ck4lc3gwq6bxh5shmwc24j0sar3ki0i4rz"; + rev = "91b144b090311c29e40832e76ec8624e5e3599b0"; + sha256 = "0cwhzk9lkwj0mndjmxny1y5hps0qgmib50flkvlvhl39j6zbrixx"; }; meta.homepage = "https://github.com/neoclide/coc.nvim/"; }; @@ -617,12 +617,12 @@ final: prev: command-t = buildVimPluginFrom2Nix { pname = "command-t"; - version = "2021-03-14"; + version = "2021-06-07"; src = fetchFromGitHub { owner = "wincent"; repo = "command-t"; - rev = "a7ce436b211a7ac1f47cfd440370653e33c2a1d5"; - sha256 = "1yfcbh9q35w1ckdv8isbwjwlgnjnjmqm8yc7bcbfirkx9pjlsw2z"; + rev = "6a00a2cabfb5ee3f49ff556ceea56892825c0397"; + sha256 = "0z2zr2mfc5m4xn8b0j0br7q96hs42md5wd53viv0zmw67i2pnbcs"; fetchSubmodules = true; }; meta.homepage = "https://github.com/wincent/command-t/"; @@ -714,12 +714,12 @@ final: prev: completion-nvim = buildVimPluginFrom2Nix { pname = "completion-nvim"; - version = "2021-06-01"; + version = "2021-06-16"; src = fetchFromGitHub { owner = "nvim-lua"; repo = "completion-nvim"; - rev = "c8db953a8e9f4bc8183e31831297cf84d6f521b8"; - sha256 = "0p35msrh7g100ayl0g8285q43v20n6hlv1grdb0rmw8sil0j881a"; + rev = "d62fff879b29fa1ce915887a75305af0fff57d32"; + sha256 = "0hfsz06djyja8phj099fmbg2sa9jj89rqxvizwhwdxadshmr1f20"; }; meta.homepage = "https://github.com/nvim-lua/completion-nvim/"; }; @@ -774,12 +774,12 @@ final: prev: conjure = buildVimPluginFrom2Nix { pname = "conjure"; - version = "2021-05-31"; + version = "2021-06-13"; src = fetchFromGitHub { owner = "Olical"; repo = "conjure"; - rev = "31820e386ce7a32488ad6b19033c17a8f05c36bf"; - sha256 = "1p35blgnd99kggwyiag6drx3v6zqx50ypxnfvvij102ws50144fk"; + rev = "b55e4906a10db0f6917058aec6616075c4d06994"; + sha256 = "0agmfahppcaxxn3kwfg9wx9ncdz51qixqh52xw6rddhpda5h7gfm"; }; meta.homepage = "https://github.com/Olical/conjure/"; }; @@ -810,12 +810,12 @@ final: prev: Coqtail = buildVimPluginFrom2Nix { pname = "Coqtail"; - version = "2021-06-01"; + version = "2021-06-21"; src = fetchFromGitHub { owner = "whonore"; repo = "Coqtail"; - rev = "5f92ee08b9c0018df244de47dc6e2ed4ba232a64"; - sha256 = "16xfkblsn149v9rgqjcimaw380xv6l8gimfaj368gh9h2icaz9qc"; + rev = "aa817559be68d9e90316bc7e5d3205fe2ffcffbe"; + sha256 = "06c9ab58rj0qx2nyl63qpx5r8lwlx320j7913nafpk268pmqdz4i"; }; meta.homepage = "https://github.com/whonore/Coqtail/"; }; @@ -966,12 +966,12 @@ final: prev: defx-nvim = buildVimPluginFrom2Nix { pname = "defx-nvim"; - version = "2021-06-05"; + version = "2021-06-23"; src = fetchFromGitHub { owner = "Shougo"; repo = "defx.nvim"; - rev = "27890150286f62d9c2fcb624f6f3bd1fd45c7f3c"; - sha256 = "0fvwdjqiqwhaxwkrnzfai0ay4sksr4ma4akhzqnfqd0blbhc4x2i"; + rev = "b3353d8bc1f14553e18c68332dc65418977698d1"; + sha256 = "0cydx3qv217k72rvn3gx3wb3dv5y6bf4zgggz8s84w9kn451swxn"; }; meta.homepage = "https://github.com/Shougo/defx.nvim/"; }; @@ -1014,24 +1014,24 @@ final: prev: denite-nvim = buildVimPluginFrom2Nix { pname = "denite-nvim"; - version = "2021-06-05"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "Shougo"; repo = "denite.nvim"; - rev = "70ca378f399be626020e2994f9604eae35c232a6"; - sha256 = "0njjwa2ixqm792chvkq91fb7dadaf05kws727w1q9r5sp8k000sr"; + rev = "cfee6f43aaead875bdc5351627e344698064108c"; + sha256 = "1yciacr1fh5d155b5d2an4hjy8h0kdp94qrkp9vdi4a46ljrcy9s"; }; meta.homepage = "https://github.com/Shougo/denite.nvim/"; }; deol-nvim = buildVimPluginFrom2Nix { pname = "deol-nvim"; - version = "2021-06-05"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "Shougo"; repo = "deol.nvim"; - rev = "5d4ca0cab361962a58db6f4a3ad06b00348b743d"; - sha256 = "04ja8ps0vmvg5aggr6lr4qb4pv46hi86x8zw8mwrzav04z8fhxcw"; + rev = "8e535d2c19b5307196de736ff9ceadcfe2de9a96"; + sha256 = "09xfikgrj4krlqnf6j26yhaiiv7im0sm4h0q049m927sh248kxh7"; }; meta.homepage = "https://github.com/Shougo/deol.nvim/"; }; @@ -1160,12 +1160,12 @@ final: prev: deoplete-lsp = buildVimPluginFrom2Nix { pname = "deoplete-lsp"; - version = "2021-05-23"; + version = "2021-06-16"; src = fetchFromGitHub { owner = "deoplete-plugins"; repo = "deoplete-lsp"; - rev = "00937dd6e4270287c34cdd7f64e8dad5d16914aa"; - sha256 = "0fzp5zvwb85nx9nw1f2im1qllz7ihblgi8xi9mski19p40pgay3j"; + rev = "1a9476dd83d986c861233c380ac07e1e2f2d10af"; + sha256 = "0xv34cg0lkcjhylsc5qc2pkd4np5mmf5gbx55hvryjnipk1sa06y"; }; meta.homepage = "https://github.com/deoplete-plugins/deoplete-lsp/"; }; @@ -1256,12 +1256,12 @@ final: prev: deoplete-nvim = buildVimPluginFrom2Nix { pname = "deoplete-nvim"; - version = "2021-06-05"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "Shougo"; repo = "deoplete.nvim"; - rev = "e9bd32d18430ee2c95b154d90533affc3ca6f62b"; - sha256 = "0g5ssg6363552fx7y74hl5wbmpmdz6z7y98jwa5y3dkq3xqh6ykn"; + rev = "a25b3262f7b5ec7e7188560202b680b2763a8359"; + sha256 = "0q9cc641x0jwdvd51dwm3grmgj9y9lhlgz5zpgnwwwbx894i55sn"; }; meta.homepage = "https://github.com/Shougo/deoplete.nvim/"; }; @@ -1280,12 +1280,12 @@ final: prev: dhall-vim = buildVimPluginFrom2Nix { pname = "dhall-vim"; - version = "2020-08-19"; + version = "2021-06-05"; src = fetchFromGitHub { owner = "vmchale"; repo = "dhall-vim"; - rev = "77d1c165bcbe6bb7f9eedbeafe390c2107d3c52e"; - sha256 = "03x55x0gvf7n4i8hh6s5453mf5h43pf7kdy817q6w1149bd90vxy"; + rev = "68500ef46ff3706f46c99db3be7a0c8abcf6a3ae"; + sha256 = "0lwna4kcq7davfvh3535n8wl9jxkjm7cg6jgpisd17kvagihh8qw"; }; meta.homepage = "https://github.com/vmchale/dhall-vim/"; }; @@ -1304,12 +1304,12 @@ final: prev: diffview-nvim = buildVimPluginFrom2Nix { pname = "diffview-nvim"; - version = "2021-06-03"; + version = "2021-06-15"; src = fetchFromGitHub { owner = "sindrets"; repo = "diffview.nvim"; - rev = "e174aa0a1e8a65fd9699f190c67fd197c2afa09f"; - sha256 = "0skzir27vzg5h8w0c7hj2p2i0540m768i1vbgqwpgz7y7wkgpbcm"; + rev = "f06495b12ba47460c61e8ad1388326e3f94e5637"; + sha256 = "0lxv2c8wa0a6nknw2vfms9fzgjrmjk8klavhs8ay1qcgzis9s1iq"; }; meta.homepage = "https://github.com/sindrets/diffview.nvim/"; }; @@ -1364,12 +1364,12 @@ final: prev: edge = buildVimPluginFrom2Nix { pname = "edge"; - version = "2021-05-22"; + version = "2021-06-17"; src = fetchFromGitHub { owner = "sainnhe"; repo = "edge"; - rev = "af858776b6faf81b9eb50f8bbb87c639ee483c93"; - sha256 = "07smppxp2wr4282vsz0zdx3kkhvrx9f5140dwx4h4p8chs1c1zc5"; + rev = "f4a26c075f603c3d82baf56b04c9168a7e084c8b"; + sha256 = "02rsawnqixwq8cj8ryqg0nmmmzq5s1adfll9mmwa6bqh3nwxsb2s"; }; meta.homepage = "https://github.com/sainnhe/edge/"; }; @@ -1462,12 +1462,12 @@ final: prev: falcon = buildVimPluginFrom2Nix { pname = "falcon"; - version = "2021-04-14"; + version = "2021-06-11"; src = fetchFromGitHub { owner = "fenetikm"; repo = "falcon"; - rev = "376aacc4ec6dd5495f201bc5bea0c1bcff574535"; - sha256 = "1y3r36594f6vhgi0gzszl9pf1d7jizxj6iamcpwmbqbj75i62hp3"; + rev = "0893abf44cd6dda4d50e98c4ab1f9aea8e61d617"; + sha256 = "12fa2kwg2495qhs845g31a9iszlrry4jc19famgpjg1glgm9lkrm"; }; meta.homepage = "https://github.com/fenetikm/falcon/"; }; @@ -1522,12 +1522,12 @@ final: prev: ferret = buildVimPluginFrom2Nix { pname = "ferret"; - version = "2020-12-08"; + version = "2021-06-12"; src = fetchFromGitHub { owner = "wincent"; repo = "ferret"; - rev = "fbcd9de1e88391d8a1ab39adb520d6a5ac29792f"; - sha256 = "068v0gj7vn3halj0mcjfnziklqcssyln61ip5zalnw7x6vm3yblk"; + rev = "ce27366ab52ef27a2307836e586b9b9c54a00ae5"; + sha256 = "1j69gd5j7bml6a8gaa8skp3z0145372pnqmqq8hfn7gvncql6l97"; }; meta.homepage = "https://github.com/wincent/ferret/"; }; @@ -1593,6 +1593,18 @@ final: prev: meta.homepage = "https://github.com/floobits/floobits-neovim/"; }; + formatter-nvim = buildVimPluginFrom2Nix { + pname = "formatter-nvim"; + version = "2021-06-07"; + src = fetchFromGitHub { + owner = "mhartington"; + repo = "formatter.nvim"; + rev = "fc5757d6c9099125edba64b86cb5c9afac9b833b"; + sha256 = "170lcd7qwzckxib98clld0hgydkjvrr86md3b035q7higgad386m"; + }; + meta.homepage = "https://github.com/mhartington/formatter.nvim/"; + }; + forms = buildVimPluginFrom2Nix { pname = "forms"; version = "2012-11-28"; @@ -1607,12 +1619,12 @@ final: prev: friendly-snippets = buildVimPluginFrom2Nix { pname = "friendly-snippets"; - version = "2021-05-28"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "rafamadriz"; repo = "friendly-snippets"; - rev = "496ccb632e1dd66ab4561304faa431125c0bf0de"; - sha256 = "1rbgji9x0bf8l7kqph77nfnpipy4d1863ml3wx75404q43nld7w8"; + rev = "3dca3fc854b72a72233341f4ae51cebd7a864234"; + sha256 = "1saasvazmxq5ll0fna0a8kx5q8lq9mg0ldkj1k4g13h9g34sdwgg"; }; meta.homepage = "https://github.com/rafamadriz/friendly-snippets/"; }; @@ -1655,12 +1667,12 @@ final: prev: fzf-lsp-nvim = buildVimPluginFrom2Nix { pname = "fzf-lsp-nvim"; - version = "2021-05-25"; + version = "2021-06-20"; src = fetchFromGitHub { owner = "gfanto"; repo = "fzf-lsp.nvim"; - rev = "fdbe8e8f447870c8693d81045031fc1d5812e38e"; - sha256 = "0rygh4dxrvz7cqsjvp7ymim24hv2czamb9jn1qbbaj33vn85403b"; + rev = "6683718524adec3ce58c848706bcc7f3aa6a09a1"; + sha256 = "12ccd7yf726s1gfcxhv7fnwfgwlkgvkqnds442k4i2m9ahs0pyj7"; }; meta.homepage = "https://github.com/gfanto/fzf-lsp.nvim/"; }; @@ -1739,36 +1751,36 @@ final: prev: gina-vim = buildVimPluginFrom2Nix { pname = "gina-vim"; - version = "2021-04-28"; + version = "2021-06-12"; src = fetchFromGitHub { owner = "lambdalisue"; repo = "gina.vim"; - rev = "699d1e9d4104c994a37cb18b730f38ff7f32f2d1"; - sha256 = "1akcpf5iyrbj4apjvp02613x328igp9gk4gaqgkx4qvwha4khbi5"; + rev = "abdbe0fe33f3b6fc59e94f7cc3072768f8dfd8ac"; + sha256 = "1f3shh6jxr5i1an2dbb1vmc0l2xg03fm6ava25ahxg4b5ka59bc5"; }; meta.homepage = "https://github.com/lambdalisue/gina.vim/"; }; git-blame-nvim = buildVimPluginFrom2Nix { pname = "git-blame-nvim"; - version = "2021-04-15"; + version = "2021-06-14"; src = fetchFromGitHub { owner = "f-person"; repo = "git-blame.nvim"; - rev = "bba913f065b7fba7150e71dc07e093c758c5ca98"; - sha256 = "1xvy5pnqcrvcs19b2b6l3n9rkj281grcgbrsg87iwvc9sw98bywl"; + rev = "125f09f3e09091fa9cc6585156e199d08989dc0e"; + sha256 = "1d6al5yrwv0wfmy39k8ky5ha1x0a6mz6djscibwz13fvgqka2730"; }; meta.homepage = "https://github.com/f-person/git-blame.nvim/"; }; git-messenger-vim = buildVimPluginFrom2Nix { pname = "git-messenger-vim"; - version = "2021-05-14"; + version = "2021-06-06"; src = fetchFromGitHub { owner = "rhysd"; repo = "git-messenger.vim"; - rev = "2a26734c6322449a56d02c25a2947e9b7519ca49"; - sha256 = "0ib0yl7zqklj9i1sgv854d3xl5sqbdf2khh9cpraik1rv23nlf2h"; + rev = "f17e40e9995bbb21e0e9b7fd29278637a69fcc02"; + sha256 = "09izgdlba3413llb698r8iagpfnhvp57yaz7qlcypbyvqr9l41mm"; }; meta.homepage = "https://github.com/rhysd/git-messenger.vim/"; }; @@ -1799,12 +1811,12 @@ final: prev: gitsigns-nvim = buildVimPluginFrom2Nix { pname = "gitsigns-nvim"; - version = "2021-06-02"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "lewis6991"; repo = "gitsigns.nvim"; - rev = "4e3e2626af9573758a4e8c0d463ff3b733d40644"; - sha256 = "01cr2a6xqzazyapkdlqjbxswsm9y7hnwl3bs7wcp23dwlpdvxc89"; + rev = "521e9357bdbd2cadf4863d5c67f2e816182bdecf"; + sha256 = "1cd11gvbw2rs5vg6n5w7g22n8c46prsfd906ycld30zq5sm85fg5"; }; meta.homepage = "https://github.com/lewis6991/gitsigns.nvim/"; }; @@ -1821,6 +1833,18 @@ final: prev: meta.homepage = "https://github.com/gregsexton/gitv/"; }; + gleam-vim = buildVimPluginFrom2Nix { + pname = "gleam-vim"; + version = "2020-06-24"; + src = fetchFromGitHub { + owner = "gleam-lang"; + repo = "gleam.vim"; + rev = "847a5ef57c2faef2774242c87f711d1131b89fe6"; + sha256 = "17kjby64zdnmhyia1cx9jnk4mss0gca1jz1m4hff9rl63i56bql1"; + }; + meta.homepage = "https://github.com/gleam-lang/gleam.vim/"; + }; + glow-nvim = buildVimPluginFrom2Nix { pname = "glow-nvim"; version = "2021-05-29"; @@ -1895,24 +1919,24 @@ final: prev: gruvbox-flat-nvim = buildVimPluginFrom2Nix { pname = "gruvbox-flat-nvim"; - version = "2021-05-28"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "eddyekofo94"; repo = "gruvbox-flat.nvim"; - rev = "521d9234d1c8c3a0e9dc782a8f2e5776483856b0"; - sha256 = "1k92z847ix3c7kwiyiw4x41z2sid2wyyjgv08myh93k0ivb5y4qh"; + rev = "b98cd51a564881eac30794e64a8db63860d9bcf0"; + sha256 = "03drq3sqak2lcb7vs7qw1lhgrbnri0m1qp50cgaq17v0dlk15n4k"; }; meta.homepage = "https://github.com/eddyekofo94/gruvbox-flat.nvim/"; }; gruvbox-nvim = buildVimPluginFrom2Nix { pname = "gruvbox-nvim"; - version = "2021-06-05"; + version = "2021-06-07"; src = fetchFromGitHub { owner = "npxbr"; repo = "gruvbox.nvim"; - rev = "ad076d46c76b884d7b555067d3434b3666c3b80b"; - sha256 = "0m4ks6gxh3clg4vg1rxyvhjjkmmwipb9s38zwbaidfqwifldjriy"; + rev = "2dc25bb14fbd69f888dd0615c5576dd730de869a"; + sha256 = "1i87f7vfgk1szy18cg7nng2yqvcny4v1wnh4dbw74lcqmmazgi7y"; }; meta.homepage = "https://github.com/npxbr/gruvbox.nvim/"; }; @@ -1991,12 +2015,12 @@ final: prev: hologram-nvim = buildVimPluginFrom2Nix { pname = "hologram-nvim"; - version = "2021-05-21"; + version = "2021-06-14"; src = fetchFromGitHub { owner = "edluffy"; repo = "hologram.nvim"; - rev = "593a458d04f7457669280373d98e41195c106d13"; - sha256 = "0diq42zdr9l8qw198c5y4jy5siab3cwh4ncsb5z111m28n6a6i5c"; + rev = "d8300f996fde96fc37c02b89f70642c1c44057a3"; + sha256 = "0g9i5mgd69kgkl27my1xnyd3yf77c8313ikbhm7cn6i6iqml1blf"; }; meta.homepage = "https://github.com/edluffy/hologram.nvim/"; }; @@ -2015,24 +2039,24 @@ final: prev: hop-nvim = buildVimPluginFrom2Nix { pname = "hop-nvim"; - version = "2021-06-02"; + version = "2021-06-23"; src = fetchFromGitHub { owner = "phaazon"; repo = "hop.nvim"; - rev = "56727073356756a86c4b1be95d7c565e4ab1f11e"; - sha256 = "00ch6mhcxvqk7kshmi6rfm0n1wna47v5kcxjxwhndm79liq3h91b"; + rev = "a6cd8df18dc2f667e2d10b5fea79d73a7d084cd7"; + sha256 = "1j5l012vxrcqs5x4ry8cfpvz3a289xsr6h969avd4b8ic8w7dkwb"; }; meta.homepage = "https://github.com/phaazon/hop.nvim/"; }; i3config-vim = buildVimPluginFrom2Nix { pname = "i3config-vim"; - version = "2020-03-28"; + version = "2021-06-23"; src = fetchFromGitHub { owner = "mboughaba"; repo = "i3config.vim"; - rev = "c3fe1a901392ee11721e08d2a0d2886a7f8b8e83"; - sha256 = "1cygyn7p0x2smqsjxly5xbsdnrjnq5kj1a0a8qg356j0l112j7z2"; + rev = "5c753c56c033d3b17e5005a67cdb9653bbb88ba7"; + sha256 = "0i9w094sqlq85kfwajhaangfwdp81fbwk42n72wfxypjjhw8shv8"; }; meta.homepage = "https://github.com/mboughaba/i3config.vim/"; }; @@ -2123,24 +2147,24 @@ final: prev: indent-blankline-nvim-lua = buildVimPluginFrom2Nix { pname = "indent-blankline-nvim-lua"; - version = "2021-04-28"; + version = "2021-06-23"; src = fetchFromGitHub { owner = "lukas-reineke"; repo = "indent-blankline.nvim"; - rev = "ec5816267caa5fdde7a5e5a8359b9b19bc8ecf49"; - sha256 = "008q3rg6fz36k334ci30f1vci9hws4y04z8gr4wnq9q8qx57y7nh"; + rev = "f314659a68f936bf65502fe318222facbeb439a5"; + sha256 = "0mzkkacdcbxdvaxjfwyiphlwa1z7f5809y03mhyl7656lan8vk90"; }; meta.homepage = "https://github.com/lukas-reineke/indent-blankline.nvim/"; }; indent-blankline-nvim = buildVimPluginFrom2Nix { pname = "indent-blankline-nvim"; - version = "2021-03-06"; + version = "2021-06-10"; src = fetchFromGitHub { owner = "lukas-reineke"; repo = "indent-blankline.nvim"; - rev = "47691a67b690ad6ebd9df67574691822d226a5b6"; - sha256 = "0lkw6mslkd0gax0s280icpa5saq3320kkkmjih04mmnnf1vnwq6a"; + rev = "5d5d2f80ec48e3f5fe7237ec17cd1587f39d3be7"; + sha256 = "005nv99jw9ricgy1xyxixl1ssyh7jai9kv7cx95g5igfvvpblz7k"; }; meta.homepage = "https://github.com/lukas-reineke/indent-blankline.nvim/"; }; @@ -2231,12 +2255,12 @@ final: prev: jedi-vim = buildVimPluginFrom2Nix { pname = "jedi-vim"; - version = "2021-03-17"; + version = "2021-06-22"; src = fetchFromGitHub { owner = "davidhalter"; repo = "jedi-vim"; - rev = "8763462331600951f2d9e729c4d8e26b6049c804"; - sha256 = "0rfrqsgpy501k0cy01br2rrlrsxls73yrhfhnsiafdi3dw6x9anj"; + rev = "7ac81cb88059d3daaf2d654cbb5cd03d23a60d33"; + sha256 = "0ydgj222i0ilbb4nhv988r2yrfhq7m29c32nardb7mw79y9a08i7"; fetchSubmodules = true; }; meta.homepage = "https://github.com/davidhalter/jedi-vim/"; @@ -2292,12 +2316,12 @@ final: prev: julia-vim = buildVimPluginFrom2Nix { pname = "julia-vim"; - version = "2021-05-20"; + version = "2021-06-17"; src = fetchFromGitHub { owner = "JuliaEditorSupport"; repo = "julia-vim"; - rev = "2f35033a2141eea7a5a89ef8be438985781a9fcf"; - sha256 = "1d7xl7i5xl4mnpx7bl9cnf23x48lc6ambhgb98phzdsb0kzjhv3n"; + rev = "c3c35958e56993337d6517cf5d6e974aca1da99f"; + sha256 = "0qlx267mpyphpxzfr6y0x87hkxisfmsivd2617sbbwxkv05z2kw1"; }; meta.homepage = "https://github.com/JuliaEditorSupport/julia-vim/"; }; @@ -2388,24 +2412,24 @@ final: prev: LeaderF = buildVimPluginFrom2Nix { pname = "LeaderF"; - version = "2021-06-03"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "Yggdroot"; repo = "LeaderF"; - rev = "3849b6440299215e5168d569713d2a5540dfbf2b"; - sha256 = "17if75p3x4lkqncl296f3jdq0rcc69b0mgj0dbz6cl851bmqvy40"; + rev = "3899965851a0b3e59998f2b42e716eeee6bcc473"; + sha256 = "1w89nlkl35yzadbnhxv0c7qcwzynhvv1kqhvwpbj5h4x2gnb9x33"; }; meta.homepage = "https://github.com/Yggdroot/LeaderF/"; }; lean-vim = buildVimPluginFrom2Nix { pname = "lean-vim"; - version = "2021-06-04"; + version = "2021-06-07"; src = fetchFromGitHub { owner = "leanprover"; repo = "lean.vim"; - rev = "fdf448398335434f4b5c45aff5f4ee64a3d090fa"; - sha256 = "0wi7837yy4x89w6gw72qkaxbb0vdm3hlxnkjplg2g4ibpayxx3s4"; + rev = "48ac5798b74b8ef8212adc70048ff0ed6f4e1976"; + sha256 = "08n8zfglml4v983nnm8gg25vggg5cfjsqrm96k8s3j5wmzi95mhx"; }; meta.homepage = "https://github.com/leanprover/lean.vim/"; }; @@ -2484,28 +2508,40 @@ final: prev: lightline-ale = buildVimPluginFrom2Nix { pname = "lightline-ale"; - version = "2021-05-04"; + version = "2021-06-09"; src = fetchFromGitHub { owner = "maximbaz"; repo = "lightline-ale"; - rev = "98a7417ff66829b1d14cb9e4e7aa6a1a0ef25103"; - sha256 = "1ripdl58pcmylgzzj92v8myjjw22h1g9g6drld9ng1qcg1zn2br8"; + rev = "a861f691ac7e40b1b359bc7a147078fa1e0570ce"; + sha256 = "0bi3pghcjdpbrp235bhkgqrsyfr1m6v40krxfb2qbc1yy9plbs9q"; }; meta.homepage = "https://github.com/maximbaz/lightline-ale/"; }; lightline-bufferline = buildVimPluginFrom2Nix { pname = "lightline-bufferline"; - version = "2021-04-16"; + version = "2021-06-09"; src = fetchFromGitHub { owner = "mengelbrecht"; repo = "lightline-bufferline"; - rev = "570e732e9e89f2a900a1e86fb3fa170c7dd201d6"; - sha256 = "0jvd7jp92qffas5hb2m6jg1vlm4g2is8q8hkj5mhyr5gnbpj2xf0"; + rev = "ce6b2e1e09654af34a80af774879eac4708cc11e"; + sha256 = "0cv5845d1gg9mv5pcp8c9afydvgihgfyk7ibjr3fgkqacwcfzjmy"; }; meta.homepage = "https://github.com/mengelbrecht/lightline-bufferline/"; }; + lightline-gruvbox-vim = buildVimPluginFrom2Nix { + pname = "lightline-gruvbox-vim"; + version = "2018-03-23"; + src = fetchFromGitHub { + owner = "shinchu"; + repo = "lightline-gruvbox.vim"; + rev = "21659af1fc980ebe7de0f475e57c3fda9a82c2d3"; + sha256 = "0h9br1r5vbrx5cplnk34xlg1kagasj3zn18f8d4ifi0pibyq6pm1"; + }; + meta.homepage = "https://github.com/shinchu/lightline-gruvbox.vim/"; + }; + lightline-vim = buildVimPluginFrom2Nix { pname = "lightline-vim"; version = "2021-05-30"; @@ -2518,6 +2554,18 @@ final: prev: meta.homepage = "https://github.com/itchyny/lightline.vim/"; }; + lightspeed-nvim = buildVimPluginFrom2Nix { + pname = "lightspeed-nvim"; + version = "2021-06-26"; + src = fetchFromGitHub { + owner = "ggandor"; + repo = "lightspeed.nvim"; + rev = "1a213ae1a9587afd4083309098b3a3e63cf6ea80"; + sha256 = "053drg668sbp0q7xfjm9cx29d87brf02xn86ind81vd039csjd7z"; + }; + meta.homepage = "https://github.com/ggandor/lightspeed.nvim/"; + }; + limelight-vim = buildVimPluginFrom2Nix { pname = "limelight-vim"; version = "2020-10-13"; @@ -2568,24 +2616,24 @@ final: prev: lsp_extensions-nvim = buildVimPluginFrom2Nix { pname = "lsp_extensions-nvim"; - version = "2021-02-17"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "nvim-lua"; repo = "lsp_extensions.nvim"; - rev = "ce5d03822fda9ddbdeb2461e5b4c06c1641fe7ea"; - sha256 = "1gybxaxgbq1s1ijvrl9h9nq443cyrdnhgi1yjqxzrr64wz7nr8v0"; + rev = "a1f12b8df1d3d8e46a7010615d2a335cd06814f2"; + sha256 = "11aynapcxxm4xjicixj0g93y7qqlhby8zvmc856gq0b14k5n291q"; }; meta.homepage = "https://github.com/nvim-lua/lsp_extensions.nvim/"; }; lsp_signature-nvim = buildVimPluginFrom2Nix { pname = "lsp_signature-nvim"; - version = "2021-06-03"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "ray-x"; repo = "lsp_signature.nvim"; - rev = "5aca93b10b571a8dfafd2c9e850239dfa2094a6f"; - sha256 = "1k8k7zq03jnvh4328i0s0d87g9s5y2yc94wnpg059clmp1cizcq4"; + rev = "69142caa4e48a265467d1c43112de0790f0e5090"; + sha256 = "0m69fdblnxydlix5cx1rnrcyxsfvl85ica2vn0d58vpls20hnibd"; }; meta.homepage = "https://github.com/ray-x/lsp_signature.nvim/"; }; @@ -2626,6 +2674,18 @@ final: prev: meta.homepage = "https://github.com/hoob3rt/lualine.nvim/"; }; + luasnip = buildVimPluginFrom2Nix { + pname = "luasnip"; + version = "2021-06-26"; + src = fetchFromGitHub { + owner = "l3mon4d3"; + repo = "luasnip"; + rev = "8c96627d42aeb00b7595bb9fd812762ca4a27019"; + sha256 = "0cjphgly8y2gb5izwl670qy58ky6wjfw1qzarfkxi5wmbk1mawv9"; + }; + meta.homepage = "https://github.com/l3mon4d3/luasnip/"; + }; + lush-nvim = buildVimPluginFrom2Nix { pname = "lush-nvim"; version = "2021-06-01"; @@ -2712,12 +2772,12 @@ final: prev: minimap-vim = buildVimPluginFrom2Nix { pname = "minimap-vim"; - version = "2021-06-03"; + version = "2021-06-21"; src = fetchFromGitHub { owner = "wfxr"; repo = "minimap.vim"; - rev = "b2c27ca4b25dedef968f3e746533bb973b148c34"; - sha256 = "0wx1hk7ml4r49gdfqnww1002c5aw4dgndlrhwy8fhyvg8117902r"; + rev = "14f0a76ccb965bd935818039168cbb4df87f53e4"; + sha256 = "0cphjh7p8j4i2q89q4lisbs1ir017h1pphg95d4x5ds4ms4rnbjg"; }; meta.homepage = "https://github.com/wfxr/minimap.vim/"; }; @@ -3024,24 +3084,24 @@ final: prev: neoformat = buildVimPluginFrom2Nix { pname = "neoformat"; - version = "2021-04-20"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "sbdchd"; repo = "neoformat"; - rev = "1a49552cdaddeaaa766a6f0016effe530634b39f"; - sha256 = "114mp407vck6bm224mig91rka5k7jj6641lllijwj25b3yfkgkmr"; + rev = "cdf38b33fc4a78c5aa369b8074956a3ebf184f4b"; + sha256 = "1cp3p117ij5k2zsmyrg3c01n9hv2a6h5p09i2gllz88ii5x3965y"; }; meta.homepage = "https://github.com/sbdchd/neoformat/"; }; neogit = buildVimPluginFrom2Nix { pname = "neogit"; - version = "2021-06-03"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "TimUntersberger"; repo = "neogit"; - rev = "f0a22c4609e6f090afdcb147242a2e96ac763f4a"; - sha256 = "09y03krzg2wl0mlgvc3shvdbvjr8ga69amknbfzvnmplmqyji0g5"; + rev = "6bf4bfcf36e701658ddb062f1214e3942e339442"; + sha256 = "1wgchrv6piykzpwg42yl23qn1qxangf58cv97rj73m80ws8hhwb8"; }; meta.homepage = "https://github.com/TimUntersberger/neogit/"; }; @@ -3082,6 +3142,18 @@ final: prev: meta.homepage = "https://github.com/Shougo/neomru.vim/"; }; + neorg = buildVimPluginFrom2Nix { + pname = "neorg"; + version = "2021-06-26"; + src = fetchFromGitHub { + owner = "vhyrro"; + repo = "neorg"; + rev = "950ed23a61ba0b4bb455033f191f15b9b8170fd6"; + sha256 = "0c8zqkyjlkbz109k3321ys7jjggwk9w13p72907k64ypfmr70p30"; + }; + meta.homepage = "https://github.com/vhyrro/neorg/"; + }; + neosnippet-snippets = buildVimPluginFrom2Nix { pname = "neosnippet-snippets"; version = "2021-05-05"; @@ -3100,8 +3172,8 @@ final: prev: src = fetchFromGitHub { owner = "Shougo"; repo = "neosnippet.vim"; - rev = "5d65a8fde5c3f4dfc0dc1a13639515948d8a28a5"; - sha256 = "1iaapjpx91kcz9h2gp7vzgj7lnjs86g0iqkg3vgr04kj9lsvj3j7"; + rev = "d2e1e6b4c4e17cab2debd0353fed77b417b53237"; + sha256 = "0bwlcija1sbml5ni7mz4q97hhnl7hiqamzzvqw8qyp8aw2b0kj1q"; }; meta.homepage = "https://github.com/Shougo/neosnippet.vim/"; }; @@ -3132,12 +3204,12 @@ final: prev: neovim-fuzzy = buildVimPluginFrom2Nix { pname = "neovim-fuzzy"; - version = "2021-04-24"; + version = "2021-06-17"; src = fetchFromGitHub { owner = "cloudhead"; repo = "neovim-fuzzy"; - rev = "46f908aedef6af039c5134056ad008fe7aae1cbc"; - sha256 = "0mszwcvj61y9jqxc0vgghjl1x0xxvy7mqspmv3ikd8sglg54gz2d"; + rev = "0a65732a4a346384cb828a42014d2833dc301b99"; + sha256 = "133l6qyzsddmcwxmphbv49a3b0ksnmrbrf6lwacyld5id663yjkj"; }; meta.homepage = "https://github.com/cloudhead/neovim-fuzzy/"; }; @@ -3240,48 +3312,48 @@ final: prev: nlua-nvim = buildVimPluginFrom2Nix { pname = "nlua-nvim"; - version = "2021-04-22"; + version = "2021-06-15"; src = fetchFromGitHub { owner = "tjdevries"; repo = "nlua.nvim"; - rev = "31e3430acb84368c0933a3e765d834e897dfca2f"; - sha256 = "0h8908x2pf139q6mxckcglb5w7zxvhp0vj97za0g8343lvlhf0v1"; + rev = "a0722bd2f6fdf54f85aaf8dcd6a1032f64c83905"; + sha256 = "1j3350hs5dhbksi7wbzaq5p2268544virj0hj41bs5iv078pjj45"; }; meta.homepage = "https://github.com/tjdevries/nlua.nvim/"; }; nnn-vim = buildVimPluginFrom2Nix { pname = "nnn-vim"; - version = "2021-05-30"; + version = "2021-06-07"; src = fetchFromGitHub { owner = "mcchrish"; repo = "nnn.vim"; - rev = "fb80ed60c642b1f3666125c3051bd2da34453eeb"; - sha256 = "1p87dc296icb2kpyzlflpzbaq5z2yg106mpsxxzmwzn949smsk7l"; + rev = "abf700104c0450bac10be3ece613ff88997f47e4"; + sha256 = "0s3z5kd2h8cx6lplvg3yqp2pacx8c7kcavpvwnl71vmi0s2ld85s"; }; meta.homepage = "https://github.com/mcchrish/nnn.vim/"; }; nord-vim = buildVimPluginFrom2Nix { pname = "nord-vim"; - version = "2020-07-06"; + version = "2021-06-09"; src = fetchFromGitHub { owner = "arcticicestudio"; repo = "nord-vim"; - rev = "57dffa746907e8ce5c4b520146ed0d89d3c29a51"; - sha256 = "0xpz71rj74514789v6x9wrg95n8bsag8f5ygd7js40qrwpxq6b4j"; + rev = "537c66ca7c1308430b00dab41d9ad9c4201555f7"; + sha256 = "18v7xgag87czxnm2mvxg273z88gc8bh4jgzl1rh10y6kbbyv9c82"; }; meta.homepage = "https://github.com/arcticicestudio/nord-vim/"; }; nord-nvim = buildVimPluginFrom2Nix { pname = "nord-nvim"; - version = "2021-06-02"; + version = "2021-06-17"; src = fetchFromGitHub { owner = "shaunsingh"; repo = "nord.nvim"; - rev = "6965333869ca172a18606c93d6f6c1275fb9aabb"; - sha256 = "0nljk4ncxz5syf0wr29j3bdxdw5bjpjn879ls1r910hicn4lg468"; + rev = "cbede2d4abef3f6054919863404ce46f3ed572a9"; + sha256 = "0w7fv6yl78inr81h57kgh5xfhha626sc2w8mmzgbwp7s7yhqxymk"; }; meta.homepage = "https://github.com/shaunsingh/nord.nvim/"; }; @@ -3300,12 +3372,12 @@ final: prev: nvcode-color-schemes-vim = buildVimPluginFrom2Nix { pname = "nvcode-color-schemes-vim"; - version = "2021-06-02"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "ChristianChiarulli"; repo = "nvcode-color-schemes.vim"; - rev = "7c85366c9d457ed0e3c3532ee312307476afbbdc"; - sha256 = "02hxjwi8g07zhx6xagma5m3sa0j4ljg79377zfn2vy4snnib452p"; + rev = "cb3682a8eaf25485efe0b377f0b9e8291f68ab59"; + sha256 = "0n08mkxf4m0sz07wd893s63l17v3kvvgx5aj62nf5p7paw1zv91c"; }; meta.homepage = "https://github.com/ChristianChiarulli/nvcode-color-schemes.vim/"; }; @@ -3324,48 +3396,48 @@ final: prev: nvim-autopairs = buildVimPluginFrom2Nix { pname = "nvim-autopairs"; - version = "2021-06-05"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "windwp"; repo = "nvim-autopairs"; - rev = "b09ab7495e55f09293500aacf460d176f942504d"; - sha256 = "05w7bjn1iy1qa3ni12vm9p28y4bsz4kkfgmcs44152qmcqj13wp1"; + rev = "3069e5a6cea7e69a75f042740e66fc15169336e8"; + sha256 = "1ldsx96x8asc6hlywkba4rn2dx9j1fl682pv1gyjr1x9m9pgjvg0"; }; meta.homepage = "https://github.com/windwp/nvim-autopairs/"; }; nvim-base16 = buildVimPluginFrom2Nix { pname = "nvim-base16"; - version = "2021-05-27"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "RRethy"; repo = "nvim-base16"; - rev = "4388bb114a9c153cbe8c5745f6c3cb92edc9bf4b"; - sha256 = "0ivgdl0biiz91g5s0riva77ybzp33driwm7p7fwl94czqgyjjqc4"; + rev = "3be30f3165278e31333b44a6dcc937653893f623"; + sha256 = "1rzj8fqbbvbyjvcdkvy5p9q02f24m0fc0sbzh1wl2wk91yb42vqb"; }; meta.homepage = "https://github.com/RRethy/nvim-base16/"; }; nvim-bqf = buildVimPluginFrom2Nix { pname = "nvim-bqf"; - version = "2021-06-02"; + version = "2021-06-21"; src = fetchFromGitHub { owner = "kevinhwang91"; repo = "nvim-bqf"; - rev = "554ae68f404492c8d37381545b9a785fda30c26e"; - sha256 = "0z6xb6wsq5kjcnyiqbp2ik97yl2kb9hxy0rfccfswh5pgmfv2z1i"; + rev = "6bfc90ca36dbe602ba0696eb6569803d44f437f9"; + sha256 = "16c976gxs7lwxb8xs9iqcizmfznlilwrsaz7v32csfn38i4j77hr"; }; meta.homepage = "https://github.com/kevinhwang91/nvim-bqf/"; }; nvim-bufferline-lua = buildVimPluginFrom2Nix { pname = "nvim-bufferline-lua"; - version = "2021-06-01"; + version = "2021-06-20"; src = fetchFromGitHub { owner = "akinsho"; repo = "nvim-bufferline.lua"; - rev = "883cd1b0d8029c97bb6c3358b8e55c040b0c7bcb"; - sha256 = "06mcl11jx56wym2jfinpbklpfn55d6j35yy80dv9dy8072mb5f9f"; + rev = "fad981fd11b68b1a7a48b9283bc04ea5b48e55ff"; + sha256 = "1i2zm5rrx65dzrmxlc89szr7dghjgd7cwcdd4wm1b0hdv0if89p8"; }; meta.homepage = "https://github.com/akinsho/nvim-bufferline.lua/"; }; @@ -3396,12 +3468,12 @@ final: prev: nvim-compe = buildVimPluginFrom2Nix { pname = "nvim-compe"; - version = "2021-06-02"; + version = "2021-06-19"; src = fetchFromGitHub { owner = "hrsh7th"; repo = "nvim-compe"; - rev = "310488302c6532646adfe8228e40187a80b36ac5"; - sha256 = "1anfrybaliyaxgi8iv55hncnac8xgizqw9b9047lw2grkybmrdn4"; + rev = "f176c41f1e67bffe2dbd28f371fa55c172cf1c56"; + sha256 = "1yys3m1wmpwr44zx2my975rg2bj2d7j4pzcvfkyccqi36z3g7d8m"; }; meta.homepage = "https://github.com/hrsh7th/nvim-compe/"; }; @@ -3420,72 +3492,72 @@ final: prev: nvim-dap = buildVimPluginFrom2Nix { pname = "nvim-dap"; - version = "2021-06-03"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "mfussenegger"; repo = "nvim-dap"; - rev = "826a1931fdf1b3b67a0b456aa3abc1b72185a7a7"; - sha256 = "0g8x9vk9qv16zlbvx3h8w2vhnqyycssn5v4y8sdhsnhyjljsjygz"; + rev = "e92ef2acc81b668c90b2dbf2e2a4412ea5975242"; + sha256 = "0y27kaspmygv0lgvp6msyazhya7indqlii0rsxiahmp5sdg85qap"; }; meta.homepage = "https://github.com/mfussenegger/nvim-dap/"; }; nvim-dap-ui = buildVimPluginFrom2Nix { pname = "nvim-dap-ui"; - version = "2021-05-31"; + version = "2021-06-19"; src = fetchFromGitHub { owner = "rcarriga"; repo = "nvim-dap-ui"; - rev = "055b143fdd23fee1d86247a8ec7c43c84a2a896b"; - sha256 = "0v9mxpr5m01w948ddh598k1vzaiyq2zl6fkykbpzkijhk8qvjnv9"; + rev = "be9e71d7809f3b1e6a2f5765d782ce74b6b76b64"; + sha256 = "1648nn9h4h8fiszm626iq09kswsr644mr6kkjy2gnrkrqwkw76l7"; }; meta.homepage = "https://github.com/rcarriga/nvim-dap-ui/"; }; nvim-dap-virtual-text = buildVimPluginFrom2Nix { pname = "nvim-dap-virtual-text"; - version = "2021-05-16"; + version = "2021-06-12"; src = fetchFromGitHub { owner = "theHamsta"; repo = "nvim-dap-virtual-text"; - rev = "29a79b7c15e7e15a416bcaa0efddfe67928b7bdd"; - sha256 = "0wl9dl83cx2hlik7yx6kknb7spsaqlzri2kybf3xcna44mqfq688"; + rev = "c07c23f52e1019b237927f9520c691e57adb9e6a"; + sha256 = "0pa1xjp6h5ny7lnql8nsqszx0gpzc1fa9xiksq3k1k5yjjj4wm1z"; }; meta.homepage = "https://github.com/theHamsta/nvim-dap-virtual-text/"; }; nvim-gdb = buildVimPluginFrom2Nix { pname = "nvim-gdb"; - version = "2021-05-30"; + version = "2021-06-07"; src = fetchFromGitHub { owner = "sakhnik"; repo = "nvim-gdb"; - rev = "60994408e6684fb776bcfb80c456cbdf8bc6eb93"; - sha256 = "044bgiyhi4db5avajry9v168gz55xn6yzr83j610k95hh2aam08a"; + rev = "53bfce7a254651469ce9577349811bc76d9af46c"; + sha256 = "1xcwrjfvikb1qqyaic2m0fi12l0hmxj0y5mwx1h95karpydbb0rz"; }; meta.homepage = "https://github.com/sakhnik/nvim-gdb/"; }; nvim-highlite = buildVimPluginFrom2Nix { pname = "nvim-highlite"; - version = "2021-05-29"; + version = "2021-06-14"; src = fetchFromGitHub { owner = "Iron-E"; repo = "nvim-highlite"; - rev = "9c15a789df5af1d3c83c0d680154ca226253eb26"; - sha256 = "0dz3bbyrwgxvsdmix2h6xbgj7wv9zbj08wgy46sjhzdhaxdfjx4z"; + rev = "d0bdf0cb2d11064ac09d57bcfd48b53f0ee77124"; + sha256 = "0smkmaz36zjisnlfzjmqgvljb0xk7j07xja69va3bf7k4kcg326y"; }; meta.homepage = "https://github.com/Iron-E/nvim-highlite/"; }; nvim-hlslens = buildVimPluginFrom2Nix { pname = "nvim-hlslens"; - version = "2021-06-04"; + version = "2021-06-12"; src = fetchFromGitHub { owner = "kevinhwang91"; repo = "nvim-hlslens"; - rev = "d5ba4abab33808dbf653cc8270d82561f96b220b"; - sha256 = "0qyb6fjjcgjifkgvcy475gxplbvdvzd51z7xv2m7gshy6m4vlzk6"; + rev = "dd688e37458a6fdeb050942da8c1260389c2a99a"; + sha256 = "0q4bmp3wy0miaysldpfm6646r8c0llygfnlbmk5brs4la321hjld"; }; meta.homepage = "https://github.com/kevinhwang91/nvim-hlslens/"; }; @@ -3504,36 +3576,36 @@ final: prev: nvim-jdtls = buildVimPluginFrom2Nix { pname = "nvim-jdtls"; - version = "2021-06-03"; + version = "2021-06-15"; src = fetchFromGitHub { owner = "mfussenegger"; repo = "nvim-jdtls"; - rev = "8bd4eac08c637961b10ac01c124fb5091484c265"; - sha256 = "0jjsq718m0c1f45k9b68z0inlhy5nas48ff5yd0v29qlcv01w3wf"; + rev = "a26e1818fa62cfbcbd9728ad11bc3fc312d6e50e"; + sha256 = "00w6jdpqfzxi9kfvwig052g8c0184pq71fs9p2dryx9klcxkcjnb"; }; meta.homepage = "https://github.com/mfussenegger/nvim-jdtls/"; }; nvim-lightbulb = buildVimPluginFrom2Nix { pname = "nvim-lightbulb"; - version = "2021-03-13"; + version = "2021-06-05"; src = fetchFromGitHub { owner = "kosayoda"; repo = "nvim-lightbulb"; - rev = "9c3b264ae2da1d984f0482d5a0dfa43f567fa064"; - sha256 = "0yjxmnn3a7fw0fjwfqk284zshlw8v7wp8pn16d5m40rvbkk2ipzr"; + rev = "388cc8caaf3e10836810aabbb9283a27dd8584cd"; + sha256 = "0a7izbvpwn0sx9gvpczvl57fy9rm7jaibc4m44asjz501m04lbra"; }; meta.homepage = "https://github.com/kosayoda/nvim-lightbulb/"; }; nvim-lspconfig = buildVimPluginFrom2Nix { pname = "nvim-lspconfig"; - version = "2021-06-03"; + version = "2021-06-20"; src = fetchFromGitHub { owner = "neovim"; repo = "nvim-lspconfig"; - rev = "62c04242031ed65a8d29ebefaaf645e8e3375748"; - sha256 = "1g1s85dzz7lr3ky90m27m8f3s06xm4c87z96vwzaaajb28927774"; + rev = "48e47b4d26e45977d27c06dc1bc116416ca9276d"; + sha256 = "1zf4sv91i3qkr9d8cbn9vzk2sc5bknjsjdhzvpf1zjr72bxx3q37"; }; meta.homepage = "https://github.com/neovim/nvim-lspconfig/"; }; @@ -3576,12 +3648,12 @@ final: prev: nvim-scrollview = buildVimPluginFrom2Nix { pname = "nvim-scrollview"; - version = "2021-05-08"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "dstein64"; repo = "nvim-scrollview"; - rev = "bf7155b11278b5c849ddde2da76bfade668d8a92"; - sha256 = "01pcvq1kany4nrni4g7jnqkdg23bgyl68hfwfqcw8xabrl46p746"; + rev = "f0423e8085503889170b695d56191b29b51239e2"; + sha256 = "193h67azj8pldx8csphb7vaj7sza1kv5ayzxx1xq9fynywwncjyy"; }; meta.homepage = "https://github.com/dstein64/nvim-scrollview/"; }; @@ -3600,48 +3672,48 @@ final: prev: nvim-toggleterm-lua = buildVimPluginFrom2Nix { pname = "nvim-toggleterm-lua"; - version = "2021-06-01"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "akinsho"; repo = "nvim-toggleterm.lua"; - rev = "53134b08a5a5e66f343c4e431966a0a19ce2d162"; - sha256 = "00gxkl87f8gawil9bdxa5s15yswc1ac4y9c5vx3kmhv6g5ipcrrn"; + rev = "f8cf9ec7592e8b8c19a56f5985cec108e18c3101"; + sha256 = "13ayc57q7r3bns0y6qqqhsi2rr1kqi0bxzdw4qz3my4nj3npqk9h"; }; meta.homepage = "https://github.com/akinsho/nvim-toggleterm.lua/"; }; nvim-tree-lua = buildVimPluginFrom2Nix { pname = "nvim-tree-lua"; - version = "2021-06-05"; + version = "2021-06-15"; src = fetchFromGitHub { owner = "kyazdani42"; repo = "nvim-tree.lua"; - rev = "f56ac7884c9b12343d66a2bacf90097af3c58cf6"; - sha256 = "0v2aznndmc5bsipqbj4q40qqmv384z6k5xh17yfcp7a6iak5zzjq"; + rev = "bfeaf4c8ef5ff24e93005da2561407a13ba69d4d"; + sha256 = "0sqydjvcjrqzw91b7sk7y9rrcs0l2j34hshcbwwwz8nrilfk6ak7"; }; meta.homepage = "https://github.com/kyazdani42/nvim-tree.lua/"; }; nvim-treesitter = buildVimPluginFrom2Nix { pname = "nvim-treesitter"; - version = "2021-06-04"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "nvim-treesitter"; repo = "nvim-treesitter"; - rev = "b5d603a876fe8c89e96a9cac2dac2dd375479dac"; - sha256 = "1x2cn0v7yyqlwz8g4vqxh0vai372946a1akbg50pldq24jxm8j0q"; + rev = "c04aa172a3feab61f8f4fbfa0e3d47fa12513485"; + sha256 = "00sp2v423j10rh6hfiwkl7cfnq5y1zjzsfi87sy01phcw5i4aa25"; }; meta.homepage = "https://github.com/nvim-treesitter/nvim-treesitter/"; }; nvim-treesitter-context = buildVimPluginFrom2Nix { pname = "nvim-treesitter-context"; - version = "2021-05-25"; + version = "2021-06-05"; src = fetchFromGitHub { owner = "romgrk"; repo = "nvim-treesitter-context"; - rev = "af10a3251f3e826c3fb2062ddeb4c74f23a2f52d"; - sha256 = "1pl1v28wscdcns4cs2cv44rh0vrk8fwmr2banjgp5lcjynivzrwr"; + rev = "bdc598b519cfbfdf61baf9a27953da2fc1642b23"; + sha256 = "1slyjfjcrna06b23kbw4vf81qbncgimzhw1qsqwsqldnvdc35lcr"; }; meta.homepage = "https://github.com/romgrk/nvim-treesitter-context/"; }; @@ -3672,24 +3744,24 @@ final: prev: nvim-treesitter-textobjects = buildVimPluginFrom2Nix { pname = "nvim-treesitter-textobjects"; - version = "2021-06-02"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "nvim-treesitter"; repo = "nvim-treesitter-textobjects"; - rev = "cadb8110817884fff506043497c0f2b92026aacb"; - sha256 = "01f1913r1q1x1qwp6l6xrqxfc9lffngnc8js5n37r7naszc9r7w8"; + rev = "2271ffecd5fad9c74fb12c125f39a21ffb5a7673"; + sha256 = "1acmhal848jjxv12cp4ihd3jmg6rj8q31v2si15chzap4iizhchc"; }; meta.homepage = "https://github.com/nvim-treesitter/nvim-treesitter-textobjects/"; }; nvim-ts-rainbow = buildVimPluginFrom2Nix { pname = "nvim-ts-rainbow"; - version = "2021-06-04"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "p00f"; repo = "nvim-ts-rainbow"; - rev = "0fffdcb37cf7d43bc138c89eb002957819c748af"; - sha256 = "0xd79f7a7zyqj6yzkjanli8r4wjhy17gsp1wl7p7vws6axrbgvjl"; + rev = "c2a5af6b6f08b883ac6925273142eb178178a2f6"; + sha256 = "1z07c9w8ms6gpqjy1xfjhqbr1zn717i6gyn9vm7wm60rk86xrn3j"; }; meta.homepage = "https://github.com/p00f/nvim-ts-rainbow/"; }; @@ -3768,24 +3840,24 @@ final: prev: one-nvim = buildVimPluginFrom2Nix { pname = "one-nvim"; - version = "2021-06-02"; + version = "2021-06-10"; src = fetchFromGitHub { owner = "Th3Whit3Wolf"; repo = "one-nvim"; - rev = "d6e62bc7cdfae97d1ffc4f508a43955664ad5b73"; - sha256 = "0bna2kpvaxvwglgmdgp1g93bcygvnc1c25w4isawlgmsclzz9cc6"; + rev = "faf6fb3f98fccbe009c3466f657a8fff84a5f956"; + sha256 = "1ajg3vlrms2jy23sd2my0yrrng6wfjklq8fkpnkgxypd4gy6k9rv"; }; meta.homepage = "https://github.com/Th3Whit3Wolf/one-nvim/"; }; onedark-vim = buildVimPluginFrom2Nix { pname = "onedark-vim"; - version = "2021-06-02"; + version = "2021-06-22"; src = fetchFromGitHub { owner = "joshdick"; repo = "onedark.vim"; - rev = "f209c5b6741e6cf847bf4a77e19f2fbf6ffc5290"; - sha256 = "146ypfx9rxcfp031a4zhzns637bjsf0bznplgyfmz3zjarj85422"; + rev = "a4dadcd2a37ea69624a808fd8fd47b540c797a45"; + sha256 = "16pqifn99c1y1g70pg2rqh6pr5p3cznl68l77z7b4rjpk01s9c2v"; }; meta.homepage = "https://github.com/joshdick/onedark.vim/"; }; @@ -3828,12 +3900,12 @@ final: prev: packer-nvim = buildVimPluginFrom2Nix { pname = "packer-nvim"; - version = "2021-06-03"; + version = "2021-06-22"; src = fetchFromGitHub { owner = "wbthomason"; repo = "packer.nvim"; - rev = "3715ce44c0aae69471511bd93789ccf578c9684c"; - sha256 = "1xcfmv7dn975hqa1izn4h80vpn3yksm8ali6nbxv62sij6m9na48"; + rev = "40663b4e515ea65c51a17d1135cbda516e0e0917"; + sha256 = "1yfl16a7vdj6g3k2mg1f805xzxdfsnkqfgccbppzbpqy7m2896cr"; }; meta.homepage = "https://github.com/wbthomason/packer.nvim/"; }; @@ -3936,12 +4008,12 @@ final: prev: plenary-nvim = buildVimPluginFrom2Nix { pname = "plenary-nvim"; - version = "2021-06-02"; + version = "2021-06-19"; src = fetchFromGitHub { owner = "nvim-lua"; repo = "plenary.nvim"; - rev = "3834d42236c155bb4240fb4008ea6e62c4a21dae"; - sha256 = "1y9aqpb6j36873kcp8dbv5mm04qccjicrs0z0z9cy53s8sgfx558"; + rev = "268002fdba2f8f5a4e86574e3b9924ad6d42da20"; + sha256 = "07zskz9b5s4cainjqj431b2skzdrhnm8agydmjxmw13qjmwj0q7z"; }; meta.homepage = "https://github.com/nvim-lua/plenary.nvim/"; }; @@ -3983,6 +4055,18 @@ final: prev: meta.homepage = "https://github.com/nvim-lua/popup.nvim/"; }; + presence-nvim = buildVimPluginFrom2Nix { + pname = "presence-nvim"; + version = "2021-06-14"; + src = fetchFromGitHub { + owner = "andweeb"; + repo = "presence.nvim"; + rev = "65a16b25f98891e2832daa437cdd682e546a494e"; + sha256 = "0fwxxrwad3y69bczs7rxa0brff4vp139w2ylv8rfh0v2dgx2gmay"; + }; + meta.homepage = "https://github.com/andweeb/presence.nvim/"; + }; + PreserveNoEOL = buildVimPluginFrom2Nix { pname = "PreserveNoEOL"; version = "2013-06-14"; @@ -4057,12 +4141,12 @@ final: prev: quick-scope = buildVimPluginFrom2Nix { pname = "quick-scope"; - version = "2020-12-28"; + version = "2021-06-22"; src = fetchFromGitHub { owner = "unblevable"; repo = "quick-scope"; - rev = "d4c02b85ff168f7749833607536cb02281464c26"; - sha256 = "16hl1np40p3wrk1q0blmxfaa28lljvca1dv9xpiw1ddm9n7qlr21"; + rev = "51d02018e66f010d5c65fb0dc822fd42d9cb5a3a"; + sha256 = "0nf29j3xy3wai76ivh3fld23gcvg6f1cw51lnimsac4j2nvc5x7y"; }; meta.homepage = "https://github.com/unblevable/quick-scope/"; }; @@ -4165,12 +4249,12 @@ final: prev: registers-nvim = buildVimPluginFrom2Nix { pname = "registers-nvim"; - version = "2021-05-28"; + version = "2021-06-21"; src = fetchFromGitHub { owner = "tversteeg"; repo = "registers.nvim"; - rev = "34bbf868da6ef0225739e7977a4063872cd2b1e8"; - sha256 = "0ghy760dc07xwjaf5ci2di8qfq0qip8jyrp7x0rsl820ryy7rggy"; + rev = "6817136df80ae9ddb980a97f7e4cf31cc4f9fa4a"; + sha256 = "13di6mjn6wb931ak98g1xl99j97c2kphhqrbwh673nl7syqwhnrf"; }; meta.homepage = "https://github.com/tversteeg/registers.nvim/"; }; @@ -4261,12 +4345,12 @@ final: prev: rust-tools-nvim = buildVimPluginFrom2Nix { pname = "rust-tools-nvim"; - version = "2021-06-03"; + version = "2021-06-15"; src = fetchFromGitHub { owner = "simrat39"; repo = "rust-tools.nvim"; - rev = "177507f1443be150250ce90c18f5f6fb8d798543"; - sha256 = "0wj6pccjbcvj42i4516y6wjrssyl3p060454yjxhgqnnnzxc2dh4"; + rev = "493202aa28b5b9e4aa378ad04de50162ec1f353c"; + sha256 = "11azahjqg6wvahchds8hanbs8qrx2kjz7g5vcxcfyajfpns1ck6r"; }; meta.homepage = "https://github.com/simrat39/rust-tools.nvim/"; }; @@ -4405,12 +4489,13 @@ final: prev: sideways-vim = buildVimPluginFrom2Nix { pname = "sideways-vim"; - version = "2021-05-24"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "AndrewRadev"; repo = "sideways.vim"; - rev = "9ce855ab448467dc1468ef8b46bb86d38aa3d0fa"; - sha256 = "0ldz09hjck5pq0lhbk93gm1zvc0aifsfk75w5pzrwqmwidimzyid"; + rev = "8703f642db4e545525e6fb10e97c843c74c61964"; + sha256 = "1rmrxr53i7vmwh7wrrbcb24jyrqrph6bqr2bifhhgwy1kxx04gvg"; + fetchSubmodules = true; }; meta.homepage = "https://github.com/AndrewRadev/sideways.vim/"; }; @@ -4463,6 +4548,18 @@ final: prev: meta.homepage = "https://github.com/gorkunov/smartpairs.vim/"; }; + snap = buildVimPluginFrom2Nix { + pname = "snap"; + version = "2021-06-26"; + src = fetchFromGitHub { + owner = "camspiers"; + repo = "snap"; + rev = "9410aa77fb8771288ef0a882cd7e8ee81af51107"; + sha256 = "165a8hdkg0ma5s6gbnrhw0sqx37ilmfka6lq5k843sm5h98xyad7"; + }; + meta.homepage = "https://github.com/camspiers/snap/"; + }; + snippets-nvim = buildVimPluginFrom2Nix { pname = "snippets-nvim"; version = "2020-09-09"; @@ -4477,12 +4574,12 @@ final: prev: sonokai = buildVimPluginFrom2Nix { pname = "sonokai"; - version = "2021-06-01"; + version = "2021-06-08"; src = fetchFromGitHub { owner = "sainnhe"; repo = "sonokai"; - rev = "9dd432b1bce0bd448faf22375fcf6311ff0d4226"; - sha256 = "0asqmnyizcyg5drfhbm52l654q3s5ibvbnd8n45kbcn3cnaqb148"; + rev = "5c1fc0452387cae323692e3345238a780a942056"; + sha256 = "0j2bba7img06m6b7lzgw1q5r8g38cs70pynwisqdb34l5jbj0fqx"; }; meta.homepage = "https://github.com/sainnhe/sonokai/"; }; @@ -4513,12 +4610,12 @@ final: prev: Spacegray-vim = buildVimPluginFrom2Nix { pname = "Spacegray-vim"; - version = "2021-01-02"; + version = "2021-06-15"; src = fetchFromGitHub { owner = "ackyshake"; repo = "Spacegray.vim"; - rev = "012ff0065eac2c149084d59e1272ec0d740051ab"; - sha256 = "0y0jlycgsc8ll5gnqmjc9blyn9ynnzrgnp280k49h4lh5b689y5m"; + rev = "0aa4e5c973413add9766689385bf9137d8c6cbc9"; + sha256 = "12lwvcm2ahwvr8gj1sdlgf42cd2f4xxjmiir68f09yimzajip7yi"; }; meta.homepage = "https://github.com/ackyshake/Spacegray.vim/"; }; @@ -4585,12 +4682,12 @@ final: prev: splitjoin-vim = buildVimPluginFrom2Nix { pname = "splitjoin-vim"; - version = "2021-04-24"; + version = "2021-06-07"; src = fetchFromGitHub { owner = "AndrewRadev"; repo = "splitjoin.vim"; - rev = "f4773c0d2f7453fea23f5f69f433547f3d62ea0a"; - sha256 = "06fsfsvrq6sqyqpmj693vn810c6zvzn16781mw6bb2912cmyrs5z"; + rev = "a8c4af3d69839cd2c03d458044fb3d3b128e450d"; + sha256 = "0s87vzdb3j3hna5yda4jay1k4zw419mqd8yn3h4q22qhhsr36q0k"; fetchSubmodules = true; }; meta.homepage = "https://github.com/AndrewRadev/splitjoin.vim/"; @@ -4754,12 +4851,12 @@ final: prev: tagbar = buildVimPluginFrom2Nix { pname = "tagbar"; - version = "2021-05-27"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "preservim"; repo = "tagbar"; - rev = "225e6530c2b083e37744b23bac74ae40d7639d68"; - sha256 = "0qgks9li8zp7lvagq2wzhr4ahzzalgjzps4l9laj5rq3klmc270v"; + rev = "2da3443f5fb78aa0b9a60bb5b2926d72df734e14"; + sha256 = "0xihnfp1jv3ixhinqvnfig1v5k8swf3vcqjavspchd94lnb4b2h4"; }; meta.homepage = "https://github.com/preservim/tagbar/"; }; @@ -4790,12 +4887,12 @@ final: prev: taskwiki = buildVimPluginFrom2Nix { pname = "taskwiki"; - version = "2021-05-22"; + version = "2021-06-27"; src = fetchFromGitHub { owner = "tools-life"; repo = "taskwiki"; - rev = "48e24b03c079be43e296981b2ed0a464bbb710d2"; - sha256 = "0x57cjzxhphvmxai4pl5752vvi6mlgf0d2mwwnwj0mwc8h0n5dhz"; + rev = "f9a1e6ab9f10bd02fab05c225ccca6e253e690a0"; + sha256 = "12f1i8dfmd4n3wc4cs45csl6j6aw4g7i6bbqnk017sylwxpiilsq"; }; meta.homepage = "https://github.com/tools-life/taskwiki/"; }; @@ -4863,12 +4960,12 @@ final: prev: telescope-symbols-nvim = buildVimPluginFrom2Nix { pname = "telescope-symbols-nvim"; - version = "2021-02-04"; + version = "2021-06-15"; src = fetchFromGitHub { owner = "nvim-telescope"; repo = "telescope-symbols.nvim"; - rev = "5139fdf31fdffdac75209362409d62d2b6033a20"; - sha256 = "0va4czhncw7jhirbqr7wdap4qg3i5x7g6ic8migpmv57ym2py0m9"; + rev = "e211b6aeed1f94ca660c407f3052f83ab8f4b2a9"; + sha256 = "0nd02akh5nmcnv8mqih6xpzc4pbhys6rva7v60p38kxx50ycfkvw"; }; meta.homepage = "https://github.com/nvim-telescope/telescope-symbols.nvim/"; }; @@ -4887,12 +4984,12 @@ final: prev: telescope-nvim = buildVimPluginFrom2Nix { pname = "telescope-nvim"; - version = "2021-06-03"; + version = "2021-06-14"; src = fetchFromGitHub { owner = "nvim-telescope"; repo = "telescope.nvim"; - rev = "2697bcfaf0fac861e08c3a55d9334ec6d823029f"; - sha256 = "0q9kq64y3yrazcks476yplkrhx59z82ij5wj1w8qakidy2i008z1"; + rev = "6ac5ee0854fe02d651cadf2fc97a2463ff92f322"; + sha256 = "1k2glya8cd000kzfvx5fif9fcqvcq1k2vrkwyzhfm4yngz7bxm1p"; }; meta.homepage = "https://github.com/nvim-telescope/telescope.nvim/"; }; @@ -4983,12 +5080,12 @@ final: prev: todo-comments-nvim = buildVimPluginFrom2Nix { pname = "todo-comments-nvim"; - version = "2021-05-26"; + version = "2021-06-17"; src = fetchFromGitHub { owner = "folke"; repo = "todo-comments.nvim"; - rev = "8560546c466d1f555573d37e062e95e7ae94bbab"; - sha256 = "1g0ypjdcj7sp433n933n3qazp7301b2q7p968v57mgmlh5saq6kb"; + rev = "edbe161856eacc859987eaf28d41b67163d49791"; + sha256 = "0mq5bx767zw1k7sxxrkijz3rz5hwi93xsxidppfg13qybi519jai"; }; meta.homepage = "https://github.com/folke/todo-comments.nvim/"; }; @@ -5008,12 +5105,12 @@ final: prev: traces-vim = buildVimPluginFrom2Nix { pname = "traces-vim"; - version = "2021-01-23"; + version = "2021-06-16"; src = fetchFromGitHub { owner = "markonm"; repo = "traces.vim"; - rev = "0f29f8e53503b8ce0bb43467064b2401cf34acd1"; - sha256 = "1xx2b59wcnbh5662j7b68maz5ccxj5xpfpnjn2r669aiv0a5snhw"; + rev = "e36a2e45791ef9078de781a781fec70e160044b0"; + sha256 = "1qndaqs38mgkl15n895nzjc98h2cy4gjgr3r72cpwhn9qmzhi5zc"; }; meta.homepage = "https://github.com/markonm/traces.vim/"; }; @@ -5044,12 +5141,12 @@ final: prev: trouble-nvim = buildVimPluginFrom2Nix { pname = "trouble-nvim"; - version = "2021-06-04"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "folke"; repo = "trouble.nvim"; - rev = "a7dca6204316b9be7c95d056088c67371151c8ab"; - sha256 = "0b2wha4qmn9gb5fmj57ymhn3jrajq71yk48m8gddr1hx244adknh"; + rev = "7de8bc46164ec1f787dee34b6843b61251b1ea91"; + sha256 = "1ybv7vdvyvyx09zwwx1vw91ids13g24as0ag0jnw6ck95f12r7mn"; }; meta.homepage = "https://github.com/folke/trouble.nvim/"; }; @@ -5092,12 +5189,12 @@ final: prev: ultisnips = buildVimPluginFrom2Nix { pname = "ultisnips"; - version = "2021-05-18"; + version = "2021-06-15"; src = fetchFromGitHub { owner = "SirVer"; repo = "ultisnips"; - rev = "b3fd9022bdc3472dac114a8b2aa85b845189514b"; - sha256 = "0yss85xy3i6gfgpwy3h42db5q5gpmv9m3s64ygfix5f24lflsi98"; + rev = "aec91caefec10741722927cf073703a528fe7a8f"; + sha256 = "1a5527adkaawgcj1pm5qp0qiq084x70ljj7a35abjil20f3s7y85"; }; meta.homepage = "https://github.com/SirVer/ultisnips/"; }; @@ -5440,12 +5537,12 @@ final: prev: vim-airline = buildVimPluginFrom2Nix { pname = "vim-airline"; - version = "2021-06-04"; + version = "2021-06-07"; src = fetchFromGitHub { owner = "vim-airline"; repo = "vim-airline"; - rev = "82b1b2e87677b468a3b6140372839654d8c346e7"; - sha256 = "0vvaj84q72z5b473f4823laxdvqb1qqj83n05ixavzpjq2qnlmhq"; + rev = "49cdcb7b3ea76ee19c737885c0ab19e64e564169"; + sha256 = "17p0j9i6ylns66cx6qw4266yd6al1gvmran3k4v2mhjlynf5c4s3"; }; meta.homepage = "https://github.com/vim-airline/vim-airline/"; }; @@ -5474,6 +5571,18 @@ final: prev: meta.homepage = "https://github.com/vim-airline/vim-airline-themes/"; }; + vim-alias = buildVimPluginFrom2Nix { + pname = "vim-alias"; + version = "2021-05-25"; + src = fetchFromGitHub { + owner = "Konfekt"; + repo = "vim-alias"; + rev = "9d1a86284c223fad488137075867ba1c1bd20599"; + sha256 = "1fqa39j3ax7cvj7bn33r545zwbplmf4b6n7z5jgqqn8h03hsq7x1"; + }; + meta.homepage = "https://github.com/Konfekt/vim-alias/"; + }; + vim-android = buildVimPluginFrom2Nix { pname = "vim-android"; version = "2021-05-28"; @@ -5536,12 +5645,12 @@ final: prev: vim-autoformat = buildVimPluginFrom2Nix { pname = "vim-autoformat"; - version = "2021-05-24"; + version = "2021-06-21"; src = fetchFromGitHub { owner = "vim-autoformat"; repo = "vim-autoformat"; - rev = "728d42f93054e15d260e25da0255378f171df7d2"; - sha256 = "1r86100i30jqyxz1hc4z6ykx5s44iaapffs1xbv3pg8grz8fmf6x"; + rev = "d616fcf8a747f86bd3b26004b83ea5b7c7526df1"; + sha256 = "1292613i7yi38jsl1sly5i9bdi7bzaw2pg67gkymq2ln7zcpvims"; }; meta.homepage = "https://github.com/vim-autoformat/vim-autoformat/"; }; @@ -5618,6 +5727,18 @@ final: prev: meta.homepage = "https://github.com/ntpeters/vim-better-whitespace/"; }; + vim-bracketed-paste = buildVimPluginFrom2Nix { + pname = "vim-bracketed-paste"; + version = "2018-05-22"; + src = fetchFromGitHub { + owner = "ConradIrwin"; + repo = "vim-bracketed-paste"; + rev = "c4c639f3cacd1b874ed6f5f196fac772e089c932"; + sha256 = "1hhi7ab36iscv9l7i64qymckccnjs9pzv0ccnap9gj5xigwz6p9h"; + }; + meta.homepage = "https://github.com/ConradIrwin/vim-bracketed-paste/"; + }; + vim-bsv = buildVimPluginFrom2Nix { pname = "vim-bsv"; version = "2020-11-08"; @@ -5680,12 +5801,12 @@ final: prev: vim-carbon-now-sh = buildVimPluginFrom2Nix { pname = "vim-carbon-now-sh"; - version = "2020-10-28"; + version = "2021-06-18"; src = fetchFromGitHub { owner = "kristijanhusak"; repo = "vim-carbon-now-sh"; - rev = "f4a3e5c9be2e587511f79e46fb0b48d6d646d719"; - sha256 = "1ldv9l0swh6wk3wpyy0apnmg9gfcdzkgfdv8p0qm7j7pqdz981br"; + rev = "d63101f65513cffe8834627ee127c067a7be5ad1"; + sha256 = "1dvhhybykq9lppncxr3klh0x5j7rdw0dh55xhn58d4k3jdfwvrh8"; }; meta.homepage = "https://github.com/kristijanhusak/vim-carbon-now-sh/"; }; @@ -5716,12 +5837,12 @@ final: prev: vim-clap = buildVimPluginFrom2Nix { pname = "vim-clap"; - version = "2021-06-04"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "liuchengxu"; repo = "vim-clap"; - rev = "c743b1171194f85469a64556a1f54882cb73cc17"; - sha256 = "0ws8rvvmszcspwvzns7i82l458sa2mhi0013li8c61g1g2wbpphn"; + rev = "492eca7ff8e162ec8a8e4535860de399d7e1cd57"; + sha256 = "1xxgf3mk26pj3w2lzdr4aw8xvya02ar57v01v1yajlw0rzx23crw"; }; meta.homepage = "https://github.com/liuchengxu/vim-clap/"; }; @@ -5944,12 +6065,12 @@ final: prev: vim-cue = buildVimPluginFrom2Nix { pname = "vim-cue"; - version = "2020-10-26"; + version = "2021-06-18"; src = fetchFromGitHub { owner = "jjo"; repo = "vim-cue"; - rev = "9e8bef1198817b6bae1143fecd965403d65d2466"; - sha256 = "0rq74znq9mx5p925jd120l5apjqdqp6xy6llzhf2gq5cxpg62hjl"; + rev = "bd1a62303d096aa24fe4160a475645087f8770b3"; + sha256 = "01f89ki0w2j58pfdvb8w0sf1x5nqgqh3bldinifpd4pysnqhniai"; }; meta.homepage = "https://github.com/jjo/vim-cue/"; }; @@ -6220,12 +6341,12 @@ final: prev: vim-elixir = buildVimPluginFrom2Nix { pname = "vim-elixir"; - version = "2021-05-16"; + version = "2021-06-16"; src = fetchFromGitHub { owner = "elixir-editors"; repo = "vim-elixir"; - rev = "6dc61ad4dcfa520d56f3a4373bd507f529a25382"; - sha256 = "1rqr16wcwzrs6w9iwg4wghqm7nb1jgzwjmfimvclnkbqpp8ssaq6"; + rev = "58084475c1e523caeac97ffff62c154f7f8fcc66"; + sha256 = "09nv87iqjnwpfkvbspgwxibjlf1aj4syw0nv885fyw8fjpbhf06l"; }; meta.homepage = "https://github.com/elixir-editors/vim-elixir/"; }; @@ -6424,12 +6545,12 @@ final: prev: vim-floaterm = buildVimPluginFrom2Nix { pname = "vim-floaterm"; - version = "2021-05-26"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "voldikss"; repo = "vim-floaterm"; - rev = "808cb148d552d0369b0d2b74492086b1bfdbd22a"; - sha256 = "0mv56lb18zcjp18jfr9a8262bjsnsjsgirw8a2md8df60gd5jn5n"; + rev = "cb6ea20165aeb437d1bf16ca45275748b836c1ce"; + sha256 = "1kv309fyf56vp0lglm8b93m4jk5yb8w0bm9gjr9wql4p32nlxkc1"; }; meta.homepage = "https://github.com/voldikss/vim-floaterm/"; }; @@ -6484,12 +6605,12 @@ final: prev: vim-fugitive = buildVimPluginFrom2Nix { pname = "vim-fugitive"; - version = "2021-06-03"; + version = "2021-06-19"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-fugitive"; - rev = "f7f1413ed9b69eb80c8af07d38ebcc889ed64d96"; - sha256 = "16az604z245bw64dhkgmszifg1ajnf0i9binllixwaifnh6vfnhh"; + rev = "79e2bd381ad6e7f3d70ce4a8ec9f3f107b40f053"; + sha256 = "0blgivpm1zbbm1pj77c1ks1w3aa9vid77h08146npa4xi6nnyzwf"; }; meta.homepage = "https://github.com/tpope/vim-fugitive/"; }; @@ -6556,12 +6677,12 @@ final: prev: vim-gitgutter = buildVimPluginFrom2Nix { pname = "vim-gitgutter"; - version = "2021-06-03"; + version = "2021-06-08"; src = fetchFromGitHub { owner = "airblade"; repo = "vim-gitgutter"; - rev = "68a8cb300c75eb1cd2173b2aac70515e99904ef3"; - sha256 = "0s4c1vb2z3manl2i768f48i2pww2d4dj41plx4mvvi7sczlma30n"; + rev = "0f98634b92da9a35580b618c11a6d2adc42d9f90"; + sha256 = "0l1f98zfmxq8xi2ii31ih0mbq5yilpc0l61qbprs1g5h5p4azjy8"; }; meta.homepage = "https://github.com/airblade/vim-gitgutter/"; }; @@ -6604,12 +6725,12 @@ final: prev: vim-go = buildVimPluginFrom2Nix { pname = "vim-go"; - version = "2021-06-04"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "fatih"; repo = "vim-go"; - rev = "edd8c160e54c2861a617777192a48d0a64704192"; - sha256 = "1xdggzasvv3x1h61yqp2rl30r6kppf6aqdjqsrpzihz809w5zgry"; + rev = "e32b1a46ad5fc1fcb6765ef6150726c0af174c68"; + sha256 = "04pbqwi4n0dyhhfwi3kp78dnyxdza2bg5pn7wbbkz7c6k3jhjysa"; }; meta.homepage = "https://github.com/fatih/vim-go/"; }; @@ -6652,12 +6773,12 @@ final: prev: vim-gruvbox8 = buildVimPluginFrom2Nix { pname = "vim-gruvbox8"; - version = "2021-05-28"; + version = "2021-06-13"; src = fetchFromGitHub { owner = "lifepillar"; repo = "vim-gruvbox8"; - rev = "66d58b569fdbe0ec389acb66eb4a585f3110e43e"; - sha256 = "0bggkq2p109vc67s0idplrf4sy4j12smwkx2wvsc626bzflzc2fb"; + rev = "73bd562267d3dea92b6e8dd1f0e3caca024927ad"; + sha256 = "01x0y5ma7wz2yjcq12zzlmkn8x4yz4gcmxmkyrcy127pnhjn8a23"; }; meta.homepage = "https://github.com/lifepillar/vim-gruvbox8/"; }; @@ -6688,12 +6809,12 @@ final: prev: vim-hardtime = buildVimPluginFrom2Nix { pname = "vim-hardtime"; - version = "2020-05-01"; + version = "2021-06-11"; src = fetchFromGitHub { owner = "takac"; repo = "vim-hardtime"; - rev = "ef06cf30fd3843e7857fdb79c6868660220b9391"; - sha256 = "0yhai27zqkdmgck1iy64fw9yy2vghmqvj4g2lbh21h50df1sa8cf"; + rev = "00fde0a5e3fe15e329bdeac5331e4b439b6972a8"; + sha256 = "1c66q7bcg0m19zjd3yz5ywhm094cr48yr6rxp8zhlavaswwx8wz7"; }; meta.homepage = "https://github.com/takac/vim-hardtime/"; }; @@ -6905,12 +7026,12 @@ final: prev: vim-illuminate = buildVimPluginFrom2Nix { pname = "vim-illuminate"; - version = "2021-06-03"; + version = "2021-06-12"; src = fetchFromGitHub { owner = "RRethy"; repo = "vim-illuminate"; - rev = "daa49da1e7a6d8c8dcbd3a40f91046d1505fd645"; - sha256 = "1qvnij7z48g1m6n2qz5lbgbiwwaqnb626sz6qvhkd5jh556pmfah"; + rev = "8fe150bd775f659da7e40ea2d3ad7473e6d29494"; + sha256 = "1y8bhfcbk5062nrscihr24p8b955c09hnbii5grb4x16jir06cbg"; }; meta.homepage = "https://github.com/RRethy/vim-illuminate/"; }; @@ -7302,12 +7423,12 @@ final: prev: vim-lsp = buildVimPluginFrom2Nix { pname = "vim-lsp"; - version = "2021-06-02"; + version = "2021-06-16"; src = fetchFromGitHub { owner = "prabirshrestha"; repo = "vim-lsp"; - rev = "ddd5abb5b6491117c4b7ef4149e47945926eecd8"; - sha256 = "0xv687xzwqhwpmxr65sm3ln74y8mxww1q3fqj57va06ilxzac56c"; + rev = "fb0a72306e1fc42c1ce8909aa1e420ddfccf6fbf"; + sha256 = "0dzy7cvpmzvx6z5pifzj4y7biln5gcn4iic35ha58ixwgwcw784m"; }; meta.homepage = "https://github.com/prabirshrestha/vim-lsp/"; }; @@ -7411,12 +7532,12 @@ final: prev: vim-matchup = buildVimPluginFrom2Nix { pname = "vim-matchup"; - version = "2021-06-02"; + version = "2021-06-17"; src = fetchFromGitHub { owner = "andymass"; repo = "vim-matchup"; - rev = "fd9f3c09b04725c8042149bfe3fd080b6f6962cb"; - sha256 = "08cqh4b01jl0iqd1nj2sw2jcwxp48m9rdh50sdnfjgdvynnpagik"; + rev = "4cd3736a6869ab0b0a4b739dbde11f1f6129beea"; + sha256 = "1i863kl9n2cwkdidn8gajm5n2hv0mfqir4xycva54fw28mads8ds"; }; meta.homepage = "https://github.com/andymass/vim-matchup/"; }; @@ -7795,12 +7916,12 @@ final: prev: vim-pandoc = buildVimPluginFrom2Nix { pname = "vim-pandoc"; - version = "2021-04-30"; + version = "2021-06-09"; src = fetchFromGitHub { owner = "vim-pandoc"; repo = "vim-pandoc"; - rev = "587399591a9e9b8da9846c0d724a84a3bd1ce98e"; - sha256 = "1xghmq15i8wqfwx7gib8j54c5s3an9q4idy6c6mbywd75s4384m5"; + rev = "1c56693951ce81f344cff0d7c8a6f7ea62a06981"; + sha256 = "017g2cq05pfxjmcdm42qz6pv2cf2v18lnnrfnizm1cd388r9byll"; }; meta.homepage = "https://github.com/vim-pandoc/vim-pandoc/"; }; @@ -7879,12 +8000,12 @@ final: prev: vim-pencil = buildVimPluginFrom2Nix { pname = "vim-pencil"; - version = "2021-02-06"; + version = "2021-06-19"; src = fetchFromGitHub { owner = "preservim"; repo = "vim-pencil"; - rev = "2135374d48a7cb89efd5e818c12bb0ff450dfbb4"; - sha256 = "17wgin33fj40brdb3zhm70qls2j2vssc4yrrv36y1qxwi7gdzn0f"; + rev = "942e02e53cc2d914f215a2c69707fbdbdd137f86"; + sha256 = "098agz8kiycn6nhv42r43dmbc5hng3d7nwk0zgiws7cz8si4kf0s"; }; meta.homepage = "https://github.com/preservim/vim-pencil/"; }; @@ -7939,12 +8060,12 @@ final: prev: vim-polyglot = buildVimPluginFrom2Nix { pname = "vim-polyglot"; - version = "2021-06-04"; + version = "2021-06-09"; src = fetchFromGitHub { owner = "sheerun"; repo = "vim-polyglot"; - rev = "c312d30231f136d2fbb32a2cfea554af5066e6b0"; - sha256 = "1apd860v2xfi3fjgl15j7mgn6nczx10vj324w1vf1ic5nyy4b594"; + rev = "4899585281beab51e5dff1d9ae4d3159244a8275"; + sha256 = "1518dvxf99nvky0mrvgv65if0wjhpiv3021rddhn52j04vri4pdd"; }; meta.homepage = "https://github.com/sheerun/vim-polyglot/"; }; @@ -8071,12 +8192,12 @@ final: prev: vim-qf = buildVimPluginFrom2Nix { pname = "vim-qf"; - version = "2021-03-29"; + version = "2021-06-08"; src = fetchFromGitHub { owner = "romainl"; repo = "vim-qf"; - rev = "127257057c4befb8c1026a7ba7e07713af1fb5c8"; - sha256 = "1ai915kfxq4m8ba304qpcc2qb5rcj2vsrfcdh3blb1slw3a90hiq"; + rev = "4fe7e33a514874692d6897edd1acaaa46d9fb646"; + sha256 = "054p9f3a3yljng3r51asgyq2ifmmrr35ws5f8dv8ssmby2f7an1l"; }; meta.homepage = "https://github.com/romainl/vim-qf/"; }; @@ -8095,12 +8216,12 @@ final: prev: vim-quickrun = buildVimPluginFrom2Nix { pname = "vim-quickrun"; - version = "2021-05-18"; + version = "2021-06-18"; src = fetchFromGitHub { owner = "thinca"; repo = "vim-quickrun"; - rev = "759c9dd42d02c8634a044af998fd895682a0ce75"; - sha256 = "0wdfya3kzk0xygk8ngg1kz1kdd3qzfxld3w0bq3pxsns41838a8c"; + rev = "e5e83bfd613bd58aa6bbbfaaed2f7eef1ed0b378"; + sha256 = "1zcjlz5d4bp0y28mxlzlyb76klpwr49i0kgzpab2v5vy8qlzsvxb"; }; meta.homepage = "https://github.com/thinca/vim-quickrun/"; }; @@ -8179,12 +8300,12 @@ final: prev: vim-rooter = buildVimPluginFrom2Nix { pname = "vim-rooter"; - version = "2021-04-12"; + version = "2021-06-08"; src = fetchFromGitHub { owner = "airblade"; repo = "vim-rooter"; - rev = "662c00676abab9d7ce16bf9f202420bf86cc6554"; - sha256 = "1birkzysn8midk627zyp3pla51wmz4sp613gs5xxlms5imq4diaq"; + rev = "9a5ce8edc67cca36cc530ee27a805112ce7a7e9b"; + sha256 = "0zx1mzaiqwqyg7imahwy0mzp52b2dzp4qdnrsgcnkvkxf8v67bak"; }; meta.homepage = "https://github.com/airblade/vim-rooter/"; }; @@ -8203,12 +8324,12 @@ final: prev: vim-ruby = buildVimPluginFrom2Nix { pname = "vim-ruby"; - version = "2021-02-03"; + version = "2021-06-12"; src = fetchFromGitHub { owner = "vim-ruby"; repo = "vim-ruby"; - rev = "4788a08433c3c90e131fc7d110d82577e1234a86"; - sha256 = "1sq1li4s40xgy8ww4krsxqdqlwhcd9l67551iadccvsvjka16ynw"; + rev = "a006f67d18ce0ed6ff75c98b266eaa606dfcec30"; + sha256 = "0dhkyfignmcv9jwrszk37k7l8h2ivbv3krz5xwk17fbdd2y7jwz2"; }; meta.homepage = "https://github.com/vim-ruby/vim-ruby/"; }; @@ -8357,6 +8478,18 @@ final: prev: meta.homepage = "https://github.com/mhinz/vim-signify/"; }; + vim-simpledb = buildVimPluginFrom2Nix { + pname = "vim-simpledb"; + version = "2020-10-02"; + src = fetchFromGitHub { + owner = "ivalkeen"; + repo = "vim-simpledb"; + rev = "1e9e72160dd01c837b5afb4f75cbb587a15b31b5"; + sha256 = "1y0i876p2pxx7gbr04acnv94cjrincsbg03bqxr89xbqlbggxf0w"; + }; + meta.homepage = "https://github.com/ivalkeen/vim-simpledb/"; + }; + vim-slash = buildVimPluginFrom2Nix { pname = "vim-slash"; version = "2019-08-28"; @@ -8431,12 +8564,12 @@ final: prev: vim-smt2 = buildVimPluginFrom2Nix { pname = "vim-smt2"; - version = "2021-02-16"; + version = "2021-06-07"; src = fetchFromGitHub { owner = "bohlender"; repo = "vim-smt2"; - rev = "196d05f7152fb95c4613476368ebae9dd842d470"; - sha256 = "0lk9clnvrkjbxgszg52zdl28d313vk2fiyh86aa6xx5pr0nr9iw3"; + rev = "2cc8c80c0a88e0d47de85bef1d50df86e197c302"; + sha256 = "0djk8s8q4b72blw73r4m7z9gc15gys167xgnvd1avmfyfw8fb22a"; }; meta.homepage = "https://github.com/bohlender/vim-smt2/"; }; @@ -8467,12 +8600,12 @@ final: prev: vim-snippets = buildVimPluginFrom2Nix { pname = "vim-snippets"; - version = "2021-04-19"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "honza"; repo = "vim-snippets"; - rev = "2a28fc35f6848ad38681d4b509ae3f5962276b5d"; - sha256 = "05xywkyh809g7zax4wdw5vn29xcs1wg3ylbsdi9rz18phm6im41k"; + rev = "7bb2385aca2288845999c05d9eca83e2e8eaed90"; + sha256 = "0r41cd27dzfq4pnafr4an1zlafwmi7sa44w4yxmxyn7wky4rhf61"; }; meta.homepage = "https://github.com/honza/vim-snippets/"; }; @@ -8683,12 +8816,12 @@ final: prev: vim-terraform = buildVimPluginFrom2Nix { pname = "vim-terraform"; - version = "2021-05-08"; + version = "2021-06-09"; src = fetchFromGitHub { owner = "hashivim"; repo = "vim-terraform"; - rev = "9166d42e5dc9bc0ef7e1b9e93d52bb4c5b923560"; - sha256 = "1wr1sqxjy1dqyvkvii8jrxwagfph52z2ij8p1nz5b1kpyzvvpg7b"; + rev = "814a21db89f742c3ea492c69c5a2bfecded1aeb3"; + sha256 = "0acdq2m16mhm3g6n4saqf9fljz5qfdalw88h126z2f6mm731y6pi"; }; meta.homepage = "https://github.com/hashivim/vim-terraform/"; }; @@ -8708,12 +8841,12 @@ final: prev: vim-test = buildVimPluginFrom2Nix { pname = "vim-test"; - version = "2021-05-24"; + version = "2021-06-17"; src = fetchFromGitHub { owner = "vim-test"; repo = "vim-test"; - rev = "4eb72005f87ff1bf3bc7e523b176bd6b391f6e24"; - sha256 = "1m42skcd6mn6gp5a6wrjg9zxsbdqa1qbg4d998js5chiwv2ajq4k"; + rev = "237c463f40f7b7fe2e4e01518e62bfc00c85ff32"; + sha256 = "1v5kfccjls8bi7h3gs1nq5h68n6d2wc79hqrwkvlvbp2sqwmvrz3"; }; meta.homepage = "https://github.com/vim-test/vim-test/"; }; @@ -8876,12 +9009,12 @@ final: prev: vim-tpipeline = buildVimPluginFrom2Nix { pname = "vim-tpipeline"; - version = "2021-06-03"; + version = "2021-06-19"; src = fetchFromGitHub { owner = "vimpostor"; repo = "vim-tpipeline"; - rev = "683cf4f2e16149c477a8f5c96b7429932a68d801"; - sha256 = "0gr5k4bzzzvn00plimpkjiavya04jvcgg322k8yblzmm01r6vcr2"; + rev = "a40b618746bb60ddf3a664e65f82ffa4750d450a"; + sha256 = "1pxnsxixdjpmndqi1cl0lp54mh4zidx40lshpdvmk3fjpjdjd130"; }; meta.homepage = "https://github.com/vimpostor/vim-tpipeline/"; }; @@ -8936,16 +9069,28 @@ final: prev: vim-ultest = buildVimPluginFrom2Nix { pname = "vim-ultest"; - version = "2021-06-04"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "rcarriga"; repo = "vim-ultest"; - rev = "17e372f83238d5d85f6574c59d5d210a898e8623"; - sha256 = "084mn6zxc2x8gp938fpi5ylwqy2pgvn046xbsmyq8md36vqb6m7g"; + rev = "eaa0eeaaa2bcc8f4400a7d2e8ff56cf1141074e4"; + sha256 = "148yy7f88jvavz8n0r2lfjn51bfdi2pbs192srf82kikmfg0lxk7"; }; meta.homepage = "https://github.com/rcarriga/vim-ultest/"; }; + vim-unicoder = buildVimPluginFrom2Nix { + pname = "vim-unicoder"; + version = "2019-04-16"; + src = fetchFromGitHub { + owner = "arthurxavierx"; + repo = "vim-unicoder"; + rev = "a71fc3670f9337c56806fa9e8e97b7ea09fd5e39"; + sha256 = "1kcnxx909pdvrvk0kyz3h8f9szn6hmalm8qyakq3pv6dknlkwb0b"; + }; + meta.homepage = "https://github.com/arthurxavierx/vim-unicoder/"; + }; + vim-unimpaired = buildVimPluginFrom2Nix { pname = "vim-unimpaired"; version = "2020-04-26"; @@ -8996,12 +9141,12 @@ final: prev: vim-visual-multi = buildVimPluginFrom2Nix { pname = "vim-visual-multi"; - version = "2021-06-01"; + version = "2021-06-22"; src = fetchFromGitHub { owner = "mg979"; repo = "vim-visual-multi"; - rev = "2b9d104c57aeb612d7f00e1d071d712ed8671949"; - sha256 = "17f92pka2flwnhx8yg7skbp8kyhbb6gmvm0mni2jm7w3iq68nbmw"; + rev = "929703f069c7078e0c41efb5a260421347ce083a"; + sha256 = "05ky5l3yadp3whbi2a2i38rq620m51r2xi86q80z11a99j5q6ff5"; }; meta.homepage = "https://github.com/mg979/vim-visual-multi/"; }; @@ -9152,12 +9297,12 @@ final: prev: vim-xtabline = buildVimPluginFrom2Nix { pname = "vim-xtabline"; - version = "2021-05-29"; + version = "2021-06-10"; src = fetchFromGitHub { owner = "mg979"; repo = "vim-xtabline"; - rev = "ad80aa67958a31a254d8994c7a517c1123256721"; - sha256 = "07pd7wzyvch400i6kv0ld3bx2x90ycdjaapwc7aaqkwikk2slq3h"; + rev = "1dbf84a3095eff9bd0d1e49824dddac56c378ed9"; + sha256 = "16qwp8kk3c2lzfnmzkzi71ilrcssga17kjiphskph5kl35igr16v"; }; meta.homepage = "https://github.com/mg979/vim-xtabline/"; }; @@ -9344,12 +9489,12 @@ final: prev: vimspector = buildVimPluginFrom2Nix { pname = "vimspector"; - version = "2021-05-25"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "puremourning"; repo = "vimspector"; - rev = "a51b8b23c9b7e12c2899e423037458d46dbe196e"; - sha256 = "0w49lgmg880pzblwwkkrp24pyvd8dkjbqvsx9m6n3x5n4zmz1c1f"; + rev = "aa0cddc0da5b2547d20551dcffe1d9dc073b3904"; + sha256 = "0niv2aa294ay0ifksg5ymrslbj9l6sxypyi3pnmgiigqj8m61yzs"; fetchSubmodules = true; }; meta.homepage = "https://github.com/puremourning/vimspector/"; @@ -9357,12 +9502,12 @@ final: prev: vimtex = buildVimPluginFrom2Nix { pname = "vimtex"; - version = "2021-06-01"; + version = "2021-06-25"; src = fetchFromGitHub { owner = "lervag"; repo = "vimtex"; - rev = "b0d430b80504e847584664d83e879399647cd38f"; - sha256 = "0k44iv5fig0601bc1vglgbphiw0h6gq8379zsk1ca3fgzyi2ic0p"; + rev = "78789f5c9e73d7b66f87104544d521333b09a33b"; + sha256 = "1rrblrip8xa1wxp8kj0kjry63n4pbja4fnnjbvw07bnihr6igjx1"; }; meta.homepage = "https://github.com/lervag/vimtex/"; }; @@ -9405,12 +9550,12 @@ final: prev: vista-vim = buildVimPluginFrom2Nix { pname = "vista-vim"; - version = "2021-05-28"; + version = "2021-06-16"; src = fetchFromGitHub { owner = "liuchengxu"; repo = "vista.vim"; - rev = "19cad968d2cd759e7f9de1d662ec680bd93ebebc"; - sha256 = "0r01b6mml6qgyybi6i59bflgqi03w0fnl0wfgwac96ixs2wdvl1l"; + rev = "d709462958f2167008c9653a9cbc9de1067bfa2d"; + sha256 = "1fq4ah4jzfddg2w7n1sy9fjfy6z9ab3jslfx48n991i0kwbw4vp0"; }; meta.homepage = "https://github.com/liuchengxu/vista.vim/"; }; @@ -9453,12 +9598,12 @@ final: prev: which-key-nvim = buildVimPluginFrom2Nix { pname = "which-key-nvim"; - version = "2021-06-04"; + version = "2021-06-26"; src = fetchFromGitHub { owner = "folke"; repo = "which-key.nvim"; - rev = "9ea98e59ddeeafc9181815dd714bea513b298e33"; - sha256 = "0zhlbbd969p4bg5vrifsi5sgqi2wbp8zxlak3l7zk67akpbb395n"; + rev = "e0dce1552ea37964ae6ac7144709867544eae7f3"; + sha256 = "16xwpds1d1dc5p2rz17yqiyr0a844kqj5gnxwnrk2l56fhrhq8xx"; }; meta.homepage = "https://github.com/folke/which-key.nvim/"; }; @@ -9635,12 +9780,12 @@ final: prev: zig-vim = buildVimPluginFrom2Nix { pname = "zig-vim"; - version = "2021-05-12"; + version = "2021-06-24"; src = fetchFromGitHub { owner = "ziglang"; repo = "zig.vim"; - rev = "9ec189bc76ed2850f916394ed8d6127290f51338"; - sha256 = "0xl2pxgmam5ls7a59bdvx3gyzcgsq3wvgby2c5667627kcq05j6s"; + rev = "fb534e7d12be7e529f79ad5ab99c08dc99f53294"; + sha256 = "17dpkkgazrzym2yqhb6r07y3hxl3hq9yzwkrb1zii94ss4d8lhw9"; }; meta.homepage = "https://github.com/ziglang/zig.vim/"; }; diff --git a/third_party/nixpkgs/pkgs/misc/vim-plugins/overrides.nix b/third_party/nixpkgs/pkgs/misc/vim-plugins/overrides.nix index 8618d2c506..0901531a8a 100644 --- a/third_party/nixpkgs/pkgs/misc/vim-plugins/overrides.nix +++ b/third_party/nixpkgs/pkgs/misc/vim-plugins/overrides.nix @@ -208,7 +208,7 @@ self: super: { }); ensime-vim = super.ensime-vim.overrideAttrs (old: { - passthru.python3Dependencies = ps: with ps; [ sexpdata websocket_client ]; + passthru.python3Dependencies = ps: with ps; [ sexpdata websocket-client ]; dependencies = with self; [ vimproc-vim vimshell-vim self.self forms ]; }); @@ -621,7 +621,7 @@ self: super: { libiconv ]; - cargoSha256 = "16fhiv6qmf7dv968jyybkgs1wkphy383s78g8w5wnz4i0czld8dq"; + cargoSha256 = "sha256-IKSnXNFdtykuajOxpw5CYsw2q/mkVLkRtPC49hiXsPc="; }; in '' @@ -755,6 +755,10 @@ self: super: { dependencies = with self; [ vim-addon-mw-utils tlib_vim ]; }); + vim-speeddating = super.vim-speeddating.overrideAttrs (old: { + dependencies = with self; [ vim-repeat ]; + }); + vim-stylish-haskell = super.vim-stylish-haskell.overrideAttrs (old: { postPatch = old.postPatch or "" + '' substituteInPlace ftplugin/haskell/stylish-haskell.vim --replace \ @@ -763,6 +767,14 @@ self: super: { ''; }); + vim-surround = super.vim-surround.overrideAttrs (old: { + dependencies = with self; [ vim-repeat ]; + }); + + vim-unimpaired = super.vim-unimpaired.overrideAttrs (old: { + dependencies = with self; [ vim-repeat ]; + }); + vim-wakatime = super.vim-wakatime.overrideAttrs (old: { buildInputs = [ python ]; }); diff --git a/third_party/nixpkgs/pkgs/misc/vim-plugins/vim-plugin-names b/third_party/nixpkgs/pkgs/misc/vim-plugins/vim-plugin-names index 9d150c93c7..22adf1de60 100644 --- a/third_party/nixpkgs/pkgs/misc/vim-plugins/vim-plugin-names +++ b/third_party/nixpkgs/pkgs/misc/vim-plugins/vim-plugin-names @@ -20,11 +20,13 @@ AndrewRadev/sideways.vim@main AndrewRadev/splitjoin.vim@main andsild/peskcolor.vim andviro/flake8-vim +andweeb/presence.nvim@main andymass/vim-matchup andys8/vim-elm-syntax antoinemadec/coc-fzf ap/vim-css-color arcticicestudio/nord-vim +arthurxavierx/vim-unicoder artur-shaik/vim-javacomplete2 autozimu/LanguageClient-neovim axelf4/vim-strip-trailing-whitespace @@ -45,6 +47,7 @@ bronson/vim-trailing-whitespace brooth/far.vim buoto/gotests-vim camspiers/lens.vim +camspiers/snap@main carlitux/deoplete-ternjs ccarpita/rtorrent-syntax-file cespare/vim-toml @@ -70,6 +73,7 @@ cloudhead/neovim-fuzzy CoatiSoftware/vim-sourcetrail cocopon/iceberg.vim cohama/lexima.vim +ConradIrwin/vim-bracketed-paste crusoexia/vim-monokai ctjhoa/spacevim ctrlpvim/ctrlp.vim @@ -155,8 +159,10 @@ gennaro-tedesco/nvim-peekup gentoo/gentoo-syntax GEverding/vim-hocon gfanto/fzf-lsp.nvim@main +ggandor/lightspeed.nvim@main gibiansky/vim-textobj-haskell gioele/vim-autoswap +gleam-lang/gleam.vim glepnir/dashboard-nvim glepnir/galaxyline.nvim@main glepnir/lspsaga.nvim@main @@ -214,6 +220,7 @@ itchyny/thumbnail.vim itchyny/vim-cursorword itchyny/vim-gitbranch itspriddle/vim-shellcheck +ivalkeen/vim-simpledb ivanov/vim-ipython jackguo380/vim-lsp-cxx-highlight jacoborus/tender.vim @@ -294,6 +301,7 @@ kevinhwang91/rnvimr@main kien/rainbow_parentheses.vim knubie/vim-kitty-navigator konfekt/fastfold +Konfekt/vim-alias konfekt/vim-DetectSpellLang kosayoda/nvim-lightbulb kristijanhusak/defx-git @@ -306,6 +314,7 @@ kristijanhusak/vim-hybrid-material kshenoy/vim-signature kyazdani42/nvim-tree.lua kyazdani42/nvim-web-devicons +l3mon4d3/luasnip lambdalisue/fern.vim lambdalisue/gina.vim lambdalisue/suda.vim @@ -385,6 +394,7 @@ mfussenegger/nvim-dap mfussenegger/nvim-jdtls mg979/vim-visual-multi mg979/vim-xtabline +mhartington/formatter.nvim mhartington/oceanic-next mhinz/vim-crates mhinz/vim-grepper @@ -577,6 +587,7 @@ SevereOverfl0w/deoplete-github shaunsingh/moonlight.nvim@pure-lua shaunsingh/nord.nvim sheerun/vim-polyglot +shinchu/lightline-gruvbox.vim Shougo/context_filetype.vim Shougo/defx.nvim Shougo/denite.nvim @@ -716,6 +727,7 @@ urbit/hoon.vim Valloric/MatchTagAlways Valodim/deoplete-notmuch vhda/verilog_systemverilog.vim +vhyrro/neorg@main vigoux/LanguageTool.nvim vim-airline/vim-airline vim-airline/vim-airline-themes diff --git a/third_party/nixpkgs/pkgs/misc/vim-plugins/vim-utils.nix b/third_party/nixpkgs/pkgs/misc/vim-plugins/vim-utils.nix index 52bf4341fa..5ca3aef235 100644 --- a/third_party/nixpkgs/pkgs/misc/vim-plugins/vim-utils.nix +++ b/third_party/nixpkgs/pkgs/misc/vim-plugins/vim-utils.nix @@ -184,7 +184,7 @@ let rtpPath = "share/vim-plugins"; - nativeImpl = packages: lib.optionalString (packages != null) + nativeImpl = packages: (let link = (packageName: dir: pluginPath: "ln -sf ${pluginPath}/share/vim-plugins/* $out/pack/${packageName}/${dir}"); packageLinks = (packageName: {start ? [], opt ? []}: @@ -340,11 +340,11 @@ let entries = [ beforePlugins vamImpl - (nativeImpl packages) - customRC ] + ++ lib.optional (packages != null && packages != []) (nativeImpl packages) ++ lib.optional (pathogen != null) pathogenImpl - ++ lib.optional (plug != null) plugImpl; + ++ lib.optional (plug != null) plugImpl + ++ [ customRC ]; in lib.concatStringsSep "\n" (lib.filter (x: x != null && x != "") entries); diff --git a/third_party/nixpkgs/pkgs/misc/vscode-extensions/default.nix b/third_party/nixpkgs/pkgs/misc/vscode-extensions/default.nix index 4e7713bdc5..19b816fbc7 100644 --- a/third_party/nixpkgs/pkgs/misc/vscode-extensions/default.nix +++ b/third_party/nixpkgs/pkgs/misc/vscode-extensions/default.nix @@ -1,4 +1,4 @@ -{ config, lib, buildEnv, callPackage, vscode-utils, nodePackages, jdk, llvmPackages_8 }: +{ config, lib, buildEnv, callPackage, vscode-utils, asciidoctor, nodePackages, jdk, llvmPackages_8, nixpkgs-fmt, jq, shellcheck }: let inherit (vscode-utils) buildVscodeMarketplaceExtension; @@ -12,6 +12,19 @@ let # baseExtensions = self: lib.mapAttrs (_n: lib.recurseIntoAttrs) { + _4ops.terraform = buildVscodeMarketplaceExtension { + mktplcRef = { + publisher = "4ops"; + name = "terraform"; + version = "0.2.1"; + sha256 = "196026a89pizj8p0hqdgkyllj2spx2qwpynsaqjq17s8v15vk5dg"; + }; + meta = { + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ kamadorueda ]; + }; + }; + a5huynh.vscode-ron = buildVscodeMarketplaceExtension { mktplcRef = { name = "vscode-ron"; @@ -84,6 +97,40 @@ let }; }; + arrterian.nix-env-selector = buildVscodeMarketplaceExtension { + mktplcRef = { + name = "nix-env-selector"; + publisher = "arrterian"; + version = "1.0.7"; + sha256 = "0e76885c9dbb6dca4eac8a75866ec372b948cc64a3a3845327d7c3ef6ba42a57"; + }; + meta = { + license = lib.licenses.mit; + }; + }; + + asciidoctor.asciidoctor-vscode = buildVscodeMarketplaceExtension { + mktplcRef = { + name = "asciidoctor-vscode"; + publisher = "asciidoctor"; + version = "2.8.9"; + sha256 = "1xkxx5i3nhd0dzqhhdmx0li5jifsgfhv0p5h7xwsscz3gzgsdcyb"; + }; + + postPatch = '' + substituteInPlace dist/src/text-parser.js \ + --replace "get('asciidoctor_command', 'asciidoctor')" \ + "get('asciidoctor_command', '${asciidoctor}/bin/asciidoctor')" + substituteInPlace dist/src/commands/exportAsPDF.js \ + --replace "get('asciidoctorpdf_command', 'asciidoctor-pdf')" \ + "get('asciidoctorpdf_command', '${asciidoctor}/bin/asciidoctor-pdf')" + ''; + + meta = with lib; { + license = licenses.mit; + }; + }; + ms-python.vscode-pylance = buildVscodeMarketplaceExtension { mktplcRef = { name = "vscode-pylance"; @@ -99,13 +146,20 @@ let }; }; - B4dM4n.vscode-nixpkgs-fmt = buildVscodeMarketplaceExtension { + b4dm4n.vscode-nixpkgs-fmt = buildVscodeMarketplaceExtension { mktplcRef = { name = "nixpkgs-fmt"; publisher = "B4dM4n"; version = "0.0.1"; sha256 = "sha256-vz2kU36B1xkLci2QwLpl/SBEhfSWltIDJ1r7SorHcr8="; }; + nativeBuildInputs = [ jq ]; + postInstall = '' + cd "$out/$installPrefix" + tmp_package_json=$(mktemp) + jq '.contributes.configuration.properties."nixpkgs-fmt.path".default = "${nixpkgs-fmt}/bin/nixpkgs-fmt"' package.json > "$tmp_package_json" + mv "$tmp_package_json" package.json + ''; meta = with lib; { license = licenses.mit; }; @@ -224,6 +278,19 @@ let }; }; + coolbear.systemd-unit-file = buildVscodeMarketplaceExtension { + mktplcRef = { + publisher = "coolbear"; + name = "systemd-unit-file"; + version = "1.0.6"; + sha256 = "0sc0zsdnxi4wfdlmaqwb6k2qc21dgwx6ipvri36x7agk7m8m4736"; + }; + meta = { + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ kamadorueda ]; + }; + }; + dbaeumer.vscode-eslint = buildVscodeMarketplaceExtension { mktplcRef = { name = "vscode-eslint"; @@ -240,8 +307,8 @@ let mktplcRef = { name = "vscode-markdownlint"; publisher = "DavidAnson"; - version = "0.38.0"; - sha256 = "0d6hbsjrx1j8wrmfnvdwsa7sci1brplgxwkmy6sp74va7zxfjnqv"; + version = "0.42.1"; + sha256 = "c8c0647e0dd786fe68becca6dc73eade5f4220a26ab9faff8dd813a14b25df51"; }; meta = with lib; { license = licenses.mit; @@ -319,11 +386,21 @@ let mktplcRef = { name = "gitlens"; publisher = "eamodio"; - version = "11.1.3"; - sha256 = "sha256-hqJg3jP4bbXU4qSJOjeKfjkPx61yPDMsQdSUVZObK/U="; + version = "11.5.1"; + sha256 = "sha256-Ic7eT8WX2GDYIj/aTu1d4m+fgPtXe4YQx04G0awbwnM="; }; - meta = { - license = lib.licenses.mit; + meta = with lib; { + changelog = "https://marketplace.visualstudio.com/items/eamodio.gitlens/changelog"; + description = "GitLens supercharges the Git capabilities built into Visual Studio Code."; + longDescription = '' + Supercharge the Git capabilities built into Visual Studio Code — Visualize code authorship at a glance via Git + blame annotations and code lens, seamlessly navigate and explore Git repositories, gain valuable insights via + powerful comparison commands, and so much more + ''; + downloadPage = "https://marketplace.visualstudio.com/items?itemName=eamodio.gitlens"; + homepage = "https://gitlens.amod.io/"; + license = licenses.mit; + maintainers = with maintainers; [ ratsclub ]; }; }; @@ -419,6 +496,23 @@ let }; }; + foam.foam-vscode = buildVscodeMarketplaceExtension { + meta = with lib; { + changelog = "https://marketplace.visualstudio.com/items/foam.foam-vscode/changelog"; + description = "A personal knowledge management and sharing system for VSCode "; + downloadPage = "https://marketplace.visualstudio.com/items?itemName=foam.foam-vscode"; + homepage = "https://foambubble.github.io/"; + license = licenses.mit; + maintainers = with maintainers; [ ratsclub ]; + }; + mktplcRef = { + name = "foam-vscode"; + publisher = "foam"; + version = "0.13.7"; + sha256 = "Y2pcd4iXPiuhJdD/9d+tbTJN18O4+kRMqUdOtbx8xy8="; + }; + }; + formulahendry.auto-close-tag = buildVscodeMarketplaceExtension { mktplcRef = { name = "auto-close-tag"; @@ -487,6 +581,19 @@ let }; }; + jkillian.custom-local-formatters = buildVscodeMarketplaceExtension { + mktplcRef = { + publisher = "jkillian"; + name = "custom-local-formatters"; + version = "0.0.4"; + sha256 = "1pmqnc759fq86g2z3scx5xqpni9khcqi5z2kpl1kb7yygsv314gm"; + }; + meta = { + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ kamadorueda ]; + }; + }; + github = { github-vscode-theme = buildVscodeMarketplaceExtension { mktplcRef = { @@ -520,8 +627,8 @@ let mktplcRef = { name = "Go"; publisher = "golang"; - version = "0.18.1"; - sha256 = "sha256-b2Wa3TULQQnBm1/xnDCB9SZjE+Wxz5wBttjDEtf8qlE="; + version = "0.25.1"; + sha256 = "sha256-ZDUWN9lzDnR77W7xcMFQaaFl/6Lf/x1jgaBkwZPqGGw="; }; meta = { license = lib.licenses.mit; @@ -607,7 +714,24 @@ let }; }; - JakeBecker.elixir-ls = buildVscodeMarketplaceExtension { + ionide.ionide-fsharp = buildVscodeMarketplaceExtension { + mktplcRef = { + name = "Ionide-fsharp"; + publisher = "Ionide"; + version = "5.5.5"; + sha256 = "xrBNiIbZVJ0sGUk/4PudD8kSyX94QkrFtf7Ho/sB0Vs="; + }; + meta = with lib; { + changelog = "https://marketplace.visualstudio.com/items/Ionide.Ionide-fsharp/changelog"; + description = "Enhanced F# Language Features for Visual Studio Code"; + downloadPage = "https://marketplace.visualstudio.com/items?itemName=Ionide.Ionide-fsharp"; + homepage = "https://ionide.io"; + license = licenses.mit; + maintainers = with maintainers; [ ratsclub ]; + }; + }; + + jakebecker.elixir-ls = buildVscodeMarketplaceExtension { mktplcRef = { name = "elixir-ls"; publisher = "JakeBecker"; @@ -660,6 +784,18 @@ let }; }; + johnpapa.vscode-peacock = buildVscodeMarketplaceExtension { + mktplcRef = { + name = "vscode-peacock"; + publisher = "johnpapa"; + version = "3.9.1"; + sha256 = "1g7apzzgfm8s9sjavhwr8jpf9slhq8b9jfkww3q5n41mzzx8m94p"; + }; + meta = with lib; { + license = licenses.mit; + }; + }; + jpoissonnier.vscode-styled-components = buildVscodeMarketplaceExtension { mktplcRef = { name = "vscode-styled-components"; @@ -688,14 +824,27 @@ let mktplcRef = { name = "magit"; publisher = "kahole"; - version = "0.6.13"; - sha256 = "sha256-/SeGQV0UEqBk69cAmUXFc/OfPxNssvzZqa7NmAMQD1k="; + version = "0.6.15"; + sha256 = "sha256-fRXm70FXnHduoywI4YC9ya6/J7wyd6EBzbnrcijBIbA="; }; meta = { license = lib.licenses.mit; }; }; + mads-hartmann.bash-ide-vscode = buildVscodeMarketplaceExtension { + mktplcRef = { + publisher = "mads-hartmann"; + name = "bash-ide-vscode"; + version = "1.11.0"; + sha256 = "1hq41fy2v1grjrw77mbs9k6ps6gncwlydm03ipawjnsinxc9rdkp"; + }; + meta = { + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ kamadorueda ]; + }; + }; + mikestead.dotenv = buildVscodeMarketplaceExtension { mktplcRef = { name = "dotenv"; @@ -774,16 +923,9 @@ let ms-vscode-remote.remote-ssh = callPackage ./remote-ssh { }; - ms-python.python = - let - raw-package = callPackage ./python { - extractNuGet = callPackage ./python/extract-nuget.nix { }; - }; - in - buildEnv { - name = "vscode-extension-ms-python-python-full"; - paths = [ raw-package self.ms-toolsai.jupyter ]; - }; + ms-python.python = callPackage ./python { + extractNuGet = callPackage ./python/extract-nuget.nix { }; + }; msjsdiag.debugger-for-chrome = buildVscodeMarketplaceExtension { mktplcRef = { @@ -821,6 +963,18 @@ let }; }; + octref.vetur = buildVscodeMarketplaceExtension { + mktplcRef = { + name = "vetur"; + publisher = "octref"; + version = "0.34.1"; + sha256 = "09w3bik1mxs7qac67wgrc58vl98ham3syrn2anycpwd7135wlpby"; + }; + meta = { + license = lib.licenses.mit; + }; + }; + redhat.java = buildVscodeMarketplaceExtension { mktplcRef = { name = "java"; @@ -950,6 +1104,18 @@ let }; }; + shardulm94.trailing-spaces = buildVscodeMarketplaceExtension { + mktplcRef = { + publisher = "shardulm94"; + name = "trailing-spaces"; + version = "0.3.1"; + sha256 = "0h30zmg5rq7cv7kjdr5yzqkkc1bs20d72yz9rjqag32gwf46s8b8"; + }; + meta = { + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ kamadorueda ]; + }; + }; shyykoserhiy.vscode-spotify = buildVscodeMarketplaceExtension { mktplcRef = { @@ -1040,6 +1206,23 @@ let }; }; + svsool.markdown-memo = buildVscodeMarketplaceExtension { + mktplcRef = { + name = "markdown-memo"; + publisher = "svsool"; + version = "0.3.8"; + sha256 = "eFiCCXxrOnXwJK1AOMfIDsPGsFG3ArLD1X/uAEH5lRY="; + }; + meta = with lib; { + changelog = "https://marketplace.visualstudio.com/items/svsool.markdown-memo/changelog"; + description = "Markdown knowledge base with bidirectional [[link]]s built on top of VSCode"; + downloadPage = "https://marketplace.visualstudio.com/items?itemName=svsool.markdown-memo"; + homepage = "https://github.com/svsool/vscode-memo"; + license = licenses.mit; + maintainers = with maintainers; [ ratsclub ]; + }; + }; + tamasfe.even-better-toml = buildVscodeMarketplaceExtension { mktplcRef = { name = "even-better-toml"; @@ -1069,9 +1252,16 @@ let mktplcRef = { name = "shellcheck"; publisher = "timonwong"; - version = "0.12.3"; - sha256 = "1i9rszgnac2z1kyahmgxmz05ib7z14s458fvvjlzmvl64fa1fdvf"; + version = "0.14.1"; + sha256 = "sha256-X3ihMxANcqNLWl9oTZjCgwRt1uBsSN2BmC2D4dPRFLE="; }; + nativeBuildInputs = [ jq ]; + postInstall = '' + cd "$out/$installPrefix" + tmp_package_json=$(mktemp) + jq '.contributes.configuration.properties."shellcheck.executablePath".default = "${shellcheck}/bin/shellcheck"' package.json > "$tmp_package_json" + mv "$tmp_package_json" package.json + ''; meta = { license = lib.licenses.mit; }; @@ -1141,7 +1331,7 @@ let }; }; - VSpaceCode.vspacecode = buildVscodeMarketplaceExtension { + vspacecode.vspacecode = buildVscodeMarketplaceExtension { mktplcRef = { name = "vspacecode"; publisher = "VSpaceCode"; @@ -1153,7 +1343,7 @@ let }; }; - VSpaceCode.whichkey = buildVscodeMarketplaceExtension { + vspacecode.whichkey = buildVscodeMarketplaceExtension { mktplcRef = { name = "whichkey"; publisher = "VSpaceCode"; @@ -1165,6 +1355,18 @@ let }; }; + wix.vscode-import-cost = buildVscodeMarketplaceExtension { + mktplcRef = { + name = "vscode-import-cost"; + publisher = "wix"; + version = "2.15.0"; + sha256 = "0d3b6654cdck1syn74vmmd1jmgkrw5v4c4cyrhdxbhggkip732bc"; + }; + meta = with lib; { + license = licenses.mit; + }; + }; + xaver.clang-format = buildVscodeMarketplaceExtension { mktplcRef = { name = "clang-format"; diff --git a/third_party/nixpkgs/pkgs/misc/vscode-extensions/ms-vsliveshare-vsliveshare/default.nix b/third_party/nixpkgs/pkgs/misc/vscode-extensions/ms-vsliveshare-vsliveshare/default.nix index eb215d0fd2..8ccf18171c 100644 --- a/third_party/nixpkgs/pkgs/misc/vscode-extensions/ms-vsliveshare-vsliveshare/default.nix +++ b/third_party/nixpkgs/pkgs/misc/vscode-extensions/ms-vsliveshare-vsliveshare/default.nix @@ -38,8 +38,8 @@ in ((vscode-utils.override { stdenv = gccStdenv; }).buildVscodeMarketplaceExtens mktplcRef = { name = "vsliveshare"; publisher = "ms-vsliveshare"; - version = "1.0.4272"; - sha256 = "kH8ZiNzpAfR1BnKjYc+hcNMEmhBNyHlnOlj8fCdNGjY="; + version = "1.0.4419"; + sha256 = "1r2xp8ggcrfsf4yzxjiss3hprk4dw7nchwxy920yn2iglvkaalsh"; }; }).overrideAttrs({ nativeBuildInputs ? [], buildInputs ? [], ... }: { nativeBuildInputs = nativeBuildInputs ++ [ diff --git a/third_party/nixpkgs/pkgs/misc/vscode-extensions/rust-analyzer/build-deps/package.json b/third_party/nixpkgs/pkgs/misc/vscode-extensions/rust-analyzer/build-deps/package.json index ece623b53c..20dd6593ab 100644 --- a/third_party/nixpkgs/pkgs/misc/vscode-extensions/rust-analyzer/build-deps/package.json +++ b/third_party/nixpkgs/pkgs/misc/vscode-extensions/rust-analyzer/build-deps/package.json @@ -21,7 +21,7 @@ "tslib": "^2.0.3", "typescript": "^4.1.2", "typescript-formatter": "^7.2.2", - "vsce": "^1.85.0", + "vsce": "=1.88.0", "vscode-test": "^1.5.1" } } diff --git a/third_party/nixpkgs/pkgs/misc/vscode-extensions/terraform/default.nix b/third_party/nixpkgs/pkgs/misc/vscode-extensions/terraform/default.nix index 44e2bdb100..658495296b 100644 --- a/third_party/nixpkgs/pkgs/misc/vscode-extensions/terraform/default.nix +++ b/third_party/nixpkgs/pkgs/misc/vscode-extensions/terraform/default.nix @@ -3,13 +3,13 @@ vscode-utils.buildVscodeMarketplaceExtension rec { mktplcRef = { name = "terraform"; publisher = "hashicorp"; - version = "2.11.0"; + version = "2.13.0"; }; vsix = fetchurl { name = "${mktplcRef.publisher}-${mktplcRef.name}.zip"; url = "https://github.com/hashicorp/vscode-terraform/releases/download/v${mktplcRef.version}/${mktplcRef.name}-${mktplcRef.version}.vsix"; - sha256 = "0wqdya353b415qxs8jczmis3q6d8fddv1pdd8jdd0w64s1ibv3sy"; + sha256 = "1wc4jl4h3ja4ivynf20yxzwqssi6yd7alvqvcjrkksic98480qcz"; }; patches = [ ./fix-terraform-ls.patch ]; diff --git a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/build-deps/package.json b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/build-deps/package.json index 188fa67ede..86d7b1aa6f 100644 --- a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/build-deps/package.json +++ b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/build-deps/package.json @@ -1,6 +1,6 @@ { "name": "vscode-lldb", - "version": "1.6.1", + "version": "1.6.5", "dependencies": { "string-argv": "^0.3.1", "yaml": "^1.10.0", @@ -9,16 +9,15 @@ "@types/node": "^8.10.50", "@types/mocha": "^7.0.1", "@types/yauzl": "^2.9.0", - "@types/json5": "^0.0.30", - "typescript": "^3.7.0", - "mocha": "^7.0.1", + "typescript": "^4.2.4", + "mocha": "^8.4.0", "source-map-support": "^0.5.12", "memory-streams": "^0.1.3", - "vscode-debugprotocol": "^1.35.0", - "vscode-debugadapter-testsupport": "^1.35.0", - "vsce": "^1.73.0", - "webpack": "^4.39.1", - "webpack-cli": "^3.3.7", - "ts-loader": "^6.2.1" + "vscode-debugprotocol": "^1.47.0", + "vscode-debugadapter-testsupport": "^1.47.0", + "vsce": "=1.88.0", + "webpack": "^5.37.1", + "webpack-cli": "^4.7.0", + "ts-loader": "^8.0.0" } } diff --git a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/cmake-build-extension-only.patch b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/cmake-build-extension-only.patch index 30ab3f9b21..fb55816b94 100644 --- a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/cmake-build-extension-only.patch +++ b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/cmake-build-extension-only.patch @@ -1,11 +1,11 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt -index 890abd4..157a8a1 100644 +index 37745b5..cad11a0 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -16,13 +16,6 @@ endif() set(VERSION "${VERSION}${VERSION_SUFFIX}") message("Version ${VERSION}") - + -set(LLDB_PACKAGE $ENV{LLDB_PACKAGE} CACHE PATH "Zip archive containing LLDB files") -if (LLDB_PACKAGE) - message("Using LLDB_PACKAGE=${LLDB_PACKAGE}") @@ -14,15 +14,15 @@ index 890abd4..157a8a1 100644 -endif() - set(TEST_TIMEOUT 5000 CACHE STRING "Test timeout [ms]") - + # General OS-specific definitions @@ -87,16 +80,6 @@ configure_file(package.json ${CMAKE_CURRENT_BINARY_DIR}/package.json @ONLY) configure_file(webpack.config.js ${CMAKE_CURRENT_BINARY_DIR}/webpack.config.js @ONLY) file(COPY ${CMAKE_CURRENT_SOURCE_DIR}/package-lock.json DESTINATION ${CMAKE_CURRENT_BINARY_DIR}) - + -# Run 'npm install' -execute_process( -- COMMAND ${NPM} install +- COMMAND ${NPM} ci # like install, but actually respects package-lock file. - WORKING_DIRECTORY ${CMAKE_BINARY_DIR} - RESULT_VARIABLE Result -) @@ -32,3 +32,5 @@ index 890abd4..157a8a1 100644 - # Copy it back, so we can commit the lock file. file(COPY ${CMAKE_CURRENT_BINARY_DIR}/package-lock.json DESTINATION ${CMAKE_CURRENT_SOURCE_DIR}) + + diff --git a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/default.nix b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/default.nix index 3ebb30fac6..0ef98818db 100644 --- a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/default.nix +++ b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/default.nix @@ -1,18 +1,19 @@ -{ lib, stdenv, fetchFromGitHub, rustPlatform, makeWrapper, jq, callPackage +{ lib, stdenv, fetchFromGitHub, rustPlatform, makeWrapper, callPackage , nodePackages, cmake, nodejs, unzip, python3 }: assert lib.versionAtLeast python3.version "3.5"; let publisher = "vadimcn"; pname = "vscode-lldb"; - version = "1.6.1"; + version = "1.6.5"; + + vscodeExtUniqueId = "${publisher}.${pname}"; src = fetchFromGitHub { owner = "vadimcn"; repo = "vscode-lldb"; rev = "v${version}"; - sha256 = "sha256-mi+AeHg9zO0vjF0OZCufPkliInqxTvDGV350wqAwe90="; - fetchSubmodules = true; + sha256 = "sha256-ppiEWFKJiUtlF8LSqBb8Xvg26B+wHcIZJhU+ANE4J2k="; }; lldb = callPackage ./lldb.nix {}; @@ -24,7 +25,7 @@ let # It will pollute the build environment of `buildRustPackage`. cargoPatches = [ ./reset-cargo-config.patch ]; - cargoSha256 = "sha256-vcL/nSGhyE0INQVWxEIpYwXmnOl1soBn+mymZr1FaSM="; + cargoSha256 = "sha256-ksRFlbtrFAbcX/Pc6rgWUHVl859GVUOvNckxM7Q971U="; nativeBuildInputs = [ makeWrapper ]; @@ -42,10 +43,10 @@ let nodeDeps = nodePackages."vscode-lldb-build-deps-../../misc/vscode-extensions/vscode-lldb/build-deps"; -in stdenv.mkDerivation rec { - name = "vscode-extension-${pname}"; - inherit src; - vscodeExtUniqueId = "${publisher}.${pname}"; +in stdenv.mkDerivation { + pname = "vscode-extension-${publisher}-${pname}"; + inherit src version vscodeExtUniqueId; + installPrefix = "share/vscode/extensions/${vscodeExtUniqueId}"; nativeBuildInputs = [ cmake nodejs unzip makeWrapper ]; @@ -71,8 +72,10 @@ in stdenv.mkDerivation rec { mkdir -p $ext/{adapter,formatters} mv -t $ext vsix-extracted/extension/* cp -t $ext/adapter ${adapter}/{bin,lib}/* ../adapter/*.py + wrapProgram $ext/adapter/codelldb \ + --set-default LLDB_DEBUGSERVER_PATH "${lldb.out}/bin/lldb-server" cp -t $ext/formatters ../formatters/*.py - ln -s ${lldb} $ext/lldb + ln -s ${lldb.lib} $ext/lldb # Mark that all components are installed. touch $ext/platform.ok @@ -80,7 +83,7 @@ in stdenv.mkDerivation rec { ''; # `adapter` will find python binary and libraries at runtime. - fixupPhase = '' + postFixup = '' wrapProgram $out/$installPrefix/adapter/codelldb \ --prefix PATH : "${python3}/bin" \ --prefix LD_LIBRARY_PATH : "${python3}/lib" diff --git a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/lldb.nix b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/lldb.nix index 2ec90b1931..e04e9ad0b5 100644 --- a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/lldb.nix +++ b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/lldb.nix @@ -1,13 +1,13 @@ # Patched lldb for Rust language support. -{ lldb_11, fetchFromGitHub }: +{ lldb_12, fetchFromGitHub }: let llvmSrc = fetchFromGitHub { owner = "vadimcn"; repo = "llvm-project"; - rev = "dd7efd9ea2d38e3227bc2e83a99772aceeb44242"; - sha256 = "sha256-XY8J8Ie1cWb6ok72Gju/KUxZ4fIFQVitYVnuCezGRKQ="; + rev = "f2e9ff34256cd8c6feaf14359f88ad3f538ed687"; + sha256 = "sha256-5UsCBu3rtt+l2HZiCswoQJPPh8T6y471TBF4AypdF9I="; }; -in lldb_11.overrideAttrs (oldAttrs: { +in lldb_12.overrideAttrs (oldAttrs: { src = "${llvmSrc}/lldb"; passthru = (oldAttrs.passthru or {}) // { diff --git a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/reset-cargo-config.patch b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/reset-cargo-config.patch index 300f8cd96e..e95df0a9ce 100644 --- a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/reset-cargo-config.patch +++ b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/reset-cargo-config.patch @@ -1,11 +1,19 @@ +diff --git a/.cargo/config b/.cargo/config +index c3c75e4..e69de29 100644 --- a/.cargo/config +++ b/.cargo/config -@@ -1,8 +0,0 @@ +@@ -1,14 +0,0 @@ -[build] -target-dir = "build/target" - -[target.armv7-unknown-linux-gnueabihf] --linker = "arm-linux-gnueabihf-gcc" +-rustflags = [ +- "-C", "link-arg=-fuse-ld=lld", +- "-C", "link-arg=--target=armv7-unknown-linux-gnueabihf", +-] - -[target.aarch64-unknown-linux-gnu] --linker = "aarch64-linux-gnu-gcc" +-rustflags = [ +- "-C", "link-arg=-fuse-ld=lld", +- "-C", "link-arg=--target=aarch64-unknown-linux-gnu", +-] diff --git a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/update.sh b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/update.sh index 0f3e407ddd..8511ea3b12 100755 --- a/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/update.sh +++ b/third_party/nixpkgs/pkgs/misc/vscode-extensions/vscode-lldb/update.sh @@ -20,7 +20,7 @@ version="$1" sed -E 's/\bversion = ".*?"/version = "'$version'"/' --in-place "$nixFile" srcHash=$(nix-prefetch fetchFromGitHub --owner vadimcn --repo vscode-lldb --rev "v$version" --fetchSubmodules) -sed -E 's/\bsha256 = ".*?"/sha256 = "'$srcHash'"/' --in-place "$nixFile" +sed -E 's#\bsha256 = ".*?"#sha256 = "'$srcHash'"#' --in-place "$nixFile" cargoHash=$(nix-prefetch "{ sha256 }: (import $nixpkgs {}).vscode-extensions.vadimcn.vscode-lldb.adapter.cargoDeps.overrideAttrs (_: { outputHash = sha256; })") sed -E 's#\bcargoSha256 = ".*?"#cargoSha256 = "'$cargoHash'"#' --in-place "$nixFile" @@ -30,6 +30,9 @@ jq '{ name, version: $version, dependencies: (.dependencies + .devDependencies) "$src/package.json" \ > build-deps/package.json +# FIXME: vsce@1.93.0 breaks the build. +sed 's/"vsce": ".*"/"vsce": "=1.88.0"/' --in-place build-deps/package.json + # Regenerate nodePackages. cd "$nixpkgs/pkgs/development/node-packages" exec ./generate.sh diff --git a/third_party/nixpkgs/pkgs/os-specific/bsd/netbsd/default.nix b/third_party/nixpkgs/pkgs/os-specific/bsd/netbsd/default.nix index 9e0b734c81..bb0984d973 100644 --- a/third_party/nixpkgs/pkgs/os-specific/bsd/netbsd/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/bsd/netbsd/default.nix @@ -67,6 +67,8 @@ in lib.makeScopeWithSplicing HOST_SH = stdenv'.shell; MACHINE_ARCH = { + i486 = "i386"; + i586 = "i386"; i686 = "i386"; }.${stdenv'.hostPlatform.parsed.cpu.name} or stdenv'.hostPlatform.parsed.cpu.name; @@ -74,6 +76,8 @@ in lib.makeScopeWithSplicing MACHINE = { x86_64 = "amd64"; aarch64 = "evbarm64"; + i486 = "i386"; + i586 = "i386"; i686 = "i386"; }.${stdenv'.hostPlatform.parsed.cpu.name} or stdenv'.hostPlatform.parsed.cpu.name; @@ -96,6 +100,8 @@ in lib.makeScopeWithSplicing HAVE_LLVM = lib.versions.major (lib.getVersion stdenv'.cc.cc); } // lib.optionalAttrs (stdenv'.cc.isGNU or false) { HAVE_GCC = lib.versions.major (lib.getVersion stdenv'.cc.cc); + } // lib.optionalAttrs (stdenv'.isx86_32) { + USE_SSP = "no"; } // lib.optionalAttrs (attrs.headersOnly or false) { installPhase = "includesPhase"; dontBuild = true; @@ -107,7 +113,7 @@ in lib.makeScopeWithSplicing makeMinimal = mkDerivation { path = "tools/make"; sha256 = "0fh0nrnk18m613m5blrliq2aydciv51qhc0ihsj4k63incwbk90n"; - version = "9.1"; + version = "9.2"; buildInputs = with self; []; nativeBuildInputs = with buildPackages.netbsd; [ bsdSetupHook ]; @@ -139,7 +145,7 @@ in lib.makeScopeWithSplicing }; compat = mkDerivation (let - version = "9.1"; + version = "9.2"; commonDeps = [ zlib ]; in { path = "tools/compat"; @@ -210,9 +216,9 @@ in lib.makeScopeWithSplicing --subst-var-by version ${version} ''; extraPaths = with self; [ include.src libc.src libutil.src - (fetchNetBSD "external/bsd/flex" "9.1" "0h98jpfj7vx5zh7vd7bk6b1hmzgkcb757a8j6d9zgygxxv13v43m") - (fetchNetBSD "sys/sys" "9.1" "1xx633pvmdgdb0h1x0bw1rvkc63h29ziwh51166rc3q5bil7y01n") - (fetchNetBSD "common/include/rpc/types.h" "9.1" "0n2df12mlc3cbc48jxq35yzl1y7ghgpykvy7jnfh898rdhac7m9a") + (fetchNetBSD "external/bsd/flex" "9.2" "0h98jpfj7vx5zh7vd7bk6b1hmzgkcb757a8j6d9zgygxxv13v43m") + (fetchNetBSD "sys/sys" "9.2" "0zawhw51klaigqqwkx0lzrx3mim2jywrc24cm7c66qsf1im9awgd") + (fetchNetBSD "common/include/rpc/types.h" "9.2" "0n2df12mlc3cbc48jxq35yzl1y7ghgpykvy7jnfh898rdhac7m9a") ] ++ libutil.extraPaths ++ _mainLibcExtraPaths; }); @@ -225,7 +231,7 @@ in lib.makeScopeWithSplicing xinstall "$@" ''; in mkDerivation { path = "usr.bin/xinstall"; - version = "9.1"; + version = "9.2"; sha256 = "1f6pbz3qv1qcrchdxif8p5lbmnwl8b9nq615hsd3cyl4avd5bfqj"; extraPaths = with self; [ mtree.src make.src ]; nativeBuildInputs = with buildPackages.netbsd; [ @@ -251,15 +257,15 @@ in lib.makeScopeWithSplicing pname = "fts"; path = "include/fts.h"; sha256 = "01d4fpxvz1pgzfk5xznz5dcm0x0gdzwcsfm1h3d0xc9kc6hj2q77"; - version = "9.1"; + version = "9.2"; nativeBuildInputs = with buildPackages.netbsd; [ bsdSetupHook ]; propagatedBuildInputs = with self; compatIfNeeded; extraPaths = with self; [ - (fetchNetBSD "lib/libc/gen/fts.c" "9.1" "1a8hmf26242nmv05ipn3ircxb0jqmmi66rh78kkyi9vjwkfl3qn7") - (fetchNetBSD "lib/libc/include/namespace.h" "9.1" "0kksr3pdwdc1cplqf5z12ih4cml6l11lqrz91f7hjjm64y7785kc") - (fetchNetBSD "lib/libc/gen/fts.3" "9.1" "1asxw0n3fhjdadwkkq3xplfgqgl3q32w1lyrvbakfa3gs0wz5zc1") + (fetchNetBSD "lib/libc/gen/fts.c" "9.2" "1a8hmf26242nmv05ipn3ircxb0jqmmi66rh78kkyi9vjwkfl3qn7") + (fetchNetBSD "lib/libc/include/namespace.h" "9.2" "0kksr3pdwdc1cplqf5z12ih4cml6l11lqrz91f7hjjm64y7785kc") + (fetchNetBSD "lib/libc/gen/fts.3" "9.2" "1asxw0n3fhjdadwkkq3xplfgqgl3q32w1lyrvbakfa3gs0wz5zc1") ]; skipIncludesPhase = true; buildPhase = '' @@ -286,7 +292,7 @@ in lib.makeScopeWithSplicing # Don't add this to nativeBuildInputs directly. Use statHook instead. stat = mkDerivation { path = "usr.bin/stat"; - version = "9.1"; + version = "9.2"; sha256 = "18nqwlndfc34qbbgqx5nffil37jfq9aw663ippasfxd2hlyc106x"; nativeBuildInputs = with buildPackages.netbsd; [ bsdSetupHook @@ -308,7 +314,7 @@ in lib.makeScopeWithSplicing tsort = mkDerivation { path = "usr.bin/tsort"; - version = "9.1"; + version = "9.2"; sha256 = "1dqvf9gin29nnq3c4byxc7lfd062pg7m84843zdy6n0z63hnnwiq"; nativeBuildInputs = with buildPackages.netbsd; [ bsdSetupHook @@ -319,7 +325,7 @@ in lib.makeScopeWithSplicing lorder = mkDerivation { path = "usr.bin/lorder"; - version = "9.1"; + version = "9.2"; sha256 = "0rjf9blihhm0n699vr2bg88m4yjhkbxh6fxliaay3wxkgnydjwn2"; nativeBuildInputs = with buildPackages.netbsd; [ bsdSetupHook @@ -336,8 +342,8 @@ in lib.makeScopeWithSplicing ## make = mkDerivation { path = "usr.bin/make"; - sha256 = "09szl3lp9s081h7f3nci5h9zc78wlk9a6g18mryrznrss90q9ngx"; - version = "9.1"; + sha256 = "0vi73yicbmbp522qzqvd979cx6zm5jakhy77xh73c1kygf8klccs"; + version = "9.2"; postPatch = '' # make needs this to pick up our sys make files export NIX_CFLAGS_COMPILE+=" -D_PATH_DEFSYSPATH=\"$out/share/mk\"" @@ -355,39 +361,39 @@ in lib.makeScopeWithSplicing make -C $BSDSRCDIR/share/mk FILESDIR=$out/share/mk install ''; extraPaths = [ - (fetchNetBSD "share/mk" "9.1" "0qi3ypd5dsxk2c33885fsn68a550nibsxb1jwf5w6bfrvcblzn2z") + (fetchNetBSD "share/mk" "9.2" "0w9x77cfnm6zwy40slradzi0ip9gz80x6lk7pvnlxzsr2m5ra5sy") ]; }; mtree = mkDerivation { path = "usr.sbin/mtree"; - version = "9.1"; + version = "9.2"; sha256 = "04p7w540vz9npvyb8g8hcf2xa05phn1y88hsyrcz3vwanvpc0yv9"; extraPaths = with self; [ mknod.src ]; }; mknod = mkDerivation { path = "sbin/mknod"; - version = "9.1"; + version = "9.2"; sha256 = "1d9369shzwgixz3nph991i8q5vk7hr04py3n9avbfbhzy4gndqs2"; }; getent = mkDerivation { path = "usr.bin/getent"; sha256 = "1qngywcmm0y7nl8h3n8brvkxq4jw63szbci3kc1q6a6ndhycbbvr"; - version = "9.1"; + version = "9.2"; patches = [ ./getent.patch ]; }; getconf = mkDerivation { path = "usr.bin/getconf"; sha256 = "122vslz4j3h2mfs921nr2s6m078zcj697yrb75rwp2hnw3qz4s8q"; - version = "9.1"; + version = "9.2"; }; locale = mkDerivation { path = "usr.bin/locale"; - version = "9.1"; + version = "9.2"; sha256 = "0kk6v9k2bygq0wf9gbinliqzqpzs9bgxn0ndyl2wcv3hh2bmsr9p"; patches = [ ./locale.patch ]; NIX_CFLAGS_COMPILE = "-DYESSTR=__YESSTR -DNOSTR=__NOSTR"; @@ -395,31 +401,31 @@ in lib.makeScopeWithSplicing rpcgen = mkDerivation { path = "usr.bin/rpcgen"; - version = "9.1"; + version = "9.2"; sha256 = "1kfgfx54jg98wbg0d95p0rvf4w0302v8fz724b0bdackdsrd4988"; }; genassym = mkDerivation { path = "usr.bin/genassym"; - version = "9.1"; + version = "9.2"; sha256 = "1acl1dz5kvh9h5806vkz2ap95rdsz7phmynh5i3x5y7agbki030c"; }; gencat = mkDerivation { path = "usr.bin/gencat"; - version = "9.1"; + version = "9.2"; sha256 = "0gd463x1hg36bhr7y0xryb5jyxk0z0g7xvy8rgk82nlbnlnsbbwb"; }; nbperf = mkDerivation { path = "usr.bin/nbperf"; - version = "9.1"; + version = "9.2"; sha256 = "1nxc302vgmjhm3yqdivqyfzslrg0vjpbss44s74rcryrl19mma9r"; }; tic = mkDerivation { path = "tools/tic"; - version = "9.1"; + version = "9.2"; sha256 = "092y7db7k4kh2jq8qc55126r5qqvlb8lq8mhmy5ipbi36hwb4zrz"; HOSTPROG = "tic"; buildInputs = with self; compatIfNeeded; @@ -431,29 +437,29 @@ in lib.makeScopeWithSplicing makeFlags = [ "TOOLDIR=$(out)" ]; extraPaths = with self; [ libterminfo.src - (fetchNetBSD "usr.bin/tic" "9.1" "1mwdfg7yx1g43ss378qsgl5rqhsxskqvsd2mqvrn38qw54i8v5i1") - (fetchNetBSD "tools/Makefile.host" "9.1" "15b4ab0n36lqj00j5lz2xs83g7l8isk3wx1wcapbrn66qmzz2sxy") + (fetchNetBSD "usr.bin/tic" "9.2" "1mwdfg7yx1g43ss378qsgl5rqhsxskqvsd2mqvrn38qw54i8v5i1") + (fetchNetBSD "tools/Makefile.host" "9.2" "15b4ab0n36lqj00j5lz2xs83g7l8isk3wx1wcapbrn66qmzz2sxy") ]; }; uudecode = mkDerivation { path = "usr.bin/uudecode"; - version = "9.1"; + version = "9.2"; sha256 = "00a3zmh15pg4vx6hz0kaa5mi8d2b1sj4h512d7p6wbvxq6mznwcn"; NIX_CFLAGS_COMPILE = lib.optional stdenv.isLinux "-DNO_BASE64"; }; cksum = mkDerivation { path = "usr.bin/cksum"; - version = "9.1"; + version = "9.2"; sha256 = "0msfhgyvh5c2jmc6qjnf12c378dhw32ffsl864qz4rdb2b98rfcq"; meta.platforms = lib.platforms.netbsd; }; config = mkDerivation { path = "usr.bin/config"; - version = "9.1"; - sha256 = "08mqq0izd9550dwk181smni51cbiim7rwp208phf25c4mqzaznf4"; + version = "9.2"; + sha256 = "1yz3n4hncdkk6kp595fh2q5lg150vpqg8iw2dccydkyw4y3hgsjj"; NIX_CFLAGS_COMPILE = [ "-DMAKE_BOOTSTRAP" ]; nativeBuildInputs = with buildPackages.netbsd; [ bsdSetupHook @@ -471,8 +477,8 @@ in lib.makeScopeWithSplicing ## include = mkDerivation { path = "include"; - version = "9.1"; - sha256 = "127kj61prvj3klc2an5rpgavgah2g6igfgprl45255i264wyg8v3"; + version = "9.2"; + sha256 = "0nxnmj4c8s3hb9n3fpcmd0zl3l1nmhivqgi9a35sis943qvpgl9h"; nativeBuildInputs = with buildPackages.netbsd; [ bsdSetupHook makeMinimal @@ -485,13 +491,13 @@ in lib.makeScopeWithSplicing makeFlags = [ "RPCGEN_CPP=${buildPackages.stdenv.cc.cc}/bin/cpp" ]; }; - common = fetchNetBSD "common" "9.1" "000n9frjm02h1bdwhb9rbr7wphs8vrj7n09l3v9hhnqrkn7nhy30"; + common = fetchNetBSD "common" "9.2" "1pfylz9r3ap5wnwwbwczbfjb1m5qdyspzbnmxmcdkpzz2zgj64b9"; sys-headers = mkDerivation { pname = "sys-headers"; path = "sys"; - version = "9.1"; - sha256 = "03sv6d7nvnkas4m5z87zxh1rpmggr91ls7di88fwc3cwd3mg3iyx"; + version = "9.2"; + sha256 = "03s18q8d9giipf05bx199fajc2qwikji0djz7hw63d2lya6bfnpj"; # Fix this error when building bootia32.efi and bootx64.efi: # error: PHDR segment not covered by LOAD segment @@ -543,7 +549,7 @@ in lib.makeScopeWithSplicing }; headers = symlinkJoin { - name = "netbsd-headers-9.1"; + name = "netbsd-headers-9.2"; paths = with self; [ include sys-headers @@ -560,7 +566,7 @@ in lib.makeScopeWithSplicing ## libutil = mkDerivation { path = "lib/libutil"; - version = "9.1"; + version = "9.2"; sha256 = "02gm5a5zhh8qp5r5q5r7x8x6x50ir1i0ncgsnfwh1vnrz6mxbq7z"; extraPaths = with self; [ common libc.src sys.src ]; nativeBuildInputs = with buildPackages.netbsd; [ @@ -574,7 +580,7 @@ in lib.makeScopeWithSplicing libedit = mkDerivation { path = "lib/libedit"; - version = "9.1"; + version = "9.2"; sha256 = "1wqhngraxwqk4jgrf5f18jy195yrp7c06n1gf31pbplq79mg1bcj"; buildInputs = with self; [ libterminfo libcurses ]; propagatedBuildInputs = with self; compatIfNeeded; @@ -595,7 +601,7 @@ in lib.makeScopeWithSplicing libterminfo = mkDerivation { path = "lib/libterminfo"; - version = "9.1"; + version = "9.2"; sha256 = "0pq05k3dj0dfsczv07frnnji92mazmy2qqngqbx2zgqc1x251414"; nativeBuildInputs = with buildPackages.netbsd; [ bsdSetupHook @@ -615,13 +621,13 @@ in lib.makeScopeWithSplicing make -C $BSDSRCDIR/share/terminfo $makeFlags BINDIR=$out/share install ''; extraPaths = with self; [ - (fetchNetBSD "share/terminfo" "9.1" "1vh9rl4w8118a9qdpblfxmv1wkpm83rm9gb4rzz5bpm56i6d7kk7") + (fetchNetBSD "share/terminfo" "9.2" "1vh9rl4w8118a9qdpblfxmv1wkpm83rm9gb4rzz5bpm56i6d7kk7") ]; }; libcurses = mkDerivation { path = "lib/libcurses"; - version = "9.1"; + version = "9.2"; sha256 = "0pd0dggl3w4bv5i5h0s1wrc8hr66n4hkv3zlklarwfdhc692fqal"; buildInputs = with self; [ libterminfo ]; NIX_CFLAGS_COMPILE = [ @@ -643,20 +649,20 @@ in lib.makeScopeWithSplicing column = mkDerivation { path = "usr.bin/column"; - version = "9.1"; + version = "9.2"; sha256 = "0r6b0hjn5ls3j3sv6chibs44fs32yyk2cg8kh70kb4cwajs4ifyl"; }; libossaudio = mkDerivation { path = "lib/libossaudio"; - version = "9.1"; + version = "9.2"; sha256 = "16l3bfy6dcwqnklvh3x0ps8ld1y504vf57v9rx8f9adzhb797jh0"; meta.platforms = lib.platforms.netbsd; }; librpcsvc = mkDerivation { path = "lib/librpcsvc"; - version = "9.1"; + version = "9.2"; sha256 = "1q34pfiyjbrgrdqm46jwrsqms49ly6z3b0xh1wg331zga900vq5n"; makeFlags = [ "INCSDIR=$(out)/include/rpcsvc" ]; meta.platforms = lib.platforms.netbsd; @@ -669,7 +675,7 @@ in lib.makeScopeWithSplicing librt = mkDerivation { path = "lib/librt"; - version = "9.1"; + version = "9.2"; sha256 = "07f8mpjcqh5kig5z5sp97fg55mc4dz6aa1x5g01nv2pvbmqczxc6"; meta.platforms = lib.platforms.netbsd; extraPaths = with self; [ libc.src ] ++ libc.extraPaths; @@ -681,7 +687,7 @@ in lib.makeScopeWithSplicing libcrypt = mkDerivation { path = "lib/libcrypt"; - version = "9.1"; + version = "9.2"; sha256 = "0siqan1wdqmmhchh2n8w6a8x1abbff8n4yb6jrqxap3hqn8ay54g"; SHLIBINSTALLDIR = "$(out)/lib"; meta.platforms = lib.platforms.netbsd; @@ -690,7 +696,7 @@ in lib.makeScopeWithSplicing libpthread-headers = mkDerivation { pname = "libpthread-headers"; path = "lib/libpthread"; - version = "9.1"; + version = "9.2"; sha256 = "0mlmc31k509dwfmx5s2x010wxjc44mr6y0cbmk30cfipqh8c962h"; installPhase = "includesPhase"; dontBuild = true; @@ -710,7 +716,7 @@ in lib.makeScopeWithSplicing libresolv = mkDerivation { path = "lib/libresolv"; - version = "9.1"; + version = "9.2"; sha256 = "1am74s74mf1ynwz3p4ncjkg63f78a1zjm983q166x4sgzps15626"; meta.platforms = lib.platforms.netbsd; extraPaths = with self; [ libc.src ]; @@ -718,7 +724,7 @@ in lib.makeScopeWithSplicing libm = mkDerivation { path = "lib/libm"; - version = "9.1"; + version = "9.2"; sha256 = "1apwfr26shdmbqqnmg7hxf7bkfxw44ynqnnnghrww9bnhqdnsy92"; SHLIBINSTALLDIR = "$(out)/lib"; meta.platforms = lib.platforms.netbsd; @@ -727,7 +733,7 @@ in lib.makeScopeWithSplicing i18n_module = mkDerivation { path = "lib/i18n_module"; - version = "9.1"; + version = "9.2"; sha256 = "0w6y5v3binm7gf2kn7y9jja8k18rhnyl55cvvfnfipjqdxvxd9jd"; meta.platforms = lib.platforms.netbsd; extraPaths = with self; [ libc.src ]; @@ -735,7 +741,7 @@ in lib.makeScopeWithSplicing csu = mkDerivation { path = "lib/csu"; - version = "9.1"; + version = "9.2"; sha256 = "0al5jfazvhlzn9hvmnrbchx4d0gm282hq5gp4xs2zmj9ycmf6d03"; meta.platforms = lib.platforms.netbsd; nativeBuildInputs = with buildPackages.netbsd; [ @@ -750,7 +756,7 @@ in lib.makeScopeWithSplicing ld_elf_so = mkDerivation { path = "libexec/ld.elf_so"; - version = "9.1"; + version = "9.2"; sha256 = "0ia9mqzdljly0vqfwflm5mzz55k7qsr4rw2bzhivky6k30vgirqa"; meta.platforms = lib.platforms.netbsd; LIBC_PIC = "${self.libc}/lib/libc_pic.a"; @@ -769,12 +775,12 @@ in lib.makeScopeWithSplicing libc = mkDerivation { path = "lib/libc"; - version = "9.1"; - sha256 = "0jg6kpi1xn4wvlqpwnkcv8655hxi0nhcxbk8lzbj7mlr6srxci8j"; + version = "9.2"; + sha256 = "1y9c13igg0kai07sqvf9cm6yqmd8lhfd8hq3q7biilbgs1l99as3"; USE_FORT = "yes"; MKPROFILE = "no"; extraPaths = with self; _mainLibcExtraPaths ++ [ - (fetchNetBSD "external/bsd/jemalloc" "9.1" "0cq704swa0h2yxv4gc79z2lwxibk9k7pxh3q5qfs7axx3jx3n8kb") + (fetchNetBSD "external/bsd/jemalloc" "9.2" "0cq704swa0h2yxv4gc79z2lwxibk9k7pxh3q5qfs7axx3jx3n8kb") ]; nativeBuildInputs = with buildPackages.netbsd; [ bsdSetupHook @@ -840,7 +846,7 @@ in lib.makeScopeWithSplicing dict = mkDerivation { path = "share/dict"; noCC = true; - version = "9.1"; + version = "9.2"; sha256 = "0svfc0byk59ri37pyjslv4c4rc7zw396r73mr593i78d39q5g3ad"; makeFlags = [ "BINDIR=$(out)/share" ]; }; @@ -848,7 +854,7 @@ in lib.makeScopeWithSplicing misc = mkDerivation { path = "share/misc"; noCC = true; - version = "9.1"; + version = "9.2"; sha256 = "1j2cdssdx6nncv8ffj7f7ybl7m9hadjj8vm8611skqdvxnjg6nbc"; makeFlags = [ "BINDIR=$(out)/share" ]; }; @@ -856,8 +862,8 @@ in lib.makeScopeWithSplicing man = mkDerivation { path = "share/man"; noCC = true; - version = "9.1"; - sha256 = "14sfvz9a5x0kmr9ywsdz09jhw8r1cmhq45wrrz2xwy09b8ykhip6"; + version = "9.2"; + sha256 = "1l4lmj4kmg8dl86x94sr45w0xdnkz8dn4zjx0ipgr9bnq98663zl"; makeFlags = [ "FILESDIR=$(out)/share" ]; }; # diff --git a/third_party/nixpkgs/pkgs/os-specific/darwin/apple-sdk-11.0/apple_sdk.nix b/third_party/nixpkgs/pkgs/os-specific/darwin/apple-sdk-11.0/apple_sdk.nix index 14945380e2..6e987c5dfb 100644 --- a/third_party/nixpkgs/pkgs/os-specific/darwin/apple-sdk-11.0/apple_sdk.nix +++ b/third_party/nixpkgs/pkgs/os-specific/darwin/apple-sdk-11.0/apple_sdk.nix @@ -151,6 +151,9 @@ in rec { # This framework doesn't exist in newer SDKs (somewhere around 10.13), but # there are references to it in nixpkgs. QuickTime = throw "QuickTime framework not available"; + + # Seems to be appropriate given https://developer.apple.com/forums/thread/666686 + JavaVM = super.JavaNativeFoundation; }; bareFrameworks = ( diff --git a/third_party/nixpkgs/pkgs/os-specific/darwin/mas/default.nix b/third_party/nixpkgs/pkgs/os-specific/darwin/mas/default.nix index 495d47df89..907d218532 100644 --- a/third_party/nixpkgs/pkgs/os-specific/darwin/mas/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/darwin/mas/default.nix @@ -7,11 +7,11 @@ stdenv.mkDerivation rec { pname = "mas"; - version = "1.8.1"; + version = "1.8.2"; src = fetchurl { url = "https://github.com/mas-cli/mas/releases/download/v${version}/mas.pkg"; - sha256 = "W/wgg+ETeJPoZ7MoVGH2uJzQiZMLIy3n1JYKUloc3ZU="; + sha256 = "HlLQKBVIYKanS6kjkbYdabBi1T0irxE6fNd2H6mDKe4="; }; nativeBuildInputs = [ libarchive p7zip ]; @@ -21,17 +21,11 @@ stdenv.mkDerivation rec { bsdtar -xf Payload~ ''; - doBuild = false; + dontBuild = true; installPhase = '' mkdir -p $out - cp -r ./bin $out - cp -r ./Frameworks $out - ''; - - postFixup = '' - install_name_tool -change @rpath/MasKit.framework/Versions/A/MasKit $out/Frameworks/MasKit.framework/Versions/A/MasKit $out/bin/mas - install_name_tool -change @rpath/Commandant.framework/Commandant $out/Frameworks/MasKit.framework/Versions/A/Frameworks/Commandant.framework/Versions/A/Commandant $out/bin/mas + cp -r ./usr/local/bin $out ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/os-specific/darwin/reattach-to-user-namespace/default.nix b/third_party/nixpkgs/pkgs/os-specific/darwin/reattach-to-user-namespace/default.nix index dedc757895..b4d26327bd 100644 --- a/third_party/nixpkgs/pkgs/os-specific/darwin/reattach-to-user-namespace/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/darwin/reattach-to-user-namespace/default.nix @@ -11,7 +11,10 @@ stdenv.mkDerivation rec { sha256 = "1qgimh58hcx5f646gj2kpd36ayvrdkw616ad8cb3lcm11kg0ag79"; }; - buildFlags = [ "ARCHES=x86_64" ]; + buildFlags = + if stdenv.hostPlatform.system == "x86_64-darwin" then [ "ARCHES=x86_64" ] + else if stdenv.hostPlatform.system == "aarch64-darwin" then [ "ARCHES=arm64" ] + else throw "reattach-to-user-namespace isn't being built for ${stdenv.hostPlatform.system} yet."; installPhase = '' mkdir -p $out/bin diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-plugins/wrapper.nix b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-plugins/wrapper.nix deleted file mode 100644 index 8271088a50..0000000000 --- a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-plugins/wrapper.nix +++ /dev/null @@ -1,4 +0,0 @@ -{ writeShellScriptBin, stdenv, alsaPlugins }: -writeShellScriptBin "ap${if stdenv.hostPlatform.system == "i686-linux" then "32" else "64"}" '' - ALSA_PLUGIN_DIRS=${alsaPlugins}/lib/alsa-lib "$@" -'' diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-firmware/cross.patch b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-firmware/cross.patch similarity index 100% rename from third_party/nixpkgs/pkgs/os-specific/linux/alsa-firmware/cross.patch rename to third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-firmware/cross.patch diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-firmware/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-firmware/default.nix similarity index 100% rename from third_party/nixpkgs/pkgs/os-specific/linux/alsa-firmware/default.nix rename to third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-firmware/default.nix diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-lib/alsa-plugin-conf-multilib.patch b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-lib/alsa-plugin-conf-multilib.patch similarity index 100% rename from third_party/nixpkgs/pkgs/os-specific/linux/alsa-lib/alsa-plugin-conf-multilib.patch rename to third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-lib/alsa-plugin-conf-multilib.patch diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-lib/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-lib/default.nix similarity index 65% rename from third_party/nixpkgs/pkgs/os-specific/linux/alsa-lib/default.nix rename to third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-lib/default.nix index 2511c88f3f..7d2615824a 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-lib/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-lib/default.nix @@ -1,24 +1,21 @@ -{ lib, stdenv, fetchurl, fetchpatch, alsa-ucm-conf, alsa-topology-conf }: +{ lib +, stdenv +, fetchurl +, alsa-topology-conf +, alsa-ucm-conf +}: stdenv.mkDerivation rec { pname = "alsa-lib"; - version = "1.2.4"; + version = "1.2.5"; src = fetchurl { url = "mirror://alsa/lib/${pname}-${version}.tar.bz2"; - sha256 = "sha256-91VL4aVs3/RotY/BwpuVtkhkxZADjdMJx6l4xxFpCPc="; + sha256 = "067ga0l6zr782kw8jdsqvbb20pcgnl0vkpnnz2n36fq8ii58k4lh"; }; patches = [ ./alsa-plugin-conf-multilib.patch - (fetchpatch { - # plucked from upstream master, delete in next release - # without this patch alsa 1.2.4 fails to compile against musl-libc - # due to an overly conservative ifdef gate in a new feature - name = "fix-dlo.patch"; - url = "https://github.com/alsa-project/alsa-lib/commit/ad8c8e5503980295dd8e5e54a6285d2d7e32eb1e.patch"; - sha256 = "QQP4C1dSnJP1MNKt2el7Wn3KmtwtYzvyIHWdrHs+Jw4="; - }) ]; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-oss/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-oss/default.nix similarity index 86% rename from third_party/nixpkgs/pkgs/os-specific/linux/alsa-oss/default.nix rename to third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-oss/default.nix index 9c87dbe8e8..f600b52c5f 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-oss/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-oss/default.nix @@ -1,4 +1,4 @@ -{lib, stdenv, fetchurl, alsaLib, gettext, ncurses, libsamplerate}: +{lib, stdenv, fetchurl, alsa-lib, gettext, ncurses, libsamplerate}: stdenv.mkDerivation rec { pname = "alsa-oss"; @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "13nn6n6wpr2sj1hyqx4r9nb9bwxnhnzw8r2f08p8v13yjbswxbb4"; }; - buildInputs = [ alsaLib ncurses libsamplerate ]; + buildInputs = [ alsa-lib ncurses libsamplerate ]; nativeBuildInputs = [ gettext ]; configureFlags = [ "--disable-xmlto" ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-plugins/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-plugins/default.nix similarity index 72% rename from third_party/nixpkgs/pkgs/os-specific/linux/alsa-plugins/default.nix rename to third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-plugins/default.nix index 09dbdbc9b6..747979b103 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-plugins/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-plugins/default.nix @@ -1,19 +1,19 @@ -{ stdenv, fetchurl, lib, pkg-config, alsaLib, libogg, libpulseaudio ? null, libjack2 ? null }: +{ stdenv, fetchurl, lib, pkg-config, alsa-lib, libogg, libpulseaudio ? null, libjack2 ? null }: stdenv.mkDerivation rec { pname = "alsa-plugins"; - version = "1.2.2"; + version = "1.2.5"; src = fetchurl { url = "mirror://alsa/plugins/${pname}-${version}.tar.bz2"; - sha256 = "0z9k3ssbfk2ky2w13avgyf202j1drsz9sv3834bp33cj1i2hc3qw"; + sha256 = "086z2g2f95570vfvp9d5bakib4k18fb4bszf3lgx3j6j6f2gkvj2"; }; nativeBuildInputs = [ pkg-config ]; # ToDo: a52, etc.? buildInputs = - [ alsaLib libogg ] + [ alsa-lib libogg ] ++ lib.optional (libpulseaudio != null) libpulseaudio ++ lib.optional (libjack2 != null) libjack2; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-plugins/wrapper.nix b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-plugins/wrapper.nix new file mode 100644 index 0000000000..992f4886e2 --- /dev/null +++ b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-plugins/wrapper.nix @@ -0,0 +1,10 @@ +{ stdenv +, alsa-plugins +, writeShellScriptBin +}: +let + arch = if stdenv.hostPlatform.system == "i686-linux" then "32" else "64"; +in +writeShellScriptBin "ap${arch}" '' + ALSA_PLUGIN_DIRS=${alsa-plugins}/lib/alsa-lib "$@" +'' diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-tools/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-tools/default.nix similarity index 93% rename from third_party/nixpkgs/pkgs/os-specific/linux/alsa-tools/default.nix rename to third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-tools/default.nix index 897d8dd6c0..8b9abb7403 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-tools/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-tools/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, pkg-config, gtk2, gtk3, fltk13 }: +{ lib, stdenv, fetchurl, alsa-lib, pkg-config, gtk2, gtk3, fltk13 }: # Comes from upstream as as bundle of several tools, # some use gtk2, some gtk3 (and some even fltk13). @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib gtk2 gtk3 fltk13 ]; + buildInputs = [ alsa-lib gtk2 gtk3 fltk13 ]; patchPhase = '' export tools="as10k1 hda-verb hdspmixer echomixer hdajackretask hdspconf hwmixvolume mixartloader rmedigicontrol sscape_ctl vxloader envy24control hdajacksensetest hdsploader ld10k1 pcxhrloader sb16_csp us428control" diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-topology-conf/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-topology-conf/default.nix similarity index 89% rename from third_party/nixpkgs/pkgs/os-specific/linux/alsa-topology-conf/default.nix rename to third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-topology-conf/default.nix index 2328fea91f..97960f833e 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-topology-conf/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-topology-conf/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "alsa-topology-conf-${version}"; - version = "1.2.4"; + version = "1.2.5"; src = fetchurl { url = "mirror://alsa/lib/${name}.tar.bz2"; - sha256 = "01zdg6q4s6d01k39z96wi4vbhrfw1i2g4yi5dijwfk6a5vjfdq2m"; + sha256 = "sha256-i/qDBspj4dDL6AvphGYCc7kb1bfdCACmxapx3YyNd1w="; }; dontBuild = true; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-ucm-conf/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-ucm-conf/default.nix similarity index 89% rename from third_party/nixpkgs/pkgs/os-specific/linux/alsa-ucm-conf/default.nix rename to third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-ucm-conf/default.nix index d667cd3d51..d87f3eebb8 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-ucm-conf/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-ucm-conf/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "alsa-ucm-conf-${version}"; - version = "1.2.4"; + version = "1.2.5"; src = fetchurl { url = "mirror://alsa/lib/${name}.tar.bz2"; - sha256 = "0h6kzi1cfdqyxp4pwpqh5wb89c8s9wrgix315bvamffwfxf56frc"; + sha256 = "sha256-CTrj2Fpeb9LNHMJ/7aQA1xkTgvuLXl4jSXKGyHwVB6U="; }; dontBuild = true; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-utils/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-utils/default.nix similarity index 66% rename from third_party/nixpkgs/pkgs/os-specific/linux/alsa-utils/default.nix rename to third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-utils/default.nix index dd747bbbf6..37bda86b0a 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/alsa-utils/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/alsa-project/alsa-utils/default.nix @@ -1,23 +1,24 @@ -{lib, stdenv, fetchurl, alsaLib, gettext, makeWrapper, ncurses, libsamplerate, pciutils, which, fftw}: +{lib, stdenv, fetchurl, alsa-lib, gettext, makeWrapper, ncurses, libsamplerate, pciutils, which, fftw}: stdenv.mkDerivation rec { pname = "alsa-utils"; - version = "1.2.4"; + version = "1.2.5"; src = fetchurl { url = "mirror://alsa/utils/${pname}-${version}.tar.bz2"; - sha256 = "09m4dnn4kplawprd2bl15nwa0b4r1brab3x44ga7f1fyk7aw5zwq"; + sha256 = "15wrl7jsprpcqdk01a3hdh2lak5jhp5jgflkr80h1crqb3q0m5q9"; }; nativeBuildInputs = [ gettext makeWrapper ]; - buildInputs = [ alsaLib ncurses libsamplerate fftw ]; + buildInputs = [ alsa-lib ncurses libsamplerate fftw ]; configureFlags = [ "--disable-xmlto" "--with-udev-rules-dir=$(out)/lib/udev/rules.d" ]; installFlags = [ "ASOUND_STATE_DIR=$(TMPDIR)/dummy" ]; postFixup = '' - wrapProgram $out/bin/alsa-info.sh --prefix PATH : "${lib.makeBinPath [ which pciutils ]}" + mv $out/bin/alsa-info.sh $out/bin/alsa-info + wrapProgram $out/bin/alsa-info --prefix PATH : "${lib.makeBinPath [ which pciutils ]}" ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/apfs/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/apfs/default.nix new file mode 100644 index 0000000000..e27272a614 --- /dev/null +++ b/third_party/nixpkgs/pkgs/os-specific/linux/apfs/default.nix @@ -0,0 +1,35 @@ +{ lib +, stdenv +, fetchFromGitHub +, kernel +}: + +stdenv.mkDerivation { + pname = "apfs"; + version = "unstable-2021-06-25-${kernel.version}"; + + src = fetchFromGitHub { + owner = "linux-apfs"; + repo = "linux-apfs-rw"; + rev = "2ce6d06dc73036d113da5166c59393233bf54229"; + sha256 = "sha256-18HFtPr0qcTIZ8njwEtveiPYO+HGlj90bdUoL47UUY0="; + }; + + hardeningDisable = [ "pic" ]; + nativeBuildInputs = kernel.moduleBuildDependencies; + + makeFlags = [ + "KERNELRELEASE=${kernel.modDirVersion}" + "KERNEL_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build" + "INSTALL_MOD_PATH=$(out)" + ]; + + meta = with lib; { + description = "APFS module for linux"; + homepage = "https://github.com/linux-apfs/linux-apfs-rw"; + license = licenses.gpl2Only; + platforms = platforms.linux; + broken = kernel.kernelOlder "4.19"; + maintainers = with maintainers; [ Luflosi ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/aseq2json/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/aseq2json/default.nix index 015419ee07..646e9f7b7b 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/aseq2json/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/aseq2json/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchFromGitHub, pkg-config, alsaLib, glib, json-glib }: +{ stdenv, lib, fetchFromGitHub, pkg-config, alsa-lib, glib, json-glib }: stdenv.mkDerivation { pname = "aseq2json"; @@ -12,7 +12,7 @@ stdenv.mkDerivation { sourceRoot = "source/aseq2json"; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib glib json-glib ]; + buildInputs = [ alsa-lib glib json-glib ]; installPhase = '' install -D --target-directory "$out/bin" aseq2json diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/audit/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/audit/default.nix index 84bc6086d1..30327fb108 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/audit/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/audit/default.nix @@ -61,7 +61,7 @@ stdenv.mkDerivation rec { # --whole-archive linker flag is required to be sure that linker # correctly chooses strong version of symbol regardless of order of # object files at command line. - + lib.optionalString stdenv.targetPlatform.isStatic '' + + lib.optionalString stdenv.hostPlatform.isStatic '' export LDFLAGS=-Wl,--whole-archive ''; meta = { diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/bluez/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/bluez/default.nix index 2e342fbc03..f995c8c5c1 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/bluez/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/bluez/default.nix @@ -1,7 +1,7 @@ { stdenv , lib , fetchurl -, alsaLib +, alsa-lib , dbus , glib , json_c @@ -27,7 +27,7 @@ in stdenv.mkDerivation rec { }; buildInputs = [ - alsaLib + alsa-lib dbus glib json_c diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/busybox/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/busybox/default.nix index 63435e0916..4949cd7c14 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/busybox/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/busybox/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, buildPackages, fetchurl, fetchFromGitLab, fetchpatch +{ stdenv, lib, buildPackages, fetchurl, fetchFromGitLab , enableStatic ? stdenv.hostPlatform.isStatic , enableMinimal ? false # Allow forcing musl without switching stdenv itself, e.g. for our bootstrapping: @@ -32,7 +32,7 @@ let CONFIG_FEATURE_WTMP n ''; - # The debian version lacks behind the upstream version and also contains + # The debian version lags behind the upstream version and also contains # a debian-specific suffix. We only fetch the debian repository to get the # default.script debianVersion = "1.30.1-6"; @@ -49,17 +49,14 @@ in stdenv.mkDerivation rec { pname = "busybox"; - # TODO: When bumping to next version, remove the patch - # for CVE-2021-28831 (assuming the patch was included in - # the next upstream release) - version = "1.32.1"; + version = "1.33.1"; # Note to whoever is updating busybox: please verify that: # nix-build pkgs/stdenv/linux/make-bootstrap-tools.nix -A test # still builds after the update. src = fetchurl { url = "https://busybox.net/downloads/${pname}-${version}.tar.bz2"; - sha256 = "1vhd59qmrdyrr1q7rvxmyl96z192mxl089hi87yl0hcp6fyw8mwx"; + sha256 = "0a0dcvsh7nxnhxc5y73fky0z30i9p7r30qfidm2akn0n5fywdkhj"; }; hardeningDisable = [ "format" "pie" ] @@ -67,11 +64,6 @@ stdenv.mkDerivation rec { patches = [ ./busybox-in-store.patch - (fetchpatch { - name = "CVE-2021-28831.patch"; - url = "https://git.busybox.net/busybox/patch/?id=f25d254dfd4243698c31a4f3153d4ac72aa9e9bd"; - sha256 = "0y79flfbk45krwn963nnbqc21a88bsz4k4asqwvcnfk2lkciadxm"; - }) # TODO: Removing when bumping the version ] ++ lib.optional (stdenv.hostPlatform != stdenv.buildPlatform) ./clang-cross.patch; postPatch = "patchShebangs ."; @@ -142,7 +134,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "Tiny versions of common UNIX utilities in a single small executable"; homepage = "https://busybox.net/"; - license = licenses.gpl2; + license = licenses.gpl2Only; maintainers = with maintainers; [ TethysSvensson ]; platforms = platforms.linux; priority = 10; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/cpufrequtils/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/cpufrequtils/default.nix index d099a62bc8..6f94d0f892 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/cpufrequtils/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/cpufrequtils/default.nix @@ -24,7 +24,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "Tools to display or change the CPU governor settings"; homepage = "http://ftp.be.debian.org/pub/linux/utils/kernel/cpufreq/cpufrequtils.html"; - license = licenses.gpl2; - platforms = platforms.linux; + license = licenses.gpl2Only; + platforms = [ "x86_64-linux" ]; }; } diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/dbus-broker/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/dbus-broker/default.nix index c6f1c1d825..b7e0a6b615 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/dbus-broker/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/dbus-broker/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "dbus-broker"; - version = "28"; + version = "29"; src = fetchFromGitHub { owner = "bus1"; repo = "dbus-broker"; rev = "v${version}"; - sha256 = "1rsn74x6yhyl9w7jqgnzgzyhp9cln1602jyzpw5qvrkdk5b7zzgs"; + sha256 = "1abbi8c0mgdqjidlp2wnmy0a88xv173hq88sh5m966c5r1h6alkq"; fetchSubmodules = true; }; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/dpdk-kmods/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/dpdk-kmods/default.nix new file mode 100644 index 0000000000..a188336cbe --- /dev/null +++ b/third_party/nixpkgs/pkgs/os-specific/linux/dpdk-kmods/default.nix @@ -0,0 +1,34 @@ +{ lib, stdenv, fetchzip, kernel }: + +stdenv.mkDerivation rec { + pname = "dpdk-kmods"; + version = "2021-04-21"; + + src = fetchzip { + url = "http://git.dpdk.org/dpdk-kmods/snapshot/dpdk-kmods-e13d7af77a1bf98757f85c3c4083f6ee6d0d2372.tar.xz"; + sha256 = "sha256-8ysWT3X3rIyUAo4/QbkX7cQq5iFeU18/BPsmmWugcIc="; + }; + + hardeningDisable = [ "pic" ]; + + KSRC = "${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"; + + nativeBuildInputs = kernel.moduleBuildDependencies; + + preBuild = "cd linux/igb_uio"; + + installPhase = '' + make -C ${KSRC} M=$(pwd) modules_install + ''; + + INSTALL_MOD_PATH = placeholder "out"; + enableParallelBuilding = true; + + meta = with lib; { + description = "Kernel modules for DPDK"; + homepage = "https://git.dpdk.org/dpdk-kmods/"; + license = licenses.gpl2Only; + maintainers = [ maintainers.mic92 ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/dpdk/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/dpdk/default.nix index acb3da11fd..a4bad12b71 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/dpdk/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/dpdk/default.nix @@ -8,14 +8,14 @@ let mod = kernel != null; - dpdkVersion = "21.02"; + dpdkVersion = "21.05"; in stdenv.mkDerivation rec { pname = "dpdk"; version = "${dpdkVersion}" + lib.optionalString mod "-${kernel.version}"; src = fetchurl { url = "https://fast.dpdk.org/rel/dpdk-${dpdkVersion}.tar.xz"; - sha256 = "sha256-CZJKKoJVGqKZeKNoYYT4oQX1L1ZAsb4of1QLLJHpSJs=="; + sha256 = "sha256-HhJJm0xfzbV8g+X+GE6mvs3ffPCSiTwsXvLvsO7BLws="; }; nativeBuildInputs = [ @@ -72,6 +72,6 @@ in stdenv.mkDerivation rec { homepage = "http://dpdk.org/"; license = with licenses; [ lgpl21 gpl2 bsd2 ]; platforms = platforms.linux; - maintainers = with maintainers; [ magenbluten orivej ]; + maintainers = with maintainers; [ magenbluten orivej mic92 ]; }; } diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/dstat/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/dstat/default.nix index 9f0afd6c2b..d79f9f4c61 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/dstat/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/dstat/default.nix @@ -18,7 +18,7 @@ python3Packages.buildPythonApplication rec { ./fix_pluginpath.patch # this fixes another bug with python3 (fetchpatch { - url = https://github.com/efexgee/dstat/commit/220a785321b13b6df92a536080aca6ef1cb644ad.patch ; + url = "https://github.com/efexgee/dstat/commit/220a785321b13b6df92a536080aca6ef1cb644ad.patch"; sha256 = "08kcz3yxvl35m55y7g1pr73x3bjcqnv0qlswxqyq8cqxg9zd64cn"; }) ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/ell/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/ell/default.nix index 8a41cd126d..60e597685e 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/ell/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/ell/default.nix @@ -7,14 +7,14 @@ stdenv.mkDerivation rec { pname = "ell"; - version = "0.40"; + version = "0.41"; outputs = [ "out" "dev" ]; src = fetchgit { url = "https://git.kernel.org/pub/scm/libs/${pname}/${pname}.git"; rev = version; - sha256 = "sha256-Yr08Kb8YU7xqBnhhS8rn+GFXAV68Hgj4aY26eptb9/8="; + sha256 = "sha256-UCE+PgGmbePlOoAc8jXxCX6fHr16qf1AQMKxizfSTJM="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/fuse/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/fuse/default.nix index b7ee8772f4..b060b90828 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/fuse/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/fuse/default.nix @@ -11,7 +11,7 @@ in { }; fuse_3 = mkFuse { - version = "3.10.3"; - sha256Hash = "054g3jqy8lhlj8kkwd16wxaxzynmh8h5iv20cryd0psg0hgmhd7v"; + version = "3.10.4"; + sha256Hash = "1ml4bs4wx5dbz5xpnd5g8b9avmn7g7jvf16fbdlk0da8il0qd2rx"; }; } diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/guvcview/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/guvcview/default.nix index c241ac02a6..04eccaf024 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/guvcview/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/guvcview/default.nix @@ -9,7 +9,7 @@ , udev , libusb1 , libv4l -, alsaLib +, alsa-lib , gsl , libpng , sfml @@ -45,7 +45,7 @@ stdenv.mkDerivation rec { buildInputs = [ SDL2 - alsaLib + alsa-lib ffmpeg libusb1 libv4l diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/hdparm/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/hdparm/default.nix index e925b98902..300bb499f8 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/hdparm/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/hdparm/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "hdparm"; - version = "9.61"; + version = "9.62"; src = fetchurl { url = "mirror://sourceforge/hdparm/hdparm-${version}.tar.gz"; - sha256 = "sha256-2hocOIfxC4OX6OAgE8qmEULg5yyw1zmXQhyi8vTfU0M="; + sha256 = "sha256-LA+ddc2+2pKKJaEozT0LcSBEXsCRDAsp1MEDjtG+d38="; }; preBuild = '' diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/iio-sensor-proxy/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/iio-sensor-proxy/default.nix index 971a1abffd..5566103b2c 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/iio-sensor-proxy/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/iio-sensor-proxy/default.nix @@ -1,15 +1,16 @@ -{ lib, stdenv, fetchFromGitHub, autoconf-archive, gettext, libtool, intltool, autoconf, automake +{ lib, stdenv, fetchFromGitLab, autoconf-archive, gettext, libtool, intltool, autoconf, automake , glib, gtk3, gtk-doc, libgudev, pkg-config, systemd }: stdenv.mkDerivation rec { pname = "iio-sensor-proxy"; - version = "2.8"; + version = "3.0"; - src = fetchFromGitHub { + src = fetchFromGitLab { + domain = "gitlab.freedesktop.org"; owner = "hadess"; repo = pname; rev = version; - sha256 = "07rzm1z2p6lh4iv5pyp0p2x5805m9gsh19kcsjls3fi25p3a2c00"; + sha256 = "0ngbz1vkbjci3ml6p47jh6c6caipvbkm8mxrc8ayr6vc2p9l1g49"; }; configurePhase = '' diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/iotop-c/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/iotop-c/default.nix new file mode 100644 index 0000000000..47cfa57fe8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/os-specific/linux/iotop-c/default.nix @@ -0,0 +1,31 @@ +{stdenv, fetchFromGitHub, lib, ncurses, pkg-config }: + +stdenv.mkDerivation rec { + pname = "iotop-c"; + version = "1.17"; + + src = fetchFromGitHub { + owner = "Tomas-M"; + repo = "iotop"; + rev = "v${version}"; + sha256 = "0hjy30155c3nijx3jgyn5kpj293632p0j6f3lf5acdfax1ynav86"; + }; + + nativeBuildInputs = [ pkg-config ]; + buildInputs = [ ncurses ]; + makeFlags = [ "DESTDIR=$(out)" "TARGET=iotop-c" ]; + + postInstall = '' + mv $out/usr/share/man/man8/{iotop,iotop-c}.8 + ln -s $out/usr/sbin $out/bin + ln -s $out/usr/share $out/share + ''; + + meta = with lib; { + description = "iotop identifies processes that use high amount of input/output requests on your machine"; + homepage = "https://github.com/Tomas-M/iotop"; + maintainers = [ maintainers.arezvov ]; + license = licenses.gpl2Plus; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/iwd/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/iwd/default.nix index 63692149f3..3b7cc7d3d4 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/iwd/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/iwd/default.nix @@ -12,12 +12,12 @@ stdenv.mkDerivation rec { pname = "iwd"; - version = "1.14"; + version = "1.15"; src = fetchgit { url = "https://git.kernel.org/pub/scm/network/wireless/iwd.git"; rev = version; - sha256 = "sha256-uGe4TO1/bs8k2z3wOJqaZgT6u6yX/7wx4HMSS2hN4XE="; + sha256 = "sha256-qGQDIzJfeBT9VLwr9Ci9vXcM0ZvFvjL2E9PcKoZ8E94="; }; outputs = [ "out" "man" ] diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kbd/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kbd/default.nix index 467de4b029..c7a59e59ca 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kbd/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kbd/default.nix @@ -8,6 +8,10 @@ , check , pam , coreutils +, gzip +, bzip2 +, xz +, zstd }: stdenv.mkDerivation rec { @@ -38,6 +42,13 @@ stdenv.mkDerivation rec { mv fgGIod/trf{,-fgGIod}.map mv colemak/{en-latin9,colemak}.map popd + + # Fix paths to decompressors. Trailing space to avoid replacing `xz` in `".xz"`. + substituteInPlace src/libkbdfile/kbdfile.c \ + --replace 'gzip ' '${gzip}/bin/gzip ' \ + --replace 'bzip2 ' '${bzip2.bin}/bin/bzip2 ' \ + --replace 'xz ' '${xz.bin}/bin/xz ' \ + --replace 'zstd ' '${zstd.bin}/bin/zstd ' ''; postInstall = '' @@ -50,7 +61,9 @@ stdenv.mkDerivation rec { buildInputs = [ check pam ]; nativeBuildInputs = [ autoreconfHook pkg-config flex ]; - passthru.tests = nixosTests.keymap; + passthru.tests = { + inherit (nixosTests) keymap kbd-setfont-decompress; + }; meta = with lib; { homepage = "https://kbd-project.org/"; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/common-config.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/common-config.nix index 776a422df7..26bb9f8206 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/common-config.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/common-config.nix @@ -248,7 +248,7 @@ let DRM_LOAD_EDID_FIRMWARE = yes; VGA_SWITCHEROO = yes; # Hybrid graphics support DRM_GMA500 = whenAtLeast "5.12" module; - DRM_GMA600 = yes; + DRM_GMA600 = whenOlder "5.13" yes; DRM_GMA3600 = whenOlder "5.12" yes; DRM_VMWGFX_FBCON = yes; # necessary for amdgpu polaris support @@ -443,7 +443,7 @@ let SECURITY_SELINUX_BOOTPARAM_VALUE = whenOlder "5.1" (freeform "0"); # Disable SELinux by default # Prevent processes from ptracing non-children processes SECURITY_YAMA = option yes; - DEVKMEM = no; # Disable /dev/kmem + DEVKMEM = whenOlder "5.13" no; # Disable /dev/kmem USER_NS = yes; # Support for user namespaces @@ -698,7 +698,7 @@ let THRUSTMASTER_FF = yes; ZEROPLUS_FF = yes; - MODULE_COMPRESS = yes; + MODULE_COMPRESS = whenOlder "5.13" yes; MODULE_COMPRESS_XZ = yes; SYSVIPC = yes; # System-V IPC diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/hardened/patches.json b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/hardened/patches.json index 6cf635da18..3d3ddfc331 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/hardened/patches.json +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/hardened/patches.json @@ -1,38 +1,32 @@ { "4.14": { "extra": "-hardened1", - "name": "linux-hardened-4.14.234-hardened1.patch", - "sha256": "1vdr3j62whc2xdy1l4imkp6axpwh7r3cjp0sgsld7l5331x19qh7", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.14.234-hardened1/linux-hardened-4.14.234-hardened1.patch" + "name": "linux-hardened-4.14.237-hardened1.patch", + "sha256": "0iz7q29dazp11ii1f2kcffkpi14765w0ryrn6dsb8mlqcsw639lc", + "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.14.237-hardened1/linux-hardened-4.14.237-hardened1.patch" }, "4.19": { "extra": "-hardened1", - "name": "linux-hardened-4.19.192-hardened1.patch", - "sha256": "0gy4h73ygiqr6c9zbmfz4as18ldcnnzgc4qd2nss08m2x1cb1n76", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.19.192-hardened1/linux-hardened-4.19.192-hardened1.patch" + "name": "linux-hardened-4.19.195-hardened1.patch", + "sha256": "1h8v28kscaz4y2samww3vxpq4xvkbdvsnr0hybimn0ygwphshpqq", + "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.19.195-hardened1/linux-hardened-4.19.195-hardened1.patch" }, "5.10": { "extra": "-hardened1", - "name": "linux-hardened-5.10.40-hardened1.patch", - "sha256": "15nprqyw9whqghpnr39wpn54snxz49wdr4dq41dbmmqmrrlfyxnr", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.10.40-hardened1/linux-hardened-5.10.40-hardened1.patch" - }, - "5.11": { - "extra": "-hardened1", - "name": "linux-hardened-5.11.22-hardened1.patch", - "sha256": "1lwf56pxyzqzjqw4k1qd93vi44abmbz6hqbalamz6ancxkb800hh", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.11.22-hardened1/linux-hardened-5.11.22-hardened1.patch" + "name": "linux-hardened-5.10.45-hardened1.patch", + "sha256": "1382dflkv31b9apf3l0b5wcq8hyi69jm03139z3m0vbxi93pk44z", + "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.10.45-hardened1/linux-hardened-5.10.45-hardened1.patch" }, "5.12": { "extra": "-hardened1", - "name": "linux-hardened-5.12.7-hardened1.patch", - "sha256": "1r8bf8hrxpzyxqcy3zf1m86bfi0lr4aijbrq12sqb7n2g1wc1j87", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.12.7-hardened1/linux-hardened-5.12.7-hardened1.patch" + "name": "linux-hardened-5.12.12-hardened1.patch", + "sha256": "10923kjxhfphsh1wr0zjj3lk16bxkq9ana4hyy8af7cn2k30k4iw", + "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.12.12-hardened1/linux-hardened-5.12.12-hardened1.patch" }, "5.4": { "extra": "-hardened1", - "name": "linux-hardened-5.4.122-hardened1.patch", - "sha256": "1wa3h18gwgn4blkidf8mlw3r0nb2asya5rbwylghq3qnaa2hc0k7", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.4.122-hardened1/linux-hardened-5.4.122-hardened1.patch" + "name": "linux-hardened-5.4.127-hardened1.patch", + "sha256": "1qsz5cnm0ny138pbd9f7j5avvz69g51db7dgr1q4farrjml3nshy", + "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.4.127-hardened1/linux-hardened-5.4.127-hardened1.patch" } } diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.14.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.14.nix index 5880415876..a550008b9d 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.14.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.14.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "4.14.234"; + version = "4.14.237"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,7 +13,7 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "1mwqb9sq6qd9angl3xysdsrfpgppf46g3kiwg1svqgpgrx7cqn1b"; + sha256 = "0kib9p61hhwjbr8zhir9aw86qik7k6bm95503n3k09ayyachajpq"; }; kernelTests = args.kernelTests or [ nixosTests.kernel-generic.linux_4_14 ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.19.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.19.nix index 23d651e21d..42d98f1485 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.19.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.19.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "4.19.192"; + version = "4.19.195"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,7 +13,7 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "1680dz4wjg721a8lqwh6ijd90zcr2f3wzcvhwgn3shbwgjkwsk87"; + sha256 = "02rdy5mdmwxli0cin5n7ab492y9fs01hhqxrjq6b4idwv5baa42m"; }; kernelTests = args.kernelTests or [ nixosTests.kernel-generic.linux_4_19 ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.4.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.4.nix index 8320c2fb9c..d06d5133b4 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.4.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.4.nix @@ -1,13 +1,13 @@ { buildPackages, fetchurl, perl, buildLinux, nixosTests, stdenv, ... } @ args: buildLinux (args // rec { - version = "4.4.270"; + version = "4.4.273"; extraMeta.branch = "4.4"; extraMeta.broken = stdenv.isAarch64; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "1lz48gv1v3wvw9xvd3y9q4py7ii1g9fj4dwyvvjdzbipyw7s21pq"; + sha256 = "1pd39cak0zhda3m9nvn9yxgd070wxvckaha5wl8pi7c8i6jfpclb"; }; kernelTests = args.kernelTests or [ nixosTests.kernel-generic.linux_4_4 ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.9.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.9.nix index 7dda6f5356..d614464bf2 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.9.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-4.9.nix @@ -1,13 +1,13 @@ { buildPackages, fetchurl, perl, buildLinux, nixosTests, stdenv, ... } @ args: buildLinux (args // rec { - version = "4.9.270"; + version = "4.9.273"; extraMeta.branch = "4.9"; extraMeta.broken = stdenv.isAarch64; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "0ck5abzpla291gcxrxjindj5szgcvmb2fwfilvdnzc6pnqk00ay3"; + sha256 = "0jjarv3xfkc21j1xhgch53w8wm6rq3xw1i03rjw9fv5i9k4x6qsw"; }; kernelTests = args.kernelTests or [ nixosTests.kernel-generic.linux_4_9 ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.10.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.10.nix index ae8f509530..e11b5db3d3 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.10.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.10.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "5.10.40"; + version = "5.10.45"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,7 +13,7 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; - sha256 = "091g9g29m4vh66bxihiylyprb3cxr8cy4m494klb2lkirlx8103l"; + sha256 = "01rmw5rnxyybr8sh0v9rgamrg71ign2nr7m0ilrq9704k6dj9dzj"; }; kernelTests = args.kernelTests or [ nixosTests.kernel-generic.linux_5_10 ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.12.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.12.nix index 80a25ad239..5cc25f4a6d 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.12.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.12.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "5.12.7"; + version = "5.12.12"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,7 +13,7 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; - sha256 = "0ircrclggrbmm80vz7irhg73qvhjddsmf7zclw5cqnnmm3qfj8jk"; + sha256 = "1a1ymbgkp8ngrkf7cfjrn56zb9qz1mm1j1pmd60g85ln7nyb4ai1"; }; kernelTests = args.kernelTests or [ nixosTests.kernel-generic.linux_5_12 ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.11.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.13.nix similarity index 81% rename from third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.11.nix rename to third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.13.nix index e6a8aef650..eb01fb6289 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.11.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.13.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "5.11.22"; + version = "5.13"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,8 +13,9 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; - sha256 = "003nlphkqish6l4xblhi369v4qv2zck7529prkdnx4gb2ihpq0hi"; + sha256 = "sha256-P2uql/N1GEOfUd8uTz1lqCLKX/AWqo5g0sxTuVpsidk="; }; - kernelTests = args.kernelTests or [ nixosTests.kernel-generic.linux_5_11 ]; -} // (args.argsOverride or {})) + kernelTests = args.kernelTests or [ nixosTests.kernel-generic.linux_5_13 ]; +} // (args.argsOverride or { })) + diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.4.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.4.nix index a245ee7c44..377a530834 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.4.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-5.4.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "5.4.122"; + version = "5.4.127"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,7 +13,7 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; - sha256 = "00g6s3ymriwddshy5sd458b1wfvw2ynxv6dr63ziykwfq50jlr9p"; + sha256 = "1gr89x1ymxaslp9fqcchaa7939yvhxy67z3pgskmx6z2vrd9pgd0"; }; kernelTests = args.kernelTests or [ nixosTests.kernel-generic.linux_5_4 ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-libre.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-libre.nix index 6d1c733972..76b5c1cf14 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-libre.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-libre.nix @@ -1,8 +1,8 @@ { stdenv, lib, fetchsvn, linux , scripts ? fetchsvn { url = "https://www.fsfla.org/svn/fsfla/software/linux-libre/releases/branches/"; - rev = "18096"; - sha256 = "08m7afj0h9bcgg8rx8ksp85hmaqjl4k4p4q4zy6x51788xn4mycg"; + rev = "18132"; + sha256 = "01mgpfx5cddq4bgffydkxpm3xlgf7zfjr1c1icsyn7f2pibd114q"; } , ... }: diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-lqx.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-lqx.nix index 4bc5cee444..609dc494c6 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-lqx.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-lqx.nix @@ -1,7 +1,7 @@ { lib, fetchFromGitHub, buildLinux, linux_zen, ... } @ args: let - version = "5.11.21"; + version = "5.12.9"; suffix = "lqx1"; in @@ -14,13 +14,13 @@ buildLinux (args // { owner = "zen-kernel"; repo = "zen-kernel"; rev = "v${version}-${suffix}"; - sha256 = "1klvik8nrqsqi5ijnga1li4gacsknmap75g2zp8f3hd3hz18d5n1"; + sha256 = "sha256-qmX66nz+gVOt1RGsUT9fA3wPUT7I9Z4jhxpybP0I8Cw="; }; extraMeta = { - branch = "5.10/master"; + branch = "5.12/master"; maintainers = with lib.maintainers; [ atemu ]; description = linux_zen.meta.description + " (Same as linux_zen but less aggressive release schedule)"; }; -} // (args.argsOverride or {})) +} // (args.argsOverride or { })) diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-rt-5.10.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-rt-5.10.nix index 90c0c4e293..5567022edc 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-rt-5.10.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-rt-5.10.nix @@ -6,7 +6,7 @@ , ... } @ args: let - version = "5.10.35-rt39"; # updated by ./update-rt.sh + version = "5.10.41-rt42"; # updated by ./update-rt.sh branch = lib.versions.majorMinor version; kversion = builtins.elemAt (lib.splitString "-" version) 0; in buildLinux (args // { @@ -18,14 +18,14 @@ in buildLinux (args // { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${kversion}.tar.xz"; - sha256 = "1zcqsjzqgcvlhkjwhzs6sxgbhzkfg898pbisivjqfymp8nfs2dxc"; + sha256 = "0wb739q7dha8nxkd72x42k4in5nw633yw065ppwc8rq7x2fpa17n"; }; kernelPatches = let rt-patch = { name = "rt"; patch = fetchurl { url = "mirror://kernel/linux/kernel/projects/rt/${branch}/older/patch-${version}.patch.xz"; - sha256 = "03gq9y111k4js4cc87yc9y7hyg1wxwbc1bjyjdvb4nrx2wqka79y"; + sha256 = "1z8jgsq5fkg486xxawg4c4wk1l9xra7x1cfqaf4grhw0csbbx883"; }; }; in [ rt-patch ] ++ lib.remove rt-patch kernelPatches; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-rt-5.4.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-rt-5.4.nix index 34efc8e21e..8592ad4c3b 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-rt-5.4.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-rt-5.4.nix @@ -6,7 +6,7 @@ , ... } @ args: let - version = "5.4.115-rt57"; # updated by ./update-rt.sh + version = "5.4.123-rt59"; # updated by ./update-rt.sh branch = lib.versions.majorMinor version; kversion = builtins.elemAt (lib.splitString "-" version) 0; in buildLinux (args // { @@ -14,14 +14,14 @@ in buildLinux (args // { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${kversion}.tar.xz"; - sha256 = "1llxk04vlpi7a4ca2f5vlcxfn68n8yhmsar3hsl259i7hms28isv"; + sha256 = "1pi223dls52piw65s3v4ml23wdyy73xpbdvp511187b6zgzk7zlf"; }; kernelPatches = let rt-patch = { name = "rt"; patch = fetchurl { url = "mirror://kernel/linux/kernel/projects/rt/${branch}/older/patch-${version}.patch.xz"; - sha256 = "1xh7xi27q58njhfayi2lnk4id7hnlklkgh2zx012gxv4ari76g0k"; + sha256 = "1m1mnmk7h35p7dv6mg3pla6pw3b645hbbccjmp1jc3fyn6qiy6fq"; }; }; in [ rt-patch ] ++ lib.remove rt-patch kernelPatches; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-testing.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-testing.nix index f0d4186934..4e2ef7b465 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-testing.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-testing.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "5.12-rc6"; + version = "5.13-rc6"; extraMeta.branch = "5.12"; # modDirVersion needs to be x.y.z, will always add .0 @@ -11,7 +11,7 @@ buildLinux (args // rec { src = fetchurl { url = "https://git.kernel.org/torvalds/t/linux-${version}.tar.gz"; - sha256 = "0w0zk2byimdbcvn8myqaq0ab6lyd43493fnkv9a1407dimpxb03d"; + sha256 = "sha256-PunFd6tOsmrsPItp2QX4TEVxHnvvi1BMSwWio/DTlMU="; }; kernelTests = args.kernelTests or [ nixosTests.kernel-generic.linux_testing ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-xanmod.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-xanmod.nix index aa8988fae8..b389532c01 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-xanmod.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-xanmod.nix @@ -1,27 +1,55 @@ { lib, stdenv, buildLinux, fetchFromGitHub, ... } @ args: let - version = "5.12.8"; + version = "5.12.13"; suffix = "xanmod1-cacule"; in buildLinux (args // rec { - modDirVersion = "${version}-${suffix}"; inherit version; + modDirVersion = "${version}-${suffix}"; src = fetchFromGitHub { owner = "xanmod"; repo = "linux"; rev = modDirVersion; - sha256 = "sha256-i3exBrEKyTHM2Iq8AJEIHwaw6KJarfcahlm/pPxAhmo="; - extraPostFetch = '' - rm $out/.config - ''; + sha256 = "sha256-eFIWlguU1hnkAgTbRxSMTStq0X7XW4IT1/9XlQSgdMQ="; + }; + + structuredExtraConfig = with lib.kernel; { + + # Preemptive Full Tickless Kernel at 500Hz + PREEMPT_VOLUNTARY = lib.mkForce no; + PREEMPT = lib.mkForce yes; + NO_HZ_FULL = yes; + HZ_500 = yes; + + # Google's Multigenerational LRU Framework + LRU_GEN = yes; + LRU_GEN_ENABLED = yes; + + # Google's BBRv2 TCP congestion Control + TCP_CONG_BBR2 = yes; + DEFAULT_BBR2 = yes; + + # FQ-PIE Packet Scheduling + NET_SCH_DEFAULT = yes; + DEFAULT_FQ_PIE = yes; + + # Graysky's additional CPU optimizations + CC_OPTIMIZE_FOR_PERFORMANCE_O3 = yes; + + # Android Ashmem and Binder IPC Driver as module for Anbox + ASHMEM = module; + ANDROID = yes; + ANDROID_BINDER_IPC = module; + ANDROID_BINDERFS = module; + ANDROID_BINDER_DEVICES = freeform "binder,hwbinder,vndbinder"; }; extraMeta = { branch = "5.12-cacule"; maintainers = with lib.maintainers; [ fortuneteller2k ]; description = "Built with custom settings and new features built to provide a stable, responsive and smooth desktop experience"; - broken = stdenv.hostPlatform.isAarch64; + broken = stdenv.isAarch64; }; } // (args.argsOverride or { })) diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-zen.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-zen.nix index b28400819d..47e72a61c1 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-zen.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/linux-zen.nix @@ -1,7 +1,7 @@ { lib, fetchFromGitHub, buildLinux, ... } @ args: let - version = "5.11.16"; + version = "5.12.9"; suffix = "zen1"; in @@ -14,13 +14,13 @@ buildLinux (args // { owner = "zen-kernel"; repo = "zen-kernel"; rev = "v${version}-${suffix}"; - sha256 = "0jyicnpqccn194jrm1mc4zq0cil7ls9l57ws3nv783vlk7b0k3gv"; + sha256 = "sha256-Sbe7pY/htLRRx5Qs78BpEzNCSIEsnZMj1+bkAftZdbQ="; }; extraMeta = { - branch = "5.10/master"; + branch = "5.12/master"; maintainers = with lib.maintainers; [ atemu andresilva ]; description = "Built using the best configuration and kernel sources for desktop, multimedia, and gaming workloads."; }; -} // (args.argsOverride or {})) +} // (args.argsOverride or { })) diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/patches.nix b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/patches.nix index f41cedca0f..48dd9b38d9 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/kernel/patches.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/kernel/patches.nix @@ -102,4 +102,13 @@ name = "mac_nvme_t2"; patch = ./mac-nvme-t2.patch; }; + + rtnetlink_fix_regression_in_bridge_vlan_configuration = rec { + name = "rtnetlink_fix_regression_in_bridge_vlan_configuration"; + patch = fetchpatch { + name = name + ".patch"; + url = "https://git.kernel.org/pub/scm/linux/kernel/git/torvalds/linux.git/patch/?id=d2e381c4963663bca6f30c3b996fa4dbafe8fcb5"; + sha256 = "0ragdi13yh5ypp9x49vrdjqx8ddh7sq7i1qjp8fyrbk3n0jdaac3"; + }; + }; } diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/libratbag/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/libratbag/default.nix index 14773d6944..a264c45448 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/libratbag/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/libratbag/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "libratbag"; - version = "0.15"; + version = "0.16"; src = fetchFromGitHub { owner = "libratbag"; repo = "libratbag"; rev = "v${version}"; - sha256 = "0z6ps5aqwjmbdvahs80fh9cdgcvp4q4w3kfycmzv4kzgzihjki7b"; + sha256 = "sha256-wJLG0Gxm1RWwW5SCGoa2QscU1VC0r93KZfEMNVg3Tko="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/lttng-modules/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/lttng-modules/default.nix index 8e20ffda34..7f4036c775 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/lttng-modules/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/lttng-modules/default.nix @@ -1,13 +1,12 @@ { lib, stdenv, fetchurl, kernel }: stdenv.mkDerivation rec { - pname = "lttng-modules-${version}"; - name = "${pname}-${kernel.version}"; - version = "2.10.5"; + pname = "lttng-modules-${kernel.version}"; + version = "2.12.6"; src = fetchurl { url = "https://lttng.org/files/lttng-modules/lttng-modules-${version}.tar.bz2"; - sha256 = "07rs01zwr4bmjamplix5qz1c6mb6wdawb68vyn0w6wx68ppbpnxq"; + sha256 = "sha256-lawqLPkthdI/+9rKah7A18FnIR0eD7hQq5AASj9HXqo="; }; buildInputs = kernel.moduleBuildDependencies; @@ -28,11 +27,8 @@ stdenv.mkDerivation rec { meta = with lib; { description = "Linux kernel modules for LTTng tracing"; homepage = "https://lttng.org/"; - license = with licenses; [ lgpl21 gpl2 mit ]; + license = with licenses; [ lgpl21Only gpl2Only mit ]; platforms = platforms.linux; maintainers = [ maintainers.bjornfor ]; - broken = builtins.compareVersions kernel.version "3.18" == -1 - || builtins.compareVersions kernel.version "4.16" == 1; }; - } diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/mdevd/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/mdevd/default.nix index b88e3ad1e6..58299ba5e8 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/mdevd/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/mdevd/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "mdevd"; - version = "0.1.3.0"; - sha256 = "0spvw27xxd0m6j8bl8xysmgsx18fl769smr6dsh25s2d5h3sp2dy"; + version = "0.1.4.0"; + sha256 = "1lnwk7qa6x7iia0v12i2jckg42ypi35hk3sa7cjm23ngnhiv5lzz"; description = "mdev-compatible Linux hotplug manager daemon"; platforms = lib.platforms.linux; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/microcode/intel.nix b/third_party/nixpkgs/pkgs/os-specific/linux/microcode/intel.nix index 3ac8e6dcd4..f8bb7c67d8 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/microcode/intel.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/microcode/intel.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "microcode-intel"; - version = "20210216"; + version = "20210608"; src = fetchFromGitHub { owner = "intel"; repo = "Intel-Linux-Processor-Microcode-Data-Files"; rev = "microcode-${version}"; - sha256 = "17wrfp7h7xbvncgm1fp103zkyz9n1f820jy6yca1aq208264hjkv"; + sha256 = "08nk353z2lcqsjbm2qdsfapfgrvlfw0rj7r9scr9pllzkjj5n9x3"; }; nativeBuildInputs = [ iucode-tool libarchive ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/mwprocapture/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/mwprocapture/default.nix index e97dcad43d..ca5b82b878 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/mwprocapture/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/mwprocapture/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, kernel, alsaLib }: +{ lib, stdenv, fetchurl, kernel, alsa-lib }: with lib; @@ -7,7 +7,7 @@ let if stdenv.is64bit then "64" else "32"; - libpath = makeLibraryPath [ stdenv.cc.cc stdenv.glibc alsaLib ]; + libpath = makeLibraryPath [ stdenv.cc.cc stdenv.glibc alsa-lib ]; in stdenv.mkDerivation rec { diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/nftables/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/nftables/default.nix index bb5e3f5196..f5fdee14c1 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/nftables/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/nftables/default.nix @@ -10,12 +10,12 @@ with lib; stdenv.mkDerivation rec { - version = "0.9.8"; + version = "0.9.9"; pname = "nftables"; src = fetchurl { url = "https://netfilter.org/projects/nftables/files/${pname}-${version}.tar.bz2"; - sha256 = "1r4g22grhd4s1918wws9vggb8821sv4kkj8197ygxr6sar301z30"; + sha256 = "1d7iwc8xlyfsbgn6qx1sdfcq7jhpl8wpfj39hcd06y8dzp3jvvvn"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/nixos-rebuild/nixos-rebuild.sh b/third_party/nixpkgs/pkgs/os-specific/linux/nixos-rebuild/nixos-rebuild.sh old mode 100644 new mode 100755 index 02614aea6d..69e0dee1d2 --- a/third_party/nixpkgs/pkgs/os-specific/linux/nixos-rebuild/nixos-rebuild.sh +++ b/third_party/nixpkgs/pkgs/os-specific/linux/nixos-rebuild/nixos-rebuild.sh @@ -24,7 +24,6 @@ fast= rollback= upgrade= upgrade_all= -repair= profile=/nix/var/nix/profiles/system buildHost= targetHost= @@ -60,10 +59,6 @@ while [ "$#" -gt 0 ]; do upgrade=1 upgrade_all=1 ;; - --repair) - repair=1 - extraBuildFlags+=("$i") - ;; --max-jobs|-j|--cores|-I|--builders) j="$1"; shift 1 extraBuildFlags+=("$i" "$j") @@ -144,7 +139,7 @@ buildHostCmd() { if [ -z "$buildHost" ]; then "$@" elif [ -n "$remoteNix" ]; then - ssh $SSHOPTS "$buildHost" env PATH="$remoteNix":'$PATH' "${maybeSudo[@]}" "$@" + ssh $SSHOPTS "$buildHost" "${maybeSudo[@]}" env PATH="$remoteNix":'$PATH' "$@" else ssh $SSHOPTS "$buildHost" "${maybeSudo[@]}" "$@" fi @@ -176,6 +171,7 @@ nixBuild() { else local instArgs=() local buildArgs=() + local drv= while [ "$#" -gt 0 ]; do local i="$1"; shift 1 @@ -202,7 +198,7 @@ nixBuild() { esac done - local drv="$(nix-instantiate "${instArgs[@]}" "${extraBuildFlags[@]}")" + drv="$(nix-instantiate "${instArgs[@]}" "${extraBuildFlags[@]}")" if [ -a "$drv" ]; then NIX_SSHOPTS=$SSHOPTS nix-copy-closure --to "$buildHost" "$drv" buildHostCmd nix-store -r "$drv" "${buildArgs[@]}" @@ -214,14 +210,21 @@ nixBuild() { } nixFlakeBuild() { - if [ -z "$buildHost" ]; then - nix build "$@" --out-link "${tmpDir}/result" + if [[ -z "$buildHost" && -z "$targetHost" ]] && + ! [ "$action" = switch -o "$action" = boot ] + then + nix "${flakeFlags[@]}" build "$@" + readlink -f ./result + elif [ -z "$buildHost" ]; then + nix "${flakeFlags[@]}" build "$@" --out-link "${tmpDir}/result" readlink -f "${tmpDir}/result" else local attr="$1" shift 1 local evalArgs=() local buildArgs=() + local drv= + while [ "$#" -gt 0 ]; do local i="$1"; shift 1 case "$i" in @@ -243,7 +246,7 @@ nixFlakeBuild() { esac done - local drv="$(nix "${flakeFlags[@]}" eval --raw "${attr}.drvPath" "${evalArgs[@]}" "${extraBuildArgs[@]}")" + drv="$(nix "${flakeFlags[@]}" eval --raw "${attr}.drvPath" "${evalArgs[@]}" "${extraBuildFlags[@]}")" if [ -a "$drv" ]; then NIX_SSHOPTS=$SSHOPTS nix "${flakeFlags[@]}" copy --derivation --to "ssh://$buildHost" "$drv" buildHostCmd nix-store -r "$drv" "${buildArgs[@]}" @@ -310,7 +313,7 @@ fi if [[ -z $_NIXOS_REBUILD_REEXEC && -n $canRun && -z $fast && -z $flake ]]; then if p=$(nix-build --no-out-link --expr 'with import {}; config.system.build.nixos-rebuild' "${extraBuildFlags[@]}"); then export _NIXOS_REBUILD_REEXEC=1 - exec $p/bin/nixos-rebuild "${origArgs[@]}" + exec "$p/bin/nixos-rebuild" "${origArgs[@]}" exit 1 fi fi @@ -393,14 +396,12 @@ prebuiltNix() { fi } -remotePATH= - if [[ -n $buildNix && -z $flake ]]; then echo "building Nix..." >&2 nixDrv= - if ! nixDrv="$(nix-instantiate '' --add-root $tmpDir/nix.drv --indirect -A config.nix.package.out "${extraBuildFlags[@]}")"; then - if ! nixDrv="$(nix-instantiate '' --add-root $tmpDir/nix.drv --indirect -A nix "${extraBuildFlags[@]}")"; then - if ! nixStorePath="$(nix-instantiate --eval '' -A $(nixSystem) | sed -e 's/^"//' -e 's/"$//')"; then + if ! nixDrv="$(nix-instantiate '' --add-root "$tmpDir/nix.drv" --indirect -A config.nix.package.out "${extraBuildFlags[@]}")"; then + if ! nixDrv="$(nix-instantiate '' --add-root "$tmpDir/nix.drv" --indirect -A nix "${extraBuildFlags[@]}")"; then + if ! nixStorePath="$(nix-instantiate --eval '' -A "$(nixSystem)" | sed -e 's/^"//' -e 's/"$//')"; then nixStorePath="$(prebuiltNix "$(uname -m)")" fi if ! nix-store -r $nixStorePath --add-root $tmpDir/nix --indirect \ @@ -408,11 +409,11 @@ if [[ -n $buildNix && -z $flake ]]; then echo "warning: don't know how to get latest Nix" >&2 fi # Older version of nix-store -r don't support --add-root. - [ -e $tmpDir/nix ] || ln -sf $nixStorePath $tmpDir/nix + [ -e "$tmpDir/nix" ] || ln -sf "$nixStorePath" "$tmpDir/nix" if [ -n "$buildHost" ]; then remoteNixStorePath="$(prebuiltNix "$(buildHostCmd uname -m)")" remoteNix="$remoteNixStorePath/bin" - if ! buildHostCmd nix-store -r $remoteNixStorePath \ + if ! buildHostCmd nix-store -r "$remoteNixStorePath" \ --option extra-binary-caches https://cache.nixos.org/ >/dev/null; then remoteNix= echo "warning: don't know how to get latest Nix" >&2 @@ -421,7 +422,7 @@ if [[ -n $buildNix && -z $flake ]]; then fi fi if [ -a "$nixDrv" ]; then - nix-store -r "$nixDrv"'!'"out" --add-root $tmpDir/nix --indirect >/dev/null + nix-store -r "$nixDrv"'!'"out" --add-root "$tmpDir/nix" --indirect >/dev/null if [ -n "$buildHost" ]; then nix-copy-closure --to "$buildHost" "$nixDrv" # The nix build produces multiple outputs, we add them all to the remote path @@ -438,7 +439,7 @@ fi # nixos-version shows something useful). if [[ -n $canRun && -z $flake ]]; then if nixpkgs=$(nix-instantiate --find-file nixpkgs "${extraBuildFlags[@]}"); then - suffix=$($SHELL $nixpkgs/nixos/modules/installer/tools/get-version-suffix "${extraBuildFlags[@]}" || true) + suffix=$($SHELL "$nixpkgs/nixos/modules/installer/tools/get-version-suffix" "${extraBuildFlags[@]}" || true) if [ -n "$suffix" ]; then echo -n "$suffix" > "$nixpkgs/.version-suffix" || true fi @@ -511,7 +512,7 @@ fi # If we're not just building, then make the new configuration the boot # default and/or activate it now. if [ "$action" = switch -o "$action" = boot -o "$action" = test -o "$action" = dry-activate ]; then - if ! targetHostCmd $pathToConfig/bin/switch-to-configuration "$action"; then + if ! targetHostCmd "$pathToConfig/bin/switch-to-configuration" "$action"; then echo "warning: error(s) occurred while switching to the new configuration" >&2 exit 1 fi diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/nvidia-x11/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/nvidia-x11/default.nix index 8fc439aeb3..2cf9cddef4 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/nvidia-x11/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/nvidia-x11/default.nix @@ -27,10 +27,10 @@ rec { else legacy_390; beta = generic { - version = "465.31"; - sha256_64bit = "YAjQAckzWGMEnDOOe6arlkBvT3rzFCeqjBjG0ncnLNo="; - settingsSha256 = "33zHXxfG/t6REbHqhYjzBhtuus7jP34r2wK90sBT9vE="; - persistencedSha256 = "1r/QqjOxg6836mQ46hNsPscKliNAtpN9xW6M++02woY="; + version = "470.42.01"; + sha256_64bit = "04w9nmi3vyww07pmgbd2r1x37s5p6xiy4qg9s06a1kjwzpm59xfd"; + settingsSha256 = "Ohbkm7j0/V0kzcxfsHujBkrdnaefneoLutf2Rju2hIQ="; + persistencedSha256 = "1gfj4ffkidbhgjzdi6sv2sngdcb27w7b0rvfnj129rs36mcxy02j"; }; # Vulkan developer beta driver diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/open-iscsi/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/open-iscsi/default.nix index f510c03d99..0640316b62 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/open-iscsi/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/open-iscsi/default.nix @@ -4,7 +4,7 @@ stdenv.mkDerivation rec { pname = "open-iscsi"; - version = "2.1.3"; + version = "2.1.4"; nativeBuildInputs = [ autoconf automake gettext libtool perl pkgconf ]; buildInputs = [ kmod open-isns.lib openssl systemd util-linux ]; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { owner = "open-iscsi"; repo = "open-iscsi"; rev = version; - sha256 = "14rcf4xmrmz522z57sm8bb3mn79dqsdwz84rl6id84fgjbwbsp6b"; + sha256 = "sha256-HnvLLwxOnu7Oiige6A6zk9NmAI2ImcILp9eCfbdGiyI="; }; DESTDIR = "$(out)"; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/pommed-light/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/pommed-light/default.nix index 9e9cf149fe..0797656f65 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/pommed-light/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/pommed-light/default.nix @@ -2,7 +2,7 @@ , fetchFromGitHub , pciutils , libconfuse -, alsaLib +, alsa-lib , audiofile , pkg-config , zlib @@ -32,7 +32,7 @@ stdenv.mkDerivation rec { buildInputs = [ pciutils libconfuse - alsaLib + alsa-lib audiofile zlib eject diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/rdma-core/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/rdma-core/default.nix index dff451a01d..25a8f3bdaf 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/rdma-core/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/rdma-core/default.nix @@ -3,7 +3,7 @@ } : let - version = "34.0"; + version = "35.0"; in stdenv.mkDerivation { pname = "rdma-core"; @@ -13,7 +13,7 @@ in stdenv.mkDerivation { owner = "linux-rdma"; repo = "rdma-core"; rev = "v${version}"; - sha256 = "sha256-2HFtj595sDmWqAewIMwKMaiSDVVWKdQA9l0QsPcw8qA="; + sha256 = "0ra0m1s0029qgcq0li7md6pkri7pcc4iy3cd6jrrqs9c6n1clnnd"; }; nativeBuildInputs = [ cmake pkg-config pandoc docutils ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/rtl8188eus-aircrack/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/rtl8188eus-aircrack/default.nix new file mode 100644 index 0000000000..93a91f0447 --- /dev/null +++ b/third_party/nixpkgs/pkgs/os-specific/linux/rtl8188eus-aircrack/default.nix @@ -0,0 +1,39 @@ +{ lib, stdenv, fetchFromGitHub, kernel, bc }: + +stdenv.mkDerivation { + pname = "rtl8188eus-aircrack"; + version = "${kernel.version}-unstable-2021-05-04"; + + src = fetchFromGitHub { + owner = "aircrack-ng"; + repo = "rtl8188eus"; + rev = "6146193406b62e942d13d4d43580ed94ac70c218"; + sha256 = "sha256-85STELbFB7QmTaM8GvJNlWvAg6KPAXeYRiMb4cGA6RY="; + }; + + nativeBuildInputs = [ bc ]; + + buildInputs = kernel.moduleBuildDependencies; + + hardeningDisable = [ "pic" ]; + + prePatch = '' + substituteInPlace ./Makefile \ + --replace /lib/modules/ "${kernel.dev}/lib/modules/" \ + --replace '$(shell uname -r)' "${kernel.modDirVersion}" \ + --replace /sbin/depmod \# \ + --replace '$(MODDESTDIR)' "$out/lib/modules/${kernel.modDirVersion}/kernel/net/wireless/" + ''; + + preInstall = '' + mkdir -p "$out/lib/modules/${kernel.modDirVersion}/kernel/net/wireless/" + ''; + + meta = with lib; { + description = "RealTek RTL8188eus WiFi driver with monitor mode & frame injection support"; + homepage = "https://github.com/aircrack-ng/rtl8188eus"; + license = licenses.gpl2Only; + maintainers = with maintainers; [ fortuneteller2k ]; + broken = kernel.isHardened; + }; +} diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/rtl8821ce/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/rtl8821ce/default.nix index b94bd3128e..b4def6f001 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/rtl8821ce/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/rtl8821ce/default.nix @@ -1,14 +1,14 @@ { lib, stdenv, fetchFromGitHub, kernel, bc }: stdenv.mkDerivation rec { - pname = "rtl8821ce-${kernel.version}"; - version = "unstable-2021-03-21"; + pname = "rtl8821ce"; + version = "${kernel.version}-unstable-2021-05-28"; src = fetchFromGitHub { owner = "tomaspinho"; repo = "rtl8821ce"; - rev = "897e7c4c15dd5a0a569745dc223d969a26ff5bfc"; - sha256 = "0935dzz0njxh78wfd17yqah1dxn6b3kaszvzclwwrwwhwcrdp80j"; + rev = "f93db734666f75ebf65e44ceb943c19b598b1647"; + sha256 = "sha256-cqXV52U+6Jl9Jje1nEOYDvmH4rgA1QdrwNCfYeul3hU="; }; hardeningDisable = [ "pic" ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/s6-linux-init/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/s6-linux-init/default.nix index 41790e5eb7..5d6941259e 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/s6-linux-init/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/s6-linux-init/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6-linux-init"; - version = "1.0.6.1"; - sha256 = "0sq8ya39a1qs61cdjns8ijwrvxnqd4snk2ab4j5wl9a87i7wixhn"; + version = "1.0.6.2"; + sha256 = "06xcmn2a89fvng056lcnnyrl2ak0y7cblkc90lj9a2liyhawy9dr"; description = "A set of minimalistic tools used to create a s6-based init system, including a /sbin/init binary, on a Linux kernel"; platforms = lib.platforms.linux; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/s6-linux-utils/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/s6-linux-utils/default.nix index 132a0b4957..3596ab23e7 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/s6-linux-utils/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/s6-linux-utils/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6-linux-utils"; - version = "2.5.1.4"; - sha256 = "02gxzc9igid2kf2rvm3v6kc9806mpjmdq7cpanv4cml0ip68vbfq"; + version = "2.5.1.5"; + sha256 = "1fj5ldlrc6bx40pphg29rp3byd6fal6869v85kw86c2kdgrxn063"; description = "A set of minimalistic Linux-specific system utilities"; platforms = lib.platforms.linux; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/sd-switch/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/sd-switch/default.nix index d4b3d9116b..987f32664c 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/sd-switch/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/sd-switch/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "sd-switch"; - version = "0.2.2"; + version = "0.2.3"; src = fetchFromGitLab { owner = "rycee"; repo = pname; rev = version; - sha256 = "0vqvwly1vidzl3d89s7jysd5lc29d6skd52pf5ibxfwhrir50sw0"; + sha256 = "12h2d7v7pdz7b0hrna64561kf35nbpwb2kzxa791xk8raxc2b72k"; }; - cargoSha256 = "1m08qrz2qhf71d1fxw08wc93gfyj0hrh2hp3s17g4g1cw0jvcmm5"; + cargoSha256 = "12ny3cir2nxzrmf4vwq6sgc35dbpq88hav53xqdp44rigdf4vzbs"; nativeBuildInputs = [ pkg-config ]; buildInputs = [ dbus ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/system76-power/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/system76-power/default.nix new file mode 100644 index 0000000000..fbc26ca871 --- /dev/null +++ b/third_party/nixpkgs/pkgs/os-specific/linux/system76-power/default.nix @@ -0,0 +1,30 @@ +{ pkg-config, libusb1, dbus, lib, rustPlatform, fetchFromGitHub }: + +rustPlatform.buildRustPackage rec { + pname = "system76-power"; + version = "1.1.16"; + + src = fetchFromGitHub { + owner = "pop-os"; + repo = "system76-power"; + rev = version; + sha256 = "sha256-OtrhvUkNNgg6KlrqjwiBKL4zuQZBWevb0xgtSlEW2rQ="; + }; + + nativeBuildInputs = [ pkg-config ]; + buildInputs = [ dbus libusb1 ]; + + cargoSha256 = "sha256-ImACDbnUbwc0ZXgF3xxzes8+vUjt76B1xxgqzhgAYX4="; + + postInstall = '' + install -D -m 0644 data/system76-power.conf $out/etc/dbus-1/system.d/system76-power.conf + ''; + + meta = with lib; { + description = "System76 Power Management"; + homepage = "https://github.com/pop-os/system76-power"; + license = licenses.gpl3Plus; + platforms = [ "i686-linux" "x86_64-linux" ]; + maintainers = [ maintainers.jwoudenberg ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/tuigreet/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/tuigreet/default.nix index a904eb8b9b..daa5a4faa9 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/tuigreet/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/tuigreet/default.nix @@ -5,16 +5,16 @@ rustPlatform.buildRustPackage rec { pname = "tuigreet"; - version = "0.2.0"; + version = "0.4.0"; src = fetchFromGitHub { owner = "apognu"; repo = pname; rev = version; - sha256 = "1fk8ppxr3a8vdp7g18pp3sgr8b8s11j30mcqpdap4ai14v19idh8"; + sha256 = "1v16gl6ajqdbl265nh8akr2far5qhiqv7787hvqlzpr3rd39vnij"; }; - cargoSha256 = "1ds5rcxg7qn799zp0jdn9ifkdzh9h5ibsqh688dvrqyzrsfz6x7m"; + cargoSha256 = "072zvvgf9m1afjz15m8pwslh2mav37ahjqgg33pdvzdnvg5j1q2h"; meta = with lib; { description = "Graphical console greter for greetd"; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/tuna/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/tuna/default.nix new file mode 100644 index 0000000000..0e621a24f0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/os-specific/linux/tuna/default.nix @@ -0,0 +1,62 @@ +{ lib +, buildPythonApplication +, fetchgit +, pygobject3 +, pytestCheckHook +, gdk-pixbuf +, glib +, gobject-introspection +, gtk3 +, python-linux-procfs +, python-ethtool +, wrapGAppsHook +}: + +buildPythonApplication rec { + pname = "tuna"; + version = "0.15"; + + src = fetchgit { + url = "https://git.kernel.org/pub/scm/utils/${pname}/${pname}.git"; + rev = "v${version}"; + sha256 = "sha256-lRHlbdCQ0NcjcWgLvCze67kN8NsK0f5RmKfPbkHhk78="; + }; + + patchPhase = '' + mv tuna-cmd.py tuna/cmd.py + + substituteInPlace setup.py \ + --replace 'packages = ["tuna", "tuna/gui"],' \ + 'packages = ["tuna", "tuna/gui"], entry_points={"console_scripts":["tuna=tuna.cmd:main"]},' + + substituteInPlace tuna/tuna_gui.py \ + --replace "self.binpath + 'pkexec'" "'/run/wrappers/bin/pkexec'" \ + --replace 'tuna_glade_dirs = [".", "tuna", "/usr/share/tuna"]' "tuna_glade_dirs = [ \"$out/share/tuna\" ]" + ''; + + nativeBuildInputs = [ + glib.dev + gobject-introspection + gtk3 + wrapGAppsHook + ]; + + propagatedBuildInputs = [ pygobject3 python-linux-procfs python-ethtool ]; + + postInstall = '' + mkdir -p $out/share/tuna + cp tuna/tuna_gui.glade $out/share/tuna/ + ''; + + # contains no tests + doCheck = false; + pythonImportsCheck = [ "tuna" ]; + + meta = with lib; { + description = "Thread and IRQ affinity setting GUI and cmd line tool"; + homepage = "https://git.kernel.org/pub/scm/utils/tuna/tuna.git"; + license = licenses.gpl2Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ elohmeier ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/v4l-utils/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/v4l-utils/default.nix index 81a5f74c42..90a052fdef 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/v4l-utils/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/v4l-utils/default.nix @@ -1,7 +1,7 @@ { stdenv, lib, fetchurl, pkg-config, perl , libjpeg, udev , withUtils ? true -, withGUI ? true, alsaLib, libX11, qtbase, libGLU, wrapQtAppsHook +, withGUI ? true, alsa-lib, libX11, qtbase, libGLU, wrapQtAppsHook }: # See libv4l in all-packages.nix for the libs only (overrides alsa, libX11 & QT) @@ -35,7 +35,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config perl ] ++ lib.optional withQt wrapQtAppsHook; - buildInputs = [ udev ] ++ lib.optionals withQt [ alsaLib libX11 qtbase libGLU ]; + buildInputs = [ udev ] ++ lib.optionals withQt [ alsa-lib libX11 qtbase libGLU ]; propagatedBuildInputs = [ libjpeg ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/v4l2loopback/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/v4l2loopback/default.nix index 73b2f58951..53f37e805f 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/v4l2loopback/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/v4l2loopback/default.nix @@ -1,14 +1,14 @@ { lib, stdenv, fetchFromGitHub, kernel, kmod }: stdenv.mkDerivation rec { - name = "v4l2loopback-${version}-${kernel.version}"; - version = "0.12.5"; + pname = "v4l2loopback"; + version = "unstable-2020-04-22-${kernel.version}"; src = fetchFromGitHub { owner = "umlaeute"; repo = "v4l2loopback"; - rev = "v${version}"; - sha256 = "1qi4l6yam8nrlmc3zwkrz9vph0xsj1cgmkqci4652mbpbzigg7vn"; + rev = "d26e624b4ead762d34152f9f825b3a51fb92fb9c"; + sha256 = "sha256-OA45vmuVieoL7J83D3TD5qi3SBsiqi0kiQn4i1K6dVE="; }; hardeningDisable = [ "format" "pic" ]; @@ -20,6 +20,7 @@ stdenv.mkDerivation rec { ''; nativeBuildInputs = kernel.moduleBuildDependencies; + buildInputs = [ kmod ]; makeFlags = [ @@ -30,8 +31,8 @@ stdenv.mkDerivation rec { meta = with lib; { description = "A kernel module to create V4L2 loopback devices"; homepage = "https://github.com/umlaeute/v4l2loopback"; - license = licenses.gpl2; - maintainers = [ ]; + license = licenses.gpl2Only; + maintainers = with maintainers; [ fortuneteller2k ]; platforms = platforms.linux; }; } diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/veikk-linux-driver/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/veikk-linux-driver/default.nix new file mode 100644 index 0000000000..a1019d7b7f --- /dev/null +++ b/third_party/nixpkgs/pkgs/os-specific/linux/veikk-linux-driver/default.nix @@ -0,0 +1,35 @@ +{ lib, stdenv, fetchFromGitHub, kernel }: + +stdenv.mkDerivation rec { + pname = "veikk-linux-driver"; + version = "2.0"; + + src = fetchFromGitHub { + owner = "jlam55555"; + repo = pname; + rev = "v${version}"; + sha256 = "11mg74ds58jwvdmi3i7c4chxs6v9g09r9ll22pc2kbxjdnrp8zrn"; + }; + + nativeBuildInputs = kernel.moduleBuildDependencies; + + buildInputs = [ kernel ]; + + buildPhase = '' + make BUILD_DIR=${kernel.dev}/lib/modules/${kernel.modDirVersion}/build + ''; + + installPhase = '' + mkdir -p $out/lib/modules/${kernel.modDirVersion}/kernel/drivers/veikk + install -Dm755 veikk.ko $out/lib/modules/${kernel.modDirVersion}/kernel/drivers/veikk + ''; + + meta = with lib; { + description = "Linux driver for VEIKK-brand digitizers"; + homepage = "https://github.com/jlam55555/veikk-linux-driver/"; + license = licenses.gpl2Only; + platforms = platforms.linux; + maintainers = with maintainers; [ nicbk ]; + broken = kernel.kernelOlder "4.19"; + }; +} diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/wireguard/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/wireguard/default.nix index 2578d09fc1..e183b4ac5d 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/wireguard/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/wireguard/default.nix @@ -7,11 +7,11 @@ assert lib.versionOlder kernel.version "5.6"; stdenv.mkDerivation rec { pname = "wireguard"; - version = "1.0.20210424"; + version = "1.0.20210606"; src = fetchzip { url = "https://git.zx2c4.com/wireguard-linux-compat/snapshot/wireguard-linux-compat-${version}.tar.xz"; - sha256 = "sha256-VLtIxYh308X28c9EOeHx0eA7HP2aRlekPXRt015/qAg="; + sha256 = "sha256-ha7x6+41oPRRhuRwEb1ojRWLF1dlEMoJtqXrzRKQ408="; }; hardeningDisable = [ "pic" ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/wlgreet/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/wlgreet/default.nix index 2bbf01b01c..4758945e41 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/wlgreet/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/wlgreet/default.nix @@ -5,16 +5,16 @@ rustPlatform.buildRustPackage rec { pname = "wlgreet"; - version = "2020-10-20"; + version = "0.3"; src = fetchFromSourcehut { owner = "~kennylevinsen"; repo = pname; - rev = "4425d296b81550cce01f044fbd7ff083e37550f4"; + rev = version; sha256 = "0n0lzg3y1z5s9s6kfkdj5q8w67bqpw08hqfccc5kz0ninzy9j0cc"; }; - cargoSha256 = "08m8r8wy7yg5lhmyfx4n0vaf99xv97vzrs774apyxxx2wkhbyjhg"; + cargoSha256 = "1lwy8xmkl9n3fj3wlf80wp728nn9p5rjnbgmm2cbpqxklcgbmxhm"; meta = with lib; { description = "Raw wayland greeter for greetd, to be run under sway or similar"; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/wpa_supplicant/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/wpa_supplicant/default.nix index 51af6abde8..1dbe281e09 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/wpa_supplicant/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/wpa_supplicant/default.nix @@ -1,6 +1,7 @@ { lib, stdenv, fetchurl, fetchpatch, openssl, pkg-config, libnl -, dbus, readline ? null, pcsclite ? null - +, withDbus ? true, dbus +, withReadline ? true, readline +, withPcsclite ? true, pcsclite , readOnlyModeSSIDs ? false }: @@ -87,16 +88,16 @@ stdenv.mkDerivation rec { CONFIG_TDLS=y CONFIG_BGSCAN_SIMPLE=y CONFIG_BGSCAN_LEARN=y - '' + optionalString (pcsclite != null) '' + '' + optionalString withPcsclite '' CONFIG_EAP_SIM=y CONFIG_EAP_AKA=y CONFIG_EAP_AKA_PRIME=y CONFIG_PCSC=y - '' + optionalString (dbus != null) '' + '' + optionalString withDbus '' CONFIG_CTRL_IFACE_DBUS=y CONFIG_CTRL_IFACE_DBUS_NEW=y CONFIG_CTRL_IFACE_DBUS_INTRO=y - '' + (if readline != null then '' + '' + (if withReadline then '' CONFIG_READLINE=y '' else '' CONFIG_WPA_CLI_EDIT=y @@ -113,10 +114,13 @@ stdenv.mkDerivation rec { substituteInPlace Makefile --replace /usr/local $out export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE \ -I$(echo "${lib.getDev libnl}"/include/libnl*/) \ - -I${lib.getDev pcsclite}/include/PCSC/" + ${optionalString withPcsclite "-I${lib.getDev pcsclite}/include/PCSC/"}" ''; - buildInputs = [ openssl libnl dbus readline pcsclite ]; + buildInputs = [ openssl libnl ] + ++ optional withDbus dbus + ++ optional withReadline readline + ++ optional withPcsclite pcsclite; nativeBuildInputs = [ pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/os-specific/linux/zfs/default.nix b/third_party/nixpkgs/pkgs/os-specific/linux/zfs/default.nix index e41ae3bece..73c3f82e8b 100644 --- a/third_party/nixpkgs/pkgs/os-specific/linux/zfs/default.nix +++ b/third_party/nixpkgs/pkgs/os-specific/linux/zfs/default.nix @@ -6,7 +6,7 @@ # Userspace dependencies , zlib, libuuid, python3, attr, openssl , libtirpc -, nfs-utils +, nfs-utils, samba , gawk, gnugrep, gnused, systemd , smartmontools, enableMail ? false , sysstat, pkg-config @@ -55,6 +55,7 @@ let # And if it's enabled by default, only change that if we explicitly disable python to remove python from the closure nfs-utils.override (old: { enablePython = old.enablePython or true && enablePython; }) }/bin/exportfs" + substituteInPlace ./lib/libshare/smb.h --replace "/usr/bin/net" "${samba}/bin/net" substituteInPlace ./config/user-systemd.m4 --replace "/usr/lib/modules-load.d" "$out/etc/modules-load.d" substituteInPlace ./config/zfs-build.m4 --replace "\$sysconfdir/init.d" "$out/etc/init.d" \ --replace "/etc/default" "$out/etc/default" @@ -179,6 +180,7 @@ let snapshotting, cloning, block devices, deduplication, and more. ''; homepage = "https://github.com/openzfs/zfs"; + changelog = "https://github.com/openzfs/zfs/releases/tag/zfs-${version}"; license = licenses.cddl; platforms = platforms.linux; maintainers = with maintainers; [ hmenke jcumming jonringer wizeman fpletz globin mic92 ]; @@ -193,12 +195,12 @@ in { # to be adapted zfsStable = common { # check the release notes for compatible kernels - kernelCompatible = kernel.kernelAtLeast "3.10" && kernel.kernelOlder "5.12"; + kernelCompatible = kernel.kernelAtLeast "3.10" && kernel.kernelOlder "5.13"; # this package should point to the latest release. - version = "2.0.4"; + version = "2.0.5"; - sha256 = "sha256-ySTt0K3Lc0Le35XTwjiM5l+nIf9co7wBn+Oma1r8YHo="; + sha256 = "0n0d8ab7ibxxa8znfsprh7jxwgighx5g291v7hi8272vfjrmk1mj"; }; zfsUnstable = common { @@ -206,9 +208,9 @@ in { kernelCompatible = kernel.kernelAtLeast "3.10" && kernel.kernelOlder "5.13"; # this package should point to a version / git revision compatible with the latest kernel release - version = "2.1.0-rc6"; + version = "2.1.0-rc7"; - sha256 = "0q3vl9rid6a84pb85v38hnf17vws65jjb4slw8bhm8dq8fna2a86"; + sha256 = "11dvz8r5l7cbhbx2j02y6335i2vibh29dqrqk4kmw4lf87g1isni"; isUnstable = true; }; diff --git a/third_party/nixpkgs/pkgs/pkgs-lib/formats.nix b/third_party/nixpkgs/pkgs/pkgs-lib/formats.nix index 4b6982f387..4d53956646 100644 --- a/third_party/nixpkgs/pkgs/pkgs-lib/formats.nix +++ b/third_party/nixpkgs/pkgs/pkgs-lib/formats.nix @@ -30,6 +30,7 @@ rec { int float str + path (attrsOf valueType) (listOf valueType) ]) // { @@ -112,6 +113,7 @@ rec { int float str + path (attrsOf valueType) (listOf valueType) ] // { diff --git a/third_party/nixpkgs/pkgs/pkgs-lib/tests/formats.nix b/third_party/nixpkgs/pkgs/pkgs-lib/tests/formats.nix index 2c117e29e9..679fde0152 100644 --- a/third_party/nixpkgs/pkgs/pkgs-lib/tests/formats.nix +++ b/third_party/nixpkgs/pkgs/pkgs-lib/tests/formats.nix @@ -38,6 +38,7 @@ in runBuildTests { str = "foo"; attrs.foo = null; list = [ null null ]; + path = ./formats.nix; }; expected = '' { @@ -52,6 +53,7 @@ in runBuildTests { null ], "null": null, + "path": "${./formats.nix}", "str": "foo", "true": true } @@ -67,6 +69,7 @@ in runBuildTests { str = "foo"; attrs.foo = null; list = [ null null ]; + path = ./formats.nix; }; expected = '' { @@ -80,6 +83,7 @@ in runBuildTests { null ], "null": null, + "path": "${./formats.nix}", "str": "foo", "true": true } diff --git a/third_party/nixpkgs/pkgs/servers/adguardhome/default.nix b/third_party/nixpkgs/pkgs/servers/adguardhome/default.nix index 87de7589ae..f9f164dd76 100644 --- a/third_party/nixpkgs/pkgs/servers/adguardhome/default.nix +++ b/third_party/nixpkgs/pkgs/servers/adguardhome/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "adguardhome"; - version = "0.105.2"; + version = "0.106.3"; src = fetchurl { url = "https://github.com/AdguardTeam/AdGuardHome/releases/download/v${version}/AdGuardHome_linux_amd64.tar.gz"; - sha256 = "1gpaqyczidsy7h05g318zc83swvwninidddlmlq3hgs8s7ibk2cb"; + sha256 = "11p081dqilga61zfziw5w37k6v2r84qynhz2hr4gk8367jck54x8"; }; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/servers/althttpd/default.nix b/third_party/nixpkgs/pkgs/servers/althttpd/default.nix new file mode 100644 index 0000000000..dfb073aa11 --- /dev/null +++ b/third_party/nixpkgs/pkgs/servers/althttpd/default.nix @@ -0,0 +1,24 @@ +{ lib, stdenv, fetchfossil }: + +stdenv.mkDerivation rec { + pname = "althttpd"; + version = "unstable-2021-05-07"; + + src = fetchfossil { + url = "https://sqlite.org/althttpd/"; + rev = "2c5e3f9f7051a578"; + sha256 = "sha256-+RuogtQAc+zjCWTOiOunu1pXf3LxfdWYQX+24ysJ7uY="; + }; + + installPhase = '' + install -Dm755 -t $out/bin althttpd + ''; + + meta = with lib; { + description = "The Althttpd webserver"; + homepage = "https://sqlite.org/althttpd/"; + license = licenses.publicDomain; + maintainers = with maintainers; [ siraben ]; + platforms = platforms.all; + }; +} diff --git a/third_party/nixpkgs/pkgs/servers/calibre-web/default.nix b/third_party/nixpkgs/pkgs/servers/calibre-web/default.nix index 240aae229d..ef322524ca 100644 --- a/third_party/nixpkgs/pkgs/servers/calibre-web/default.nix +++ b/third_party/nixpkgs/pkgs/servers/calibre-web/default.nix @@ -7,22 +7,20 @@ python3.pkgs.buildPythonApplication rec { pname = "calibre-web"; - version = "0.6.11"; + version = "0.6.12"; src = fetchFromGitHub { owner = "janeczku"; repo = "calibre-web"; rev = version; - sha256 = "10sjllhhcamswpa1wlim4mbm2zl4g804bwly5p4nmklg7n1v226g"; + sha256 = "sha256-IgS281qDxG302UznC63nZH8/ty4fgFtn+lLYdakGA4w="; }; prePatch = '' substituteInPlace setup.cfg \ - --replace "singledispatch>=3.4.0.0,<3.5.0.0" "" \ --replace "requests>=2.11.1,<2.25.0" "requests>=2.11.1,<2.26.0" \ - --replace "unidecode>=0.04.19,<1.2.0" "unidecode>=0.04.19" \ --replace "cps = calibreweb:main" "calibre-web = calibreweb:main" \ - --replace "Babel>=1.3, <2.9" "Babel>=1.3, <=2.9" + --replace "PyPDF3>=1.0.0,<1.0.4" "PyPDF3>=1.0.0" ''; patches = [ @@ -54,7 +52,7 @@ python3.pkgs.buildPythonApplication rec { flask_login flask_principal iso-639 - pypdf2 + pypdf3 requests sqlalchemy tornado diff --git a/third_party/nixpkgs/pkgs/servers/consul/default.nix b/third_party/nixpkgs/pkgs/servers/consul/default.nix index 874b18ef9e..c259f962b0 100644 --- a/third_party/nixpkgs/pkgs/servers/consul/default.nix +++ b/third_party/nixpkgs/pkgs/servers/consul/default.nix @@ -2,7 +2,7 @@ buildGoModule rec { pname = "consul"; - version = "1.9.6"; + version = "1.10.0"; rev = "v${version}"; # Note: Currently only release tags are supported, because they have the Consul UI @@ -17,7 +17,7 @@ buildGoModule rec { owner = "hashicorp"; repo = pname; inherit rev; - sha256 = "sha256-SuG/Q5Tjet4etd4Qy5NBQLYEe2QO0K8QHKmgxYMl09U="; + sha256 = "sha256:0gc5shz1nbya7jdkggw2izbw1p4lwkbqgbc5ihlvnwrfdgksfqqd"; }; passthru.tests.consul = nixosTests.consul; @@ -26,7 +26,7 @@ buildGoModule rec { # has a split module structure in one repo subPackages = ["." "connect/certgen"]; - vendorSha256 = "sha256-jVhj7pzJ8kxZk3ViA9zhVqD314biih/sP0Ql1GXcoRY="; + vendorSha256 = "sha256:0sxnnzzsp58ma42ylysdgxibqf65f4f9vbf8c20r44426vg75as7"; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/servers/corosync/default.nix b/third_party/nixpkgs/pkgs/servers/corosync/default.nix index 26060150df..b4926e75b5 100644 --- a/third_party/nixpkgs/pkgs/servers/corosync/default.nix +++ b/third_party/nixpkgs/pkgs/servers/corosync/default.nix @@ -10,11 +10,11 @@ with lib; stdenv.mkDerivation rec { pname = "corosync"; - version = "3.1.3"; + version = "3.1.4"; src = fetchurl { url = "http://build.clusterlabs.org/corosync/releases/${pname}-${version}.tar.gz"; - sha256 = "sha256-UlwF1DmWh52yJ4c9SbpaoVaV/L65r4dQ238M3/+Esps="; + sha256 = "sha256-sxoYlAi5RJCQcg0bSqO23t9nTkuuzOeLWPa/dLZZzuo="; }; nativeBuildInputs = [ makeWrapper pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/servers/dns/knot-dns/default.nix b/third_party/nixpkgs/pkgs/servers/dns/knot-dns/default.nix index 11adceb0f7..d052ddb7b7 100644 --- a/third_party/nixpkgs/pkgs/servers/dns/knot-dns/default.nix +++ b/third_party/nixpkgs/pkgs/servers/dns/knot-dns/default.nix @@ -1,17 +1,17 @@ { lib, stdenv, fetchurl, pkg-config, gnutls, liburcu, lmdb, libcap_ng, libidn2, libunistring , systemd, nettle, libedit, zlib, libiconv, libintl, libmaxminddb, libbpf, nghttp2 -, autoreconfHook +, autoreconfHook, nixosTests }: let inherit (lib) optional optionals; in stdenv.mkDerivation rec { pname = "knot-dns"; - version = "3.0.6"; + version = "3.0.7"; src = fetchurl { url = "https://secure.nic.cz/files/knot-dns/knot-${version}.tar.xz"; - sha256 = "63756ac5a00c3e4a066ed231a287faef5963a9183d77326e30bf0644cdf74f86"; + sha256 = "2bad8be0be95c8f54a26d1e16299e65f31ae1b34bd6ad3819aa50e7b40521484"; }; outputs = [ "bin" "out" "dev" ]; @@ -50,12 +50,15 @@ stdenv.mkDerivation rec { CFLAGS = [ "-O2" "-DNDEBUG" ]; doCheck = true; + checkFlags = "V=1"; # verbose output in case some test fails doInstallCheck = true; postInstall = '' rm -r "$out"/lib/*.la ''; + passthru.tests = { inherit (nixosTests) knot; }; + meta = with lib; { description = "Authoritative-only DNS server from .cz domain registry"; homepage = "https://knot-dns.cz"; diff --git a/third_party/nixpkgs/pkgs/servers/dns/knot-resolver/default.nix b/third_party/nixpkgs/pkgs/servers/dns/knot-resolver/default.nix index 791de67e52..b0f9dfd6c9 100644 --- a/third_party/nixpkgs/pkgs/servers/dns/knot-resolver/default.nix +++ b/third_party/nixpkgs/pkgs/servers/dns/knot-resolver/default.nix @@ -79,7 +79,8 @@ unwrapped = stdenv.mkDerivation rec { rm -r "$out"/lib/sysusers.d/ # ATM more likely to harm than help ''; - doInstallCheck = with stdenv; hostPlatform == buildPlatform; + doInstallCheck = with stdenv; hostPlatform == buildPlatform + && !(isDarwin && isAarch64); # avoid luarocks, as it's broken ATM on the platform installCheckInputs = [ cmocka which cacert lua.cqueues lua.basexx lua.http ]; installCheckPhase = '' meson test --print-errorlogs diff --git a/third_party/nixpkgs/pkgs/servers/dns/pdns-recursor/default.nix b/third_party/nixpkgs/pkgs/servers/dns/pdns-recursor/default.nix index ee3d8aafa1..70e7e758bb 100644 --- a/third_party/nixpkgs/pkgs/servers/dns/pdns-recursor/default.nix +++ b/third_party/nixpkgs/pkgs/servers/dns/pdns-recursor/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { pname = "pdns-recursor"; - version = "4.5.1"; + version = "4.5.2"; src = fetchurl { url = "https://downloads.powerdns.com/releases/pdns-recursor-${version}.tar.bz2"; - sha256 = "0yaf25jg3gfsi9c9rnxz1ywy3b563plv33aibxrq79iqwk8a289p"; + sha256 = "1101izvyknxqhzz987j3acsa221ymgrnmyciaz8v7jziai9ksa5i"; }; nativeBuildInputs = [ pkg-config ]; @@ -36,7 +36,7 @@ stdenv.mkDerivation rec { badPlatforms = [ "i686-linux" # a 64-bit time_t is needed ]; - license = licenses.gpl2; + license = licenses.gpl2Only; maintainers = with maintainers; [ rnhmjoj ]; }; } diff --git a/third_party/nixpkgs/pkgs/servers/fileshare/default.nix b/third_party/nixpkgs/pkgs/servers/fileshare/default.nix index 88c14a220d..7141efef30 100644 --- a/third_party/nixpkgs/pkgs/servers/fileshare/default.nix +++ b/third_party/nixpkgs/pkgs/servers/fileshare/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchgit, pkg-config, git, libmicrohttpd_0_9_70 }: +{ stdenv, lib, fetchgit, pkg-config, git, libmicrohttpd }: stdenv.mkDerivation rec { pname = "fileshare"; @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { ''; nativeBuildInputs = [ pkg-config git ]; - buildInputs = [ libmicrohttpd_0_9_70 ]; + buildInputs = [ libmicrohttpd ]; makeFlags = [ "BUILD=release" ]; diff --git a/third_party/nixpkgs/pkgs/servers/ftp/vsftpd/default.nix b/third_party/nixpkgs/pkgs/servers/ftp/vsftpd/default.nix index b87d11809b..a477551df3 100644 --- a/third_party/nixpkgs/pkgs/servers/ftp/vsftpd/default.nix +++ b/third_party/nixpkgs/pkgs/servers/ftp/vsftpd/default.nix @@ -18,17 +18,18 @@ stdenv.mkDerivation rec { substituteInPlace Makefile \ --replace -dirafter "" \ --replace /usr $out \ - --replace /etc $out/etc + --replace /etc $out/etc \ + --replace "-Werror" "" + mkdir -p $out/sbin $out/man/man{5,8} ''; - NIX_LDFLAGS = "-lcrypt -lssl -lcrypto -lpam -lcap"; + makeFlags = [ + "CC=${stdenv.cc.targetPrefix}cc" + ]; - # On gcc9, this would produce - # error: '-Werror=enum-conversion': no option -Wenum-conversion - NIX_CFLAGS_COMPILE = lib.optionalString (lib.versionAtLeast stdenv.cc.version "10") - "-Wno-error=enum-conversion"; + NIX_LDFLAGS = "-lcrypt -lssl -lcrypto -lpam -lcap"; enableParallelBuilding = true; diff --git a/third_party/nixpkgs/pkgs/servers/gemini/agate/default.nix b/third_party/nixpkgs/pkgs/servers/gemini/agate/default.nix index 5585926da5..faaef53f16 100644 --- a/third_party/nixpkgs/pkgs/servers/gemini/agate/default.nix +++ b/third_party/nixpkgs/pkgs/servers/gemini/agate/default.nix @@ -2,26 +2,19 @@ rustPlatform.buildRustPackage rec { pname = "agate"; - version = "3.0.3"; + version = "3.1.0"; src = fetchFromGitHub { owner = "mbrubeck"; repo = pname; rev = "v${version}"; - sha256 = "sha256-0sh9OuX52kvhTt681uZesOUttrxH8ZMxn6mTILQDQuU="; + sha256 = "sha256-miIMz4Lk4R5So96Ceqe1Fl5ozpf47qWq0GgtKFDDCCA="; }; - cargoSha256 = "sha256-JBmSa2sc/eor0bCcIMhGGLmcJN+wCloP0Ao9DBybQbc="; + cargoSha256 = "sha256-NZpqCl37dZUvXmn4Q1Pvbz3LSxk1s0s5x1CBO0POA/4="; buildInputs = lib.optionals stdenv.isDarwin [ libiconv Security ]; - checkFlags = [ - # Username and Password use the same ports and causes collision - # https://github.com/mbrubeck/agate/issues/50 - "--skip username" - "--skip password" - ]; - doInstallCheck = true; installCheckPhase = '' runHook preInstallCheck diff --git a/third_party/nixpkgs/pkgs/servers/gonic/default.nix b/third_party/nixpkgs/pkgs/servers/gonic/default.nix index 4be2bdfb5b..1ff50079eb 100644 --- a/third_party/nixpkgs/pkgs/servers/gonic/default.nix +++ b/third_party/nixpkgs/pkgs/servers/gonic/default.nix @@ -1,5 +1,5 @@ { lib, buildGoModule, fetchFromGitHub -, pkg-config, taglib, alsaLib +, pkg-config, taglib, alsa-lib , zlib # Disable on-the-fly transcoding, @@ -21,7 +21,7 @@ buildGoModule rec { }; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ taglib alsaLib zlib ]; + buildInputs = [ taglib alsa-lib zlib ]; vendorSha256 = "0inxlqxnkglz4j14jav8080718a80nqdcl866lkql8r6zcxb4fm9"; # TODO(Profpatsch): write a test for transcoding support, diff --git a/third_party/nixpkgs/pkgs/servers/home-assistant/appdaemon.nix b/third_party/nixpkgs/pkgs/servers/home-assistant/appdaemon.nix index 7b100b692a..7af675de41 100644 --- a/third_party/nixpkgs/pkgs/servers/home-assistant/appdaemon.nix +++ b/third_party/nixpkgs/pkgs/servers/home-assistant/appdaemon.nix @@ -51,7 +51,7 @@ python3.pkgs.buildPythonApplication rec { sockjs uvloop voluptuous - websocket_client + websocket-client yarl ]; diff --git a/third_party/nixpkgs/pkgs/servers/home-assistant/cli.nix b/third_party/nixpkgs/pkgs/servers/home-assistant/cli.nix index 9b678a5071..baa418776c 100644 --- a/third_party/nixpkgs/pkgs/servers/home-assistant/cli.nix +++ b/third_party/nixpkgs/pkgs/servers/home-assistant/cli.nix @@ -4,11 +4,11 @@ python3.pkgs.buildPythonApplication rec { pname = "homeassistant-cli"; - version = "0.9.3"; + version = "0.9.4"; src = python3.pkgs.fetchPypi { inherit pname version; - sha256 = "18h6bc99skzb0a1pffb6lr2z04928srrcz1w2zy66bndasic5yfs"; + sha256 = "03kiyqpp3zf8rg30d12h4fapihh0rqwpv5p8jfxb3iq0chfmjx2f"; }; postPatch = '' @@ -30,11 +30,13 @@ python3.pkgs.buildPythonApplication rec { tabulate ]; - postInstall = '' - mkdir -p "$out/share/bash-completion/completions" "$out/share/zsh/site-functions" - $out/bin/hass-cli completion bash > "$out/share/bash-completion/completions/hass-cli" - $out/bin/hass-cli completion zsh > "$out/share/zsh/site-functions/_hass-cli" - ''; + # Completion needs to be ported to work with click > 8.0 + # https://github.com/home-assistant-ecosystem/home-assistant-cli/issues/367 + #postInstall = '' + # mkdir -p "$out/share/bash-completion/completions" "$out/share/zsh/site-functions" + # $out/bin/hass-cli completion bash > "$out/share/bash-completion/completions/hass-cli" + # $out/bin/hass-cli completion zsh > "$out/share/zsh/site-functions/_hass-cli" + #''; checkInputs = with python3.pkgs; [ pytestCheckHook @@ -43,7 +45,7 @@ python3.pkgs.buildPythonApplication rec { meta = with lib; { description = "Command-line tool for Home Assistant"; - homepage = "https://github.com/home-assistant/home-assistant-cli"; + homepage = "https://github.com/home-assistant-ecosystem/home-assistant-cli"; changelog = "https://github.com/home-assistant-ecosystem/home-assistant-cli/releases/tag/${version}"; license = licenses.asl20; maintainers = teams.home-assistant.members; diff --git a/third_party/nixpkgs/pkgs/servers/home-assistant/component-packages.nix b/third_party/nixpkgs/pkgs/servers/home-assistant/component-packages.nix index 98e0781186..f4f5991171 100644 --- a/third_party/nixpkgs/pkgs/servers/home-assistant/component-packages.nix +++ b/third_party/nixpkgs/pkgs/servers/home-assistant/component-packages.nix @@ -2,7 +2,7 @@ # Do not edit! { - version = "2021.5.5"; + version = "2021.6.6"; components = { "abode" = ps: with ps; [ abodepy ]; "accuweather" = ps: with ps; [ accuweather ]; @@ -12,20 +12,20 @@ "adguard" = ps: with ps; [ adguardhome ]; "ads" = ps: with ps; [ pyads ]; "advantage_air" = ps: with ps; [ advantage-air ]; - "aemet" = ps: with ps; [ ]; # missing inputs: AEMET-OpenData + "aemet" = ps: with ps; [ aemet-opendata ]; "aftership" = ps: with ps; [ pyaftership ]; "agent_dvr" = ps: with ps; [ agent-py ]; "air_quality" = ps: with ps; [ ]; "airly" = ps: with ps; [ airly ]; "airnow" = ps: with ps; [ pyairnow ]; "airvisual" = ps: with ps; [ pyairvisual ]; - "aladdin_connect" = ps: with ps; [ ]; # missing inputs: aladdin_connect + "aladdin_connect" = ps: with ps; [ aladdin-connect ]; "alarm_control_panel" = ps: with ps; [ ]; "alarmdecoder" = ps: with ps; [ adext ]; "alert" = ps: with ps; [ ]; "alexa" = ps: with ps; [ aiohttp-cors ]; "almond" = ps: with ps; [ aiohttp-cors pyalmond ]; - "alpha_vantage" = ps: with ps; [ ]; # missing inputs: alpha_vantage + "alpha_vantage" = ps: with ps; [ alpha-vantage ]; "amazon_polly" = ps: with ps; [ boto3 ]; "ambiclimate" = ps: with ps; [ aiohttp-cors ambiclimate ]; "ambient_station" = ps: with ps; [ aioambient ]; @@ -40,12 +40,12 @@ "apcupsd" = ps: with ps; [ ]; # missing inputs: apcaccess "api" = ps: with ps; [ aiohttp-cors ]; "apns" = ps: with ps; [ ]; # missing inputs: apns2 - "apple_tv" = ps: with ps; [ aiohttp-cors netdisco pyatv pyroute2 zeroconf ]; + "apple_tv" = ps: with ps; [ aiohttp-cors ifaddr netdisco pyatv zeroconf ]; "apprise" = ps: with ps; [ apprise ]; - "aprs" = ps: with ps; [ geopy ]; # missing inputs: aprslib + "aprs" = ps: with ps; [ aprslib geopy ]; "aqualogic" = ps: with ps; [ aqualogic ]; "aquostv" = ps: with ps; [ ]; # missing inputs: sharp_aquos_rc - "arcam_fmj" = ps: with ps; [ ]; # missing inputs: arcam-fmj + "arcam_fmj" = ps: with ps; [ arcam-fmj ]; "arduino" = ps: with ps; [ ]; # missing inputs: PyMata "arest" = ps: with ps; [ ]; "arlo" = ps: with ps; [ ha-ffmpeg pyarlo ]; @@ -55,7 +55,7 @@ "asterisk_cdr" = ps: with ps; [ ]; # missing inputs: asterisk_mbox "asterisk_mbox" = ps: with ps; [ ]; # missing inputs: asterisk_mbox "asuswrt" = ps: with ps; [ aioasuswrt ]; - "atag" = ps: with ps; [ ]; # missing inputs: pyatag + "atag" = ps: with ps; [ pyatag ]; "aten_pe" = ps: with ps; [ atenpdu ]; "atome" = ps: with ps; [ ]; # missing inputs: pyatome "august" = ps: with ps; [ yalexs ]; @@ -68,8 +68,8 @@ "awair" = ps: with ps; [ python-awair ]; "aws" = ps: with ps; [ aiobotocore ]; "axis" = ps: with ps; [ aiohttp-cors axis paho-mqtt ]; - "azure_devops" = ps: with ps; [ ]; # missing inputs: aioazuredevops - "azure_event_hub" = ps: with ps; [ ]; # missing inputs: azure-eventhub + "azure_devops" = ps: with ps; [ aioazuredevops ]; + "azure_event_hub" = ps: with ps; [ azure-eventhub ]; "azure_service_bus" = ps: with ps; [ azure-servicebus ]; "baidu" = ps: with ps; [ ]; # missing inputs: baidu-aip "bayesian" = ps: with ps; [ ]; @@ -79,10 +79,10 @@ "bh1750" = ps: with ps; [ smbus-cffi ]; # missing inputs: i2csense "binary_sensor" = ps: with ps; [ ]; "bitcoin" = ps: with ps; [ blockchain ]; - "bizkaibus" = ps: with ps; [ ]; # missing inputs: bizkaibus + "bizkaibus" = ps: with ps; [ bizkaibus ]; "blackbird" = ps: with ps; [ pyblackbird ]; - "blebox" = ps: with ps; [ ]; # missing inputs: blebox_uniapi - "blink" = ps: with ps; [ ]; # missing inputs: blinkpy + "blebox" = ps: with ps; [ blebox-uniapi ]; + "blink" = ps: with ps; [ blinkpy ]; "blinksticklight" = ps: with ps; [ BlinkStick ]; "blinkt" = ps: with ps; [ ]; # missing inputs: blinkt "blockchain" = ps: with ps; [ ]; # missing inputs: python-blockchain-api @@ -94,8 +94,9 @@ "bme280" = ps: with ps; [ smbus-cffi ]; # missing inputs: i2csense "bme680" = ps: with ps; [ bme680 smbus-cffi ]; "bmp280" = ps: with ps; [ ]; # missing inputs: RPi.GPIO adafruit-circuitpython-bmp280 - "bmw_connected_drive" = ps: with ps; [ ]; # missing inputs: bimmer_connected - "bond" = ps: with ps; [ ]; # missing inputs: bond-api + "bmw_connected_drive" = ps: with ps; [ bimmer-connected ]; + "bond" = ps: with ps; [ bond-api ]; + "bosch_shc" = ps: with ps; [ aiohttp-cors boschshcpy ifaddr zeroconf ]; "braviatv" = ps: with ps; [ bravia-tv ]; "broadlink" = ps: with ps; [ broadlink ]; "brother" = ps: with ps; [ brother ]; @@ -105,12 +106,12 @@ "bsblan" = ps: with ps; [ bsblan ]; "bt_home_hub_5" = ps: with ps; [ ]; # missing inputs: bthomehub5-devicelist "bt_smarthub" = ps: with ps; [ ]; # missing inputs: btsmarthub_devicelist - "buienradar" = ps: with ps; [ ]; # missing inputs: buienradar + "buienradar" = ps: with ps; [ buienradar ]; "caldav" = ps: with ps; [ caldav ]; "calendar" = ps: with ps; [ aiohttp-cors ]; "camera" = ps: with ps; [ aiohttp-cors ]; "canary" = ps: with ps; [ ha-ffmpeg py-canary ]; - "cast" = ps: with ps; [ aiohttp-cors hass-nabucasa mutagen plexapi plexauth plexwebsocket PyChromecast pyroute2 zeroconf ]; + "cast" = ps: with ps; [ aiohttp-cors hass-nabucasa ifaddr mutagen plexapi plexauth plexwebsocket PyChromecast zeroconf ]; "cert_expiry" = ps: with ps; [ ]; "channels" = ps: with ps; [ pychannels ]; "circuit" = ps: with ps; [ ]; # missing inputs: circuit-webhook @@ -129,7 +130,7 @@ "cmus" = ps: with ps; [ ]; # missing inputs: pycmus "co2signal" = ps: with ps; [ ]; # missing inputs: co2signal "coinbase" = ps: with ps; [ ]; # missing inputs: coinbase - "color_extractor" = ps: with ps; [ ]; # missing inputs: colorthief + "color_extractor" = ps: with ps; [ colorthief ]; "comed_hourly_pricing" = ps: with ps; [ ]; "comfoconnect" = ps: with ps; [ pycomfoconnect ]; "command_line" = ps: with ps; [ ]; @@ -137,9 +138,9 @@ "concord232" = ps: with ps; [ ]; # missing inputs: concord232 "config" = ps: with ps; [ aiohttp-cors ]; "configurator" = ps: with ps; [ ]; - "control4" = ps: with ps; [ ]; # missing inputs: pyControl4 + "control4" = ps: with ps; [ pycontrol4 ]; "conversation" = ps: with ps; [ aiohttp-cors ]; - "coolmaster" = ps: with ps; [ ]; # missing inputs: pycoolmasternet-async + "coolmaster" = ps: with ps; [ pycoolmasternet-async ]; "coronavirus" = ps: with ps; [ coronavirus ]; "counter" = ps: with ps; [ ]; "cover" = ps: with ps; [ ]; @@ -156,7 +157,7 @@ "deconz" = ps: with ps; [ pydeconz ]; "decora" = ps: with ps; [ bluepy ]; # missing inputs: decora "decora_wifi" = ps: with ps; [ ]; # missing inputs: decora_wifi - "default_config" = ps: with ps; [ pynacl aiodiscover aiohttp-cors async-upnp-client defusedxml distro emoji hass-nabucasa netdisco pillow pyroute2 scapy sqlalchemy zeroconf ]; + "default_config" = ps: with ps; [ pynacl aiodiscover aiohttp-cors async-upnp-client defusedxml distro emoji hass-nabucasa home-assistant-frontend ifaddr netdisco pillow scapy sqlalchemy zeroconf ]; "delijn" = ps: with ps; [ pydelijn ]; "deluge" = ps: with ps; [ deluge-client ]; "demo" = ps: with ps; [ aiohttp-cors ]; @@ -167,17 +168,17 @@ "device_automation" = ps: with ps; [ ]; "device_sun_light_trigger" = ps: with ps; [ aiohttp-cors pillow ]; "device_tracker" = ps: with ps; [ ]; - "devolo_home_control" = ps: with ps; [ aiohttp-cors devolo-home-control-api pyroute2 zeroconf ]; + "devolo_home_control" = ps: with ps; [ aiohttp-cors devolo-home-control-api ifaddr zeroconf ]; "dexcom" = ps: with ps; [ pydexcom ]; "dhcp" = ps: with ps; [ aiodiscover scapy ]; "dht" = ps: with ps; [ ]; # missing inputs: adafruit-circuitpython-dht "dialogflow" = ps: with ps; [ aiohttp-cors ]; "digital_ocean" = ps: with ps; [ digital-ocean ]; "digitalloggers" = ps: with ps; [ ]; # missing inputs: dlipower - "directv" = ps: with ps; [ ]; # missing inputs: directv + "directv" = ps: with ps; [ directv ]; "discogs" = ps: with ps; [ discogs_client ]; "discord" = ps: with ps; [ discordpy ]; - "discovery" = ps: with ps; [ aiohttp-cors netdisco pyroute2 zeroconf ]; + "discovery" = ps: with ps; [ aiohttp-cors ifaddr netdisco zeroconf ]; "dlib_face_detect" = ps: with ps; [ face_recognition ]; "dlib_face_identify" = ps: with ps; [ face_recognition ]; "dlink" = ps: with ps; [ ]; # missing inputs: pyW215 @@ -185,7 +186,7 @@ "dnsip" = ps: with ps; [ aiodns ]; "dominos" = ps: with ps; [ aiohttp-cors ]; # missing inputs: pizzapi "doods" = ps: with ps; [ pillow ]; # missing inputs: pydoods - "doorbird" = ps: with ps; [ aiohttp-cors ]; # missing inputs: doorbirdpy + "doorbird" = ps: with ps; [ aiohttp-cors doorbirdpy ]; "dovado" = ps: with ps; [ ]; # missing inputs: dovado "downloader" = ps: with ps; [ ]; "dsmr" = ps: with ps; [ dsmr-parser ]; @@ -193,48 +194,48 @@ "dte_energy_bridge" = ps: with ps; [ ]; "dublin_bus_transport" = ps: with ps; [ ]; "duckdns" = ps: with ps; [ ]; - "dunehd" = ps: with ps; [ ]; # missing inputs: pdunehd + "dunehd" = ps: with ps; [ pdunehd ]; "dwd_weather_warnings" = ps: with ps; [ dwdwfsapi ]; "dweet" = ps: with ps; [ ]; # missing inputs: dweepy "dynalite" = ps: with ps; [ ]; # missing inputs: dynalite_devices - "dyson" = ps: with ps; [ aiohttp-cors libpurecool pyroute2 zeroconf ]; + "dyson" = ps: with ps; [ aiohttp-cors ifaddr libpurecool zeroconf ]; "eafm" = ps: with ps; [ aioeafm ]; "ebox" = ps: with ps; [ ]; # missing inputs: pyebox "ebusd" = ps: with ps; [ ]; # missing inputs: ebusdpy - "ecoal_boiler" = ps: with ps; [ ]; # missing inputs: ecoaliface - "ecobee" = ps: with ps; [ ]; # missing inputs: python-ecobee-api + "ecoal_boiler" = ps: with ps; [ ecoaliface ]; + "ecobee" = ps: with ps; [ python-ecobee-api ]; "econet" = ps: with ps; [ pyeconet ]; "ecovacs" = ps: with ps; [ ]; # missing inputs: sucks "eddystone_temperature" = ps: with ps; [ construct ]; # missing inputs: beacontools[scan] "edimax" = ps: with ps; [ pyedimax ]; - "edl21" = ps: with ps; [ ]; # missing inputs: pysml - "ee_brightbox" = ps: with ps; [ ]; # missing inputs: eebrightbox + "edl21" = ps: with ps; [ pysml ]; + "ee_brightbox" = ps: with ps; [ eebrightbox ]; "efergy" = ps: with ps; [ ]; "egardia" = ps: with ps; [ pythonegardia ]; "eight_sleep" = ps: with ps; [ pyeight ]; - "elgato" = ps: with ps; [ ]; # missing inputs: elgato + "elgato" = ps: with ps; [ elgato ]; "eliqonline" = ps: with ps; [ ]; # missing inputs: eliqonline "elkm1" = ps: with ps; [ ]; # missing inputs: elkm1-lib - "elv" = ps: with ps; [ ]; # missing inputs: pypca + "elv" = ps: with ps; [ pypca ]; "emby" = ps: with ps; [ pyemby ]; "emoncms" = ps: with ps; [ ]; "emoncms_history" = ps: with ps; [ ]; "emonitor" = ps: with ps; [ aioemonitor ]; "emulated_hue" = ps: with ps; [ aiohttp-cors ]; - "emulated_kasa" = ps: with ps; [ ]; # missing inputs: sense_energy - "emulated_roku" = ps: with ps; [ ]; # missing inputs: emulated_roku + "emulated_kasa" = ps: with ps; [ sense-energy ]; + "emulated_roku" = ps: with ps; [ emulated-roku ]; "enigma2" = ps: with ps; [ openwebifpy ]; - "enocean" = ps: with ps; [ ]; # missing inputs: enocean + "enocean" = ps: with ps; [ enocean ]; "enphase_envoy" = ps: with ps; [ envoy-reader ]; - "entur_public_transport" = ps: with ps; [ ]; # missing inputs: enturclient + "entur_public_transport" = ps: with ps; [ enturclient ]; "environment_canada" = ps: with ps; [ ]; # missing inputs: env_canada "envirophat" = ps: with ps; [ smbus-cffi ]; # missing inputs: envirophat "envisalink" = ps: with ps; [ pyenvisalink ]; "ephember" = ps: with ps; [ ]; # missing inputs: pyephember - "epson" = ps: with ps; [ ]; # missing inputs: epson-projector + "epson" = ps: with ps; [ epson-projector ]; "epsonworkforce" = ps: with ps; [ ]; # missing inputs: epsonprinter "eq3btsmart" = ps: with ps; [ construct ]; # missing inputs: python-eq3bt - "esphome" = ps: with ps; [ aioesphomeapi aiohttp-cors pyroute2 zeroconf ]; + "esphome" = ps: with ps; [ aioesphomeapi aiohttp-cors ifaddr zeroconf ]; "essent" = ps: with ps; [ ]; # missing inputs: PyEssent "etherscan" = ps: with ps; [ ]; # missing inputs: python-etherscan-api "eufy" = ps: with ps; [ ]; # missing inputs: lakeside @@ -256,16 +257,16 @@ "fido" = ps: with ps; [ pyfido ]; "file" = ps: with ps; [ ]; "filesize" = ps: with ps; [ ]; - "filter" = ps: with ps; [ aiohttp-cors sqlalchemy ]; + "filter" = ps: with ps; [ sqlalchemy ]; "fints" = ps: with ps; [ fints ]; - "fireservicerota" = ps: with ps; [ ]; # missing inputs: pyfireservicerota + "fireservicerota" = ps: with ps; [ pyfireservicerota ]; "firmata" = ps: with ps; [ pymata-express ]; "fitbit" = ps: with ps; [ aiohttp-cors fitbit ]; "fixer" = ps: with ps; [ fixerio ]; "fleetgo" = ps: with ps; [ ]; # missing inputs: ritassist "flexit" = ps: with ps; [ pymodbus ]; # missing inputs: pyflexit - "flic" = ps: with ps; [ ]; # missing inputs: pyflic-homeassistant - "flick_electric" = ps: with ps; [ ]; # missing inputs: PyFlick + "flic" = ps: with ps; [ pyflic ]; + "flick_electric" = ps: with ps; [ pyflick ]; "flo" = ps: with ps; [ aioflo ]; "flock" = ps: with ps; [ ]; "flume" = ps: with ps; [ pyflume ]; @@ -274,44 +275,45 @@ "flux_led" = ps: with ps; [ flux-led ]; "folder" = ps: with ps; [ ]; "folder_watcher" = ps: with ps; [ watchdog ]; - "foobot" = ps: with ps; [ ]; # missing inputs: foobot_async + "foobot" = ps: with ps; [ foobot-async ]; "forked_daapd" = ps: with ps; [ ]; # missing inputs: pyforked-daapd pylibrespot-java "fortios" = ps: with ps; [ fortiosapi ]; - "foscam" = ps: with ps; [ ]; # missing inputs: libpyfoscam + "foscam" = ps: with ps; [ libpyfoscam ]; "foursquare" = ps: with ps; [ aiohttp-cors ]; "free_mobile" = ps: with ps; [ ]; # missing inputs: freesms "freebox" = ps: with ps; [ freebox-api ]; "freedns" = ps: with ps; [ ]; - "fritz" = ps: with ps; [ fritzconnection xmltodict ]; + "fritz" = ps: with ps; [ fritzconnection ]; "fritzbox" = ps: with ps; [ pyfritzhome ]; "fritzbox_callmonitor" = ps: with ps; [ fritzconnection ]; "fritzbox_netmonitor" = ps: with ps; [ fritzconnection ]; "fronius" = ps: with ps; [ ]; # missing inputs: pyfronius - "frontend" = ps: with ps; [ aiohttp-cors pillow ]; + "frontend" = ps: with ps; [ aiohttp-cors home-assistant-frontend pillow ]; "frontier_silicon" = ps: with ps; [ ]; # missing inputs: afsapi "futurenow" = ps: with ps; [ pyfnip ]; "garadget" = ps: with ps; [ ]; - "garmin_connect" = ps: with ps; [ ]; # missing inputs: garminconnect + "garages_amsterdam" = ps: with ps; [ garages-amsterdam ]; + "garmin_connect" = ps: with ps; [ garminconnect-ha ]; "gc100" = ps: with ps; [ ]; # missing inputs: python-gc100 - "gdacs" = ps: with ps; [ ]; # missing inputs: aio_georss_gdacs + "gdacs" = ps: with ps; [ aio-georss-gdacs ]; "generic" = ps: with ps; [ ]; - "generic_thermostat" = ps: with ps; [ ]; + "generic_thermostat" = ps: with ps; [ sqlalchemy ]; "geniushub" = ps: with ps; [ ]; # missing inputs: geniushub-client "geo_json_events" = ps: with ps; [ geojson-client ]; "geo_location" = ps: with ps; [ ]; - "geo_rss_events" = ps: with ps; [ ]; # missing inputs: georss_generic_client + "geo_rss_events" = ps: with ps; [ georss-generic-client ]; "geofency" = ps: with ps; [ aiohttp-cors ]; - "geonetnz_quakes" = ps: with ps; [ ]; # missing inputs: aio_geojson_geonetnz_quakes - "geonetnz_volcano" = ps: with ps; [ ]; # missing inputs: aio_geojson_geonetnz_volcano - "gios" = ps: with ps; [ ]; # missing inputs: gios + "geonetnz_quakes" = ps: with ps; [ aio-geojson-geonetnz-quakes ]; + "geonetnz_volcano" = ps: with ps; [ aio-geojson-geonetnz-volcano ]; + "gios" = ps: with ps; [ gios ]; "github" = ps: with ps; [ PyGithub ]; "gitlab_ci" = ps: with ps; [ python-gitlab ]; "gitter" = ps: with ps; [ ]; # missing inputs: gitterpy "glances" = ps: with ps; [ glances-api ]; "gntp" = ps: with ps; [ gntp ]; "goalfeed" = ps: with ps; [ ]; # missing inputs: pysher - "goalzero" = ps: with ps; [ ]; # missing inputs: goalzero - "gogogate2" = ps: with ps; [ ]; # missing inputs: gogogate2-api + "goalzero" = ps: with ps; [ goalzero ]; + "gogogate2" = ps: with ps; [ ismartgate ]; "google" = ps: with ps; [ google-api-python-client httplib2 oauth2client ]; "google_assistant" = ps: with ps; [ aiohttp-cors ]; "google_cloud" = ps: with ps; [ google-cloud-texttospeech ]; @@ -321,58 +323,58 @@ "google_translate" = ps: with ps; [ gtts ]; "google_travel_time" = ps: with ps; [ googlemaps ]; "google_wifi" = ps: with ps; [ ]; - "gpmdp" = ps: with ps; [ websocket_client ]; + "gpmdp" = ps: with ps; [ websocket-client ]; "gpsd" = ps: with ps; [ gps3 ]; "gpslogger" = ps: with ps; [ aiohttp-cors ]; "graphite" = ps: with ps; [ ]; - "gree" = ps: with ps; [ ]; # missing inputs: greeclimate + "gree" = ps: with ps; [ greeclimate ]; "greeneye_monitor" = ps: with ps; [ ]; # missing inputs: greeneye_monitor "greenwave" = ps: with ps; [ ]; # missing inputs: greenwavereality "group" = ps: with ps; [ ]; - "growatt_server" = ps: with ps; [ ]; # missing inputs: growattServer + "growatt_server" = ps: with ps; [ growattserver ]; "gstreamer" = ps: with ps; [ ]; # missing inputs: gstreamer-player "gtfs" = ps: with ps; [ pygtfs ]; "guardian" = ps: with ps; [ aioguardian ]; - "habitica" = ps: with ps; [ ]; # missing inputs: habitipy - "hangouts" = ps: with ps; [ ]; # missing inputs: hangups + "habitica" = ps: with ps; [ habitipy ]; + "hangouts" = ps: with ps; [ hangups ]; "harman_kardon_avr" = ps: with ps; [ ]; # missing inputs: hkavr "harmony" = ps: with ps; [ aioharmony ]; - "hassio" = ps: with ps; [ aiohttp-cors pillow ]; + "hassio" = ps: with ps; [ aiohttp-cors home-assistant-frontend pillow ]; "haveibeenpwned" = ps: with ps; [ ]; "hddtemp" = ps: with ps; [ ]; "hdmi_cec" = ps: with ps; [ pycec ]; "heatmiser" = ps: with ps; [ ]; # missing inputs: heatmiserV3 - "heos" = ps: with ps; [ ]; # missing inputs: pyheos - "here_travel_time" = ps: with ps; [ ]; # missing inputs: herepy + "heos" = ps: with ps; [ pyheos ]; + "here_travel_time" = ps: with ps; [ herepy ]; "hikvision" = ps: with ps; [ ]; # missing inputs: pyhik "hikvisioncam" = ps: with ps; [ ]; # missing inputs: hikvision - "hisense_aehw4a1" = ps: with ps; [ ]; # missing inputs: pyaehw4a1 + "hisense_aehw4a1" = ps: with ps; [ pyaehw4a1 ]; "history" = ps: with ps; [ aiohttp-cors sqlalchemy ]; - "history_stats" = ps: with ps; [ aiohttp-cors sqlalchemy ]; + "history_stats" = ps: with ps; [ sqlalchemy ]; "hitron_coda" = ps: with ps; [ ]; - "hive" = ps: with ps; [ ]; # missing inputs: pyhiveapi - "hlk_sw16" = ps: with ps; [ ]; # missing inputs: hlk-sw16 + "hive" = ps: with ps; [ pyhiveapi ]; + "hlk_sw16" = ps: with ps; [ hlk-sw16 ]; "home_connect" = ps: with ps; [ aiohttp-cors homeconnect ]; "home_plus_control" = ps: with ps; [ aiohttp-cors homepluscontrol ]; "homeassistant" = ps: with ps; [ ]; - "homekit" = ps: with ps; [ HAP-python pyqrcode pyturbojpeg aiohttp-cors base36 fnvhash ha-ffmpeg pyroute2 zeroconf ]; - "homekit_controller" = ps: with ps; [ aiohomekit aiohttp-cors pyroute2 zeroconf ]; + "homekit" = ps: with ps; [ hap-python pyqrcode pyturbojpeg aiohttp-cors base36 fnvhash ha-ffmpeg ifaddr zeroconf ]; + "homekit_controller" = ps: with ps; [ aiohomekit aiohttp-cors ifaddr zeroconf ]; "homematic" = ps: with ps; [ pyhomematic ]; "homematicip_cloud" = ps: with ps; [ homematicip ]; "homeworks" = ps: with ps; [ ]; # missing inputs: pyhomeworks - "honeywell" = ps: with ps; [ ]; # missing inputs: somecomfort + "honeywell" = ps: with ps; [ somecomfort ]; "horizon" = ps: with ps; [ ]; # missing inputs: horimote "hp_ilo" = ps: with ps; [ python-hpilo ]; "html5" = ps: with ps; [ aiohttp-cors pywebpush ]; "http" = ps: with ps; [ aiohttp-cors ]; "htu21d" = ps: with ps; [ smbus-cffi ]; # missing inputs: i2csense - "huawei_lte" = ps: with ps; [ getmac stringcase url-normalize ]; # missing inputs: huawei-lte-api + "huawei_lte" = ps: with ps; [ getmac huawei-lte-api stringcase url-normalize ]; "huawei_router" = ps: with ps; [ ]; "hue" = ps: with ps; [ aiohue ]; - "huisbaasje" = ps: with ps; [ ]; # missing inputs: huisbaasje-client + "huisbaasje" = ps: with ps; [ huisbaasje-client ]; "humidifier" = ps: with ps; [ ]; "hunterdouglas_powerview" = ps: with ps; [ ]; # missing inputs: aiopvapi - "hvv_departures" = ps: with ps; [ ]; # missing inputs: pygti + "hvv_departures" = ps: with ps; [ pygti ]; "hydrawise" = ps: with ps; [ hydrawiser ]; "hyperion" = ps: with ps; [ hyperion-py ]; "ialarm" = ps: with ps; [ pyialarm ]; @@ -382,7 +384,7 @@ "idteck_prox" = ps: with ps; [ ]; # missing inputs: rfk101py "ifttt" = ps: with ps; [ aiohttp-cors pyfttt ]; "iglo" = ps: with ps; [ ]; # missing inputs: iglo - "ign_sismologia" = ps: with ps; [ ]; # missing inputs: georss_ign_sismologia_client + "ign_sismologia" = ps: with ps; [ georss-ign-sismologia-client ]; "ihc" = ps: with ps; [ defusedxml ]; # missing inputs: ihcsdk "image" = ps: with ps; [ aiohttp-cors pillow ]; "image_processing" = ps: with ps; [ aiohttp-cors ]; @@ -400,26 +402,26 @@ "intent" = ps: with ps; [ aiohttp-cors ]; "intent_script" = ps: with ps; [ ]; "intesishome" = ps: with ps; [ pyintesishome ]; - "ios" = ps: with ps; [ aiohttp-cors pyroute2 zeroconf ]; + "ios" = ps: with ps; [ aiohttp-cors ifaddr zeroconf ]; "iota" = ps: with ps; [ ]; # missing inputs: pyota "iperf3" = ps: with ps; [ ]; # missing inputs: iperf3 - "ipma" = ps: with ps; [ ]; # missing inputs: pyipma + "ipma" = ps: with ps; [ pyipma ]; "ipp" = ps: with ps; [ pyipp ]; "iqvia" = ps: with ps; [ numpy pyiqvia ]; "irish_rail_transport" = ps: with ps; [ ]; # missing inputs: pyirishrail "islamic_prayer_times" = ps: with ps; [ prayer-times-calculator ]; "iss" = ps: with ps; [ ]; # missing inputs: pyiss - "isy994" = ps: with ps; [ ]; # missing inputs: pyisy + "isy994" = ps: with ps; [ pyisy ]; "itach" = ps: with ps; [ ]; # missing inputs: pyitachip2ir "itunes" = ps: with ps; [ ]; - "izone" = ps: with ps; [ ]; # missing inputs: python-izone + "izone" = ps: with ps; [ python-izone ]; "jewish_calendar" = ps: with ps; [ hdate ]; "joaoapps_join" = ps: with ps; [ ]; # missing inputs: python-join-api - "juicenet" = ps: with ps; [ ]; # missing inputs: python-juicenet + "juicenet" = ps: with ps; [ python-juicenet ]; "kaiterra" = ps: with ps; [ ]; # missing inputs: kaiterra-async-client "kankun" = ps: with ps; [ ]; "keba" = ps: with ps; [ ]; # missing inputs: keba-kecontact - "keenetic_ndms2" = ps: with ps; [ ]; # missing inputs: ndms2_client + "keenetic_ndms2" = ps: with ps; [ ndms2-client ]; "kef" = ps: with ps; [ aiokef getmac ]; "keyboard" = ps: with ps; [ ]; # missing inputs: pyuserinput "keyboard_remote" = ps: with ps; [ aionotify evdev ]; @@ -428,22 +430,22 @@ "kmtronic" = ps: with ps; [ pykmtronic ]; "knx" = ps: with ps; [ xknx ]; "kodi" = ps: with ps; [ pykodi ]; - "konnected" = ps: with ps; [ aiohttp-cors ]; # missing inputs: konnected + "konnected" = ps: with ps; [ aiohttp-cors konnected ]; "kostal_plenticore" = ps: with ps; [ ]; # missing inputs: kostal_plenticore - "kulersky" = ps: with ps; [ ]; # missing inputs: pykulersky + "kraken" = ps: with ps; [ krakenex pykrakenapi ]; + "kulersky" = ps: with ps; [ pykulersky ]; "kwb" = ps: with ps; [ ]; # missing inputs: pykwb "lacrosse" = ps: with ps; [ pylacrosse ]; - "lametric" = ps: with ps; [ ]; # missing inputs: lmnotify + "lametric" = ps: with ps; [ lmnotify ]; "lannouncer" = ps: with ps; [ ]; "lastfm" = ps: with ps; [ pylast ]; "launch_library" = ps: with ps; [ ]; # missing inputs: pylaunches "lcn" = ps: with ps; [ pypck ]; - "lg_netcast" = ps: with ps; [ ]; # missing inputs: pylgnetcast-homeassistant + "lg_netcast" = ps: with ps; [ ]; # missing inputs: pylgnetcast "lg_soundbar" = ps: with ps; [ ]; # missing inputs: temescal "life360" = ps: with ps; [ ]; # missing inputs: life360 "lifx" = ps: with ps; [ aiolifx aiolifx-effects ]; "lifx_cloud" = ps: with ps; [ ]; - "lifx_legacy" = ps: with ps; [ ]; # missing inputs: liffylights "light" = ps: with ps; [ ]; "lightwave" = ps: with ps; [ ]; # missing inputs: lightwave "limitlessled" = ps: with ps; [ limitlessled ]; @@ -458,7 +460,7 @@ "local_ip" = ps: with ps; [ ]; "locative" = ps: with ps; [ aiohttp-cors ]; "lock" = ps: with ps; [ ]; - "logbook" = ps: with ps; [ aiohttp-cors pillow sqlalchemy ]; + "logbook" = ps: with ps; [ aiohttp-cors home-assistant-frontend pillow sqlalchemy ]; "logentries" = ps: with ps; [ ]; "logger" = ps: with ps; [ ]; "logi_circle" = ps: with ps; [ aiohttp-cors ha-ffmpeg ]; # missing inputs: logi_circle @@ -479,9 +481,9 @@ "mailgun" = ps: with ps; [ aiohttp-cors ]; # missing inputs: pymailgunner "manual" = ps: with ps; [ ]; "manual_mqtt" = ps: with ps; [ aiohttp-cors paho-mqtt ]; - "map" = ps: with ps; [ aiohttp-cors pillow ]; + "map" = ps: with ps; [ aiohttp-cors home-assistant-frontend pillow ]; "marytts" = ps: with ps; [ ]; # missing inputs: speak2mary - "mastodon" = ps: with ps; [ ]; # missing inputs: Mastodon.py + "mastodon" = ps: with ps; [ mastodon-py ]; "matrix" = ps: with ps; [ matrix-client ]; "maxcube" = ps: with ps; [ ]; # missing inputs: maxcube-api "mazda" = ps: with ps; [ pymazda ]; @@ -497,17 +499,18 @@ "met" = ps: with ps; [ pymetno ]; "met_eireann" = ps: with ps; [ pymeteireann ]; "meteo_france" = ps: with ps; [ ]; # missing inputs: meteofrance-api - "meteoalarm" = ps: with ps; [ ]; # missing inputs: meteoalertapi + "meteoalarm" = ps: with ps; [ meteoalertapi ]; + "meteoclimatic" = ps: with ps; [ pymeteoclimatic ]; "metoffice" = ps: with ps; [ ]; # missing inputs: datapoint "mfi" = ps: with ps; [ ]; # missing inputs: mficlient - "mhz19" = ps: with ps; [ ]; # missing inputs: pmsensor + "mhz19" = ps: with ps; [ pmsensor ]; "microsoft" = ps: with ps; [ ]; # missing inputs: pycsspeechtts "microsoft_face" = ps: with ps; [ aiohttp-cors ]; "microsoft_face_detect" = ps: with ps; [ aiohttp-cors ]; "microsoft_face_identify" = ps: with ps; [ aiohttp-cors ]; "miflora" = ps: with ps; [ bluepy ]; # missing inputs: miflora "mikrotik" = ps: with ps; [ librouteros ]; - "mill" = ps: with ps; [ ]; # missing inputs: millheater + "mill" = ps: with ps; [ millheater ]; "min_max" = ps: with ps; [ ]; "minecraft_server" = ps: with ps; [ aiodns getmac mcstatus ]; "minio" = ps: with ps; [ minio ]; @@ -533,19 +536,19 @@ "mullvad" = ps: with ps; [ mullvad-api ]; "mutesync" = ps: with ps; [ mutesync ]; "mvglive" = ps: with ps; [ PyMVGLive ]; - "my" = ps: with ps; [ aiohttp-cors pillow ]; + "my" = ps: with ps; [ aiohttp-cors home-assistant-frontend pillow ]; "mychevy" = ps: with ps; [ ]; # missing inputs: mychevy "mycroft" = ps: with ps; [ ]; # missing inputs: mycroftapi "myq" = ps: with ps; [ pymyq ]; "mysensors" = ps: with ps; [ aiohttp-cors paho-mqtt pymysensors ]; "mystrom" = ps: with ps; [ aiohttp-cors python-mystrom ]; "mythicbeastsdns" = ps: with ps; [ ]; # missing inputs: mbddns - "n26" = ps: with ps; [ ]; # missing inputs: n26 "nad" = ps: with ps; [ nad-receiver ]; + "nam" = ps: with ps; [ nettigo-air-monitor ]; "namecheapdns" = ps: with ps; [ defusedxml ]; "nanoleaf" = ps: with ps; [ pynanoleaf ]; "neato" = ps: with ps; [ aiohttp-cors pybotvac ]; - "nederlandse_spoorwegen" = ps: with ps; [ ]; # missing inputs: nsapi + "nederlandse_spoorwegen" = ps: with ps; [ nsapi ]; "nello" = ps: with ps; [ ]; # missing inputs: pynello "ness_alarm" = ps: with ps; [ ]; # missing inputs: nessclient "nest" = ps: with ps; [ aiohttp-cors ha-ffmpeg python-nest ]; # missing inputs: google-nest-sdm @@ -554,10 +557,11 @@ "netgear" = ps: with ps; [ ]; # missing inputs: pynetgear "netgear_lte" = ps: with ps; [ ]; # missing inputs: eternalegypt "netio" = ps: with ps; [ aiohttp-cors ]; # missing inputs: pynetio + "network" = ps: with ps; [ aiohttp-cors ifaddr ]; "neurio_energy" = ps: with ps; [ ]; # missing inputs: neurio "nexia" = ps: with ps; [ nexia ]; "nextbus" = ps: with ps; [ ]; # missing inputs: py_nextbusnext - "nextcloud" = ps: with ps; [ ]; # missing inputs: nextcloudmonitor + "nextcloud" = ps: with ps; [ nextcloudmonitor ]; "nfandroidtv" = ps: with ps; [ ]; "nightscout" = ps: with ps; [ ]; # missing inputs: py-nightscout "niko_home_control" = ps: with ps; [ ]; # missing inputs: niko-home-control @@ -572,7 +576,7 @@ "notify_events" = ps: with ps; [ ]; # missing inputs: notify-events "notion" = ps: with ps; [ aionotion ]; "nsw_fuel_station" = ps: with ps; [ ]; # missing inputs: nsw-fuel-api-client - "nsw_rural_fire_service_feed" = ps: with ps; [ ]; # missing inputs: aio_geojson_nsw_rfs_incidents + "nsw_rural_fire_service_feed" = ps: with ps; [ aio-geojson-nsw-rfs-incidents ]; "nuheat" = ps: with ps; [ ]; # missing inputs: nuheat "nuki" = ps: with ps; [ pynuki ]; "numato" = ps: with ps; [ ]; # missing inputs: numato-gpio @@ -583,12 +587,12 @@ "nzbget" = ps: with ps; [ ]; # missing inputs: pynzbgetapi "oasa_telematics" = ps: with ps; [ ]; # missing inputs: oasatelematics "obihai" = ps: with ps; [ pyobihai ]; - "octoprint" = ps: with ps; [ aiohttp-cors netdisco pyroute2 zeroconf ]; + "octoprint" = ps: with ps; [ aiohttp-cors ifaddr netdisco zeroconf ]; "oem" = ps: with ps; [ ]; # missing inputs: oemthermostat "ohmconnect" = ps: with ps; [ defusedxml ]; "ombi" = ps: with ps; [ ]; # missing inputs: pyombi "omnilogic" = ps: with ps; [ omnilogic ]; - "onboarding" = ps: with ps; [ aiohttp-cors pillow ]; + "onboarding" = ps: with ps; [ aiohttp-cors home-assistant-frontend pillow ]; "ondilo_ico" = ps: with ps; [ aiohttp-cors ondilo ]; "onewire" = ps: with ps; [ ]; # missing inputs: pi1wire pyownet "onkyo" = ps: with ps; [ onkyo-eiscp ]; @@ -620,8 +624,8 @@ "panasonic_bluray" = ps: with ps; [ ]; # missing inputs: panacotta "panasonic_viera" = ps: with ps; [ ]; # missing inputs: panasonic_viera "pandora" = ps: with ps; [ pexpect ]; - "panel_custom" = ps: with ps; [ aiohttp-cors pillow ]; - "panel_iframe" = ps: with ps; [ aiohttp-cors pillow ]; + "panel_custom" = ps: with ps; [ aiohttp-cors home-assistant-frontend pillow ]; + "panel_iframe" = ps: with ps; [ aiohttp-cors home-assistant-frontend pillow ]; "pcal9535a" = ps: with ps; [ ]; # missing inputs: pcal9535a "pencom" = ps: with ps; [ ]; # missing inputs: pencompy "persistent_notification" = ps: with ps; [ ]; @@ -664,7 +668,7 @@ "pyload" = ps: with ps; [ ]; "python_script" = ps: with ps; [ restrictedpython ]; "qbittorrent" = ps: with ps; [ ]; # missing inputs: python-qbittorrent - "qld_bushfire" = ps: with ps; [ ]; # missing inputs: georss_qld_bushfire_alert_client + "qld_bushfire" = ps: with ps; [ georss-qld-bushfire-alert-client ]; "qnap" = ps: with ps; [ ]; # missing inputs: qnapstats "qrcode" = ps: with ps; [ pillow ]; # missing inputs: pyzbar "quantum_gateway" = ps: with ps; [ ]; # missing inputs: quantum-gateway @@ -691,7 +695,7 @@ "repetier" = ps: with ps; [ ]; # missing inputs: pyrepetier "rest" = ps: with ps; [ jsonpath xmltodict ]; "rest_command" = ps: with ps; [ ]; - "rflink" = ps: with ps; [ ]; # missing inputs: rflink + "rflink" = ps: with ps; [ rflink ]; "rfxtrx" = ps: with ps; [ ]; # missing inputs: pyRFXtrx "ring" = ps: with ps; [ ha-ffmpeg ring-doorbell ]; "ripple" = ps: with ps; [ ]; # missing inputs: python-ripple-api @@ -701,7 +705,7 @@ "rocketchat" = ps: with ps; [ ]; # missing inputs: rocketchat-API "roku" = ps: with ps; [ rokuecp ]; "roomba" = ps: with ps; [ roombapy ]; - "roon" = ps: with ps; [ pyroon ]; + "roon" = ps: with ps; [ roonapi ]; "route53" = ps: with ps; [ boto3 ]; "rova" = ps: with ps; [ ]; # missing inputs: rova "rpi_camera" = ps: with ps; [ ]; @@ -715,10 +719,10 @@ "ruckus_unleashed" = ps: with ps; [ pyruckus ]; "russound_rio" = ps: with ps; [ ]; # missing inputs: russound_rio "russound_rnet" = ps: with ps; [ ]; # missing inputs: russound - "sabnzbd" = ps: with ps; [ aiohttp-cors netdisco pyroute2 zeroconf ]; # missing inputs: pysabnzbd - "safe_mode" = ps: with ps; [ aiohttp-cors hass-nabucasa pillow ]; + "sabnzbd" = ps: with ps; [ aiohttp-cors ifaddr netdisco zeroconf ]; # missing inputs: pysabnzbd + "safe_mode" = ps: with ps; [ aiohttp-cors hass-nabucasa home-assistant-frontend pillow ]; "saj" = ps: with ps; [ ]; # missing inputs: pysaj - "samsungtv" = ps: with ps; [ samsungctl samsungtvws ]; + "samsungtv" = ps: with ps; [ samsungctl samsungtvws wakeonlan ]; "satel_integra" = ps: with ps; [ ]; # missing inputs: satel_integra "scene" = ps: with ps; [ ]; "schluter" = ps: with ps; [ ]; # missing inputs: py-schluter @@ -729,13 +733,13 @@ "search" = ps: with ps; [ aiohttp-cors ]; "season" = ps: with ps; [ ephem ]; "sendgrid" = ps: with ps; [ sendgrid ]; - "sense" = ps: with ps; [ ]; # missing inputs: sense_energy + "sense" = ps: with ps; [ sense-energy ]; "sensehat" = ps: with ps; [ ]; # missing inputs: sense-hat "sensibo" = ps: with ps; [ ]; # missing inputs: pysensibo - "sensor" = ps: with ps; [ ]; + "sensor" = ps: with ps; [ sqlalchemy ]; "sentry" = ps: with ps; [ sentry-sdk ]; "serial" = ps: with ps; [ pyserial-asyncio ]; - "serial_pm" = ps: with ps; [ ]; # missing inputs: pmsensor + "serial_pm" = ps: with ps; [ pmsensor ]; "sesame" = ps: with ps; [ ]; # missing inputs: pysesame2 "seven_segments" = ps: with ps; [ pillow ]; "seventeentrack" = ps: with ps; [ ]; # missing inputs: py17track @@ -746,6 +750,7 @@ "shodan" = ps: with ps; [ shodan ]; "shopping_list" = ps: with ps; [ aiohttp-cors ]; "sht31" = ps: with ps; [ ]; # missing inputs: Adafruit-GPIO Adafruit-SHT31 + "sia" = ps: with ps; [ pysiaalarm ]; "sigfox" = ps: with ps; [ ]; "sighthound" = ps: with ps; [ pillow simplehound ]; "signal_messenger" = ps: with ps; [ ]; # missing inputs: pysignalclirestapi @@ -785,19 +790,18 @@ "songpal" = ps: with ps; [ ]; # missing inputs: python-songpal "sonos" = ps: with ps; [ aiohttp-cors plexapi plexauth plexwebsocket pysonos ]; "sony_projector" = ps: with ps; [ ]; # missing inputs: pysdcp - "soundtouch" = ps: with ps; [ aiohttp-cors libsoundtouch pyroute2 zeroconf ]; + "soundtouch" = ps: with ps; [ aiohttp-cors ifaddr libsoundtouch zeroconf ]; "spaceapi" = ps: with ps; [ aiohttp-cors ]; "spc" = ps: with ps; [ ]; # missing inputs: pyspcwebgw "speedtestdotnet" = ps: with ps; [ speedtest-cli ]; - "spider" = ps: with ps; [ ]; # missing inputs: spiderpy + "spider" = ps: with ps; [ spiderpy ]; "splunk" = ps: with ps; [ ]; # missing inputs: hass_splunk - "spotcrime" = ps: with ps; [ ]; # missing inputs: spotcrime "spotify" = ps: with ps; [ aiohttp-cors spotipy ]; "sql" = ps: with ps; [ sqlalchemy ]; "squeezebox" = ps: with ps; [ pysqueezebox ]; - "srp_energy" = ps: with ps; [ ]; # missing inputs: srpenergy - "ssdp" = ps: with ps; [ aiohttp-cors async-upnp-client defusedxml netdisco pyroute2 zeroconf ]; - "starline" = ps: with ps; [ ]; # missing inputs: starline + "srp_energy" = ps: with ps; [ srpenergy ]; + "ssdp" = ps: with ps; [ aiohttp-cors async-upnp-client defusedxml ifaddr netdisco zeroconf ]; + "starline" = ps: with ps; [ starline ]; "starlingbank" = ps: with ps; [ ]; # missing inputs: starlingbank "startca" = ps: with ps; [ xmltodict ]; "statistics" = ps: with ps; [ sqlalchemy ]; @@ -821,11 +825,13 @@ "switchbot" = ps: with ps; [ pyswitchbot ]; "switcher_kis" = ps: with ps; [ aioswitcher ]; "switchmate" = ps: with ps; [ ]; # missing inputs: pySwitchmate - "syncthru" = ps: with ps; [ url-normalize ]; # missing inputs: pysyncthru + "syncthing" = ps: with ps; [ aiosyncthing ]; + "syncthru" = ps: with ps; [ pysyncthru url-normalize ]; "synology_chat" = ps: with ps; [ ]; - "synology_dsm" = ps: with ps; [ ]; # missing inputs: synologydsm-api + "synology_dsm" = ps: with ps; [ synologydsm-api ]; "synology_srm" = ps: with ps; [ ]; # missing inputs: synology-srm "syslog" = ps: with ps; [ ]; + "system_bridge" = ps: with ps; [ aiohttp-cors ifaddr systembridge zeroconf ]; "system_health" = ps: with ps; [ aiohttp-cors ]; "system_log" = ps: with ps; [ aiohttp-cors ]; "systemmonitor" = ps: with ps; [ psutil ]; @@ -855,7 +861,7 @@ "thinkingcleaner" = ps: with ps; [ ]; # missing inputs: pythinkingcleaner "thomson" = ps: with ps; [ ]; "threshold" = ps: with ps; [ ]; - "tibber" = ps: with ps; [ ]; # missing inputs: pyTibber + "tibber" = ps: with ps; [ pytibber ]; "tikteck" = ps: with ps; [ ]; # missing inputs: tikteck "tile" = ps: with ps; [ pytile ]; "time_date" = ps: with ps; [ ]; @@ -867,14 +873,14 @@ "tomato" = ps: with ps; [ ]; "toon" = ps: with ps; [ aiohttp-cors hass-nabucasa toonapi ]; "torque" = ps: with ps; [ aiohttp-cors ]; - "totalconnect" = ps: with ps; [ ]; # missing inputs: total_connect_client + "totalconnect" = ps: with ps; [ total-connect-client ]; "touchline" = ps: with ps; [ ]; # missing inputs: pytouchline "tplink" = ps: with ps; [ pyhs100 ]; "tplink_lte" = ps: with ps; [ ]; # missing inputs: tp-connected "traccar" = ps: with ps; [ aiohttp-cors stringcase ]; # missing inputs: pytraccar "trace" = ps: with ps; [ ]; "trackr" = ps: with ps; [ ]; # missing inputs: pytrackr - "tradfri" = ps: with ps; [ ]; # missing inputs: pytradfri[async] + "tradfri" = ps: with ps; [ pytradfri ]; "trafikverket_train" = ps: with ps; [ pytrafikverket ]; "trafikverket_weatherstation" = ps: with ps; [ pytrafikverket ]; "transmission" = ps: with ps; [ transmissionrpc ]; @@ -897,9 +903,9 @@ "unifi_direct" = ps: with ps; [ pexpect ]; "unifiled" = ps: with ps; [ unifiled ]; "universal" = ps: with ps; [ ]; - "upb" = ps: with ps; [ ]; # missing inputs: upb_lib + "upb" = ps: with ps; [ upb-lib ]; "upc_connect" = ps: with ps; [ connect-box ]; - "upcloud" = ps: with ps; [ ]; # missing inputs: upcloud-api + "upcloud" = ps: with ps; [ upcloud-api ]; "updater" = ps: with ps; [ distro ]; "upnp" = ps: with ps; [ async-upnp-client ]; "uptime" = ps: with ps; [ ]; @@ -921,7 +927,7 @@ "vesync" = ps: with ps; [ pyvesync ]; "viaggiatreno" = ps: with ps; [ ]; "vicare" = ps: with ps; [ pyvicare ]; - "vilfo" = ps: with ps; [ ]; # missing inputs: vilfo-api-client + "vilfo" = ps: with ps; [ vilfo-api-client ]; "vivotek" = ps: with ps; [ ]; # missing inputs: libpyvivotek "vizio" = ps: with ps; [ pyvizio ]; "vlc" = ps: with ps; [ python-vlc ]; @@ -933,11 +939,12 @@ "vultr" = ps: with ps; [ vultr ]; "w800rf32" = ps: with ps; [ ]; # missing inputs: pyW800rf32 "wake_on_lan" = ps: with ps; [ wakeonlan ]; + "wallbox" = ps: with ps; [ wallbox ]; "waqi" = ps: with ps; [ waqiasync ]; "water_heater" = ps: with ps; [ ]; "waterfurnace" = ps: with ps; [ waterfurnace ]; "watson_iot" = ps: with ps; [ ]; # missing inputs: ibmiotf - "watson_tts" = ps: with ps; [ ]; # missing inputs: ibm-watson + "watson_tts" = ps: with ps; [ ibm-watson ]; "waze_travel_time" = ps: with ps; [ WazeRouteCalculator ]; "weather" = ps: with ps; [ ]; "webhook" = ps: with ps; [ aiohttp-cors ]; @@ -960,11 +967,11 @@ "wunderground" = ps: with ps; [ ]; "x10" = ps: with ps; [ ]; "xbee" = ps: with ps; [ ]; # missing inputs: xbee-helper - "xbox" = ps: with ps; [ aiohttp-cors ]; # missing inputs: xbox-webapi + "xbox" = ps: with ps; [ aiohttp-cors xbox-webapi ]; "xbox_live" = ps: with ps; [ xboxapi ]; "xeoma" = ps: with ps; [ pyxeoma ]; "xiaomi" = ps: with ps; [ ha-ffmpeg ]; - "xiaomi_aqara" = ps: with ps; [ pyxiaomigateway aiohttp-cors netdisco pyroute2 zeroconf ]; + "xiaomi_aqara" = ps: with ps; [ pyxiaomigateway aiohttp-cors ifaddr netdisco zeroconf ]; "xiaomi_miio" = ps: with ps; [ construct python-miio ]; "xiaomi_tv" = ps: with ps; [ pymitv ]; "xmpp" = ps: with ps; [ slixmpp ]; @@ -980,10 +987,10 @@ "zabbix" = ps: with ps; [ ]; # missing inputs: py-zabbix "zamg" = ps: with ps; [ ]; "zengge" = ps: with ps; [ ]; # missing inputs: zengge - "zeroconf" = ps: with ps; [ aiohttp-cors pyroute2 zeroconf ]; + "zeroconf" = ps: with ps; [ aiohttp-cors ifaddr zeroconf ]; "zerproc" = ps: with ps; [ pyzerproc ]; "zestimate" = ps: with ps; [ xmltodict ]; - "zha" = ps: with ps; [ aiohttp-cors bellows pyroute2 pyserial-asyncio pyserial zeroconf zha-quirks zigpy-cc zigpy-deconz zigpy-xbee zigpy-zigate zigpy-znp zigpy ]; + "zha" = ps: with ps; [ aiohttp-cors bellows ifaddr pyserial-asyncio pyserial zeroconf zha-quirks zigpy-cc zigpy-deconz zigpy-xbee zigpy-zigate zigpy-znp zigpy ]; "zhong_hong" = ps: with ps; [ ]; # missing inputs: zhong_hong_hvac "ziggo_mediabox_xl" = ps: with ps; [ ]; # missing inputs: ziggo-mediabox-xl "zodiac" = ps: with ps; [ ]; diff --git a/third_party/nixpkgs/pkgs/servers/home-assistant/default.nix b/third_party/nixpkgs/pkgs/servers/home-assistant/default.nix index f0c0055038..c86258d4a8 100644 --- a/third_party/nixpkgs/pkgs/servers/home-assistant/default.nix +++ b/third_party/nixpkgs/pkgs/servers/home-assistant/default.nix @@ -21,18 +21,31 @@ let defaultOverrides = [ - # Override the version of some packages pinned in Home Assistant's setup.py + # Override the version of some packages pinned in Home Assistant's setup.py and requirements_all.txt + + # Pinned due to API changes in aiopvpc>=2.2.0, remove after 2021.7.0 + (self: super: { + aiopvpc = super.aiopvpc.overridePythonAttrs (oldAttr: rec { + version = "2.1.2"; + src = fetchFromGitHub { + owner = "azogue"; + repo = "aiopvpc"; + rev = "v${version}"; + sha256 = "0s8ki46dh39kw6qvsjcfcxa0gblyi33m3hry137kbi4lw5ws6qhr"; + }; + }); + }) # Pinned due to API changes in iaqualink>=2.0, remove after # https://github.com/home-assistant/core/pull/48137 was merged (self: super: { iaqualink = super.iaqualink.overridePythonAttrs (oldAttrs: rec { - version = "0.3.4"; + version = "0.3.90"; src = fetchFromGitHub { owner = "flz"; repo = "iaqualink-py"; rev = "v${version}"; - sha256 = "16mn6nd9x3hm6j6da99qhwbqs95hh8wx21r1h1m9csl76z77n9lh"; + sha256 = "0c8ckbbr1n8gx5k63ymgyfkbz3d0rbdvghg8fqdvbg4nrigrs5v0"; }; checkInputs = oldAttrs.checkInputs ++ [ python3.pkgs.asynctest ]; }); @@ -43,6 +56,7 @@ let pyjwt = super.pyjwt.overridePythonAttrs (oldAttrs: rec { version = "1.7.1"; src = oldAttrs.src.override { + inherit version; sha256 = "15hflax5qkw1v6nssk1r0wkj83jgghskcmn875m3wgvpzdvajncd"; }; disabledTests = [ @@ -56,6 +70,32 @@ let (mkOverride "ring-doorbell" "0.6.2" "fbd537722a27b3b854c26506d894b7399bb8dc57ff36083285971227a2d46560") + # Pinned due to API changes in pyatmo>=5.1.0 + (self: super: { + pyatmo = super.pyatmo.overridePythonAttrs (oldAttrs: rec { + version = "5.0.1"; + src = fetchFromGitHub { + owner = "jabesq"; + repo = "pyatmo"; + rev = "v${version}"; + sha256 = "0can9v602iqfn0l01fd7gr63qzvcngfm0qka4s1x0pldh6avxmfh"; + }; + }); + }) + + # Pinned due to API changes in pyatv>=0.8.0 + (self: super: { + pyatv = super.pyatv.overridePythonAttrs (olAttrs: rec { + version = "0.7.7"; + src = fetchFromGitHub { + owner = "postlund"; + repo = "pyatv"; + rev = "v${version}"; + sha256 = "sha256-dPnh8XZN7ZVR2rYNnj7GSYXW5I2GNQwD/KRDTgs2AtI="; + }; + }); + }) + # Pinned due to API changes in pyflunearyou>=2.0 (self: super: { pyflunearyou = super.pyflunearyou.overridePythonAttrs (oldAttrs: rec { @@ -109,22 +149,24 @@ let }); }) - # Remove after https://github.com/NixOS/nixpkgs/pull/121854 has passed staging-next + (mkOverride "pysma" "0.4.3" "sha256-vriMnJFS7yfTyDT1f4sx1xEBTQjqc4ZHmkdHp1vcd+Q=") + + # Pinned due to API changes in eebrightbox>=0.0.5 (self: super: { - sqlalchemy = super.sqlalchemy.overridePythonAttrs (oldAttrs: rec { - version = "1.4.13"; - src = oldAttrs.src.override { - inherit version; - sha256 = "0npsg38d11skv04zvsi90j93f6jdgm8666ds2ri7shr1pz1732hx"; + eebrightbox = super.eebrightbox.overridePythonAttrs (oldAttrs: rec { + version = "0.0.4"; + src = fetchFromGitHub { + owner = "krygal"; + repo = "eebrightbox"; + rev = version; + sha256 = "0d8mmpwgrd7gymw5263r1v2wjv6dx6w6pq13d62fkfm4h2hya4a4"; }; - patches = []; - propagatedBuildInputs = [ python3.pkgs.greenlet ]; }); }) - # hass-frontend does not exist in python3.pkgs + # home-assistant-frontend does not exist in python3.pkgs (self: super: { - hass-frontend = self.callPackage ./frontend.nix { }; + home-assistant-frontend = self.callPackage ./frontend.nix { }; }) ]; @@ -155,7 +197,7 @@ let extraBuildInputs = extraPackages py.pkgs; # Don't forget to run parse-requirements.py after updating - hassVersion = "2021.5.5"; + hassVersion = "2021.6.6"; in with py.pkgs; buildPythonApplication rec { pname = "homeassistant"; @@ -167,14 +209,12 @@ in with py.pkgs; buildPythonApplication rec { # don't try and fail to strip 6600+ python files, it takes minutes! dontStrip = true; - inherit availableComponents; - # PyPI tarball is missing tests/ directory src = fetchFromGitHub { owner = "home-assistant"; repo = "core"; rev = version; - sha256 = "1vdxygjik1ay58xgyr1rk12cgy63raqi4fldnd4mlhs4i21c7ff8"; + sha256 = "0r8l2qya9pdl65kq3xrnb1vhmbnxm3bj12hn1wyxmw56l8m9l5d5"; }; # leave this in, so users don't have to constantly update their downstream patch handling @@ -183,7 +223,8 @@ in with py.pkgs; buildPythonApplication rec { postPatch = '' substituteInPlace setup.py \ - --replace "awesomeversion==21.2.3" "awesomeversion" \ + --replace "attrs==21.2.0" "attrs" \ + --replace "awesomeversion==21.4.0" "awesomeversion" \ --replace "bcrypt==3.1.7" "bcrypt" \ --replace "cryptography==3.3.2" "cryptography" \ --replace "pip>=8.0.3,<20.3" "pip" \ @@ -192,7 +233,7 @@ in with py.pkgs; buildPythonApplication rec { ''; propagatedBuildInputs = [ - # Only packages required in setup.py + hass-frontend + # Only packages required in setup.py aiohttp astral async-timeout @@ -202,7 +243,6 @@ in with py.pkgs; buildPythonApplication rec { certifi ciso8601 cryptography - hass-frontend httpx jinja2 pip @@ -215,6 +255,10 @@ in with py.pkgs; buildPythonApplication rec { voluptuous voluptuous-serialize yarl + # Not in setup.py, but used in homeassistant/util/package.py + setuptools + ] ++ lib.optionals (pythonOlder "3.9") [ + backports-zoneinfo ] ++ componentBuildInputs ++ extraBuildInputs; makeWrapperArgs = lib.optional skipPip "--add-flags --skip-pip"; @@ -245,6 +289,7 @@ in with py.pkgs; buildPythonApplication rec { "acmeda" "adguard" "advantage_air" + "aemet" "agent_dvr" "air_quality" "airly" @@ -263,8 +308,11 @@ in with py.pkgs; buildPythonApplication rec { "api" "apple_tv" "apprise" + "aprs" + "arcam_fmj" "arlo" "asuswrt" + "atag" "august" "aurora" "auth" @@ -272,15 +320,23 @@ in with py.pkgs; buildPythonApplication rec { "awair" "aws" "axis" + "azure_devops" + "azure_event_hub" "bayesian" "binary_sensor" "blackbird" + "blebox" + "blink" "blueprint" "bluetooth_le_tracker" + "bmw_connected_drive" + "bond" + "bosch_shc" "braviatv" "broadlink" "brother" "bsblan" + "buienradar" "caldav" "calendar" "camera" @@ -291,12 +347,15 @@ in with py.pkgs; buildPythonApplication rec { "climate" "cloud" "cloudflare" + "color_extractor" "comfoconnect" "command_line" "compensation" "config" "configurator" + "control4" "conversation" + "coolmaster" "coronavirus" "counter" "cover" @@ -315,17 +374,27 @@ in with py.pkgs; buildPythonApplication rec { "dexcom" "dhcp" "dialogflow" + "directv" "discovery" + "doorbird" "dsmr" "dte_energy_bridge" "duckdns" + "dunehd" "dyson" "eafm" + "ecobee" "econet" + "ee_brightbox" "efergy" + "elgato" "emonitor" "emulated_hue" + "emulated_kasa" + "emulated_roku" + "enocean" "enphase_envoy" + "epson" "esphome" "everlights" "ezviz" @@ -340,25 +409,38 @@ in with py.pkgs; buildPythonApplication rec { "file" "filesize" "filter" + "fireservicerota" "firmata" + "flick_electric" "flo" "flume" "flunearyou" "flux" "folder" "folder_watcher" + "foobot" + "foscam" "freebox" "freedns" "fritz" "fritzbox" "fritzbox_callmonitor" "frontend" + "garages_amsterdam" + "garmin_connect" + "gdacs" "generic" "generic_thermostat" "geo_json_events" "geo_location" + "geo_rss_events" "geofency" + "geonetnz_quakes" + "geonetnz_volcano" + "gios" "glances" + "goalzero" + "gogogate2" "google" "google_assistant" "google_domains" @@ -368,13 +450,22 @@ in with py.pkgs; buildPythonApplication rec { "google_wifi" "gpslogger" "graphite" + "gree" "group" + "growatt_server" "guardian" + "habitica" + "hangouts" "harmony" "hassio" "hddtemp" + "heos" + "here_travel_time" + "hisense_aehw4a1" "history" "history_stats" + "hive" + "hlk_sw16" "home_connect" "home_plus_control" "homeassistant" @@ -382,15 +473,20 @@ in with py.pkgs; buildPythonApplication rec { "homekit_controller" "homematic" "homematicip_cloud" + "honeywell" "html5" "http" + "huawei_lte" "hue" + "huisbaasje" "humidifier" + "hvv_departures" "hyperion" "ialarm" "iaqualink" "icloud" "ifttt" + "ign_sismologia" "image" "image_processing" "imap_email_content" @@ -405,14 +501,22 @@ in with py.pkgs; buildPythonApplication rec { "intent" "intent_script" "ios" + "ipma" "ipp" "iqvia" "islamic_prayer_times" + "isy994" + "izone" "jewish_calendar" + "juicenet" + "keenetic_ndms2" "kira" "kmtronic" "knx" "kodi" + "konnected" + "kraken" + "kulersky" "lastfm" "lcn" "light" @@ -438,10 +542,13 @@ in with py.pkgs; buildPythonApplication rec { "meraki" "met" "met_eireann" + "meteoclimatic" + "mhz19" "microsoft_face" "microsoft_face_detect" "microsoft_face_identify" "mikrotik" + "mill" "min_max" "minecraft_server" "minio" @@ -460,6 +567,7 @@ in with py.pkgs; buildPythonApplication rec { "my" "myq" "mysensors" + "nam" "namecheapdns" "neato" "netatmo" @@ -467,6 +575,7 @@ in with py.pkgs; buildPythonApplication rec { "no_ip" "notify" "notion" + "nsw_rural_fire_service_feed" "nuki" "number" "nws" @@ -515,6 +624,7 @@ in with py.pkgs; buildPythonApplication rec { "remote" "rest" "rest_command" + "rflink" "ring" "risco" "rituals_perfume_genie" @@ -531,12 +641,14 @@ in with py.pkgs; buildPythonApplication rec { "script" "search" "season" + "sense" "sensor" "sentry" "sharkiq" "shell_command" "shelly" "shopping_list" + "sia" "sigfox" "sighthound" "simplisafe" @@ -557,10 +669,13 @@ in with py.pkgs; buildPythonApplication rec { "soundtouch" "spaceapi" "speedtestdotnet" + "spider" "spotify" "sql" "squeezebox" + "srp_energy" "ssdp" + "starline" "startca" "statistics" "statsd" @@ -571,6 +686,9 @@ in with py.pkgs; buildPythonApplication rec { "surepetcare" "switch" "switcher_kis" + "syncthing" + "syncthru" + "synology_dsm" "system_health" "system_log" "tado" @@ -580,16 +698,20 @@ in with py.pkgs; buildPythonApplication rec { "telegram" "tellduslive" "template" - "tesla" + # disable tesla comonent tests while typer is incompatible with click>=8.0 + # "tesla" "threshold" + "tibber" "tile" "time_date" "timer" "tod" "tomato" "toon" + "totalconnect" "tplink" "trace" + "tradfri" "transmission" "trend" "tts" @@ -602,6 +724,8 @@ in with py.pkgs; buildPythonApplication rec { "unifi" "unifi_direct" "universal" + "upb" + "upcloud" "updater" "upnp" "uptime" @@ -610,15 +734,18 @@ in with py.pkgs; buildPythonApplication rec { "uvc" "vacuum" "velbus" + "venstar" "vera" "verisure" "version" "vesync" + "vilfo" "vizio" "voicerss" "volumio" "vultr" "wake_on_lan" + "wallbox" "water_heater" "waze_travel_time" "weather" @@ -633,6 +760,7 @@ in with py.pkgs; buildPythonApplication rec { "worldclock" "wsdot" "wunderground" + "xbox" "xiaomi" "xiaomi_aqara" "xiaomi_miio" @@ -661,8 +789,12 @@ in with py.pkgs; buildPythonApplication rec { "--only-rerun RuntimeError" # enable full variable printing on error "--showlocals" + # here_travel_time/test_sensor.py: Tries to access HERE API: herepy.error.HEREError: Error occured on __get + "--deselect tests/components/here_travel_time/test_sensor.py::test_invalid_credentials" # screenlogic/test_config_flow.py: Tries to send out UDP broadcasts "--deselect tests/components/screenlogic/test_config_flow.py::test_form_cannot_connect" + # abode/test_camera.py: Race condition in pickle file creationg + "--deselect tests/components/abode/test_camera.py::test_camera_off" # asuswrt/test_config_flow.py: Sandbox network limitations, fails with unexpected error "--deselect tests/components/asuswrt/test_config_flow.py::test_on_connect_failed" # shelly/test_config_flow.py: Tries to join multicast group @@ -681,6 +813,11 @@ in with py.pkgs; buildPythonApplication rec { "--deselect tests/components/shelly/test_config_flow.py::test_zeroconf_require_auth" # prometheus/test_init.py: Spurious AssertionError regarding humidifier_target_humidity_percent metric "--deselect tests/components/prometheus/test_init.py::test_view" + # smhi/test_init.py: Tries to fetch data from the network: socket.gaierror: [Errno -2] Name or service not known + "--deselect tests/components/smhi/test_init.py::test_remove_entry" + # wallbox/test_config_flow.py: Tries to connect to api.wall-box.cim: Failed to establish a new connection: [Errno -2] Name or service not known + "--deselect tests/components/wallbox/test_config_flow.py::test_form_invalid_auth" + "--deselect tests/components/wallbox/test_config_flow.py::test_form_cannot_connect" # tests are located in tests/ "tests" # dynamically add packages required for component tests @@ -714,6 +851,8 @@ in with py.pkgs; buildPythonApplication rec { # onboarding tests rpi_power component, for which we are lacking rpi_bad_power library "test_onboarding_core_sets_up_rpi_power" "test_onboarding_core_no_rpi_power" + # hue/test_sensor_base.py: Race condition when counting events + "test_hue_events" ]; preCheck = '' @@ -735,7 +874,8 @@ in with py.pkgs; buildPythonApplication rec { ''; passthru = { - inherit (py.pkgs) hass-frontend; + inherit availableComponents; + python = py; tests = { inherit (nixosTests) home-assistant; }; diff --git a/third_party/nixpkgs/pkgs/servers/home-assistant/frontend.nix b/third_party/nixpkgs/pkgs/servers/home-assistant/frontend.nix index bd49065442..f59f3943cd 100644 --- a/third_party/nixpkgs/pkgs/servers/home-assistant/frontend.nix +++ b/third_party/nixpkgs/pkgs/servers/home-assistant/frontend.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { # the frontend version corresponding to a specific home-assistant version can be found here # https://github.com/home-assistant/home-assistant/blob/master/homeassistant/components/frontend/manifest.json pname = "home-assistant-frontend"; - version = "20210504.0"; + version = "20210603.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-rNdqflWT8bmGHtAGGfq4xVxDcnK+EZU9qejRWQPJmUI="; + sha256 = "sha256-2UhbtaxEcOkD9Z5g9gZs+QjuVLXZGCEcmKoxRtIEYxw="; }; # there is nothing to strip in this package diff --git a/third_party/nixpkgs/pkgs/servers/home-assistant/parse-requirements.py b/third_party/nixpkgs/pkgs/servers/home-assistant/parse-requirements.py index b6ff5662f9..2cdc44caaa 100755 --- a/third_party/nixpkgs/pkgs/servers/home-assistant/parse-requirements.py +++ b/third_party/nixpkgs/pkgs/servers/home-assistant/parse-requirements.py @@ -23,6 +23,7 @@ import subprocess import sys import tarfile import tempfile +from functools import reduce from io import BytesIO from typing import Dict, Optional, Set, Any from urllib.request import urlopen @@ -31,7 +32,7 @@ from rich.console import Console from rich.table import Table COMPONENT_PREFIX = "homeassistant.components" -PKG_SET = "python3Packages" +PKG_SET = "home-assistant.python.pkgs" # If some requirements are matched by multiple Python packages, # the following can be used to choose one of them @@ -104,6 +105,7 @@ def dump_packages() -> Dict[str, Dict[str, str]]: "-qa", "-A", PKG_SET, + "--arg", "config", "{ allowAliases = false; }", "--json", ] ) @@ -181,15 +183,10 @@ def main() -> None: if attr_path is not None: # Add attribute path without "python3Packages." prefix attr_paths.append(attr_path[len(PKG_SET + ".") :]) - # home-assistant-frontend is always in propagatedBuildInputs - elif name != 'home-assistant-frontend': + else: missing_reqs.append(name) else: build_inputs[component] = (attr_paths, missing_reqs) - n_diff = len(reqs) > len(build_inputs[component]) - if n_diff > 0: - print("Component {} is missing {} dependencies".format(component, n_diff)) - print("missing requirements: {}".format(missing_reqs)) with open(os.path.dirname(sys.argv[0]) + "/component-packages.nix", "w") as f: f.write("# Generated by parse-requirements.py\n") @@ -209,6 +206,12 @@ def main() -> None: f.write(" };\n") f.write("}\n") + supported_components = reduce(lambda n, c: n + (build_inputs[c][1] == []), + components.keys(), 0) + total_components = len(components) + print(f"{supported_components} / {total_components} components supported, " + f"i.e. {supported_components / total_components:.2%}") + if outdated: table = Table(title="Outdated dependencies") table.add_column("Package") diff --git a/third_party/nixpkgs/pkgs/servers/home-assistant/update.sh b/third_party/nixpkgs/pkgs/servers/home-assistant/update.sh index e80b7acbed..5ed865f411 100755 --- a/third_party/nixpkgs/pkgs/servers/home-assistant/update.sh +++ b/third_party/nixpkgs/pkgs/servers/home-assistant/update.sh @@ -26,7 +26,7 @@ sed -i -e "s/hassVersion =.*/hassVersion = \"${TARGET_VERSION}\";/" \ ./parse-requirements.py ( cd ../../.. - nix-update --version "$FRONTEND_VERSION" home-assistant.hass-frontend + nix-update --version "$FRONTEND_VERSION" home-assistant.python.pkgs.home-assistant-frontend nix-update --version "$TARGET_VERSION" --build home-assistant ) diff --git a/third_party/nixpkgs/pkgs/servers/hqplayerd/default.nix b/third_party/nixpkgs/pkgs/servers/hqplayerd/default.nix new file mode 100644 index 0000000000..ea6cd9ae04 --- /dev/null +++ b/third_party/nixpkgs/pkgs/servers/hqplayerd/default.nix @@ -0,0 +1,94 @@ +{ stdenv +, alsa-lib +, autoPatchelfHook +, cairo +, fetchurl +, flac +, gnome +, gssdp +, gupnp +, lib +, libgmpris +, llvmPackages_10 +, rpmextract +, wavpack +}: + +stdenv.mkDerivation rec { + pname = "hqplayerd"; + version = "4.24.1-62"; + + src = fetchurl { + # FIXME: use the fc34 sources when we get glibc 2.33 in nixpkgs + # c.f. https://github.com/NixOS/nixpkgs/pull/111616 + url = "https://www.signalyst.eu/bins/${pname}/fc33/${pname}-${version}.fc33.x86_64.rpm"; + sha256 = "sha256-lnejPkw6X3wRtjXTsdipEy6yZCEsDARhLPnySIltHXs="; + }; + + unpackPhase = '' + ${rpmextract}/bin/rpmextract $src + ''; + + nativeBuildInputs = [ autoPatchelfHook rpmextract ]; + + buildInputs = [ + alsa-lib + cairo + flac + gnome.rygel + gssdp + gupnp + libgmpris + llvmPackages_10.openmp + wavpack + ]; + + dontConfigure = true; + dontBuild = true; + + installPhase = '' + runHook preInstall + + # main executable + mkdir -p $out/bin + cp ./usr/bin/hqplayerd $out/bin + + # udev rules + mkdir -p $out/etc/udev/rules.d + cp ./etc/udev/rules.d/50-taudio2.rules $out/etc/udev/rules.d + + # kernel module cfgs + mkdir -p $out/etc/modules-load.d + cp ./etc/modules-load.d/taudio2.conf $out/etc/modules-load.d + + # systemd service file + mkdir -p $out/lib/systemd/system + cp ./usr/lib/systemd/system/hqplayerd.service $out/lib/systemd/system + + # documentation + mkdir -p $out/share/doc/hqplayerd + cp ./usr/share/doc/hqplayerd/* $out/share/doc/hqplayerd + + # misc service support files + mkdir -p $out/var/lib/hqplayerd + cp -r ./var/hqplayer/web $out/var/lib/hqplayerd + + runHook postInstall + ''; + + postInstall = '' + substituteInPlace $out/lib/systemd/system/hqplayerd.service \ + --replace /usr/bin/hqplayerd $out/bin/hqplayerd + ''; + + postFixup = '' + patchelf --replace-needed libomp.so.5 libomp.so $out/bin/hqplayerd + ''; + + meta = with lib; { + homepage = "https://www.signalyst.com/custom.html"; + description = "High-end upsampling multichannel software embedded HD-audio player"; + license = licenses.unfree; + maintainers = with maintainers; [ lovesegfault ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/servers/http/apache-httpd/2.4.nix b/third_party/nixpkgs/pkgs/servers/http/apache-httpd/2.4.nix index 3fff2ac9fc..a8caf1da17 100644 --- a/third_party/nixpkgs/pkgs/servers/http/apache-httpd/2.4.nix +++ b/third_party/nixpkgs/pkgs/servers/http/apache-httpd/2.4.nix @@ -17,12 +17,12 @@ assert ldapSupport -> aprutil.ldapSupport && openldap != null; assert http2Support -> nghttp2 != null; stdenv.mkDerivation rec { - version = "2.4.47"; + version = "2.4.48"; pname = "apache-httpd"; src = fetchurl { url = "mirror://apache/httpd/httpd-${version}.tar.bz2"; - sha256 = "sha256-I9AG28jleBFqETj6RX7qgkBIRY6JyECHIZ8DcogMA8o="; + sha256 = "0v4npxnvih5mlxx6dywwhhfs8xvgcckc0hxzwk3hi0g8nbkjdj0v"; }; # FIXME: -dev depends on -doc diff --git a/third_party/nixpkgs/pkgs/servers/http/bozohttpd/default.nix b/third_party/nixpkgs/pkgs/servers/http/bozohttpd/default.nix index c01be041e8..1574a953b1 100644 --- a/third_party/nixpkgs/pkgs/servers/http/bozohttpd/default.nix +++ b/third_party/nixpkgs/pkgs/servers/http/bozohttpd/default.nix @@ -68,7 +68,7 @@ stdenv.mkDerivation rec { ++ optional (stdenv.hostPlatform.libc != "libSystem") "-lcrypt" ++ optional (luaSupport) "-llua" ++ optionals (sslSupport) [ "-lssl" "-lcrypto" ]; - makeFlags = [ "LDADD=$(_LDADD)" "prefix=$(out)" "MANDIR=$(out)/share/man" "BINOWN=" ]; + makeFlags = [ "LDADD=$(_LDADD)" ]; doCheck = true; checkInputs = [ inetutils wget ]; diff --git a/third_party/nixpkgs/pkgs/servers/http/envoy/default.nix b/third_party/nixpkgs/pkgs/servers/http/envoy/default.nix index 57c0e22d8a..d26782560a 100644 --- a/third_party/nixpkgs/pkgs/servers/http/envoy/default.nix +++ b/third_party/nixpkgs/pkgs/servers/http/envoy/default.nix @@ -3,7 +3,9 @@ , fetchFromGitHub , stdenv , cmake +, gn , go +, jdk , ninja , python3 , nixosTests @@ -15,8 +17,8 @@ let # However, the version string is more useful for end-users. # These are contained in a attrset of their own to make it obvious that # people should update both. - version = "1.16.2"; - commit = "e98e41a8e168af7acae8079fc0cd68155f699aa3"; + version = "1.17.3"; + commit = "46bf743b97d0d3f01ff437b2f10cc0bd9cdfe6e4"; }; in buildBazelPackage rec { @@ -26,7 +28,7 @@ buildBazelPackage rec { owner = "envoyproxy"; repo = "envoy"; rev = srcVer.commit; - hash = "sha256-aWVMRKFCZzf9/96NRPCP4jiW38DJhXyi0gEqW7uIpnQ="; + hash = "sha256:09zzr4h3zjsb2rkxrvlazpx0jy33yn9j65ilxiqbvv0ckaralqfc"; extraPostFetch = '' chmod -R +w $out @@ -36,29 +38,29 @@ buildBazelPackage rec { ''; }; - patches = [ - # Quiche needs to be updated to compile under newer GCC. - # This is a manual backport of https://github.com/envoyproxy/envoy/pull/13949. - ./0001-quiche-update-QUICHE-tar-13949.patch - - # upb needs to be updated to compile under newer GCC. - # This is a manual backport of https://github.com/protocolbuffers/upb/commit/9bd23dab4240b015321a53c45b3c9e4847fbf020. - ./0002-Add-upb-patch-to-make-it-compile-under-GCC10.patch - ]; postPatch = '' sed -i 's,#!/usr/bin/env python3,#!${python3}/bin/python,' bazel/foreign_cc/luajit.patch + sed -i '/javabase=/d' .bazelrc + # Patch paths to build tools, and disable gold because it just segfaults. + substituteInPlace bazel/external/wee8.genrule_cmd \ + --replace '"''$$gn"' '"''$$(command -v gn)"' \ + --replace '"''$$ninja"' '"''$$(command -v ninja)"' \ + --replace '"''$$WEE8_BUILD_ARGS"' '"''$$WEE8_BUILD_ARGS use_gold=false"' ''; nativeBuildInputs = [ cmake python3 + gn go + jdk ninja ]; fetchAttrs = { - sha256 = "0q72c2zrl5vc8afkhkwyalb2h0mxn3133d4b9z4gag0p95wbwgc0"; + sha256 = "sha256:1cy2b73x8jzczq9z9c1kl7zrg5iasvsakb50zxn4mswpmajkbj5h"; dontUseCmakeConfigure = true; + dontUseGnConfigure = true; preInstall = '' # Strip out the path to the build location (by deleting the comment line). find $bazelOut/external -name requirements.bzl | while read requirements; do @@ -78,10 +80,14 @@ buildBazelPackage rec { >$bazelOut/external/config_validation_pip3/PyYAML-5.3.1-cp38-cp38-linux_x86_64.whl >$bazelOut/external/protodoc_pip3/PyYAML-5.3.1-cp38-cp38-linux_x86_64.whl >$bazelOut/external/thrift_pip3/thrift-0.13.0-cp38-cp38-linux_x86_64.whl + + # Remove Unix timestamps from go cache. + rm -rf $bazelOut/external/bazel_gazelle_go_repository_cache/{gocache,pkg/mod/cache,pkg/sumdb} ''; }; buildAttrs = { dontUseCmakeConfigure = true; + dontUseGnConfigure = true; dontUseNinjaInstall = true; preConfigure = '' sed -i 's,#!/usr/bin/env bash,#!${stdenv.shell},' $bazelOut/external/rules_foreign_cc/tools/build_defs/framework.bzl @@ -98,7 +104,6 @@ buildBazelPackage rec { ''; }; - fetchConfigured = true; removeRulesCC = false; removeLocalConfigCc = true; removeLocal = false; diff --git a/third_party/nixpkgs/pkgs/servers/http/nginx/modules.nix b/third_party/nixpkgs/pkgs/servers/http/nginx/modules.nix index 0725b674a3..e6cbff3316 100644 --- a/third_party/nixpkgs/pkgs/servers/http/nginx/modules.nix +++ b/third_party/nixpkgs/pkgs/servers/http/nginx/modules.nix @@ -321,13 +321,13 @@ in }; }; - rtmp ={ + rtmp = { src = fetchFromGitHub { name = "rtmp"; owner = "arut"; repo = "nginx-rtmp-module"; - rev = "v1.2.1"; - sha256 = "0na1aam176irz6w148hnvamqy1ilbn4abhdzkva0yrm35a3ksbzn"; + rev = "v1.2.2"; + sha256 = "0y45bswk213yhkc2v1xca2rnsxrhx8v6azxz9pvi71vvxcggqv6h"; }; }; diff --git a/third_party/nixpkgs/pkgs/servers/http/nginx/quic.nix b/third_party/nixpkgs/pkgs/servers/http/nginx/quic.nix index 38a4bd9cdf..a886486472 100644 --- a/third_party/nixpkgs/pkgs/servers/http/nginx/quic.nix +++ b/third_party/nixpkgs/pkgs/servers/http/nginx/quic.nix @@ -6,8 +6,8 @@ callPackage ./generic.nix args { src = fetchhg { url = "https://hg.nginx.org/nginx-quic"; - rev = "12f18e0bca09"; # branch=quic - sha256 = "1lr6zlny26kamczgk8ddscmy5fp5mzxqcppwhjhvq1a029a0r4b7"; + rev = "1fec68e322d0"; # branch=quic + sha256 = "0nr1mjic215yc6liyv1kfwhfdija3q2sw3qdwibds5vkg330vmw8"; }; preConfigure = '' diff --git a/third_party/nixpkgs/pkgs/servers/http/pomerium/default.nix b/third_party/nixpkgs/pkgs/servers/http/pomerium/default.nix index 0605a12eca..036e44ca62 100644 --- a/third_party/nixpkgs/pkgs/servers/http/pomerium/default.nix +++ b/third_party/nixpkgs/pkgs/servers/http/pomerium/default.nix @@ -11,15 +11,15 @@ let in buildGoModule rec { pname = "pomerium"; - version = "0.13.3"; + version = "0.14.4"; src = fetchFromGitHub { owner = "pomerium"; repo = "pomerium"; rev = "v${version}"; - hash = "sha256-g0w1aIHvf2rJANvGWHeUxdnyCDsvy/PQ9Kp8nDdT/0w="; + hash = "sha256:097csr8f43cn0iq030ajvvpwnwcfmjxyyk6pcisdy937axlrzska"; }; - vendorSha256 = "sha256-grihU85OcGyf9/KKrv87xZonX5r+Z1oHQTf84Ya61fg="; + vendorSha256 = "sha256:0n45xvwjiqyh41dsm4z1rnkgkycf5wfmacm804hqnd5rz7xk2shf"; subPackages = [ "cmd/pomerium" "cmd/pomerium-cli" diff --git a/third_party/nixpkgs/pkgs/servers/http/tomcat/default.nix b/third_party/nixpkgs/pkgs/servers/http/tomcat/default.nix index 78e108d8c8..506b692e68 100644 --- a/third_party/nixpkgs/pkgs/servers/http/tomcat/default.nix +++ b/third_party/nixpkgs/pkgs/servers/http/tomcat/default.nix @@ -20,31 +20,25 @@ let mv $out/webapps $webapps/ ''; - meta = { + meta = with lib; { homepage = "https://tomcat.apache.org/"; description = "An implementation of the Java Servlet and JavaServer Pages technologies"; - platforms = with lib.platforms; all; - maintainers = with lib.maintainers; [ danbst ]; - license = [ lib.licenses.asl20 ]; + platforms = platforms.all; + maintainers = [ ]; + license = [ licenses.asl20 ]; }; }); in { - tomcat7 = common { - versionMajor = "7"; - versionMinor = "0.100"; - sha256 = "0wjjnvxjz0xbnsfgyp0xc7nlij4z093v54hg59vww2nmkz5mg01v"; - }; - - tomcat8 = common { - versionMajor = "8"; - versionMinor = "5.51"; - sha256 = "1zmg0hi4nw4y5sknd0jgq9lb3bncjjscay5fdiiq3qh5cs0wsvl3"; - }; - tomcat9 = common { versionMajor = "9"; - versionMinor = "0.31"; - sha256 = "0hybcy280qhhp9if58xw0rmyyqz1m1bzby7qnwz3y2wc1y4is48v"; + versionMinor = "0.46"; + sha256 = "02p1d7xkmfna5brwi5imjz83g5va1g6fxkiaj4q22l8jpkr6xf6h"; + }; + + tomcat10 = common { + versionMajor = "10"; + versionMinor = "0.6"; + sha256 = "1bpcxpsfws3b8ykq53vrcx3f04mvs5if80p329jm3x2dvdvj3d9n"; }; } diff --git a/third_party/nixpkgs/pkgs/servers/http/tomcat/tomcat-native.nix b/third_party/nixpkgs/pkgs/servers/http/tomcat/tomcat-native.nix index c9c4453cf5..dfcbe5d0f1 100644 --- a/third_party/nixpkgs/pkgs/servers/http/tomcat/tomcat-native.nix +++ b/third_party/nixpkgs/pkgs/servers/http/tomcat/tomcat-native.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "tomcat-native"; - version = "1.2.28"; + version = "1.2.30"; src = fetchurl { url = "mirror://apache/tomcat/tomcat-connectors/native/${version}/source/${pname}-${version}-src.tar.gz"; - sha512 = "16b8659dcd228ea153d05c9ae19e3d97add944315f3b8b42905162d0e4e8a28fd51a172d59d7da8508271ecad0b8ac025a386895565acaf8e2ba11fba77492bb"; + sha512 = "51a8c55214de166cace193c3330abe77cabea56c2d05efc8c3408bc06369c328899376c94c572725ebe2887f2faf99fea05d1819fa84c712d57fd309d0476953"; }; sourceRoot = "${pname}-${version}-src/native"; diff --git a/third_party/nixpkgs/pkgs/servers/imgproxy/default.nix b/third_party/nixpkgs/pkgs/servers/imgproxy/default.nix index 780b3c5eb2..b0d0136024 100644 --- a/third_party/nixpkgs/pkgs/servers/imgproxy/default.nix +++ b/third_party/nixpkgs/pkgs/servers/imgproxy/default.nix @@ -3,16 +3,16 @@ buildGoModule rec { pname = "imgproxy"; - version = "2.16.3"; + version = "2.16.4"; src = fetchFromGitHub { owner = pname; repo = pname; - sha256 = "sha256-WK5TAI+dYmBLNp1A0p9DbWF7ZEw3dqr+Cuwy7LzrdBM="; + sha256 = "sha256-25oOGkTc19PHlU0Va7IPKrvGK9pDrGqKZa6qNFMVphQ="; rev = "v${version}"; }; - vendorSha256 = "sha256-7IpMgsATQ1SMuBOF9agHIN2Lx6OKxRr0Zk5SRFxHiQ4="; + vendorSha256 = "sha256-y8cXe4+jTLnM7K+na2VHGXkPgZjFYdgtDd14D8KiCas="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/servers/irc/solanum/default.nix b/third_party/nixpkgs/pkgs/servers/irc/solanum/default.nix index 8080d82a18..d5e70799cf 100644 --- a/third_party/nixpkgs/pkgs/servers/irc/solanum/default.nix +++ b/third_party/nixpkgs/pkgs/servers/irc/solanum/default.nix @@ -25,6 +25,10 @@ stdenv.mkDerivation rec { ./dont-create-logdir.patch ]; + postPatch = '' + substituteInPlace include/defaults.h --replace 'ETCPATH "' '"/etc/solanum' + ''; + configureFlags = [ "--enable-epoll" "--enable-ipv6" @@ -57,7 +61,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "An IRCd for unified networks"; homepage = "https://github.com/solanum-ircd/solanum"; - license = licenses.gpl2Only; + license = licenses.gpl2Plus; maintainers = with maintainers; [ hexa ]; platforms = platforms.unix; }; diff --git a/third_party/nixpkgs/pkgs/servers/jackett/default.nix b/third_party/nixpkgs/pkgs/servers/jackett/default.nix index 116fd9bae9..5bb43ae316 100644 --- a/third_party/nixpkgs/pkgs/servers/jackett/default.nix +++ b/third_party/nixpkgs/pkgs/servers/jackett/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "jackett"; - version = "0.18.231"; + version = "0.18.364"; src = fetchurl { url = "https://github.com/Jackett/Jackett/releases/download/v${version}/Jackett.Binaries.Mono.tar.gz"; - sha256 = "sha256-fl0M4Emstp21CrrE4Znzwi1XvTzx6TpPnNKYM65aoN4="; + sha256 = "sha256-QcwrgW07tP0PxA6UWqMf7VT0Y8uBZFJY9Uz7seorEfs="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/servers/jellyfin/default.nix b/third_party/nixpkgs/pkgs/servers/jellyfin/default.nix index 636a1b6d02..8164330c55 100644 --- a/third_party/nixpkgs/pkgs/servers/jellyfin/default.nix +++ b/third_party/nixpkgs/pkgs/servers/jellyfin/default.nix @@ -41,13 +41,13 @@ let in stdenv.mkDerivation rec { pname = "jellyfin"; - version = "10.7.5"; # ensure that jellyfin-web has matching version + version = "10.7.6"; # ensure that jellyfin-web has matching version src = fetchFromGitHub { owner = "jellyfin"; repo = "jellyfin"; rev = "v${version}"; - sha256 = "DlbNZpomNki9zrfG0C7He0Xrq79vx4Rn8ixpekvk34E="; + sha256 = "3wXB9HrOaLgHJjWpwPWVtcy8xcYBgZoE29hWqf1On2Q="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/servers/jellyfin/web.nix b/third_party/nixpkgs/pkgs/servers/jellyfin/web.nix index 1bd4a305a7..fe7f577bf4 100644 --- a/third_party/nixpkgs/pkgs/servers/jellyfin/web.nix +++ b/third_party/nixpkgs/pkgs/servers/jellyfin/web.nix @@ -7,7 +7,7 @@ stdenv.mkDerivation rec { pname = "jellyfin-web"; - version = "10.7.5"; + version = "10.7.6"; # TODO: on the next major release remove src.postFetch # and use the lock file in web-update.sh: # https://github.com/jellyfin/jellyfin-web/commit/6efef9680d55a93f4333ef8bfb65a8a650c99a49 @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { owner = "jellyfin"; repo = "jellyfin-web"; rev = "v${version}"; - sha256 = "5y6hWEDxY5WbOUdjujmuMV3bQVvYU2J9oIANBVN5XOc="; + sha256 = "T5a17mAvx7fLla2jQp1dNswijeUbBQB1RA1ZkVpLWqM="; postFetch = '' mkdir -p $out cd $out diff --git a/third_party/nixpkgs/pkgs/servers/jicofo/default.nix b/third_party/nixpkgs/pkgs/servers/jicofo/default.nix index 49e40713a0..37b5a1bfaa 100644 --- a/third_party/nixpkgs/pkgs/servers/jicofo/default.nix +++ b/third_party/nixpkgs/pkgs/servers/jicofo/default.nix @@ -2,10 +2,10 @@ let pname = "jicofo"; - version = "1.0-690"; + version = "1.0-756"; src = fetchurl { url = "https://download.jitsi.org/stable/${pname}_${version}-1_all.deb"; - sha256 = "1w5nz2p6scd7w0ac93vhxlk5i8in5160c0icwl27m4x4km9xf6al"; + sha256 = "07qmxqp1llpn8kh590iz35zk17c2k4yg7i43nb2l0sfm40crpwfz"; }; in stdenv.mkDerivation { diff --git a/third_party/nixpkgs/pkgs/servers/jitsi-videobridge/default.nix b/third_party/nixpkgs/pkgs/servers/jitsi-videobridge/default.nix index 35cd690601..283164380b 100644 --- a/third_party/nixpkgs/pkgs/servers/jitsi-videobridge/default.nix +++ b/third_party/nixpkgs/pkgs/servers/jitsi-videobridge/default.nix @@ -2,10 +2,10 @@ let pname = "jitsi-videobridge2"; - version = "2.1-416-g2f43d1b4"; + version = "2.1-508-gb24f756c"; src = fetchurl { url = "https://download.jitsi.org/stable/${pname}_${version}-1_all.deb"; - sha256 = "0s9wmbba1nlpxaawzmaqg92882y5sfs2ws64w5sqvpi7n77hy54m"; + sha256 = "0kjsm3k7chgrfvvqxkp8xdw6wfrs122j4h8gcvyvpf9lg51p199g"; }; in stdenv.mkDerivation { diff --git a/third_party/nixpkgs/pkgs/servers/keycloak/default.nix b/third_party/nixpkgs/pkgs/servers/keycloak/default.nix index 9788e04ac4..8cfefcf979 100644 --- a/third_party/nixpkgs/pkgs/servers/keycloak/default.nix +++ b/third_party/nixpkgs/pkgs/servers/keycloak/default.nix @@ -18,11 +18,11 @@ let in stdenv.mkDerivation rec { pname = "keycloak"; - version = "13.0.1"; + version = "14.0.0"; src = fetchzip { url = "https://github.com/keycloak/keycloak/releases/download/${version}/keycloak-${version}.zip"; - sha256 = "sha256-81i8Yf9rEuHtUDqYThUCn0/Lb9YokRi4tGi/Ooyyxr8="; + sha256 = "sha256-NH2uNiYZZrEYE5DG2kDXzLN7/GgXR8IfBqRb6EoKA9s="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/servers/ldap/389/default.nix b/third_party/nixpkgs/pkgs/servers/ldap/389/default.nix index db9041574f..e445184b95 100644 --- a/third_party/nixpkgs/pkgs/servers/ldap/389/default.nix +++ b/third_party/nixpkgs/pkgs/servers/ldap/389/default.nix @@ -1,32 +1,107 @@ -{ lib, stdenv, fetchurl, fetchpatch, autoreconfHook, pkg-config, doxygen, perl, pam, nspr, nss, openldap -, db, cyrus_sasl, svrcore, icu, net-snmp, libkrb5, pcre, perlPackages, libevent, openssl, python3 +{ stdenv +, autoreconfHook +, fetchFromGitHub +, lib + +, bzip2 +, cmocka +, cracklib +, cyrus_sasl +, db +, doxygen +, icu +, libevent +, libkrb5 +, lm_sensors +, net-snmp +, nspr +, nss +, openldap +, openssl +, pcre +, perl +, perlPackages +, pkg-config +, python3 +, svrcore +, zlib + +, enablePamPassthru ? true +, pam + +, enableCockpit ? true +, rsync + +, enableDna ? true +, enableLdapi ? true +, enableAutobind ? false +, enableAutoDnSuffix ? false +, enableBitwise ? true +, enableAcctPolicy ? true +, enablePosixWinsync ? true }: stdenv.mkDerivation rec { pname = "389-ds-base"; - version = "1.3.9.1"; + version = "2.0.5"; - src = fetchurl { - url = "https://releases.pagure.org/${pname}/${pname}-${version}.tar.bz2"; - sha256 = "141iv1phgk1lw74sfjj3v7wy6qs0q56lvclwv2p0hqn1wg8ic4q6"; + src = fetchFromGitHub { + owner = "389ds"; + repo = pname; + rev = "${pname}-${version}"; + sha256 = "sha256-H0G8py4sB+2CSZKyCIb2TCIXOpnPx7udWUEK4Tg5TD8="; }; nativeBuildInputs = [ autoreconfHook pkg-config doxygen ]; - buildInputs = [ - perl pam nspr nss openldap db cyrus_sasl svrcore icu - net-snmp libkrb5 pcre libevent openssl python3 - ] ++ (with perlPackages; [ MozillaLdap NetAddrIP DBFile ]); - patches = [ - (fetchpatch { - name = "389-ds-nss.patch"; - url = "https://aur.archlinux.org/cgit/aur.git/plain/nss.patch?h=389-ds-base&id=b80ed52cc65ff9b1d72f8ebc54dbd462b12f6be9"; - sha256 = "07z7jl9z4gzhk3k6qyfn558xl76js8041llyr5n99h20ckkbwagk"; - }) - ]; + buildInputs = [ + bzip2 + cracklib + cyrus_sasl + db + icu + libevent + libkrb5 + lm_sensors + net-snmp + nspr + nss + openldap + openssl + pcre + perl + python3 + svrcore + zlib + + # tests + cmocka + libevent + + # lib389 + (python3.withPackages (ps: with ps; [ + setuptools + ldap + six + pyasn1 + pyasn1-modules + dateutil + argcomplete + libselinux + ])) + + # logconv.pl + perlPackages.DBFile + perlPackages.ArchiveTar + ] + ++ lib.optional enableCockpit rsync + ++ lib.optional enablePamPassthru pam; + postPatch = '' substituteInPlace Makefile.am \ --replace 's,@perlpath\@,$(perldir),g' 's,@perlpath\@,$(perldir) $(PERLPATH),g' + + patchShebangs ./buildnum.py ./ldap/servers/slapd/mkDBErrStrs.py ''; preConfigure = '' @@ -38,21 +113,37 @@ stdenv.mkDerivation rec { export PERLPATH ''; - configureFlags = [ - "--sysconfdir=/etc" - "--localstatedir=/var" - "--with-openldap" - "--with-db" - "--with-db-inc=${db.dev}/include" - "--with-db-lib=${db.out}/lib" - "--with-sasl=${cyrus_sasl.dev}" - "--with-netsnmp=yes" - "--with-netsnmp-inc=${lib.getDev net-snmp}/include" - "--with-netsnmp-lib=${lib.getLib net-snmp}/lib" - ]; + configureFlags = + let + mkEnable = cond: name: if cond then "--enable-${name}" else "--disable-${name}"; + in + [ + "--enable-cmocka" + "--localstatedir=/var" + "--sysconfdir=/etc" + "--with-db-inc=${db.dev}/include" + "--with-db-lib=${db.out}/lib" + "--with-db=yes" + "--with-netsnmp-inc=${lib.getDev net-snmp}/include" + "--with-netsnmp-lib=${lib.getLib net-snmp}/lib" + "--with-netsnmp=yes" + "--with-openldap" + + "${mkEnable enableCockpit "cockpit"}" + "${mkEnable enablePamPassthru "pam-passthru"}" + "${mkEnable enableDna "dna"}" + "${mkEnable enableLdapi "ldapi"}" + "${mkEnable enableAutobind "autobind"}" + "${mkEnable enableAutoDnSuffix "auto-dn-suffix"}" + "${mkEnable enableBitwise "bitwise"}" + "${mkEnable enableAcctPolicy "acctpolicy"}" + "${mkEnable enablePosixWinsync "posix-winsync"}" + ]; enableParallelBuilding = true; + doCheck = true; + installFlags = [ "sysconfdir=${placeholder "out"}/etc" "localstatedir=${placeholder "TMPDIR"}" diff --git a/third_party/nixpkgs/pkgs/servers/mail/dovecot/default.nix b/third_party/nixpkgs/pkgs/servers/mail/dovecot/default.nix index 337405ff67..0bd0a8707c 100644 --- a/third_party/nixpkgs/pkgs/servers/mail/dovecot/default.nix +++ b/third_party/nixpkgs/pkgs/servers/mail/dovecot/default.nix @@ -1,16 +1,17 @@ { stdenv, lib, fetchurl, perl, pkg-config, systemd, openssl -, bzip2, zlib, lz4, inotify-tools, pam, libcap +, bzip2, zlib, lz4, inotify-tools, pam, libcap, coreutils , clucene_core_2, icu, openldap, libsodium, libstemmer, cyrus_sasl , nixosTests # Auth modules , withMySQL ? false, libmysqlclient , withPgSQL ? false, postgresql , withSQLite ? true, sqlite +, withLua ? false, lua5_3 }: stdenv.mkDerivation rec { pname = "dovecot"; - version = "2.3.14"; + version = "2.3.15"; nativeBuildInputs = [ perl pkg-config ]; buildInputs = @@ -18,17 +19,29 @@ stdenv.mkDerivation rec { ++ lib.optionals (stdenv.isLinux) [ systemd pam libcap inotify-tools ] ++ lib.optional withMySQL libmysqlclient ++ lib.optional withPgSQL postgresql - ++ lib.optional withSQLite sqlite; + ++ lib.optional withSQLite sqlite + ++ lib.optional withLua lua5_3; src = fetchurl { url = "https://dovecot.org/releases/${lib.versions.majorMinor version}/${pname}-${version}.tar.gz"; - sha256 = "0jm3p52z619v7ajh533g2g7d790k82fk0w7ry0zqlm8ymzrxgcy8"; + sha256 = "141manrh54cy8xizr7f8fsa3vdzc2ccfgdz87l9rjylm8mfxvfr1"; }; enableParallelBuilding = true; - preConfigure = '' + postPatch = '' + sed -i -E \ + -e 's!/bin/sh\b!${stdenv.shell}!g' \ + -e 's!([^[:alnum:]/_-])/bin/([[:alnum:]]+)\b!\1${coreutils}/bin/\2!g' \ + -e 's!([^[:alnum:]/_-])(head|sleep|cat)\b!\1${coreutils}/bin/\2!g' \ + src/lib-program-client/test-program-client-local.c + + patchShebangs src/lib-smtp/test-bin/*.sh + sed -i -s -E 's!\bcat\b!${coreutils}/bin/cat!g' src/lib-smtp/test-bin/*.sh + patchShebangs src/config/settings-get.pl + '' + lib.optionalString stdenv.isLinux '' + export systemdsystemunitdir=$out/etc/systemd/system ''; # We need this for sysconfdir, see remark below. @@ -75,17 +88,21 @@ stdenv.mkDerivation rec { "lib_cv_va_copy=yes" "lib_cv___va_copy=yes" "lib_cv_va_val_copy=yes" - ] ++ lib.optional (stdenv.isLinux) "--with-systemdsystemunitdir=$(out)/etc/systemd/system" - ++ lib.optional (stdenv.isDarwin) "--enable-static" + ] ++ lib.optional stdenv.isLinux "--with-systemd" + ++ lib.optional stdenv.isDarwin "--enable-static" ++ lib.optional withMySQL "--with-mysql" ++ lib.optional withPgSQL "--with-pgsql" - ++ lib.optional withSQLite "--with-sqlite"; + ++ lib.optional withSQLite "--with-sqlite" + ++ lib.optional withLua "--with-lua"; - meta = { + doCheck = !stdenv.isDarwin; + + meta = with lib; { homepage = "https://dovecot.org/"; description = "Open source IMAP and POP3 email server written with security primarily in mind"; - maintainers = with lib.maintainers; [ peti fpletz globin ajs124 ]; - platforms = lib.platforms.unix; + license = with licenses; [ mit publicDomain lgpl21Only bsd3 bsdOriginal ]; + maintainers = with maintainers; [ peti fpletz globin ajs124 ]; + platforms = platforms.unix; }; passthru.tests = { opensmtpd-interaction = nixosTests.opensmtpd; diff --git a/third_party/nixpkgs/pkgs/servers/mail/dovecot/plugins/pigeonhole/default.nix b/third_party/nixpkgs/pkgs/servers/mail/dovecot/plugins/pigeonhole/default.nix index 6cdb2ee06f..33c66a46bb 100644 --- a/third_party/nixpkgs/pkgs/servers/mail/dovecot/plugins/pigeonhole/default.nix +++ b/third_party/nixpkgs/pkgs/servers/mail/dovecot/plugins/pigeonhole/default.nix @@ -3,11 +3,11 @@ let dovecotMajorMinor = lib.versions.majorMinor dovecot.version; in stdenv.mkDerivation rec { pname = "dovecot-pigeonhole"; - version = "0.5.14"; + version = "0.5.15"; src = fetchurl { url = "https://pigeonhole.dovecot.org/releases/${dovecotMajorMinor}/dovecot-${dovecotMajorMinor}-pigeonhole-${version}.tar.gz"; - sha256 = "1lmjzz4kd90wbdslacybizd1dks4bhwmrx39lj8b19naldw0zjk8"; + sha256 = "1l2h0p8ddsl3ja2lnwk0mfqplqh8n0iw8k27awd3ak7prr88yjg1"; }; buildInputs = [ dovecot openssl ]; @@ -32,8 +32,8 @@ in stdenv.mkDerivation rec { meta = with lib; { homepage = "http://pigeonhole.dovecot.org/"; description = "A sieve plugin for the Dovecot IMAP server"; - license = licenses.lgpl21; - maintainers = with maintainers; [ globin ]; + license = licenses.lgpl21Only; + maintainers = with maintainers; [ globin ajs124 ]; platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/servers/mail/mailman/default.nix b/third_party/nixpkgs/pkgs/servers/mail/mailman/default.nix index 392239a714..3ef9cafeba 100644 --- a/third_party/nixpkgs/pkgs/servers/mail/mailman/default.nix +++ b/third_party/nixpkgs/pkgs/servers/mail/mailman/default.nix @@ -22,11 +22,11 @@ buildPythonPackage rec { patches = [ (fetchpatch { - url = https://gitlab.com/mailman/mailman/-/commit/4b206e2a5267a0e17f345fd7b2d957122ba57566.patch; + url = "https://gitlab.com/mailman/mailman/-/commit/4b206e2a5267a0e17f345fd7b2d957122ba57566.patch"; sha256 = "06axmrn74p81wvcki36c7gfj5fp5q15zxz2yl3lrvijic7hbs4n2"; }) (fetchpatch { - url = https://gitlab.com/mailman/mailman/-/commit/9613154f3c04fa2383fbf017031ef263c291418d.patch; + url = "https://gitlab.com/mailman/mailman/-/commit/9613154f3c04fa2383fbf017031ef263c291418d.patch"; sha256 = "0vyw87s857vfxbf7kihwb6w094xyxmxbi1bpdqi3ybjamjycp55r"; }) ./log-stderr.patch diff --git a/third_party/nixpkgs/pkgs/servers/mail/postfix/default.nix b/third_party/nixpkgs/pkgs/servers/mail/postfix/default.nix index ad704ca792..2fddaae47b 100644 --- a/third_party/nixpkgs/pkgs/servers/mail/postfix/default.nix +++ b/third_party/nixpkgs/pkgs/servers/mail/postfix/default.nix @@ -26,11 +26,11 @@ in stdenv.mkDerivation rec { pname = "postfix"; - version = "3.6.0"; + version = "3.6.1"; src = fetchurl { url = "ftp://ftp.cs.uu.nl/mirror/postfix/postfix-release/official/${pname}-${version}.tar.gz"; - sha256 = "sha256-d0YolNdnHWPL5fwnM/lBCIUVptZxCLnxgIt9rjfoPC4="; + sha256 = "sha256-IKgFYlYB57lZiSIIMsj6FM43TwcR2gVBiPjOxqkv1xw="; }; nativeBuildInputs = [ makeWrapper m4 ]; diff --git a/third_party/nixpkgs/pkgs/servers/mastodon/gemset.nix b/third_party/nixpkgs/pkgs/servers/mastodon/gemset.nix index 20ae2a8f5c..ea59f73b88 100644 --- a/third_party/nixpkgs/pkgs/servers/mastodon/gemset.nix +++ b/third_party/nixpkgs/pkgs/servers/mastodon/gemset.nix @@ -230,10 +230,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0dsmmsk913b50rs4ihk8pafc1gp1i1k1fnbf63ki0j5xdknpli55"; + sha256 = "0fs3fy6k4wmzh0z6c4rl313f5px81pj0viqxj1prksza4j7iymmi"; type = "gem"; }; - version = "1.452.0"; + version = "1.465.0"; }; aws-sdk-core = { dependencies = ["aws-eventstream" "aws-partitions" "aws-sigv4" "jmespath"]; @@ -263,10 +263,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0803g2c1hhdk6fbliww12in4czsxj47fip9dpl35hbqsnrpjc4y9"; + sha256 = "0mm96blh0515lymkwamcnv5jih36v0yykcqx4fr0wwvwmyh637zv"; type = "gem"; }; - version = "1.94.1"; + version = "1.95.1"; }; aws-sigv4 = { dependencies = ["aws-eventstream"]; @@ -875,10 +875,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0z3d4y6xg8prn3zdjw1qpqrnziq1d3zigqil4sxjj0pbr46gc1d6"; + sha256 = "1hwir9b9zy0asy0vap7zfqv75lbws4a1pmh74lhqd2rndv32vfc5"; type = "gem"; }; - version = "2.17.0"; + version = "2.18.0"; }; faraday = { dependencies = ["faraday-net_http" "multipart-post" "ruby2_keywords"]; @@ -1170,10 +1170,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1mq67if5lq388raxa5rh43z6g5zlqh9yixcja4s81p9dzrsj4i3x"; + sha256 = "1dr7cj8km01kjsiwrx7n3qxr264ga13ll15s4h9dbbyj5m8kxqd2"; type = "gem"; }; - version = "1.4.3"; + version = "1.5.0"; }; i18n = { dependencies = ["concurrent-ruby"]; @@ -1524,14 +1524,15 @@ version = "1.0.3"; }; mini_portile2 = { + dependencies = ["net-ftp"]; groups = ["default" "development" "pam_authentication" "production" "test"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0xg1x4708a4pn2wk8qs2d8kfzzdyv9kjjachg2f1phsx62ap2rx2"; + sha256 = "0a2y04km3aciybk12yimkqn0ycrzy23iygl116n7addix9xdii3s"; type = "gem"; }; - version = "2.5.1"; + version = "2.5.2"; }; minitest = { groups = ["default" "development" "pam_authentication" "production" "test"]; @@ -1573,6 +1574,17 @@ }; version = "2.1.1"; }; + net-ftp = { + dependencies = ["net-protocol" "time"]; + groups = ["default" "development" "pam_authentication" "production" "test"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1gx09b00k454fgn7q41r9xs5j5v9qj8xhfxnm650cns1ywcmzkil"; + type = "gem"; + }; + version = "0.1.2"; + }; net-ldap = { groups = ["default"]; platforms = []; @@ -1583,6 +1595,16 @@ }; version = "0.17.0"; }; + net-protocol = { + groups = ["default" "development" "pam_authentication" "production" "test"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "01wxv9sl2lcf5212vqzblw9k241ga54cppi4dk5y9ylhllbqag8a"; + type = "gem"; + }; + version = "0.1.0"; + }; net-scp = { dependencies = ["net-ssh"]; groups = ["default" "development"]; @@ -1620,10 +1642,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "19d78mdg2lbz9jb4ph6nk783c9jbsdm8rnllwhga6pd53xffp6x0"; + sha256 = "1z4x366icbl9w13pk50vxx5kywlksvhxqxrpv8f5xpjxfl3jl64z"; type = "gem"; }; - version = "1.11.3"; + version = "1.11.6"; }; nokogumbo = { dependencies = ["nokogiri"]; @@ -1927,10 +1949,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1q34mqihyg7i46z0pbbkyw58fwmkq7a7315apaqmj41zp6akyjf1"; + sha256 = "0lmaq05a257m9588a81wql3a5p039f221f0dmq57bm2qjwxydjmj"; type = "gem"; }; - version = "5.3.0"; + version = "5.3.2"; }; pundit = { dependencies = ["activesupport"]; @@ -2332,10 +2354,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0chjr6i0g7frbp7dhi4d83ppf7akkdaw7mcgcwbxd6a9mairafpp"; + sha256 = "1xhay8qn3p5f3g6x8i6zh372zk5w2wjrv9dksysxal1r5brkly1w"; type = "gem"; }; - version = "1.14.0"; + version = "1.15.0"; }; rubocop-ast = { dependencies = ["parser"]; @@ -2493,10 +2515,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0dzwz30gr2mjdr70gnz2mmplhfqldz0jhdw1n3ric0y3yj81m02d"; + sha256 = "1m8l8mwvbf6cdd7jqy0l6cg2zxi1qs8ya78jail8pvi4ay7hglm1"; type = "gem"; }; - version = "7.0.9"; + version = "7.0.11"; }; simple-navigation = { dependencies = ["activesupport"]; @@ -2504,10 +2526,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0pkj5z48k90v9v53gckl1b0jsix08kpl6qkgsd4pkc7cva8dbqid"; + sha256 = "0izbisjc4ng77v79x6jv1z3a8fkpdb5isgjcrx60d8vl743x7hab"; type = "gem"; }; - version = "4.1.0"; + version = "4.3.0"; }; simple_form = { dependencies = ["actionpack" "activemodel"]; @@ -2688,6 +2710,16 @@ }; version = "2.0.10"; }; + time = { + groups = ["default" "development" "pam_authentication" "production" "test"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1ayfwm8b0c6n0z34vwfpmy83lf1gd0mq7jbybzarkqp2ylmdlzvy"; + type = "gem"; + }; + version = "0.1.0"; + }; tpm-key_attestation = { dependencies = ["bindata" "openssl-signature_algorithm"]; groups = ["default"]; @@ -2853,10 +2885,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "038igpmkpmn0nw0k7s4db8x88af1nwcy7wzh9m9c9q4p74h7rii0"; + sha256 = "0zd5aid4ya47xlfsaf1mlf83vkyljpnsvgwqhchf0cs7353kdss9"; type = "gem"; }; - version = "3.12.2"; + version = "3.13.0"; }; webpacker = { dependencies = ["activesupport" "rack-proxy" "railties" "semantic_range"]; @@ -2864,10 +2896,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0xpjdbcnsapk9y1hbryxan3a0yks37j59l3ifpmlfrqfxp08anvr"; + sha256 = "0bs6m6annfb2pazb5wb2l3lbnkaa4438ixldnamlx9hg7z3j646h"; type = "gem"; }; - version = "5.3.0"; + version = "5.4.0"; }; webpush = { dependencies = ["hkdf" "jwt"]; diff --git a/third_party/nixpkgs/pkgs/servers/mastodon/package.json b/third_party/nixpkgs/pkgs/servers/mastodon/package.json index be41b4d592..7d54000790 100644 --- a/third_party/nixpkgs/pkgs/servers/mastodon/package.json +++ b/third_party/nixpkgs/pkgs/servers/mastodon/package.json @@ -1,5 +1,5 @@ { - "version": "3.4.0", + "version": "3.4.1", "name": "@tootsuite/mastodon", "license": "AGPL-3.0-or-later", "engines": { @@ -60,11 +60,11 @@ }, "private": true, "dependencies": { - "@babel/core": "^7.14.0", - "@babel/plugin-proposal-decorators": "^7.13.15", + "@babel/core": "^7.14.3", + "@babel/plugin-proposal-decorators": "^7.14.2", "@babel/plugin-transform-react-inline-elements": "^7.12.13", - "@babel/plugin-transform-runtime": "^7.13.15", - "@babel/preset-env": "^7.14.1", + "@babel/plugin-transform-runtime": "^7.14.3", + "@babel/preset-env": "^7.14.4", "@babel/preset-react": "^7.13.13", "@babel/runtime": "^7.14.0", "@gamestdio/websocket": "^0.3.2", @@ -85,11 +85,11 @@ "color-blend": "^3.0.1", "compression-webpack-plugin": "^6.1.1", "cross-env": "^7.0.3", - "css-loader": "^5.2.4", + "css-loader": "^5.2.6", "cssnano": "^4.1.11", "detect-passive-events": "^2.0.3", - "dotenv": "^9.0.1", - "emoji-mart": "Gargron/emoji-mart#build", + "dotenv": "^9.0.2", + "emoji-mart": "^3.0.1", "es6-symbol": "^3.1.3", "escape-html": "^1.0.3", "exif-js": "^2.3.0", @@ -138,9 +138,9 @@ "react-redux-loading-bar": "^4.0.8", "react-router-dom": "^4.1.1", "react-router-scroll-4": "^1.0.0-beta.1", - "react-select": "^4.3.0", + "react-select": "^4.3.1", "react-sparklines": "^1.7.0", - "react-swipeable-views": "^0.13.9", + "react-swipeable-views": "^0.14.0", "react-textarea-autosize": "^8.3.2", "react-toggle": "^4.1.2", "redis": "^3.1.2", @@ -152,8 +152,8 @@ "requestidlecallback": "^0.3.0", "reselect": "^4.0.0", "rimraf": "^3.0.2", - "sass": "^1.32.12", - "sass-loader": "^10.1.1", + "sass": "^1.34.0", + "sass-loader": "^10.2.0", "stacktrace-js": "^2.0.2", "stringz": "^2.1.0", "substring-trie": "^1.0.2", @@ -165,23 +165,23 @@ "uuid": "^8.3.1", "webpack": "^4.46.0", "webpack-assets-manifest": "^4.0.6", - "webpack-bundle-analyzer": "^4.4.1", + "webpack-bundle-analyzer": "^4.4.2", "webpack-cli": "^3.3.12", "webpack-merge": "^5.7.3", "wicg-inert": "^3.1.1", - "ws": "^7.4.5", + "ws": "^7.4.6", "kind-of": "^6.0.3" }, "devDependencies": { "@testing-library/jest-dom": "^5.12.0", - "@testing-library/react": "^11.2.6", + "@testing-library/react": "^11.2.7", "babel-eslint": "^10.1.0", - "babel-jest": "^26.6.3", - "eslint": "^7.26.0", - "eslint-plugin-import": "~2.22.1", + "babel-jest": "^27.0.2", + "eslint": "^7.27.0", + "eslint-plugin-import": "~2.23.4", "eslint-plugin-jsx-a11y": "~6.4.1", "eslint-plugin-promise": "~5.1.0", - "eslint-plugin-react": "~7.23.2", + "eslint-plugin-react": "~7.24.0", "jest": "^26.6.3", "raf": "^3.4.1", "react-intl-translations-manager": "^5.0.3", diff --git a/third_party/nixpkgs/pkgs/servers/mastodon/resolutions.patch b/third_party/nixpkgs/pkgs/servers/mastodon/resolutions.patch index 4160647123..f1f30725f1 100644 --- a/third_party/nixpkgs/pkgs/servers/mastodon/resolutions.patch +++ b/third_party/nixpkgs/pkgs/servers/mastodon/resolutions.patch @@ -1,13 +1,13 @@ diff --git a/package.json b/package.json -index 5bc1f6bf3..8cc22a403 100644 +index f485b1370..ce8e42699 100644 --- a/package.json +++ b/package.json @@ -168,7 +168,8 @@ "webpack-cli": "^3.3.12", "webpack-merge": "^5.7.3", "wicg-inert": "^3.1.1", -- "ws": "^7.4.5" -+ "ws": "^7.4.5", +- "ws": "^7.4.6" ++ "ws": "^7.4.6", + "kind-of": "^6.0.3" }, "devDependencies": { @@ -23,12 +23,12 @@ index 5bc1f6bf3..8cc22a403 100644 "bufferutil": "^4.0.3", "utf-8-validate": "^5.0.5" diff --git a/yarn.lock b/yarn.lock -index 6c8bcf549..bda3adbe8 100644 +index b8ea0f369..32e929c0d 100644 --- a/yarn.lock +++ b/yarn.lock -@@ -5833,6 +5833,11 @@ is-binary-path@~2.1.0: +@@ -5939,6 +5939,11 @@ is-boolean-object@^1.1.0: dependencies: - binary-extensions "^2.0.0" + call-bind "^1.0.2" +is-buffer@^1.1.5: + version "1.1.6" @@ -38,7 +38,7 @@ index 6c8bcf549..bda3adbe8 100644 is-callable@^1.1.4, is-callable@^1.2.2: version "1.2.2" resolved "https://registry.yarnpkg.com/is-callable/-/is-callable-1.2.2.tgz#c7c6715cd22d4ddb48d3e19970223aceabb080d9" -@@ -6769,7 +6774,26 @@ killable@^1.0.1: +@@ -6971,7 +6976,26 @@ killable@^1.0.1: resolved "https://registry.yarnpkg.com/killable/-/killable-1.0.1.tgz#4c8ce441187a061c7474fb87ca08e2a638194892" integrity sha512-LzqtLKlUwirEUyl/nicirVmNiPvYs7l5n8wOPP7fyJVpUPkvCnW/vuiXGpylGUlnPDnB7311rARzAt3Mhswpjg== diff --git a/third_party/nixpkgs/pkgs/servers/mastodon/source.nix b/third_party/nixpkgs/pkgs/servers/mastodon/source.nix index e7e8135bef..be64ff2315 100644 --- a/third_party/nixpkgs/pkgs/servers/mastodon/source.nix +++ b/third_party/nixpkgs/pkgs/servers/mastodon/source.nix @@ -2,8 +2,8 @@ { fetchgit, applyPatches }: let src = fetchgit { url = "https://github.com/tootsuite/mastodon.git"; - rev = "v3.4.0"; - sha256 = "0wa1j4iin6nlb1p5lxzgldzgr0vhrmm835gj2zqadw37vpsxdis3"; + rev = "v3.4.1"; + sha256 = "1pg3yh6gfzwrhzm35s6ydpny4fj117z2avi4rck5d7n20j8s2hf5"; }; in applyPatches { inherit src; diff --git a/third_party/nixpkgs/pkgs/servers/mastodon/version.nix b/third_party/nixpkgs/pkgs/servers/mastodon/version.nix index 9aa1e18718..4ccfa7d8eb 100644 --- a/third_party/nixpkgs/pkgs/servers/mastodon/version.nix +++ b/third_party/nixpkgs/pkgs/servers/mastodon/version.nix @@ -1 +1 @@ -"3.4.0" +"3.4.1" diff --git a/third_party/nixpkgs/pkgs/servers/mastodon/version.patch b/third_party/nixpkgs/pkgs/servers/mastodon/version.patch index eb0bd39373..08bc2f827a 100644 --- a/third_party/nixpkgs/pkgs/servers/mastodon/version.patch +++ b/third_party/nixpkgs/pkgs/servers/mastodon/version.patch @@ -3,7 +3,7 @@ diff -Naur --label a/package.json --label b/package.json a/package.json b/packag +++ b/package.json @@ -1,4 +1,5 @@ { -+ "version": "3.4.0", ++ "version": "3.4.1", "name": "@tootsuite/mastodon", "license": "AGPL-3.0-or-later", "engines": { diff --git a/third_party/nixpkgs/pkgs/servers/mastodon/yarn.nix b/third_party/nixpkgs/pkgs/servers/mastodon/yarn.nix index 9d22eb6bd5..01aa11cfca 100644 --- a/third_party/nixpkgs/pkgs/servers/mastodon/yarn.nix +++ b/third_party/nixpkgs/pkgs/servers/mastodon/yarn.nix @@ -18,27 +18,27 @@ }; } { - name = "_babel_compat_data___compat_data_7.14.0.tgz"; + name = "_babel_compat_data___compat_data_7.14.4.tgz"; path = fetchurl { - name = "_babel_compat_data___compat_data_7.14.0.tgz"; - url = "https://registry.yarnpkg.com/@babel/compat-data/-/compat-data-7.14.0.tgz"; - sha1 = "a901128bce2ad02565df95e6ecbf195cf9465919"; + name = "_babel_compat_data___compat_data_7.14.4.tgz"; + url = "https://registry.yarnpkg.com/@babel/compat-data/-/compat-data-7.14.4.tgz"; + sha1 = "45720fe0cecf3fd42019e1d12cc3d27fadc98d58"; }; } { - name = "_babel_core___core_7.14.0.tgz"; + name = "_babel_core___core_7.14.3.tgz"; path = fetchurl { - name = "_babel_core___core_7.14.0.tgz"; - url = "https://registry.yarnpkg.com/@babel/core/-/core-7.14.0.tgz"; - sha1 = "47299ff3ec8d111b493f1a9d04bf88c04e728d88"; + name = "_babel_core___core_7.14.3.tgz"; + url = "https://registry.yarnpkg.com/@babel/core/-/core-7.14.3.tgz"; + sha1 = "5395e30405f0776067fbd9cf0884f15bfb770a38"; }; } { - name = "_babel_generator___generator_7.14.0.tgz"; + name = "_babel_generator___generator_7.14.3.tgz"; path = fetchurl { - name = "_babel_generator___generator_7.14.0.tgz"; - url = "https://registry.yarnpkg.com/@babel/generator/-/generator-7.14.0.tgz"; - sha1 = "0f35d663506c43e4f10898fbda0d752ec75494be"; + name = "_babel_generator___generator_7.14.3.tgz"; + url = "https://registry.yarnpkg.com/@babel/generator/-/generator-7.14.3.tgz"; + sha1 = "0c2652d91f7bddab7cccc6ba8157e4f40dcedb91"; }; } { @@ -74,27 +74,27 @@ }; } { - name = "_babel_helper_compilation_targets___helper_compilation_targets_7.13.16.tgz"; + name = "_babel_helper_compilation_targets___helper_compilation_targets_7.14.4.tgz"; path = fetchurl { - name = "_babel_helper_compilation_targets___helper_compilation_targets_7.13.16.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-compilation-targets/-/helper-compilation-targets-7.13.16.tgz"; - sha1 = "6e91dccf15e3f43e5556dffe32d860109887563c"; + name = "_babel_helper_compilation_targets___helper_compilation_targets_7.14.4.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-compilation-targets/-/helper-compilation-targets-7.14.4.tgz"; + sha1 = "33ebd0ffc34248051ee2089350a929ab02f2a516"; }; } { - name = "_babel_helper_create_class_features_plugin___helper_create_class_features_plugin_7.13.11.tgz"; + name = "_babel_helper_create_class_features_plugin___helper_create_class_features_plugin_7.14.3.tgz"; path = fetchurl { - name = "_babel_helper_create_class_features_plugin___helper_create_class_features_plugin_7.13.11.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-create-class-features-plugin/-/helper-create-class-features-plugin-7.13.11.tgz"; - sha1 = "30d30a005bca2c953f5653fc25091a492177f4f6"; + name = "_babel_helper_create_class_features_plugin___helper_create_class_features_plugin_7.14.3.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-create-class-features-plugin/-/helper-create-class-features-plugin-7.14.3.tgz"; + sha1 = "832111bcf4f57ca57a4c5b1a000fc125abc6554a"; }; } { - name = "_babel_helper_create_class_features_plugin___helper_create_class_features_plugin_7.14.0.tgz"; + name = "_babel_helper_create_class_features_plugin___helper_create_class_features_plugin_7.14.4.tgz"; path = fetchurl { - name = "_babel_helper_create_class_features_plugin___helper_create_class_features_plugin_7.14.0.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-create-class-features-plugin/-/helper-create-class-features-plugin-7.14.0.tgz"; - sha1 = "38367d3dab125b12f94273de418f4df23a11a15e"; + name = "_babel_helper_create_class_features_plugin___helper_create_class_features_plugin_7.14.4.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-create-class-features-plugin/-/helper-create-class-features-plugin-7.14.4.tgz"; + sha1 = "abf888d836a441abee783c75229279748705dc42"; }; } { @@ -129,6 +129,14 @@ sha1 = "93ad656db3c3c2232559fd7b2c3dbdcbe0eb377a"; }; } + { + name = "_babel_helper_function_name___helper_function_name_7.14.2.tgz"; + path = fetchurl { + name = "_babel_helper_function_name___helper_function_name_7.14.2.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-function-name/-/helper-function-name-7.14.2.tgz"; + sha1 = "397688b590760b6ef7725b5f0860c82427ebaac2"; + }; + } { name = "_babel_helper_get_function_arity___helper_get_function_arity_7.12.13.tgz"; path = fetchurl { @@ -153,14 +161,6 @@ sha1 = "c5715695b4f8bab32660dbdcdc2341dec7e3df40"; }; } - { - name = "_babel_helper_member_expression_to_functions___helper_member_expression_to_functions_7.13.0.tgz"; - path = fetchurl { - name = "_babel_helper_member_expression_to_functions___helper_member_expression_to_functions_7.13.0.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-member-expression-to-functions/-/helper-member-expression-to-functions-7.13.0.tgz"; - sha1 = "6aa4bb678e0f8c22f58cdb79451d30494461b091"; - }; - } { name = "_babel_helper_member_expression_to_functions___helper_member_expression_to_functions_7.13.12.tgz"; path = fetchurl { @@ -178,11 +178,11 @@ }; } { - name = "_babel_helper_module_transforms___helper_module_transforms_7.14.0.tgz"; + name = "_babel_helper_module_transforms___helper_module_transforms_7.14.2.tgz"; path = fetchurl { - name = "_babel_helper_module_transforms___helper_module_transforms_7.14.0.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-module-transforms/-/helper-module-transforms-7.14.0.tgz"; - sha1 = "8fcf78be220156f22633ee204ea81f73f826a8ad"; + name = "_babel_helper_module_transforms___helper_module_transforms_7.14.2.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-module-transforms/-/helper-module-transforms-7.14.2.tgz"; + sha1 = "ac1cc30ee47b945e3e0c4db12fa0c5389509dfe5"; }; } { @@ -217,14 +217,6 @@ sha1 = "00ec4fb6862546bd3d0aff9aac56074277173121"; }; } - { - name = "_babel_helper_replace_supers___helper_replace_supers_7.13.0.tgz"; - path = fetchurl { - name = "_babel_helper_replace_supers___helper_replace_supers_7.13.0.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-replace-supers/-/helper-replace-supers-7.13.0.tgz"; - sha1 = "6034b7b51943094cb41627848cb219cb02be1d24"; - }; - } { name = "_babel_helper_replace_supers___helper_replace_supers_7.13.12.tgz"; path = fetchurl { @@ -233,6 +225,22 @@ sha1 = "6442f4c1ad912502481a564a7386de0c77ff3804"; }; } + { + name = "_babel_helper_replace_supers___helper_replace_supers_7.14.3.tgz"; + path = fetchurl { + name = "_babel_helper_replace_supers___helper_replace_supers_7.14.3.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-replace-supers/-/helper-replace-supers-7.14.3.tgz"; + sha1 = "ca17b318b859d107f0e9b722d58cf12d94436600"; + }; + } + { + name = "_babel_helper_replace_supers___helper_replace_supers_7.14.4.tgz"; + path = fetchurl { + name = "_babel_helper_replace_supers___helper_replace_supers_7.14.4.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-replace-supers/-/helper-replace-supers-7.14.4.tgz"; + sha1 = "b2ab16875deecfff3ddfcd539bc315f72998d836"; + }; + } { name = "_babel_helper_simple_access___helper_simple_access_7.13.12.tgz"; path = fetchurl { @@ -306,11 +314,11 @@ }; } { - name = "_babel_parser___parser_7.14.0.tgz"; + name = "_babel_parser___parser_7.14.3.tgz"; path = fetchurl { - name = "_babel_parser___parser_7.14.0.tgz"; - url = "https://registry.yarnpkg.com/@babel/parser/-/parser-7.14.0.tgz"; - sha1 = "2f0ebfed92bcddcc8395b91f1895191ce2760380"; + name = "_babel_parser___parser_7.14.3.tgz"; + url = "https://registry.yarnpkg.com/@babel/parser/-/parser-7.14.3.tgz"; + sha1 = "9b530eecb071fd0c93519df25c5ff9f14759f298"; }; } { @@ -322,11 +330,11 @@ }; } { - name = "_babel_plugin_proposal_async_generator_functions___plugin_proposal_async_generator_functions_7.13.15.tgz"; + name = "_babel_plugin_proposal_async_generator_functions___plugin_proposal_async_generator_functions_7.14.2.tgz"; path = fetchurl { - name = "_babel_plugin_proposal_async_generator_functions___plugin_proposal_async_generator_functions_7.13.15.tgz"; - url = "https://registry.yarnpkg.com/@babel/plugin-proposal-async-generator-functions/-/plugin-proposal-async-generator-functions-7.13.15.tgz"; - sha1 = "80e549df273a3b3050431b148c892491df1bcc5b"; + name = "_babel_plugin_proposal_async_generator_functions___plugin_proposal_async_generator_functions_7.14.2.tgz"; + url = "https://registry.yarnpkg.com/@babel/plugin-proposal-async-generator-functions/-/plugin-proposal-async-generator-functions-7.14.2.tgz"; + sha1 = "3a2085abbf5d5f962d480dbc81347385ed62eb1e"; }; } { @@ -338,91 +346,91 @@ }; } { - name = "_babel_plugin_proposal_class_static_block___plugin_proposal_class_static_block_7.13.11.tgz"; + name = "_babel_plugin_proposal_class_static_block___plugin_proposal_class_static_block_7.14.3.tgz"; path = fetchurl { - name = "_babel_plugin_proposal_class_static_block___plugin_proposal_class_static_block_7.13.11.tgz"; - url = "https://registry.yarnpkg.com/@babel/plugin-proposal-class-static-block/-/plugin-proposal-class-static-block-7.13.11.tgz"; - sha1 = "6fcbba4a962702c17e5371a0c7b39afde186d703"; + name = "_babel_plugin_proposal_class_static_block___plugin_proposal_class_static_block_7.14.3.tgz"; + url = "https://registry.yarnpkg.com/@babel/plugin-proposal-class-static-block/-/plugin-proposal-class-static-block-7.14.3.tgz"; + sha1 = "5a527e2cae4a4753119c3a3e7f64ecae8ccf1360"; }; } { - name = "_babel_plugin_proposal_decorators___plugin_proposal_decorators_7.13.15.tgz"; + name = "_babel_plugin_proposal_decorators___plugin_proposal_decorators_7.14.2.tgz"; path = fetchurl { - name = "_babel_plugin_proposal_decorators___plugin_proposal_decorators_7.13.15.tgz"; - url = "https://registry.yarnpkg.com/@babel/plugin-proposal-decorators/-/plugin-proposal-decorators-7.13.15.tgz"; - sha1 = "e91ccfef2dc24dd5bd5dcc9fc9e2557c684ecfb8"; + name = "_babel_plugin_proposal_decorators___plugin_proposal_decorators_7.14.2.tgz"; + url = "https://registry.yarnpkg.com/@babel/plugin-proposal-decorators/-/plugin-proposal-decorators-7.14.2.tgz"; + sha1 = "e68c3c5e4a6a08834456568256fc3e71b93590cf"; }; } { - name = "_babel_plugin_proposal_dynamic_import___plugin_proposal_dynamic_import_7.13.8.tgz"; + name = 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"caniuse_lite___caniuse_lite_1.0.30001228.tgz"; + url = "https://registry.yarnpkg.com/caniuse-lite/-/caniuse-lite-1.0.30001228.tgz"; + sha1 = "bfdc5942cd3326fa51ee0b42fbef4da9d492a7fa"; }; } { @@ -2953,6 +2985,14 @@ sha1 = "67a9e964be31a51e15e5010d58e6f12834002f46"; }; } + { + name = "ci_info___ci_info_3.2.0.tgz"; + path = fetchurl { + name = "ci_info___ci_info_3.2.0.tgz"; + url = "https://registry.yarnpkg.com/ci-info/-/ci-info-3.2.0.tgz"; + sha1 = "2876cb948a498797b5236f0095bc057d0dca38b6"; + }; + } { name = "cipher_base___cipher_base_1.0.4.tgz"; path = fetchurl { @@ -3145,14 +3185,6 @@ sha1 = "68148e7f85d41ad7649c5fa8c8106f098d229e10"; }; } - { - name = "colorette___colorette_1.2.1.tgz"; - path = fetchurl { - name = "colorette___colorette_1.2.1.tgz"; - url = "https://registry.yarnpkg.com/colorette/-/colorette-1.2.1.tgz"; - sha1 = "4d0b921325c14faf92633086a536db6e89564b1b"; - }; - } { name = "colorette___colorette_1.2.2.tgz"; path = fetchurl { @@ -3273,14 +3305,6 @@ sha1 = "c20b96d8c617748aaf1c16021760cd27fcb8cb75"; }; } - { - name = "contains_path___contains_path_0.1.0.tgz"; - path = fetchurl { - name = "contains_path___contains_path_0.1.0.tgz"; - url = "https://registry.yarnpkg.com/contains-path/-/contains-path-0.1.0.tgz"; - sha1 = "fe8cf184ff6670b6baef01a9d4861a5cbec4120a"; - }; - } { name = "content_disposition___content_disposition_0.5.3.tgz"; path = fetchurl { @@ -3514,11 +3538,11 @@ }; } { - name = "css_loader___css_loader_5.2.4.tgz"; + name = "css_loader___css_loader_5.2.6.tgz"; path = fetchurl { - name = "css_loader___css_loader_5.2.4.tgz"; - url = "https://registry.yarnpkg.com/css-loader/-/css-loader-5.2.4.tgz"; - sha1 = "e985dcbce339812cb6104ef3670f08f9893a1536"; + name = "css_loader___css_loader_5.2.6.tgz"; + url = "https://registry.yarnpkg.com/css-loader/-/css-loader-5.2.6.tgz"; + sha1 = "c3c82ab77fea1f360e587d871a6811f4450cc8d1"; }; } { @@ -3978,11 +4002,11 @@ }; } { - name = "dns_packet___dns_packet_1.3.1.tgz"; + name = "dns_packet___dns_packet_1.3.4.tgz"; path = fetchurl { - name = "dns_packet___dns_packet_1.3.1.tgz"; - url = "https://registry.yarnpkg.com/dns-packet/-/dns-packet-1.3.1.tgz"; - sha1 = "12aa426981075be500b910eedcd0b47dd7deda5a"; + name = "dns_packet___dns_packet_1.3.4.tgz"; + url = "https://registry.yarnpkg.com/dns-packet/-/dns-packet-1.3.4.tgz"; + sha1 = "e3455065824a2507ba886c55a89963bb107dec6f"; }; } { @@ -4098,11 +4122,11 @@ }; } { - name = "dotenv___dotenv_9.0.1.tgz"; + name = "dotenv___dotenv_9.0.2.tgz"; path = fetchurl { - name = "dotenv___dotenv_9.0.1.tgz"; - url = "https://registry.yarnpkg.com/dotenv/-/dotenv-9.0.1.tgz"; - sha1 = "a889a28a3a515812dde1e7f8183ef5cdf3186b97"; + name = "dotenv___dotenv_9.0.2.tgz"; + url = "https://registry.yarnpkg.com/dotenv/-/dotenv-9.0.2.tgz"; + sha1 = "dacc20160935a37dea6364aa1bef819fb9b6ab05"; }; } { @@ -4146,27 +4170,11 @@ }; } { - name = "electron_to_chromium___electron_to_chromium_1.3.574.tgz"; + name = "electron_to_chromium___electron_to_chromium_1.3.736.tgz"; path = fetchurl { - name = "electron_to_chromium___electron_to_chromium_1.3.574.tgz"; - url = "https://registry.yarnpkg.com/electron-to-chromium/-/electron-to-chromium-1.3.574.tgz"; - sha1 = "bdd87f62fe70165e5c862a0acf0cee9889e23aa3"; - }; - } - { - name = "electron_to_chromium___electron_to_chromium_1.3.603.tgz"; - path = fetchurl { - name = "electron_to_chromium___electron_to_chromium_1.3.603.tgz"; - url = "https://registry.yarnpkg.com/electron-to-chromium/-/electron-to-chromium-1.3.603.tgz"; - sha1 = "1b71bec27fb940eccd79245f6824c63d5f7e8abf"; - }; - } - { - name = "electron_to_chromium___electron_to_chromium_1.3.672.tgz"; - path = fetchurl { - name = "electron_to_chromium___electron_to_chromium_1.3.672.tgz"; - url = "https://registry.yarnpkg.com/electron-to-chromium/-/electron-to-chromium-1.3.672.tgz"; - sha1 = "3a6e335016dab4bc584d5292adc4f98f54541f6a"; + name = "electron_to_chromium___electron_to_chromium_1.3.736.tgz"; + url = "https://registry.yarnpkg.com/electron-to-chromium/-/electron-to-chromium-1.3.736.tgz"; + sha1 = "f632d900a1f788dab22fec9c62ec5c9c8f0c4052"; }; } { @@ -4186,11 +4194,11 @@ }; } { - name = "934f314fd8322276765066e8a2a6be5bac61b1cf"; + name = "emoji_mart___emoji_mart_3.0.1.tgz"; path = fetchurl { - name = "934f314fd8322276765066e8a2a6be5bac61b1cf"; - url = "https://codeload.github.com/Gargron/emoji-mart/tar.gz/934f314fd8322276765066e8a2a6be5bac61b1cf"; - sha1 = "1768aa6ab3d6b926f457e082bd4ed7279f6fc9cf"; + name = "emoji_mart___emoji_mart_3.0.1.tgz"; + url = "https://registry.yarnpkg.com/emoji-mart/-/emoji-mart-3.0.1.tgz"; + sha1 = "9ce86706e02aea0506345f98464814a662ca54c6"; }; } { @@ -4313,6 +4321,14 @@ sha1 = "088101a55f0541f595e7e057199e27ddc8f3a5c2"; }; } + { + name = "es_abstract___es_abstract_1.18.3.tgz"; + path = fetchurl { + name = "es_abstract___es_abstract_1.18.3.tgz"; + url = "https://registry.yarnpkg.com/es-abstract/-/es-abstract-1.18.3.tgz"; + sha1 = "25c4c3380a27aa203c44b2b685bba94da31b63e0"; + }; + } { name = "es_to_primitive___es_to_primitive_1.2.1.tgz"; path = fetchurl { @@ -4409,6 +4425,14 @@ sha1 = "a30304e99daa32e23b2fd20f51babd07cffca344"; }; } + { + name = "escape_string_regexp___escape_string_regexp_4.0.0.tgz"; + path = fetchurl { + name = "escape_string_regexp___escape_string_regexp_4.0.0.tgz"; + url = "https://registry.yarnpkg.com/escape-string-regexp/-/escape-string-regexp-4.0.0.tgz"; + sha1 = "14ba83a5d373e3d311e5afca29cf5bfad965bf34"; + }; + } { name = "escodegen___escodegen_1.14.3.tgz"; path = fetchurl { @@ -4434,19 +4458,19 @@ }; } { - name = "eslint_module_utils___eslint_module_utils_2.6.0.tgz"; + name = "eslint_module_utils___eslint_module_utils_2.6.1.tgz"; path = fetchurl { - name = "eslint_module_utils___eslint_module_utils_2.6.0.tgz"; - url = "https://registry.yarnpkg.com/eslint-module-utils/-/eslint-module-utils-2.6.0.tgz"; - sha1 = "579ebd094f56af7797d19c9866c9c9486629bfa6"; + name = "eslint_module_utils___eslint_module_utils_2.6.1.tgz"; + url = "https://registry.yarnpkg.com/eslint-module-utils/-/eslint-module-utils-2.6.1.tgz"; + sha1 = "b51be1e473dd0de1c5ea638e22429c2490ea8233"; }; } { - name = "eslint_plugin_import___eslint_plugin_import_2.22.1.tgz"; + name = "eslint_plugin_import___eslint_plugin_import_2.23.4.tgz"; path = fetchurl { - name = "eslint_plugin_import___eslint_plugin_import_2.22.1.tgz"; - url = "https://registry.yarnpkg.com/eslint-plugin-import/-/eslint-plugin-import-2.22.1.tgz"; - sha1 = "0896c7e6a0cf44109a2d97b95903c2bb689d7702"; + name = "eslint_plugin_import___eslint_plugin_import_2.23.4.tgz"; + url = "https://registry.yarnpkg.com/eslint-plugin-import/-/eslint-plugin-import-2.23.4.tgz"; + sha1 = "8dceb1ed6b73e46e50ec9a5bb2411b645e7d3d97"; }; } { @@ -4466,11 +4490,11 @@ }; } { - name = "eslint_plugin_react___eslint_plugin_react_7.23.2.tgz"; + name = "eslint_plugin_react___eslint_plugin_react_7.24.0.tgz"; path = fetchurl { - name = "eslint_plugin_react___eslint_plugin_react_7.23.2.tgz"; - url = "https://registry.yarnpkg.com/eslint-plugin-react/-/eslint-plugin-react-7.23.2.tgz"; - sha1 = "2d2291b0f95c03728b55869f01102290e792d494"; + name = "eslint_plugin_react___eslint_plugin_react_7.24.0.tgz"; + url = "https://registry.yarnpkg.com/eslint-plugin-react/-/eslint-plugin-react-7.24.0.tgz"; + sha1 = "eadedfa351a6f36b490aa17f4fa9b14e842b9eb4"; }; } { @@ -4522,11 +4546,11 @@ }; } { - name = "eslint___eslint_7.26.0.tgz"; + name = "eslint___eslint_7.27.0.tgz"; path = fetchurl { - name = "eslint___eslint_7.26.0.tgz"; - url = "https://registry.yarnpkg.com/eslint/-/eslint-7.26.0.tgz"; - sha1 = "d416fdcdcb3236cd8f282065312813f8c13982f6"; + name = "eslint___eslint_7.27.0.tgz"; + url = "https://registry.yarnpkg.com/eslint/-/eslint-7.27.0.tgz"; + sha1 = "665a1506d8f95655c9274d84bd78f7166b07e9c7"; }; } { @@ -5393,6 +5417,14 @@ sha1 = "34f5049ce1ecdf2b0649af3ef24e45ed35416d91"; }; } + { + name = "has_bigints___has_bigints_1.0.1.tgz"; + path = fetchurl { + name = "has_bigints___has_bigints_1.0.1.tgz"; + url = "https://registry.yarnpkg.com/has-bigints/-/has-bigints-1.0.1.tgz"; + sha1 = "64fe6acb020673e3b78db035a5af69aa9d07b113"; + }; + } { name = "has_flag___has_flag_1.0.0.tgz"; path = fetchurl { @@ -5425,6 +5457,14 @@ sha1 = "9f5214758a44196c406d9bd76cebf81ec2dd31e8"; }; } + { + name = "has_symbols___has_symbols_1.0.2.tgz"; + path = fetchurl { + name = "has_symbols___has_symbols_1.0.2.tgz"; + url = "https://registry.yarnpkg.com/has-symbols/-/has-symbols-1.0.2.tgz"; + sha1 = "165d3070c00309752a1236a479331e3ac56f1423"; + }; + } { name = "has_unicode___has_unicode_2.0.1.tgz"; path = fetchurl { @@ -6073,6 +6113,14 @@ sha1 = "4574a2ae56f7ab206896fb431eaeed066fdf8f03"; }; } + { + name = "is_bigint___is_bigint_1.0.2.tgz"; + path = fetchurl { + name = "is_bigint___is_bigint_1.0.2.tgz"; + url = "https://registry.yarnpkg.com/is-bigint/-/is-bigint-1.0.2.tgz"; + sha1 = "ffb381442503235ad245ea89e45b3dbff040ee5a"; + }; + } { name = "is_binary_path___is_binary_path_1.0.1.tgz"; path = fetchurl { @@ -6089,6 +6137,14 @@ sha1 = "ea1f7f3b80f064236e83470f86c09c254fb45b09"; }; } + { + name = "is_boolean_object___is_boolean_object_1.1.1.tgz"; + path = fetchurl { + name = "is_boolean_object___is_boolean_object_1.1.1.tgz"; + url = "https://registry.yarnpkg.com/is-boolean-object/-/is-boolean-object-1.1.1.tgz"; + sha1 = "3c0878f035cb821228d350d2e1e36719716a3de8"; + }; + } { name = "is_buffer___is_buffer_1.1.6.tgz"; path = fetchurl { @@ -6105,6 +6161,14 @@ sha1 = "c7c6715cd22d4ddb48d3e19970223aceabb080d9"; }; } + { + name = "is_callable___is_callable_1.2.3.tgz"; + path = fetchurl { + name = "is_callable___is_callable_1.2.3.tgz"; + url = "https://registry.yarnpkg.com/is-callable/-/is-callable-1.2.3.tgz"; + sha1 = "8b1e0500b73a1d76c70487636f368e519de8db8e"; + }; + } { name = "is_ci___is_ci_2.0.0.tgz"; path = fetchurl { @@ -6113,6 +6177,14 @@ sha1 = "6bc6334181810e04b5c22b3d589fdca55026404c"; }; } + { + name = "is_ci___is_ci_3.0.0.tgz"; + path = fetchurl { + name = "is_ci___is_ci_3.0.0.tgz"; + url = "https://registry.yarnpkg.com/is-ci/-/is-ci-3.0.0.tgz"; + sha1 = "c7e7be3c9d8eef7d0fa144390bd1e4b88dc4c994"; + }; + } { name = "is_color_stop___is_color_stop_1.1.0.tgz"; path = fetchurl { @@ -6122,11 +6194,11 @@ }; } { - name = "is_core_module___is_core_module_2.2.0.tgz"; + name = "is_core_module___is_core_module_2.4.0.tgz"; path = fetchurl { - name = "is_core_module___is_core_module_2.2.0.tgz"; - url = "https://registry.yarnpkg.com/is-core-module/-/is-core-module-2.2.0.tgz"; - sha1 = "97037ef3d52224d85163f5597b2b63d9afed981a"; + name = "is_core_module___is_core_module_2.4.0.tgz"; + url = "https://registry.yarnpkg.com/is-core-module/-/is-core-module-2.4.0.tgz"; + sha1 = "8e9fc8e15027b011418026e98f0e6f4d86305cc1"; }; } { @@ -6297,6 +6369,14 @@ sha1 = "3de746c18dda2319241a53675908d8f766f11c24"; }; } + { + name = "is_number_object___is_number_object_1.0.5.tgz"; + path = fetchurl { + name = "is_number_object___is_number_object_1.0.5.tgz"; + url = "https://registry.yarnpkg.com/is-number-object/-/is-number-object-1.0.5.tgz"; + sha1 = "6edfaeed7950cff19afedce9fbfca9ee6dd289eb"; + }; + } { name = "is_number___is_number_3.0.0.tgz"; path = fetchurl { @@ -6385,6 +6465,14 @@ sha1 = "c6f98aacc546f6cec5468a07b7b153ab564a57b9"; }; } + { + name = "is_regex___is_regex_1.1.3.tgz"; + path = fetchurl { + name = "is_regex___is_regex_1.1.3.tgz"; + url = "https://registry.yarnpkg.com/is-regex/-/is-regex-1.1.3.tgz"; + sha1 = "d029f9aff6448b93ebbe3f33dac71511fdcbef9f"; + }; + } { name = "is_resolvable___is_resolvable_1.1.0.tgz"; path = fetchurl { @@ -6417,6 +6505,14 @@ sha1 = "40493ed198ef3ff477b8c7f92f644ec82a5cd3a6"; }; } + { + name = "is_string___is_string_1.0.6.tgz"; + path = fetchurl { + name = "is_string___is_string_1.0.6.tgz"; + url = "https://registry.yarnpkg.com/is-string/-/is-string-1.0.6.tgz"; + sha1 = "3fe5d5992fb0d93404f32584d4b0179a71b54a5f"; + }; + } { name = "is_symbol___is_symbol_1.0.3.tgz"; path = fetchurl { @@ -6425,6 +6521,14 @@ sha1 = "38e1014b9e6329be0de9d24a414fd7441ec61937"; }; } + { + name = "is_symbol___is_symbol_1.0.4.tgz"; + path = fetchurl { + name = "is_symbol___is_symbol_1.0.4.tgz"; + url = "https://registry.yarnpkg.com/is-symbol/-/is-symbol-1.0.4.tgz"; + sha1 = "a6dac93b635b063ca6872236de88910a57af139c"; + }; + } { name = "is_typedarray___is_typedarray_1.0.0.tgz"; path = fetchurl { @@ -6649,6 +6753,14 @@ sha1 = "dd7e60fe7dc0e9f911a23d79c5ff7fb5c2cafeaa"; }; } + { + name = "jest_haste_map___jest_haste_map_27.0.2.tgz"; + path = fetchurl { + name = "jest_haste_map___jest_haste_map_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-haste-map/-/jest-haste-map-27.0.2.tgz"; + sha1 = "3f1819400c671237e48b4d4b76a80a0dbed7577f"; + }; + } { name = "jest_jasmine2___jest_jasmine2_26.6.3.tgz"; path = fetchurl { @@ -6705,6 +6817,14 @@ sha1 = "d25e7184b36e39fd466c3bc41be0971e821fee28"; }; } + { + name = "jest_regex_util___jest_regex_util_27.0.1.tgz"; + path = fetchurl { + name = "jest_regex_util___jest_regex_util_27.0.1.tgz"; + url = "https://registry.yarnpkg.com/jest-regex-util/-/jest-regex-util-27.0.1.tgz"; + sha1 = "69d4b1bf5b690faa3490113c47486ed85dd45b68"; + }; + } { name = "jest_resolve_dependencies___jest_resolve_dependencies_26.6.3.tgz"; path = fetchurl { @@ -6745,6 +6865,14 @@ sha1 = "d139aafd46957d3a448f3a6cdabe2919ba0742d1"; }; } + { + name = "jest_serializer___jest_serializer_27.0.1.tgz"; + path = fetchurl { + name = "jest_serializer___jest_serializer_27.0.1.tgz"; + url = "https://registry.yarnpkg.com/jest-serializer/-/jest-serializer-27.0.1.tgz"; + sha1 = "2464d04dcc33fb71dc80b7c82e3c5e8a08cb1020"; + }; + } { name = "jest_snapshot___jest_snapshot_26.6.2.tgz"; path = fetchurl { @@ -6761,6 +6889,14 @@ sha1 = "907535dbe4d5a6cb4c47ac9b926f6af29576cbc1"; }; } + { + name = "jest_util___jest_util_27.0.2.tgz"; + path = fetchurl { + name = "jest_util___jest_util_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-util/-/jest-util-27.0.2.tgz"; + sha1 = "fc2c7ace3c75ae561cf1e5fdb643bf685a5be7c7"; + }; + } { name = "jest_validate___jest_validate_26.6.2.tgz"; path = fetchurl { @@ -6793,6 +6929,14 @@ sha1 = "7f72cbc4d643c365e27b9fd775f9d0eaa9c7a8ed"; }; } + { + name = "jest_worker___jest_worker_27.0.2.tgz"; + path = fetchurl { + name = "jest_worker___jest_worker_27.0.2.tgz"; + url = "https://registry.yarnpkg.com/jest-worker/-/jest-worker-27.0.2.tgz"; + sha1 = "4ebeb56cef48b3e7514552f80d0d80c0129f0b05"; + }; + } { name = "jest___jest_26.6.3.tgz"; path = fetchurl { @@ -6881,6 +7025,14 @@ sha1 = "69f6a87d9513ab8bb8fe63bdb0979c448e684660"; }; } + { + name = "json_schema_traverse___json_schema_traverse_1.0.0.tgz"; + path = fetchurl { + name = "json_schema_traverse___json_schema_traverse_1.0.0.tgz"; + url = "https://registry.yarnpkg.com/json-schema-traverse/-/json-schema-traverse-1.0.0.tgz"; + sha1 = "ae7bcb3656ab77a73ba5c49bf654f38e6b6860e2"; + }; + } { name = "json_schema___json_schema_0.2.3.tgz"; path = fetchurl { @@ -7122,11 +7274,11 @@ }; } { - name = "load_json_file___load_json_file_2.0.0.tgz"; + name = "load_json_file___load_json_file_4.0.0.tgz"; path = fetchurl { - name = "load_json_file___load_json_file_2.0.0.tgz"; - url = "https://registry.yarnpkg.com/load-json-file/-/load-json-file-2.0.0.tgz"; - sha1 = "7947e42149af80d696cbf797bcaabcfe1fe29ca8"; + name = "load_json_file___load_json_file_4.0.0.tgz"; + url = "https://registry.yarnpkg.com/load-json-file/-/load-json-file-4.0.0.tgz"; + sha1 = "2f5f45ab91e33216234fd53adab668eb4ec0993b"; }; } { @@ -7201,6 +7353,14 @@ sha1 = "f826c9b4e2a8511d84e3aca29db05e1a4f3b72a9"; }; } + { + name = "lodash.clonedeep___lodash.clonedeep_4.5.0.tgz"; + path = fetchurl { + name = "lodash.clonedeep___lodash.clonedeep_4.5.0.tgz"; + url = "https://registry.yarnpkg.com/lodash.clonedeep/-/lodash.clonedeep-4.5.0.tgz"; + sha1 = "e23f3f9c4f8fbdde872529c1071857a086e5ccef"; + }; + } { name = "lodash.debounce___lodash.debounce_4.0.8.tgz"; path = fetchurl { @@ -7273,6 +7433,14 @@ sha1 = "bcc6c49a42a2840ed997f323eada5ecd182e0bfe"; }; } + { + name = "lodash.merge___lodash.merge_4.6.2.tgz"; + path = fetchurl { + name = "lodash.merge___lodash.merge_4.6.2.tgz"; + url = "https://registry.yarnpkg.com/lodash.merge/-/lodash.merge-4.6.2.tgz"; + sha1 = "558aa53b43b661e1925a0afdfa36a9a1085fe57a"; + }; + } { name = "lodash.sortby___lodash.sortby_4.7.0.tgz"; path = fetchurl { @@ -7281,6 +7449,14 @@ sha1 = "edd14c824e2cc9c1e0b0a1b42bb5210516a42438"; }; } + { + name = "lodash.truncate___lodash.truncate_4.4.2.tgz"; + path = fetchurl { + name = "lodash.truncate___lodash.truncate_4.4.2.tgz"; + url = "https://registry.yarnpkg.com/lodash.truncate/-/lodash.truncate-4.4.2.tgz"; + sha1 = "5a350da0b1113b837ecfffd5812cbe58d6eae193"; + }; + } { name = "lodash.uniq___lodash.uniq_4.5.0.tgz"; path = fetchurl { @@ -7497,6 +7673,14 @@ sha1 = "4fcb0999bf9fbc2fcbdd212f6d629b9a56c39259"; }; } + { + name = "micromatch___micromatch_4.0.4.tgz"; + path = fetchurl { + name = "micromatch___micromatch_4.0.4.tgz"; + url = "https://registry.yarnpkg.com/micromatch/-/micromatch-4.0.4.tgz"; + sha1 = "896d519dfe9db25fce94ceb7a500919bf881ebf9"; + }; + } { name = "miller_rabin___miller_rabin_4.0.1.tgz"; path = fetchurl { @@ -7754,11 +7938,11 @@ }; } { - name = "nanoid___nanoid_3.1.22.tgz"; + name = "nanoid___nanoid_3.1.23.tgz"; path = fetchurl { - name = "nanoid___nanoid_3.1.22.tgz"; - url = "https://registry.yarnpkg.com/nanoid/-/nanoid-3.1.22.tgz"; - sha1 = "b35f8fb7d151990a8aebd5aa5015c03cf726f844"; + name = "nanoid___nanoid_3.1.23.tgz"; + url = "https://registry.yarnpkg.com/nanoid/-/nanoid-3.1.23.tgz"; + sha1 = "f744086ce7c2bc47ee0a8472574d5c78e4183a81"; }; } { @@ -7866,27 +8050,11 @@ }; } { - name = "node_releases___node_releases_1.1.61.tgz"; + name = "node_releases___node_releases_1.1.72.tgz"; path = fetchurl { - name = "node_releases___node_releases_1.1.61.tgz"; - url = "https://registry.yarnpkg.com/node-releases/-/node-releases-1.1.61.tgz"; - sha1 = "707b0fca9ce4e11783612ba4a2fcba09047af16e"; - }; - } - { - name = "node_releases___node_releases_1.1.67.tgz"; - path = fetchurl { - name = "node_releases___node_releases_1.1.67.tgz"; - url = "https://registry.yarnpkg.com/node-releases/-/node-releases-1.1.67.tgz"; - sha1 = "28ebfcccd0baa6aad8e8d4d8fe4cbc49ae239c12"; - }; - } - { - name = "node_releases___node_releases_1.1.71.tgz"; - path = fetchurl { - name = "node_releases___node_releases_1.1.71.tgz"; - url = "https://registry.yarnpkg.com/node-releases/-/node-releases-1.1.71.tgz"; - sha1 = "cb1334b179896b1c89ecfdd4b725fb7bbdfc7dbb"; + name = "node_releases___node_releases_1.1.72.tgz"; + url = "https://registry.yarnpkg.com/node-releases/-/node-releases-1.1.72.tgz"; + sha1 = "14802ab6b1039a79a0c7d662b610a5bbd76eacbe"; }; } { @@ -8017,6 +8185,14 @@ sha1 = "6c299d38fdf207746e5d2d46c2877f6f25d15b52"; }; } + { + name = "object_inspect___object_inspect_1.10.3.tgz"; + path = fetchurl { + name = "object_inspect___object_inspect_1.10.3.tgz"; + url = "https://registry.yarnpkg.com/object-inspect/-/object-inspect-1.10.3.tgz"; + sha1 = "c2aa7d2d09f50c99375704f7a0adf24c5782d369"; + }; + } { name = "object_inspect___object_inspect_1.8.0.tgz"; path = fetchurl { @@ -8074,11 +8250,11 @@ }; } { - name = "object.entries___object.entries_1.1.3.tgz"; + name = "object.entries___object.entries_1.1.4.tgz"; path = fetchurl { - name = "object.entries___object.entries_1.1.3.tgz"; - url = "https://registry.yarnpkg.com/object.entries/-/object.entries-1.1.3.tgz"; - sha1 = "c601c7f168b62374541a07ddbd3e2d5e4f7711a6"; + name = "object.entries___object.entries_1.1.4.tgz"; + url = "https://registry.yarnpkg.com/object.entries/-/object.entries-1.1.4.tgz"; + sha1 = "43ccf9a50bc5fd5b649d45ab1a579f24e088cafd"; }; } { @@ -8106,11 +8282,11 @@ }; } { - name = "object.values___object.values_1.1.3.tgz"; + name = "object.values___object.values_1.1.4.tgz"; path = fetchurl { - name = "object.values___object.values_1.1.3.tgz"; - url = "https://registry.yarnpkg.com/object.values/-/object.values-1.1.3.tgz"; - sha1 = "eaa8b1e17589f02f698db093f7c62ee1699742ee"; + name = "object.values___object.values_1.1.4.tgz"; + url = "https://registry.yarnpkg.com/object.values/-/object.values-1.1.4.tgz"; + sha1 = "0d273762833e816b693a637d30073e7051535b30"; }; } { @@ -8385,14 +8561,6 @@ sha1 = "7b60b060705a25a9b90b7f0ed493e5823248a652"; }; } - { - name = "parse_json___parse_json_2.2.0.tgz"; - path = fetchurl { - name = "parse_json___parse_json_2.2.0.tgz"; - url = "https://registry.yarnpkg.com/parse-json/-/parse-json-2.2.0.tgz"; - sha1 = "f480f40434ef80741f8469099f8dea18f55a4dc9"; - }; - } { name = "parse_json___parse_json_4.0.0.tgz"; path = fetchurl { @@ -8538,11 +8706,11 @@ }; } { - name = "path_type___path_type_2.0.0.tgz"; + name = "path_type___path_type_3.0.0.tgz"; path = fetchurl { - name = "path_type___path_type_2.0.0.tgz"; - url = "https://registry.yarnpkg.com/path-type/-/path-type-2.0.0.tgz"; - sha1 = "f012ccb8415b7096fc2daa1054c3d72389594c73"; + name = "path_type___path_type_3.0.0.tgz"; + url = "https://registry.yarnpkg.com/path-type/-/path-type-3.0.0.tgz"; + sha1 = "cef31dc8e0a1a3bb0d105c0cd97cf3bf47f4e36f"; }; } { @@ -8641,6 +8809,14 @@ sha1 = "21f333e9b6b8eaff02468f5146ea406d345f4dad"; }; } + { + name = "picomatch___picomatch_2.3.0.tgz"; + path = fetchurl { + name = "picomatch___picomatch_2.3.0.tgz"; + url = "https://registry.yarnpkg.com/picomatch/-/picomatch-2.3.0.tgz"; + sha1 = "f1f061de8f6a4bf022892e2d128234fb98302972"; + }; + } { name = "pify___pify_2.3.0.tgz"; path = fetchurl { @@ -8649,6 +8825,14 @@ sha1 = "ed141a6ac043a849ea588498e7dca8b15330e90c"; }; } + { + name = "pify___pify_3.0.0.tgz"; + path = fetchurl { + name = "pify___pify_3.0.0.tgz"; + url = "https://registry.yarnpkg.com/pify/-/pify-3.0.0.tgz"; + sha1 = "e5a4acd2c101fdf3d9a4d07f0dbc4db49dd28176"; + }; + } { name = "pify___pify_4.0.1.tgz"; path = fetchurl { @@ -8705,6 +8889,14 @@ sha1 = "f099133df7ede422e81d1d8448270eeb3e4261f3"; }; } + { + name = "pkg_up___pkg_up_2.0.0.tgz"; + path = fetchurl { + name = "pkg_up___pkg_up_2.0.0.tgz"; + url = "https://registry.yarnpkg.com/pkg-up/-/pkg-up-2.0.0.tgz"; + sha1 = "c819ac728059a461cab1c3889a2be3c49a004d7f"; + }; + } { name = "pluralize___pluralize_1.2.1.tgz"; path = fetchurl { @@ -9058,11 +9250,11 @@ }; } { - name = "postcss___postcss_8.2.10.tgz"; + name = "postcss___postcss_8.3.0.tgz"; path = fetchurl { - name = "postcss___postcss_8.2.10.tgz"; - url = "https://registry.yarnpkg.com/postcss/-/postcss-8.2.10.tgz"; - sha1 = "ca7a042aa8aff494b334d0ff3e9e77079f6f702b"; + name = "postcss___postcss_8.3.0.tgz"; + url = "https://registry.yarnpkg.com/postcss/-/postcss-8.3.0.tgz"; + sha1 = "b1a713f6172ca427e3f05ef1303de8b65683325f"; }; } { @@ -9546,11 +9738,11 @@ }; } { - name = "react_select___react_select_4.3.0.tgz"; + name = "react_select___react_select_4.3.1.tgz"; path = fetchurl { - name = "react_select___react_select_4.3.0.tgz"; - url = "https://registry.yarnpkg.com/react-select/-/react-select-4.3.0.tgz"; - sha1 = "6bde634ae7a378b49f3833c85c126f533483fa2e"; + name = "react_select___react_select_4.3.1.tgz"; + url = "https://registry.yarnpkg.com/react-select/-/react-select-4.3.1.tgz"; + sha1 = "389fc07c9bc7cf7d3c377b7a05ea18cd7399cb81"; }; } { @@ -9562,27 +9754,27 @@ }; } { - name = "react_swipeable_views_core___react_swipeable_views_core_0.13.7.tgz"; + name = "react_swipeable_views_core___react_swipeable_views_core_0.14.0.tgz"; path = fetchurl { - name = "react_swipeable_views_core___react_swipeable_views_core_0.13.7.tgz"; - url = "https://registry.yarnpkg.com/react-swipeable-views-core/-/react-swipeable-views-core-0.13.7.tgz"; - sha1 = "c082b553f26e83fd20fc17f934200eb717023c8a"; + name = "react_swipeable_views_core___react_swipeable_views_core_0.14.0.tgz"; + url = "https://registry.yarnpkg.com/react-swipeable-views-core/-/react-swipeable-views-core-0.14.0.tgz"; + sha1 = "6ac443a7cc7bc5ea022fbd549292bb5fff361cce"; }; } { - name = "react_swipeable_views_utils___react_swipeable_views_utils_0.13.9.tgz"; + name = "react_swipeable_views_utils___react_swipeable_views_utils_0.14.0.tgz"; path = fetchurl { - name = "react_swipeable_views_utils___react_swipeable_views_utils_0.13.9.tgz"; - url = "https://registry.yarnpkg.com/react-swipeable-views-utils/-/react-swipeable-views-utils-0.13.9.tgz"; - sha1 = "a66e98f2f4502d8b00182901f80d13b2f903e10f"; + name = "react_swipeable_views_utils___react_swipeable_views_utils_0.14.0.tgz"; + url = "https://registry.yarnpkg.com/react-swipeable-views-utils/-/react-swipeable-views-utils-0.14.0.tgz"; + sha1 = "6b76e251906747482730c22002fe47ab1014ba32"; }; } { - name = "react_swipeable_views___react_swipeable_views_0.13.9.tgz"; + name = "react_swipeable_views___react_swipeable_views_0.14.0.tgz"; path = fetchurl { - name = "react_swipeable_views___react_swipeable_views_0.13.9.tgz"; - url = "https://registry.yarnpkg.com/react-swipeable-views/-/react-swipeable-views-0.13.9.tgz"; - sha1 = "d6a6c508bf5288ad55509f9c65916db5df0f2cec"; + name = "react_swipeable_views___react_swipeable_views_0.14.0.tgz"; + url = "https://registry.yarnpkg.com/react-swipeable-views/-/react-swipeable-views-0.14.0.tgz"; + sha1 = "149c0df3d92220cc89e3f6d5c04a78dfe46f9b54"; }; } { @@ -9634,11 +9826,11 @@ }; } { - name = "read_pkg_up___read_pkg_up_2.0.0.tgz"; + name = "read_pkg_up___read_pkg_up_3.0.0.tgz"; path = fetchurl { - name = "read_pkg_up___read_pkg_up_2.0.0.tgz"; - url = "https://registry.yarnpkg.com/read-pkg-up/-/read-pkg-up-2.0.0.tgz"; - sha1 = "6b72a8048984e0c41e79510fd5e9fa99b3b549be"; + name = "read_pkg_up___read_pkg_up_3.0.0.tgz"; + url = "https://registry.yarnpkg.com/read-pkg-up/-/read-pkg-up-3.0.0.tgz"; + sha1 = "3ed496685dba0f8fe118d0691dc51f4a1ff96f07"; }; } { @@ -9650,11 +9842,11 @@ }; } { - name = "read_pkg___read_pkg_2.0.0.tgz"; + name = "read_pkg___read_pkg_3.0.0.tgz"; path = fetchurl { - name = "read_pkg___read_pkg_2.0.0.tgz"; - url = "https://registry.yarnpkg.com/read-pkg/-/read-pkg-2.0.0.tgz"; - sha1 = "8ef1c0623c6a6db0dc6713c4bfac46332b2368f8"; + name = "read_pkg___read_pkg_3.0.0.tgz"; + url = "https://registry.yarnpkg.com/read-pkg/-/read-pkg-3.0.0.tgz"; + sha1 = "9cbc686978fee65d16c00e2b19c237fcf6e38389"; }; } { @@ -10242,19 +10434,19 @@ }; } { - name = "sass_loader___sass_loader_10.1.1.tgz"; + name = "sass_loader___sass_loader_10.2.0.tgz"; path = fetchurl { - name = "sass_loader___sass_loader_10.1.1.tgz"; - url = "https://registry.yarnpkg.com/sass-loader/-/sass-loader-10.1.1.tgz"; - sha1 = "4ddd5a3d7638e7949065dd6e9c7c04037f7e663d"; + name = "sass_loader___sass_loader_10.2.0.tgz"; + url = "https://registry.yarnpkg.com/sass-loader/-/sass-loader-10.2.0.tgz"; + sha1 = "3d64c1590f911013b3fa48a0b22a83d5e1494716"; }; } { - name = "sass___sass_1.32.12.tgz"; + name = "sass___sass_1.34.0.tgz"; path = fetchurl { - name = "sass___sass_1.32.12.tgz"; - url = "https://registry.yarnpkg.com/sass/-/sass-1.32.12.tgz"; - sha1 = "a2a47ad0f1c168222db5206444a30c12457abb9f"; + name = "sass___sass_1.34.0.tgz"; + url = "https://registry.yarnpkg.com/sass/-/sass-1.34.0.tgz"; + sha1 = "e46d5932d8b0ecc4feb846d861f26a578f7f7172"; }; } { @@ -10633,6 +10825,14 @@ sha1 = "3993bd873bfc48479cca9ea3a547835c7c154b34"; }; } + { + name = "source_map_js___source_map_js_0.6.2.tgz"; + path = fetchurl { + name = "source_map_js___source_map_js_0.6.2.tgz"; + url = "https://registry.yarnpkg.com/source-map-js/-/source-map-js-0.6.2.tgz"; + sha1 = "0bb5de631b41cfbda6cfba8bd05a80efdfd2385e"; + }; + } { name = "source_map_resolve___source_map_resolve_0.5.3.tgz"; path = fetchurl { @@ -10938,11 +11138,11 @@ }; } { - name = "string.prototype.matchall___string.prototype.matchall_4.0.4.tgz"; + name = "string.prototype.matchall___string.prototype.matchall_4.0.5.tgz"; path = fetchurl { - name = "string.prototype.matchall___string.prototype.matchall_4.0.4.tgz"; - url = "https://registry.yarnpkg.com/string.prototype.matchall/-/string.prototype.matchall-4.0.4.tgz"; - sha1 = "608f255e93e072107f5de066f81a2dfb78cf6b29"; + name = "string.prototype.matchall___string.prototype.matchall_4.0.5.tgz"; + url = "https://registry.yarnpkg.com/string.prototype.matchall/-/string.prototype.matchall-4.0.5.tgz"; + sha1 = "59370644e1db7e4c0c045277690cf7b01203c4da"; }; } { @@ -11161,6 +11361,14 @@ sha1 = "1b7dcdcb32b8138801b3e478ba6a51caa89648da"; }; } + { + name = "supports_color___supports_color_8.1.1.tgz"; + path = fetchurl { + name = "supports_color___supports_color_8.1.1.tgz"; + url = "https://registry.yarnpkg.com/supports-color/-/supports-color-8.1.1.tgz"; + sha1 = "cd6fc17e28500cff56c1b86c0a7fd4a54a73005c"; + }; + } { name = "supports_hyperlinks___supports_hyperlinks_2.1.0.tgz"; path = fetchurl { @@ -11194,11 +11402,11 @@ }; } { - name = "table___table_6.0.4.tgz"; + name = "table___table_6.7.1.tgz"; path = fetchurl { - name = "table___table_6.0.4.tgz"; - url = "https://registry.yarnpkg.com/table/-/table-6.0.4.tgz"; - sha1 = "c523dd182177e926c723eb20e1b341238188aa0d"; + name = "table___table_6.7.1.tgz"; + url = "https://registry.yarnpkg.com/table/-/table-6.7.1.tgz"; + sha1 = "ee05592b7143831a8c94f3cee6aae4c1ccef33e2"; }; } { @@ -11633,6 +11841,14 @@ sha1 = "867ac74e3864187b1d3d47d996a78ec5c8830777"; }; } + { + name = "unbox_primitive___unbox_primitive_1.0.1.tgz"; + path = fetchurl { + name = "unbox_primitive___unbox_primitive_1.0.1.tgz"; + url = "https://registry.yarnpkg.com/unbox-primitive/-/unbox-primitive-1.0.1.tgz"; + sha1 = "085e215625ec3162574dc8859abee78a59b14471"; + }; + } { name = "unicode_canonical_property_names_ecmascript___unicode_canonical_property_names_ecmascript_1.0.4.tgz"; path = fetchurl { @@ -12050,11 +12266,11 @@ }; } { - name = "webpack_bundle_analyzer___webpack_bundle_analyzer_4.4.1.tgz"; + name = "webpack_bundle_analyzer___webpack_bundle_analyzer_4.4.2.tgz"; path = fetchurl { - name = "webpack_bundle_analyzer___webpack_bundle_analyzer_4.4.1.tgz"; - url = "https://registry.yarnpkg.com/webpack-bundle-analyzer/-/webpack-bundle-analyzer-4.4.1.tgz"; - sha1 = "c71fb2eaffc10a4754d7303b224adb2342069da1"; + name = "webpack_bundle_analyzer___webpack_bundle_analyzer_4.4.2.tgz"; + url = "https://registry.yarnpkg.com/webpack-bundle-analyzer/-/webpack-bundle-analyzer-4.4.2.tgz"; + sha1 = "39898cf6200178240910d629705f0f3493f7d666"; }; } { @@ -12161,6 +12377,14 @@ sha1 = "85e7f9795108b53d554cec640b2e8aee2a0d4bfd"; }; } + { + name = "which_boxed_primitive___which_boxed_primitive_1.0.2.tgz"; + path = fetchurl { + name = "which_boxed_primitive___which_boxed_primitive_1.0.2.tgz"; + url = "https://registry.yarnpkg.com/which-boxed-primitive/-/which-boxed-primitive-1.0.2.tgz"; + sha1 = "13757bc89b209b049fe5d86430e21cf40a89a8e6"; + }; + } { name = "which_module___which_module_2.0.0.tgz"; path = fetchurl { @@ -12282,11 +12506,11 @@ }; } { - name = "ws___ws_7.4.5.tgz"; + name = "ws___ws_7.4.6.tgz"; path = fetchurl { - name = "ws___ws_7.4.5.tgz"; - url = "https://registry.yarnpkg.com/ws/-/ws-7.4.5.tgz"; - sha1 = "a484dd851e9beb6fdb420027e3885e8ce48986c1"; + name = "ws___ws_7.4.6.tgz"; + url = "https://registry.yarnpkg.com/ws/-/ws-7.4.6.tgz"; + sha1 = "5654ca8ecdeee47c33a9a4bf6d28e2be2980377c"; }; } { diff --git a/third_party/nixpkgs/pkgs/servers/matrix-appservice-discord/default.nix b/third_party/nixpkgs/pkgs/servers/matrix-appservice-discord/default.nix index 4a41f019e1..7b7a67821f 100644 --- a/third_party/nixpkgs/pkgs/servers/matrix-appservice-discord/default.nix +++ b/third_party/nixpkgs/pkgs/servers/matrix-appservice-discord/default.nix @@ -43,7 +43,8 @@ in mkYarnPackage rec { doCheck = true; checkPhase = '' - yarn --offline test + # the default 2000ms timeout is sometimes too short on our busy builders + yarn --offline test --timeout 10000 ''; postInstall = '' diff --git a/third_party/nixpkgs/pkgs/servers/matrix-synapse/default.nix b/third_party/nixpkgs/pkgs/servers/matrix-synapse/default.nix index 0fce998196..1d8c2737b0 100644 --- a/third_party/nixpkgs/pkgs/servers/matrix-synapse/default.nix +++ b/third_party/nixpkgs/pkgs/servers/matrix-synapse/default.nix @@ -12,11 +12,11 @@ let in buildPythonApplication rec { pname = "matrix-synapse"; - version = "1.35.1"; + version = "1.36.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-MJ3RG60rWbcfQxhj34k99AFg8TsPd3ECEw/x2+xU1js="; + sha256 = "sha256-OMbSd64mD2+6GVUxGL4lvQlKAiBuen0PjvyVdk/ePbI="; }; patches = [ @@ -60,7 +60,7 @@ buildPythonApplication rec { typing-extensions unpaddedbase64 ] ++ lib.optional enableSystemd systemd - ++ lib.optional enableRedis hiredis; + ++ lib.optionals enableRedis [ hiredis txredisapi ]; checkInputs = [ mock parameterized openssl ]; diff --git a/third_party/nixpkgs/pkgs/servers/matrix-synapse/matrix-appservice-irc/node-packages.nix b/third_party/nixpkgs/pkgs/servers/matrix-synapse/matrix-appservice-irc/node-packages.nix index cb552b34f9..290eae2c02 100644 --- a/third_party/nixpkgs/pkgs/servers/matrix-synapse/matrix-appservice-irc/node-packages.nix +++ b/third_party/nixpkgs/pkgs/servers/matrix-synapse/matrix-appservice-irc/node-packages.nix @@ -22,13 +22,13 @@ let sha512 = "HV1Cm0Q3ZrpCR93tkWOYiuYIgLxZXZFVG2VgK+MBWjUqZTundupbfx2aXarXuw5Ko5aMcjtJgbSs4vUGBS5v6g=="; }; }; - "@babel/generator-7.14.2" = { + "@babel/generator-7.14.3" = { name = "_at_babel_slash_generator"; packageName = "@babel/generator"; - version = "7.14.2"; + version = "7.14.3"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/generator/-/generator-7.14.2.tgz"; - sha512 = "OnADYbKrffDVai5qcpkMxQ7caomHOoEwjkouqnN2QhydAjowFAZcsdecFIRUBdb+ZcruwYE4ythYmF1UBZU5xQ=="; + url = "https://registry.npmjs.org/@babel/generator/-/generator-7.14.3.tgz"; + sha512 = "bn0S6flG/j0xtQdz3hsjJ624h3W0r3llttBMfyHX3YrZ/KtLYr15bjA0FXkgW7FpvrDuTuElXeVjiKlYRpnOFA=="; }; }; "@babel/helper-function-name-7.14.2" = { @@ -76,13 +76,13 @@ let sha512 = "YSCOwxvTYEIMSGaBQb5kDDsCopDdiUGsqpatp3fOlI4+2HQSkTmEVWnVuySdAC5EWCqSWWTv0ib63RjR7dTBdg=="; }; }; - "@babel/parser-7.14.2" = { + "@babel/parser-7.14.4" = { name = "_at_babel_slash_parser"; packageName = "@babel/parser"; - version = "7.14.2"; + version = "7.14.4"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/parser/-/parser-7.14.2.tgz"; - sha512 = "IoVDIHpsgE/fu7eXBeRWt8zLbDrSvD7H1gpomOkPpBoEN8KCruCqSDdqo8dddwQQrui30KSvQBaMUOJiuFu6QQ=="; + url = "https://registry.npmjs.org/@babel/parser/-/parser-7.14.4.tgz"; + sha512 = "ArliyUsWDUqEGfWcmzpGUzNfLxTdTp6WU4IuP6QFSp9gGfWS6boxFCkJSJ/L4+RG8z/FnIU3WxCk6hPL9SSWeA=="; }; }; "@babel/runtime-7.14.0" = { @@ -112,13 +112,13 @@ let sha512 = "TsdRgvBFHMyHOOzcP9S6QU0QQtjxlRpEYOy3mcCO5RgmC305ki42aSAmfZEMSSYBla2oZ9BMqYlncBaKmD/7iA=="; }; }; - "@babel/types-7.14.2" = { + "@babel/types-7.14.4" = { name = "_at_babel_slash_types"; packageName = "@babel/types"; - version = "7.14.2"; + version = "7.14.4"; src = fetchurl { - url = "https://registry.npmjs.org/@babel/types/-/types-7.14.2.tgz"; - sha512 = "SdjAG/3DikRHpUOjxZgnkbR11xUlyDMUFJdvnIgZEE16mqmY0BINMmc4//JMJglEmn6i7sq6p+mGrFWyZ98EEw=="; + url = "https://registry.npmjs.org/@babel/types/-/types-7.14.4.tgz"; + sha512 = "lCj4aIs0xUefJFQnwwQv2Bxg7Omd6bgquZ6LGC+gGMh6/s5qDVfjuCMlDmYQ15SLsWHd9n+X3E75lKIhl5Lkiw=="; }; }; "@dabh/diagnostics-2.0.2" = { @@ -130,40 +130,40 @@ let sha512 = "+A1YivoVDNNVCdfozHSR8v/jyuuLTMXwjWuxPFlFlUapXoGc+Gj9mDlTDDfrwl7rXCl2tNZ0kE8sIBO6YOn96Q=="; }; }; - "@eslint/eslintrc-0.4.1" = { + "@eslint/eslintrc-0.4.2" = { name = "_at_eslint_slash_eslintrc"; packageName = "@eslint/eslintrc"; - version = "0.4.1"; + version = "0.4.2"; src = fetchurl { - url = "https://registry.npmjs.org/@eslint/eslintrc/-/eslintrc-0.4.1.tgz"; - sha512 = "5v7TDE9plVhvxQeWLXDTvFvJBdH6pEsdnl2g/dAptmuFEPedQ4Erq5rsDsX+mvAM610IhNaO2W5V1dOOnDKxkQ=="; + url = "https://registry.npmjs.org/@eslint/eslintrc/-/eslintrc-0.4.2.tgz"; + sha512 = "8nmGq/4ycLpIwzvhI4tNDmQztZ8sp+hI7cyG8i1nQDhkAbRzHpXPidRAHlNvCZQpJTKw5ItIpMw9RSToGF00mg=="; }; }; - "@nodelib/fs.scandir-2.1.4" = { + "@nodelib/fs.scandir-2.1.5" = { name = "_at_nodelib_slash_fs.scandir"; packageName = "@nodelib/fs.scandir"; - version = "2.1.4"; + version = "2.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/@nodelib/fs.scandir/-/fs.scandir-2.1.4.tgz"; - sha512 = "33g3pMJk3bg5nXbL/+CY6I2eJDzZAni49PfJnL5fghPTggPvBd/pFNSgJsdAgWptuFu7qq/ERvOYFlhvsLTCKA=="; + url = "https://registry.npmjs.org/@nodelib/fs.scandir/-/fs.scandir-2.1.5.tgz"; + sha512 = "vq24Bq3ym5HEQm2NKCr3yXDwjc7vTsEThRDnkp2DK9p1uqLR+DHurm/NOTo0KG7HYHU7eppKZj3MyqYuMBf62g=="; }; }; - "@nodelib/fs.stat-2.0.4" = { + "@nodelib/fs.stat-2.0.5" = { name = "_at_nodelib_slash_fs.stat"; packageName = "@nodelib/fs.stat"; - version = "2.0.4"; + version = "2.0.5"; src = fetchurl { - url = "https://registry.npmjs.org/@nodelib/fs.stat/-/fs.stat-2.0.4.tgz"; - sha512 = "IYlHJA0clt2+Vg7bccq+TzRdJvv19c2INqBSsoOLp1je7xjtr7J26+WXR72MCdvU9q1qTzIWDfhMf+DRvQJK4Q=="; + url = "https://registry.npmjs.org/@nodelib/fs.stat/-/fs.stat-2.0.5.tgz"; + sha512 = "RkhPPp2zrqDAQA/2jNhnztcPAlv64XdhIp7a7454A5ovI7Bukxgt7MX7udwAu3zg1DcpPU0rz3VV1SeaqvY4+A=="; }; }; - "@nodelib/fs.walk-1.2.6" = { + "@nodelib/fs.walk-1.2.7" = { name = "_at_nodelib_slash_fs.walk"; packageName = "@nodelib/fs.walk"; - version = "1.2.6"; + version = "1.2.7"; src = fetchurl { - url = "https://registry.npmjs.org/@nodelib/fs.walk/-/fs.walk-1.2.6.tgz"; - sha512 = "8Broas6vTtW4GIXTAHDoE32hnN2M5ykgCpWGbuXHQ15vEMqr23pB76e/GZcYsZCHALv50ktd24qhEyKr6wBtow=="; + url = "https://registry.npmjs.org/@nodelib/fs.walk/-/fs.walk-1.2.7.tgz"; + sha512 = "BTIhocbPBSrRmHxOAJFtR18oLhxTtAFDAvL8hY1S3iU8k+E60W/YFs4jrixGzQjMpF4qPXxIQHcjVD9dz1C2QA=="; }; }; "@sentry/core-5.30.0" = { @@ -247,13 +247,13 @@ let sha512 = "XIB2XbzHTN6ieIjfIMV9hlVcfPU26s2vafYWQcZHWXHOxiaRZYEDKEwdl129Zyg50+foYV2jCgtrqSA6qNuNSA=="; }; }; - "@types/bluebird-3.5.34" = { + "@types/bluebird-3.5.35" = { name = "_at_types_slash_bluebird"; packageName = "@types/bluebird"; - version = "3.5.34"; + version = "3.5.35"; src = fetchurl { - url = "https://registry.npmjs.org/@types/bluebird/-/bluebird-3.5.34.tgz"; - sha512 = "QMc57Pf067Rr78l6f4FftvuIXPYxu0VYFRKrZk1Clv+LWy7gN2fTBiAiv68askFHEHZcTLPFd01kNlpKOiSPgQ=="; + url = "https://registry.npmjs.org/@types/bluebird/-/bluebird-3.5.35.tgz"; + sha512 = "2WeeXK7BuQo7yPI4WGOBum90SzF/f8rqlvpaXx4rjeTmNssGRDHWf7fgDUH90xMB3sUOu716fUK5d+OVx0+ncQ=="; }; }; "@types/body-parser-1.19.0" = { @@ -274,22 +274,22 @@ let sha512 = "ePPA/JuI+X0vb+gSWlPKOY0NdNAie/rPUqX2GUPpbZwiKTkSPhjXWuee47E4MtE54QVzGCQMQkAL6JhV2E1+cQ=="; }; }; - "@types/express-4.17.11" = { + "@types/express-4.17.12" = { name = "_at_types_slash_express"; packageName = "@types/express"; - version = "4.17.11"; + version = "4.17.12"; src = fetchurl { - url = "https://registry.npmjs.org/@types/express/-/express-4.17.11.tgz"; - sha512 = "no+R6rW60JEc59977wIxreQVsIEOAYwgCqldrA/vkpCnbD7MqTefO97lmoBe4WE0F156bC4uLSP1XHDOySnChg=="; + url = "https://registry.npmjs.org/@types/express/-/express-4.17.12.tgz"; + sha512 = "pTYas6FrP15B1Oa0bkN5tQMNqOcVXa9j4FTFtO8DWI9kppKib+6NJtfTOOLcwxuuYvcX2+dVG6et1SxW/Kc17Q=="; }; }; - "@types/express-serve-static-core-4.17.19" = { + "@types/express-serve-static-core-4.17.21" = { name = "_at_types_slash_express-serve-static-core"; packageName = "@types/express-serve-static-core"; - version = "4.17.19"; + version = "4.17.21"; src = fetchurl { - url = "https://registry.npmjs.org/@types/express-serve-static-core/-/express-serve-static-core-4.17.19.tgz"; - sha512 = "DJOSHzX7pCiSElWaGR8kCprwibCB/3yW6vcT8VG3P0SJjnv19gnWG/AZMfM60Xj/YJIp/YCaDHyvzsFVeniARA=="; + url = "https://registry.npmjs.org/@types/express-serve-static-core/-/express-serve-static-core-4.17.21.tgz"; + sha512 = "gwCiEZqW6f7EoR8TTEfalyEhb1zA5jQJnRngr97+3pzMaO1RKoI1w2bw07TK72renMUVWcWS5mLI6rk1NqN0nA=="; }; }; "@types/extend-3.0.1" = { @@ -337,13 +337,13 @@ let sha512 = "qHQRLZ0e6l/XK/2Qb2v5N1ujmdttYkUvnRI4nPIifMy6vYwoAnER10xhX13isWjjQtNsrjNLinZgDDguzPmEKw=="; }; }; - "@types/node-15.0.3" = { + "@types/node-15.12.2" = { name = "_at_types_slash_node"; packageName = "@types/node"; - version = "15.0.3"; + version = "15.12.2"; src = fetchurl { - url = "https://registry.npmjs.org/@types/node/-/node-15.0.3.tgz"; - sha512 = "/WbxFeBU+0F79z9RdEOXH4CsDga+ibi5M8uEYr91u3CkT/pdWcV8MCook+4wDPnZBexRdwWS+PiVZ2xJviAzcQ=="; + url = "https://registry.npmjs.org/@types/node/-/node-15.12.2.tgz"; + sha512 = "zjQ69G564OCIWIOHSXyQEEDpdpGl+G348RAKY0XXy9Z5kU9Vzv1GMNnkar/ZJ8dzXB3COzD9Mo9NtRZ4xfgUww=="; }; }; "@types/nopt-3.0.29" = { @@ -355,13 +355,13 @@ let sha1 = "f19df3db4c97ee1459a2740028320a71d70964ce"; }; }; - "@types/pg-7.14.11" = { + "@types/pg-8.6.0" = { name = "_at_types_slash_pg"; packageName = "@types/pg"; - version = "7.14.11"; + version = "8.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/@types/pg/-/pg-7.14.11.tgz"; - sha512 = "EnZkZ1OMw9DvNfQkn2MTJrwKmhJYDEs5ujWrPfvseWNoI95N8B4HzU/Ltrq5ZfYxDX/Zg8mTzwr6UAyTjjFvXA=="; + url = "https://registry.npmjs.org/@types/pg/-/pg-8.6.0.tgz"; + sha512 = "3JXFrsl8COoqVB1+2Pqelx6soaiFVXzkT3fkuSNe7GB40ysfT0FHphZFPiqIXpMyTHSFRdLTyZzrFBrJRPAArA=="; }; }; "@types/qs-6.9.6" = { @@ -382,13 +382,13 @@ let sha512 = "ewFXqrQHlFsgc09MK5jP5iR7vumV/BYayNC6PgJO2LPe8vrnNFyjQjSppfEngITi0qvfKtzFvgKymGheFM9UOA=="; }; }; - "@types/sanitize-html-1.27.2" = { + "@types/sanitize-html-2.3.1" = { name = "_at_types_slash_sanitize-html"; packageName = "@types/sanitize-html"; - version = "1.27.2"; + version = "2.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/@types/sanitize-html/-/sanitize-html-1.27.2.tgz"; - sha512 = "DrH26m7CV6PB4YVckjbSIx+xloB7HBolr9Ctm0gZBffSu5dDV4yJKFQGPquJlReVW+xmg59gx+b/8/qYHxZEuw=="; + url = "https://registry.npmjs.org/@types/sanitize-html/-/sanitize-html-2.3.1.tgz"; + sha512 = "+UT/XRluJuCunRftwO6OzG6WOBgJ+J3sROIoSJWX+7PB2FtTJTEJLrHCcNwzCQc0r60bej3WAbaigK+VZtZCGw=="; }; }; "@types/serve-static-1.13.9" = { @@ -400,67 +400,67 @@ let sha512 = "ZFqF6qa48XsPdjXV5Gsz0Zqmux2PerNd3a/ktL45mHpa19cuMi/cL8tcxdAx497yRh+QtYPuofjT9oWw9P7nkA=="; }; }; - "@typescript-eslint/eslint-plugin-4.23.0" = { + "@typescript-eslint/eslint-plugin-4.26.1" = { name = "_at_typescript-eslint_slash_eslint-plugin"; packageName = "@typescript-eslint/eslint-plugin"; - version = "4.23.0"; + version = "4.26.1"; src = fetchurl { - url = "https://registry.npmjs.org/@typescript-eslint/eslint-plugin/-/eslint-plugin-4.23.0.tgz"; - sha512 = "tGK1y3KIvdsQEEgq6xNn1DjiFJtl+wn8JJQiETtCbdQxw1vzjXyAaIkEmO2l6Nq24iy3uZBMFQjZ6ECf1QdgGw=="; + url = "https://registry.npmjs.org/@typescript-eslint/eslint-plugin/-/eslint-plugin-4.26.1.tgz"; + sha512 = 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"https://registry.npmjs.org/chardet/-/chardet-1.3.0.tgz"; + sha512 = "cyTQGGptIjIT+CMGT5J/0l9c6Fb+565GCFjjeUTKxUO7w3oR+FcNCMEKTn5xtVKaLFmladN7QF68IiQsv5Fbdw=="; + }; + }; "chokidar-3.5.1" = { name = "chokidar"; packageName = "chokidar"; @@ -1048,6 +1057,15 @@ let sha512 = "jgIoum0OfQfq9Whcfc2z/VhCNcmQjWbey6qBX0vqt7YICflUmBCh9E9CiQD5GSJ+Uehixm3NUwHVhqUAWRivZg=="; }; }; + "colorette-1.2.2" = { + name = "colorette"; + packageName = "colorette"; + version = "1.2.2"; + src = fetchurl { + url = "https://registry.npmjs.org/colorette/-/colorette-1.2.2.tgz"; + sha512 = "MKGMzyfeuutC/ZJ1cba9NqcNpfeqMUcYmyF1ZFY6/Cn7CNSAKx6a+s48sqLqyAiZuaP2TcqMhoo+dlwFnVxT9w=="; + }; + }; "colors-1.4.0" = { name = "colors"; packageName = "colors"; @@ -1273,6 +1291,15 @@ let sha1 = "b369d6fb5dbc13eecf524f91b070feedc357cf34"; }; }; + "deepmerge-4.2.2" = { + name = "deepmerge"; + packageName = "deepmerge"; + version = "4.2.2"; + src = fetchurl { + url = "https://registry.npmjs.org/deepmerge/-/deepmerge-4.2.2.tgz"; + sha512 = "FJ3UgI4gIl+PHZm53knsuSFpE+nESMr7M4v9QcgB7S63Kj/6WqMiFQJpBBYz1Pt+66bZpP3Q7Lye0Oo9MPKEdg=="; + }; + }; "default-require-extensions-2.0.0" = { name = "default-require-extensions"; packageName = "default-require-extensions"; @@ -1345,13 +1372,13 @@ let sha512 = "yS+Q5i3hBf7GBkd4KG8a7eBNNWNGLTaEwwYWUijIYM7zrlYDM0BFXHjjPWlWZ1Rg7UaddZeIDmi9jF3HmqiQ2w=="; }; }; - "dom-serializer-1.3.1" = { + "dom-serializer-1.3.2" = { name = "dom-serializer"; packageName = "dom-serializer"; - version = "1.3.1"; + version = "1.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/dom-serializer/-/dom-serializer-1.3.1.tgz"; - sha512 = "Pv2ZluG5ife96udGgEDovOOOA5UELkltfJpnIExPrAk1LTvecolUGn6lIaoLh86d83GiB86CjzciMd9BuRB71Q=="; + url = "https://registry.npmjs.org/dom-serializer/-/dom-serializer-1.3.2.tgz"; + sha512 = "5c54Bk5Dw4qAxNOI1pFEizPSjVsx5+bpJKmL2kPn8JhBUq2q09tTCa3mjijun2NfK78NMouDYNMBkOrPZiS+ig=="; }; }; "domelementtype-2.2.0" = { @@ -1381,13 +1408,13 @@ let sha512 = 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"https://registry.npmjs.org/escape-string-regexp/-/escape-string-regexp-4.0.0.tgz"; + sha512 = "TtpcNJ3XAzx3Gq8sWRzJaVajRs0uVxA2YAkdb1jm2YkPz4G6egUFAyA3n5vtEIZefPk5Wa4UXbKuS5fKkJWdgA=="; + }; + }; + "eslint-7.28.0" = { name = "eslint"; packageName = "eslint"; - version = "7.26.0"; + version = "7.28.0"; src = fetchurl { - url = "https://registry.npmjs.org/eslint/-/eslint-7.26.0.tgz"; - sha512 = "4R1ieRf52/izcZE7AlLy56uIHHDLT74Yzz2Iv2l6kDaYvEu9x+wMB5dZArVL8SYGXSYV2YAg70FcW5Y5nGGNIg=="; + url = "https://registry.npmjs.org/eslint/-/eslint-7.28.0.tgz"; + sha512 = "UMfH0VSjP0G4p3EWirscJEQ/cHqnT/iuH6oNZOB94nBjWbMnhGEPxsZm1eyIW0C/9jLI0Fow4W5DXLjEI7mn1g=="; }; }; "eslint-scope-5.1.1" = { @@ -1570,6 +1606,15 @@ let sha512 = "w94dQYoauyvlDc43XnGB8lU3Zt713vNChgt4EWwhXAP2XkBvndfxF0AgIqKOOasjPIPzj9JqgwkwbCYD0/V3Zg=="; }; }; + "eslint-utils-3.0.0" = { + name = "eslint-utils"; + packageName = "eslint-utils"; + version = "3.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/eslint-utils/-/eslint-utils-3.0.0.tgz"; + sha512 = "uuQC43IGctw68pJA1RgbQS8/NP7rch6Cwd4j3ZBtgo4/8Flj4eGE7ZYSZRN3iq5pVUv6GPdW5Z1RFleo84uLDA=="; + }; + }; "eslint-visitor-keys-1.3.0" = { name = "eslint-visitor-keys"; packageName = "eslint-visitor-keys"; @@ -1885,13 +1930,13 @@ let sha512 = "1lLKB2Mu3aGP1Q/2eCOx0fNbRMe7XdwktwOruhfqqd0rIJWwN4Dh+E3hrPSlDCXnSR7UtZ1N38rVXm+6+MEhJQ=="; }; }; - "forwarded-0.1.2" = { + "forwarded-0.2.0" = { name = "forwarded"; packageName = "forwarded"; - version = "0.1.2"; + version = "0.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/forwarded/-/forwarded-0.1.2.tgz"; - sha1 = "98c23dab1175657b8c0573e8ceccd91b0ff18c84"; + url = "https://registry.npmjs.org/forwarded/-/forwarded-0.2.0.tgz"; + sha512 = "buRG0fpBtRHSTCOASe6hD258tEubFoRLb4ZNA6NxMVHNw2gOcwHo9wyablzMzOA5z9xA9L1KNjk/Nt6MT9aYow=="; }; }; "fresh-0.5.2" = { @@ -2047,22 +2092,13 @@ let sha512 = 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"ignore"; @@ -2543,6 +2597,15 @@ let sha512 = "Fd4gABb+ycGAmKou8eMftCupSir5lRxqf4aD/vd0cD2qc4HL07OjCeuHMr8Ro4CoMaeCKDB0/ECBOVWjTwUvPQ=="; }; }; + "is-plain-object-5.0.0" = { + name = "is-plain-object"; + packageName = "is-plain-object"; + version = "5.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/is-plain-object/-/is-plain-object-5.0.0.tgz"; + sha512 = "VRSzKkbMm5jMDoKLbltAkFQ5Qr7VDiTFGXxYFXXowVj387GeGNOCsOH6Msy00SGZ3Fp84b1Naa1psqgcCIEP5Q=="; + }; + }; "is-promise-2.2.2" = { name = "is-promise"; packageName = "is-promise"; @@ -2831,6 +2894,15 @@ let sha512 = "9ykJ/46SN/9KPM/sichzQ7OvXyGDYKGTaDlKMGCAlg2UK8KRy4jb0d8sFc+0Tt0YYnThq8X2RZgCg74RPxgcVA=="; }; }; + "klona-2.0.4" = { + name = "klona"; + packageName = "klona"; + version = "2.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/klona/-/klona-2.0.4.tgz"; + sha512 = "ZRbnvdg/NxqzC7L9Uyqzf4psi1OM4Cuc+sJAkQPjO6XkQIJTNbfK2Rsmbw8fx1p2mkZdp2FZYo2+LwXYY/uwIA=="; + }; + }; "kuler-2.0.0" = { name = "kuler"; packageName = "kuler"; @@ -2921,6 +2993,15 @@ let sha1 = "fb030917f86a3134e5bc9bec0d69e0013ddfedb2"; }; }; + "lodash.merge-4.6.2" = { + name = "lodash.merge"; + packageName = "lodash.merge"; + version = "4.6.2"; + src = fetchurl { + url = "https://registry.npmjs.org/lodash.merge/-/lodash.merge-4.6.2.tgz"; + sha512 = "0KpjqXRVvrYyCsX1swR/XTK0va6VQkQM6MNo7PqW77ByjAhoARA8EfrP1N4+KlKj8YS0ZUCtRT/YUuhyYDujIQ=="; + }; + }; "lodash.truncate-4.4.2" = { name = "lodash.truncate"; packageName = "lodash.truncate"; @@ -3038,13 +3119,13 @@ let sha512 = "mfgMpmV3dWLtzrd4V/3XtqUD0P44I/mTgsRreW5jMhSaUnnRGZbpptBw2q4/axbLjw2FarlWtOVgertDGMtccA=="; }; }; - "matrix-appservice-bridge-2.6.0" = { + "matrix-appservice-bridge-2.6.1" = { name = "matrix-appservice-bridge"; packageName = "matrix-appservice-bridge"; - version = "2.6.0"; + version = "2.6.1"; src = fetchurl { - url = "https://registry.npmjs.org/matrix-appservice-bridge/-/matrix-appservice-bridge-2.6.0.tgz"; - sha512 = "o1KHQHG1GdfUhTFBXVLztwbTowuCFO9/h8n2zdkRK/bZsdcXSFQVfUwDtRULcyinD4N7r0Lrwlg1LyR0pg2WSw=="; + url = "https://registry.npmjs.org/matrix-appservice-bridge/-/matrix-appservice-bridge-2.6.1.tgz"; + sha512 = "XNOziYVQoTQ9cym3Z2acXy8CKRXPVcEbni0XXCUfvu4O9+cBjUPywtRmhDBENsl/bgGbFKqbJNr68E/j9j+Tbw=="; }; }; "matrix-bot-sdk-0.4.0" = { @@ -3074,6 +3155,15 @@ let sha512 = "JFIMJPNGGqi0myzIlN94SQReUbCrWi1TW5PZih1OGXzUj2wXYz3puktV/f64HZYn6D1ZKcwxZdLuNCG8cRuCyw=="; }; }; + "matrix-org-irc-1.0.0-alpha4" = { + name = "matrix-org-irc"; + packageName = "matrix-org-irc"; + version = "1.0.0-alpha4"; + src = fetchurl { + url = "https://registry.npmjs.org/matrix-org-irc/-/matrix-org-irc-1.0.0-alpha4.tgz"; + sha512 = "2wKzQSpITrG9vChfw9d0goDcQZgKdaL7hgPzQwaybO9NF96HLarXFhznaFtngJiaaBAN52jkEetsQKV/lEfPqA=="; + }; + }; "media-typer-0.3.0" = { name = "media-typer"; packageName = "media-typer"; @@ -3137,22 +3227,22 @@ let sha512 = "x0Vn8spI+wuJ1O6S7gnbaQg8Pxh4NNHb7KSINmEWKiPE4RKOplvijn+NkmYmmRgP68mc70j2EbeTFRsrswaQeg=="; }; }; - "mime-db-1.47.0" = { + "mime-db-1.48.0" = { name = "mime-db"; packageName = "mime-db"; - version = "1.47.0"; + version = "1.48.0"; src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.47.0.tgz"; - sha512 = "QBmA/G2y+IfeS4oktet3qRZ+P5kPhCKRXxXnQEudYqUaEioAU1/Lq2us3D/t1Jfo4hE9REQPrbB7K5sOczJVIw=="; + url = "https://registry.npmjs.org/mime-db/-/mime-db-1.48.0.tgz"; + sha512 = "FM3QwxV+TnZYQ2aRqhlKBMHxk10lTbMt3bBkMAp54ddrNeVSfcQYOOKuGuy3Ddrm38I04If834fOUSq1yzslJQ=="; }; }; - "mime-types-2.1.30" = { + "mime-types-2.1.31" = { name = "mime-types"; packageName = "mime-types"; - version = "2.1.30"; + version = "2.1.31"; src = fetchurl { - url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.30.tgz"; - sha512 = "crmjA4bLtR8m9qLpHvgxSChT+XoSlZi8J4n/aIdn3z92e/U47Z0V/yl+Wh9W046GgFVAmoNR/fmdbZYcSSIUeg=="; + url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.31.tgz"; + sha512 = "XGZnNzm3QvgKxa8dpzyhFTHmpP3l5YNusmne07VUOXxou9CqUqYa/HBy124RqtVh/O2pECas/MOcsDgpilPOPg=="; }; }; "mimic-response-1.0.1" = { @@ -3263,6 +3353,15 @@ let sha512 = "M2ufzIiINKCuDfBSAUr1vWQ+vuVcA9kqx8JJUsbQi6yf1uGRyb7HfpdfUr5qLXf3B/t8dPvcjhKMmlfnP47EzQ=="; }; }; + "nanoid-3.1.23" = { + name = "nanoid"; + packageName = "nanoid"; + version = "3.1.23"; + src = fetchurl { + url = "https://registry.npmjs.org/nanoid/-/nanoid-3.1.23.tgz"; + sha512 = "FiB0kzdP0FFVGDKlRLEQ1BgDzU87dy5NnzjeW9YZNt+/c3+q82EQDUwniSAUxp/F0gFNI1ZhKU1FqYsMuqZVnw=="; + }; + }; "natural-compare-1.4.0" = { name = "natural-compare"; packageName = "natural-compare"; @@ -3362,13 +3461,13 @@ let sha512 = "6eZs5Ls3WtCisHWp9S2GUy8dqkpGi4BVSz3GaqiE6ezub0512ESztXUwUB6C6IKbQkY2Pnb/mD4WYojCRwcwLA=="; }; }; - "normalize-url-4.5.0" = { + "normalize-url-4.5.1" = { name = "normalize-url"; packageName = "normalize-url"; - version = "4.5.0"; + version = "4.5.1"; src = fetchurl { - url = "https://registry.npmjs.org/normalize-url/-/normalize-url-4.5.0.tgz"; - sha512 = "2s47yzUxdexf1OhyRi4Em83iQk0aPvwTddtFz4hnSSw9dCEsLEGf6SwIO8ss/19S9iBb5sJaOuTvTGDeZI00BQ=="; + url = "https://registry.npmjs.org/normalize-url/-/normalize-url-4.5.1.tgz"; + sha512 = "9UZCFRHQdNrfTpGg8+1INIg93B6zE0aXMVFkw1WFwvO4SlZywU6aLg5Of0Ap/PgcbSw4LNxvMWXMeugwMCX0AA=="; }; }; "nyc-14.1.1" = { @@ -3389,13 +3488,13 @@ let sha512 = "fexhUFFPTGV8ybAtSIGbV6gOkSv8UtRbDBnAyLQw4QPKkgNlsH2ByPGtMUqdWkos6YCRmAqViwgZrJc/mRDzZQ=="; }; }; - "object-hash-2.1.1" = { + "object-hash-2.2.0" = { name = "object-hash"; packageName = "object-hash"; - version = "2.1.1"; + version = "2.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/object-hash/-/object-hash-2.1.1.tgz"; - sha512 = "VOJmgmS+7wvXf8CjbQmimtCnEx3IAoLxI3fp2fbWehxrWBcAQFbk+vcwb6vzR0VZv/eNCJ/27j151ZTwqW/JeQ=="; + url = "https://registry.npmjs.org/object-hash/-/object-hash-2.2.0.tgz"; + sha512 = "gScRMn0bS5fH+IuwyIFgnh9zBdo4DV+6GhygmWM9HyNJSgS0hScp1f5vjtm7oIIOiT9trXrShAkLFSc2IqKNgw=="; }; }; "object-inspect-1.10.3" = { @@ -3623,13 +3722,13 @@ let sha512 = "ojmeN0qd+y0jszEtoY48r0Peq5dwMEkIlCOu6Q5f41lfkswXuKtYrhgoTpLnyIcHm24Uhqx+5Tqm2InSwLhE6Q=="; }; }; - "path-parse-1.0.6" = { + "path-parse-1.0.7" = { name = "path-parse"; packageName = "path-parse"; - version = "1.0.6"; + version = "1.0.7"; src = fetchurl { - url = "https://registry.npmjs.org/path-parse/-/path-parse-1.0.6.tgz"; - sha512 = "GSmOT2EbHrINBf9SR7CDELwlJ8AENk3Qn7OikK4nFYAu3Ote2+JYNVvkpAEQm3/TLNEJFD/xZJjzyxg3KBWOzw=="; + url = "https://registry.npmjs.org/path-parse/-/path-parse-1.0.7.tgz"; + sha512 = "LDJzPVEEEPR+y48z93A0Ed0yXb8pAByGWo/k5YYdYgpY2/2EsOsksJrq7lOHxryrVOn1ejG6oAp8ahvOIQD8sw=="; }; }; "path-to-regexp-0.1.7" = { @@ -3731,13 +3830,13 @@ let sha512 = "YmuA56alyBq7M59vxVBfPJrGSozru8QAdoNlWuW3cz8l+UX3cWge0vTvjKhsSHSJpo3Bom8/Mm6hf0TR5GY0+w=="; }; }; - "picomatch-2.2.3" = { + "picomatch-2.3.0" = { name = "picomatch"; packageName = "picomatch"; - version = "2.2.3"; + version = "2.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/picomatch/-/picomatch-2.2.3.tgz"; - sha512 = "KpELjfwcCDUb9PeigTs2mBJzXUPzAuP2oPcA989He8Rte0+YUAjw1JVedDhuTKPkHjSYzMN3npC9luThGYEKdg=="; + url = "https://registry.npmjs.org/picomatch/-/picomatch-2.3.0.tgz"; + sha512 = "lY1Q/PiJGC2zOv/z391WOTD+Z02bCgsFfvxoXXf6h7kv9o+WmsmzYqrAwY63sNgOxE4xEdq0WyUnXfKeBrSvYw=="; }; }; "pify-3.0.0" = { @@ -3776,6 +3875,15 @@ let sha512 = "3QT8bBJeX/S5zKTTjTCIjRF3If4avAT6kqxcASlTWEtAFCb9NH0OUxNDfgZSWdP5fJnBYCMEWkIFfWeugjzYMg=="; }; }; + "postcss-8.3.0" = { + name = "postcss"; + packageName = "postcss"; + version = "8.3.0"; + src = fetchurl { + url = "https://registry.npmjs.org/postcss/-/postcss-8.3.0.tgz"; + sha512 = "+ogXpdAjWGa+fdYY5BQ96V/6tAo+TdSSIMP5huJBIygdWwKtVoB5JWZ7yUd4xZ8r+8Kvvx4nyg/PQ071H4UtcQ=="; + }; + }; "postgres-array-2.0.0" = { name = "postgres-array"; packageName = "postgres-array"; @@ -3857,13 +3965,13 @@ let sha512 = "jT9VccZCWrJWXdyEtQddCDszYsiuWj5T0ekrPszi/WEegj3IZy6Mm09iOOVM86A4IKMWq8hZkT2dD9MaSe+sng=="; }; }; - "proxy-addr-2.0.6" = { + "proxy-addr-2.0.7" = { name = "proxy-addr"; packageName = "proxy-addr"; - version = "2.0.6"; + version = "2.0.7"; src = fetchurl { - url = "https://registry.npmjs.org/proxy-addr/-/proxy-addr-2.0.6.tgz"; - sha512 = "dh/frvCBVmSsDYzw6n926jv974gddhkFPfiN8hPOi30Wax25QZyZEGveluCgliBnqmuM+UJmBErbAUFIoDbjOw=="; + url = "https://registry.npmjs.org/proxy-addr/-/proxy-addr-2.0.7.tgz"; + sha512 = "llQsMLSUDUPT44jdrU/O37qlnifitDP+ZwrmmZcoSKyLKvtZxpyV0n2/bD/N4tBAAZ/gJEdZU7KMraoK1+XYAg=="; }; }; "proxyquire-1.8.0" = { @@ -4271,6 +4379,15 @@ let sha512 = "M4M5iXDAUEcZKLXkmk90zSYWEtk5NH3JmojQxKxV371fnMh+x9t1rqdmXaGoyEHw3z/X/8vnFhKjGL5xFGOJ3A=="; }; }; + "sanitize-html-2.4.0" = { + name = "sanitize-html"; + packageName = "sanitize-html"; + version = "2.4.0"; + src = fetchurl { + url = "https://registry.npmjs.org/sanitize-html/-/sanitize-html-2.4.0.tgz"; + sha512 = "Y1OgkUiTPMqwZNRLPERSEi39iOebn2XJLbeiGOBhaJD/yLqtLGu6GE5w7evx177LeGgSE+4p4e107LMiydOf6A=="; + }; + }; "semver-5.7.1" = { name = "semver"; packageName = "semver"; @@ -4424,6 +4541,15 @@ let sha512 = "UjgapumWlbMhkBgzT7Ykc5YXUT46F0iKu8SGXq0bcwP5dz/h0Plj6enJqjz1Zbq2l5WaqYnrVbwWOWMyF3F47g=="; }; }; + "source-map-js-0.6.2" = { + name = "source-map-js"; + packageName = "source-map-js"; + version = "0.6.2"; + src = fetchurl { + url = "https://registry.npmjs.org/source-map-js/-/source-map-js-0.6.2.tgz"; + sha512 = "/3GptzWzu0+0MBQFrDKzw/DvvMTUORvgY6k6jd/VS6iCR4RDTKWH6v6WPwQoUO8667uQEf9Oe38DxAYWY5F/Ug=="; + }; + }; "spawn-wrap-1.4.3" = { name = "spawn-wrap"; packageName = "spawn-wrap"; @@ -4460,13 +4586,13 @@ let sha512 = "cbqHunsQWnJNE6KhVSMsMeH5H/L9EpymbzqTQ3uLwNCLZ1Q481oWaofqH7nO6V07xlXwY6PhQdQ2IedWx/ZK4Q=="; }; }; - "spdx-license-ids-3.0.7" = { + "spdx-license-ids-3.0.9" = { name = "spdx-license-ids"; packageName = "spdx-license-ids"; - version = "3.0.7"; + version = "3.0.9"; src = fetchurl { - url = "https://registry.npmjs.org/spdx-license-ids/-/spdx-license-ids-3.0.7.tgz"; - sha512 = "U+MTEOO0AiDzxwFvoa4JVnMV6mZlJKk2sBLt90s7G0Gd0Mlknc7kxEn3nuDPNZRta7O2uy8oLcZLVT+4sqNZHQ=="; + url = "https://registry.npmjs.org/spdx-license-ids/-/spdx-license-ids-3.0.9.tgz"; + sha512 = "Ki212dKK4ogX+xDo4CtOZBVIwhsKBEfsEEcwmJfLQzirgc2jIWdzg40Unxz/HzEUqM1WFzVlQSMF9kZZ2HboLQ=="; }; }; "split2-3.2.2" = { @@ -4640,13 +4766,13 @@ let sha512 = "qpCAvRl9stuOHveKsn7HncJRvv501qIacKzQlO/+Lwxc9+0q2wLyv4Dfvt80/DPn2pqOBsJdDiogXGR9+OvwRw=="; }; }; - "table-6.7.0" = { + "table-6.7.1" = { name = "table"; packageName = "table"; - version = "6.7.0"; + version = "6.7.1"; src = fetchurl { - url = "https://registry.npmjs.org/table/-/table-6.7.0.tgz"; - sha512 = "SAM+5p6V99gYiiy2gT5ArdzgM1dLDed0nkrWmG6Fry/bUS/m9x83BwpJUOf1Qj/x2qJd+thL6IkIx7qPGRxqBw=="; + url = "https://registry.npmjs.org/table/-/table-6.7.1.tgz"; + sha512 = "ZGum47Yi6KOOFDE8m223td53ath2enHcYLgOCjGr5ngu8bdIARQk6mN/wRMv4yMRcHnCSnHbCEha4sobQx5yWg=="; }; }; "tdigest-0.1.1" = { @@ -4838,13 +4964,13 @@ let sha512 = "zdu8XMNEDepKKR+XYOXAVPtWui0ly0NtohUscw+UmaHiAWT8hrV1rr//H6V+0DvJ3OQ19S979M0laLfX8rm82Q=="; }; }; - "typescript-4.2.4" = { + "typescript-4.3.2" = { name = "typescript"; packageName = "typescript"; - version = "4.2.4"; + version = "4.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-4.2.4.tgz"; - sha512 = "V+evlYHZnQkaz8TRBuxTA92yZBPotr5H+WhQ7bD3hZUndx5tGOa1fuCgeSjxAzM1RiN5IzvadIXTVefuuwZCRg=="; + url = "https://registry.npmjs.org/typescript/-/typescript-4.3.2.tgz"; + sha512 = "zZ4hShnmnoVnAHpVHWpTcxdv7dWP60S2FsydQLV8V5PbS3FifjWFFRiHSWpDJahly88PRyV5teTSLoq4eG7mKw=="; }; }; "undefsafe-2.0.3" = { @@ -5183,18 +5309,18 @@ let }; in { - "matrix-appservice-irc-git+https://github.com/matrix-org/matrix-appservice-irc.git#0.26.0" = nodeEnv.buildNodePackage { + "matrix-appservice-irc-git+https://github.com/matrix-org/matrix-appservice-irc.git#0.26.1" = nodeEnv.buildNodePackage { name = "matrix-appservice-irc"; packageName = "matrix-appservice-irc"; - version = "0.26.0"; + version = "0.26.1"; src = fetchgit { url = "https://github.com/matrix-org/matrix-appservice-irc.git"; - rev = "6117f33202e616f6c9dffae0543c8044213100fb"; - sha256 = "98c049b895b1b4102fe43f5b5f5a0b2d650d56064e64b03f56defb55df3fbb96"; + rev = "4edab6f7b02e0f08e7c3b24f72441be25b30b5b8"; + sha256 = "3715ba3e80d79cea98ceb108e1df87b4d864d4f9149f147df0f3b78c691f00d6"; }; dependencies = [ sources."@babel/code-frame-7.12.11" - (sources."@babel/generator-7.14.2" // { + (sources."@babel/generator-7.14.3" // { dependencies = [ sources."source-map-0.5.7" ]; @@ -5214,7 +5340,7 @@ in sources."supports-color-5.5.0" ]; }) - sources."@babel/parser-7.14.2" + sources."@babel/parser-7.14.4" sources."@babel/runtime-7.14.0" (sources."@babel/template-7.12.13" // { dependencies = [ @@ -5227,18 +5353,17 @@ in sources."globals-11.12.0" ]; }) - sources."@babel/types-7.14.2" + sources."@babel/types-7.14.4" sources."@dabh/diagnostics-2.0.2" - (sources."@eslint/eslintrc-0.4.1" // { + (sources."@eslint/eslintrc-0.4.2" // { dependencies = [ - sources."globals-12.4.0" sources."ignore-4.0.6" sources."strip-json-comments-3.1.1" ]; }) - sources."@nodelib/fs.scandir-2.1.4" - sources."@nodelib/fs.stat-2.0.4" - sources."@nodelib/fs.walk-1.2.6" + sources."@nodelib/fs.scandir-2.1.5" + sources."@nodelib/fs.stat-2.0.5" + sources."@nodelib/fs.walk-1.2.7" sources."@sentry/core-5.30.0" sources."@sentry/hub-5.30.0" sources."@sentry/minimal-5.30.0" @@ -5248,42 +5373,47 @@ in sources."@sentry/utils-5.30.0" sources."@sindresorhus/is-0.14.0" sources."@szmarczak/http-timer-1.1.2" - sources."@types/bluebird-3.5.34" + sources."@types/bluebird-3.5.35" sources."@types/body-parser-1.19.0" sources."@types/connect-3.4.34" - sources."@types/express-4.17.11" - sources."@types/express-serve-static-core-4.17.19" + sources."@types/express-4.17.12" + sources."@types/express-serve-static-core-4.17.21" sources."@types/extend-3.0.1" sources."@types/he-1.1.1" sources."@types/json-schema-7.0.7" sources."@types/mime-1.3.2" sources."@types/nedb-1.8.11" - sources."@types/node-15.0.3" + sources."@types/node-15.12.2" sources."@types/nopt-3.0.29" - sources."@types/pg-7.14.11" + sources."@types/pg-8.6.0" sources."@types/qs-6.9.6" sources."@types/range-parser-1.2.3" - sources."@types/sanitize-html-1.27.2" + (sources."@types/sanitize-html-2.3.1" // { + dependencies = [ + sources."domhandler-4.2.0" + sources."htmlparser2-6.1.0" + ]; + }) sources."@types/serve-static-1.13.9" - (sources."@typescript-eslint/eslint-plugin-4.23.0" // { + (sources."@typescript-eslint/eslint-plugin-4.26.1" // { dependencies = [ sources."lru-cache-6.0.0" sources."semver-7.3.5" sources."yallist-4.0.0" ]; }) - sources."@typescript-eslint/experimental-utils-4.23.0" - sources."@typescript-eslint/parser-4.23.0" - sources."@typescript-eslint/scope-manager-4.23.0" - sources."@typescript-eslint/types-4.23.0" - (sources."@typescript-eslint/typescript-estree-4.23.0" // { + sources."@typescript-eslint/experimental-utils-4.26.1" + sources."@typescript-eslint/parser-4.26.1" + sources."@typescript-eslint/scope-manager-4.26.1" + sources."@typescript-eslint/types-4.26.1" + (sources."@typescript-eslint/typescript-estree-4.26.1" // { dependencies = [ sources."lru-cache-6.0.0" sources."semver-7.3.5" sources."yallist-4.0.0" ]; }) - sources."@typescript-eslint/visitor-keys-4.23.0" + sources."@typescript-eslint/visitor-keys-4.26.1" sources."abbrev-1.1.1" sources."accepts-1.3.7" sources."acorn-7.4.1" @@ -5355,6 +5485,7 @@ in sources."camelcase-5.3.1" sources."caseless-0.12.0" sources."chalk-4.1.1" + sources."chardet-1.3.0" sources."chokidar-3.5.1" sources."ci-info-2.0.0" sources."cli-boxes-2.2.1" @@ -5373,6 +5504,7 @@ in sources."color-convert-2.0.1" sources."color-name-1.1.4" sources."color-string-1.5.5" + sources."colorette-1.2.2" sources."colors-1.4.0" sources."colorspace-1.1.2" sources."combined-stream-1.0.8" @@ -5399,6 +5531,7 @@ in sources."decompress-response-3.3.0" sources."deep-extend-0.6.0" sources."deep-is-0.1.3" + sources."deepmerge-4.2.2" sources."default-require-extensions-2.0.0" sources."defer-to-connect-1.1.3" sources."delayed-stream-1.0.0" @@ -5406,14 +5539,14 @@ in sources."destroy-1.0.4" sources."dir-glob-3.0.1" sources."doctrine-3.0.0" - (sources."dom-serializer-1.3.1" // { + (sources."dom-serializer-1.3.2" // { dependencies = [ sources."domhandler-4.2.0" ]; }) sources."domelementtype-2.2.0" sources."domhandler-3.3.0" - (sources."domutils-2.6.0" // { + (sources."domutils-2.7.0" // { dependencies = [ sources."domhandler-4.2.0" ]; @@ -5437,9 +5570,15 @@ in sources."escape-goat-2.1.1" sources."escape-html-1.0.3" sources."escape-string-regexp-2.0.0" - (sources."eslint-7.26.0" // { + (sources."eslint-7.28.0" // { dependencies = [ sources."ansi-regex-5.0.0" + sources."escape-string-regexp-4.0.0" + (sources."eslint-utils-2.1.0" // { + dependencies = [ + sources."eslint-visitor-keys-1.3.0" + ]; + }) sources."ignore-4.0.6" sources."lru-cache-6.0.0" sources."semver-7.3.5" @@ -5449,11 +5588,7 @@ in ]; }) sources."eslint-scope-5.1.1" - (sources."eslint-utils-2.1.0" // { - dependencies = [ - sources."eslint-visitor-keys-1.3.0" - ]; - }) + sources."eslint-utils-3.0.0" sources."eslint-visitor-keys-2.1.0" (sources."espree-7.3.1" // { dependencies = [ @@ -5521,7 +5656,7 @@ in }) sources."forever-agent-0.6.1" sources."form-data-2.3.3" - sources."forwarded-0.1.2" + sources."forwarded-0.2.0" sources."fresh-0.5.2" sources."fs.realpath-1.0.0" sources."fsevents-2.3.2" @@ -5537,7 +5672,7 @@ in sources."glob-parent-5.1.2" sources."glob-to-regexp-0.4.1" sources."global-dirs-2.1.0" - (sources."globals-13.8.0" // { + (sources."globals-13.9.0" // { dependencies = [ sources."type-fest-0.20.2" ]; @@ -5595,6 +5730,7 @@ in sources."is-obj-2.0.0" sources."is-object-1.0.2" sources."is-path-inside-3.0.3" + sources."is-plain-object-5.0.0" sources."is-promise-2.2.2" sources."is-property-1.0.2" sources."is-stream-2.0.0" @@ -5641,6 +5777,7 @@ in sources."jsonpointer-4.1.0" sources."jsprim-1.4.1" sources."keyv-3.1.0" + sources."klona-2.0.4" sources."kuler-2.0.0" sources."latest-version-5.1.0" sources."levn-0.4.1" @@ -5651,6 +5788,7 @@ in sources."lodash-4.17.21" sources."lodash.clonedeep-4.5.0" sources."lodash.flattendeep-4.4.0" + sources."lodash.merge-4.6.2" sources."lodash.truncate-4.4.2" sources."logform-2.2.0" sources."loglevel-1.7.1" @@ -5664,7 +5802,7 @@ in ]; }) sources."matrix-appservice-0.8.0" - (sources."matrix-appservice-bridge-2.6.0" // { + (sources."matrix-appservice-bridge-2.6.1" // { dependencies = [ sources."argparse-2.0.1" sources."extend-3.0.2" @@ -5675,6 +5813,7 @@ in (sources."matrix-bot-sdk-0.4.0" // { dependencies = [ sources."chalk-3.0.0" + sources."sanitize-html-1.27.5" ]; }) (sources."matrix-js-sdk-9.11.0" // { @@ -5683,6 +5822,11 @@ in ]; }) sources."matrix-lastactive-0.1.5" + (sources."matrix-org-irc-1.0.0-alpha4" // { + dependencies = [ + sources."iconv-lite-0.6.3" + ]; + }) sources."media-typer-0.3.0" sources."merge-descriptors-1.0.1" sources."merge-source-map-1.1.0" @@ -5690,8 +5834,8 @@ in sources."methods-1.1.2" sources."micromatch-4.0.4" sources."mime-1.6.0" - sources."mime-db-1.47.0" - sources."mime-types-2.1.30" + sources."mime-db-1.48.0" + sources."mime-types-2.1.31" sources."mimic-response-1.0.1" sources."minimalistic-assert-1.0.1" sources."minimatch-3.0.4" @@ -5708,6 +5852,7 @@ in }) sources."ms-2.1.2" sources."nan-2.14.2" + sources."nanoid-3.1.23" sources."natural-compare-1.4.0" sources."nedb-1.8.0" sources."negotiator-0.6.2" @@ -5723,7 +5868,7 @@ in sources."nopt-3.0.6" sources."normalize-package-data-2.5.0" sources."normalize-path-3.0.0" - sources."normalize-url-4.5.0" + sources."normalize-url-4.5.1" (sources."nyc-14.1.1" // { dependencies = [ sources."make-dir-2.1.0" @@ -5732,7 +5877,7 @@ in ]; }) sources."oauth-sign-0.9.0" - sources."object-hash-2.1.1" + sources."object-hash-2.2.0" sources."object-inspect-1.10.3" sources."on-finished-2.3.0" sources."on-headers-1.0.2" @@ -5762,7 +5907,7 @@ in sources."path-exists-3.0.0" sources."path-is-absolute-1.0.1" sources."path-key-3.1.1" - sources."path-parse-1.0.6" + sources."path-parse-1.0.7" sources."path-to-regexp-0.1.7" sources."path-type-4.0.0" sources."performance-now-2.1.0" @@ -5773,7 +5918,7 @@ in sources."pg-protocol-1.5.0" sources."pg-types-2.2.0" sources."pgpass-1.0.4" - sources."picomatch-2.2.3" + sources."picomatch-2.3.0" sources."pify-3.0.0" sources."pkg-dir-3.0.0" (sources."postcss-7.0.35" // { @@ -5800,7 +5945,7 @@ in sources."process-nextick-args-2.0.1" sources."progress-2.0.3" sources."prom-client-13.1.0" - sources."proxy-addr-2.0.6" + sources."proxy-addr-2.0.7" (sources."proxyquire-1.8.0" // { dependencies = [ sources."resolve-1.1.7" @@ -5852,7 +5997,14 @@ in sources."run-parallel-1.2.0" sources."safe-buffer-5.1.2" sources."safer-buffer-2.1.2" - sources."sanitize-html-1.27.5" + (sources."sanitize-html-2.4.0" // { + dependencies = [ + sources."domhandler-4.2.0" + sources."escape-string-regexp-4.0.0" + sources."htmlparser2-6.1.0" + sources."postcss-8.3.0" + ]; + }) sources."semver-5.7.1" (sources."semver-diff-3.1.1" // { dependencies = [ @@ -5884,6 +6036,7 @@ in ]; }) sources."source-map-0.6.1" + sources."source-map-js-0.6.2" (sources."spawn-wrap-1.4.3" // { dependencies = [ sources."rimraf-2.7.1" @@ -5893,7 +6046,7 @@ in sources."spdx-correct-3.1.1" sources."spdx-exceptions-2.3.0" sources."spdx-expression-parse-3.0.1" - sources."spdx-license-ids-3.0.7" + sources."spdx-license-ids-3.0.9" sources."split2-3.2.2" sources."sprintf-js-1.0.3" sources."sshpk-1.16.1" @@ -5918,9 +6071,9 @@ in sources."strip-bom-3.0.0" sources."strip-json-comments-2.0.1" sources."supports-color-7.2.0" - (sources."table-6.7.0" // { + (sources."table-6.7.1" // { dependencies = [ - sources."ajv-8.3.0" + sources."ajv-8.6.0" sources."ansi-regex-5.0.0" sources."json-schema-traverse-1.0.0" sources."strip-ansi-6.0.0" @@ -5950,7 +6103,7 @@ in sources."type-fest-0.8.1" sources."type-is-1.6.18" sources."typedarray-to-buffer-3.1.5" - sources."typescript-4.2.4" + sources."typescript-4.3.2" (sources."undefsafe-2.0.3" // { dependencies = [ sources."debug-2.6.9" diff --git a/third_party/nixpkgs/pkgs/servers/matrix-synapse/matrix-appservice-irc/package.json b/third_party/nixpkgs/pkgs/servers/matrix-synapse/matrix-appservice-irc/package.json index 0e6da99fdf..ae1326275a 100644 --- a/third_party/nixpkgs/pkgs/servers/matrix-synapse/matrix-appservice-irc/package.json +++ b/third_party/nixpkgs/pkgs/servers/matrix-synapse/matrix-appservice-irc/package.json @@ -1,3 +1,3 @@ [ - {"matrix-appservice-irc": "git+https://github.com/matrix-org/matrix-appservice-irc.git#0.26.0" } + {"matrix-appservice-irc": "git+https://github.com/matrix-org/matrix-appservice-irc.git#0.26.1" } ] diff --git a/third_party/nixpkgs/pkgs/servers/matrix-synapse/tools/synadm.nix b/third_party/nixpkgs/pkgs/servers/matrix-synapse/tools/synadm.nix index b9a0ff3acd..76f5106c08 100644 --- a/third_party/nixpkgs/pkgs/servers/matrix-synapse/tools/synadm.nix +++ b/third_party/nixpkgs/pkgs/servers/matrix-synapse/tools/synadm.nix @@ -12,6 +12,11 @@ with python3Packages; buildPythonApplication rec { sha256 = "1vy30nwsns4jnv0s5i9jpyplxpclgwyw0gldpywv4z3fljs0lzik"; }; + postPatch = '' + substituteInPlace setup.py \ + --replace "Click>=7.0,<8.0" "Click" + ''; + propagatedBuildInputs = [ click click-option-group diff --git a/third_party/nixpkgs/pkgs/servers/mautrix-signal/default.nix b/third_party/nixpkgs/pkgs/servers/mautrix-signal/default.nix index c39394879f..c7dc3ecad5 100644 --- a/third_party/nixpkgs/pkgs/servers/mautrix-signal/default.nix +++ b/third_party/nixpkgs/pkgs/servers/mautrix-signal/default.nix @@ -1,6 +1,18 @@ -{ lib, python3Packages, fetchFromGitHub }: +{ lib, python3, fetchFromGitHub }: -python3Packages.buildPythonPackage rec { +let + python = python3.override { + packageOverrides = self: super: { + mautrix = super.mautrix.overridePythonAttrs (oldAttrs: rec { + version = "0.8.18"; + src = oldAttrs.src.override { + inherit version; + sha256 = "32daf7a7dcf5d4013b37321df7b319f36523f38884ccc3e2e965917d0a5c73c1"; + }; + }); + }; + }; +in python.pkgs.buildPythonPackage rec { pname = "mautrix-signal"; version = "0.1.1"; @@ -11,7 +23,7 @@ python3Packages.buildPythonPackage rec { sha256 = "11snsl7i407855h39g1fgk26hinnq0inr8sjrgd319li0d3jwzxl"; }; - propagatedBuildInputs = with python3Packages; [ + propagatedBuildInputs = with python.pkgs; [ CommonMark aiohttp asyncpg @@ -41,7 +53,7 @@ python3Packages.buildPythonPackage rec { " > $out/bin/mautrix-signal chmod +x $out/bin/mautrix-signal wrapProgram $out/bin/mautrix-signal \ - --set PATH ${python3Packages.python}/bin \ + --set PATH ${python}/bin \ --set PYTHONPATH "$PYTHONPATH" ''; diff --git a/third_party/nixpkgs/pkgs/servers/mautrix-telegram/default.nix b/third_party/nixpkgs/pkgs/servers/mautrix-telegram/default.nix index bf00462875..f54657db38 100644 --- a/third_party/nixpkgs/pkgs/servers/mautrix-telegram/default.nix +++ b/third_party/nixpkgs/pkgs/servers/mautrix-telegram/default.nix @@ -1,24 +1,34 @@ { lib, python3, mautrix-telegram, fetchFromGitHub }: -with python3.pkgs; - let + python = python3.override { + packageOverrides = self: super: { + sqlalchemy = super.sqlalchemy.overridePythonAttrs (oldAttrs: rec { + version = "1.3.24"; + src = oldAttrs.src.override { + inherit version; + sha256 = "ebbb777cbf9312359b897bf81ba00dae0f5cb69fba2a18265dcc18a6f5ef7519"; + }; + }); + }; + }; + # officially supported database drivers - dbDrivers = [ + dbDrivers = with python.pkgs; [ psycopg2 # sqlite driver is already shipped with python by default ]; -in buildPythonPackage rec { +in python.pkgs.buildPythonPackage rec { pname = "mautrix-telegram"; - version = "0.9.0"; - disabled = pythonOlder "3.7"; + version = "0.10.0"; + disabled = python.pythonOlder "3.7"; src = fetchFromGitHub { owner = "tulir"; repo = pname; rev = "v${version}"; - sha256 = "1543ljjl3jg3ayid7ifi4bamqh4gq85pmlbs3m8i7phjbbm7g9dn"; + sha256 = "sha256-lLVKD+/pKqs8oWBdyL+R1lk22LqQOC9nbMlxhCK39xA="; }; patches = [ ./0001-Re-add-entrypoint.patch ./0002-Don-t-depend-on-pytest-runner.patch ]; @@ -26,7 +36,7 @@ in buildPythonPackage rec { sed -i -e '/alembic>/d' requirements.txt ''; - propagatedBuildInputs = [ + propagatedBuildInputs = with python.pkgs; [ Mako aiohttp mautrix @@ -47,7 +57,7 @@ in buildPythonPackage rec { # # Hence we need to patch away `alembic` from `mautrix-telegram` and create an `alembic` # which has `mautrix-telegram` in its environment. - passthru.alembic = alembic.overrideAttrs (old: { + passthru.alembic = python.pkgs.alembic.overrideAttrs (old: { propagatedBuildInputs = old.propagatedBuildInputs ++ dbDrivers ++ [ mautrix-telegram ]; @@ -59,7 +69,7 @@ in buildPythonPackage rec { # The tests were touched the last time in 2019 and upstream CI doesn't even build # those, so it's safe to assume that this part of the software is abandoned. doCheck = false; - checkInputs = [ + checkInputs = with python.pkgs; [ pytest pytest-mock pytest-asyncio diff --git a/third_party/nixpkgs/pkgs/servers/mautrix-whatsapp/default.nix b/third_party/nixpkgs/pkgs/servers/mautrix-whatsapp/default.nix index 934ce797d5..a5b2f14e9d 100644 --- a/third_party/nixpkgs/pkgs/servers/mautrix-whatsapp/default.nix +++ b/third_party/nixpkgs/pkgs/servers/mautrix-whatsapp/default.nix @@ -2,18 +2,18 @@ buildGoModule rec { pname = "mautrix-whatsapp"; - version = "0.1.6"; + version = "0.1.7"; src = fetchFromGitHub { owner = "tulir"; repo = "mautrix-whatsapp"; rev = "v${version}"; - sha256 = "sha256-0nwE3+GkJAvz5s8G23TvLVO8ykQK0ZIwEWAaTWHHOuU="; + sha256 = "sha256-PXahSrA+jBWreFhqCp1Ar9yYfIJGJfU2xH88Ax3fdkE="; }; buildInputs = [ olm ]; - vendorSha256 = "sha256-FRXG0HmYfum9G/LYm6oWLLx1ZYQ3Jq7qV/mq6ofN9f5="; + vendorSha256 = "sha256-Iscojrn6wVnweOQV1GvhZ4QjUdTfDLOsCP1hVR4u/b4="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/servers/miniflux/default.nix b/third_party/nixpkgs/pkgs/servers/miniflux/default.nix index e69014c4f4..f66468b240 100644 --- a/third_party/nixpkgs/pkgs/servers/miniflux/default.nix +++ b/third_party/nixpkgs/pkgs/servers/miniflux/default.nix @@ -2,7 +2,7 @@ let pname = "miniflux"; - version = "2.0.29"; + version = "2.0.31"; in buildGoModule { inherit pname version; @@ -11,10 +11,10 @@ in buildGoModule { owner = pname; repo = pname; rev = version; - sha256 = "sha256-8FfI9TPtIoQ/D5AdKRy7fq/eGZ6ha8z0tqBnWcziMTA="; + sha256 = "sha256-01v5gwUv0SfX/9AJgo4HiBcmoCfQbnKIGcS26IebU2Q="; }; - vendorSha256 = "sha256-y7w+SHy0yPws365PKJeRStZS3Y5vjyPWHK3w84VvJsI="; + vendorSha256 = "sha256-69iTdrjgBmJHeVa8Tq47clQR5Xhy4rWcp2OwS4nIw/c="; nativeBuildInputs = [ installShellFiles ]; diff --git a/third_party/nixpkgs/pkgs/servers/misc/gobgpd/default.nix b/third_party/nixpkgs/pkgs/servers/misc/gobgpd/default.nix index c747e5266a..450e454374 100644 --- a/third_party/nixpkgs/pkgs/servers/misc/gobgpd/default.nix +++ b/third_party/nixpkgs/pkgs/servers/misc/gobgpd/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "gobgpd"; - version = "2.27.0"; + version = "2.28.0"; src = fetchFromGitHub { owner = "osrg"; repo = "gobgp"; rev = "v${version}"; - sha256 = "sha256-Ofg+z8wUttqM1THatPFi0cuyLSEryhTmg3JC1o+16eA="; + sha256 = "sha256-AlAfs1wi3hS7cqAtGqfUgv5CIonu7TmXWgxL1zSBh54="; }; vendorSha256 = "sha256-PWm7XnO6LPaU8g8ymmqRkQv2KSX9kLv9RVaa000mrTY="; diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/alertmanager-irc-relay/default.nix b/third_party/nixpkgs/pkgs/servers/monitoring/alertmanager-irc-relay/default.nix index 50cf5a0016..f5d4f6ca88 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/alertmanager-irc-relay/default.nix +++ b/third_party/nixpkgs/pkgs/servers/monitoring/alertmanager-irc-relay/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "alertmanager-irc-relay"; - version = "0.4.1"; + version = "0.4.2"; src = fetchFromGitHub { owner = "google"; repo = "alertmanager-irc-relay"; rev = "v${version}"; - sha256 = "sha256-02uEvcxT5+0OJtqOyuQjgkqL0fZnN7umCSxBqAVPT9U="; + sha256 = "sha256-/gZeIJN7xkDe7f+Q7zh16KG6RC+G/9MIPm3KQManVZ0="; }; vendorSha256 = "sha256-VLG15IXS/fXFMTCJKEqGW6qZ9aOLPhazidVsOywG+w4="; diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/grafana-agent/default.nix b/third_party/nixpkgs/pkgs/servers/monitoring/grafana-agent/default.nix index 1f08dc3344..41b8b56fc4 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/grafana-agent/default.nix +++ b/third_party/nixpkgs/pkgs/servers/monitoring/grafana-agent/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "grafana-agent"; - version = "0.13.1"; + version = "0.15.0"; src = fetchFromGitHub { rev = "v${version}"; owner = "grafana"; repo = "agent"; - sha256 = "sha256-ySdBHlUSGIyhMwInoFT90mm+HfAkO/60wBPACQgxDAM="; + sha256 = "sha256-mRDd9G/VMbDwp/GYPoUE0v9j+BmUd08wOMJjgcg2qdo="; }; - vendorSha256 = null; + vendorSha256 = "sha256-sQFWdBOjfYb1e7ZzHGgtgnuEQCU4xnkJTyzC/9DRcYs="; # uses go-systemd, which uses libsystemd headers # https://github.com/coreos/go-systemd/issues/351 diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/default.nix b/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/default.nix index 27013c2a77..fab8d4b009 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/default.nix +++ b/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/default.nix @@ -10,13 +10,13 @@ mkYarnPackage rec { name = "grafana-image-renderer"; - version = "2.1.0"; + version = "3.0.0"; src = fetchFromGitHub { owner = "grafana"; repo = "grafana-image-renderer"; rev = "v${version}"; - sha256 = "sha256-loWLbeu8h0fhMcUzmeYVSw4x6R0GVfqwb/vHwCNT/fM="; + sha256 = "sha256-wg+cMAMqj4JORh5LPJnNELgsJYAxVgz2YPOl87WWda4="; }; buildPhase = '' diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/package.json b/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/package.json index 36f9a32976..c1db7f8618 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/package.json +++ b/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/package.json @@ -21,6 +21,7 @@ "@grpc/grpc-js": "^1.0", "@grpc/proto-loader": "^0.5.4", "@hapi/boom": "^9.1.0", + "chokidar": "^3.5.1", "eslint": "^7.13.0", "express": "^4.16.3", "express-prom-bundle": "^5.1.5", diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/yarn.lock b/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/yarn.lock index cf769ed592..80fd4569e6 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/yarn.lock +++ b/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/yarn.lock @@ -373,6 +373,14 @@ any-observable@^0.3.0: resolved "https://registry.yarnpkg.com/any-observable/-/any-observable-0.3.0.tgz#af933475e5806a67d0d7df090dd5e8bef65d119b" integrity sha512-/FQM1EDkTsf63Ub2C6O7GuYFDsSXUwsaZDurV0np41ocwq0jthUAYCmhBX9f+KwlaCgIuWyr/4WlUQUBfKfZog== +anymatch@~3.1.1: + version "3.1.2" + resolved "https://registry.yarnpkg.com/anymatch/-/anymatch-3.1.2.tgz#c0557c096af32f106198f4f4e2a383537e378716" + integrity sha512-P43ePfOAIupkguHUycrc4qJ9kz8ZiuOUijaETwX7THt0Y/GNK7v0aa8rY816xWjZ7rJdA5XdMcpVFTKMq+RvWg== + dependencies: + normalize-path "^3.0.0" + picomatch "^2.0.4" + aproba@^1.0.3: version "1.2.0" resolved "https://registry.yarnpkg.com/aproba/-/aproba-1.2.0.tgz#6802e6264efd18c790a1b0d517f0f2627bf2c94a" @@ -442,6 +450,11 @@ basic-auth@~2.0.1: dependencies: safe-buffer "5.1.2" +binary-extensions@^2.0.0: + version "2.2.0" + resolved "https://registry.yarnpkg.com/binary-extensions/-/binary-extensions-2.2.0.tgz#75f502eeaf9ffde42fc98829645be4ea76bd9e2d" + integrity sha512-jDctJ/IVQbZoJykoeHbhXpOlNBqGNcwXJKJog42E5HDPUwQTSdjCHdihjj0DlnheQ7blbT6dHOafNAiS8ooQKA== + bintrees@1.0.1: version "1.0.1" resolved "https://registry.yarnpkg.com/bintrees/-/bintrees-1.0.1.tgz#0e655c9b9c2435eaab68bf4027226d2b55a34524" @@ -480,7 +493,7 @@ brace-expansion@^1.1.7: balanced-match "^1.0.0" concat-map "0.0.1" -braces@^3.0.1: +braces@^3.0.1, braces@~3.0.2: version "3.0.2" resolved "https://registry.yarnpkg.com/braces/-/braces-3.0.2.tgz#3454e1a462ee8d599e236df336cd9ea4f8afe107" integrity sha512-b8um+L1RzM3WDSzvhm6gIz1yfTbBt6YTlcEKAvsmqCZZFw46z626lVj9j1yEPW33H5H+lBQpZMP1k8l+78Ha0A== @@ -557,6 +570,21 @@ chalk@^4.0.0, chalk@^4.1.0: ansi-styles "^4.1.0" supports-color "^7.1.0" +chokidar@^3.5.1: + version "3.5.1" + resolved "https://registry.yarnpkg.com/chokidar/-/chokidar-3.5.1.tgz#ee9ce7bbebd2b79f49f304799d5468e31e14e68a" + integrity sha512-9+s+Od+W0VJJzawDma/gvBNQqkTiqYTWLuZoyAsivsI4AaWTCzHG06/TMjsf1cYe9Cb97UCEhjz7HvnPk2p/tw== + dependencies: + anymatch "~3.1.1" + braces "~3.0.2" + glob-parent "~5.1.0" + is-binary-path "~2.1.0" + is-glob "~4.0.1" + normalize-path "~3.0.0" + readdirp "~3.5.0" + optionalDependencies: + fsevents "~2.3.1" + chownr@^1.1.1: version "1.1.4" resolved "https://registry.yarnpkg.com/chownr/-/chownr-1.1.4.tgz#6fc9d7b42d32a583596337666e7d08084da2cc6b" @@ -1281,6 +1309,11 @@ fs.realpath@^1.0.0: resolved "https://registry.yarnpkg.com/fs.realpath/-/fs.realpath-1.0.0.tgz#1504ad2523158caa40db4a2787cb01411994ea4f" integrity sha1-FQStJSMVjKpA20onh8sBQRmU6k8= +fsevents@~2.3.1: + version "2.3.2" + resolved "https://registry.yarnpkg.com/fsevents/-/fsevents-2.3.2.tgz#8a526f78b8fdf4623b709e0b975c52c24c02fd1a" + integrity sha512-xiqMQR4xAeHTuB9uWm+fFRcIOgKBMiOBP+eXiyT7jsgVCq1bkVygt00oASowB7EdtpOHaaPgKt812P9ab+DDKA== + function-bind@^1.1.1: version "1.1.1" resolved "https://registry.yarnpkg.com/function-bind/-/function-bind-1.1.1.tgz#a56899d3ea3c9bab874bb9773b7c5ede92f4895d" @@ -1327,7 +1360,7 @@ github-from-package@0.0.0: resolved "https://registry.yarnpkg.com/github-from-package/-/github-from-package-0.0.0.tgz#97fb5d96bfde8973313f20e8288ef9a167fa64ce" integrity sha1-l/tdlr/eiXMxPyDoKI75oWf6ZM4= -glob-parent@^5.0.0, glob-parent@^5.1.0: +glob-parent@^5.0.0, glob-parent@^5.1.0, glob-parent@~5.1.0: version "5.1.2" resolved "https://registry.yarnpkg.com/glob-parent/-/glob-parent-5.1.2.tgz#869832c58034fe68a4093c17dc15e8340d8401c4" integrity sha512-AOIgSQCepiJYwP3ARnGx+5VnTu2HBYdzbGP45eLw1vr3zB3vZLeyed1sC9hnbcOc9/SrMyM5RPQrkGz4aS9Zow== @@ -1570,6 +1603,13 @@ is-arrayish@^0.3.1: resolved "https://registry.yarnpkg.com/is-arrayish/-/is-arrayish-0.3.2.tgz#4574a2ae56f7ab206896fb431eaeed066fdf8f03" integrity sha512-eVRqCvVlZbuw3GrM63ovNSNAeA1K16kaR/LRY/92w0zxQ5/1YzwblUX652i4Xs9RwAGjW9d9y6X88t8OaAJfWQ== +is-binary-path@~2.1.0: + version "2.1.0" + resolved "https://registry.yarnpkg.com/is-binary-path/-/is-binary-path-2.1.0.tgz#ea1f7f3b80f064236e83470f86c09c254fb45b09" + integrity sha512-ZMERYes6pDydyuGidse7OsHxtbI7WVeUEozgR/g7rd0xUimYNlvZRE/K2MgZTjWy725IfelLeVcEM97mmtRGXw== + dependencies: + binary-extensions "^2.0.0" + is-core-module@^2.2.0: version "2.3.0" resolved "https://registry.yarnpkg.com/is-core-module/-/is-core-module-2.3.0.tgz#d341652e3408bca69c4671b79a0954a3d349f887" @@ -1604,7 +1644,7 @@ is-fullwidth-code-point@^3.0.0: resolved "https://registry.yarnpkg.com/is-fullwidth-code-point/-/is-fullwidth-code-point-3.0.0.tgz#f116f8064fe90b3f7844a38997c0b75051269f1d" integrity sha512-zymm5+u+sCsSWyD9qNaejV3DFvhCKclKdizYaJUuHA83RLjb7nSuGnddCHGv0hk+KY7BMAlsWeK4Ueg6EV6XQg== -is-glob@^4.0.0, is-glob@^4.0.1: +is-glob@^4.0.0, is-glob@^4.0.1, is-glob@~4.0.1: version "4.0.1" resolved "https://registry.yarnpkg.com/is-glob/-/is-glob-4.0.1.tgz#7567dbe9f2f5e2467bc77ab83c4a29482407a5dc" integrity sha512-5G0tKtBTFImOqDnLB2hG6Bp2qcKEFduo4tZu9MT/H6NQv/ghhy30o55ufafxJ/LdH79LLs2Kfrn85TLKyA7BUg== @@ -2046,7 +2086,7 @@ noop-logger@^0.1.1: resolved "https://registry.yarnpkg.com/noop-logger/-/noop-logger-0.1.1.tgz#94a2b1633c4f1317553007d8966fd0e841b6a4c2" integrity sha1-lKKxYzxPExdVMAfYlm/Q6EG2pMI= -normalize-path@^3.0.0: +normalize-path@^3.0.0, normalize-path@~3.0.0: version "3.0.0" resolved "https://registry.yarnpkg.com/normalize-path/-/normalize-path-3.0.0.tgz#0dcd69ff23a1c9b11fd0978316644a0388216a65" integrity sha512-6eZs5Ls3WtCisHWp9S2GUy8dqkpGi4BVSz3GaqiE6ezub0512ESztXUwUB6C6IKbQkY2Pnb/mD4WYojCRwcwLA== @@ -2229,9 +2269,9 @@ path-key@^3.0.0, path-key@^3.1.0: integrity sha512-ojmeN0qd+y0jszEtoY48r0Peq5dwMEkIlCOu6Q5f41lfkswXuKtYrhgoTpLnyIcHm24Uhqx+5Tqm2InSwLhE6Q== path-parse@^1.0.6: - version "1.0.6" - resolved "https://registry.yarnpkg.com/path-parse/-/path-parse-1.0.6.tgz#d62dbb5679405d72c4737ec58600e9ddcf06d24c" - integrity sha512-GSmOT2EbHrINBf9SR7CDELwlJ8AENk3Qn7OikK4nFYAu3Ote2+JYNVvkpAEQm3/TLNEJFD/xZJjzyxg3KBWOzw== + version "1.0.7" + resolved "https://registry.yarnpkg.com/path-parse/-/path-parse-1.0.7.tgz#fbc114b60ca42b30d9daf5858e4bd68bbedb6735" + integrity sha512-LDJzPVEEEPR+y48z93A0Ed0yXb8pAByGWo/k5YYdYgpY2/2EsOsksJrq7lOHxryrVOn1ejG6oAp8ahvOIQD8sw== path-to-regexp@0.1.7: version "0.1.7" @@ -2255,7 +2295,7 @@ pend@~1.2.0: resolved "https://registry.yarnpkg.com/pend/-/pend-1.2.0.tgz#7a57eb550a6783f9115331fcf4663d5c8e007a50" integrity sha1-elfrVQpng/kRUzH89GY9XI4AelA= -picomatch@^2.2.1, picomatch@^2.2.3: +picomatch@^2.0.4, picomatch@^2.2.1, picomatch@^2.2.3: version "2.2.3" resolved "https://registry.yarnpkg.com/picomatch/-/picomatch-2.2.3.tgz#465547f359ccc206d3c48e46a1bcb89bf7ee619d" integrity sha512-KpELjfwcCDUb9PeigTs2mBJzXUPzAuP2oPcA989He8Rte0+YUAjw1JVedDhuTKPkHjSYzMN3npC9luThGYEKdg== @@ -2492,6 +2532,13 @@ readable-stream@^3.1.1, readable-stream@^3.4.0, readable-stream@^3.6.0: string_decoder "^1.1.1" util-deprecate "^1.0.1" +readdirp@~3.5.0: + version "3.5.0" + resolved "https://registry.yarnpkg.com/readdirp/-/readdirp-3.5.0.tgz#9ba74c019b15d365278d2e91bb8c48d7b4d42c9e" + integrity sha512-cMhu7c/8rdhkHXWsY+osBhfSy0JikwpHK/5+imo+LpeasTF8ouErHrlYkwT0++njiyuDvc7OFY5T3ukvZ8qmFQ== + dependencies: + picomatch "^2.2.1" + regexpp@^3.1.0: version "3.1.0" resolved "https://registry.yarnpkg.com/regexpp/-/regexpp-3.1.0.tgz#206d0ad0a5648cffbdb8ae46438f3dc51c9f78e2" @@ -3129,9 +3176,9 @@ wrappy@1: integrity sha1-tSQ9jz7BqjXxNkYFvA0QNuMKtp8= ws@^7.2.3: - version "7.4.5" - resolved "https://registry.yarnpkg.com/ws/-/ws-7.4.5.tgz#a484dd851e9beb6fdb420027e3885e8ce48986c1" - integrity sha512-xzyu3hFvomRfXKH8vOFMU3OguG6oOvhXMo3xsGy3xWExqaM2dxBbVxuD99O7m3ZUFMvvscsZDqxfgMaRr/Nr1g== + version "7.4.6" + resolved "https://registry.yarnpkg.com/ws/-/ws-7.4.6.tgz#5654ca8ecdeee47c33a9a4bf6d28e2be2980377c" + integrity sha512-YmhHDO4MzaDLB+M9ym/mDA5z0naX8j7SIlT8f8z+I0VtzsRbekxEutHSme7NPS2qE8StCYQNUnfWdXta/Yu85A== y18n@^5.0.5: version "5.0.8" diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/yarn.nix b/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/yarn.nix index 53fbca36c2..7eb3a3bb8a 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/yarn.nix +++ b/third_party/nixpkgs/pkgs/servers/monitoring/grafana-image-renderer/yarn.nix @@ -457,6 +457,14 @@ sha1 = "af933475e5806a67d0d7df090dd5e8bef65d119b"; }; } + { + name = "anymatch___anymatch_3.1.2.tgz"; + path = fetchurl { + name = "anymatch___anymatch_3.1.2.tgz"; + url = "https://registry.yarnpkg.com/anymatch/-/anymatch-3.1.2.tgz"; + sha1 = "c0557c096af32f106198f4f4e2a383537e378716"; + }; + } { name = "aproba___aproba_1.2.0.tgz"; path = fetchurl { @@ -553,6 +561,14 @@ sha1 = "b998279bf47ce38344b4f3cf916d4679bbf51e3a"; }; } + { + name = "binary_extensions___binary_extensions_2.2.0.tgz"; + path = fetchurl { + name = "binary_extensions___binary_extensions_2.2.0.tgz"; + url = "https://registry.yarnpkg.com/binary-extensions/-/binary-extensions-2.2.0.tgz"; + sha1 = "75f502eeaf9ffde42fc98829645be4ea76bd9e2d"; + }; + } { name = "bintrees___bintrees_1.0.1.tgz"; path = fetchurl { @@ -673,6 +689,14 @@ sha1 = "c80b3fab28bf6371e6863325eee67e618b77e6ad"; }; } + { + name = "chokidar___chokidar_3.5.1.tgz"; + path = fetchurl { + name = "chokidar___chokidar_3.5.1.tgz"; + url = "https://registry.yarnpkg.com/chokidar/-/chokidar-3.5.1.tgz"; + sha1 = "ee9ce7bbebd2b79f49f304799d5468e31e14e68a"; + }; + } { name = "chownr___chownr_1.1.4.tgz"; path = fetchurl { @@ -1473,6 +1497,14 @@ sha1 = "1504ad2523158caa40db4a2787cb01411994ea4f"; }; } + { + name = "fsevents___fsevents_2.3.2.tgz"; + path = fetchurl { + name = "fsevents___fsevents_2.3.2.tgz"; + url = "https://registry.yarnpkg.com/fsevents/-/fsevents-2.3.2.tgz"; + sha1 = "8a526f78b8fdf4623b709e0b975c52c24c02fd1a"; + }; + } { name = "function_bind___function_bind_1.1.1.tgz"; path = fetchurl { @@ -1801,6 +1833,14 @@ sha1 = "4574a2ae56f7ab206896fb431eaeed066fdf8f03"; }; } + { + name = "is_binary_path___is_binary_path_2.1.0.tgz"; + path = fetchurl { + name = "is_binary_path___is_binary_path_2.1.0.tgz"; + url = "https://registry.yarnpkg.com/is-binary-path/-/is-binary-path-2.1.0.tgz"; + sha1 = "ea1f7f3b80f064236e83470f86c09c254fb45b09"; + }; + } { name = "is_core_module___is_core_module_2.3.0.tgz"; path = fetchurl { @@ -2626,11 +2666,11 @@ }; } { - name = "path_parse___path_parse_1.0.6.tgz"; + name = "path_parse___path_parse_1.0.7.tgz"; path = fetchurl { - name = "path_parse___path_parse_1.0.6.tgz"; - url = "https://registry.yarnpkg.com/path-parse/-/path-parse-1.0.6.tgz"; - sha1 = "d62dbb5679405d72c4737ec58600e9ddcf06d24c"; + name = "path_parse___path_parse_1.0.7.tgz"; + url = "https://registry.yarnpkg.com/path-parse/-/path-parse-1.0.7.tgz"; + sha1 = "fbc114b60ca42b30d9daf5858e4bd68bbedb6735"; }; } { @@ -2881,6 +2921,14 @@ sha1 = "337bbda3adc0706bd3e024426a286d4b4b2c9198"; }; } + { + name = "readdirp___readdirp_3.5.0.tgz"; + path = fetchurl { + name = "readdirp___readdirp_3.5.0.tgz"; + url = "https://registry.yarnpkg.com/readdirp/-/readdirp-3.5.0.tgz"; + sha1 = "9ba74c019b15d365278d2e91bb8c48d7b4d42c9e"; + }; + } { name = "regexpp___regexpp_3.1.0.tgz"; path = fetchurl { @@ -3658,11 +3706,11 @@ }; } { - name = "ws___ws_7.4.5.tgz"; + name = "ws___ws_7.4.6.tgz"; path = fetchurl { - name = "ws___ws_7.4.5.tgz"; - url = "https://registry.yarnpkg.com/ws/-/ws-7.4.5.tgz"; - sha1 = "a484dd851e9beb6fdb420027e3885e8ce48986c1"; + name = "ws___ws_7.4.6.tgz"; + url = "https://registry.yarnpkg.com/ws/-/ws-7.4.6.tgz"; + sha1 = "5654ca8ecdeee47c33a9a4bf6d28e2be2980377c"; }; } { diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/grafana/default.nix b/third_party/nixpkgs/pkgs/servers/monitoring/grafana/default.nix index 89e49671d8..99acc52b9d 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/grafana/default.nix +++ b/third_party/nixpkgs/pkgs/servers/monitoring/grafana/default.nix @@ -2,7 +2,7 @@ buildGoModule rec { pname = "grafana"; - version = "7.5.7"; + version = "8.0.3"; excludedPackages = [ "release_publisher" ]; @@ -10,32 +10,41 @@ buildGoModule rec { rev = "v${version}"; owner = "grafana"; repo = "grafana"; - sha256 = "sha256-GTQK02zxOBTE+93vT0zLMhAeZ7F3Cq/0lbvbzwB2QZA="; + sha256 = "sha256-GGtmsz3c7Q6mEGCJ6cdz2CjOW0ovZZW8j6LMfFgrMZ4="; }; srcStatic = fetchurl { url = "https://dl.grafana.com/oss/release/grafana-${version}.linux-amd64.tar.gz"; - sha256 = "sha256-IQ7aAuUrNa+bSh5ld6IttujM8AgKUSlu8H7pwzDi164="; + sha256 = "sha256-2x0FhKinrXAFenJcUDh4Q3RJNBrqixKBNZT7BZNNOj8="; }; - vendorSha256 = "sha256-AsPRaRLomp090XAKLXLXKm40ESPO4im9qi6VLpLYRQU="; + vendorSha256 = "sha256-x7sSVIim/TOhMTbnRK/fpgxiSRSO8KwGILTE2i1gU3U="; - # grafana-aws-sdk is specified with two versions which causes a problem later: - # go: inconsistent vendoring in /build/source: - # github.com/grafana/grafana-aws-sdk@v0.3.0: is explicitly required in go.mod, but not marked as explicit in vendor/modules.txt - # Remove the older one here to fix this. - postPatch = '' - substituteInPlace go.mod \ - --replace 'github.com/grafana/grafana-aws-sdk v0.3.0' "" + preBuild = '' + # The testcase makes an API call against grafana.com: + # + # --- Expected + # +++ Actual + # @@ -1,4 +1,4 @@ + # (map[string]interface {}) (len=2) { + # - (string) (len=5) "error": (string) (len=16) "plugin not found", + # - (string) (len=7) "message": (string) (len=16) "Plugin not found" + # + (string) (len=5) "error": (string) (len=171) "Failed to send request: Get \"https://grafana.com/api/plugins/repo/test\": dial tcp: lookup grafana.com on [::1]:53: read udp [::1]:48019->[::1]:53: read: connection refused", + # + (string) (len=7) "message": (string) (len=24) "Failed to install plugin" + # } + sed -i -e '/func TestPluginInstallAccess/a t.Skip();' pkg/tests/api/plugins/api_install_test.go - substituteInPlace pkg/cmd/grafana-server/main.go \ - --replace 'var version = "5.0.0"' 'var version = "${version}"' + # Skip a flaky test (https://github.com/NixOS/nixpkgs/pull/126928#issuecomment-861424128) + sed -i -e '/it should change folder successfully and return correct result/{N;s/$/\nt.Skip();/}'\ + pkg/services/libraryelements/libraryelements_patch_test.go + + + # main module (github.com/grafana/grafana) does not contain package github.com/grafana/grafana/scripts/go + rm -r scripts/go ''; - # main module (github.com/grafana/grafana) does not contain package github.com/grafana/grafana/scripts/go - # main module (github.com/grafana/grafana) does not contain package github.com/grafana/grafana/dashboard-schemas - preBuild = '' - rm -r dashboard-schemas scripts/go + buildFlagsArray = '' + -ldflags=-s -w -X main.version=${version} ''; postInstall = '' @@ -48,7 +57,7 @@ buildGoModule rec { meta = with lib; { description = "Gorgeous metric viz, dashboards & editors for Graphite, InfluxDB & OpenTSDB"; - license = licenses.asl20; + license = licenses.agpl3; homepage = "https://grafana.com"; maintainers = with maintainers; [ offline fpletz willibutz globin ma27 Frostman ]; platforms = platforms.linux; diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-clock-panel/default.nix b/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-clock-panel/default.nix index c0648c97e6..365c188541 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-clock-panel/default.nix +++ b/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-clock-panel/default.nix @@ -2,11 +2,11 @@ grafanaPlugin rec { pname = "grafana-clock-panel"; - version = "1.1.1"; - zipHash = "sha256-SvZyg7r+XG6i7jqYwxpPn6ZzJc7qmtfPtyphYppURDk="; + version = "1.1.3"; + zipHash = "sha256-80JaMhY/EduSWvFrScfua99DGhT/FJUqY/kl0CafKCs="; meta = with lib; { description = "Clock panel for Grafana"; - license = licenses.asl20; + license = licenses.mit; maintainers = with maintainers; [ lukegb ]; platforms = platforms.unix; }; diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-piechart-panel/default.nix b/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-piechart-panel/default.nix index 2c44d3a4a0..3787c6cc5e 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-piechart-panel/default.nix +++ b/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-piechart-panel/default.nix @@ -2,11 +2,11 @@ grafanaPlugin rec { pname = "grafana-piechart-panel"; - version = "1.6.1"; - zipHash = "sha256-64K/efoBKuBFp8Jw79hTdMyTurTZsL0qfgPDcUWz2jg="; + version = "1.6.2"; + zipHash = "sha256-xKyVT092Ffgzl0BewQw5iZ14I/q6CviUR5t9BVM0bf0="; meta = with lib; { description = "Pie chart panel for Grafana"; - license = licenses.asl20; + license = licenses.mit; maintainers = with maintainers; [ lukegb ]; platforms = platforms.unix; }; diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-worldmap-panel/default.nix b/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-worldmap-panel/default.nix index 2f1671750f..4060a1c8dd 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-worldmap-panel/default.nix +++ b/third_party/nixpkgs/pkgs/servers/monitoring/grafana/plugins/grafana-worldmap-panel/default.nix @@ -2,11 +2,11 @@ grafanaPlugin rec { pname = "grafana-worldmap-panel"; - version = "0.3.2"; - zipHash = "sha256-MGAJzS9X91x6wt305jH1chLoW3zd7pIYDwRnPg9qrgE="; + version = "0.3.3"; + zipHash = "sha256-3n1p3SvcBQMmnbnHimLBP7hauVV1IS3SMwttUWTNvb8="; meta = with lib; { description = "World Map panel for Grafana"; - license = licenses.asl20; + license = licenses.mit; maintainers = with maintainers; [ lukegb ]; platforms = platforms.unix; }; diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/plugins/default.nix b/third_party/nixpkgs/pkgs/servers/monitoring/plugins/default.nix index 15da6bc3f1..c782378908 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/plugins/default.nix +++ b/third_party/nixpkgs/pkgs/servers/monitoring/plugins/default.nix @@ -1,86 +1,120 @@ -{ lib, stdenv, fetchFromGitHub, fetchpatch, autoreconfHook, runCommand -, coreutils, gnugrep, gnused, lm_sensors, net-snmp, openssh, openssl, perl -, dnsutils, libdbi, libmysqlclient, zlib, openldap, procps -, runtimeShell }: - -with lib; +{ lib +, stdenv +, fetchFromGitHub +, writeShellScript +, autoreconfHook +, pkg-config +, runCommand +, coreutils +, gnugrep +, gnused +, lm_sensors +, net-snmp +, openssh +, openssl +, perl +, dnsutils +, libdbi +, libmysqlclient +, uriparser +, zlib +, openldap +, procps +, runtimeShell +}: let - majorVersion = "2.2"; - minorVersion = ".0"; - - binPath = makeBinPath [ coreutils gnugrep gnused lm_sensors net-snmp procps ]; - -in stdenv.mkDerivation { - name = "monitoring-plugins-${majorVersion}${minorVersion}"; - - src = fetchFromGitHub { - owner = "monitoring-plugins"; - repo = "monitoring-plugins"; - rev = "v${majorVersion}"; - sha256 = "1pw7i6d2cnb5nxi2lbkwps2qzz04j9zd86fzpv9ka896b4aqrwv1"; - }; - - patches = [ - # https://github.com/monitoring-plugins/monitoring-plugins/issues/1508 - (fetchpatch { - url = "https://github.com/monitoring-plugins/monitoring-plugins/commit/ac0437ff896ba9ce2549b2d2ec3de146a886f08a.patch"; - sha256 = "0jf6fqkyzag66rid92m7asnr2dp8rr8kn4zjvhqg0mqvf8imppky"; - }) + binPath = lib.makeBinPath [ + (placeholder "out") + "/run/wrappers" + coreutils + gnugrep + gnused + lm_sensors + net-snmp + procps ]; - # !!! Awful hack. Grrr... this of course only works on NixOS. + mailq = runCommand "mailq-wrapper" { preferLocalBuild = true; } '' + mkdir -p $out/bin + ln -s /run/wrappers/bin/sendmail $out/bin/mailq + ''; + + # For unknown reasons the installer tries executing $out/share and fails so + # we create it and remove it again later. + share = writeShellScript "share" '' + exit 0 + ''; + +in +stdenv.mkDerivation rec { + pname = "monitoring-plugins"; + version = "2.3.0"; + + src = fetchFromGitHub { + owner = "monitoring-plugins"; + repo = "monitoring-plugins"; + rev = "v" + lib.versions.majorMinor version; + sha256 = "sha256-yLhHOSrPFRjW701aOL8LPe4OnuJxL6f+dTxNqm0evIg="; + }; + + # TODO: Awful hack. Grrr... this of course only works on NixOS. # Anyway the check that configure performs to figure out the ping # syntax is totally impure, because it runs an actual ping to # localhost (which won't work for ping6 if IPv6 support isn't # configured on the build machine). - preConfigure= '' + # + # --with-ping-command needs to be done here instead of in + # configureFlags due to the spaces in the argument + postPatch = '' substituteInPlace po/Makefile.in.in \ - --replace /bin/sh ${stdenv.shell} + --replace /bin/sh ${runtimeShell} sed -i configure.ac \ - -e 's|^DEFAULT_PATH=.*|DEFAULT_PATH=\"\$out/bin:/run/wrappers/bin:${binPath}\"|' + -e 's|^DEFAULT_PATH=.*|DEFAULT_PATH=\"${binPath}\"|' - configureFlagsArray=( + configureFlagsArray+=( --with-ping-command='/run/wrappers/bin/ping -4 -n -U -w %d -c %d %s' --with-ping6-command='/run/wrappers/bin/ping -6 -n -U -w %d -c %d %s' - --with-sudo-command='/run/wrappers/bin/sudo' - --with-mailq-command='${runCommand "mailq-wrapper" {preferLocalBuild=true;} '' - mkdir -p $out/bin - ln -s /run/wrappers/bin/sendmail $out/bin/mailq - ''}/bin/mailq' ) + + install -Dm555 ${share} $out/share ''; - # !!! make openssh a runtime dependency only - buildInputs = [ dnsutils libdbi libmysqlclient net-snmp openldap openssh openssl perl procps zlib ]; + configureFlags = [ + "--libexecdir=${placeholder "out"}/bin" + "--with-mailq-command=${mailq}/bin/mailq" + "--with-sudo-command=/run/wrappers/bin/sudo" + ]; - nativeBuildInputs = [ autoreconfHook ]; + buildInputs = [ + dnsutils + libdbi + libmysqlclient + net-snmp + openldap + # TODO: make openssh a runtime dependency only + openssh + openssl + perl + procps + uriparser + zlib + ]; + + nativeBuildInputs = [ autoreconfHook pkg-config ]; enableParallelBuilding = true; - # For unknown reasons the installer tries executing $out/share and fails if - # it doesn't succeed. - # So we create it and remove it again later. - preBuild = '' - mkdir -p $out - cat <<_EOF > $out/share -#!${runtimeShell} -exit 0 -_EOF - chmod 755 $out/share - ''; - postInstall = '' rm $out/share - ln -s libexec $out/bin ''; - meta = { + meta = with lib; { description = "Official monitoring plugins for Nagios/Icinga/Sensu and others"; - homepage = "https://www.monitoring-plugins.org"; - license = licenses.gpl2; - platforms = platforms.linux; + homepage = "https://www.monitoring-plugins.org"; + license = licenses.gpl3Only; maintainers = with maintainers; [ thoughtpolice relrod ]; + platforms = platforms.linux; }; } diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/prometheus/node-exporter.nix b/third_party/nixpkgs/pkgs/servers/monitoring/prometheus/node-exporter.nix index ea351db83f..f97485f947 100644 --- a/third_party/nixpkgs/pkgs/servers/monitoring/prometheus/node-exporter.nix +++ b/third_party/nixpkgs/pkgs/servers/monitoring/prometheus/node-exporter.nix @@ -23,8 +23,12 @@ buildGoModule rec { goPackagePath = "github.com/prometheus/node_exporter"; in '' -ldflags= - -X ${goPackagePath}/vendor/github.com/prometheus/common/version.Version=${version} - -X ${goPackagePath}/vendor/github.com/prometheus/common/version.Revision=${rev} + -s -w + -X github.com/prometheus/common/version.Version=${version} + -X github.com/prometheus/common/version.Revision=${rev} + -X github.com/prometheus/common/version.Branch=unknown + -X github.com/prometheus/common/version.BuildUser=nix@nixpkgs + -X github.com/prometheus/common/version.BuildDate=unknown ''; passthru.tests = { inherit (nixosTests.prometheus-exporters) node; }; diff --git a/third_party/nixpkgs/pkgs/servers/monitoring/prometheus/script-exporter.nix b/third_party/nixpkgs/pkgs/servers/monitoring/prometheus/script-exporter.nix new file mode 100644 index 0000000000..d0806b6c5f --- /dev/null +++ b/third_party/nixpkgs/pkgs/servers/monitoring/prometheus/script-exporter.nix @@ -0,0 +1,25 @@ +{ lib, buildGoModule, fetchFromGitHub, nixosTests }: + +buildGoModule rec { + pname = "script_exporter"; + version = "1.2.0"; + + src = fetchFromGitHub { + owner = "adhocteam"; + repo = pname; + rev = "v${version}"; + sha256 = "t/xgRalcHxEcT1peU1ePJUItD02rQdfz1uWpXDBo6C0="; + }; + + vendorSha256 = "Hs1SNpC+t1OCcoF3FBgpVGkhR97ulq6zYhi8BQlgfVc="; + + passthru.tests = { inherit (nixosTests.prometheus-exporters) script; }; + + meta = with lib; { + description = "Shell script prometheus exporter"; + homepage = "https://github.com/adhocteam/script_exporter"; + license = licenses.mit; + maintainers = with maintainers; [ Flakebi ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/servers/mpd/default.nix b/third_party/nixpkgs/pkgs/servers/mpd/default.nix index 3e1f810000..eef79853b3 100644 --- a/third_party/nixpkgs/pkgs/servers/mpd/default.nix +++ b/third_party/nixpkgs/pkgs/servers/mpd/default.nix @@ -1,4 +1,6 @@ -{ lib, stdenv, fetchFromGitHub, meson, ninja, pkg-config, glib, systemd, boost, darwin +{ lib, stdenv, fetchFromGitHub, meson, ninja, pkg-config, glib, systemd, boost +# Darwin inputs +, AudioToolbox, AudioUnit # Inputs , curl, libmms, libnfs, liburing, samba # Archive support @@ -9,7 +11,7 @@ # Filters , libsamplerate # Outputs -, alsaLib, libjack2, libpulseaudio, libshout +, alsa-lib, libjack2, libpulseaudio, libshout # Misc , icu, sqlite, avahi, dbus, pcre, libgcrypt, expat # Services @@ -61,7 +63,7 @@ let # Filter plugins libsamplerate = [ libsamplerate ]; # Output plugins - alsa = [ alsaLib ]; + alsa = [ alsa-lib ]; jack = [ libjack2 ]; pulse = [ libpulseaudio ]; shout = [ libshout ]; @@ -114,13 +116,13 @@ let in stdenv.mkDerivation rec { pname = "mpd"; - version = "0.22.6"; + version = "0.22.9"; src = fetchFromGitHub { owner = "MusicPlayerDaemon"; repo = "MPD"; rev = "v${version}"; - sha256 = "sha256-Xu+MxMxR5u++R3lZHe6UQ+mEmRnWbN6173ZX39KS1A8="; + sha256 = "sha256-Qw7qJqxcBKxshT/qbVUegE1Tpt4QV5WbUHT2+qLbr9o="; }; buildInputs = [ @@ -133,7 +135,7 @@ let gtest ] ++ concatAttrVals features_ featureDependencies - ++ lib.optionals stdenv.isDarwin [ darwin.apple_sdk.frameworks.AudioToolbox darwin.apple_sdk.frameworks.AudioUnit ]; + ++ lib.optionals stdenv.isDarwin [ AudioToolbox AudioUnit ]; nativeBuildInputs = [ meson diff --git a/third_party/nixpkgs/pkgs/servers/mumsi/default.nix b/third_party/nixpkgs/pkgs/servers/mumsi/default.nix index b4d1fda409..c6fd2332c9 100644 --- a/third_party/nixpkgs/pkgs/servers/mumsi/default.nix +++ b/third_party/nixpkgs/pkgs/servers/mumsi/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchFromGitHub, cmake, pkg-config, boost -, log4cpp, pjsip, openssl, alsaLib, mumlib }: +, log4cpp, pjsip, openssl, alsa-lib, mumlib }: with lib; stdenv.mkDerivation { pname = "mumsi"; version = "unstable-2018-12-12"; @@ -11,7 +11,7 @@ with lib; stdenv.mkDerivation { sha256 = "0vrivl1fiiwjsz4v26nrn8ra3k9v0mcz7zjm2z319fw8hv6n1nrk"; }; - buildInputs = [ boost log4cpp pkg-config pjsip mumlib openssl alsaLib ]; + buildInputs = [ boost log4cpp pkg-config pjsip mumlib openssl alsa-lib ]; nativeBuildInputs = [ cmake pkg-config ]; installPhase = '' install -Dm555 mumsi $out/bin/mumsi diff --git a/third_party/nixpkgs/pkgs/servers/nzbhydra2/default.nix b/third_party/nixpkgs/pkgs/servers/nzbhydra2/default.nix index 12d2c0b707..375224dfdc 100644 --- a/third_party/nixpkgs/pkgs/servers/nzbhydra2/default.nix +++ b/third_party/nixpkgs/pkgs/servers/nzbhydra2/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "nzbhydra2"; - version = "3.14.1"; + version = "3.14.2"; src = fetchzip { url = "https://github.com/theotherp/${pname}/releases/download/v${version}/${pname}-${version}-linux.zip"; - sha512 = "2mfrqqwrfjvr48vm4r0spda3vlg1h511r6hrlv7k9233ps97bjjir6hms82lgqnlirsixayxs47cldjy8amdn3vc6kxsifmbd6a924p"; + sha512 = "sha512-wC2GhCjkRt/rmLAhe6nDCdF4PsfBpOo0T4BOSdw4wlBr7eCfo4Cibt9VvK6DNLuDk7EGkUfxvw9HI9sbRJlpCw=="; stripRoot = false; }; diff --git a/third_party/nixpkgs/pkgs/servers/ombi/default.nix b/third_party/nixpkgs/pkgs/servers/ombi/default.nix index a2ffc449d4..e5e37321d5 100644 --- a/third_party/nixpkgs/pkgs/servers/ombi/default.nix +++ b/third_party/nixpkgs/pkgs/servers/ombi/default.nix @@ -10,14 +10,14 @@ let "Unsupported system: ${stdenv.hostPlatform.system}"); hash = { - x64-linux_hash = "sha256-9m5vWobkibqOHsuIJmvEHuwsuJogvQQe8h0dvFj62tw="; - arm64-linux_hash = "sha256-OBm4j5Ez04XLjp4DHyOrwSOSGanuuI8g2y2wZaotH8M="; - x64-osx_hash = "sha256-UPf6Yl0nbhmiWq9oGyi7sRhlahB6zHL7nTj7GRlKoII="; + x64-linux_hash = "sha256-LRScuJVI3/657RYZjY9I3rcmANaEaw48CWIYc0VWHs4="; + arm64-linux_hash = "sha256-k0wi8FlVnU60Cnsng6CNNfoP+UItFLj15OxsqAfkO+4="; + x64-osx_hash = "sha256-czcPj+PC4cfJMqYYZyVy1ReO8pqYFUqeV8o/moHuCRw="; }."${arch}-${os}_hash"; in stdenv.mkDerivation rec { pname = "ombi"; - version = "4.0.1345"; + version = "4.0.1430"; sourceRoot = "."; diff --git a/third_party/nixpkgs/pkgs/servers/ombi/update.sh b/third_party/nixpkgs/pkgs/servers/ombi/update.sh index fb2549bb74..1503edde99 100755 --- a/third_party/nixpkgs/pkgs/servers/ombi/update.sh +++ b/third_party/nixpkgs/pkgs/servers/ombi/update.sh @@ -27,7 +27,7 @@ updateVersion() currentVersion=$(cd $dirname && nix eval --raw '(with import ../../.. {}; ombi.version)') -latestTag=$(curl https://api.github.com/repos/Ombi-App/Ombi/tags | jq -r '.[] | .name' | sort --version-sort | tail -1) +latestTag=$(curl https://api.github.com/repos/Ombi-App/Ombi/releases/latest | jq -r ".tag_name") latestVersion="$(expr $latestTag : 'v\(.*\)')" if [[ "$currentVersion" == "$latestVersion" ]]; then diff --git a/third_party/nixpkgs/pkgs/servers/openafs/1.9/srcs.nix b/third_party/nixpkgs/pkgs/servers/openafs/1.9/srcs.nix index 8c5f63cac1..853cd2aaba 100644 --- a/third_party/nixpkgs/pkgs/servers/openafs/1.9/srcs.nix +++ b/third_party/nixpkgs/pkgs/servers/openafs/1.9/srcs.nix @@ -1,14 +1,14 @@ { fetchurl }: rec { - version = "1.9.0"; + version = "1.9.1"; src = fetchurl { url = "https://www.openafs.org/dl/openafs/${version}/openafs-${version}-src.tar.bz2"; - sha256 = "1jw99zwisq25l0smdm8f0gfwhynk532s2ch44blrvxyd7all8kcd"; + sha256 = "sha256-7rHihVR4VobHAzt0ZALFOLJnlfd1Qwsa5ohpRFWBPbw="; }; srcs = [ src (fetchurl { url = "https://www.openafs.org/dl/openafs/${version}/openafs-${version}-doc.tar.bz2"; - sha256 = "03x1pv8l4bv2fdns1l4sfy200nggy0a4b1f7qd0mnggdaj12c4jp"; + sha256 = "sha256-pvF8CdTl+5DNuymNvhb3UrGW05LcXRv8cZp2QQlXF+E="; })]; } diff --git a/third_party/nixpkgs/pkgs/servers/pinnwand/default.nix b/third_party/nixpkgs/pkgs/servers/pinnwand/default.nix index 44dc87d198..3962ce9711 100644 --- a/third_party/nixpkgs/pkgs/servers/pinnwand/default.nix +++ b/third_party/nixpkgs/pkgs/servers/pinnwand/default.nix @@ -17,6 +17,13 @@ with python3.pkgs; buildPythonApplication rec { sha256 = "046xk2y59wa0pdp7s3hp1gh8sqdw0yl4xab22r2x44iwwcyb0gy5"; }; + postPatch = '' + substituteInPlace pyproject.toml \ + --replace 'click = "^7.0"' 'click = "*"' \ + --replace 'docutils = "^0.16"' 'docutils = "*"' \ + --replace 'sqlalchemy = "^1.3"' 'sqlalchemy = "*"' + ''; + nativeBuildInputs = [ poetry-core ]; @@ -34,6 +41,11 @@ with python3.pkgs; buildPythonApplication rec { checkInputs = [ pytestCheckHook ]; + disabledTests = [ + # pygments renamed rst to restructuredText, hence a mismatch on this test + "test_guess_language" + ]; + __darwinAllowLocalNetworking = true; passthru.tests = nixosTests.pinnwand; diff --git a/third_party/nixpkgs/pkgs/servers/pinnwand/steck.nix b/third_party/nixpkgs/pkgs/servers/pinnwand/steck.nix index 8d44f8160d..52efdc148a 100644 --- a/third_party/nixpkgs/pkgs/servers/pinnwand/steck.nix +++ b/third_party/nixpkgs/pkgs/servers/pinnwand/steck.nix @@ -1,4 +1,8 @@ -{ lib, pkgs, python3Packages, nixosTests }: +{ lib +, pkgs +, python3Packages +, nixosTests +}: python3Packages.buildPythonApplication rec { pname = "steck"; @@ -9,6 +13,11 @@ python3Packages.buildPythonApplication rec { sha256 = "1a3l427ibwck9zzzy1sp10hmjgminya08i4r9j4559qzy7lxghs1"; }; + postPatch = '' + substituteInPlace setup.py \ + --replace 'click>=7.0,<8.0' 'click' + ''; + propagatedBuildInputs = with python3Packages; [ pkgs.git appdirs diff --git a/third_party/nixpkgs/pkgs/servers/pleroma-otp/default.nix b/third_party/nixpkgs/pkgs/servers/pleroma-otp/default.nix deleted file mode 100644 index 10fd262774..0000000000 --- a/third_party/nixpkgs/pkgs/servers/pleroma-otp/default.nix +++ /dev/null @@ -1,71 +0,0 @@ -{ lib -, stdenv -, autoPatchelfHook -, fetchurl -, file -, makeWrapper -, ncurses -, nixosTests -, openssl -, unzip -, zlib -}: -stdenv.mkDerivation { - pname = "pleroma-otp"; - version = "2.3.0"; - - # To find the latest binary release stable link, have a look at - # the CI pipeline for the latest commit of the stable branch - # https://git.pleroma.social/pleroma/pleroma/-/tree/stable - src = { - aarch64-linux = fetchurl { - url = "https://git.pleroma.social/pleroma/pleroma/-/jobs/182392/artifacts/download"; - sha256 = "1drpd6xh7m2damxi5impb8jwvjl6m3qv5yxynl12i8g66vi3rbwf"; - }; - x86_64-linux = fetchurl { - url = "https://git.pleroma.social/pleroma/pleroma/-/jobs/182388/artifacts/download"; - sha256 = "0glr0iiqmylwwsn5r946yqr9kx97j2zznrc0imyxm3j0vhz8xzl4"; - }; - }."${stdenv.hostPlatform.system}"; - - nativeBuildInputs = [ unzip ]; - - buildInputs = [ - autoPatchelfHook - file - makeWrapper - ncurses - openssl - zlib - ]; - - # mkDerivation fails to detect the zip nature of $src due to the - # missing .zip extension. - # Let's unpack the archive explicitely. - unpackCmd = "unzip $curSrc"; - - installPhase = '' - mkdir $out - cp -r * $out''; - - # Pleroma is using the project's root path (here the store path) - # as its TMPDIR. - # Patching it to move the tmp dir to the actual tmpdir - postFixup = '' - wrapProgram $out/bin/pleroma \ - --set-default RELEASE_TMP "/tmp" - wrapProgram $out/bin/pleroma_ctl \ - --set-default RELEASE_TMP "/tmp"''; - - passthru.tests = { - pleroma = nixosTests.pleroma; - }; - - meta = with lib; { - description = "ActivityPub microblogging server"; - homepage = https://git.pleroma.social/pleroma/pleroma; - license = licenses.agpl3; - maintainers = with maintainers; [ ninjatrappeur ]; - platforms = [ "x86_64-linux" "aarch64-linux" ]; - }; -} diff --git a/third_party/nixpkgs/pkgs/servers/pleroma/default.nix b/third_party/nixpkgs/pkgs/servers/pleroma/default.nix new file mode 100644 index 0000000000..01608f1ca4 --- /dev/null +++ b/third_party/nixpkgs/pkgs/servers/pleroma/default.nix @@ -0,0 +1,224 @@ +{ lib, beamPackages +, fetchFromGitHub, fetchFromGitLab +, file, cmake +, nixosTests, writeText +, ... +}: + +beamPackages.mixRelease rec { + pname = "pleroma"; + version = "2.3.50"; + + src = fetchFromGitLab { + domain = "git.pleroma.social"; + owner = "pleroma"; + repo = "pleroma"; + rev = "94687e23938b808a3fff95c92956ec337160cd0b"; + sha256 = "160ss6qhx3007lyb0f5cjzbm5dzxq9q8rfn83l8qfxgan8hliag6"; + }; + + mixNixDeps = import ./mix.nix { + inherit beamPackages lib; + overrides = (final: prev: { + # mix2nix does not support git dependencies yet, + # so we need to add them manually + prometheus_ex = beamPackages.buildMix rec { + name = "prometheus_ex"; + version = "3.0.5"; + + src = fetchFromGitLab { + domain = "git.pleroma.social"; + group = "pleroma"; + owner = "elixir-libraries"; + repo = "prometheus.ex"; + rev = "a4e9beb3c1c479d14b352fd9d6dd7b1f6d7deee5"; + sha256 = "1v0q4bi7sb253i8q016l7gwlv5562wk5zy3l2sa446csvsacnpjk"; + }; + beamDeps = with final; [ prometheus ]; + }; + eblurhash = beamPackages.buildRebar3 rec { + name = "eblurhash"; + version = "0.0.0"; + + src = fetchFromGitHub { + owner = "zotonic"; + repo = "eblurhash"; + rev = "04a0b76eadf4de1be17726f39b6313b88708fd12"; + sha256 = "1b9r41scg9rn3skx65ssv1q5lczmg0ky6h1y39qajsvdi5w3swyx"; + }; + beamDeps = with final; [ ]; + }; + captcha = beamPackages.buildMix rec { + name = "captcha"; + version = "0.1.0"; + + src = fetchFromGitLab { + domain = "git.pleroma.social"; + group = "pleroma"; + owner = "elixir-libraries"; + repo = "elixir-captcha"; + rev = "e0f16822d578866e186a0974d65ad58cddc1e2ab"; + sha256 = "0qbf86l59kmpf1nd82v4141ba9ba75xwmnqzpgbm23fa1hh8pi9c"; + }; + beamDeps = with final; [ ]; + }; + remote_ip = beamPackages.buildMix rec { + name = "remote_ip"; + version = "0.1.5"; + + src = fetchFromGitLab { + domain = "git.pleroma.social"; + group = "pleroma"; + owner = "elixir-libraries"; + repo = "remote_ip"; + rev = "b647d0deecaa3acb140854fe4bda5b7e1dc6d1c8"; + sha256 = "0c7vmakcxlcs3j040018i7bfd6z0yq6fjfig02g5fgakx398s0x6"; + }; + beamDeps = with final; [ combine plug inet_cidr ]; + }; + concurrent_limiter = beamPackages.buildMix rec { + name = "concurrent_limiter"; + version = "0.1.0"; + + src = fetchFromGitLab { + domain = "git.pleroma.social"; + group = "pleroma"; + owner = "elixir-libraries"; + repo = "concurrent_limiter"; + rev = "d81be41024569330f296fc472e24198d7499ba78"; + sha256 = "1nci8zz1gy7dnvxf5ydjqbagf4g9f7z5x1v9kdyy7jz9f37z6qw9"; + }; + beamDeps = with final; [ telemetry ]; + }; + prometheus_phx = beamPackages.buildMix rec { + name = "prometheus_phx"; + version = "0.1.1"; + + preBuild = '' + touch config/prod.exs + ''; + src = fetchFromGitLab { + domain = "git.pleroma.social"; + group = "pleroma"; + owner = "elixir-libraries"; + repo = "prometheus-phx"; + rev = "9cd8f248c9381ffedc799905050abce194a97514"; + sha256 = "0211z4bxb0bc0zcrhnph9kbbvvi1f2v95madpr96pqzr60y21cam"; + }; + beamDeps = with final; [ prometheus_ex ]; + }; + majic = beamPackages.buildMix rec { + name = "majic"; + version = "1.0.0"; + + src = fetchFromGitLab { + domain = "git.pleroma.social"; + group = "pleroma"; + owner = "elixir-libraries"; + repo = "majic"; + rev = "289cda1b6d0d70ccb2ba508a2b0bd24638db2880"; + sha256 = "15605lsdd74bmsp5z96f76ihn7m2g3p1hjbhs2x7v7309n1k108n"; + }; + patchPhase = '' + substituteInPlace lib/majic/server.ex --replace "erlang.now" "erlang.time" + ''; + buildInputs = [ file ]; + + beamDeps = with final; [ nimble_pool mime plug elixir_make ]; + }; + crypt = beamPackages.buildRebar3 rec { + name = "crypt"; + version = "0.4.3"; + + src = fetchFromGitLab { + domain = "git.pleroma.social"; + group = "pleroma"; + owner = "elixir-libraries"; + repo = "crypt"; + rev = "cf2aa3f11632e8b0634810a15b3e612c7526f6a3"; + sha256 = "0fnzljxy9pwabh1nzx0vawn131d5pdfb0p98kvpkqs441jr0ii73"; + }; + + postInstall = "mv $out/lib/erlang/lib/crypt-${version}/priv/{source,crypt}.so"; + + beamDeps = with final; [ elixir_make ]; + }; + web_push_encryption = beamPackages.buildMix rec { + name = "web_push_encryption"; + version = "0.3.0"; + src = fetchFromGitHub { + owner = "lanodan"; + repo = "elixir-web-push-encryption"; + rev = "026a043037a89db4da8f07560bc8f9c68bcf0cc0"; + sha256 = "0a4x6njqp8v579bc965c9ipsr1z3klrc0pvgj8x1xf69r77gs6sj"; + }; + beamDeps = with final; [ httpoison jose ]; + }; + + # Some additional build inputs and build fixes + http_signatures = prev.http_signatures.override { + patchPhase = '' + substituteInPlace mix.exs --replace ":logger" ":logger, :public_key" + ''; + }; + fast_html = prev.fast_html.override { + nativeBuildInputs = [ cmake ]; + dontUseCmakeConfigure = true; + }; + syslog = prev.syslog.override { + buildPlugins = with beamPackages; [ pc ]; + }; + + # This needs a different version (1.0.14 -> 1.0.18) to build properly with + # our Erlang/OTP version. + eimp = beamPackages.buildRebar3 rec { + name = "eimp"; + version = "1.0.18"; + + src = beamPackages.fetchHex { + pkg = name; + inherit version; + sha256 = "0fnx2pm1n2m0zs2skivv43s42hrgpq9i143p9mngw9f3swjqpxvx"; + }; + + patchPhase = '' + echo '{plugins, [pc]}.' >> rebar.config + ''; + buildPlugins = with beamPackages; [ pc ]; + + beamDeps = with final; [ p1_utils ]; + }; + + mime = prev.mime.override { + patchPhase = let + cfgFile = writeText "config.exs" '' + use Mix.Config + config :mime, :types, %{ + "application/activity+json" => ["activity+json"], + "application/jrd+json" => ["jrd+json"], + "application/ld+json" => ["activity+json"], + "application/xml" => ["xml"], + "application/xrd+xml" => ["xrd+xml"] + } + ''; + in '' + mkdir config + cp ${cfgFile} config/config.exs + ''; + }; + }); + }; + + passthru = { + tests.pleroma = nixosTests.pleroma; + inherit mixNixDeps; + }; + + meta = with lib; { + description = "ActivityPub microblogging server"; + homepage = https://git.pleroma.social/pleroma/pleroma; + license = licenses.agpl3; + maintainers = with maintainers; [ petabyteboy ninjatrappeur yuka ]; + platforms = [ "x86_64-linux" "aarch64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/servers/pleroma/mix.nix b/third_party/nixpkgs/pkgs/servers/pleroma/mix.nix new file mode 100644 index 0000000000..d32e20b312 --- /dev/null +++ b/third_party/nixpkgs/pkgs/servers/pleroma/mix.nix @@ -0,0 +1,1520 @@ +{ lib, beamPackages, overrides ? (x: y: {}) }: + +let + buildRebar3 = lib.makeOverridable beamPackages.buildRebar3; + buildMix = lib.makeOverridable beamPackages.buildMix; + buildErlangMk = lib.makeOverridable beamPackages.buildErlangMk; + + self = packages // (overrides self packages); + + packages = with beamPackages; with self; { + accept = buildRebar3 rec { + name = "accept"; + version = "0.3.5"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1f0vmjjyyz8klhdb3k8zrcxpidhfy6706327nmisnbnc1ci8rc8i"; + }; + + beamDeps = []; + }; + + base62 = buildMix rec { + name = "base62"; + version = "1.2.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1fvpygkdmd7l737lv7svir8n1vhk0m094i8ygwcvx9gam2ykc4yl"; + }; + + beamDeps = [ custom_base ]; + }; + + base64url = buildRebar3 rec { + name = "base64url"; + version = "0.0.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1yf1m1587vd9l6w4x5b36g4kxrxqfpwbqk2l4mkqinzmwch9pc7s"; + }; + + beamDeps = []; + }; + + bbcode_pleroma = buildMix rec { + name = "bbcode_pleroma"; + version = "0.2.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1hyixcxhcf2j2gyavmmnvfslnl6z60dz1qa9xysfspws85s1118r"; + }; + + beamDeps = [ nimble_parsec ]; + }; + + bcrypt_elixir = buildMix rec { + name = "bcrypt_elixir"; + version = "2.3.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0s9psinz913l690xbcrl21m23zwinw4r2ypjgg7ybl3f9wfxd09c"; + }; + + beamDeps = [ comeonin elixir_make ]; + }; + + benchee = buildMix rec { + name = "benchee"; + version = "1.0.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1nxd6blgmalb1qm9n11yaq24din2grc3pnnfsx6wkiz9hzkqmm9s"; + }; + + beamDeps = [ deep_merge ]; + }; + + bunt = buildMix rec { + name = "bunt"; + version = "0.2.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0lw3v9kwbbcy1v6ygziiky887gffwwmxvyg4r1v0zm71kzhcgxbs"; + }; + + beamDeps = []; + }; + + cachex = buildMix rec { + name = "cachex"; + version = "3.3.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "189irin4xkbnj6b3ih1h5fvli1xq6m1sz1xiyqryyk71vphmw3nr"; + }; + + beamDeps = [ eternal jumper sleeplocks unsafe ]; + }; + + calendar = buildMix rec { + name = "calendar"; + version = "1.0.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0vqa1zpzsdgr6i3yx8j9b6qscvgrbvzn43p5bqm930hcja0ra3lr"; + }; + + beamDeps = [ tzdata ]; + }; + + castore = buildMix rec { + name = "castore"; + version = "0.1.10"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0r96zwva2g6q59vyar8swaka0vxx27xfpf17xar2ss25rgh190x4"; + }; + + beamDeps = []; + }; + + certifi = buildRebar3 rec { + name = "certifi"; + version = "2.6.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0zmvagzisnk7lj5pfipl19mjq9wn70i339hpbkfljf0vk6s9fk2j"; + }; + + beamDeps = []; + }; + + combine = buildMix rec { + name = "combine"; + version = "0.10.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "06s5y8b0snr1s5ax9v3s7rc6c8xf5vj6878d1mc7cc07j0bvq78v"; + }; + + beamDeps = []; + }; + + comeonin = buildMix rec { + name = "comeonin"; + version = "5.3.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "012zr4s7b5bipng6yszqxkqr1lcv7imf8gyvxad56jachh1396fh"; + }; + + beamDeps = []; + }; + + connection = buildMix rec { + name = "connection"; + version = "1.1.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1746n8ba11amp1xhwzp38yfii2h051za8ndxlwdykyqqljq1wb3j"; + }; + + beamDeps = []; + }; + + cors_plug = buildMix rec { + name = "cors_plug"; + version = "2.0.3"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1sls8rns2k48qrga0ngysbn9aknapmn3xfn28by1gqbcir0y2jpf"; + }; + + beamDeps = [ plug ]; + }; + + cowboy = buildErlangMk rec { + name = "cowboy"; + version = "2.9.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1phv0a1zbgk7imfgcm0dlacm7hbjcdygb0pqmx4s26jf9f9rywic"; + }; + + beamDeps = [ cowlib ranch ]; + }; + + cowboy_telemetry = buildRebar3 rec { + name = "cowboy_telemetry"; + version = "0.3.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1bzhcdq12p837cii2jgvzjyrffiwgm5bsb1pra2an3hkcqrzsvis"; + }; + + beamDeps = [ cowboy telemetry ]; + }; + + cowlib = buildRebar3 rec { + name = "cowlib"; + version = "2.11.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1ac6pj3x4vdbsa8hvmbzpdfc4k0v1p102jbd39snai8wnah9sgib"; + }; + + beamDeps = []; + }; + + credo = buildMix rec { + name = "credo"; + version = "1.5.5"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1pj7h9fk3i3rhxs65z8d64nwbnddhqj0dwy9bn2nm5cif2mj71nx"; + }; + + beamDeps = [ bunt file_system jason ]; + }; + + crontab = buildMix rec { + name = "crontab"; + version = "1.1.8"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1gkb7ps38j789acj8dw2q7jnhhw43idyvh36fb3i52yjkhli7ra8"; + }; + + beamDeps = [ ecto ]; + }; + + custom_base = buildMix rec { + name = "custom_base"; + version = "0.2.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0qx47d4w2mxa3rr6mrxdasgk7prxqwd0y9zpjhz61jayrkx1kw4d"; + }; + + beamDeps = []; + }; + + db_connection = buildMix rec { + name = "db_connection"; + version = "2.4.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1j6psw0dxq1175b6zcqpm6vavv4n6sv72ji57l8b6qczmlhnqhdd"; + }; + + beamDeps = [ connection telemetry ]; + }; + + decimal = buildMix rec { + name = "decimal"; + version = "2.0.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0xzm8hfhn8q02rmg8cpgs68n5jz61wvqg7bxww9i1a6yanf6wril"; + }; + + beamDeps = []; + }; + + deep_merge = buildMix rec { + name = "deep_merge"; + version = "1.0.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0c2li2a3hxcc05nwvy4kpsal0315yk900kxyybld972b15gqww6f"; + }; + + beamDeps = []; + }; + + earmark = buildMix rec { + name = "earmark"; + version = "1.4.15"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1vlrk5zmx1v5jnkkmchxwns8yy1kclzkcz0g6xpmiwy9bfw0j4iv"; + }; + + beamDeps = [ earmark_parser ]; + }; + + earmark_parser = buildMix rec { + name = "earmark_parser"; + version = "1.4.13"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1fhlh9bnph5nqdhy7w69xzb7lra1b3v16mk4yb947bx0ydmc40nn"; + }; + + beamDeps = []; + }; + + ecto = buildMix rec { + name = "ecto"; + version = "3.4.6"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "02zpyd5mm2zfkz4b839nz1x3ias5av3by1vjzkfc4x9flviaj4vg"; + }; + + beamDeps = [ decimal jason telemetry ]; + }; + + ecto_enum = buildMix rec { + name = "ecto_enum"; + version = "1.4.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1r2ffrr020fhfviqn21cv06sd3sp4bf1jra0xrgb3hl1f445rdcg"; + }; + + beamDeps = [ ecto ecto_sql postgrex ]; + }; + + ecto_explain = buildMix rec { + name = "ecto_explain"; + version = "0.1.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0c3366grl2r7k29a7sxwgqmq670c98sya4p96k7g9v1hmsc7f3hx"; + }; + + beamDeps = []; + }; + + ecto_sql = buildMix rec { + name = "ecto_sql"; + version = "3.4.5"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1hlar4r206szv84qbxc4igg2grvmqaa4mls110y6mcvr6mm0r69i"; + }; + + beamDeps = [ db_connection ecto postgrex telemetry ]; + }; + + eimp = buildRebar3 rec { + name = "eimp"; + version = "1.0.14"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1dl3xdfd42y389fc3sbssva163jgpy48pni2kqnvjy9027rk64ah"; + }; + + beamDeps = [ p1_utils ]; + }; + + elixir_make = buildMix rec { + name = "elixir_make"; + version = "0.6.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1na8agkks1hrwq1lxfj4yd96bvfcs4hk7mbra9z6lli2vanrxr03"; + }; + + beamDeps = []; + }; + + esshd = buildMix rec { + name = "esshd"; + version = "0.1.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "10cryiv674p2mn9gvncl9j3rzgv0523chz9q6sm91lq960g38gnp"; + }; + + beamDeps = []; + }; + + eternal = buildMix rec { + name = "eternal"; + version = "1.2.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "10p7m6kv2z2c16gw36wgiwnkykss4lfkmm71llxp09ipkhmy77rc"; + }; + + beamDeps = []; + }; + + ex2ms = buildMix rec { + name = "ex2ms"; + version = "1.5.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "13vh9yrs60cifqxzw52n6xxdp174w704vm1ks45k4avrzla763b7"; + }; + + beamDeps = []; + }; + + ex_aws = buildMix rec { + name = "ex_aws"; + version = "2.1.9"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "040dmj94xg3wnk9wplm0myr2q12zad4w1xz1zc0n01y90dkpfv1y"; + }; + + beamDeps = [ hackney jason sweet_xml ]; + }; + + ex_aws_s3 = buildMix rec { + name = "ex_aws_s3"; + version = "2.2.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1g91dd4jfmqp9ds8ji5kqlgcm2bk6ajci3mpi0grxqki6dhmq5qm"; + }; + + beamDeps = [ ex_aws sweet_xml ]; + }; + + ex_const = buildMix rec { + name = "ex_const"; + version = "0.2.4"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0rwppain0bd36krph1as0vxlxb42psc6mlkfi67jp6fc21k39zcn"; + }; + + beamDeps = []; + }; + + ex_doc = buildMix rec { + name = "ex_doc"; + version = "0.24.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1nmpdxydbc1khcayab98gfv7km2qrqmgp1s64kjdkf11x3cy2d71"; + }; + + beamDeps = [ earmark_parser makeup_elixir makeup_erlang ]; + }; + + ex_machina = buildMix rec { + name = "ex_machina"; + version = "2.7.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1y2v4j1zg1ji8q8di0fxpc3z3n2jmbnc85d6hx68j4fykfisg6j1"; + }; + + beamDeps = [ ecto ecto_sql ]; + }; + + ex_syslogger = buildMix rec { + name = "ex_syslogger"; + version = "1.5.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "16c376cvw0bcjz8a6gs3nhmg037i894gl5kgxi8jdinv6r0sp7xb"; + }; + + beamDeps = [ poison syslog ]; + }; + + excoveralls = buildMix rec { + name = "excoveralls"; + version = "0.12.3"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1nnsr9dv7mybcxx3y5p2gqzyy3p479w21c55vvsq6hi6dihkx2jn"; + }; + + beamDeps = [ hackney jason ]; + }; + + fast_html = buildMix rec { + name = "fast_html"; + version = "2.0.4"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1sk1fwib6x5isb3sy8g5i6gw0n6pfqrza12r89gas0pw3ma9vd1v"; + }; + + beamDeps = [ elixir_make nimble_pool ]; + }; + + fast_sanitize = buildMix rec { + name = "fast_sanitize"; + version = "0.2.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0rj4x64rl7pspagp30dhw9yzal4q2c8937am1m5akbshjbdh9wk9"; + }; + + beamDeps = [ fast_html plug ]; + }; + + file_system = buildMix rec { + name = "file_system"; + version = "0.2.10"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1p0myxmnjjds8bbg69dd6fvhk8q3n7lb78zd4qvmjajnzgdmw6a1"; + }; + + beamDeps = []; + }; + + flake_id = buildMix rec { + name = "flake_id"; + version = "0.1.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "09yq3dlqqrb7v4ysblwpz1al0q5qcmryldkwq1kx5b71zn881z1i"; + }; + + beamDeps = [ base62 ecto ]; + }; + + floki = buildMix rec { + name = "floki"; + version = "0.30.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1f3b2wd1pmsgkl8np13pwgp57161p0wxfwnnrjzlq73x8hj3bh79"; + }; + + beamDeps = [ html_entities ]; + }; + + gen_smtp = buildRebar3 rec { + name = "gen_smtp"; + version = "0.15.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "03s40l97j6z4mx6a84cbl9w94v3dvfw4f97dqx4hi61hh2l19g99"; + }; + + beamDeps = []; + }; + + gen_stage = buildMix rec { + name = "gen_stage"; + version = "0.14.3"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0xld8m2l9a7pbzmq7vp0r9mz4pkisrjpslgbjs9ikhwlkllf4lw4"; + }; + + beamDeps = []; + }; + + gen_state_machine = buildMix rec { + name = "gen_state_machine"; + version = "2.0.5"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1j21ih8cm0kkirjd2dh0gcxhngf5h3dvv4gqw6khj9ibww2x9b2w"; + }; + + beamDeps = []; + }; + + gettext = buildMix rec { + name = "gettext"; + version = "0.18.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1igmn69xzj5wpkblg3k9v7wa2fjc2j0cncwx0grk1pag7nqkgxgr"; + }; + + beamDeps = []; + }; + + gun = buildRebar3 rec { + name = "gun"; + version = "2.0.0-rc.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1z2lsbbpl2925z8x2ri0rhp30ccn9d08pgqd2hkxf4342jp1x7bb"; + }; + + beamDeps = [ cowlib ]; + }; + + hackney = buildRebar3 rec { + name = "hackney"; + version = "1.17.4"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "05kbk3rpw2j3cb9pybikydxmi2nm5pidpx0jsm48av2mjr4zy5ny"; + }; + + beamDeps = [ certifi idna metrics mimerl parse_trans ssl_verify_fun unicode_util_compat ]; + }; + + html_entities = buildMix rec { + name = "html_entities"; + version = "0.5.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1k7xyj0q38ms3n5hbn782pa6w1vgd6biwlxr4db6319l828a6fy5"; + }; + + beamDeps = []; + }; + + html_sanitize_ex = buildMix rec { + name = "html_sanitize_ex"; + version = "1.3.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1mhr2jnyzrqv0298m6vghnc9v2iwck11kwfhyh07gmc8v0x3kyxb"; + }; + + beamDeps = [ mochiweb ]; + }; + + http_signatures = buildMix rec { + name = "http_signatures"; + version = "0.1.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "097q5jffswcaav40i8dhlds6hgdhsz53yd3fz8w7vl9z3rrv79zq"; + }; + + beamDeps = []; + }; + + httpoison = buildMix rec { + name = "httpoison"; + version = "1.8.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0fiwkdrbj7mmz449skp7laz2jdwsqn3svddncmicd46gk2m9w218"; + }; + + beamDeps = [ hackney ]; + }; + + idna = buildRebar3 rec { + name = "idna"; + version = "6.1.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1sjcjibl34sprpf1dgdmzfww24xlyy34lpj7mhcys4j4i6vnwdwj"; + }; + + beamDeps = [ unicode_util_compat ]; + }; + + inet_cidr = buildMix rec { + name = "inet_cidr"; + version = "1.0.4"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1g61i08cizr99ivy050lv8fmvnwia9zmipfvlwff8jkhi40x78k4"; + }; + + beamDeps = []; + }; + + jason = buildMix rec { + name = "jason"; + version = "1.2.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0y91s7q8zlfqd037c1mhqdhrvrf60l4ax7lzya1y33h5y3sji8hq"; + }; + + beamDeps = [ decimal ]; + }; + + joken = buildMix rec { + name = "joken"; + version = "2.3.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "07mwnzzb9slhzqjmd0nbs4dyjkbb3v06km82mhvdbi8fkjkn7cjp"; + }; + + beamDeps = [ jose ]; + }; + + jose = buildMix rec { + name = "jose"; + version = "1.11.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1i8szzpmiqc7xdv0lp38ng9fild7c5182b4pzkx4qbydnfgnr3q7"; + }; + + beamDeps = []; + }; + + jumper = buildMix rec { + name = "jumper"; + version = "1.0.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0cvlbfkapkvbwaijmjq3cxg5m6yv4rh69wvss9kfj862i83mk31i"; + }; + + beamDeps = []; + }; + + libring = buildMix rec { + name = "libring"; + version = "1.4.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "10bvf64jkviyyyff12hlhq4p2439gphyvmya8z85m0c6x1gg1shz"; + }; + + beamDeps = []; + }; + + linkify = buildMix rec { + name = "linkify"; + version = "0.5.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1mzjkn0f2svn44fhazkhpaxnwn9hbnqha7z2i4fcbrxfa21rbkac"; + }; + + beamDeps = []; + }; + + makeup = buildMix rec { + name = "makeup"; + version = "1.0.5"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1a9cp9zp85yfybhdxapi9haa1yykzq91bw8abmk0qp1z5p05i8fg"; + }; + + beamDeps = [ nimble_parsec ]; + }; + + makeup_elixir = buildMix rec { + name = "makeup_elixir"; + version = "0.14.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "04fyrd0fcyfvv4i3ngm3gbykhfrp9z6l2p1bhgg9xv7ah0d8nhzj"; + }; + + beamDeps = [ makeup ]; + }; + + makeup_erlang = buildMix rec { + name = "makeup_erlang"; + version = "0.1.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1fvw0zr7vqd94vlj62xbqh0yrih1f7wwnmlj62rz0klax44hhk8p"; + }; + + beamDeps = [ makeup ]; + }; + + meck = buildRebar3 rec { + name = "meck"; + version = "0.9.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "09jq0jrsd3dwzjlnwqjv6m9r2rijgiv57yja6jl41p2p2db4yd41"; + }; + + beamDeps = []; + }; + + metrics = buildRebar3 rec { + name = "metrics"; + version = "1.0.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "05lz15piphyhvvm3d1ldjyw0zsrvz50d2m5f2q3s8x2gvkfrmc39"; + }; + + beamDeps = []; + }; + + mime = buildMix rec { + name = "mime"; + version = "1.6.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "19qrpnmaf3w8bblvkv6z5g82hzd10rhc7bqxvqyi88c37xhsi89i"; + }; + + beamDeps = []; + }; + + mimerl = buildRebar3 rec { + name = "mimerl"; + version = "1.2.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "08wkw73dy449n68ssrkz57gikfzqk3vfnf264s31jn5aa1b5hy7j"; + }; + + beamDeps = []; + }; + + mochiweb = buildRebar3 rec { + name = "mochiweb"; + version = "2.18.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "16j8cfn3hq0g474xc5xl8nk2v46hwvwpfwi9rkzavnsbaqg2ngmr"; + }; + + beamDeps = []; + }; + + mock = buildMix rec { + name = "mock"; + version = "0.3.7"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0p3yrx049fdw88kjidngd2lkwqkkyck5r51ng2dxj7z41539m92d"; + }; + + beamDeps = [ meck ]; + }; + + mogrify = buildMix rec { + name = "mogrify"; + version = "0.7.4"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1hwry2498qflc4g7fdwmxmzb2l0gr5c814ggzddwjsxsgwrrxmsh"; + }; + + beamDeps = []; + }; + + mox = buildMix rec { + name = "mox"; + version = "1.0.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1pzlqq9y4i9i7d0dm8ah2c5a7y2h9649gkz9hfqamnmbnwh0l6r0"; + }; + + beamDeps = []; + }; + + nimble_parsec = buildMix rec { + name = "nimble_parsec"; + version = "0.5.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1cx9p22kkywkg40yqy9xswy4ighdw7i8cc9x1481pzy1d620n12w"; + }; + + beamDeps = []; + }; + + nimble_pool = buildMix rec { + name = "nimble_pool"; + version = "0.1.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1ygkr9ddzd3msif7hkqd75q27zlryhm9zww3191z7p0dcam1wfil"; + }; + + beamDeps = []; + }; + + oban = buildMix rec { + name = "oban"; + version = "2.3.4"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1prgpp7v03lgkia63j60jz3ds479ymm4991f882iizaq8x1s0367"; + }; + + beamDeps = [ ecto_sql jason postgrex telemetry ]; + }; + + open_api_spex = buildMix rec { + name = "open_api_spex"; + version = "3.10.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0rc7q857b8zb9vc4c699arjihca353rzm3bfjc31z0ib7pg2pfrd"; + }; + + beamDeps = [ jason plug poison ]; + }; + + p1_utils = buildRebar3 rec { + name = "p1_utils"; + version = "1.0.18"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "120znzz0yw1994nk6v28zql9plgapqpv51n9g6qm6md1f4x7gj0z"; + }; + + beamDeps = []; + }; + + parse_trans = buildRebar3 rec { + name = "parse_trans"; + version = "3.3.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "12w8ai6b5s6b4hnvkav7hwxd846zdd74r32f84nkcmjzi1vrbk87"; + }; + + beamDeps = []; + }; + + pbkdf2_elixir = buildMix rec { + name = "pbkdf2_elixir"; + version = "1.2.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "07s862m4y74fyv9gwdhrhx04rvpfrwgqkjlyy51b9w1h8r50md6k"; + }; + + beamDeps = [ comeonin ]; + }; + + phoenix = buildMix rec { + name = "phoenix"; + version = "1.5.9"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0za2fpplmdq3axwng8736h6vz9wzlifhxy8apcgjy0bwlqhcwjvy"; + }; + + beamDeps = [ jason phoenix_html phoenix_pubsub plug plug_cowboy plug_crypto telemetry ]; + }; + + phoenix_ecto = buildMix rec { + name = "phoenix_ecto"; + version = "4.2.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1h23fy3pylaszh3l2zafq1a7fjwlwb3yw7dy09p0mb4wi6p1p2j7"; + }; + + beamDeps = [ ecto phoenix_html plug ]; + }; + + phoenix_html = buildMix rec { + name = "phoenix_html"; + version = "2.14.3"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "03z8r285znlg25yi47d4l59s7jq58y4dnhvbxgp16npkzykrgmpg"; + }; + + beamDeps = [ plug ]; + }; + + phoenix_pubsub = buildMix rec { + name = "phoenix_pubsub"; + version = "2.0.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0wgpa19l6xar0k2m117iz2kq3cw433llp07sqswpf5969y698bf5"; + }; + + beamDeps = []; + }; + + phoenix_swoosh = buildMix rec { + name = "phoenix_swoosh"; + version = "0.3.3"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1k81cvhbzbc3czvin45j1rqagzp7drk3s0rp2xa5clz06bm0qm2a"; + }; + + beamDeps = [ hackney phoenix phoenix_html swoosh ]; + }; + + plug = buildMix rec { + name = "plug"; + version = "1.11.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "07w83cx4xx90x4l1kmil4lpby55lpw83jfw3y08pqn5vxx7lwli3"; + }; + + beamDeps = [ mime plug_crypto telemetry ]; + }; + + plug_cowboy = buildMix rec { + name = "plug_cowboy"; + version = "2.5.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "06p7rmx01fknkf0frvjjaqs3qsz6066aa41qyd378n72lljqjb2v"; + }; + + beamDeps = [ cowboy cowboy_telemetry plug telemetry ]; + }; + + plug_crypto = buildMix rec { + name = "plug_crypto"; + version = "1.2.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1nxnxj62iv4yvm4771jbxpj3l4brn2crz053y12s998lv5x1qqw7"; + }; + + beamDeps = []; + }; + + plug_static_index_html = buildMix rec { + name = "plug_static_index_html"; + version = "1.0.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1kxm1flxw3rnsj5jj24c2p23wq1wyblbl32n4rf6046i6k7lzzbr"; + }; + + beamDeps = [ plug ]; + }; + + poison = buildMix rec { + name = "poison"; + version = "3.1.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1kng8xadrs03i77irxvdk9vfncrqzncmgxc5gc8y8gkknw76dj7y"; + }; + + beamDeps = []; + }; + + poolboy = buildRebar3 rec { + name = "poolboy"; + version = "1.5.2"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1qq116314418jp4skxg8c6jx29fwp688a738lgaz6h2lrq29gmys"; + }; + + beamDeps = []; + }; + + postgrex = buildMix rec { + name = "postgrex"; + version = "0.15.9"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1vmd63vxwz8knid424b0rbp200vj7q7rz3xp98yj5cjc7q81j1v1"; + }; + + beamDeps = [ connection db_connection decimal jason ]; + }; + + pot = buildRebar3 rec { + name = "pot"; + version = "1.0.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0vgvpiwiy1gm2npfm3qdybwvg39jllw13aig8ll1bn9icnbzb1zd"; + }; + + beamDeps = []; + }; + + prometheus = buildMix rec { + name = "prometheus"; + version = "4.8.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1dgwd8wxw2cifwmsmjvkbgr1n686n125ssm4b0vxngh70dqy3hhg"; + }; + + beamDeps = []; + }; + + prometheus_ecto = buildMix rec { + name = "prometheus_ecto"; + version = "1.4.3"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "10pd5cmm6m62xwlfp7al8yj62zn181rjizc1v9zb64zrfygjhrld"; + }; + + beamDeps = [ ecto prometheus_ex ]; + }; + + prometheus_phoenix = buildMix rec { + name = "prometheus_phoenix"; + version = "1.3.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0xccdidbzffgy2mpy18p017ijcgav2kv47b0v9ixklz9qi541lf4"; + }; + + beamDeps = [ phoenix prometheus_ex ]; + }; + + prometheus_plugs = buildMix rec { + name = "prometheus_plugs"; + version = "1.1.5"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0ybazh6r52vjpf14gjcphsavl3ggk9iapc0rr9wnv4yb7i4acwq2"; + }; + + beamDeps = [ accept plug prometheus_ex ]; + }; + + quack = buildMix rec { + name = "quack"; + version = "0.1.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0hr5ppds4a9vih14hzs3lfj07r5069w8ifr7022fn4j18jkvydnp"; + }; + + beamDeps = [ poison tesla ]; + }; + + ranch = buildRebar3 rec { + name = "ranch"; + version = "1.8.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1rfz5ld54pkd2w25jadyznia2vb7aw9bclck21fizargd39wzys9"; + }; + + beamDeps = []; + }; + + recon = buildMix rec { + name = "recon"; + version = "2.5.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0j26nin8h3zzypppkdxsjiwgjc8jm8n73b6cikvdh8h1snvcc8ap"; + }; + + beamDeps = []; + }; + + sleeplocks = buildRebar3 rec { + name = "sleeplocks"; + version = "1.1.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1q823i5bisc83pyssgrqkggyxiasm7b8dygzj2r943adzyp3gvl4"; + }; + + beamDeps = []; + }; + + ssl_verify_fun = buildRebar3 rec { + name = "ssl_verify_fun"; + version = "1.1.6"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1026l1z1jh25z8bfrhaw0ryk5gprhrpnirq877zqhg253x3x5c5x"; + }; + + beamDeps = []; + }; + + sweet_xml = buildMix rec { + name = "sweet_xml"; + version = "0.6.6"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0wrm3wx1c4wg8xj8lx1pg9xdpxhsbbry71l3kwgsizwjz1cc87if"; + }; + + beamDeps = []; + }; + + swoosh = buildMix rec { + name = "swoosh"; + version = "1.3.11"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1bqkp41sh4h0q5yjmk0ywf5x979rwxshz16gp619jks5vd4a1qpi"; + }; + + beamDeps = [ cowboy gen_smtp hackney jason mime plug_cowboy ]; + }; + + syslog = buildRebar3 rec { + name = "syslog"; + version = "1.1.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1qarnqappln4xhlr700rhnhfnfvgvv9l3y1ywdxmh83y7hvl2sjc"; + }; + + beamDeps = []; + }; + + telemetry = buildRebar3 rec { + name = "telemetry"; + version = "0.4.3"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0hc0fr2bh97wah9ycpm7hb5jdqr5hnl1s3b2ibbbx9gxbwvbhwpb"; + }; + + beamDeps = []; + }; + + tesla = buildMix rec { + name = "tesla"; + version = "1.4.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "06i0rshkm1byzgsphbr3al4hns7bcrpl1rxy8lwlp31cj8sxxxcm"; + }; + + beamDeps = [ castore gun hackney jason mime poison telemetry ]; + }; + + timex = buildMix rec { + name = "timex"; + version = "3.7.5"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1r3l50p8f8mxgghh079v1y5g02kzqr15ijbi7mkfzwl0lvf0hmm1"; + }; + + beamDeps = [ combine gettext tzdata ]; + }; + + trailing_format_plug = buildMix rec { + name = "trailing_format_plug"; + version = "0.0.7"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0gv9z8m1kpfs5f5zcsh9m6vr36s88x1xc6g0k6lr7sgk2m6dwkxx"; + }; + + beamDeps = [ plug ]; + }; + + tzdata = buildMix rec { + name = "tzdata"; + version = "1.0.5"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0nia83zpk0pb4jkpvhkmmgw8i5p6kd6cf776q6aj0pcym6i9llam"; + }; + + beamDeps = [ hackney ]; + }; + + ueberauth = buildMix rec { + name = "ueberauth"; + version = "0.6.3"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "0q0vz7vlbw66a32d7yij3p5l4a59bi0sygiynn8na38ll7c97hmg"; + }; + + beamDeps = [ plug ]; + }; + + unicode_util_compat = buildRebar3 rec { + name = "unicode_util_compat"; + version = "0.7.0"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "08952lw8cjdw8w171lv8wqbrxc4rcmb3jhkrdb7n06gngpbfdvi5"; + }; + + beamDeps = []; + }; + + unsafe = buildMix rec { + name = "unsafe"; + version = "1.0.1"; + + src = fetchHex { + pkg = "${name}"; + version = "${version}"; + sha256 = "1rahpgz1lsd66r7ycns1ryz2qymamz1anrlps986900lsai2jxvc"; + }; + + beamDeps = []; + }; + }; +in self + diff --git a/third_party/nixpkgs/pkgs/servers/plex/raw.nix b/third_party/nixpkgs/pkgs/servers/plex/raw.nix index 8b9282341b..929abe23cc 100644 --- a/third_party/nixpkgs/pkgs/servers/plex/raw.nix +++ b/third_party/nixpkgs/pkgs/servers/plex/raw.nix @@ -12,16 +12,16 @@ # server, and the FHS userenv and corresponding NixOS module should # automatically pick up the changes. stdenv.mkDerivation rec { - version = "1.23.2.4625-a83d2d0f9"; + version = "1.23.3.4707-ebb5fe9f3"; pname = "plexmediaserver"; # Fetch the source src = if stdenv.hostPlatform.system == "aarch64-linux" then fetchurl { url = "https://downloads.plex.tv/plex-media-server-new/${version}/debian/plexmediaserver_${version}_arm64.deb"; - sha256 = "17md53saxl7x45kgj9wdf7jr61ncnapa418c1lf37qbdqmid343c"; + sha256 = "0b3xsyrpz1098lyqfapnjp7k55d07qg7h9avc7f3zmpkiclxf2ry"; } else fetchurl { url = "https://downloads.plex.tv/plex-media-server-new/${version}/debian/plexmediaserver_${version}_amd64.deb"; - sha256 = "1nisjz4g924di73zjkgwx7nk3gkbykj6bkkgzmlm84dq3rgqnisk"; + sha256 = "1as83prhlfi4g172k3mgm6p8k58zm4bahjf8bp8pyxcmgiii76m0"; }; outputs = [ "out" "basedb" ]; diff --git a/third_party/nixpkgs/pkgs/servers/pr-tracker/default.nix b/third_party/nixpkgs/pkgs/servers/pr-tracker/default.nix index 1bc53f352b..d7bb27b4f2 100644 --- a/third_party/nixpkgs/pkgs/servers/pr-tracker/default.nix +++ b/third_party/nixpkgs/pkgs/servers/pr-tracker/default.nix @@ -1,6 +1,6 @@ { rustPlatform , lib -, fetchgit +, fetchurl , openssl , pkg-config , systemd @@ -8,20 +8,20 @@ rustPlatform.buildRustPackage rec { pname = "pr-tracker"; - version = "1.0.0"; + version = "1.1.0"; - src = fetchgit { - url = "https://git.qyliss.net/pr-tracker"; - rev = version; - sha256 = "sha256-NHtY05Llrvfvcb3uyagLd6kaVW630TIP3IreFrY3wl0="; + src = fetchurl { + url = "https://git.qyliss.net/pr-tracker/snapshot/pr-tracker-${version}.tar.xz"; + sha256 = "0881ckb4y762isisf9d6xk6fh9207xi1i04kays298zx2dq6gh6h"; }; - cargoSha256 = "sha256-SgSASfIanADV31pVy+VIwozTLxq7P3oMDIiAAQ8s+k0="; + cargoSha256 = "0r8pxg65s5jv95a0g8pzr693za7jfb4rv0wc739lkbpf0dssw8sr"; nativeBuildInputs = [ pkg-config ]; buildInputs = [ openssl systemd ]; meta = with lib; { + changelog = "https://git.qyliss.net/pr-tracker/plain/NEWS?h=${version}"; description = "Nixpkgs pull request channel tracker"; longDescription = '' A web server that displays the path a Nixpkgs pull request will take @@ -30,6 +30,6 @@ rustPlatform.buildRustPackage rec { platforms = platforms.linux; homepage = "https://git.qyliss.net/pr-tracker"; license = licenses.agpl3Plus; - maintainers = with maintainers; [ sumnerevans ]; + maintainers = with maintainers; [ qyliss sumnerevans ]; }; } diff --git a/third_party/nixpkgs/pkgs/servers/pulseaudio/default.nix b/third_party/nixpkgs/pkgs/servers/pulseaudio/default.nix index bebe4801c6..10b18dd1ae 100644 --- a/third_party/nixpkgs/pkgs/servers/pulseaudio/default.nix +++ b/third_party/nixpkgs/pkgs/servers/pulseaudio/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, pkg-config, autoreconfHook , libsndfile, libtool, makeWrapper, perlPackages -, xorg, libcap, alsaLib, glib, dconf +, xorg, libcap, alsa-lib, glib, dconf , avahi, libjack2, libasyncns, lirc, dbus , sbc, bluez5, udev, openssl, fftwFloat , soxr, speexdsp, systemd, webrtc-audio-processing @@ -54,7 +54,7 @@ stdenv.mkDerivation rec { ++ lib.optional jackaudioSupport libjack2 ++ lib.optionals x11Support [ xorg.xlibsWrapper xorg.libXtst xorg.libXi ] ++ lib.optional useSystemd systemd - ++ lib.optionals stdenv.isLinux [ alsaLib udev ] + ++ lib.optionals stdenv.isLinux [ alsa-lib udev ] ++ lib.optional airtunesSupport openssl ++ lib.optionals bluetoothSupport [ bluez5 sbc ] ++ lib.optional remoteControlSupport lirc diff --git a/third_party/nixpkgs/pkgs/servers/pulseaudio/pali.nix b/third_party/nixpkgs/pkgs/servers/pulseaudio/pali.nix index cc11f98a82..b07c2fd4ac 100644 --- a/third_party/nixpkgs/pkgs/servers/pulseaudio/pali.nix +++ b/third_party/nixpkgs/pkgs/servers/pulseaudio/pali.nix @@ -11,7 +11,7 @@ , perlPackages , xorg , libcap -, alsaLib +, alsa-lib , glib , dconf , avahi @@ -129,7 +129,7 @@ stdenv.mkDerivation rec { xorg.libXtst xorg.xlibsWrapper ] ++ lib.optionals stdenv.isLinux [ - alsaLib + alsa-lib systemd udev ] ++ lib.optional airtunesSupport openssl diff --git a/third_party/nixpkgs/pkgs/servers/radarr/default.nix b/third_party/nixpkgs/pkgs/servers/radarr/default.nix index f56766d9b6..dd2480de2e 100644 --- a/third_party/nixpkgs/pkgs/servers/radarr/default.nix +++ b/third_party/nixpkgs/pkgs/servers/radarr/default.nix @@ -9,14 +9,14 @@ let }."${stdenv.hostPlatform.system}" or (throw "Unsupported system: ${stdenv.hostPlatform.system}"); hash = { - x64-linux_hash = "sha256-/9W8VwA3d7R2pYH45QvGC1q9f9M9C867nKuhSlU6zsg="; - arm64-linux_hash = "sha256-QjIg+XY5vTmYH+wYqU3VZ5MfxSAcUcGVvapyrlMDbLI="; - x64-osx_hash = "sha256-K17tzGdLKpHkkLSOT3a4FXXfeGz6LJ6cxd20IuJ2zVs="; + x64-linux_hash = "sha256-IwD7PFRz6mjEjUTbpqItorvFMB/hcMcRhHG8XQHv0iM="; + arm64-linux_hash = "sha256-9Ou08PI3HNQO6Da76ZMkzx1QlU+oaq9Tr+vqPT05xnw="; + x64-osx_hash = "sha256-Nfm9vWB+ii2ZST6I4I8Y2PuG2a1qY7rbki57y88Ft8A="; }."${arch}-${os}_hash"; in stdenv.mkDerivation rec { pname = "radarr"; - version = "3.2.1.5070"; + version = "3.2.2.5080"; src = fetchurl { url = "https://github.com/Radarr/Radarr/releases/download/v${version}/Radarr.master.${version}.${os}-core-${arch}.tar.gz"; @@ -26,6 +26,8 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ makeWrapper ]; installPhase = '' + runHook preInstall + mkdir -p $out/{bin,share/${pname}-${version}} cp -r * $out/share/${pname}-${version}/. @@ -33,6 +35,8 @@ in stdenv.mkDerivation rec { --add-flags "$out/share/${pname}-${version}/Radarr.dll" \ --prefix LD_LIBRARY_PATH : ${lib.makeLibraryPath [ curl sqlite libmediainfo mono openssl icu ]} + + runHook postInstall ''; passthru = { diff --git a/third_party/nixpkgs/pkgs/servers/rainloop/default.nix b/third_party/nixpkgs/pkgs/servers/rainloop/default.nix index f86254e93b..bc1f0905c6 100644 --- a/third_party/nixpkgs/pkgs/servers/rainloop/default.nix +++ b/third_party/nixpkgs/pkgs/servers/rainloop/default.nix @@ -2,7 +2,7 @@ common = { edition, sha256 }: stdenv.mkDerivation (rec { pname = "rainloop${lib.optionalString (edition != "") "-${edition}"}"; - version = "1.14.0"; + version = "1.16.0"; nativeBuildInputs = [ unzip ]; @@ -50,10 +50,10 @@ in { rainloop-community = common { edition = "community"; - sha256 = "0a8qafm4khwj8cnaiaxvjb9073w6fr63vk1b89nks4hmfv10jn6y"; + sha256 = "sha256-25ScQ2OwSKAuqg8GomqDhpebhzQZjCk57h6MxUNiymc="; }; rainloop-standard = common { edition = ""; - sha256 = "0961g4mci080f7y98zx9r4qw620l4z3na1ivvlyhhr1v4dywqvch"; + sha256 = "sha256-aYCwqFqhJEeakn4R0MUDGcSp+M47JbbCrbYaML8aeSs="; }; } diff --git a/third_party/nixpkgs/pkgs/servers/reproxy/default.nix b/third_party/nixpkgs/pkgs/servers/reproxy/default.nix index 6c1be8f34c..0d25b42678 100644 --- a/third_party/nixpkgs/pkgs/servers/reproxy/default.nix +++ b/third_party/nixpkgs/pkgs/servers/reproxy/default.nix @@ -2,19 +2,21 @@ buildGoModule rec { pname = "reproxy"; - version = "0.7.0"; + version = "0.8.0"; src = fetchFromGitHub { owner = "umputun"; repo = pname; rev = "v${version}"; - hash = "sha256-TwqfnOKWpFC3fnHNu3/F6KLHuzE7uF6WEgZOArntpWI="; + hash = "sha256-zwQZr6BbvJ2Ol5pCLkZ49j0j5KWTK0N8BybvTr8PPeg="; }; postPatch = '' # Requires network access substituteInPlace app/main_test.go \ --replace "Test_Main" "Skip_Main" + substituteInPlace app/proxy/proxy_test.go \ + --replace "TestHttp_matchHandler" "SkipHttp_matchHandler" '' + lib.optionalString stdenv.isDarwin '' # Fails on Darwin. # https://github.com/umputun/reproxy/issues/77 diff --git a/third_party/nixpkgs/pkgs/servers/roon-bridge/default.nix b/third_party/nixpkgs/pkgs/servers/roon-bridge/default.nix new file mode 100644 index 0000000000..5b469c1cc9 --- /dev/null +++ b/third_party/nixpkgs/pkgs/servers/roon-bridge/default.nix @@ -0,0 +1,66 @@ +{ alsa-lib +, alsa-utils +, autoPatchelfHook +, fetchurl +, lib +, makeWrapper +, stdenv +, zlib +}: + +stdenv.mkDerivation rec { + pname = "roon-bridge"; + version = "1.8-795"; + + # N.B. The URL is unstable. I've asked for them to provide a stable URL but + # they have ignored me. If this package fails to build for you, you may need + # to update the version and sha256. + # c.f. https://community.roonlabs.com/t/latest-roon-server-is-not-available-for-download-on-nixos/118129 + src = fetchurl { + url = "https://web.archive.org/web/20210610172810/http://download.roonlabs.com/builds/RoonBridge_linuxx64.tar.bz2"; + sha256 = "sha256-ahdy0/TBOyMfCt4VTkcDTZGAFmwQJT2KvZuMtFcAY3w="; + }; + + buildInputs = [ + alsa-lib + alsa-utils + zlib + ]; + + nativeBuildInputs = [ autoPatchelfHook makeWrapper ]; + + installPhase = '' + runHook preInstall + mkdir -p $out + mv * $out + runHook postInstall + ''; + + postFixup = + let + linkFix = bin: '' + sed -i '/ulimit/d' ${bin} + sed -i '/ln -sf/d' ${bin} + ln -sf $out/RoonMono/bin/mono-sgen $out/RoonMono/bin/${builtins.baseNameOf bin} + ''; + wrapFix = bin: '' + wrapProgram ${bin} --prefix PATH : ${lib.makeBinPath [ alsa-utils ]} + ''; + in + '' + ${linkFix "$out/Bridge/RAATServer"} + ${linkFix "$out/Bridge/RoonBridge"} + ${linkFix "$out/Bridge/RoonBridgeHelper"} + + ${wrapFix "$out/check.sh"} + ${wrapFix "$out/start.sh"} + ''; + + meta = with lib; { + description = "The music player for music lovers"; + homepage = "https://roonlabs.com"; + license = licenses.unfree; + maintainers = with maintainers; [ lovesegfault ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/servers/roon-server/default.nix b/third_party/nixpkgs/pkgs/servers/roon-server/default.nix index 3fcb8af65e..a6592ee235 100644 --- a/third_party/nixpkgs/pkgs/servers/roon-server/default.nix +++ b/third_party/nixpkgs/pkgs/servers/roon-server/default.nix @@ -1,5 +1,5 @@ -{ alsaLib -, alsaUtils +{ alsa-lib +, alsa-utils , autoPatchelfHook , cifs-utils , fetchurl @@ -10,21 +10,21 @@ , stdenv , zlib }: stdenv.mkDerivation rec { - name = "roon-server"; - version = "100800790"; + pname = "roon-server"; + version = "1.8-795"; # N.B. The URL is unstable. I've asked for them to provide a stable URL but # they have ignored me. If this package fails to build for you, you may need # to update the version and sha256. # c.f. https://community.roonlabs.com/t/latest-roon-server-is-not-available-for-download-on-nixos/118129 src = fetchurl { - url = "https://web.archive.org/web/20210428204513/https://download.roonlabs.com/builds/RoonServer_linuxx64.tar.bz2"; - sha256 = "1jhj52fmkdgr9qfang1i9qrl1z56h56x07k31n3kllknkv02lc8p"; + url = "https://web.archive.org/web/20210610060249/http://download.roonlabs.com/builds/RoonServer_linuxx64.tar.bz2"; + sha256 = "sha256-gC+UquDMyDpgCEYKPp2RRIkHD/4itJssl0hcSEQO5Rc="; }; buildInputs = [ - alsaLib - alsaUtils + alsa-lib + alsa-utils cifs-utils ffmpeg freetype @@ -48,7 +48,7 @@ ln -sf $out/RoonMono/bin/mono-sgen $out/RoonMono/bin/${builtins.baseNameOf bin} ''; wrapFix = bin: '' - wrapProgram ${bin} --prefix PATH : ${lib.makeBinPath [ alsaUtils cifs-utils ffmpeg ]} + wrapProgram ${bin} --prefix PATH : ${lib.makeBinPath [ alsa-utils cifs-utils ffmpeg ]} ''; in '' @@ -64,6 +64,7 @@ meta = with lib; { description = "The music player for music lovers"; + changelog = "https://community.roonlabs.com/c/roon/software-release-notes/18"; homepage = "https://roonlabs.com"; license = licenses.unfree; maintainers = with maintainers; [ lovesegfault steell ]; diff --git a/third_party/nixpkgs/pkgs/servers/sabnzbd/default.nix b/third_party/nixpkgs/pkgs/servers/sabnzbd/default.nix index 14aa161069..3e2592bb09 100644 --- a/third_party/nixpkgs/pkgs/servers/sabnzbd/default.nix +++ b/third_party/nixpkgs/pkgs/servers/sabnzbd/default.nix @@ -20,26 +20,30 @@ let ]); path = lib.makeBinPath [ par2cmdline unrar unzip p7zip ]; in stdenv.mkDerivation rec { - version = "3.2.1"; + version = "3.3.1"; pname = "sabnzbd"; src = fetchFromGitHub { owner = pname; repo = pname; rev = version; - sha256 = "sha256-y2uaXa2DPZHBLukAdwKTwXauaJHX5Uft35vsthzGwME="; + sha256 = "sha256-OcasqRu6nh9hKepMbXVgZ49MeJTlWK+qPSkiBPgmYYo="; }; nativeBuildInputs = [ makeWrapper ]; buildInputs = [ pythonEnv ]; installPhase = '' + runHook preInstall + mkdir -p $out cp -R * $out/ mkdir $out/bin echo "${pythonEnv}/bin/python $out/SABnzbd.py \$*" > $out/bin/sabnzbd chmod +x $out/bin/sabnzbd wrapProgram $out/bin/sabnzbd --set PATH ${path} + + runHook postInstall ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/servers/shairport-sync/default.nix b/third_party/nixpkgs/pkgs/servers/shairport-sync/default.nix index bae2f3aad7..7fdb4bbc86 100644 --- a/third_party/nixpkgs/pkgs/servers/shairport-sync/default.nix +++ b/third_party/nixpkgs/pkgs/servers/shairport-sync/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, autoreconfHook, openssl, avahi, alsaLib +{ lib, stdenv, fetchFromGitHub, autoreconfHook, openssl, avahi, alsa-lib , libdaemon, popt, pkg-config, libconfig, libpulseaudio, soxr }: stdenv.mkDerivation rec { @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { buildInputs = [ openssl avahi - alsaLib + alsa-lib libdaemon popt libconfig diff --git a/third_party/nixpkgs/pkgs/servers/sonarr/default.nix b/third_party/nixpkgs/pkgs/servers/sonarr/default.nix index 2ffbbb2702..49a176e008 100644 --- a/third_party/nixpkgs/pkgs/servers/sonarr/default.nix +++ b/third_party/nixpkgs/pkgs/servers/sonarr/default.nix @@ -2,22 +2,26 @@ stdenv.mkDerivation rec { pname = "sonarr"; - version = "3.0.6.1196"; + version = "3.0.6.1266"; src = fetchurl { url = "https://download.sonarr.tv/v3/main/${version}/Sonarr.main.${version}.linux.tar.gz"; - sha256 = "10fm5s1ayjmj0ip5510rb0nfh08gdaxin0xf2f3qw1z5kxys88fm"; + sha256 = "2YkzmPxJLYClNQnGgheXI8y42ZXAHZUqEpmQ+b2mpfY="; }; nativeBuildInputs = [ makeWrapper ]; installPhase = '' + runHook preInstall + mkdir -p $out/bin cp -r * $out/bin/ makeWrapper "${mono}/bin/mono" $out/bin/NzbDrone \ --add-flags "$out/bin/Sonarr.exe" \ --prefix LD_LIBRARY_PATH : ${lib.makeLibraryPath [ curl sqlite libmediainfo ]} + + runHook postInstall ''; passthru = { diff --git a/third_party/nixpkgs/pkgs/servers/sql/materialize/default.nix b/third_party/nixpkgs/pkgs/servers/sql/materialize/default.nix index e89cd9804a..5a2a3ad8eb 100644 --- a/third_party/nixpkgs/pkgs/servers/sql/materialize/default.nix +++ b/third_party/nixpkgs/pkgs/servers/sql/materialize/default.nix @@ -40,17 +40,17 @@ let in rustPlatform.buildRustPackage rec { pname = "materialize"; - version = "0.7.1"; - rev = "f4bd159fa73d37d44f8ed3f1db13c0c2ff85566f"; + version = "0.8.0"; + rev = "b2fe225f1afcfec4912976bdaa4a44caf3ca0842"; src = fetchFromGitHub { owner = "MaterializeInc"; repo = pname; inherit rev; - hash = "sha256-8nonB/KRv4qOGvJhh0v3UwlBzAXfzb3afeCm/7/E0AU="; + hash = "sha256:09q1bfgsp6j8l8wv2abgibndwfkg2w3nm4dif4qgdkd52fdg0kc5"; }; - cargoSha256 = "sha256-5slgICqLZFqxPymgHvq98BtcD70hfJMr36pvAoQKEJ4="; + cargoSha256 = "sha256:0y2r4980dyajf2ql9vb2jxcsn0a2q0gd3f8v932fgjqw13ysmi0s"; nativeBuildInputs = [ cmake perl pkg-config ] # Provides the mig command used by the krb5-src build script @@ -65,6 +65,7 @@ rustPlatform.buildRustPackage rec { "--skip test_client" "--skip test_client_errors" "--skip test_no_block" + "--skip test_safe_mode" ]; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/servers/sql/patroni/default.nix b/third_party/nixpkgs/pkgs/servers/sql/patroni/default.nix index e02d386126..846e61a5b4 100644 --- a/third_party/nixpkgs/pkgs/servers/sql/patroni/default.nix +++ b/third_party/nixpkgs/pkgs/servers/sql/patroni/default.nix @@ -25,7 +25,7 @@ pythonPackages.buildPythonApplication rec { boto click consul - dns + dnspython kazoo kubernetes prettytable diff --git a/third_party/nixpkgs/pkgs/servers/sql/postgresql/default.nix b/third_party/nixpkgs/pkgs/servers/sql/postgresql/default.nix index 63446a684b..e13c23ddee 100644 --- a/third_party/nixpkgs/pkgs/servers/sql/postgresql/default.nix +++ b/third_party/nixpkgs/pkgs/servers/sql/postgresql/default.nix @@ -196,18 +196,18 @@ let in self: { postgresql_9_6 = self.callPackage generic { - version = "9.6.21"; + version = "9.6.22"; psqlSchema = "9.6"; - sha256 = "0d0ngpadf1i7c0i2psaxcbmiwx8334ibcsn283n9fp4853pyl3wk"; + sha256 = "0c19kzrj5ib5ygmavf5d6qvxdwrxzzz6jz1r2dl5b815208cscix"; this = self.postgresql_9_6; thisAttr = "postgresql_9_6"; inherit self; }; postgresql_10 = self.callPackage generic { - version = "10.16"; + version = "10.17"; psqlSchema = "10.0"; # should be 10, but changing it is invasive - sha256 = "1cvv8qw0gkkczqhiwx6ns7w88dwkvdz4cvb2d4ff14363f5p2p53"; + sha256 = "0v5jahkqm6gkq67s4bac3h7297bscn2ab6y128idi73cc1qq1wjs"; this = self.postgresql_10; thisAttr = "postgresql_10"; inherit self; @@ -215,29 +215,38 @@ in self: { }; postgresql_11 = self.callPackage generic { - version = "11.11"; + version = "11.12"; psqlSchema = "11.1"; # should be 11, but changing it is invasive - sha256 = "0v0qk298nxmpzpgsxcsxma328hdkyzd7fwjs0zsn6zavl5zpnq20"; + sha256 = "016bacpmqxc676ipzc1l8zv1jj44mjz7dv7jhqazg3ibdfqxiyc7"; this = self.postgresql_11; thisAttr = "postgresql_11"; inherit self; }; postgresql_12 = self.callPackage generic { - version = "12.6"; + version = "12.7"; psqlSchema = "12"; - sha256 = "028asz92mi3706zabfs8w9z03mzyx62d1l71qy9zdwfabj6xjzfz"; + sha256 = "15frsmsl1n2i4p76ji0wng4lvnlzw6f01br4cs5xr3n88wgp9444"; this = self.postgresql_12; thisAttr = "postgresql_12"; inherit self; }; postgresql_13 = self.callPackage generic { - version = "13.2"; + version = "13.3"; psqlSchema = "13"; - sha256 = "1z5d847jnajcfr3wa6jn52a8xjhamvwzmz18xlm5nvxqip8grmsz"; + sha256 = "18dliq7h2l8irffhyyhdmfwx3si515q6gds3cxdjb9n7m17lbn9w"; this = self.postgresql_13; thisAttr = "postgresql_13"; inherit self; }; + + postgresql_14 = self.callPackage generic { + version = "14beta1"; + psqlSchema = "14"; + sha256 = "0lih2iykychhvis3mxqyp087m1hld3lyi48n3qwd2js44prxv464"; + this = self.postgresql_14; + thisAttr = "postgresql_14"; + inherit self; + }; } diff --git a/third_party/nixpkgs/pkgs/servers/sql/postgresql/ext/pgvector.nix b/third_party/nixpkgs/pkgs/servers/sql/postgresql/ext/pgvector.nix index 88f1b1ebad..53dfee7d03 100644 --- a/third_party/nixpkgs/pkgs/servers/sql/postgresql/ext/pgvector.nix +++ b/third_party/nixpkgs/pkgs/servers/sql/postgresql/ext/pgvector.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "pgvector"; - version = "0.1.5"; + version = "0.1.7"; src = fetchFromGitHub { owner = "ankane"; repo = pname; rev = "v${version}"; - sha256 = "0zrb9r9yh05nip2gwg96fhfk766hwqwa8plcvj2b4x4hhjk6q1ps"; + sha256 = "07m1nn640by5q22q2s1nlmjp14q5ffbyib28kjzlss0mq8acb439"; }; buildInputs = [ postgresql ]; diff --git a/third_party/nixpkgs/pkgs/servers/tailscale/default.nix b/third_party/nixpkgs/pkgs/servers/tailscale/default.nix index be3b4209eb..56acbf3d22 100644 --- a/third_party/nixpkgs/pkgs/servers/tailscale/default.nix +++ b/third_party/nixpkgs/pkgs/servers/tailscale/default.nix @@ -2,20 +2,20 @@ buildGoModule rec { pname = "tailscale"; - version = "1.8.6"; + version = "1.10.0"; src = fetchFromGitHub { owner = "tailscale"; repo = "tailscale"; rev = "v${version}"; - sha256 = "1h3ry4y62wwcv4z3yjqal4ch4xy40k9s3rq20lqs3r58kblnaxs2"; + sha256 = "0smc2xqbqc2p4jj1c98gzzxbr28sbx8z8625hbrng9m39vwylfxf"; }; nativeBuildInputs = [ makeWrapper ]; CGO_ENABLED = 0; - vendorSha256 = "0cppblz1mnyb3c8xcry5mnf566s6l9409vf9572n1rs1bg91dvgn"; + vendorSha256 = "1mq5bbz9vsxhcrwxpsdnhp8q8zrnp6jpqggn9n5kqr82f3bizwxv"; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/servers/teleport/default.nix b/third_party/nixpkgs/pkgs/servers/teleport/default.nix index 348681799a..d898cc9bcc 100644 --- a/third_party/nixpkgs/pkgs/servers/teleport/default.nix +++ b/third_party/nixpkgs/pkgs/servers/teleport/default.nix @@ -4,21 +4,21 @@ let webassets = fetchFromGitHub { owner = "gravitational"; repo = "webassets"; - rev = "cf396f868aebb8ba654ea2398c25f033181e7114"; - sha256 = "sha256-12jkpWl/kL0ttRHtxyDnKjYAZNrheEGQF8HEGSXvvAk="; + rev = "8a30ee4e3570c7db0566028b6b562167aa40f646"; + sha256 = "sha256-noMVcB1cjiMcRke6/qJIzDaEh4uPIewsedLQRdPbzIQ="; }; in buildGoModule rec { pname = "teleport"; - version = "6.1.3"; + version = "6.2.5"; # This repo has a private submodule "e" which fetchgit cannot handle without failing. src = fetchFromGitHub { owner = "gravitational"; repo = "teleport"; rev = "v${version}"; - sha256 = "sha256-kb7qRPZKXDY0Qy3/72epAGaN2FCOO/XAN8lOoUYkoM0="; + sha256 = "sha256-OBo1TWN7KxI7DAUcRLwXXQjErhhgpLBrJBR55ewKiYw="; }; vendorSha256 = null; diff --git a/third_party/nixpkgs/pkgs/servers/tt-rss/plugin-tumblr-gdpr/default.nix b/third_party/nixpkgs/pkgs/servers/tt-rss/plugin-tumblr-gdpr/default.nix deleted file mode 100644 index 7df8b71759..0000000000 --- a/third_party/nixpkgs/pkgs/servers/tt-rss/plugin-tumblr-gdpr/default.nix +++ /dev/null @@ -1,32 +0,0 @@ -{ lib, stdenv, fetchFromGitHub, ... }: - -stdenv.mkDerivation rec { - pname = "tt-rss-plugin-tumblr-gdpr"; - version = "2.1"; - - src = fetchFromGitHub { - owner = "GregThib"; - repo = "ttrss-tumblr-gdpr"; - rev = "v${version}"; - sha256 = "09cbghi5b6ww4i5677i39qc9rhpq70xmygp0d7x30239r3i23rpq"; - }; - - installPhase = '' - mkdir -p $out/tumblr_gdpr - - cp init.php $out/tumblr_gdpr - ''; - - meta = with lib; { - description = "Plugin for TT-RSS to workaround GDPR in Europe"; - longDescription = '' - Plugin for TT-RSS to workaround GDPR in Europe. - - The name of the plugin in TT-RSS is 'tumblr_gdpr'. - ''; - license = licenses.gpl3; - homepage = "https://github.com/GregThib/ttrss-tumblr-gdpr"; - maintainers = with maintainers; [ das_j ]; - platforms = platforms.all; - }; -} diff --git a/third_party/nixpkgs/pkgs/servers/ucarp/default.nix b/third_party/nixpkgs/pkgs/servers/ucarp/default.nix new file mode 100644 index 0000000000..321a725cc8 --- /dev/null +++ b/third_party/nixpkgs/pkgs/servers/ucarp/default.nix @@ -0,0 +1,28 @@ +{ stdenv, lib, fetchurl, libpcap }: + +stdenv.mkDerivation rec { + pname = "ucarp"; + version = "1.5.2"; + + src = fetchurl { + url = "https://download.pureftpd.org/pub/ucarp/ucarp-${version}.tar.bz2"; + sha256 = "0qidz5sr55nxlmnl8kcbjsrff2j97b44h9l1dmhvvjl46iji7q7j"; + }; + + buildInputs = [ libpcap ]; + + meta = with lib; { + description = "Userspace implementation of CARP"; + longDescription = '' + UCARP allows a couple of hosts to share common virtual IP addresses in + order to provide automatic failover. It is a portable userland + implementation of the secure and patent-free Common Address Redundancy + Protocol (CARP, OpenBSD's alternative to the patents-bloated VRRP). + + Warning: This package has not received any upstream updates for a long + time and can be considered as unmaintained. + ''; + license = with licenses; [ isc bsdOriginal bsd2 gpl2Plus ]; + maintainers = with maintainers; [ oxzi ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/servers/unifi/default.nix b/third_party/nixpkgs/pkgs/servers/unifi/default.nix index aeaa4409aa..0cca27a6be 100644 --- a/third_party/nixpkgs/pkgs/servers/unifi/default.nix +++ b/third_party/nixpkgs/pkgs/servers/unifi/default.nix @@ -52,7 +52,7 @@ in rec { }; unifi6 = generic { - version = "6.1.71"; - sha256 = "1lvsq0xpfgwpbzs25khy7bnrhv8i1jgzi8ij75bsh65hfa3rplc2"; + version = "6.2.25"; + sha256 = "14pfy9cxjyaczdp9lk56by8s5485sjsz2414x7wshf1x76yfjh27"; }; } diff --git a/third_party/nixpkgs/pkgs/servers/web-apps/discourse/default.nix b/third_party/nixpkgs/pkgs/servers/web-apps/discourse/default.nix index 12ae858ea3..5e7c4d5368 100644 --- a/third_party/nixpkgs/pkgs/servers/web-apps/discourse/default.nix +++ b/third_party/nixpkgs/pkgs/servers/web-apps/discourse/default.nix @@ -6,13 +6,13 @@ }: let - version = "2.7.0"; + version = "2.7.4"; src = fetchFromGitHub { owner = "discourse"; repo = "discourse"; rev = "v${version}"; - sha256 = "sha256-w26pwGDL2j7qbporUzZATgw7E//E6xwahCbXv35QNnc="; + sha256 = "sha256-3cvrdWBXRM5F8qFEqbe8ru1U0wBqCkRxK7GAV0beJNk="; }; runtimeDeps = [ diff --git a/third_party/nixpkgs/pkgs/servers/web-apps/discourse/rubyEnv/Gemfile.lock b/third_party/nixpkgs/pkgs/servers/web-apps/discourse/rubyEnv/Gemfile.lock index d3f999d34f..af968cdf33 100644 --- a/third_party/nixpkgs/pkgs/servers/web-apps/discourse/rubyEnv/Gemfile.lock +++ b/third_party/nixpkgs/pkgs/servers/web-apps/discourse/rubyEnv/Gemfile.lock @@ -232,7 +232,7 @@ GEM multipart-post (2.1.1) mustache (1.1.1) nio4r (2.5.7) - nokogiri (1.11.3) + nokogiri (1.11.5) mini_portile2 (~> 2.5.0) racc (~> 1.4) nokogumbo (2.0.5) diff --git a/third_party/nixpkgs/pkgs/servers/web-apps/discourse/rubyEnv/gemset.nix b/third_party/nixpkgs/pkgs/servers/web-apps/discourse/rubyEnv/gemset.nix index 4b3ce8ce21..974df1ed4e 100644 --- a/third_party/nixpkgs/pkgs/servers/web-apps/discourse/rubyEnv/gemset.nix +++ b/third_party/nixpkgs/pkgs/servers/web-apps/discourse/rubyEnv/gemset.nix @@ -1284,10 +1284,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "19d78mdg2lbz9jb4ph6nk783c9jbsdm8rnllwhga6pd53xffp6x0"; + sha256 = "1i80ny61maqzqr1fq5wgpkijmh5j8abisrmhn16kv7mzmxqg5w0m"; type = "gem"; }; - version = "1.11.3"; + version = "1.11.5"; }; nokogumbo = { dependencies = ["nokogiri"]; diff --git a/third_party/nixpkgs/pkgs/servers/web-apps/jitsi-meet/default.nix b/third_party/nixpkgs/pkgs/servers/web-apps/jitsi-meet/default.nix index 719fab87ea..cfe00e59a2 100644 --- a/third_party/nixpkgs/pkgs/servers/web-apps/jitsi-meet/default.nix +++ b/third_party/nixpkgs/pkgs/servers/web-apps/jitsi-meet/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "jitsi-meet"; - version = "1.0.4628"; + version = "1.0.5056"; src = fetchurl { url = "https://download.jitsi.org/jitsi-meet/src/jitsi-meet-${version}.tar.bz2"; - sha256 = "1kw4byy6mvqk3qd5nk5raka1bl9jp0kniszq6j5kc8nz3jql4qdz"; + sha256 = "0vmxy22zpgmvmg84y6rf9s8y3ann1xzhpaipz7fk9z4ykmkj5knw"; }; dontBuild = true; diff --git a/third_party/nixpkgs/pkgs/servers/web-apps/matomo/default.nix b/third_party/nixpkgs/pkgs/servers/web-apps/matomo/default.nix index 9aa56193c7..9a0a1bed0c 100644 --- a/third_party/nixpkgs/pkgs/servers/web-apps/matomo/default.nix +++ b/third_party/nixpkgs/pkgs/servers/web-apps/matomo/default.nix @@ -3,16 +3,16 @@ let versions = { matomo = { - version = "4.2.1"; - sha256 = "d3ea7572c5b42f2636da89b9c15dd7ae16da1d06dab0cea2ed93304a960277ac"; + version = "4.3.1"; + sha256 = "Ve4P1cVV/uZ59BcQaUZLTTOwpjX7veof9jR0l3Y9xOQ="; }; matomo-beta = { - version = "4.2.1"; + version = "4.3.1"; # `beta` examples: "b1", "rc1", null # TOOD when updating: use null if stable version is >= latest beta or release candidate beta = null; - sha256 = "d3ea7572c5b42f2636da89b9c15dd7ae16da1d06dab0cea2ed93304a960277ac"; + sha256 = "Ve4P1cVV/uZ59BcQaUZLTTOwpjX7veof9jR0l3Y9xOQ="; }; }; common = pname: { version, sha256, beta ? null }: diff --git a/third_party/nixpkgs/pkgs/servers/web-apps/mediawiki/default.nix b/third_party/nixpkgs/pkgs/servers/web-apps/mediawiki/default.nix index 50ad9f1e25..d321a3ca11 100644 --- a/third_party/nixpkgs/pkgs/servers/web-apps/mediawiki/default.nix +++ b/third_party/nixpkgs/pkgs/servers/web-apps/mediawiki/default.nix @@ -1,12 +1,12 @@ -{ lib, stdenv, fetchurl, makeWrapper, writeText }: +{ lib, stdenv, fetchurl, writeText }: stdenv.mkDerivation rec { pname = "mediawiki"; - version = "1.35.2"; + version = "1.36.1"; src = with lib; fetchurl { url = "https://releases.wikimedia.org/mediawiki/${versions.majorMinor version}/${pname}-${version}.tar.gz"; - sha256 = "07cch4j2lcncfjv71351c1fxh200p83g2ijb3c9x8rv6nzcmiymz"; + sha256 = "0ymda3x58a7ic4bwhbkxc7rskkwn164nplxzq9g4w9qnmwcqnsg6"; }; prePatch = '' diff --git a/third_party/nixpkgs/pkgs/servers/web-apps/searx/default.nix b/third_party/nixpkgs/pkgs/servers/web-apps/searx/default.nix index 43fb374fe1..3ba6f32704 100644 --- a/third_party/nixpkgs/pkgs/servers/web-apps/searx/default.nix +++ b/third_party/nixpkgs/pkgs/servers/web-apps/searx/default.nix @@ -1,4 +1,4 @@ -{ lib, nixosTests, python3, python3Packages, fetchFromGitHub }: +{ lib, nixosTests, python3, python3Packages, fetchFromGitHub, fetchpatch }: with python3Packages; @@ -14,6 +14,14 @@ toPythonModule (buildPythonApplication rec { sha256 = "0ghkx8g8jnh8yd46p4mlbjn2zm12nx27v7qflr4c8xhlgi0px0mh"; }; + patches = [ + # Fix a crash, remove with the next update + (fetchpatch { + url = "https://github.com/searx/searx/commit/9c10b150963babb7f0b52081693a42b2e61eede9.patch"; + sha256 = "0svp8799628wja2hq59da6rxqi99am8p6hb8y27ciwzsjz0wwba7"; + }) + ]; + postPatch = '' sed -i 's/==.*$//' requirements.txt ''; diff --git a/third_party/nixpkgs/pkgs/servers/web-apps/sogo/default.nix b/third_party/nixpkgs/pkgs/servers/web-apps/sogo/default.nix index 4a73c5770d..20fc0f6f0c 100644 --- a/third_party/nixpkgs/pkgs/servers/web-apps/sogo/default.nix +++ b/third_party/nixpkgs/pkgs/servers/web-apps/sogo/default.nix @@ -1,14 +1,14 @@ { gnustep, lib, fetchFromGitHub, fetchpatch, makeWrapper, python3, lndir -, openssl_1_1, openldap, sope, libmemcached, curl, libsodium, libzip, pkg-config }: +, openssl_1_1, openldap, sope, libmemcached, curl, libsodium, libzip, pkg-config, nixosTests }: with lib; gnustep.stdenv.mkDerivation rec { pname = "SOGo"; - version = "5.0.1"; + version = "5.1.1"; src = fetchFromGitHub { owner = "inverse-inc"; repo = pname; rev = "SOGo-${version}"; - sha256 = "145hdlwnqds5zmpxbh4yainsbv5vy99ji93d6pl7xkbqwncfi80i"; + sha256 = "19qkznk20fi47zxvg24hqnim5bpjlawk76w04jgd93yqakidl8ax"; }; nativeBuildInputs = [ gnustep.make makeWrapper python3 ]; @@ -66,9 +66,11 @@ with lib; gnustep.stdenv.mkDerivation rec { done ''; + passthru.tests.sogo = nixosTests.sogo; + meta = { description = "A very fast and scalable modern collaboration suite (groupware)"; - license = with licenses; [ gpl2 lgpl21 ]; + license = with licenses; [ gpl2Only lgpl21Only ]; homepage = "https://sogo.nu/"; platforms = platforms.linux; maintainers = with maintainers; [ ajs124 das_j ]; diff --git a/third_party/nixpkgs/pkgs/servers/x11/xorg/default.nix b/third_party/nixpkgs/pkgs/servers/x11/xorg/default.nix index 441d8834e0..125c329c4b 100644 --- a/third_party/nixpkgs/pkgs/servers/x11/xorg/default.nix +++ b/third_party/nixpkgs/pkgs/servers/x11/xorg/default.nix @@ -5,8 +5,10 @@ lib.makeScope newScope (self: with self; { inherit pixman; + # THIS IS A GENERATED FILE. DO NOT EDIT! appres = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto, libXt }: stdenv.mkDerivation { - name = "appres-1.0.5"; + pname = "appres"; + version = "1.0.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/appres-1.0.5.tar.bz2"; @@ -18,8 +20,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! bdftopcf = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "bdftopcf-1.1"; + pname = "bdftopcf"; + version = "1.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/bdftopcf-1.1.tar.bz2"; @@ -31,8 +35,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! bitmap = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXaw, xbitmaps, libXmu, xorgproto, libXt }: stdenv.mkDerivation { - name = "bitmap-1.0.9"; + pname = "bitmap"; + version = "1.0.9"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/bitmap-1.0.9.tar.gz"; @@ -44,8 +50,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! editres = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXaw, libXmu, xorgproto, libXt }: stdenv.mkDerivation { - name = "editres-1.0.7"; + pname = "editres"; + version = "1.0.7"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/editres-1.0.7.tar.bz2"; @@ -57,8 +65,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! encodings = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "encodings-1.0.5"; + pname = "encodings"; + version = "1.0.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/encodings-1.0.5.tar.bz2"; @@ -70,8 +80,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontadobe100dpi = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, fontutil, mkfontscale }: stdenv.mkDerivation { - name = "font-adobe-100dpi-1.0.3"; + pname = "font-adobe-100dpi"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-adobe-100dpi-1.0.3.tar.bz2"; @@ -84,8 +96,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontadobe75dpi = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, fontutil, mkfontscale }: stdenv.mkDerivation { - name = "font-adobe-75dpi-1.0.3"; + pname = "font-adobe-75dpi"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-adobe-75dpi-1.0.3.tar.bz2"; @@ -98,8 +112,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontadobeutopia100dpi = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, fontutil, mkfontscale }: stdenv.mkDerivation { - name = "font-adobe-utopia-100dpi-1.0.4"; + pname = "font-adobe-utopia-100dpi"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-adobe-utopia-100dpi-1.0.4.tar.bz2"; @@ -112,8 +128,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontadobeutopia75dpi = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, fontutil, mkfontscale }: stdenv.mkDerivation { - name = "font-adobe-utopia-75dpi-1.0.4"; + pname = "font-adobe-utopia-75dpi"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-adobe-utopia-75dpi-1.0.4.tar.bz2"; @@ -126,8 +144,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontadobeutopiatype1 = callPackage ({ stdenv, pkg-config, fetchurl, mkfontscale }: stdenv.mkDerivation { - name = "font-adobe-utopia-type1-1.0.4"; + pname = "font-adobe-utopia-type1"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-adobe-utopia-type1-1.0.4.tar.bz2"; @@ -140,8 +160,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontalias = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "font-alias-1.0.3"; + pname = "font-alias"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-alias-1.0.3.tar.bz2"; @@ -153,8 +175,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontarabicmisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-arabic-misc-1.0.3"; + pname = "font-arabic-misc"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-arabic-misc-1.0.3.tar.bz2"; @@ -167,8 +191,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontbh100dpi = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, fontutil, mkfontscale }: stdenv.mkDerivation { - name = "font-bh-100dpi-1.0.3"; + pname = "font-bh-100dpi"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-bh-100dpi-1.0.3.tar.bz2"; @@ -181,8 +207,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontbh75dpi = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, fontutil, mkfontscale }: stdenv.mkDerivation { - name = "font-bh-75dpi-1.0.3"; + pname = "font-bh-75dpi"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-bh-75dpi-1.0.3.tar.bz2"; @@ -195,8 +223,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontbhlucidatypewriter100dpi = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, fontutil, mkfontscale }: stdenv.mkDerivation { - name = "font-bh-lucidatypewriter-100dpi-1.0.3"; + pname = "font-bh-lucidatypewriter-100dpi"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-bh-lucidatypewriter-100dpi-1.0.3.tar.bz2"; @@ -209,8 +239,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontbhlucidatypewriter75dpi = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, fontutil, mkfontscale }: stdenv.mkDerivation { - name = "font-bh-lucidatypewriter-75dpi-1.0.3"; + pname = "font-bh-lucidatypewriter-75dpi"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-bh-lucidatypewriter-75dpi-1.0.3.tar.bz2"; @@ -223,8 +255,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontbhttf = callPackage ({ stdenv, pkg-config, fetchurl, mkfontscale }: stdenv.mkDerivation { - name = "font-bh-ttf-1.0.3"; + pname = "font-bh-ttf"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-bh-ttf-1.0.3.tar.bz2"; @@ -237,8 +271,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontbhtype1 = callPackage ({ stdenv, pkg-config, fetchurl, mkfontscale }: stdenv.mkDerivation { - name = "font-bh-type1-1.0.3"; + pname = "font-bh-type1"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-bh-type1-1.0.3.tar.bz2"; @@ -251,8 +287,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontbitstream100dpi = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-bitstream-100dpi-1.0.3"; + pname = "font-bitstream-100dpi"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-bitstream-100dpi-1.0.3.tar.bz2"; @@ -265,8 +303,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontbitstream75dpi = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-bitstream-75dpi-1.0.3"; + pname = "font-bitstream-75dpi"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-bitstream-75dpi-1.0.3.tar.bz2"; @@ -279,8 +319,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontbitstreamtype1 = callPackage ({ stdenv, pkg-config, fetchurl, mkfontscale }: stdenv.mkDerivation { - name = "font-bitstream-type1-1.0.3"; + pname = "font-bitstream-type1"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-bitstream-type1-1.0.3.tar.bz2"; @@ -293,8 +335,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontcronyxcyrillic = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-cronyx-cyrillic-1.0.3"; + pname = "font-cronyx-cyrillic"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-cronyx-cyrillic-1.0.3.tar.bz2"; @@ -307,8 +351,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontcursormisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-cursor-misc-1.0.3"; + pname = "font-cursor-misc"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-cursor-misc-1.0.3.tar.bz2"; @@ -321,8 +367,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontdaewoomisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-daewoo-misc-1.0.3"; + pname = "font-daewoo-misc"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-daewoo-misc-1.0.3.tar.bz2"; @@ -335,8 +383,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontdecmisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-dec-misc-1.0.3"; + pname = "font-dec-misc"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-dec-misc-1.0.3.tar.bz2"; @@ -349,8 +399,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontibmtype1 = callPackage ({ stdenv, pkg-config, fetchurl, mkfontscale }: stdenv.mkDerivation { - name = "font-ibm-type1-1.0.3"; + pname = "font-ibm-type1"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-ibm-type1-1.0.3.tar.bz2"; @@ -363,8 +415,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontisasmisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-isas-misc-1.0.3"; + pname = "font-isas-misc"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-isas-misc-1.0.3.tar.bz2"; @@ -377,8 +431,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontjismisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-jis-misc-1.0.3"; + pname = "font-jis-misc"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-jis-misc-1.0.3.tar.bz2"; @@ -391,8 +447,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontmicromisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-micro-misc-1.0.3"; + pname = "font-micro-misc"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-micro-misc-1.0.3.tar.bz2"; @@ -405,8 +463,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontmisccyrillic = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-misc-cyrillic-1.0.3"; + pname = "font-misc-cyrillic"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-misc-cyrillic-1.0.3.tar.bz2"; @@ -419,8 +479,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontmiscethiopic = callPackage ({ stdenv, pkg-config, fetchurl, mkfontscale }: stdenv.mkDerivation { - name = "font-misc-ethiopic-1.0.3"; + pname = "font-misc-ethiopic"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-misc-ethiopic-1.0.3.tar.bz2"; @@ -433,8 +495,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontmiscmeltho = callPackage ({ stdenv, pkg-config, fetchurl, mkfontscale }: stdenv.mkDerivation { - name = "font-misc-meltho-1.0.3"; + pname = "font-misc-meltho"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-misc-meltho-1.0.3.tar.bz2"; @@ -447,8 +511,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontmiscmisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, fontutil, mkfontscale }: stdenv.mkDerivation { - name = "font-misc-misc-1.1.2"; + pname = "font-misc-misc"; + version = "1.1.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-misc-misc-1.1.2.tar.bz2"; @@ -461,8 +527,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontmuttmisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-mutt-misc-1.0.3"; + pname = "font-mutt-misc"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-mutt-misc-1.0.3.tar.bz2"; @@ -475,8 +543,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontschumachermisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, fontutil, mkfontscale }: stdenv.mkDerivation { - name = "font-schumacher-misc-1.1.2"; + pname = "font-schumacher-misc"; + version = "1.1.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-schumacher-misc-1.1.2.tar.bz2"; @@ -489,8 +559,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontscreencyrillic = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-screen-cyrillic-1.0.4"; + pname = "font-screen-cyrillic"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-screen-cyrillic-1.0.4.tar.bz2"; @@ -503,8 +575,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontsonymisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-sony-misc-1.0.3"; + pname = "font-sony-misc"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-sony-misc-1.0.3.tar.bz2"; @@ -517,8 +591,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontsunmisc = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-sun-misc-1.0.3"; + pname = "font-sun-misc"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-sun-misc-1.0.3.tar.bz2"; @@ -531,12 +607,14 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fonttosfnt = callPackage ({ stdenv, pkg-config, fetchurl, libfontenc, freetype, xorgproto }: stdenv.mkDerivation { - name = "fonttosfnt-1.2.1"; + pname = "fonttosfnt"; + version = "1.2.2"; builder = ./builder.sh; src = fetchurl { - url = "mirror://xorg/individual/app/fonttosfnt-1.2.1.tar.bz2"; - sha256 = "16r51h5wfy85wnbq3q8v8a184hb25c3ksjgix0mlcywdz7qkbj07"; + url = "mirror://xorg/individual/app/fonttosfnt-1.2.2.tar.bz2"; + sha256 = "0r1s43ypy0a9z6hzdq5y02s2acj965rax4flwdyylvc54ppv86qs"; }; hardeningDisable = [ "bindnow" "relro" ]; nativeBuildInputs = [ pkg-config ]; @@ -544,8 +622,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontutil = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "font-util-1.3.1"; + pname = "font-util"; + version = "1.3.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-util-1.3.1.tar.bz2"; @@ -557,8 +637,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontwinitzkicyrillic = callPackage ({ stdenv, pkg-config, fetchurl, bdftopcf, mkfontscale }: stdenv.mkDerivation { - name = "font-winitzki-cyrillic-1.0.3"; + pname = "font-winitzki-cyrillic"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-winitzki-cyrillic-1.0.3.tar.bz2"; @@ -571,8 +653,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! fontxfree86type1 = callPackage ({ stdenv, pkg-config, fetchurl, mkfontscale }: stdenv.mkDerivation { - name = "font-xfree86-type1-1.0.4"; + pname = "font-xfree86-type1"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/font/font-xfree86-type1-1.0.4.tar.bz2"; @@ -585,8 +669,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! gccmakedep = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "gccmakedep-1.0.3"; + pname = "gccmakedep"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/util/gccmakedep-1.0.3.tar.bz2"; @@ -598,8 +684,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! iceauth = callPackage ({ stdenv, pkg-config, fetchurl, libICE, xorgproto }: stdenv.mkDerivation { - name = "iceauth-1.0.8"; + pname = "iceauth"; + version = "1.0.8"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/iceauth-1.0.8.tar.bz2"; @@ -611,8 +699,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! ico = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto }: stdenv.mkDerivation { - name = "ico-1.0.5"; + pname = "ico"; + version = "1.0.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/ico-1.0.5.tar.bz2"; @@ -624,8 +714,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! imake = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto }: stdenv.mkDerivation { - name = "imake-1.0.8"; + pname = "imake"; + version = "1.0.8"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/util/imake-1.0.8.tar.bz2"; @@ -637,8 +729,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libAppleWM = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext }: stdenv.mkDerivation { - name = "libAppleWM-1.4.1"; + pname = "libAppleWM"; + version = "1.4.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libAppleWM-1.4.1.tar.bz2"; @@ -650,8 +744,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libFS = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xtrans }: stdenv.mkDerivation { - name = "libFS-1.0.8"; + pname = "libFS"; + version = "1.0.8"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libFS-1.0.8.tar.bz2"; @@ -663,8 +759,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libICE = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xtrans }: stdenv.mkDerivation { - name = "libICE-1.0.10"; + pname = "libICE"; + version = "1.0.10"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libICE-1.0.10.tar.bz2"; @@ -676,8 +774,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libSM = callPackage ({ stdenv, pkg-config, fetchurl, libICE, libuuid, xorgproto, xtrans }: stdenv.mkDerivation { - name = "libSM-1.2.3"; + pname = "libSM"; + version = "1.2.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libSM-1.2.3.tar.bz2"; @@ -689,8 +789,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libWindowsWM = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext }: stdenv.mkDerivation { - name = "libWindowsWM-1.0.1"; + pname = "libWindowsWM"; + version = "1.0.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libWindowsWM-1.0.1.tar.bz2"; @@ -702,12 +804,14 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libX11 = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libxcb, xtrans }: stdenv.mkDerivation { - name = "libX11-1.7.0"; + pname = "libX11"; + version = "1.7.2"; builder = ./builder.sh; src = fetchurl { - url = "mirror://xorg/individual/lib/libX11-1.7.0.tar.bz2"; - sha256 = "0m6bfwllr3pq2c00l51y62yiq15kphc8dw69zf67qhwmclxzkj1n"; + url = "mirror://xorg/individual/lib/libX11-1.7.2.tar.bz2"; + sha256 = "0v7aj8q3rlchdyfwdna7n7vgpyzyir391dlv5rwy9fxagbikbyhw"; }; hardeningDisable = [ "bindnow" "relro" ]; nativeBuildInputs = [ pkg-config ]; @@ -715,8 +819,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXScrnSaver = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext }: stdenv.mkDerivation { - name = "libXScrnSaver-1.2.3"; + pname = "libXScrnSaver"; + version = "1.2.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXScrnSaver-1.2.3.tar.bz2"; @@ -728,8 +834,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXTrap = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext, libXt }: stdenv.mkDerivation { - name = "libXTrap-1.0.1"; + pname = "libXTrap"; + version = "1.0.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXTrap-1.0.1.tar.bz2"; @@ -741,8 +849,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXau = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto }: stdenv.mkDerivation { - name = "libXau-1.0.9"; + pname = "libXau"; + version = "1.0.9"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXau-1.0.9.tar.bz2"; @@ -754,8 +864,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXaw = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, xorgproto, libXmu, libXpm, libXt }: stdenv.mkDerivation { - name = "libXaw-1.0.14"; + pname = "libXaw"; + version = "1.0.14"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXaw-1.0.14.tar.bz2"; @@ -767,8 +879,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXaw3d = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, libXmu, libXpm, xorgproto, libXt }: stdenv.mkDerivation { - name = "libXaw3d-1.6.3"; + pname = "libXaw3d"; + version = "1.6.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXaw3d-1.6.3.tar.bz2"; @@ -780,8 +894,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXcomposite = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXfixes }: stdenv.mkDerivation { - name = "libXcomposite-0.4.5"; + pname = "libXcomposite"; + version = "0.4.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXcomposite-0.4.5.tar.bz2"; @@ -793,8 +909,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXcursor = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXfixes, libXrender }: stdenv.mkDerivation { - name = "libXcursor-1.2.0"; + pname = "libXcursor"; + version = "1.2.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXcursor-1.2.0.tar.bz2"; @@ -806,8 +924,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXdamage = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXfixes }: stdenv.mkDerivation { - name = "libXdamage-1.1.5"; + pname = "libXdamage"; + version = "1.1.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXdamage-1.1.5.tar.bz2"; @@ -819,8 +939,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXdmcp = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto }: stdenv.mkDerivation { - name = "libXdmcp-1.1.3"; + pname = "libXdmcp"; + version = "1.1.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXdmcp-1.1.3.tar.bz2"; @@ -832,8 +954,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXext = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto }: stdenv.mkDerivation { - name = "libXext-1.3.4"; + pname = "libXext"; + version = "1.3.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXext-1.3.4.tar.bz2"; @@ -845,12 +969,14 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXfixes = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11 }: stdenv.mkDerivation { - name = "libXfixes-5.0.3"; + pname = "libXfixes"; + version = "6.0.0"; builder = ./builder.sh; src = fetchurl { - url = "mirror://xorg/individual/lib/libXfixes-5.0.3.tar.bz2"; - sha256 = "1miana3y4hwdqdparsccmygqr3ic3hs5jrqfzp70hvi2zwxd676y"; + url = "mirror://xorg/individual/lib/libXfixes-6.0.0.tar.bz2"; + sha256 = "0k2v4i4r24y3kdr5ici1qqhp69djnja919xfqp54c2rylm6s5hd7"; }; hardeningDisable = [ "bindnow" "relro" ]; nativeBuildInputs = [ pkg-config ]; @@ -858,8 +984,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXfont = callPackage ({ stdenv, pkg-config, fetchurl, libfontenc, xorgproto, freetype, xtrans, zlib }: stdenv.mkDerivation { - name = "libXfont-1.5.4"; + pname = "libXfont"; + version = "1.5.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXfont-1.5.4.tar.bz2"; @@ -871,8 +999,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXfont2 = callPackage ({ stdenv, pkg-config, fetchurl, libfontenc, xorgproto, freetype, xtrans, zlib }: stdenv.mkDerivation { - name = "libXfont2-2.0.4"; + pname = "libXfont2"; + version = "2.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXfont2-2.0.4.tar.bz2"; @@ -884,8 +1014,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXft = callPackage ({ stdenv, pkg-config, fetchurl, fontconfig, freetype, libX11, xorgproto, libXrender }: stdenv.mkDerivation { - name = "libXft-2.3.3"; + pname = "libXft"; + version = "2.3.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXft-2.3.3.tar.bz2"; @@ -897,8 +1029,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXi = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext, libXfixes }: stdenv.mkDerivation { - name = "libXi-1.7.10"; + pname = "libXi"; + version = "1.7.10"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXi-1.7.10.tar.bz2"; @@ -910,8 +1044,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXinerama = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, xorgproto }: stdenv.mkDerivation { - name = "libXinerama-1.1.4"; + pname = "libXinerama"; + version = "1.1.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXinerama-1.1.4.tar.bz2"; @@ -923,8 +1059,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXmu = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, xorgproto, libXt }: stdenv.mkDerivation { - name = "libXmu-1.1.3"; + pname = "libXmu"; + version = "1.1.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXmu-1.1.3.tar.bz2"; @@ -936,8 +1074,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXp = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXau, libXext }: stdenv.mkDerivation { - name = "libXp-1.0.3"; + pname = "libXp"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXp-1.0.3.tar.bz2"; @@ -949,8 +1089,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXpm = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, xorgproto, libXt, gettext }: stdenv.mkDerivation { - name = "libXpm-3.5.13"; + pname = "libXpm"; + version = "3.5.13"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXpm-3.5.13.tar.bz2"; @@ -962,8 +1104,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXpresent = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11 }: stdenv.mkDerivation { - name = "libXpresent-1.0.0"; + pname = "libXpresent"; + version = "1.0.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXpresent-1.0.0.tar.bz2"; @@ -975,8 +1119,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXrandr = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext, libXrender }: stdenv.mkDerivation { - name = "libXrandr-1.5.2"; + pname = "libXrandr"; + version = "1.5.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXrandr-1.5.2.tar.bz2"; @@ -988,8 +1134,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXrender = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11 }: stdenv.mkDerivation { - name = "libXrender-0.9.10"; + pname = "libXrender"; + version = "0.9.10"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXrender-0.9.10.tar.bz2"; @@ -1001,8 +1149,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXres = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext }: stdenv.mkDerivation { - name = "libXres-1.2.1"; + pname = "libXres"; + version = "1.2.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXres-1.2.1.tar.bz2"; @@ -1014,8 +1164,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXt = callPackage ({ stdenv, pkg-config, fetchurl, libICE, xorgproto, libSM, libX11 }: stdenv.mkDerivation { - name = "libXt-1.2.1"; + pname = "libXt"; + version = "1.2.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXt-1.2.1.tar.bz2"; @@ -1027,8 +1179,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXtst = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext, libXi }: stdenv.mkDerivation { - name = "libXtst-1.2.3"; + pname = "libXtst"; + version = "1.2.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXtst-1.2.3.tar.bz2"; @@ -1040,8 +1194,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXv = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext }: stdenv.mkDerivation { - name = "libXv-1.0.11"; + pname = "libXv"; + version = "1.0.11"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXv-1.0.11.tar.bz2"; @@ -1053,8 +1209,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXvMC = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext, libXv }: stdenv.mkDerivation { - name = "libXvMC-1.0.12"; + pname = "libXvMC"; + version = "1.0.12"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXvMC-1.0.12.tar.bz2"; @@ -1066,8 +1224,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXxf86dga = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, xorgproto }: stdenv.mkDerivation { - name = "libXxf86dga-1.1.5"; + pname = "libXxf86dga"; + version = "1.1.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXxf86dga-1.1.5.tar.bz2"; @@ -1079,8 +1239,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXxf86misc = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, xorgproto }: stdenv.mkDerivation { - name = "libXxf86misc-1.0.4"; + pname = "libXxf86misc"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXxf86misc-1.0.4.tar.bz2"; @@ -1092,8 +1254,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libXxf86vm = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, xorgproto }: stdenv.mkDerivation { - name = "libXxf86vm-1.1.4"; + pname = "libXxf86vm"; + version = "1.1.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libXxf86vm-1.1.4.tar.bz2"; @@ -1105,8 +1269,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libdmx = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext }: stdenv.mkDerivation { - name = "libdmx-1.1.4"; + pname = "libdmx"; + version = "1.1.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libdmx-1.1.4.tar.bz2"; @@ -1118,8 +1284,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libfontenc = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, zlib }: stdenv.mkDerivation { - name = "libfontenc-1.1.4"; + pname = "libfontenc"; + version = "1.1.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libfontenc-1.1.4.tar.bz2"; @@ -1131,8 +1299,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libpciaccess = callPackage ({ stdenv, pkg-config, fetchurl, zlib }: stdenv.mkDerivation { - name = "libpciaccess-0.16"; + pname = "libpciaccess"; + version = "0.16"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libpciaccess-0.16.tar.bz2"; @@ -1144,8 +1314,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libpthreadstubs = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "libpthread-stubs-0.4"; + pname = "libpthread-stubs"; + version = "0.4"; builder = ./builder.sh; src = fetchurl { url = "https://xcb.freedesktop.org/dist/libpthread-stubs-0.4.tar.bz2"; @@ -1157,8 +1329,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libxcb = callPackage ({ stdenv, pkg-config, fetchurl, libxslt, libpthreadstubs, libXau, xcbproto, libXdmcp, python3 }: stdenv.mkDerivation { - name = "libxcb-1.14"; + pname = "libxcb"; + version = "1.14"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libxcb-1.14.tar.xz"; @@ -1170,8 +1344,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libxkbfile = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11 }: stdenv.mkDerivation { - name = "libxkbfile-1.1.0"; + pname = "libxkbfile"; + version = "1.1.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libxkbfile-1.1.0.tar.bz2"; @@ -1183,8 +1359,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! libxshmfence = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto }: stdenv.mkDerivation { - name = "libxshmfence-1.3"; + pname = "libxshmfence"; + version = "1.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/libxshmfence-1.3.tar.bz2"; @@ -1196,8 +1374,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! listres = callPackage ({ stdenv, pkg-config, fetchurl, libXaw, libXmu, xorgproto, libXt }: stdenv.mkDerivation { - name = "listres-1.0.4"; + pname = "listres"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/listres-1.0.4.tar.bz2"; @@ -1209,8 +1389,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! lndir = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto }: stdenv.mkDerivation { - name = "lndir-1.0.3"; + pname = "lndir"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/util/lndir-1.0.3.tar.bz2"; @@ -1222,8 +1404,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! luit = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "luit-20190106"; + pname = "luit"; + version = "20190106"; builder = ./builder.sh; src = fetchurl { url = "https://invisible-mirror.net/archives/luit/luit-20190106.tgz"; @@ -1235,8 +1419,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! makedepend = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto }: stdenv.mkDerivation { - name = "makedepend-1.0.6"; + pname = "makedepend"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/util/makedepend-1.0.6.tar.bz2"; @@ -1248,8 +1434,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! mkfontscale = callPackage ({ stdenv, pkg-config, fetchurl, libfontenc, freetype, xorgproto, zlib }: stdenv.mkDerivation { - name = "mkfontscale-1.2.1"; + pname = "mkfontscale"; + version = "1.2.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/mkfontscale-1.2.1.tar.bz2"; @@ -1261,8 +1449,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! oclock = callPackage ({ stdenv, pkg-config, fetchurl, libxkbfile, libX11, libXext, libXmu, libXt }: stdenv.mkDerivation { - name = "oclock-1.0.4"; + pname = "oclock"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/oclock-1.0.4.tar.bz2"; @@ -1274,8 +1464,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! sessreg = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto }: stdenv.mkDerivation { - name = "sessreg-1.1.2"; + pname = "sessreg"; + version = "1.1.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/sessreg-1.1.2.tar.bz2"; @@ -1287,8 +1479,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! setxkbmap = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libxkbfile }: stdenv.mkDerivation { - name = "setxkbmap-1.3.2"; + pname = "setxkbmap"; + version = "1.3.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/setxkbmap-1.3.2.tar.bz2"; @@ -1300,8 +1494,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! smproxy = callPackage ({ stdenv, pkg-config, fetchurl, libICE, libSM, libXmu, libXt }: stdenv.mkDerivation { - name = "smproxy-1.0.6"; + pname = "smproxy"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/smproxy-1.0.6.tar.bz2"; @@ -1313,8 +1509,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! transset = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto }: stdenv.mkDerivation { - name = "transset-1.0.2"; + pname = "transset"; + version = "1.0.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/transset-1.0.2.tar.bz2"; @@ -1326,8 +1524,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! twm = callPackage ({ stdenv, pkg-config, fetchurl, libICE, libSM, libX11, libXext, libXmu, xorgproto, libXt }: stdenv.mkDerivation { - name = "twm-1.0.10"; + pname = "twm"; + version = "1.0.10"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/twm-1.0.10.tar.bz2"; @@ -1339,8 +1539,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! utilmacros = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "util-macros-1.19.3"; + pname = "util-macros"; + version = "1.19.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/util/util-macros-1.19.3.tar.bz2"; @@ -1352,8 +1554,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! viewres = callPackage ({ stdenv, pkg-config, fetchurl, libXaw, libXmu, libXt }: stdenv.mkDerivation { - name = "viewres-1.0.5"; + pname = "viewres"; + version = "1.0.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/viewres-1.0.5.tar.bz2"; @@ -1365,8 +1569,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! x11perf = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, libXft, libXmu, xorgproto, libXrender }: stdenv.mkDerivation { - name = "x11perf-1.6.1"; + pname = "x11perf"; + version = "1.6.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/x11perf-1.6.1.tar.bz2"; @@ -1378,8 +1584,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xauth = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXau, libXext, libXmu, xorgproto }: stdenv.mkDerivation { - name = "xauth-1.1"; + pname = "xauth"; + version = "1.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xauth-1.1.tar.bz2"; @@ -1391,8 +1599,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xbacklight = callPackage ({ stdenv, pkg-config, fetchurl, libxcb, xcbutil }: stdenv.mkDerivation { - name = "xbacklight-1.2.3"; + pname = "xbacklight"; + version = "1.2.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xbacklight-1.2.3.tar.bz2"; @@ -1404,8 +1614,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xbitmaps = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "xbitmaps-1.1.2"; + pname = "xbitmaps"; + version = "1.1.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/data/xbitmaps-1.1.2.tar.bz2"; @@ -1417,8 +1629,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcalc = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXaw, xorgproto, libXt }: stdenv.mkDerivation { - name = "xcalc-1.1.0"; + pname = "xcalc"; + version = "1.1.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xcalc-1.1.0.tar.bz2"; @@ -1430,8 +1644,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcbproto = callPackage ({ stdenv, pkg-config, fetchurl, python3 }: stdenv.mkDerivation { - name = "xcb-proto-1.14.1"; + pname = "xcb-proto"; + version = "1.14.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/proto/xcb-proto-1.14.1.tar.xz"; @@ -1443,8 +1659,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcbutil = callPackage ({ stdenv, pkg-config, fetchurl, gperf, libxcb, xorgproto, m4 }: stdenv.mkDerivation { - name = "xcb-util-0.4.0"; + pname = "xcb-util"; + version = "0.4.0"; builder = ./builder.sh; src = fetchurl { url = "https://xcb.freedesktop.org/dist/xcb-util-0.4.0.tar.bz2"; @@ -1456,8 +1674,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcbutilcursor = callPackage ({ stdenv, pkg-config, fetchurl, gperf, libxcb, xcbutilimage, xcbutilrenderutil, xorgproto, m4 }: stdenv.mkDerivation { - name = "xcb-util-cursor-0.1.3"; + pname = "xcb-util-cursor"; + version = "0.1.3"; builder = ./builder.sh; src = fetchurl { url = "https://xcb.freedesktop.org/dist/xcb-util-cursor-0.1.3.tar.bz2"; @@ -1469,8 +1689,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcbutilerrors = callPackage ({ stdenv, pkg-config, fetchurl, gperf, libxcb, xcbproto, xorgproto, m4 }: stdenv.mkDerivation { - name = "xcb-util-errors-1.0"; + pname = "xcb-util-errors"; + version = "1.0"; builder = ./builder.sh; src = fetchurl { url = "https://xcb.freedesktop.org/dist/xcb-util-errors-1.0.tar.bz2"; @@ -1482,8 +1704,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcbutilimage = callPackage ({ stdenv, pkg-config, fetchurl, gperf, libxcb, xcbutil, xorgproto, m4 }: stdenv.mkDerivation { - name = "xcb-util-image-0.4.0"; + pname = "xcb-util-image"; + version = "0.4.0"; builder = ./builder.sh; src = fetchurl { url = "https://xcb.freedesktop.org/dist/xcb-util-image-0.4.0.tar.bz2"; @@ -1495,8 +1719,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcbutilkeysyms = callPackage ({ stdenv, pkg-config, fetchurl, gperf, libxcb, xorgproto, m4 }: stdenv.mkDerivation { - name = "xcb-util-keysyms-0.4.0"; + pname = "xcb-util-keysyms"; + version = "0.4.0"; builder = ./builder.sh; src = fetchurl { url = "https://xcb.freedesktop.org/dist/xcb-util-keysyms-0.4.0.tar.bz2"; @@ -1508,8 +1734,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcbutilrenderutil = callPackage ({ stdenv, pkg-config, fetchurl, gperf, libxcb, xorgproto, m4 }: stdenv.mkDerivation { - name = "xcb-util-renderutil-0.3.9"; + pname = "xcb-util-renderutil"; + version = "0.3.9"; builder = ./builder.sh; src = fetchurl { url = "https://xcb.freedesktop.org/dist/xcb-util-renderutil-0.3.9.tar.bz2"; @@ -1521,8 +1749,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcbutilwm = callPackage ({ stdenv, pkg-config, fetchurl, gperf, libxcb, xorgproto, m4 }: stdenv.mkDerivation { - name = "xcb-util-wm-0.4.1"; + pname = "xcb-util-wm"; + version = "0.4.1"; builder = ./builder.sh; src = fetchurl { url = "https://xcb.freedesktop.org/dist/xcb-util-wm-0.4.1.tar.bz2"; @@ -1534,8 +1764,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xclock = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXaw, libXft, libxkbfile, libXmu, xorgproto, libXrender, libXt }: stdenv.mkDerivation { - name = "xclock-1.0.9"; + pname = "xclock"; + version = "1.0.9"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xclock-1.0.9.tar.bz2"; @@ -1547,8 +1779,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcmsdb = callPackage ({ stdenv, pkg-config, fetchurl, libX11 }: stdenv.mkDerivation { - name = "xcmsdb-1.0.5"; + pname = "xcmsdb"; + version = "1.0.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xcmsdb-1.0.5.tar.bz2"; @@ -1560,8 +1794,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcompmgr = callPackage ({ stdenv, pkg-config, fetchurl, libXcomposite, libXdamage, libXext, libXfixes, libXrender }: stdenv.mkDerivation { - name = "xcompmgr-1.1.8"; + pname = "xcompmgr"; + version = "1.1.8"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xcompmgr-1.1.8.tar.bz2"; @@ -1573,8 +1809,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xconsole = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXaw, libXmu, xorgproto, libXt }: stdenv.mkDerivation { - name = "xconsole-1.0.7"; + pname = "xconsole"; + version = "1.0.7"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xconsole-1.0.7.tar.bz2"; @@ -1586,8 +1824,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcursorgen = callPackage ({ stdenv, pkg-config, fetchurl, libpng, libX11, libXcursor }: stdenv.mkDerivation { - name = "xcursorgen-1.0.7"; + pname = "xcursorgen"; + version = "1.0.7"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xcursorgen-1.0.7.tar.bz2"; @@ -1599,8 +1839,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xcursorthemes = callPackage ({ stdenv, pkg-config, fetchurl, libXcursor }: stdenv.mkDerivation { - name = "xcursor-themes-1.0.6"; + pname = "xcursor-themes"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/data/xcursor-themes-1.0.6.tar.bz2"; @@ -1612,8 +1854,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xdm = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXau, libXaw, libXdmcp, libXext, libXft, libXinerama, libXmu, libXpm, xorgproto, libXrender, libXt }: stdenv.mkDerivation { - name = "xdm-1.1.12"; + pname = "xdm"; + version = "1.1.12"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xdm-1.1.12.tar.bz2"; @@ -1625,8 +1869,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xdpyinfo = callPackage ({ stdenv, pkg-config, fetchurl, libdmx, libX11, libxcb, libXcomposite, libXext, libXi, libXinerama, xorgproto, libXrender, libXtst, libXxf86dga, libXxf86misc, libXxf86vm }: stdenv.mkDerivation { - name = "xdpyinfo-1.3.2"; + pname = "xdpyinfo"; + version = "1.3.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xdpyinfo-1.3.2.tar.bz2"; @@ -1638,8 +1884,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xdriinfo = callPackage ({ stdenv, pkg-config, fetchurl, libGL, xorgproto, libX11 }: stdenv.mkDerivation { - name = "xdriinfo-1.0.6"; + pname = "xdriinfo"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xdriinfo-1.0.6.tar.bz2"; @@ -1651,8 +1899,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xev = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto, libXrandr }: stdenv.mkDerivation { - name = "xev-1.2.3"; + pname = "xev"; + version = "1.2.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xev-1.2.3.tar.bz2"; @@ -1664,8 +1914,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xeyes = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, libXmu, xorgproto, libXrender, libXt }: stdenv.mkDerivation { - name = "xeyes-1.1.2"; + pname = "xeyes"; + version = "1.1.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xeyes-1.1.2.tar.bz2"; @@ -1677,8 +1929,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86inputevdev = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libevdev, udev, mtdev, xorgserver }: stdenv.mkDerivation { - name = "xf86-input-evdev-2.10.6"; + pname = "xf86-input-evdev"; + version = "2.10.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-input-evdev-2.10.6.tar.bz2"; @@ -1690,8 +1944,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86inputjoystick = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-input-joystick-1.6.3"; + pname = "xf86-input-joystick"; + version = "1.6.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-input-joystick-1.6.3.tar.bz2"; @@ -1703,8 +1959,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86inputkeyboard = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-input-keyboard-1.9.0"; + pname = "xf86-input-keyboard"; + version = "1.9.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-input-keyboard-1.9.0.tar.bz2"; @@ -1716,12 +1974,14 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86inputlibinput = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libinput, xorgserver }: stdenv.mkDerivation { - name = "xf86-input-libinput-1.0.1"; + pname = "xf86-input-libinput"; + version = "1.1.0"; builder = ./builder.sh; src = fetchurl { - url = "mirror://xorg/individual/driver/xf86-input-libinput-1.0.1.tar.bz2"; - sha256 = "0nr4r9x8c7y1l0ipivjch5zps093mxmg2nqmfn2934am26fc9ppx"; + url = "mirror://xorg/individual/driver/xf86-input-libinput-1.1.0.tar.bz2"; + sha256 = "05ldqr10f2rrnshyk3lc773rz0gp3ccdzwa8n7lsc94i850jl7g1"; }; hardeningDisable = [ "bindnow" "relro" ]; nativeBuildInputs = [ pkg-config ]; @@ -1729,8 +1989,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86inputmouse = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-input-mouse-1.9.3"; + pname = "xf86-input-mouse"; + version = "1.9.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-input-mouse-1.9.3.tar.bz2"; @@ -1742,8 +2004,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86inputsynaptics = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libevdev, libX11, libXi, xorgserver, libXtst }: stdenv.mkDerivation { - name = "xf86-input-synaptics-1.9.1"; + pname = "xf86-input-synaptics"; + version = "1.9.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-input-synaptics-1.9.1.tar.bz2"; @@ -1755,8 +2019,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86inputvmmouse = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, udev, xorgserver }: stdenv.mkDerivation { - name = "xf86-input-vmmouse-13.1.0"; + pname = "xf86-input-vmmouse"; + version = "13.1.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-input-vmmouse-13.1.0.tar.bz2"; @@ -1768,8 +2034,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86inputvoid = callPackage ({ stdenv, pkg-config, fetchurl, xorgserver, xorgproto }: stdenv.mkDerivation { - name = "xf86-input-void-1.4.1"; + pname = "xf86-input-void"; + version = "1.4.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-input-void-1.4.1.tar.bz2"; @@ -1781,8 +2049,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoamdgpu = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, mesa, libGL, libdrm, udev, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-amdgpu-19.1.0"; + pname = "xf86-video-amdgpu"; + version = "19.1.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-amdgpu-19.1.0.tar.bz2"; @@ -1794,8 +2064,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoapm = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-apm-1.3.0"; + pname = "xf86-video-apm"; + version = "1.3.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-apm-1.3.0.tar.bz2"; @@ -1807,8 +2079,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoark = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-ark-0.7.5"; + pname = "xf86-video-ark"; + version = "0.7.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-ark-0.7.5.tar.bz2"; @@ -1820,8 +2094,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoast = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-ast-1.1.5"; + pname = "xf86-video-ast"; + version = "1.1.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-ast-1.1.5.tar.bz2"; @@ -1833,8 +2109,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoati = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, mesa, libGL, libdrm, udev, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-ati-19.1.0"; + pname = "xf86-video-ati"; + version = "19.1.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-ati-19.1.0.tar.bz2"; @@ -1846,8 +2124,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videochips = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-chips-1.4.0"; + pname = "xf86-video-chips"; + version = "1.4.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-chips-1.4.0.tar.bz2"; @@ -1859,8 +2139,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videocirrus = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-cirrus-1.5.3"; + pname = "xf86-video-cirrus"; + version = "1.5.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-cirrus-1.5.3.tar.bz2"; @@ -1872,8 +2154,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videodummy = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-dummy-0.3.8"; + pname = "xf86-video-dummy"; + version = "0.3.8"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-dummy-0.3.8.tar.bz2"; @@ -1885,8 +2169,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videofbdev = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-fbdev-0.5.0"; + pname = "xf86-video-fbdev"; + version = "0.5.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-fbdev-0.5.0.tar.bz2"; @@ -1898,8 +2184,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videogeode = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-geode-2.11.19"; + pname = "xf86-video-geode"; + version = "2.11.19"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-geode-2.11.19.tar.bz2"; @@ -1911,8 +2199,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoglide = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-glide-1.2.2"; + pname = "xf86-video-glide"; + version = "1.2.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-glide-1.2.2.tar.bz2"; @@ -1924,8 +2214,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoglint = callPackage ({ stdenv, pkg-config, fetchurl, libpciaccess, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-glint-1.2.9"; + pname = "xf86-video-glint"; + version = "1.2.9"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-glint-1.2.9.tar.bz2"; @@ -1937,8 +2229,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoi128 = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-i128-1.4.0"; + pname = "xf86-video-i128"; + version = "1.4.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-i128-1.4.0.tar.bz2"; @@ -1950,8 +2244,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoi740 = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-i740-1.4.0"; + pname = "xf86-video-i740"; + version = "1.4.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-i740-1.4.0.tar.bz2"; @@ -1963,8 +2259,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videointel = callPackage ({ stdenv, pkg-config, fetchurl, cairo, xorgproto, libdrm, libpng, udev, libpciaccess, libX11, xcbutil, libxcb, libXcursor, libXdamage, libXext, libXfixes, xorgserver, libXrandr, libXrender, libxshmfence, libXtst, libXvMC }: stdenv.mkDerivation { - name = "xf86-video-intel-2.99.917"; + pname = "xf86-video-intel"; + version = "2.99.917"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-intel-2.99.917.tar.bz2"; @@ -1976,8 +2274,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videomach64 = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-mach64-6.9.6"; + pname = "xf86-video-mach64"; + version = "6.9.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-mach64-6.9.6.tar.bz2"; @@ -1989,8 +2289,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videomga = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-mga-2.0.0"; + pname = "xf86-video-mga"; + version = "2.0.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-mga-2.0.0.tar.bz2"; @@ -2002,8 +2304,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoneomagic = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-neomagic-1.3.0"; + pname = "xf86-video-neomagic"; + version = "1.3.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-neomagic-1.3.0.tar.bz2"; @@ -2015,8 +2319,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videonewport = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-newport-0.2.4"; + pname = "xf86-video-newport"; + version = "0.2.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-newport-0.2.4.tar.bz2"; @@ -2028,8 +2334,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videonouveau = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, udev, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-nouveau-1.0.17"; + pname = "xf86-video-nouveau"; + version = "1.0.17"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-nouveau-1.0.17.tar.bz2"; @@ -2041,8 +2349,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videonv = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-nv-2.1.21"; + pname = "xf86-video-nv"; + version = "2.1.21"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-nv-2.1.21.tar.bz2"; @@ -2054,8 +2364,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoomap = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-omap-0.4.5"; + pname = "xf86-video-omap"; + version = "0.4.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-omap-0.4.5.tar.bz2"; @@ -2067,8 +2379,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoopenchrome = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, udev, libpciaccess, libX11, libXext, xorgserver, libXvMC }: stdenv.mkDerivation { - name = "xf86-video-openchrome-0.6.0"; + pname = "xf86-video-openchrome"; + version = "0.6.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-openchrome-0.6.0.tar.bz2"; @@ -2080,8 +2394,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoqxl = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, udev, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-qxl-0.1.5"; + pname = "xf86-video-qxl"; + version = "0.1.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-qxl-0.1.5.tar.bz2"; @@ -2093,8 +2409,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videor128 = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-r128-6.11.0"; + pname = "xf86-video-r128"; + version = "6.11.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-r128-6.11.0.tar.bz2"; @@ -2106,8 +2424,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videorendition = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-rendition-4.2.7"; + pname = "xf86-video-rendition"; + version = "4.2.7"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-rendition-4.2.7.tar.bz2"; @@ -2119,8 +2439,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videos3virge = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-s3virge-1.11.0"; + pname = "xf86-video-s3virge"; + version = "1.11.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-s3virge-1.11.0.tar.bz2"; @@ -2132,8 +2454,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videosavage = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-savage-2.3.9"; + pname = "xf86-video-savage"; + version = "2.3.9"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-savage-2.3.9.tar.bz2"; @@ -2145,8 +2469,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videosiliconmotion = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-siliconmotion-1.7.9"; + pname = "xf86-video-siliconmotion"; + version = "1.7.9"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-siliconmotion-1.7.9.tar.bz2"; @@ -2158,8 +2484,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videosis = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-sis-0.11.0"; + pname = "xf86-video-sis"; + version = "0.11.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-sis-0.11.0.tar.bz2"; @@ -2171,8 +2499,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videosisusb = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-sisusb-0.9.7"; + pname = "xf86-video-sisusb"; + version = "0.9.7"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-sisusb-0.9.7.tar.bz2"; @@ -2184,8 +2514,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videosuncg6 = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-suncg6-1.1.2"; + pname = "xf86-video-suncg6"; + version = "1.1.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-suncg6-1.1.2.tar.bz2"; @@ -2197,8 +2529,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videosunffb = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-sunffb-1.2.2"; + pname = "xf86-video-sunffb"; + version = "1.2.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-sunffb-1.2.2.tar.bz2"; @@ -2210,8 +2544,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videosunleo = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-sunleo-1.2.2"; + pname = "xf86-video-sunleo"; + version = "1.2.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-sunleo-1.2.2.tar.bz2"; @@ -2223,8 +2559,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videotdfx = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-tdfx-1.5.0"; + pname = "xf86-video-tdfx"; + version = "1.5.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-tdfx-1.5.0.tar.bz2"; @@ -2236,8 +2574,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videotga = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-tga-1.2.2"; + pname = "xf86-video-tga"; + version = "1.2.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-tga-1.2.2.tar.bz2"; @@ -2249,8 +2589,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videotrident = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-trident-1.3.8"; + pname = "xf86-video-trident"; + version = "1.3.8"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-trident-1.3.8.tar.bz2"; @@ -2262,8 +2604,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videov4l = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-v4l-0.3.0"; + pname = "xf86-video-v4l"; + version = "0.3.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-v4l-0.3.0.tar.bz2"; @@ -2275,8 +2619,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videovboxvideo = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-vboxvideo-1.0.0"; + pname = "xf86-video-vboxvideo"; + version = "1.0.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-vboxvideo-1.0.0.tar.bz2"; @@ -2288,8 +2634,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videovesa = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-vesa-2.5.0"; + pname = "xf86-video-vesa"; + version = "2.5.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-vesa-2.5.0.tar.bz2"; @@ -2301,8 +2649,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videovmware = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, udev, libpciaccess, libX11, libXext, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-vmware-13.3.0"; + pname = "xf86-video-vmware"; + version = "13.3.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-vmware-13.3.0.tar.bz2"; @@ -2314,8 +2664,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videovoodoo = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-voodoo-1.2.5"; + pname = "xf86-video-voodoo"; + version = "1.2.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-voodoo-1.2.5.tar.bz2"; @@ -2327,8 +2679,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videowsfb = callPackage ({ stdenv, pkg-config, fetchurl, xorgserver, xorgproto }: stdenv.mkDerivation { - name = "xf86-video-wsfb-0.4.0"; + pname = "xf86-video-wsfb"; + version = "0.4.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-wsfb-0.4.0.tar.bz2"; @@ -2340,8 +2694,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xf86videoxgi = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libdrm, libpciaccess, xorgserver }: stdenv.mkDerivation { - name = "xf86-video-xgi-1.6.1"; + pname = "xf86-video-xgi"; + version = "1.6.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/driver/xf86-video-xgi-1.6.1.tar.bz2"; @@ -2353,8 +2709,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xfd = callPackage ({ stdenv, pkg-config, fetchurl, libxkbfile, fontconfig, libXaw, libXft, libXmu, xorgproto, libXrender, libXt, gettext }: stdenv.mkDerivation { - name = "xfd-1.1.3"; + pname = "xfd"; + version = "1.1.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xfd-1.1.3.tar.bz2"; @@ -2366,8 +2724,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xfontsel = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXaw, libXmu, libXt }: stdenv.mkDerivation { - name = "xfontsel-1.0.6"; + pname = "xfontsel"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xfontsel-1.0.6.tar.bz2"; @@ -2379,8 +2739,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xfs = callPackage ({ stdenv, pkg-config, fetchurl, libXfont2, xorgproto, xtrans }: stdenv.mkDerivation { - name = "xfs-1.2.0"; + pname = "xfs"; + version = "1.2.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xfs-1.2.0.tar.bz2"; @@ -2392,8 +2754,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xfsinfo = callPackage ({ stdenv, pkg-config, fetchurl, libFS, xorgproto }: stdenv.mkDerivation { - name = "xfsinfo-1.0.6"; + pname = "xfsinfo"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xfsinfo-1.0.6.tar.bz2"; @@ -2405,8 +2769,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xgamma = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto, libXxf86vm }: stdenv.mkDerivation { - name = "xgamma-1.0.6"; + pname = "xgamma"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xgamma-1.0.6.tar.bz2"; @@ -2418,8 +2784,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xgc = callPackage ({ stdenv, pkg-config, fetchurl, libXaw, libXt }: stdenv.mkDerivation { - name = "xgc-1.0.5"; + pname = "xgc"; + version = "1.0.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xgc-1.0.5.tar.bz2"; @@ -2431,8 +2799,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xhost = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXau, libXmu, xorgproto }: stdenv.mkDerivation { - name = "xhost-1.0.8"; + pname = "xhost"; + version = "1.0.8"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xhost-1.0.8.tar.bz2"; @@ -2444,8 +2814,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xinit = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto }: stdenv.mkDerivation { - name = "xinit-1.4.1"; + pname = "xinit"; + version = "1.4.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xinit-1.4.1.tar.bz2"; @@ -2457,8 +2829,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xinput = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXext, libXi, libXinerama, libXrandr }: stdenv.mkDerivation { - name = "xinput-1.6.3"; + pname = "xinput"; + version = "1.6.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xinput-1.6.3.tar.bz2"; @@ -2470,8 +2844,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xkbcomp = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libxkbfile, xorgproto }: stdenv.mkDerivation { - name = "xkbcomp-1.4.5"; + pname = "xkbcomp"; + version = "1.4.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xkbcomp-1.4.5.tar.bz2"; @@ -2483,8 +2859,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xkbevd = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libxkbfile }: stdenv.mkDerivation { - name = "xkbevd-1.1.4"; + pname = "xkbevd"; + version = "1.1.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xkbevd-1.1.4.tar.bz2"; @@ -2496,8 +2874,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xkbprint = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libxkbfile, xorgproto }: stdenv.mkDerivation { - name = "xkbprint-1.0.4"; + pname = "xkbprint"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xkbprint-1.0.4.tar.bz2"; @@ -2509,8 +2889,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xkbutils = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, libX11, libXaw, libXt }: stdenv.mkDerivation { - name = "xkbutils-1.0.4"; + pname = "xkbutils"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xkbutils-1.0.4.tar.bz2"; @@ -2522,12 +2904,14 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xkeyboardconfig = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto, python3 }: stdenv.mkDerivation { - name = "xkeyboard-config-2.31"; + pname = "xkeyboard-config"; + version = "2.33"; builder = ./builder.sh; src = fetchurl { - url = "mirror://xorg/individual/data/xkeyboard-config/xkeyboard-config-2.31.tar.bz2"; - sha256 = "18xddaxh83zm698syh50w983jg6b7b8zgv0dfaf7ha485hgihi6s"; + url = "mirror://xorg/individual/data/xkeyboard-config/xkeyboard-config-2.33.tar.bz2"; + sha256 = "1g6kn7l0mixw50kgn7d97gwv1990c5rczr2x776q3xywss8dfzv5"; }; hardeningDisable = [ "bindnow" "relro" ]; nativeBuildInputs = [ pkg-config python3 ]; @@ -2535,8 +2919,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xkill = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXmu, xorgproto }: stdenv.mkDerivation { - name = "xkill-1.0.5"; + pname = "xkill"; + version = "1.0.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xkill-1.0.5.tar.bz2"; @@ -2548,8 +2934,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xload = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXaw, libXmu, xorgproto, libXt, gettext }: stdenv.mkDerivation { - name = "xload-1.1.3"; + pname = "xload"; + version = "1.1.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xload-1.1.3.tar.bz2"; @@ -2561,8 +2949,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xlsatoms = callPackage ({ stdenv, pkg-config, fetchurl, libxcb }: stdenv.mkDerivation { - name = "xlsatoms-1.1.3"; + pname = "xlsatoms"; + version = "1.1.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xlsatoms-1.1.3.tar.bz2"; @@ -2574,8 +2964,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xlsclients = callPackage ({ stdenv, pkg-config, fetchurl, libxcb }: stdenv.mkDerivation { - name = "xlsclients-1.1.4"; + pname = "xlsclients"; + version = "1.1.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xlsclients-1.1.4.tar.bz2"; @@ -2587,8 +2979,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xlsfonts = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto }: stdenv.mkDerivation { - name = "xlsfonts-1.0.6"; + pname = "xlsfonts"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xlsfonts-1.0.6.tar.bz2"; @@ -2600,8 +2994,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xmag = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXaw, libXmu, libXt }: stdenv.mkDerivation { - name = "xmag-1.0.6"; + pname = "xmag"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xmag-1.0.6.tar.bz2"; @@ -2613,8 +3009,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xmessage = callPackage ({ stdenv, pkg-config, fetchurl, libXaw, libXt }: stdenv.mkDerivation { - name = "xmessage-1.0.5"; + pname = "xmessage"; + version = "1.0.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xmessage-1.0.5.tar.bz2"; @@ -2626,8 +3024,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xmodmap = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto }: stdenv.mkDerivation { - name = "xmodmap-1.0.10"; + pname = "xmodmap"; + version = "1.0.10"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xmodmap-1.0.10.tar.bz2"; @@ -2639,8 +3039,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xmore = callPackage ({ stdenv, pkg-config, fetchurl, libXaw, libXt }: stdenv.mkDerivation { - name = "xmore-1.0.3"; + pname = "xmore"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xmore-1.0.3.tar.bz2"; @@ -2652,8 +3054,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xorgcffiles = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "xorg-cf-files-1.0.6"; + pname = "xorg-cf-files"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/util/xorg-cf-files-1.0.6.tar.bz2"; @@ -2665,8 +3069,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xorgdocs = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "xorg-docs-1.7.1"; + pname = "xorg-docs"; + version = "1.7.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/doc/xorg-docs-1.7.1.tar.bz2"; @@ -2678,21 +3084,25 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; - xorgproto = callPackage ({ stdenv, pkg-config, fetchurl, libXt }: stdenv.mkDerivation { - name = "xorgproto-2021.3"; + # THIS IS A GENERATED FILE. DO NOT EDIT! + xorgproto = callPackage ({ stdenv, pkg-config, fetchurl, libXt, python3 }: stdenv.mkDerivation { + pname = "xorgproto"; + version = "2021.4"; builder = ./builder.sh; src = fetchurl { - url = "mirror://xorg/individual/proto/xorgproto-2021.3.tar.bz2"; - sha256 = "0dypp7cvjf0rvwa7cn1zp7djw5ynhs1rwk9p0r1vczbwzha2nwsc"; + url = "mirror://xorg/individual/proto/xorgproto-2021.4.tar.bz2"; + sha256 = "1gwz8lhvczjinndrq2jb0swfvhk7p65rprkwiqwlp132041mfl8g"; }; hardeningDisable = [ "bindnow" "relro" ]; - nativeBuildInputs = [ pkg-config ]; + nativeBuildInputs = [ pkg-config python3 ]; buildInputs = [ libXt ]; meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xorgserver = callPackage ({ stdenv, pkg-config, fetchurl, xorgproto, openssl, libX11, libXau, libXaw, libxcb, xcbutil, xcbutilwm, xcbutilimage, xcbutilkeysyms, xcbutilrenderutil, libXdmcp, libXfixes, libxkbfile, libXmu, libXpm, libXrender, libXres, libXt }: stdenv.mkDerivation { - name = "xorg-server-1.20.11"; + pname = "xorg-server"; + version = "1.20.11"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/xserver/xorg-server-1.20.11.tar.bz2"; @@ -2704,8 +3114,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xorgsgmldoctools = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "xorg-sgml-doctools-1.11"; + pname = "xorg-sgml-doctools"; + version = "1.11"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/doc/xorg-sgml-doctools-1.11.tar.bz2"; @@ -2717,8 +3129,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xpr = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXmu, xorgproto }: stdenv.mkDerivation { - name = "xpr-1.0.5"; + pname = "xpr"; + version = "1.0.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xpr-1.0.5.tar.bz2"; @@ -2730,8 +3144,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xprop = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto }: stdenv.mkDerivation { - name = "xprop-1.2.5"; + pname = "xprop"; + version = "1.2.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xprop-1.2.5.tar.bz2"; @@ -2743,8 +3159,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xrandr = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto, libXrandr, libXrender }: stdenv.mkDerivation { - name = "xrandr-1.5.1"; + pname = "xrandr"; + version = "1.5.1"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xrandr-1.5.1.tar.xz"; @@ -2756,8 +3174,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xrdb = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXmu, xorgproto }: stdenv.mkDerivation { - name = "xrdb-1.2.0"; + pname = "xrdb"; + version = "1.2.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xrdb-1.2.0.tar.bz2"; @@ -2769,8 +3189,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xrefresh = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto }: stdenv.mkDerivation { - name = "xrefresh-1.0.6"; + pname = "xrefresh"; + version = "1.0.6"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xrefresh-1.0.6.tar.bz2"; @@ -2782,8 +3204,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xset = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXext, libXmu, xorgproto, libXxf86misc }: stdenv.mkDerivation { - name = "xset-1.2.4"; + pname = "xset"; + version = "1.2.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xset-1.2.4.tar.bz2"; @@ -2795,8 +3219,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xsetroot = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xbitmaps, libXcursor, libXmu, xorgproto }: stdenv.mkDerivation { - name = "xsetroot-1.1.2"; + pname = "xsetroot"; + version = "1.1.2"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xsetroot-1.1.2.tar.bz2"; @@ -2808,8 +3234,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xsm = callPackage ({ stdenv, pkg-config, fetchurl, libICE, libSM, libX11, libXaw, libXt }: stdenv.mkDerivation { - name = "xsm-1.0.4"; + pname = "xsm"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xsm-1.0.4.tar.bz2"; @@ -2821,8 +3249,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xstdcmap = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXmu, xorgproto }: stdenv.mkDerivation { - name = "xstdcmap-1.0.4"; + pname = "xstdcmap"; + version = "1.0.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xstdcmap-1.0.4.tar.bz2"; @@ -2834,8 +3264,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xtrans = callPackage ({ stdenv, pkg-config, fetchurl }: stdenv.mkDerivation { - name = "xtrans-1.4.0"; + pname = "xtrans"; + version = "1.4.0"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/lib/xtrans-1.4.0.tar.bz2"; @@ -2847,8 +3279,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xtrap = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libXt, libXTrap }: stdenv.mkDerivation { - name = "xtrap-1.0.3"; + pname = "xtrap"; + version = "1.0.3"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xtrap-1.0.3.tar.bz2"; @@ -2860,8 +3294,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xvinfo = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto, libXv }: stdenv.mkDerivation { - name = "xvinfo-1.1.4"; + pname = "xvinfo"; + version = "1.1.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xvinfo-1.1.4.tar.bz2"; @@ -2873,8 +3309,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xwd = callPackage ({ stdenv, pkg-config, fetchurl, libxkbfile, libX11, xorgproto }: stdenv.mkDerivation { - name = "xwd-1.0.7"; + pname = "xwd"; + version = "1.0.7"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xwd-1.0.7.tar.bz2"; @@ -2886,8 +3324,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xwininfo = callPackage ({ stdenv, pkg-config, fetchurl, libX11, libxcb, xorgproto }: stdenv.mkDerivation { - name = "xwininfo-1.1.4"; + pname = "xwininfo"; + version = "1.1.4"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xwininfo-1.1.4.tar.bz2"; @@ -2899,8 +3339,10 @@ lib.makeScope newScope (self: with self; { meta.platforms = lib.platforms.unix; }) {}; + # THIS IS A GENERATED FILE. DO NOT EDIT! xwud = callPackage ({ stdenv, pkg-config, fetchurl, libX11, xorgproto }: stdenv.mkDerivation { - name = "xwud-1.0.5"; + pname = "xwud"; + version = "1.0.5"; builder = ./builder.sh; src = fetchurl { url = "mirror://xorg/individual/app/xwud-1.0.5.tar.bz2"; diff --git a/third_party/nixpkgs/pkgs/servers/x11/xorg/generate-expr-from-tarballs.pl b/third_party/nixpkgs/pkgs/servers/x11/xorg/generate-expr-from-tarballs.pl index b50f3f33a3..e18479c0d7 100755 --- a/third_party/nixpkgs/pkgs/servers/x11/xorg/generate-expr-from-tarballs.pl +++ b/third_party/nixpkgs/pkgs/servers/x11/xorg/generate-expr-from-tarballs.pl @@ -17,6 +17,7 @@ use File::Temp; my %pkgURLs; my %pkgHashes; my %pkgNames; +my %pkgVersions; my %pkgRequires; my %pkgNativeRequires; @@ -73,8 +74,12 @@ while (<>) { next; } + # split by first occurence of hyphen followd by only numbers ends line or another hyphen follows + my ($name, $version) = split(/-(?=[.0-9]+(?:$|-))/, $pkgName, 2); + $pkgURLs{$pkg} = $tarball; - $pkgNames{$pkg} = $pkgName; + $pkgNames{$pkg} = $name; + $pkgVersions{$pkg} = $version; my $cachePath = catdir($downloadCache, basename($tarball)); my $hash; @@ -301,8 +306,10 @@ foreach my $pkg (sort (keys %pkgURLs)) { } print OUT < $out/include/TargetConditionals.h + #ifndef __TARGETCONDITIONALS__ + #define __TARGETCONDITIONALS__ + #define TARGET_OS_MAC 1 + #define TARGET_OS_WIN32 0 + #define TARGET_OS_UNIX 0 + #define TARGET_OS_OSX 1 + #define TARGET_OS_IPHONE 0 + #define TARGET_OS_IOS 0 + #define TARGET_OS_WATCH 0 + #define TARGET_OS_BRIDGE 0 + #define TARGET_OS_TV 0 + #define TARGET_OS_SIMULATOR 0 + #define TARGET_OS_EMBEDDED 0 + #define TARGET_OS_EMBEDDED_OTHER 0 /* Used in configd */ + #define TARGET_IPHONE_SIMULATOR TARGET_OS_SIMULATOR /* deprecated */ + #define TARGET_OS_NANO TARGET_OS_WATCH /* deprecated */ + + #define TARGET_CPU_PPC 0 + #define TARGET_CPU_PPC64 0 + #define TARGET_CPU_68K 0 + #define TARGET_CPU_X86 0 + #define TARGET_CPU_X86_64 1 + #define TARGET_CPU_ARM 0 + #define TARGET_CPU_ARM64 0 + #define TARGET_CPU_MIPS 0 + #define TARGET_CPU_SPARC 0 + #define TARGET_CPU_ALPHA 0 + #define TARGET_RT_MAC_CFM 0 + #define TARGET_RT_MAC_MACHO 1 + #define TARGET_RT_LITTLE_ENDIAN 1 + #define TARGET_RT_BIG_ENDIAN 0 + #define TARGET_RT_64_BIT 1 + #endif /* __TARGETCONDITIONALS__ */ + EOF + ''; + }); + build = stdenv.mkDerivation { name = "stdenv-bootstrap-tools"; @@ -37,12 +87,12 @@ in rec { ${lib.optionalString stdenv.targetPlatform.isx86_64 '' # Copy libSystem's .o files for various low-level boot stuff. - cp -d ${darwin.Libsystem}/lib/*.o $out/lib + cp -d ${Libsystem_}/lib/*.o $out/lib # Resolv is actually a link to another package, so let's copy it properly - cp -L ${darwin.Libsystem}/lib/libresolv.9.dylib $out/lib + cp -L ${Libsystem_}/lib/libresolv.9.dylib $out/lib - cp -rL ${darwin.Libsystem}/include $out + cp -rL ${Libsystem_}/include $out chmod -R u+w $out/include cp -rL ${darwin.ICU}/include* $out/include cp -rL ${libiconv}/include/* $out/include @@ -204,6 +254,8 @@ in rec { ''; }; + bootstrapLlvmVersion = llvmPackages.llvm.version; + bootstrapFiles = { sh = "${build}/on-server/sh"; bzip2 = "${build}/on-server/bzip2"; @@ -358,7 +410,7 @@ in rec { system = if crossSystem != null then crossSystem else system; stdenvStages = args: let - args' = args // { inherit bootstrapFiles; }; + args' = args // { inherit bootstrapLlvmVersion bootstrapFiles; }; in (import (test-pkgspath + "/pkgs/stdenv/darwin") args').stagesDarwin; }; } diff --git a/third_party/nixpkgs/pkgs/stdenv/native/default.nix b/third_party/nixpkgs/pkgs/stdenv/native/default.nix index 010b4141e8..87862b84bc 100644 --- a/third_party/nixpkgs/pkgs/stdenv/native/default.nix +++ b/third_party/nixpkgs/pkgs/stdenv/native/default.nix @@ -132,7 +132,7 @@ in inherit lib nativePrefix; bintools = import ../../build-support/bintools-wrapper { name = "bintools"; - inherit stdenvNoCC nativePrefix; + inherit lib stdenvNoCC nativePrefix; nativeTools = true; nativeLibc = true; }; diff --git a/third_party/nixpkgs/pkgs/test/cc-wrapper/default.nix b/third_party/nixpkgs/pkgs/test/cc-wrapper/default.nix index d82ba296e2..b483372dea 100644 --- a/third_party/nixpkgs/pkgs/test/cc-wrapper/default.nix +++ b/third_party/nixpkgs/pkgs/test/cc-wrapper/default.nix @@ -35,8 +35,7 @@ in stdenv.mkDerivation { printf "checking whether compiler builds valid static C binaries... " >&2 $CC ${staticLibc} -static -o cc-static ${./cc-main.c} ./cc-static - # our glibc does not have pie enabled yet. - ${lib.optionalString (stdenv.hostPlatform.isMusl && stdenv.cc.isGNU) '' + ${lib.optionalString (stdenv.cc.isGNU && lib.versionAtLeast (lib.getVersion stdenv.cc.name) "8.0.0") '' printf "checking whether compiler builds valid static pie C binaries... " >&2 $CC ${staticLibc} -static-pie -o cc-static-pie ${./cc-main.c} ./cc-static-pie diff --git a/third_party/nixpkgs/pkgs/test/texlive/default.nix b/third_party/nixpkgs/pkgs/test/texlive/default.nix index d8420d9913..86c0a7f795 100644 --- a/third_party/nixpkgs/pkgs/test/texlive/default.nix +++ b/third_party/nixpkgs/pkgs/test/texlive/default.nix @@ -105,4 +105,18 @@ mkdir "$out" mv document*.svg "$out"/ ''; + + texdoc = runCommandNoCC "texlive-test-texdoc" { + nativeBuildInputs = [ + (with texlive; combine { + inherit scheme-infraonly luatex texdoc; + pkgFilter = pkg: lib.elem pkg.tlType [ "run" "bin" "doc" ]; + }) + ]; + } '' + texdoc --version + + texdoc --debug --list texdoc | tee "$out" + grep texdoc.pdf "$out" + ''; } diff --git a/third_party/nixpkgs/pkgs/test/vim/default.nix b/third_party/nixpkgs/pkgs/test/vim/default.nix index c809940fc4..cb3953a63f 100644 --- a/third_party/nixpkgs/pkgs/test/vim/default.nix +++ b/third_party/nixpkgs/pkgs/test/vim/default.nix @@ -1,50 +1,16 @@ -{ vimUtils, vim_configurable, writeText, neovim, vimPlugins -, lib, fetchFromGitHub, neovimUtils, wrapNeovimUnstable -, neovim-unwrapped +{ vimUtils, vim_configurable, writeText, vimPlugins +, lib, fetchFromGitHub +, pkgs }: let inherit (vimUtils) buildVimPluginFrom2Nix; packages.myVimPackage.start = with vimPlugins; [ vim-nix ]; - plugins = with vimPlugins; [ - { - plugin = vim-obsession; - config = '' - map $ Obsession - ''; - } - ]; - - nvimConfNix = neovimUtils.makeNeovimConfig { - inherit plugins; - customRC = '' - " just a comment - ''; - }; - - wrapNeovim = suffix: config: - wrapNeovimUnstable neovim-unwrapped (config // { - extraName = suffix; - wrapRc = true; - }); in -{ + pkgs.recurseIntoAttrs (rec { vim_empty_config = vimUtils.vimrcFile { beforePlugins = ""; customRC = ""; }; - ### neovim tests - ################## - nvim_with_plugins = wrapNeovim "-with-plugins" nvimConfNix; - - nvim_via_override = neovim.override { - configure = { - packages.foo.start = [ vimPlugins.ale ]; - customRC = '' - :help ale - ''; - }; - }; - ### vim tests ################## vim_with_vim2nix = vim_configurable.customize { @@ -72,11 +38,6 @@ in vimrcConfig.packages.myVimPackage.start = with vimPlugins; [ vim-nix ]; }; - # only neovim makes use of `requiredPlugins`, test this here - test_nvim_with_vim_nix_using_pathogen = neovim.override { - configure.pathogen.pluginNames = [ "vim-nix" ]; - }; - # regression test for https://github.com/NixOS/nixpkgs/issues/53112 # The user may have specified their own plugins which may not be formatted # exactly as the generated ones. In particular, they may not have the `pname` @@ -99,12 +60,4 @@ in }); vimrcConfig.vam.pluginDictionaries = [ { names = [ "vim-trailing-whitespace" ]; } ]; }; - - # system remote plugin manifest should be generated, deoplete should be usable - # without the user having to do `UpdateRemotePlugins`. To test, launch neovim - # and do `:call deoplete#enable()`. It will print an error if the remote - # plugin is not registered. - test_nvim_with_remote_plugin = neovim.override { - configure.pathogen.pluginNames = with vimPlugins; [ deoplete-nvim ]; - }; -} +}) diff --git a/third_party/nixpkgs/pkgs/tools/X11/opentabletdriver/default.nix b/third_party/nixpkgs/pkgs/tools/X11/opentabletdriver/default.nix index 5128e4d30c..2d1ce4a4e3 100644 --- a/third_party/nixpkgs/pkgs/tools/X11/opentabletdriver/default.nix +++ b/third_party/nixpkgs/pkgs/tools/X11/opentabletdriver/default.nix @@ -23,18 +23,18 @@ stdenv.mkDerivation rec { pname = "OpenTabletDriver"; - version = "0.5.3.1"; + version = "0.5.3.2"; src = fetchFromGitHub { owner = "InfinityGhost"; repo = "OpenTabletDriver"; rev = "v${version}"; - sha256 = "OT8/c+6wNpZyq/q7uMxIqmyJKNAq0B4ynEAqFF0GWyo="; + sha256 = "qRc/9Edp3x7/XVEWgBbPush76MSQz4biYSk+E9Gt68w="; }; debPkg = fetchurl { url = "https://github.com/InfinityGhost/OpenTabletDriver/releases/download/v${version}/OpenTabletDriver.deb"; - sha256 = "0nm0v1xhphl6g6rz3li4rbdp7408g6sf9l4nh3mbbif5042xa0qh"; + sha256 = "14k06iyc642x42yadyfmmf8ky84y8rc6kgd63b4ipskkcxyl1gvl"; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/tools/X11/opentabletdriver/deps.nix b/third_party/nixpkgs/pkgs/tools/X11/opentabletdriver/deps.nix index 041795596b..45ded85558 100644 --- a/third_party/nixpkgs/pkgs/tools/X11/opentabletdriver/deps.nix +++ b/third_party/nixpkgs/pkgs/tools/X11/opentabletdriver/deps.nix @@ -1,43 +1,48 @@ { fetchNuGet }: [ (fetchNuGet { name = "AtkSharp"; - version = "3.22.25.74"; - sha256 = "04zjpjrddw5clac0mjpk0q00rbmv45bh1bsqa4s3pc5pb7fm9cd9"; + version = "3.24.24.34"; + sha256 = "1jn1vgi9xm0jp7769k6sbdi8d273kigjrsh93i6s4c03hqxv7cqs"; }) (fetchNuGet { name = "CairoSharp"; - version = "3.22.25.74"; - sha256 = "0sx7vmwcrfbkg3g887v051iklcdmdhh43ndp96nk4bccjimmmwl6"; + version = "3.24.24.34"; + sha256 = "0pydn1k0cam1gclg9sc1sbnmbyzh28qlc5qanyxcylwghink3kgz"; }) (fetchNuGet { name = "Eto.Forms"; version = "2.5.10"; sha256 = "1d71wglk4ixfqfbm6sxmj753x5iwbar8i9zzjy3bh64fy1dn8lz7"; }) + (fetchNuGet { + name = "Eto.Forms"; + version = "2.5.11"; + sha256 = "0h86jc19wy3ssj7pb34w1h02v92mg29gdipszwjs3y15piy66z3s"; + }) (fetchNuGet { name = "Eto.Platform.Gtk"; - version = "2.5.10"; - sha256 = "1pkqvlfx7bzracnw19bl50i9jg4ym376vihmy9qq7m5z5nfdqn4g"; + version = "2.5.11"; + sha256 = "1s9njz7l9zghrbzli7lbiav5ss3glqf17npj07f3jldd933nb95j"; }) (fetchNuGet { name = "GdkSharp"; - version = "3.22.25.74"; - sha256 = "07sdfvqk2jmyjj7fyd0mikhnzsk52zd3g2dhip8kz3006cczqm81"; + version = "3.24.24.34"; + sha256 = "0r0x0yib7chwsyrbpvicrfwldwqx5lyqq4p86zaxpmzd6zdaj0x5"; }) (fetchNuGet { name = "GioSharp"; - version = "3.22.25.74"; - sha256 = "01l4216bm5jxbxypkkq4d2527c6zd68kbywr3h1lr1darc9nf1d1"; + version = "3.24.24.34"; + sha256 = "02hxvgjd4w9jpzbkk7qf9q9bkvyp5hfzwxfqp10vg5lpl9yl3xpx"; }) (fetchNuGet { name = "GLibSharp"; - version = "3.22.25.74"; - sha256 = "0k2p79z4wcswi528v0ykc37rsqfqi6xd6pl0j4csdj9zf19svgx2"; + version = "3.24.24.34"; + sha256 = "0kvp033fgdwc8p2abfp5z9pzq66cvwbnjfvr4v4bkpy5s5h181kq"; }) (fetchNuGet { name = "GtkSharp"; - version = "3.22.25.74"; - sha256 = "0vazfvkjyzppcynqa1h70s1jmp4vq2j30v5x2scg8n2c5dxaj0k3"; + version = "3.24.24.34"; + sha256 = "0028hzmmqyfx87qqmaf9cgb5psn7gkbmqvixcid67x1d6mzxjicb"; }) (fetchNuGet { name = "HidSharpCore"; @@ -126,8 +131,8 @@ }) (fetchNuGet { name = "PangoSharp"; - version = "3.22.25.74"; - sha256 = "172i1hjpz4rgqlilir8a57kgmciw9x0shz4zwbhhlr59mndvqbih"; + version = "3.24.24.34"; + sha256 = "1r0h14cklglfpv1lhv93cxmzi2w7d5s03gzpq3j5dmrz43flg9zw"; }) (fetchNuGet { name = "runtime.debian.8-x64.runtime.native.System.Security.Cryptography.OpenSsl"; diff --git a/third_party/nixpkgs/pkgs/tools/X11/xidlehook/default.nix b/third_party/nixpkgs/pkgs/tools/X11/xidlehook/default.nix index b7cb9c9d8b..ac5d6fc964 100644 --- a/third_party/nixpkgs/pkgs/tools/X11/xidlehook/default.nix +++ b/third_party/nixpkgs/pkgs/tools/X11/xidlehook/default.nix @@ -40,7 +40,7 @@ rustPlatform.buildRustPackage rec { description = "xautolock rewrite in Rust, with a few extra features"; homepage = "https://github.com/jD91mZM2/xidlehook"; license = licenses.mit; - maintainers = with maintainers; [ jD91mZM2 ]; + maintainers = with maintainers; [ ]; platforms = platforms.unix; badPlatforms = platforms.darwin; }; diff --git a/third_party/nixpkgs/pkgs/tools/admin/acme.sh/default.nix b/third_party/nixpkgs/pkgs/tools/admin/acme.sh/default.nix index a7e1d02cb3..83d4387bd3 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/acme.sh/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/acme.sh/default.nix @@ -1,23 +1,29 @@ -{ stdenv, lib, fetchFromGitHub, makeWrapper, curl, openssl, socat, iproute2, unixtools, dnsutils }: +{ stdenv, lib, fetchFromGitHub, makeWrapper, curl, openssl, socat, iproute2, + unixtools, dnsutils, coreutils, gnugrep, gnused }: stdenv.mkDerivation rec { pname = "acme.sh"; - version = "2.8.9"; + version = "2.9.0"; src = fetchFromGitHub { owner = "Neilpang"; repo = "acme.sh"; rev = version; - sha256 = "sha256-xiLAvxly4WbMb6DAXPsXJgQqVmTlX9cbqFECJQ+r0Jk="; + sha256 = "sha256-BSKqfj8idpE4OV8/EJkCFo5i1vq/aEde/moqJcwuDvk="; }; nativeBuildInputs = [ makeWrapper ]; installPhase = '' + runHook preInstall + mkdir -p $out $out/bin $out/libexec cp -R $src/* $_ makeWrapper $out/libexec/acme.sh $out/bin/acme.sh \ --prefix PATH : "${ lib.makeBinPath [ + coreutils + gnugrep + gnused socat openssl curl @@ -25,6 +31,8 @@ stdenv.mkDerivation rec { (if stdenv.isLinux then iproute2 else unixtools.netstat) ] }" + + runHook postInstall ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/tools/admin/analog/default.nix b/third_party/nixpkgs/pkgs/tools/admin/analog/default.nix index d85e5365d6..3d8556d810 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/analog/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/analog/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "analog"; - version = "6.0.16"; + version = "6.0.17"; src = fetchFromGitHub { owner = "c-amie"; repo = "analog-ce"; rev = version; - sha256 = "15hi8kfknldwpvm885r9s7zd5h7cirs7x0zazx2nnz62xvz3iymk"; + sha256 = "sha256-89nNkIUKzlcKKy0TfthA9T27A446Fqv9hYllGjYkDP4="; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/tools/admin/awscli/default.nix b/third_party/nixpkgs/pkgs/tools/admin/awscli/default.nix index c5b426e463..0d0d2ec80f 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/awscli/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/awscli/default.nix @@ -21,11 +21,11 @@ let in with py.pkgs; buildPythonApplication rec { pname = "awscli"; - version = "1.19.52"; # N.B: if you change this, change botocore and boto3 to a matching version too + version = "1.19.97"; # N.B: if you change this, change botocore and boto3 to a matching version too src = fetchPypi { inherit pname version; - sha256 = "sha256-keKyuNeDC/90pn89KjoDTO8AGsmI8nqfDNSeGyM6iHQ="; + sha256 = "sha256-kecuyQMk4GWH9G0/f4Gi/hWtW4Zme9Q4i7XclcZTlNc="; }; # https://github.com/aws/aws-cli/issues/4837 diff --git a/third_party/nixpkgs/pkgs/tools/admin/azure-cli/default.nix b/third_party/nixpkgs/pkgs/tools/admin/azure-cli/default.nix index c037f661e6..877ddf8a5e 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/azure-cli/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/azure-cli/default.nix @@ -1,7 +1,7 @@ { stdenv, lib, python3, fetchFromGitHub, installShellFiles }: let - version = "2.23.0"; + version = "2.24.2"; srcName = "azure-cli-${version}-src"; src = fetchFromGitHub { @@ -9,7 +9,7 @@ let owner = "Azure"; repo = "azure-cli"; rev = "azure-cli-${version}"; - sha256 = "sha256-uIM1U9hub1A1YT6CzwQHmefNBuU4tDapu7VC6EP5kuM="; + sha256 = "sha256-4XmwM0/89hacA8ARs5Zq/ahzeqIc9wS18zT/ale+wQ4="; }; # put packages that needs to be overriden in the py package scope @@ -28,6 +28,7 @@ py.pkgs.toPythonApplication (py.pkgs.buildAzureCliPackage { substituteInPlace setup.py \ --replace "javaproperties==0.5.1" "javaproperties" \ --replace "pytz==2019.1" "pytz" \ + --replace "jsondiff==1.2.0" "jsondiff~=1.2" \ --replace "antlr4-python3-runtime~=4.7.2" "antlr4-python3-runtime~=4.7" \ --replace "mock~=4.0" "mock" @@ -132,6 +133,7 @@ py.pkgs.toPythonApplication (py.pkgs.buildAzureCliPackage { mock paramiko pydocumentdb + PyGithub pygments pyopenssl pytz @@ -144,7 +146,7 @@ py.pkgs.toPythonApplication (py.pkgs.buildAzureCliPackage { sshtunnel urllib3 vsts-cd-manager - websocket_client + websocket-client xmltodict javaproperties jsondiff diff --git a/third_party/nixpkgs/pkgs/tools/admin/azure-cli/python-packages.nix b/third_party/nixpkgs/pkgs/tools/admin/azure-cli/python-packages.nix index 421aa3da4a..228fb4503c 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/azure-cli/python-packages.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/azure-cli/python-packages.nix @@ -153,8 +153,8 @@ let azure-mgmt-recoveryservicesbackup = overrideAzureMgmtPackage super.azure-mgmt-recoveryservicesbackup "0.11.0" "zip" "f2b85d1d7d7db2af106000910ea5f8b95639874176a5de2f7ab37a2caa67af6b"; - azure-mgmt-resource = overrideAzureMgmtPackage super.azure-mgmt-resource "12.1.0" "zip" - "sha256-XPnO6OiwjTbfxz9Q3JkuCPnfTtmdU2cqP14w9ZVIcBE="; + azure-mgmt-resource = overrideAzureMgmtPackage super.azure-mgmt-resource "18.0.0" "zip" + "551036e592f409ef477d30937ea7cc4dda5126576965d9c816fdb8401bbd774c"; azure-mgmt-appconfiguration = overrideAzureMgmtPackage super.azure-mgmt-appconfiguration "1.0.1" "zip" "b58bbe82a7429ba589292024896b58d96fe9fa732c578569cac349928dc2ca5f"; @@ -171,14 +171,14 @@ let azure-mgmt-containerinstance = overrideAzureMgmtPackage super.azure-mgmt-containerinstance "1.4.0" "zip" "1qw6228bia5pimcijr755npli2l33jyfka1s2bzgl1w4h3prsji7"; - azure-mgmt-containerservice = overrideAzureMgmtPackage super.azure-mgmt-containerservice "11.1.0" "zip" - "sha256-7d9UlMudNd4hMcaNxJ+slL/tFyaI6BmBR6DlI3Blzq4="; + azure-mgmt-containerservice = overrideAzureMgmtPackage super.azure-mgmt-containerservice "11.2.0" "zip" + "sha256-x2YJt+fX0B+YMn7+yYi4t21K518DQQ3kBHn1nCrDSqo="; azure-mgmt-core = overrideAzureMgmtPackage super.azure-mgmt-core "1.2.0" "zip" "8fe3b59446438f27e34f7b24ea692a982034d9e734617ca1320eedeee1939998"; - azure-mgmt-cosmosdb = overrideAzureMgmtPackage super.azure-mgmt-cosmosdb "6.2.0" "zip" - "116b5bf9433ad89078c743b617c5b1c51f9ce1a1f128fb2e4bbafb5efb2d2c74"; + azure-mgmt-cosmosdb = overrideAzureMgmtPackage super.azure-mgmt-cosmosdb "6.3.0" "zip" + "4135104da5b0f3f0a7249abcd8da55936603e50aaaf2868e5f739a717cf20b3d"; azure-mgmt-databoxedge = overrideAzureMgmtPackage super.azure-mgmt-databoxedge "0.2.0" "zip" "sha256-g8BtUpIGOse8Jrws48gQ/o7sgymlgX0XIxl1ThHS3XA="; @@ -192,8 +192,8 @@ let azure-mgmt-imagebuilder = overrideAzureMgmtPackage super.azure-mgmt-imagebuilder "0.4.0" "zip" "0cqpjnkpid6a34ifd4vk4fn1h57pa1bg3r756wv082xl2szr34jc"; - azure-mgmt-iothub = overrideAzureMgmtPackage super.azure-mgmt-iothub "0.12.0" "zip" - "187z0w5by7d9a2zsz3kidmzjw591akpc6dwhps4jyb4skcmyw86s"; + azure-mgmt-iothub = overrideAzureMgmtPackage super.azure-mgmt-iothub "2.0.0" "zip" + "653a765f0beb6af0c9ecbd290b4101e1b5e0f6450405faf28ab8234c15d8b38b"; azure-mgmt-iotcentral = overrideAzureMgmtPackage super.azure-mgmt-iotcentral "4.1.0" "zip" "e6d4810f454c0d63a5e816eaa7e54a073a3f70b2256162ff1c234cfe91783ae6"; @@ -213,8 +213,8 @@ let azure-mgmt-loganalytics = overrideAzureMgmtPackage super.azure-mgmt-loganalytics "8.0.0" "zip" "3e7a93186594c328a6f34f0e0d9209a05021228baa85aa4c1c4ffdbf8005a45f"; - azure-mgmt-network = overrideAzureMgmtPackage super.azure-mgmt-network "18.0.0" "zip" - "85fdeb7a1a8d89be9b585396796b218b31b681590d57d82d3ea14cf1f2d20b4a"; + azure-mgmt-network = overrideAzureMgmtPackage super.azure-mgmt-network "19.0.0" "zip" + "5e39a26ae81fa58c13c02029700f8c7b22c3fd832a294c543e3156a91b9459e8"; azure-mgmt-maps = overrideAzureMgmtPackage super.azure-mgmt-maps "0.1.0" "zip" "sha256-wSDiELthdo2ineJNKLgvjUKuJOUjlutlabSZcJ4i8AY="; @@ -222,6 +222,9 @@ let azure-mgmt-managedservices = overrideAzureMgmtPackage super.azure-mgmt-managedservices "1.0.0" "zip" "sha256-/tg5n8Z3Oq2jfB0ElqRvWUENd8lJTQyllnxTHDN2rRk="; + azure-mgmt-managementgroups = overrideAzureMgmtPackage super.azure-mgmt-managementgroups "0.1.0" "zip" + "sha256-/2LZgu3aY0o2Fgyx0Vo2epVypay0GeXnrTcejIO9R8c="; + azure-mgmt-marketplaceordering = overrideAzureMgmtPackage super.azure-mgmt-marketplaceordering "1.1.0" "zip" "68b381f52a4df4435dacad5a97e1c59ac4c981f667dcca8f9d04453417d60ad8"; @@ -231,8 +234,8 @@ let azure-mgmt-msi = overrideAzureMgmtPackage super.azure-mgmt-msi "0.2.0" "zip" "0rvik03njz940x2hvqg6iiq8k0d88gyygsr86w8s0sa12sdbq8l6"; - azure-mgmt-privatedns = overrideAzureMgmtPackage super.azure-mgmt-privatedns "0.1.0" "zip" - "sha256-0pz9jOyAbgZnPZOC0/V2b8Zdmp3nW0JHBQlKNKfbjSM="; + azure-mgmt-privatedns = overrideAzureMgmtPackage super.azure-mgmt-privatedns "1.0.0" "zip" + "b60f16e43f7b291582c5f57bae1b083096d8303e9d9958e2c29227a55cc27c45"; azure-mgmt-web = overrideAzureMgmtPackage super.azure-mgmt-web "2.0.0" "zip" "0040e1c9c795f7bebe43647ff30b62cb0db7175175df5cbfa1e554a6a277b81e"; @@ -294,11 +297,11 @@ let azure-mgmt-authorization = overrideAzureMgmtPackage super.azure-mgmt-authorization "0.61.0" "zip" "0xfvx2dvfj3fbz4ngn860ipi4v6gxqajyjc8x92r8knhmniyxk7m"; - azure-mgmt-storage = overrideAzureMgmtPackage super.azure-mgmt-storage "17.1.0" "zip" - "01acb8e988c8082174fa952e1638d700146185644fbe4b126e65843e63d44600"; + azure-mgmt-storage = overrideAzureMgmtPackage super.azure-mgmt-storage "18.0.0" "zip" + "d17beb34273797fa89863632ff0e1eb9b6a55198abb8c7f05d84980762e5f71f"; - azure-mgmt-servicebus = overrideAzureMgmtPackage super.azure-mgmt-servicebus "0.6.0" "zip" - "1c88pj8diijciizw4c6g1g6liz54cp3xmlm4xnmz97hizfw202gj"; + azure-mgmt-servicebus = overrideAzureMgmtPackage super.azure-mgmt-servicebus "6.0.0" "zip" + "f6c64ed97d22d0c03c4ca5fc7594bd0f3d4147659c10110160009b93f541298e"; azure-mgmt-servicefabric = overrideAzureMgmtPackage super.azure-mgmt-servicefabric "0.5.0" "zip" "0x6wxb9zrvcayg3yw0nm99p10vvgc0x3zwk9amzs5m682r2z4wap"; @@ -463,13 +466,25 @@ let doCheck = false; }); - knack = super.knack.overridePythonAttrs(oldAttrs: rec { - version = "0.8.1"; + PyGithub = super.PyGithub.overridePythonAttrs(oldAttrs: rec { + version = "1.38"; src = super.fetchPypi { inherit (oldAttrs) pname; inherit version; - sha256 = "sha256-5h2a5OJxmaLXTCYfgen4L1NTpdHC4a0lYAp9UQkXTuA="; + sha256 = "sha256-HtCPd17FBnvIRStyveLbuVz05S/yvVDMMsackf+tknI="; + }; + + doCheck = false; + }); + + knack = super.knack.overridePythonAttrs(oldAttrs: rec { + version = "0.8.2"; + + src = super.fetchPypi { + inherit (oldAttrs) pname; + inherit version; + sha256 = "sha256-TqpQocXnnRxcjl4XBbZhchsLg6CJaV5Z4inMJsZJY7k="; }; }); @@ -484,11 +499,10 @@ let }; }); - websocket_client = super.websocket_client.overridePythonAttrs(oldAttrs: rec { + websocket-client = super.websocket-client.overridePythonAttrs(oldAttrs: rec { version = "0.56.0"; - src = super.fetchPypi { - inherit (oldAttrs) pname; + src = oldAttrs.src.override { inherit version; sha256 = "0fpxjyr74klnyis3yf6m54askl0h5dchxcwbfjsq92xng0455m8z"; }; diff --git a/third_party/nixpkgs/pkgs/tools/admin/chamber/default.nix b/third_party/nixpkgs/pkgs/tools/admin/chamber/default.nix index 8396540cd2..4a26603a13 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/chamber/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/chamber/default.nix @@ -2,18 +2,18 @@ buildGoModule rec { pname = "chamber"; - version = "2.10.0"; + version = "2.10.1"; src = fetchFromGitHub { owner = "segmentio"; repo = pname; rev = "v${version}"; - sha256 = "4G/QGoztpcLIspHxD5G+obG5h05SZek4keOJ5qS3/zg="; + sha256 = "sha256-nIIoU+iz2uOglNaqGIhQ2kUjpFOyOx+flXXwu02UG6Y="; }; CGO_ENABLED = 0; - vendorSha256 = "XpLLolxWu9aMp1cyG4dUQk4YtknbIRMmBUdSeyY4PNk="; + vendorSha256 = "sha256-XpLLolxWu9aMp1cyG4dUQk4YtknbIRMmBUdSeyY4PNk="; buildFlagsArray = [ "-ldflags=-s -w -X main.Version=v${version}" ]; diff --git a/third_party/nixpkgs/pkgs/tools/admin/eksctl/default.nix b/third_party/nixpkgs/pkgs/tools/admin/eksctl/default.nix index d3ebba0ab4..32049fd11b 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/eksctl/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/eksctl/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "eksctl"; - version = "0.52.0"; + version = "0.54.0"; src = fetchFromGitHub { owner = "weaveworks"; repo = pname; rev = version; - sha256 = "sha256-P8v8XliY8XbfdiqSUTUhI4HYBKzAk/LHVSF0OLS8Vag="; + sha256 = "sha256-hWrSjkEdhb0F5lwFGwjkR2G6gQ8T8HommH2lxJE+0bk="; }; - vendorSha256 = "sha256-4aZVQjcrZ6NKXr0ZFMWEcf6jMtp6TlRlinZ6ZZvLDyE="; + vendorSha256 = "sha256-499c3Y9IUV8lc+O9qcEeFKQDT4QDvOPmu0rmps7M47w="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/tools/admin/exoscale-cli/default.nix b/third_party/nixpkgs/pkgs/tools/admin/exoscale-cli/default.nix index c2671646cb..d6b264a4aa 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/exoscale-cli/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/exoscale-cli/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { pname = "exoscale-cli"; - version = "1.31.0"; + version = "1.32.2"; src = fetchFromGitHub { owner = "exoscale"; repo = "cli"; rev = "v${version}"; - sha256 = "sha256-2CK/W8h0xfReqYt4a3qQ88Ydr8u9Ky6DfttJJaGu9kM="; + sha256 = "sha256-Yx+GA959AB6m62hDlZKYjsuT9Y9TJbIdzUVBMM8OgTg="; }; goPackagePath = "github.com/exoscale/cli"; diff --git a/third_party/nixpkgs/pkgs/tools/admin/fioctl/default.nix b/third_party/nixpkgs/pkgs/tools/admin/fioctl/default.nix index 0e0c977acd..068d87a3bf 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/fioctl/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/fioctl/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "fioctl"; - version = "0.17"; + version = "0.18"; src = fetchFromGitHub { owner = "foundriesio"; repo = "fioctl"; rev = "v${version}"; - sha256 = "sha256-u23BQ/sRAfUO36uqv7xY+DkseDnlVesgamsgne8N8kU="; + sha256 = "sha256-uqJ08ftaU39gmhDtl+noVtGscu6utcl42rXz4XaGtWc="; }; vendorSha256 = "sha256-6a+JMj3hh6GPuqnLknv7/uR8vsUsOgsS+pdxHoMqH5w="; diff --git a/third_party/nixpkgs/pkgs/tools/admin/google-cloud-sdk/default.nix b/third_party/nixpkgs/pkgs/tools/admin/google-cloud-sdk/default.nix index b9567fcfca..d5e8897af9 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/google-cloud-sdk/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/google-cloud-sdk/default.nix @@ -21,18 +21,18 @@ let sources = name: system: { x86_64-darwin = { url = "${baseUrl}/${name}-darwin-x86_64.tar.gz"; - sha256 = "1f86pkjsp8lrmk8ap40wh9zbzb2ni49vc2cjsdjbj4pkkwivihpv"; + sha256 = "1p8iv2axb5i8xnzm58dmmahxfwplj4r115mz63cl5q0iyy12npbh"; }; x86_64-linux = { url = "${baseUrl}/${name}-linux-x86_64.tar.gz"; - sha256 = "1l47lq2wq8y0adrjij3w5ki1mm1f00503ks398flfmbzyav6bad3"; + sha256 = "0zcf9zabdg2r7d9vafxn4wf0j09im5lhycylf91g734zzh6vc267"; }; }.${system}; in stdenv.mkDerivation rec { pname = "google-cloud-sdk"; - version = "343.0.0"; + version = "345.0.0"; src = fetchurl (sources "${pname}-${version}" stdenv.hostPlatform.system); diff --git a/third_party/nixpkgs/pkgs/tools/admin/lego/default.nix b/third_party/nixpkgs/pkgs/tools/admin/lego/default.nix index 4553242d66..78f4b8cd2c 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/lego/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/lego/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "lego"; - version = "4.3.1"; + version = "4.4.0"; src = fetchFromGitHub { owner = "go-acme"; repo = pname; rev = "v${version}"; - sha256 = "0mmr7fcqgbmr0b1fc49p6wjn7axxayyj420fxhhdvkd4nv8fxh1q"; + sha256 = "sha256-+5uy6zVfC+utXfwBCEo597CRo4di73ff0eqHyDUxxII="; }; - vendorSha256 = "04d141kjzqcjiwv6sd0sbrgsr7a99dvblm19gwzczljkfgi60q8w"; + vendorSha256 = "sha256-JgGDP5H7zKQ8sk36JtM/FCWXl7oTScHNboQ/mE5AisU="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/tools/admin/lxd/default.nix b/third_party/nixpkgs/pkgs/tools/admin/lxd/default.nix index 11c2da247d..fde3e829cc 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/lxd/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/lxd/default.nix @@ -19,13 +19,13 @@ let in buildGoPackage rec { pname = "lxd"; - version = "4.14"; + version = "4.15"; goPackagePath = "github.com/lxc/lxd"; src = fetchurl { url = "https://linuxcontainers.org/downloads/lxd/lxd-${version}.tar.gz"; - sha256 = "1x9gv70j333w254jgg1n0kvxpwv6vww0v0i862pglq48xhdaa7hy"; + sha256 = "sha256-UXipGNWclBKgr0r0wav85Gnhp2SXkTvDFr9gKJWismU="; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/tools/admin/pulumi/data.nix b/third_party/nixpkgs/pkgs/tools/admin/pulumi/data.nix index 2955be2d79..e1a6d14914 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/pulumi/data.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/pulumi/data.nix @@ -1,24 +1,24 @@ # DO NOT EDIT! This file is generated automatically by update.sh { }: { - version = "3.3.1"; + version = "3.5.1"; pulumiPkgs = { x86_64-linux = [ { - url = "https://get.pulumi.com/releases/sdk/pulumi-v3.3.1-linux-x64.tar.gz"; - sha256 = "1mqvx5g1pfc5fi4xmdp8fva1pzfxqm062mzl972fc3yrzfl7792f"; + url = "https://get.pulumi.com/releases/sdk/pulumi-v3.5.1-linux-x64.tar.gz"; + sha256 = "1wdkwifn1p0m98dmn0g2kcwnllqilfwzkyyg2sg1pfdmk3da9bi3"; } { url = "https://api.pulumi.com/releases/plugins/pulumi-resource-auth0-v2.2.0-linux-amd64.tar.gz"; sha256 = "0d88xfi7zzmpyrnvakwxsyavdx6d5hmfrcf4jhmd53mni0m0551l"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-aws-v4.6.0-linux-amd64.tar.gz"; - sha256 = "0i2bwxx49nqca3kykxbjfbbmgyr3qdlw3q4wp384ai5r9psk4iac"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-aws-v4.8.0-linux-amd64.tar.gz"; + sha256 = "14r2akgfrs512h9g6lx9scl0bph3qmw3j113shwg2nhqbmwvvh3z"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-cloudflare-v3.1.0-linux-amd64.tar.gz"; - sha256 = "0s8z4h0m3ipkxrbw6h8i8ciam3cgmacw3rvc63qydy5gqv9x6h6w"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-cloudflare-v3.2.0-linux-amd64.tar.gz"; + sha256 = "1xvbkvhny8h5yl6gvlgzdp0cd8xv39sxm36bfszvx9133p6spvy4"; } { url = "https://api.pulumi.com/releases/plugins/pulumi-resource-consul-v3.2.0-linux-amd64.tar.gz"; @@ -29,8 +29,8 @@ sha256 = "1ppwha1zk73w39msp6jym9in7jsrxzc530qgj4lj0961mb9rdkra"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-digitalocean-v4.3.1-linux-amd64.tar.gz"; - sha256 = "1r9cgwb0d332hrx33i40vphimhwcnqw5gkzbin7rmxlmasrkgwwy"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-digitalocean-v4.4.1-linux-amd64.tar.gz"; + sha256 = "1zng8w2jr76z9s95id9dnvw7skr4yd55xrvv9c053gpyh7wv7bhs"; } { url = "https://api.pulumi.com/releases/plugins/pulumi-resource-docker-v3.0.0-linux-amd64.tar.gz"; @@ -41,24 +41,24 @@ sha256 = "0yhdcjscdkvvai95z2v6xabvvsfvaqi38ngpqrb73ahlwqhz3nys"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-gcp-v5.6.0-linux-amd64.tar.gz"; - sha256 = "1pagydam6xypb1gbk710v3qid2bn77df9lzqfxk5l2pbbs65cvyp"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-gcp-v5.9.0-linux-amd64.tar.gz"; + sha256 = "0w28ikwna057dbhsvidkd5sp2v0frih6n4an1cl3gx51yhqsxzap"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-github-v4.1.0-linux-amd64.tar.gz"; - sha256 = "08kxd1x8kx2zdwylhprkb6hs02z3b4jmjphail1s395gzq1271bc"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-github-v4.2.0-linux-amd64.tar.gz"; + sha256 = "159lk4iv9zi2ggcjwjsg9an4rfjc0lbyn8d3kbv10p6cx109ljzg"; } { url = "https://api.pulumi.com/releases/plugins/pulumi-resource-gitlab-v4.1.0-linux-amd64.tar.gz"; sha256 = "13rchk54wpjwci26kfa519gqagwfrp31w6a9nk1xfdxj45ha9d3x"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-hcloud-v1.0.0-linux-amd64.tar.gz"; - sha256 = "0lqnb1xrb5ma8ssvn63lh92ihja6zx4nrx40pici1ggaln4sphn0"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-hcloud-v1.0.1-linux-amd64.tar.gz"; + sha256 = "1jk3al4mnk6cblaf56yyx0anv3kp3vyr6fqglsinkzaayaswx63z"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-kubernetes-v3.3.0-linux-amd64.tar.gz"; - sha256 = "0l1pr8yfq901wr8ngan1hrwhb4lvcxa92sg38gqixzma0x6xhgwb"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-kubernetes-v3.4.0-linux-amd64.tar.gz"; + sha256 = "1dpd6m5w6fnxrspig4s2vcd4hxy720gcrdrxakn1mvz29k4s0zv3"; } { url = "https://api.pulumi.com/releases/plugins/pulumi-resource-linode-v3.1.0-linux-amd64.tar.gz"; @@ -93,26 +93,26 @@ sha256 = "0npszs37q6j1x5h2sp9j1c6qnhr03lxp2r2ci0d4z3x7vyk06rja"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-vsphere-v3.1.0-linux-amd64.tar.gz"; - sha256 = "0xvkkqgfgmw3f2nbmfvn1kwc9088awaw52kx1kxnp217g5r3c0fx"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-vsphere-v4.0.0-linux-amd64.tar.gz"; + sha256 = "09vf4jddy7bys6x2vw7cyq5ylnwb43rr3ysk3vvi5czpbb8fa86k"; } ]; x86_64-darwin = [ { - url = "https://get.pulumi.com/releases/sdk/pulumi-v3.3.1-darwin-x64.tar.gz"; - sha256 = "0ri2wq45qm8fabdfsyr1vipnf6ybshxhqr3zrjs8qq1pyf92m5ks"; + url = "https://get.pulumi.com/releases/sdk/pulumi-v3.5.1-darwin-x64.tar.gz"; + sha256 = "0q2617vg53ib65vlj09z78lqqg4dz5ymcjn9kablkm5a6s1sfh5s"; } { url = "https://api.pulumi.com/releases/plugins/pulumi-resource-auth0-v2.2.0-darwin-amd64.tar.gz"; sha256 = "12mkr0xczdnp21k0k7qn4r3swkaq3pr6v2z853p1db7ksz5kds23"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-aws-v4.6.0-darwin-amd64.tar.gz"; - sha256 = "1rnb9q8w88jhp9mm3g31dnd4dis3j52pl97cd0yqg046f6jm048q"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-aws-v4.8.0-darwin-amd64.tar.gz"; + sha256 = "0qhpzvfv67fn2n1x3h7znqiw7wxz526iw1a41q8v8jalkahfa2rb"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-cloudflare-v3.1.0-darwin-amd64.tar.gz"; - sha256 = "1qjz33npwc7wdq3vrvfxhd4g1pwgl3p7cz5fkwyqs4zp24dcx1ga"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-cloudflare-v3.2.0-darwin-amd64.tar.gz"; + sha256 = "1h726ahb6mqzg83fl3m8wck5gz5hxczbpwmb5xl0yzz1m0s54czf"; } { url = "https://api.pulumi.com/releases/plugins/pulumi-resource-consul-v3.2.0-darwin-amd64.tar.gz"; @@ -123,8 +123,8 @@ sha256 = "1wwldhy6r6985rwx9vv73jb1nsna387sk6mba81lyc55ar67nsp9"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-digitalocean-v4.3.1-darwin-amd64.tar.gz"; - sha256 = "18qisw7m1kih27vl2099rzw44h8qyr2f3dnxby03z95f1nwyz1f1"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-digitalocean-v4.4.1-darwin-amd64.tar.gz"; + sha256 = "14kjmzmi5v5brz1cphpgr5k8clkr25vrc7wi8v36qmdhigv0kfbn"; } { url = "https://api.pulumi.com/releases/plugins/pulumi-resource-docker-v3.0.0-darwin-amd64.tar.gz"; @@ -135,24 +135,24 @@ sha256 = "1dpsbq3b0fz86355jy7rz4kcsa1lnw4azn25vzlis89ay1ncbblc"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-gcp-v5.6.0-darwin-amd64.tar.gz"; - sha256 = "07fdrg3wd3wlsvh37gbxli0xcxd2c7g61ynrxzi0q8dg7687gjpq"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-gcp-v5.9.0-darwin-amd64.tar.gz"; + sha256 = "1y4pjx260dlh7yi0skd5n2ixlqzi6b9lp5h77qaq1b9h3n4xybfh"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-github-v4.1.0-darwin-amd64.tar.gz"; - sha256 = "107b6nlcc99lfysh5v3wz4vz751cdz12k0lm8jh39ikmdck5fphs"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-github-v4.2.0-darwin-amd64.tar.gz"; + sha256 = "1iwx80r9kmlrf961zck3qz2jb9shpmywdm5nkflvz6mhwrfsbz72"; } { url = "https://api.pulumi.com/releases/plugins/pulumi-resource-gitlab-v4.1.0-darwin-amd64.tar.gz"; sha256 = "0qbw4b5zm6dmwdilaz4bjdg55gc5lilwagrxwrab37vq4a8and4c"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-hcloud-v1.0.0-darwin-amd64.tar.gz"; - sha256 = "1lkrx2cayhhv432dvzvz8q4i1gfi659rkl59c0y0dkwbs8x425zb"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-hcloud-v1.0.1-darwin-amd64.tar.gz"; + sha256 = "1ddkzwwr2vc0sp1q3r510rpjqj5dl1dn8ax938874jnflcbcwng6"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-kubernetes-v3.3.0-darwin-amd64.tar.gz"; - sha256 = "0ic8cnrv8z1qwnlqk3dc3xrczx4ncxwdsdh1shk655hcsfdrcldq"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-kubernetes-v3.4.0-darwin-amd64.tar.gz"; + sha256 = "1x6fqa643n731cadb02288kc2z321gjjldkvi8wvjjy2dm0lfp72"; } { url = "https://api.pulumi.com/releases/plugins/pulumi-resource-linode-v3.1.0-darwin-amd64.tar.gz"; @@ -187,8 +187,8 @@ sha256 = "0nasbip85f1xjp6dfibw0nh133gf9cy5n4gdqnv5759bg92am7kg"; } { - url = "https://api.pulumi.com/releases/plugins/pulumi-resource-vsphere-v3.1.0-darwin-amd64.tar.gz"; - sha256 = "0r3zmd4q9nhwbn52vva62m5j9nsrxbfgljrvfyyh19i2hm7l0kcl"; + url = "https://api.pulumi.com/releases/plugins/pulumi-resource-vsphere-v4.0.0-darwin-amd64.tar.gz"; + sha256 = "09m0p5k8gkz37193vj1kwkdwbcvv04cwangwbp5xcn3c20q467xb"; } ]; }; diff --git a/third_party/nixpkgs/pkgs/tools/admin/pulumi/update.sh b/third_party/nixpkgs/pkgs/tools/admin/pulumi/update.sh index ed4fbd79ed..98f382d12d 100755 --- a/third_party/nixpkgs/pkgs/tools/admin/pulumi/update.sh +++ b/third_party/nixpkgs/pkgs/tools/admin/pulumi/update.sh @@ -3,24 +3,24 @@ # Version of Pulumi from # https://www.pulumi.com/docs/get-started/install/versions/ -VERSION="3.3.1" +VERSION="3.5.1" # Grab latest release ${VERSION} from # https://github.com/pulumi/pulumi-${NAME}/releases plugins=( "auth0=2.2.0" - "aws=4.6.0" - "cloudflare=3.1.0" + "aws=4.8.0" + "cloudflare=3.2.0" "consul=3.2.0" "datadog=3.3.0" - "digitalocean=4.3.1" + "digitalocean=4.4.1" "docker=3.0.0" "equinix-metal=2.0.0" - "gcp=5.6.0" - "github=4.1.0" + "gcp=5.9.0" + "github=4.2.0" "gitlab=4.1.0" - "hcloud=1.0.0" - "kubernetes=3.3.0" + "hcloud=1.0.1" + "kubernetes=3.4.0" "linode=3.1.0" "mailgun=3.1.0" "mysql=3.0.0" @@ -29,7 +29,7 @@ plugins=( "postgresql=3.1.0" "random=4.2.0" "vault=4.1.0" - "vsphere=3.1.0" + "vsphere=4.0.0" ) function genMainSrc() { diff --git a/third_party/nixpkgs/pkgs/tools/admin/salt/default.nix b/third_party/nixpkgs/pkgs/tools/admin/salt/default.nix index 38ece95e3a..0620bb2853 100644 --- a/third_party/nixpkgs/pkgs/tools/admin/salt/default.nix +++ b/third_party/nixpkgs/pkgs/tools/admin/salt/default.nix @@ -7,11 +7,11 @@ }: python3.pkgs.buildPythonApplication rec { pname = "salt"; - version = "3003"; + version = "3003.1"; src = python3.pkgs.fetchPypi { inherit pname version; - sha256 = "xGiXM9/nOM8ofjHLP908uNFgYpUgKxjY5m1I03LVync="; + sha256 = "inGE095NFydhjw0/u6eeVDia7/hbcvTOuCALzBZ/br4="; }; propagatedBuildInputs = with python3.pkgs; [ @@ -31,6 +31,8 @@ python3.pkgs.buildPythonApplication rec { postPatch = '' substituteInPlace "salt/utils/rsax931.py" \ --subst-var-by "libcrypto" "${openssl.out}/lib/libcrypto.so" + substituteInPlace requirements/base.txt \ + --replace contextvars "" ''; # The tests fail due to socket path length limits at the very least; diff --git a/third_party/nixpkgs/pkgs/tools/audio/abcmidi/default.nix b/third_party/nixpkgs/pkgs/tools/audio/abcmidi/default.nix index 519a6ffabc..6038d1586e 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/abcmidi/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/abcmidi/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "abcMIDI"; - version = "2021.05.25"; + version = "2021.06.24"; src = fetchzip { url = "https://ifdo.ca/~seymour/runabc/${pname}-${version}.zip"; - sha256 = "sha256-lgKrDR+2KRl6vvZJp2nmY493agQx+FoQ+/SNNV4lA/A="; + sha256 = "sha256-FaB1QTl4xCTz/sbgptXQHtD0wadXG3UCgdZoOPCOH0U="; }; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/tools/audio/alsaequal/default.nix b/third_party/nixpkgs/pkgs/tools/audio/alsaequal/default.nix index 12d590c4c7..c6c25fd399 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/alsaequal/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/alsaequal/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl -, alsaLib, caps +, alsa-lib, caps }: stdenv.mkDerivation rec { @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { sha256 = "1w3g9q5z3nrn3mwdhaq6zsg0jila8d102dgwgrhj9vfx58apsvli"; }; - buildInputs = [ alsaLib ]; + buildInputs = [ alsa-lib ]; makeFlags = [ "DESTDIR=$(out)" ]; diff --git a/third_party/nixpkgs/pkgs/tools/audio/darkice/default.nix b/third_party/nixpkgs/pkgs/tools/audio/darkice/default.nix index f7d74dc615..1ff66e83e5 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/darkice/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/darkice/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, pkg-config -, libjack2, alsaLib, libpulseaudio +, libjack2, alsa-lib, libpulseaudio , faac, lame, libogg, libopus, libvorbis, libsamplerate }: @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; buildInputs = [ - libopus libvorbis libogg libpulseaudio alsaLib libsamplerate libjack2 lame + libopus libvorbis libogg libpulseaudio alsa-lib libsamplerate libjack2 lame ]; NIX_CFLAGS_COMPILE = "-fpermissive"; diff --git a/third_party/nixpkgs/pkgs/tools/audio/gvolicon/default.nix b/third_party/nixpkgs/pkgs/tools/audio/gvolicon/default.nix index 03ea3302d2..9ef8eb4377 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/gvolicon/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/gvolicon/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, makeWrapper, alsaLib, pkg-config, fetchgit, gtk3, gnome, gdk-pixbuf, librsvg, wrapGAppsHook }: +{ lib, stdenv, makeWrapper, alsa-lib, pkg-config, fetchgit, gtk3, gnome, gdk-pixbuf, librsvg, wrapGAppsHook }: stdenv.mkDerivation { name = "gvolicon-2014-04-28"; @@ -10,7 +10,7 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkg-config ]; buildInputs = [ - makeWrapper alsaLib gtk3 gdk-pixbuf gnome.adwaita-icon-theme + makeWrapper alsa-lib gtk3 gdk-pixbuf gnome.adwaita-icon-theme librsvg wrapGAppsHook ]; diff --git a/third_party/nixpkgs/pkgs/tools/audio/liquidsoap/full.nix b/third_party/nixpkgs/pkgs/tools/audio/liquidsoap/full.nix index 3d05461121..1c52e6796b 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/liquidsoap/full.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/liquidsoap/full.nix @@ -1,6 +1,6 @@ { lib, stdenv, makeWrapper, fetchurl, which, pkg-config , ocamlPackages -, libao, portaudio, alsaLib, libpulseaudio, libjack2 +, libao, portaudio, alsa-lib, libpulseaudio, libjack2 , libsamplerate, libmad, taglib, lame, libogg , libvorbis, speex, libtheora, libopus, zlib , faad2, flac, ladspaH, ffmpeg, frei0r, dssi @@ -52,7 +52,7 @@ stdenv.mkDerivation { nativeBuildInputs = [ makeWrapper pkg-config ]; buildInputs = [ which ocamlPackages.ocaml ocamlPackages.findlib - libao portaudio alsaLib libpulseaudio libjack2 + libao portaudio alsa-lib libpulseaudio libjack2 libsamplerate libmad taglib lame libogg libvorbis speex libtheora libopus zlib faad2 flac ladspaH ffmpeg frei0r dssi diff --git a/third_party/nixpkgs/pkgs/tools/audio/mididings/default.nix b/third_party/nixpkgs/pkgs/tools/audio/mididings/default.nix index 186f67f350..f220fed208 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/mididings/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/mididings/default.nix @@ -1,4 +1,4 @@ -{ lib, pythonPackages, fetchFromGitHub, pkg-config, glib, alsaLib, libjack2 }: +{ lib, pythonPackages, fetchFromGitHub, pkg-config, glib, alsa-lib, libjack2 }: pythonPackages.buildPythonApplication { version = "2015-11-17"; @@ -12,7 +12,7 @@ pythonPackages.buildPythonApplication { }; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ glib alsaLib libjack2 pythonPackages.boost ]; + buildInputs = [ glib alsa-lib libjack2 pythonPackages.boost ]; propagatedBuildInputs = with pythonPackages; [ decorator ] # for livedings ++ [ tkinter pyliblo ] diff --git a/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/0001-opl3bankeditor-Look-for-system-installed-Rt-libs.patch b/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/0001-opl3bankeditor-Look-for-system-installed-Rt-libs.patch new file mode 100644 index 0000000000..36adff53a0 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/0001-opl3bankeditor-Look-for-system-installed-Rt-libs.patch @@ -0,0 +1,200 @@ +From 11711398a1ec16f4eaeac8523b77165a560b69cc Mon Sep 17 00:00:00 2001 +From: OPNA2608 +Date: Sun, 13 Jun 2021 13:55:53 +0200 +Subject: [PATCH] Look for system-installed Rt libs + +--- + CMakeLists.txt | 159 +++++++++++++++++++++++++++++++------------------ + 1 file changed, 102 insertions(+), 57 deletions(-) + +diff --git a/CMakeLists.txt b/CMakeLists.txt +index f3e53c3..027c1b1 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -50,15 +50,6 @@ message("!! Optional feature summary:") + message("!! RtMidi: ${USE_RTMIDI}") + message("!! RtAudio: ${USE_RTAUDIO}") + +-if(USE_RTAUDIO) +- if(CMAKE_SYSTEM_NAME STREQUAL "Linux") +- pkg_check_modules(JACK "jack") +- message("!! -- Jack driver: ${JACK_FOUND}") +- pkg_check_modules(PULSEAUDIO "libpulse-simple") +- message("!! -- Pulseaudio driver: ${PULSEAUDIO_FOUND}") +- endif() +-endif() +- + if(ENABLE_PLOTS) + message("!! Qwt: ${QWT_LIBRARY}") + endif() +@@ -250,65 +241,119 @@ elseif(CMAKE_SYSTEM_NAME STREQUAL "Darwin") + endif() + + if(USE_RTMIDI) +- add_library(RtMidi STATIC "src/midi/external/rtmidi/RtMidi.cpp") +- target_include_directories(RtMidi PUBLIC "src/midi/external/rtmidi") +- if(CMAKE_SYSTEM_NAME STREQUAL "Linux") +- target_compile_definitions(RtMidi PUBLIC "__LINUX_ALSA__") +- target_link_libraries(RtMidi PUBLIC "asound") +- elseif(CMAKE_SYSTEM_NAME STREQUAL "Windows") +- target_compile_definitions(RtMidi PUBLIC "__WINDOWS_MM__") +- target_link_libraries(RtMidi PUBLIC "winmm") +- elseif(CMAKE_SYSTEM_NAME STREQUAL "Darwin") +- target_compile_definitions(RtMidi PUBLIC "__MACOSX_CORE__") +- find_library(COREMIDI_LIBRARY "CoreMIDI") +- target_link_libraries(RtMidi PUBLIC "${COREMIDI_LIBRARY}") ++ if(PKG_CONFIG_FOUND) ++ pkg_check_modules(RTMIDI rtmidi) ++ if(RTMIDI_FOUND) ++ message("Using system-installed RtMidi found by pkg-config.") ++ target_link_libraries(OPL3BankEditor PUBLIC ${RTMIDI_LDFLAGS}) ++ target_include_directories(OPL3BankEditor PUBLIC ${RTMIDI_INCLUDE_DIRS}) ++ target_compile_options(OPL3BankEditor PUBLIC ${RTMIDI_CFLAGS}) ++ endif() + endif() ++ ++ if(NOT RTMIDI_FOUND) ++ find_library(RTMIDI_LIBRARY "rtmidi") ++ find_path(RTMIDI_INCLUDE_DIRS "RtMidi.h") ++ message("RtMidi library: ${RTMIDI_LIBRARY}") ++ message("RtMidi header directory: ${RTMIDI_INCLUDE_DIRS}") ++ if(NOT RTMIDI_LIBRARY-NOTFOUND AND NOT RTMIDI_INCLUDE_DIRS STREQUAL RTMIDI_INCLUDE_DIRS-NOTFOUND) ++ message("Using system-installed RtMidi.") ++ set(RTMIDI_FOUND TRUE) ++ target_link_libraries(OPL3BankEditor PUBLIC ${RTMIDI_LIBRARY}) ++ target_include_directories(OPL3BankEditor PUBLIC ${RTMIDI_INCLUDE_DIRS}) ++ endif() ++ endif() ++ ++ if(NOT RTMIDI_FOUND) ++ message("Using bundled RtMidi.") ++ add_library(RtMidi STATIC "src/midi/external/rtmidi/RtMidi.cpp") ++ target_include_directories(RtMidi PUBLIC "src/midi/external/rtmidi") ++ if(CMAKE_SYSTEM_NAME STREQUAL "Linux") ++ target_compile_definitions(RtMidi PUBLIC "__LINUX_ALSA__") ++ target_link_libraries(RtMidi PUBLIC "asound") ++ elseif(CMAKE_SYSTEM_NAME STREQUAL "Windows") ++ target_compile_definitions(RtMidi PUBLIC "__WINDOWS_MM__") ++ target_link_libraries(RtMidi PUBLIC "winmm") ++ elseif(CMAKE_SYSTEM_NAME STREQUAL "Darwin") ++ target_compile_definitions(RtMidi PUBLIC "__MACOSX_CORE__") ++ find_library(COREMIDI_LIBRARY "CoreMIDI") ++ target_link_libraries(RtMidi PUBLIC "${COREMIDI_LIBRARY}") ++ endif() ++ target_link_libraries(OPL3BankEditor PRIVATE RtMidi) ++ endif() ++ + target_sources(OPL3BankEditor PRIVATE "src/midi/midi_rtmidi.cpp") + target_compile_definitions(OPL3BankEditor PRIVATE "ENABLE_MIDI") +- target_link_libraries(OPL3BankEditor PRIVATE RtMidi) + endif() + + if(USE_RTAUDIO) +- add_library(RtAudio STATIC "src/audio/external/rtaudio/RtAudio.cpp") +- target_include_directories(RtAudio PUBLIC "src/audio/external/rtaudio") +- if(CMAKE_SYSTEM_NAME STREQUAL "Linux") +- target_compile_definitions(RtAudio PUBLIC "__LINUX_ALSA__") +- target_link_libraries(RtAudio PUBLIC "asound") +- if(JACK_FOUND) +- target_compile_definitions(RtAudio PUBLIC "__UNIX_JACK__") +- target_include_directories(RtAudio PUBLIC ${JACK_INCLUDE_DIRS}) +- link_directories(${JACK_LIBRARY_DIRS}) +- target_link_libraries(RtAudio PUBLIC ${JACK_LIBRARIES}) ++ if(PKG_CONFIG_FOUND) ++ pkg_check_modules(RTAUDIO rtaudio) ++ if(RTAUDIO_FOUND) ++ message("Using system-installed RtAudio found by pkg-config.") ++ target_link_libraries(OPL3BankEditor PUBLIC ${RTAUDIO_LDFLAGS}) ++ target_include_directories(OPL3BankEditor PUBLIC ${RTAUDIO_INCLUDE_DIRS}) ++ target_compile_options(OPL3BankEditor PUBLIC ${RTAUDIO_CFLAGS}) ++ endif() ++ endif() ++ ++ if(NOT RTAUDIO_FOUND) ++ find_library(RTAUDIO_LIBRARY "rtaudio") ++ find_path(RTAUDIO_INCLUDE_DIRS "RtAudio.h") ++ message("RtAudio library: ${RTAUDIO_LIBRARY}") ++ message("RtAudio header directory: ${RTAUDIO_INCLUDE_DIRS}") ++ if(NOT RTAUDIO_LIBRARY-NOTFOUND AND NOT RTAUDIO_INCLUDE_DIRS STREQUAL RTAUDIO_INCLUDE_DIRS-NOTFOUND) ++ message("Using system-installed RtAudio.") ++ set(RTAUDIO_FOUND TRUE) ++ target_link_libraries(OPL3BankEditor PUBLIC ${RTAUDIO_LIBRARY}) ++ target_include_directories(OPL3BankEditor PUBLIC ${RTAUDIO_INCLUDE_DIRS}) + endif() +- if(PULSEAUDIO_FOUND) +- target_compile_definitions(RtAudio PUBLIC "__LINUX_PULSE__") +- target_include_directories(RtAudio PUBLIC ${PULSEAUDIO_INCLUDE_DIRS}) +- link_directories(${PULSEAUDIO_LIBRARY_DIRS}) +- target_link_libraries(RtAudio PUBLIC ${PULSEAUDIO_LIBRARIES}) ++ endif() ++ ++ if(NOT RTAUDIO_FOUND) ++ message("Using bundled RtAudio.") ++ add_library(RtAudio STATIC "src/audio/external/rtaudio/RtAudio.cpp") ++ target_include_directories(RtAudio PUBLIC "src/audio/external/rtaudio") ++ if(CMAKE_SYSTEM_NAME STREQUAL "Linux") ++ target_compile_definitions(RtAudio PUBLIC "__LINUX_ALSA__") ++ target_link_libraries(RtAudio PUBLIC "asound") ++ if(JACK_FOUND) ++ target_compile_definitions(RtAudio PUBLIC "__UNIX_JACK__") ++ target_include_directories(RtAudio PUBLIC ${JACK_INCLUDE_DIRS}) ++ link_directories(${JACK_LIBRARY_DIRS}) ++ target_link_libraries(RtAudio PUBLIC ${JACK_LIBRARIES}) ++ endif() ++ if(PULSEAUDIO_FOUND) ++ target_compile_definitions(RtAudio PUBLIC "__LINUX_PULSE__") ++ target_include_directories(RtAudio PUBLIC ${PULSEAUDIO_INCLUDE_DIRS}) ++ link_directories(${PULSEAUDIO_LIBRARY_DIRS}) ++ target_link_libraries(RtAudio PUBLIC ${PULSEAUDIO_LIBRARIES}) ++ endif() ++ elseif(CMAKE_SYSTEM_NAME STREQUAL "Windows") ++ target_compile_definitions(RtAudio PUBLIC "__WINDOWS_DS__") ++ target_link_libraries(RtAudio PUBLIC "dsound" "ole32") ++ target_compile_definitions(RtAudio PUBLIC "__WINDOWS_WASAPI__") ++ target_link_libraries(RtAudio PUBLIC "ksguid") ++ target_compile_definitions(RtAudio PUBLIC "__WINDOWS_ASIO__") ++ target_include_directories(RtAudio PRIVATE ++ "src/audio/external/rtaudio/include") ++ target_sources(RtAudio PRIVATE ++ "src/audio/external/rtaudio/include/asio.cpp" ++ "src/audio/external/rtaudio/include/asiodrivers.cpp" ++ "src/audio/external/rtaudio/include/asiolist.cpp" ++ "src/audio/external/rtaudio/include/iasiothiscallresolver.cpp") ++ elseif(CMAKE_SYSTEM_NAME STREQUAL "Darwin") ++ target_compile_definitions(RtAudio PUBLIC "__MACOSX_CORE__") ++ find_library(COREAUDIO_LIBRARY "CoreAudio") ++ target_link_libraries(RtAudio PUBLIC "${COREAUDIO_LIBRARY}") ++ find_library(COREFOUNDATION_LIBRARY "CoreFoundation") ++ target_link_libraries(RtAudio PUBLIC "${COREFOUNDATION_LIBRARY}") + endif() +- elseif(CMAKE_SYSTEM_NAME STREQUAL "Windows") +- target_compile_definitions(RtAudio PUBLIC "__WINDOWS_DS__") +- target_link_libraries(RtAudio PUBLIC "dsound" "ole32") +- target_compile_definitions(RtAudio PUBLIC "__WINDOWS_WASAPI__") +- target_link_libraries(RtAudio PUBLIC "ksguid") +- target_compile_definitions(RtAudio PUBLIC "__WINDOWS_ASIO__") +- target_include_directories(RtAudio PRIVATE +- "src/audio/external/rtaudio/include") +- target_sources(RtAudio PRIVATE +- "src/audio/external/rtaudio/include/asio.cpp" +- "src/audio/external/rtaudio/include/asiodrivers.cpp" +- "src/audio/external/rtaudio/include/asiolist.cpp" +- "src/audio/external/rtaudio/include/iasiothiscallresolver.cpp") +- elseif(CMAKE_SYSTEM_NAME STREQUAL "Darwin") +- target_compile_definitions(RtAudio PUBLIC "__MACOSX_CORE__") +- find_library(COREAUDIO_LIBRARY "CoreAudio") +- target_link_libraries(RtAudio PUBLIC "${COREAUDIO_LIBRARY}") +- find_library(COREFOUNDATION_LIBRARY "CoreFoundation") +- target_link_libraries(RtAudio PUBLIC "${COREFOUNDATION_LIBRARY}") ++ target_link_libraries(OPL3BankEditor PRIVATE RtAudio) + endif() ++ + target_sources(OPL3BankEditor PRIVATE "src/audio/ao_rtaudio.cpp") + target_compile_definitions(OPL3BankEditor PRIVATE "ENABLE_AUDIO_TESTING") +- target_link_libraries(OPL3BankEditor PRIVATE RtAudio) + endif() + + add_executable(measurer_tool +-- +2.29.3 + diff --git a/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/0001-opn2bankeditor-Look-for-system-installed-Rt-libs.patch b/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/0001-opn2bankeditor-Look-for-system-installed-Rt-libs.patch new file mode 100644 index 0000000000..f62c3236b3 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/0001-opn2bankeditor-Look-for-system-installed-Rt-libs.patch @@ -0,0 +1,200 @@ +From 69c993dacc7dc0cb9d105c3dfa764cd7be5c343e Mon Sep 17 00:00:00 2001 +From: OPNA2608 +Date: Sun, 13 Jun 2021 14:21:17 +0200 +Subject: [PATCH] Look for system-installed Rt libs + +--- + CMakeLists.txt | 159 +++++++++++++++++++++++++++++++------------------ + 1 file changed, 102 insertions(+), 57 deletions(-) + +diff --git a/CMakeLists.txt b/CMakeLists.txt +index f428dc4..18ba8c3 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -41,15 +41,6 @@ message("!! Optional feature summary:") + message("!! RtMidi: ${USE_RTMIDI}") + message("!! RtAudio: ${USE_RTAUDIO}") + +-if(USE_RTAUDIO) +- if(CMAKE_SYSTEM_NAME STREQUAL "Linux") +- pkg_check_modules(JACK "jack") +- message("!! -- Jack driver: ${JACK_FOUND}") +- pkg_check_modules(PULSEAUDIO "libpulse-simple") +- message("!! -- Pulseaudio driver: ${PULSEAUDIO_FOUND}") +- endif() +-endif() +- + if(ENABLE_PLOTS) + message("!! Qwt: ${QWT_LIBRARY}") + endif() +@@ -198,65 +189,119 @@ elseif(CMAKE_SYSTEM_NAME STREQUAL "Darwin") + endif() + + if(USE_RTMIDI) +- add_library(RtMidi STATIC "src/midi/external/rtmidi/RtMidi.cpp") +- target_include_directories(RtMidi PUBLIC "src/midi/external/rtmidi") +- if(CMAKE_SYSTEM_NAME STREQUAL "Linux") +- target_compile_definitions(RtMidi PUBLIC "__LINUX_ALSA__") +- target_link_libraries(RtMidi PUBLIC "asound") +- elseif(CMAKE_SYSTEM_NAME STREQUAL "Windows") +- target_compile_definitions(RtMidi PUBLIC "__WINDOWS_MM__") +- target_link_libraries(RtMidi PUBLIC "winmm") +- elseif(CMAKE_SYSTEM_NAME STREQUAL "Darwin") +- target_compile_definitions(RtMidi PUBLIC "__MACOSX_CORE__") +- find_library(COREMIDI_LIBRARY "CoreMIDI") +- target_link_libraries(RtMidi PUBLIC "${COREMIDI_LIBRARY}") ++ if(PKG_CONFIG_FOUND) ++ pkg_check_modules(RTMIDI rtmidi) ++ if(RTMIDI_FOUND) ++ message("Using system-installed RtMidi found by pkg-config.") ++ target_link_libraries(OPN2BankEditor PUBLIC ${RTMIDI_LDFLAGS}) ++ target_include_directories(OPN2BankEditor PUBLIC ${RTMIDI_INCLUDE_DIRS}) ++ target_compile_options(OPN2BankEditor PUBLIC ${RTMIDI_CFLAGS}) ++ endif() ++ endif() ++ ++ if(NOT RTMIDI_FOUND) ++ find_library(RTMIDI_LIBRARY "rtmidi") ++ find_path(RTMIDI_INCLUDE_DIRS "RtMidi.h") ++ message("RtMidi library: ${RTMIDI_LIBRARY}") ++ message("RtMidi header directory: ${RTMIDI_INCLUDE_DIRS}") ++ if(NOT RTMIDI_LIBRARY-NOTFOUND AND NOT RTMIDI_INCLUDE_DIRS STREQUAL RTMIDI_INCLUDE_DIRS-NOTFOUND) ++ message("Using system-installed RtMidi.") ++ set(RTMIDI_FOUND TRUE) ++ target_link_libraries(OPN2BankEditor PUBLIC ${RTMIDI_LIBRARY}) ++ target_include_directories(OPN2BankEditor PUBLIC ${RTMIDI_INCLUDE_DIRS}) ++ endif() ++ endif() ++ ++ if(NOT RTMIDI_FOUND) ++ message("Using bundled RtMidi.") ++ add_library(RtMidi STATIC "src/midi/external/rtmidi/RtMidi.cpp") ++ target_include_directories(RtMidi PUBLIC "src/midi/external/rtmidi") ++ if(CMAKE_SYSTEM_NAME STREQUAL "Linux") ++ target_compile_definitions(RtMidi PUBLIC "__LINUX_ALSA__") ++ target_link_libraries(RtMidi PUBLIC "asound") ++ elseif(CMAKE_SYSTEM_NAME STREQUAL "Windows") ++ target_compile_definitions(RtMidi PUBLIC "__WINDOWS_MM__") ++ target_link_libraries(RtMidi PUBLIC "winmm") ++ elseif(CMAKE_SYSTEM_NAME STREQUAL "Darwin") ++ target_compile_definitions(RtMidi PUBLIC "__MACOSX_CORE__") ++ find_library(COREMIDI_LIBRARY "CoreMIDI") ++ target_link_libraries(RtMidi PUBLIC "${COREMIDI_LIBRARY}") ++ endif() ++ target_link_libraries(OPN2BankEditor PRIVATE RtMidi) + endif() ++ + target_sources(OPN2BankEditor PRIVATE "src/midi/midi_rtmidi.cpp") + target_compile_definitions(OPN2BankEditor PRIVATE "ENABLE_MIDI") +- target_link_libraries(OPN2BankEditor PRIVATE RtMidi) + endif() + + if(USE_RTAUDIO) +- add_library(RtAudio STATIC "src/audio/external/rtaudio/RtAudio.cpp") +- target_include_directories(RtAudio PUBLIC "src/audio/external/rtaudio") +- if(CMAKE_SYSTEM_NAME STREQUAL "Linux") +- target_compile_definitions(RtAudio PUBLIC "__LINUX_ALSA__") +- target_link_libraries(RtAudio PUBLIC "asound") +- if(JACK_FOUND) +- target_compile_definitions(RtAudio PUBLIC "__UNIX_JACK__") +- target_include_directories(RtAudio PUBLIC ${JACK_INCLUDE_DIRS}) +- link_directories(${JACK_LIBRARY_DIRS}) +- target_link_libraries(RtAudio PUBLIC ${JACK_LIBRARIES}) ++ if(PKG_CONFIG_FOUND) ++ pkg_check_modules(RTAUDIO rtaudio) ++ if(RTAUDIO_FOUND) ++ message("Using system-installed RtAudio found by pkg-config.") ++ target_link_libraries(OPN2BankEditor PUBLIC ${RTAUDIO_LDFLAGS}) ++ target_include_directories(OPN2BankEditor PUBLIC ${RTAUDIO_INCLUDE_DIRS}) ++ target_compile_options(OPN2BankEditor PUBLIC ${RTAUDIO_CFLAGS}) + endif() +- if(PULSEAUDIO_FOUND) +- target_compile_definitions(RtAudio PUBLIC "__LINUX_PULSE__") +- target_include_directories(RtAudio PUBLIC ${PULSEAUDIO_INCLUDE_DIRS}) +- link_directories(${PULSEAUDIO_LIBRARY_DIRS}) +- target_link_libraries(RtAudio PUBLIC ${PULSEAUDIO_LIBRARIES}) ++ endif() ++ ++ if(NOT RTAUDIO_FOUND) ++ find_library(RTAUDIO_LIBRARY "rtaudio") ++ find_path(RTAUDIO_INCLUDE_DIRS "RtAudio.h") ++ message("RtAudio library: ${RTAUDIO_LIBRARY}") ++ message("RtAudio header directory: ${RTAUDIO_INCLUDE_DIRS}") ++ if(NOT RTAUDIO_LIBRARY-NOTFOUND AND NOT RTAUDIO_INCLUDE_DIRS STREQUAL RTAUDIO_INCLUDE_DIRS-NOTFOUND) ++ message("Using system-installed RtAudio.") ++ set(RTAUDIO_FOUND TRUE) ++ target_link_libraries(OPN2BankEditor PUBLIC ${RTAUDIO_LIBRARY}) ++ target_include_directories(OPN2BankEditor PUBLIC ${RTAUDIO_INCLUDE_DIRS}) + endif() +- elseif(CMAKE_SYSTEM_NAME STREQUAL "Windows") +- target_compile_definitions(RtAudio PUBLIC "__WINDOWS_DS__") +- target_link_libraries(RtAudio PUBLIC "dsound" "ole32") +- target_compile_definitions(RtAudio PUBLIC "__WINDOWS_WASAPI__") +- target_link_libraries(RtAudio PUBLIC "ksguid") +- target_compile_definitions(RtAudio PUBLIC "__WINDOWS_ASIO__") +- target_include_directories(RtAudio PRIVATE +- "src/audio/external/rtaudio/include") +- target_sources(RtAudio PRIVATE +- "src/audio/external/rtaudio/include/asio.cpp" +- "src/audio/external/rtaudio/include/asiodrivers.cpp" +- "src/audio/external/rtaudio/include/asiolist.cpp" +- "src/audio/external/rtaudio/include/iasiothiscallresolver.cpp") +- elseif(CMAKE_SYSTEM_NAME STREQUAL "Darwin") +- target_compile_definitions(RtAudio PUBLIC "__MACOSX_CORE__") +- find_library(COREAUDIO_LIBRARY "CoreAudio") +- target_link_libraries(RtAudio PUBLIC "${COREAUDIO_LIBRARY}") +- find_library(COREFOUNDATION_LIBRARY "CoreFoundation") +- target_link_libraries(RtAudio PUBLIC "${COREFOUNDATION_LIBRARY}") + endif() ++ ++ if(NOT RTAUDIO_FOUND) ++ message("Using bundled RtAudio.") ++ add_library(RtAudio STATIC "src/audio/external/rtaudio/RtAudio.cpp") ++ target_include_directories(RtAudio PUBLIC "src/audio/external/rtaudio") ++ if(CMAKE_SYSTEM_NAME STREQUAL "Linux") ++ target_compile_definitions(RtAudio PUBLIC "__LINUX_ALSA__") ++ target_link_libraries(RtAudio PUBLIC "asound") ++ if(JACK_FOUND) ++ target_compile_definitions(RtAudio PUBLIC "__UNIX_JACK__") ++ target_include_directories(RtAudio PUBLIC ${JACK_INCLUDE_DIRS}) ++ link_directories(${JACK_LIBRARY_DIRS}) ++ target_link_libraries(RtAudio PUBLIC ${JACK_LIBRARIES}) ++ endif() ++ if(PULSEAUDIO_FOUND) ++ target_compile_definitions(RtAudio PUBLIC "__LINUX_PULSE__") ++ target_include_directories(RtAudio PUBLIC ${PULSEAUDIO_INCLUDE_DIRS}) ++ link_directories(${PULSEAUDIO_LIBRARY_DIRS}) ++ target_link_libraries(RtAudio PUBLIC ${PULSEAUDIO_LIBRARIES}) ++ endif() ++ elseif(CMAKE_SYSTEM_NAME STREQUAL "Windows") ++ target_compile_definitions(RtAudio PUBLIC "__WINDOWS_DS__") ++ target_link_libraries(RtAudio PUBLIC "dsound" "ole32") ++ target_compile_definitions(RtAudio PUBLIC "__WINDOWS_WASAPI__") ++ target_link_libraries(RtAudio PUBLIC "ksguid") ++ target_compile_definitions(RtAudio PUBLIC "__WINDOWS_ASIO__") ++ target_include_directories(RtAudio PRIVATE ++ "src/audio/external/rtaudio/include") ++ target_sources(RtAudio PRIVATE ++ "src/audio/external/rtaudio/include/asio.cpp" ++ "src/audio/external/rtaudio/include/asiodrivers.cpp" ++ "src/audio/external/rtaudio/include/asiolist.cpp" ++ "src/audio/external/rtaudio/include/iasiothiscallresolver.cpp") ++ elseif(CMAKE_SYSTEM_NAME STREQUAL "Darwin") ++ target_compile_definitions(RtAudio PUBLIC "__MACOSX_CORE__") ++ find_library(COREAUDIO_LIBRARY "CoreAudio") ++ target_link_libraries(RtAudio PUBLIC "${COREAUDIO_LIBRARY}") ++ find_library(COREFOUNDATION_LIBRARY "CoreFoundation") ++ target_link_libraries(RtAudio PUBLIC "${COREFOUNDATION_LIBRARY}") ++ endif() ++ target_link_libraries(OPN2BankEditor PRIVATE RtAudio) ++ endif() ++ + target_sources(OPN2BankEditor PRIVATE "src/audio/ao_rtaudio.cpp") + target_compile_definitions(OPN2BankEditor PRIVATE "ENABLE_AUDIO_TESTING") +- target_link_libraries(OPN2BankEditor PRIVATE RtAudio) + endif() + + add_executable(measurer_tool +-- +2.29.3 + diff --git a/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/common.nix b/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/common.nix new file mode 100644 index 0000000000..9f6972ce95 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/common.nix @@ -0,0 +1,69 @@ +{ pname, chip, version, sha256, extraPatches ? [] }: + +{ mkDerivation +, stdenv +, lib +, fetchFromGitHub +, dos2unix +, cmake +, pkg-config +, qttools +, qtbase +, qwt +, rtaudio +, rtmidi +}: + +let + binname = "${chip} Bank Editor"; + mainProgram = "${lib.strings.toLower chip}_bank_editor"; +in +mkDerivation rec { + inherit pname version; + + src = fetchFromGitHub { + owner = "Wohlstand"; + repo = pname; + rev = "v${version}"; + inherit sha256; + }; + + prePatch = '' + dos2unix CMakeLists.txt + ''; + + patches = extraPatches; + + nativeBuildInputs = [ + dos2unix + cmake + pkg-config + qttools + ]; + + buildInputs = [ + qtbase + qwt + rtaudio + rtmidi + ]; + + postInstall = lib.optionalString stdenv.hostPlatform.isDarwin '' + mkdir $out/{bin,Applications} + mv "${binname}.app" $out/Applications/ + + install_name_tool -change {,${qwt}/lib/}libqwt.6.dylib "$out/Applications/${binname}.app/Contents/MacOS/${binname}" + wrapQtApp "$out/Applications/${binname}.app/Contents/MacOS/${binname}" + + ln -s "$out/Applications/${binname}.app/Contents/MacOS/${binname}" $out/bin/${mainProgram} + ''; + + meta = with lib; { + inherit mainProgram; + description = "A small cross-platform editor of the ${chip} FM banks of different formats"; + homepage = src.meta.homepage; + license = licenses.gpl3Plus; + platforms = platforms.all; + maintainers = with maintainers; [ OPNA2608 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/default.nix b/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/default.nix index 0c82d09f99..85762bb69b 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/default.nix @@ -1,27 +1,9 @@ -{ lib, mkDerivation, fetchFromGitHub, cmake, qttools, alsaLib }: - -mkDerivation rec { +import ./common.nix rec { + pname = "opl3bankeditor"; + chip = "OPL3"; version = "1.5.1"; - pname = "OPL3BankEditor"; - - src = fetchFromGitHub { - owner = "Wohlstand"; - repo = pname; - rev = "v${version}"; - sha256 = "1g59qrkcm4xnyxx0s2x28brqbf2ix6vriyx12pcdvfhhcdi55hxh"; - fetchSubmodules = true; - }; - - buildInputs = [ - alsaLib qttools + sha256 = "08krbxlxgmc7i2r2k6d6wgi0m6k8hh3j60xf21kz4kp023w613sa"; + extraPatches = [ + ./0001-opl3bankeditor-Look-for-system-installed-Rt-libs.patch ]; - nativeBuildInputs = [ cmake ]; - - meta = with lib; { - description = "A small cross-platform editor of the OPL3 FM banks of different formats"; - homepage = src.meta.homepage; - license = licenses.gpl3; - platforms = platforms.linux; - maintainers = with maintainers; [ ]; - }; } diff --git a/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/opn2bankeditor.nix b/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/opn2bankeditor.nix index 1d10452470..d9c4bbe151 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/opn2bankeditor.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/opl3bankeditor/opn2bankeditor.nix @@ -1,14 +1,9 @@ -{ opl3bankeditor, fetchFromGitHub }: - -opl3bankeditor.overrideAttrs (oldAttrs: rec { +import ./common.nix rec { + pname = "opn2bankeditor"; + chip = "OPN2"; version = "1.3"; - pname = "OPN2BankEditor"; - - src = fetchFromGitHub { - owner = "Wohlstand"; - repo = pname; - rev = "v${version}"; - sha256 = "0xsvv0gxqh1lx22f1jm384f7mq1jp57fmpsx1jjaxz435w5hf8s0"; - fetchSubmodules = true; - }; -}) + sha256 = "0niam6a6y57msbl0xj23g6l7gisv4a670q0k1zqfm34804532a32"; + extraPatches = [ + ./0001-opn2bankeditor-Look-for-system-installed-Rt-libs.patch + ]; +} diff --git a/third_party/nixpkgs/pkgs/tools/audio/pnmixer/default.nix b/third_party/nixpkgs/pkgs/tools/audio/pnmixer/default.nix index 3aca8e8f61..da4654a3e5 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/pnmixer/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/pnmixer/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, cmake, pkg-config, gettext, alsaLib, gtk3, glib, libnotify, libX11, pcre }: +{ lib, stdenv, fetchFromGitHub, cmake, pkg-config, gettext, alsa-lib, gtk3, glib, libnotify, libX11, pcre }: stdenv.mkDerivation rec { pname = "pnmixer"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config gettext ]; - buildInputs = [ alsaLib gtk3 glib libnotify libX11 pcre ]; + buildInputs = [ alsa-lib gtk3 glib libnotify libX11 pcre ]; meta = with lib; { homepage = "https://github.com/nicklan/pnmixer"; diff --git a/third_party/nixpkgs/pkgs/tools/audio/qastools/default.nix b/third_party/nixpkgs/pkgs/tools/audio/qastools/default.nix index 55dbba007f..f8b705a8fa 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/qastools/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/qastools/default.nix @@ -1,4 +1,4 @@ -{ mkDerivation, lib, fetchFromGitLab, cmake, alsaLib, udev, qtbase, qtsvg, qttools }: +{ mkDerivation, lib, fetchFromGitLab, cmake, alsa-lib, udev, qtbase, qtsvg, qttools }: mkDerivation rec { pname = "qastools"; @@ -12,7 +12,7 @@ mkDerivation rec { }; nativeBuildInputs = [ cmake ]; - buildInputs = [ alsaLib udev qtbase qtsvg qttools ]; + buildInputs = [ alsa-lib udev qtbase qtsvg qttools ]; meta = with lib; { description = "Collection of desktop applications for ALSA configuration"; diff --git a/third_party/nixpkgs/pkgs/tools/audio/spotdl/default.nix b/third_party/nixpkgs/pkgs/tools/audio/spotdl/default.nix index 38f69b4d2b..71e8615a11 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/spotdl/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/spotdl/default.nix @@ -6,13 +6,13 @@ python3.pkgs.buildPythonApplication rec { pname = "spotdl"; - version = "3.6.1"; + version = "3.6.3"; src = fetchFromGitHub { owner = "spotDL"; repo = "spotify-downloader"; rev = "v${version}"; - sha256 = "sha256-F3bP8f1LtcFZL7qahYkCUvhtc27fcL8WBnmyLcS9lCY="; + sha256 = "sha256-Ok8DOw+Joy35IqN7sNOQcUWYJS8tqBeQ5/I8fUSly7Q="; }; propagatedBuildInputs = with python3.pkgs; [ diff --git a/third_party/nixpkgs/pkgs/tools/audio/trx/default.nix b/third_party/nixpkgs/pkgs/tools/audio/trx/default.nix index c7445f03fd..b3ffee6419 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/trx/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/trx/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, libopus, ortp, bctoolbox }: +{ lib, stdenv, fetchurl, alsa-lib, libopus, ortp, bctoolbox }: stdenv.mkDerivation rec { pname = "trx"; @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { ./add_bctoolbox_ldlib.patch ]; - buildInputs = [ alsaLib libopus ortp bctoolbox ]; + buildInputs = [ alsa-lib libopus ortp bctoolbox ]; makeFlags = [ "PREFIX=$(out)" ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/tools/audio/tts/default.nix b/third_party/nixpkgs/pkgs/tools/audio/tts/default.nix index 51976a2d6a..0e57e19a28 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/tts/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/tts/default.nix @@ -12,20 +12,20 @@ # # If you upgrade from an old version you may have to delete old models from ~/.local/share/tts # Also note that your tts version might not support all available models so check: -# https://github.com/coqui-ai/TTS/releases/tag/v0.0.14 +# https://github.com/coqui-ai/TTS/releases/tag/v0.0.15.1 # # For now, for deployment check the systemd unit in the pull request: # https://github.com/NixOS/nixpkgs/pull/103851#issue-521121136 python3Packages.buildPythonApplication rec { pname = "tts"; - version = "0.0.14"; + version = "0.0.15.1"; src = fetchFromGitHub { owner = "coqui-ai"; repo = "TTS"; rev = "v${version}"; - sha256 = "0cl0ri90mx0y19fmqww73lp5nv6qkpc45rm4157i7p6q6llajdhp"; + sha256 = "0z6sbzspgmw5ja8r2zysyhdk4jzlv88a0ihkvxvvwxslkyncdb89"; }; postPatch = '' @@ -41,6 +41,7 @@ python3Packages.buildPythonApplication rec { ]; propagatedBuildInputs = with python3Packages; [ + anyascii coqpit flask gdown @@ -48,6 +49,7 @@ python3Packages.buildPythonApplication rec { jieba librosa matplotlib + mecab-python3 numba pandas pypinyin @@ -56,9 +58,10 @@ python3Packages.buildPythonApplication rec { scipy soundfile tensorboardx + tensorflow tqdm umap-learn - unidecode + unidic-lite ]; postInstall = '' @@ -100,16 +103,15 @@ python3Packages.buildPythonApplication rec { disabledTestPaths = [ # requires tensorflow - "tests/test_tacotron2_tf_model.py" "tests/vocoder_tests/test_vocoder_tf_pqmf.py" "tests/vocoder_tests/test_vocoder_tf_melgan_generator.py" + "tests/tts_tests/test_tacotron2_tf_model.py" # RuntimeError: fft: ATen not compiled with MKL support "tests/vocoder_tests/test_fullband_melgan_train.py" "tests/vocoder_tests/test_hifigan_train.py" "tests/vocoder_tests/test_melgan_train.py" "tests/vocoder_tests/test_multiband_melgan_train.py" "tests/vocoder_tests/test_parallel_wavegan_train.py" - ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/tools/audio/volumeicon/default.nix b/third_party/nixpkgs/pkgs/tools/audio/volumeicon/default.nix index 79dc5a356b..4d726cbd2a 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/volumeicon/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/volumeicon/default.nix @@ -1,4 +1,4 @@ -{ pkgs, fetchurl, lib, stdenv, gtk3, pkg-config, intltool, alsaLib }: +{ pkgs, fetchurl, lib, stdenv, gtk3, pkg-config, intltool, alsa-lib }: stdenv.mkDerivation { pname = "volumeicon"; @@ -10,7 +10,7 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ gtk3 intltool alsaLib ]; + buildInputs = [ gtk3 intltool alsa-lib ]; meta = with lib; { description = "A lightweight volume control that sits in your systray"; diff --git a/third_party/nixpkgs/pkgs/tools/audio/yabridge/default.nix b/third_party/nixpkgs/pkgs/tools/audio/yabridge/default.nix index 0013fac23a..cbe35765cb 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/yabridge/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/yabridge/default.nix @@ -1,7 +1,6 @@ { lib , stdenv , fetchFromGitHub -, fetchpatch , substituteAll , meson , ninja @@ -58,14 +57,14 @@ let }; in stdenv.mkDerivation rec { pname = "yabridge"; - version = "3.2.0"; + version = "3.3.1"; # NOTE: Also update yabridgectl's cargoHash when this is updated src = fetchFromGitHub { owner = "robbert-vdh"; repo = pname; rev = version; - hash = "sha256-UT6st0Rc6HOaObE3N+qlPZZ8U1gl/MFLU0mjFuScdes="; + hash = "sha256-3B+6YuCWVJljqdyGpePjPf5JDwLSWFNgOCeLt8e4mO8="; }; # Unpack subproject sources @@ -80,13 +79,6 @@ in stdenv.mkDerivation rec { )''; patches = [ - # Fix for wine 6.8+ (remove patch in next release): - (fetchpatch { - url = "https://github.com/robbert-vdh/yabridge/commit/5577c4bfd842c60a8ae8ce2889bbfeb53a51c62b.patch"; - sha256 = "sha256-bTT08iWwDBVqi2PZPa7oal7/MqVu8t2Bh1gpjFMqLvQ="; - excludes = [ "CHANGELOG.md" ]; - }) - # Hard code wine path so wine version is correct in logs (substituteAll { src = ./hardcode-wine.patch; diff --git a/third_party/nixpkgs/pkgs/tools/audio/yabridgectl/default.nix b/third_party/nixpkgs/pkgs/tools/audio/yabridgectl/default.nix index 4f738310d8..bf0913372b 100644 --- a/third_party/nixpkgs/pkgs/tools/audio/yabridgectl/default.nix +++ b/third_party/nixpkgs/pkgs/tools/audio/yabridgectl/default.nix @@ -11,7 +11,7 @@ rustPlatform.buildRustPackage rec { src = yabridge.src; sourceRoot = "source/tools/yabridgectl"; - cargoHash = "sha256-cB4Xp8pNLQRcPQ6HtVkDkLbfNSmM9yl+oRcEzcqrmkY="; + cargoHash = "sha256-f5k5OF+bEzH0b6M14Mdp8t4Qd5dP5Qj2fDsdiG1MkYk="; patches = [ # By default, yabridgectl locates libyabridge.so by using @@ -34,5 +34,6 @@ rustPlatform.buildRustPackage rec { homepage = "https://github.com/robbert-vdh/yabridge/tree/master/tools/yabridgectl"; license = licenses.gpl3Plus; maintainers = with maintainers; [ kira-bruneau ]; + platforms = yabridge.meta.platforms; }; } diff --git a/third_party/nixpkgs/pkgs/tools/backup/bacula/default.nix b/third_party/nixpkgs/pkgs/tools/backup/bacula/default.nix index aca741175e..c37e789338 100644 --- a/third_party/nixpkgs/pkgs/tools/backup/bacula/default.nix +++ b/third_party/nixpkgs/pkgs/tools/backup/bacula/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "bacula"; - version = "11.0.3"; + version = "11.0.5"; src = fetchurl { url = "mirror://sourceforge/bacula/${pname}-${version}.tar.gz"; - sha256 = "sha256-AVh3NPdJD8t3N4AbLh/hsflHB7s/sLcbNnE8eqsDkjw="; + sha256 = "sha256-71s7Z4EEQiAbgNwdR8zvd7XtN4/hKFQG86c0AbboERo="; }; buildInputs = [ postgresql sqlite zlib ncurses openssl readline ] diff --git a/third_party/nixpkgs/pkgs/tools/backup/borgbackup/default.nix b/third_party/nixpkgs/pkgs/tools/backup/borgbackup/default.nix index 86eee2bc9a..d0e48454a3 100644 --- a/third_party/nixpkgs/pkgs/tools/backup/borgbackup/default.nix +++ b/third_party/nixpkgs/pkgs/tools/backup/borgbackup/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, python3, acl, libb2, lz4, zstd, openssl, openssh, nixosTests }: +{ lib, stdenv, python3, fetchpatch, acl, libb2, lz4, zstd, openssl, openssh, nixosTests }: python3.pkgs.buildPythonApplication rec { pname = "borgbackup"; @@ -9,6 +9,15 @@ python3.pkgs.buildPythonApplication rec { sha256 = "0l1dqfwrd9l34rg30cmzmq5bs6yha6kg4vy313jq611jsqj94mmw"; }; + patches = [ + # fix compatibility with sphinx 4 + (fetchpatch { + url = "https://github.com/borgbackup/borg/commit/6a1f31bf2914d167e2f5051f1d531d5d4a19f54b.patch"; + includes = [ "docs/conf.py" ]; + sha256 = "0aa4kyb3j4apgwqcy1hzg6lxvpf60m2mijcj60vh101b42410hiz"; + }) + ]; + nativeBuildInputs = with python3.pkgs; [ setuptools-scm # For building documentation: diff --git a/third_party/nixpkgs/pkgs/tools/backup/duply/default.nix b/third_party/nixpkgs/pkgs/tools/backup/duply/default.nix index 82d6bd5c60..49ac645291 100644 --- a/third_party/nixpkgs/pkgs/tools/backup/duply/default.nix +++ b/third_party/nixpkgs/pkgs/tools/backup/duply/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "duply"; - version = "2.3"; + version = "2.3.1"; src = fetchurl { url = "mirror://sourceforge/project/ftplicity/duply%20%28simple%20duplicity%29/2.3.x/duply_${version}.tgz"; - sha256 = "sha256-I1KkblFnZVOCvcWEarGsSXnzlod2+yZ4okaTpckLFbE="; + sha256 = "149hb9bk7hm5h3aqf19k37d0i2jf0viaqmpq2997i48qp3agji7h"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/tools/backup/mastodon-archive/default.nix b/third_party/nixpkgs/pkgs/tools/backup/mastodon-archive/default.nix new file mode 100644 index 0000000000..10e500339e --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/backup/mastodon-archive/default.nix @@ -0,0 +1,32 @@ +{ lib +, fetchFromGitHub +, python3 +}: + +python3.pkgs.buildPythonApplication rec { + pname = "mastodon-archive"; + version = "1.3.1"; + + src = fetchFromGitHub { + owner = "kensanata"; + repo = "mastodon-backup"; + rev = "v${version}"; + sha256 = "1dlrkygywxwm6xbn0pnfwd3f7641wnvxdyb5qihbsf62w1w08x8r"; + }; + + propagatedBuildInputs = with python3.pkgs; [ + html2text + mastodon-py + progress + ]; + + # There is no test + doCheck = false; + + meta = with lib; { + description = "Utility for backing up your Mastodon content"; + homepage = "https://alexschroeder.ch/software/Mastodon_Archive"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ julm ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/bluetooth/blueberry/default.nix b/third_party/nixpkgs/pkgs/tools/bluetooth/blueberry/default.nix index b932b8e66c..9ff8394f00 100644 --- a/third_party/nixpkgs/pkgs/tools/bluetooth/blueberry/default.nix +++ b/third_party/nixpkgs/pkgs/tools/bluetooth/blueberry/default.nix @@ -14,13 +14,13 @@ stdenv.mkDerivation rec { pname = "blueberry"; - version = "1.4.2"; + version = "1.4.3"; src = fetchFromGitHub { owner = "linuxmint"; repo = pname; rev = version; - sha256 = "sha256-YwJQryIK92/Tc1s49jM3pCs7dmO3l+RbbFBtuXvhYbQ="; + sha256 = "sha256-UkF50AIFKkvjUHJiemR0Hj5ECZeHQU6beIw2TGrOlbk="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/tools/bluetooth/blueman/default.nix b/third_party/nixpkgs/pkgs/tools/bluetooth/blueman/default.nix index 7b3aa397fc..0939584fa9 100644 --- a/third_party/nixpkgs/pkgs/tools/bluetooth/blueman/default.nix +++ b/third_party/nixpkgs/pkgs/tools/bluetooth/blueman/default.nix @@ -9,11 +9,11 @@ let in stdenv.mkDerivation rec { pname = "blueman"; - version = "2.1.4"; + version = "2.2.1"; src = fetchurl { url = "https://github.com/blueman-project/blueman/releases/download/${version}/${pname}-${version}.tar.xz"; - sha256 = "1nk46s1s8yrlqv37sc7la05nnn7sdgqhkrcdm98qin34llwkv70x"; + sha256 = "0whs1bqnn1fgzrq7y2w1d06ldvfafq6h2xzmcfncbwmyb4i0mhgw"; }; nativeBuildInputs = [ @@ -27,18 +27,6 @@ in stdenv.mkDerivation rec { ++ pythonPath ++ lib.optional withPulseAudio libpulseaudio; - patches = [ - # Don't use etc/dbus-1/system.d - (fetchpatch { - url = "https://github.com/blueman-project/blueman/commit/ae2be5a70cdea1d1aa0e3ab1c85c1d3a0c4affc6.patch"; - sha256 = "0nb6jzlxhgjvac52cjwi0pi40b8v4h6z6pwz5vkyfmaj86spygg3"; - excludes = [ - "meson.build" - "Dependencies.md" - ]; - }) - ]; - postPatch = lib.optionalString withPulseAudio '' sed -i 's,CDLL(",CDLL("${libpulseaudio.out}/lib/,g' blueman/main/PulseAudioUtils.py ''; diff --git a/third_party/nixpkgs/pkgs/tools/bluetooth/bluez-alsa/default.nix b/third_party/nixpkgs/pkgs/tools/bluetooth/bluez-alsa/default.nix index 6867d7c8ce..a108d55c6b 100644 --- a/third_party/nixpkgs/pkgs/tools/bluetooth/bluez-alsa/default.nix +++ b/third_party/nixpkgs/pkgs/tools/bluetooth/bluez-alsa/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchFromGitHub, pkg-config, autoreconfHook -, alsaLib, bluez, glib, sbc, dbus +, alsa-lib, bluez, glib, sbc, dbus # optional, but useful utils , readline, libbsd, ncurses @@ -13,19 +13,19 @@ with lib; stdenv.mkDerivation rec { pname = "bluez-alsa"; - version = "3.0.0"; + version = "3.1.0"; src = fetchFromGitHub { owner = "Arkq"; repo = "bluez-alsa"; rev = "v${version}"; - sha256 = "1jlsgxyqfhncfhx1sy3ry0dp6p95kd4agh7g2b7g51h0c4cv74h8"; + sha256 = "sha256-bohc/0hUr1mcV2JbFy71TjY8MXOU3oBBPCcupgkWsWY="; }; nativeBuildInputs = [ pkg-config autoreconfHook ]; buildInputs = [ - alsaLib bluez glib sbc dbus + alsa-lib bluez glib sbc dbus readline libbsd ncurses ] ++ optional aacSupport fdk_aac; diff --git a/third_party/nixpkgs/pkgs/tools/cd-dvd/bootiso/default.nix b/third_party/nixpkgs/pkgs/tools/cd-dvd/bootiso/default.nix index e6a9024885..5acb901a54 100644 --- a/third_party/nixpkgs/pkgs/tools/cd-dvd/bootiso/default.nix +++ b/third_party/nixpkgs/pkgs/tools/cd-dvd/bootiso/default.nix @@ -5,6 +5,8 @@ , makeWrapper , bc , jq +, coreutils +, util-linux , wimlib , file , syslinux @@ -26,15 +28,12 @@ stdenvNoCC.mkDerivation rec { strictDeps = true; buildInputs = [ bash ]; nativeBuildInputs = [ makeWrapper ]; - postPatch = '' - patchShebangs --host bootiso - ''; makeFlags = [ "prefix=${placeholder "out"}" ]; postInstall = '' wrapProgram $out/bin/bootiso \ - --prefix PATH : ${lib.makeBinPath [ bc jq wimlib file syslinux gnugrep busybox ]} \ + --prefix PATH : ${lib.makeBinPath [ bc jq coreutils util-linux wimlib file syslinux gnugrep busybox ]} \ --prefix BOOTISO_SYSLINUX_LIB_ROOT : ${syslinux}/share/syslinux ''; diff --git a/third_party/nixpkgs/pkgs/tools/compression/flips/default.nix b/third_party/nixpkgs/pkgs/tools/compression/flips/default.nix index e99f3fec16..b4a79aac21 100644 --- a/third_party/nixpkgs/pkgs/tools/compression/flips/default.nix +++ b/third_party/nixpkgs/pkgs/tools/compression/flips/default.nix @@ -2,20 +2,24 @@ stdenv.mkDerivation { pname = "flips"; - version = "unstable-2020-10-02"; + version = "unstable-2021-05-18"; src = fetchFromGitHub { owner = "Alcaro"; repo = "Flips"; - rev = "5a3d2012b8ea53ae777c24b8ac4edb9a6bdb9761"; - sha256 = "1ksh9j1n5z8b78yd7gjxswndsqnb1azp84xk4rc0p7zq127l0fyy"; + rev = "3476e5e46fc6f10df475f0cad1714358ba04c756"; + sha256 = "0s13qrmqfmlb2vy0smpgw39vjkl8vzsmpzk52jnc9r7b4hisii39"; }; nativeBuildInputs = [ pkg-config wrapGAppsHook ]; buildInputs = [ gtk3 libdivsufsort ]; patches = [ ./use-system-libdivsufsort.patch ]; makeFlags = [ "PREFIX=${placeholder "out"}" ]; - buildPhase = "./make.sh"; + buildPhase = '' + runHook preBuild + ./make.sh + runHook postBuild + ''; meta = with lib; { description = "A patcher for IPS and BPS files"; diff --git a/third_party/nixpkgs/pkgs/tools/compression/lz4/default.nix b/third_party/nixpkgs/pkgs/tools/compression/lz4/default.nix index e2bb98a4b8..94f739a6c5 100644 --- a/third_party/nixpkgs/pkgs/tools/compression/lz4/default.nix +++ b/third_party/nixpkgs/pkgs/tools/compression/lz4/default.nix @@ -14,6 +14,19 @@ stdenv.mkDerivation rec { owner = pname; }; + patches = [ + (fetchpatch { # https://github.com/lz4/lz4/pull/972 + name = "CVE-2021-3520.patch"; + url = "https://github.com/lz4/lz4/commit/8301a21773ef61656225e264f4f06ae14462bca7.patch"; + sha256 = "0r1cwpqdkdc8im0pf2r5jp7mwwn69xcw405rrk7rc0mpjcp5ydfk"; + }) + (fetchpatch { # https://github.com/lz4/lz4/pull/973 + name = "avoid-null-pointer-dereference.patch"; + url = "https://github.com/lz4/lz4/commit/29a6a1f4941e7243241fe00d6c13b749fd6b60c2.patch"; + sha256 = "0v5yl5hd3qrfm3xm7m06j4b21qwllb4cqkjn2az7x1vnzqgpf8y7"; + }) + ]; + # TODO(@Ericson2314): Separate binaries and libraries outputs = [ "bin" "out" "dev" ]; diff --git a/third_party/nixpkgs/pkgs/tools/compression/zstd/default.nix b/third_party/nixpkgs/pkgs/tools/compression/zstd/default.nix index e890518a45..a89453b55f 100644 --- a/third_party/nixpkgs/pkgs/tools/compression/zstd/default.nix +++ b/third_party/nixpkgs/pkgs/tools/compression/zstd/default.nix @@ -7,13 +7,13 @@ stdenv.mkDerivation rec { pname = "zstd"; - version = "1.4.9"; + version = "1.5.0"; src = fetchFromGitHub { owner = "facebook"; repo = "zstd"; rev = "v${version}"; - sha256 = "18alxnym54gswsmsr5ra82q4k1q5fyzsyx0jykb2sk2nkpvx7334"; + sha256 = "0icc0x89c35rq5bxd4d241vqxnz2i1qj2wwy01xls63p0z93brj7"; }; nativeBuildInputs = [ cmake ] diff --git a/third_party/nixpkgs/pkgs/tools/compression/zstd/playtests-darwin.patch b/third_party/nixpkgs/pkgs/tools/compression/zstd/playtests-darwin.patch index f829c93c70..bcb895a697 100644 --- a/third_party/nixpkgs/pkgs/tools/compression/zstd/playtests-darwin.patch +++ b/third_party/nixpkgs/pkgs/tools/compression/zstd/playtests-darwin.patch @@ -1,6 +1,6 @@ --- a/tests/playTests.sh +++ b/tests/playTests.sh -@@ -112,17 +112,10 @@ case "$OS" in +@@ -112,22 +112,12 @@ case "$OS" in esac case "$UNAME" in @@ -16,13 +16,18 @@ - Darwin | FreeBSD | OpenBSD | NetBSD) MTIME="stat -f %m" ;; -esac - DIFF="diff" - case "$UNAME" in -@@ -842,7 +835,6 @@ $MD5SUM dirTestDict/* > tmph1 + GET_PERMS="stat -c %a" +-case "$UNAME" in +- Darwin | FreeBSD | OpenBSD | NetBSD) GET_PERMS="stat -f %Lp" ;; +-esac + + assertFilePermissions() { + STAT1=$($GET_PERMS "$1") +@@ -967,7 +957,6 @@ $MD5SUM dirTestDict/* > tmph1 zstd -f --rm dirTestDict/* -D tmpDictC zstd -d --rm dirTestDict/*.zst -D tmpDictC # note : use internal checksum by default case "$UNAME" in - Darwin) println "md5sum -c not supported on OS-X : test skipped" ;; # not compatible with OS-X's md5 *) $MD5SUM -c tmph1 ;; esac - rm -rf dirTestDict \ No newline at end of file + rm -rf dirTestDict diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/apfsprogs/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/apfsprogs/default.nix new file mode 100644 index 0000000000..b50eaf3963 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/filesystems/apfsprogs/default.nix @@ -0,0 +1,38 @@ +{ lib +, stdenv +, fetchFromGitHub +}: + +stdenv.mkDerivation { + pname = "apfsprogs"; + version = "unstable-2021-05-07"; + + src = fetchFromGitHub { + owner = "linux-apfs"; + repo = "apfsprogs"; + rev = "d360211a30608a907e3ee8ad4468d606c40ec2d7"; + sha256 = "sha256-SeFs/GQfIEvnxERyww+mnynjR7E02DdtBA6JsknEM+Q="; + }; + + buildPhase = '' + runHook preBuild + make -C apfsck $makeFlags + make -C mkapfs $makeFlags + runHook postBuild + ''; + + installPhase = '' + runHook preInstall + make -C apfsck install BINDIR="$out/bin" MANDIR="$out/share/man8" $installFlags + make -C mkapfs install BINDIR="$out/bin" MANDIR="$out/share/man8" $installFlags + runHook postInstall + ''; + + meta = with lib; { + description = "Experimental APFS tools for linux"; + homepage = "https://github.com/linux-apfs/apfsprogs"; + license = licenses.gpl2Only; + platforms = platforms.linux; + maintainers = with maintainers; [ Luflosi ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/bees/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/bees/default.nix index 7ba27208fe..c82ea23deb 100644 --- a/third_party/nixpkgs/pkgs/tools/filesystems/bees/default.nix +++ b/third_party/nixpkgs/pkgs/tools/filesystems/bees/default.nix @@ -1,26 +1,35 @@ -{ lib, stdenv, runCommand, fetchFromGitHub, bash, btrfs-progs, coreutils -, python3Packages, util-linux, nixosTests }: +{ lib +, stdenv +, runCommand +, fetchFromGitHub +, bash +, btrfs-progs +, coreutils +, python3Packages +, util-linux +, nixosTests +}: let bees = stdenv.mkDerivation rec { pname = "bees"; - version = "0.6.3"; + version = "0.6.5"; src = fetchFromGitHub { owner = "Zygo"; repo = "bees"; rev = "v${version}"; - sha256 = "sha256-brEjr7lhmKDCIDeLq+XP+ZTxv1RvwoUlszMSEYygxv8="; + sha256 = "11ppbf23b8ngzfy02am0skxlybzmgsp6kna21jimb01x9pp1q7l7"; }; buildInputs = [ - btrfs-progs # for btrfs/ioctl.h - util-linux # for uuid.h + btrfs-progs # for btrfs/ioctl.h + util-linux # for uuid.h ]; nativeBuildInputs = [ - python3Packages.markdown # documentation build + python3Packages.markdown # documentation build ]; preBuild = '' @@ -56,11 +65,12 @@ let in -(runCommand "bees-service" { - inherit bash bees coreutils; - utillinux = util-linux; # needs to be a valid shell variable name - btrfsProgs = btrfs-progs; # needs to be a valid shell variable name -} '' +(runCommand "bees-service" + { + inherit bash bees coreutils; + utillinux = util-linux; # needs to be a valid shell variable name + btrfsProgs = btrfs-progs; # needs to be a valid shell variable name + } '' mkdir -p -- "$out/bin" substituteAll ${./bees-service-wrapper} "$out"/bin/bees-service-wrapper chmod +x "$out"/bin/bees-service-wrapper diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/btrfs-progs/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/btrfs-progs/default.nix index 9a05a0d67f..aad633f3ba 100644 --- a/third_party/nixpkgs/pkgs/tools/filesystems/btrfs-progs/default.nix +++ b/third_party/nixpkgs/pkgs/tools/filesystems/btrfs-progs/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "btrfs-progs"; - version = "5.11.1"; + version = "5.12.1"; src = fetchurl { url = "mirror://kernel/linux/kernel/people/kdave/btrfs-progs/btrfs-progs-v${version}.tar.xz"; - sha256 = "sha256-46rMxHVuxOVQLLKp+Ftn1SiWZE9MPA+IprxZjHC96/4="; + sha256 = "sha256-lQhG/qRU+0scOfD6RUmDZEVy35HfXAYEezNb8tVHN1k="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/ceph-csi/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/ceph-csi/default.nix new file mode 100644 index 0000000000..7f468c8096 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/filesystems/ceph-csi/default.nix @@ -0,0 +1,33 @@ +{ stdenv, lib, go, ceph, fetchFromGitHub }: + +stdenv.mkDerivation rec { + pname = "ceph-csi"; + version = "3.3.1"; + + nativeBuildInputs = [ go ]; + buildInputs = [ ceph ]; + + src = fetchFromGitHub { + owner = "ceph"; + repo = "ceph-csi"; + rev = "v${version}"; + sha256 = "16nh4bh8a9s2zbxnnhq1ldww4dzp2fmf5idgq99vkyw2kfp017lf"; + }; + + preConfigure = '' + export GOCACHE=$(pwd)/.cache + ''; + + installPhase = '' + mkdir -p $out/bin + cp ./_output/* $out/bin + ''; + + meta = with lib; { + homepage = "https://ceph.com/"; + description = "Container Storage Interface (CSI) driver for Ceph RBD and CephFS"; + license = [ licenses.asl20 ]; + maintainers = with maintainers; [ johanot ]; + platforms = [ "x86_64-linux" "aarch64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/ceph/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/ceph/default.nix index 52bce3f274..a25bf744a9 100644 --- a/third_party/nixpkgs/pkgs/tools/filesystems/ceph/default.nix +++ b/third_party/nixpkgs/pkgs/tools/filesystems/ceph/default.nix @@ -2,7 +2,7 @@ , ensureNewerSourcesHook , cmake, pkg-config , which, git -, boost, python3Packages +, boost , libxml2, zlib, lz4 , openldap, lttng-ust , babeltrace, gperf @@ -92,19 +92,35 @@ let platforms = [ "x86_64-linux" "aarch64-linux" ]; }; - ceph-common = python3Packages.buildPythonPackage rec{ + ceph-common = python.pkgs.buildPythonPackage rec{ pname = "ceph-common"; inherit src version; sourceRoot = "ceph-${version}/src/python-common"; - checkInputs = [ python3Packages.pytest ]; - propagatedBuildInputs = with python3Packages; [ pyyaml six ]; + checkInputs = [ python.pkgs.pytest ]; + propagatedBuildInputs = with python.pkgs; [ pyyaml six ]; meta = getMeta "Ceph common module for code shared by manager modules"; }; - ceph-python-env = python3Packages.python.withPackages (ps: [ + python = python3.override { + packageOverrides = self: super: { + # scipy > 1.3 breaks diskprediction_local, leading to mgr hang on startup + # Bump once these issues are resolved: + # https://tracker.ceph.com/issues/42764 https://tracker.ceph.com/issues/45147 + scipy = super.scipy.overridePythonAttrs (oldAttrs: rec { + version = "1.3.3"; + src = oldAttrs.src.override { + inherit version; + sha256 = "02iqb7ws7fw5fd1a83hx705pzrw1imj7z0bphjsl4bfvw254xgv4"; + }; + doCheck = false; + }); + }; + }; + + ceph-python-env = python.withPackages (ps: [ ps.sphinx ps.flask ps.cython @@ -122,10 +138,7 @@ let ps.pyjwt ps.webob ps.bcrypt - # scipy > 1.3 breaks diskprediction_local, leading to mgr hang on startup - # Bump (and get rid of scipy_1_3) once these issues are resolved: - # https://tracker.ceph.com/issues/42764 https://tracker.ceph.com/issues/45147 - ps.scipy_1_3 + ps.scipy ps.six ps.pyyaml ]); @@ -147,10 +160,10 @@ in rec { nativeBuildInputs = [ cmake - pkg-config which git python3Packages.wrapPython makeWrapper - python3Packages.python # for the toPythonPath function + pkg-config which git python.pkgs.wrapPython makeWrapper + python.pkgs.python # for the toPythonPath function (ensureNewerSourcesHook { year = "1980"; }) - python3 + python fmt # for building docs/man-pages presumably doxygen diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/fuse-overlayfs/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/fuse-overlayfs/default.nix index 3631e52d87..a3cb67c1bd 100644 --- a/third_party/nixpkgs/pkgs/tools/filesystems/fuse-overlayfs/default.nix +++ b/third_party/nixpkgs/pkgs/tools/filesystems/fuse-overlayfs/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "fuse-overlayfs"; - version = "1.5.0"; + version = "1.6"; src = fetchFromGitHub { owner = "containers"; repo = pname; rev = "v${version}"; - sha256 = "sha256-/gdmrQhYsE4a/1sxtJ5IfVUWjh08wTVrOr4V7Fkn1i0="; + sha256 = "sha256-YNR9Cj2StbmA2MjoQEWgJCMoHXQ1wIYikXGUEkmJEIg="; }; nativeBuildInputs = [ autoreconfHook pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/gcsfuse/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/gcsfuse/default.nix index ee7f867607..92d35338d1 100644 --- a/third_party/nixpkgs/pkgs/tools/filesystems/gcsfuse/default.nix +++ b/third_party/nixpkgs/pkgs/tools/filesystems/gcsfuse/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { pname = "gcsfuse"; - version = "0.35.0"; + version = "0.35.1"; src = fetchFromGitHub { owner = "googlecloudplatform"; repo = "gcsfuse"; rev = "v${version}"; - sha256 = "sha256-GJ21Cqd/W/PocmN1p4OeeUdswhH7fSmAMiNTs0X3564="; + sha256 = "sha256-A6vhdECKMq0kcR7mUTPu9F0N7gVj7tOg7UXeJ/gmbnM="; }; goPackagePath = "github.com/googlecloudplatform/gcsfuse"; diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/gocryptfs/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/gocryptfs/default.nix index b8b330c129..c2e022ca4b 100644 --- a/third_party/nixpkgs/pkgs/tools/filesystems/gocryptfs/default.nix +++ b/third_party/nixpkgs/pkgs/tools/filesystems/gocryptfs/default.nix @@ -1,28 +1,42 @@ { lib +, stdenv , buildGoModule , fetchFromGitHub , openssl , pandoc , pkg-config +, libfido2 }: +let + # pandoc is currently broken on aarch64-darwin + # because of missing ghc + brokenPandoc = stdenv.isDarwin && stdenv.isAarch64; +in + buildGoModule rec { pname = "gocryptfs"; - version = "1.8.0"; + version = "2.0.1"; src = fetchFromGitHub { owner = "rfjakob"; repo = pname; rev = "v${version}"; - sha256 = "1acalwrr5xqhpqca3gypj0s68w6vpckxmg5z5gfgh8wx6nqx4aw9"; + sha256 = "0wiagmym8mwi0vpvrs5ryn3zjwha8ilh7xkavvkd1gqd5laln0kp"; }; - runVend = true; - vendorSha256 = "0z3y51sgr1rmr23jpc5h5d5lw14p3qzv48rc7zj7qa4rd5cfhsgi"; + vendorSha256 = "10az8n7z4rhsk1af2x6v3pmxg4zp7c9cal35ily8bdzzcb9cpgs0"; + + nativeBuildInputs = [ + pkg-config + ] ++ lib.optionals (!brokenPandoc) [ + pandoc + ]; - nativeBuildInputs = [ pandoc pkg-config ]; buildInputs = [ openssl ]; + propagatedBuildInputs = [ libfido2 ]; + buildFlagsArray = '' -ldflags= -X main.GitVersion=${version} @@ -32,9 +46,10 @@ buildGoModule rec { subPackages = [ "." "gocryptfs-xray" "contrib/statfs" ]; - postBuild = '' + postBuild = lib.optionalString (!brokenPandoc) '' pushd Documentation/ mkdir -p $out/share/man/man1 + # taken from Documentation/MANPAGE-render.bash pandoc MANPAGE.md -s -t man -o $out/share/man/man1/gocryptfs.1 pandoc MANPAGE-XRAY.md -s -t man -o $out/share/man/man1/gocryptfs-xray.1 pandoc MANPAGE-STATFS.md -s -t man -o $out/share/man/man1/statfs.1 diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/goofys/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/goofys/default.nix new file mode 100644 index 0000000000..94ce7be08e --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/filesystems/goofys/default.nix @@ -0,0 +1,34 @@ +{ lib +, buildGoModule +, fetchFromGitHub +}: + +buildGoModule { + pname = "goofys"; + version = "unstable-2021-03-26"; + + src = fetchFromGitHub { + owner = "kahing"; + repo = "goofys"; + # Same as v0.24.0 but migrated to Go modules + rev = "0c993271269b539196330a18716a33fbeeebd624"; + sha256 = "18is5sv2a9wmsm0qpakly988z1qyl2b2hf2105lpxrgl659sf14p"; + }; + + vendorSha256 = "15yq0msh9icxd5n2zkkqrlwxifizhpa99d4aznv8clg32ybs61fj"; + + subPackages = [ "." ]; + + # Tests are using networking + postPatch = '' + rm internal/*_test.go + ''; + + meta = { + homepage = "https://github.com/kahing/goofys"; + description = "A high-performance, POSIX-ish Amazon S3 file system written in Go."; + license = [ lib.licenses.mit ]; + maintainers = [ lib.maintainers.adisbladis ]; + }; + +} diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/mtools/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/mtools/default.nix index 8f83f800b6..4618a9b3b7 100644 --- a/third_party/nixpkgs/pkgs/tools/filesystems/mtools/default.nix +++ b/third_party/nixpkgs/pkgs/tools/filesystems/mtools/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "mtools"; - version = "4.0.27"; + version = "4.0.31"; src = fetchurl { url = "mirror://gnu/mtools/${pname}-${version}.tar.bz2"; - sha256 = "1crqi10adwfahj8xyw60lx70hkpcc5g00b5r8277cm2f4kcwi24w"; + sha256 = "11nm5mhsq700f3dzvzjpcik89cfcn38mb249yc0sjbwggwkrk2ak"; }; patches = lib.optional stdenv.isDarwin ./UNUSED-darwin.patch; diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/rar2fs/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/rar2fs/default.nix index ddd37387fa..19db209cbf 100644 --- a/third_party/nixpkgs/pkgs/tools/filesystems/rar2fs/default.nix +++ b/third_party/nixpkgs/pkgs/tools/filesystems/rar2fs/default.nix @@ -7,13 +7,13 @@ stdenv.mkDerivation rec { pname = "rar2fs"; - version = "1.29.4"; + version = "1.29.5"; src = fetchFromGitHub { owner = "hasse69"; repo = pname; rev = "v${version}"; - sha256 = "sha256-O14KuzngzsGazvwz3FCPe0SplO8I6CPJjpCLBPcZq6k="; + sha256 = "sha256-x3QBnnwt9pXT0egOJ2rnUcZP99y9eVcw3rNTkdH2LYs="; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/tools/filesystems/sshfs-fuse/default.nix b/third_party/nixpkgs/pkgs/tools/filesystems/sshfs-fuse/default.nix index e575bd3e13..879199347b 100644 --- a/third_party/nixpkgs/pkgs/tools/filesystems/sshfs-fuse/default.nix +++ b/third_party/nixpkgs/pkgs/tools/filesystems/sshfs-fuse/default.nix @@ -22,7 +22,7 @@ in if stdenv.isDarwin then } else mkSSHFS { - version = "3.7.1"; - sha256 = "088mgcsqv9f2vly4xn6lvvkmqkgr9jjmjs9qp8938hl7j6rrgd17"; + version = "3.7.2"; + sha256 = "0i0ycgwdxja8313hlkrlwrl85a4ykkyqddgg484jkr4rnr7ylk8w"; platforms = lib.platforms.linux; } diff --git a/third_party/nixpkgs/pkgs/tools/games/amidst/default.nix b/third_party/nixpkgs/pkgs/tools/games/amidst/default.nix index 886ba3752a..8ec65a1dd3 100644 --- a/third_party/nixpkgs/pkgs/tools/games/amidst/default.nix +++ b/third_party/nixpkgs/pkgs/tools/games/amidst/default.nix @@ -2,25 +2,25 @@ , stdenv , fetchurl , makeWrapper -, jre8 }: # TODO: Update this to the latest version of java upon the next release. This is currently not done because of https://github.com/toolbox4minecraft/amidst/issues/960 +, jre }: stdenv.mkDerivation rec { pname = "amidst"; - version = "4.6"; + version = "4.7"; src = fetchurl { # TODO: Compile from src url = "https://github.com/toolbox4minecraft/amidst/releases/download/v${version}/amidst-v${lib.replaceStrings [ "." ] [ "-" ] version}.jar"; - sha256 = "0nz6xfhshy36j8k81kqdfbbxih96l7f3s9156f9lmw0mi1qlyzqk"; + sha256 = "sha256-oecRjD7JUuvFym8N/hSE5cbAFQojS6yxOuxpwWRlW9M="; }; dontUnpack = true; - nativeBuildInputs = [ jre8 makeWrapper ]; + nativeBuildInputs = [ jre makeWrapper ]; installPhase = '' mkdir -p $out/{bin,lib/amidst} cp $src $out/lib/amidst/amidst.jar - makeWrapper ${jre8}/bin/java $out/bin/amidst \ + makeWrapper ${jre}/bin/java $out/bin/amidst \ --add-flags "-jar $out/lib/amidst/amidst.jar" ''; diff --git a/third_party/nixpkgs/pkgs/tools/games/joystickwake/default.nix b/third_party/nixpkgs/pkgs/tools/games/joystickwake/default.nix new file mode 100644 index 0000000000..01800aff84 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/games/joystickwake/default.nix @@ -0,0 +1,26 @@ +{ lib, python3, fetchFromGitHub }: +python3.pkgs.buildPythonApplication rec { + pname = "joystickwake"; + version = "0.2.4"; + + src = fetchFromGitHub { + owner = "foresto"; + repo = pname; + rev = "v${version}"; + sha256 = "0j8xwfmzzmc9s88zvzc3lv67821r6x28vy6vli3srvx859wprppd"; + }; + + propagatedBuildInputs = with python3.pkgs; [ pyudev xlib ]; + + meta = with lib; { + description = "A joystick-aware screen waker"; + longDescription = '' + Linux gamers often find themselves unexpectedly staring at a blank screen, because their display server fails to recognize game controllers as input devices, allowing the screen blanker to activate during gameplay. + This program works around the problem by temporarily disabling screen blankers when joystick activity is detected. + ''; + homepage = "https://github.com/foresto/joystickwake"; + maintainers = with maintainers; [ bertof ]; + license = licenses.mit; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/graphics/appleseed/default.nix b/third_party/nixpkgs/pkgs/tools/graphics/appleseed/default.nix index a0d659efb3..1436aacad0 100644 --- a/third_party/nixpkgs/pkgs/tools/graphics/appleseed/default.nix +++ b/third_party/nixpkgs/pkgs/tools/graphics/appleseed/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchFromGitHub, cmake, boost165, pkg-config, guile, eigen, libpng, python, libGLU, qt4, openexr, openimageio, -opencolorio, xercesc, ilmbase, osl, seexpr, makeWrapper +opencolorio_1, xercesc, ilmbase, osl, seexpr, makeWrapper }: let boost_static = boost165.override { @@ -21,7 +21,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ cmake pkg-config makeWrapper ]; buildInputs = [ boost_static guile eigen libpng python - libGLU qt4 openexr openimageio opencolorio xercesc + libGLU qt4 openexr openimageio opencolorio_1 xercesc osl seexpr ]; diff --git a/third_party/nixpkgs/pkgs/tools/graphics/eplot/default.nix b/third_party/nixpkgs/pkgs/tools/graphics/eplot/default.nix index b4dd9cd36d..2e69bc8a26 100644 --- a/third_party/nixpkgs/pkgs/tools/graphics/eplot/default.nix +++ b/third_party/nixpkgs/pkgs/tools/graphics/eplot/default.nix @@ -1,7 +1,8 @@ { lib, stdenv, fetchurl, gnuplot, ruby }: stdenv.mkDerivation { - name = "eplot-2.07"; + pname = "eplot"; + version = "2.09"; # Upstream has been contacted (2015-03) regarding providing versioned # download URLs. Initial response was positive, but no action yet. @@ -20,12 +21,16 @@ stdenv.mkDerivation { dontUnpack = true; installPhase = '' + runHook preInstall + mkdir -p "$out/bin" cp "$src" "$out/bin/eplot" cp "$ecSrc" "$out/bin/ec" chmod +x "$out/bin/"* sed -i -e "s|gnuplot -persist|${gnuplot}/bin/gnuplot -persist|" "$out/bin/eplot" + + runHook postInstall ''; meta = with lib; { @@ -39,9 +44,9 @@ stdenv.mkDerivation { This package also includes the complementary 'ec' tool (say "extract column"). ''; - homepage = "http://liris.cnrs.fr/christian.wolf/software/eplot/"; + homepage = "https://perso.liris.cnrs.fr/christian.wolf/software/eplot/"; license = licenses.gpl2Plus; platforms = platforms.all; - maintainers = [ maintainers.bjornfor ]; + maintainers = with maintainers; [ bjornfor shamilton ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/graphics/glmark2/default.nix b/third_party/nixpkgs/pkgs/tools/graphics/glmark2/default.nix index 806b03061c..6429448125 100644 --- a/third_party/nixpkgs/pkgs/tools/graphics/glmark2/default.nix +++ b/third_party/nixpkgs/pkgs/tools/graphics/glmark2/default.nix @@ -1,23 +1,55 @@ -{ lib, stdenv, fetchFromGitHub, pkg-config, libjpeg, libpng, xorg, libX11, libGL, libdrm, - python27, wayland, udev, mesa, wafHook }: +{ lib +, stdenv +, fetchFromGitHub +, pkg-config +, makeWrapper +, libjpeg +, libpng +, xorg +, libX11 +, libGL +, libdrm +, udev +, python3 +, wayland +, wayland-protocols +, mesa +, wafHook +}: -stdenv.mkDerivation { +stdenv.mkDerivation rec { pname = "glmark2"; - version = "2017-09-01"; + version = "2021.02"; src = fetchFromGitHub { owner = "glmark2"; repo = "glmark2"; - rev = "7265e8e6c77c4f60302507eca0e18560b1117a86"; - sha256 = "076l75rfl6pnp1wgiwlaihy1vg2advg1z8bi0x84kk259kldgvwn"; + rev = version; + sha256 = "1a75gg1dn03d3jq7n74wsw7kc14ildbb8azzbj4k28xik1m6khr9"; }; - nativeBuildInputs = [ pkg-config wafHook ]; + nativeBuildInputs = [ pkg-config wafHook makeWrapper ]; buildInputs = [ - libjpeg libpng xorg.libxcb libX11 libGL libdrm python27 wayland udev mesa + libjpeg + libpng + xorg.libxcb + libX11 + libdrm + python3 + udev + wayland + wayland-protocols + mesa ]; - wafConfigureFlags = ["--with-flavors=x11-gl,x11-glesv2,drm-gl,drm-glesv2,wayland-gl,wayland-glesv2"]; + wafConfigureFlags = [ "--with-flavors=x11-gl,x11-glesv2,drm-gl,drm-glesv2,wayland-gl,wayland-glesv2" ]; + + postInstall = '' + for binary in $out/bin/glmark2*; do + wrapProgram $binary \ + --set LD_LIBRARY_PATH ${libGL}/lib + done + ''; meta = with lib; { description = "OpenGL (ES) 2.0 benchmark"; diff --git a/third_party/nixpkgs/pkgs/tools/graphics/gnuplot/default.nix b/third_party/nixpkgs/pkgs/tools/graphics/gnuplot/default.nix index 2ad99c727d..b46fd88ab9 100644 --- a/third_party/nixpkgs/pkgs/tools/graphics/gnuplot/default.nix +++ b/third_party/nixpkgs/pkgs/tools/graphics/gnuplot/default.nix @@ -20,11 +20,11 @@ let in (if withQt then mkDerivation else stdenv.mkDerivation) rec { pname = "gnuplot"; - version = "5.4.1"; + version = "5.4.2"; src = fetchurl { url = "mirror://sourceforge/gnuplot/${pname}-${version}.tar.gz"; - sha256 = "03jrqs5lvxmbbz2c4g17dn2hrxqwd3hfadk9q8wbkbkyas2h8sbb"; + sha256 = "sha256-5Xx14TGBM5UdMqg7zcSv8X/tKHIsTnHyMFz8KuHK57o="; }; nativeBuildInputs = [ makeWrapper pkg-config texinfo ] ++ lib.optional withQt qttools; diff --git a/third_party/nixpkgs/pkgs/tools/graphics/goverlay/default.nix b/third_party/nixpkgs/pkgs/tools/graphics/goverlay/default.nix new file mode 100644 index 0000000000..43d711588f --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/graphics/goverlay/default.nix @@ -0,0 +1,108 @@ +{ lib +, writeScriptBin +, bash +, stdenv +, fetchFromGitHub +, fpc +, lazarus-qt +, qt5 +, libX11 +, libqt5pas +, coreutils +, git +, gnugrep +, libnotify +, mesa-demos +, polkit +, procps +, systemd +, vulkan-tools +, which +}: + +let + # Finds data files using the XDG Base Directory Specification + # See https://specifications.freedesktop.org/basedir-spec/basedir-spec-latest.html + find-xdg-data-files = writeScriptBin "find-xdg-data-files" '' + #!${bash}/bin/sh + IFS=: + for xdg_data_dir in ''${XDG_DATA_HOME:-$HOME/.local/share}:''${XDG_DATA_DIRS:-/usr/local/share:/usr/share}; do + if [ -f "$xdg_data_dir/$1" ]; then + echo "$xdg_data_dir/$1" + fi + done + ''; +in stdenv.mkDerivation rec { + pname = "goverlay"; + version = "0.5.1"; + + src = fetchFromGitHub { + owner = "benjamimgois"; + repo = pname; + rev = version; + hash = "sha256-Zl1pq2MeGJsPdNlwUEpov5MHlsr9pSMkWHVprt8ImKs="; + }; + + outputs = [ "out" "man" ]; + + patches = [ + # Find MangoHud & vkBasalt Vulkan layers using the XDG Base Directory Specification + ./find-xdg-data-files.patch + ]; + + postPatch = '' + substituteInPlace Makefile \ + --replace 'prefix = /usr/local' "prefix = $out" + + substituteInPlace overlayunit.pas \ + --replace '/usr/share/icons/hicolor/128x128/apps/goverlay.png' "$out/share/icons/hicolor/128x128/apps/goverlay.png" + ''; + + nativeBuildInputs = [ + fpc + lazarus-qt + qt5.wrapQtAppsHook + ]; + + buildInputs = [ + libX11 + libqt5pas + ]; + + NIX_LDFLAGS = "--as-needed -rpath ${lib.makeLibraryPath buildInputs}"; + + buildPhase = '' + runHook preBuild + HOME=$(mktemp -d) lazbuild --lazarusdir=${lazarus-qt}/share/lazarus -B goverlay.lpi + runHook postBuild + ''; + + qtWrapperArgs = [ + "--prefix PATH : ${lib.makeBinPath [ + bash + coreutils + find-xdg-data-files + git + gnugrep + libnotify + mesa-demos + polkit + procps + systemd + vulkan-tools + which + ]}" + + # Force xcb since libqt5pas doesn't support Wayland + # See https://github.com/benjamimgois/goverlay/issues/107 + "--set QT_QPA_PLATFORM xcb" + ]; + + meta = with lib; { + description = "An opensource project that aims to create a Graphical UI to help manage Linux overlays"; + homepage = "https://github.com/benjamimgois/goverlay"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ kira-bruneau ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/graphics/goverlay/find-xdg-data-files.patch b/third_party/nixpkgs/pkgs/tools/graphics/goverlay/find-xdg-data-files.patch new file mode 100644 index 0000000000..862e4c3903 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/graphics/goverlay/find-xdg-data-files.patch @@ -0,0 +1,40 @@ +diff --git a/overlayunit.pas b/overlayunit.pas +index 59f6a81..a096543 100644 +--- a/overlayunit.pas ++++ b/overlayunit.pas +@@ -4871,7 +4871,7 @@ begin + //Determine Mangohud dependency status + + //locate MangoHud and store result in tmp folder +- RunCommand('bash -c ''find /usr/share/vulkan/implicit_layer.d/MangoHud.json >> /tmp/goverlay/dependency_mangohud''', s); ++ RunCommand('bash -c ''find-xdg-data-files vulkan/implicit_layer.d/MangoHud.json >> /tmp/goverlay/dependency_mangohud''', s); + + // Assign Text file dependency_mangohud to variable mangohudVAR + AssignFile(mangohudVAR, '/tmp/goverlay/dependency_mangohud'); +@@ -4880,7 +4880,7 @@ begin + CloseFile(mangohudVAR); + + // Read String and store value on mangohuddependencyVALUE based on result +- if mangohudSTR = '/usr/share/vulkan/implicit_layer.d/MangoHud.json' then ++ if mangohudSTR <> '' then + mangohuddependencyVALUE := 1 + else + mangohuddependencyVALUE := 0; +@@ -4889,7 +4889,7 @@ begin + //Determine vkBasalt dependency staus + + //locate vkBasalt and store result in tmp folder +- RunCommand('bash -c ''find /usr/share/vulkan/implicit_layer.d/vkBasalt.json >> /tmp/goverlay/dependency_vkbasalt''', s); ++ RunCommand('bash -c ''find-xdg-data-files vulkan/implicit_layer.d/vkBasalt.json >> /tmp/goverlay/dependency_vkbasalt''', s); + + // Assign Text file dependency_mangohud to variable mangohudVAR + AssignFile(vkbasaltVAR, '/tmp/goverlay/dependency_vkbasalt'); +@@ -4898,7 +4898,7 @@ begin + CloseFile(vkbasaltVAR); + + // Read String and store value on vkbasaltdependencyVALUE based on result +- if vkbasaltSTR = '/usr/share/vulkan/implicit_layer.d/vkBasalt.json' then ++ if vkbasaltSTR <> '' then + vkbasaltdependencyVALUE := 1 + else + vkbasaltdependencyVALUE := 0; diff --git a/third_party/nixpkgs/pkgs/tools/graphics/graphviz/base.nix b/third_party/nixpkgs/pkgs/tools/graphics/graphviz/base.nix index 000e2b2808..1a387042b2 100644 --- a/third_party/nixpkgs/pkgs/tools/graphics/graphviz/base.nix +++ b/third_party/nixpkgs/pkgs/tools/graphics/graphviz/base.nix @@ -21,7 +21,14 @@ let buildCommand = "sed s/dot_root/agroot/g ${raw_patch} > $out"; }; # 2.42 has the patch included - patches = optional (lib.versionOlder version "2.42") patchToUse; + patches = optional (lib.versionOlder version "2.42") patchToUse + ++ optionals (lib.versionOlder version "2.46.0") [ + (fetchpatch { + name = "CVE-2020-18032.patch"; + url = "https://gitlab.com/graphviz/graphviz/-/commit/784411ca3655c80da0f6025ab20634b2a6ff696b.patch"; + sha256 = "1nkw9ism8lkfvxsp5fh95i2l5s5cbjsidbb3g1kjfv10rxkyb41m"; + }) + ]; in stdenv.mkDerivation { diff --git a/third_party/nixpkgs/pkgs/tools/graphics/maim/default.nix b/third_party/nixpkgs/pkgs/tools/graphics/maim/default.nix index 6cfa77c8ce..f4851c6bca 100644 --- a/third_party/nixpkgs/pkgs/tools/graphics/maim/default.nix +++ b/third_party/nixpkgs/pkgs/tools/graphics/maim/default.nix @@ -1,22 +1,21 @@ { lib, stdenv, fetchFromGitHub, cmake, pkg-config -, zlib, libpng, libjpeg, libGLU, libGL, glm +, zlib, libpng, libjpeg, libwebp, libGLU, libGL, glm , libX11, libXext, libXfixes, libXrandr, libXcomposite, slop, icu }: stdenv.mkDerivation rec { pname = "maim"; - version = "5.6.3"; + version = "5.7.4"; src = fetchFromGitHub { owner = "naelstrof"; repo = "maim"; rev = "v${version}"; - sha256 = "181mjjrjb9fs1ficcv9miqbk94v95j1yli7fjp2dj514g7nj9l3x"; + sha256 = "sha256-uFtiwaM3H09vfvz3wVvumbqkoZhLNJxONkMqqqrJBs4="; }; nativeBuildInputs = [ cmake pkg-config ]; - buildInputs = - [ zlib libpng libjpeg libGLU libGL glm + buildInputs = [ zlib libpng libjpeg libwebp libGLU libGL glm libX11 libXext libXfixes libXrandr libXcomposite slop icu ]; doCheck = false; @@ -32,6 +31,6 @@ stdenv.mkDerivation rec { changelog = "https://github.com/naelstrof/maim/releases/tag/v${version}"; platforms = lib.platforms.all; license = lib.licenses.gpl3Plus; - maintainers = with maintainers; [ primeos mbakke ]; + maintainers = with maintainers; [ ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/graphics/mangohud/default.nix b/third_party/nixpkgs/pkgs/tools/graphics/mangohud/default.nix index 91022eff31..888a9a1e3a 100644 --- a/third_party/nixpkgs/pkgs/tools/graphics/mangohud/default.nix +++ b/third_party/nixpkgs/pkgs/tools/graphics/mangohud/default.nix @@ -1,7 +1,7 @@ { lib , stdenv , fetchFromGitHub -, fetchpatch +, fetchurl , substituteAll , coreutils , curl @@ -9,7 +9,7 @@ , glxinfo , gnugrep , gnused -, pciutils +, lsof , xdg-utils , dbus , hwdata @@ -22,30 +22,50 @@ , ninja , pkg-config , python3Packages +, unzip , vulkan-loader , libXNVCtrl +, wayland +, addOpenGLRunpath }: -stdenv.mkDerivation rec { +let + # Derived from subprojects/imgui.wrap + imgui = rec { + version = "1.81"; + src = fetchFromGitHub { + owner = "ocornut"; + repo = "imgui"; + rev = "v${version}"; + hash = "sha256-rRkayXk3xz758v6vlMSaUu5fui6NR8Md3njhDB0gJ18="; + }; + patch = fetchurl { + url = "https://wrapdb.mesonbuild.com/v2/imgui_${version}-1/get_patch"; + hash = "sha256-bQC0QmkLalxdj4mDEdqvvOFtNwz2T1MpTDuMXGYeQ18="; + }; + }; +in stdenv.mkDerivation rec { pname = "mangohud"; - version = "0.6.1"; + version = "0.6.4"; src = fetchFromGitHub { owner = "flightlessmango"; repo = "MangoHud"; rev = "v${version}"; - sha256 = "1bzfp37qrx9kk5zaq7sfisgkyccwnxd7i3b1l0blfcy2lrxgx0n6"; fetchSubmodules = true; + sha256 = "S7FtO/VLZp6Al13i6IrEbIzsgP3kZ3VSNBLhwReZLqM="; }; - patches = [ - # Adds option to specify Vulkan's datadir when it's not the same as MangoHud's - # See https://github.com/flightlessmango/MangoHud/pull/522 - (fetchpatch { - url = "https://github.com/flightlessmango/MangoHud/commit/56682985d8cec711af7ad0841888a44099249b1b.patch"; - sha256 = "0l5vb374lfgfh54jiy4097bzsccpv4zsl1fdhn55sxggklymcad8"; - }) + outputs = [ "out" "doc" "man" ]; + # Unpack subproject sources + postUnpack = ''( + cd "$sourceRoot/subprojects" + cp -R --no-preserve=mode,ownership ${imgui.src} imgui-${imgui.version} + unzip ${imgui.patch} + )''; + + patches = [ # Hard code dependencies. Can't use makeWrapper since the Vulkan # layer can be used without the mangohud executable by setting MANGOHUD=1. (substituteAll { @@ -58,7 +78,7 @@ stdenv.mkDerivation rec { glxinfo gnugrep gnused - pciutils + lsof xdg-utils ]; @@ -82,6 +102,7 @@ stdenv.mkDerivation rec { mesonFlags = [ "-Duse_system_vulkan=enabled" "-Dvulkan_datadir=${vulkan-headers}/share" + "-Dwith_wayland=enabled" ]; nativeBuildInputs = [ @@ -92,6 +113,7 @@ stdenv.mkDerivation rec { pkg-config python3Packages.Mako python3Packages.python + unzip vulkan-loader ]; @@ -99,6 +121,7 @@ stdenv.mkDerivation rec { dbus libX11 libXNVCtrl + wayland ]; # Support 32bit Vulkan applications by linking in 32bit Vulkan layer @@ -108,11 +131,12 @@ stdenv.mkDerivation rec { "$out/share/vulkan/implicit_layer.d/MangoHud.x86.json" ''; - # Support overlaying Vulkan applications without requiring mangohud to be installed + # Support Nvidia cards by adding OpenGL path and support overlaying + # Vulkan applications without requiring MangoHud to be installed postFixup = '' wrapProgram "$out/bin/mangohud" \ - --prefix VK_LAYER_PATH : "$out/share/vulkan/implicit_layer.d" \ - --prefix VK_INSTANCE_LAYERS : VK_LAYER_MANGOHUD_overlay + --prefix LD_LIBRARY_PATH : ${lib.makeLibraryPath [ addOpenGLRunpath.driverLink ]} \ + --prefix XDG_DATA_DIRS : "$out/share" ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/tools/graphics/mangohud/hardcode-dependencies.patch b/third_party/nixpkgs/pkgs/tools/graphics/mangohud/hardcode-dependencies.patch index bdebcdca98..2ee5e2dd54 100644 --- a/third_party/nixpkgs/pkgs/tools/graphics/mangohud/hardcode-dependencies.patch +++ b/third_party/nixpkgs/pkgs/tools/graphics/mangohud/hardcode-dependencies.patch @@ -1,9 +1,9 @@ diff --git a/src/dbus.cpp b/src/dbus.cpp -index 0acccc3..7dd7c49 100644 +index 44ffafc..9baf57b 100644 --- a/src/dbus.cpp +++ b/src/dbus.cpp -@@ -157,7 +157,7 @@ bool dbus_manager::init(const std::string& requested_player) { - m_requested_player = "org.mpris.MediaPlayer2." + requested_player; +@@ -162,7 +162,7 @@ bool dbus_manager::init(const std::string& requested_player) { + return true; } - if (!m_dbus_ldr.IsLoaded() && !m_dbus_ldr.Load("libdbus-1.so.3")) { @@ -22,11 +22,11 @@ index 25c65bf..87488d5 100644 -std::shared_ptr g_x11(new libx11_loader("libX11.so.6")); +std::shared_ptr g_x11(new libx11_loader("@libX11@/lib/libX11.so.6")); diff --git a/src/logging.cpp b/src/logging.cpp -index f2c4271..d33e793 100644 +index ee8600b..c7c91a0 100644 --- a/src/logging.cpp +++ b/src/logging.cpp -@@ -17,7 +17,10 @@ string exec(string command) { - string result = ""; +@@ -19,7 +19,10 @@ string exec(string command) { + #ifdef __gnu_linux__ // Open pipe to file + char* originalPath = getenv("PATH"); diff --git a/third_party/nixpkgs/pkgs/tools/graphics/mangohud/opengl32-nix-workaround.patch b/third_party/nixpkgs/pkgs/tools/graphics/mangohud/opengl32-nix-workaround.patch index 3c0f690861..4c6561180a 100644 --- a/third_party/nixpkgs/pkgs/tools/graphics/mangohud/opengl32-nix-workaround.patch +++ b/third_party/nixpkgs/pkgs/tools/graphics/mangohud/opengl32-nix-workaround.patch @@ -1,5 +1,5 @@ diff --git a/bin/mangohud.in b/bin/mangohud.in -index eadce2d..e7b1aa4 100755 +index 8ec21de..f65304a 100755 --- a/bin/mangohud.in +++ b/bin/mangohud.in @@ -23,6 +23,6 @@ fi diff --git a/third_party/nixpkgs/pkgs/tools/graphics/mesa-demos/default.nix b/third_party/nixpkgs/pkgs/tools/graphics/mesa-demos/default.nix index 14b7a038a1..550b06d0f0 100644 --- a/third_party/nixpkgs/pkgs/tools/graphics/mesa-demos/default.nix +++ b/third_party/nixpkgs/pkgs/tools/graphics/mesa-demos/default.nix @@ -12,6 +12,7 @@ stdenv.mkDerivation rec { buildInputs = [ freeglut glew libX11 libXext libGL libGLU mesa mesa.osmesa wayland ]; nativeBuildInputs = [ pkg-config ]; + configureFlags = [ "--with-system-data-files" ]; enableParallelBuilding = true; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/tools/inputmethods/fcitx5/fcitx5-chinese-addons.nix b/third_party/nixpkgs/pkgs/tools/inputmethods/fcitx5/fcitx5-chinese-addons.nix index 6d3952c9c2..3a4a38c6b7 100644 --- a/third_party/nixpkgs/pkgs/tools/inputmethods/fcitx5/fcitx5-chinese-addons.nix +++ b/third_party/nixpkgs/pkgs/tools/inputmethods/fcitx5/fcitx5-chinese-addons.nix @@ -31,13 +31,13 @@ in mkDerivation rec { pname = "fcitx5-chinese-addons"; - version = "5.0.3"; + version = "5.0.6"; src = fetchFromGitHub { owner = "fcitx"; repo = "fcitx5-chinese-addons"; rev = version; - sha256 = "sha256-kCihpRUtUXrqqf7FPQp8ZRexiygOuDVOdQwVx7tSn+c="; + sha256 = "sha256-+DhXFqUxECGZYHAmEw5cZJQnRHHgvT0nVVqY9DXgWBU="; }; cmakeFlags = [ diff --git a/third_party/nixpkgs/pkgs/tools/inputmethods/fcitx5/update.py b/third_party/nixpkgs/pkgs/tools/inputmethods/fcitx5/update.py index e3513c747f..9f54e313fd 100755 --- a/third_party/nixpkgs/pkgs/tools/inputmethods/fcitx5/update.py +++ b/third_party/nixpkgs/pkgs/tools/inputmethods/fcitx5/update.py @@ -1,5 +1,5 @@ #!/usr/bin/env nix-shell -#!nix-shell -i python3 -p nix-prefetch-github python3Packages.requests +#!nix-shell -i python3 -p nix-update nix-prefetch-github python3Packages.requests from nix_prefetch_github import * import json @@ -12,8 +12,7 @@ REPOS = [ "libime", "xcb-imdkit", "fcitx5", "fcitx5-gtk", "fcitx5-qt", "fcitx5-c OWNER = "fcitx" def get_latest_tag(repo, owner=OWNER): - r = requests.get( 'https://api.github.com/repos/{}/{}/tags'.format(owner,repo) - , auth=('poscat', 'db5e6fd16d0eb8c36385d3d944e058a1178b4265')) + r = requests.get('https://api.github.com/repos/{}/{}/tags'.format(owner,repo)) return r.json()[0].get("name") def main(): diff --git a/third_party/nixpkgs/pkgs/tools/inputmethods/hime/default.nix b/third_party/nixpkgs/pkgs/tools/inputmethods/hime/default.nix index 988f8941d1..4c86fb04cf 100644 --- a/third_party/nixpkgs/pkgs/tools/inputmethods/hime/default.nix +++ b/third_party/nixpkgs/pkgs/tools/inputmethods/hime/default.nix @@ -1,27 +1,40 @@ -{ -stdenv, fetchFromGitHub, pkg-config, which, gtk2, gtk3, qt4, qt5, libXtst, lib, +{ stdenv +, fetchFromGitHub +, pkg-config +, which +, gtk2 +, gtk3 +, qt4 +, qt5 +, libXtst +, lib +, libchewing +, unixtools +, anthy }: -# chewing and anthy do not work well -# so we do not enable these input method at this moment - -stdenv.mkDerivation { - name = "hime"; - version = "unstable-2020-06-27"; +stdenv.mkDerivation rec { + pname = "hime"; + version = "0.9.11"; src = fetchFromGitHub { + repo = pname; owner = "hime-ime"; - repo = "hime"; - rev = "c89751a58836906e6916355fd037fc74fd7a7a15"; - sha256 = "024w67q0clzxigsrvqbxpiy8firjvrqi7wbkkcapzzhzapv3nm8x"; + rev = "v${version}"; + sha256 = "sha256-fCqet+foQjI+LpTQ/6Egup1GzXELlL2hgbh0dCKLwPI="; }; - nativeBuildInputs = [ which pkg-config ]; - buildInputs = [ libXtst gtk2 gtk3 qt4 qt5.qtbase ]; + nativeBuildInputs = [ which pkg-config unixtools.whereis ]; + buildInputs = [ libXtst gtk2 gtk3 qt4 qt5.qtbase libchewing anthy ]; preConfigure = "patchShebangs configure"; configureFlags = [ "--disable-lib64" "--disable-qt5-immodule" ]; dontWrapQtApps = true; + postFixup = '' + hime_rpath=$(patchelf --print-rpath $out/bin/hime) + patchelf --set-rpath $out/lib/hime:$hime_rpath $out/bin/hime + ''; + meta = with lib; { homepage = "http://hime-ime.github.io/"; diff --git a/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/caps2esc.nix b/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/caps2esc.nix index ab4242295a..933a731828 100644 --- a/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/caps2esc.nix +++ b/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/caps2esc.nix @@ -2,13 +2,14 @@ stdenv.mkDerivation rec { pname = "caps2esc"; - version = "0.1.3"; + version = "0.3.2"; src = fetchFromGitLab { - owner = "interception/linux/plugins"; + group = "interception"; + owner = "linux/plugins"; repo = pname; rev = "v${version}"; - sha256 = "10xv56vh5h3lxyii3ni166ddv1sz2pylrjmdwxhb4gd2p5zgl1ji"; + sha256 = "sha256-gPFElAixiDTTwcl2XKM7MbTkpRrg8ToO5K7H8kz3DHk="; }; nativeBuildInputs = [ cmake ]; diff --git a/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/default.nix b/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/default.nix index 21636ea8d8..35b3b1e336 100644 --- a/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/default.nix +++ b/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/default.nix @@ -1,19 +1,18 @@ -{ lib, stdenv, fetchurl, pkg-config, cmake, libyamlcpp, - libevdev, udev }: +{ lib, stdenv, fetchFromGitLab, pkg-config, cmake, libyamlcpp, + libevdev, udev, boost }: -let - version = "0.2.1"; - baseName = "interception-tools"; -in stdenv.mkDerivation { - name = "${baseName}-${version}"; - - src = fetchurl { - url = "https://gitlab.com/interception/linux/tools/repository/v${version}/archive.tar.gz"; - sha256 = "0lqz89wsf9r5xdgflincysxg4l8fpgg5z8zczhhrg9s5787srfzi"; +stdenv.mkDerivation rec { + pname = "interception-tools"; + version = "0.6.6"; + src = fetchFromGitLab { + owner = "interception/linux"; + repo = "tools"; + rev = "v${version}"; + sha256 = "0k9h14a9d65nwvv7pj0kigjgzfv453mm3r4svnxfg1h5lccmy8jj"; }; nativeBuildInputs = [ cmake pkg-config ]; - buildInputs = [ libevdev udev libyamlcpp ]; + buildInputs = [ libevdev udev libyamlcpp boost ]; prePatch = '' substituteInPlace CMakeLists.txt --replace \ @@ -21,12 +20,10 @@ in stdenv.mkDerivation { "\"$(pkg-config --cflags libevdev | cut -c 3-)\"" ''; - patches = [ ./fix-udevmon-configuration-job-path.patch ]; - meta = { description = "A minimal composable infrastructure on top of libudev and libevdev"; homepage = "https://gitlab.com/interception/linux/tools"; - license = lib.licenses.gpl3; + license = lib.licenses.gpl3Only; maintainers = [ lib.maintainers.vyp ]; platforms = lib.platforms.linux; }; diff --git a/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/dual-function-keys.nix b/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/dual-function-keys.nix index 730135e4a7..9824a46d43 100644 --- a/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/dual-function-keys.nix +++ b/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/dual-function-keys.nix @@ -2,16 +2,18 @@ stdenv.mkDerivation rec { pname = "dual-function-keys"; - version = "1.1.0"; + version = "1.4.0"; src = fetchFromGitLab { - owner = "interception/linux/plugins"; + group = "interception"; + owner = "linux/plugins"; repo = pname; rev = version; - sha256 = "07hksca4g7v4zsvhmhc9j725j3n63fzrkx9sb4a0wrd7rwgr25rz"; + sha256 = "sha256-xlplbkeptXMBlRnSsc5NgGJfT8aoZxTRgTwTOd7aiWg="; }; nativeBuildInputs = [ pkg-config ]; + buildInputs = [ libevdev libyamlcpp ]; prePatch = '' diff --git a/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/fix-udevmon-configuration-job-path.patch b/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/fix-udevmon-configuration-job-path.patch deleted file mode 100644 index 469c96647d..0000000000 --- a/third_party/nixpkgs/pkgs/tools/inputmethods/interception-tools/fix-udevmon-configuration-job-path.patch +++ /dev/null @@ -1,32 +0,0 @@ -From d3a5d661b80f3597368f517ebaeddfdfaafc1bf2 Mon Sep 17 00:00:00 2001 -From: xd1le -Date: Mon, 28 Aug 2017 00:19:09 +1000 -Subject: [PATCH] fix udevmon configuration job path - -For some reason, the udevmon job $PATH seems to be empty (or otherwise -seems to point to `/no-such-path`). This commit fixes that by setting -its $PATH to the same $PATH that the parent udevmon process has. ---- - udevmon.cpp | 5 ++++- - 1 file changed, 4 insertions(+), 1 deletion(-) - -diff --git a/udevmon.cpp b/udevmon.cpp -index ebdd909..b523efd 100644 ---- a/udevmon.cpp -+++ b/udevmon.cpp -@@ -237,8 +237,11 @@ private: - case 0: { - char *command[] = {(char *)"sh", (char *)"-c", - (char *)job.c_str(), nullptr}; -+ std::string path = getenv("PATH"); - std::string variables = "DEVNODE=" + devnode; -- char *environment[] = {(char *)variables.c_str(), nullptr}; -+ std::string pathenv = "PATH=" + path; -+ char *environment[] = {(char *)variables.c_str(), -+ (char *)pathenv.c_str(), nullptr}; - execvpe(command[0], command, environment); - std::fprintf(stderr, - R"(exec failed for devnode %s, job "%s" )" --- -2.14.1 - diff --git a/third_party/nixpkgs/pkgs/tools/misc/asdf-vm/default.nix b/third_party/nixpkgs/pkgs/tools/misc/asdf-vm/default.nix new file mode 100644 index 0000000000..1ba5c750f3 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/asdf-vm/default.nix @@ -0,0 +1,85 @@ +{ stdenv, lib, fetchFromGitHub, makeWrapper, installShellFiles, bash, coreutils, curl, git, writeScript }: + +let + asdfReshimFile = writeScript "asdf-reshim" '' +#!/usr/bin/env bash + +# asdf-vm create "shim" file like this: +# +# exec $ASDF_DIR/bin/asdf exec "node" "$@" +# +# So we should reshim all installed versions every time shell initialized, +# because $out always change + +asdfDir="''${ASDF_DIR:-$HOME/.asdf}" +asdfDataDir="''${ASDF_DATA_DIR:-$HOME/.asdf}" + +prevAsdfDirFilePath="$asdfDataDir/.nix-prev-asdf-dir-path" + +if [ -r "$prevAsdfDirFilePath" ]; then + prevAsdfDir="$(cat "$prevAsdfDirFilePath")" +else + prevAsdfDir="" +fi + +if [ "$prevAsdfDir" != "$asdfDir" ]; then + rm -rf "$asdfDataDir"/shims + "$asdfDir"/bin/asdf reshim + echo "$asdfDir" > "$prevAsdfDirFilePath" +fi + ''; + + asdfPrepareFile = writeScript "asdf-prepare" '' +ASDF_DIR="@asdfDir@" + +source "$ASDF_DIR/asdf.sh" +${asdfReshimFile} + ''; +in stdenv.mkDerivation rec { + pname = "asdf-vm"; + version = "0.8.1"; + + src = fetchFromGitHub { + owner = "asdf-vm"; + repo = "asdf"; + rev = "v${version}"; + sha256 = "07lh5k1krzm7fbkv0jlwbzz5ycn2jg7s12dnqwmy82qqic0sl6fl"; + }; + + nativeBuildInputs = [ + makeWrapper + installShellFiles + ]; + + buildInputs = [ + bash + curl + git + ]; + + installPhase = '' + mkdir -p $out/share/asdf-vm + cp -r . $out/share/asdf-vm + + mkdir -p $out/etc/profile.d + substitute ${asdfPrepareFile} $out/etc/profile.d/asdf-prepare.sh \ + --replace "@asdfDir@" "$out/share/asdf-vm" + + mkdir -p $out/bin + makeWrapper $out/share/asdf-vm/bin/asdf $out/bin/asdf \ + --set ASDF_DIR $out/share/asdf-vm + + installShellCompletion --cmd asdf \ + --zsh completions/_asdf \ + --fish completions/asdf.fish \ + --bash completions/asdf.bash + ''; + + meta = with lib; { + description = "Extendable version manager with support for Ruby, Node.js, Erlang & more"; + homepage = "https://asdf-vm.com/"; + license = licenses.mit; + maintainers = [ maintainers.c4605 ]; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/beats/default.nix b/third_party/nixpkgs/pkgs/tools/misc/beats/default.nix new file mode 100644 index 0000000000..1e6f155f35 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/beats/default.nix @@ -0,0 +1,23 @@ +{ lib, stdenv, fetchFromGitHub }: + +stdenv.mkDerivation rec { + pname = "beats"; + version = "1.0"; + + src = fetchFromGitHub { + owner = "j0hax"; + repo = "beats"; + rev = "v${version}"; + sha256 = "0qs5cmbncqhs11m4whqmrh2gvv3p3b37qz57xh78x2ma8jbhskqz"; + }; + + makeFlags = [ "PREFIX=$(out)" ]; + + meta = with lib; { + homepage = "https://github.com/j0hax/beats"; + license = licenses.gpl3Only; + description = "Swatch Internet Time implemented as a C program"; + platforms = platforms.all; + maintainers = [ maintainers.j0hax ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/birdfont/default.nix b/third_party/nixpkgs/pkgs/tools/misc/birdfont/default.nix index 1b1fefc0a7..57b42952c8 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/birdfont/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/birdfont/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, fetchurl, pkg-config, python3, xmlbird, -cairo, gdk-pixbuf, libgee, glib, gtk3, webkitgtk, libnotify, sqlite, vala_0_44, +cairo, gdk-pixbuf, libgee, glib, gtk3, webkitgtk, libnotify, sqlite, vala, gobject-introspection, gsettings-desktop-schemas, wrapGAppsHook }: stdenv.mkDerivation rec { @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { sha256 = "sha256-caNY6PrsqBrYwC61MxNsf8B9E8it1Ls1d+hdbf8u+o8="; }; - nativeBuildInputs = [ python3 pkg-config vala_0_44 gobject-introspection wrapGAppsHook ]; + nativeBuildInputs = [ python3 pkg-config vala gobject-introspection wrapGAppsHook ]; buildInputs = [ xmlbird libgee cairo gdk-pixbuf glib gtk3 webkitgtk libnotify sqlite gsettings-desktop-schemas ]; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/tools/misc/brltty/default.nix b/third_party/nixpkgs/pkgs/tools/misc/brltty/default.nix index c3bdbca7a5..fef13a8937 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/brltty/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/brltty/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, pkg-config, python3, bluez , tcl, acl, kmod, coreutils, shadow, util-linux, udev -, alsaSupport ? stdenv.isLinux, alsaLib +, alsaSupport ? stdenv.isLinux, alsa-lib , systemdSupport ? stdenv.isLinux, systemd }: @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config python3.pkgs.cython tcl ]; buildInputs = [ bluez ] - ++ lib.optional alsaSupport alsaLib + ++ lib.optional alsaSupport alsa-lib ++ lib.optional systemdSupport systemd; meta = { diff --git a/third_party/nixpkgs/pkgs/tools/misc/broot/default.nix b/third_party/nixpkgs/pkgs/tools/misc/broot/default.nix index 0aeef02f32..d1f9ca80f7 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/broot/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/broot/default.nix @@ -14,14 +14,14 @@ rustPlatform.buildRustPackage rec { pname = "broot"; - version = "1.4.0"; + version = "1.6.0"; src = fetchCrate { inherit pname version; - sha256 = "sha256-6UveXa0rMWt5FbmhB0CsYRMGMXxL8FB/XivB4Ec93PY="; + sha256 = "sha256-H/QT/fmQI9sHjl6wMJjrfjvbOhY9VyBkAGetvcUqGrE="; }; - cargoHash = "sha256-c6U1ZOaXZ7RnKD7q0WTkam9gL8SL/naSeHGbB5I82lk="; + cargoHash = "sha256-5mqLVbB/dLAk3Ck7ilHhVn0CB/6Ln82SaTxZ/vkx+9k="; nativeBuildInputs = [ installShellFiles diff --git a/third_party/nixpkgs/pkgs/tools/misc/bunnyfetch/default.nix b/third_party/nixpkgs/pkgs/tools/misc/bunnyfetch/default.nix index 37e1be80e3..37a65d8c07 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/bunnyfetch/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/bunnyfetch/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "bunnyfetch"; - version = "unstable-2021-05-24"; + version = "unstable-2021-06-19"; src = fetchFromGitHub { - owner = "Mewyuna"; - repo = pname; - rev = "7bcc45fb590b37f410e60af893e679eb0729ecb1"; - sha256 = "1lgqrwmxdxd1d99rr0akydfwcsbcmz75fkbq9zrl842rksnp5q3r"; + owner = "Rosettea"; + repo = "bunnyfetch"; + rev = "24370338b936bae1ebdefea73e8372ac0b4d2858"; + sha256 = "09wcffx6ak4djm2lrxq43n27p9qmczng4rf11qpwx3w4w67jvpz9"; }; vendorSha256 = "1vv69y0x06kn99lw995sbkb7vgd0yb18flkr2ml8ss7q2yvz37vi"; @@ -16,11 +16,9 @@ buildGoModule rec { # No upstream tests doCheck = false; - subPackages = [ "." ]; - meta = with lib; { description = "Tiny system info fetch utility"; - homepage = "https://github.com/Mewyuna/bunnyfetch"; + homepage = "https://github.com/Rosettea/bunnyfetch"; license = licenses.mit; maintainers = with maintainers; [ devins2518 ]; platforms = platforms.linux; diff --git a/third_party/nixpkgs/pkgs/tools/misc/chafa/default.nix b/third_party/nixpkgs/pkgs/tools/misc/chafa/default.nix index d830b8d81f..041d799307 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/chafa/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/chafa/default.nix @@ -4,14 +4,14 @@ }: stdenv.mkDerivation rec { - version = "1.6.0"; + version = "1.6.1"; pname = "chafa"; src = fetchFromGitHub { owner = "hpjansson"; repo = "chafa"; rev = version; - sha256 = "sha256-GaXVMM23U3M+qNJrWYR+DLiCmILcuX5EIkQqzwN/l1Y="; + sha256 = "sha256-isQxeb7OQh4W8RvtKWXbKVYJ8LlfLiOkMJoPjsGFouM="; }; nativeBuildInputs = [ autoconf diff --git a/third_party/nixpkgs/pkgs/tools/misc/chezmoi/default.nix b/third_party/nixpkgs/pkgs/tools/misc/chezmoi/default.nix index b7a717b5b2..4d69f237a0 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/chezmoi/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/chezmoi/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "chezmoi"; - version = "2.0.13"; + version = "2.0.15"; src = fetchFromGitHub { owner = "twpayne"; repo = "chezmoi"; rev = "v${version}"; - sha256 = "sha256-ApgprU8PC5sn62D6eM1JG3s4DD2+e8SfyPpiC/6ANmQ="; + sha256 = "sha256-PUcsDyszFT4DzTwvbcCO8FQErvmotmY7gREZ2sgpcw8="; }; - vendorSha256 = "sha256-07v+JzOYtfaaL2M/z5FOWlhhaEwWwc0wui3RLynP5N8="; + vendorSha256 = "sha256-7SfqBxCfOYwePK/6SsWS5StuVr0png6WjQXIDuQW0EE="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/tools/misc/cht.sh/default.nix b/third_party/nixpkgs/pkgs/tools/misc/cht.sh/default.nix index 67249d7645..998fcf3665 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/cht.sh/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/cht.sh/default.nix @@ -10,15 +10,15 @@ stdenv.mkDerivation { pname = "cht.sh"; - version = "unstable-2021-01-31"; + version = "unstable-2021-04-25"; nativeBuildInputs = [ makeWrapper ]; src = fetchFromGitHub { owner = "chubin"; repo = "cheat.sh"; - rev = "01e579176981356fb90d4aa58fea2d6c273a45a5"; - sha256 = "0d98v67ajsc80i962myh0j4ph7bn3csk8y9jf8b5rfqd1zg737hb"; + rev = "6d83c4d76c82a87cf6df436a5ab73e3b7c819e66"; + sha256 = "dXLNPhkfbQIhFZixC674Fcegyo8+Um7E6cm56vMpCYI="; }; # Fix ".cht.sh-wrapped" in the help message diff --git a/third_party/nixpkgs/pkgs/tools/misc/clipbuzz/default.nix b/third_party/nixpkgs/pkgs/tools/misc/clipbuzz/default.nix new file mode 100644 index 0000000000..aaa37ad7c1 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/clipbuzz/default.nix @@ -0,0 +1,31 @@ +{ stdenv, lib, fetchFromSourcehut, zig, libX11, libXfixes }: + +stdenv.mkDerivation rec { + pname = "clipbuzz"; + version = "2.0.0"; + + src = fetchFromSourcehut { + owner = "~cnx"; + repo = pname; + rev = version; + sha256 = "1qn98bwp7v7blw4v0g4pckgxrky5ggvq9m0kck2kqw8jg9jc15jp"; + }; + + nativeBuildInputs = [ zig ]; + buildInputs = [ libX11 libXfixes ]; + + preBuild = '' + export HOME=$TMPDIR + ''; + + installPhase = '' + zig build -Drelease-safe -Dcpu=baseline --prefix $out install + ''; + + meta = with lib; { + description = "Buzz on new X11 clipboard events"; + homepage = "https://git.sr.ht/~cnx/clipbuzz"; + license = licenses.unlicense; + maintainers = [ maintainers.McSinyx ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/clipster/default.nix b/third_party/nixpkgs/pkgs/tools/misc/clipster/default.nix index 7da185050f..4e278b8cc6 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/clipster/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/clipster/default.nix @@ -1,4 +1,4 @@ -{fetchFromGitHub , lib, stdenv, python3, gtk3, libwnck3, +{fetchFromGitHub , lib, stdenv, python3, gtk3, libwnck, gobject-introspection, wrapGAppsHook }: stdenv.mkDerivation rec { @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { pythonEnv = python3.withPackages(ps: with ps; [ pygobject3 ]); - buildInputs = [ pythonEnv gtk3 libwnck3 gobject-introspection wrapGAppsHook ]; + buildInputs = [ pythonEnv gtk3 libwnck gobject-introspection wrapGAppsHook ]; installPhase = '' sed -i 's/python/python3/g' clipster diff --git a/third_party/nixpkgs/pkgs/tools/misc/coreboot-utils/default.nix b/third_party/nixpkgs/pkgs/tools/misc/coreboot-utils/default.nix index 39e6e6f211..95f9c74f5a 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/coreboot-utils/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/coreboot-utils/default.nix @@ -1,13 +1,13 @@ { lib, stdenv, fetchurl, zlib, pciutils, coreutils, acpica-tools, iasl, makeWrapper, gnugrep, gnused, file, buildEnv }: let - version = "4.13"; + version = "4.14"; commonMeta = with lib; { description = "Various coreboot-related tools"; homepage = "https://www.coreboot.org"; license = licenses.gpl2; - maintainers = with maintainers; [ petabyteboy felixsinger ]; + maintainers = with maintainers; [ petabyteboy felixsinger yuka ]; platforms = platforms.linux; }; @@ -16,13 +16,14 @@ let src = fetchurl { url = "https://coreboot.org/releases/coreboot-${version}.tar.xz"; - sha256 = "0sl50aajnah4a138sr3jjm3ydc8gfh5vvlhviz3ypp95b9jdlya7"; + sha256 = "0viw2x4ckjwiylb92w85k06b0g9pmamjy2yqs7fxfqbmfadkf1yr"; }; enableParallelBuilding = true; postPatch = '' cd ${path} + patchShebangs . ''; makeFlags = [ @@ -42,7 +43,7 @@ let }; cbmem = generic { pname = "cbmem"; - meta.description = "Coreboot console log reader"; + meta.description = "coreboot console log reader"; }; ifdtool = generic { pname = "ifdtool"; diff --git a/third_party/nixpkgs/pkgs/tools/misc/coreutils/default.nix b/third_party/nixpkgs/pkgs/tools/misc/coreutils/default.nix index bfe5c5c504..0b2b03ba8d 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/coreutils/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/coreutils/default.nix @@ -68,6 +68,12 @@ stdenv.mkDerivation (rec { for f in gnulib-tests/{test-chown.c,test-fchownat.c,test-lchown.c}; do echo "int main() { return 77; }" > "$f" done + + # tests try to access user 1000 which is forbidden in sandbox + sed '2i print "Skipping id uid test"; exit 77' -i ./tests/id/uid.sh + sed '2i print "Skipping id zero test"; exit 77' -i ./tests/id/zero.sh + sed '2i print "Skipping misc help-versiob test"; exit 77' -i ./tests/misc/help-version.sh + sed '2i print "Skipping chown separator test"; exit 77' -i ./tests/chown/separator.sh '' + optionalString (stdenv.hostPlatform.libc == "musl") (lib.concatStringsSep "\n" [ '' echo "int main() { return 77; }" > gnulib-tests/test-parse-datetime.c @@ -136,20 +142,15 @@ stdenv.mkDerivation (rec { meta = { homepage = "https://www.gnu.org/software/coreutils/"; description = "The basic file, shell and text manipulation utilities of the GNU operating system"; - longDescription = '' The GNU Core Utilities are the basic file, shell and text manipulation utilities of the GNU operating system. These are the core utilities which are expected to exist on every operating system. ''; - license = licenses.gpl3Plus; - platforms = platforms.unix ++ platforms.windows; - priority = 10; - maintainers = [ maintainers.eelco ]; }; } // optionalAttrs stdenv.hostPlatform.isMusl { diff --git a/third_party/nixpkgs/pkgs/tools/misc/discocss/default.nix b/third_party/nixpkgs/pkgs/tools/misc/discocss/default.nix index 2e0506bf42..f847f61575 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/discocss/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/discocss/default.nix @@ -2,23 +2,24 @@ stdenvNoCC.mkDerivation rec { pname = "discocss"; - version = "0.1.1"; + version = "0.2.0"; src = fetchFromGitHub { owner = "mlvzk"; repo = pname; rev = "v${version}"; - sha256 = "sha256-EdkcTVDFQppBeAoyM5hMMIK0d4B87JyVlmCW7zlGfDs="; + sha256 = "sha256-afmQCOOZ1MwQkbZZNHYfq2+IRv2eOtYBrGVHzDEbUHw="; }; dontBuild = true; installPhase = '' - install -m755 -D ./discocss $out/bin/discocss + install -Dm755 ./discocss $out/bin/discocss ''; meta = with lib; { description = "A tiny Discord css-injector"; + changelog = "https://github.com/mlvzk/discocss/releases/tag/v${version}"; homepage = "https://github.com/mlvzk/discocss"; license = licenses.mpl20; platforms = platforms.unix; diff --git a/third_party/nixpkgs/pkgs/tools/misc/disfetch/default.nix b/third_party/nixpkgs/pkgs/tools/misc/disfetch/default.nix index 865769dc56..d66d413fcc 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/disfetch/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/disfetch/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "disfetch"; - version = "1.22"; + version = "1.24"; src = fetchFromGitHub { owner = "llathasa-veleth"; repo = "disfetch"; rev = version; - sha256 = "sha256-fNmoaEwRrm6EFe+BwOTwAs1THMYhcal1eshXf+1mVQg="; + sha256 = "sha256-Uoc5xSyLXXEqdyYn71NK8c8A/1wQ6djYn/HHJwGg5vc="; }; dontBuild = true; diff --git a/third_party/nixpkgs/pkgs/tools/misc/dua/default.nix b/third_party/nixpkgs/pkgs/tools/misc/dua/default.nix index a7de0183b6..20288bf3f5 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/dua/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/dua/default.nix @@ -2,7 +2,7 @@ rustPlatform.buildRustPackage rec { pname = "dua"; - version = "2.12.1"; + version = "2.13.1"; buildInputs = lib.optionals stdenv.isDarwin [ libiconv ]; @@ -10,7 +10,7 @@ rustPlatform.buildRustPackage rec { owner = "Byron"; repo = "dua-cli"; rev = "v${version}"; - sha256 = "sha256-ZJCixDh2+H+G+lVgxw9H61Xy4hMg+3MbhI+e7sU4GQU="; + sha256 = "sha256-6xSRsLM1DD1xMjOGzHMDVLibrJlu9lN9OoSV7B/WMT0="; # Remove unicode file names which leads to different checksums on HFS+ # vs. other filesystems because of unicode normalisation. extraPostFetch = '' @@ -18,7 +18,7 @@ rustPlatform.buildRustPackage rec { ''; }; - cargoSha256 = "sha256-rwgvyfjCBPe20xN6gNXBexjN/BwNhZjT1RtabKhCkJs="; + cargoSha256 = "sha256-udz1EtPchEHxkvvVFnkwSOpFz4XEBGOXRz8qWREyzvc="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/tools/misc/dust/default.nix b/third_party/nixpkgs/pkgs/tools/misc/dust/default.nix index b16f990cbe..dc8dc5af97 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/dust/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/dust/default.nix @@ -2,13 +2,13 @@ rustPlatform.buildRustPackage rec { pname = "du-dust"; - version = "0.5.4"; + version = "0.6.0"; src = fetchFromGitHub { owner = "bootandy"; repo = "dust"; rev = "v${version}"; - sha256 = "1knl7kwngmq598bnlvlq9x8sqp914sv1abfm55kw9f7mja2d6pw0"; + sha256 = "sha256-15n8CpyyC41oJRrFlNHYXF5UjOyYPX93Zrq7jcU2DVM="; # Remove unicode file names which leads to different checksums on HFS+ # vs. other filesystems because of unicode normalisation. extraPostFetch = '' @@ -16,7 +16,7 @@ rustPlatform.buildRustPackage rec { ''; }; - cargoSha256 = "sha256-M/CGsjhErZe4sFs6D5ZW+TWOHVkFtXgidME/GYiM6qA="; + cargoSha256 = "sha256-rqNj3EwszSIn2cMmslO6T3K5NxQJ9u56m37TU1GwtVI="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/tools/misc/elfcat/Cargo.lock b/third_party/nixpkgs/pkgs/tools/misc/elfcat/Cargo.lock new file mode 100644 index 0000000000..e6c694bffb --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/elfcat/Cargo.lock @@ -0,0 +1,7 @@ +# This file is automatically @generated by Cargo. +# It is not intended for manual editing. +version = 3 + +[[package]] +name = "elfcat" +version = "0.1.3" diff --git a/third_party/nixpkgs/pkgs/tools/misc/elfcat/default.nix b/third_party/nixpkgs/pkgs/tools/misc/elfcat/default.nix new file mode 100644 index 0000000000..38b1cc9b64 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/elfcat/default.nix @@ -0,0 +1,22 @@ +{ lib, rustPlatform, fetchFromGitHub }: + +rustPlatform.buildRustPackage rec { + pname = "elfcat"; + version = "0.1.3"; + + src = fetchFromGitHub { + owner = "ruslashev"; + repo = pname; + rev = version; + sha256 = "sha256-s56FyRoD2IhgdwEV63jMaB265CodHUlvmrWzmXAmonY="; + }; + + cargoLock.lockFile = ./Cargo.lock; + + meta = with lib; { + description = "ELF visualizer, generates HTML files from ELF binaries."; + homepage = "https://github.com/ruslashev/elfcat"; + license = licenses.zlib; + maintainers = with maintainers; [ fortuneteller2k ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/entr/default.nix b/third_party/nixpkgs/pkgs/tools/misc/entr/default.nix index dd5d960085..abfd12523d 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/entr/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/entr/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, coreutils, ncurses }: +{ lib, stdenv, fetchurl, coreutils, ncurses, fetchpatch }: stdenv.mkDerivation rec { pname = "entr"; @@ -9,6 +9,16 @@ stdenv.mkDerivation rec { sha256 = "sha256-4lak0vvkb2EyRggzukR+ZdfzW6nQsmXnxBUDl8xEBaI="; }; + patches = lib.optionals stdenv.isDarwin [ + # Fix v4.9 segfault on Darwin. remove with the next update + # https://github.com/eradman/entr/issues/74 + (fetchpatch { + url = "https://github.com/eradman/entr/commit/468d77d45925abba826bb1dcda01487dbe37eb33.patch"; + sha256 = "17kkcrsnac0pb930sf2kix71h4c7krzsrvz8pskx0vm39n1c9xfi"; + includes = [ "entr.c" ]; + }) + ]; + postPatch = '' substituteInPlace Makefile.bsd --replace /bin/echo echo substituteInPlace entr.c --replace /bin/cat ${coreutils}/bin/cat diff --git a/third_party/nixpkgs/pkgs/tools/misc/esphome/dashboard.nix b/third_party/nixpkgs/pkgs/tools/misc/esphome/dashboard.nix new file mode 100644 index 0000000000..a701fbd73b --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/esphome/dashboard.nix @@ -0,0 +1,27 @@ +{ lib +, python3 +}: + +with python3.pkgs; buildPythonPackage rec { + pname = "esphome-dashboard"; + version = "20210623.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "0fc6xgi1naydm3wgk5lljnf6zggzdk6558cpyqlriw031gqnab77"; + }; + + # no tests + doCheck = false; + + pythonImportsCheck = [ + "esphome_dashboard" + ]; + + meta = with lib; { + description = "ESPHome dashboard"; + homepage = "https://esphome.io/"; + license = with licenses; [ asl20 ]; + maintainers = with maintainers; [ hexa ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/esphome/default.nix b/third_party/nixpkgs/pkgs/tools/misc/esphome/default.nix index fe02fe0d52..945af40a71 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/esphome/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/esphome/default.nix @@ -1,4 +1,5 @@ { lib +, pkgs , python3 , fetchFromGitHub , platformio @@ -6,17 +7,25 @@ , git }: +let + esphome-dashboard = pkgs.callPackage ./dashboard.nix {}; +in python3.pkgs.buildPythonApplication rec { pname = "esphome"; - version = "1.18.0"; + version = "1.19.4"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "1vz3d59wfqssfv1kvd4minlxibr0id06xfyg8956w9s3b22jc5vq"; + sha256 = "029ykjk24h21b0s0gha6kv9pvgallin6marzkb2vfbvr3icsmbz2"; }; + patches = [ + # fix missing write permissions on src files before modifing them + ./fix-src-permissions.patch + ]; + postPatch = '' # remove all version pinning (E.g tornado==5.1.1 -> tornado) sed -i -e "s/==[0-9.]*//" requirements.txt @@ -44,6 +53,7 @@ python3.pkgs.buildPythonApplication rec { click colorama cryptography + esphome-dashboard ifaddr paho-mqtt pillow @@ -66,6 +76,7 @@ python3.pkgs.buildPythonApplication rec { checkInputs = with python3.pkgs; [ hypothesis mock + pytest-asyncio pytest-mock pytest-sugar pytestCheckHook @@ -75,6 +86,10 @@ python3.pkgs.buildPythonApplication rec { $out/bin/esphome --help > /dev/null ''; + passthru = { + dashboard = esphome-dashboard; + }; + meta = with lib; { description = "Make creating custom firmwares for ESP32/ESP8266 super easy"; homepage = "https://esphome.io/"; diff --git a/third_party/nixpkgs/pkgs/tools/misc/esphome/fix-src-permissions.patch b/third_party/nixpkgs/pkgs/tools/misc/esphome/fix-src-permissions.patch new file mode 100644 index 0000000000..5e92350105 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/esphome/fix-src-permissions.patch @@ -0,0 +1,46 @@ +From f72c5035944065941daaa236b60664657c777726 Mon Sep 17 00:00:00 2001 +From: Martin Weinelt +Date: Wed, 23 Jun 2021 04:50:35 +0200 +Subject: [PATCH] Set u+w for copied src files before trying to overwrite them +MIME-Version: 1.0 +Content-Type: text/plain; charset=UTF-8 +Content-Transfer-Encoding: 8bit + +We store esphome in the nix store, which results in its file permissions +being 0444. Esphome, when compiling a firmware image, will copy these +files from the nix store to a working directory. When updating between +versions it will notice these files changed and try to copy the new +version over, which would break, because the user had no write +permissions on the files. + +❯ esphome compile 01e4ac.yml +INFO Reading configuration 01e4ac.yml... +INFO Detected timezone 'CET' with UTC offset 1 and daylight saving time from 27 March 02:00:00 to 30 October 03:00:00 +INFO Generating C++ source... +ERROR Error copying file /nix/store/lmzrgl1arqfd98jcss4rsmmy6dbffddn-esphome-1.19.2/lib/python3.8/site-packages/esphome/components/api/api_connection.cpp to 01e4ac/src/esphome/components/api/api_connection.cpp: [Errno 13] Permission denied: '01e4ac/src/esphome/components/api/api_connection.cpp' + +To fix this we modify chmod to 0644 just before esphome tries a copy +operation, which will fix permissions on existing working directories +just in time. +--- + esphome/helpers.py | 4 ++++ + 1 file changed, 4 insertions(+) + +diff --git a/esphome/helpers.py b/esphome/helpers.py +index ad7b8272..c456f4ff 100644 +--- a/esphome/helpers.py ++++ b/esphome/helpers.py +@@ -228,6 +228,10 @@ def copy_file_if_changed(src: os.PathLike, dst: os.PathLike) -> None: + if file_compare(src, dst): + return + mkdir_p(os.path.dirname(dst)) ++ try: ++ os.chmod(dst, 0o644) ++ except OSError: ++ pass + try: + shutil.copy(src, dst) + except OSError as err: +-- +2.31.1 + diff --git a/third_party/nixpkgs/pkgs/tools/misc/execline/default.nix b/third_party/nixpkgs/pkgs/tools/misc/execline/default.nix index 705a8a554c..095e43b9d3 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/execline/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/execline/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "execline"; - version = "2.8.0.0"; - sha256 = "0vbn4pdazy6x6213vn42k0khcij5bvkbrcfg7nw6inhf8154nx77"; + version = "2.8.0.1"; + sha256 = "1v9swmhw2rcrr9fmkmd7qh8qq0kslhmvxwz2a3bhan9ksabz8wx3"; description = "A small scripting language, to be used in place of a shell in non-interactive scripts"; diff --git a/third_party/nixpkgs/pkgs/tools/misc/expect/default.nix b/third_party/nixpkgs/pkgs/tools/misc/expect/default.nix index 1315ac8540..03e8e260ac 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/expect/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/expect/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, buildPackages, fetchurl, tcl, makeWrapper, autoreconfHook, fetchpatch }: -stdenv.mkDerivation rec { +tcl.mkTclDerivation rec { pname = "expect"; version = "5.45.4"; @@ -20,24 +20,14 @@ stdenv.mkDerivation rec { sed -i "s,/bin/stty,$(type -p stty),g" configure.in ''; - nativeBuildInputs = [ autoreconfHook makeWrapper tcl ]; - buildInputs = [ tcl ]; + nativeBuildInputs = [ autoreconfHook makeWrapper ]; strictDeps = true; hardeningDisable = [ "format" ]; - configureFlags = [ - "--with-tcl=${buildPackages.tcl}/lib" - "--with-tclinclude=${tcl}/include" - "--exec-prefix=${placeholder "out"}" - ]; - - postInstall = '' + postInstall = lib.optionalString stdenv.isDarwin '' for i in $out/bin/*; do - wrapProgram $i \ - --prefix PATH : "${tcl}/bin" \ - --prefix TCLLIBPATH ' ' $out/lib/* \ - ${lib.optionalString stdenv.isDarwin "--prefix DYLD_LIBRARY_PATH : $out/lib/expect${version}"} + wrapProgram $i --prefix DYLD_LIBRARY_PATH : $out/lib/expect${version} done ''; diff --git a/third_party/nixpkgs/pkgs/tools/misc/fend/default.nix b/third_party/nixpkgs/pkgs/tools/misc/fend/default.nix index ceaee9746a..6c4160b06e 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/fend/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/fend/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "fend"; - version = "0.1.16"; + version = "0.1.17"; src = fetchFromGitHub { owner = "printfn"; repo = pname; rev = "v${version}"; - sha256 = "sha256-ITS2wE4vwp0W/nlTyX55cY5E95VIwR46JBzF0pD/xsE="; + sha256 = "sha256-Xq2UjeZiKy9BjNQ9xnC7tppEwrEtg8ZN5BVDz1bUOmw="; }; - cargoSha256 = "sha256-YqOc/B+ZP1i9xJLrOguQ6fwQr6SV0qvQ3fWwguY2S0I="; + cargoSha256 = "sha256-Bf3fYHhpoX05AmTdwwdRU2YRfGVb1EmaGDm75i+Vs2w="; doInstallCheck = true; diff --git a/third_party/nixpkgs/pkgs/tools/misc/flashrom/default.nix b/third_party/nixpkgs/pkgs/tools/misc/flashrom/default.nix index 8fcfa9acb1..66a8b21340 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/flashrom/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/flashrom/default.nix @@ -7,6 +7,7 @@ , libftdi1 , libusb1 , pciutils +, installShellFiles }: stdenv.mkDerivation rec { @@ -18,8 +19,15 @@ stdenv.mkDerivation rec { sha256 = "0ax4kqnh7kd3z120ypgp73qy1knz47l6qxsqzrfkd97mh5cdky71"; }; + # Meson build doesn't build and install manpage. Only Makefile can. + # Build manpage from source directory. Here we're inside the ./build subdirectory + postInstall = '' + make flashrom.8 -C .. + installManPage ../flashrom.8 + ''; + mesonFlags = lib.optionals stdenv.isAarch64 [ "-Dpciutils=false" ]; - nativeBuildInputs = [ meson pkg-config ninja ]; + nativeBuildInputs = [ meson pkg-config ninja installShellFiles ]; buildInputs = [ libftdi1 libusb1 pciutils ]; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/tools/misc/fluent-bit/default.nix b/third_party/nixpkgs/pkgs/tools/misc/fluent-bit/default.nix index 89435e7698..5a5ad121b3 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/fluent-bit/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/fluent-bit/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "fluent-bit"; - version = "1.7.5"; + version = "1.7.9"; src = fetchFromGitHub { owner = "fluent"; repo = "fluent-bit"; rev = "v${version}"; - sha256 = "sha256-n7X6VlNZVsL+Tn9t3L4mTblVjPTKgTMmcRdkDGPXI8U="; + sha256 = "sha256-rL2IJYTMs0Yzo/oqrcI56krmVnxxxRWCebSjjbjiP/k="; }; nativeBuildInputs = [ cmake flex bison ]; diff --git a/third_party/nixpkgs/pkgs/tools/misc/freshfetch/Cargo.lock b/third_party/nixpkgs/pkgs/tools/misc/freshfetch/Cargo.lock new file mode 100644 index 0000000000..24cfb7e9de --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/freshfetch/Cargo.lock @@ -0,0 +1,587 @@ +# This file is automatically @generated by Cargo. +# It is not intended for manual editing. +version = 3 + +[[package]] +name = "aho-corasick" +version = "0.7.15" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "7404febffaa47dac81aa44dba71523c9d069b1bdc50a77db41195149e17f68e5" +dependencies = [ + "memchr", +] + +[[package]] +name = "ansi_term" +version = "0.11.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "ee49baf6cb617b853aa8d93bf420db2383fab46d314482ca2803b40d5fde979b" +dependencies = [ + "winapi", +] + +[[package]] +name = "atty" +version = "0.2.14" +source = 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"clml_rs-0.3.0" = "0hvd59zh7czk9jd1a2wwcm1acpcfbz32v9ka7ap6f74d638jcc19"; + }; + }; + + # freshfetch depends on rust nightly features + RUSTC_BOOTSTRAP = 1; + + buildInputs = lib.optionals stdenv.isDarwin [ + AppKit + CoreFoundation + DiskArbitration + Foundation + IOKit + ]; + + meta = with lib; { + description = "A fresh take on neofetch"; + homepage = "https://github.com/k4rakara/freshfetch"; + license = licenses.mit; + maintainers = with maintainers; [ figsoda ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/fsearch/default.nix b/third_party/nixpkgs/pkgs/tools/misc/fsearch/default.nix new file mode 100644 index 0000000000..e2782ef652 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/fsearch/default.nix @@ -0,0 +1,58 @@ +{ lib +, stdenv +, fetchFromGitHub +, gtk3 +, pcre +, glib +, desktop-file-utils +, meson +, ninja +, pkg-config +, wrapGAppsHook +, unstableGitUpdater +, gettext +}: + +stdenv.mkDerivation { + pname = "fsearch"; + version = "unstable-2021-06-23"; + + src = fetchFromGitHub { + owner = "cboxdoerfer"; + repo = "fsearch"; + rev = "9300cc03ab2f0cea3a70abb5477bda8b52c4afd1"; + sha256 = "16qh2si48j113yhay5wawr7dvldks6jb32za41j2sng7n4ryw221"; + }; + + nativeBuildInputs = [ + desktop-file-utils + meson + ninja + pkg-config + wrapGAppsHook + gettext + ]; + + buildInputs = [ + glib + gtk3 + pcre + ]; + + preFixup = '' + substituteInPlace $out/share/applications/io.github.cboxdoerfer.FSearch.desktop \ + --replace "Exec=fsearch" "Exec=$out/bin/fsearch" + ''; + + passthru.updateScript = unstableGitUpdater { + url = "https://github.com/cboxdoerfer/fsearch.git"; + }; + + meta = with lib; { + description = "A fast file search utility for Unix-like systems based on GTK+3"; + homepage = "https://github.com/cboxdoerfer/fsearch.git"; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ artturin ]; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/fselect/default.nix b/third_party/nixpkgs/pkgs/tools/misc/fselect/default.nix index eaddc8790e..e877304a2d 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/fselect/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/fselect/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "fselect"; - version = "0.7.5"; + version = "0.7.6"; src = fetchFromGitHub { owner = "jhspetersson"; repo = "fselect"; rev = version; - sha256 = "sha256-6/mcGq6qKYmcBcNndYYJB3rnHr6ZVpEcVjJBz7NEJEw="; + sha256 = "sha256-uIqkk0aQVPXUWjOWmMTdM28Ihi+mflPpxnXJLFIQYJw="; }; - cargoSha256 = "sha256-W6YmFsTlU3LD3tvhLuA/3k/269gR2RLLOo86BQC5x98="; + cargoSha256 = "sha256-5LRCLJbLiocB/VDf9MMxyIsERmOvuSAQEe822Dcu2j8="; nativeBuildInputs = [ installShellFiles ]; buildInputs = lib.optional stdenv.isDarwin libiconv; diff --git a/third_party/nixpkgs/pkgs/tools/misc/fsmon/default.nix b/third_party/nixpkgs/pkgs/tools/misc/fsmon/default.nix index c845c3de8e..94b209bcd0 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/fsmon/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/fsmon/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "fsmon"; - version = "1.8.2"; + version = "1.8.4"; src = fetchFromGitHub { owner = "nowsecure"; repo = "fsmon"; rev = version; - sha256 = "0y0gqb07girhz3r7gn9yrrysvhj5fapdafim0q8n7krk5y23hmh0"; + sha256 = "sha256-4KF8h+YdCMrF9Yk/9y71WqNjzyoEZnddriDZAdpIaa4="; }; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/tools/misc/g203-led/default.nix b/third_party/nixpkgs/pkgs/tools/misc/g203-led/default.nix new file mode 100644 index 0000000000..7290b57a32 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/g203-led/default.nix @@ -0,0 +1,43 @@ +{ lib, stdenv +, fetchFromGitHub +, python3 +}: +stdenv.mkDerivation rec { + pname = "g203-led"; + version = "unstable-2021-05-08"; + src = fetchFromGitHub { + owner = "smasty"; + repo = pname; + rev = "f9d10ba3aa8f9359f928bbab0a2ea00cefc69f4b"; + sha256 = "1fhaimci80xmihg84bgrml61zr56pi9rkxfbs13vvw9dwjf031k0"; + }; + + buildInputs = [ + (python3.withPackages (ps: with ps; [ + pyusb + ])) + ]; + + postPatch = '' + patchShebangs g203-led.py + ''; + + installPhase = '' + runHook preInstall + install -D g203-led.py $out/bin/g203-led + runHook postInstall + ''; + + meta = with lib; { + description = "Logitech G203 Prodigy / G203 LightSync Mouse LED control for Linux"; + longDescription = '' + Allows you to control the LED lighting of your G203 Prodigy + or G203 LightSync Mouse programmatically. + Inspired by and based on g810-led. + ''; + license = licenses.mit; + maintainers = with maintainers; [ r-burns ]; + homepage = "https://github.com/smasty/g203-led"; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/gh-ost/default.nix b/third_party/nixpkgs/pkgs/tools/misc/gh-ost/default.nix index bc7d3f6db4..2e2d8ccfc1 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/gh-ost/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/gh-ost/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { pname = "gh-ost"; - version = "1.1.1"; + version = "1.1.2"; src = fetchFromGitHub { owner = "github"; repo = "gh-ost"; rev = "v${version}"; - sha256 = "sha256-srJXzY4TTHZDYKq8OPqin4zRoYlmaJKhHXDzO/GjBV8="; + sha256 = "sha256-q1wtATFm65c2esQ+TPR2f+YafYeOmC79EumHyGxXrnE="; }; goPackagePath = "github.com/github/gh-ost"; diff --git a/third_party/nixpkgs/pkgs/tools/misc/gitlint/default.nix b/third_party/nixpkgs/pkgs/tools/misc/gitlint/default.nix new file mode 100644 index 0000000000..014cc76e71 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/gitlint/default.nix @@ -0,0 +1,44 @@ +{ lib +, buildPythonApplication +, fetchFromGitHub +, gitMinimal +, arrow +, click +, sh +, wheel +}: + +buildPythonApplication rec { + pname = "gitlint"; + version = "0.15.1"; + + src = fetchFromGitHub { + owner = "jorisroovers"; + repo = "gitlint"; + rev = "v${version}"; + sha256 = "sha256-CqmE4V+svSuQAsoX0I3NpUqPU5CQf3fyCHJPrjUjHF4="; + }; + + nativeBuildInputs = [ wheel ]; + + propagatedBuildInputs = [ + arrow + click + sh + ]; + + preCheck = '' + export PATH="$out/bin:$PATH" + ''; + + checkInputs = [ + gitMinimal + ]; + + meta = { + description = "Linting for your git commit messages"; + homepage = "http://jorisroovers.github.io/gitlint"; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ ethancedwards8 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/go.rice/default.nix b/third_party/nixpkgs/pkgs/tools/misc/go.rice/default.nix index 295bf01027..f691221dd7 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/go.rice/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/go.rice/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "go.rice"; - version = "1.0.0"; + version = "1.0.2"; src = fetchFromGitHub { owner = "GeertJohan"; repo = "go.rice"; rev = "v${version}"; - sha256 = "0m1pkqnx9glf3mlx5jdaby9yxccbl02jpjgpi4m7x1hb4s2gn6vx"; + sha256 = "sha256-jO4otde/m52L2NrE88aXRjdGDBNxnbP1Zt+5fEqfNIc="; }; - vendorSha256 = "0cb5phyl2zm1xnkhvisv0lzgknsi93yzmpayg30w7jc6z4icwnw7"; + vendorSha256 = "sha256-VlpdZcqg7yWUADN8oD/IAgAXVdzJeIeymx2Pu/7E21o="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/tools/misc/goreleaser/default.nix b/third_party/nixpkgs/pkgs/tools/misc/goreleaser/default.nix index a5c3fbad32..f5ed58f84f 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/goreleaser/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/goreleaser/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "goreleaser"; - version = "0.166.2"; + version = "0.172.0"; src = fetchFromGitHub { owner = "goreleaser"; repo = pname; rev = "v${version}"; - sha256 = "sha256-+8hh4BR6sTpQyNeiaXgcp/ezPptvbZESky6VAAg1dfI="; + sha256 = "sha256-QHtxrdmtmvnyMmtpvbEw5VjGz2XN1iqHu+5dHS9yiNo="; }; - vendorSha256 = "sha256-PkSvdpP9SuftxdcZMA5xG1zSb87e1Ui/oX+HdLBEW0E="; + vendorSha256 = "sha256-Zd48I7e5zCbSXz5RVckMXQMpqvf6gAoajx5yLk2ODmU="; buildFlagsArray = [ "-ldflags=" diff --git a/third_party/nixpkgs/pkgs/tools/misc/graylog/default.nix b/third_party/nixpkgs/pkgs/tools/misc/graylog/default.nix index b41cc9cb06..8d18d654c7 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/graylog/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/graylog/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "graylog"; - version = "3.3.9"; + version = "4.0.7"; src = fetchurl { url = "https://packages.graylog2.org/releases/graylog/graylog-${version}.tgz"; - sha256 = "1wl9j2jgjg5gwcsh92qr5f68wx12nvwadc9xkaa9wwd7x3z825jq"; + sha256 = "sha256-sZn/ug4oh/SHbICbiQeAmtEIwT3++DBWbT2XBkYGYUc="; }; dontBuild = true; diff --git a/third_party/nixpkgs/pkgs/tools/misc/gwe/default.nix b/third_party/nixpkgs/pkgs/tools/misc/gwe/default.nix new file mode 100644 index 0000000000..2eeb2f0d2c --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/gwe/default.nix @@ -0,0 +1,89 @@ +{ lib +, stdenv +, fetchFromGitLab +, wrapGAppsHook +, makeWrapper +, pkg-config +, meson +, ninja +, cmake +, gobject-introspection +, desktop-file-utils +, python3 +, gtk3 +, libdazzle +, libappindicator-gtk3 +, libnotify +, nvidia_x11 + }: + +let + pythonEnv = python3.withPackages (pypkgs: with pypkgs; [ + injector + matplotlib + peewee + pynvml + pygobject3 + xlib + pyxdg + requests + rx + gtk3 + ]); +in stdenv.mkDerivation rec { + pname = "gwe"; + version = "0.15.3"; + + src = fetchFromGitLab { + owner = "leinardi"; + repo = pname; + rev = version; + sha256 = "1znd2g02j0klg8w6cgwvaxc8anan6sidadknl0vh9jxmzz75xp9z"; + }; + + prePatch = '' + patchShebangs scripts/{make_local_manifest,meson_post_install}.py + + substituteInPlace gwe/repository/nvidia_repository.py \ + --replace "from py3nvml import py3nvml" "import pynvml" \ + --replace "py3nvml.py3nvml" "pynvml" \ + --replace "py3nvml" "pynvml" + ''; + + nativeBuildInputs = [ + wrapGAppsHook + pkg-config + meson + ninja + cmake + gobject-introspection + desktop-file-utils + pythonEnv + ]; + + buildInputs = [ + gtk3 + libdazzle + libappindicator-gtk3 + libnotify + ]; + + postInstall = '' + mv $out/bin/gwe $out/lib/gwe-bin + + makeWrapper ${pythonEnv}/bin/python $out/bin/gwe \ + --add-flags "$out/lib/gwe-bin" \ + --prefix LD_LIBRARY_PATH : "/run/opengl-driver/lib" \ + --prefix PATH : "${builtins.concatStringsSep ":" [ (lib.makeBinPath [ nvidia_x11 nvidia_x11.settings ]) "/run/wrappers/bin" ]}" \ + --unset "SHELL" \ + ''${gappsWrapperArgs[@]} + ''; + + meta = with lib; { + description = "System utility designed to provide information, control the fans and overclock your NVIDIA card"; + homepage = "https://gitlab.com/leinardi/gwe"; + platforms = platforms.linux; + license = licenses.gpl3Only; + maintainers = [ maintainers.ivar ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/hdf4/darwin-aarch64.patch b/third_party/nixpkgs/pkgs/tools/misc/hdf4/darwin-aarch64.patch new file mode 100644 index 0000000000..cff81e5811 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/hdf4/darwin-aarch64.patch @@ -0,0 +1,11 @@ +--- a/hdf/src/hdfi.h 2021-06-16 16:31:31.000000000 +1200 ++++ b/hdf/src/hdfi.h 2021-06-16 16:42:26.000000000 +1200 +@@ -1343,7 +1343,7 @@ + #endif /* IA64 */ + + /* Linux AArch64 */ +-#if defined __aarch64__ ++#if defined __aarch64__ && !defined __APPLE__ + + #ifdef GOT_MACHINE + If you get an error on this line more than one machine type has been defined. diff --git a/third_party/nixpkgs/pkgs/tools/misc/hdf4/default.nix b/third_party/nixpkgs/pkgs/tools/misc/hdf4/default.nix index 5373c64d64..99acda6b78 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/hdf4/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/hdf4/default.nix @@ -44,6 +44,7 @@ stdenv.mkDerivation rec { url = "https://src.fedoraproject.org/rpms/hdf/raw/edbe5f49646b609f5bc9aeeee5a2be47e9556e8c/f/hdf-aarch64.patch"; sha256 = "112svcsilk16ybbsi8ywnxfl2p1v44zh3rfn4ijnl8z08vfqrvvs"; }) + ./darwin-aarch64.patch ]; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/tools/misc/infracost/default.nix b/third_party/nixpkgs/pkgs/tools/misc/infracost/default.nix new file mode 100644 index 0000000000..286bc4cbca --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/infracost/default.nix @@ -0,0 +1,25 @@ +{ lib, buildGoModule, fetchFromGitHub, terraform }: + +buildGoModule rec { + pname = "infracost"; + version = "0.9.1"; + + src = fetchFromGitHub { + owner = "infracost"; + rev = "v${version}"; + repo = "infracost"; + sha256 = "sha256-3dR4NZ1PiMuHNO+xl3zxeBLPOZTLAbJ0VtYJNYpJuXI="; + }; + + vendorSha256 = "sha256-YHewZsIiDPsgJVYwQX/FovlD+UzJflXy/0oglk8ZkKk="; + + checkInputs = [ terraform ]; + checkPhase = "make test"; + + meta = with lib; { + description = "Cloud cost estimates for Terraform in your CLI and pull requests"; + homepage = "https://github.com/infracost/infracost"; + license = [ licenses.asl20 ]; + maintainers = [ maintainers.davegallant ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/kak-lsp/default.nix b/third_party/nixpkgs/pkgs/tools/misc/kak-lsp/default.nix index d57a48598e..86d8581537 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/kak-lsp/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/kak-lsp/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "kak-lsp"; - version = "9.0.0"; + version = "10.0.0"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "1wfv2fy5ga6kc51zka3pak0hq97csm2l11bz74w3n1hrf5q9nnf8"; + sha256 = "sha256-SmK4G9AoKGqKGbXucn5AO5DTOeVNq3gCBGvDTIJQgRU="; }; - cargoSha256 = "1b6bcqbdkpxgxyfz89d8fhxfxvqc988pa9wxq5fsihnix8bm7jdk"; + cargoSha256 = "sha256-iY5xT8e/gRN/mBT9v5LhMcl9g1/SyrH/glPBP+toZ9o="; buildInputs = lib.optional stdenv.isDarwin [ Security ]; diff --git a/third_party/nixpkgs/pkgs/tools/misc/less/default.nix b/third_party/nixpkgs/pkgs/tools/misc/less/default.nix index 157fc6607b..d63861ace3 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/less/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/less/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "less"; - version = "563"; + version = "581.2"; src = fetchurl { - url = "http://www.greenwoodsoftware.com/${pname}/${pname}-${version}.tar.gz"; - sha256 = "16lsvk88vwjwp5ax1wnll44wxwnzs8lb2fn90xx2si64kwmnsnyf"; + url = "https://www.greenwoodsoftware.com/${pname}/${pname}-${version}.tar.gz"; + sha256 = "0fyqslvrasv19qjvqrwfwz2n7mnm93y61x9bcx09ga90mxyb8d6f"; }; configureFlags = [ "--sysconfdir=/etc" ] # Look for ‘sysless’ in /etc. @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { buildInputs = [ ncurses ]; meta = with lib; { - homepage = "http://www.greenwoodsoftware.com/less/"; + homepage = "https://www.greenwoodsoftware.com/less/"; description = "A more advanced file pager than ‘more’"; platforms = platforms.unix; license = licenses.gpl3; diff --git a/third_party/nixpkgs/pkgs/tools/misc/lf/default.nix b/third_party/nixpkgs/pkgs/tools/misc/lf/default.nix index 0d684b16be..8aa8e9a663 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/lf/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/lf/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "lf"; - version = "22"; + version = "24"; src = fetchFromGitHub { owner = "gokcehan"; repo = "lf"; rev = "r${version}"; - sha256 = "10zmac9xza2v7l13zkavmc34ppcpmb82v8dxvrv4ggm261ns1abr"; + sha256 = "0nc7vfkaxxl2a201wnbz74an3siz8cjwrfylx17v6al5n93vxip0"; }; - vendorSha256 = "1yjsig2x6zrxdjnds6nqqq3r3g5lq8g9dvmz60nbifqhcx112bcw"; + vendorSha256 = "sha256-ujQh4aE++K/fn3PJqkAbTtwRyJPSI9TJQ1DvwLF9etU="; nativeBuildInputs = [ installShellFiles ]; @@ -35,6 +35,6 @@ buildGoModule rec { changelog = "https://github.com/gokcehan/lf/releases/tag/r${version}"; license = licenses.mit; platforms = platforms.unix; - maintainers = with maintainers; [ ]; + maintainers = with maintainers; [ dotlambda ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin-client.nix b/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin-client.nix index 6f9c07209c..a940fba296 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin-client.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin-client.nix @@ -30,7 +30,7 @@ in stdenv.mkDerivation { description = "Bitcoin client query library"; homepage = "https://github.com/libbitcoin/libbitcoin-client"; platforms = platforms.linux ++ platforms.darwin; - maintainers = with maintainers; [ chris-martin ]; + maintainers = with maintainers; [ ]; # AGPL with a lesser clause license = licenses.agpl3; diff --git a/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin-explorer.nix b/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin-explorer.nix index dd0ed85731..7d00e4c09a 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin-explorer.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin-explorer.nix @@ -31,7 +31,7 @@ in stdenv.mkDerivation { description = "Bitcoin command line tool"; homepage = "https://github.com/libbitcoin/libbitcoin-explorer"; platforms = platforms.linux ++ platforms.darwin; - maintainers = with maintainers; [ chris-martin asymmetric ]; + maintainers = with maintainers; [ asymmetric ]; # AGPL with a lesser clause license = licenses.agpl3; diff --git a/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin.nix b/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin.nix index 122aed696f..b4f91bc936 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/libbitcoin/libbitcoin.nix @@ -31,7 +31,7 @@ in stdenv.mkDerivation { description = "C++ library for building bitcoin applications"; homepage = "https://libbitcoin.org/"; platforms = platforms.linux ++ platforms.darwin; - maintainers = with maintainers; [ chris-martin ]; + maintainers = with maintainers; [ ]; # AGPL with a lesser clause license = licenses.agpl3; diff --git a/third_party/nixpkgs/pkgs/tools/misc/livedl/default.nix b/third_party/nixpkgs/pkgs/tools/misc/livedl/default.nix new file mode 100644 index 0000000000..b989fe27a6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/livedl/default.nix @@ -0,0 +1,25 @@ +{ lib, buildGoModule, fetchFromGitHub }: + +buildGoModule rec { + pname = "livedl"; + version = "unstable-2021-05-16"; + + src = fetchFromGitHub { + owner = "himananiito"; + repo = pname; + rev = "a8720f1e358e5b0ade6fdeb8aacc00781e6cc504"; + sha256 = "1zax215jp6sl47m8ahssyyrbzn96dh74srq9g61jc76sq10xg329"; + }; + + sourceRoot = "source/src"; + + vendorSha256 = sha256:g5Y1IH1U1zOOHygTzAJuBnUj+MyPe64KHTYikipt3TY=; + + meta = with lib; { + description = "Command-line tool to download nicovideo.jp livestreams"; + homepage = "https://github.com/himananiito/livedl"; + license = licenses.mit; + maintainers = with maintainers; [ wakira ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/markdown-anki-decks/default.nix b/third_party/nixpkgs/pkgs/tools/misc/markdown-anki-decks/default.nix new file mode 100644 index 0000000000..d74eb84dc3 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/markdown-anki-decks/default.nix @@ -0,0 +1,45 @@ +{ lib +, python3 +}: + +python3.pkgs.buildPythonApplication rec { + pname = "markdown-anki-decks"; + version = "1.0.0"; + + format = "pyproject"; + + src = python3.pkgs.fetchPypi { + inherit pname version; + sha256 = "R6T8KOHMb1Neg/RG5JQl9+7LxOkAoZL0L5wvVaqm9O0="; + }; + + nativeBuildInputs = with python3.pkgs; [ + poetry-core + ]; + + propagatedBuildInputs = with python3.pkgs; [ + genanki + typer + colorama + shellingham + beautifulsoup4 + markdown + python-frontmatter + ]; + + postPatch = '' + # No API changes. + substituteInPlace pyproject.toml --replace 'python-frontmatter = "^0.5.0"' 'python-frontmatter = "^1.0.0"' + ''; + + # No tests available on Pypi and there is only a failing version assertion test in the repo. + doCheck = false; + + meta = with lib; { + description = "Simple program to convert markdown files into anki decks"; + maintainers = with maintainers; [ jtojnar ]; + homepage = "https://github.com/lukesmurray/markdown-anki-decks"; + license = licenses.mit; + platforms = platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/mathpix-snipping-tool/default.nix b/third_party/nixpkgs/pkgs/tools/misc/mathpix-snipping-tool/default.nix new file mode 100644 index 0000000000..7e940ee4f7 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/mathpix-snipping-tool/default.nix @@ -0,0 +1,31 @@ +{ appimageTools, lib, fetchurl }: +let + pname = "mathpix-snipping-tool"; + version = "03.00.0025"; + name = "${pname}-${version}"; + + src = fetchurl { + url = "https://download.mathpix.com/linux/Mathpix_Snipping_Tool-x86_64.v${version}.AppImage"; + sha256 = "0p39rsmjfz3m5s3k9pmmkqbp8f21s1cwjgspz8m47dq5jjls8ay8"; + }; + + appimageContents = appimageTools.extract { inherit name src; }; +in appimageTools.wrapType2 { + inherit name src; + + extraInstallCommands = '' + mv $out/bin/${name} $out/bin/${pname} + + install -m 444 -D ${appimageContents}/${pname}.desktop -t $out/share/applications + + cp -r ${appimageContents}/usr/share/icons $out/share + ''; + + meta = with lib; { + description = "OCR tool to convert pictures to LaTeX."; + homepage = "https://mathpix.com/"; + license = licenses.unfree; + maintainers = [ maintainers.hiro98 ]; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/mongodb-compass/default.nix b/third_party/nixpkgs/pkgs/tools/misc/mongodb-compass/default.nix index 8ede051048..8baeb1556b 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/mongodb-compass/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/mongodb-compass/default.nix @@ -1,12 +1,12 @@ { lib, stdenv, fetchurl, dpkg -, alsaLib, at-spi2-atk, at-spi2-core, atk, cairo, cups, curl, dbus, expat, fontconfig, freetype, glib +, alsa-lib, at-spi2-atk, at-spi2-core, atk, cairo, cups, curl, dbus, expat, fontconfig, freetype, glib , gnome2, gdk-pixbuf, gtk3, pango, libnotify, libsecret, libuuid, libxcb, nspr, nss, systemd, xorg, wrapGAppsHook }: let version = "1.25.0"; rpath = lib.makeLibraryPath [ - alsaLib + alsa-lib at-spi2-atk at-spi2-core atk diff --git a/third_party/nixpkgs/pkgs/tools/misc/ncdu/default.nix b/third_party/nixpkgs/pkgs/tools/misc/ncdu/default.nix index 3510be4ed7..1237645eba 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/ncdu/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/ncdu/default.nix @@ -16,6 +16,6 @@ stdenv.mkDerivation rec { homepage = "https://dev.yorhel.nl/ncdu"; license = licenses.mit; platforms = platforms.all; - maintainers = with maintainers; [ pSub zowoq ]; + maintainers = with maintainers; [ pSub SuperSandro2000 ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/misc/neofetch/default.nix b/third_party/nixpkgs/pkgs/tools/misc/neofetch/default.nix index 68cebca4bc..3d4bf8500b 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/neofetch/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/neofetch/default.nix @@ -1,4 +1,6 @@ -{ lib, stdenvNoCC, fetchFromGitHub, bash, makeWrapper, pciutils, ueberzug }: +{ lib, stdenvNoCC, fetchFromGitHub, bash, makeWrapper, pciutils +, x11Support ? true, ueberzug +}: stdenvNoCC.mkDerivation rec { pname = "neofetch"; @@ -20,7 +22,7 @@ stdenvNoCC.mkDerivation rec { postInstall = '' wrapProgram $out/bin/neofetch \ - --prefix PATH : ${lib.makeBinPath [ pciutils ueberzug ]} + --prefix PATH : ${lib.makeBinPath ([ pciutils ] ++ lib.optional x11Support ueberzug) } ''; makeFlags = [ diff --git a/third_party/nixpkgs/pkgs/tools/misc/nix-direnv/default.nix b/third_party/nixpkgs/pkgs/tools/misc/nix-direnv/default.nix index 94ce54a2a9..de7074d12b 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/nix-direnv/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/nix-direnv/default.nix @@ -1,20 +1,30 @@ -{ lib, stdenv, fetchFromGitHub, gnugrep, nixUnstable }: +{ lib +, stdenv +, fetchFromGitHub +, gnugrep +, nixStable +, nixUnstable +, enableFlakes ? false +}: +let + nix = if enableFlakes then nixUnstable else nixStable; +in stdenv.mkDerivation rec { pname = "nix-direnv"; - version = "1.2.6"; + version = "1.4.0"; src = fetchFromGitHub { owner = "nix-community"; repo = "nix-direnv"; rev = version; - sha256 = "sha256-0dCIHgoyNgpxbrPDv26oLdU+npcIgpCQdpX4HzS0vN0="; + sha256 = "sha256-BKiuYvxgY2P7GK59jul5l0kHNrJtD2jmsMGmX0+09hY="; }; # Substitute instead of wrapping because the resulting file is # getting sourced, not executed: postPatch = '' - sed -i "1a NIX_BIN_PREFIX=${nixUnstable}/bin/" direnvrc + sed -i "1a NIX_BIN_PREFIX=${nix}/bin/" direnvrc substituteInPlace direnvrc --replace "grep" "${gnugrep}/bin/grep" ''; diff --git a/third_party/nixpkgs/pkgs/tools/misc/nncp/default.nix b/third_party/nixpkgs/pkgs/tools/misc/nncp/default.nix index dbc709dd41..fc02431c76 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/nncp/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/nncp/default.nix @@ -10,11 +10,11 @@ stdenv.mkDerivation rec { pname = "nncp"; - version = "6.4.0"; + version = "6.5.0"; src = fetchurl { url = "http://www.nncpgo.org/download/${pname}-${version}.tar.xz"; - sha256 = "16xrwhr7avss238k83ih1njl0gfca57ghg360ba9ixlssrb1239x"; + sha256 = "16hbcwwf65h2avgdyya2bk42bmmqnfl1m5v7y23cyp174ykjl794"; }; nativeBuildInputs = [ go redo-apenwarr ]; diff --git a/third_party/nixpkgs/pkgs/tools/misc/notify/default.nix b/third_party/nixpkgs/pkgs/tools/misc/notify/default.nix new file mode 100644 index 0000000000..0d7e6af836 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/notify/default.nix @@ -0,0 +1,37 @@ +{ lib +, buildGoModule +, fetchFromGitHub +}: + +buildGoModule rec { + pname = "notify"; + version = "0.0.2"; + + src = fetchFromGitHub { + owner = "projectdiscovery"; + repo = pname; + rev = "v${version}"; + sha256 = "1nlsl4himxs5jv0fcd48jkwjnmn1w3alp0dcm1awmp6702zrsgqj"; + }; + + vendorSha256 = "13dz0sk3561hrixsl1ghr9y0pzap2a8zrlbzzb7zs7550snbdcyg"; + + modRoot = "."; + subPackages = [ + "cmd/notify/" + ]; + + # Test files are not part of the release tarball + doCheck = false; + + meta = with lib; { + description = "Notify allows sending the output from any tool to Slack, Discord and Telegram"; + longDescription = '' + Notify is a helper utility written in Go that allows you to post the output from any tool + to Slack, Discord, and Telegram. + ''; + homepage = "https://github.com/projectdiscovery/notify"; + license = licenses.mit; + maintainers = with maintainers; [ hanemile ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/ntfy/default.nix b/third_party/nixpkgs/pkgs/tools/misc/ntfy/default.nix index 23d4fd57f6..e2bb64ef52 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/ntfy/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/ntfy/default.nix @@ -17,7 +17,7 @@ python3Packages.buildPythonApplication rec { propagatedBuildInputs = with python3Packages; [ requests ruamel_yaml appdirs - sleekxmpp dns + sleekxmpp dnspython emoji psutil matrix-client diff --git a/third_party/nixpkgs/pkgs/tools/misc/nvimpager/default.nix b/third_party/nixpkgs/pkgs/tools/misc/nvimpager/default.nix index 61f9e7262c..e079891988 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/nvimpager/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/nvimpager/default.nix @@ -1,36 +1,43 @@ { fetchFromGitHub , lib, stdenv , ncurses, neovim, procps -, pandoc, lua51Packages, util-linux +, scdoc, lua51Packages, util-linux }: stdenv.mkDerivation rec { pname = "nvimpager"; - version = "0.9"; + version = "0.10"; src = fetchFromGitHub { owner = "lucc"; repo = pname; rev = "v${version}"; - sha256 = "1xy5387szfw0bp8dr7d4z33wd4xva7q219rvz8gc0vvv1vsy73va"; + sha256 = "sha256-okYnPwuxU/syxcKIMUBc25r791D6Bug2w2axH4vvmAY="; }; buildInputs = [ ncurses # for tput procps # for nvim_get_proc() which uses ps(1) ]; - nativeBuildInputs = [ pandoc ]; + nativeBuildInputs = [ scdoc ]; makeFlags = [ "PREFIX=$(out)" ]; - buildFlags = [ "nvimpager.configured" ]; + buildFlags = [ "nvimpager.configured" "nvimpager.1" ]; preBuild = '' patchShebangs nvimpager substituteInPlace nvimpager --replace ':-nvim' ':-${neovim}/bin/nvim' + # remove git command from makefile as we run from a tarball + # replace with actual timestamp of the commit + substituteInPlace makefile --replace '$(shell git log -1 --no-show-signature --pretty="%ct")' 1623019602 ''; doCheck = true; checkInputs = [ lua51Packages.busted util-linux neovim ]; - checkPhase = ''script -c "busted --lpath './?.lua' test"''; + checkPhase = '' + runHook preCheck + script -c "busted --lpath './?.lua' test" + runHook postCheck + ''; meta = with lib; { description = "Use neovim as pager"; diff --git a/third_party/nixpkgs/pkgs/tools/misc/osm2pgsql/default.nix b/third_party/nixpkgs/pkgs/tools/misc/osm2pgsql/default.nix index 4d959c6480..8208459bc8 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/osm2pgsql/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/osm2pgsql/default.nix @@ -16,13 +16,13 @@ stdenv.mkDerivation rec { pname = "osm2pgsql"; - version = "1.4.2"; + version = "1.5.0"; src = fetchFromGitHub { owner = "openstreetmap"; repo = pname; rev = version; - sha256 = "141blh6lwbgn8hh45xaa0yiwygdc444h9zahx5xrzx5pck9zb5ps"; + sha256 = "sha256-PHr9wP+DgsiQAvrVNO8Aa/X/dkrAUnlPDwAzSISa0GM="; }; nativeBuildInputs = [ cmake ]; @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "OpenStreetMap data to PostgreSQL converter"; homepage = "https://osm2pgsql.org"; - license = licenses.gpl2; + license = licenses.gpl2Plus; platforms = with platforms; linux ++ darwin; maintainers = with maintainers; [ jglukasik das-g ]; }; diff --git a/third_party/nixpkgs/pkgs/tools/misc/pferd/default.nix b/third_party/nixpkgs/pkgs/tools/misc/pferd/default.nix index 38d7355e94..c964a33455 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/pferd/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/pferd/default.nix @@ -5,14 +5,14 @@ python3Packages.buildPythonApplication rec { pname = "pferd"; - version = "3.0.1"; + version = "3.1.0"; format = "pyproject"; src = fetchFromGitHub { owner = "Garmelon"; repo = "PFERD"; rev = "v${version}"; - sha256 = "1s0z8yajy3n194pnlqb48hy2n5qvhkzwbpksrdyds79vfq0b9rdl"; + sha256 = "08kcl1c8z8qx65dfz5ghmbfqyjgkng4g9ymcnhydiz8j27smkj5d"; }; propagatedBuildInputs = with python3Packages; [ diff --git a/third_party/nixpkgs/pkgs/tools/misc/pgbadger/default.nix b/third_party/nixpkgs/pkgs/tools/misc/pgbadger/default.nix new file mode 100644 index 0000000000..d6e3588f6b --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/pgbadger/default.nix @@ -0,0 +1,31 @@ +{ buildPerlPackage, lib, fetchFromGitHub, which, bzip2, PodMarkdown, JSONXS +, TextCSV }: +buildPerlPackage rec { + pname = "pgbadger"; + version = "11.5"; + src = fetchFromGitHub { + owner = "darold"; + repo = "pgbadger"; + rev = "98b38161ba99faae77c81d5fa47bd769c1dd750b"; + sha256 = "0r01mx1922g1m56x4958cihk491zjlaijvap0i32grjmnv4s5v88"; + }; + + postPatch = '' + patchShebangs ./pgbadger + ''; + + outputs = [ "out" ]; + + PERL_MM_OPT = "INSTALL_BASE=${placeholder "out"}"; + + buildInputs = [ PodMarkdown JSONXS TextCSV ]; + + checkInputs = [ which bzip2 ]; + + meta = { + homepage = "https://github.com/darold/pgbadger"; + description = "A fast PostgreSQL Log Analyzer"; + license = lib.licenses.postgresql; + maintainers = lib.teams.determinatesystems.members; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/pgcenter/default.nix b/third_party/nixpkgs/pkgs/tools/misc/pgcenter/default.nix index 27e228f0f2..c27252cc70 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/pgcenter/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/pgcenter/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "pgcenter"; - version = "0.8.0"; + version = "0.9.0"; src = fetchFromGitHub { owner = "lesovsky"; repo = "pgcenter"; rev = "v${version}"; - sha256 = "sha256-ow26wuM7nw/WbeaPVcNm5iYUYLydeujhw+7BcTirPcA="; + sha256 = "0l3da7migx1gprhlwc98x30qh6lmrn8hizanxgs3hxl0arbrn710"; }; - vendorSha256 = "sha256-9hYiyZ34atmSL7JvuXyiGU7HR4E6qN7bGZlyU+hP+FU="; + vendorSha256 = "0mgq9zl56wlr37dxxa1sh53wfkhrl9ybjvxj5y9djspqkp4j45pn"; subPackages = [ "cmd" ]; @@ -25,6 +25,7 @@ buildGoModule rec { meta = with lib; { homepage = "https://pgcenter.org/"; + changelog = "https://github.com/lesovsky/pgcenter/raw/v${version}/doc/Changelog"; description = "Command-line admin tool for observing and troubleshooting PostgreSQL"; license = licenses.bsd3; maintainers = [ maintainers.marsam ]; diff --git a/third_party/nixpkgs/pkgs/tools/misc/piston-cli/default.nix b/third_party/nixpkgs/pkgs/tools/misc/piston-cli/default.nix index df244063b1..ec77007804 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/piston-cli/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/piston-cli/default.nix @@ -2,11 +2,11 @@ python3Packages.buildPythonApplication rec { pname = "piston-cli"; - version = "1.4.1"; + version = "1.4.3"; src = python3Packages.fetchPypi { inherit pname version; - sha256 = "o8GPtSQ119AKB64hAH8VY6iJmhXcSFqjOanmXQl0tHo="; + sha256 = "qvDGVJcaMXUajdUQWl4W1dost8k0PsS9XX/o8uQrtfY="; }; propagatedBuildInputs = with python3Packages; [ rich prompt_toolkit requests pygments pyyaml ]; diff --git a/third_party/nixpkgs/pkgs/tools/misc/plocate/default.nix b/third_party/nixpkgs/pkgs/tools/misc/plocate/default.nix new file mode 100644 index 0000000000..faff84e52f --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/plocate/default.nix @@ -0,0 +1,45 @@ +{ stdenv +, lib +, fetchgit +, pkg-config +, meson +, ninja +, systemd +, liburing +, zstd +}: + +stdenv.mkDerivation rec { + pname = "plocate"; + version = "1.1.7"; + + src = fetchgit { + url = "https://git.sesse.net/plocate"; + rev = version; + sha256 = "sha256-5Ie4qgiKUoI9Kma6YvjXirvBbpbKVuaMSSAZa36zN3M="; + }; + + postPatch = '' + sed -i meson.build \ + -e "s@unitdir =.*@unitdir = '$out/lib/systemd/system'@" \ + -e '/mkdir\.sh/d' + ''; + + nativeBuildInputs = [ meson ninja pkg-config ]; + + buildInputs = [ systemd liburing zstd ]; + + mesonFlags = [ + # I don't know why we can't do this but instead have to resort to patching meson.build + # "-Dsystemdsystemunitdir=${placeholder "out"}/etc/systemd/system" + "-Dsharedstatedir=/var/lib" + ]; + + meta = with lib; { + description = "Much faster locate"; + homepage = "https://plocate.sesse.net/"; + license = licenses.mit; + maintainers = with maintainers; [ peterhoeg ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/powerline-rs/default.nix b/third_party/nixpkgs/pkgs/tools/misc/powerline-rs/default.nix index a8f57bd78c..7222ac9be7 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/powerline-rs/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/powerline-rs/default.nix @@ -26,7 +26,7 @@ rustPlatform.buildRustPackage rec { meta = with lib; { description = "powerline-shell rewritten in Rust, inspired by powerline-go"; license = licenses.mit; - maintainers = with maintainers; [ jD91mZM2 ]; + maintainers = with maintainers; [ ]; platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/tools/misc/profile-sync-daemon/default.nix b/third_party/nixpkgs/pkgs/tools/misc/profile-sync-daemon/default.nix index 0c8bb068ca..d0bd0c76a8 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/profile-sync-daemon/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/profile-sync-daemon/default.nix @@ -1,12 +1,12 @@ { lib, stdenv, fetchurl, util-linux, coreutils}: stdenv.mkDerivation rec { - version = "6.42"; + version = "6.44"; pname = "profile-sync-daemon"; src = fetchurl { url = "https://github.com/graysky2/profile-sync-daemon/archive/v${version}.tar.gz"; - sha256 = "1x47ydrwawkic5cgzp0ikd99g1hbpzc2aalq9z630vm13yw2adnp"; + sha256 = "sha256-+iQr7T99X/jYYgq0xNHLPCJG5mZU/6dN76Z1FB51Z54="; }; installPhase = '' diff --git a/third_party/nixpkgs/pkgs/tools/misc/remind/default.nix b/third_party/nixpkgs/pkgs/tools/misc/remind/default.nix index 293cc136c8..d10811ffa0 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/remind/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/remind/default.nix @@ -3,20 +3,18 @@ , fetchurl , tk , tcllib -, makeWrapper +, tcl , tkremind ? true }: let - inherit (lib) optional optionalString; - tclLibraries = lib.optionals tkremind [ tcllib tk ]; - tclLibPaths = lib.concatStringsSep " " - (map (p: "${p}/lib/${p.libPrefix}") tclLibraries); + inherit (lib) optional optionals optionalString; + tclLibraries = optionals tkremind [ tcllib tk ]; tkremindPatch = optionalString tkremind '' substituteInPlace scripts/tkremind --replace "exec wish" "exec ${tk}/bin/wish" ''; in -stdenv.mkDerivation rec { +tcl.mkTclDerivation rec { pname = "remind"; version = "03.03.06"; @@ -25,7 +23,6 @@ stdenv.mkDerivation rec { sha256 = "sha256-lpoMAXDJxwODY0/aoo25GRBYWFhE4uf11pR5/ITZX1s="; }; - nativeBuildInputs = optional tkremind makeWrapper; propagatedBuildInputs = tclLibraries; postPatch = '' @@ -37,10 +34,6 @@ stdenv.mkDerivation rec { ${tkremindPatch} ''; - postInstall = optionalString tkremind '' - wrapProgram $out/bin/tkremind --set TCLLIBPATH "${tclLibPaths}" - ''; - meta = with lib; { homepage = "https://dianne.skoll.ca/projects/remind/"; description = "Sophisticated calendar and alarm program for the console"; diff --git a/third_party/nixpkgs/pkgs/tools/misc/s6-portable-utils/default.nix b/third_party/nixpkgs/pkgs/tools/misc/s6-portable-utils/default.nix index 731f6c4878..d6f475a408 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/s6-portable-utils/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/s6-portable-utils/default.nix @@ -2,13 +2,10 @@ with skawarePackages; -let +buildPackage { pname = "s6-portable-utils"; - -in buildPackage { - pname = pname; - version = "2.2.3.1"; - sha256 = "1ks1ch5v3p2z8y8wp5fmzzgjrqn2l5sj1sgfp8vv6wy8psd8mrj3"; + version = "2.2.3.2"; + sha256 = "173nmygkp7ky3093dg4rx3ahvyl7ll86z8qj6pl3jd96xb9s49v6"; description = "A set of tiny general Unix utilities optimized for simplicity and small size"; @@ -28,7 +25,7 @@ in buildPackage { rm $(find -name "s6-*" -type f -mindepth 1 -maxdepth 1 -executable) rm seekablepipe - mv doc $doc/share/doc/${pname}/html + mv doc $doc/share/doc/s6-portable-utils/html ''; diff --git a/third_party/nixpkgs/pkgs/tools/misc/silicon/default.nix b/third_party/nixpkgs/pkgs/tools/misc/silicon/default.nix index ae58054511..40586f6be6 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/silicon/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/silicon/default.nix @@ -18,16 +18,16 @@ rustPlatform.buildRustPackage rec { pname = "silicon"; - version = "0.4.1"; + version = "0.4.2"; src = fetchFromGitHub { owner = "Aloxaf"; repo = "silicon"; rev = "v${version}"; - sha256 = "sha256-ci0gq4rOQHBmFPvhXZseIlwnqAWd06/qg/i/luhV79s="; + sha256 = "sha256-k+p8AEEL1BBJTmPc58QoIk7EOzu8QKdG00RQ58EN3bg="; }; - cargoSha256 = "sha256-sUPOf9er+BOMqDJ8C6+Xjjqj6NQUV2JTzGA4yUWtDWM="; + cargoSha256 = "sha256-vpegobS7lpRkt/oZePW9WggYeg0JXDte8fQP/bf7oAI="; buildInputs = [ llvmPackages.libclang expat freetype fira-code ] ++ lib.optionals stdenv.isLinux [ libxcb ] diff --git a/third_party/nixpkgs/pkgs/tools/misc/slop/default.nix b/third_party/nixpkgs/pkgs/tools/misc/slop/default.nix index a4a65e37e4..a73dd8d3cb 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/slop/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/slop/default.nix @@ -25,6 +25,6 @@ stdenv.mkDerivation rec { description = "Queries a selection from the user and prints to stdout"; platforms = lib.platforms.linux; license = lib.licenses.gpl3Plus; - maintainers = with maintainers; [ primeos mbakke ]; + maintainers = with maintainers; [ ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/misc/starship/default.nix b/third_party/nixpkgs/pkgs/tools/misc/starship/default.nix index 432eab680c..f5f8f87e9c 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/starship/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/starship/default.nix @@ -11,13 +11,13 @@ rustPlatform.buildRustPackage rec { pname = "starship"; - version = "0.54.0"; + version = "0.55.0"; src = fetchFromGitHub { owner = "starship"; repo = pname; rev = "v${version}"; - sha256 = "sha256-8vrLvP8NevVpmqxqJHsySGXRTDX45c8FrfB7W7fdQvg="; + sha256 = "sha256-zXXjy90oxLO/Ac/TQC4J6rOvha2qGBMv0SAAXvDyITo="; }; nativeBuildInputs = [ installShellFiles ] ++ lib.optionals stdenv.isLinux [ pkg-config ]; @@ -32,7 +32,7 @@ rustPlatform.buildRustPackage rec { done ''; - cargoSha256 = "sha256-lIZsYhyef9LsGME01Kb5TGamGpLyZiPrdIb+jUqvbOg="; + cargoSha256 = "sha256-TXmV1saqZ/XS4HxKpGXWu3HuoZ3WIptSc8oTNnPCqYE="; preCheck = '' HOME=$TMPDIR diff --git a/third_party/nixpkgs/pkgs/tools/misc/staruml/default.nix b/third_party/nixpkgs/pkgs/tools/misc/staruml/default.nix index db3a065fdf..847e8bb842 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/staruml/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/staruml/default.nix @@ -1,11 +1,11 @@ { stdenv, lib, fetchurl, makeWrapper , dpkg, patchelf -, gtk2, glib, gdk-pixbuf, alsaLib, nss, nspr, GConf, cups, libgcrypt, dbus, systemd +, gtk2, glib, gdk-pixbuf, alsa-lib, nss, nspr, GConf, cups, libgcrypt, dbus, systemd , libXdamage, expat }: let LD_LIBRARY_PATH = lib.makeLibraryPath - [ glib gtk2 gdk-pixbuf alsaLib nss nspr GConf cups libgcrypt dbus libXdamage expat ]; + [ glib gtk2 gdk-pixbuf alsa-lib nss nspr GConf cups libgcrypt dbus libXdamage expat ]; in stdenv.mkDerivation rec { version = "2.8.1"; diff --git a/third_party/nixpkgs/pkgs/tools/misc/sutils/default.nix b/third_party/nixpkgs/pkgs/tools/misc/sutils/default.nix index 78172c5ef7..f611b7adc0 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/sutils/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/sutils/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, alsaLib }: +{ lib, stdenv, fetchFromGitHub, alsa-lib }: stdenv.mkDerivation rec { version = "0.2"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { hardeningDisable = [ "format" ]; - buildInputs = [ alsaLib ]; + buildInputs = [ alsa-lib ]; prePatch = ''sed -i "s@/usr/local@$out@" Makefile''; diff --git a/third_party/nixpkgs/pkgs/tools/misc/svtplay-dl/default.nix b/third_party/nixpkgs/pkgs/tools/misc/svtplay-dl/default.nix index 1d78759761..0e91b9c0e5 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/svtplay-dl/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/svtplay-dl/default.nix @@ -4,22 +4,23 @@ let inherit (python3Packages) - python nose cryptography pyyaml requests mock python-dateutil setuptools; + python pytest nose cryptography pyyaml requests mock python-dateutil setuptools; in stdenv.mkDerivation rec { pname = "svtplay-dl"; - version = "3.7"; + version = "4.0"; src = fetchFromGitHub { owner = "spaam"; repo = "svtplay-dl"; rev = version; - sha256 = "0krskxbmlglkipqzjwgm2nmq118m8l0djgh0f8l6n2w3bjblhyfx"; + sha256 = "01q03v6a2rkw49z5nbm5mghm0qmmm12pq3amsiiiv5j6m9p0fdsy"; }; pythonPaths = [ cryptography pyyaml requests ]; - buildInputs = [ python perl nose mock python-dateutil setuptools ] ++ pythonPaths; + buildInputs = [ python perl mock python-dateutil setuptools ] ++ pythonPaths; nativeBuildInputs = [ gitMinimal zip makeWrapper ]; + checkInputs = [ nose pytest ]; postPatch = '' substituteInPlace scripts/run-tests.sh \ diff --git a/third_party/nixpkgs/pkgs/tools/misc/sweep-visualizer/default.nix b/third_party/nixpkgs/pkgs/tools/misc/sweep-visualizer/default.nix index 12168bd07f..1ead06ed6e 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/sweep-visualizer/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/sweep-visualizer/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, makeWrapper, fetchurl, - alsaLib, atk, cairo, cups, dbus, expat, fontconfig, freetype, gdk-pixbuf, glib, + alsa-lib, atk, cairo, cups, dbus, expat, fontconfig, freetype, gdk-pixbuf, glib, gnome2, pango, gtk2-x11, nspr, nss, libX11, libxcb, libXcomposite, libXcursor, libXdamage, libXext, libXfixes, libXi, libXrandr, libXrender, libXScrnSaver, libXtst, @@ -32,7 +32,7 @@ preFixup = let libPath = lib.makeLibraryPath [ - alsaLib atk cairo cups.lib dbus.lib expat fontconfig.lib freetype + alsa-lib atk cairo cups.lib dbus.lib expat fontconfig.lib freetype gdk-pixbuf glib gnome2.GConf pango gtk2-x11 nspr nss stdenv.cc.cc.lib libX11 libxcb libXcomposite libXcursor libXdamage libXext libXfixes libXi libXrandr libXrender libXScrnSaver libXtst diff --git a/third_party/nixpkgs/pkgs/tools/misc/termplay/default.nix b/third_party/nixpkgs/pkgs/tools/misc/termplay/default.nix index 5db3998409..80c6341f02 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/termplay/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/termplay/default.nix @@ -32,7 +32,7 @@ rustPlatform.buildRustPackage rec { description = "Play an image/video in your terminal"; homepage = "https://jd91mzm2.github.io/termplay/"; license = licenses.mit; - maintainers = with maintainers; [ jD91mZM2 ]; + maintainers = with maintainers; [ ]; platforms = platforms.unix; }; } diff --git a/third_party/nixpkgs/pkgs/tools/misc/tfk8s/default.nix b/third_party/nixpkgs/pkgs/tools/misc/tfk8s/default.nix index ebe1f056f4..e6fc7bf3f7 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/tfk8s/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/tfk8s/default.nix @@ -2,13 +2,14 @@ buildGoModule rec { pname = "tfk8s"; - version = "0.1.3"; + version = "0.1.4"; + tag = "v${version}"; src = fetchFromGitHub { owner = "jrhouston"; repo = "tfk8s"; - rev = "v${version}"; - sha256 = "sha256-3iI5gYfpkxfVylBgniaMeQ73uR8dAjVrdg/eBLRxUR4"; + rev = tag; + sha256 = "sha256-Ha/F8rCGZqFYqJzfemmKRyEBI5khaSIerJxvf2Pf2ao="; }; vendorSha256 = "sha256-wS5diDQFkt8IAp13d8Yeh8ihLvKWdR0Mbw0fMZpqqKE="; @@ -18,12 +19,19 @@ buildGoModule rec { "-ldflags=" "-s" "-w" - "-X main.toolVersion=${version}" + "-X main.toolVersion=${tag}" "-X main.builtBy=nixpkgs" ]; + doCheck = true; + + doInstallCheck = true; + installCheckPhase = '' + $out/bin/tfk8s --version | grep ${tag} > /dev/null + ''; + meta = with lib; { - description = "An utility to convert Kubernetes YAML manifests to Terraform's HCL format."; + description = "An utility to convert Kubernetes YAML manifests to Terraform's HCL format"; license = licenses.mit; longDescription = '' tfk8s is a tool that makes it easier to work with the Terraform Kubernetes Provider. diff --git a/third_party/nixpkgs/pkgs/tools/misc/thefuck/default.nix b/third_party/nixpkgs/pkgs/tools/misc/thefuck/default.nix index ff6a22cef8..7ede307a86 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/thefuck/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/thefuck/default.nix @@ -5,13 +5,13 @@ buildPythonApplication rec { pname = "thefuck"; - version = "3.30"; + version = "3.31"; src = fetchFromGitHub { owner = "nvbn"; repo = pname; rev = version; - sha256 = "0fnf78956pwhb9cgv1jmgypnkma5xzflkivfrkfiadbgin848yfg"; + sha256 = "sha256-eKKUUJr00sUtT4u91MUgJjyPOXp3NigYVfYUP/sDBhY="; }; propagatedBuildInputs = [ colorama decorator psutil pyte six ]; diff --git a/third_party/nixpkgs/pkgs/tools/misc/timidity/default.nix b/third_party/nixpkgs/pkgs/tools/misc/timidity/default.nix index 63c4fd36ff..760284140b 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/timidity/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/timidity/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, alsaLib, libjack2, ncurses, pkg-config }: +{ lib, stdenv, fetchurl, alsa-lib, libjack2, ncurses, pkg-config }: stdenv.mkDerivation { name = "timidity-2.15.0"; @@ -11,7 +11,7 @@ stdenv.mkDerivation { patches = [ ./timidity-iA-Oj.patch ]; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ alsaLib libjack2 ncurses ]; + buildInputs = [ alsa-lib libjack2 ncurses ]; configureFlags = [ "--enable-audio=oss,alsa,jack" "--enable-alsaseq" "--with-default-output=alsa" "--enable-ncurses" ]; diff --git a/third_party/nixpkgs/pkgs/tools/misc/tmux/default.nix b/third_party/nixpkgs/pkgs/tools/misc/tmux/default.nix index 629cf548c2..90273068f3 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/tmux/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/tmux/default.nix @@ -21,7 +21,7 @@ in stdenv.mkDerivation rec { pname = "tmux"; - version = "3.2"; + version = "3.2a"; outputs = [ "out" "man" ]; @@ -29,15 +29,14 @@ stdenv.mkDerivation rec { owner = "tmux"; repo = "tmux"; rev = version; - sha256 = "0alq81h1rz1f0zsy8qb2dvsl47axpa86j4bplngwkph0ksqqgr3p"; + sha256 = "0143ylfk7zsl3xmiasb768238gr582cfhsgv3p0h0f13bp8d6q09"; }; patches = [ - # Fix cross-compilation - # https://github.com/tmux/tmux/pull/2651 + # See https://github.com/tmux/tmux/pull/2755 (fetchpatch { - url = "https://github.com/tmux/tmux/commit/bb6242675ad0c7447daef148fffced882e5b4a61.patch"; - sha256 = "1acr3xv3gqpq7qa2f8hw7c4f42hi444lfm1bz6wqj8f3yi320zjr"; + url = "https://github.com/tmux/tmux/commit/d0a2683120ec5a33163a14b0e1b39d208745968f.patch"; + sha256 = "070knpncxfxi6k4q64jwi14ns5vm3606cf402h1c11cwnaa84n1g"; }) ]; diff --git a/third_party/nixpkgs/pkgs/tools/misc/topgrade/default.nix b/third_party/nixpkgs/pkgs/tools/misc/topgrade/default.nix index 42624df8a0..7677a75673 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/topgrade/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/topgrade/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "topgrade"; - version = "6.9.1"; + version = "7.0.1"; src = fetchFromGitHub { owner = "r-darwish"; repo = pname; rev = "v${version}"; - sha256 = "sha256-FaN1/S/VzHnaQp+UOmvNGaWDEFijVEI7GWkAmnln3jE="; + sha256 = "sha256-86lBEtwybHrcm7G0ZIbfOHSZPBzNERHGqrTR4YbpDnE="; }; - cargoSha256 = "sha256-Vq2gorQJbLfxKWKbYYOVaHPN0uITbGs1CgkwBtPwSrk="; + cargoSha256 = "sha256-yZIh01A1yC1ZeDDyXeh1C3abPfbW2JuJ7TIsVO1weZk="; buildInputs = lib.optional stdenv.isDarwin Foundation; diff --git a/third_party/nixpkgs/pkgs/tools/misc/trash-cli/default.nix b/third_party/nixpkgs/pkgs/tools/misc/trash-cli/default.nix index 3a525ac949..ff218eb108 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/trash-cli/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/trash-cli/default.nix @@ -2,13 +2,13 @@ python3Packages.buildPythonApplication rec { pname = "trash-cli"; - version = "0.21.5.22"; + version = "0.21.6.10.1"; src = fetchFromGitHub { owner = "andreafrancia"; repo = "trash-cli"; rev = version; - sha256 = "0c1q13fyh9gi9gbxc55n772xlgjjr1ysnlxl41vifdcd4q8fhil8"; + sha256 = "0mhpzf3vmd876aldl5gazmk4si0zvrh0v1rwsz2hbrn0571zmzy9"; }; propagatedBuildInputs = [ python3Packages.psutil ]; diff --git a/third_party/nixpkgs/pkgs/tools/misc/usbmuxd/default.nix b/third_party/nixpkgs/pkgs/tools/misc/usbmuxd/default.nix index d001db4d3c..96b82a8a20 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/usbmuxd/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/usbmuxd/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "usbmuxd"; - version = "1.1.1"; + version = "unstable-2021-05-08"; src = fetchFromGitHub { owner = "libimobiledevice"; repo = pname; - rev = version; - sha256 = "0a2xgrb4b3ndam448z74wh1267nmrz1wcbpx4xz86pwbdc93snab"; + rev = "5e484e18f1383b5a0bd6c353ab1d668b03e4ffab"; + sha256 = "sha256-hhbfRmLEhVVuJNnw65PakPnvjSCrN3oSMK6D7Zwnw60="; }; nativeBuildInputs = [ autoreconfHook pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/tools/misc/vector/default.nix b/third_party/nixpkgs/pkgs/tools/misc/vector/default.nix index 161c28054b..e8c3ed7cbe 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/vector/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/vector/default.nix @@ -2,41 +2,57 @@ , lib , fetchFromGitHub , rustPlatform -, openssl , pkg-config +, llvmPackages +, openssl , protobuf +, rdkafka +, oniguruma +, zstd , Security , libiconv -, rdkafka -, tzdata , coreutils , CoreServices -, features ? ([ "jemallocator" "rdkafka" "rdkafka/dynamic_linking" ] - ++ (lib.optional stdenv.targetPlatform.isUnix "unix") - ++ [ "sinks" "sources" "transforms" ]) +, tzdata + # kafka is optional but one of the most used features +, enableKafka ? true + # TODO investigate adding "api" "api-client" "vrl-cli" and various "vendor-*" + # "disk-buffer" is using leveldb TODO: investigate how useful + # it would be, perhaps only for massive scale? +, features ? ([ "sinks" "sources" "transforms" ] + # the second feature flag is passed to the rdkafka dependency + # building on linux fails without this feature flag (both x86_64 and AArch64) + ++ (lib.optionals enableKafka [ "rdkafka-plain" "rdkafka/dynamic_linking" ]) + ++ (lib.optional stdenv.targetPlatform.isUnix "unix")) }: rustPlatform.buildRustPackage rec { pname = "vector"; - version = "0.13.1"; + version = "0.14.0"; src = fetchFromGitHub { owner = "timberio"; repo = pname; rev = "v${version}"; - sha256 = "sha256-ige0138alZ0KAmPakPVmDVydz5qco6m0xK7AEzScyXc="; + sha256 = "sha256-wtihrR19jMJ7Kgvy6XBzOUrC/WKNVl2MVx4lWgXYlvg="; }; - cargoSha256 = "sha256-oK4M6zTfI0QVW9kQTgpP/vSxFt2VlRABmKvQ4aAqC74="; + cargoSha256 = "sha256-VYIzAqh5Xxmn1koxhh+UDb2G3WS2UVXffuBY7h5Kr7A="; nativeBuildInputs = [ pkg-config ]; - buildInputs = [ openssl protobuf rdkafka ] + buildInputs = [ oniguruma openssl protobuf rdkafka zstd ] ++ lib.optional stdenv.isDarwin [ Security libiconv coreutils CoreServices ]; # needed for internal protobuf c wrapper library PROTOC = "${protobuf}/bin/protoc"; PROTOC_INCLUDE = "${protobuf}/include"; + RUSTONIG_SYSTEM_LIBONIG = true; + LIBCLANG_PATH = "${llvmPackages.libclang.lib}/lib"; cargoBuildFlags = [ "--no-default-features" "--features" (lib.concatStringsSep "," features) ]; + # TODO investigate compilation failure for tests + # dev dependency includes httpmock which depends on iashc which depends on curl-sys with http2 feature enabled + # compilation fails because of a missing http2 include + doCheck = !stdenv.isDarwin; checkPhase = "TZDIR=${tzdata}/share/zoneinfo cargo test --no-default-features --features ${lib.concatStringsSep "," features} -- --test-threads 1"; # recent overhauls of DNS support in 0.9 mean that we try to resolve diff --git a/third_party/nixpkgs/pkgs/tools/misc/veikk-linux-driver-gui/default.nix b/third_party/nixpkgs/pkgs/tools/misc/veikk-linux-driver-gui/default.nix index e216823f7a..a833846dd0 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/veikk-linux-driver-gui/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/veikk-linux-driver-gui/default.nix @@ -25,7 +25,7 @@ mkDerivation rec { meta = with lib; { description = "Configuration tool for the VEIKK Linux driver"; homepage = "https://github.com/jlam55555/veikk-linux-driver-gui/"; - license = licenses.unfree; + license = licenses.gpl2Only; platforms = platforms.linux; maintainers = with maintainers; [ nicbk ]; }; diff --git a/third_party/nixpkgs/pkgs/tools/misc/vivid/default.nix b/third_party/nixpkgs/pkgs/tools/misc/vivid/default.nix index ef7bd00f0e..d0a6114316 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/vivid/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/vivid/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "vivid"; - version = "0.6.0"; + version = "0.7.0"; src = fetchFromGitHub { owner = "sharkdp"; repo = pname; rev = "v${version}"; - sha256 = "0m928hy2q8byfpm55nziiz86gcnhdnw3zpj78d8wx0pp318zjbla"; + sha256 = "sha256-2rdNjpJrBuj6toLFzFJScNh6od5qUhkSaZF+NbPBlQA="; }; - cargoSha256 = "1sn1cq3kaswnz2z9q5h84qipp64ha7jv5kix31lm7v6nam0f5awz"; + cargoSha256 = "sha256-1aox1eiF3hu5guBjRcM3qb6mHJOutI+yargW7X4cFfg="; meta = with lib; { description = "A generator for LS_COLORS with support for multiple color themes"; diff --git a/third_party/nixpkgs/pkgs/tools/misc/vsh/default.nix b/third_party/nixpkgs/pkgs/tools/misc/vsh/default.nix index a94c58368a..13a3df4d6b 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/vsh/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/vsh/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "vsh"; - version = "0.11.0"; + version = "0.12.0"; src = fetchFromGitHub { owner = "fishi0x01"; repo = "vsh"; rev = "v${version}"; - sha256 = "0dhn2aqd52fgasy4j3ar67fzwzcxfi1vl09kni8jwcna8rjgg3fj"; + sha256 = "059zzsg94287sxlk5clz6in7jscqaq530c84xqgy537f6cq3vr2p"; }; # vendor directory is part of repository diff --git a/third_party/nixpkgs/pkgs/tools/misc/yafetch/default.nix b/third_party/nixpkgs/pkgs/tools/misc/yafetch/default.nix index c3bea1d9e8..8dad93d0de 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/yafetch/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/yafetch/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "yafetch"; - version = "unstable-2021-06-01"; + version = "unstable-2021-06-15"; src = fetchFromGitLab { owner = "cyberkitty"; repo = pname; - rev = "d9bbc1e4abca87028f898473c9a265161af3c287"; - sha256 = "0hyb5k7drnm9li720z1fdvz7b15xgf7n6yajnz1j98day3k88bqk"; + rev = "423a7d1f1ef8f0e4caf586710828620d3cb593e3"; + sha256 = "184yy7i8ca2fh6d1rxyhxi9gqb57fpz7ia0i56dl1zhg769m8b99"; }; # Use the provided NixOS logo automatically @@ -24,7 +24,7 @@ stdenv.mkDerivation rec { homepage = "https://gitlab.com/cyberkitty/yafetch"; description = "Yet another fetch clone written in C++"; license = licenses.gpl2Only; - maintainers = [ maintainers.ivar ]; + maintainers = with maintainers; [ ivar ashley ]; platforms = platforms.linux; }; } diff --git a/third_party/nixpkgs/pkgs/tools/misc/ytfzf/default.nix b/third_party/nixpkgs/pkgs/tools/misc/ytfzf/default.nix index 302839a303..a35e9200a7 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/ytfzf/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/ytfzf/default.nix @@ -16,13 +16,13 @@ stdenv.mkDerivation rec { pname = "ytfzf"; - version = "1.1.6"; + version = "1.2.0"; src = fetchFromGitHub { owner = "pystardust"; repo = "ytfzf"; rev = "v${version}"; - sha256 = "sha256-HXn/8Lrt6tNZWW1AeKMArOiW9t1v7MzlynSLryNdI5Y="; + sha256 = "sha256-3wbjCtRmnd9tm8kqKaIF6VmMdKsWznhOvQkEsrAJpAE="; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/tools/misc/ytfzf/no-update.patch b/third_party/nixpkgs/pkgs/tools/misc/ytfzf/no-update.patch index e023914083..e71582f636 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/ytfzf/no-update.patch +++ b/third_party/nixpkgs/pkgs/tools/misc/ytfzf/no-update.patch @@ -1,8 +1,8 @@ diff --git a/ytfzf b/ytfzf -index d5ff8c9..96f9c8f 100755 +index f4d2e0d..7a3b4b6 100755 --- a/ytfzf +++ b/ytfzf -@@ -934,23 +934,8 @@ send_notify () { +@@ -1260,22 +1260,8 @@ EOF } update_ytfzf () { @@ -12,19 +12,18 @@ index d5ff8c9..96f9c8f 100755 - - if sed -n '1p' < "$updatefile" | grep -q '#!/bin/sh'; then - chmod 755 "$updatefile" -- if [ "$(uname)" = "Darwin" ]; then -- sudo cp "$updatefile" "/usr/local/bin/ytfzf" -- else -- sudo cp "$updatefile" "/usr/bin/ytfzf" -- fi +- [ "$(uname)" = "Darwin" ] && prefix="/usr/local/bin" || prefix="/usr/bin" +- function_exists "sudo" && doasroot="sudo" || doasroot="doas" +- $doasroot cp "$updatefile" "$prefix/ytfzf" +- unset prefix doasroot - else - printf "%bFailed to update ytfzf. Try again later.%b" "$c_red" "$c_reset" - fi - - rm "$updatefile" -- exit +- exit 0 + printf "%bUpdates have to be installed through Nix.%b\n" "$c_red" "$c_reset" + exit 1 } - sort_video_data_date () { + #gives a value to sort by (this will give the unix time the video was uploaded) diff --git a/third_party/nixpkgs/pkgs/tools/misc/ytmdl/default.nix b/third_party/nixpkgs/pkgs/tools/misc/ytmdl/default.nix new file mode 100644 index 0000000000..694ee44d5f --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/misc/ytmdl/default.nix @@ -0,0 +1,52 @@ +{ lib, fetchFromGitHub, buildPythonApplication, ffmpeg, ffmpeg-python, musicbrainzngs, rich, simber +, pydes, youtube-search, unidecode, pyxdg, downloader-cli, beautifulsoup4, itunespy, mutagen, pysocks +, youtube-dl, ytmusicapi +}: + +buildPythonApplication rec { + pname = "ytmdl"; + version = "2021.06.26"; + + src = fetchFromGitHub { + owner = "deepjyoti30"; + repo = pname; + rev = version; + sha256 = "1jpd5zhqg2m9vjjjw4mgzb594q1v1pq1yl65py6kw42bq9w5yl5p"; + }; + + postPatch = '' + substituteInPlace setup.py \ + --replace "bs4" "beautifulsoup4" + ''; + + + propagatedBuildInputs = [ + ffmpeg + ffmpeg-python + musicbrainzngs + rich + simber + pydes + youtube-search + unidecode + pyxdg + downloader-cli + beautifulsoup4 + itunespy + mutagen + pysocks + youtube-dl + ytmusicapi + ]; + + # This application has no tests + doCheck = false; + + meta = with lib; { + homepage = "https://github.com/deepjyoti30/ytmdl"; + description = "YouTube Music Downloader"; + license = licenses.mit; + platforms = platforms.all; + maintainers = with maintainers; [ j0hax ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/misc/yubikey-manager/default.nix b/third_party/nixpkgs/pkgs/tools/misc/yubikey-manager/default.nix index 12b3aa0f05..ed4f76fa62 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/yubikey-manager/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/yubikey-manager/default.nix @@ -3,11 +3,11 @@ python3Packages.buildPythonPackage rec { pname = "yubikey-manager"; - version = "4.0.1"; + version = "4.0.3"; srcs = fetchurl { url = "https://developers.yubico.com/${pname}/Releases/${pname}-${version}.tar.gz"; - hash = "sha256-OxbKo5vwOBabU6/2hO4RMWiifo4IVIxz+DlcwP9xO/E="; + hash = "sha256-p7tv/bj6PMCnCU5j8Vhi60LxLiPmR1Cuf8xVdDVtZvQ="; }; propagatedBuildInputs = diff --git a/third_party/nixpkgs/pkgs/tools/misc/zoxide/default.nix b/third_party/nixpkgs/pkgs/tools/misc/zoxide/default.nix index 30b9c49690..a28cf27ab1 100644 --- a/third_party/nixpkgs/pkgs/tools/misc/zoxide/default.nix +++ b/third_party/nixpkgs/pkgs/tools/misc/zoxide/default.nix @@ -10,13 +10,13 @@ rustPlatform.buildRustPackage rec { pname = "zoxide"; - version = "0.7.0"; + version = "0.7.2"; src = fetchFromGitHub { owner = "ajeetdsouza"; repo = "zoxide"; rev = "v${version}"; - sha256 = "sha256-yunKyCjJ/vWUcsodweLmxv0+QJQI2i5u5VIzp2U+VyU="; + sha256 = "sha256-M83J28aG4NACBZtCJzYNU7aYNTJILAboaDv5aAo35OM="; }; nativeBuildInputs = [ installShellFiles ]; @@ -28,10 +28,14 @@ rustPlatform.buildRustPackage rec { --replace '"fzf"' '"${fzf}/bin/fzf"' ''; - cargoSha256 = "sha256-eoal6z4wX1pNdAJfdamJgOSFCvGWdbVlq1X+vD9lraE="; + cargoSha256 = "sha256-aF0vdudOFBcDrHpgsS7+HNE70GTNPdBOmbvQhLwmsM0="; postInstall = '' installManPage man/* + installShellCompletion --cmd zoxide \ + --bash contrib/completions/zoxide.bash \ + --fish contrib/completions/zoxide.fish \ + --zsh contrib/completions/_zoxide ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/tools/networking/boundary/default.nix b/third_party/nixpkgs/pkgs/tools/networking/boundary/default.nix index 32dcea9682..ab26a39035 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/boundary/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/boundary/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { pname = "boundary"; - version = "0.2.3"; + version = "0.3.0"; src = let @@ -14,9 +14,9 @@ stdenv.mkDerivation rec { x86_64-darwin = "darwin_amd64"; }; sha256 = selectSystem { - x86_64-linux = "sha256-tfTyhuQaVh0F1HvFS+ToDk/lJEHEYMQVNFpdEjABer4="; - aarch64-linux = "sha256-0g6nYoNgu3C/r4fgKuZBrzTjpt14lQf2rpbVMS9CEZE="; - x86_64-darwin = "sha256-er1bDqi+PDucwUSsWDi8z1fUZTz7epq6HE6cOLTN3SE="; + x86_64-linux = "sha256-vBXNDd9p9g1joBMcwt87uI/EIAeKa+QrndCh1kTwZyM="; + aarch64-linux = "sha256-Xompe1Q8Q3gAqpQQT04CWDx/f0Yc8HbnkZQbN+faB0g="; + x86_64-darwin = "sha256-cE4YrZPNAldCR31O3gI4W/y4RgV7+64yL15obb5uRcY="; }; in fetchzip { diff --git a/third_party/nixpkgs/pkgs/tools/networking/burpsuite/default.nix b/third_party/nixpkgs/pkgs/tools/networking/burpsuite/default.nix index a42746c6fa..53d1a3d4f2 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/burpsuite/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/burpsuite/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { pname = "burpsuite"; - version = "2021.5.1"; + version = "2021.6"; src = fetchurl { name = "burpsuite.jar"; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { "https://portswigger.net/Burp/Releases/Download?productId=100&version=${version}&type=Jar" "https://web.archive.org/web/https://portswigger.net/Burp/Releases/Download?productId=100&version=${version}&type=Jar" ]; - sha256 = "sha256-nPz6IZpXCyg6cg2nuyqK2f5BI4dNb5tA2NriH3ZC198="; + sha256 = "sha256-DPUi/KRnJkwrc7KMq10+LE6+MX9yJLgrgIHKhlfL+vc="; }; dontUnpack = true; diff --git a/third_party/nixpkgs/pkgs/tools/networking/cocom/default.nix b/third_party/nixpkgs/pkgs/tools/networking/cocom/default.nix new file mode 100644 index 0000000000..f4a896af7d --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/networking/cocom/default.nix @@ -0,0 +1,32 @@ +{ lib +, stdenv +, fetchFromGitHub +, rustPlatform +, Security +}: + +rustPlatform.buildRustPackage rec { + pname = "cocom"; + version = "1.1.3"; + + src = fetchFromGitHub { + owner = "LamdaLamdaLamda"; + repo = pname; + rev = "v${version}"; + sha256 = "0sl4ivn95sr5pgw2z877gmhyfc4mk9xr457i5g2i4wqnf2jmy14j"; + }; + + cargoSha256 = "04kj1yj6hhnis3ss0xs4zq8rl71rzn577g8i0wmapkjqzqwg37yb"; + + buildInputs = lib.optional stdenv.isDarwin Security; + + # Tests require network access + doCheck = false; + + meta = with lib; { + description = "NTP client"; + homepage = "https://github.com/LamdaLamdaLamda/cocom"; + license = licenses.gpl3Only; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/networking/connman/connman.nix b/third_party/nixpkgs/pkgs/tools/networking/connman/connman.nix index c6792ecfd3..3ec9bce0b4 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/connman/connman.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/connman/connman.nix @@ -55,10 +55,10 @@ let inherit (lib) optionals; in stdenv.mkDerivation rec { pname = "connman"; - version = "1.39"; + version = "1.40"; src = fetchurl { url = "mirror://kernel/linux/network/connman/${pname}-${version}.tar.xz"; - sha256 = "sha256-n2KnFpt0kcZwof8uM1sNlmMI+y9i4oXHgRBeuQ8YGvM="; + sha256 = "sha256-GleufOI0qjoXRKrDvlwhIdmNzpmUQO+KucxO39XtyxI="; }; buildInputs = [ @@ -67,7 +67,7 @@ stdenv.mkDerivation rec { libmnl gnutls readline - ]; + ] ++ optionals (enableOpenconnect) [ openconnect ]; nativeBuildInputs = [ pkg-config diff --git a/third_party/nixpkgs/pkgs/tools/networking/corerad/default.nix b/third_party/nixpkgs/pkgs/tools/networking/corerad/default.nix index f5b0875e6f..341e1c1333 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/corerad/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/corerad/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "corerad"; - version = "0.3.1"; + version = "0.3.2"; src = fetchFromGitHub { owner = "mdlayher"; repo = "corerad"; rev = "v${version}"; - sha256 = "0ky4zfmxzgxidsizfj2lwm5z3zl666khw9cgsxfgbzn3cjgr33c3"; + sha256 = "1avbd0ldmzzkfay2pm6b88aln388cj8z7dzyw6i8m5k0lmmmmz9y"; }; - vendorSha256 = "0ddni8hl8fv0m9kinwfnhcj3k51fk8h61yksv7ws6agdx0bl1rwh"; + vendorSha256 = "0cd6h5d4yjn86q296qp6lgxcykci1233s4s2fp8m0l3ywss69fck"; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/tools/networking/croc/default.nix b/third_party/nixpkgs/pkgs/tools/networking/croc/default.nix index 66c5598d02..001ee1c725 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/croc/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/croc/default.nix @@ -1,17 +1,17 @@ -{ lib, buildGoModule, fetchFromGitHub, callPackage}: +{ lib, buildGoModule, fetchFromGitHub, callPackage }: buildGoModule rec { pname = "croc"; - version = "9.1.4"; + version = "9.2.0"; src = fetchFromGitHub { owner = "schollz"; repo = pname; rev = "v${version}"; - sha256 = "16HmRluhqCr6Gt+x8PSCU4W9pUJp89l4GO29uI+ZzkI="; + sha256 = "sha256-wEgR/4t2NRqdlAtHS41sACSNZpDY+4IEaeftCgRpEEk="; }; - vendorSha256 = "sha256-f0KiXHspGX96k5ViCwI62Qs+rHowpqm+gLy7/iqdnE4="; + vendorSha256 = "sha256-YwMqIbxj6ldYBjLb3Gs96oOHM2Li4Qq8PEMeYtrcSnE="; doCheck = false; @@ -19,16 +19,11 @@ buildGoModule rec { passthru = { tests = { - local-relay = callPackage ./test-local-relay.nix {}; + local-relay = callPackage ./test-local-relay.nix { }; }; }; meta = with lib; { - description = - "Easily and securely send things from one computer to another"; - homepage = "https://github.com/schollz/croc"; - license = licenses.mit; - maintainers = with maintainers; [ hugoreeves equirosa ]; - + description = "Easily and securely send things from one computer to another"; longDescription = '' Croc is a command line tool written in Go that allows any two computers to simply and securely transfer files and folders. @@ -41,5 +36,8 @@ buildGoModule rec { - Allows resuming transfers that are interrupted - Does not require a server or port-forwarding ''; + homepage = "https://github.com/schollz/croc"; + license = licenses.mit; + maintainers = with maintainers; [ hugoreeves equirosa SuperSandro2000 ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/networking/croc/test-local-relay.nix b/third_party/nixpkgs/pkgs/tools/networking/croc/test-local-relay.nix index 4ddad86bd0..bdcecb6b54 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/croc/test-local-relay.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/croc/test-local-relay.nix @@ -12,8 +12,7 @@ stdenv.mkDerivation { ${croc}/bin/croc --relay localhost:11111 send --code correct-horse-battery-staple --text "$MSG" & # wait for things to settle sleep 1 - # receive, as of croc 9 --overwrite is required for noninteractive use - MSG2=$(${croc}/bin/croc --overwrite --relay localhost:11111 --yes correct-horse-battery-staple) + MSG2=$(${croc}/bin/croc --relay localhost:11111 --yes correct-horse-battery-staple) # compare [ "$MSG" = "$MSG2" ] && touch $out ''; diff --git a/third_party/nixpkgs/pkgs/tools/networking/curl/CVE-2021-22897.patch b/third_party/nixpkgs/pkgs/tools/networking/curl/CVE-2021-22897.patch new file mode 100644 index 0000000000..a488887950 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/networking/curl/CVE-2021-22897.patch @@ -0,0 +1,64 @@ +From bbb71507b7bab52002f9b1e0880bed6a32834511 Mon Sep 17 00:00:00 2001 +From: Daniel Stenberg +Date: Fri, 23 Apr 2021 10:54:10 +0200 +Subject: [PATCH] schannel: don't use static to store selected ciphers + +CVE-2021-22897 + +Bug: https://curl.se/docs/CVE-2021-22897.html +--- + lib/vtls/schannel.c | 9 +++++---- + lib/vtls/schannel.h | 3 +++ + 2 files changed, 8 insertions(+), 4 deletions(-) + +diff --git a/lib/vtls/schannel.c b/lib/vtls/schannel.c +index 8c25ac5dd5a5..dba7072273a9 100644 +--- a/lib/vtls/schannel.c ++++ b/lib/vtls/schannel.c +@@ -328,12 +328,12 @@ get_alg_id_by_name(char *name) + } + + static CURLcode +-set_ssl_ciphers(SCHANNEL_CRED *schannel_cred, char *ciphers) ++set_ssl_ciphers(SCHANNEL_CRED *schannel_cred, char *ciphers, ++ int *algIds) + { + char *startCur = ciphers; + int algCount = 0; +- static ALG_ID algIds[45]; /*There are 45 listed in the MS headers*/ +- while(startCur && (0 != *startCur) && (algCount < 45)) { ++ while(startCur && (0 != *startCur) && (algCount < NUMOF_CIPHERS)) { + long alg = strtol(startCur, 0, 0); + if(!alg) + alg = get_alg_id_by_name(startCur); +@@ -593,7 +593,8 @@ schannel_connect_step1(struct Curl_easy *data, struct connectdata *conn, + } + + if(SSL_CONN_CONFIG(cipher_list)) { +- result = set_ssl_ciphers(&schannel_cred, SSL_CONN_CONFIG(cipher_list)); ++ result = set_ssl_ciphers(&schannel_cred, SSL_CONN_CONFIG(cipher_list), ++ BACKEND->algIds); + if(CURLE_OK != result) { + failf(data, "Unable to set ciphers to passed via SSL_CONN_CONFIG"); + return result; +diff --git a/lib/vtls/schannel.h b/lib/vtls/schannel.h +index 2952caa1a5a1..77853aa30f96 100644 +--- a/lib/vtls/schannel.h ++++ b/lib/vtls/schannel.h +@@ -71,6 +71,8 @@ CURLcode Curl_verify_certificate(struct Curl_easy *data, + #endif + #endif + ++#define NUMOF_CIPHERS 45 /* There are 45 listed in the MS headers */ ++ + struct Curl_schannel_cred { + CredHandle cred_handle; + TimeStamp time_stamp; +@@ -102,6 +104,7 @@ struct ssl_backend_data { + #ifdef HAS_MANUAL_VERIFY_API + bool use_manual_cred_validation; /* true if manual cred validation is used */ + #endif ++ ALG_ID algIds[NUMOF_CIPHERS]; + }; + #endif /* EXPOSE_SCHANNEL_INTERNAL_STRUCTS */ + diff --git a/third_party/nixpkgs/pkgs/tools/networking/curl/CVE-2021-22898.patch b/third_party/nixpkgs/pkgs/tools/networking/curl/CVE-2021-22898.patch new file mode 100644 index 0000000000..ea4d2cb37e --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/networking/curl/CVE-2021-22898.patch @@ -0,0 +1,25 @@ +From 39ce47f219b09c380b81f89fe54ac586c8db6bde Mon Sep 17 00:00:00 2001 +From: Harry Sintonen +Date: Fri, 7 May 2021 13:09:57 +0200 +Subject: [PATCH] telnet: check sscanf() for correct number of matches + +CVE-2021-22898 + +Bug: https://curl.se/docs/CVE-2021-22898.html +--- + lib/telnet.c | 2 +- + 1 file changed, 1 insertion(+), 1 deletion(-) + +diff --git a/lib/telnet.c b/lib/telnet.c +index 26e0658ba9cc..fdd137fb0c04 100644 +--- a/lib/telnet.c ++++ b/lib/telnet.c +@@ -922,7 +922,7 @@ static void suboption(struct Curl_easy *data) + size_t tmplen = (strlen(v->data) + 1); + /* Add the variable only if it fits */ + if(len + tmplen < (int)sizeof(temp)-6) { +- if(sscanf(v->data, "%127[^,],%127s", varname, varval)) { ++ if(sscanf(v->data, "%127[^,],%127s", varname, varval) == 2) { + msnprintf((char *)&temp[len], sizeof(temp) - len, + "%c%s%c%s", CURL_NEW_ENV_VAR, varname, + CURL_NEW_ENV_VALUE, varval); diff --git a/third_party/nixpkgs/pkgs/tools/networking/curl/CVE-2021-22901.patch b/third_party/nixpkgs/pkgs/tools/networking/curl/CVE-2021-22901.patch new file mode 100644 index 0000000000..6bd70aa41b --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/networking/curl/CVE-2021-22901.patch @@ -0,0 +1,437 @@ +Based on upstream 7f4a9a9b2a49547eae24d2e19bc5c346e9026479, modified by ris to +apply without 0c55fbab45bedb761766109d41c3da49c4bc66c6 + +diff --git a/lib/multi.c b/lib/multi.c +index 54365f399e9b..1b3e261c682a 100644 +--- a/lib/multi.c ++++ b/lib/multi.c +@@ -878,8 +878,10 @@ bool Curl_multiplex_wanted(const struct Curl_multi *multi) + void Curl_detach_connnection(struct Curl_easy *data) + { + struct connectdata *conn = data->conn; +- if(conn) ++ if(conn) { + Curl_llist_remove(&conn->easyq, &data->conn_queue, NULL); ++ Curl_ssl_detach_conn(data, conn); ++ } + data->conn = NULL; + } + +@@ -896,6 +898,7 @@ void Curl_attach_connnection(struct Curl_easy *data, + data->conn = conn; + Curl_llist_insert_next(&conn->easyq, conn->easyq.tail, data, + &data->conn_queue); ++ Curl_ssl_associate_conn(data, conn); + } + + static int waitconnect_getsock(struct connectdata *conn, +diff --git a/lib/vtls/gskit.c b/lib/vtls/gskit.c +index c648f624579b..ca953769d1ba 100644 +--- a/lib/vtls/gskit.c ++++ b/lib/vtls/gskit.c +@@ -1304,7 +1304,9 @@ const struct Curl_ssl Curl_ssl_gskit = { + Curl_none_set_engine_default, /* set_engine_default */ + Curl_none_engines_list, /* engines_list */ + Curl_none_false_start, /* false_start */ +- NULL /* sha256sum */ ++ NULL, /* sha256sum */ ++ NULL, /* associate_connection */ ++ NULL /* disassociate_connection */ + }; + + #endif /* USE_GSKIT */ +diff --git a/lib/vtls/gtls.c b/lib/vtls/gtls.c +index a10c0dbcca05..ecde5c44deeb 100644 +--- a/lib/vtls/gtls.c ++++ b/lib/vtls/gtls.c +@@ -1656,7 +1656,9 @@ const struct Curl_ssl Curl_ssl_gnutls = { + Curl_none_set_engine_default, /* set_engine_default */ + Curl_none_engines_list, /* engines_list */ + Curl_none_false_start, /* false_start */ +- gtls_sha256sum /* sha256sum */ ++ gtls_sha256sum, /* sha256sum */ ++ NULL, /* associate_connection */ ++ NULL /* disassociate_connection */ + }; + + #endif /* USE_GNUTLS */ +diff --git a/lib/vtls/mbedtls.c b/lib/vtls/mbedtls.c +index ca77de58667c..3a0be0f04b4f 100644 +--- a/lib/vtls/mbedtls.c ++++ b/lib/vtls/mbedtls.c +@@ -1093,7 +1093,9 @@ const struct Curl_ssl Curl_ssl_mbedtls = { + Curl_none_set_engine_default, /* set_engine_default */ + Curl_none_engines_list, /* engines_list */ + Curl_none_false_start, /* false_start */ +- mbedtls_sha256sum /* sha256sum */ ++ mbedtls_sha256sum, /* sha256sum */ ++ NULL, /* associate_connection */ ++ NULL /* disassociate_connection */ + }; + + #endif /* USE_MBEDTLS */ +diff --git a/lib/vtls/mesalink.c b/lib/vtls/mesalink.c +index f16c77c27fe0..bf8600d3230b 100644 +--- a/lib/vtls/mesalink.c ++++ b/lib/vtls/mesalink.c +@@ -666,7 +666,9 @@ const struct Curl_ssl Curl_ssl_mesalink = { + Curl_none_set_engine_default, /* set_engine_default */ + Curl_none_engines_list, /* engines_list */ + Curl_none_false_start, /* false_start */ +- NULL /* sha256sum */ ++ NULL, /* sha256sum */ ++ NULL, /* associate_connection */ ++ NULL /* disassociate_connection */ + }; + + #endif +diff --git a/lib/vtls/nss.c b/lib/vtls/nss.c +index 2aa4bdaa134f..1582b1e580a9 100644 +--- a/lib/vtls/nss.c ++++ b/lib/vtls/nss.c +@@ -2465,7 +2465,9 @@ const struct Curl_ssl Curl_ssl_nss = { + Curl_none_set_engine_default, /* set_engine_default */ + Curl_none_engines_list, /* engines_list */ + nss_false_start, /* false_start */ +- nss_sha256sum /* sha256sum */ ++ nss_sha256sum, /* sha256sum */ ++ NULL, /* associate_connection */ ++ NULL /* disassociate_connection */ + }; + + #endif /* USE_NSS */ +diff --git a/lib/vtls/openssl.c b/lib/vtls/openssl.c +index 1521600dd5f6..ebd7abc3b4ac 100644 +--- a/lib/vtls/openssl.c ++++ b/lib/vtls/openssl.c +@@ -240,6 +240,10 @@ struct ssl_backend_data { + #endif + }; + ++static void ossl_associate_connection(struct Curl_easy *data, ++ struct connectdata *conn, ++ int sockindex); ++ + /* + * Number of bytes to read from the random number seed file. This must be + * a finite value (because some entropy "files" like /dev/urandom have +@@ -2581,6 +2585,7 @@ static CURLcode ossl_connect_step1(struct Curl_easy *data, + curl_socket_t sockfd = conn->sock[sockindex]; + struct ssl_connect_data *connssl = &conn->ssl[sockindex]; + ctx_option_t ctx_options = 0; ++ void *ssl_sessionid = NULL; + + #ifdef SSL_CTRL_SET_TLSEXT_HOSTNAME + bool sni; +@@ -3225,46 +3230,23 @@ static CURLcode ossl_connect_step1(struct Curl_easy *data, + } + #endif + +- /* Check if there's a cached ID we can/should use here! */ +- if(SSL_SET_OPTION(primary.sessionid)) { +- void *ssl_sessionid = NULL; +- int data_idx = ossl_get_ssl_data_index(); +- int connectdata_idx = ossl_get_ssl_conn_index(); +- int sockindex_idx = ossl_get_ssl_sockindex_index(); +- int proxy_idx = ossl_get_proxy_index(); +- +- if(data_idx >= 0 && connectdata_idx >= 0 && sockindex_idx >= 0 && +- proxy_idx >= 0) { +- /* Store the data needed for the "new session" callback. +- * The sockindex is stored as a pointer to an array element. */ +- SSL_set_ex_data(backend->handle, data_idx, data); +- SSL_set_ex_data(backend->handle, connectdata_idx, conn); +- SSL_set_ex_data(backend->handle, sockindex_idx, conn->sock + sockindex); +-#ifndef CURL_DISABLE_PROXY +- SSL_set_ex_data(backend->handle, proxy_idx, SSL_IS_PROXY() ? (void *) 1: +- NULL); +-#else +- SSL_set_ex_data(backend->handle, proxy_idx, NULL); +-#endif +- +- } ++ ossl_associate_connection(data, conn, sockindex); + +- Curl_ssl_sessionid_lock(data); +- if(!Curl_ssl_getsessionid(data, conn, SSL_IS_PROXY() ? TRUE : FALSE, +- &ssl_sessionid, NULL, sockindex)) { +- /* we got a session id, use it! */ +- if(!SSL_set_session(backend->handle, ssl_sessionid)) { +- Curl_ssl_sessionid_unlock(data); +- failf(data, "SSL: SSL_set_session failed: %s", +- ossl_strerror(ERR_get_error(), error_buffer, +- sizeof(error_buffer))); +- return CURLE_SSL_CONNECT_ERROR; +- } +- /* Informational message */ +- infof(data, "SSL re-using session ID\n"); ++ Curl_ssl_sessionid_lock(data); ++ if(!Curl_ssl_getsessionid(data, conn, SSL_IS_PROXY() ? TRUE : FALSE, ++ &ssl_sessionid, NULL, sockindex)) { ++ /* we got a session id, use it! */ ++ if(!SSL_set_session(backend->handle, ssl_sessionid)) { ++ Curl_ssl_sessionid_unlock(data); ++ failf(data, "SSL: SSL_set_session failed: %s", ++ ossl_strerror(ERR_get_error(), error_buffer, ++ sizeof(error_buffer))); ++ return CURLE_SSL_CONNECT_ERROR; + } +- Curl_ssl_sessionid_unlock(data); ++ /* Informational message */ ++ infof(data, "SSL re-using session ID\n"); + } ++ Curl_ssl_sessionid_unlock(data); + + #ifndef CURL_DISABLE_PROXY + if(conn->proxy_ssl[sockindex].use) { +@@ -4498,6 +4480,90 @@ static void *ossl_get_internals(struct ssl_connect_data *connssl, + (void *)backend->ctx : (void *)backend->handle; + } + ++static void ossl_associate_connection(struct Curl_easy *data, ++ struct connectdata *conn, ++ int sockindex) ++{ ++ struct ssl_connect_data *connssl = &conn->ssl[sockindex]; ++ struct ssl_backend_data *backend = connssl->backend; ++ ++ /* If we don't have SSL context, do nothing. */ ++ if(!backend->handle) ++ return; ++ ++ if(SSL_SET_OPTION(primary.sessionid)) { ++ int data_idx = ossl_get_ssl_data_index(); ++ int connectdata_idx = ossl_get_ssl_conn_index(); ++ int sockindex_idx = ossl_get_ssl_sockindex_index(); ++ int proxy_idx = ossl_get_proxy_index(); ++ ++ if(data_idx >= 0 && connectdata_idx >= 0 && sockindex_idx >= 0 && ++ proxy_idx >= 0) { ++ /* Store the data needed for the "new session" callback. ++ * The sockindex is stored as a pointer to an array element. */ ++ SSL_set_ex_data(backend->handle, data_idx, data); ++ SSL_set_ex_data(backend->handle, connectdata_idx, conn); ++ SSL_set_ex_data(backend->handle, sockindex_idx, conn->sock + sockindex); ++#ifndef CURL_DISABLE_PROXY ++ SSL_set_ex_data(backend->handle, proxy_idx, SSL_IS_PROXY() ? (void *) 1: ++ NULL); ++#else ++ SSL_set_ex_data(backend->handle, proxy_idx, NULL); ++#endif ++ } ++ } ++} ++ ++/* ++ * Starting with TLS 1.3, the ossl_new_session_cb callback gets called after ++ * the handshake. If the transfer that sets up the callback gets killed before ++ * this callback arrives, we must make sure to properly clear the data to ++ * avoid UAF problems. A future optimization could be to instead store another ++ * transfer that might still be using the same connection. ++ */ ++ ++static void ossl_disassociate_connection(struct Curl_easy *data, ++ int sockindex) ++{ ++ struct connectdata *conn = data->conn; ++ struct ssl_connect_data *connssl = &conn->ssl[sockindex]; ++ struct ssl_backend_data *backend = connssl->backend; ++ ++ /* If we don't have SSL context, do nothing. */ ++ if(!backend->handle) ++ return; ++ ++ if(SSL_SET_OPTION(primary.sessionid)) { ++ bool isproxy = FALSE; ++ bool incache; ++ void *old_ssl_sessionid = NULL; ++ int data_idx = ossl_get_ssl_data_index(); ++ int connectdata_idx = ossl_get_ssl_conn_index(); ++ int sockindex_idx = ossl_get_ssl_sockindex_index(); ++ int proxy_idx = ossl_get_proxy_index(); ++ ++ if(data_idx >= 0 && connectdata_idx >= 0 && sockindex_idx >= 0 && ++ proxy_idx >= 0) { ++ /* Invalidate the session cache entry, if any */ ++ isproxy = SSL_get_ex_data(backend->handle, proxy_idx) ? TRUE : FALSE; ++ ++ /* Disable references to data in "new session" callback to avoid ++ * accessing a stale pointer. */ ++ SSL_set_ex_data(backend->handle, data_idx, NULL); ++ SSL_set_ex_data(backend->handle, connectdata_idx, NULL); ++ SSL_set_ex_data(backend->handle, sockindex_idx, NULL); ++ SSL_set_ex_data(backend->handle, proxy_idx, NULL); ++ } ++ ++ Curl_ssl_sessionid_lock(data); ++ incache = !(Curl_ssl_getsessionid(data, conn, isproxy, ++ &old_ssl_sessionid, NULL, sockindex)); ++ if(incache) ++ Curl_ssl_delsessionid(data, old_ssl_sessionid); ++ Curl_ssl_sessionid_unlock(data); ++ } ++} ++ + const struct Curl_ssl Curl_ssl_openssl = { + { CURLSSLBACKEND_OPENSSL, "openssl" }, /* info */ + +@@ -4533,10 +4599,12 @@ const struct Curl_ssl Curl_ssl_openssl = { + ossl_engines_list, /* engines_list */ + Curl_none_false_start, /* false_start */ + #if (OPENSSL_VERSION_NUMBER >= 0x0090800fL) && !defined(OPENSSL_NO_SHA256) +- ossl_sha256sum /* sha256sum */ ++ ossl_sha256sum, /* sha256sum */ + #else +- NULL /* sha256sum */ ++ NULL, /* sha256sum */ + #endif ++ ossl_associate_connection, /* associate_connection */ ++ ossl_disassociate_connection /* disassociate_connection */ + }; + + #endif /* USE_OPENSSL */ +diff --git a/lib/vtls/rustls.c b/lib/vtls/rustls.c +index 9dfbd2c3c4c2..161f3bf51d75 100644 +--- a/lib/vtls/rustls.c ++++ b/lib/vtls/rustls.c +@@ -604,7 +604,9 @@ const struct Curl_ssl Curl_ssl_rustls = { + Curl_none_set_engine_default, /* set_engine_default */ + Curl_none_engines_list, /* engines_list */ + Curl_none_false_start, /* false_start */ +- NULL /* sha256sum */ ++ NULL, /* sha256sum */ ++ NULL, /* associate_connection */ ++ NULL /* disassociate_connection */ + }; + + #endif /* USE_RUSTLS */ +diff --git a/lib/vtls/schannel.c b/lib/vtls/schannel.c +index dba7072273a9..2bcf11db2576 100644 +--- a/lib/vtls/schannel.c ++++ b/lib/vtls/schannel.c +@@ -329,7 +329,7 @@ get_alg_id_by_name(char *name) + + static CURLcode + set_ssl_ciphers(SCHANNEL_CRED *schannel_cred, char *ciphers, +- int *algIds) ++ ALG_ID *algIds) + { + char *startCur = ciphers; + int algCount = 0; +@@ -2433,7 +2433,9 @@ const struct Curl_ssl Curl_ssl_schannel = { + Curl_none_set_engine_default, /* set_engine_default */ + Curl_none_engines_list, /* engines_list */ + Curl_none_false_start, /* false_start */ +- schannel_sha256sum /* sha256sum */ ++ schannel_sha256sum, /* sha256sum */ ++ NULL, /* associate_connection */ ++ NULL /* disassociate_connection */ + }; + + #endif /* USE_SCHANNEL */ +diff --git a/lib/vtls/sectransp.c b/lib/vtls/sectransp.c +index 4276b89cfb3a..8b1e84ed7715 100644 +--- a/lib/vtls/sectransp.c ++++ b/lib/vtls/sectransp.c +@@ -3453,6 +3453,8 @@ const struct Curl_ssl Curl_ssl_sectransp = { + Curl_none_engines_list, /* engines_list */ + sectransp_false_start, /* false_start */ + sectransp_sha256sum /* sha256sum */ ++ NULL, /* associate_connection */ ++ NULL /* disassociate_connection */ + }; + + #ifdef __clang__ +diff --git a/lib/vtls/vtls.c b/lib/vtls/vtls.c +index d63fd5c76386..65f4f773dd63 100644 +--- a/lib/vtls/vtls.c ++++ b/lib/vtls/vtls.c +@@ -586,6 +586,25 @@ CURLcode Curl_ssl_addsessionid(struct Curl_easy *data, + return CURLE_OK; + } + ++void Curl_ssl_associate_conn(struct Curl_easy *data, ++ struct connectdata *conn) ++{ ++ if(Curl_ssl->associate_connection) { ++ Curl_ssl->associate_connection(data, conn, FIRSTSOCKET); ++ if(conn->sock[SECONDARYSOCKET] && conn->bits.sock_accepted) ++ Curl_ssl->associate_connection(data, conn, SECONDARYSOCKET); ++ } ++} ++ ++void Curl_ssl_detach_conn(struct Curl_easy *data, ++ struct connectdata *conn) ++{ ++ if(Curl_ssl->disassociate_connection) { ++ Curl_ssl->disassociate_connection(data, FIRSTSOCKET); ++ if(conn->sock[SECONDARYSOCKET] && conn->bits.sock_accepted) ++ Curl_ssl->disassociate_connection(data, SECONDARYSOCKET); ++ } ++} + + void Curl_ssl_close_all(struct Curl_easy *data) + { +@@ -1214,7 +1233,9 @@ static const struct Curl_ssl Curl_ssl_multi = { + Curl_none_set_engine_default, /* set_engine_default */ + Curl_none_engines_list, /* engines_list */ + Curl_none_false_start, /* false_start */ +- NULL /* sha256sum */ ++ NULL, /* sha256sum */ ++ NULL, /* associate_connection */ ++ NULL /* disassociate_connection */ + }; + + const struct Curl_ssl *Curl_ssl = +diff --git a/lib/vtls/vtls.h b/lib/vtls/vtls.h +index a22d526ca810..7f93e7aedb21 100644 +--- a/lib/vtls/vtls.h ++++ b/lib/vtls/vtls.h +@@ -84,6 +84,11 @@ struct Curl_ssl { + bool (*false_start)(void); + CURLcode (*sha256sum)(const unsigned char *input, size_t inputlen, + unsigned char *sha256sum, size_t sha256sumlen); ++ ++ void (*associate_connection)(struct Curl_easy *data, ++ struct connectdata *conn, ++ int sockindex); ++ void (*disassociate_connection)(struct Curl_easy *data, int sockindex); + }; + + #ifdef USE_SSL +@@ -283,6 +288,11 @@ bool Curl_ssl_cert_status_request(void); + + bool Curl_ssl_false_start(void); + ++void Curl_ssl_associate_conn(struct Curl_easy *data, ++ struct connectdata *conn); ++void Curl_ssl_detach_conn(struct Curl_easy *data, ++ struct connectdata *conn); ++ + #define SSL_SHUTDOWN_TIMEOUT 10000 /* ms */ + + #else /* if not USE_SSL */ +@@ -309,6 +319,8 @@ bool Curl_ssl_false_start(void); + #define Curl_ssl_cert_status_request() FALSE + #define Curl_ssl_false_start() FALSE + #define Curl_ssl_tls13_ciphersuites() FALSE ++#define Curl_ssl_associate_conn(a,b) Curl_nop_stmt ++#define Curl_ssl_detach_conn(a,b) Curl_nop_stmt + #endif + + #endif /* HEADER_CURL_VTLS_H */ +diff --git a/lib/vtls/wolfssl.c b/lib/vtls/wolfssl.c +index 02fcd236697e..60e27e366252 100644 +--- a/lib/vtls/wolfssl.c ++++ b/lib/vtls/wolfssl.c +@@ -1125,7 +1125,9 @@ const struct Curl_ssl Curl_ssl_wolfssl = { + Curl_none_set_engine_default, /* set_engine_default */ + Curl_none_engines_list, /* engines_list */ + Curl_none_false_start, /* false_start */ +- wolfssl_sha256sum /* sha256sum */ ++ wolfssl_sha256sum, /* sha256sum */ ++ NULL, /* associate_connection */ ++ NULL /* disassociate_connection */ + }; + + #endif diff --git a/third_party/nixpkgs/pkgs/tools/networking/curl/default.nix b/third_party/nixpkgs/pkgs/tools/networking/curl/default.nix index 05b91bfba0..984a6ecaae 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/curl/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/curl/default.nix @@ -52,6 +52,12 @@ stdenv.mkDerivation rec { sha256 = "1scmfrp0c27pkd7yva9k50miprjpsyfbb33apx72qc9igm6ii3ks"; }; + patches = [ + ./CVE-2021-22897.patch + ./CVE-2021-22898.patch + ./CVE-2021-22901.patch + ]; + outputs = [ "bin" "dev" "out" "man" "devdoc" ]; separateDebugInfo = stdenv.isLinux; diff --git a/third_party/nixpkgs/pkgs/tools/networking/dd-agent/5.nix b/third_party/nixpkgs/pkgs/tools/networking/dd-agent/5.nix index f40ef295d1..744fd482ab 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/dd-agent/5.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/dd-agent/5.nix @@ -17,7 +17,7 @@ let propagatedBuildInputs = with self; [ six requests - websocket_client + websocket-client ipaddress docker_pycreds uptime diff --git a/third_party/nixpkgs/pkgs/tools/networking/dd-agent/integrations-core.nix b/third_party/nixpkgs/pkgs/tools/networking/dd-agent/integrations-core.nix index edf7a8faaf..e466be816e 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/dd-agent/integrations-core.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/dd-agent/integrations-core.nix @@ -75,7 +75,7 @@ let mongo = (ps: [ ps.pymongo ]); network = (ps: [ ps.psutil ]); nginx = (ps: []); - postgres = (ps: with ps; [ pg8000_1_12 psycopg2 ]); + postgres = (ps: with ps; [ pg8000 psycopg2 ]); }; # All integrations (default + extra): diff --git a/third_party/nixpkgs/pkgs/tools/networking/dhcp/default.nix b/third_party/nixpkgs/pkgs/tools/networking/dhcp/default.nix index 08b3543c5c..5d71f9641f 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/dhcp/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/dhcp/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { pname = "dhcp"; - version = "4.4.2"; + version = "4.4.2-P1"; src = fetchurl { url = "https://ftp.isc.org/isc/dhcp/${version}/${pname}-${version}.tar.gz"; - sha256 = "08a5003zdxgl41b29zjkxa92h2i40zyjgxg0npvnhpkfl5jcsz0s"; + sha256 = "06jsr0cg5rsmyibshrpcb9za0qgwvqccashdma7mlm1rflrh8pmh"; }; patches = diff --git a/third_party/nixpkgs/pkgs/tools/networking/dnsproxy/default.nix b/third_party/nixpkgs/pkgs/tools/networking/dnsproxy/default.nix index 79e9e6e641..093863f21c 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/dnsproxy/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/dnsproxy/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "dnsproxy"; - version = "0.37.5"; + version = "0.38.0"; src = fetchFromGitHub { owner = "AdguardTeam"; repo = pname; rev = "v${version}"; - sha256 = "sha256-j+8PA5kYHaRWbugcBjUIeos6488rw8lCOjCyz7IAcQg="; + sha256 = "sha256-dltCZ6g5Ta/M2N95TRkdLRr3T0YeKdkY88zE306AtDg="; }; vendorSha256 = null; diff --git a/third_party/nixpkgs/pkgs/tools/networking/fastd/default.nix b/third_party/nixpkgs/pkgs/tools/networking/fastd/default.nix index 493112b93a..8d1594b818 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/fastd/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/fastd/default.nix @@ -5,6 +5,7 @@ , meson , ninja , pkg-config +, libmnl , libuecc , libsodium , libcap @@ -14,13 +15,13 @@ stdenv.mkDerivation rec { pname = "fastd"; - version = "21"; + version = "22"; src = fetchFromGitHub { owner = "Neoraider"; repo = "fastd"; rev = "v${version}"; - sha256 = "1p4k50dk8byrghbr0fwmgwps8df6rlkgcd603r14i71m5g27z5gw"; + sha256 = "0qni32j7d3za9f87m68wq8zgalvfxdrx1zxi6l4x7vvmpcw5nhpq"; }; nativeBuildInputs = [ @@ -36,6 +37,8 @@ stdenv.mkDerivation rec { libsodium libuecc openssl + ] ++ lib.optionals (stdenv.isLinux) [ + libmnl ]; # some options are only available on x86 diff --git a/third_party/nixpkgs/pkgs/tools/networking/getmail6/default.nix b/third_party/nixpkgs/pkgs/tools/networking/getmail6/default.nix index 673ff7f83a..ceec2bab49 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/getmail6/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/getmail6/default.nix @@ -1,16 +1,20 @@ -{ fetchFromGitHub, python3Packages, lib }: +{ lib +, python3 +, fetchFromGitHub +}: -python3Packages.buildPythonApplication rec { +python3.pkgs.buildPythonApplication rec { pname = "getmail6"; - version = "6.16"; + version = "6.17"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "1y373nzbffjjjs43441cn3wrb0yq1mw2vqixhizbzdacrs45xbfa"; + sha256 = "sha256-pPf+98zoS1t59RoqbmS4V0OsTLMR37Wcsl9BSWuvc0k="; }; + # needs a Docker setup doCheck = false; pythonImportsCheck = [ "getmailcore" ]; @@ -26,6 +30,6 @@ python3Packages.buildPythonApplication rec { homepage = "https://getmail6.org"; updateWalker = true; license = licenses.gpl2Plus; - maintainers = with maintainers; [ abbe ]; + maintainers = with maintainers; [ abbe dotlambda ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/networking/globalprotect-openconnect/default.nix b/third_party/nixpkgs/pkgs/tools/networking/globalprotect-openconnect/default.nix new file mode 100644 index 0000000000..d61668f7b6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/networking/globalprotect-openconnect/default.nix @@ -0,0 +1,43 @@ +{ stdenv, lib, fetchFromGitHub +, qmake, qtwebsockets, qtwebengine, wrapQtAppsHook, openconnect +}: + +stdenv.mkDerivation rec { + pname = "globalprotect-openconnect"; + version = "1.2.6"; + + src = fetchFromGitHub { + owner = "yuezk"; + repo = "GlobalProtect-openconnect"; + rev = "c14a6ad1d2b62f8d297bc4cfbcb1dcea4d99112f"; + fetchSubmodules = true; + sha256 = "1zkc3vk1j31n2zs5ammzv23dah7x163gfrzz222ynbkvsccrhzrk"; + }; + + nativeBuildInputs = [ qmake wrapQtAppsHook ]; + + buildInputs = [ openconnect qtwebsockets qtwebengine ]; + + patchPhase = '' + for f in GPClient/GPClient.pro \ + GPClient/com.yuezk.qt.gpclient.desktop \ + GPService/GPService.pro \ + GPService/dbus/com.yuezk.qt.GPService.service \ + GPService/systemd/gpservice.service; do + substituteInPlace $f \ + --replace /usr $out \ + --replace /etc $out/lib; + done; + + substituteInPlace GPService/gpservice.h \ + --replace /usr/local/bin/openconnect ${openconnect}/bin/openconnect; + ''; + + meta = with lib; { + description = "GlobalProtect VPN client (GUI) for Linux based on OpenConnect that supports SAML auth mode"; + homepage = "https://github.com/yuezk/GlobalProtect-openconnect"; + license = licenses.gpl3Only; + maintainers = [ maintainers.jerith666 ]; + platforms = platforms.linux; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/networking/gobgp/default.nix b/third_party/nixpkgs/pkgs/tools/networking/gobgp/default.nix index 942df983fc..96f806aad3 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/gobgp/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/gobgp/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "gobgp"; - version = "2.27.0"; + version = "2.28.0"; src = fetchFromGitHub { owner = "osrg"; repo = "gobgp"; rev = "v${version}"; - sha256 = "sha256-Ofg+z8wUttqM1THatPFi0cuyLSEryhTmg3JC1o+16eA="; + sha256 = "sha256-AlAfs1wi3hS7cqAtGqfUgv5CIonu7TmXWgxL1zSBh54="; }; vendorSha256 = "sha256-PWm7XnO6LPaU8g8ymmqRkQv2KSX9kLv9RVaa000mrTY="; diff --git a/third_party/nixpkgs/pkgs/tools/networking/ipinfo/default.nix b/third_party/nixpkgs/pkgs/tools/networking/ipinfo/default.nix index 32f897bbe8..91bc654c83 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/ipinfo/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/ipinfo/default.nix @@ -5,17 +5,20 @@ buildGoModule rec { pname = "ipinfo"; - version = "1.1.5"; + version = "2.0.1"; src = fetchFromGitHub { owner = pname; repo = "cli"; rev = "${pname}-${version}"; - sha256 = "16i5vmx39j7l5mhs28niapki9530nsbw6xik8rsky55v9i5pr72d"; + sha256 = "00rqqkybvzxcpa6fy799fxmn95xqx7s3z3mqfryzi35dlmjdfzqy"; }; vendorSha256 = null; + # Tests require network access + doCheck = false; + meta = with lib; { description = "Command Line Interface for the IPinfo API"; homepage = "https://github.com/ipinfo/cli"; diff --git a/third_party/nixpkgs/pkgs/tools/networking/isync/default.nix b/third_party/nixpkgs/pkgs/tools/networking/isync/default.nix index f6263f187b..666e19ca81 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/isync/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/isync/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { pname = "isync"; - version = "1.4.1"; + version = "1.4.2"; src = fetchurl { url = "mirror://sourceforge/isync/${pname}-${version}.tar.gz"; - sha256 = "0l01880fcyqn6xq9n8236ha5n2a3wl5g8rmv22z8nv5hgfsxndhd"; + sha256 = "0hskfpj4r4q3959k3npyqli353daj3r5d9mfia9bbmig87nyfd8r"; }; nativeBuildInputs = [ pkg-config perl ]; diff --git a/third_party/nixpkgs/pkgs/tools/networking/netifd/default.nix b/third_party/nixpkgs/pkgs/tools/networking/netifd/default.nix index efa05591f5..dc343e563a 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/netifd/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/netifd/default.nix @@ -1,27 +1,22 @@ -{ runCommand, lib, stdenv, cmake, fetchgit, libnl, libubox, uci, ubus, json_c }: +{ lib, stdenv, cmake, fetchgit, libnl, libubox, uci, ubus, json_c, pkg-config }: stdenv.mkDerivation { pname = "netifd"; - version = "unstable-2020-07-11"; + version = "unstable-2021-04-03"; src = fetchgit { url = "https://git.openwrt.org/project/netifd.git"; - rev = "3d9bd73e8c2d8a1f78effbe92dd2495bbd2552c4"; - sha256 = "085sx1gsigbi1jr19l387rc5p6ja1np6q2gb84khjd4pyiqwk840"; + rev = "327da9895327bc56b23413ee91a6e6b6e0e4329d"; + sha256 = "0jvk2hx8kbkc6d72gh9rwap8ds6qgnmny6306vvzxy68v03xikwv"; }; buildInputs = [ libnl libubox uci ubus json_c ]; - nativeBuildInputs = [ cmake ]; - - preBuild = '' - export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE \ - -I$(echo "${lib.getDev libnl}"/include/libnl*/)" - ''; + nativeBuildInputs = [ cmake pkg-config ]; meta = with lib; { description = "OpenWrt Network interface configuration daemon"; homepage = "https://git.openwrt.org/?p=project/netifd.git;a=summary"; - license = licenses.lgpl21; + license = licenses.lgpl21Only; platforms = platforms.linux; maintainers = with maintainers; [ petabyteboy ]; }; diff --git a/third_party/nixpkgs/pkgs/tools/networking/networkmanager/default.nix b/third_party/nixpkgs/pkgs/tools/networking/networkmanager/default.nix index 11c5462ab2..4f3b7a3204 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/networkmanager/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/networkmanager/default.nix @@ -97,8 +97,9 @@ in stdenv.mkDerivation rec { passthru = { updateScript = gnome.updateScript { - packageName = pname; + packageName = "NetworkManager"; attrPath = "networkmanager"; + versionPolicy = "odd-unstable"; }; }; diff --git a/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/default.nix b/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/default.nix index 3549677e22..fbfab8d2f0 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/default.nix @@ -39,7 +39,7 @@ stdenv.mkDerivation { description = "Allows you to expose a web server running on your local machine to the internet"; homepage = "https://ngrok.com/"; license = licenses.unfree; - platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" "x86_64-darwin" ]; + platforms = [ "i686-linux" "x86_64-linux" "aarch64-linux" "x86_64-darwin" "aarch64-darwin" ]; maintainers = [ maintainers.bobvanderlinden ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/update.sh b/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/update.sh index 7908a1524e..4e2aaf4e55 100755 --- a/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/update.sh +++ b/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/update.sh @@ -29,5 +29,6 @@ get_download_info() { get_download_info linux arm get_download_info linux arm64 get_download_info darwin amd64 + get_download_info darwin arm64 ) | jq --slurp 'map ({ (.sys): . }) | add' \ > pkgs/tools/networking/ngrok-2/versions.json diff --git a/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/versions.json b/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/versions.json index 656e6a640e..85b0e47168 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/versions.json +++ b/third_party/nixpkgs/pkgs/tools/networking/ngrok-2/versions.json @@ -1,32 +1,38 @@ { "linux-386": { "sys": "linux-386", - "url": "https://bin.equinox.io/a/bjFaKy3TSAg/ngrok-2.3.35-linux-386", - "sha256": "1fdd1c057c3c31044400ef6ade20ad3f10bce415ad33ccfb4bc2fd83bb36f62f", - "version": "2.3.35" + "url": "https://bin.equinox.io/a/c4ZY6f7svn7/ngrok-2.3.40-linux-386", + "sha256": "1b645ff0abbb28ca7c0f6a2109653be2dc281860b582b4de6927fde12c99da26", + "version": "2.3.40" }, "linux-amd64": { "sys": "linux-amd64", - "url": "https://bin.equinox.io/a/52fZaxjGg9n/ngrok-2.3.35-linux-amd64", - "sha256": "b456608239cdf4b5119916c62a87640667d1cb1900c53faed89e3dacc1fe4679", - "version": "2.3.35" + "url": "https://bin.equinox.io/a/b5PAmc6L9z2/ngrok-2.3.40-linux-amd64", + "sha256": "218d267cd1195334718bafac14bfdf1c19dc95dcf8a24aaa6a1383c21dc86e76", + "version": "2.3.40" }, "linux-arm": { "sys": "linux-arm", - "url": "https://bin.equinox.io/a/2cUd5mRRjoF/ngrok-2.3.35-linux-arm", - "sha256": "94d88311e9b2baea615d9fe7c6921ac0167040ec66aa0d0cbb856c027d617f1f", - "version": "2.3.35" + "url": "https://bin.equinox.io/a/aRh9rdUAJyf/ngrok-2.3.40-linux-arm", + "sha256": "538a7431df141a929a250eaf6ed7afdcce817bcd8cfe60b61f4c6d7a289b1d1c", + "version": "2.3.40" }, "linux-arm64": { "sys": "linux-arm64", - "url": "https://bin.equinox.io/a/k2qx6ipHqpb/ngrok-2.3.35-linux-arm64", - "sha256": "fd07f5c449f1c1444606bbc9d06fa6b649325ddf0b3e6dac6f32d785a886f170", - "version": "2.3.35" + "url": "https://bin.equinox.io/a/2gpRjDRBpJv/ngrok-2.3.40-linux-arm64", + "sha256": "dc7b4465ef95f6d04d1b1996111b3a2631e5f464d7dca7f4994f59ea4edbe21f", + "version": "2.3.40" }, "darwin-amd64": { "sys": "darwin-amd64", - "url": "https://bin.equinox.io/a/jKkD2Wcds2L/ngrok-2.3.35-darwin-amd64", - "sha256": "dd74a6be1a155c41ff06aadad910196cae13e06ab997bc0b144288b2da568f2a", - "version": "2.3.35" + "url": "https://bin.equinox.io/a/fcZQXtHSDgM/ngrok-2.3.40-darwin-amd64", + "sha256": "80c8fb121d6c93350d84351d9516674f4e20a3e003cdd7dcb4c3e7c48b9c5b07", + "version": "2.3.40" + }, + "darwin-arm64": { + "sys": "darwin-arm64", + "url": "https://bin.equinox.io/a/3TEKdZeyAnt/ngrok-2.3.40-darwin-arm64", + "sha256": "c9e6dfec454f9faec92a13dfd3f3857de982007e3b85987bb875aa0d74ca8101", + "version": "2.3.40" } } diff --git a/third_party/nixpkgs/pkgs/tools/networking/notemap/default.nix b/third_party/nixpkgs/pkgs/tools/networking/notemap/default.nix new file mode 100644 index 0000000000..040f26752b --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/networking/notemap/default.nix @@ -0,0 +1,37 @@ +{ lib +, stdenv +, fetchzip +, pkg-config +, libressl +}: + +stdenv.mkDerivation rec { + pname = "notemap"; + version = "1.3"; + + src = fetchzip { + url = "https://git.causal.agency/notemap/snapshot/notemap-${version}.tar.gz"; + sha256 = "0s9c1xx0iggyzclqw3294bjv7qgvd5l5zgbryks4hvfibr73r6ps"; + }; + + nativeBuildInputs = [ + pkg-config + ]; + + buildInputs = [ + libressl + ]; + + meta = { + description = "Mirror notes to IMAP"; + longDescription = '' + notemap(1) mirrors text files to an IMAP mailbox in a format compatible with the iOS + Notes app. It's intended to make notes managed in git(1) easily accessible + from the phone. + ''; + license = lib.licenses.gpl3Plus; + maintainers = [ lib.maintainers.sternenseemann ]; + homepage = "https://git.causal.agency/notemap/about/"; + platforms = lib.platforms.unix; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/networking/openconnect/default.nix b/third_party/nixpkgs/pkgs/tools/networking/openconnect/default.nix index 8afe546c45..0e1da29320 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/openconnect/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/openconnect/default.nix @@ -8,8 +8,8 @@ , libxml2 , stoken , zlib -, fetchgit -, darwin +, vpnc-scripts +, PCSC , head ? false , fetchFromGitLab , autoreconfHook @@ -17,13 +17,7 @@ assert (openssl != null) == (gnutls == null); -let vpnc = fetchgit { - url = "git://git.infradead.org/users/dwmw2/vpnc-scripts.git"; - rev = "c0122e891f7e033f35f047dad963702199d5cb9e"; - sha256 = "11b1ls012mb704jphqxjmqrfbbhkdjb64j2q4k8wb5jmja8jnd14"; -}; - -in stdenv.mkDerivation rec { +stdenv.mkDerivation rec { pname = "openconnect${lib.optionalString head "-head"}"; version = if head then "2021-05-05" else "8.10"; @@ -42,19 +36,19 @@ in stdenv.mkDerivation rec { outputs = [ "out" "dev" ]; configureFlags = [ - "--with-vpnc-script=${vpnc}/vpnc-script" + "--with-vpnc-script=${vpnc-scripts}/bin/vpnc-script" "--disable-nls" "--without-openssl-version-check" ]; buildInputs = [ openssl gnutls gmp libxml2 stoken zlib ] - ++ lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.PCSC; + ++ lib.optional stdenv.isDarwin PCSC; nativeBuildInputs = [ pkg-config ] ++ lib.optional head autoreconfHook; meta = with lib; { description = "VPN Client for Cisco's AnyConnect SSL VPN"; - homepage = "http://www.infradead.org/openconnect/"; + homepage = "https://www.infradead.org/openconnect/"; license = licenses.lgpl21Only; maintainers = with maintainers; [ pradeepchhetri tricktron ]; platforms = lib.platforms.linux ++ lib.platforms.darwin; diff --git a/third_party/nixpkgs/pkgs/tools/networking/radsecproxy/default.nix b/third_party/nixpkgs/pkgs/tools/networking/radsecproxy/default.nix index 1a7d895f81..1c56d520b9 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/radsecproxy/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/radsecproxy/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "radsecproxy"; - version = "1.8.2"; + version = "1.9.0"; src = fetchFromGitHub { owner = pname; repo = pname; rev = version; - sha256 = "1g7q128cip1dac9jad58rd96afx4xz7x7vsiv0af8iyq2ivqvs2m"; + sha256 = "0ppgnvmzk5j42zvz74mwaz6767lzf9vpl8y57w612fvqpg65g4bv"; }; nativeBuildInputs = [ autoreconfHook ]; diff --git a/third_party/nixpkgs/pkgs/tools/networking/redfang/default.nix b/third_party/nixpkgs/pkgs/tools/networking/redfang/default.nix new file mode 100644 index 0000000000..9e18d687dc --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/networking/redfang/default.nix @@ -0,0 +1,35 @@ +{ lib, stdenv, fetchFromGitLab, fetchpatch, bluez }: + +stdenv.mkDerivation rec { + pname = "redfang"; + version = "2.5"; + + src = fetchFromGitLab { + group = "kalilinux"; + owner = "packages"; + repo = pname; + rev = "upstream/${version}"; + sha256 = "sha256-dF9QmBckyHAZ+JbLr0jTmp0eMu947unJqjrTMsJAfIE="; + }; + + patches = [ + # make install rule + (fetchpatch { + url = "https://gitlab.com/kalilinux/packages/redfang/-/merge_requests/1.diff"; + sha256 = "sha256-oxIrUAucxsBL4+u9zNNe2XXoAd088AEAHcRB/AN7B1M="; + }) + ]; + + installFlags = [ "DESTDIR=$(out)" ]; + + NIX_CFLAGS_COMPILE = "-Wno-format-security"; + + buildInputs = [ bluez ]; + + meta = with lib; { + description = "A small proof-of-concept application to find non discoverable bluetooth devices"; + homepage = "https://gitlab.com/kalilinux/packages/redfang"; + license = licenses.gpl2Only; + maintainers = with maintainers; [ fortuneteller2k ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/networking/rshijack/default.nix b/third_party/nixpkgs/pkgs/tools/networking/rshijack/default.nix index 76a674dead..39f4004eae 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/rshijack/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/rshijack/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "rshijack"; - version = "0.3.0"; + version = "0.4.0"; src = fetchFromGitHub { owner = "kpcyrd"; repo = pname; rev = "v${version}"; - sha256 = "0y01hi3jpfawqlqs8ka0vwfhjw5j5gkhk2nz5m13ns2h27bw20v7"; + sha256 = "sha256-jpiwbjsYsb5scFbjtv2eTv6oo0HWWTYLpnpTZ8DEqb0="; }; - cargoSha256 = "1rbp94wxr8kqjfg35hf44vn3qa0f0jcq8i50a8d0g5y2qf12h04d"; + cargoSha256 = "sha256-biHDnLu7OiYpnwtmayk2m6QYvX51YUVJH2FGP4qo14Q="; meta = with lib; { description = "TCP connection hijacker"; diff --git a/third_party/nixpkgs/pkgs/tools/networking/s6-dns/default.nix b/third_party/nixpkgs/pkgs/tools/networking/s6-dns/default.nix index 5036b1a87e..a4ebf5beef 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/s6-dns/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/s6-dns/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6-dns"; - version = "2.3.5.0"; - sha256 = "0h5p5dbkkdadahrp4pqhc3x9ds758i6djy49k5zrn7mm5k4722wz"; + version = "2.3.5.1"; + sha256 = "0qsgqwdr5ms337fc9f2b4aa5cr7myvbzndvgkgswnrdwszjm078c"; description = "A suite of DNS client programs and libraries for Unix systems"; diff --git a/third_party/nixpkgs/pkgs/tools/networking/s6-networking/default.nix b/third_party/nixpkgs/pkgs/tools/networking/s6-networking/default.nix index be19656f1c..e0c8eda9c7 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/s6-networking/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/s6-networking/default.nix @@ -19,8 +19,8 @@ assert sslSupportEnabled -> sslLibs ? ${sslSupport}; buildPackage { pname = "s6-networking"; - version = "2.4.1.0"; - sha256 = "023wnayv1gddklnsh3qv7i5jfy2fisbp24wa0nzjg0nfq3p807yc"; + version = "2.4.1.1"; + sha256 = "0m55ibx7k2wgrqbpci1n667ij0h925ajzggxalq2pj65kmwcmyx3"; description = "A suite of small networking utilities for Unix systems"; diff --git a/third_party/nixpkgs/pkgs/tools/networking/slirp4netns/default.nix b/third_party/nixpkgs/pkgs/tools/networking/slirp4netns/default.nix index c24b9a860e..c08f234ab5 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/slirp4netns/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/slirp4netns/default.nix @@ -12,13 +12,13 @@ stdenv.mkDerivation rec { pname = "slirp4netns"; - version = "1.1.10"; + version = "1.1.11"; src = fetchFromGitHub { owner = "rootless-containers"; repo = "slirp4netns"; rev = "v${version}"; - sha256 = "sha256-Qk5a8h9IkLwYRmPL8pFlyVsQ/xMZ2/wkq8zZ7yfrLEQ="; + sha256 = "sha256-Gxcu9XlLPLcFUoCDrMeWJ6SGUSHU9ZKPHq1oBvmNoJ8="; }; nativeBuildInputs = [ autoreconfHook pkg-config ]; diff --git a/third_party/nixpkgs/pkgs/tools/networking/spiped/default.nix b/third_party/nixpkgs/pkgs/tools/networking/spiped/default.nix index 67ee51d661..8b9d4c9e7b 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/spiped/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/spiped/default.nix @@ -2,33 +2,30 @@ stdenv.mkDerivation rec { pname = "spiped"; - version = "1.5.0"; + version = "1.6.1"; src = fetchurl { url = "https://www.tarsnap.com/spiped/${pname}-${version}.tgz"; - sha256 = "1mxcbxifr3bnj6ga8lz88y4bhff016i6kjdzwbb3gzb2zcs4pxxj"; + sha256 = "8d7089979db79a531a0ecc507b113ac6f2cf5f19305571eff1d3413e0ab33713"; }; buildInputs = [ openssl ]; - patchPhase = '' + postPatch = '' substituteInPlace libcperciva/cpusupport/Build/cpusupport.sh \ + --replace "dirname" "${coreutils}/bin/dirname" \ --replace "2>/dev/null" "2>stderr.log" - substituteInPlace POSIX/posix-l.sh \ + substituteInPlace libcperciva/POSIX/posix-l.sh \ --replace "rm" "${coreutils}/bin/rm" \ - --replace ">/dev/stderr" ">stderr.log" \ --replace "2>/dev/null" "2>stderr.log" - - substituteInPlace POSIX/posix-cflags.sh \ - --replace "rm" "${coreutils}/bin/rm" \ - --replace ">/dev/stderr" ">stderr.log" \ - --replace "2>/dev/null" "2>stderr.log" - ''; + ''; installPhase = '' + runHook preInstall mkdir -p $out/bin $out/share/man/man1 make install BINDIR=$out/bin MAN1DIR=$out/share/man/man1 + runHook postInstall ''; meta = { diff --git a/third_party/nixpkgs/pkgs/tools/networking/stevenblack-blocklist/default.nix b/third_party/nixpkgs/pkgs/tools/networking/stevenblack-blocklist/default.nix index f3f3758188..2a907dcf12 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/stevenblack-blocklist/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/stevenblack-blocklist/default.nix @@ -1,7 +1,7 @@ { lib, fetchFromGitHub }: let - version = "3.7.6"; + version = "3.7.10"; in fetchFromGitHub { name = "stevenblack-blocklist-${version}"; @@ -9,7 +9,7 @@ fetchFromGitHub { owner = "StevenBlack"; repo = "hosts"; rev = version; - sha256 = "sha256-zjUdHzsjv16PHXfxTuVC6aNKfh+73dH1AABvq1MArXI="; + sha256 = "sha256-22k52aW7Uu41414tGOHViBM8zxAwoZYY5Mi/TJH9mtE="; meta = with lib; { description = "Unified hosts file with base extensions"; diff --git a/third_party/nixpkgs/pkgs/tools/networking/tinc/pre.nix b/third_party/nixpkgs/pkgs/tools/networking/tinc/pre.nix index 2379338e51..5bd1858c19 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/tinc/pre.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/tinc/pre.nix @@ -2,24 +2,16 @@ stdenv.mkDerivation rec { pname = "tinc"; - version = "1.1pre17"; + version = "1.1pre18"; src = fetchgit { - rev = "refs/tags/release-${version}"; + rev = "release-${version}"; url = "git://tinc-vpn.org/tinc"; - sha256 = "12abmx9qglchgn94a1qwgzldf2kaz77p8705ylpggzyncxv6bw2q"; + sha256 = "0a7d1xg34p54sv66lckn8rz2bpg7bl01najm2rxiwbsm956y7afm"; }; outputs = [ "out" "man" "info" ]; - patches = [ - (fetchpatch { - name = "tinc-openssl-1.0.2r.patch"; - url = "http://git.tinc-vpn.org/git/browse?p=tinc;a=patch;h=2b0aeec02d64bb4724da9ff1dbc19b7d35d7c904"; - sha256 = "0kidzlmgl0cin4g54ygcxa0jbq9vwlk3dyq5f65nkjd8yvayfzi8"; - }) - ]; - nativeBuildInputs = [ autoreconfHook texinfo ]; buildInputs = [ ncurses readline zlib lzo openssl ]; diff --git a/third_party/nixpkgs/pkgs/tools/networking/updog/default.nix b/third_party/nixpkgs/pkgs/tools/networking/updog/default.nix new file mode 100644 index 0000000000..22942891d6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/networking/updog/default.nix @@ -0,0 +1,26 @@ +{ lib, python3Packages }: + +python3Packages.buildPythonApplication rec { + pname = "updog"; + version = "1.4"; + + src = python3Packages.fetchPypi { + inherit pname version; + sha256 = "7n/ddjF6eJklo+T79+/zBxSHryebc2W9gxwxsb2BbF4="; + }; + + propagatedBuildInputs = with python3Packages; [ + colorama flask flask-httpauth werkzeug pyopenssl + ]; + + checkPhase = '' + $out/bin/updog --help > /dev/null + ''; + + meta = with lib; { + description = "Updog is a replacement for Python's SimpleHTTPServer"; + homepage = "https://github.com/sc0tfree/updog"; + license = licenses.mit; + maintainers = with maintainers; [ ethancedwards8 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/networking/v2ray/default.nix b/third_party/nixpkgs/pkgs/tools/networking/v2ray/default.nix index 4c4b46c252..8c82c379c3 100644 --- a/third_party/nixpkgs/pkgs/tools/networking/v2ray/default.nix +++ b/third_party/nixpkgs/pkgs/tools/networking/v2ray/default.nix @@ -3,22 +3,22 @@ }: let - version = "4.39.2"; + version = "4.41.0"; src = fetchFromGitHub { owner = "v2fly"; repo = "v2ray-core"; rev = "v${version}"; - sha256 = "0rgwxsix2qy5w44s2ramalsn1bqznj2yra8bakcms8yl9yh0gbvd"; + sha256 = "1300gl6y94i1488ja6kic0m5fa2qxakbdc06qd0lgkg6inzbm6gz"; }; - vendorSha256 = "sha256-1LEKg9kyF4QBrzLP5TyKmFLPBprJRNqGxtkAI1mHx4Y="; + vendorSha256 = "sha256-oHKXDzufvTzOzBqFjBzu3vCwTF/FJMomopY3cUktwiM="; assets = { # MIT licensed "geoip.dat" = let - geoipRev = "202105270041"; - geoipSha256 = "0g67lggc41himpnbbghm4xlnbv4dl2fyidxplh3pl6ajqb4wxwd5"; + geoipRev = "202106240309"; + geoipSha256 = "0ypydpgvizf9pfdxna3f6fqn1svsrkac0p3j9s63y55gbqpglacq"; in fetchurl { url = "https://github.com/v2fly/geoip/releases/download/${geoipRev}/geoip.dat"; sha256 = geoipSha256; @@ -26,8 +26,8 @@ let # MIT licensed "geosite.dat" = let - geositeRev = "20210527065138"; - geositeSha256 = "1335zyc5zrwws46ldv0sqn51kpkfwfksbfw6hd53fakz0whxki0g"; + geositeRev = "20210626145509"; + geositeSha256 = "0skhwwlzlyh8rvzyblg1l2xw1bawqs12i6zw5sv3d55pnw7wmf2z"; in fetchurl { url = "https://github.com/v2fly/domain-list-community/releases/download/${geositeRev}/dlc.dat"; sha256 = geositeSha256; diff --git a/third_party/nixpkgs/pkgs/tools/networking/vpnc-scripts/default.nix b/third_party/nixpkgs/pkgs/tools/networking/vpnc-scripts/default.nix new file mode 100644 index 0000000000..734c6d9f4e --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/networking/vpnc-scripts/default.nix @@ -0,0 +1,41 @@ +{ lib, stdenv, fetchgit +, makeWrapper +, nettools, gawk, systemd, openresolv, coreutils, gnugrep +}: + +stdenv.mkDerivation { + pname = "vpnc-scripts"; + version = "unstable-2021-03-21"; + src = fetchgit { + url = "git://git.infradead.org/users/dwmw2/vpnc-scripts.git"; + rev = "8fff06090ed193c4a7285e9a10b42e6679e8ecf3"; + sha256 = "14bzzpwz7kdmlbx825h6s4jjdml9q6ziyrq8311lp8caql68qdq1"; + }; + + nativeBuildInputs = [ makeWrapper ]; + + installPhase = '' + mkdir -p $out/bin + cp vpnc-script $out/bin + ''; + + preFixup = '' + substituteInPlace $out/bin/vpnc-script \ + --replace "which" "type -P" + '' + lib.optionalString stdenv.isLinux '' + substituteInPlace $out/bin/vpnc-script \ + --replace "/sbin/resolvconf" "${openresolv}/bin/resolvconf" \ + --replace "/usr/bin/resolvectl" "${systemd}/bin/resolvectl" + '' + '' + wrapProgram $out/bin/vpnc-script \ + --prefix PATH : "${lib.makeBinPath ([ nettools gawk coreutils gnugrep ] ++ lib.optionals stdenv.isLinux [ openresolv ])}" + ''; + + meta = with lib; { + description = "script for vpnc to configure the network routing and name service"; + homepage = "https://www.infradead.org/openconnect/"; + license = licenses.gpl2Only; + maintainers = with maintainers; [ jerith666 ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/package-management/cargo-release/default.nix b/third_party/nixpkgs/pkgs/tools/package-management/cargo-release/default.nix index da57ae3471..bfe003c489 100644 --- a/third_party/nixpkgs/pkgs/tools/package-management/cargo-release/default.nix +++ b/third_party/nixpkgs/pkgs/tools/package-management/cargo-release/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "cargo-release"; - version = "0.13.11"; + version = "0.15.0"; src = fetchFromGitHub { owner = "sunng87"; repo = "cargo-release"; rev = "v${version}"; - sha256 = "sha256-v0XKLwxUIxBt9hIUzprz+VsxCRifH1/SbNcI0sH2ENM="; + sha256 = "sha256-hEpPRAUPHz9lDTJLyDMUAS+dH6hlppvi3Bb3ahnYW9U="; }; - cargoSha256 = "sha256-zbET6UsV29hAL83rw3XRgrcM5FABFNI3w3Kbd61FS7E="; + cargoSha256 = "sha256-tOiralZWA21HBTxYWVB1LZH2ArfgY7HB45dVqHoXe/Q="; nativeBuildInputs = [ pkg-config ]; buildInputs = [ openssl ] diff --git a/third_party/nixpkgs/pkgs/tools/package-management/libdnf/default.nix b/third_party/nixpkgs/pkgs/tools/package-management/libdnf/default.nix index ae9a8714b8..7a421aaeeb 100644 --- a/third_party/nixpkgs/pkgs/tools/package-management/libdnf/default.nix +++ b/third_party/nixpkgs/pkgs/tools/package-management/libdnf/default.nix @@ -3,13 +3,13 @@ gcc9Stdenv.mkDerivation rec { pname = "libdnf"; - version = "0.62.0"; + version = "0.63.1"; src = fetchFromGitHub { owner = "rpm-software-management"; repo = pname; rev = version; - sha256 = "sha256-Se15VmBbzt/NASjrA25RdpHDVIG/GOSqn6ibpBe752g="; + sha256 = "sha256-SwkqFSAl99fQoXT96BPRqKFqJg3HEziiT+jXcugPyxM="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/tools/package-management/nix-prefetch/default.nix b/third_party/nixpkgs/pkgs/tools/package-management/nix-prefetch/default.nix index 320d41068c..b9ae0b5b4b 100644 --- a/third_party/nixpkgs/pkgs/tools/package-management/nix-prefetch/default.nix +++ b/third_party/nixpkgs/pkgs/tools/package-management/nix-prefetch/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchFromGitHub, installShellFiles, makeWrapper, asciidoc , docbook_xml_dtd_45, git, docbook_xsl, libxml2, libxslt, coreutils, gawk -, gnugrep, gnused, jq, nix }: +, gnugrep, gnused, jq, nix, fetchpatch }: let binPath = lib.makeBinPath [ coreutils gawk git gnugrep gnused jq nix ]; @@ -20,6 +20,14 @@ in stdenv.mkDerivation rec { ''; }; + patches = [ + # Fix input_type regex for macOS systems: https://github.com/msteen/nix-prefetch/pull/24 + (fetchpatch { + url = "https://github.com/msteen/nix-prefetch/commit/08282891bdb108e886eaf39be2030ba1feda1cb1.patch"; + sha256 = "1v6ask54ind6f3784pbncv0dfg6draaaicg0q46jfvp0lafms70x"; + }) + ]; + postPatch = '' lib=$out/lib/${pname} diff --git a/third_party/nixpkgs/pkgs/tools/package-management/nix/default.nix b/third_party/nixpkgs/pkgs/tools/package-management/nix/default.nix index 5f139a1b3b..6ba5135fdd 100644 --- a/third_party/nixpkgs/pkgs/tools/package-management/nix/default.nix +++ b/third_party/nixpkgs/pkgs/tools/package-management/nix/default.nix @@ -24,6 +24,8 @@ common = , withLibseccomp ? lib.meta.availableOn stdenv.hostPlatform libseccomp, libseccomp , withAWS ? !enableStatic && (stdenv.isLinux || stdenv.isDarwin), aws-sdk-cpp , enableStatic ? stdenv.hostPlatform.isStatic + , enableDocumentation ? lib.versionOlder version "2.4pre" || + stdenv.hostPlatform == stdenv.buildPlatform , pname, version, suffix ? "", src , patches ? [ ] }: @@ -36,16 +38,20 @@ common = VERSION_SUFFIX = suffix; - outputs = [ "out" "dev" "man" "doc" ]; + outputs = + [ "out" "dev" ] + ++ lib.optionals enableDocumentation [ "man" "doc" ]; nativeBuildInputs = [ pkg-config ] ++ lib.optionals stdenv.isLinux [ util-linuxMinimal ] + ++ lib.optionals (is24 && enableDocumentation) [ + (lib.getBin lowdown) mdbook + ] ++ lib.optionals is24 [ autoreconfHook autoconf-archive bison flex - (lib.getBin lowdown) mdbook jq ]; @@ -93,14 +99,12 @@ common = patchelf --set-rpath $out/lib:${stdenv.cc.cc.lib}/lib $out/lib/libboost_thread.so.* ''} '' + - # On all versions before c9f51e87057652db0013289a95deffba495b35e7, - # released with 2.3.8, we need to patch around an issue where the Nix - # configure step pulls in the build system's bash and other utilities - # when cross-compiling. + # On all versions before c9f51e87057652db0013289a95deffba495b35e7, which + # removes config.nix entirely and is not present in 2.3.x, we need to + # patch around an issue where the Nix configure step pulls in the build + # system's bash and other utilities when cross-compiling. lib.optionalString ( - stdenv.buildPlatform != stdenv.hostPlatform && - (lib.versionOlder "2.3.8" version && !is24) - # The additional is24 condition is required as versionOlder doesn't understand nixUnstable version strings + stdenv.buildPlatform != stdenv.hostPlatform && !is24 ) '' mkdir tmp/ substitute corepkgs/config.nix.in tmp/config.nix.in \ @@ -120,6 +124,7 @@ common = "--sysconfdir=${confDir}" "--enable-gc" ] + ++ lib.optional (!enableDocumentation) "--disable-doc-gen" ++ lib.optionals (!is24) [ # option was removed in 2.4 "--disable-init-state" @@ -162,7 +167,7 @@ common = license = lib.licenses.lgpl2Plus; maintainers = [ lib.maintainers.eelco ]; platforms = lib.platforms.unix; - outputsToInstall = [ "out" "man" ]; + outputsToInstall = [ "out" ] ++ lib.optional enableDocumentation "man"; }; passthru = { diff --git a/third_party/nixpkgs/pkgs/tools/package-management/nixpkgs-review/default.nix b/third_party/nixpkgs/pkgs/tools/package-management/nixpkgs-review/default.nix index 3bfb89fe10..35606a7134 100644 --- a/third_party/nixpkgs/pkgs/tools/package-management/nixpkgs-review/default.nix +++ b/third_party/nixpkgs/pkgs/tools/package-management/nixpkgs-review/default.nix @@ -7,13 +7,13 @@ python3.pkgs.buildPythonApplication rec { pname = "nixpkgs-review"; - version = "2.6.0"; + version = "2.6.1"; src = fetchFromGitHub { owner = "Mic92"; repo = "nixpkgs-review"; rev = version; - sha256 = "sha256-096oSvc9DidURGKE0FNEBOQz82+RGg6aJo8o9HhaSp0="; + sha256 = "sha256-wDGmkydBLb3Wij1hjWExgHxva/03vJFqAK5zGH9yUn4="; }; makeWrapperArgs = [ diff --git a/third_party/nixpkgs/pkgs/tools/package-management/protontricks/default.nix b/third_party/nixpkgs/pkgs/tools/package-management/protontricks/default.nix index db76c9913f..cbe10e85f6 100644 --- a/third_party/nixpkgs/pkgs/tools/package-management/protontricks/default.nix +++ b/third_party/nixpkgs/pkgs/tools/package-management/protontricks/default.nix @@ -12,13 +12,13 @@ buildPythonApplication rec { pname = "protontricks"; - version = "1.5.1"; + version = "1.5.2"; src = fetchFromGitHub { owner = "Matoking"; repo = pname; rev = version; - hash = "sha256-SrBPqGRIsP0+ZWDe96sqjqCpJoY3Sn3VoPpMw7ellC0="; + hash = "sha256-Vmxb8SjPhcSqFzykHRPsLtAoSwomN+se+icwHkucbX8="; }; patches = [ diff --git a/third_party/nixpkgs/pkgs/tools/package-management/protontricks/steam-run.patch b/third_party/nixpkgs/pkgs/tools/package-management/protontricks/steam-run.patch index 76b7b7f603..82ddec1abb 100644 --- a/third_party/nixpkgs/pkgs/tools/package-management/protontricks/steam-run.patch +++ b/third_party/nixpkgs/pkgs/tools/package-management/protontricks/steam-run.patch @@ -69,7 +69,7 @@ index cc65a03..5c3fc7a 100755 # Pass the command directly into the shell *without* # escaping it diff --git a/src/protontricks/steam.py b/src/protontricks/steam.py -index f9fb9ec..e1e588a 100644 +index 4ab778b..f3f5f99 100644 --- a/src/protontricks/steam.py +++ b/src/protontricks/steam.py @@ -12,8 +12,8 @@ from .util import lower_dict @@ -81,9 +81,9 @@ index f9fb9ec..e1e588a 100644 + "get_appinfo_sections", "get_proton_appid", + "find_steam_proton_app", "find_appid_proton_prefix", "find_proton_app", "get_steam_lib_paths", "get_compat_tool_dirs", - "get_proton_installations", "get_custom_proton_installations", + "get_custom_proton_installations_in_dir", "get_custom_proton_installations", "find_current_steamid3", "get_appid_from_shortcut", -@@ -286,37 +286,6 @@ def find_steam_path(): +@@ -300,37 +300,6 @@ def find_steam_path(): return None, None @@ -122,7 +122,7 @@ index f9fb9ec..e1e588a 100644 APPINFO_STRUCT_SECTION = " 5.2.2) activerecord (~> 5.2.2) activesupport (~> 5.2.2) @@ -31,9 +31,9 @@ GIT metasploit-concern (~> 3.0.0) metasploit-credential (~> 4.0.0) metasploit-model (~> 3.1.0) - metasploit-payloads (= 2.0.45) + metasploit-payloads (= 2.0.47) metasploit_data_models (~> 4.1.0) - metasploit_payloads-mettle (= 1.0.9) + metasploit_payloads-mettle (= 1.0.10) mqtt msgpack nessus_rest @@ -125,22 +125,22 @@ GEM arel-helpers (2.12.0) activerecord (>= 3.1.0, < 7) aws-eventstream (1.1.1) - aws-partitions (1.465.0) - aws-sdk-core (3.114.1) + aws-partitions (1.469.0) + aws-sdk-core (3.114.3) aws-eventstream (~> 1, >= 1.0.2) aws-partitions (~> 1, >= 1.239.0) aws-sigv4 (~> 1.1) jmespath (~> 1.0) - aws-sdk-ec2 (1.240.0) + aws-sdk-ec2 (1.244.0) aws-sdk-core (~> 3, >= 3.112.0) aws-sigv4 (~> 1.1) aws-sdk-iam (1.55.0) aws-sdk-core (~> 3, >= 3.112.0) aws-sigv4 (~> 1.1) - aws-sdk-kms (1.43.0) + aws-sdk-kms (1.44.0) aws-sdk-core (~> 3, >= 3.112.0) aws-sigv4 (~> 1.1) - aws-sdk-s3 (1.96.0) + aws-sdk-s3 (1.96.1) aws-sdk-core (~> 3, >= 3.112.0) aws-sdk-kms (~> 1) aws-sigv4 (~> 1.1) @@ -192,7 +192,7 @@ GEM hashery (2.1.2) hrr_rb_ssh (0.3.0.pre2) ed25519 (~> 1.2) - http-cookie (1.0.3) + http-cookie (1.0.4) domain_name (~> 0.5) http_parser.rb (0.6.0) i18n (1.8.10) @@ -204,7 +204,7 @@ GEM jsobfu (0.4.2) rkelly-remix json (2.5.1) - loofah (2.9.1) + loofah (2.10.0) crass (~> 1.0.2) nokogiri (>= 1.5.9) metasm (1.0.4) @@ -226,7 +226,7 @@ GEM activemodel (~> 5.2.2) activesupport (~> 5.2.2) railties (~> 5.2.2) - metasploit-payloads (2.0.45) + metasploit-payloads (2.0.47) metasploit_data_models (4.1.4) activerecord (~> 5.2.2) activesupport (~> 5.2.2) @@ -237,7 +237,7 @@ GEM railties (~> 5.2.2) recog (~> 2.0) webrick - metasploit_payloads-mettle (1.0.9) + metasploit_payloads-mettle (1.0.10) method_source (1.0.0) mini_portile2 (2.5.3) minitest (5.14.4) @@ -265,7 +265,7 @@ GEM pcaprub patch_finder (1.0.2) pcaprub (0.13.0) - pdf-reader (2.4.2) + pdf-reader (2.5.0) Ascii85 (~> 1.0) afm (~> 0.2.1) hashery (~> 2.0) @@ -391,7 +391,7 @@ GEM warden (1.2.9) rack (>= 2.0.9) webrick (1.7.0) - websocket-driver (0.7.4) + websocket-driver (0.7.5) websocket-extensions (>= 0.1.0) websocket-extensions (0.1.5) windows_error (0.1.2) diff --git a/third_party/nixpkgs/pkgs/tools/security/metasploit/default.nix b/third_party/nixpkgs/pkgs/tools/security/metasploit/default.nix index fe435a5be4..b8ad99b917 100644 --- a/third_party/nixpkgs/pkgs/tools/security/metasploit/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/metasploit/default.nix @@ -8,13 +8,13 @@ let }; in stdenv.mkDerivation rec { pname = "metasploit-framework"; - version = "6.0.47"; + version = "6.0.50"; src = fetchFromGitHub { owner = "rapid7"; repo = "metasploit-framework"; rev = version; - sha256 = "sha256-lK8FtHc4VLvp6bEYAw7cqHgbjQP2RS5+XxtjaVMiVWg="; + sha256 = "sha256-ZtIpkUt3jIhe4st8JlxE0rvLe6P+QBGdjyTL13Avwj0="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/tools/security/metasploit/gemset.nix b/third_party/nixpkgs/pkgs/tools/security/metasploit/gemset.nix index 0f6b54632e..7f43161b5b 100644 --- a/third_party/nixpkgs/pkgs/tools/security/metasploit/gemset.nix +++ b/third_party/nixpkgs/pkgs/tools/security/metasploit/gemset.nix @@ -114,30 +114,30 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0fs3fy6k4wmzh0z6c4rl313f5px81pj0viqxj1prksza4j7iymmi"; + sha256 = "0xh65jmz3s12kfi7ij0j89d638nzdvq4z6dq9amzgmiw09ycvdbr"; type = "gem"; }; - version = "1.465.0"; + version = "1.469.0"; }; aws-sdk-core = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "09ksnsj7jqb339fy4nh6v8zn9gy77vbyjpsiv33r35q82ivi32z2"; + sha256 = "10wk5y4flc04cc42cmcfgr9sj67mz4582d45xmll56mpz4cw5cfc"; type = "gem"; }; - version = "3.114.1"; + version = "3.114.3"; }; aws-sdk-ec2 = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0wqrvs49nzr2n9ilbjz61ac61d4d8wwpmzfaawhhq7l4hmwm4pdr"; + sha256 = "0xnpxgcmacmqs98swlv3qkg7svpwydb1kqsngqciyg3jddzxrzp6"; type = "gem"; }; - version = "1.240.0"; + version = "1.244.0"; }; aws-sdk-iam = { groups = ["default"]; @@ -154,20 +154,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "01pd0f4srsa65zl4zq4014p9j5yrr2yy9h9ab17g3w9d0qqm2vsh"; + sha256 = "0407yggwsy89fzh387vq3af5azplci5v0a8y97h7r6da4jrv1ksm"; type = "gem"; }; - version = "1.43.0"; + version = "1.44.0"; }; aws-sdk-s3 = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1g46v19n6pxa60x7fih2y9zc18q23kdjkb1p2qr33zmi6cz76cc4"; + sha256 = "0q28bdmpm2c2fw9wh00zhqxnb8p2nzdfi5l6wwa6bl63fm28816h"; type = "gem"; }; - version = "1.96.0"; + version = "1.96.1"; }; aws-sigv4 = { groups = ["default"]; @@ -454,10 +454,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "004cgs4xg5n6byjs7qld0xhsjq3n6ydfh897myr2mibvh6fjc49g"; + sha256 = "19370bc97gsy2j4hanij246hv1ddc85hw0xjb6sj7n1ykqdlx9l9"; type = "gem"; }; - version = "1.0.3"; + version = "1.0.4"; }; "http_parser.rb" = { groups = ["default"]; @@ -534,10 +534,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1w9mbii8515p28xd4k72f3ab2g6xiyq15497ys5r8jn6m355lgi7"; + sha256 = "19vkaazjqyq7yj5ah8rpr4vl9n4mg95scdr5im93akhd5bjvkkly"; type = "gem"; }; - version = "2.9.1"; + version = "2.10.0"; }; metasm = { groups = ["default"]; @@ -574,12 +574,12 @@ platforms = []; source = { fetchSubmodules = false; - rev = "6416bc1a2867938dd39705a3daef25bc5dedfd16"; - sha256 = "0s2m499njqqvbxz2wign0f6iny58vh70665ix7lvnm1qfys0bbwl"; + rev = "2e07122e80d8ae23e6aa53ae0fcb9dfca6639c59"; + sha256 = "0zxyr1r88qslw6ypjqxx188vhmikl94fmkcdg3phm8r71qa375da"; type = "git"; url = "https://github.com/rapid7/metasploit-framework"; }; - version = "6.0.47"; + version = "6.0.49"; }; metasploit-model = { groups = ["default"]; @@ -596,10 +596,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "09w5r7g19n845h9ii66h8cx9ikgv69d59ry67183h7c76mhzvm9c"; + sha256 = "0jxa9q8jzfy91i4khnzmd36p3g2sq7df34csgwbmv6caarzs7732"; type = "gem"; }; - version = "2.0.45"; + version = "2.0.47"; }; metasploit_data_models = { groups = ["default"]; @@ -616,10 +616,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "07l2ahb4c5ay6s5vbcfmipmya2qdj8i29blxk9vdmvs27yzkc8jk"; + sha256 = "12mm3bqcirbzn7337zg96w79i6in49z2gmg41cwjywi1p2iawk61"; type = "gem"; }; - version = "1.0.9"; + version = "1.0.10"; }; method_source = { groups = ["default"]; @@ -836,10 +836,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1cxladxy18dhk4a3b263crq8hyxb3q0c7ifxrb5nr1bs6y0pk8i6"; + sha256 = "14cxj3ra9nnn334qpm2vsx9s0zk3095s8ih6cwcp47h3hv03c73y"; type = "gem"; }; - version = "2.4.2"; + version = "2.5.0"; }; pg = { groups = ["default"]; @@ -1426,10 +1426,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0l1wmvs0yf8gz64rymijx2pygwch99qdci91q8j193fwrz22bp7x"; + sha256 = "0a3bwxd9v3ghrxzjc4vxmf4xa18c6m4xqy5wb0yk5c6b9psc7052"; type = "gem"; }; - version = "0.7.4"; + version = "0.7.5"; }; websocket-extensions = { groups = ["default"]; diff --git a/third_party/nixpkgs/pkgs/tools/security/naabu/default.nix b/third_party/nixpkgs/pkgs/tools/security/naabu/default.nix index a2295d87fe..da59867e1b 100644 --- a/third_party/nixpkgs/pkgs/tools/security/naabu/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/naabu/default.nix @@ -6,16 +6,16 @@ buildGoModule rec { pname = "naabu"; - version = "2.0.3"; + version = "2.0.4"; src = fetchFromGitHub { owner = "projectdiscovery"; repo = "naabu"; rev = "v${version}"; - sha256 = "05iybf7q3y0piyw202yzld89fiz2dv2pmnpm1pd905phk5a23n1x"; + sha256 = "sha256-t5Ij3UeH3z8obOH90cnmwcX9iC97sH7VIKvannSZ+MM="; }; - vendorSha256 = "111qvkqdcdgir3dz267xckzlnfx72flnyi7ki7fa6ml7mkfyf70y"; + vendorSha256 = "sha256-veOIt3hELk3smrGlTyldtdaz5uI4U8/2SeD0UNykB8A="; buildInputs = [ libpcap ]; diff --git a/third_party/nixpkgs/pkgs/tools/security/nuclei/default.nix b/third_party/nixpkgs/pkgs/tools/security/nuclei/default.nix index 2e32940657..e4c6039c45 100644 --- a/third_party/nixpkgs/pkgs/tools/security/nuclei/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/nuclei/default.nix @@ -5,16 +5,16 @@ buildGoModule rec { pname = "nuclei"; - version = "2.3.7"; + version = "2.3.8"; src = fetchFromGitHub { owner = "projectdiscovery"; repo = pname; rev = "v${version}"; - sha256 = "sha256-loViPW84KdAOJbL8oUJeiON1f6vrZTcYXRP2VBMNkGk="; + sha256 = "sha256-MrAJHYfTcziHTKJYRB6FW23XcHqdr9AGF+Cumw7hbcQ="; }; - vendorSha256 = "sha256-HBpKaRI7gcWp13GVxTlnZvvTyRncfLmu0NmwAUyQ4hQ="; + vendorSha256 = "sha256-ZzpmHoMkrDAZcMXtD6smEaFEmT/EnRcKd7XYz/IK72Y="; modRoot = "./v2"; subPackages = [ diff --git a/third_party/nixpkgs/pkgs/tools/security/nwipe/default.nix b/third_party/nixpkgs/pkgs/tools/security/nwipe/default.nix index 81ed9849be..eb87e8cba8 100644 --- a/third_party/nixpkgs/pkgs/tools/security/nwipe/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/nwipe/default.nix @@ -9,13 +9,13 @@ stdenv.mkDerivation rec { pname = "nwipe"; - version = "0.30"; + version = "0.31"; src = fetchFromGitHub { owner = "martijnvanbrummelen"; repo = "nwipe"; rev = "v${version}"; - sha256 = "sha256-cNZMFnk4L95jKTyGEUN3DlAChUNZlIjDdZqkkwPjehE="; + sha256 = "sha256-+xwQLjl0jhven6udfCprRKW8qWM6JMh5MOZ+ZdaJWQg="; }; nativeBuildInputs = [ diff --git a/third_party/nixpkgs/pkgs/tools/security/pass/clip-wayland-support.patch b/third_party/nixpkgs/pkgs/tools/security/pass/clip-wayland-support.patch deleted file mode 100644 index 7b8d2eb010..0000000000 --- a/third_party/nixpkgs/pkgs/tools/security/pass/clip-wayland-support.patch +++ /dev/null @@ -1,113 +0,0 @@ -From b0b784b1a57c0b06936e6f5d6560712b4b810cd3 Mon Sep 17 00:00:00 2001 -From: Brett Cornwall -Date: Wed, 27 Feb 2019 00:08:33 -0700 -Subject: clip: Add support for wl-clipboard - -Edited to properly apply with -`set-correct-program-name-for-sleep.patch`. - ---- - README | 4 +++- - man/pass.1 | 5 +++++ - src/password-store.sh | 26 +++++++++++++++++++++----- - 3 files changed, 29 insertions(+), 6 deletions(-) - -diff --git a/README b/README -index 6b59965..1a46242 100644 ---- a/README -+++ b/README -@@ -19,8 +19,10 @@ Depends on: - http://www.gnupg.org/ - - git - http://www.git-scm.com/ --- xclip -+- xclip (for X11 environments) - http://sourceforge.net/projects/xclip/ -+- wl-clipboard (for wlroots Wayland-based environments) -+ https://github.com/bugaevc/wl-clipboard - - tree >= 1.7.0 - http://mama.indstate.edu/users/ice/tree/ - - GNU getopt -diff --git a/man/pass.1 b/man/pass.1 -index 01a3fbe..a555dcb 100644 ---- a/man/pass.1 -+++ b/man/pass.1 -@@ -99,6 +99,8 @@ Decrypt and print a password named \fIpass-name\fP. If \fI--clip\fP or \fI-c\fP - is specified, do not print the password but instead copy the first (or otherwise specified) - line to the clipboard using - .BR xclip (1) -+or -+.BR wl-clipboard(1) - and then restore the clipboard after 45 (or \fIPASSWORD_STORE_CLIP_TIME\fP) seconds. If \fI--qrcode\fP - or \fI-q\fP is specified, do not print the password but instead display a QR code using - .BR qrencode (1) -@@ -132,6 +134,8 @@ in generating passwords can be changed with the \fIPASSWORD_STORE_CHARACTER_SET\ - If \fI--clip\fP or \fI-c\fP is specified, do not print the password but instead copy - it to the clipboard using - .BR xclip (1) -+or -+.BR wl-clipboard(1) - and then restore the clipboard after 45 (or \fIPASSWORD_STORE_CLIP_TIME\fP) seconds. If \fI--qrcode\fP - or \fI-q\fP is specified, do not print the password but instead display a QR code using - .BR qrencode (1) -@@ -466,6 +470,7 @@ The location of the text editor used by \fBedit\fP. - .BR tr (1), - .BR git (1), - .BR xclip (1), -+.BR wl-clipboard (1), - .BR qrencode (1). - - .SH AUTHOR -diff --git a/src/password-store.sh b/src/password-store.sh -index d89d455..284eabf 100755 ---- a/src/password-store.sh -+++ b/src/password-store.sh -@@ -152,16 +152,32 @@ check_sneaky_paths() { - # - - clip() { -+ if [[ -n $WAYLAND_DISPLAY ]]; then -+ local copy_cmd=( wl-copy ) -+ local paste_cmd=( wl-paste -n ) -+ if [[ $X_SELECTION == primary ]]; then -+ copy_cmd+=( --primary ) -+ paste_cmd+=( --primary ) -+ fi -+ local display_name="$WAYLAND_DISPLAY" -+ elif [[ -n $DISPLAY ]]; then -+ local copy_cmd=( xclip -selection "$X_SELECTION" ) -+ local paste_cmd=( xclip -o -selection "$X_SELECTION" ) -+ local display_name="$DISPLAY" -+ else -+ die "Error: No X11 or Wayland display detected" -+ fi -+ local sleep_argv0="password store sleep on display $display_name" -+ - # This base64 business is because bash cannot store binary data in a shell - # variable. Specifically, it cannot store nulls nor (non-trivally) store - # trailing new lines. -- local sleep_argv0="password store sleep on display $DISPLAY" - pkill -P $(pgrep -f "^$sleep_argv0") 2>/dev/null && sleep 0.5 -- local before="$(xclip -o -selection "$X_SELECTION" 2>/dev/null | $BASE64)" -- echo -n "$1" | xclip -selection "$X_SELECTION" || die "Error: Could not copy data to the clipboard" -+ local before="$("${paste_cmd[@]}" 2>/dev/null | $BASE64)" -+ echo -n "$1" | "${copy_cmd[@]}" || die "Error: Could not copy data to the clipboard" - ( - ( exec -a "$sleep_argv0" bash <(echo trap 'kill %1' TERM\; sleep "$CLIP_TIME & wait") ) -- local now="$(xclip -o -selection "$X_SELECTION" | $BASE64)" -+ local now="$("${paste_cmd[@]}" | $BASE64)" - [[ $now != $(echo -n "$1" | $BASE64) ]] && before="$now" - - # It might be nice to programatically check to see if klipper exists, -@@ -173,7 +189,7 @@ clip() { - # so we axe it here: - qdbus org.kde.klipper /klipper org.kde.klipper.klipper.clearClipboardHistory &>/dev/null - -- echo "$before" | $BASE64 -d | xclip -selection "$X_SELECTION" -+ echo "$before" | $BASE64 -d | "${copy_cmd[@]}" - ) >/dev/null 2>&1 & disown - echo "Copied $2 to clipboard. Will clear in $CLIP_TIME seconds." - } --- -cgit v1.2.1-28-gf32c - diff --git a/third_party/nixpkgs/pkgs/tools/security/pass/default.nix b/third_party/nixpkgs/pkgs/tools/security/pass/default.nix index a7872c50fb..7468b5dcc8 100644 --- a/third_party/nixpkgs/pkgs/tools/security/pass/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/pass/default.nix @@ -3,8 +3,9 @@ , which, procps , qrencode , makeWrapper, pass, symlinkJoin , xclip ? null, xdotool ? null, dmenu ? null -, x11Support ? !stdenv.isDarwin , dmenuSupport ? x11Support +, x11Support ? !stdenv.isDarwin , dmenuSupport ? (x11Support || waylandSupport) , waylandSupport ? false, wl-clipboard ? null +, ydotool ? null, dmenu-wayland ? null # For backwards-compatibility , tombPluginSupport ? false @@ -13,13 +14,15 @@ with lib; assert x11Support -> xclip != null; - -assert dmenuSupport -> dmenu != null - && xdotool != null - && x11Support; - assert waylandSupport -> wl-clipboard != null; +assert dmenuSupport -> x11Support || waylandSupport; +assert dmenuSupport && x11Support + -> dmenu != null && xdotool != null; +assert dmenuSupport && waylandSupport + -> dmenu-wayland != null && ydotool != null; + + let passExtensions = import ./extensions { inherit pkgs; }; @@ -52,21 +55,18 @@ let in stdenv.mkDerivation rec { - version = "1.7.3"; + version = "1.7.4"; pname = "password-store"; src = fetchurl { url = "https://git.zx2c4.com/password-store/snapshot/${pname}-${version}.tar.xz"; - sha256 = "1x53k5dn3cdmvy8m4fqdld4hji5n676ksl0ql4armkmsds26av1b"; + sha256 = "1h4k6w7g8pr169p5w9n6mkdhxl3pw51zphx7www6pvgjb7vgmafg"; }; patches = [ ./set-correct-program-name-for-sleep.patch ./extension-dir.patch - ] ++ lib.optional stdenv.isDarwin ./no-darwin-getopt.patch - # TODO (@Ma27) this patch adds support for wl-clipboard and can be removed during the next - # version bump. - ++ lib.optional waylandSupport ./clip-wayland-support.patch; + ] ++ lib.optional stdenv.isDarwin ./no-darwin-getopt.patch; nativeBuildInputs = [ makeWrapper ]; @@ -74,8 +74,7 @@ stdenv.mkDerivation rec { postInstall = '' # Install Emacs Mode. NOTE: We can't install the necessary - # dependencies (s.el and f.el) here. The user has to do this - # himself. + # dependencies (s.el) here. The user has to do this themselves. mkdir -p "$out/share/emacs/site-lisp" cp "contrib/emacs/password-store.el" "$out/share/emacs/site-lisp/" '' + optionalString dmenuSupport '' @@ -96,8 +95,10 @@ stdenv.mkDerivation rec { procps ] ++ optional stdenv.isDarwin openssl ++ optional x11Support xclip - ++ optionals dmenuSupport [ xdotool dmenu ] - ++ optional waylandSupport wl-clipboard); + ++ optional waylandSupport wl-clipboard + ++ optionals (waylandSupport && dmenuSupport) [ ydotool dmenu-wayland ] + ++ optionals (x11Support && dmenuSupport) [ xdotool dmenu ] + ); postFixup = '' # Fix program name in --help diff --git a/third_party/nixpkgs/pkgs/tools/security/pass/extensions/checkup.nix b/third_party/nixpkgs/pkgs/tools/security/pass/extensions/checkup.nix index bafaabba84..5ae846d4a4 100644 --- a/third_party/nixpkgs/pkgs/tools/security/pass/extensions/checkup.nix +++ b/third_party/nixpkgs/pkgs/tools/security/pass/extensions/checkup.nix @@ -1,18 +1,22 @@ { lib, stdenv, fetchFromGitHub -, curl, findutils, gnugrep, gnused }: +, curl, findutils, gnugrep, gnused, shellcheck }: -stdenv.mkDerivation rec { +let pname = "pass-checkup"; - version = "0.2.0"; + version = "0.2.1"; +in stdenv.mkDerivation { + inherit pname version; src = fetchFromGitHub { owner = "etu"; - repo = "pass-checkup"; + repo = pname; rev = version; - sha256 = "17fyf8zj535fg43yddjww1jhxfb3nbdkn622wjxaai2nf46jzh7y"; + sha256 = "18b6rx59r7g0hvqs2affvw0g0jyifyzhanwgz2q2b8nhjgqgnar2"; }; - patchPhase = '' + nativeBuildInputs = [ shellcheck ]; + + postPatch = '' substituteInPlace checkup.bash \ --replace curl ${curl}/bin/curl \ --replace find ${findutils}/bin/find \ @@ -21,13 +25,17 @@ stdenv.mkDerivation rec { ''; installPhase = '' + runHook preInstall + install -D -m755 checkup.bash $out/lib/password-store/extensions/checkup.bash + + runHook postInstall ''; meta = with lib; { description = "A pass extension to check against the Have I been pwned API to see if your passwords are publicly leaked or not"; homepage = "https://github.com/etu/pass-checkup"; - license = licenses.gpl3; + license = licenses.gpl3Plus; maintainers = with maintainers; [ etu ]; platforms = platforms.unix; }; diff --git a/third_party/nixpkgs/pkgs/tools/security/pass/extensions/import.nix b/third_party/nixpkgs/pkgs/tools/security/pass/extensions/import.nix index 7fa9ce3177..60775be180 100644 --- a/third_party/nixpkgs/pkgs/tools/security/pass/extensions/import.nix +++ b/third_party/nixpkgs/pkgs/tools/security/pass/extensions/import.nix @@ -9,37 +9,21 @@ python3Packages.buildPythonApplication rec { pname = "pass-import"; - version = "3.1"; + version = "3.2"; src = fetchFromGitHub { owner = "roddhjav"; repo = "pass-import"; rev = "v${version}"; - sha256 = "sha256-nH2xAqWfMT+Brv3z9Aw6nbvYqArEZjpM28rKsRPihqA="; + sha256 = "0hrpg7yiv50xmbajfy0zdilsyhbj5iv0qnlrgkfv99q1dvd5qy56"; }; - patches = [ - (fetchpatch { - name = "support-for-keepass-4.0.0.patch"; - url = "https://github.com/roddhjav/pass-import/commit/86cfb1bb13a271fefe1e70f24be18e15a83a04d8.patch"; - sha256 = "0mrlblqlmwl9gqs2id4rl4sivrcclsv6zyc6vjqi78kkqmnwzhxh"; - }) - # by default, tries to install scripts/pimport, which is a bash wrapper around "python -m pass_import ..." - # This is a better way to do the same, and takes advantage of the existing Nix python environments - # from https://github.com/roddhjav/pass-import/pull/138 - (fetchpatch { - name = "pass-import-pr-138-pimport-entrypoint.patch"; - url = "https://github.com/roddhjav/pass-import/commit/ccdb6995bee6436992dd80d7b3101f0eb94c59bb.patch"; - sha256 = "sha256-CO8PyWxa4eLuTQBB+jKTImFPlPn+1yt6NBsIp+SPk94="; - }) - ]; - propagatedBuildInputs = with python3Packages; [ cryptography defusedxml pyaml pykeepass - python_magic # similar API to "file-magic", but already in nixpkgs. + python_magic # similar API to "file-magic", but already in nixpkgs. secretstorage ]; @@ -52,20 +36,21 @@ python3Packages.buildPythonApplication rec { disabledTests = [ "test_import_gnome_keyring" # requires dbus, which pytest doesn't support ]; - postCheck = '' - $out/bin/pimport --list-exporters --list-importers - ''; postInstall = '' mkdir -p $out/lib/password-store/extensions - cp ${src}/scripts/import.bash $out/lib/password-store/extensions/import.bash + cp ${src}/import.bash $out/lib/password-store/extensions/import.bash wrapProgram $out/lib/password-store/extensions/import.bash \ - --prefix PATH : "${python3Packages.python.withPackages(_: propagatedBuildInputs)}/bin" \ + --prefix PATH : "${python3Packages.python.withPackages (_: propagatedBuildInputs)}/bin" \ --prefix PYTHONPATH : "$out/${python3Packages.python.sitePackages}" \ --run "export PREFIX" cp -r ${src}/share $out/ ''; + postCheck = '' + $out/bin/pimport --list-exporters --list-importers + ''; + meta = with lib; { description = "Pass extension for importing data from existing password managers"; homepage = "https://github.com/roddhjav/pass-import"; diff --git a/third_party/nixpkgs/pkgs/tools/security/pass/no-darwin-getopt.patch b/third_party/nixpkgs/pkgs/tools/security/pass/no-darwin-getopt.patch index e8f7e138ff..7e8b66dd7f 100644 --- a/third_party/nixpkgs/pkgs/tools/security/pass/no-darwin-getopt.patch +++ b/third_party/nixpkgs/pkgs/tools/security/pass/no-darwin-getopt.patch @@ -1,9 +1,11 @@ -diff -Naur password-store-1.6.5-orig/src/platform/darwin.sh password-store-1.6.5/src/platform/darwin.sh ---- password-store-1.6.5-orig/src/platform/darwin.sh 2015-01-28 16:43:02.000000000 +0000 -+++ password-store-1.6.5/src/platform/darwin.sh 2015-02-15 16:09:02.000000000 +0000 -@@ -31,5 +31,4 @@ - mount -t hfs -o noatime -o nobrowse "$DARWIN_RAMDISK_DEV" "$SECURE_TMPDIR" || die "Error: could not mount filesystem on ramdisk." +diff --git a/src/platform/darwin.sh b/src/platform/darwin.sh +index f6cc471..e2e8bba 100644 +--- a/src/platform/darwin.sh ++++ b/src/platform/darwin.sh +@@ -39,6 +39,5 @@ qrcode() { + fi } --GETOPT="$(brew --prefix gnu-getopt 2>/dev/null || { which port &>/dev/null && echo /opt/local; } || echo /usr/local)/bin/getopt" +-GETOPT="$({ test -x /usr/local/opt/gnu-getopt/bin/getopt && echo /usr/local/opt/gnu-getopt; } || brew --prefix gnu-getopt 2>/dev/null || { which port &>/dev/null && echo /opt/local; } || echo /usr/local)/bin/getopt" SHRED="srm -f -z" + BASE64="openssl base64" diff --git a/third_party/nixpkgs/pkgs/tools/security/pass/set-correct-program-name-for-sleep.patch b/third_party/nixpkgs/pkgs/tools/security/pass/set-correct-program-name-for-sleep.patch index f3a844ad2d..a71a279c1e 100644 --- a/third_party/nixpkgs/pkgs/tools/security/pass/set-correct-program-name-for-sleep.patch +++ b/third_party/nixpkgs/pkgs/tools/security/pass/set-correct-program-name-for-sleep.patch @@ -5,29 +5,10 @@ Subject: [PATCH] Patch the clip() function to work even when using single-binary coreutils --- - src/password-store.sh | 4 ++-- src/platform/cygwin.sh | 4 ++-- src/platform/darwin.sh | 4 ++-- 3 files changed, 6 insertions(+), 6 deletions(-) -diff --git a/src/password-store.sh b/src/password-store.sh -index 7264ffc..68551a4 100755 ---- a/src/password-store.sh -+++ b/src/password-store.sh -@@ -155,11 +155,11 @@ clip() { - # variable. Specifically, it cannot store nulls nor (non-trivally) store - # trailing new lines. - local sleep_argv0="password store sleep on display $DISPLAY" -- pkill -f "^$sleep_argv0" 2>/dev/null && sleep 0.5 -+ pkill -P $(pgrep -f "^$sleep_argv0") 2>/dev/null && sleep 0.5 - local before="$(xclip -o -selection "$X_SELECTION" 2>/dev/null | $BASE64)" - echo -n "$1" | xclip -selection "$X_SELECTION" || die "Error: Could not copy data to the clipboard" - ( -- ( exec -a "$sleep_argv0" bash <<<"trap 'kill %1' TERM; sleep '$CLIP_TIME' & wait" ) -+ ( exec -a "$sleep_argv0" bash <(echo trap 'kill %1' TERM\; sleep "$CLIP_TIME & wait") ) - local now="$(xclip -o -selection "$X_SELECTION" | $BASE64)" - [[ $now != $(echo -n "$1" | $BASE64) ]] && before="$now" - diff --git a/src/platform/cygwin.sh b/src/platform/cygwin.sh index 5a8d5ea..423e0ce 100644 --- a/src/platform/cygwin.sh diff --git a/third_party/nixpkgs/pkgs/tools/security/rekor/default.nix b/third_party/nixpkgs/pkgs/tools/security/rekor/default.nix index b260d46f93..b9b49d4e2d 100644 --- a/third_party/nixpkgs/pkgs/tools/security/rekor/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/rekor/default.nix @@ -1,21 +1,25 @@ { lib, buildGoModule, fetchFromGitHub }: let - generic = { pname, subPackages, description, postInstall }: + generic = { pname, packageToBuild, description }: buildGoModule rec { inherit pname; - version = "0.1.1"; + version = "0.2.0"; src = fetchFromGitHub { owner = "sigstore"; repo = "rekor"; rev = "v${version}"; - sha256 = "1hvkfvc747g5r4h8vb1d8ikqxmlyxsycnlh78agmmjpxlasspmbk"; + sha256 = "1y6qw55r30jgkcwc6434ly0v9dcfa2lc7z5djn7rjcqrjg3gn7yv"; }; - vendorSha256 = "0vdir9ia3hv27rkm6jnvhsfc3mxw36xfvwqnfd34rgzmzcfxlrbv"; + vendorSha256 = "1wlh505ypwyr91wi80fpbap3far3fljwjd4mql2qcqgg0b1yay9s"; - inherit subPackages postInstall; + subPackages = [ packageToBuild ]; + + preBuild = '' + buildFlagsArray+=("-ldflags" "-s -w -X github.com/sigstore/rekor/${packageToBuild}/app.gitVersion=v${version}") + ''; meta = with lib; { inherit description; @@ -28,24 +32,12 @@ let in { rekor-cli = generic { pname = "rekor-cli"; - subPackages = [ "cmd/cli" ]; - # Will not be needed with the next version, the package as been renamed upstream - postInstall = '' - if [ -f "$out/bin/cli" ]; then - mv "$out/bin/cli" "$out/bin/rekor-client" - fi - ''; + packageToBuild = "cmd/rekor-cli"; description = "CLI client for Sigstore, the Signature Transparency Log"; }; rekor-server = generic { pname = "rekor-server"; - subPackages = [ "cmd/server" ]; - # Will not be needed with the next version, the package as been renamed upstream - postInstall = '' - if [ -f "$out/bin/server" ]; then - mv "$out/bin/server" "$out/bin/rekor-server" - fi - ''; + packageToBuild = "cmd/rekor-server"; description = "Sigstore server, the Signature Transparency Log"; }; } diff --git a/third_party/nixpkgs/pkgs/tools/security/rhash/default.nix b/third_party/nixpkgs/pkgs/tools/security/rhash/default.nix index c602ec622c..68bf35a751 100644 --- a/third_party/nixpkgs/pkgs/tools/security/rhash/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/rhash/default.nix @@ -1,4 +1,6 @@ -{ lib, stdenv, fetchFromGitHub, which }: +{ lib, stdenv, fetchFromGitHub, which +, enableStatic ? stdenv.hostPlatform.isStatic +}: stdenv.mkDerivation rec { version = "1.4.1"; @@ -14,13 +16,20 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ which ]; # configure script is not autotools-based, doesn't support these options + dontAddStaticConfigureFlags = true; configurePlatforms = [ ]; + configureFlags = [ + "--ar=${stdenv.cc.targetPrefix}ar" + (lib.enableFeature enableStatic "static") + (lib.enableFeature enableStatic "lib-static") + ]; doCheck = true; checkTarget = "test-full"; - installTargets = [ "install" "install-lib-shared" "install-lib-so-link" "install-lib-headers" ]; + installTargets = [ "install" "install-lib-headers" ] + ++ lib.optional (!enableStatic) "install-lib-so-link"; meta = with lib; { homepage = "http://rhash.sourceforge.net/"; diff --git a/third_party/nixpkgs/pkgs/tools/security/ripasso/cursive.nix b/third_party/nixpkgs/pkgs/tools/security/ripasso/cursive.nix index cc2765bd70..1a4b1de1b1 100644 --- a/third_party/nixpkgs/pkgs/tools/security/ripasso/cursive.nix +++ b/third_party/nixpkgs/pkgs/tools/security/ripasso/cursive.nix @@ -1,32 +1,34 @@ -{ stdenv, lib, rustPlatform, fetchFromGitHub, pkg-config, ncurses, python3, openssl, libgpgerror, gpgme, xorg, AppKit, Security }: +{ stdenv, lib, rustPlatform, fetchFromGitHub, pkg-config, ncurses, python3, openssl, libgpgerror, gpgme, xorg, AppKit, Security, installShellFiles }: with rustPlatform; buildRustPackage rec { - version = "0.4.0"; + version = "0.5.1"; pname = "ripasso-cursive"; src = fetchFromGitHub { owner = "cortex"; repo = "ripasso"; rev = "release-${version}"; - sha256 = "164da20j727p8l7hh37j2r8pai9sj402nhswvg0nrlgj53nr6083"; + sha256 = "1jx6qv7skikl1ap3g1r34rkz4ab756kra7dgwwv45vl2fb6x74k4"; }; patches = [ ./fix-tests.patch ]; - cargoSha256 = "1sv5czhrafk15yj5xyd1x9jdqn1dz6aqpxxnyz49icx53qlg9f8g"; + cargoSha256 = "1li1gmcs7lnjr4qhzs0rrgngdcxy1paiibjwk9zx2rrs71021cgk"; - cargoBuildFlags = [ "-p ripasso-cursive -p ripasso-man" ]; + cargoBuildFlags = [ "-p ripasso-cursive" ]; - nativeBuildInputs = [ pkg-config gpgme python3 ]; + nativeBuildInputs = [ pkg-config gpgme python3 installShellFiles ]; buildInputs = [ ncurses openssl libgpgerror gpgme xorg.libxcb ] ++ lib.optionals stdenv.isDarwin [ AppKit Security ]; - preFixup = '' - mkdir -p "$out/man/man1" - $out/bin/ripasso-man > $out/man/man1/ripasso-cursive.1 - rm $out/bin/ripasso-man + preCheck = '' + export HOME=$TMPDIR + ''; + + postInstall = '' + installManPage target/man-page/cursive/ripasso-cursive.1 ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/tools/security/ripasso/fix-tests.patch b/third_party/nixpkgs/pkgs/tools/security/ripasso/fix-tests.patch index 433ff933b1..85b1714e5c 100644 --- a/third_party/nixpkgs/pkgs/tools/security/ripasso/fix-tests.patch +++ b/third_party/nixpkgs/pkgs/tools/security/ripasso/fix-tests.patch @@ -1,35 +1,82 @@ -diff --git a/src/pass/test.rs b/src/pass/test.rs -index c980a2f..2e6c8cc 100644 --- a/src/pass/test.rs -+++ b/src/pass/test.rs -@@ -56,6 +56,7 @@ fn populate_password_list_small_repo() { ++++ a/src/pass/test.rs +@@ -83,6 +83,7 @@ base_path.pop(); base_path.pop(); base_path.pop(); + base_path.pop(); base_path.push("testres"); - let mut password_dir: PathBuf = base_path.clone(); -@@ -84,6 +85,7 @@ fn populate_password_list_repo_with_deleted_files() { + let home: PathBuf = base_path.clone(); +@@ -114,6 +115,7 @@ base_path.pop(); base_path.pop(); base_path.pop(); + base_path.pop(); base_path.push("testres"); - let mut password_dir: PathBuf = base_path.clone(); -@@ -112,6 +114,7 @@ fn populate_password_list_directory_without_git() { + let home: PathBuf = base_path.clone(); +@@ -144,6 +146,7 @@ base_path.pop(); base_path.pop(); base_path.pop(); + base_path.pop(); base_path.push("testres"); - let mut password_dir: PathBuf = base_path.clone(); -@@ -149,4 +152,4 @@ fn parse_signing_keys_empty() { - let result = PasswordStore::parse_signing_keys(&None).unwrap(); + let home: PathBuf = base_path.clone(); +@@ -185,6 +188,7 @@ + base_path.pop(); + base_path.pop(); + base_path.pop(); ++ base_path.pop(); + base_path.push("testres"); + + let home: PathBuf = base_path.clone(); +@@ -220,6 +224,7 @@ + base_path.pop(); + base_path.pop(); + base_path.pop(); ++ base_path.pop(); + base_path.push("testres"); + + let home: PathBuf = base_path.clone(); +@@ -267,6 +272,7 @@ + base_path.pop(); + base_path.pop(); + base_path.pop(); ++ base_path.pop(); + base_path.push("testres"); + + let home: PathBuf = base_path.clone(); +@@ -298,6 +304,7 @@ + base_path.pop(); + base_path.pop(); + base_path.pop(); ++ base_path.pop(); + base_path.push("testres"); + + let home: PathBuf = base_path.clone(); +@@ -337,6 +344,7 @@ + base_path.pop(); + base_path.pop(); + base_path.pop(); ++ base_path.pop(); + base_path.push("testres"); + + let home: PathBuf = base_path.clone(); +@@ -828,6 +836,7 @@ + base_path.pop(); + base_path.pop(); + base_path.pop(); ++ base_path.pop(); + base_path.push("testres"); + + let home: PathBuf = base_path.clone(); +@@ -860,6 +869,7 @@ + base_path.pop(); + base_path.pop(); + base_path.pop(); ++ base_path.pop(); + base_path.pop(); + base_path.push("testres"); - assert_eq!(result.len(), 0); --} -\ No newline at end of file -+} diff --git a/third_party/nixpkgs/pkgs/tools/security/rnp/default.nix b/third_party/nixpkgs/pkgs/tools/security/rnp/default.nix new file mode 100644 index 0000000000..3c60190f12 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/security/rnp/default.nix @@ -0,0 +1,56 @@ +{ lib +, stdenv +, asciidoctor +, botan2 +, bzip2 +, cmake +, fetchFromGitHub +, gnupg +, gtest +, json_c +, pkg-config +, python3 +, zlib +}: + +stdenv.mkDerivation rec { + pname = "rnp"; + version = "0.15.1"; + + src = fetchFromGitHub { + owner = "rnpgp"; + repo = "rnp"; + rev = "v${version}"; + sha256 = "1l7y99rcss5w24lil6nqwr0dzh2jvq0qxmdvq7j5yx3fdssd5xsv"; + }; + + buildInputs = [ zlib bzip2 json_c botan2 ]; + + cmakeFlags = [ + "-DCMAKE_INSTALL_PREFIX=${placeholder "out"}" + "-DBUILD_SHARED_LIBS=on" + "-DBUILD_TESTING=on" + "-DDOWNLOAD_GTEST=off" + "-DDOWNLOAD_RUBYRNP=off" + ]; + + nativeBuildInputs = [ asciidoctor cmake gnupg gtest pkg-config python3 ]; + + # NOTE: check-only inputs should ideally be moved to checkInputs, but it + # would fail during buildPhase. + # checkInputs = [ gtest python3 ]; + + outputs = [ "out" "lib" "dev" ]; + + preConfigure = '' + echo "v${version}" > version.txt + ''; + + meta = with lib; { + homepage = "https://github.com/rnpgp/rnp"; + description = "High performance C++ OpenPGP library, fully compliant to RFC 4880"; + license = licenses.bsd2; + platforms = platforms.all; + maintainers = with maintainers; [ ribose-jeffreylau ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/security/secp256k1/default.nix b/third_party/nixpkgs/pkgs/tools/security/secp256k1/default.nix index a8acf3586c..e88187f846 100644 --- a/third_party/nixpkgs/pkgs/tools/security/secp256k1/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/secp256k1/default.nix @@ -1,45 +1,37 @@ -{ lib, stdenv, fetchFromGitHub, autoreconfHook, jdk - -# Enable ECDSA pubkey recovery module -, enableRecovery ? true - -# Enable ECDH shared secret computation (disabled by default because it is -# experimental) -, enableECDH ? false - -# Enable libsecp256k1_jni (disabled by default because it requires a jdk, -# which is a large dependency) -, enableJNI ? false - +{ lib +, stdenv +, fetchFromGitHub +, autoreconfHook }: -let inherit (lib) optionals; in - stdenv.mkDerivation { pname = "secp256k1"; # I can't find any version numbers, so we're just using the date of the # last commit. - version = "2020-08-16"; + version = "unstable-2021-06-06"; src = fetchFromGitHub { owner = "bitcoin-core"; repo = "secp256k1"; - rev = "670cdd3f8be25f81472b2d16dcd228b0d24a5c45"; - sha256 = "0ak2hrr0wznl5d9s905qwn5yds7k22i28d2jp957l4a8yf8cqv3s"; + rev = "7973576f6e3ab27d036a09397152b124d747f4ae"; + sha256 = "0vjk55dv0mkph4k6bqgkykmxn05ngzvhc4rzjnvn33xzi8dzlvah"; }; - buildInputs = optionals enableJNI [ jdk ]; - nativeBuildInputs = [ autoreconfHook ]; - configureFlags = - [ "--enable-benchmark=no" "--enable-tests=yes" "--enable-exhaustive-tests=no" ] ++ - optionals enableECDH [ "--enable-module-ecdh" "--enable-experimental" ] ++ - optionals enableRecovery [ "--enable-module-recovery" ] ++ - optionals enableJNI [ "--enable-jni" ]; + configureFlags = [ + "--enable-benchmark=no" + "--enable-exhaustive-tests=no" + "--enable-experimental" + "--enable-module-ecdh" + "--enable-module-recovery" + "--enable-module-schnorrsig" + "--enable-tests=yes" + ]; doCheck = true; + checkPhase = "./tests"; meta = with lib; { @@ -51,7 +43,7 @@ stdenv.mkDerivation { ''; homepage = "https://github.com/bitcoin-core/secp256k1"; license = with licenses; [ mit ]; - maintainers = with maintainers; [ chris-martin ]; + maintainers = with maintainers; [ ]; platforms = with platforms; unix; }; } diff --git a/third_party/nixpkgs/pkgs/tools/security/snallygaster/default.nix b/third_party/nixpkgs/pkgs/tools/security/snallygaster/default.nix index 36ea37edbb..e77743d864 100644 --- a/third_party/nixpkgs/pkgs/tools/security/snallygaster/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/snallygaster/default.nix @@ -5,13 +5,13 @@ python3Packages.buildPythonApplication rec { pname = "snallygaster"; - version = "0.0.9"; + version = "0.0.10"; src = fetchFromGitHub { owner = "hannob"; repo = pname; rev = "v${version}"; - sha256 = "1gan5asgrxdgfi9lalhxzj3vs7nkazi8nqia36bpz1qb5fz7jrx3"; + sha256 = "1xd483sl94zhs7yhc52s0zrn3pj7vf5izggp4ap1d2j0lbwwcyka"; }; propagatedBuildInputs = with python3Packages; [ diff --git a/third_party/nixpkgs/pkgs/tools/security/sshguard/default.nix b/third_party/nixpkgs/pkgs/tools/security/sshguard/default.nix index f42a1ec96f..a45a57eff0 100644 --- a/third_party/nixpkgs/pkgs/tools/security/sshguard/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/sshguard/default.nix @@ -1,12 +1,12 @@ { lib, stdenv, fetchurl, autoreconfHook, bison, flex}: stdenv.mkDerivation rec { - version = "2.4.1"; + version = "2.4.2"; pname = "sshguard"; src = fetchurl { url = "mirror://sourceforge/sshguard/${pname}-${version}.tar.gz"; - sha256 = "0rrwmx91ifvc61wkld8gjkmfsq0ixxmf7m8fg4addkkxwvk04pc7"; + sha256 = "1s1prqdbxjrd1n3j4x8ggy9gl2j0ax6xhkzcvyzajw7awmvbfw17"; }; doCheck = true; diff --git a/third_party/nixpkgs/pkgs/tools/security/theharvester/default.nix b/third_party/nixpkgs/pkgs/tools/security/theharvester/default.nix index 02e83296c6..2fae6c465d 100644 --- a/third_party/nixpkgs/pkgs/tools/security/theharvester/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/theharvester/default.nix @@ -22,7 +22,7 @@ python3.pkgs.buildPythonApplication rec { beautifulsoup4 censys certifi - dns + dnspython gevent grequests lxml diff --git a/third_party/nixpkgs/pkgs/tools/security/truecrack/default.nix b/third_party/nixpkgs/pkgs/tools/security/truecrack/default.nix new file mode 100644 index 0000000000..cf64b234c6 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/security/truecrack/default.nix @@ -0,0 +1,40 @@ +{ lib, gccStdenv, fetchFromGitLab, cudatoolkit +, cudaSupport ? false +, pkg-config }: + +gccStdenv.mkDerivation rec { + pname = "truecrack"; + version = "3.6"; + + src = fetchFromGitLab { + owner = "kalilinux"; + repo = "packages/truecrack"; + rev = "debian/${version}+git20150326-0kali1"; + sha256 = "+Rw9SfaQtO1AJO6UVVDMCo8DT0dYEbv7zX8SI+pHCRQ="; + }; + + configureFlags = (if cudaSupport then [ + "--with-cuda=${cudatoolkit}" + ] else [ + "--enable-cpu" + ]); + + nativeBuildInputs = [ + pkg-config + ]; + + buildInputs = lib.optionals cudaSupport [ + cudatoolkit + ]; + + installFlags = [ "prefix=$(out)" ]; + enableParallelBuilding = true; + + meta = with lib; { + description = "TrueCrack is a brute-force password cracker for TrueCrypt volumes. It works on Linux and it is optimized for Nvidia Cuda technology."; + homepage = "https://gitlab.com/kalilinux/packages/truecrack"; + license = licenses.gpl3Plus; + platforms = platforms.unix; + maintainers = with maintainers; [ ethancedwards8 ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/security/vault/default.nix b/third_party/nixpkgs/pkgs/tools/security/vault/default.nix index eb5ac31d30..45bd76b909 100644 --- a/third_party/nixpkgs/pkgs/tools/security/vault/default.nix +++ b/third_party/nixpkgs/pkgs/tools/security/vault/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { pname = "vault"; - version = "1.7.2"; + version = "1.7.3"; src = fetchFromGitHub { owner = "hashicorp"; repo = "vault"; rev = "v${version}"; - sha256 = "0nd77lfccl71qn98cq1yz85aiafplxbr58nafbbflijs1fz1771q"; + sha256 = "sha256-BO4xzZrX9eVETQWjBDBfP7TlD7sO+gLgbB330A11KAI="; }; goPackagePath = "github.com/hashicorp/vault"; diff --git a/third_party/nixpkgs/pkgs/tools/security/vault/vault-bin.nix b/third_party/nixpkgs/pkgs/tools/security/vault/vault-bin.nix index b283a40888..11175c3c88 100644 --- a/third_party/nixpkgs/pkgs/tools/security/vault/vault-bin.nix +++ b/third_party/nixpkgs/pkgs/tools/security/vault/vault-bin.nix @@ -1,26 +1,26 @@ { lib, stdenv, fetchurl, unzip }: let - version = "1.7.2"; + version = "1.7.3"; sources = let base = "https://releases.hashicorp.com/vault/${version}"; in { x86_64-linux = fetchurl { url = "${base}/vault_${version}_linux_amd64.zip"; - sha256 = "1g37pgj7hbi6vfpwq9rrh6is980lfwbq5jb4736jfp5m360vprjy"; + sha256 = "sha256-hFMTKpO3VcCondSy8amb1K8G+BZ7gZF/EXCAg5Ax4D8="; }; i686-linux = fetchurl { url = "${base}/vault_${version}_linux_386.zip"; - sha256 = "0777xkkfiy0s3nyygcfpw0nbfsm6yz1n5hxcvfafhzcdyr58fpb7"; + sha256 = "02wbbzffb2m7y3476l5qa5dhi0v30f3sfif0svqhhzh927kg4s5w"; }; x86_64-darwin = fetchurl { url = "${base}/vault_${version}_darwin_amd64.zip"; - sha256 = "0wzmah542bhyvrm9brhrx7drjyzan8vxhqnm0gjak5wlrcnf2dvx"; + sha256 = "0sw56dhjbasdnlwg668swhyxrn5gy7h9gysdg96za4dhq3iimkrn"; }; aarch64-linux = fetchurl { url = "${base}/vault_${version}_linux_arm64.zip"; - sha256 = "0cs56ircad2z2msqgb0l5h53cwmwybi5rs4y2jigz4rq4ndx9f9b"; + sha256 = "0c2w0684adaqildwviajp6pi8vp76g4zwwgc1k2bb5mwv1h2y293"; }; }; diff --git a/third_party/nixpkgs/pkgs/tools/system/auto-cpufreq/default.nix b/third_party/nixpkgs/pkgs/tools/system/auto-cpufreq/default.nix index f86ac47fdd..28d771f07b 100644 --- a/third_party/nixpkgs/pkgs/tools/system/auto-cpufreq/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/auto-cpufreq/default.nix @@ -2,13 +2,13 @@ python3Packages.buildPythonPackage rec { pname = "auto-cpufreq"; - version = "1.6.1"; + version = "1.6.4"; src = fetchFromGitHub { owner = "AdnanHodzic"; repo = pname; rev = "v${version}"; - sha256 = "sha256-oz3C1150CPfT0kkx1x7VIX/Rm06dkjyxeDPFCRJaWNc="; + sha256 = "sha256-9WYuAWcJGosYEsnnkqvZLXXvqF+1nBEozh6F84Kit6w="; }; propagatedBuildInputs = with python3Packages; [ click distro psutil ]; diff --git a/third_party/nixpkgs/pkgs/tools/system/auto-cpufreq/prevent-install-and-copy.patch b/third_party/nixpkgs/pkgs/tools/system/auto-cpufreq/prevent-install-and-copy.patch index 7f86f6eda0..41bd3dc591 100644 --- a/third_party/nixpkgs/pkgs/tools/system/auto-cpufreq/prevent-install-and-copy.patch +++ b/third_party/nixpkgs/pkgs/tools/system/auto-cpufreq/prevent-install-and-copy.patch @@ -1,18 +1,9 @@ diff --git a/auto_cpufreq/core.py b/auto_cpufreq/core.py -index a685db8..1ca1ca1 100644 +index 83d0d64..04b5035 100644 --- a/auto_cpufreq/core.py +++ b/auto_cpufreq/core.py -@@ -72,7 +72,7 @@ def app_version(): - print("Git commit:", check_output(["git", "describe", "--always"]).strip().decode()) - else: - print(getoutput("pacman -Qi auto-cpufreq | grep Version")) -- else: -+ else: - # source code (auto-cpufreq-installer) - try: - print("Git commit:", check_output(["git", "describe", "--always"]).strip().decode()) -@@ -179,31 +179,13 @@ def get_current_gov(): - return print("Currently using:", getoutput("cpufreqctl.auto-cpufreq --governor").strip().split(" ")[0], "governor") +@@ -204,35 +204,13 @@ def get_current_gov(): + def cpufreqctl(): - """ @@ -20,14 +11,18 @@ index a685db8..1ca1ca1 100644 - """ - - # detect if running on a SNAP -- if os.getenv('PKG_MARKER') == "SNAP": +- if os.getenv("PKG_MARKER") == "SNAP": - pass - else: - # deploy cpufreqctl.auto-cpufreq script - if os.path.isfile("/usr/bin/cpufreqctl"): -- shutil.copy(SCRIPTS_DIR / "cpufreqctl.sh", "/usr/bin/cpufreqctl.auto-cpufreq") +- shutil.copy( +- SCRIPTS_DIR / "cpufreqctl.sh", "/usr/bin/cpufreqctl.auto-cpufreq" +- ) - else: -- shutil.copy(SCRIPTS_DIR / "cpufreqctl.sh", "/usr/bin/cpufreqctl.auto-cpufreq") +- shutil.copy( +- SCRIPTS_DIR / "cpufreqctl.sh", "/usr/bin/cpufreqctl.auto-cpufreq" +- ) + # scripts are already in the correct place + pass @@ -37,7 +32,7 @@ index a685db8..1ca1ca1 100644 - remove cpufreqctl.auto-cpufreq script - """ - # detect if running on a SNAP -- if os.getenv('PKG_MARKER') == "SNAP": +- if os.getenv("PKG_MARKER") == "SNAP": - pass - else: - if os.path.isfile("/usr/bin/cpufreqctl.auto-cpufreq"): @@ -45,10 +40,10 @@ index a685db8..1ca1ca1 100644 + # no need to restore + pass + def footer(l=79): - print("\n" + "-" * l + "\n") -@@ -233,74 +215,12 @@ def remove_complete_msg(): - footer() +@@ -276,76 +254,13 @@ def remove_complete_msg(): + def deploy_daemon(): - print("\n" + "-" * 21 + " Deploying auto-cpufreq as a daemon " + "-" * 22 + "\n") @@ -66,22 +61,24 @@ index a685db8..1ca1ca1 100644 - f.seek(0) - f.truncate() - f.write(content.replace(orig_set, change_set)) -- except: -- print("\nERROR:\nWas unable to turn off bluetooth on boot") +- except Exception as e: +- print(f"\nERROR:\nWas unable to turn off bluetooth on boot\n{repr(e)}") - - auto_cpufreq_stats_path.touch(exist_ok=True) - - print("\n* Deploy auto-cpufreq install script") -- shutil.copy(SCRIPTS_DIR / "auto-cpufreq-install.sh", "/usr/bin/auto-cpufreq-install") +- shutil.copy( +- SCRIPTS_DIR / "auto-cpufreq-install.sh", "/usr/bin/auto-cpufreq-install" +- ) - - print("\n* Deploy auto-cpufreq remove script") - shutil.copy(SCRIPTS_DIR / "auto-cpufreq-remove.sh", "/usr/bin/auto-cpufreq-remove") - - call("/usr/bin/auto-cpufreq-install", shell=True) -- + # prevent needless copying and system changes + pass + # remove auto-cpufreq daemon def remove(): - @@ -102,8 +99,8 @@ index a685db8..1ca1ca1 100644 - f.seek(0) - f.truncate() - f.write(content.replace(change_set, orig_set)) -- except: -- print("\nERROR:\nWas unable to turn on bluetooth on boot") +- except Exception as e: +- print(f"\nERROR:\nWas unable to turn on bluetooth on boot\n{repr(e)}") - - # run auto-cpufreq daemon install script - call("/usr/bin/auto-cpufreq-remove", shell=True) @@ -125,15 +122,6 @@ index a685db8..1ca1ca1 100644 def gov_check(): for gov in get_avail_gov(): -@@ -331,7 +251,7 @@ def countdown(s): - if auto_cpufreq_stats_file is not None: - auto_cpufreq_stats_file.seek(0) - auto_cpufreq_stats_file.truncate(0) -- -+ - # execution timestamp - from datetime import datetime - now = datetime.now() diff --git a/scripts/cpufreqctl.sh b/scripts/cpufreqctl.sh index 63a2b5b..e157efe 100755 --- a/scripts/cpufreqctl.sh diff --git a/third_party/nixpkgs/pkgs/tools/system/bfs/default.nix b/third_party/nixpkgs/pkgs/tools/system/bfs/default.nix index 8ee30317be..4b1bcec96a 100644 --- a/third_party/nixpkgs/pkgs/tools/system/bfs/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/bfs/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "bfs"; - version = "2.2"; + version = "2.2.1"; src = fetchFromGitHub { repo = "bfs"; owner = "tavianator"; rev = version; - sha256 = "sha256-YxQBKXjYITVy8c6DJ3GwDR0ESgzghqJCcj1GEv8Lp2Q="; + sha256 = "sha256-3E1EXtI8QvHRDoVSV21K1/Rknp3E+GV1n5iorrv5jNY="; }; buildInputs = lib.optionals stdenv.isLinux [ libcap acl ]; diff --git a/third_party/nixpkgs/pkgs/tools/system/bottom/default.nix b/third_party/nixpkgs/pkgs/tools/system/bottom/default.nix index 26dc89d935..036410f350 100644 --- a/third_party/nixpkgs/pkgs/tools/system/bottom/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/bottom/default.nix @@ -11,13 +11,13 @@ rustPlatform.buildRustPackage rec { pname = "bottom"; - version = "0.6.1"; + version = "0.6.2"; src = fetchFromGitHub { owner = "ClementTsang"; repo = pname; rev = version; - sha256 = "sha256-/O/VXBpVBgjzYuv1AghzmOBUu0MQXhuF65QswgNwa0k="; + sha256 = "sha256-QCi6Oi5xk88ev2B4rlXwgR55qKZSUbIY/96t/jhJQ0Q="; }; prePatch = '' @@ -33,7 +33,7 @@ rustPlatform.buildRustPackage rec { libiconv ]; - cargoSha256 = "sha256-5AZgOzRg7jEyv/4+IiQplrwt2yQO9yNi6BosdSzh5v8="; + cargoSha256 = "sha256-RJ7xIp9EBiBLSMAchr7XYhrTITNJy+Yfok//vZr3Z38="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/tools/system/bpytop/default.nix b/third_party/nixpkgs/pkgs/tools/system/bpytop/default.nix index 9820e6ac00..f552ede91b 100644 --- a/third_party/nixpkgs/pkgs/tools/system/bpytop/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/bpytop/default.nix @@ -7,13 +7,13 @@ stdenv.mkDerivation rec { pname = "bpytop"; - version = "1.0.66"; + version = "1.0.67"; src = fetchFromGitHub { owner = "aristocratos"; repo = pname; rev = "v${version}"; - sha256 = "sha256-gggsZHKbEt4VSMNTkKGFLcPPt2uHRFDCkqyHYx0c9Y0="; + sha256 = "sha256-nvpIqX16WP9kslFo1ne5+QAZcvG+WFm5kDVOLN4C+b0="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/third_party/nixpkgs/pkgs/tools/system/cm-rgb/default.nix b/third_party/nixpkgs/pkgs/tools/system/cm-rgb/default.nix index 47fdba50c5..3a6c7c6e57 100644 --- a/third_party/nixpkgs/pkgs/tools/system/cm-rgb/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/cm-rgb/default.nix @@ -12,13 +12,13 @@ buildPythonApplication rec { pname = "cm-rgb"; - version = "0.3.4"; + version = "0.3.6"; src = fetchFromGitHub { owner = "gfduszynski"; repo = pname; rev = "v${version}"; - sha256 = "04brldaa2zpvzkcg43i5hpbj03d1nqrgiplm5nh4shn12cif19ag"; + sha256 = "sha256-m0ZAjSLRzcjzygLEbvCiDd7krc1gRqTg1ZV4H/o2c68="; }; nativeBuildInputs = [ @@ -37,10 +37,6 @@ buildPythonApplication rec { ]; postInstall = '' - # Remove this line when/if this PR gets merged: - # https://github.com/gfduszynski/cm-rgb/pull/43 - install -m0755 scripts/cm-rgb-gui $out/bin/cm-rgb-gui - mkdir -p $out/etc/udev/rules.d echo 'SUBSYSTEM=="usb", ATTR{idVendor}=="2516", ATTR{idProduct}=="0051", TAG+="uaccess"' \ > $out/etc/udev/rules.d/60-cm-rgb.rules @@ -51,7 +47,7 @@ buildPythonApplication rec { longDescription = '' cm-rgb controls AMD Wraith Prism RGB LEDS. - To permit non-root accounts to change use this utility on + To permit non-root accounts to use this utility on NixOS, add this package to services.udev.packages in configuration.nix. ''; diff --git a/third_party/nixpkgs/pkgs/tools/system/consul-template/default.nix b/third_party/nixpkgs/pkgs/tools/system/consul-template/default.nix index c04b696758..5326f8722d 100644 --- a/third_party/nixpkgs/pkgs/tools/system/consul-template/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/consul-template/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "consul-template"; - version = "0.25.2"; + version = "0.26.0"; src = fetchFromGitHub { owner = "hashicorp"; repo = "consul-template"; rev = "v${version}"; - sha256 = "sha256-r9/CxXFaeod48NgOFWhl+axiNqjaU+RIEHI71fmYzP8="; + sha256 = "sha256-upVCztpfT+SuuB343GEnT4KSnWul10/cItKJvUqJYo4="; }; - vendorSha256 = "sha256-DLjaDj3fJYl5ICxJuaCLKdd/AfwfUIM8teJLs3a2MHo="; + vendorSha256 = "sha256-IAWuqg8zZ9/ny3ZijxGgHAJDICV09NTGxPvLLP4oLzw="; # consul-template tests depend on vault and consul services running to # execute tests so we skip them here diff --git a/third_party/nixpkgs/pkgs/tools/system/ctop/default.nix b/third_party/nixpkgs/pkgs/tools/system/ctop/default.nix index 2b538d6632..45cbca172f 100644 --- a/third_party/nixpkgs/pkgs/tools/system/ctop/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/ctop/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "ctop"; - version = "0.7.5"; + version = "0.7.6"; src = fetchFromGitHub { owner = "bcicen"; repo = pname; - rev = "v${version}"; - sha256 = "0mm1gapnz67mwc346jr530xwpiajq1b2f295s8gz5nrb2a23mqln"; + rev = version; + sha256 = "sha256-ceRyYrqmgdTnV8m9LkLlR6iTrC5F81X/V3fWI2CiKBw="; }; - vendorSha256 = "0a5rwnf251jbp7jz2ln8z9hqp0112c6kx0y09nncvlcki35qq9sh"; + vendorSha256 = "sha256-UCeMy4iT0c2sTcCDPg0TIYCLYfrIUvHluUuGIpzluSg="; doCheck = false; @@ -21,6 +21,6 @@ buildGoModule rec { description = "Top-like interface for container metrics"; homepage = "https://ctop.sh/"; license = licenses.mit; - maintainers = with maintainers; [ apeyroux marsam ]; + maintainers = with maintainers; [ apeyroux marsam SuperSandro2000 ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/system/fancy-motd/default.nix b/third_party/nixpkgs/pkgs/tools/system/fancy-motd/default.nix index 982dbcd2f5..a009fe1423 100644 --- a/third_party/nixpkgs/pkgs/tools/system/fancy-motd/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/fancy-motd/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "fancy-motd"; - version = "unstable-2021-05-15"; + version = "unstable-2021-06-27"; src = fetchFromGitHub { owner = "bcyran"; repo = pname; - rev = "b25c1e7d76927d7f947a048d844dad4400de3598"; - sha256 = "05jazmijk3im1wl4nprkwmrq6bxhb3ah8syyqym109blajy72841"; + rev = "839320ab261612c9ba5b13fc8d1445d094ea0ab3"; + sha256 = "00wv7nk2f3q186z2qfks5salf97s04vk7ilk8jnbimxg4fl7hcda"; }; buildInputs = [ bc curl figlet fortune gawk iproute2 ]; diff --git a/third_party/nixpkgs/pkgs/tools/system/fio/default.nix b/third_party/nixpkgs/pkgs/tools/system/fio/default.nix index fc4ea8d6b3..b108c9dd3d 100644 --- a/third_party/nixpkgs/pkgs/tools/system/fio/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/fio/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "fio"; - version = "3.26"; + version = "3.27"; src = fetchFromGitHub { owner = "axboe"; repo = "fio"; rev = "fio-${version}"; - sha256 = "sha256-/Si0McndJ6Xp3ifDr+BStv89LmZyAgof95QkHGT8MGQ="; + sha256 = "sha256-/VzqmDbCTOOwFBMDj9nYuAW7ZJNM8B2LQ3QxReWG+iw="; }; buildInputs = [ python3 zlib ] diff --git a/third_party/nixpkgs/pkgs/tools/system/gdu/default.nix b/third_party/nixpkgs/pkgs/tools/system/gdu/default.nix index 629085d346..5a84cd6ee3 100644 --- a/third_party/nixpkgs/pkgs/tools/system/gdu/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/gdu/default.nix @@ -7,16 +7,16 @@ buildGoModule rec { pname = "gdu"; - version = "5.0.1"; + version = "5.1.1"; src = fetchFromGitHub { owner = "dundee"; repo = pname; rev = "v${version}"; - sha256 = "sha256-78eQinKR4w7K8MFd4uyj5IPkUs0Mz5XeO7JUG/1cKLw="; + sha256 = "sha256-9o/njurf1AWt04A8u38FMFcteLZlRHDejbH9+ekDjKI="; }; - vendorSha256 = "sha256-9upXhTvQJ9oFfomgqja3SiifiZpl8RUQ85HwL9bDPlQ="; + vendorSha256 = "sha256-9W1K01PJ+tRLSJ0L7NGHXT5w5oHmlBkT8kwnOLOzSCc="; nativeBuildInputs = [ installShellFiles ]; @@ -35,7 +35,7 @@ buildGoModule rec { installManPage gdu.1 ''; - doCheck = !(stdenv.isAarch64 || stdenv.isDarwin); + doCheck = !stdenv.isDarwin; meta = with lib; { description = "Disk usage analyzer with console interface"; diff --git a/third_party/nixpkgs/pkgs/tools/system/gptfdisk/default.nix b/third_party/nixpkgs/pkgs/tools/system/gptfdisk/default.nix index bf6589eb66..0e7aff32bf 100644 --- a/third_party/nixpkgs/pkgs/tools/system/gptfdisk/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/gptfdisk/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "gptfdisk"; - version = "1.0.7"; + version = "1.0.8"; src = fetchurl { # https://www.rodsbooks.com/gdisk/${name}.tar.gz also works, but the home # page clearly implies a preference for using SourceForge's bandwidth: url = "mirror://sourceforge/gptfdisk/${pname}-${version}.tar.gz"; - sha256 = "sha256-dUAEt/hbJ5KHx6w8BGmx1+Dq4EOpei5YewVgyl84KMA="; + sha256 = "sha256-ldGYVvAE2rxLjDQrJhLo0KnuvdUgBClxiDafFS6dxt8="; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/tools/system/netdata/default.nix b/third_party/nixpkgs/pkgs/tools/system/netdata/default.nix index e00c2bfafb..673d29d61a 100644 --- a/third_party/nixpkgs/pkgs/tools/system/netdata/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/netdata/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, callPackage, fetchFromGitHub, autoreconfHook, pkg-config +{ lib, stdenv, callPackage, fetchFromGitHub, autoreconfHook, pkg-config, makeWrapper , CoreFoundation, IOKit, libossp_uuid , nixosTests , curl, libcap, libuuid, lm_sensors, zlib @@ -27,7 +27,7 @@ in stdenv.mkDerivation rec { fetchSubmodules = true; }; - nativeBuildInputs = [ autoreconfHook pkg-config ]; + nativeBuildInputs = [ autoreconfHook pkg-config makeWrapper ]; buildInputs = [ curl.dev zlib.dev ] ++ optionals stdenv.isDarwin [ CoreFoundation IOKit libossp_uuid ] ++ optionals (!stdenv.isDarwin) [ libcap.dev libuuid.dev ] @@ -79,7 +79,7 @@ in stdenv.mkDerivation rec { ]; postFixup = '' - rm -r $out/sbin + wrapProgram $out/bin/netdata-claim.sh --prefix PATH : ${lib.makeBinPath [ openssl ]} ''; passthru.tests.netdata = nixosTests.netdata; diff --git a/third_party/nixpkgs/pkgs/tools/system/plan9port/darwin-cfframework.patch b/third_party/nixpkgs/pkgs/tools/system/plan9port/darwin-cfframework.patch deleted file mode 100644 index 01541af92e..0000000000 --- a/third_party/nixpkgs/pkgs/tools/system/plan9port/darwin-cfframework.patch +++ /dev/null @@ -1,24 +0,0 @@ -From d1f0bd3de7d3d54523aeefd9731ea850d20eaab4 Mon Sep 17 00:00:00 2001 -From: Jason Felice -Date: Tue, 2 Jul 2019 13:19:23 -0400 -Subject: [PATCH] Need CoreFoundation - ---- - src/cmd/devdraw/cocoa-screen.m | 1 + - 1 file changed, 1 insertion(+) - -diff --git a/src/cmd/devdraw/cocoa-screen.m b/src/cmd/devdraw/cocoa-screen.m -index 97128da2..0e380dd3 100644 ---- a/src/cmd/devdraw/cocoa-screen.m -+++ b/src/cmd/devdraw/cocoa-screen.m -@@ -56,6 +56,7 @@ - #endif - - AUTOFRAMEWORK(Cocoa) -+AUTOFRAMEWORK(CoreFoundation) - - #define LOG if(0)NSLog - #define panic sysfatal --- -2.21.0 - diff --git a/third_party/nixpkgs/pkgs/tools/system/plan9port/darwin-sw_vers.patch b/third_party/nixpkgs/pkgs/tools/system/plan9port/darwin-sw_vers.patch deleted file mode 100644 index 3e61c83e54..0000000000 --- a/third_party/nixpkgs/pkgs/tools/system/plan9port/darwin-sw_vers.patch +++ /dev/null @@ -1,47 +0,0 @@ -From d21d082275f04f88eabcc8ecdb03ee932c71ebf1 Mon Sep 17 00:00:00 2001 -From: Jason Felice -Date: Mon, 1 Jul 2019 15:23:19 -0400 -Subject: [PATCH 2/3] Build for 10.12 - ---- - bin/osxvers | 3 +-- - src/cmd/devdraw/mkwsysrules.sh | 4 ++-- - 2 files changed, 3 insertions(+), 4 deletions(-) - -diff --git a/bin/osxvers b/bin/osxvers -index 4af44da2..3be7e6e9 100755 ---- a/bin/osxvers -+++ b/bin/osxvers -@@ -2,6 +2,5 @@ - - u=`uname` - case "$u" in --Darwin) -- sw_vers | awk '$1 == "ProductVersion:" {print $2}' | awk -F. '{printf("CFLAGS=$CFLAGS -DOSX_VERSION=%d%02d%02d\n", $1, $2, $3)}' -+Darwin) printf 'CFLAGS=$CFLAGS -DOSX_VERSION=101200\n';; - esac -diff --git a/src/cmd/devdraw/mkwsysrules.sh b/src/cmd/devdraw/mkwsysrules.sh -index e94afbd3..40e632db 100644 ---- a/src/cmd/devdraw/mkwsysrules.sh -+++ b/src/cmd/devdraw/mkwsysrules.sh -@@ -22,7 +22,7 @@ fi - - if [ "x$WSYSTYPE" = "x" ]; then - if [ "x`uname`" = "xDarwin" ]; then -- if sw_vers | grep 'ProductVersion: 10\.[0-5]\.' >/dev/null; then -+ if false; then - echo 1>&2 'OS X 10.5 and older are not supported' - exit 1 - else -@@ -54,7 +54,7 @@ if [ $WSYSTYPE = x11 ]; then - XO=`ls x11-*.c 2>/dev/null | sed 's/\.c$/.o/'` - echo 'WSYSOFILES=$WSYSOFILES '$XO - elif [ $WSYSTYPE = osx-cocoa ]; then -- if sw_vers|awk '/ProductVersion/{split($2,a,".");exit(a[2]<14)}' >/dev/null; then # 0 is true in sh. -+ if false; then - echo 'OBJCFLAGS=$OBJCFLAGS -fobjc-arc' - echo 'WSYSOFILES=$WSYSOFILES osx-draw.o cocoa-screen-metal-objc.o cocoa-srv.o cocoa-thread.o' - else --- -2.21.0 - diff --git a/third_party/nixpkgs/pkgs/tools/system/plan9port/default.nix b/third_party/nixpkgs/pkgs/tools/system/plan9port/default.nix index 2b0df3c893..78db6e2037 100644 --- a/third_party/nixpkgs/pkgs/tools/system/plan9port/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/plan9port/default.nix @@ -11,20 +11,15 @@ stdenv.mkDerivation { pname = "plan9port"; - version = "2020-01-08"; + version = "2021-04-22"; src = fetchFromGitHub { owner = "9fans"; repo = "plan9port"; - rev = "cc3d97d52a72d7eaceb5b636bcdf81c3e19f7a2e"; - sha256 = "0gb55kj0gzx1kdhiwcrbr7xcgz1im21dyxgxhfhh6d0q9rw0c17g"; + rev = "70cc6e5ba7798b315c3fb3aae19620a01604a459"; + hash = "sha256-HCn8R9YSocHrpw/xK5n8gsCLSAbAQgw0NtjO9vYIbKo="; }; - patches = [ - ./darwin-sw_vers.patch - ./darwin-cfframework.patch - ]; - postPatch = '' #hardcoded path substituteInPlace src/cmd/acme/acme.c \ @@ -86,10 +81,16 @@ stdenv.mkDerivation { Plan 9 from User Space (aka plan9port) is a port of many Plan 9 programs from their native Plan 9 environment to Unix-like operating systems. ''; - license = licenses.lpl-102; - maintainers = with maintainers; [ AndersonTorres bbarker - ftrvxmtrx kovirobi ]; + license = licenses.mit; + maintainers = with maintainers; [ + AndersonTorres + bbarker + ehmry + ftrvxmtrx + kovirobi + ]; platforms = platforms.unix; + broken = stdenv.isDarwin; }; } # TODO: investigate the mouse chording support patch diff --git a/third_party/nixpkgs/pkgs/tools/system/s6-rc/default.nix b/third_party/nixpkgs/pkgs/tools/system/s6-rc/default.nix index 20c23e1505..532575d16c 100644 --- a/third_party/nixpkgs/pkgs/tools/system/s6-rc/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/s6-rc/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6-rc"; - version = "0.5.2.1"; - sha256 = "02pszbi440wagx2qp8aqj9mv5wm2qisw9lkq7mbnbnxxw9azlhi8"; + version = "0.5.2.2"; + sha256 = "12bzc483jpd16xmhfsfrib84daj1k3kwy5s5nc18ap60apa1r39a"; description = "A service manager for s6-based systems"; platforms = lib.platforms.linux; diff --git a/third_party/nixpkgs/pkgs/tools/system/s6/default.nix b/third_party/nixpkgs/pkgs/tools/system/s6/default.nix index 16fd1be633..e9d096a7ab 100644 --- a/third_party/nixpkgs/pkgs/tools/system/s6/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/s6/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6"; - version = "2.10.0.2"; - sha256 = "08bcrp7ck1l3wmjyzxi3vgk6j0n2jfymxs4rjjw4if40f3lgqfmj"; + version = "2.10.0.3"; + sha256 = "0mw7blp8dwr09z58m9mrxwmmvvpnjzq9klcf1vgm0hbha4qkf88x"; description = "skarnet.org's small & secure supervision software suite"; diff --git a/third_party/nixpkgs/pkgs/tools/system/taskspooler/default.nix b/third_party/nixpkgs/pkgs/tools/system/taskspooler/default.nix new file mode 100644 index 0000000000..9899a9fb3f --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/system/taskspooler/default.nix @@ -0,0 +1,31 @@ +{ stdenv, lib, fetchurl, makeWrapper, coreutils }: + +stdenv.mkDerivation rec { + pname = "taskspooler"; + version = "1.0.1"; + + src = fetchurl { + url = "https://vicerveza.homeunix.net/%7Eviric/wsgi-bin/hgweb.wsgi/ts/archive/7cf9a8bda6d3.tar.gz"; + sha256 = "11i21s8sdmjl4gy5f3dyfsxsmg1japgs4r5ym0b3jdyp99xhpbl1"; + }; + + nativeBuildInputs = [ makeWrapper ]; + + postPatch = '' + substituteInPlace Makefile \ + --replace "PREFIX?=/usr/local" "PREFIX=$out" + ''; + + postFixup = '' + wrapProgram $out/bin/ts \ + --set-default TS_SLOTS "$(${coreutils}/bin/nproc --all)" + ''; + + meta = with lib; { + description = "Simple single node task scheduler"; + license = licenses.gpl2Plus; + homepage = "https://vicerveza.homeunix.net/~viric/wsgi-bin/hgweb.wsgi/ts"; + platforms = platforms.unix; + maintainers = [ maintainers.sheepforce ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/system/thinkfan/default.nix b/third_party/nixpkgs/pkgs/tools/system/thinkfan/default.nix index 97c61d2da0..a53ef4ae9f 100644 --- a/third_party/nixpkgs/pkgs/tools/system/thinkfan/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/thinkfan/default.nix @@ -11,13 +11,13 @@ stdenv.mkDerivation rec { pname = "thinkfan"; - version = "1.2.1"; + version = "1.2.2"; src = fetchFromGitHub { owner = "vmatare"; repo = "thinkfan"; rev = version; - sha256 = "18vgm5w5pjnpipa34j4x87q10695w2jnqwvc2f027afy7mnzw7kz"; + sha256 = "01l1pnj1cgy3dwgyys2s5iqzyv6kk47vlpy09qjafk8py21ijik3"; }; postPatch = '' diff --git a/third_party/nixpkgs/pkgs/tools/system/zenith/default.nix b/third_party/nixpkgs/pkgs/tools/system/zenith/default.nix index 8fc9637bfb..1e36614c42 100644 --- a/third_party/nixpkgs/pkgs/tools/system/zenith/default.nix +++ b/third_party/nixpkgs/pkgs/tools/system/zenith/default.nix @@ -1,4 +1,11 @@ -{ lib, stdenv, rustPlatform, fetchFromGitHub, IOKit }: +{ lib +, stdenv +, rustPlatform +, fetchFromGitHub +, IOKit +, nvidiaSupport ? false +, makeWrapper +}: rustPlatform.buildRustPackage rec { pname = "zenith"; @@ -11,12 +18,20 @@ rustPlatform.buildRustPackage rec { sha256 = "1bn364rmp0q86rd7vgv4n7x09cdf9m4njcaq92jnk85ni6h147ax"; }; + cargoBuildFlags = lib.optionals nvidiaSupport [ "--features" "nvidia" ]; cargoSha256 = "0c2mk2bcz4qjyqmf11yqhnhy4pqxr77b3c1gvr5jfmjshx4ff7v2"; + nativeBuildInputs = lib.optional nvidiaSupport makeWrapper; buildInputs = lib.optionals stdenv.isDarwin [ IOKit ]; + postInstall = lib.optionalString nvidiaSupport '' + wrapProgram $out/bin/zenith \ + --suffix LD_LIBRARY_PATH : "/run/opengl-driver/lib" + ''; + meta = with lib; { - description = "Sort of like top or htop but with zoom-able charts, network, and disk usage"; + description = "Sort of like top or htop but with zoom-able charts, network, and disk usage" + + lib.optionalString nvidiaSupport ", and NVIDIA GPU usage"; homepage = "https://github.com/bvaisvil/zenith"; license = licenses.mit; maintainers = with maintainers; [ bbigras ]; diff --git a/third_party/nixpkgs/pkgs/tools/text/gjo/default.nix b/third_party/nixpkgs/pkgs/tools/text/gjo/default.nix index 0ab9a54c47..da8fa21294 100644 --- a/third_party/nixpkgs/pkgs/tools/text/gjo/default.nix +++ b/third_party/nixpkgs/pkgs/tools/text/gjo/default.nix @@ -14,7 +14,7 @@ buildGoModule rec { sha256 = "07halr0jzds4rya6hlvp45bjf7vg4yf49w5q60mch05hk8qkjjdw"; }; - vendorSha256 = "0sjjj9z1dhilhpc8pq4154czrb79z9cm044jvn75kxcjv6v5l2m5"; + vendorSha256 = null; meta = with lib; { description = "Small utility to create JSON objects"; diff --git a/third_party/nixpkgs/pkgs/tools/text/jbofihe/default.nix b/third_party/nixpkgs/pkgs/tools/text/jbofihe/default.nix new file mode 100644 index 0000000000..111b019c3b --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/text/jbofihe/default.nix @@ -0,0 +1,29 @@ +{ lib, stdenv, fetchFromGitHub, bison, flex, perl, }: + +stdenv.mkDerivation rec { + pname = "jbofihe"; + version = "0.43"; + + src = fetchFromGitHub { + owner = "lojban"; + repo = "jbofihe"; + rev = "v${version}"; + sha256 = "1xx7x1256sjncyzx656jl6jl546vn8zz0siymqalz6v9yf341p98"; + }; + + nativeBuildInputs = [ bison flex perl ]; + + doCheck = true; + checkPhase = '' + runHook preCheck + (cd tests && ./run *.in) + runHook postCheck + ''; + + meta = with lib; { + description = "Parser & analyser for Lojban"; + homepage = "https://github.com/lojban/jbofihe"; + license = licenses.gpl2Only; + maintainers = with maintainers; [ chkno ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/text/pn/default.nix b/third_party/nixpkgs/pkgs/tools/text/pn/default.nix new file mode 100644 index 0000000000..81e4c1eb35 --- /dev/null +++ b/third_party/nixpkgs/pkgs/tools/text/pn/default.nix @@ -0,0 +1,24 @@ +{ lib, stdenv, fetchFromGitHub, cmake, libphonenumber, icu, protobuf }: + +stdenv.mkDerivation rec { + pname = "pn"; + version = "unstable-2021-01-28"; + + src = fetchFromGitHub { + owner = "Orange-OpenSource"; + repo = pname; + rev = "41e1215397129ed0d42b5f137fb35b5e0648edda"; + sha256 = "1g8r7y230k01ghraa55g1bhz3fiz6bjdgcsddy2dfa5ih8c4s3jm"; + }; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ libphonenumber icu protobuf ]; + + meta = with lib; { + description = "A libphonenumber command-line wrapper"; + homepage = "https://github.com/Orange-OpenSource/pn"; + license = licenses.asl20; + platforms = platforms.unix; + maintainers = [ maintainers.McSinyx ]; + }; +} diff --git a/third_party/nixpkgs/pkgs/tools/text/ripgrep/default.nix b/third_party/nixpkgs/pkgs/tools/text/ripgrep/default.nix index ca337deec9..3fa202135f 100644 --- a/third_party/nixpkgs/pkgs/tools/text/ripgrep/default.nix +++ b/third_party/nixpkgs/pkgs/tools/text/ripgrep/default.nix @@ -11,16 +11,16 @@ rustPlatform.buildRustPackage rec { pname = "ripgrep"; - version = "12.1.1"; + version = "13.0.0"; src = fetchFromGitHub { owner = "BurntSushi"; repo = pname; rev = version; - sha256 = "1hqps7l5qrjh9f914r5i6kmcz6f1yb951nv4lby0cjnp5l253kps"; + sha256 = "0pdcjzfi0fclbzmmf701fdizb95iw427vy3m1svy6gdn2zwj3ldr"; }; - cargoSha256 = "1nyfxma2vwfq6r614ng8qq8vanb540a5z0ibs85wz5sjm3hp1l4f"; + cargoSha256 = "1kfdgh8dra4jxgcdb0lln5wwrimz0dpp33bq3h7jgs8ngaq2a9wp"; cargoBuildFlags = lib.optional withPCRE2 "--features pcre2"; diff --git a/third_party/nixpkgs/pkgs/tools/text/transifex-client/default.nix b/third_party/nixpkgs/pkgs/tools/text/transifex-client/default.nix index a0f3ad1c5e..93c2e64530 100644 --- a/third_party/nixpkgs/pkgs/tools/text/transifex-client/default.nix +++ b/third_party/nixpkgs/pkgs/tools/text/transifex-client/default.nix @@ -27,6 +27,6 @@ buildPythonApplication rec { homepage = "https://www.transifex.com/"; license = licenses.gpl2; description = "Transifex translation service client"; - maintainers = [ maintainers.etu ]; + maintainers = with maintainers; [ ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/text/vale/default.nix b/third_party/nixpkgs/pkgs/tools/text/vale/default.nix index 0de5ea5377..257b11933b 100644 --- a/third_party/nixpkgs/pkgs/tools/text/vale/default.nix +++ b/third_party/nixpkgs/pkgs/tools/text/vale/default.nix @@ -2,7 +2,7 @@ buildGoModule rec { pname = "vale"; - version = "2.10.2"; + version = "2.10.4"; subPackages = [ "cmd/vale" ]; outputs = [ "out" "data" ]; @@ -11,10 +11,10 @@ buildGoModule rec { owner = "errata-ai"; repo = "vale"; rev = "v${version}"; - sha256 = "0cpq2pv6d67fdnm2qbb7p9amk0as8bm4knkywak8fsqadxfadx80"; + sha256 = "0gw7b6gvzp2f7la1mb74bg92nd8zk5fiajsihcqpni2a79js1s6y"; }; - vendorSha256 = "14zimsl0f7sxqqka00krix3q2mxdcpk8n2zh7bz8awjwzn4kg8m3"; + vendorSha256 = "15r97mpsailsa4ja6mh5wrjcjacppm0vwma9q6znsa2f1x2apc6y"; postInstall = '' mkdir -p $data/share/vale diff --git a/third_party/nixpkgs/pkgs/tools/text/vgrep/default.nix b/third_party/nixpkgs/pkgs/tools/text/vgrep/default.nix index a2ac4b5100..edd0416b0e 100644 --- a/third_party/nixpkgs/pkgs/tools/text/vgrep/default.nix +++ b/third_party/nixpkgs/pkgs/tools/text/vgrep/default.nix @@ -27,6 +27,6 @@ buildGoModule rec { description = "User-friendly pager for grep/git-grep/ripgrep"; homepage = "https://github.com/vrothberg/vgrep"; license = licenses.gpl3Only; - maintainers = with maintainers; [ zowoq ]; + maintainers = with maintainers; [ SuperSandro2000 ]; }; } diff --git a/third_party/nixpkgs/pkgs/tools/typesetting/asciidoc/default.nix b/third_party/nixpkgs/pkgs/tools/typesetting/asciidoc/default.nix index 6716d764d5..ce3b142fbc 100644 --- a/third_party/nixpkgs/pkgs/tools/typesetting/asciidoc/default.nix +++ b/third_party/nixpkgs/pkgs/tools/typesetting/asciidoc/default.nix @@ -146,7 +146,7 @@ in stdenv.mkDerivation rec { pname = "asciidoc"; - version = "9.0.4"; + version = "9.1.0"; # Note: a substitution to improve reproducibility should be updated once 10.0.0 is # released. See the comment in `patchPhase` for more information. @@ -154,7 +154,7 @@ stdenv.mkDerivation rec { owner = "asciidoc"; repo = "asciidoc-py3"; rev = version; - sha256 = "1gspxw5i0axymxdjzj5rmhf10gyl2gqr666gz141nv042l9dm5vi"; + sha256 = "1clf1axkns23wfmh48xfspzsnw04pjh4mq1pshpzvj0cwxhz0yaq"; }; nativeBuildInputs = [ python3 unzip autoreconfHook ]; diff --git a/third_party/nixpkgs/pkgs/tools/typesetting/tectonic/default.nix b/third_party/nixpkgs/pkgs/tools/typesetting/tectonic/default.nix index ba72283702..9cbf9ac7e2 100644 --- a/third_party/nixpkgs/pkgs/tools/typesetting/tectonic/default.nix +++ b/third_party/nixpkgs/pkgs/tools/typesetting/tectonic/default.nix @@ -1,25 +1,43 @@ -{ lib, stdenv, fetchFromGitHub, rustPlatform -, darwin, fontconfig, harfbuzz, openssl, pkg-config }: +{ lib +, stdenv +, fetchFromGitHub +, rustPlatform +, darwin +, fontconfig +, harfbuzz +, openssl +, pkg-config +, makeWrapper +, biber +}: rustPlatform.buildRustPackage rec { pname = "tectonic"; - version = "0.4.1"; + version = "0.7.0"; src = fetchFromGitHub { owner = "tectonic-typesetting"; repo = "tectonic"; rev = "tectonic@${version}"; - sha256 = "sha256-XQ3KRM12X80JPFMnQs//8ZJEv+AV1sr3BH0Nw/PH0HQ="; + fetchSubmodules = true; + sha256 = "sha256-CMvT9DouwERhDtBsLDesxN/QgEEfXLgtJaQLjq+SzOI="; }; - cargoSha256 = "sha256-930tFAKMCmTFS9faIWLSVtWN/gAA9UAUMuRo61XISYA="; + cargoSha256 = "sha256-zGsb49yt6SRFfvNHZY+RpjihGpV9ziLsg9BII7WTX2Y="; - nativeBuildInputs = [ pkg-config ]; + nativeBuildInputs = [ pkg-config makeWrapper ]; buildInputs = [ fontconfig harfbuzz openssl ] ++ lib.optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ ApplicationServices Cocoa Foundation ]); - postInstall = lib.optionalString stdenv.isLinux '' + # Tectonic runs biber when it detects it needs to run it, see: + # https://github.com/tectonic-typesetting/tectonic/releases/tag/tectonic%400.7.0 + postInstall = '' + wrapProgram $out/bin/tectonic \ + --prefix PATH "${lib.getBin biber}/bin" + '' + lib.optionalString stdenv.isLinux '' + substituteInPlace dist/appimage/tectonic.desktop \ + --replace Exec=tectonic Exec=$out/bin/tectonic install -D dist/appimage/tectonic.desktop -t $out/share/applications/ install -D dist/appimage/tectonic.svg -t $out/share/icons/hicolor/scalable/apps/ ''; diff --git a/third_party/nixpkgs/pkgs/tools/typesetting/tex/texlive/default.nix b/third_party/nixpkgs/pkgs/tools/typesetting/tex/texlive/default.nix index 4ba42cbce5..c21a5dda99 100644 --- a/third_party/nixpkgs/pkgs/tools/typesetting/tex/texlive/default.nix +++ b/third_party/nixpkgs/pkgs/tools/typesetting/tex/texlive/default.nix @@ -7,6 +7,7 @@ , makeWrapper, python3, ruby, perl , useFixedHashes ? true , recurseIntoAttrs +, fetchpatch }: let # various binaries (compiled) @@ -56,6 +57,37 @@ let collection-plaingeneric = orig.collection-plaingeneric // { deps = orig.collection-plaingeneric.deps // { inherit (tl) xdvi; }; }; + + texdoc = orig.texdoc // { + # build Data.tlpdb.lua (part of the 'tlType == "run"' package) + postUnpack = let + # commit that ensures reproducibility of Data.tlpdb.lua + # remove on the next texdoc update + reproPatch = fetchpatch { + name = "make-data-tlpdb-lua-reproducible.patch"; + url = "https://github.com/TeX-Live/texdoc/commit/82aff83d5453a887c1117b9e771a98bddd8a605a.patch"; + sha256 = "0y04y468i7db4p5bsyyhgzip8q4fi1756x9a15ndha9xfnasbf44"; + stripLen = 2; + extraPrefix = "scripts/texdoc/"; + }; + in '' + if [[ -f "$out"/scripts/texdoc/texdoc.tlu ]]; then + patch -p1 -d "$out" < "${reproPatch}" + + unxz --stdout "${tlpdb}" > texlive.tlpdb + + # create dummy doc file to ensure that texdoc does not return an error + mkdir -p support/texdoc + touch support/texdoc/NEWS + + TEXMFCNF="${bin.core}"/share/texmf-dist/web2c TEXMF="$out" TEXDOCS=. TEXMFVAR=. \ + "${bin.luatex}"/bin/texlua "$out"/scripts/texdoc/texdoc.tlu \ + -c texlive_tlpdb=texlive.tlpdb -lM texdoc + + cp texdoc/cache-tlpdb.lua "$out"/scripts/texdoc/Data.tlpdb.lua + fi + ''; + }; }); # overrides # tl = @@ -93,6 +125,16 @@ let day = "08"; }; + tlpdb = fetchurl { + # use the same mirror(s) as urlPrefixes below + urls = [ + #"http://ftp.math.utah.edu/pub/tex/historic/systems/texlive/2019/tlnet-final/tlpkg/texlive.tlpdb.xz" + #"ftp://tug.org/texlive/historic/2019/tlnet-final/tlpkg/texlive.tlpdb.xz" + "https://texlive.info/tlnet-archive/${snapshot.year}/${snapshot.month}/${snapshot.day}/tlnet/tlpkg/texlive.tlpdb.xz" + ]; + sha512 = "1dsj4bza84g2f2z0w31yil3iwcnggcyg9f1xxwmp6ljk5xlzyr39cb556prx9691zbwpbrwbb5hnbqxqlnwsivgk0pmbl9mbjbk9cz0"; + }; + # create a derivation that contains an unpacked upstream TL package mkPkg = { pname, tlType, revision, version, sha512, postUnpack ? "", stripPrefix ? 1, ... }@args: let @@ -131,6 +173,7 @@ let in if sha512 == "" then # hash stripped from pkgs.nix to save space -> fetch&unpack in a single step + # currently unused as we prefer to keep the sha512 hashes for reproducibility fetchurl { inherit urls; sha1 = if fixedHash == null then throw "TeX Live package ${tlName} is missing hash!" @@ -144,8 +187,7 @@ let // passthru else runCommand "texlive-${tlName}" - ( { # lots of derivations, not meant to be cached - preferLocalBuild = true; allowSubstitutes = false; + ( { inherit passthru; } // lib.optionalAttrs (fixedHash != null) { outputHash = fixedHash; diff --git a/third_party/nixpkgs/pkgs/tools/typesetting/tex/texlive/fixedHashes.nix b/third_party/nixpkgs/pkgs/tools/typesetting/tex/texlive/fixedHashes.nix index 999f5cc93f..d7182086f9 100644 --- a/third_party/nixpkgs/pkgs/tools/typesetting/tex/texlive/fixedHashes.nix +++ b/third_party/nixpkgs/pkgs/tools/typesetting/tex/texlive/fixedHashes.nix @@ -729,7 +729,7 @@ "texdiff.doc-0.4"="r9wsmivjyiwdnav7qc35kydk9b8pbcz8"; "texdirflatten-1.3"="135358h2mb608wg3ni93rrsvvqgxm4ya"; "texdirflatten.doc-1.3"="n9jxdwjiylvwy6n55vgci9a32qi10xhl"; -"texdoc-3.3"="3sjc6kp2l1p97qnhqqby5qcahcfj8irf"; +"texdoc-3.3"="zybis3ds27vzr62qsvkmph787jb12msz"; "texdoc.doc-3.3"="ri2jcsh0ja8wmjs9y9692m0zc0z8gxvi"; "texdoctk-0.6.0"="p6c2lakbnbg1wdc7i4iavscn9k0xamw5"; "texdoctk.doc-0.6.0"="xfl4g9m6d9nbn4f9hgxj58jg9g4laa7l"; diff --git a/third_party/nixpkgs/pkgs/tools/video/atomicparsley/default.nix b/third_party/nixpkgs/pkgs/tools/video/atomicparsley/default.nix index d07d6e5342..92059699e9 100644 --- a/third_party/nixpkgs/pkgs/tools/video/atomicparsley/default.nix +++ b/third_party/nixpkgs/pkgs/tools/video/atomicparsley/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "atomicparsley"; - version = "20210124.204813.840499f"; + version = "20210617.200601.1ac7c08"; src = fetchFromGitHub { owner = "wez"; repo = pname; rev = version; - sha256 = "sha256-/bkfgIWlQobaiad2WD7DUUrTwfYurP7YAINaLTwBEcE="; + sha256 = "sha256-IhZe0vM41JhO8H79ZrRx4FRA4zfB6X0daC8QoE5MHmU="; }; nativeBuildInputs = [ cmake ]; diff --git a/third_party/nixpkgs/pkgs/tools/video/rav1e/default.nix b/third_party/nixpkgs/pkgs/tools/video/rav1e/default.nix index 17c1b39a92..53e139cde3 100644 --- a/third_party/nixpkgs/pkgs/tools/video/rav1e/default.nix +++ b/third_party/nixpkgs/pkgs/tools/video/rav1e/default.nix @@ -1,6 +1,8 @@ -{ stdenv, rustPlatform, fetchurl, fetchFromGitHub, lib, nasm, cargo-c, libiconv }: +{ stdenv, rustPlatform, rust, fetchurl, fetchFromGitHub, lib, nasm, cargo-c, libiconv }: -rustPlatform.buildRustPackage rec { +let + rustTargetPlatformSpec = rust.toRustTargetSpec stdenv.hostPlatform; +in rustPlatform.buildRustPackage rec { pname = "rav1e"; version = "0.4.1"; @@ -31,11 +33,11 @@ rustPlatform.buildRustPackage rec { buildInputs = lib.optionals stdenv.isDarwin [ libiconv ]; postBuild = '' - cargo cbuild --release --frozen --prefix=${placeholder "out"} + cargo cbuild --release --frozen --prefix=${placeholder "out"} --target ${rustTargetPlatformSpec} ''; postInstall = '' - cargo cinstall --release --frozen --prefix=${placeholder "out"} + cargo cinstall --release --frozen --prefix=${placeholder "out"} --target ${rustTargetPlatformSpec} ''; meta = with lib; { diff --git a/third_party/nixpkgs/pkgs/tools/virtualization/awsebcli/default.nix b/third_party/nixpkgs/pkgs/tools/virtualization/awsebcli/default.nix index 1c9e814923..eaaf7046ff 100644 --- a/third_party/nixpkgs/pkgs/tools/virtualization/awsebcli/default.nix +++ b/third_party/nixpkgs/pkgs/tools/virtualization/awsebcli/default.nix @@ -79,7 +79,7 @@ in with localPython.pkgs; buildPythonApplication rec { # Otherwise, awsebcli will try to install it using pip when using some # commands (like "eb local run"). blessed botocore cement colorama dockerpty docopt pathspec pyyaml - requests semantic-version setuptools tabulate termcolor websocket_client + requests semantic-version setuptools tabulate termcolor websocket-client ]; postInstall = '' diff --git a/third_party/nixpkgs/pkgs/tools/virtualization/distrobuilder/default.nix b/third_party/nixpkgs/pkgs/tools/virtualization/distrobuilder/default.nix index d06a2b4a17..a6f479dc71 100644 --- a/third_party/nixpkgs/pkgs/tools/virtualization/distrobuilder/default.nix +++ b/third_party/nixpkgs/pkgs/tools/virtualization/distrobuilder/default.nix @@ -1,31 +1,51 @@ -{ lib, pkg-config, buildGoPackage, fetchFromGitHub -, makeWrapper, coreutils, gnupg, gnutar, squashfsTools, debootstrap +{ lib +, pkg-config +, buildGoModule +, fetchFromGitHub +, makeWrapper +, coreutils +, gnupg +, gnutar +, squashfsTools +, debootstrap }: -let binPath = lib.makeBinPath [ - coreutils gnupg gnutar squashfsTools debootstrap -]; +let + bins = [ + coreutils + gnupg + gnutar + squashfsTools + debootstrap + ]; in -buildGoPackage rec { +buildGoModule rec { pname = "distrobuilder"; - version = "2019_10_07"; - rev = "d686c88c21838f5505c3ec14711b2413604d7f5c"; + version = "1.2"; - goPackagePath = "github.com/lxc/distrobuilder"; + vendorSha256 = "sha256-G5FUO6Ul4dA4MZZI9Ho1kE9ptX31tAWak9rWAoD/iuU="; src = fetchFromGitHub { - inherit rev; owner = "lxc"; repo = "distrobuilder"; - sha256 = "0k59czgasy4d58bkrin6hvgmh7y3nf177lwd0y4g47af27bgnyc4"; + rev = "distrobuilder-${version}"; + sha256 = "CE3Tq0oWpVZnSfBBY3/2E2GdZLFsO0NzkPABT8lu+TY="; + fetchSubmodules = false; }; - goDeps = ./deps.nix; + buildInputs = bins; + + # tests require a local keyserver (mkg20001/nixpkgs branch distrobuilder-with-tests) but gpg is currently broken in tests + doCheck = false; + + nativeBuildInputs = [ + pkg-config + makeWrapper + ] ++ bins; postInstall = '' - wrapProgram $out/bin/distrobuilder --prefix PATH ":" ${binPath} + wrapProgram $out/bin/distrobuilder --prefix PATH ":" ${lib.makeBinPath bins} ''; - nativeBuildInputs = [ pkg-config makeWrapper ]; meta = with lib; { description = "System container image builder for LXC and LXD"; @@ -35,4 +55,3 @@ buildGoPackage rec { platforms = platforms.linux; }; } - diff --git a/third_party/nixpkgs/pkgs/tools/virtualization/linode-cli/default.nix b/third_party/nixpkgs/pkgs/tools/virtualization/linode-cli/default.nix index 155daf41a7..b30c4b8865 100644 --- a/third_party/nixpkgs/pkgs/tools/virtualization/linode-cli/default.nix +++ b/third_party/nixpkgs/pkgs/tools/virtualization/linode-cli/default.nix @@ -1,33 +1,33 @@ { lib -, buildPythonApplication , fetchFromGitHub , fetchurl -, terminaltables +, buildPythonApplication , colorclass -, requests -, pyyaml -, setuptools , installShellFiles +, pyyaml +, requests +, setuptools +, terminaltables }: let - + specVersion = "4.96.0"; # Version taken from: https://www.linode.com/docs/api/openapi.yaml at `info.version`. spec = fetchurl { - url = "https://raw.githubusercontent.com/linode/linode-api-docs/v4.89.0/openapi.yaml"; - sha256 = "sha256-R7Dmq8ifGEjh47ftuoGrbymYBsPCj/ULz0j1OqJDcwY="; + url = "https://raw.githubusercontent.com/linode/linode-api-docs/v${specVersion}/openapi.yaml"; + sha256 = "sha256-4+j5BBTOFLLiA+n0YEUH/ICK4Iuxr6nNB7ZRrYACW2I="; }; in buildPythonApplication rec { pname = "linode-cli"; - version = "5.0.1"; + version = "5.4.3"; src = fetchFromGitHub { owner = "linode"; repo = pname; rev = version; - sha256 = "sha256-zelopRaHaDCnbYA/y7dNMBh70g0+wuc6t9LH/VLaUIk="; + sha256 = "sha256-hljvcYtck89Lzje0XgnvYqh+jebOEOFnOkgEnGZJm0o="; }; # remove need for git history @@ -37,11 +37,11 @@ buildPythonApplication rec { ''; propagatedBuildInputs = [ - terminaltables colorclass - requests pyyaml + requests setuptools + terminaltables ]; postConfigure = '' @@ -60,10 +60,9 @@ buildPythonApplication rec { ''; meta = with lib; { - homepage = "https://github.com/linode/linode-cli"; description = "The Linode Command Line Interface"; + homepage = "https://github.com/linode/linode-cli"; license = licenses.bsd3; maintainers = with maintainers; [ ryantm superherointj ]; }; - } diff --git a/third_party/nixpkgs/pkgs/tools/wayland/clipman/default.nix b/third_party/nixpkgs/pkgs/tools/wayland/clipman/default.nix index 3a2c2ca601..d5ed6ae88f 100644 --- a/third_party/nixpkgs/pkgs/tools/wayland/clipman/default.nix +++ b/third_party/nixpkgs/pkgs/tools/wayland/clipman/default.nix @@ -7,16 +7,16 @@ buildGoModule rec { pname = "clipman"; - version = "1.5.2"; + version = "1.6.0"; src = fetchFromGitHub { owner = "yory8"; repo = pname; rev = "v${version}"; - sha256 = "1lf5fbzplyc1mpdqgfwbrn8m5568vhjf48580fvvfgbhz6zcil8n"; + sha256 = "sha256-Yq71nYNL3bFvwhVzrQ1g8n7/4tMmLuYUJ9pMBmxL8e8="; }; - vendorSha256 = "18jw4z0lcrh00yjr3qdkgvlrpfwqbsm0ncz7fp1h72pzkh41byv7"; + vendorSha256 = "sha256-Z/sVCJz/igPDdeczC6pemLub6X6z4ZGlBwBmRsEnXKI="; doCheck = false; diff --git a/third_party/nixpkgs/pkgs/tools/wayland/kanshi/default.nix b/third_party/nixpkgs/pkgs/tools/wayland/kanshi/default.nix index c661c98a24..6373af70b2 100644 --- a/third_party/nixpkgs/pkgs/tools/wayland/kanshi/default.nix +++ b/third_party/nixpkgs/pkgs/tools/wayland/kanshi/default.nix @@ -10,13 +10,13 @@ stdenv.mkDerivation rec { pname = "kanshi"; - version = "1.1.0"; + version = "1.2.0"; src = fetchFromGitHub { owner = "emersion"; repo = "kanshi"; rev = "v${version}"; - sha256 = "0nbpgm8qnn7ljsg9vgs35kl8l4rrk542vdcbx8wrn9r909ld3x92"; + sha256 = "sha256-RVMeS2qEjTYK6r7IwMeFSqfRpKR8di2eQXhewfhTnYI="; }; nativeBuildInputs = [ meson ninja pkg-config scdoc ]; diff --git a/third_party/nixpkgs/pkgs/top-level/aliases.nix b/third_party/nixpkgs/pkgs/top-level/aliases.nix index 89553642a2..5bfaed5ac4 100644 --- a/third_party/nixpkgs/pkgs/top-level/aliases.nix +++ b/third_party/nixpkgs/pkgs/top-level/aliases.nix @@ -40,8 +40,14 @@ mapAliases ({ adobe_flex_sdk = apache-flex-sdk; # added 2018-06-01 ag = silver-searcher; # added 2018-04-25 aircrackng = aircrack-ng; # added 2016-01-14 - alienfx = throw "alienfx has been removed."; # added 2019-12-08 aleth = throw "aleth (previously packaged as cpp_ethereum) has been removed; abandoned upstream."; # added 2020-11-30 + alienfx = throw "alienfx has been removed."; # added 2019-12-08 + alsaLib = alsa-lib; # added 2021-06-09 + alsaOss = alsa-oss; # added 2021-06-10 + alsaPlugins = alsa-plugins; # added 2021-06-10 + alsaPluginWrapper = alsa-plugins-wrapper; # added 2021-06-10 + alsaTools = alsa-tools; # added 2021-06-10 + alsaUtils = alsa-utils; # added 2021-06-10 amazon-glacier-cmd-interface = throw "amazon-glacier-cmd-interface has been removed due to it being unmaintained."; # added 2020-10-30 ammonite-repl = ammonite; # added 2017-05-02 amsn = throw "amsn has been removed due to being unmaintained."; # added 2020-12-09 @@ -64,6 +70,7 @@ mapAliases ({ aucdtect = throw "aucdtect: Upstream no longer provides download urls."; # added 2020-12-26 avldrums-lv2 = x42-avldrums; # added 2020-03-29 avxsynth = throw "avxsynth was removed because it was broken"; # added 2021-05-18 + badtouch = authoscope; # Project was renamed, added 20210626 bar-xft = lemonbar-xft; # added 2015-01-16 bashCompletion = bash-completion; # Added 2016-09-28 batti = throw "batti has been removed from nixpkgs, as it was unmaintained"; # added 2019-12-10 @@ -111,6 +118,7 @@ mapAliases ({ clang9Stdenv = lowPrio llvmPackages_9.stdenv; clang10Stdenv = lowPrio llvmPackages_10.stdenv; clang11Stdenv = lowPrio llvmPackages_11.stdenv; + clang12Stdenv = lowPrio llvmPackages_12.stdenv; clangAnalyzer = clang-analyzer; # added 2015-02-20 clawsMail = claws-mail; # added 2016-04-29 @@ -152,6 +160,7 @@ mapAliases ({ cups-googlecloudprint = throw "Google Cloudprint is officially discontinued since Jan 2021, more info https://support.google.com/chrome/a/answer/9633006"; cquery = throw "cquery has been removed because it is abandoned by upstream. Consider switching to clangd or ccls instead."; # added 2020-06-15 cv = progress; # added 2015-09-06 + cvs_fast_export = cvs-fast-export; # added 2021-06-10 d1x_rebirth = dxx-rebirth; # added 2018-04-25 d2x_rebirth = dxx-rebirth; # added 2018-04-25 dart_dev = throw "Non-stable versions of Dart have been removed."; # added 2020-01-15 @@ -237,6 +246,7 @@ mapAliases ({ ''; font-droid = throw "font-droid has been deprecated by noto-fonts"; # 2019-04-12 foomatic_filters = foomatic-filters; # 2016-08 + fsharp41 = throw "fsharp41 has been removed, please use dotnet-sdk_5 or later"; fuse_exfat = exfat; # 2015-09-11 fuseki = apache-jena-fuseki; # added 2018-04-25 fusesmb = throw "fusesmb is abandoned by upstream"; # added 2019-10-15 @@ -400,6 +410,7 @@ mapAliases ({ libqrencode = qrencode; # added 2019-01-01 librdf = lrdf; # added 2020-03-22 librecad2 = librecad; # backwards compatibility alias, added 2015-10 + libseat = seatd; # added 2021-06-24 libsysfs = sysfsutils; # added 2018-04-25 libtidy = html-tidy; # added 2014-12-21 libtxc_dxtn = throw "libtxc_dxtn was removed 2020-03-16, now integrated in Mesa"; @@ -410,6 +421,7 @@ mapAliases ({ libsexy = throw "libsexy has been removed from nixpkgs, as it's abandoned and no package needed it."; # 2019-12-10 libstdcxxHook = throw "libstdcxx hook has been removed because cc-wrapper is now directly aware of the c++ standard library intended to be used."; # 2020-06-22 libqmatrixclient = throw "libqmatrixclient was renamed to libquotient"; # added 2020-04-09 + libwnck3 = libwnck; lilypond-unstable = lilypond; # added 2021-03-11 links = links2; # added 2016-01-31 linux_rpi0 = linux_rpi1; @@ -482,6 +494,7 @@ mapAliases ({ mxisd = throw "mxisd has been removed from nixpkgs as it has reached end of life, see https://github.com/kamax-matrix/mxisd/blob/535e0a5b96ab63cb0ddef90f6f42c5866407df95/EOL.md#end-of-life-notice . ma1sd may be a suitable alternative."; # added 2021-04-15 mysqlWorkbench = mysql-workbench; # added 2017-01-19 nagiosPluginsOfficial = monitoring-plugins; + navit = throw "navit has been removed from nixpkgs, due to being unmaintained"; # added 2021-06-07 ncat = nmap; # added 2016-01-26 netcat-openbsd = libressl.nc; # added 2018-04-25 netease-cloud-music = throw "netease-cloud-music has been removed together with deepin"; # added 2020-08-31 @@ -513,6 +526,7 @@ mapAliases ({ openjpeg_2 = openjpeg; # added 2021-01-25 opensans-ttf = open-sans; # added 2018-12-04 openssh_with_kerberos = openssh; # added 2018-01-28 + orchis = orchis-theme; # added 2021-06-09 onnxruntime = throw "onnxruntime has been removed due to poor maintainability"; # added 2020-12-04 osquery = throw "osquery has been removed."; # added 2019-11-24 osxfuse = macfuse-stubs; # added 2021-03-20 @@ -591,6 +605,7 @@ mapAliases ({ pkgconfig = pkg-config; # added 2018-02-02, moved to aliases.nix 2021-01-18 pkgconfigUpstream = pkg-configUpstream; # added 2018-02-02 planner = throw "planner has been removed from nixpkgs, as it is no longer developed and still uses python2/PyGTK."; # added 2021-02-02 + pleroma-otp = pleroma; # added 2021-07-10 pltScheme = racket; # just to be sure plexpy = tautulli; # plexpy got renamed to tautulli, added 2019-02-22 pmtools = acpica-tools; # added 2018-11-01 @@ -806,6 +821,7 @@ mapAliases ({ telepathy_qt5 = libsForQt5.telepathy; # added 2015-12-19 telepathy_salut = telepathy-salut; # added 2018-02-25 telnet = inetutils; # added 2018-05-15 + terraform_1_0_0 = terraform_1_0; # added 2021-06-15 terraform-provider-ibm = terraform-providers.ibm; # added 2018-09-28 terraform-provider-libvirt = terraform-providers.libvirt; # added 2018-09-28 terraform-provider-lxd = terraform-providers.lxd; # added 2020-03-16 @@ -818,7 +834,9 @@ mapAliases ({ tex-gyre-termes-math = tex-gyre-math.termes; # added 2018-04-03 tftp_hpa = tftp-hpa; # added 2015-04-03 timescale-prometheus = promscale; # added 2020-09-29 - tomcat85 = tomcat8; # added 2020-03-11 + tomcat7 = throw "tomcat7 has been removed from nixpkgs as it has reached end of life."; # added 2022-06-16 + tomcat8 = throw "tomcat8 has been removed from nixpkgs as it has reached end of life."; # added 2022-06-16 + tomcat85 = throw "tomcat85 has been removed from nixpkgs as it has reached end of life."; # added 2020-03-11 torbrowser = tor-browser-bundle-bin; # added 2017-04-05 torch = throw "torch has been removed, as the upstream project has been abandoned"; # added 2020-03-28 torch-hdf5 = throw "torch-hdf5 has been removed, as the upstream project has been abandoned"; # added 2020-03-28 @@ -992,6 +1010,8 @@ mapAliases ({ /* Added 2021-01-02 */ ttyrec = ovh-ttyrec; + tt-rss-plugin-tumblr-gdpr = throw "tt-rss-plugin-tumblr-gdpr was removed because tumblr does not require gdpr acceptance to fetch rss feeds anymore"; # added 2012-06-12 + zplugin = zinit; # Added 2021-01-30 posix_man_pages = man-pages-posix; # Added 2021-04-15 @@ -1002,6 +1022,38 @@ mapAliases ({ & maintenance is abandoned by upstream. ''; + # Added 2021-06-01 + obs-gstreamer = throw '' + obs-gstreamer has been converted into a plugin for use with wrapOBS. + Its new location is obs-studio-plugins.obs-gstreamer. + ''; + + # Added 2021-06-01 + obs-move-transition = throw '' + obs-move-transition has been converted into a plugin for use with wrapOBS. + Its new location is obs-studio-plugins.obs-move-transition. + ''; + + # Added 2021-06-01 + obs-multi-rtmp = throw '' + obs-multi-rtmp has been converted into a plugin for use with wrapOBS. + Its new location is obs-studio-plugins.obs-multi-rtmp. + ''; + + # Added 2021-06-01 + obs-ndi = throw '' + obs-ndi has been converted into a plugin for use with wrapOBS. + Its new location is obs-studio-plugins.obs-ndi. + ''; + + obs-v4l2sink = throw "obs-v4l2sink is integrated into upstream OBS since version 26.1"; # Added 2021-06-01 + + # Added 2021-06-01 + obs-wlrobs = throw '' + wlrobs has been converted into a plugin for use with wrapOBS. + Its new location is obs-studio-plugins.wlrobs. + ''; + /* If these are in the scope of all-packages.nix, they cause collisions between mixed versions of qt. See: https://github.com/NixOS/nixpkgs/pull/101369 */ diff --git a/third_party/nixpkgs/pkgs/top-level/all-packages.nix b/third_party/nixpkgs/pkgs/top-level/all-packages.nix index dfdcf9bfe7..5afb6fa3f6 100644 --- a/third_party/nixpkgs/pkgs/top-level/all-packages.nix +++ b/third_party/nixpkgs/pkgs/top-level/all-packages.nix @@ -176,6 +176,8 @@ in alda = callPackage ../development/interpreters/alda { }; + althttpd = callPackage ../servers/althttpd { }; + among-sus = callPackage ../games/among-sus { }; ankisyncd = callPackage ../servers/ankisyncd { }; @@ -202,6 +204,8 @@ in buf = callPackage ../development/tools/buf { }; + elfcat = callPackage ../tools/misc/elfcat { }; + # Zip file format only allows times after year 1980, which makes e.g. Python wheel building fail with: # ValueError: ZIP does not support timestamps before 1980 ensureNewerSourcesForZipFilesHook = ensureNewerSourcesHook { year = "1980"; }; @@ -618,6 +622,7 @@ in }; mkShell = callPackage ../build-support/mkshell { }; + mkShellNoCC = mkShell.override { stdenv = stdenvNoCC; }; nixBufferBuilders = import ../build-support/emacs/buffer.nix { inherit (pkgs) lib writeText; inherit (emacs.pkgs) inherit-local; }; @@ -763,15 +768,17 @@ in adafruit-ampy = callPackage ../tools/misc/adafruit-ampy { }; - adlplug = callPackage ../applications/audio/adlplug { }; + adlplug = callPackage ../applications/audio/adlplug { + inherit (darwin) libobjc; + inherit (darwin.apple_sdk.frameworks) Cocoa CoreServices WebKit DiscRecording; + jack = libjack2; + }; + opnplug = adlplug.override { + type = "OPN"; + }; arc_unpacker = callPackage ../tools/archivers/arc_unpacker { }; - opnplug = callPackage ../applications/audio/adlplug { - adlplugChip = "-DADLplug_CHIP=OPN2"; - pname = "OPNplug"; - }; - adminer = callPackage ../servers/adminer { }; advancecomp = callPackage ../tools/compression/advancecomp {}; @@ -872,6 +879,8 @@ in quich = callPackage ../tools/misc/quich { } ; + redfang = callPackage ../tools/networking/redfang { }; + tfk8s = callPackage ../tools/misc/tfk8s { }; tnat64 = callPackage ../tools/networking/tnat64 { }; @@ -907,6 +916,8 @@ in archi = callPackage ../tools/misc/archi { }; + contour = libsForQt5.callPackage ../applications/terminal-emulators/contour { }; + cool-retro-term = libsForQt5.callPackage ../applications/terminal-emulators/cool-retro-term { }; eterm = callPackage ../applications/terminal-emulators/eterm { }; @@ -942,9 +953,7 @@ in flavour = "git"; }; - logseq = callPackage ../applications/misc/logseq { - electron = electron_12; - }; + logseq = callPackage ../applications/misc/logseq { }; lxterminal = callPackage ../applications/terminal-emulators/lxterminal { }; @@ -1006,6 +1015,8 @@ in tilix = callPackage ../applications/terminal-emulators/tilix { }; + timedoctor = callPackage ../applications/office/timedoctor { }; + twine = with python3Packages; toPythonApplication twine; wayst = callPackage ../applications/terminal-emulators/wayst { }; @@ -1063,6 +1074,8 @@ in apfs-fuse = callPackage ../tools/filesystems/apfs-fuse { }; + apfsprogs = callPackage ../tools/filesystems/apfsprogs { }; + apk-tools = callPackage ../tools/package-management/apk-tools { lua = lua5_3; }; @@ -1275,6 +1288,8 @@ in barman = python3Packages.callPackage ../tools/misc/barman { }; + base16-universal-manager = callPackage ../applications/misc/base16-universal-manager { }; + bashate = python3Packages.callPackage ../development/tools/bashate { }; bash-my-aws = callPackage ../tools/admin/bash-my-aws { }; @@ -1523,8 +1538,12 @@ in github-commenter = callPackage ../development/tools/github-commenter { }; + github-to-sqlite = with python3Packages; toPythonApplication github-to-sqlite; + gitless = callPackage ../applications/version-management/gitless { python = python3; }; + gitlint = python3Packages.callPackage ../tools/misc/gitlint { }; + gitter = callPackage ../applications/networking/instant-messengers/gitter { }; gjs = callPackage ../development/libraries/gjs { }; @@ -1758,6 +1777,10 @@ in atftp = callPackage ../tools/networking/atftp { }; + authoscope = callPackage ../tools/security/authoscope { + inherit (darwin.apple_sdk.frameworks) Security; + }; + autogen = callPackage ../development/tools/misc/autogen { }; autojump = callPackage ../tools/misc/autojump { }; @@ -1808,10 +1831,6 @@ in backblaze-b2 = callPackage ../development/tools/backblaze-b2 { }; - badtouch = callPackage ../tools/security/badtouch { - inherit (darwin.apple_sdk.frameworks) Security; - }; - bandwhich = callPackage ../tools/networking/bandwhich { inherit (darwin.apple_sdk.frameworks) Security; }; @@ -1846,6 +1865,8 @@ in bat-extras = recurseIntoAttrs (callPackages ../tools/misc/bat-extras { }); + beats = callPackage ../tools/misc/beats { }; + beauty-line-icon-theme = callPackage ../data/icons/beauty-line-icon-theme { inherit (plasma5Packages) breeze-icons; }; @@ -1946,6 +1967,8 @@ in cudaSupport = config.cudaSupport or false; }; + tensorflow-lite = callPackage ../development/libraries/science/math/tensorflow-lite { }; + behdad-fonts = callPackage ../data/fonts/behdad-fonts { }; bfetch = callPackage ../tools/misc/bfetch { }; @@ -2224,6 +2247,8 @@ in commitizen = callPackage ../applications/version-management/commitizen {}; + common-licenses = callPackage ../data/misc/common-licenses {}; + compactor = callPackage ../applications/networking/compactor { }; consul = callPackage ../servers/consul { }; @@ -2546,6 +2571,10 @@ in electronplayer = callPackage ../applications/video/electronplayer/electronplayer.nix { }; + electron-mail = callPackage ../applications/networking/mailreaders/electron-mail { }; + + element = callPackage ../applications/science/chemistry/element { }; + element-desktop = callPackage ../applications/networking/instant-messengers/element/element-desktop.nix { }; element-web = callPackage ../applications/networking/instant-messengers/element/element-web.nix { @@ -2797,6 +2826,10 @@ in gti = callPackage ../tools/misc/gti { }; + grapejuice = callPackage ../games/grapejuice { + wine = wineWowPackages.unstable; + }; + hdate = callPackage ../applications/misc/hdate { }; heatseeker = callPackage ../tools/misc/heatseeker { }; @@ -2857,6 +2890,8 @@ in joycond = callPackage ../os-specific/linux/joycond { }; + joystickwake = callPackage ../tools/games/joystickwake {}; + jwt-cli = callPackage ../tools/security/jwt-cli { inherit (darwin.apple_sdk.frameworks) Security; }; @@ -3033,12 +3068,16 @@ in nixpkgs-pytools = with python3.pkgs; toPythonApplication nixpkgs-pytools; + notemap = callPackage ../tools/networking/notemap { }; + noteshrink = callPackage ../tools/misc/noteshrink { }; noti = callPackage ../tools/misc/noti { inherit (darwin.apple_sdk.frameworks) Cocoa; }; + notify = callPackage ../tools/misc/notify { }; + nrsc5 = callPackage ../applications/misc/nrsc5 { }; nwipe = callPackage ../tools/security/nwipe { }; @@ -3099,6 +3138,8 @@ in playerctl = callPackage ../tools/audio/playerctl { }; + pn = callPackage ../tools/text/pn { }; + poweralertd = callPackage ../tools/misc/poweralertd { }; ps_mem = callPackage ../tools/system/ps_mem { }; @@ -3525,6 +3566,8 @@ in nrg2iso = callPackage ../tools/cd-dvd/nrg2iso { }; + ceph-csi = callPackage ../tools/filesystems/ceph-csi { }; + libceph = ceph.lib; inherit (callPackages ../tools/filesystems/ceph { boost = boost17x.override { enablePython = true; python = python3; }; @@ -3539,6 +3582,8 @@ in cfdg = callPackage ../tools/graphics/cfdg { }; + cglm = callPackage ../development/libraries/cglm { }; + cgreen = callPackage ../development/libraries/cgreen { }; checkinstall = callPackage ../tools/package-management/checkinstall { }; @@ -3768,6 +3813,8 @@ in age = callPackage ../tools/security/age { }; + agebox = callPackage ../tools/security/agebox { }; + brotli = callPackage ../tools/compression/brotli { }; biosdevname = callPackage ../tools/networking/biosdevname { }; @@ -3818,10 +3865,16 @@ in cloud-utils = callPackage ../tools/misc/cloud-utils { }; + cobalt = callPackage ../applications/misc/cobalt { }; + cocoapods = callPackage ../development/mobile/cocoapods { }; cocoapods-beta = lowPrio (callPackage ../development/mobile/cocoapods { beta = true; }); + cocom = callPackage ../tools/networking/cocom { + inherit (darwin.apple_sdk.frameworks) Security; + }; + codebraid = callPackage ../tools/misc/codebraid { }; compass = callPackage ../development/tools/compass { }; @@ -3931,7 +3984,7 @@ in cwebbin = callPackage ../development/tools/misc/cwebbin { }; - cvs_fast_export = callPackage ../applications/version-management/cvs-fast-export { }; + cvs-fast-export = callPackage ../applications/version-management/cvs-fast-export { }; dadadodo = callPackage ../tools/text/dadadodo { }; @@ -4253,6 +4306,8 @@ in ecryptfs-helper = callPackage ../tools/security/ecryptfs/helper.nix { }; + edgetpu-compiler = callPackage ../development/libraries/science/robotics/edgetpu-compiler { }; + edid-decode = callPackage ../tools/misc/edid-decode { }; edid-generator = callPackage ../tools/misc/edid-generator { }; @@ -4338,8 +4393,12 @@ in trompeloeil = callPackage ../development/libraries/trompeloeil { }; + updog = callPackage ../tools/networking/updog { }; + uudeview = callPackage ../tools/misc/uudeview { }; + uusi = haskell.lib.justStaticExecutables haskellPackages.uusi; + uutils-coreutils = callPackage ../tools/misc/uutils-coreutils { inherit (python3Packages) sphinx; inherit (darwin.apple_sdk.frameworks) Security; @@ -4351,7 +4410,9 @@ in vorta = libsForQt5.callPackage ../applications/backup/vorta { }; - vowpal-wabbit = callPackage ../applications/science/machine-learning/vowpal-wabbit { }; + vowpal-wabbit = callPackage ../applications/science/machine-learning/vowpal-wabbit { + boost = boost17x; + }; utahfs = callPackage ../applications/networking/utahfs { }; @@ -4755,6 +4816,8 @@ in flips = callPackage ../tools/compression/flips { }; + flowblade = callPackage ../applications/video/flowblade { }; + fmbt = callPackage ../development/tools/fmbt { python = python2; }; @@ -4839,6 +4902,10 @@ in frescobaldi = python3Packages.callPackage ../misc/frescobaldi {}; + freshfetch = callPackage ../tools/misc/freshfetch { + inherit (darwin.apple_sdk.frameworks) AppKit CoreFoundation DiskArbitration Foundation IOKit; + }; + frostwire = callPackage ../applications/networking/p2p/frostwire { }; frostwire-bin = callPackage ../applications/networking/p2p/frostwire/frostwire-bin.nix { }; @@ -5023,6 +5090,8 @@ in git-big-picture = callPackage ../applications/version-management/git-and-tools/git-big-picture { }; + git-branchless = callPackage ../applications/version-management/git-and-tools/git-branchless { }; + inherit (haskellPackages) git-brunch; git-bug = callPackage ../applications/version-management/git-and-tools/git-bug { }; @@ -5297,6 +5366,8 @@ in go-mtpfs = callPackage ../tools/filesystems/go-mtpfs { }; + goofys = callPackage ../tools/filesystems/goofys { }; + go-sct = callPackage ../tools/X11/go-sct { }; # rename to upower-notify? @@ -5339,6 +5410,8 @@ in govc = callPackage ../tools/virtualization/govc { }; + goverlay = callPackage ../tools/graphics/goverlay { }; + gpart = callPackage ../tools/filesystems/gpart { }; gparted = callPackage ../tools/misc/gparted { }; @@ -5571,6 +5644,8 @@ in hash_extender = callPackage ../tools/security/hash_extender { }; + hash-identifier = callPackage ../tools/security/hash-identifier { }; + hash-slinger = callPackage ../tools/security/hash-slinger { }; haskell-language-server = callPackage ../development/tools/haskell/haskell-language-server/withWrapper.nix { }; @@ -5687,6 +5762,8 @@ in hping = callPackage ../tools/networking/hping { }; + hqplayer-desktop = libsForQt5.callPackage ../applications/audio/hqplayer-desktop { }; + html-proofer = callPackage ../tools/misc/html-proofer { }; htpdate = callPackage ../tools/networking/htpdate { }; @@ -6293,6 +6370,8 @@ in inherit (darwin.apple_sdk.frameworks) Security; }; + mathpix-snipping-tool = callPackage ../tools/misc/mathpix-snipping-tool { }; + /* Python 3.8 is currently broken with matrix-synapse since `python38Packages.bleach` fails (https://github.com/NixOS/nixpkgs/issues/76093) */ matrix-synapse = callPackage ../servers/matrix-synapse { /*python3 = python38;*/ }; @@ -6478,6 +6557,9 @@ in ispell = callPackage ../tools/text/ispell {}; iodash = callPackage ../development/libraries/iodash { }; + + jbofihe = callPackage ../tools/text/jbofihe {}; + jumanpp = callPackage ../tools/text/jumanpp {}; jump = callPackage ../tools/system/jump {}; @@ -6502,6 +6584,10 @@ in leela = callPackage ../tools/graphics/leela { }; + lethe = callPackage ../tools/security/lethe { + inherit (darwin.apple_sdk.frameworks) Security; + }; + lftp = callPackage ../tools/networking/lftp { }; libck = callPackage ../development/libraries/libck { }; @@ -6537,10 +6623,14 @@ in # Needed for apps that still depend on the unstable verison of the library (not libhandy-1) libhandy_0 = callPackage ../development/libraries/libhandy/0.x.nix { }; + libgmpris = callPackage ../development/libraries/libgmpris { }; + libgumath = callPackage ../development/libraries/libgumath { }; libinsane = callPackage ../development/libraries/libinsane { }; + libint = callPackage ../development/libraries/libint {}; + libipfix = callPackage ../development/libraries/libipfix { }; libircclient = callPackage ../development/libraries/libircclient { }; @@ -7002,7 +7092,9 @@ in munge = callPackage ../tools/security/munge { }; - munt = libsForQt5.callPackage ../applications/audio/munt { }; + munt = libsForQt5.callPackage ../applications/audio/munt { + jack = libjack2; + }; mutagen = callPackage ../tools/misc/mutagen { }; @@ -7200,13 +7292,7 @@ in nvchecker = with python3Packages; toPythonApplication nvchecker; - nvfetcher = with haskell.lib; overrideCabal (justStaticExecutables haskellPackages.nvfetcher) (drv: { - executableToolDepends = [ makeWrapper ]; - postInstall = '' - wrapProgram $out/bin/nvfetcher \ - --prefix PATH ":" "${nvchecker}/bin:${nix-prefetch-git}/bin" - ''; - }); + nvfetcher = haskell.lib.justStaticExecutables haskellPackages.nvfetcher; miller = callPackage ../tools/text/miller { }; @@ -7232,6 +7318,8 @@ in pcmsolver = callPackage ../development/libraries/pcmsolver { }; + pgbadger = perlPackages.callPackage ../tools/misc/pgbadger { }; + phash = callPackage ../development/libraries/phash { }; pnmixer = callPackage ../tools/audio/pnmixer { }; @@ -7553,8 +7641,7 @@ in olsrd = callPackage ../tools/networking/olsrd { }; opl3bankeditor = libsForQt5.callPackage ../tools/audio/opl3bankeditor { }; - - opn2bankeditor = callPackage ../tools/audio/opl3bankeditor/opn2bankeditor.nix { }; + opn2bankeditor = libsForQt5.callPackage ../tools/audio/opl3bankeditor/opn2bankeditor.nix { }; orangefs = callPackage ../tools/filesystems/orangefs { autoreconfHook = buildPackages.autoreconfHook269; @@ -7855,7 +7942,7 @@ in tautulli = python3Packages.callPackage ../servers/tautulli { }; - pleroma-otp = callPackage ../servers/pleroma-otp { }; + pleroma = callPackage ../servers/pleroma { }; ploticus = callPackage ../tools/graphics/ploticus { libpng = libpng12; @@ -8047,6 +8134,8 @@ in pywal = with python3Packages; toPythonApplication pywal; + pystring = callPackage ../development/libraries/pystring {}; + rbw = callPackage ../tools/security/rbw { inherit (darwin.apple_sdk.frameworks) Security; }; @@ -8308,6 +8397,8 @@ in rnnoise-plugin = callPackage ../development/libraries/rnnoise-plugin {}; + rnp = callPackage ../tools/security/rnp { }; + rnv = callPackage ../tools/text/xml/rnv { }; rosie = callPackage ../tools/text/rosie { }; @@ -8670,6 +8761,8 @@ in # Not updated upstream since 2018, doesn't support qt newer than 5.12 sleepyhead = libsForQt512.callPackage ../applications/misc/sleepyhead {}; + slides = callPackage ../applications/misc/slides { }; + slirp4netns = callPackage ../tools/networking/slirp4netns/default.nix { }; slsnif = callPackage ../tools/misc/slsnif { }; @@ -9340,7 +9433,7 @@ in twitterBootstrap = callPackage ../development/web/twitter-bootstrap {}; - twtxt = callPackage ../applications/networking/twtxt { }; + twtxt = python3Packages.callPackage ../applications/networking/twtxt { }; txr = callPackage ../tools/misc/txr { stdenv = clangStdenv; }; @@ -9364,6 +9457,8 @@ in ubertooth = callPackage ../applications/radio/ubertooth { }; + ucarp = callPackage ../servers/ucarp { }; + ucl = callPackage ../development/libraries/ucl { }; ucspi-tcp = callPackage ../tools/networking/ucspi-tcp { }; @@ -9537,6 +9632,8 @@ in vpnc = callPackage ../tools/networking/vpnc { }; + vpnc-scripts = callPackage ../tools/networking/vpnc-scripts { }; + vpn-slice = python3Packages.callPackage ../tools/networking/vpn-slice { }; vp = callPackage ../applications/misc/vp { @@ -9549,18 +9646,23 @@ in openconnect = openconnect_gnutls; openconnect_openssl = callPackage ../tools/networking/openconnect { + inherit (darwin.apple_sdk.frameworks) PCSC; gnutls = null; }; openconnect_gnutls = callPackage ../tools/networking/openconnect { + inherit (darwin.apple_sdk.frameworks) PCSC; openssl = null; }; openconnect_head = callPackage ../tools/networking/openconnect { + inherit (darwin.apple_sdk.frameworks) PCSC; head = true; openssl = null; }; + globalprotect-openconnect = libsForQt5.callPackage ../tools/networking/globalprotect-openconnect { }; + ding-libs = callPackage ../tools/misc/ding-libs { }; sssd = callPackage ../os-specific/linux/sssd { @@ -9568,6 +9670,10 @@ in inherit (python27Packages) ldap; }; + sentry-cli = callPackage ../development/tools/sentry-cli { + inherit (darwin.apple_sdk.frameworks) Security; + }; + vtun = callPackage ../tools/networking/vtun { openssl = openssl_1_0_2; }; @@ -9712,6 +9818,9 @@ in inherit (darwin.apple_sdk.frameworks) Security; }; + truecrack = callPackage ../tools/security/truecrack { }; + truecrack-cuda = truecrack.override { cudaSupport = true; }; + ts = callPackage ../tools/system/ts { }; transfig = callPackage ../tools/graphics/transfig { @@ -9765,6 +9874,8 @@ in unrar = callPackage ../tools/archivers/unrar { }; + vul = callPackage ../applications/misc/vul { }; + xar = callPackage ../tools/compression/xar { }; xarchive = callPackage ../tools/archivers/xarchive { }; @@ -9962,6 +10073,8 @@ in clipnotify = callPackage ../tools/misc/clipnotify { }; + clipbuzz = callPackage ../tools/misc/clipbuzz { }; + xclip = callPackage ../tools/misc/xclip { }; xcur2png = callPackage ../tools/graphics/xcur2png { }; @@ -10103,6 +10216,13 @@ in inherit (darwin.apple_sdk.frameworks) IOKit; }; + # Nvidia support does not require any propietary libraries, so CI can build it. + # Note that when enabling this unconditionally, non-nvidia users will always have an empty "GPU" section. + zenith-nvidia = callPackage ../tools/system/zenith { + inherit (darwin.apple_sdk.frameworks) IOKit; + nvidiaSupport = true; + }; + zerotierone = callPackage ../tools/networking/zerotierone { }; zerofree = callPackage ../tools/filesystems/zerofree { }; @@ -10406,6 +10526,8 @@ in aliceml = callPackage ../development/compilers/aliceml { }; + armips = callPackage ../development/compilers/armips { }; + arachne-pnr = callPackage ../development/compilers/arachne-pnr { }; asciigraph = callPackage ../tools/text/asciigraph { }; @@ -10517,7 +10639,7 @@ in cmucl_binary = pkgsi686Linux.callPackage ../development/compilers/cmucl/binary.nix { }; - compcert = callPackage ../development/compilers/compcert {}; + compcert = coqPackages.compcert.override { version = "3.9"; }; computecpp-unwrapped = callPackage ../development/compilers/computecpp {}; computecpp = wrapCCWith rec { @@ -10598,6 +10720,8 @@ in fpc = callPackage ../development/compilers/fpc { }; + g203-led = callPackage ../tools/misc/g203-led { }; + gambit = callPackage ../development/compilers/gambit { }; gambit-unstable = callPackage ../development/compilers/gambit/unstable.nix { }; gambit-support = callPackage ../development/compilers/gambit/gambit-support.nix { }; @@ -11097,8 +11221,6 @@ in fsharp = callPackage ../development/compilers/fsharp { }; - fsharp41 = callPackage ../development/compilers/fsharp41 { }; - fstar = callPackage ../development/compilers/fstar { ocamlPackages = ocaml-ng.ocamlPackages_4_07; }; @@ -11147,6 +11269,10 @@ in gprolog = callPackage ../development/compilers/gprolog { }; + gwe = callPackage ../tools/misc/gwe { + nvidia_x11 = linuxPackages.nvidia_x11; + }; + gwt240 = callPackage ../development/compilers/gwt/2.4.0.nix { }; idrisPackages = dontRecurseIntoAttrs (callPackage ../development/idris-modules { @@ -11451,15 +11577,17 @@ in llvm_5 = llvmPackages_5.llvm; llvmPackages = let + latest_version = lib.toInt + (lib.versions.major llvmPackages_latest.llvm.version); # This returns the minimum supported version for the platform. The # assumption is that or any later version is good. choose = platform: /**/ if platform.isDarwin then (if platform.isAarch64 then 11 else 7) else if platform.isFreeBSD then 7 else if platform.isAndroid then 12 - else if platform.isLinux then (if platform.isRiscV then 9 else 7) + else if platform.isLinux then (if platform.isRiscV then 11 else 7) else if platform.isWasm then 8 - else 11; # latest + else latest_version; # We take the "max of the mins". Why? Since those are lower bounds of the # supported version set, this is like intersecting those sets and then # taking the min bound of that. @@ -11519,7 +11647,7 @@ in stdenv = gcc7Stdenv; })); - llvmPackages_latest = llvmPackages_11; + llvmPackages_latest = llvmPackages_12; llvmPackages_rocm = recurseIntoAttrs (callPackage ../development/compilers/llvm/rocm { }); @@ -11733,7 +11861,7 @@ in }; rust_1_52 = callPackage ../development/compilers/rust/1_52.nix { inherit (darwin.apple_sdk.frameworks) CoreFoundation Security; - llvm_11 = llvmPackages_11.libllvm; + llvm_12 = llvmPackages_12.libllvm; }; rust = rust_1_52; @@ -11836,6 +11964,7 @@ in cargo-make = callPackage ../development/tools/rust/cargo-make { inherit (darwin.apple_sdk.frameworks) Security SystemConfiguration; }; + cargo-modules = callPackage ../development/tools/rust/cargo-modules { }; cargo-msrv = callPackage ../development/tools/rust/cargo-msrv { inherit (darwin.apple_sdk.frameworks) Security; }; @@ -11847,7 +11976,7 @@ in cargo-sweep = callPackage ../development/tools/rust/cargo-sweep { }; cargo-sync-readme = callPackage ../development/tools/rust/cargo-sync-readme {}; cargo-udeps = callPackage ../development/tools/rust/cargo-udeps { - inherit (darwin.apple_sdk.frameworks) CoreServices Security; + inherit (darwin.apple_sdk.frameworks) CoreServices Security SystemConfiguration; }; cargo-valgrind = callPackage ../development/tools/rust/cargo-valgrind { }; cargo-watch = callPackage ../development/tools/rust/cargo-watch { @@ -11913,6 +12042,10 @@ in scala_2_13 = callPackage ../development/compilers/scala/2.x.nix { majorVersion = "2.13"; jre = jdk8; }; scala = scala_2_13; + scala-runners = callPackage ../development/compilers/scala-runners/default.nix { + coursier = coursier.override { jre = jdk8; }; + jre = jdk8; + }; metal = callPackage ../development/libraries/metal { }; metals = callPackage ../development/tools/metals { }; @@ -11922,6 +12055,8 @@ in }; scalafmt = callPackage ../development/tools/scalafmt { }; + scryer-prolog = callPackage ../development/compilers/scryer-prolog { }; + sdcc = callPackage ../development/compilers/sdcc { gputils = null; }; @@ -11934,8 +12069,11 @@ in shmig = callPackage ../development/tools/database/shmig { }; + # smlnjBootstrap should be redundant, now that smlnj works on Darwin natively smlnjBootstrap = callPackage ../development/compilers/smlnj/bootstrap.nix { }; - smlnj = callPackage ../development/compilers/smlnj { }; + smlnj = callPackage ../development/compilers/smlnj { + inherit (darwin) Libsystem; + }; smlpkg = callPackage ../tools/package-management/smlpkg { }; @@ -11953,6 +12091,8 @@ in jdk = oraclejdk; }; + sqlfluff = callPackage ../development/tools/database/sqlfluff { }; + sqlx-cli = callPackage ../development/tools/rust/sqlx-cli { inherit (darwin.apple_sdk.frameworks) SystemConfiguration CoreFoundation Security; }; @@ -11980,8 +12120,7 @@ in tbb = callPackage ../development/libraries/tbb { }; terra = callPackage ../development/compilers/terra { - llvmPackages = llvmPackages_6; - lua = lua5_1; + llvmPackages = llvmPackages_10; }; teyjus = callPackage ../development/compilers/teyjus ( @@ -12018,9 +12157,7 @@ in vala-lint = callPackage ../development/tools/vala-lint { }; inherit (callPackage ../development/compilers/vala { }) - vala_0_36 vala_0_40 - vala_0_44 vala_0_46 vala_0_48 vala_0_50 @@ -12304,6 +12441,8 @@ in overridePlatforms = ["x86_64-linux" "x86_64-darwin"]; }; + octave-kernel = callPackage ../applications/editors/jupyter-kernels/octave { }; + octavePackages = recurseIntoAttrs octave.pkgs; ocropus = callPackage ../applications/misc/ocropus { }; @@ -12541,6 +12680,8 @@ in scheme48 = callPackage ../development/interpreters/scheme48 { }; + scheme-bytestructures = callPackage ../development/scheme-modules/scheme-bytestructures { }; + self = pkgsi686Linux.callPackage ../development/interpreters/self { }; spark = callPackage ../applications/networking/cluster/spark { }; @@ -12571,6 +12712,8 @@ in wasm = ocamlPackages.wasm; + wasm3 = callPackage ../development/interpreters/wasm3 { }; + proglodyte-wasm = callPackage ../development/interpreters/proglodyte-wasm { }; @@ -12615,12 +12758,18 @@ in guile-fibers = callPackage ../development/guile-modules/guile-fibers { }; + guile-gcrypt = callPackage ../development/guile-modules/guile-gcrypt { }; + + guile-git = callPackage ../development/guile-modules/guile-git { }; + guile-gnome = callPackage ../development/guile-modules/guile-gnome { gconf = gnome2.GConf; guile = guile_2_0; inherit (gnome2) gnome_vfs libglade libgnome libgnomecanvas libgnomeui; }; + guile-json = callPackage ../development/guile-modules/guile-json { }; + guile-lib = callPackage ../development/guile-modules/guile-lib { }; guile-ncurses = callPackage ../development/guile-modules/guile-ncurses { }; @@ -12633,6 +12782,8 @@ in guile-sdl2 = callPackage ../development/guile-modules/guile-sdl2 { }; + guile-ssh = callPackage ../development/guile-modules/guile-ssh { }; + guile-xcb = callPackage ../development/guile-modules/guile-xcb { guile = guile_2_0; }; @@ -12644,6 +12795,8 @@ in inav-blackbox-tools = callPackage ../tools/misc/inav-blackbox-tools { }; + infracost = callPackage ../tools/misc/infracost { }; + msp430GccSupport = callPackage ../development/misc/msp430/gcc-support.nix { }; msp430Newlib = callPackage ../development/misc/msp430/newlib.nix { }; @@ -12671,6 +12824,8 @@ in pharo-spur64 = assert stdenv.is64bit; pharo-vms.spur64; pharo-launcher = callPackage ../development/pharo/launcher { }; + protege-distribution = callPackage ../development/web/protege-distribution { }; + umr = callPackage ../development/misc/umr { llvmPackages = llvmPackages_latest; }; @@ -12683,6 +12838,7 @@ in xidel = callPackage ../tools/text/xidel { }; + asdf-vm = callPackage ../tools/misc/asdf-vm { }; ### DEVELOPMENT / TOOLS @@ -12714,7 +12870,7 @@ in ansible-lint = with python3.pkgs; toPythonApplication ansible-lint; - antlr = callPackage ../development/tools/parsing/antlr/2.7.7.nix { + antlr2 = callPackage ../development/tools/parsing/antlr/2.7.7.nix { jdk = jdk8; # todo: remove override https://github.com/nixos/nixpkgs/pull/89731 }; @@ -12732,6 +12888,8 @@ in antlr4 = antlr4_8; + antlr = antlr4; + apacheAnt = callPackage ../development/tools/build-managers/apache-ant { }; apacheAnt_1_9 = callPackage ../development/tools/build-managers/apache-ant/1.9.nix { }; ant = apacheAnt; @@ -13260,6 +13418,8 @@ in effitask = callPackage ../applications/misc/effitask { }; + efm-langserver = callPackage ../development/tools/efm-langserver { }; + egypt = callPackage ../development/tools/analysis/egypt { }; elfinfo = callPackage ../development/tools/misc/elfinfo { }; @@ -13317,6 +13477,8 @@ in autoreconfHook = buildPackages.autoreconfHook269; }; + fsearch = callPackage ../tools/misc/fsearch { }; + fujprog = callPackage ../development/tools/misc/fujprog { inherit (darwin.apple_sdk.frameworks) IOKit; }; @@ -13590,6 +13752,8 @@ in litecli = callPackage ../development/tools/database/litecli {}; + litestream = callPackage ../development/tools/database/litestream {}; + lsof = callPackage ../development/tools/misc/lsof { }; ltrace = callPackage ../development/tools/misc/ltrace { }; @@ -13607,6 +13771,8 @@ in massif-visualizer = libsForQt5.callPackage ../development/tools/analysis/massif-visualizer { }; + mastodon-archive = callPackage ../tools/backup/mastodon-archive { }; + maven = maven3; maven3 = callPackage ../development/tools/build-managers/apache-maven { }; @@ -13740,6 +13906,8 @@ in phantomjs2 = libsForQt514.callPackage ../development/tools/phantomjs2 { }; + picotool = callPackage ../development/tools/picotool { }; + pmccabe = callPackage ../development/tools/misc/pmccabe { }; pkgconf-unwrapped = callPackage ../development/tools/misc/pkgconf {}; @@ -13785,6 +13953,8 @@ in premake = premake4; + privacyidea = callPackage ../applications/misc/privacyidea { }; + procodile = callPackage ../tools/system/procodile { }; pry = callPackage ../development/tools/pry { }; @@ -13797,6 +13967,8 @@ in pyrseas = callPackage ../development/tools/database/pyrseas { }; + pycritty = with python3Packages; toPythonApplication pycritty; + qtcreator = libsForQt5.callPackage ../development/tools/qtcreator { }; qxmledit = libsForQt5.callPackage ../applications/editors/qxmledit {} ; @@ -13992,6 +14164,8 @@ in strace = callPackage ../development/tools/misc/strace { }; + stylua = callPackage ../development/tools/stylua { }; + summon = callPackage ../development/tools/summon { }; svlint = callPackage ../development/tools/analysis/svlint { }; @@ -14002,6 +14176,8 @@ in swiftformat = callPackage ../development/tools/swiftformat { }; + symfony-cli = callPackage ../development/tools/symfony-cli { }; + swiftshader = callPackage ../development/libraries/swiftshader { }; systemfd = callPackage ../development/tools/systemfd { }; @@ -14013,6 +14189,8 @@ in swig = swig3; swigWithJava = swig; + c2ffi = callPackage ../development/tools/misc/c2ffi { }; + swfmill = callPackage ../tools/video/swfmill { }; swftools = callPackage ../tools/video/swftools { @@ -14406,6 +14584,8 @@ in boost_process = callPackage ../development/libraries/boost-process { }; + bosh-cli = callPackage ../applications/networking/cluster/bosh-cli { }; + botan = callPackage ../development/libraries/botan { openssl = openssl_1_0_2; inherit (darwin.apple_sdk.frameworks) CoreServices Security; @@ -14646,7 +14826,7 @@ in dbus-sharp-glib-1_0 = callPackage ../development/libraries/dbus-sharp-glib/dbus-sharp-glib-1.0.nix { }; dbus-sharp-glib-2_0 = callPackage ../development/libraries/dbus-sharp-glib { }; - makeDBusConf = { suidHelper, serviceDirectories, apparmor }: + makeDBusConf = { suidHelper, serviceDirectories, apparmor ? "disabled" }: callPackage ../development/libraries/dbus/make-dbus-conf.nix { inherit suidHelper serviceDirectories apparmor; }; @@ -14696,6 +14876,8 @@ in vdpauinfo; }; + drogon = callPackage ../development/libraries/drogon { }; + dssi = callPackage ../development/libraries/dssi {}; duckdb = callPackage ../development/libraries/duckdb {}; @@ -14980,7 +15162,9 @@ in gdal_2 = callPackage ../development/libraries/gdal/2.4.nix { }; - gdcm = callPackage ../development/libraries/gdcm { }; + gdcm = callPackage ../development/libraries/gdcm { + inherit (darwin.apple_sdk.frameworks) ApplicationServices Cocoa; + }; ggz_base_libs = callPackage ../development/libraries/ggz_base_libs {}; @@ -15210,6 +15394,8 @@ in qtstyleplugin-kvantum-qt4 = callPackage ../development/libraries/qtstyleplugin-kvantum-qt4 { }; + qxmpp = libsForQt5.callPackage ../development/libraries/qxmpp {}; + gnet = callPackage ../development/libraries/gnet { }; gnu-config = callPackage ../development/libraries/gnu-config { }; @@ -15570,6 +15756,8 @@ in id3lib = callPackage ../development/libraries/id3lib { }; + idasen = with python3Packages; toPythonApplication idasen; + ilbc = callPackage ../development/libraries/ilbc { }; ilixi = callPackage ../development/libraries/ilixi { }; @@ -15677,6 +15865,8 @@ in jsonnet-bundler = callPackage ../development/tools/jsonnet-bundler { }; + jrsonnet = callPackage ../development/compilers/jrsonnet { }; + go-jsonnet = callPackage ../development/compilers/go-jsonnet { }; jsonrpc-glib = callPackage ../development/libraries/jsonrpc-glib { }; @@ -15836,6 +16026,8 @@ in libbass = (callPackage ../development/libraries/audio/libbass { }).bass; libbass_fx = (callPackage ../development/libraries/audio/libbass { }).bass_fx; + libbencodetools = callPackage ../development/libraries/libbencodetools { }; + libbluedevil = callPackage ../development/libraries/libbluedevil { }; libbdplus = callPackage ../development/libraries/libbdplus { }; @@ -15886,7 +16078,7 @@ in libcec_platform = callPackage ../development/libraries/libcec/platform.nix { }; - libcef = callPackage ../development/libraries/libcef { inherit (gnome2) GConf; }; + libcef = callPackage ../development/libraries/libcef {}; libcello = callPackage ../development/libraries/libcello {}; @@ -16086,6 +16278,8 @@ in libfprint-2-tod1-goodix = callPackage ../development/libraries/libfprint-2-tod1-goodix { }; + libfprint-2-tod1-vfs0090 = callPackage ../development/libraries/libfprint-2-tod1-vfs0090 { }; + libfpx = callPackage ../development/libraries/libfpx { }; libgadu = callPackage ../development/libraries/libgadu { }; @@ -16143,6 +16337,8 @@ in libsecret = callPackage ../development/libraries/libsecret { }; + libserdes = callPackage ../development/libraries/libserdes { }; + libserialport = callPackage ../development/libraries/libserialport { }; libsignal-protocol-c = callPackage ../development/libraries/libsignal-protocol-c { }; @@ -16225,7 +16421,7 @@ in libgpgerror = callPackage ../development/libraries/libgpg-error { }; - # https://github.com/gpg/libgpg-error/blob/70058cd9f944d620764e57c838209afae8a58c78/README#L118-L140 + # https://git.gnupg.org/cgi-bin/gitweb.cgi?p=libgpg-error.git;a=blob;f=README;h=fd6e1a83f55696c1f7a08f6dfca08b2d6b7617ec;hb=70058cd9f944d620764e57c838209afae8a58c78#l118 libgpgerror-gen-posix-lock-obj = libgpgerror.override { genPosixLockObjOnly = true; }; @@ -16470,6 +16666,8 @@ in libjwt = callPackage ../development/libraries/libjwt { }; + libjxl = callPackage ../development/libraries/libjxl { }; + libkate = callPackage ../development/libraries/libkate { }; libkeyfinder = callPackage ../development/libraries/libkeyfinder { }; @@ -16653,6 +16851,7 @@ in libpfm = callPackage ../development/libraries/libpfm { }; libpqxx = callPackage ../development/libraries/libpqxx { }; + libpqxx_6 = callPackage ../development/libraries/libpqxx/6.nix { }; inherit (callPackages ../development/libraries/prometheus-client-c { stdenv = gccStdenv; # Required for darwin @@ -16695,8 +16894,6 @@ in libsearpc = callPackage ../development/libraries/libsearpc { }; - libseat = callPackage ../development/libraries/libseat { }; - libsigcxx = callPackage ../development/libraries/libsigcxx { }; libsigcxx12 = callPackage ../development/libraries/libsigcxx/1.2.nix { }; @@ -16904,15 +17101,16 @@ in libvorbis = callPackage ../development/libraries/libvorbis { }; + libvori = callPackage ../development/libraries/libvori { }; + libwebcam = callPackage ../os-specific/linux/libwebcam { }; libwebp = callPackage ../development/libraries/libwebp { }; libwmf = callPackage ../development/libraries/libwmf { }; - libwnck = libwnck2; - libwnck2 = callPackage ../development/libraries/libwnck { }; - libwnck3 = callPackage ../development/libraries/libwnck/3.x.nix { }; + libwnck = callPackage ../development/libraries/libwnck { }; + libwnck2 = callPackage ../development/libraries/libwnck/2.nix { }; libwpd = callPackage ../development/libraries/libwpd { }; @@ -17114,6 +17312,8 @@ in micronucleus = callPackage ../development/tools/misc/micronucleus { }; + markdown-anki-decks = callPackage ../tools/misc/markdown-anki-decks { }; + micropython = callPackage ../development/interpreters/micropython { }; MIDIVisualizer = callPackage ../applications/audio/midi-visualizer { }; @@ -17412,7 +17612,10 @@ in openldap = callPackage ../development/libraries/openldap { }; - opencolorio = callPackage ../development/libraries/opencolorio { }; + opencolorio = callPackage ../development/libraries/opencolorio { + inherit (darwin.apple_sdk.frameworks) Carbon GLUT Cocoa; + }; + opencolorio_1 = callPackage ../development/libraries/opencolorio/1.x.nix { }; opendmarc = callPackage ../development/libraries/opendmarc { }; @@ -17512,6 +17715,8 @@ in physfs_2 physfs; + pico-sdk = callPackage ../development/libraries/pico-sdk { }; + pipelight = callPackage ../tools/misc/pipelight { stdenv = stdenv_32bit; wine-staging = pkgsi686Linux.wine-staging; @@ -17546,7 +17751,10 @@ in suffix = "min"; }; - poppler_utils = poppler.override { suffix = "utils"; utils = true; }; + poppler_utils = poppler.override { + suffix = "utils"; + utils = true; + }; popt = callPackage ../development/libraries/popt { }; @@ -17606,7 +17814,9 @@ in protozero = callPackage ../development/libraries/protozero { }; - flatbuffers = callPackage ../development/libraries/flatbuffers { }; + flatbuffers = flatbuffers_2_0; + flatbuffers_2_0 = callPackage ../development/libraries/flatbuffers/2.0.nix { }; + flatbuffers_1_12 = callPackage ../development/libraries/flatbuffers/1.12.nix { }; nanopb = callPackage ../development/libraries/nanopb { }; @@ -17837,6 +18047,8 @@ in randomx = callPackage ../development/libraries/randomx { }; + retro-gtk = callPackage ../development/libraries/retro-gtk { }; + resolv_wrapper = callPackage ../development/libraries/resolv_wrapper { }; rhino = callPackage ../development/libraries/java/rhino { @@ -18249,9 +18461,7 @@ in tcllib = callPackage ../development/libraries/tcllib { }; - tcltls = callPackage ../development/libraries/tcltls { - openssl = openssl_1_0_2; - }; + tcltls = callPackage ../development/libraries/tcltls { }; tclx = callPackage ../development/libraries/tclx { }; @@ -19096,7 +19306,10 @@ in engelsystem = callPackage ../servers/web-apps/engelsystem { php = php74; }; - envoy = callPackage ../servers/http/envoy { }; + envoy = callPackage ../servers/http/envoy { + go = go_1_15; + jdk = openjdk11; + }; etcd = callPackage ../servers/etcd { }; etcd_3_4 = callPackage ../servers/etcd/3.4.nix { }; @@ -19158,7 +19371,7 @@ in gofish = callPackage ../servers/gopher/gofish { }; grafana = callPackage ../servers/monitoring/grafana { }; - grafanaPlugins = dontRecurseIntoAttrs (callPackage ../servers/monitoring/grafana/plugins { }); + grafanaPlugins = callPackages ../servers/monitoring/grafana/plugins { }; grafana-agent = callPackage ../servers/monitoring/grafana-agent { }; @@ -19200,10 +19413,14 @@ in home-assistant-cli = callPackage ../servers/home-assistant/cli.nix { }; + hqplayerd = callPackage ../servers/hqplayerd { }; + https-dns-proxy = callPackage ../servers/dns/https-dns-proxy { }; hydron = callPackage ../servers/hydron { }; + hyprspace = callPackage ../applications/networking/hyprspace { inherit (darwin) iproute2mac; }; + icecream = callPackage ../servers/icecream { }; icingaweb2 = callPackage ../servers/icingaweb2 { }; @@ -19235,6 +19452,8 @@ in jitsi-meet = callPackage ../servers/web-apps/jitsi-meet { }; + jitsi-meet-prosody = callPackage ../misc/jitsi-meet-prosody { }; + jitsi-videobridge = callPackage ../servers/jitsi-videobridge { }; kapowbang = callPackage ../servers/kapowbang { }; @@ -19305,8 +19524,10 @@ in mod_pkcs12 = pkgs.apacheHttpdPackages.mod_pkcs12; mod_timestamp = pkgs.apacheHttpdPackages.mod_timestamp; - inherit (callPackages ../servers/mpd { stdenv = if stdenv.cc.isClang then llvmPackages_8.stdenv else stdenv; }) - mpd mpd-small mpdWithFeatures; + inherit (callPackages ../servers/mpd { + stdenv = if stdenv.cc.isClang then llvmPackages_8.stdenv else stdenv; + inherit (darwin.apple_sdk.frameworks) AudioToolbox AudioUnit; + }) mpd mpd-small mpdWithFeatures; libmpdclient = callPackage ../servers/mpd/libmpdclient.nix { }; @@ -19620,6 +19841,8 @@ in neo4j = callPackage ../servers/nosql/neo4j { }; + neo4j-desktop = callPackage ../applications/misc/neo4j-desktop { }; + check-esxi-hardware = callPackage ../servers/monitoring/plugins/esxi.nix {}; net-snmp = callPackage ../servers/monitoring/net-snmp { }; @@ -19676,6 +19899,7 @@ in postgresql_11 postgresql_12 postgresql_13 + postgresql_14 ; postgresql = postgresql_11.override { this = postgresql; }; postgresqlPackages = recurseIntoAttrs postgresql.pkgs; @@ -19729,6 +19953,7 @@ in prometheus-redis-exporter = callPackage ../servers/monitoring/prometheus/redis-exporter.nix { }; prometheus-rabbitmq-exporter = callPackage ../servers/monitoring/prometheus/rabbitmq-exporter.nix { }; prometheus-rtl_433-exporter = callPackage ../servers/monitoring/prometheus/rtl_433-exporter.nix { }; + prometheus-script-exporter = callPackage ../servers/monitoring/prometheus/script-exporter.nix { }; prometheus-smokeping-prober = callPackage ../servers/monitoring/prometheus/smokeping-prober.nix { }; prometheus-snmp-exporter = callPackage ../servers/monitoring/prometheus/snmp-exporter.nix { }; prometheus-statsd-exporter = callPackage ../servers/monitoring/prometheus/statsd-exporter.nix { }; @@ -19805,6 +20030,8 @@ in boost = boost17x; }; + roon-bridge = callPackage ../servers/roon-bridge { }; + roon-server = callPackage ../servers/roon-server { }; s6 = skawarePackages.s6; @@ -19913,9 +20140,8 @@ in trafficserver = callPackage ../servers/http/trafficserver { }; inherit (callPackages ../servers/http/tomcat { }) - tomcat7 - tomcat8 - tomcat9; + tomcat9 + tomcat10; tomcat_mysql_jdbc = callPackage ../servers/http/tomcat/jdbc/mysql { }; @@ -19925,7 +20151,6 @@ in tt-rss = callPackage ../servers/tt-rss { }; tt-rss-plugin-ff-instagram = callPackage ../servers/tt-rss/plugin-ff-instagram { }; - tt-rss-plugin-tumblr-gdpr = callPackage ../servers/tt-rss/plugin-tumblr-gdpr { }; tt-rss-plugin-auth-ldap = callPackage ../servers/tt-rss/plugin-auth-ldap { }; tt-rss-theme-feedly = callPackage ../servers/tt-rss/theme-feedly { }; @@ -20066,23 +20291,17 @@ in alertmanager-irc-relay = callPackage ../servers/monitoring/alertmanager-irc-relay { }; - alsa-firmware = callPackage ../os-specific/linux/alsa-firmware { }; - - alsaLib = callPackage ../os-specific/linux/alsa-lib { }; - - alsaPlugins = callPackage ../os-specific/linux/alsa-plugins { }; - - alsaPluginWrapper = callPackage ../os-specific/linux/alsa-plugins/wrapper.nix { }; - - alsaUtils = callPackage ../os-specific/linux/alsa-utils { + alsa-firmware = callPackage ../os-specific/linux/alsa-project/alsa-firmware { }; + alsa-lib = callPackage ../os-specific/linux/alsa-project/alsa-lib { }; + alsa-oss = callPackage ../os-specific/linux/alsa-project/alsa-oss { }; + alsa-plugins = callPackage ../os-specific/linux/alsa-project/alsa-plugins { }; + alsa-plugins-wrapper = callPackage ../os-specific/linux/alsa-project/alsa-plugins/wrapper.nix { }; + alsa-tools = callPackage ../os-specific/linux/alsa-project/alsa-tools { }; + alsa-topology-conf = callPackage ../os-specific/linux/alsa-project/alsa-topology-conf { }; + alsa-ucm-conf = callPackage ../os-specific/linux/alsa-project/alsa-ucm-conf { }; + alsa-utils = callPackage ../os-specific/linux/alsa-project/alsa-utils { fftw = fftwFloat; }; - alsaOss = callPackage ../os-specific/linux/alsa-oss { }; - alsaTools = callPackage ../os-specific/linux/alsa-tools { }; - - alsa-ucm-conf = callPackage ../os-specific/linux/alsa-ucm-conf { }; - - alsa-topology-conf = callPackage ../os-specific/linux/alsa-topology-conf { }; inherit (callPackage ../misc/arm-trusted-firmware {}) buildArmTrustedFirmware @@ -20343,6 +20562,7 @@ in iomelt = callPackage ../os-specific/linux/iomelt { }; iotop = callPackage ../os-specific/linux/iotop { }; + iotop-c = callPackage ../os-specific/linux/iotop-c { }; iproute2 = callPackage ../os-specific/linux/iproute { }; @@ -20524,6 +20744,7 @@ in kernelPatches.bridge_stp_helper kernelPatches.request_key_helper kernelPatches.rtl8761b_support + kernelPatches.rtnetlink_fix_regression_in_bridge_vlan_configuration ]; }; @@ -20538,17 +20759,19 @@ in kernelPatches = [ kernelPatches.bridge_stp_helper kernelPatches.request_key_helper - ]; - }; - - linux_5_11 = callPackage ../os-specific/linux/kernel/linux-5.11.nix { - kernelPatches = [ - kernelPatches.bridge_stp_helper - kernelPatches.request_key_helper + kernelPatches.rtnetlink_fix_regression_in_bridge_vlan_configuration ]; }; linux_5_12 = callPackage ../os-specific/linux/kernel/linux-5.12.nix { + kernelPatches = [ + kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper + kernelPatches.rtnetlink_fix_regression_in_bridge_vlan_configuration + ]; + }; + + linux_5_13 = callPackage ../os-specific/linux/kernel/linux-5.13.nix { kernelPatches = [ kernelPatches.bridge_stp_helper kernelPatches.request_key_helper @@ -20643,6 +20866,8 @@ in anbox = callPackage ../os-specific/linux/anbox/kmod.nix { }; + apfs = callPackage ../os-specific/linux/apfs { }; + batman_adv = callPackage ../os-specific/linux/batman-adv {}; bcc = callPackage ../os-specific/linux/bcc { @@ -20666,7 +20891,9 @@ in digimend = callPackage ../os-specific/linux/digimend { }; - dpdk = callPackage ../os-specific/linux/dpdk { }; + dpdk-kmods = callPackage ../os-specific/linux/dpdk-kmods { }; + + dpdk = throw "The dpdk driver has been renamed to dpdk-kmods."; exfat-nofuse = callPackage ../os-specific/linux/exfat { }; @@ -20720,6 +20947,8 @@ in r8168 = callPackage ../os-specific/linux/r8168 { }; + rtl8188eus-aircrack = callPackage ../os-specific/linux/rtl8188eus-aircrack { }; + rtl8192eu = callPackage ../os-specific/linux/rtl8192eu { }; rtl8723bs = callPackage ../os-specific/linux/rtl8723bs { }; @@ -20785,6 +21014,8 @@ in system76-acpi = callPackage ../os-specific/linux/system76-acpi { }; + system76-power = callPackage ../os-specific/linux/system76-power { }; + system76-io = callPackage ../os-specific/linux/system76-io { }; tmon = callPackage ../os-specific/linux/tmon { }; @@ -20797,6 +21028,8 @@ in v86d = callPackage ../os-specific/linux/v86d { }; + veikk-linux-driver = callPackage ../os-specific/linux/veikk-linux-driver { }; + vendor-reset = callPackage ../os-specific/linux/vendor-reset { }; vhba = callPackage ../misc/emulators/cdemu/vhba.nix { }; @@ -20859,8 +21092,8 @@ in linuxPackages_4_19 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_19); linuxPackages_5_4 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_5_4); linuxPackages_5_10 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_5_10); - linuxPackages_5_11 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_5_11); linuxPackages_5_12 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_5_12); + linuxPackages_5_13 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_5_13); # When adding to the list above: # - Update linuxPackages_latest to the latest version @@ -20893,7 +21126,7 @@ in # Hardened Linux hardenedLinuxPackagesFor = kernel': overrides: let # Note: We use this hack since the hardened patches can lag behind and we don't want to delay updates: - linux_latest_for_hardened = pkgs.linux_5_11; + linux_latest_for_hardened = pkgs.linux_5_12; kernel = (if kernel' == pkgs.linux_latest then linux_latest_for_hardened else kernel').override overrides; in linuxPackagesFor (kernel.override { structuredExtraConfig = import ../os-specific/linux/kernel/hardened/config.nix { @@ -21804,6 +22037,8 @@ in edusong = callPackage ../data/fonts/edusong { }; + efont-unicode = callPackage ../data/fonts/efont-unicode { }; + elliptic_curves = callPackage ../data/misc/elliptic_curves { }; equilux-theme = callPackage ../data/themes/equilux-theme { }; @@ -22053,6 +22288,8 @@ in materia-theme = callPackage ../data/themes/materia-theme { }; + materia-kde-theme = callPackage ../data/themes/materia-kde { }; + material-design-icons = callPackage ../data/fonts/material-design-icons { }; material-icons = callPackage ../data/fonts/material-icons { }; @@ -22099,6 +22336,8 @@ in mustache-hpp = callPackage ../development/libraries/mustache-hpp { }; + myrddin = callPackage ../development/compilers/myrddin { }; + myrica = callPackage ../data/fonts/myrica { }; nafees = callPackage ../data/fonts/nafees { }; @@ -22154,7 +22393,7 @@ in orbitron = callPackage ../data/fonts/orbitron { }; - orchis = callPackage ../data/themes/orchis { }; + orchis-theme = callPackage ../data/themes/orchis-theme { }; orion = callPackage ../data/themes/orion {}; @@ -22338,6 +22577,8 @@ in inter = callPackage ../data/fonts/inter { }; + open-fonts = callPackage ../data/fonts/open-fonts { }; + scientifica = callPackage ../data/fonts/scientifica { }; siji = callPackage ../data/fonts/siji @@ -22366,6 +22607,8 @@ in inherit (callPackages ../data/fonts/tai-languages { }) tai-ahom; + taskspooler = callPackage ../tools/system/taskspooler { }; + tamsyn = callPackage ../data/fonts/tamsyn { inherit (buildPackages.xorg) mkfontscale; }; tamzen = callPackage ../data/fonts/tamzen { inherit (buildPackages.xorg) mkfontscale; }; @@ -22407,6 +22650,8 @@ in theme-vertex = callPackage ../data/themes/vertex { }; + times-newer-roman = callPackage ../data/fonts/times-newer-roman { }; + tipa = callPackage ../data/fonts/tipa { }; ttf_bitstream_vera = callPackage ../data/fonts/ttf-bitstream-vera { }; @@ -22474,6 +22719,10 @@ in weather-icons = callPackage ../data/fonts/weather-icons { }; + whitesur-gtk-theme = callPackage ../data/themes/whitesur { }; + + whitesur-icon-theme = callPackage ../data/icons/whitesur-icon-theme { }; + wireless-regdb = callPackage ../data/misc/wireless-regdb { }; work-sans = callPackage ../data/fonts/work-sans { }; @@ -22601,6 +22850,8 @@ in antiword = callPackage ../applications/office/antiword {}; + anup = callPackage ../applications/misc/anup {}; + ao = libfive; apache-directory-studio = callPackage ../applications/networking/apache-directory-studio {}; @@ -22691,10 +22942,7 @@ in jnetmap = callPackage ../applications/networking/jnetmap {}; - libbitcoin = callPackage ../tools/misc/libbitcoin/libbitcoin.nix { - secp256k1 = secp256k1.override { enableECDH = true; }; - }; - + libbitcoin = callPackage ../tools/misc/libbitcoin/libbitcoin.nix { }; libbitcoin-protocol = callPackage ../tools/misc/libbitcoin/libbitcoin-protocol.nix { }; libbitcoin-client = callPackage ../tools/misc/libbitcoin/libbitcoin-client.nix { }; libbitcoin-network = callPackage ../tools/misc/libbitcoin/libbitcoin-network.nix { }; @@ -23290,6 +23538,8 @@ in edbrowse = callPackage ../applications/editors/edbrowse { }; + oed = callPackage ../applications/editors/oed { }; + ekho = callPackage ../applications/audio/ekho { }; electron-cash = libsForQt5.callPackage ../applications/misc/electron-cash { }; @@ -23320,10 +23570,11 @@ in libXaw = xorg.libXaw; Xaw3d = null; gconf = null; - alsaLib = null; + alsa-lib = null; acl = null; gpm = null; inherit (darwin.apple_sdk.frameworks) AppKit GSS ImageIO; + inherit (darwin) sigtool; }; emacs27-nox = lowPrio (appendToName "nox" (emacs27.override { @@ -24158,7 +24409,7 @@ in gv = callPackage ../applications/misc/gv { }; gvisor = callPackage ../applications/virtualization/gvisor { - go = go_1_14; + go = go_1_16; }; gvisor-containerd-shim = callPackage ../applications/virtualization/gvisor/containerd-shim.nix { }; @@ -24537,6 +24788,8 @@ in inherit (darwin.apple_sdk.frameworks) ApplicationServices Foundation; }); + imagination = callPackage ../applications/video/imagination { }; + inherit (nodePackages) imapnotify; img2pdf = with python3Packages; toPythonApplication img2pdf; @@ -24681,6 +24934,8 @@ in kbibtex = libsForQt5.callPackage ../applications/office/kbibtex { }; + kaidan = libsForQt5.callPackage ../applications/networking/instant-messengers/kaidan { }; + kdeltachat = libsForQt5.callPackage ../applications/networking/instant-messengers/kdeltachat { }; kdevelop-pg-qt = libsForQt5.callPackage ../applications/editors/kdevelop5/kdevelop-pg-qt.nix { }; @@ -24778,6 +25033,8 @@ in kubectl = callPackage ../applications/networking/cluster/kubectl { }; + kubebuilder = callPackage ../applications/networking/cluster/kubebuilder { }; + kuttl = callPackage ../applications/networking/cluster/kuttl { buildGoModule = buildGo115Module; }; @@ -24804,7 +25061,9 @@ in fluxcd = callPackage ../applications/networking/cluster/fluxcd { }; - linkerd = callPackage ../applications/networking/cluster/linkerd { }; + linkerd_stable = (callPackage ../applications/networking/cluster/linkerd { }).stable; + linkerd_edge = (callPackage ../applications/networking/cluster/linkerd { }).edge; + linkerd = linkerd_edge; kile-wl = callPackage ../applications/misc/kile-wl { }; @@ -25448,6 +25707,8 @@ in nwg-launchers = callPackage ../applications/misc/nwg-launchers { }; + nwg-menu = callPackage ../applications/misc/nwg-menu { }; + ocenaudio = callPackage ../applications/audio/ocenaudio { }; onlyoffice-bin = callPackage ../applications/office/onlyoffice-bin { }; @@ -25637,6 +25898,8 @@ in mlocate = callPackage ../tools/misc/mlocate { }; + plocate = callPackage ../tools/misc/plocate { }; + mypaint = callPackage ../applications/graphics/mypaint { }; mypaint-brushes1 = callPackage ../development/libraries/mypaint-brushes/1.0.nix { }; @@ -25657,8 +25920,6 @@ in navipowm = callPackage ../applications/misc/navipowm { }; - navit = libsForQt5.callPackage ../applications/misc/navit { }; - netbeans = callPackage ../applications/editors/netbeans { jdk = jdk11; }; @@ -25721,19 +25982,9 @@ in oberon-risc-emu = callPackage ../misc/emulators/oberon-risc-emu { }; - obs-studio = libsForQt5.callPackage ../applications/video/obs-studio { }; - - obs-wlrobs = callPackage ../applications/video/obs-studio/wlrobs.nix { }; - - obs-gstreamer = callPackage ../applications/video/obs-studio/obs-gstreamer.nix { }; - - obs-move-transition = callPackage ../applications/video/obs-studio/obs-move-transition.nix { }; - - obs-multi-rtmp = libsForQt5.callPackage ../applications/video/obs-studio/obs-multi-rtmp.nix { }; - - obs-v4l2sink = libsForQt5.callPackage ../applications/video/obs-studio/v4l2sink.nix { }; - - obs-ndi = libsForQt5.callPackage ../applications/video/obs-studio/obs-ndi.nix { }; + obs-studio = libsForQt5.callPackage ../applications/video/obs-studio {}; + obs-studio-plugins = callPackage ../applications/video/obs-studio/plugins {}; + wrapOBS = callPackage ../applications/video/obs-studio/wrapper.nix {}; obsidian = callPackage ../applications/misc/obsidian { }; @@ -26045,6 +26296,8 @@ in pommed_light = callPackage ../os-specific/linux/pommed-light {}; + polylith = callPackage ../development/tools/misc/polylith { }; + polymake = callPackage ../applications/science/math/polymake { openjdk = openjdk8; # TODO: remove override https://github.com/NixOS/nixpkgs/pull/89731 }; @@ -26417,7 +26670,7 @@ in scite = callPackage ../applications/editors/scite { }; - scli = with python3Packages; callPackage ../applications/misc/scli { }; + scli = callPackage ../applications/misc/scli { }; scribus = callPackage ../applications/office/scribus { inherit (gnome2) libart_lgpl; @@ -26427,6 +26680,8 @@ in seafile-client = libsForQt5.callPackage ../applications/networking/seafile-client { }; + seatd = callPackage ../applications/misc/seatd { }; + secretscanner = callPackage ../tools/security/secretscanner { }; semiphemeral = callPackage ../tools/misc/semiphemeral { }; @@ -26729,6 +26984,10 @@ in git = gitMinimal; }; + survex = callPackage ../applications/misc/survex { + inherit (darwin.apple_sdk.frameworks) Carbon Cocoa; + }; + sunvox = callPackage ../applications/audio/sunvox { }; svkbd = callPackage ../applications/accessibility/svkbd { }; @@ -26958,6 +27217,8 @@ in tortoisehg = callPackage ../applications/version-management/tortoisehg { }; + tonelib-gfx = callPackage ../applications/audio/tonelib-gfx { }; + tony = libsForQt514.callPackage ../applications/audio/tony { }; toot = callPackage ../applications/misc/toot { }; @@ -27012,6 +27273,8 @@ in tudu = callPackage ../applications/office/tudu { }; + tuna = python3Packages.callPackage ../os-specific/linux/tuna { }; + tunefish = callPackage ../applications/audio/tunefish { stdenv = clangStdenv; # https://github.com/jpcima/tunefish/issues/4 }; @@ -27061,7 +27324,6 @@ in unipicker = callPackage ../applications/misc/unipicker { }; unison = callPackage ../applications/networking/sync/unison { - ocamlPackages = ocaml-ng.ocamlPackages_4_09; enableX11 = config.unison.enableX11 or true; }; @@ -27103,6 +27365,8 @@ in inherit (gnome2) libgnomeui; }; + veusz = libsForQt5.callPackage ../applications/graphics/veusz { }; + vim = callPackage ../applications/editors/vim { inherit (darwin.apple_sdk.frameworks) Carbon Cocoa; }; @@ -27885,11 +28149,11 @@ in ytmdesktop = callPackage ../applications/audio/ytmdesktop { }; + ytmdl = python3Packages.callPackage ../tools/misc/ytmdl { }; + zam-plugins = callPackage ../applications/audio/zam-plugins { }; - zanshin = libsForQt5.callPackage ../applications/office/zanshin { - boost = boost160; - }; + zanshin = libsForQt5.callPackage ../applications/office/zanshin { }; zathura = callPackage ../applications/misc/zathura { }; @@ -28035,11 +28299,17 @@ in ledger-live-desktop = callPackage ../applications/blockchains/ledger-live-desktop { }; + lightning-loop = callPackage ../applications/blockchains/lightning-loop { }; + + lightning-pool = callPackage ../applications/blockchains/lightning-pool { }; + litecoin = libsForQt514.callPackage ../applications/blockchains/litecoin.nix { inherit (darwin.apple_sdk.frameworks) AppKit; }; litecoind = litecoin.override { withGui = false; }; + livedl = callPackage ../tools/misc/livedl { }; + lnd = callPackage ../applications/blockchains/lnd.nix { }; lndconnect = callPackage ../applications/blockchains/lndconnect { }; @@ -28093,7 +28363,7 @@ in zcash = callPackage ../applications/blockchains/zcash { stdenv = llvmPackages_11.stdenv; }; - openethereum = callPackage ../applications/blockchains/openethereum { stdenv = llvmPackages_12.stdenv; }; + openethereum = callPackage ../applications/blockchains/openethereum { }; parity-ui = callPackage ../applications/blockchains/parity-ui { }; @@ -29386,9 +29656,7 @@ in migrate = callPackage ../applications/science/biology/migrate { }; - minia = callPackage ../applications/science/biology/minia { - boost = boost159; - }; + minia = callPackage ../applications/science/biology/minia { }; mirtk = callPackage ../development/libraries/science/biology/mirtk { }; @@ -29510,6 +29778,8 @@ in ### SCIENCE/MATH + _4ti2 = callPackage ../applications/science/math/4ti2 { }; + almonds = callPackage ../applications/science/math/almonds { }; amd-blis = callPackage ../development/libraries/science/math/amd-blis { }; @@ -29688,6 +29958,11 @@ in elmerfem = callPackage ../applications/science/physics/elmerfem {}; + mcfm = callPackage ../applications/science/physics/MCFM { + stdenv = gccStdenv; + lhapdf = lhapdf.override { stdenv = gccStdenv; }; + }; + professor = callPackage ../applications/science/physics/professor { }; sacrifice = callPackage ../applications/science/physics/sacrifice {}; @@ -29808,11 +30083,7 @@ in iprover = callPackage ../applications/science/logic/iprover { }; - jonprl = callPackage ../applications/science/logic/jonprl { - smlnj = if stdenv.isDarwin - then smlnjBootstrap - else smlnj; - }; + jonprl = callPackage ../applications/science/logic/jonprl { }; key = callPackage ../applications/science/logic/key { }; @@ -29871,19 +30142,11 @@ in tptp = callPackage ../applications/science/logic/tptp {}; - celf = callPackage ../applications/science/logic/celf { - smlnj = if stdenv.isDarwin - then smlnjBootstrap - else smlnj; - }; + celf = callPackage ../applications/science/logic/celf { }; fast-downward = callPackage ../applications/science/logic/fast-downward { }; - twelf = callPackage ../applications/science/logic/twelf { - smlnj = if stdenv.isDarwin - then smlnjBootstrap - else smlnj; - }; + twelf = callPackage ../applications/science/logic/twelf { }; verifast = callPackage ../applications/science/logic/verifast {}; @@ -30021,10 +30284,7 @@ in ecm = callPackage ../applications/science/math/ecm { }; - eukleides = callPackage ../applications/science/math/eukleides { - texLive = texlive.combine { inherit (texlive) scheme-small; }; - texinfo = texinfo4; - }; + eukleides = callPackage ../applications/science/math/eukleides { }; form = callPackage ../applications/science/math/form { }; @@ -30066,6 +30326,8 @@ in pcalc = callPackage ../applications/science/math/pcalc { }; + programmer-calculator = callPackage ../applications/science/math/programmer-calculator { }; + bcal = callPackage ../applications/science/math/bcal { }; pspp = callPackage ../applications/science/math/pspp { }; @@ -30202,7 +30464,9 @@ in herwig = callPackage ../development/libraries/physics/herwig { }; - lhapdf = callPackage ../development/libraries/physics/lhapdf { }; + lhapdf = callPackage ../development/libraries/physics/lhapdf { + python = python3; + }; mela = callPackage ../development/libraries/physics/mela { }; @@ -30234,6 +30498,8 @@ in betaflight-configurator = callPackage ../applications/science/robotics/betaflight-configurator { }; + emuflight-configurator = callPackage ../applications/science/robotics/emuflight-configurator { }; + mission-planner = callPackage ../applications/science/robotics/mission-planner { }; ### MISC @@ -30298,6 +30564,8 @@ in cups-kyocera = callPackage ../misc/cups/drivers/kyocera {}; + cups-kyocera-ecosys-m552x-p502x = callPackage ../misc/cups/drivers/kyocera-ecosys-m552x-p502x {}; + cups-kyodialog3 = callPackage ../misc/cups/drivers/kyodialog3 {}; cups-dymo = callPackage ../misc/cups/drivers/dymo {}; @@ -30489,10 +30757,6 @@ in hplipWithPlugin_3_16_11 = hplip_3_16_11.override { withPlugin = true; }; - hplip_3_18_5 = callPackage ../misc/drivers/hplip/3.18.5.nix { }; - - hplipWithPlugin_3_18_5 = hplip_3_18_5.override { withPlugin = true; }; - hyperfine = callPackage ../tools/misc/hyperfine { inherit (darwin.apple_sdk.frameworks) Security; }; @@ -30513,6 +30777,8 @@ in idsk = callPackage ../tools/filesystems/idsk { }; + lima = callPackage ../applications/virtualization/lima {}; + logtop = callPackage ../tools/misc/logtop { }; igraph = callPackage ../development/libraries/igraph { }; @@ -30538,6 +30804,8 @@ in j2cli = with python3Packages; toPythonApplication j2cli; + jquake = callPackage ../applications/misc/jquake { }; + jstest-gtk = callPackage ../tools/misc/jstest-gtk { }; keynav = callPackage ../tools/X11/keynav { }; @@ -30784,7 +31052,7 @@ in inherit (darwin.apple_sdk.frameworks) Security; }; - nix-linter = haskell.lib.justStaticExecutables (haskellPackages.callPackage ../development/tools/analysis/nix-linter { }); + nix-linter = haskell.lib.justStaticExecutables (haskellPackages.nix-linter); nix-pin = callPackage ../tools/package-management/nix-pin { }; @@ -31059,6 +31327,9 @@ in mfcl8690cdwcupswrapper = callPackage ../misc/cups/drivers/mfcl8690cdwcupswrapper { }; mfcl8690cdwlpr = callPackage ../misc/cups/drivers/mfcl8690cdwlpr { }; + mfc9140cdncupswrapper = callPackage ../misc/cups/drivers/mfc9140cdncupswrapper { }; + mfc9140cdnlpr = callPackage ../misc/cups/drivers/mfc9140cdnlpr { }; + samsung-unified-linux-driver_1_00_36 = callPackage ../misc/cups/drivers/samsung/1.00.36/default.nix { }; samsung-unified-linux-driver_1_00_37 = callPackage ../misc/cups/drivers/samsung/1.00.37.nix { }; samsung-unified-linux-driver_4_00_39 = callPackage ../misc/cups/drivers/samsung/4.00.39 { }; @@ -31159,14 +31430,16 @@ in termpdfpy = python3Packages.callPackage ../applications/misc/termpdf.py {}; inherit (callPackage ../applications/networking/cluster/terraform { }) + mkTerraform terraform_0_12 terraform_0_13 terraform_0_14 terraform_0_15 + terraform_1_0 terraform_plugins_test ; - terraform = terraform_0_12; + terraform = terraform_1_0; # deprecated terraform-full = terraform.full; @@ -31243,6 +31516,8 @@ in urbit = callPackage ../misc/urbit { }; + usql = callPackage ../applications/misc/usql { }; + utf8cpp = callPackage ../development/libraries/utf8cpp { }; utf8proc = callPackage ../development/libraries/utf8proc { }; @@ -31257,10 +31532,14 @@ in vaultenv = haskellPackages.vaultenv; + vazir-code-font = callPackage ../data/fonts/vazir-code-font { }; + vazir-fonts = callPackage ../data/fonts/vazir-fonts { }; vbam = callPackage ../misc/emulators/vbam { }; + vgmstream = callPackage ../applications/audio/vgmstream { }; + vice = callPackage ../misc/emulators/vice { }; ViennaRNA = callPackage ../applications/science/molecular-dynamics/viennarna { }; @@ -31507,8 +31786,12 @@ in yapesdl = callPackage ../misc/emulators/yapesdl { }; - x16-emulator = callPackage ../misc/emulators/commander-x16/emulator.nix { }; - x16-rom = callPackage ../misc/emulators/commander-x16/rom.nix { }; + x16-emulator = callPackage ../misc/emulators/commanderx16/emulator.nix { }; + x16-rom = callPackage ../misc/emulators/commanderx16/rom.nix { }; + x16-run = (callPackage ../misc/emulators/commanderx16/run.nix { }) { + emulator = x16-emulator; + rom = x16-rom; + }; bullet = callPackage ../development/libraries/bullet { inherit (darwin.apple_sdk.frameworks) Cocoa OpenGL; @@ -31825,6 +32108,8 @@ in xcolor = callPackage ../tools/graphics/xcolor { }; + xcfun = callPackage ../development/libraries/science/chemistry/xcfun { }; + zthrottle = callPackage ../tools/misc/zthrottle { }; zktree = callPackage ../applications/misc/zktree {}; diff --git a/third_party/nixpkgs/pkgs/top-level/coq-packages.nix b/third_party/nixpkgs/pkgs/top-level/coq-packages.nix index bd957bdb49..fb7e211301 100644 --- a/third_party/nixpkgs/pkgs/top-level/coq-packages.nix +++ b/third_party/nixpkgs/pkgs/top-level/coq-packages.nix @@ -1,5 +1,5 @@ -{ lib, callPackage, newScope, recurseIntoAttrs, ocamlPackages_4_05, ocamlPackages_4_09 -, ocamlPackages_4_10, compcert +{ lib, stdenv, callPackage, newScope, recurseIntoAttrs, ocamlPackages_4_05, ocamlPackages_4_09 +, ocamlPackages_4_10, fetchpatch, makeWrapper, coq2html }@args: let lib = import ../build-support/coq/extra-lib.nix {inherit (args) lib;}; in let @@ -21,6 +21,10 @@ let category-theory = callPackage ../development/coq-modules/category-theory { }; Cheerios = callPackage ../development/coq-modules/Cheerios {}; CoLoR = callPackage ../development/coq-modules/CoLoR {}; + compcert = callPackage ../development/coq-modules/compcert { + ocamlPackages = ocamlPackages_4_05; + inherit fetchpatch makeWrapper coq2html lib stdenv; + }; coq-bits = callPackage ../development/coq-modules/coq-bits {}; coq-elpi = callPackage ../development/coq-modules/coq-elpi {}; coq-ext-lib = callPackage ../development/coq-modules/coq-ext-lib {}; @@ -69,6 +73,7 @@ let paramcoq = callPackage ../development/coq-modules/paramcoq {}; pocklington = callPackage ../development/coq-modules/pocklington {}; QuickChick = callPackage ../development/coq-modules/QuickChick {}; + reglang = callPackage ../development/coq-modules/reglang {}; relation-algebra = callPackage ../development/coq-modules/relation-algebra {}; simple-io = callPackage ../development/coq-modules/simple-io { }; stdpp = callPackage ../development/coq-modules/stdpp { }; @@ -77,11 +82,7 @@ let topology = callPackage ../development/coq-modules/topology {}; Velisarios = callPackage ../development/coq-modules/Velisarios {}; Verdi = callPackage ../development/coq-modules/Verdi {}; - VST = callPackage ../development/coq-modules/VST (with lib.versions; - lib.switch coq.coq-version [ - { case = "8.11"; out = { compcert = compcert.override { coqPackages = self; version = "3.7"; }; }; } - { case = range "8.12" "8.13"; out = { compcert = compcert.override { coqPackages = self; version = "3.8"; }; }; } - ] {}); + VST = callPackage ../development/coq-modules/VST {}; zorns-lemma = callPackage ../development/coq-modules/zorns-lemma {}; filterPackages = doesFilter: if doesFilter then filterCoqPackages self else self; }; diff --git a/third_party/nixpkgs/pkgs/top-level/dotnet-packages.nix b/third_party/nixpkgs/pkgs/top-level/dotnet-packages.nix index b26dd1b1e5..6a189c0005 100644 --- a/third_party/nixpkgs/pkgs/top-level/dotnet-packages.nix +++ b/third_party/nixpkgs/pkgs/top-level/dotnet-packages.nix @@ -8,7 +8,6 @@ , glib , pkg-config , mono -, fsharp , overrides ? {} }: @@ -16,169 +15,6 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; { # BINARY PACKAGES - Autofac = fetchNuGet { - baseName = "Autofac"; - version = "3.5.2"; - sha256 = "194cs8ybn5xjqnzy643w5i62m0d5s34d3nshwxp2v4fcb94wa4ri"; - outputFiles = [ "lib/portable-net4+sl5+netcore45+wpa81+wp8+MonoAndroid1+MonoTouch1/*" ]; - }; - - Fake = fetchNuGet { - baseName = "FAKE"; - version = "3.33.0"; - sha256 = "04gllx9d1w8zn9gq9p5k76b79ix07rilk3apdi72dmz6h3yylcdm"; - outputFiles = [ "tools/*" ]; - dllFiles = [ "Fake*.dll" ]; - }; - - Fantomas = fetchNuGet { - baseName = "Fantomas"; - version = "4.4.0"; - sha256 = "cYz0ewJdK9nRlMKmigk3IENfOXvJRhXJfLXshaqgZ6o="; - outputFiles = [ "lib/*" ]; - dllFiles = [ "Fantomas*.dll" ]; - - meta = with lib; { - description = "FSharp source code formatter"; - homepage = "https://github.com/fsprojects/fantomas"; - license = licenses.asl20; - maintainers = [ maintainers.ratsclub ]; - }; - }; - - FSharpCompilerCodeDom = fetchNuGet { - baseName = "FSharp.Compiler.CodeDom"; - version = "0.9.2"; - sha256 = "0cy9gbvmfx2g74m7bgp6x9mr4avb6s560yjii7cyyxb7jlwabfcj"; - outputFiles = [ "lib/net40/*" ]; - }; - - FSharpCore302 = fetchNuGet { - baseName = "FSharp.Core"; - version = "3.0.2"; - sha256 = "1s4pqwbmhrsg5sw8i6dixdri3x0yjyilmkhsf4apfkp80si7d73q"; - outputFiles = [ "*" ]; - }; - - FSharpCore3125 = fetchNuGet { - baseName = "FSharp.Core"; - version = "3.1.2.5"; - sha256 = "0pfvjimrgrffb5rj612gsid044lfpk8g2cxyh9792dc1n8ck5hih"; - outputFiles = [ "*" ]; - }; - - FSharpCore4001 = fetchNuGet { - baseName = "FSharp.Core"; - version = "4.0.0.1"; - sha256 = "0v53iq12ji2d1bkdyg9dn8sz5l93sprrh835amh39dghh8v8vm8k"; - outputFiles = [ "*" ]; - }; - - FSharpCore4117 = fetchNuGet { - baseName = "FSharp.Core"; - version = "4.1.17"; - sha256 = "1yk23ir66fgqm5r6qyf66zf64l0s223l3yd7p9yvbyimyg0hgzb1"; - outputFiles = [ "*" ]; - }; - - FSharpData = fetchNuGet { - baseName = "FSharp.Data"; - version = "4.1.1"; - sha256 = "0ytjiQi8vQQU51JYexnC13Bi7NqVmLRzM75SOZ+hhQU="; - outputFiles = [ "lib/*" ]; - - meta = with lib; { - description = "F# Data: Library for Data Access"; - homepage = "https://fsprojects.github.io/FSharp.Data/"; - license = licenses.asl20; - maintainers = [ maintainers.ratsclub ]; - }; - }; - - FSharpData225 = fetchNuGet { - baseName = "FSharp.Data"; - version = "2.2.5"; - sha256 = "1c9l6bk0d2srccash2980y9phq3kmfm0m76k4wghnysnq94vm724"; - outputFiles = [ "*" ]; - }; - - FSharpDataSQLProvider = fetchNuGet { - baseName = "SQLProvider"; - version = "0.0.9-alpha"; - sha256 = "1wmgr5ca9hh6a7f0s8yc87n6arn7bq6nwc8n4crbbdil4r0bw46w"; - outputFiles = [ "lib/net40/*" ]; - }; - - FsCheck = fetchNuGet { - baseName = "FsCheck"; - version = "1.0.4"; - sha256 = "1q2wk4d4d1q94qzcccgmxb2lh0b8qkmpyz0p7lfphkw2gx6cy5ad"; - outputFiles = [ "lib/net45/*" ]; - }; - - FsCheck262 = fetchNuGet { - baseName = "FsCheck"; - version = "2.6.2"; - sha256 = "0fh9yvsc4i61z31qf00d6gjv6xxd54pv1ykf5bpv95a5crc3qfvl"; - outputFiles = [ "*" ]; - }; - - FsCheckNunit = fetchNuGet { - baseName = "FsCheck.Nunit"; - version = "1.0.4"; - sha256 = "1s62jrsa5hxqy1ginl8r29rjdc8vbkwmz7mb0hglhwccdqfyr5xy"; - outputFiles = [ "lib/net45/*" ]; - }; - - FSharpCompilerTools = fetchNuGet { - baseName = "FSharp.Compiler.Tools"; - version = "4.1.27"; - sha256 = "1m3hl8ja9gp5ajxmjf7bnq24bbkd6kx7yhxf4zb8si27h1n9l6dl"; - outputFiles = [ "*" ]; - }; - - FsLexYacc = fetchNuGet { - baseName = "FsLexYacc"; - version = "6.1.0"; - sha256 = "1v5myn62zqs431i046gscqw2v0c969fc7pdplx7z9cnpy0p2s4rv"; - outputFiles = [ "build/*" ]; - }; - - FsLexYacc706 = fetchNuGet { - baseName = "FsLexYacc"; - version = "7.0.6"; - sha256 = "0xwiq8q5q6ga6zj24w83ch5csbv405xcg6jg2hmnjic0npz0drk2"; - outputFiles = [ "*" ]; - }; - - FsLexYaccRuntime = fetchNuGet { - baseName = "FsLexYacc.Runtime"; - version = "6.1.0"; - sha256 = "18vrx4lxsn4hkfishg4abv0d4q21dsph0bm4mdq5z8afaypp5cr7"; - outputFiles = [ "lib/net40/*" ]; - }; - - FsPickler = fetchNuGet { - baseName = "FsPickler"; - version = "1.2.9"; - sha256 = "12fgcj7pvffsj1s1kaz15j22i1n98dy5mf4z84555xdf7mw7dpm4"; - outputFiles = [ "lib/net45/*" ]; - }; - - FsUnit = fetchNuGet { - baseName = "FsUnit"; - version = "1.3.0.1"; - sha256 = "1k7w8pc81aplsfn7n46617khmzingd2v7hcgdhh7vgsssibwms64"; - outputFiles = [ "Lib/Net40/*" ]; - }; - - FSharpFormatting = fetchNuGet { - baseName = "FSharp.Formatting"; - version = "2.9.8"; - sha256 = "1bswcpa68i2lqds4kkl2qxgkfrppbpxa4jkyja48azljajh0df3m"; - outputFiles = [ "lib/net40/*" ]; - }; - NUnit3 = fetchNuGet { baseName = "NUnit"; version = "3.0.1"; @@ -186,13 +22,6 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; { outputFiles = [ "lib/*" ]; }; - NUnit350 = fetchNuGet { - baseName = "NUnit"; - version = "3.5.0"; - sha256 = "19fxq9cf754ygda5c8rn1zqs71pfxi7mb96jwqhlichnqih6i16z"; - outputFiles = [ "*" ]; - }; - NUnit2 = fetchNuGet { baseName = "NUnit"; version = "2.6.4"; @@ -244,13 +73,6 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; { outputFiles = [ "tools/*" ]; }; - SystemValueTuple = fetchNuGet { - baseName = "System.ValueTuple"; - version = "4.3.1"; - sha256 = "0qzq878s66yfkf4n2b9af8lw2bx45s3cg6mi0w8w0bi358fa7q70"; - outputFiles = [ "*" ]; - }; - RestSharp = fetchNuGet { baseName = "RestSharp"; version = "105.2.3"; @@ -293,20 +115,6 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; { outputFiles = [ "lib/*" ]; }; - MicrosoftDiaSymReader = fetchNuGet { - baseName = "Microsoft.DiaSymReader"; - version = "1.1.0"; - sha256 = "04dgwy6nyxksd1nb24k5c5vz8naggg7hryadvwqnm2v3alkh6g88"; - outputFiles = [ "*" ]; - }; - - MicrosoftDiaSymReaderPortablePdb = fetchNuGet { - baseName = "Microsoft.DiaSymReader.PortablePdb"; - version = "1.2.0"; - sha256 = "0qa8sqg0lzz9galkkfyi8rkbkali0nxm3qd5y4dlxp96ngrq5ldz"; - outputFiles = [ "*" ]; - }; - NUnitRunners = fetchNuGet { baseName = "NUnit.Runners"; version = "2.6.4"; @@ -315,35 +123,6 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; { preInstall = "mv -v tools/lib/* tools && rmdir -v tools/lib"; }; - SystemCollectionsImmutable = fetchNuGet { - baseName = "System.Collections.Immutable"; - version = "1.1.36"; - sha256 = "0760kzf5s771pnvnxsgas446kqdh1b71w6g3k75jpzldfmsd3vyq"; - outputFiles = [ "lib/portable-net45+win8+wp8+wpa81/*" ]; - }; - - SystemCollectionsImmutable131 = fetchNuGet { - baseName = "System.Collections.Immutable"; - version = "1.3.1"; - sha256 = "149fcp7k7r9iw24dv5hbaij0c38kcv28dyhzbkggilfh4x2hy8c2"; - outputFiles = [ "*" ]; - }; - - SystemReflectionMetadata = fetchNuGet { - baseName = "System.Reflection.Metadata"; - version = "1.4.2"; - sha256 = "19fhdgd35yg52gyckhgwrphq07nv7v7r73hcg69ns94xfg1i6r7i"; - outputFiles = [ "*" ]; - }; - - Suave = fetchNuGet { - baseName = "Suave"; - version = "0.29.0"; - propagatedBuildInputs = [ FsPickler ]; - sha256 = "0rgqy0afwm50gq5ca94w16s565yx5wf961683ghfld6ir0k3dhln"; - outputFiles = [ "lib/net40/*" ]; - }; - # SOURCE PACKAGES Boogie = buildDotnetPackage rec { @@ -467,273 +246,6 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; { }; }; - Deedle = fetchNuGet { - baseName = "Deedle"; - version = "1.2.5"; - sha256 = "0g19ll6bp97ixprcnpwwvshr1n9jxxf9xjhkxp0r63mg46z48jnw"; - outputFiles = [ "*" ]; - }; - - ExcelDna = buildDotnetPackage { - baseName = "Excel-DNA"; - version = "0.32.0"; - - src = fetchFromGitHub { - owner = "Excel-DNA"; - repo = "ExcelDna"; - rev = "10a163843bcc2fb5517f6f3d499e18a8b64df511"; - sha256 = "1w2ag9na20ly0m2sic3nkgdc4qqyb4x4c9iv588ynpkgd1pjndrk"; - }; - - buildInputs = [ ]; - - preConfigure = '' - rm -vf Distribution/*.dll Distribution/*.exe # Make sure we don't use those - substituteInPlace Source/ExcelDna.Integration/ExcelDna.Integration.csproj --replace LogDisplay.designer.cs LogDisplay.Designer.cs - ''; - - xBuildFiles = [ "Source/ExcelDna.sln" ]; - outputFiles = [ "Source/ExcelDnaPack/bin/Release/*" "Distribution/ExcelDna.xll" "Distribution/ExcelDna64.xll" ]; - - meta = { - description = "Excel-DNA is an independent project to integrate .NET into Excel"; - homepage = "https://excel-dna.net/"; - license = lib.licenses.mit; - maintainers = with lib.maintainers; [ obadz ]; - platforms = with lib.platforms; linux; - }; - }; - - ExcelDnaRegistration = buildDotnetPackage rec { - baseName = "Excel-DNA.Registration"; - version = "git-" + (builtins.substring 0 10 rev); - rev = "69abb1b3528f40dbcf425e13690aaeab5f707bb6"; - - src = fetchFromGitHub { - inherit rev; - owner = "Excel-DNA"; - repo = "Registration"; - sha256 = "094932h6r2f4x9r5mnw8rm4jzz8vkfv90d95qi3h0i89ws2dnn07"; - }; - - buildInputs = [ - fsharp - dotnetPackages.ExcelDna - ]; - - xBuildFiles = [ "Source/ExcelDna.Registration/ExcelDna.Registration.csproj" "Source/ExcelDna.Registration.FSharp/ExcelDna.Registration.FSharp.fsproj" ]; - outputFiles = [ "Source/ExcelDna.Registration/bin/Release/*" "Source/ExcelDna.Registration.FSharp/bin/Release/*FSharp*" ]; - - meta = { - description = "This library implements helper functions to assist and modify the Excel-DNA function registration"; - homepage = "https://github.com/Excel-DNA/Registration"; - license = lib.licenses.mit; - maintainers = with lib.maintainers; [ obadz ]; - platforms = with lib.platforms; linux; - }; - }; - - ExtCore = buildDotnetPackage { - baseName = "ExtCore"; - version = "0.8.46"; - - src = fetchFromGitHub { - owner = "jack-pappas"; - repo = "ExtCore"; - rev = "0269b6d3c479f45abd7aa983aaeca08d07473943"; - sha256 = "1kxkiszpvqisffhd6wciha8j3dhkq06w9c540bmq8zixa4xaj83p"; - }; - - buildInputs = [ - fsharp - dotnetPackages.NUnit - dotnetPackages.FsCheck - ]; - - postConfigure = '' - # Fix case - sed -i -e s,nuget.targets,NuGet.targets, ExtCore.Tests/ExtCore.Tests.fsproj - ''; - - xBuildFlags = [ "/p:Configuration=Release (net45)" ]; - outputFiles = [ "ExtCore/bin/net45/Release/*" ]; - - meta = { - description = "ExtCore is an extended core library for F#"; - homepage = "https://github.com/jack-pappas/ExtCore"; - license = lib.licenses.asl20; - maintainers = with lib.maintainers; [ obadz ]; - platforms = with lib.platforms; linux; - broken = true; - }; - }; - - FSharpAutoComplete = buildDotnetPackage rec { - baseName = "FSharp.AutoComplete"; - version = "0.18.2"; - - src = fetchFromGitHub { - owner = "fsharp"; - repo = "FSharp.AutoComplete"; - rev = version; - sha256 = "1ikl72003xzqq2dc8i6h404hnq3q5g1p1q4rmzz9bdm7282q2jgs"; - }; - - buildInputs = [ - fsharp - glib - dotnetPackages.FSharpCompilerService - dotnetPackages.NewtonsoftJson - dotnetPackages.NDeskOptions - ]; - - outputFiles = [ "FSharp.AutoComplete/bin/Release/*" ]; - - meta = { - description = "An interface to the FSharp.Compiler.Service project"; - longDescription = '' - This project provides a command-line interface to the - FSharp.Compiler.Service project. It is intended to be used as a backend - service for rich editing or 'intellisense' features for editors. - ''; - homepage = "https://github.com/fsharp/FSharp.AutoComplete"; - license = lib.licenses.asl20; - maintainers = with lib.maintainers; [ obadz ]; - platforms = with lib.platforms; linux; - }; - }; - - FSharpCompilerService = buildDotnetPackage { - baseName = "FSharp.Compiler.Service"; - version = "0.0.90"; - - src = fetchFromGitHub { - owner = "fsharp"; - repo = "FSharp.Compiler.Service"; - rev = "a87939ab3f3c571cad79bc3b5f298aa3e180e6b3"; - sha256 = "0axr38q8m0h11hhbxg5myd1wwfgysadriln8c7bqsv5sf9djihvd"; - }; - - buildInputs = [ - fsharp - dotnetPackages.NUnit - ]; - - outputFiles = [ "bin/v4.5/*" ]; - - meta = { - description = "The F# compiler services package is a component derived from the F# compiler source code that exposes additional functionality for implementing F# language bindings"; - homepage = "https://fsharp.github.io/FSharp.Compiler.Service/"; - license = lib.licenses.asl20; - maintainers = with lib.maintainers; [ obadz ]; - platforms = with lib.platforms; linux; - }; - }; - - # FSharpxExtras = buildDotnetPackage rec { - # baseName = "FSharpx.Extras"; - # version = "1.8.41"; - # - # src = fetchurl { - # name = "${baseName}-${version}.tar.gz"; - # url = "https://github.com/fsprojects/FSharpx.Extras/archive/${version}.tar.gz"; - # sha256 = "102z5bvk3ffi1crgyp51488vamv41fsf61n8x8pdiznq155zydhl"; - # }; - # - # buildInputs = [ - # fsharp - # dotnetPackages.NUnit - # dotnetPackages.FsCheck - # dotnetPackages.FsCheckNunit - # dotnetPackages.FsUnit - # ]; - # - # patches = [ ./disable_excel.patch ]; - # - # xBuildFiles = [ "FSharpx.WithTypeProviders.sln" ]; - # outputFiles = [ "build/*" ]; - # - # meta = { - # description = "FSharpx.Extras is a collection of libraries and tools for use with F#"; - # homepage = "https://fsprojects.github.io/FSharpx.Extras/"; - # license = lib.licenses.asl20; - # maintainers = with lib.maintainers; [ obadz ]; - # platforms = with lib.platforms; linux; - # }; - # }; - - GitVersionTree = buildDotnetPackage { - baseName = "GitVersionTree"; - version = "2013-10-01"; - - src = fetchFromGitHub { - owner = "crc8"; - repo = "GitVersionTree"; - rev = "58dc39c43cffea44f721ee4425835e56518f7da2"; - sha256 = "0mna5pkpqkdr5jgn8paz004h1pa24ncsvmi2c8s4gp94nfw34x05"; - }; - - buildInputs = with pkgs; [ ed ]; - - postPatch = '' - ed -v -p: -s GitVersionTree/Program.cs << EOF - /Main() - c - static void Main(string[] args) - . - /EnableVisualStyles - i - Reg.Write("GitPath", "${pkgs.gitMinimal}/bin/git"); - Reg.Write("GraphvizPath", "${pkgs.graphviz}/bin/dot"); - if (args.Length > 0) { - Reg.Write("GitRepositoryPath", args[0]); - } - . - w - EOF - - substituteInPlace GitVersionTree/Forms/MainForm.cs \ - --replace 'Directory.GetParent(Application.ExecutablePath)' 'Environment.CurrentDirectory' \ - --replace '\\' '/' \ - --replace '@"\"' '"/"' - ''; - - outputFiles = [ "GitVersionTree/bin/Release/*" ]; - exeFiles = [ "GitVersionTree.exe" ]; - - meta = with lib; { - description = "A tool to help visualize git revisions and branches"; - homepage = "https://github.com/crc8/GitVersionTree"; - license = licenses.gpl2; - maintainers = with maintainers; [ obadz ]; - platforms = platforms.all; - }; - }; - - MathNetNumerics = buildDotnetPackage rec { - baseName = "MathNet.Numerics"; - version = "3.7.0"; - - src = fetchurl { - name = "${baseName}-${version}.tar.gz"; - url = "https://github.com/mathnet/mathnet-numerics/archive/v${version}.tar.gz"; - sha256 = "1yq6aqmc2gwh96z544qn83kby01lv1lsxm158hq0bimv2i9yywc7"; - }; - - buildInputs = [ fsharp ]; - - xBuildFiles = [ "MathNet.Numerics.sln" ]; - outputFiles = [ "out/lib/Net40/*" "src/FSharp/MathNet.Numerics.fsx" "src/FSharp/MathNet.Numerics.IfSharp.fsx" ]; - - meta = { - description = "Math.NET Numerics is an opensource numerical library for .Net, Silverlight and Mono"; - homepage = "https://numerics.mathdotnet.com/"; - license = lib.licenses.mit; - maintainers = with lib.maintainers; [ obadz ]; - platforms = with lib.platforms; linux; - }; - }; - MonoAddins = buildDotnetPackage rec { baseName = "Mono.Addins"; version = "1.2"; @@ -766,94 +278,6 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; { }; }; - # MonoDevelopFSharpBinding = buildDotnetPackage rec { - # baseName = "MonoDevelop.FSharpBinding"; - # version = "git-a09c8185eb"; - - # broken = true; - - # src = fetchFromGitHub { - # owner = "fsharp"; - # repo = "fsharpbinding"; - # rev = "a09c8185ebf23fe2f7d22b14b4af2e3268d4f011"; - # sha256 = "1zp5gig42s1h681kch0rw5ykbbj0mcsmdvpyz1319wy9s7n2ng91"; - # }; - - # buildInputs = [ - # fsharp - # monodevelop - # pkgs.gtk-sharp - # pkgs.gnome-sharp - # dotnetPackages.ExtCore - # dotnetPackages.FSharpCompilerService - # dotnetPackages.FSharpCompilerCodeDom - # dotnetPackages.FSharpAutoComplete - # dotnetPackages.Fantomas - # ]; - - # patches = [ - # ../development/dotnet-modules/patches/monodevelop-fsharpbinding.references.patch - # ../development/dotnet-modules/patches/monodevelop-fsharpbinding.addin-xml.patch - # ]; - - # preConfigure = '' - # substituteInPlace monodevelop/configure.fsx --replace /usr/lib/monodevelop ${monodevelop}/lib/monodevelop - # substituteInPlace monodevelop/configure.fsx --replace bin/MonoDevelop.exe ../../bin/monodevelop - # (cd monodevelop; fsharpi ./configure.fsx) - # ''; - - # # This will not work as monodevelop probably looks in absolute nix store path rather than path - # # relative to its executable. Need to ln -s /run/current-system/sw/lib/dotnet/MonoDevelop.FSharpBinding - # # ~/.local/share/MonoDevelop-5.0/LocalInstall/Addins/ to install until we have a better way - - # # postInstall = '' - # # mkdir -p "$out/lib/monodevelop/AddIns" - # # ln -sv "$out/lib/dotnet/${baseName}" "$out/lib/monodevelop/AddIns" - # # ''; - - # xBuildFiles = [ "monodevelop/MonoDevelop.FSharpBinding/MonoDevelop.FSharp.mac-linux.fsproj" ]; - # outputFiles = [ "monodevelop/bin/mac-linux/Release/*" ]; - - # meta = { - # description = "F# addin for MonoDevelop 5.9"; - # homepage = "https://github.com/fsharp/fsharpbinding/tree/5.9"; - # license = lib.licenses.asl20; - # maintainers = with lib.maintainers; [ obadz ]; - # platforms = with lib.platforms; linux; - # }; - # }; - - NDeskOptions = stdenv.mkDerivation rec { - pname = "NDesk.Options"; - version = "0.2.1"; - - src = fetchurl { - name = "${pname}-${version}.tar.gz"; - url = "http://www.ndesk.org/archive/ndesk-options/ndesk-options-${version}.tar.gz"; - sha256 = "1y25bfapafwmifakjzyb9c70qqpvza8g5j2jpf08j8wwzkrb6r28"; - }; - - buildInputs = [ - mono - pkg-config - ]; - - postInstall = '' - # Otherwise pkg-config won't find it and the DLL will get duplicated - ln -sv $out/lib/pkgconfig/ndesk-options.pc $out/lib/pkgconfig/NDesk.Options.pc - ''; - - dontStrip = true; - - meta = { - description = "A callback-based program option parser for C#"; - homepage = "http://www.ndesk.org/Options"; - license = lib.licenses.mit; - maintainers = with lib.maintainers; [ obadz ]; - platforms = with lib.platforms; linux; - }; - }; - NewtonsoftJson = fetchNuGet { baseName = "Newtonsoft.Json"; version = "11.0.2"; @@ -886,79 +310,4 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; { outputFiles = [ "*" ]; }; - Projekt = buildDotnetPackage rec { - baseName = "projekt"; - version = "git-" + (builtins.substring 0 10 rev); - rev = "715a21e5cd3c86310387562618b04e979d0ec9c4"; - - src = fetchFromGitHub { - inherit rev; - owner = "kjnilsson"; - repo = "projekt"; - sha256 = "1ph3af07wmia6qkiq1qlywaj2xh6zn5drdx19dwb1g3237h5fnz0"; - }; - - buildInputs = [ - fsharp - dotnetPackages.UnionArgParser - dotnetPackages.FsUnit - ]; - - preConfigure = '' - sed -i -e "s/FSharp.Core, Version=\$(TargetFSharpCoreVersion), Culture=neutral, PublicKeyToken=b03f5f7f11d50a3a/FSharp.Core/" src/Projekt/Projekt.fsproj - ''; - - outputFiles = [ "src/Projekt/bin/Release/*" ]; - - meta = { - description = "A command-line tool for manipulating F# project files"; - homepage = "https://github.com/kjnilsson/projekt"; - license = lib.licenses.mit; - maintainers = with lib.maintainers; [ obadz ]; - platforms = with lib.platforms; linux; - }; - }; - - UnionArgParser = buildDotnetPackage { - baseName = "UnionArgParser"; - version = "0.8.7"; - - src = fetchFromGitHub { - owner = "nessos"; - repo = "UnionArgParser"; - rev = "acaeb946e53cbb0bd9768977c656b3242146070a"; - sha256 = "1yrs7ycf2hg7h8z6vm9lr7i3gr9s30k74fr2maigdydnnls93als"; - }; - - buildInputs = [ - fsharp - dotnetPackages.NUnit - dotnetPackages.FsUnit - ]; - - outputFiles = [ "bin/net40/*" ]; - - meta = { - description = "A declarative CLI argument/XML configuration parser for F# applications"; - homepage = "https://nessos.github.io/UnionArgParser/"; - license = lib.licenses.mit; - maintainers = with lib.maintainers; [ obadz ]; - platforms = with lib.platforms; linux; - }; - }; - - YamlDotNet = fetchNuGet { - baseName = "YamlDotNet"; - version = "11.1.1"; - sha256 = "rwZ/QyDVrN3wGrEYKY3QY5Xqo2Tp3FkR6dh4QrC+QS0="; - outputFiles = [ "lib/*" ]; - - meta = with lib; { - description = "YamlDotNet is a .NET library for YAML"; - homepage = "https://github.com/aaubry/YamlDotNet"; - license = licenses.mit; - maintainers = [ maintainers.ratsclub ]; - }; - }; - }; in self diff --git a/third_party/nixpkgs/pkgs/top-level/kodi-packages.nix b/third_party/nixpkgs/pkgs/top-level/kodi-packages.nix index f9bf8dc870..b0e9e8c0a1 100644 --- a/third_party/nixpkgs/pkgs/top-level/kodi-packages.nix +++ b/third_party/nixpkgs/pkgs/top-level/kodi-packages.nix @@ -126,4 +126,6 @@ let self = rec { urllib3 = callPackage ../applications/video/kodi-packages/urllib3 { }; + websocket = callPackage ../applications/video/kodi-packages/websocket { }; + }; in self diff --git a/third_party/nixpkgs/pkgs/top-level/ocaml-packages.nix b/third_party/nixpkgs/pkgs/top-level/ocaml-packages.nix index 92894bf7a3..e040cef157 100644 --- a/third_party/nixpkgs/pkgs/top-level/ocaml-packages.nix +++ b/third_party/nixpkgs/pkgs/top-level/ocaml-packages.nix @@ -80,6 +80,8 @@ let bos = callPackage ../development/ocaml-modules/bos { }; + bz2 = callPackage ../development/ocaml-modules/bz2 { }; + ca-certs = callPackage ../development/ocaml-modules/ca-certs { }; ca-certs-nss = callPackage ../development/ocaml-modules/ca-certs-nss { }; @@ -213,10 +215,9 @@ let csexp = callPackage ../development/ocaml-modules/csexp { }; - cstruct = - if lib.versionAtLeast ocaml.version "4.2" - then callPackage ../development/ocaml-modules/cstruct {} - else callPackage ../development/ocaml-modules/cstruct/1.9.0.nix { }; + cstruct = callPackage ../development/ocaml-modules/cstruct {}; + + cstruct-async = callPackage ../development/ocaml-modules/cstruct/async.nix { }; cstruct-lwt = callPackage ../development/ocaml-modules/cstruct/lwt.nix { }; @@ -231,6 +232,8 @@ let csv-lwt = callPackage ../development/ocaml-modules/csv/lwt.nix { }; + cudf = callPackage ../development/ocaml-modules/cudf { }; + curly = callPackage ../development/ocaml-modules/curly { inherit (pkgs) curl; }; @@ -275,6 +278,8 @@ let domain-name = callPackage ../development/ocaml-modules/domain-name { }; + dose3 = callPackage ../development/ocaml-modules/dose3 { }; + dtoa = callPackage ../development/ocaml-modules/dtoa { }; duff = callPackage ../development/ocaml-modules/duff { }; @@ -606,7 +611,7 @@ let }; lwt = callPackage ../development/ocaml-modules/lwt { - ocaml-migrate-parsetree = ocaml-migrate-parsetree-2-1; + ocaml-migrate-parsetree = ocaml-migrate-parsetree-2; }; ocaml_lwt = lwt; @@ -641,6 +646,8 @@ let markup = callPackage ../development/ocaml-modules/markup { }; + mccs = callPackage ../development/ocaml-modules/mccs { }; + mdx = callPackage ../development/ocaml-modules/mdx { }; menhir = callPackage ../development/ocaml-modules/menhir { }; @@ -824,6 +831,7 @@ let gettext-stub = callPackage ../development/ocaml-modules/ocaml-gettext/stub.nix { }; ocamlgraph = callPackage ../development/ocaml-modules/ocamlgraph { }; + ocamlgraph_gtk = callPackage ../development/ocaml-modules/ocamlgraph/gtk.nix { }; ocaml_http = callPackage ../development/ocaml-modules/http { }; @@ -839,12 +847,12 @@ let ocaml-migrate-parsetree-1-8 = callPackage ../development/ocaml-modules/ocaml-migrate-parsetree/1.8.x.nix { }; - ocaml-migrate-parsetree-2-1 = callPackage ../development/ocaml-modules/ocaml-migrate-parsetree/2.1.x.nix { }; + ocaml-migrate-parsetree-2 = callPackage ../development/ocaml-modules/ocaml-migrate-parsetree/2.x.nix { }; ocamlmod = callPackage ../development/tools/ocaml/ocamlmod { }; ocaml-monadic = callPackage ../development/ocaml-modules/ocaml-monadic { - ocaml-migrate-parsetree = ocaml-migrate-parsetree-2-1; + ocaml-migrate-parsetree = ocaml-migrate-parsetree-2; }; ocaml_mysql = callPackage ../development/ocaml-modules/mysql { }; @@ -1029,6 +1037,8 @@ let tls = callPackage ../development/ocaml-modules/tls { }; + tls-async = callPackage ../development/ocaml-modules/tls/async.nix { }; + tls-mirage = callPackage ../development/ocaml-modules/tls/mirage.nix { }; torch = callPackage ../development/ocaml-modules/torch { @@ -1141,6 +1151,8 @@ let reason = callPackage ../development/compilers/reason { }; + reason-native = lib.recurseIntoAttrs (callPackage ../development/ocaml-modules/reason-native { }); + rope = callPackage ../development/ocaml-modules/rope { }; rpclib = callPackage ../development/ocaml-modules/rpclib { }; @@ -1507,6 +1519,8 @@ in let inherit (pkgs) callPackage; in rec ocamlPackages_4_12 = mkOcamlPackages (callPackage ../development/compilers/ocaml/4.12.nix { }); + ocamlPackages_4_13 = mkOcamlPackages (callPackage ../development/compilers/ocaml/4.13.nix { }); + ocamlPackages_latest = ocamlPackages_4_12; ocamlPackages = ocamlPackages_4_12; diff --git a/third_party/nixpkgs/pkgs/top-level/perl-packages.nix b/third_party/nixpkgs/pkgs/top-level/perl-packages.nix index 7b0c8b5fe9..5ec39ab41f 100644 --- a/third_party/nixpkgs/pkgs/top-level/perl-packages.nix +++ b/third_party/nixpkgs/pkgs/top-level/perl-packages.nix @@ -8092,7 +8092,7 @@ let sha256 = "0wm87gpagb35d7c4nyaf9z3ry0jb3g5xpyjfzcxqcfxyj2zy9ip2"; }; doCheck = false; # Failed test 'desktop file is the right one' - buildInputs = [ FileBaseDir FileDesktopEntry ]; + buildInputs = [ FileBaseDir FileDesktopEntry EncodeLocale ]; }; FileMMagic = buildPerlPackage { @@ -8930,7 +8930,7 @@ let url = "mirror://cpan/authors/id/T/TS/TSCH/Gnome2-Wnck-0.16.tar.gz"; sha256 = "604a8ece88ac29f132d59b0caac27657ec31371c1606a4698a2160e88ac586e5"; }; - buildInputs = [ pkgs.libwnck pkgs.glib pkgs.gtk2 ]; + buildInputs = [ pkgs.libwnck2 pkgs.glib pkgs.gtk2 ]; propagatedBuildInputs = [ Gtk2 ]; meta = { description = "Perl interface to the Window Navigator Construction Kit"; @@ -11108,11 +11108,13 @@ let url = "mirror://cpan/authors/id/B/BR/BRMILLER/${pname}-${version}.tar.gz"; sha256 = "0dr69rgl4si9i9ww1r4dc7apgb7y6f7ih808w4g0924cvz823s0x"; }; + outputs = [ "out" "tex" ]; propagatedBuildInputs = [ ArchiveZip DBFile FileWhich IOString ImageSize JSONXS LWP ParseRecDescent PerlMagick PodParser TextUnidecode XMLLibXSLT ]; preCheck = '' rm t/931_epub.t # epub test fails ''; nativeBuildInputs = [ pkgs.makeWrapper ] ++ lib.optional stdenv.isDarwin shortenPerlShebang; + makeMakerFlags = "TEXMF=\${tex} NOMKTEXLSR"; # shebangs need to be patched before executables are copied to $out preBuild = '' patchShebangs bin/ @@ -11129,7 +11131,13 @@ let ''; meta = { description = "Transforms TeX and LaTeX into XML/HTML/MathML"; - license = lib.licenses.free; + homepage = "https://dlmf.nist.gov/LaTeXML/"; + license = lib.licenses.publicDomain; + maintainers = with maintainers; [ xworld21 ]; + }; + passthru = { + tlType = "run"; + pkgs = [ LaTeXML.tex ]; }; }; @@ -13803,12 +13811,12 @@ let MojoliciousPluginWebpack = buildPerlPackage { pname = "Mojolicious-Plugin-Webpack"; - version = "0.14"; + version = "1.01"; src = fetchurl { - url = "mirror://cpan/authors/id/J/JH/JHTHORSEN/Mojolicious-Plugin-Webpack-0.14.tar.gz"; - sha256 = "0b1a9rm5rlpqj6skgic4qzy4b1p35r2dhkh3rwaaypf9ha70i9gc"; + url = "mirror://cpan/authors/id/J/JH/JHTHORSEN/Mojolicious-Plugin-Webpack-1.01.tar.gz"; + sha256 = "1w6dr7yb8lvvx5z2xsmshp2cf4b7dynv05yhq0rk7zwif5v6gsvm"; }; - propagatedBuildInputs = [ Mojolicious ]; + propagatedBuildInputs = [ Mojolicious Filechdir ]; meta = { homepage = "https://github.com/jhthorsen/mojolicious-plugin-webpack"; description = "Mojolicious <3 Webpack"; @@ -23939,6 +23947,21 @@ let }; }; + XSParseKeyword = buildPerlModule { + pname = "XS-Parse-Keyword"; + version = "0.06"; + src = fetchurl { + url = "mirror://cpan/authors/id/P/PE/PEVANS/XS-Parse-Keyword-0.06.tar.gz"; + sha256 = "0nnr8akkxb2h2y3d5r51pr84vvxkq89ynmi9azkbnn79jmbcbgvq"; + }; + perlPreHook = lib.optionalString stdenv.isDarwin "export LD=$CC"; + meta = { + description = "XS functions to assist in parsing keyword syntax"; + license = with lib.licenses; [ artistic1 gpl1Plus ]; + maintainers = [ maintainers.zakame ]; + }; + }; + XSParseSublike = buildPerlModule { pname = "XS-Parse-Sublike"; version = "0.10"; diff --git a/third_party/nixpkgs/pkgs/top-level/php-packages.nix b/third_party/nixpkgs/pkgs/top-level/php-packages.nix index 5575c1d429..e518ee68f7 100644 --- a/third_party/nixpkgs/pkgs/top-level/php-packages.nix +++ b/third_party/nixpkgs/pkgs/top-level/php-packages.nix @@ -1,9 +1,49 @@ -{ stdenv, lib, pkgs, fetchgit, phpPackage, autoconf, pkg-config, re2c -, gettext, bzip2, curl, libxml2, openssl, gmp, icu64, oniguruma, libsodium -, html-tidy, libzip, zlib, pcre2, libxslt, aspell, openldap, cyrus_sasl -, uwimap, pam, libiconv, enchant1, libXpm, gd, libwebp, libjpeg, libpng -, freetype, libffi, freetds, postgresql, sqlite, net-snmp, unixODBC, libedit -, readline, rsync, fetchpatch, valgrind +{ stdenv +, lib +, pkgs +, fetchgit +, phpPackage +, autoconf +, pkg-config +, aspell +, bzip2 +, curl +, cyrus_sasl +, enchant1 +, fetchpatch +, freetds +, freetype +, gd +, gettext +, gmp +, html-tidy +, icu64 +, libXpm +, libedit +, libffi +, libiconv +, libjpeg +, libpng +, libsodium +, libwebp +, libxml2 +, libxslt +, libzip +, net-snmp +, oniguruma +, openldap +, openssl +, pam +, pcre2 +, postgresql +, re2c +, readline +, rsync +, sqlite +, unixODBC +, uwimap +, valgrind +, zlib }: lib.makeScope pkgs.newScope (self: with self; { @@ -129,401 +169,475 @@ lib.makeScope pkgs.newScope (self: with self; { xdebug = callPackage ../development/php-packages/xdebug { }; yaml = callPackage ../development/php-packages/yaml { }; - } // (let - # Function to build a single php extension based on the php version. - # - # Name passed is the name of the extension and is automatically used - # to add the configureFlag "--enable-${name}", which can be overriden. - # - # Build inputs is used for extra deps that may be needed. And zendExtension - # will mark the extension as a zend extension or not. - mkExtension = { - name - , configureFlags ? [ "--enable-${name}" ] - , internalDeps ? [] - , postPhpize ? "" - , buildInputs ? [] - , zendExtension ? false - , doCheck ? true - , ... - }@args: stdenv.mkDerivation ((builtins.removeAttrs args [ "name" ]) // { - pname = "php-${name}"; - extensionName = name; + } // ( + let + # Function to build a single php extension based on the php version. + # + # Name passed is the name of the extension and is automatically used + # to add the configureFlag "--enable-${name}", which can be overriden. + # + # Build inputs is used for extra deps that may be needed. And zendExtension + # will mark the extension as a zend extension or not. + mkExtension = + { name + , configureFlags ? [ "--enable-${name}" ] + , internalDeps ? [ ] + , postPhpize ? "" + , buildInputs ? [ ] + , zendExtension ? false + , doCheck ? true + , ... + }@args: stdenv.mkDerivation ((builtins.removeAttrs args [ "name" ]) // { + pname = "php-${name}"; + extensionName = name; - inherit (php.unwrapped) version src; - sourceRoot = "php-${php.version}/ext/${name}"; + inherit (php.unwrapped) version src; + sourceRoot = "php-${php.version}/ext/${name}"; - enableParallelBuilding = true; - nativeBuildInputs = [ php.unwrapped autoconf pkg-config re2c ]; - inherit configureFlags internalDeps buildInputs - zendExtension doCheck; + enableParallelBuilding = true; + nativeBuildInputs = [ php.unwrapped autoconf pkg-config re2c ]; + inherit configureFlags internalDeps buildInputs + zendExtension doCheck; - prePatch = "pushd ../.."; - postPatch = "popd"; + prePatch = "pushd ../.."; + postPatch = "popd"; - preConfigure = '' - nullglobRestore=$(shopt -p nullglob) - shopt -u nullglob # To make ?-globbing work + preConfigure = '' + nullglobRestore=$(shopt -p nullglob) + shopt -u nullglob # To make ?-globbing work - # Some extensions have a config0.m4 or config9.m4 - if [ -f config?.m4 ]; then - mv config?.m4 config.m4 - fi + # Some extensions have a config0.m4 or config9.m4 + if [ -f config?.m4 ]; then + mv config?.m4 config.m4 + fi - $nullglobRestore - phpize - ${postPhpize} - ${lib.concatMapStringsSep "\n" - (dep: "mkdir -p ext; ln -s ${dep.dev}/include ext/${dep.extensionName}") - internalDeps} - ''; - checkPhase = "runHook preCheck; NO_INTERACTON=yes make test; runHook postCheck"; - outputs = [ "out" "dev" ]; - installPhase = '' - mkdir -p $out/lib/php/extensions - cp modules/${name}.so $out/lib/php/extensions/${name}.so - mkdir -p $dev/include - ${rsync}/bin/rsync -r --filter="+ */" \ - --filter="+ *.h" \ - --filter="- *" \ - --prune-empty-dirs \ - . $dev/include/ - ''; + $nullglobRestore + phpize + ${postPhpize} + ${lib.concatMapStringsSep "\n" + (dep: "mkdir -p ext; ln -s ${dep.dev}/include ext/${dep.extensionName}") + internalDeps} + ''; + checkPhase = "runHook preCheck; NO_INTERACTON=yes make test; runHook postCheck"; + outputs = [ "out" "dev" ]; + installPhase = '' + mkdir -p $out/lib/php/extensions + cp modules/${name}.so $out/lib/php/extensions/${name}.so + mkdir -p $dev/include + ${rsync}/bin/rsync -r --filter="+ */" \ + --filter="+ *.h" \ + --filter="- *" \ + --prune-empty-dirs \ + . $dev/include/ + ''; - meta = { - description = "PHP upstream extension: ${name}"; - inherit (php.meta) maintainers homepage license; - }; - }); + meta = { + description = "PHP upstream extension: ${name}"; + inherit (php.meta) maintainers homepage license; + }; + }); - # This list contains build instructions for different modules that one may - # want to build. - # - # These will be passed as arguments to mkExtension above. - extensionData = [ - { name = "bcmath"; } - { name = "bz2"; buildInputs = [ bzip2 ]; configureFlags = [ "--with-bz2=${bzip2.dev}" ]; } - { name = "calendar"; } - { name = "ctype"; } - { name = "curl"; - buildInputs = [ curl ]; - configureFlags = [ "--with-curl=${curl.dev}" ]; - doCheck = false; } - { name = "dba"; } - { name = "dom"; - buildInputs = [ libxml2 ]; - patches = [ - # https://github.com/php/php-src/pull/7030 - (fetchpatch { - url = "https://github.com/php/php-src/commit/4cc261aa6afca2190b1b74de39c3caa462ec6f0b.patch"; - sha256 = "11qsdiwj1zmpfc2pgh6nr0sn7qa1nyjg4jwf69cgwnd57qfjcy4k"; - excludes = [ "ext/dom/tests/bug43364.phpt" "ext/dom/tests/bug80268.phpt" ]; - }) - ]; - # For some reason `patch` fails to remove these files correctly. - # Since `postPatch` is already used in `mkExtension`, we have to make it here. - preCheck = '' - rm tests/bug43364.phpt - rm tests/bug80268.phpt - ''; - configureFlags = [ "--enable-dom" ] - # Required to build on darwin. - ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; } - { name = "enchant"; - buildInputs = [ enchant1 ]; - configureFlags = [ "--with-enchant=${enchant1}" ]; - # enchant1 doesn't build on darwin. - enable = (!stdenv.isDarwin); - doCheck = false; } - { name = "exif"; doCheck = false; } - { name = "ffi"; buildInputs = [ libffi ]; enable = lib.versionAtLeast php.version "7.4"; } - { name = "fileinfo"; buildInputs = [ pcre2 ]; } - { name = "filter"; buildInputs = [ pcre2 ]; } - { name = "ftp"; buildInputs = [ openssl ]; } - { name = "gd"; - buildInputs = [ zlib gd ]; - configureFlags = [ - "--enable-gd" - "--with-external-gd=${gd.dev}" - "--enable-gd-jis-conv" - ]; - doCheck = false; - enable = lib.versionAtLeast php.version "7.4"; } - { name = "gd"; - buildInputs = [ zlib gd libXpm ]; - configureFlags = [ - "--with-gd=${gd.dev}" - "--with-freetype-dir=${freetype.dev}" - "--with-jpeg-dir=${libjpeg.dev}" - "--with-png-dir=${libpng.dev}" - "--with-webp-dir=${libwebp}" - "--with-xpm-dir=${libXpm.dev}" - "--with-zlib-dir=${zlib.dev}" - "--enable-gd-jis-conv" - ]; - doCheck = false; - enable = lib.versionOlder php.version "7.4"; } - { name = "gettext"; - buildInputs = [ gettext ]; - patches = lib.optionals (lib.versionOlder php.version "7.4") [ - (fetchpatch { - url = "https://github.com/php/php-src/commit/632b6e7aac207194adc3d0b41615bfb610757f41.patch"; - sha256 = "0xn3ivhc4p070vbk5yx0mzj2n7p04drz3f98i77amr51w0vzv046"; - }) - ]; - postPhpize = ''substituteInPlace configure --replace 'as_fn_error $? "Cannot locate header file libintl.h" "$LINENO" 5' ':' ''; - configureFlags = [ "--with-gettext=${gettext}" ]; } - { name = "gmp"; - buildInputs = [ gmp ]; - configureFlags = [ "--with-gmp=${gmp.dev}" ]; } - { name = "hash"; enable = lib.versionOlder php.version "7.4"; } - { name = "iconv"; - configureFlags = [ - "--with-iconv${lib.optionalString stdenv.isDarwin "=${libiconv}"}" - ]; - patches = lib.optionals (lib.versionOlder php.version "8.0") [ - # Header path defaults to FHS location, preventing the configure script from detecting errno support. - (fetchpatch { - url = "https://github.com/fossar/nix-phps/raw/263861a8c9bdafd7abe44db6db4ef0179643680c/pkgs/iconv-header-path.patch"; - sha256 = "7GHnEUu+hcsQ4h3itDwk6p46ZKfib9JZ2XpWlXrdn6E="; - }) - ]; - doCheck = false; } - { name = "imap"; - buildInputs = [ uwimap openssl pam pcre2 ]; - configureFlags = [ "--with-imap=${uwimap}" "--with-imap-ssl" ]; - # uwimap doesn't build on darwin. - enable = (!stdenv.isDarwin); } - { name = "intl"; - buildInputs = [ icu64 ]; - patches = lib.optionals (lib.versionOlder php.version "7.4") [ - (fetchpatch { - url = "https://github.com/php/php-src/commit/93a9b56c90c334896e977721bfb3f38b1721cec6.patch"; - sha256 = "055l40lpyhb0rbjn6y23qkzdhvpp7inbnn6x13cpn4inmhjqfpg4"; - }) - ]; - } - { name = "json"; enable = lib.versionOlder php.version "8.0"; } - { name = "ldap"; - buildInputs = [ openldap cyrus_sasl ]; - configureFlags = [ - "--with-ldap" - "LDAP_DIR=${openldap.dev}" - "LDAP_INCDIR=${openldap.dev}/include" - "LDAP_LIBDIR=${openldap.out}/lib" - ] ++ lib.optionals stdenv.isLinux [ - "--with-ldap-sasl=${cyrus_sasl.dev}" - ]; - doCheck = false; } - { name = "mbstring"; buildInputs = [ oniguruma ] ++ lib.optionals (lib.versionAtLeast php.version "8.0") [ - pcre2 - ]; doCheck = false; } - { name = "mysqli"; - internalDeps = [ php.extensions.mysqlnd ]; - configureFlags = [ "--with-mysqli=mysqlnd" "--with-mysql-sock=/run/mysqld/mysqld.sock" ]; - doCheck = false; } - { name = "mysqlnd"; - buildInputs = [ zlib openssl ]; - # The configure script doesn't correctly add library link - # flags, so we add them to the variable used by the Makefile - # when linking. - MYSQLND_SHARED_LIBADD = "-lssl -lcrypto"; - # The configure script builds a config.h which is never - # included. Let's include it in the main header file - # included by all .c-files. - patches = [ - (pkgs.writeText "mysqlnd_config.patch" '' - --- a/ext/mysqlnd/mysqlnd.h - +++ b/ext/mysqlnd/mysqlnd.h - @@ -1,3 +1,6 @@ - +#ifdef HAVE_CONFIG_H - +#include "config.h" - +#endif - /* - +----------------------------------------------------------------------+ - | Copyright (c) The PHP Group | - '') - ] ++ lib.optionals (lib.versionOlder php.version "7.4.8") [ - (pkgs.writeText "mysqlnd_fix_compression.patch" '' - --- a/ext/mysqlnd/mysqlnd.h - +++ b/ext/mysqlnd/mysqlnd.h - @@ -48,7 +48,7 @@ - #define MYSQLND_DBG_ENABLED 0 - #endif + # This list contains build instructions for different modules that one may + # want to build. + # + # These will be passed as arguments to mkExtension above. + extensionData = [ + { name = "bcmath"; } + { name = "bz2"; buildInputs = [ bzip2 ]; configureFlags = [ "--with-bz2=${bzip2.dev}" ]; } + { name = "calendar"; } + { name = "ctype"; } + { + name = "curl"; + buildInputs = [ curl ]; + configureFlags = [ "--with-curl=${curl.dev}" ]; + doCheck = false; + } + { name = "dba"; } + { + name = "dom"; + buildInputs = [ libxml2 ]; + patches = [ + # https://github.com/php/php-src/pull/7030 + (fetchpatch { + url = "https://github.com/php/php-src/commit/4cc261aa6afca2190b1b74de39c3caa462ec6f0b.patch"; + sha256 = "11qsdiwj1zmpfc2pgh6nr0sn7qa1nyjg4jwf69cgwnd57qfjcy4k"; + excludes = [ "ext/dom/tests/bug43364.phpt" "ext/dom/tests/bug80268.phpt" ]; + }) + ]; + # For some reason `patch` fails to remove these files correctly. + # Since `postPatch` is already used in `mkExtension`, we have to make it here. + preCheck = '' + rm tests/bug43364.phpt + rm tests/bug80268.phpt + ''; + configureFlags = [ "--enable-dom" ] + # Required to build on darwin. + ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; + } + { + name = "enchant"; + buildInputs = [ enchant1 ]; + configureFlags = [ "--with-enchant=${enchant1}" ]; + # enchant1 doesn't build on darwin. + enable = (!stdenv.isDarwin); + doCheck = false; + } + { name = "exif"; doCheck = false; } + { name = "ffi"; buildInputs = [ libffi ]; enable = lib.versionAtLeast php.version "7.4"; } + { name = "fileinfo"; buildInputs = [ pcre2 ]; } + { name = "filter"; buildInputs = [ pcre2 ]; } + { name = "ftp"; buildInputs = [ openssl ]; } + { + name = "gd"; + buildInputs = [ zlib gd ]; + configureFlags = [ + "--enable-gd" + "--with-external-gd=${gd.dev}" + "--enable-gd-jis-conv" + ]; + doCheck = false; + enable = lib.versionAtLeast php.version "7.4"; + } + { + name = "gd"; + buildInputs = [ zlib gd libXpm ]; + configureFlags = [ + "--with-gd=${gd.dev}" + "--with-freetype-dir=${freetype.dev}" + "--with-jpeg-dir=${libjpeg.dev}" + "--with-png-dir=${libpng.dev}" + "--with-webp-dir=${libwebp}" + "--with-xpm-dir=${libXpm.dev}" + "--with-zlib-dir=${zlib.dev}" + "--enable-gd-jis-conv" + ]; + doCheck = false; + enable = lib.versionOlder php.version "7.4"; + } + { + name = "gettext"; + buildInputs = [ gettext ]; + patches = lib.optionals (lib.versionOlder php.version "7.4") [ + (fetchpatch { + url = "https://github.com/php/php-src/commit/632b6e7aac207194adc3d0b41615bfb610757f41.patch"; + sha256 = "0xn3ivhc4p070vbk5yx0mzj2n7p04drz3f98i77amr51w0vzv046"; + }) + ]; + postPhpize = ''substituteInPlace configure --replace 'as_fn_error $? "Cannot locate header file libintl.h" "$LINENO" 5' ':' ''; + configureFlags = [ "--with-gettext=${gettext}" ]; + } + { + name = "gmp"; + buildInputs = [ gmp ]; + configureFlags = [ "--with-gmp=${gmp.dev}" ]; + } + { name = "hash"; enable = lib.versionOlder php.version "7.4"; } + { + name = "iconv"; + configureFlags = [ + "--with-iconv${lib.optionalString stdenv.isDarwin "=${libiconv}"}" + ]; + patches = lib.optionals (lib.versionOlder php.version "8.0") [ + # Header path defaults to FHS location, preventing the configure script from detecting errno support. + (fetchpatch { + url = "https://github.com/fossar/nix-phps/raw/263861a8c9bdafd7abe44db6db4ef0179643680c/pkgs/iconv-header-path.patch"; + sha256 = "7GHnEUu+hcsQ4h3itDwk6p46ZKfib9JZ2XpWlXrdn6E="; + }) + ]; + doCheck = false; + } + { + name = "imap"; + buildInputs = [ uwimap openssl pam pcre2 ]; + configureFlags = [ "--with-imap=${uwimap}" "--with-imap-ssl" ]; + # uwimap doesn't build on darwin. + enable = (!stdenv.isDarwin); + } + { + name = "intl"; + buildInputs = [ icu64 ]; + patches = lib.optionals (lib.versionOlder php.version "7.4") [ + (fetchpatch { + url = "https://github.com/php/php-src/commit/93a9b56c90c334896e977721bfb3f38b1721cec6.patch"; + sha256 = "055l40lpyhb0rbjn6y23qkzdhvpp7inbnn6x13cpn4inmhjqfpg4"; + }) + ]; + } + { name = "json"; enable = lib.versionOlder php.version "8.0"; } + { + name = "ldap"; + buildInputs = [ openldap cyrus_sasl ]; + configureFlags = [ + "--with-ldap" + "LDAP_DIR=${openldap.dev}" + "LDAP_INCDIR=${openldap.dev}/include" + "LDAP_LIBDIR=${openldap.out}/lib" + ] ++ lib.optionals stdenv.isLinux [ + "--with-ldap-sasl=${cyrus_sasl.dev}" + ]; + doCheck = false; + } + { + name = "mbstring"; + buildInputs = [ oniguruma ] ++ lib.optionals (lib.versionAtLeast php.version "8.0") [ + pcre2 + ]; + doCheck = false; + } + { + name = "mysqli"; + internalDeps = [ php.extensions.mysqlnd ]; + configureFlags = [ "--with-mysqli=mysqlnd" "--with-mysql-sock=/run/mysqld/mysqld.sock" ]; + doCheck = false; + } + { + name = "mysqlnd"; + buildInputs = [ zlib openssl ]; + # The configure script doesn't correctly add library link + # flags, so we add them to the variable used by the Makefile + # when linking. + MYSQLND_SHARED_LIBADD = "-lssl -lcrypto"; + # The configure script builds a config.h which is never + # included. Let's include it in the main header file + # included by all .c-files. + patches = [ + (pkgs.writeText "mysqlnd_config.patch" '' + --- a/ext/mysqlnd/mysqlnd.h + +++ b/ext/mysqlnd/mysqlnd.h + @@ -1,3 +1,6 @@ + +#ifdef HAVE_CONFIG_H + +#include "config.h" + +#endif + /* + +----------------------------------------------------------------------+ + | Copyright (c) The PHP Group | + '') + ] ++ lib.optionals (lib.versionOlder php.version "7.4.8") [ + (pkgs.writeText "mysqlnd_fix_compression.patch" '' + --- a/ext/mysqlnd/mysqlnd.h + +++ b/ext/mysqlnd/mysqlnd.h + @@ -48,7 +48,7 @@ + #define MYSQLND_DBG_ENABLED 0 + #endif - -#if defined(MYSQLND_COMPRESSION_WANTED) && defined(HAVE_ZLIB) - +#if defined(MYSQLND_COMPRESSION_WANTED) - #define MYSQLND_COMPRESSION_ENABLED 1 - #endif - '') - ]; - postPhpize = lib.optionalString (lib.versionOlder php.version "7.4") '' - substituteInPlace configure --replace '$OPENSSL_LIBDIR' '${openssl}/lib' \ - --replace '$OPENSSL_INCDIR' '${openssl.dev}/include' - ''; } - # oci8 (7.4, 7.3, 7.2) - # odbc (7.4, 7.3, 7.2) - { name = "opcache"; - buildInputs = [ pcre2 ] ++ lib.optionals (!stdenv.isDarwin && lib.versionAtLeast php.version "8.0") [ - valgrind.dev - ]; - patches = lib.optionals (lib.versionOlder php.version "7.4") [ - (pkgs.writeText "zend_file_cache_config.patch" '' - --- a/ext/opcache/zend_file_cache.c - +++ b/ext/opcache/zend_file_cache.c - @@ -27,9 +27,9 @@ - #include "ext/standard/md5.h" - #endif + -#if defined(MYSQLND_COMPRESSION_WANTED) && defined(HAVE_ZLIB) + +#if defined(MYSQLND_COMPRESSION_WANTED) + #define MYSQLND_COMPRESSION_ENABLED 1 + #endif + '') + ]; + postPhpize = lib.optionalString (lib.versionOlder php.version "7.4") '' + substituteInPlace configure --replace '$OPENSSL_LIBDIR' '${openssl}/lib' \ + --replace '$OPENSSL_INCDIR' '${openssl.dev}/include' + ''; + } + # oci8 (7.4, 7.3, 7.2) + # odbc (7.4, 7.3, 7.2) + { + name = "opcache"; + buildInputs = [ pcre2 ] ++ lib.optionals (!stdenv.isDarwin && lib.versionAtLeast php.version "8.0") [ + valgrind.dev + ]; + patches = lib.optionals (lib.versionOlder php.version "7.4") [ + (pkgs.writeText "zend_file_cache_config.patch" '' + --- a/ext/opcache/zend_file_cache.c + +++ b/ext/opcache/zend_file_cache.c + @@ -27,9 +27,9 @@ + #include "ext/standard/md5.h" + #endif - +#include "ZendAccelerator.h" - #ifdef HAVE_OPCACHE_FILE_CACHE + +#include "ZendAccelerator.h" + #ifdef HAVE_OPCACHE_FILE_CACHE - -#include "ZendAccelerator.h" - #include "zend_file_cache.h" - #include "zend_shared_alloc.h" - #include "zend_accelerator_util_funcs.h" - '') ]; - zendExtension = true; - doCheck = !(lib.versionOlder php.version "7.4"); - # Tests launch the builtin webserver. - __darwinAllowLocalNetworking = true; } - { name = "openssl"; - buildInputs = [ openssl ]; - configureFlags = [ "--with-openssl" ]; - doCheck = false; } - { name = "pcntl"; } - { name = "pdo"; doCheck = false; } - { name = "pdo_dblib"; - internalDeps = [ php.extensions.pdo ]; - configureFlags = [ "--with-pdo-dblib=${freetds}" ]; - # Doesn't seem to work on darwin. - enable = (!stdenv.isDarwin); - doCheck = false; } - # pdo_firebird (7.4, 7.3, 7.2) - { name = "pdo_mysql"; - internalDeps = with php.extensions; [ pdo mysqlnd ]; - configureFlags = [ "--with-pdo-mysql=mysqlnd" "PHP_MYSQL_SOCK=/run/mysqld/mysqld.sock" ]; - doCheck = false; } - # pdo_oci (7.4, 7.3, 7.2) - { name = "pdo_odbc"; - internalDeps = [ php.extensions.pdo ]; - configureFlags = [ "--with-pdo-odbc=unixODBC,${unixODBC}" ]; - doCheck = false; } - { name = "pdo_pgsql"; - internalDeps = [ php.extensions.pdo ]; - configureFlags = [ "--with-pdo-pgsql=${postgresql}" ]; - doCheck = false; } - { name = "pdo_sqlite"; - internalDeps = [ php.extensions.pdo ]; - buildInputs = [ sqlite ]; - configureFlags = [ "--with-pdo-sqlite=${sqlite.dev}" ]; - doCheck = false; } - { name = "pgsql"; - buildInputs = [ pcre2 ]; - configureFlags = [ "--with-pgsql=${postgresql}" ]; - doCheck = false; } - { name = "posix"; doCheck = false; } - { name = "pspell"; configureFlags = [ "--with-pspell=${aspell}" ]; } - { name = "readline"; - buildInputs = [ libedit readline ]; - configureFlags = [ "--with-readline=${readline.dev}" ]; - postPhpize = lib.optionalString (lib.versionOlder php.version "7.4") '' - substituteInPlace configure --replace 'as_fn_error $? "Please reinstall libedit - I cannot find readline.h" "$LINENO" 5' ':' - ''; - doCheck = false; - } - { name = "session"; doCheck = !(lib.versionAtLeast php.version "8.0"); } - { name = "shmop"; } - { name = "simplexml"; - buildInputs = [ libxml2 pcre2 ]; - configureFlags = [ "--enable-simplexml" ] - # Required to build on darwin. - ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; } - { name = "snmp"; - buildInputs = [ net-snmp openssl ]; - configureFlags = [ "--with-snmp" ]; - # net-snmp doesn't build on darwin. - enable = (!stdenv.isDarwin); - doCheck = false; } - { name = "soap"; - buildInputs = [ libxml2 ]; - configureFlags = [ "--enable-soap" ] - # Required to build on darwin. - ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; - doCheck = false; } - { name = "sockets"; doCheck = false; } - { name = "sodium"; buildInputs = [ libsodium ]; } - { name = "sqlite3"; buildInputs = [ sqlite ]; } - { name = "sysvmsg"; } - { name = "sysvsem"; } - { name = "sysvshm"; } - { name = "tidy"; configureFlags = [ "--with-tidy=${html-tidy}" ]; doCheck = false; } - { name = "tokenizer"; } - { name = "wddx"; - buildInputs = [ libxml2 ]; - internalDeps = [ php.extensions.session ]; - configureFlags = [ "--enable-wddx" "--with-libxml-dir=${libxml2.dev}" ]; - # Removed in php 7.4. - enable = lib.versionOlder php.version "7.4"; } - { name = "xml"; - buildInputs = [ libxml2 ]; - configureFlags = [ "--enable-xml" ] - # Required to build on darwin. - ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; - doCheck = false; } - { name = "xmlreader"; - buildInputs = [ libxml2 ]; - internalDeps = [ php.extensions.dom ]; - NIX_CFLAGS_COMPILE = [ "-I../.." "-DHAVE_DOM" ]; - configureFlags = [ "--enable-xmlreader" ] - # Required to build on darwin. - ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; } - { name = "xmlrpc"; - buildInputs = [ libxml2 libiconv ]; - # xmlrpc was unbundled in 8.0 https://php.watch/versions/8.0/xmlrpc - enable = lib.versionOlder php.version "8.0"; - configureFlags = [ "--with-xmlrpc" ] - # Required to build on darwin. - ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; } - { name = "xmlwriter"; - buildInputs = [ libxml2 ]; - configureFlags = [ "--enable-xmlwriter" ] - # Required to build on darwin. - ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; } - { name = "xsl"; - buildInputs = [ libxslt libxml2 ]; - doCheck = lib.versionOlder php.version "8.0"; - configureFlags = [ "--with-xsl=${libxslt.dev}" ]; } - { name = "zend_test"; } - { name = "zip"; - buildInputs = [ libzip pcre2 ]; - configureFlags = [ "--with-zip" ] - ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-zlib-dir=${zlib.dev}" ] - ++ lib.optionals (lib.versionOlder php.version "7.3") [ "--with-libzip" ]; - doCheck = false; } - { name = "zlib"; - buildInputs = [ zlib ]; - patches = lib.optionals (lib.versionOlder php.version "7.4") [ - # Derived from https://github.com/php/php-src/commit/f16b012116d6c015632741a3caada5b30ef8a699 - ../development/interpreters/php/zlib-darwin-tests.patch - ]; - configureFlags = [ "--with-zlib" ] - ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-zlib-dir=${zlib.dev}" ]; } - ]; + -#include "ZendAccelerator.h" + #include "zend_file_cache.h" + #include "zend_shared_alloc.h" + #include "zend_accelerator_util_funcs.h" + '') + ]; + zendExtension = true; + doCheck = !(lib.versionOlder php.version "7.4"); + # Tests launch the builtin webserver. + __darwinAllowLocalNetworking = true; + } + { + name = "openssl"; + buildInputs = [ openssl ]; + configureFlags = [ "--with-openssl" ]; + doCheck = false; + } + { name = "pcntl"; } + { name = "pdo"; doCheck = false; } + { + name = "pdo_dblib"; + internalDeps = [ php.extensions.pdo ]; + configureFlags = [ "--with-pdo-dblib=${freetds}" ]; + # Doesn't seem to work on darwin. + enable = (!stdenv.isDarwin); + doCheck = false; + } + # pdo_firebird (7.4, 7.3, 7.2) + { + name = "pdo_mysql"; + internalDeps = with php.extensions; [ pdo mysqlnd ]; + configureFlags = [ "--with-pdo-mysql=mysqlnd" "PHP_MYSQL_SOCK=/run/mysqld/mysqld.sock" ]; + doCheck = false; + } + # pdo_oci (7.4, 7.3, 7.2) + { + name = "pdo_odbc"; + internalDeps = [ php.extensions.pdo ]; + configureFlags = [ "--with-pdo-odbc=unixODBC,${unixODBC}" ]; + doCheck = false; + } + { + name = "pdo_pgsql"; + internalDeps = [ php.extensions.pdo ]; + configureFlags = [ "--with-pdo-pgsql=${postgresql}" ]; + doCheck = false; + } + { + name = "pdo_sqlite"; + internalDeps = [ php.extensions.pdo ]; + buildInputs = [ sqlite ]; + configureFlags = [ "--with-pdo-sqlite=${sqlite.dev}" ]; + doCheck = false; + } + { + name = "pgsql"; + buildInputs = [ pcre2 ]; + configureFlags = [ "--with-pgsql=${postgresql}" ]; + doCheck = false; + } + { name = "posix"; doCheck = false; } + { name = "pspell"; configureFlags = [ "--with-pspell=${aspell}" ]; } + { + name = "readline"; + buildInputs = [ libedit readline ]; + configureFlags = [ "--with-readline=${readline.dev}" ]; + postPhpize = lib.optionalString (lib.versionOlder php.version "7.4") '' + substituteInPlace configure --replace 'as_fn_error $? "Please reinstall libedit - I cannot find readline.h" "$LINENO" 5' ':' + ''; + doCheck = false; + } + { name = "session"; doCheck = !(lib.versionAtLeast php.version "8.0"); } + { name = "shmop"; } + { + name = "simplexml"; + buildInputs = [ libxml2 pcre2 ]; + configureFlags = [ "--enable-simplexml" ] + # Required to build on darwin. + ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; + } + { + name = "snmp"; + buildInputs = [ net-snmp openssl ]; + configureFlags = [ "--with-snmp" ]; + # net-snmp doesn't build on darwin. + enable = (!stdenv.isDarwin); + doCheck = false; + } + { + name = "soap"; + buildInputs = [ libxml2 ]; + configureFlags = [ "--enable-soap" ] + # Required to build on darwin. + ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; + doCheck = false; + } + { name = "sockets"; doCheck = false; } + { name = "sodium"; buildInputs = [ libsodium ]; } + { name = "sqlite3"; buildInputs = [ sqlite ]; } + { name = "sysvmsg"; } + { name = "sysvsem"; } + { name = "sysvshm"; } + { name = "tidy"; configureFlags = [ "--with-tidy=${html-tidy}" ]; doCheck = false; } + { name = "tokenizer"; } + { + name = "wddx"; + buildInputs = [ libxml2 ]; + internalDeps = [ php.extensions.session ]; + configureFlags = [ "--enable-wddx" "--with-libxml-dir=${libxml2.dev}" ]; + # Removed in php 7.4. + enable = lib.versionOlder php.version "7.4"; + } + { + name = "xml"; + buildInputs = [ libxml2 ]; + configureFlags = [ "--enable-xml" ] + # Required to build on darwin. + ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; + doCheck = false; + } + { + name = "xmlreader"; + buildInputs = [ libxml2 ]; + internalDeps = [ php.extensions.dom ]; + NIX_CFLAGS_COMPILE = [ "-I../.." "-DHAVE_DOM" ]; + configureFlags = [ "--enable-xmlreader" ] + # Required to build on darwin. + ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; + } + { + name = "xmlrpc"; + buildInputs = [ libxml2 libiconv ]; + # xmlrpc was unbundled in 8.0 https://php.watch/versions/8.0/xmlrpc + enable = lib.versionOlder php.version "8.0"; + configureFlags = [ "--with-xmlrpc" ] + # Required to build on darwin. + ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; + } + { + name = "xmlwriter"; + buildInputs = [ libxml2 ]; + configureFlags = [ "--enable-xmlwriter" ] + # Required to build on darwin. + ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-libxml-dir=${libxml2.dev}" ]; + } + { + name = "xsl"; + buildInputs = [ libxslt libxml2 ]; + doCheck = lib.versionOlder php.version "8.0"; + configureFlags = [ "--with-xsl=${libxslt.dev}" ]; + } + { name = "zend_test"; } + { + name = "zip"; + buildInputs = [ libzip pcre2 ]; + configureFlags = [ "--with-zip" ] + ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-zlib-dir=${zlib.dev}" ] + ++ lib.optionals (lib.versionOlder php.version "7.3") [ "--with-libzip" ]; + doCheck = false; + } + { + name = "zlib"; + buildInputs = [ zlib ]; + patches = lib.optionals (lib.versionOlder php.version "7.4") [ + # Derived from https://github.com/php/php-src/commit/f16b012116d6c015632741a3caada5b30ef8a699 + ../development/interpreters/php/zlib-darwin-tests.patch + ]; + configureFlags = [ "--with-zlib" ] + ++ lib.optionals (lib.versionOlder php.version "7.4") [ "--with-zlib-dir=${zlib.dev}" ]; + } + ]; - # Convert the list of attrs: - # [ { name = ; ... } ... ] - # to a list of - # [ { name = ; value = ; } ... ] - # - # which we later use listToAttrs to make all attrs available by name. - # - # Also filter out extensions based on the enable property. - namedExtensions = builtins.map (drv: { - name = drv.name; - value = mkExtension drv; - }) (builtins.filter (i: i.enable or true) extensionData); + # Convert the list of attrs: + # [ { name = ; ... } ... ] + # to a list of + # [ { name = ; value = ; } ... ] + # + # which we later use listToAttrs to make all attrs available by name. + # + # Also filter out extensions based on the enable property. + namedExtensions = builtins.map + (drv: { + name = drv.name; + value = mkExtension drv; + }) + (builtins.filter (i: i.enable or true) extensionData); - # Produce the final attribute set of all extensions defined. - in builtins.listToAttrs namedExtensions); + # Produce the final attribute set of all extensions defined. + in + builtins.listToAttrs namedExtensions + ); }) diff --git a/third_party/nixpkgs/pkgs/top-level/python-aliases.nix b/third_party/nixpkgs/pkgs/top-level/python-aliases.nix index f11a9dc3c0..b796d9ac44 100644 --- a/third_party/nixpkgs/pkgs/top-level/python-aliases.nix +++ b/third_party/nixpkgs/pkgs/top-level/python-aliases.nix @@ -33,9 +33,27 @@ in ### Deprecated aliases - for backward compatibility mapAliases ({ - smart_open = smart-open; # added 2021-03-14 + blockdiagcontrib-cisco = throw "blockdiagcontrib-cisco is not compatible with blockdiag 2.0.0 and has been removed."; # Added 2020-11-29 + bugseverywhere = throw "bugseverywhere has been removed: Abandoned by upstream."; # Added 2019-11-27 + detox = throw "detox is no longer maintained, and was broken since may 2019"; # added 2020-07-04 + dns = dnspython; # Alias for compatibility, 2017-12-10 + faulthandler = throw "faulthandler is built into ${python.executable}"; + gitdb2 = throw "gitdb2 has been deprecated, use gitdb instead."; # added 2020-03-14 + glances = throw "glances has moved to pkgs.glances"; # added 2020-20-28 google_api_python_client = google-api-python-client; # added 2021-03-19 googleapis_common_protos = googleapis-common-protos; # added 2021-03-19 + HAP-python = hap-python; # added 2021-06-01 MechanicalSoup = mechanicalsoup; # added 2021-06-01 + privacyidea = throw "renamed to pkgs.privacyidea"; # added 2021-06-20 + pylibgen = throw "pylibgen is unmaintained upstreamed, and removed from nixpkgs"; # added 2020-06-20 + pymssql = throw "pymssql has been abandoned upstream."; # added 2020-05-04 + pytest-pep8 = pytestpep8; # added 2021-01-04 + pytestpep8 = throw "pytestpep8 was removed because it is abandoned and no longer compatible with pytest v6.0"; # added 2020-12-10 + qasm2image = throw "qasm2image is no longer maintained (since November 2018), and is not compatible with the latest pythonPackages.qiskit versions."; # added 2020-12-09 + selectors34 = throw "selectors34 has been removed: functionality provided by Python itself; archived by upstream."; # Added 2021-06-10 setuptools_scm = setuptools-scm; # added 2021-06-03 + smart_open = smart-open; # added 2021-03-14 + smmap2 = throw "smmap2 has been deprecated, use smmap instead."; # added 2020-03-14 + topydo = throw "python3Packages.topydo was moved to topydo"; # 2017-09-22 + websocket_client = websocket-client; }) diff --git a/third_party/nixpkgs/pkgs/top-level/python-packages.nix b/third_party/nixpkgs/pkgs/top-level/python-packages.nix index 35935450e2..143b8dc2bd 100644 --- a/third_party/nixpkgs/pkgs/top-level/python-packages.nix +++ b/third_party/nixpkgs/pkgs/top-level/python-packages.nix @@ -207,6 +207,8 @@ in { advantage-air = callPackage ../development/python-modules/advantage-air { }; + aemet-opendata = callPackage ../development/python-modules/aemet-opendata { }; + aenum = callPackage ../development/python-modules/aenum { }; afdko = callPackage ../development/python-modules/afdko { }; @@ -223,6 +225,14 @@ in { agent-py = callPackage ../development/python-modules/agent-py { }; + aio-geojson-client = callPackage ../development/python-modules/aio-geojson-client { }; + + aio-geojson-geonetnz-quakes = callPackage ../development/python-modules/aio-geojson-geonetnz-quakes { }; + + aio-geojson-geonetnz-volcano = callPackage ../development/python-modules/aio-geojson-geonetnz-volcano { }; + + aio-geojson-nsw-rfs-incidents = callPackage ../development/python-modules/aio-geojson-nsw-rfs-incidents { }; + aio-georss-client = callPackage ../development/python-modules/aio-georss-client { }; aio-georss-gdacs = callPackage ../development/python-modules/aio-georss-gdacs { }; @@ -235,6 +245,8 @@ in { aioasuswrt = callPackage ../development/python-modules/aioasuswrt { }; + aioazuredevops = callPackage ../development/python-modules/aioazuredevops { }; + aiocache = callPackage ../development/python-modules/aiocache { }; aiocoap = callPackage ../development/python-modules/aiocoap { }; @@ -309,6 +321,8 @@ in { aiolyric = callPackage ../development/python-modules/aiolyric { }; + aiomodernforms = callPackage ../development/python-modules/aiomodernforms { }; + aiomultiprocess = callPackage ../development/python-modules/aiomultiprocess { }; aiomysql = callPackage ../development/python-modules/aiomysql { }; @@ -353,6 +367,8 @@ in { aiosyncthing = callPackage ../development/python-modules/aiosyncthing { }; + aiotractive = callPackage ../development/python-modules/aiotractive { }; + aiounifi = callPackage ../development/python-modules/aiounifi { }; aiounittest = callPackage ../development/python-modules/aiounittest { }; @@ -371,6 +387,8 @@ in { alabaster = callPackage ../development/python-modules/alabaster { }; + aladdin-connect = callPackage ../development/python-modules/aladdin-connect { }; + alarmdecoder = callPackage ../development/python-modules/alarmdecoder { }; alembic = callPackage ../development/python-modules/alembic { }; @@ -381,10 +399,14 @@ in { alot = callPackage ../development/python-modules/alot { }; + alpha-vantage = callPackage ../development/python-modules/alpha-vantage { }; + altair = callPackage ../development/python-modules/altair { }; amazon_kclpy = callPackage ../development/python-modules/amazon_kclpy { }; + ambee = callPackage ../development/python-modules/ambee { }; + ambiclimate = callPackage ../development/python-modules/ambiclimate { }; amcrest = callPackage ../development/python-modules/amcrest { }; @@ -423,8 +445,6 @@ in { ansible-base = callPackage ../development/python-modules/ansible/base.nix { }; - ansible-collections = callPackage ../development/python-modules/ansible/collections.nix { }; - ansible-core = callPackage ../development/python-modules/ansible/core.nix { }; ansible-kernel = callPackage ../development/python-modules/ansible-kernel { }; @@ -447,6 +467,8 @@ in { inherit (pkgs) antlr4; }; + anyascii = callPackage ../development/python-modules/anyascii { }; + anyio = callPackage ../development/python-modules/anyio { }; anyjson = callPackage ../development/python-modules/anyjson { }; @@ -475,6 +497,8 @@ in { apptools = callPackage ../development/python-modules/apptools { }; + aprslib = callPackage ../development/python-modules/aprslib { }; + APScheduler = callPackage ../development/python-modules/APScheduler { }; apsw = callPackage ../development/python-modules/apsw { }; @@ -483,6 +507,8 @@ in { arabic-reshaper = callPackage ../development/python-modules/arabic-reshaper { }; + arcam-fmj = callPackage ../development/python-modules/arcam-fmj { }; + archinfo = callPackage ../development/python-modules/archinfo { }; area = callPackage ../development/python-modules/area { }; @@ -563,6 +589,8 @@ in { async-dns = callPackage ../development/python-modules/async-dns { }; + async-lru = callPackage ../development/python-modules/async-lru { }; + asyncio-dgram = callPackage ../development/python-modules/asyncio-dgram { }; asyncio-mqtt = callPackage ../development/python-modules/asyncio_mqtt { }; @@ -707,6 +735,8 @@ in { azure-eventgrid = callPackage ../development/python-modules/azure-eventgrid { }; + azure-eventhub = callPackage ../development/python-modules/azure-eventhub { }; + azure-functions-devops-build = callPackage ../development/python-modules/azure-functions-devops-build { }; azure-graphrbac = callPackage ../development/python-modules/azure-graphrbac { }; @@ -1035,6 +1065,8 @@ in { billiard = callPackage ../development/python-modules/billiard { }; + bimmer-connected = callPackage ../development/python-modules/bimmer-connected { }; + binaryornot = callPackage ../development/python-modules/binaryornot { }; binho-host-adapter = callPackage ../development/python-modules/binho-host-adapter { }; @@ -1067,6 +1099,10 @@ in { bitstruct = callPackage ../development/python-modules/bitstruct { }; + bitvavo-aio = callPackage ../development/python-modules/bitvavo-aio { }; + + bizkaibus = callPackage ../development/python-modules/bizkaibus { }; + bjoern = callPackage ../development/python-modules/bjoern { }; bkcharts = callPackage ../development/python-modules/bkcharts { }; @@ -1079,12 +1115,16 @@ in { bleak = callPackage ../development/python-modules/bleak { }; + blebox-uniapi = callPackage ../development/python-modules/blebox-uniapi { }; + blessed = callPackage ../development/python-modules/blessed { }; blessings = callPackage ../development/python-modules/blessings { }; blinker = callPackage ../development/python-modules/blinker { }; + blinkpy = callPackage ../development/python-modules/blinkpy { }; + BlinkStick = callPackage ../development/python-modules/blinkstick { }; blis = callPackage ../development/python-modules/blis { }; @@ -1095,8 +1135,6 @@ in { blockdiag = callPackage ../development/python-modules/blockdiag { }; - blockdiagcontrib-cisco = throw "blockdiagcontrib-cisco is not compatible with blockdiag 2.0.0 and has been removed."; # Added 2020-11-29 - block-io = callPackage ../development/python-modules/block-io { }; blspy = callPackage ../development/python-modules/blspy { }; @@ -1105,6 +1143,8 @@ in { bluepy-devices = callPackage ../development/python-modules/bluepy-devices { }; + blurhash = callPackage ../development/python-modules/blurhash { }; + bme680 = callPackage ../development/python-modules/bme680 { }; bokeh = callPackage ../development/python-modules/bokeh { }; @@ -1113,6 +1153,8 @@ in { boltztrap2 = callPackage ../development/python-modules/boltztrap2 { }; + bond-api = callPackage ../development/python-modules/bond-api { }; + booleanoperations = callPackage ../development/python-modules/booleanoperations { }; boolean-py = callPackage ../development/python-modules/boolean-py { }; @@ -1124,6 +1166,12 @@ in { enablePython = true; }); + boschshcpy = callPackage ../development/python-modules/boschshcpy { }; + + boost-histogram = callPackage ../development/python-modules/boost-histogram { + inherit (pkgs) boost; + }; + boto3 = callPackage ../development/python-modules/boto3 { }; boto = callPackage ../development/python-modules/boto { }; @@ -1176,8 +1224,6 @@ in { btrfs = callPackage ../development/python-modules/btrfs { }; - bugseverywhere = throw "bugseverywhere has been removed: Abandoned by upstream."; # Added 2019-11-27 - bugsnag = callPackage ../development/python-modules/bugsnag { }; bugwarrior = callPackage ../development/python-modules/bugwarrior { }; @@ -1186,6 +1232,8 @@ in { bugzilla = callPackage ../development/python-modules/bugzilla { }; + buienradar = callPackage ../development/python-modules/buienradar { }; + buildbot = callPackage ../development/python-modules/buildbot { }; buildbot-ui = self.buildbot.withPlugins (with self.buildbot-plugins; [ www ]); @@ -1237,6 +1285,8 @@ in { caldav = callPackage ../development/python-modules/caldav { }; + calmjs-parse = callPackage ../development/python-modules/calmjs-parse { }; + can = callPackage ../development/python-modules/can { }; canmatrix = callPackage ../development/python-modules/canmatrix { }; @@ -1291,6 +1341,8 @@ in { connect-box = callPackage ../development/python-modules/connect_box { }; + connection-pool = callPackage ../development/python-modules/connection-pool { }; + coqpit = callPackage ../development/python-modules/coqpit { }; cerberus = callPackage ../development/python-modules/cerberus { }; @@ -1529,6 +1581,8 @@ in { colorspacious = callPackage ../development/python-modules/colorspacious { }; + colorthief = callPackage ../development/python-modules/colorthief { }; + colour = callPackage ../development/python-modules/colour { }; commandparse = callPackage ../development/python-modules/commandparse { }; @@ -1845,8 +1899,6 @@ in { desktop-notifier = callPackage ../development/python-modules/desktop-notifier { }; - detox = throw "detox is no longer maintained, and was broken since may 2019"; # added 2020-07-04 - devolo-home-control-api = callPackage ../development/python-modules/devolo-home-control-api { }; devpi-common = callPackage ../development/python-modules/devpi-common { }; @@ -1863,6 +1915,8 @@ in { dictionaries = callPackage ../development/python-modules/dictionaries { }; + dictpath = callPackage ../development/python-modules/dictpath { }; + dicttoxml = callPackage ../development/python-modules/dicttoxml { }; diff_cover = callPackage ../development/python-modules/diff_cover { }; @@ -1879,6 +1933,8 @@ in { dipy = callPackage ../development/python-modules/dipy { }; + directv = callPackage ../development/python-modules/directv { }; + discid = callPackage ../development/python-modules/discid { }; discogs_client = callPackage ../development/python-modules/discogs_client { }; @@ -2058,10 +2114,6 @@ in { dnspython = callPackage ../development/python-modules/dnspython { }; - dnspython_1 = callPackage ../development/python-modules/dnspython/1.nix { }; - - dns = self.dnspython; # Alias for compatibility, 2017-12-10 - doc8 = callPackage ../development/python-modules/doc8 { }; docker = callPackage ../development/python-modules/docker { }; @@ -2102,6 +2154,8 @@ in { dominate = callPackage ../development/python-modules/dominate { }; + doorbirdpy = callPackage ../development/python-modules/doorbirdpy { }; + dopy = callPackage ../development/python-modules/dopy { }; dotty-dict = callPackage ../development/python-modules/dotty-dict { }; @@ -2112,6 +2166,8 @@ in { dotmap = callPackage ../development/python-modules/dotmap { }; + downloader-cli = callPackage ../development/python-modules/downloader-cli { }; + dparse = callPackage ../development/python-modules/dparse { }; dpath = callPackage ../development/python-modules/dpath { }; @@ -2136,6 +2192,8 @@ in { dsmr-parser = callPackage ../development/python-modules/dsmr-parser { }; + dtlssocket = callPackage ../development/python-modules/dtlssocket { }; + duckdb = callPackage ../development/python-modules/duckdb { inherit (pkgs) duckdb; }; @@ -2175,6 +2233,8 @@ in { ecdsa = callPackage ../development/python-modules/ecdsa { }; + ecoaliface = callPackage ../development/python-modules/ecoaliface { }; + ecos = callPackage ../development/python-modules/ecos { }; ecpy = callPackage ../development/python-modules/ecpy { }; @@ -2187,10 +2247,14 @@ in { edward = callPackage ../development/python-modules/edward { }; + eebrightbox = callPackage ../development/python-modules/eebrightbox { }; + effect = callPackage ../development/python-modules/effect { }; eggdeps = callPackage ../development/python-modules/eggdeps { }; + elgato = callPackage ../development/python-modules/elgato { }; + elasticsearch = callPackage ../development/python-modules/elasticsearch { }; elasticsearch-dsl = callPackage ../development/python-modules/elasticsearch-dsl { }; @@ -2215,10 +2279,14 @@ in { emoji = callPackage ../development/python-modules/emoji { }; + emulated-roku = callPackage ../development/python-modules/emulated-roku { }; + enaml = callPackage ../development/python-modules/enaml { }; enamlx = callPackage ../development/python-modules/enamlx { }; + enocean = callPackage ../development/python-modules/enocean { }; + enrich = callPackage ../development/python-modules/enrich { }; entrance = callPackage ../development/python-modules/entrance { @@ -2233,6 +2301,8 @@ in { entrypoints = callPackage ../development/python-modules/entrypoints { }; + enturclient = callPackage ../development/python-modules/enturclient { }; + enum34 = callPackage ../development/python-modules/enum34 { }; enum-compat = callPackage ../development/python-modules/enum-compat { }; @@ -2249,6 +2319,8 @@ in { ephem = callPackage ../development/python-modules/ephem { }; + epson-projector = callPackage ../development/python-modules/epson-projector { }; + eradicate = callPackage ../development/python-modules/eradicate { }; escapism = callPackage ../development/python-modules/escapism { }; @@ -2322,7 +2394,7 @@ in { bzip2 expat lz4 - lzma + xz zlib zstd; }; @@ -2396,8 +2468,6 @@ in { fasttext = callPackage ../development/python-modules/fasttext { }; - faulthandler = throw "faulthandler is built into ${python.executable}"; - favicon = callPackage ../development/python-modules/favicon { }; fb-re2 = callPackage ../development/python-modules/fb-re2 { }; @@ -2608,10 +2678,16 @@ in { fonttools = callPackage ../development/python-modules/fonttools { }; + foobot-async = callPackage ../development/python-modules/foobot-async { }; + foolscap = callPackage ../development/python-modules/foolscap { }; forbiddenfruit = callPackage ../development/python-modules/forbiddenfruit { }; + fordpass = callPackage ../development/python-modules/fordpass { }; + + forecast-solar = callPackage ../development/python-modules/forecast-solar { }; + fortiosapi = callPackage ../development/python-modules/fortiosapi { }; FormEncode = callPackage ../development/python-modules/FormEncode { }; @@ -2684,6 +2760,10 @@ in { pythonPackages = self; }); + garminconnect-aio = callPackage ../development/python-modules/garminconnect-aio { }; + + garminconnect-ha = callPackage ../development/python-modules/garminconnect-ha { }; + gast = callPackage ../development/python-modules/gast { }; garages-amsterdam = callPackage ../development/python-modules/garages-amsterdam { }; @@ -2786,27 +2866,26 @@ in { gin-config = callPackage ../development/python-modules/gin-config { }; + gios = callPackage ../development/python-modules/gios { }; + gipc = callPackage ../development/python-modules/gipc { }; git-annex-adapter = callPackage ../development/python-modules/git-annex-adapter { }; - gitdb2 = throw "gitdb2 has been deprecated, use gitdb instead."; # added 2020-03-14 - gitdb = callPackage ../development/python-modules/gitdb { }; github3_py = callPackage ../development/python-modules/github3_py { }; - github-webhook = callPackage ../development/python-modules/github-webhook { }; + github-to-sqlite = callPackage ../development/python-modules/github-to-sqlite { }; + github-webhook = callPackage ../development/python-modules/github-webhook { }; GitPython = callPackage ../development/python-modules/GitPython { }; git-revise = callPackage ../development/python-modules/git-revise { }; git-sweep = callPackage ../development/python-modules/git-sweep { }; - glances = throw "glances has moved to pkgs.glances"; # added 2020-20-28 - glances-api = callPackage ../development/python-modules/glances-api { }; glasgow = callPackage ../development/python-modules/glasgow { }; @@ -2831,6 +2910,8 @@ in { gnureadline = callPackage ../development/python-modules/gnureadline { }; + goalzero = callPackage ../development/python-modules/goalzero { }; + goobook = callPackage ../development/python-modules/goobook { }; goocalendar = callPackage ../development/python-modules/goocalendar { }; @@ -2849,6 +2930,8 @@ in { google-cloud-access-context-manager = callPackage ../development/python-modules/google-cloud-access-context-manager { }; + google-cloud-appengine-logging = callPackage ../development/python-modules/google-cloud-appengine-logging { }; + google-cloud-asset = callPackage ../development/python-modules/google-cloud-asset { }; google-cloud-automl = callPackage ../development/python-modules/google-cloud-automl { }; @@ -2857,6 +2940,8 @@ in { google-cloud-bigquery-datatransfer = callPackage ../development/python-modules/google-cloud-bigquery-datatransfer { }; + google-cloud-bigquery-logging = callPackage ../development/python-modules/google-cloud-bigquery-logging { }; + google-cloud-bigtable = callPackage ../development/python-modules/google-cloud-bigtable { }; google-cloud-container = callPackage ../development/python-modules/google-cloud-container { }; @@ -2877,6 +2962,8 @@ in { google-cloud-iam = callPackage ../development/python-modules/google-cloud-iam { }; + google-cloud-iam-logging = callPackage ../development/python-modules/google-cloud-iam-logging { }; + google-cloud-iot = callPackage ../development/python-modules/google-cloud-iot { }; google-cloud-kms = callPackage ../development/python-modules/google-cloud-kms { }; @@ -2937,6 +3024,8 @@ in { google-pasta = callPackage ../development/python-modules/google-pasta { }; + google-re2 = callPackage ../development/python-modules/google-re2 { }; + google-resumable-media = callPackage ../development/python-modules/google-resumable-media { }; googletrans = callPackage ../development/python-modules/googletrans { }; @@ -2994,6 +3083,8 @@ in { graphql-server-core = callPackage ../development/python-modules/graphql-server-core { }; + graphql-subscription-manager = callPackage ../development/python-modules/graphql-subscription-manager { }; + graph-tool = callPackage ../development/python-modules/graph-tool/2.x.x.nix { }; graphtage = callPackage ../development/python-modules/graphtage { }; @@ -3008,6 +3099,8 @@ in { greatfet = callPackage ../development/python-modules/greatfet { }; + greeclimate = callPackage ../development/python-modules/greeclimate { }; + green = callPackage ../development/python-modules/green { }; greenlet = callPackage ../development/python-modules/greenlet { }; @@ -3016,6 +3109,8 @@ in { gremlinpython = callPackage ../development/python-modules/gremlinpython { }; + growattserver = callPackage ../development/python-modules/growattserver { }; + grip = callPackage ../development/python-modules/grip { }; grpc_google_iam_v1 = callPackage ../development/python-modules/grpc_google_iam_v1 { }; @@ -3091,6 +3186,8 @@ in { habanero = callPackage ../development/python-modules/habanero { }; + habitipy = callPackage ../development/python-modules/habitipy { }; + hachoir = callPackage ../development/python-modules/hachoir { }; hdate = callPackage ../development/python-modules/hdate { }; @@ -3103,7 +3200,9 @@ in { handout = callPackage ../development/python-modules/handout { }; - HAP-python = callPackage ../development/python-modules/HAP-python { }; + hangups = callPackage ../development/python-modules/hangups { }; + + hap-python = callPackage ../development/python-modules/hap-python { }; hass-nabucasa = callPackage ../development/python-modules/hass-nabucasa { }; @@ -3135,6 +3234,8 @@ in { inherit python; }); + herepy = callPackage ../development/python-modules/herepy { }; + hetzner = callPackage ../development/python-modules/hetzner { }; heudiconv = callPackage ../development/python-modules/heudiconv { }; @@ -3145,6 +3246,10 @@ in { hickle = callPackage ../development/python-modules/hickle { }; + hid = callPackage ../development/python-modules/hid { + inherit (pkgs) hidapi; + }; + hidapi = callPackage ../development/python-modules/hidapi { inherit (pkgs) udev libusb1; }; @@ -3163,6 +3268,8 @@ in { hkdf = callPackage ../development/python-modules/hkdf { }; + hlk-sw16 = callPackage ../development/python-modules/hlk-sw16 { }; + hmmlearn = callPackage ../development/python-modules/hmmlearn { }; hocr-tools = callPackage ../development/python-modules/hocr-tools { }; @@ -3235,12 +3342,16 @@ in { httpx = callPackage ../development/python-modules/httpx { }; + huawei-lte-api = callPackage ../development/python-modules/huawei-lte-api { }; + huey = callPackage ../development/python-modules/huey { }; hug = callPackage ../development/python-modules/hug { }; huggingface-hub = callPackage ../development/python-modules/huggingface-hub { }; + huisbaasje-client = callPackage ../development/python-modules/huisbaasje-client { }; + humanfriendly = callPackage ../development/python-modules/humanfriendly { }; humanize = callPackage ../development/python-modules/humanize { }; @@ -3273,9 +3384,6 @@ in { hyperopt = callPackage ../development/python-modules/hyperopt { }; - # File name is called 2.nix because this one will need to remain for Python 2. - hypothesis_4 = callPackage ../development/python-modules/hypothesis/2.nix { }; - hypothesis-auto = callPackage ../development/python-modules/hypothesis-auto { }; hypothesis = callPackage ../development/python-modules/hypothesis { }; @@ -3312,6 +3420,8 @@ in { ics = callPackage ../development/python-modules/ics { }; + idasen = callPackage ../development/python-modules/idasen { }; + identify = callPackage ../development/python-modules/identify { }; idna = callPackage ../development/python-modules/idna { }; @@ -3400,6 +3510,10 @@ in { iniparse = callPackage ../development/python-modules/iniparse { }; + injector = callPackage ../development/python-modules/injector { }; + + inkex = callPackage ../development/python-modules/inkex { }; + inotify-simple = callPackage ../development/python-modules/inotify-simple { }; inquirer = callPackage ../development/python-modules/inquirer { }; @@ -3473,6 +3587,8 @@ in { iso3166 = callPackage ../development/python-modules/iso3166 { }; + ismartgate = callPackage ../development/python-modules/ismartgate { }; + iso-639 = callPackage ../development/python-modules/iso-639 { }; iso8601 = callPackage ../development/python-modules/iso8601 { }; @@ -3493,6 +3609,8 @@ in { itsdangerous = callPackage ../development/python-modules/itsdangerous { }; + itunespy = callPackage ../development/python-modules/itunespy { }; + itypes = callPackage ../development/python-modules/itypes { }; j2cli = callPackage ../development/python-modules/j2cli { }; @@ -3776,8 +3894,12 @@ in { kombu = callPackage ../development/python-modules/kombu { }; + konnected = callPackage ../development/python-modules/konnected { }; + korean-lunar-calendar = callPackage ../development/python-modules/korean-lunar-calendar { }; + krakenex = callPackage ../development/python-modules/krakenex { }; + kubernetes = callPackage ../development/python-modules/kubernetes { }; labelbox = callPackage ../development/python-modules/labelbox { }; @@ -3840,6 +3962,10 @@ in { lexid = callPackage ../development/python-modules/lexid { }; + lhapdf = toPythonModule (pkgs.lhapdf.override { + inherit python; + }); + libagent = callPackage ../development/python-modules/libagent { }; pa-ringbuffer = callPackage ../development/python-modules/pa-ringbuffer { }; @@ -3911,6 +4037,8 @@ in { libpurecool = callPackage ../development/python-modules/libpurecool { }; + libpyfoscam = callPackage ../development/python-modules/libpyfoscam { }; + libredwg = toPythonModule (pkgs.libredwg.override { enablePython = true; inherit (self) python libxml2; @@ -4043,6 +4171,8 @@ in { lml = callPackage ../development/python-modules/lml { }; + lmnotify = callPackage ../development/python-modules/lmnotify { }; + lmtpd = callPackage ../development/python-modules/lmtpd { }; localimport = callPackage ../development/python-modules/localimport { }; @@ -4111,15 +4241,7 @@ in { macropy = callPackage ../development/python-modules/macropy { }; - maestral = callPackage ../development/python-modules/maestral { - keyring = self.keyring.overridePythonAttrs (old: rec { - version = "22.0.1"; - src = old.src.override { - inherit version; - sha256 = "sha256-mss+FFLtu3VEgisS/SVFkHh2nlYPpR9Bi20Ar6pheN8="; - }; - }); - }; + maestral = callPackage ../development/python-modules/maestral { }; magic = callPackage ../development/python-modules/magic { }; @@ -4195,6 +4317,8 @@ in { mask-rcnn = callPackage ../development/python-modules/mask-rcnn { }; + mastodon-py = callPackage ../development/python-modules/mastodon-py { }; + mat2 = callPackage ../development/python-modules/mat2 { }; matchpy = callPackage ../development/python-modules/matchpy { }; @@ -4206,6 +4330,8 @@ in { inherit (pkgs.darwin.apple_sdk.frameworks) Cocoa; }; + matplotlib-inline = callPackage ../development/python-modules/matplotlib-inline { }; + matrix-api-async = callPackage ../development/python-modules/matrix-api-async { }; matrix-client = callPackage ../development/python-modules/matrix-client { }; @@ -4284,8 +4410,12 @@ in { mesonpep517 = callPackage ../development/python-modules/mesonpep517 { }; + metakernel = callPackage ../development/python-modules/metakernel { }; + metar = callPackage ../development/python-modules/metar { }; + meteoalertapi = callPackage ../development/python-modules/meteoalertapi { }; + mezzanine = callPackage ../development/python-modules/mezzanine { }; micawber = callPackage ../development/python-modules/micawber { }; @@ -4298,6 +4428,10 @@ in { milksnake = callPackage ../development/python-modules/milksnake { }; + millheater = callPackage ../development/python-modules/millheater { }; + + miniaudio = callPackage ../development/python-modules/miniaudio { }; + minidb = callPackage ../development/python-modules/minidb { }; minidump = callPackage ../development/python-modules/minidump { }; @@ -4338,6 +4472,11 @@ in { mlxtend = callPackage ../development/python-modules/mlxtend { }; + mlt = toPythonModule (pkgs.mlt.override { + inherit python; + enablePython = true; + }); + mmh3 = callPackage ../development/python-modules/mmh3 { }; mmpython = callPackage ../development/python-modules/mmpython { }; @@ -4421,6 +4560,8 @@ in { mpyq = callPackage ../development/python-modules/mpyq { }; + ms-cv = callPackage ../development/python-modules/ms-cv { }; + msal = callPackage ../development/python-modules/msal { }; msal-extensions = callPackage ../development/python-modules/msal-extensions { }; @@ -4559,6 +4700,8 @@ in { ndjson = callPackage ../development/python-modules/ndjson { }; + ndms2-client = callPackage ../development/python-modules/ndms2-client { }; + ndspy = callPackage ../development/python-modules/ndspy { }; ndtypes = callPackage ../development/python-modules/ndtypes { }; @@ -4579,6 +4722,8 @@ in { netifaces = callPackage ../development/python-modules/netifaces { }; + nettigo-air-monitor = callPackage ../development/python-modules/nettigo-air-monitor { }; + networkx = callPackage ../development/python-modules/networkx { }; neuron-mpi = pkgs.neuron-mpi.override { inherit python; }; @@ -4591,6 +4736,8 @@ in { nexia = callPackage ../development/python-modules/nexia { }; + nextcloudmonitor = callPackage ../development/python-modules/nextcloudmonitor { }; + nghttp2 = (toPythonModule (pkgs.nghttp2.override { inherit (self) python cython setuptools; inherit (pkgs) ncurses; @@ -4701,6 +4848,8 @@ in { npyscreen = callPackage ../development/python-modules/npyscreen { }; + nsapi = callPackage ../development/python-modules/nsapi { }; + ntc-templates = callPackage ../development/python-modules/ntc-templates { }; ntlm-auth = callPackage ../development/python-modules/ntlm-auth { }; @@ -5062,8 +5211,6 @@ in { pg8000 = callPackage ../development/python-modules/pg8000 { }; - pg8000_1_12 = callPackage ../development/python-modules/pg8000/1_12.nix { }; - pgcli = callPackage ../development/tools/database/pgcli { }; pglast = callPackage ../development/python-modules/pglast { }; @@ -5082,6 +5229,10 @@ in { phonenumbers = callPackage ../development/python-modules/phonenumbers { }; + openapi-core = callPackage ../development/python-modules/openapi-core { }; + + pdunehd = callPackage ../development/python-modules/pdunehd { }; + phonopy = callPackage ../development/python-modules/phonopy { }; phpserialize = callPackage ../development/python-modules/phpserialize { }; @@ -5152,26 +5303,64 @@ in { pkuseg = callPackage ../development/python-modules/pkuseg { }; + pmsensor = callPackage ../development/python-modules/pmsensor { }; + ppdeep = callPackage ../development/python-modules/ppdeep { }; + pyaehw4a1 = callPackage ../development/python-modules/pyaehw4a1 { }; + + pyatag = callPackage ../development/python-modules/pyatag { }; + + pycontrol4 = callPackage ../development/python-modules/pycontrol4 { }; + + pycoolmasternet-async = callPackage ../development/python-modules/pycoolmasternet-async { }; + + pyfireservicerota = callPackage ../development/python-modules/pyfireservicerota { }; + + pyflick = callPackage ../development/python-modules/pyflick { }; + + pygti = callPackage ../development/python-modules/pygti { }; + + pyheos = callPackage ../development/python-modules/pyheos { }; + + pyhiveapi = callPackage ../development/python-modules/pyhiveapi { }; + + pyisy = callPackage ../development/python-modules/pyisy { }; + + pykrakenapi = callPackage ../development/python-modules/pykrakenapi { }; + pynndescent = callPackage ../development/python-modules/pynndescent { }; + pynobo = callPackage ../development/python-modules/pynobo { }; + pynuki = callPackage ../development/python-modules/pynuki { }; pynws = callPackage ../development/python-modules/pynws { }; pynx584 = callPackage ../development/python-modules/pynx584 { }; + pyrogram = callPackage ../development/python-modules/pyrogram { }; + pysbd = callPackage ../development/python-modules/pysbd { }; pyshark = callPackage ../development/python-modules/pyshark { }; + pysiaalarm = callPackage ../development/python-modules/pysiaalarm { }; + + pysyncthru = callPackage ../development/python-modules/pysyncthru { }; + pytest-subprocess = callPackage ../development/python-modules/pytest-subprocess { }; python-codon-tables = callPackage ../development/python-modules/python-codon-tables { }; python-csxcad = callPackage ../development/python-modules/python-csxcad { }; + python-ecobee-api = callPackage ../development/python-modules/python-ecobee-api { }; + + python-izone = callPackage ../development/python-modules/python-izone { }; + + python-juicenet = callPackage ../development/python-modules/python-juicenet { }; + python-openems = callPackage ../development/python-modules/python-openems { }; python-openzwave-mqtt = callPackage ../development/python-modules/python-openzwave-mqtt { }; @@ -5323,8 +5512,6 @@ in { prison = callPackage ../development/python-modules/prison { }; - privacyidea = callPackage ../development/python-modules/privacyidea { }; - pyjwt1 = callPackage ../development/python-modules/pyjwt/1.nix { }; proboscis = callPackage ../development/python-modules/proboscis { }; @@ -5488,6 +5675,8 @@ in { pyasn1-modules = callPackage ../development/python-modules/pyasn1-modules { }; + pyathena = callPackage ../development/python-modules/pyathena { }; + pyatmo = callPackage ../development/python-modules/pyatmo { }; pyatspi = callPackage ../development/python-modules/pyatspi { }; @@ -5600,6 +5789,8 @@ in { pycrc = callPackage ../development/python-modules/pycrc { }; + pycritty = callPackage ../development/python-modules/pycritty { }; + pycron = callPackage ../development/python-modules/pycron { }; pycrypto = callPackage ../development/python-modules/pycrypto { }; @@ -5637,6 +5828,8 @@ in { pydenticon = callPackage ../development/python-modules/pydenticon { }; + pydes = callPackage ../development/python-modules/pydes { }; + py-desmume = callPackage ../development/python-modules/py-desmume { }; pydexcom = callPackage ../development/python-modules/pydexcom { }; @@ -5725,6 +5918,8 @@ in { pyflakes = callPackage ../development/python-modules/pyflakes { }; + pyflic = callPackage ../development/python-modules/pyflic { }; + pyflume = callPackage ../development/python-modules/pyflume { }; pyflunearyou = callPackage ../development/python-modules/pyflunearyou { }; @@ -5817,6 +6012,8 @@ in { pyhomematic = callPackage ../development/python-modules/pyhomematic { }; + pyhomepilot = callPackage ../development/python-modules/pyhomepilot { }; + pyhs100 = callPackage ../development/python-modules/pyhs100 { }; pyi2cflash = callPackage ../development/python-modules/pyi2cflash { }; @@ -5839,6 +6036,8 @@ in { pyintesishome = callPackage ../development/python-modules/pyintesishome { }; + pyipma = callPackage ../development/python-modules/pyipma { }; + pyipp = callPackage ../development/python-modules/pyipp { }; pyiqvia = callPackage ../development/python-modules/pyiqvia { }; @@ -5873,6 +6072,8 @@ in { pykoplenti = callPackage ../development/python-modules/pykoplenti { }; + pykulersky = callPackage ../development/python-modules/pykulersky { }; + pykwalify = callPackage ../development/python-modules/pykwalify { }; pylacrosse = callPackage ../development/python-modules/pylacrosse { }; @@ -5895,8 +6096,6 @@ in { inherit (pkgs) libusb1; }; - pylibgen = throw "pylibgen is unmaintained upstreamed, and removed from nixpkgs"; # added 2020-06-20 - pyliblo = callPackage ../development/python-modules/pyliblo { }; pylibmc = callPackage ../development/python-modules/pylibmc { }; @@ -5975,6 +6174,8 @@ in { pymeteireann = callPackage ../development/python-modules/pymeteireann { }; + pymeteoclimatic = callPackage ../development/python-modules/pymeteoclimatic { }; + pymetno = callPackage ../development/python-modules/pymetno { }; pymitv = callPackage ../development/python-modules/pymitv { }; @@ -5993,8 +6194,6 @@ in { pymsgbox = callPackage ../development/python-modules/pymsgbox { }; - pymssql = throw "pymssql has been abandoned upstream."; # added 2020-05-04 - pymsteams = callPackage ../development/python-modules/pymsteams { }; py-multiaddr = callPackage ../development/python-modules/py-multiaddr { }; @@ -6110,12 +6309,16 @@ in { pypblib = callPackage ../development/python-modules/pypblib { }; + pypca = callPackage ../development/python-modules/pypca { }; + pypcap = callPackage ../development/python-modules/pypcap { }; pypck = callPackage ../development/python-modules/pypck { }; pypdf2 = callPackage ../development/python-modules/pypdf2 { }; + pypdf3 = callPackage ../development/python-modules/pypdf3 { }; + pypeg2 = callPackage ../development/python-modules/pypeg2 { }; pyperclip = callPackage ../development/python-modules/pyperclip { }; @@ -6160,9 +6363,7 @@ in { pyqt4 = callPackage ../development/python-modules/pyqt/4.x.nix { }; - pyqt5 = pkgs.libsForQt5.callPackage ../development/python-modules/pyqt/5.x.nix { - pythonPackages = self; - }; + pyqt5 = callPackage ../development/python-modules/pyqt/5.x.nix { }; pyqt5_with_qtmultimedia = self.pyqt5.override { withMultimedia = true; @@ -6248,8 +6449,6 @@ in { pyro-ppl = callPackage ../development/python-modules/pyro-ppl { }; - pyroon = callPackage ../development/python-modules/pyroon { }; - pyroute2 = callPackage ../development/python-modules/pyroute2 { }; pyroute2-core = callPackage ../development/python-modules/pyroute2-core { }; @@ -6292,6 +6491,8 @@ in { inherit (pkgs.darwin.apple_sdk.frameworks) PCSC; }; + pyscf = callPackage ../development/python-modules/pyscf { }; + pyschedule = callPackage ../development/python-modules/pyschedule { }; pyscreenshot = callPackage ../development/python-modules/pyscreenshot { }; @@ -6362,6 +6563,8 @@ in { pysmi = callPackage ../development/python-modules/pysmi { }; + pysml = callPackage ../development/python-modules/pysml { }; + pysmt = callPackage ../development/python-modules/pysmt { }; pysnmp = callPackage ../development/python-modules/pysnmp { }; @@ -6394,6 +6597,8 @@ in { pyspinel = callPackage ../development/python-modules/pyspinel { }; + pyspnego = callPackage ../development/python-modules/pyspnego { }; + pyspotify = callPackage ../development/python-modules/pyspotify { }; pysptk = callPackage ../development/python-modules/pysptk { }; @@ -6592,9 +6797,6 @@ in { pytest-pep257 = callPackage ../development/python-modules/pytest-pep257 { }; - pytest-pep8 = self.pytestpep8; # added 2021-01-04 - pytestpep8 = throw "pytestpep8 was removed because it is abandoned and no longer compatible with pytest v6.0"; # added 2020-12-10 - pytest-pylint = callPackage ../development/python-modules/pytest-pylint { }; pytest-pythonpath = callPackage ../development/python-modules/pytest-pythonpath { }; @@ -6724,10 +6926,10 @@ in { python-engineio = callPackage ../development/python-modules/python-engineio { }; - python-engineio_3 = callPackage ../development/python-modules/python-engineio/3.nix { }; - python-etcd = callPackage ../development/python-modules/python-etcd { }; + python-ethtool = callPackage ../development/python-modules/python-ethtool { }; + python_fedora = callPackage ../development/python-modules/python_fedora { }; python-fontconfig = callPackage ../development/python-modules/python-fontconfig { }; @@ -6772,8 +6974,12 @@ in { python-Levenshtein = callPackage ../development/python-modules/python-levenshtein { }; + python-linux-procfs = callPackage ../development/python-modules/python-linux-procfs { }; + python-logstash = callPackage ../development/python-modules/python-logstash { }; + python-louvain = callPackage ../development/python-modules/python-louvain { }; + python-ly = callPackage ../development/python-modules/python-ly { }; python-lz4 = callPackage ../development/python-modules/python-lz4 { }; @@ -6872,8 +7078,6 @@ in { python-socketio = callPackage ../development/python-modules/python-socketio { }; - python-socketio_4 = callPackage ../development/python-modules/python-socketio/4.nix { }; - python-socks = callPackage ../development/python-modules/python-socks { }; python-sql = callPackage ../development/python-modules/python-sql { }; @@ -6916,6 +7120,8 @@ in { pyeverlights = callPackage ../development/python-modules/pyeverlights { }; + pytibber = callPackage ../development/python-modules/pytibber { }; + pytile = callPackage ../development/python-modules/pytile { }; pytimeparse = callPackage ../development/python-modules/pytimeparse { }; @@ -6946,6 +7152,8 @@ in { cudaSupport = false; }; + pytradfri = callPackage ../development/python-modules/pytradfri { }; + pytrafikverket = callPackage ../development/python-modules/pytrafikverket { }; pytrends = callPackage ../development/python-modules/pytrends { }; @@ -7009,6 +7217,8 @@ in { pyvicare = callPackage ../development/python-modules/pyvicare { }; + pyvis = callPackage ../development/python-modules/pyvis { }; + pyvisa = callPackage ../development/python-modules/pyvisa { }; pyvisa-py = callPackage ../development/python-modules/pyvisa-py { }; @@ -7075,14 +7285,14 @@ in { pyyaml = callPackage ../development/python-modules/pyyaml { }; + pyyaml-env-tag = callPackage ../development/python-modules/pyyaml-env-tag { }; + pyzerproc = callPackage ../development/python-modules/pyzerproc { }; pyzmq = callPackage ../development/python-modules/pyzmq { }; pyzufall = callPackage ../development/python-modules/pyzufall { }; - qasm2image = throw "qasm2image is no longer maintained (since November 2018), and is not compatible with the latest pythonPackages.qiskit versions."; # added 2020-12-09 - qcelemental = callPackage ../development/python-modules/qcelemental { }; qcengine = callPackage ../development/python-modules/qcengine { }; @@ -7194,6 +7404,8 @@ in { readchar = callPackage ../development/python-modules/readchar { }; + readlike = callPackage ../development/python-modules/readlike { }; + readme = callPackage ../development/python-modules/readme { }; readme_renderer = callPackage ../development/python-modules/readme_renderer { }; @@ -7232,6 +7444,8 @@ in { rencode = callPackage ../development/python-modules/rencode { }; + reparser = callPackage ../development/python-modules/reparser { }; + repeated_test = callPackage ../development/python-modules/repeated_test { }; repocheck = callPackage ../development/python-modules/repocheck { }; @@ -7320,6 +7534,8 @@ in { rfcat = callPackage ../development/python-modules/rfcat { }; + rflink = callPackage ../development/python-modules/rflink { }; + rich = callPackage ../development/python-modules/rich { }; rig = callPackage ../development/python-modules/rig { }; @@ -7380,6 +7596,8 @@ in { roombapy = callPackage ../development/python-modules/roombapy { }; + roonapi = callPackage ../development/python-modules/roonapi { }; + ronin = callPackage ../development/python-modules/ronin { }; rope = callPackage ../development/python-modules/rope { }; @@ -7439,6 +7657,8 @@ in { runway-python = callPackage ../development/python-modules/runway-python { }; + ruyaml = callPackage ../development/python-modules/ruyaml { }; + rx = callPackage ../development/python-modules/rx { }; rxv = callPackage ../development/python-modules/rxv { }; @@ -7533,26 +7753,6 @@ in { scikit-tda = callPackage ../development/python-modules/scikit-tda { }; - scipy_1_3 = self.scipy.overridePythonAttrs (oldAttrs: rec { - version = "1.3.3"; - src = oldAttrs.src.override { - inherit version; - sha256 = "02iqb7ws7fw5fd1a83hx705pzrw1imj7z0bphjsl4bfvw254xgv4"; - }; - doCheck = false; - disabled = !isPy3k; - }); - - scipy_1_4 = self.scipy.overridePythonAttrs (oldAttrs: rec { - version = "1.4.1"; - src = oldAttrs.src.override { - inherit version; - sha256 = "0ndw7zyxd2dj37775mc75zm4fcyiipnqxclc45mkpxy8lvrvpqfy"; - }; - doCheck = false; - disabled = !isPy3k; - }); - scipy = callPackage ../development/python-modules/scipy { }; scour = callPackage ../development/python-modules/scour { }; @@ -7599,8 +7799,6 @@ in { selectors2 = callPackage ../development/python-modules/selectors2 { }; - selectors34 = callPackage ../development/python-modules/selectors34 { }; - selenium = callPackage ../development/python-modules/selenium { }; semantic-version = callPackage ../development/python-modules/semantic-version { }; @@ -7611,6 +7809,8 @@ in { sendgrid = callPackage ../development/python-modules/sendgrid { }; + sense-energy = callPackage ../development/python-modules/sense-energy { }; + sentencepiece = callPackage ../development/python-modules/sentencepiece { inherit (pkgs) sentencepiece; }; @@ -7700,6 +7900,8 @@ in { simanneal = callPackage ../development/python-modules/simanneal { }; + simber = callPackage ../development/python-modules/simber { }; + simpleaudio = callPackage ../development/python-modules/simpleaudio { }; simplebayes = callPackage ../development/python-modules/simplebayes { }; @@ -7784,14 +7986,14 @@ in { smartypants = callPackage ../development/python-modules/smartypants { }; + smbprotocol = callPackage ../development/python-modules/smbprotocol { }; + smbus-cffi = callPackage ../development/python-modules/smbus-cffi { }; smdebug-rulesconfig = callPackage ../development/python-modules/smdebug-rulesconfig { }; smhi-pkg = callPackage ../development/python-modules/smhi-pkg { }; - smmap2 = throw "smmap2 has been deprecated, use smmap instead."; # added 2020-03-14 - smmap = callPackage ../development/python-modules/smmap { }; smpplib = callPackage ../development/python-modules/smpplib { }; @@ -7850,6 +8052,8 @@ in { somajo = callPackage ../development/python-modules/somajo { }; + somecomfort = callPackage ../development/python-modules/somecomfort { }; + sopel = callPackage ../development/python-modules/sopel { }; sorl_thumbnail = callPackage ../development/python-modules/sorl_thumbnail { }; @@ -7898,6 +8102,8 @@ in { sphfile = callPackage ../development/python-modules/sphfile { }; + spiderpy = callPackage ../development/python-modules/spiderpy { }; + spinners = callPackage ../development/python-modules/spinners { }; sphinxcontrib-actdiag = callPackage ../development/python-modules/sphinxcontrib-actdiag { }; @@ -7980,12 +8186,8 @@ in { spyder = callPackage ../development/python-modules/spyder { }; - spyder_3 = callPackage ../development/python-modules/spyder/3.nix { }; - spyder-kernels = callPackage ../development/python-modules/spyder-kernels { }; - spyder-kernels_0_5 = callPackage ../development/python-modules/spyder-kernels/0.x.nix { }; - sqlalchemy = callPackage ../development/python-modules/sqlalchemy { }; sqlalchemy-citext = callPackage ../development/python-modules/sqlalchemy-citext { }; @@ -8016,6 +8218,8 @@ in { srp = callPackage ../development/python-modules/srp { }; + srpenergy = callPackage ../development/python-modules/srpenergy { }; + srptools = callPackage ../development/python-modules/srptools { }; srsly = callPackage ../development/python-modules/srsly { }; @@ -8046,6 +8250,8 @@ in { starkbank-ecdsa = callPackage ../development/python-modules/starkbank-ecdsa { }; + starline = callPackage ../development/python-modules/starline { }; + staticjinja = callPackage ../development/python-modules/staticjinja { }; statistics = callPackage ../development/python-modules/statistics { }; @@ -8064,6 +8270,8 @@ in { stone = callPackage ../development/python-modules/stone { }; + stopit = callPackage ../development/python-modules/stopit { }; + strategies = callPackage ../development/python-modules/strategies { }; stravalib = callPackage ../development/python-modules/stravalib { }; @@ -8152,6 +8360,8 @@ in { syncer = callPackage ../development/python-modules/syncer { }; + synologydsm-api = callPackage ../development/python-modules/synologydsm-api { }; + systembridge = callPackage ../development/python-modules/systembridge { }; systemd = callPackage ../development/python-modules/systemd { @@ -8311,6 +8521,8 @@ in { tflearn = callPackage ../development/python-modules/tflearn { }; + tgcrypto = callPackage ../development/python-modules/tgcrypto { }; + Theano = callPackage ../development/python-modules/Theano rec { cudaSupport = pkgs.config.cudaSupport or false; cudnnSupport = cudaSupport; @@ -8411,8 +8623,6 @@ in { toposort = callPackage ../development/python-modules/toposort { }; - topydo = throw "python3Packages.topydo was moved to topydo"; # 2017-09-22 - torchgpipe = callPackage ../development/python-modules/torchgpipe { }; torchvision = callPackage ../development/python-modules/torchvision { }; @@ -8427,6 +8637,8 @@ in { # Used by streamlit, graphite_beacon, 2021-01-29 tornado_5 = callPackage ../development/python-modules/tornado/5.nix { }; + total-connect-client = callPackage ../development/python-modules/total-connect-client { }; + towncrier = callPackage ../development/python-modules/towncrier { inherit (pkgs) git; }; @@ -8545,6 +8757,8 @@ in { txgithub = callPackage ../development/python-modules/txgithub { }; + txredisapi = callPackage ../development/python-modules/txredisapi { }; + txrequests = callPackage ../development/python-modules/txrequests { }; txtorcon = callPackage ../development/python-modules/txtorcon { }; @@ -8609,6 +8823,8 @@ in { u-msgpack-python = callPackage ../development/python-modules/u-msgpack-python { }; + unasync = callPackage ../development/python-modules/unasync { }; + uncertainties = callPackage ../development/python-modules/uncertainties { }; uncompyle6 = callPackage ../development/python-modules/uncompyle6 { }; @@ -8625,6 +8841,8 @@ in { unidecode = callPackage ../development/python-modules/unidecode { }; + unidic-lite = callPackage ../development/python-modules/unidic-lite { }; + unidiff = callPackage ../development/python-modules/unidiff { }; unifi = callPackage ../development/python-modules/unifi { }; @@ -8653,6 +8871,10 @@ in { upass = callPackage ../development/python-modules/upass { }; + upb-lib = callPackage ../development/python-modules/upb-lib { }; + + upcloud-api = callPackage ../development/python-modules/upcloud-api { }; + update_checker = callPackage ../development/python-modules/update_checker { }; update-copyright = callPackage ../development/python-modules/update-copyright { }; @@ -8755,6 +8977,10 @@ in { viewstate = callPackage ../development/python-modules/viewstate { }; + vilfo-api-client = callPackage ../development/python-modules/vilfo-api-client { }; + + vincenty = callPackage ../development/python-modules/vincenty { }; + vine = callPackage ../development/python-modules/vine { }; virtkey = callPackage ../development/python-modules/virtkey { }; @@ -8795,16 +9021,7 @@ in { vsure = callPackage ../development/python-modules/vsure { }; - vtk = self.vtk_7; - vtk_7 = toPythonModule (pkgs.vtk_7.override { - pythonInterpreter = python; - enablePython = true; - }); - vtk_8 = toPythonModule (pkgs.vtk_8.override { - pythonInterpreter = python; - enablePython = true; - }); - vtk_9 = toPythonModule (pkgs.vtk_9.override { + vtk = toPythonModule (pkgs.vtk.override { pythonInterpreter = python; enablePython = true; }); @@ -8827,6 +9044,8 @@ in { wakeonlan = callPackage ../development/python-modules/wakeonlan { }; + wallbox = callPackage ../development/python-modules/wallbox { }; + Wand = callPackage ../development/python-modules/Wand { }; warlock = callPackage ../development/python-modules/warlock { }; @@ -8875,13 +9094,15 @@ in { webhelpers = callPackage ../development/python-modules/webhelpers { }; + webargs = callPackage ../development/python-modules/webargs { }; + webob = callPackage ../development/python-modules/webob { }; weboob = callPackage ../development/python-modules/weboob { }; webrtcvad = callPackage ../development/python-modules/webrtcvad { }; - websocket_client = callPackage ../development/python-modules/websocket_client { }; + websocket-client = callPackage ../development/python-modules/websocket-client { }; websockets = callPackage ../development/python-modules/websockets { }; @@ -8891,6 +9112,8 @@ in { webtest = callPackage ../development/python-modules/webtest { }; + webtest-aiohttp = callPackage ../development/python-modules/webtest-aiohttp { }; + webthing = callPackage ../development/python-modules/webthing { }; werkzeug = callPackage ../development/python-modules/werkzeug { @@ -9000,6 +9223,8 @@ in { xattr = callPackage ../development/python-modules/xattr { }; + xbox-webapi = callPackage ../development/python-modules/xbox-webapi { }; + xboxapi = callPackage ../development/python-modules/xboxapi { }; xcffib = callPackage ../development/python-modules/xcffib { }; @@ -9068,6 +9293,8 @@ in { xstatic-pygments = callPackage ../development/python-modules/xstatic-pygments { }; + xtensor-python = callPackage ../development/python-modules/xtensor-python { }; + xvfbwrapper = callPackage ../development/python-modules/xvfbwrapper { inherit (pkgs.xorg) xorgserver; }; @@ -9123,6 +9350,8 @@ in { phantomjsSupport = false; }; + youtube-search = callPackage ../development/python-modules/youtube-search { }; + yowsup = callPackage ../development/python-modules/yowsup { }; yq = callPackage ../development/python-modules/yq { diff --git a/third_party/nixpkgs/pkgs/top-level/python2-packages.nix b/third_party/nixpkgs/pkgs/top-level/python2-packages.nix index bc37fd28db..32d9872b51 100644 --- a/third_party/nixpkgs/pkgs/top-level/python2-packages.nix +++ b/third_party/nixpkgs/pkgs/top-level/python2-packages.nix @@ -56,6 +56,8 @@ with self; with super; { cliapp = callPackage ../development/python-modules/cliapp { }; + click = callPackage ../development/python-modules/click/7.nix { }; + closure-linter = callPackage ../development/python-modules/closure-linter { }; cmdtest = callPackage ../development/python-modules/cmdtest { }; @@ -80,7 +82,7 @@ with self; with super; { django_evolution = callPackage ../development/python-modules/django_evolution { }; - dnspython = super.dnspython_1; + dnspython = callPackage ../development/python-modules/dnspython/1.nix { }; docker-py = disabled super.docker-py; @@ -98,6 +100,8 @@ with self; with super; { feedparser = callPackage ../development/python-modules/feedparser/5.nix { }; + flask = callPackage ../development/python-modules/flask/1.nix { }; + flask_ldap_login = callPackage ../development/python-modules/flask-ldap-login { }; flit = disabled super.flit; @@ -168,7 +172,7 @@ with self; with super; { http_signature = callPackage ../development/python-modules/http_signature { }; - hypothesis = super.hypothesis_4; + hypothesis = callPackage ../development/python-modules/hypothesis/2.nix { }; idna = callPackage ../development/python-modules/idna/2.nix { }; @@ -188,10 +192,14 @@ with self; with super; { isort = callPackage ../development/python-modules/isort/4.nix { }; + itsdangerous = callPackage ../development/python-modules/itsdangerous/1.nix { }; + jaraco_functools = callPackage ../development/python-modules/jaraco_functools/2.nix { }; jaraco_stream = callPackage ../development/python-modules/jaraco_stream/2.nix { }; + jinja2 = callPackage ../development/python-modules/jinja2/2.nix { }; + jsonrpclib = callPackage ../development/python-modules/jsonrpclib { }; jupyter_client = callPackage ../development/python-modules/jupyter_client/5.nix { }; @@ -256,6 +264,8 @@ with self; with super; { markdown = callPackage ../development/python-modules/markdown/3_1.nix { }; + markupsafe = callPackage ../development/python-modules/markupsafe/1.nix { }; + matplotlib = callPackage ../development/python-modules/matplotlib/2.nix { stdenv = if stdenv.isDarwin then pkgs.clangStdenv else pkgs.stdenv; inherit (pkgs.darwin.apple_sdk.frameworks) Cocoa; @@ -370,6 +380,8 @@ with self; with super; { pathpy = callPackage ../development/python-modules/path.py/2.nix { }; + pg8000 = callPackage ../development/python-modules/pg8000/1_12.nix { }; + pillow = callPackage ../development/python-modules/pillow/6.nix { inherit (pkgs) freetype libjpeg zlib libtiff libwebp tcl lcms2 tk; inherit (pkgs.xorg) libX11; @@ -510,6 +522,9 @@ with self; with super; { ruamel-ordereddict = self.ruamel_ordereddict; ruamel_ordereddict = callPackage ../development/python-modules/ruamel_ordereddict { }; + ruamel_yaml = self.ruamel-yaml; + ruamel-yaml = callPackage ../development/python-modules/ruamel_yaml/0.16.nix { }; + runsnakerun = callPackage ../development/python-modules/runsnakerun { }; rpm = disabled super.rpm; @@ -624,6 +639,8 @@ with self; with super; { wptserve = callPackage ../development/python-modules/wptserve { }; + werkzeug = callPackage ../development/python-modules/werkzeug/1.nix { }; + WSGIProxy = callPackage ../development/python-modules/wsgiproxy { }; wxPython30 = callPackage ../development/python-modules/wxPython/3.0.nix { diff --git a/third_party/nixpkgs/pkgs/top-level/release-haskell.nix b/third_party/nixpkgs/pkgs/top-level/release-haskell.nix index 7a3eb60838..87a08dddb6 100644 --- a/third_party/nixpkgs/pkgs/top-level/release-haskell.nix +++ b/third_party/nixpkgs/pkgs/top-level/release-haskell.nix @@ -175,6 +175,7 @@ let nix-tree nixfmt nota + nvfetcher ormolu pandoc pakcs @@ -199,6 +200,7 @@ let tldr-hs tweet-hs update-nix-fetchgit + uusi uqm uuagc vaultenv @@ -220,6 +222,7 @@ let # working as expected. cabal-install = all; Cabal_3_4_0_0 = with compilerNames; [ ghc884 ghc8104 ]; + cabal2nix-unstable = all; funcmp = all; # Doesn't currently work on ghc-9.0: # https://github.com/haskell/haskell-language-server/issues/297 diff --git a/third_party/nixpkgs/pkgs/top-level/release.nix b/third_party/nixpkgs/pkgs/top-level/release.nix index e62c3ecc19..e04b6e7e68 100644 --- a/third_party/nixpkgs/pkgs/top-level/release.nix +++ b/third_party/nixpkgs/pkgs/top-level/release.nix @@ -174,7 +174,8 @@ let # Lightweight distribution and test inherit (bootstrap) dist test; # Test a full stdenv bootstrap from the bootstrap tools definition - inherit (bootstrap.test-pkgs) stdenv; + # TODO re-enable with https://github.com/NixOS/nixpkgs/pull/126411 + # inherit (bootstrap.test-pkgs) stdenv; }; # Cross compiled bootstrap tools diff --git a/third_party/nixpkgs/pkgs/top-level/stage.nix b/third_party/nixpkgs/pkgs/top-level/stage.nix index 931ad1f01a..a7905d0db2 100644 --- a/third_party/nixpkgs/pkgs/top-level/stage.nix +++ b/third_party/nixpkgs/pkgs/top-level/stage.nix @@ -151,7 +151,7 @@ let otherPackageSets = self: super: { # This maps each entry in lib.systems.examples to its own package # set. Each of these will contain all packages cross compiled for - # that target system. For instance, pkgsCross.rasberryPi.hello, + # that target system. For instance, pkgsCross.raspberryPi.hello, # will refer to the "hello" package built for the ARM6-based # Raspberry Pi. pkgsCross = lib.mapAttrs (n: crossSystem: diff --git a/third_party/nixpkgs/pkgs/top-level/static.nix b/third_party/nixpkgs/pkgs/top-level/static.nix index 32559c0e79..0c9af250e8 100644 --- a/third_party/nixpkgs/pkgs/top-level/static.nix +++ b/third_party/nixpkgs/pkgs/top-level/static.nix @@ -50,14 +50,10 @@ self: super: let # ++ optional (super.stdenv.hostPlatform.libc == "glibc") ((flip overrideInStdenv) [ self.stdenv.glibc.static ]) ; - removeUnknownConfigureFlags = f: with self.lib; - remove "--disable-shared" - (remove "--enable-static" f); - ocamlFixPackage = b: b.overrideAttrs (o: { configurePlatforms = [ ]; - configureFlags = removeUnknownConfigureFlags (o.configureFlags or [ ]); + dontAddStaticConfigureFlags = true; buildInputs = o.buildInputs ++ o.nativeBuildInputs or [ ]; propagatedNativeBuildInputs = o.propagatedBuildInputs or [ ]; }); @@ -75,7 +71,8 @@ self: super: let preConfigure = '' configureFlagsArray+=("-cc" "$CC" "-as" "$AS" "-partialld" "$LD -r") ''; - configureFlags = (removeUnknownConfigureFlags o.configureFlags) ++ [ + dontAddStaticConfigureFlags = true; + configureFlags = [ "--no-shared-libs" "-host ${o.stdenv.hostPlatform.config}" "-target ${o.stdenv.targetPlatform.config}" @@ -124,11 +121,6 @@ in { if set ? overrideScope' then set.overrideScope' ocamlStaticAdapter else set ) super.ocaml-ng; - openssl = super.openssl_1_1.overrideAttrs (o: { - # OpenSSL doesn't like the `--enable-static` / `--disable-shared` flags. - configureFlags = (removeUnknownConfigureFlags o.configureFlags); - }); - perl = super.perl.override { # Don’t use new stdenv zlib because # it doesn’t like the --disable-shared flag